12/01/2012 20:50:31 : INFO  : Run start: Thu Jan 12 20:50:31 GMT 2012
12/01/2012 20:50:36 : INFO  : Initialised job
12/01/2012 20:50:37 : INFO  : Renaming log file 'phyre2_20120112_205030.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/62583391f33df213/phyre_20120112_205030.log'
12/01/2012 20:50:38 : INFO  : Initialised job:
Sequence
>batch____
MTTLLNPYFGEFGGMYVPQILMPALRQLEEAFVSAQKDPEFQAQFNDLLKNYAGRPTALT
KCQNITAGTNTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGKTEIIAETGAGQHGVASA
LASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHSGSATLKDACNEALRDWSGS
YETAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQILEREGRLPDAVIACVGGGSNAIGM
FADFINETNVGLIGVEPGGHGIETGEHGAPLKHGRVGIYFGMKAPMMQTEDGQIEESYSI
SAGLDFPSVGPQHAYLNSTGRADYVSITDDEALEAFKTLCLHEGIIPALESSHALAHALK
MMRENPDKEQLLVVNLSGRGDKDIFTVHDILKARGEI

12/01/2012 20:50:39 : INFO  : Checked sequence
12/01/2012 20:50:42 : INFO  : Finding homologues with PSI-BLAST
12/01/2012 20:50:43 : INFO  : PSI-BLAST 3 iterations
12/01/2012 20:53:01 : INFO  : PSI-BLAST 5 iterations
12/01/2012 20:55:18 : INFO  : Finished PSI-BLAST
12/01/2012 20:55:20 : INFO  : Running Buildali to generate a3m file
12/01/2012 21:04:39 : INFO  : Converting to HMM
12/01/2012 21:04:46 : INFO  : Calibrating HMM
12/01/2012 21:04:59 : INFO  : Searching HMM database
12/01/2012 21:11:52 : INFO  : Finished buildali
12/01/2012 21:11:53 : INFO  : Predicting secondary structure
12/01/2012 21:11:56 : INFO  : Predicted secondary structure (PSI-Pred)
12/01/2012 21:11:59 : INFO  : Predicting Disordered regions
12/01/2012 21:12:01 : INFO  : Predicted Disorder (Disopred)
12/01/2012 21:12:03 : INFO  : Running memsat_svm check
12/01/2012 21:16:13 : INFO  : Globular protein
12/01/2012 21:16:14 : INFO  : Predicted Transmembrane (memsat_svm) ID '62583391f33df213'
12/01/2012 21:16:15 : INFO  : Initialising fold library search
12/01/2012 21:16:17 : INFO  : Initialised search input
12/01/2012 21:16:18 : INFO  : Building Ensemble models
12/01/2012 21:16:20 : INFO  : Building hh.d1qopb_.model.1.pdb
12/01/2012 21:16:30 : INFO  : Building d1qopb_.1.pdb
12/01/2012 21:16:40 : INFO  : Building c1x1qA_.2.pdb
12/01/2012 21:16:50 : INFO  : Building d1v8za1.3.pdb
12/01/2012 21:16:59 : INFO  : Building c2o2jA_.4.pdb
12/01/2012 21:17:10 : INFO  : Building d1wkva1.5.pdb
12/01/2012 21:17:22 : INFO  : Building c1tdjA_.6.pdb
12/01/2012 21:17:33 : INFO  : Building c3iauA_.7.pdb
12/01/2012 21:17:46 : INFO  : Building c3pc3A_.8.pdb
12/01/2012 21:18:00 : INFO  : Building d1v71a1.9.pdb
12/01/2012 21:18:13 : INFO  : Building d1jbqa_.10.pdb
12/01/2012 21:18:25 : INFO  : Building c1jbqD_.11.pdb
12/01/2012 21:18:40 : INFO  : Building c2gn0A_.12.pdb
12/01/2012 21:18:54 : INFO  : Building d1z7wa1.13.pdb
12/01/2012 21:19:05 : INFO  : Building d1pwha_.14.pdb
12/01/2012 21:19:15 : INFO  : Building d1tdja1.15.pdb
12/01/2012 21:19:26 : INFO  : Building c3r0zA_.16.pdb
12/01/2012 21:19:37 : INFO  : Building c3l6cA_.17.pdb
12/01/2012 21:19:48 : INFO  : Building d1ve5a1.18.pdb
12/01/2012 21:19:57 : INFO  : Building c1p5jA_.19.pdb
12/01/2012 21:20:06 : INFO  : Building d1p5ja_.20.pdb
12/01/2012 21:20:31 : INFO  : Finished HH model building
12/01/2012 21:20:32 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
12/01/2012 21:21:22 : INFO  : html domain output complete ID '62583391f33df213'
12/01/2012 23:14:54 : INFO  : Run end  : Thu Jan 12 23:14:52 GMT 2012
