Phyre 2 Results for P15723

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Email | l.a.kelley@imperial.ac.uk
Description | P15723
Date | Thu Jan 5 11:34:52 GMT 2012
Unique Job ID | 62d052af71b1f253

Summary |

Top model
Image coloured by rainbow N → C terminus
| Close Jmol

Model (left) based on template c3bg2A_
Top template information
PDB header:hydrolase Chain: A: PDB Molecule:dgtp triphosphohydrolase; PDBTitle: crystal structure of deoxyguanosinetriphosphate triphosphohydrolase2 from flavobacterium sp. med217
Confidence and coverage
Confidence: | 100.0% | Coverage: | 77%
387 residues ( 77% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in Jmol

Sequence analysis |

Secondary structure and disorder prediction |

|  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60
Sequence |  | M | A | Q | I | D | F | R | K | K | I | N | W | H | R | R | Y | R | S | P | Q | G | V | K | T | E | H | E | I | L | R | I | F | E | S | D | R | G | R | I | I | N | S | P | A | I | R | R | L | Q | Q | K | T | Q | V | F | P | L | E | R | N
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? | ? | ? | ? | ? | ? | ? | ? |  |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120
Sequence |  | A | A | V | R | T | R | L | T | H | S | M | E | V | Q | Q | V | G | R | Y | I | A | K | E | I | L | S | R | L | K | E | L | K | L | L | E | A | Y | G | L | D | E | L | T | G | P | F | E | S | I | V | E | M | S | C | L | M | H | D | I | G
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180
Sequence |  | N | P | P | F | G | H | F | G | E | A | A | I | N | D | W | F | R | Q | R | L | H | P | E | D | A | E | S | Q | P | L | T | D | D | R | C | S | V | A | A | L | R | L | R | D | G | E | E | P | L | N | E | L | R | R | K | I | R | Q | D | L
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? |  | ? | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240
Sequence |  | C | H | F | E | G | N | A | Q | G | I | R | L | V | H | T | L | M | R | M | N | L | T | W | A | Q | V | G | G | I | L | K | Y | T | R | P | A | W | W | R | G | E | T | P | E | T | H | H | Y | L | M | K | K | P | G | Y | Y | L | S | E | E
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300
Sequence |  | A | Y | I | A | R | L | R | K | E | L | N | L | A | L | Y | S | R | F | P | L | T | W | I | M | E | A | A | D | D | I | S | Y | C | V | A | D | L | E | D | A | V | E | K | R | I | F | T | V | E | Q | L | Y | H | H | L | H | E | A | W | G
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360
Sequence |  | Q | H | E | K | G | S | L | F | S | L | V | V | E | N | A | W | E | K | S | R | S | N | S | L | S | R | S | T | E | D | Q | F | F | M | Y | L | R | V | N | T | L | N | K | L | V | P | Y | A | A | Q | R | F | I | D | N | L | P | A | I | F
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420
Sequence |  | A | G | T | F | N | H | A | L | L | E | D | A | S | E | C | S | D | L | L | K | L | Y | K | N | V | A | V | K | H | V | F | S | H | P | D | V | E | R | L | E | L | Q | G | Y | R | V | I | S | G | L | L | E | I | Y | R | P | L | L | S | L
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480
Sequence |  | S | L | S | D | F | T | E | L | V | E | K | E | R | V | K | R | F | P | I | E | S | R | L | F | H | K | L | S | T | R | H | R | L | A | Y | V | E | A | V | S | K | L | P | S | D | S | P | E | F | P | L | W | E | Y | Y | Y | R | C | R | L
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? |  |  |  | ? |  |  |  |  |  |  |  |  | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? |  |  | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | .
Sequence |  | L | Q | D | Y | I | S | G | M | T | D | L | Y | A | W | D | E | Y | R | R | L | M | A | V | E | Q
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |

Confidence Key
High(9) |  |  |  |  |  |  |  |  |  |  | Low (0)

? | Disordered
| Alpha helix
| Beta strand

Domain analysis |

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank | Aligned region
--- | ---
1 |
| c3bg2A_ |

### PDB 3bg2 chain A

Region: 4 - 503
Aligned: 387
Modelled: 391
Confidence: 100.0%
Identity: 32%
PDB header:hydrolase
Chain: A: PDB Molecule:dgtp triphosphohydrolase;
PDBTitle: crystal structure of deoxyguanosinetriphosphate triphosphohydrolase2 from flavobacterium sp. med217

Phyre2
2 |
| c2pgsA_ |

### PDB 2pgs chain A

Region: 3 - 499
Aligned: 380
Modelled: 413
Confidence: 100.0%
Identity: 36%
PDB header:hydrolase
Chain: A: PDB Molecule:putative deoxyguanosinetriphosphate triphosphohydrolase;
PDBTitle: crystal structure of a putative deoxyguanosinetriphosphate2 triphosphohydrolase from pseudomonas syringae pv. phaseolicola 1448a

Phyre2
3 |
| c2dqbB_ |

### PDB 2dqb chain B

Region: 11 - 501
Aligned: 320
Modelled: 330
Confidence: 100.0%
Identity: 31%
PDB header:hydrolase, dna binding protein
Chain: B: PDB Molecule:deoxyguanosinetriphosphate triphosphohydrolase, putative;
PDBTitle: crystal structure of dntp triphosphohydrolase from thermus2 thermophilus hb8, which is homologous to dgtp triphosphohydrolase

Phyre2
4 |
| d2heka1 |

### PDB 2hek chain A domain 1

Region: 38 - 398
Aligned: 313
Modelled: 321
Confidence: 100.0%
Identity: 15%
Fold: HD-domain/PDEase-like
Superfamily: HD-domain/PDEase-like
Family: HD domain

Phyre2
5 |
| c2o6iA_ |

### PDB 2o6i chain A

Region: 38 - 414
Aligned: 211
Modelled: 219
Confidence: 99.9%
Identity: 22%
PDB header:hydrolase
Chain: A: PDB Molecule:hd domain protein;
PDBTitle: structure of an enterococcus faecalis hd domain phosphohydrolase

Phyre2
6 |
| d2o6ia1 |

### PDB 2o6i chain A domain 1

Region: 38 - 414
Aligned: 211
Modelled: 219
Confidence: 99.9%
Identity: 22%
Fold: HD-domain/PDEase-like
Superfamily: HD-domain/PDEase-like
Family: HD domain

Phyre2
7 |
| c3u1nC_ |

### PDB 3u1n chain C

Region: 38 - 321
Aligned: 223
Modelled: 243
Confidence: 99.9%
Identity: 21%
PDB header:hydrolase
Chain: C: PDB Molecule:sam domain and hd domain-containing protein 1;
PDBTitle: structure of the catalytic core of human samhd1

Phyre2
8 |
| c2q14A_ |

### PDB 2q14 chain A

Region: 38 - 502
Aligned: 262
Modelled: 277
Confidence: 99.9%
Identity: 24%
PDB header:hydrolase
Chain: A: PDB Molecule:phosphohydrolase;
PDBTitle: crystal structure of phosphohydrolase (bt4208) from bacteroides2 thetaiotaomicron vpi-5482 at 2.20 a resolution

Phyre2
9 |
| c3ccgA_ |

### PDB 3ccg chain A

Region: 66 - 136
Aligned: 52
Modelled: 52
Confidence: 97.9%
Identity: 29%
PDB header:hydrolase
Chain: A: PDB Molecule:hd superfamily hydrolase;
PDBTitle: crystal structure of predicted hd superfamily hydrolase involved in2 nad metabolism (np_347894.1) from clostridium acetobutylicum at 1.503 a resolution

Phyre2
10 |
| c3gw7A_ |

### PDB 3gw7 chain A

Region: 61 - 138
Aligned: 59
Modelled: 59
Confidence: 97.9%
Identity: 15%
PDB header:hydrolase
Chain: A: PDB Molecule:uncharacterized protein yedj;
PDBTitle: crystal structure of a metal-dependent phosphohydrolase2 with conserved hd domain (yedj) from escherichia coli in3 complex with nickel ions. northeast structural genomics4 consortium target er63

Phyre2
11 |
| c2ogiA_ |

### PDB 2ogi chain A

Region: 66 - 120
Aligned: 36
Modelled: 36
Confidence: 97.8%
Identity: 22%
PDB header:hydrolase
Chain: A: PDB Molecule:hypothetical protein sag1661;
PDBTitle: crystal structure of a putative metal dependent phosphohydrolase2 (sag1661) from streptococcus agalactiae serogroup v at 1.85 a3 resolution

Phyre2
12 |
| c2o08B_ |

### PDB 2o08 chain B

Region: 66 - 120
Aligned: 36
Modelled: 36
Confidence: 97.7%
Identity: 25%
PDB header:hydrolase
Chain: B: PDB Molecule:bh1327 protein;
PDBTitle: crystal structure of a putative hd superfamily hydrolase (bh1327) from2 bacillus halodurans at 1.90 a resolution

Phyre2
13 |
| d2qgsa1 |

### PDB 2qgs chain A domain 1

Region: 59 - 140
Aligned: 64
Modelled: 64
Confidence: 97.5%
Identity: 17%
Fold: HD-domain/PDEase-like
Superfamily: HD-domain/PDEase-like
Family: HD domain

Phyre2
14 |
| d2pq7a1 |

### PDB 2pq7 chain A domain 1

Region: 57 - 129
Aligned: 54
Modelled: 54
Confidence: 97.4%
Identity: 20%
Fold: HD-domain/PDEase-like
Superfamily: HD-domain/PDEase-like
Family: HD domain

Phyre2
15 |
| d3b57a1 |

### PDB 3b57 chain A domain 1

Region: 61 - 122
Aligned: 42
Modelled: 43
Confidence: 97.1%
Identity: 19%
Fold: HD-domain/PDEase-like
Superfamily: HD-domain/PDEase-like
Family: HD domain

Phyre2
16 |
| d3djba1 |

### PDB 3djb chain A domain 1

Region: 59 - 140
Aligned: 63
Modelled: 63
Confidence: 97.0%
Identity: 17%
Fold: HD-domain/PDEase-like
Superfamily: HD-domain/PDEase-like
Family: HD domain

Phyre2
17 |
| c3m1tA_ |

### PDB 3m1t chain A

Region: 68 - 279
Aligned: 126
Modelled: 127
Confidence: 96.9%
Identity: 25%
PDB header:hydrolase
Chain: A: PDB Molecule:putative phosphohydrolase;
PDBTitle: crystal structure of putative phosphohydrolase (yp_929327.1) from2 shewanella amazonensis sb2b at 1.62 a resolution

Phyre2
18 |
| d2pjqa1 |

### PDB 2pjq chain A domain 1

Region: 59 - 123
Aligned: 46
Modelled: 46
Confidence: 96.7%
Identity: 15%
Fold: HD-domain/PDEase-like
Superfamily: HD-domain/PDEase-like
Family: HD domain

Phyre2
19 |
| d3dtoa1 |

### PDB 3dto chain A domain 1

Region: 65 - 140
Aligned: 53
Modelled: 56
Confidence: 96.6%
Identity: 19%
Fold: HD-domain/PDEase-like
Superfamily: HD-domain/PDEase-like
Family: HD domain

Phyre2
20 |
| c3skdA_ |

### PDB 3skd chain A

Region: 42 - 140
Aligned: 89
Modelled: 99
Confidence: 95.7%
Identity: 20%
PDB header:hydrolase
Chain: A: PDB Molecule:putative uncharacterized protein tthb187;
PDBTitle: crystal structure of the thermus thermophilus cas3 hd domain in the2 presence of ni2+

Phyre2
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Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c3bg2A_ |
|  | 100.0 | 32 | PDB header:hydrolase Chain: A: PDB Molecule:dgtp triphosphohydrolase; PDBTitle: crystal structure of deoxyguanosinetriphosphate triphosphohydrolase2 from flavobacterium sp. med217
2 | c2pgsA_ |
|  | 100.0 | 36 | PDB header:hydrolase Chain: A: PDB Molecule:putative deoxyguanosinetriphosphate triphosphohydrolase; PDBTitle: crystal structure of a putative deoxyguanosinetriphosphate2 triphosphohydrolase from pseudomonas syringae pv. phaseolicola 1448a
3 | c2dqbB_ |
|  | 100.0 | 31 | PDB header:hydrolase, dna binding protein Chain: B: PDB Molecule:deoxyguanosinetriphosphate triphosphohydrolase, putative; PDBTitle: crystal structure of dntp triphosphohydrolase from thermus2 thermophilus hb8, which is homologous to dgtp triphosphohydrolase
4 | d2heka1 |
|  | 100.0 | 15 | Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:HD domain
5 | c2o6iA_ |
|  | 99.9 | 22 | PDB header:hydrolase Chain: A: PDB Molecule:hd domain protein; PDBTitle: structure of an enterococcus faecalis hd domain phosphohydrolase
6 | d2o6ia1 |
|  | 99.9 | 22 | Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:HD domain
7 | c3u1nC_ |
|  | 99.9 | 21 | PDB header:hydrolase Chain: C: PDB Molecule:sam domain and hd domain-containing protein 1; PDBTitle: structure of the catalytic core of human samhd1
8 | c2q14A_ |
|  | 99.9 | 24 | PDB header:hydrolase Chain: A: PDB Molecule:phosphohydrolase; PDBTitle: crystal structure of phosphohydrolase (bt4208) from bacteroides2 thetaiotaomicron vpi-5482 at 2.20 a resolution
9 | c3ccgA_ |
|  | 97.9 | 29 | PDB header:hydrolase Chain: A: PDB Molecule:hd superfamily hydrolase; PDBTitle: crystal structure of predicted hd superfamily hydrolase involved in2 nad metabolism (np_347894.1) from clostridium acetobutylicum at 1.503 a resolution
10 | c3gw7A_ |
|  | 97.9 | 15 | PDB header:hydrolase Chain: A: PDB Molecule:uncharacterized protein yedj; PDBTitle: crystal structure of a metal-dependent phosphohydrolase2 with conserved hd domain (yedj) from escherichia coli in3 complex with nickel ions. northeast structural genomics4 consortium target er63
11 | c2ogiA_ |
|  | 97.8 | 22 | PDB header:hydrolase Chain: A: PDB Molecule:hypothetical protein sag1661; PDBTitle: crystal structure of a putative metal dependent phosphohydrolase2 (sag1661) from streptococcus agalactiae serogroup v at 1.85 a3 resolution
12 | c2o08B_ |
|  | 97.7 | 25 | PDB header:hydrolase Chain: B: PDB Molecule:bh1327 protein; PDBTitle: crystal structure of a putative hd superfamily hydrolase (bh1327) from2 bacillus halodurans at 1.90 a resolution
13 | d2qgsa1 |
|  | 97.5 | 17 | Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:HD domain
14 | d2pq7a1 |
|  | 97.4 | 20 | Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:HD domain
15 | d3b57a1 |
|  | 97.1 | 19 | Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:HD domain
16 | d3djba1 |
|  | 97.0 | 17 | Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:HD domain
17 | c3m1tA_ |
|  | 96.9 | 25 | PDB header:hydrolase Chain: A: PDB Molecule:putative phosphohydrolase; PDBTitle: crystal structure of putative phosphohydrolase (yp_929327.1) from2 shewanella amazonensis sb2b at 1.62 a resolution
18 | d2pjqa1 |
|  | 96.7 | 15 | Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:HD domain
19 | d3dtoa1 |
|  | 96.6 | 19 | Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:HD domain
20 | c3skdA_ |
|  | 95.7 | 20 | PDB header:hydrolase Chain: A: PDB Molecule:putative uncharacterized protein tthb187; PDBTitle: crystal structure of the thermus thermophilus cas3 hd domain in the2 presence of ni2+
21 | c2ounA_ |
| not modelled | 95.3 | 20 | PDB header:hydrolase Chain: A: PDB Molecule:camp and camp-inhibited cgmp 3',5'-cyclic PDBTitle: crystal structure of pde10a2 in complex with amp
22 | d3dy8a1 |
| not modelled | 95.1 | 16 | Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:PDEase
23 | c3ecmA_ |
| not modelled | 95.1 | 28 | PDB header:hydrolase Chain: A: PDB Molecule:high affinity camp-specific and ibmx-insensitive PDBTitle: crystal structure of the unliganded pde8a catalytic domain
24 | c3i7aA_ |
| not modelled | 94.9 | 22 | PDB header:hydrolase Chain: A: PDB Molecule:putative metal-dependent phosphohydrolase; PDBTitle: crystal structure of putative metal-dependent phosphohydrolase2 (yp_926882.1) from shewanella amazonensis sb2b at 2.06 a resolution
25 | c1z1lA_ |
| not modelled | 94.9 | 19 | PDB header:hydrolase Chain: A: PDB Molecule:cgmp-dependent 3',5'-cyclic phosphodiesterase; PDBTitle: the crystal structure of the phosphodiesterase 2a catalytic2 domain
26 | c2o8hA_ |
| not modelled | 94.9 | 21 | PDB header:hydrolase Chain: A: PDB Molecule:phosphodiesterase-10a; PDBTitle: crystal structure of the catalytic domain of rat2 phosphodiesterase 10a
27 | c3qi4A_ |
| not modelled | 94.8 | 16 | PDB header:hydrolase Chain: A: PDB Molecule:high affinity cgmp-specific 3',5'-cyclic phosphodiesterase PDBTitle: crystal structure of pde9a(q453e) in complex with ibmx
28 | c2r8qA_ |
| not modelled | 94.8 | 19 | PDB header:hydrolase Chain: A: PDB Molecule:class i phosphodiesterase pdeb1; PDBTitle: structure of lmjpdeb1 in complex with ibmx
29 | c3ibjB_ |
| not modelled | 94.6 | 19 | PDB header:hydrolase Chain: B: PDB Molecule:cgmp-dependent 3',5'-cyclic phosphodiesterase; PDBTitle: x-ray structure of pde2a
30 | c1zklA_ |
| not modelled | 94.6 | 23 | PDB header:hydrolase Chain: A: PDB Molecule:high-affinity camp-specific 3',5'-cyclic PDBTitle: multiple determinants for inhibitor selectivity of cyclic2 nucleotide phosphodiesterases
31 | c3g3nA_ |
| not modelled | 94.6 | 23 | PDB header:hydrolase Chain: A: PDB Molecule:high affinity camp-specific 3',5'-cyclic PDBTitle: pde7a catalytic domain in complex with 3-(2,6-2 difluorophenyl)-2-(methylthio)quinazolin-4(3h)-one
32 | d1f0ja_ |
| not modelled | 94.5 | 16 | Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:PDEase
33 | d1tbfa_ |
| not modelled | 94.5 | 21 | Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:PDEase
34 | c1xozA_ |
| not modelled | 94.5 | 21 | PDB header:hydrolase Chain: A: PDB Molecule:cgmp-specific 3',5'-cyclic phosphodiesterase; PDBTitle: catalytic domain of human phosphodiesterase 5a in complex2 with tadalafil
35 | c3hc1A_ |
| not modelled | 94.4 | 29 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized hdod domain protein; PDBTitle: crystal structure of hdod domain protein with unknown function2 (np_953345.1) from geobacter sulfurreducens at 1.90 a resolution
36 | d1y2ka1 |
| not modelled | 94.2 | 21 | Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:PDEase
37 | d2h44a1 |
| not modelled | 94.2 | 18 | Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:PDEase
38 | c1xotB_ |
| not modelled | 93.8 | 16 | PDB header:hydrolase Chain: B: PDB Molecule:camp-specific 3',5'-cyclic phosphodiesterase 4b; PDBTitle: catalytic domain of human phosphodiesterase 4b in complex with2 vardenafil
39 | c3bjcA_ |
| not modelled | 93.7 | 18 | PDB header:hydrolase Chain: A: PDB Molecule:cgmp-specific 3',5'-cyclic phosphodiesterase; PDBTitle: crystal structure of the pde5a catalytic domain in complex2 with a novel inhibitor
40 | c2cqzA_ |
| not modelled | 93.6 | 21 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:177aa long hypothetical protein; PDBTitle: crystal structure of ph0347 protein from pyrococcus horikoshii ot3
41 | d1taza_ |
| not modelled | 93.5 | 14 | Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:PDEase
42 | d1ynba1 |
| not modelled | 93.3 | 14 | Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:HD domain
43 | c3kq5A_ |
| not modelled | 93.2 | 7 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical cytosolic protein; PDBTitle: crystal structure of an uncharacterized protein from coxiella burnetii
44 | d2paqa1 |
| not modelled | 92.5 | 23 | Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:HD domain
45 | c3memA_ |
| not modelled | 92.3 | 15 | PDB header:signaling protein Chain: A: PDB Molecule:putative signal transduction protein; PDBTitle: crystal structure of a putative signal transduction protein2 (maqu_0641) from marinobacter aquaeolei vt8 at 2.25 a resolution
46 | d1so2a_ |
| not modelled | 92.0 | 18 | Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:PDEase
47 | c3mzoA_ |
| not modelled | 91.3 | 15 | PDB header:hydrolase Chain: A: PDB Molecule:lin2634 protein; PDBTitle: crystal structure of a hd-domain phosphohydrolase (lin2634) from2 listeria innocua at 1.98 a resolution
48 | d1vqra_ |
| not modelled | 90.8 | 11 | Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:modified HD domain
49 | d1u6za1 |
| not modelled | 89.4 | 8 | Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:Ppx associated domain
50 | d1xx7a_ |
| not modelled | 87.0 | 26 | Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:HD domain
51 | c2floA_ |
| not modelled | 84.1 | 8 | PDB header:hydrolase Chain: A: PDB Molecule:exopolyphosphatase; PDBTitle: crystal structure of exopolyphosphatase (ppx) from e. coli o157:h7
52 | c3m5fA_ |
| not modelled | 83.4 | 20 | PDB header:hydrolase Chain: A: PDB Molecule:metal dependent phosphohydrolase; PDBTitle: structure of mj0384, a cas3 protein from methanocaldococcus jannaschii
53 | c3ljvA_ |
| not modelled | 81.7 | 18 | PDB header:transcription Chain: A: PDB Molecule:mmoq response regulator; PDBTitle: crystal structure of mmoq response regulator (fragment 29-302) from2 methylococcus capsulatus str. bath, northeast structural genomics3 consortium target mcr175m
54 | c3kh1B_ |
| not modelled | 79.6 | 25 | PDB header:hydrolase Chain: B: PDB Molecule:predicted metal-dependent phosphohydrolase; PDBTitle: crystal structure of predicted metal-dependent2 phosphohydrolase (zp_00055740.2) from magnetospirillum3 magnetotacticum ms-1 at 1.37 a resolution
55 | c3hi0B_ |
| not modelled | 79.1 | 18 | PDB header:hydrolase Chain: B: PDB Molecule:putative exopolyphosphatase; PDBTitle: crystal structure of putative exopolyphosphatase (17739545) from2 agrobacterium tumefaciens str. c58 (dupont) at 2.30 a resolution
56 | d2gz4a1 |
| not modelled | 69.0 | 20 | Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:HD domain
57 | c2zxqA_ |
| not modelled | 60.0 | 38 | PDB header:hydrolase Chain: A: PDB Molecule:endo-alpha-n-acetylgalactosaminidase; PDBTitle: crystal structure of endo-alpha-n-acetylgalactosaminidase2 from bifidobacterium longum (engbf)
58 | c3ecqA_ |
| not modelled | 57.5 | 25 | PDB header:hydrolase Chain: A: PDB Molecule:endo-alpha-n-acetylgalactosaminidase; PDBTitle: endo-alpha-n-acetylgalactosaminidase from streptococcus pneumoniae:2 semet structure
59 | d1vj7a1 |
| not modelled | 53.5 | 38 | Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:HD domain
60 | c1aqjB_ |
| not modelled | 47.6 | 71 | PDB header:methyltransferase Chain: B: PDB Molecule:adenine-n6-dna-methyltransferase taqi; PDBTitle: structure of adenine-n6-dna-methyltransferase taqi
61 | d2ar0a1 |
| not modelled | 46.6 | 71 | Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:N-6 DNA Methylase-like
62 | c1vj7B_ |
| not modelled | 45.6 | 39 | PDB header:hydrolase, transferase Chain: B: PDB Molecule:bifunctional rela/spot; PDBTitle: crystal structure of the bifunctional catalytic fragment of relseq,2 the rela/spot homolog from streptococcus equisimilis.
63 | d2okca1 |
| not modelled | 42.6 | 71 | Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:N-6 DNA Methylase-like
64 | c1g38A_ |
| not modelled | 42.2 | 71 | PDB header:transferase/dna Chain: A: PDB Molecule:modification methylase taqi; PDBTitle: adenine-specific methyltransferase m. taq i/dna complex
65 | c3khkA_ |
| not modelled | 41.8 | 57 | PDB header:dna binding protein Chain: A: PDB Molecule:type i restriction-modification system PDBTitle: crystal structure of type-i restriction-modification system2 methylation subunit (mm_0429) from methanosarchina mazei.
66 | d2f8la1 |
| not modelled | 38.9 | 43 | Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:N-6 DNA Methylase-like
67 | c3lkdB_ |
| not modelled | 36.7 | 43 | PDB header:transferase Chain: B: PDB Molecule:type i restriction-modification system PDBTitle: crystal structure of the type i restriction-modification2 system methyltransferase subunit from streptococcus3 thermophilus, northeast structural genomics consortium4 target sur80
68 | c3o5cA_ |
| not modelled | 33.1 | 32 | PDB header:oxidoreductase Chain: A: PDB Molecule:cytochrome c551 peroxidase; PDBTitle: cytochrome c peroxidase bccp of shewanella oneidensis
69 | d1eb7a2 |
| not modelled | 32.3 | 18 | Fold:Cytochrome c Superfamily:Cytochrome c Family:Di-heme cytochrome c peroxidase
70 | d1b4ub_ |
| not modelled | 30.3 | 14 | Fold:Phosphorylase/hydrolase-like Superfamily:LigB-like Family:LigB-like
71 | c3nr1A_ |
| not modelled | 29.2 | 16 | PDB header:hydrolase Chain: A: PDB Molecule:hd domain-containing protein 3; PDBTitle: a metazoan ortholog of spot hydrolyzes ppgpp and plays a role in2 starvation responses
72 | c3nqwB_ |
| not modelled | 28.7 | 29 | PDB header:hydrolase Chain: B: PDB Molecule:cg11900; PDBTitle: a metazoan ortholog of spot hydrolyzes ppgpp and plays a role in2 starvation responses
73 | d1iqca2 |
| not modelled | 25.9 | 29 | Fold:Cytochrome c Superfamily:Cytochrome c Family:Di-heme cytochrome c peroxidase
74 | c3ldgA_ |
| not modelled | 24.3 | 63 | PDB header:transferase Chain: A: PDB Molecule:putative uncharacterized protein smu.472; PDBTitle: crystal structure of smu.472, a putative methyltransferase complexed2 with sah
75 | c2c1uB_ |
| not modelled | 23.5 | 23 | PDB header:oxidoreductase Chain: B: PDB Molecule:di-haem cytochrome c peroxidase; PDBTitle: crystal structure of the di-haem cytochrome c peroxidase2 from paracoccus pantotrophus - oxidised form
76 | c1nh1A_ |
| not modelled | 23.2 | 27 | PDB header:avirulence protein Chain: A: PDB Molecule:avirulence b protein; PDBTitle: crystal structure of the type iii effector avrb from2 pseudomonas syringae.
77 | d1nh1a_ |
| not modelled | 23.2 | 27 | Fold:Antivirulence factor Superfamily:Antivirulence factor Family:Antivirulence factor
78 | c3oa8B_ |
| not modelled | 21.8 | 35 | PDB header:heme-binding protein/heme-binding protei Chain: B: PDB Molecule:soxx; PDBTitle: diheme soxax
79 | c2xzn3_ |
| not modelled | 21.5 | 8 | PDB header:ribosome Chain: 3: PDB Molecule:rps7e; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2
80 | c3k0bA_ |
| not modelled | 20.9 | 50 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:predicted n6-adenine-specific dna methylase; PDBTitle: crystal structure of a predicted n6-adenine-specific dna methylase2 from listeria monocytogenes str. 4b f2365
81 | c2jqqA_ |
| not modelled | 20.6 | 12 | PDB header:protein transport Chain: A: PDB Molecule:conserved oligomeric golgi complex subunit 2; PDBTitle: solution structure of saccharomyces cerevisiae conserved2 oligomeric golgi subunit 2 protein (cog2p)
82 | d1nmla2 |
| not modelled | 17.8 | 21 | Fold:Cytochrome c Superfamily:Cytochrome c Family:Di-heme cytochrome c peroxidase
83 | c3lduA_ |
| not modelled | 17.3 | 63 | PDB header:transferase Chain: A: PDB Molecule:putative methylase; PDBTitle: the crystal structure of a possible methylase from2 clostridium difficile 630.
84 | c1iqcB_ |
| not modelled | 17.3 | 21 | PDB header:oxidoreductase Chain: B: PDB Molecule:di-heme peroxidase; PDBTitle: crystal structure of di-heme peroxidase from nitrosomonas europaea
85 | c2kviA_ |
| not modelled | 17.2 | 13 | PDB header:rna binding protein Chain: A: PDB Molecule:nuclear polyadenylated rna-binding protein 3; PDBTitle: structure of nab3 rrm
86 | c2vhdB_ |
| not modelled | 16.4 | 18 | PDB header:oxidoreductase Chain: B: PDB Molecule:cytochrome c551 peroxidase; PDBTitle: crystal structure of the di-haem cytochrome c peroxidase2 from pseudomonas aeruginosa - mixed valence form
87 | c3p04B_ |
| not modelled | 16.3 | 25 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized bcr; PDBTitle: crystal structure of the bcr protein from corynebacterium glutamicum.2 northeast structural genomics consortium target cgr8
88 | c3p04A_ |
| not modelled | 16.1 | 25 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized bcr; PDBTitle: crystal structure of the bcr protein from corynebacterium glutamicum.2 northeast structural genomics consortium target cgr8
89 | c3zrgB_ |
| not modelled | 15.8 | 55 | PDB header:protein binding Chain: B: PDB Molecule:pexrd2 family secreted rxlr effector peptide, putative; PDBTitle: crystal structure of rxlr effector pexrd2 from phytophthora infestans
90 | c1ni3A_ |
| not modelled | 15.5 | 25 | PDB header:hydrolase Chain: A: PDB Molecule:ychf gtp-binding protein; PDBTitle: structure of the schizosaccharomyces pombe ychf gtpase
91 | d1wf2a_ |
| not modelled | 15.2 | 13 | Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD
92 | c2huoA_ |
| not modelled | 14.7 | 33 | PDB header:oxidoreductase Chain: A: PDB Molecule:inositol oxygenase; PDBTitle: crystal structure of mouse myo-inositol oxygenase in complex with2 substrate
93 | d3bxda1 |
| not modelled | 14.7 | 33 | Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:MioX-like
94 | d2ibna1 |
| not modelled | 14.1 | 33 | Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:MioX-like
95 | d1lghb_ |
| not modelled | 13.5 | 22 | Fold:Light-harvesting complex subunits Superfamily:Light-harvesting complex subunits Family:Light-harvesting complex subunits
96 | c1nmlA_ |
| not modelled | 13.2 | 21 | PDB header:oxidoreductase Chain: A: PDB Molecule:di-haem cytochrome c peroxidase; PDBTitle: di-haemic cytochrome c peroxidase from pseudomonas nautica 617, form2 in (ph 4.0)
97 | d2ovra1 |
| not modelled | 13.1 | 25 | Fold:Skp1 dimerisation domain-like Superfamily:Skp1 dimerisation domain-like Family:Skp1 dimerisation domain-like
98 | c3k6jA_ |
| not modelled | 13.1 | 12 | PDB header:oxidoreductase Chain: A: PDB Molecule:protein f01g10.3, confirmed by transcript evidence; PDBTitle: crystal structure of the dehydrogenase part of multifuctional enzyme 12 from c.elegans
99 | c3s1sA_ |
| not modelled | 12.5 | 43 | PDB header:hydrolase, transferase Chain: A: PDB Molecule:restriction endonuclease bpusi; PDBTitle: characterization and crystal structure of the type iig restriction2 endonuclease bpusi

Binding site prediction |

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group
Imperial College London
Lawrence Kelley, Benjamin Jefferys
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Terms and Conditions
Component software
Template detection: HHpred 1.51
Secondary structure prediction: Psi-pred 2.5
Disorder prediction: Disopred 2.4
Transmembrane prediction: Memsat_SVM
Multi-template modelling and ab initio: Poing 1.0