Phyre 2 alignment of P76339 with c3r3sD_

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Job Description | P76339
Confidence | 27.30% | Date | Thu Jan 5 12:21:56 GMT 2012
Rank | 86 | Aligned Residues | 23
% Identity | 22% | Template | c3r3sD_
PDB info | PDB header:oxidoreductase | Chain: D: PDB Molecule:oxidoreductase; | PDBTitle: structure of the ygha oxidoreductase from salmonella enterica
Resolution | 1.25 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 412 | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | S | V | G | Q | G | L | G | L | S | L | V | K | A | I | A | E | L | H | G | G | S | A | T | Y
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |
Template Sequence |  | G | G | D | S | G | I | G | R | A | A | A | I | A | Y | A | R | E | . | G | A | D | V | A | I
Template Known Secondary structure |  | T | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  | T | . | T |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 56 | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |  | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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