BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (152 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q321Z7 UPF0266 membrane protein yobD n=138 Tax=Enteroba... 296 1e-79 UniRef50_A7MKF9 UPF0266 membrane protein ESA_01432 n=2 Tax=Enter... 201 5e-51 UniRef50_Q2NTC6 UPF0266 membrane protein SG1324 n=12 Tax=Enterob... 143 2e-33 UniRef50_D2TVV5 Putative uncharacterized protein n=1 Tax=Arsenop... 120 2e-26 UniRef50_B8DGI9 UPF0266 membrane protein LMHCC_1856 n=17 Tax=Lis... 97 1e-19 UniRef50_A0AGM5 UPF0266 membrane protein lwe0739 n=1 Tax=Listeri... 97 2e-19 UniRef50_Q9CMJ4 UPF0266 membrane protein PM0830 n=11 Tax=Pasteur... 93 3e-18 UniRef50_A7JUG5 Possible membrane protein n=4 Tax=Pasteurellacea... 92 5e-18 UniRef50_A6VMV6 Putative uncharacterized protein n=1 Tax=Actinob... 65 8e-10 UniRef50_UPI000190A7E3 hypothetical protein Salmonelentericaente... 62 5e-09 UniRef50_C8N928 Membrane protein n=1 Tax=Cardiobacterium hominis... 62 6e-09 UniRef50_UPI0001B42C02 hypothetical protein LmonF_07195 n=1 Tax=... 48 7e-05 >UniRef50_Q321Z7 UPF0266 membrane protein yobD n=138 Tax=Enterobacteriaceae RepID=YOBD_SHIBS Length = 158 Score = 296 bits (759), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 149/150 (99%), Positives = 150/150 (100%) Query: 1 MTITDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGRIDSVIFVGLIVILIYN 60 MTITDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGRIDSVIFVGLIVILIYN Sbjct: 1 MTITDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGRIDSVIFVGLIVILIYN 60 Query: 61 NVTNHGALITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFANVWIEYSRIKAMNLSEDG 120 NVTNHGALITTWLLSALALMGFYIFWIR+PKIIFKQKGFFFANVWIEYSRIKAMNLSEDG Sbjct: 61 NVTNHGALITTWLLSALALMGFYIFWIRIPKIIFKQKGFFFANVWIEYSRIKAMNLSEDG 120 Query: 121 VLVMQLEQRRLLIRVRNIDDLEKIYKLLVS 150 VLVMQLEQRRLLIRVRNIDDLEKIYKLLVS Sbjct: 121 VLVMQLEQRRLLIRVRNIDDLEKIYKLLVS 150 >UniRef50_A7MKF9 UPF0266 membrane protein ESA_01432 n=2 Tax=Enterobacteriaceae RepID=Y1432_ENTS8 Length = 152 Score = 201 bits (511), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 100/152 (65%), Positives = 127/152 (83%) Query: 1 MTITDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGRIDSVIFVGLIVILIYN 60 MT+TD VL++FI ALL +AIYDQ+ RR+G TLL +PLL+RGR DS+IF GL+ ILI+ Sbjct: 1 MTLTDGVLVIFIIALLGWAIYDQWGTERRHGKTLLRVPLLKRGRADSLIFTGLVAILIWQ 60 Query: 61 NVTNHGALITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFANVWIEYSRIKAMNLSEDG 120 NV +HGAL+TTWLL AL L+ Y+FWIR P+I FK++GFFFA W++Y+ IKAMNLSEDG Sbjct: 61 NVASHGALLTTWLLGALGLLAIYLFWIREPQIRFKREGFFFAGGWVKYNHIKAMNLSEDG 120 Query: 121 VLVMQLEQRRLLIRVRNIDDLEKIYKLLVSTQ 152 VLVMQL++RRLLIRV+NIDDLE+IY +V+ Q Sbjct: 121 VLVMQLDKRRLLIRVKNIDDLERIYHFIVNNQ 152 >UniRef50_Q2NTC6 UPF0266 membrane protein SG1324 n=12 Tax=Enterobacteriaceae RepID=Y1324_SODGM Length = 153 Score = 143 bits (360), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 77/153 (50%), Positives = 112/153 (73%), Gaps = 1/153 (0%) Query: 1 MTITDLVLILFIAALLAFAIYDQFIMPRR-NGPTLLAIPLLRRGRIDSVIFVGLIVILIY 59 MT+TD+ L++ I L FA++D+FI+ G T L +PL R+GR+D +IF+ L++IL+Y Sbjct: 1 MTVTDIGLVIMIVIALLFAVFDEFIVDYALRGKTRLRVPLRRQGRLDGLIFIVLLLILLY 60 Query: 60 NNVTNHGALITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFANVWIEYSRIKAMNLSED 119 N+T G ++T+ L+ L LM Y+ +IR P+++FK +GFF+ NV+I YSRIK MNLSED Sbjct: 61 KNITTDGKVMTSTLILFLGLMVIYLAYIRCPRMLFKTEGFFYGNVFINYSRIKNMNLSED 120 Query: 120 GVLVMQLEQRRLLIRVRNIDDLEKIYKLLVSTQ 152 G LV+ LE+R LLI+V +DDL+KIY LL+ Q Sbjct: 121 GYLVIDLEKRSLLIQVNKLDDLQKIYHLLIEIQ 153 >UniRef50_D2TVV5 Putative uncharacterized protein n=1 Tax=Arsenophonus nasoniae RepID=D2TVV5_9ENTR Length = 179 Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 69/152 (45%), Positives = 105/152 (69%) Query: 1 MTITDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGRIDSVIFVGLIVILIYN 60 M + ++VL + I +L +AIY++ I+ NG T L I L RR RID+VIF+ LI I+IY+ Sbjct: 28 MNMNNIVLTILILLMLTYAIYEELIVNLLNGKTKLKIKLRRRNRIDAVIFIILIAIVIYH 87 Query: 61 NVTNHGALITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFANVWIEYSRIKAMNLSEDG 120 N+ HG+ TT+LL L+ Y+ +IR PK+ FK KGF++ NV+I Y IK +NLS+DG Sbjct: 88 NIIQHGSQFTTYLLMITVLIAIYLTFIRYPKLYFKDKGFYYNNVYILYDHIKTINLSKDG 147 Query: 121 VLVMQLEQRRLLIRVRNIDDLEKIYKLLVSTQ 152 +L++ L +R++ I V+ DDL+KIY L++ + Sbjct: 148 ILIVGLAKRKIYIAVKQFDDLDKIYNFLLNNK 179 >UniRef50_B8DGI9 UPF0266 membrane protein LMHCC_1856 n=17 Tax=Listeria RepID=Y1856_LISMH Length = 155 Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 54/140 (38%), Positives = 88/140 (62%), Gaps = 3/140 (2%) Query: 8 LILFIAALLA--FAIYDQFIMPRRNGPTLLAIPLLRRGRIDSVIFVGLIVIL-IYNNVTN 64 + LF A +L + +Y+ ++P G T+L++ L RGR D IFVG+IV+L + N Sbjct: 8 IFLFAANILTVLYILYNDAVIPLWKGKTVLSVKLRSRGRWDGYIFVGIIVLLFVSNTFFR 67 Query: 65 HGALITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFANVWIEYSRIKAMNLSEDGVLVM 124 G T+ LL + ++ YI + R K +FK+ G F+A ++ Y++I+ MNLSEDGVLV+ Sbjct: 68 EGPFSTSVLLGIMGVLFIYICFFRSSKAVFKESGLFYALLFFPYAKIERMNLSEDGVLVI 127 Query: 125 QLEQRRLLIRVRNIDDLEKI 144 + ++RL++ R+ DLEK+ Sbjct: 128 ETNRQRLMLFARSEKDLEKM 147 >UniRef50_A0AGM5 UPF0266 membrane protein lwe0739 n=1 Tax=Listeria welshimeri serovar 6b str. SLCC5334 RepID=Y739_LISW6 Length = 155 Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 50/128 (39%), Positives = 82/128 (64%), Gaps = 1/128 (0%) Query: 18 FAIYDQFIMPRRNGPTLLAIPLLRRGRIDSVIFVGLIVIL-IYNNVTNHGALITTWLLSA 76 + +Y+ ++P G T+L + L RGR D IFVG+I +L I N G +T+ LL+ Sbjct: 20 YILYNDAVIPLWKGKTVLTVKLRSRGRWDGYIFVGIIALLFISNTFFREGPQLTSILLAV 79 Query: 77 LALMGFYIFWIRVPKIIFKQKGFFFANVWIEYSRIKAMNLSEDGVLVMQLEQRRLLIRVR 136 + ++ YI + R K +FK+ G F+A ++ YS+I+ MNLSEDG+LV++ ++RL++ R Sbjct: 80 MGILFIYICFFRSSKAVFKETGLFYALLFFPYSKIERMNLSEDGILVIETNRQRLMLFAR 139 Query: 137 NIDDLEKI 144 + DLEK+ Sbjct: 140 SEKDLEKM 147 >UniRef50_Q9CMJ4 UPF0266 membrane protein PM0830 n=11 Tax=Pasteurellaceae RepID=Y830_PASMU Length = 152 Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 57/145 (39%), Positives = 92/145 (63%), Gaps = 2/145 (1%) Query: 1 MTITDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGRIDSVIFVGLIVILIYN 60 M I +++L L I L +A YDQF M G TLL + L ++G+ D++IF LI I+IY Sbjct: 1 MMIINVLLCLGIFCFLLYAFYDQFFMDCWKGKTLLKVHLKKQGQKDALIFSLLIGIIIYQ 60 Query: 61 NVTNHGALITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFANVWIEYSRIKAMNLSEDG 120 TN + T +LL+AL L+ Y +IR P ++ K+KGFFF N++ +Y+ I +NL+E+ Sbjct: 61 TYTNLSS-ATLYLLTALILLSVYAAFIRAPMLLLKEKGFFFGNIYFQYADIHQVNLAENN 119 Query: 121 VLVMQLEQ-RRLLIRVRNIDDLEKI 144 +LV+ ++ +RLL+ + D E++ Sbjct: 120 ILVIDMKNGKRLLVHLLTDQDREQV 144 >UniRef50_A7JUG5 Possible membrane protein n=4 Tax=Pasteurellaceae RepID=A7JUG5_PASHA Length = 161 Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 52/132 (39%), Positives = 79/132 (59%), Gaps = 5/132 (3%) Query: 18 FAIYDQFIMPRRNGPTLLAIPLLRRGRIDSVIFVGLIVILIYNNVTNHGALITTWLLSAL 77 FAIYDQ M + G TLL I L ++ ID+ + +GLIV+ I V N T +LL+ Sbjct: 16 FAIYDQVFMHKLKGTTLLEIRLKKQKTIDTWLLIGLIVLSISYGVQNQIQPFTLYLLATC 75 Query: 78 ALMGFYIFWIRVPKIIFKQKGFFFANVWIEYSRIKAMNLSE----DGVLVMQLEQ-RRLL 132 ++ Y+ + R P+++ KQ GFFFANV+ Y +I +N++E + +LV+ L RRLL Sbjct: 76 IILSVYLAFFRSPRLLLKQHGFFFANVFFNYDKIYQVNIAEGKADEKILVIDLHSGRRLL 135 Query: 133 IRVRNIDDLEKI 144 V N +DL+ + Sbjct: 136 AYVENAEDLQPV 147 >UniRef50_A6VMV6 Putative uncharacterized protein n=1 Tax=Actinobacillus succinogenes 130Z RepID=A6VMV6_ACTSZ Length = 150 Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 52/147 (35%), Positives = 87/147 (59%), Gaps = 6/147 (4%) Query: 5 DLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGRIDSVIFVGLIVILIYNNVTN 64 + +LIL I A A+A ++QF + R G T L + L +R ++DS+IF+ LI I+I+ + Sbjct: 3 NTLLILSIVAYFAYAFFEQFGIDRLKGKTHLKVRLKKRTKLDSLIFIALIGIIIWQS--- 59 Query: 65 HGAL--ITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFANVWIEYSRIKAMNLSEDGVL 122 G + T +LL L L+ Y + R P ++ K GFFF N++I + +I A+NL+ D L Sbjct: 60 EGQIEPFTLYLLGFLILLSLYTAFFRTPMLVIKHNGFFFENIFITFDKIHAINLANDYKL 119 Query: 123 VMQLEQ-RRLLIRVRNIDDLEKIYKLL 148 V L+ +R++ ++ N D + + LL Sbjct: 120 VFDLKNGKRMIAQLTNRADTDAVVALL 146 >UniRef50_UPI000190A7E3 hypothetical protein Salmonelentericaenterica_07056 n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. 404ty RepID=UPI000190A7E3 Length = 58 Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 30/31 (96%), Positives = 30/31 (96%) Query: 113 AMNLSEDGVLVMQLEQRRLLIRVRNIDDLEK 143 MNLSEDGVLVMQLEQRRLLIRVRNIDDLEK Sbjct: 1 EMNLSEDGVLVMQLEQRRLLIRVRNIDDLEK 31 >UniRef50_C8N928 Membrane protein n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N928_9GAMM Length = 165 Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 52/151 (34%), Positives = 69/151 (45%), Gaps = 3/151 (1%) Query: 3 ITDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGRIDSVIFVGLIVILIYNNV 62 +T L L L LA+ YD + RR G TL A+ L RR D+V +I Y + Sbjct: 2 LTTLGLWLLNLGYLAYLTYDIAVQSRRGGATLTAVRLRRRA-ADAVFLAVIIAAGFYYEI 60 Query: 63 TNHGALITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFANVWIEYSRIKAMNLSEDGVL 122 + H AL L+ R PK K+ GF + YS I AM LSEDGVL Sbjct: 61 S-HDRTPANLAALALLLLLVLGAGFRYPKWRLKKDGFTAGGRYWPYSAITAMRLSEDGVL 119 Query: 123 VMQLE-QRRLLIRVRNIDDLEKIYKLLVSTQ 152 V+ L + L++ V IDDLE+ + Sbjct: 120 VLTLTGGQNLILPVARIDDLEQAAAFFTGEE 150 >UniRef50_UPI0001B42C02 hypothetical protein LmonF_07195 n=1 Tax=Listeria monocytogenes FSL F2-515 RepID=UPI0001B42C02 Length = 103 Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 24/56 (42%), Positives = 37/56 (66%) Query: 89 VPKIIFKQKGFFFANVWIEYSRIKAMNLSEDGVLVMQLEQRRLLIRVRNIDDLEKI 144 V K+ K FF A ++ Y++I+ MNLSEDGVLV++ ++RL++ R+ LEK Sbjct: 31 VRKLFSKNPDFFIALLFFPYAKIERMNLSEDGVLVIETNRQRLMLFARSEKXLEKC 86 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A7MKF9 UPF0266 membrane protein ESA_01432 n=2 Tax=Enter... 170 9e-42 UniRef50_Q321Z7 UPF0266 membrane protein yobD n=138 Tax=Enteroba... 168 7e-41 UniRef50_Q2NTC6 UPF0266 membrane protein SG1324 n=12 Tax=Enterob... 142 3e-33 UniRef50_B8DGI9 UPF0266 membrane protein LMHCC_1856 n=17 Tax=Lis... 141 4e-33 UniRef50_A0AGM5 UPF0266 membrane protein lwe0739 n=1 Tax=Listeri... 140 1e-32 UniRef50_Q9CMJ4 UPF0266 membrane protein PM0830 n=11 Tax=Pasteur... 138 5e-32 UniRef50_D2TVV5 Putative uncharacterized protein n=1 Tax=Arsenop... 136 1e-31 UniRef50_A7JUG5 Possible membrane protein n=4 Tax=Pasteurellacea... 135 4e-31 UniRef50_C8N928 Membrane protein n=1 Tax=Cardiobacterium hominis... 128 7e-29 UniRef50_A6VMV6 Putative uncharacterized protein n=1 Tax=Actinob... 117 1e-25 UniRef50_UPI0001B42C02 hypothetical protein LmonF_07195 n=1 Tax=... 66 3e-10 Sequences not found previously or not previously below threshold: UniRef50_UPI000190A7E3 hypothetical protein Salmonelentericaente... 40 0.019 CONVERGED! >UniRef50_A7MKF9 UPF0266 membrane protein ESA_01432 n=2 Tax=Enterobacteriaceae RepID=Y1432_ENTS8 Length = 152 Score = 170 bits (432), Expect = 9e-42, Method: Composition-based stats. Identities = 100/152 (65%), Positives = 127/152 (83%) Query: 1 MTITDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGRIDSVIFVGLIVILIYN 60 MT+TD VL++FI ALL +AIYDQ+ RR+G TLL +PLL+RGR DS+IF GL+ ILI+ Sbjct: 1 MTLTDGVLVIFIIALLGWAIYDQWGTERRHGKTLLRVPLLKRGRADSLIFTGLVAILIWQ 60 Query: 61 NVTNHGALITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFANVWIEYSRIKAMNLSEDG 120 NV +HGAL+TTWLL AL L+ Y+FWIR P+I FK++GFFFA W++Y+ IKAMNLSEDG Sbjct: 61 NVASHGALLTTWLLGALGLLAIYLFWIREPQIRFKREGFFFAGGWVKYNHIKAMNLSEDG 120 Query: 121 VLVMQLEQRRLLIRVRNIDDLEKIYKLLVSTQ 152 VLVMQL++RRLLIRV+NIDDLE+IY +V+ Q Sbjct: 121 VLVMQLDKRRLLIRVKNIDDLERIYHFIVNNQ 152 >UniRef50_Q321Z7 UPF0266 membrane protein yobD n=138 Tax=Enterobacteriaceae RepID=YOBD_SHIBS Length = 158 Score = 168 bits (425), Expect = 7e-41, Method: Composition-based stats. Identities = 149/150 (99%), Positives = 150/150 (100%) Query: 1 MTITDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGRIDSVIFVGLIVILIYN 60 MTITDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGRIDSVIFVGLIVILIYN Sbjct: 1 MTITDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGRIDSVIFVGLIVILIYN 60 Query: 61 NVTNHGALITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFANVWIEYSRIKAMNLSEDG 120 NVTNHGALITTWLLSALALMGFYIFWIR+PKIIFKQKGFFFANVWIEYSRIKAMNLSEDG Sbjct: 61 NVTNHGALITTWLLSALALMGFYIFWIRIPKIIFKQKGFFFANVWIEYSRIKAMNLSEDG 120 Query: 121 VLVMQLEQRRLLIRVRNIDDLEKIYKLLVS 150 VLVMQLEQRRLLIRVRNIDDLEKIYKLLVS Sbjct: 121 VLVMQLEQRRLLIRVRNIDDLEKIYKLLVS 150 >UniRef50_Q2NTC6 UPF0266 membrane protein SG1324 n=12 Tax=Enterobacteriaceae RepID=Y1324_SODGM Length = 153 Score = 142 bits (358), Expect = 3e-33, Method: Composition-based stats. Identities = 77/153 (50%), Positives = 112/153 (73%), Gaps = 1/153 (0%) Query: 1 MTITDLVLILFIAALLAFAIYDQFIMPR-RNGPTLLAIPLLRRGRIDSVIFVGLIVILIY 59 MT+TD+ L++ I L FA++D+FI+ G T L +PL R+GR+D +IF+ L++IL+Y Sbjct: 1 MTVTDIGLVIMIVIALLFAVFDEFIVDYALRGKTRLRVPLRRQGRLDGLIFIVLLLILLY 60 Query: 60 NNVTNHGALITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFANVWIEYSRIKAMNLSED 119 N+T G ++T+ L+ L LM Y+ +IR P+++FK +GFF+ NV+I YSRIK MNLSED Sbjct: 61 KNITTDGKVMTSTLILFLGLMVIYLAYIRCPRMLFKTEGFFYGNVFINYSRIKNMNLSED 120 Query: 120 GVLVMQLEQRRLLIRVRNIDDLEKIYKLLVSTQ 152 G LV+ LE+R LLI+V +DDL+KIY LL+ Q Sbjct: 121 GYLVIDLEKRSLLIQVNKLDDLQKIYHLLIEIQ 153 >UniRef50_B8DGI9 UPF0266 membrane protein LMHCC_1856 n=17 Tax=Listeria RepID=Y1856_LISMH Length = 155 Score = 141 bits (357), Expect = 4e-33, Method: Composition-based stats. Identities = 52/147 (35%), Positives = 88/147 (59%), Gaps = 1/147 (0%) Query: 4 TDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGRIDSVIFVGLIVIL-IYNNV 62 T++ L + + +Y+ ++P G T+L++ L RGR D IFVG+IV+L + N Sbjct: 6 TNIFLFAANILTVLYILYNDAVIPLWKGKTVLSVKLRSRGRWDGYIFVGIIVLLFVSNTF 65 Query: 63 TNHGALITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFANVWIEYSRIKAMNLSEDGVL 122 G T+ LL + ++ YI + R K +FK+ G F+A ++ Y++I+ MNLSEDGVL Sbjct: 66 FREGPFSTSVLLGIMGVLFIYICFFRSSKAVFKESGLFYALLFFPYAKIERMNLSEDGVL 125 Query: 123 VMQLEQRRLLIRVRNIDDLEKIYKLLV 149 V++ ++RL++ R+ DLEK+ + Sbjct: 126 VIETNRQRLMLFARSEKDLEKMLAVFT 152 >UniRef50_A0AGM5 UPF0266 membrane protein lwe0739 n=1 Tax=Listeria welshimeri serovar 6b str. SLCC5334 RepID=Y739_LISW6 Length = 155 Score = 140 bits (353), Expect = 1e-32, Method: Composition-based stats. Identities = 52/147 (35%), Positives = 90/147 (61%), Gaps = 1/147 (0%) Query: 4 TDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGRIDSVIFVGLIVIL-IYNNV 62 T++ L++ + + +Y+ ++P G T+L + L RGR D IFVG+I +L I N Sbjct: 6 TNIFLLVANILTILYILYNDAVIPLWKGKTVLTVKLRSRGRWDGYIFVGIIALLFISNTF 65 Query: 63 TNHGALITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFANVWIEYSRIKAMNLSEDGVL 122 G +T+ LL+ + ++ YI + R K +FK+ G F+A ++ YS+I+ MNLSEDG+L Sbjct: 66 FREGPQLTSILLAVMGILFIYICFFRSSKAVFKETGLFYALLFFPYSKIERMNLSEDGIL 125 Query: 123 VMQLEQRRLLIRVRNIDDLEKIYKLLV 149 V++ ++RL++ R+ DLEK+ + Sbjct: 126 VIETNRQRLMLFARSEKDLEKMLAVFT 152 >UniRef50_Q9CMJ4 UPF0266 membrane protein PM0830 n=11 Tax=Pasteurellaceae RepID=Y830_PASMU Length = 152 Score = 138 bits (348), Expect = 5e-32, Method: Composition-based stats. Identities = 57/149 (38%), Positives = 93/149 (62%), Gaps = 2/149 (1%) Query: 1 MTITDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGRIDSVIFVGLIVILIYN 60 M I +++L L I L +A YDQF M G TLL + L ++G+ D++IF LI I+IY Sbjct: 1 MMIINVLLCLGIFCFLLYAFYDQFFMDCWKGKTLLKVHLKKQGQKDALIFSLLIGIIIYQ 60 Query: 61 NVTNHGALITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFANVWIEYSRIKAMNLSEDG 120 TN + T +LL+AL L+ Y +IR P ++ K+KGFFF N++ +Y+ I +NL+E+ Sbjct: 61 TYTNLSS-ATLYLLTALILLSVYAAFIRAPMLLLKEKGFFFGNIYFQYADIHQVNLAENN 119 Query: 121 VLVMQLEQ-RRLLIRVRNIDDLEKIYKLL 148 +LV+ ++ +RLL+ + D E++ + Sbjct: 120 ILVIDMKNGKRLLVHLLTDQDREQVIQFF 148 >UniRef50_D2TVV5 Putative uncharacterized protein n=1 Tax=Arsenophonus nasoniae RepID=D2TVV5_9ENTR Length = 179 Score = 136 bits (344), Expect = 1e-31, Method: Composition-based stats. Identities = 69/152 (45%), Positives = 105/152 (69%) Query: 1 MTITDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGRIDSVIFVGLIVILIYN 60 M + ++VL + I +L +AIY++ I+ NG T L I L RR RID+VIF+ LI I+IY+ Sbjct: 28 MNMNNIVLTILILLMLTYAIYEELIVNLLNGKTKLKIKLRRRNRIDAVIFIILIAIVIYH 87 Query: 61 NVTNHGALITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFANVWIEYSRIKAMNLSEDG 120 N+ HG+ TT+LL L+ Y+ +IR PK+ FK KGF++ NV+I Y IK +NLS+DG Sbjct: 88 NIIQHGSQFTTYLLMITVLIAIYLTFIRYPKLYFKDKGFYYNNVYILYDHIKTINLSKDG 147 Query: 121 VLVMQLEQRRLLIRVRNIDDLEKIYKLLVSTQ 152 +L++ L +R++ I V+ DDL+KIY L++ + Sbjct: 148 ILIVGLAKRKIYIAVKQFDDLDKIYNFLLNNK 179 >UniRef50_A7JUG5 Possible membrane protein n=4 Tax=Pasteurellaceae RepID=A7JUG5_PASHA Length = 161 Score = 135 bits (341), Expect = 4e-31, Method: Composition-based stats. Identities = 59/151 (39%), Positives = 89/151 (58%), Gaps = 5/151 (3%) Query: 3 ITDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGRIDSVIFVGLIVILIYNNV 62 +T+ +LILFI L FAIYDQ M + G TLL I L ++ ID+ + +GLIV+ I V Sbjct: 1 MTNTILILFILLGLVFAIYDQVFMHKLKGTTLLEIRLKKQKTIDTWLLIGLIVLSISYGV 60 Query: 63 TNHGALITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFANVWIEYSRIKAMNLSE---- 118 N T +LL+ ++ Y+ + R P+++ KQ GFFFANV+ Y +I +N++E Sbjct: 61 QNQIQPFTLYLLATCIILSVYLAFFRSPRLLLKQHGFFFANVFFNYDKIYQVNIAEGKAD 120 Query: 119 DGVLVMQLEQ-RRLLIRVRNIDDLEKIYKLL 148 + +LV+ L RRLL V N +DL+ + Sbjct: 121 EKILVIDLHSGRRLLAYVENAEDLQPVVDFF 151 >UniRef50_C8N928 Membrane protein n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N928_9GAMM Length = 165 Score = 128 bits (321), Expect = 7e-29, Method: Composition-based stats. Identities = 52/152 (34%), Positives = 69/152 (45%), Gaps = 3/152 (1%) Query: 2 TITDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGRIDSVIFVGLIVILIYNN 61 +T L L L LA+ YD + RR G TL A+ L RR D+V +I Y Sbjct: 1 MLTTLGLWLLNLGYLAYLTYDIAVQSRRGGATLTAVRLRRRA-ADAVFLAVIIAAGFYYE 59 Query: 62 VTNHGALITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFANVWIEYSRIKAMNLSEDGV 121 ++ H AL L+ R PK K+ GF + YS I AM LSEDGV Sbjct: 60 IS-HDRTPANLAALALLLLLVLGAGFRYPKWRLKKDGFTAGGRYWPYSAITAMRLSEDGV 118 Query: 122 LVMQLE-QRRLLIRVRNIDDLEKIYKLLVSTQ 152 LV+ L + L++ V IDDLE+ + Sbjct: 119 LVLTLTGGQNLILPVARIDDLEQAAAFFTGEE 150 >UniRef50_A6VMV6 Putative uncharacterized protein n=1 Tax=Actinobacillus succinogenes 130Z RepID=A6VMV6_ACTSZ Length = 150 Score = 117 bits (293), Expect = 1e-25, Method: Composition-based stats. Identities = 51/147 (34%), Positives = 86/147 (58%), Gaps = 2/147 (1%) Query: 3 ITDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGRIDSVIFVGLIVILIYNNV 62 + + +LIL I A A+A ++QF + R G T L + L +R ++DS+IF+ LI I+I+ + Sbjct: 1 MINTLLILSIVAYFAYAFFEQFGIDRLKGKTHLKVRLKKRTKLDSLIFIALIGIIIWQS- 59 Query: 63 TNHGALITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFANVWIEYSRIKAMNLSEDGVL 122 T +LL L L+ Y + R P ++ K GFFF N++I + +I A+NL+ D L Sbjct: 60 EGQIEPFTLYLLGFLILLSLYTAFFRTPMLVIKHNGFFFENIFITFDKIHAINLANDYKL 119 Query: 123 VMQLEQ-RRLLIRVRNIDDLEKIYKLL 148 V L+ +R++ ++ N D + + LL Sbjct: 120 VFDLKNGKRMIAQLTNRADTDAVVALL 146 >UniRef50_UPI0001B42C02 hypothetical protein LmonF_07195 n=1 Tax=Listeria monocytogenes FSL F2-515 RepID=UPI0001B42C02 Length = 103 Score = 66.5 bits (161), Expect = 3e-10, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 41/84 (48%) Query: 68 LITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFANVWIEYSRIKAMNLSEDGVLVMQLE 127 + L V K+ K FF A ++ Y++I+ MNLSEDGVLV++ Sbjct: 10 FPLLYCLGLWVCYSSISASSAVRKLFSKNPDFFIALLFFPYAKIERMNLSEDGVLVIETN 69 Query: 128 QRRLLIRVRNIDDLEKIYKLLVST 151 ++RL++ R+ LEK L+ Sbjct: 70 RQRLMLFARSEKXLEKCSLYLLHI 93 >UniRef50_UPI000190A7E3 hypothetical protein Salmonelentericaenterica_07056 n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. 404ty RepID=UPI000190A7E3 Length = 58 Score = 40.3 bits (93), Expect = 0.019, Method: Composition-based stats. Identities = 31/39 (79%), Positives = 32/39 (82%) Query: 113 AMNLSEDGVLVMQLEQRRLLIRVRNIDDLEKIYKLLVST 151 MNLSEDGVLVMQLEQRRLLIRVRNIDDLEK L+ Sbjct: 1 EMNLSEDGVLVMQLEQRRLLIRVRNIDDLEKYINFLLKI 39 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.325 0.150 0.383 Lambda K H 0.267 0.0465 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 574,599,597 Number of Sequences: 3077464 Number of extensions: 22607326 Number of successful extensions: 135834 Number of sequences better than 1.0e-01: 27 Number of HSP's better than 0.1 without gapping: 24 Number of HSP's successfully gapped in prelim test: 15 Number of HSP's that attempted gapping in prelim test: 135783 Number of HSP's gapped (non-prelim): 44 length of query: 152 length of database: 1,040,396,356 effective HSP length: 115 effective length of query: 37 effective length of database: 686,487,996 effective search space: 25400055852 effective search space used: 25400055852 T: 11 A: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 39 (21.0 bits) S2: 87 (37.9 bits)