34 d1yuba_ Probab=99.39   E-value=3.5e-13  Score=99.81  Aligned_columns=175  Identities=17%

Q ss_pred             CCCCCCCC-CCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEEECCHHH
Q ss_conf             00378532-63899999999733678874436212321899999999997303333343346765410114655179799
Q batch____       143 KSGAGQYF-TPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGT  221 (529)
Q Consensus       143 ~~~~Gqf~-TP~~i~~~mv~l~~~~~~~~I~DPacGsG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~G~Ei~~~~  221 (529)
                      +.+.||+| |.+.|++.|++.+.+.++++|+|..||+|.+.....+                    ....++|+|+|+.+
T Consensus         4 ~~k~gQnFl~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lT~~L~~--------------------~~~~v~aiEid~~l   63 (245)
T d1yuba_           4 NIKYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAK--------------------ISKQVTSIELDSHL   63 (245)
T ss_dssp             CCCSCCCBCCCTTTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHH--------------------HSSEEEESSSSCSS
T ss_pred             CCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHH--------------------HCCCEEEEECCHHH
T ss_conf             7653544377989999999965888788899977987389999986--------------------13954999359999


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf             99999999964875322346753478754566655677327996588786545210002556777442899999999717
Q batch____       222 RRLALMNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLH  301 (529)
Q Consensus       222 ~~la~~nl~l~g~~~~~~~~~~i~~~d~l~~~~~~~~~fD~Vi~NPPfg~~~~~~~~~~~~~~~~~~~~~Fi~~~l~~Lk  301 (529)
                      +..++.++..++       .-.+.++|.+..+. +...+|.|++|+||....                 .++.+.+.. .
T Consensus        64 ~~~l~~~~~~~~-------~~~ii~~D~l~~~~-~~~~~~~vv~NlPY~iss-----------------~il~~~l~~-~  117 (245)
T d1yuba_          64 FNLSSEKLKLNT-------RVTLIHQDILQFQF-PNKQRYKIVGNIPYHLST-----------------QIIKKVVFE-S  117 (245)
T ss_dssp             SSSSSCTTTTCS-------EEEECCSCCTTTTC-CCSSEEEEEEECCSSSCH-----------------HHHHHHHHH-C
T ss_pred             HHHHHHHCCCCC-------CEEEEECCHHCCCC-CCCCCCEEEEECCHHHHH-----------------HHHHHHHHC-C
T ss_conf             999997425689-------66999743210888-877833798408500013-----------------899999731-7


Q ss_pred             CCCEEEEEECCCHHCCCCCCCHHHHHHHH-CCEEEEEEECCCCCCCCC-CCEEEEEEEECCCCC
Q ss_conf             89789999417022147542058898852-275999973376656777-411799999558865
Q batch____       302 PGGRAAVVVPDNVLFEGGKGTDIRRDLMD-KCHLHTILRLPTGIFYAQ-GVKTNVLFFTKGTVA  363 (529)
Q Consensus       302 ~gG~~aiV~p~~~Lf~~~~~~~iR~~Ll~-~~~i~aii~LP~~~F~~~-~v~t~Il~l~k~~~~  363 (529)
                      +--.+.+++...+-.+-.+...--.-+.. -+.++.+...|...|.|. .|..+|+-|+++...
T Consensus       118 ~~~~~v~m~Qke~a~Rl~a~~g~lsv~~q~~~~~~~~~~v~~~~F~P~PkVdS~vi~l~~k~~~  181 (245)
T d1yuba_         118 RASDIYLIVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHTTD  181 (245)
T ss_dssp             CCEEEEEEEESSHHHHHHCGGGSHHHHTTTTBCCCEEEEECCTTSBSSCCSCEEEEEECBCSCS
T ss_pred             CCCEEEEEEEHHHHHHHHCCCCHHHHHHHHHCCEEEEEEECHHHCCCCCCCEEEEEEEEECCCC
T ss_conf             9322999854888775544886576744214031267964410064898612899999955888