08/01/2012 15:40:28 : INFO  : Run start: Sun Jan  8 15:40:26 GMT 2012
08/01/2012 15:40:36 : INFO  : Initialised job
08/01/2012 15:40:38 : INFO  : Renaming log file 'phyre2_20120108_154025.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/628bf467835c8b67/phyre_20120108_154025.log'
08/01/2012 15:40:40 : INFO  : Initialised job:
Sequence
>batch____
MDIISVALKRHSTKAFDASKKLTPEQAEQIKTLLQYSPSSTNSQPWHFIVASTEEGKARV
AKSAAGNYVFNERKMLDASHVVVFCAKTAMDDVWLKLVVDQEDADGHFATPEAKAANDKG
RKFFADMHRKDLHDDAEWMAKQVYLNVGNFLLGVAALGLDAVPIEGFDAAILDAEFGLKE
KGYTSLVVVPVGHHSVEDFNATLPKSRLPQNITLTEV

08/01/2012 15:40:42 : INFO  : Checked sequence
08/01/2012 15:40:47 : INFO  : Finding homologues with PSI-BLAST
08/01/2012 15:40:49 : INFO  : PSI-BLAST 3 iterations
08/01/2012 15:42:13 : INFO  : PSI-BLAST 5 iterations
08/01/2012 15:43:56 : INFO  : Finished PSI-BLAST
08/01/2012 15:43:59 : INFO  : Running Buildali to generate a3m file
08/01/2012 15:54:24 : INFO  : Converting to HMM
08/01/2012 15:54:28 : INFO  : Calibrating HMM
08/01/2012 15:54:44 : INFO  : Searching HMM database
08/01/2012 15:58:56 : INFO  : Finished buildali
08/01/2012 15:58:59 : INFO  : Predicting secondary structure
08/01/2012 15:59:12 : INFO  : Predicted secondary structure (PSI-Pred)
08/01/2012 15:59:14 : INFO  : Predicting Disordered regions
08/01/2012 15:59:20 : INFO  : Predicted Disorder (Disopred)
08/01/2012 15:59:23 : INFO  : Running memsat_svm check
08/01/2012 16:03:22 : INFO  : Running memsat_svm full
08/01/2012 16:13:15 : INFO  : Predicted Transmembrane (memsat_svm) ID '628bf467835c8b67'
08/01/2012 16:13:18 : INFO  : Initialising fold library search
08/01/2012 16:13:23 : INFO  : Initialised search input
08/01/2012 16:13:28 : INFO  : Building Ensemble models
08/01/2012 16:13:33 : INFO  : Building hh.d1ykia1.model.1.pdb
08/01/2012 16:13:59 : INFO  : Building d1ykia1.1.pdb
08/01/2012 16:14:22 : INFO  : Building d1kqba_.2.pdb
08/01/2012 16:14:44 : INFO  : Building d1vfra_.3.pdb
08/01/2012 16:15:06 : INFO  : Building c3of4A_.4.pdb
08/01/2012 16:15:29 : INFO  : Building c3ge6B_.5.pdb
08/01/2012 16:15:50 : INFO  : Building c3bemA_.6.pdb
08/01/2012 16:16:12 : INFO  : Building c3gbhC_.7.pdb
08/01/2012 16:16:33 : INFO  : Building c3gr3B_.8.pdb
08/01/2012 16:16:55 : INFO  : Building c3gagB_.9.pdb
08/01/2012 16:17:16 : INFO  : Building c2hayD_.10.pdb
08/01/2012 16:17:38 : INFO  : Building d1zcha1.11.pdb
08/01/2012 16:17:59 : INFO  : Building c3n2sD_.12.pdb
08/01/2012 16:18:20 : INFO  : Building d1noxa_.13.pdb
08/01/2012 16:18:42 : INFO  : Building d1f5va_.14.pdb
08/01/2012 16:19:03 : INFO  : Building c2wzvB_.15.pdb
08/01/2012 16:19:28 : INFO  : Building d2b67a1.16.pdb
08/01/2012 16:19:50 : INFO  : Building c3eofB_.17.pdb
08/01/2012 16:20:11 : INFO  : Building c3gh8A_.18.pdb
08/01/2012 16:20:32 : INFO  : Building d1bkja_.19.pdb
08/01/2012 16:20:53 : INFO  : Building c2h0uA_.20.pdb
08/01/2012 16:21:37 : INFO  : Finished HH model building
08/01/2012 16:21:39 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
08/01/2012 16:22:41 : INFO  : html domain output complete ID '628bf467835c8b67'
08/01/2012 17:04:54 : INFO  : Run end  : Sun Jan  8 17:04:53 GMT 2012
