Phyre 2 alignment of P0A7D7 with d1z7me1

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Job Description | P0A7D7
Confidence | 4.18% | Date | Thu Jan 5 11:05:25 GMT 2012
Rank | 76 | Aligned Residues | 41
% Identity | 20% | Template | d1z7me1
SCOP info | Periplasmic binding protein-like II | Periplasmic binding protein-like II | Phosphate binding protein-like
Resolution | 2.90

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 43 | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | F | D | R | K | G | M | V | N | N | K | F | N | Y | F | I | M | S | K | L | A | E | A | G | I | P | T | Q | M | E | R | L | L | S | D | T | E | C | L | V | K | K | L | D | M | V | P | V | E | C | V | V | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  | . |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |
Template Conservation |  |  |  | . |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |
Template Sequence |  | I | T | . | K | G | R | I | Q | K | Q | . | . | . | . | V | T | K | L | L | E | N | A | D | Y | D | V | E | . | . | . | . | . | P | I | R | E | L | Q | I | K | T | K | D | D | L | Q | I | . | I | F | G | K
Template Known Secondary structure |  |  |  | . | T | T |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  | T | T | T |  |  |  |  | . | . | . | . | . |  |  |  |  | S |  |  |  |  | T | T | S |  |  |  | . |  |  |  |
Template Predicted Secondary structure |  |  |  | . |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 6 | . |  | . | . | 10 | . | . | . | . |  |  |  |  | . | . | . | . | . | 20 | . | . | . | . | . | . | . |  |  |  |  |  | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . |  | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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