Phyre 2 alignment of P0A7D7 with c3cegA_

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Job Description | P0A7D7
Confidence | 11.03% | Date | Thu Jan 5 11:05:25 GMT 2012
Rank | 23 | Aligned Residues | 56
% Identity | 13% | Template | c3cegA_
PDB info | PDB header:ligase | Chain: A: PDB Molecule:baculoviral iap repeat-containing protein 6; | PDBTitle: crystal structure of the ubc domain of baculoviral iap2 repeat-containing protein 6
Resolution | 2.01 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 89 | 90 | . | . | . | . | . |  |  |  |  |  | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . |  |  | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | V | E | C | V | V | R | N | . | . | . | . | . | R | A | A | G | S | L | V | K | R | L | G | I | E | E | G | I | E | L | N | P | P | L | F | D | L | F | L | K | N | D | A | . | . | M | H | D | P | M | V | N | E | S | Y | C | E | T | F | G | W | V | S
Query Conservation |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | X | K | V | L | I | T | G | P | A | D | T | P | Y | A | N | G | C | F | E | F | D | V | Y | F | P | Q | D | Y | P | S | S | P | P | L | V | N | L | E | T | T | G | G | H | S | V | R | F | N | P | N | L | Y | N | D | G | K | V | C | L | S | I | L | N
Template Known Secondary structure |  |  |  |  |  |  |  | B |  | T | T | S | T | T | B | T |  |  |  |  |  |  |  |  |  |  | T | T | T | T | T | S |  |  |  |  |  |  |  |  | S | T | T | T | T |  |  |  | B | T | T | B |  | T | T |  | B | B |  |  | G | G | G | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 4581 | . | . | . | . | . | . | . | . | 4590 | . | . | . | . | . | . | . | . | . | 4600 | . | . | . | . | . | . | . | . | . | 4610 | . | . | . | . | . | . | . | . | . | 4620 | . | . | . | . | . | . | . | . | . | 4630 | . | . | . | . | . | . | . | . | . | 4640 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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