12 c3k9cA_ Probab=99.97   E-value=4.4e-28  Score=199.02  Aligned_columns=263  Identities=17%

Q ss_pred             EEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf             03565421467720689999999998513670799865888688888887775224433211355443124567875088
Q batch____        64 RAIGVLLPSLTNQVFAEVLRGIESVTDAHGYQTMLAHYGYKPEMEQERLESMLSWNIDGLILTERTHTPRTLKMIEVAGI  143 (331)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (331)
                      ++||++ +...++|+..+..+....+...++.+.+...... ..+......+....++++++...... ..........+
T Consensus         1 r~IGvi-~~~~~pf~~~l~~gi~~~a~~~g~~l~i~~~~~~-~~~~~~~~~l~~~~~dgiIi~~~~~~-~~~~~~~~~~i   77 (268)
T c3k9cA_           1 RLLGVV-FELQQPFHGDLVEQIYAAATRRGYDVXLSAVAPS-RAEKVAVQALXRERCEAAILLGTRFD-TDELGALADRV   77 (268)
T ss_dssp             CEEEEE-EETTCHHHHHHHHHHHHHHHHTTCEEEEEEEBTT-BCHHHHHHHHTTTTEEEEEEETCCCC-HHHHHHHHTTS
T ss_pred             CEEEEE-ECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCC-HHHHHHHHHHHHCCCCEEEEECCCCC-HHHHHHHHCCC
T ss_conf             969998-0589803899999999999986987999977995-79999999998469979999779887-57899997199


Q ss_pred             CEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCH
Q ss_conf             38998235786665358750320124667888746873135414887531799999999999985998860697268743
Q batch____       144 PVVELMDSKSPCLDIAVGFDNFEAARQMTTAIIARGHRHIAYLGARLDERTIIKQKGYEQAMLDAGLVPYSVMVEQSSSY  223 (331)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~g~~~~~~~~~~~~~~~~~~~~~~~  223 (331)
                      |++.++.........++..++...+..++..+...+++.+.+..+........|..||.+++.+++...........+..
T Consensus        78 pvV~~~~~~~~~~~~~v~~d~~~~~~~~~~~l~~~g~~~i~~~~~~~~~~~~~~~~gf~~~~~~~~~~~~~~~~~~~~~~  157 (268)
T c3k9cA_          78 PALVVARASGLPGVGAVRGDDVAGITLAVDHLTELGHRNIAHIDGADAPGGADRRAGFLAAXDRHGLSASATVVTGGTTE  157 (268)
T ss_dssp             CEEEESSCCSSTTSEEEEECHHHHHHHHHHHHHHTTCCSEEEECCTTSTTHHHHHHHHHHHHHHTTCGGGEEEECCCSSH
T ss_pred             CEEEECCCCCCEEEEEEEECHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCH
T ss_conf             69998388885023388667277521123358855994899987888814799999999998864987670698479998


Q ss_pred             HHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHCCCCCEEEECCHHHHHHHHHH
Q ss_conf             68999999997414886558761132330258999982899975289998566069972489710686499999999999
Q batch____       224 SSGIELIRQARREYPQLDGVFCTNDDLAVGAAFECQRLGLKVPDDMAIAGFHGHDIGQVMEPRLASVLTPRERMGSIGAE  303 (331)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~~~l~~~g~~vp~di~iig~d~~~~~~~~~p~ltti~~~~~~ig~~Av~  303 (331)
                      +........++...+.+++++|.+|..|.+++.++.+.|+++|+|++++|||+.+.+.+..|++|||+||+.++|+.|++
T Consensus       158 ~~~~~~~~~~l~~~~~~~ai~~~~d~~A~~~~~~l~~~g~~~p~di~v~g~~~~~~~~~~~p~lttv~~~~~~~g~~a~~  237 (268)
T c3k9cA_         158 TEGAEGXHTLLEXPTPPTAVVAFNDRCATGVLDLLVRSGRDVPADISVVGYDDSRLARIPHVQXTTISQDATHXAEAAVD  237 (268)
T ss_dssp             HHHHHHHHHHHTSSSCCSEEEESSHHHHHHHHHHHHHTTCCTTTTCEEEEEECCTTTTCTTTCCEEEECCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHCCCCCCEEECCHHHHHHHHHH
T ss_conf             99999999997138888717861565787899999984034731575216886478986599841576198999999999


Q ss_pred             HHHHHHCCCCCCCEEEEEEEEEEECCCC
Q ss_conf             9999982879997499993198856739
Q batch____       304 RLLARIRGESVTPKMLDLGFTLSPGGSI  331 (331)
Q Consensus       304 ~L~~~i~g~~~~~~~i~i~~~li~r~Sv  331 (331)
                      +|+++++|++  +..++++++||+|+|.
T Consensus       238 ~l~~~l~g~~--~~~~~i~~~Li~R~St  263 (268)
T c3k9cA_         238 GALAQISGDK--AVDLVLAPHLVRRATT  263 (268)
T ss_dssp             HHHHHHHTCC--CCEEEECCEEECCSSC
T ss_pred             HHHHHHCCCC--CCEEEEEEEEEECCCC
T ss_conf             9999974899--8518981089966723