Phyre 2 alignment of P0A879 with c2rgoA_

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Job Description | P0A879
Confidence | 60.73% | Date | Thu Jan 5 11:07:07 GMT 2012
Rank | 87 | Aligned Residues | 45
% Identity | 24% | Template | c2rgoA_
PDB info | PDB header:oxidoreductase | Chain: A: PDB Molecule:alpha-glycerophosphate oxidase; | PDBTitle: structure of alpha-glycerophosphate oxidase from2 streptococcus sp.: a template for the mitochondrial alpha-3 glycerophosphate dehydrogenase
Resolution | 2.40 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | A | H | K | T | N | Q | V | L | G | Q | A | L | L | A | K | R | M | G | K | T | E | I | I | A | E | T | G | A | G | Q | H | G | V | A | S | A | L | A | S | A | L | L | G | L | K | C | R | I | Y
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | S | N | K | T | R | Q | D | . | . | S | I | Q | K | M | Q | Q | E | E | L | D | L | L | I | I | . | . | G | G | G | I | T | G | A | G | V | A | V | Q | A | A | A | S | G | I | K | T | G | L | I
Template Known Secondary structure |  | S |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  | . | . |  |  | S |  |  |  |  |  |  |  |  |  |  |  | T | T | T |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 3 | . | . | . | . | . | . |  |  | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . |  |  | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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