22 c3ge6B_ Probab=100.00  E-value=2.4e-38  Score=226.66  Aligned_columns=166  Identities=21%

Q ss_pred             CCHHHHHHHCCEEECC-CCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf             9569999826200065-799879899999999998387888898629999749789999999998664112353577887
Q batch____         1 MDALELLINRRSASRL-AEPAPTGEQLQNILRAGMRAPDHKSMQPWHFFVIEGEGRERFSAVLEQGAIAAGSDDKAIDKA   79 (183)
Q Consensus         1 M~~~~~i~~RrSvR~f-~~~~v~~e~l~~il~aa~~aPs~~n~qp~~~~vv~~~~~~~l~~~~~~~~~~~~~~~~~~~~~   79 (183)
                      |||.|+|++|||+|.| +++|||+|+|++||++|++|||++|.|||+|++|++++..+.+..+..........       
T Consensus         6 ~~l~e~i~~RrSvR~f~~d~pV~~e~l~~il~~a~~APS~~n~qp~~~vvv~~~~~~~~l~~~~~~~~~~~~~-------   78 (210)
T c3ge6B_           6 TDFXEIVKGRRSIRNYDTNVKISKEEXTQILEEATLAPSSVNXQPWRFLVIDSEEGKATLAPLAKFNQVQVET-------   78 (210)
T ss_dssp             CCHHHHHHTCCBCCCBCTTCCCCHHHHHHHHHHHTTSCCGGGCCCEEEEEECSHHHHHHHGGGCTTCHHHHHH-------
T ss_pred             HHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHC-------
T ss_conf             6899999826000155999889989999999998409988887433999935989999999994886763112-------


Q ss_pred             HHHHHCCCEEEEEEECCCCCC------------------------------------CHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             655415748999983356553------------------------------------13578889999999999999999
Q batch____        80 RNAPFRAPLIITVVAKCEENH------------------------------------KVPRWEQEMSAGCAVMAMQMAAV  123 (183)
Q Consensus        80 ~~~~~~a~~~~~~~~~~~~~~------------------------------------~~~~~~~~~~~g~a~~~~~Laa~  123 (183)
                            ++.++..........                                    .....+...|+|+++||++|+|+
T Consensus        79 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~g~a~~~~~LaA~  152 (210)
T c3ge6B_          79 ------SSAVIAVFGDXKAIDQLENIYDTAVEKGLXPQEVRDRQVPAIQGXYENVPASALKDSILIDSGLVSXQLXLVAR  152 (210)
T ss_dssp             ------SSEEEEEEEETTGGGGHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------CCCEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             ------77034401021156779999997865023303344445543222101345001125589989999999886565


Q ss_pred             HCCCCEEEECCCCCCHHHHHHHCCCC-CCCEEEEEEEEECCCCCCCCCCCCCCHHHCCCC
Q ss_conf             77983897443337948999971749-887899999840537887888868994450137
Q batch____       124 AQGFGGIWRSGALTESPVVREAFGCR-EQDKIVGFLYLGTPQLKASTSINVPDPTPFVTY  182 (183)
Q Consensus       124 ~~Glgsc~~~~~~~~~~~~~~~l~ip-~~~~~~~~i~iGyp~~~~~~~~~~p~~~~~v~~  182 (183)
                      ++|||+||+++  ++.+.+++.||++ +++.+++++++|||++++..++|+ +.+++|+|
T Consensus       153 ~~Glgs~~~~~--~~~~~v~~~l~~~~~~~~~~~~i~lG~p~~~~~~~~R~-p~~evv~~  209 (210)
T c3ge6B_         153 AHGYDTNPIGG--YEKDQIAEAFGXEKDRYVPVXLLSIGKAVDAGYPSVRL-PINDIADW  209 (210)
T ss_dssp             HTTCEEEEECC--SCHHHHHHHTTCCTTTEEEEEEEEEECBSSCCCCCCCC-CGGGTCCC
T ss_pred             HCCCCEEEECC--CCHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCC-CHHHHEEE
T ss_conf             42832473157--79899998708882366999999840417888789989-97881440