BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (1105 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P38097 Uncharacterized protein yegE n=72 Tax=Proteobact... 2262 0.0 UniRef50_A1JKY3 Putative inner membrane protein n=11 Tax=Enterob... 961 0.0 UniRef50_B5EXV2 PAS domain protein n=33 Tax=Enterobacteriaceae R... 859 0.0 UniRef50_B2VFQ9 Putative sensor-type protein YegE n=1 Tax=Erwini... 838 0.0 UniRef50_A6V917 Membrane protein, putative n=6 Tax=Pseudomonas a... 635 e-180 UniRef50_Q0KDS7 Predicted signal transduction protein containing... 556 e-156 UniRef50_B4X4M1 PAS fold family n=2 Tax=Alcanivorax RepID=B4X4M1... 495 e-138 UniRef50_C4LCA0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 406 e-111 UniRef50_B8GT56 Diguanylate cyclase/phosphodiesterase with PAS/P... 363 3e-98 UniRef50_C5BBK6 PAS fold family n=2 Tax=Edwardsiella RepID=C5BBK... 350 2e-94 UniRef50_B2J5P2 Diguanylate cyclase/phosphodiesterase with PAS/P... 318 1e-84 UniRef50_C8SU22 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 315 6e-84 UniRef50_Q2YC85 Diguanylate cyclase/phosphodiesterase with PAS/P... 303 2e-80 UniRef50_Q3J9L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 303 2e-80 UniRef50_B8GTY7 Diguanylate cyclase/phosphodiesterase with PAS/P... 303 4e-80 UniRef50_C7RRQ6 Response regulator receiver modulated diguanylat... 297 2e-78 UniRef50_A6SZY4 Uncharacterized conserved protein n=1 Tax=Janthi... 296 2e-78 UniRef50_A4G4I8 Putative uncharacterized protein n=2 Tax=Hermini... 295 1e-77 UniRef50_A3ISZ5 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 288 7e-76 UniRef50_B9ZQM9 Diguanylate cyclase/phosphodiesterase with PAS/P... 284 2e-74 UniRef50_B9YZ47 Diguanylate cyclase/phosphodiesterase with PAS/P... 282 6e-74 UniRef50_Q98G48 Mll3491 protein n=1 Tax=Mesorhizobium loti RepID... 282 6e-74 UniRef50_B7K4E7 Response regulator receiver modulated diguanylat... 282 7e-74 UniRef50_B4AXX8 Diguanylate cyclase/phosphodiesterase with PAS/P... 277 2e-72 UniRef50_B8GSV3 Signal transduction protein containing a membran... 276 3e-72 UniRef50_Q474K3 Diguanylate cyclase/phosphodiesterase with PAS/P... 269 4e-70 UniRef50_C6MI98 Diguanylate cyclase/phosphodiesterase with PAS/P... 269 5e-70 UniRef50_B4WLF6 PAS fold family n=1 Tax=Synechococcus sp. PCC 73... 262 6e-68 UniRef50_B9ZMB9 Diguanylate cyclase/phosphodiesterase with PAS/P... 262 6e-68 UniRef50_Q12L20 Diguanylate cyclase/phosphodiesterase with PAS/P... 260 3e-67 UniRef50_Q88M14 Sensory box protein/GGDEF family protein n=23 Ta... 259 6e-67 UniRef50_B0C150 Signal transduction protein containing an EAL do... 257 2e-66 UniRef50_A3JCF9 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 256 3e-66 UniRef50_A0YI01 PAS sensor diguanylate cyclase/phophodiesterase ... 253 3e-65 UniRef50_B0C6M6 PAS sensor diguanylate cyclase/phophodiesterase,... 251 1e-64 UniRef50_A3IWQ8 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 241 1e-61 UniRef50_C0N6D2 Putative uncharacterized protein n=1 Tax=Methylo... 241 1e-61 UniRef50_A1SX34 Diguanylate cyclase/phosphodiesterase with PAS/P... 235 6e-60 UniRef50_C8QXB4 Diguanylate cyclase/phosphodiesterase with PAS/P... 233 4e-59 UniRef50_C0N6D3 Putative uncharacterized protein n=1 Tax=Methylo... 232 6e-59 UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacter... 231 9e-59 UniRef50_B8GQU5 Diguanylate cyclase/phosphodiesterase with PAS/P... 229 7e-58 UniRef50_A0Y401 PAS sensor diguanylate cyclase/phophodiesterase ... 228 7e-58 UniRef50_B5JW24 PAS sensor diguanylate cyclase and phophodiester... 224 1e-56 UniRef50_C4I4I7 Sensory box/ggdef/eal domain protein n=36 Tax=Bu... 223 3e-56 UniRef50_D0IWU4 Diguanylate cyclase/phosphodiesterase with n=3 T... 223 4e-56 UniRef50_Q6LLM3 Hipothetical sensory box/GGDEF family protein n=... 223 4e-56 UniRef50_A1SU67 Diguanylate cyclase/phosphodiesterase with PAS/P... 222 6e-56 UniRef50_A6F7G4 PAS sensor diguanylate cyclase and phophodiester... 219 4e-55 UniRef50_B5JU45 PAS sensor diguanylate cyclase and phophodiester... 219 6e-55 UniRef50_B8GPR3 Signal transduction protein n=2 Tax=Thioalkalivi... 215 9e-54 UniRef50_Q07XP4 Response regulator receiver modulated diguanylat... 214 2e-53 UniRef50_B8HP72 Diguanylate cyclase/phosphodiesterase with extra... 213 4e-53 UniRef50_C5BTR2 PAS sensor diguanylate cyclase/phophodiesterase ... 212 5e-53 UniRef50_B0BZ23 Diguanylate cyclase/phosphodiesterase with PAS/P... 212 6e-53 UniRef50_Q1YVI9 Putative uncharacterized protein n=1 Tax=gamma p... 209 7e-52 UniRef50_A9KMR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 207 2e-51 UniRef50_B8GLH4 Putative diguanylate cyclase n=1 Tax=Thioalkaliv... 205 9e-51 UniRef50_A8FQD1 Sensory box protein n=15 Tax=Shewanella RepID=A8... 204 1e-50 UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 203 3e-50 UniRef50_Q2SJ14 Predicted signal transduction protein containing... 201 9e-50 UniRef50_Q3SIB5 Putative diguanylate cyclase/phosphodiesterase (... 201 2e-49 UniRef50_A4TKF0 Diguanylate cyclase with PAS/PAC sensor n=31 Tax... 200 2e-49 UniRef50_D0I367 Sensory box/GGDEF family protein n=1 Tax=Grimont... 200 3e-49 UniRef50_C0GER8 Diguanylate cyclase and metal dependent phosphoh... 198 1e-48 UniRef50_Q2BB47 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 197 2e-48 UniRef50_B0TL03 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sh... 197 3e-48 UniRef50_A1TS74 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 196 6e-48 UniRef50_Q2SAB8 Predicted signal transduction protein containing... 194 1e-47 UniRef50_C8W213 Diguanylate cyclase/phosphodiesterase with PAS/P... 193 3e-47 UniRef50_D1SVP0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 192 6e-47 UniRef50_Q3JE85 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ni... 192 7e-47 UniRef50_Q7MQD8 Sensory box/GGDEF family protein n=54 Tax=Vibrio... 191 1e-46 UniRef50_Q47ED8 Response regulator receiver modulated diguanylat... 191 1e-46 UniRef50_A3ESX6 Diguanylate cyclase/phosphodiesterase with PAS/P... 190 2e-46 UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 190 2e-46 UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacteriu... 190 3e-46 UniRef50_Q7NXK6 Putative uncharacterized protein n=1 Tax=Chromob... 190 3e-46 UniRef50_C6XCG6 Diguanylate cyclase/phosphodiesterase with PAS/P... 189 5e-46 UniRef50_A4G5U9 Putative uncharacterized protein n=1 Tax=Hermini... 189 5e-46 UniRef50_Q0AG61 Diguanylate cyclase/phosphodiesterase with PAS/P... 189 8e-46 UniRef50_B5JPN9 Sensor protein n=1 Tax=Verrucomicrobiae bacteriu... 188 1e-45 UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 188 1e-45 UniRef50_B9Z5W9 Putative PAS/PAC sensor protein n=1 Tax=Lutiella... 187 2e-45 UniRef50_C7RNJ0 Diguanylate cyclase/phosphodiesterase with PAS/P... 186 3e-45 UniRef50_B9R245 Putative uncharacterized protein n=1 Tax=Labrenz... 186 4e-45 UniRef50_B0CD40 Diguanylate cyclase/phosphodiesterase with PAS/P... 185 7e-45 UniRef50_D1UJZ4 Diguanylate cyclase/phosphodiesterase with PAS/P... 185 8e-45 UniRef50_D0J4K1 Diguanylate cyclase/phosphodiesterase with n=1 T... 185 8e-45 UniRef50_Q67KG5 Putative uncharacterized protein n=1 Tax=Symbiob... 185 8e-45 UniRef50_A8H6Y6 Diguanylate cyclase/phosphodiesterase with PAS/P... 184 1e-44 UniRef50_B4W8V0 Sensor protein n=1 Tax=Brevundimonas sp. BAL3 Re... 183 3e-44 UniRef50_Q1PXY5 Putative uncharacterized protein n=1 Tax=Candida... 182 5e-44 UniRef50_C5BTG9 PAS/GGDEF/EAL domain protein n=2 Tax=Gammaproteo... 181 2e-43 UniRef50_B8GN37 Diguanylate cyclase/phosphodiesterase with PAS/P... 180 3e-43 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 180 3e-43 UniRef50_A8VRC4 Putative diguanylate cyclase n=1 Tax=Bacillus se... 179 6e-43 UniRef50_A8GZL9 Diguanylate cyclase/phosphodiesterase with PAS/P... 179 7e-43 UniRef50_A8FYM5 Signal transduction protein containing a membran... 178 1e-42 UniRef50_B8GTG0 Signal transduction protein containing a membran... 177 2e-42 UniRef50_A6FHQ7 PAS sensor diguanylate cyclase and phophodiester... 177 2e-42 UniRef50_Q0A9L9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 177 2e-42 UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultu... 176 3e-42 UniRef50_B1Y6A9 Diguanylate cyclase/phosphodiesterase with PAS/P... 176 4e-42 UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/P... 176 6e-42 UniRef50_C6XBJ6 Diguanylate cyclase/phosphodiesterase with PAS/P... 175 1e-41 UniRef50_C6XBC8 Response regulator receiver modulated diguanylat... 174 1e-41 UniRef50_C6XCZ6 Diguanylate cyclase/phosphodiesterase with PAS/P... 174 1e-41 UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 174 1e-41 UniRef50_A8VQV8 Putative metal dependent phosphohydrolase n=1 Ta... 174 2e-41 UniRef50_Q21SE4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 173 3e-41 UniRef50_A1K6P1 Conserved hypothetical signaling protein n=1 Tax... 173 4e-41 UniRef50_Q1Q2M0 Putative uncharacterized protein n=2 Tax=Bacteri... 172 5e-41 UniRef50_B8KBV9 Sensor protein n=1 Tax=Vibrio parahaemolyticus 1... 172 6e-41 UniRef50_A9L3T6 Diguanylate cyclase/phosphodiesterase n=12 Tax=S... 172 6e-41 UniRef50_D0IUW1 Diguanylate cyclase/phosphodiesterase with n=3 T... 172 7e-41 UniRef50_A3QBK2 Response regulator receiver modulated diguanylat... 172 9e-41 UniRef50_UPI0001C31379 diguanylate cyclase/phosphodiesterase wit... 172 9e-41 UniRef50_D2M1V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 171 1e-40 UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/P... 171 1e-40 UniRef50_B9ZRI3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 171 2e-40 UniRef50_Q1N3N5 Sensory box protein n=1 Tax=Bermanella marisrubr... 171 2e-40 UniRef50_C5T4L2 Diguanylate cyclase/phosphodiesterase with PAS/P... 170 3e-40 UniRef50_D0I8U2 Putative uncharacterized protein n=1 Tax=Grimont... 170 3e-40 UniRef50_UPI000169A144 PAS sensor diguanylate cyclase and phopho... 170 3e-40 UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 169 4e-40 UniRef50_B8HUG4 Diguanylate cyclase/phosphodiesterase with PAS/P... 169 4e-40 UniRef50_Q47JT9 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 169 4e-40 UniRef50_UPI0001C30E99 diguanylate cyclase/phosphodiesterase wit... 169 5e-40 UniRef50_Q30T73 Diguanylate cyclase/phosphodiesterase with PAS/P... 169 6e-40 UniRef50_C6HZ81 Diguanylate cyclase/phosphodiesterase with PAS/P... 169 6e-40 UniRef50_C6WWW7 Diguanylate cyclase/phosphodiesterase with PAS/P... 169 8e-40 UniRef50_B5ERX6 Diguanylate cyclase/phosphodiesterase with PAS/P... 168 9e-40 UniRef50_C0N942 Cyclic diguanylate phosphodiesterase domain prot... 168 1e-39 UniRef50_Q6M6C9 SENSORY BOX/GGDEF FAMILY PROTEIN n=3 Tax=Coryneb... 167 2e-39 UniRef50_B4S311 Predicted signal transduction protein containing... 166 3e-39 UniRef50_B1XXC7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 166 4e-39 UniRef50_B7K9S9 Diguanylate cyclase/phosphodiesterase with PAS/P... 166 4e-39 UniRef50_Q31NI4 Response regulator receiver modulated diguanylat... 165 9e-39 UniRef50_B8GSM8 Diguanylate cyclase/phosphodiesterase with PAS/P... 164 1e-38 UniRef50_A4Y0E0 Diguanylate cyclase/phosphodiesterase with PAS/P... 164 1e-38 UniRef50_Q0EXC8 Signal transduction protein containing a membran... 164 1e-38 UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/P... 164 2e-38 UniRef50_A6CIZ8 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 164 2e-38 UniRef50_C9PLR8 Diguanylate cyclase/phosphodiesterase with PAS/P... 164 2e-38 UniRef50_Q3SME1 Putative diguanylate cyclase/phosphodiesterase (... 164 2e-38 UniRef50_Q67NQ9 Putative uncharacterized protein n=1 Tax=Symbiob... 163 3e-38 UniRef50_D1CEK7 Diguanylate cyclase/phosphodiesterase with PAS/P... 163 3e-38 UniRef50_Q0A7L2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 163 3e-38 UniRef50_Q3A4W5 Response regulator receiver modulated diguanylat... 163 3e-38 UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/P... 163 3e-38 UniRef50_A1TXX3 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ma... 163 4e-38 UniRef50_A1T0Y1 Response regulator receiver modulated diguanylat... 163 4e-38 UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/P... 163 4e-38 UniRef50_C7LQR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 162 5e-38 UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/P... 162 6e-38 UniRef50_Q2SCC3 Predicted signal transduction protein containing... 162 7e-38 UniRef50_Q3J1Y6 Diguanylate cyclase/phosphodiesterase with PAS/P... 162 8e-38 UniRef50_Q15NS8 Diguanylate cyclase/phosphodiesterase with PAS/P... 162 8e-38 UniRef50_Q3ILC0 Putative orphan protein ; putative sensory-box d... 162 9e-38 UniRef50_B4RSB4 PAS sensor diguanylate cyclase and phophodiester... 162 9e-38 UniRef50_B8GQW3 Signal transduction protein containing a membran... 162 1e-37 UniRef50_A6UJR0 Diguanylate cyclase/phosphodiesterase with PAS/P... 161 1e-37 UniRef50_Q2RQN5 Diguanylate cyclase/phosphodiesterase with PAS/P... 160 2e-37 UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 160 2e-37 UniRef50_B8KPY2 Diguanylate cyclaSe/phosphodiesterase with PAS/P... 160 3e-37 UniRef50_Q7NTV0 Putative uncharacterized protein n=1 Tax=Chromob... 160 4e-37 UniRef50_UPI0001AEC71A response regulator receiver modulated dig... 159 4e-37 UniRef50_B6BGA2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 159 5e-37 UniRef50_UPI0001AEBED2 PAS sensor diguanylate cyclase and phopho... 159 6e-37 UniRef50_A3JH23 Putative uncharacterized protein n=1 Tax=Marinob... 159 7e-37 UniRef50_A0L4P1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ma... 159 7e-37 UniRef50_C4KCC9 Response regulator receiver modulated diguanylat... 159 7e-37 UniRef50_B4SPP4 Diguanylate cyclase/phosphodiesterase with PAS/P... 159 7e-37 UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/P... 159 8e-37 UniRef50_Q88QU8 Sensory box protein n=22 Tax=Gammaproteobacteria... 159 8e-37 UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4... 159 8e-37 UniRef50_Q47X88 Sensory box sensor/GGDEF/EAL domain protein n=2 ... 158 1e-36 UniRef50_A6WTB4 Diguanylate cyclase/phosphodiesterase with PAS/P... 158 1e-36 UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 158 1e-36 UniRef50_A6QA23 Putative uncharacterized protein n=1 Tax=Sulfuro... 158 1e-36 UniRef50_Q21V50 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 157 2e-36 UniRef50_C6E953 Response regulator receiver modulated diguanylat... 157 2e-36 UniRef50_UPI0001C31434 diguanylate cyclase/phosphodiesterase wit... 157 2e-36 UniRef50_A4BB01 Putative uncharacterized protein n=1 Tax=Reineke... 157 2e-36 UniRef50_Q31P31 Diguanylate cyclase/phosphodiesterase with PAS/P... 157 2e-36 UniRef50_C0N3Y7 Putative uncharacterized protein n=1 Tax=Methylo... 157 2e-36 UniRef50_A9VWI8 Diguanylate cyclase n=2 Tax=Methylobacterium ext... 157 2e-36 UniRef50_B8HWB5 Signal transduction histidine kinase n=1 Tax=Cya... 157 2e-36 UniRef50_Q12JD4 Diguanylate cyclase/phosphodiesterase n=2 Tax=Sh... 157 2e-36 UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/P... 157 2e-36 UniRef50_Q1K3N9 Diguanylate cyclase/phosphodiesterase with PAS/P... 157 3e-36 UniRef50_UPI0001C3140A diguanylate cyclase/phosphodiesterase wit... 157 3e-36 UniRef50_C6XK75 Diguanylate cyclase/phosphodiesterase with PAS/P... 157 3e-36 UniRef50_C7LTY3 Diguanylate cyclase/phosphodiesterase with PAS/P... 157 3e-36 UniRef50_A1K8B9 Sensor protein n=1 Tax=Azoarcus sp. BH72 RepID=A... 157 3e-36 UniRef50_C1XLY9 PAS domain S-box/diguanylate cyclase (GGDEF) dom... 157 3e-36 UniRef50_C5SBC3 Diguanylate cyclase/phosphodiesterase with PAS/P... 157 3e-36 UniRef50_C0N6V7 Cyclic diguanylate phosphodiesterase domain prot... 156 5e-36 UniRef50_A3IRJ7 Sensor protein n=9 Tax=cellular organisms RepID=... 155 6e-36 UniRef50_C6ME80 Sensor protein n=1 Tax=Nitrosomonas sp. AL212 Re... 155 7e-36 UniRef50_B5JWR5 Sensory box/ggdef domain/eal domain protein n=1 ... 155 7e-36 UniRef50_Q1PVH4 Conserved hypothetical response regulator protei... 155 7e-36 UniRef50_B7KGI8 Diguanylate cyclase with PAS/PAC and GAF sensors... 155 7e-36 UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/P... 155 7e-36 UniRef50_Q2VYM7 Predicted signal transduction protein containing... 155 8e-36 UniRef50_C6QR24 Diguanylate cyclase/phosphodiesterase with PAS/P... 155 9e-36 UniRef50_Q5P8Z7 Sensory box/GGDEF family protein n=3 Tax=cellula... 155 1e-35 UniRef50_B8GU61 Signal transduction protein containing a membran... 154 1e-35 UniRef50_A9GW14 Sensory box/GGDEF family protein n=1 Tax=Sorangi... 154 1e-35 UniRef50_C4XHP1 Putative signaling protein n=2 Tax=Desulfovibrio... 154 2e-35 UniRef50_A5PAA5 Sensory box/GGDEF family protein n=1 Tax=Erythro... 154 2e-35 UniRef50_A4BCU3 Response regulator/sensory box/GGDEF domain/EAL ... 154 2e-35 UniRef50_D1CH73 Sensor protein n=1 Tax=Thermobaculum terrenum AT... 154 2e-35 UniRef50_Q1AT47 Multi-sensor signal transduction histidine kinas... 154 2e-35 UniRef50_A0KNI0 MorA n=2 Tax=Aeromonas RepID=A0KNI0_AERHH 154 3e-35 UniRef50_A8VU35 Putative metal dependent phosphohydrolase n=1 Ta... 153 4e-35 UniRef50_C0N2C6 Putative uncharacterized protein n=1 Tax=Methylo... 153 4e-35 UniRef50_D2XIQ4 Putative signal transduction protein n=1 Tax=unc... 153 4e-35 UniRef50_A3QHP3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sh... 153 4e-35 UniRef50_C1D6C2 Predicted signal transduction protein containing... 153 4e-35 UniRef50_B7GKR7 Multidomain signal transduction protein (Contain... 153 5e-35 UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 153 5e-35 UniRef50_A6TT69 Diguanylate cyclase/phosphodiesterase with PAS/P... 152 6e-35 UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 152 7e-35 UniRef50_Q3J907 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ni... 152 7e-35 UniRef50_A4XP68 Diguanylate cyclase/phosphodiesterase with PAS/P... 152 7e-35 UniRef50_A1VAH5 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 152 9e-35 UniRef50_A0RLD3 Diguanylate cyclase/phosphodiesterase n=79 Tax=c... 152 9e-35 UniRef50_Q4C8S6 PAS:GGDEF n=1 Tax=Crocosphaera watsonii WH 8501 ... 152 9e-35 UniRef50_C6WVC8 Diguanylate cyclase with PAS/PAC and GAF sensors... 152 1e-34 UniRef50_Q3JW35 EAL/GGDEF domain protein n=50 Tax=pseudomallei g... 152 1e-34 UniRef50_C8R1Y2 Response regulator receiver modulated diguanylat... 152 1e-34 UniRef50_Q3IEE0 Putative orphan protein; putative conserved doma... 151 1e-34 UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/P... 151 1e-34 UniRef50_Q2SF23 Predicted signal transduction protein containing... 151 1e-34 UniRef50_Q67RI1 Putative uncharacterized protein n=1 Tax=Symbiob... 151 1e-34 UniRef50_Q47K14 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 151 1e-34 UniRef50_B2UHK4 Diguanylate cyclase/phosphodiesterase with PAS/P... 151 2e-34 UniRef50_Q7NT05 Putative uncharacterized protein n=1 Tax=Chromob... 151 2e-34 UniRef50_Q0C2A3 Putative sensory box-containing diguanylate cycl... 150 2e-34 UniRef50_B4VWW1 Sensor protein n=3 Tax=Oscillatoriales RepID=B4V... 150 2e-34 UniRef50_Q30SV7 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 150 2e-34 UniRef50_B8GS54 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 150 2e-34 UniRef50_C7RN47 Diguanylate cyclase/phosphodiesterase with PAS/P... 150 3e-34 UniRef50_A4Y0Z3 Diguanylate cyclase/phosphodiesterase with PAS/P... 150 3e-34 UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax... 150 3e-34 UniRef50_C6MET2 Diguanylate cyclase/phosphodiesterase with PAS/P... 150 3e-34 UniRef50_C4ZM29 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 150 3e-34 UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 150 4e-34 >UniRef50_P38097 Uncharacterized protein yegE n=72 Tax=Proteobacteria RepID=YEGE_ECOLI Length = 1105 Score = 2262 bits (5861), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1105/1105 (100%), Positives = 1105/1105 (100%) Query: 1 MSKQSQHVLIALPHPLLHLVSLGLVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRH 60 MSKQSQHVLIALPHPLLHLVSLGLVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRH Sbjct: 1 MSKQSQHVLIALPHPLLHLVSLGLVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRH 60 Query: 61 AGRMWPGIALSCSLGNIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQN 120 AGRMWPGIALSCSLGNIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQN Sbjct: 61 AGRMWPGIALSCSLGNIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQN 120 Query: 121 LADWLRLALGSAIVPPLLGGVLVVLLTPGDDPLRAFLIWVLSESIGALALVPLGLLFKPH 180 LADWLRLALGSAIVPPLLGGVLVVLLTPGDDPLRAFLIWVLSESIGALALVPLGLLFKPH Sbjct: 121 LADWLRLALGSAIVPPLLGGVLVVLLTPGDDPLRAFLIWVLSESIGALALVPLGLLFKPH 180 Query: 181 YLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFL 240 YLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFL Sbjct: 181 YLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFL 240 Query: 241 TTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISES 300 TTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISES Sbjct: 241 TTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISES 300 Query: 301 ETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDL 360 ETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDL Sbjct: 301 ETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDL 360 Query: 361 QQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRT 420 QQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRT Sbjct: 361 QQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRT 420 Query: 421 EQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVL 480 EQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVL Sbjct: 421 EQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVL 480 Query: 481 PEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDM 540 PEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDM Sbjct: 481 PEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDM 540 Query: 541 TEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPL 600 TEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPL Sbjct: 541 TEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPL 600 Query: 601 LTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIG 660 LTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIG Sbjct: 601 LTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIG 660 Query: 661 SVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFID 720 SVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFID Sbjct: 661 SVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFID 720 Query: 721 LDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFI 780 LDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFI Sbjct: 721 LDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFI 780 Query: 781 ATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRV 840 ATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRV Sbjct: 781 ATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRV 840 Query: 841 TVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCE 900 TVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCE Sbjct: 841 TVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCE 900 Query: 901 GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLV 960 GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLV Sbjct: 901 GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLV 960 Query: 961 NDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQKLRLAGCRIVLSQVGRDLQIFNSLKA 1020 NDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQKLRLAGCRIVLSQVGRDLQIFNSLKA Sbjct: 961 NDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQKLRLAGCRIVLSQVGRDLQIFNSLKA 1020 Query: 1021 NMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVD 1080 NMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVD Sbjct: 1021 NMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVD 1080 Query: 1081 LIYGEVIADAQPLDLLVNSSYFAIN 1105 LIYGEVIADAQPLDLLVNSSYFAIN Sbjct: 1081 LIYGEVIADAQPLDLLVNSSYFAIN 1105 >UniRef50_A1JKY3 Putative inner membrane protein n=11 Tax=Enterobacteriaceae RepID=A1JKY3_YERE8 Length = 1134 Score = 961 bits (2483), Expect = 0.0, Method: Compositional matrix adjust. Identities = 492/1101 (44%), Positives = 719/1101 (65%), Gaps = 11/1101 (0%) Query: 16 LLHLVSLGLVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRHAGRMWPGIALSCSLG 75 LLH+ + +V F+ LF + LS+ LAPLWFPT+++MVA + H R W L+ + Sbjct: 34 LLHITIISIVVFLLALFCIRLSEQSENLAPLWFPTAVLMVALFHHPMRYWSWQLLAAGIS 93 Query: 76 NIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQNLADWLRLALGSAIVP 135 IAA+ +L+ S + T IN+ EA GA LLRK L +PL NL WL+ ++ + I+ Sbjct: 94 IIAANFILYGISGFPLPLTLINLTEAAAGAWLLRKFLQPKDPLNNLFSWLKFSVCTVILV 153 Query: 136 PLLGGVLVV-LLTPGDDPLRAFL-IWVLSESIGALALVPLGLLFKPHYLLRHRNPRLLFE 193 PLL G+ L P + L +W +SE+IG LAL P+GLL++ Y + LF+ Sbjct: 154 PLLSGLAAAWYLAPQNGSFTQVLTVWFMSEAIGMLALGPVGLLYRRGYFNITNKTKALFD 213 Query: 194 SLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAAD 253 + + ++L+ ++ ++YLP+PFTFII+ L+W+++RLPR E F I +++++M+ + Sbjct: 214 MIWMMIVSLSACYIGLMYLPFPFTFIIMALIWTSIRLPRFETFTICFLATLLIAMMINFN 273 Query: 254 PSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAI 313 L + ++P L++L+P + M MVM+AFR E++HI ESE FRNAMEYSAI Sbjct: 274 LFTLQVDTKLSVQAFSFIPLLMVLIPPHAMAMVMHAFRMEKEHIVESENRFRNAMEYSAI 333 Query: 314 GMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINT 373 GMALV EG+W+Q N+ALC+ LGY QE L LTFQQ+T PEDL+ DL+ ++ L G I + Sbjct: 334 GMALVSPEGKWMQVNQALCKLLGYRQETLLTLTFQQITHPEDLSADLKLLDDLYHGHIPS 393 Query: 374 YSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITL 433 YSMEKRY +G+VVWALL VS+VR PLY+I+Q+EDIN+LK++E VN++LMERITL Sbjct: 394 YSMEKRYIRSDGEVVWALLVVSVVRDHAQQPLYYISQVEDINDLKKSEIVNRRLMERITL 453 Query: 434 ANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRD 493 ANEAGGIGIWE +++ + SWDKRM+ELY IP + + VW + + PED ++ Sbjct: 454 ANEAGGIGIWELDIRKQLISWDKRMYELYHIPFNTPVDETVWQQYIHPEDINRVKREYSA 513 Query: 494 SLQSRSPFKLEFRITVKDG-IRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQ 552 +L R P++L+FR+ + +G I H+R AN + +K G + RL+G +DMTE++ L EAL + Sbjct: 514 ALTQRQPYRLDFRLLLPNGDIVHLRNQANMICDKNGNILRLIGTTLDMTEIRNLTEALHE 573 Query: 553 EKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNG 612 EKERLHITLDSIGEAVVC D MKITFMNPVAEKM+GW ALG P+ ++ +T G +G Sbjct: 574 EKERLHITLDSIGEAVVCTDQEMKITFMNPVAEKMTGWANTIALGQPIQHIIKLTNGVDG 633 Query: 613 PLMEN-IYSADTSR--SAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVT 669 P ++N I T R S++ + +VLH R G YD+ S+ PL TL+G+ +G+VLV QDV Sbjct: 634 PEIDNPIEHCLTHRPYSSLNESIVLHHRDGQYYDIQESVAPLKTLEGTVVGAVLVFQDVG 693 Query: 670 ESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVND 729 ESR M+R+LS+SASHD LT L NRA+FE +L+ +Q Q+HAL F+DLD FKAVND Sbjct: 694 ESRAMMRKLSHSASHDNLTGLPNRANFENKLKAAIQKSIDFDQQHALAFLDLDYFKAVND 753 Query: 730 SAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVN 789 +AGH AGDALL+EL+ LM LR+SD +ARLGGDEFGLL+ +C + A+ I ++S +N Sbjct: 754 TAGHPAGDALLKELSQLMRQHLRNSDCVARLGGDEFGLLMLNCTLPHAKAITQSLVSMIN 813 Query: 790 DYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAA 849 YHF WE +++R+GASAG+T I +N Q +E+M+QADIACY +K+ GRG+V +Y+P+Q Sbjct: 814 GYHFYWEDKLYRIGASAGVTQISSSNSQRSEIMAQADIACYTAKHSGRGQVYLYQPRQKQ 873 Query: 850 AHS-ERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQT 908 + + +S +E ++ ENQL++ A P+ P + + +SL++ + ++ + Sbjct: 874 LLARQHELLSREEVESILSENQLLLQVTPTAPPKTPLSVCFYQVSLEIDRPQSPLVSQSA 933 Query: 909 FRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLE 968 F + + L +D + + A+A+ KG+++++PLS A L LL ++ Sbjct: 934 FEEAATLYNLLPKVDSWICEQLLVDHAQAIHQKGLALAIPLSEAALLKEDFRQSLLTLVQ 993 Query: 969 NSPLPPRLLHLIIPAEAILDHAESV----QKLRLAGCRIVLSQVGRDLQIFNSLKANMAD 1024 + LPP+ L+ +I +L + ++ KL+ GC++++ + G +L F L + D Sbjct: 994 QTLLPPQSLYWMIDESTLLQYPFAIGNFLAKLQQPGCKLIVKEFGHNLNDFELLAEHHID 1053 Query: 1025 YLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYG 1084 YL + EL A++ N MDE+LI+II G AQR + T+AGPV LP + L IGVDL G Sbjct: 1054 YLKFNSELIAHIHINQMDEVLISIINGTAQRANIATLAGPVELPPTLSKLIDIGVDLADG 1113 Query: 1085 EVIADAQPLDLLVNSSYFAIN 1105 +I +PL ++NSSYFAI Sbjct: 1114 TMIGRTEPLSEVLNSSYFAIK 1134 >UniRef50_B5EXV2 PAS domain protein n=33 Tax=Enterobacteriaceae RepID=B5EXV2_SALA4 Length = 998 Score = 859 bits (2220), Expect = 0.0, Method: Compositional matrix adjust. Identities = 419/589 (71%), Positives = 494/589 (83%), Gaps = 11/589 (1%) Query: 521 NRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFM 580 N + E E +RL M + Q NEALFQEKERLHITLDSIGEAVVCID+AM ITFM Sbjct: 417 NDLKQSEQENQRL------MERITQANEALFQEKERLHITLDSIGEAVVCIDVAMNITFM 470 Query: 581 NPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGG 640 NP+AEKMSGW QE+ALG PLLTVL IT G+ GPL+E+IY AD SRS +EQ++VLHC +GG Sbjct: 471 NPIAEKMSGWRQEDALGAPLLTVLRITSGNKGPLLEDIYRADRSRSDMEQEIVLHCHNGG 530 Query: 641 SYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQL 700 SYD+HYSITPLSTLDG IGSVLVIQDVTESRKMLRQLSYSA+HDALTHLANRASFEKQL Sbjct: 531 SYDIHYSITPLSTLDGDKIGSVLVIQDVTESRKMLRQLSYSATHDALTHLANRASFEKQL 590 Query: 701 RILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARL 760 + LQT+ + Q HALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRS D+LARL Sbjct: 591 QQRLQTIQESPQHHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSGDLLARL 650 Query: 761 GGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAE 820 GGDEFGLLLPDCN +SARFI TR+I+AVN+YHF+WEGR+HR+GASAGIT+I+++N Q E Sbjct: 651 GGDEFGLLLPDCNSDSARFIVTRLINAVNEYHFMWEGRLHRIGASAGITMINEHNCQLTE 710 Query: 821 VMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVAS 880 V+SQADIACYA+KN GRGR+TVYEPQ A S + M L+EQW MIK N L+MLA VA Sbjct: 711 VVSQADIACYAAKNSGRGRLTVYEPQHALT-SSKGMMPLEEQWHMIKNNHLLMLARNVAP 769 Query: 881 PRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS 940 PR PEA + WL+SL+LW+ EGE+++E+ FR +D AL HALDRRVFHEFF AA AVAS Sbjct: 770 PRTPEATSFWLVSLRLWTSEGEVMEERAFRAGLADSALHHALDRRVFHEFFHHAATAVAS 829 Query: 941 KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKL 996 KG+S++LPLS AGL SATL+++LLEQLE+SPLPPRLLHLIIPA+ I+ A+ +++KL Sbjct: 830 KGLSVALPLSAAGLYSATLIDELLEQLEHSPLPPRLLHLIIPADVIVKQAQTAAATLRKL 889 Query: 997 RLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRL 1056 R GC+++LS VGRDLQ+FN L ++ DYLLLD +L ANV +LMDEML +IIQGHAQ L Sbjct: 890 RQRGCQVILSHVGRDLQLFNLLPPHIVDYLLLDSDLIANVHESLMDEMLTSIIQGHAQHL 949 Query: 1057 GMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNSSYFAIN 1105 G+KT+AGPV P V+DTLS IGVDLIYG+ IA+AQPLDLL+N+SYFAI+ Sbjct: 950 GIKTLAGPVQNPQVLDTLSRIGVDLIYGDTIAEAQPLDLLLNTSYFAIH 998 Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/437 (76%), Positives = 385/437 (88%) Query: 1 MSKQSQHVLIALPHPLLHLVSLGLVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRH 60 MSK SQHV + +PHPLL LVSLGLV+F+FTLFSL LS+ GTQLAPLWFPTSIMMVAFYRH Sbjct: 3 MSKPSQHVFVTVPHPLLRLVSLGLVAFVFTLFSLVLSRVGTQLAPLWFPTSIMMVAFYRH 62 Query: 61 AGRMWPGIALSCSLGNIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQN 120 AGR+WPGIA++CSLG+I AS+ LF +SLN +WT INI+EA GA+LLRKLLP YNPLQN Sbjct: 63 AGRLWPGIAVACSLGSIGASLTLFPAASLNFSWTAINIIEAATGAILLRKLLPSYNPLQN 122 Query: 121 LADWLRLALGSAIVPPLLGGVLVVLLTPGDDPLRAFLIWVLSESIGALALVPLGLLFKPH 180 L DW RLA+GSA++PPLLGG+L L+ P +AFLIWVLSE+IGAL LVPLGLLFKPH Sbjct: 123 LNDWFRLAIGSAVIPPLLGGLLFWLIAPEAVASKAFLIWVLSEAIGALTLVPLGLLFKPH 182 Query: 181 YLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFL 240 YLLRHR+P LL E+LLTL ITL LSWL+M Y+PWPFT +IVLLMWSAVRLPRMEAFLIFL Sbjct: 183 YLLRHRDPHLLLETLLTLVITLALSWLAMRYIPWPFTCVIVLLMWSAVRLPRMEAFLIFL 242 Query: 241 TTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISES 300 TV++VSLM+A DP+LLATP+T +M +MPWLPFL+ILLPAN+MTMVMYAFR ERKHI+ES Sbjct: 243 ATVIVVSLMLANDPTLLATPKTDVMVNMPWLPFLMILLPANMMTMVMYAFRTERKHITES 302 Query: 301 ETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDL 360 E+ FRNAMEYSAIGMALVGTEGQWLQ NK+L FLGYSQ+ELR +TFQQLTWPEDLN DL Sbjct: 303 ESRFRNAMEYSAIGMALVGTEGQWLQVNKSLSHFLGYSQDELRTMTFQQLTWPEDLNNDL 362 Query: 361 QQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRT 420 +Q+ L+ G+IN+YSMEKRYY RNGDVVWALLAVSLVRH D PLYFIAQIEDIN+LK++ Sbjct: 363 EQLNMLVRGDINSYSMEKRYYTRNGDVVWALLAVSLVRHKDNQPLYFIAQIEDINDLKQS 422 Query: 421 EQVNQQLMERITLANEA 437 EQ NQ+LMERIT ANEA Sbjct: 423 EQENQRLMERITQANEA 439 >UniRef50_B2VFQ9 Putative sensor-type protein YegE n=1 Tax=Erwinia tasmaniensis RepID=B2VFQ9_ERWT9 Length = 877 Score = 838 bits (2164), Expect = 0.0, Method: Compositional matrix adjust. Identities = 420/828 (50%), Positives = 591/828 (71%), Gaps = 6/828 (0%) Query: 22 LGLVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRHAGRMWPGIALSCSLGNIAASI 81 L +SF+ T + LEL + Q++PLWF T++M V +R+ R P + C LG A+I Sbjct: 50 LACLSFVLTCYCLELIKVSGQISPLWFSTALMTVVVFRNPTRALPILLAGCILGLTCANI 109 Query: 82 LLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQNLADWLRLALGSAIVPPLLGGV 141 S ++ + IN+++A++G +LLR LL PL +L W ++ L + ++ L+GG+ Sbjct: 110 FFNGLSFYSLVFPLINLLQALLGGMLLRLLLEPDAPLNSLFSWAKMVLVAGLLTTLIGGL 169 Query: 142 LV--VLLTPGDDPLRAFLIWVLSESIGALALVPLGLLFKPHYLLRHRNPRLLFESLLTLA 199 + +L G L + IW +SE IG LAL P+GLL++ Y RH +LFE+LLTL Sbjct: 170 IACWLLQLTGHAALHFYAIWTVSEVIGMLALGPVGLLWRTDYARRHLRQSVLFETLLTLM 229 Query: 200 ITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLAT 259 TLTL W ++ Y P PFTF++V+L +SAVRLPR +AF+++L T++M+SLM+A T Sbjct: 230 ATLTLCWFTLRYAPSPFTFVVVILFYSAVRLPRFDAFVVYLATILMMSLMLAFQLIAPGT 289 Query: 260 PRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVG 319 + +PW+PFLL L+P+++MT+VM++FR ERKHISESET FR+AMEYSAIGMALV Sbjct: 290 SSLQQLIALPWVPFLLALIPSHMMTLVMHSFREERKHISESETRFRHAMEYSAIGMALVS 349 Query: 320 TEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKR 379 T GQW++ N++L + GYS EEL LT Q+LT P+DL+ + Q L++GEI TY++EKR Sbjct: 350 TSGQWIKVNQSLAKLFGYSPEELCELTAQELTHPDDLDTGVAQARALLAGEIETYNLEKR 409 Query: 380 YYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGG 439 Y+ R+G++VW LLAVSLVR ++ PLYFIAQ++DI ELK +E +N++LMERITLAN AGG Sbjct: 410 YFRRDGEIVWTLLAVSLVRDSEEQPLYFIAQVKDITELKHSENINKRLMERITLANVAGG 469 Query: 440 IGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRS 499 IG+WEW++ I SWDKRM ++Y++P + +P +Q W + P DR+ A +++++ + Sbjct: 470 IGVWEWDISNGIMSWDKRMLQIYQLPMNSQPTYQDWANRLHPADRERAMGSFNNAIKNAT 529 Query: 500 PFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHI 559 P +EFRI ++G+RHIR+ N + +++G+VER+LGIN D++ V+ L +AL+QEKER+HI Sbjct: 530 PVDVEFRIQTENGVRHIRSQCNTLCDEKGQVERMLGINQDISAVRLLTDALYQEKERMHI 589 Query: 560 TLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIY 619 TLD+IGEAV+ D M++TFMNPVAEKMSGW Q +A G L +L IT G G EN+ Sbjct: 590 TLDAIGEAVISTDEKMRVTFMNPVAEKMSGWLQHQASGKALNEILQITHGSRGSATENLL 649 Query: 620 SADTSR----SAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKML 675 + + ++ S ++ +VLH RSG + V+YS++PL TL G NIGSV+VIQDV+E+R+M+ Sbjct: 650 NCNLTQQKKSSDLDTGLVLHNRSGNQFAVNYSLSPLKTLAGENIGSVMVIQDVSEAREMM 709 Query: 676 RQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAA 735 R+LSYSASHD LT L NRASFE QL++L+++ Q H LVFIDLDRFKAVNDSAGHAA Sbjct: 710 RRLSYSASHDMLTRLPNRASFEHQLKLLIKSSVERRQHHMLVFIDLDRFKAVNDSAGHAA 769 Query: 736 GDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIW 795 GD LL E++ +M MLR+ DVLARLGGDEFG+LLP C+ E A + ++ AVN YHF W Sbjct: 770 GDRLLCEISHIMQQMLRADDVLARLGGDEFGVLLPICSPEEACEVIGSVVDAVNRYHFQW 829 Query: 796 EGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVY 843 +G HR+GASAG+T I +N E+M+QAD ACY +K+ GRG++ VY Sbjct: 830 DGHEHRIGASAGLTHISADNADITELMAQADRACYQAKHSGRGQLCVY 877 >UniRef50_A6V917 Membrane protein, putative n=6 Tax=Pseudomonas aeruginosa RepID=A6V917_PSEA7 Length = 1105 Score = 635 bits (1639), Expect = e-180, Method: Compositional matrix adjust. Identities = 397/1088 (36%), Positives = 600/1088 (55%), Gaps = 19/1088 (1%) Query: 23 GLVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRHAGRMWPGIALSCSLGNIAASIL 82 G + F+ L + LS+ +A +W P +I+ A R R WP I +L N+AA+ L Sbjct: 4 GALFFLAALACIYLSRQPATIAAIWLPNAILAAALLRAPLRQWPMILFCTALANLAANRL 63 Query: 83 LFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQNLADWLRLALGSAIVPPLLGG-- 140 + ++ + N+ EA A+LLR + NL +R+ A+VPPLLG Sbjct: 64 YGDSLWMSAAFLPANLSEATFAAMLLRMNRVREDFDFNLLSAVRVLWAGALVPPLLGASV 123 Query: 141 --VLVVLLTPGDDPLRAFLIWVLSESIGALALVPLGLLFKPHYLLRHRNPRLLFESLLTL 198 LV L G P + + W + +++G LAL+PL L + R ++ + L Sbjct: 124 GAALVSLFGLGSFP-QMWARWYVGDAMGMLALLPLCLASSLATWRHGLSGRAGVDNAMLL 182 Query: 199 AITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLA 258 TL +S++++ LP+ F ++++ L+ +A LI +++++A Sbjct: 183 LATLFISFVALTRLPYSFIYVLLPLLVAAASTSVFGTALIGCLNTCFIAVLIAMGVFAPE 242 Query: 259 TPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALV 318 + + + +LP L L+PA +++++M R E+ ++ E FR AME+SAIG ALV Sbjct: 243 SSQQRFGEPLLYLPMALTLIPAFLVSVIMERSRREQHQVAIGEAQFRGAMEFSAIGTALV 302 Query: 319 GTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEK 378 +G+ + N+ALC+ LGY E + LTFQ +T+ DL DL V L++G IN+Y MEK Sbjct: 303 ALDGRLFKVNEALCRMLGYPAERVGELTFQAITYAADLELDLDLVRDLLAGRINSYQMEK 362 Query: 379 RYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAG 438 RY ++G+ WA ++VSLVR +G YF+ Q+EDI+ KR E ++L ER+ LA +AG Sbjct: 363 RYLRQDGETFWARISVSLVRDEEGIAQYFVTQVEDIDSRKRAELERERLAERVKLATDAG 422 Query: 439 GIGIWEWELKPNIFSWDKRMFELYEIPPHI-KPNWQVWYECVLPEDRQHAEKVIRDSLQS 497 IGIWEW+L+ N WD RMF+LY I + + W + P+D + + +L Sbjct: 423 QIGIWEWDLRHNRLHWDFRMFDLYGIRSGPGETTVEQWQAALHPDDHERVLHELDRALSG 482 Query: 498 RSPFKLEFRITVKD-GIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKER 556 F EFRI D +RH+RA+A +++ R++GIN D+TE++ L E L++EKER Sbjct: 483 LQKFDCEFRIVRPDRQVRHLRAIATLTRDEDSRPVRMIGINSDITEIRTLAETLYEEKER 542 Query: 557 LHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLME 616 L +TL SIG+AV+ D ++TFMNPVAE M+GWT ++ALG P V ++ D G ++ Sbjct: 543 LQVTLYSIGDAVLTTDAGGRVTFMNPVAEAMTGWTLQDALGAPHELVFNVLDSDTGDTLD 602 Query: 617 NIYS---ADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRK 673 + +T +E L R G +D+ P+ T DG IG+VLV Q+VT++R Sbjct: 603 SPVRRCLQNTRVFYLEDGATLISRKGEQHDIQNCAAPVRTRDGEIIGTVLVFQNVTKARA 662 Query: 674 MLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGH 733 M R+LSY ASHDALT L NR FE++LR L +HAL FIDLDRFK VNDSAGH Sbjct: 663 MQRELSYHASHDALTGLFNRTKFEEELRRALANAQERASQHALCFIDLDRFKVVNDSAGH 722 Query: 734 AAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHF 793 AAGD LLREL+ ++ R+SD LARLGGDEFGLLL DC++ A +A+++I + F Sbjct: 723 AAGDMLLRELSRILADRTRASDTLARLGGDEFGLLLFDCDLAVAEEVASKLIEQICSVRF 782 Query: 794 IWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSE 853 WEGRV+ VGAS GIT + + +E+MSQAD+ACYA+K+ GR RV+VY+ + Sbjct: 783 PWEGRVYDVGASIGITALTATSRSTSELMSQADVACYAAKHAGRNRVSVYQFGHEEVERQ 842 Query: 854 RAAMSLDEQWRMIKENQLMMLAHGVASP---RIPEARNLWLISLKLWSCEGEIIDEQTFR 910 + L R EN L P R R+ L+ L+L+ +G++ F Sbjct: 843 HRDILLASGLREALENDRFQLQAQEIVPVVARRDGGRHYELL-LRLYDPDGQMTPPGAFI 901 Query: 911 RSFSDPALSHALDRRVFHEFFQQAAKAVAS-KGISISLPLSVAGLSSATLVNDLLEQLEN 969 + L ++DR V +E +A+ G++I + LS L+ + LL+++E+ Sbjct: 902 PAAERFNLMASIDRWVINEALINFGPRIAAIDGLTIGINLSGNSLNDPLFLPYLLDRIEH 961 Query: 970 SPLPPRLLHLIIPAEAILDH----AESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADY 1025 SPL P L+ + A+++ + V KLR GC++ L G L FN LK D Sbjct: 962 SPLGPERLYFELTETALMNQLSVASRIVDKLRDLGCKVALDDFGSGLSSFNYLKNFAVDA 1021 Query: 1026 LLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGE 1085 + +DG N+ + +D+ ++ I AQRLG T+A V ++D L+ +GVD G Sbjct: 1022 IKIDGSFVRNLDKSPVDQAIVDSINQIAQRLGAVTVAEFVESREILDHLARLGVDYAQGY 1081 Query: 1086 VIADAQPL 1093 + QP Sbjct: 1082 AVGRPQPF 1089 >UniRef50_Q0KDS7 Predicted signal transduction protein containinga membrane domain, an EAL and a GGDEF domain n=4 Tax=Cupriavidus RepID=Q0KDS7_RALEH Length = 1132 Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust. Identities = 336/884 (38%), Positives = 487/884 (55%), Gaps = 28/884 (3%) Query: 231 PRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAF 290 P A L + T+ + +LM+ A + +P ++++ P I + Sbjct: 244 PFATALLTLVATLCLQALMLLA----------HRHEAVPLSAAVIMVFPVCIAYLTEQN- 292 Query: 291 RAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQL 350 R R + S+ FR AME+SAIGMALVG +G+ N+A+ + LGYS EL L++QQL Sbjct: 293 RHGRASLRSSDKRFRQAMEHSAIGMALVGMDGRCQTVNRAMTELLGYSAAELHELSYQQL 352 Query: 351 TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVR-HTDGTPLYFIA 409 T P+DL DL+QV+ L+SG+I +Y +EKRY +++G W LLAVSLVR G P +FI Sbjct: 353 THPDDLTGDLRQVDNLLSGKIESYRLEKRYRHKDGHYRWVLLAVSLVRDEQTGEPQHFIT 412 Query: 410 QIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI-PPHI 468 Q+EDI+ K +Q ++L RI LA EAGG+GIWEW+ +WD RM L+ P Sbjct: 413 QVEDIHARKLAQQELERLSRRIQLAAEAGGVGIWEWDFTSAGVTWDARMHALHGTDPAGG 472 Query: 469 KPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLNKE 527 P + W + P+D +R +++ +PF E+RI G +RH+RA+A + Sbjct: 473 TPVVEQWIAMLHPDDVSRVSGEMRQAIRGEAPFDTEYRIARPGGDVRHVRAMAMVTRTDD 532 Query: 528 GEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKM 587 G + L+G N D+TE ++L EALF+EKERLHITL SIG+AV+C D AM +TFMNP+AE++ Sbjct: 533 GTAQALVGTNWDITEQRRLTEALFEEKERLHITLRSIGDAVICTDAAMHVTFMNPIAEQL 592 Query: 588 SGWTQEEALGVPLLTVLHI---TFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDV 644 +GWT A G+PL V I GD P + + ++ VL +G +DV Sbjct: 593 TGWTMASATGLPLEQVFRIVDEATGDPIPSPVEACLRTLAPAYLQDGAVLQSLTGERHDV 652 Query: 645 HYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILL 704 S P+ T G +G+VLV QD+T +R + R+L+ SA HDALT L NR FEK+LR Sbjct: 653 QDSAAPVLTARGEVLGAVLVFQDITTARALQRELARSAMHDALTGLPNRTWFEKRLREAC 712 Query: 705 QTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDE 764 R AL FIDLDRFK VND+AGH AGD LLREL ++ + +R DVLARLGGDE Sbjct: 713 DAARLHGHRAALCFIDLDRFKIVNDTAGHGAGDVLLRELGYMIRNHVRPDDVLARLGGDE 772 Query: 765 FGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQ 824 F LLL DC V+ A + +I A+ F WEGRV+ +GAS GI ID + +E+MS+ Sbjct: 773 FALLLKDCTVDQAEQVCQGVIDAIRGRRFPWEGRVYDMGASIGIAAIDLDVPPVSELMSR 832 Query: 825 ADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWR-MIKENQLMMLAHGVASPRI 883 AD+ACYA+K GR RV+VY ++ A + + ++ N+ + A + + + Sbjct: 833 ADVACYAAKAAGRSRVSVYRRDESDARRHHRELEVAAGIHSALEANRFRLFAQEIRALQP 892 Query: 884 PE----ARNLWL-ISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV 938 E A + + I +++ G++I F + L +DR V + + + Sbjct: 893 EENEDGAEHCHIEILVRMVDEHGDLIMPGAFIPAAERYDLMGHVDRWVIRNVLRGYGERL 952 Query: 939 -ASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQKL- 996 A G+S+S+ LS L L+ L +LE S LP + L I A++++ + +L Sbjct: 953 GAVPGLSVSINLSANSLGEPFLLPFLHAELEASALPASRIRLEITETALINNMAAANRLV 1012 Query: 997 ---RLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHA 1053 R AGC + L G L F LK D+L +DG + N +D +++ I Sbjct: 1013 TEMRRAGCTVSLDDFGSGLSSFAYLKQFPVDFLKIDGSFIRQLADNAVDREIVSSINDIG 1072 Query: 1054 QRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 RLG++T+A V +D L IGVD G VI LD+ + Sbjct: 1073 HRLGVRTVAEWVEDERTLDALRAIGVDYAQGYVIGRPVALDVFL 1116 >UniRef50_B4X4M1 PAS fold family n=2 Tax=Alcanivorax RepID=B4X4M1_9GAMM Length = 864 Score = 495 bits (1275), Expect = e-138, Method: Compositional matrix adjust. Identities = 296/844 (35%), Positives = 451/844 (53%), Gaps = 17/844 (2%) Query: 275 LILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQF 334 ++LL A + V+ RAE + +SE FR AM++S+IGMAL+ G+W N ALC Sbjct: 13 VVLLAALFLRCVLRRNRAELAQVKDSEIRFRLAMKHSSIGMALLSPRGEWQAVNHALCDL 72 Query: 335 LGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAV 394 GY + L +FQ ++ P+DL K + L+SG+I YS+E+R+ R GD +W L+V Sbjct: 73 AGYDEAGLLSTSFQDISHPDDLLKSRGMLADLLSGDITGYSLEQRFITRRGDDLWVRLSV 132 Query: 395 SLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSW 454 S VR +G Y IAQ+E+I+ K +EQ Q+ R+ +A E GG+GIW++ + ++ W Sbjct: 133 SAVR-VEGQVSYLIAQVENIHAAKLSEQALQESRHRLQMALEVGGVGIWQYSPQSDVLFW 191 Query: 455 DKRMFELYEIPPHIKPNW--QVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG 512 D+RM+ELY + P + Q+W + V P+D + + EFR G Sbjct: 192 DERMYELYGVQPGAPGDGTLQIWRDQVHPDDYTDINAAFQRVIAGEEDLDTEFRTLRPGG 251 Query: 513 -IRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCI 571 IRHIR A V+ +G ++G N D+T K + ++L EKERL +TL SI + VV Sbjct: 252 EIRHIRVRAETVVRSDGAETLVVGTNWDVTAEKGMQQSLAHEKERLRVTLTSIADGVVAT 311 Query: 572 DMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPL-MENIYSADTSRSAI-- 628 D ++TFMNPVAE ++GW + EA G+P+ +L ++ DN + + N S S + Sbjct: 312 DEIGRVTFMNPVAESLTGWREAEAEGLPVGDILMLS-DDNATMPIPNPISVALSGGDVCF 370 Query: 629 -EQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDAL 687 + +L R G Y++ S PL + DG G+V+V +DVT R M ++L Y A+HDAL Sbjct: 371 LREGSMLQSRDGSRYEIQDSAAPLKSADGQVTGAVMVFRDVTSRRAMQKKLRYHATHDAL 430 Query: 688 THLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLM 747 T L NR FE L+ L + H L FIDLDRFK VND+AGH AGDALLRE A ++ Sbjct: 431 TGLTNRREFENTLQESLDEPGAEHS--MLCFIDLDRFKVVNDTAGHVAGDALLRECARVI 488 Query: 748 LSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAG 807 +R DV+ARLGGDEFGLLL C + A IA R+I A+ D F W+ ++ +GASAG Sbjct: 489 GRQVREGDVVARLGGDEFGLLLRHCPAQRAIQIAERLIGALGDIRFAWKESLYDIGASAG 548 Query: 808 ITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWR-MI 866 + +D N E MS+AD+ACYA+K+ GR RV+VY P + A + + R + Sbjct: 549 LVQLDANVITVEEAMSRADVACYAAKHRGRNRVSVYTPDDSEASRRHLELQMAAGLRESL 608 Query: 867 KENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRV 926 + N+ ++ A + + + + L+L G+I++ +F + + +DR V Sbjct: 609 ESNRFLLYAQEIRPIDASTEPSHYEVLLRLRDRNGDILNPGSFIPAAERYQMMPHIDRWV 668 Query: 927 FHEFFQQAAKAVAS-KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEA 985 + + +A+ ++I++ LS L T + L L + L P L I Sbjct: 669 LTQLLVSLSDELAALPQLNIAINLSATSLDDPTFMPFLESLLSKTSLSPERLTFEITETT 728 Query: 986 ILDHAESVQ----KLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLM 1041 +++ S ++R GC++ L G F+ LK D++ +DG N+ + + Sbjct: 729 VVNQLSSASDLLGRIREQGCKVALDDFGSGFSSFSYLKHFPVDFIKIDGSFVRNLLHSSV 788 Query: 1042 DEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNSSY 1101 D ++ I A RLG+KT+A V ++ L GVD + G I QPL L + Sbjct: 789 DRTIVESINEVAHRLGVKTVAEYVEEHALIGVLEEAGVDFVQGYAIGRPQPLSALFEQQH 848 Query: 1102 FAIN 1105 + Sbjct: 849 RGVG 852 >UniRef50_C4LCA0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LCA0_TOLAT Length = 849 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 253/694 (36%), Positives = 388/694 (55%), Gaps = 16/694 (2%) Query: 157 LIWVLSESIGALALVPLGLLFKPHYLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPF 216 + W ++ I +++ +PL LL K R N + L L + L + L + Y P+PF Sbjct: 159 ITWYINSVICSISAMPLLLLIKH----RRWNRDQPWLLALNLLLLLGYTALVLKYFPFPF 214 Query: 217 TFIIVLLMWSAVRL----PRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLP 272 ++ + L A+R + FL+ + + + A P +L+ +LP Sbjct: 215 VYLGLGLALIAIRNGVFGAALAGFLVSFCIAVFIRMAWFAWPQY----DQHLLMLFVYLP 270 Query: 273 FLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALC 332 L+ L+P ++ + + + + E+ FR AME SA+GMALV T+GQ L+ N ALC Sbjct: 271 ILITLIPPLLLAIFVDTLHTREQQLLARESMFREAMEASAVGMALVSTDGQLLKVNPALC 330 Query: 333 QFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALL 392 L YS+ EL L++ QL P+DL + + ++L++ + ++Y +E RY +NG ++W LL Sbjct: 331 HMLDYSETELADLSWSQLIHPDDLGMEQRYQQRLLNNQQSSYRLEVRYRRKNGQMIWVLL 390 Query: 393 AVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIF 452 VS+VR G P YF+ Q EDI+ +R+E+ ++L R LA EAG +G+WEW Sbjct: 391 VVSMVRDDRGLPHYFVLQAEDIDRRRRSEERERELFNRYLLAAEAGQVGVWEWRPSEQQM 450 Query: 453 SWDKRMFELYEIPPH-IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRIT-VK 510 +WD+RMF+LY + H I P++ VW C+ P+D K I +L + EFR+ Sbjct: 451 NWDERMFDLYALDRHHIVPSFSVWKSCIYPDDLPRILKEISAALNETNVLDSEFRVKHYD 510 Query: 511 DGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVC 570 D I ++R A + G V R++G N D+TE++ L L +E+E L TL SIGEAVV Sbjct: 511 DSIHYLRIHAMVERDAVGGVWRMVGTNWDITELRVLMNDLSRERELLRTTLLSIGEAVVM 570 Query: 571 IDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIE- 629 D ++I FMNP AE M + +A + ++H+ D L +++A R I Sbjct: 571 TDQNVRIIFMNPAAEHMLDCSNRKASHRSVDRIMHLVDADGHALENPLHTALRQRRLIHL 630 Query: 630 -QDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALT 688 D L G + S P+ + +G VLV DVTE R + +QL Y ASHD LT Sbjct: 631 SNDAYLKKADGSMTAIQDSAAPILRNNDELLGGVLVFSDVTEMRALQKQLGYQASHDPLT 690 Query: 689 HLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLML 748 L NR++FE L+ +++ T + LV++DLD FK VND+AGHAAGD LLR+LA +M Sbjct: 691 GLINRSAFETILQDVVKESVMTAGQSVLVYLDLDYFKRVNDTAGHAAGDELLRQLAGVMS 750 Query: 749 SMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGI 808 S +R+SD++ARLGGDEFGL+L +C+VE A +IS + + F W ++ VGASAG+ Sbjct: 751 SRMRASDIVARLGGDEFGLILRNCSVEYAESFMNGLISEICKFEFCWNEQIFHVGASAGL 810 Query: 809 TLIDDNNHQAAEVMSQADIACYASKNGGRGRVTV 842 ++ + +++ AD ACYA+K GRG+V + Sbjct: 811 APVNGQFSAFSALLASADQACYAAKRAGRGQVKI 844 >UniRef50_B8GT56 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Chromatiales RepID=B8GT56_THISH Length = 958 Score = 363 bits (931), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 230/714 (32%), Positives = 371/714 (51%), Gaps = 33/714 (4%) Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP 466 F E I ++ + N + +ER A G +G WEW+++ W +++ ++ + P Sbjct: 247 FDRMAEQIQAARKALEDNAERLER---AQAMGQMGDWEWDVQTGTLHWSPQLYCIFGVSP 303 Query: 467 H-IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVL 524 P++ + + V PEDR + + S P+ L+ RI DG IR I++ + Sbjct: 304 ESFTPSYDGYLDLVHPEDRPALLATVEAARSSGEPYTLDHRIVRPDGSIRVIQSQGEALR 363 Query: 525 NKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVA 584 + +G + +L G +D+TE KQ ALF+ KER +TL SIG+AV+ D +T++NPVA Sbjct: 364 DADGRIIKLRGTGLDVTERKQAEAALFEAKERALVTLHSIGDAVITTDAQGIVTYLNPVA 423 Query: 585 EKMSGWTQEEALGVPLLTVLHITFGDNG--PLMENIYSA--DTSRSAIEQDVVLHCRSGG 640 E ++GW EA G PL V I F + P + + + + A+ VL R G Sbjct: 424 EGLTGWRSSEATGQPLTKVFRI-FNEFTLQPTQDPVKTCLEEGRIVALANHTVLMSRDGA 482 Query: 641 SYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQL 700 + + S P+ +G +G VLV DV+++R+M RQLS+ A+HDALT L NR FE++L Sbjct: 483 TRAIEDSAAPIRDRNGLILGVVLVFHDVSKTRQMARQLSWQATHDALTGLFNRYEFEQRL 542 Query: 701 RILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARL 760 L HA++++DLD+FK VND+ GH+AGD LL++LA L++ +R SD LARL Sbjct: 543 AQALAQARDRLAHHAVLYMDLDQFKVVNDTCGHSAGDELLKQLAYLLMGKVRESDTLARL 602 Query: 761 GGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAE 820 GGDEFG+LL +C ++ AR IA + V D+ F W+G+ ++G S G+ +I D N AE Sbjct: 603 GGDEFGVLLENCPLDKAREIAQELRQTVRDFRFSWKGKSFQIGISIGLVMISDGNLDLAE 662 Query: 821 VMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAM-SLDEQWRMIKENQLMM-----L 874 V+S AD+ACYA+K+ GR R+ VY + A M +++ + ++ ++ + Sbjct: 663 VLSAADMACYAAKDLGRDRIHVYHAEDADLQRRHVEMQAINRITDALTHDRFVLYTQRIV 722 Query: 875 AHGVASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQA 934 A G A P + I L++ +G+++ F + L A+DR V FF Sbjct: 723 ATGAAGP--DDGGEHMEILLRMVDEKGDLVPPGAFIPAAERYDLMPAIDRWVIRRFFSTM 780 Query: 935 AKAV-----------ASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPA 983 A+ + ++ G ++ +S A ++ T + + EQLE +PP + I Sbjct: 781 AQHIREECGVDGSGGSASGCLYAINISGASINDETFLGFVTEQLETHRIPPTAICFEITE 840 Query: 984 EAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGN 1039 A + + + +LR GCR L G + F LK DYL +DG L ++ + Sbjct: 841 TAAIANLTRAMNLINELRKRGCRFSLDDFGTGVSSFGYLKNLPVDYLKIDGSLVKDIVSD 900 Query: 1040 LMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPL 1093 +D ++ I Q +G+ T+A V ++ +L +GVD G I +PL Sbjct: 901 PIDRAMVDAINRIGQVMGIHTVAEFVENDEILASLRELGVDYAQGYGIDRPKPL 954 >UniRef50_C5BBK6 PAS fold family n=2 Tax=Edwardsiella RepID=C5BBK6_EDWI9 Length = 1010 Score = 350 bits (898), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 213/625 (34%), Positives = 332/625 (53%), Gaps = 19/625 (3%) Query: 479 VLPEDRQHAEKVIRDSLQSR-SPFKLEFRITVKDG--------IRHIRALANRVLNKEGE 529 + P DR ++ + D L + LE R + G + +R VL + Sbjct: 357 IYPPDRLSDKRQLADLLAGHIDSYTLEKRYVHRSGRIIWTLLTVSLVRPPQAEVLYFVAQ 416 Query: 530 VERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSG 589 ++ + I + + ++L + L QE+ERLHITL +IGEAV+ D + FMNP AEKM+G Sbjct: 417 MKEINDIKHNERQKQRLLDTLHQERERLHITLSAIGEAVISTDPQQIVRFMNPSAEKMTG 476 Query: 590 WTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQD-VVLHCRSGGSYDVHYSI 648 W Q A+G PL ++ + +G + + AD E D V L R+G Y++ + Sbjct: 477 WAQSRAIGRPLGQIVTLQDSVSGAALPVLRPADEGSGGAESDGVRLISRTGQRYEIQSRV 536 Query: 649 TPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVN 708 L DG +G V+V QDV+E+R +LRQLSYSA HD LT L NR SFE+ LR L++ Sbjct: 537 AELRHSDGVMLGYVVVFQDVSETRTLLRQLSYSAQHDPLTGLPNRVSFEQALRRALRSAI 596 Query: 709 STHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLL 768 + + H LVF+DLD FKA+NDS GHAAGD LL+ +A +M S+LR D LARLGGDEF ++ Sbjct: 597 DSPRHHVLVFLDLDYFKAINDSVGHAAGDTLLQNIAQMMRSLLRPQDTLARLGGDEFAMI 656 Query: 769 LPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIA 828 L DC++ + + ++I + Y F W+G V+R+GASAG+TL+ N A EV++QAD A Sbjct: 657 LNDCDIAQGKRMVEQLIHKIAAYRFYWQGGVYRIGASAGLTLLWHRNVLADEVINQADAA 716 Query: 829 CYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQ--LMMLAHGVASPRIPEA 886 CY +K GRG +T H D + +L V P Sbjct: 717 CYMAKRSGRG-LTFCHQGDTLRHPPHGVHEPDAAQLNALLAAQPITLLLRAVCPRSAPRQ 775 Query: 887 RNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISIS 946 +L+ + +G + + ++R +F + + A A+ + ++++ Sbjct: 776 ILFYLLDPEARRPDGSPLSPPALATACLRHQRQQDIERWLFSQLLIRHAPALRQQPLALA 835 Query: 947 LPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH----AESVQKLRLAGCR 1002 + LS A L T V+ L + L +SPLP R L L + A+++H A ++ L GCR Sbjct: 836 VSLSTASLCQPTFVSWLCDTLRSSPLPARQLLLRLEESALIEHQAQTAPALSALHHCGCR 895 Query: 1003 IVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIA 1062 ++ L+ L+ + +YLL+ E A+ N MD ++++ + A+ G++TIA Sbjct: 896 LIAEGFEHRLENIAGLEHSPVEYLLISSERVAH--ANHMDGIMLSRLHTQARSCGLQTIA 953 Query: 1063 GPVVLPLVMDTLSGIGVDLIYGEVI 1087 GP LP + TL+ +G+DL++G + Sbjct: 954 GPAELPATLATLNLLGIDLLFGSSV 978 Score = 215 bits (547), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 146/405 (36%), Positives = 226/405 (55%), Gaps = 23/405 (5%) Query: 43 LAPLWFPTSIMMVAFYRHAGRMWP---GIALSCSLGNIAASILLFSTSSLNMTWTTINIV 99 L LW PT+ + R WP GIAL SL + F + I+ + Sbjct: 50 LPSLWLPTAATTAVLFHCRRRDWPLLMGIALPASLLPLLLHPTYFPPLHYGLPHALIDQL 109 Query: 100 EAVVGAVLLRKLLPWYNPLQNLADWLRLALGSAIVPPLLGGVLVVLLT--------PGDD 151 +A++ A+ LR+ L +PL NL W L + + PLL L L PG Sbjct: 110 QALLSALALRRCLHGSSPLGNLVQWAYFILIAVLAIPLLCATLAAGLATLLHRDAFPGSA 169 Query: 152 PLRAFLIWVLSESIGALALVPLGLLFKPHYLLRHRNPRLLFESLLTLAITLTLSWLSMLY 211 AF+ ++++G LAL PLGLL +P L+ +P +++L L ITL + ++ Sbjct: 170 GF-AFM----ADALGMLALTPLGLLARPAGGLKRLSP---LKTILILLITLVSGYYALPL 221 Query: 212 LPWPFTFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWL 271 LP+PFTFI++ L+W+AV LP AFLIF T +++ M + A T + ++ Sbjct: 222 LPYPFTFILMPLLWAAVALPLWPAFLIFCCTALLLCAQMNSH----AVAITSTPPLLLYI 277 Query: 272 PFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKAL 331 P LL+LLPA+ + + +A+R E + + E+ET RN MEYSAIG AL+ G+W+Q N AL Sbjct: 278 PILLVLLPAHAIAIQTHAYRRESQRLEENETRLRNVMEYSAIGTALIDLRGRWIQFNPAL 337 Query: 332 CQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWAL 391 C+ LGY L+ L ++ L +P D D +Q+ L++G I++Y++EKRY +R+G ++W L Sbjct: 338 CRMLGYDAAILQRLRYRSLIYPPDRLSDKRQLADLLAGHIDSYTLEKRYVHRSGRIIWTL 397 Query: 392 LAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANE 436 L VSLVR LYF+AQ+++IN++K E+ Q+L++ + E Sbjct: 398 LTVSLVRPPQAEVLYFVAQMKEINDIKHNERQKQRLLDTLHQERE 442 >UniRef50_B2J5P2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Nostocaceae RepID=B2J5P2_NOSP7 Length = 1224 Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 225/770 (29%), Positives = 379/770 (49%), Gaps = 37/770 (4%) Query: 346 TFQQLTWPED---LNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDG 402 TF Q+ +PED L + L Q + +G N +++E R +G + + + T G Sbjct: 467 TFLQMLYPEDRPVLQRHLLQA--IANG--NPFNLEYRIVQPDGSLRYLESRAEVAYDTQG 522 Query: 403 TPLYFIAQIEDINELKRTEQVNQQ--LMERITLANEAGGIGIWEWELKPNIFSWDKRMFE 460 + I DI E K+ E +Q + R + ++ I + L ++ + F Sbjct: 523 KTVRLYGAILDITERKQAEIALKQSEIRYRAIVEDQTEFIARY---LPDGTITFVNQAFT 579 Query: 461 LY--EIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKL-EFRITVKDGIRHIR 517 Y P + + + + DR+ ++I ++ + +P + E R+ ++D +R + Sbjct: 580 RYFGRSPEQLIDS--CYQPIIFEADRERVAQLIA-AMNADNPVAIIENRVILEDSVRWTQ 636 Query: 518 ALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKI 577 + +++G + D+T +KQ+ E LFQEKE +TL SI +AV+ D +I Sbjct: 637 WHNRMLFDEQGCFIEFQTVGRDITALKQIEETLFQEKELAQVTLQSIRDAVITTDAFGRI 696 Query: 578 TFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAI---EQDVVL 634 ++NPVAE + G ++ A GV L V I ++N + I VL Sbjct: 697 QYLNPVAESLIGCSEASAKGVLLEEVFRIVHETTREKVKNPIEQALQENRIVSLANHTVL 756 Query: 635 HCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRA 694 + S P+ +G IG+V+V DVT++R + RQLS+ A+HDALT L NR Sbjct: 757 ITGRDQEIAIQDSAAPIRNREGQVIGAVMVFHDVTQNRLLSRQLSWQATHDALTGLVNRQ 816 Query: 695 SFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSS 754 FE+++ L +Q + L ++DLD FK VND+ GH AGD LLR++ L+ +R + Sbjct: 817 EFERRVEQALHVAKLDYQVYTLCYLDLDHFKIVNDTCGHVAGDELLRQITVLLQEKVRKT 876 Query: 755 DVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDN 814 D LAR GGDEFGLLL C +E A +A ++S V ++ F+W+ +V +G S G+ +ID N Sbjct: 877 DTLARFGGDEFGLLLTQCTLEEALRVANNLLSCVQEFRFVWQEQVFSIGVSIGLVVIDTN 936 Query: 815 NHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQW-----RMIKEN 869 + AE++S AD ACY +KN GR RV V + +R M QW + ++ + Sbjct: 937 SESLAEIISTADAACYTAKNRGRNRVYVAQTDDQERLQQRGQM----QWVGRISQALESD 992 Query: 870 QLMMLAHGVASPRIPEARN--LWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVF 927 + +A+ IP +N + + L+L +G+++ F + L H +DR V Sbjct: 993 WFCLYVQRIAAI-IPTDQNGDHYEVLLRLRDEQGKLVLPMAFIPAAERYNLMHLIDRWVI 1051 Query: 928 HEFFQQAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEA-- 985 F+ ++ V +K ++ LS + ++ ++ L EQ P+ P+ + I Sbjct: 1052 RTLFKNWSRVVDNKQSIYAINLSGSSINDDRFIDFLHEQFTLHPISPQHICFEITETVAI 1111 Query: 986 --ILDHAESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDE 1043 +L + +QKL+ GCR L G + F LK+ DYL +DG N+ N +D Sbjct: 1112 ANLLKARQFIQKLQRMGCRFALDDFGAGMSSFAYLKSLPIDYLKIDGSFIRNIVENPVDN 1171 Query: 1044 MLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPL 1093 ++T I + +G++TIA V +++ ++ +G+D G IA PL Sbjct: 1172 AIVTAITRISSVMGIQTIAEFVENDAILERITALGIDYAQGYGIAVPHPL 1221 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 85/358 (23%), Positives = 151/358 (42%), Gaps = 24/358 (6%) Query: 349 QLTWPEDLNKDLQQVEKLIS-GEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYF 407 QL PED K Q E+ +S GE +Y + R G ++ + DG + Sbjct: 335 QLYCPEDAGKLAQATERAMSTGE--SYQLILRASPIYGSTIYIEGIGHAEFNADGKVIRL 392 Query: 408 IAQIEDINE----LKRTEQVNQQLMERITL---ANEAGGIGIWEWELKPNIFSWDKRMFE 460 +D+ E L + +Q ++L TL A + +G WEW L W F Sbjct: 393 YGTAQDVTERQAALNKRKQAEEELRRSETLLATAQKIAHLGSWEWHLGSEKQIWSAETFR 452 Query: 461 LYEI-PPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRA 518 ++ + P P + + + PEDR ++ + ++ + +PF LE+RI DG +R++ + Sbjct: 453 IFGLNPAESVPTQATFLQMLYPEDRPVLQRHLLQAIANGNPFNLEYRIVQPDGSLRYLES 512 Query: 519 LANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKIT 578 A + +G+ RL G +D+TE KQ AL Q + R ++ E + IT Sbjct: 513 RAEVAYDTQGKTVRLYGAILDITERKQAEIALKQSEIRYRAIVEDQTEFIARYLPDGTIT 572 Query: 579 FMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVL---- 634 F+N + G + E+ + ++ + + +AD + IE V+L Sbjct: 573 FVNQAFTRYFGRSPEQLIDSCYQPIIFEADRERVAQLIAAMNADNPVAIIENRVILEDSV 632 Query: 635 -----HCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDAL 687 H R +D T+ G +I ++ I++ K L Q++ + DA+ Sbjct: 633 RWTQWHNRM--LFDEQGCFIEFQTV-GRDITALKQIEETLFQEKELAQVTLQSIRDAV 687 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 33/132 (25%), Positives = 66/132 (50%), Gaps = 2/132 (1%) Query: 413 DINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPH-IKPN 471 D+ +LKR E+ ++ + + + +G WE+EL +W K++F+L+ P ++PN Sbjct: 270 DVTDLKRVEETLRKSEALLEESQQVARLGNWEFELATGKITWSKQLFDLFNRDPELLEPN 329 Query: 472 WQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRIT-VKDGIRHIRALANRVLNKEGEV 530 +Q + PED + ++ + ++L R + + +I + + N +G+V Sbjct: 330 YQENLQLYCPEDAGKLAQATERAMSTGESYQLILRASPIYGSTIYIEGIGHAEFNADGKV 389 Query: 531 ERLLGINMDMTE 542 RL G D+TE Sbjct: 390 IRLYGTAQDVTE 401 >UniRef50_C8SU22 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SU22_9RHIZ Length = 657 Score = 315 bits (807), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 215/581 (37%), Positives = 321/581 (55%), Gaps = 44/581 (7%) Query: 293 ERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTW 352 +R+ I+ESE FR AME SAIG+A+VG +G+ ++ N A LGYS+EE+ LTF Q+T Sbjct: 69 DRRQIAESEQRFRRAMEDSAIGIAVVGLDGRIIEANPAFAAMLGYSREEIEALTFFQITH 128 Query: 353 PEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVR-HTDGTPLYFIAQI 411 P+DL + ++ L +G ++ + EKRY ++G +WA LA S++R T G PLY ++QI Sbjct: 129 PDDLQIGRETMDGLKAGTVHAFQFEKRYLKKDGTPIWAHLAGSVIRDETSGRPLYLVSQI 188 Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDK---RMF-----ELYE 463 EDI+ K+ E + R A G G+W+ + + ++ +M EL Sbjct: 189 EDIDARKQAEAHIAEAETRWNFALAGAGQGVWDLDTRKGGTTYSSTWVKMLGYADGELDG 248 Query: 464 IPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPF-KLEFRITVKDG-----IRHIR 517 P H W + P+DR+ R L + F + EFR+ KDG + + Sbjct: 249 DPDH-------WLTMIHPDDREAVATADRAHLDGNTEFFEAEFRMRHKDGHWVWILDRGK 301 Query: 518 ALANRVLNKEGEVERLLGINMDMTEVKQLNEALF-------QEKERLHITLDSIGEAVVC 570 A+ + G + R +G D+T K+ E L EKERL +TL SIG+AV+C Sbjct: 302 AIER---DAAGRLTRAIGSLTDITRRKEAEERLTVSAAMLADEKERLRVTLQSIGDAVIC 358 Query: 571 IDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQ 630 D A ++TFMNPVAEK++G + +EALG T+ H+ + + + I A + A Sbjct: 359 TDAANRVTFMNPVAEKLTGVSGDEALG---KTLGHVYWAVDEETGQRIGVARPAIGAAPS 415 Query: 631 D----VVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDA 686 D VL R + ++P+ G V+V QD T++R + RQL+++A+HDA Sbjct: 416 DQNSRAVLIRRDDTRCSIRQVVSPIINERSEFCGLVIVFQDFTDARALQRQLAHAAAHDA 475 Query: 687 LTHLANRASFEKQLRILLQ-----TVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLR 741 LT LANR+SF + + L+ T + RH +FIDLD FK VND+ GHAAGDALL+ Sbjct: 476 LTGLANRSSFIRTMEELVDQARKDTAAAGGGRHQFMFIDLDHFKLVNDTGGHAAGDALLK 535 Query: 742 ELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHR 801 +A + +L D++ARLGGDEF ++L + A A II A+ F W+ R H Sbjct: 536 RVAEAVRGVLGPEDIVARLGGDEFAVILKSASTAGAGIAARSIIDAIAGLDFTWDDRPHA 595 Query: 802 VGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTV 842 +GAS G+T I + + E++++AD ACYA+K GRG V+V Sbjct: 596 IGASIGLTAICADCGEVDEIIARADAACYAAKAAGRGCVSV 636 >UniRef50_Q2YC85 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YC85_NITMU Length = 951 Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 240/833 (28%), Positives = 394/833 (47%), Gaps = 63/833 (7%) Query: 302 THFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQ 361 T F N ++ G+ +V + G+ + N + GYS EL G + L P Sbjct: 134 TKFGNLLDSIPDGIVIVNSTGRIVLVNTQTEKLFGYSAHELCGQPVEMLLPP-------- 185 Query: 362 QVEKLISGEINTY-----------SMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQ 410 + L SGE Y E + ++G +++S + +G + I+ Sbjct: 186 RKRGLHSGERAAYFTHPHSRTLVADWELYGFRKDGTEFPVEISLSPIETDEGR--FSISA 243 Query: 411 IEDINELKRTEQVNQQLMER----ITLANEAGGIGIWEWELKPNIFSWDK-----RMFEL 461 I DI++ K+ EQ + L+E I + N G I + + + +F + + + E+ Sbjct: 244 IRDISDRKKAEQKFRGLLEAAPDAIVIVNRNGEIVLVNSQTE-KLFDYQREQLLGKKMEM 302 Query: 462 YEIPPHIKPNWQVWYECVLPEDRQHAEKV-------IRDSLQ-----SRSPFKLEFRITV 509 IPP + + E R + RD + S SP + E I V Sbjct: 303 L-IPPRYRSKHPGFREDFFRAPRTRPMGIGLELYGLRRDGTEFPVEISLSPLETEEGILV 361 Query: 510 KDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVV 569 IR I R KE + + + D+TE + +ALF+EKE L +TL IG+AV+ Sbjct: 362 SSAIRDI---TERKRTKEIQTQ----LRRDLTEREIAEKALFEEKELLRVTLSCIGDAVI 414 Query: 570 CIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSA---DTSRS 626 D +T++NPVAE M+G + ++A G+PL V I + L + + Sbjct: 415 TTDTEGSVTYLNPVAEAMAGCSSDDAKGLPLQDVFQIIHAETNELASSPAERVLRNKETV 474 Query: 627 AIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDA 686 ++ +L R G ++ + S P+ +GS IG VLV +DV+ ++KM ++ Y A+HDA Sbjct: 475 SLNSHALLIRRDGQTFPIEDSAAPIRDQNGSIIGVVLVFRDVSHAQKMAMEMRYQATHDA 534 Query: 687 LTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASL 746 LT L NR FE++L+ +L+ + H L+++DLD+FK VND+ GH AGD LL++L SL Sbjct: 535 LTGLINRHEFERRLKQVLERDKGADE-HTLLYLDLDQFKIVNDTCGHLAGDELLKQLTSL 593 Query: 747 MLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASA 806 + + LR D LARLGGDEFGLLL C SA +A + V ++ F+WE R+ +G S Sbjct: 594 LQAKLRKDDTLARLGGDEFGLLLERCPRGSAFRVAEVLRQTVQEFRFVWEERIFSLGISI 653 Query: 807 GITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQW-RM 865 G+ ++V+ AD AC+ +K+ GR RV +Y R M E+ + Sbjct: 654 GLATFSGGEQTFSDVLRMADTACFLAKDKGRNRVQLYASDDKNLEKRRGEMGWVERLHKA 713 Query: 866 IKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRR 925 + + + ++ + + P + + + I L++ GE++ F + L LDR Sbjct: 714 LDKQRFVLYSQKILPLSAPSSTSHYEILLRMKGENGELVPPMAFIPAAERYGLMPQLDRW 773 Query: 926 VFHEFFQQAAKAVASKGI--SISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIP- 982 V F Q A + S+GI + ++ LS A + L + +++Q + S + P + I Sbjct: 774 VITNAFAQYA-SHPSRGIKDTCTINLSGASICDEHLYDFVVDQFKQSQIDPAGICFEITE 832 Query: 983 --AEAILDHAES-VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGN 1039 A A L A + ++KL+ GCR L G + F LK + DYL +DG + + Sbjct: 833 TVAIANLTQAATLIRKLKELGCRFSLDDFGSGMSSFTYLKHLLVDYLKIDGAFIKGMLSD 892 Query: 1040 LMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQP 1092 +D ++ I + ++TIA V ++ L IGVD G I + +P Sbjct: 893 PIDHAMVEAINHIGHVMKIQTIAEWVEEESFLEALRKIGVDYAQGYAIEEPRP 945 >UniRef50_Q3J9L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Nitrosococcus oceani RepID=Q3J9L4_NITOC Length = 811 Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 195/588 (33%), Positives = 304/588 (51%), Gaps = 18/588 (3%) Query: 519 LANRVLNKEGEVERL-LGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKI 577 L +VL + E+ + + D+ + ++ +ALF EKE L ITL SIG+ V+ + + Sbjct: 220 LEKKVLKRTAELAQANANLQRDIIKRQRAEQALFAEKELLQITLHSIGDGVITTNAEGIV 279 Query: 578 TFMNPVAEKMSGWTQEEALGVPLLTVLH-ITFGDNGPLMENIYSADTSRSAIE--QDVVL 634 ++NPVAEK++GW+ ++A G+PL TV I P+ + I AIE V+ Sbjct: 280 EYLNPVAEKLTGWSCDKARGLPLATVFRVIDEQTREPIADPIAQCLKEGGAIEIANHSVV 339 Query: 635 HCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRA 694 R+G Y + S P+S+ G +G VLV DVTE+R M RQ+++ A+HD+LT L NR Sbjct: 340 ISRNGQEYAIQDSAAPISSRTGEVLGVVLVFSDVTEARHMTRQITHQATHDSLTGLVNRR 399 Query: 695 SFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSS 754 FE +L +L T+ + +AL + DLDRFK +ND+ GH AGD LLR+++ ++ +R Sbjct: 400 EFEHRLERVLATLKAESAEYALCYFDLDRFKVINDTCGHVAGDELLRQVSEVLRGQIRKR 459 Query: 755 DVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDN 814 D LARLGGDEFG+LL C+++ A+ +AT I A+ D+ F WEG+ R+G S G+ I Sbjct: 460 DTLARLGGDEFGVLLEHCSLKQAQRVATAIHKAIEDFQFTWEGKSFRIGVSIGLVPITKA 519 Query: 815 NHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQW-----RMIKEN 869 + A V+ AD ACYA+KN GR R+ VY S R + QW R +KEN Sbjct: 520 SMGIAVVLKAADTACYAAKNKGRNRIHVYHETDKELASHRGEV----QWMTRIHRALKEN 575 Query: 870 QLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHE 929 + + + + + L+L G ++ F + L+ +DR + Sbjct: 576 YFQVYFQPIIPLATEKEEKCYEVFLRLEDGAGGVVLPGAFLPTAERYNLAVKIDRWMIAN 635 Query: 930 FFQQAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPP-RLLHLIIPAEAILD 988 F A+ + LS L + T + ++EQLE +P+P ++ I A A + Sbjct: 636 TFTWLAQNPEPLRTCF-INLSGHSLRNKTFLAFIIEQLEKTPIPSIQICFEITEAAATAN 694 Query: 989 HAES---VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEML 1045 + + ++ L+ GC+ L G L F LK D+L +DG ++ + +D + Sbjct: 695 LSCTIRFIKSLKSHGCKFSLDDFGSSLSSFAYLKNLPVDFLKIDGLFVKDILDDPIDLAI 754 Query: 1046 ITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPL 1093 + I Q + +TIA V V++ L IGV+ G I QPL Sbjct: 755 VRSINEIGQIMKKQTIAEWVEKEEVLEKLREIGVNYAQGYWINPPQPL 802 >UniRef50_B8GTY7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GTY7_THISH Length = 808 Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 245/812 (30%), Positives = 389/812 (47%), Gaps = 34/812 (4%) Query: 298 SESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEEL-RGLTFQQLTWPEDL 356 S FR E + M L+ G ++ N++ C LGYS EEL GL DL Sbjct: 4 SNDNLRFRLIFEQALDPMVLIDRHGGIVEANRSACASLGYSHEELVGGLHVTDF----DL 59 Query: 357 NKDLQQVEKLISGEINTY---SMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIED 413 N + V + + G + S + Y ++G A + ++ VR + ++ A D Sbjct: 60 NATREDVGR-VHGNPERHLPASFQSTYRRKDGSTFPAEVHINAVRVGEQAQVF--ATFLD 116 Query: 414 INELKRTEQVNQQLMERITLANEAGGIGIWEWELKPN-IFSWDKRMFELYEIPPHIKPNW 472 I+E E+ ++ ++ A + + ++ + N + S K + L +P Sbjct: 117 ISERLAAERTLREREHQLRTAITSAPMVLFSLDRHGNFMLSEGKGLEGLGLVPGQAVGMN 176 Query: 473 QVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVER 532 + PE + +R +L S P +LE R+ + + H + + + G Sbjct: 177 ALEMYGAYPE----VAEGLRRAL-SGEPVQLESRVEGRCFLHHWQPVPDEAAGGWG---- 227 Query: 533 LLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQ 592 +LG++ D+T +AL E++RL TL+SI + V+ D+A ++ +MNPVAE+++G+T Sbjct: 228 VLGVSYDITAQCLAEQALSGERDRLFTTLESIADGVITADVAGRVAYMNPVAEQLTGFTL 287 Query: 593 EEALGVPLLTVLHITFGDNGPLM----ENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSI 648 +A G P+ +L + ++G L+ E ++ S ++ L G SY V + Sbjct: 288 NQARGRPMEEILRVEDLESGELLPDPVERCFNG-GSPVVFSEESRLRRPDGESYAVRLTA 346 Query: 649 TPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVN 708 +PL + G+VLV+ D + M RQLS+ A HDALT L NR FE ++R L++ Sbjct: 347 SPLRDGEDGISGAVLVLHDFSMLWDMARQLSHQARHDALTGLINRREFEDRVREALESAR 406 Query: 709 STHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLL 768 + + HAL +IDLD+FK VND+ GH AGD LLR+LA+ + +R +D LARLGGDEFGLL Sbjct: 407 RSSRSHALCYIDLDQFKVVNDTCGHVAGDELLRQLAAALPRHIRDTDTLARLGGDEFGLL 466 Query: 769 LPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIA 828 L +C ++ A I ++++ V + F+W+GR VG S G+ ID + +EV+S+AD A Sbjct: 467 LENCPLDRALSICHQLLAEVAELRFMWQGRRFDVGMSIGLVAIDGASASLSEVLSEADSA 526 Query: 829 CYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARN 888 CY +K GR RV V P A + M + R E + L P E Sbjct: 527 CYVAKEQGRNRVYVSRPGDQALKTRFGEMEWLGRIREAMEEERFELYCQPIRPISGEGVP 586 Query: 889 LWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAK---AVASKGISI 945 + I L+L + +G +++ F + L +DR V F A A+ I + Sbjct: 587 HFEILLRLKAEDGSLVEPGAFIPAAERYNLMPQVDRHVIRSVFAMLADSDFALKQHAI-V 645 Query: 946 SLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGC 1001 + LS L L++ + E L LP I A + + S +++LR GC Sbjct: 646 GINLSGQSLGQEDLLDFVTEALHYYGLPAHRFCFEITETAAIANLSSAAGFIRELRDMGC 705 Query: 1002 RIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTI 1061 L G L FN LK DYL +DG +V + +D ++ I + LG+KTI Sbjct: 706 AFALDDFGSGLSSFNYLKHMPVDYLKIDGSFVQDVLTDPVDAAMVGAIHRIGRVLGVKTI 765 Query: 1062 AGPVVLPLVMDTLSGIGVDLIYGEVIADAQPL 1093 A V V++ L IGVD G I +P Sbjct: 766 AEFVESEAVLEHLREIGVDYAQGYGIGRPKPF 797 >UniRef50_C7RRQ6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RRQ6_9PROT Length = 1014 Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 197/628 (31%), Positives = 315/628 (50%), Gaps = 49/628 (7%) Query: 497 SRSPFKLEFRITVKDGI-RHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKE 555 R + E R + G+ R + ++N +GEVE+L+G+ D++E K +ALF+ KE Sbjct: 398 KRRRVEREIRFVDRAGVVRWFHTIKAPIVNGDGEVEQLIGVCSDISERKLAEQALFEAKE 457 Query: 556 RLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLM 615 R +TL SIG+AV+ D + + ++NPVAE ++GWT EA G V I + Sbjct: 458 RALVTLHSIGDAVITTDASGHVDYLNPVAEALTGWTTAEARGRSSGEVFPIVHDQTRRPV 517 Query: 616 ENIYSADTSRS---AIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESR 672 + S + A+ +L R G YD+ S P+ D +G VLV ++VTE+R Sbjct: 518 ADPVSRCLQQGRIVALASHSLLVARDGQEYDIDDSAAPIRGRDNQLLGVVLVFRNVTETR 577 Query: 673 KMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAG 732 ++ RQL++ A+HDALT L NR FE++L+ + + RH L ++DLD+FK VND+AG Sbjct: 578 ELARQLAHDATHDALTGLINRPEFERRLQRAVTSARQDGARHVLCYLDLDQFKVVNDTAG 637 Query: 733 HAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYH 792 HAAGD LL+++ +++ M R SD LAR+GGDEF LL +C ++ A IA ++ V ++ Sbjct: 638 HAAGDELLQQINTILAGMFRESDTLARIGGDEFALLQENCPLDRAYAIAQSVVRNVREHR 697 Query: 793 FIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAA-- 850 F W+GR +++G S G+ I +++++ADIACY +K GR RV VY+ + + Sbjct: 698 FNWQGRSYQIGVSIGLVPITAETQDTVQLLTEADIACYTAKELGRNRVHVYQRTDSESVQ 757 Query: 851 -HSE---RAAM--SLDE----------------QWRMIKENQLMMLAHGVASPRIPEARN 888 HSE A + +LD+ +R ++ L+ +AH + R Sbjct: 758 RHSEILGAAGLRDALDQGLFRLHYQPIVALQGPDFRTVRYEALLRVAHPGNTQR------ 811 Query: 889 LWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLP 948 +GE++ F + L A+DR V F++ A V G +++ Sbjct: 812 -----------KGELVLPAAFIPAAERYNLMGAIDRWVIQAAFREYANGVGLGGARLAIN 860 Query: 949 LSVAGLSSATLVNDLLEQLENSPLPP-RLLHLIIPAEAILDHAESV---QKLRLAGCRIV 1004 LS LS +L+ + Q PP R I AI + ++ L+ GC + Sbjct: 861 LSGNSLSDESLLAFIESQFVEHAFPPERACFEITETAAIQNLGPALGLMAALKGHGCHLA 920 Query: 1005 LSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGP 1064 L G L F+ LK DYL +DG ++ + D+ L+ I + +G++T+A Sbjct: 921 LDDFGSGLSSFHYLKTLPVDYLKIDGSFVKDMCEDPRDDALVAAINQMSHAMGIQTVAEY 980 Query: 1065 VVLPLVMDTLSGIGVDLIYGEVIADAQP 1092 V + + L +GVD G P Sbjct: 981 VCSESIAERLCELGVDYAQGYFFGKPMP 1008 >UniRef50_A6SZY4 Uncharacterized conserved protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SZY4_JANMA Length = 934 Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 186/567 (32%), Positives = 297/567 (52%), Gaps = 15/567 (2%) Query: 541 TEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPL 600 TE +Q LF EKER +TL+SI +AV+ D I +MNPVAE ++GW++ EA G+P Sbjct: 362 TEREQSKAILFAEKERAQVTLESIADAVITTDKLGNIEYMNPVAENLTGWSKAEAEGLPS 421 Query: 601 LTVLHITFGDN-GPLMENIYSADTSRSAIE--QDVVLHCRSGGSYDVHYSITPLSTLDGS 657 V I G P+ + +S +E +D VL R+G Y V S P+ DG Sbjct: 422 TRVFKIINGHTREPVPNPVELVFEQQSNVELIKDTVLLSRNGNEYAVEDSAAPIRDRDGK 481 Query: 658 NIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALV 717 IG VLV DV++SRK+ QLS+ A+HD LT L NR FE++L + + T+ ++HAL+ Sbjct: 482 IIGVVLVFHDVSDSRKLAIQLSHQAAHDPLTGLFNRREFERRLEVAIDTLALQSKQHALL 541 Query: 718 FIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESA 777 ++DLD+FK VND+ GH+AGD LLR++ +L+ ++R SD LARLGGDEFG L +C +SA Sbjct: 542 YLDLDQFKIVNDTCGHSAGDELLRQITALLQPLVRDSDTLARLGGDEFGAFLENCTPDSA 601 Query: 778 RFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGR 837 IA ++ + D+HF+W+ ++ +G S G+ + + +++S AD ACY +K+ GR Sbjct: 602 VRIAEKLRQTICDFHFVWQDKIFPIGVSIGLVNFNSDALSLPDLLSAADAACYVAKDTGR 661 Query: 838 GRVTVYEPQQAAAHSERAAMSLDEQ-WRMIKENQLMMLAHGVASPRIPEARNLWLISLKL 896 RV +Y + + + +E+ + + + + + + + R PE+ + L+L Sbjct: 662 NRVHIYRAEDHQLAQNQGEIKWNERIQKAFETDGFCLYSQEIVNIR-PESGSFRFAELRL 720 Query: 897 WSCE--GEIIDEQTFRRSFSDPALSHALDRRVFHEFF-QQAAKAVASKGISIS---LPLS 950 + + G +I F + +DR V F QQAA + S + + +S Sbjct: 721 YMTDDAGRLIPTTAFIPAAERYHYMPTIDRWVIRTVFAQQAAALLKSSDQRLQVMLVKIS 780 Query: 951 VAGLSSATLVNDLLEQLENSPLP-PRLLHLIIPAEAILDHAES---VQKLRLAGCRIVLS 1006 + L T + + EQ + LP + I AI + + + L+ GCR L Sbjct: 781 GSSLDDETFIEFVREQFIHFALPYDSICFAIAETTAITNLTRALSFIDTLKPLGCRFALD 840 Query: 1007 QVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVV 1066 G + F LK D+L +DG ++ + +D I IQ + +G+KTIA V Sbjct: 841 DFGSGMSSFAYLKHLDVDFLKIDGGYIQGMESDPVDCAKIEAIQHISNVMGIKTIAPNVD 900 Query: 1067 LPLVMDTLSGIGVDLIYGEVIADAQPL 1093 +++ L GIG+ + G + P Sbjct: 901 SEAILNKLRGIGIGYVQGSALHPKTPF 927 >UniRef50_A4G4I8 Putative uncharacterized protein n=2 Tax=Herminiimonas arsenicoxydans RepID=A4G4I8_HERAR Length = 937 Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 196/613 (31%), Positives = 315/613 (51%), Gaps = 39/613 (6%) Query: 513 IRHIRAL---ANRVLNKEGEVERLLGINMDMTEVKQLNEA-------------------- 549 +R ++AL AN++ G+++ GI E+ QL A Sbjct: 312 LRRVKALVKTANKI--AAGDLDARTGIKYGKEEISQLARAFDSMVISLQQHESDRELSQA 369 Query: 550 -LFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITF 608 LF EKER +TL+SI +AV+ D I +MNPVAE ++GW+ EA+G+P V I Sbjct: 370 ILFAEKERAQVTLESIADAVITTDKLGNIEYMNPVAEALTGWSNIEAVGLPSTRVFKILN 429 Query: 609 G-DNGPLMENIYSADTSRSAIE--QDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVI 665 G P++ + +S +E +D VL R G Y V S P+ +G IG VLV Sbjct: 430 GYTREPVLNPVELVLQQQSNVELIKDTVLLSRDGIEYAVEDSAAPIRNREGLIIGVVLVF 489 Query: 666 QDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFK 725 DV++SRK+ QLS+ A+HD LT L NR FE++L + + T+ ++HAL+++DLD+FK Sbjct: 490 HDVSDSRKLAIQLSHQAAHDPLTGLFNRREFERRLELAIDTLARQSKQHALLYLDLDQFK 549 Query: 726 AVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRII 785 VND+ GH+AGD LLR++ +L+ ++R SD LARLGGDEFG L +C+ ESA IA ++ Sbjct: 550 IVNDTCGHSAGDELLRQITALLQPLVRDSDTLARLGGDEFGAFLENCSPESAIRIAEKLR 609 Query: 786 SAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEP 845 + D+HF+W+ ++ +G S G+ + N +++S AD ACY +K+ GR RV +Y P Sbjct: 610 QTICDFHFVWQDKIFPIGVSIGLVNFNTNALSLPDLLSAADTACYVAKDAGRNRVHIYRP 669 Query: 846 QQAAAHSERAAMSLDEQWRMIKEN-QLMMLAHGVASPRIPEARNLW-LISLKLWSCEGEI 903 + + +E+ + EN + +LA + + R + L+ ++L + G + Sbjct: 670 EDHQLAVREGEVKWNERIQKAFENDRFHLLAQRIVNIRSDQKDFLFDELTLVMADEFGRL 729 Query: 904 IDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGIS----ISLPLSVAGLSSATL 959 I F + +DR + F Q A + + + + + +S L + Sbjct: 730 IPTSAFLPAAERYHFMPTIDRWIIRTTFAQHAATIRNARDAHPHVMLIRVSSNSLDDESF 789 Query: 960 VNDLLEQLENSPLPPRLLHLIIP-AEAILDHAES---VQKLRLAGCRIVLSQVGRDLQIF 1015 V+ + EQ + LP + + I AI + + + KL+ GC+I L G + F Sbjct: 790 VDFIQEQFVHYALPYQTICFAIAETTAITNLTRALHFIGKLKPLGCQIALYDFGSGMSSF 849 Query: 1016 NSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLS 1075 LK D+L +DG + +L+D I IQ + +G++TIA V + +D L Sbjct: 850 AYLKHLNVDFLKIDGSYVKGMANDLVDCAKIEAIQNISSVMGIETIAQNVEDEITLDKLK 909 Query: 1076 GIGVDLIYGEVIA 1088 IG+ G I+ Sbjct: 910 KIGIGYAQGSAIS 922 >UniRef50_A3ISZ5 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. CCY0110 RepID=A3ISZ5_9CHRO Length = 750 Score = 288 bits (738), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 200/647 (30%), Positives = 335/647 (51%), Gaps = 25/647 (3%) Query: 465 PPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRV 523 P + + W C+ PED + + + ++R+ +G R ++ + Sbjct: 100 PREFLKDRKFWSHCIHPEDILEVCAQLLNLFAEETQI-CQYRLRDHNGNYRWVQDQRKLM 158 Query: 524 LNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPV 583 ++ G ++G D+TE K++ +ALF EKE +TL SIG+ V+ + + ++ ++NPV Sbjct: 159 RDEMGNATEIIGSWQDITERKEIEQALFCEKELAQVTLKSIGDGVITTNFSGEVLYLNPV 218 Query: 584 AEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSA---DTSRSAIEQDVVLHCRSGG 640 AEK++GWT E A G P+ + N +E+ + + D++L R G Sbjct: 219 AEKLTGWTVETAKGKPVTAIFQTINELNEEPIESCVCQLLRQETSICVNDDILLISRDGS 278 Query: 641 SYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQL 700 Y + S +P+ + IG+VLV +DVT+ R++ R++++ A+HD LT L NR SFE+QL Sbjct: 279 RYAIDESASPIYNHNQEMIGTVLVFRDVTKPRQLARKIAWQANHDGLTKLMNRRSFEEQL 338 Query: 701 -RILLQTVNSTHQR-HALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLA 758 R +L+ THQ H L ++DLD+FK VND+ GH AGD LLR+LA L +R+SD +A Sbjct: 339 DRAILEA--RTHQNSHILCYLDLDQFKVVNDTCGHIAGDELLRQLAELFNHQVRTSDKIA 396 Query: 759 RLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQA 818 RLGGDEFG+LL C +++ + IA ++ + D+ F W+ + +GAS G+ I+++ Sbjct: 397 RLGGDEFGILLHQCPLQAGKQIADKLRKLIEDFRFTWDDKTFAIGASIGLVEINEDTLDL 456 Query: 819 AEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQW-----RMIKENQLMM 873 ++S AD ACYA+K+ GR R+ +Y QA H E A + QW ++EN+ + Sbjct: 457 NSLLSAADAACYAAKDNGRNRLHIY---QADDH-EVAKQREERQWISKIHLALEENRFCL 512 Query: 874 LAHGV--ASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFF 931 + +P N + +++ EG+I+ F + L LDR V FF Sbjct: 513 YQQKIIPVNPSKKGQNNHNELLIRMIDREGKIVPPMAFIPAAERYDLMPVLDRWVVSHFF 572 Query: 932 QQAAKAVASKGISI-SLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHL-IIPAEAILDH 989 + + S+ I ++ LS + L+S +N L +QL+ P+ P L I AI + Sbjct: 573 KYYSTLTNSQKQEIYTINLSGSSLTSEQFLNFLKQQLKEHPISPETLCFEITETTAIANL 632 Query: 990 AES---VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLI 1046 +++ +++L+ GC L G + F LK DYL +DG ++ + +D ++ Sbjct: 633 SKAITFIRELKKIGCHFALDDFGSGMSSFGYLKNLPIDYLKIDGSFIKDILKDPIDCEMV 692 Query: 1047 TIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPL 1093 I +G++TIA V ++ L + +D G IA PL Sbjct: 693 ECINRVGHVMGIQTIAEFVESNEILQKLQKMNIDYAQGYGIAKPCPL 739 >UniRef50_B9ZQM9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZQM9_9GAMM Length = 792 Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 182/555 (32%), Positives = 289/555 (52%), Gaps = 13/555 (2%) Query: 550 LFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFG 609 LF EKER +TL +IG+AV+ D+ + ++NPVAE ++GWT +EA+ L V + Sbjct: 221 LFHEKERAQVTLHAIGDAVITTDLRGHVEYLNPVAEHLTGWTHDEAVNHRLDDVFMLIDA 280 Query: 610 DNG-----PLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLV 664 +G PL E +Y D S + D +L R+G Y++ +P+ G+ IG+ LV Sbjct: 281 SSGTRIYHPLTECVY--DGMASGLRHDQMLVSRTGQQYEIEEVASPIRNRSGAIIGAALV 338 Query: 665 IQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRF 724 +DVT SR + R L ++A HD LT L NRA FE++LR ++ H+L+++DLD+F Sbjct: 339 FRDVTRSRSLERDLIWAARHDELTGLPNRAEFERRLRKMVIHARRNGIDHSLIYLDLDQF 398 Query: 725 KAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRI 784 K VND+ GH AGD LLR+LA+ LRSSDVLARLGGDEFG+LL C + A IA +I Sbjct: 399 KVVNDTCGHPAGDELLRQLATQFQERLRSSDVLARLGGDEFGILLERCTLGEAEAIAEKI 458 Query: 785 ISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTV-Y 843 ++V + F W+G+V VG S G+ ID + A + MS+AD ACY +K GR R+ V + Sbjct: 459 RASVAEGRFEWQGKVFTVGVSIGVAPIDPDTGDAEQFMSKADAACYLAKEAGRNRIHVTH 518 Query: 844 EPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEI 903 + A+ E + I+ ++L + + P + + + +++ +GE+ Sbjct: 519 SGDENVAYCEDHMHCVQAISEAIEADRLWLHGQNIC-PVSGKGKGYTEVLVRVLDQKGEL 577 Query: 904 IDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLVNDL 963 + TF + + +DR V A + S+ LS L +++ + Sbjct: 578 LSPGTFIPAAERFGIMPQIDRWVIRRVLTHMANPGSGFKGRYSVNLSGQSLCDIEMLDFI 637 Query: 964 LEQLENSPL-PPRLLHLIIPAEAI--LDHAESVQK-LRLAGCRIVLSQVGRDLQIFNSLK 1019 + ++ + P R+ I AI LD A K LR GCR L G + F L+ Sbjct: 638 TKIFRHTRVDPSRICFEITETAAIANLDQASRFMKELRGLGCRFALDDFGVGMSSFGYLR 697 Query: 1020 ANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGV 1079 DY+ +DG ++ + + ++ I +G++T+A V P ++ +L IG+ Sbjct: 698 DLKVDYIKIDGSFVRDMAEDPIHHAMVESIHHIGHVMGLETVAEFVSDPRLLVSLREIGI 757 Query: 1080 DLIYGEVIADAQPLD 1094 D G + +PL+ Sbjct: 758 DYGQGFGLHRPEPLE 772 >UniRef50_B9YZ47 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YZ47_9NEIS Length = 953 Score = 282 bits (721), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 224/791 (28%), Positives = 366/791 (46%), Gaps = 31/791 (3%) Query: 324 WLQTNKALCQFLGYSQEELRGLTFQQLTWPE--DLNKDLQQVEKLISGEINTYSMEKRYY 381 W + ++ L + +Q +G+ L+ + +L +Q++ + ++ N +S Sbjct: 140 WTEGDRLLGELDQVAQRLRQGMANGTLSPAQAGELKLQIQEINREVTPLENAFS---NVL 196 Query: 382 NRNGDVVWALLA-VSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQL---MERITLANEA 437 G V+ LLA V+LV T L A + ++++E Q L ER+ LA Sbjct: 197 AEGGRVIQRLLAAVNLVA---ATVLILFALLRTRQLIRQSELFEQALGESEERLALAVNG 253 Query: 438 GGIGIWEWELKPNIFSWDKRMFELYEIPPH-IKPNWQVWYECVLPEDRQHAEKVIRDSLQ 496 GIW+W + + R + + H ++ + ++ + P+D + L Sbjct: 254 SDYGIWDWNIAEGSVYYSPRFKAMLGLAEHELEDSIGAFWAHLHPDDTVPTRDSLERHLA 313 Query: 497 SRSPFKLEFRITVKDG-IRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKE 555 + +E+R+ ++G R RA + + G R+ G D+T+ K AL E+E Sbjct: 314 GEGGYDVEYRLRTRNGGYRWFRARGQALRDAAGRAVRMSGSIFDITDRKLAEGALHAEQE 373 Query: 556 RLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGV---PLLTVLHITFGDNG 612 R +TL SIG+AV+ +D ++ ++NPVAE++ G +A G L +L Sbjct: 374 RAQVTLASIGDAVITLDGGGQVDYLNPVAEQLIGHPLAQAHGRRLGALCCLLEEGLSPER 433 Query: 613 PLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESR 672 P+ + + ++++L G V P+ G G VLV D+T R Sbjct: 434 PVRLEPLLNEVAPPGAGRNLLLERHDGSRVSVCMVSAPIFDSQGGVSGKVLVFHDMTRER 493 Query: 673 KMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAG 732 + LS+ ASHDALT L NR FE++L LL+ Q H L+++DLD+FK VND+ G Sbjct: 494 LYIESLSWQASHDALTGLTNRHEFERRLTRLLEATVGRQQYHVLMYLDLDQFKVVNDTCG 553 Query: 733 HAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYH 792 HAAGD LLR++ L+ LR D LARLGGDEFG+LL +C E+A +A ++ V D H Sbjct: 554 HAAGDELLRQVCVLLSQQLREGDTLARLGGDEFGVLLQNCPPEAALPVAEKLRQTVCDLH 613 Query: 793 FIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHS 852 F W G+ + AS G+ I EVM AD+ACY +K GR R +Y AA + Sbjct: 614 FSWNGQPFAISASIGVVHISGVPTTLKEVMRAADVACYMAKEKGRNRAQLY----AADDA 669 Query: 853 ERAAMSLDEQW-----RMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQ 907 E + +W R +++++ + A +A A + + L+L G ++ Sbjct: 670 ELTVRYGEMEWVQRLHRALEDDRFRLYAQTIAPLGEGSAAPHFELLLRLLDEYGMLVPPS 729 Query: 908 TFRRSFSDPALSHALDRRVFHEFFQQ-AAKAVASKGISISLPLSVAGLSSATLVNDLLEQ 966 F + L +DR V AA+ + ++ LS A L + L + Sbjct: 730 AFIPAAERYNLMATIDRWVVSTALAMLAARTSPGSEWTCAINLSGASLCDDDFLGFLRAE 789 Query: 967 LENSPL-PPRLLHLIIPAEAILDHA---ESVQKLRLAGCRIVLSQVGRDLQIFNSLKANM 1022 L S + P L + AI + A E +++LR GCR L G + F LK Sbjct: 790 LAGSGIDPAHLCFEVTETSAIANLACATEFMRELRQLGCRFSLDDFGAGMSSFGYLKHLP 849 Query: 1023 ADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLI 1082 D+L +DG ++ + +D ++ +I +G +TIA P +++ L +GVD Sbjct: 850 VDFLKIDGGFVKDMLDDPVDHAMVEVINHIGHVMGKQTIAEFAEHPGILEALKRMGVDYA 909 Query: 1083 YGEVIADAQPL 1093 G +A PL Sbjct: 910 QGYGVARPLPL 920 >UniRef50_Q98G48 Mll3491 protein n=1 Tax=Mesorhizobium loti RepID=Q98G48_RHILO Length = 544 Score = 282 bits (721), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 194/529 (36%), Positives = 294/529 (55%), Gaps = 21/529 (3%) Query: 334 FLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLA 393 LGYS+EE+ LTF Q+T P+DL+ + +E + + +N + EKRY ++G VWA LA Sbjct: 1 MLGYSREEIEALTFFQITHPDDLHVGRETMEGVKASTVNAFQFEKRYLKKDGTAVWAHLA 60 Query: 394 VSLVRH-TDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIF 452 S++R G PLY ++QIEDI+ K+ E + R A G G+W+ +++ Sbjct: 61 GSVIREEKSGRPLYLVSQIEDIDARKQAEARIAEAETRWNFALAGAGQGVWDLDIRKGGT 120 Query: 453 SWDKRMFE-LYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPF-KLEFRITVK 510 ++ + L + N W + P+DR+ + R L ++ F + EFR+ K Sbjct: 121 TYSSTWVKMLGYADGELDGNPDRWLTMIHPDDRETVAEADRAHLDGKTEFFEAEFRMRHK 180 Query: 511 DGIRHIRAL-ANRVLNKEGEVE--RLLGINMDMTEVKQLNEALF-------QEKERLHIT 560 DG R I L + + ++GE R +G D+T K+ E L EKERL +T Sbjct: 181 DG-RWIWILDRGKAIERDGEGRLVRAIGSLTDITRRKEAEERLTVSAAMLADEKERLRVT 239 Query: 561 LDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYS 620 L SIG+AV+C D A ++TFMNPVAEK++G + E ALG L V + G + Sbjct: 240 LQSIGDAVICTDAANRVTFMNPVAEKLTGVSAEAALGKTLGHVYWAVDEETGHRIGVTRP 299 Query: 621 ADTSRSAIEQD--VVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQL 678 A + + +++ VL R + ++P+ G V+V QD T++R + RQL Sbjct: 300 AIGAETPSDKNSRAVLVRRDDTRCSIRQVVSPIMNERNEFSGLVIVFQDFTDARALQRQL 359 Query: 679 SYSASHDALTHLANRASFEKQLRILLQ-----TVNSTHQRHALVFIDLDRFKAVNDSAGH 733 +++A+HDALT LANR+SF + + L+ + H +FIDLD FK VND+ GH Sbjct: 360 AHAAAHDALTGLANRSSFIRTMEELVDQARKDAAGAGSSGHQFMFIDLDHFKLVNDTGGH 419 Query: 734 AAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHF 793 AAGDALL+ +A + +LR D++ARLGGDEF ++L ++ A A II A+ +F Sbjct: 420 AAGDALLKRVAQAVRGVLRPEDIVARLGGDEFAVILKSGSIAGATIAARSIIDAIAGLNF 479 Query: 794 IWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTV 842 W+GR H +GAS G+ I+ N +A E++++AD ACYA+K GRG V V Sbjct: 480 TWDGRPHAIGASIGVAAINANCGEADEIIARADAACYAAKAAGRGCVCV 528 >UniRef50_B7K4E7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Cyanobacteria RepID=B7K4E7_CYAP8 Length = 715 Score = 282 bits (721), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 189/585 (32%), Positives = 301/585 (51%), Gaps = 25/585 (4%) Query: 531 ERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGW 590 E+ L + ++ E ++ EALF EKE +TL SIG+AV+ D +T++NP+AE ++GW Sbjct: 135 EKNLSLIQEIEEHRRTKEALFCEKELAQVTLKSIGDAVITTDAKGYVTYLNPIAEYLTGW 194 Query: 591 TQEEALGVPLLTVLHITFGDNGPLMEN--IYSADTSRSA-IEQDVVLHCRSGGSYDVHYS 647 ++EA GV L V I ++EN I + D R + ++ +L R G Y + S Sbjct: 195 AEKEAQGVHLFEVFEIVNEFTKEIVENPIIQALDEVRIVNLAKNTILISRDGTEYPIDDS 254 Query: 648 ITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTV 707 P+ +G IG+V+V +DVTE+R + RQLS+ ASHD+LT L NR FE++L L + Sbjct: 255 AAPIQDSNGQVIGAVIVFRDVTEARSLNRQLSWQASHDSLTGLINRLGFEQKLEEALLSA 314 Query: 708 NSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGL 767 +Q H L ++DLD+FK VND+ GHAAGD LLR++ L+ +R+SD LARLGGDEF Sbjct: 315 KKENQHHVLCYLDLDQFKVVNDTCGHAAGDELLRQITHLLQQRVRTSDTLARLGGDEFAF 374 Query: 768 LLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADI 827 LL C++E A IA + + F W + +G S G+ ID N+ V++ AD Sbjct: 375 LLHQCSLEKATEIAETFRELIEKFRFCWNNKTFSIGVSIGVVEIDKNSKDKNSVLALADA 434 Query: 828 ACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQW-----RMIKENQLMMLAHGVASPR 882 ACYA+K GR V VY+ +R + QW + +++N+ + + + +P Sbjct: 435 ACYAAKGKGRNCVQVYQVDNHELLKQRK----ERQWVVQINQALEDNRFRLYSQKI-TPL 489 Query: 883 IPEARNLWL-ISLKLWSCEGEIIDEQTFRRSFSDPALSHALDR-------RVFHEFFQQA 934 + ++ I L+L G+++ F + L A+DR + + ++ Q Sbjct: 490 NSHLKPIYYEILLRLLDDNGQLVSPGNFLPAAERYGLMPAIDRWVISTFLKKYDNYYHQT 549 Query: 935 AKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLII---PAEAILDHA- 990 + ++ LS A ++S + L EQL NS +P + L I A A D A Sbjct: 550 VNKSDFEQNLYAINLSGASINSEQFLEFLKEQLTNSKIPLKNLCFEITETTAIANFDQAI 609 Query: 991 ESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQ 1050 E + +L+ GC + G + F+ LK +YL +DG N+ + +D+ ++ Sbjct: 610 ELINELQQLGCCFAIDDFGHGMNSFDYLKHFPVNYLKIDGSFVRNLVQSEVDQAIVESFN 669 Query: 1051 GHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDL 1095 + +TIA V ++ + IG+D G VIA P + Sbjct: 670 RIGHIMNFQTIAEFVENAAILSKIEAIGLDYAQGYVIAKPVPFEF 714 >UniRef50_B4AXX8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AXX8_9CHRO Length = 619 Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 180/570 (31%), Positives = 294/570 (51%), Gaps = 20/570 (3%) Query: 540 MTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVP 599 +T+ K + ALF EKE TL +GEAV+ D + +IT N AE++ GWT + G+P Sbjct: 45 ITDSKLIEVALFSEKELALATLQCLGEAVITTDTSSQITQCNSAAERLLGWTINQIRGLP 104 Query: 600 LLTVLHITFGDNGPLMENIYSADTSRSAI---EQDVVLHCRSGGSYDVHYSITPLSTLDG 656 +L + G +EN + I E + R Y ++ + +P+ + +G Sbjct: 105 SGEILRLFDEVTGEAVENPIDKVLQQKQIIRLENSLTFVARDEKEYAINLTASPICSGEG 164 Query: 657 SNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHAL 716 +G V++I D +++R++ RQLS+ ASHD LT L NR FE+++ L+ V S + H L Sbjct: 165 QLMGVVVIISDHSQARQLTRQLSWQASHDPLTGLVNRQVFEQRVEKALENVKSQNMTHTL 224 Query: 717 VFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVES 776 ++DLD+FK +NDS GH AGD LLR+++ L+ +RSSD +ARLGGDEFGLLL +C +E Sbjct: 225 GYLDLDKFKMINDSCGHVAGDHLLRQISFLLQQQIRSSDTIARLGGDEFGLLLLNCPIEE 284 Query: 777 ARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGG 836 + IA + A+ D+ FIWE + +GAS G+ ID + ++ AD ACY +K+ G Sbjct: 285 GKKIAETLRQALEDFRFIWEQQRFSIGASIGLVPIDAESADVTTLLDTADTACYVAKSRG 344 Query: 837 RGRVTVYEPQQAAAHSE-RAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLK 895 R R+ + + + + +A + + + ++ N+ + +A N + + L+ Sbjct: 345 RNRIHTFSLDEEELNQQGQARLWVSRLNQALENNKFCLYTQRIAPITSAIGTNHYEVLLR 404 Query: 896 LWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAA--------KAVASKGISISL 947 L +G +I F L +D+ V FF A + + I ++ Sbjct: 405 LVDEQGNMILPGNFLPVAERYHLMPMIDQWVIKNFFNHYAQHNKTSCFQTARQENIVYNI 464 Query: 948 PLSVAGLSSATLVNDLLEQLENSPLPPRLLHL-IIPAEAILDHAES---VQKLRLAGCRI 1003 LS L++ ++ L +QL P+PP+ L I + A+ + +++ + L+ GCR+ Sbjct: 465 NLSAVSLNNQEFLDFLRQQLACPPIPPQSLCFEITESSALANFSQAKLFMDTLKQLGCRL 524 Query: 1004 VLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAG 1063 L VG + LK DYL ++ L + E I GHA LGM+TIA Sbjct: 525 ALDNVGTGINSLTYLKNLSVDYLKINMSLITDAVDYTFVECFNRI--GHA--LGMQTIAE 580 Query: 1064 PVVLPLVMDTLSGIGVDLIYGEVIADAQPL 1093 V P +++ L +G+D + G IA+ PL Sbjct: 581 FVEHPGILEPLKSMGIDYVQGYSIAEPVPL 610 >UniRef50_B8GSV3 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain n=2 Tax=Thioalkalivibrio RepID=B8GSV3_THISH Length = 806 Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 185/544 (34%), Positives = 280/544 (51%), Gaps = 11/544 (2%) Query: 550 LFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITF- 608 L++EKER +TL +IG+AV+ D + ++NPVAE ++GW A G L V TF Sbjct: 234 LYREKERAQVTLHAIGDAVITTDTQGLVDYLNPVAEHLTGWRNHLARGRSLAEVFR-TFH 292 Query: 609 -GDNGPLMENIYSA--DTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVI 665 G P+ + A D + S++ Q VVL R G + V P+ DG IG+ LV Sbjct: 293 EGSGDPVPHPLIHAVPDATASSLHQGVVLVSRDGREFAVEEVSAPIRDRDGHVIGAALVF 352 Query: 666 QDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFK 725 +DVT++R+M R+LS++A+HD+LT L NRA FE++L +L+ T + HA++F+DLD+FK Sbjct: 353 RDVTQAREMARKLSWAATHDSLTGLVNRAEFERRLDLLVTTARQEGRGHAVLFMDLDQFK 412 Query: 726 AVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRII 785 VND+ GHAAGD LLR+L + LR +D LARLGGDEFG+LL C +E A IA + Sbjct: 413 LVNDTCGHAAGDELLRQLTRRLQGQLRDNDTLARLGGDEFGVLLEGCPMERAGQIAETLR 472 Query: 786 SAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEP 845 + V ++ F W+ +++ VG G+ ID++ A +MS AD ACY +K GR R+ + + Sbjct: 473 ATVAEFRFQWQEKIYTVGVCIGVAPIDEHIKSVASLMSDADAACYLAKEQGRNRIHIIQH 532 Query: 846 QQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIID 905 A + MS ++ E L H P + +++ +G II Sbjct: 533 GDQALSRRQGEMSWVQRINEALERDRFCLYHQHIVPVSGNEPPHTEVLVRMLDEDGAIIA 592 Query: 906 EQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLVNDLLE 965 F + L A+DR V ++ LS L +++ +L+ Sbjct: 593 PMAFIPAAERYGLMPAIDRWVIARVLNHLRIPGPRPHGLYAINLSGQSLCDNQMLDFILD 652 Query: 966 QLENSPLPP-RLLHLIIPAEAI--LDHAES-VQKLRLAGCRIVLSQVGRDLQIFNSLKAN 1021 L + + P R+ I AI L AE + LR GCR L G + F LK Sbjct: 653 MLARTGVEPGRVCFEITETTAIANLTQAERFMSALRNLGCRFALDDFGTGMSSFGYLKQL 712 Query: 1022 MADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDL 1081 D+L +DG ++ + ++ ++ I +G++TIA V VMD L IGV+ Sbjct: 713 KVDFLKIDGSFVRDMNEDPINRAMVESINHIGHIMGIQTIAECVAHEAVMDHLKAIGVN- 771 Query: 1082 IYGE 1085 YG+ Sbjct: 772 -YGQ 774 >UniRef50_Q474K3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=cellular organisms RepID=Q474K3_RALEJ Length = 968 Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 215/685 (31%), Positives = 333/685 (48%), Gaps = 29/685 (4%) Query: 429 ERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVL-PEDRQHA 487 ER+ LA G+W+W+++ + R ++ P P+ + +L P D Sbjct: 270 ERLQLAVGGSNDGLWDWDVRSGKLYFSPRCAQMLGFEPDALPHARETLLGLLHPADLNGF 329 Query: 488 EKVIRDSLQSRSPFKLEFRI-TVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQL 546 + + L+ P+ FR+ T DG +RA V +G V R+ G D++E K+ Sbjct: 330 DDKLWRHLRRGDPYDANFRLRTSGDGYLWVRARGRLVRGDDGRVMRMAGSLTDISEHKRY 389 Query: 547 NEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHI 606 LF EKER +TL +IG+AVV D+ +I +NP AE ++GW +EEA G L V + Sbjct: 390 EFQLFAEKERAQVTLQAIGDAVVTTDVWGRIESLNPAAEALTGWREEEARGRLLQQVCAL 449 Query: 607 T-FGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVI 665 G PL N+ + + +L R G + V S+ + IG V+V+ Sbjct: 450 CDEGSEAPL-RNLVALALQQRWPGMTALLTGRGGRAVAVKPSVALIRDRSAQAIGVVVVL 508 Query: 666 QDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFK 725 D+ R+ +L++ ASHDALT L NR FE++L + V T HAL+++DLD+FK Sbjct: 509 HDIRHEREHAARLAHEASHDALTGLVNRTEFERRLAAAIARVRVTSGTHALMYLDLDQFK 568 Query: 726 AVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRII 785 VND+ GHAAGD L+R++A++M + LR D LARLGGDEFG+LL C A IA + Sbjct: 569 VVNDTCGHAAGDELIRQMAAVMRAQLRKGDTLARLGGDEFGILLEHCPAPDAERIAESLR 628 Query: 786 SAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEP 845 AV + F R VG S G+ +D + AE MS AD ACY +K GR RV VY P Sbjct: 629 RAVAGFRFTHRQRTFAVGVSIGLVALDGDTGGVAEAMSAADAACYVAKENGRNRVQVYHP 688 Query: 846 QQA---AAHSE-----RAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW 897 Q A H E R +L + E +++ L + + +++ L+ L++ Sbjct: 689 QDTVVQARHGEMEWVSRVHAALAAGRFCLYEQEIVPL-----NGQRQGGKHVELL-LRMV 742 Query: 898 SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLP---LSVAGL 954 +++ F + L +DR V F A+ A I+L LS + L Sbjct: 743 DERNQLVPPMAFVPACERYNLMPMIDRWVVETAFVTLAQRRAESAEDIALCAINLSASSL 802 Query: 955 SSATLVNDLLEQLENSPLP-PRLLHLIIPAEAILDHAES---VQKLRLAGCRIVLSQVGR 1010 + + EQ + + + + I AI + A++ +++++ GC L G Sbjct: 803 ADVRFPTFIREQAQRTGVALSGICFEITETAAISNLAQAAAFIEQMQALGCVFALDDFGA 862 Query: 1011 DLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQ--GHAQRLGMKTIAGPVVLP 1068 + F LK A YL +DG + + ++++++ +IQ GHA +G KTIA V Sbjct: 863 GMASFIYLKHLPAAYLKIDGSFVREMLEDPVNQVMVEVIQRIGHA--MGKKTIAEHVETE 920 Query: 1069 LVMDTLSGIGVDLIYGEVIADAQPL 1093 + L +GVDL+ G IA P Sbjct: 921 AELARLRELGVDLVQGHHIAPPVPF 945 >UniRef50_C6MI98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MI98_9PROT Length = 798 Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 189/594 (31%), Positives = 302/594 (50%), Gaps = 29/594 (4%) Query: 519 LANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKIT 578 L R++ + ++E+ + + + N+ L QEKE ITL SI +AV+ D KIT Sbjct: 204 LLKRLIQTKNQLEQRVAERTEALTIT--NDILHQEKELFQITLASISDAVITTDANGKIT 261 Query: 579 FMNPVAEKMSGWTQEEALGVPLLTVLHI-TFGDNGPLMENI--YSADTSRSAIEQDVVLH 635 F+NP AE +GW+ EE PL V +I + P+ + + + + S + +L Sbjct: 262 FLNPTAEIFTGWSNEEMHDTPLQEVFNIMDIATHKPVPDPLADHLNELENSPKYSECILI 321 Query: 636 CRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRAS 695 R Y + Y++ P+ IG+V+ +DVTE RK+ +L+Y A+HD+LT L NR Sbjct: 322 HREKKEYIIDYAVAPIQNEQKHRIGAVITFRDVTEQRKLTLKLAYQAAHDSLTGLLNRKE 381 Query: 696 FEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSD 755 FE +L +L ++ + HAL+++DLD+FK +NDS GH+AGD LLR++ +L+ S LR+ D Sbjct: 382 FENRLSKILTSMRK-NDMHALLYLDLDQFKIINDSCGHSAGDKLLRQVTALLHSKLRARD 440 Query: 756 VLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNN 815 LARLGGDEFG++L C + A +A + V ++ F W G+ +G S G+ I N Sbjct: 441 TLARLGGDEFGVILEHCPKDQALQVADTLRELVQNFRFQWRGKTFTIGVSIGLFPITHGN 500 Query: 816 HQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKEN------ 869 ++ AD ACYA+K GR RV +Y Q+ H + + +QW +N Sbjct: 501 QGLEHALNAADSACYAAKEQGRNRVQIY---QSVPHLQGSVEM--QQWLPRIQNALTEQR 555 Query: 870 -QLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFH 928 QL + SP+ E I L+L G++I F + +DR V Sbjct: 556 FQLYYQPIQLISPKHAEQEQHGEILLRLQDENGQLIMPGAFLPAAGRHDQILPIDRWVVQ 615 Query: 929 EFFQQAAKAVASKGISISLPLSVAG--LSSATLVNDLLEQLENSPLPPRLLHLIIPAEAI 986 + Q KA A+ I+ ++++G L + ++ + ++ S L P + I + Sbjct: 616 QSL-QLIKAHATHTINAIYTINISGQALVNEDFLDFTVNSIKASQLDPACICFEISEQTA 674 Query: 987 LDHAESVQK----LRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMD 1042 L+ + V + L+ GCRI + +L F+ LK DYL +DG L N+ + ++ Sbjct: 675 LNDLQHVIRFVTTLKELGCRISIDDFSSNLSSFSYLKDIPLDYLKIDGRLIKNMLTDPVN 734 Query: 1043 EMLITIIQ--GHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLD 1094 + ++ I GH RL KTIA V + L IGVD + G +A+ PL+ Sbjct: 735 QAMVESIHHIGHIMRL--KTIAVWVENDQTLQILENIGVDYVQGFWVAEPTPLN 786 >UniRef50_B4WLF6 PAS fold family n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WLF6_9SYNE Length = 615 Score = 262 bits (670), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 154/440 (35%), Positives = 241/440 (54%), Gaps = 18/440 (4%) Query: 417 LKRTEQVNQQL---MERITLANEAGGIGIWEWELKPNIFSWDKR---MFELYEIPPHIKP 470 +KR E ++QQL +R LA + GIW+W+L+ + +R + L E + P Sbjct: 141 IKRAE-LSQQLEISQQRYELAVKGTNDGIWDWDLQNQRIYYSERWQSLLGLSESDMNDSP 199 Query: 471 NWQVWYECVLPEDRQHAEKVIRDSLQSR-SPFKLEFRITVKDGI-RHIRALANRVLNKEG 528 ++ W+ + P DR ++ + L F+ E R+ DG R + + + + +G Sbjct: 200 HF--WFSRIHPNDRSRFQQQLTGYLDKELQHFECEHRMLHSDGTYRWMLSRGVALWSDQG 257 Query: 529 EVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMS 588 R+ G D+T K L +L+QEKE ITL SIG+AV+ D I +NP+AE+++ Sbjct: 258 RAYRIAGSQTDITSRKSLENSLYQEKELAQITLHSIGDAVITTDSKGYIQDLNPIAERLT 317 Query: 589 GWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHC-----RSGGSYD 643 GW + EA + V ++ DN + T V+ HC + G + Sbjct: 318 GWKRHEAQQKSIAEVYNLV--DNSTQRLKDPAVQTIAEGTATGVINHCPILISKHGRKFA 375 Query: 644 VHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRIL 703 + S P+ + G +G+V++ DVTE R ++L++ SHD LTHL NR+ F++ L + Sbjct: 376 IRESTAPIRSASGETVGTVVIFHDVTEERMKAKRLAWQVSHDPLTHLYNRSKFQQSLNEI 435 Query: 704 LQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGD 763 ++ ++ +H L +DLD FK+VND+ GHAAGD L+++A L S +RSSD+LARLGGD Sbjct: 436 IEDAHTHKSQHVLCCMDLDNFKSVNDTCGHAAGDLFLQQIAHLWRSKIRSSDLLARLGGD 495 Query: 764 EFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMS 823 EFGL+L DCN+ SA I + ++ + F++E +V VG S G+ I + A EV+ Sbjct: 496 EFGLILYDCNLASALKITNALCESLRSFRFVYEHKVFNVGVSIGVAPITRDTRGAEEVLR 555 Query: 824 QADIACYASKNGGRGRVTVY 843 AD ACY +KN GR RV V+ Sbjct: 556 LADGACYEAKNKGRNRVQVH 575 >UniRef50_B9ZMB9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZMB9_9GAMM Length = 817 Score = 262 bits (669), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 232/834 (27%), Positives = 373/834 (44%), Gaps = 83/834 (9%) Query: 302 THFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRG----LTFQQLTWPEDLN 357 T F+ E + ++ G + N+A + LGY+Q+EL G T D++ Sbjct: 8 TRFQRLFEQAPEAQLVLNRAGHVVAANQAASRLLGYAQDELTGGIHITTIDLEATQADVD 67 Query: 358 KDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINEL 417 + Q ++ + T RY R+G A + ++ + HT G + +A + DI Sbjct: 68 RAHGQPDERLPARFET-----RYRRRDGAEFPAEININAI-HT-GEDIEVLATVRDITRQ 120 Query: 418 KRTEQVNQQLMERITLANE-----------------AGGIGIWEWELKPN-IFSWDKRMF 459 +++EQ +L +++ + G + L+P + D R+ Sbjct: 121 QQSEQALHELETQLSATIRHAPLLLFGLGPDGVFTLSEGAALHSLGLQPGEVVGQDARL- 179 Query: 460 ELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRAL 519 LY P I + L ++ +E + DS + S +E + + G+ Sbjct: 180 -LYADHPAILS----AIDRALEGEQFQSEVKVGDSHFAISWMPMEVAQSFQPGV------ 228 Query: 520 ANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITF 579 LG+ D+T ++ + E++RL TL SI + V+ D ++T+ Sbjct: 229 --------------LGVAWDITSLRAAEASTASERDRLLTTLHSISDGVLTADTTGRLTY 274 Query: 580 MNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSA--DTSRSAIEQDVVLHCR 637 +NP A + G G L +L + G + N + +T + + VL Sbjct: 275 LNPSARDLLGVDATAVQGQRLDELLELEDTHTGHRVMNPVTQCLETGMTLESPERVLRRP 334 Query: 638 SGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFE 697 G + V ++PL D + G V+V+ D TE +M +QL++ A+HD LT L NR FE Sbjct: 335 DGAARVVRLLVSPLRRPDHHSEGVVVVLHDHTELWRMTQQLNHQATHDELTGLCNRREFE 394 Query: 698 KQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVL 757 ++L L+T+ HAL ++DLD+FK +ND+ GH AGDALLRELA L+ + +R SD L Sbjct: 395 RRLDEALRTLEEGDTPHALFYMDLDQFKIINDTCGHQAGDALLRELADLLPAHIRDSDTL 454 Query: 758 ARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQ 817 ARLGGDEFGLLL C VE A I ++++ F WEGR VG S G+ I+ Sbjct: 455 ARLGGDEFGLLLRHCPVERAEAIGNKLLATAQGLRFSWEGRRFDVGMSIGLVPIEGPGQN 514 Query: 818 AAEVMSQADIACYASKNGGRGRVTVYEPQQA---AAHSE-------RAAMSLDEQWRMIK 867 EV+SQAD ACY +K+ GR R+ ++P H E RAA+ E+ R + Sbjct: 515 LPEVLSQADSACYVAKDLGRNRLYTWKPSDQILRRRHGEMEWVGRLRAAL---EEARFVA 571 Query: 868 ENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVF 927 Q + +G P + I L+L +G +I F + L +DR V Sbjct: 572 YAQPVKPLNGADLP-----LDHVEILLRLHGEDGTLITPGAFIPAAERYHLMPEIDRHVV 626 Query: 928 HEFFQQAA----KAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPA 983 F+Q A + + +S+ LS L+ ++ + ++ + + + + Sbjct: 627 ELVFRQLADHRDRNPHHAPVVVSINLSGQSLAQDGMLEFITSRMSQFRIQAQQIIFEVTE 686 Query: 984 EAILDHAESVQ----KLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGN 1039 A + H + Q LR GCR L G L F LK D+L +DG ++ N Sbjct: 687 TAAISHHDRAQGLIRALRYMGCRFSLDDFGSGLSSFGYLKNLPVDFLKVDGSFVRDIATN 746 Query: 1040 LMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPL 1093 +D ++T I LG++TIA V M L IG+D + G +A PL Sbjct: 747 AVDAAMVTAIHRVGHVLGLRTIAECVESEETMHHLREIGLDFVQGYHLAKPIPL 800 >UniRef50_Q12L20 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Shewanella RepID=Q12L20_SHEDO Length = 1047 Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 227/891 (25%), Positives = 418/891 (46%), Gaps = 50/891 (5%) Query: 228 VRLPRMEAFLIFLTTVMMVSLMMAADP--SLLATPRTYLMSHMPWLPFLLILLPANIMTM 285 ++L ++ F + + V + + M+ AD ++ YL+ P L++L AN+M+ Sbjct: 159 IKLAKLYLFGLVVQIVFLSTSMLTADNWRHVIHLNSLYLLVFFP----LIMLAAANLMSK 214 Query: 286 VMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGL 345 ++ R + + E + F+N + IG+A+ WL+ N +C+ L YS++EL + Sbjct: 215 YIFFERNMQIRLQE-DFLFKNQFDIGNIGIAITSKAKYWLKVNPCICKMLKYSEKELTRM 273 Query: 346 TFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPL 405 T+++LT PEDL KDL +++ GEI+ Y ++KR+ ++G +V+ L V+ R D + Sbjct: 274 TWKELTHPEDLEKDLSYFNRMLKGEISEYEIDKRFIAKDGAIVYTHLTVA-CRFYDNGSM 332 Query: 406 YFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIP 465 IA DI +LK+ E Q E++ L ++ +GIW+W + N + + R ++ Sbjct: 333 LVIAGFLDITKLKQAEAALQNSKEQLALVLDSSDLGIWDWHINTNEVASNLRSAQIIGCE 392 Query: 466 PHI---KPNWQVWYECVLPEDRQHAEKVIRDSLQSRS-PFKLEFRITVKDG-IRHIRALA 520 + KP+ +W++ ++ EDR+ K + + +S K+E+RI +G IR I Sbjct: 393 LALLNQKPS--LWFKAIIAEDRKRLIKSLLAIRKGQSIHHKIEYRIRSLNGDIRWILDTG 450 Query: 521 NRV-LNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITF 579 V + G+ R+ G + D+T++K+ E+L + EA+ D KI Sbjct: 451 KVVEVADTGQPLRMCGTHTDITDLKRAEESLSIAAS----VYRNSSEAMCVFDYQGKIVN 506 Query: 580 MNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSG 639 NP +++G+ +E +G L + ++ L Y + + + ++ ++G Sbjct: 507 TNPAFSEITGFDADEVIGQHLAVLQKEEQAEHFNLQLEQYLFE--KRYWQGELSFQRKNG 564 Query: 640 GSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQ 699 +Y +I + LD + +V++ DV+E ++ + A++D LT L NR + Sbjct: 565 QTYTAWVTINAIGELDTCDTLNVMLFADVSEKKQAEELIWLQANYDTLTGLPNRRMLLEY 624 Query: 700 LRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLAR 759 +++ + +Q AL+F+DLD FK VNDS GH GD+LL E + + + +R +D++AR Sbjct: 625 IKLQIANCTRDNQGFALLFLDLDFFKEVNDSLGHDMGDSLLVEASQRIKACIRDADLVAR 684 Query: 760 LGGDEFGLLLPD-CNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQA 818 +GGDEF ++L D + + +I+ +++ F+ + + S GITL D+ Sbjct: 685 IGGDEFTIVLTDFTGPKGVERVTNKILKQLSE-PFMLGSEMAYISGSIGITLYPDDALTI 743 Query: 819 AEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKEN-----QLMM 873 ++ AD A Y++K GR + + P+ R + D + + E Q ++ Sbjct: 744 DGLLKNADQAMYSAKAHGRNKFNYFTPKMQETALRRMKLIQDLKTAIKMEEFELYYQPII 803 Query: 874 LAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQ 933 AS I +A L ++ + I F D + + VF + +Q Sbjct: 804 DFSANASDNITKAEAL----IRWHHPKLGFISPVDFIPIAEDTGMIVEIGNWVFRQACRQ 859 Query: 934 AAKAVASKGISISLPLSVAGL------SSATLVNDLLEQLENSPLPPRLLHLIIPAEAIL 987 AA+ + G+ I + ++ + + SS T + +L SP + E +L Sbjct: 860 AAQWKQTYGLDIQISINKSPVQFRDERSSVTSWTQYMSELNLSPASI----CVEITEGLL 915 Query: 988 DHAES-----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMD 1042 ES + R AG +I L G + LK DYL +D +N++ N D Sbjct: 916 LETESGVGAKLAAFRDAGMQISLDDFGTGYSSLSYLKKFDIDYLKIDKSFVSNLEDNTND 975 Query: 1043 EMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPL 1093 L I + +LG+K IA + L L G D YG+ ++P+ Sbjct: 976 LSLCEAIIVMSHKLGIKVIAEGIETELQRAMLECAGCD--YGQGYLFSKPV 1024 >UniRef50_Q88M14 Sensory box protein/GGDEF family protein n=23 Tax=Proteobacteria RepID=Q88M14_PSEPK Length = 973 Score = 259 bits (661), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 180/566 (31%), Positives = 281/566 (49%), Gaps = 17/566 (3%) Query: 540 MTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVP 599 + + + AL +EKER ITL +IG+AV+ D+ I +MNP AE+++ W +A G+P Sbjct: 385 LAQRQAFASALQEEKERAQITLQAIGDAVITTDVEGNIGYMNPAAEQLTHWQSGQAQGLP 444 Query: 600 LLTVLHI----TFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLD 655 L + + D L+E + S + + E ++ G + ++ +P+ D Sbjct: 445 LSALFSLVDEHAEEDGRSLVEQVLSG-SLKGGSEHARLIQRLDGSTVSINLVGSPILN-D 502 Query: 656 GSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHA 715 G G VLV+ D+T+ R+ + LS+ A+HDALT LANR FE +L L + RH+ Sbjct: 503 GQVSGIVLVLHDMTQERQYIANLSWQATHDALTGLANRREFEYRLEQALNDLARQAGRHS 562 Query: 716 LVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE 775 L+F+DLD+FK VND+ GHAAGD LLR + +++ S LR D LARLGGDEFG+LL +C + Sbjct: 563 LMFLDLDQFKLVNDTCGHAAGDELLRHICAVLQSGLREGDTLARLGGDEFGVLLENCPPD 622 Query: 776 SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNG 835 A I ++ V HF+W+GR S G+ + + AD+ACY +K Sbjct: 623 QAERIGEQLRQMVQSLHFVWKGRPFVTTVSIGLVHMAQAPGTLEASLRAADMACYMAKEK 682 Query: 836 GRGRVTVYEPQQAAAHSERAAMSLDEQWRM-IKENQLMMLAHGVASPRIPEARNLWLISL 894 GR RV VY + M+ ++ + ++EN+ + A +A + E I L Sbjct: 683 GRNRVQVYHADDSELSMRFGEMAWIQRLHVALEENRFCLYAQEIAPLKTFEGPGHIEILL 742 Query: 895 KLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAGL 954 +L G I +F + L ALDR V F K + +G L L Sbjct: 743 RLHDESGRTILPSSFIPAAERYGLMTALDRWVVRNVFMVIRKCL-EEGREGPLSTCAINL 801 Query: 955 SSATLVND-LLEQLE----NSPLPPRLLHL-IIPAEAILDHAESVQ---KLRLAGCRIVL 1005 S +++ +D LE L+ +PPR++ I AI + +++ +L+ GCR L Sbjct: 802 SGSSIGDDKFLEYLQRLFVEYAIPPRMICFEITETSAIANLGSAIRFINELKGLGCRFSL 861 Query: 1006 SQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPV 1065 + F LK DYL +DG ++ + ++ ++ +I +G +TIA V Sbjct: 862 DDFCAGMSSFAYLKHLPVDYLKIDGSFVKDMLDDPVNRAMVEVINHIGHVMGKRTIAEFV 921 Query: 1066 VLPLVMDTLSGIGVDLIYGEVIADAQ 1091 PL+ L IGVD G +I Q Sbjct: 922 ETPLIEQALQEIGVDYAQGYLIERPQ 947 >UniRef50_B0C150 Signal transduction protein containing an EAL domain, a PAS domain, a CBS domain pair and a GGDEF domain n=2 Tax=Bacteria RepID=B0C150_ACAM1 Length = 1405 Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 220/822 (26%), Positives = 383/822 (46%), Gaps = 52/822 (6%) Query: 297 ISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDL 356 + ESE F+ + + + + + G + Q N+ +F G + G + + PED Sbjct: 598 LRESEQRFQQMADCAPVLLWMSGVDKQCTFFNQQWLEFTGQTMAHELGKGWAEGIHPEDR 657 Query: 357 NKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRH-TDGTPLYFIAQIEDIN 415 L + + ME R +G W L+ + R +G + +I DI Sbjct: 658 QTSLDICKTAFDAR-EPFCMEYRLRRHDGAYRW-LIDMGTPRFLPNGEFIGYIGSCVDIT 715 Query: 416 ELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHI-KPNW-- 472 + K +E ++EA ++ + +F +D ++ IPP I P+ Sbjct: 716 DRK--------TLEDKVRSSEAQIRAVFNG-MTDIVFVFDTETQQINAIPPSIVSPDMVE 766 Query: 473 --QVWYECVLPEDRQHA--EKVIRDSLQSRSPFKLEFRITVKD----GIRHIRALANRVL 524 E +L E+ Q + I+ ++ S+ E+++ + I L+ Sbjct: 767 TINQTAEVLLLENEQAQAFHEHIQQAINSQETVTFEYQLPSTSIPAWYVASITPLSPT-- 824 Query: 525 NKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVA 584 + + ++T+ K + + LFQEKE +TL SIG+AV+ D +I +N VA Sbjct: 825 -------SAIWVAHNITDRKYMEQELFQEKELAQVTLQSIGDAVITTDAQGQIRHLNAVA 877 Query: 585 EKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSAD----TSRSAI-EQDVVLHCRSG 639 E+++GW+ EA G P+ V + D +I D T AI E +L + G Sbjct: 878 EQLTGWSCFEAQGHPIHEVFQVV--DETTRRPDIQLIDSVLMTGEIAISEHQALLIAQDG 935 Query: 640 GSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQ 699 Y + +S P+ + + +G V+V +DV++SR++ +Q+++ ASHD+LT L NR FE+ Sbjct: 936 QEYAIDHSAAPIRDRNTTILGIVVVFRDVSQSRQLSQQMTWHASHDSLTGLVNRYQFEQL 995 Query: 700 LRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLAR 759 L+ LQ+ + +H L ++DLD+FK VND+ GHAAGD LL+++A L +RS+D++AR Sbjct: 996 LQKALQSAHRDQLQHVLCYLDLDQFKIVNDTCGHAAGDELLQQVAELFKHTIRSTDIIAR 1055 Query: 760 LGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAA 819 LGGDEFGLLL C++E A+ IA ++ + + F W + +G S G+ I+ ++H + Sbjct: 1056 LGGDEFGLLLHQCSIERAQVIAEQLRQRLQTFRFNWNQQAFSIGLSIGLVAINYDSHNLS 1115 Query: 820 EVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRM-IKENQLMMLAHGV 878 ++S AD ACYA+K GR R+ VY+ +R + + ++EN+ + + Sbjct: 1116 SLISAADAACYAAKARGRNRIHVYQLDDLELVQQRGTQRWSRRIKQALEENRFRLYGQAI 1175 Query: 879 --ASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFF----- 931 A P E + L++ + +++ TF + L +DR V +F Sbjct: 1176 VPADPEQSEIHQCCEVLLRMVDEQDQVVSAATFIPAAERYNLMPEIDRWVISQFLVDHFN 1235 Query: 932 -QQAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSP-LPPRLLHLIIPAEAILDH 989 Q K + + LS A + + L EQ + P P++ I AI + Sbjct: 1236 PPQMPKTGGDQPFPYMINLSGASIGDEQFLQFLQEQFQRYPHAAPQICFEITETAAISNL 1295 Query: 990 AES---VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLI 1046 ++ + +L+ GC+ L G L F LK DYL +DG ++ + + ++ Sbjct: 1296 NQAITFINELKQLGCKFALDDFGSGLSSFAYLKTLPVDYLKIDGHFIEDMANDPATQAIV 1355 Query: 1047 TIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIA 1088 I +G++TIA V L +G+D + G IA Sbjct: 1356 ESINHIGHVMGLQTIAESVGDLSTRKQLQSMGIDYVQGYGIA 1397 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 6/138 (4%) Query: 301 ETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDL 360 + FR E + IG+A V +GQ + N+ C L + ++ + + + Sbjct: 334 QERFRVMFEQAVIGIAHVDLQGQVMLANQRFCDLLQRTPAQVTHTPMNDVLQMPQVGGNW 393 Query: 361 QQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRT 420 Q E L + ++ +E Y + G W L +SL + G P YFI ++DI++ K+ Sbjct: 394 Q--ETLHAQTQDSIQIEHHYRHPQGHSAWLDLTISLATTSTGAPDYFIVMVQDISDRKQA 451 Query: 421 E----QVNQQLMERITLA 434 E ++N++L R++L Sbjct: 452 ELERQKLNRELETRVSLG 469 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 54/291 (18%), Positives = 117/291 (40%), Gaps = 11/291 (3%) Query: 283 MTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEEL 342 +++ + AFRA SE FR + + +V +G + N+A Q GY EL Sbjct: 466 VSLGISAFRA-------SEKRFRMLFNAAPDALFVVDFQGVIRRVNQAAIQQSGYKASEL 518 Query: 343 RGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDG 402 G + V +L+ + +Y + ++NG + + ++V Sbjct: 519 LGSVLKTYLSEASQAACETYVAQLV--DQGSYHQTLEFIHKNGTPLVIDCSCNVVTDPAS 576 Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELY 462 Y + DI++ + + ++ +R + + +W + ++++ E + Sbjct: 577 QEPYILMVQRDISDQVQADTALRESEQRFQQMADCAPVLLWMSGVDKQCTFFNQQWLE-F 635 Query: 463 EIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALAN 521 + W E + PEDRQ + + + + +R PF +E+R+ DG R + + Sbjct: 636 TGQTMAHELGKGWAEGIHPEDRQTSLDICKTAFDAREPFCMEYRLRRHDGAYRWLIDMGT 695 Query: 522 RVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCID 572 GE +G +D+T+ K L + + + ++ + + + V D Sbjct: 696 PRFLPNGEFIGYIGSCVDITDRKTLEDKVRSSEAQIRAVFNGMTDIVFVFD 746 >UniRef50_A3JCF9 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=A3JCF9_9ALTE Length = 1133 Score = 256 bits (654), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 178/578 (30%), Positives = 280/578 (48%), Gaps = 30/578 (5%) Query: 539 DMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGV 598 D++E K++ E L + E +TL++I E V+ D M ++NP+A ++GW+ ++A G Sbjct: 564 DISERKRIEEQLHRHSELAQVTLEAITEGVITFDAQMHTVYLNPIAAALTGWSSQQAFGK 623 Query: 599 PLLTVLHITF--GDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSY-DVHYSITPLSTLD 655 P +L + GDN ++ + + GG + D+ + PL Sbjct: 624 PAEHILCLKSIEGDNMAVLPLFQQQKKQCLQL-------IKKGGKFSDIELTPAPLHNHA 676 Query: 656 GSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHA 715 G +G V+V+QDVT S+ + +QLS+ A HD LT L NR FE+ L+ L+Q V H Sbjct: 677 GEPVGWVVVMQDVTNSKLLQQQLSFQAIHDPLTGLINRREFERSLQSLIQDVEHNASEHL 736 Query: 716 LVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE 775 L ++DLD+FK VND+ GH AGD LL++LA+ + +LR SD+LARLGGDEFG+LL C + Sbjct: 737 LCYLDLDQFKIVNDTCGHQAGDELLKQLANTLKPLLRQSDILARLGGDEFGVLLSHCPLN 796 Query: 776 SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNG 835 + IA ++ AV +HF W+G+V VG S GI + ++S+AD ACY +KN Sbjct: 797 QGQEIAEQLREAVCGFHFSWDGQVFAVGVSIGIVHLTQPCGDLGIMLSKADTACYLAKNL 856 Query: 836 GRGRVTVYEPQQAAAHSE--------RAAMSLDEQWRMIKENQLMMLAHGVASPRIPEAR 887 GR RV ++ P + + R +L+E + +M L A P E Sbjct: 857 GRNRVHLHLPDSSEVKLQTDQVQWVNRIRQALNEDHFRLFCQPIMALDQADADPTHYE-- 914 Query: 888 NLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISI-- 945 I L+L G ++ F S L +D V + + + Sbjct: 915 ----ILLRLKDARGHMVPPGAFLPSAERFNLMPQIDLWVIRNTLAWMGGQLRGSHLDLHC 970 Query: 946 SLPLSVAGLSSATLVNDLLEQLENSPLPP-RLLHLIIPAEAILDHAES---VQKLRLAGC 1001 ++ LS A + + + EQL +P R+ I A+ D ++ + +LR GC Sbjct: 971 AINLSGASIGHPECLQTIREQLTKHRVPAHRVCFEITETTAMADLKKAQDFIGELRTLGC 1030 Query: 1002 RIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTI 1061 + L G L F L+ DYL +DG + + +D ++ I +G+KT+ Sbjct: 1031 KFALDDFGSGLSSFGYLRHLSVDYLKIDGIFIRELAQSPIDRAIVDSINTIGHIMGLKTV 1090 Query: 1062 AGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNS 1099 A V + L +GVD G + QPL+ L N+ Sbjct: 1091 AEFVEDGATHEILHQLGVDYAQGYHLGRPQPLESLGNA 1128 >UniRef50_A0YI01 PAS sensor diguanylate cyclase/phophodiesterase n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YI01_9CYAN Length = 753 Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 192/611 (31%), Positives = 296/611 (48%), Gaps = 30/611 (4%) Query: 506 RITVKDGIRHIRAL-ANRVLNKEGEVERLLGINMDMTEV----KQLNEALFQEKERLHIT 560 R V++ +R + L RV + E LL +N + + +++ EAL +EKE IT Sbjct: 149 RKQVEEQLRQVNTLLEQRVEERTTE---LLAVNTQLKQEIQHRQEIEEALIREKELAQIT 205 Query: 561 LDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYS 620 L+SIG+ V+ D KI ++NP+AE+++GW E G L VL I +EN Sbjct: 206 LESIGDGVITTDQCGKIDYLNPIAEQLTGWKNEAVRGQSLSQVLTIIDEITREPLENPVQ 265 Query: 621 ADTSRSAI---EQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQ 677 S++ I +L R G Y + S P+ G G V+V +DVT+SR + RQ Sbjct: 266 RVLSQADIVHLSDHTLLISRDGTEYAIEDSAAPIQDRQGQIQGVVVVFRDVTQSRLLSRQ 325 Query: 678 LSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGD 737 LS+ ASHD LT L NR +FE++++ + + Q + F+DLD+FK VNDS GH AGD Sbjct: 326 LSWQASHDHLTGLLNRQAFEQKIQAAITLTQTEEQHYVFCFLDLDKFKQVNDSCGHPAGD 385 Query: 738 ALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEG 797 LLR++ +L+ + +R++D LARLGGDEFGLLL C++ + +A + + D+ F WE Sbjct: 386 ELLRQVTALLQTRVRAADCLARLGGDEFGLLLHGCSLCDGQEVAETVRKLIQDFRFNWED 445 Query: 798 RVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAM 857 +V +G S G+ ID + A + AD ACYA+K GR + VY Q H E Sbjct: 446 KVFSIGVSIGLVKIDADTSNVASIFGAADAACYAAKARGRNCIHVY---QIEDH-ELIQR 501 Query: 858 SLDEQW-----RMIKENQLMMLAHGVAS-PRIPEARNLWLISLKLWSCEGEIIDEQTFRR 911 + QW + + +N+ + + +I R + + L+L G ++ F Sbjct: 502 QQERQWITEIDQALSKNRFHLYVQKIIPLQKITNPREHYEVLLRLVDETGNVVPPMAFLP 561 Query: 912 SFSDPALSHALDRRVFHEFFQ--QAAKAVASKGISISL---PLSVAGLSSATLVNDLLEQ 966 + L +D+ V + F + Q K A + L LS + + + + L Q Sbjct: 562 TAERYDLMFKIDQWVVNNFLECYQQLKNQAEDSLKNYLYMINLSESSIKNQEFIEFLKVQ 621 Query: 967 LENSPLPPRLLHLIIP---AEAILDHA-ESVQKLRLAGCRIVLSQVGRDLQIFNSLKANM 1022 L +P + L IP A A L E Q L+ GC + G + LK Sbjct: 622 LTPDKIPNQTLCFEIPETVAIASLSQTIEFTQTLKQLGCSCAIDHFGGGMSSLTYLKHLS 681 Query: 1023 ADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLI 1082 DYL +DG + N ++ ++ + +G+KTIA + ++ L IGVD Sbjct: 682 LDYLKIDGSFVKEIHRNKVEYAVLESVNKIGHAMGLKTIAEFIEQDTSIELLREIGVDFA 741 Query: 1083 YGEVIADAQPL 1093 G I QPL Sbjct: 742 QGYSINQPQPL 752 >UniRef50_B0C6M6 PAS sensor diguanylate cyclase/phophodiesterase, putative n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C6M6_ACAM1 Length = 935 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 220/798 (27%), Positives = 382/798 (47%), Gaps = 76/798 (9%) Query: 333 QFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALL 392 QF GY+ +E+ G + L P+ + ++ + + + T+ E Y + G W LL Sbjct: 174 QFTGYTPDEVIGNSCHFLQGPKTDPNTVDEIRQALKND-QTFEGEILNYRKMGQPFWNLL 232 Query: 393 AVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGI-----GIWEWEL 447 + + + G + + DI + K TE+ +L + T+ N AG +E+ L Sbjct: 233 RIKPLTNAQGEVHFLVGIQTDITQQKETEE---RLRQYETIFNSAGSYMALVDTCYEY-L 288 Query: 448 KPNIFSWDKRMFELYEIPP------HIKPNWQVWYECVLPE-DRQHA-EKVIRD----SL 495 N +K EI H +P +Q E + P+ DR + EKV R SL Sbjct: 289 AANPQYTEKFHKATTEISGQSMAKVHGQPFFQ---EIIKPDLDRCFSGEKVRRQHWVPSL 345 Query: 496 QSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINM---DMTEVKQLNEALFQ 552 F +E+ + + E+++G + D+T +K EAL + Sbjct: 346 DEARYFDIEY------------------VPFRNQQEQIIGAAISARDITVLKDTEEALRE 387 Query: 553 EKERLHITLDSIGEAVV-CIDMAMKITFMNPVAEKMSGWTQEEALGVPLL---TVLHITF 608 ++R H +IG + D ++ T+++ ++G E +G L V T Sbjct: 388 SQQRFH-DFAAIGADLFWETDAELRFTYLSEQHCSLTGSPIEAWIGKSCLDFYAVFKPTA 446 Query: 609 GDNGPLMENIYSADTSRSAIEQ-DVVLHCRS-GGSYDVHYSI-TPLSTLDGSNIGSVLVI 665 D+ + + A+E D+ + C+ G+ V SI P+ + G G + Sbjct: 447 WDH---------LNQTLDALEPFDIEIECQHLDGNARVLRSIGKPVFSPQGVFCGYRGIG 497 Query: 666 QDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFK 725 +D+TE+ + +QL++ A+HD+LT L NR FE QL +++ S +HAL F+DLD+FK Sbjct: 498 RDITEAHSLSQQLTHQATHDSLTGLVNRREFEHQLGQIIEEKQSNPIQHALCFLDLDQFK 557 Query: 726 AVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRII 785 VND+ GH AGDALL+++A L+ + +R +D+L+RLGGDEFGLLL +C++E AR + +I Sbjct: 558 IVNDTVGHLAGDALLKQVADLLQAHIRQTDILSRLGGDEFGLLLKNCSLEKARIVTENLI 617 Query: 786 SAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEP 845 S ++ + FIWEG++ ++GAS GI I + + ++AD+ACY++K+ GR RV +Y Sbjct: 618 SELSQFRFIWEGQLFKIGASIGIVPITADTDNLTLLFAKADVACYSAKDRGRNRVHLYHA 677 Query: 846 Q-QAAAHSERAAMSLDEQWRMIKENQLMMLAHGV----ASPRIPEARNLWLISLKLWSCE 900 Q Q M + + ++E++ + + +IP + I L+L + Sbjct: 678 QAQGVTEQHSELMQVATIRKALEESRFRLYYQPIVPLDTETKIPVC---YEILLRLQDTD 734 Query: 901 GEIIDEQTFRRSFSDPALSHALDRRVFHE-FFQQAAKAVASKGISISLPLSVAGLSSATL 959 G+I+ +F + L +D+ V + A + + IS+ LS + L L Sbjct: 735 GKILSPNSFLPAAERYGLMLEIDKWVIENVLIKYGAYFQSQENTRISINLSGSSLDDDAL 794 Query: 960 VNDLLEQLENSPLPP-RLLHLIIPAEAILDHAESVQ---KLRLAGCRIVLSQVGRDLQIF 1015 ++ + QL + L P ++ I AI + +++Q K++ GC L G F Sbjct: 795 LDFIQTQLNKTQLEPHKICFEITETVAISNFKQAIQCIEKIKEFGCHFALDDFGSGFSSF 854 Query: 1016 NSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLS 1075 + LK DYL +DG L ++ + +++++ I + + +KTIA V + L Sbjct: 855 SYLKRFPIDYLKIDGSLVRDMVEDATHQVMVSAINQICRAMHIKTIAEFVENGDTIVALE 914 Query: 1076 GIGVDLIYGEVIADAQPL 1093 IGVD + G + QPL Sbjct: 915 QIGVDYLQGYAMGKPQPL 932 >UniRef50_A3IWQ8 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) (Fragment) n=2 Tax=Cyanothece RepID=A3IWQ8_9CHRO Length = 822 Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 156/544 (28%), Positives = 280/544 (51%), Gaps = 26/544 (4%) Query: 523 VLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNP 582 + + EG + +LG ++TE K + +LF+EKE +TL+SIGEAV+ + I NP Sbjct: 281 IKDNEGNIVGILGTIENITEQKLVERSLFEEKELAKVTLNSIGEAVITTNPQGIIEDFNP 340 Query: 583 VAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSA---DTSRSAIEQDVVLHCRSG 639 +A++++G+T +EA+ P+ +L + G EN+ + ++ +L ++G Sbjct: 341 IAQQLTGFTIQEAIYQPIANILKL-IDKTGKTNENLINKILQNSQNQPKRHTGILENKNG 399 Query: 640 GSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQ 699 ++ I + + +G+VL+ +DVT++ ++ QLS+ ASHD LT LANR EKQ Sbjct: 400 EKCEIDIVINLIRGQNNQILGTVLIFRDVTQASQLAHQLSWEASHDNLTGLANRRELEKQ 459 Query: 700 LRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLAR 759 L + +++ + H L ++DLD+FK +ND+ GH AGD LL+++ +L+ + +RSSD+LAR Sbjct: 460 LSLAIESYKNEDVEHILCYLDLDQFKIINDTCGHVAGDELLKQVTNLLQTRVRSSDILAR 519 Query: 760 LGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAA 819 LGGDEF LLL C++ A+ IA + V ++ F W+ + VG S GI I+ Sbjct: 520 LGGDEFALLLKGCSLGKAKTIANNLRQLVKNFRFTWDNEIFSVGVSIGIVSINQEIQTIT 579 Query: 820 EVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQW-----RMIKENQLMML 874 V++ AD ACY +K+ GR V VY+ A + QW + + EN + Sbjct: 580 SVINAADSACYTAKSRGRNCVYVYKESDDEATKKIGQ----NQWIIRLNQALDENLFHLY 635 Query: 875 AHGVASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDR-------RVF 927 + + S + E + ++ L+L G ++ F S L +D+ +V+ Sbjct: 636 SQKIVSIQSTEKVHHEVL-LRLLDDSGNLVSPLAFFPSAERYNLMEEIDQWVISNFLKVY 694 Query: 928 HEFFQQAAKAVASKGISI-SLPLSVAGLSSATLVNDLLEQLENSPLPPR-LLHLIIPAEA 985 E +Q+ + + + ++ LS + + L N + E+L + P+ L I A Sbjct: 695 SEAYQKQSNLKKANFNHVHTINLSAISVKNDQLCNFIEEKLSYYNVNPKHLCFEITETTA 754 Query: 986 ILDHAES---VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMD 1042 I + +++ ++ ++ GC + G + + LK DYL +DG ++ + ++ Sbjct: 755 ITNLSQTIKLIEGIKQLGCYFAIDDFGSGMSSLSYLKNLPVDYLKIDGNFVKHLADDSLN 814 Query: 1043 EMLI 1046 L+ Sbjct: 815 HCLV 818 >UniRef50_C0N6D2 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6D2_9GAMM Length = 1203 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 170/587 (28%), Positives = 282/587 (48%), Gaps = 25/587 (4%) Query: 525 NKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVA 584 N EV + GI D+TE K A Q+ E+L + ++ A+V +D A +I ++NP Sbjct: 626 NDNKEVIGVEGIARDITEFK----ASQQKLEKLSLAVEHSPNAIVVMDRAGEIEYVNPKF 681 Query: 585 EKMSGWTQEEALGV-PLLTVLHITFGDNGP-----LMENIYSADTSRSAIEQDVVLHCRS 638 ++G+ +E LG P L I G N P + + I D R ++ ++ Sbjct: 682 TSITGYHNDEKLGRWPDL----INSGVNMPGIYDEIWQTIRRGDDWRGELQ----YRKKN 733 Query: 639 GGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEK 698 G Y I P+ +G V D+TE+R++ + SY A+HD LT L NR F+ Sbjct: 734 GDLYWAQELIAPMLNSEGHATHFVATQIDITEARRLSEETSYQATHDQLTGLINRHEFDL 793 Query: 699 QLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLA 758 +L ++ HAL F+DLD+FK VND+ GH AGD LLR++ SL+ S +RS D +A Sbjct: 794 RLERVVLAAKHNLTEHALCFLDLDQFKLVNDTCGHIAGDELLRQIGSLLQSNVRSRDTIA 853 Query: 759 RLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQA 818 RLGGDEF +L+ C+++ A +I+ + D+ F W+ VG S G+ +ID + + Sbjct: 854 RLGGDEFAVLMEHCSIDRAYKACEQILQLLQDFRFHWQDYTFTVGGSIGLAIIDQHTRDS 913 Query: 819 AEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWR-MIKENQLMMLAHG 877 E + D ACY++K+ GR RV V+ R + + + +++ ++ A Sbjct: 914 NEALKHVDTACYSAKDAGRNRVEVHREDSLRLKQRRGEIHWSTEINDALDDDRFLLYAQP 973 Query: 878 VASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA 937 + PE + + +++ +GEI F + + +DR V F K Sbjct: 974 IQPVMNPERGMSYEVLVRMLRKDGEISPPGAFLPAAERYNSINRIDRWVVSHTFDWLNKN 1033 Query: 938 VA--SKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQK 995 A +K ++S+ LS + +++ ++EQLE + +P + I A + + + K Sbjct: 1034 AAKLNKVATVSINLSGLSMGDESMLTFIIEQLETAKIPAEKIKFEITETAAIANLRAATK 1093 Query: 996 ----LRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQG 1051 LR +G L G L F LK D L +DG ++ + +D ++ I Sbjct: 1094 FIETLRESGIHFSLDDFGSGLSSFAYLKKLKVDSLKIDGMFVKDMLIDPLDFEMVKSINE 1153 Query: 1052 HAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 +G++TIA V ++ LS IGVD + G I P+D ++N Sbjct: 1154 IGHVMGLETIAEFVESEAILAKLSEIGVDFVQGYAIGKPAPIDDILN 1200 >UniRef50_A1SX34 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SX34_PSYIN Length = 799 Score = 235 bits (600), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 183/661 (27%), Positives = 317/661 (47%), Gaps = 41/661 (6%) Query: 461 LYEIPP-HIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITV-KDGIRHIRA 518 +YE+ P +K + + ++ + +D + + I DS ++ + + ++R+ + K GIR + Sbjct: 135 VYELSPLQLKKDADLAFKRIHLDDVEAIHQQIADSAKNLTVWHQQYRVVLPKAGIRWLEG 194 Query: 519 LANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKIT 578 A G IN D+TE K L L E ER +TL SIG+AV+ + + Sbjct: 195 NATPEARANGSTLWHGYIN-DITERKALELTLSNEFERTRVTLSSIGDAVITTNEQQVVE 253 Query: 579 FMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQ-------- 630 ++NP+AE ++GW +A+G P+ V +I N ++ +++AI + Sbjct: 254 YINPIAEHLTGWALADAIGQPVTRVFNII---------NQHTRLVAKTAIARCLDERAIV 304 Query: 631 ----DVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSY-SASHD 685 D VL + G Y V S P+ IG V+V +DVT +++ +++Y ASHD Sbjct: 305 GPVCDTVLLSKDGNEYWVEKSAAPIFAPGDVIIGVVMVFRDVTGQKRLREEVAYHRASHD 364 Query: 686 ALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELAS 745 LT LANR F++ L + ++ S H L IDLD+FK +NDS GH AGD LL+E++ Sbjct: 365 HLTGLANRREFDRMLLEMFESSISPGVAHVLCCIDLDQFKLINDSCGHFAGDTLLKEISV 424 Query: 746 LMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGAS 805 ++ +R+ D++AR+GGDEF +L ++++A+ IA + + F + + + VGAS Sbjct: 425 VLTQTVRAKDLVARIGGDEFAILFQSSDLQAAKQIAQDVCDKIAQIRFHHKDKFYHVGAS 484 Query: 806 AGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQW-- 863 G+ +D A +IAC+A+K+ GRGRV +Y +R M QW Sbjct: 485 IGVVPLDGRWDNAEAAQQAGEIACFAAKHEGRGRVHMYTDLDKTVMEQRDQM----QWAS 540 Query: 864 ---RMIKENQLMMLAHGVASPRIPEARNL-WLISLKLWSCEGEIIDEQTFRRSFSDPALS 919 + I EN+ + A + + + L + + L+L G ++ F S L+ Sbjct: 541 RLQQAIDENRFELFAQPIMALDEQAEQGLHFEVLLRLRETGGALVSPAVFMASAEQFGLA 600 Query: 920 HALDRRVFHEFFQ--QAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLL 977 +D V + + + K I++ LS + L+E L+++ +P + + Sbjct: 601 TQIDHWVVNNVLKWMKTHADELEKVHIIAVNLSGNSVGDRDFHQFLIEALDHAQVPVQKI 660 Query: 978 HLIIPAEAILDH----AESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELC 1033 I A +++ E + + G +I L G + LK DYL +DG+ Sbjct: 661 SFEITETAAIENLDIATEFIAMVHQRGAKISLDDFGSGMSSMAYLKKLPVDYLKIDGQFV 720 Query: 1034 ANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPL 1093 +++ + +D ++ I+ A G TIA V ++ L IGVD G I QP+ Sbjct: 721 KDMENDTVDCAMVRSIKQIADLTGKITIAEFVENAKILMLLKDIGVDFAQGYHIGKPQPI 780 Query: 1094 D 1094 + Sbjct: 781 N 781 >UniRef50_C8QXB4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QXB4_9DELT Length = 1018 Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 195/715 (27%), Positives = 342/715 (47%), Gaps = 53/715 (7%) Query: 410 QIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELK--------PNIFSWDKRMF-- 459 Q E I EL+ E + ++E+ +A I I + E + +F +D Sbjct: 314 QFEFIQELRCREGRERTVIEQAPIA-----ICIVDQEHRIRTVNPMLERMFGYDAEQLLQ 368 Query: 460 -ELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRA 518 L+ + P + VW++ V+PE + + LQ+R KL Sbjct: 369 NSLFTLLPEV-----VWHD-VVPEPPAYERRGGEFMLQNRRGEKLTV------------- 409 Query: 519 LANRVLNKEGEVERLLGINM-DMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKI 577 LA+ V KE + + L + + D+T K+ +AL + KER +TL +IGE V+ + + Sbjct: 410 LASAVALKEPDDKPLTALFLTDITGRKRTEQALAEAKERAMVTLAAIGEGVITTNNRGVV 469 Query: 578 TFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDN-GPLMENIYSA-DTSRSA-IEQDVVL 634 ++NP AE+++GWT+E+ +G+ L V + ++ PL + A R+ I + +L Sbjct: 470 DYLNPAAERLTGWTREDVMGMELDQVFDLRDEESRQPLSNPVERALRLDRTVNITRRALL 529 Query: 635 HCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRA 694 + + + TP+ IG+V+V +DV++ R R+++ A +D LT L NR Sbjct: 530 VTNDSREFSLQITATPIHDRQQKIIGAVMVFRDVSKIRVAERRMAREAKYDELTGLRNRR 589 Query: 695 SFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSS 754 F L L + + H L ++DLD+FK +ND+ GH AGD +L+++A LM + LR++ Sbjct: 590 EFNALLNQALAAASEEGKEHVLGYLDLDKFKIINDTCGHDAGDEVLKQVAELMQAQLRNT 649 Query: 755 DVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDN 814 D+LARLGGDEF +LL C +E+ IA +I A+ +Y F W GR + S G+ + + Sbjct: 650 DILARLGGDEFAILLSSCPMEAGHKIAEQIRRALEEYRFTWHGRAFELSVSIGLVQLQAD 709 Query: 815 NHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMML 874 + +V+ AD ACY +K GR R+ Y+P QA+ S A+ D + I EN+ + Sbjct: 710 SGTLDDVLKAADTACYQAKEQGRNRIQQYQP-QASQGSAAGALWQDRIRQGIAENRFTLW 768 Query: 875 AHG----VASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEF 930 A + R+P + + +SL L +G + E +F L +++ Sbjct: 769 ARRSRILSSDQRLP---HYYELSLTLRDDQGHYLPESSFLPMAERHQLIMDVEKWKISTL 825 Query: 931 FQQAAKAVASKGISISLPLSVAGLS-SATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH 989 + A + +L L+ L S L +L+Q E L + + I + + Sbjct: 826 MARVATTCDPNKV-YALKLATMALQVSEQLCPFILQQAERCGLNSKNIAFEINETDLTAN 884 Query: 990 AESVQK----LRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEML 1045 V++ L+ AG R+ + + G + F L+ D+L LD + ++ N +D +L Sbjct: 885 FTRVKRLFKALKKAGFRLTIDRFGYNRGSFGHLEELAVDFLKLDAGITNSLLENHVDYIL 944 Query: 1046 ITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNSS 1100 + Q + + IA V ++ + + +D + GEVI +PL+ +++ S Sbjct: 945 AETVSRVGQLMRLPVIATGVDDASLLAAMEEMKIDYVLGEVIDPGRPLEEIISRS 999 >UniRef50_C0N6D3 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6D3_9GAMM Length = 805 Score = 232 bits (591), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 171/597 (28%), Positives = 289/597 (48%), Gaps = 22/597 (3%) Query: 512 GIRHIRALANRVLNKE-GEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEA--- 567 +RH +L LN+E + E L + E+ +N L + + +TL S EA Sbjct: 195 NLRHKNSLLVNELNREVNQREEL--VQNRTQELLTVNAQLKASQAHM-LTLSSAVEASPN 251 Query: 568 -VVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRS 626 ++ D I ++NP E ++G+ + +G ++ + N ++E ++++ S Sbjct: 252 GILITDAEGIIQYVNPRCEHITGYMAADVIGKT--PEVYRSDHHNNEMIEEMWASIRSGK 309 Query: 627 AIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDA 686 ++ +SG Y + + P+ +G+ V + +D+TE+R + +LSY A+HD Sbjct: 310 EWNGEIQNRRKSGELYWIKEYVAPIRNDEGTITHFVAIQEDITEARVLANKLSYQATHDN 369 Query: 687 LTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASL 746 LT L NR FE++L L+Q HAL FIDLD+FK +ND+ GH AGD LLR+L Sbjct: 370 LTGLINRTEFERRLIELVQDARQHDSVHALCFIDLDQFKVINDTCGHIAGDELLRQLGQR 429 Query: 747 MLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASA 806 ++ +R SD LARLGGDEF +L+ C+ + +AT + + + F+W+ RV +GAS Sbjct: 430 LIGQVRKSDTLARLGGDEFAILMRHCDPGQSEKVATEVREVIELFQFVWDSRVFTIGASI 489 Query: 807 GITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMS-LDEQWRM 865 G++ I + EV+ QAD ACYA+KN GR RV +Y+ ++ ++E Sbjct: 490 GVSSIHRHTTDMTEVLKQADTACYAAKNAGRNRVYIYQDDDKHLVEQQGEFHWVNEIKLA 549 Query: 866 IKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRR 925 + EN+ + + S + +A ++ + L+L + +G++ F S LS +DR Sbjct: 550 LTENRFELFVQPITSAKSGKAE-IYEVLLRLRNKQGDLSPPSAFLPSAERYNLSDKVDRW 608 Query: 926 VFHEFFQQAAKAVAS----KGISISLP-LSVAGLSSATLVNDLLEQLENSPLPPRLLHLI 980 V + F K + + I+I+L S+ L++DL E+ S ++ I Sbjct: 609 VLEKTFDWLEKHINQVPDLRKIAINLSGASLGNDEMLKLISDLFEKARFS--ASKIKFEI 666 Query: 981 IPAEAILDHAES---VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQ 1037 AI + E+ + +L GC L G L F LK + +DG ++ Sbjct: 667 TETAAISNLREATRFISELSKLGCEFSLDDFGSGLSSFGYLKHLPVKSIKIDGMFVKDMA 726 Query: 1038 GNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLD 1094 + +D ++ I +G+KTIA V V L IG+D G + P+D Sbjct: 727 HDPLDFEMVKSINDIGHVMGLKTIAEFVENEDVWQKLQSIGIDYGQGYHLGRPVPID 783 >UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacteria RepID=A2SDI4_METPP Length = 1006 Score = 231 bits (590), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 179/604 (29%), Positives = 290/604 (48%), Gaps = 25/604 (4%) Query: 477 ECVLPEDRQHAEKVIRDSLQSRSPFK-LEFRITVKDG-IRHIRALANRVLNKEGEVERLL 534 E + E R+ AE+ I + +++++ + G + ++ A + G+ R L Sbjct: 363 EFLTAESRERAERSIIPRFMREGELRDMDYQMVTRSGEVLDVQISAIWETDAHGQPLRTL 422 Query: 535 GINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEE 594 + D+TE K+L L EKER+ +TL SIG+ V+ D A +IT++NPVAE+M G + Sbjct: 423 AVLKDVTEQKRLALELAAEKERIEVTLHSIGDGVISTDEAGRITYLNPVAEQMVGCLLAQ 482 Query: 595 ALGVPLLTVLHITFGDNG-PLMENIYSA--DTSRSAIEQDVVLHCRSGGSYDVHYSITPL 651 A G+P V+ + ++G PL + D + + L RSG Y V S P+ Sbjct: 483 ARGLPFAQVVQLFDQESGAPLPSPVEQCLQDREVYGVRESAALRHRSGRDYGVQISAAPI 542 Query: 652 STLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTH 711 + DG +G+V+V QDVTE+R + +++SY A HD LT L NR F+ ++ Q+ Sbjct: 543 AGRDGRVLGAVMVFQDVTEARGLAQKMSYLAHHDGLTGLPNRVLFQDRVHQACQSGRRHG 602 Query: 712 QRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD 771 +R A++F+DLD FK VNDS GHA GD LL+ +A + LR+SD + RLGGDEF +LL D Sbjct: 603 RRFAVIFMDLDHFKHVNDSLGHAVGDELLKAVAQRLTGALRASDTICRLGGDEFVVLLSD 662 Query: 772 CN---VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIA 828 + V+ +A +I+ V + V+ VGAS GI L + +M +AD A Sbjct: 663 LDDVEVDGVAEVAKKILRQVAQPCVLGGTEVN-VGASLGIALFPGDGEDPDTLMKRADAA 721 Query: 829 CYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARN 888 Y SK GR R + A S R + D + R + Q ++ V R +A Sbjct: 722 MYRSKREGRNRYHFFSKAVDDAASARLQLEADMR-RALAAGQFIVHYQPVVHGRTRDA-- 778 Query: 889 LWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAK------AVASKG 942 + + +L W G+ + F A L + H +QA + A G Sbjct: 779 VAVEALLRWDRAGQGLQSPAV---FIPVAEESGLIVPMGHWVLRQACEQLRAWSGTALGG 835 Query: 943 ISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRL 998 IS+++ +S L+ A V+ + + L + + L I ++ E+ +++L+ Sbjct: 836 ISVAVNVSPVQLAQADFVDTVADVLHATGVDGSRLEFEITESTLMQDPEATLEMLRRLKG 895 Query: 999 AGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGM 1058 G RI + G LK D L +D +++ + D L+ I A+ L + Sbjct: 896 LGVRIAIDDFGTGYSSLGHLKRFPVDTLKIDHTFVRDLEADADDRELVRAILAMARSLRL 955 Query: 1059 KTIA 1062 +A Sbjct: 956 HVVA 959 >UniRef50_B8GQU5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GQU5_THISH Length = 732 Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 188/692 (27%), Positives = 327/692 (47%), Gaps = 63/692 (9%) Query: 455 DKRMFELYEIPPHIK-------------PNWQVWYECVLPEDRQHAEKVIRDSLQSRSPF 501 D R+ L+ I PH K + W + + PEDR+ ++ + + +++SP+ Sbjct: 46 DARLTRLH-ISPHFKHLVQGNGAHGAYLKDHDRWVQYLHPEDRERVQQALAGTREAQSPY 104 Query: 502 KLEFRITVKDGI-RHIRALANRVLNKEGEVERLLGINMDMT---EVKQLNEALFQEK--- 554 +++R++ G+ R +R + V + + + G+ MD++ E++ EAL ++ Sbjct: 105 CIDYRLSDAKGVTRWVRDMGIYVGDPQQGGTVIQGVMMDVSLEHELRDRIEALAKQARRA 164 Query: 555 -------------ERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLL 601 +++H TL+ A++ +D A +I++ N A +++G T+ E LG Sbjct: 165 EAEAAASKAGELLQQMHETLEHTASAILRLDAAGRISYANQAALRLTGHTRPELLGHDFA 224 Query: 602 -TVLHITFGDN-----GPLMENIYSADTSRSAIE-QDVVLHCRSGGSYDVHYSITPLSTL 654 +L+ G P +++ SR Q + L + +++ + P Sbjct: 225 QALLNAPEGRRPADGPAPYLKDCREVLRSRQPHHLQGLTLWRKDARPLEINCQLAP---- 280 Query: 655 DGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRH 714 G+ G++L ++D TE R + QL Y +HDALT L NR +L L+ + H Sbjct: 281 -GAEGGAILTLEDATEYRSLSTQLQYQVTHDALTGLLNRRELLIRLEQALRQARNGHNNG 339 Query: 715 ALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNV 774 A+++IDLD+FK +ND++GH AGD LLR+++SL+ +R D LARLGGDEF ++L DC Sbjct: 340 AMLYIDLDQFKVINDTSGHTAGDELLRQISSLLTGAIRQGDALARLGGDEFAVILNDCPA 399 Query: 775 ESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKN 834 A ++ + D+ F WE + + V AS G+ I+ + VMS AD AC+++K+ Sbjct: 400 SEIMDTADQLREHIADHVFRWEDKSYNVTASIGVVPINRESGNVITVMSAADTACHSAKD 459 Query: 835 GGRGRVTVYEPQQAAAHSERAAMSLDEQW-----RMIKENQLMMLAHGVASPRIPEA-RN 888 GR R+ ++ + + M +W + ++E + + A + E R Sbjct: 460 KGRNRIHAFKLDDTSMIRRQGEM----RWVARIHQAVQEGRFSLFAQTIQPVEAREKHRG 515 Query: 889 LWLISLKLWSCEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA-VASKGISI- 945 L L EG E+I F + LS +DR V F A A + +S+ Sbjct: 516 THLEMLIKMQGEGDELIPPGVFLPAAERYNLSGTIDRWVLQHTFSWIADAGLDENRLSLC 575 Query: 946 SLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIP---AEAILDHAES-VQKLRLAGC 1001 ++ LS + ++ ++ QL+ LP L+ I A A L+ A + ++ L GC Sbjct: 576 AINLSGHSVGDPAFLDYVVSQLKRHALPATLICFEITETVAIANLNQARTMMETLGGMGC 635 Query: 1002 RIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTI 1061 R L G + F L+ DYL +DG ++ + D L+ I A +G +TI Sbjct: 636 RFALDDFGSGMSSFGYLRTLPVDYLKIDGLFVKDIAKDPTDLALVRSINDIAHVMGKRTI 695 Query: 1062 AGPVVLPLVMDTLSGIGVDLIYGEVIADAQPL 1093 A V ++D L +GVD G IA+ P+ Sbjct: 696 AEFVESQEILDRLQEMGVDYAQGNFIAEPVPV 727 >UniRef50_A0Y401 PAS sensor diguanylate cyclase/phophodiesterase n=1 Tax=Alteromonadales bacterium TW-7 RepID=A0Y401_9GAMM Length = 739 Score = 228 bits (582), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 191/679 (28%), Positives = 322/679 (47%), Gaps = 61/679 (8%) Query: 470 PNWQVWYECVLPEDRQHA------EKVIRDSLQSRSPFK-LEFRITVKDGIRHIRALANR 522 P W+ VLP K + DS + + F+ ++ I KDG R L + Sbjct: 70 PTLDEWWGKVLPNSHYRDCVMSLWHKKLIDSKKMNTRFEPMQLTIQCKDG-RKRTVLGSA 128 Query: 523 VLNKEGEVERLLGINMDMTE--------------VKQLNEALFQEK-------------- 554 V K G+ +L I D+TE + +L +L Q+K Sbjct: 129 VPLKNGDASIILNIFYDITELEYENGQIGELSNIITELTLSLEQQKNDLILEKQKASVNT 188 Query: 555 ERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDN-GP 613 ERL + + + + D+A + + +P + M G+ ++E L T + D+ P Sbjct: 189 ERLSLAMKGANDGLWDWDIANEKMYYSPRWKSMLGYKEDE-LTNSFATWERLVHPDDLAP 247 Query: 614 LMENIYSADTSRSA-IEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESR 672 + I+S S++ E + + ++G ++ + + +G V D+T + Sbjct: 248 AVAKIHSFMESKTKHYEAEFRMRHKNGSYVNILSRAFVVESEEGEITRLVGTHVDITARK 307 Query: 673 KMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAG 732 K +LSY +SHD+LT LANR F++++ +LL HAL ++DLD+FK VND+ G Sbjct: 308 KSEEKLSYQSSHDSLTGLANRREFKRRVELLLSVAAEKRVDHALCYMDLDQFKVVNDTCG 367 Query: 733 HAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYH 792 H AGD LLR+L SL+ ++R +DV+ARLGGDEF +L+ +C+ ++A + + I + DY Sbjct: 368 HLAGDELLRQLGSLLQKVVRKTDVVARLGGDEFAVLMENCSFDNAHRVTSLIQKEIEDYR 427 Query: 793 FIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTV-YEPQQAAAH 851 F+WEGR R+G S G+ I D EV+ AD+ACY +K GR R+ V Y+ + A Sbjct: 428 FVWEGRSFRIGVSMGLIQITDKYVDFTEVLKLADVACYIAKEKGRNRIHVHYDDDEELAV 487 Query: 852 SERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQTFRR 911 + ++ I EN+ + A + P + + + L++ +G II Sbjct: 488 HQGEMQWVNRVQDAIDENRFKIYAQ-LIEPLACDKNKHYELLLRMVDDQGGIIPPG---- 542 Query: 912 SFSDPALSHALDRRVFHEFFQQAAKAVAS-----KGIS-ISLPLSVAGLSSATLVNDLLE 965 +F PA + L +V + A K + + KG++ +S+ LS L++ + + E Sbjct: 543 AFLPPAERYQLIVKVDSWMIENAFKMILNNPNFLKGVNFLSINLSGQSLTNEDFLIFVTE 602 Query: 966 QL----ENSPLPPRLLHLIIPAEAILD---HAESVQKLRLAGCRIVLSQVGRDLQIFNSL 1018 QL E+S ++ I AI + ++ + +L++ GC L G L F L Sbjct: 603 QLTLLGEHS---EKICFEITETAAISNLELASKFISQLKVLGCCFALDDFGSGLSSFGYL 659 Query: 1019 KANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIG 1078 K DYL +DG +++ + +D ++ I +GMKTIA V + TL +G Sbjct: 660 KNLKVDYLKIDGIFVKDIEVDPIDHAMVKSINEIGHVMGMKTIAEFVETSRIKQTLLEMG 719 Query: 1079 VDLIYGEVIADAQPLDLLV 1097 VD G + QP++ L+ Sbjct: 720 VDYAQGYAVHKPQPIEELL 738 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/126 (27%), Positives = 67/126 (53%), Gaps = 5/126 (3%) Query: 429 ERITLANEAGGIGIWEWELKPNIFSWDKRMFEL--YEIPPHIKPNWQVWYECVLPEDRQH 486 ER++LA + G+W+W++ + R + Y+ + ++ W V P+D Sbjct: 189 ERLSLAMKGANDGLWDWDIANEKMYYSPRWKSMLGYK-EDELTNSFATWERLVHPDDLAP 247 Query: 487 AEKVIRDSLQSRSP-FKLEFRITVKDG-IRHIRALANRVLNKEGEVERLLGINMDMTEVK 544 A I ++S++ ++ EFR+ K+G +I + A V ++EGE+ RL+G ++D+T K Sbjct: 248 AVAKIHSFMESKTKHYEAEFRMRHKNGSYVNILSRAFVVESEEGEITRLVGTHVDITARK 307 Query: 545 QLNEAL 550 + E L Sbjct: 308 KSEEKL 313 >UniRef50_B5JW24 PAS sensor diguanylate cyclase and phophodiesterase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JW24_9GAMM Length = 796 Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 165/583 (28%), Positives = 283/583 (48%), Gaps = 42/583 (7%) Query: 539 DMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGV 598 DM + + +AL +E D ++ ++ +N + G+ + +G Sbjct: 230 DMQKRELAEKALSASRENYRALYDHNPSMFFTVNFEGELISVNEFGARQLGYDVQNLVGQ 289 Query: 599 PLLTVLHITFGDNGPLMENIYSADTSRSAI-EQDVVLHCRSGGSYDVHYSITPLSTLDGS 657 P+ + GD+ ++ + + +DV + + G V + ++ G Sbjct: 290 PIGNLYR--HGDSESVIYQLSKEHIEEGKLHRRDVQMVAKDGSPLWVRETARVINGRHGE 347 Query: 658 NIGSVLVI-QDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHAL 716 N VL++ +D++E+R++ QLS+ ASHDALT L NR FE++LR L++ + HAL Sbjct: 348 N--QVLIVSEDISEARQLSNQLSHQASHDALTGLVNRGEFERRLRQLVERAHVDDSGHAL 405 Query: 717 VFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVES 776 +++DLD+FK +ND+ GH AGD LLR+LA L+ +R D LARLGGDEFG+L+ +C +E Sbjct: 406 LYLDLDQFKIINDTCGHVAGDELLRQLAGLLKHKVRKGDTLARLGGDEFGVLVENCTMED 465 Query: 777 ARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGG 836 A +A + V + F W R+G S G+ I + A++MSQAD ACYA+K+ G Sbjct: 466 AERLAQTMCDVVASFQFFWGVSSFRIGVSIGLASIASGSGDYADIMSQADSACYAAKDLG 525 Query: 837 RGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVA-SPRIP------EARNL 889 R RV +Y A M QW E+ L + P +P + R+ Sbjct: 526 RNRVHIYRENDAELARRFGEM----QWVSKIESTLEQDRFELYFQPIVPIDNTRLDGRH- 580 Query: 890 WLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISI---- 945 + + +++ +G I+ +F + L +DR+V + + +S+ Sbjct: 581 YEVLVRMRDVDGNIVPPASFMSAAERYNLMGRIDRKVVSQTL---------RWLSLHPDH 631 Query: 946 --SLPLSVAGLSSATLVND-----LLEQLENSPLPPRLLHLIIPAEAILDH----AESVQ 994 +L + LS TL++D + ++L+ + PR L + A +++ ++ ++ Sbjct: 632 LKNLSVCSVNLSGQTLMDDDFLEFIFDELKQWNVDPRKLCFEVTETAAIENLTKASDFIR 691 Query: 995 KLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQ 1054 L+ GC+ L G L F LK DY+ +DG ++ + +D ++ I AQ Sbjct: 692 SLKDRGCKFSLDDFGSGLSSFAYLKNLPVDYIKIDGLFVRDIVKDPIDYSMVRSINEIAQ 751 Query: 1055 RLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 +G KT+A V L+++ L IGVD G I+ QP+ LV Sbjct: 752 VMGKKTVAEFVEDELILNALRNIGVDYAQGYYISRDQPISRLV 794 >UniRef50_C4I4I7 Sensory box/ggdef/eal domain protein n=36 Tax=Burkholderia RepID=C4I4I7_BURPS Length = 872 Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 166/553 (30%), Positives = 265/553 (47%), Gaps = 29/553 (5%) Query: 560 TLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENI- 618 L S+ EAV+ + +A + F+N AE++ G+ +G P+ +VL + + G ++ + Sbjct: 323 ALSSVAEAVITVGLAKNVDFINNAAEQLLGYPAAACVGAPVSSVLMLLDKETGHAVDIVD 382 Query: 619 -YSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQ 677 + A R+ I+++V L R V +I+ + +IG VL+++++T ++ L Sbjct: 383 EFWAREERTPIKREVHLLRRDHSKIVVQTTISEMGDRVHGHIGYVLILRNMTREQQFLES 442 Query: 678 LSYSASHDALTHLANRASFEKQLRILLQTVNSTHQR--HALVFIDLDRFKAVNDSAGHAA 735 L++ A+HD LT L NR FE++L I L S +R L+ +DLDRFK +ND+ GHAA Sbjct: 443 LAWQATHDVLTGLVNRVEFERRLEIALADTASGKERADSMLLMLDLDRFKEINDTCGHAA 502 Query: 736 GDALLRELASLMLSMLRSSDVLARLGGDEFGLLLP-DCNVESARFIATRIISAVNDYHFI 794 GDA+LRE+ S L DVLARLGGDEFG+LLP ++ A R+ ++ D+ F+ Sbjct: 503 GDAMLREVTQRFQSCLDDDDVLARLGGDEFGVLLPHGAGSWPSKNKAERLRRSLEDFVFL 562 Query: 795 WEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQ--QAAAHS 852 WEG V S G+ + + ADIACY +K GR R+ + +P Q A H Sbjct: 563 WEGERFTVSVSIGVLELCKAPRNLEMAVKLADIACYIAKERGRNRIQLADPSDLQQARHV 622 Query: 853 ERAAMSLDEQW-RMIK---ENQLMML-----AHGVASPRIPEARNLWLISLKLWSCEGEI 903 D QW R IK EN L H R PE + L++ G Sbjct: 623 G------DVQWSRRIKTALENDGFRLYVQPIVHTRPDSRTPERAE---VLLRMMDSAGRD 673 Query: 904 IDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLVNDL 963 I F + L +DR V F++ + A + ++ LS A +S + + Sbjct: 674 ISPAAFLPAAERYGLMGLIDRWVIRTVFRKLSALPAREYHEYNVNLSGASISDERFLEFV 733 Query: 964 LEQLENSPLPPRLLHLIIPAEAILDHAESVQK----LRLAGCRIVLSQVGRDLQIFNSLK 1019 + +L +S L P ++ I + + E + LR GCR L G + F L+ Sbjct: 734 IAELLSSGLEPSVICFEITETIAVKNLELASRFMGELRTIGCRFALDDFGAGMSSFRYLR 793 Query: 1020 ANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGV 1079 + DYL +DGE +N+ + + +++ I A + T+A V + + L +G+ Sbjct: 794 SLPIDYLKIDGEFVSNMMSDRVSYGVVSAINEVAHSMRCSTVAEHVESEVELAMLRELGI 853 Query: 1080 DLIYGEVIADAQP 1092 D G A P Sbjct: 854 DFCQGYFFAQPSP 866 >UniRef50_D0IWU4 Diguanylate cyclase/phosphodiesterase with n=3 Tax=Comamonadaceae RepID=D0IWU4_COMTE Length = 869 Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 167/584 (28%), Positives = 282/584 (48%), Gaps = 36/584 (6%) Query: 544 KQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTV 603 +Q+ E L EKER TL ++ +AV+ + + ++NP A + G ++ L P+ V Sbjct: 236 EQVQEGLNSEKERAETTLAALSDAVITTNAKGMVNYVNPAAIGLLGLQKQSYLDKPIKQV 295 Query: 604 LHITFGDNGPLMENIYSA---DTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTL------ 654 L D E + + DT + + +D H +SI P+ L Sbjct: 296 LQFYTMDASITSEGLLAQLVNDTKETTVVRDEQTHW----VRRTDHSIVPVKVLGSAMQR 351 Query: 655 DGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRH 714 DG G+V V++DV+ ++ + Q+S++A HD LT L NR FE++L+ +L + + Sbjct: 352 DGQASGAVFVLRDVSREQQYMDQISWNARHDTLTGLENRGEFERRLQKMLTQGLHQVKPY 411 Query: 715 ALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNV 774 AL++IDLD+FK +N+++GHAAGD +L E++ ++ + LR +D LAR+GGDEF +LL +C Sbjct: 412 ALLYIDLDQFKLINETSGHAAGDEVLCEVSRMLQANLRETDCLARMGGDEFAVLLENCPP 471 Query: 775 ESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKN 834 + IA ++ A W ++ R G S G + + A++++ D+ACY +K Sbjct: 472 SNVASIAEKLRLAAQQLQTTWGEKILRTGFSIGAVHVPGDAVNASDLLRMVDMACYQAKE 531 Query: 835 GGRGRVTVYEPQQAAAHSERAAMSLDEQWRM-IKENQLMMLAHGVASPRIPE-ARNLWL- 891 GR +V Y+ + + M + R + E++ + A +A + + +R+ + Sbjct: 532 RGRNKVFFYKAEDGIYSRYVSEMEWATRIRTALDEDRFCLYAQSIAPLQARKHSRHGGMH 591 Query: 892 --ISLKLWSCEGEIIDEQTFRRSFSDPALSHALDR----RVFHEFFQQA--AKAVASKGI 943 + L+L G+I+ F + L +LDR R QQ AK V + I Sbjct: 592 FEVLLRLRDENGQILAPGHFIPAAERYGLMPSLDRWVITRALQTLAQQPGHAKLVETCAI 651 Query: 944 SISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLA 999 ++S P L L+ + EQL+ + P+ L I + + + + +Q LR Sbjct: 652 NLSGP----SLDDDGLLEFVKEQLQQHAIAPQKLCFEITETSAIGNLSNATRLIQSLRAL 707 Query: 1000 GCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMK 1059 GCR L G + LK DYL +DG ++ + D ++ +I Q LG K Sbjct: 708 GCRFALDDFGVGMSSLTYLKQLPVDYLKIDGGFVRDMLKDKGDHAMVEMINRIGQTLGKK 767 Query: 1060 TIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNSSYFA 1103 TIA V + + L +GVD + G IA +P+ S YF Sbjct: 768 TIAEFVESREIAEELMTMGVDYVQGYAIARPKPM----TSEYFC 807 >UniRef50_Q6LLM3 Hipothetical sensory box/GGDEF family protein n=4 Tax=Vibrionaceae RepID=Q6LLM3_PHOPR Length = 1052 Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 167/604 (27%), Positives = 279/604 (46%), Gaps = 26/604 (4%) Query: 508 TVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEA 567 +V DGIR + + +G +++L D+T Q+ + L + + + + Sbjct: 450 SVDDGIRVLDISIKNMPTAQGNSDQVLIEARDVTSRHQMEDKLREREVSYRLLYEQQPVI 509 Query: 568 VVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSA 627 ++ ID +I +N A + G+ + + LG + + DN L + S+ S Sbjct: 510 LLAIDSQARIQSVNQFAADLLGYKKRDMLGHKVTDF----YLDNAVLPQQFISS----SR 561 Query: 628 IEQDVVL-------HCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSY 680 + D ++ C G V +I S + +LV +D+T +R++ +L Y Sbjct: 562 LNDDQIVWRRQLRYKCAEGKVVWVRETIRSTQ----SKLQLLLVGEDITSTRELEEKLEY 617 Query: 681 SASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALL 740 A HD LT L NR FE QL +L RHA+ +IDLD+FK +ND+AGH AGD L Sbjct: 618 QACHDYLTGLFNRNYFETQLENVLVEAREHETRHAMFYIDLDQFKVINDTAGHEAGDEAL 677 Query: 741 RELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVH 800 +++A L+ + L+RLGGDEF ++L C A I+ + F W+ Sbjct: 678 KQVALLLQEITPEHATLSRLGGDEFAIILRHCTQHEAVTFGDEILHLLEGAEFFWQSTRF 737 Query: 801 RVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMS-L 859 S GI LID+ +V +QAD ACYA+K+ GR R+ +Y P M + Sbjct: 738 SFSCSLGIRLIDETAGSPQQVHAQADTACYAAKDEGRNRLHLYHPDDEELKRRELEMEYV 797 Query: 860 DEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALS 919 + + + E + + A +A + + I +++ + +G ++ F + ++ Sbjct: 798 NHIHKALAEQRFELHAQQIAPVASGSTKQHYEILVRMRNSDGSMVSPGLFMPAAERYNIA 857 Query: 920 HALDRRVFHEFFQ--QAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLL 977 H +DR V + QA K K S+ LS + + V L+EQ+ +S LPP L Sbjct: 858 HLIDRYVVKGVIEWLQANKEAVEKLELCSINLSGQSMGNRDFVGFLIEQIRDSGLPPSKL 917 Query: 978 HL-IIPAEAILDHAESVQ---KLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELC 1033 L I AI + +E++Q +L+ GC I L G L F LK D + +DG Sbjct: 918 CLEITETAAIGNMSEAIQLFTQLKNLGCLIALDDFGSGLSSFGYLKRMPVDIIKIDGMFV 977 Query: 1034 ANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPL 1093 ++ + MD ++ I A+++G +T+A V ++ L +GVD G + +PL Sbjct: 978 RDIAEDEMDFAMVKAINELAKKMGKRTVAEFVENEAILMRLQSLGVDYAQGYLFGKPKPL 1037 Query: 1094 DLLV 1097 LV Sbjct: 1038 AELV 1041 >UniRef50_A1SU67 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Alteromonadales RepID=A1SU67_PSYIN Length = 1014 Score = 222 bits (566), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 223/855 (26%), Positives = 377/855 (44%), Gaps = 59/855 (6%) Query: 271 LPFLLILLPANIMTMVMYAFRAERKH----ISESETHFRNAMEYSAIGMALVGTEGQWLQ 326 LP LL+ + +++ R R + ESE FR+ + +IG+A+ WL+ Sbjct: 171 LPVLLLYPLITALLGMLFVQRLRRNQSTDALKESEFLFRSQFDLGSIGIAITYPGKGWLR 230 Query: 327 TNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGD 386 N LC+ LGY +EEL L + +LT P+D + DL Q +++++GE + YS++KR+ ++G+ Sbjct: 231 VNPRLCEILGYREEELLLLNWSELTHPDDRHLDLYQYDQMLTGEEDGYSLDKRFIRKDGE 290 Query: 387 VVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWE 446 V+ + +S R DG + IA I D +E K E + E++ +G W+W Sbjct: 291 SVYVHMTISCYR-VDGAVQFVIAGILDSSERKHAEDKIRGRKEQLLSVLSGSELGFWDWN 349 Query: 447 LKPNIFSWDKRMFEL--YEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSP-FKL 503 ++ N + R E+ Y I+ + + + V P D + + D L+ R+ K+ Sbjct: 350 IEANTVHRNARWAEMLGYRFED-IQNDTSINLDSVHPNDCGRVWQSVTDHLEGRTAQHKI 408 Query: 504 EFRITVKDGIRHIRALANRVLNKEGEVE---RLLGINMDMTEVKQLNEALFQEKERLHIT 560 E+R+ + G +++N GE + R+ G + D+T+ K E++ + + Sbjct: 409 EYRMRTRQGEYKWILDCAKIVNY-GEDQQPLRMSGTHTDITKRKLAEESM----QLASMV 463 Query: 561 LDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYS 620 + EA+ D I NP +M+G++ +E G + ++ + + + + Sbjct: 464 YQNSREAMTVTDSNGNIITTNPAFTEMTGYSADEITGKSHTFI--VSKQQDKRVYQRMEL 521 Query: 621 ADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSY 680 A S +V ++G +Y I + D S V D+TE +K + + Sbjct: 522 ALNSTGHWRGEVSCRHKNGENYMALLGINSIYNEDRSVHRRVAQFSDITERKKSEKIIWK 581 Query: 681 SASHDALTHLANRASFEKQLRILLQTVNSTHQRH---ALVFIDLDRFKAVNDSAGHAAGD 737 A+ D LT L+NR F Q LL N +R L+F+DLDRFKAVND+ GH GD Sbjct: 582 QANFDNLTGLSNRQMFHDQ---LLHEKNKAQRRGLNVGLLFLDLDRFKAVNDTLGHNMGD 638 Query: 738 ALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWE 796 LL ++A + + +R D+++R GGDEF +++ N +S +A +I+ + + + E Sbjct: 639 QLLIDVAQRLRNCVRKRDLVSRFGGDEFTVIIGGLKNTQSVERVAQKILCELAEPFLLGE 698 Query: 797 GRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAA 856 V+ + S GIT + ++ AD A Y++K GR Y ER Sbjct: 699 QNVY-ITPSIGITFYPKDGEATEMLLKNADQAMYSAKEKGRN-CYHYFTNSMQEQVERGG 756 Query: 857 MSLDEQWRMIKENQLMM-----LAHGVASPRIPEARNLWLISLKLWSCEGEII---DEQT 908 ++ +K+NQL + +A G R EA W E I +E Sbjct: 757 QLANDLRYALKKNQLELYYQPIVALGTGQIRKAEALIRWHHPELGMVSPAEFIPIAEETG 816 Query: 909 FRRSFSDPALSHALD-----RRVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLVNDL 963 D A D RR + FQ +SI+ V + + Sbjct: 817 TIVEIGDWVFRQAADQVAHWRREYQNDFQ----------VSINKS-PVQFREGGSDITSW 865 Query: 964 LEQLENSPLPPRLLHLIIPAEAILDHAES--VQKL---RLAGCRIVLSQVGRDLQIFNSL 1018 LE L LP + + + I +LD + + KL R +G + L G + L Sbjct: 866 LEHLLALGLPGQAVVIEITEGLLLDGSSRIVIDKLLAFRDSGIEVSLDDFGTGYSSMSYL 925 Query: 1019 KANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIG 1078 + D L +D N++ + D +L I A +LGM+ IA + LS G Sbjct: 926 RKFHIDNLKIDQSFVRNLKVDSDDMILCEAIIIMAHKLGMQVIAEGIENEEQRRLLSAAG 985 Query: 1079 VDLIYGEVIADAQPL 1093 D YG+ A+PL Sbjct: 986 CD--YGQGYLFAKPL 998 >UniRef50_A6F7G4 PAS sensor diguanylate cyclase and phophodiesterase n=2 Tax=Moritella sp. PE36 RepID=A6F7G4_9GAMM Length = 911 Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 161/584 (27%), Positives = 280/584 (47%), Gaps = 27/584 (4%) Query: 528 GEVERLLGINMDMTEVKQLNEALFQEKERL-HITLDSIGEAVVCIDMAMKITFMNPVAEK 586 GE++ +G+ D+T ++Q N A ++ R+ +LD I + + I ++NP + Sbjct: 335 GEIDGGVGVCDDIT-LQQQNTANLKKLSRVVECSLDGI----MITNTQGVIEYVNPSFTQ 389 Query: 587 MSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHY 646 ++G++ E++G T N E ++++ ++ +V ++G Y Sbjct: 390 ITGYSSTESVGEKS-NFFRSTTTTNATYNE-LWNSISNGDEWSDEVQNQHKNGDLYWAKV 447 Query: 647 SITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQT 706 +I P++ G + + D+T+SR + +Q++Y A HD LT L NR FE QL + + Sbjct: 448 TIIPMTNACGEITHFIGIQVDITKSRIISKQIAYQAKHDMLTGLINRYEFEHQLSDAVCS 507 Query: 707 VNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFG 766 V + H L F+DLD+FK +ND+ GHAAGD LLR++A L+ L+ +D LARLGGDEF Sbjct: 508 VQGSQLTHVLCFLDLDQFKIINDTCGHAAGDELLRQIAGLIGDNLKPNDTLARLGGDEFA 567 Query: 767 LLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQAD 826 +L+ DC + A A I+ V + FIW+ VG S G+ I + + +EV+ AD Sbjct: 568 VLMRDCQLTEAVVAANEILDKVKKFQFIWKKSCFSVGVSIGVAEICNTSGNTSEVLIHAD 627 Query: 827 IACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWR-------MIKENQLMMLAHGVA 879 +ACYA+K+ GR RV Y ++ + D+++R + E++ + A + Sbjct: 628 LACYAAKDLGRNRVHTYHD------NDELLTARDDEFRWVNEIKEALNEDRFELYAQPIV 681 Query: 880 SPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQ--QAAKA 937 + + + ++ + L++ G +I F LS +DR V Q +A Sbjct: 682 ALQDTAQKPIFEVLLRMQDKNGALISPGVFLPIAERYNLSEPIDRWVIDRTLQWMKAHSQ 741 Query: 938 VASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----V 993 IS+ LS A L + L+ ++ + + + P+ + I A + + S + Sbjct: 742 QLDMFDHISINLSGASLGDSDLLQHIMTTITQAKVSPQQIMFEITETAAISNLASATIFI 801 Query: 994 QKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHA 1053 L GC+ L G L F LK + L +DG ++ N +D ++ I Sbjct: 802 NTLSTFGCQFALDDFGSGLSSFAYLKNLPVNTLKIDGIFIKDILTNPIDAAMVKSINEIG 861 Query: 1054 QRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 + +KTIA V + + IG+D G I QP+D ++ Sbjct: 862 HLMKLKTIAEFVENDAIKQKVETIGIDFAQGYGIGKPQPIDKML 905 >UniRef50_B5JU45 PAS sensor diguanylate cyclase and phophodiesterase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JU45_9GAMM Length = 787 Score = 219 bits (557), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 163/563 (28%), Positives = 266/563 (47%), Gaps = 26/563 (4%) Query: 548 EALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHI- 606 +AL +KE+ +TL++I + V+ D +IT++NP+A ++GW E A+G L V I Sbjct: 218 QALDTQKEQSLVTLEAIADGVISTDEQDRITYINPIAAYLTGWPVERAMGRSLSEVFMIF 277 Query: 607 ---TFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVL 663 T G ++N ++ +L G + + I+ + + + G V+ Sbjct: 278 DEYTHEPQGNFLDNCLKEGANKPIGHH--ILLSYDGREIIIEHHISIIRGHENAVRGLVV 335 Query: 664 VIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILL-QTVNSTHQRHALVFIDLD 722 V DVT R++ QL Y A+HD L+ L NR FE QL+ L+ Q ++ H H L ID++ Sbjct: 336 VFHDVTVERELTTQLRYQATHDPLSDLLNRHEFEHQLQQLVSQPIDKQH--HVLCTIDIN 393 Query: 723 RFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIAT 782 +FK +ND+ GH AGD L+R+ A L+ D+ RLGGDEFG+L+ N E A Sbjct: 394 QFKVINDTCGHNAGDELIRQFADLIRDDALERDITGRLGGDEFGILIIGTNTEDAVARIK 453 Query: 783 RIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTV 842 ++ ++D+HF WE + + + G+ ID N A++M+ AD A A+K GR R+ V Sbjct: 454 KLRERISDFHFNWEDKSFSISVAIGVVEIDGNTDYLADLMNDADAARQAAKEKGRNRIHV 513 Query: 843 YEPQQAAAHSERAAMSLDEQWR-----MIKENQLMMLAHGVASPRIPEARNLWLISLKLW 897 Y+P R M +W I +N+ ++ + + E + I L+ Sbjct: 514 YQPDDHELMRRRGEM----RWAAYLNGAIADNRFLLTRQTILPLQEHEKGQHYEILLRCL 569 Query: 898 SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEF---FQQAAKAVASKGISISLPLSVAGL 954 G+I F + L +DR V F+ A+ + ++S+ LS + Sbjct: 570 DESGKISSAGDFLNAAERYNLISEIDRWVVRHLVTWFESTPTAMEATH-TVSINLSARSI 628 Query: 955 SSATLVNDLLEQLENSP-LPPRLLHLIIPAEAI--LDHAES-VQKLRLAGCRIVLSQVGR 1010 + DL E + P L ++ I AI + A+S + +R GC L G+ Sbjct: 629 IDSRFTQDLREMMLRMPGLAKKVCFEITETAAIANFNQAKSFIVAMRALGCSFALDDFGK 688 Query: 1011 DLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLV 1070 + + LK DYL +DG+ ++ + +D ++ I A +GMKTIA + Sbjct: 689 GMSSLSYLKQLPVDYLKIDGDFVRDLLSDPIDRAMVEHINQIAHMIGMKTIAEYAENHEI 748 Query: 1071 MDTLSGIGVDLIYGEVIADAQPL 1093 + L IGVD G I P+ Sbjct: 749 IQVLREIGVDYAQGYGIDRPHPI 771 >UniRef50_B8GPR3 Signal transduction protein n=2 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GPR3_THISH Length = 571 Score = 215 bits (547), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 144/433 (33%), Positives = 218/433 (50%), Gaps = 11/433 (2%) Query: 670 ESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQR-HALVFIDLDRFKAVN 728 ++R+ +++ A HD+LT L NR FE +L+ L + QR AL++IDLD+FK VN Sbjct: 134 QNRQAQEAINHLALHDSLTGLINRHGFETRLKEAL--AKARRQRPSALLYIDLDQFKLVN 191 Query: 729 DSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAV 788 D+ GH AGD LLR+LASL+ +R D LARLGGDEFG+LL +C +E A +A R++S V Sbjct: 192 DTCGHQAGDDLLRQLASLLQIPVREHDTLARLGGDEFGVLLDECTLEQAEQVARRMLSIV 251 Query: 789 NDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQA 848 ND+ + W R+GAS G+TL+DD + ++VM AD+ACYA+K+ GR RV ++ Sbjct: 252 NDFRYTWGEHNFRIGASIGLTLLDDPDLSLSDVMRHADMACYAAKDKGRNRVHLFREDDR 311 Query: 849 AAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQT 908 + + M + E +L + P P+ I L++ GE+I Sbjct: 312 TLMARHSEMQWTARINEALEQDRFLLYYQEIHPLKPDTAGHCEILLRMLDPSGEVISPWA 371 Query: 909 FRRSFSDPALSHALDRRVFH----EFFQQAAKAVASKGISISLPLSVAGLSSATLVNDLL 964 F + L +DR+V Q + KG + LS L + + Sbjct: 372 FIPAAERYNLMPTVDRKVLELTLPRIRQLLREGQVPKGYRWFINLSGLTLGDDAFLAHVT 431 Query: 965 EQLENSPLPPRLLHLIIPAEAIL----DHAESVQKLRLAGCRIVLSQVGRDLQIFNSLKA 1020 E+L +PP L I A++ + +Q++R GC + L G L F+ L Sbjct: 432 ERLREHAIPPEALGFEITETAVIANLGNAVRFIQRMRDLGCHVALDDFGTGLSSFSYLSN 491 Query: 1021 NMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVD 1080 ADY+ +DG ++ N M + ++ I G++TIA V V L+ +GVD Sbjct: 492 IPADYIKIDGGFVRDMHENEMHQAIVEAINRIGHVAGLRTIAEFVETEGVRQRLAQLGVD 551 Query: 1081 LIYGEVIADAQPL 1093 G IA +PL Sbjct: 552 YAQGYGIARPRPL 564 >UniRef50_Q07XP4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q07XP4_SHEFN Length = 829 Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 182/672 (27%), Positives = 331/672 (49%), Gaps = 52/672 (7%) Query: 417 LKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWY 476 +K E++ QQL+ ++ + I W+ +L N+FS D N +W+ Sbjct: 137 IKAKEEL-QQLVNQVPML-----ITYWD-DLGQNLFSND---------------NTGLWF 174 Query: 477 ECVLPE-DRQHAEKVIRDSLQSR--------SPFKLEFRITVKD--GIRHIRALANRVLN 525 + ++ + +H + ++L + + L++ +TV G+ +++ + Sbjct: 175 DSLVGDVKNKHISTIFPEALSNAILNHHRHITSDALKYIVTVPQSVGLSFYEVFQSKMKS 234 Query: 526 KEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAE 585 G V+ L +D++EVK +AL+ EKERL +TL+SIG+AV+ D ITFMNP+AE Sbjct: 235 SAG-VDGYLVTVVDVSEVKHAKQALYSEKERLRVTLNSIGDAVIATDTRGLITFMNPIAE 293 Query: 586 KMSGWTQEEALGVPLLTVLHITFGDNG-PLMENIYSA--DTSRSAIEQDVVLHCRSGGSY 642 +M+GW ++AL + V+H+ D PL+ +Y A + A+ + +L R G + Sbjct: 294 RMTGWRLKDALHQKIEDVMHLKDSDTQQPLLNPLYLALREQRIVAMALNSLLTSRGGHVF 353 Query: 643 DVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRI 702 V S P+ +G IG+++V DV+E+ M ++S+ A+HD LT L NR + +L + Sbjct: 354 YVEDSAAPIRNENGEMIGAIMVFHDVSEAMAMAMKMSHLANHDQLTDLPNRILLQDRLSV 413 Query: 703 LLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGG 762 T S + A + ID+D FK +NDS GH GD L+ +A + S++ +S LARLGG Sbjct: 414 ACSTARSYGTKAAALLIDIDHFKFLNDSLGHQYGDELICMMARRLRSLIPASYTLARLGG 473 Query: 763 DEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEV 821 DEF +L+ + +VE++ +A+ ++ A+++ F+ + + V S G+++ ++ A E+ Sbjct: 474 DEFVILMSETRSVEASSQLASTLVEAMHE-PFVLDNQKFNVSISIGVSVFPNDAVDAEEL 532 Query: 822 MSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASP 881 M AD+A Y +K GR R + ++ ER + + +I + + H P Sbjct: 533 MRHADVAMYRAKQEGRNRFCFFSHDLESSLMERHHLETRLRKALINDE---LFVH--YQP 587 Query: 882 RIPEARNLWLIS---LKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV 938 +I N+ + + ++L + EGE+I F + L L ++V ++ +A + + Sbjct: 588 KIDLQTNIIIGAEALVRLANDEGELISPAEFIPLAEESGLIIMLGKQVLNKACAEAKRWL 647 Query: 939 A-SKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQ--- 994 I IS+ ++ A + L + + L + LP LL L I A++ A +Q Sbjct: 648 EMGHTIPISVNVAAAQFADPDLAGMIKKALLDHNLPAHLLELEITETALMIDAADMQNKL 707 Query: 995 -KLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHA 1053 +L G +I + G LK D + +D ++ N D ++ I Sbjct: 708 SELISLGIKIAIDDFGTGYSSLAYLKKFNVDVMKIDMSFVKDMLNNKHDYEIVKTIISLG 767 Query: 1054 QRLGMKTIAGPV 1065 + +G+ IA V Sbjct: 768 KSMGLVLIAEGV 779 >UniRef50_B8HP72 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HP72_CYAP4 Length = 820 Score = 213 bits (541), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 145/460 (31%), Positives = 218/460 (47%), Gaps = 47/460 (10%) Query: 680 YSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDAL 739 + A+HD LT L NR SFE+ LR T Q H L +DLDRFK VND++GHAAGD L Sbjct: 362 WQANHDPLTELPNRRSFEQTLRASFTQSQRTQQEHVLCLVDLDRFKLVNDTSGHAAGDEL 421 Query: 740 LRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRV 799 L++++ L+ + +R +DV+ARLGGDEFG++ C++++A+ +A ++ S++ + F+W+ RV Sbjct: 422 LKQISLLLKTQIRQTDVVARLGGDEFGIIFYHCSLDAAQRLAQKLQSSLATFRFVWQDRV 481 Query: 800 HRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSL 859 VGAS G+ I + AEVM+ AD+ACY +K G RV ++ A S+ + Sbjct: 482 FTVGASLGLAQISAHVADLAEVMTAADLACYTAKKQGGNRVHIHRIGSQALASQLGEVHW 541 Query: 860 DEQWRMIKENQLMML---------------AHGVASPRIPEARNLWLIS----------- 893 Q R EN L G P + E R I Sbjct: 542 AVQLRQAIENNRFCLYSQPIVPINRCSCQTVSGTLDPTV-EPREATPIGATNPAACTSQS 600 Query: 894 ---------LKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQ-------AAKA 937 L L+ ++ID F L +DR H F AA Sbjct: 601 QPYLCQEVLLHLYDETNQVIDPNVFLPIAEQYGLITVIDRWAIHNLFAYIQAQHYPAATL 660 Query: 938 VASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SV 993 +++G ++ LS L A+ + LLEQL +PP + I A + + + + Sbjct: 661 DSARGYRYAINLSGRTLDDASFADFLLEQLAAYQVPPAAICFEITETAAIANLKLAMPFI 720 Query: 994 QKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHA 1053 Q L+ AGC L G + F LK DYL +DG L ++ N ++ ++ I A Sbjct: 721 QTLKAAGCLFALDDFGGGMSSFAYLKNLPVDYLKIDGTLIKDLSNNPVNYYIVQAINDIA 780 Query: 1054 QRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPL 1093 +G++TIA V + ++S IG+D G IA PL Sbjct: 781 HTMGIQTIAEGVDSLDTLSSVSQIGIDFAQGHYIAQPVPL 820 >UniRef50_C5BTR2 PAS sensor diguanylate cyclase/phophodiesterase n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BTR2_TERTT Length = 1416 Score = 212 bits (540), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 161/588 (27%), Positives = 276/588 (46%), Gaps = 24/588 (4%) Query: 536 INMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEA 595 I DMT + + EAL EK + TL+ + E V+ ++ + ++NP A K+ + +E Sbjct: 831 IFYDMTNLTRSKEALAFEKFQAQKTLELVAEGVIRLNTRGTVEYINPAALKILCKSHDEI 890 Query: 596 LGVPLLTVLHITFGDNGPL-----MENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITP 650 L + + + G ++ ++ S +++H S + + SI P Sbjct: 891 AFQRLASEISLYDEVGGSFSLEQFVQRCLQSNESFVVENNPLLIHTGSETANYIELSIVP 950 Query: 651 LSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNST 710 L D G ++ ++D +E + L +L + ++HD+LT L NR EK+L + T Sbjct: 951 LQLSDDVR-GCIITLRDTSERHRQLERLKWQSTHDSLTGLVNREEMEKRLERAIATSRRE 1009 Query: 711 HQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLP 770 +L+++DLD+FK +ND+ GH AGD LL++LA L+ MLR+ D ARLGGDEF +LL Sbjct: 1010 GIESSLLYMDLDQFKVINDTCGHLAGDQLLKQLAQLIRDMLRTRDTFARLGGDEFAILLD 1069 Query: 771 DCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACY 830 C + A IA +I V DY F WE + RVG S GI I + Q ++V+S AD ACY Sbjct: 1070 HCPILEAEAIAQKIKQKVCDYRFAWEDKAFRVGVSIGIVGIHPSVSQLSQVLSDADAACY 1129 Query: 831 ASKNGGRGRVTVYEPQQAAAHSERAAM-SLDEQWRMIKENQLMML---AHGVASPRIPEA 886 A+K GR + ++ ++R M S+ + + I+ + + H V S I Sbjct: 1130 AAKEAGRNCIQIHTQDNKVLEAQRLQMRSISDINQAIESDHFRLYFQQIHAVGSGAIQS- 1188 Query: 887 RNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISIS 946 W I +++++ GE + F + L + +D V + A+ +G Sbjct: 1189 ---WEILIRMFNATGEFLLPSHFLPAAERFGLINRIDTWVMESALRNVAQYFG-QGKERD 1244 Query: 947 LPLSVAGLSSATLVN----DLLEQL-ENSPLPPRLLHLIIPAEAILDH----AESVQKLR 997 PL +S AT+ + DL+ +L P + I +++ + +E +++ R Sbjct: 1245 FPLLSFNVSGATISDPAYLDLVSELFTRYQYPANKISFEITETSVVRNLVKASEFMRRAR 1304 Query: 998 LAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLG 1057 GC++ L G L + L D + +D N+ N ++ ++ ++ A L Sbjct: 1305 ELGCKLALDDFGTGLSSLSYLGELPVDRVKIDMSFVKNIVDNPVNRAIVNSVKEVAHLLK 1364 Query: 1058 MKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNSSYFAIN 1105 ++ +A V P + L +GVD G + P + V S IN Sbjct: 1365 LEVVAEGVETPAQLACLRELGVDAYQGFLAGKPLPFEEFVCRSLDTIN 1412 >UniRef50_B0BZ23 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0BZ23_ACAM1 Length = 964 Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 158/564 (28%), Positives = 271/564 (48%), Gaps = 30/564 (5%) Query: 548 EALFQEKERLHITLDSIGEAVV-CIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHI 606 E +E ER + L +G + +D + +++++ + + +G PL V Sbjct: 404 EKTLRENERRYRDLAEVGANIFWELDENLNLSYVSDLQGHQPSAISSQIIGSPLTDV--- 460 Query: 607 TFGDNGPLMENIYSADTSRSAIE---------QDVVLHCRSGGSYDVHYSITPLSTLDGS 657 F D E I+ +T R +E +D + + + + +D + Sbjct: 461 -FAD-----EEIFEFNTKR--LETILHWRRPIRDFIFFAKEDNQEMRIFKLNGKPIVDDA 512 Query: 658 NI--GSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHA 715 + G + +D+TE + ++++Y A++D+LT+L NR+ F+ +L+ + ++ Sbjct: 513 QLFQGYRGIQRDITEEYFLTKKIAYQAAYDSLTNLLNRSEFDSRLQESVNLAKEDDTQYV 572 Query: 716 LVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE 775 L ++DLD+FK VND+AGH GD LL +LA L+ LR DVL RLGGDEFGLL+ DC +E Sbjct: 573 LCYLDLDQFKLVNDTAGHIVGDQLLTDLAHLLKQKLRPDDVLGRLGGDEFGLLMQDCTLE 632 Query: 776 SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNG 835 A+ ++++ V ++ F W RVG S GI D ++ A E++S+AD+ACY +K+ Sbjct: 633 EAQAFCEKLVTQVQNFRFQWRDSQFRVGVSVGIVAFADASYSAEELLSRADLACYKAKDS 692 Query: 836 GRGRVTV-YEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEA-RNLWLIS 893 GRGRV V + + H + + + + I+E +L ++ + S R P + + I Sbjct: 693 GRGRVYVANQNDRELDHFQLQMAHIADIPQAIEEERLFLVKQPIQSIRQPTSLHRHYEIL 752 Query: 894 LKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAG 953 L+L + II F + + +D V Q + + +S+ LS A Sbjct: 753 LRLRDGKNNIIGPGLFIPAAERYGVIALIDHWVLENTLDQYYQCGLEDEM-VSINLSGAS 811 Query: 954 LSSATLVNDLLEQLENSPLPPRLLHLIIPAEAI---LDHA-ESVQKLRLAGCRIVLSQVG 1009 ++ ++ + S +PP + + I A LD A ++ L+ G + L G Sbjct: 812 INDDRATAKVIALITQSSVPPSNICIEITETATIAQLDQALRFIESLKDIGVKFALDDFG 871 Query: 1010 RDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPL 1069 + + LK+ DYL +DG L N+ D +I +I A + GMKTIA V Sbjct: 872 SGVSSLSYLKSLPVDYLKIDGSLIKNIAVVESDREIIYLINELAHKRGMKTIAEFVENEQ 931 Query: 1070 VMDTLSGIGVDLIYGEVIADAQPL 1093 +++ L IGVD G I +PL Sbjct: 932 ILEQLRIIGVDYAQGYGIGKPEPL 955 >UniRef50_Q1YVI9 Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YVI9_9GAMM Length = 857 Score = 209 bits (531), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 159/593 (26%), Positives = 278/593 (46%), Gaps = 21/593 (3%) Query: 517 RALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMK 576 R L ++ + ++L+ + D T+V Q E L E +T I +AVV +D Sbjct: 267 RYLDIKLFYSAADQDQLIILCNDCTQVSQQAEELINRGELYDLTSKHIADAVVLVDAEGF 326 Query: 577 ITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNG----PLMENIYSADTSRSAIEQDV 632 + MNP+AE++ G +++ V + TV+ + D G P+ + + A S Q + Sbjct: 327 VLEMNPIAEQLLGLKLDKSKPVQIHTVMPLANEDTGIAETPVQDALNKALNVES--NQSL 384 Query: 633 VLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLAN 692 +L R V S PL G + +++ + ++E+R++ +L + + HD+LT L N Sbjct: 385 LLKVRGAAPVSVSVSAFPLRDAMGRIVKCLVIFRLLSEARRVSSRLQWQSMHDSLTGLPN 444 Query: 693 RASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLR 752 RAS K ++ ++ HAL++IDL F +ND++GH AGD LL+E A L++ + Sbjct: 445 RASLSKHIQKAVEIARHEGATHALLYIDLYNFSVINDTSGHTAGDELLKEFAQLLIRLAG 504 Query: 753 SSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLID 812 SD+ AR+G DEF LL+ N + +R +A RI++ V + WEG V ++GAS G LID Sbjct: 505 PSDITARIGNDEFALLIHRVNYDKSRMLAERILAEVKELRVPWEGEVLKIGASIGAILID 564 Query: 813 DNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLM 872 + ++M A +C +++ GR ++ + A A S+ + + E++ Sbjct: 565 NTALSDIDLMISAGSSCATARDKGRNKIHFQSFNEEVARRRSLATSMPKIVSALDEDRFT 624 Query: 873 MLAHGVASPRIP-----EARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVF 927 + A P +P + + +++ +G I+ F +L LD+ VF Sbjct: 625 LFAQ----PIVPLQGSATTAKCYEVLVRMRESDGTILPPSEFIPGAEHFSLIDDLDKWVF 680 Query: 928 -HEF-FQQAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEA 985 H F Q +A S +S+ LS + ++ +L ++ + P+ I A Sbjct: 681 SHSLKFLQRLQAQGSALPLLSVNLSGTTVGDENAIDYILRGFSDTGISPKQFQFEITETA 740 Query: 986 ILDHAESVQK----LRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLM 1041 + H + ++ LR G I L G L F LK D L +D ++ + + Sbjct: 741 AVKHLQEAKRLISTLRSVGVSIALDDFGSGLSSFAYLKELPIDCLKIDSSFIHTMENSDV 800 Query: 1042 DEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLD 1094 D +++ I +G+ T+A V + L IGVD + G + QPLD Sbjct: 801 DYSVVSTINHLGHIMGVTTVAEGVENENQLRLLKKIGVDYLQGFLFQHPQPLD 853 >UniRef50_A9KMR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KMR9_CLOPH Length = 799 Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 154/554 (27%), Positives = 260/554 (46%), Gaps = 40/554 (7%) Query: 554 KERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALG------VPLLTVLHIT 607 K L + +I +A+V D I +N +KM G+++EE +G P + I Sbjct: 250 KSYLRNVISNISDALVVADADFCIETVNEATKKMFGYSKEELVGSSVSIFFPQIQEQVIE 309 Query: 608 FGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQD 667 N + YS + +V++H + + V S T ++ + + V + +D Sbjct: 310 HWKNTIITHRQYS--------DYEVIIHTKEKNAIPVLISSTVMTEDNSGQVHFVCIAKD 361 Query: 668 VTESRKMLRQLSYSASHDALTHLANRASFEKQLR-----ILLQTVNSTHQRHALVFIDLD 722 ++E +K + Y A+HD LT L+NR + EK+++ ILL + +F+DLD Sbjct: 362 ISERKKSEESIRYQANHDMLTGLSNRYALEKEIQACSNMILLYP----EEMSMFLFLDLD 417 Query: 723 RFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIAT 782 +FK VND GH AGD L++ L +M LR D LAR+GGDEFG+LL + IA Sbjct: 418 KFKIVNDVCGHHAGDELIKHLTLMMKQNLREQDTLARIGGDEFGVLLNGISQVEGLEIAE 477 Query: 783 RIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTV 842 + V + F+WE +V +G S G +I+ + ++ ++V+S AD ACY SK G RV + Sbjct: 478 NLCETVKKFRFVWEEKVFTLGVSIGAVIINRDLYEVSKVISAADQACYISKENGGNRVQL 537 Query: 843 Y-EPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGV--ASPRIPEARNLWLISLKLWSC 899 + E +Q + E + + +EN+ +++ + S ++ + ++L Sbjct: 538 FSESEQEFSLREEEMQVMPSITKAFEENRFLLVYQDIVRVSDKVLSG---YEALIRLKDE 594 Query: 900 EGEIIDEQTFRRSFSDPALSHALDRRVFHEF-----FQQAAKAVASKGISISLPLSVAGL 954 +G+++ TF + +DR V F F Q ++ +S + Sbjct: 595 QGQLVSPGTFLPAAQRYNKLTDIDRWVITNFCKNYDFHQIGS--IENDFIYNINISATSI 652 Query: 955 SSATLVNDLLEQLENSPLPP-RLLHLIIPAEAI---LDHAESVQKLRLAGCRIVLSQVGR 1010 ++ + + Q E +PP R+ I A+ + E +Q+L+ GCR L G Sbjct: 653 NAEGFLEFICHQFEEHQVPPQRVCFEITETSAVSNFVKAKEFIQELKKLGCRFALDDFGS 712 Query: 1011 DLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLV 1070 L F LK DY+ +DG + ++ N +D L++ I A +GMKTIA V + Sbjct: 713 GLSSFTYLKYLPVDYIKIDGIIVNDIDTNKIDYALVSSINEIAHLMGMKTIAEYVENEDI 772 Query: 1071 MDTLSGIGVDLIYG 1084 + L IGVD G Sbjct: 773 FNCLREIGVDYAQG 786 >UniRef50_B8GLH4 Putative diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GLH4_THISH Length = 651 Score = 205 bits (521), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 120/306 (39%), Positives = 169/306 (55%), Gaps = 7/306 (2%) Query: 543 VKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLT 602 V +LN +L + L TL SIG+AVV D I +MNPVAE+M + + G Sbjct: 343 VMRLNRSLTASRVSLANTLRSIGDAVVTTDTQGLIQYMNPVAERMGHCSLPDVQGHDYRQ 402 Query: 603 VLHITFGDNGPLMENIYSADTSRSAIEQ-----DVVLHCRSGGSYDVHYSITPLSTLDGS 657 V H+ + + N+ A S S E D +L R G Y V + + + Sbjct: 403 VFHLVDESSRKELGNL--ARHSASMREPRPYTFDGLLLGRDGQEYSVKITTSTIRAGLSR 460 Query: 658 NIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALV 717 G VLVI DVTE R + RQL + A+HD LT L NR FE +L + + Q H L+ Sbjct: 461 VSGCVLVIHDVTELRTLARQLKFQAAHDPLTGLVNRREFETRLSRAVDGSQKSGQTHVLI 520 Query: 718 FIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESA 777 F+DLD FKA+ND+ GHAAGD +LRE+A ++ +RS+D AR+GGDEFG+LL +C +E+ Sbjct: 521 FLDLDWFKAINDTLGHAAGDQVLREVADMLERQVRSTDTAARIGGDEFGILLLNCELEAG 580 Query: 778 RFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGR 837 +A ++ A+ Y ++ G +RVG S G+ LID + ++ AD ACY +K GR Sbjct: 581 IAVAEKLRDAIAGYSYVSGGETYRVGVSQGLVLIDRQSGNLGAILKAADEACYTAKEHGR 640 Query: 838 GRVTVY 843 R VY Sbjct: 641 NRYHVY 646 >UniRef50_A8FQD1 Sensory box protein n=15 Tax=Shewanella RepID=A8FQD1_SHESH Length = 870 Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 156/556 (28%), Positives = 266/556 (47%), Gaps = 18/556 (3%) Query: 550 LFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFG 609 +FQ+KER TL+SI EAV+ D+ K+ ++NP AE++ G E A+GV + +++ Sbjct: 304 IFQQKERFKTTLESIAEAVILTDIGAKVVYLNPQAERLLGVKGESAIGVSVDSLVKTDKS 363 Query: 610 DNGPLMENIYSADTSRSAIEQDVV--LHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQD 667 L E ++S +Q V+ L ++ + + SI+ L IG+V+V++D Sbjct: 364 IKDDLFEFMFSQ------AQQPVLSKLKLKTDKTRILERSISNLLNQQRIVIGTVIVLRD 417 Query: 668 VTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAV 727 +T + RQL A+ D++T L NR +FE++L + + Q A+ + DL++FK + Sbjct: 418 ITREELLKRQLRQKANFDSITSLLNRRAFEERL----EKFSHDAQSIAICYFDLEQFKLI 473 Query: 728 NDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISA 787 NDS GH+AGD +L +A M S L ++LARLGGDEFGL + D N + RI+S+ Sbjct: 474 NDSCGHSAGDTMLAMVAKAMQSCLSKDEMLARLGGDEFGLAIRDHNASEVAQLVKRIVSS 533 Query: 788 VNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQ 847 V+ G ++VG SAG+ + E++ AD+AC A+K G +V Y+ Sbjct: 534 VSMQVLRDNGCHYKVGVSAGVAIARAPYISPKELIKDADVACIAAKRKGSNQVHFYDDND 593 Query: 848 AAAHSER-AAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDE 906 + +R A M + I+ N+L++ + E + I L++ G I+ Sbjct: 594 KESIYQRNAPMWAVRIGQAIEHNELLLYYQPIKGMGPGEHKQRMEILLRIQEPCGRILSP 653 Query: 907 QTFRRSFSDPALSHALDRRVFHE-FFQQAAKAVASKGISISLPLSVAGLSSATLVNDLLE 965 F + L + +D+ V + F + IS+ LS L + +V + E Sbjct: 654 AQFIEAAERFKLMNDVDKEVIRKAFLWLSLHEEIWDDHCISINLSGNSLGAEGMVEYIAE 713 Query: 966 QLENSPLPPRLLHL-IIPAEAILDHAES---VQKLRLAGCRIVLSQVGRDLQIFNSLKAN 1021 Q + +P + + I AI + + + LR G L G + LK Sbjct: 714 QFKRFEIPSKCICFEITETSAIQNRNRAMDMLNYLRKLGFSFALDDFGTGFASYGYLKEL 773 Query: 1022 MADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDL 1081 DY+ +DG ++ N D ++ I +G++T+A V ++D L IG++ Sbjct: 774 PVDYVKIDGCFVKSLATNAKDFAIVKSIHDVCDVMGIETVAEFVENQDIIDRLEDIGINY 833 Query: 1082 IYGEVIADAQPLDLLV 1097 G I +PL+ + Sbjct: 834 AQGYAIGRPKPLETYI 849 >UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAD3_METSD Length = 751 Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 170/583 (29%), Positives = 270/583 (46%), Gaps = 29/583 (4%) Query: 529 EVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMS 588 E+ RLL + +D+ ++ + L+ EK+R +TL SIG+ V+ D ++ ++NPVAE+M+ Sbjct: 168 EINRLLKLEIDLR--REAEQTLYAEKQRAVVTLQSIGDGVITTDKQSRVNYLNPVAERMT 225 Query: 589 GWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAI---EQDVVLHCRSGGSYDVH 645 GW+ EA G PLL V I + L+ N I L R G Y + Sbjct: 226 GWSNAEAQGKPLLEVFRIVNESSRKLVPNPVDVVLQHGEIYGLANHTALIGRHGNEYAIE 285 Query: 646 YSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQ 705 S P+ DG+ +G VLV DV+E+R M +++Y A HD LT L NR +L L Sbjct: 286 DSAAPIRDQDGNVLGVVLVFHDVSEARNMANKMTYLAEHDYLTGLPNRLLLNDRLNQALT 345 Query: 706 TVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEF 765 + AL+F+DLD FK +NDS GH GD LL+ +A + S LR+SD ++R GGDEF Sbjct: 346 IARRDQEFIALMFLDLDHFKNINDSLGHEVGDQLLKMVARRLESCLRASDTISRQGGDEF 405 Query: 766 GLLLPD-CNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQ 824 +LLP+ N S +A ++++A + I + V AS GI + D+ + Sbjct: 406 MILLPELTNYFSPAEVAEKLLAAATVPYEIGSHEI-TVSASIGIAVFPDDGENGELLTKN 464 Query: 825 ADIACYASKNGGRGRVTVYEPQQAAAHSERAA--MSLDEQWRMIKENQLMMLAHGVASPR 882 AD A Y +K+ GR + A +ER L+ + R E +L + P+ Sbjct: 465 ADAAMYHAKSLGRNNYQFF----TRAMNERVMEIAELESKLRRAVERNEFVLYY---QPK 517 Query: 883 IPEARNLWLI---SLKLWSCEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAA--K 936 I + R ++ +L W ++ F D L + V E +Q + Sbjct: 518 I-DIRTGQVVGAEALIRWQHPSWGLVAPDRFIPIAEDSGLIRPIGLWVMREACRQNQEWQ 576 Query: 937 AVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES---- 992 A I +++ LS L + ++ E L S L P L L + E++ HAE+ Sbjct: 577 AAGLARIPVAVNLSTVQLRQHNFLQEVSEILLMSGLEPDYLELEV-TESVAIHAETEVIN 635 Query: 993 -VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQG 1051 + KLR G ++ L G + LK + + +D +++ + D +IT I Sbjct: 636 WLHKLRSMGVKLALDDFGTGYSSLSYLKRLPINNVKIDKSFIRDIETDPDDATIITAIIR 695 Query: 1052 HAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLD 1094 + L + IA V ++ L G D + G + + P D Sbjct: 696 MSHGLRLNVIAEGVENINQLEFLKKEGCDQMQGFIASRPVPAD 738 >UniRef50_Q2SJ14 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=2 Tax=Gammaproteobacteria RepID=Q2SJ14_HAHCH Length = 559 Score = 201 bits (512), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 165/521 (31%), Positives = 251/521 (48%), Gaps = 35/521 (6%) Query: 587 MSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHY 646 M G++ EEAL V L + P++ I S I +DV + G++D Sbjct: 60 MPGFSSEEALAVVREAELDV------PVI--IVSG-----TIGEDVAVRAMKAGAHDYIM 106 Query: 647 SITPLSTLDGSNIGSVLVIQDVTESRKML-RQLSYSASHDALTHLANRASFEKQLRILLQ 705 L I L V ++RK R L + A HD+LT L NR FE++L+ L Sbjct: 107 KDNLARLLPA--IQRELKEATVRDARKRAERTLHHMAYHDSLTDLVNRREFERRLKSALN 164 Query: 706 TVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEF 765 + H L+++DLD+FK +ND+ GH AGD LL++LA L+ +R SD LARLGGDEF Sbjct: 165 SSKERGLTHMLLYLDLDQFKIINDTCGHVAGDELLKQLAILLSKHIRESDTLARLGGDEF 224 Query: 766 GLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQA 825 G+LL C A +A + S V ++ F+W+ + + S GI + AE++S A Sbjct: 225 GILLESCAERRAIQLAQELNSEVRNFRFVWQQKPFTISLSIGIVAVTSEYGSGAEILSHA 284 Query: 826 DIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRM-IKENQLMMLAHGVASPRIP 884 DIACYA+K+ GR + VY+ R M + R+ ++EN+ + + RI Sbjct: 285 DIACYAAKDKGRNTIQVYQSDDVEMMRRRTEMQWISRIRIALEENRFFLYQQPM--ERIG 342 Query: 885 EARNLWLIS---LKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQ---QAAKAV 938 R L + L+L + E+I F + +L +DRRV FQ ++ K + Sbjct: 343 PDRGAGLHTEFLLRLREGD-EVIPPGAFIPAAERYSLMPLIDRRVIELVFQYLAESGKGM 401 Query: 939 ASKGISISLPLSVAGLSSATLVNDLLEQLENSPL-PPRLLHLIIPAEAILDHAESVQ--- 994 A KG + + LS A LS + D+ + L + P R+ I AI AE+V+ Sbjct: 402 ADKG-AYFINLSGASLSDDKVFEDIRKNLRKYKIRPERICFEITETAAIAHLAETVEFIR 460 Query: 995 KLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQ--GH 1052 ++R G + L G + F+ LK DYL +DG N+ + +D ++ GH Sbjct: 461 EIREEGFKFALDDFGCGMSSFSYLKTIPVDYLKIDGSFVRNMLSDPIDVGIVEACNRIGH 520 Query: 1053 AQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPL 1093 A G+ TIA V + + L IGVD G ++ +PL Sbjct: 521 AA--GLTTIAEFVENEQIKEKLIEIGVDYAQGFAVSKPKPL 559 >UniRef50_Q3SIB5 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SIB5_THIDA Length = 698 Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 150/437 (34%), Positives = 220/437 (50%), Gaps = 22/437 (5%) Query: 677 QLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAG 736 +L Y ASHDALT L NR FE++L + + HAL ++DLD+FK +NDS GHAAG Sbjct: 265 RLVYQASHDALTGLINRREFEQRLERARMSALEQGREHALCYMDLDQFKVINDSCGHAAG 324 Query: 737 DALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWE 796 D LLR+LA L+ LR D LARLGGDEF LLL +C+++ A +A S V + F W Sbjct: 325 DELLRQLALLLKGKLRERDTLARLGGDEFALLLENCSIDDALEVADAFRSEVQRFRFKWG 384 Query: 797 GRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAA 856 R+ VG S G+ ID ++ AA +MS AD ACY +K+ GR ++ +YE + + R Sbjct: 385 DRIFAVGMSVGMVAIDADSGTAAGLMSAADAACYVAKDRGRNQIHLYESRDSDLVRHRGE 444 Query: 857 MSLDEQW-----RMIKENQLMM----LAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQ 907 M QW R ++EN+L + + A+P P R++ L+ L++ +G I Sbjct: 445 M----QWVTRIQRALEENRLSLSWQEIRRTDAAPE-PGTRHVELL-LRMIDDDGGEILPM 498 Query: 908 TFRRSFSDPALSHALDRRVFHE---FFQQAAKAVASKGISISLPLSVAGLSSATLVNDLL 964 F + ++ ALD V E ++ K+ ++ LS A L T LL Sbjct: 499 AFIPAAERYSIMPALDAWVVEETLRLCKRYLKSTCEVHCLFAVNLSGASLKDPTFRKTLL 558 Query: 965 EQLENSP-LPPRLLHLIIPAEAILDHA---ESVQKLRLAGCRIVLSQVGRDLQIFNSLKA 1020 QL+ +P L P L I AI + + +R GC L G L F LK Sbjct: 559 AQLQQNPELGPHLCFEITETAAIGNLGVVNGFIDAMRGFGCSFALDDFGSGLSSFTYLKN 618 Query: 1021 NMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVD 1080 DYL +DG ++ N +D ++ I ++G++T+A V ++ L IGVD Sbjct: 619 LRVDYLKIDGAFVRDIATNAIDRSMVEAIHRIGHQMGLQTVAEYVESEEILSLLREIGVD 678 Query: 1081 LIYGEVIADAQPLDLLV 1097 G + +P+D L Sbjct: 679 YAQGSAVRRPEPIDTLC 695 >UniRef50_A4TKF0 Diguanylate cyclase with PAS/PAC sensor n=31 Tax=Yersinia RepID=A4TKF0_YERPP Length = 693 Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 162/575 (28%), Positives = 279/575 (48%), Gaps = 46/575 (8%) Query: 297 ISESETHFRNAM-EYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPED 355 + +SE FR+ + E + ++ T G+ L NK + GY++EE+ G F L ED Sbjct: 134 LRKSEELFRHLISEVEDCAIYMIDTAGRILTWNKGGERHEGYTREEIIGEHFTLLFTQED 193 Query: 356 LNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDIN 415 ++ + + + + E + +N WA +A+S + G L F + D+ Sbjct: 194 ISAGVPEKSLAKAVAEGNFQTEGWHVRKNNIRYWASVAISPIHDDQGNLLGFTKIVRDLT 253 Query: 416 ELKRTEQVNQQLMERITLANEA------------GGIGIWEWELKPNIFSWDKRMFELYE 463 E + E+ + ER L ++ G + W + I + Sbjct: 254 ERHQREETLRISEERFRLMVDSVEDYAILMLDPWGRVNTWNHGAQHKIGYASNEI----- 308 Query: 464 IPPHIKPNWQVWYECV-LPEDRQHA--EKVIRDSLQSRSPFKLEFRITVKDGIRH-IRAL 519 I H + C+ LPED K+++ + S S + E + KD R+ + Sbjct: 309 IGQH--------FGCLFLPEDLVAGLPGKLLK-TAASASRIEYEGWLVRKDITRYWALTV 359 Query: 520 ANRVLNKEGEVERLLGINMDMTEVKQLNEAL-------FQEKERLHITLDSIGEAVVCID 572 + + G++ + D++E KQ +AL ++E+E+LH L SI + ++ ++ Sbjct: 360 ITAIHDHNGKLLGYTKLIRDISERKQREDALRASEAARYEEREQLHQVLSSIPDGIISLN 419 Query: 573 MAMKITFMNPVAEKMSGWTQEEALGVPL--LTVLHITFGDNGPLMENIYS---ADTSRSA 627 ++ MNP AE+M+G Q E+ G+P+ + +L D L +S A+ ++ Sbjct: 420 SEGRVVLMNPKAEEMTGCRQNESCGLPIEEVFILWSPLQDKNQL--EAFSQCLAEGRQTL 477 Query: 628 IEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDAL 687 + + L R G ++ S +P+ D G+V+V QDVT +R R L Y ASHD L Sbjct: 478 LPEGHYLVSRWGERQEIRCSASPIRDRDNIVTGAVVVFQDVTRARHEQRALQYQASHDML 537 Query: 688 THLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLM 747 T L NR E++L + + + Q H L ++DLD FK VND+AGH AGD +LR +A M Sbjct: 538 TGLINRRRLEERLTLAINQLAHDGQ-HILCYVDLDYFKDVNDNAGHEAGDMVLRMVAQTM 596 Query: 748 LSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAG 807 +R +D++ARLGGDEF ++L +C +SA I ++++ + F W G+ + + AS G Sbjct: 597 QQAVRENDIVARLGGDEFAIVLFNCPSKSAAEILEQVVADIAAIQFHWHGQSYVLTASLG 656 Query: 808 ITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTV 842 + A++ M ADIACY +K+ GR ++++ Sbjct: 657 AIPLTQQTESASQAMRLADIACYKAKHAGRNQLSL 691 >UniRef50_D0I367 Sensory box/GGDEF family protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I367_VIBHO Length = 1043 Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 156/541 (28%), Positives = 267/541 (49%), Gaps = 20/541 (3%) Query: 568 VVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADT-SRS 626 ++ ID +I +N A + G+++ LG + + D P ++ + R Sbjct: 495 LLTIDQQSRIQSVNQCATEWLGFSKHHMLGHKVTDF----YADGSPPPRSLLNGKQRERF 550 Query: 627 AIEQDVVLHCRSGGSYD-VHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHD 685 I + + + S G+ V S+ STL S + +LV +D+TE+R+M +QL Y A HD Sbjct: 551 GIRRREIRYRTSDGNERWVRESVR--STLVQSQL--LLVGEDITENRRMEQQLRYQAQHD 606 Query: 686 ALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELAS 745 LT L NR FE +L +L + HAL +IDLD+F+ +ND+ GH AGD L++ A Sbjct: 607 FLTGLLNRNCFEARLVDVLGALKENGVVHALFYIDLDQFRVINDTVGHEAGDEALKQTAQ 666 Query: 746 LMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGAS 805 ++ L LARLGGDEF ++ DCN + A RI+ +++ F W+ +G S Sbjct: 667 ILRESLPIGATLARLGGDEFAVICYDCNEQQALEQGKRILDTLSELDFYWKNTRLALGCS 726 Query: 806 AGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEP-QQAAAHSERAAMSLDEQWR 864 GI ++D +V +QAD ACYA+K+ GR RV +Y P Q ER + + Sbjct: 727 VGIRMLDKTASTPQQVHAQADTACYAAKHEGRSRVHLYRPDDQELRRHEREMSFVSKIHE 786 Query: 865 MIKENQLMMLAHGVASPRIPEARNLWL-ISLKLWSCEGEIIDEQTFRRSFSDPALSHALD 923 + E++ + A + S L+ + +++ EG + F + ++H +D Sbjct: 787 ALAEDRFEVYAQPIVSVNANLEEKLYFEVLVRMRDKEGNYVPPGQFIPAAERFNMAHMID 846 Query: 924 RRVFHE---FFQQAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHL- 979 +RV + +F + + V G+ +S+ LS +S ++ LLE L+ S +P + L Sbjct: 847 KRVIEKTLGWFDRHPEHVDVVGM-VSINLSGRSMSDEGFIHFLLEALKTSTIPSSSISLE 905 Query: 980 IIPAEAILDHAESV---QKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANV 1036 I AI + ++++ KL+ GC I L G L F LK D + +DG+ ++ Sbjct: 906 ITETAAISNLSDAIGLFTKLKQLGCSIALDDFGSGLSSFGYLKRLPVDIIKIDGQFVRDI 965 Query: 1037 QGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 + D +++ I A ++G KT+A V ++ L +GVD G + +P++ + Sbjct: 966 ADDEADYVMVRAIHELATQMGKKTVAEFVENDAILMRLCSLGVDYAQGYHFSVPKPMEEV 1025 Query: 1097 V 1097 + Sbjct: 1026 I 1026 >UniRef50_C0GER8 Diguanylate cyclase and metal dependent phosphohydrolase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GER8_9FIRM Length = 833 Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 116/390 (29%), Positives = 217/390 (55%), Gaps = 15/390 (3%) Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI-P 465 +I D +E KR + +++ ++ A+ +G W+ +L + SW + +++++E+ P Sbjct: 220 YIVVARDYSEKKRILRRSEKNLKD---AHAIARMGSWDLDLATDHLSWSEGIYKIFEVNP 276 Query: 466 PHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVL 524 + +++ + E + P+DR ++ ++S+++++P+++ R+ + DG ++ + + Sbjct: 277 ENFAASYEAFLEFIHPDDRDLVDQAYKESVKNKTPYEITHRLLMPDGRVKWVNEIGRTDY 336 Query: 525 NKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVA 584 + +G R G D+T +K+ +++++EKERL +TL SIG+AV+ D IT +N VA Sbjct: 337 DLQGRPLRSYGTVQDITNLKRAEQSIYEEKERLRVTLRSIGDAVITTDKFGAITDINTVA 396 Query: 585 EKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAI---EQDVVLHCRSGGS 641 EK++GW +A G PL V HI G E+ I + + +L + G Sbjct: 397 EKLTGWAAADACGRPLQEVFHIVHGVTREACEDPVQCVLQSGEICELDSETMLITKDGRE 456 Query: 642 YDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLR 701 + S P+ DG +G +LV +D +E ++ +++Y + HD+LT L NR FE+QL Sbjct: 457 VHIADSAAPIRNDDGDILGVILVFRDFSEEKQKQERIAYLSYHDSLTGLYNRRFFEEQLD 516 Query: 702 ILLQTVNSTHQRHALVFI--DLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLAR 759 L T + + L I D++ K ND+ GH GD LL++ A+++ R+ D++AR Sbjct: 517 RL-----DTPRNYPLTIIVGDVNGLKLTNDAFGHLIGDDLLKQAAAILQEACRADDIIAR 571 Query: 760 LGGDEFGLLLPDCNVESARFIATRIISAVN 789 GGDEF +LLP+ + E A+ I RI +A++ Sbjct: 572 WGGDEFVILLPNASQEDAKRIIKRIKNAMD 601 >UniRef50_Q2BB47 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BB47_9BACI Length = 1106 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 192/807 (23%), Positives = 361/807 (44%), Gaps = 32/807 (3%) Query: 294 RKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWP 353 ++ +S SE +R+ + + + G N +L + Y + + G++F+Q P Sbjct: 145 KQKLSISEQMYRSLFDNHPDAVYSLDLNGDVTAFNDSLVRLFHYDPD-MHGISFRQFVAP 203 Query: 354 EDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWA-LLAVSLVRHTDGTPLYFIAQIE 412 E ++ + + G+ Y+M NR+G+ A + + ++ T ++ IA+ Sbjct: 204 ESMSLVMCMFKLAAKGKPQNYNMTG--INRSGEKFDANITNIPIITDNQITGVFGIAK-- 259 Query: 413 DINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP-HIKPN 471 DI EL E+ Q+ ER+ LA + G W++ K + W + M+E++ + P+ Sbjct: 260 DITELAEKERKLQKAEERLNLAQKTANFGYWDYYFKEDSAYWSEHMYEMFGVSKDEFIPS 319 Query: 472 WQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLNKEGEV 530 + + + + PED K SL+ ++P LE+RI KDG +R + + +L+ +G Sbjct: 320 FDYYKDFIHPEDLAPFLKNYHASLEEKTPADLEYRIIRKDGQVRRLHHQSTLILDGDGCP 379 Query: 531 ERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMA-MKITFMNPVAEKMSG 589 ER +GI+ D+TE +++ + L + E+ ++ V +D A K+ + + G Sbjct: 380 ERAVGISRDVTEQREIEDRLAENTEQFKSFYNNSDVGVWSLDPAGKKVLICSNAILAIYG 439 Query: 590 WTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSIT 649 +T++E P + I D ++ N + + + I Q + R G V + Sbjct: 440 YTKKELYRDPRIWNRSIHPDDVQEVINN-QNKISEGNIIRQQYRIITRDGKLKWVSDHLI 498 Query: 650 PLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNS 709 P+ G I ++ D+T ++ Q+ + A HD +T L NR F++ L L + N Sbjct: 499 PIYDEKGRLIRLDGIVADITAQKQAEAQMEFLAYHDYMTGLPNRRLFDQTLNGLFEGKNP 558 Query: 710 THQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLL 769 ++ A++++DLDRFK +ND+ GH GD +L+E A + + +R D +R+GGDEF ++ Sbjct: 559 --EKFAIMYLDLDRFKHINDTLGHPIGDQVLKEAADRITASIRKGDFASRMGGDEFAIIA 616 Query: 770 PDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIA 828 + ++E A +A +I + + I EG + AS GI+L +N E+ AD A Sbjct: 617 RNVESIEDASRLAAKITGTIQKPYEI-EGYELFITASIGISLYPNNGSTPEELARNADAA 675 Query: 829 CYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPE--- 885 Y +K G+ VY ++ + D + +K++Q + PR + Sbjct: 676 LYHAKQMGKSSHQVYNASMNIESFKKYCLERDMR-NALKDDQFYVEFQPKIEPRTHKLAG 734 Query: 886 ARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISI 945 A L + W I+ F + L + V + + G+S+ Sbjct: 735 AEALLRWNHPDWG----IVSPMEFIPVAEESGLIVEIGDWVIENVIAKMEEWQKG-GLSL 789 Query: 946 SLPLSVAGLSSATLVNDLLEQL----ENSPLPPRLLHLIIPAEAILDHAESV----QKLR 997 +P+S+ N+L E + + + P+LL L + +++ +++ V +KL Sbjct: 790 -VPISINVSGQRFYKNNLAEMIGDLCQKHGISPKLLELELTESSLIHYSDQVLQELEKLG 848 Query: 998 LAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLG 1057 ++ L G L+ + L +D N+ NL D + + + A L Sbjct: 849 QLKIKLSLDDFGTGFSSLTHLRKFRFNTLKIDKSFTKNIISNLEDATITSSLIDMAHGLN 908 Query: 1058 MKTIAGPVVLPLVMDTLSGIGVDLIYG 1084 MK +A V +D L G D I G Sbjct: 909 MKVVAEGVEEFEQLDFLKKKGCDEIQG 935 >UniRef50_B0TL03 Diguanylate cyclase/phosphodiesterase n=1 Tax=Shewanella halifaxensis HAW-EB4 RepID=B0TL03_SHEHH Length = 574 Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 134/454 (29%), Positives = 225/454 (49%), Gaps = 28/454 (6%) Query: 660 GSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFI 719 G++++I++VT+ ++ +L Y A+HD LT LANR FE++L+ + A++FI Sbjct: 109 GTLVIIENVTKQAELEDKLLYQATHDNLTKLANRKQFEERLKRFIAKSKLHTLSGAVIFI 168 Query: 720 DLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARF 779 D+DRFK VND+AGHAAGD LL+ + ++M + +R D LARLGGDEF +LL C++ A Sbjct: 169 DIDRFKPVNDTAGHAAGDELLKRVTAIMKTNIRERDTLARLGGDEFSILLEMCSLNKAVQ 228 Query: 780 IATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGR 839 IA +I + + F + + +VG SAGI+L++ + +++ AD AC +KN GR R Sbjct: 229 IAEKIRKEIESFVFTYGKKSFKVGISAGISLVNVPYDTVSAIINAADNACQIAKNNGRNR 288 Query: 840 VTVYEPQQAAAHSERAAMSLDEQWRMIK----------ENQLMMLAHGVASPRIPEARNL 889 V V + L+E R ++ NQ ++ A + + E + Sbjct: 289 VHVINLENG---------ELEEHIREVEWLGKLNWALASNQFVIYAQKICAIGGGEESSH 339 Query: 890 WLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPL 949 + + ++L +G II F L +DR V F + + + S+ L Sbjct: 340 FEVLIRLKDEDGMIISPGVFIPPAERYDLMPDIDRWVLKATFSKITPSC-----NYSINL 394 Query: 950 SVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVL 1005 S LS +L+N + L+ + P+ + I A + + + L+ G L Sbjct: 395 SGQTLSDDSLINYIENLLDTYNVNPKQICFEITETAAIQELDKTVALISCLKQKGFCFSL 454 Query: 1006 SQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPV 1065 G L F+ LK +YL +DG+ ++ + + ++ I +G+KTIA V Sbjct: 455 DDFGSGLSSFSYLKKLPVNYLKIDGDFVKDIATDSVSYAMVKSINEVGHTMGLKTIAEFV 514 Query: 1066 VLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNS 1099 ++ L+ IGVD + G I + QP + L N+ Sbjct: 515 ESEAILAKLTEIGVDYVQGYYIHEPQPFEKLCNT 548 >UniRef50_A1TS74 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Acidovorax RepID=A1TS74_ACIAC Length = 768 Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 114/313 (36%), Positives = 177/313 (56%), Gaps = 5/313 (1%) Query: 539 DMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGV 598 D+TE K++ + LF+EKE + +TL SIG+AV+C D + +T++NPVAEK++GW A G Sbjct: 434 DLTERKRMEDLLFEEKELVRLTLQSIGDAVLCTDASGHVTYINPVAEKITGWQAFHAAGR 493 Query: 599 PLLTVLHITFGDNGPLMENIYSADTSRSAIE--QDVVLHCRSGGSYDVHYSITPLSTLDG 656 + V + + P SA + AI + +VLHCR G DV S++P++ G Sbjct: 494 DIDEVAPLCTANGVPAEHPARSALSGAQAIPAVRGLVLHCRDGRRIDVENSVSPITDRHG 553 Query: 657 SNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHAL 716 G+V+V++DVTE+ + R++++ A HD LT L NR + + + + AL Sbjct: 554 QITGTVMVLRDVTEATALARRMAHLAQHDMLTDLPNRVLLQDRAQQAIAQARRDGHGLAL 613 Query: 717 VFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVE 775 ++IDLD FK VND+ GH AGD LL ++A +R SD + R GGDEF +LLP + E Sbjct: 614 MYIDLDGFKQVNDTLGHDAGDLLLVQVARRFSRCVRRSDTVCRQGGDEFIVLLPIVEHPE 673 Query: 776 SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNG 835 A +A +I++A + F +G R+G S GI + + E+ AD+A Y +K Sbjct: 674 QACHVARKIVAAC-EAPFDLQGESRRIGLSGGIAMFPQHGSSFEELCRSADVALYTAKRA 732 Query: 836 GRGRVTVYE-PQQ 847 + +Y P+Q Sbjct: 733 DKQHFRMYAGPEQ 745 >UniRef50_Q2SAB8 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SAB8_HAHCH Length = 966 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 137/438 (31%), Positives = 216/438 (49%), Gaps = 12/438 (2%) Query: 665 IQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRF 724 I D+TE ++ +QL Y A HD LT L NR FE +L L +HAL+F+DLD+F Sbjct: 532 IVDITEKKENEQQLHYLARHDPLTGLLNRTEFEYRLNNALVRSREQGLQHALLFMDLDQF 591 Query: 725 KAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRI 784 K VND++GHAAGD LLR++A + LR D LARLGGDEFG+LL C +E A IA R+ Sbjct: 592 KIVNDTSGHAAGDELLRQIAVMFRQHLRERDSLARLGGDEFGILLERCGIEKASEIAHRL 651 Query: 785 ISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYE 844 + V+++ F + +V VG S GI I E+ S AD ACYA+K+ GR R+ V+ Sbjct: 652 RNEVSEFRFALKEKVFSVGVSIGIVPITAATPSIEEIFSLADTACYAAKDAGRNRIIVHN 711 Query: 845 PQQAAAHSERAAMSLDEQWR-MIKENQLMMLAH--GVASPRIPEARNLWLISLKLWSCEG 901 + ++ M + + IK+NQL++ G P + R L+ LK + Sbjct: 712 EKTGEIIRRQSEMQVVTALQEAIKQNQLVLYKQNIGALKPELRGERYEILVRLKQGA--- 768 Query: 902 EIIDEQTFRRSFSDPALSHALDRRVFHEFFQ--QAAKAVASKGISISLPLSVAGLSSATL 959 +I+ F + + +LDR V +F+ A + +++ LS ++ + Sbjct: 769 DILPPGAFLPAAERYNIIRSLDRWVIDAYFKWLHARPGQLERLSQVNINLSSQTINDSEF 828 Query: 960 VNDLLEQLENSPLP-PRLLHLIIPAEAILDHAES---VQKLRLAGCRIVLSQVGRDLQIF 1015 + LL +P ++ I + AI E+ VQ +R G + L G + Sbjct: 829 ADFLLTAFTKYSIPLDKVCFEITESSAISSLVETTALVQNMRAKGIKFALDDFGSGFSSY 888 Query: 1016 NSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLS 1075 + LK+ + L +DG ++ + +D ++ I A +G+ +A V ++ L Sbjct: 889 SYLKSLPVNSLKIDGSFVRDILSDPVDLAMVRSITEVAHIMGLNVVAEFVENEETVERLK 948 Query: 1076 GIGVDLIYGEVIADAQPL 1093 + VD + G I PL Sbjct: 949 SLDVDFVQGYHIHKPMPL 966 >UniRef50_C8W213 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W213_DESAS Length = 1278 Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 185/712 (25%), Positives = 322/712 (45%), Gaps = 48/712 (6%) Query: 413 DINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP-HIKPN 471 +I E+KR ++ + A +G WEW+++ + W ++ + + N Sbjct: 572 EITEVKRIVNALRESEAGLAKAQRIARVGNWEWDIENDKIYWSDEIYHMLNMKTGEFGGN 631 Query: 472 WQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLNKEGEV 530 ++ + + +DR +K I +L +++RI G IR + + N+ G+ Sbjct: 632 FESLMDFIHQDDRDEFKKSIEIALNENKRSCIDYRIITPGGVIRAVYGQGEVIFNERGKP 691 Query: 531 ERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGW 590 R+ GI D+TE K+ E L +++L ++ + A +D + N E+++G Sbjct: 692 VRMFGIVQDITERKKNEEKLHMARQQLLDIIEFLPFATFVVDGRKTVIAWNKAMEELTGV 751 Query: 591 TQEEALGVPLLTVLHITFGDNGPLMEN-IYSADTSRSAIEQDV-----VLHCRSGGSYDV 644 + E G H+ FG + PL+ + I+ D A+ + + L+ S ++ Sbjct: 752 SNAEVFGKDDYAE-HL-FGYSRPLLTDLIFCEDKETEALYEFIERKGNTLYAESHVNFIK 809 Query: 645 HY-------SITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFE 697 S +PL G+ +G++ I+D+TE R M ++L Y ASHD LT + NR S E Sbjct: 810 KSTEIVMWASASPLFDNAGNLVGAIETIRDITERRNMEKELKYLASHDFLTGIHNRYSLE 869 Query: 698 KQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVL 757 K L ++ V + + AL+FIDLD FK VND+ GHAAGD LL+ L++ + S L+ + Sbjct: 870 KCLEQAVKKV-AEGVKSALLFIDLDNFKLVNDTLGHAAGDQLLKTLSATIGSFLQGGHRI 928 Query: 758 ARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWE--GRVHRVGASAGITLIDD-- 813 R GGDEF +LL + VE A A + + ++ F + S GI +ID Sbjct: 929 FRFGGDEFAVLLENVTVEEAGMTAENLRLLIEEHEFCLTMYKTCFNMTISIGIVIIDGIL 988 Query: 814 NNHQAAEVMSQADIACYASKNGGRGRVTVYEP-QQAAAHSERAAMSLDEQWRMIKENQLM 872 + H+ +++ AD + Y +K GGR RV + A + +KE++ + Sbjct: 989 DFHK---ILAYADNSLYKAKEGGRNRVVFAQAGDDVTARMSETNHKIALIKTALKEDRFI 1045 Query: 873 MLAHGV---ASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHE 929 + V +I L +++ GEII F L +DR V Sbjct: 1046 LYLQPVVRMKDGKITHHETL----IRMLGDNGEIISPNYFLTVAERFGLIAQIDRWVV-- 1099 Query: 930 FFQQAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPL-----PPRLLHLIIPAE 984 QAA + + + L ++++G+S + LL+ +E + R+ I Sbjct: 1100 ---QAAMKLLMEYPDLKLFINLSGVSMGDM--SLLDAIEKDIIGSNLDTSRIGFEITETS 1154 Query: 985 AILD--HAES-VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLM 1041 A+ D AE + +++ GC L G F+ LK DYL +DG ++ + Sbjct: 1155 AMRDIRQAEEWIGRIKKLGCSFALDDFGVGFSSFSYLKILPVDYLKIDGTFVCDIYKDST 1214 Query: 1042 DEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPL 1093 L++ + A+ LG KTIA V +++ L IGV+ G +A+ P+ Sbjct: 1215 HAALVSSMNTIARTLGKKTIAEFVENQQIINMLIEIGVEYGQGFYLAEPSPV 1266 >UniRef50_D1SVP0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SVP0_9BURK Length = 770 Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 140/444 (31%), Positives = 223/444 (50%), Gaps = 27/444 (6%) Query: 415 NELKRTEQVNQQLME-----RITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIK 469 EL R + V QL R L N + W+ L+ N F+ + L I+ Sbjct: 309 RELARRQNVAAQLQRAQHDMRTILDNLPSLVAYWDRNLR-NRFANQAYLDWLGMTQEEIQ 367 Query: 470 PNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLNKEG 528 + E + E + A +R +LQ R E + + G +RH+ + + + + +G Sbjct: 368 --GRPIEELLTAEACEAARPYLRRALQGRRQV-YERSVPISSGEVRHM--MVSCIPDMDG 422 Query: 529 EVERLLGINMD-MTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKM 587 E + + + +D +TE K++ + LF+EKE + +TL SIG+AV+C D + +T++NPVAEKM Sbjct: 423 EQAQGIFVQIDDLTERKRMEDLLFEEKELVRLTLQSIGDAVLCTDASGHVTYINPVAEKM 482 Query: 588 SGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIE--------QDVVLHCRSG 639 +GW A G + V + + NG +++ +RSA+ + +VL CR G Sbjct: 483 TGWQAFHAAGRDIDEVAPL-YTPNG-----VHAEHPARSALSGAQALPPGRGLVLFCRDG 536 Query: 640 GSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQ 699 DV S++P++ G G+V+V++DVTE+ + R++++ A HD LT L NR + + Sbjct: 537 RRMDVENSVSPITDRHGQVTGTVMVLRDVTEAMALARRMAHLAQHDMLTDLPNRVLLQDR 596 Query: 700 LRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLAR 759 + + AL++IDLD FK VND+ GH AGD LL ++A +R SD + R Sbjct: 597 AQQAIAQARRDGHGLALMYIDLDGFKQVNDTLGHDAGDLLLVQVARRFTRCVRRSDTVCR 656 Query: 760 LGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAA 819 GGDEF +LLP R I AV D F ++G S GI L + Sbjct: 657 QGGDEFIVLLPIVEHPGQACHVARKIVAVCDAPFDLGSESRQIGLSGGIALFPQHGSTFE 716 Query: 820 EVMSQADIACYASKNGGRGRVTVY 843 E+ AD+A Y +K G+ +Y Sbjct: 717 ELARSADVALYTAKRAGKQHFRMY 740 >UniRef50_Q3JE85 Diguanylate cyclase/phosphodiesterase n=2 Tax=Nitrosococcus oceani RepID=Q3JE85_NITOC Length = 979 Score = 192 bits (488), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 146/551 (26%), Positives = 265/551 (48%), Gaps = 17/551 (3%) Query: 554 KERLHIT--LDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGD- 610 +ER +T L++ ++ D A ++T +N +K++G+ ++ G P +L GD Sbjct: 416 RERDFVTGLLNTAQVIILTQDSAGRVTMLNRQGQKITGYGADQITGRPFYELL---AGDK 472 Query: 611 -NGPLMENIYSADTSRSA-IEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDV 668 + L + + T R + D L C++G + + + L+ S++ + V DV Sbjct: 473 VSPELFQQLEELRTGRRGQVRVDTGLQCQNGSQRTISWFHSRLAVHPSSDVVVLSVGHDV 532 Query: 669 TESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVN 728 TE + ++L++ A HD LT L NR F+ + +L + L++ DLD+FK +N Sbjct: 533 TEREQAEQRLAWLADHDPLTELFNRRRFQHEFEQILGASIRYGTQGGLLYFDLDQFKYIN 592 Query: 729 DSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAV 788 D++GH AGDALLR +A + ++R SD++ARLGGDEF +++ +C+VESA +A ++ + + Sbjct: 593 DTSGHQAGDALLRMVADKLRQVVRGSDIVARLGGDEFAVVIRECDVESAVRVARKVCTQL 652 Query: 789 NDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQA 848 + F G H + S GI L + ++M+ AD+A Y +K GRGR ++ + Sbjct: 653 STLEFPARGGNHSISLSIGIALFPLHGATVRDLMANADVAMYQAKEEGRGRWHLFSSDEQ 712 Query: 849 AAHSERAAMSLDEQ-WRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQ 907 + + EQ + ++E++ ++ V R + + + L+++ G II Sbjct: 713 VRERMQQRVYWKEQIEQALREDRFLLYFQPVLDIRTHTIGH-YEVLLRMYDHRGRIISPA 771 Query: 908 TFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAG--LSSATLVNDLLE 965 F L HA+D V + Q AK + S+G ++L ++++G + LV L + Sbjct: 772 QFIPVAEQSGLIHAIDHLVLRKAIAQQAK-LWSQGYHLTLSINLSGRVVDDPELVPILED 830 Query: 966 QLENSPLPPRLLHLIIPAEAILDHAESVQ----KLRLAGCRIVLSQVGRDLQIFNSLKAN 1021 L + + P L + A + + + +++ GCR + G F LK Sbjct: 831 LLRTTGVNPSSLMFEVTETAAVADLAAAEGFMHRIKAHGCRFAVDDFGVGFSSFFYLKRL 890 Query: 1022 MADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDL 1081 DY+ +DG + + D++ + + A+ LG K +A V + L GVD Sbjct: 891 PVDYVKIDGMFVRELAKSHQDQVFVKALSEVAKGLGKKAVAEFVEDAEALALLHEYGVDY 950 Query: 1082 IYGEVIADAQP 1092 G I P Sbjct: 951 AQGHYIGRPTP 961 >UniRef50_Q7MQD8 Sensory box/GGDEF family protein n=54 Tax=Vibrionales RepID=Q7MQD8_VIBVY Length = 1048 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 155/569 (27%), Positives = 273/569 (47%), Gaps = 18/569 (3%) Query: 539 DMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGV 598 D+T K + E L++ + L + +V +D +I +N A+++ G+ E LG Sbjct: 475 DITSRKLMEEKLYKRESNLRNYYEQQPVMMVTLDKNNRIQQVNRFAQQLLGYQPLEMLG- 533 Query: 599 PLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSN 658 LL + P + + +++ + G + + +I PL+ Sbjct: 534 HLLQEFYCDAQAMTPRQMLLQPTPALQGVWRREIEYRHQDGSAVWIRENIRPLT-----E 588 Query: 659 IGSVLVI-QDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALV 717 G +L++ +D++ ++++ RQL Y A +D LT NR F+ +L+ L+ V S + HA++ Sbjct: 589 SGQILIVGEDISHNKQLARQLEYQAKYDLLTDTFNRNQFDIELKRALREVESHRRVHAML 648 Query: 718 FIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESA 777 +IDLD+ K +ND+AGH AGD ++ AS++ +L + +LARLGGDEF +LL D N +A Sbjct: 649 YIDLDQLKVLNDTAGHDAGDGAIQFCASMLEEVLPHTAILARLGGDEFAVLLKDSNEHTA 708 Query: 778 RFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGR 837 +A II+ ++ FIWE + S GI +ID V +QAD AC+A+K GR Sbjct: 709 IGVAKTIIATLSSQPFIWEKVQINLTCSIGIRMIDHTAESPQMVHAQADTACHAAKEQGR 768 Query: 838 GRVTVYEPQQAAAHSERAAM-SLDEQWRMIKENQLMMLAHGVASPRIPEARNL-WLISLK 895 R ++ + M S++ + ++L + A + P E + + I + Sbjct: 769 NRFKLFSLDSEELQRRQQEMESVNLVHDALANDRLELFAQRII-PLSKECDKMHFEILTR 827 Query: 896 LWSCEGEIIDEQTFRRSFSDPALSHALDRRVFH---EFFQQAAKAVASKGISISLPLSVA 952 + +GE + F + ++H +D +V ++ + A+ G S+ LS Sbjct: 828 IRDKQGEYLSPAIFMPASERYNIAHLIDEQVVTKTLDWLEAHPDALHQLG-RCSINLSGH 886 Query: 953 GLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRLAGCRIVLSQV 1008 + + + LL++L NS +P L L I A + + + +++ GC I L Sbjct: 887 SMGNPEFMAFLLDRLTNSVIPCHKLCLEITETAAMKNVALAMDFFAQVKALGCLIALDDF 946 Query: 1009 GRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLP 1068 G L F LK D + +DG ++ N D +++ I AQ++G +T+A V Sbjct: 947 GSGLSSFGYLKQLPVDVVKIDGIFVQDMHRNESDHIMVRAINELAQQMGKQTVAEFVENS 1006 Query: 1069 LVMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 ++ L+ +GVD G VI PL LV Sbjct: 1007 EIIALLTELGVDYAQGYVIGYPTPLAELV 1035 >UniRef50_Q47ED8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47ED8_DECAR Length = 827 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 180/656 (27%), Positives = 305/656 (46%), Gaps = 39/656 (5%) Query: 475 WYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLNK---EGEV 530 W + P+DRQ R + + F+ E R DG I R A +L+ G V Sbjct: 184 WSMAIHPDDRQRVLLEWRAAALGEATFQTEARFLRADGSIVWARLNAAAMLDGLHLRGHV 243 Query: 531 ERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGW 590 + + D++E K +ALF+EKER +TL+SIG+AV+ ++ +T++N VAE M+GW Sbjct: 244 QTV----EDISERKITEDALFEEKERAQVTLNSIGDAVLTTNLKGDVTYLNLVAEMMTGW 299 Query: 591 TQEEALGVPLLTVLHITFGDNGPLMEN---IYSADTSRSAIEQDVVLHCRSGGSYDVHYS 647 +E A+G PL V I G + N + + + D +L R G + S Sbjct: 300 PREAAIGQPLSEVFRILNGTTREVAPNPAQLAIRENRTVGLAADSILIHRDGLEAAIEDS 359 Query: 648 ITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTV 707 P+ DG G+V+V DV+ESR M ++++ A HD LT L NRA ++L + Sbjct: 360 AAPIHNRDGQVAGAVIVFHDVSESRAMALKMAHLAQHDFLTGLPNRALLTERLSRAIGQA 419 Query: 708 NSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGL 767 ++R ++F+DLD FK +NDS GHA GD LL+++A ++ +R +D + R GGDEF + Sbjct: 420 RRHNKRVGMLFLDLDYFKHINDSLGHAVGDQLLQQVAERLIVCIRDTDTVCRQGGDEFVI 479 Query: 768 LLPDCNVESARF---IATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQ 824 LL + +E AR IA ++++A + I +H V S GI++ D+ A VM Sbjct: 480 LLAE--IEQARDAAPIAEKLLAAFAEPCLIAGNELH-VSLSIGISIYPDDGMDADTVMKN 536 Query: 825 ADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIP 884 AD A Y +K GR + + R + + + R +++ + M+ P+I Sbjct: 537 ADTAMYHAKANGRNNYQFFTTEMNTRAVRRLFIEGNLR-RALRQGEFMLYYQ----PKID 591 Query: 885 EARNLWLISLKL--W-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK 941 A + + S L W E ++ + F + L + V E +Q +A Sbjct: 592 LASGMMIGSEALIRWQDPEHGLVYPKQFVPIAEESGLIVPIGSWVLREACRQ-VRAWQES 650 Query: 942 GISISLPLSVAGLSSATLVNDLLEQ----LENSPLPPRLLHLIIPAEAILDHAES----V 993 G+ +++P+SV + D LE L+ + + P L L + ++ AES + Sbjct: 651 GL-VAVPVSVNISAVEFRHKDFLEGVALILKETGMLPSYLELELTESILMHDAESSATVL 709 Query: 994 QKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHA 1053 + L+ G ++ + G + LK + L +D ++ + D ++ + G Sbjct: 710 EALKTMGMQLAIDDFGTGYSSLSYLKRFPINTLKIDQSFVHDIAIDPDDASIVGAMIGMG 769 Query: 1054 QRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLD----LLVNSSYFAIN 1105 + L + +A V + L + D G + P D LL+N F+ + Sbjct: 770 KNLKQRVVAEGVETEEQLAFLRTLHCDEGQGFLFGRPLPADEFARLLLNDRGFSAD 825 >UniRef50_A3ESX6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Leptospirillum sp. Group II RepID=A3ESX6_9BACT Length = 703 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 153/588 (26%), Positives = 276/588 (46%), Gaps = 35/588 (5%) Query: 498 RSPFKLEFRITVKDG-IRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKER 556 ++P+ E R KDG + A V N++G+ + D++ KQL L EKE+ Sbjct: 79 QTPY--EMRYVKKDGQVFWGEAWGAAVHNRKGDRIGFMVAVRDISRRKQLIHDLHLEKEQ 136 Query: 557 LHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLME 616 +TL SIG+AVV D ++T++NPVAE ++GW EEA G P+ V I Sbjct: 137 WFVTLKSIGDAVVTTDEHGRVTYVNPVAEHLTGWKVEEADGHPVSKVFRIV--------- 187 Query: 617 NIYSADTSRSAIEQ------------DVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLV 664 N YS + + + +++ +L RSG + + S P+ +G G ++V Sbjct: 188 NEYSREPAENPVDRALLEGTIVGLANHTLLLSRSGEEFSIEDSAAPIQDNNGEIRGCIIV 247 Query: 665 IQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRF 724 +DVTE RK+ ++++Y A+ D+LT L NR F+ +L + + T AL+++D+D F Sbjct: 248 FRDVTEKRKLEQRIAYQANFDSLTDLPNRHLFQDRLSRAVGQAHRTGSLVALLYLDVDYF 307 Query: 725 KAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRI 784 K +ND GH GD +L EL + +++R +D +AR+GGDEF ++L D + S + R Sbjct: 308 KNINDRMGHPYGDRVLVELGKRLKTVVRETDTIARIGGDEFAVILCDLHDRSEAMVLGRR 367 Query: 785 ISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYE 844 + F +G + S G+ L ++ A ++ ADIA Y K GR + + Sbjct: 368 LMIEAAMPFRIDGSRADLTVSIGVALYPEDGTDATTLIRNADIALYQVKREGRNNIAFFS 427 Query: 845 PQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEII 904 ++ + + E + +N+ + + + A + + +L W G++ Sbjct: 428 -REMNRFVQSTLKTESELREALDKNRFYLAYQPIVH--LGSALAVGVEALLRWRHRGKVR 484 Query: 905 DEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGIS---ISLPLSVAGLSSATLVN 961 + F + L L + + E ++A + +GI+ +++ +SV + S + Sbjct: 485 FPEEFVPIAEEMGLILPLGQWILREAIREAGVWI-RQGINLGRLTVNVSVKQIHSEGFSD 543 Query: 962 DLLEQLENSPLPPRLLHLIIPAEAIL--DH--AESVQKLRLAGCRIVLSQVGRDLQIFNS 1017 L L + LPP +L + I ++ DH ++ ++R G ++ + G N Sbjct: 544 FLESTLRENGLPPSVLEIEITERTLMFRDHHTVSTLNRIREMGVKVSIDDFGIGYSSLNY 603 Query: 1018 LKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPV 1065 ++ + L +D A + N D ++ I AQ L + +A V Sbjct: 604 IRNFPVNTLKIDRSFLAEMLDNHYDRAIVRAILAMAQSLSIDVVAEGV 651 >UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6V4_METSD Length = 1126 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 262/1132 (23%), Positives = 467/1132 (41%), Gaps = 108/1132 (9%) Query: 13 PHPLLHLVSLGLVSFIFTLF-SLEL-----SQFGTQLAPL-WFPTSIMMVAFYRHAGRMW 65 P L ++V L ++ F++ L SL L + T ++P F +I++V YR W Sbjct: 11 PLSLRNIVKLSIIVFVYCLLGSLNLWIPIPDAWATLISPTAGFSLAILLVFGYR----AW 66 Query: 66 PGIALSCSLGNIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQNLADWL 125 P I + ++ A++ + T + +E ++ LL+++ + L L D+L Sbjct: 67 PAIFMGSLFTHLHATVYYVAA-----TMAVGDTLETLLACYLLKQVARFDPALIRLRDFL 121 Query: 126 RLALGSAIVPPLLGGVLVVLL--TPGDDPL---RAFLIWVLSESIGALALVPLGLLFKPH 180 L + + PL+ ++ VL+ G D +F L ++ L P L F + Sbjct: 122 TLVFFAVGISPLVSALINVLMLVVVGADTTALANSFTNSWLEDAFSYLLFTPAVLAFYHY 181 Query: 181 YLLRHRNPRL----------LFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRL 230 +R R+ +F LLT+ + S +S L P F + L+MW+A+R Sbjct: 182 EPIRWSWARVGEALILAGLVVFSCLLTMLGAMDKS-MSQLMQPQAF-MLFPLIMWAALRF 239 Query: 231 PRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAF 290 + A L L M + + L + S++ L + + +L + + + Sbjct: 240 HQRGAALSVLFVAM--TALWGGAHGLGTFAHDFAQSNL--LDYWMYVLVLSSTGVALSGL 295 Query: 291 RAERKHISESETHFRNAME-YSAI---------GMALVGTEGQWLQTNKALCQFLGYSQE 340 A R SE + ++ Y A+ G+A++ G+ + N AL + GYS Sbjct: 296 NAGR---IRSEARLKEQLDTYDALLHAQADVNEGVAII-HRGKIVYGNDALWRIGGYSPG 351 Query: 341 ELR-GLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRY----YNRNGDVVWALLAVS 395 ++ G F L P D + V ++ + + RY +NG + +A + Sbjct: 352 DIPLGSDFFSLIHPSDRKR----VSEIYQQRLQDMDVPTRYEALGLGKNGRAIHIEIAAA 407 Query: 396 LVRHTDGTPLYFIAQIEDIN----ELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNI 451 R + I I EL +++Q ++L+E + +W + Sbjct: 408 QYRDDSQRIVTLIIDISSRKKAEAELVKSQQDYRELVESVQAI-------VWR-AIPGGK 459 Query: 452 FSWDKRMFELYEIPP----HIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRI 507 F++ + E P P + W + + P+DR + R F ++R+ Sbjct: 460 FTFVSKEAEALLGYPLAQWTTDPGF--WVDKIHPDDRDWVVEYCRTESLKLQSFDFDYRM 517 Query: 508 TVKDG----IRHI-RALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLD 562 DG ++ I + + N + E L+G+ +D+T K L ++ D Sbjct: 518 IAADGRVVWMKDIVKVIPNMSNTRPAE---LVGVMLDITASKAAEADLRLARQ----VFD 570 Query: 563 SIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSAD 622 + E +V D A ++ +N ++++G+ +EE +G L +V+ + E I+ Sbjct: 571 NTAEGIVITDPAFRVLEVNQAYQQITGYDKEEIIG-KLPSVMQAGLHE-AAYYEGIWQTL 628 Query: 623 TSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSA 682 ++ +SG SY SI+ ++ GS V V D+T+ + +L + A Sbjct: 629 RREGQWVGEIWNRRKSGESYPEWLSISQVADAKGSVQNYVAVFTDITQRKLSEERLQFLA 688 Query: 683 SHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRE 742 +HDALTHL NRA ++++ L A++FIDLDRFK +ND+ GH GD LL+E Sbjct: 689 NHDALTHLPNRALLQERIDQALFRAQRNKTAIAVLFIDLDRFKIINDTLGHQTGDMLLQE 748 Query: 743 LASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRV 802 A + LR +D +AR GGDEF +L+ DC R I A FI GR + Sbjct: 749 AAKRLKECLRETDTVARQGGDEFVVLVEDCGDTDYLNTIARKIMATLAQPFILVGRELFI 808 Query: 803 GASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQ 862 AS GI++ D+ A ++ AD A Y +K G+ Y + E ++L+ Sbjct: 809 SASIGISVYPDDGLDTASLLKHADAAMYRAKESGKNTFRFYAAEANTNSVE--LLTLENN 866 Query: 863 WRMIKENQLMMLAHGVASPRIPEARNLWLIS----LKLWSCEGEIIDEQTFRRSFSDPAL 918 R E +L + P++ + R+ +I ++ E ++ F + L Sbjct: 867 LRRAVERNEFVLHY---QPKV-DLRSQKIIGAEAVVRWQHPELGMLSPMQFIPLAEETGL 922 Query: 919 SHALDRRVFHEFFQQAA--KAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRL 976 + + E +QA + + + + +++ LS TL + + L S L P Sbjct: 923 IIDIGAWIMRESCRQAVEWQQLTGQNVRVAVNLSARQFRDETLRQTIADALTESGLTPDC 982 Query: 977 LHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGEL 1032 L L I I+ +AE +Q G +++ G F LK D L +D Sbjct: 983 LELEITESMIMHNAERAREVLQHFHDLGAHVLIDDFGTGYSSFGYLKHFPIDSLKIDRSF 1042 Query: 1033 CANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYG 1084 ++ ++ D + I A L +K +A V + L G D I G Sbjct: 1043 VRDIPDDVDDMAITQAIIAMAHSLQIKVVAEGVETQEQLAFLKKQGCDQIQG 1094 >UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacterium BLR9 RepID=C0INC4_9BACT Length = 765 Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 151/536 (28%), Positives = 249/536 (46%), Gaps = 21/536 (3%) Query: 544 KQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTV 603 K + E LF E+E +TL+SI +AV+ D++ ITF+N VAEK++GW Q EALG P+ + Sbjct: 193 KAIEEKLFAEQESARVTLNSIADAVISADLSGNITFLNSVAEKLTGWQQNEALGRPIADI 252 Query: 604 L----HITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNI 659 L IT G +E S A +++ R G + S P+ G Sbjct: 253 LKVVDEITREPRGSTVERPNQLHRSTKAPSNSILVR-RDGSELPIDESRAPILDRQGQIA 311 Query: 660 GSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFI 719 G+V V+ DV+ +R M ++++ A HD LT L NR + +LR + ++ A++F+ Sbjct: 312 GTVTVLHDVSVTRAMELKMAHLAQHDFLTDLPNRRVLDDRLRQAISLARRQGKQLAVLFV 371 Query: 720 DLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNV-ESAR 778 D+DRFK +NDS GH GD L+ +A + + +R+SD +AR GGDEF +LL + + A Sbjct: 372 DIDRFKHINDSLGHGMGDKALQSMAERLTTCVRASDTVARQGGDEFVILLAEVTTADDAA 431 Query: 779 FIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRG 838 +A +I+SAV H I + + AS GI+ ++ A ++ ADIA Y +K GR Sbjct: 432 IVAKKILSAVALPHRIGRHELQ-ISASIGISTCPNDADDAETLIKHADIAMYQAKEKGRN 490 Query: 839 RVTVYEPQQAAAHSERA--AMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKL 896 + A +ER SL+ R+ E Q +L H + + +L Sbjct: 491 NYQFFR----ADMNERVLQRQSLESSLRLALERQEFLL-HYQPKMNLETGHITGMEALIR 545 Query: 897 WS-CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAK--AVASKGISISLPLSVAG 953 W E ++ +F D L + R V E +Q + + +++ +S Sbjct: 546 WRHPELGLVPPASFIGVAEDCGLMQPIGRWVLQEACRQVKEWMVAGLNPVPVAVNVSAVE 605 Query: 954 LSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVG 1009 + ++ L + L PR L L + ++ AE + L+ AG ++ + G Sbjct: 606 FRRKHFFDGVISTLRETDLDPRYLELELTETVLMKEAEPTIAVLHALKSAGVKLAIDDFG 665 Query: 1010 RDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPV 1065 + L D L +D +V + +++ I G + L + IA V Sbjct: 666 TGYSSLSYLTRLPVDTLKIDRSFVTDVTTRTDNAAIVSAIIGMGKSLNLNVIAEGV 721 >UniRef50_Q7NXK6 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NXK6_CHRVO Length = 816 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 116/349 (33%), Positives = 191/349 (54%), Gaps = 8/349 (2%) Query: 525 NKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVA 584 ++EG+ L+ I D+TE K+ +AL EKER+ ITL+SIG+AV+ D ITF+NP+A Sbjct: 235 DEEGQPGFLMLIT-DVTERKRAEQALRDEKERIRITLNSIGDAVIATDANGNITFLNPIA 293 Query: 585 EKMSGWTQEEALGVPLLTVLHITFGDNGPLMEN---IYSADTSRSAIEQDVVLHCRSGGS 641 E M+GW EALG P+ ++ + G M N + ++ + + L R G Sbjct: 294 EDMTGWQSREALGEPVEKIMPLRESSQGHAMFNPIRLVLSEQRSVGMAMNCALQRRDGQL 353 Query: 642 YDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLR 701 ++ S +P+ G G+++V DV+E+R M ++++ A HDALT+L NR + + + Sbjct: 354 LELEDSASPILDHAGKLTGAIIVFHDVSEARAMAVKMTHLAHHDALTNLPNRMLLQDRTQ 413 Query: 702 ILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLG 761 LQ + R L +D+D FK +NDS GH+ GD LL+ +A + + LR D ++R G Sbjct: 414 QALQQAAHSGDRLGLYILDIDHFKVINDSMGHSVGDQLLQRVARRLQAALRPCDTVSRQG 473 Query: 762 GDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAE 820 GDEF +L+P +E A +A +++ A+++ ++ +G + + S G+ + D++ E Sbjct: 474 GDEFIILVPGLGGIEQAGAMADKMLKAISE-PYLLDGNRYDLSGSIGVGIYPDDSKNQEE 532 Query: 821 VMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKEN 869 + AD A Y +K GR R + + A R A L+ RM E Sbjct: 533 LYRHADAAMYRAKQEGRNRYRFFSSEIEEALLTRQA--LERHIRMGAEQ 579 >UniRef50_C6XCG6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XCG6_METSD Length = 674 Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 162/575 (28%), Positives = 271/575 (47%), Gaps = 38/575 (6%) Query: 539 DMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGV 598 D+TE ++ +ALF E++R H L ++ +AV+ D I F+N AE++ G G Sbjct: 114 DLTENNRIRQALFMEQQRWHAMLSAVRDAVITTDQRGHIEFLNAAAERLLGQGLSRIGGQ 173 Query: 599 PLLTVLHITFGDNGPLMENIYSA-DTS-RSAIEQDVVLHCRSGGSYDV-HYSITPLSTLD 655 PL + + +G L I A D S R D+ L +G + + +I+PLS Sbjct: 174 PLRHFISLA---DGSLQAGIDEALDISMREMRSLDIPLRVLAGHASPILKSTISPLSPEG 230 Query: 656 GSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHA 715 G+++V+Q+ +L D LT + NR + E +L+ L + ++ ++H Sbjct: 231 RQTPGTIIVLQEGQALAPGQPEL------DPLTGIHNRTTLETRLQAALASAHTQGEQHM 284 Query: 716 LVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE 775 +++DLD+FK VND+ GHA GDALL+++ S++ L + +LARLGGDEF +LL C+ + Sbjct: 285 FMYLDLDQFKIVNDTCGHAVGDALLKQIVSIIRGCLSTDALLARLGGDEFAILLLCCDSD 344 Query: 776 SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNG 835 +A IA I + + + F E + V AS G+ ID + ++ A+ ACY +K Sbjct: 345 AAGKIADDICNRIEAFRFAHEQKRFHVSASIGLVRIDHQWQDISALLQIANAACYTAKQE 404 Query: 836 GRGRVTVYEPQQAAAHSERAAMSLDEQW--RM---IKENQLMMLAHGVASPRIPEARNLW 890 GR R +Y A + QW R+ ++EN+ + + +P N Sbjct: 405 GRNRTHLYRDTDFAIKKHHEEI----QWVNRLELALEENRFSLYCQRI----LPLNENSG 456 Query: 891 L---ISLKLWSCEGEIIDEQTFRRSFSDPALSHALDR----RVFHEFFQQAAKAVASKGI 943 + I L+L G +I F + ++ +DR RV H Q + V Sbjct: 457 IHGEILLRLPDGNGGMIPAGAFMPAAERFHITSRIDRWVTKRVLHWLMQH--EHVIDHID 514 Query: 944 SISLPLSVAGLSSATLVNDLLEQLENSPLP-PRLLHLIIPAEAILDHAES---VQKLRLA 999 +S+ +S + + +LE + ++P +L I AI + A++ + +R Sbjct: 515 VLSVNISGQSIGDRAFHDYMLELIVSTPATYSKLCFEITETAAITNLADANSFIASMRRF 574 Query: 1000 GCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMK 1059 G R L G + F LK DYL +DG+ + N++D+ ++ I A G+K Sbjct: 575 GIRFSLDDFGSGVSSFGHLKNLDVDYLKIDGQFIRAIDSNVIDQAMVRCICEIANGTGLK 634 Query: 1060 TIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLD 1094 TIA V V + L G+G+ G + PLD Sbjct: 635 TIAEYVETVEVENLLRGMGIHYTQGYLRHKPAPLD 669 >UniRef50_A4G5U9 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G5U9_HERAR Length = 709 Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 124/425 (29%), Positives = 210/425 (49%), Gaps = 8/425 (1%) Query: 677 QLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAG 736 ++SY ASHD LT L NR FE+ L+ L + + H H ++++DLD+FK VND+ GH AG Sbjct: 273 EISYQASHDELTGLINRREFERCLQSALHDIRTQHGTHTILYMDLDQFKIVNDTCGHHAG 332 Query: 737 DALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWE 796 D LL++L ++ LR +D+LARLGGDEFG+LL +C E A +A + +++ F W Sbjct: 333 DILLQQLTRVLKEKLRQNDILARLGGDEFGVLLRNCPAEPALNVAESLRQTASEFRFAWN 392 Query: 797 GRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAA 856 ++ VG S G+ D+ E++S D ACY +K GR R+ V P ++ Sbjct: 393 DKLFSVGVSIGLLTFSDDELSLNEILSIVDGACYLAKEKGRNRIHVCHPDDGELSERKSQ 452 Query: 857 MS-LDEQWRMIKENQLMMLAHGVASPRIPEARNL-WLISLKLWSCEGEIIDEQTFRRSFS 914 M + + ++EN++++ +A ++ + + + + + L++ EG+++ F + Sbjct: 453 MGWVAKISNALEENRMVLFKQTIAPLQLSQQKIIHFEVLLRMLDEEGKLLPPSFFLPAAE 512 Query: 915 DPALSHALDRRVFHEFFQQAAKAVASKGI--SISLPLSVAGLSSATLVNDLLEQLENSPL 972 L +D V F + + S+ LS A + L+ + EQ + + Sbjct: 513 RYNLMTRIDFWVIKTAFSYYRDFCTDPAVAYTCSINLSGATVGDERLIAYIREQFQAYGI 572 Query: 973 PPRLLHLII---PAEAILDHAES-VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLL 1028 P + I A A LD A + +Q L+ GCR L G + F LK +Y+ + Sbjct: 573 SPAGICFEITETAAIANLDRAVTLMQDLQQIGCRFALDDFGSGMSSFGYLKKLPINYIKI 632 Query: 1029 DGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIA 1088 DG ++ + +D ++ I +G++TIA V M L + V+ G I Sbjct: 633 DGSFVKDMLHDRIDRAMVEAINNIGHVMGIQTIAEFVEDEKTMIALQEMNVNFAQGYGIG 692 Query: 1089 DAQPL 1093 +PL Sbjct: 693 KPEPL 697 >UniRef50_Q0AG61 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Nitrosomonadaceae RepID=Q0AG61_NITEC Length = 984 Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 149/561 (26%), Positives = 258/561 (45%), Gaps = 27/561 (4%) Query: 545 QLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVL 604 Q + L +EK+ + LD+ V+ D + KI N E ++ +++EE G + +L Sbjct: 420 QQRDELSKEKDFIENLLDTAQVVVLTQDASGKIIMTNTYGEILTRYSEEELQGKHFMELL 479 Query: 605 HITFGDNGPLMENIYSADT--------SRSAIEQDVVLHCRSGGSYDV---HYSITPLST 653 P E Y+ D +R + + ++ C+ +V H +T S Sbjct: 480 -------APDGEQ-YNLDVYLLEIRKGNRDQLRHEAIVLCKDDSKRNVAWLHSRLTWQSK 531 Query: 654 LDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQR 713 D S I SV + D+TE +++ L++ A HD LT+L NR F ++L +L Sbjct: 532 DDPSVILSVGL--DITEYKRVEGHLAWLADHDPLTNLYNRRRFSEELEQILSWAERYQHP 589 Query: 714 HALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN 773 AL+F DLDRFK VND++GH AGDA+L+ +A ++ +R++D+ ARLGGDEF ++LP+ Sbjct: 590 GALLFFDLDRFKFVNDTSGHQAGDAMLKMVADMLSRTVRTADIAARLGGDEFAVILPEIM 649 Query: 774 VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASK 833 +A +A +I++ + + GR H + AS GI + ++ + ++++ AD+A Y +K Sbjct: 650 PGAAIEVAKKILARLGETQLSLNGRTHNISASIGIAIFPEHGNNVHDLLAAADLAMYQAK 709 Query: 834 NGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLIS 893 GRG ++ + R + E+ + +L + + + Sbjct: 710 ETGRGTWHLFSSDDQSRERVRTLVYWKEKIEYANAHDRYLLYLQPIQTLRDGMTHHYEVL 769 Query: 894 LKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAK--AVASKGISISLPLSV 951 L++ +G I F R+ L H +D V H+ AA+ ++ I S+ LS Sbjct: 770 LRMQDEDGTIHPPGAFIRAAEHTGLIHKIDHLVLHKAIALAARINRAENRRIGFSINLSA 829 Query: 952 AGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQ----KLRLAGCRIVLSQ 1007 + L+ + + L + + P LL I A LD+ + L+ GC VL Sbjct: 830 HAFNDPELLPTISQALSVNQIDPGLLMFEITETAALDNLPGTRGLLYDLKQLGCGFVLDD 889 Query: 1008 VGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVL 1067 G F L+ D + +DG N+ N D++L++ + A+ G K A V Sbjct: 890 FGVGFSSFYYLRELPVDAVKIDGSFIRNLASNPDDQILVSALCSVAKGFGKKITAEFVEN 949 Query: 1068 PLVMDTLSGIGVDLIYGEVIA 1088 ++ L + VD G I Sbjct: 950 KEILSILDKLEVDFAQGYYIG 970 >UniRef50_B5JPN9 Sensor protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JPN9_9BACT Length = 1323 Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 108/295 (36%), Positives = 169/295 (57%), Gaps = 14/295 (4%) Query: 262 TYLMSHMPWLPFLLILLPANIMTMVMYAF-----------RAERKHISESETHFRNAMEY 310 TY+ +P +L++ P T V F RAE + ESE+ FR + EY Sbjct: 372 TYIRKDGERIPVILVVTPMRGDTGVKSGFLGIARDISARKRAE-NDLRESESRFRRSFEY 430 Query: 311 SAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGE 370 S IGMA+V EG+W+Q N+AL L Y +EEL L+FQ++T P+DL+ DL +++ + G+ Sbjct: 431 SGIGMAIVSLEGKWIQVNQALLDMLEYKREELLELSFQEITHPDDLDADLALLKETLDGK 490 Query: 371 INTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMER 430 +Y++EKRY++ G + W L VSLVR G P++F++QI+D+ E ++ +Q ER Sbjct: 491 RQSYALEKRYFDSKGKIKWVNLNVSLVRDWKGEPVHFVSQIQDVTERHLLDEDLKQARER 550 Query: 431 ITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI-PPHIKPNWQVWYECVLPEDRQHAEK 489 + LA EAG IGIW+W+ + WD +M L+ K + WY V P+D EK Sbjct: 551 LLLATEAGKIGIWDWDAATDTLLWDDQMLRLFGYEKEEFKTPFDAWYNGVHPDDFPELEK 610 Query: 490 VIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLNKEGEVERLLGINMDMTEV 543 ++ + + EFRI + G IR ++ LA +++ G+ +R++GIN D+TE Sbjct: 611 KRLAAIAGETQYDEEFRIVLPSGEIRTLKTLAIVQMDEFGKAKRMVGINWDVTEA 665 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 87/389 (22%), Positives = 158/389 (40%), Gaps = 50/389 (12%) Query: 328 NKALCQFLGYSQEELRGLTFQ--------QLTWPEDLNKDLQQVEKLISGEINTYSMEK- 378 N C YS+EEL G T + ++ W K + +I++ + K Sbjct: 53 NDQFCAISQYSREELMGKTHRVVNSGYHPEVFW------------KKVWADISSGATWKG 100 Query: 379 RYYNRN--GDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQV--NQQ--LMERIT 432 + NR G + W + V G ++A DI E K+ E N Q L E Sbjct: 101 QICNRAKFGGLYWLQTTIHPVLDERGEIEQYVAFRTDITEQKQVENKLRNSQMHLQETAR 160 Query: 433 LANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPED--RQHAEKV 490 LA +G WEW+L SW ++E+ P +P+ PE R + Sbjct: 161 LAK----VGSWEWDLIDQKLSWSWMTKVIHEVGPDYEPDLDSAI-AFYPEGEMRNRINSL 215 Query: 491 IRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEA 549 + + ++ PF E +I ++G ++ +R + + + + R+ G+ D+ + +++ E Sbjct: 216 VERTTRTGEPFDDELQIRTQEGRLKWVRTIGQAEM-VDSQCVRVFGVFQDIDDDRRMREQ 274 Query: 550 LFQEKERLHITLDSIGE-AVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHI-- 606 + L +DS+ E +V+ D IT N AEK+ G+ E +G+ + H+ Sbjct: 275 SERNSALLRSLVDSVTEFSVIATDDDGVITLFNAGAEKLLGYEASEVVGLKKAAIFHMES 334 Query: 607 -----TFGDNGPLMENI-----YSADTSRSAIEQDVVLHCRSGGSY-DVHYSITPLSTLD 655 + + L E++ + A + R EQ + R G V +TP+ Sbjct: 335 EVEARSVELSKELGEDVSGFQTFVAKSLREGAEQREWTYIRKDGERIPVILVVTPMRGDT 394 Query: 656 GSNIGSVLVIQDVTESRKMLRQLSYSASH 684 G G + + +D++ ++ L S S Sbjct: 395 GVKSGFLGIARDISARKRAENDLRESESR 423 >UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H367_METFK Length = 1070 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 237/1055 (22%), Positives = 439/1055 (41%), Gaps = 55/1055 (5%) Query: 64 MWPGIALSCSLGNIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQNLAD 123 M PG+ L A L+F S L N+ A +G LL++ + + + L D Sbjct: 1 MLPGLLLGAVATQYTAG-LVFPASFL---IGCGNVASAALGYYLLKRFIRFEPEMTRLRD 56 Query: 124 WLRLALGSAIVPPLLG------GVLVVLLTPGDDPLRAFLIWVLSESIGALALVPLGLLF 177 + + L A++ PLL G+ + + P D +L W + +++G + L P L Sbjct: 57 LMGMVLVGAVISPLLSATSGALGLRLFGVVPDSDLHVTWLQWWMGDALGIILLTPAILAC 116 Query: 178 KPHYLLRHRNPRLLFESLLTLAITLTLSWLSM-------LYLPWPFTFIIVLLMWSAVRL 230 + +R +LL E++ ++ L L +L+ L + L++W+ + Sbjct: 117 FHYEPIRWTRAKLL-EAVSLASMLLGLCFLAFNDLLSQAGELEAKAFLVFPLVIWAVLSF 175 Query: 231 PRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAF 290 + A L VM + + W+ F L+ + + ++ Sbjct: 176 HQRGAAAASLLIVMTALWGGGGYHGFFSMEISNAALFNYWM-FALVTVSIGVGLSGLHVG 234 Query: 291 RAERKHISESETHFRNAM---EYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELR-GLT 346 R + + NA+ + A +V +G+ + N+A+ + GY ++ G + Sbjct: 235 RLQADERLRQQLGLYNALSNAQSDAGEGVMVIEDGKIIYANEAVRKIGGYDARDISMGSS 294 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 F L P D + Q ++ I GE E ++ G + + V+ + DG+ Sbjct: 295 FLSLIHPSDRERVAQHYKQRIRGEYTPSRYEALAISKLGKPI--PIEVAAANYRDGSE-R 351 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNI-FSWDKRMFE-LYEI 464 + I DI+ K+ E+ L R + W P F++ + E L Sbjct: 352 IVVLIIDISSRKQAEEA--LLQSRAEYRKLVESVKAVVWRATPEAAFTFVSQEAESLLGY 409 Query: 465 P-PHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANR 522 P N W + + P+DR + LE+R+ DG ++ + Sbjct: 410 PVREWTSNTSFWVDKLHPDDRPWVVDFCARETRQLKDHVLEYRMRAADGRTVWLQDIVRV 469 Query: 523 VLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNP 582 + ++ G+ + L G+ +D+T+ K E+L K+ D+ EA++ D I +N Sbjct: 470 IPDRFGKPQELFGVMLDITDRKAAEESLNLSKQ----VFDNTSEAILIADRDRNILEVNQ 525 Query: 583 VAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSY 642 M+G+ +E+ +G L + G G L+ N+ +++ RSG Y Sbjct: 526 AYLDMTGYGREDCVGTYLALLDEPAGG--GQLIGNLVQQHGKWMG---ELLAQKRSGEYY 580 Query: 643 DVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRI 702 SI+ + GS V+V+ D+++ ++ +L + A+HD LT L NR ++++ + Sbjct: 581 PAWVSISTVHDNHGSLQNYVVVLTDISQRKQAEERLQFLATHDGLTGLPNRTLLQERMEL 640 Query: 703 LLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGG 762 + Q ++FIDLDRFK +ND+ GH AGD LL+E+A + LR +D +AR GG Sbjct: 641 AVLRAQRYQQCVGVLFIDLDRFKIINDTLGHQAGDVLLQEVAGRLGECLRQTDTIARQGG 700 Query: 763 DEFGLLLPDCNVESARF--IATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAE 820 DEF +L+ D +E +A +I+ A+ + + ++ + AS GI++ D+ + Sbjct: 701 DEFVVLVEDF-IEQQYLVNVARKIMHALAQPFILMQQELY-ISASIGISVYPDDGVDISS 758 Query: 821 VMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVAS 880 ++ AD+A Y +K+ G+ Y A R + + R ++ N+ +L A Sbjct: 759 LLKNADMAMYRAKDDGKNTFHFYSADGNANSVSRLTLE-NSLRRALERNEFSLLYQ--AK 815 Query: 881 PRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAA--KA 937 + E + +L W S E ++ Q F + + + V + + A + Sbjct: 816 LDLAEQNIIGAEALIRWHSAELGMVSPQDFIPVAEETGMIIEIGEWVLQQACRDACHWQE 875 Query: 938 VASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----V 993 VA + I + + +S +L + LE S L P L L I I+ +AE + Sbjct: 876 VAGRPIRVGVNISARQFREDSLYQAISNALEESGLTPNCLELEITESMIMQNAERASQML 935 Query: 994 QKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHA 1053 Q R G +++ G LK D L +D ++ + D + I A Sbjct: 936 QHFRNLGSYVLIDDFGTGYSSLGYLKHFPIDSLKIDRSFVRDIPQDSDDMAITQAIIAMA 995 Query: 1054 QRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIA 1088 L + +A V ++ L G G D + G + + Sbjct: 996 HSLKINVVAEGVETQAQLEFLRGQGCDQLQGYIFS 1030 >UniRef50_B9Z5W9 Putative PAS/PAC sensor protein n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z5W9_9NEIS Length = 810 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 112/314 (35%), Positives = 171/314 (54%), Gaps = 6/314 (1%) Query: 363 VEKLISGEINTYSMEKRYYNRNGDVVWAL-LAVSLVRHTDGTPLYFIAQIEDINELKRTE 421 ++++ G + Y++E R ++ + +W V + R G P I DI+ KR E Sbjct: 481 LQRIAQGRDSRYAIEYRLLDKRHNALWIHDRGVVIERDAAGQPRRLIGTHTDISARKRDE 540 Query: 422 QVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELY-EIPPHIKPNWQVWYECVL 480 ++ ER+ LA A +GIWEW + N WD+RM+ELY P P + WY + Sbjct: 541 AERRRQSERMALAVAAARVGIWEWHIGSNTLIWDERMYELYGRQPGDGDPPLEYWYNSLH 600 Query: 481 PEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLNKEGEVERLLGINMD 539 P+D + A + + + Q + P EFR DG +RHIRALA ++ G + G N D Sbjct: 601 PDDSERALQEVVLAQQGKKPLDTEFRALWPDGQVRHIRALATVRCDEYGVPVAMTGTNWD 660 Query: 540 MTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVP 599 +TE ++L +AL +EKE +TL SIG+AV+ D A+ I +MNPVAE+++GW Q EA G P Sbjct: 661 ITEQRRLADALAEEKELWRVTLHSIGDAVIATDTALVINYMNPVAERLTGWRQAEARGWP 720 Query: 600 LLTVLHITFGDNG-PLMENIYSADTSRSAI--EQDVVLHCRSGGSYDVHYSITPLSTLDG 656 L TVL + +G PL + + + + + VL R G + V S P+ +G Sbjct: 721 LSTVLVLRDQASGQPLADPVEACLRQGQPVFLQPGAVLIGRDGRAVPVLDSAAPVRAGNG 780 Query: 657 SNIGSVLVIQDVTE 670 S IG+VLV+QD+ + Sbjct: 781 SVIGAVLVLQDLRD 794 Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 167/563 (29%), Positives = 267/563 (47%), Gaps = 29/563 (5%) Query: 17 LHLVSLGLVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRHAGRMWPGIALSCSLGN 76 L +++GL S + L + +A +W M R +AL+ +G Sbjct: 3 LCALAMGLASLALAWLGIWLLRGPGDVAAIWLVNGFAMAVLARAPATARLPLALAFLVGV 62 Query: 77 IAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKL---LPWYNPLQNLADWLRLALGSAI 133 A++L +T L N+ E +GA+LLR + P+ + L+ A L LA+G Sbjct: 63 GLANVLADNTPLLAFGLGLANLAEVALGALLLRLIHHGEPFLSSLRLTALSL-LAVGPCA 121 Query: 134 VPPLLGGV-LVVLLTPGDDPLRAFLIWVLSESIGALALVPLGLLFKPHYLLRHRNPRLLF 192 LVV L G + W ++ +GAL LVPL LL + P Sbjct: 122 AVVGASAGALVVALELGVPFGTIWPSWWFADGMGALVLVPLLLLSDRSRWRQLLAPTKWL 181 Query: 193 ESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAA 252 L + ++ + YLP+PF F + L+ SA+ L +F T++ + Sbjct: 182 RVLPLALLVALTCYVGVRYLPYPFIFAEIPLIASAMLLG------LFPATLLTLLAAALI 235 Query: 253 DPSLLATPRTYLMSHMPW------LPFLLILLPANIMTMVMYAFRAERKHISESETHFRN 306 + L P L W LP + + ++ +M A ++ + S + Sbjct: 236 VAATLDAPEMVLAGLQRWGPAGFNLPLAVTVSLPVMVGALMDALERQQTALELSRKELSD 295 Query: 307 AMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKL 366 M+ +AIGMALV T G W++ N ALCQ LGY +EEL LTFQ +T P+DL DL V L Sbjct: 296 TMQAAAIGMALVSTSGHWIKVNPALCQLLGYREEELLPLTFQDVTHPDDLELDLANVHAL 355 Query: 367 ISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQ 426 + G +TY MEKRY ++G +WA LAVS+VR DG PLYF+AQ+EDI++LKR ++ ++ Sbjct: 356 LEGRADTYRMEKRYLRQDGRELWAQLAVSIVRDRDGRPLYFVAQVEDIDQLKRAQEALRE 415 Query: 427 LMERITLANEAGGIGIWEWELKPN-IFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQ 485 R A G G+W+W+L +F + L P I + + W+ + P+D + Sbjct: 416 SEARWNFALSGSGQGVWDWDLASGTVFFSETWKGMLGYAPGEIGQDIEEWWSRIHPQDEE 475 Query: 486 HAEKVIRDSLQSR-SPFKLEFRITVKDGIRHIRAL----ANRVLNKE--GEVERLLGINM 538 V++ Q R S + +E+R+ K RH AL V+ ++ G+ RL+G + Sbjct: 476 WVRVVLQRIAQGRDSRYAIEYRLLDK---RH-NALWIHDRGVVIERDAAGQPRRLIGTHT 531 Query: 539 DMTEVKQLNEALFQEKERLHITL 561 D++ K+ ++ ER+ + + Sbjct: 532 DISARKRDEAERRRQSERMALAV 554 >UniRef50_C7RNJ0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNJ0_9PROT Length = 957 Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 150/528 (28%), Positives = 248/528 (46%), Gaps = 16/528 (3%) Query: 576 KITFMNPVAEKMSGWTQEEALGV---PLLTVLHITFGDNGPLMENIYSADTSRSAIEQDV 632 +I +N +SGW+ E +G LL + +E I + D + +E Sbjct: 432 RILTLNRYGHLLSGWSTAELIGKRFGDLLRPDESAGAETRHALEEIVAGDRQHTQLES-- 489 Query: 633 VLHCRSGGSYDV--HYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHL 690 +L +G SY++ ++S P D I SV + D TE ++ +SY A HD LT L Sbjct: 490 ILVGANGESYEITWNHSRLPGRIDDAVVILSVGI--DHTERKRAESHVSYLAEHDPLTGL 547 Query: 691 ANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSM 750 NR F+ +L L + + AL+++DLD FK VND +GH AGDALLR +A + ++ Sbjct: 548 VNRQHFQHELDKALLSARRLARDGALLYLDLDGFKYVNDLSGHQAGDALLRTVADEVANV 607 Query: 751 LRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITL 810 RSSD+L RLGGDE G+LL +C+ + A +A +I + + F HRV AS GI + Sbjct: 608 ARSSDLLGRLGGDELGVLLHECDRDGAVQVAEKINKRLAEIRFPELAASHRVSASIGIVV 667 Query: 811 IDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQW-RMIKEN 869 + ++++ ADIA Y +K+ G +Y + ++ + +E R + + Sbjct: 668 FSEATMDVKQLLANADIAMYQAKSRGGAGWHIYSEGEGVQEKMQSRLHWEEMINRSLLDE 727 Query: 870 QLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHE 929 L++ + R + + + +++ S +G II F D L +DRRV H+ Sbjct: 728 GLLVYYQPILDIRARQVSHYEAL-VRMRSADGSIIPPGLFMEVAEDSGLIREIDRRVIHQ 786 Query: 930 FFQQAAKAVA-SKGISISLPLSVAGLSSATLVNDLLEQLENSP-LPPRLLHLIIPAEAIL 987 F + A + S+ LS ++ A L++ + ++L SP LP ++ I A+ Sbjct: 787 VFGKMLALFAIGRSYKFSINLSGVSINDARLLSFIRDELSRSPLLPSHVVFEITETAAVS 846 Query: 988 DHAES---VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEM 1044 D + + + +R GC L G FN +K DY+ +DG + + D++ Sbjct: 847 DFSAARTFMNAVRELGCAFSLDDFGVGFSSFNYVKQLPVDYVKIDGSFVRTLVDSPDDQV 906 Query: 1045 LITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQP 1092 + + A+ G KT+A V + L GVD G I P Sbjct: 907 FVRALAEVARGFGKKTVAEFVEDERALKMLRSFGVDYAQGYFIGKPAP 954 >UniRef50_B9R245 Putative uncharacterized protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R245_9RHOB Length = 892 Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 178/692 (25%), Positives = 304/692 (43%), Gaps = 35/692 (5%) Query: 433 LANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP-HIKPNWQVWYECVLPEDRQHAEKVI 491 LA + GI +W +++ N +WD MF L+++ P + W V P+D A + Sbjct: 206 LARSSAGIAVWRFDMAANRLTWDDAMFRLFDVDPGSFNGEFNDWERTVHPDDIDAARRQF 265 Query: 492 RDSLQSRSPFKLEFRITVKDGIRH-IRALANRVLNKEGEVERLLGINMDMTEVKQLNEAL 550 ++ + +S F +FRI +DG H + A + + + +G V +G+N D+T+ K++ ++L Sbjct: 266 LEAYEKKSGFATDFRIVRRDGSIHWLAAHCSFLEDDDGNVTEAVGVNWDITDSKEMADSL 325 Query: 551 FQEK-------ERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTV 603 F+ + E L +TL S+ + V D ++ F N A + +G E + VP + Sbjct: 326 FEREKEARLRSEELEVTLASVVQGVSAFDKDGRLHFCNDRAGEFTGLPPE--MLVPGTSY 383 Query: 604 LHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRS----GGSYDVHYSITPLSTLDGSNI 659 G + T + H RS + +S P+ DG Sbjct: 384 HAYNQYRQGAFVTGFPGEATKAVSESVQPTSHIRSLIHLSNGRILSFSAAPMP--DG--- 438 Query: 660 GSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQ-RHALVF 718 G V +DVTE ++ +A D LT LANR SF + L ++ + +L+ Sbjct: 439 GWVETYEDVTEKVVADERVKKAAETDNLTELANRLSFRETLDHVVDIAGDADEVASSLLL 498 Query: 719 IDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESAR 778 IDL+ FKAVNDS GH GD LL+ +A+ + ++ D+ ARLGGDEF L+L E R Sbjct: 499 IDLNDFKAVNDSHGHVVGDRLLQHVANTLKAVSEGGDLAARLGGDEFALVLKPRTEEDIR 558 Query: 779 FIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRG 838 IA + AV D +G + + G S G+ +I + + E +S+AD+A Y +K R Sbjct: 559 EIANGLC-AVFDLPVNLDGLMVQSGLSVGVAIISADGTGSEETLSRADLALYKAKQEKRS 617 Query: 839 RVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWS 898 V++ A +ER + + R+++ L + + + + R +L W Sbjct: 618 AYRVFDADIAKEDAER-KRTKNALIRVVENQGLDVFCQPILN--LETHRVDHFEALVRWH 674 Query: 899 CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS--KGISISLPLSVAGLSS 956 +GE + +F A L +V + +++A+ + +SV L Sbjct: 675 -QGE--ESYVPPSNFIPLAEEIGLIAKVGDFVLSEVLRSLATWPNDYRACVNVSVLQLGD 731 Query: 957 ATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRLAGCRIVLSQVGRDL 1012 V +L L+ + + P L L + ++ E ++KLR AG + L G Sbjct: 732 GRFVERVLNGLKEAGISPHRLELELTESVLMSAGSAAHEDLRKLRDAGLNLALDDFGIGF 791 Query: 1013 QIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMD 1072 F L+ + L +D + V+ + ++ I A L MK+ A V + Sbjct: 792 SSFGYLQELPFNKLKIDRRFVSEVEKDEGSAAILRTIAALADNLDMKSTAEGVETAQQLS 851 Query: 1073 TLSGIGVDLIYGEVIADAQPLDLLVNSSYFAI 1104 ++ G G I PL+ V +YF I Sbjct: 852 VVTACGCHYGQGYFIGQPIPLE-DVQQAYFEI 882 >UniRef50_B0CD40 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0CD40_ACAM1 Length = 1197 Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 174/712 (24%), Positives = 317/712 (44%), Gaps = 65/712 (9%) Query: 416 ELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQV- 474 + +R + ER +L + ++W++ + + E PH + V Sbjct: 205 QAERANTCFNNVQERFSLVASSFRGCFYDWDIAIDSILQFTKTNEEQAAKPHAPRQFSVP 264 Query: 475 -WYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHI--RALANRVLNKEGEVE 531 W + + PEDR E +I Q F+LE+R DG + R + R + +G Sbjct: 265 EWLDQIHPEDRHLLETLIDQDFQGEDQFELEYRWQ-SDGQPFMCDRGVIQR--DAQGVPI 321 Query: 532 RLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWT 591 R++G+ ++ + K+L E Q+ + L I + D+A T++NP K++G + Sbjct: 322 RVVGVLTNIADFKRLEENAQQQIDHYQTLLADISIVIFKTDLAGHWTYLNPAWSKLTGIS 381 Query: 592 QEEALGVPLLTVLHITFGDNGPLMENIYS--ADTSRSAIEQDVVLHCRSGGSYDVHYSIT 649 E++LG P+ +H D+ P ++ + + + + ++ C+ GG V Sbjct: 382 LEDSLGKPIWDFVH---PDDRPGLQEAFHNLVEQTSESYNHELRFFCQQGGCAWVVVHNH 438 Query: 650 PLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNS 709 + DG+ IG+ ++D +E ++ + L + A HD LT L NR F +L + Sbjct: 439 VIRAEDGTCIGTAGTLEDASERKQTEQALLHDALHDGLTQLPNRVLFMDRL----EQACR 494 Query: 710 THQRH-----ALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDE 764 + QRH A++F+DLDRFK +ND+ GH GD LL +A + + LR D +ARLGGDE Sbjct: 495 SFQRHPDEIFAVLFLDLDRFKIINDTLGHMVGDQLLVAVAHRLQTCLRPEDTVARLGGDE 554 Query: 765 FGLLLPDCN-VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMS 823 F LLLP+ + E A I+ RI+ ++ + + V + S GI + + + +++ Sbjct: 555 FTLLLPNIDQAEDAMHISDRILQSLKEPFTLDHTEVF-ITVSIGIAMSGNPEQKPDDLLR 613 Query: 824 QADIACYASKNGGRGRVTVYEPQ-------QAAAHSERAAMSLDEQWRMIKENQLMMLAH 876 ADIA Y +K G+G V+ P+ Q +E DE++R+ + H Sbjct: 614 HADIALYRAKANGKGCYAVFSPEMPLQPLAQVQIETEVRQALDDEEFRLYCQP-----VH 668 Query: 877 GVASPRIPEARNLWLISLKLW--SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEF---F 931 + E +W +L+++ ++ F S +D L +L V + Sbjct: 669 SL------ENNEVWGFTLQMYWQHPHKGVLPSFEFLPSVTDTGLQRSLGWWVLRKACAQL 722 Query: 932 QQAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLII---------P 982 Q + + +SI + +S A L+S+ ++ LE + P+ HL++ P Sbjct: 723 HQWQRMPTEQPLSIWVAVSEAQLTSSNFLSKFERLLEKHDINPQ--HLVLELPPSLWPRP 780 Query: 983 AEAILDHAESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANV--QGNL 1040 ++ +L H +Q + G ++ Q +D + ++ D++ L L N+ QG L Sbjct: 781 SKKVLAH---LQDVHSRGVQLARVQDNQDFDWLSGEESLPVDWVKLSSTLLGNLDQQGYL 837 Query: 1041 MDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQP 1092 + I+ A+ +K +A + P +S + D G D P Sbjct: 838 ESIHSLFILAASAE---IKMLADGIQTPKQRLLMSALKCDYGQGHNFTDPIP 886 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 30/134 (22%), Positives = 57/134 (42%) Query: 290 FRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQ 349 F+ ++ + H++ + +I + G W N A + G S E+ G Sbjct: 333 FKRLEENAQQQIDHYQTLLADISIVIFKTDLAGHWTYLNPAWSKLTGISLEDSLGKPIWD 392 Query: 350 LTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIA 409 P+D + L+ +Y+ E R++ + G W ++ ++R DGT + Sbjct: 393 FVHPDDRPGLQEAFHNLVEQTSESYNHELRFFCQQGGCAWVVVHNHVIRAEDGTCIGTAG 452 Query: 410 QIEDINELKRTEQV 423 +ED +E K+TEQ Sbjct: 453 TLEDASERKQTEQA 466 >UniRef50_D1UJZ4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UJZ4_9BURK Length = 1150 Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 212/790 (26%), Positives = 342/790 (43%), Gaps = 67/790 (8%) Query: 297 ISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTW---P 353 + ESE FR E + +A++ +G+ + N + F G S E R L + W Sbjct: 314 LRESEARFRGIFETTRRFIAVLDPDGRHVAVNPVVHAFTGLSAGETRSLYLWEGHWWLDD 373 Query: 354 EDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIED 413 D + V + GE + + +R + G ++ +++ +R G + A+ D Sbjct: 374 SDRARVRDGVRRAACGEYVQFEVGQRAAD--GRIMSTDMSMWPLRGESGEVVRIFAEAHD 431 Query: 414 INELKRTEQV--NQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFEL--YEIPPHIK 469 I LK T+ + Q R + N G I E I + M EL YE I Sbjct: 432 ITSLKDTQAALEDSQRFFRASFENTPVGFAIVVGE--GVIVDANNAMCELLRYEKADLIG 489 Query: 470 PNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFK-LEFRITVKDGIR-HIRA-LANRVLNK 526 +++ + + +D + D ++S + +E R T DG+ +R+ L + Sbjct: 490 RSFR---QITVHDDPTRPLSAMPDRVKSGNGRAVIEKRYTRGDGVVIQVRSHLVVTAYDA 546 Query: 527 EGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEK 586 + + + D+TE Q + AL++ +E +TL S+ E V+ D+ +T N A K Sbjct: 547 DDQPSEAFLMVEDITERVQRDAALYEAQELAQVTLTSLAEGVIRTDLNGAVTLCNVAAAK 606 Query: 587 MSGWTQEEALGVPLLTVLHI-TFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYD-- 643 + G + + P+ +VL + G L S S + D + ++ G Sbjct: 607 LMGMEIADIVDKPIASVLRLLEIGTARALPCPAVSVLASGEPVRIDDFVGLQASGRQRRV 666 Query: 644 VHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRIL 703 V S +PL +DG +G+V V+QD + + L+ A D LT L NR F ++L Sbjct: 667 VTISCSPLHAMDGKILGTVTVLQDAEKVHALTEALATQAMQDELTGLLNRRGFMRRLEQA 726 Query: 704 LQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGD 763 + + L+++DLDRFK VND+ GH AGD LL E+A L+ R +D ++RLGGD Sbjct: 727 VGGAGRHDETLCLLYVDLDRFKVVNDACGHDAGDRLLAEVAHLLSQHARLADTVSRLGGD 786 Query: 764 EFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMS 823 EF LLL D + E A +A RI++A+N Y F+ +GR+ GAS G+ + AA ++ Sbjct: 787 EFVLLLHDVDEEQALAVANRIVTALNAYRFVHDGRLFVPGASVGLASVLAGTASAATCLA 846 Query: 824 QADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRI 883 AD AC A+K GR RV VY P A+ R L W S RI Sbjct: 847 WADAACRAAKREGRDRVCVYRPDAASIVDAR----LTTGW----------------SYRI 886 Query: 884 PEARNLWLISL---KLWSCEGEIIDEQTFRR---SFSDPALSH----ALDR-----RVFH 928 E L K+ S +GEI + R S +P H A R R+ Sbjct: 887 QEGLENGYFKLFLQKIVSADGEIFGYEALARFVDSSGEPVGPHMFLSAAKRFDLMTRIDQ 946 Query: 929 EFFQQA-----AKAVASKGIS---ISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLI 980 F QA V +G +S+ L ++ N L+E+L ++ +L + Sbjct: 947 MIFNQALPLLYGLRVKHRGTPCPYLSVNLGARSIADPLFRNWLIERLSDNLDVAAMLWIE 1006 Query: 981 IPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANV 1036 I ++ E V +R G RI L G F+ LK D + +D + +++ Sbjct: 1007 ITELEEINWTEEELAFVAMVRSYGVRIYLDDFGTGYNSFDVLKRIAVDGIKIDRSVTSDI 1066 Query: 1037 QGNLMDEMLI 1046 + + L+ Sbjct: 1067 VSGPISQALV 1076 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 75/307 (24%), Positives = 147/307 (47%), Gaps = 12/307 (3%) Query: 297 ISESETHFRNAMEYSAIGMAL-VGTEG-QWLQTNKALCQFLGYSQEELRGLTFQQLTWPE 354 ++ SE FR A E++ +G+A+ GT G + L N+A C+ +G +++EL G LT + Sbjct: 55 LNRSERIFRAAFEHAPLGLAIHDGTPGARLLGVNEAYCRIVGAARDELIGTEAGHLTAGD 114 Query: 355 DLNKDLQQVEKLISGEINTY-SMEKRYYNRNGDVVWALLAVSLVRHT-DGTPLYFIAQIE 412 D + +Q+ +L + E+ S+ +R+ +G + + VSL+ D + ++ ++ Sbjct: 115 DPHGGFEQI-RLTARELGGRLSLVRRHLRSDGKPLDLRVHVSLLEGAPDAADVSAVSVVQ 173 Query: 413 DINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNW 472 D+ EL T R TLA E IG+W+W+++ + + RM E+ Sbjct: 174 DVTELLETRDALAVSETRATLAIENAQIGLWDWDIELDSVFYSDRMLEILGASHANFTQA 233 Query: 473 QVWYECVLPEDRQHAEKVIRDSLQSRSP-FKLEFRITVKDGIRHIRALANRVL----NKE 527 W + P+D + ++ + RS ++ E R+ DG H + +++R N Sbjct: 234 ADWLARLHPDDVEAYQRAQTAHFERRSEHYECELRVRHADG--HYKWVSDRGKVVRWNDA 291 Query: 528 GEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKM 587 G+ R++G MD+ K+ ++AL + + R ++ + +D + +NPV Sbjct: 292 GKPLRIIGTLMDIDTRKRADQALRESEARFRGIFETTRRFIAVLDPDGRHVAVNPVVHAF 351 Query: 588 SGWTQEE 594 +G + E Sbjct: 352 TGLSAGE 358 >UniRef50_D0J4K1 Diguanylate cyclase/phosphodiesterase with n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0J4K1_COMTE Length = 822 Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 114/337 (33%), Positives = 183/337 (54%), Gaps = 7/337 (2%) Query: 533 LLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQ 592 LL + D+T+ K +L EKERL ITL+SIG+AV+ D ++ F+NP+AE M+GW Sbjct: 243 LLMLVTDVTDRKLAETSLHNEKERLRITLNSIGDAVIATDAEGRVNFLNPIAEAMTGWYG 302 Query: 593 EEALGVPLLTVLHITFGDNGPLMEN-IYSADTSRSAIEQ--DVVLHCRSGGSYDVHYSIT 649 A+GVP+ V+ + +G +++N IY A + + + + CR G +V S Sbjct: 303 RRAIGVPIEQVMPLRDSFDGHVLQNPIYLALKEQRIVGMALNSQIACRDGRVLEVEDSAA 362 Query: 650 PLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNS 709 P+ G G+++V DV+E+R M ++++ A HD LT+L NR + + LQ Sbjct: 363 PIWDQAGKLTGAIIVFHDVSEARAMALKMTHLAHHDPLTNLPNRMLLQDRTSQALQQAGR 422 Query: 710 THQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLL 769 + AL +DLD FK +NDS GH+ GD LL +LA + +R+ D ++R GGDEF +L+ Sbjct: 423 NGGQVALFILDLDHFKTINDSVGHSIGDQLLLQLAKRLQQFVRNGDTISRQGGDEFIILI 482 Query: 770 PDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIA 828 P+ +V+ + R++ A + F+ +G + + S GI+L D+ + AD A Sbjct: 483 PEIRHVDEVSQLGERLLEACAE-PFLLDGVRYDLSMSIGISLYPDDADNQEALYRHADAA 541 Query: 829 CYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRM 865 Y +K GRGR + Q H+ A L+ R+ Sbjct: 542 MYQAKQEGRGRFRFFS--QEIEHTLYARHMLERHMRV 576 >UniRef50_Q67KG5 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67KG5_SYMTH Length = 712 Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 154/538 (28%), Positives = 248/538 (46%), Gaps = 21/538 (3%) Query: 567 AVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFG----------DNGPLME 616 A++ D +I N +E++ G+T++E LG P+ +L G GP Sbjct: 146 ALIATDREQRIVLFNRRSEEIFGYTKQEVLGKPIRALLPELPGPAPGEGKGLNGAGPGAN 205 Query: 617 NIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLR 676 + S + ++V H + G S+ V S+ T G++ VL +++++ R++ Sbjct: 206 GLRSGGHP-ATQGHELVAHHKDGSSFPVEVSVA--VTRAGADELRVLEVRNISGRRRVQA 262 Query: 677 QLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAG 736 L AS DALT L NR +F+ +L L+ R AL+F+DLD K VND+ GH AG Sbjct: 263 ALKRLASQDALTGLYNRRAFQAELERYLELARHHRVRGALLFMDLDLLKYVNDTLGHQAG 322 Query: 737 DALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWE 796 D +L +A ++ + LR D+ AR GGDEF +L+P E+ +A ++ AV F + Sbjct: 323 DQVLVRVAEIIQAHLRPIDIAARHGGDEFAILMPYTGREAVS-VAESLLRAVQQEEFRVK 381 Query: 797 GRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAA 856 GR + AS G+T D+ A +++QAD+A Y +K GR V V++ A Sbjct: 382 GRSVTMTASIGVTFFPDHGLTAEALVAQADMAMYRAKESGRNAVAVFDGTDEQRIEMVAK 441 Query: 857 MSLDEQWR-MIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSD 915 +S D + R ++E++ ++ A + R+ + L+ L+L G +I F Sbjct: 442 LSWDRRLREALREDRFVLYAQPILDLRLGRITRVELL-LRLVDEGGNVIAPGAFLAGAER 500 Query: 916 PALSHALDRRVFHEFFQQAAKAVASKGI-SISLPLSVAGLSSATLVNDLLEQLENSPLPP 974 L +DR V E + A+ I + + LS +S L + E+LE S P Sbjct: 501 FGLIQEIDRWVLREAIRLIAQQEPDSEIEAFEVNLSGKTISDPGLARMIQEELEASGADP 560 Query: 975 RLLHLIIPAEAILDHAESVQK----LRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDG 1030 L L I A + E ++ +R GCR L VG LK DYL +DG Sbjct: 561 SKLVLEITETAAIGDLEQARRFITAMRRLGCRFALDDVGSGFSSLRLLKQLPVDYLKIDG 620 Query: 1031 ELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIA 1088 N+ D+ L+ + A+ G +TIA V + + GVD G ++ Sbjct: 621 AFIRNLPTEDADKHLVRAMVAMARTQGQQTIAEFVDRAETLRLVREFGVDYAQGYLVG 678 >UniRef50_A8H6Y6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=13 Tax=Proteobacteria RepID=A8H6Y6_SHEPA Length = 1064 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 202/862 (23%), Positives = 373/862 (43%), Gaps = 70/862 (8%) Query: 271 LPFLLILLPANIMTMVMYAFRAE--RKHISESETH--FRNAMEYSAIGMALVGTEGQWLQ 326 +P L I ++ ++ + R E R + + H F++ +G+A+ +W++ Sbjct: 169 VPLLAIFPITTVLLGILLSRRIEIERDQKIKLQDHLLFKSHFHSGNMGIAITDIAHEWIK 228 Query: 327 TNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGD 386 N +LCQ L Y+++EL L++ L +D + +++ G IN + ++ ++ Sbjct: 229 VNPSLCQMLKYTEQELLSLSWLDLMSADDFQLYKHHLLRMLDGRINEFELDLCLIAKDET 288 Query: 387 VVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWE 446 +V+ + V+ R L + ++ K E+ E++ L + +G W+W+ Sbjct: 289 IVYTHMTVACQRVQSRVELIITGFLNRTSQ-KEAEKEKLASQEQLGLVLGSSELGFWDWD 347 Query: 447 LKPNIFSWDKRMFELYEIP-PHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSP-FKLE 504 ++ +I ++ L + ++W + + PEDR + I+ L + K+E Sbjct: 348 IRNDIIERNEHCAALLGCDIDTLNRQQKLWGDSIHPEDRVRVLRSIKAHLSGETEQHKVE 407 Query: 505 FRITVKDGIRHIRALANRVL-----------NKEGEVERLLGINMDMTEVKQLNEALFQE 553 +RI R LA+ L ++ G R+ GI+ D+T+ K++ E+L Sbjct: 408 YRI---------RTLASETLWILDSGKVMSRDESGCPLRMCGIHTDITDRKRVEESL--- 455 Query: 554 KERLHITL-DSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNG 612 +L ++ ++ EA+ D I +N ++G+T+ E + +L + +N Sbjct: 456 --KLAASVYNNSREAMSVQDDKGLIININAAFTDITGYTESEVKNQNI-KILQCS-RNNR 511 Query: 613 PLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESR 672 E ++ A + +V L ++G + V ++ L + V + D+TE + Sbjct: 512 SAYEQMHMAVEEEGRWQGEVWLRRKNGEEFVVWLTLNALFDAEAQTQRHVALFSDITEKK 571 Query: 673 KMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAG 732 + + + A++D LT L NR L + +S Q AL+F+DLD FK VND+ G Sbjct: 572 QAEKIIWKQANYDTLTGLPNRRMLLDYLNAEILKSDSREQHFALMFLDLDYFKEVNDTLG 631 Query: 733 HAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD-CNVESARFIATRIISAVNDY 791 H GD LL E A + + +R SDV+ARLGGDEF ++L +++ +A I++ + + Sbjct: 632 HDMGDMLLSEAAKRLKACIRDSDVVARLGGDEFTIVLSGVTDIKGVDKVAKHILTRIAEP 691 Query: 792 HFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEP--QQAA 849 + + E + + AS GITL D+ ++ AD A YA+K+ GR R + P Q+ A Sbjct: 692 YNLGEETAY-ISASIGITLYPDDASTIEGLLKHADQAMYAAKDEGRNRFHYFTPSMQRYA 750 Query: 850 AHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQTF 909 + R L I +++ + + S + L +L W + Sbjct: 751 KYRMRLIQDLRS---AIADHEFELYYQPIVS--LQGGLGLKAEALIRW---------RHP 796 Query: 910 RRSFSDP------ALSHALDRRVFHEFFQQAAKAVA----SKGISISLPLS---VAGLSS 956 +R P A L + + FQQAA+ A GI + + ++ V Sbjct: 797 KRGLVSPIEFIAVAEETGLIIEIGNWVFQQAARQSALWRDRFGIEVQISINKSPVQFRDE 856 Query: 957 ATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQ----KLRLAGCRIVLSQVGRDL 1012 +N + L+ L + + I +LD ++ + R +G +I L G Sbjct: 857 GESINSWVNLLKTLNLTNNNICIEITEGLLLDGNSAISSKLTQYRDSGIQISLDDFGTGY 916 Query: 1013 QIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMD 1072 LK D+L +D N+ N D L I A +LGMK IA V Sbjct: 917 SSLAYLKKFDIDFLKIDQSFTRNLDSNSDDFTLCEAIIVMAHKLGMKVIAEGVETDYQRK 976 Query: 1073 TLSGIGVDLIYGEVIADAQPLD 1094 L+ G D G + + P++ Sbjct: 977 ILANAGCDFGQGYLFSRPVPVE 998 >UniRef50_B4W8V0 Sensor protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W8V0_9CAUL Length = 647 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 102/247 (41%), Positives = 143/247 (57%), Gaps = 6/247 (2%) Query: 303 HFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQ 362 F A+E+S IG A+ G +G WL N AL +FLGYS +ELR + F+ +T P+DL+ DL Sbjct: 16 QFCQAVEHSPIGTAVFGLDGVWLNGNAALRRFLGYSSDELRTVNFRDVTHPDDLDADLVL 75 Query: 363 VEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQ 422 E+L SG I +Y +EKRY ++G V WA VSLVR G PL++I+ ++DI K E Sbjct: 76 FEQLTSGRIPSYEIEKRYIRKDGGVAWAARTVSLVRSAAGEPLFYISHVQDIAGRKAAEA 135 Query: 423 VNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPE 482 +L +R TLA A IGIWE +L N SW MF+L+ P + + VL + Sbjct: 136 ERLKLADRATLAARAAHIGIWELDLNTNALSWSPEMFDLFLTPAPDVLDLAFFTSFVLED 195 Query: 483 DRQHAEKVIRDSLQSRSPFKL--EFRITVKDG-IRHIRALANRVLNKEGEVERLLGINMD 539 DR E + RD+ + + L EFRI DG IRHI+ + G +RL+G N D Sbjct: 196 DR---ETLQRDTAAALNGLLLDTEFRIRRTDGEIRHIKGFGSLERGVGGAPDRLVGANWD 252 Query: 540 MTEVKQL 546 +TE+++L Sbjct: 253 VTEMRRL 259 >UniRef50_Q1PXY5 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PXY5_9BACT Length = 829 Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 147/531 (27%), Positives = 245/531 (46%), Gaps = 25/531 (4%) Query: 567 AVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRS 626 A+V D+A I +NP +++G+ +EEALG L +L D ENI + S Sbjct: 294 AIVITDVACAIEHVNPKFTEVTGYAREEALGNKLFDLLLFNMSD--ERHENIITMVLSGE 351 Query: 627 AIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDA 686 +++V + G + +I+ + DG I + VI+D+TE +K L A HD Sbjct: 352 IWRKELVNSRKDGEQFFAQVTISAVRGDDGYIINFIGVIEDITERKKFEEMLVVMAEHDP 411 Query: 687 LTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASL 746 LT+L NR F+ +L L + AL+F+D+D FK +ND+ GH GD +L E A L Sbjct: 412 LTNLFNRRRFQVELEYWLGYSKRYNTGGALLFLDIDNFKYINDTLGHKVGDEILVEFAIL 471 Query: 747 MLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASA 806 + +R +D++ARLGGDEF ++LP+ NV+ AR A +I + + + R H + S Sbjct: 472 LKERVRPNDIIARLGGDEFAVILPNTNVDHARSFAEQITQSAQKHFRVLNERGHNITTSL 531 Query: 807 GITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWR-M 865 GI L D++ +A +++ AD+A Y +K G+ + ++ +Q R D++ R Sbjct: 532 GIALFPDHSLEADALLACADMAMYGAKEAGKNQCCIFSLEQKQNIESR--FLWDKRIRSA 589 Query: 866 IKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDR- 924 + ++ + + R A + L++ GE+I F +DR Sbjct: 590 LGKDDFEIYLQPIVDLR-SNAVFGYEALLRMVGENGELIPPAEFLPYAERHGSILDIDRW 648 Query: 925 ------RVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLH 978 R+F + Q KAV + + LS ++ + +++ + E+L S R + Sbjct: 649 VVRNAFRLFVRYNMQEKKAV------LEINLSGKAITDSGMLSFIKEELSASQADARYIT 702 Query: 979 LIIPAEAILDHAESVQ----KLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCA 1034 + A++++ E + L G R L G F LK D+L +DG Sbjct: 703 FEVTESAVVENIEYARYFMNDLCNQGFRFALDDFGIGFCSFTYLKHLPVDFLKIDGGFIR 762 Query: 1035 NVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGE 1085 N+ N D+ + I L K IA V + L IGV +YG+ Sbjct: 763 NLPDNPTDQCFVKAIADIGNGLEKKIIAEFVENKQTISLLKEIGV--VYGQ 811 >UniRef50_C5BTG9 PAS/GGDEF/EAL domain protein n=2 Tax=Gammaproteobacteria RepID=C5BTG9_TERTT Length = 836 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 155/584 (26%), Positives = 270/584 (46%), Gaps = 41/584 (7%) Query: 539 DMTEVKQLNEALFQEKERLH-ITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALG 597 + E Q +E+ F+ H + LD++ V+ +D +I F+N ++G+ + +LG Sbjct: 265 EKVESLQRSESDFRHISETHQLLLDNLQTVVMELDADFRIRFLNVPWRGLTGYDLDASLG 324 Query: 598 VPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVH---------YSI 648 L F D+ S A Q+V+ R ++ ++ Sbjct: 325 CKLT---QFVFDDDD-------SYGVGLEAKLQEVLSGARELAELELCLLDSRGQKLWAQ 374 Query: 649 TPLSTLDGSNIGSVLVIQD-VTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTV 707 + + N S+ V D +T+ ++ RQL Y A HD+LT L NR FE+ LR Sbjct: 375 VKIRRSENHNAASLTVCLDNITKRKEAQRQLEYLAMHDSLTGLFNRHYFEESLRQSFADA 434 Query: 708 NSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGL 767 ++H L++IDLD FK +ND+ GH GD +LR++A LM +R++D+L RLGGDE+ + Sbjct: 435 IRNQRQHGLIYIDLDYFKVINDTFGHHEGDEVLRQVAHLMKRRIRAADLLCRLGGDEYAV 494 Query: 768 LLPDCNVESARFIATRIISAVNDYHFIWEGRVHRV--GASAGITLIDDNNHQAAEVMSQA 825 L+ D + IA + + VND F+++ + HRV G S G+++ID A E + QA Sbjct: 495 LVHDVCSKKLLEIARELQAIVND--FVYQAKNHRVNLGCSIGLSVIDGEAVCAEEYLMQA 552 Query: 826 DIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRM-IKENQLMMLAHGVASPRIP 884 DIA Y +K GR + +Y+PQ + R+ ++ ++ R I E+++++ V Sbjct: 553 DIALYVAKGRGRNLIHLYDPQDQESEELRSRINWTQRMRKAISEDRIVLHFQPVF----- 607 Query: 885 EARNLWLIS----LKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS 940 +A N ++ +++ EG ++ F + + H LDR + + + Sbjct: 608 DAHNKNIVYYEALVRMRDEEGNLVYPNQFIPALENTGEMHLLDRWIVKLAIRSVRECKKI 667 Query: 941 KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH----AESVQKL 996 + ++I+ LSV LV + E L + + P + + A L + + +L Sbjct: 668 ERVAIN--LSVQAFKDENLVPVVKEALAVNGVAPECVTFELTESASLFNLAITRNMITQL 725 Query: 997 RLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRL 1056 GC + G F LK A ++ LDG N+ + +D+ L+ + Q L Sbjct: 726 NEIGCTFAIDDFGSGFSSFAYLKELPAHFIKLDGSFIKNLHQDDVDKALVRSLIQVVQAL 785 Query: 1057 GMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNSS 1100 G K +A V ++D L GVD + G P + L++ Sbjct: 786 GKKAVAEFVENEQILDILRKFGVDCVQGYHTGRPVPFESLMDEC 829 >UniRef50_B8GN37 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GN37_THISH Length = 803 Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 162/575 (28%), Positives = 268/575 (46%), Gaps = 45/575 (7%) Query: 537 NMDMTEVKQLNEALF----QEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQ 592 +++TE + E L QE+ RL L ++ V+ ++ + NP + + G + Sbjct: 232 EVELTEAHRQAERLTGLARQEQGRLRSLLSAMNIGVLFETHDHRVEYYNPAFQNIWGIPR 291 Query: 593 EEAL-GVPLLTVL----HITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYS 647 + L G+P VL H + + DT S+ + L + G S Sbjct: 292 DTNLTGMPTQDVLELAAHFESRPDHSSRHILQVLDTHESSERFETEL---NDGRLITQIS 348 Query: 648 ITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTV 707 P+ DG+++G + + +DVT R+ QL Y A HDALT L NR FE++L + + Sbjct: 349 Y-PVLDNDGNSLGRLWIYEDVTHERQTAEQLLYLAEHDALTGLCNRHCFEQRLEKAMASA 407 Query: 708 NSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGL 767 H R AL++ DLD FKA+NDS GH AGDA+L +AS + ++R D+LAR+GGDEF L Sbjct: 408 QRHHHRLALLYFDLDEFKAINDSFGHRAGDAVLVRVASELAPVVRGGDMLARVGGDEFAL 467 Query: 768 LLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADI 827 L ++E AR +A R+ V F + G R AS GI + ++ +++++ADI Sbjct: 468 LTQIDSIEEARSLAARLCGTVAKIPFRFRGTGVRSTASVGIAVYPEHGETTEDLVARADI 527 Query: 828 ACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMM-------------L 874 A Y +K G+ +VY+P++ + + +S ++ RM E L++ L Sbjct: 528 AMYQAKGLGKNTWSVYDPERDRSEAVAERLSWGDRIRMALEQDLLLLHYQGVYDAASGEL 587 Query: 875 AHGVASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQA 934 H A RI + R+L I L + I E+T L ALDRRV Q Sbjct: 588 VHMEALARIRDPRDLERI---LMPGQFVPIAEKT--------GLILALDRRVLELGIAQL 636 Query: 935 AKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQ 994 A ++++ +S L + + E + + P L + + A + + Q Sbjct: 637 ADNPDMPPLAVN--ISGRSFDDPALADAIRELIARHRVDPSRLIIELTETAAVSEIQEAQ 694 Query: 995 KL-----RLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITII 1049 + RL GC++ L G F LK D L +DG ++ + +++ + + Sbjct: 695 RFIESMHRL-GCKVCLDDFGAGFSSFAYLKYIDVDMLKIDGMFVRDLTRDRENQVFVRAM 753 Query: 1050 QGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYG 1084 A+ LG +T+A V ++ L+ +GVD+ G Sbjct: 754 VDVAKGLGKRTVAEFVEDAATLEMLNTLGVDMAQG 788 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 193/776 (24%), Positives = 334/776 (43%), Gaps = 40/776 (5%) Query: 308 MEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLI 367 +E++ + ++ EG+ + N+A YS E+ G PE+ + + Q E Sbjct: 412 LEHAGALVVVLDREGRIRRFNRACEALTQYSFSEVEGRQVWDFIPPEE--RRIVQDEAFA 469 Query: 368 ----SGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQV 423 E + ++ + R+G + S++ G + +A D+ + R E Sbjct: 470 VLFNDPEQSRSTLTNHWVARDGGRRLIEWSNSVLHDAQGKVEFVVAVGNDVTDKMRAEAA 529 Query: 424 NQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI-PPHIKPNWQVWYECVLPE 482 ++ R+ A +G W +L W MF ++E +++ + + + PE Sbjct: 530 LKESESRLKEAQRIAQVGSWALDLVTGKLIWSDEMFRIFETDEAAFGQSYEAFLDALHPE 589 Query: 483 DRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLNKEGEVERLLGINMDMT 541 DR+H K S+ + +P+ L R+ + DG ++ + K G+ G D+T Sbjct: 590 DREHVNKAYMHSVTNHTPYDLVHRLLLPDGRVKWLHGRGETRYGKNGDPIASCGTVQDIT 649 Query: 542 EVKQLNEALFQEKERLHITL-DSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPL 600 K+ +AL RL+ ++ + GEA++ D A I +NP ++G+ ++ G Sbjct: 650 ARKKQEDAL-----RLYASIFEHSGEAILIADQARHIIAVNPAFTNLTGYALDDIRGE-- 702 Query: 601 LTVLHITFGDNGPLMENIYS---ADTSRSAIEQDVVLHCRSGGS-YDVHYSITPLSTLDG 656 T G E Y A ++ Q ++ R G+ Y +++ + DG Sbjct: 703 ----EPTILAGGQASEESYRSTWASLEQTGYWQGEIIDRRKDGTLYPKWMAVSVVRDADG 758 Query: 657 SNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHAL 716 V D+TE + Q+ + A HD LT L+NR S + QL L + A+ Sbjct: 759 VLTHYVASFTDITERKLAEAQIKHLAYHDPLTGLSNRFSLQTQLDQTLALARREQRTLAV 818 Query: 717 VFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVE 775 VF+DLDRFK++NDS GHA GD LL E+A + +R SD++ARLGGDEF ++L + + Sbjct: 819 VFLDLDRFKSINDSLGHALGDQLLVEVARRLRDNVRDSDIVARLGGDEFVVVLTEVGDAA 878 Query: 776 SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNG 835 A +A +++ A+ + I +H AS GI+L + A +M AD A Y +K+ Sbjct: 879 GAARVADKLLGALVPRYRIGGHALHTT-ASIGISLYPHDGDDADALMKNADTAMYHAKSQ 937 Query: 836 GRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRI--PEARNLWLIS 893 GR V + P+ + +R + D R+ E L + P+I R + + + Sbjct: 938 GRDNVQFFTPEMNQSVLKR--LQFDHDLRVAVEAGQFELHY---QPQINSTSGRVVKVEA 992 Query: 894 LKLWSCEGE-IIDEQTFRRSFSDPALSHALDRRVFHEFFQQAA--KAVASKGISISLPLS 950 L W E ++ F + L L V +E +Q + +++++ LS Sbjct: 993 LVRWQHPREGLVSPAEFIPIAEETGLILPLGEWVLNEACRQLRLWRDAGITDLTVAVNLS 1052 Query: 951 VAGLSSATLVNDLLEQLENSPLPPRLLHL-IIPAEAILDHAESV---QKLRLAGCRIVLS 1006 L S L+ + L N L L L I + A+ D S+ Q LR G + + Sbjct: 1053 AHQLHSPALIPMVARTLGNHGLEGADLCLEITESVAMRDTTASIAQLQALRDLGIHLSID 1112 Query: 1007 QVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIA 1062 G + LK D L LD ++ N D + A LG++ +A Sbjct: 1113 DFGTGYSSLSYLKLLPIDTLKLDQSFVCEIEFNPSDVAICAATIALAHSLGLEVVA 1168 >UniRef50_A8VRC4 Putative diguanylate cyclase n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VRC4_9BACI Length = 650 Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 153/545 (28%), Positives = 253/545 (46%), Gaps = 49/545 (8%) Query: 321 EGQWLQTNKALCQFLGYSQEELRG--LTFQQLTWPEDLNKDLQQVEKLISG-EINTYSME 377 +G ++++ LGY EE+ G + + E E L G EI +ME Sbjct: 59 DGMHTYISQSVKNVLGYEPEEIIGKKMIYDMCVENERDEAKAFTTELLAEGREIG--NME 116 Query: 378 KRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEA 437 R ++G V+W L+ G F DI E K E ++ + ER + Sbjct: 117 MRQAAKDGRVIWVLINGRPTYDQAGNRTGFRGLDIDITERKHAEFSSRAIKERYHSIMKI 176 Query: 438 GGIGIWEWELKP----------NIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHA 487 G+WE++ + ++ +D F ++P +++ + W + + PED+ A Sbjct: 177 SNTGVWEYDHRSEKLWCSEEYFSMLGYDTTAFR-NDVPGNLE---EAWGDLICPEDQAVA 232 Query: 488 EKVIRDSLQS--RSPFKLEFRITVKDGIRH-IRALANRVLNKEGEVERLL-GINMDMTEV 543 + D S S ++ FR+ K G I + + + +G ++ G+++D+TE+ Sbjct: 233 RQQFSDYFHSDTESLYENVFRMKRKGGTYSWIWSRGKMLRDTDGRPSGMIIGLHIDITEM 292 Query: 544 KQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTV 603 K+L AL+ EKE+ TL SIGE V+ + + +I MN VAE+++GWTQEEA G L V Sbjct: 293 KKLESALYLEKEQFKTTLLSIGEGVISTNKSGEIEVMNQVAEELTGWTQEEAKGRSLAQV 352 Query: 604 LHITFGDNG-PLMENIYSADTSRSAIEQD--VVLHCRSGGSYDVHYSITPLSTLDGSNIG 660 I G P+ + +S +E L R+G Y + +TP+ G G Sbjct: 353 YVIKDELTGEPVTDLADRVISSGETLEMSGGKTLRSRNGTEYPIEDQVTPIRNRRGIPSG 412 Query: 661 SVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFID 720 V+V +D +E ++ ++ Y + HD LT L NR FE++ L++T + + +V +D Sbjct: 413 VVIVFRDFSEQKRRNLEIEYLSYHDQLTGLYNRRFFEEE---LIRTDSHRNLPFTIVMLD 469 Query: 721 LDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARF- 779 ++ K +ND+ GH AGDALL + + + R DV+AR+GGDEF +LLP + E A Sbjct: 470 VNGLKLINDAFGHHAGDALLLKATEALKNTFRDHDVIARIGGDEFAVLLPGISPEVAENR 529 Query: 780 -------IATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYAS 832 +A ++I VN V S G + E++ +AD Y Sbjct: 530 LNRLKNDLAMKMIKGVN------------VSISTGFATKQNETEDIYEILRKADHQMYQD 577 Query: 833 KNGGR 837 K R Sbjct: 578 KVSNR 582 >UniRef50_A8GZL9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Shewanella RepID=A8GZL9_SHEPA Length = 857 Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 147/566 (25%), Positives = 269/566 (47%), Gaps = 29/566 (5%) Query: 543 VKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLT 602 + QL ++L++++ + +TL+ I EAV+ D+ +++++NP AE++ + +A G Sbjct: 294 INQLLDSLYRQESQSQVTLEFIAEAVILTDIHCEVSYINPYAERLLQLSNAQAQG----K 349 Query: 603 VLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSV 662 +H N L + + + S S + L + S+ S G IG+V Sbjct: 350 RIHELLPGNQSLSDKVNAFMQSPSLSIDSIFLRLNCDSPKLLSASLAHFSNHSGEIIGAV 409 Query: 663 LVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLD 722 LV++D T+ + RQL + D +T L NR +FE++ Q+ S A+V++DL+ Sbjct: 410 LVLKDTTQEALLKRQLQRQSYLDPVTGLLNRTTFEERFMGYAQSSQSL----AVVYLDLE 465 Query: 723 RFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIAT 782 +FK +NDS+GHA G+ +L+++A ++ S L + +L R+GGDEFGL++ D + + + Sbjct: 466 QFKLINDSSGHAIGNKMLKKVARVIESCLSDNMLLGRIGGDEFGLIVRDSSALAVAKLIK 525 Query: 783 RIISAVNDYHFIWEGRVHRVGASAGITLIDDN-NHQAAEVMSQADIACYASKNGGRGRVT 841 +II+ V +RVG S G+ L N + ++ ADIAC A+K G +V Sbjct: 526 KIIAGVGCQTVTHNDTCYRVGVSVGVALSRVNKDTDLLGLLKDADIACLAAKRKGCNQVH 585 Query: 842 VYEPQQAAAHSERAAMSLDEQW-----RMIKENQLMMLAHGVASPRIPEARNLWLISLKL 896 Y+ + +R A +W + I+ N+L++ + R I L++ Sbjct: 586 FYDGRDIDLSYQRNA----PKWAVRIVQAIEHNELILYYQKIKCLSSHSHRQRLEILLRI 641 Query: 897 WSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGI----SISLPLSVA 952 G I+ F + L +D+ V + F + ++G+ +S+ LS + Sbjct: 642 QEPGGRILPPAQFIAAAESFKLIVDVDKEVIRKTFLWLS---LNEGLWDDHCLSINLSGS 698 Query: 953 GLSSATLVNDLLEQLENSPLPPRLLHL-IIPAEAILDHAESVQ---KLRLAGCRIVLSQV 1008 L + +V+ +L Q + +P + I AI + + +++ LR G L Sbjct: 699 SLGAEGMVDFILSQQKRFGVPSSCICFEITETSAIQNRSRAMKMLLDLRKRGFAFALDDF 758 Query: 1009 GRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLP 1068 G + LK DY+ +DG N+ N D ++ + + +G++T+A V Sbjct: 759 GSGFASYGYLKEMPVDYVKIDGCFVKNLASNAKDYAIVKSVNDVCRVMGIETVAEFVENQ 818 Query: 1069 LVMDTLSGIGVDLIYGEVIADAQPLD 1094 ++D L IG++ G I QPLD Sbjct: 819 EIIDKLEVIGINYAQGYGIGRPQPLD 844 >UniRef50_A8FYM5 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FYM5_SHESH Length = 1055 Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 209/886 (23%), Positives = 373/886 (42%), Gaps = 129/886 (14%) Query: 12 LPHPLLHLVSLGLVSFIFTL-----FSLELSQFGTQLAPLWFPTSIMMVAFYRHAGRMWP 66 L H L +L +SF++ L SL Q G ++P+W PT I + A R+WP Sbjct: 6 LKHHLRYLALCATLSFVYYLSGRLGLSLAFEQAG--VSPVWPPTGIAISAVLIFGFRVWP 63 Query: 67 GIALSCSLGNIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQ-NLADWL 125 GI L L N++ + L FS + L N +EA+V LL + Y Q N W Sbjct: 64 GIMLGALLVNLSIA-LPFSAAIL---IALGNTLEAIVAGYLLIRCAERYPFTQVNHTAWF 119 Query: 126 RLALGSAIVPPLLGGVLVVLLTPGDDPLRA------FLIWVLSESIGALALVPLGLL-FK 178 + A++ P+ + ++ + + A + W L + +GAL +VPL L F+ Sbjct: 120 ---IAIAVMAPMFSATIGLVSLSMHNLIEASELGIVWSTWWLGDIVGALVIVPLLLTWFR 176 Query: 179 PHYLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPW-----PFTFIIV----LLMWSAVR 229 PH + P + +++ L L +++ PW P +I LL+W+A+R Sbjct: 177 PHESMNGGVPVMALWGTCLVSLGLAL----LIFSPWHTEYDPHQLLIFMMLPLLIWTALR 232 Query: 230 LPRMEAFLIF--LTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVM 287 + L+ + + + ++ P ++ + L++ + +++ + +++ Sbjct: 233 FHHRGSTLLVTVFSGIAISGTLVGYGPFVMESTNQSLLTLQASVGAIMVTI------LIL 286 Query: 288 YAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQT-NKALCQFLGYSQEELRGLT 346 A + ERK ++ + +E A VG L T NK L Q + +++ G T Sbjct: 287 IASQEERKRVNRRLLQVQQDLE------AKVGQRTHELYTSNKQLAQEV--TRQHQLGET 338 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 + L + + Q ++ + N Y G Sbjct: 339 LKSLLNATNFTSNDQFLQSCVKDLANAY---------------------------GAYFA 371 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP 466 FI D K + + TLA +W + + FS+ R + Sbjct: 372 FIGIFSD----KTCQSIK-------TLA-------VWAGDKVEDNFSYRLRGTPCEDAMN 413 Query: 467 H----IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANR 522 H I + Y PED+ + + L+ S F + I I + + Sbjct: 414 HNVELISSRAALHY----PEDK------LLNELEVDSYFGAPLVAPSGETIGIIAVMDKK 463 Query: 523 VLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNP 582 ++ E V+ +LG+ + ++ ++ +E E EA+V D KI +NP Sbjct: 464 AMDIEEWVKPVLGLFANRVALELQRQSTHKEMEMAASVFKESAEAIVICDSEDKILRVNP 523 Query: 583 VAEKMSGWTQEEALG-VPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHC----- 636 K++G++Q E +G P L + P+ +++ + +A++++ + C Sbjct: 524 AFYKITGYSQIEVVGQSPQL------LQSDRPIQSMLHNRE---AALKKNDIWQCEVSGY 574 Query: 637 RSGGSYDVHY-SITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYS-ASHDALTHLANRA 694 R G + + + ++ P+ +G + + D+TE RK+ + Y+ A HD+LT L NR Sbjct: 575 RKNGEHFLSWQTVIPVKDENGDTQQIIYIFSDITE-RKLFEEHIYNLAHHDSLTQLPNRV 633 Query: 695 SFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSS 754 +F+ Q+ L+ + + A++FIDLD FK +ND++GH GD LL+++A LR Sbjct: 634 AFQLQMNTALERAKRSKTQMAVMFIDLDHFKMINDTSGHPVGDLLLQQVAERFKRALRKE 693 Query: 755 DVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDN 814 DV++R GGDEF +LL + ++A + R + A F + AS GI + DN Sbjct: 694 DVISRFGGDEFTVLLSNTRTDNATTVVARKLLACFYEPFKLPSSEVVISASIGIGVFPDN 753 Query: 815 NHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLD 860 +M AD A Y +K GR Y + ER + LD Sbjct: 754 GDSVDSLMMNADSAMYRAKEKGRNCFQFYTKEMNQYAQERLELELD 799 >UniRef50_B8GTG0 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GTG0_THISH Length = 845 Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 162/565 (28%), Positives = 261/565 (46%), Gaps = 43/565 (7%) Query: 547 NEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQ-EEALGVPLLTVLH 605 ++A+ +R L+S G+ + +D +ITF+NP A ++ G +E LG + H Sbjct: 260 HKAVALSHQRQAAILESAGDGIYGVDREGRITFINPAACRILGIRDPDEVLGQSAHVLFH 319 Query: 606 ITFGDNGPL------MENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNI 659 P+ + Y++ E V RSG V SI PLS + Sbjct: 320 GINRQGRPVPPERCPLSQAYASGEVMGGWE--TVFRHRSGRLIPVAGSIHPLSDAFRES- 376 Query: 660 GSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFI 719 GSV+ QDV+E M QL + A HD L L NR E+ L +T R AL+ + Sbjct: 377 GSVVAFQDVSERNAMEAQLHWQAEHDELIGLYNRRYLERSLEAEQARCQATGHRSALLLL 436 Query: 720 DLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARF 779 DLDRFK +ND+AGH GD+LL E++ + + L VLARLGGDEF ++LP + ++ Sbjct: 437 DLDRFKYINDTAGHPVGDSLLVEVSHRLRAHLGEGPVLARLGGDEFAVILPQTDPQALEK 496 Query: 780 IATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGR 839 ++ + +++ F + R +R+ S G + + AA+V++ ADIAC+A+K GR + Sbjct: 497 LSGGLRRLLHESTFRVDERNYRLNLSIGAAWLGNARETAADVLASADIACHAAKRAGRNQ 556 Query: 840 VTVYEPQQAAAHSERAAMSLDEQW-----RMIKENQLMMLAHGVASPRIPE--ARNLWLI 892 VY+P + ERA M D W +++NQ + + P +P+ +R + + Sbjct: 557 FHVYDPNR----DERAFMGRDLAWADRLREALQQNQFQLHYQPIL-PVMPQTTSREHYEV 611 Query: 893 SLKL------WSCEGEIIDEQTFRRSFSDPALSH-ALDR--RVFHEFFQQAAKAVASKGI 943 L+L + G+ I R P + ALDR V + Q + V Sbjct: 612 LLRLEIAPQVLTLPGDFI--PVAERFGLMPEIDAWALDRALAVLRDLHGQGREVV----- 664 Query: 944 SISLPLSVAGLSSATLVNDLLEQLENSPLP-PRLLHLIIPAEAILDHAES---VQKLRLA 999 +L LS LS + + +++ S L L+ I AIL+ A + + +LR Sbjct: 665 -FNLNLSGRTLSDIPTLERIRDRVLGSGLDLTCLVFEITETCAILNLAAARAFIDRLRAH 723 Query: 1000 GCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMK 1059 G R L G + LK D + DG+ + + D ++ + +G+K Sbjct: 724 GVRFALDDFGTGFCSMSHLKQLPVDVVKFDGQFVRELHLDATDRAMVAAMNDIVHAMGLK 783 Query: 1060 TIAGPVVLPLVMDTLSGIGVDLIYG 1084 ++A V P V+ L +GVD + G Sbjct: 784 SVAEYVEGPEVLACLQAMGVDYVQG 808 >UniRef50_A6FHQ7 PAS sensor diguanylate cyclase and phophodiesterase (Fragment) n=2 Tax=cellular organisms RepID=A6FHQ7_9GAMM Length = 950 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 137/473 (28%), Positives = 228/473 (48%), Gaps = 46/473 (9%) Query: 650 PLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNS 709 ++ +DGS + + T+ ++ +L A +D LT L NR+ FEK + L+ S Sbjct: 494 DITVIDGSFVNT-------TKRKQHEIKLESIAKYDQLTGLVNRSHFEKLVGASLEANRS 546 Query: 710 THQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLL 769 + + L+++DLD+FK VND GH GD+LL+++ ++ S L S +LARLGGDEFG+LL Sbjct: 547 VLEDNILLYLDLDQFKLVNDICGHDVGDSLLKKITVVLKSFLDESAILARLGGDEFGILL 606 Query: 770 PDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIAC 829 N ++A +A I + D+ F GR +G S G+ +D++ ++ +S AD AC Sbjct: 607 NHTNFDNALEVADTIRCGIEDFRFTHNGRHFVLGVSIGVVTLDESIENFSQALSLADTAC 666 Query: 830 YASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQW-----RMIKENQLMMLAHGVA--SPR 882 + +K GR RV VY + M +W + EN+ + + S Sbjct: 667 FTAKEQGRNRVHVYSKCNDVMLGHQREM----RWIGVLREALDENRFELAFQTIKPLSAS 722 Query: 883 IPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKG 942 I E + I L+L +G + F + + LDR V + Q + Sbjct: 723 IKEGYR-YEILLRLRDEDGNLQSPSEFIAAAENYNFMSQLDRWVVKTYCQWLS------- 774 Query: 943 ISISLPLSVAGLSSA-------TLVN-DLLEQLENSPL-----PPRLLHLIIPAEAILDH 989 S P +A LSSA +LV+ + +EN+ L P +L I ++AI+D Sbjct: 775 ---SNPKHLANLSSASINLCGQSLVDRSMHSYIENTILTYGIPPEKLCFEITESQAIMDF 831 Query: 990 AESV---QKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLI 1046 +++ K + GCR L G ++ +K D L +DG N++ + +D ++ Sbjct: 832 DQTILFMNKFKALGCRFSLDDFGSGFSSYSYIKRLPIDQLKIDGSFVKNIETDNVDYTMV 891 Query: 1047 TIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIAD-AQPLDLLVN 1098 A+ + +KT+A V + + LSGIG+D + G +IA A +DL+ N Sbjct: 892 KSFNEIAKAVNIKTVAEYVENENIKNILSGIGIDYVQGYLIAKPALLVDLVDN 944 >UniRef50_Q0A9L9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A9L9_ALHEH Length = 494 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 106/295 (35%), Positives = 171/295 (57%), Gaps = 5/295 (1%) Query: 547 NEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHI 606 EALFQ+ ER +TL+SIG+AV+ D +T++NPVAE ++GW+++EA PL TV I Sbjct: 174 EEALFQKAERARVTLESIGDAVLVTDSLGYVTYLNPVAETLTGWSRDEASAQPLATVFKI 233 Query: 607 TFGDNGPLMEN--IYSADTSRS-AIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVL 663 G G N + + + R+ + + +L R GGS + S P+ +G G+V+ Sbjct: 234 VDGAAGEFALNPAVTAMNEDRTVGLVANCILLQRDGGSIGIEDSAAPIHDRNGRVTGAVI 293 Query: 664 VIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDR 723 V +DV+ SR + ++++Y A HD+LT L NRA ++L L ++ AL+F+DLD Sbjct: 294 VFRDVSLSRSVTQKMAYLAHHDSLTGLPNRALLAERLGRALGAARRHDRQLALLFLDLDH 353 Query: 724 FKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNV-ESARFIAT 782 FK +ND+ GH GD LR A + +R +D ++RLGGDEF +LL + + + A IA Sbjct: 354 FKRINDTMGHDIGDHALRGTAYRLSDCVRETDTVSRLGGDEFVVLLEEIDSPDDAAHIAE 413 Query: 783 RIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGR 837 ++++A+ + + + +V AS GI++ + A + +AD A Y +K GR Sbjct: 414 KVLAAITAPLHVGDHTL-QVSASIGISIFPQHGADAETLHQRADAAMYQAKAKGR 467 >UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultured bacterium RepID=Q20JY5_9BACT Length = 874 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 172/608 (28%), Positives = 279/608 (45%), Gaps = 42/608 (6%) Query: 510 KDGIRHIRALANRVL-NKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAV 568 KDG + L + ++ N +GE ++ D+TE KQ EAL + +ER I L+S + V Sbjct: 270 KDGTTFLVWLMSEIVKNAKGEPFAIVTSCEDITERKQAEEALRKSEERYRIVLESAPDPV 329 Query: 569 VCIDMAMKITFMNPVAEKMSGWTQEEALG--VPLLTVLHITFGDNGPLMENIYSADTSRS 626 V D K+ + NP ++ GWT +E++G + L V ++ +N + E I T S Sbjct: 330 VVYDTEGKVAYFNPAFSRVFGWTLDESIGRNIDFLPVENVP--ENKLIFEKINCGKTL-S 386 Query: 627 AIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNI--GSVLVIQDVTESRKMLRQLSYSASH 684 IE +C + V +I+ D + GS++ +QD+TE +K ++ + A H Sbjct: 387 GIE----TYCLTKDGKKVGVNISGAGFFDNHDKLQGSIITLQDITERKKTEEEIKFLAYH 442 Query: 685 DALTHLANRASFEKQLRI-LLQTVNSTHQRH-------ALVFIDLDRFKAVNDSAGHAAG 736 D LT L NR SF +L L+++ + R AL F+D+DRFK VND+ GH G Sbjct: 443 DVLTGLLNRKSFYTRLEDELIRSYSYDGDRRRIKGHKWALFFLDVDRFKYVNDTLGHDVG 502 Query: 737 DALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC--NVESARFIATRIISAVNDYHFI 794 D LL+ +A + + LR SD + RLGGDEF ++L D + + A+ +A +I A+ I Sbjct: 503 DELLKVVAVRLKNCLRKSDYIFRLGGDEFTIILNDLTDDTDMAK-VAQKIRKAIARPCRI 561 Query: 795 WEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRG-RVTVYEPQQAAAHSE 853 + ++ + S GI++ D+ ++ ADIA YA+K +G R + E + E Sbjct: 562 KDHELY-ITVSIGISIYPDDGDDVETLVKNADIAMYAAKEENQGYRFFIEEMNRKTL--E 618 Query: 854 RAAMSLDEQWR-MIKENQLMMLAHGVASPRIPEARNLWLIS--LKLWSCEGEIIDEQTFR 910 R M L+ R ++ +QL++ P + + + L+ E +I F Sbjct: 619 R--MMLENNLRNALQHDQLIIYYQ----PLVDSTNQIVGMEALLRWHHPELGLISPSQFI 672 Query: 911 RSFSDPALSHALDRRVFHEFFQQAAK--AVASKGISISLPLSVAGLSSATLVNDLLEQLE 968 + L + + V QQA K + +++ LSV LV + + LE Sbjct: 673 PLAEETGLIVPIGKWVLRCACQQARKWHEMGYTRFYVAVNLSVRQFREPDLVETIEQILE 732 Query: 969 NSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMAD 1024 + LPP L L + I++H E ++ LR G + G + LK D Sbjct: 733 ATDLPPDCLKLEVTESGIMEHPEQAIAKMKMLRAKGIHFSIDDFGTGYSSLSYLKRFPID 792 Query: 1025 YLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYG 1084 L +D + N D+ +I I A+ LGM T+A V D L G ++ G Sbjct: 793 TLKIDRSFVIDSTTNKDDQEIIKTIIAMARNLGMDTVAEGVEAKEQQDFLIHHGCHMMQG 852 Query: 1085 EVIADAQP 1092 P Sbjct: 853 YYFGRPMP 860 >UniRef50_B1Y6A9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y6A9_LEPCP Length = 898 Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 194/754 (25%), Positives = 321/754 (42%), Gaps = 41/754 (5%) Query: 374 YSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITL 433 Y E ++ R+G + L+ +++ + DI+ELKR EQ + R Sbjct: 156 YRAEHQFAMRDGSYRYHLVEAAMLYSAQNKEEGAVLSGTDISELKRQEQHLRASDARFNQ 215 Query: 434 ANEAGGIGIWEWELKPNIFSWDKRMFELYEI-----PPHIKPNWQVWYEC-----VLPED 483 A +G W+ +W M +++I H V+ + V P++ Sbjct: 216 AEHVARVGSWDLVPHTGAMTWSVEMARIFDITAQPHASHDAAGASVYSQADFLAAVHPDE 275 Query: 484 RQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLNKEGEVERLLGINMDMTE 542 R + P +EFRI G ++ + + +G R +G D+TE Sbjct: 276 RARVVAAQAAASAEHRPCDIEFRIVTSGGKMKWVHLRSTTFHGDDGRPLRSVGTVQDITE 335 Query: 543 VKQLNEALFQEKERLHITL-DSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALG-VPL 600 +Q + + RL ++ D+ A++ D +I +N ++G+T EEA+G P Sbjct: 336 RRQAEDEM-----RLAASVFDNSLNAILIADANGRIRKVNRAFTAITGYTAEEAVGDTPR 390 Query: 601 LTVLHITFGDNGP-LMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNI 659 L + G + P +++ + + +++ C+ G V SI + G+ Sbjct: 391 L----MKSGLHSPGFYGEMWAELQACGKWDGELMNQCKDGRIISVRESIAAVHDPAGAVA 446 Query: 660 GSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFI 719 + + D+TE + +++ A +D LT L NRA + + L +R A++F+ Sbjct: 447 YYIGIFHDITEQKASAQRIHQLAYYDVLTGLPNRALLMDRCQHELARAMRDGKRLAVLFL 506 Query: 720 DLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESA-R 778 DLDRFK +NDS GH GD LLR +A + LR SD +ARLGGDEF +LL + Sbjct: 507 DLDRFKHINDSLGHPVGDGLLRAVAQRLQGTLRDSDTIARLGGDEFIVLLEHVETSAGVE 566 Query: 779 FIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRG 838 A RI+ A D + E R+ VGAS GI+L D+ + AD+A Y +K GRG Sbjct: 567 LAARRILDAFRDPFQLEEHRL-SVGASVGISLFPDHASDITSLFKYADLALYQAKAAGRG 625 Query: 839 RVTVYEPQQAAAHSERAAMSLDEQWRM-IKENQLMMLAHGVASPRIPEARNLWLISLKLW 897 +EP+ A +R M L+ + R ++ NQL + V + +P+ R +L W Sbjct: 626 DFRFFEPRFNDAAKDR--MRLERELRQALERNQLSLQYQPVFA--LPDGRLAGAEALLRW 681 Query: 898 SCEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAK---AVASKGISISLPLSVAG 953 + + TF D L + V + +QA + A G+ I++ LS Sbjct: 682 THPALGSVSPATFIPIAEDSGLIVPIGAWVLEQACRQARQWLDAGLDPGV-IAVNLSGMQ 740 Query: 954 LSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVG 1009 + LV+ + L + LP L L I I HAES + +LR G + + G Sbjct: 741 IQRNDLVDTVSSVLARTGLPACHLELEISESYITRHAESDLQRLGQLRALGVSMAIDDFG 800 Query: 1010 RDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPL 1069 L+ L +D A+++ + + I G LG+ +A V Sbjct: 801 TGQTSLGHLRRLPVSKLKIDRSFMADIEHDAAAAAVTRAIIGLGHGLGLTVVAEGVESAA 860 Query: 1070 VMDTLSGIGVDLIYGEVIADAQPLDLLVNSSYFA 1103 L DL+ G A+PLD V ++ A Sbjct: 861 QESALVAQHCDLVQG--FRYARPLDAPVFAALCA 892 >UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=A0L9T5_MAGSM Length = 1275 Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 175/667 (26%), Positives = 295/667 (44%), Gaps = 34/667 (5%) Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIK-PNWQ 473 +LK+ EQ++Q L ++A IG W W+++ + W K + L + ++ Sbjct: 577 QQLKQLEQIHQDLENAQSVAK----IGSWHWDMQKDNLHWSKELVRLLGLEGDTSHASYS 632 Query: 474 VWYECVLPEDRQHAEK---VIRDSLQSRSPFKLEFRITV-KDG-IRHIRALANRVLNKEG 528 + E + P+DR + + +Q R F+ + RI K G + HI AL + G Sbjct: 633 TYLELIHPDDRAKINRQMAAVTRGMQDR--FEADHRIICHKSGELLHIHALGIVSRDSRG 690 Query: 529 EVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMS 588 +++G D+T K E L K + D+ GEA+V D IT +NP +++ Sbjct: 691 VPSQMVGTLQDVTRRKMAEEGLVLAK----MIFDNAGEAIVITDAQGDITDVNPAYQRIM 746 Query: 589 GWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSI 648 G+T++E +G ++L D E +++ S + ++ +SG + +I Sbjct: 747 GYTRDEIVGQNP-SILKSGRHDE-QFYEQMWNEMLSEGHWQGEIWDRRKSGEIFPKWLTI 804 Query: 649 TPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVN 708 + G V + D+T+ ++ QL A +D LT L NRA F +L ++ Sbjct: 805 DAIRDEQGVISNFVGLFMDITQQKETEEQLEKLAYYDPLTELPNRALFRDRLEQEMRLSA 864 Query: 709 STHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLL 768 + L FIDLDRFK VNDS GH GD LL ++A + LR+SD +ARLGGDEF ++ Sbjct: 865 RGGKSLGLFFIDLDRFKYVNDSLGHDKGDDLLIQVAGRIKHHLRTSDTVARLGGDEFTVI 924 Query: 769 LP--DCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQAD 826 LP + + AR IA I+ ++ + F+ +G +G S GI + D+ + AD Sbjct: 925 LPGIEQTNDVAR-IAGAIVKSLGEV-FVLQGHEVFIGGSIGIAMHPDDGEDYETLTKHAD 982 Query: 827 IACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKE-NQLMMLAHGVASPRIPE 885 A Y +K GRG + + R +SL+ R E NQL + H + + Sbjct: 983 TAMYRAKEEGRGTYKFFTSDMNEINGRR--LSLERALRQAVECNQLTL--HYQPKVDVKQ 1038 Query: 886 ARNLWLISLKLWSC-EGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKG-- 942 R + +L W+ E ++ F + L + V + A + S Sbjct: 1039 CRITGMEALVRWNHPEQGLVSPVDFIPIAEETGLIITIGEWVMQQACMDAKRLARSSRHP 1098 Query: 943 ISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRL 998 + +++ LS A LV L L+ S L P LL + I + E + +LR Sbjct: 1099 LQVAINLSAKQFQDALLVAKLERSLQQSGLAPELLEVEITESLAMGDVNRTIEQIGELRA 1158 Query: 999 AGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGM 1058 G ++ + G + LK + L +D ++ + D +++ I A LG+ Sbjct: 1159 LGVKVSIDDFGTGYSSLSYLKKLPLNALKIDKSFIQDLYLDSDDTAIVSSILSMASALGL 1218 Query: 1059 KTIAGPV 1065 +A V Sbjct: 1219 SVVAEGV 1225 >UniRef50_C6XBJ6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBJ6_METSD Length = 1150 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 196/802 (24%), Positives = 348/802 (43%), Gaps = 72/802 (8%) Query: 328 NKALCQFLGYSQEELRGLT---FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRN 384 N + LGY+ +EL T + L P+DL + +Q +E + GE + ++ E R ++N Sbjct: 371 NPRWAEMLGYTPDELEPCTADSCRALCHPDDLEQLVQALEAHLRGETDYFASESRRRHKN 430 Query: 385 GDVVWALLAVSLVRHT-DGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIW 443 G +W + R + G L +I +LK E +Q +E+ + + I + Sbjct: 431 GHWIWVADRGRVTRRSPQGEALTMSGTRLEITKLKLAETTLKQAVEQQKMFIQQAPICVA 490 Query: 444 EWELKPNIFS----WDKRM---------FELYEIPPHIKPNWQVWYECVLPEDRQHAEKV 490 ++ + W + Y++ P I W+ ++ L +R E+ Sbjct: 491 MFDRDMRYLACSNQWQEEFGHQQGSLLGLNHYDVHPDIPEKWRQAHQRALAGERLEEEE- 549 Query: 491 IRDSLQSRSPFKLEFRITVKDGIRHI--RALANRVLNKEGEVERLLGINMDMTEVKQLNE 548 + ++ +H+ R + ++ ++ ++ + +++ KQ E Sbjct: 550 ---------------DLWIRADGQHLWTRWMITPWMDDSQTIQGIIISSENISARKQAEE 594 Query: 549 ALFQEKERL-HITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGV-PLLTVLHI 606 L RL H + EA++ D I +NP +M+G++ EE +G P + + Sbjct: 595 EL-----RLAHTVFEHSSEAMLVTDADNNIITINPAFSEMTGYSLEEVIGKNPKI----L 645 Query: 607 TFGDNGP-LMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVI 665 + G G + +++ + ++ +SG Y +I + + DG V + Sbjct: 646 SSGRQGKEFYQELWNTLETSGEWRGEIWNRRKSGEEYAEWLAINNIYSEDGKLFRRVALF 705 Query: 666 QDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFK 725 D+TE ++ + A++D LT L NR F +L+ ++ H + AL+FIDLDRFK Sbjct: 706 SDITEKKRADALIWNQANYDLLTQLPNRRLFSDRLQQEIKKSQHDHSQFALLFIDLDRFK 765 Query: 726 AVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLL---LPDCNVESARFIAT 782 VND+ GH+ GD LL E + + L+ +D + RLGGDEF ++ LPD +V + IA Sbjct: 766 EVNDTLGHSHGDYLLIEASHRIQRHLKETDTVGRLGGDEFTVIIANLPDPSVMT--LIAQ 823 Query: 783 RIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTV 842 R++ A+ + + EG + + AS GIT+ ++ +AE++ AD A Y +K GR R + Sbjct: 824 RVLDALAAPYDL-EGEIVYLSASIGITVFPEDATTSAELLKNADQAMYEAKKNGRNRFSF 882 Query: 843 YEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGV---ASPRIPEARNLWLISLKLWSC 899 + P A R M D + + NQ + + +S RI +A L ++ Sbjct: 883 FTPMMQAMAQARMRMMRDLR-NALGLNQFTVYFQPIVDLSSQRIHKAEAL----IRWQHP 937 Query: 900 EGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKG--ISISLPLSVAGLSSA 957 E I F + L H + VF + Q + + G +S+ S Sbjct: 938 ELGFISPAEFIPLAEETGLIHEIGDWVFQQSAQLVKQCIPIVGDDFQVSVNKSPVQFRDR 997 Query: 958 TLVN-DLLEQLENSPLPPRLLHLIIPAEAILDHAES-----VQKLRLAGCRIVLSQVGRD 1011 T + D +E L L + + I E +L +A+S + R AG ++ + G Sbjct: 998 TQAHQDWMEYLSGLGLSGHNIVVEI-TEGLLLNADSGISDKLLHFRDAGMQVAIDDFGTG 1056 Query: 1012 LQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVM 1071 + LK DYL +D N+ G D L I A +L ++ IA V Sbjct: 1057 YSSLSYLKKFDIDYLKIDQSFVRNLSGEGEDLALCEAIATMAHKLDLRVIAEGVETTAQR 1116 Query: 1072 DTLSGIGVDLIYGEVIADAQPL 1093 D L+ IG D YG+ ++P+ Sbjct: 1117 DLLAQIGCD--YGQGYLFSRPV 1136 >UniRef50_C6XBC8 Response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBC8_METSD Length = 435 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 99/298 (33%), Positives = 168/298 (56%), Gaps = 9/298 (3%) Query: 552 QEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFG-- 609 QEK R I L+SI +AV+C DM ++ ++N AE ++GW+++EA G+P++ V + G Sbjct: 138 QEKVRAEIALNSISDAVICTDMQGEVNYLNLAAESLTGWSRQEANGLPIVKVFQLINGVT 197 Query: 610 ---DNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQ 666 D P+ + + D ++ + D +L R G + SI+P+ G G+V+V Sbjct: 198 RLHDQNPV-HRVLTQDITQ-GLNPDTILIRRDGSEVAIEDSISPIHDGSGKLTGAVIVFH 255 Query: 667 DVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKA 726 DV+ +R M ++++ A HD LT+L NR +L + + A++F+DLD FK Sbjct: 256 DVSAARAMASKMAHLAQHDYLTNLPNRMLLNDRLSQAITLAERGTSQLAVLFMDLDNFKQ 315 Query: 727 VNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARFIATRII 785 +ND+ GH GDA+L+ +A ++ ++R SD ++R GGDEF +L+ + + E A IA++I+ Sbjct: 316 INDTLGHVVGDAILQSVAKRLIELVRKSDTVSRQGGDEFLMLVDESKHGEDAALIASKIL 375 Query: 786 SAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVY 843 A+ H I +H + AS GI+L + A +++ AD A Y +K GR + Sbjct: 376 RALEKPHAIGGKELH-LTASIGISLYPHDGRDAQTLINHADSAMYEAKKQGRNNFKFF 432 >UniRef50_C6XCZ6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XCZ6_METSD Length = 869 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 225/911 (24%), Positives = 399/911 (43%), Gaps = 100/911 (10%) Query: 223 LMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSL-LATPRTYLMSHMPWLPFLL-ILLPA 280 L ++A+R+P LI+ V V +MA+D +L L P ++H L LL ILL A Sbjct: 8 LRYAAIRIP-----LIY--CVFAVLWIMASDQTLALLLPEAASITHFQTLKGLLFILLTA 60 Query: 281 NIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQE 340 ++ +++ R+ + S + + ++ + L +G+ + N + GY+++ Sbjct: 61 ALLYHLIH-----RQQLLASR--YNSLTVHANDSILLFDHQGKLVDANDRALRMYGYTRD 113 Query: 341 ELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHT 400 +++ + +QL D D + L + N E + + +G ++ L++ Sbjct: 114 QMQHIHARQLL--PDAASDWRSC-FLAEAQHNGIIFESEHKHADGSTFSVEVSACLLK-- 168 Query: 401 DGTPLYFIAQIEDINE-LKRTEQV--NQQLMERITLANEAGGIGIWEWELKPNIFSWDKR 457 G Y A + DI E L+ E++ ++QL+ ++ GG WE++++ I SW + Sbjct: 169 IGGSDYIQAIVRDITERLRVVEKLRESEQLLAHMSAIAHIGG---WEFDVETGIGSWTRE 225 Query: 458 MFELY--EIPPHIKPNWQV-WYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIR 514 + ++ E +I + + +YE E R+ E I+ ++ P+ LE + GIR Sbjct: 226 VAHIHGVEFKDNISAEFGLGFYEA---ESREKIEAAIQQAIDHGKPYDLELELVTARGIR 282 Query: 515 H-IRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERL-HITLDSIGEAVVCID 572 +R + + +G V +L G D+++ K + ++K RL + ++ EA++ +D Sbjct: 283 KWVRTVCTPHI-IDGRVLKLQGSFQDISDRK-----VAEDKMRLATLVFENSSEAIMVVD 336 Query: 573 MAMKITFMNPVAEKMSGWTQEEALG-VPLLTVLHITFGDNGPLMENIYSADTSRSAIEQD 631 +I +NP +M+G+T +E +G P + + + E ++ S + + Sbjct: 337 AESQILSVNPAFTEMTGYTAQEVVGKTPKILA---SGKQDRKFYEEMWHLLDSNGKWQGE 393 Query: 632 VVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLA 691 V ++G SY +I + G I V + D+T++++ + A+ D LT L Sbjct: 394 VWNRRKNGESYAEWLTIDTIYNEHGEVIRRVALFSDITKNKQNQEVIWRQANFDQLTGLP 453 Query: 692 NRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSML 751 NR +L + + HQ A++F+DLDRFK VND+ GH GD LL+E A +L + Sbjct: 454 NRRMLHDRLNQEILKADRNHQMLAVLFLDLDRFKEVNDTYGHLMGDQLLQESAHRLLHSV 513 Query: 752 RSSDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITL 810 R D +ARLGGDEF ++L + + + IA I+ D F + + V S GIT+ Sbjct: 514 RECDTVARLGGDEFVVILSGLQDKDVVQDIAQSILKKF-DTPFQLDNDLTHVSVSIGITI 572 Query: 811 IDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQ 870 ++ + + AD A Y +KN GR R + + A+M Q RM N Sbjct: 573 YPEDGNAGEVLFKNADQAMYVAKNNGRNRYSYFT----------ASMQAHAQNRMRLSND 622 Query: 871 LMMLAHG------------VASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPAL 918 L + G +A+ ++ +A L L+ +I F + L Sbjct: 623 LHLALPGQQFELYYQPIVELATGQVHKAEAL----LRWQHPTRGMIPPDNFIPLAEETGL 678 Query: 919 SHALDRRVFHEFFQQAAK--AVASKGISISLPLSVAGLSSAT----------LVNDLLEQ 966 + VF+E +Q + ++ IS+ S + T L+NDL Sbjct: 679 IVDIGNWVFYEAARQVKRLQSLHHASFQISINKSPVQFHNETHGHEAWISFLLMNDL--- 735 Query: 967 LENSPLPPRLLHLIIPAEAILDHAE---SVQKL--RLAGCRIVLSQVGRDLQIFNSLKAN 1021 PR ++ E +L H + S Q L R AG ++ L G + LK Sbjct: 736 -------PRQSIVVEITEGLLMHTDESISAQLLGFRDAGVQVALDDFGTGYSSLSYLKKF 788 Query: 1022 MADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDL 1081 DYL +D N+ N D L I A +L +K IA + + L IG D Sbjct: 789 DIDYLKIDRIFVRNLSRNSSDMALCEAIVMMAHKLDIKVIAEGIETEEQRELLQQIGCDF 848 Query: 1082 IYGEVIADAQP 1092 G + + P Sbjct: 849 GQGYLFSPPLP 859 >UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ79_9PROT Length = 923 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 170/683 (24%), Positives = 299/683 (43%), Gaps = 36/683 (5%) Query: 418 KRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYE 477 +R+E + + + A GIG W ++ N W + ++ + N++V+ E Sbjct: 238 RRSEHALKLSEDNLNRAQSIVGIGSWHLDIVNNCLQWSDETYHIFGVAEGTPLNYEVFLE 297 Query: 478 CVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGIN 537 V +DR + + +L R P+ +E RI V IR +R AN + G +G Sbjct: 298 HVHADDRDLVNRTWQQALL-RQPYDIEHRILVNGEIRWVREKANLDFDAHGNAVYAIGTV 356 Query: 538 MDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALG 597 D+T KQ EA + R+ DS GEA++ D +++ +N MSG+ EE +G Sbjct: 357 RDITRYKQ-EEATLRLAARV---FDSSGEAILITDENVRVVAVNHSFVAMSGYRSEEVMG 412 Query: 598 V-PLLTVLHITFGDNGPLMENIYSADTSRSAIEQ-DVVLHCRSGGSYDVHYSITPLSTLD 655 P + ++ G + D ++ Q ++ +SG Y SIT + Sbjct: 413 KNPRM----LSSGRHDAEFYRAMWDDINQHGYWQGEIWDKHKSGRIYPKWMSITAVRDEH 468 Query: 656 GSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHA 715 G + + + +D TE + + + + A +D LT L NR +L ++ + + + Sbjct: 469 GKVVNYISIARDTTEQTEAEKNIHFLAYYDVLTGLPNRTLLRDRLGQMIAVAHRDKHQFS 528 Query: 716 LVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE 775 L+F+DLDRFK +NDS GH+ GD LL+ +A + +R D +ARLGGDEF +LL + Sbjct: 529 LIFLDLDRFKYINDSMGHSVGDRLLQSVALRIQDCVREGDTVARLGGDEFIVLLREAGES 588 Query: 776 SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNG 835 +A +A +++ A+ + + +G+V AS GI++ D A ++ AD+A Y +K Sbjct: 589 AASVVAQKLLIALATPYDL-DGQVISTQASIGISIYPDQAQDADTLIKNADMAMYRAKEE 647 Query: 836 GRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAH----GVASPRIP--EARNL 889 GR + P+ S+++ R+ E + L + +AS + EA Sbjct: 648 GRNNFQFFVPEM--NFRVDLLFSMEKDLRLALERGELFLQYQPQADLASGTLSGVEALIR 705 Query: 890 WLISLKLWSCEGEII--DEQTFRRSFSDPALSHALDRRVFHEFFQQAA--KAVASKGISI 945 W +K E I E+T + A+ V Q A + ++I Sbjct: 706 WDHPVKGQVSPAEFIPVAEETGQIV--------AIGEWVLRTACSQMAEWRKTGMHDLTI 757 Query: 946 SLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGC 1001 ++ LS+ L L + L + L R L L I ++ ++ + +++ G Sbjct: 758 AVNLSIRQLRQPDLAELIKSVLLETGLDARHLELEITEGIMMGDNQAAFRFLSEMQDLGV 817 Query: 1002 RIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTI 1061 ++ + G N LK + L +D +++ + D +I I RL ++ I Sbjct: 818 QLSIDDFGTGFSSLNYLKQMPVNKLKIDQSFIRDIETDEGDAAIIRSIISLGHRLNLRVI 877 Query: 1062 AGPVVLPLVMDTLSGIGVDLIYG 1084 A V +D L G D I G Sbjct: 878 AEGVETQEQLDFLRIRGCDEIQG 900 >UniRef50_A8VQV8 Putative metal dependent phosphohydrolase n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VQV8_9BACI Length = 727 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 121/414 (29%), Positives = 219/414 (52%), Gaps = 25/414 (6%) Query: 401 DGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFE 460 DGT + F +D+ E ++ ++ N+Q +++ N I I++ + I+ DK Sbjct: 118 DGT-VRFHGHFKDVTEEEQYKRQNEQYQKKLN-DNSRLLISIFD-HMPAGIWLLDK---- 170 Query: 461 LYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRH-IRAL 519 E + W + V E+R ++ ++L+S P E I DG H ++++ Sbjct: 171 --EGNVRLSNRWFQEHYQVTGEERSVCQRGDTEALESEIPIVKEETIHFSDGKPHTVKSI 228 Query: 520 ANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITF 579 R+ N G+++ +LGI MD+++ KQ+ + LF EKE L TL S+G+ V+ D + Sbjct: 229 KLRLTNDNGDIDGVLGIGMDISDYKQVEDELFIEKETLKTTLMSMGDGVIATDEDGLVVL 288 Query: 580 MNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMEN-IYSA-DTSRS-AIEQDVVLHC 636 MNP+AE+++G+T +EA G P V +I + ++ +Y T R+ +E+D +L Sbjct: 289 MNPIAERLTGYTFKEAKGQPFDKVFYIIDEHSREKHDSLVYEILKTGRTLELEKDTLLMN 348 Query: 637 RSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASF 696 + G V S P+ +G G+V+V +D T ++ +RQ+ Y + HD LT L NR Sbjct: 349 KYGKEIPVEDSAAPIRNSEGQVKGAVVVFRDHTAEKERIRQIEYLSFHDQLTDLYNRRFL 408 Query: 697 EKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDV 756 E++L+ L N +++ +D++ K +ND+ GH+ GD LL+++A ++ R+ D+ Sbjct: 409 EEELKRLNTDRNFP---LSVLVMDVNGLKLMNDAFGHSKGDELLKKVAQIIRQQTRADDI 465 Query: 757 LARLGGDEFGLLLPDCNVESARFIATRIISAVNDYH---------FIWEGRVHR 801 +AR+GGDEF +LLP +++ + RI + ++ + F WE + R Sbjct: 466 IARVGGDEFTILLPKTSMKEVEIVVDRISTGLSRFKVGGMPVTASFGWEAKHRR 519 >UniRef50_Q21SE4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21SE4_RHOFD Length = 757 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 134/435 (30%), Positives = 215/435 (49%), Gaps = 23/435 (5%) Query: 421 EQVNQQLM-ERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPH-IKPNWQVWYEC 478 ++V Q+++ +R+ LA EA G+GIWE++LK + WD MF L+ + P + W + Sbjct: 315 QRVQQRMINQRLKLATEATGVGIWEFDLKTRRYHWDLAMFGLFGLNPQTVNALNNDWQQL 374 Query: 479 VLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANR-VLNKEGE--VERLLG 535 +LP + + R +++ F L F+I +DG +R + NR VL +G RL+G Sbjct: 375 LLPGELLRMKDATRVTIKQGQAFDLTFQIRRQDG--QVRFMRNRAVLYNDGSHAASRLIG 432 Query: 536 INMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEA 595 D+TE ++L EA R+ T E+++ D I +N ++ G+T ++ Sbjct: 433 TTEDVTE-RKLREADL----RVAATAFECQESIMVTDANQLILRVNRAFTELFGYTAQDV 487 Query: 596 LGVPLLTVLHITFGDNGP-LMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTL 654 LG T + G + P ++ T A + ++ ++G + V SIT + Sbjct: 488 LGA---TPRVLQSGRHDPAFYAAMWDGITRGGAWQGEIWDRRKNGECFPVWLSITVVCGD 544 Query: 655 DGSNIGSVLVIQDVT---ESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTH 711 DG V D+T + +RQL++ +D LT L NR + +L + Sbjct: 545 DGGVSHYVATHTDITLRKAAEDDIRQLAF---YDPLTGLPNRRLLQDRLHQAMSQARRER 601 Query: 712 QRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD 771 R AL+F+DLD+FK VND GH AGD LL+ +A + + +R SD +ARLGGDEF LLLP Sbjct: 602 GRLALLFLDLDKFKPVNDDFGHQAGDELLQAVAQRLQACVRESDTVARLGGDEFVLLLPS 661 Query: 772 CN-VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACY 830 + A +A +I A + GR + S GI + ++ +M AD A Y Sbjct: 662 IEAAQDAMAVAEKIHQAFGRPFTLSAGRNATMSFSTGIAVYPEHASDEKALMRHADEAMY 721 Query: 831 ASKNGGRGRVTVYEP 845 +K GR R ++ P Sbjct: 722 QAKAAGRDRFVLFAP 736 >UniRef50_A1K6P1 Conserved hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K6P1_AZOSB Length = 690 Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 147/426 (34%), Positives = 201/426 (47%), Gaps = 13/426 (3%) Query: 678 LSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGD 737 L++ A HD LT L NR +FE+ L + L FIDLDRFK VND+ GHAAGD Sbjct: 268 LAHQALHDPLTGLPNRRAFEQALEDAVTASRRAGDSGVLCFIDLDRFKIVNDTCGHAAGD 327 Query: 738 ALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEG 797 LLR +A L+ +R+ D++ R+GGDEF L+L C E A IA I AV + F WEG Sbjct: 328 ELLRRIARLIRQRVRAEDLICRIGGDEFALILHGCGPEDAHRIAENIREAVAAFRFTWEG 387 Query: 798 RVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYE--PQQAAAHSERA 855 R VGAS G+ ID + A++V+ AD+ACYA+K GR RV ++ P A S A Sbjct: 388 RRFSVGASIGLVRIDGSLATASDVLVAADLACYAAKKSGRNRVVEHDDGPVGGAGDSGDA 447 Query: 856 AMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWL-ISLKLWSCEGEIIDEQTFRRSFS 914 A+ Q I +QL++ V P A W I L++ GE+ Sbjct: 448 AVQA-VQPAAIPYDQLLLYTQAVV-PVGDAATESWSEILLRVVGPTGEVGSASDLLARLE 505 Query: 915 DPALSHALDRRVFHEFFQQAAKAVASKGIS-ISLPLS-VAGLSSATLVNDLLEQLENSPL 972 LD V + A+ A + +SL LS A L+S V L QL+ L Sbjct: 506 PGRHLIELDEWVAAQVCAVLARGAAGAPLQRVSLNLSRSAVLASGRYVAHLETQLKRHTL 565 Query: 973 PPRLLHLIIPAEAILDHAESVQKL----RLAGCRIVLSQVGRDLQIFNSLKANMADYLLL 1028 P L+ L PA + E + L R GCRI L ++ D LK DY+ + Sbjct: 566 DPDLVVLEFPASMVEQAPEESRHLAREARRVGCRIALERM--DGGAVALLKTLHPDYVKI 623 Query: 1029 DGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIA 1088 + G L + G A L ++++A V L+ D+L G D G +IA Sbjct: 624 SLKQLVETYGLEAGCNLAQALCGMAAALSIRSVASEVEDDLLRDSLRDFGFDFAQGALIA 683 Query: 1089 DAQPLD 1094 PL+ Sbjct: 684 ATTPLE 689 >UniRef50_Q1Q2M0 Putative uncharacterized protein n=2 Tax=Bacteria RepID=Q1Q2M0_9BACT Length = 1069 Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 143/541 (26%), Positives = 249/541 (46%), Gaps = 21/541 (3%) Query: 567 AVVCIDMAMKITFMNPVAEKMSGWTQEEALG-VPLLTVLHITFGDNGPLMENIYSADTSR 625 +++ D I ++NP +++G+T +E +G P + T + N+++ S Sbjct: 541 SILITDKEGIIEYVNPKLAELTGYTGDEIIGRTPRMLKSGKT---SNETYRNLWNTIISG 597 Query: 626 SAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHD 685 + +++ ++G Y H I+P+ G + + +D+TE +K QL A+ D Sbjct: 598 KEWQGELLNKKKTGELYWEHVHISPIRNHKGHVTNYLAIKEDITEHKKFETQLLNMATRD 657 Query: 686 ALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELAS 745 LT+L NR F+++L+ + AL+F+DLD FK VND+ GH AGD LL LA Sbjct: 658 PLTNLFNRRRFQEELQYWIAQTLRYGATGALLFLDLDNFKYVNDTLGHQAGDELLIRLAE 717 Query: 746 LMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGAS 805 ++ S LR +D+ AR GGDEF +LLP + E A IA I+ ++ F +V S Sbjct: 718 MLRSRLRDTDIFARFGGDEFAILLPYTDREKAGLIANEILELTREHTF----EHSKVTFS 773 Query: 806 AGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRM 865 GI + ++ A ++ AD+A Y +K GR R V+ Q+ H E A ++ +++ R Sbjct: 774 IGIVIFPEHGRDAETLLVNADLAMYRAKESGRNRFCVF-SQEQKTHIE-AQINWEKRIRN 831 Query: 866 IKENQLMMLAHGVASPRIP-EARNL--WLISLKLWSCEGEIIDEQTFRRSFSDPALSHAL 922 +N +L P I +N+ + L++ + E+I F L + Sbjct: 832 ALDNDRFVLH---LQPVIDLSNKNIIGYEALLRMLGEKDELIFPAEFLSIAERFGLIRDI 888 Query: 923 DRRVFHEFFQQAA-KAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLII 981 DR V + AA + + +GI + + LS + L+ + Q S P + + Sbjct: 889 DRWVVCSAIRLAAEQQFSDRGIFLDINLSGKAFADTELLGIIKHQFNTSGTKPGSIVFEM 948 Query: 982 PAEAILDHAESVQK----LRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQ 1037 A++++ + Q L+ CR L G FN L+ DYL +DG ++ Sbjct: 949 TETAMMENMIAAQDFLAALKHMDCRFSLDDFGSGFSSFNYLRHLTVDYLKIDGSFINDLP 1008 Query: 1038 GNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 N +D+ ++ I A L +T+A + L +GV+ G I + + + Sbjct: 1009 NNPVDQHMVKAIVELAHGLKKRTVAEFADSGDTLQLLRKLGVNYAQGNYIGKPRSVSEVF 1068 Query: 1098 N 1098 N Sbjct: 1069 N 1069 >UniRef50_B8KBV9 Sensor protein n=1 Tax=Vibrio parahaemolyticus 16 RepID=B8KBV9_VIBPA Length = 1594 Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 90/264 (34%), Positives = 148/264 (56%), Gaps = 9/264 (3%) Query: 299 ESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNK 358 E E +R A +A+G+ V +G++++ N +CQ GYS+E L + F +T PEDLN+ Sbjct: 692 ERELVYRAAFSQAAVGICRVALDGRFIEVNDKMCQIFGYSEEALLSMHFGDVTHPEDLNE 751 Query: 359 DLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDI---- 414 Q V+ LI G +++M+KRY N++GD WA L+VS V + + P YF+A +EDI Sbjct: 752 SQQMVDDLIEGLQRSFTMDKRYLNKSGDTFWATLSVSAVTNEEEQPKYFVAVVEDITKRK 811 Query: 415 ---NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPN 471 EL+ + L+ + LA++AGGI W + WD M+ LY + + + Sbjct: 812 NIEKELRSAKTARDGLLRGMRLASDAGGICNWALNVDTGALKWDDSMYTLYGVERNKPLH 871 Query: 472 WQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVK--DGIRHIRALANRVLNKEGE 529 ++ W + P+D +A K ++SL+S+ F EFRI + + R ++A + V +KE Sbjct: 872 YEDWERSLHPDDFSYATKAFKESLESKEVFNAEFRIINQKTNQTRWVKAAGDVVFDKESG 931 Query: 530 VERLLGINMDMTEVKQLNEALFQE 553 + + GIN+D+T+ K AL +E Sbjct: 932 DKMVFGINLDITDEKDAQAALERE 955 >UniRef50_A9L3T6 Diguanylate cyclase/phosphodiesterase n=12 Tax=Shewanella RepID=A9L3T6_SHEB9 Length = 739 Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 138/447 (30%), Positives = 215/447 (48%), Gaps = 15/447 (3%) Query: 651 LSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNST 710 S + G V++ +DV+E ++ +LS+ A++DALT L NR FE L LL + Sbjct: 268 FSQISGDKDTLVMIAEDVSEKYRLADELSFHANYDALTGLPNRLHFEALLENLLHAHDDM 327 Query: 711 HQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLP 770 + F+DLD+F+ +N+ +GH AGD LL ++A + ++R D++ARLGGDEFG+L+ Sbjct: 328 PI--CVAFLDLDQFQVINNISGHQAGDKLLCQVALRLKQLVRKGDIVARLGGDEFGILMH 385 Query: 771 DCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACY 830 CNV+SA+ IA RI + + ++ FIWEGR H V S GI +D VMSQAD AC Sbjct: 386 YCNVDSAKQIAKRICTQLANHEFIWEGRSHNVSVSMGIAKLDKKAADIYTVMSQADAACR 445 Query: 831 ASKNGGRGRVTVY---EPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEAR 887 +K+ GR +Y +P+ ++E A S+D + NQ + + P E Sbjct: 446 LAKDQGRNGWHLYSASDPKMNRLYTEMMA-SVD-IVGALALNQFELYFQSIV-PLNREES 502 Query: 888 NLWL-ISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAK--AVASKGIS 944 L L I L++ G I+ F + L+ +D V + + + Sbjct: 503 GLHLEILLRMVQANGTIVSPAIFLPAAERYNLASKVDLWVIDNLLKWGGCHLDIWQQLDL 562 Query: 945 ISLPLSVAGLSSATLVNDLLEQLENSP-LPPRLLHLIIPAEAI--LDHAES-VQKLRLAG 1000 +S+ LS L +N L +L P L +L I A+ LD A + LR Sbjct: 563 VSVNLSATSLGDFEFMNWLEMRLMAEPELVDKLCIEITETAAVSQLDQATKLLDILRPLN 622 Query: 1001 CRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKT 1060 C++ L G F LK D++ +DG+ N+ + D+ ++ I Q +G Sbjct: 623 CKLALDDFGAGFSSFAYLKRLNVDFVKVDGQFVVNICEDSADQAIVKSICQLGQDMGFDV 682 Query: 1061 IAGPVVLPLVMDTLSGIGVDLIYGEVI 1087 +A V + L +GVD G I Sbjct: 683 VAEFVESQDIGRKLQTLGVDYAQGYAI 709 >UniRef50_D0IUW1 Diguanylate cyclase/phosphodiesterase with n=3 Tax=Comamonadaceae RepID=D0IUW1_COMTE Length = 900 Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 207/819 (25%), Positives = 350/819 (42%), Gaps = 48/819 (5%) Query: 291 RAERKHISESETHFRNAMEYSAIGMALV---GTEGQWLQTNKALCQFLGYSQEELRGLTF 347 RA+++ E+ + ++ GMA V G E W N L +LG S E LRG F Sbjct: 73 RADQRG-RETAQELELVVRHAPAGMARVHVGGAEIVW--ANAKLAGWLGCSVESLRGQDF 129 Query: 348 QQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRN-GDVVWALLAVSLVRHT--DGTP 404 + L D + Q+++L+ G + + + ++ N + G V L S V + DG P Sbjct: 130 RVLVPVNDQDDVALQLQRLLDGSTDYFQVLRQCVNADTGKVTPVLCTTSRVAASGVDG-P 188 Query: 405 LYFIAQIEDINEL--KRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELY 462 + + ++D++E+ R + + M R+ L E G G+WEW+ ++ M L Sbjct: 189 VALVCVLQDLSEMVSARNAMMRSETMLRLAL--EGSGNGVWEWDALEQRLNFSTGMSALL 246 Query: 463 EIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGI-RHIRALAN 521 +++ + PED A +L+ S L R+ DG+ R RA Sbjct: 247 RYQGQDLAREFDFHQRLHPEDAAGARAQAEQALEQGSMLVLTARLLCFDGLYRWFRARGQ 306 Query: 522 RVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITL-DSIGEAVVCIDMAMKITFM 580 ++ G + R+ G+ D T ++ +E + RL T+ D+ E VV D +I + Sbjct: 307 AYKDESGRLIRISGLLSDQTASREADE-----RSRLASTVVDNTIEGVVVTDAHSRILSV 361 Query: 581 NPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGG 640 N K+ G+++ E LG T G + + A + Q + + R G Sbjct: 362 NHAFTKLLGFSEAEMLGK---TPRMFKSGRHDKAFYDAMWASMHATGHWQGEIWNRRKNG 418 Query: 641 S-YDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQ 699 + S++ + + V + D++ + +QL + A D LT L NR+ F + Sbjct: 419 EVFPERMSLSAVKDANDKVTHYVCMFTDISAEKAREQQLEFLAHRDTLTGLPNRSQFTRM 478 Query: 700 LRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLAR 759 L ++ ST++R A++ ++DRFK VNDS GH+ GD +LR ++ M LR D++ R Sbjct: 479 LGEAVELSQSTNRRMAVLLFNIDRFKDVNDSYGHSIGDEVLRHVSVQMQGALRHGDIIGR 538 Query: 760 LGGDEFGLLLPD-CNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQA 818 L GDE ++ C +SA +A R+++A +G V SAGI L D+ A Sbjct: 539 LAGDEICVVAQSICGRDSAVDVAERLMAAAGQPWTTPDGLSVVVSVSAGICLYPDHALTA 598 Query: 819 AEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHG- 877 +++ A A Y +K G + A ER ++L+ + R E M L + Sbjct: 599 DDLLQGAHAAVYGAKARGSNAWCFFHENMTQAARER--LALEARLRRALELGHMRLYYQP 656 Query: 878 ---VASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQA 934 +A+ R+ A L L+ E +I F + + L V E +Q Sbjct: 657 QIELATGRLVGAEAL----LRWLDPEEGLISPARFIPVAENSGVIGPLGLWVLGEACRQG 712 Query: 935 A--KAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES 992 +A ++I++ +S+ + E L S P LL L I A+ + E Sbjct: 713 QQWRAAGLPDLAIAVNVSLHQFLLTDIAGATAEALNKSGFPASLLELEITESALAEKPEE 772 Query: 993 ----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLIT- 1047 + +LR G R+ + G LK D L +D ++ + D+M I+ Sbjct: 773 ALAVLNRLRELGLRLAIDDFGTGYSSLAHLKRFPLDLLKIDQGFIRDIP-HSADDMTISS 831 Query: 1048 --IIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYG 1084 I GHA +G+K +A V + L G D G Sbjct: 832 SVIALGHA--MGLKVLAEGVETQEQLSFLQQKGCDYFQG 868 >UniRef50_A3QBK2 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella loihica PV-4 RepID=A3QBK2_SHELP Length = 816 Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 158/595 (26%), Positives = 275/595 (46%), Gaps = 47/595 (7%) Query: 495 LQSRSPFKLEFRITVKDGIRHIR-ALANRVLNK-EGEVERLLGINMDMTEVKQLNEALFQ 552 + S P K +F + ++D I A A+ + K +G V +L D+T +K+ L Sbjct: 202 IASNKP-KHQFEVALEDTPGKIDYAQAHLTIRKQDGHVAGMLLTLTDITSIKRAKSQLDT 260 Query: 553 EKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDN- 611 E RL I L++IG+AV+ D ITFMNP+AE+++GW +A+G+ + V+ + Sbjct: 261 ENRRLKIMLNAIGDAVIATDSEAMITFMNPIAERLTGWVCRDAIGLHIEQVMDLCDAKTK 320 Query: 612 --GPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVT 669 P I + A+ + L+ G ++ + S P++ +G G ++V D + Sbjct: 321 YRSPNPVTIAIKEKRNVAMALNCQLNSLDGTTFQIEDSAAPITDSEGKVTGGIIVFHDCS 380 Query: 670 ESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVND 729 ES M ++S+ A+HD LT L NR ++ +S + AL+ ID+D FK +ND Sbjct: 381 ESVAMSLKMSHLANHDQLTDLPNRILLHDRINHACAVADSYDKSVALMLIDIDHFKYLND 440 Query: 730 SAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVES-ARFIATRIISAV 788 S GH+ GD +++++A + S++ + L R+GGDEF LLLP S IAT I+ ++ Sbjct: 441 SLGHSYGDQVIKQVAKRLQSLIDPNATLGRIGGDEFVLLLPSLTATSQVDSIATDIVRSL 500 Query: 789 NDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQA 848 N F +G+ + + S GI++ + +A E+M+ D A Y +K+ GR R + Sbjct: 501 N-TPFRIDGQEYTLSVSVGISIYPSDALRAEELMTHVDAAMYRAKDLGRNRFCYF----- 554 Query: 849 AAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLK------------L 896 S D + + K ++L+ L E + LK L Sbjct: 555 ---------SEDLEQELTKRHELVTLLRTAIDTEAIEVYYQPKVDLKTKEIIGAEALARL 605 Query: 897 WSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAG--L 954 + G++I F + L H L + + AAKA +G + + +++A Sbjct: 606 YDPSGKLISPLDFIPLAEETGLIHQLGEIILKQSC-MAAKAWQKRGRPLQIAVNIAAKQF 664 Query: 955 SSATLVNDLLEQLENSPLPPRLLHLIIPAEAIL---DHAESV-QKLRLAGCRIVLSQVGR 1010 ++ + + + LE + L L L + +++ D A +V L G I + G Sbjct: 665 TNPEFCDSVAKVLELTGLDSSFLELEVTESSLMYDFDEALNVLNTLSSLGLSIAIDDFGT 724 Query: 1011 DLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQG--H-AQRLGMKTIA 1062 + LK + L +D ++ G DE + I++ H A+ L +K IA Sbjct: 725 GYSSLSYLKFFPVNTLKIDQSFVKDMLG---DEQSLDIVKAVIHLAKSLKLKLIA 776 >UniRef50_UPI0001C31379 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31379 Length = 587 Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 158/546 (28%), Positives = 247/546 (45%), Gaps = 29/546 (5%) Query: 564 IGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSA-- 621 IG AV +D ++ NP ++ G+T EE G L ++H ++ P + +A Sbjct: 43 IGNAV--LDDGDRVVVANPALARIVGFTPEELRGRTLAELVHP---EDLPRLSGAIAALR 97 Query: 622 DTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYS 681 R +E ++ +G L DG ++ + D+TE +++ L + Sbjct: 98 AGERRGLETEIRCLHATGQPVPAAVHAAALRDTDGGRSRVLVQVLDITERKRVEAHLQHM 157 Query: 682 ASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLR 741 A HD LT L NR FE++L + V A++ +D+DRFK VND+ GH AGD ++ Sbjct: 158 ADHDPLTGLLNRRRFEQELERHVAHVRRYGPEGAVLVVDVDRFKQVNDAYGHTAGDRVIA 217 Query: 742 ELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHR 801 +A ++ LRS+D +AR+GGDEF +LLP + A +A R++ AV +G Sbjct: 218 SVARVLHRRLRSTDTVARIGGDEFAVLLPKADRAEAEIVARRLVEAVRAQADPGDGERTH 277 Query: 802 VGASAGITLIDDNNHQAAE-VMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLD 860 V S G T++D+ + +AE + AD+A Y +K+ G +E A RA + Sbjct: 278 VTISVGATVLDERSELSAEAAVVDADLAMYDAKDSGGDGFAFFEADVHARSRSRARTT-- 335 Query: 861 EQWRMIKENQLMMLAHG----VASPRIPEARNLWL---ISLKLWSCEGEIIDEQTFRRSF 913 WR + + LAH VA P + + + + L+L G++I F Sbjct: 336 --WR---DRIVDALAHDRFALVAQPVVDATSGVVVQHELLLRLTGSHGDLIPPAAFLSIA 390 Query: 914 SDPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAG--LSSATLVNDLLEQLENSP 971 L A+D V A+ + G + L ++V+G L+ L+ + +L + Sbjct: 391 ERDGLIVAIDSWVARRAIGLLAE-LERSGTATPLEVNVSGRSLADTDLLAAIAGELRRTG 449 Query: 972 LPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLL 1027 + PR L IP A + + Q++R GCR + G L LK D L Sbjct: 450 VDPRNLVFEIPETAAVADIQLARAFAQQVRALGCRFAIDDFGAGLGSLYYLKHLPFDMLK 509 Query: 1028 LDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVI 1087 LDGEL + D ++I A LG IA V L+G+GVDLI G I Sbjct: 510 LDGELVEQCSRTVADRLVIESAVNVAHGLGAVAIAEQVGDAETHALLTGLGVDLIQGHHI 569 Query: 1088 ADAQPL 1093 A QPL Sbjct: 570 AMPQPL 575 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/130 (30%), Positives = 65/130 (50%) Query: 300 SETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKD 359 +E++ R + + IG A++ + + N AL + +G++ EELRG T +L PEDL + Sbjct: 30 AESNLRTIFDTAPIGNAVLDDGDRVVVANPALARIVGFTPEELRGRTLAELVHPEDLPRL 89 Query: 360 LQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKR 419 + L +GE E R + G V A + + +R TDG + Q+ DI E KR Sbjct: 90 SGAIAALRAGERRGLETEIRCLHATGQPVPAAVHAAALRDTDGGRSRVLVQVLDITERKR 149 Query: 420 TEQVNQQLME 429 E Q + + Sbjct: 150 VEAHLQHMAD 159 >UniRef50_D2M1V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2M1V4_BACS4 Length = 840 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 190/767 (24%), Positives = 348/767 (45%), Gaps = 57/767 (7%) Query: 328 NKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNG-- 385 N A GY EE+ F ++K ISGE N ++ N+ G Sbjct: 58 NDAFYILTGYLIEEIHD-NFHTFIRKSQQAYTTDCMKKAISGEANQLNI--FIVNKQGKE 114 Query: 386 -DVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMER-ITLANEAGGIGIW 443 +V+ +L+ +++ +G +Y + I DI++L+ E+ N +ER + A IG W Sbjct: 115 IEVLLSLIPITVNERIEG--IYGV--IRDISQLRIYEK-NLSFIERSLNNAQYIANIGSW 169 Query: 444 EWELKPNIFSWDKRMFELY--EIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPF 501 +++ + W K+MF ++ + + P+ + + + V +DR I+D+++ + F Sbjct: 170 DYDPHNDKLYWSKQMFRIFGLDEKTNTAPSMEQYLKYVHHDDRLRDIVAIQDAMEKKKSF 229 Query: 502 KLEFRITVKDGIRHI-RALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHIT 560 E RI KDG++ I + N +++ EG V +++G D+TE K+ N+ L +++ I Sbjct: 230 NYESRIFRKDGMKRIVKIQGNPIIDNEGNVVKIIGNTHDITEQKEANQRLVDNEKQARII 289 Query: 561 LDSIGEAVVCIDMA-MKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIY 619 +++ E + ID++ K+ F + E++ G+ ++ + L I D + E + Sbjct: 290 FNNLDEIIWSIDISSRKVIFCSNGFEQLFGYCLDDLIDERQLWQKVIHEEDIKGIPEKLI 349 Query: 620 SADTSRSAIEQDVVLHCR-SGGSYDVHY-SITPLSTLD--GSNIGSVLVIQDVTESRKML 675 + + CR S +V + I L +D G I +I+D+TE +K+ Sbjct: 350 TLSQGNQ-----LKFECRVQHTSAEVRWIEIKALPIIDDLGDFIRVDGIIRDITEKKKLD 404 Query: 676 RQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAA 735 ++ + A HD LT+L NR SF+ +L L+ T ++ ++D+DRFK VND GH Sbjct: 405 AKMHHIAHHDHLTNLPNRRSFDIKLHELIHHAKKTKSIFSVFYLDIDRFKHVNDMLGHNY 464 Query: 736 GDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIW 795 GD LL+E++ + +L+S +AR GDEF +LL D E A I++ + I Sbjct: 465 GDDLLKEISYRLKQVLQSH-FIARTSGDEFAVLLHDVTEEEVIVFAHNIVNVMRQAFHIS 523 Query: 796 EGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQ-QAAAHSER 854 E + V AS GI + A ++ AD A +K G+ Y P+ +H+ Sbjct: 524 EVESY-VTASIGIAFYPKDGENAVTLLKNADTALSFAKIDGKDNYKHYIPEMNEDSHN-- 580 Query: 855 AAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFS 914 L++ R+ E + L + P+I + + K+ CE +I +R Sbjct: 581 -IYFLEKDMRLALEKEEFYLEY---QPKID------VKTKKVIGCEA-LIRWTHPKRGIV 629 Query: 915 DPA--LSHALDRRVFHEFFQQAAKAVASK-------GIS---ISLPLSVAGLSSATLVND 962 PA + A + + + K V + GI+ +S+ +S L +L++ Sbjct: 630 SPAQFIPIAEESDLICDIGNWVIKKVCKQLKKWHLEGINTVPVSINISAQHLLKTSLLDT 689 Query: 963 LLEQLENSPLPPRLLHLIIPAEAILDHAESV----QKLRLAGCRIVLSQVGRDLQIFNSL 1018 + L+ + + P LL L I +++ +SV + L+ G ++ L G + Sbjct: 690 IFTALKANHVSPSLLELEITETSLIQPNQSVFSTIRSLKKLGVKLSLDDFGVGYSSLTHI 749 Query: 1019 KANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPV 1065 + D L +D + V D ++I+ I A LG+ +A V Sbjct: 750 RKFPLDTLKIDKSFISKVPTEKDDAVIISSIIEMAHGLGLTILAEGV 796 >UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FU0_DECAR Length = 1006 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 178/703 (25%), Positives = 309/703 (43%), Gaps = 49/703 (6%) Query: 418 KRTEQVNQQLM---ERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP-HIKPNWQ 473 +R + V+QQL+ ER+T A +G WE L + ++ ++E +Q Sbjct: 316 RREQLVSQQLLLKEERLTAAQRIAQLGSWEIHLPSMHVTCSDELYRIFEFTKRETGYQYQ 375 Query: 474 VWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLNKEGEVER 532 + + PEDR +K + +S+ SR P L+ R+ + DG ++++ ++G R Sbjct: 376 DFLAKIHPEDRSVVDKTLHESIASRQPASLKHRLLMPDGRVKYVLESCETEYGRDGTPLR 435 Query: 533 LLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQ 592 ++G + ++T +++ + + L + GEA++ D+ KI +NP +++G+T Sbjct: 436 VIGTSQEVTAQQEM----LAQMQLLASAVQYSGEAILITDVKNKILTVNPAFTRLTGYTS 491 Query: 593 EEALGVPLLTVLHITFGDNGPLM----ENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSI 648 EEA+G +F G M E +++ R + ++ + GG Y SI Sbjct: 492 EEAVG------RDPSFLSAGRTMPEEYERMWNGIAERGFWQGEIWDRRKDGGIYPKWMSI 545 Query: 649 TPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVN 708 + + DG V DV+ R +L + A HD LT L NR S + +L L Sbjct: 546 SVIRGEDGMIRYHVAHFTDVSSERAAEERLHHMAHHDVLTGLLNRLSLKGRLDQALAAAR 605 Query: 709 STHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLL 768 R A++F+DLDRFK +ND+ GH GD LL E+A+ + +R SDV+AR+GGDEF ++ Sbjct: 606 RDGSRVAVLFVDLDRFKVINDTLGHHVGDELLIEVANRLRDGVRDSDVVARVGGDEFVIM 665 Query: 769 LPDCNVESA-RFIATRIISAVNDYHFIWEGRVHRVGA-------SAGITLIDDNNHQAAE 820 L SA +A +++ +V G+ +++G S GI + + Sbjct: 666 LSGVEHTSAVAMVAEKLVFSV--------GQSYQIGGYDLYSTPSIGIAIYPTDGEDGDI 717 Query: 821 VMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVAS 880 +M AD A Y +K GR ++ + A ER ++ + R NQ L + Sbjct: 718 LMKNADAAMYHAKMAGRNNFQFFDAKMNEAALER--LNTEHALRRALANQEFCLYY---Q 772 Query: 881 PRIPEARN--LWLISLKLWSC-EGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA 937 P I A N L +L W+ E ++ F + L L V +Q A Sbjct: 773 PVIDLASNRVASLEALIRWNHPEKGLLLPGKFIGIAEETGLIQPLGEWVLWAACRQLADF 832 Query: 938 VAS--KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPR-LLHLIIPAEAILDHAESVQ 994 A+ GI + + +S + + L +E + PR L+ I + A+ E+V+ Sbjct: 833 AAAGISGIKMGVNISAIQMRNGNLPLLARGVIEAYDIDPRNLIFEITESVAMEQPTETVR 892 Query: 995 KLRL---AGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQG 1051 L L G + + G + L+ ++L LD + + ++ G Sbjct: 893 ILDLLNAMGVSVAIDDFGTGYSSLSYLRMFPINHLKLDRSFVEQIGEEIDGCVICDATIG 952 Query: 1052 HAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLD 1094 A L +K +A V +D L G D++ G + + P D Sbjct: 953 LAHSLELKVVAEGVETQAQLDYLRSRGCDMVQGFLFSRPVPAD 995 >UniRef50_B9ZRI3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZRI3_9GAMM Length = 667 Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 101/287 (35%), Positives = 154/287 (53%), Gaps = 1/287 (0%) Query: 557 LHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHI-TFGDNGPLM 615 L + +I AV+ +D I +MNP AE+M+G + +ALG L VL + G + PL Sbjct: 369 LRRAMCAIPNAVITLDARGGIVYMNPAAEQMAGLVRLQALGCTLEQVLDLREMGTDRPLG 428 Query: 616 ENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKML 675 + + L SG V T L + GS++ ++LV+ D++E R+++ Sbjct: 429 AERSEPLAANLGEHTEARLVTPSGQERIVRIDRTALDPVAGSSVRTLLVLADISEERELV 488 Query: 676 RQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAA 735 +L + ASHD LT L NR +FE++++ + +LV +DLD FKAVND GH Sbjct: 489 DRLVHEASHDPLTGLLNRRAFEREMQRAMDNAREYSSVASLVLVDLDYFKAVNDRHGHQV 548 Query: 736 GDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIW 795 GD LLR + +++ + RS D +AR+GGDEF ++ D + E AR + RI SA+ D Sbjct: 549 GDELLRRVGTILRQLTRSRDAVARIGGDEFAVVAFDTDAEQARILGQRICSALGDRPLQV 608 Query: 796 EGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTV 842 E R +GAS G+ + AD ACY++K+ GRG+V V Sbjct: 609 EARDVTIGASVGVVQLGAGLAGVDAAFVAADRACYSAKSEGRGQVGV 655 >UniRef50_Q1N3N5 Sensory box protein n=1 Tax=Bermanella marisrubri RepID=Q1N3N5_9GAMM Length = 764 Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 150/569 (26%), Positives = 260/569 (45%), Gaps = 35/569 (6%) Query: 308 MEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGL-TFQQLTWPE---------DLN 357 ME S A+ G + N A GY+ +E+R + T+ + +P+ D Sbjct: 12 MEQSPQPCAVRGEGDDIVYINPAFTLVFGYTLDEVRNINTWYRCAYPDESYRRSVLQDWE 71 Query: 358 KDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINEL 417 + L+Q+E+ S ++ +E +NG+ + + + DG + D+ Sbjct: 72 QQLRQLEQTNSHPVH---LEVTIQCKNGEK--KRVELYPFKLNDGQHCQYGINFIDVTRA 126 Query: 418 KRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFE-LYEIPPHIKPNWQVWY 476 ++ E ++ ER LA ++ G IW+W++K F + + E L ++ N +Y Sbjct: 127 RKAEDAVKKSEERHRLAMKSSGTRIWDWDVKQQKFYFSPDLVEELGYDGQRLEYNVDDFY 186 Query: 477 ECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHI-RALANRVLNKEGEVERLLG 535 V P+D + EK IR + +P+ L +R+ KDG + + + N++ V+R +G Sbjct: 187 NIVHPDDLKAIEKAIRQHFKYNTPYHLNYRLRHKDGHYFLYENIGQAIRNQDNLVQRFIG 246 Query: 536 INMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEA 595 + +++ K LNE + + + D+ GE ++ D I +N +SG+ Q E Sbjct: 247 SSKNLSTQKALNE----QAQFGRLVFDNSGEGILIADAHRVIKAVNSAYCYISGYEQHEV 302 Query: 596 LGVPLLTVLHITFGDNGPLME---NIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLS 652 +G+ +L PL E +I+ + + + G + + I Sbjct: 303 IGLESDFLLK-----ENPLDEKQRDIFKSIQRNGYWRGETWYKHKEGHAIAIEMMINTQK 357 Query: 653 TLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQ 712 + +++ D+T+ ++ + A +D LT L NR SF + + L+Q Sbjct: 358 NSNNEIENYIVLFSDITDKKQTQELIWQQAHYDNLTQLLNRHSFTQYTQNLIQKALP--- 414 Query: 713 RHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFG-LLLPD 771 AL+FIDLD FK VND+ GH GDALL E A + +R SD++AR GGDEF LLL Sbjct: 415 -FALLFIDLDNFKQVNDTQGHNVGDALLIEAAKRIKQCVRESDIVARFGGDEFTVLLLGI 473 Query: 772 CNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYA 831 NV S + I + I +++ F + V AS GI ++ ++ AD A Y Sbjct: 474 KNVLSTKRICSDITKRLSE-PFTLDKEKAYVSASIGIAQFPWDSDNLEDLYKYADQAMYE 532 Query: 832 SKNGGRGRVTVYEPQQAAAHSERAAMSLD 860 +K+ GR R + + + SER +SLD Sbjct: 533 AKHLGRNRFSFFTHELQQKASERQRISLD 561 >UniRef50_C5T4L2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4L2_ACIDE Length = 946 Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 166/603 (27%), Positives = 266/603 (44%), Gaps = 68/603 (11%) Query: 527 EGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEK 586 +G V +G +D+TE +Q EAL EKER +TL SI + V+ D +I +N A+ Sbjct: 343 DGAVAGTIGALVDITERRQAEEALRAEKERAEVTLASIADGVITTDQGGRIETINEAAQF 402 Query: 587 MSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIE--------QDVVLHCRS 638 M+G+T ++ALG L V + PL + +++ +R + V++H RS Sbjct: 403 MTGYTAQQALGRALPEVFKLY---EKPL--GLATSEEARPGADPLLTPKATHQVLIH-RS 456 Query: 639 GGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEK 698 G Y + Y+ P+ DG+ G VLV +DVTE+R + +QLS+ A HDALT L NR + Sbjct: 457 GERYAIEYTAAPIRQADGTVAGRVLVFRDVTETRNLRQQLSWHARHDALTGLYNRTALAV 516 Query: 699 QLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLA 758 +L + T S A+ IDLD F+A+N+ G GD LL+E+A + + R +D +A Sbjct: 517 RLTHAIFTARSQGNVLAVCLIDLDHFQAINEQHGILVGDRLLKEVALRLTAFARPTDAVA 576 Query: 759 RLGGDEFGLLLPDCNVESARFIATRIIS---------AVNDYHFIWEGRVHRVGASAGIT 809 R+GGDEF LLL + AR I R+ A++D + AS G+ Sbjct: 577 RMGGDEFALLL--GELPHARAIEERLTLLLAQLAQPYAIDDLAL-------QCTASVGVA 627 Query: 810 LIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKE- 868 + +N ++ AD A +K GR ++ ++ +R +L Q I + Sbjct: 628 VFPPDNAGPDTLLRHADQAMCQAKAAGRNQMHFFD-----VRLDREVQTLHSQQTRIAQA 682 Query: 869 ---NQLMMLAHGVASPRIPEARNLWLISLKLWSCEGE----------IIDEQTFRRSFSD 915 +L + + R E + + +L W +ID+ + + Sbjct: 683 LHAGELRLHYQPKVNLRTGEI--VGMEALMRWQHPERGLLGPHEIFPLIDDTDLIVAVGE 740 Query: 916 PALSHALDR-RVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSP-LP 973 AL AL + RV+ A G S+S+ ++ V+ L + L P +P Sbjct: 741 WALQEALAQMRVWTR---------AGMGWSVSVNIAARQFHGGNFVDRLKDILHGCPEVP 791 Query: 974 PRLLHLIIPAEAILDHAESVQ----KLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLD 1029 P L L I A L+ + ++ K + G R L G + LK A+ + +D Sbjct: 792 PARLELEILESAALEDIQYMRQMMHKCQALGVRFALDDFGTGFSSLSYLKRLPAETIKID 851 Query: 1030 GELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIAD 1089 + + D L+ I A + IA + L +G +L G IA Sbjct: 852 QSFVKGILHDPDDLTLVGAIVALASAFHRQVIAEGAESRAHCEKLLQLGCELAQGHGIAP 911 Query: 1090 AQP 1092 A P Sbjct: 912 AMP 914 >UniRef50_D0I8U2 Putative uncharacterized protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I8U2_VIBHO Length = 1247 Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 166/757 (21%), Positives = 329/757 (43%), Gaps = 19/757 (2%) Query: 353 PEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRH-TDGTPLYFIAQI 411 P+DL ++ Q G+ T +E R + + W + + G I I Sbjct: 484 PDDL-REYQHTMAHCGGKFGT--IEYRLMDESEKYRWVRDHCRPIEQDSHGVTTKVIGTI 540 Query: 412 EDINELKRTEQVNQQLMER-ITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKP 470 DI++ +R + + L + + L + G +GIWE+E W++ M+ LY I + Sbjct: 541 TDIDD-ERERSLQKALSSKQVELIEQVGELGIWEYEPHTATLYWNREMYALYGISEEEEI 599 Query: 471 NWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEV 530 + W E +L DR + + L ++ + +++ R+++ E Sbjct: 600 TLETWRERLLDADRHPFDTLFNLGRIHNEHLTLNIQVKHTSDLIVNHSISARIIHAESGT 659 Query: 531 ERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGW 590 RL G + T +++ N L +E + L ++S+ + ++ +D ++ITF+N A +++G+ Sbjct: 660 -RLAGFCQETTRLQKENVVLTRENQLLSAAIESVNDGIIVLDSLLRITFINQHAAELTGY 718 Query: 591 TQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITP 650 + +G + ++ + ++ S + L V+ TP Sbjct: 719 PASDLIGSTIDEQFNVFDHHSQYAFAHLLSDYHQDFCLSGTFTLQTEQFQETLVYLEATP 778 Query: 651 LSTLDGSNIGSVLV--IQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVN 708 ++ + + G VL IQD SR + YS D +T + +FE+ L+ ++ Sbjct: 779 VAPHNNATNGWVLTFRIQDALPSRAANSEGRYSV--DPITKFPGKRAFEQILQNHTDNLH 836 Query: 709 STHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLL 768 H LV I+L + + D+ G D L++ A L+ S S +ARL FGLL Sbjct: 837 YETVSHVLVMIELKGLETLADAFGDPVKDQLIKSAAILIKSYATKS--VARLSESRFGLL 894 Query: 769 LPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIA 828 L + + SA+ I + + + + + + G+TLI+ N +++ QA +A Sbjct: 895 LDNQGLGSAQEIMSSLSEKICALKYQPGETAYHLECVMGMTLIEGNQKTPFQIIYQAQVA 954 Query: 829 CYASKNGGRGRVTVYEPQQ-AAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEAR 887 + + ++V++P S R L I +L + S R + Sbjct: 955 MESVSDDCHPAISVFDPSSLTDGISFRRDFLLQRIDIAITNRSFSLLCMPIMSNR-NGLQ 1013 Query: 888 NLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISL 947 N + ++L + EG+++ F + +++R VF+E + A+ +A+ G++I++ Sbjct: 1014 NWHEVLVRLITEEGQLLLPAEFLPAAEPTGRLISIERWVFNEVLNEQAQTLAAAGLNIAI 1073 Query: 948 PLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAIL----DHAESVQKLRLAGCRI 1003 +S + + + ++ L ++ S LP R L + I +L + V LR GC + Sbjct: 1074 NISASAFYNESFIDYCLALIKKSNLPSRRLCIEIKESTLLIDTLRAKDVVSSLRKLGCEV 1133 Query: 1004 VLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAG 1063 + G +L F+ L+ + +DG L A ++ +L+D ++ I+ L +KT A Sbjct: 1134 AVDNFGTELTSFSYLRKFNVSIIKIDGSLIAMMKASLVDRRIVESIKQICDSLRIKTAAQ 1193 Query: 1064 PVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNSS 1100 V + + G+D I G V D PL +++S+ Sbjct: 1194 KVNSDEDLRLVQAAGLDYIQGYVFGDPLPLARVISSA 1230 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 92/369 (24%), Positives = 172/369 (46%), Gaps = 27/369 (7%) Query: 97 NIVEAVVGAVLLRKLLPWYNPLQNLADWLRLALGSAIVPPLLGGVL------VVLLTPGD 150 NI + G++ L + P +L + + + ++ P +G + + L P + Sbjct: 101 NIATIIAGSLSLAYISRIDEPFLSLKAFGWFVVATVLISPAIGALFGGWTLHLTLSVPLE 160 Query: 151 DPLRAFLIWVLSESIGALALVPLGLLFKPHYLLRHRN--PRLLFE---SLLTLAITLTLS 205 + A W L + IG LA+ PL + LL+ + P ++ +L +AI+ S Sbjct: 161 TVVSA---WYLGDVIGILAITPL-----IYTLLQRKQGLPSTFYKPTTALTIIAISALSS 212 Query: 206 WLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLI-FLTTVMMVSLMMAADPSLLATPRTYL 264 WL + ++ +PF I + L ++ L R+ AF F+ +V + L+++ D + + T L Sbjct: 213 WL-LSHVEYPFIAIAIALTVASAVLDRLSAFFTAFIVSVTLDLLLVSPDNLMSSAGTTEL 271 Query: 265 MSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQW 324 + +P +L ++ + +K E T F NAM+ S IG +V ++G+ Sbjct: 272 L-----MPISGAMLLGGLLAVKSARLLQIQKISDERATLFSNAMQSSVIGTVMVQSDGKM 326 Query: 325 LQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRN 384 N + + +GY+ EEL TF+QL + D + +Q+ L +I+++ E R +N Sbjct: 327 SNPNNSFVELIGYTHEELDRKTFRQLVFHRDRDATNEQLYLLTENKIDSFKTEIRLTRKN 386 Query: 385 GDVVWALLAVSLVRHT-DGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIW 443 V+W + VS+VR G L+FI Q++DI++ +R E ++ A ++ Sbjct: 387 KQVIWTRIGVSVVRDKWHGNVLHFIYQVQDIDKDQRFEHERNMWSQKFEFALGINRTAVY 446 Query: 444 EWELKPNIF 452 E E F Sbjct: 447 EMECHTKFF 455 >UniRef50_UPI000169A144 PAS sensor diguanylate cyclase and phophodiesterase n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI000169A144 Length = 479 Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 96/291 (32%), Positives = 162/291 (55%), Gaps = 4/291 (1%) Query: 561 LDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITF--GDNGPLMENI 618 +++ E + +D + NP AE M G +E+ +GV + + G+ L + Sbjct: 1 MEAATEGIAMLDDDGLVQLFNPAAEMMFGRLEEDLIGVGFEQLFEASAPPGEQHALAWYL 60 Query: 619 YSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQL 678 + S ++++ + +G + + S++P LD +L++QD++ESR+ ++L Sbjct: 61 SNWGFSEDGGIRELIGYRSNGDEFPLRLSLSPFE-LD-QRPHYLLLMQDLSESREAEQRL 118 Query: 679 SYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDA 738 +Y A HD LT L NRA E++L +LL T S H + F+D+D+FK VND+ GH AGD Sbjct: 119 AYLAQHDVLTGLLNRAELERRLAVLLSTPASPRPHHVVCFMDIDQFKLVNDTGGHDAGDE 178 Query: 739 LLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGR 798 LLR+LA L+ S L+ D+L R+GGDEFG++L DC+VE A I++ ++ + + F W+ R Sbjct: 179 LLRQLAILIKSQLKGFDLLGRVGGDEFGVILTDCSVERAESISSNLLQTIRSFFFSWQER 238 Query: 799 VHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAA 849 + V S G+ + + ++S A++AC +K GR R+ Y A Sbjct: 239 SYDVAVSIGLFGFKPGDESTSSILSSANVACQMAKEQGRNRLHTYHTGDTA 289 >UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2A0_9PROT Length = 644 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 147/562 (26%), Positives = 256/562 (45%), Gaps = 20/562 (3%) Query: 544 KQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTV 603 +Q+ E+L K+++ +D+ +A + ID I+ NP+AE + GW ++ A+G ++ + Sbjct: 74 QQIMESLQASKQKIRQIIDTANDAFITIDAEGSISDWNPMAEMIFGWPEDLAIGKSMMDL 133 Query: 604 LHITFGDNGPLMENIYSADTSRSA--IEQDVVLHC--RSGGSYDVHYSITPLSTLDGSNI 659 + + L+++I + SA + +V+ R G + SI+P + G++ Sbjct: 134 I-MNQAPRNALIDDIQEFINTGSAPFTQGQIVITALHRDGHEFPAEMSISPQAV--GASF 190 Query: 660 GSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFI 719 + ++D+++ + +L A+ D LT L NR S+ L+ + + A++F+ Sbjct: 191 IFNIFVRDISQRKADEEKLETLATRDELTGLINRFSYNHLLKKEVALAKRHMESLAVLFL 250 Query: 720 DLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESAR 778 DLD FK +NDS GH GD LLRE A+ + + +R SD +AR+GGDEF +++P +V R Sbjct: 251 DLDGFKNINDSLGHDVGDQLLRETANRLSACIRESDTVARIGGDEFLIIMPGIKDVHDPR 310 Query: 779 FIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRG 838 F+ RI++ + + I VGAS GI+L + ++ AD A Y +K+ GR Sbjct: 311 FLCERILNMIGQPYLIGTQECF-VGASIGISLYPLDGDNVESLVKNADTAMYQAKDSGRN 369 Query: 839 RVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWS 898 + P +R M ++ I++NQ +L + R L + +L W+ Sbjct: 370 AYKFFTPAMGEEAFKRMEMERALRY-AIEKNQFKLLYQ--PQVELSSGRILGVEALLRWT 426 Query: 899 -CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQ-AAKAVASKGISISLPLSVAG--L 954 E I F + L + V E +Q A G + + ++ A Sbjct: 427 HPEWGPISPSVFISLIENTNLILPIGEWVLDEACKQNKAWQALHPGFPLRMAVNFAARQF 486 Query: 955 SSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLSQVGR 1010 + A LV + + L+ S L L L I + ++ E +Q L+ G I + G Sbjct: 487 AQADLVETVAKALQKSGLAAEFLELEITEGSAMNDIELNIRKMQALKELGVSIAIDDFGT 546 Query: 1011 DLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLV 1070 LK D L +D +Q D ++ I A LGM+ IA V Sbjct: 547 GFSSLAYLKRFPIDILKIDKSFLDEIQHGKKDAAIVATISEMAHSLGMEVIAEGVETKYQ 606 Query: 1071 MDTLSGIGVDLIYGEVIADAQP 1092 ++ L G G D+I G + + P Sbjct: 607 LEFLRGHGCDMIQGYLFSRPVP 628 >UniRef50_B8HUG4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HUG4_CYAP4 Length = 583 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 141/550 (25%), Positives = 251/550 (45%), Gaps = 40/550 (7%) Query: 566 EAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHI-TFGDNGPLMENIYSADTS 624 + +V + K+ +++P + G+ + LG P+L LH G + ++ A + Sbjct: 27 DTIVVLAQDGKVQYVSPALTTVLGYRTGDWLGQPVLQHLHPEDIGLVKSHLSQLWQAPDT 86 Query: 625 RSAIEQDVVLHCRSGGSYDVHYSITPLSTL-DGSNIGSVLVIQDVTES-------RKMLR 676 E L CR + T + L D G VL +++ + R + Sbjct: 87 CLTWE----LRCRHAEGTWMTLECTGKNLLYDPFLQGVVLYWRNINQRKATEETLRSVEA 142 Query: 677 QLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAG 736 +LS+ + HD LT L NR +FE L L S Q H L ++D+D+F+ +ND+ G+ AG Sbjct: 143 RLSWQSQHDPLTGLLNRTAFESVLLKTLHQSLSEPQPHVLCYLDIDQFRIINDACGYRAG 202 Query: 737 DALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWE 796 D LL ++ASL+ + L +D ARL D FG+LL C++E AR + R+ + + FIW+ Sbjct: 203 DELLCQVASLVQNSLAVTDTFARLNSDSFGILLAQCSLEQARQLMERLRQKIQECRFIWQ 262 Query: 797 GRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAA 856 ++ S G+ A +++ A+ ACY +K GR R ++ +R A Sbjct: 263 DKMFVTTVSIGLVEFSPATPNLASLLNAAEAACYVAKERGRNRCHNFQSDDIELVQKRGA 322 Query: 857 MSLDEQW-----RMIKENQLMMLAHGVASPRIPEARNL--WLISLKLWSCEGEIIDEQTF 909 + QW + + EN+ + + P +A + + + L+L G+++ F Sbjct: 323 V----QWLSYLNKALAENRFRLFFQTI-RPLGKDAAPIDHYEVLLRLEDNGGQLVSPAVF 377 Query: 910 RRSFSDPALSHALDRRVFHEFF-----------QQAAKAVASKGISISLPLSVAGLSSAT 958 + L +DR V F AA + + ++ LS A ++ Sbjct: 378 IGAAERFNLMPNIDRWVIKTLFALIREQLIPQPDPAALSQEEQHCFYAVNLSGASINDDR 437 Query: 959 LVNDLLEQLENSPLPPRLLHLIIPAEAILDH----AESVQKLRLAGCRIVLSQVGRDLQI 1014 L+ LLE+ + S +PP ++ I + + A+ +++L+ GCR L G + Sbjct: 438 LIEFLLEEFQTSGVPPAMICFEITETVAISNLGKAAQLIRELKKLGCRFALDDFGSGMSS 497 Query: 1015 FNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTL 1074 F LK DYL +DG N+ + +D ++ IQ +Q + ++TIA V +++ + Sbjct: 498 FGYLKNLPVDYLKIDGNFIRNIINDSIDLAMVRAIQQISQVMQIETIAEFVENQSILEAI 557 Query: 1075 SGIGVDLIYG 1084 S +GV+ G Sbjct: 558 SDLGVNYAQG 567 >UniRef50_Q47JT9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47JT9_DECAR Length = 694 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 128/432 (29%), Positives = 208/432 (48%), Gaps = 21/432 (4%) Query: 677 QLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAG 736 QL++ A HDALT L NR FE +L L +V + A++F+DLDRFK VND+ G+ AG Sbjct: 261 QLAFQARHDALTGLLNRREFEHRLEKALASVQAGGDEFAILFLDLDRFKQVNDTCGYLAG 320 Query: 737 DALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWE 796 D LLR++A L LR D LARLGGDEF ++L +C A +A I Y FIW+ Sbjct: 321 DELLRQMALLFQGRLREEDTLARLGGDEFSIMLANCTGARALQVADDICGLAAAYRFIWQ 380 Query: 797 GRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYE-------PQQAA 849 +V +GAS GIT ++ E+++ D AC+ +K GR RV E +A+ Sbjct: 381 DKVFAIGASVGITTVNRKVRNINEILAAGDAACHRAKESGRNRVCEQEVTFNQERRHEAS 440 Query: 850 AHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQTF 909 + R A +L E +++ L L H AS + E ++ +L + Sbjct: 441 NWASRIANALSEDRLLVEAVPLRALQH-AASGHVVE------LTARLNEPGQPPVALAAL 493 Query: 910 RRSFSDPALSHALDRRVFHEFFQQAAKAVAS-KGISISLPLSVAGLSSATLVNDLLEQLE 968 + L+ A+DRR+ A+A + + +PLS + +SS ++ + L Sbjct: 494 IDAAERYDLAPAIDRRLIDTAIAAQARAKRQHRNLYCLVPLSRSSISSRETIDYIARSLS 553 Query: 969 NSPLPPRLLHLIIPAEAILDH-----AESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMA 1023 + + L + +E IL H E +++ GC+I L G L F+ L++ Sbjct: 554 SQNMAGNKLCFMF-SEDILTHLTSQAMEFSRQVHTLGCQIGLDDFGGGLSSFSHLRSITP 612 Query: 1024 DYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIY 1083 ++ L L ++ GN L+ +Q +++IA + ++ L +G+D Sbjct: 613 SHVKLSRSLTRDLGGNRASTALLRAVQEITADQHIRSIAEDIDDLDTLEQLKDLGIDYAQ 672 Query: 1084 GEVIADAQPLDL 1095 G+ IA +P ++ Sbjct: 673 GKAIAPNEPFEV 684 >UniRef50_UPI0001C30E99 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C30E99 Length = 994 Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 171/624 (27%), Positives = 279/624 (44%), Gaps = 51/624 (8%) Query: 507 ITVKDGIRH-------IRALANRVLN-KEGEVERLLGINMDMTEVKQLNEALFQE----- 553 ITV IRH I A V++ GE++ I D++E + +EA +E Sbjct: 376 ITVTSRIRHRDGRYVWIEARVRGVVDPATGEMKEGQAIVRDVSE-RVASEAALRESVERI 434 Query: 554 ---KERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGD 610 ++R ++ + D+ + +N ++G+T+EE + ++FG+ Sbjct: 435 AAAEQRFRTAFEAAPIGMALSDLEGRFIQVNDALCAITGYTREE--------LEEMSFGE 486 Query: 611 ---------NGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGS 661 +M ++ S + S +E+ V VH ++ + DGS Sbjct: 487 LSHPADVEREAEMMASLLSGEQSTYWMEKRYVDVVGQVVWVAVHATL--VRAADGSPQHF 544 Query: 662 VLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDL 721 + IQDV+E + QL + A HD LT L NR SFE++L + V A + +D+ Sbjct: 545 LGQIQDVSERVRYEAQLQHMADHDPLTGLLNRRSFERELNQHIHRVERYGAEGAALVLDI 604 Query: 722 DRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIA 781 DRFK +ND+ GH GD L+ ++A + S LR SDVLARLGGDEF +LLP + A +A Sbjct: 605 DRFKHINDTLGHNVGDELIVKVAQTLRSRLRDSDVLARLGGDEFAVLLPKGGQQEAEAVA 664 Query: 782 TRIISAVNDYHFI-WEGRVHRVGASAGITLIDDNNHQAAE-VMSQADIACYASKNGGRGR 839 I+++V + GR + S GI L + +AE V+ AD+A Y +K GR R Sbjct: 665 ESILASVRAQSVLTTAGRRRPITTSVGIALFGETGGLSAEDVLVNADLAMYDAKEAGRDR 724 Query: 840 VTVYEPQQAAAHSERAAMSLDEQWR-MIKENQLMMLAHGVASPRIPEARNLWLISLKLWS 898 + Q+ A +A ++ E+ R ++E++ + A + R R ++ L++ Sbjct: 725 AATFSSQERGASRMKARITWAERIRDALEEDRFTLYAQPIVELRSGAVRQHEVL-LRMLD 783 Query: 899 CEGEIIDEQTFRRSFSDPALSHALDR----RVFHEFFQQAAKAVASKGISISLPLSVAGL 954 +GE+I F L +DR R E QQ A + + + +S A Sbjct: 784 EQGEVIPPAAFIGVAERFDLMQEIDRWVVARAIKEMGQQRR---AGRDLVFEVNISGAST 840 Query: 955 SSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQKL--RLA--GCRIVLSQVGR 1010 L+ + +L + + P L L + + + Q+ RLA GCR L G Sbjct: 841 GDPDLLTIIERELRENEIDPINLVLEVTETTAVANIPRAQEFAARLAELGCRFALDDFGA 900 Query: 1011 DLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLV 1070 F LK D L +DGE + + D++LI A+ +G +TIA V Sbjct: 901 GFGSFYYLKHLPFDILKIDGEFVRSCTTSQTDQLLIRAAVEIARGMGKETIAEYVGDDET 960 Query: 1071 MDTLSGIGVDLIYGEVIADAQPLD 1094 ++ L +GVD G + PL+ Sbjct: 961 VELLRTLGVDYAQGFHLGRPAPLE 984 Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 58/141 (41%), Positives = 89/141 (63%) Query: 289 AFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQ 348 A R + I+ +E FR A E + IGMAL EG+++Q N ALC GY++EEL ++F Sbjct: 426 ALRESVERIAAAEQRFRTAFEAAPIGMALSDLEGRFIQVNDALCAITGYTREELEEMSFG 485 Query: 349 QLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFI 408 +L+ P D+ ++ + + L+SGE +TY MEKRY + G VVW + +LVR DG+P +F+ Sbjct: 486 ELSHPADVEREAEMMASLLSGEQSTYWMEKRYVDVVGQVVWVAVHATLVRAADGSPQHFL 545 Query: 409 AQIEDINELKRTEQVNQQLME 429 QI+D++E R E Q + + Sbjct: 546 GQIQDVSERVRYEAQLQHMAD 566 >UniRef50_Q30T73 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30T73_SULDN Length = 707 Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 164/696 (23%), Positives = 311/696 (44%), Gaps = 47/696 (6%) Query: 425 QQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP-HIKPNWQVWYECVLPED 483 + L+ + A E IG W+ + N W + ++ + P +KP+++ ++ V +D Sbjct: 32 KSLIRNLNEAQEIAQIGHWKLNINTNELFWSDETYRIFGLKPKEVKPSYENFFTFVHEDD 91 Query: 484 RQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLNKEGEVERLLGINMDMTE 542 R SL+ +SP+ + RI KD ++++ L++ G V + +G D+TE Sbjct: 92 RSLVNDAYIKSLEDKSPYSIIHRIITKDKKLKYVEERCVHKLDESGNVVKSIGTVHDITE 151 Query: 543 VKQLNEALFQEKERLHITLDSI---GEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGV- 598 + EKE L I + + +V D I +N EK++G+++EE +G Sbjct: 152 ------RVEHEKE-LEIASNVFKYSSDGIVITDKNNNIVSVNKSFEKLTGYSKEEIIGKN 204 Query: 599 PLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSN 658 P L L +GD +N++S+ S ++ + G Y + +I + + Sbjct: 205 PKL--LSSGWGDE-EFYKNMWSSLLSNDLWRDELWDRKKDGSLYAIEQTIICVRDKNQDI 261 Query: 659 IGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVF 718 + + + +D+TE++ ++ A +D LT L N F++++ +++ + ++ A++F Sbjct: 262 VNYIGMSRDITEAKNKEEKIHQLAFYDFLTKLPNAKLFQQEVEAYIKSTHYNNETFAILF 321 Query: 719 IDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESAR 778 +DLD FK VNDS GH GD LL E+A+ + ++ +++RLGGDEF +L P N+ + Sbjct: 322 LDLDNFKWVNDSLGHQIGDLLLIEIAAKLKEIISQDSIISRLGGDEFVILAPYENLLTIS 381 Query: 779 FIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRG 838 +A I+ +V D + + R V S GI+L N +++ AD A Y SKN RG Sbjct: 382 QLANTILCSVKDPIKV-QNREVNVSWSIGISLYPQNGENYNDLLKNADAAMYESKN--RG 438 Query: 839 RVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPR--IPEARNLWLISLKL 896 + T + LD + R N L + P+ + + + +L Sbjct: 439 KNTFRYFNDMMNQDAMYRLELDTKLRYAITNNSFFLNY---QPKYSFEHGKTIGVEALIR 495 Query: 897 WSCEG----------EIIDEQTFRRSFSDPALSHAL-DRRVFHEFFQQAAKAVASKGISI 945 W + I +E ++ + AL D ++ + + S ISI Sbjct: 496 WIDKDLGFIAPDKFIPIAEESSYINEIGSWVMKQALNDLKIIN--------SKLSSPISI 547 Query: 946 SLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESV----QKLRLAGC 1001 S+ +S L + ++ L+ S + P L+ I +I+ + + V +K+++ G Sbjct: 548 SINVSGKQLEHESFYDEARTLLKESGIEPSLVEFEITETSIMQNIDHVVDILKKIKMLGV 607 Query: 1002 RIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTI 1061 +I + G + LK D L +D E ++ + + ++ I A+ + T+ Sbjct: 608 KISIDDFGTGYSSMSYLKKLPIDTLKIDREFIKELEIDEDSKSIVNAIIALAKSFKLTTV 667 Query: 1062 AGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 A V L G+ D+ G + + LD L+ Sbjct: 668 AEGVENEEQKLILDGLNCDMTQGYLYSRPLSLDDLL 703 >UniRef50_C6HZ81 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HZ81_9BACT Length = 706 Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 160/576 (27%), Positives = 268/576 (46%), Gaps = 25/576 (4%) Query: 492 RDSLQSRSPFKLEFRITVKDGIRHI-RALANRVLNKEGE--VERLLGINMDMTEVKQLNE 548 R++ S S +++E+R KDG A ++L+ +G + + D++ +QL Sbjct: 78 REAEDSLSAYEVEYR--RKDGSTFPGEASGRKILSSKGSGAIAGYMVTIRDISRRRQLMN 135 Query: 549 ALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITF 608 AL +EKE+ +TL S+GE V+ D + +TFMNP AE ++GW+ EA G P+ TV Sbjct: 136 ALAREKEQWFVTLKSLGEGVIVTDASGLVTFMNPAAEILTGWSFLEASGQPVGTVYLAVS 195 Query: 609 GDNGPLMENIYSADTSRSAI---EQDVVLHCRSGGSYDVHYSITPLSTLDGS-NIGSVLV 664 + + + S I L R G V S +P+ DG G VLV Sbjct: 196 EETQERQADPVARCLSAGHIVGLSNHTCLLTRHGRKLAVEDSASPIR--DGERTTGVVLV 253 Query: 665 IQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRF 724 +DVTE R+M RQL++ A +D LT + NR F + L + AL+++DLD F Sbjct: 254 FRDVTEKREMERQLAHQARYDYLTQIPNRVLFHDRFDQALARARRSGSPLALLYMDLDSF 313 Query: 725 KAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD-CNVESARFIATR 783 K +ND+ GHAAGD +LR+ A ++ +R D +AR+GGDEF +++ E R Sbjct: 314 KEINDTLGHAAGDIVLRQAAERLVKAVREEDTVARMGGDEFTVIMTGFSGREEVVTSVGR 373 Query: 784 IISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVY 843 + A+++ + G+ V AS G+ + ++ +A ++ ADIA Y +K V + Sbjct: 374 LFLALSEPMMVG-GQEVSVTASVGVAVFPEDGEEADSLLRHADIAMYKAKERRGNAVVFF 432 Query: 844 EPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWS--CEG 901 +R + S D + R ++ ++L++ I R + +L W+ +G Sbjct: 433 RADLTGELEKRVSFSADFR-RALERSELLLEFQ--PEVEIVSGRIRGVEALLRWNHPLQG 489 Query: 902 EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQA---AKAVASKGISISLPLSVAGL-SSA 957 ++ E +F L L V + +QA A + +S+ LSV L S Sbjct: 490 RLLPE-SFLPQLLRGGLMAELSLWVLKKAARQALAWPHASGEPPLPVSVNLSVRELRGSV 548 Query: 958 TLVNDLLEQLENSPLPPRLLHLII--PAEAILDHAESVQKLRLAGCRIVLSQVGRDLQIF 1015 + V L E L + LPP L + I P + D + +R G ++V G + Sbjct: 549 SPVVRLREVLAETGLPPERLEIEIAFPEGRLGDDVPVLGGMRDLGVKLVADDFGEGIVSL 608 Query: 1016 NSLKANMADYLLLDGELCANVQGNLMDEMLITIIQG 1051 + L++ + D + L +L D +++G Sbjct: 609 DILRSGLFDRVKLSRQLSPGGDSGGFDPKAAAMLRG 644 >UniRef50_C6WWW7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WWW7_METML Length = 944 Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 145/545 (26%), Positives = 245/545 (44%), Gaps = 32/545 (5%) Query: 561 LDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYS 620 LD+ +V D K+T +N E++ GW + G L+ L G G L + +Y Sbjct: 408 LDTAQVVIVTQDGNGKVTSINHYGEQLLGWDERNLQGKSLIDALEKP-GGRGQLRQ-VYQ 465 Query: 621 ADTSRSAIEQDVVLH-CRSGGSYDVHYSIT-PLSTLDGSNIGSVLVIQDVTESRKMLRQL 678 + S D H C +++V I S +DG + + V D+T ++ + Sbjct: 466 GIIANSV---DTHYHECTMLCNHEVKREIAWHHSRMDGEQVQILSVGVDITLRKRSEEKS 522 Query: 679 SYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDA 738 Y A HD LT L NR F +++ L +N T AL+++DLD FK +ND +GH AGD Sbjct: 523 LYLAEHDQLTGLINRQRFMQEIEAALVRLNGTSACEALLYLDLDGFKYINDISGHTAGDM 582 Query: 739 LLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGR 798 +LR +A ++ ++ + D LARLGGDE G+L+ DC++ A IA I + + + Sbjct: 583 VLRTVADILSNICDTQDTLARLGGDEMGILVRDCDLPRAISIAEEINRQLGEIKYPGLAG 642 Query: 799 VHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEP--------QQAAA 850 H + AS GI + NNH A +++ ADIA Y +K G R+ V+ +Q Sbjct: 643 DHHITASIGIVAVSANNHDAKRLLANADIAMYQAKLTGSARLHVFSEGEHLQQKLEQKVL 702 Query: 851 HSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQTFR 910 +R +L EQ +++ ++ + V S + +++ G ++ F Sbjct: 703 WEDRIKQALREQSFVMQYQPILDIHQNVISH--------YEALVRMVDENGAMVPPGEFI 754 Query: 911 RSFSDPALSHALDRRVFHEFFQQAAKAVA-SKGISISLPLSVAGLSSA---TLVNDLLEQ 966 L +D V ++ A+ +A K +++ LS ++ TL+ L Sbjct: 755 EFAERSGLIKQIDHYVVRTVIKRWAELLAEGKDRKVAINLSGHSMNDENMLTLLQSLF-- 812 Query: 967 LENSPLPPRLLHLIIPAEAILDHAES---VQKLRLAGCRIVLSQVGRDLQIFNSLKANMA 1023 L++ LP ++ I A+ D A + ++ +R GC L G F +K Sbjct: 813 LQHPELPSHIIFEITETAAVADFATAQTFIETIRALGCAFSLDDFGVGFSSFYYVKHFPV 872 Query: 1024 DYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIY 1083 DY+ +DG N+ + D++ + + A+ G +T+A V + L GVD Sbjct: 873 DYVKIDGSFIRNLADSTDDQIFVRALTEVARGFGKRTVAEFVGDQRCLTLLRSYGVDYAQ 932 Query: 1084 GEVIA 1088 G I Sbjct: 933 GYFIG 937 >UniRef50_B5ERX6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Acidithiobacillus RepID=B5ERX6_ACIF5 Length = 1045 Score = 168 bits (426), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 110/308 (35%), Positives = 168/308 (54%), Gaps = 17/308 (5%) Query: 542 EVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLL 601 E + + L++EKER +TL SIG+AV+ D ++ MN VAE + G+ + EA+G PL Sbjct: 355 ERQSAEQTLWEEKERAEVTLHSIGDAVITTDTEGRVMDMNVVAEALMGYARTEAVGRPLE 414 Query: 602 TVLHITFGDNGPLMENIYSADTSRSAIEQDVVLH--------CRSGGSYDVHYSITPLST 653 V I + ++N R +E+ V+ + G + S P+ Sbjct: 415 DVFRIVQEGSHAHLDN-----PVRRVLEEGQVVRLANHTMLLTKDGQERAIEDSAAPIRD 469 Query: 654 LDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQL-RILLQTVNSTHQ 712 G +G VLV DVTE R+++ +L++ A+HDALT L NR F +L QT+ H Sbjct: 470 RQGVLLGVVLVFHDVTEKRRLIAELAHQATHDALTGLPNRVLFMDRLGHDRAQTLRHEHL 529 Query: 713 RHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC 772 A+ +DLD FK VND GHAAGDALL+E+A + +RS D LAR+GGDEFGLLL D Sbjct: 530 L-AVGILDLDGFKQVNDHFGHAAGDALLQEMAQRLRREMRSGDTLARMGGDEFGLLLSDV 588 Query: 773 -NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYA 831 ++E TR++ + ++ + + + +S G+T ++ +++ AD+A YA Sbjct: 589 GSLEQVEDACTRLLEVLRAPFYLGDEEI-PLSSSIGLTSYPLDDSLPEDLLRHADLALYA 647 Query: 832 SKNGGRGR 839 +K GR R Sbjct: 648 AKAAGRDR 655 >UniRef50_C0N942 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N942_9GAMM Length = 945 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 146/578 (25%), Positives = 262/578 (45%), Gaps = 36/578 (6%) Query: 531 ERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGW 590 ER +N+ E++ E++ + +D+ ++ +D KI N +E+M+G Sbjct: 378 ERTDSLNLRTVELRD-------ERDFVKNLIDTAQLMIITLDKQCKIISFNQFSEQMTGC 430 Query: 591 TQEEALGVPLLTVLHITFGDN-GPLMENIYSADTSRSAIEQDVVLHCRSGGSYDV----H 645 ++++ +G + + DN + + + + S +E D + G V H Sbjct: 431 SEQDVVGTAIQPFFNAQQWDNVHATLNELTHSHLAVSQLETDFI---HKNGDVRVISWLH 487 Query: 646 YSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQ 705 S+T + D + I SV + DVT+ ++ Q+ + A+HDALT L NR F + LL Sbjct: 488 SSLTVAN--DDAVILSVGL--DVTDKKRSEEQMLWMANHDALTELYNRRKFNSDFKKLLN 543 Query: 706 TVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEF 765 + L+F+DLD+FK +NDS GH GD LL+ +A +L++ RS+D++ARLGGDEF Sbjct: 544 QAQRYKREGMLLFLDLDQFKDINDSCGHNVGDQLLQRVAQSLLAISRSTDIVARLGGDEF 603 Query: 766 GLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQA 825 ++LP+ ++ A + +I ++ + F E + + S GIT NN E++S A Sbjct: 604 AIILPETDLHGAITLCEKITDSLKNIDFSHEQARYTISCSIGITKFPLNNLTVDELVSNA 663 Query: 826 DIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRM-----IKENQLMMLAHGVAS 880 D+A Y +K+ G+ ++ A R + +W+ + N+ + + Sbjct: 664 DMAMYQAKSKGKNTWHLFTFDDMA----RTELKARVKWKQKIVDALNHNRFQLFYQPIMH 719 Query: 881 PRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQ-AAKAVA 939 + + + L++W ++ F + L H +D V + + A + + Sbjct: 720 IQSRTVSHYEAL-LRMWDDNDQLHLPGLFIQVAEQTGLIHRIDHYVLEQGVAKIAEQNLQ 778 Query: 940 SKGISISLPLSVAGLSSATLVNDLLEQL--ENSPLPPRLLHLIIPAEAILD---HAESVQ 994 + IS+SL LS + L LLE L + +L+ + A+ D E +Q Sbjct: 779 HQDISLSLNLSGHAVVDPEL-QPLLEHLITQYGAQADKLIFELTETAAVADIPQARELMQ 837 Query: 995 KLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQ 1054 +L GCR + G F L+ + +DG ++ N D + + + A+ Sbjct: 838 ELIRLGCRFSIDDFGTGFASFRYLRELPVSLVKIDGSFITHITENEDDRLFVQALVTIAK 897 Query: 1055 RLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQP 1092 +G +TIA V + L +GVD G I QP Sbjct: 898 GMGKQTIAEFVENAETLALLETLGVDYAQGYYIGKPQP 935 >UniRef50_Q6M6C9 SENSORY BOX/GGDEF FAMILY PROTEIN n=3 Tax=Corynebacterium glutamicum RepID=Q6M6C9_CORGL Length = 1018 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 147/490 (30%), Positives = 227/490 (46%), Gaps = 18/490 (3%) Query: 626 SAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLV-IQDVTESRKMLRQLSYSASH 684 + + D L G +V S + + + G IG++LV + DVTE ++++ + + A H Sbjct: 531 AVVHLDRSLETLRGKQKNVAMSFSSMGNV-GGRIGTLLVNVVDVTERQELIELVEHLADH 589 Query: 685 DALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELA 744 D+LT L NR E + L+ AL+ +DLD FK VNDS GH AGD LL E A Sbjct: 590 DSLTGLVNRRRLESDIEELILKNERDSTDSALLLLDLDYFKEVNDSLGHEAGDQLLIEFA 649 Query: 745 SLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRV-HRVG 803 ++ +R SD++ R+GGDEF ++LPD + + A I RII VN HF G+V RV Sbjct: 650 EILKDSVRDSDIVGRIGGDEFVIVLPDTDRDGAEAIGIRIIELVNQ-HFKGRGKVLSRVS 708 Query: 804 ASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQW 863 S G TL D Q AD Y +K+ GR RV V + S + A S++E Sbjct: 709 VSIGGTLFSDARAQGVNPFILADQLLYDAKHAGRNRVAVRRAENTIVRSAKPAFSVEELS 768 Query: 864 RMIKENQLMMLAHGV---ASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSH 920 +++ + + + + + R+ A L I+L +G + F +S L+ Sbjct: 769 EILESHSIRLELQPILELETGRVGAAEGLLRINL-----DGTDVPTGQFVQSVEQAGLAP 823 Query: 921 ALDRRVFHEFFQQAAKAVA-SKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHL 979 LD V E + A S++L LS LSSA + +L + LP + Sbjct: 824 KLDIAVMREGINHIERLRAVCPTFSLALNLSGYSLSSAKIREELRAEFRARDLPRGSIRF 883 Query: 980 II----PAEAILDHAESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCAN 1035 I P E I E VQ L+ G IV+ G + + LK L + GE Sbjct: 884 EITETAPIEDIDAAKEFVQMLKDFGFHIVIDDFGAGHEPYQYLKKFDFSVLKIAGEFIEG 943 Query: 1036 VQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDL 1095 + N +D ++ I A+ M+T+A V +++ + IGV G I ++P+D Sbjct: 944 MVTNRVDRSIVESIAQLAKDEEMETVAEFVSSKEILEAVREIGVTYAQGFHIGKSKPIDE 1003 Query: 1096 LVNSSYFAIN 1105 + ++Y N Sbjct: 1004 FI-ATYLETN 1012 >UniRef50_B4S311 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=4 Tax=Alteromonas macleodii RepID=B4S311_ALTMD Length = 945 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 116/440 (26%), Positives = 208/440 (47%), Gaps = 17/440 (3%) Query: 665 IQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRF 724 I D+TE ++ L Y A+HD+LT + NR FE R L + ++F+DLDRF Sbjct: 506 IIDITEKKQSDLSLQYLATHDSLTGVYNRRQFETDFREKLS--QKSDIPVCILFMDLDRF 563 Query: 725 KAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRI 784 K VND+ GH AGD L++++A L+ + L +LARLGGDEFG++ D + A +I Sbjct: 564 KVVNDTCGHKAGDVLIKDIARLIENTLHDEALLARLGGDEFGVIYTDVDANEVYLNAVKI 623 Query: 785 ISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYE 844 ++AV Y F+W+ R+ +G S G+ + +D A + +S AD ACY +K GR +V Y Sbjct: 624 LNAVQAYRFMWDNRIFNLGVSIGMVVCEDTEVNAGQYLSMADAACYFAKEQGRNQVHRYN 683 Query: 845 PQQAAAHSERAAMSLDEQW-----RMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSC 899 + +R LD W ++E + + + + + + L+L Sbjct: 684 KDDESM--QRYQRELD--WVSSINNALEEGRFELYYQSLRPLNQTTDGHYYEVLLRLREK 739 Query: 900 EGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVA--SKGISISLPLSVAGLSSA 957 G +++ F + ++ +D+ V F+ ++ ++ S+ L+ L+ Sbjct: 740 NGNLVEPANFLPTAERFEMNVNVDKWVVTNTFKWLSENPEHLAELKRCSINLNCHSLADR 799 Query: 958 TLVNDLLEQLENSPLP-PRLLHLIIPAEAILDHAESVQKLRLA---GCRIVLSQVGRDLQ 1013 +L E +P ++ +I + AI+ +++ +R GC L G Sbjct: 800 DFTLFILNAFETFNIPYNKVCFEVIESVAIIKMEDTLSFMRTFNRLGCSFALDDFGSGFS 859 Query: 1014 IFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDT 1073 ++ LK+ + + +DG ++ + +D ++ I A+ +GM+T+ V + Sbjct: 860 SYSYLKSLPVNQVKIDGMFIKDMLNDSVDTAMVASINDVAKAMGMQTVGEFVENEGTLAQ 919 Query: 1074 LSGIGVDLIYGEVIADAQPL 1093 L +GVD G +A PL Sbjct: 920 LGKMGVDFAQGYGVAKPAPL 939 >UniRef50_B1XXC7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XXC7_LEPCP Length = 755 Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 122/347 (35%), Positives = 178/347 (51%), Gaps = 7/347 (2%) Query: 503 LEFRITVKDGIR-HIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITL 561 +E+R+ DG R + A + +G + R + D+T K+L E L E ER +TL Sbjct: 408 VEYRLMRSDGQRIDVLLSATTERDADGRITRTHAVLEDITR-KRLAEELEAEHERSKVTL 466 Query: 562 DSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLH---ITFGDNGPLMENI 618 +SI +AV+ D +I ++NPVA M G +E+ G VL + G P + Sbjct: 467 ESIADAVITSDPQGRILYLNPVAVTMIGQPEEQVRGRLYGEVLRRRDVETGAELPDPVAL 526 Query: 619 YSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQL 678 R A+ Q V L G + V S++P+ G IG+V V+ DVTE+ ++ +L Sbjct: 527 CLHQRKRLALPQRVRLAHAEGSEHVVQESVSPMFAAGGQLIGAVAVMHDVTEAHQLALKL 586 Query: 679 SYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDA 738 ++ A HD LT L NR +L LQ AL+F DLDRFKAVNDS GHA GD Sbjct: 587 AHRAQHDVLTGLPNRLLLHDRLHQGLQLARRNRTVLALMFFDLDRFKAVNDSHGHATGDE 646 Query: 739 LLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVES-ARFIATRIISAVNDYHFIWEG 797 LL ++A +L LR++D RLGGDEF +LL S A +AT ++ A+ + + + Sbjct: 647 LLCQVADRLLKQLRATDTACRLGGDEFVVLLSQVEQASDAGDVATHLLEALCKPYQLGKH 706 Query: 798 RVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYE 844 + + AS GI + A +M AD A Y +K GR RV ++ Sbjct: 707 QAD-ISASIGIACFPQDGTDEATLMRNADAAMYQAKQQGRNRVVFFK 752 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 99/414 (23%), Positives = 183/414 (44%), Gaps = 15/414 (3%) Query: 14 HPLLHLVSLGLVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRHAGRMWPGIALSCS 73 P L + L +++ + ++ LS+F Q+A LW+ + R WPG+ L+ + Sbjct: 43 QPWLMWLIAALGAWVLSSLAMWLSRFPGQVASLWYMNVWGLALLLPVPRRQWPGLLLALA 102 Query: 74 LGNIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQNLADWLRLALGSAI 133 LGN+AA++ + + + N++E ++GA LLR + + D L++ L ++ Sbjct: 103 LGNLAANLAFGDSLLEALRYLPPNLIEMLLGAWLLRGSESYRRIASSPVDGLKVLLRGSL 162 Query: 134 VPPLLGGVLVVLLTPG---DDPL-RAFLIWVLSESIGALALVPLGLLFKPHYLLRHR--- 186 + P+L G +LT G D PL R L W S +G++ L+PL L R Sbjct: 163 L-PVLAGSATAVLTLGWQDDTPLFRIALTWFESTLVGSVTLLPLVLAVLAAERGAVRRDF 221 Query: 187 -NPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFLTTVMM 245 +PR +L+++ + + +L LP+PF ++ + L+ +AV+L R A + + M Sbjct: 222 ADPRAWAFALVSVGVGV----FCLLQLPFPFVYLTLPLVLAAVQL-RFMAVAALVWLMAM 276 Query: 246 VSLMMAADPSLLATPRT-YLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHF 304 V + A +A P+T Y + + P L LLP ++ + R +S S Sbjct: 277 VVGTLIAQGLFVAPPQTAYWQQLLVYAPLLAALLPPLLLAAAVEQARNHHGELSRSRERL 336 Query: 305 RNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVE 364 R E + M +G+ L ++ + +G ++++ G E + L + Sbjct: 337 RTLYERTPAMMVSTDPDGRLLSVSRLWLERMGLRRDDVIGRKLVDFLAAESRRRTLTRTW 396 Query: 365 KLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELK 418 + +E R +G + LL+ + R DG A +EDI + Sbjct: 397 PDLLAAGRCRDVEYRLMRSDGQRIDVLLSATTERDADGRITRTHAVLEDITRKR 450 >UniRef50_B7K9S9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7K9S9_CYAP7 Length = 1015 Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 126/371 (33%), Positives = 187/371 (50%), Gaps = 13/371 (3%) Query: 479 VLPEDRQHAEKV-IRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGIN 537 V PED A V R LQ+ LE +I V+ +R ++ + + G + + GI+ Sbjct: 385 VFPEDIADAFVVNDRQVLQAGESLSLEEQIIVERQLRTYLSVKFPLYDPNGLLYGIGGIS 444 Query: 538 MDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALG 597 D+TE KQ EAL Q+ LD EA++ D ITF N AE++ GW + +ALG Sbjct: 445 TDITERKQAEEALRQQAN----LLDLAYEAILVRDGNNVITFWNQGAEQLYGWKKSQALG 500 Query: 598 VPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGS 657 +L F + P + I + + + H R G+ + S L D Sbjct: 501 QVSHILLQTEFNLSSPHFDAILRL----TGHWEGELTHTRQDGTKIIVESRQVLVQDDRG 556 Query: 658 NIGSVL-VIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNST-HQRHA 715 I +L V +D+TE + QL ++A HDALT L NR ++++ +Q H A Sbjct: 557 QIKGILEVNRDITERKLAQFQLEHNALHDALTELPNRLLLMERIQAAIQRAKRKPHYHFA 616 Query: 716 LVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE 775 L+FIDLDRFK +ND+ GH GD LL +A+ + +RS D +ARLGGDEF +LL D E Sbjct: 617 LLFIDLDRFKTINDTLGHLVGDHLLVAIATRLQHCVRSGDTVARLGGDEFIILLDDLLEE 676 Query: 776 SARF-IATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKN 834 S F I RI+ + + I ++ + AS GI D N +++ AD+A Y++K Sbjct: 677 SDAFPITERILGRIKEPLVINNQQI-QTSASIGIVFNRDGNESETDLLRNADLAMYSAKE 735 Query: 835 GGRGRVTVYEP 845 G+ R V+ P Sbjct: 736 QGKSRYAVFNP 746 >UniRef50_Q31NI4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Synechococcus elongatus RepID=Q31NI4_SYNE7 Length = 929 Score = 165 bits (418), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 214/839 (25%), Positives = 349/839 (41%), Gaps = 97/839 (11%) Query: 297 ISESETHFRNAMEYSAIGMALVGTEG-QWLQTNKALCQFLGYSQEELRGLTFQQLTWPED 355 ++ESE+ +R E + M + +G Q+L N+A QF GYSQ+E +T + E+ Sbjct: 136 LAESESRYRLLFEANPEPMWVFAKQGLQFLAVNQAASQFFGYSQQEFLAMTVLDIQSEEE 195 Query: 356 LNKDLQQVEKLISGEINTYSMEK-RYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDI 414 + LQ E LI +I ++ Y ++ G +V+A + + D P I I DI Sbjct: 196 KTRFLQFFESLICNQIVDPAVGVWAYRHKQGHLVFADVLIHDFEF-DNQPCCLILAI-DI 253 Query: 415 NELKRTEQVNQQLMERI-TLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQ 473 E + ++ Q + L N+ + + S D+R+ Sbjct: 254 TEKQAARELAHQREQAFRKLLNDNRDPLL--------VISGDRRI--------------- 290 Query: 474 VWYECVLPEDRQHAEKVIRDSLQSRS---PF---KL-EFRITVKDGIRHIRALANRVLNK 526 C Q K+ + L+S+S P KL E+ +T+ DG + + Sbjct: 291 ----CYANPAAQKLLKLNLEQLESQSLDLPLLSDKLTEWALTLPDGSVAEVEIHRSETDW 346 Query: 527 EGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEK 586 EG+ LL + D+ E K + L KE L + + + V I+ M + ++NP E+ Sbjct: 347 EGQPADLLSLR-DIAERKASEQQLRLLKESLEASFNGVV-IVDAIEPDMPVIYVNPAFER 404 Query: 587 MSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHY 646 ++G+++ E LG +L D+ + E I+ + + + + G + Sbjct: 405 ITGYSEAEMLGRNC-RILQGNERDSLQI-EEIHRGLSQAENVHVVIRNFRKDGQPFWNDL 462 Query: 647 SITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQT 706 I+P+ G+ + V D+TE ++ +LS+SASHD LT L NRA E +LR + Sbjct: 463 YISPIFNAQGNVTHFIGVQNDITEQKRYEEELSFSASHDVLTGLPNRAVLEDRLRQGCKM 522 Query: 707 VNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFG 766 A++FIDLD FK +NDS GH +GD LL E+A M +R+ D +AR+GGDEF Sbjct: 523 ALRQKHSLAILFIDLDGFKLINDSIGHRSGDLLLVEVAQRMCEQVRAGDTVARIGGDEFI 582 Query: 767 LLLPDCNVESARF-IATRIISAV-NDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQ 824 +LL D +E+ IA R++++V YH +G V AS GITL D + Q +++ Q Sbjct: 583 ILLVDLKLENDVISIADRLLASVARPYHI--QGIYLHVTASMGITLSDGDIEQPTQLIQQ 640 Query: 825 ADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIP 884 AD+A Y +K GR Y + + L E+ + E Q + Sbjct: 641 ADLAMYKAKQEGRNNYQWY--------TNDLNLRLRERVHLRNELQKAIET--------- 683 Query: 885 EARNLWLISLKLWSCEGEIIDEQTFRR------SFSDPA--LSHALDR------------ 924 EA L+ K+ C G++I + R F PA + A D Sbjct: 684 EAFELYF-QPKIEGCSGQVIGLEALLRWQHPQMGFISPATFVPIAEDTGQIIPLSQWVLE 742 Query: 925 ---RVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLII 981 R + QQ A S+++ +S V + L+ L L + I Sbjct: 743 TACRQLRDLLQQGIAAP-----SVAVNISTVQFRRINFVKSVQSALQKYQLKSEHLEIEI 797 Query: 982 PAEAILDHA----ESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQ 1037 + D+ E +Q+L+ G I + G + LK D + +D + Sbjct: 798 TENVLFDNTEKAIEKLQRLKELGVNISIDDFGTGFSSLSYLKELPIDTVKIDRSFVQEIN 857 Query: 1038 GNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 + D + I A L + +A V L D G A P + L Sbjct: 858 TDSRDAAITQGIISMAHHLRLNVVAEGVETEQQFKFLQQSNCDQYQGYYFAKPMPFEAL 916 >UniRef50_B8GSM8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GSM8_THISH Length = 1301 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 213/846 (25%), Positives = 364/846 (43%), Gaps = 45/846 (5%) Query: 281 NIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQE 340 I + R +S+SE +R A+E + G+ E + ++ LG+ + Sbjct: 343 RIADQLTVDIRDREARLSDSEYRWRFALEGAGDGVWDWNLEDNTVYFSRRWKSMLGFEDQ 402 Query: 341 EL-RGLT-FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWAL-LAVSLV 397 E+ +GL +Q+ P+DL+ L +++ ++G+ Y E R ++G W L + + Sbjct: 403 EIGQGLDEWQRRVHPDDLDSTLAELKGYLNGDRGEYVSEHRMRCKDGSWKWILDRGMVVS 462 Query: 398 RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERI-TLANEAGGIGIWEWELKPN---IFS 453 R G PL I DI+ K E ++++ R+ T+ + G+ ++E+ L+ + F Sbjct: 463 RDGQGRPLRMIGTHTDISGQKALEAAREEILARLQTITSRVPGV-VYEFRLQADGRSCFP 521 Query: 454 W-DKRMFELYEIPPH-IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD 511 + + + ++Y + P +K + + + P+D + I+ S + +P++ E+R+ D Sbjct: 522 YASEAIRQIYRVSPEEVKTDASAVFAILHPDDYDAVVESIQHSARHLTPWRHEYRVKFPD 581 Query: 512 GIRHIRALANRVL-NKEGEVERL-LGINMDMTEVKQLNEALFQ---EKERLHITLDSIGE 566 G +R L L ++E + L G D+TE K+ AL + E +R LD + Sbjct: 582 GT--VRWLYGDSLPHREPDGSTLWYGFITDITERKEAEAALRKAHSETQRFREALDYVSS 639 Query: 567 AVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDN-GPLMENIYSADTSR 625 + D + T+ N ++ G + G + + +++ + + Sbjct: 640 FIYMKDTQSRYTYANRATLELFGTNDHDLPGSDDFRFFSDSTAHRLREIDRHVFLGEQTS 699 Query: 626 SAIEQDVVLHCRSGGSYDVHYSI-TPL--STLDGSNIGSVLVIQDVTESRKMLRQLSYSA 682 IE GG V+ I TP+ T IG + + D+T ++ RQL + A Sbjct: 700 EEIEA-----VDPGGHRRVYLEIKTPIYDETERDEVIGLLGISTDITAIKEHERQLEHIA 754 Query: 683 SHDALTHLANRASFEKQL-RILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLR 741 DALT+L NR +L + + Q V H A+ ++DLD FKA+ND GHA GD LL Sbjct: 755 HFDALTNLPNRVLLADRLHQAMAQAVRRGHHL-AVAYLDLDGFKAINDRYGHAVGDKLLM 813 Query: 742 ELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHR 801 +A M +LR D L+RLGGDEF +L D A + A EGR R Sbjct: 814 AVAQQMHEVLREEDTLSRLGGDEFVAVLLDLADVEACVPLLTRLLAAAARPVSIEGRELR 873 Query: 802 VGASAGITLIDDNNH-QAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLD 860 + AS G+T +A +++ QAD A Y +K G+GR V++ + S R Sbjct: 874 ISASLGVTFYPQAEQIEAEQLLRQADQAMYQAKLAGKGRYHVFDAE--LDRSVRTHHESL 931 Query: 861 EQWRMIKENQLMMLAHGVASPRIPEARNLWLIS----LKLWSCEGEIIDEQTFRRSFSDP 916 E+ R EN +L + P++ R+ +I ++ + ++ F D Sbjct: 932 ERIRSAFENDEFVLHY---QPKV-NMRSGAVIGAEALIRWQHPDKGLLPPGDFLPVIEDH 987 Query: 917 ALSHALDRRVFHEFFQQAAK-AVASKGISISLPLSVAGLSSATLVNDLLEQLENSP-LPP 974 L+ L V QQ A A + +S+ + + L T V+ L L+ P + P Sbjct: 988 PLAIELGEWVITRALQQMASWQTAGLVLPVSVNIGASQLRQDTFVSRLRTLLDGFPEISP 1047 Query: 975 RLLHL-IIPAEAILDHA---ESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDG 1030 L L I+ A+ D A + + R G I L G LK A + +D Sbjct: 1048 GSLELEILETSALGDLALVTRLLDQCRAIGVNIALDDFGTGYSSLTYLKRLPAGVVKVDQ 1107 Query: 1031 ELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADA 1090 ++ + D ++ + G A + IA V D L IG +L G IA Sbjct: 1108 SFIRDILMDPEDLAILDGVLGLAGAFNRQVIAEGVETVEHGDMLLRIGCELAQGYGIARP 1167 Query: 1091 QPLDLL 1096 P + L Sbjct: 1168 MPAEAL 1173 >UniRef50_A4Y0E0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=23 Tax=Pseudomonas RepID=A4Y0E0_PSEMY Length = 766 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 175/694 (25%), Positives = 291/694 (41%), Gaps = 51/694 (7%) Query: 429 ERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPH-IKPNWQVWYECVLPEDRQHA 487 ER+ LA +A G+W+W+ + L + P + W E + PEDR+ Sbjct: 81 ERLRLALDATRDGLWDWDFAAQRVFFSPSYAALLGLTPQALGDTRDAWAERLHPEDRERV 140 Query: 488 EKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEG-EVERLLGINMDMTEVKQL 546 + + Q S + +R+ DG R+L EG +R +GI D+T+ + Sbjct: 141 LQALALDQQYDS-YDNVYRLRHADGTYRWFHSRGRLLRDEGGRPQRFIGIASDITQQRAN 199 Query: 547 NEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHI 606 +E+L Q D+ E V+ D +I +NP +++G++ EE LG H Sbjct: 200 DESLRQAA----AVFDATQEGVLVTDPEQRIVHVNPAFSRITGYSAEEVLGQ------HP 249 Query: 607 TFGDNG----PLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSV 662 T +G ++++ A +R A +V +SG Y I + G V Sbjct: 250 TLLKSGRHDAAFYQSLWQALHNRDAWSGEVWNRRKSGEIYPQWQCIRVIHDEHGRISHYV 309 Query: 663 LVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLD 722 V D+T ++ R+L Y A HD L++L NR F +++ L+ S R A++ IDLD Sbjct: 310 AVFSDITALKRSQRELDYLAHHDPLSNLPNRLLFTERIAHALERSKSEQLRGAVLLIDLD 369 Query: 723 RFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARFIA 781 FK +N+S GH GD LL+ + + L LARLGGDEFGLL C + A +A Sbjct: 370 HFKHINESLGHNVGDLLLKSVGERLQQDLPGGCTLARLGGDEFGLLSETCADAPQAAELA 429 Query: 782 TRIISAVN-----DYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGG 836 ++ + D H ++ +GAS GI+L D+ +V+ AD A + +K+ G Sbjct: 430 QNLLRCLEAPFRLDEHELY------IGASIGISLFPDDADSVEQVLRNADSALFKAKSSG 483 Query: 837 RGRVTVYEPQQAAAHSERAAM------SLDEQWRMIKENQLMMLAHGVASPRIPEARNLW 890 R Y + +R + +LD + L L +G +P EA W Sbjct: 484 REGYAFYVQELTDYARQRVELASSLRHALDNHELRVFYQPLHDLENG--NPVGMEALVRW 541 Query: 891 LISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAK--AVASKGISISLP 948 + +I F D + +D V + Q + A S +++ Sbjct: 542 QHPQR------GLIPPAEFIPIAEDNGMIGPIDAWVLEQACGQMMRWNAEGSALRFVAVN 595 Query: 949 LSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIV 1004 +S S L + + L + L P+ L L + AI++ ++ + +LR G R+ Sbjct: 596 VSSRLFSRGELDLKVAQVLAETGLSPQQLELEVTESAIMEDPDAALSLLTRLRALGVRLA 655 Query: 1005 LSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGP 1064 + G LK D L LD + ++ D + + LG+ +A Sbjct: 656 IDDFGTGYSSLARLKRLPVDKLKLDQSFVRGLPDDIEDAAIARAVIALGHSLGLNVLAEG 715 Query: 1065 VVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 + P +D L +G D YG+ +P + N Sbjct: 716 IESPAQVDFLRALGCD--YGQGYHFGRPAPVTAN 747 >UniRef50_Q0EXC8 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EXC8_9PROT Length = 615 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 141/530 (26%), Positives = 264/530 (49%), Gaps = 26/530 (4%) Query: 323 QWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVE-KLISGEINTYS---MEK 378 ++L N+ C+ LGYS+EEL L D++ + +V K I E+N S + Sbjct: 94 RFLDVNETECRELGYSREELLSLHIF------DIDPEFSEVAAKHIEEELNQVSGVRFDS 147 Query: 379 RYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTE-QVNQQLMERITLANEA 437 + ++G ++ V+ TD L+ IA+ + +L +E Q+N++ R+ LA + Sbjct: 148 VHRRKDGSTFPVEVSAKQVK-TDRPYLFCIARDISVRKLLESERQINEK---RLLLAIQC 203 Query: 438 GGIGIWEWELKPNIFSWDKRMFELYEIPPHIKP-NWQVWYECVLPEDRQHAEKVIRDSLQ 496 G +G+WE +L + + + ++ +++++ E VLPEDR ++ +++ Sbjct: 204 GQMGVWELDLVDHTANTSLELGHIFGYTSQESEWSFKLFLEHVLPEDRSEVSRLFHEAIA 263 Query: 497 SRSPFKLEFRITVKDG-IRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKE 555 ++ + E RI DG +R I + EG V+R++GI D+TE K +A+ + Sbjct: 264 RQTDWHCECRIRRTDGELRWITVRGRHWHDSEGVVQRMIGIVQDITERKLAVQAVIASER 323 Query: 556 RLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLM 615 R ++S+ + V +D + + +P + G+ E +G L ++ + + Sbjct: 324 RFRNLVESLSDWVWEVDEQGRYIYCSPNVRDLLGYEPAELIGKSPLELM--PAAEAARVA 381 Query: 616 ENIYSADTSRSAIEQ--DVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRK 673 E +A + RS ++ ++ LH + G + S P+ DG+ G + +D+T+ ++ Sbjct: 382 EIFGTALSERSHLKDLVNINLH-KDGHEVVMETSGAPVVDADGTFRGYRGIDRDITDRKE 440 Query: 674 MLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGH 733 + R+L A D LT L NR F + + L + +L+ +D+D FK NDS GH Sbjct: 441 LERELESQARTDVLTGLNNRRYFFELAELELARAKRHGNQFSLLMLDVDHFKLFNDSYGH 500 Query: 734 AAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHF 793 GD +L++L+ + + LR D+ R+GG+EF ++LP+ + A +A R+ A+ Sbjct: 501 HIGDRVLQKLSEVCMHTLREIDLSGRIGGEEFAIMLPETRGDRAMEVAERLRLAIAGAPV 560 Query: 794 IWEGR---VHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRV 840 + E + VH S G+T + Q +++ +AD A YA+KN GR +V Sbjct: 561 LLEQQSTFVH-FTVSIGVTSLVAAGRQVDDLLKRADDALYAAKNAGRNQV 609 >UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Bacteria RepID=B1XZA8_LEPCP Length = 1147 Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 171/638 (26%), Positives = 280/638 (43%), Gaps = 32/638 (5%) Query: 408 IAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPH 467 +A DI + Q+ + LA + G G+W+W+L + S+ L P + Sbjct: 447 LAIARDITAERDARAALQRSEASLRLAVDGSGDGLWDWDLITDKISFGAAYARLLRYPGN 506 Query: 468 IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIR---HIRALANRVL 524 + E + P+DR + +R+S++ +PF +R+ DG R + +R Sbjct: 507 DLARDFRFRERLHPDDRDRSIAAVRNSIEYGTPFVATYRMRCFDGEYRWFQGRGMCHR-- 564 Query: 525 NKEGEVERLLGINMDMTEVKQLNEALFQEKERLHIT---LDSIGEAVVCIDMAMKITFMN 581 + G +R G+ D+T+ Q +ERL + DS E V+ D +I +N Sbjct: 565 DAHGTPQRFSGVLTDLTD-------RLQAEERLRLAAQVFDSTQEGVMITDARRRIVSVN 617 Query: 582 PVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGS 641 + G+T+ E LG T ++ G + A + + Q + + GS Sbjct: 618 RAFTTLLGYTETEVLGQ---TPRMLSSGRHDRDFYEAMQAQLDHTGLWQGEIWNRHKDGS 674 Query: 642 -YDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQL 700 SI+ + G V V D+T ++ +L + A HD LTHL NR F +L Sbjct: 675 PVPELLSISAVRDPHGQVTHYVGVFTDITHLKESEARLEFLAHHDPLTHLPNRLLFNNRL 734 Query: 701 RILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARL 760 L +R A++ +DLDRFK +NDS GH AGD LL+ +A + LR SD LARL Sbjct: 735 DQALHQAEREGRRLAVLLLDLDRFKDINDSYGHLAGDELLKYVAQRLTQRLRQSDTLARL 794 Query: 761 GGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAA 819 GGDEF LL+ D + + A +A+ ++S +++ EG VG S GI + D+ Sbjct: 795 GGDEFALLMHDLRHDDDAARLASELLSGLSEPWRSSEGVEVSVGVSIGICIYPDHGRTPQ 854 Query: 820 EVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVA 879 ++ AD A Y +K GRG Y + ER + + R + + QL++ H Sbjct: 855 TLLQGADAALYRAKGDGRGVYRYYADEMTRIARERLHIEARLR-RALADGQLLL--HYQP 911 Query: 880 SPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV 938 + R + +L W E +I F L + V E +Q A+A Sbjct: 912 QVDLRSGRIIGAEALVRWQDPEQGLIPPVRFIPVAEATGLIGEIGAWVLGEACRQ-ARAW 970 Query: 939 ASKG---ISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH-AES-- 992 G +++++ +S A L +++ L + LPP L L + A+++ AE+ Sbjct: 971 LDAGLPALTVAVNVSPRQFHQADLATQVMQVLVETGLPPTHLELELTEGALMEREAEALQ 1030 Query: 993 -VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLD 1029 +Q+LR G + + G SLK D L +D Sbjct: 1031 VLQRLRGLGVGVAIDDFGTGYSSLASLKRFPIDVLKID 1068 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 4/154 (2%) Query: 270 WLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAI--GMALVGTEGQWLQT 327 W + LL A++ ++ RA R + H R A + G++L +G+ + Sbjct: 28 WFTAIQTLLCASLAGWLIR--RAARAQEQAEQAHKRVADVVADAAVGISLTALDGRLTEV 85 Query: 328 NKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDV 387 N+ + +G + EE + L FQ +T P+DL DL +V L++G I+ Y MEKRY + Sbjct: 86 NRRFAEIVGRTVEETQRLRFQDITHPDDLAADLDKVADLLAGRIDRYRMEKRYLRPDSST 145 Query: 388 VWALLAVSLVRHTDGTPLYFIAQIEDINELKRTE 421 +W L VSL R DG P FI+ ++DI +K+ E Sbjct: 146 IWVTLTVSLARGADGQPRQFISVVQDITAVKQAE 179 Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust. Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 14/161 (8%) Query: 527 EGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEK 586 +G+ + + + D+T VKQ L +++ +L + SI + V D+ + NP AE+ Sbjct: 159 DGQPRQFISVVQDITAVKQAEGDLLRQRRQLQQIIQSIPDCVAVRDLDGRYLLANPAAER 218 Query: 587 MSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLH------CRSGG 640 + G ++ E G L + P E + R A+ Q+ ++ G Sbjct: 219 LIGLSEAEICGRTLEQIY--------PEPEAGQARRADRLALSQNGLVRREASYTAADGS 270 Query: 641 SYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYS 681 V +I+PL +DG G + V +DV+ R LR L + Sbjct: 271 VATVDLAISPLLGIDGRATGIISVGRDVSRERHNLRLLEQA 311 >UniRef50_A6CIZ8 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Bacillus sp. SG-1 RepID=A6CIZ8_9BACI Length = 988 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 164/685 (23%), Positives = 313/685 (45%), Gaps = 42/685 (6%) Query: 375 SMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQ--IEDINELKRTEQVNQQLMERIT 432 S ++ N+ G+ + + ++ + G FI I DI+ L ++ + L R+ Sbjct: 100 SFTTQFINKEGNTFESHVKLTPTKFGKGD---FIISGVITDISALAIQKEHAESLEIRLN 156 Query: 433 LANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIR 492 A + IG WE+++ + S + +E+ +P I P +Q+ E PED+ Sbjct: 157 TAQQLADIGTWEYDIANDECSLSYKSYEMLGMPYGITPTFQMLLETAHPEDKDIFLNEFV 216 Query: 493 DSLQSRSPFKLEFRITVKDGIRHIRA-LANRVLNKEGEVERLLGINMDMTEVKQLNEALF 551 +L + F + RI DG I A +L+ + + +G D+TE K + + L Sbjct: 217 SALNEKRNFHCQNRIIRSDGAERILAHFGEVILDDNQKPVKYIGTTYDITEQKIIEDKLA 276 Query: 552 QEKERLHITLDSIGEAVVCIDMAM-KITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGD 610 + + ++ +S+ + +D+ + F++ E + G++ E+ LL + + + Sbjct: 277 ETERQVLKISNSLDVGIWSMDVKKNQYIFVSKGFETICGYSAED-FKQGLLQWEDLIYCE 335 Query: 611 NGPLMENIYSA-DTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVT 669 + L E A T + +Q ++H + IT +T G + ++ D+T Sbjct: 336 DLHLFEQRKEALHTGKVPKQQYRIVHKNGNTKWVQDELITTFNT-KGDLVRIEGILSDIT 394 Query: 670 ESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVND 729 E ++ +++Y A HD LT L NR FE++L+ ++ +Q +++ID+D FK VND Sbjct: 395 EQKEAEEKVNYIAHHDYLTDLPNRRKFEQELQKFIEQSKMANQEFGVMYIDMDGFKRVND 454 Query: 730 SAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN-VESARFIATRIISAV 788 + GHA GD LL E+++ +L + +D +AR+GGDEF +L+ + +E + IA +I++A+ Sbjct: 455 TLGHAIGDKLLVEISTRLLDCVPQNDFVARIGGDEFSVLIDKMHSLEQSTTIAKKIVAAL 514 Query: 789 NDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQA 848 + + G V AS G+ + H A ++ +AD A Y +K G+ +Y + Sbjct: 515 -EVPYKIHGYELFVTASVGVAAYPQDGHDAQTILQKADKALYRAKEMGKNNYQIY---NS 570 Query: 849 AAHSERAAM-SLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDE- 906 + + E + SL+ R +N+ + + P++ + KL E I E Sbjct: 571 SMNIEAYKLYSLENDLRRAVKNKELYFHY---QPKVDAQ------TEKLVGAEALIRWEH 621 Query: 907 ----QTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS---KGISISLPLSVAGLSSATL 959 Q F A + L +V FQ + + + + + +P+S+ + Sbjct: 622 PEWGQVSPAEFIPLAEENDLIFKVTSWTFQTICTQIKNWTDRNLPL-VPISINVSPKIFI 680 Query: 960 VNDLLEQL----ENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRD 1011 N+ E+L NS + PRL+ L I +A++ + ES ++KL+ G +I L G Sbjct: 681 KNEWQEELIYIINNSNVDPRLIELEITEQALIKNEESFSAGIEKLKQLGVKISLDDFGTG 740 Query: 1012 LQIFNSLKANMADYLLLDGELCANV 1036 LK D + +D ++ Sbjct: 741 YSSLLYLKKFKLDTVKIDKSFVDDI 765 >UniRef50_C9PLR8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PLR8_VIBFU Length = 1097 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 178/790 (22%), Positives = 340/790 (43%), Gaps = 62/790 (7%) Query: 314 GMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINT 373 G+ + +G+ + N+A GYS EE++G +L ED + + + + N Sbjct: 299 GVVITDVKGRVIWINEAFSFLTGYSIEEMQGKKPGELLQGEDTDPATVAIMRDALAQQNG 358 Query: 374 YSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITL 433 ++++ Y++ + W +A + + G+ +IA DI + K+ E++ + + Sbjct: 359 FNVDVVNYSKAQNSYWVRIACNPLFSESGSLSGYIAIETDITKEKQDEELIRNSQNLLKA 418 Query: 434 ANEAGGIGIWEWELKPNIFSWDKRMFEL--YEIPPHIKPNWQVWYECVLPEDRQHAEKVI 491 +A IG W + ++ + + L Y + + N W P+D + ++ Sbjct: 419 VIDANNIGTWHFNIQTGELIINDKWAALLGYTLSELLPANRYTWERLTHPDDLAYCTTIL 478 Query: 492 RDSLQSRSP-FKLEFRITVKDG----IRHIRALANRVLNKEGEVERLLGINMDMTEVKQL 546 + P ++ R+ K+G I +++R +G+ LLG + D+ + Sbjct: 479 EKHVSGLIPIYEANLRMKHKNGEWIWINTRGRISSRTY--DGKALWLLGTHFDINDQIIA 536 Query: 547 NEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVL-- 604 +AL + ++ ++ + + ++ ID KI N A+++ G+T++E LG + ++ Sbjct: 537 EKALSDKSRQMEAVVEGLLDGIITIDGRGKILTFNQAAQEIFGYTEDETLGKNISMLMGS 596 Query: 605 -----HITFGDNGPLMENIYSADTSR----SAIEQDVVLHCRSGGSYDVHYSITPLSTLD 655 H ++ N +E S T R A+ +D G + + I + Sbjct: 597 PHREHHDSYLSN--YIERGVSEITGRIRELEALRKD-------GSMFPIELGIVEVQM-- 645 Query: 656 GSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHA 715 + + V++D+TE ++ ++ A +D LT L NR +L + T A Sbjct: 646 AGEVNFIGVVRDITERKQRENEIHQLAFYDPLTLLPNRRLLLDRLTEAINHSVRTRNFSA 705 Query: 716 LVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE 775 L F+DLD FK +NDSAGH GD LL ++A +++ +R D +ARLGGDEF ++ D + E Sbjct: 706 LFFLDLDNFKNLNDSAGHNKGDLLLGQVAERLVNSVRQGDTVARLGGDEFVIIASDLSHE 765 Query: 776 ------SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIAC 829 A +A +I+S + + +G + AS G+TL + N +++ QAD+A Sbjct: 766 PTLAANQAERLAQKIVSNLT-REYNLDGLTYNSSASIGVTLFNSENLPKEDLLKQADMAM 824 Query: 830 YASKNGGRGRVTVYEPQQAAAHSERAAMSLD-------EQWRMIKENQLMMLAHGVASPR 882 Y +K GR V ++PQ + S RA++ D +Q+ + + Q+ L + Sbjct: 825 YKAKYAGRNGVQFFDPQMQVSVSSRASIVSDLYSAIQSQQFVLFYQKQVNHLKQCIGVE- 883 Query: 883 IPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAK---AVA 939 + L+ E ++ F + L + V E AK Sbjct: 884 ---------VLLRWIHPEKGMVSPLQFIPLAEETGLIVPIGEWVLEEACATLAKWSLESE 934 Query: 940 SKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIP----AEAILDHAESVQK 995 + +SI++ +SV S V +L L+ S P+LL L I A I D +++ Sbjct: 935 KQHLSIAVNISVVQFSKDNFVQTVLNALKTSGANPQLLKLEITETLLANNIPDVKAKMKE 994 Query: 996 LRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQR 1055 L+ G + G + LK + L +D ++ + D + + A Sbjct: 995 LQQHGVTFSIDDFGTGYSSLSYLKQLPINQLKIDQGFVRDIINSSNDRAIAQAVITLADS 1054 Query: 1056 LGMKTIAGPV 1065 + ++ IA V Sbjct: 1055 IELQVIAEGV 1064 >UniRef50_Q3SME1 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SME1_THIDA Length = 928 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 181/649 (27%), Positives = 290/649 (44%), Gaps = 55/649 (8%) Query: 477 ECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG------------------IRHIRA 518 + + P+DR AE +R +L+ S RI KDG + IRA Sbjct: 274 DIIHPDDRGAAEVQLRLALRGTSGQGYAMRICRKDGGHFWVAVNWQPIHDASGVYQGIRA 333 Query: 519 LANRVLN-KEGEVERLLGIN-MDMTEVKQLN--EALFQEKERLHITLDSIGEAVVCIDMA 574 + + + K E L I + E Q E QE+ RL L ++ ++ + Sbjct: 334 SLHSIDDLKATEANLRLAIKELRTAETLQRTYLEETEQERARLVSLLSAMNLGILFVAPD 393 Query: 575 MKITFMNPVAEKMSGW---TQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQD 631 ++ + NPV +M W E +G+P+ VL + L E + + R+ +E Sbjct: 394 GRVIYHNPVFGRM--WMIDDSAELIGLPVHEVLTRS---AATLAEPDHFSRHLRAVLETH 448 Query: 632 VVLHCRSGGSYDVHYS----IT----PLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSAS 683 S SY++ + IT P+ +G IG + + +DVT R+ +L Y A Sbjct: 449 -----ESSESYEIQMTDGRVITELDYPVRDREGRFIGHLWIYEDVTRERQTAERLVYLAE 503 Query: 684 HDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLREL 743 DALT L NR F+++L + + + A++F DLD FK +NDS GH AGDALL + Sbjct: 504 RDALTGLYNRHRFQQELARTMLDSDRQKMQCAVMFFDLDEFKTINDSYGHRAGDALLIRV 563 Query: 744 ASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVG 803 A + +++R ++VLARLGGDEF +LLP A +A R++ A+ F +EG+ RV Sbjct: 564 AGEISALVRRNEVLARLGGDEFAILLPALQDNEAEALADRVVHAIAQIPFRFEGQSLRVT 623 Query: 804 ASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQW 863 S GI + A +++++ADIA Y +K+ G+ V+ AA R +S E+ Sbjct: 624 TSVGIAYYPAHAVDADDLVARADIAMYQAKDAGKNTWRVFRADSAADSEMRTRLSWGERI 683 Query: 864 RMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCE---GEIIDEQTFRRSFSDPALSH 920 + L L H R + L +L + E ++I F + Sbjct: 684 SNALDKGLFQL-HFQGVYRADDGALSHLEALVRMTDEHRPDQLIMPVHFIQRAEKSGRIL 742 Query: 921 ALDRRVFHEFFQQAAKAVASKGI-SISLPLSVAGLSSATLVNDLLEQLENSPL-PPRLLH 978 +DR V HE Q A A+ I SI++ LS LS +L + L + + P RL+ Sbjct: 743 DIDRWVVHETIQLLA---ANPCIPSIAVNLSGRSLSEPSLPQTIGNGLREAGVNPSRLIF 799 Query: 979 LIIPAEAILDHAES---VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCAN 1035 I A+ D ++ ++ LR GC + L G F LK D + +DG + Sbjct: 800 EITETAAVADLQDAQRMIEALRQLGCGVCLDDFGVGFASFAYLKHLDVDTIKIDGIFIRD 859 Query: 1036 VQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYG 1084 + + +++ + + A LG +A V + L GVDL+ G Sbjct: 860 LPNDPDNQVFVQAMVSVALGLGKSVVAEYVEDGATLALLRQFGVDLVQG 908 >UniRef50_Q67NQ9 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67NQ9_SYMTH Length = 720 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 155/575 (26%), Positives = 257/575 (44%), Gaps = 33/575 (5%) Query: 533 LLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQ 592 L + D+TE K+ L + +ER + + V +D I +N M G+ Sbjct: 154 FLAVVQDLTERKETERRLKESEERFRLAFEHAPIGVALLDAGGAILEVNRALCAMLGYAP 213 Query: 593 EEALGVPL--LTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITP 650 E G PL L F D L + +V L R G + S Sbjct: 214 AELAGRPLTDLAAHPGAFPDPAHLQS---------AGPAPEVALRHRDGRTIWAQLSCAA 264 Query: 651 LSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNST 710 L+ S+ +L +QD+T+ ++ +L A D+LT LANR F+++L + T Sbjct: 265 LNGWQ-SDTAFILQLQDITDRKRYEEELVRLAMVDSLTDLANRRRFQQELEEAVTEAERT 323 Query: 711 HQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLP 770 + ALVFIDLD FK +ND+ GH AGD +LR++A+++ S +R D ARLGGDEF L+L Sbjct: 324 GRSGALVFIDLDMFKHINDTLGHPAGDEVLRQVATILRSAIRPGDTAARLGGDEFALVLR 383 Query: 771 DCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACY 830 + + A +A R+++A+ F + AS G+ L ++ E+M++AD+A Sbjct: 384 NADGARAAQVADRLLTAIRRARFGGAEAPVSLTASMGVVLFPEHGRSVRELMNRADMALL 443 Query: 831 ASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQ-WRMIKENQLMMLAHGVASPRIPEARNL 889 +K GGR + P+ +A + ++ R ++E++ ++ + R RN Sbjct: 444 EAKEGGRDSWAPFTPEGRWQREMQAQLLWRQRISRALEEDRFVLHYQPILDLR----RNA 499 Query: 890 WLIS---LKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISIS 946 L++ GE+I F L +DR V ++ A+ + G Sbjct: 500 VTRHEALLRMVGDGGELIFPGEFMAVAERFDLIQQVDRWVLERAVRELAE-LQRAGRRTV 558 Query: 947 LPLSVAGLSSATLVNDLLEQLENSPL------PPRLLHLIIPAEAI--LDHAES-VQKLR 997 L ++ LS TL++ +L + L P L+ I AI +D AE + +++ Sbjct: 559 LEVN---LSGRTLMDPVLPAVIRRGLTLRDVDPASLVLEITETAAISDVDQAERFIGEMK 615 Query: 998 LAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLG 1057 GCR+ L VG LK DY+ +DG N+ + D+ L+ + + LG Sbjct: 616 ALGCRLALDDVGAGFASLYFLKRLPVDYIKIDGAFIRNLPHDTADQHLVRALASVCRELG 675 Query: 1058 MKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQP 1092 +T+A V P + + G+D G +I P Sbjct: 676 KQTVAEFVDSPKTLQVVREYGIDYAQGYLIGRPGP 710 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 11/130 (8%) Query: 295 KHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPE 354 + + ESE FR A E++ IG+AL+ G L+ N+ALC LGY+ EL G L Sbjct: 169 RRLKESEERFRLAFEHAPIGVALLDAGGAILEVNRALCAMLGYAPAELAGRPLTDLAAHP 228 Query: 355 DLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVR--HTDGTPLYFIAQIE 412 D ++ +G ++ +R+G +WA L+ + + +D FI Q++ Sbjct: 229 GAFPDPAHLQS--AGPAPEVALR----HRDGRTIWAQLSCAALNGWQSDTA---FILQLQ 279 Query: 413 DINELKRTEQ 422 DI + KR E+ Sbjct: 280 DITDRKRYEE 289 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 6/153 (3%) Query: 294 RKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWP 353 ++ ++ SE +E + V + + + N Q GY++EE+ G L P Sbjct: 39 QRALARSEARLAGMLEITPAATVAVDADQRIVLFNDMAEQVFGYTREEVLGRPLDVLLPP 98 Query: 354 EDLNKDLQQVEKLISGEINTYSMEKRY----YNRNGDVVWALLAVSLVRHTDGTPLYFIA 409 E + Q V + G + M +R ++G++ A +A++ V D T F+A Sbjct: 99 ETAARHRQHVTRFGLGPVRQRRMAERQELTARRKSGELFPAQIAIARVAMDDET--LFLA 156 Query: 410 QIEDINELKRTEQVNQQLMERITLANEAGGIGI 442 ++D+ E K TE+ ++ ER LA E IG+ Sbjct: 157 VVQDLTERKETERRLKESEERFRLAFEHAPIGV 189 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 19/146 (13%) Query: 546 LNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVL- 604 + AL + + RL L+ A V +D +I N +AE++ G+T+EE LG PL +L Sbjct: 38 VQRALARSEARLAGMLEITPAATVAVDADQRIVLFNDMAEQVFGYTREEVLGRPLDVLLP 97 Query: 605 ---------HITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLD 655 H+T GP+ + R A Q++ +SG + +I ++ D Sbjct: 98 PETAARHRQHVTRFGLGPVRQR-------RMAERQELTARRKSGELFPAQIAIARVAMDD 150 Query: 656 GSNIGSVLVIQDVTESRKMLRQLSYS 681 + + V+QD+TE ++ R+L S Sbjct: 151 ETLF--LAVVQDLTERKETERRLKES 174 >UniRef50_D1CEK7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Bacteria RepID=D1CEK7_THET1 Length = 1785 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 158/594 (26%), Positives = 271/594 (45%), Gaps = 28/594 (4%) Query: 501 FKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHIT 560 + LE RI D I +++++N I E ++ + L + + R Sbjct: 1188 YSLEPRIFSPDDINFLQSVSN--------------ILAAAIEYRRAAQDLMRAEARYRKL 1233 Query: 561 LDSIGEAVVCIDMAMK--ITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENI 618 ++ I +M M+ +++++P E M G+T EE P I D + ++ Sbjct: 1234 VEQIPAVTYIEEMGMRGVVSYISPQVEDMLGYTPEEWTSNPDPWSRIIHPDDYEDVATSM 1293 Query: 619 YSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQL 678 A+ ++ + +SG V + +G + V+ ++T+ +K+ +L Sbjct: 1294 EKAEELGIPFRKEYRMISKSGEIVWVRDEAVIVRDAEGQPLFWQGVLVNITDKKKLEDKL 1353 Query: 679 SYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDA 738 +Y A HDALT L NRA F +L+ L + A++F+DLDRFK VNDS GH GD Sbjct: 1354 AYQAFHDALTGLPNRALFMDRLKGALARAKRYNSCCAVLFLDLDRFKHVNDSLGHQYGDQ 1413 Query: 739 LLRELASLMLSMLRSSDVLARLGGDEFGLLL-PDCNVESARFIATRIISAVNDYHFIWEG 797 LL E+ + +LS++RS+D +AR GGDEF +LL P C +E A+ +A R+I + + F+ G Sbjct: 1414 LLIEVGNRLLSVVRSADTVARRGGDEFTILLEPICELEYAKQVAERVIKEL-EKPFLING 1472 Query: 798 RVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAM 857 + + S GI L ++ + A E++ AD+A Y +K+ GR R VY+ + E+ + Sbjct: 1473 QELYISTSIGIALSNEYS-DAEELIHNADVAMYWAKSRGRARYEVYDLSMSTFTLEKLKL 1531 Query: 858 SLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPA 917 E R ++ + ++ V R E L + L+ E ++ F + D Sbjct: 1532 E-SELRRAVQREEFSLVYQPVVRLRDKEVVALEAL-LRWHHPERGLLLPDQFLKELEDTG 1589 Query: 918 LSHALDRRVFHEFFQQAA---KAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPP 974 L L + E +Q K VA + +S+ + AT++ DL L++ + P Sbjct: 1590 LIMPLTDWMLREVCRQHKEWQKRVAGELPLVSVNFTARQFQKATMLEDLASILQDMDVSP 1649 Query: 975 RLLHLIIPAEAILDHAESVQK----LRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDG 1030 L L I +D A S + L+ G ++ L VG + L+ D L +D Sbjct: 1650 SCLQLEITETVAMDDAASTARTMKGLKDLGVKLALDDVGTGYSSLSYLRKFPLDVLKVDR 1709 Query: 1031 ELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYG 1084 + + ++ + A+ LGM A V + +D LS +G DL G Sbjct: 1710 TFVMGLGVDPDSTAIVHALVMLAKSLGMLVTAEGVEKQVQVDALSTLGCDLAQG 1763 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 65/259 (25%), Positives = 132/259 (50%), Gaps = 5/259 (1%) Query: 295 KHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPE 354 K + ESE F+ E SAIGMAL+ EG+ L+TNKAL + LGY+Q +L F +L P+ Sbjct: 634 KALRESEERFKAIFEDSAIGMALIDQEGRILKTNKALTKILGYTQNDLIEKNFLELVHPD 693 Query: 355 DLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDI 414 + + ++ SG+ Y +E+RY +++G +W L VS +R G + +EDI Sbjct: 694 HESTLRGRFTRIFSGKNTHYHVEQRYIHKDGHEIWGNLTVSAIRSHSGDVDLAVCMLEDI 753 Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQV 474 K Q + +++ + L ++ + + +++ + W+ +L+ P +V Sbjct: 754 TSRK---QADSRILFQARLLDQV-PVAVIACDMQMRVVHWNSAASDLFGYTPQEAIGKEV 809 Query: 475 WYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLL 534 + + ++ +VI+ L+ S ++ E ++D + + + V +K + L+ Sbjct: 810 FELASTIDKSENIREVIQVVLREGS-WRGEVDFPLEDRVVPAQVEISAVRDKRRMLVGLV 868 Query: 535 GINMDMTEVKQLNEALFQE 553 + +D+++ K++ E L ++ Sbjct: 869 AVIVDLSDQKKVEERLRRQ 887 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 58/272 (21%), Positives = 122/272 (44%), Gaps = 16/272 (5%) Query: 417 LKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWD---KRMFELYEIPPHIKPNWQ 473 L+++E+ NQ L+ R T N+A IW+W+L N W+ +R+F YE + + + Sbjct: 506 LRKSEERNQ-LISRAT--NDA----IWDWDLSTNRIIWNDAIQRLFG-YEADHEFETSIE 557 Query: 474 VWYECVLPEDRQHAEKVIRDSLQSRSP-FKLEFRITVKDG-IRHIRALANRVLNKEGEVE 531 W E P+D + + + ++ S + + E+R DG ++ V + G+ Sbjct: 558 WWEERCHPDDIERLRESLYGAINSDADVWAEEYRFRKADGSYAYVLDRGYIVRDASGKAI 617 Query: 532 RLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWT 591 R +G +D+T + +AL + +ER + + ID +I N K+ G+T Sbjct: 618 RAVGSMLDITHRIEAAKALRESEERFKAIFEDSAIGMALIDQEGRILKTNKALTKILGYT 677 Query: 592 QEEALGVPLLTVLHITFGDN-GPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITP 650 Q + + L ++H I+S + +EQ + + G + +++ Sbjct: 678 QNDLIEKNFLELVHPDHESTLRGRFTRIFSGKNTHYHVEQRYI--HKDGHEIWGNLTVSA 735 Query: 651 LSTLDGSNIGSVLVIQDVTESRKMLRQLSYSA 682 + + G +V +++D+T ++ ++ + A Sbjct: 736 IRSHSGDVDLAVCMLEDITSRKQADSRILFQA 767 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 60/278 (21%), Positives = 118/278 (42%), Gaps = 16/278 (5%) Query: 328 NKALCQFLGYSQE---ELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRN 384 N A+ + GY + E +++ P+D+ + + + I+ + + ++ E R+ + Sbjct: 537 NDAIQRLFGYEADHEFETSIEWWEERCHPDDIERLRESLYGAINSDADVWAEEYRFRKAD 596 Query: 385 GDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWE 444 G + L +VR G + + + DI + ++ ER E IG+ Sbjct: 597 GSYAYVLDRGYIVRDASGKAIRAVGSMLDITHRIEAAKALRESEERFKAIFEDSAIGMAL 656 Query: 445 WELKPNIFSWDKRMFEL--YEIPPHIKPNWQVWYECVLPEDRQHAE-KVIRDSLQSRSPF 501 + + I +K + ++ Y I+ N+ E V P+ + R + + Sbjct: 657 IDQEGRILKTNKALTKILGYTQNDLIEKNF---LELVHPDHESTLRGRFTRIFSGKNTHY 713 Query: 502 KLEFRITVKDGIRHIRALA-NRVLNKEGEVERLLGINMDMTEVKQLNEA-LFQEKERLHI 559 +E R KDG L + + + G+V+ + + D+T KQ + LFQ + Sbjct: 714 HVEQRYIHKDGHEIWGNLTVSAIRSHSGDVDLAVCMLEDITSRKQADSRILFQAR----- 768 Query: 560 TLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALG 597 LD + AV+ DM M++ N A + G+T +EA+G Sbjct: 769 LLDQVPVAVIACDMQMRVVHWNSAASDLFGYTPQEAIG 806 >UniRef50_Q0A7L2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A7L2_ALHEH Length = 316 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 101/278 (36%), Positives = 149/278 (53%), Gaps = 3/278 (1%) Query: 561 LDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYS 620 L+++ EAVV + +I ++NP A +++GW A G PL VLH+ PL Sbjct: 10 LEALPEAVVWVRPDGRIGYLNPRASQLTGWPVANARGQPLGAVLHLE-EQGQPLPPEALV 68 Query: 621 ADTSR--SAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQL 678 A + A E+ L + G + +V + P+ G G +L +D+ + KM R+L Sbjct: 69 AQCRQLGQAGERHARLRRQDGETLEVALTGAPIQDGAGQPRGVILSFRDIGDYLKMARRL 128 Query: 679 SYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDA 738 +Y ASHD LT L NR ++L ++ + HAL ++DLDRFK +ND AGH AGD Sbjct: 129 TYEASHDGLTGLVNRREALRRLERMVASAGEQCCEHALCYLDLDRFKGINDLAGHVAGDR 188 Query: 739 LLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGR 798 L E+A +L +R D +ARLGGDEF +LL C + A +A I +AV DY F W G+ Sbjct: 189 ALAEVAGRLLDCVRQRDTVARLGGDEFLVLLEHCPLLQAIRVAQVIRAAVRDYRFHWRGQ 248 Query: 799 VHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGG 836 +G S G+ + + A ++ AD ACY +K G Sbjct: 249 TLGLGVSIGLVPVLGHGPGAEALLEVADQACYEAKRSG 286 >UniRef50_Q3A4W5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4W5_PELCD Length = 1274 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 202/838 (24%), Positives = 364/838 (43%), Gaps = 60/838 (7%) Query: 293 ERKHISES----ETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGY--SQEELRGL- 345 ERK ES E +R+ ++++ G+ +G+ + N A+ L Y SQE L + Sbjct: 421 ERKLTEESLQVSEQKYRHIVDHAPFGITRTTRDGKLISANPAMANILKYDSSQELLETIG 480 Query: 346 --TFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGT 403 + Q++ + +++ + +IS +++ R ++G + + + Sbjct: 481 RSSLQEVIFSNPADREDMVDKVIISNSWCLHNLSLRC--KDGSLATCRVHSRRLSEKGSQ 538 Query: 404 PLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFE-LY 462 + +EDI E T+Q Q+ + I E ++E+ L N +++ E ++ Sbjct: 539 NWEYENFLEDITEQLETQQTLQKNKKNIQQLAENTEAVLYEYNLSDNKWTYMAPQVERIF 598 Query: 463 EIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG----IRHIRA 518 P + Q W + V D A + L + +E+R KDG +R I Sbjct: 599 GYKPEDWIDNQFWLDRVHEADWGKASREELSKLNQQEAHSIEYRFYKKDGSIVWVRDIIR 658 Query: 519 LANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKIT 578 + + NK L G+ +D+T+ KQ L ++L ++ +VV D +I Sbjct: 659 IESDAENKLC----LHGLLIDITDSKQSESQL----KKLSRAIEQSPVSVVITDPEGRIE 710 Query: 579 FMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSA--DTSRSAIE--QDVVL 634 ++NP +++G+T EE + + +G L+ ++Y + T S E ++ Sbjct: 711 YVNPKFTQLTGYTLEEVIA------QNPRILKSGNLLPSVYDSLWKTITSGKEWYGELEN 764 Query: 635 HCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRA 694 + G + SI+PL G I + V +D+T+ + ++L Y A+HD LT LANR Sbjct: 765 KRKDGSIFWESASISPLFDESGKIINFIGVKEDITQRKLNEKRLEYMATHDGLTGLANRT 824 Query: 695 SFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSS 754 L I L + + A++ +DLDRFK +NDS GH GD +L+ + + +RS+ Sbjct: 825 LLYDHLEIALHQSQRSKKLVAVILLDLDRFKVINDSLGHLVGDQVLKAVGQRLKQYVRST 884 Query: 755 DVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDD 813 D +ARLGGDEF +LL D + +A IA ++ +N+ F+ GR V AS GI L + Sbjct: 885 DTVARLGGDEFVVLLTDVRDTTAAGKIAHNLLRKLNEPFFL-HGRELYVSASFGICLSET 943 Query: 814 NNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMM 873 +N ++ ADIA Y +K G G +Y + ++ R E Sbjct: 944 DNVDGTILLRNADIAMYKAKAEGCG---LYFYSHEMNEHLIKTLEMENSLRQALEKNEFQ 1000 Query: 874 LAHGVASPRIPEA--RNLWLISLKLWS-CEGEIIDEQTFRRSFSDPALSHALDRRVFHEF 930 L + P++ A R + +L W + +I F + L + V E Sbjct: 1001 LYY---QPKVEHATGRIIGCEALLRWRHPQRGMIPPSEFIPLAEETGLIVQIGHWVLAEA 1057 Query: 931 FQQAAKAVASKGISISLPLSVAGLSSA-------TLVNDLLEQLENSPLPPRLLHLIIPA 983 +Q +K ++G+ PL++A SA L+ + LE S L P L L + Sbjct: 1058 CRQ-SKIWETEGLP---PLTMAVNISARQFYQGENLIQAVKSTLERSQLVPSQLELELTE 1113 Query: 984 EAILDHA----ESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGN 1039 ++ A +++K++ G + L G N L++ D L +D ++ + Sbjct: 1114 SMVMKDAVNAERTMRKIKQLGVSLSLDDFGTGYSSLNYLRSFPVDSLKIDRSFILDIASD 1173 Query: 1040 LMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 ++ I A LG++T+A V + ++ G + I G + + P + V Sbjct: 1174 ASSAAILNSIIAIAHTLGLQTVAEGVENNDQLALVANCGCNYIQGYLFSRPLPPEDFV 1231 >UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STH5_PSYIN Length = 962 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 161/684 (23%), Positives = 295/684 (43%), Gaps = 72/684 (10%) Query: 417 LKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWY 476 ++R E + Q ++ G+G + K I++ + + EL+ I + + W Sbjct: 261 IQRAELIKQTY--KLKRYQRIAGLGSYLLNFKTGIWTSSEILDELFGIDQSYNHSTEGWT 318 Query: 477 ECVLPEDRQHAEKVIRDSLQSR-SPFKLEFRIT--VKDGIRHIRALANRVLNKEGEVERL 533 V P+DR + +++ + ++ PF E+RI IR + L + +G ++ Sbjct: 319 LIVHPDDRIKMDDYLKNEVLAKGKPFDKEYRIVRQTDQSIRWLHGLGKLEFDNDGLPVKM 378 Query: 534 LGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQE 593 +G D+TE K+ +++L +L + ++ ++V D+ KI ++N + K++G++++ Sbjct: 379 VGTVQDITEQKRASDSLL----KLSLAVEQSPNSIVITDLDGKIEYVNNMFIKVTGYSRD 434 Query: 594 EALGV-PLLTVLHITFGDNGPLMENIYS---ADTSRSAIEQDVVLHCRSGGS-YDVHYSI 648 E LG P + +G + + A +R I +++ R S Y +I Sbjct: 435 EVLGQNPRIL-------KSGKTPQTTFKEMWAHLTRGDIWHGEIINRRKDKSIYIESATI 487 Query: 649 TPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVN 708 TP+ DG V + +D+TE +K A D LT L NR + Q++ L Sbjct: 488 TPVKQADGKITNYVAIKEDITEKKKAEAYTENLAYFDQLTGLPNRRMLQAQVKYRLNMAQ 547 Query: 709 STHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLL 768 S HQ ++F+DLD FK +NDS GH GD +L ++A + +R D ++RLGGDEF +L Sbjct: 548 SNHQPLTVMFLDLDNFKNINDSLGHTVGDQVLIKIAKRIKKAIREVDTVSRLGGDEFIML 607 Query: 769 LPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIA 828 P+ + +A IAT +I ++ + + + S GI + ++ + ++ A+ A Sbjct: 608 FPNTDANAAMHIATTLIQEISKASVVEHNEL-TITPSIGIAIYPNDGNDFKTLLKNAETA 666 Query: 829 CYASKNGGRGRVTVYEPQQAAAHS-------------ERAAMSLDEQWRMIKENQLMMLA 875 Y KN R P+ + S +R + L Q ++ N ++ A Sbjct: 667 MYRVKNDSRNGFHFVTPEMQLSASRNLQLENALRHALKRNELQLYYQPQISTSNGQIIGA 726 Query: 876 HGVASPRIPEARNLWLIS----LKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFF 931 + PE L +IS + + G+II+ + L A+ Sbjct: 727 EALLRWHHPE---LGMISPAEFIPIAESSGQIIE-------IGEWVLRTAI--------- 767 Query: 932 QQAAKAVASKGIS---ISLPLSVAGLSSA---TLVNDLLEQLENSPLPPRLLHLIIPAEA 985 + K G + I++ LSV TL+ D+L +++ LP L L + Sbjct: 768 -RQTKNWMDDGFTPMIIAVNLSVVQFRQKNLLTLITDILAEVQ---LPNEYLELELTEAV 823 Query: 986 ILDHAESV----QKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLM 1041 + ESV G R+ + G + LK L +D ++ + Sbjct: 824 TMHDPESVINVMNTFHEQGIRMSIDDFGTGYSSLSYLKKFKVYKLKIDQSFIRDISNDPD 883 Query: 1042 DEMLITIIQGHAQRLGMKTIAGPV 1065 D +++ I A LG++TIA V Sbjct: 884 DRAIVSAIIDMASNLGLQTIAEGV 907 >UniRef50_A1TXX3 Diguanylate cyclase/phosphodiesterase n=2 Tax=Marinobacter RepID=A1TXX3_MARAV Length = 814 Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 185/815 (22%), Positives = 337/815 (41%), Gaps = 75/815 (9%) Query: 318 VGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSME 377 V +G+ +Q ++ GY +L G Q + L S + + ++ Sbjct: 25 VDDDGRIIQADRHAETMFGYDISDLTGQKVQHI---------------LASRQDDPFAPA 69 Query: 378 KRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQV---------NQQLM 428 R+ NG V RH DG +F A + E++ ++Q + + Sbjct: 70 HRHRLDNGQTVLVTF-----RHKDG--FFFTALLGLRMEIRDSDQAATASITLRDSDAMD 122 Query: 429 ERIT-LANEAGGIGIWEWELKPNIFSWDKRMFELYEIP--PHIKPNWQVWYECVLPEDRQ 485 RI LA ++ G G+WE ++ N SW + M+ L E+ + P ++Y C ++R Sbjct: 123 SRIQRLAEQSAGFGLWELDMPSNEISWSEGMYRLLELKAGSELTPEQALFY-CQTGQNRV 181 Query: 486 HAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQ 545 A + R +++ PF ++ I LA R L G V++L G+ ++ +E Sbjct: 182 RA--MFRRCMRTGQPFSMDLTILTSRQRPQRVTLAGRALKNGGRVQKLGGVMVNHSEAMV 239 Query: 546 LNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPL----- 600 + Q ++ L T + + VV ID ++ N + W Q+ L Sbjct: 240 HDLEKQQAQQILQATTAASSDLVVAIDTEFRLLHFN------TPWCQQFQHAFDLTPKTG 293 Query: 601 --LTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGG--SYDVHYSITPLSTLDG 656 L L F + L+E ++ R ++ L+ + G Y+ H+ + G Sbjct: 294 DNLRSLLKDFPNERRLIERLWQRAFDREHFVAEMPLNRQGEGLPIYEFHFQ--SIRGDRG 351 Query: 657 SNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHAL 716 G+V V +D++ + Y HD +T L NR SF + L + + L Sbjct: 352 EVTGAVHVARDISNRIQHTSNSDYRMRHDPVTGLMNRRSFIEHLERAMGHRHKRQSTDGL 411 Query: 717 VFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVES 776 +F+DLD F+ N+ AG D LRELA+++ R D LARL GD F L + +C Sbjct: 412 LFLDLDNFEQFNEDAGSGTCDRYLRELAAMLGLRERQRDALARLAGDTFALFIENCPEPR 471 Query: 777 ARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDN-NHQAAEVMSQADIACYASKNG 835 AR IA I + + F W+G + S G+ ++D +A +++QA C+ +K Sbjct: 472 ARKIAEEIREQIAQFQFEWQGHTLQTTTSGGLLILDSELPERADTLLTQAADLCHTAKTS 531 Query: 836 GRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLK 895 GR R+ AA +++ + + +++L++ + P A W ++ Sbjct: 532 GRNRIHTAHALPDAAGDTGTDKQMEQLRQALDQHRLILEFQALK----PVASVTWGDHIE 587 Query: 896 -LWSCEGEIIDEQTFRRSFSDP-----ALSHALDRRVFHEFFQ--QAAKAVASKGISISL 947 L G+ D+ T P L+ LDR+V + + + + Sbjct: 588 ILCRIPGQEPDDTTLLPGQFLPLAERFDLAKRLDRQVIRQTLDWLGQHRLLEPRLKYCGF 647 Query: 948 PLSVAGLSSATLVNDLLEQ-LENSPLPPRLLHLIIPAEAILDHAESV----QKLRLAGCR 1002 LS+A + T D +EQ L SP L I + + V L GCR Sbjct: 648 NLSLASVLDDTFA-DFMEQLLAPSPFRAECFCLEIREAHATQYPDEVAVLCDALHRIGCR 706 Query: 1003 IVLSQVGRDLQIFNSLKANM-ADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTI 1061 + L G ++ + SL A++ D + LD + +++ + + ++++ + A+ G +T+ Sbjct: 707 VALEGAGASVESY-SLAAHLPVDIIKLDRRVMDHLEDDPVQQVMVDALHRIAEAAGKETV 765 Query: 1062 AGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 A + + + +G+ G ++ PL+ L Sbjct: 766 ATFIESDETLRKVRTLGIHFGQGYRLSKPSPLEQL 800 >UniRef50_A1T0Y1 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1T0Y1_PSYIN Length = 727 Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 153/555 (27%), Positives = 256/555 (46%), Gaps = 32/555 (5%) Query: 554 KERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDN-- 611 K+ + L S E ++ +D KI F NP A+++ + + LG+ HI DN Sbjct: 146 KDHNELLLKSTAEGIISLDPMGKINFANPAAKQLLMYNDDTILGI---DYAHIQGTDNLT 202 Query: 612 GPLMENI--YSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVT 669 P + ++A + R + HC G S+ V ++ +P+ + + G VLV QD++ Sbjct: 203 SPFKDCALHHTALSKRIIHDDQQSFHCFDGSSFPVEFTASPICKTNSESSGIVLVFQDIS 262 Query: 670 ESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVND 729 E +K +QL+ A +D LT L NRA F L + + + AL+F+DLDRFK VND Sbjct: 263 ERKKTEQQLTRLAQYDCLTGLPNRALFTSLLSQAISRSDRRKNKLALLFLDLDRFKQVND 322 Query: 730 SAGHAAGDALLRELAS-LMLSMLRSSDVLARLGGDEFGLLLPDCNVES--ARFIATRIIS 786 S GH GD LL+++A L L+ L V +RLGGDEF ++L + N ES A +A ++I+ Sbjct: 323 SLGHDVGDLLLQQVAQRLQLATLEGGTV-SRLGGDEFMVILEEVNSESHKAAKLAQKMIT 381 Query: 787 AVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVY--E 844 ++ D F GR + S GI L + ++ +AD+A Y +K GR Y E Sbjct: 382 SL-DAPFNILGREVLISTSIGIALCSGSTQCIDSLLKRADMAMYRAKEQGRNNFQFYTAE 440 Query: 845 PQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIP--EARNLWLISLKLWSCEGE 902 QQ A+ S + L+ + R + + L + P++ + + L +L W +G+ Sbjct: 441 LQQQASKS----IELENRLRHALQRKEFFLHY---QPQVDTNSGQIIGLEALLRWQPDGQ 493 Query: 903 -IIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAK----AVASKGISISLPLSVAGLSSA 957 +I + F + L + V E Q + + S + +++ LSV L Sbjct: 494 ALISPEEFIPVAEEAGLIVPIGEWVLREACSQLHRWHRSGLLSPTVKMAVNLSVRQLEHT 553 Query: 958 TLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESV----QKLRLAGCRIVLSQVGRDLQ 1013 +L++ L + L+ + L P L L I A++ + V + G ++ L G Sbjct: 554 SLLSTLTQILQETGLKPSQLELEITETAVMKDPDLVVNILHSIHAMGIQLSLDDFGTGYS 613 Query: 1014 IFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDT 1073 LK L +D ++ G D+ ++ I ++ L + +A V +D Sbjct: 614 SLRYLKLLPLHVLKIDRSFINDIGGKQRDQAILESIIYLSRNLDLTVVAEGVETQEQLDF 673 Query: 1074 LSGIGVDLIYGEVIA 1088 LS I G I+ Sbjct: 674 LSRFNCHSIQGYYIS 688 >UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Betaproteobacteria RepID=C6XEG9_METSD Length = 718 Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 161/641 (25%), Positives = 274/641 (42%), Gaps = 37/641 (5%) Query: 475 WYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLNKEGEVERL 533 + E LPEDR + D+L R F++E+RI DG IR + + N +G+VE L Sbjct: 81 FEELTLPEDRARIRNTVDDALSRRERFEIEYRIMTIDGQIRWVNERGTGIFNPQGQVEAL 140 Query: 534 LGINMDMTEVKQLNEALFQEKERLH--ITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWT 591 G D+T+ ++LNE QE ER + I +SI E + + NP ++ G+ Sbjct: 141 EGFIQDITQ-RKLNEQALQEAERRYRNIFENSI-EGIFQTSQDGQYINANPALARIYGYE 198 Query: 592 QEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSA------IEQDVV-----LHCRSGG 640 E L L + + +Y SR A +E VV ++ R G Sbjct: 199 SPEELIQSL-----------NNIAQQLYVQPESRQAFLTLMQLEDRVVNFESQIYRRDGS 247 Query: 641 SYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQL 700 + + + + G + ++D+TE + + Y A+HD LT L NR + +L Sbjct: 248 TIWISENARAVRNDAGKLLYFEGTVEDITERKSYNALIEYQATHDDLTGLPNRTLMQDRL 307 Query: 701 RILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARL 760 + + T + A+VF+DLD+FK +NDS GH GD LL +A + S +R SD +AR Sbjct: 308 LQAISYADRTASKLAVVFVDLDKFKDINDSMGHFIGDQLLIAMARRLESCIRDSDTVARP 367 Query: 761 GGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAE 820 GGDEF LLL + + A + + A+ EG+ V +S GI+L D+ + Sbjct: 368 GGDEFVLLLSNIHGMDALSQTLQRVLALTSEPCSIEGKDFTVTSSIGISLYPDDGKTSET 427 Query: 821 VMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVAS 880 ++ AD A Y +K G+ Y + + ER M + + N+ + H Sbjct: 428 LLKNADTAMYKAKQEGKNNFQFYTRELNSILVERLEMEY-QMRNALGHNEFHL--HYQPK 484 Query: 881 PRIPEARNLWLISLKLWSCEGE-IIDEQTFRRSFSDPALSHALDRRVFHEFFQQ--AAKA 937 + R + +L W + +I F + +L + V + + A Sbjct: 485 LNLRTQRITGVEALIRWHNPRQGLISPNRFIPIAEESSLIEQIGSWVLEKACMESIALSQ 544 Query: 938 VASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESV 993 ++ + +S+ +S + LV ++ L+ + L P LL L I + D + + + Sbjct: 545 LSGYDVPVSVNVSPRQFQQSNLVGNISRVLQETGLKPSLLELEITEGTLADTSPQFIKVL 604 Query: 994 QKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHA 1053 L+ G ++ + G LK D L +D ++ + ++ ++ I Sbjct: 605 NDLKGLGIKLAIDDFGTGYSSLGYLKHFPIDNLKIDRSFVMGLESDTANQAILKAIVALG 664 Query: 1054 QRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLD 1094 LG+ +A V D L IG D + G + + P D Sbjct: 665 HNLGINLVAEGVETERQRDFLLSIGCDEMQGFLFSQPLPFD 705 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 54/127 (42%), Gaps = 9/127 (7%) Query: 297 ISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEE-----LRGLTFQQLT 351 + E+E +RN E S G+ +GQ++ N AL + GY E L + Q Sbjct: 157 LQEAERRYRNIFENSIEGIFQTSQDGQYINANPALARIYGYESPEELIQSLNNIAQQLYV 216 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 PE Q L+ E + E + Y R+G +W VR+ G LYF + Sbjct: 217 QPESR----QAFLTLMQLEDRVVNFESQIYRRDGSTIWISENARAVRNDAGKLLYFEGTV 272 Query: 412 EDINELK 418 EDI E K Sbjct: 273 EDITERK 279 >UniRef50_C7LQR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=C7LQR9_DESBD Length = 1262 Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 193/732 (26%), Positives = 317/732 (43%), Gaps = 36/732 (4%) Query: 372 NTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERI 431 N + R N + + A++ S R D +FI DI+E KR E ++ E Sbjct: 522 NQVEVTGRRANGSQVTLEAVITQSSGRQGD----FFIGTFRDISERKRYENELRKAEENF 577 Query: 432 TLANEAGGIGIWEWELKPNIFSWDKRMFELY--EIPPHIKPNWQ-VWYECVLPEDRQHAE 488 E G++ + + ++Y E P + ++ + + + R+ E Sbjct: 578 RGIFENAVEGMFRTTPHGRYLQANPALAKIYGFESPAELMRHYDDISRQLYVEAGRR--E 635 Query: 489 KVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLNKEGEVERLLGINMDMTEVKQLN 547 + IR + F E I KDG + I A V + G V G MD+T+ + + Sbjct: 636 EFIRLLGEKEEIFDFESAIRRKDGSVIWISENARAVKDAAGNVVCYEGTVMDITQRRAMQ 695 Query: 548 EALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVP--LLTVLH 605 +AL ++ + A+ +D +I +N E + G+ + E LG L V Sbjct: 696 QALDRQMALFGQLFEDSPLAIALVDTVGRIAQVNGGFETLFGYKRAEILGKDNRLFIVPE 755 Query: 606 ITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVL-V 664 + + + I +T ++++ + G V+ P+ G I ++ + Sbjct: 756 EQLSEINSIRQRILDGET----VQRETLRRTSRGDIVPVNLLGHPVRI--GGEITNIFWI 809 Query: 665 IQDVTESRKMLRQLSYSASHDALTHLANRASFEKQL-RILLQTVNSTHQRHALVFIDLDR 723 QD++E ++ RQ+++ A HD+LT L NR+ F ++L R + +T A + IDL++ Sbjct: 810 YQDISERKEFERQITHQAFHDSLTGLPNRSLFRERLGRAVERTKRRPDYHFAAMLIDLNK 869 Query: 724 FKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARF-IAT 782 FK VNDS GH AGDALL E+AS + S +RS D +ARLGGDEF +LL + +A+ Sbjct: 870 FKWVNDSLGHQAGDALLVEIASRLKSCVRSVDTVARLGGDEFAILLEEFRTNKEVISVAS 929 Query: 783 RIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTV 842 RI + V F+W G+ GAS GI L + A +++ ADIA Y +K GRG + V Sbjct: 930 RIQNEVR-RAFLWNGKEIVSGASVGIVLQTRDCAGAEDILRDADIAMYKAKERGRGHL-V 987 Query: 843 YEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWS-CEG 901 + + E M +E R I+ N L + H + + +L W E Sbjct: 988 FHNRMRQEVLEVINME-NELRRAIEGNSLEL--HYQPIFDVDGGKLEGFEALVRWRHPEH 1044 Query: 902 EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQ-----AAKAVASKGISISLPLSVAGLSS 956 +I F + L L + V + +Q A G+++S+ LS + Sbjct: 1045 GMIMPDRFIPLAEESGLIVPLGQWVVNAACRQLKSWDDESGTAEYGLTMSVNLSCKQFAQ 1104 Query: 957 ATLVNDLLEQL-ENSPLPPRLLHLIIPAEAILDHAESVQKLRL---AGCRIVLSQVGRDL 1012 TLV+ +L L EN PPRL I + ILD A + +KLR G + + G Sbjct: 1105 HTLVDMILRALRENDIAPPRLKLEITESAIILDPAAAAEKLRRLKEIGVLLAVDDFGTGY 1164 Query: 1013 QIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMD 1072 + L+ D L +D + + ++ I A LG++ A V ++ Sbjct: 1165 SSLSYLRQFPMDILKIDRSFISGTDTPKENAEIVRSIVDMAHSLGLRVTAEGVETQEQLE 1224 Query: 1073 TLSGIGVDLIYG 1084 L I D G Sbjct: 1225 RLQSINCDRAQG 1236 >UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RS22_9PROT Length = 1006 Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 177/717 (24%), Positives = 307/717 (42%), Gaps = 77/717 (10%) Query: 401 DGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFE 460 +G PL + +DI K+ E ++ E L +E+ G I +L+ + Sbjct: 304 EGKPLRSLGTTQDITARKQLEASLREQKEFFRLISESIGEHIAVLDLQGQRLYNSPSYGQ 363 Query: 461 LYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRAL 519 + ++ + + V PEDR+ ++V R + ++ ++E+R+ DG +RH+ A Sbjct: 364 FFGDTRDLRGSDS--FADVHPEDRERVKRVFRQTTETGRGQEIEYRLVRNDGSVRHM-AS 420 Query: 520 ANRVL-NKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKIT 578 A RVL +++GE R++ ++ D+TE KQ ++ ER+ T + + D I Sbjct: 421 AGRVLGDRQGEAARVVVVSRDVTERKQA-----EQWERIAATAFESQQGMFITDANAVIL 475 Query: 579 FMNPVAEKMSGWTQEEALG-VPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCR 637 +N ++G+ +E +G P L ++ G + R+ + Q + + R Sbjct: 476 RVNQAFTDITGYAADECIGQTPKL----LSSGRHDASFYAAMRESIERNGVWQGEIWNRR 531 Query: 638 SGGS-YDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASF 696 G + +I+ + DG V + D++ + ++ + A +DALT L NR Sbjct: 532 KNGDVFPEWLTISSVRDGDGVVTHYVSALTDMSAHKAAQEEIRHLAFYDALTGLPNRRLL 591 Query: 697 EKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDV 756 +LR+ + + + ++ AL+FIDLD FK +ND+ GH GD LL+++ + S +R D Sbjct: 592 HDRLRVAIASSVRSERQGALLFIDLDNFKTLNDTLGHDMGDRLLQQVGQRLSSSVREGDT 651 Query: 757 LARLGGDEFGLLL------PDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITL 810 +ARLGGDEF ++L P+ +R + +II +N + + G + S GITL Sbjct: 652 VARLGGDEFVVMLENLGERPEEAAGQSRIVGEKIIKLLNRPYDL-SGHDYHNTPSVGITL 710 Query: 811 IDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMS------------ 858 E+M +AD+A Y +K GR + ++P+ A + RA + Sbjct: 711 FGGQQVGIDELMKRADLAMYEAKASGRNALRFFDPRMQAVVTARADIEKDLRAAVGRQSF 770 Query: 859 -------LDEQWRMIKENQLMMLAH---GVASPR--IPEARNLWLI-SLKLWSCEGEIID 905 +D ++I L+ H G SP IP A LI L LW E Sbjct: 771 FLAYQPQVDASGQVIGAEALLRWQHQQRGTVSPAEFIPVAEETGLILPLGLWVLE----- 825 Query: 906 EQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLVNDLLE 965 + A + R E F ++S+ +S A V+ +L Sbjct: 826 --------TACAQAALWAARPGRERF------------TVSVNVSARQFRQANFVDQVLA 865 Query: 966 QLENSPLPPRLLHLIIPAEAILDHAESV----QKLRLAGCRIVLSQVGRDLQIFNSLKAN 1021 L S PR L L + +LD+ + + L+ G L G + LK Sbjct: 866 VLARSGAHPRNLKLELTESMLLDNVQDIIAKMSALKARGVGFSLDDFGTGYSSLSYLKQL 925 Query: 1022 MADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIG 1078 D L +D ++ + DE++ I A+ LG+ IA V D L+ G Sbjct: 926 PLDQLKIDQSFVRDLLTDPNDEVIARTIIALARTLGLSVIAEGVESVEQQDALAAQG 982 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 49/208 (23%), Positives = 92/208 (44%), Gaps = 14/208 (6%) Query: 391 LLAVSLVRHTDGTPLYFIAQIEDINEL-----KRTEQVNQQLMERITLANEAGGIGIWEW 445 LL V LVR + ++I+D+ L +RT ++ + + + A +G W + Sbjct: 172 LLIVFLVRS-------YQSRIDDVRRLASDLAQRTAELQAREAD-LNRAQAVANVGSWVY 223 Query: 446 ELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEF 505 +L + +P + + V P+DR ++ +L+ PF E Sbjct: 224 DLVSGRIDMSAETCRILGLPTGTVGSLDAFMARVHPDDRDTLQQAAAAALRG-EPFDNEL 282 Query: 506 RITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIG 565 R+ + R I A ++EG+ R LG D+T KQL +L ++KE + +SIG Sbjct: 283 RLVFGETTRWITQRAEVEFDEEGKPLRSLGTTQDITARKQLEASLREQKEFFRLISESIG 342 Query: 566 EAVVCIDMAMKITFMNPVAEKMSGWTQE 593 E + +D+ + + +P + G T++ Sbjct: 343 EHIAVLDLQGQRLYNSPSYGQFFGDTRD 370 >UniRef50_Q2SCC3 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SCC3_HAHCH Length = 848 Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 103/307 (33%), Positives = 161/307 (52%), Gaps = 8/307 (2%) Query: 544 KQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTV 603 + + L E+ RL TL SI + V+ +D + FMNP+AE+++GW++ A+ P + + Sbjct: 278 RTIRSMLATERNRLRTTLMSISDGVIKVDERAHVMFMNPMAEQLTGWSERAAMEKPFVVI 337 Query: 604 LHITFGDNGPLMEN---IYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNI- 659 + N + A T R A + GS + I + G Sbjct: 338 CPLKTLKEPRHPANPVEFFLAQTQRDAQIESYAFESAEDGSRTLEIRIRRVVGGGGRGDR 397 Query: 660 ---GSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHAL 716 G+V+V++D+++ ++ RQL + A HD LT L NR + + L LL N TH L Sbjct: 398 LCNGAVIVLRDISDEVRLRRQLEHQALHDPLTDLPNRRALDNYLHRLLSE-NDTHLVSGL 456 Query: 717 VFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVES 776 ++IDLD+FK +ND+ GH GD LL++L+SL+ +LAR+ GDEF L++ Sbjct: 457 LYIDLDQFKLINDTCGHEVGDLLLKKLSSLLRKSTPERGMLARISGDEFALVIEGVTEAQ 516 Query: 777 ARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGG 836 +A ++ ++ Y +E V VGAS G+T I D ++ V+S+ADIACY +K G Sbjct: 517 TLAVAEQVRQTISHYQLAYEDLVFSVGASIGVTFITDQDNSRHAVLSRADIACYQAKESG 576 Query: 837 RGRVTVY 843 R RV VY Sbjct: 577 RDRVRVY 583 >UniRef50_Q3J1Y6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Rhodobacter sphaeroides RepID=Q3J1Y6_RHOS4 Length = 833 Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 196/787 (24%), Positives = 325/787 (41%), Gaps = 48/787 (6%) Query: 320 TEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKR 379 +GQ + N+A C LG + L G +L +Q+ + + S+ Sbjct: 39 AQGQVIFANRAACDLLGRDRSGLAGGAEHELV----AGTQAEQIASFDAEAMRRGSVSAE 94 Query: 380 YYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGG 439 V L + R G + + +I +L+ TE V +Q + E Sbjct: 95 QEMPGPRGVRRFL---VSRRPAGE--HLVVTFFEITDLRETEGVLRQREAHLRNLLELHP 149 Query: 440 IGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRS 499 + + + + R+ + +P + + W+ + P DR+ + S++ Sbjct: 150 VAPFSFTADGVLSDLSDRLVAITGLPAGTR-HVDAWWAAMHPCDRRDLRRAWIRSVRGGQ 208 Query: 500 PFKLEFRITVKDGI-RHIRA-LANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERL 557 F E R+ + DG R RA + R +++ V+R GI D+ E + E L + + R Sbjct: 209 SFDAEHRLQMPDGAYRWFRARIVARPRDQDQRVDRWFGIIEDVHERRTTVEQLRESEARF 268 Query: 558 HITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMEN 617 D + D + F++ +G + +EALG + +H D Sbjct: 269 RAFADDAPVMIWVTDTEGRNVFVSRSWLGATGQSLDEALGTGWIDAVHPD--DRDATAAI 326 Query: 618 IYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESR----- 672 A R A + + + GG V P DG+ IG + D++ R Sbjct: 327 TREAMRRRIAYTNEFRIRRKDGGWCWVIDVGHPRLLADGTFIGYIGCCVDISARRQAEDD 386 Query: 673 KMLRQLS--YSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDS 730 +++ QL + A HD LT L NR F + + ++ + + A++ +DLD FK VND+ Sbjct: 387 RVMAQLQVFHMARHDMLTGLPNRHYFGDCYQEAVASL-APERSVAVLMLDLDGFKTVNDT 445 Query: 731 AGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLL-LPDCNVESARFIATRIISAVN 789 GH GD +L E+A+ + + +RS+D +ARLGGDEF ++ P + + A +A R+I+A++ Sbjct: 446 RGHPVGDQVLCEVANRLRTSVRSTDTVARLGGDEFAVIQTPIRSEQEACDLARRLIAAIS 505 Query: 790 DYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYE----- 844 F EG V VGAS GI + A E+M AD+A YA+K GRG V++ Sbjct: 506 -KPFDLEGAVPEVGASVGIAFARGHGDSAEEIMRYADVALYAAKQAGRGTFRVFDEATDT 564 Query: 845 ---PQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEG 901 +Q + RAA+ L E + L+ L G + EA W W Sbjct: 565 HLQSRQKMKAALRAALGLGEL--SVFYQPLIGLRDGQVT--ACEALMRWHRKGAGW---- 616 Query: 902 EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLVN 961 I F + L + V HE QAA+ S +S+++ LS LV+ Sbjct: 617 --ITPDQFIPLAEEAGLIGDMGDWVLHEACAQAARWPDS--VSVAVNLSPLQFHGGALVD 672 Query: 962 DLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNS 1017 + L S LPP L L I +LD + +Q LR G +IV+ G Sbjct: 673 QVASALRASGLPPERLQLEITESVLLDPTDRNIGVLQDLRALGAKIVMDDFGTGYSSLGY 732 Query: 1018 LKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGI 1077 L++ D + +D ++ ++ + G + L M+T V +D Sbjct: 733 LRSFPFDKIKVDRSFIRDLPDAREALAILKAVAGLGRSLDMRTTVEGVETQAQLDCAIAE 792 Query: 1078 GVDLIYG 1084 GVD G Sbjct: 793 GVDEAQG 799 >UniRef50_Q15NS8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15NS8_PSEA6 Length = 965 Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 122/438 (27%), Positives = 206/438 (47%), Gaps = 22/438 (5%) Query: 660 GSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFI 719 GSV+ D++ + + + Y ASHD LT R +FEK L + + L+ + Sbjct: 512 GSVV---DISARKSDHQSIEYMASHDTLTGFYQRQAFEKSLHEAILFAKQQQEELTLLHV 568 Query: 720 DLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARF 779 ++D+FKA+ND+ GH AGDA+LR+L+ LM ++ ++ RLGGDEFG+LL N +++ Sbjct: 569 NIDQFKAINDTHGHKAGDAVLRQLSQLMKKIVSDDGMIGRLGGDEFGILLVGNNAQNSFM 628 Query: 780 IATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGR 839 +A ++++AV + F WE R +G S G +D + +++S AD ACY +K GR R Sbjct: 629 LANKLLNAVQVHEFTWEERPLTLGVSIGQVPWNDTISSSEQLLSMADSACYMAKKHGRNR 688 Query: 840 VTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGV---ASPRIPEAR----NLWLI 892 + Y + +++ + Q + Q + +G P +P + + I Sbjct: 689 LHTY------SSTDKQIAKYESQLSWLPRIQHALSHNGFELHCQPYMPMTSIAKGHHYEI 742 Query: 893 SLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKG--ISISLPLS 950 L+L + I F + LS +DR V +F A+ K + ++ LS Sbjct: 743 LLRLVDEHDQRILPSEFLPAAERYNLSAKIDRWVIDTYFAWLAQNPQHKADLMRCNINLS 802 Query: 951 VAGLSSATLVNDLLEQLENSPLP-PRLLHLIIPAEAILDHAESVQ---KLRLAGCRIVLS 1006 L L +L E +P ++ I + AIL E+++ + GC L Sbjct: 803 GHSLGEQDLKLFILSAFEKYQVPHNKICFEITESMAILKLDETIEFIDTFKALGCTFALD 862 Query: 1007 QVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVV 1066 G +N LK D + +DGE N+ +D ++ I+ A + ++T+A V Sbjct: 863 DFGSGFSSYNYLKNLPVDQVKIDGEFVKNILIAPVDMAMVNSIKDIASAMKIQTVAEYVE 922 Query: 1067 LPLVMDTLSGIGVDLIYG 1084 +M L IGVD + G Sbjct: 923 SKEIMVELGKIGVDFVQG 940 >UniRef50_Q3ILC0 Putative orphan protein ; putative sensory-box domain n=3 Tax=Alteromonadales RepID=Q3ILC0_PSEHT Length = 843 Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 150/570 (26%), Positives = 256/570 (44%), Gaps = 55/570 (9%) Query: 550 LFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTV------ 603 LF +R+ + L+++ V+ +D I F+NP E +SG+ + L L Sbjct: 279 LFSAHQRILLHLNTV---VLELDQQGLIRFINPAWEALSGFGVKSTLQQQLTNFCIAECQ 335 Query: 604 --LHITFGD---NGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSN 658 L T D G + + ++ + + + CR + H + T +T+D Sbjct: 336 VKLQATIDDILCGGEYKQQVEIRLQHKNGSQ--IWVECRLQLIQNSHNNATITATID--- 390 Query: 659 IGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQ--RHAL 716 ++ E ++ QL + A HD LT L NR F++QL + Q TH HAL Sbjct: 391 --------NIHERKQAELQLRHLALHDTLTGLHNRYYFDQQLNRICQP-QHTHSDIEHAL 441 Query: 717 VFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVES 776 ++IDLD FK +NDS GH GD +L+E+A L ++ + + ++ R+GGDEF ++L N+ Sbjct: 442 IYIDLDHFKIINDSKGHQQGDIVLKEVAQLFITNISTEHLVFRVGGDEFAVILKHTNLLD 501 Query: 777 ARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGG 836 A IA I +A+ F E +++ + S G+T I + N +E + QADIA Y +KN G Sbjct: 502 AHLIAEGICNAIEQNQFKSEEQIYSISCSIGLTQITEKNCDPSECLKQADIALYIAKNLG 561 Query: 837 RGRVTVYEPQQAAAHSERAAMSLDEQWRM-IKENQLMMLAHGVASPRIPEARNLWLISLK 895 R V Y Q A ++ + + R ++++ + + + R E ++ L+ Sbjct: 562 RNLVHCYAKQDAHNNTLQTGLEWGHGIRQALQQDSIELHYQPIWDFRRNEVAYFEVL-LR 620 Query: 896 LWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAGLS 955 L +I DE F F P+L D + + +A+ + L LS Sbjct: 621 L-----KINDELVFPNQFI-PSLEMLNDTFLMDQCV--IRNTIANVALYPELNQVAINLS 672 Query: 956 SATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES------------VQKLRLAGCRI 1003 + + +++ L L S L + ++P + I + ES ++KL + GC Sbjct: 673 AQSFLDERLVPLIESNLAK---YQVLPTQIIFEITESASINNLAATRKMIEKLNILGCHF 729 Query: 1004 VLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAG 1063 + G FN LK A ++ +DG ++ + +D L+ I + L +++A Sbjct: 730 SIDDFGTGFSTFNYLKQLPAQHVKIDGSFVCDMLNDPIDLALVKAINDISHSLDKRSVAE 789 Query: 1064 PVVLPLVMDTLSGIGVDLIYGEVIADAQPL 1093 V V L IGVD G IA P+ Sbjct: 790 YVETEEVFFALKEIGVDYGQGYFIARPMPI 819 >UniRef50_B4RSB4 PAS sensor diguanylate cyclase and phophodiesterase n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4RSB4_ALTMD Length = 950 Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 152/609 (24%), Positives = 273/609 (44%), Gaps = 69/609 (11%) Query: 539 DMTEVKQLNEALFQEKERLHITLDSIGEAVVCID-MAMKITFMNPVAEKMSGWTQEEALG 597 D+TE + + L + +E+ +D + V + +++ EK+ G+ QE Sbjct: 344 DVTERFKAQQDLKRSEEKYRRLVDGMHRHFVYTKTVDHTFIYVSAGLEKILGYAQE---- 399 Query: 598 VPLLTVLHITFGDNGPLMENIYSADT-------SRSAIEQDVVLHCRSGGSYDV--HYSI 648 TF N P +T +R + ++H +S G V +S Sbjct: 400 ---------TFCKNEPKYVRQVPDETFEIREIIARGNKPEPYLVHYQSSGGKSVVLEFSD 450 Query: 649 TPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLR-ILLQTV 707 TP+ G+ I + +DVT+ + ++ + A+HD LT L NR +F+ QLR ILL T Sbjct: 451 TPILDDAGALIAIEGIARDVTKELVLQEEVFFQANHDQLTGLLNRYAFDAQLREILLHTN 510 Query: 708 NST-------------------------HQRHA----LVFIDLDRFKAVNDSAGHAAGDA 738 +S H+ A + FID+DRFK VNDS GH AGD Sbjct: 511 DSAEYTPFSVTGKSGGINSKTNVTAINLHREPAKPSVMCFIDMDRFKLVNDSCGHPAGDK 570 Query: 739 LLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGR 798 LL+E++++ + D+LAR+GGDEF ++ + +++ +++ AV++Y F+++ + Sbjct: 571 LLKEISTIFRQFVNGQDLLARIGGDEFCIIFRNQSLDEVTQCLDKLLLAVSNYRFVYDDK 630 Query: 799 VHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVY---EPQQAAAHSERA 855 + VGAS G+ I+++ A ++ AD ACY +K+ GR R V+ + Q A SE Sbjct: 631 LFFVGASIGVIEINESTQSAEALIKAADNACYKAKHLGRNRYFVFRENDSQMAIDDSENQ 690 Query: 856 AMSLDEQWRMIKENQLMMLAHGVASPRIPEAR-----NLWLISLKLWSCEGEIIDEQTFR 910 L + ++ + + + + +P+ + I L+L S E +I F Sbjct: 691 V--LHALHKALQHDGFELYSQAIMPLTVPQEEQGAHLQHYEILLRLNSKESGLISPGLFI 748 Query: 911 RSFSDPALSHALDRRVFHEFFQ--QAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLE 968 L + +D V + ++ A +++ LS L ++ + ++++ Sbjct: 749 PLAERHGLMNKVDLWVVDNTLKTLESNPAHIDNVGKVAINLSGITLGDEMALHKIAQRMQ 808 Query: 969 NSPLPP-RLLHLIIPAEAI--LDHAES-VQKLRLAGCRIVLSQVGRDLQIFNSLKANMAD 1024 ++ +P ++ I A+ L+ A+ + LR GC L G + F LK D Sbjct: 809 STTVPAEKICFEITETTAVTNLNAAKHFISTLRDIGCSFALDDFGAGMSSFTYLKNLDVD 868 Query: 1025 YLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYG 1084 Y+ +DG N+ + +D +T I A +G +T+A VV + L + VD G Sbjct: 869 YVKIDGSFVRNIVHDPIDHATVTAINNIAHSMGKQTVAEFVVDNATAEVLRKLKVDYGQG 928 Query: 1085 EVIADAQPL 1093 + +PL Sbjct: 929 FALDKPKPL 937 >UniRef50_B8GQW3 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GQW3_THISH Length = 926 Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 151/581 (25%), Positives = 267/581 (45%), Gaps = 26/581 (4%) Query: 533 LLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQ 592 L G+ +D++ +Q AL + R ++ + E + D + T +NP E+++G++ Sbjct: 342 LRGLTLDVSPQRQAALALKDSESRYREVIEHVSEVIFRTDHQGRWTLLNPAWEELTGYSI 401 Query: 593 EEALGVPLLTVLHITFGDNGPLMENIYSA--DTSRSAIEQDVVLHCRSGGSYDVHYSITP 650 E+LG P V ++ PL+E + + ++S + ++ L R+G V + Sbjct: 402 AESLGRP---VSEFVSAEDSPLLEALTNQLLHGNKSQLRDELRLLTRAGEPRWVSVFVRS 458 Query: 651 LSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNST 710 +G I + + D+TE ++ ++ A +D+LT L NR+ +LR+ + + + Sbjct: 459 SQDAEGRVIATFGTLTDITERKRAEEEIRRLAFYDSLTELPNRSLLYDRLRLAMASAARS 518 Query: 711 HQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLP 770 A++F+DLD FK +ND+ GH GD LLR++AS M +R +D LARLGGDEF ++L Sbjct: 519 RHHGAILFLDLDNFKDINDTLGHDVGDELLRQVASRMQGTIRETDTLARLGGDEFVIILN 578 Query: 771 DCNVESAR------FIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQ 824 D + E A+ + ++++ + + + E H S G TL D E++ Q Sbjct: 579 DLHPEQAQAAVEAETLGSKLLHLLAEPFRLGEHERH-CTPSIGATLFGDGEVNVDELLKQ 637 Query: 825 ADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIP 884 AD+A Y +K+ GR + +EP+ RAA+ D + + ++E+QL H P + Sbjct: 638 ADLAMYRAKDSGRNTLCFFEPEMHQVVKARAALEADFR-KALREDQL----HLHYQPHVD 692 Query: 885 EARN-LWLISLKLWS-CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAA---KAVA 939 + + L +L WS E ++ F L L R V QQ A + Sbjct: 693 DQGHILGAEALLRWSHPERGMVPPMEFIAVAEQTGLIIKLGRWVLQTACQQLALWHRESQ 752 Query: 940 SKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESV----QK 995 I++++ +S V ++ E L+++ P + L L + +L+ E+V Sbjct: 753 WMRINMAVNVSAKQFRHPDFVREVAEILQSTGAPAQHLVLELTESLLLEDTETVITRMNA 812 Query: 996 LRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQR 1055 LR G L G + LK L +D ++ + D + +I A+ Sbjct: 813 LRELGVGFALDDFGTGYSSLSYLKRLPLSLLKIDQSFVRDILVDANDAAIAEMIITLAKT 872 Query: 1056 LGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 LG++ IA V P D L +G G + P+D L Sbjct: 873 LGLEVIAEGVETPEQRDFLLEMGCHQFQGYLFGRPGPVDQL 913 >UniRef50_A6UJR0 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=Alphaproteobacteria RepID=A6UJR0_SINMW Length = 1071 Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 202/832 (24%), Positives = 359/832 (43%), Gaps = 89/832 (10%) Query: 297 ISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDL 356 + ESE FR + + + + + G N+ + G ++ E G + + P+D Sbjct: 264 LRESEARFRAIADDAPVMIWVADPTGDTSFFNRLWLETTGQTEAEALGFGWVDVIHPDDR 323 Query: 357 NKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWA-LLAVSLVRHT-DGTPLYFIAQIEDI 414 + K +G+ T S Y R D WA ++ V R + DGT L ++ + DI Sbjct: 324 QAVQEIFFKATAGKGPTRS---EYRLRRADGSWAWVIDVGQPRFSADGTFLGYVGSVLDI 380 Query: 415 NELKRTEQVNQQLME---RITLANEAGGIGIWEWELKPNIFS-WDKRMFELYEIPPHIKP 470 + +R ++ QQ + R + + + + E +P + + +R+F L E P Sbjct: 381 TD-RRAGEIAQQEAQAFIRSIFDSSPDCVRVLDLEGRPLLMNEAGRRIFGLNEDAPITGQ 439 Query: 471 NWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG---IRHIRALANRVLNKE 527 W + + +R +R F ITV+D R + +A + + Sbjct: 440 TWDSIGRASDAHKVEAGWESVRHGKTAR------FEITVRDAGGEERCMDVIAAPITDNL 493 Query: 528 GEVERLLGINMDMTEVKQLNEALFQEKE-------RLHITLDSIGEAVVCIDMAMKITFM 580 G+ R+L I D+T+ K ++ + + ++ +L L+S ++V+ +D ++ ++ Sbjct: 494 GKPSRILSIWRDITDAKLASDEISRAQKHAEAAASQLSSVLESTMDSVMLLDADWRVRYL 553 Query: 581 NPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVL----HC 636 N A+K+ +EALG + P E A R +E+ V H Sbjct: 554 NENAKKLLQ-IGDEALGKKFWKLF--------PEEEMGNFAKHCREVMERRVRSFFEDHL 604 Query: 637 RSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKM-------LRQLSYSASHDALTH 689 S G + + + +P T DG +I +D+TE R+ +QL++ A HD LT Sbjct: 605 PSLGRW-IEANASP--TQDGISI----FCRDITERRRAEEDTLLAQKQLAHMARHDMLTG 657 Query: 690 LANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLS 749 L NR F + L S H R A++ +DLD FKA+ND+ GH AGD LLR+++ ++ Sbjct: 658 LPNRMFFRECFEQALN--ESRHARMAVLCLDLDGFKAINDTLGHPAGDVLLRQVSQRLIQ 715 Query: 750 MLRSSDVLARLGGDEFGLLLPDCNVESARF-IATRIISAVNDYHFIWEGRVHRVGASAGI 808 +R+++ +ARLGGDEF ++ P F +A R+I +++ F EG VG S GI Sbjct: 716 SVRTTETVARLGGDEFAIIQPLAKSRDEAFHLAQRLIDTLSE-PFSIEGAAATVGTSIGI 774 Query: 809 TLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKE 868 ++ A E++ ADIA Y++K+ GRG +++ A H++ A Sbjct: 775 AFAPEDGTSADELIKAADIALYSAKSSGRGTYRLFD---VAMHAQLQA-----------H 820 Query: 869 NQLMMLAHGVASPRIPEARNLWLISL--KLWSCEGEIIDEQTFRRSFSDPALSHALDRR- 925 Q+ + + R E L++L + SC ++ + +R P+ + Sbjct: 821 QQMKVAMRDALANREFELHYQPLVNLESRCVSCCEALLRWRHPQRGMIAPSEFIPIAEET 880 Query: 926 ---------VFHEFFQQAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRL 976 + E +QAA+ + +S+++ LS LV + L +S L P Sbjct: 881 GAIVLIGEWLLDEACRQAAR--WPERVSVAVNLSPVQFKHRNLVGAVANALSSSHLDPAR 938 Query: 977 LHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGEL 1032 L L I +LD +E +Q LR G +I + G L++ D + +D Sbjct: 939 LQLEITETVLLDESEHNLELLQDLRRLGVKIAMDDFGTGYSSLGYLRSFPFDKIKVDQAF 998 Query: 1033 CANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYG 1084 ++ ++ + G Q LGM T V + ++ G D + G Sbjct: 999 VRDLPHGRESLAIVKAVAGLGQSLGMTTTVEGVETEDQLAIVNSEGFDEVQG 1050 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 80/363 (22%), Positives = 146/363 (40%), Gaps = 37/363 (10%) Query: 328 NKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDV 387 N+A C L + EL G T L E +K + +++++ + +E++ +G Sbjct: 41 NEAACFLLDKDRNELLGRTDHDLLPTEQADK-IVALDRVVLSTGEGHEIEEQITTPDGTS 99 Query: 388 VWALLAVSLVRHTDGT--PLYFIAQIEDINELKRTEQVNQQLMERI-TLANEAGGIGIWE 444 L V G+ + + I DI EL+ E+ + E +L + Sbjct: 100 RTLLTKKRPVSIPTGSTEEKFVVVTIVDITELRGIEETLRASEEHYRSLVD--------- 150 Query: 445 WELKPNIFSWDKRMFELYEIPPHIKPNW-------------QVWYECVLPEDRQHAEKVI 491 L P + R E+ E+ P W + W + V P+D + Sbjct: 151 --LHPQVPWIADRAGEVLEV----GPRWSELTGLGEKETLGKGWAKAVHPQDAGALQDAW 204 Query: 492 RDSLQSRSPFKLEFRI-TVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEAL 550 R SL + +P E+R+ T+ R RA A + + ++ R G+ D+ E ++ +AL Sbjct: 205 RRSLTNGTPLDWEYRLLTMTGEYRWFRARAAAKRDADEKIVRWYGLLEDVDERRRAADAL 264 Query: 551 FQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGD 610 + + R D + D +F N + + +G T+ EALG + V+H D Sbjct: 265 RESEARFRAIADDAPVMIWVADPTGDTSFFNRLWLETTGQTEAEALGFGWVDVIHPD--D 322 Query: 611 NGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSI-TPLSTLDGSNIGSVLVIQDVT 669 + E + A + + L R+ GS+ + P + DG+ +G V + D+T Sbjct: 323 RQAVQEIFFKATAGKGPTRSEYRLR-RADGSWAWVIDVGQPRFSADGTFLGYVGSVLDIT 381 Query: 670 ESR 672 + R Sbjct: 382 DRR 384 >UniRef50_Q2RQN5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RQN5_RHORT Length = 820 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 151/567 (26%), Positives = 246/567 (43%), Gaps = 52/567 (9%) Query: 556 RLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPL-----LTVLHITFGD 610 RL L+S + ++ +D I +N AE++ G T++EA+G PL L L G+ Sbjct: 251 RLQSVLESTSDGIITVDDKGSIESINGAAERVLGLTRDEAVGRPLGDLIPLDRLAEDGGE 310 Query: 611 NGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTE 670 G L + + +++ L R H S+ + G +I DVT+ Sbjct: 311 EGALSRRLLALRG------REIDLPARRADGAAFHLSLKLSDFMLGERRYFNALIADVTD 364 Query: 671 SRKMLRQLSYSASHDALTHLANRASFEKQL-RILLQTVNSTHQRHALVFIDLDRFKAVND 729 + M+ +L++ A D LT L NR SF L + + + A++ IDLDRFK VND Sbjct: 365 RKAMIDRLTFLAQRDPLTGLINRRSFFDDLEKAVARAGRFPAAGVAVISIDLDRFKYVND 424 Query: 730 SAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVN 789 S GH AGD LL+E+A ++ LR +D+LARLGGDEF +LL N E A +A + + Sbjct: 425 SLGHQAGDCLLKEVAEVLFGRLRETDLLARLGGDEFAVLLHGVNREGALHVAEALRLCLA 484 Query: 790 DYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAA 849 DY F ++G+ +G S G+ + +++++AD+A +K GR RV ++E Sbjct: 485 DYAFSYDGKSVEIGCSLGVATWAADVDDPEDLLARADMAMRLAKRAGRNRVHLFEEGDLE 544 Query: 850 AHSERAAMSLDEQW-RMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQT 908 RA + D + ++I L V P I G ++ +T Sbjct: 545 V---RARVVADAGYSKLIDRGLRNNLFRPVFQPIID-------------VTSGAVVGHET 588 Query: 909 FRRSFSDPA-----------------LSHALDRRVFHEFFQQAAKAVA-SKGISISLPLS 950 R DPA L+ +DR++ + A+ +G +S LS Sbjct: 589 LAR-LHDPAAIGLTMDVLIPVAERFGLAVEIDRQIILAVTEALAEDAGWLEGGFLSFNLS 647 Query: 951 VAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQKLRLA----GCRIVLS 1006 + + + + + LPP+ L I A + + + A GC+ L Sbjct: 648 AQSVGDGRIFSAVRRLIATRRLPPQALIFEITETAAIASLAAARTFLKALTDLGCKTALD 707 Query: 1007 QVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVV 1066 G F L+ D+L +DG ++ + + ++ I A +GM+TIA V Sbjct: 708 DFGSGYSSFTYLRELPVDFLKIDGRYVRDIHHDPVKAAMVQAINTVAHAMGMRTIAECVE 767 Query: 1067 LPLVMDTLSGIGVDLIYGEVIADAQPL 1093 ++ L GVD G + PL Sbjct: 768 EASGLEVLRQSGVDCAQGFLFGRPAPL 794 >UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=16 Tax=Proteobacteria RepID=A1RPJ9_SHESW Length = 1511 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 166/666 (24%), Positives = 290/666 (43%), Gaps = 26/666 (3%) Query: 429 ERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAE 488 ER+ LA A G G+W+W +K N + H + +E + PEDR+ + Sbjct: 837 ERLKLALWASGDGMWDWNIKENKVYRTNMDASVSHWSSH-----NLLHENMHPEDREKFK 891 Query: 489 KVIRDSLQSRSPF-KLEFRITVKDGIRHIRALANRVLNKEGEVE--RLLGINMDMTEVKQ 545 + + LQ R+PF ++E+RI G +V+ + ++ R+ G N ++T K Sbjct: 892 YELAEHLQGRTPFFEIEYRIEGAFGKWIWILDRGKVVETDAHMQPMRMTGTNRNITSRKL 951 Query: 546 LNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLH 605 + L + L+S+ EAVV + KI +NP ++G+++ + L+ H Sbjct: 952 IENELVLSSQ----VLNSMNEAVVVAGLDYKIRSVNPAFSAITGYSERQITDKYLV---H 1004 Query: 606 ITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVI 665 + + L +I ++ + + + V I + + G V V Sbjct: 1005 LAYKQQRELFNSIEQQLLRHKHWVGEIWIRNKQRKAILVWLEINQVIDIKGETSHFVAVF 1064 Query: 666 QDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFK 725 D+TE +K + L + AS D LT L NR F+ +L + + + AL+F+DLDRFK Sbjct: 1065 TDITERKKAEQDLRFLASFDTLTGLPNRTLFQDRLNHAITQAHRANNIVALLFLDLDRFK 1124 Query: 726 AVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD-CNVESARFIATRI 784 +NDS GH GD LL+ A + + +R D +ARLGGDEF ++L ++A I+ ++ Sbjct: 1125 HINDSMGHHVGDLLLKAAAKRLQNAVREGDTVARLGGDEFTIILEGVAKTKAATLISEKV 1184 Query: 785 ISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYE 844 + A F+ E + + S GI+L ++ A ++ AD A Y +K+ GR Y Sbjct: 1185 LRAFQT-PFLLEDKSLTISTSIGISLYPNDADNADSLIKFADTAMYHAKSLGRNNFQFYT 1243 Query: 845 PQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEII 904 + + + + + I N+L ++ S R L + L+ E I Sbjct: 1244 HKLNEIATRHVLLEAGLK-QAIHRNELSLVYQPKFSLRDGSLTGLEAL-LRWHHTELGPI 1301 Query: 905 DEQTFRRSFSDPALSHALDRRVFHEFFQQAAK--AVASKGISISLPLSVAGLSSATLVND 962 F + + + + V + QQ A+ A+ IS+++ LS L A +++ Sbjct: 1302 SPVEFIPLAEETGIINQIGHWVINHACQQLAEWNALGFNNISMAVNLSARQL-KADIIST 1360 Query: 963 LLEQLENSPLPPRLLHLIIPAEAIL----DHAESVQKLRLAGCRIVLSQVGRDLQIFNSL 1018 + L S LP + L L + I+ D + KL+ G I + G + L Sbjct: 1361 IEVALAVSGLPAQSLELELTESMIMGNPQDSVSILSKLKALGLTIAIDDFGTGYSSLSYL 1420 Query: 1019 KANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIG 1078 K D L +D E ++ + D + + I A L + +A V ++ L G Sbjct: 1421 KRFPIDTLKIDREFVRDITNDPDDAAITSAIIALAHSLELNVVAEGVETQAQLNFLGLQG 1480 Query: 1079 VDLIYG 1084 D + G Sbjct: 1481 CDEVQG 1486 >UniRef50_B8KPY2 Diguanylate cyclaSe/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KPY2_9GAMM Length = 1521 Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 149/580 (25%), Positives = 250/580 (43%), Gaps = 29/580 (5%) Query: 536 INMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEA 595 + D++ QL AL +E+E H+ LD D I+++ P +M+G++ EE Sbjct: 945 VYQDLSITMQLRSALKEEQELFHLLLDWTSNTEYWTDADGNISYITPAVREMTGYSAEEF 1004 Query: 596 LGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVL--HCRSGGSYDVHYSITPLST 653 + P L I + ++ ++ + + L R G + + + + Sbjct: 1005 IETPGLLSGIIAESSRADWLRHVSPEESPAKDQWKTITLPIRKRDGSQVWIEHRFRIMYS 1064 Query: 654 LDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQR 713 D +G ++DV E K+ ++ A D LT+L NR +L N T+Q Sbjct: 1065 SDSKILGYRGTMRDVDEVHKLEKEARDLAFKDPLTNLPNRRMIAVKLDEARTVSNRTYQY 1124 Query: 714 HALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN 773 ALV +D+D FK VND+ GH GD LL E+A+ + LRS D +AR+GGDEF ++L Sbjct: 1125 GALVMLDIDHFKRVNDTDGHGVGDELLVEVAARLRQRLRSFDTVARVGGDEFLMILNALG 1184 Query: 774 VE--SARFIATRIISAV-----NDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQAD 826 + A A+RI + + ++ + H V S G+ L + A ++ QAD Sbjct: 1185 QDQMEASLTASRICNEIRADISSEQNLTGASTSHHVTGSFGVALFVGDKETAETLLKQAD 1244 Query: 827 IACYASKNGGRGRVTVYEPQQAAA-----HSERAAMSLDEQWRMIKENQLMMLAHGVASP 881 +A Y++K+ GR RV +++P+ A SE A + E +I QL A G A Sbjct: 1245 MALYSAKDNGRNRVKLFDPKMQADVDRRMASETALLGAQESGDLIMYYQLQTDAQGQA-- 1302 Query: 882 RIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS- 940 + EA W +G + F D L + V + F Q + A Sbjct: 1303 KAVEALLRW------KKPDGSMASPMEFMDVLEDQPLVSNIGHWVINTCFAQLKQWEADP 1356 Query: 941 --KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQ---- 994 + IS+ +S L + + +L + +E++ + PR + L + A+L ++ + Sbjct: 1357 DLHNLDISINISAGYLVNDSFTKELGQLIESNSVDPRRIILELTENALLVESDRISTLMY 1416 Query: 995 KLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQ 1054 KL G R L G + L+ L +D A + +L + ++ I Q Sbjct: 1417 KLSARGFRFSLDDFGTGFSSLSHLRDLPLAQLKIDQSFVAGLPDDLNCQSIVKSIVAVGQ 1476 Query: 1055 RLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLD 1094 L ++ +A V D L +G DL G + A P D Sbjct: 1477 ALNLEVVAEGVETRAQCDFLQSLGCDLYQGYLFAHPVPAD 1516 >UniRef50_Q7NTV0 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NTV0_CHRVO Length = 1390 Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 150/565 (26%), Positives = 253/565 (44%), Gaps = 34/565 (6%) Query: 293 ERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTW 352 ERK E R + + + + +G ++ N A C+ G+S ++LR + L Sbjct: 575 ERKRADED---LRLVLNEAGDAIWVTDVDGYFIFANPAACRLTGHSLDDLREMHIHDLVA 631 Query: 353 PEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIE 412 PE L + + K+ +G S K ++G V L + + DG +IA Sbjct: 632 PECLGLLAEHLAKINNGAF-LRSEWKLRLKKSGTVSVDLTSGKM---KDGR---YIAFGR 684 Query: 413 DINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP---HIK 469 D+ E R EQ + ++ G W+W L+ N F R + P HI Sbjct: 685 DLTEQHRAEQELRDRERQLARVIAGSDQGFWDWNLETNRFQVSPRWESMLGYGPGEMHIT 744 Query: 470 PNWQVWYECVLPEDRQHAEKVIRDSLQSR-SPFKLEFRITVKDGIRHIRALANRVL--NK 526 + WYE V PED + I+ +L ++E R + G RV+ N Sbjct: 745 AD--SWYEHVHPEDVERTRDSIQRNLSGEMKSHEVEIRCRTRGGDWRWILSRGRVVERND 802 Query: 527 EGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEK 586 GE + G + D+TE K Q ++ DS E ++ ++ IT +N + Sbjct: 803 RGEPLSMSGTHTDITERKVFE----QTQKEAAAVFDSSYEGILMVNPDGVITKVNNAFSR 858 Query: 587 MSGWTQEEALG-VPLLTVLH---ITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSY 642 ++G++ EEA+G P L I+F E ++++ ++ +SG Y Sbjct: 859 ITGYSAEEAIGQKPSLLASGKQPISF------YEELWNSVKGHDFWRGELWNRRKSGELY 912 Query: 643 DVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRI 702 SI+ + G + + D+T+ ++ +L A +D LT + NR +LR Sbjct: 913 AELLSISVVRDEQGQVQHYIGIFSDITQLKQHEAELDRVAHYDPLTGVPNRRLLSDRLRQ 972 Query: 703 LLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGG 762 + N + + A+ F+DLD FKAVND GHA GD LL +++ + S+LR D LARLGG Sbjct: 973 AIVRANRSGRSCAVCFLDLDGFKAVNDKYGHAVGDQLLVTVSNNLKSILRGDDTLARLGG 1032 Query: 763 DEFGLLLPDCNV-ESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEV 821 DEF +LL + E + R+++ + + + V V AS G++L +N + Sbjct: 1033 DEFVVLLSEVGSPEECMLVLDRVLATASRPMPVGDAEVG-VTASIGVSLYPQDNVDPDTL 1091 Query: 822 MSQADIACYASKNGGRGRVTVYEPQ 846 + AD A Y +K+ G+ R +++P+ Sbjct: 1092 LRHADQAMYLAKDAGKNRYQLFDPE 1116 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 52/220 (23%), Positives = 99/220 (45%), Gaps = 11/220 (5%) Query: 374 YSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITL 433 Y + +G+ W + R +G + ++DI E KR + R+ L Sbjct: 403 YECDVELLRADGESRWLTMRGEARRDEEGAIVSLYGTMQDITERKRMAMQVKASESRLQL 462 Query: 434 ANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKP-NWQVWYECVLPEDRQHAEKVIR 492 EA G W+W+L+ R +E+ P +++ + + V P D + + I Sbjct: 463 VAEATSDGFWDWDLRSGKVYRSSRYYEVTGTQPEDDSGDFRFFRQMVHPADLPYVLQAIE 522 Query: 493 DSLQSRSP-FKLEFRITVKD-GIRHIRALANRV-LNKEGEVERLLGINMDMTEVKQLNEA 549 + ++P +++FR+ +D G+R ++A V ++ G RL+G D+TE K+ +E Sbjct: 523 AHRRGKTPRIEIDFRLARQDEGVRWLQARGRAVEWDERGAAVRLVGNLSDITERKRADED 582 Query: 550 LFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSG 589 L + L+ G+A+ D+ F NP A +++G Sbjct: 583 -------LRLVLNEAGDAIWVTDVDGYFIFANPAACRLTG 615 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 74/383 (19%), Positives = 155/383 (40%), Gaps = 27/383 (7%) Query: 236 FLIFLTTVMMVSLMMAADPSLLATPRTYLM-----------SHMPW---LPFLLILLPAN 281 ++F+ +++ + M P LLAT + L + PW + L + L Sbjct: 124 LILFMLPIILGACMGGIGPGLLATVLSVLAVDLMVEPHLHAAQTPWHSKVQLLFLALNGL 183 Query: 282 IMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEE 341 ++++ R + ++ + ++ + + +G++L N+A F+G + E Sbjct: 184 AVSLLCEMLRQALERVALHRALLDAVVSSTSDAVFVKDVQGRYLLVNQAALAFVGKTSGE 243 Query: 342 LRGLTFQQLTWPEDLNKDLQQVEKLI--SGEINTYSMEKRYYNRNGDVVWALLAVSLVRH 399 + G + + + E+ ++L ++LI SG + T+ E+ +NG+ + L+ V + Sbjct: 244 VIGKDDRDV-FDEETARELIIQDRLIMQSGRVQTH--EEHLALQNGERMVFLVTKGPVYN 300 Query: 400 TDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMF 459 +G DI K+ E + + A + GIG W W+L + SW + Sbjct: 301 HEGLLGGLFGISRDITRQKQAENQLRDSEAMLQQAQQLAGIGSWSWDLVDDRQSWSPEAY 360 Query: 460 ELYEIPPHIKPNWQVWYECVLPED--RQHAEKVIRDSLQSRSPFKLEFRITVKDGIRH-- 515 L+ + P D Q +E V R L ++ + + DG Sbjct: 361 RLFGLTEKSGPPGYPAMRRYFDADGWAQLSEAVERCKLVGMG-YECDVELLRADGESRWL 419 Query: 516 -IRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMA 574 +R A R ++EG + L G D+TE K++ + + RL + ++ + D+ Sbjct: 420 TMRGEARR--DEEGAIVSLYGTMQDITERKRMAMQVKASESRLQLVAEATSDGFWDWDLR 477 Query: 575 MKITFMNPVAEKMSGWTQEEALG 597 + + +++G E+ G Sbjct: 478 SGKVYRSSRYYEVTGTQPEDDSG 500 >UniRef50_UPI0001AEC71A response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC71A Length = 701 Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 126/476 (26%), Positives = 234/476 (49%), Gaps = 16/476 (3%) Query: 530 VERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSG 589 V L I T++ ++N L EK++L ITL SI + V+ I+ A +TF+NPVA++++G Sbjct: 118 VRNHLTIQDQKTKLARVNHELEAEKKQLAITLKSIADGVISINAAGDVTFINPVAQRLTG 177 Query: 590 WTQEEALGVPLLTVLHITFGDNGPLMEN--IYSADTSRS-AIEQDVVLHCRSGGSYDVHY 646 +++ EALG P+ V+++ + N +Y+ + R A+ + L R + V Sbjct: 178 YSETEALGKPIDEVMNLRDASTNERLLNPALYALEVMRPVAMSYNATLVSRHNQVFRVED 237 Query: 647 SITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQT 706 + +P+ DG G+V+V QDV+E+ +M ++++ +HD LT L NR ++ + Sbjct: 238 TASPIIDEDGHLSGAVIVFQDVSEAIEMAVKMTHLTNHDQLTGLPNRVLLHDRVVQAITR 297 Query: 707 VNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFG 766 ++ Q AL+ ID+D FK +NDS GH GD ++ +A + ++ S LAR+GGDEF Sbjct: 298 CFTSKQSIALLLIDIDNFKYLNDSLGHQVGDYIIASIAKRLAKVVGESATLARVGGDEFA 357 Query: 767 LLLPDCNVE-SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQA 825 LL + SA IA + A + I +G+ H++ S GI+L + A E+M A Sbjct: 358 CLLTEIGSGYSADSIAMACLQAGREPIDI-DGKAHQLSLSIGISLYPQDAVNAEEMMRHA 416 Query: 826 DIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMML----AHGVASP 881 D A Y SK+ G+ + + A R M + + R EN + + + Sbjct: 417 DSAMYRSKSKGKDTFSFFSKDLQHAMHHRVEMEV--KLRNAIENDSLAIYLQPKYNFDDS 474 Query: 882 RIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVA-S 940 + A +L ++++ G++I F + L H L ++V + + A+ Sbjct: 475 AVLSAESL----VRMFDENGKVIGPDEFIPLAEETGLIHQLGKQVLQKSCEFVARCNELG 530 Query: 941 KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQKL 996 + +++ ++ LS+ ++ E + + + + L + A++ E + + Sbjct: 531 QDFKVAVNVAAKQLSNPGFAKEVAEIINEAGIAASSIELEVTESALMHDFEQTRDI 586 >UniRef50_B6BGA2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGA2_9PROT Length = 802 Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 168/711 (23%), Positives = 301/711 (42%), Gaps = 54/711 (7%) Query: 404 PLYFIAQIE-------DINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDK 456 PLYF ++ DI E ++ ++L ++ A E IG WE L N W Sbjct: 97 PLYFNGEVSAVLGIFWDITEFNEEKEHFKKLEYGLSKAQELANIGHWELNLVTNDLFWSD 156 Query: 457 RMFELYEIPPH-IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IR 514 ++ ++ + P ++ + E + P+D + DS+ +R + + RI K+G + Sbjct: 157 EVYRIFGLKPQEFGATYEAFLEHIHPDDVELVNSSYSDSITNRCGYHVTHRIVRKNGEVG 216 Query: 515 HIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMA 574 + + +G V R +G D+T+ K L E + + VV D Sbjct: 217 FVEERCEHEFDNDGNVLRSIGTVHDITKQKIAQNELMLASE----VFSKMSDGVVITDAN 272 Query: 575 MKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFG-DNGPLMENIYSADTSRSAIEQDVV 633 I +N K++G+T EE +G +T + G + + ++ +++ Sbjct: 273 QSIIKINESFTKITGYTNEELIG---MTPKAFSSGWHDEAFYKKMWDDIKQNGQWSGEII 329 Query: 634 LHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANR 693 +S Y +I L DG + + D+++ ++ + + A D+LT L NR Sbjct: 330 DRKKSSERYIAEMNIIALHNDDGILTNYISITNDISKKKEQEKLIHNLAYFDSLTDLPNR 389 Query: 694 ASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRS 753 FE+++ + ++ AL+FID+D FK VND+ GH GD L E+++++ + +R Sbjct: 390 VLFEERVVSRIPFSKRHDKKMALLFIDMDNFKNVNDTLGHFMGDMFLIEVSNIIKNSIRE 449 Query: 754 SDVLARLGGDEFGLLLPDCN-VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLID 812 D LARLGGDEF +LL D N + IA +II+A N+ I E + G S GI+L Sbjct: 450 QDTLARLGGDEFTVLLEDINSIMDIVPIAEKIIAAFNNPVLI-ESKELYTGISMGISLYP 508 Query: 813 DNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWR-MIKENQL 871 D+ E+ AD A Y K G+ ++ +ER + L+ R I N+L Sbjct: 509 DDGKSYNELFKAADTAMYQVKASGKNNFQFFKQSMNEKITER--LFLENSLRNAIGNNEL 566 Query: 872 MMLAHGVASPRIP-EARNLW-LISLKLWSC-EGEIIDEQTFRRSFSDP-----------A 917 + V P+I E + ++ + +L W E +I F S S+ A Sbjct: 567 FL----VYQPKINLETKRVYGMEALIRWRHPEIGLIRPDKF-ISISEETGQIYNIGLWVA 621 Query: 918 LSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLL 977 +D + HE A +++S+ +S L + ++D+ + + + Sbjct: 622 KQAIIDTKALHE---------AGHILTVSINVSSKQLENEKFIDDICCVVNEIGIDKSYV 672 Query: 978 HLIIPAEAILDHAESVQK----LRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELC 1033 L I I+ + + K L G ++ + G + LK A + +D Sbjct: 673 ELEITESHIMSNIDKALKILNELSDKGFKLSIDDFGTGYSSLSYLKKLPAQTIKIDRSFV 732 Query: 1034 ANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYG 1084 ++ + D ++ I A+ LG IA +DTL + + + G Sbjct: 733 LDIYKDEDDRSIVATIIAMAKALGKDVIAEGSETQEHIDTLKYLHCNKVQG 783 >UniRef50_UPI0001AEBED2 PAS sensor diguanylate cyclase and phophodiesterase n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEBED2 Length = 992 Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 125/501 (24%), Positives = 234/501 (46%), Gaps = 63/501 (12%) Query: 644 VHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRIL 703 + +S TP+ G + + +DVT+ + ++ + A+HD LT L NR +F+++LR + Sbjct: 491 IEFSDTPIVDEQGLLVAVEGIARDVTKELALQEEVYFQANHDQLTGLFNRYAFDEKLRAI 550 Query: 704 LQ------------------------TVNST---HQRHALVFIDLDRFKAVNDSAGHAAG 736 L ++NS H++ + FID+DRFK VNDS GH AG Sbjct: 551 LDETHKAAGQQGESKALNHIDFEKVASINSPRAYHKQSVMCFIDMDRFKLVNDSCGHPAG 610 Query: 737 DALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWE 796 D LL+E++++ + D+LAR+GGDEF ++ + +++ +++ A+++Y F+++ Sbjct: 611 DKLLKEISTIFRQYVNGQDLLARIGGDEFCIIFRNQSLDEVTKRLDKLLLAISNYRFVYD 670 Query: 797 GRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAA 856 ++ VGAS G+ I+++ A ++ AD ACY +K+ GR R V+ H + Sbjct: 671 DKLFFVGASIGVIEINESTQSAEALIKAADNACYKAKHLGRNRYFVF-------HDNDSQ 723 Query: 857 MSLDEQWRMIKENQLM-MLAHGVAS---------------PRIPEARNL--WLISLKLWS 898 M++D+ ENQ++ L H + + P +A L + I L+L + Sbjct: 724 MAIDD-----SENQVLHALHHALQNDGFELYSQAIMPLNVPNQEKAAQLQHYEILLRLHA 778 Query: 899 CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGI--SISLPLSVAGLSS 956 + +I F L + +D V + + A +++ LS L Sbjct: 779 KDSGLISPGLFIPLAERHGLMNKVDMWVVENTLKTLERNPAHIDTVGKVAINLSGITLGD 838 Query: 957 ATLVNDLLEQLENSPLPP-RLLHLIIPAEAILDHAES---VQKLRLAGCRIVLSQVGRDL 1012 ++ + ++++++ +P ++ I A+ + + + + LR GC L G + Sbjct: 839 EMALHKIAKRMQSTSVPAEKICFEITETTAVTNLSAAKHFISTLRDLGCSFALDDFGAGM 898 Query: 1013 QIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMD 1072 F LK DY+ +DG N+ + +D +T I A +G +T+A VV + Sbjct: 899 SSFTYLKNLDVDYVKIDGSFVRNIVHDPIDHATVTAINNIAHSMGKQTVAEFVVDNATAE 958 Query: 1073 TLSGIGVDLIYGEVIADAQPL 1093 L + VD G + +PL Sbjct: 959 VLRELKVDFGQGFALDKPKPL 979 >UniRef50_A3JH23 Putative uncharacterized protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3JH23_9ALTE Length = 510 Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 113/377 (29%), Positives = 192/377 (50%), Gaps = 20/377 (5%) Query: 447 LKPNIFSW---DKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSP--- 500 + I +W D + EL I ++ NW V P+ Q A ++R L + + Sbjct: 119 FQKAIVAWQQTDPGLLELVAIGDALEMNWSV----AQPDLTQIA--LLRQQLTAANDGLQ 172 Query: 501 -FKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHI 559 F L+FR + + R A VL+ + L M +L ++ + + Sbjct: 173 IFSLQFREAMGNAAR----WAADVLSIVSIIFLLFLAFMAWQISARLTRSVRRSAQNFRA 228 Query: 560 TLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMEN-I 618 + + I+ + +N K+ G+++ + L + +LH ++G L + + Sbjct: 229 IFEQAAVGIAQINSEGNVLDVNETLSKILGYSKPQLLVMRYKDLLHPEDWESGRLQQQEV 288 Query: 619 YSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQL 678 S +T+ +Q L SGGS +++ ++V++DV+ES +M ++L Sbjct: 289 MSGNTNSYTFQQR--LMNSSGGSLWARLTVSIGHYQKTRTTNYIVVLEDVSESYRMSKEL 346 Query: 679 SYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDA 738 +Y A+HD LT L NR +FE+ L+ ++ + H HAL F+DLD+FK VND++GH AGD Sbjct: 347 NYQANHDELTGLINRRAFERHLKHVVSQAQTEHGAHALCFVDLDQFKIVNDTSGHLAGDE 406 Query: 739 LLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGR 798 LLR++A++ LR SDVLARLGGDEFG++L + +++A I ++ +A+ D F WEGR Sbjct: 407 LLRQVAAIARHSLRESDVLARLGGDEFGIILRNLTMDAAAGITEKLRAALEDMVFTWEGR 466 Query: 799 VHRVGASAGITLIDDNN 815 H V S G+ I + + Sbjct: 467 SHSVSCSIGVVPITNKD 483 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 76/133 (57%), Gaps = 1/133 (0%) Query: 295 KHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPE 354 + + S +FR E +A+G+A + +EG L N+ L + LGYS+ +L + ++ L PE Sbjct: 217 RSVRRSAQNFRAIFEQAAVGIAQINSEGNVLDVNETLSKILGYSKPQLLVMRYKDLLHPE 276 Query: 355 DLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDI 414 D Q ++++SG N+Y+ ++R N +G +WA L VS+ + +I +ED+ Sbjct: 277 DWESGRLQQQEVMSGNTNSYTFQQRLMNSSGGSLWARLTVSIGHYQKTRTTNYIVVLEDV 336 Query: 415 NELKR-TEQVNQQ 426 +E R ++++N Q Sbjct: 337 SESYRMSKELNYQ 349 >UniRef50_A0L4P1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L4P1_MAGSM Length = 809 Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 150/572 (26%), Positives = 253/572 (44%), Gaps = 31/572 (5%) Query: 540 MTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVP 599 M V + L EKER ITL SI + V+ D I N V + G +G Sbjct: 249 MRRVMGIESTLHYEKERAQITLISIADGVITTDTEGYIQDANKVVGALLGHKPASLIGKQ 308 Query: 600 LLTVLHITFGD--NGPLMENIYS--ADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLD 655 L V D + PL E++ + + + ++ VVL G + +++P+ + + Sbjct: 309 LEQVFPTRARDEESPPLHEDLKTLLSSATPQSMNTMVVLES-DGDDLLLDATLSPVQSSE 367 Query: 656 GSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHA 715 G +G+++ ++DVTE ++M ++ Y A HD LT L NR +F R ++ + + + H Sbjct: 368 GVVLGAIITVKDVTEQQRMSEKIRYQARHDHLTGLYNRHAFADLCRESMEAMKAD-EVHC 426 Query: 716 LVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE 775 L IDLDRFKA+ND+ GH AGD L+++++++ +R D AR+GGDEF + L DC+ Sbjct: 427 LCVIDLDRFKAINDTCGHKAGDMALKQISTMIQGCVRKYDYAARIGGDEFTIFLADCSQA 486 Query: 776 SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLID-----DNNHQAAEVMSQADIACY 830 + +++ V DY F+WEG+ +G S GI I + + QA AD A + Sbjct: 487 DGVKVMEKLLEQVQDYRFLWEGQQFNLGFSIGICEIHFQVPFEKSFQA------ADAAVF 540 Query: 831 ASKNGGRG--RVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHG-VASPRIPEAR 887 +K+ GR R E ++ + R++ L ++A V SP + + Sbjct: 541 QAKDDGRMCIRTRTVESNLLETPTKEETNWVGRLHRVLGVEPLALVAQRMVPSPSMQDHP 600 Query: 888 NLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA--VASKGISI 945 L+ I ++L E + +F A H L + ++ + A + S G Sbjct: 601 PLYEIFMRLPDGE-----KHHPPNAFLPTAERHGLTGDLDYKVLKMALDNLLLHSDGRIY 655 Query: 946 SLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQK----LRLAGC 1001 S+ LS L LL L P + + I ++++ E + ++ G Sbjct: 656 SINLSAKTLEDKASSAALLALLAAHPKRAKQICFEIDENTLINNMEVCSQFLFEVKQHGA 715 Query: 1002 RIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTI 1061 L G L L+ D L +DG+L + L +++ I + + + T+ Sbjct: 716 VTALDNYGGSLGNCLYLEQLGLDILKVDGQLVQQAKNKLSTRTVVSSIHNISHSMNILTV 775 Query: 1062 AGPVVLPLVMDTLSGIGVDLIYGEVIADAQPL 1093 A V + L IG D G A +PL Sbjct: 776 AKHVEDAELAAQLLTIGFDFQQGFYYAKPEPL 807 >UniRef50_C4KCC9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4KCC9_THASP Length = 748 Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 152/578 (26%), Positives = 253/578 (43%), Gaps = 40/578 (6%) Query: 540 MTEVKQLNEALFQEKERLHITL-DSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGV 598 + +L ++ ERLH L +S + + +D + + T++NP + + G+ + + Sbjct: 158 LERANKLMSQRLKDSERLHRYLVESSPDMIFTLDGSGRFTYINPRIKALLGYDRSALVKR 217 Query: 599 PLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRS-------GGSYDVHYSITPL 651 P T++ D ++ + S +S V L RS GGS V + P+ Sbjct: 218 PFTTLVMPEDLDR---IDTLLSQPSSLPGESFHVELRLRSRRDGGGEGGSVTVSLTGIPM 274 Query: 652 STLDGSN--IGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNS 709 T + IG V +D++E ++ +S+ A HD LTHL NR F+ +L + + Sbjct: 275 VTQENDRRVIGLYGVARDISERKRAEEIISFQAYHDQLTHLPNRVLFKDRLELAIAQAQR 334 Query: 710 THQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLL 769 A++FID+DRFK VND+ GHA GD LLR +AS + + LR D LARLGGDEF +LL Sbjct: 335 RTGALAVMFIDIDRFKLVNDTFGHAEGDLLLRAIASRLSATLRRGDTLARLGGDEFTVLL 394 Query: 770 PDCN-VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIA 828 PD N E A IA +++ A+ + +G R S GI L + A ++ AD A Sbjct: 395 PDINQPEDAEVIARKVLDALATPVRLSQGEF-RATVSVGIALFPRDGTTAEDLTRHADAA 453 Query: 829 CYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIK-------ENQLMMLAHGVASP 881 Y K G+ ++P+ H +R A+ D + + + + Q+ + G+ Sbjct: 454 MYQVKRSGKNAFRFFDPELNTRHRDRIALENDLRGAVARGELDLHYQPQVSLATRGI--- 510 Query: 882 RIPEARNLWLISLKLWSCEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAK--AV 938 + L +L W+ G I TF + + L + V Q A+ A Sbjct: 511 -------VGLEALLRWNHPGLGAIPPATFIQVAEEVGLISEISNWVLETACAQLARWQAE 563 Query: 939 ASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH----AESVQ 994 +S+ LS +V + L+ + P L + I ++D A V+ Sbjct: 564 GVGAPRVSINLSACDFQRGDVVGRIRACLDRHGVAPSCLEVEITEGLMMDDTADIAAKVR 623 Query: 995 KLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQ 1054 LR AG + + G L+ L +D +++G M +I+ I G A+ Sbjct: 624 ALREAGISVAIDDFGTGYSALAYLQRFPVSTLKIDRSFVRDLEGP-MTNPIISAITGIAR 682 Query: 1055 RLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQP 1092 + +A V D L +G +++ G + A P Sbjct: 683 GFDLDLVAEGVENLEQADALRALGCEVMQGYLFARPAP 720 >UniRef50_B4SPP4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=30 Tax=cellular organisms RepID=B4SPP4_STRM5 Length = 807 Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 130/454 (28%), Positives = 214/454 (47%), Gaps = 18/454 (3%) Query: 656 GSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHA 715 G + +I+DV+++ + R++ + ASHD LT L NR E+ L L V S H+ Sbjct: 341 GGGLSVFAIIEDVSQNHALAREIEHHASHDPLTGLINRREIERLLERSLLQVRSEGGTHS 400 Query: 716 LVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE 775 L +I+LD FK VNDS GHAAGD +LR A +++ +R D + RLG DEF + L + Sbjct: 401 LCYINLDHFKLVNDSFGHAAGDQMLRSFADYLVAAVRDGDWVGRLGADEFAVFLAHAGQD 460 Query: 776 SARFIATRIISAVNDYHF-IWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKN 834 A+ + R+I + F I EG + S G+ ++ A +MS AD ACYA+K Sbjct: 461 EAKRVLQRVIRNLGQATFPISEGSPQ-LSCSIGVVEVNAEAPDANWLMSAADSACYAAKQ 519 Query: 835 GGRGRVTVYEPQQAAAHSERA-AMSLDEQWRMIKENQLMMLAHGVASPRIPEARNL-WLI 892 GR RV + + A R A L + EN++++ A +A R+ + L + + Sbjct: 520 AGRNRVHCFNENRLALEERRQEAERLQGVSLAMAENRMLLYAQRIA--RVGDPSYLHYEV 577 Query: 893 SLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQ------AAKAVASKGISIS 946 +++ +G + F + ++ ALDR V F+ + + +++S Sbjct: 578 LVRMRGTDGSLHLPGQFMPAVERYGMAVALDRHVLGLLFRHLQVCPAHVRQLGLCNVNVS 637 Query: 947 LPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES---VQKLRLAGCRI 1003 S+A V DLLE+ N L +L I AI + +++ + ++ GCR+ Sbjct: 638 AQ-SIAEPGFLAFVCDLLER--NRALASKLCFEITETAAISNLSQARAFIDAVKARGCRM 694 Query: 1004 VLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAG 1063 L G L F L+ AD L +DG ++ + + + I + L M+ +A Sbjct: 695 ALDDFGSGLSSFGYLRQLPADILKIDGTFVRDMDTDPISHATVRAISELGRELQMEVVAE 754 Query: 1064 PVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 V V L+ +GV + G I QPL+ + Sbjct: 755 WVETAEVAAALTRLGVQGLQGYAIERPQPLERMT 788 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 4/122 (3%) Query: 295 KHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPE 354 K ++E E+ FR A + +GM + T+G+ ++ N+A+ L Y ++ L ++ L Sbjct: 238 KDLTEHESRFRAAFYQANVGMLKLDTDGKVMEANQAMADILDYRRDVLLQMSLGDLLMEG 297 Query: 355 DLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDI 414 +L D V + I + E R+ R+G +VW + + VR + G L A IED+ Sbjct: 298 ELVID--GVGR-IDWDRQLRPSELRFCRRDGSLVWGRWSGTGVR-SAGGGLSVFAIIEDV 353 Query: 415 NE 416 ++ Sbjct: 354 SQ 355 >UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YAT8_NITMU Length = 705 Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 152/569 (26%), Positives = 267/569 (46%), Gaps = 45/569 (7%) Query: 522 RVLNKEGEVERLLGINM-------DMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMA 574 R+ + + + L G NM ++TE ++ + K +L ++S +A++ D+ Sbjct: 118 RIFERYTKAKVLEGQNMVRVWSLRNITERREADAY----KAQLAAIVESSNDAIIVQDLN 173 Query: 575 MKITFMNPVAEKMSGWTQEEALGVPLLTVLHITF-GDNGPLMENIYSADTSRSAIEQDVV 633 IT N AE + G+ E +G + ++ + G +M I S R A + V Sbjct: 174 GIITSWNAGAEGLFGYRASEVIGSSVEILIPPDLREEEGDIMCLIKSG---RRADHFETV 230 Query: 634 LHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANR 693 + DV +I+ + G+ IG+ +++D+T+ ++ ++ Y A +D+LT L NR Sbjct: 231 RWGKGRKPIDVSVTISAMKDRAGNIIGASKIVRDITQRKESQERIEYLAHYDSLTGLPNR 290 Query: 694 ASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRS 753 +LRI ++ R AL+F+D+DRFK VNDS GH GD LL+ +A M S +R Sbjct: 291 TLLSDRLRIAIENARRYSIRLALLFVDIDRFKLVNDSLGHEIGDKLLKAVAQRMQSTVRQ 350 Query: 754 SDVLARLGGDEFGLLLP--DCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLI 811 +D ++R+GGDEF +LL + ++AR A ++I++++ + I E + + AS GI++ Sbjct: 351 ADTVSRVGGDEFVVLLSRIETATDAARS-AEKLITSISQPYQIEEHELL-LTASIGISIY 408 Query: 812 DDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQ--QAAA------HSERAAMSLDEQW 863 DN A+ + AD A Y++K GR R Y AAA H R A+S DE + Sbjct: 409 PDNGKDASSLTRNADAAMYSAKGQGRNRYQFYSEDLTYAAAERLRLEHDLRGALSRDEIF 468 Query: 864 RMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGE-IIDEQTFRRSFSDPALSHAL 922 + + + LA G R + + +L W+ G+ +I +F D L AL Sbjct: 469 PLYQPQ--IELATG---------RVIGVEALMRWNRAGQGLISPASFIPVAEDSGLILAL 517 Query: 923 DRRVFHEFFQQAAKAVASKGI--SISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLI 980 + + QA + +G +I++ +S + +L L + PP L L Sbjct: 518 GEYILRKACLQARQWHEHQGFQGTIAVNVSAVQFRQNDFTDVVLRVLSETGFPPECLELE 577 Query: 981 IPAEAILDHAES-VQK---LRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANV 1036 + ++ ES VQK L G ++ + G + L+ D L +D ++ Sbjct: 578 VTESVVMQGLESVVQKMGILESHGIKLAIDDFGTGYSSLSYLRQFAIDRLKIDQSFVRDL 637 Query: 1037 QGNLMDEMLITIIQGHAQRLGMKTIAGPV 1065 G+ + +I I + LG++ +A V Sbjct: 638 PGDADAQAIIRAIVAMGRSLGLRVMAEGV 666 >UniRef50_Q88QU8 Sensory box protein n=22 Tax=Gammaproteobacteria RepID=Q88QU8_PSEPK Length = 1247 Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 158/566 (27%), Positives = 267/566 (47%), Gaps = 36/566 (6%) Query: 320 TEGQWLQTNKALCQFLGYSQEELRGLTFQQLT-WPEDLNKDLQQVEKLISGEINTYSMEK 378 ++G L+ N+A + +G +++ G T L W + + L +E+L G I ++E Sbjct: 456 SDGCLLEVNEAFEEQIGLPPDQVIGRTATDLDLWGVEGSGPLL-LERLHQGGIR--NLEM 512 Query: 379 RYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAG 438 + NG + L + DGTP +A + DI++LK T+Q Q E+ A A Sbjct: 513 SFRRSNGQLFTGLTSAETF-ELDGTPALVVA-VRDISQLKETQQQLQTSEEKFAKAFHAS 570 Query: 439 GIGIWEWELKPNIFSWDKRMF---ELYEIPPHIKP---NWQVWYECVLPEDRQHAEKVIR 492 G+ + F Y++ P I + +W + L E ++ +++ R Sbjct: 571 PDGLLLSRQSDGLLLEVNEGFCRLTGYDLNPTIDQTSLDLGIWVD--LNERKRLVDQLNR 628 Query: 493 DSLQSRSPFKLEFRITVK--DGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEAL 550 D F +F ++ DG + L+ R L G V+ +L I D+TE L Sbjct: 629 DG------FVRDFTCHIRRSDGQIRLCELSARPLPITG-VDCMLTIARDITE-----RHL 676 Query: 551 FQEKERLHITL-DSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALG-VPLLTVLHITF 608 QEK +L T+ ++ E V+ D+ +I+ +N +++G+++ EALG P L + Sbjct: 677 MQEKLQLAATVFENTAEGVLITDIDQRISAVNRAFSEITGYSEIEALGQTPRLLA---SG 733 Query: 609 GDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDV 668 + ++ T+ + ++ ++G Y +I+ + D V V D+ Sbjct: 734 QHDSAFYLAMWHQLTAEGHWQGEIYNKRKNGELYPSWLTISAVRNSDREITHFVAVFADI 793 Query: 669 TESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVN 728 + + +L Y A HD LT L NR FE +L+ +L ++++ A++F+DLDRFK +N Sbjct: 794 SSIKHAQAKLDYQAHHDPLTGLPNRTLFENRLQGVLTCAQVSNRQGAVLFLDLDRFKHIN 853 Query: 729 DSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVES-ARFIATRIISA 787 DS GH GD LL+ +A + +R D +ARLGGDEF +LLP + S A IA ++++ Sbjct: 854 DSLGHPVGDLLLKGIAQRLKEQVRDVDTVARLGGDEFIILLPGLHKPSDASTIANKLLAC 913 Query: 788 VNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQ 847 N E AS GI+L + + ++ AD A Y SK GR RV Y Sbjct: 914 FNAPFQAGEHEFF-TSASIGISLYPQDGTDVSTLIRNADAAMYRSKAKGRNRVEAYTRDL 972 Query: 848 AAAHSERAAMSLDEQWRMIKENQLMM 873 A SER A+ E R ++ N++ + Sbjct: 973 TAQASERIALE-HELRRAVERNEMSL 997 >UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4VY11_9CYAN Length = 1393 Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 182/796 (22%), Positives = 338/796 (42%), Gaps = 53/796 (6%) Query: 328 NKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDV 387 N A GY+ +E+ G + P+ + ++ I + + + + Y ++G Sbjct: 608 NPAFESMTGYTAKEVIGHNCRFWQEPDYNQAGVTKLATAIQEQRECHVILQNY-RKDGST 666 Query: 388 VWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWEL 447 W L VS V DG +F+ DI + K+ E+ +Q E++ + +W L Sbjct: 667 FWNELYVSPVFDGDGYLTHFVGIQTDITKRKQAEEALRQSEEKLDSILRSLDDVVWSASL 726 Query: 448 KPNIFSW----DKRMF-----ELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSR 498 + F + +R++ + + P +W + P+DRQ E+ + + + Sbjct: 727 ENQQFIYLNPATERVYGRPVSDFVDCP-------SLWQFVIHPDDRQRVERA-SNRMMHQ 778 Query: 499 SPFKLEFRITVKDG-IRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERL 557 LE+R+ DG +R +R A + + G R+ GI DMT+ KQ AL + +E+ Sbjct: 779 GSKDLEYRVVRPDGEVRWLRDRARLIYDHRGIAIRMDGIATDMTKRKQAEAALLKSEEQF 838 Query: 558 HITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHIT-----FGDNG 612 +T + + + + +N G+T +E L + + H T F + Sbjct: 839 RLTFELAPIGMAMTSLEGQFLKVNQALCDALGYTAQELLALTFTEISHPTERALHFTQHQ 898 Query: 613 PLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESR 672 L++ S ++ + L +SG + + + G + + + D+++ + Sbjct: 899 SLLQG------ELSHLQTERRLISKSGRIVNAILKVVLVRDAQGQPLHYISQVVDISDRK 952 Query: 673 KMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQR----HALVFIDLDRFKAVN 728 +M QL + A HD LT L NRA F +L L+ QR A++ +DLDRFK +N Sbjct: 953 RMEEQLLHDAFHDVLTGLPNRALFMDRLEYALRRAG---QRWDYLCAVIVLDLDRFKVIN 1009 Query: 729 DSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARFIATRIISA 787 DS GH GD LL +A + LR SD LARLGGDEF +LL D N +A IA I Sbjct: 1010 DSLGHLVGDRLLSAIAERLQGCLRPSDTLARLGGDEFTILLDDIPNTAAATDIAKSIHQT 1069 Query: 788 VNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQ 847 + + F +G AS GI L H+A +++ AD A + +K G +++ Sbjct: 1070 L-ESSFNLDGYEVFATASIGIALSGMGYHRAEDLLRDADTAMHRAKLQGTACYVMFDTAM 1128 Query: 848 AAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWS-CEGEIIDE 906 + + + + +W I+ +L + + S + + +L W E +I Sbjct: 1129 SGRALAQLRLETELRW-AIERQELEVYYQPIIS--LGTGKITGFEALVRWQHPEQGMISP 1185 Query: 907 QTFRRSFSDPAL----SHALDRRVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLVND 962 F + L + R ++ Q + +++S+ LS S L+ Sbjct: 1186 GAFIPLAEETGLIIPIGQWVLRTSCYQLRQWQQQFPHYPPLTMSVNLSGKQFSQTNLIEQ 1245 Query: 963 LLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSL 1018 + + ++ + + P L L I I++H++S +++L+ ++ + G + L Sbjct: 1246 IAQIIQETEVNPSTLKLEITESGIMEHSDSASALLERLKALNIQLYIDDFGTGYSSLSRL 1305 Query: 1019 KANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIG 1078 D L +D + + + ++ I A LGM +A + + + L G Sbjct: 1306 HQFPIDALKIDRSFVSRMGDAGENGEIVQAIVTLAHNLGMDVVAEGIETNMQLAQLRGRR 1365 Query: 1079 VDLIYGEVIADAQPLD 1094 + YG+ ++PL+ Sbjct: 1366 CE--YGQGYFFSKPLN 1379 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 50/124 (40%), Positives = 79/124 (63%) Query: 299 ESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNK 358 +SE FR E + IGMA+ EGQ+L+ N+ALC LGY+ +EL LTF +++ P + Sbjct: 833 KSEEQFRLTFELAPIGMAMTSLEGQFLKVNQALCDALGYTAQELLALTFTEISHPTERAL 892 Query: 359 DLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELK 418 Q + L+ GE++ E+R +++G +V A+L V LVR G PL++I+Q+ DI++ K Sbjct: 893 HFTQHQSLLQGELSHLQTERRLISKSGRIVNAILKVVLVRDAQGQPLHYISQVVDISDRK 952 Query: 419 RTEQ 422 R E+ Sbjct: 953 RMEE 956 >UniRef50_Q47X88 Sensory box sensor/GGDEF/EAL domain protein n=2 Tax=Colwellia psychrerythraea 34H RepID=Q47X88_COLP3 Length = 1086 Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 156/593 (26%), Positives = 270/593 (45%), Gaps = 46/593 (7%) Query: 522 RVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMN 581 ++ N +GEV L+GI+ D+T +Q E L + I + EA++ D +I +N Sbjct: 493 KLKNAQGEVVGLIGISKDITNKRQQEEDL----KLADIVYQNSSEAMMITDSKNEIIAIN 548 Query: 582 PVAEKMSGWTQEEALGV-PLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGG 640 P +++G++ E +G P + + G P + + + Q + + + G Sbjct: 549 PALSEITGYSSSELIGKNPNV----FSSGKQNPEFYQLMWEEIKLTGTWQGEIWNTKKNG 604 Query: 641 S-YDVHYSITPLSTLDGSNIGSVLVIQDVTESRK----MLRQLSYSASHDALTHLANRAS 695 Y SI+ + G+ + + D+TE +K +LRQ A +D+LT+L NR Sbjct: 605 KEYPEWLSISTIYDDYGNVFRRIALFSDITEKKKKDALILRQ----AKYDSLTNLPNRIM 660 Query: 696 FEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSD 755 F +L ++ + +Q+ AL+FIDLD FK +ND+ GH GDALL E + +R D Sbjct: 661 FIDRLEQEIKVSHRKNQKFALIFIDLDNFKKINDTRGHVYGDALLIEAGKRITHCIREVD 720 Query: 756 VLARLGGDEFGLLLPD-CNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDN 814 +ARLGGDEF +LL D ++ + I +++ +++ FI + + + AS G+T+ ++ Sbjct: 721 TVARLGGDEFTILLSDIADIHNVESICQKVLQTLSEPFFISKMYTY-ISASLGVTIYPND 779 Query: 815 NHQAAEVMSQADIACYASKNGGRGRVTVYEP---QQAAAHSE-----RAAMSLDEQWRMI 866 E++ AD A Y +KN GR R + ++A H E R A+SL++ Sbjct: 780 ASSTLELLKNADQAMYLAKNLGRNRFCYFTASMQEEALDHLELINDLRKAISLNQLEVFY 839 Query: 867 KENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRV 926 + ++ L GV R EA W ++ E I + L + V Sbjct: 840 QP--IVELQTGVI--RKAEALLRWKHPVRGMVSPAEFIPLA------EESGLIIEIGDWV 889 Query: 927 FHEFFQQAAKAVASKGISISLPLSVAGLSSATLVN--DLLEQLENSPLPPRLLHLIIPAE 984 F + Q G+ I + ++ + + ++ D L L + LP + + I Sbjct: 890 FKQTVQHINTCKDQLGLDIQISVNKSPVQFRESIDQLDWLAYLAENQLPGENIVIEITEG 949 Query: 985 AILDHA----ESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNL 1040 ++++ E + K R AG + + G + LK DYL +D N+ Sbjct: 950 LLMNNNTSTMERLSKFRSAGIGLSMDDFGTGYSSLSYLKKFALDYLKIDQSFTRNIAPGS 1009 Query: 1041 MDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPL 1093 D +L I AQ+LG+K IA + M+ L G G D YG+ ++P+ Sbjct: 1010 EDMILSEAIITMAQKLGLKVIAEGIETKEQMELLIGAGCD--YGQGYYFSRPI 1060 >UniRef50_A6WTB4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=20 Tax=Shewanella RepID=A6WTB4_SHEB8 Length = 1497 Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 173/711 (24%), Positives = 299/711 (42%), Gaps = 73/711 (10%) Query: 414 INELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKR-----------MFELY 462 IN K+ Q + +R+ + +WEW F D R + L Sbjct: 801 INTFKQMNQALTESDDRLRQSLRGSDSDLWEWHKNTQAFHLDNRGAVLGTHANEIVVSLA 860 Query: 463 EIPPHIKPNWQVWYECVLPEDRQHA----EKVIRDSLQSRSPFKLEFRITVKDG------ 512 E+P H P+DR+ A + +I + F+ E+R KDG Sbjct: 861 ELPVH-------------PQDREKALAQWDSMISGEIDR---FEAEYRYQRKDGNWGWLR 904 Query: 513 IRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCID 572 +R N+ N E+ER+ GI D+T +QL + E L + E V+ +D Sbjct: 905 VRGRPVARNKHSN---EIERVAGIYSDITVQRQLED----EVNLLAKAFGNTSEGVLILD 957 Query: 573 MAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDV 632 + I N A+++ G + +G + + G + + + +D+ E+++ Sbjct: 958 VEGSIRVANYAAQQIIGIDSTDLVGQSFTQFVQMNDGLASEIKQLL--SDSQSWTGEREL 1015 Query: 633 VLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLAN 692 + S V +++ + + +G V+V D+TE ++ L A++D LT L N Sbjct: 1016 I--NASQQPCPVWLNVSVMQSANGKVTHYVVVFSDITERKQTEADLRRLANYDVLTGLPN 1073 Query: 693 RASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLR 752 R+ F +L +Q T ++ AL+F+DLDRFK VNDS GH+ GDALL E +S + S + Sbjct: 1074 RSLFSSRLLQSIQAAQQTGEKLALLFLDLDRFKHVNDSYGHSMGDALLVEASSRLQSCIA 1133 Query: 753 SSDVLARLGGDEFGLLLPDCN-VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLI 811 S +L R GGDEF +LL + N ++ IA R++ + F GR + S GI++ Sbjct: 1134 SEHMLCRFGGDEFVILLRNANSIDDINHIAERLLEQIV-APFKLYGREFYISTSIGISIW 1192 Query: 812 DDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQ---QAAAHSERAAMSLDEQWRMIKE 868 D+ Q + AD+A Y +K GRG Y + QA H + L+ R E Sbjct: 1193 PDDAVQPEAFIKNADLAMYHAKEEGRGNFQYYSSERNAQALYH-----LRLEADLRKAIE 1247 Query: 869 NQLMMLAHGVASPRIPEARNLWLISLKL---WS--CEGEIIDEQTFRRSFSDPALSHALD 923 Q L + P+I RN LI ++ W +G I F + L +D Sbjct: 1248 RQEFELYY---QPQIDILRNDKLIGMEALIRWKHPLDG-FIRPDIFIKVAEACGLIVDID 1303 Query: 924 RRVFHEFFQQAAKAVASKGISISLPLSVAGL--SSATLVNDLLEQLENSPLPPRLLHLII 981 R V + Q A G + L ++++ + + D+ L + +P L L I Sbjct: 1304 RWVLRQACVQGAHWAKRYGSTFKLSVNISAVHFRQPDFIEDIQSILHETQMPTASLGLEI 1363 Query: 982 PAEAILDH----AESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQ 1037 ++ + + +L+ G + + G L+ + L +D ++ Sbjct: 1364 TEGVLMKELHVAKDHLSRLKSLGIEVAIDDFGTGYSSLAYLRHFEVNTLKIDRSFLIDIA 1423 Query: 1038 GNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIA 1088 N D+ +++ I A+ L + +A + ++ + G +I G A Sbjct: 1424 TNKADQAIVSSIIELARNLKLNVVAEGIETVEQLEQVFSRGCYIIQGYYFA 1474 >UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WTL1_METML Length = 976 Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 125/447 (27%), Positives = 224/447 (50%), Gaps = 31/447 (6%) Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPH-IKP 470 E+I ELK +E R A E G G+W+W + + + KR E+ + + P Sbjct: 276 ENIEELKNSEF-------RWKFAIEGAGDGVWDWNIATDEAQYSKRWKEMLGYDENELLP 328 Query: 471 NWQVWYECVLPEDRQHAEKVIRDSLQSRSP-FKLEFRITVKDGIRHIRALANRVL---NK 526 Q W + V +D + ++ ++D L+ ++ + +E+R+ KD R+ L ++ + Sbjct: 329 TNQEWADRVHHDDVAYVKQTMQDYLEGKTALYVVEYRLKCKDN-RYKWILGRGMIVSRDD 387 Query: 527 EGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEK 586 +G R++G + D+TE K++ + L R+ T E +V + I +N Sbjct: 388 QGNPLRMIGTHTDITERKKIEQQL-----RIAATAFESQEGIVVTNENFNILRVNQAFID 442 Query: 587 MSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHY 646 ++G+ EEA G +L + +G NIY++ + +++ ++G Y H Sbjct: 443 ITGYEAEEATGKKP-NILK-SGRQSGEFYRNIYTSLRETGSWSGEIINRRKNGEIYPEHL 500 Query: 647 SITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQT 706 +IT + DG V + D++ ++ ++ A D LT+L NR F +L L Sbjct: 501 TITAVKDADGQTTNYVGMFTDISVAKAASERIENLAFFDPLTNLPNRRLFSDRLTQAL-- 558 Query: 707 VNSTHQRH--ALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDE 764 VNST + ALVF+DLD FK++ND+ GH GD LL+++A + + +R D +ARLGGDE Sbjct: 559 VNSTRSGNYGALVFLDLDHFKSLNDTLGHDYGDMLLKQVALRLSNCVREGDSVARLGGDE 618 Query: 765 FGLLLPDC---NVESA---RFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQA 818 F LL+ + +VE+A I +I+ ++N + + + S GI+L + + + Sbjct: 619 FVLLVENLSANDVEAAHQIEAIGDKILMSLNQ-PYQLQSHEYLSTPSIGISLFNGHQESS 677 Query: 819 AEVMSQADIACYASKNGGRGRVTVYEP 845 +++ ADIA Y +K GR + ++P Sbjct: 678 EDLLKHADIAMYQAKKAGRNTLRFFDP 704 >UniRef50_A6QA23 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QA23_SULNB Length = 703 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 176/694 (25%), Positives = 306/694 (44%), Gaps = 49/694 (7%) Query: 418 KRTEQVNQQLMERITLANEAGGIGIWEWELKPNIF----SWDKRMFELYEIPPHIKPNWQ 473 K+TE +++++ ER LA I +W++ + SW + + + P+ + W+ Sbjct: 5 KKTE-MDEKIKERFELALCGSKTSILDWDMVNHTLYISPSWKEMLGYREDELPNAESTWK 63 Query: 474 VWYECVLPEDRQHAEKVIRDSL-QSRSPFKLEFRITVKDGIRH---IRALANRVLNKEGE 529 + P D + + ++ + + R F+ R+ KDG H + A + ++ G Sbjct: 64 ---KLAYPRDIVNVMRSLKKHIREHRKVFENNHRLRHKDG--HWIWVLGRARIIYDEAGN 118 Query: 530 VERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSG 589 R++G + D+TE K+L Q+ + L+ I +AV+ +DM I N +E + Sbjct: 119 PIRMVGTHTDITEEKELQLKYSQQAQ----VLEQIHDAVILLDMDGFIRSWNKGSEILFE 174 Query: 590 WTQEEALGVPLLTVLHITFGDN-GPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSI 648 + +E +G I F DN E S + ++ L +SG +S Sbjct: 175 YRADEVIG----KNFSILFSDNITSAYEKWISELKENGEYKGEMFLQKKSGEPLYAVFSF 230 Query: 649 TPLSTLDGSNIGSVLVIQDVTESRK---MLRQ----LSYSASHDALTHLANRASFEKQLR 701 + L +G V +I D+TE +K +L++ L Y A HDALT L NR F +L Sbjct: 231 SLLKNQNGETTEVVSLIHDITEQKKAEAVLQEQKNILRYQAHHDALTRLPNRVLFFDRLE 290 Query: 702 ILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLG 761 ++ + + AL FIDLD+FK +NDS GH+ GD +LR A + +R D LARL Sbjct: 291 QSIRKTARSEKDFALFFIDLDKFKHINDSLGHSIGDRVLRVTAKRIKETIRQEDTLARLS 350 Query: 762 GDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAE 820 GDEF +++ D + E A +A +I+ + +I E ++ + S GI+L + Sbjct: 351 GDEFTVIMEDLGHPEDASVLAEKILLVLQKPMYIDEYTLY-ISGSIGISLYPQDAMDTES 409 Query: 821 VMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVAS 880 ++ AD A Y +K GR Y P+ ER AM + + KE + H Sbjct: 410 LLKYADTAMYKAKENGRNTFEFYAPEMTEYALERIAMKTSLKEAIEKEE---LCVH--YQ 464 Query: 881 PRIPEARNLWLISLKL---WSCEGE-IIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAK 936 P+I +AR +I ++ W ++ + F D L +D+ V +Q + Sbjct: 465 PQI-DARAECIIGVEALVRWQHPTRGLLHPEAFISLAEDTGLIVDIDKWVMRTAMKQVST 523 Query: 937 AVASKGIS--ISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAIL-DHAESV 993 +S ++L +S+ L + ++ L++ P+ L L IP ++ +H E++ Sbjct: 524 WHQEGLVSDVLALNISIKQLEGHNFMEEIAACLDDFDFKPKWLELEIPEGQVMKNHTETI 583 Query: 994 QKLR---LAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQ 1050 ++L+ + G I + G + LK + L +D + N D ++ I Sbjct: 584 ERLKELSVMGIGISIDDFGTGYSSLSLLKRLPINRLKIDKSFIEFI-PNEEDVAIVKAII 642 Query: 1051 GHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYG 1084 A L + IA V D L G I G Sbjct: 643 ALANSLKLDVIAEGVETDDQKDFLVENGCTKIQG 676 >UniRef50_Q21V50 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21V50_RHOFD Length = 678 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 131/443 (29%), Positives = 219/443 (49%), Gaps = 23/443 (5%) Query: 411 IEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP-HIK 469 IE E KR + ER A E G G+W+ L+ + KR E+Y ++ Sbjct: 240 IEQNQERKRAQHALALSEERWKFALEGAGDGVWDRNLQTGEVVFSKRYKEIYGFAADELE 299 Query: 470 PNWQVWYECVLPED--RQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVL--- 524 + + W V P+D R A++ + + +S + E R+ KDG + + +R + Sbjct: 300 NHTEAWDARVHPDDLARIEADRAAYFAGE-KSSYANERRMQCKDG--SWKWILSRGMVVA 356 Query: 525 -NKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLD-SIGEAVVCIDMAMKITFMNP 582 + +G+ R++G + D+T + EAL RL T+ ++ EAV +M +I +NP Sbjct: 357 RDAQGQPLRMIGTHTDITARHEREEAL-----RLASTVILTMDEAVTVTNMRNEIISVNP 411 Query: 583 VAEKMSGWTQEEALGV-PLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGS 641 ++G+ E +G P L + + +++++ + ++ +SG Sbjct: 412 AFTVITGYFASEVIGRNPKLMA---SGTHSATFYQDMWAKLATTGNWHGEICNRRKSGKL 468 Query: 642 YDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLR 701 Y SI + G V V D++E + ++ + A D LT+L NRA F +LR Sbjct: 469 YVEWLSIKQVRDEQGVPSHYVAVFSDISERKASEVRMQHLAHFDVLTNLPNRALFSDRLR 528 Query: 702 ILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSML-RSSDVLARL 760 + + AL+F+DLDRFK VND GH GD LL+E+A +L + R SD +AR+ Sbjct: 529 QAIAKARRDKTQLALMFMDLDRFKPVNDQLGHQVGDLLLQEVARRLLDCVRRESDTVARI 588 Query: 761 GGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAA 819 GGDEF ++LPD V++A +A +I++A+N I E R+H + +S GI + ++ Sbjct: 589 GGDEFVVMLPDLETVQAATLVAEKILAALNLVFEIGEHRIH-ISSSIGIAIFPEHGQDEN 647 Query: 820 EVMSQADIACYASKNGGRGRVTV 842 ++ AD A Y +K GR RV V Sbjct: 648 HLLKSADAAMYLAKENGRNRVQV 670 >UniRef50_C6E953 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=C6E953_GEOSM Length = 953 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 110/345 (31%), Positives = 176/345 (51%), Gaps = 16/345 (4%) Query: 495 LQSRSPFK-LEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQE 553 L+ R + +E R+ ++G R + L + L + LL + D++E K+L E + Sbjct: 342 LEERGEVRDIEVRLKGRNG-RELEGLVSAELIEINGNPYLLTLFKDISERKRLEE----D 396 Query: 554 KERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGP 613 + RL ++S +A++ +D IT N AEKM G+ ++ GV H++F + Sbjct: 397 RARLAAIVESSDDAIMAVDREGAITSWNAGAEKMFGYCAQDMKGV------HLSFLVSPE 450 Query: 614 LMENIYSADT---SRSAIEQDVVLHCRSGGSY-DVHYSITPLSTLDGSNIGSVLVIQDVT 669 E + + S A+ V+H GGS V +++P+ + DG +G+ + +DVT Sbjct: 451 KKEQVTCLNDGIRSDGAVTHCEVVHVTRGGSQIYVSLTMSPIKSADGGIVGTSCIARDVT 510 Query: 670 ESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVND 729 E +M + + A HD LT L NR F L + L + A++F+DLD FK VND Sbjct: 511 ERTRMEEIIKHQAQHDTLTDLPNRKLFGDFLNLELAQARRNRKSLAVLFMDLDHFKKVND 570 Query: 730 SAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVN 789 S GHAAGD LL+ +A + +R SD +AR+ GDEF +L+PD I I V Sbjct: 571 SLGHAAGDRLLQAVAQRLKRCVRESDTVARISGDEFNVLMPDLTQTDDVGIVVGKIMGVF 630 Query: 790 DYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKN 834 F+ EG +V S G+++ D+ A E++ +AD A Y +K Sbjct: 631 RTPFVLEGAELKVTTSVGVSMFPDDGDSAQELLQKADGAMYVAKQ 675 Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust. Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 11/149 (7%) Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPH-IKP 470 E + ++R EQ Q ERIT +G WEW L+ W ++ + + P + Sbjct: 139 EQVERIRRREQQLSQ-AERIT------HLGSWEWNLESGETVWSDELYRILGLEPESVAA 191 Query: 471 NWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLE-FRITVKDG-IRHIRALANRVLNKEG 528 ++ V P DR+ EK ++ ++ S ++ +R+ DG R +R V + G Sbjct: 192 TFESLLRMVHPADRETMEKAVQQLRETGSALGIQYYRLLRADGETRIVRGQLESVRDGSG 251 Query: 529 EVERLLGINMDMTEVKQLNEALFQEKERL 557 + ++G D+TE+K AL + R Sbjct: 252 R-QTVIGACHDVTELKWAEAALRASERRF 279 Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust. Identities = 41/145 (28%), Positives = 74/145 (51%), Gaps = 16/145 (11%) Query: 321 EGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKD---LQQVEKLISGEINTYSME 377 +G L+ N+A + LGY ++E+ G +L D ++ LQQ+E+ GE+ +E Sbjct: 297 DGTILEVNEAFLRVLGYQRQEVIGTYAGELGLWADSDQPAALLQQLEE--RGEVR--DIE 352 Query: 378 KRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEA 437 R RNG + L++ L+ +G P Y + +DI+E KR E+ +L + +++A Sbjct: 353 VRLKGRNGRELEGLVSAELI-EINGNP-YLLTLFKDISERKRLEEDRARLAAIVESSDDA 410 Query: 438 GGIGIWEWELKPNIFSWD---KRMF 459 I + + I SW+ ++MF Sbjct: 411 ----IMAVDREGAITSWNAGAEKMF 431 >UniRef50_UPI0001C31434 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31434 Length = 769 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 154/551 (27%), Positives = 261/551 (47%), Gaps = 25/551 (4%) Query: 567 AVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGD-NGPLMENIYSADTSR 625 + D+ + +N +++G+T+ E L + + H D ++ + + Sbjct: 218 GIALADLDGRFLRVNDALCEITGYTEAELLAANVDLLGHSDAADAEAEHVDRLMRGEIRS 277 Query: 626 SAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHD 685 +E+ +V H +G S V S++ + G + ++D+++ ++ QL+Y A HD Sbjct: 278 YRLERRIV-HA-TGRSVWVSLSVSLVRDSSGVPRYCIKQLEDISDRKRFEGQLAYLADHD 335 Query: 686 ALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELAS 745 ALT L NR +F+++L Q + + A+V IDLD FK +ND+ GHAAGD ++ +A Sbjct: 336 ALTGLYNRRAFQRELE---QRTSEDGRGGAVVVIDLDHFKDINDTLGHAAGDEVIVRVAR 392 Query: 746 LMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVG-- 803 L+ LR +DVL RLGGDEF LL + E A + ++ V + + EG H +G Sbjct: 393 LLAKRLRKTDVLGRLGGDEFATLLSGVSREEAEAVIAELLRVVREQSVVVEGG-HPIGLT 451 Query: 804 ASAGITLID-DNNHQAAEVMSQADIACYASKNGGRGR--VTVYEPQQAAAHSERAAMSLD 860 ASAGI L + D E++ ADIA Y +K GR R ++V Q+ A +ER M+ Sbjct: 452 ASAGIALFEGDTPLSGEELLVSADIAMYDAKEAGRDRHAISVETEQRQAQMTER--MAWS 509 Query: 861 EQWR-MIKENQLMMLAHGVASPR--IPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPA 917 ++ R ++ + ++ V R +P+ L L++ +GE+I F Sbjct: 510 QRMRDALEHDGFVLFQQPVVDLRTGLPKCHELL---LRMRGDDGELIPPAAFLPIAERSG 566 Query: 918 LSHALDRRVFHEFFQQ-AAKAVASKGISISLPLSVAGLSSATLVNDLLEQLEN-SPLPPR 975 L +DR V AA+ A + + +++ LS A +S L+ + L +P P Sbjct: 567 LIAEIDRWVTRRAIATIAAQEAAGRPLRLAVNLSGASVSDPGLLEIIEGDLAAMAPPPGS 626 Query: 976 LLHLIIPAEAI--LDHAES-VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGEL 1032 L+ + AI LD A + L GC + L G F LK DYL +DG+ Sbjct: 627 LVFEVTETAAIVNLDRARAFAATLAELGCELALDDFGAGFGSFYYLKRLPFDYLKIDGDF 686 Query: 1033 CANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQP 1092 + + D++++ I A+ LG +T+A V ++ L + VD G + P Sbjct: 687 IRQLTSSHEDQLVVRAIVEIARGLGKRTVAEFVGDEATLELLRELRVDDGQGFHLGRPAP 746 Query: 1093 LDLLVNSSYFA 1103 L+ L+ + A Sbjct: 747 LEDLIAAQNAA 757 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 47/118 (39%), Positives = 72/118 (61%) Query: 304 FRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQV 363 FR A E + IG+AL +G++L+ N ALC+ GY++ EL L + + + + V Sbjct: 208 FRLAFEGAPIGIALADLDGRFLRVNDALCEITGYTEAELLAANVDLLGHSDAADAEAEHV 267 Query: 364 EKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTE 421 ++L+ GEI +Y +E+R + G VW L+VSLVR + G P Y I Q+EDI++ KR E Sbjct: 268 DRLMRGEIRSYRLERRIVHATGRSVWVSLSVSLVRDSSGVPRYCIKQLEDISDRKRFE 325 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 63/226 (27%), Positives = 109/226 (48%), Gaps = 6/226 (2%) Query: 290 FRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQ 349 RA + + ++ FR A E + IG+AL +G++ + N+A C+ +G + ++ G++ Sbjct: 67 LRAGQDALQHAQEQFRTAFEDAPIGIALFTVDGRFTEVNRAFCEMVGAERGQIVGISVLD 126 Query: 350 LTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIA 409 P D L L++GE T+ E+R +G VW L SLVR G PL+FI Sbjct: 127 HVAPADRPDSLAAFRALVAGERTTFHAEQRLRRADGREVWCALRASLVRDGAGEPLHFIV 186 Query: 410 QIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFEL--YEIPPH 467 QIED++ +R + + ER LA E IGI +L + + E+ Y Sbjct: 187 QIEDVSARRRAAEALAEAEERFRLAFEGAPIGIALADLDGRFLRVNDALCEITGYTEAEL 246 Query: 468 IKPNWQ-VWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG 512 + N + + + +H ++++R ++S ++LE RI G Sbjct: 247 LAANVDLLGHSDAADAEAEHVDRLMRGEIRS---YRLERRIVHATG 289 >UniRef50_A4BB01 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BB01_9GAMM Length = 699 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 158/597 (26%), Positives = 269/597 (45%), Gaps = 37/597 (6%) Query: 522 RVLNKEGEVERLLG-INMDMTEVKQLNEALFQEKER-LH-------ITLDSIGEAVVCID 572 R LN EG V+ ++ +N + E + + +E+E LH ITLDSIG+AV+ D Sbjct: 104 RCLN-EGAVDFIIKPLNPKIVEARVRTQLKLKERETTLHNLYRHAAITLDSIGDAVISTD 162 Query: 573 MAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMEN---IYSADTSRSAIE 629 ++ +MNP AE ++G T EA G + ++ + G +GP N + ++ + Sbjct: 163 KDGRVRYMNPAAELITGHTNIEAQGRFIEDIMPLRIGHDGPAHVNPLRLAISEKRNVGMA 222 Query: 630 QDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTH 689 + L + G V S +PL + G IG V+V +D+ ESR M+ ++++S HD LT+ Sbjct: 223 FNCQLRNQRGKWISVEDSASPLISDSGDVIGGVIVFKDIDESRAMVLKMTHSLQHDQLTN 282 Query: 690 LANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLS 749 L NR + L + T + L+ +++DRFK +N+ G A GD+LL+++A+ + Sbjct: 283 LPNRFLLMEHLTAAIATNKGQQTKLGLLQLNIDRFKLINEEFGFAFGDSLLKKVANFLKQ 342 Query: 750 MLRSSDVLARLGGDEFGLLLPDCNVESA-RFIATRIISAVNDYHFIWEGRVHRVGASAGI 808 L + L+R DEF +L+P N S +A ++ + + G V+ + A G+ Sbjct: 343 QLSGEETLSRHNADEFVILVPKLNDTSELANLALQLKEQLGLFSQTLSGIVN-LTACIGL 401 Query: 809 TLIDDNNHQAAEVMSQADIACY-ASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIK 867 +L D+ A ++ AD A A +N + Y + A R + ++ IK Sbjct: 402 SLYPDDARDAQSLILHADSALKRAKENAIHQGICFYSDEMATQFMTRRKI-----YKHIK 456 Query: 868 ---ENQLMMLAH----GVASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSH 920 NQ ++ + S R+ L IS EG I+ F D L Sbjct: 457 AAVSNQSVITLYQPMVNSQSGRVEAVEALMRIS----DDEGNIVPPIDFIAIAEDTRLIL 512 Query: 921 AL-DRRVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHL 979 L ++ + + QQ A + I I L +S V L + L+ + PR++ L Sbjct: 513 PLGEQMIVNSLKQQQKWQKAGRNIRICLNISPVQFREPGFVGFLTQTLQTMQIDPRMIEL 572 Query: 980 IIPAEAILD-HAE---SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCAN 1035 + +L+ HA+ +Q LR G + + G + LK D L +D A Sbjct: 573 EVTESLMLETHAQLTRDIQTLRDMGITLSIDDFGTGYSSLSYLKDLPVDVLKIDKSFVAL 632 Query: 1036 VQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQP 1092 + D +LI I A +G+ ++A V + L +G+ L+ G + QP Sbjct: 633 AETTEGDTVLIKTIAELANNMGLSSVAEGVETEQQVHYLQNLGISLLQGYYFSKPQP 689 >UniRef50_Q31P31 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=Chroococcales RepID=Q31P31_SYNE7 Length = 1047 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 175/666 (26%), Positives = 304/666 (45%), Gaps = 58/666 (8%) Query: 460 ELYEIPPHIK-PNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIR 517 E+Y I P N V + + PED ++ + I S Q+ +K+E+RI K+G ++ ++ Sbjct: 398 EVYGIDPETALENSNVVWGMIHPEDIEYLKTSIIKSQQTLKTWKVEYRIITKNGELKWMQ 457 Query: 518 ALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKI 577 A + GE G+ +D+++ K++ L +ER + +++ + +VC+ A Sbjct: 458 GRARPTRQENGET-FWDGLIIDISDRKKIEAELQTSEERYRLLAENMND-LVCLHQADGT 515 Query: 578 T-FMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAI----EQDV 632 +++P AE + G++ EE +G H D D + A+ E + Sbjct: 516 YLYVSPSAEALLGFSSEEMVGQNPYDFFHPEDCDR--------IRDEAHQAVLMGAELPI 567 Query: 633 VLHCRSG-GSYDVHYSIT-PLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHL 690 V R G Y ++T P+ G IG +DVT+ ++ QL Y A HD+LT L Sbjct: 568 VYRMRKKLGGYIWFETLTKPIMDDQGVVIGLQTTSRDVTQRIEIQNQLQYDACHDSLTGL 627 Query: 691 ANRASFEKQLRILLQTVNS-THQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLS 749 ANR ++L + L+ + ++A++F+DLDRFK +NDS GH GD LL +A + S Sbjct: 628 ANRNLLIERLELSLKRSKRLQNYKYAVLFLDLDRFKVINDSLGHITGDQLLVSIAQKLQS 687 Query: 750 MLRSSDVLARLGGDEFGLLLPDCNV-ESARFIATRIISAVNDYHFIWEGRVHRVGASAGI 808 ++RS D+ ARLGGDEF +L+ D + +A RI++A+ E R S GI Sbjct: 688 IIRSHDLAARLGGDEFVVLVEDIQTFDEPIKVAERILAAIQ-VPLELEERSIYTSTSIGI 746 Query: 809 TLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSER-AAMSLDEQWRMIK 867 A +++ AD A Y +K+ GR R V++ +A HS+ A + L+ R Sbjct: 747 VFGSHEYESATQLLRDADTAMYRAKSRGRARYEVFD---SAMHSQALARLHLENDLRQAI 803 Query: 868 ENQLMMLAHGVASP--RIPEARNLWLISLKLWSCEGEIID---------EQTFRRSFSDP 916 Q +L + P ++ + +L W E I E+T Sbjct: 804 ARQEFVLYY---QPIIQLQTGKITGFEALIRWQHPTEGIKLPIDLIPIAEET-------- 852 Query: 917 ALSHALDRRVFHEFFQQAAKAVAS----KGISISLPLSVAGLSSATLVNDLLEQLENSPL 972 L ++D V ++ +Q ++ AS +S+S+ LS L L++++ L+ + + Sbjct: 853 GLITSIDYWVLNQACRQLSEWQASYSQAADLSMSVNLSAQNLQHDHLMDEIQSVLQATKI 912 Query: 973 PPRLLHLIIPAEAILDHAESVQKLRLA----GCRIVLSQVGRDLQIFNSLKANMADYLLL 1028 P L L I ++++ + +L A G I + G + L + L + Sbjct: 913 KPGSLTLEITESMLIENTDQTIQLLAAINEQGIEISIDDFGTGYSSLSYLHKLPVNNLKV 972 Query: 1029 DGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIA 1088 DG + + ++ I +LG+K IA + +D LS +G YG+ Sbjct: 973 DGSFVRKITTESTNYQIVNTIIALNNQLGLKAIAEGIETHEQLDLLSQLGYQ--YGQGYL 1030 Query: 1089 DAQPLD 1094 A+PL+ Sbjct: 1031 FARPLN 1036 >UniRef50_C0N3Y7 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N3Y7_9GAMM Length = 1123 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 146/551 (26%), Positives = 249/551 (45%), Gaps = 20/551 (3%) Query: 559 ITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALG-VPLLTVLHITFGDNGPLMEN 617 + +S EA++ D + KI +N ++G+ E +G P V +T D L E+ Sbjct: 561 VAFNSTSEAMMITDKSKKIIVVNSAFSDITGYDGTEVIGRYPSFLVSGLTKSDFQQLSES 620 Query: 618 IYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQ 677 +A + ++ + + + S++ + DG+ V V D++E ++ + Sbjct: 621 FAAAMKAYGIWRGEIQCRHKDKTMFPAYVSMSAVYDTDGNICNMVGVFSDISEVKEAQAK 680 Query: 678 LSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGD 737 + A++D LT L NR F +L+ + +++ L+F+DLDRFK VND+ GH GD Sbjct: 681 IERHANYDILTDLPNRRLFTDRLQQAILRCGRHNEKLCLMFLDLDRFKDVNDTLGHEFGD 740 Query: 738 ALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVES-ARFIATRIISAVNDYHFIWE 796 LL+++A + + +R D +ARLGGDEF ++L + + +S A IA ++IS + + E Sbjct: 741 QLLKQMAVRIQACVREVDTVARLGGDEFTIILSEFDGKSHAVNIAQKLISEIEKPITVQE 800 Query: 797 GRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAA 856 + RV S GIT D+ + ++ AD A YA+K+ G Y + + R Sbjct: 801 -QTLRVTTSVGITFYPDDAIDSGMLIQNADRAMYAAKDMGGSAFKFYTTELELSWLSRTF 859 Query: 857 MSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLIS---LKLWS-CEGEIIDEQTFRRS 912 + L+E I++ ++ + P IP S L W E +I F Sbjct: 860 I-LNELEAAIEKGEIEVYYQ----PLIPANTETACQSAEALVRWQHPERGLISPADFLPQ 914 Query: 913 FSDPALSHALDRRVFHEFFQQAAKAVASKGIS---ISLPLSVAGLSSATLVNDLLEQLEN 969 + +D VF + QQ K + GI +S+ S + D L + Sbjct: 915 AERMGMIEKIDDFVFSQVCQQ-IKTWQANGIGDVHVSVNRSAHNFGNQRGRLDWLAYIRE 973 Query: 970 SPLPPRLLHLIIPAEAIL-DHAES---VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADY 1025 + L+ L I ++ HAES ++KLR AG +I + G + LK DY Sbjct: 974 QGINAGLITLEITESVLMRRHAESGHLLKKLRQAGVQIAVDDFGTGYSSLSYLKEMDIDY 1033 Query: 1026 LLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGE 1085 L +D +++ + D +I I G A+ LG++ IA V + L IG + G Sbjct: 1034 LKIDRSFIRDLEADDNDRAIIEAITGMARHLGIEVIAEGVETLSQKEILEKIGCHWLQGY 1093 Query: 1086 VIADAQPLDLL 1096 A P+D+ Sbjct: 1094 FFAKPMPVDVF 1104 >UniRef50_A9VWI8 Diguanylate cyclase n=2 Tax=Methylobacterium extorquens group RepID=A9VWI8_METEP Length = 1428 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 183/751 (24%), Positives = 317/751 (42%), Gaps = 68/751 (9%) Query: 375 SMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLA 434 S E R R+G W L ++ G ++ DI+E ++ + + ER LA Sbjct: 690 SFEFRALCRDGAYRWTLTRAVPLKDASGQVQEWVGTDGDIHESRQASEAIRLQEERYRLA 749 Query: 435 NEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYEC-VLPEDRQHAEKVIRD 493 A IW+W+L + W + L+ + + W++ + P+DR+ I+ Sbjct: 750 MLATQDAIWDWDLGADTAEWSDGAYRLFGYDDAERADTGAWWKSKIHPDDRERVTTSIKH 809 Query: 494 SLQSRS-PFKLEFRITVKDG-IRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALF 551 ++S+ + E+R DG + + + EG+ R++G D++E ++ N AL Sbjct: 810 IIESQEHRWSDEYRFARADGSYAEVTDCGFVIRDTEGQALRMVGALRDISEQRRANAALR 869 Query: 552 QEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPL-----LTVLHI 606 +ERL + L A +M W ++ G+ L +L I Sbjct: 870 ASEERLRLALQ---------------------AGRMVAWERDLKTGLATRSDNALQLLGI 908 Query: 607 TFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYS-ITPLS-----TLDGSNI- 659 G L++N++ D R+ +E+ G V + + P T+ + Sbjct: 909 GSGPISLLLDNVHPED--RAHVER---FTAYGGALSTVEFRYLHPAGPQIWLTMRAERVE 963 Query: 660 -GSVLVIQ-DVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALV 717 G ++ I D+TE + Q +A+HDALT L NR F ++L L L+ Sbjct: 964 AGRIVGITFDITERKLSEEQAWRAANHDALTGLPNRRLFHQRLEQALAAAERGGTSVTLL 1023 Query: 718 FIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD-CNVES 776 +DLD + VND GH AGDA+LRE++S ++ LR+SD +ARLGGDEF LLL + +E Sbjct: 1024 LVDLDTLRDVNDIHGHDAGDAVLREVSSRLVEGLRASDTVARLGGDEFALLLTEPLRLEH 1083 Query: 777 ARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGG 836 A A ++ + ++ G AS G+ D++ +++ ADIA Y +K G Sbjct: 1084 AAKHAEVLLERLRQ-PLVYRGHRLTCTASIGLAAYPDHHRNPYDLLKDADIALYRAKAQG 1142 Query: 837 RGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRI--PEARNLWLISL 894 R V+ + + +ER + E + Q++ P+I + +L Sbjct: 1143 RNSAVVFAAEM-RSQTERRVLIAAEVRTAVAAGQIVPYYQ----PKICFTTGAIVGFEAL 1197 Query: 895 KLWS-CEGEIIDEQTFRRSFSDPALSHALD----RRVFHEFFQQAAKAVASKGISISLPL 949 W E ++ F +F +P L+ A+ R+V + Q + ++++ Sbjct: 1198 ARWQHPEKGLLTPGYFGSAFENPELATAIGSSLIRQVAADLGQWCRCGLDPGRVAVN--F 1255 Query: 950 SVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESV-----QKLRLAGCRIV 1004 S A L D+L L +PP + + L H V ++L G I Sbjct: 1256 SSAEFRRPDLAGDILSVLSEHDVPPARFEVEVTETVFLGHGTEVVPATLRRLHDNGILIT 1315 Query: 1005 LSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGP 1064 L G LK ++ +D NV + D +IT + G + LGM+ A Sbjct: 1316 LDDFGTGFASLTHLKQFPVGHIKVDQSFVRNVVQDQGDAAIITAVIGLGRSLGMQVTAEG 1375 Query: 1065 VVLPLVMDTLSGIGVD----LIYGEVIADAQ 1091 V + + LS +G D +YG+ +A ++ Sbjct: 1376 VETVVQANRLSAMGCDYAQGYLYGKPMAGSR 1406 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 88/294 (29%), Positives = 147/294 (50%), Gaps = 10/294 (3%) Query: 562 DSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGV-PLLTVLHITFGDNGPLMENIYS 620 D+ + ++ D+ +++P ++ G+ E LG PL +V L++ + + Sbjct: 177 DNSSDLIIRSDLDGTRRYVSPAVSRLLGYEARELLGTHPLASVHPDEASSYAQLLKQLEA 236 Query: 621 ADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSY 680 S + +Q S ++ +S+T G N G V +I+D+++ + + +++ Sbjct: 237 GQISEAVTQQRYRRRDSSFVWVEISFSLTREEETGGPN-GYVAIIRDISQRKAVESEMAR 295 Query: 681 SASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALL 740 A HD LT L NR F +QL + T AL+ +DLDRFK VND+ GH AGD LL Sbjct: 296 IARHDPLTGLPNRLHFREQLEQEIARTKRTSSTFALLCLDLDRFKLVNDTLGHQAGDRLL 355 Query: 741 RELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARFIATRIISAV---NDYHFIWE 796 + +A + S+LR+ D LARLGGDEF ++ +C E A +A R+I+A+ D Sbjct: 356 KVVAQRIKSVLRTEDTLARLGGDEFVIIQTNCARAEDASRLAERVIAAMLPPVDLGGYPA 415 Query: 797 GRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAA 850 G VG S GI L ++ + + AD A Y +K GR ++ ++ + Sbjct: 416 G----VGVSIGIALAPQDSLDHDHLYALADQALYRAKAAGRNTFRLFAEEEVGS 465 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 14/215 (6%) Query: 333 QFLGYSQEEL--RGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWA 390 + GY E G ++ P+D + ++ +I + + +S E R+ +G Sbjct: 775 RLFGYDDAERADTGAWWKSKIHPDDRERVTTSIKHIIESQEHRWSDEYRFARADGSYAEV 834 Query: 391 LLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPN 450 ++R T+G L + + DI+E +R + ER+ LA +AG + WE +LK Sbjct: 835 TDCGFVIRDTEGQALRMVGALRDISEQRRANAALRASEERLRLALQAGRMVAWERDLKTG 894 Query: 451 IFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVK 510 + + +L I + + V PEDR H E+ + + +EFR Sbjct: 895 LATRSDNALQLLGIG---SGPISLLLDNVHPEDRAHVERF---TAYGGALSTVEFRYLHP 948 Query: 511 DGIR-HIRALANRVLNKEGEVERLLGINMDMTEVK 544 G + + A RV E R++GI D+TE K Sbjct: 949 AGPQIWLTMRAERV-----EAGRIVGITFDITERK 978 Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 71/329 (21%), Positives = 127/329 (38%), Gaps = 5/329 (1%) Query: 381 YNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGI 440 + G W +A+S V+ G +A D+ E+ Q R EA Sbjct: 571 HTAKGRPRWWDVALSPVKTLSGARGLILAISRDVTVQVELERDLQTTANRYKALIEASAT 630 Query: 441 GIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSP 500 +W P+ + + Y P W + V P+DRQ R+ S++ Sbjct: 631 MVWR--ATPDGSLVESSGWGTYTGQPESAYIGYGWLDTVHPDDRQRVTTTWREIFASQAA 688 Query: 501 FKLEFRITVKDG-IRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHI 559 EFR +DG R A + + G+V+ +G + D+ E +Q +EA+ ++ER + Sbjct: 689 GSFEFRALCRDGAYRWTLTRAVPLKDASGQVQEWVGTDGDIHESRQASEAIRLQEERYRL 748 Query: 560 TLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIY 619 + + +A+ D+ + A ++ G+ E I D + +I Sbjct: 749 AMLATQDAIWDWDLGADTAEWSDGAYRLFGYDDAERADTGAWWKSKIHPDDRERVTTSIK 808 Query: 620 SADTSRSAIEQDVVLHCRSGGSY-DVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQL 678 S+ D R+ GSY +V + +G + V ++D++E R+ L Sbjct: 809 HIIESQEHRWSDEYRFARADGSYAEVTDCGFVIRDTEGQALRMVGALRDISEQRRANAAL 868 Query: 679 SYSASHDALTHLANR-ASFEKQLRILLQT 706 S L A R ++E+ L+ L T Sbjct: 869 RASEERLRLALQAGRMVAWERDLKTGLAT 897 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 7/163 (4%) Query: 260 PRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVG 319 PR++ L L A I+ + +AERK ES +R + S+ + Sbjct: 134 PRSFSAEQQEQLRDL-----AQIVVAQLRLSKAERK-ARESADDYRLLADNSSDLIIRSD 187 Query: 320 TEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKR 379 +G + A+ + LGY EL G P++ + Q +++L +G+I+ ++R Sbjct: 188 LDGTRRYVSPAVSRLLGYEARELLGTHPLASVHPDEASSYAQLLKQLEAGQISEAVTQQR 247 Query: 380 YYNRNGDVVWALLAVSLVRHTD-GTPLYFIAQIEDINELKRTE 421 Y R+ VW ++ SL R + G P ++A I DI++ K E Sbjct: 248 YRRRDSSFVWVEISFSLTREEETGGPNGYVAIIRDISQRKAVE 290 >UniRef50_B8HWB5 Signal transduction histidine kinase n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HWB5_CYAP4 Length = 3706 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 92/300 (30%), Positives = 164/300 (54%), Gaps = 9/300 (3%) Query: 291 RAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQL 350 +A + S+ R E +A+G+ V EG+++Q N+ LC+ +GY+ EL T+ + Sbjct: 2330 KAAEAELRASQARLRATFEQAAVGIVQVSLEGRFIQVNQKLCEIVGYTASELLNKTYADI 2389 Query: 351 TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQ 410 T PED+ +QV L++G+ + + +EKRY ++G++VWA ++VSLV + G P YFIA Sbjct: 2390 THPEDVEISHEQVRHLLAGDQSAFILEKRYIRKDGELVWANVSVSLVYGSAGQPDYFIAV 2449 Query: 411 IEDINELKRTEQVNQQLME-------RITLANEAGGIGIWEWELKPNIFSWDKRMFELYE 463 IEDI E R EQ Q + R+ LA EA +G WE L+ W + + ++ Sbjct: 2450 IEDITERIRLEQERNQSQQKLRAESLRLQLALEAAEMGTWECCLETGEIFWSEPVEAMFG 2509 Query: 464 IPPHIKP-NWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANR 522 P P + + + E + P DR I + +++P+ +E+RI DG A + Sbjct: 2510 FAPGTFPGHREAFIERLYPADRDRVLAAITHTFATQTPYSIEYRIQRPDGTLRWLAAWGK 2569 Query: 523 VLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNP 582 V++ + + R++G+ D+T+ KQ E+L +E+L + L+S G+ + +++ +++P Sbjct: 2570 VISLDSGL-RMVGVAADITDRKQAEESLRLSQEQLQLALESAGDGLWDWNVSTGAAYLSP 2628 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 70/270 (25%), Positives = 128/270 (47%), Gaps = 3/270 (1%) Query: 374 YSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITL 433 Y +E R +GDV W + + + G I EDI + K E +Q E++ L Sbjct: 858 YDLEYRIIRPDGDVRWVHIRSYPLVDSQGQVNRIIGVCEDITDRKTAEVKIRQSEEQLRL 917 Query: 434 ANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRD 493 + E GIG W W + W +M EL E+PP ++ +Q+W++ + P D E ++ Sbjct: 918 SLEFTGIGAWSWHPGTGEYFWTGQMAELLELPPGLENMYQIWHDRIHPADVDRVEAGLQS 977 Query: 494 SLQSRSPFKLEFRITVKDGIRHIRALANR-VLNKEGEVERLLGINMDMTEVKQLNEALFQ 552 +L + F E+R ++DG R++ + V + G+VER+LG+ +D+TE K + +L Q Sbjct: 978 ALATGGLFAEEYRYFLQDGRTVWRSVKGQGVYTETGDVERVLGVVVDITEQKSIEMSLRQ 1037 Query: 553 EKERLHITLDSIGEAVVCIDM-AMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDN 611 + R +I + + + +++P E + G + E P + + D Sbjct: 1038 SEARFREIAQTISQIFFIESLFTGEYLYISPAYETIWGRSCESLYADPKSWLESVHPDDY 1097 Query: 612 GPLMENIYSADTSRSAIEQDVVLHCRSGGS 641 ++E++ RS +E++ + RS G Sbjct: 1098 AYVVESLAGQFAGRSFVEREYRI-IRSDGE 1126 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 84/348 (24%), Positives = 153/348 (43%), Gaps = 16/348 (4%) Query: 335 LGYSQEELRGLTF--QQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALL 392 G+S+ E+ G T Q + DL +Q+ E+L+ G + R Y ++G V+ Sbjct: 561 FGWSETEVIGKTMLEWQFIFEPDLESVVQEGERLLVGG-GSGVCSNRNYRKDGRVINCEW 619 Query: 393 AVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIF 452 S + G + ++ ++D+ K+ + + ER +LA A +G+WEW LK N Sbjct: 620 FNSALVDESGKLIAILSMVQDVTYRKQADLALRTAKERYSLATRAARVGVWEWNLKTNDI 679 Query: 453 SWDKRMFELYEIPPHIKPN-WQVWYECVLPEDRQHAEKVIRDSLQSR-SPFKLEFRITVK 510 D + L PN + W P+DRQ +D L + F LE R+ + Sbjct: 680 YIDPNIKALAGYADTEFPNDIEHWLLLAHPDDRQRILATAQDYLNGTLAQFVLEHRLLHR 739 Query: 511 DG-IRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEA-V 568 DG I + + ++ G+ ERL+G + D+TE K ++L + +ER + + + ++ Sbjct: 740 DGSIVWVLVRGELLRDQHGQPERLIGTDTDITERKVAEQSLRESEERFRLLAEHLRDSFF 799 Query: 569 VCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAI 628 +C + +++P E + G T E+ P + + + P + + A+T ++ Sbjct: 800 ICTPTLDRYLYVSPAVETIWGITPEQLYANPRVWLERVH-----PEDWDYFIANTPLDSL 854 Query: 629 EQDVVLHCR----SGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESR 672 D L R G VH PL G + V +D+T+ + Sbjct: 855 ATDYDLEYRIIRPDGDVRWVHIRSYPLVDSQGQVNRIIGVCEDITDRK 902 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 62/238 (26%), Positives = 111/238 (46%), Gaps = 23/238 (9%) Query: 376 MEKRYYNRNGDVVWALLA-------------VSLVRHTDGTPLYFIAQIEDINELKRTEQ 422 E R+++R+G + W V++V H T A++ D R + Sbjct: 85 FEYRFHHRDGSLRWIAATQTTQYEPASNSWIVTVVGHDITTHKQLEAELADRETQLRYRE 144 Query: 423 VNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI-PPHIKPNWQVWYECVLP 481 +Q ME A G+G WE+EL SW + +F ++ + P +P++ + + + P Sbjct: 145 --RQFME----AQRVAGVGSWEFELSSQKISWSEGLFRIFGLDPEQPEPDYATYLQLLHP 198 Query: 482 EDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLNKEGEVERLLGINMDM 540 +D ++ I ++Q+ P+ +E R DG R+ V + EG V RL+G MD+ Sbjct: 199 DDVDLLQQSINRAIQTGVPYTIELRHFHSDGSYRYQEGRGEPVFDAEGRVIRLIGTAMDI 258 Query: 541 TEVKQLNEALFQEKERLHITLDSIGE-AVVCIDMAMKITFMNPVAEKMSGWTQEEALG 597 T+ ++L E +E E+ ++TL I + D+ ++NP +M+G T E G Sbjct: 259 TD-RKLTELALRESEQRYMTLTEIAPVGIFRTDLQGDCLYVNPKWCEMAGRTATEVQG 315 Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 68/274 (24%), Positives = 125/274 (45%), Gaps = 8/274 (2%) Query: 321 EGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVE--KLISGEINTYSMEK 378 + ++L N A + EE+ G T +L W DL Q + +++ + E+ Sbjct: 2750 QSRFLGCNSAFANDYCLTIEEIIGKTDLELPWA--AWADLYQADDARVMQTRTPKLNYEE 2807 Query: 379 RYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAG 438 N G+ +W + + ++ G + + +DI ELK EQ Q R+ LA EA Sbjct: 2808 PTCNMRGEPIWIRTSKIPLTNSQGEVIGILGCYDDITELKFAEQQLQSERLRLELALEAA 2867 Query: 439 GIGIWEWELKPNIFSWDKRMFELYEIPPHIKP-NWQVWYECVLPEDRQHAEKVIRDSLQS 497 +G WE L + W +R ++ P P + + + + P+D++ + S + Sbjct: 2868 DMGTWESNLDMGL--WSERTEAIFGYAPGTFPGDREAFLRLIHPDDQERVFAALSRSFTT 2925 Query: 498 RSPFKLEFRITVKDGIRHIRALANRVLNKE-GEVERLLGINMDMTEVKQLNEALFQEKER 556 RSP+ +E+RI DG A+ +V+ E G R++G+ +D+TE KQ L +ER Sbjct: 2926 RSPYSVEYRIHRLDGQLRWVAVNGKVVETEDGTGLRIVGVALDITERKQAEATLRDSEER 2985 Query: 557 LHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGW 590 L + L + + + +++ + P M G+ Sbjct: 2986 LRLALTASNQGLYDLNIQTGQAIVTPEYATMLGY 3019 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 73/328 (22%), Positives = 144/328 (43%), Gaps = 7/328 (2%) Query: 353 PEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIE 412 PED+ LQ + ++ + E R + +G + W + S R +G L++ I Sbjct: 1613 PEDV-PSLQASIAASAQDLRPFFNEHRLHTPSG-IKWVQVLASPERSENGA-LFWDGLII 1669 Query: 413 DINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKP-N 471 D+ K+ E ++ R LA E G WE+++ W + L + P+ +P N Sbjct: 1670 DVTAHKQLETALRESEARRRLALELTETGSWEFDVATGEAIWSDSHYRLMGLTPNEQPSN 1729 Query: 472 WQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLNKEGEV 530 +Q W + V P+D E SL +R+P +E+R+ G +R + V + G+ Sbjct: 1730 YQTWRDRVHPDDLDWVEAAFNQSLATRTPLDVEYRVVYPHGTVRWVLTKGQGVYDASGQA 1789 Query: 531 ERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGW 590 R+LG+ MD+++ K AL +++++L L++I D + +N + G+ Sbjct: 1790 LRMLGVMMDISDRKIAEAALQEKQQQLTSLLNNIPHIAWLKDRDGRFLAVNEPFAQACGY 1849 Query: 591 TQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITP 650 + +G+ + + + A + +E+ ++ +G + TP Sbjct: 1850 AASQIVGLTDCDIWSPELAEAYRQDDREVMASRQQKCVEEPLL--TATGIQQWIETIKTP 1907 Query: 651 LSTLDGSNIGSVLVIQDVTESRKMLRQL 678 + G IG+ + D+TE +++ R L Sbjct: 1908 ILNEQGEPIGTAGIALDITERKRIERTL 1935 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 24/229 (10%) Query: 350 LTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIA 409 L P+D + L + ++G + + +E R +R+G +VW L+ L+R G P I Sbjct: 706 LAHPDDRQRILATAQDYLNGTLAQFVLEHRLLHRDGSIVWVLVRGELLRDQHGQPERLIG 765 Query: 410 QIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIK 469 DI E K EQ ++ ER L E L+ + F + + P ++ Sbjct: 766 TDTDITERKVAEQSLRESEERFRLLAE---------HLRDSFFICTPTLDRYLYVSPAVE 816 Query: 470 PNW-----------QVWYECVLPEDRQH-AEKVIRDSLQSRSPFKLEFRITVKDG-IRHI 516 W +VW E V PED + DSL + + LE+RI DG +R + Sbjct: 817 TIWGITPEQLYANPRVWLERVHPEDWDYFIANTPLDSLA--TDYDLEYRIIRPDGDVRWV 874 Query: 517 RALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIG 565 + +++ +G+V R++G+ D+T+ K + Q +E+L ++L+ G Sbjct: 875 HIRSYPLVDSQGQVNRIIGVCEDITDRKTAEVKIRQSEEQLRLSLEFTG 923 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 83/346 (23%), Positives = 149/346 (43%), Gaps = 28/346 (8%) Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 F + +P D ++ L + + + YS+E R +G + W L A V D + L Sbjct: 2522 FIERLYPADRDRVLAAITHTFATQ-TPYSIEYRIQRPDGTLRW-LAAWGKVISLD-SGLR 2578 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRM-----FEL 461 + DI + K+ E+ + E++ LA E+ G G+W+W + R +++ Sbjct: 2579 MVGVAADITDRKQAEESLRLSQEQLQLALESAGDGLWDWNVSTGAAYLSPRWLAILGYDV 2638 Query: 462 YEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRS-PFKLEFRITVKDGIRHIRALA 520 + P H+ W + P+DR ++ +LQ S P+++E+R K G A Sbjct: 2639 GDWPGHVD----TWERLLHPDDRARMLALLNANLQDGSVPYQVEYRALAKSGEWRWVANY 2694 Query: 521 NRVLNKE--GEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKIT 578 +V+ ++ G+ R++G+ D+T+ KQ + L + + L + LD+I + V D + Sbjct: 2695 GKVVERDQFGQPLRMVGLIQDITDRKQTEQDLQESRNMLRLVLDTIPQRVFWKDWQSRFL 2754 Query: 579 FMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLH--- 635 N T EE +G L + + D +Y AD +R + L+ Sbjct: 2755 GCNSAFANDYCLTIEEIIGKTDLELPWAAWAD-------LYQADDARVMQTRTPKLNYEE 2807 Query: 636 --CR-SGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQL 678 C G + S PL+ G IG + D+TE + +QL Sbjct: 2808 PTCNMRGEPIWIRTSKIPLTNSQGEVIGILGCYDDITELKFAEQQL 2853 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 72/317 (22%), Positives = 133/317 (41%), Gaps = 24/317 (7%) Query: 293 ERKH----ISESETHFRNAMEYSAIGMALVGTEGQWLQTNKAL-----CQFLGYSQ---E 340 ERK + +SE R A+ S G+ + +QT +A+ LGY E Sbjct: 2971 ERKQAEATLRDSEERLRLALTASNQGLYDLN-----IQTGQAIVTPEYATMLGYDPATFE 3025 Query: 341 ELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHT 400 E Q+L P+D+ + I+GEI Y +E R +G W L +V Sbjct: 3026 ETNARWLQRLH-PDDVERLTATYRAYIAGEIPDYQVEFRQRTSDGQWKWILSVGKIVAWD 3084 Query: 401 D-GTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMF 459 + G PL + DI++ K+ E + + A +G WE+ W + + Sbjct: 3085 EVGQPLRMLGTHTDIDDRKQAEADLLKSQALLVEAQRMARMGNWEFNPITQEIYWTEEEY 3144 Query: 460 ELYEI-PPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRIT---VKDGIRH 515 L+ + P +P++ PED + + ++ + P+KL R + +R+ Sbjct: 3145 RLFNLDPSQPEPSYATLASLYHPEDWAVLQVAVEQAITTGDPYKLILRTAPSGPEGSVRY 3204 Query: 516 IRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMA- 574 + + + G+V RL G D+T+ + AL + +ER +SI + + Sbjct: 3205 LETIGQVERDSLGQVVRLYGTCQDITDRRLSELALQESEERFRQLAESITQVFWLTNGDH 3264 Query: 575 MKITFMNPVAEKMSGWT 591 +I +++P E++ G++ Sbjct: 3265 SEILYVSPAYEQVWGYS 3281 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 80/333 (24%), Positives = 130/333 (39%), Gaps = 64/333 (19%) Query: 454 WDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG- 512 W + L+E P W+EC+ PED++ + + L ++ +++E+RI DG Sbjct: 3278 WGYSLASLHESPSQ-------WFECIHPEDQEGVSQAM--LLLTQGNYQMEYRIRRADGQ 3328 Query: 513 IRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCID 572 +R IR + V N+ G+V R+ GI D+TE KQ AL + L +DS + V D Sbjct: 3329 LRWIRDRSFPVYNEAGDVYRIAGIAEDITERKQAELALAENNIILQSVIDSTPDVVFVKD 3388 Query: 573 MAMKITFMNPVAEKMSGWTQEEALGV------PLLTVLHI--------------TFGDNG 612 + + +N + E LG P V HI TF + Sbjct: 3389 LQGRTVIVNDAFADFFNRPKAELLGKADAELWPTEMVTHIQEIDSRIMALGRAETFEEPV 3448 Query: 613 PLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESR 672 P E + + T++ P G IG + + +D+TE + Sbjct: 3449 PAPEGVRTYLTTK-----------------------FPWRNSHGDVIGLIGMSRDITERK 3485 Query: 673 KMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAG 732 + Q+ S L +++ LQ V+S A D K + DS Sbjct: 3486 QAEEQIQASLRQKELL----LREIHHRIKNNLQVVSSLLMLQADTTDDPYTQKVLQDSQE 3541 Query: 733 HAAGDALLRELASLMLSMLRSSDVLARLGGDEF 765 A AL+ E ++ RS+D L R+ E+ Sbjct: 3542 RVAAIALVHE------ALYRSAD-LERIDLSEY 3567 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 67/315 (21%), Positives = 137/315 (43%), Gaps = 18/315 (5%) Query: 297 ISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDL 356 + ESE + E + +G+ +G L N C+ G + E++G +QQ+ PED Sbjct: 268 LRESEQRYMTLTEIAPVGIFRTDLQGDCLYVNPKWCEMAGRTATEVQGPNWQQVLVPEDR 327 Query: 357 NKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINE 416 ++ + + + E + E + +G + W + R G ++ + DI+E Sbjct: 328 DRITTEWYQAVQ-ENRPFYGEYCFQKPDGTLTWLVAQAVAERDLQGQVTGYVGTLTDISE 386 Query: 417 LKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPN---WQ 473 KR E QQ E + A + + + D R+ + Y +I P + Sbjct: 387 RKRAETELQQTHENLEAIFAAFPDLFFRLDSEGTFL--DYRVGQNYLSDLYIPPQEFLGR 444 Query: 474 VWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERL 533 E + P+ Q +++I +L++ S E+ +T+ G ++ A R++ G ++L Sbjct: 445 SLQEVLPPDLAQPFKQLIHQALETESIVGTEYLMTLAGGEQYYEA---RLVPLSG--DQL 499 Query: 534 LGINMDMTEVKQLNE-------ALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEK 586 +GI +++E KQ +L Q ++++ + ++ V D +I + A Sbjct: 500 IGIVRNISERKQQEAERHAAELSLQQAYQQINSLIKNMPLGTVIWDEQFRIQRWSEQAVA 559 Query: 587 MSGWTQEEALGVPLL 601 + GW++ E +G +L Sbjct: 560 IFGWSETEVIGKTML 574 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 67/313 (21%), Positives = 135/313 (43%), Gaps = 19/313 (6%) Query: 297 ISESETHFRN-AMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPED 355 + +SE FR A S I G++L + A G S E L +W E Sbjct: 1035 LRQSEARFREIAQTISQIFFIESLFTGEYLYISPAYETIWGRSCESLYA---DPKSWLES 1091 Query: 356 LN-KDLQQVEKLISGEINTYSMEKRYYN---RNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 ++ D V + ++G+ S +R Y +G++ W +++VR G ++ I Sbjct: 1092 VHPDDYAYVVESLAGQFAGRSFVEREYRIIRSDGEIRWIFAQLTMVRDEAGHAIHCIGTA 1151 Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIP-----P 466 DI++ K E Q+ R+ + +G WE +L+ W + ++ ++E+ P Sbjct: 1152 ADISDRKIAELALQKSEARLKESQRIAKLGGWEIDLQSGEQYWSEEVYNIHELNIDDEYP 1211 Query: 467 HIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFR-ITVKDGIRHIRALANRVLN 525 + N + P+ + ++++Q + LE IT K R ++++ ++ Sbjct: 1212 NCLENPDYYINFYAPDAQPIIRATFQNAIQLGEAYDLEVPFITAKGNHRWVKSIGQPIIV 1271 Query: 526 KEGEVERLLGINMDMTEVKQLNEALFQEKER----LHITLDSIGEAVVCIDMAMKITFMN 581 G V + GI D+T+ KQL +L +++ L+ T+ S+ V + + + + Sbjct: 1272 N-GTVTHISGILQDITDRKQLELSLQASEQKLTQILNRTVASVSSFRVFANQDWEYEYFS 1330 Query: 582 PVAEKMSGWTQEE 594 E++ G+ +E Sbjct: 1331 AGCEQLFGYGSQE 1343 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 80/358 (22%), Positives = 148/358 (41%), Gaps = 33/358 (9%) Query: 353 PEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIE 412 PE ++LQ+V+ +GE + + R + N +V LV +D L ++ + Sbjct: 2013 PEVFTRNLQRVQ---AGETLQFEGQGRRLDNNTTFD-TETSVRLVSLSDRPVL--LSGVR 2066 Query: 413 DINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNW 472 DI++ KR E+ ++ R A I+ ++ N ++R E+ P Sbjct: 2067 DISDRKRAERALRKSERRYATLAAAAPTAIFCFDQPFNCTYVNQRWSEITGRPLESALG- 2125 Query: 473 QVWYECVLPEDRQHAEKVIRDSL-QSRSPFKL----EFRITVKDG-IRHIRALANRVLNK 526 + W + PEDR+ KV + Q S KL E R+ DG + A ++ Sbjct: 2126 RGWLDTAHPEDRELMVKVYAEEFAQMASGQKLLSTGEGRMLRPDGSVVWFYAQVAPEIDL 2185 Query: 527 EGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEK 586 +G V +G D+T KQ L + + + ++ + + D+ + T+++P + Sbjct: 2186 DGSVVGYIGTLTDITARKQAESELAESEAKFRRLVEGANDLIWAGDVEGRFTYLSPQFKT 2245 Query: 587 MSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLH------CRSGG 640 + GW E +G P ++H P ++ AD + + V H R G Sbjct: 2246 LFGWEASEWIGQPFFELIH-------PDDRSLLGADHWQESEPNQKVGHREFRHRHRQGH 2298 Query: 641 SYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEK 698 V S TP+ G+ IG ++ D+++ + +L S + RA+FE+ Sbjct: 2299 YLWVTSSATPILDPKGTFIGFQGILSDISDRKAAEAELRASQAR-------LRATFEQ 2349 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 67/281 (23%), Positives = 120/281 (42%), Gaps = 24/281 (8%) Query: 322 GQWLQTNKALCQFLGYSQEELRG--LTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKR 379 G W + +A+ GY+ G F +L P+D + + + + + YS+E R Sbjct: 2879 GLWSERTEAI---FGYAPGTFPGDREAFLRLIHPDDQERVFAALSRSFTTR-SPYSVEYR 2934 Query: 380 YYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGG 439 + +G + W + +V DGT L + DI E K+ E + ER+ LA A Sbjct: 2935 IHRLDGQLRWVAVNGKVVETEDGTGLRIVGVALDITERKQAEATLRDSEERLRLALTASN 2994 Query: 440 IGIWEWELKPN--IFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQS 497 G+++ ++ I + + Y+ P + W + + P+D + R + Sbjct: 2995 QGLYDLNIQTGQAIVTPEYATMLGYD-PATFEETNARWLQRLHPDDVERLTATYRAYIAG 3053 Query: 498 RSP-FKLEFRITVKDGI-RHIRALANRVLNKE-GEVERLLGINMDMTEVKQLNEALFQEK 554 P +++EFR DG + I ++ V E G+ R+LG + D+ + KQ L + + Sbjct: 3054 EIPDYQVEFRQRTSDGQWKWILSVGKIVAWDEVGQPLRMLGTHTDIDDRKQAEADLLKSQ 3113 Query: 555 ERLHITLDSIGEAVVCIDMA-MKITFMNPVAEKMSGWTQEE 594 L V MA M NP+ +++ WT+EE Sbjct: 3114 ALL----------VEAQRMARMGNWEFNPITQEIY-WTEEE 3143 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 79/351 (22%), Positives = 143/351 (40%), Gaps = 32/351 (9%) Query: 289 AFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQ 348 A + ++ESE FR +E + + EG++ + G+ E G F Sbjct: 2201 ARKQAESELAESEAKFRRLVEGANDLIWAGDVEGRFTYLSPQFKTLFGWEASEWIGQPFF 2260 Query: 349 QLTWPEDLNKDLQQVEKLISGEINTY--SMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 +L P+D + L + E N E R+ +R G +W + + + GT + Sbjct: 2261 ELIHPDD--RSLLGADHWQESEPNQKVGHREFRHRHRQGHYLWVTSSATPILDPKGTFIG 2318 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP 466 F + DI++ K E + R+ E +GI + L+ ++++ E+ Sbjct: 2319 FQGILSDISDRKAAEAELRASQARLRATFEQAAVGIVQVSLEGRFIQVNQKLCEIVGYTA 2378 Query: 467 HIKPNWQVWYECVLPEDRQHAEKVIRDSLQ-SRSPFKLEFRITVKDG-IRHIRALANRVL 524 N + + + PED + + + +R L +S F LE R KDG + + V Sbjct: 2379 SELLN-KTYADITHPEDVEISHEQVRHLLAGDQSAFILEKRYIRKDGELVWANVSVSLVY 2437 Query: 525 NKEGEVERLLGINMDMTEVKQLNEALFQEKE-------RLHITLDS--IGEAVVCIDMAM 575 G+ + + + D+TE +L + Q ++ RL + L++ +G C++ Sbjct: 2438 GSAGQPDYFIAVIEDITERIRLEQERNQSQQKLRAESLRLQLALEAAEMGTWECCLETG- 2496 Query: 576 KITFMNPVAEKMSGWTQEEALGVPLLTVLHITF-GDNGPLMENIYSADTSR 625 +I + PV E M G+ A G TF G +E +Y AD R Sbjct: 2497 EIFWSEPV-EAMFGF----APG---------TFPGHREAFIERLYPADRDR 2533 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 54/230 (23%), Positives = 102/230 (44%), Gaps = 16/230 (6%) Query: 333 QFLGYSQEEL--RGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWA 390 Q GY +EL + + +P+DL LQ + N + E R+Y+++G + W Sbjct: 1335 QLFGYGSQELIVDKMLWMSRVFPQDLETILQPIFAQFRDGKN-LAAEYRFYHKDGSLRW- 1392 Query: 391 LLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPN 450 + +V + A +D+ K E Q+ R+ LA + WE +L+ + Sbjct: 1393 ISSVYTSEQIEPGCWRITALCQDVTHRKTAEIALQESDTRLRLALDVSNAIAWERDLQTD 1452 Query: 451 --IFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRIT 508 +F+ + IP + E V PED++ + + ++ R F++E R+ Sbjct: 1453 QLLFTSTTTLSHPQRIP------YAKAMELVHPEDQERLHQANQAAIAQRGTFQIEHRVA 1506 Query: 509 VKDGIRHIR--ALANRVLNKE-GEVERLLGINMDMTEVKQLNEALFQEKE 555 + R ++ RVL G +L+G+++D+T+ ++L E QE E Sbjct: 1507 TPGQMPEWRWVQVSARVLTDNLGNPTQLVGMSVDITD-RKLAEIALQESE 1555 >UniRef50_Q12JD4 Diguanylate cyclase/phosphodiesterase n=2 Tax=Shewanella RepID=Q12JD4_SHEDO Length = 755 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 129/454 (28%), Positives = 215/454 (47%), Gaps = 29/454 (6%) Query: 662 VLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDL 721 +++ +D+TE ++ +LS+ ++HD LT L NR FE L L+ +S + + F+DL Sbjct: 295 LMLAEDITERYRLADELSFHSNHDVLTGLPNRVQFELLLDEALKDPDSANA--CVAFLDL 352 Query: 722 DRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIA 781 D+F+ +ND +GH AGD LL ++A + +LR DV+ARLGGDEFG+L+ ESA +A Sbjct: 353 DQFQVINDVSGHQAGDELLCQVAKRLKLLLRKGDVVARLGGDEFGILMYSATQESATLVA 412 Query: 782 TRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVT 841 RI ++++ F W H V S G+ +D N V+SQ D +C +K GR + Sbjct: 413 KRICLQLSEHEFQWRKVKHNVSVSMGLAKLDKNAGDIYTVLSQIDASCRLAKEEGRNQWH 472 Query: 842 VY---EPQQAAAHSE-------RAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWL 891 Y +PQ + +++ A++LDE L + + P L + Sbjct: 473 FYSKDDPQISKLYNQMLASVDITGALALDE----------FELFYQLIEPLEKADTGLHM 522 Query: 892 -ISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS--KGISISLP 948 + L++ +G + F + L+ +DR V + A +A+ + +S+ Sbjct: 523 EVLLRMVQKDGSYVSPAIFLPAAERYNLASRIDRWVIDNLLKWGANNLATWQQLTMVSIN 582 Query: 949 LSVAGLSSATLVNDLLEQLENSP-LPPRLLHLIIPAEAI--LDHAES-VQKLRLAGCRIV 1004 LS L ++ L +L P L +L I A+ LD A + + L+ GC++ Sbjct: 583 LSALSLGDQKFMSWLEMRLMVEPELVDKLCFEITETAAVSQLDQATALIDLLQPLGCKLA 642 Query: 1005 LSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGP 1064 L G F LK D++ +DG+ N+ + D+ ++ I + + + IA Sbjct: 643 LDDFGSGFSSFAYLKCLDVDFVKIDGQFVVNLCQDKSDKAIVAAICQLGKDMEFEVIAEF 702 Query: 1065 VVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 V V L +GVD G IA Q L L + Sbjct: 703 VESVEVGYLLKNLGVDYAQGYAIAKPQRLSSLTS 736 >UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9S8_MAGSM Length = 971 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 156/633 (24%), Positives = 275/633 (43%), Gaps = 31/633 (4%) Query: 479 VLPEDRQHAEKVIRDSLQSRSPFKLEFRITV-KDGIRHIRALANRVLNKEGEVERLLGIN 537 V PED E ++ + KLEFR+ + + R + + EV + G+ Sbjct: 337 VNPEDLPQMEALLAAGGDASRWVKLEFRLCLGSEEPRWFECCVLPIKDDHAEVVQYHGVL 396 Query: 538 MDMTEVKQLNEALFQEKERL-HITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEAL 596 D+TE ++ L RL + + EA++ KI +NP +++G+ +E L Sbjct: 397 HDITERRKGEHDL-----RLAQVLFRTTNEALMISSRDNKIEMVNPAFSRITGYQLDEVL 451 Query: 597 GVP---LLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLST 653 G L + H + P ++ A A E ++ +SG +Y SI ++ Sbjct: 452 GKGPDLLQSGRH-----DAPFYTQMWHALQQDGAWEGEIWNRRKSGETYPEWLSIATVTN 506 Query: 654 LDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQR 713 G + V D+T+ ++ + + A++D LT L NR F +L+ L+ + Q+ Sbjct: 507 DKGETVQYVAAFSDITKRKQAEETILHQANYDFLTDLPNRNLFHDRLQTELKRSQRSGQQ 566 Query: 714 HALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN 773 AL+FIDLDRFK VND+ GH GD LLRE+A + +R SD +ARLGGDEF ++LP+ + Sbjct: 567 VALLFIDLDRFKFVNDTLGHNVGDQLLREVAIRLGHCVRESDTIARLGGDEFTVILPELH 626 Query: 774 -VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYAS 832 E +A +I + + + I + + + AS GIT+ ++ +++ AD+A Y + Sbjct: 627 GPEGVARLAQGMIDKLEERYCIQDHELF-ISASIGITIYPEDADNMMDLVKNADVAMYRA 685 Query: 833 KNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNL--W 890 K GRG Y + A R +++ R+ E + + P + ++ L Sbjct: 686 KENGRGSFCFYTAEMNA--DARQLHKIEQALRVALEEGQFWIHY---QPYVQQSSGLITG 740 Query: 891 LISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAA--KAVASKGISISL 947 + +L W + GEI+ F + L + V A + I+ S+ Sbjct: 741 VEALIRWRNSAGEIVYPDQFIPVAEETGLIVPIGLWVLRSVIGVIAQWQREGHPDITFSV 800 Query: 948 PLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRI 1003 +S LV + L+ + + P+ L L I ++ E +++++ G R+ Sbjct: 801 NVSARQFQEGHLVGQIKAALQENQINPQSLMLEITESLMIRDPEHTLNMLKEIKALGVRV 860 Query: 1004 VLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAG 1063 L G LK D L +D + + DE +++ I A LG+ I Sbjct: 861 ALDDFGTGYSSLGYLKQFPIDLLKIDRSFINGIANSQDDETMVSAIVSMAHSLGVGVIGE 920 Query: 1064 PVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 + + ++ D + G + P D L Sbjct: 921 GIENDQQLQRVNLHACDYVQGFFYSRPMPYDEL 953 >UniRef50_Q1K3N9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3N9_DESAC Length = 657 Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 136/567 (23%), Positives = 247/567 (43%), Gaps = 29/567 (5%) Query: 540 MTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVP 599 M +++ + AL ++ E+ LDS+GE + D + N A +M G++ E G Sbjct: 79 MLRLQRTSLALKEQAEKKSHVLDSVGEGICEFDADGLCCYANREACRMLGYSSFEMSGKN 138 Query: 600 LLTVL--HITFGDN---GPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTL 654 + ++ H +G PL + + R I ++++ R I P L Sbjct: 139 IFSLFRYHDRYGHEVSLEPLWSHRTFSTQKRDTIYEEILWQ-REHEIIATEICIYP--AL 195 Query: 655 DGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRH 714 + + G +LV +D + ++M ++++ SHD LT L N+ +F +L ++ V + ++R+ Sbjct: 196 NAKD-GGILVFRDASVRQEMQSKINFLESHDPLTQLNNKNTFMSELATIIDRVRNQNERY 254 Query: 715 ALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNV 774 AL+ +D+DRF+A+ D G D LL + A + + DV+AR+GGD F +L Sbjct: 255 ALLLVDIDRFQALYDVLGSYVSDQLLIQYAHFLQRTVAEQDVVARIGGDRFAVLKKVSTD 314 Query: 775 ESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKN 834 + AR A ++S + +W + S G+ +I+ + +V A+ AC +K Sbjct: 315 QQARGFAQWLVSESQSFEPVWHLEKVNLTVSVGVKIIEPGDESVDDVFLGAEKACGQAKA 374 Query: 835 GGRGRVTVYEPQQAAAHSERAAMSLDEQWR---MIKE---NQLMMLAHGVASP--RIPEA 886 GR R VY P L+ Q R I+E L L P + Sbjct: 375 EGRSRFKVYNPLAPVYR------KLNRQIRALPFIREALHRNLFFLRRQKICPVGNVEPH 428 Query: 887 RNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS-KGIS- 944 + + + L + +G + + F + L ++DR V + F + K + Sbjct: 429 SDCYEVLLSMQLADGSSLAPEEFLTAAERYDLMPSIDRWVINHCFDWLEEDGERWKNLDF 488 Query: 945 ISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAG 1000 +++ LS + T + L +L + P + I A +++ E + +++ G Sbjct: 489 MAINLSGKSFNDPTFLAYLETKLRRATFPAEKICFEITETAAVENEERSVTFIHRIKRFG 548 Query: 1001 CRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKT 1060 CR L G + F LK D + +DG ++ N + ++T I A LG+KT Sbjct: 549 CRFALDDFGSGMSSFRYLKNFPVDVIKIDGSFIVDMVENELSREIVTSIHNIASALGLKT 608 Query: 1061 IAGPVVLPLVMDTLSGIGVDLIYGEVI 1087 +A + L IGVD + G V+ Sbjct: 609 VAEHAEDQQTLQVLQEIGVDYVQGYVV 635 >UniRef50_UPI0001C3140A diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3140A Length = 1090 Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 197/780 (25%), Positives = 327/780 (41%), Gaps = 59/780 (7%) Query: 322 GQWLQT--NKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKR 379 G W T N+A Q GY +E+ G + L E + + ++ + + + R Sbjct: 289 GGWPATFVNEAFEQLTGYRSDEVVGRSLVLLQGEETDPEAIAEMGAALRSADECW-VTVR 347 Query: 380 YYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDIN-------ELKRTEQVNQQLMERIT 432 Y R+G V W + + V DG +I + D+ EL TE + L+E I Sbjct: 348 NYRRDGSVFWNEIFLMPVADDDGVVRRYIGILHDVTARVTAAVELAETESRYRTLVETIP 407 Query: 433 LANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNW----QVWYECVLPEDRQHAE 488 + EW+ + ++ E+ P W +W + P+D Sbjct: 408 AVTY-----VAEWDELGTLIYVSPQIEEMMGFP---AAGWLGETSLWDTQIHPDDVDRVM 459 Query: 489 KVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLNKEGEVERLLGINMDMTEVKQLN 547 R + + F E+R+ DG I + + ++ G GI D+T + Sbjct: 460 AETRYAFRQEQAFDCEYRLIAADGRIVWVWEHDTVIRDEHGRPRLTQGIITDVTATRIAE 519 Query: 548 EALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEAL-------GVPL 600 AL + +ER + ++ E ++ ++ N A ++ G EE L G P Sbjct: 520 AALAESEERSRAVIGALEEGLLIYGADGRVLSCNAAAVRIFGVDSEEELLGTVVAQGSPR 579 Query: 601 LTVLHITFGDNGPLMENIYSADTSRSAIE------QDVVLHCRSGGSYDVHYSITP---L 651 + +T+ D E + T+ A+E + VV R +++ ++T L Sbjct: 580 V---RMTYEDGS---EVTRTNSTAGRALETGLPQPERVVHFERDDDGWELWATVTSHPLL 633 Query: 652 STLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTH 711 + G+V DVTE R+ Q+++ A HD+LT L NRA ++ L + L Sbjct: 634 REGESRPYGAVSAFTDVTERRRAQEQIAFLAYHDSLTRLPNRALLDEHLALALARARRAG 693 Query: 712 QRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD 771 + AL+++DLD FKAVNDS GHAAGD LL+ +A + +++RSSD+LAR GGDEF +LL D Sbjct: 694 ESVALLYVDLDDFKAVNDSLGHAAGDELLKRIAVRLRAVVRSSDLLARQGGDEFLILLTD 753 Query: 772 CNVE---SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIA 828 + + SA A ++ +A+ + + + VGAS GI++ D+ A +M AD A Sbjct: 754 LDKDPRLSAEAAAKQVETALIEPFHLADAEFE-VGASIGISIYPDDAADADTLMRHADAA 812 Query: 829 CYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQW-RMIKENQLMMLAHGVASPRIPEAR 887 Y K GRG + Y + A +SL + R ++ ++ + +P A Sbjct: 813 MYEVKQAGRGGIASY---GGDSRKTLARLSLTSKLRRALQREDFVVHYQPIVAPATG-AL 868 Query: 888 NLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFF-QQAAKAVASKGISIS 946 + + ++ E ++ F D L A+ V +E QQ A A + Sbjct: 869 HAFEALVRWQDAERGVVGPNEFIPLAEDAGLIEAIGGWVLNEVCRQQRAWHDAGMESHVH 928 Query: 947 LPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCR 1002 + +S L + + + LE L P +L L I A + AE V+ L G R Sbjct: 929 VNVSPRQLRRPDFPSTVRDALEEQRLTPSMLTLEITESAAMLDAERANPIVRALHDLGVR 988 Query: 1003 IVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIA 1062 + + G L+ L +D V + +IT I LGM T+A Sbjct: 989 LAIDDFGAGHSSLARLRDVPVQTLKIDQSFLRGVPDDRQAAAMITAIIELGTALGMVTVA 1048 >UniRef50_C6XK75 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XK75_HIRBI Length = 785 Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 122/443 (27%), Positives = 204/443 (46%), Gaps = 10/443 (2%) Query: 647 SITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQT 706 S +P +G G V DVT+ R ++++Y A DALT + NRA+F +L ++ Sbjct: 305 SASPKRNCEGEFTGYRGVCSDVTQERTAEKKIAYMAHFDALTGVHNRANFSTELEKAVER 364 Query: 707 VNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFG 766 +++ + AL IDLD FK VND+ GH AGD+LL+ +A + + D++ RLGGDEF Sbjct: 365 MHTQGKPFALHCIDLDNFKTVNDTMGHPAGDSLLKIVAHRLSMSISDGDIVGRLGGDEFM 424 Query: 767 LLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQAD 826 +L CN + + +I+ G V V S G + + + E+M AD Sbjct: 425 VLQMGCNDAEEAMLTSDMITDALLEPVSLMGSVLPVSGSVGTSFAPRDGETSKEIMQHAD 484 Query: 827 IACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEA 886 +A YA+K GRG ++EP+ R + + + R ++EN+L M + R Sbjct: 485 LALYAAKQDGRGCNRMFEPKMDLDAKRRTQLEIGLR-RALQENELEMHYQPLMDVRSGTI 543 Query: 887 RNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISI 945 + SL W E +++ F D L L + +A A + IS+ Sbjct: 544 KGYE--SLLRWRRGENDVLLPTEFIEIAEDTGLIVPLGEWIIRTAIAEA--ATWPENISV 599 Query: 946 SLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGC 1001 ++ LS + + +L++ ++ L N+ + P + I +L+ +E ++ LR G Sbjct: 600 AINLSPTQMKNPSLISTVISALANNAMDPARVEFEITESVLLEESEVNIKTLHVLRDLGV 659 Query: 1002 RIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTI 1061 +I L G N L+A D + +D ++ +I + G A+ LGMKT Sbjct: 660 KIALDDFGTGFSSLNYLRAFPFDKIKIDKCFVTEMETRDDCRAIIRAVMGLARDLGMKTT 719 Query: 1062 AGPVVLPLVMDTLSGIGVDLIYG 1084 A + +D L G D + G Sbjct: 720 AEGIENQTHVDLLKAEGCDYMQG 742 >UniRef50_C7LTY3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LTY3_DESBD Length = 1075 Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 167/628 (26%), Positives = 279/628 (44%), Gaps = 26/628 (4%) Query: 477 ECVLPEDRQHAEKVIRDSL-QSRSPFKLEFRITVKDGIRHIRALANRVLNKEGE-VERLL 534 + V P+D Q +E+ ++ + + + LE R K G L +GE E L Sbjct: 443 DLVHPDDWQASEEAMKSLVTKEQKEITLEKRYVRKGGGVFWGLATISPLWDQGEHPESYL 502 Query: 535 GINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEE 594 + D+T K+ E L + T+ E +V + I +NP ++G++ +E Sbjct: 503 AVVRDITVAKKAEEKLLLAAKVFENTV----EGIVVTNTEGTIEQVNPGFTVITGYSADE 558 Query: 595 ALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTL 654 A+G + + + +++ T ++ + G SY +I+ + Sbjct: 559 AVGSNPRILKSDRHAQH--FYQEMWTKLTQDGHWAGEIWNRRKDGESYPEWLTISAVKNE 616 Query: 655 DGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRH 714 G V + D+TE ++ L Y A HDALT + NR +LR+ L + + + Sbjct: 617 AGQTTNYVSIFHDITELKRQQDALEYQAQHDALTGMPNRILLGDRLRMALAQLARSGGKL 676 Query: 715 ALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-N 773 AL+F DLD FK +ND GH GD LL +L+ + +LRS D LARLGGDEF +LLP+ + Sbjct: 677 ALLFFDLDNFKTINDGLGHGVGDELLVDLSRRLERLLRSGDTLARLGGDEFLILLPEIES 736 Query: 774 VESARFIATRIISAVN-DYHFIWEGRV-HRVGASAGITLIDDNNHQAAEVMSQADIACYA 831 V++A IATR++ A+ +H G V + V AS G+T+ D+ ++A +++ AD+A Y Sbjct: 737 VDAASHIATRMLDALKAPFH---HGDVEYFVTASIGLTIAPDDGNEAPKLIKNADMAMYR 793 Query: 832 SKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASP--RIPEARNL 889 +K+ GR + P+ A R +S++ + R E Q L + P I L Sbjct: 794 AKSMGRNNYQYFTPEMDVAAHRR--ISMEYKLRKAIEAQEFELFY---QPLVHIQSGHIL 848 Query: 890 WLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAK-AVASKGISISLP 948 +L W CEG++I F + AL L V QA A +++S+ Sbjct: 849 GAEALIRWRCEGKLISPAEFIPLAEESALILPLGDWVLRTAAHQAKLWQDAGHDLTMSVN 908 Query: 949 LSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQ----KLRLAGCRIV 1004 +S S A L L E L ++ L P L+ I ++ + LR AG Sbjct: 909 ISSRQFSGADLAVTLREVLLDTELRPGRLYFEITESMLMGDVSKAETTLLNLREAGGTFF 968 Query: 1005 LSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGP 1064 L G + LK D L +D ++ + ++ I A+ L ++ +A Sbjct: 969 LDDFGTGYSSLSYLKRLPIDGLKIDRSFIKDITDDSDSRAIVAAIVSMARTLNLRIVAEG 1028 Query: 1065 VVLPLVMDTLSGIGVDLIYGEVIADAQP 1092 V L+ +G ++ G + + P Sbjct: 1029 VETQAQRGLLASMGPIVLQGYLASRPVP 1056 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 66/265 (24%), Positives = 116/265 (43%), Gaps = 25/265 (9%) Query: 297 ISESETHFRNAMEYSAIGMA-LVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPED 355 +S SE FR E +++G+A G ++++ N+ +GYS EL L+ + L P+D Sbjct: 390 LSASERSFRAFFEMASVGVAQFEGDTRRFIKVNRKFSDLMGYSAAELGTLSPRDLVHPDD 449 Query: 356 LNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDIN 415 + ++ L++ E ++EKRY + G V W L +S + P ++A + DI Sbjct: 450 WQASEEAMKSLVTKEQKEITLEKRYVRKGGGVFWGLATISPLWDQGEHPESYLAVVRDIT 509 Query: 416 ELKRTEQ-------VNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHI 468 K+ E+ V + +E I + N G I ++ P + Y + Sbjct: 510 VAKKAEEKLLLAAKVFENTVEGIVVTNTEGTIE----QVNPGF-----TVITGYSADEAV 560 Query: 469 KPNWQVWYECVLPEDR--QHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA-NRVLN 525 N + +L DR QH + + L + E KDG + L + V N Sbjct: 561 GSNPR-----ILKSDRHAQHFYQEMWTKLTQDGHWAGEIWNRRKDGESYPEWLTISAVKN 615 Query: 526 KEGEVERLLGINMDMTEVKQLNEAL 550 + G+ + I D+TE+K+ +AL Sbjct: 616 EAGQTTNYVSIFHDITELKRQQDAL 640 >UniRef50_A1K8B9 Sensor protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K8B9_AZOSB Length = 822 Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 100/316 (31%), Positives = 162/316 (51%), Gaps = 18/316 (5%) Query: 292 AERKHIS----ESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTF 347 AER+ ++ +SE FR + +A+G+ALV EG W + N+ LC +GY++++L +F Sbjct: 310 AERRAVAVALEDSERRFRATFDQAAVGLALVSPEGHWQRVNQRLCDIVGYARDDLLQTSF 369 Query: 348 QQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYF 407 Q +T P+DL+ DL Q++++++G+I+TYSMEKRY +G +VW L VSLVR DG P YF Sbjct: 370 QDITHPDDLDLDLAQMKQVLAGKISTYSMEKRYRRADGRLVWVNLTVSLVRDDDGAPDYF 429 Query: 408 IAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPH 467 I+ IEDI K E + + A G+G W W+L+ N W ++ +Y P Sbjct: 430 ISVIEDIQRRKEAEAALLAREQTLREAQRLAGLGNWSWDLRTNQQVWADEIYRVYGRDPA 489 Query: 468 IK--PNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRAL--ANRV 523 P +V +C E + + SL++ ++ + +DG H A V Sbjct: 490 NGPLPYEEVSRQCS-AESWERLNAAVERSLETGEGYECDVEFVREDG-SHCWATVRGQPV 547 Query: 524 LNKEGEVERLLGINMDMTE-------VKQLNEALFQEKERLHITLDSIGEAVVCIDMAMK 576 + G + L G D+TE +++LN +L Q E L + + + A+ Sbjct: 548 RDANGVIVELKGTVQDITERMETAAALRELNASLEQRVEARTAELTAANKELDSFAYAVS 607 Query: 577 ITFMNPVAEKMSGWTQ 592 +P+ MSG+ Q Sbjct: 608 HDLRSPL-RAMSGFAQ 622 >UniRef50_C1XLY9 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XLY9_MEIRU Length = 1143 Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 122/404 (30%), Positives = 195/404 (48%), Gaps = 44/404 (10%) Query: 473 QVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRH---IRALANRVLNKEGE 529 Q+ ++ + PEDR+ A ++ SL ++LE R G H I L + + EG Sbjct: 603 QLAFDYLAPEDREKAMRLAEQSLAGAGSYQLEGRYRHAKG--HYVWIDTLVTYIYDGEG- 659 Query: 530 VERLLGI---NMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEK 586 RL+G D+TE +Q EAL + + RL +SI + VV +D ++ ++ P E+ Sbjct: 660 --RLVGSVVSGRDVTERRQAEEALREREYRLRQITNSIRDVVVLLDPLARVQYVTPSVEQ 717 Query: 587 MSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSR---SAIEQDVVLHCRSGGSY- 642 + G+ EE +G P+ L A+ R AI + V G + Sbjct: 718 ILGYRPEELVGKPISM-----------LAGKAQWAEIRRRGLQAIREKRVYSTECGCKHK 766 Query: 643 DVHY----SITPLSTLDGSNIGSVLV-IQDVTESRKMLRQLSYSASHDALTHLANRASFE 697 D H S+ D + ++V ++D++E ++ + Y A HD LT L NR + Sbjct: 767 DGHVVWIESLVNFVWDDAEALQGIVVGMRDISERKQQQAYVEYMAYHDELTKLPNRRALR 826 Query: 698 KQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVL 757 + LL + +L+++DLD FK VND+ GH GD LL E++ ++ LR+ D+L Sbjct: 827 RAAEELLSRASQREIPVSLLYLDLDNFKTVNDTLGHDVGDELLVEVSQVLSKQLRAEDML 886 Query: 758 ARLGGDEFGLLLPDCNVESARFIATRIISAV-------NDYHFIWEGRVHRVGASAGITL 810 ARLGGDEF +L + + E AR +A+R+ A+ N H ++ +G S GI Sbjct: 887 ARLGGDEFACILFNTDTEQARQVASRMSRAIRSALGAGNPAH-----KLPSLGVSVGIAS 941 Query: 811 IDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSER 854 + E++ ADIA Y +K G RV VY+P ++ ER Sbjct: 942 FPKDGRTFVELLKVADIAMYQAKGSG-SRVVVYDPAKSPYTEER 984 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 59/236 (25%), Positives = 100/236 (42%), Gaps = 39/236 (16%) Query: 475 WYECVLPED--------RQHAEKVI----RDSLQSRSPFKLEFRITVKDGIRHIRALANR 522 W+E +PE+ +Q A++ I R+++++RS E R V ALA Sbjct: 101 WFELFVPEEEGLRALFEQQMAQETIMPQHRNAIRTRSG---ELRQVVWRN-----ALAR- 151 Query: 523 VLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNP 582 + G V I D+T +++ E + + LH ++++ + V+ D M+I + P Sbjct: 152 --DAHGRVVGATSIGQDITAIERAEEGRLRSERILHQIVETVQDVVLLTDAEMRIQYTTP 209 Query: 583 VAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCR----- 637 + GW EE G + T+L P + I+ R A Q+ R Sbjct: 210 SMYPVGGWRPEELEGRSVFTLLD-------PEQQRIFQR-MIREATPQNHTNRARFSYQR 261 Query: 638 -SGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLAN 692 G + SI L + G+ G+V+ I+DVTE + + + S L LAN Sbjct: 262 PDGQRRILEASINFLFSAKGAFQGAVVGIRDVTEHYQA--EQAVRESEQRLRELAN 315 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 4/134 (2%) Query: 290 FRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRG-LTFQ 348 +RAE + + +SE R + +AL G + ++ + LGY E++ G L F Sbjct: 549 YRAE-QAVRQSEQMLRQITDAMQDVVALTDPRGYFRYLTPSVERLLGYRPEQMLGQLAFD 607 Query: 349 QLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFI 408 L PED K ++ E+ ++G +Y +E RY + G VW V+ + +G + + Sbjct: 608 YLA-PEDREKAMRLAEQSLAG-AGSYQLEGRYRHAKGHYVWIDTLVTYIYDGEGRLVGSV 665 Query: 409 AQIEDINELKRTEQ 422 D+ E ++ E+ Sbjct: 666 VSGRDVTERRQAEE 679 Score = 42.7 bits (99), Expect = 0.091, Method: Compositional matrix adjust. Identities = 45/202 (22%), Positives = 92/202 (45%), Gaps = 8/202 (3%) Query: 481 PEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHI-RALANRVLNKEGEVE-RLLGINM 538 PE ++ +++IR++ + F DG R I A N + + +G + ++GI Sbjct: 233 PEQQRIFQRMIREATPQNHTNRARFSYQRPDGQRRILEASINFLFSAKGAFQGAVVGIR- 291 Query: 539 DMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGV 598 D+TE Q +A+ + ++RL +S+ + V+ +D I ++ P + G+ +E +G Sbjct: 292 DVTEHYQAEQAVRESEQRLRELANSMRDVVMMLDPKGLIEYVTPSVRAVLGYDPQELVGR 351 Query: 599 PLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSN 658 D+ ++E + +A R + + + G + + + L+G+ Sbjct: 352 SAFDFFEPE--DHSWVLEAVRAAREGRRPLRLEYQHRHKDGSRVWLETQLDFVYDLEGNP 409 Query: 659 IGSVL---VIQDVTESRKMLRQ 677 I VL IQD E+ + LR+ Sbjct: 410 IRMVLGARQIQDRREAEEQLRK 431 >UniRef50_C5SBC3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SBC3_CHRVI Length = 1147 Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 100/306 (32%), Positives = 157/306 (51%), Gaps = 15/306 (4%) Query: 542 EVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLL 601 E + A Q +E+ + L+S E + +D+ ++TF+NP A M G+ E +G P+ Sbjct: 574 ERDRAENATRQAEEKARLLLESTTEGIFGLDLEGRVTFINPAAANMLGYEPETLIGQPVH 633 Query: 602 TVLHITFGDNG--------PLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLST 653 ++H + NG P++ + + E VL R G + Y TP+ Sbjct: 634 PLIHHSRA-NGLPLPPECCPILATLQQGQDCHATSE---VLWRRDGSCFPAEYWATPVRR 689 Query: 654 LDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQR 713 D G+V+ D++ ++ ++ + A HD+LT L NR F+++L L + QR Sbjct: 690 -DHRIEGAVVTFHDISARQRAEAEIQHLAFHDSLTGLPNRLLFKEELGQALAALRRDDQR 748 Query: 714 HALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN 773 AL +DLD FK VNDS GH GD LLR +A + ++ R +DVLAR GGDEF LL Sbjct: 749 FALHMLDLDHFKDVNDSLGHPVGDELLRAVAERLTAITRGTDVLARFGGDEFALLQSKIG 808 Query: 774 -VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYAS 832 + A +AT+II A +I R+ + S GI + D H +++++AD+A Y + Sbjct: 809 EIGDAAALATKIIEAFGQAFWIDGNRID-INTSIGILIADQACHDVDDIITRADVALYKA 867 Query: 833 KNGGRG 838 K GRG Sbjct: 868 KEAGRG 873 >UniRef50_C0N6V7 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6V7_9GAMM Length = 605 Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 122/425 (28%), Positives = 198/425 (46%), Gaps = 7/425 (1%) Query: 674 MLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGH 733 M +L +S SHD LT LANR E+ L + L V + AL +IDLD FK +ND+ GH Sbjct: 178 MEARLQFSVSHDDLTGLANRRRLEQALELSLTQVRNFMSTSALFYIDLDSFKVLNDAEGH 237 Query: 734 AAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHF 793 AGD LL ++A+ + R +D L R+G DEF +L+ + + + A A + + + Y F Sbjct: 238 EAGDTLLVQVANSLRRYFRVNDTLVRIGSDEFAVLVDNTDKKMAIQQAEGLRNLFDGYSF 297 Query: 794 IWEGRVHRVGASAGITLIDDNNHQA-AEVMSQADIACYASKNGGRGRVTVYEPQQAAAHS 852 G + + AS GI LI + EV+S A+ ACY +K GR RV +Y P+ H+ Sbjct: 298 EHHGHHYHLSASIGIKLIQRQDATTVGEVLSHANQACYTAKKRGRNRVHLYSPEDREMHT 357 Query: 853 ERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRS 912 R ++ + R + + +L A + +++ G + + F Sbjct: 358 LRHSVEWAPRIRAALKEENFLLEFQPIFALDSGAITHYECLIRMRGDGGVVYYPKEFIPV 417 Query: 913 FSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPL 972 L H +D V + F S IS ++ LS L + ++L+ + + Sbjct: 418 AEAMGLIHQIDFWVVAKAFDLLCGMPDS--ISFAVNLSGNVFLDENLYRLIQQKLKETEI 475 Query: 973 -PPRLLHLIIPAEAILDHAES---VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLL 1028 P R++ I AI + ++ V LR GCR L G ++ LK D L + Sbjct: 476 DPERIVFEITETSAISNFEQTKRMVTNLRSLGCRFALDDFGAGFNSYSYLKHFPVDILKI 535 Query: 1029 DGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIA 1088 DG ++ + +D++L+ + A LG KT+A V ++ L G GVD + G ++ Sbjct: 536 DGGFITDLDNDPVDQLLVKSMIDIAHSLGKKTVAEFVERESTLNLLKGYGVDFVQGYLVG 595 Query: 1089 DAQPL 1093 Q + Sbjct: 596 KPQSI 600 >UniRef50_A3IRJ7 Sensor protein n=9 Tax=cellular organisms RepID=A3IRJ7_9CHRO Length = 3557 Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 89/236 (37%), Positives = 133/236 (56%), Gaps = 7/236 (2%) Query: 297 ISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDL 356 + ESE FR A +Y++IGM LV EGQWL+ N +LC+ +GYS+ EL TFQ +T P+DL Sbjct: 1529 LQESEERFRQAFDYASIGMGLVSPEGQWLKVNSSLCEIIGYSEAELLNTTFQDITHPDDL 1588 Query: 357 NKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINE 416 + DL V ++++GEI TY MEKRY ++ GD++W LL VSLVR G PLYFI+QI+DI++ Sbjct: 1589 DIDLNFVRQMLAGEIVTYKMEKRYIHKQGDIIWILLNVSLVRDHQGEPLYFISQIQDISD 1648 Query: 417 LKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWY 476 K EQ Q + + E IG+ + N + + I + Q+ Y Sbjct: 1649 RKAAEQALQDSEQYVRTLFETSPIGLLLCRMDGNFVELNPAFAAI--IGYSLAETQQLSY 1706 Query: 477 ECVLPEDRQHAEKVIRDSLQSR---SPFKLEFRITVKDGIRHIRALANRVLNKEGE 529 + PE E+V+ L+ P++ E+ K+G L+ R++ + GE Sbjct: 1707 WQITPESYSEQEQVMLKQLEETGYYGPYEKEY--IHKEGYLVPVRLSGRIIERHGE 1760 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 100/314 (31%), Positives = 156/314 (49%), Gaps = 9/314 (2%) Query: 297 ISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDL 356 + ESE FR E++A+G+AL GQ++ N+ C L Y + ELRG TFQ++T+P+DL Sbjct: 1275 LQESEARFRVFFEHAAVGIALASMTGQFITVNQKFCDILDYQESELRGKTFQEITYPDDL 1334 Query: 357 NKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINE 416 ++L+SGE+N YS+EKRY R+G + W+ SLVR GTP YF+ IEDI + Sbjct: 1335 PDTKTYAQQLVSGEVNAYSVEKRYVKRDGQITWSNTTASLVRDATGTPQYFVGVIEDIEQ 1394 Query: 417 LKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWY 476 K EQ Q R E GI+ + + N + R E+ + P Q W Sbjct: 1395 RKIAEQKLQASERRYATLTELSPTGIFRTDPQGNCCYVNTRWCEMAGLTPE-DAQGQGWV 1453 Query: 477 ECVLPEDRQHAEKVIRDSLQSRS-PFKLEFRITVKDG-IRHIRALANRVLNKEGEVERLL 534 + P+DR+ + + Q+R PF + R DG + + A + +G V + Sbjct: 1454 NALHPDDRERMMQEWDQAAQNRQMPFNTDCRFQKPDGTVIWLVVQATEETDHQGNVTGYV 1513 Query: 535 GINMDMTEVKQLNEALFQEKERLHITLD--SIGEAVVCIDMA-MKITFMNPVAEKMSGWT 591 G D+++ KQ AL + +ER D SIG +V + +K+ N ++ G++ Sbjct: 1514 GSITDISDRKQKEIALQESEERFRQAFDYASIGMGLVSPEGQWLKV---NSSLCEIIGYS 1570 Query: 592 QEEALGVPLLTVLH 605 + E L + H Sbjct: 1571 EAELLNTTFQDITH 1584 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 75/305 (24%), Positives = 124/305 (40%), Gaps = 21/305 (6%) Query: 292 AERKH----ISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQ-----FLGYSQ--- 339 ERK + ESE R A++ + G+ + L T KA+ LGY Sbjct: 2431 TERKQAEQALEESEERLRLALKSANQGLYDLN-----LTTGKAIVSAEYATMLGYDPATF 2485 Query: 340 EELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVR- 398 EE G ++L P+D+ + ++G I Y +E R + G W L +V Sbjct: 2486 EETNGKWIERLH-PDDVERVTNVYLNYVAGTITDYRVEFRQQTQQGKWKWILSVGKIVAW 2544 Query: 399 HTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRM 458 G PL + DI++ K E+ + E++ A +A G + W + WD + Sbjct: 2545 DESGQPLRMLGTHTDISDRKSIEEQLIKREEQLRAALDASETGTFRWYIATKQLEWDDNL 2604 Query: 459 FELYEIP-PHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRH-I 516 L+ +P + V P+DRQ SLQ F+ EFR+ DG H + Sbjct: 2605 NRLFGLPLGATAHELDEFITLVHPDDRQTVIDACNRSLQEGVDFEEEFRVVWPDGSIHWL 2664 Query: 517 RALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMK 576 +++G + G +D+T+ KQ + L + L ++S + V D+ + Sbjct: 2665 FDKGKLFCDQQGNPCYMAGACVDITQRKQTEQELQESNIILRSVIESTPDVVFVKDLQGR 2724 Query: 577 ITFMN 581 I N Sbjct: 2725 IVVGN 2729 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 69/323 (21%), Positives = 140/323 (43%), Gaps = 12/323 (3%) Query: 289 AFRAERKHISESE-THFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTF 347 A R ++ IS+ E + + +++ SAI +A+ T+G+ N C+ Y++EEL G T Sbjct: 1141 AERTKKLQISQQELSDLKYSIDQSAI-VAITDTQGKITYANDHFCEVFQYNREELIGQTH 1199 Query: 348 QQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYF 407 + Q++ I G+ + E + ++G W + G P + Sbjct: 1200 HLVNSGYHSPAFFQELWTTI-GQGKVWKGEIKNQAKDGSHYWVDTVIVPFLDEAGKPFQY 1258 Query: 408 IAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKR---MFELYEI 464 +A +I + K+ E Q+ R + E +GI + + +++ + + E Sbjct: 1259 MAIRFEITQRKQAEIALQESEARFRVFFEHAAVGIALASMTGQFITVNQKFCDILDYQES 1318 Query: 465 PPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRV 523 K ++ Y LP+ + +A++++ + + + +E R +DG I A+ V Sbjct: 1319 ELRGKTFQEITYPDDLPDTKTYAQQLVSGEVNA---YSVEKRYVKRDGQITWSNTTASLV 1375 Query: 524 LNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIG-EAVVCIDMAMKITFMNP 582 + G + +G+ D+ E +++ E Q ER + TL + + D ++N Sbjct: 1376 RDATGTPQYFVGVIEDI-EQRKIAEQKLQASERRYATLTELSPTGIFRTDPQGNCCYVNT 1434 Query: 583 VAEKMSGWTQEEALGVPLLTVLH 605 +M+G T E+A G + LH Sbjct: 1435 RWCEMAGLTPEDAQGQGWVNALH 1457 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 41/145 (28%), Positives = 71/145 (48%), Gaps = 8/145 (5%) Query: 291 RAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQL 350 +A K + +SE + R E S IG+ L +G + N A LG + EE LT+ ++ Sbjct: 2942 KAAEKALRQSEEYNRTLFETSTIGLVLCRMDGTLVDVNPAYAAILGRTVEETLNLTYWEI 3001 Query: 351 TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQ 410 T + Q+E + + Y+ EK Y ++G +V L+ L+ +G Y + Sbjct: 3002 TPETYAEAEAAQLESM--AKTGRYAFEKEYIRKDGSLVPVALS-GLIVERNGEQ-YIWSC 3057 Query: 411 IEDINELKRTE----QVNQQLMERI 431 +EDI++ K+ E + N QL +R+ Sbjct: 3058 VEDISQRKQAEVALKEANNQLEQRV 3082 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 40/137 (29%), Positives = 72/137 (52%), Gaps = 13/137 (9%) Query: 291 RAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQL 350 +A + + +SE + R E S IG+ L +G +++ N A +GYS E + L++ Q+ Sbjct: 1650 KAAEQALQDSEQYVRTLFETSPIGLLLCRMDGNFVELNPAFAAIIGYSLAETQQLSYWQI 1709 Query: 351 TWPEDLNKD----LQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLV-RHTDGTPL 405 T PE ++ L+Q+E+ +G Y EK Y ++ G +V L+ ++ RH + Sbjct: 1710 T-PESYSEQEQVMLKQLEE--TGYYGPY--EKEYIHKEGYLVPVRLSGRIIERHGEK--- 1761 Query: 406 YFIAQIEDINELKRTEQ 422 + + IEDI + K E+ Sbjct: 1762 FIWSSIEDITDRKTAEK 1778 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 71/338 (21%), Positives = 137/338 (40%), Gaps = 39/338 (11%) Query: 384 NGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIW 443 +G +W +R+ +G + + +DI++ KR E Q + + E + I+ Sbjct: 2144 DGSTIWLETNKLPLRNLEGEVIGVLGTYQDISDRKRAEAQLAQQEQFLRSIYEGAEMPIF 2203 Query: 444 EWELKP-NIFSW------DKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQ 496 E+ P N F + ++M L + K +V E E QH + L+ Sbjct: 2204 VVEVLPDNQFRYAGWNLASEKMSGLRAVDVLGKHPVEVLGE----EIGQHFCQNYCRCLE 2259 Query: 497 SRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKER 556 + + E + + +G+ N + N EG + R++G +D+++ K+ +AL + + Sbjct: 2260 TGKAIQYEEHLDLPNGVVWTLTTLNPLKNSEGNIYRIVGTAVDISDRKEAEQALEESRNM 2319 Query: 557 LHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLME 616 + LD+I + V D + NP T + +G L + +GD Sbjct: 2320 FKLVLDTIPQRVFWKDRQSRFLGCNPAFANDYQLTHADIVGKTDLELPWAKWGD------ 2373 Query: 617 NIYSADTSRSAIEQDVVLHCR------SGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTE 670 +Y AD +R + L+ +G + + S PL+ G +G + DVTE Sbjct: 2374 -LYRADDARVMNTRTPQLNYEEPTNNLAGENIWIRSSKIPLTNTQGEVVGVLGCYDDVTE 2432 Query: 671 SRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVN 708 ++ + L S E++LR+ L++ N Sbjct: 2433 RKQAEQALEES---------------EERLRLALKSAN 2455 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 43/187 (22%), Positives = 90/187 (48%), Gaps = 6/187 (3%) Query: 382 NRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIG 441 N G+ +W + + +T G + + +D+ E K+ EQ ++ ER+ LA ++ G Sbjct: 2398 NLAGENIWIRSSKIPLTNTQGEVVGVLGCYDDVTERKQAEQALEESEERLRLALKSANQG 2457 Query: 442 IWEWELKPN--IFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSR- 498 +++ L I S + Y+ P + W E + P+D + V + + Sbjct: 2458 LYDLNLTTGKAIVSAEYATMLGYD-PATFEETNGKWIERLHPDDVERVTNVYLNYVAGTI 2516 Query: 499 SPFKLEFRITVKDGI-RHIRALANRVL-NKEGEVERLLGINMDMTEVKQLNEALFQEKER 556 + +++EFR + G + I ++ V ++ G+ R+LG + D+++ K + E L + +E+ Sbjct: 2517 TDYRVEFRQQTQQGKWKWILSVGKIVAWDESGQPLRMLGTHTDISDRKSIEEQLIKREEQ 2576 Query: 557 LHITLDS 563 L LD+ Sbjct: 2577 LRAALDA 2583 >UniRef50_C6ME80 Sensor protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6ME80_9PROT Length = 1222 Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 93/309 (30%), Positives = 156/309 (50%), Gaps = 16/309 (5%) Query: 272 PFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKAL 331 PF++ L A I ++ R + + + ESE F+ E +A+G+ +V EG+WL+ N+ Sbjct: 575 PFVVDELRARINRLITERQRVQ-EQLRESEVRFQVIFEQAAVGIGIVSLEGRWLRVNQKF 633 Query: 332 CQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWAL 391 C +GY +EL LTFQ++T+ EDL+ DL V++ ++GEI+TYS+EKRY ++ ++W Sbjct: 634 CDLVGYRHDELTFLTFQEITYAEDLDADLSYVQRTLAGEISTYSLEKRYICKDNSLLWVS 693 Query: 392 LAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNI 451 L VSLVR D TP YFI I+DI Q +++ + A G W W+L N Sbjct: 694 LTVSLVRKQDRTPDYFITIIQDI-------QSRKEIEANLNDAKRIANFGHWRWDLDTNT 746 Query: 452 FSWDKRMFELY----EIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRI 507 W + +F ++ ++PP P ++ E + + ++ + + + Sbjct: 747 QIWSEEIFHIFGRDLDLPPANYPEVAQYFTA---ESWSNLSAAVEKCMREGVSYHCDAEV 803 Query: 508 TVKDGIRH-IRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGE 566 DG H + A + N E ++ L G D+T K AL Q +E+L + ++ Sbjct: 804 VQPDGSHHWVVARGEAIRNAEDQIISLHGTVQDITVRKLAEVALQQSQEQLKLFIEYAPA 863 Query: 567 AVVCIDMAM 575 A+ D M Sbjct: 864 ALAMFDRGM 872 >UniRef50_B5JWR5 Sensory box/ggdef domain/eal domain protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JWR5_9GAMM Length = 728 Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 122/434 (28%), Positives = 206/434 (47%), Gaps = 18/434 (4%) Query: 664 VIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDR 723 I + E + LR L A+HD+LTHL NR F Q+ L TV T Q AL FIDLD Sbjct: 288 TIHAIAERDQALRDL---ANHDSLTHLVNRHFFTDQVISELLTVEDTQQTSALFFIDLDE 344 Query: 724 FKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATR 783 FKA+ND GH AGD LL ++A ++ S +R DV++R GGDEF +L+ A+ +A Sbjct: 345 FKAINDRLGHDAGDRLLVQVAEILKSRVREYDVVSRFGGDEFVVLVSGVGELEAQQVAEG 404 Query: 784 IISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVY 843 I+ + Y + +G+V + S GIT+I+ + E++ QAD AC +K GR + +Y Sbjct: 405 ILQLMEGYQYSEQGQVFNICCSIGITMIESSQFTVDELLKQADSACQMAKLRGRNGLVMY 464 Query: 844 EPQQAAAHSERAAMSLDEQWRM-----IKENQLMMLAHGVASPRIPEARNLWLISLKLWS 898 + A ++ + D W +K+++ ++ + + + R + + L++ Sbjct: 465 D----AGQMQKQQLLEDSGWSKKLAAALKDDRFVLHYQPILDLKSQQVR-YYEVLLRMQG 519 Query: 899 CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAGLSSAT 958 GE+I F + S + R V A +K +S+ LS L Sbjct: 520 EPGELIPPDAFLGAADRFGFSVEVARWVIEHALSTVAHQ-PNKTAGLSINLSAKALEDTQ 578 Query: 959 LVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLSQVGRDLQI 1014 ++ L ++ + + P L + +A+L+ + ++ L GC I++ L Sbjct: 579 FIDWLGSLIKETEIEPSRLAFEVEEQALLNSRQEALLGLKALSGLGCVIIMDGFCAGLSA 638 Query: 1015 FNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTL 1074 L+ D L + EL + + +++ L++ I A+ +G TIAG V L + + Sbjct: 639 SGKLQNIPFDGLKIQRELVTGLLASDVNKTLVSAIAELARVMGKFTIAGFVQDELTLSLV 698 Query: 1075 SGIGVDLIYGEVIA 1088 +GVD G +A Sbjct: 699 KEMGVDCAQGYFLA 712 >UniRef50_Q1PVH4 Conserved hypothetical response regulator protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PVH4_9BACT Length = 685 Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 137/532 (25%), Positives = 242/532 (45%), Gaps = 37/532 (6%) Query: 572 DMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRS--AIE 629 D + T+++P + + G+T EE T D+ L+ N + +RS I+ Sbjct: 154 DASGVFTYISPSIKNILGYTPEE-----FYTRYREYLTDH--LVNNDAAQCLARSVKGIK 206 Query: 630 Q---DVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDA 686 Q ++ ++ ++G + + P+ + I + +D+TE + QL + A HD Sbjct: 207 QPPYEIEMYHKNGATRTLQMQEAPVFDSSKNVISIEGIARDITEIKTSQSQLVFLADHDP 266 Query: 687 LTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASL 746 LT L NR F+++L + L H + AL+F+DLD FK VND+ GH GD LL +L+ + Sbjct: 267 LTCLFNRRRFKEELELRLLEAQRNHIKGALLFLDLDNFKYVNDTLGHQHGDELLIKLSCI 326 Query: 747 MLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASA 806 + LR +D+LARLGGDEF ++LP+ E A+ I+ +++ + + + S Sbjct: 327 LKERLRQTDILARLGGDEFAVILPNTEEEQAQHISKQLVELTRNCLALDSLNPLHITVSI 386 Query: 807 GITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRM- 865 GI + + A +++ AD+A Y +K+ GR R ++ + H D + R+ Sbjct: 387 GIAMFPAHGDTAETLLANADMAMYQAKDEGRDRGCIF----SLEHKIHIETQYDWKRRIK 442 Query: 866 --IKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALD 923 +++N + + + + + + + L+L E++ F + + H +D Sbjct: 443 IALEQNSFALYLQPIINVKTRKI-TAYEVLLRLTEKNQEVVPPLKFLGTAERFGIIHEID 501 Query: 924 R-------RVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRL 976 R R+ E + GI + + LS S L++ + ++ + L P + Sbjct: 502 RWVVVNAIRIIKEL------KLHENGIFLEINLSGKAFSDNELLSIIKREIGENILRPEM 555 Query: 977 LHLIIPAEAILDHAESVQ----KLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGEL 1032 L I AI+++ Q L+ GCR L G FN LK DYL +DG Sbjct: 556 LIFEITETAIIENIAKAQHFIATLKSIGCRFALDDFGSGFSSFNYLKHLPVDYLKIDGSF 615 Query: 1033 CANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYG 1084 ++ N +D+ L+ + A+ L TIA V L IG+D G Sbjct: 616 IQHLSQNSVDQHLVKGMVEAARGLKKLTIAEFVETKETFQLLKEIGIDYAQG 667 >UniRef50_B7KGI8 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KGI8_CYAP7 Length = 1079 Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 113/379 (29%), Positives = 188/379 (49%), Gaps = 12/379 (3%) Query: 300 SETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKD 359 SE FR E +A+G+ +V GQ+++ N+ C+ +GYSQ+EL T+Q++T P+DL+K+ Sbjct: 356 SEAQFRAIFEQAAVGIGIVSLSGQYIRVNQRYCELVGYSQKELLLKTYQEITHPDDLSKN 415 Query: 360 LQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKR 419 L+ V L+ GEI T S+EKRY +NG + W L S V P Y I +EDI+E KR Sbjct: 416 LELVSHLLLGEIQTGSIEKRYICKNGQIQWVNLTASTVSDAQNNPEYLIGIVEDISERKR 475 Query: 420 TEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFEL--YEIPPHIKPNWQ-VWY 476 E+ + ER + +GI + L + + +L Y + + +Q + + Sbjct: 476 AEEALRDSEERFRSIFKQAAVGIVQVSLSGKFILVNDKFVDLVQYSVAELQEKTFQEITH 535 Query: 477 ECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANR-VLNKEGEVERLLG 535 LP++ + ++++R + F LE R KDG L+ V N EGE +G Sbjct: 536 SDDLPQELNYIQQMLRGEI---DDFSLEKRYICKDGSLVWGHLSGSLVRNTEGEPMYFIG 592 Query: 536 INMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEA 595 I D+ E KQ E L Q +E+ +++ E V ID K TF+N +M G+T +E Sbjct: 593 IIEDIRERKQAIEDLRQSEEQYRRIIETTAEGVWIIDQENKTTFVNHRMAQMLGYTIDEM 652 Query: 596 LGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYD-VHYSITPLSTL 654 G +L + ++ N + + +E RS G+Y + P+ Sbjct: 653 KGKSMLDFVD---AQEQEMVAN-HIERRRQGVMEYRDFKFIRSDGNYLWAMIATNPIYDS 708 Query: 655 DGSNIGSVLVIQDVTESRK 673 G +G++ ++ D+TE ++ Sbjct: 709 VGHYVGALGMLTDITERKQ 727 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 82/274 (29%), Positives = 142/274 (51%), Gaps = 13/274 (4%) Query: 292 AERKHISE----SETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTF 347 +ERK E SE FR+ + +A+G+ V G+++ N + YS EL+ TF Sbjct: 471 SERKRAEEALRDSEERFRSIFKQAAVGIVQVSLSGKFILVNDKFVDLVQYSVAELQEKTF 530 Query: 348 QQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYF 407 Q++T +DL ++L +++++ GEI+ +S+EKRY ++G +VW L+ SLVR+T+G P+YF Sbjct: 531 QEITHSDDLPQELNYIQQMLRGEIDDFSLEKRYICKDGSLVWGHLSGSLVRNTEGEPMYF 590 Query: 408 IAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFEL--YEIP 465 I IEDI E K+ + +Q E+ E G+W + + + RM ++ Y I Sbjct: 591 IGIIEDIRERKQAIEDLRQSEEQYRRIIETTAEGVWIIDQENKTTFVNHRMAQMLGYTID 650 Query: 466 PHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRAL--ANRV 523 + + + V ++++ I Q ++ +F+ DG ++ A+ N + Sbjct: 651 ---EMKGKSMLDFVDAQEQEMVANHIERRRQGVMEYR-DFKFIRSDG-NYLWAMIATNPI 705 Query: 524 LNKEGEVERLLGINMDMTEVKQLNEALFQEKERL 557 + G LG+ D+TE KQ E L Q E+L Sbjct: 706 YDSVGHYVGALGMLTDITERKQTEETLQQVNEQL 739 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 52/162 (32%), Positives = 86/162 (53%), Gaps = 1/162 (0%) Query: 685 DALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELA 744 D+LT L NR E+ L+ + L+ ID+D FK ND+ GH AGD +L+E++ Sbjct: 914 DSLTDLYNRRYMEESLKREISLAQRKQHSVGLIMIDVDHFKEFNDTFGHKAGDLVLQEVS 973 Query: 745 SLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFI-WEGRVHRVG 803 + ++ +RS D+ R GG+EF L+LP+ ++ ++ A +I + F ++ V Sbjct: 974 NFLMINVRSGDIACRYGGEEFLLILPEASLTDSQQRAEQIRQGIKQLDFKRYDQSFRSVT 1033 Query: 804 ASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEP 845 S G+ D+ +++ AD A Y +K GR RV V+ P Sbjct: 1034 VSVGVASFPDHGTNNDQLIQAADTALYQAKKQGRDRVVVFSP 1075 >UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YY70_9NEIS Length = 1054 Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 143/542 (26%), Positives = 247/542 (45%), Gaps = 21/542 (3%) Query: 561 LDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALG-VPLLTVLHITFGDNGP-LMENI 618 D+ +A+V D + I +N ++G++ +EA+G P L ++ G P + + Sbjct: 506 FDTSSQAIVISDASNHIVMVNRAFTDITGYSAQEAIGRQPSL----LSSGRQPPAFYQKM 561 Query: 619 YSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQL 678 + R ++ + G Y SI+ L G V + D++E ++ + Sbjct: 562 WQQLAQRGHWAGEIWNRRKDGTIYPEWLSISLLRDEAGQVSHHVALFSDISERKEQEAHI 621 Query: 679 SYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDA 738 + A HD LT L NRA +L ++ R A++F+DLD FK +ND+ GHA GD Sbjct: 622 RHMAEHDFLTDLPNRALIHDRLAQAIRAAARQKNRLAVLFLDLDHFKNINDTLGHAHGDE 681 Query: 739 LLRELASLMLSMLRSSDVLARLGGDEFGLLLPD-CNVESARFIATRIISAVNDYHFIWEG 797 LL+++A + +R SD + R GGDEF L++P+ + A +A R++ + F +G Sbjct: 682 LLKQVAQRLQHTVRGSDTVGRNGGDEFVLIVPELASPAEAAQLAQRLLDDLR-RPFQIDG 740 Query: 798 RVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAM 857 + + S GI+L DN + E++ AD+A Y +K GR R + P+ A +ER + Sbjct: 741 QALAISTSIGISLFPDNGSELQELLVSADLAMYHAKAQGRNRYQFFTPELNAQVAER--L 798 Query: 858 SLDEQWRMIKENQLMMLAHGVASPR--IPEARNLWLISLKLWS-CEGEIIDEQTFRRSFS 914 +L+ R E Q + L V P+ I R + +L W E +I F Sbjct: 799 TLENHLRQALERQQLYL---VYQPQFAIDNRRLVGCEALLRWQHPEQGLISPARFIPLAE 855 Query: 915 DPALSHALDRRVFHEFFQQAAKAVASKG-ISISLPLSVAGLSSATLVNDLLEQLENSPLP 973 + L + R V E +QAA +A+ + +++ +S L L+ ++ L LP Sbjct: 856 ETGLIVEIGRWVLDEACRQAAAWLAAGTPLRVAVNVSARQLGQPDLLAEVEAALARHRLP 915 Query: 974 PRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLD 1029 L L + +++ AE +Q + G + + G LK D + +D Sbjct: 916 SCWLELEVTESTLMEDAEQAVRHLQAFKERGIHLAVDDFGTGYSSLTYLKRFSPDLIKID 975 Query: 1030 GELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIAD 1089 N+ N D +++ I A+ LGM+T+A V +D L+ G D++ G + Sbjct: 976 RAFVMNLPDNRDDAAIVSAIVQLAEALGMQTLAEGVESEEQLDFLAQAGCDVVQGYLTGR 1035 Query: 1090 AQ 1091 Q Sbjct: 1036 PQ 1037 >UniRef50_Q2VYM7 Predicted signal transduction protein containing a membrane domain n=3 Tax=Magnetospirillum RepID=Q2VYM7_MAGSA Length = 982 Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 169/609 (27%), Positives = 283/609 (46%), Gaps = 52/609 (8%) Query: 479 VLPEDRQHAEKVI-RDSLQSRSPFKLEFR----ITVKDGIRHIRALANRVLNKEGEVERL 533 V P DR+ +++ RDS+ ++ R I + + R + +R++ EG V+ Sbjct: 354 VDPADRERFREILARDSVVRNFEARVRTRSGEIIWIAENARAVYDGRDRLVCYEGTVQ-- 411 Query: 534 LGINMDMTEVKQLNEALFQEKERLHITL-DSIGEAVVCIDMAMKITFMNPVAEKMSGWTQ 592 ++T KQ E+L RL T+ +++GEA+V D +I +N E+M+GW Sbjct: 412 -----NITARKQAEESL-----RLAATVFETVGEAIVVTDRERRILAVNAAFERMTGWNA 461 Query: 593 EEALG--VPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITP 650 E +G LL V I + +E ++ + + + + ++T Sbjct: 462 AEMVGQTCDLLAVEMIGLRE----IEEMWRLAANTGQWSGETWTRRKESEPFPAALALTA 517 Query: 651 L---STLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTV 707 + + G + VL+++D+T R+ +++ + ASHDALT L NR + + L + Sbjct: 518 VDQGADAKGEDGRFVLLLRDITRKRRDEQRIRFHASHDALTRLPNRHTVMEALGEAIVRA 577 Query: 708 NSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGL 767 T +R A++++D++RFK +NDS GHA GD LLR++A + + +R+SDV+ RLGGDEF + Sbjct: 578 EQTGERLAVLYLDVNRFKDINDSYGHAVGDELLRQVARRLKACVRASDVIGRLGGDEFVM 637 Query: 768 LLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQAD 826 LLP + +A+ A +++ A + F EG G S GI L D+ A ++S+AD Sbjct: 638 LLPSVGDHTAAQACANKVLYAFAE-PFDMEGLQLFAGTSIGIALYPDDADGAESLLSRAD 696 Query: 827 IACYASKNGGRGRVTVYEPQQAAAHSERAAMSLD-------EQWRMIKENQLMMLAHGVA 879 A Y +K GG + ++ + +ER ++ D +Q+R++ + ++ L+ + Sbjct: 697 AAMYHAKRGGL-PYSCFDIEMDRQVAERVSLENDLRLALGEDQFRLVYQPKVDALSGAII 755 Query: 880 SPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVA 939 EA W ++ G I R+ L A+D V E +Q A+ A Sbjct: 756 G---AEALIRWRHPVRADVSPGLFI--PVAERA----GLIGAIDDWVLVEACRQVAEWRA 806 Query: 940 SKGI--SISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAI---LDHA-ESV 993 I SIS+ LS A L + L S LPP +L L I + +D A E + Sbjct: 807 QGLILPSISVNLSPAQFHDGRLKEKVKAALAGSGLPPSVLELEITETMMASDVDRAIEIL 866 Query: 994 QKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHA 1053 +L G R+ L G LK L +D + GN D +I + A Sbjct: 867 GQLTTLGVRVSLDDFGTGYSSLAYLKLFPVSTLKIDRAFVTELPGNAKDGAIIASVIALA 926 Query: 1054 QRLGMKTIA 1062 LG IA Sbjct: 927 GNLGFSVIA 935 >UniRef50_C6QR24 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QR24_9BACI Length = 842 Score = 155 bits (392), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 149/550 (27%), Positives = 250/550 (45%), Gaps = 52/550 (9%) Query: 544 KQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTV 603 K+ E L + ++ L S+GE V+ +D KITF+N AE++ G+ + E LG L Sbjct: 275 KKAEEELKKREKYLKTITSSLGEGVIVLDKDKKITFINQEAERLLGYQKNELLGKALFQK 334 Query: 604 LHITFGDNG------PLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGS 657 +H PL + R +E+D + + G + Y TP+ +G Sbjct: 335 IHCGSEHQCDSLRECPLCQTAELKKAYR--VEEDFFVR-KDGTLLPIAYVSTPMIDDNGE 391 Query: 658 NIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALV 717 IGSV+V +D+TE +K ++ Y A HDALT L NR ++L+ L+ + R A++ Sbjct: 392 VIGSVIVFRDITERKKYDEKIKYQAYHDALTDLPNRRYLIEKLKNELKKAEEHNSRIAIL 451 Query: 718 FIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLP--DCNVE 775 ++DLD FK +NDS GH GD LL+ +A L+M+ +ARLGGDEF +LL D N+E Sbjct: 452 YLDLDNFKNINDSFGHVMGDLLLKNVAQ-RLTMIHPDCFIARLGGDEFAVLLSGNDFNIE 510 Query: 776 SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNG 835 IA + I ++N E + + S GI++ + ++ AD+A Y +K Sbjct: 511 E---IACKTIQSLNQ-PIKLENKEVFITTSVGISVYPKDGDDEMTLIRHADMAMYDAKKK 566 Query: 836 GRGRVTVYEP---QQAAAHS----------ERAAMSLDEQWRMIKENQLMMLAHGVASPR 882 G+ + + Y QQ S ER +SL Q + ++ ++ +A Sbjct: 567 GKNQFSFYTAELEQQKIRKSKIEQLLRTAIERKEVSLCYQPIIDTVSKQIIGLEALARWN 626 Query: 883 IPEARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK 941 PE ++ + E G+I+ + + AL H + HE + Sbjct: 627 HPEIGDIPANEFIAVAEENGQIV---SLGKHILKTALQHL---KQLHE--------IGFD 672 Query: 942 GISISLPLSVAGLSS---ATLVNDLLE--QLENSPLPPRLL-HLIIPAEAILDHAESVQK 995 + +S+ LS+ L L++ LL+ +L+ S L + H+ + E + H ++Q+ Sbjct: 673 YLYVSVNLSLRQLRHHEFTALISQLLQKNKLQASHLEIEITEHIALSDEKCVIH--NIQE 730 Query: 996 LRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQR 1055 L+ G RI + G L+ D L +D +V N L + + A Sbjct: 731 LKDIGVRIAIDDFGVGCSSIGYLRTFSVDTLKIDKSFIFDVATNPNTAQLTSALITFAHN 790 Query: 1056 LGMKTIAGPV 1065 L ++ +A V Sbjct: 791 LNLQVVAEGV 800 >UniRef50_Q5P8Z7 Sensory box/GGDEF family protein n=3 Tax=cellular organisms RepID=Q5P8Z7_AZOSE Length = 1008 Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 176/716 (24%), Positives = 297/716 (41%), Gaps = 37/716 (5%) Query: 398 RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKR 457 R+ DGT +++ E +++ ++ +QL E LA+ +G WEW+L + W ++ Sbjct: 269 RNPDGT----LSKFEIFHDITPVKESRRQLAEATLLAH----VGYWEWQLPAGVLHWGEQ 320 Query: 458 MFELY-EIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRH 515 L P + P+ + V P+DR+ +++++ + EFR+ DG +R Sbjct: 321 TDRLLGHAPGKVTPSGATFLAHVHPDDRERVAGEFAGAVRNQCSYVSEFRLIRADGALRI 380 Query: 516 IRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMA- 574 RA + ++EG R+ G D+TE++ AL +ER I + + AV + Sbjct: 381 ARANGHLQYDREGRAVRVCGAIQDITELRATETALRNSEERFSIAMTAAPFAVAITRVED 440 Query: 575 MKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVL 634 + +N E GW +EE +G T + + + ++ L Sbjct: 441 GRFVEVNDKYELHFGWKREELIGK---TSVETNLWPDPESRQRWLEMLRQHGSVLDFETL 497 Query: 635 HC-RSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANR 693 C R+G V S + +DG + + D+T+ ++ ++ Y A HDALT L NR Sbjct: 498 GCERNGAVRQVSLSSRYID-IDGEK-HVLTFVHDITDRKEAQARIEYLAHHDALTGLPNR 555 Query: 694 ASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRS 753 F + + H + AL+F+DLD FK +ND+ GH GD LL+ +A + LR Sbjct: 556 VLFRDRFALATAWAERAHAKVALLFVDLDHFKTINDTLGHPVGDGLLQGVALRLRECLRE 615 Query: 754 SDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDD 813 +D ++RLGGDEF + L D A AT I F EG S GI + D Sbjct: 616 TDTVSRLGGDEFLIALTDIRDPQAINSATAKIFDTLTRPFELEGHELTNTMSIGIAIWPD 675 Query: 814 NNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMM 873 + ++ AD A Y +K GR Y Q A E+ + L EN + Sbjct: 676 DGEDFDTLLKNADTAMYQAKRAGRNTWRFYTEQMNANAVEQ--LQLRTALHSALENDEFL 733 Query: 874 LAHGVASPRIPEARN--LWLISLKLWSCEG-EIIDEQTFRRSFSDPALSHALDRRVFHEF 930 L + P+I A + + +L W + E++ F + + L + V E Sbjct: 734 LHY---QPQINLASGHVVGVEALLRWHWDKRELVPPDRFIPAAEESGLIVPIGDWVLREA 790 Query: 931 FQQAAKAVASK--GISISLPLSVAGLSSATLVNDLLEQLENSPLPP-------RLLHLII 981 QA + ++I++ LS L ++ L S L P L++ Sbjct: 791 CMQAVRWTRQGLPELTIAVNLSAVQFRRGDLERSVVRALSLSGLDPARLELELTESLLLV 850 Query: 982 PAEAILDHAESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLM 1041 E+++ E++++L+ G R+ + G LK D L +D ++ + Sbjct: 851 DTESVI---ETLRRLKSLGVRLSIDDFGTGYSSLAYLKRFAVDKLKIDQSFVRDIATDPD 907 Query: 1042 DEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 D ++ I A L ++ IA V + L D G A P D L Sbjct: 908 DAAIVRAIVSMAHTLKLQVIAEGVESEDIDRFLHIFNCDEAQGYHYARPMPGDALA 963 >UniRef50_B8GU61 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain n=2 Tax=Thioalkalivibrio RepID=B8GU61_THISH Length = 1076 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 183/782 (23%), Positives = 331/782 (42%), Gaps = 55/782 (7%) Query: 345 LTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTP 404 +T LT PED ++ +V++ ++ + ++S+ R R+G W + G Sbjct: 293 VTMGSLTHPEDRDRVWHEVQQALN-QRRSFSLSYRIVTRDGTPRWVQERGQGIHDEHGNL 351 Query: 405 LYFIAQIEDINEL-KRTEQVNQQLME----RITLANEAGGIGIWEWELKPNIF------- 452 L+ + D + L E + Q + TL + +++ E I+ Sbjct: 352 LFLQGHVIDASRLVAANEDLRHQRAALEAFKHTLDLTQDSVFMFDAETLEFIYVNRGAIK 411 Query: 453 ---SWDKRMFEL--YEIPPHI-KPNWQVWYECVLPEDRQ----HAEKVIRDSLQSRSPFK 502 + +F L Y+I P +P ++ + E + E R RD + Sbjct: 412 QLGYSAQELFTLHPYDIKPEFPEPRFRRFIEVLRTEKRDSLVFETLHRTRDGRDLQLEVS 471 Query: 503 LEFRITVKDGIRHIRALANRVLNKEGEVERLLGI-NMDMTEVKQ--LNEALFQEKERLHI 559 L++ + + R++ + KE E L + ++ ++E +Q L +E+ R+ Sbjct: 472 LQYVVLPDERPRYVAITRDISQRKEQEKSLLKALGDLQVSERRQTELLAITRREQSRMAA 531 Query: 560 TLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEA---LGVPLLTVL-HITFGDNGPLM 615 L + ++ D ++ ++NP +M W E +G P VL H T P Sbjct: 532 LLSGMSIGILFEDTNGRVEYVNPAFRRM--WAIGEPVDLIGRPSREVLKHSTHRLARPDH 589 Query: 616 EN---IYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESR 672 + ++ DT + +V L+ G S P++ DG +G + + +D+T R Sbjct: 590 ASRHILHVLDTHEISERFEVDLY---DGRVLTQLSY-PVADPDGPVLGRLWIYEDITRER 645 Query: 673 KMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAG 732 + +QL Y A HDALT L NR F++ L ++ + R AL++ DLD FK +ND+ G Sbjct: 646 QTAQQLIYMAQHDALTGLYNRHRFQEHLDRMISSAQRNDSRFALLYFDLDEFKYINDTFG 705 Query: 733 HAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYH 792 H AGD +L A + S++RS +V ARLGGDEF +L + + +A RI A++ Sbjct: 706 HRAGDTVLVRAAGEVSSLVRSGEVFARLGGDEFAVLAEIRHDDEPSQLAERIARAISAIP 765 Query: 793 FIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHS 852 F + G R+ AS GI ++ ++++ AD A Y +K+ G+ ++Y+P + + + Sbjct: 766 FRFRGSNLRLTASIGIAFFPEHGDNVEDLVAHADTAMYQAKSNGKNTWSLYDPSRNHSKA 825 Query: 853 ERAAMSLDEQWR-----MIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGE-IIDE 906 A M+ WR ++E L + G+ S E ++ + +GE +I Sbjct: 826 MMARMT----WRGRIDQALREESLELHFQGIYSTADGELSHVETLVRMRDPADGERLIMP 881 Query: 907 QTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLVNDLLEQ 966 F +DR V + AK + ++++ +S L + + Sbjct: 882 GQFIPVAEKTGQILEIDRWVLRQSIGLLAKHPKLRALAVN--ISGRSFDEPGLPQYIQDL 939 Query: 967 LENSPLPPRLLHLIIPAEAILDHAESVQK----LRLAGCRIVLSQVGRDLQIFNSLKANM 1022 L+ + PR L + + A + + Q+ L GC I L G F LK Sbjct: 940 LQRHDVEPRRLIVELTETAAVSEMQDAQRFIEALHQTGCLIGLDDFGSGFSTFAYLKYLG 999 Query: 1023 ADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLI 1082 L +DG ++ N ++ + + A+ L T+A V + L GVD+ Sbjct: 1000 VQILKIDGMFIRDLPNNRDNQAFVKAMIDVAKGLDKLTVAEFVEDAETLAMLREFGVDMA 1059 Query: 1083 YG 1084 G Sbjct: 1060 QG 1061 >UniRef50_A9GW14 Sensory box/GGDEF family protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GW14_SORC5 Length = 705 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 119/433 (27%), Positives = 200/433 (46%), Gaps = 22/433 (5%) Query: 684 HDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLREL 743 +DALT L +R + ++ L + + +AL +IDLDRF+ VN + GH AGD LL+ + Sbjct: 259 YDALTRLLDRYAIIDRIEEALNDCRANNTPYALCYIDLDRFRLVNATCGHEAGDDLLQWV 318 Query: 744 ASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVG 803 A+ + ++ D R+GGDEF LLL D N A IA + + ++ F W + +G Sbjct: 319 ATRVHEIVGPKDAAGRIGGDEFVLLLADKNEREAERIARDLQICLLEFRFGWAEKTFSIG 378 Query: 804 ASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQW 863 AS G+ ++ + +A +V+ AD AC +K GRGR+ VY Q S R+ + Sbjct: 379 ASIGLVVLTPHFERAVDVLGAADHACRIAKENGRGRLQVYLDDQQMTTSRRSMQWVASLQ 438 Query: 864 RMIKENQLMMLAHGV------ASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPA 917 R + E +L + + G+ + P + ++ +L +G ++ Sbjct: 439 RHLAEGRLRLYSQGIHPLIKPGAAHTPRGAHFEVLVRQLGE-DGRFYSPVGIIQAAEQSG 497 Query: 918 LSHALDRRVFHEFF-------QQAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLENS 970 L H +DR V + F Q A + + + S+ LS L L++ L+EQL + Sbjct: 498 LIHVIDRYVARQAFRLIGALPQHALRRLD----TCSINLSGVSLLREGLLDFLVEQLHRA 553 Query: 971 PLPPRLLHLIIPAEAILDHAESV----QKLRLAGCRIVLSQVGRDLQIFNSLKANMADYL 1026 +PP + I A L + V Q+L GCR + G + L++ DY+ Sbjct: 554 QVPPSKICFEITETAALANLGEVLWFMQELGAMGCRFAIDDFGSGHASYGYLESLPVDYV 613 Query: 1027 LLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEV 1086 +DG +++ N + ++ + LG+KT+A V + D L+ +G+ G Sbjct: 614 KIDGMFVRDLKDNSLHRAIVESVHRIGDTLGIKTVAEQVENQEIADLLTSMGIHYAQGWH 673 Query: 1087 IADAQPLDLLVNS 1099 QPL L S Sbjct: 674 FDKPQPLVDLCGS 686 >UniRef50_C4XHP1 Putative signaling protein n=2 Tax=Desulfovibrio magneticus RS-1 RepID=C4XHP1_DESMR Length = 893 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 126/535 (23%), Positives = 254/535 (47%), Gaps = 14/535 (2%) Query: 325 LQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRN 384 + N A + Y ++E+ G T +L +K + K++S + + E + Y+++ Sbjct: 357 IDVNNAFVEITRYQRDEVIGKTSDELNLFTSHDKYCDLL-KILSKDGQIKNSEAQIYDKD 415 Query: 385 GDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWE 444 G+V + ++ + G Y + DI E K+ E Q+L + E IGI+E Sbjct: 416 GNVHEGIFYGEII-ESQGQKFYLSVMV-DITERKQIETSLQKLKNKYKNLIENSPIGIFE 473 Query: 445 WELKPNIFSWDKRMFELYEIPPH---IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPF 501 + + + +Y I + + + E + D L++ + Sbjct: 474 STPNGKYLAANPSLARIYGYDSAEDLINRVSSIESDIYVNESERTQ---TTDQLKNCCLY 530 Query: 502 KLEFRITVKDG-IRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHIT 560 LE R KDG I + V +K G + G D+T+ K+ L + +E+ + Sbjct: 531 GLEQRRKRKDGTIAWVSLFMRSVRDKFGNINSYEGFVSDITDRKRAENELKESEEKFRLI 590 Query: 561 LDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYS 620 +++ + +V ++ +IT+ N + +K++G++++E + + ++ ++ G+ I + Sbjct: 591 VETSNQGIVAVNQYFEITYSNKIIQKLAGYSEKELHELHIDSIF-LSCGEE-SFSRTIIN 648 Query: 621 ADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSY 680 A T RS + + + + G + V +S +P+S LD S+ G+ ++I D++E + + L Sbjct: 649 A-TERSIPKLECRIRNKDGECFWVLFSSSPISRLDNSSGGAFIMITDISEQKNLELNLLM 707 Query: 681 SASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALL 740 A+ D LT ++NR F + LL + + ++ D+D FK VND+ GH+AGD +L Sbjct: 708 LATKDGLTGVSNRHHFMEISGALLSSATRYNTEFSVAIFDIDNFKMVNDTWGHSAGDMVL 767 Query: 741 RELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVH 800 +++ +L + RSSD++ RLGG+EF + +P+ ++E+A R + V F ++ Sbjct: 768 KKICTLATAEFRSSDIIGRLGGEEFAISMPETSLENAAAAVERFRTIVESTIFEYDEIPI 827 Query: 801 RVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGR-VTVYEPQQAAAHSER 854 + S+G+ + ++ AD Y +K GR + VT +Q + +R Sbjct: 828 NITISSGVAACSKHTKAIDCLLKSADNFLYKAKRHGRNQTVTSINAKQETDYPDR 882 Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 10/158 (6%) Query: 292 AERKHISES----ETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGY-SQEEL--RG 344 ERK I S + ++N +E S IG+ G++L N +L + GY S E+L R Sbjct: 444 TERKQIETSLQKLKNKYKNLIENSPIGIFESTPNGKYLAANPSLARIYGYDSAEDLINRV 503 Query: 345 LTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTP 404 + + + + + Q ++L + + Y +E+R ++G + W L + VR G Sbjct: 504 SSIESDIYVNESER-TQTTDQLKNCCL--YGLEQRRKRKDGTIAWVSLFMRSVRDKFGNI 560 Query: 405 LYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGI 442 + + DI + KR E ++ E+ L E GI Sbjct: 561 NSYEGFVSDITDRKRAENELKESEEKFRLIVETSNQGI 598 >UniRef50_A5PAA5 Sensory box/GGDEF family protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PAA5_9SPHN Length = 783 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 135/475 (28%), Positives = 220/475 (46%), Gaps = 18/475 (3%) Query: 630 QDVVLHCRSGGSYDVHY-SITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALT 688 +D+++ R G DV Y I+ DG G V +DVT R + ++++ A +D LT Sbjct: 279 RDLIVRLRVKG--DVRYWRISARPRDDGRMSG---VARDVTAGRLIEERVAFMAHYDNLT 333 Query: 689 HLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLML 748 LANR F ++LR L S AL ++DLD FKA+ND+ GH GD +LRE+ + + Sbjct: 334 GLANRYLFNERLRSLAGEQASRGSNIALFYLDLDDFKAINDTRGHLVGDRMLREVGTRLE 393 Query: 749 SMLRSSDVLARLGGDEFGLLLPDCNVESARFI--ATRIISAVNDYHFIWEGRVHRVGASA 806 +RS D++ARLGGDEF +L+ + I A R +S V + I EG +RV S Sbjct: 394 QEVRSEDLVARLGGDEFAVLI-ETRAGDGLLIERAHRFLSVVRAPYEI-EGHSYRVSTSV 451 Query: 807 GITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMI 866 G+ D + A E+M +AD+A YA+K GR + ++EP ER +D + + Sbjct: 452 GVARCTDGDCDAEELMRRADLALYAAKEKGRDNLALFEPALDRIARERRETEIDLREALT 511 Query: 867 KENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRV 926 + Q+ M + E L + L+ + + II F + + +L V Sbjct: 512 R-GQMRMHYQAIVDLDTGETTGLEAL-LRWYHPQRGIIPPGDFLTIAEETGMITSLGEWV 569 Query: 927 FHEFFQQAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAI 986 + AA + I+I+ LS + + LV + + + + + P + L I + Sbjct: 570 IRQTLSDAAALPGNFRIAIN--LSPTQVKNPNLVATVAQAIHATNIAPERVELEITEHVL 627 Query: 987 LDHAE----SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMD 1042 +D ++ +LR G RI L G L+ D + +D +V +L Sbjct: 628 MDQGAAGHVTLLRLRELGIRIALDDFGTGYSSLGYLRRFPFDRIKIDRTFVTDVASDLGS 687 Query: 1043 EMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 + +++ I A LGM T A + +D L +GV G +I P + +V Sbjct: 688 QAIVSTITRLADALGMDTTAEGIEDQRQLDLLRKLGVQEAQGFLIGRPVPPEEIV 742 >UniRef50_A4BCU3 Response regulator/sensory box/GGDEF domain/EAL domain protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BCU3_9GAMM Length = 723 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 107/316 (33%), Positives = 166/316 (52%), Gaps = 15/316 (4%) Query: 554 KERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGD-NG 612 ++R + L SIGE ++ + ++TF NPVA++ G +++E G +++ GD Sbjct: 156 EKRNQLLLKSIGEGILGLSTDGQVTFSNPVAQQTLGMSEQELEGRSFSDIVY--HGDAEQ 213 Query: 613 PLMENIYSADTSRSAIEQDVVLHCRSGGSYD-------VHYSITPLSTLDGSNIGSVLVI 665 PL+ Y +R A EQ H R G +D V Y TP+ +D G V+ Sbjct: 214 PLVTWEYLP--ARLACEQGQAYHERIGVFWDRAGQLLPVEYKATPM-MVDDDLAGIVIAF 270 Query: 666 QDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFK 725 QD+TE R+ QL+ A +DALT L NR +F L+ L Q AL+FIDLD+FK Sbjct: 271 QDITERRRTEEQLARLAQYDALTGLVNRNAFNGLLKKALSRSARHEQPLALLFIDLDQFK 330 Query: 726 AVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN-VESARFIATRI 784 +ND+ GH GD+LL+E+A + +R+ D++ RLGGDEF ++L + A ++ + Sbjct: 331 TINDNHGHEIGDSLLQEVAMRLTDCVRNGDIIGRLGGDEFVIMLESLQATKDAARVSQSV 390 Query: 785 ISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYE 844 + A+ + F G +GAS GI + D+ A E++ ADIA Y SK GR R + Sbjct: 391 LDAL-EAPFTIRGHQIFIGASIGIAVYPDSALTARELLRCADIAMYRSKEEGRNRYRFFT 449 Query: 845 PQQAAAHSERAAMSLD 860 + + E + +D Sbjct: 450 DEMQESVREALQLEID 465 >UniRef50_D1CH73 Sensor protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CH73_THET1 Length = 1363 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 73/140 (52%), Positives = 102/140 (72%), Gaps = 1/140 (0%) Query: 291 RAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQL 350 RAE + + ES F +A +++ IGMALV T+G+WL+ N +LC+ LGYS+ EL G+TFQ + Sbjct: 573 RAE-EALRESMELFVSAFDHAPIGMALVATDGRWLRVNPSLCRMLGYSERELLGMTFQDI 631 Query: 351 TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQ 410 T P+DL DLQ V +++ GEI Y MEKRYY+++G +VWALL+VSLVR DG PLYF++Q Sbjct: 632 THPDDLELDLQHVRQVLDGEIAQYEMEKRYYHKHGSIVWALLSVSLVRDLDGQPLYFVSQ 691 Query: 411 IEDINELKRTEQVNQQLMER 430 I+DI + K E+ + ER Sbjct: 692 IQDITQRKEIERAITESEER 711 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 90/360 (25%), Positives = 158/360 (43%), Gaps = 21/360 (5%) Query: 333 QFLGYSQEELRG--LTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWA 390 + GYS EL G ++ ++L PEDL + + +S Y +E R +R+G + + Sbjct: 359 EITGYSDAELLGGKVSLRELVHPEDLPAVTANL-RGVSSPGQRYRLEYRLRHRDGSLRFV 417 Query: 391 LLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPN 450 VR T+G PL + D+ + K EQ QQ+ R E GI++ L Sbjct: 418 EEYGQCVRVTEGMPL-LEGLLTDVTDRKHAEQAVQQVQRRYQDIFERISEGIFQTSLDGR 476 Query: 451 IFSWDKRMFEL--YEIPPHIKPNWQVWYECVL--PEDRQHAEKVIRDSLQSRSPFKLEFR 506 + + + + Y P + Q + P DR ++ +R L+ E Sbjct: 477 LLLANPALARMLGYASPEELLSEVQDVARQIYARPADR---DRYLRIMLEEGEVRDFELE 533 Query: 507 ITVKDGIRHIRALANRVLNKEGEVERLL-GINMDMTEVKQLNEALFQEKERLHITLD--S 563 KDG ++++R L E R++ G D+T+ K+ EAL + E D Sbjct: 534 AVRKDGEHIWLSISSRWLLDEARGMRIIEGTCQDITQRKRAEEALRESMELFVSAFDHAP 593 Query: 564 IGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPL-MENIYSA- 621 IG A+V D + +NP +M G+++ E LG +T IT D+ L ++++ Sbjct: 594 IGMALVATDG--RWLRVNPSLCRMLGYSERELLG---MTFQDITHPDDLELDLQHVRQVL 648 Query: 622 DTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYS 681 D + E + + + G S++ + LDG + V IQD+T+ +++ R ++ S Sbjct: 649 DGEIAQYEMEKRYYHKHGSIVWALLSVSLVRDLDGQPLYFVSQIQDITQRKEIERAITES 708 >UniRef50_Q1AT47 Multi-sensor signal transduction histidine kinase n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AT47_RUBXD Length = 640 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 73/161 (45%), Positives = 107/161 (66%), Gaps = 2/161 (1%) Query: 282 IMTMVMYAFRAERKH--ISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQ 339 ++ + YA ER + ESE FR E +A+G+A VG +G+WL+ N+ LC+ +GY++ Sbjct: 114 LVRSIRYAVERERAEEALRESEERFRATFEQAAVGIAHVGLDGRWLRVNQKLCEIVGYAR 173 Query: 340 EELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRH 399 EEL LTFQ +T+P+DL+KDL+ +L+ GEI TY+ EKRY+ ++G VVW L VSLVR Sbjct: 174 EELIELTFQDITYPDDLDKDLEHARRLLDGEIGTYAAEKRYFRKDGSVVWVHLTVSLVRD 233 Query: 400 TDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGI 440 GTP YFI+ +EDI KRTE+ ++ + + EAG + Sbjct: 234 PCGTPKYFISVVEDITGRKRTEERLRRTLNALLALYEAGRV 274 >UniRef50_A0KNI0 MorA n=2 Tax=Aeromonas RepID=A0KNI0_AERHH Length = 816 Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 185/776 (23%), Positives = 332/776 (42%), Gaps = 53/776 (6%) Query: 308 MEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT----------WPEDLN 357 E + G+ + + N+ L G S+EE G +++ + + ++ Sbjct: 27 FELAPFGIGVFDRHFRCRSVNQTLADLNGLSREEHYGRYLREIVPTLAPVLEPLFQQIIS 86 Query: 358 KDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINEL 417 + +VE +SG + +R+ W + ++ G P + + D+ Sbjct: 87 SGVPRVELNLSGHTAAHQGRQRH--------WQAIYSPML-DEQGVPDRILTIVRDV--- 134 Query: 418 KRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYE 477 TEQV Q +R+ LA AG IG+WEW + + +D ++ L +Q E Sbjct: 135 --TEQVEAQ--QRLQLAMSAGQIGVWEWHVTEDRLQFDGQVERLLGT---TASQFQGGME 187 Query: 478 CVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRH-IRALANRVLNKEGEVERLLGI 536 + + + R ++ +P L D +R + A+ V + + R+ G+ Sbjct: 188 QFIKRFDPLSGEQFRAAVNGTAPIHLTLGYLGPDQLRGWVDIHADHVAATDHQGRRITGV 247 Query: 537 NMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEAL 596 D T + L Q ++ ++ E ++ +D +I +NP M+ + + E + Sbjct: 248 IHDATSRCNQEDKLRQ----ANVVFETAAEGIIIMDGQRQIISVNPAFSSMTQYEEAEIV 303 Query: 597 GVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDG 656 G ++H + + ++ A +++ + GG + ++ + Sbjct: 304 GKSPEAIMHPRRHTD--IDYPWHTLLPGSHAWHGEMMCLRKDGGYFTSWQHVSAVHDSRH 361 Query: 657 SNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHAL 716 + V+ D++ RK QL++ A HD LT L NR +++L + L+T HQ+ AL Sbjct: 362 NTTNYVIAFSDISAIRKAEAQLNHLAYHDPLTELGNRNLLQERLELELKTAQLNHQQLAL 421 Query: 717 VFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNV-E 775 +FIDLD FK +ND+ GH AGD LL+ LA + +LR +DV ARLGGDEF +L+P + Sbjct: 422 LFIDLDGFKLINDTLGHRAGDELLKLLAERIRRVLRHNDVAARLGGDEFLVLIPFFERPQ 481 Query: 776 SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNG 835 +A ++++ + + + RV V AS GI L ++ ++S AD A Y +KN Sbjct: 482 ELERLAEQLLACLREPVELGHERV-AVSASIGIALYPEHATSPDTLVSAADSAMYEAKNR 540 Query: 836 GRGRVTVYEPQQAAAHSERAAMSLDEQ--WRMIKENQLMMLAHGVASPRIPEARNLWLIS 893 GR Y P ER +M EQ ++ I+++QL +L + + R L + Sbjct: 541 GRNGYLFYTPDMTEQTRERMSM---EQGLFKAIEQHQLCVLYQPMTE--LASNRMSGLEA 595 Query: 894 LKLWSCEGE-IIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISI---SLPL 949 L W E +I F + L + V QQ +A+ G+++ S+ + Sbjct: 596 LLRWQHPSEGMIGPTRFIPVAEECGLIEQIGEWVMRTACQQGQAWLAA-GLAVPRLSINV 654 Query: 950 SVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQ---KLRLAGCRIVLS 1006 SV + SA V + L + PP L + + I +S+Q +L+ G +I + Sbjct: 655 SVREMRSAGYVERVAAILAETGFPPEKLEIEVTESIIQRVDQSLQLFRRLKALGVQIAID 714 Query: 1007 QVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIA 1062 G + LK+ D + +D + + L I A LGM A Sbjct: 715 DFGTGFSSLSLLKSLPIDRIKIDRTFVQALPDDKHSRELCRTIINLADSLGMMVTA 770 >UniRef50_A8VU35 Putative metal dependent phosphohydrolase n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VU35_9BACI Length = 855 Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 121/450 (26%), Positives = 219/450 (48%), Gaps = 30/450 (6%) Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLAN-------EAGGIGIWEWELKPNIFSWD 455 T ++A I D++ + EQ +RI E G WEW++ N + + Sbjct: 232 TGRKWVASIRDVSAEVKAEQERLDYQDRIYHQRRRMEYILEGTNAGTWEWDMISNRVTVN 291 Query: 456 KRMFEL----YEIPPHIKPNWQVWYECVLPEDRQH-AEKVIRDSLQSRSPFKLEFRITVK 510 +R E+ +E W + + PED + + K+ R + S +++E RI + Sbjct: 292 ERWAEMKGYRFEDVDTFDMGW--FLSLIHPEDHEALSRKLARVNEGSMPVYEIEMRIRHQ 349 Query: 511 DGIRHIRALANRVLNKEGEVERLL--GINMDMTEVKQLNEALFQEKERLHITLDSIGEAV 568 G ++L + E +L G ++D+T+ K E+E+ TL SIG+ V Sbjct: 350 KGHYIWIEARGKILERSENGEPILMSGTHLDITKRKVEEIEREMEREQFKTTLLSIGDGV 409 Query: 569 VCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMEN-IYSADTSRSA 627 + D A ++T MN +AE +GW EA + V + D+G + + + A S++ Sbjct: 410 ITTDAAGRVTMMNRMAESTTGWQLHEAKNRKIEEVFKLVHADSGEEIASPVQMAIESQAK 469 Query: 628 IE--QDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHD 685 +E +D+ L +SG VH S+ P+ + +G G+V+V +D++E + ++Q+ Y + HD Sbjct: 470 VELGEDIQLIKKSGEKCFVHDSVAPIYSGEGILTGTVIVFRDISEKYEQVKQIRYLSDHD 529 Query: 686 ALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELAS 745 LT + NR +E RI+++ + +++ D++ K ND GH GD LL E Sbjct: 530 QLTGMYNRHYYE---RIMMEIEKNPPANLSVIVADVNGLKLANDGFGHQFGDRLLEETGR 586 Query: 746 LMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRV--G 803 ++ + +RS +++AR+GGDEF +LLP N + A+ + +N +G+V + Sbjct: 587 ILENEIRSGEIVARIGGDEFVILLPGVNEKEAKKRMETLHEKLN------KGKVDDIYLS 640 Query: 804 ASAGITLIDDNNHQAAEVMSQADIACYASK 833 S G + +D ++ EV +A+ Y K Sbjct: 641 VSLGFSSLDPSDSHIEEVFKRAEDRMYRKK 670 >UniRef50_C0N2C6 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N2C6_9GAMM Length = 763 Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 141/568 (24%), Positives = 246/568 (43%), Gaps = 19/568 (3%) Query: 538 MDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALG 597 +D++ KQ+ + LFQ+ E L+I L S+ E V+ D +TF+NP AE ++GW E LG Sbjct: 184 VDISHEKQVEQNLFQQNEYLNIILSSVDEGVIATDTRGLVTFINPKAELITGWKTSEVLG 243 Query: 598 VPLLTVLHITFGDNGPLMENIYSADTSRSAIEQ---DVVLHCRSGGSYDVHYSITPLSTL 654 + V+ + + EN + I + + L + G + + PL + Sbjct: 244 HSIEEVVQLRDPETKVNTENPIRVCLRQHRITRMPLNTQLVSKDGRLSQIEQTAAPLRDV 303 Query: 655 DGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRH 714 DG G+V VI D+++S + S ++S+D LT++ NR ++L++ V ++ R Sbjct: 304 DGKLSGAVAVIHDISQSISLSLLRSQASSYDQLTNVPNRIFIREKLQLACDAVKASDMRM 363 Query: 715 ALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNV 774 A+ ID+D FK+ ND+ G+ GDA+L+ LA + + + RLG DEF ++ D + Sbjct: 364 AMAVIDVDYFKSFNDAHGNGTGDAVLKSLARRLFENYEPGNSIGRLGADEFMVIFRDIDD 423 Query: 775 ESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKN 834 + + F E + + S G+++ID ++ +VM QAD A Y +K Sbjct: 424 NDGIDTTLHALLDLLRTPFRVEDTSYSLSVSIGVSVIDAYCNEPDQVMQQADAALYRAKF 483 Query: 835 GGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISL 894 G V+ + + +R + + +I +L + P++ A + +I + Sbjct: 484 EGGDVYRVFTKELEVSLLQRRSTEELLRRSLINTEKLEVFYQ----PKVDLATS-QVIGV 538 Query: 895 ----KLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAK-AVASKGISISLPL 949 +L G+I+ F + L L V Q + I +S+ + Sbjct: 539 EALARLRDDSGKIVSPIEFIPIAEETGLIIQLGNLVLERACQDCYEWNQKGHKIPVSVNI 598 Query: 950 SVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAIL----DHAESVQKLRLAGCRIVL 1005 S LVN + ++ S L P LL L + A + D E +L+ G I + Sbjct: 599 SAVQCLHNDLVNTIETSMQTSGLEPALLELEVTETAFIRDFEDTLEKFHQLKQIGISISI 658 Query: 1006 SQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPV 1065 G+ L+ D L LD + N D ++ I Q + + IA + Sbjct: 659 DDFGKGYSNLTYLRRLEVDKLKLDMSYVRGMLENPRDYEIVKTIINLGQSMNLDIIAEGI 718 Query: 1066 VLPLVMDTLSGIGVDLIYGEVIADAQPL 1093 D L +G YG+ A+PL Sbjct: 719 ETEFHRDALLKLGCQ--YGQGYYYAKPL 744 >UniRef50_D2XIQ4 Putative signal transduction protein n=1 Tax=uncultured bacterium 9F08 RepID=D2XIQ4_9BACT Length = 965 Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 155/583 (26%), Positives = 262/583 (44%), Gaps = 31/583 (5%) Query: 529 EVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMS 588 E+ R ++ +E +Q Q + + LD+ +A++ +D ++TF NP A + Sbjct: 247 EIGRERQLHQMASETQQALHQARQLGQEQQMILDAAADAIIGLDNRGRVTFSNPAATALF 306 Query: 589 GWTQEEALGVPLLTVLHITF-GDNGPLMEN-----IYSADTSRSAIEQDVVLHCRSGGSY 642 G++ EE G L ++H+ G+ P E + S E L + G Sbjct: 307 GYSAEELQGEDLHALIHLCKEGEAHPREECGLWRLLRFGGQYHSGHE---TLRHKDGTPL 363 Query: 643 DVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRI 702 V + + + G IG+VL +D++E ++L A +D LT LANR + +L+ Sbjct: 364 PVEMNGSAIDDEKGVVIGAVLTFRDISERLSYEQELERRAHYDELTGLANRVLLKARLQ- 422 Query: 703 LLQTVNSTHQRH----ALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLA 758 QT H RH A++F+DLD FK VND GH GD LL +A + +++R +D +A Sbjct: 423 --QTTAQAH-RHGKSVAVLFLDLDHFKIVNDGLGHDCGDRLLVAIAQRLQTVVREADTVA 479 Query: 759 RLGGDEFGLLL--PDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNH 816 R GGDEF ++L PD N E A I R++ + + +I E ++ AS G++L + Sbjct: 480 RHGGDEFVIVLSEPD-NGEDAAEIGRRLLQRIAEPVWIDEHELYTT-ASVGVSLFPRDGT 537 Query: 817 QAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAH 876 ++ AD A Y +K+ GR + Y + + S+R M L + + ++ N+L + H Sbjct: 538 DVDTLLRNADAAMYRAKHLGRNNLQFYSEEMNLSLSKRLRM-LSQLRQAVERNELCL--H 594 Query: 877 GVASPRIPEARNLWLISLKLWS-CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQ-- 933 +P R L + +L W E ++ F + L + V E +Q Sbjct: 595 YQPQASLPGGRLLGVEALVRWQHPELGMVSPAEFIPLAEESGLIEPIGEWVLREACRQGV 654 Query: 934 AAKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAIL-DHAES 992 A + IS+ LS + L + + + LE + L P L L + A++ + +S Sbjct: 655 AWDRAGFMPLRISVNLSARQFDNPKLDDTIRDVLEQTGLAPERLELELTETALIANPQQS 714 Query: 993 VQKL---RLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITII 1049 VQ+L R G R+ L G L+ D + +D A+ N + ++ + Sbjct: 715 VQRLSAIRDLGVRLALDDFGTGYSSLAYLQRYTFDLIKIDRSFVADAIRNPGNAAIVRTV 774 Query: 1050 QGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQP 1092 A+ LG +TIA + L G D + G I+ P Sbjct: 775 IAMARLLGSETIAEGAETAETITFLGRNGCDAVQGYYISRPLP 817 >UniRef50_A3QHP3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Shewanella loihica PV-4 RepID=A3QHP3_SHELP Length = 731 Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 136/465 (29%), Positives = 216/465 (46%), Gaps = 14/465 (3%) Query: 643 DVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRI 702 D +T L L G + +++++ V E + S S + D LT L NRA FE Sbjct: 260 DAQAKVTFL-CLSGEDGPILMLVEPVGEPVQESEAHSVSLNFDPLTGLPNRAYFEA---- 314 Query: 703 LLQTVNSTH-QRHALV-FIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARL 760 L N +R V FI+LDRF+ VN+ +GH AGD LL +LA+ + ++R DV+ARL Sbjct: 315 LYDLANPCQCERSTFVGFINLDRFQVVNNVSGHRAGDQLLCQLAARLSQLVRKEDVIARL 374 Query: 761 GGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAE 820 GDEFG+L+P+ +V+ A +A RI A+ ++ F WEGR H V S G+ + ++ Sbjct: 375 SGDEFGILMPNIDVQIAEQVAERICQAMANHEFSWEGRSHSVSVSMGLARCESEVDSVSD 434 Query: 821 VMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVAS 880 ++ +A AC +K G Y Q MS N L + Sbjct: 435 LLRRASAACRLAKEKGGNAWYFYSTQDPVVEKLNTEMSASVDIVGALANDRFELFYQPIE 494 Query: 881 PRIPEARNLWL-ISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVA 939 P L L I L++ S EGE+I F + L+ LDR V + + ++ +A Sbjct: 495 PLYASDDGLHLEILLRMRSTEGELIPPGIFLPAAERFNLAAKLDRWVIDKLLRWGSENLA 554 Query: 940 S-KGIS-ISLPLSVAGLSSATLVNDLLEQLENSP-LPPRLLHLIIPAEAI--LDHAES-V 993 + +S +S+ LS +S + +N L +L P L +L I A+ LDHA + Sbjct: 555 LWQSLSMVSVNLSALSISDSEFINWLEMRLLGEPELVSKLCFEITETAAVSQLDHATGLI 614 Query: 994 QKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHA 1053 ++ GC++ L G F LK DY+ +DG+ ++ + D+ ++ I Sbjct: 615 NTVKPLGCKLALDDFGSGFSSFAYLKLLDVDYVKIDGQFIQHLCEDRADQAIVAAICQLG 674 Query: 1054 QRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 + + + +A V V L +GV+ G IA + L L + Sbjct: 675 RDMAFEIVAEFVESVEVAKHLQKLGVEFGQGYGIARPESLTSLTS 719 >UniRef50_C1D6C2 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D6C2_LARHH Length = 1113 Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 212/892 (23%), Positives = 380/892 (42%), Gaps = 69/892 (7%) Query: 194 SLLTLAITLTLSWLSMLYLPWPFTFI--------IVLLMWSAVRLPRMEAFLIFLTTVMM 245 ++LT+ + +SW + +L P + + L++W+A+RL + L+ L V+ Sbjct: 193 AVLTIGV---VSWSAAAWLEGPAPLVSQLVSFGFVPLVVWTAIRLTLRDVGLLTLLAVLP 249 Query: 246 VSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFR 305 ++ A P+ L S ++ LL+L + R R+ + + R Sbjct: 250 FYVLGVA-PAGLEQIGLATGSGTGFVVMLLVLYLHDSEQQRHRQERLRRQEMRQLRRAQR 308 Query: 306 NAMEYSA--IGMALVGT---EGQWLQTNKALCQFLGYSQEELRGLTFQQL-TW--PEDLN 357 + + +A I A+V T + + N+AL + GY + G T ++ W P+D + Sbjct: 309 DIILQAADMIPSAVVLTRLSDQTIVYANEALARLFGYPRASFIGRTSLEMGIWNNPDDRH 368 Query: 358 KDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINEL 417 + L ++ + N + R D + + R T G Y + DI++L Sbjct: 369 ELLARMHAPVPQPFNCWM-------RRADGTRFCIELQSSRVTWGDSAYMLTVAHDIDQL 421 Query: 418 KRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPH---IKPNWQV 474 R E + + I A IG + +L + + M E+ P + P Q Sbjct: 422 VRAESLARDGERSIKEALARAQIGYVDLDLARDRAVGNSVMAEMMGYPDDGAVLSPIPQD 481 Query: 475 WYECVLPEDRQHAEKVIRDSLQSRSPFK-LEFRITVKDGIRHIRALANRVLN-KEGEVER 532 W V P+DR R+ + R+P LEFR+ R + A + +G R Sbjct: 482 WIGRVHPDDRDMVRLRYRNLMAGRAPIDGLEFRLEHDRDWRWVMATLVPIETLPDGRALR 541 Query: 533 LLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQ 592 +LG+ +D+T +L+ A + + H+ + +AV+ D A ++ N ++++GW Sbjct: 542 VLGVYVDVT---RLHLATAELRLAAHVQ-EHTPDAVLICDAAGRLLKANRAMQRLTGWAP 597 Query: 593 EEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLS 652 E ++ D L + Y + + E + SG +P+ Sbjct: 598 E--------VLVEELLAD---LRSDAYPVPPANRSWEGECHYRTLSGVPLACWQRQSPVL 646 Query: 653 TLDGSNIGSVLV-IQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTH 711 G N+ +LV + +++E ++ ++ Y A HD+LT L NRA+ ++L +L Sbjct: 647 DEYG-NLSYLLVTLSELSERQRQEARIRYLAEHDSLTGLYNRAALIERLGDVLAQARRQP 705 Query: 712 QRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD 771 A++++DLDRFK +ND+ GH AGDALL E+A + S++R+ D + R+GGDEF +LL Sbjct: 706 HVGAVMYLDLDRFKQINDTLGHEAGDALLIEVARRIRSVVRTGDAVGRMGGDEFVVLLAR 765 Query: 772 CNV-ESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACY 830 A +A ++++A+ + F+ G+ AS G+ + + A ++ AD A Y Sbjct: 766 LEYPRDAAAVADKLLAALLE-PFVLSGQRVESPASIGVAMFPQDGEDADTLLRHADAAMY 824 Query: 831 ASKNGGRGRVTVYEP---QQAAAHSERAAMSLD--EQWRMIKENQLMMLAHGVASPRIPE 885 K GRGR + Q A R AM E+ + E QL+ + V P E Sbjct: 825 DVKTQGRGRWQFFTSALQSQVANRRAREAMLTRALERREFVLEYQLIY-GNPVREPLAME 883 Query: 886 ARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK--GI 943 A W + GE + Q F D L+ L R QQ A + + + Sbjct: 884 ALLRWH------TPAGERLPAQAFIDLAEDMRLALRLTRYTLDLVGQQLAGWLEAGLVPV 937 Query: 944 SISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQK--LRLA-- 999 +++ L+ LV + E L L + + + A+ E +K RLA Sbjct: 938 PVAINLTSRQFHDPLLVTHVAETLREHRLDGQWIEFEVAESALFADLEQSRKQLARLAEL 997 Query: 1000 GCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQG 1051 G + + + G D++ + L + ++ + A + GN M ++ QG Sbjct: 998 GVGVAVDRFGGDIRRWFELADAPLTRIKVECSVLAELSGNDRGRMALSAWQG 1049 >UniRef50_B7GKR7 Multidomain signal transduction protein (Contains PAS, GGDEF and EAL domains) n=2 Tax=Bacillaceae RepID=B7GKR7_ANOFW Length = 594 Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 140/553 (25%), Positives = 251/553 (45%), Gaps = 32/553 (5%) Query: 558 HITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVP---LLTVLHITFGDNGPL 614 H + E ++ D I NP E ++G+TQEE LG L + LH + Sbjct: 42 HTIIQEADEGIIVTDSEGHILLANPAFETVTGYTQEEVLGKKPNILRSGLH-----DRKF 96 Query: 615 MENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKM 674 EN++ + ++ ++G + +I + + G+ V + DVT+ ++ Sbjct: 97 YENMWETIRDHGVWKGEIWNKRKNGELFVEWLTIKAVYDVAGNPTHYVAIFSDVTQHKRT 156 Query: 675 LRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHA 734 + QL+ +++D LT++ NR F K+L+ LL T +Q+ A++F+DLDRFK +ND GH Sbjct: 157 MEQLARLSNYDLLTNVPNRQLFTKRLQHLLDTARRYNQQLAILFLDLDRFKYINDELGHY 216 Query: 735 AGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHF 793 +GD LL+++A+ + +LR+ D LAR+GGDEF ++LP +++ A IA +II ++ Sbjct: 217 SGDILLQKVANRLKKLLRTKDTLARIGGDEFVVILPKLKDIQEAVSIAEQIIESLQAPFL 276 Query: 794 IWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSE 853 + ++ + AS GI++ ++ ++ +AD A +K GR R +Y A + Sbjct: 277 LHHKDIY-ISASIGISVYPNDGDDGEMLLRRADRAMQKAKESGRNRFELY---TAKLDYQ 332 Query: 854 RAAMSLDEQWRM-IKENQLMMLAHGVASPRIPEARNLWLISLKLWSCE--GEIIDEQTFR 910 ++L+ R I+ N+L + + + + + L +L W G + Q Sbjct: 333 SEVVTLENYLRKAIERNELFVCYQPIVNIKTKKIEALE--ALMRWKQPNIGFVSPAQ--- 387 Query: 911 RSFSDPALSHALDRRVFHEFFQQAA---KAVA--SKGISISLPLSVAGLSSATLVNDLLE 965 F A L + F+QA KA+ + + I + +S V L Sbjct: 388 --FIPLAEETGLIVPMTKWLFEQACVHIKAIHQFAPHVKIGINISAVHFQQDDFVQQLST 445 Query: 966 QLENSPLPPRLLHLIIPAEAILDHA-ESVQK---LRLAGCRIVLSQVGRDLQIFNSLKAN 1021 ++ + PR L + I+ +A ESVQK L+ G ++ + G + L Sbjct: 446 IVKKHDVHPRFFKLELTESTIMPNAEESVQKLVQLKQCGFKLAIDDFGTGFSSLSYLHRF 505 Query: 1022 MADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDL 1081 D L +D + D +++ I A L + +A V + L+ D+ Sbjct: 506 PIDILKIDQSFIRRLSLYSDDATIVSTIIMMAHHLHLSVVAEGVETEQQYEFLNKQQCDM 565 Query: 1082 IYGEVIADAQPLD 1094 G IA P+D Sbjct: 566 AQGYYIAKPMPID 578 >UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U434_9DELT Length = 1051 Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 109/366 (29%), Positives = 176/366 (48%), Gaps = 12/366 (3%) Query: 484 RQHAEKVIR---DSLQSRSPF-KLEFRITVKDGIRHIRALANRV--LNKEGEVERLLGIN 537 R+H E +R D + +SPF K+E R +DG R I ++ V + EG G + Sbjct: 686 REHTEDFLRWRADLYRLQSPFSKVELRCLTRDG-RAIWLQSSGVPHFDDEGGFRGYRGAD 744 Query: 538 MDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALG 597 MD+T+ K A+ + +L +S +A+V IDM +F N AE++ G+T+EE +G Sbjct: 745 MDITDRKDAENAIKASERKLRALAESAYDAIVMIDMHGNASFWNRAAERLFGYTEEEVMG 804 Query: 598 VP---LLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTL 654 P L+T + + + S D Q+ + G V S++ Sbjct: 805 RPIHELITPPELRDEAMAGMRQFAGSGDGDAVGAIQETEALRKDGTRVSVERSVSSFQL- 863 Query: 655 DGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRH 714 G +V I+D+TE + +L A+ D+LT L NR F + Sbjct: 864 -GGRWYAVATIRDITERKATEARLHELATTDSLTGLFNRRRFMELAEREFMRTKRYQGAL 922 Query: 715 ALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNV 774 ++ +D+D FK VND+ GH GD +LRELA + + LR D+L RLGG+EFG+LLP+ + Sbjct: 923 TMLMMDIDHFKRVNDTHGHGVGDEVLRELARISRTALRELDILGRLGGEEFGVLLPETDA 982 Query: 775 ESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKN 834 A +A R+ A+ + R+ S G +++ ++ +AD+A Y +K Sbjct: 983 GPAMEVAQRLRRAIEKASMATDAGTLRITVSIGAATSNNDAETVETLLKRADVALYEAKQ 1042 Query: 835 GGRGRV 840 GR +V Sbjct: 1043 SGRNKV 1048 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 92/412 (22%), Positives = 162/412 (39%), Gaps = 35/412 (8%) Query: 296 HISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPE- 354 + ESE + + G+ ++ + + N A + LGY+ +E+ G L PE Sbjct: 379 RLRESEERTLAISQSAQDGIVMIDDQDRVTYWNPAAERLLGYTAQEIMGRRLHPLLVPEP 438 Query: 355 ---DLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 L G + +E ++ +V LAVS V+ Y + + Sbjct: 439 QQDKAESGLAGFAASGRGAVVGQVIELEAVRKDSSIVPVELAVSSVKLKG--RWYAVGTL 496 Query: 412 EDINELKRTEQ-VNQQLMERITLANEAGGIGIWEWELKPN--IFSWDKRMFELYEIPPHI 468 D+ KR E + + TL N + + ++PN I + ++ +YE P Sbjct: 497 RDMTRRKRYEAALRRSEQTSRTLLNAPEDLAML---IEPNGRIAAINETGARIYERTPED 553 Query: 469 KPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEG 528 + ++ + + R+ ++ ++ P + E DG R A A V +G Sbjct: 554 MIGRSL-FDFLSDKRREALRTILSQVMEQAGPVRFEGE---HDG-RRFHASAYPVTGPDG 608 Query: 529 EVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMS 588 VE++ D+TE ++ AL + ++R ++GE + D TF+ + Sbjct: 609 AVEQMAVFARDVTEQRKAQAALKRSEQRFRDVSAAVGEYIWETDGRDTFTFVTEDVFSIL 668 Query: 589 GWTQEEALG-VPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHC--RSGGSYDVH 645 G+TQEE LG P L V D ++Y + S +E L C R G + + Sbjct: 669 GYTQEEMLGQTPALFVAREHTEDFLRWRADLYRLQSPFSKVE----LRCLTRDGRAIWLQ 724 Query: 646 YSITPLSTLDGSNIGSVLVIQDVTE----------SRKMLRQLSYSASHDAL 687 S P +G G D+T+ S + LR L+ SA +DA+ Sbjct: 725 SSGVPHFDDEGGFRGYRGADMDITDRKDAENAIKASERKLRALAESA-YDAI 775 >UniRef50_A6TT69 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TT69_ALKMQ Length = 1242 Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 126/535 (23%), Positives = 243/535 (45%), Gaps = 23/535 (4%) Query: 350 LTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIA 409 L PED + + G+ Y +E R +G + + D + + Sbjct: 324 LIHPEDQDTVQNSTAGCLKGK--AYEIEYRIIGLDGSEKCVISKGEPIFDDDQVVIGILG 381 Query: 410 QIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIP-PHI 468 I+DI E K + ++ + + A +G WE ++ N +W + + +Y I Sbjct: 382 TIQDITENKLLKTQLEKSYKNLAEAQRLAKMGSWEMDVIRNKNTWSEEYYHIYGITNKEY 441 Query: 469 KPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLNKE 527 +++ + V PEDR+ E ++ Q + PF +EFRI DG +RHI + + E Sbjct: 442 DGSYEAFLNFVHPEDRELIEDILAHPPQVQ-PFDMEFRIIRPDGSVRHIYQVVEMTFDLE 500 Query: 528 GEVERLLGINMDMTEVKQL-------NEALFQEKERLHITLDSIGEAVVCIDMAMKITFM 580 G + GI D+TE K L E + ++R + + + + I ++ Sbjct: 501 GHLTYRRGIIQDITERKALVKKMQGIQENINHIQKRFQVLIRDSSDVFEIVSPDGTIEYI 560 Query: 581 NPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSR--SAIEQDVVLHCRS 638 +P EK+ G+ +E G L+ + P +E ++ S I++++ + Sbjct: 561 SPAVEKILGYQPKEMEGRNLM---EFAWEIEKPKLEKMFKVALSEPNKNIKREISAETKL 617 Query: 639 GGSYDVHYSITPLSTLDGSNI-GSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFE 697 G ++ +T + L+ +I G VL +DVTE + +++++ A+HD +T L NR FE Sbjct: 618 GKR--IYVELTMNNQLEEPSIKGIVLNWRDVTERVEAQKKMNHIATHDQMTQLPNRLHFE 675 Query: 698 KQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVL 757 K++ Q A++ +D+D FK +ND+ G GD L+ + A + L + + Sbjct: 676 KKIEYQCQEAKEKGTTFAVMMLDIDDFKYINDALGMGFGDQLITQAARRLKDFLGETRCI 735 Query: 758 ARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNH 816 R GD+FG+L+ + ++E+ + IA +II + I ++ + S G+ + D+ Sbjct: 736 CRYSGDQFGILIYNLKDIEAYKNIAMKIIDLFSSSFKIDPYEIY-ITMSVGVAIYPDDGQ 794 Query: 817 QAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQL 871 + ++ +IA + +K G+ R +Y P+ + + + D + R IK N+ Sbjct: 795 ETQSLIKHGNIALFRAKEAGKNRYEMYSPKMDVKNYKAFTLKNDLR-RAIKNNEF 848 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 70/351 (19%), Positives = 147/351 (41%), Gaps = 24/351 (6%) Query: 353 PEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIE 412 PED + +EK + G N + E R G + ++ P+ I I+ Sbjct: 200 PEDQQVVRKSMEKALRG--NDHDQEYRIMVPGGKEKYIHSRAEVLFDDMNRPIKMIGTIQ 257 Query: 413 DINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPH-IKPN 471 DI K E +++ + + A + G+G + ++L SW + ++ ++ + P Sbjct: 258 DITGRKLIENDLKRIGKDLNHAQKVAGVGSYRYDLGNEELSWSEEVYRIFGVDPQKFTKR 317 Query: 472 WQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGI-RHIRALANRVLNKEGEV 530 ++ + PED+ + L+ ++ +++E+RI DG + + + + + + V Sbjct: 318 FENIITLIHPEDQDTVQNSTAGCLKGKA-YEIEYRIIGLDGSEKCVISKGEPIFDDDQVV 376 Query: 531 ERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAM----KITFMNPVAEK 586 +LG D+TE K L K +L + ++ EA M I N +E+ Sbjct: 377 IGILGTIQDITENKLL-------KTQLEKSYKNLAEAQRLAKMGSWEMDVIRNKNTWSEE 429 Query: 587 ---MSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYD 643 + G T +E G L+ ++ L+E+I + + + + R GS Sbjct: 430 YYHIYGITNKEYDG-SYEAFLNFVHPEDRELIEDILAHPPQVQPFDMEFRI-IRPDGSVR 487 Query: 644 VHYSITPLS-TLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANR 693 Y + ++ L+G +IQD+TE + +++++ + + H+ R Sbjct: 488 HIYQVVEMTFDLEGHLTYRRGIIQDITERKALVKKM--QGIQENINHIQKR 536 Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust. Identities = 82/407 (20%), Positives = 163/407 (40%), Gaps = 46/407 (11%) Query: 313 IGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEIN 372 I A+ +G ++ N++ C L ++G T + PE+ + + VE+L GE Sbjct: 34 IASAVCDVKGLIIEANESFCHLLEDIAPNVQGKTIFEFLKPEETDVEFTYVEELHKGESI 93 Query: 373 TYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERIT 432 T + + G + + ++R ++ + I D+ + + E+ QL E + Sbjct: 94 TIKSD-LFTQTKGIRNIEMTILPVLRKQTLIGMHIV--ILDLTKGMKLEKSLNQLRENVF 150 Query: 433 LANEAGGIGIWEWELKPNIFSWDKRMFELYE-IPPHIKPNWQVWYECVLPEDRQHAEKVI 491 + IG W ++ + + ++++++ + Y + PED+Q K + Sbjct: 151 YGQKLLSIGSWTYDFQSEELFGSQEVYDIFQRTTEEFDNKIESVYTFIHPEDQQVVRKSM 210 Query: 492 RDSLQSRSPFKLEFRITVKDGI-RHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEAL 550 +L+ + E+RI V G ++I + A + + +++G D+T K + L Sbjct: 211 EKALRG-NDHDQEYRIMVPGGKEKYIHSRAEVLFDDMNRPIKMIGTIQDITGRKLIENDL 269 Query: 551 FQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFG- 609 + + L+ G D+ E++S W++E ++ FG Sbjct: 270 KRIGKDLNHAQKVAGVGSYRYDLG---------NEELS-WSEE----------VYRIFGV 309 Query: 610 DNGPLMENIYSADTSRSAIEQDVVLH----CRSGGSYDVHYSI--------------TPL 651 D + + T +QD V + C G +Y++ Y I P+ Sbjct: 310 DPQKFTKRFENIITLIHPEDQDTVQNSTAGCLKGKAYEIEYRIIGLDGSEKCVISKGEPI 369 Query: 652 STLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDA-LTHLANRASFE 697 D IG + IQD+TE++ + QL S + A LA S+E Sbjct: 370 FDDDQVVIGILGTIQDITENKLLKTQLEKSYKNLAEAQRLAKMGSWE 416 >UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Clostridium thermocellum RepID=A3DCG7_CLOTH Length = 862 Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 142/534 (26%), Positives = 247/534 (46%), Gaps = 30/534 (5%) Query: 550 LFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFG 609 L ++ E L ITL SIGEAV+ D +TF N +KM G ++EE LG L +L Sbjct: 292 LRKQHEWLRITLSSIGEAVITTDENGTVTFSNYEIQKMLGLSEEEILGKKLDKLLSGLVD 351 Query: 610 DNGPLMENIYSADTSRSA---IEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQ 666 + + +R + +E D+ L GG V ++ P+ IG+V+ ++ Sbjct: 352 KREKVYKIPIEEVVNRGSMIKLETDLSL-VTPGGRRLVEGTVAPIRNDSDVIIGTVVALK 410 Query: 667 DVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKA 726 D+TE +K L +D LT L NR+ F +L++ L ++ AL+ +DLD FKA Sbjct: 411 DITEIKKKDEILYNMEYYDPLTGLPNRSLFSDRLKMALAQSKRNNEMCALIILDLDNFKA 470 Query: 727 VNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARFIATRII 785 +ND+ GH+ GD LL+++A + LR D +AR+GGDEF ++ P ++ A A RI+ Sbjct: 471 INDTLGHSVGDMLLKQVAEKIKGYLREVDTVARIGGDEFIIIQPQIKDINDATRAADRIL 530 Query: 786 SAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEP 845 +I EG+ + + AS GI + + + AD A Y +K GR +Y Sbjct: 531 KKFQQ-PWILEGKEYYITASMGIGIYPNGGEDPQTIFKNADTALYRAKELGRNNYQLY-- 587 Query: 846 QQAAAHSERAAMSLDEQ---WRMIKENQLMMLAH---GVASPRIPEARNLWLISLKLWSC 899 + +++ LD + R I++ + ++ + + +I L L+ + Sbjct: 588 --TESMNQKVLQRLDIENSLRRAIEKEEFVLFYQPQIDIKTGKIVGFEAL----LRWYHP 641 Query: 900 EGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGIS---ISLPLSVAGLSS 956 + ++ F D L + V +Q K + G+ IS+ LS Sbjct: 642 DYGLMPPMEFIPVAEDSGLIVVIGEWVLETACRQNKKWIEC-GLEPHLISVNLSARQFQR 700 Query: 957 ATLVNDLLEQLENSP-LPPRLLHL-IIPAEAILDHAESV---QKLRLAGCRIVLSQVGRD 1011 + +V ++++++ +S L P LL L I + A+ D + ++ +LR G R+ L G Sbjct: 701 SNIV-EVIDRIRSSTGLAPELLELEITESTAMQDLSFTIDVLNQLRKKGIRVSLDDFGTG 759 Query: 1012 LQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPV 1065 N L+ D L +D +++ N +E + + A +L + +A V Sbjct: 760 YSSLNYLRQLPIDTLKIDKSFVQDIRANSKEEAIAKTVISLAHKLDLTVVAEGV 813 >UniRef50_Q3J907 Diguanylate cyclase/phosphodiesterase n=2 Tax=Nitrosococcus oceani RepID=Q3J907_NITOC Length = 1201 Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 121/434 (27%), Positives = 202/434 (46%), Gaps = 34/434 (7%) Query: 672 RKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSA 731 +K ++Y A+HD LT L NR FE+Q L + Q + L+++DLD+FK +N + Sbjct: 768 QKFHSHIAYEATHDPLTGLVNRKEFEQQANRALAKADHEAQSYVLLYLDLDQFKIINSTC 827 Query: 732 GHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDY 791 G+ AGDALL+E+ASL+ L +LARLG ++FG+LL C+ + IA + A++++ Sbjct: 828 GYEAGDALLKEIASLLTEFLPDGGILARLGDNQFGVLLNQCSHDEGCEIAEQQRIAIDNH 887 Query: 792 HFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAH 851 +W + VGAS G+ + + AA ++ +A+ AC +K GR R+ E Sbjct: 888 RLVWNNKRLSVGASIGLVSVSEQKCDAAVLLQRAEAACMEAKEAGRNRIQACEFDDEEFR 947 Query: 852 SERAAMS----LDEQWRMIKENQLMMLAHGVASPRIPEARNL-----WLISLKL------ 896 + +DE ++++ +L + + P A +L + I L+L Sbjct: 948 RRHGMIEWVARIDE---VLEDGRLQLWCQRI----TPIADHLEMEPHYEILLRLRDQDGR 1000 Query: 897 WSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAA--KAVASKGISISLPLSVAGL 954 W GE I F + A+D+ V F+ A K + I++ LS L Sbjct: 1001 WIAAGEFIQTAEFYHRMA------AIDQWVIQSAFRWMADHKERLEQLGGIAINLSGQSL 1054 Query: 955 SSATLVNDLLEQLENSPLPPRLLHLIIPAE---AILDH-AESVQKLRLAGCRIVLSQVGR 1010 + LV + + + +PP+ + I A L H A+ ++ ++ GC L G Sbjct: 1055 NDRRLVTFIKREFARTGVPPQRVCFEITETAGVANLSHSAQLIEAVKDLGCHFSLDDFGS 1114 Query: 1011 DLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLV 1070 L ++ LK DYL +DG ++ + D ++ I +G K IA V + Sbjct: 1115 GLSSYSYLKNLPVDYLKIDGAFVKDIATSPSDYAVVKSINEIGHFMGKKVIAEFVESKAI 1174 Query: 1071 MDTLSGIGVDLIYG 1084 + L IGVD G Sbjct: 1175 LAKLQEIGVDFAQG 1188 >UniRef50_A4XP68 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Pseudomonas mendocina ymp RepID=A4XP68_PSEMY Length = 1254 Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 178/730 (24%), Positives = 311/730 (42%), Gaps = 66/730 (9%) Query: 398 RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKR 457 R DG+ + ++DI+E KRTE ++ ER+ L EA IG+ L F W++ Sbjct: 545 RDDDGSLVRVYGVVQDISERKRTESQLRERDERLRLFFEAPLIGM---ALTTQSFGWEEV 601 Query: 458 MFELYEIPPHIKPNWQV--WYECVLPEDRQHAEKVIRDSL-QSRSPFKLEFRITVKDGIR 514 +L I + W++ P+D + + + L S F+++ R DG Sbjct: 602 NQKLCSILGRSRDELMASSWHQLSHPDDLAGEQARLEEVLLGSSDGFEMDKRFLRADGQV 661 Query: 515 HIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMA 574 L+ R + + L + ++ T ++ EA R H ++ EA++ Sbjct: 662 VFTRLSLRAVRGGAGRQTLFLLLVEDTSARREAEA------RYHTLVEHAPEAILLFSPE 715 Query: 575 MKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVL 634 I N A ++ + +E+ LG + ++ D S+ T R +++ + Sbjct: 716 GGIVECNENALQLLRYRREDLLGKTIQSISPPRQADGS------LSSRTGREHLQRAIAG 769 Query: 635 HC-------RSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDAL 687 R + + L + G + + D++E ++ R++ A D L Sbjct: 770 DTPVFEWTHRDSAGRQLPCEVR-LVRMPGEELLIRASVLDISERQRYQREIERLAYSDEL 828 Query: 688 THLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLM 747 T L NR +L+ + N AL+FIDLD FK VNDS GH GDALL E+ + + Sbjct: 829 TGLPNRRLLLDRLQHAMDRENREGSLGALLFIDLDHFKTVNDSLGHLIGDALLCEVTTRL 888 Query: 748 LSMLRSSDVLARLGGDEFGLLL------PDCNVESARFIATRIISAVNDYHFIWEGRVHR 801 LR+ D LARLGGDEF +LL P E A + +++ + I EG Sbjct: 889 ARELRTEDTLARLGGDEFVVLLEALGSEPQAVAEHAAAVGEKLLRGLQGSCLI-EGHELA 947 Query: 802 VGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLD- 860 + AS GI L +AA+++ QAD A Y +K+ GR + + P+ AA +R + + Sbjct: 948 ISASIGIALHPLGLQRAADILKQADTAMYRAKHAGRNALHFFAPEMQAAIDQRLQLQGEL 1007 Query: 861 ------EQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFS 914 +Q +++ + QL++ VA E WL + GEI +Q F Sbjct: 1008 RQAIARQQLQLVFQPQLVLADDTVAG---AEVLLRWLHPER-----GEISPDQ-----FI 1054 Query: 915 DPALSHALDRRVFHEFFQQAAKAVAS-----KGISISLPLSVAGLSSATLVNDLLEQLEN 969 A L + + +Q+ +A + +++ LS L A V + + L Sbjct: 1055 PLAEETGLIQDIGQWVLEQSCATLARWQAQWPQLVLAVNLSPRELRQAGCVARVEDCLRR 1114 Query: 970 SPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADY 1025 +P + L L I +L+ + ++Q+L+ G R + G LK D Sbjct: 1115 HGVPAQALELEITEGVLLEDVDRCIGNMQQLKAQGVRFAIDDFGTGYSSLTYLKRLPLDR 1174 Query: 1026 LLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIA----GPVVLPLVMDTLSGIGVDL 1081 L +D A++ G+ ML+ I A+ L ++ +A P L L+ + +G Sbjct: 1175 LKIDRSFVADLDGDASGRMLVQTILMIARNLDLECVAEGIEQPSQLALLREQGCALGQGY 1234 Query: 1082 IYGEVIADAQ 1091 ++G+ + +A+ Sbjct: 1235 LFGKPMVEAE 1244 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 48/157 (30%), Positives = 79/157 (50%), Gaps = 8/157 (5%) Query: 292 AERK----HISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTF 347 +ERK + E + R E IGMAL W + N+ LC LG S++EL ++ Sbjct: 562 SERKRTESQLRERDERLRLFFEAPLIGMALTTQSFGWEEVNQKLCSILGRSRDELMASSW 621 Query: 348 QQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYF 407 QL+ P+DL + ++E+++ G + + M+KR+ +G VV+ L++ VR G F Sbjct: 622 HQLSHPDDLAGEQARLEEVLLGSSDGFEMDKRFLRADGQVVFTRLSLRAVRGGAGRQTLF 681 Query: 408 IAQIEDINELKRTEQVNQQLMER----ITLANEAGGI 440 + +ED + + E L+E I L + GGI Sbjct: 682 LLLVEDTSARREAEARYHTLVEHAPEAILLFSPEGGI 718 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 78/353 (22%), Positives = 149/353 (42%), Gaps = 41/353 (11%) Query: 235 AFLIFLTTVMMVSLMMAADP--SLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRA 292 A L+F T+ + ++ DP ++L PR+ L L +LL +V A Sbjct: 249 AVLVFAATLPLP--LLRGDPGFAMLDLPRSQLQ--------LAVLLLMGAALLVGRALGD 298 Query: 293 ERKHISESETHFRN------AMEYSAIGMALVGTEGQWLQ---TNKALCQFLGYSQEELR 343 R+ +S S + AME S +G+ + L N A Q GYS +E Sbjct: 299 LRQALSRSARMQQQLARANLAMEASPLGVTIADARQPDLPLVYCNAAFTQITGYSADETL 358 Query: 344 GLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGT 403 G + L + +LQ + + + +++ R Y ++G W + ++ +R G Sbjct: 359 GRNCRFLVADDHAQLELQPLRSALREGRSGHAV-VRNYRKDGRPFWNEVVLAPMRDERGI 417 Query: 404 PLYFIAQIEDINE----LKRTEQVNQQLMER---ITLANEAGGIGIWEWELKPNIFSWDK 456 +F+ +D+ E + EQ QL+ + + + +G W +EL + W Sbjct: 418 S-HFVGLQQDVTERVELAAQVEQQRAQLLRQNHLFSQTEDIANLGGWVFELGDSSMFWSD 476 Query: 457 RMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSR----SPFKLEFRITVKDG 512 + + E H+ P +E L ++ +I ++LQ+ +E R+ + G Sbjct: 477 GCYRIVERDIHLGPP---SFEQALHYYDAPSQTLIIETLQAALGGLDEVDVELRLAARLG 533 Query: 513 IR--HIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDS 563 R +R +A R + +G + R+ G+ D++E K+ L + ERL + ++ Sbjct: 534 GRLVRVRGMAER--DDDGSLVRVYGVVQDISERKRTESQLRERDERLRLFFEA 584 >UniRef50_A1VAH5 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Desulfovibrio vulgaris RepID=A1VAH5_DESVV Length = 572 Score = 152 bits (383), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 145/534 (27%), Positives = 242/534 (45%), Gaps = 38/534 (7%) Query: 322 GQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKD--LQQVEKLISGEINTYSMEKR 379 G ++ N+A C F G+ E L + + L +D L + +G N +SM R Sbjct: 47 GGIVEANRAACAFYGHPFERLCTMFIDDINM---LQRDEILARRRAAATGLANRFSMPHR 103 Query: 380 YYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGG 439 G+V L+ V + L+ + + D+ E R + + ER+ L + Sbjct: 104 LAT--GEVREMLVHSHPVMVGERQLLFSV--VHDVTECSRMGEALRSREERLELVASSAT 159 Query: 440 IGIWEWELKPNIFSWDKRMFELYEIPPH-IKPNWQVWYECVLPEDRQHAEKVIRDSLQSR 498 +G+W+W+++ S + L P + W E + DR + L+ R Sbjct: 160 LGLWDWDVRTGRLSVNPGWVALLGFPAGWTQRGIDDWMERIHHADRNRVLTALNAHLEGR 219 Query: 499 SP-FKLEFRITVKDGIRHIRALAN--RVLNKE--GEVERLLGINMDMTEVKQLNEALFQE 553 + ++ E+RI DG +R + + RV+ ++ G R++G+ MD+T + E+ Sbjct: 220 TDRYEAEYRI--HDGGDALRWVHDQGRVVRRDAVGVPARVIGLFMDVTARRYAEES---- 273 Query: 554 KERL-HITLDSIGEAVVCI-DMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDN 611 + RL ++LD ++CI D + +NP GW E L L + H D Sbjct: 274 RARLFELSLD-----MLCILDFEGRFHEVNPAWNSTLGWMVSEMLETSLGGLTH--EADA 326 Query: 612 GPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTES 671 + + + +V L C G + +S P ++ I V++DVT Sbjct: 327 TAVAQALDQLAAGERVRGLEVRLRCSDGTWRWLSWSARP--EVEQRRI--YAVVRDVTHQ 382 Query: 672 RKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSA 731 ++ +L AS DALT ++NRA+F + L ++Q +++ +D+D FK VND+ Sbjct: 383 KRQEVELRRMASMDALTGVSNRATFMETLADMMQRCCHDRAVASVLVMDVDNFKLVNDTW 442 Query: 732 GHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDY 791 GHA GD +LR L M+ +LR+ D + RLGG+EFG+LLP E+A +A R+ +A+ Sbjct: 443 GHAVGDEVLRRLGRAMVPLLRTVDTVGRLGGEEFGVLLPGVGPEAACCVAERLRAAIAAM 502 Query: 792 HFIWE---GRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTV 842 + G RV S G+ H EV+ AD A Y +K GR RV Sbjct: 503 EVPCDDGRGEALRVTVSVGVASC-PPYHSVTEVLRAADKALYRAKASGRDRVVC 555 >UniRef50_A0RLD3 Diguanylate cyclase/phosphodiesterase n=79 Tax=cellular organisms RepID=A0RLD3_BACAH Length = 910 Score = 152 bits (383), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 122/461 (26%), Positives = 209/461 (45%), Gaps = 61/461 (13%) Query: 637 RSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASF 696 + G Y +H ++ P + ++ +G + +D+T + +Q+ + A HDALT L NR F Sbjct: 438 KEGYYYYLHITLIP-TFINKEVVGMFGIARDITTLYEKQKQVEHLAFHDALTGLPNRRKF 496 Query: 697 EKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDV 756 EK L+ +L T ++ A++F+DLDRFK +ND GH GD LL E+A + LRS DV Sbjct: 497 EKDLKNILNTAQASANDVAVMFLDLDRFKKINDRLGHGIGDLLLIEVAKRLRGCLRSKDV 556 Query: 757 LARLGGDEFGLLLPDCNVE-SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNN 815 +AR GGDEF +LLPD E SA FIA +I++ +N FI + + + S GI + D Sbjct: 557 VARQGGDEFTILLPDMYSEKSAAFIAEQILNILNKPFFIKDEEL-SITPSIGIAMYPDCG 615 Query: 816 HQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLA 875 E+M AD+A Y +K G+ R + + + A +E + E + +++N+ + Sbjct: 616 TDVTELMKNADMAMYRAKANGKNRFVFFSKEMSIAQNESNFLE-GELSKALQQNEFFLEY 674 Query: 876 H------------------------GVASPR--IPEARNL-WLISLKLWSCEGEIIDEQT 908 G+ SP IP A ++I L W ++ Sbjct: 675 QPQVSTKTKQIIGFEALIRWKHPKLGIVSPAQFIPLAEETGFIIELGNWILRTACLEA-- 732 Query: 909 FRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLE 968 + + + SH + + + LSV + A L+ + + LE Sbjct: 733 --KRWHNQGFSH----------------------LKVGVNLSVVQFNHADLIPTISKVLE 768 Query: 969 NSPLPPRLLHLIIPAEAILDHAESV----QKLRLAGCRIVLSQVGRDLQIFNSLKANMAD 1024 + L P L + I ++ +SV ++L+ G +I + G L + Sbjct: 769 ETELKPEALDIEITESIAINQNQSVVAKLEQLQNLGIQISIDDFGTGYSSLAYLTKYPIN 828 Query: 1025 YLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPV 1065 L + E + + ++E +I+ I ++ L ++ IA V Sbjct: 829 TLKIAREFICGITTSPLEEAIISSIITLSKELNLEVIAEGV 869 >UniRef50_Q4C8S6 PAS:GGDEF n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4C8S6_CROWT Length = 906 Score = 152 bits (383), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 111/414 (26%), Positives = 197/414 (47%), Gaps = 24/414 (5%) Query: 475 WYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIR--HIRALANRVLNKEGEVER 532 W + + P++R+ A K + + R PF +++R +DG+ I A R + +G+ + Sbjct: 283 WLDVIHPDERELARKRFLEFNEKRQPFSIDYRFRRRDGVYCWGIDAGKPR-FSADGQFKG 341 Query: 533 LLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQ 592 +G MD+++ K++ E L + + + + ID +N + + Sbjct: 342 YIGSVMDISDRKRMEEQL----RIFECIVATTQDMMALIDQNYTYQIVNDAYARNFQRAK 397 Query: 593 EEALGVPLLTVLHITFGDN-GPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPL 651 EE +G ++ ++ F D P ++ + R D+ R H +P Sbjct: 398 EEIIGKSVVEIVGEEFMDTIQPHLDRCLQGEEVRYETWFDLGEEQRY-----YHALYSPY 452 Query: 652 STLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTH 711 + +V+ I D+T+ ++ ++L Y A HD LT+L NR +L +Q Sbjct: 453 REANKGVTSAVVNIHDITQIKESEQKLYYQAHHDTLTNLPNRMLMNTRLEQSIQQATRKG 512 Query: 712 QRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD 771 + A+VFIDLDRFK +NDS GH AGD+LL +LA + R SD +AR+ GDEF ++L D Sbjct: 513 DKLAVVFIDLDRFKNINDSLGHRAGDSLLEQLAQRLCQQRRKSDTVARISGDEFVVILED 572 Query: 772 C-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACY 830 + + A + +++ + FI EGR ++ +S G++L D+ A ++ AD A Y Sbjct: 573 IKDTQHAGMVVGKLMRTFEE-PFIIEGRTIKMTSSMGLSLFPDDGTDVATLLRNADAAMY 631 Query: 831 ASKNGGRGRVTVYEPQQAAAHSE--------RAAMSLDEQWRMIKENQLMMLAH 876 +K GR Y + + E R A+ E + ++ + Q+ ML+H Sbjct: 632 RAKEDGRNTYCFYRKEMTSTVFEYMLLENALREALKKKE-FYLLYQPQIEMLSH 684 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 62/248 (25%), Positives = 106/248 (42%), Gaps = 13/248 (5%) Query: 441 GIWEWELKPNIFSWDKRMFELYEIPPH-IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRS 499 G WE+++ W + + ++ + P + Q + PED +H +K ++D + Sbjct: 115 GSWEFDVVTEKVFWSEEVERIWGMEPGTFRGELQQVQGAIHPEDVEHWQKNVQDCREKGK 174 Query: 500 PFKLEFRITVKDGIRH-IRALANRVLNKEGEVERLLGINMDMTEVKQLN------EALFQ 552 ++E+RI D H ++AL + + +G V RLLGI MD+TE KQL E + Sbjct: 175 EHRIEYRIIHPDASIHWVQALGSAEKDDQGNVIRLLGIVMDITERKQLELEHKETEMALR 234 Query: 553 EKERLHITLDSIGEAVVCI-DMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDN 611 E E L + +V + D T+++ SG + ALG L V+H D Sbjct: 235 ESEALFRNMADHAPVMVWVTDETGYSTYVSQSWYDFSGQKEGTALGFGWLDVIH---PDE 291 Query: 612 GPLMENIY-SADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTE 670 L + + R D R G + P + DG G + + D+++ Sbjct: 292 RELARKRFLEFNEKRQPFSIDYRFRRRDGVYCWGIDAGKPRFSADGQFKGYIGSVMDISD 351 Query: 671 SRKMLRQL 678 ++M QL Sbjct: 352 RKRMEEQL 359 >UniRef50_C6WVC8 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVC8_METML Length = 737 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 132/481 (27%), Positives = 225/481 (46%), Gaps = 31/481 (6%) Query: 380 YYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGG 439 Y +NG + L V+ + G ++ DI+ K+ EQ + + E Sbjct: 272 YIRKNGTSLPVSLTVTPMYDNTGELFGYLGVAHDISLRKQAEQETSYMAGILERTGELAK 331 Query: 440 IGIWEWELKP-NIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSR 498 +G WE+++ I W +F ++E+ P P+ + PE R+ E I + Q+ Sbjct: 332 VGGWEFDIASMQIKHWTTEVFRIHELDPPQLPSLEQAMTFYPPESRRELEATIDQATQTG 391 Query: 499 SPFKLEFRITVKDGIRHI--RALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKER 556 P+ +E T G +HI R + ++ ++G+ L+G D+T K + AL ++ Sbjct: 392 MPWDMELPFTTAKG-KHIWVRTQGSAIM-RDGKATSLIGAFQDITSQKTVENALKTREKS 449 Query: 557 LH--ITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDN--- 611 + I IG A+V ++ + T +N + G++ EE + LT ITF D+ Sbjct: 450 FNDIIEYAPIGMAIVSLEG--RFTRVNQALCNIVGYSSEELMQ---LTFQEITFPDDLEA 504 Query: 612 -----GPLMEN-IYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVI 665 L+E+ I + T + I +D + V S++ D + + I Sbjct: 505 DLERVSQLIEDKISTYQTQKRYIHKDKRIVW-------VQLSVSISRDQDRTPKYLIAQI 557 Query: 666 QDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFK 725 +D+TE + + A HD LT+L NR +L L ++ AL+F+DLD FK Sbjct: 558 EDITERKYQHEEAEQFAYHDPLTNLPNRRMLLSRLHHALMQTERFYRAMALMFLDLDHFK 617 Query: 726 AVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD-CNVESARFIATRI 784 +NDS GH GD LL+E+A+ +L +RS D ++R GGDEF ++L + + E A +A +I Sbjct: 618 NINDSLGHDVGDMLLKEVANRLLKCVRSIDTVSRHGGDEFVIVLSEISHTEDAELVAQKI 677 Query: 785 ISAVNDYHFIWEGRVHRVGASAGITLID-DNNHQAAEVMSQADIACYASKNGGRGRVTVY 843 I++ + I G + S GI + + +A E+M AD A Y +K GR R + Sbjct: 678 IASFKEPILI-NGHEIMMSTSIGIAVSKHEKPTKADELMKHADKAMYEAKGAGRNRYCFH 736 Query: 844 E 844 + Sbjct: 737 D 737 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 62/135 (45%), Positives = 89/135 (65%) Query: 301 ETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDL 360 E F + +EY+ IGMA+V EG++ + N+ALC +GYS EEL LTFQ++T+P+DL DL Sbjct: 447 EKSFNDIIEYAPIGMAIVSLEGRFTRVNQALCNIVGYSSEELMQLTFQEITFPDDLEADL 506 Query: 361 QQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRT 420 ++V +LI +I+TY +KRY +++ +VW L+VS+ R D TP Y IAQIEDI E K Sbjct: 507 ERVSQLIEDKISTYQTQKRYIHKDKRIVWVQLSVSISRDQDRTPKYLIAQIEDITERKYQ 566 Query: 421 EQVNQQLMERITLAN 435 + +Q L N Sbjct: 567 HEEAEQFAYHDPLTN 581 >UniRef50_Q3JW35 EAL/GGDEF domain protein n=50 Tax=pseudomallei group RepID=Q3JW35_BURP1 Length = 806 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 155/570 (27%), Positives = 261/570 (45%), Gaps = 48/570 (8%) Query: 565 GEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHIT--------------FGD 610 G+ V+ A ++ +NP AE++ G ++ G PL++ L ++ G Sbjct: 236 GDGVIFTGRAGRVECLNPAAERLIGMLADDCRGRPLVSTLRLSRTATSASSGAFAASAGL 295 Query: 611 NGPLME-NIYSADTSRSAIEQ----DVVLHCRSGGSYDVHYSITPLSTLDG-----SNIG 660 + P + S D +E D L+ GG+ V + + ++ G G Sbjct: 296 DAPDSPGSAASPDAPLGDLEDGGSCDATLYRADGGAIAVRATASSIAPPPGHARRACGSG 355 Query: 661 SVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFID 720 VLV++ + +++R+L++ +HD LT LA+RA FE+ + L + AL+F+D Sbjct: 356 RVLVLKSLATEHELVRRLAWQTTHDPLTGLASRAEFERHVGFALAA--DVREPVALLFVD 413 Query: 721 LDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFI 780 LDRF+ VND+ G+AAGDA+L LA+ ++S S+DV+ARLGGDEF +LL + SA Sbjct: 414 LDRFRIVNDTCGYAAGDAMLAALAARLVSCAASADVVARLGGDEFCVLLDARDEASAVSA 473 Query: 781 ATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNH--QAAEVMSQADIACYASKNGGRG 838 A R+ ++V+ + F+W+G+ V AS G+ L+ + + + A IAC +K GR Sbjct: 474 AERLRASVDGFVFVWDGQPFSVTASVGVALLGGPGRAPRVEDAVRLAGIACDVAKARGRN 533 Query: 839 RVTVYEP--QQAAAHSE--------RAAMSLDEQWRMIKENQLMMLAHGVASPRIPEAR- 887 RV + +P + A H R A+ D+ +R+ + + G +P AR Sbjct: 534 RVQLADPHDHELAHHISDVSWCARVRQALEYDD-FRLYVQPIVDTATQGATG--LPRARR 590 Query: 888 -NLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISIS 946 L L L EG + F R+ L +DR V A+ + + + Sbjct: 591 GELLLRMGALGEREG-VAPPGLFIRAAERYGLVTDIDRWVVRTVLDALARTRSRRFSEYA 649 Query: 947 LPLSVAGLSSATLVNDLLEQLENSPLPPRLLHL-IIPAEAILDHAESVQ---KLRLAGCR 1002 + LS + ++ +LEQ + + P L+ I AI + A +++ +L+ GCR Sbjct: 650 INLSGISIGDERFLDYVLEQFARTRVAPALICFEITETAAIANLAGALRFMHELKALGCR 709 Query: 1003 IVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIA 1062 L G + + LK +YL +DG + + ++ I + KTIA Sbjct: 710 FALDDFGSGMASLSYLKQLPVEYLKIDGSFVTGIANDAASLDIVASINDIGHAMNCKTIA 769 Query: 1063 GPVVLPLVMDTLSGIGVDLIYGEVIADAQP 1092 V + L+ +GVD G I P Sbjct: 770 EYVDSAATLQKLAALGVDYAQGYYIGRPVP 799 >UniRef50_C8R1Y2 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R1Y2_9DELT Length = 603 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 126/438 (28%), Positives = 196/438 (44%), Gaps = 17/438 (3%) Query: 666 QDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFK 725 +++ E R M +L + HD LT L NR+ E L + L + + AL+++D+D FK Sbjct: 152 KELAERRVMEARLKHRVGHDELTGLPNRSQLEGALELALIRAQNFQRSGALLYLDVDHFK 211 Query: 726 AVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRII 785 +ND+ GH +GD LL +A ++ + + R+GGDEF +LL + E +A + Sbjct: 212 LLNDTEGHESGDKLLTGVAGVLRRRVLPRHLAVRIGGDEFAVLLENTTTEDVLKLAEELR 271 Query: 786 SAVNDYHFIWEGRVHRVGASAGITLIDDNNH-QAAEVMSQADIACYASKNGGRGRVTVYE 844 +++Y F + +GAS G+ L+ QA E++S+AD AC+ +K GR RV Y+ Sbjct: 272 ELLHEYRFEGCLGCYNLGASIGVALMSPGESLQAGELLSRADQACHVAKRRGRNRVHCYD 331 Query: 845 PQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLIS----LKLWSCE 900 P+ E + D W + L + + I AR+ ++L Sbjct: 332 PED----PEVVGLKRDATWVPMLRQALRNGSFALEFQPIVRARDGACCHYEALIRLLE-N 386 Query: 901 GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKG---ISISLPLSVAGLSSA 957 G++ F S L H LD V + A ++G I +S+ LS L + Sbjct: 387 GKMYSPGEFIPSAERMGLIHQLDLWVVEAAVDRLAAMPLTEGQEPIRLSINLSAYALRNP 446 Query: 958 TLVNDLLEQLENSPLPPRLLHLIIPAEAILDH----AESVQKLRLAGCRIVLSQVGRDLQ 1013 L+ L +LE + L PR L I + E V+++R GCR L G Sbjct: 447 VLMPLLERKLEMTGLSPRRLMFEITETTAVTQLKQARELVERMRSLGCRFALDDFGSGFS 506 Query: 1014 IFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDT 1073 FN LK D L +DG N+ N DE+L+ + A L + IA V Sbjct: 507 TFNYLKHFPVDMLKIDGSFVVNMLKNPTDELLVRSMVELAHSLDKQVIAEFVEDEATARR 566 Query: 1074 LSGIGVDLIYGEVIADAQ 1091 L IGVD + G + Q Sbjct: 567 LREIGVDYLQGFYLGRPQ 584 >UniRef50_Q3IEE0 Putative orphan protein; putative conserved domain n=3 Tax=Alteromonadales RepID=Q3IEE0_PSEHT Length = 1002 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 159/566 (28%), Positives = 263/566 (46%), Gaps = 40/566 (7%) Query: 525 NKEGEVERLLGINMDMT-EVKQLNEALFQ---EKE-------RLHITLDSIGEAVVCIDM 573 NK+ E+ L G DMT E+++L + L Q EKE RL + G VV D Sbjct: 406 NKD-EIGTLNGSFKDMTIEIRKLIDGLNQRIIEKEIAEKAARRLSKAVAFSGTGVVITDK 464 Query: 574 AMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVV 633 I ++NP +M+ +++E PLL+++ + L+++I SR+ D + Sbjct: 465 NFVIEYVNPKMLEMTSFSEEHFNRAPLLSIIA---SEMAILIDDIDVDLRSRNCWRGDTL 521 Query: 634 LHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVT---ESRKMLRQLSYSASHDALTHL 690 + + V SI+P+ DG+ V QD++ ES++ + QL+Y D LT L Sbjct: 522 IESNNKAPIWVSLSISPIREDDGTITSYVASAQDISFVKESQRKMEQLAY---FDTLTGL 578 Query: 691 ANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSM 750 ANR F QLR + H AL + DLD FK +ND+ GH AGD LL E+A+ + Sbjct: 579 ANRTFFRMQLRKSMALAERGHYAFALFYFDLDEFKRINDTLGHNAGDQLLVEVANRLKQR 638 Query: 751 LRSSDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGIT 809 LR+ D +ARLGGDEF +LL + E A +A I +N+ + V + AS GIT Sbjct: 639 LRAEDTIARLGGDEFAILLSGIEHQEHATQVANTIQKTLNEPIQLGSNEV-IISASIGIT 697 Query: 810 LIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKEN 869 + ++ + +++ AD+A Y +K GR Y + A +ER + +E + IK+ Sbjct: 698 MAPYDSQEEDQLLKHADLAMYEAKAKGRNTFHFYSQELNTAANERLFIE-NELRQAIKDK 756 Query: 870 QLMMLAHGVASPRIPEARNLWLI---SLKLW--SCEGEIIDEQTFRRSFSDPALSHALDR 924 QL + P+I ++R ++ +L W EG I + F L L Sbjct: 757 QLTVYYQ----PQI-DSRTQLVVGYEALLRWFHPTEGAIAPTK-FIPIAEATGLIVELGE 810 Query: 925 RVFHEFFQQAAK-AVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPA 983 V H+ A K + +I++ LS A+L+ L + + ++ + + LHL + Sbjct: 811 WVLHQACNFAVKLERQGRANNIAINLSARQFKDASLLPTLKKIIASTQVSAKSLHLELTE 870 Query: 984 EAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGN 1039 ++ + E+ + +L+ G I + G + LK D L +D ++ + Sbjct: 871 SMLMGNVEAAIAQLHELKGLGVSISIDDFGTGYSSLSYLKRFPVDILKIDRSFIKDIPDD 930 Query: 1040 LMDEMLITIIQGHAQRLGMKTIAGPV 1065 D + I AQ+L + +A V Sbjct: 931 NNDMAITAAIIAMAQKLKLDVVAEGV 956 >UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V1H2_9PROT Length = 1134 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 209/850 (24%), Positives = 362/850 (42%), Gaps = 64/850 (7%) Query: 277 LLPANIMTMVMYAFR--AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQF 334 L P N + V+ F ERK + E + A +Y+ + V + + N+A Sbjct: 304 LNPNNEVEQVVCTFVDITERKKMEERLELTQFASDYAPDCILWVNEQARICYANEAALHC 363 Query: 335 LGYSQEELRGLTFQQLT--WPEDLN----KDLQQVEKLISGEINTYSMEKRYYNRNGDVV 388 G+S+EEL +T L +P D+ +LQ G I ++E R+ R+G + Sbjct: 364 HGFSKEELLSMTIHDLDPDFPPDVWLAHWHELQH-----KGGI---TIETRHRRRDGSIF 415 Query: 389 WALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELK 448 ++ + V+ D Y IA DI E K++E + +R+ +EA G +WE ++ Sbjct: 416 PIEVSANFVKFGDKE--YNIAYHRDITERKKSEAALRYSEQRLRDVSEASGEYLWEIDIN 473 Query: 449 PNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFR-I 507 R E+ P + E + PED A +++ ++ PFKL+ R I Sbjct: 474 LGYTYVSNRSIEVKGYTPE-QLLGHAPAEFMPPEDIDMAARIVNLAISKNQPFKLQHRDI 532 Query: 508 TVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEA 567 T I + G + L G ++T K L +E+ R+ EA Sbjct: 533 TPSGAILWEEVSGVPFYDDAGHLLGLRGTGRNITGRK-----LKEEQLRVAAAAFETHEA 587 Query: 568 VVCIDMAMKITFMNPVAEKMSGWTQEEALGV-PLLTVLHITFGDNGPLMENIYSAD---- 622 ++ D I +N ++++G++QEE LG P + ++ G N ++ YSA Sbjct: 588 IMITDAHGTIIKVNQAFQRITGYSQEEVLGENPRI----LSAGRN---EKSFYSAMWQQL 640 Query: 623 TSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSA 682 T+ ++ +SG Y +IT + +G V + D+T+ + ++ A Sbjct: 641 TTLGRWRGEIWDKRKSGQIYPKWMTITAVRDENGKTTEYVAIFSDITQRKLAEEEIRNLA 700 Query: 683 SHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRE 742 +DALT L NR +L L + + A++F+D+DRFK +ND+ GH GD LL E Sbjct: 701 FYDALTRLPNRRLLLDRLHAALSVSARSRRFGAVLFLDMDRFKTLNDTMGHDYGDLLLIE 760 Query: 743 LASLMLSMLRSSDVLARLGGDEFGLLLPDCNV---ESARFIAT---RIISAVNDYHFIWE 796 +A + +R D +ARLGGDEF +L+ + + E+++ IA +I SA++ + + E Sbjct: 761 VAERIKLCVREIDTVARLGGDEFVILVEEIDTRAEETSKHIAAIAEKIRSALSVPYRLKE 820 Query: 797 GRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEP--QQAAAHSER 854 + H S G+ L +++ AD+A Y +K+ GR V ++P QQA Sbjct: 821 -KHHHSSPSIGVCLYRGIEESTDDLLKHADMAMYQAKDSGRNAVRFFDPLMQQAV----E 875 Query: 855 AAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW--SCEGEIIDEQTFRRS 912 A ++L+ R N + L + + + R + +L W G ++ F Sbjct: 876 ARVTLENDLRHALPNDQLQLYYQIQVDN--DRRAIGAEALVRWIHPIRG-MVSPAHFIPI 932 Query: 913 FSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPL----SVAGLSSATLVNDLLEQLE 968 + +L + V Q A A + ++ +L L SV V + E + Sbjct: 933 AEETSLILEVGAWVLKTACLQLA-VWADRPMTCNLILAVNVSVQQFKQVGFVEHIAELIR 991 Query: 969 NSPLPPRLLHLIIPAEAIL-DHAESVQK---LRLAGCRIVLSQVGRDLQIFNSLKANMAD 1024 + P+ L L + +L D ++ VQK L+ G R+ + G + LK D Sbjct: 992 AYCIVPQRLKLELTESVVLNDVSDIVQKMCALKSLGVRLSMDDFGTGYSSLSYLKNLPLD 1051 Query: 1025 YLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYG 1084 L +D N+ + D +++ I AQ + IA V + L G G Sbjct: 1052 QLKIDQSFVRNIATDENDAVMVKTIIAMAQNFRLNVIAEGVETEAQLAFLKQNGCMCYQG 1111 Query: 1085 EVIADAQPLD 1094 P++ Sbjct: 1112 YYFGKPAPIE 1121 >UniRef50_Q2SF23 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF23_HAHCH Length = 637 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 145/542 (26%), Positives = 256/542 (47%), Gaps = 34/542 (6%) Query: 542 EVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLL 601 +VK L+E F+ K +L + + G +++ D +I F+N ++G+ QEEA G L Sbjct: 68 KVKALHERDFKLK-KLSSAVTNSGCSIIITDRLGRIEFVNNKFVNVTGYGQEEARG-RFL 125 Query: 602 TVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGS 661 +L+ D E I+ +D E +V+ R G YD +++T + D N + Sbjct: 126 DILNPKDMDAEKPQEQIWESDILYDGWEGEVLSRRRDG--YDFWWAVTVSTVCDSDNTVT 183 Query: 662 VLVIQ--DVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFI 719 VI DV+E ++ R++ A +D+LT LANR F +L ++ + ++ AL+F+ Sbjct: 184 NYVISGVDVSELKEANRKMQQMALYDSLTGLANRRLFVDRLEQAVKAASRDRKQIALLFL 243 Query: 720 DLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD-CNVESAR 778 DLD+FK +ND+ GH AGD+LL+ +A + + +R+ D +ARLGGDEF +LL D + S Sbjct: 244 DLDQFKRINDTLGHDAGDSLLQTVAQRLKNCVRAKDTVARLGGDEFTVLLTDIVDTFSVT 303 Query: 779 FIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRG 838 +AT+I+ A+ + + + V V S G+TL + A +M AD+A Y +K GR Sbjct: 304 PVATQILKALKEPIKLKKHEVI-VSTSIGVTLAPTDGANADVLMKNADLALYRAKEHGRD 362 Query: 839 RVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWS 898 R Y ++ AH+ + + ++++ R + + L P++ L + K+ S Sbjct: 363 RYHFY-TEELNAHALKQLL-MEQELRHALQFEEFTLGF---QPQVN------LTTGKIVS 411 Query: 899 CEGEI---------IDEQTFRRSFSDPALSHALDRRVFHEFFQQAA--KAVASKGISISL 947 E I + +F + L + + R V Q + + I I++ Sbjct: 412 VEALIRWHHPSKGLVMPDSFISVAEETGLINPIGRWVLKNACMQMKMLQDLTGSAIKIAV 471 Query: 948 PLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESV----QKLRLAGCRI 1003 LS L + E L + L P L L + ++ ++V ++LR G + Sbjct: 472 NLSARQFDDPKLEQSIEEALNETGLEPEWLELEVTESMLMGDIQAVTNKLKRLRQTGVSL 531 Query: 1004 VLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAG 1063 + G + LK + L +D E ++ + D + + I A +L +K +A Sbjct: 532 AIDDFGSGYSSLSYLKKLPVNALKVDREFVRDIPEDSNDMEITSAIIAVAHKLQLKVVAE 591 Query: 1064 PV 1065 V Sbjct: 592 GV 593 >UniRef50_Q67RI1 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67RI1_SYMTH Length = 1016 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 148/557 (26%), Positives = 246/557 (44%), Gaps = 19/557 (3%) Query: 547 NEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHI 606 + L + +ER + V +D+ I NP M G+ + + GVPL + H Sbjct: 461 RDELLESEERFRTAFEYAPIGVALVDLDFVIMRANPALHDMLGYRRGDLTGVPLRQITHR 520 Query: 607 T-FGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVI 665 + L+ + + A+E+ + H G + V S+ + G+ V + Sbjct: 521 DDLEEQESLLNAVRAGQAGSCAMEKRYLRH--DGRAVWVAVSVALVRDAHGTPRYFVAQV 578 Query: 666 QDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFK 725 DVT+ R+ QL A D LT L NR F+++L L + R AL F+D D FK Sbjct: 579 MDVTDRRQAEEQLRRLAHFDPLTDLGNRRYFQRKLEAALD--DPATPRGALFFLDFDDFK 636 Query: 726 AVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRII 785 VND+ GH AGD LL+ LA +M L +ARLGGDEFG+L+P + A +A ++ Sbjct: 637 FVNDTLGHLAGDDLLKNLARVMTETLGGRGFMARLGGDEFGILVPGVDASGAEALAQDLL 696 Query: 786 SAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVY-- 843 +AV V S GI L D+ H A +M AD+A Y +K+ G R +Y Sbjct: 697 AAVRSQIAANPACPTYVTISVGIALYPDHGHTAETLMLHADLAMYQAKHSGGDRYCMYVA 756 Query: 844 -EPQQAAAHSERAAMSLDEQWR-MIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEG 901 EP + + A + + + R + E++ ++ + ++ E + L++ +G Sbjct: 757 FEP----LNGDEAGSAWEIRLRAALAEDRFTLVFQPILDLQLGEVTQYEAL-LRMVEPDG 811 Query: 902 EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVA-SKGISISLPLSVAGLSSATLV 960 I F + + L +DR V + A+ A + +++S+ LS L+ +LV Sbjct: 812 RQIPPGEFLPAAASCGLMPEIDRWVVRRAVETIAREQARGRRLTLSVNLSGQALNDPSLV 871 Query: 961 NDLLEQLENSPLPPRLLHLIIPAEAI---LDHAES-VQKLRLAGCRIVLSQVGRDLQIFN 1016 + + ++ +PP L + A LD A + ++ L GC L G Sbjct: 872 PLVRDLIDRHQIPPGSLRFEVTESAAVTDLDQAAACIEALTDLGCEFALDDFGVGFSSLR 931 Query: 1017 SLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSG 1076 LK L +DG + + +D+ L+ + A+ LG++T+A V ++ L Sbjct: 932 YLKRLPVRTLKIDGGFIERLPDDPVDQSLVRSMVTMARGLGVRTVAEYVTSDRALEMLRR 991 Query: 1077 IGVDLIYGEVIADAQPL 1093 GVD G + PL Sbjct: 992 CGVDAAQGYYVGPPGPL 1008 Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 52/147 (35%), Positives = 86/147 (58%) Query: 281 NIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQE 340 I+ A A+R + ESE FR A EY+ IG+ALV + ++ N AL LGY + Sbjct: 448 RILVEQAMALSAQRDELLESEERFRTAFEYAPIGVALVDLDFVIMRANPALHDMLGYRRG 507 Query: 341 ELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHT 400 +L G+ +Q+T +DL + + + +G+ + +MEKRY +G VW ++V+LVR Sbjct: 508 DLTGVPLRQITHRDDLEEQESLLNAVRAGQAGSCAMEKRYLRHDGRAVWVAVSVALVRDA 567 Query: 401 DGTPLYFIAQIEDINELKRTEQVNQQL 427 GTP YF+AQ+ D+ + ++ E+ ++L Sbjct: 568 HGTPRYFVAQVMDVTDRRQAEEQLRRL 594 >UniRef50_Q47K14 Diguanylate cyclase/phosphodiesterase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47K14_DECAR Length = 783 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 144/564 (25%), Positives = 257/564 (45%), Gaps = 33/564 (5%) Query: 539 DMTEVKQLNEALFQ----EKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEE 594 D+ E + AL + E+ RL L ++ +V +D +I ++NP + + + Sbjct: 222 DLQEAEARQRALLETVDAERSRLDALLSAMRLGLVFVDQDERICYLNPAFASLWSVSLDG 281 Query: 595 ALG-VPLLTV---LHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITP 650 L +PL + L + G ++ D + ++ LH G I Sbjct: 282 HLANLPLADLRRWLDAVLTNGG--QSQLFRGDGT----SVELALH---EGRVITQQGIA- 331 Query: 651 LSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQL-RILLQTVNS 709 +++ GS +G + + +DVT R++ L + A D LT LANRA F +L R++ + Sbjct: 332 VTSASGSELGRLWIFEDVTNERQLAEHLLFMAERDPLTGLANRARFAAELDRLVSRFQRD 391 Query: 710 THQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLL 769 Q A+++ D+D FK +ND+ GH GD +L A ++ ++R+ ++LARLGGDEF ++ Sbjct: 392 ATQSGAVLYFDIDEFKTINDTFGHRVGDNVLVRTADVVSKLVRTGELLARLGGDEFAIVA 451 Query: 770 PDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIAC 829 P +++ + +A R++ A+ F ++G+ + S GI L+ ++ A E+++ AD A Sbjct: 452 PGADLDGVQAMAERVVKALTGLSFEFDGKRFGLTISLGIALLPEHAASAEELVAHADAAM 511 Query: 830 YASKNGGRGRVTVYEPQ-QAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARN 888 Y +K G+ +Y P ++H D+ + EN+L++ GV + R Sbjct: 512 YQAKRSGKNCWRIYRPDLDESSHMLSQLGWNDKIQAALNENRLVLHFQGV---HVTATRA 568 Query: 889 L----WLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGIS 944 + L+ + E++ +F + +DR V + A + ++ Sbjct: 569 ISHYEALVRMIDPDNPDELLQPGSFIPAAERTGRIVDIDRWVIGTAIHKLAGMPSLPALA 628 Query: 945 ISLPL-SVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEA---ILDHAESVQKLRLAG 1000 I++ S + A ++DLL + + P RL+ + A I D + LR G Sbjct: 629 INVSARSFDDPTLARTISDLLTEFHVN--PQRLIIELTETAALANIRDSERFIDDLRRLG 686 Query: 1001 CRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKT 1060 C + L G F LK AD L +DG N+ N D++ + I A+ LG KT Sbjct: 687 CTVCLDDFGVGFSSFAYLKHLSADVLKIDGMFIRNLVSNREDQVFVRAIVEVARGLGKKT 746 Query: 1061 IAGPVVLPLVMDTLSGIGVDLIYG 1084 +A V + L +GVD G Sbjct: 747 VAEFVGDAPTLALLGELGVDYAQG 770 >UniRef50_B2UHK4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Ralstonia RepID=B2UHK4_RALPJ Length = 1183 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 166/739 (22%), Positives = 305/739 (41%), Gaps = 34/739 (4%) Query: 343 RGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDG 402 R LTFQQ P+D++ ++ +++ + +++ R + N + SL R DG Sbjct: 420 RTLTFQQFVHPDDVDAFAHELRTVLNSDRDSWQHVCRVIDANRATRTVEIRASLYRDQDG 479 Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELY 462 + + + DI++ EQ + + +A + +G W W++ + +W M+ L Sbjct: 480 RAVRMVGGVTDISQRSAIEQELRSSEANLRVAEQIALLGSWRWDVLRDSTTWSSGMYVLT 539 Query: 463 EIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGI-RHIRALAN 521 +PP P + + + + ++ + LE + +DG R + + N Sbjct: 540 GMPPGAPPAFAQQAQFFTADSYNRLREAASRAVTEGEAYSLELEMIRRDGEHRWVLSRGN 599 Query: 522 RVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMA---MKIT 578 N EV L G D+T+ ++ +E L L ++S+ + D I Sbjct: 600 IERNDRDEVVALFGTMQDITDRRESDEQL----RLLRRVVESVPSGITVADAQQPDFPIV 655 Query: 579 FMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRS 638 ++NP E+M+G+ EE LG LH + P + + +A S I + + Sbjct: 656 YVNPGFERMTGYRAEEILGRNA-RFLH-SSEPGQPALNEVRTALRDESEIRVLLRNFRKD 713 Query: 639 GGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEK 698 G ++ ++ ++P+ G+ V + DVTE +L+ A+ D+LT L NR Sbjct: 714 GHAFLNNFLLSPVRDAKGAVTHYVGIQDDVTEQEMTRTRLAQHATIDSLTGLPNRTLLAD 773 Query: 699 QLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLA 758 +++ ++ R + +++DRFK VNDS GH GD +LR +A + + D +A Sbjct: 774 RVQQSVEMAARQRSRFYVALVNIDRFKVVNDSLGHLLGDEVLRRVAERLRDAADTVDTVA 833 Query: 759 RLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQA 818 R GGD F L++ F V EG V AS G+ + A Sbjct: 834 RFGGDVFALVISHAGSRGVDFGFDLFAEPVR-----VEGHEVFVTASIGVAEYPAHGADA 888 Query: 819 AEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWR-MIKENQLMMLAHG 877 ++ A++A Y +K GR R+ + P+ S R ++L+ Q R +++ Q +L Sbjct: 889 DSLIRHAEMAMYYAKQNGRNRLEFFAPEMDIGVSYR--LNLEHQIRATLEQGQFRLLYQ- 945 Query: 878 VASPRI--PEARNLWLISLKLW--SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQ 933 P+I R L +L W G ++ F + L + V E +Q Sbjct: 946 ---PQIDTKTGRVCGLEALIRWIHPTRG-LLPPAAFIPVAEESGLIVEIGNWVLTEAARQ 1001 Query: 934 AA---KAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA 990 A K + +++++ +S T++ LL+ L L L + +++ Sbjct: 1002 RAEWHKRGLADDLTLAVNVSPLQFKRGTVLPTLLKLQRQYGLGSGFLELEVTESMLMEGT 1061 Query: 991 ----ESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLI 1046 E + +R G RI + G LK D + +D ++ + D + Sbjct: 1062 ERTIEDLTAIRQLGVRIAIDDFGTGYSSLAYLKRLPIDLIKIDRAFVKDIDRDSNDAAIC 1121 Query: 1047 TIIQGHAQRLGMKTIAGPV 1065 T + A LG+K A V Sbjct: 1122 TTVVVLAHNLGVKVCAEGV 1140 >UniRef50_Q7NT05 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NT05_CHRVO Length = 825 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 172/666 (25%), Positives = 284/666 (42%), Gaps = 54/666 (8%) Query: 430 RITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP---HIKPNWQVWY--ECVLPEDR 484 R+ A +A + +WEW ++ + +MF L P + N + + E V D Sbjct: 135 RMGKAMQAAELDVWEWRVETDQM----QMFSLTGSEPLASGLAGNESIRHFIEQVDARDA 190 Query: 485 QHAEKVIRDSLQSRSPFKLEFR--ITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTE 542 I + ++FR + R +RA A R + R++G+ D+T Sbjct: 191 AAVSDAISLARDHGQALDIQFRARTGAEQDERWLRARA-RCFDDGEPGRRIVGVLQDITG 249 Query: 543 VKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLT 602 ++ E L Q DS E + +D K+ +NP + +G++ EEA+ P + Sbjct: 250 QRRTEERLRQAA----TVFDSTAEGIAILDARRKVVSVNPAFTQQTGYSPEEAMAWPDID 305 Query: 603 VLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSV 662 L+ T N + + ++ R + +V ++G ++ SI+ + DG V Sbjct: 306 PLYQT--PNNFIQPSSPASPEERKLWQGNVNYLHKNGKVLNIWESISIVPGPDGGVANYV 363 Query: 663 LVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLD 722 LV D++ QL Y A HD LT+L NR + ++ L + A++ IDLD Sbjct: 364 LVFSDISSVLAAQEQLDYLAKHDPLTNLCNRRMLQDRMEYELAQAMRRQKMMAVLLIDLD 423 Query: 723 RFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVES------ 776 FK +NDS GH GD LL +A+ + +R+SD +ARLGGDEF ++L D +ES Sbjct: 424 HFKTINDSLGHGHGDQLLATIATRLQGSVRASDTVARLGGDEFCIVLGD--IESPGDVDL 481 Query: 777 -ARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNG 835 + + R+ V E V V S GI++ + E++ AD A Y +K+ Sbjct: 482 MGQKLLQRLAEPVR-----LEQMVCYVTGSIGISMAPTDGMGVDELLRNADQAMYGAKHA 536 Query: 836 GRGRVTVYEPQQAAAHSERAAMSLD-----EQWRMIKENQLMMLAHGVASPRIPEARNLW 890 GR R + P A R +S EQ + E Q ++ ++ RI +A L Sbjct: 537 GRNRYCFFAPAMQKAAEVRLQISSGLHLALEQGQFRLEFQPIV---DLSCGRIRKAEAL- 592 Query: 891 LISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEF--FQQAAKAVASKGISISLP 948 L+ + +I+ F + L + V+ + F +A + + + I+ Sbjct: 593 ---LRWHHPQHGVINPAVFIPIAEECGLIAKICEWVYDQALDFIRAWRDMLRDDLRIA-- 647 Query: 949 LSVAGLSSATLVNDL--LEQLENSPLPPRLLHLIIPAEAILDHAESVQK----LRLAGCR 1002 ++V+ L L N + L++L + +P L L I +LD VQ+ R AG + Sbjct: 648 INVSALHFRDLRNPVRWLDKLTRAGVPGEALMLEITESLLLDADHKVQEALDLYRAAGIQ 707 Query: 1003 IVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIA 1062 I L G + LK DYL +D + D L I A +LG+ IA Sbjct: 708 IALDDFGTGYSALSYLKRYRLDYLKIDQAFVGQIAEEPRDHALCEAIVVMAHKLGLNVIA 767 Query: 1063 GPVVLP 1068 V P Sbjct: 768 EGVETP 773 >UniRef50_Q0C2A3 Putative sensory box-containing diguanylate cyclase n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C2A3_HYPNA Length = 792 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 139/530 (26%), Positives = 246/530 (46%), Gaps = 50/530 (9%) Query: 590 WTQEEAL--GVPLLTVLHITFGDNGPLMENIYSADTSRSAIE-----QDVVLHCRSGGSY 642 W+ E L G PL ++ H + D ++A+E +D V+ + G Sbjct: 263 WSANEVLRRGAPLTSIFHPG-----------EARDALQAALEGQVPFRDQVVPIKDGNGE 311 Query: 643 DVHYSITPLSTLD-GSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLR 701 +S+T ++ G G V DVT+S+K+ ++++ A +D LT L NR + +++L Sbjct: 312 MHWWSVTGKPVIERGQFFGFRGVASDVTQSKKIEDRIAHMAHYDGLTGLPNRITMQERLE 371 Query: 702 ILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLG 761 LL+ AL+ +DLD FK VND+ GH AGD LLR++A+ + ++ D +ARLG Sbjct: 372 SLLRRQPPPPACRALLMMDLDSFKWVNDTLGHPAGDELLRQVAARIRALSEPGDFVARLG 431 Query: 762 GDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEV 821 GDEF +++ NV + S +++ + +W G AS G+ L D H + + Sbjct: 432 GDEFAMVVERRNVHDLHGFLDQFASEMSELYDVW-GSTANSSASIGVRLFDPAIHDSRTM 490 Query: 822 MSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLD---EQWRMIKENQLMMLAHGV 878 QAD+A Y +K+ G+ + +++ + +RA LD E R I N+L + + Sbjct: 491 FRQADLALYQAKHLGKAKWCMFDDEL----EQRAQARLDIQEELQRAIDRNELRIHFQPI 546 Query: 879 ASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPA--LSHALDRRV---FHEFFQQ 933 + K +CE ++ Q R P + HA + + E+ + Sbjct: 547 VDA----------TTHKTVACE-TLLRWQHPERGLVYPGEFIEHAEENGLITRMGEWVIR 595 Query: 934 AAKAVASK---GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA 990 AA A A++ + I + +S + SA+L + ++ + S + P L L I A++ + Sbjct: 596 AALAEATRLPEHVRICVNISPLQVHSASLASTIVNAIAASNMDPSRLELEITETALMSNT 655 Query: 991 E----SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLI 1046 E + +LR G RI L G N L++ D + +D ++++ + + Sbjct: 656 EFTLRRLHQLRSLGVRIALDDFGTGFSSLNHLRSFPFDRIKIDRTFVSDIETRADSQAIT 715 Query: 1047 TIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 + A+ LGM+ A V L + LS +G + + G + A PL+ L Sbjct: 716 KSMVSLARSLGMQCTAEGVETSLQAEYLSKLGCEELQGYFFSHAHPLEQL 765 >UniRef50_B4VWW1 Sensor protein n=3 Tax=Oscillatoriales RepID=B4VWW1_9CYAN Length = 1405 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 137/465 (29%), Positives = 223/465 (47%), Gaps = 64/465 (13%) Query: 257 LATPRTYLMSHMPWLPFLLILLPANIMTM----VMYAFR--AERKHIS----ESETHFRN 306 +AT +T + + WL + A+I + V++ R ++RK + ESE FR Sbjct: 420 IATQQTLTLDYCLWLQGREVWFSASISPIAKHSVVWVARDISDRKRMEAELRESEDCFRK 479 Query: 307 AMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKL 366 A Y+A GMALV +G +L+ N+ LC+ LGYS+ EL T ++T P DL + +L Sbjct: 480 AFNYAASGMALVALDGYFLKVNRYLCEILGYSEAELLAKTCPEITHPSDLEAERDYTRQL 539 Query: 367 ISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTE---QV 423 ++GEI Y +EKRY ++ G +W LL+VSLVR + G PLY +AQ++DI E K+ E Q Sbjct: 540 LNGEIRYYHLEKRYIHKQGHSIWILLSVSLVRDSRGNPLYSLAQMQDITERKQIEEALQG 599 Query: 424 NQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPH--IKPNWQVWYECVLP 481 NQ+L+ IT AN + + I++ + I +++++ L P I+ + + P Sbjct: 600 NQRLLRAITQANPS-ILYIYD-RINKQILYFNRKIQNLLGYTPEDVIQMEDDLLATLMHP 657 Query: 482 EDR-------QHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANR----VLNKEGEV 530 +D QH E + Q+ F LE+RI K+G R L++R N+EG+ Sbjct: 658 DDLPGILHHFQHLE-----TAQTDQVFDLEYRIKHKNG--EWRWLSSRETVFTWNQEGKP 710 Query: 531 ERLLGINMDMTEVKQLNEALFQEKERLHITLD-----------SIGEAVVCIDMAMKITF 579 E++LG D+++ KQ AL + +ER + L + GEA++ + + Sbjct: 711 EQILGTATDISDHKQAEAALRESEERWQLALQGNQDGIWDWNITTGEALISDRYCEILEY 770 Query: 580 MNPVAE-KMSGWTQEEALGVPLLTVLHITFGDNGPL---MENIYSADTSRSAIEQDVVLH 635 N + GW H+ D G + +++ + AIE L Sbjct: 771 DNDQFKLDFQGWQN------------HLHPDDIGLVNQSLQDYLAQKIPHYAIE--YRLR 816 Query: 636 CRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSY 680 C+ G +H L G + V +D+TE ++ QL Y Sbjct: 817 CQDGTYKWLHSRAQALWDDAGHPVRMVGSTRDITERKQAEDQLRY 861 Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 93/382 (24%), Positives = 173/382 (45%), Gaps = 26/382 (6%) Query: 323 QWLQTNKALCQFLGYSQEELRGLT---FQQLTWPEDLNKDLQQVEKLISGEIN-TYSMEK 378 Q L N+ + LGY+ E++ + L P+DL L + L + + + + +E Sbjct: 624 QILYFNRKIQNLLGYTPEDVIQMEDDLLATLMHPDDLPGILHHFQHLETAQTDQVFDLEY 683 Query: 379 RYYNRNGDVVW-ALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEA 437 R ++NG+ W + + +G P + DI++ K+ E ++ ER LA + Sbjct: 684 RIKHKNGEWRWLSSRETVFTWNQEGKPEQILGTATDISDHKQAEAALRESEERWQLALQG 743 Query: 438 GGIGIWEWELKPNIFSWDKRMFELYEIP-PHIKPNWQVWYECVLPEDRQHAEKVIRDSLQ 496 GIW+W + R E+ E K ++Q W + P+D + ++D L Sbjct: 744 NQDGIWDWNITTGEALISDRYCEILEYDNDQFKLDFQGWQNHLHPDDIGLVNQSLQDYLA 803 Query: 497 SRSP-FKLEFRITVKDGI-RHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEK 554 + P + +E+R+ +DG + + + A + + G R++G D+TE KQ + L +K Sbjct: 804 QKIPHYAIEYRLRCQDGTYKWLHSRAQALWDDAGHPVRMVGSTRDITERKQAEDQLRYQK 863 Query: 555 ERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPL 614 E L D I + D I +N E++ GW + E + LLT + D + Sbjct: 864 ELLQTIFDHIPVMICFYDATGHIRLVNREVERVLGWDKGELDTIDLLTECYPNPTDRQKV 923 Query: 615 MENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRK- 673 ++ ++ A S QD L ++ + ++ LS DG++IG + QD+T+ ++ Sbjct: 924 LDFMFDA----SGKWQDFSLQTKNSQILETSWANIRLS--DGTSIG---IGQDITDRKRA 974 Query: 674 --MLR------QLSYSASHDAL 687 LR QL+ S ++D + Sbjct: 975 EIKLRKSEERWQLALSGNNDGI 996 Score = 42.7 bits (99), Expect = 0.081, Method: Compositional matrix adjust. Identities = 60/261 (22%), Positives = 108/261 (41%), Gaps = 26/261 (9%) Query: 328 NKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLI---SGEINTYSMEKRYYNRN 384 N+ + + LG+ + EL + +P D Q+V + SG+ +S++ +N Sbjct: 890 NREVERVLGWDKGELDTIDLLTECYPNP--TDRQKVLDFMFDASGKWQDFSLQ----TKN 943 Query: 385 GDVV---WALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIG 441 ++ WA +R +DGT I +DI + KR E ++ ER LA G Sbjct: 944 SQILETSWAN-----IRLSDGTS---IGIGQDITDRKRAEIKLRKSEERWQLALSGNNDG 995 Query: 442 IWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSP- 500 IW+ L N R E+ + W + P+ + + + +P Sbjct: 996 IWDNNLITNEHFLSPRCLEILGYDYETINTFDKWMSYIHPDHVSLVQDTFQRHINRETPD 1055 Query: 501 FKLEFRITVKDGIRH---IRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERL 557 + LE+++ +DG +R A+ ++ G R +G D+TE KQ E Q+ L Sbjct: 1056 YSLEYQMRCQDGSYKWVLVRGQAH--WDELGNPVRAVGSITDITERKQAEERERQKTREL 1113 Query: 558 HITLDSIGEAVVCIDMAMKIT 578 TL+ + + A K++ Sbjct: 1114 EFTLNQLKRTQTQLIQAEKMS 1134 >UniRef50_Q30SV7 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30SV7_SULDN Length = 659 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 112/433 (25%), Positives = 214/433 (49%), Gaps = 27/433 (6%) Query: 419 RTEQV---NQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP-HIKPNWQV 474 RTEQ+ N+ L E A E IG W+++L+ W +F ++E+ P ++ Sbjct: 240 RTEQLSKTNRLLKE----AQELTRIGSWDYDLEDGSILWSDELFNIFEVDSDEFTPTYET 295 Query: 475 WYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRV-LNKEGEVERL 533 + PEDRQ +++ +++++ + + L +R+ + + I I RV + G V+R+ Sbjct: 296 IMNFIHPEDRQSFQEMFQNAIKQKCDYSLSYRVVLGNNIEKIIYQKGRVEYDMLGNVKRI 355 Query: 534 LGINMDMTE-VKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQ 592 G D+T+ K E FQ K L+S+ E++ D+ ++N + G+T+ Sbjct: 356 TGTAQDITQRYKTSKELEFQSK-----LLNSVTESIFVHDLDGNFIYLNEASYITRGYTK 410 Query: 593 EEALGVPLLTVLHITFGDNGPLME-NIYSADTSRSAIEQ---DVVLHCRSGGSYDVHYSI 648 E LG+ + + + ++ + E N+ + S E+ +V + G + + Sbjct: 411 SEMLGMKVQELDYSDEKNSAEIYEENLANLQEQLSKKEKAVLEVSHRTKDGKILPIEITC 470 Query: 649 TPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVN 708 + D S I S+ +D++E + M + L A+ D LT + NR FE+ ++I ++ Sbjct: 471 KLIKEKDKSYIISIA--RDISELKAMNKTLEKMANTDNLTGIYNRRKFEEIIKIEMERSA 528 Query: 709 STHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLL 768 + +L+ ID+D FK +ND+ GH GD ++R+ ++ +R DV R GG+EF +L Sbjct: 529 RYNSNLSLIMIDIDHFKRINDTYGHDEGDNVIRKTVEIVSKNIRHLDVFVRWGGEEFIVL 588 Query: 769 LPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGIT-LIDDNNHQAAEVMSQADI 827 P ++A +A ++ A+ ++ G ++ S G+T I D + + + + D Sbjct: 589 CPQTESKNASILAEKLRVAIESVNYETLG---KITCSFGVTSYIKDEDKSS--FIKRLDT 643 Query: 828 ACYASKNGGRGRV 840 A Y++K+ GR RV Sbjct: 644 ALYSAKDEGRNRV 656 >UniRef50_B8GS54 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GS54_THISH Length = 528 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 13/311 (4%) Query: 540 MTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVP 599 + ++ + +L +EKE TL++I + V+ D I MN A M+G E ALG Sbjct: 221 LVRLRSIENSLNEEKELAIGTLNNIADGVIVTDSQGFILSMNRAAGHMTGLAPERALGES 280 Query: 600 LLTVLHITFGDNGPLM-----ENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTL 654 + V ++ P M + S +R+ Q L R G + V +++P+ Sbjct: 281 IDEVYRLSRPSGDPCMPPGVFATLLSGVATRAHRYQ--TLEDRQGVLHYVEETVSPIFDE 338 Query: 655 DGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRH 714 + + + +DV+ + Q+++ A HD LT NR +FE +L+ + T Q Sbjct: 339 NDQRVRVSFIFRDVSADLAHMEQMTWDAQHDHLTGALNRRAFEVELQ---RACLDTRQGR 395 Query: 715 A--LVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC 772 A L+++DLD FK +ND+ GH AGDA L L M S +R D LARLGGDEF +LL DC Sbjct: 396 ACTLIYLDLDDFKHLNDTHGHHAGDAFLVALVRTMSSCIRRHDSLARLGGDEFAILLNDC 455 Query: 773 NVESARFIATRIISAVNDYHFIWEGRVHR-VGASAGITLIDDNNHQAAEVMSQADIACYA 831 ++ +A+ I + ++++ F +EGR + GAS G+ I + VM + D ACY Sbjct: 456 DLNNAQQIVDNLARSISELTFTFEGRALKGAGASIGVHAITSRDTDPETVMRRVDEACYV 515 Query: 832 SKNGGRGRVTV 842 +K G+ +V + Sbjct: 516 AKRRGKNQVCI 526 >UniRef50_C7RN47 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RN47_9PROT Length = 1542 Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 144/581 (24%), Positives = 259/581 (44%), Gaps = 27/581 (4%) Query: 493 DSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQ 552 ++++ R + E + + G RH + + + +G + L D+T K+ E L Sbjct: 926 EAIRLRKGIEREESLPLAAGERHFLVVRFPLFDDDGAITGLCFQATDITARKRAEEQL-- 983 Query: 553 EKERLH-ITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDN 611 RL + D E V+ D +I +N ++G+T++E +G + D Sbjct: 984 ---RLAALVFDRASEGVMVTDTEQRILTINDSFSTLTGYTRQEVVG----KTPRLLRSDR 1036 Query: 612 GPLMENIYSA---DTSRSAIEQDVVLHCRSGGSYDVHY-SITPLSTLDGSNIGSVLVIQD 667 P Y+ +R + Q + + R G + + SI + +G + V + D Sbjct: 1037 MP--REFYAEMWDKVTRLGVWQGEIWNRRKNGEPYLEWLSINTVKDKNGKVVNYVGMFSD 1094 Query: 668 VTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAV 727 +T+ R+ +++ Y A+HD LT L NRA F +L + L + + +VFIDLD FK V Sbjct: 1095 ITKVRESQQRIEYLATHDELTGLPNRALFNDRLNLALAHAERSRESVGVVFIDLDNFKVV 1154 Query: 728 NDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISA 787 ND+ GH GD LL++ A +L +R+ D +ARLGGDEF +LL + + + A A R+++ Sbjct: 1155 NDTLGHETGDKLLKQAAMRLLECVRAEDTVARLGGDEFVVLLVNADRQQATLTAERLLTG 1214 Query: 788 VNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQ 847 ++ + E + AS G+++ ++ A +M AD A Y +K+ G+ + Sbjct: 1215 LSTSYHFGEHECF-ISASIGLSMFPEDASDANSLMRNADSAMYRAKDHGKNGFRFFSADL 1273 Query: 848 AAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQ 907 A+ S+R ++L+ R EN + + H R+ + +L W GE+ID Sbjct: 1274 ASQASKR--LALETGLRRAIENGELFV-HYQPQVRLECDTVVGAEALVRWRYNGEVIDPV 1330 Query: 908 TFRRSFSDPALSHALDRRVFHEFFQQAAK--AVASKGISISLPLSVAGLSSATLVNDLLE 965 F L A+D V E +Q + + IS+ +S + DL++ Sbjct: 1331 VFIPIAEQSHLIFAIDDWVLGEACRQIIEWDRAGLPPLRISVNISARHFRKDGMAADLMD 1390 Query: 966 QLENSPLPPRLLHLIIPAEAILDHAESVQK----LRLAGCRIVLSQVGRDLQIFNSLKAN 1021 + + P+ L + I E +L + Q+ L +G RI + G + LK Sbjct: 1391 IVSAHGVSPQRLCIEI-TEGVLMDVDRAQRMLAELVESGLRISIDDFGTGFSSLSYLKRF 1449 Query: 1022 MADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIA 1062 L + + + D + ++I A++LGM + Sbjct: 1450 PIHELKIARSFVDGISTDADDRAIASVIISLARQLGMSVVG 1490 >UniRef50_A4Y0Z3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=13 Tax=Pseudomonas RepID=A4Y0Z3_PSEMY Length = 960 Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 173/685 (25%), Positives = 306/685 (44%), Gaps = 51/685 (7%) Query: 430 RITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP-HIKPNWQVWYECVLPEDRQHAE 488 R+ LA EA +G+W+W+L+ + + EL+ + P ++ + + P+D Sbjct: 280 RLALALEASELGLWDWDLESDQVH-HSHLRELFGLEPEQVQVMLRDLTPRLHPDDLPRLR 338 Query: 489 KVIRDSLQSRSP-FKLEFRITVKDGIRHIRALANRVLNKE--GEVERLLGINMDMTEVKQ 545 + + + ++ RS +++E+R+ DG R + ++ G V R+LG D++ +Q Sbjct: 339 RALVEHMKGRSEDYQIEYRVRHVDGHWVWVEDRGRAVERDAAGRVRRMLGTRRDVSARRQ 398 Query: 546 LNEALFQEKE-RLHITL-DSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTV 603 QE+E RL T+ ++ E + +D ++ +N ++G+++EE +G TV Sbjct: 399 ------QEQEQRLAATVFEAASEGIFILDPDYRVLAVNRAFSAVTGYSREEVVG---RTV 449 Query: 604 LHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGS-YDVHYSITPLSTLDGSNIGSV 662 + + + S Q ++ R G Y + + G V Sbjct: 450 TSLIGSREMRRQYQMIRQELDGSGSWQGELIETRKSGELYPQWLQLNLVRDASGRPSHIV 509 Query: 663 LVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLD 722 D+T R+ +L Y + +D LT LANR+ F+++L Q + + ALV IDLD Sbjct: 510 GFFADLTARREAEERLRYLSHYDELTGLANRSLFKERLHEASQRARQSGRSIALVHIDLD 569 Query: 723 RFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD-CNVESARFIA 781 RFK +NDS GH D LLR+++ + + +D +ARL GDEF +LL ++ S +A Sbjct: 570 RFKLLNDSLGHEVADQLLRQMSRRLTQAVPEADCIARLSGDEFAILLDAYGSLSSLARVA 629 Query: 782 TRIISA------VNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNG 835 +R+++ V + + V AS GI+L+ D + ++SQA++A +K+ Sbjct: 630 SRLLAKLRLPMDVGGHELV-------VSASLGISLLPDYAREIGALISQANMAVQHAKHL 682 Query: 836 GRGRVTVYEPQQAAAHSERAAMSLDEQWRM-IKENQLMMLAH---GVASPRIPEARNL-- 889 G + A ER + L+ Q R I+E QL + +A ++ A L Sbjct: 683 GGNTFQFFTDNLQACTLER--LQLENQLRKAIEEGQLEVFYQPKLNLADDQLNAAEALVR 740 Query: 890 WLISLKLWSCEGEIID--EQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISL 947 W + GE I E+T P L R+ + Q + +A I +S+ Sbjct: 741 WRHPQQGLVAPGEFIGLAEET---GLIAPIGEFVL-RQACRQARQWQQQGLAE--IRVSV 794 Query: 948 PLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESV----QKLRLAGCRI 1003 +SV L L + + + LE + L P+ L L + +LD+ +SV ++LR G ++ Sbjct: 795 NISVYQLRQGNLTSLVRQVLEETGLAPQYLELELTESQLLDNVDSVVVTFRQLRELGVKL 854 Query: 1004 VLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAG 1063 + G + LK Y+ +D ++ D + I A L +K +A Sbjct: 855 AIDDFGTGYSSLSYLKRFPVHYVKIDQTFIRDLSPGGEDAAITRAIIAMAHSLELKVVAE 914 Query: 1064 PVVLPLVMDTLSGIGVDLIYGEVIA 1088 V MD L D I G +I+ Sbjct: 915 GVETQAQMDFLKSQNCDEIQGYLIS 939 >UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax=cellular organisms RepID=Q607T2_METCA Length = 1346 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 123/488 (25%), Positives = 224/488 (45%), Gaps = 33/488 (6%) Query: 367 ISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQ 426 + G IN Y+ E+ +++ + V +A+ + + + + E +R+E ++ Sbjct: 609 VVGAINLYAGERGFFSEDIVAVLDTMAMDVS--------FALDILARDAERERSEMRLRE 660 Query: 427 LMERITLANEAGGIGIWEWELKPNI-------FSWDKRMFELYEIPPHIKPNWQVWYECV 479 ER LA + + IW + ++ R E YE+ W E + Sbjct: 661 SEERFRLAANSAPVLIWMGDTARGCTFFNDMWLNFTGRSLE-YELG-------DGWLEGM 712 Query: 480 LPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLNKEGEVERLLGINM 538 PEDR + +R PF++E+R+ +DG R I A + GE +G + Sbjct: 713 HPEDRSRWICAYSAAFDARKPFEIEYRLRRRDGEYRTILGKATPRFDAGGEFIGYIGSCI 772 Query: 539 DMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGV 598 D+++ K+ +E+L + +++ E+++ D I +NP M+G++ EEA+G Sbjct: 773 DISDRKKGDESLLLAGK----VFEAVRESIIVTDANRVIVAVNPAFSDMTGYSPEEAVG- 827 Query: 599 PLLTVLHITFGDNGP-LMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGS 657 T + G +G ++ A + + + ++G + V +I + G+ Sbjct: 828 --RTPAFLQSGRHGKEYYAAMWRAVDQEGSWQGEFWNRRKNGELFAVLETIVTVRDETGA 885 Query: 658 NIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALV 717 + + V D++ ++ + + A +D L+ L NR ++ L + A+V Sbjct: 886 MVNYIGVAADISSLKEAEEHIHHLAYYDPLSALPNRRYLMERAEYALALAERRKEELAVV 945 Query: 718 FIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESA 777 F+D+D FK VNDS GH GD LL +A+ + R +D +ARLGGDEF LLLPD ++ Sbjct: 946 FLDVDHFKDVNDSLGHQVGDELLVRVATQIKEFTRETDTVARLGGDEFALLLPDLGRDAV 1005 Query: 778 RFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGR 837 +A +I++A+ F G+ V S GI+L + ++ AD A Y +K GR Sbjct: 1006 SQVADKILAALRK-PFEHSGQTFAVTGSIGISLYPHDGTDFETLLRNADTAMYHAKQQGR 1064 Query: 838 GRVTVYEP 845 + Y+P Sbjct: 1065 NQFRFYDP 1072 >UniRef50_C6MET2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MET2_9PROT Length = 753 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 145/561 (25%), Positives = 246/561 (43%), Gaps = 24/561 (4%) Query: 542 EVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLL 601 E +++NE L+ + ++ EA++ D I N ++G+T EE +G P Sbjct: 192 EQQKINEQLYLSSK----VFENSTEAIMIADANKIIISTNKALHIITGFTAEEVIGKPTS 247 Query: 602 TVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGS 661 V I + + I+ + + +V + G Y +I+ + + GS Sbjct: 248 IVTSIRH--STKFFQKIWLSVKQSGHWQGEVWNRHKYGREYPAWLNISSVLSKKGSICYY 305 Query: 662 VLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDL 721 ++ ++T+ +K + A++D+LT L NR F +L ++ T A++FIDL Sbjct: 306 LINFSNITDKKKSDEIIWRQANYDSLTGLPNRNMFYDRLSHDIKNAARTGMLLAVLFIDL 365 Query: 722 DRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE--SARF 779 DRFK VNDS GH+ GDALL E A + +R +D +ARLGGDEF ++L N + + R Sbjct: 366 DRFKEVNDSFGHSVGDALLVEAAKRLNGCVRETDTVARLGGDEFTIILNGINDQHCAERI 425 Query: 780 IATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGR 839 I ++ +H ++ V AS G+T + A +M AD A YA+KN GR Sbjct: 426 IQMILLELTKPFHL--NAKLAYVTASIGVTFFPADAGSAEILMKNADQAMYAAKNNGRNC 483 Query: 840 VTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGV---ASPRIPEARNLWLISLKL 896 + + A R+ ++ E ++E QL ++ + A+ I +A L ++ Sbjct: 484 CSYFTSNMRKATETRSRIAY-ELRHALREQQLFLMYQPIVKLATGSIHKAEAL----VRW 538 Query: 897 WSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAGLSS 956 E + F + L + VF + Q A A+ + + ++ + Sbjct: 539 QHPERGTVSPVEFISIAEESNLISEIGDWVFKQAVNQVAAWQANYNTNFQISINKSPKQF 598 Query: 957 ATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQK----LRLAGCRIVLSQVGRDL 1012 + ++D + L L + + I +LD E V K R AG ++ + G Sbjct: 599 ISKMSDWVNHLHEQKLDGHSIIVEITENLLLDVHELVVKQLLNFRDAGVQVAIDDFGTGY 658 Query: 1013 QIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMD 1072 + LK DYL +D +N+ D +L + A RLGMK IA V Sbjct: 659 SSLSYLKKFDIDYLKIDQSFISNLDSRSNDRILCEAVITMAHRLGMKVIAEGVETDSQKQ 718 Query: 1073 TLSGIGVDLIYGEVIADAQPL 1093 L +G D YG+ ++PL Sbjct: 719 LLIAMGCD--YGQGYFFSKPL 737 >UniRef50_C4ZM29 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thauera sp. MZ1T RepID=C4ZM29_THASP Length = 843 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 163/585 (27%), Positives = 248/585 (42%), Gaps = 46/585 (7%) Query: 293 ERKHISESETHFRNAMEYSAIGMALVGTE-GQW---LQTNKAL-----CQFLGYSQEELR 343 ER ++ R A E + L GT G W +QT A+ + LGY +EL Sbjct: 272 ERSRHELADNSARLADERQRLESILAGTRAGTWEWNVQTGAAIFNARWAEMLGYRLDELE 331 Query: 344 GL---TFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHT 400 L T+++ P+DL V + + GE Y E R +R G + L HT Sbjct: 332 PLSIDTWRRFAHPDDLADSDAAVRRHLRGETPYYEHETRMRHRAGHWIHVQDRGVLRTHT 391 Query: 401 -DGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPN---IFSWDK 456 DG P + DI + R EQ ++R+ +E+ ++E ++ + F + Sbjct: 392 ADGAPEWMFGTHIDITDRYRAEQERAGALKRLRQLSESVPGVLFECRVEDDGKVSFPYVG 451 Query: 457 RMFE--LYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVK-DGI 513 R E + + + +Y + P+D IR + + FR+ G Sbjct: 452 RQIEALIGCRAEEAEHDAAAFYARLHPDDGARVRDEIRHARHGMHDWNASFRVVHPLYGE 511 Query: 514 RHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHI---TLDSIGEAVVC 570 R IR A R + V G D T +++ERL + D+ E ++ Sbjct: 512 RRIRGEA-RCQPRTDGVGEWFGYLQDET-------GTHRDQERLRLGARVFDASQEGILV 563 Query: 571 IDMAMKITFMNPVAEKMSGWTQEEALGV---PLLTVLHITFGDNGPLMENIYSADTSRSA 627 D A++I MNP E +SG + LG L + H + +Y++ Sbjct: 564 TDAAVRIVDMNPAMEALSGHAKASLLGRNPRELGSGRH-----DAAFFAEMYASLARDGR 618 Query: 628 IEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDAL 687 + ++ SG Y V S++ + G V V D++ S A+ DAL Sbjct: 619 WQGEIWNRHASGEIYVVKASMSTVLDESGRIEHYVGVFTDISALTAQRDHFSSLANFDAL 678 Query: 688 THLANRASFEKQLRILLQTVNSTHQRHALV--FIDLDRFKAVNDSAGHAAGDALLRELAS 745 T L NR + +L+ Q V + + LV +DLD FK VNDS GHA GD LL ELA Sbjct: 679 TGLPNRRLLDDRLQ---QAVGNARRGKPLVVCMLDLDGFKPVNDSVGHAEGDRLLVELAQ 735 Query: 746 LMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGAS 805 M +LR+ + LARLGGDEF LLL D + A R++ + GR RV AS Sbjct: 736 RMQHILRAGETLARLGGDEFVLLLVDGDFRPA---LERVLEVTRAPVALSGGRFARVTAS 792 Query: 806 AGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAA 850 G + A+++ +AD A Y +K GR R ++ P+ AA Sbjct: 793 IGASAYRHGVEDGAQLLREADQALYRAKRAGRNRWVMFAPEAAAG 837 >UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHI4_CELJU Length = 595 Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 128/427 (29%), Positives = 191/427 (44%), Gaps = 18/427 (4%) Query: 650 PLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNS 709 P+ G IG V + +D+TE ++ Q+ Y A+HD+LT L NR F K L + +++ Sbjct: 122 PVFNDTGKTIGLVGIGRDITERKQSEEQIQYLATHDSLTALPNRFMFSKLLAVAIESARR 181 Query: 710 THQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLL 769 ++ A++FIDLDRFK +ND+ GH AGD LL +A+ + LR+SD++ RLGGDEF +LL Sbjct: 182 HQRQLAVLFIDLDRFKNINDTLGHDAGDQLLITMANRFRTCLRTSDIVGRLGGDEFVILL 241 Query: 770 PDCNV-ESARFIATRIISAVN---DYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQA 825 P+ + A +A +I+SA D H G+ RV AS GI L ++ +M A Sbjct: 242 PELESHDQAARVAQKILSAAIQPLDVH----GQECRVTASIGICLYPEDAEDEQALMKNA 297 Query: 826 DIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPE 885 DIA Y +K G+ Y P ER + L+ R E L H A + Sbjct: 298 DIAMYRAKEEGKNNYQFYSPDLKVRSLER--LMLENNLRKALERHEFFL-HYQAKRNLKT 354 Query: 886 ARNLWLISLKLWS-CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAA--KAVASKG 942 + + +L W E I F + L L R V Q + Sbjct: 355 GKIAGVEALVRWQHPELGTISPAHFIPLAEETGLIVHLGRWVLRAACTQGVIWQQQGLPP 414 Query: 943 ISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQK----LRL 998 I I++ LS L+ND+ L S L P LL + I I+ AE + ++ Sbjct: 415 ICIAVNLSARQFFDDNLINDIANALRESGLAPELLEMEITEGMIMQDAERAIRILTGIKA 474 Query: 999 AGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGM 1058 G R+ + G +K D L +D ++ N D + I + L + Sbjct: 475 LGVRLAIDDFGVGYSSLAHIKRFPIDTLKVDSSFIRDIPANREDRAITEAIIAMGKTLSL 534 Query: 1059 KTIAGPV 1065 IA V Sbjct: 535 TVIAEGV 541 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P38097 Uncharacterized protein yegE n=72 Tax=Proteobact... 1297 0.0 UniRef50_A6V917 Membrane protein, putative n=6 Tax=Pseudomonas a... 1026 0.0 UniRef50_A1JKY3 Putative inner membrane protein n=11 Tax=Enterob... 981 0.0 UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 955 0.0 UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 935 0.0 UniRef50_Q0KDS7 Predicted signal transduction protein containing... 932 0.0 UniRef50_A8FYM5 Signal transduction protein containing a membran... 857 0.0 UniRef50_B4X4M1 PAS fold family n=2 Tax=Alcanivorax RepID=B4X4M1... 829 0.0 UniRef50_B2VFQ9 Putative sensor-type protein YegE n=1 Tax=Erwini... 823 0.0 UniRef50_A1SU67 Diguanylate cyclase/phosphodiesterase with PAS/P... 821 0.0 UniRef50_Q12L20 Diguanylate cyclase/phosphodiesterase with PAS/P... 805 0.0 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 796 0.0 UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/P... 794 0.0 UniRef50_A8H6Y6 Diguanylate cyclase/phosphodiesterase with PAS/P... 786 0.0 UniRef50_Q3A4W5 Response regulator receiver modulated diguanylat... 782 0.0 UniRef50_C6XCZ6 Diguanylate cyclase/phosphodiesterase with PAS/P... 779 0.0 UniRef50_Q2BQI6 Putative uncharacterized protein n=1 Tax=Neptuni... 767 0.0 UniRef50_C6XBJ6 Diguanylate cyclase/phosphodiesterase with PAS/P... 761 0.0 UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/P... 761 0.0 UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/P... 761 0.0 UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/P... 759 0.0 UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 758 0.0 UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 749 0.0 UniRef50_Q2BB47 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 749 0.0 UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4... 747 0.0 UniRef50_C9PLR8 Diguanylate cyclase/phosphodiesterase with PAS/P... 747 0.0 UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 746 0.0 UniRef50_B8GTY7 Diguanylate cyclase/phosphodiesterase with PAS/P... 746 0.0 UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/P... 745 0.0 UniRef50_Q2SFI2 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC ... 744 0.0 UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/P... 742 0.0 UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/P... 740 0.0 UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsul... 735 0.0 UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 733 0.0 UniRef50_D0IUW1 Diguanylate cyclase/phosphodiesterase with n=3 T... 733 0.0 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 733 0.0 UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/P... 731 0.0 UniRef50_B8GT56 Diguanylate cyclase/phosphodiesterase with PAS/P... 731 0.0 UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncult... 731 0.0 UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/P... 730 0.0 UniRef50_Q087W4 Diguanylate cyclase/phosphodiesterase with PAS/P... 729 0.0 UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/P... 726 0.0 UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 725 0.0 UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/P... 725 0.0 UniRef50_Q7NTV0 Putative uncharacterized protein n=1 Tax=Chromob... 721 0.0 UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magneto... 721 0.0 UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/P... 718 0.0 UniRef50_Q2YC85 Diguanylate cyclase/phosphodiesterase with PAS/P... 714 0.0 UniRef50_B2J5P2 Diguanylate cyclase/phosphodiesterase with PAS/P... 713 0.0 UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax... 713 0.0 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 713 0.0 UniRef50_B9YZ47 Diguanylate cyclase/phosphodiesterase with PAS/P... 712 0.0 UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/P... 712 0.0 UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 711 0.0 UniRef50_A4Y0E0 Diguanylate cyclase/phosphodiesterase with PAS/P... 711 0.0 UniRef50_B6BGA2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 711 0.0 UniRef50_A0LA87 Diguanylate cyclase/phosphodiesterase with PAS/P... 708 0.0 UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 707 0.0 UniRef50_Q47ED8 Response regulator receiver modulated diguanylat... 707 0.0 UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/P... 700 0.0 UniRef50_D2M1V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 700 0.0 UniRef50_B0C6M6 PAS sensor diguanylate cyclase/phophodiesterase,... 698 0.0 UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/P... 698 0.0 UniRef50_Q31NI4 Response regulator receiver modulated diguanylat... 698 0.0 UniRef50_Q30T73 Diguanylate cyclase/phosphodiesterase with PAS/P... 697 0.0 UniRef50_A6UJR0 Diguanylate cyclase/phosphodiesterase with PAS/P... 697 0.0 UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/P... 695 0.0 UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/P... 694 0.0 UniRef50_B1Y6A9 Diguanylate cyclase/phosphodiesterase with PAS/P... 693 0.0 UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxaloba... 693 0.0 UniRef50_Q5P8Z7 Sensory box/GGDEF family protein n=3 Tax=cellula... 692 0.0 UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 689 0.0 UniRef50_Q8DIH6 Tlr1612 protein n=1 Tax=Thermosynechococcus elon... 688 0.0 UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacter... 688 0.0 UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/P... 688 0.0 UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromob... 688 0.0 UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultu... 687 0.0 UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/P... 687 0.0 UniRef50_C7LQR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 686 0.0 UniRef50_C6BWZ0 Diguanylate cyclase/phosphodiesterase with PAS/P... 686 0.0 UniRef50_Q88QU8 Sensory box protein n=22 Tax=Gammaproteobacteria... 684 0.0 UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 683 0.0 UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/P... 683 0.0 UniRef50_B2UHK4 Diguanylate cyclase/phosphodiesterase with PAS/P... 683 0.0 UniRef50_B0C150 Signal transduction protein containing an EAL do... 683 0.0 UniRef50_C5SCB7 Diguanylate cyclase/phosphodiesterase with PAS/P... 683 0.0 UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n... 680 0.0 UniRef50_B7JWK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 680 0.0 UniRef50_Q47HF3 Response regulator receiver modulated diguanylat... 680 0.0 UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/P... 680 0.0 UniRef50_A3JAM8 Response regulator receiver modulated diguanylat... 680 0.0 UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/P... 679 0.0 UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 678 0.0 UniRef50_B8KF61 Ggef/eal/pas/pac-domain containing protein n=1 T... 678 0.0 UniRef50_C7RN47 Diguanylate cyclase/phosphodiesterase with PAS/P... 677 0.0 UniRef50_A0LD38 Diguanylate cyclase/phosphodiesterase with PAS/P... 676 0.0 UniRef50_B9ZNS8 Diguanylate cyclase/phosphodiesterase with PAS/P... 676 0.0 UniRef50_Q4C8S6 PAS:GGDEF n=1 Tax=Crocosphaera watsonii WH 8501 ... 675 0.0 UniRef50_B9ZMB9 Diguanylate cyclase/phosphodiesterase with PAS/P... 674 0.0 UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/P... 673 0.0 UniRef50_A3ISZ5 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 673 0.0 UniRef50_Q47Z22 Sensory box/GGDEF/GAF/EAL domain protein n=5 Tax... 673 0.0 UniRef50_C7LTY3 Diguanylate cyclase/phosphodiesterase with PAS/P... 672 0.0 UniRef50_Q3A017 Diguanylate cyclase/phosphodiesterase with PAS/P... 671 0.0 UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/P... 665 0.0 UniRef50_Q1ASD1 Diguanylate cyclase/phosphodiesterase with PAS/P... 665 0.0 UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candida... 665 0.0 UniRef50_A6CIZ8 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 665 0.0 UniRef50_C6P6X8 Diguanylate cyclase/phosphodiesterase with PAS/P... 663 0.0 UniRef50_B8GQW3 Signal transduction protein containing a membran... 663 0.0 UniRef50_C4ZM30 Diguanylate cyclase/phosphodiesterase with PAS/P... 662 0.0 UniRef50_Q47X88 Sensory box sensor/GGDEF/EAL domain protein n=2 ... 662 0.0 UniRef50_A4Y0Z3 Diguanylate cyclase/phosphodiesterase with PAS/P... 662 0.0 UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromob... 662 0.0 UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus... 660 0.0 UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/P... 660 0.0 UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 658 0.0 UniRef50_A6WTB4 Diguanylate cyclase/phosphodiesterase with PAS/P... 658 0.0 UniRef50_Q3J1Y6 Diguanylate cyclase/phosphodiesterase with PAS/P... 658 0.0 UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/P... 658 0.0 UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/P... 658 0.0 UniRef50_B6BNY2 Ggdef domain protein n=2 Tax=Campylobacterales b... 658 0.0 UniRef50_A4U4T7 Two-component sensory box protein n=3 Tax=Magnet... 658 0.0 UniRef50_A6QA23 Putative uncharacterized protein n=1 Tax=Sulfuro... 658 0.0 UniRef50_A6TT69 Diguanylate cyclase/phosphodiesterase with PAS/P... 657 0.0 UniRef50_B8GSM8 Diguanylate cyclase/phosphodiesterase with PAS/P... 657 0.0 UniRef50_A0L8P4 Response regulator receiver modulated diguanylat... 657 0.0 UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 656 0.0 UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/P... 656 0.0 UniRef50_C7RRQ6 Response regulator receiver modulated diguanylat... 655 0.0 UniRef50_Q1Q2M0 Putative uncharacterized protein n=2 Tax=Bacteri... 655 0.0 UniRef50_A6F7G4 PAS sensor diguanylate cyclase and phophodiester... 654 0.0 UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 654 0.0 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 653 0.0 UniRef50_Q2BHU8 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 652 0.0 UniRef50_Q0VL09 Sensory box protein n=2 Tax=Alcanivorax RepID=Q0... 650 0.0 UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 649 0.0 UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/P... 648 0.0 UniRef50_A0KNI0 MorA n=2 Tax=Aeromonas RepID=A0KNI0_AERHH 647 0.0 UniRef50_Q1N3N5 Sensory box protein n=1 Tax=Bermanella marisrubr... 646 0.0 UniRef50_Q1GXN7 Diguanylate cyclase/phosphodiesterase n=3 Tax=Pr... 646 0.0 UniRef50_Q2SF23 Predicted signal transduction protein containing... 646 0.0 UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplast... 645 0.0 UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 645 0.0 UniRef50_Q474K3 Diguanylate cyclase/phosphodiesterase with PAS/P... 644 0.0 UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacteriu... 643 0.0 UniRef50_Q31P31 Diguanylate cyclase/phosphodiesterase with PAS/P... 643 0.0 UniRef50_Q3J9L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 643 0.0 UniRef50_B7GKR7 Multidomain signal transduction protein (Contain... 642 0.0 UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromob... 641 0.0 UniRef50_UPI0001C3140A diguanylate cyclase/phosphodiesterase wit... 640 0.0 UniRef50_C0N6D2 Putative uncharacterized protein n=1 Tax=Methylo... 640 0.0 UniRef50_D2UCH8 Hypothetical two-component system sensor protein... 640 0.0 Sequences not found previously or not previously below threshold: UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 778 0.0 UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 T... 773 0.0 UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/P... 741 0.0 UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/P... 738 0.0 UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 722 0.0 UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 713 0.0 UniRef50_C6ME82 Response regulator receiver modulated diguanylat... 712 0.0 UniRef50_B4B330 Diguanylate cyclase/phosphodiesterase with PAS/P... 710 0.0 UniRef50_C7CCD7 Putative diguanylate cyclase (GGDEF) /phosphodie... 709 0.0 UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7... 707 0.0 UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/P... 703 0.0 UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus ... 702 0.0 UniRef50_A0LKD9 Response regulator receiver modulated diguanylat... 698 0.0 UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteob... 695 0.0 UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/P... 693 0.0 UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 688 0.0 UniRef50_C4XRM5 Putative signaling protein n=1 Tax=Desulfovibrio... 687 0.0 UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 ... 685 0.0 UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/P... 685 0.0 UniRef50_B0UG16 Diguanylate cyclase/phosphodiesterase with PAS/P... 683 0.0 UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/P... 681 0.0 UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/P... 680 0.0 UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus... 679 0.0 UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/P... 678 0.0 UniRef50_Q1N2J6 Putative uncharacterized protein n=1 Tax=Bermane... 676 0.0 UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 675 0.0 UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/P... 674 0.0 UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 673 0.0 UniRef50_Q21R50 Diguanylate cyclase/phosphodiesterase with PAS/P... 673 0.0 UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Ma... 672 0.0 UniRef50_C5V0L7 Diguanylate cyclase/phosphodiesterase with PAS/P... 671 0.0 UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/P... 671 0.0 UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS... 670 0.0 UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 669 0.0 UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/P... 668 0.0 UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/P... 668 0.0 UniRef50_C1DB08 Predicted signal transduction protein containing... 666 0.0 UniRef50_Q31EA2 Diguanylate cyclase/phosphodiesterase with PAS/P... 666 0.0 UniRef50_C7R9A3 Diguanylate cyclase/phosphodiesterase with PAS/P... 666 0.0 UniRef50_A8FY98 Signal transduction protein containing a membran... 666 0.0 UniRef50_B2JAQ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 663 0.0 UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/P... 662 0.0 UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/P... 661 0.0 UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/P... 661 0.0 UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/P... 661 0.0 UniRef50_B8DLV2 Diguanylate cyclase/phosphodiesterase with PAS/P... 661 0.0 UniRef50_Q2W4Z4 Predicted signal transduction protein containing... 661 0.0 UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 660 0.0 UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 660 0.0 UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 658 0.0 UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 658 0.0 UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/P... 655 0.0 UniRef50_C1DD31 Predicted signal transduction protein containing... 655 0.0 UniRef50_C6CKZ2 Diguanylate cyclase/phosphodiesterase with PAS/P... 655 0.0 UniRef50_Q2BL35 Sensory box/GGDEF/GAF/EAL domain protein n=1 Tax... 654 0.0 UniRef50_Q60BD0 Sensory box protein n=1 Tax=Methylococcus capsul... 654 0.0 UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/P... 654 0.0 UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/P... 653 0.0 UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthin... 653 0.0 UniRef50_C7RQ11 Response regulator receiver modulated diguanylat... 651 0.0 UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/P... 651 0.0 UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus ... 650 0.0 UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/P... 650 0.0 UniRef50_Q31MH3 Diguanylate cyclase/phosphodiesterase with PAS/P... 650 0.0 UniRef50_Q88LF0 Sensory box protein n=16 Tax=Proteobacteria RepI... 650 0.0 UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria Re... 649 0.0 UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/P... 648 0.0 UniRef50_A4ACX6 Sensory box/GGDEF/EAL family protein n=1 Tax=Con... 648 0.0 UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/P... 648 0.0 UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 647 0.0 UniRef50_A6WKV6 Diguanylate cyclase/phosphodiesterase with PAS/P... 646 0.0 UniRef50_C6CDP3 Diguanylate cyclase/phosphodiesterase with PAS/P... 646 0.0 UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/P... 645 0.0 UniRef50_C6P1Y8 Diguanylate cyclase/phosphodiesterase with PAS/P... 645 0.0 UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 645 0.0 UniRef50_Q2W5V0 Predicted signal transduction protein containing... 645 0.0 UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/P... 644 0.0 UniRef50_Q2BR92 Putative uncharacterized protein n=1 Tax=Neptuni... 644 0.0 UniRef50_A5GBG4 Response regulator receiver modulated diguanylat... 643 0.0 UniRef50_B8DSE5 Diguanylate cyclase/phosphodiesterase with PAS/P... 643 0.0 UniRef50_Q55576 Slr0359 protein n=2 Tax=Cyanobacteria RepID=Q555... 643 0.0 UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio... 643 0.0 UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/P... 642 0.0 UniRef50_C6X7I8 Response regulator receiver modulated diguanylat... 642 0.0 UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteo... 642 0.0 UniRef50_Q2BPB1 Regulatory component of sensory transduction sys... 642 0.0 UniRef50_A1RJS4 Diguanylate cyclase/phosphodiesterase with PAS/P... 642 0.0 UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 642 0.0 UniRef50_A4G3M6 Putative two-component response regulator n=1 Ta... 642 0.0 UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/P... 642 0.0 UniRef50_B1Y791 Diguanylate cyclase/phosphodiesterase with PAS/P... 641 0.0 UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 641 0.0 UniRef50_B7K7G5 Diguanylate cyclase/phosphodiesterase with PAS/P... 641 0.0 UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Hermini... 641 0.0 UniRef50_Q2BPN3 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 641 0.0 UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromato... 640 0.0 UniRef50_C6MMM5 Response regulator receiver modulated diguanylat... 640 0.0 >UniRef50_P38097 Uncharacterized protein yegE n=72 Tax=Proteobacteria RepID=YEGE_ECOLI Length = 1105 Score = 1297 bits (3358), Expect = 0.0, Method: Composition-based stats. Identities = 1105/1105 (100%), Positives = 1105/1105 (100%) Query: 1 MSKQSQHVLIALPHPLLHLVSLGLVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRH 60 MSKQSQHVLIALPHPLLHLVSLGLVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRH Sbjct: 1 MSKQSQHVLIALPHPLLHLVSLGLVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRH 60 Query: 61 AGRMWPGIALSCSLGNIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQN 120 AGRMWPGIALSCSLGNIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQN Sbjct: 61 AGRMWPGIALSCSLGNIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQN 120 Query: 121 LADWLRLALGSAIVPPLLGGVLVVLLTPGDDPLRAFLIWVLSESIGALALVPLGLLFKPH 180 LADWLRLALGSAIVPPLLGGVLVVLLTPGDDPLRAFLIWVLSESIGALALVPLGLLFKPH Sbjct: 121 LADWLRLALGSAIVPPLLGGVLVVLLTPGDDPLRAFLIWVLSESIGALALVPLGLLFKPH 180 Query: 181 YLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFL 240 YLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFL Sbjct: 181 YLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFL 240 Query: 241 TTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISES 300 TTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISES Sbjct: 241 TTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISES 300 Query: 301 ETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDL 360 ETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDL Sbjct: 301 ETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDL 360 Query: 361 QQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRT 420 QQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRT Sbjct: 361 QQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRT 420 Query: 421 EQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVL 480 EQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVL Sbjct: 421 EQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVL 480 Query: 481 PEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDM 540 PEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDM Sbjct: 481 PEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDM 540 Query: 541 TEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPL 600 TEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPL Sbjct: 541 TEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPL 600 Query: 601 LTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIG 660 LTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIG Sbjct: 601 LTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIG 660 Query: 661 SVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFID 720 SVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFID Sbjct: 661 SVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFID 720 Query: 721 LDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFI 780 LDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFI Sbjct: 721 LDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFI 780 Query: 781 ATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRV 840 ATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRV Sbjct: 781 ATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRV 840 Query: 841 TVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCE 900 TVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCE Sbjct: 841 TVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCE 900 Query: 901 GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLV 960 GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLV Sbjct: 901 GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLV 960 Query: 961 NDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQKLRLAGCRIVLSQVGRDLQIFNSLKA 1020 NDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQKLRLAGCRIVLSQVGRDLQIFNSLKA Sbjct: 961 NDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQKLRLAGCRIVLSQVGRDLQIFNSLKA 1020 Query: 1021 NMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVD 1080 NMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVD Sbjct: 1021 NMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVD 1080 Query: 1081 LIYGEVIADAQPLDLLVNSSYFAIN 1105 LIYGEVIADAQPLDLLVNSSYFAIN Sbjct: 1081 LIYGEVIADAQPLDLLVNSSYFAIN 1105 >UniRef50_A6V917 Membrane protein, putative n=6 Tax=Pseudomonas aeruginosa RepID=A6V917_PSEA7 Length = 1105 Score = 1026 bits (2653), Expect = 0.0, Method: Composition-based stats. Identities = 386/1092 (35%), Positives = 598/1092 (54%), Gaps = 15/1092 (1%) Query: 23 GLVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRHAGRMWPGIALSCSLGNIAASIL 82 G + F+ L + LS+ +A +W P +I+ A R R WP I +L N+AA+ L Sbjct: 4 GALFFLAALACIYLSRQPATIAAIWLPNAILAAALLRAPLRQWPMILFCTALANLAANRL 63 Query: 83 LFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQNLADWLRLALGSAIVPPLLGGVL 142 + ++ + N+ EA A+LLR + NL +R+ A+VPPLLG + Sbjct: 64 YGDSLWMSAAFLPANLSEATFAAMLLRMNRVREDFDFNLLSAVRVLWAGALVPPLLGASV 123 Query: 143 VVLLTPG---DDPLRAFLIWVLSESIGALALVPLGLLFKPHYLLRHRNPRLLFESLLTLA 199 L + + W + +++G LAL+PL L + R ++ + L Sbjct: 124 GAALVSLFGLGSFPQMWARWYVGDAMGMLALLPLCLASSLATWRHGLSGRAGVDNAMLLL 183 Query: 200 ITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLAT 259 TL +S++++ LP+ F ++++ L+ +A LI +++++A + Sbjct: 184 ATLFISFVALTRLPYSFIYVLLPLLVAAASTSVFGTALIGCLNTCFIAVLIAMGVFAPES 243 Query: 260 PRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVG 319 + + +LP L L+PA +++++M R E+ ++ E FR AME+SAIG ALV Sbjct: 244 SQQRFGEPLLYLPMALTLIPAFLVSVIMERSRREQHQVAIGEAQFRGAMEFSAIGTALVA 303 Query: 320 TEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKR 379 +G+ + N+ALC+ LGY E + LTFQ +T+ DL DL V L++G IN+Y MEKR Sbjct: 304 LDGRLFKVNEALCRMLGYPAERVGELTFQAITYAADLELDLDLVRDLLAGRINSYQMEKR 363 Query: 380 YYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGG 439 Y ++G+ WA ++VSLVR +G YF+ Q+EDI+ KR E ++L ER+ LA +AG Sbjct: 364 YLRQDGETFWARISVSLVRDEEGIAQYFVTQVEDIDSRKRAELERERLAERVKLATDAGQ 423 Query: 440 IGIWEWELKPNIFSWDKRMFELYEI-PPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSR 498 IGIWEW+L+ N WD RMF+LY I + + W + P+D + + +L Sbjct: 424 IGIWEWDLRHNRLHWDFRMFDLYGIRSGPGETTVEQWQAALHPDDHERVLHELDRALSGL 483 Query: 499 SPFKLEFRITVKD-GIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERL 557 F EFRI D +RH+RA+A +++ R++GIN D+TE++ L E L++EKERL Sbjct: 484 QKFDCEFRIVRPDRQVRHLRAIATLTRDEDSRPVRMIGINSDITEIRTLAETLYEEKERL 543 Query: 558 HITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMEN 617 +TL SIG+AV+ D ++TFMNPVAE M+GWT ++ALG P V ++ D G +++ Sbjct: 544 QVTLYSIGDAVLTTDAGGRVTFMNPVAEAMTGWTLQDALGAPHELVFNVLDSDTGDTLDS 603 Query: 618 IYSADTSRSAI---EQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKM 674 + + E L R G +D+ P+ T DG IG+VLV Q+VT++R M Sbjct: 604 PVRRCLQNTRVFYLEDGATLISRKGEQHDIQNCAAPVRTRDGEIIGTVLVFQNVTKARAM 663 Query: 675 LRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHA 734 R+LSY ASHDALT L NR FE++LR L +HAL FIDLDRFK VNDSAGHA Sbjct: 664 QRELSYHASHDALTGLFNRTKFEEELRRALANAQERASQHALCFIDLDRFKVVNDSAGHA 723 Query: 735 AGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFI 794 AGD LLREL+ ++ R+SD LARLGGDEFGLLL DC++ A +A+++I + F Sbjct: 724 AGDMLLRELSRILADRTRASDTLARLGGDEFGLLLFDCDLAVAEEVASKLIEQICSVRFP 783 Query: 795 WEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSER 854 WEGRV+ VGAS GIT + + +E+MSQAD+ACYA+K+ GR RV+VY+ + Sbjct: 784 WEGRVYDVGASIGITALTATSRSTSELMSQADVACYAAKHAGRNRVSVYQFGHEEVERQH 843 Query: 855 AAMSLDEQWR-MIKENQLMMLAHGVASPRI-PEARNLWLISLKLWSCEGEIIDEQTFRRS 912 + L R ++ ++ + A + + + + L+L+ +G++ F + Sbjct: 844 RDILLASGLREALENDRFQLQAQEIVPVVARRDGGRHYELLLRLYDPDGQMTPPGAFIPA 903 Query: 913 FSDPALSHALDRRVFHEFF-QQAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSP 971 L ++DR V +E + A G++I + LS L+ + LL+++E+SP Sbjct: 904 AERFNLMASIDRWVINEALINFGPRIAAIDGLTIGINLSGNSLNDPLFLPYLLDRIEHSP 963 Query: 972 LPPRLLHLIIPAEAILDH----AESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLL 1027 L P L+ + A+++ + V KLR GC++ L G L FN LK D + Sbjct: 964 LGPERLYFELTETALMNQLSVASRIVDKLRDLGCKVALDDFGSGLSSFNYLKNFAVDAIK 1023 Query: 1028 LDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVI 1087 +DG N+ + +D+ ++ I AQRLG T+A V ++D L+ +GVD G + Sbjct: 1024 IDGSFVRNLDKSPVDQAIVDSINQIAQRLGAVTVAEFVESREILDHLARLGVDYAQGYAV 1083 Query: 1088 ADAQPLDLLVNS 1099 QP ++ Sbjct: 1084 GRPQPFATVLEQ 1095 >UniRef50_A1JKY3 Putative inner membrane protein n=11 Tax=Enterobacteriaceae RepID=A1JKY3_YERE8 Length = 1134 Score = 981 bits (2536), Expect = 0.0, Method: Composition-based stats. Identities = 491/1101 (44%), Positives = 715/1101 (64%), Gaps = 11/1101 (0%) Query: 16 LLHLVSLGLVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRHAGRMWPGIALSCSLG 75 LLH+ + +V F+ LF + LS+ LAPLWFPT+++MVA + H R W L+ + Sbjct: 34 LLHITIISIVVFLLALFCIRLSEQSENLAPLWFPTAVLMVALFHHPMRYWSWQLLAAGIS 93 Query: 76 NIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQNLADWLRLALGSAIVP 135 IAA+ +L+ S + T IN+ EA GA LLRK L +PL NL WL+ ++ + I+ Sbjct: 94 IIAANFILYGISGFPLPLTLINLTEAAAGAWLLRKFLQPKDPLNNLFSWLKFSVCTVILV 153 Query: 136 PLLGGVLV-VLLTPGDDPLRAFLI-WVLSESIGALALVPLGLLFKPHYLLRHRNPRLLFE 193 PLL G+ L P + L W +SE+IG LAL P+GLL++ Y + LF+ Sbjct: 154 PLLSGLAAAWYLAPQNGSFTQVLTVWFMSEAIGMLALGPVGLLYRRGYFNITNKTKALFD 213 Query: 194 SLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAAD 253 + + ++L+ ++ ++YLP+PFTFII+ L+W+++RLPR E F I +++++M+ + Sbjct: 214 MIWMMIVSLSACYIGLMYLPFPFTFIIMALIWTSIRLPRFETFTICFLATLLIAMMINFN 273 Query: 254 PSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAI 313 L + ++P L++L+P + M MVM+AFR E++HI ESE FRNAMEYSAI Sbjct: 274 LFTLQVDTKLSVQAFSFIPLLMVLIPPHAMAMVMHAFRMEKEHIVESENRFRNAMEYSAI 333 Query: 314 GMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINT 373 GMALV EG+W+Q N+ALC+ LGY QE L LTFQQ+T PEDL+ DL+ ++ L G I + Sbjct: 334 GMALVSPEGKWMQVNQALCKLLGYRQETLLTLTFQQITHPEDLSADLKLLDDLYHGHIPS 393 Query: 374 YSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITL 433 YSMEKRY +G+VVWALL VS+VR PLY+I+Q+EDIN+LK++E VN++LMERITL Sbjct: 394 YSMEKRYIRSDGEVVWALLVVSVVRDHAQQPLYYISQVEDINDLKKSEIVNRRLMERITL 453 Query: 434 ANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRD 493 ANEAGGIGIWE +++ + SWDKRM+ELY IP + + VW + + PED ++ Sbjct: 454 ANEAGGIGIWELDIRKQLISWDKRMYELYHIPFNTPVDETVWQQYIHPEDINRVKREYSA 513 Query: 494 SLQSRSPFKLEFRITVKD-GIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQ 552 +L R P++L+FR+ + + I H+R AN + +K G + RL+G +DMTE++ L EAL + Sbjct: 514 ALTQRQPYRLDFRLLLPNGDIVHLRNQANMICDKNGNILRLIGTTLDMTEIRNLTEALHE 573 Query: 553 EKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNG 612 EKERLHITLDSIGEAVVC D MKITFMNPVAEKM+GW ALG P+ ++ +T G +G Sbjct: 574 EKERLHITLDSIGEAVVCTDQEMKITFMNPVAEKMTGWANTIALGQPIQHIIKLTNGVDG 633 Query: 613 PLMEN-IYSADTSR--SAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVT 669 P ++N I T R S++ + +VLH R G YD+ S+ PL TL+G+ +G+VLV QDV Sbjct: 634 PEIDNPIEHCLTHRPYSSLNESIVLHHRDGQYYDIQESVAPLKTLEGTVVGAVLVFQDVG 693 Query: 670 ESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVND 729 ESR M+R+LS+SASHD LT L NRA+FE +L+ +Q Q+HAL F+DLD FKAVND Sbjct: 694 ESRAMMRKLSHSASHDNLTGLPNRANFENKLKAAIQKSIDFDQQHALAFLDLDYFKAVND 753 Query: 730 SAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVN 789 +AGH AGDALL+EL+ LM LR+SD +ARLGGDEFGLL+ +C + A+ I ++S +N Sbjct: 754 TAGHPAGDALLKELSQLMRQHLRNSDCVARLGGDEFGLLMLNCTLPHAKAITQSLVSMIN 813 Query: 790 DYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQ-A 848 YHF WE +++R+GASAG+T I +N Q +E+M+QADIACY +K+ GRG+V +Y+P+Q Sbjct: 814 GYHFYWEDKLYRIGASAGVTQISSSNSQRSEIMAQADIACYTAKHSGRGQVYLYQPRQKQ 873 Query: 849 AAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQT 908 + +S +E ++ ENQL++ A P+ P + + +SL++ + ++ + Sbjct: 874 LLARQHELLSREEVESILSENQLLLQVTPTAPPKTPLSVCFYQVSLEIDRPQSPLVSQSA 933 Query: 909 FRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLE 968 F + + L +D + + A+A+ KG+++++PLS A L LL ++ Sbjct: 934 FEEAATLYNLLPKVDSWICEQLLVDHAQAIHQKGLALAIPLSEAALLKEDFRQSLLTLVQ 993 Query: 969 NSPLPPRLLHLIIPAEAILDHA----ESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMAD 1024 + LPP+ L+ +I +L + + KL+ GC++++ + G +L F L + D Sbjct: 994 QTLLPPQSLYWMIDESTLLQYPFAIGNFLAKLQQPGCKLIVKEFGHNLNDFELLAEHHID 1053 Query: 1025 YLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYG 1084 YL + EL A++ N MDE+LI+II G AQR + T+AGPV LP + L IGVDL G Sbjct: 1054 YLKFNSELIAHIHINQMDEVLISIINGTAQRANIATLAGPVELPPTLSKLIDIGVDLADG 1113 Query: 1085 EVIADAQPLDLLVNSSYFAIN 1105 +I +PL ++NSSYFAI Sbjct: 1114 TMIGRTEPLSEVLNSSYFAIK 1134 >UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6V4_METSD Length = 1126 Score = 955 bits (2468), Expect = 0.0, Method: Composition-based stats. Identities = 245/1116 (21%), Positives = 440/1116 (39%), Gaps = 62/1116 (5%) Query: 13 PHPLLHLVSLGLVSFIFTLFS---LEL---SQFGTQLAPL-WFPTSIMMVAFYRHAGRMW 65 P L ++V L ++ F++ L L + + T ++P F +I++V Y R W Sbjct: 11 PLSLRNIVKLSIIVFVYCLLGSLNLWIPIPDAWATLISPTAGFSLAILLVFGY----RAW 66 Query: 66 PGIALSCSLGNIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQNLADWL 125 P I + ++ A++ + T + +E ++ LL+++ + L L D+L Sbjct: 67 PAIFMGSLFTHLHATVYYVAA-----TMAVGDTLETLLACYLLKQVARFDPALIRLRDFL 121 Query: 126 RLALGSAIVPPLLGGVLVVLL--TPGDDPL---RAFLIWVLSESIGALALVPLGLLFKPH 180 L + + PL+ ++ VL+ G D +F L ++ L P L F + Sbjct: 122 TLVFFAVGISPLVSALINVLMLVVVGADTTALANSFTNSWLEDAFSYLLFTPAVLAFYHY 181 Query: 181 YLLRHRNPRL----------LFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRL 230 +R R+ +F LLT+ + S +S L P F + L+MW+A+R Sbjct: 182 EPIRWSWARVGEALILAGLVVFSCLLTMLGAMDKS-MSQLMQPQAF-MLFPLIMWAALRF 239 Query: 231 PRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAF 290 + A L L M A A W+ L++ ++ + Sbjct: 240 HQRGAALSVLFVAMTALWGGAHGLGTFAHDFAQSNLLDYWMYVLVLSSTGVALSGLNAGR 299 Query: 291 RAERKHISESETHFRNAMEYSAI---GMALVGTEGQWLQTNKALCQFLGYSQEEL-RGLT 346 + E + + A G+A++ G+ + N AL + GYS ++ G Sbjct: 300 IRSEARLKEQLDTYDALLHAQADVNEGVAII-HRGKIVYGNDALWRIGGYSPGDIPLGSD 358 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 F L P D + + ++ + E +NG + +A + R + Sbjct: 359 FFSLIHPSDRKRVSEIYQQRLQDMDVPTRYEALGLGKNGRAIHIEIAAAQYRDDSQRIVT 418 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIP- 465 I DI+ K+ E + + E+ +W K L P Sbjct: 419 LI---IDISSRKKAEAELVKSQQDYRELVESVQAIVWRAIPGGKFTFVSKEAEALLGYPL 475 Query: 466 PHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD-GIRHIRALANRVL 524 + W + + P+DR + R F ++R+ D + ++ + + Sbjct: 476 AQWTTDPGFWVDKIHPDDRDWVVEYCRTESLKLQSFDFDYRMIAADGRVVWMKDIVKVIP 535 Query: 525 N-KEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPV 583 N L+G+ +D+T K L D+ E +V D A ++ +N Sbjct: 536 NMSNTRPAELVGVMLDITASKAAEADL----RLARQVFDNTAEGIVITDPAFRVLEVNQA 591 Query: 584 AEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYD 643 ++++G+ +EE +G L + E I+ ++ +SG SY Sbjct: 592 YQQITGYDKEEIIGK--LPSVMQAGLHEAAYYEGIWQTLRREGQWVGEIWNRRKSGESYP 649 Query: 644 VHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRIL 703 SI+ ++ GS V V D+T+ + +L + A+HDALTHL NRA ++++ Sbjct: 650 EWLSISQVADAKGSVQNYVAVFTDITQRKLSEERLQFLANHDALTHLPNRALLQERIDQA 709 Query: 704 LQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGD 763 L A++FIDLDRFK +ND+ GH GD LL+E A + LR +D +AR GGD Sbjct: 710 LFRAQRNKTAIAVLFIDLDRFKIINDTLGHQTGDMLLQEAAKRLKECLRETDTVARQGGD 769 Query: 764 EFGLLLPDCNVESARF-IATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVM 822 EF +L+ DC IA +I++ + FI GR + AS GI++ D+ A ++ Sbjct: 770 EFVVLVEDCGDTDYLNTIARKIMATLAQ-PFILVGRELFISASIGISVYPDDGLDTASLL 828 Query: 823 SQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPR 882 AD A Y +K G+ Y + E + + R ++ N+ ++ R Sbjct: 829 KHADAAMYRAKESGKNTFRFYAAEANTNSVELLTLE-NNLRRAVERNEFVLHYQPKVDLR 887 Query: 883 IPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVA-- 939 + + ++ W E ++ F + L + + E +QA + Sbjct: 888 --SQKIIGAEAVVRWQHPELGMLSPMQFIPLAEETGLIIDIGAWIMRESCRQAVEWQQLT 945 Query: 940 SKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQK 995 + + +++ LS TL + + L S L P L L I I+ +AE +Q Sbjct: 946 GQNVRVAVNLSARQFRDETLRQTIADALTESGLTPDCLELEITESMIMHNAERAREVLQH 1005 Query: 996 LRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQR 1055 G +++ G F LK D L +D ++ ++ D + I A Sbjct: 1006 FHDLGAHVLIDDFGTGYSSFGYLKHFPIDSLKIDRSFVRDIPDDVDDMAITQAIIAMAHS 1065 Query: 1056 LGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQ 1091 L +K +A V + L G D I G + ++ Sbjct: 1066 LQIKVVAEGVETQEQLAFLKKQGCDQIQGFLFSEPL 1101 >UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H367_METFK Length = 1070 Score = 935 bits (2416), Expect = 0.0, Method: Composition-based stats. Identities = 229/1061 (21%), Positives = 428/1061 (40%), Gaps = 49/1061 (4%) Query: 64 MWPGIALSCSLGNIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQNLAD 123 M PG+ L A L+F S L N+ A +G LL++ + + + L D Sbjct: 1 MLPGLLLGAVATQYTAG-LVFPASFL---IGCGNVASAALGYYLLKRFIRFEPEMTRLRD 56 Query: 124 WLRLALGSAIVPPLLG------GVLVVLLTPGDDPLRAFLIWVLSESIGALALVPLGLLF 177 + + L A++ PLL G+ + + P D +L W + +++G + L P L Sbjct: 57 LMGMVLVGAVISPLLSATSGALGLRLFGVVPDSDLHVTWLQWWMGDALGIILLTPAILAC 116 Query: 178 KPHYLLRHRNPRLLFESLLTLAITLTLSWLSM-------LYLPWPFTFIIVLLMWSAVRL 230 + +R + L E++ ++ L L +L+ L + L++W+ + Sbjct: 117 FHYEPIRWTRAK-LLEAVSLASMLLGLCFLAFNDLLSQAGELEAKAFLVFPLVIWAVLSF 175 Query: 231 PRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAF 290 + A L VM + + W+ L+ + ++ + Sbjct: 176 HQRGAAAASLLIVMTALWGGGGYHGFFSMEISNAALFNYWMFALVTVSIGVGLSGLHVGR 235 Query: 291 RAERKHISESETHFR---NAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEEL-RGLT 346 + + + + NA + G +V +G+ + N+A+ + GY ++ G + Sbjct: 236 LQADERLRQQLGLYNALSNAQSDAGEG-VMVIEDGKIIYANEAVRKIGGYDARDISMGSS 294 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 F L P D + Q ++ I GE E ++ G + +A + R Sbjct: 295 FLSLIHPSDRERVAQHYKQRIRGEYTPSRYEALAISKLGKPIPIEVAAANYRDGSER--- 351 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIP- 465 + I DI+ K+ E+ Q E+ +W + + L P Sbjct: 352 IVVLIIDISSRKQAEEALLQSRAEYRKLVESVKAVVWRATPEAAFTFVSQEAESLLGYPV 411 Query: 466 PHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD-GIRHIRALANRVL 524 N W + + P+DR + LE+R+ D ++ + + Sbjct: 412 REWTSNTSFWVDKLHPDDRPWVVDFCARETRQLKDHVLEYRMRAADGRTVWLQDIVRVIP 471 Query: 525 NKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVA 584 ++ G+ + L G+ +D+T+ K E+L K+ D+ EA++ D I +N Sbjct: 472 DRFGKPQELFGVMLDITDRKAAEESLNLSKQ----VFDNTSEAILIADRDRNILEVNQAY 527 Query: 585 EKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDV 644 M+G+ +E+ +G L + G G L+ N+ +++ RSG Y Sbjct: 528 LDMTGYGREDCVGTYLALLDEPAGG--GQLIGNLVQ---QHGKWMGELLAQKRSGEYYPA 582 Query: 645 HYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILL 704 SI+ + GS V+V+ D+++ ++ +L + A+HD LT L NR ++++ + + Sbjct: 583 WVSISTVHDNHGSLQNYVVVLTDISQRKQAEERLQFLATHDGLTGLPNRTLLQERMELAV 642 Query: 705 QTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDE 764 Q ++FIDLDRFK +ND+ GH AGD LL+E+A + LR +D +AR GGDE Sbjct: 643 LRAQRYQQCVGVLFIDLDRFKIINDTLGHQAGDVLLQEVAGRLGECLRQTDTIARQGGDE 702 Query: 765 FGLLLPD-CNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMS 823 F +L+ D + +A +I+ A+ FI + + AS GI++ D+ + ++ Sbjct: 703 FVVLVEDFIEQQYLVNVARKIMHALAQ-PFILMQQELYISASIGISVYPDDGVDISSLLK 761 Query: 824 QADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRI 883 AD+A Y +K+ G+ Y A R + + R ++ N+ +L A + Sbjct: 762 NADMAMYRAKDDGKNTFHFYSADGNANSVSRLTLE-NSLRRALERNEFSLLYQ--AKLDL 818 Query: 884 PEARNLWLISLKLWSC-EGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV--AS 940 E + +L W E ++ Q F + + + V + + A A Sbjct: 819 AEQNIIGAEALIRWHSAELGMVSPQDFIPVAEETGMIIEIGEWVLQQACRDACHWQEVAG 878 Query: 941 KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKL 996 + I + + +S +L + LE S L P L L I I+ +AE +Q Sbjct: 879 RPIRVGVNISARQFREDSLYQAISNALEESGLTPNCLELEITESMIMQNAERASQMLQHF 938 Query: 997 RLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRL 1056 R G +++ G LK D L +D ++ + D + I A L Sbjct: 939 RNLGSYVLIDDFGTGYSSLGYLKHFPIDSLKIDRSFVRDIPQDSDDMAITQAIIAMAHSL 998 Query: 1057 GMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 + +A V ++ L G G D + G + + ++ V Sbjct: 999 KINVVAEGVETQAQLEFLRGQGCDQLQGYIFSRPLVVEDFV 1039 >UniRef50_Q0KDS7 Predicted signal transduction protein containinga membrane domain, an EAL and a GGDEF domain n=4 Tax=Cupriavidus RepID=Q0KDS7_RALEH Length = 1132 Score = 932 bits (2410), Expect = 0.0, Method: Composition-based stats. Identities = 370/1109 (33%), Positives = 562/1109 (50%), Gaps = 36/1109 (3%) Query: 16 LLHLVSLGLVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRHAGRMWPGIALSCSLG 75 L L+ G F+ +L L++ +A +W P + + P + Sbjct: 23 WLPLLLAGAGYFVLAAAALWLARLPGTVAAVWLPNAFGLGLLLHRPRAEGPWLLAGMLGA 82 Query: 76 NIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQN---LADWLRLALGSA 132 ++ A+ + + + T N+ E + L +LL + L LA + + Sbjct: 83 SVLANHAAGDSVATALMLTGANLAEMLFALGL-LRLLDRHAVLGRHGPLAAFAVMLAVGG 141 Query: 133 IVPPLLGGVLVVLLTP---GDDPLRAFLIWVLSESIGALALVPLGLLFKPHYLLRHRNPR 189 I+ P LG + G + W ++++G L+P+ L + Sbjct: 142 ILAPALGATAGAMAIAATHGTSFASVWWTWWQADALGMALLLPMMLSMTEVRVRAAVARP 201 Query: 190 LLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVR-LPRMEAFLIFLTTVMMVSL 248 +L LA+ L + + PF + + L+ A+ P A L + T+ + +L Sbjct: 202 VLAPQAGALALCLAIGAFAQWQSHDPFAAMSLPLVLVALAGNPFATALLTLVATLCLQAL 261 Query: 249 MMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAM 308 M+ A + +P ++++ P I + R R + S+ FR AM Sbjct: 262 MLLA----------HRHEAVPLSAAVIMVFPVCIAYL-TEQNRHGRASLRSSDKRFRQAM 310 Query: 309 EYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLIS 368 E+SAIGMALVG +G+ N+A+ + LGYS EL L++QQLT P+DL DL+QV+ L+S Sbjct: 311 EHSAIGMALVGMDGRCQTVNRAMTELLGYSAAELHELSYQQLTHPDDLTGDLRQVDNLLS 370 Query: 369 GEINTYSMEKRYYNRNGDVVWALLAVSLVRHTD-GTPLYFIAQIEDINELKRTEQVNQQL 427 G+I +Y +EKRY +++G W LLAVSLVR G P +FI Q+EDI+ K +Q ++L Sbjct: 371 GKIESYRLEKRYRHKDGHYRWVLLAVSLVRDEQTGEPQHFITQVEDIHARKLAQQELERL 430 Query: 428 MERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHI-KPNWQVWYECVLPEDRQH 486 RI LA EAGG+GIWEW+ +WD RM L+ P P + W + P+D Sbjct: 431 SRRIQLAAEAGGVGIWEWDFTSAGVTWDARMHALHGTDPAGGTPVVEQWIAMLHPDDVSR 490 Query: 487 AEKVIRDSLQSRSPFKLEFRITVKD-GIRHIRALANRVLNKEGEVERLLGINMDMTEVKQ 545 +R +++ +PF E+RI +RH+RA+A +G + L+G N D+TE ++ Sbjct: 491 VSGEMRQAIRGEAPFDTEYRIARPGGDVRHVRAMAMVTRTDDGTAQALVGTNWDITEQRR 550 Query: 546 LNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLH 605 L EALF+EKERLHITL SIG+AV+C D AM +TFMNP+AE+++GWT A G+PL V Sbjct: 551 LTEALFEEKERLHITLRSIGDAVICTDAAMHVTFMNPIAEQLTGWTMASATGLPLEQVFR 610 Query: 606 ITFGDNGPLMENIYSADTSR---SAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSV 662 I G + + A + ++ VL +G +DV S P+ T G +G+V Sbjct: 611 IVDEATGDPIPSPVEACLRTLAPAYLQDGAVLQSLTGERHDVQDSAAPVLTARGEVLGAV 670 Query: 663 LVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLD 722 LV QD+T +R + R+L+ SA HDALT L NR FEK+LR R AL FIDLD Sbjct: 671 LVFQDITTARALQRELARSAMHDALTGLPNRTWFEKRLREACDAARLHGHRAALCFIDLD 730 Query: 723 RFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIAT 782 RFK VND+AGH AGD LLREL ++ + +R DVLARLGGDEF LLL DC V+ A + Sbjct: 731 RFKIVNDTAGHGAGDVLLRELGYMIRNHVRPDDVLARLGGDEFALLLKDCTVDQAEQVCQ 790 Query: 783 RIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTV 842 +I A+ F WEGRV+ +GAS GI ID + +E+MS+AD+ACYA+K GR RV+V Sbjct: 791 GVIDAIRGRRFPWEGRVYDMGASIGIAAIDLDVPPVSELMSRADVACYAAKAAGRSRVSV 850 Query: 843 YEPQQAAAHSERAAMSLDEQWR-MIKENQLMMLAHGVASPRIPEARN-----LWLISLKL 896 Y ++ A + + ++ N+ + A + + + E + I +++ Sbjct: 851 YRRDESDARRHHRELEVAAGIHSALEANRFRLFAQEIRALQPEENEDGAEHCHIEILVRM 910 Query: 897 WSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS-KGISISLPLSVAGLS 955 G++I F + L +DR V + + + + G+S+S+ LS L Sbjct: 911 VDEHGDLIMPGAFIPAAERYDLMGHVDRWVIRNVLRGYGERLGAVPGLSVSINLSANSLG 970 Query: 956 SATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQKL----RLAGCRIVLSQVGRD 1011 L+ L +LE S LP + L I A++++ + +L R AGC + L G Sbjct: 971 EPFLLPFLHAELEASALPASRIRLEITETALINNMAAANRLVTEMRRAGCTVSLDDFGSG 1030 Query: 1012 LQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVM 1071 L F LK D+L +DG + N +D +++ I RLG++T+A V + Sbjct: 1031 LSSFAYLKQFPVDFLKIDGSFIRQLADNAVDREIVSSINDIGHRLGVRTVAEWVEDERTL 1090 Query: 1072 DTLSGIGVDLIYGEVIADAQPLDLLVNSS 1100 D L IGVD G VI LD+ + Sbjct: 1091 DALRAIGVDYAQGYVIGRPVALDVFLAGC 1119 >UniRef50_A8FYM5 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FYM5_SHESH Length = 1055 Score = 857 bits (2214), Expect = 0.0, Method: Composition-based stats. Identities = 232/1112 (20%), Positives = 433/1112 (38%), Gaps = 118/1112 (10%) Query: 12 LPHPLLHLVSLGLVSFIFTL-----FSLELSQFGTQLAPLWFPTSIMMVAFYRHAGRMWP 66 L H L +L +SF++ L SL Q G ++P+W PT I + A R+WP Sbjct: 6 LKHHLRYLALCATLSFVYYLSGRLGLSLAFEQAG--VSPVWPPTGIAISAVLIFGFRVWP 63 Query: 67 GIALSCSLGNIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQ-NLADWL 125 GI L L N++ + L FS + L N +EA+V LL + Y Q N W Sbjct: 64 GIMLGALLVNLSIA-LPFSAAIL---IALGNTLEAIVAGYLLIRCAERYPFTQVNHTAWF 119 Query: 126 RLALGSAIVPPLLGGVLVVLLTPGDDPLRA------FLIWVLSESIGALALVPLGLL-FK 178 + A++ P+ + ++ + + A + W L + +GAL +VPL L F+ Sbjct: 120 ---IAIAVMAPMFSATIGLVSLSMHNLIEASELGIVWSTWWLGDIVGALVIVPLLLTWFR 176 Query: 179 PHYLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPW-PFTFII----VLLMWSAVRLPRM 233 PH + P + +++ L L S + + P +I LL+W+A+R Sbjct: 177 PHESMNGGVPVMALWGTCLVSLGLALLIFSPWHTEYDPHQLLIFMMLPLLIWTALRFHHR 236 Query: 234 EAFLIF--LTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFR 291 + L+ + + + ++ P ++ + L++ + +++ + +++ A + Sbjct: 237 GSTLLVTVFSGIAISGTLVGYGPFVMESTNQSLLTLQASVGAIMVTI------LILIASQ 290 Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQT-NKALCQFLGYSQEELRGLTFQQL 350 ERK ++ + +E A VG L T NK L Q + +++ G T + L Sbjct: 291 EERKRVNRRLLQVQQDLE------AKVGQRTHELYTSNKQLAQEV--TRQHQLGETLKSL 342 Query: 351 TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQ 410 + + Q ++ + N Y G FI Sbjct: 343 LNATNFTSNDQFLQSCVKDLANAY---------------------------GAYFAFIGI 375 Query: 411 IEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKP 470 D Q ++ + +W + + FS+ L P Sbjct: 376 FSD---------KTCQSIKTL---------AVWAGDKVEDNFSY-----RLRGTPCEDAM 412 Query: 471 NWQVWY----ECVL-PEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLN 525 N V + PED + + L+ S F + I I + + ++ Sbjct: 413 NHNVELISSRAALHYPED------KLLNELEVDSYFGAPLVAPSGETIGIIAVMDKKAMD 466 Query: 526 KEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAE 585 E V+ +LG+ + ++ ++ +E E EA+V D KI +NP Sbjct: 467 IEEWVKPVLGLFANRVALELQRQSTHKEMEMAASVFKESAEAIVICDSEDKILRVNPAFY 526 Query: 586 KMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVH 645 K++G++Q E +G + + ++ N +A + +V + ++G + Sbjct: 527 KITGYSQIEVVGQSPQLLQ--SDRPIQSMLHNREAALKKNDIWQCEVSGYRKNGEHFLSW 584 Query: 646 YSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQ 705 ++ P+ +G + + D+TE + + A HD+LT L NR +F+ Q+ L+ Sbjct: 585 QTVIPVKDENGDTQQIIYIFSDITERKLFEEHIYNLAHHDSLTQLPNRVAFQLQMNTALE 644 Query: 706 TVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEF 765 + + A++FIDLD FK +ND++GH GD LL+++A LR DV++R GGDEF Sbjct: 645 RAKRSKTQMAVMFIDLDHFKMINDTSGHPVGDLLLQQVAERFKRALRKEDVISRFGGDEF 704 Query: 766 GLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQA 825 +LL + ++A + R + A F + AS GI + DN +M A Sbjct: 705 TVLLSNTRTDNATTVVARKLLACFYEPFKLPSSEVVISASIGIGVFPDNGDSVDSLMMNA 764 Query: 826 DIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPE 885 D A Y +K GR Y + ER + LD + + ++ ++ ++ P Sbjct: 765 DSAMYRAKEKGRNCFQFYTKEMNQYAQERLELELDLR-KALERDEFVLHYQPQFDPN--- 820 Query: 886 ARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV--ASKG 942 R + +L W + ++ F L + + V Q + Sbjct: 821 GRIIGCEALIRWQHPDKGLLSPGEFINMAEITGLIVPIGKWVIDTACMQHKMWLSQGYPA 880 Query: 943 ISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRL 998 ++IS+ LS L+ + + S + P L L + ++ + E ++ + Sbjct: 881 LNISVNLSGRQFLHHDLLETVKNAITTSGITPSCLELELTESIMMVNVEETIRTLNAISS 940 Query: 999 AGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGM 1058 G + + G + LK + L +D + + D ++ I A L + Sbjct: 941 LGIHMSIDDFGTGYSSMSCLKRFPVNKLKIDQSFVRGLPQDKEDVAIVKSIIVMAHALNL 1000 Query: 1059 KTIAGPVVLPLVMDTLSGIGVDLIYGEVIADA 1090 IA V ++ L + G + Sbjct: 1001 TVIAEGVETLEQLEFLKSSRCEEFQGYYFSRP 1032 >UniRef50_B4X4M1 PAS fold family n=2 Tax=Alcanivorax RepID=B4X4M1_9GAMM Length = 864 Score = 829 bits (2142), Expect = 0.0, Method: Composition-based stats. Identities = 292/847 (34%), Positives = 451/847 (53%), Gaps = 15/847 (1%) Query: 271 LPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKA 330 + ++LL A + V+ RAE + +SE FR AM++S+IGMAL+ G+W N A Sbjct: 9 VTVTVVLLAALFLRCVLRRNRAELAQVKDSEIRFRLAMKHSSIGMALLSPRGEWQAVNHA 68 Query: 331 LCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWA 390 LC GY + L +FQ ++ P+DL K + L+SG+I YS+E+R+ R GD +W Sbjct: 69 LCDLAGYDEAGLLSTSFQDISHPDDLLKSRGMLADLLSGDITGYSLEQRFITRRGDDLWV 128 Query: 391 LLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPN 450 L+VS VR G Y IAQ+E+I+ K +EQ Q+ R+ +A E GG+GIW++ + + Sbjct: 129 RLSVSAVRVE-GQVSYLIAQVENIHAAKLSEQALQESRHRLQMALEVGGVGIWQYSPQSD 187 Query: 451 IFSWDKRMFELYEIPPHIKPN--WQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFR-I 507 + WD+RM+ELY + P + Q+W + V P+D + + EFR + Sbjct: 188 VLFWDERMYELYGVQPGAPGDGTLQIWRDQVHPDDYTDINAAFQRVIAGEEDLDTEFRTL 247 Query: 508 TVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEA 567 IRHIR A V+ +G ++G N D+T K + ++L EKERL +TL SI + Sbjct: 248 RPGGEIRHIRVRAETVVRSDGAETLVVGTNWDVTAEKGMQQSLAHEKERLRVTLTSIADG 307 Query: 568 VVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSA 627 VV D ++TFMNPVAE ++GW + EA G+P+ +L ++ + + N S S Sbjct: 308 VVATDEIGRVTFMNPVAESLTGWREAEAEGLPVGDILMLSDDNATMPIPNPISVALSGGD 367 Query: 628 I---EQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASH 684 + + +L R G Y++ S PL + DG G+V+V +DVT R M ++L Y A+H Sbjct: 368 VCFLREGSMLQSRDGSRYEIQDSAAPLKSADGQVTGAVMVFRDVTSRRAMQKKLRYHATH 427 Query: 685 DALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELA 744 DALT L NR FE L+ L + H L FIDLDRFK VND+AGH AGDALLRE A Sbjct: 428 DALTGLTNRREFENTLQESLDEPGAEHSM--LCFIDLDRFKVVNDTAGHVAGDALLRECA 485 Query: 745 SLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGA 804 ++ +R DV+ARLGGDEFGLLL C + A IA R+I A+ D F W+ ++ +GA Sbjct: 486 RVIGRQVREGDVVARLGGDEFGLLLRHCPAQRAIQIAERLIGALGDIRFAWKESLYDIGA 545 Query: 805 SAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWR 864 SAG+ +D N E MS+AD+ACYA+K+ GR RV+VY P + A + + R Sbjct: 546 SAGLVQLDANVITVEEAMSRADVACYAAKHRGRNRVSVYTPDDSEASRRHLELQMAAGLR 605 Query: 865 -MIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALD 923 ++ N+ ++ A + + + + L+L G+I++ +F + + +D Sbjct: 606 ESLESNRFLLYAQEIRPIDASTEPSHYEVLLRLRDRNGDILNPGSFIPAAERYQMMPHID 665 Query: 924 RRVFHEFFQQAAKAVAS-KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIP 982 R V + + +A+ ++I++ LS L T + L L + L P L I Sbjct: 666 RWVLTQLLVSLSDELAALPQLNIAINLSATSLDDPTFMPFLESLLSKTSLSPERLTFEIT 725 Query: 983 AEAILDH----AESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQG 1038 +++ ++ + ++R GC++ L G F+ LK D++ +DG N+ Sbjct: 726 ETTVVNQLSSASDLLGRIREQGCKVALDDFGSGFSSFSYLKHFPVDFIKIDGSFVRNLLH 785 Query: 1039 NLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 + +D ++ I A RLG+KT+A V ++ L GVD + G I QPL L Sbjct: 786 SSVDRTIVESINEVAHRLGVKTVAEYVEEHALIGVLEEAGVDFVQGYAIGRPQPLSALFE 845 Query: 1099 SSYFAIN 1105 + + Sbjct: 846 QQHRGVG 852 >UniRef50_B2VFQ9 Putative sensor-type protein YegE n=1 Tax=Erwinia tasmaniensis RepID=B2VFQ9_ERWT9 Length = 877 Score = 823 bits (2127), Expect = 0.0, Method: Composition-based stats. Identities = 420/834 (50%), Positives = 593/834 (71%), Gaps = 6/834 (0%) Query: 16 LLHLVSLGLVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRHAGRMWPGIALSCSLG 75 + + L +SF+ T + LEL + Q++PLWF T++M V +R+ R P + C LG Sbjct: 44 WFNALLLACLSFVLTCYCLELIKVSGQISPLWFSTALMTVVVFRNPTRALPILLAGCILG 103 Query: 76 NIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQNLADWLRLALGSAIVP 135 A+I S ++ + IN+++A++G +LLR LL PL +L W ++ L + ++ Sbjct: 104 LTCANIFFNGLSFYSLVFPLINLLQALLGGMLLRLLLEPDAPLNSLFSWAKMVLVAGLLT 163 Query: 136 PLLGGVLV--VLLTPGDDPLRAFLIWVLSESIGALALVPLGLLFKPHYLLRHRNPRLLFE 193 L+GG++ +L G L + IW +SE IG LAL P+GLL++ Y RH +LFE Sbjct: 164 TLIGGLIACWLLQLTGHAALHFYAIWTVSEVIGMLALGPVGLLWRTDYARRHLRQSVLFE 223 Query: 194 SLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAAD 253 +LLTL TLTL W ++ Y P PFTF++V+L +SAVRLPR +AF+++L T++M+SLM+A Sbjct: 224 TLLTLMATLTLCWFTLRYAPSPFTFVVVILFYSAVRLPRFDAFVVYLATILMMSLMLAFQ 283 Query: 254 PSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAI 313 T + +PW+PFLL L+P+++MT+VM++FR ERKHISESET FR+AMEYSAI Sbjct: 284 LIAPGTSSLQQLIALPWVPFLLALIPSHMMTLVMHSFREERKHISESETRFRHAMEYSAI 343 Query: 314 GMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINT 373 GMALV T GQW++ N++L + GYS EEL LT Q+LT P+DL+ + Q L++GEI T Sbjct: 344 GMALVSTSGQWIKVNQSLAKLFGYSPEELCELTAQELTHPDDLDTGVAQARALLAGEIET 403 Query: 374 YSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITL 433 Y++EKRY+ R+G++VW LLAVSLVR ++ PLYFIAQ++DI ELK +E +N++LMERITL Sbjct: 404 YNLEKRYFRRDGEIVWTLLAVSLVRDSEEQPLYFIAQVKDITELKHSENINKRLMERITL 463 Query: 434 ANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRD 493 AN AGGIG+WEW++ I SWDKRM ++Y++P + +P +Q W + P DR+ A + Sbjct: 464 ANVAGGIGVWEWDISNGIMSWDKRMLQIYQLPMNSQPTYQDWANRLHPADRERAMGSFNN 523 Query: 494 SLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQE 553 ++++ +P +EFRI ++G+RHIR+ N + +++G+VER+LGIN D++ V+ L +AL+QE Sbjct: 524 AIKNATPVDVEFRIQTENGVRHIRSQCNTLCDEKGQVERMLGINQDISAVRLLTDALYQE 583 Query: 554 KERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGP 613 KER+HITLD+IGEAV+ D M++TFMNPVAEKMSGW Q +A G L +L IT G G Sbjct: 584 KERMHITLDAIGEAVISTDEKMRVTFMNPVAEKMSGWLQHQASGKALNEILQITHGSRGS 643 Query: 614 LMENIYSADTSR----SAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVT 669 EN+ + + ++ S ++ +VLH RSG + V+YS++PL TL G NIGSV+VIQDV+ Sbjct: 644 ATENLLNCNLTQQKKSSDLDTGLVLHNRSGNQFAVNYSLSPLKTLAGENIGSVMVIQDVS 703 Query: 670 ESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVND 729 E+R+M+R+LSYSASHD LT L NRASFE QL++L+++ Q H LVFIDLDRFKAVND Sbjct: 704 EAREMMRRLSYSASHDMLTRLPNRASFEHQLKLLIKSSVERRQHHMLVFIDLDRFKAVND 763 Query: 730 SAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVN 789 SAGHAAGD LL E++ +M MLR+ DVLARLGGDEFG+LLP C+ E A + ++ AVN Sbjct: 764 SAGHAAGDRLLCEISHIMQQMLRADDVLARLGGDEFGVLLPICSPEEACEVIGSVVDAVN 823 Query: 790 DYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVY 843 YHF W+G HR+GASAG+T I +N E+M+QAD ACY +K+ GRG++ VY Sbjct: 824 RYHFQWDGHEHRIGASAGLTHISADNADITELMAQADRACYQAKHSGRGQLCVY 877 >UniRef50_A1SU67 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Alteromonadales RepID=A1SU67_PSYIN Length = 1014 Score = 821 bits (2120), Expect = 0.0, Method: Composition-based stats. Identities = 225/1013 (22%), Positives = 415/1013 (40%), Gaps = 52/1013 (5%) Query: 104 GAVLLRKLLPWYNPLQNLADWLRLALGSAIVPPLLGGVLVVLLTPGDDP------LRAFL 157 A+LL + L ++++LTP + RA L Sbjct: 15 AALLLAMFFIYDMAAFRNRTVFGFYWAIFTGIALGLIGIIIMLTPWEYAPGIIVDSRAVL 74 Query: 158 IWVLSESIGALALVPLGLLFKPHYLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFT 217 + + G + + ++ L + ++ ++ + TL ++W Y P P Sbjct: 75 LGISGLFFGTIPTLIAMVITATLRLFQGGGAAVIGVLVIITSGTLGIAWRY--YRPHP-- 130 Query: 218 FIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLIL 277 S + + F + + VM+ + LA LP LL+ Sbjct: 131 -------LSELSFREIYLFGVIIHGVMLALTFIFPWEMTLAV------LSNISLPVLLLY 177 Query: 278 LPANIMTMVMYAFRAERKH----ISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQ 333 + +++ R R + ESE FR+ + +IG+A+ WL+ N LC+ Sbjct: 178 PLITALLGMLFVQRLRRNQSTDALKESEFLFRSQFDLGSIGIAITYPGKGWLRVNPRLCE 237 Query: 334 FLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLA 393 LGY +EEL L + +LT P+D + DL Q +++++GE + YS++KR+ ++G+ V+ + Sbjct: 238 ILGYREEELLLLNWSELTHPDDRHLDLYQYDQMLTGEEDGYSLDKRFIRKDGESVYVHMT 297 Query: 394 VSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFS 453 +S R DG + IA I D +E K E + E++ +G W+W ++ N Sbjct: 298 ISCYRV-DGAVQFVIAGILDSSERKHAEDKIRGRKEQLLSVLSGSELGFWDWNIEANTVH 356 Query: 454 WDKRMFELYEIP-PHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRS-PFKLEFRITVKD 511 + R E+ I+ + + + V P D + + D L+ R+ K+E+R+ + Sbjct: 357 RNARWAEMLGYRFEDIQNDTSINLDSVHPNDCGRVWQSVTDHLEGRTAQHKIEYRMRTRQ 416 Query: 512 GIRHIRALANRVLN--KEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVV 569 G +++N ++ + R+ G + D+T+ K E++ + + + EA+ Sbjct: 417 GEYKWILDCAKIVNYGEDQQPLRMSGTHTDITKRKLAEESM----QLASMVYQNSREAMT 472 Query: 570 CIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIE 629 D I NP +M+G++ +E G ++ + + + + + A S Sbjct: 473 VTDSNGNIITTNPAFTEMTGYSADEITGKSHTFIV--SKQQDKRVYQRMELALNSTGHWR 530 Query: 630 QDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTH 689 +V ++G +Y I + D S V D+TE +K + + A+ D LT Sbjct: 531 GEVSCRHKNGENYMALLGINSIYNEDRSVHRRVAQFSDITERKKSEKIIWKQANFDNLTG 590 Query: 690 LANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLS 749 L+NR F QL L+F+DLDRFKAVND+ GH GD LL ++A + + Sbjct: 591 LSNRQMFHDQLLHEKNKAQRRGLNVGLLFLDLDRFKAVNDTLGHNMGDQLLIDVAQRLRN 650 Query: 750 MLRSSDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGI 808 +R D+++R GGDEF +++ N +S +A +I+ + + F+ + + S GI Sbjct: 651 CVRKRDLVSRFGGDEFTVIIGGLKNTQSVERVAQKILCELAE-PFLLGEQNVYITPSIGI 709 Query: 809 TLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKE 868 T + ++ AD A Y++K GR + ++ D ++ +K+ Sbjct: 710 TFYPKDGEATEMLLKNADQAMYSAKEKGRNCYHYFTNSMQEQVERGGQLANDLRY-ALKK 768 Query: 869 NQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVF 927 NQL + + + + + +L W E ++ F + + VF Sbjct: 769 NQLELYYQPIVA--LGTGQIRKAEALIRWHHPELGMVSPAEFIPIAEETGTIVEIGDWVF 826 Query: 928 HEFFQQAAKAVAS--KGISISLPLSVAGLSSATL-VNDLLEQLENSPLPPRLLHLIIPAE 984 + Q A +S+ S + LE L LP + + + I Sbjct: 827 RQAADQVAHWRREYQNDFQVSINKSPVQFREGGSDITSWLEHLLALGLPGQAVVIEITEG 886 Query: 985 AILDHAESVQ-----KLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGN 1039 +LD + + R +G + L G + L+ D L +D N++ + Sbjct: 887 LLLDGSSRIVIDKLLAFRDSGIEVSLDDFGTGYSSMSYLRKFHIDNLKIDQSFVRNLKVD 946 Query: 1040 LMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQP 1092 D +L I A +LGM+ IA + LS G D G + A P Sbjct: 947 SDDMILCEAIIIMAHKLGMQVIAEGIENEEQRRLLSAAGCDYGQGYLFAKPLP 999 >UniRef50_Q12L20 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Shewanella RepID=Q12L20_SHEDO Length = 1047 Score = 805 bits (2079), Expect = 0.0, Method: Composition-based stats. Identities = 224/939 (23%), Positives = 415/939 (44%), Gaps = 47/939 (5%) Query: 196 LTLAITLTLSWLSMLYLPWPFTFIIVLLMWS----------------AVRLPRMEAFLIF 239 + L L LS + +P +I+ L S ++L ++ F + Sbjct: 111 VLLVAALVLSPYVIYLTDFPIISLILALGLSGVLGALFRRYTVEHLGTIKLAKLYLFGLV 170 Query: 240 LTTVMMVSLMMAADP--SLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHI 297 + V + + M+ AD ++ YL+ P L++L AN+M+ ++ R + + Sbjct: 171 VQIVFLSTSMLTADNWRHVIHLNSLYLLVFFP----LIMLAAANLMSKYIFFERNMQIRL 226 Query: 298 SESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLN 357 E + F+N + IG+A+ WL+ N +C+ L YS++EL +T+++LT PEDL Sbjct: 227 QE-DFLFKNQFDIGNIGIAITSKAKYWLKVNPCICKMLKYSEKELTRMTWKELTHPEDLE 285 Query: 358 KDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINEL 417 KDL +++ GEI+ Y ++KR+ ++G +V+ L V+ + +G+ L IA DI +L Sbjct: 286 KDLSYFNRMLKGEISEYEIDKRFIAKDGAIVYTHLTVACRFYDNGSML-VIAGFLDITKL 344 Query: 418 KRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIP-PHIKPNWQVWY 476 K+ E Q E++ L ++ +GIW+W + N + + R ++ + +W+ Sbjct: 345 KQAEAALQNSKEQLALVLDSSDLGIWDWHINTNEVASNLRSAQIIGCELALLNQKPSLWF 404 Query: 477 ECVLPEDRQHAEKVIRDSLQSRSPFK-LEFRIT-VKDGIRHIRALANRV-LNKEGEVERL 533 + ++ EDR+ K + + +S +E+RI + IR I V + G+ R+ Sbjct: 405 KAIIAEDRKRLIKSLLAIRKGQSIHHKIEYRIRSLNGDIRWILDTGKVVEVADTGQPLRM 464 Query: 534 LGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQE 593 G + D+T++K+ E+L + EA+ D KI NP +++G+ + Sbjct: 465 CGTHTDITDLKRAEESLSIAASVYR----NSSEAMCVFDYQGKIVNTNPAFSEITGFDAD 520 Query: 594 EALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLST 653 E +G L + ++ + + + ++ ++G +Y +I + Sbjct: 521 EVIGQHLAVLQKEEQAEH--FNLQLEQYLFEKRYWQGELSFQRKNGQTYTAWVTINAIGE 578 Query: 654 LDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQR 713 LD + +V++ DV+E ++ + A++D LT L NR + +++ + +Q Sbjct: 579 LDTCDTLNVMLFADVSEKKQAEELIWLQANYDTLTGLPNRRMLLEYIKLQIANCTRDNQG 638 Query: 714 HALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD-C 772 AL+F+DLD FK VNDS GH GD+LL E + + + +R +D++AR+GGDEF ++L D Sbjct: 639 FALLFLDLDFFKEVNDSLGHDMGDSLLVEASQRIKACIRDADLVARIGGDEFTIVLTDFT 698 Query: 773 NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYAS 832 + + +I+ +++ F+ + + S GITL D+ ++ AD A Y++ Sbjct: 699 GPKGVERVTNKILKQLSE-PFMLGSEMAYISGSIGITLYPDDALTIDGLLKNADQAMYSA 757 Query: 833 KNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIP-EARNLWL 891 K GR + + P+ R + D + IK + + + Sbjct: 758 KAHGRNKFNYFTPKMQETALRRMKLIQDLKT-AIKMEEFELYYQPIIDFSANASDNITKA 816 Query: 892 ISLKLWSCEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGI--SISLP 948 +L W I F D + + VF + +QAA+ + G+ IS+ Sbjct: 817 EALIRWHHPKLGFISPVDFIPIAEDTGMIVEIGNWVFRQACRQAAQWKQTYGLDIQISIN 876 Query: 949 LSVAGLSSAT-LVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRI 1003 S V + + L P + + I +L+ + R AG +I Sbjct: 877 KSPVQFRDERSSVTSWTQYMSELNLSPASICVEITEGLLLETESGVGAKLAAFRDAGMQI 936 Query: 1004 VLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAG 1063 L G + LK DYL +D +N++ N D L I + +LG+K IA Sbjct: 937 SLDDFGTGYSSLSYLKKFDIDYLKIDKSFVSNLEDNTNDLSLCEAIIVMSHKLGIKVIAE 996 Query: 1064 PVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNSSYF 1102 + L L G D G + + + S YF Sbjct: 997 GIETELQRAMLECAGCDYGQGYLFSKPVKAEDF-ESRYF 1034 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 796 bits (2057), Expect = 0.0, Method: Composition-based stats. Identities = 177/818 (21%), Positives = 330/818 (40%), Gaps = 22/818 (2%) Query: 290 FRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQ 349 + + E +E++ + ++ EG+ + N+A YS E+ G Sbjct: 394 VEKRSRELRELSALQGAILEHAGALVVVLDREGRIRRFNRACEALTQYSFSEVEGRQVWD 453 Query: 350 LTWPEDLNKDLQQVEKLI--SGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYF 407 PE+ + ++ E + ++ + R+G + S++ G + Sbjct: 454 FIPPEERRIVQDEAFAVLFNDPEQSRSTLTNHWVARDGGRRLIEWSNSVLHDAQGKVEFV 513 Query: 408 IAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPH 467 +A D+ + R E ++ R+ A +G W +L W MF ++E Sbjct: 514 VAVGNDVTDKMRAEAALKESESRLKEAQRIAQVGSWALDLVTGKLIWSDEMFRIFETDEA 573 Query: 468 -IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD-GIRHIRALANRVLN 525 +++ + + + PEDR+H K S+ + +P+ L R+ + D ++ + Sbjct: 574 AFGQSYEAFLDALHPEDREHVNKAYMHSVTNHTPYDLVHRLLLPDGRVKWLHGRGETRYG 633 Query: 526 KEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAE 585 K G+ G D+T K+ +AL + GEA++ D A I +NP Sbjct: 634 KNGDPIASCGTVQDITARKKQEDAL----RLYASIFEHSGEAILIADQARHIIAVNPAFT 689 Query: 586 KMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVH 645 ++G+ ++ G + + + +++ + +++ + G Y Sbjct: 690 NLTGYALDDIRGEEPTIL--AGGQASEESYRSTWASLEQTGYWQGEIIDRRKDGTLYPKW 747 Query: 646 YSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQ 705 +++ + DG V D+TE + Q+ + A HD LT L+NR S + QL L Sbjct: 748 MAVSVVRDADGVLTHYVASFTDITERKLAEAQIKHLAYHDPLTGLSNRFSLQTQLDQTLA 807 Query: 706 TVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEF 765 + A+VF+DLDRFK++NDS GHA GD LL E+A + +R SD++ARLGGDEF Sbjct: 808 LARREQRTLAVVFLDLDRFKSINDSLGHALGDQLLVEVARRLRDNVRDSDIVARLGGDEF 867 Query: 766 GLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQ 824 ++L + + A +A +++ A+ + G AS GI+L + A +M Sbjct: 868 VVVLTEVGDAAGAARVADKLLGALV-PRYRIGGHALHTTASIGISLYPHDGDDADALMKN 926 Query: 825 ADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIP 884 AD A Y +K+ GR V + P+ + +R D + ++ Q + + Sbjct: 927 ADTAMYHAKSQGRDNVQFFTPEMNQSVLKRLQFDHDLRV-AVEAGQFELHYQPQIN--ST 983 Query: 885 EARNLWLISLKLWSCEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQ--AAKAVASK 941 R + + +L W ++ F + L L V +E +Q + Sbjct: 984 SGRVVKVEALVRWQHPREGLVSPAEFIPIAEETGLILPLGEWVLNEACRQLRLWRDAGIT 1043 Query: 942 GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLR 997 +++++ LS L S L+ + L N L L L I + + +Q LR Sbjct: 1044 DLTVAVNLSAHQLHSPALIPMVARTLGNHGLEGADLCLEITESVAMRDTTASIAQLQALR 1103 Query: 998 LAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLG 1057 G + + G + LK D L LD ++ N D + A LG Sbjct: 1104 DLGIHLSIDDFGTGYSSLSYLKLLPIDTLKLDQSFVCEIEFNPSDVAICAATIALAHSLG 1163 Query: 1058 MKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDL 1095 ++ +A + L+ D + G + + P + Sbjct: 1164 LEVVAEGIETETQRRLLASHRCDFMQGYLFSAPLPAER 1201 >UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V1H2_9PROT Length = 1134 Score = 794 bits (2052), Expect = 0.0, Method: Composition-based stats. Identities = 185/840 (22%), Positives = 332/840 (39%), Gaps = 34/840 (4%) Query: 277 LLPANIMTMVMYAFR--AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQF 334 L P N + V+ F ERK + E + A +Y+ + V + + N+A Sbjct: 304 LNPNNEVEQVVCTFVDITERKKMEERLELTQFASDYAPDCILWVNEQARICYANEAALHC 363 Query: 335 LGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAV 394 G+S+EEL +T L + L +L ++E R+ R+G + ++ Sbjct: 364 HGFSKEELLSMTIHDLDPDFPPDVWLAHWHEL--QHKGGITIETRHRRRDGSIFPIEVSA 421 Query: 395 SLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSW 454 + V+ D Y IA DI E K++E + +R+ +EA G +WE ++ Sbjct: 422 NFVKFGDKE--YNIAYHRDITERKKSEAALRYSEQRLRDVSEASGEYLWEIDINLGYTYV 479 Query: 455 DKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFR-ITVKDGI 513 R E+ P E + PED A +++ ++ PFKL+ R IT I Sbjct: 480 SNRSIEVKGYTPEQLLG-HAPAEFMPPEDIDMAARIVNLAISKNQPFKLQHRDITPSGAI 538 Query: 514 RHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDM 573 + G + L G ++T K E L EA++ D Sbjct: 539 LWEEVSGVPFYDDAGHLLGLRGTGRNITGRKLKEEQLRVAAAAFE-----THEAIMITDA 593 Query: 574 AMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVV 633 I +N ++++G++QEE LG + + ++ T+ ++ Sbjct: 594 HGTIIKVNQAFQRITGYSQEEVLGENPRIL--SAGRNEKSFYSAMWQQLTTLGRWRGEIW 651 Query: 634 LHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANR 693 +SG Y +IT + +G V + D+T+ + ++ A +DALT L NR Sbjct: 652 DKRKSGQIYPKWMTITAVRDENGKTTEYVAIFSDITQRKLAEEEIRNLAFYDALTRLPNR 711 Query: 694 ASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRS 753 +L L + + A++F+D+DRFK +ND+ GH GD LL E+A + +R Sbjct: 712 RLLLDRLHAALSVSARSRRFGAVLFLDMDRFKTLNDTMGHDYGDLLLIEVAERIKLCVRE 771 Query: 754 SDVLARLGGDEFGLLLPDCNVES------ARFIATRIISAVNDYHFIWEGRVHRVGASAG 807 D +ARLGGDEF +L+ + + + IA +I SA++ + + + H S G Sbjct: 772 IDTVARLGGDEFVILVEEIDTRAEETSKHIAAIAEKIRSALS-VPYRLKEKHHHSSPSIG 830 Query: 808 ITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIK 867 + L +++ AD+A Y +K+ GR V ++P A R + D + + Sbjct: 831 VCLYRGIEESTDDLLKHADMAMYQAKDSGRNAVRFFDPLMQQAVEARVTLENDLR-HALP 889 Query: 868 ENQLMMLAHGVASPRIPEARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRV 926 +QL + + R + +L W ++ F + +L + V Sbjct: 890 NDQLQLYYQIQVD---NDRRAIGAEALVRWIHPIRGMVSPAHFIPIAEETSLILEVGAWV 946 Query: 927 FHEFFQQAAKAVASK---GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPA 983 Q A + +++ +SV V + E + + P+ L L + Sbjct: 947 LKTACLQLAVWADRPMTCNLILAVNVSVQQFKQVGFVEHIAELIRAYCIVPQRLKLELTE 1006 Query: 984 EAILDHAESVQK----LRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGN 1039 +L+ + + L+ G R+ + G + LK D L +D N+ + Sbjct: 1007 SVVLNDVSDIVQKMCALKSLGVRLSMDDFGTGYSSLSYLKNLPLDQLKIDQSFVRNIATD 1066 Query: 1040 LMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNS 1099 D +++ I AQ + IA V + L G G P++ + Sbjct: 1067 ENDAVMVKTIIAMAQNFRLNVIAEGVETEAQLAFLKQNGCMCYQGYYFGKPAPIEQFQSQ 1126 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 62/394 (15%), Positives = 135/394 (34%), Gaps = 21/394 (5%) Query: 301 ETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDL 360 E R + L +G +L N + + LG ++ + G T E + Sbjct: 73 EARLRTLFNTIKDLVWLKAPDGVYLACNPVVERMLGTAEAAIVGRTDYDFISREQADSFR 132 Query: 361 QQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRT 420 + ++ + + G + + V G + DI E KR Sbjct: 133 EHDRAAMNTGTVCINEGWLTFKDTGYCGLFETSKTPVYDDTGQLIGVFGIARDITERKRA 192 Query: 421 EQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHI---KPNWQVWYE 477 E + ++ + +G+ + I ++ +L + K ++ + Sbjct: 193 EAALKNSEQQARNLIDKLQVGVLLQSARAEILLCNQIALDLLGLSEAQLLGKSSFDPDWN 252 Query: 478 CVLPE-------DRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEV 530 + + + + SL + +R + +D + + A LN EV Sbjct: 253 VIHEDGSPFPGSEHPVPVSIATKSLVHDVVMGV-YRPSKRDRV-WLLVSAAPQLNPNNEV 310 Query: 531 ERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGW 590 E+++ +D+TE K++ E L E D + ++ ++ +I + N A G+ Sbjct: 311 EQVVCTFVDITERKKMEERL----ELTQFASDYAPDCILWVNEQARICYANEAALHCHGF 366 Query: 591 TQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITP 650 ++EE L + + + D + + + I + R G + + S Sbjct: 367 SKEELLSMTIHDLDPDFPPD---VWLAHWHELQHKGGITIETRHRRRDGSIFPIEVSANF 423 Query: 651 LSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASH 684 + G ++ +D+TE +K L YS Sbjct: 424 VKF--GDKEYNIAYHRDITERKKSEAALRYSEQR 455 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 71/414 (17%), Positives = 147/414 (35%), Gaps = 18/414 (4%) Query: 277 LLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLG 336 L+ + + + + SE RN ++ +G+ L + L N+ LG Sbjct: 176 LIGVFGIARDITERKRAEAALKNSEQQARNLIDKLQVGVLLQSARAEILLCNQIALDLLG 235 Query: 337 YSQEELRGLTFQQ----LTWPEDLNKDLQQ----VEKLISGEINTYSMEKRYYNRNGDVV 388 S+ +L G + + + + V ++ M Y D V Sbjct: 236 LSEAQLLGKSSFDPDWNVIHEDGSPFPGSEHPVPVSIATKSLVHDVVM-GVYRPSKRDRV 294 Query: 389 WALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELK 448 W L++ + + + + DI E K+ E+ + ++ A +W E + Sbjct: 295 WLLVSAAPQLNPNNEVEQVVCTFVDITERKKMEERLELTQF---ASDYAPDCILWVNE-Q 350 Query: 449 PNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRIT 508 I ++ + + + + P+ LQ + +E R Sbjct: 351 ARICYANEAALHCHGFSKEELLSMTI--HDLDPDFPPDVWLAHWHELQHKGGITIETRHR 408 Query: 509 VKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAV 568 +DG ++ + K G+ E + + D+TE K+ AL ++RL ++ GE + Sbjct: 409 RRDGSIFPIEVSANFV-KFGDKEYNIAYHRDITERKKSEAALRYSEQRLRDVSEASGEYL 467 Query: 569 VCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAI 628 ID+ + T+++ + ++ G+T E+ LG + D + N+ A + Sbjct: 468 WEIDINLGYTYVSNRSIEVKGYTPEQLLGHAPAEFMPPEDIDMAARIVNL--AISKNQPF 525 Query: 629 EQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSA 682 + SG S P G +G +++T + QL +A Sbjct: 526 KLQHRDITPSGAILWEEVSGVPFYDDAGHLLGLRGTGRNITGRKLKEEQLRVAA 579 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 87/273 (31%), Gaps = 9/273 (3%) Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQV 474 + + R+ +W + + + + Sbjct: 60 STEMQYPHPRGTDEARLRTLFNTIKDLVWLKAPDGVYLACNPVVERMLGTAEAAIVGRTD 119 Query: 475 WYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRH--IRALANRVLNKEGEVER 532 + + + E + R ++ + + E +T KD V + G++ Sbjct: 120 Y-DFISREQADSFREHDRAAMNTGTVCINEGWLTFKDTGYCGLFETSKTPVYDDTGQLIG 178 Query: 533 LLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQ 592 + GI D+TE K+ AL +++ +D + V+ +I N +A + G ++ Sbjct: 179 VFGIARDITERKRAEAALKNSEQQARNLIDKLQVGVLLQSARAEILLCNQIALDLLGLSE 238 Query: 593 EEALGVPLLTV-LHITFGDNGPLM--ENIYSADTSRSAIEQDV---VLHCRSGGSYDVHY 646 + LG ++ D P E+ + ++ DV V + Sbjct: 239 AQLLGKSSFDPDWNVIHEDGSPFPGSEHPVPVSIATKSLVHDVVMGVYRPSKRDRVWLLV 298 Query: 647 SITPLSTLDGSNIGSVLVIQDVTESRKMLRQLS 679 S P + V D+TE +KM +L Sbjct: 299 SAAPQLNPNNEVEQVVCTFVDITERKKMEERLE 331 >UniRef50_A8H6Y6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=13 Tax=Proteobacteria RepID=A8H6Y6_SHEPA Length = 1064 Score = 786 bits (2030), Expect = 0.0, Method: Composition-based stats. Identities = 215/1025 (20%), Positives = 412/1025 (40%), Gaps = 51/1025 (4%) Query: 104 GAVLLRKLLPWYNPLQNLADWLRLALGSAIVPPLLGGVLVVLLTPGDDP------LRAFL 157 A+LL +L + +N L L I + + V+L P R + Sbjct: 13 AALLLAIVLVYDAFPRNHKRSLDLLWRVGIGVLVAIITISVMLMPWQHSNGVFIDSRTVI 72 Query: 158 IWVLSESIGALALVPLGLLFKPHYLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFT 217 + V G + + +L + L ++ + T+ + + +L Y Sbjct: 73 LSVCGLFFGGVPTLVAVILSCLYRLSEGG--IAVWSGIGTIVSSGLMGYLWGKYRKGDI- 129 Query: 218 FIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLIL 277 +R+ + AF + +V ++ + T + +P L I Sbjct: 130 --------GDIRISELFAFGLMTHSVALL------WGLTMPTEIAINLLKQITVPLLAIF 175 Query: 278 LPANIMTMVMYAFRAE--RKHISESETH--FRNAMEYSAIGMALVGTEGQWLQTNKALCQ 333 ++ ++ + R E R + + H F++ +G+A+ +W++ N +LCQ Sbjct: 176 PITTVLLGILLSRRIEIERDQKIKLQDHLLFKSHFHSGNMGIAITDIAHEWIKVNPSLCQ 235 Query: 334 FLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLA 393 L Y+++EL L++ L +D + +++ G IN + ++ ++ +V+ + Sbjct: 236 MLKYTEQELLSLSWLDLMSADDFQLYKHHLLRMLDGRINEFELDLCLIAKDETIVYTHMT 295 Query: 394 VSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFS 453 V+ R L + ++ E+ E++ L + +G W+W+++ +I Sbjct: 296 VACQRVQSRVELIITGFLNRTSQK-EAEKEKLASQEQLGLVLGSSELGFWDWDIRNDIIE 354 Query: 454 WDKRMFELYEIP-PHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFK-LEFRITVKD 511 ++ L + ++W + + PEDR + I+ L + +E+RI Sbjct: 355 RNEHCAALLGCDIDTLNRQQKLWGDSIHPEDRVRVLRSIKAHLSGETEQHKVEYRIRTLA 414 Query: 512 GIRHIRALANRV--LNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVV 569 + +V ++ G R+ GI+ D+T+ K++ E+L + ++ EA+ Sbjct: 415 SETLWILDSGKVMSRDESGCPLRMCGIHTDITDRKRVEESL----KLAASVYNNSREAMS 470 Query: 570 CIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIE 629 D I +N ++G+T+ E + + +N E ++ A + Sbjct: 471 VQDDKGLIININAAFTDITGYTESEVKNQNIKILQC--SRNNRSAYEQMHMAVEEEGRWQ 528 Query: 630 QDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTH 689 +V L ++G + V ++ L + V + D+TE ++ + + A++D LT Sbjct: 529 GEVWLRRKNGEEFVVWLTLNALFDAEAQTQRHVALFSDITEKKQAEKIIWKQANYDTLTG 588 Query: 690 LANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLS 749 L NR L + +S Q AL+F+DLD FK VND+ GH GD LL E A + + Sbjct: 589 LPNRRMLLDYLNAEILKSDSREQHFALMFLDLDYFKEVNDTLGHDMGDMLLSEAAKRLKA 648 Query: 750 MLRSSDVLARLGGDEFGLLLPD-CNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGI 808 +R SDV+ARLGGDEF ++L +++ +A I++ + + + + AS GI Sbjct: 649 CIRDSDVVARLGGDEFTIVLSGVTDIKGVDKVAKHILTRIAE-PYNLGEETAYISASIGI 707 Query: 809 TLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKE 868 TL D+ ++ AD A YA+K+ GR R + P R + D + I + Sbjct: 708 TLYPDDASTIEGLLKHADQAMYAAKDEGRNRFHYFTPSMQRYAKYRMRLIQDLR-SAIAD 766 Query: 869 NQLMMLAHGVASPRIPEARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVF 927 ++ + + S + L +L W ++ F + L + VF Sbjct: 767 HEFELYYQPIVSLQ--GGLGLKAEALIRWRHPKRGLVSPIEFIAVAEETGLIIEIGNWVF 824 Query: 928 HEFFQQAAKAVASKGI--SISLPLSVAGLSSAT-LVNDLLEQLENSPLPPRLLHLIIPAE 984 + +Q+A GI IS+ S +N + L+ L + + I Sbjct: 825 QQAARQSALWRDRFGIEVQISINKSPVQFRDEGESINSWVNLLKTLNLTNNNICIEITEG 884 Query: 985 AILDHAESVQ----KLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNL 1040 +LD ++ + R +G +I L G LK D+L +D N+ N Sbjct: 885 LLLDGNSAISSKLTQYRDSGIQISLDDFGTGYSSLAYLKKFDIDFLKIDQSFTRNLDSNS 944 Query: 1041 MDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNSS 1100 D L I A +LGMK IA V L+ G D G + + P++ + Sbjct: 945 DDFTLCEAIIVMAHKLGMKVIAEGVETDYQRKILANAGCDFGQGYLFSRPVPVEKFEQAF 1004 Query: 1101 YFAIN 1105 +N Sbjct: 1005 LVPVN 1009 >UniRef50_Q3A4W5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4W5_PELCD Length = 1274 Score = 782 bits (2019), Expect = 0.0, Method: Composition-based stats. Identities = 180/829 (21%), Positives = 349/829 (42%), Gaps = 28/829 (3%) Query: 284 TMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGY-SQEEL 342 + + + SE +R+ ++++ G+ +G+ + N A+ L Y S +EL Sbjct: 416 AWTTLERKLTEESLQVSEQKYRHIVDHAPFGITRTTRDGKLISANPAMANILKYDSSQEL 475 Query: 343 R----GLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVR 398 + Q++ + +++ + +IS +++ R ++G + + + Sbjct: 476 LETIGRSSLQEVIFSNPADREDMVDKVIISNSWCLHNLSLR--CKDGSLATCRVHSRRLS 533 Query: 399 HTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWD-KR 457 + +EDI E T+Q Q+ + I E ++E+ L N +++ + Sbjct: 534 EKGSQNWEYENFLEDITEQLETQQTLQKNKKNIQQLAENTEAVLYEYNLSDNKWTYMAPQ 593 Query: 458 MFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIR 517 + ++ P + Q W + V D A + L + +E+R KDG Sbjct: 594 VERIFGYKPEDWIDNQFWLDRVHEADWGKASREELSKLNQQEAHSIEYRFYKKDGSIVWV 653 Query: 518 ALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKI 577 R+ + L G+ +D+T+ KQ L + L ++ +VV D +I Sbjct: 654 RDIIRIESDAENKLCLHGLLIDITDSKQSESQLKK----LSRAIEQSPVSVVITDPEGRI 709 Query: 578 TFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCR 637 ++NP +++G+T EE + + + + ++++ TS ++ + Sbjct: 710 EYVNPKFTQLTGYTLEEVIAQNPRILKSGNLLPS--VYDSLWKTITSGKEWYGELENKRK 767 Query: 638 SGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFE 697 G + SI+PL G I + V +D+T+ + ++L Y A+HD LT LANR Sbjct: 768 DGSIFWESASISPLFDESGKIINFIGVKEDITQRKLNEKRLEYMATHDGLTGLANRTLLY 827 Query: 698 KQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVL 757 L I L + + A++ +DLDRFK +NDS GH GD +L+ + + +RS+D + Sbjct: 828 DHLEIALHQSQRSKKLVAVILLDLDRFKVINDSLGHLVGDQVLKAVGQRLKQYVRSTDTV 887 Query: 758 ARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNH 816 ARLGGDEF +LL D + +A IA ++ +N+ F+ GR V AS GI L + +N Sbjct: 888 ARLGGDEFVVLLTDVRDTTAAGKIAHNLLRKLNEPFFL-HGRELYVSASFGICLSETDNV 946 Query: 817 QAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAH 876 ++ ADIA Y +K G G Y + + M + + +++N+ + Sbjct: 947 DGTILLRNADIAMYKAKAEGCGLY-FYSHEMNEHLIKTLEME-NSLRQALEKNEFQLYYQ 1004 Query: 877 GVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAA 935 R + +L W + +I F + L + V E +Q+ Sbjct: 1005 PKV--EHATGRIIGCEALLRWRHPQRGMIPPSEFIPLAEETGLIVQIGHWVLAEACRQSK 1062 Query: 936 KA--VASKGISISLPLSVAGLSS-ATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA-- 990 +++++ +S L+ + LE S L P L L + ++ A Sbjct: 1063 IWETEGLPPLTMAVNISARQFYQGENLIQAVKSTLERSQLVPSQLELELTESMVMKDAVN 1122 Query: 991 --ESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITI 1048 +++K++ G + L G N L++ D L +D ++ + ++ Sbjct: 1123 AERTMRKIKQLGVSLSLDDFGTGYSSLNYLRSFPVDSLKIDRSFILDIASDASSAAILNS 1182 Query: 1049 IQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 I A LG++T+A V + ++ G + I G + + P + V Sbjct: 1183 IIAIAHTLGLQTVAEGVENNDQLALVANCGCNYIQGYLFSRPLPPEDFV 1231 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 91/517 (17%), Positives = 173/517 (33%), Gaps = 64/517 (12%) Query: 220 IVLLMWSAVRLPRMEAFLIF-------LTTVMMVSLMMAADPSLLATPRTYLMSHMPWLP 272 + L+ A+ L A +++++ + D + + + M + P Sbjct: 51 VPDLVLIAIDLHDENAIETLTLPPEDAPCPIIVMATKVKED-AAMEVLKAGAMDFIVKSP 109 Query: 273 FLLILLPANIMTMVMYAFRAERKHISESET-HFRNAMEYSAIGMALVGTEGQW--LQTNK 329 + LP + ++ + + + E E ++ S + E W + +K Sbjct: 110 EAIRELPHRVARVLDHWRVRQDNTLLEMELCQANLIVDNSPAVLFHWKAEDGWPIVSVSK 169 Query: 330 ALCQFLGYSQEELRGLTFQ--QLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDV 387 + Q GY+QEEL F L P+DL++ ++++ I+ + E R + +V Sbjct: 170 NISQ-FGYAQEELMSGDFSYATLVHPKDLDRLEEELQAQINRGERIFQTEYRIITKQKEV 228 Query: 388 VWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWEL 447 W + R G ++ I DI+E KRTE V M + LA + E L Sbjct: 229 RWVDERTFVERDAAGKVSHYQGFIIDIDERKRTELVMAARMRLLQLATNNTLAQLLEATL 288 Query: 448 KP----------------------NIFSWDKR----MFELYEIPPHIKPNWQ-VWYECVL 480 ++ +W +R + H VW +C+ Sbjct: 289 DEAEALTESRMGFYHFLEDDQKTLSLQAWSRRTKSDFCNIEGAGLHYPLEKAGVWVDCI- 347 Query: 481 PEDRQHAEKVIRDSL-------QSRSPFKLEFRITVKDGIRHIRAL-----ANRVLNKEG 528 +R+ SL + P E + V G + + L A ++ Sbjct: 348 -RERRAVFHNDYASLPHANGLPKGHPPIVRELVVPVFRGEKIVAVLGMANKAEAYTQRDA 406 Query: 529 EVERLLG-INMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKM 587 E LL E K E+L +++ +D + K+ NP + Sbjct: 407 EAASLLADFAWTTLERKLTEESLQVSEQKYRHIVDHAPFGITRTTRDGKLISANPAMANI 466 Query: 588 SGWTQE----EALGV-PLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSY 642 + E +G L V+ D +++ + S S ++ L C+ G Sbjct: 467 LKYDSSQELLETIGRSSLQEVIFSNPADREDMVDKV---IISNSWCLHNLSLRCKDGSLA 523 Query: 643 DVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLS 679 LS N ++D+TE + + L Sbjct: 524 TCRVHSRRLSEKGSQNWEYENFLEDITEQLETQQTLQ 560 >UniRef50_C6XCZ6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XCZ6_METSD Length = 869 Score = 779 bits (2011), Expect = 0.0, Method: Composition-based stats. Identities = 199/882 (22%), Positives = 366/882 (41%), Gaps = 40/882 (4%) Query: 223 LMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSL-LATPRTYLMSHMPWL-PFLLILLPA 280 L ++A+R+P + V V +MA+D +L L P ++H L L ILL A Sbjct: 8 LRYAAIRIPL-------IYCVFAVLWIMASDQTLALLLPEAASITHFQTLKGLLFILLTA 60 Query: 281 NIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQE 340 ++ +++ R+ + S + + ++ + L +G+ + N + GY+++ Sbjct: 61 ALLYHLIH-----RQQLLAS--RYNSLTVHANDSILLFDHQGKLVDANDRALRMYGYTRD 113 Query: 341 ELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHT 400 +++ + +QL D D + L + N E + + +G ++ L++ Sbjct: 114 QMQHIHARQLLP--DAASDWRSCF-LAEAQHNGIIFESEHKHADGSTFSVEVSACLLKI- 169 Query: 401 DGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFE 460 G Y A + DI E R + ++ + + + IG WE++++ I SW + + Sbjct: 170 -GGSDYIQAIVRDITERLRVVEKLRESEQLLAHMSAIAHIGGWEFDVETGIGSWTREVAH 228 Query: 461 LYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA 520 ++ + + + E R+ E I+ ++ P+ LE + GIR Sbjct: 229 IHGVEFKDNISAEFGLGFYEAESREKIEAAIQQAIDHGKPYDLELELVTARGIRKWVRTV 288 Query: 521 NRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFM 580 +G V +L G D+++ K + + + ++ EA++ +D +I + Sbjct: 289 CTPHIIDGRVLKLQGSFQDISDRKVAEDKM----RLATLVFENSSEAIMVVDAESQILSV 344 Query: 581 NPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGG 640 NP +M+G+T +E +G + + + E ++ S + +V ++G Sbjct: 345 NPAFTEMTGYTAQEVVGKTPKIL--ASGKQDRKFYEEMWHLLDSNGKWQGEVWNRRKNGE 402 Query: 641 SYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQL 700 SY +I + G I V + D+T++++ + A+ D LT L NR +L Sbjct: 403 SYAEWLTIDTIYNEHGEVIRRVALFSDITKNKQNQEVIWRQANFDQLTGLPNRRMLHDRL 462 Query: 701 RILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARL 760 + + HQ A++F+DLDRFK VND+ GH GD LL+E A +L +R D +ARL Sbjct: 463 NQEILKADRNHQMLAVLFLDLDRFKEVNDTYGHLMGDQLLQESAHRLLHSVRECDTVARL 522 Query: 761 GGDEFGLLLPDCNVESARF-IATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAA 819 GGDEF ++L + IA I+ D F + + V S GIT+ ++ + Sbjct: 523 GGDEFVVILSGLQDKDVVQDIAQSILKKF-DTPFQLDNDLTHVSVSIGITIYPEDGNAGE 581 Query: 820 EVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVA 879 + AD A Y +KN GR R + + A R +S D + Q + + Sbjct: 582 VLFKNADQAMYVAKNNGRNRYSYFTASMQAHAQNRMRLSNDLHL-ALPGQQFELYYQPIV 640 Query: 880 SPRIPEARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAK-- 936 + + +L W +I F + L + VF+E +Q + Sbjct: 641 --ELATGQVHKAEALLRWQHPTRGMIPPDNFIPLAEETGLIVDIGNWVFYEAARQVKRLQ 698 Query: 937 AVASKGISISLPLSVAGLSSAT-LVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQK 995 ++ IS+ S + T + L + LP + + + I ++ ES+ Sbjct: 699 SLHHASFQISINKSPVQFHNETHGHEAWISFLLMNDLPRQSIVVEITEGLLMHTDESISA 758 Query: 996 ----LRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQG 1051 R AG ++ L G + LK DYL +D N+ N D L I Sbjct: 759 QLLGFRDAGVQVALDDFGTGYSSLSYLKKFDIDYLKIDRIFVRNLSRNSSDMALCEAIVM 818 Query: 1052 HAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPL 1093 A +L +K IA + + L IG D G + + P Sbjct: 819 MAHKLDIKVIAEGIETEEQRELLQQIGCDFGQGYLFSPPLPA 860 >UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3L4_9PROT Length = 900 Score = 778 bits (2010), Expect = 0.0, Method: Composition-based stats. Identities = 178/900 (19%), Positives = 347/900 (38%), Gaps = 48/900 (5%) Query: 227 AVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMT-- 284 A+RL + A L + + + + T L + F +++ + ++ Sbjct: 8 ALRLALIYAAFGLLWISLSDRFL-----ASVITDSASLTKFQTYKGFCYVVITSALVYFL 62 Query: 285 --MVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEEL 342 M + + +SE ++ A+E + G+ + +K + +GY++ E Sbjct: 63 AKQTMKQNFLTEEKLHDSEERWKFALEGAGDGVWDWNPQTDEAFFSKRWNEIIGYTEHEF 122 Query: 343 --RGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLV-RH 399 G + P+D ++ L ++ ++ Y +E R ++G W L LV R Sbjct: 123 PATGSAWVAHLHPDDKDRVLSVIQGYLTDSREIYDVEYRIRCKDGSWKWILARGMLVSRD 182 Query: 400 TDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMF 459 G PL I DI + K E++ + +E+ + IG+ K I ++ + Sbjct: 183 VYGKPLRMIGTHSDITQRKVDEELVLKNLEKWKKLFDILPIGVSIVNSKNGIVDFNPSLE 242 Query: 460 ELYEIPPH--IKPNWQVWY----ECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGI 513 + I ++ ++ W + + +R + R + + + G Sbjct: 243 AILGISKEGLLQGDYDNWEYLRTDNTHMD--ADEFPSLRAIKEQRVVKDVVIGVKKESGD 300 Query: 514 RHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDM 573 +++ L+ + + + D+T+ KQ L E ++ D Sbjct: 301 IIWTSVSAAPLSYDSNSC--VTVTTDITKRKQFESELRVSATAFE-----TQEGILITDE 353 Query: 574 AMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVV 633 + N ++G+T +EA+G + + N ++ A + E ++ Sbjct: 354 NNVMLRTNAAFTAITGYTNKEAIGQNPRLL--SSGRQNASFYSAMWKAINTTGVWEGEIW 411 Query: 634 LHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANR 693 ++G Y H ++T + +G V V+ D+T+ + ++ A D LT L NR Sbjct: 412 NRRKNGEIYPEHLTVTAVKDRNGMVTNYVGVLSDLTQRKAAEEKIENLAFFDPLTKLPNR 471 Query: 694 ASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRS 753 +L+ + + + A++FIDLD FKA+ND+ GH GD LL+++A ++S +R Sbjct: 472 RLLLDRLKQAMASATRSVTNGAVLFIDLDNFKALNDTYGHPMGDLLLQQVAKRLVSSVRD 531 Query: 754 SDVLARLGGDEFGLLLPDCNVE------SARFIATRIISAVNDYHFIWEGRVHRVGASAG 807 D ++R GGDEF +LL + A + +I +A+ ++ + +S G Sbjct: 532 GDTVSRFGGDEFVVLLEGFDENPLDAASQAETVGEQIFAALRQ-PYLIGTHEYHGTSSIG 590 Query: 808 ITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIK 867 TL +D E+M QADIA Y +K GR + ++PQ ++R A+ D + + I+ Sbjct: 591 ATLFNDKQQSIDELMKQADIAMYQAKKEGRNVLRFFDPQMQETIAKRTALEGDLR-KAIE 649 Query: 868 ENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRV 926 +Q + +L W E ++ F + L + V Sbjct: 650 NHQFQLHYQIQVD---ESRHPFGAEALIRWFHPEHGMVSPDQFIPLAEESDLILPIGYWV 706 Query: 927 FHEFFQQAAKAVAS---KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPA 983 + + G +S+ +S VN + ++ + P LL L + Sbjct: 707 LETACARIQRWQHDAKTSGFVLSVNVSAKQFRQTDFVNQVQSLIQQYEINPSLLKLELTE 766 Query: 984 EAILDHAE----SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGN 1039 +LD+ E ++ L+ G + L G LK D L +D ++ + Sbjct: 767 SMLLDNIEDTIATMSALKELGVKFSLDDFGTGYSSLQYLKRLPLDQLKIDQSFVRDIAVD 826 Query: 1040 LMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNS 1099 D ++ I A L + IA V LS G G + P++ S Sbjct: 827 ASDRAIVRTIIAMAHSLDLDVIAEGVETEEQQKHLSSKGCKNFQGYLFGKPVPIEQFETS 886 >UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K3A1_AZOSB Length = 818 Score = 773 bits (1997), Expect = 0.0, Method: Composition-based stats. Identities = 168/806 (20%), Positives = 326/806 (40%), Gaps = 18/806 (2%) Query: 301 ETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDL 360 ++ R ++ + G++L N+A + G + EL G T + L + Sbjct: 18 DSLLRALIDVIPDLVFFKDEAGRYLGCNRAFEAYTGRREAELIGYTDRDLFDLSTADSYR 77 Query: 361 QQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRT 420 +++ ++ + E +G V + R + D+ + T Sbjct: 78 GYDNAVLASGRSSRNEEW-IVYPDGRRVLVDTLKTPFRDAASGRRGVVGISRDVTVFRET 136 Query: 421 EQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVL 480 + ++ E + A G W + W L+ P P+++++ V Sbjct: 137 AEALRRSQENLERAQAVARTGSWYVDFVSGQMDWSAETCRLFGQAPGCVPSYELFLSVVH 196 Query: 481 PEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDM 540 PED+ E R ++ +R + L R+ V +R + A +G +G D+ Sbjct: 197 PEDQALVEAAWRQAV-ARGDYDLTHRVIVGGEVRWVHERAEFRRAADGAALAGIGTVQDI 255 Query: 541 TEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPL 600 T+ K ++L Q ++ GE V+ D +I +N ++G+ EE +G Sbjct: 256 TDRKLAEQSLRQ----AATVFENTGEGVIIADAKNRIIAVNRAFTVITGYGPEEVIGRSP 311 Query: 601 LTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIG 660 + + + + ++ + ++ ++G + +++ + +G Sbjct: 312 NLLR--SGRHDAAYYDAMWRGVHEAGHWQGEIWNRRKNGEIFPELLTLSVVRDHNGKVSH 369 Query: 661 SVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFID 720 V V D++ ++ +L A +DALT L NR +L ++ V + + A++F+D Sbjct: 370 YVGVFSDISRMKETEARLQRLAHYDALTDLPNRVLLNLRLAHGVERVQRSGEMLAVLFLD 429 Query: 721 LDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARF 779 +DRFK VNDS GH GD LL E+A + S +R+ D LARLGGDEF +LL + Sbjct: 430 IDRFKNVNDSLGHPVGDELLIEIARRLRSRIRAEDTLARLGGDEFVILLDRIRSANDVAD 489 Query: 780 IATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGR 839 A II +N + G+ VGAS GI+L + A +++S AD A Y +K GR Sbjct: 490 FAQEIIDLLNQSFQLASGQEVFVGASIGISLYPLDTDDATQLISNADAALYQAKEAGRNV 549 Query: 840 VTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSC 899 Y A ER + + R ++ + ++ V + + + + +L W+ Sbjct: 550 YRFYTADLTRAAHERLGLEAALR-RGLERGEFVLHFQPVVA--LDKGEVVGAEALVRWNH 606 Query: 900 EG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVA-SKGISISLPLSVAGLSSA 957 +I F + L L V +Q + + + ++I++ LS + Sbjct: 607 PTEGMIAPLRFIPLAEETGLIVPLGEWVLESACRQGREWLDCGRPLTIAVNLSTRQFRAG 666 Query: 958 TLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLSQVGRDLQ 1013 L + + L+ + P LL L I +++ A+ ++ L+ G R+ + G Sbjct: 667 DLTATVRDILDRTGFPAALLELEITESTVMEDADRAVATLAALKGLGVRLSIDDFGTGYS 726 Query: 1014 IFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDT 1073 LK D L +D ++ + D M++ + A ++ + IA V + Sbjct: 727 SLAYLKRFAVDALKIDRSFVRDIADDENDRMIVATVVAMAHQMRLGVIAEGVETAEQLAF 786 Query: 1074 LSGIGVDLIYGEVIADAQPLDLLVNS 1099 L +G + G ++ Q + + Sbjct: 787 LRSLGCEAYQGYLVGRPQAAADFLGA 812 Score = 89.2 bits (220), Expect = 9e-16, Method: Composition-based stats. Identities = 53/357 (14%), Positives = 118/357 (33%), Gaps = 18/357 (5%) Query: 280 ANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQ 339 A + + +RK +S E + G+ + + + + N+A GY Sbjct: 244 AALAGIGTVQDITDRKLAEQSLRQAATVFENTGEGVIIADAKNRIIAVNRAFTVITGYGP 303 Query: 340 EELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRH 399 EE+ G + L + + + E + E +NG++ LL +S+VR Sbjct: 304 EEVIGRSPNLLRSGRHDAAYYDAMWRGVH-EAGHWQGEIWNRRKNGEIFPELLTLSVVRD 362 Query: 400 TDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMF 459 +G +++ DI+ +K TE Q+L L + + L +R Sbjct: 363 HNGKVSHYVGVFSDISRMKETEARLQRLAHYDALT-DLPNRVLLNLRLAHG-VERVQRSG 420 Query: 460 ELYEIPPHIKPNWQVWYECV-LPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRA 518 E+ + ++ + + P + ++ R R+ + + Sbjct: 421 EMLAVLFLDIDRFKNVNDSLGHPVGDELLIEIARRLRSRIRAEDTLARLGGDEFVI---- 476 Query: 519 LANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKIT 578 +L++ + ++ ++ + L +E SIG ++ +D Sbjct: 477 ----LLDRIRSANDVADFAQEIIDLLNQSFQLASGQEVFVGA--SIGISLYPLDTDDATQ 530 Query: 579 FMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLH 635 ++ + + +EA G + + A R + VLH Sbjct: 531 LISNADAAL--YQAKEA-GRNVYR-FYTADLTRAAHERLGLEAALRRGLERGEFVLH 583 >UniRef50_Q2BQI6 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQI6_9GAMM Length = 955 Score = 767 bits (1981), Expect = 0.0, Method: Composition-based stats. Identities = 166/816 (20%), Positives = 324/816 (39%), Gaps = 24/816 (2%) Query: 294 RKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWP 353 K + ESE +R +E I + G+ + N++ C+ G + E+L G F L Sbjct: 141 EKALRESEQRYRGVVEDFPIMICTYKPGGEIIFVNQSYCKLFGRTSEDLVGSNFLDLIPE 200 Query: 354 EDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIED 413 D + + L + + T+ E R ++ W + + G + + ED Sbjct: 201 GDRPALISNISGLNTSK-PTFVNEHRVILPGDNIGWQRWTNRAIFNRQGEIESYQSIGED 259 Query: 414 INELKRTEQVNQQLMERITLANEAGGIGIWEWELKPN--IFSWDKRMFELYEIPPH--IK 469 I + E+ + +++ ++ N + R E++ IK Sbjct: 260 ITQRMIQERALESSEAQLSTLIGNLPGVAFQCLNNRNWTMLYLSDRCEEIFGYTAESLIK 319 Query: 470 PNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGE 529 + + + + P R++ +++SL++++P+K+ +++ G R ++ + Sbjct: 320 SRYCSYAQLIEPGYREYVWAAVQNSLKTQTPYKVLYKLKHSSGESRWMEEQGRGVSTDST 379 Query: 530 VERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSG 589 + G D+TE + L Q S GE V D I +N K++G Sbjct: 380 GLTIEGYIEDVTERIEAENRLNQ----AAAVFRSTGEGVAITDQNGTIVDVNEAFTKITG 435 Query: 590 WTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSIT 649 + ++E +G + + + EN++ +V +SG Y +I+ Sbjct: 436 FDRDEVIGKNTRILQ--SGKHDIAFYENMWEQIQKHGHWRGEVWNRAKSGTIYPEILTIS 493 Query: 650 PLSTLDGS-NIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVN 708 + G G V V D+T ++ +L + A +DALT L NR F ++L L Sbjct: 494 AIDFKKGQQPSGYVGVFADITSLKETEARLDHLAHYDALTELPNRLLFRERLIHSLLMSE 553 Query: 709 STHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLL 768 + A++F+DLDRFK +ND+ GH GD LL E+AS + ++R D + R+ GDEF L+ Sbjct: 554 RKKTKVAVLFLDLDRFKNINDTLGHGVGDILLAEIASRLRHVVRMGDTVGRISGDEFCLI 613 Query: 769 LPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADI 827 L D +V I +I+S + + ++ AS G+ + DN++ A ++S +D Sbjct: 614 LEDIQDVTDVVPIVEKILSVFSQTI-QINSHMLQISASIGVAISPDNSNDADALLSFSDS 672 Query: 828 ACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEAR 887 A Y +K GR Y + E + + + ++++Q + RI + Sbjct: 673 AMYEAKEAGRNTYKFYTAEMTQQALEHSFVQSALR-DALEQSQFFVTYQP--QLRIKDYS 729 Query: 888 NLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK--GIS 944 + + +L W E +I +F + L L + +Q + + + Sbjct: 730 MVGVEALVRWQHPERGLIPPDSFIPIAENSGLIRELGAWILRTACEQGVQWLNEQVNFGR 789 Query: 945 ISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAG 1000 I + +S L + ++ L+ + P L L + I+ + + + G Sbjct: 790 IYVNVSATQLHDESFTEAVIMCLKETGFPAEKLGLEVTESFIMKDPQHAINVLSSFKEIG 849 Query: 1001 CRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKT 1060 + + G + LK D L +D ++ + D + + + L ++ Sbjct: 850 IELAIDDFGTGYSSLSYLKQLPIDKLKIDQSFIRDIPDDPNDMAIAEAVIAMGKALNLEV 909 Query: 1061 IAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 IA V + D L + G + A D Sbjct: 910 IAEGVESQIQADFLLDKECTEVQGYLYAHPLTADAF 945 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 68/402 (16%), Positives = 147/402 (36%), Gaps = 9/402 (2%) Query: 295 KHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQ---LT 351 + + S F ++ MA++ +G+ + N+ GY++E+ G F + Sbjct: 12 EKLKNSSDLFEIVFDHQFQFMAILEPDGRVISVNQVALSQQGYTREDFVGRYFWESASWR 71 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 D ++ K + + Y +G + A + +DG ++ Q Sbjct: 72 HLPDWEAIWKKRLKAAYENRSPIFTDDVYEAHDGSIRHADAVTIALFDSDGKLNGYLIQA 131 Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPN 471 D + E+ ++ +R E I I ++ I ++ +L+ Sbjct: 132 IDKTDKAIAEKALRESEQRYRGVVEDFPIMICTYKPGGEIIFVNQSYCKLFGRTSEDLVG 191 Query: 472 WQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVK-DGIRHIRALANRVLNKEGEV 530 + + + DR I S+ F E R+ + D I R + N++GE+ Sbjct: 192 -SNFLDLIPEGDRPALISNISGLNTSKPTFVNEHRVILPGDNIGWQRWTNRAIFNRQGEI 250 Query: 531 ERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKIT--FMNPVAEKMS 588 E I D+T+ AL + +L + ++ T +++ E++ Sbjct: 251 ESYQSIGEDITQRMIQERALESSEAQLSTLIGNLPGVAFQCLNNRNWTMLYLSDRCEEIF 310 Query: 589 GWTQEEALGVPLLTVLHI-TFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYS 647 G+T E + + + G + + ++ +++ + L SG S + Sbjct: 311 GYTAESLIKSRYCSYAQLIEPGYREYVWAAVQNSLKTQTPYKVLYKLKHSSGESRWMEEQ 370 Query: 648 ITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTH 689 +ST D + + I+DVTE + +L+ +A+ T Sbjct: 371 GRGVST-DSTGLTIEGYIEDVTERIEAENRLNQAAAVFRSTG 411 Score = 73.8 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 59/161 (36%), Gaps = 5/161 (3%) Query: 278 LPANIMTMVMYAFRAERKHISESETHFRNA---MEYSAIGMALVGTEGQWLQTNKALCQF 334 + + + + + + E+E A + G+A+ G + N+A + Sbjct: 374 VSTDSTGLTIEGYIEDVTERIEAENRLNQAAAVFRSTGEGVAITDQNGTIVDVNEAFTKI 433 Query: 335 LGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAV 394 G+ ++E+ G + L + + + + I + + E ++G + +L + Sbjct: 434 TGFDRDEVIGKNTRILQSGKHDIAFYENMWEQIQ-KHGHWRGEVWNRAKSGTIYPEILTI 492 Query: 395 SLVRHTDG-TPLYFIAQIEDINELKRTEQVNQQLMERITLA 434 S + G P ++ DI LK TE L L Sbjct: 493 SAIDFKKGQQPSGYVGVFADITSLKETEARLDHLAHYDALT 533 Score = 55.7 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 52/148 (35%), Gaps = 4/148 (2%) Query: 540 MTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVP 599 MT + E L + I D + + ++ ++ +N VA G+T+E+ +G Sbjct: 4 MTNDSKFLEKLKNSSDLFEIVFDHQFQFMAILEPDGRVISVNQVALSQQGYTREDFVGRY 63 Query: 600 LLT---VLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDG 656 H+ + + + +A +RS I D V G L DG Sbjct: 64 FWESASWRHLPDWE-AIWKKRLKAAYENRSPIFTDDVYEAHDGSIRHADAVTIALFDSDG 122 Query: 657 SNIGSVLVIQDVTESRKMLRQLSYSASH 684 G ++ D T+ + L S Sbjct: 123 KLNGYLIQAIDKTDKAIAEKALRESEQR 150 >UniRef50_C6XBJ6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBJ6_METSD Length = 1150 Score = 761 bits (1966), Expect = 0.0, Method: Composition-based stats. Identities = 185/864 (21%), Positives = 347/864 (40%), Gaps = 29/864 (3%) Query: 250 MAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAME 309 +L Y+ + L + ++ I+ ++ + + + ++ + ++ Sbjct: 294 WVGQSPVLLPYSRYIAPALGLLSLVGAIVLLWIL-LLRRSVKTKTAELANQHQRLQQIID 352 Query: 310 YSAIGMALVG-TEGQWLQTNKALCQFLGYSQEELRGLT---FQQLTWPEDLNKDLQQVEK 365 +A G G + N + LGY+ +EL T + L P+DL + +Q +E Sbjct: 353 GTAAGTWEWDIRSGDCI-VNPRWAEMLGYTPDELEPCTADSCRALCHPDDLEQLVQALEA 411 Query: 366 LISGEINTYSMEKRYYNRNGDVVWALLAVSLVRH-TDGTPLYFIAQIEDINELKRTEQVN 424 + GE + ++ E R ++NG +W + R G L +I +LK E Sbjct: 412 HLRGETDYFASESRRRHKNGHWIWVADRGRVTRRSPQGEALTMSGTRLEITKLKLAETTL 471 Query: 425 QQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDR 484 +Q +E+ + + I + ++ + + E + + V P+ Sbjct: 472 KQAVEQQKMFIQQAPICVAMFDRDMRYLACSNQWQEEFGHQQGSLLGLN--HYDVHPDIP 529 Query: 485 QHAEKVIRDSLQSRSPFKLE-FRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEV 543 + + + +L + E I R + ++ ++ ++ + +++ Sbjct: 530 EKWRQAHQRALAGERLEEEEDLWIRADGQHLWTRWMITPWMDDSQTIQGIIISSENISAR 589 Query: 544 KQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTV 603 KQ E L H + EA++ D I +NP +M+G++ EE +G + Sbjct: 590 KQAEEEL----RLAHTVFEHSSEAMLVTDADNNIITINPAFSEMTGYSLEEVIGKNPKIL 645 Query: 604 LHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVL 663 + + +++ + ++ +SG Y +I + + DG V Sbjct: 646 --SSGRQGKEFYQELWNTLETSGEWRGEIWNRRKSGEEYAEWLAINNIYSEDGKLFRRVA 703 Query: 664 VIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDR 723 + D+TE ++ + A++D LT L NR F +L+ ++ H + AL+FIDLDR Sbjct: 704 LFSDITEKKRADALIWNQANYDLLTQLPNRRLFSDRLQQEIKKSQHDHSQFALLFIDLDR 763 Query: 724 FKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARF-IAT 782 FK VND+ GH+ GD LL E + + L+ +D + RLGGDEF +++ + S IA Sbjct: 764 FKEVNDTLGHSHGDYLLIEASHRIQRHLKETDTVGRLGGDEFTVIIANLPDPSVMTLIAQ 823 Query: 783 RIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTV 842 R++ A+ + EG + + AS GIT+ ++ +AE++ AD A Y +K GR R + Sbjct: 824 RVLDALAA-PYDLEGEIVYLSASIGITVFPEDATTSAELLKNADQAMYEAKKNGRNRFSF 882 Query: 843 YEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEG 901 + P A R M D + + NQ + + + R +L W E Sbjct: 883 FTPMMQAMAQARMRMMRDLR-NALGLNQFTVYFQPIVD--LSSQRIHKAEALIRWQHPEL 939 Query: 902 EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVA--SKGISISLPLSVAGLSSATL 959 I F + L H + VF + Q + + +S+ S T Sbjct: 940 GFISPAEFIPLAEETGLIHEIGDWVFQQSAQLVKQCIPIVGDDFQVSVNKSPVQFRDRTQ 999 Query: 960 V-NDLLEQLENSPLPPRLLHLIIPAEAILDH----AESVQKLRLAGCRIVLSQVGRDLQI 1014 D +E L L + + I +L+ ++ + R AG ++ + G Sbjct: 1000 AHQDWMEYLSGLGLSGHNIVVEITEGLLLNADSGISDKLLHFRDAGMQVAIDDFGTGYSS 1059 Query: 1015 FNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTL 1074 + LK DYL +D N+ G D L I A +L ++ IA V D L Sbjct: 1060 LSYLKKFDIDYLKIDQSFVRNLSGEGEDLALCEAIATMAHKLDLRVIAEGVETTAQRDLL 1119 Query: 1075 SGIGVDLIYGEVIADAQPLDLLVN 1098 + IG D G + + P + + Sbjct: 1120 AQIGCDYGQGYLFSRPVPAEEFMQ 1143 >UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q47GC0_DECAR Length = 862 Score = 761 bits (1965), Expect = 0.0, Method: Composition-based stats. Identities = 173/842 (20%), Positives = 324/842 (38%), Gaps = 58/842 (6%) Query: 294 RKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWP 353 + + SE + + + + + G N+ + + LGY EL G + + L Sbjct: 13 EQALRTSEARLHSFFDATPDALLISDAHGTITMANQQVEKLLGYVAAELVGKSIEDLV-- 70 Query: 354 EDLNKDLQQVEKLISGEINTYSMEKRY--------YNRNGDVVWALLAVSLVRHTDGTPL 405 + ++ E +R ++G +++S + +G + Sbjct: 71 ---PNRFKASHPVLRSEFTASPRARRMGNGMAVKARRKDGSECDVDVSLSRIETDEG--M 125 Query: 406 YFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIP 465 +F + + DI+E KR E+ ++ ++ ++ GI ++ + +++ + L ++P Sbjct: 126 FFASALRDISERKRKEEELRRQNGVLSTIFQSFPGGITLFDADLRLVAFNDQFKALLDLP 185 Query: 466 P----------HIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRH 515 + P D + I + P K+E R+ Sbjct: 186 DVLFEQPEPDFETLIRYNAARGEYGPGDPEQQVAAIIARTKKFVPHKIE-RVRPDGTSLS 244 Query: 516 IRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAM 575 IR V G L I D+T+ KQ E L +S ++ D Sbjct: 245 IRG----VPLASG---GFLSIYTDITDRKQSEEQL----RIAAAAFESQTCMII-TDANR 292 Query: 576 KITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLH 635 I +N + +G++ EEA+G + G + ++ A + ++ Sbjct: 293 VIQRVNRAFIETTGYSAEEAVGQTPRLLQSGRHGAD--FYREMWETIHRTGAWQGEIWGR 350 Query: 636 CRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRAS 695 ++G Y SI+ + +G + D+TE +K +++ A D LT L NR Sbjct: 351 RKNGEVYPKWLSISAVVGTNGRVSHYIGTHNDITERKKAEERINALAFFDQLTGLPNRTL 410 Query: 696 FEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSD 755 +L+ + + + AL+FIDLD FK +ND+ GH GD LL+++A + +R D Sbjct: 411 LLDRLKQTILSSGRSDSHGALLFIDLDNFKTLNDTLGHDVGDQLLKQVALRLTHCVRDGD 470 Query: 756 VLARLGGDEFGLLLPDCN------VESARFIATRIISAVNDYHFIWEGRVHRVGASAGIT 809 +ARLGGDEF ++L + N + +A +I++ +N + H AS G T Sbjct: 471 TVARLGGDEFVVVLANLNTNDKEAAQDTETVAEKILATLNQT-YQLGHVTHHSSASIGAT 529 Query: 810 LIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKEN 869 L ++M QAD++ Y +K GR V ++P A RA M D+ R + E Sbjct: 530 LFKGPLIPIDDLMKQADLSMYKAKAAGRNAVRFFDPSMEIAVKVRAEME-DDLLRALAEK 588 Query: 870 QLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHE 929 Q ++ + E + L+ + ++ F + L L V Sbjct: 589 QFLLHYQAQM---VGERLTGAEVLLRWQHPQRGMVSPAEFIPLAEETGLILPLGHWVLET 645 Query: 930 FFQQAAKAVASK---GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAI 986 Q A+ +++++ +S V+ +L LE + P+ L L + + Sbjct: 646 ACTQLAQWAGRPEVAHLTLAVNVSAHQFRQNDFVDQVLGVLEKTGANPQRLKLELTESLL 705 Query: 987 LDHAESV----QKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMD 1042 +++ E + L+ G L G + LK D+L +D +V + D Sbjct: 706 VENVEDIIDKMAALKHRGVGFSLDDFGTGYSSLSYLKRLPLDHLKIDQSFVRDVLTDSND 765 Query: 1043 EMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNSSYF 1102 + I A LG+ IA V D L+ G G + P++ + + Sbjct: 766 ASIARTIVALANSLGLGVIAEGVETEAQRDFLASSGCHTYQGYYFSRPLPIEDFESFTLT 825 Query: 1103 AI 1104 AI Sbjct: 826 AI 827 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 64/139 (46%), Gaps = 4/139 (2%) Query: 545 QLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVL 604 +L +AL + RLH D+ +A++ D IT N EK+ G+ E +G + ++ Sbjct: 11 RLEQALRTSEARLHSFFDATPDALLISDAHGTITMANQQVEKLLGYVAAELVGKSIEDLV 70 Query: 605 HITFGDNGPLMENIYSADTSRSAIEQDVVL--HCRSGGSYDVHYSITPLSTLDGSNIGSV 662 F + P++ + ++A + + + + G DV S++ + T +G + Sbjct: 71 PNRFKASHPVLRSEFTASPRARRMGNGMAVKARRKDGSECDVDVSLSRIETDEG--MFFA 128 Query: 663 LVIQDVTESRKMLRQLSYS 681 ++D++E ++ +L Sbjct: 129 SALRDISERKRKEEELRRQ 147 >UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q39R25_GEOMG Length = 905 Score = 761 bits (1965), Expect = 0.0, Method: Composition-based stats. Identities = 189/905 (20%), Positives = 342/905 (37%), Gaps = 53/905 (5%) Query: 209 MLYLPWPF-TFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSH 267 + YLP P + +LL+ + L V++ P ++ L+ Sbjct: 11 LRYLPSPKKQLLALLLIVFVIEL---------FLMVLLPRTADGGTPLAISLLDALLLVI 61 Query: 268 MPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQT 327 + L ++ + + +++ A G+ G+ L Sbjct: 62 LSAPIIWLSIVRPLRSVAFTASLHTD------------LLLDHIADGIISFDGAGRLLSL 109 Query: 328 NKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLIS--GEINTYSMEKRYYNRNG 385 N A Q GY E G + + KD + L+ E + + E +G Sbjct: 110 NPAAEQLFGYQSAEATGRSLGDILAIRSTGKDNPLLTPLVCCGEEHSRLTCEAEGIRSDG 169 Query: 386 DVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEW 445 A L++S V+ +F+ + D+ E + T + ++ E++ +A GI Sbjct: 170 SRFPAALSLSRVQMKG--VWHFLGIVRDVTESRETGERLRETNEKLDTLIQASPQGIVAV 227 Query: 446 ELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRD-SLQSRSPFKLE 504 + + W++ E++ V P +R + +R+ LQ + +E Sbjct: 228 DCGGKVTLWNRAAVEIFGWSAEEVLGKPYP---VAPAERAAEHRKLRELVLQGKRITDVE 284 Query: 505 FRITVKDGI-RHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDS 563 R KDG + A + + G ++ I D++ K+ + L L ++S Sbjct: 285 LRRRRKDGSPIDVSLSAAPICDGSGTPLGVITIISDISARKRNEQELV----LLKRAMES 340 Query: 564 IGEAVVCID---MAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYS 620 + D I ++NP E+++G+ +E + L D L + + + Sbjct: 341 SINGITITDATHPDNPIIYVNPAFERITGYGVDEVIDKNPR-FLRGDDRDQAELKKLVQA 399 Query: 621 ADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSY 680 R + + + G + I P+ DG + V+ D+TE R+ QL Y Sbjct: 400 FKEEREGC-FVLRNYRKDGSPFWNELFIAPVRDRDGVVTNYIGVMNDITEHRRYEEQLVY 458 Query: 681 SASHDALTHLANRASFEKQLRILLQ-TVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDAL 739 A+HD LT L NR + +L L ++F+DLD FK VND+ GH GD L Sbjct: 459 QATHDPLTGLPNRNLLQDRLGQALALEAFRRRNPICVMFLDLDNFKKVNDTLGHTVGDML 518 Query: 740 LRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGR 798 L+ +A+ + + LR D +ARLGGDE+ ++LP+ V +A ++I+ + G Sbjct: 519 LKAVANRLKNCLRGGDTVARLGGDEYIIVLPNVREVPDVITVAKKMINVFAA-PLLLMGN 577 Query: 799 VHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMS 858 V AS GI L + ++ AD A Y +K G+ Y + ER ++ Sbjct: 578 EIYVTASIGIALFPTDGETVDALLKNADAAMYHAKEQGKNNYQFYSAEMNIRVFERLSLE 637 Query: 859 LDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPA 917 R +K + ++ R R + +L W E ++ F + Sbjct: 638 T-SLHRAVKNQEFLLHYQPRVDLR--NGRICGVEALVRWNHPEMGLVSPAKFIPLAEETG 694 Query: 918 LSHALDRRVFHEFFQQ--AAKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPR 975 L + V Q A + + +++ LS L+ + E L + L P+ Sbjct: 695 LIVPMGEWVLRTACAQNKAWQDAGLPPLRMAVNLSARQFRQENLIAMVEEILMETGLAPQ 754 Query: 976 LLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGE 1031 L L + ++ AE +++L G + + G + LK L +D Sbjct: 755 WLELELTESLVMQEAEKSAAILRELTDRGIEVAIDDFGTGYSSLSYLKRFPIANLKIDQA 814 Query: 1032 LCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQ 1091 ++ + D L+ I A LGMKTIA V L +D L + + G + Sbjct: 815 FIRDMTRDPDDATLVKTIITMAHGLGMKTIAEGVELAEQIDFLCRHQCEEMQGYYFSRPI 874 Query: 1092 PLDLL 1096 + L Sbjct: 875 TAEEL 879 >UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Q1_9PROT Length = 1135 Score = 759 bits (1959), Expect = 0.0, Method: Composition-based stats. Identities = 177/880 (20%), Positives = 334/880 (37%), Gaps = 50/880 (5%) Query: 253 DPSLLATPRTYLMSHMPWLP--------FLLILLPANIMTMVMYAFRAE-RKHISESETH 303 P + T + W + +LL +++ M Y A+ E+E Sbjct: 269 YPFAVLTHIDRTRALQKWQAEAKTLLAVVIPVLLAISLLAMAFYRRLAQNEAQRREAERL 328 Query: 304 FR---NAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDL 360 R + SA + + + N A Q GYS E++ G + L+ + Sbjct: 329 QRINATVFDSSAEAIIITDLNANIISVNPAFTQITGYSPEDVLGKNPRILSSGQQSKGFY 388 Query: 361 QQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRT 420 +++ + + N + E ++NG + L++S R G +FI DI E K+ Sbjct: 389 RELWEALL-RDNFWQGELVNRHKNGSLYNIHLSISASRDGTGQLQHFIGVTTDITERKQH 447 Query: 421 EQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI--PPHIKPNWQVW-YE 477 E + E+ + GI + NI + + N W + Sbjct: 448 ESELRMESEKNMVLLRNASDGIHILDPDGNIIEASDSFCSMLGYQRNEMLGMNVCQWDAD 507 Query: 478 CVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGIN 537 P K+ RD ++ + E R KDG ++ L G+ L + Sbjct: 508 FSDP----RIVKLFRDQFTNKGRTQFETRHRRKDGTVIDVEISGYPLQLHGKPA-LFNSS 562 Query: 538 MDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALG 597 D+TE K++ + ++ T E ++ D I +N ++G++ EE +G Sbjct: 563 RDITERKKIE-----VEIQIAATAFEAQEGMLITDADRNILRVNRAFTDITGYSAEEVIG 617 Query: 598 VPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGS 657 + + + +++ + A + ++ ++G Y +IT + G Sbjct: 618 KNPRIL--SSGLHDSHFYAAMWNTLVATGAWKGEIWNKRKNGEVYPERLAITAVKDARGV 675 Query: 658 NIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALV 717 I V + D+T + ++ A D LT L NR +L+ L + + + AL+ Sbjct: 676 VINYVASLSDITLHKAAEDEIRSLAFFDPLTGLPNRRLLMDRLQQALVASSRSGKAGALL 735 Query: 718 FIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESA 777 F+DLD FK +ND+ GH GD LL+++A + + +R D +AR+GGDEF ++L D + ES Sbjct: 736 FLDLDNFKNLNDTLGHDIGDLLLQQVAQRLKNCVREGDTVARIGGDEFVVMLEDLSAESI 795 Query: 778 ------RFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYA 831 + +IIS +N + E S G TL D ++ QADIA Y Sbjct: 796 EAASQTEAVGWKIISTLNK-PYHLEKFEVHSTPSIGATLFDSRPQIIDDLFKQADIAMYQ 854 Query: 832 SKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWL 891 +K GR + ++PQ + R A+ D + + I+ + + R + Sbjct: 855 AKKAGRNTMRFFDPQMQDTLNTRTALEADLR-KSIERREFNLFYQIQVD---EMNRPVGA 910 Query: 892 ISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA---VASKGISISL 947 +L W + ++ F + L + V E Q ++ + +++ Sbjct: 911 EALIRWIHPKRGMVSPAEFIPLAEETDLILNIGLWVLQEACAQLKTWQNNPLTRNLVLAV 970 Query: 948 PLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRI 1003 +S + + +E + P L L + + ++ E + L+ G + Sbjct: 971 NVSAKQFRQSDFATQVRVFVEKYAIDPSKLKLELTESMLQENIEDTILIMNALKEIGVQF 1030 Query: 1004 VLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAG 1063 L G +K + L +D ++ + D+ ++ I A+ L + IA Sbjct: 1031 SLDDFGTGYSSLQYIKKLPLNQLKIDQSFVHDLDFDRDDKAIVRAIIAMAKSLQLDVIAE 1090 Query: 1064 PVVLPLVMDTLSGIGVDLIYGEVIADAQPL---DLLVNSS 1100 V L G G + + P+ D L+ + Sbjct: 1091 GVETQEQRQLLLNKGCTHFQGYLFSKPLPIREFDALLERA 1130 >UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IA0_DECAR Length = 925 Score = 758 bits (1958), Expect = 0.0, Method: Composition-based stats. Identities = 169/801 (21%), Positives = 329/801 (41%), Gaps = 34/801 (4%) Query: 314 GMA---LVGTEGQWLQTNKALCQFLGYSQEELRGLT---FQQLTWPEDLNKDLQQVEKLI 367 GMA L + + + + GY+ E+ G T ++++T P+D + +E I Sbjct: 105 GMAYRCLHDADWTMVFVSDGCQELSGYASSEILGKTGVSWEEITHPQDRGRVRACIEDAI 164 Query: 368 SGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQL 427 G ++++ R ++G V W + +R + IEDI+ + T + + Sbjct: 165 -GSGQRFAVQYRIVCKSGQVKWVIERGVAIRDELDESV-IEGFIEDISVRRTTLEALEAA 222 Query: 428 MERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIP--PHIKPNWQVWYECVL--PED 483 +R E GI++ + + + + +LY + + + P Sbjct: 223 EQRYRNIFEHASEGIFQSTRDGHYLAANPALAKLYGYDNAQALMTDLADIERRLYVQPNR 282 Query: 484 RQHAEKVIRDSLQSRSPFKLEFRITVKDGIR-HIRALANRVLNKEGEVERLLGINMDMTE 542 R+ +I ++ + E + +DG R I A+ V +GE G D++E Sbjct: 283 REEFLTLIE---KNGAILNFESEVYRRDGSRIWISENAHVVFGPQGEFICYEGTVQDISE 339 Query: 543 VKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLT 602 K+ L + + + + EA++ D + +I NP ++G+ ++ +G Sbjct: 340 RKRTEAHL----QLMAMVFSNSNEAIIVTDASNRIIATNPAFTCLTGYQPDDVIGKNPRI 395 Query: 603 VLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSV 662 + T + ++++ A + ++ ++G +Y SI+ + DG + Sbjct: 396 LSAGTTP--TEVFSDMWTCLHREGAWQGELWDRKKNGEAYPKWLSISLVRDEDGQIRNHI 453 Query: 663 LVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLD 722 D++E + ++ + A HD LT+LANR S ++L L + AL+ IDLD Sbjct: 454 GSFIDISELKATQERIRHLAHHDTLTNLANRFSLHEKLAQALAFCKRNRMQLALMLIDLD 513 Query: 723 RFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARFIA 781 RFK +ND+ GH AGD LL ++A + +R SD++ARLGGDEF + LP + A +A Sbjct: 514 RFKTINDTLGHQAGDELLVQVAKRLSHAVRESDIVARLGGDEFVIALPGIGSPADAAHLA 573 Query: 782 TRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVT 841 I ++ ++ +G+ R S GI + + + +++ AD+A Y +K GRG Sbjct: 574 DDITREISA-PYLIKGQELRTSPSIGICVYPGDGSEIGDLLKNADVAMYHAKANGRGNYQ 632 Query: 842 VYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCE- 900 + A +ER + D + I + ++ R + + +L W Sbjct: 633 FFTEDMNIATTERMCLESDLRL-AITRREFLLHYQPQLDLR--SGTIVGVEALIRWQHPT 689 Query: 901 GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAA--KAVASKGISISLPLSVAGLSSAT 958 ++ F + + A+ V E +Q + + +S+ LS T Sbjct: 690 RGLVSPADFIPIAEESGMIAAIGDWVLEEACRQLKVWQNRGITHLRMSINLSAGQFLDKT 749 Query: 959 LVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQI 1014 L + E L + L L L + + + ++ L +G + + G Sbjct: 750 LPARIHELLAANDLSADRLDLEVTESMSMASPDESISVMKTLSSSGLTLSIDDFGTGYSS 809 Query: 1015 FNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTL 1074 LK L +D +++ + D + + A +LG++ +A V + L Sbjct: 810 LAYLKLLPIHTLKIDRSFVKDIESDPNDADICDVTVLLAHKLGLEVVAEGVETEAQLKFL 869 Query: 1075 SGIGVDLIYGEVIADAQPLDL 1095 IG + + G +I+ P D Sbjct: 870 LSIGCEKVQGYLISKPLPADQ 890 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 53/278 (19%), Positives = 105/278 (37%), Gaps = 19/278 (6%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + R + + +E +RN E+++ G+ +G +L N AL + GY + Sbjct: 209 ISVRRTTLEALEAAEQRYRNIFEHASEGIFQSTRDGHYLAANPALAKLYGYDNAQALMTD 268 Query: 347 FQQL-----TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTD 401 + P + L +EK +G I + E Y R+G +W +V Sbjct: 269 LADIERRLYVQPNRREEFLTLIEK--NGAI--LNFESEVYRRDGSRIWISENAHVVFGPQ 324 Query: 402 GTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFEL 461 G + + ++DI+E KRTE Q + + I + I + + L Sbjct: 325 GEFICYEGTVQDISERKRTEAHLQLMA----MVFSNSNEAIIVTDASNRIIATNPAFTCL 380 Query: 462 YEIPPH--IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRAL 519 P I N ++ P + L ++ E K+G + + L Sbjct: 381 TGYQPDDVIGKNPRILSAGTTP---TEVFSDMWTCLHREGAWQGELWDRKKNGEAYPKWL 437 Query: 520 A-NRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKER 556 + + V +++G++ +G +D++E+K E + Sbjct: 438 SISLVRDEDGQIRNHIGSFIDISELKATQERIRHLAHH 475 >UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WTL1_METML Length = 976 Score = 749 bits (1935), Expect = 0.0, Method: Composition-based stats. Identities = 149/708 (21%), Positives = 289/708 (40%), Gaps = 30/708 (4%) Query: 410 QIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP-HI 468 LK + + R A E G G+W+W + + + KR E+ + Sbjct: 267 VARRTQALKENIEELKNSEFRWKFAIEGAGDGVWDWNIATDEAQYSKRWKEMLGYDENEL 326 Query: 469 KPNWQVWYECVLPEDRQHAEKVIRDSLQSRSP-FKLEFRITVKDGIRHIRALANRV--LN 525 P Q W + V +D + ++ ++D L+ ++ + +E+R+ KD + + Sbjct: 327 LPTNQEWADRVHHDDVAYVKQTMQDYLEGKTALYVVEYRLKCKDNRYKWILGRGMIVSRD 386 Query: 526 KEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAE 585 +G R++G + D+TE K++ + L E +V + I +N Sbjct: 387 DQGNPLRMIGTHTDITERKKIEQQLRIAATAFE-----SQEGIVVTNENFNILRVNQAFI 441 Query: 586 KMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVH 645 ++G+ EEA G + + +G NIY++ + +++ ++G Y H Sbjct: 442 DITGYEAEEATGKKPNILK--SGRQSGEFYRNIYTSLRETGSWSGEIINRRKNGEIYPEH 499 Query: 646 YSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQ 705 +IT + DG V + D++ ++ ++ A D LT+L NR F +L L Sbjct: 500 LTITAVKDADGQTTNYVGMFTDISVAKAASERIENLAFFDPLTNLPNRRLFSDRLTQALV 559 Query: 706 TVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEF 765 + ALVF+DLD FK++ND+ GH GD LL+++A + + +R D +ARLGGDEF Sbjct: 560 NSTRSGNYGALVFLDLDHFKSLNDTLGHDYGDMLLKQVALRLSNCVREGDSVARLGGDEF 619 Query: 766 GLLLPDCNVESA------RFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAA 819 LL+ + + I +I+ ++N + + + S GI+L + + + Sbjct: 620 VLLVENLSANDVEAAHQIEAIGDKILMSLNQ-PYQLQSHEYLSTPSIGISLFNGHQESSE 678 Query: 820 EVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVA 879 +++ ADIA Y +K GR + ++P + R + + + + I++ Q + Sbjct: 679 DLLKHADIAMYQAKKAGRNTLRFFDPLMQETINMRVDLERELK-KAIEQKQFELYYQVQM 737 Query: 880 SPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA- 937 + + +L W E II F + L + V ++ Q Sbjct: 738 N---SAGQPSGAEALIRWRHPERGIISPIQFIPVAEETGLITQIGEWVLNQACLQLQAWQ 794 Query: 938 --VASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE---- 991 ASK S+++ +S N + + + + L L + ++D+ E Sbjct: 795 LDQASKDFSLAINVSAKQFLQPDFANQVKNSIRSFHIDNTKLKLELTESMLIDNIEYVIH 854 Query: 992 SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQG 1051 ++ L G + L G LK L +D ++ + ++ ++ I Sbjct: 855 TMNTLGEIGIQFSLDDFGTGYSSLQYLKMLPLSQLKIDQSFVRDLATDNSNKTIVLTIIT 914 Query: 1052 HAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNS 1099 A LG+ IA V + L+ G G ++ ++ + Sbjct: 915 MAHSLGLNVIAEGVETDEQLQLLNAHGCGNYQGYYFSEPLSINEFNHQ 962 Score = 104 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 55/274 (20%), Positives = 99/274 (36%), Gaps = 14/274 (5%) Query: 283 MTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEEL 342 + A + + + SE ++ A+E + G+ Q +K + LGY + EL Sbjct: 267 VARRTQALKENIEELKNSEFRWKFAIEGAGDGVWDWNIATDEAQYSKRWKEMLGYDENEL 326 Query: 343 R--GLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLV-RH 399 + +D+ Q ++ + G+ Y +E R ++ W L +V R Sbjct: 327 LPTNQEWADRVHHDDVAYVKQTMQDYLEGKTALYVVEYRLKCKDNRYKWILGRGMIVSRD 386 Query: 400 TDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMF 459 G PL I DI E K+ EQ RI GI NI ++ Sbjct: 387 DQGNPLRMIGTHTDITERKKIEQQL-----RIAATAFESQEGIVVTNENFNILRVNQAFI 441 Query: 460 ELYEIPPHIKPNWQVWYECVLPEDRQ--HAEKVIRDSLQSRSPFKLEFRITVKDGIRHIR 517 ++ + +L RQ + I SL+ + E K+G + Sbjct: 442 DITGYEAEEATGKKP---NILKSGRQSGEFYRNIYTSLRETGSWSGEIINRRKNGEIYPE 498 Query: 518 ALA-NRVLNKEGEVERLLGINMDMTEVKQLNEAL 550 L V + +G+ +G+ D++ K +E + Sbjct: 499 HLTITAVKDADGQTTNYVGMFTDISVAKAASERI 532 Score = 80.3 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 54/144 (37%), Gaps = 2/144 (1%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 ERK I + A E S G+ + L+ N+A GY EE G L Sbjct: 402 TERKKIEQQLRIAATAFE-SQEGIVVTNENFNILRVNQAFIDITGYEAEEATGKKPNILK 460 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 + + + + E ++S E +NG++ L ++ V+ DG ++ Sbjct: 461 SGRQSGEFYRNIYTSLR-ETGSWSGEIINRRKNGEIYPEHLTITAVKDADGQTTNYVGMF 519 Query: 412 EDINELKRTEQVNQQLMERITLAN 435 DI+ K + + L L N Sbjct: 520 TDISVAKAASERIENLAFFDPLTN 543 >UniRef50_Q2BB47 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BB47_9BACI Length = 1106 Score = 749 bits (1934), Expect = 0.0, Method: Composition-based stats. Identities = 186/826 (22%), Positives = 356/826 (43%), Gaps = 22/826 (2%) Query: 277 LLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLG 336 + ++ + A ++ +S SE +R+ + + + G N +L + Sbjct: 128 TIGIIGISKDITAEENLKQKLSISEQMYRSLFDNHPDAVYSLDLNGDVTAFNDSLVRLFH 187 Query: 337 YSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSL 396 Y + + G++F+Q PE ++ + + G+ Y+M NR+G+ A + Sbjct: 188 YDPD-MHGISFRQFVAPESMSLVMCMFKLAAKGKPQNYNMTG--INRSGEKFDANITNIP 244 Query: 397 VRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDK 456 + TD +DI EL E+ Q+ ER+ LA + G W++ K + W + Sbjct: 245 I-ITDNQITGVFGIAKDITELAEKERKLQKAEERLNLAQKTANFGYWDYYFKEDSAYWSE 303 Query: 457 RMFELYEIP-PHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD-GIR 514 M+E++ + P++ + + + PED K SL+ ++P LE+RI KD +R Sbjct: 304 HMYEMFGVSKDEFIPSFDYYKDFIHPEDLAPFLKNYHASLEEKTPADLEYRIIRKDGQVR 363 Query: 515 HIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMA 574 + + +L+ +G ER +GI+ D+TE +++ + L + E+ ++ V +D A Sbjct: 364 RLHHQSTLILDGDGCPERAVGISRDVTEQREIEDRLAENTEQFKSFYNNSDVGVWSLDPA 423 Query: 575 MK-ITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVV 633 K + + + G+T++E P + I D ++ N + + + I Q Sbjct: 424 GKKVLICSNAILAIYGYTKKELYRDPRIWNRSIHPDDVQEVINN-QNKISEGNIIRQQYR 482 Query: 634 LHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANR 693 + R G V + P+ G I ++ D+T ++ Q+ + A HD +T L NR Sbjct: 483 IITRDGKLKWVSDHLIPIYDEKGRLIRLDGIVADITAQKQAEAQMEFLAYHDYMTGLPNR 542 Query: 694 ASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRS 753 F++ L L + ++ A++++DLDRFK +ND+ GH GD +L+E A + + +R Sbjct: 543 RLFDQTLNGLFE--GKNPEKFAIMYLDLDRFKHINDTLGHPIGDQVLKEAADRITASIRK 600 Query: 754 SDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLID 812 D +R+GGDEF ++ + ++E A +A +I + + EG + AS GI+L Sbjct: 601 GDFASRMGGDEFAIIARNVESIEDASRLAAKITGTIQK-PYEIEGYELFITASIGISLYP 659 Query: 813 DNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLM 872 +N E+ AD A Y +K G+ VY ++ + D + +K++Q Sbjct: 660 NNGSTPEELARNADAALYHAKQMGKSSHQVYNASMNIESFKKYCLERDMR-NALKDDQFY 718 Query: 873 MLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFF 931 + PR + +L W + I+ F + L + V Sbjct: 719 VEFQPKIEPR--THKLAGAEALLRWNHPDWGIVSPMEFIPVAEESGLIVEIGDWVIENVI 776 Query: 932 QQAAKAVAS--KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH 989 + + + IS+ +S L + + + + P+LL L + +++ + Sbjct: 777 AKMEEWQKGGLSLVPISINVSGQRFYKNNLAEMIGDLCQKHGISPKLLELELTESSLIHY 836 Query: 990 AESV-QKLRLAG---CRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEML 1045 ++ V Q+L G ++ L G L+ + L +D N+ NL D + Sbjct: 837 SDQVLQELEKLGQLKIKLSLDDFGTGFSSLTHLRKFRFNTLKIDKSFTKNIISNLEDATI 896 Query: 1046 ITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQ 1091 + + A L MK +A V +D L G D I G + + Sbjct: 897 TSSLIDMAHGLNMKVVAEGVEEFEQLDFLKKKGCDEIQGFLFSRPV 942 Score = 152 bits (385), Expect = 7e-35, Method: Composition-based stats. Identities = 63/376 (16%), Positives = 154/376 (40%), Gaps = 6/376 (1%) Query: 304 FRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQV 363 + + ++ ++ EGQ L+ N+A + G+S EE++ F EDL K Sbjct: 31 YESLFLNTSDLAYILDKEGQILKVNEAAVKATGFSAEEIQKRGFFPFVCKEDLPKAETSF 90 Query: 364 EKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQV 423 + ++ G T+ R R+G ++ L +V++ + + I +DI + +Q Sbjct: 91 QAVLQGSTQTHIF--RINRRDGGLI-LLNSVAIPIIQENQTIGIIGISKDITAEENLKQK 147 Query: 424 NQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPED 483 + + ++ +L ++ +++ + L+ P + + + V PE Sbjct: 148 LSISEQMYRSLFDNHPDAVYSLDLNGDVTAFNDSLVRLFHYDPDMHGI--SFRQFVAPES 205 Query: 484 RQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEV 543 + + + + + P + G + + N + + ++ + GI D+TE+ Sbjct: 206 MSLVMCMFKLAAKGK-PQNYNMTGINRSGEKFDANITNIPIITDNQITGVFGIAKDITEL 264 Query: 544 KQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTV 603 + L + +ERL++ + + + +M G +++E + Sbjct: 265 AEKERKLQKAEERLNLAQKTANFGYWDYYFKEDSAYWSEHMYEMFGVSKDEFIPSFDYYK 324 Query: 604 LHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVL 663 I D P ++N +++ ++ + + + + G +H+ T + DG +V Sbjct: 325 DFIHPEDLAPFLKNYHASLEEKTPADLEYRIIRKDGQVRRLHHQSTLILDGDGCPERAVG 384 Query: 664 VIQDVTESRKMLRQLS 679 + +DVTE R++ +L+ Sbjct: 385 ISRDVTEQREIEDRLA 400 Score = 58.7 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 63/184 (34%), Gaps = 31/184 (16%) Query: 552 QEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDN 611 + + + +D +I +N A K +G++ EE ++ Sbjct: 26 ENIHIYESLFLNTSDLAYILDKEGQILKVNEAAVKATGFSAEEIQKRGF---FPFVCKED 82 Query: 612 GPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTES 671 P E + A S ++ R GG ++ P+ + IG + + +D+T Sbjct: 83 LPKAETSFQAVLQGSTQTHIFRINRRDGGLILLNSVAIPI-IQENQTIGIIGISKDITAE 141 Query: 672 RKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDR----FKAV 727 + ++LS S R+ F+ + A+ +DL+ F Sbjct: 142 ENLKQKLSISEQM-------YRSLFD-------------NHPDAVYSLDLNGDVTAF--- 178 Query: 728 NDSA 731 NDS Sbjct: 179 NDSL 182 >UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4VY11_9CYAN Length = 1393 Score = 747 bits (1929), Expect = 0.0, Method: Composition-based stats. Identities = 180/814 (22%), Positives = 334/814 (41%), Gaps = 27/814 (3%) Query: 298 SESETHF---RNAMEYSAIGMALVGT---EGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 +SE + + A+ S G+ + + + N A GY+ +E+ G + Sbjct: 572 QQSEANLYLMQRAIAASNNGVIITDPNQPDNPVIYVNPAFESMTGYTAKEVIGHNCRFWQ 631 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 P+ + ++ I + + + + Y ++G W L VS V DG +F+ Sbjct: 632 EPDYNQAGVTKLATAIQEQRECHVILQNY-RKDGSTFWNELYVSPVFDGDGYLTHFVGIQ 690 Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSW-DKRMFELYEIP-PHIK 469 DI + K+ E+ +Q E++ + +W L+ F + + +Y P Sbjct: 691 TDITKRKQAEEALRQSEEKLDSILRSLDDVVWSASLENQQFIYLNPATERVYGRPVSDFV 750 Query: 470 PNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD-GIRHIRALANRVLNKEG 528 +W + P+DRQ E+ + S LE+R+ D +R +R A + + G Sbjct: 751 DCPSLWQFVIHPDDRQRVERASNRMMHQGSK-DLEYRVVRPDGEVRWLRDRARLIYDHRG 809 Query: 529 EVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMS 588 R+ GI DMT+ KQ AL + +E+ +T + + + + +N Sbjct: 810 IAIRMDGIATDMTKRKQAEAALLKSEEQFRLTFELAPIGMAMTSLEGQFLKVNQALCDAL 869 Query: 589 GWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSI 648 G+T +E L + + H T ++ S ++ + L +SG + + Sbjct: 870 GYTAQELLALTFTEISHPT-ERALHFTQHQSLLQGELSHLQTERRLISKSGRIVNAILKV 928 Query: 649 TPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTV- 707 + G + + + D+++ ++M QL + A HD LT L NRA F +L L+ Sbjct: 929 VLVRDAQGQPLHYISQVVDISDRKRMEEQLLHDAFHDVLTGLPNRALFMDRLEYALRRAG 988 Query: 708 NSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGL 767 A++ +DLDRFK +NDS GH GD LL +A + LR SD LARLGGDEF + Sbjct: 989 QRWDYLCAVIVLDLDRFKVINDSLGHLVGDRLLSAIAERLQGCLRPSDTLARLGGDEFTI 1048 Query: 768 LLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQAD 826 LL D N +A IA I + + F +G AS GI L H+A +++ AD Sbjct: 1049 LLDDIPNTAAATDIAKSIHQTL-ESSFNLDGYEVFATASIGIALSGMGYHRAEDLLRDAD 1107 Query: 827 IACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEA 886 A + +K G +++ + + + + +W I+ +L + + S + Sbjct: 1108 TAMHRAKLQGTACYVMFDTAMSGRALAQLRLETELRW-AIERQELEVYYQPIIS--LGTG 1164 Query: 887 RNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS----K 941 + +L W E +I F + L + + V Q + Sbjct: 1165 KITGFEALVRWQHPEQGMISPGAFIPLAEETGLIIPIGQWVLRTSCYQLRQWQQQFPHYP 1224 Query: 942 GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLR 997 +++S+ LS S L+ + + ++ + + P L L I I++H++S +++L+ Sbjct: 1225 PLTMSVNLSGKQFSQTNLIEQIAQIIQETEVNPSTLKLEITESGIMEHSDSASALLERLK 1284 Query: 998 LAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLG 1057 ++ + G + L D L +D + + + ++ I A LG Sbjct: 1285 ALNIQLYIDDFGTGYSSLSRLHQFPIDALKIDRSFVSRMGDAGENGEIVQAIVTLAHNLG 1344 Query: 1058 MKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQ 1091 M +A + + + L G + G + Sbjct: 1345 MDVVAEGIETNMQLAQLRGRRCEYGQGYFFSKPL 1378 Score = 136 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 59/183 (32%), Positives = 96/183 (52%), Gaps = 3/183 (1%) Query: 276 ILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFL 335 I + + + M + + +SE FR E + IGMA+ EGQ+L+ N+ALC L Sbjct: 810 IAIRMDGIATDMTKRKQAEAALLKSEEQFRLTFELAPIGMAMTSLEGQFLKVNQALCDAL 869 Query: 336 GYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVS 395 GY+ +EL LTF +++ P + Q + L+ GE++ E+R +++G +V A+L V Sbjct: 870 GYTAQELLALTFTEISHPTERALHFTQHQSLLQGELSHLQTERRLISKSGRIVNAILKVV 929 Query: 396 LVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLA---NEAGGIGIWEWELKPNIF 452 LVR G PL++I+Q+ DI++ KR E+ L N A + E+ L+ Sbjct: 930 LVRDAQGQPLHYISQVVDISDRKRMEEQLLHDAFHDVLTGLPNRALFMDRLEYALRRAGQ 989 Query: 453 SWD 455 WD Sbjct: 990 RWD 992 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 58/450 (12%), Positives = 138/450 (30%), Gaps = 73/450 (16%) Query: 297 ISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLG-YSQEELRGLTFQQLTWPED 355 + +SE +R +E S +AL +G + N + LG S +L G + + Sbjct: 265 LKDSEACYRTLVEQSPNAIAL-EHQGTLVYINPRGVKLLGTISHNQLIGKPWSDFNPKDQ 323 Query: 356 LNKDLQQVEKLISGE-INTYSMEKR------------------YYNRNGDVVWALL-AVS 395 N+ ++ ++I E +S KR +G ++ + + Sbjct: 324 GNQRDREDHQVIGSEYTEKFSDHKRRSNPPHALTLPTKFVTEQIVQLDGQIIDVEIARLP 383 Query: 396 LVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIG-------------- 441 + I + + + +V + I ++ G Sbjct: 384 AIYQGQRATQLVIRDLTHREQPDQELRVRARQQATIAKLSQRALSGLDLNTLMDEAVSTI 443 Query: 442 ----------IWEWELKPNIF------SWDKRM--FELYEIPPHIKPNWQVWYECVLPED 483 + E N+F W + + L + + + + + + Sbjct: 444 AQTLEVEYCKVLELLPNGNVFLLKAGVGWSPGLVGYALVGANRNSQAGYNLISQ-----E 498 Query: 484 RQHAEKVIRDSLQSRSPFKLEFRITV---------KDGIRHIRALANRVLNKEGEVERLL 534 E + D+ S P R+ + + A + L Sbjct: 499 PVVVEDLPIDTRFSGPPLLYNHRVVSGVSVVIPGQEQPFGVLGAHTTSQRRFSEDDIHFL 558 Query: 535 GINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCID---MAMKITFMNPVAEKMSGWT 591 ++ + ++ + + + V+ D + ++NP E M+G+T Sbjct: 559 QAVANVLALAIGHQQSEANLYLMQRAIAASNNGVIITDPNQPDNPVIYVNPAFESMTGYT 618 Query: 592 QEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPL 651 +E +G + N + + +A + + + + G ++ ++P+ Sbjct: 619 AKEVIGHNCRFWQEPDY--NQAGVTKLATAIQEQRECHVILQNYRKDGSTFWNELYVSPV 676 Query: 652 STLDGSNIGSVLVIQDVTESRKMLRQLSYS 681 DG V + D+T+ ++ L S Sbjct: 677 FDGDGYLTHFVGIQTDITKRKQAEEALRQS 706 Score = 59.1 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 45/311 (14%), Positives = 104/311 (33%), Gaps = 39/311 (12%) Query: 294 RKHISESETHFRNAMEYSAIGMALVG-TEGQWLQTNKALCQFLGYSQEELRGLTFQQLT- 351 + + E FR + + +A+ ++G + N G + EL G + Sbjct: 132 NAELQQQEEQFRAITQAFPVPVAIARVSDGTIVYGNSHANVLFGVATSELVGNSMPDFYE 191 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 P D + L ++++ + + E + NG +W +++ ++ + ++ Sbjct: 192 NPADWQRLLARLDQ----KGVVQNEELCVHTINGTPLWVTVSMQVLTLNQEKAI--LSVF 245 Query: 412 EDINE-------LKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI 464 DI++ ++TE V + E I E + + + R +L Sbjct: 246 HDISDTYQQLTQYQQTEAVLKDSEACYRTLVEQSPNAI-ALEHQGTLVYINPRGVKLLGT 304 Query: 465 PPHIKPNWQVWYECVLPE-----DR--------QHAEKVIRDSLQSRSPFKL-------- 503 H + + W + + DR ++ EK +S P L Sbjct: 305 ISHNQLIGKPWSDFNPKDQGNQRDREDHQVIGSEYTEKFSDHKRRSNPPHALTLPTKFVT 364 Query: 504 EFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDS 563 E + + I + + + +L + D+T +Q ++ L + Sbjct: 365 EQIVQLDGQIIDVEIARLPAIYQGQRATQL--VIRDLTHREQPDQELRVRARQQATIAKL 422 Query: 564 IGEAVVCIDMA 574 A+ +D+ Sbjct: 423 SQRALSGLDLN 433 Score = 53.0 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 97/312 (31%), Gaps = 35/312 (11%) Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFE-LYEIPPHIKP 470 ++I T QQ E+ +A + + + + L+ + Sbjct: 123 QEIANCLHTNAELQQQEEQFRAITQAFPVPVAIARVSDGTIVYGNSHANVLFGVATSELV 182 Query: 471 NWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEV 530 + P D Q + Q E + +G ++ +VL E Sbjct: 183 GNSMPDFYENPADWQRLLARLD---QKGVVQNEELCVHTINGTPLWVTVSMQVLTLNQE- 238 Query: 531 ERLLGINMDMTEVKQLNEALFQEKERL-------HITLDSIGEAVVCIDMAMKITFMNPV 583 + +L + D+++ Q Q + L ++ A+ ++ + ++NP Sbjct: 239 KAILSVFHDISDTYQQLTQYQQTEAVLKDSEACYRTLVEQSPNAI-ALEHQGTLVYINPR 297 Query: 584 AEKMSG-WTQEEALGVPLLTV---------LHITFGDNGPLMENIYSADTSRSAIEQDVV 633 K+ G + + +G P G +S RS + Sbjct: 298 GVKLLGTISHNQLIGKPWSDFNPKDQGNQRDREDHQVIGSEYTEKFSDHKRRSNPPHALT 357 Query: 634 LHCR---------SGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASH 684 L + G DV I L + + LVI+D+T + ++L A Sbjct: 358 LPTKFVTEQIVQLDGQIIDVE--IARLPAIYQGQRATQLVIRDLTHREQPDQELRVRARQ 415 Query: 685 DA-LTHLANRAS 695 A + L+ RA Sbjct: 416 QATIAKLSQRAL 427 >UniRef50_C9PLR8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PLR8_VIBFU Length = 1097 Score = 747 bits (1928), Expect = 0.0, Method: Composition-based stats. Identities = 175/834 (20%), Positives = 348/834 (41%), Gaps = 30/834 (3%) Query: 286 VMYAFRAERKHIS-ESE-THFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELR 343 V+ R + +SE + G+ + +G+ + N+A GYS EE++ Sbjct: 269 VLVVIRNTSAQVEAQSEIRRLSEVARQTTNGVVITDVKGRVIWINEAFSFLTGYSIEEMQ 328 Query: 344 GLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGT 403 G +L ED + + + + N ++++ Y++ + W +A + + G+ Sbjct: 329 GKKPGELLQGEDTDPATVAIMRDALAQQNGFNVDVVNYSKAQNSYWVRIACNPLFSESGS 388 Query: 404 PLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYE 463 +IA DI + K+ E++ + + +A IG W + ++ + + L Sbjct: 389 LSGYIAIETDITKEKQDEELIRNSQNLLKAVIDANNIGTWHFNIQTGELIINDKWAALLG 448 Query: 464 I--PPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSP-FKLEFRITVKDGIRHIRALA 520 + N W P+D + ++ + P ++ R+ K+G Sbjct: 449 YTLSELLPANRYTWERLTHPDDLAYCTTILEKHVSGLIPIYEANLRMKHKNGEWIWINTR 508 Query: 521 NRV--LNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKIT 578 R+ +G+ LLG + D+ + +AL + ++ ++ + + ++ ID KI Sbjct: 509 GRISSRTYDGKALWLLGTHFDINDQIIAEKALSDKSRQMEAVVEGLLDGIITIDGRGKIL 568 Query: 579 FMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGP--LMENIYSADTSRSAIEQDVVLHC 636 N A+++ G+T++E LG + ++ ++ L I + + +++ Sbjct: 569 TFNQAAQEIFGYTEDETLGKNISMLMGSPHREHHDSYLSNYIERGVSEITGRIRELEALR 628 Query: 637 RSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASF 696 + G + + I + + + V++D+TE ++ ++ A +D LT L NR Sbjct: 629 KDGSMFPIELGIVEVQMA--GEVNFIGVVRDITERKQRENEIHQLAFYDPLTLLPNRRLL 686 Query: 697 EKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDV 756 +L + T AL F+DLD FK +NDSAGH GD LL ++A +++ +R D Sbjct: 687 LDRLTEAINHSVRTRNFSALFFLDLDNFKNLNDSAGHNKGDLLLGQVAERLVNSVRQGDT 746 Query: 757 LARLGGDEFGLLLPDCNVE------SARFIATRIISAVNDYHFIWEGRVHRVGASAGITL 810 +ARLGGDEF ++ D + E A +A +I+S + + +G + AS G+TL Sbjct: 747 VARLGGDEFVIIASDLSHEPTLAANQAERLAQKIVSNLTR-EYNLDGLTYNSSASIGVTL 805 Query: 811 IDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQ 870 + N +++ QAD+A Y +K GR V ++PQ + S RA++ D + I+ Q Sbjct: 806 FNSENLPKEDLLKQADMAMYKAKYAGRNGVQFFDPQMQVSVSSRASIVSD-LYSAIQSQQ 864 Query: 871 LMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHE 929 ++ + + + + L W E ++ F + L + V E Sbjct: 865 FVLFYQKQVN---HLKQCIGVEVLLRWIHPEKGMVSPLQFIPLAEETGLIVPIGEWVLEE 921 Query: 930 FFQQAAKA---VASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAI 986 AK + +SI++ +SV S V +L L+ S P+LL L I + Sbjct: 922 ACATLAKWSLESEKQHLSIAVNISVVQFSKDNFVQTVLNALKTSGANPQLLKLEITETLL 981 Query: 987 LDHA----ESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMD 1042 ++ +++L+ G + G + LK + L +D ++ + D Sbjct: 982 ANNIPDVKAKMKELQQHGVTFSIDDFGTGYSSLSYLKQLPINQLKIDQGFVRDIINSSND 1041 Query: 1043 EMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 + + A + ++ IA V L +G G + ++ L Sbjct: 1042 RAIAQAVITLADSIELQVIAEGVETEAQRALLQSMGCHTYQGYLYGKPCRIEEL 1095 >UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ79_9PROT Length = 923 Score = 746 bits (1927), Expect = 0.0, Method: Composition-based stats. Identities = 158/701 (22%), Positives = 291/701 (41%), Gaps = 18/701 (2%) Query: 405 LYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI 464 L ++ + +R+E + + + A GIG W ++ N W + ++ + Sbjct: 225 LTALSVAVLNAQHRRSEHALKLSEDNLNRAQSIVGIGSWHLDIVNNCLQWSDETYHIFGV 284 Query: 465 PPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVL 524 N++V+ E V +DR + + +L R P+ +E RI V IR +R AN Sbjct: 285 AEGTPLNYEVFLEHVHADDRDLVNRTWQQALL-RQPYDIEHRILVNGEIRWVREKANLDF 343 Query: 525 NKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVA 584 + G +G D+T KQ L DS GEA++ D +++ +N Sbjct: 344 DAHGNAVYAIGTVRDITRYKQEEATL----RLAARVFDSSGEAILITDENVRVVAVNHSF 399 Query: 585 EKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDV 644 MSG+ EE +G + + + ++ + ++ +SG Y Sbjct: 400 VAMSGYRSEEVMGKNPRML--SSGRHDAEFYRAMWDDINQHGYWQGEIWDKHKSGRIYPK 457 Query: 645 HYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILL 704 SIT + G + + + +D TE + + + + A +D LT L NR +L ++ Sbjct: 458 WMSITAVRDEHGKVVNYISIARDTTEQTEAEKNIHFLAYYDVLTGLPNRTLLRDRLGQMI 517 Query: 705 QTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDE 764 + + +L+F+DLDRFK +NDS GH+ GD LL+ +A + +R D +ARLGGDE Sbjct: 518 AVAHRDKHQFSLIFLDLDRFKYINDSMGHSVGDRLLQSVALRIQDCVREGDTVARLGGDE 577 Query: 765 FGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQ 824 F +LL + +A +A +++ A+ + +G+V AS GI++ D A ++ Sbjct: 578 FIVLLREAGESAASVVAQKLLIALA-TPYDLDGQVISTQASIGISIYPDQAQDADTLIKN 636 Query: 825 ADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIP 884 AD+A Y +K GR + P+ +M D + ++ +L + A + Sbjct: 637 ADMAMYRAKEEGRNNFQFFVPEMNFRVDLLFSMEKDLRL-ALERGELFLQYQPQAD--LA 693 Query: 885 EARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS--K 941 + +L W + F + A+ V Q A+ + Sbjct: 694 SGTLSGVEALIRWDHPVKGQVSPAEFIPVAEETGQIVAIGEWVLRTACSQMAEWRKTGMH 753 Query: 942 GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLR 997 ++I++ LS+ L L + L + L R L L I ++ ++ + +++ Sbjct: 754 DLTIAVNLSIRQLRQPDLAELIKSVLLETGLDARHLELEITEGIMMGDNQAAFRFLSEMQ 813 Query: 998 LAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLG 1057 G ++ + G N LK + L +D +++ + D +I I RL Sbjct: 814 DLGVQLSIDDFGTGFSSLNYLKQMPVNKLKIDQSFIRDIETDEGDAAIIRSIISLGHRLN 873 Query: 1058 MKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 ++ IA V +D L G D I G + + + Sbjct: 874 LRVIAEGVETQEQLDFLRIRGCDEIQGYFYSRPLLAEDFMR 914 Score = 151 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 81/506 (16%), Positives = 163/506 (32%), Gaps = 25/506 (4%) Query: 57 FYRHAGRMWPGIALSCSLGNIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYN 116 R++P I + N+ + N +EA++G LLR + + Sbjct: 1 MLLFGWRLFPAIIIGEFFANLGTELTPLGA----FGLACGNALEALLGYYLLRHRVSFNE 56 Query: 117 PLQNLADWLRLALGSAIVPPLLGGVLVVLLTPGD------DPLRAFLIWVLSESIGALAL 170 L + D L + A+ PL+ + D + W + +++G Sbjct: 57 RLSTIRDVGLLFVFGALASPLVAALNGAWWIKLSTGESWQDYIHTVQYWWMGDALGIALF 116 Query: 171 VPLGLLFKPHYLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPW---PFTFIIVLLMWSA 227 L + + R+ +L + L W+ L LP F LL+W A Sbjct: 117 TTTILAWTRGDSIVWSYERV-RRGVLAAVVLLLTCWILFLDLPGRLLEFGLFFPLLIWIA 175 Query: 228 VRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVM 287 + L + L + + L + + + WL LL L A + ++ Sbjct: 176 LNFDLRCVSGALLLIFLSSILGLLSLGDLRGS-SLDTLVNFVWLYNLLFGLTALSVAVLN 234 Query: 288 YAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRG-LT 346 R + SE + A IG + LQ + G ++ Sbjct: 235 AQHRRSEHALKLSEDNLNRAQSIVGIGSWHLDIVNNCLQWSDETYHIFGVAEGTPLNYEV 294 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 F + +D + + ++ + Y +E R NG++ W +L G +Y Sbjct: 295 FLEHVHADDRDLVNRTWQQAL--LRQPYDIEHRIL-VNGEIRWVREKANLDFDAHGNAVY 351 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP 466 I + DI K+ E + ++ G I + + + + + Sbjct: 352 AIGTVRDITRYKQEEATLRLAAR----VFDSSGEAILITDENVRVVAVNHSFVAMSGYRS 407 Query: 467 HIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA-NRVLN 525 D + + + D + ++ E K G + + ++ V + Sbjct: 408 EEVMGKNPRMLSSGRHDAE-FYRAMWDDINQHGYWQGEIWDKHKSGRIYPKWMSITAVRD 466 Query: 526 KEGEVERLLGINMDMTEVKQLNEALF 551 + G+V + I D TE + + + Sbjct: 467 EHGKVVNYISIARDTTEQTEAEKNIH 492 >UniRef50_B8GTY7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GTY7_THISH Length = 808 Score = 746 bits (1927), Expect = 0.0, Method: Composition-based stats. Identities = 237/805 (29%), Positives = 381/805 (47%), Gaps = 30/805 (3%) Query: 303 HFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRG-LTFQQLTWPEDLNKDLQ 361 FR E + M L+ G ++ N++ C LGYS EEL G L DLN + Sbjct: 9 RFRLIFEQALDPMVLIDRHGGIVEANRSACASLGYSHEELVGGLHVTDF----DLNATRE 64 Query: 362 QVEKLISGEINTY--SMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKR 419 V ++ S + Y ++G A + ++ VR G A DI+E Sbjct: 65 DVGRVHGNPERHLPASFQSTYRRKDGSTFPAEVHINAVRV--GEQAQVFATFLDISERLA 122 Query: 420 TEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI-PPHIKPNWQVWYEC 478 E+ ++ ++ A + + ++ + N + + E + P + Sbjct: 123 AERTLREREHQLRTAITSAPMVLFSLDRHGNFMLSEGKGLEGLGLVPGQAVGMNALEMYG 182 Query: 479 VLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINM 538 PE + +R +L S P +LE R+ + + H V ++ +LG++ Sbjct: 183 AYPE----VAEGLRRAL-SGEPVQLESRVEGRCFLHHW----QPVPDEAAGGWGVLGVSY 233 Query: 539 DMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGV 598 D+T +AL E++RL TL+SI + V+ D+A ++ +MNPVAE+++G+T +A G Sbjct: 234 DITAQCLAEQALSGERDRLFTTLESIADGVITADVAGRVAYMNPVAEQLTGFTLNQARGR 293 Query: 599 PLLTVLHITFGDNGPLMENIYSADTSRS---AIEQDVVLHCRSGGSYDVHYSITPLSTLD 655 P+ +L + ++G L+ + + ++ L G SY V + +PL + Sbjct: 294 PMEEILRVEDLESGELLPDPVERCFNGGSPVVFSEESRLRRPDGESYAVRLTASPLRDGE 353 Query: 656 GSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHA 715 G+VLV+ D + M RQLS+ A HDALT L NR FE ++R L++ + + HA Sbjct: 354 DGISGAVLVLHDFSMLWDMARQLSHQARHDALTGLINRREFEDRVREALESARRSSRSHA 413 Query: 716 LVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE 775 L +IDLD+FK VND+ GH AGD LLR+LA+ + +R +D LARLGGDEFGLLL +C ++ Sbjct: 414 LCYIDLDQFKVVNDTCGHVAGDELLRQLAAALPRHIRDTDTLARLGGDEFGLLLENCPLD 473 Query: 776 SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNG 835 A I ++++ V + F+W+GR VG S G+ ID + +EV+S+AD ACY +K Sbjct: 474 RALSICHQLLAEVAELRFMWQGRRFDVGMSIGLVAIDGASASLSEVLSEADSACYVAKEQ 533 Query: 836 GRGRVTVYEPQQAAAHSERAAMSLDEQWR-MIKENQLMMLAHGVASPRIPEARNLWLISL 894 GR RV V P A + M + R ++E + + + P E + I L Sbjct: 534 GRNRVYVSRPGDQALKTRFGEMEWLGRIREAMEEERFELYCQPI-RPISGEGVPHFEILL 592 Query: 895 KLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA--VASKGISISLPLSVA 952 +L + +G +++ F + L +DR V F A + + + + LS Sbjct: 593 RLKAEDGSLVEPGAFIPAAERYNLMPQVDRHVIRSVFAMLADSDFALKQHAIVGINLSGQ 652 Query: 953 GLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH----AESVQKLRLAGCRIVLSQV 1008 L L++ + E L LP I A + + A +++LR GC L Sbjct: 653 SLGQEDLLDFVTEALHYYGLPAHRFCFEITETAAIANLSSAAGFIRELRDMGCAFALDDF 712 Query: 1009 GRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLP 1068 G L FN LK DYL +DG +V + +D ++ I + LG+KTIA V Sbjct: 713 GSGLSSFNYLKHMPVDYLKIDGSFVQDVLTDPVDAAMVGAIHRIGRVLGVKTIAEFVESE 772 Query: 1069 LVMDTLSGIGVDLIYGEVIADAQPL 1093 V++ L IGVD G I +P Sbjct: 773 AVLEHLREIGVDYAQGYGIGRPKPF 797 Score = 63.0 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 52/153 (33%), Gaps = 5/153 (3%) Query: 286 VMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGL 345 + AE+ E + F +E A G+ G+ N Q G++ + RG Sbjct: 235 ITAQCLAEQALSGERDRLF-TTLESIADGVITADVAGRVAYMNPVAEQLTGFTLNQARGR 293 Query: 346 TFQQLTWPEDLNKDL---QQVEKLIS-GEINTYSMEKRYYNRNGDVVWALLAVSLVRHTD 401 +++ EDL VE+ + G +S E R +G+ L S +R + Sbjct: 294 PMEEILRVEDLESGELLPDPVERCFNGGSPVVFSEESRLRRPDGESYAVRLTASPLRDGE 353 Query: 402 GTPLYFIAQIEDINELKRTEQVNQQLMERITLA 434 + + D + L + L Sbjct: 354 DGISGAVLVLHDFSMLWDMARQLSHQARHDALT 386 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 89/273 (32%), Gaps = 20/273 (7%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQL- 350 A + + E E R A+ + + + + G ++ + + LG + G+ ++ Sbjct: 122 AAERTLREREHQLRTAITSAPMVLFSLDRHGNFMLSEGKGLEGLGLVPGQAVGMNALEMY 181 Query: 351 -TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIA 409 +PE + + + +SGE +E R G V + Sbjct: 182 GAYPE----VAEGLRRALSGE--PVQLESRV---EGRCFLHHW--QPVPDEAAGGWGVLG 230 Query: 410 QIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIK 469 DI EQ +R+ E+ G+ ++ + + +L + Sbjct: 231 VSYDITAQCLAEQALSGERDRLFTTLESIADGVITADVAGRVAYMNPVAEQLTGFTLNQA 290 Query: 470 PNWQVWYECVLPEDRQHAE---KVIRDSLQSRSP--FKLEFRITVKD-GIRHIRALANRV 523 + E + ED + E + SP F E R+ D +R A+ + Sbjct: 291 RG-RPMEEILRVEDLESGELLPDPVERCFNGGSPVVFSEESRLRRPDGESYAVRLTASPL 349 Query: 524 LNKEGEVERLLGINMDMTEVKQLNEALFQEKER 556 + E + + + D + + + L + Sbjct: 350 RDGEDGISGAVLVLHDFSMLWDMARQLSHQARH 382 >UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1R5_9NEIS Length = 1086 Score = 745 bits (1923), Expect = 0.0, Method: Composition-based stats. Identities = 217/1064 (20%), Positives = 409/1064 (38%), Gaps = 43/1064 (4%) Query: 44 APLWFPTSIMMVAFYRHAGR-MWPGIALSCSLGNIAASILLFSTSSLNMTWTTINIVEAV 102 + P + ++ RH R +W L+ L + A L +L++ V Sbjct: 34 PASFIPHGLFLLWAVRHPARSVWLWPLLAWGLASQWAGPLWAGGLALSLYL--------V 85 Query: 103 VGAVLLRKLLPWYNPLQNLADWLRLALGSAIVPPLLGGVLVVLLTPGDDPLRAFLIWVLS 162 GA L + L +L+ LRL + P +L+ + + +L Sbjct: 86 AGAARLAGIHHARLTLNSLSSLLRLLSSLLLAPAAAAALLLWGVQAFSGVGVPLVQALLQ 145 Query: 163 ESIGALALVPLGLLFKPH-YLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIV 221 ALALV R R LL +L+TLA+ + + + L + Sbjct: 146 CGALALALVLCVPAAFAGVEYSRRRYLELLLIALVTLALWVAVFVAGHVSLVPIHLLLYP 205 Query: 222 LLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPAN 281 L+W+A R A L+ L +++ + + + P + L ++L A Sbjct: 206 CLLWAACRAGIGGATLLGLLILVLATFLDGPSFQPVPLP------ANGIVLNLALVLSAQ 259 Query: 282 IMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEE 341 ++ A + + +S F + S M+L EG++L N+A + LG + E Sbjct: 260 LVATQSEAAARRIRQLQDSLARFEAWLRNSPNVMSLKDLEGRYLLVNRAYSRALGKAPAE 319 Query: 342 LRGLTFQQLTWPEDLNKDLQQVEKLISG-EINTYSMEKRYYNRNGDVVWALLAVSLVRHT 400 L G PE+ +Q +++S E Y +G L+ + Sbjct: 320 LIGKKSADFLPPEEARATAEQDRQVLSALESRQYEQTLTL---DGLPGDFLVTKFPLFDA 376 Query: 401 DGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFE 460 DG P DI + KR Q Q+ R E +GI+ + + + ++ E Sbjct: 377 DGLPAGIGCIATDITQNKRERQAKQEAENRYHALIEQSLVGIYILQ-DECLAYVNDKLAE 435 Query: 461 LYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSL-QSRSPFKLEFRITVKDGIRHIRAL 519 + P ++ E+RQ + I L ++ S R+ KDG + Sbjct: 436 MLGYPGEELQGERIETVLAH-EERQRLRQQITQRLSENISIMHFSARLVRKDGQLLDVEI 494 Query: 520 ANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITF 579 +R+ G ++G+ +D+++ Q + ++ ++ E ++ +I Sbjct: 495 HSRLFEYRGR-SAIIGVVVDISDRVQADA----NQKLASKVFENAAEGILITGADYRIIA 549 Query: 580 MNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSG 639 +N +++G+ E +G + F DN + + +++ RS Sbjct: 550 VNQAFTRITGYPPELVIGR-----VSRIFRDNTSWSVAMLDGLARHGHWQGEMLDRRRSH 604 Query: 640 GSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQ 699 Y SI+ + G+ V V D+T ++ +L + A+HD LT L NR+ Sbjct: 605 EWYPAELSISAVRDDAGAITNYVGVFADITVRKQAEERLQFLANHDPLTRLPNRSWLIAC 664 Query: 700 LRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLAR 759 L +Q + S+ Q+ A++F+DLDRFK +NDS GH GD LLRE AS + ++ +AR Sbjct: 665 LEDRIQQIASSGQQVAVMFLDLDRFKLINDSFGHQTGDELLRETASRLEQVVGGRGQIAR 724 Query: 760 LGGDEFGLLLPD-CNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQA 818 LGGDEF LL+ + + +A I++ + EG+ V S GI++ + A Sbjct: 725 LGGDEFTLLVSHFASQATLSTLAEDILAVLAQ-PLWLEGQELIVTGSLGISVYPHDGSDA 783 Query: 819 AEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGV 878 ++ AD+A Y +K G+ + + A ER + + + ++ + + + Sbjct: 784 RTLLKNADVAMYRAKEAGKNTYQFFAAEMNAQAIERLQLERGLR-QALERGEFELHFQPI 842 Query: 879 ASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA- 937 + L + L+ E ++ F + L + V + +Q A+ Sbjct: 843 VAAATYRLEAL-EVLLRWRHPELGLVSPVRFIPLAEETGLIRPIGDWVIRQACRQLAEWD 901 Query: 938 -VASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES---- 992 + +++ LS L+ + L + + L L + ++ + Sbjct: 902 CLGLHVPRLAINLSARQFEQQGLIMQVAGALAEAGIAAGRLELEMTESMVMQNPSEAVSL 961 Query: 993 VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGH 1052 + +L+ G R+ + G + LK D L +D + G+ + + I Sbjct: 962 LGELKALGVRLSIDDFGTGYSSLSYLKRFPLDTLKIDRSFIEGLPGDGDNAAIAEAILAM 1021 Query: 1053 AQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 A++L +A V L G L+ G + + P L Sbjct: 1022 ARKLSFSVVAEGVETEAQAAFLCAKGCQLLQGYLFSRPLPAAEL 1065 >UniRef50_Q2SFI2 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFI2_HAHCH Length = 913 Score = 744 bits (1922), Expect = 0.0, Method: Composition-based stats. Identities = 185/879 (21%), Positives = 348/879 (39%), Gaps = 29/879 (3%) Query: 232 RMEAFLIFLTTVMMVSLMMAADPSLLAT------PRTYLMSHMPWLPFLLILLPANIMTM 285 R L ++ ++ + AD L+ T L S M ++ ++L ++ Sbjct: 15 RRLLVFSLLGAGLLSTVFLWADYQLMETLPAAQKAELSLQSAMLYILIACVVLIGGVVAW 74 Query: 286 VMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRG- 344 V+ A A K + ES + A + + +G + + + + + + LG S + + Sbjct: 75 VLTANEARNKALRESRNNLDKAQQIARLGNWVWDLKRNEVYWSDQVYRNLGLSLHDNKAS 134 Query: 345 -LTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGT 403 F + P+D + ++ V++ + + Y +E R +G+ A ++ G Sbjct: 135 YEKFLECVHPDDRARIVKLVDEALENK-QVYGIEHRVIWPDGEERIVCGAGEVIFDVQGN 193 Query: 404 PLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYE 463 P+ I+DI E KR E + I G + + I ++ Sbjct: 194 PVQMHGTIQDITERKRDENRKNEYAHLIYDLYNNAPCGYHSLDPRGVIVDINETALRWLG 253 Query: 464 IPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRH-IRALANR 522 ++ + + + Q + + + LE I KDG + + Sbjct: 254 YSRSELVGKVMFCDLLSEDCVQLCWDKLGQLKKGGALSNLELNIRCKDGRLFCVLLTSTA 313 Query: 523 VLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNP 582 + +++GE I +D TE ++ + L ++ + D+I EAV+ D A I +N Sbjct: 314 LQSEDGEFRGSRCILVDYTERRRHEKEL----QQAAVVFDAIREAVIITDDARNIVAVNN 369 Query: 583 VAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSY 642 ++G+T ++ G L + + +++ + T + ++ R+G Y Sbjct: 370 AFTDITGYTLDDVYGRNPR--LQQSGRHDKTFYRSLWRSITEHGHWQGEIENKRRNGEIY 427 Query: 643 DVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRI 702 +I + +G+ V V D++ ++ +QL + A+HD+LT L NR F L Sbjct: 428 PAWQNINVVYDKNGNVANYVSVFSDISVIKEKEKQLRHLANHDSLTGLPNRLLFFNSLEN 487 Query: 703 LLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGG 762 L+ AL+FIDLDRFK +ND+ GH AGD LL+ +A +L +R D++ARLGG Sbjct: 488 SLERARRRRMEVALMFIDLDRFKIINDTMGHEAGDILLKTVARRLLEAVRGEDMVARLGG 547 Query: 763 DEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEV 821 DEF + L + N E A A ++I + G AS GI + + A + Sbjct: 548 DEFTISLEELSNTEDAAAKAGKLIETIRQ-PVHIGGHEIVCSASIGIAIFPHDADNAQNL 606 Query: 822 MSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASP 881 AD A Y +K R Y + E +S + + + ++ N+ + Sbjct: 607 ARAADAAMYRAKELHRNTFEFYTSELTERAIEHLTLSSEMR-QALERNEFELYYQP--QF 663 Query: 882 RIPEARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS 940 + R + +L W +I F D AL + V ++ + A + Sbjct: 664 NLTSGRLVGAETLLRWRHPTRGLITPYCFINIAEDSALIDPIGGWVINQLCRDVAGWLKG 723 Query: 941 --KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPR--LLHLIIPAEAILDH---AESV 993 K I+ +S L + + L+ L P L L + A+ E + Sbjct: 724 GLKLPRIAFNVSSKQLEHYDVKGRIEHALQRWGLEPSDLDLELEVTEGALQHEERSVEVL 783 Query: 994 QKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHA 1053 +++RL G + + G + LK D L +D ++ + ++ L + I Sbjct: 784 RQVRLLGLSVAIDDFGTGYSSLSRLKHMPIDTLKIDRMFIRDLPDDPNNQALASGIILLG 843 Query: 1054 QRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQP 1092 + LG+K +A V + L D G +++ P Sbjct: 844 RALGLKVVAEGVENVEQLRFLQERNCDEAQGFLLSKPLP 882 >UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RS22_9PROT Length = 1006 Score = 742 bits (1917), Expect = 0.0, Method: Composition-based stats. Identities = 187/946 (19%), Positives = 357/946 (37%), Gaps = 52/946 (5%) Query: 183 LRHRNPRLLFESLLTLAITLTLSWLSML-YLPWPFTFIIVLLMWSAVRLPRMEAFLIFLT 241 + +L ++ + + L + +I++ W L A ++ Sbjct: 75 RQRAAQTVLVWGSWVAVTGVSTFFGGLRALLVVAYPLLILMGGW---LLGLRAAAVLASL 131 Query: 242 TVMMVSLMMAAD--------PSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRA- 292 TV+ + + D P A + + LLI+ + R Sbjct: 132 TVLAIVGFVVGDAWAWLPTPPPTPAVMHGLVQGACSLVALLLIVFLVRSYQSRIDDVRRL 191 Query: 293 ------ERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + E A + +G + + + C+ LG + L Sbjct: 192 ASDLAQRTAELQAREADLNRAQAVANVGSWVYDLVSGRIDMSAETCRILGLPTGTVGSLD 251 Query: 347 -FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPL 405 F P+D + Q + GE + E R W + +G PL Sbjct: 252 AFMARVHPDDRDTLQQAAAAALRGE--PFDNELRLVF-GETTRWITQRAEVEFDEEGKPL 308 Query: 406 YFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIP 465 + +DI K+ E ++ E L +E+ G I +L+ + + Sbjct: 309 RSLGTTQDITARKQLEASLREQKEFFRLISESIGEHIAVLDLQGQRLYNSPSYGQFFGDT 368 Query: 466 PHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD-GIRHIRALANRVL 524 ++ + + V PEDR+ ++V R + ++ ++E+R+ D +RH+ + + Sbjct: 369 RDLRGSDS--FADVHPEDRERVKRVFRQTTETGRGQEIEYRLVRNDGSVRHMASAGRVLG 426 Query: 525 NKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVA 584 +++GE R++ ++ D+TE KQ + ER+ T + + D I +N Sbjct: 427 DRQGEAARVVVVSRDVTERKQAEQ-----WERIAATAFESQQGMFITDANAVILRVNQAF 481 Query: 585 EKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDV 644 ++G+ +E +G + + + + + + ++ ++G + Sbjct: 482 TDITGYAADECIGQTPKLL--SSGRHDASFYAAMRESIERNGVWQGEIWNRRKNGDVFPE 539 Query: 645 HYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILL 704 +I+ + DG V + D++ + ++ + A +DALT L NR +LR+ + Sbjct: 540 WLTISSVRDGDGVVTHYVSALTDMSAHKAAQEEIRHLAFYDALTGLPNRRLLHDRLRVAI 599 Query: 705 QTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDE 764 + + ++ AL+FIDLD FK +ND+ GH GD LL+++ + S +R D +ARLGGDE Sbjct: 600 ASSVRSERQGALLFIDLDNFKTLNDTLGHDMGDRLLQQVGQRLSSSVREGDTVARLGGDE 659 Query: 765 FGLLLPDCN--VESA----RFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQA 818 F ++L + E A R + +II +N + G + S GITL Sbjct: 660 FVVMLENLGERPEEAAGQSRIVGEKIIKLLNR-PYDLSGHDYHNTPSVGITLFGGQQVGI 718 Query: 819 AEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGV 878 E+M +AD+A Y +K GR + ++P+ A + RA + D + + + Sbjct: 719 DELMKRADLAMYEAKASGRNALRFFDPRMQAVVTARADIEKDLR-AAVGRQSFFLAYQPQ 777 Query: 879 ASPRIPEARNLWLISLKLWSC-EGEIIDEQTFRRSFSDPALSHALDRRVFHE---FFQQA 934 + + +L W + + F + L L V Sbjct: 778 VD---ASGQVIGAEALLRWQHQQRGTVSPAEFIPVAEETGLILPLGLWVLETACAQAALW 834 Query: 935 AKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESV- 993 A + ++S+ +S A V+ +L L S PR L L + +LD+ + + Sbjct: 835 AARPGRERFTVSVNVSARQFRQANFVDQVLAVLARSGAHPRNLKLELTESMLLDNVQDII 894 Query: 994 ---QKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQ 1050 L+ G L G + LK D L +D ++ + DE++ I Sbjct: 895 AKMSALKARGVGFSLDDFGTGYSSLSYLKQLPLDQLKIDQSFVRDLLTDPNDEVIARTII 954 Query: 1051 GHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 A+ LG+ IA V D L+ G G + + L Sbjct: 955 ALARTLGLSVIAEGVESVEQQDALAAQGCLAYQGYLFSRPLALADF 1000 >UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B8HP13_CYAP4 Length = 1094 Score = 741 bits (1913), Expect = 0.0, Method: Composition-based stats. Identities = 174/815 (21%), Positives = 324/815 (39%), Gaps = 31/815 (3%) Query: 291 RAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGY-SQEELRGLTFQQ 349 + + ++E +R+ E + G+ EG++++ N AL + GY S EEL Sbjct: 265 KRTESALRQAEEKYRSIFENAVEGIFQSSPEGRYIRVNPALARMYGYDSPEELLA-HLTD 323 Query: 350 L-----TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTP 404 + PE + ++LI + E + Y R+G ++W VR G Sbjct: 324 IGRQLYVDPE----RRAEFQRLIDQQTIVTHFEAQVYRRDGSIIWITEHARAVRDGTGKL 379 Query: 405 LYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDK-RMFELYE 463 LY+ +E+I + KRTE Q + +A + + I + R +LY Sbjct: 380 LYYEGTVENITDRKRTELQLLQTTSELKAIFQALPDLYFRVDHDSTILDFKAGRRTDLYL 439 Query: 464 IPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRV 523 P + + + P I L + LE+ + + DG + A + Sbjct: 440 EPEEFLG--RRMTDVLPPPVATQFSGAIDRILSGEARVDLEYVLPMPDGEQTFEARLLPL 497 Query: 524 LNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPV 583 L +++ + ++T+ K+ L Q +E+ ++ E + + NP Sbjct: 498 LQ-----TQIIAVIRNITKRKRAENELRQAEEKYRSIFENATEGIFQSSPSGSYISANPA 552 Query: 584 AEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYD 643 ++ G+ + L L + + + + ++S + + ++ + G Sbjct: 553 LARIYGYDSPQELQHHLTDIGRQLYVNPDRRQQFVHSILEQGQVTDFESQVYRKDGSVIW 612 Query: 644 VHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRIL 703 + + + G+ + ++D++ ++ + Y A HD LT L NRA F+ +L Sbjct: 613 ISENARAVRDRQGNILYFEGTVEDISARKQAELTIHYQAFHDLLTGLPNRALFDDRLNQA 672 Query: 704 LQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGD 763 L A+ F+DLDRFK +ND+ GHA GD LL+++A +L LR D +AR GGD Sbjct: 673 LADARRYQHLLAVFFLDLDRFKVINDTLGHAIGDQLLQQVAQRLLPCLREIDTIARWGGD 732 Query: 764 EFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVM 822 EF LLLP + IA R+++++ F +G + AS GI L + ++ Sbjct: 733 EFTLLLPHVQTPADSVKIAERLLASLK-PPFSLKGHNLHITASLGIALYPHDGEDGTTLL 791 Query: 823 SQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPR 882 AD A Y +K GR + Y P + E A+ + + +++ +L + + Sbjct: 792 RNADAALYRAKEEGRNGLYCYTPMLNSRGHELLALESE-LHKALEQQELDVYYQPQIN-- 848 Query: 883 IPEARNLWLISLKLWSC-EGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS- 940 L L +L W + ++ QTF + L + + V Q + A Sbjct: 849 AATGEILRLEALVRWQHSQLGLVSPQTFIGLAEENGLIMPIGQWVLETACHQCRQWQARG 908 Query: 941 -KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQK 995 G+ ++ LSV LV + E L+ + L L L I + + + + Sbjct: 909 FPGLGTAVNLSVRQFQQPHLVQQVAETLQYTGLAADRLELEITETTAMQNVNLTRTLLHE 968 Query: 996 LRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQR 1055 L G I L G N L+ + +D + ++ D+ ++ + + Sbjct: 969 LDQMGVGIALDDFGSGYSSLNYLRQFPLHSIKIDRTFIQELPYSVQDQAIVKAVIALGRG 1028 Query: 1056 LGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADA 1090 L + +A V + L +G D+I G Sbjct: 1029 LNLSVVAEGVESQSQLKVLRSLGCDIIQGYFFGPP 1063 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 78/403 (19%), Positives = 143/403 (35%), Gaps = 10/403 (2%) Query: 289 AFRAERKHISESETHFRNAMEYSAIGMALVGT-EGQW--LQTNKALCQFLGYSQEELR-- 343 A ++E K + F ++ G+ G+ + QW ++ GYS +EL Sbjct: 6 AIQSEDKEFLAYTSRFLRLIDSLP-GIVFSGSNDAQWSMQYLSRGCLALTGYSSDELAQK 64 Query: 344 -GLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDG 402 G F +T PEDL + L + I+ Y +E R ++G+ W L V D Sbjct: 65 GGEAFNAITHPEDLPRVLATLSAAIASS-EPYEVEYRIRTKSGEEKWVLEKGHRVLDEDQ 123 Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELY 462 I DI LKR E Q R I + + + + L Sbjct: 124 CTCGIEGFITDITPLKRAEAALIQAEARWRSLIHNSSDLITILDAQGTVLYHSPVLKRLL 183 Query: 463 EIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRS-PFKLEFRITVKDGIRHIRALAN 521 P + V P+DR+ ++ + ++ +E+R +DG Sbjct: 184 GYHPQNCEGKSAF-GLVHPQDRKQVQQTFQQAITHTEFTLTVEYRFRHQDGSWRFLESTG 242 Query: 522 RVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMN 581 R L + V ++ D+T+ K+ AL Q +E+ ++ E + + +N Sbjct: 243 RNLLADPAVAGIVVNTRDITDHKRTESALRQAEEKYRSIFENAVEGIFQSSPEGRYIRVN 302 Query: 582 PVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGS 641 P +M G+ E L L + + D E D + ++ R G Sbjct: 303 PALARMYGYDSPEELLAHLTDIGRQLYVDPERRAEFQRLIDQQTIVTHFEAQVYRRDGSI 362 Query: 642 YDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASH 684 + + G + ++++T+ ++ QL + S Sbjct: 363 IWITEHARAVRDGTGKLLYYEGTVENITDRKRTELQLLQTTSE 405 Score = 98.4 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 35/164 (21%), Positives = 66/164 (40%), Gaps = 11/164 (6%) Query: 274 LLILLPANIMTMVMYAFRAERKH--ISESETHFRNAMEYSAIGMALVGTEGQWLQTNKAL 331 LL LL I+ ++ + +R + ++E +R+ E + G+ G ++ N AL Sbjct: 494 LLPLLQTQIIAVIRNITKRKRAENELRQAEEKYRSIFENATEGIFQSSPSGSYISANPAL 553 Query: 332 CQFLGYSQEELRGLTFQQL-----TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGD 386 + GY + + P+ + + + L G++ + E + Y ++G Sbjct: 554 ARIYGYDSPQELQHHLTDIGRQLYVNPDRRQQFVHSI--LEQGQVTDF--ESQVYRKDGS 609 Query: 387 VVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMER 430 V+W VR G LYF +EDI+ K+ E Sbjct: 610 VIWISENARAVRDRQGNILYFEGTVEDISARKQAELTIHYQAFH 653 >UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Bacteria RepID=B1XZA8_LEPCP Length = 1147 Score = 740 bits (1910), Expect = 0.0, Method: Composition-based stats. Identities = 187/819 (22%), Positives = 325/819 (39%), Gaps = 28/819 (3%) Query: 294 RKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWP 353 ++ ++ SE H R + + L +G + + L +E++ G L P Sbjct: 340 QQALAASERHLRAVVAALPDLIFLFDADGVIVDLWASQQDKLLMPREQVIGRAIADLLPP 399 Query: 354 EDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIED 413 L + ++++ E E +G+ +R +A D Sbjct: 400 SLTATALHHIARVLA-EDAAQIFEYTLPLPDGE------HGFEMRMARAGSREVLAIARD 452 Query: 414 INELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQ 473 I + Q+ + LA + G G+W+W+L + S+ L P + Sbjct: 453 ITAERDARAALQRSEASLRLAVDGSGDGLWDWDLITDKISFGAAYARLLRYPGNDLARDF 512 Query: 474 VWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD-GIRHIRALANRVLNKEGEVER 532 + E + P+DR + +R+S++ +PF +R+ D R + + G +R Sbjct: 513 RFRERLHPDDRDRSIAAVRNSIEYGTPFVATYRMRCFDGEYRWFQGRGMCHRDAHGTPQR 572 Query: 533 LLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQ 592 G+ D+T+ Q E L DS E V+ D +I +N + G+T+ Sbjct: 573 FSGVLTDLTDRLQAEERL----RLAAQVFDSTQEGVMITDARRRIVSVNRAFTTLLGYTE 628 Query: 593 EEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLS 652 E LG + + + E + + + ++ + G SI+ + Sbjct: 629 TEVLGQTPRML--SSGRHDRDFYEAMQAQLDHTGLWQGEIWNRHKDGSPVPELLSISAVR 686 Query: 653 TLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQ 712 G V V D+T ++ +L + A HD LTHL NR F +L L + Sbjct: 687 DPHGQVTHYVGVFTDITHLKESEARLEFLAHHDPLTHLPNRLLFNNRLDQALHQAEREGR 746 Query: 713 RHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC 772 R A++ +DLDRFK +NDS GH AGD LL+ +A + LR SD LARLGGDEF LL+ D Sbjct: 747 RLAVLLLDLDRFKDINDSYGHLAGDELLKYVAQRLTQRLRQSDTLARLGGDEFALLMHDL 806 Query: 773 -NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYA 831 + + A +A+ ++S +++ EG VG S GI + D+ ++ AD A Y Sbjct: 807 RHDDDAARLASELLSGLSEPWRSSEGVEVSVGVSIGICIYPDHGRTPQTLLQGADAALYR 866 Query: 832 SKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWL 891 +K GRG Y + ER + R + + QL++ R R + Sbjct: 867 AKGDGRGVYRYYADEMTRIARERLHIEA-RLRRALADGQLLLHYQPQVDLR--SGRIIGA 923 Query: 892 ISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS--KGISISLP 948 +L W E +I F L + V E +QA + + +++++ Sbjct: 924 EALVRWQDPEQGLIPPVRFIPVAEATGLIGEIGAWVLGEACRQARAWLDAGLPALTVAVN 983 Query: 949 LSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRLAGCRIV 1004 +S A L +++ L + LPP L L + A+++ + +Q+LR G + Sbjct: 984 VSPRQFHQADLATQVMQVLVETGLPPTHLELELTEGALMEREAEALQVLQRLRGLGVGVA 1043 Query: 1005 LSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGP 1064 + G SLK D L +D ++ + D + I LG+ +A Sbjct: 1044 IDDFGTGYSSLASLKRFPIDVLKIDRSFITDIPDDPDDMEIAAAIIAMGHSLGILVLAEG 1103 Query: 1065 VVLPLVMDTLSGIGVDLIYGEVIADAQP---LDLLVNSS 1100 V + L D G + + P + L+ Sbjct: 1104 VETAEQLAFLQQRNCDRYQGFLRSRPLPAQAFEQLLREQ 1142 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 84/472 (17%), Positives = 172/472 (36%), Gaps = 51/472 (10%) Query: 251 AADPSLLATPRTYLMSHMP----WLPFLLILLPANIMTMVMYAFRAERKHISESETHFRN 306 A +L+ T + P W + LL A++ ++ ++ ++ + Sbjct: 5 AGGATLILLLGTAWLVAGPQPASWFTAIQTLLCASLAGWLIRRAARAQEQAEQAHKRVAD 64 Query: 307 AMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKL 366 + +A+G++L +G+ + N+ + +G + EE + L FQ +T P+DL DL +V L Sbjct: 65 VVADAAVGISLTALDGRLTEVNRRFAEIVGRTVEETQRLRFQDITHPDDLAADLDKVADL 124 Query: 367 ISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQ 426 ++G I+ Y MEKRY + +W L VSL R DG P FI+ ++DI +K+ E + Sbjct: 125 LAGRIDRYRMEKRYLRPDSSTIWVTLTVSLARGADGQPRQFISVVQDITAVKQAEGDLLR 184 Query: 427 LMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPE-DRQ 485 ++ ++ + +L + L + + E + PE + Sbjct: 185 QRRQLQQIIQSIPDCVAVRDLDGRYLLANPAAERLIGLSEAEICGRTL--EQIYPEPEAG 242 Query: 486 HAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA-NRVLNKEGEVERLLGINMDMTEVK 544 A + R +L + E T DG LA + +L +G ++ + D++ + Sbjct: 243 QARRADRLALSQNGLVRREASYTAADGSVATVDLAISPLLGIDGRATGIISVGRDVSRER 302 Query: 545 QL-----------------------------------NEALFQEKERLHITLDSIGEAVV 569 +AL + L + ++ + + Sbjct: 303 HNLRLLEQAHRRNHELLAEAERSRLALLSLLEDQQLGQQALAASERHLRAVVAALPDLIF 362 Query: 570 CIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIE 629 D I + + +E+ +G + +L + + +I +A Sbjct: 363 LFDADGVIVDLWASQQDKLLMPREQVIGRAIADLLPPSL--TATALHHIARVLAEDAAQI 420 Query: 630 QDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYS 681 + L G + + + + +D+T R L S Sbjct: 421 FEYTLPLPDGE------HGFEMRMARAGSREVLAIARDITAERDARAALQRS 466 >UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V7A4_9PROT Length = 1013 Score = 738 bits (1905), Expect = 0.0, Method: Composition-based stats. Identities = 182/947 (19%), Positives = 351/947 (37%), Gaps = 57/947 (6%) Query: 184 RHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEA-------F 236 R R + + LP I +L + + A F Sbjct: 84 RLMRFRFGVLVSGVIWGGASFLLFPQENLPHQMFLIFMLAGLTTASVVSYSADLVSAVIF 143 Query: 237 LIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKH 296 + + T ++ L++ +D +A L+ +L FL++ L ++ Sbjct: 144 ALSIVTPLIARLLIVSDELAMAMAIAVLL----YLGFLMVSLRLINRNLIENIRMRHEGE 199 Query: 297 ISE-----SETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 + E S+ +R + +S +G+ N + +G ++ GL L+ Sbjct: 200 LREAAMNVSKERYRLLLAHSPVGIFHYDLNFVITYCNARFAELIGCPVAQVNGLDLYNLS 259 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 N L + ++G+ + + + +G W + + G + IA + Sbjct: 260 ----DNAVLPALTAALAGDRGYFEGQYQAVFNDG---WIAMTCAASCDARGNVIGGIAIV 312 Query: 412 EDINELKRTEQVNQQLMER-------ITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI 464 E I+E K E ++ + +G+W + I ++ I Sbjct: 313 ESIHERKMAEMALALSNQKHDEERKLFQTILDNLPLGMWMLGVDGKIKFVNETFCNALGI 372 Query: 465 PPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALAN-RV 523 H + + + + ++ R P + DG H+ + R+ Sbjct: 373 AAHDFFDAGHYSDLLPLSIADKCKESDRACFMQGEPHYSTEWLPFTDGRAHLLEMTRVRL 432 Query: 524 LNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPV 583 + V L+G+ D+TE +++ L E ++ D I +N Sbjct: 433 HDSANNVTGLIGLAADITERQKVESELRIAAAAFE-----AQEGMLITDRHNVIMRVNQA 487 Query: 584 AEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYD 643 ++G+ EE LG + + + ++++ + E +V + G Y Sbjct: 488 FTSITGYLAEEVLGKNPCFL--ASGRHDAGFYQSMWEGLNEKGKWEGEVWNRRKDGEIYP 545 Query: 644 VHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRIL 703 + I+ + + V +D+T ++ ++ A +D LT L NR +L Sbjct: 546 EYLLISAVKDIKNEVANYVATFRDITANKAAESEIKKLAFYDPLTLLPNRRLLTDRLNHA 605 Query: 704 LQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGD 763 L + AL+FIDLD FK +ND+ GH GDALL+++A + S +R D LARLGGD Sbjct: 606 LASSARNRNIGALLFIDLDNFKTLNDTLGHDMGDALLKQVALRLKSCIREDDTLARLGGD 665 Query: 764 EFGLLLPDCN------VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQ 817 EF ++L + + A I +I++A+N + + + AS G+TL + Sbjct: 666 EFVVILENLSELAMDAATKAELIGEKILAALNQ-VYPLASQEYHGAASIGVTLFAGHALS 724 Query: 818 AAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHG 877 E+M QADIA Y SK GR + ++ +ERA + ++ + + + + QL + Sbjct: 725 IDELMKQADIAMYQSKKSGRNTLRFFDLDTQKIINERAELEIELR-KAVDKKQLHLHYQI 783 Query: 878 VASPRIPEARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAK 936 + L +L W +I F D L + + V Q Sbjct: 784 QLN---SVGTPLSAEALIRWVHPVRGLISPAHFIPLAEDTGLILPIGQWVLDTACAQLHS 840 Query: 937 AVASK---GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE-- 991 + +++++ +S V + E ++ + P+LL L + ++++ E Sbjct: 841 WQDERFTQDLTLAVNVSAKQFHQKNFVALVKETVQRHAINPKLLKLELTESMLVENIEDI 900 Query: 992 --SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITII 1049 ++ LR G + L G LK + L +D + + D ++ I Sbjct: 901 IVTMNALREMGIQFSLDDFGTGYSSLQYLKRLPLNQLKIDQSFVRELSSSSSDRAIVRTI 960 Query: 1050 QGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 A+ L + IA V L IG + G + P++ L Sbjct: 961 VAMAESLNLNVIAEGVETEEQHTLLQDIGCNYYQGYLFGKPMPIEQL 1007 >UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q608F9_METCA Length = 965 Score = 735 bits (1898), Expect = 0.0, Method: Composition-based stats. Identities = 177/815 (21%), Positives = 326/815 (40%), Gaps = 28/815 (3%) Query: 295 KHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPE 354 E +E + + + +G+ NK + GY+ EE+ G L P Sbjct: 154 HETEEKLHRLAAIVESTGDTVIVSDLQGRIRTWNKGAERMWGYAAEEIIGQPVTVL-PPL 212 Query: 355 DLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDI 414 + Q+ + + E E R +++G L VS + + A I DI Sbjct: 213 AKQGEPGQILRRVIDEHEVVRFESRGLHKDGRDFPISLTVSPLFDAENRLTGVSAIIRDI 272 Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQV 474 E++R + Q+ ++ + + + + + + N + Sbjct: 273 TEMERLKATLQERLKLVEMVFQYSVSCLVVLDPQFNFIRVNPAYARACRRDVAEFEGRNH 332 Query: 475 WYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITV-----KDGIRHIRALANRVLNKEGE 529 + + P D A + + +++R PF+ R + G+ + VL+ +GE Sbjct: 333 FE--LYPSD---ARFIFEEVVRTRRPFEAVARPFTFPDQPERGVTYWDWNLVPVLDGKGE 387 Query: 530 VERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSG 589 VE LL +D+T+ ++ L + +AV+ D +I +NP E ++G Sbjct: 388 VEYLLFSLVDVTDRQKATAQL----RLIETAFQHTRDAVLITDARARILRVNPAFETITG 443 Query: 590 WTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSIT 649 ++ E +G + + +G + A + ++ R G + S++ Sbjct: 444 YSAGEVVGRTPRMLQ--SGRHDGAFYRRFWRALETEGHWSGEIWNRHRDGHIFPAWQSVS 501 Query: 650 PLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNS 709 + DGS V + D++E ++ Q+ Y + HD LT L NRA F+ +L L++ Sbjct: 502 AVKGPDGSTTHYVSIFTDISEFKRAEAQIRYLSYHDDLTGLPNRAYFQARLDQLIEAAAR 561 Query: 710 THQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLL 769 ++ ALV +DLDRFK +NDS GH+ GD LL ++A + D +AR GGDEF ++L Sbjct: 562 DRKQIALVVLDLDRFKTINDSLGHSVGDELLCQVAERIQDCTGQGDFVARQGGDEFVVIL 621 Query: 770 PDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIAC 829 D + A +A +ISA+ + GR V S GI+L + + ++ AD A Sbjct: 622 ADSDAVRAARVANAMISAIAK-PAVAGGRTLIVTPSLGISLYPHDAGDSESLIKSADAAM 680 Query: 830 YASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNL 889 Y +K+ GR + + +A +ER A+ + + + + + + R + Sbjct: 681 YHAKSLGRNTYQFFSAEMSAVATERLALE-NALHQALSNGEFRLYYQP--QIEVCSRRLI 737 Query: 890 WLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKG--ISIS 946 L +L W E + F + + H + R V E +Q + A+ + ++ Sbjct: 738 GLEALIRWRHPEVGWVPPLRFIPLAEETGIIHRIGRWVLEEACRQQREWQAAGLCIVPVA 797 Query: 947 LPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH----AESVQKLRLAGCR 1002 + LS L + L L P LL L + A++ ++ ++KL+ G R Sbjct: 798 VNLSPLQLQKDDFPEQVEALLSGCRLAPGLLELELTETAVMRDVGRMSDMLRKLKERGTR 857 Query: 1003 IVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIA 1062 + G L D L +D +V + I A++L +K +A Sbjct: 858 FSIDDFGTGYSSLGYLNRFPVDKLKIDQSFIRDVTRREDHAAITRAIIALAKQLHLKVVA 917 Query: 1063 GPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 V ++ L G D G + P D + Sbjct: 918 EGVETAEQLEFLERAGCDGAQGFYFSRPVPADEIA 952 Score = 178 bits (453), Expect = 8e-43, Method: Composition-based stats. Identities = 56/264 (21%), Positives = 117/264 (44%), Gaps = 8/264 (3%) Query: 418 KRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPH-IKPNWQVWY 476 KR E ++ + A + +G WE +L W ++F ++EI P + +++ + Sbjct: 26 KRAEAALRRSAFHLREAQQVANLGSWELDLVQGRLEWSDQVFRIFEIDPERFEASYEAFL 85 Query: 477 ECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD-GIRHIRALANRVLNKEGEVERLLG 535 V P+DR+ + R S+ R +++ R+ + D ++H+R +++G R +G Sbjct: 86 ALVHPDDRERVDAAYRRSIADRGSYEIVHRLLMPDGRVKHVRERCQTFYSEDGRPLRSVG 145 Query: 536 INMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEA 595 D+T + E L + L ++S G+ V+ D+ +I N AE+M G+ EE Sbjct: 146 TVWDVTSFHETEEKLHR----LAAIVESTGDTVIVSDLQGRIRTWNKGAERMWGYAAEEI 201 Query: 596 LGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLD 655 +G P+ + G + + + + + G + + +++PL + Sbjct: 202 IGQPVTVL--PPLAKQGEPGQILRRVIDEHEVVRFESRGLHKDGRDFPISLTVSPLFDAE 259 Query: 656 GSNIGSVLVIQDVTESRKMLRQLS 679 G +I+D+TE ++ L Sbjct: 260 NRLTGVSAIIRDITEMERLKATLQ 283 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 70/416 (16%), Positives = 143/416 (34%), Gaps = 19/416 (4%) Query: 271 LPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKA 330 L + +P + ++ + + S H R A + + +G + L+ + Sbjct: 6 LALGVAFVPIALAYGLLLKPKRAEAALRRSAFHLREAQQVANLGSWELDLVQGRLEWSDQ 65 Query: 331 LCQFLGYSQEELRGLT--FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVV 388 + + E F L P+D + + I+ + +Y + R +G V Sbjct: 66 VFRIFEIDPERFEASYEAFLALVHPDDRERVDAAYRRSIA-DRGSYEIVHRLLMPDGRVK 124 Query: 389 WALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELK 448 DG PL + + D+ TE+ R+ E+ G + +L+ Sbjct: 125 HVRERCQTFYSEDGRPLRSVGTVWDVTSFHETEEKLH----RLAAIVESTGDTVIVSDLQ 180 Query: 449 PNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAE--KVIRDSLQSRSPFKLEFR 506 I +W+K ++ V VLP + E +++R + + E R Sbjct: 181 GRIRTWNKGAERMWGYAAEEIIGQPV---TVLPPLAKQGEPGQILRRVIDEHEVVRFESR 237 Query: 507 ITVKDGIRH-IRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIG 565 KDG I + + + E + + I D+TE+++L L + + + + Sbjct: 238 GLHKDGRDFPISLTVSPLFDAENRLTGVSAIIRDITEMERLKATLQERLKLVEMVFQYSV 297 Query: 566 EAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSR 625 +V +D +NP + E G + D + E + Sbjct: 298 SCLVVLDPQFNFIRVNPAYARACRRDVAEFEGRNH---FELYPSDARFIFEEVVRTRRPF 354 Query: 626 SAIEQDVVL--HCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLS 679 A+ + G +Y +++ P+ G + + DVT+ +K QL Sbjct: 355 EAVARPFTFPDQPERGVTYW-DWNLVPVLDGKGEVEYLLFSLVDVTDRQKATAQLR 409 Score = 89.9 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 31/143 (21%), Positives = 61/143 (42%), Gaps = 1/143 (0%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 +R+ + A +++ + + + L+ N A GYS E+ G T + L Sbjct: 399 TDRQKATAQLRLIETAFQHTRDAVLITDARARILRVNPAFETITGYSAGEVVGRTPRMLQ 458 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 ++ + + E + +S E +R+G + A +VS V+ DG+ ++++ Sbjct: 459 SGRHDGAFYRRFWRALETEGH-WSGEIWNRHRDGHIFPAWQSVSAVKGPDGSTTHYVSIF 517 Query: 412 EDINELKRTEQVNQQLMERITLA 434 DI+E KR E + L L Sbjct: 518 TDISEFKRAEAQIRYLSYHDDLT 540 Score = 45.3 bits (106), Expect = 0.013, Method: Composition-based stats. Identities = 24/147 (16%), Positives = 42/147 (28%), Gaps = 2/147 (1%) Query: 544 KQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTV 603 K+ AL + L +D+ + ++ E Sbjct: 26 KRAEAALRRSAFHLREAQQVANLGSWELDLVQGRLEWSDQVFRIFEIDPERFEA-SYEAF 84 Query: 604 LHITFGDNGPLMENIYSA-DTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSV 662 L + D+ ++ Y R + E L G V + DG + SV Sbjct: 85 LALVHPDDRERVDAAYRRSIADRGSYEIVHRLLMPDGRVKHVRERCQTFYSEDGRPLRSV 144 Query: 663 LVIQDVTESRKMLRQLSYSASHDALTH 689 + DVT + +L A+ T Sbjct: 145 GTVWDVTSFHETEEKLHRLAAIVESTG 171 >UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNA9_9PROT Length = 1399 Score = 733 bits (1894), Expect = 0.0, Method: Composition-based stats. Identities = 165/809 (20%), Positives = 320/809 (39%), Gaps = 35/809 (4%) Query: 306 NAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT---WPEDLNKDLQQ 362 A+E S + + + + N + + GYS+ E G + L P D + L Sbjct: 599 QAVEQSPVAIVITNRNAEIEYVNPSFTRVTGYSRLEAIGQNPRILQSGEAPSDTYRSL-- 656 Query: 363 VEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQ 422 + L+ G++ ++ +NG++ W +++ + G +++A ED+ E R ++ Sbjct: 657 WQTLLEGKV--WTGLFHNRRKNGELFWEKASIAPIIGDHGEVTHYLAVKEDVTERLRADK 714 Query: 423 VNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVL-- 480 + Q+ E E + + + ++ EL + + + Sbjct: 715 LLQESEEAFRRLFEDAKDPLLLLK-DGSFIDCNRATLELLGYGSKAQLLGRDAADISPAR 773 Query: 481 -PEDRQHAEKVIRDSLQSRS--PFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGIN 537 P+ + EK + + E+ DG + + GEV L + Sbjct: 774 QPDGQASGEKAAALIAAALRIGYHRFEWTHQRADGSPVPVEVTLTPITLRGEVI-LHTLW 832 Query: 538 MDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALG 597 D++E + L L + EA++ D +I +N +++G+ +E G Sbjct: 833 RDISERRVTETRL----RLLAAAFEHSAEAIMVSDRDNRILEVNDAFCRLTGYAADEVRG 888 Query: 598 VPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGS 657 + + + ++ A S + +V + G Y SI+ + +G+ Sbjct: 889 SDPRLL--SSGRTSAEEYRTMWQAINSTGHWQGEVWDRRKDGSYYPKWLSISTIRGAEGN 946 Query: 658 NIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNS--THQRHA 715 + D++E + ++S+ A D LT L NR++ + +L L + + A Sbjct: 947 TEYYIGSFVDISERKAAEEKISHLAHFDTLTDLPNRSNLQGRLDQALASARREGHGRSVA 1006 Query: 716 LVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE 775 ++F+DLDRFK +ND+ GH GDALL E+A+ + S +R SDV+ARLGGDEF ++L + Sbjct: 1007 VMFLDLDRFKNINDTLGHHVGDALLLEVAARLRSSVRDSDVVARLGGDEFVVVLTGADAL 1066 Query: 776 SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNG 835 +A +A +I+ A++ + EG +S GI + + +M AD A Y +K+ Sbjct: 1067 AAERVAGKILKALSRA-YQIEGHALHSTSSIGIAVFPADGESVEVLMQNADAAMYHAKSA 1125 Query: 836 GRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLK 895 GR V + A S+R + D +++ Q ++ + R + +L Sbjct: 1126 GRNNVQFFTASMNEAASDRRQLEEDLHL-ALQQKQFVLHYQPQVDAQ---RRVFAVEALL 1181 Query: 896 LWSCEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA---VASKGISISLPLSV 951 W ++ F D L + + V Q ++ + +++ +S Sbjct: 1182 RWQHPHHGLVPPARFVPLAEDTGLIVPIGQWVLETACAQIKAWSVDARTRKLQVAVNVSA 1241 Query: 952 AGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRLAGCRIVLSQ 1007 V L + ++NS P L L + +LD+ + + ++L G + Sbjct: 1242 RQFRQPDFVELLRQAIDNSGANPARLKLELTESLVLDNVADTIDKMNAIKLLGVTFSMDD 1301 Query: 1008 VGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVL 1067 G + L D L +D + N D ++ I + LG+K +A V Sbjct: 1302 FGTGYSSLSYLTRLPLDQLKIDRAFVCRLPENRSDAVIAQTIVTMGRSLGLKVVAEGVET 1361 Query: 1068 PLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 L G D G + + +D Sbjct: 1362 EAQRQFLDSHGCDGYQGFLFSRPLAVDAF 1390 Score = 155 bits (393), Expect = 8e-36, Method: Composition-based stats. Identities = 80/422 (18%), Positives = 159/422 (37%), Gaps = 21/422 (4%) Query: 280 ANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQ 339 A ++ ++ R R + SE F+ E + G+ + +G L N AL + + Q Sbjct: 326 AKVVADLVERDRQLRAN-SERLEIFQRLAENAGQGIGMAQLDGSLLYANPALRRMIDMPQ 384 Query: 340 EELRG-LTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVR 398 +F+Q E+ N+ V ++ ++ E + +G A+ + +V Sbjct: 385 GAACSDYSFKQFYSREEANRLQHAVLPMLL-PAGQWTGEIELRSLSGRTTPAIHTLFVVH 443 Query: 399 HTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRM 458 +T P + DI+E K E+ N+QL+ + +GI + + S ++R+ Sbjct: 444 NTADEPPVIATVLADISERKEMEERNRQLLAEMETLLGNALVGIVHLRQRC-VVSCNRRL 502 Query: 459 FELYEIPPH--IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHI 516 E++ P I + QV+Y + E + + F E + KDG Sbjct: 503 EEIFGYAPGELIGKSSQVFYPSI--EVFEKIGARAYAVVAENRNFSGELTLRRKDGSLFW 560 Query: 517 RALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMK 576 AL R ++ + + D+ +E L ++ A+V + + Sbjct: 561 GALTGRAIDPSQPHAGSIWVFADI----SERREAEEESRNLLQAVEQSPVAIVITNRNAE 616 Query: 577 ITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHC 636 I ++NP +++G+++ EA+G + + +++ Sbjct: 617 IEYVNPSFTRVTGYSRLEAIGQNPRILQSGEAPSDT--YRSLWQTLLEGKVWTGLFHNRR 674 Query: 637 RSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASF 696 ++G + SI P+ G + V +DVTE + + L S A R F Sbjct: 675 KNGELFWEKASIAPIIGDHGEVTHYLAVKEDVTERLRADKLLQESEE-------AFRRLF 727 Query: 697 EK 698 E Sbjct: 728 ED 729 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 77/471 (16%), Positives = 162/471 (34%), Gaps = 49/471 (10%) Query: 283 MTMVMYAFRAERKHISESETHFRNAME----YSAIGMALVGTEGQWLQTNKALCQFLGYS 338 + + A +ERK + E ME + +G+ + + + N+ L + GY+ Sbjct: 451 VIATVLADISERKEMEERNRQLLAEMETLLGNALVGIVHL-RQRCVVSCNRRLEEIFGYA 509 Query: 339 QEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVR 398 EL G + Q ++ + + + E +S E ++G + W L + Sbjct: 510 PGELIGKSSQVFYPSIEVFEKIGARAYAVVAENRNFSGELTLRRKDGSLFWGALTGRAI- 568 Query: 399 HTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRM 458 I DI+E + E+ ++ L++ + E + I I + Sbjct: 569 DPSQPHAGSIWVFADISERREAEEESRNLLQAV----EQSPVAIVITNRNAEIEYVNPSF 624 Query: 459 FELYEIP--PHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHI 516 + I N ++ P D + + + L+ + L + Sbjct: 625 TRVTGYSRLEAIGQNPRILQSGEAPSDTYRS--LWQTLLEGKVWTGLFHNRRKNGELFWE 682 Query: 517 RALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMK 576 +A ++ GEV L + D+TE + ++ L + +E + + ++ + Sbjct: 683 KASIAPIIGDHGEVTHYLAVKEDVTERLRADKLLQESEEAFRRLFEDAKDPLLLL-KDGS 741 Query: 577 ITFMNPVAEKMSGW-TQEEALGVPLLTVLHITFGD---NGPLMENIYSADTSRSAIEQDV 632 N ++ G+ ++ + LG + D +G + +A + Sbjct: 742 FIDCNRATLELLGYGSKAQLLGRDAADISPARQPDGQASGEKAAALIAAALRIGYHRFEW 801 Query: 633 VLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLAN 692 G V ++TP+ TL G I + +D++E R +L A Sbjct: 802 THQRADGSPVPVEVTLTPI-TLRGEVI-LHTLWRDISERRVTETRLRLLA---------- 849 Query: 693 RASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSA----GHAAGDAL 739 A+FE + + ++ VND+ G+AA D + Sbjct: 850 -AAFEHSAE-AIMVSDRDNRIL-----------EVNDAFCRLTGYAA-DEV 886 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 35/164 (21%), Positives = 69/164 (42%), Gaps = 1/164 (0%) Query: 271 LPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKA 330 + I L ++ ++ +ER+ A E+SA + + + + L+ N A Sbjct: 815 VTLTPITLRGEVILHTLWRDISERRVTETRLRLLAAAFEHSAEAIMVSDRDNRILEVNDA 874 Query: 331 LCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWA 390 C+ GY+ +E+RG + L+ ++ + + + I + E ++G Sbjct: 875 FCRLTGYAADEVRGSDPRLLSSGRTSAEEYRTMWQAI-NSTGHWQGEVWDRRKDGSYYPK 933 Query: 391 LLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLA 434 L++S +R +G Y+I DI+E K E+ L TL Sbjct: 934 WLSISTIRGAEGNTEYYIGSFVDISERKAAEEKISHLAHFDTLT 977 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 21/160 (13%), Positives = 52/160 (32%), Gaps = 2/160 (1%) Query: 531 ERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGW 590 +R + D+ E + A + E ++ G+ + + + + NP +M Sbjct: 323 QREAKVVADLVERDRQLRANSERLEIFQRLAENAGQGIGMAQLDGSLLYANPALRRMIDM 382 Query: 591 TQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITP 650 Q A + + + L + ++ L SG + +++ Sbjct: 383 PQGAACSDYSFKQFY-SREEANRLQHAVLPMLLPAGQWTGEIELRSLSGRTTPAIHTLFV 441 Query: 651 LSTLDGSNIGSVLVIQDVTESRKMLRQLSY-SASHDALTH 689 + V+ D++E ++M + A + L Sbjct: 442 VHNTADEPPVIATVLADISERKEMEERNRQLLAEMETLLG 481 >UniRef50_D0IUW1 Diguanylate cyclase/phosphodiesterase with n=3 Tax=Comamonadaceae RepID=D0IUW1_COMTE Length = 900 Score = 733 bits (1894), Expect = 0.0, Method: Composition-based stats. Identities = 192/884 (21%), Positives = 351/884 (39%), Gaps = 26/884 (2%) Query: 230 LPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYA 289 L ++L M+ A S + ++ L A + + + Sbjct: 10 LTPWVIVTLYLCVGMLWLGAQAGVLGYFDV-SLNRQSLRWQIGLFIVWLLATALIALWFM 68 Query: 290 FRAER--KHISESETHFRNAMEYSAIGMALVGTEG-QWLQTNKALCQFLGYSQEELRGLT 346 R R + E+ + ++ GMA V G + + N L +LG S E LRG Sbjct: 69 QRKARADQRGRETAQELELVVRHAPAGMARVHVGGAEIVWANAKLAGWLGCSVESLRGQD 128 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRN-GDVVWALLAVSLV--RHTDGT 403 F+ L D + Q+++L+ G + + + ++ N + G V L S V DG Sbjct: 129 FRVLVPVNDQDDVALQLQRLLDGSTDYFQVLRQCVNADTGKVTPVLCTTSRVAASGVDG- 187 Query: 404 PLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYE 463 P+ + ++D++E+ + + LA E G G+WEW+ ++ M L Sbjct: 188 PVALVCVLQDLSEMVSARNAMMRSETMLRLALEGSGNGVWEWDALEQRLNFSTGMSALLR 247 Query: 464 IPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANR 522 +++ + PED A +L+ S L R+ DG R RA Sbjct: 248 YQGQDLAREFDFHQRLHPEDAAGARAQAEQALEQGSMLVLTARLLCFDGLYRWFRARGQA 307 Query: 523 VLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNP 582 ++ G + R+ G+ D T ++ +E +D+ E VV D +I +N Sbjct: 308 YKDESGRLIRISGLLSDQTASREADERS----RLASTVVDNTIEGVVVTDAHSRILSVNH 363 Query: 583 VAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSY 642 K+ G+++ E LG + + + ++++ + + ++ ++G + Sbjct: 364 AFTKLLGFSEAEMLGKTPRMFK--SGRHDKAFYDAMWASMHATGHWQGEIWNRRKNGEVF 421 Query: 643 DVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRI 702 S++ + + V + D++ + +QL + A D LT L NR+ F + L Sbjct: 422 PERMSLSAVKDANDKVTHYVCMFTDISAEKAREQQLEFLAHRDTLTGLPNRSQFTRMLGE 481 Query: 703 LLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGG 762 ++ ST++R A++ ++DRFK VNDS GH+ GD +LR ++ M LR D++ RL G Sbjct: 482 AVELSQSTNRRMAVLLFNIDRFKDVNDSYGHSIGDEVLRHVSVQMQGALRHGDIIGRLAG 541 Query: 763 DEFGLLL-PDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEV 821 DE ++ C +SA +A R+++A +G V SAGI L D+ A ++ Sbjct: 542 DEICVVAQSICGRDSAVDVAERLMAAAGQPWTTPDGLSVVVSVSAGICLYPDHALTADDL 601 Query: 822 MSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASP 881 + A A Y +K G + A ER A+ R ++ + + Sbjct: 602 LQGAHAAVYGAKARGSNAWCFFHENMTQAARERLALEA-RLRRALELGHMRLYYQP--QI 658 Query: 882 RIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS 940 + R + +L W E +I F + + L V E +Q + A+ Sbjct: 659 ELATGRLVGAEALLRWLDPEEGLISPARFIPVAENSGVIGPLGLWVLGEACRQGQQWRAA 718 Query: 941 --KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQ 994 ++I++ +S+ + E L S P LL L I A+ + E + Sbjct: 719 GLPDLAIAVNVSLHQFLLTDIAGATAEALNKSGFPASLLELEITESALAEKPEEALAVLN 778 Query: 995 KLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQ 1054 +LR G R+ + G LK D L +D ++ + D + + + Sbjct: 779 RLRELGLRLAIDDFGTGYSSLAHLKRFPLDLLKIDQGFIRDIPHSADDMTISSSVIALGH 838 Query: 1055 RLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 +G+K +A V + L G D G + P + Sbjct: 839 AMGLKVLAEGVETQEQLSFLQQKGCDYFQGYFCSRPLPAEDFTR 882 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 733 bits (1892), Expect = 0.0, Method: Composition-based stats. Identities = 194/883 (21%), Positives = 345/883 (39%), Gaps = 30/883 (3%) Query: 227 AVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMV 286 A+RL A L V+ + + S M ++ + +LL +V Sbjct: 7 ALRLSGTFALAGVLWIVLSDRFLASLPVSTQTLMMLQTYKGMGFVAGISLLL----YYLV 62 Query: 287 MYAFRAERK---HISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELR 343 A +++ + + ++ F+ A + +G + + + A Q LG E R Sbjct: 63 RRALKSQAQLLVQLRRNQALFQEAQLSAQLGSWEYDSARREFLWSGAARQLLGLPASETR 122 Query: 344 GL--TFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTD 401 T Q D + ++ +++ + S+E VW L V + Sbjct: 123 TERGTLLQRVAAGDRARVATVLDAMLA--EGSGSVEFCRAGTGAAPVWLRLH-YQVHLDE 179 Query: 402 GTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFEL 461 P + ++DI+ K + ++ + E +GI L + ++R+ ++ Sbjct: 180 EAPGLVLGVLQDISVQKAQDDALREREQLFRGTFEQAAVGIAHLGLDGHWIRVNQRLCDI 239 Query: 462 YEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSP-FKLEFRIT-VKDGIRHIRAL 519 + + P D+ + R L P F +E R + + Sbjct: 240 LGYSREELLRLTL-QDITHPADQDSDLVMTRRLLSGEIPSFSIEKRYRQRRGQLVWANLT 298 Query: 520 ANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITF 579 A + ++ G E + + D++ KQ EA ++ DS+ E V+ D +I Sbjct: 299 AALMRDEGGRPEYFILVVEDISARKQSEEA----QQLALTVFDSMLEGVIITDHHRRILA 354 Query: 580 MNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSG 639 +N +++ + E LG L T + I+ + E ++ R G Sbjct: 355 VNAAFGEITRYPVEALLGRTP--PLWRTAHQDAAFYRRIWRQLLASGRWEGELWHRKRDG 412 Query: 640 GSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQ 699 + + SI+ + G V V D+++ + QL A +D LT L NR + Sbjct: 413 TPFPLWLSISCVRDEQGRPRQYVFVFNDISQLKDSQEQLERLAHYDPLTGLPNRHLALAR 472 Query: 700 LRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLAR 759 L L+ A++FIDLDRFK +NDS GH AGD LL +A + LR D LAR Sbjct: 473 LEHALERARRHAFPLAVMFIDLDRFKTINDSLGHQAGDELLVAIAQRLHQRLRQEDTLAR 532 Query: 760 LGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAA 819 LGGDEF +++ + V+ IA ++ V+ G VGAS GI+L + A+ Sbjct: 533 LGGDEFLVVIEEAPVQQVASIAHALLKVVDQPFGFSGGGEAYVGASIGISLYPGDGRSAS 592 Query: 820 EVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVA 879 E++ AD A Y +K G Y A +ER +M + R ++ + ++ + Sbjct: 593 ELIRNADAAMYLAKAQGSNAYRFYTESLTRAANERLSMETSLR-RALRCEEFVLHYQPLV 651 Query: 880 SPRIPEARNLWLISLKLWSCEGE-IIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV 938 + R L L W GE ++ F + L L V HE +Q + Sbjct: 652 --ELASGRVLGAEVLVRWQPPGEALVPPSRFIPLAEETGLIVPLGDWVLHEACRQGKAWL 709 Query: 939 -ASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SV 993 A + +++ LS LV + + L+ S LPP L L + A+++ AE ++ Sbjct: 710 DAGLPLLLAVNLSPRQFLRHDLVGQVRKALQGSGLPPAQLELELTEGALMEQAEQAVKTL 769 Query: 994 QKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHA 1053 L+ G + + G LK D L +D ++ + D ++T I Sbjct: 770 HALKRLGVSLAIDDFGTGYSSLAYLKRFPLDKLKIDRSFVRDLPRDSSDAEIVTTIIAMV 829 Query: 1054 QRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 + L ++ +A V P + L +G D G + + P + Sbjct: 830 RNLKLEALAEGVETPQQLAFLRQLGCDSGQGYLFSPPLPAEAF 872 >UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=cellular organisms RepID=Q31GH8_THICR Length = 1466 Score = 731 bits (1888), Expect = 0.0, Method: Composition-based stats. Identities = 152/699 (21%), Positives = 286/699 (40%), Gaps = 24/699 (3%) Query: 406 YFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFS----WDKRMFEL 461 + + E K E Q+ ++R+ + I+++ L P+ S ++E+ Sbjct: 764 FALNDFYHAKERKIIEASRQEALDRLQKIADRLPGVIYQFRLMPDGTSSFPFASDALYEI 823 Query: 462 YEIPPH-IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVK-DGIRHIRAL 519 Y + P + + +E + PED +K I +S + +P+ E+R+ K D +R + Sbjct: 824 YRVKPEDVTEDSSKVFEVIHPEDVDDVQKSIEESAEHLTPWYQEYRVRFKNDDVRWLSGN 883 Query: 520 ANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITF 579 A +G + G D+++ K+ + E + E ++ D KI Sbjct: 884 AMPEKQPDGSIL-WHGFITDISQHKKTEAQI----ELASKVFEQSREGIMITDSNQKILM 938 Query: 580 MNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSG 639 +N ++SG++ EE LG + + + +N++ + + + ++ ++G Sbjct: 939 VNEAFSEISGYSVEETLGKTPRML--ASGRHSREFYQNVWKSIKEKGHWQGEIWNRRKNG 996 Query: 640 GSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQ 699 + SI+ G+ V + D+++ ++ ++ + A +D LT L NR + Sbjct: 997 EIFPEWLSISRGLDTSGNVTEYVGIFNDISKVKESEEKIKHLAHYDPLTGLVNRELLMDR 1056 Query: 700 LRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLAR 759 L + T + + AL+FIDLD FK VND+ GH GD LL E+ +L +LR D +AR Sbjct: 1057 LNHSISTADRNNTPLALLFIDLDHFKNVNDTLGHQVGDQLLIEVGQRILKILRDEDTIAR 1116 Query: 760 LGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAA 819 GGDEF ++LPD A +A +I+ +++D + + S GI + + A Sbjct: 1117 QGGDEFIVVLPDTGENGAVHVAEKILESISDQ-LNLKPYKLFITPSIGIAVYPQDGKDAD 1175 Query: 820 EVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVA 879 ++ AD A Y +KN GR + + A S + + + + Q + Sbjct: 1176 SLLKNADTAMYQAKNDGRNVYRFFTMEMQAHSSRIMQIESALRV-ALFDQQFELYYQPQT 1234 Query: 880 SPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV 938 + + + +L W E + Q F A+ V +Q Sbjct: 1235 CAK--SGSIIGVEALIRWNHPEMGPVSPQEFIPVAEQSGQILAIGWWVLRTAIRQIKIWS 1292 Query: 939 AS--KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES---- 992 I +++ LS L +++ LE + P L L + + + E+ Sbjct: 1293 EHGKPCIKVAVNLSAVQFRYEDLPKQVMKILEEEGVSPEFLELELTESVAMANPEAVIEM 1352 Query: 993 VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGH 1052 + KL G ++ + G + LK L +D ++ + D +I I Sbjct: 1353 MDKLVGHGIKMSIDDFGTGYSSLSYLKRFKVSKLKIDQSFIRDLAVDSDDRSIIEAIISL 1412 Query: 1053 AQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQ 1091 ++ LG+KTIA V +D L D I G + A Sbjct: 1413 SKALGLKTIAEGVETQAQLDFLQEKQCDEIQGFYYSKAL 1451 Score = 145 bits (367), Expect = 8e-33, Method: Composition-based stats. Identities = 55/324 (16%), Positives = 131/324 (40%), Gaps = 13/324 (4%) Query: 257 LATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERK--------HISESETHFRNAM 308 L L + W+ + I + + ER +E+E + Sbjct: 297 LDESTKSLNDLVFWIVLVSFSALFLIGIAFLIVLKKERDLQVLERYAEKTEAEKVLQKFY 356 Query: 309 EYSAIGMALVG-TEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLI 367 E IGMA++ +W++ N L + L YS ++L +F ++ P+DL + Q+ + Sbjct: 357 ELPFIGMAILDAQHDKWIRFNDRLPKILRYSSQDLAQKSFNEIIHPKDLAEVNAQLTDIE 416 Query: 368 SGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQL 427 SG+ ++ E + +V+ + V VR +G Y++ ++D+ ELK ++N + Sbjct: 417 SGKSEGFTTELHLLASDDSIVFGTINVKCVRGENGRVQYYLMTVQDVTELKHLAELNIEH 476 Query: 428 MERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHA 487 ++ +W + + + + + + + V Sbjct: 477 QNQLNALVHTIPDLVWLKDTEGLYLACNPSFERFFGAKEADIIGKTDY-DFVDKALADFF 535 Query: 488 EKVIRDSLQSRSPFKLEFRITVKDGIRH--IRALANRVLNKEGEVERLLGINMDMTEVKQ 545 + +++ + + E +T + + + N+EG+V ++G+ D+++ K+ Sbjct: 536 RENDCNAMAAEESIENEEWLTFSENGYRGLFSTIKTPMKNEEGQVIGVVGVARDISKRKE 595 Query: 546 LNEALFQEKERLHITLDSIGEAVV 569 +EA + +L+ ++ EA++ Sbjct: 596 -DEAQLERLTKLYSAMNHTNEAII 618 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 61/311 (19%), Positives = 119/311 (38%), Gaps = 15/311 (4%) Query: 387 VVW-ALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEW 445 V W L++ S + L + + D+ L+R + + + E IG+ Sbjct: 308 VFWIVLVSFSALFLIGIAFLIVLKKERDLQVLERYA-EKTEAEKVLQKFYELPFIGMAIL 366 Query: 446 ELKPNI-FSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSP-FKL 503 + + + ++ R+ ++ + + E + P+D + D +S F Sbjct: 367 DAQHDKWIRFNDRLPKILRYSSQDLAQ-KSFNEIIHPKDLAEVNAQLTDIESGKSEGFTT 425 Query: 504 EFRITVKDGIRHIRAL-ANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLD 562 E + D + V + G V+ L D+TE+K L E + + +L+ + Sbjct: 426 ELHLLASDDSIVFGTINVKCVRGENGRVQYYLMTVQDVTELKHLAELNIEHQNQLNALVH 485 Query: 563 SIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSAD 622 +I + V D NP E+ G + + +G + D EN +A Sbjct: 486 TIPDLVWLKDTEGLYLACNPSFERFFGAKEADIIGKTDYDFVDKALAD--FFRENDCNAM 543 Query: 623 TSRSAIEQDVVLHCRSGGSYDVHYSI-TPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYS 681 + +IE + L G + +I TP+ +G IG V V +D+++ ++ QL Sbjct: 544 AAEESIENEEWLTFSENGYRGLFSTIKTPMKNEEGQVIGVVGVARDISKRKEDEAQLER- 602 Query: 682 ASHDALTHLAN 692 LT L + Sbjct: 603 -----LTKLYS 608 Score = 82.6 bits (203), Expect = 9e-14, Method: Composition-based stats. Identities = 58/447 (12%), Positives = 137/447 (30%), Gaps = 73/447 (16%) Query: 299 ESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNK 358 E + + + L TEG +L N + +F G + ++ G T + Sbjct: 475 EHQNQLNALVHTIPDLVWLKDTEGLYLACNPSFERFFGAKEADIIGKTDYDFVDKALADF 534 Query: 359 DLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELK 418 + ++ E + + E ++ NG + +++ +G + + DI++ K Sbjct: 535 FRENDCNAMAAEESIENEEWLTFSENGYRGLFSTIKTPMKNEEGQVIGVVGVARDISKRK 594 Query: 419 RTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFEL----YEIPPHIKPNWQV 474 E ++L + + N I + + ++ E+ + Sbjct: 595 EDEAQLERLTKLYSAMNHTNEAII----RSTDQLTLFSKVCEIAVREGGMKMAWIGTIDK 650 Query: 475 WYECVLP--------EDRQHAEKVIRDSLQSRSP------------FKLEFRITVKDGIR 514 V P E E I ++ ++ + +F+ Sbjct: 651 ETNLVHPVVRFGKNSEYLDGLEISIDETAETGQGPTALAIRQDQPYWCQDFQADSHTQPW 710 Query: 515 H-------IRALANRVLNKEGEVERLLGINMD---------------------------- 539 H ++ A+ L++ EV L + D Sbjct: 711 HERAKRFGWQSSASVPLHQNSEVIGTLNLYSDRKEAFDEPIQHLLLEMAIDIGFALNDFY 770 Query: 540 -MTEVKQLNEALFQEKERLHITLDSIGEAVV----CIDMAMKITFMNPVAEKMSGWTQEE 594 E K + + + +RL D + + D F + ++ E+ Sbjct: 771 HAKERKIIEASRQEALDRLQKIADRLPGVIYQFRLMPDGTSSFPFASDALYEIYRVKPED 830 Query: 595 ALGVP--LLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLS 652 + V+H D+ + ++I + + Q+ + ++ + + P Sbjct: 831 VTEDSSKVFEVIHPEDVDD--VQKSIEESAEHLTPWYQEYRVRFKNDDVRWLSGNAMPEK 888 Query: 653 TLDGSNIGSVLVIQDVTESRKMLRQLS 679 DGS + I D+++ +K Q+ Sbjct: 889 QPDGSIL-WHGFITDISQHKKTEAQIE 914 Score = 81.8 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 57/143 (39%), Gaps = 1/143 (0%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 ++ K E S G+ + + + L N+A + GYS EE G T + L Sbjct: 904 SQHKKTEAQIELASKVFEQSREGIMITDSNQKILMVNEAFSEISGYSVEETLGKTPRMLA 963 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 + Q V K I E + E +NG++ L++S T G ++ Sbjct: 964 SGRHSREFYQNVWKSIK-EKGHWQGEIWNRRKNGEIFPEWLSISRGLDTSGNVTEYVGIF 1022 Query: 412 EDINELKRTEQVNQQLMERITLA 434 DI+++K +E+ + L L Sbjct: 1023 NDISKVKESEEKIKHLAHYDPLT 1045 Score = 79.1 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 62/370 (16%), Positives = 127/370 (34%), Gaps = 40/370 (10%) Query: 271 LPFLLILLPANIMTMVMYAFRAERKHI-----SESETHFRNAMEYSAIGMALVG--TEGQ 323 + LL+ + +I + + A+ + I E+ + + + +G Sbjct: 751 IQHLLLEMAIDIGFALNDFYHAKERKIIEASRQEALDRLQKIADRLPGVIYQFRLMPDGT 810 Query: 324 --WLQTNKALCQFLGYSQEELR--GLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKR 379 + + AL + E++ ++ PED++ + +E+ Y E R Sbjct: 811 SSFPFASDALYEIYRVKPEDVTEDSSKVFEVIHPEDVDDVQKSIEESAEHLTPWYQ-EYR 869 Query: 380 YYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGG 439 +N DV W + DG+ L+ I DI++ K+TE + + E Sbjct: 870 VRFKNDDVRWLSGNAMPEKQPDGSILW-HGFITDISQHKKTEAQIELASK----VFEQSR 924 Query: 440 IGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRS 499 GI + I ++ E+ R+ + + S++ + Sbjct: 925 EGIMITDSNQKILMVNEAFSEISGYSVEETLGKTPRMLASGRHSRE-FYQNVWKSIKEKG 983 Query: 500 PFKLEFRITVKDGIRHIRALA-NRVLNKEGEVERLLGINMDMTEVKQLNEALFQ------ 552 ++ E K+G L+ +R L+ G V +GI D+++VK+ E + Sbjct: 984 HWQGEIWNRRKNGEIFPEWLSISRGLDTSGNVTEYVGIFNDISKVKESEEKIKHLAHYDP 1043 Query: 553 -----EKERLHITLDSI---------GEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGV 598 +E L L+ A++ ID+ +N G +G Sbjct: 1044 LTGLVNRELLMDRLNHSISTADRNNTPLALLFIDLD-HFKNVNDTLGHQVGDQLLIEVGQ 1102 Query: 599 PLLTVLHITF 608 +L +L Sbjct: 1103 RILKILRDED 1112 >UniRef50_B8GT56 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Chromatiales RepID=B8GT56_THISH Length = 958 Score = 731 bits (1887), Expect = 0.0, Method: Composition-based stats. Identities = 250/893 (27%), Positives = 405/893 (45%), Gaps = 62/893 (6%) Query: 259 TPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAI----- 313 +S P L L+ P + M+ RK E + + A+ Sbjct: 66 QEEMAALSVEPHLNLALVADPQGQVLGSMHRADQVRKAAELLEERLLSQWQDEAVEWLKA 125 Query: 314 ------GMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLI 367 G + +G L LG ELR L DL + Q L+ Sbjct: 126 PDRITSGTVQISRDGTTLLG--LYPLVLGSEPGELRPSQVGLLVVQADLGRFQQMARHLV 183 Query: 368 SGEINTYS------------MEKRYY-----------NRNGDVVWALLAVSLVRHTDGTP 404 + T+ + R R G L A + + D Sbjct: 184 ERQTLTFVGVLLLVALLGWFLSHRLVTRRMDRLLQTTRRLGQG--DLDARTWLSGRDELA 241 Query: 405 LYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI 464 +++ + + ER+ A G +G WEW+++ W +++ ++ + Sbjct: 242 RLGQDFDRMAEQIQAARKALEDNAERLERAQAMGQMGDWEWDVQTGTLHWSPQLYCIFGV 301 Query: 465 PPH-IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD-GIRHIRALANR 522 P P++ + + V PEDR + + S P+ L+ RI D IR I++ Sbjct: 302 SPESFTPSYDGYLDLVHPEDRPALLATVEAARSSGEPYTLDHRIVRPDGSIRVIQSQGEA 361 Query: 523 VLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNP 582 + + +G + +L G +D+TE KQ ALF+ KER +TL SIG+AV+ D +T++NP Sbjct: 362 LRDADGRIIKLRGTGLDVTERKQAEAALFEAKERALVTLHSIGDAVITTDAQGIVTYLNP 421 Query: 583 VAEKMSGWTQEEALGVPLLTVLHITFGDN-GPLMENIYSADTSRS--AIEQDVVLHCRSG 639 VAE ++GW EA G PL V I P + + + A+ VL R G Sbjct: 422 VAEGLTGWRSSEATGQPLTKVFRIFNEFTLQPTQDPVKTCLEEGRIVALANHTVLMSRDG 481 Query: 640 GSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQ 699 + + S P+ +G +G VLV DV+++R+M RQLS+ A+HDALT L NR FE++ Sbjct: 482 ATRAIEDSAAPIRDRNGLILGVVLVFHDVSKTRQMARQLSWQATHDALTGLFNRYEFEQR 541 Query: 700 LRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLAR 759 L L HA++++DLD+FK VND+ GH+AGD LL++LA L++ +R SD LAR Sbjct: 542 LAQALAQARDRLAHHAVLYMDLDQFKVVNDTCGHSAGDELLKQLAYLLMGKVRESDTLAR 601 Query: 760 LGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAA 819 LGGDEFG+LL +C ++ AR IA + V D+ F W+G+ ++G S G+ +I D N A Sbjct: 602 LGGDEFGVLLENCPLDKAREIAQELRQTVRDFRFSWKGKSFQIGISIGLVMISDGNLDLA 661 Query: 820 EVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMS-LDEQWRMIKENQLMMLAHGV 878 EV+S AD+ACYA+K+ GR R+ VY + A M ++ + ++ ++ + Sbjct: 662 EVLSAADMACYAAKDLGRDRIHVYHAEDADLQRRHVEMQAINRITDALTHDRFVLYTQRI 721 Query: 879 ASPRI---PEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAA 935 + + I L++ +G+++ F + L A+DR V FF A Sbjct: 722 VATGAAGPDDGGEHMEILLRMVDEKGDLVPPGAFIPAAERYDLMPAIDRWVIRRFFSTMA 781 Query: 936 KAVASK-----------GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAE 984 + + + G ++ +S A ++ T + + EQLE +PP + I Sbjct: 782 QHIREECGVDGSGGSASGCLYAINISGASINDETFLGFVTEQLETHRIPPTAICFEITET 841 Query: 985 AILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNL 1040 A + + + +LR GCR L G + F LK DYL +DG L ++ + Sbjct: 842 AAIANLTRAMNLINELRKRGCRFSLDDFGTGVSSFGYLKNLPVDYLKIDGSLVKDIVSDP 901 Query: 1041 MDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPL 1093 +D ++ I Q +G+ T+A V ++ +L +GVD G I +PL Sbjct: 902 IDRAMVDAINRIGQVMGIHTVAEFVENDEILASLRELGVDYAQGYGIDRPKPL 954 >UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncultured bacterium RepID=C5JAR6_9BACT Length = 922 Score = 731 bits (1887), Expect = 0.0, Method: Composition-based stats. Identities = 174/817 (21%), Positives = 323/817 (39%), Gaps = 31/817 (3%) Query: 290 FRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGY-SQEELRGLTFQ 348 R + ESE FR +E + + LV G + N+ +G + +L G + Sbjct: 105 RRNAEVRLRESEERFRRLVELAPDAI-LVHQGGTIVYANRQAQIMMGAPTPTDLIGRSII 163 Query: 349 QLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFI 408 ++ P + ++++ L GE +E R +G V + + + G Sbjct: 164 EIIDPACHDLVAKRLKLLARGEQLPL-VEMRLVRLDGGQVEVESTMGMTTY--GGHRAMQ 220 Query: 409 AQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHI 468 + DI+ K+ E +Q + + + ++ + I SW++ +Y Sbjct: 221 SVWRDISARKQAEAASQAAKDHFLAFARSTPDALIAFDEEGRIVSWNEGAEAVYGFRQDE 280 Query: 469 ---KPNWQVWYECVLPEDRQHAEKVIRDSLQS---RSPFKLEFRITVKDGIRHIRALANR 522 P ++ E + +++ +D + P + + + R Sbjct: 281 ILGSPLSRLIPERYHAINAAWVKRMAKDRGRHNFTGKPIEA-HGLRKSGEEFPVEYSVGR 339 Query: 523 VLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNP 582 + D+++ KQ E L L ++ VV + I ++NP Sbjct: 340 WREAGRNFFSVAA--RDISKRKQSEEKL----RHLSQAVEQSPADVVITNAEGIIQYVNP 393 Query: 583 VAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSY 642 +++G+ +E +G + + L ++++ ++ +++ + G + Sbjct: 394 RFSQVTGYASKEVIGKKPSILK--SGRTPAALYDSLWETISAGKEWRGELMNRKKDGSLF 451 Query: 643 DVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRI 702 H I+P+ G + V +D++ ++ +L A++DALT L NR +L+ Sbjct: 452 WQHAIISPIRDNSGVITHYISVKEDISIRKEYEERLVRQANYDALTGLPNRILAMDRLKQ 511 Query: 703 LLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGG 762 + +++ AL+ +DLD FK VND+ GHAAGD LL+E A ++ LR D +ARLGG Sbjct: 512 AIAQAQRYNRKVALMLLDLDDFKKVNDTLGHAAGDLLLKEAALRLVDCLREGDTVARLGG 571 Query: 763 DEFGLLLPD-CNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEV 821 DEF LLLPD + SA +A +I++A N F G + S GI + D+ + Sbjct: 572 DEFVLLLPDLTDTSSAEVVAEKILAACNQ-PFDVGGHEAYIAGSIGIAIFPDDERDPILL 630 Query: 822 MSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASP 881 M AD A Y SK G+G + P+ A E M + I+ N++ + + Sbjct: 631 MRNADAAMYRSKREGKGVFRYFTPEMNARALEHMRME-SQLRHAIERNEMKVHYQPLVD- 688 Query: 882 RIPEARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS 940 R + +L WS + + F + L ++ V + AA Sbjct: 689 -SGTGRLVGAEALLRWSNPVLGEVSPEQFIPLAEETGLILSIGAWVLRTACRDAASWQRP 747 Query: 941 KG-ISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQK 995 I +++ +S TLV + L S LPP L L + +L+H + +Q+ Sbjct: 748 DHEIFVAVNISGKQFQKRTLVEIVRSSLNESGLPPACLELELTESVLLEHTQETLSIIQE 807 Query: 996 LRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQR 1055 L G + G + L+ D L +D ++ N D L+ I A Sbjct: 808 LESLGVGFAIDDFGTGFSSISYLRRFPFDTLKIDRSFIKDLGDNEGDADLVKSIIAMANS 867 Query: 1056 LGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQP 1092 + +K + V + L G + G + + P Sbjct: 868 MSLKVVGEGVETHGQREFLRLSGCHIAQGWLYSRPIP 904 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 64/385 (16%), Positives = 134/385 (34%), Gaps = 31/385 (8%) Query: 314 GMALVGTEGQWLQTNKALCQFLGYSQEELR-GLTFQQLT-----WPEDLNKDLQ---QVE 364 G+++ + + N + + + G F+ E + D++ + Sbjct: 2 GISVFDADLNMVYFNTQFLKLYKFPPGLAQPGTPFETFIRYNAEHGEYGDCDIETEVRFR 61 Query: 365 KLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPL---YFIAQIEDINELKRTE 421 + + +++E+ +G V+ G+PL FI DI+E + E Sbjct: 62 VERARKFEAHTVERT--TPDGRVLEI----------QGSPLPGGGFITTYTDISERRNAE 109 Query: 422 QVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLP 481 ++ ER E I + I +++ + P + E + P Sbjct: 110 VRLRESEERFRRLVELAPDAILVHQGGT-IVYANRQAQIMMGAPTPTDLIGRSIIEIIDP 168 Query: 482 EDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMT 541 K ++ + +E R+ DG + + + G + + D++ Sbjct: 169 ACHDLVAKRLKLLARGEQLPLVEMRLVRLDG-GQVEVESTMGMTTYGGHRAMQSVWRDIS 227 Query: 542 EVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLL 601 KQ A K+ S +A++ D +I N AE + G+ Q+E LG PL Sbjct: 228 ARKQAEAASQAAKDHFLAFARSTPDALIAFDEEGRIVSWNEGAEAVYGFRQDEILGSPLS 287 Query: 602 TVLHITFGDNGPLMENIYSADTSRSAIEQ---DVVLHCRSGGSYDVHYSITPLSTLDGSN 658 ++ + + D R + +SG + V YS+ G N Sbjct: 288 RLIPERYHAINAAWVKRMAKDRGRHNFTGKPIEAHGLRKSGEEFPVEYSVGRWR-EAGRN 346 Query: 659 IGSVLVIQDVTESRKMLRQLSYSAS 683 SV +D+++ ++ +L + + Sbjct: 347 FFSVA-ARDISKRKQSEEKLRHLSQ 370 Score = 83.0 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 37/259 (14%), Positives = 91/259 (35%), Gaps = 19/259 (7%) Query: 440 IGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECV-----LPEDRQ-HAEKVIRD 493 +GI ++ N+ ++ + +LY+ PP + + + E E +R Sbjct: 1 MGISVFDADLNMVYFNTQFLKLYKFPPGLAQPGTPFETFIRYNAEHGEYGDCDIETEVRF 60 Query: 494 SLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQE 553 ++ F+ R + + + + D++E + L + Sbjct: 61 RVERARKFEAHTVERTTPDGRVLEIQGSPLP-----GGGFITTYTDISERRNAEVRLRES 115 Query: 554 KERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGW-TQEEALGVPLLTVLHITFGDNG 612 +ER ++ +A++ I + N A+ M G T + +G ++ ++ D Sbjct: 116 EERFRRLVELAPDAILV-HQGGTIVYANRQAQIMMGAPTPTDLIGRSIIEIIDPACHDLV 174 Query: 613 PLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESR 672 + + + ++ L GG +V ++ T G + V +D++ + Sbjct: 175 AKRLKLLARGEQLPLV--EMRLVRLDGGQVEVESTMG--MTTYGGHRAMQSVWRDISARK 230 Query: 673 KMLRQLSYSASHDALTHLA 691 + + A+ D A Sbjct: 231 QAEA--ASQAAKDHFLAFA 247 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 39/293 (13%), Positives = 98/293 (33%), Gaps = 18/293 (6%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + A + ++ HF + + EG+ + N+ G+ Q+E+ G Sbjct: 226 ISARKQAEAASQAAKDHFLAFARSTPDALIAFDEEGRIVSWNEGAEAVYGFRQDEILGSP 285 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINT----YSMEKRYYNRNGDVVWALLAVSLVRHTDG 402 +L + V+++ +E ++G+ +V R Sbjct: 286 LSRLIPERYHAINAAWVKRMAKDRGRHNFTGKPIEAHGLRKSGEEFPVEYSVGRWREAGR 345 Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELY 462 +F DI++ K++E+ ++ A E + + I + R ++ Sbjct: 346 N--FFSVAARDISKRKQSEEKL----RHLSQAVEQSPADVVITNAEGIIQYVNPRFSQVT 399 Query: 463 EI--PPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHI-RAL 519 I + P + +++ + ++ E KDG A+ Sbjct: 400 GYASKEVIGKKPSILKSGRTP---AALYDSLWETISAGKEWRGELMNRKKDGSLFWQHAI 456 Query: 520 ANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCID 572 + + + G + + + D++ K+ E L ++ L + ++ +D Sbjct: 457 ISPIRDNSGVITHYISVKEDISIRKEYEERLVRQANY--DALTGLPNRILAMD 507 >UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Bacteria RepID=B2JCW5_BURP8 Length = 1040 Score = 730 bits (1886), Expect = 0.0, Method: Composition-based stats. Identities = 181/866 (20%), Positives = 342/866 (39%), Gaps = 40/866 (4%) Query: 253 DPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAE---RKHIS------ESETH 303 D +L A + + FL++ + A ++ E R+ + S+ Sbjct: 167 DRALKAALDASMRDSRYAMLFLVVTMLAGSGLLIYTFGARENVAREKLRVARTLHRSDER 226 Query: 304 FRNAMEYSAIGMALVGTEG-QWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQ 362 FR E + M + + ++L N A Q GYS+ E +T + + ++ + Sbjct: 227 FRGLFEQHPVPMYIFDRDTLRFLAVNAAAVQQYGYSESEFLAMTVRAIRPHSEVARLETH 286 Query: 363 VEK--LISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRT 420 +++ + G T + + ++G + A ++ + L+ +A +D+ E Sbjct: 287 LQRSDVTPGGPRTMAGVWHHRRKDGSQISADISYHAMTFMGRPALFVLA--DDVTEQINA 344 Query: 421 EQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFEL--YEIPPH-IKPNWQVWYE 477 E Q+ + + + I+ + + + P I + Sbjct: 345 EAEAQRSNQMLETVIDNIPQRIFWKDKELRYLGCNMAFARDAGLAYPEQVIGKRDEDMPW 404 Query: 478 CVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGIN 537 E + + L E + + R + +G V +LG Sbjct: 405 RAFAEALGRQDTDV--MLSGVPKMNYETDLVIDGVHRTTVTSKLPFTDSDGRVIGVLGSY 462 Query: 538 MDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMK---ITFMNPVAEKMSGWTQEE 594 D+TE K+ + AL + LD+ A++ + + + I ++NP ++++G+ +E Sbjct: 463 TDITERKRADLALRLQSR----ALDASVNAILITEPSKEGNLIEYVNPAFKRITGYDPQE 518 Query: 595 ALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTL 654 +G + + + I A + + + + + G + I P+ Sbjct: 519 VIGQDCRLLQR--DDRDQEGIAAIRQALAANREVSAVLRNYRKDGALFWNQLYIAPVPDA 576 Query: 655 DGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRH 714 DG + VI DVT + QL Y A++D+LT L NR +L+ L H+ Sbjct: 577 DGQTTHHIAVINDVTALIRYQEQLEYQANYDSLTRLPNRNLLRDRLQHALIVAQRHHKGV 636 Query: 715 ALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-N 773 A+VFIDLD FK VNDS GH+ GD LL +A + R+SD +AR GGDEF +++ D + Sbjct: 637 AVVFIDLDGFKNVNDSLGHSVGDRLLSVVADRLARCARASDTVARHGGDEFVIVMTDTVD 696 Query: 774 VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASK 833 +S R+ +++++ +G VG S G +L + A +M +AD+A Y +K Sbjct: 697 EQSLIAWMERVRASISE-PVWLDGTELYVGCSMGASLFPQDGDDAETLMKKADLAMYRAK 755 Query: 834 NGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLIS 893 + GR Y+P+ + R +++N+ ++ I + + + + Sbjct: 756 DMGRNTFQFYQPEMNVSAGA-RLNLERRLRRALRDNEFLLHYQPQVD--IETGQVVGMEA 812 Query: 894 LKLWS-CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQ--AAKAVASKGISISLPLS 950 L W E +I F + L L V E +Q A + +S+ LS Sbjct: 813 LVRWHDPEVGLIPPSQFIPVAEESGLIGPLSEWVLREACRQNKAWQDEGLPPARVSVNLS 872 Query: 951 VAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLS 1006 + +++ LE + L P+ L L + I+ +AE + +L G + + Sbjct: 873 ARQFQQRDIAKLVMQVLEETGLDPQYLELELTESTIMRNAEEAVSMLNELHALGIGLAID 932 Query: 1007 QVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVV 1066 G + LK D L +D +++ + DE + + I A L ++ IA V Sbjct: 933 DFGTGYSSLSYLKRFPVDRLKIDRSFVSDIGESSDDETITSAIIALAHSLNLQVIAEGVE 992 Query: 1067 LPLVMDTLSGIGVDLIYGEVIADAQP 1092 +D L D + G A P Sbjct: 993 TSTQLDFLKERACDEMQGYFFAKPLP 1018 >UniRef50_Q087W4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q087W4_SHEFN Length = 1144 Score = 729 bits (1883), Expect = 0.0, Method: Composition-based stats. Identities = 160/824 (19%), Positives = 326/824 (39%), Gaps = 28/824 (3%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 M + + + SE+ +RN + + G +V +G+ +++N++ GY+ +EL Sbjct: 319 MADRKLIEEQLRRSESTYRNIISTAQDGFVIVSVDGKIIESNQSFADMTGYTLDELFNKP 378 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 + E+ Q + + + ++ ++ ++ G + + +S DG Sbjct: 379 IGDIETSENHQFSTQNI--ITAKQVKAIHYTSQHKHKLGYLFHVEVNISFWDGDDGMFFC 436 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWE-WELKPNIFSWDKRMFELYEIP 465 FI +DI++ EQ + E + ++ ++ W++ +LY Sbjct: 437 FI---KDISQRINAEQKLLLSESKFRHIFENIPSISVQGYDKNRSVIFWNQASEKLYGYT 493 Query: 466 PHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPF-KLEFRITVKDGIRHIRALANRVL 524 ++ + P R+H + + P E + DG ++ ++ Sbjct: 494 KEQALGKKLEDLIIPPPYREHVINNVNAWINEGVPILAEELLLQRADGSNVAVYSSHTLI 553 Query: 525 NKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVA 584 N + I++D++ K+ E L ++ +++ ++ KI ++N Sbjct: 554 NNTDNEAEMYCIDIDLSAQKKAEEQAL----TLSQAIEQSPISMILTNIDSKIEYVNSAF 609 Query: 585 EKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDV 644 EK+SG+ E +G + + L + ++ A ++ A + ++ ++G + Sbjct: 610 EKISGYAASEVIGQSASMLKSGLTPKS--LYKQLWDAISTGHAWQGELQNRKKNGDIFWE 667 Query: 645 HYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILL 704 H I P+ G + + QDVT+ ++ ++ + A +D+LT L NR +L +L Sbjct: 668 HAHIAPIFDNAGVTKHYLALKQDVTQYKQQEEKILHQAHYDSLTGLPNRLLSLDRLSQML 727 Query: 705 QTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDE 764 + + A++F+DLD FK VND+ GH+ GD LL + A + + +R SDV+ RLGGDE Sbjct: 728 KDAHRAKNNVAVLFLDLDDFKKVNDTMGHSVGDELLIQAAVRLKNTIRESDVVGRLGGDE 787 Query: 765 FGLLLPDCNVE-SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMS 823 F ++L + N IA++++ F E R S GI L ++ E++ Sbjct: 788 FIIILSNINEPIEVEIIASKLLEQFYQ-PFRLENRELVSTISIGIALYPLDSEDPKELLR 846 Query: 824 QADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRI 883 QAD A Y SK+ GR Y Q R + ++ +K+ + + I Sbjct: 847 QADSAMYHSKDRGRNTYNFYTHQMNHDMDRRLKIE-EQLRSALKQKEFEVYFQPFVD--I 903 Query: 884 PEARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVA--S 940 + + +L W+ + F L ++ + V F A K + Sbjct: 904 KSRKIIGAEALLRWNNALLGQVTPDEFIPIAEQTGLIVSIGQYVIEVAFATAKKWQQTYN 963 Query: 941 KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQ----KL 996 I++ +S T V+ L QL+ + + L I +L + + Sbjct: 964 PYFKIAINVSPKQFRENTFVDMLNIQLDKHQIHASTIELEITEGVLLSSDAVIDSNLISI 1023 Query: 997 RLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRL 1056 G I + G + L++ + L +D ++ + D L+ L Sbjct: 1024 NDIGVSISMDDFGTGYSSLSYLRSYPFNTLKVDKSFINDITVDPGDLELVGAAIAMGHGL 1083 Query: 1057 GMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQP---LDLLV 1097 + +A V L+ + D G + + P + L+ Sbjct: 1084 NLTVVAEGVETEEQYHLLNALKCDYGQGYLFSKPLPQAAFEALL 1127 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 62/442 (14%), Positives = 162/442 (36%), Gaps = 11/442 (2%) Query: 239 FLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHIS 298 L ++++ + D L +P + + + + +LL + + K++ Sbjct: 145 VLLCLLLMPVADKYDIILTISPTLFTVYTCGTM-LIGLLLKQHQQRQQISQELHHHKNLL 203 Query: 299 ESET-HFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLN 357 E+E ++ ++ + +G +L NKA + L + E+++ T L + + Sbjct: 204 ETEKNLLQSIIDGIPDIIFYKSADGVYLGCNKAFSEALKLNPEDIKHKTDYDLFDRQQAD 263 Query: 358 KDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINEL 417 ++ ++ E + E+ +G + + G + D+ + Sbjct: 264 SFIKADRFVLQ-ENQPWMDEEWITTPDGIAHIFKTHKTPFVDSSGDIQGIVGVSRDMADR 322 Query: 418 KRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYE 477 K E+ ++ G + I ++ ++ N + + Sbjct: 323 KLIEEQLRRSESTYRNIISTAQDGFVIVSVDGKIIESNQSFADMTGYTLDELFN-KPIGD 381 Query: 478 CVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGIN 537 E+ Q + + I + Q ++ + + K + ++ + + +G+ Sbjct: 382 IETSENHQFSTQNIITAKQVKA---IHYTSQHKHKLGYLFHVEVNISFWDGDDGMFFCFI 438 Query: 538 MDMTEVKQLNEALFQEKERLHITLDSIGEAVVC-IDMAMKITFMNPVAEKMSGWTQEEAL 596 D+++ + L + + ++I V D + F N +EK+ G+T+E+AL Sbjct: 439 KDISQRINAEQKLLLSESKFRHIFENIPSISVQGYDKNRSVIFWNQASEKLYGYTKEQAL 498 Query: 597 GVPLLTVLHITFGDNGPLMENIYSADTSR-SAIEQDVVLHCRSGGSYDVHYSITPLSTLD 655 G L ++ I ++ N+ + + ++++L G + V+ S T ++ D Sbjct: 499 GKKLEDLI-IPPPYREHVINNVNAWINEGVPILAEELLLQRADGSNVAVYSSHTLINNTD 557 Query: 656 GSNIGSVLVIQDVTESRKMLRQ 677 + I D++ +K Q Sbjct: 558 NEAEMYCIDI-DLSAQKKAEEQ 578 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 105/267 (39%), Gaps = 14/267 (5%) Query: 416 ELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVW 475 EL + + + + + I+ +K E ++ P + + Sbjct: 195 ELHHHKNLLETEKNLLQSIIDGIPDIIFYKSADGVYLGCNKAFSEALKLNPEDIKHKTDY 254 Query: 476 YECVLPEDRQHAE---KVIRDSLQSRSPFKLEFRITVKDGIRHI-RALANRVLNKEGEVE 531 DRQ A+ K R LQ P+ E IT DGI HI + ++ G+++ Sbjct: 255 DLF----DRQQADSFIKADRFVLQENQPWMDEEWITTPDGIAHIFKTHKTPFVDSSGDIQ 310 Query: 532 RLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWT 591 ++G++ DM + K + E L + + + + + V + + KI N M+G+T Sbjct: 311 GIVGVSRDMADRKLIEEQLRRSESTYRNIISTAQDGFVIVSVDGKIIESNQSFADMTGYT 370 Query: 592 QEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPL 651 +E P+ + T ++ +NI +A + AI + G + V +I+ Sbjct: 371 LDELFNKPIGDI--ETSENHQFSTQNIITAKQVK-AIHYTSQHKHKLGYLFHVEVNISFW 427 Query: 652 STLDGSNIGSVLVIQDVTESRKMLRQL 678 DG I+D+++ ++L Sbjct: 428 DGDDGM---FFCFIKDISQRINAEQKL 451 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 41/143 (28%), Gaps = 2/143 (1%) Query: 542 EVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLL 601 E+ L EK L +D I + + N + E+ Sbjct: 195 ELHHHKNLLETEKNLLQSIIDGIPDIIFYKSADGVYLGCNKAFSEALKLNPEDIKHKTDY 254 Query: 602 TVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGS 661 + D+ ++ + + G ++ TP G G Sbjct: 255 DLFDRQQADS--FIKADRFVLQENQPWMDEEWITTPDGIAHIFKTHKTPFVDSSGDIQGI 312 Query: 662 VLVIQDVTESRKMLRQLSYSASH 684 V V +D+ + + + QL S S Sbjct: 313 VGVSRDMADRKLIEEQLRRSEST 335 >UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=A0L9T5_MAGSM Length = 1275 Score = 726 bits (1874), Expect = 0.0, Method: Composition-based stats. Identities = 161/692 (23%), Positives = 286/692 (41%), Gaps = 22/692 (3%) Query: 417 LKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIK-PNWQVW 475 + + +Q+ + + A IG W W+++ + W K + L + ++ + Sbjct: 575 RAQQLKQLEQIHQDLENAQSVAKIGSWHWDMQKDNLHWSKELVRLLGLEGDTSHASYSTY 634 Query: 476 YECVLPEDRQHAEKVIRDSLQS-RSPFKLEFRITV--KDGIRHIRALANRVLNKEGEVER 532 E + P+DR + + + + F+ + RI + HI AL + G + Sbjct: 635 LELIHPDDRAKINRQMAAVTRGMQDRFEADHRIICHKSGELLHIHALGIVSRDSRGVPSQ 694 Query: 533 LLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQ 592 ++G D+T K E L K D+ GEA+V D IT +NP +++ G+T+ Sbjct: 695 MVGTLQDVTRRKMAEEGLVLAKM----IFDNAGEAIVITDAQGDITDVNPAYQRIMGYTR 750 Query: 593 EEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLS 652 +E +G + + + E +++ S + ++ +SG + +I + Sbjct: 751 DEIVGQNPSILK--SGRHDEQFYEQMWNEMLSEGHWQGEIWDRRKSGEIFPKWLTIDAIR 808 Query: 653 TLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQ 712 G V + D+T+ ++ QL A +D LT L NRA F +L ++ + Sbjct: 809 DEQGVISNFVGLFMDITQQKETEEQLEKLAYYDPLTELPNRALFRDRLEQEMRLSARGGK 868 Query: 713 RHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC 772 L FIDLDRFK VNDS GH GD LL ++A + LR+SD +ARLGGDEF ++LP Sbjct: 869 SLGLFFIDLDRFKYVNDSLGHDKGDDLLIQVAGRIKHHLRTSDTVARLGGDEFTVILPGI 928 Query: 773 N-VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYA 831 IA I+ ++ + F+ +G +G S GI + D+ + AD A Y Sbjct: 929 EQTNDVARIAGAIVKSLGE-VFVLQGHEVFIGGSIGIAMHPDDGEDYETLTKHADTAMYR 987 Query: 832 SKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWL 891 +K GRG + + R ++ + + ++ NQL + + + R + Sbjct: 988 AKEEGRGTYKFFTSDMNEINGRRLSLERALR-QAVECNQLTLHYQPKVDVK--QCRITGM 1044 Query: 892 ISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS--KGISISLP 948 +L W E ++ F + L + V + A + S + +++ Sbjct: 1045 EALVRWNHPEQGLVSPVDFIPIAEETGLIITIGEWVMQQACMDAKRLARSSRHPLQVAIN 1104 Query: 949 LSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRLAGCRIV 1004 LS A LV L L+ S L P LL + I + E + +LR G ++ Sbjct: 1105 LSAKQFQDALLVAKLERSLQQSGLAPELLEVEITESLAMGDVNRTIEQIGELRALGVKVS 1164 Query: 1005 LSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGP 1064 + G + LK + L +D ++ + D +++ I A LG+ +A Sbjct: 1165 IDDFGTGYSSLSYLKKLPLNALKIDKSFIQDLYLDSDDTAIVSSILSMASALGLSVVAEG 1224 Query: 1065 VVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 V + L I G + P + Sbjct: 1225 VENQAQIHFLCEKECPTIQGYFFSKPLPFEAF 1256 Score = 89.6 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 45/278 (16%), Positives = 99/278 (35%), Gaps = 8/278 (2%) Query: 275 LILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQF 334 LI L A + Y + + K + + NA + IG + L +K L + Sbjct: 561 LISLLAQWVGWEKYRAQ-QLKQLEQIHQDLENAQSVAKIGSWHWDMQKDNLHWSKELVRL 619 Query: 335 LGYSQEELRGL--TFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYY-NRNGDVVWAL 391 LG + T+ +L P+D K +Q+ + G + + + R +++G+++ Sbjct: 620 LGLEGDTSHASYSTYLELIHPDDRAKINRQMAAVTRGMQDRFEADHRIICHKSGELLHIH 679 Query: 392 LAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNI 451 + R + G P + ++D+ K E+ + + G I + + +I Sbjct: 680 ALGIVSRDSRGVPSQMVGTLQDVTRRKMAEEGLVLA----KMIFDNAGEAIVITDAQGDI 735 Query: 452 FSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD 511 + + D Q E++ + L + Sbjct: 736 TDVNPAYQRIMGYTRDEIVGQNPSILKSGRHDEQFYEQMWNEMLSEGHWQGEIWDRRKSG 795 Query: 512 GIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEA 549 I + + +++G + +G+ MD+T+ K+ E Sbjct: 796 EIFPKWLTIDAIRDEQGVISNFVGLFMDITQQKETEEQ 833 Score = 83.4 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 55/143 (38%), Gaps = 1/143 (0%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 RK E + + + + + +G N A + +GY+++E+ G L Sbjct: 703 TRRKMAEEGLVLAKMIFDNAGEAIVITDAQGDITDVNPAYQRIMGYTRDEIVGQNPSILK 762 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 + +Q+ + E + + E ++G++ L + +R G F+ Sbjct: 763 SGRHDEQFYEQMWNEMLSEGH-WQGEIWDRRKSGEIFPKWLTIDAIRDEQGVISNFVGLF 821 Query: 412 EDINELKRTEQVNQQLMERITLA 434 DI + K TE+ ++L L Sbjct: 822 MDITQQKETEEQLEKLAYYDPLT 844 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 47/339 (13%), Positives = 106/339 (31%), Gaps = 34/339 (10%) Query: 354 EDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIED 413 +++ + +L++ + E R+ + + V + + + Sbjct: 394 DEIGAAVSAYNQLLTNLVVAQGNESRFI--DSLTRMHAITVRTEWDSQRKIQEILEMGGE 451 Query: 414 INELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQ 473 I E++ + G + E L + FE+ +I P + + Sbjct: 452 ILEMESAIVTHVD-----------GQMCQVEHLLGQDSL------FEMGQIQPLEQSFCK 494 Query: 474 VWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGI--RHIRALA--NRVLNKEG- 528 + E + + + + F +E I + R AL+ ++V +G Sbjct: 495 QVIDAGHAEAIYRIKGSLLEEHPVHTQFGVESFIGTPLYLGDRFYGALSYYSKVPRTKGF 554 Query: 529 --EVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIG----EAVVCIDMAMKITFMNP 582 L+ + ++ ++ E++H L++ DM + Sbjct: 555 SFHDRSLISLLAQWVGWEKYRAQQLKQLEQIHQDLENAQSVAKIGSWHWDMQKDNLHWSK 614 Query: 583 VAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTS--RSAIEQDVVLHC-RSG 639 ++ G + + T L + D+ + +A T + E D + C +SG Sbjct: 615 ELVRLLGLEGDTSHA-SYSTYLELIHPDDRAKINRQMAAVTRGMQDRFEADHRIICHKSG 673 Query: 640 GSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQL 678 +H G V +QDVT + L Sbjct: 674 ELLHIHALGIVSRDSRGVPSQMVGTLQDVTRRKMAEEGL 712 >UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=16 Tax=Proteobacteria RepID=A1RPJ9_SHESW Length = 1511 Score = 725 bits (1873), Expect = 0.0, Method: Composition-based stats. Identities = 166/691 (24%), Positives = 298/691 (43%), Gaps = 28/691 (4%) Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPN 471 + + + E + ER+ LA A G G+W+W +K N + H Sbjct: 820 QKRQQQREFETSIRASEERLKLALWASGDGMWDWNIKENKVYRTNMDASVSHWSSH---- 875 Query: 472 WQVWYECVLPEDRQHAEKVIRDSLQSRSPF-KLEFRITVKDGIRHIRALANRVLNKEG-- 528 + +E + PEDR+ + + + LQ R+PF ++E+RI G +V+ + Sbjct: 876 -NLLHENMHPEDREKFKYELAEHLQGRTPFFEIEYRIEGAFGKWIWILDRGKVVETDAHM 934 Query: 529 EVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMS 588 + R+ G N ++T K + L + L+S+ EAVV + KI +NP ++ Sbjct: 935 QPMRMTGTNRNITSRKLIENELVLSSQ----VLNSMNEAVVVAGLDYKIRSVNPAFSAIT 990 Query: 589 GWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSI 648 G+++ + L +H+ + L +I ++ + + + V I Sbjct: 991 GYSERQITDKYL---VHLAYKQQRELFNSIEQQLLRHKHWVGEIWIRNKQRKAILVWLEI 1047 Query: 649 TPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVN 708 + + G V V D+TE +K + L + AS D LT L NR F+ +L + + Sbjct: 1048 NQVIDIKGETSHFVAVFTDITERKKAEQDLRFLASFDTLTGLPNRTLFQDRLNHAITQAH 1107 Query: 709 STHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLL 768 + AL+F+DLDRFK +NDS GH GD LL+ A + + +R D +ARLGGDEF ++ Sbjct: 1108 RANNIVALLFLDLDRFKHINDSMGHHVGDLLLKAAAKRLQNAVREGDTVARLGGDEFTII 1167 Query: 769 LPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADI 827 L ++A I+ +++ A F+ E + + S GI+L ++ A ++ AD Sbjct: 1168 LEGVAKTKAATLISEKVLRAF-QTPFLLEDKSLTISTSIGISLYPNDADNADSLIKFADT 1226 Query: 828 ACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEAR 887 A Y +K+ GR Y + + + + + I N+L ++ S R + Sbjct: 1227 AMYHAKSLGRNNFQFYTHKLNEIATRHVLLEAGLK-QAIHRNELSLVYQPKFSLR--DGS 1283 Query: 888 NLWLISLKLWSC-EGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA--VASKGIS 944 L +L W E I F + + + + V + QQ A+ + IS Sbjct: 1284 LTGLEALLRWHHTELGPISPVEFIPLAEETGIINQIGHWVINHACQQLAEWNALGFNNIS 1343 Query: 945 ISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAG 1000 +++ LS L A +++ + L S LP + L L + I+ + + + KL+ G Sbjct: 1344 MAVNLSARQLK-ADIISTIEVALAVSGLPAQSLELELTESMIMGNPQDSVSILSKLKALG 1402 Query: 1001 CRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKT 1060 I + G + LK D L +D E ++ + D + + I A L + Sbjct: 1403 LTIAIDDFGTGYSSLSYLKRFPIDTLKIDREFVRDITNDPDDAAITSAIIALAHSLELNV 1462 Query: 1061 IAGPVVLPLVMDTLSGIGVDLIYGEVIADAQ 1091 +A V ++ L G D + G +++ Sbjct: 1463 VAEGVETQAQLNFLGLQGCDEVQGFLLSKPL 1493 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 51/296 (17%), Positives = 104/296 (35%), Gaps = 25/296 (8%) Query: 268 MPWLPFLLILLPANIMTMVMYAFRAERKHISE-------SETHFRNAMEYSAIGMALVGT 320 P+ L LL ++ ++ + +R+ E SE + A+ S GM Sbjct: 796 TPFAYTLYCLLAIGLLIWGLHWRKQKRQQQREFETSIRASEERLKLALWASGDGMWDWNI 855 Query: 321 -EGQWLQTN--KALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSME 377 E + +TN ++ + S L PED K ++ + + G + +E Sbjct: 856 KENKVYRTNMDASVSHW---SSHNLLHEN----MHPEDREKFKYELAEHLQGRTPFFEIE 908 Query: 378 KRYYNRNGDVVWALLAVSLVR-HTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANE 436 R G +W L +V P+ +I K E + + NE Sbjct: 909 YRIEGAFGKWIWILDRGKVVETDAHMQPMRMTGTNRNITSRKLIENELVLSSQVLNSMNE 968 Query: 437 AGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQ 496 A + +++++ S + + + + + R+ + + L+ Sbjct: 969 AVVVAGLDYKIR----SVNPAFSAITGYSER-QITDKYLVHLAYKQQRELFNSIEQQLLR 1023 Query: 497 SRSPFKLEFRITVKDGIRHIRAL-ANRVLNKEGEVERLLGINMDMTEVKQLNEALF 551 + E I K + L N+V++ +GE + + D+TE K+ + L Sbjct: 1024 HKHWVG-EIWIRNKQRKAILVWLEINQVIDIKGETSHFVAVFTDITERKKAEQDLR 1078 >UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RK65_9PROT Length = 1327 Score = 725 bits (1872), Expect = 0.0, Method: Composition-based stats. Identities = 187/841 (22%), Positives = 318/841 (37%), Gaps = 42/841 (4%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + A RA + + ES + + + IG++ L+ N+ + GY + L G Sbjct: 497 VTARRAAEEALVESLWEQQLIFDNAMIGISYH-RNRMILRCNRRCEEIFGYLEGGLAGQP 555 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 + L ++ + + + S T+ E Y R+G +W + Sbjct: 556 TRVLFASDEAWEAVGRQVYGESASGETFDGELLYQRRDGTPIWVHAIGRTI-GESADSET 614 Query: 407 FIAQIEDINELKRTEQVNQQLM------------------ERITLANEAGGIGIWEWELK 448 +I D+ + EQ +Q + EA ++ + Sbjct: 615 WIWAYADVTAQRAAEQALRQSHLELEQRVADRTLELSQQLHFMRQLIEAIPGPVFYKSQE 674 Query: 449 PNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSR-SPFKLEFRI 507 ++ EL V+ V P D K D L +R E R+ Sbjct: 675 GRYLGCNQAFLELIGKSRDEVVGATVY--DVAPADLADRYKAADDELLARLGSQVYEARV 732 Query: 508 TVKDGIRHIRALANRVLNKEGE-VERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGE 566 DG K GE L+G+ +D+TE K++ L Q DS E Sbjct: 733 LDADGHYRDVIFHKATYGKPGENGGGLVGVMLDITERKRMEARLLQ----AATVFDSSAE 788 Query: 567 AVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRS 626 + I +N +++G+T++E +G + + + +++ A ++ Sbjct: 789 GITITAPDGNIIAVNRAFTEITGYTEDEVIGRNPRMLQ--SGFQDRRFYLDMWQALGTQG 846 Query: 627 AIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDA 686 ++ + G ++ +I+ + G V V D+TE R+ QL + A HD Sbjct: 847 RWRGELWNRRKDGQTFLESLTISAVKDAQGKVAHYVGVFSDITELRRAHDQLDHQAHHDP 906 Query: 687 LTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASL 746 LT L NR +L LQ + A+ FIDLDRFK +ND+ GH GD +L E+A Sbjct: 907 LTGLPNRLLLGDRLHKALQRAHRDETGLAVFFIDLDRFKNINDTLGHQVGDRVLCEVAWR 966 Query: 747 MLSMLRSSDVLARLGGDEFGLLLPDCNVESAR-FIATRIISAVNDYHFIWEGRVHRVGAS 805 + ++R SD + RLGGDEF +++ D +A IA +I++ + E VGAS Sbjct: 967 LGRLMRESDTVGRLGGDEFLIVIEDVGEPTAVSHIAEKILNVLQASPVTVE-HEFFVGAS 1025 Query: 806 AGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRM 865 GI++ + A +M AD+A Y +K GR + R M D + R Sbjct: 1026 IGISVFPQDGADAETLMKNADVAMYRAKERGRNTYEFFTKDLTQTSLARLQMETDLR-RA 1084 Query: 866 IKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDR 924 I+ +L + S + + + +L W + ++ F + + L + Sbjct: 1085 IERGELRVYLQPQFS--LATGKVVGAEALVRWLRPQQGLVLPGEFIKLAEESGLIVPIGE 1142 Query: 925 RVFHEFFQQAAKAVASKGIS--ISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIP 982 V Q A VA+ +S+ +S + + LE S LP R L L I Sbjct: 1143 WVQGTAACQWATWVAAGLAPGVLSVNVSGVEFARGRIQQTARRTLELSGLPARFLELEIT 1202 Query: 983 AEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQG 1038 AI+ HAE+ + LR G +V+ G LK + L +D + Sbjct: 1203 ESAIMSHAENSVQVLDNLRAMGISLVIDDFGTGYSSLAYLKRLPLNKLKVDQSFVRGLPN 1262 Query: 1039 NLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 + D + + L + IA V + L+G G D + G + P D Sbjct: 1263 DTEDCAIARAVIALGHSLQLTVIAEGVETEAQREFLTGEGCDEMQGYLRGRPMPFDDYHA 1322 Query: 1099 S 1099 Sbjct: 1323 R 1323 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 72/420 (17%), Positives = 136/420 (32%), Gaps = 12/420 (2%) Query: 291 RAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQL 350 RA + E + IG+A V + + N +L + GYS +L G + + Sbjct: 251 RASAAAMDALLREQTLIFEAAPIGIAFV-RDRIIQRCNPSLERIFGYSPGQLIGQSTRCF 309 Query: 351 TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQ 410 E+ ++ + +L+ E ++ E +Y +G +W + SL + + Sbjct: 310 FASEEAWREKGERAQLLIDECGSFVGEVQYCKSDGLPIWCRVTGSLA-NPGEPGDGLVWL 368 Query: 411 IEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKP 470 ED+ E ++ ++ + L+ L E GI I + ++ P Sbjct: 369 FEDVTEKRQADRAMEALLREQALIFERAPTGIAFLR-DRVIQRCNPSFERIFGYAPGQLL 427 Query: 471 NWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEV 530 + A + F E DG + +LN Sbjct: 428 GQSTRVCFASEAAWREAGERAYAVADESGKFIGELEYCRADGTPIWCQVTGSLLNPANPA 487 Query: 531 ERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGW 590 E + + D+T + EAL + + D+ + I N E++ G+ Sbjct: 488 EGYVWLFEDVTARRAAEEALVESLWEQQLIFDNAMIGI-SYHRNRMILRCNRRCEEIFGY 546 Query: 591 TQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITP 650 + G P VL + + +Y S + +++ R G VH Sbjct: 547 LEGGLAGQP-TRVLFASDEAWEAVGRQVYGESASGETFDGELLYQRRDGTPIWVHAIGRT 605 Query: 651 LSTLDGSNIGSVLVIQDVTESRKMLRQLSY------SASHDALTHLANRASFEKQLRILL 704 + S + DVT R + L D L+ + F +QL + Sbjct: 606 IGESADSET-WIWAYADVTAQRAAEQALRQSHLELEQRVADRTLELSQQLHFMRQLIEAI 664 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 66/420 (15%), Positives = 137/420 (32%), Gaps = 10/420 (2%) Query: 259 TPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALV 318 + P P L + +T + + + E + E + G+ ++ Sbjct: 98 VAHLIARAIDPAAPRLGTVWIVRDVTQEVLTRDTSARLLREQ----QLIFENAETGIVIL 153 Query: 319 GTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEK 378 E + N+ + LGY+ +EL G + + E+ + + E Y + Sbjct: 154 -RERIIQRCNRRFAELLGYAADELVGQSTRLYYPSEEAWLETGRRAYAAIAETGIYHGDT 212 Query: 379 RYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAG 438 + RNG+ + S++ + ++ ED++E + + L+ TL EA Sbjct: 213 IFRRRNGESFCCHITGSMMNRANPDE-GYVWLYEDVSEKRASAAAMDALLREQTLIFEAA 271 Query: 439 GIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSR 498 IGI + I + + ++ P E + + + + Sbjct: 272 PIGI-AFVRDRIIQRCNPSLERIFGYSPGQLIGQSTRCFFASEEAWREKGERAQLLIDEC 330 Query: 499 SPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLH 558 F E + DG+ + + N + L+ + D+TE +Q + A+ Sbjct: 331 GSFVGEVQYCKSDGLPIWCRVTGSLANPGEPGDGLVWLFEDVTEKRQADRAMEALLREQA 390 Query: 559 ITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENI 618 + + + + I NP E++ G+ + LG V + E Sbjct: 391 LIFERAPTGIAFLR-DRVIQRCNPSFERIFGYAPGQLLGQS-TRVCFASEAAWREAGERA 448 Query: 619 YSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQL 678 Y+ ++ G + + L G V + +DVT R L Sbjct: 449 YAVADESGKFIGELEYCRADGTPIWCQVTGS-LLNPANPAEGYVWLFEDVTARRAAEEAL 507 Score = 109 bits (273), Expect = 7e-22, Method: Composition-based stats. Identities = 64/396 (16%), Positives = 132/396 (33%), Gaps = 18/396 (4%) Query: 298 SESETHFRNAMEYSAIGMALVGTEGQWLQ-TNKALCQFLGYSQEELRGLTFQQLTWPEDL 356 + ++ +++S G+A+V T + + N + G+ L G + P+D Sbjct: 8 EQQLLEYKAILDHS--GIAVVCTRSRLVYRCNPRAEELFGWPAGTLVGQ-LDAVFLPDDA 64 Query: 357 NKDLQQ---VEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIED 413 + D + +L G+I +E R R+G A L + L + + D Sbjct: 65 SCDALRGTVRPQLRVGKI--VDLETRLARRDGSTFVAHLIARAI-DPAAPRLGTVWIVRD 121 Query: 414 INELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFS-WDKRMFELYEIPPHIKPNW 472 + + T + +L+ L E GI L+ I ++R EL Sbjct: 122 VTQEVLTRDTSARLLREQQLIFENAETGIVI--LRERIIQRCNRRFAELLGYAADELVGQ 179 Query: 473 QVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVER 532 E + ++ + + ++G + ++N+ E Sbjct: 180 STRLYYPSEEAWLETGRRAYAAIAETGIYHGDTIFRRRNGESFCCHITGSMMNRANPDEG 239 Query: 533 LLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQ 592 + + D++E + A+ + ++ + + I NP E++ G++ Sbjct: 240 YVWLYEDVSEKRASAAAMDALLREQTLIFEAAPIGIAFVR-DRIIQRCNPSLERIFGYSP 298 Query: 593 EEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLS 652 + +G E + +V C+S G + +T Sbjct: 299 GQLIGQSTRCFFASEEAWREKG-ERAQLLIDECGSFVGEVQY-CKSDG-LPIWCRVTGSL 355 Query: 653 TLDGSN-IGSVLVIQDVTESRKMLRQLSYSASHDAL 687 G G V + +DVTE R+ R + AL Sbjct: 356 ANPGEPGDGLVWLFEDVTEKRQADRAMEALLREQAL 391 >UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P5X9_9PROT Length = 927 Score = 722 bits (1864), Expect = 0.0, Method: Composition-based stats. Identities = 175/820 (21%), Positives = 321/820 (39%), Gaps = 29/820 (3%) Query: 292 AERKHISESETHFRNAMEYSAIGMALV-GTEGQWLQTNKALCQFLGYSQEELRGLTFQQL 350 E K + + +E + G+ L+ ++ TN+ GY+ EL G + Sbjct: 120 TEDKKAAAALRLQSQIVENAVEGIVLIKASDSTIQYTNRQFETLFGYAPGELIGKHISII 179 Query: 351 TWPEDLN--KDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFI 408 P + + + Q++ + + E +S E ++G + L S +H + +I Sbjct: 180 NAPGNKSQMETAQEINRQLEKE-GVWSGEVFNRRKDGTTINTFLNASSFQHPE-LGDLWI 237 Query: 409 AQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHI 468 DI + K TE V + + A + G W +++ + + L Sbjct: 238 GYQRDITKRKLTEAVMLEKESQYRAAIDTAADGFWLVDMQGRLLEVNDAYARLSGYSREE 297 Query: 469 KPNWQV-WYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKE 527 + + + ++ + I + +++ + + KDG ++ + Sbjct: 298 LIGMSIPELDAI--DNSELVRARIEEIIRNGGYLEFDTMHKRKDGSLWPVHISTTYSSVS 355 Query: 528 GEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKM 587 G R + D+TE K+ E+L + ++ EA++ D I +NP E+M Sbjct: 356 G--GRCFVFSTDLTEQKRAEESL----RLAAMVYENSSEAILVTDADNLIIAVNPAFEQM 409 Query: 588 SGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYS 647 +G+ E LG + + +++ A + +V ++G Y + Sbjct: 410 TGYAAAEVLGKNPRIFK--SGRHDRAFYHSMWLALDTEGYWHGEVWDKRKNGEEYIKLLT 467 Query: 648 ITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTV 707 I + DG+ V + D+TE +K+ + A++D+LT L NR F +L + Sbjct: 468 INVIRDDDGAIYRHVALFTDITERKKVEELIWRQANYDSLTKLPNRQMFHDRLEQEAKKA 527 Query: 708 NSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGL 767 + AL+ IDLDRFK VND+ GH GD LL E A + + +R SD +ARLGGDEF + Sbjct: 528 HRAGLSMALLLIDLDRFKEVNDTLGHDKGDILLIEAARRISACVRESDTVARLGGDEFIV 587 Query: 768 LLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQAD 826 +L + ++ S +A I+ ++ + F + + AS GI+L ++ + + AD Sbjct: 588 ILSELEDMASIDRVAQDILGSLAE-PFKLDAEPAYISASIGISLYPNDATELDVLFKHAD 646 Query: 827 IACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEA 886 A Y +K GR R + A R ++ D + + Q + + + Sbjct: 647 QAMYVAKYAGRNRFNYFTKDMQEAAQARMHLANDLRI-AVAAGQFRVYYQPIV--EMSSG 703 Query: 887 RNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVA--SKGI 943 + +L W ++ F + L + VF + QQ + + Sbjct: 704 QIYKAEALIRWQHPVRGMVSPAEFIPLAEETGLIVPIGEWVFRQAVQQVVQWRRKFHRSF 763 Query: 944 SISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQ----KLRLA 999 IS+ S A ++ E LE + + + I +LD V + R A Sbjct: 764 QISVNKSPVQFRHAESLSW-PEYLEQQHVSGDSIIVEITEGLLLDAEVEVNKKLLRFRDA 822 Query: 1000 GCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMK 1059 G ++ + G + LK DYL +D N+ D L I A +LG K Sbjct: 823 GIQVAIDDFGTGYSSLSYLKEFDIDYLKIDQSFVRNLGPGTSDLALCEAIIVMAHKLGFK 882 Query: 1060 TIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNS 1099 IA V + L+ G D G + + P + Sbjct: 883 VIAEGVETSTQHELLAAAGCDYGQGYLYSRPLPPEEFERQ 922 Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats. Identities = 64/384 (16%), Positives = 139/384 (36%), Gaps = 15/384 (3%) Query: 305 RNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVE 364 ++ ++ + G+ + N A + G + + L G Q PE + + ++ Sbjct: 10 QDIVDSIPAATFIKDAGGRIVYMNHACEEQWGITFDVLGGTDGSQFFPPEQIERFREKDR 69 Query: 365 KLISGEINTYSMEKRYYN-RNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQV 423 ++I+G E ++N + + + +G L+ + D+ E K+ Sbjct: 70 EVIAG-GKQIEYEAPFWNAKLKENRIGFFIKNPTFDAEGKLLFLVCITFDVTEDKKAAAA 128 Query: 424 NQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFE-LYEIPPHIKPNWQVWYECVLPE 482 + + E GI + + + R FE L+ P + P Sbjct: 129 LRL----QSQIVENAVEGIVLIKASDSTIQYTNRQFETLFGYAPGELIGKHISIINA-PG 183 Query: 483 DRQHAE--KVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDM 540 ++ E + I L+ + E KDG L + +G D+ Sbjct: 184 NKSQMETAQEINRQLEKEGVWSGEVFNRRKDGTTINTFLNASSFQHPELGDLWIGYQRDI 243 Query: 541 TEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPL 600 T+ K + +++ + +D+ + +DM ++ +N ++SG+++EE +G+ + Sbjct: 244 TKRKLTEAVMLEKESQYRAAIDTAADGFWLVDMQGRLLEVNDAYARLSGYSREELIGMSI 303 Query: 601 LTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIG 660 + I + + I + +E D + + G + VH S T S G Sbjct: 304 PELDAIDNSE--LVRARIEEIIRNGGYLEFDTMHKRKDGSLWPVHISTTYSSVSGGRCFV 361 Query: 661 SVLVIQDVTESRKMLRQLSYSASH 684 D+TE ++ L +A Sbjct: 362 FS---TDLTEQKRAEESLRLAAMV 382 Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 44/137 (32%), Gaps = 3/137 (2%) Query: 549 ALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITF 608 Q +++ +DSI A D +I +MN E+ G T + G Sbjct: 1 MDSQLNKQVQDIVDSIPAATFIKDAGGRIVYMNHACEEQWGITFDVLGGTDGSQFFPPEQ 60 Query: 609 GDNGPLMENIYSADTSRSAIEQDV-VLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQD 667 + E IE + + + + + P +G + V + D Sbjct: 61 IER--FREKDREVIAGGKQIEYEAPFWNAKLKENRIGFFIKNPTFDAEGKLLFLVCITFD 118 Query: 668 VTESRKMLRQLSYSASH 684 VTE +K L + Sbjct: 119 VTEDKKAAAALRLQSQI 135 >UniRef50_Q7NTV0 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NTV0_CHRVO Length = 1390 Score = 721 bits (1862), Expect = 0.0, Method: Composition-based stats. Identities = 187/818 (22%), Positives = 321/818 (39%), Gaps = 31/818 (3%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 ERK E R + + + + +G ++ N A C+ G+S ++LR + L Sbjct: 574 TERKRADED---LRLVLNEAGDAIWVTDVDGYFIFANPAACRLTGHSLDDLREMHIHDLV 630 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 PE L + + K+ +G E + + V L ++ +IA Sbjct: 631 APECLGLLAEHLAKINNGAF--LRSEWKLRLKKSGTVSVDLTSGKMKDG-----RYIAFG 683 Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI-PPHIKP 470 D+ E R EQ + ++ G W+W L+ N F R + P + Sbjct: 684 RDLTEQHRAEQELRDRERQLARVIAGSDQGFWDWNLETNRFQVSPRWESMLGYGPGEMHI 743 Query: 471 NWQVWYECVLPEDRQHAEKVIRDSLQSR-SPFKLEFRITVKDGIRHIRALANRV--LNKE 527 WYE V PED + I+ +L ++E R + G RV N Sbjct: 744 TADSWYEHVHPEDVERTRDSIQRNLSGEMKSHEVEIRCRTRGGDWRWILSRGRVVERNDR 803 Query: 528 GEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKM 587 GE + G + D+TE K Q ++ DS E ++ ++ IT +N ++ Sbjct: 804 GEPLSMSGTHTDITERKVFE----QTQKEAAAVFDSSYEGILMVNPDGVITKVNNAFSRI 859 Query: 588 SGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYS 647 +G++ EEA+G + + E ++++ ++ +SG Y S Sbjct: 860 TGYSAEEAIGQKPSLL--ASGKQPISFYEELWNSVKGHDFWRGELWNRRKSGELYAELLS 917 Query: 648 ITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTV 707 I+ + G + + D+T+ ++ +L A +D LT + NR +LR + Sbjct: 918 ISVVRDEQGQVQHYIGIFSDITQLKQHEAELDRVAHYDPLTGVPNRRLLSDRLRQAIVRA 977 Query: 708 NSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGL 767 N + + A+ F+DLD FKAVND GHA GD LL +++ + S+LR D LARLGGDEF + Sbjct: 978 NRSGRSCAVCFLDLDGFKAVNDKYGHAVGDQLLVTVSNNLKSILRGDDTLARLGGDEFVV 1037 Query: 768 LLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQAD 826 LL + + E + R+++ V AS G++L +N ++ AD Sbjct: 1038 LLSEVGSPEECMLVLDRVLAT-ASRPMPVGDAEVGVTASIGVSLYPQDNVDPDTLLRHAD 1096 Query: 827 IACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEA 886 A Y +K+ G+ R +++P+ E L+ + + ++ + V + Sbjct: 1097 QAMYLAKDAGKNRYQLFDPENDRKAQEHRQF-LELLRQALVHDEFALFYQPVVDLQ--SG 1153 Query: 887 RNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK-GIS 944 + + +L W ++ F S L A V Q ++ + I Sbjct: 1154 EIISVEALIRWRHPRRGLLAPAEFLPHLSGNELEAAFGLWVLDAALSQVSRWAEAGFHIK 1213 Query: 945 ISLPLSVAGLSSATLVNDLLEQLENSP-LPPRLLHLIIPAEAILDHAESV---QKLRLAG 1000 IS +S L L L P +PP L L I A D +++ Q+ R G Sbjct: 1214 ISTNVSTNYLLRTDFSQQLSTVLGRYPNVPPWHLELEIVESASGDVEQTIRVLQRCRELG 1273 Query: 1001 CRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKT 1060 L G L+ D L +D ++ G+ D ++ + A K Sbjct: 1274 VHFALDDFGTGHASLTHLRRLPVDTLKIDNSFVHDMIGSQDDRRIVEGVIELASIFARKA 1333 Query: 1061 IAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 IA V L +G G IA D +++ Sbjct: 1334 IAEGVETMEHAALLRSLGCHYAQGFGIARPMEADKVMD 1371 Score = 183 bits (466), Expect = 3e-44, Method: Composition-based stats. Identities = 71/406 (17%), Positives = 157/406 (38%), Gaps = 26/406 (6%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + + + +SE + A + + IG + + G +++ Sbjct: 315 ITRQKQAENQLRDSEAMLQQAQQLAGIGSWSWDLVDDRQSWSPEAYRLFGLTEKSGPPGY 374 Query: 347 F--QQLTWPEDLNKDLQQVEKL-ISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGT 403 ++ + + + VE+ + G Y + +G+ W + R +G Sbjct: 375 PAMRRYFDADGWAQLSEAVERCKLVGM--GYECDVELLRADGESRWLTMRGEARRDEEGA 432 Query: 404 PLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYE 463 + ++DI E KR + R+ L EA G W+W+L+ R +E+ Sbjct: 433 IVSLYGTMQDITERKRMAMQVKASESRLQLVAEATSDGFWDWDLRSGKVYRSSRYYEVTG 492 Query: 464 IPPHIKP-NWQVWYECVLPEDRQHAEKVIRDSLQSRSP-FKLEFRITVKDG-IRHIRALA 520 P +++ + + V P D + + I + ++P +++FR+ +D +R ++A Sbjct: 493 TQPEDDSGDFRFFRQMVHPADLPYVLQAIEAHRRGKTPRIEIDFRLARQDEGVRWLQARG 552 Query: 521 NRV-LNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITF 579 V ++ G RL+G D+TE K+ + E L + L+ G+A+ D+ F Sbjct: 553 RAVEWDERGAAVRLVGNLSDITERKRAD-------EDLRLVLNEAGDAIWVTDVDGYFIF 605 Query: 580 MNPVAEKMSGWTQEEALGVPLLTVLHIT-FGDNGPLMENIYSADTSRSAIEQDVVLHCRS 638 NP A +++G + ++ + + ++ G + I + RS + L + Sbjct: 606 ANPAACRLTGHSLDDLREMHIHDLVAPECLGLLAEHLAKINNGAFLRSEWK----LRLKK 661 Query: 639 GGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASH 684 G+ V + + + +D+TE + ++L Sbjct: 662 SGTVSVDLTSGKMKDG-----RYIAFGRDLTEQHRAEQELRDRERQ 702 Score = 182 bits (463), Expect = 6e-44, Method: Composition-based stats. Identities = 92/559 (16%), Positives = 197/559 (35%), Gaps = 30/559 (5%) Query: 146 LTPGDDPLRAFLIWVLSESIGALALVPLGLLFKPHYLLRHRNPRLLFESLLTLAITLTLS 205 L G D R + + L L LL R +L + L + S Sbjct: 31 LLAGLDASRVVPLSIAKGVFFVLVTSILLLLALRAVPSREGGAQLAWLGNLANGM---RS 87 Query: 206 WLSMLYLPWPFTFIIVLLMWSAVRL---PRMEA---FLIFLTTVMMVSLMMAADPSLLAT 259 +L +P +V + + P + A ++F+ +++ + M P LLAT Sbjct: 88 ERWTNWLAYPAVLALVAGALALRQFLMGPELGAHPMLILFMLPIILGACMGGIGPGLLAT 147 Query: 260 PRTYLM-----------SHMPW---LPFLLILLPANIMTMVMYAFRAERKHISESETHFR 305 + L + PW + L + L ++++ R + ++ Sbjct: 148 VLSVLAVDLMVEPHLHAAQTPWHSKVQLLFLALNGLAVSLLCEMLRQALERVALHRALLD 207 Query: 306 NAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEK 365 + ++ + + +G++L N+A F+G + E+ G + + E+ ++L ++ Sbjct: 208 AVVSSTSDAVFVKDVQGRYLLVNQAALAFVGKTSGEVIGKDDRD-VFDEETARELIIQDR 266 Query: 366 LISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQ 425 LI + E+ +NG+ + L+ V + +G DI K+ E + Sbjct: 267 LIMQSGRVQTHEEHLALQNGERMVFLVTKGPVYNHEGLLGGLFGISRDITRQKQAENQLR 326 Query: 426 QLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP-HIKPNWQVWYECVLPEDR 484 + A + GIG W W+L + SW + L+ + P + + Sbjct: 327 DSEAMLQQAQQLAGIGSWSWDLVDDRQSWSPEAYRLFGLTEKSGPPGYPAMRRYFDADGW 386 Query: 485 QHAEKVIRDSLQSRSPFKLEFRITVKD-GIRHIRALANRVLNKEGEVERLLGINMDMTEV 543 + + ++ + + D R + ++EG + L G D+TE Sbjct: 387 AQLSEAVERCKLVGMGYECDVELLRADGESRWLTMRGEARRDEEGAIVSLYGTMQDITER 446 Query: 544 KQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTV 603 K++ + + RL + ++ + D+ + + +++G E+ G Sbjct: 447 KRMAMQVKASESRLQLVAEATSDGFWDWDLRSGKVYRSSRYYEVTGTQPEDDSG-DFRFF 505 Query: 604 LHITFGDNGPLMENIYSADTS--RSAIEQDVVLHCRSGGSYDVHYSITPL-STLDGSNIG 660 + + P + A IE D L + G + + G+ + Sbjct: 506 RQMVHPADLPYVLQAIEAHRRGKTPRIEIDFRLARQDEGVRWLQARGRAVEWDERGAAVR 565 Query: 661 SVLVIQDVTESRKMLRQLS 679 V + D+TE ++ L Sbjct: 566 LVGNLSDITERKRADEDLR 584 >UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magnetospirillum RepID=Q2W154_MAGSA Length = 802 Score = 721 bits (1861), Expect = 0.0, Method: Composition-based stats. Identities = 174/807 (21%), Positives = 332/807 (41%), Gaps = 33/807 (4%) Query: 302 THFRNAMEYSAIGMALVGT-EGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDL 360 T F ++ S +G+++ +G L N+ CQ G + E+ G + ++ D ++ L Sbjct: 8 TDFLGILDESPVGVSVSRRRDGLVLFVNRRFCQITGMTPEQCIGHSARR--HFADDDQRL 65 Query: 361 QQVEKLI-SGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKR 419 + V +L +GEI + +++ +G W++L + +A + D+++ K+ Sbjct: 66 EVVRQLKEAGEIAD--ADVKFFRVDGSSFWSVLTIRSATLNGEAV--NLAWLYDVSKRKQ 121 Query: 420 TEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECV 479 EQ I ++ GI + I + + ++E P +W Sbjct: 122 AEQAILDGKTLIRAMLDSSTDGIVLVNAEGTILAVNAAASAIFEKNSDDLPGKAIWDHL- 180 Query: 480 LPEDR-QHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINM 538 P+ + I L R + I K H+ +A + G+ +R+ + Sbjct: 181 -PDSVVAPMRRGIDRVLDRRETVESHHAIGAKLFDVHMHLVA----DSVGQRDRVAIFSR 235 Query: 539 DMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGV 598 D+T+ Q + L +L L+ +V+ D I ++N +SG++++E LG Sbjct: 236 DVTQSHQRRQQL----RKLETALEQAPVSVMITDSHGAIEYVNRAFVLVSGYSEDEVLGR 291 Query: 599 PLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSN 658 + + L +++ S + + ++ + G + + +I+P+ DG Sbjct: 292 NPRLLK--SGETVASLYRDMWHCLASGATWQGELCNRAKDGSLFWEYATISPIRDDDGVV 349 Query: 659 IGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVF 718 + V +++T+ ++ +QL + A+HD LT L NR E ++ ++ +R L+F Sbjct: 350 THFMAVKENITQRKETEQQLVHQATHDTLTGLPNRLLLEDRVHHAIEVAKREGRRIGLMF 409 Query: 719 IDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD-CNVESA 777 +DLDRFK VNDS GH AGD LL+ ++ + LR SD +ARLGGDEF ++L + Sbjct: 410 LDLDRFKIVNDSLGHVAGDELLKVVSDRLRHTLRRSDTVARLGGDEFVVVLTHFQSTTEL 469 Query: 778 RFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGR 837 +A +I +A+++ G VGAS GI + D+ +M AD A Y +K GR Sbjct: 470 AEVAEKISAALDE-PVELSGHKVHVGASIGIAIYPDDGDNFNALMKDADTAMYRAKQKGR 528 Query: 838 GRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW 897 Y+ +R + + R + + + + R + +L W Sbjct: 529 NTFCFYDSNMNDEALDRLKLE-EALRRALVRGEFQLFYQPQVDLQ--TGRTSGVEALIRW 585 Query: 898 S-CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK--GISISLPLSVAGL 954 + E + F + L + V E +Q A + GI +++ +S Sbjct: 586 NSPERGQVSPALFIPVAEESNLISMIGWWVLEESCRQIAAWREAGLTGIKVAVNVSGRQF 645 Query: 955 SSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRLAGCRIVLSQVGR 1010 + LV + + + + P L + + ++ E + +LR G ++ + G Sbjct: 646 LNHALVECISDLMAQYAVLPSQLEIELTESTVMAEPDRAIEQLTRLREIGIQVSVDDFGT 705 Query: 1011 DLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLV 1070 + LK + +D +V + +++ I G A L M +A V Sbjct: 706 GYSSLSYLKRLPLSTIKVDRSFVRDVNNQSDNAAIVSAILGLADALDMSIVAEGVETEGE 765 Query: 1071 MDTLSGIGVDLIYGEVIADAQPLDLLV 1097 L G + G A P D L Sbjct: 766 EQHLKDAGCIKVQGFRYAKPMPADQLA 792 Score = 89.9 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 5/148 (3%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + R+ + + ET A+E + + + + + G N+A GYS++E+ G Sbjct: 237 VTQSHQRRQQLRKLET----ALEQAPVSVMITDSHGAIEYVNRAFVLVSGYSEDEVLGRN 292 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 + L E + + + ++ T+ E ++G + W +S +R DG + Sbjct: 293 PRLLKSGETVASLYRDMWHCLAS-GATWQGELCNRAKDGSLFWEYATISPIRDDDGVVTH 351 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLA 434 F+A E+I + K TEQ TL Sbjct: 352 FMAVKENITQRKETEQQLVHQATHDTLT 379 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 67/465 (14%), Positives = 148/465 (31%), Gaps = 69/465 (14%) Query: 290 FRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQ 349 + + I + +T R ++ S G+ LV EG L N A + ++L G Sbjct: 119 RKQAEQAILDGKTLIRAMLDSSTDGIVLVNAEGTILAVNAAASAIFEKNSDDLPGKAIWD 178 Query: 350 LTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIA 409 + + +++++ E + + + LV + G Sbjct: 179 HLPDSVVAPMRRGIDRVLDRR------ETVESHHAIGAKLFDVHMHLVADSVGQRDRVAI 232 Query: 410 QIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMF--------EL 461 D+ + + Q ++L + E + + + I ++ E+ Sbjct: 233 FSRDVTQSHQRRQQLRKLETAL----EQAPVSVMITDSHGAIEYVNRAFVLVSGYSEDEV 288 Query: 462 YEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIR-ALA 520 P + + + + + L S + ++ E KDG A Sbjct: 289 LGRNPRLLKSGETVASLY---------RDMWHCLASGATWQGELCNRAKDGSLFWEYATI 339 Query: 521 NRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKER-----------LHITLDSIGE--- 566 + + + +G V + + ++T+ K+ + L + L + E Sbjct: 340 SPIRDDDGVVTHFMAVKENITQRKETEQQLVHQATHDTLTGLPNRLLLEDRVHHAIEVAK 399 Query: 567 ------AVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITF------GDN--- 611 ++ +D+ + +N ++G + + L L + GD Sbjct: 400 REGRRIGLMFLDLD-RFKIVNDSLGHVAGDELLKVVSDRLRHTLRRSDTVARLGGDEFVV 458 Query: 612 -----GPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSI-TPLSTLDGSNIGSVLVI 665 E A+ +A+++ V L SG V SI + DG N +++ Sbjct: 459 VLTHFQSTTELAEVAEKISAALDEPVEL---SGHKVHVGASIGIAIYPDDGDNFNALMKD 515 Query: 666 QDVTESRKMLRQLSYSASHDALTH--LANRASFEKQLRILLQTVN 708 D R + + +D+ + +R E+ LR L Sbjct: 516 ADTAMYRAKQKGRNTFCFYDSNMNDEALDRLKLEEALRRALVRGE 560 >UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T5E1_9BURK Length = 1055 Score = 718 bits (1854), Expect = 0.0, Method: Composition-based stats. Identities = 172/847 (20%), Positives = 341/847 (40%), Gaps = 46/847 (5%) Query: 273 FLLILLPANIMTMVMYAFR--------AERKHISESETHFRNAMEYSAIGMALVGTEG-Q 323 L+ +L +++ M+ + R + ++ ++ FR+ + + M + + + Sbjct: 207 LLVTMLSGSVLLMLTFGVRENSVREKLRSARALARNDERFRSLFDDHTVPMYIFDRDTLR 266 Query: 324 WLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLIS-GEINTYSMEKRYYN 382 +L N A + GY++ E G+T + + ++ + + + + + +T + R+ Sbjct: 267 FLAVNTAAIEQYGYTESEFLGMTIRAIRPTSEVARLERHLARSADLRQSHTMAGIWRHRR 326 Query: 383 RNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGI 442 ++G ++ ++ + + +A +D+ + E + + + + I Sbjct: 327 KDGSIISVNVSYHALNFMGRDASFVLA--DDVTDQINAEAEALRSNQMLEAVIDNIPQRI 384 Query: 443 WEWELKPNIFSWDKRMFELYEI--------PPHIKPNWQVWYECVLPEDRQHAEKVIRDS 494 + +L + + W+ + + + DR+ A + Sbjct: 385 FWKDLNSRYLGCNMAFARDAGLAYPEQVVGKSDTDLPWRAFADLLNEHDREVASTGVPK- 443 Query: 495 LQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEK 554 E + R + +G+V +LG D+TE K+ + AL + Sbjct: 444 ------MNFEVDFVIDGVHRTRVTSKLPFTDGDGQVIGVLGSYTDITEQKRADLALRLQS 497 Query: 555 ERLHITLDSIGEAVVCIDMAMK-ITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNG- 612 L ++++I + + I ++NP +++G+ +E +G + G Sbjct: 498 RALDASVNAI--LITAPSPSGNLIEYVNPAFMRITGYDLDEVIGHDCRVLQRDDRDQEGV 555 Query: 613 PLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESR 672 L+ +A+ SA+ V + + G + I P+ +G + VI DVTE Sbjct: 556 ALIREALAANREVSAV---VRNYRKDGALFWNQLFIAPVPNAEGVITHHIGVINDVTELI 612 Query: 673 KMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAG 732 + QL Y A++D LT L NR +L L H A+VF+DLD FK VNDS G Sbjct: 613 RYQEQLEYQANYDGLTRLPNRNLLRDRLEHALVVAQRHHTGVAVVFLDLDGFKNVNDSLG 672 Query: 733 HAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDY 791 H+ GD LL +A + R+SD +AR GGDEF +++ D + +S R+ +++ + Sbjct: 673 HSVGDRLLGVVAERLARCSRTSDTVARHGGDEFVIVMTDTVDEQSLITWMERVRASIAE- 731 Query: 792 HFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAH 851 +G VG S G +L + A +M +AD+A Y +K+ GR Y+P+ A+ Sbjct: 732 PVWLDGTELYVGCSMGASLFPQDGDDAETLMKKADVAMYRAKDMGRNTFQFYQPEMNASA 791 Query: 852 SERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWS-CEGEIIDEQTFR 910 R +++N+ ++ I + + + +L W E ++ +F Sbjct: 792 GA-RLNLERRLRRALRDNEFLLHYQPQVD--IVSGQIVGIEALVRWHDPEAGLVPPSSFI 848 Query: 911 RSFSDPALSHALDRRVFHEFFQQ--AAKAVASKGISISLPLSVAGLSSATLVNDLLEQLE 968 + L L V E +Q A + +S+ LS + +++ L Sbjct: 849 PLAEESGLIGPLSEWVLREACRQNKAWQDQGLPPARVSVNLSARVFQQRNIAKLVMQVLA 908 Query: 969 NSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMAD 1024 + L PR L L + I+ +AE + +L G + + G + LK D Sbjct: 909 ETGLEPRYLELELTESTIMRNAEEAVLMLNELHALGIGLAIDDFGTGYSSLSYLKRFPVD 968 Query: 1025 YLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYG 1084 L +D +++ + DE + + I A L ++ IA V +D L D + G Sbjct: 969 RLKIDRSFVSDIGVSGDDETITSAIIALAHSLKLQVIAEGVETSAQLDFLKERACDEMQG 1028 Query: 1085 EVIADAQ 1091 A Sbjct: 1029 FYFAKPL 1035 >UniRef50_Q2YC85 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YC85_NITMU Length = 951 Score = 714 bits (1844), Expect = 0.0, Method: Composition-based stats. Identities = 217/830 (26%), Positives = 370/830 (44%), Gaps = 45/830 (5%) Query: 302 THFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNK--- 358 T F N ++ G+ +V + G+ + N + GYS EL G + L P Sbjct: 134 TKFGNLLDSIPDGIVIVNSTGRIVLVNTQTEKLFGYSAHELCGQPVEMLLPPRKRGLHSG 193 Query: 359 DLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELK 418 + E + ++G +++S + +G + I+ I DI++ K Sbjct: 194 ERAAYFTHPHSRTLVADWELYGFRKDGTEFPVEISLSPIETDEGR--FSISAIRDISDRK 251 Query: 419 RTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYEC 478 + ++ EA I I + + +L++ ++ Sbjct: 252 KA-------EQKFRGLLEAAPDAIVIVNRNGEIVLVNSQTEKLFDYQREQLLGKKMEM-L 303 Query: 479 VLPEDRQH----AEKVIRDSLQSRSPFKLE-FRITVKDGIRHIRALANRVLNKEGEV--- 530 + P R E R LE + + + + + +EG + Sbjct: 304 IPPRYRSKHPGFREDFFRAPRTRPMGIGLELYGLRRDGTEFPVEISLSPLETEEGILVSS 363 Query: 531 ------------ERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKIT 578 E + D+TE + +ALF+EKE L +TL IG+AV+ D +T Sbjct: 364 AIRDITERKRTKEIQTQLRRDLTEREIAEKALFEEKELLRVTLSCIGDAVITTDTEGSVT 423 Query: 579 FMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSA---IEQDVVLH 635 ++NPVAE M+G + ++A G+PL V I + L + + +L Sbjct: 424 YLNPVAEAMAGCSSDDAKGLPLQDVFQIIHAETNELASSPAERVLRNKETVSLNSHALLI 483 Query: 636 CRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRAS 695 R G ++ + S P+ +GS IG VLV +DV+ ++KM ++ Y A+HDALT L NR Sbjct: 484 RRDGQTFPIEDSAAPIRDQNGSIIGVVLVFRDVSHAQKMAMEMRYQATHDALTGLINRHE 543 Query: 696 FEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSD 755 FE++L+ +L+ + H L+++DLD+FK VND+ GH AGD LL++L SL+ + LR D Sbjct: 544 FERRLKQVLERDKGADE-HTLLYLDLDQFKIVNDTCGHLAGDELLKQLTSLLQAKLRKDD 602 Query: 756 VLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNN 815 LARLGGDEFGLLL C SA +A + V ++ F+WE R+ +G S G+ Sbjct: 603 TLARLGGDEFGLLLERCPRGSAFRVAEVLRQTVQEFRFVWEERIFSLGISIGLATFSGGE 662 Query: 816 HQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAM-SLDEQWRMIKENQLMML 874 ++V+ AD AC+ +K+ GR RV +Y R M ++ + + + + ++ Sbjct: 663 QTFSDVLRMADTACFLAKDKGRNRVQLYASDDKNLEKRRGEMGWVERLHKALDKQRFVLY 722 Query: 875 AHGVASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQA 934 + + P + + + I L++ GE++ F + L LDR V F Q Sbjct: 723 SQKILPLSAPSSTSHYEILLRMKGENGELVPPMAFIPAAERYGLMPQLDRWVITNAFAQY 782 Query: 935 AKAVASKGI--SISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH--- 989 A S+GI + ++ LS A + L + +++Q + S + P + I + + Sbjct: 783 ASHP-SRGIKDTCTINLSGASICDEHLYDFVVDQFKQSQIDPAGICFEITETVAIANLTQ 841 Query: 990 -AESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITI 1048 A ++KL+ GCR L G + F LK + DYL +DG + + +D ++ Sbjct: 842 AATLIRKLKELGCRFSLDDFGSGMSSFTYLKHLLVDYLKIDGAFIKGMLSDPIDHAMVEA 901 Query: 1049 IQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 I + ++TIA V ++ L IGVD G I + +P L + Sbjct: 902 INHIGHVMKIQTIAEWVEEESFLEALRKIGVDYAQGYAIEEPRPAITLCH 951 Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 66/405 (16%), Positives = 148/405 (36%), Gaps = 29/405 (7%) Query: 305 RNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT-WPEDLNKDLQQV 363 + ++ G + +G + NK GY+ E +L P+ K Q + Sbjct: 12 KLVLDEMPGGAIVTTGDGVVVYWNKGAQSIFGYTVAEALQRRLTELVGAPDHRPKINQSL 71 Query: 364 EKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQV 423 + E E ++G +++ ++ ++ Y + +I + + Sbjct: 72 R--NTHETRASVDEILCRKKDGSLLYVSMSCKVLSQDQRQDGYVLITSTNIT-HIKALRD 128 Query: 424 NQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPED 483 + + + ++ GI I + + +L+ H V + P Sbjct: 129 AKLINTKFGNLLDSIPDGIVIVNSTGRIVLVNTQTEKLFGYSAHELCGQPVEM-LLPPRK 187 Query: 484 RQH---AEKVIRDSLQSRS---PFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGIN 537 R SR+ ++L + + + + EG + Sbjct: 188 RGLHSGERAAYFTHPHSRTLVADWEL-YGFRKDGTEFPVEISLSPIETDEGRFS--ISAI 244 Query: 538 MDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALG 597 D+++ K+ + L++ +A+V ++ +I +N EK+ + +E+ LG Sbjct: 245 RDISDRKKAEQK-------FRGLLEAAPDAIVIVNRNGEIVLVNSQTEKLFDYQREQLLG 297 Query: 598 VPLLTVLHITFGDNGP-LMENIYSADTSRS-AIEQDVVLHCRSGGSYDVHYSITPLSTLD 655 + ++ + P E+ + A +R I ++ R G + V S++PL T + Sbjct: 298 KKMEMLIPPRYRSKHPGFREDFFRAPRTRPMGIGLELYGLRRDGTEFPVEISLSPLETEE 357 Query: 656 GSNIGSVLVIQDVTESRKMLRQLSYSASHDALT--HLANRASFEK 698 G I I+D+TE ++ +++ D LT +A +A FE+ Sbjct: 358 G--ILVSSAIRDITERKRT-KEIQTQLRRD-LTEREIAEKALFEE 398 Score = 98.4 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 43/290 (14%), Positives = 96/290 (33%), Gaps = 28/290 (9%) Query: 298 SESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLN 357 ++E FR +E + + +V G+ + N + Y +E+L G + L P + Sbjct: 251 KKAEQKFRGLLEAAPDAIVIVNRNGEIVLVNSQTEKLFDYQREQLLGKKMEMLIPPRYRS 310 Query: 358 K---DLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDI 414 K + + +E R+G +++S + +G + + I DI Sbjct: 311 KHPGFREDFFRAPRTRPMGIGLELYGLRRDGTEFPVEISLSPLETEEG--ILVSSAIRDI 368 Query: 415 NELKRTEQVNQQLMER-----------------ITLANEAGGIGIWEWELKPNIFSWDKR 457 E KRT+++ QL + + G + + + ++ + Sbjct: 369 TERKRTKEIQTQLRRDLTEREIAEKALFEEKELLRVTLSCIGDAVITTDTEGSVTYLNPV 428 Query: 458 MFELYEIPPHIKPN--WQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLE---FRITVKDG 512 + Q ++ + E + A L+++ L I Sbjct: 429 AEAMAGCSSDDAKGLPLQDVFQIIHAETNELASSPAERVLRNKETVSLNSHALLIRRDGQ 488 Query: 513 IRHIRALANRVLNKEGEVERLLGINMDMT-EVKQLNEALFQEKERLHITL 561 I A + ++ G + ++ + D++ K E +Q L Sbjct: 489 TFPIEDSAAPIRDQNGSIIGVVLVFRDVSHAQKMAMEMRYQATHDALTGL 538 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 20/128 (15%), Positives = 45/128 (35%), Gaps = 2/128 (1%) Query: 547 NEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHI 606 E+ + + LD + + + + N A+ + G+T EAL L ++ Sbjct: 1 MESTVIPTDFGKLVLDEMPGGAIVTTGDGVVVYWNKGAQSIFGYTVAEALQRRLTELV-- 58 Query: 607 TFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQ 666 D+ P + A +++ + G V S LS + ++ Sbjct: 59 GAPDHRPKINQSLRNTHETRASVDEILCRKKDGSLLYVSMSCKVLSQDQRQDGYVLITST 118 Query: 667 DVTESRKM 674 ++T + + Sbjct: 119 NITHIKAL 126 >UniRef50_B2J5P2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Nostocaceae RepID=B2J5P2_NOSP7 Length = 1224 Score = 713 bits (1842), Expect = 0.0, Method: Composition-based stats. Identities = 224/822 (27%), Positives = 385/822 (46%), Gaps = 17/822 (2%) Query: 285 MVMYAFRAERKHISESETHFRNAMEYSAIGMA--LVGTEGQWLQTNKALCQFLGYSQEEL 342 + + + + SET A + + +G +G+E Q + + G + E Sbjct: 404 AALNKRKQAEEELRRSETLLATAQKIAHLGSWEWHLGSEKQIWSA-ETF-RIFGLNPAES 461 Query: 343 --RGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHT 400 TF Q+ +PED + + + I+ N +++E R +G + + + T Sbjct: 462 VPTQATFLQMLYPEDRPVLQRHLLQAIAN-GNPFNLEYRIVQPDGSLRYLESRAEVAYDT 520 Query: 401 DGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFE 460 G + I DI E K+ E +Q R E I + I ++ Sbjct: 521 QGKTVRLYGAILDITERKQAEIALKQSEIRYRAIVEDQTEFIARYLPDGTITFVNQAFTR 580 Query: 461 LYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA 520 + P + + + DR+ ++I +E R+ ++D +R + Sbjct: 581 YFGRSPEQLID-SCYQPIIFEADRERVAQLIAAMNADNPVAIIENRVILEDSVRWTQWHN 639 Query: 521 NRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFM 580 + +++G + D+T +KQ+ E LFQEKE +TL SI +AV+ D +I ++ Sbjct: 640 RMLFDEQGCFIEFQTVGRDITALKQIEETLFQEKELAQVTLQSIRDAVITTDAFGRIQYL 699 Query: 581 NPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAI---EQDVVLHCR 637 NPVAE + G ++ A GV L V I ++N + I VL Sbjct: 700 NPVAESLIGCSEASAKGVLLEEVFRIVHETTREKVKNPIEQALQENRIVSLANHTVLITG 759 Query: 638 SGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFE 697 + S P+ +G IG+V+V DVT++R + RQLS+ A+HDALT L NR FE Sbjct: 760 RDQEIAIQDSAAPIRNREGQVIGAVMVFHDVTQNRLLSRQLSWQATHDALTGLVNRQEFE 819 Query: 698 KQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVL 757 +++ L +Q + L ++DLD FK VND+ GH AGD LLR++ L+ +R +D L Sbjct: 820 RRVEQALHVAKLDYQVYTLCYLDLDHFKIVNDTCGHVAGDELLRQITVLLQEKVRKTDTL 879 Query: 758 ARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQ 817 AR GGDEFGLLL C +E A +A ++S V ++ F+W+ +V +G S G+ +ID N+ Sbjct: 880 ARFGGDEFGLLLTQCTLEEALRVANNLLSCVQEFRFVWQEQVFSIGVSIGLVVIDTNSES 939 Query: 818 AAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQW-RMIKENQLMMLAH 876 AE++S AD ACY +KN GR RV V + +R M + + ++ + + Sbjct: 940 LAEIISTADAACYTAKNRGRNRVYVAQTDDQERLQQRGQMQWVGRISQALESDWFCLYVQ 999 Query: 877 GVASPR-IPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAA 935 +A+ + + + + L+L +G+++ F + L H +DR V F+ + Sbjct: 1000 RIAAIIPTDQNGDHYEVLLRLRDEQGKLVLPMAFIPAAERYNLMHLIDRWVIRTLFKNWS 1059 Query: 936 KAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----E 991 + V +K ++ LS + ++ ++ L EQ P+ P+ + I + + + Sbjct: 1060 RVVDNKQSIYAINLSGSSINDDRFIDFLHEQFTLHPISPQHICFEITETVAIANLLKARQ 1119 Query: 992 SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQG 1051 +QKL+ GCR L G + F LK+ DYL +DG N+ N +D ++T I Sbjct: 1120 FIQKLQRMGCRFALDDFGAGMSSFAYLKSLPIDYLKIDGSFIRNIVENPVDNAIVTAITR 1179 Query: 1052 HAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPL 1093 + +G++TIA V +++ ++ +G+D G IA PL Sbjct: 1180 ISSVMGIQTIAEFVENDAILERITALGIDYAQGYGIAVPHPL 1221 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 84/533 (15%), Positives = 192/533 (36%), Gaps = 36/533 (6%) Query: 194 SLLTLAITLTLSWLSMLYLPWPFTFIIVLL---MWSAVRLPRMEAFLIFLTTVMMVSLMM 250 +L +I + L + +PF +I +L + + M+ + ++ T + + Sbjct: 39 ALAYYSIPIALVYFVRKRQDFPFNWIFLLFATFIITCGTTHLMDIWTLWYPTYWLSGCIK 98 Query: 251 AADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKH----ISESETHFRN 306 A + + L+ +P L I + + RK + E E R Sbjct: 99 AITAIISLYTASELIPLIPKALALPSHAQLEIANQELEREISIRKQAELALQEREAMLRR 158 Query: 307 AMEYSAIG-----MALVGTEGQWLQTNKALCQFLGYSQEELR---GLTFQQLTWPEDLNK 358 + G + + ++ + + + + E++ L ++Q PED+ Sbjct: 159 ISDNLPNGAIYKVIRELDGSDRFDYISAGIERLMEVRVEDVLKDSSLLYRQFI-PEDVPL 217 Query: 359 DLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELK 418 V++ + + ++ R + + W + + DG ++ + D+ +LK Sbjct: 218 LQAAVDESRRN-FSVFDIQLRIQTPSARLKWLHFRSTPRQLQDGRVVW-DGLVVDVTDLK 275 Query: 419 RTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHI-KPNWQVWYE 477 R E+ ++ + + + +G WE+EL +W K++F+L+ P + +PN+Q + Sbjct: 276 RVEETLRKSEALLEESQQVARLGNWEFELATGKITWSKQLFDLFNRDPELLEPNYQENLQ 335 Query: 478 CVLPEDRQHAEKVIRDSLQSRSPFKLEFRI-TVKDGIRHIRALANRVLNKEGEVERLLGI 536 PED + ++ + ++L R + +I + + N +G+V RL G Sbjct: 336 LYCPEDAGKLAQATERAMSTGESYQLILRASPIYGSTIYIEGIGHAEFNADGKVIRLYGT 395 Query: 537 NMDMTEVKQLNEALFQEKERLHI---------TLDSIGEAVVCIDMAMKITFMNPVAEKM 587 D+TE + Q +E L + +G + +I + ++ Sbjct: 396 AQDVTERQAALNKRKQAEEELRRSETLLATAQKIAHLGSWEWHLGSEKQI--WSAETFRI 453 Query: 588 SGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYS 647 G E++ + + D L ++ A + + + + G + Sbjct: 454 FGLNPAESVPTQATFLQMLYPEDRPVLQRHLLQAIANGNPFNLEYRIVQPDGSLRYLESR 513 Query: 648 ITPLSTLDGSNIGSVLVIQDVTESRKML-----RQLSYSASHDALTHLANRAS 695 G + I D+TE ++ ++ Y A + T R Sbjct: 514 AEVAYDTQGKTVRLYGAILDITERKQAEIALKQSEIRYRAIVEDQTEFIARYL 566 >UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax=cellular organisms RepID=Q607T2_METCA Length = 1346 Score = 713 bits (1842), Expect = 0.0, Method: Composition-based stats. Identities = 159/731 (21%), Positives = 293/731 (40%), Gaps = 27/731 (3%) Query: 369 GEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLM 428 G IN Y+ E+ +++ + +V L +++ + + + E +R+E ++ Sbjct: 611 GAINLYAGERGFFSED--IVAVLDTMAM------DVSFALDILARDAERERSEMRLRESE 662 Query: 429 ERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAE 488 ER LA + + IW + ++ + W E + PEDR Sbjct: 663 ERFRLAANSAPVLIWMGDTARGCTFFNDMWLNFTGRSLEYELG-DGWLEGMHPEDRSRWI 721 Query: 489 KVIRDSLQSRSPFKLEFRITVKD-GIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLN 547 + +R PF++E+R+ +D R I A + GE +G +D+++ K+ + Sbjct: 722 CAYSAAFDARKPFEIEYRLRRRDGEYRTILGKATPRFDAGGEFIGYIGSCIDISDRKKGD 781 Query: 548 EALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHIT 607 E+L +++ E+++ D I +NP M+G++ EEA+G + Sbjct: 782 ESLL----LAGKVFEAVRESIIVTDANRVIVAVNPAFSDMTGYSPEEAVGRTPAFLQSGR 837 Query: 608 FGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQD 667 G ++ A + + + ++G + V +I + G+ + + V D Sbjct: 838 HGK--EYYAAMWRAVDQEGSWQGEFWNRRKNGELFAVLETIVTVRDETGAMVNYIGVAAD 895 Query: 668 VTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAV 727 ++ ++ + + A +D L+ L NR ++ L + A+VF+D+D FK V Sbjct: 896 ISSLKEAEEHIHHLAYYDPLSALPNRRYLMERAEYALALAERRKEELAVVFLDVDHFKDV 955 Query: 728 NDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISA 787 NDS GH GD LL +A+ + R +D +ARLGGDEF LLLPD ++ +A +I++A Sbjct: 956 NDSLGHQVGDELLVRVATQIKEFTRETDTVARLGGDEFALLLPDLGRDAVSQVADKILAA 1015 Query: 788 VNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQ 847 + F G+ V S GI+L + ++ AD A Y +K GR + Y+P Sbjct: 1016 LRK-PFEHSGQTFAVTGSIGISLYPHDGTDFETLLRNADTAMYHAKQQGRNQFRFYDPGM 1074 Query: 848 AAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCE-GEIIDE 906 R + L E I +L + + +L W ++ Sbjct: 1075 NVDILARLTV-LSELREAIPAGELRTFFQPEID--LANGTLVGAEALVRWQHPTRGLLSP 1131 Query: 907 QTFRRSFSDPALSHALDRRVFHEFFQQAAKA--VASKGISISLPLSVAGLSSATLVNDLL 964 F L A+ V + + A+ I++ + L+ LV + Sbjct: 1132 DQFIPVAESNDLIIAISDWVLEDTCRHLAQWKKADQAPITVGVNLAARHFRDPRLVPRVK 1191 Query: 965 EQLENSPLPPRLLHLIIPAEAILD-HAESV---QKLRLAGCRIVLSQVGRDLQIFNSLKA 1020 L +P L L + +LD A+++ Q+L GC + + G + LK Sbjct: 1192 SLLCRYGVPGSSLQLELTESTLLDADAQTMIVLQELIALGCSLSIDDFGTGYSSLSYLKN 1251 Query: 1021 NMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVD 1080 L +D ++ + D + + LG+K IA V L G D Sbjct: 1252 LPIATLKIDQSFVRDIAFDADDRTISGTVVALGHSLGLKVIAEGVETEEQRRILLEQGCD 1311 Query: 1081 LIYGEVIADAQ 1091 G + + Sbjct: 1312 FGQGYLFSRPL 1322 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 46/275 (16%), Positives = 97/275 (35%), Gaps = 13/275 (4%) Query: 284 TMVMYAFRAERKH----ISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQ 339 + + A AER+ + ESE FR A + + + + T N F G S Sbjct: 641 ALDILARDAERERSEMRLRESEERFRLAANSAPVLIWMGDTARGCTFFNDMWLNFTGRSL 700 Query: 340 EELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRH 399 E G + + PED ++ + + +E R R+G+ L + Sbjct: 701 EYELGDGWLEGMHPEDRSRWICAYSAAFDAR-KPFEIEYRLRRRDGEYRTILGKATPRFD 759 Query: 400 TDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMF 459 G + +I DI++ K+ + + + EA I + I + + Sbjct: 760 AGGEFIGYIGSCIDISDRKKGD----ESLLLAGKVFEAVRESIIVTDANRVIVAVNPAFS 815 Query: 460 ELYEIPPHIK-PNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRH-IR 517 ++ P + + +A + ++ ++ EF K+G + Sbjct: 816 DMTGYSPEEAVGRTPAFLQSGRHGKEYYA--AMWRAVDQEGSWQGEFWNRRKNGELFAVL 873 Query: 518 ALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQ 552 V ++ G + +G+ D++ +K+ E + Sbjct: 874 ETIVTVRDETGAMVNYIGVAADISSLKEAEEHIHH 908 Score = 79.5 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 60/151 (39%), Gaps = 5/151 (3%) Query: 286 VMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGL 345 + A AE++ S F + Y+ + L + + + N GYS+EEL G+ Sbjct: 344 MQAALEAEKERADLS-RRFEYFVRYANDAILLADRDHRIVDVNDRALDLYGYSREELAGM 402 Query: 346 TFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPL 405 T + + + ++++ ++ + E + ++G V L+V + Sbjct: 403 TLADVVAGDVEGVEHGRLDEALARGGGVW--ESVHTRKDGVPVPVELSVRSISVEG--SD 458 Query: 406 YFIAQIEDINELKRTEQVNQQLMERITLANE 436 + A + D+ E KR E + +L + Sbjct: 459 FVQAIVRDVTERKRIELALARQKNLYSLLAQ 489 Score = 69.5 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 67/160 (41%), Gaps = 15/160 (9%) Query: 541 TEVKQLNEALFQEKER------LHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEE 594 +E + AL EKER + +A++ D +I +N A + G+++EE Sbjct: 339 SERHHMQAALEAEKERADLSRRFEYFVRYANDAILLADRDHRIVDVNDRALDLYGYSREE 398 Query: 595 ALGVPLLTVL--HITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLS 652 G+ L V+ + ++G L E + +R + V + G V S+ +S Sbjct: 399 LAGMTLADVVAGDVEGVEHGRLDEAL-----ARGGGVWESVHTRKDGVPVPVELSVRSIS 453 Query: 653 TLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLAN 692 + +++DVTE +++ L+ + +L N Sbjct: 454 VEGSDFVQ--AIVRDVTERKRIELALARQKNLYSLLAQTN 491 Score = 47.9 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 74/233 (31%), Gaps = 8/233 (3%) Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQV 474 E+ L R I + I + R +LY + Sbjct: 345 QAALEAEKERADLSRRFEYFVRYANDAILLADRDHRIVDVNDRALDLYGYSREELAGMTL 404 Query: 475 WYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLL 534 V+ D + E D +R E T KDG+ L+ R ++ EG + + Sbjct: 405 --ADVVAGDVEGVEHGRLDEALARGGGVWESVHTRKDGVPVPVELSVRSISVEGS-DFVQ 461 Query: 535 GINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEE 594 I D+TE K++ AL ++K + + V + +A + G+ Sbjct: 462 AIVRDVTERKRIELALARQKNLYSLLAQTNQIIVRHTSEQELFDSVCRIAIRNGGFLFA- 520 Query: 595 ALGV----PLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYD 643 +G+ V +GD+ + ++ + + + +G Sbjct: 521 WIGMIENETGDLVPVARYGDDAGYVGRLHLSRADTAHHHGPTRMAVAAGHHVI 573 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 713 bits (1841), Expect = 0.0, Method: Composition-based stats. Identities = 184/853 (21%), Positives = 328/853 (38%), Gaps = 45/853 (5%) Query: 261 RTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMA--LV 318 YL H +L L L + ER ++ + A+ S + + + Sbjct: 237 NDYLSKHPGYLHQLPATLEK---AWSLTQLERERANLRAASERLALALATSPVILYSRRL 293 Query: 319 GTEGQ---WLQTNKALCQFLGYSQE-ELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTY 374 G + + W+ N + + LGYS L+ + PED L + +L G Sbjct: 294 GPDERPLTWISEN--IARLLGYSPTLALQPGWWNSRLHPEDREAALDWLRELDRG--GAM 349 Query: 375 SMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLA 434 R + G V W V+L+ GT DI K EQ+ + + + Sbjct: 350 VHAYRLIDAQGRVRWIQDEVTLLETDGGTTHEATGAWHDITATKTGEQMRETRLAVLDAL 409 Query: 435 NEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPN-WQVWYECVLPEDRQHAEKVIRD 493 + + E+ + +RM + I + + E +PE +D Sbjct: 410 IDKHSLTDILGEIATRL----ERMEPDMRVSIQIGSDGPHLPAERTVPERPADWVAPFKD 465 Query: 494 SLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQE 553 ++ + + ++ A +E E + +T V+ Sbjct: 466 GAG---------QMLGRLFVHYVEPRAPTPTERELIDECACIAGLAVTRVRADTRL---- 512 Query: 554 KERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGP 613 + +S E V+ D+ +I +N ++SG+++ E LG + + + Sbjct: 513 -RQAATVFESTREGVIITDLEGRILDVNRAFTEISGYSEPEVLGRNPSLLR--SNRQDHA 569 Query: 614 LMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRK 673 + ++ + + + ++ +SG Y +I ++ G V V+ D+++ ++ Sbjct: 570 FYQAMWHSLKTTGHWQGEIWNRRKSGELYPQILTINTVADSQGRPSHYVGVMTDISQLKQ 629 Query: 674 MLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGH 733 +L + +D LT+L NR + +L L+ + R A++F+DLDRFK VNDS GH Sbjct: 630 SEARLEHLVHYDPLTNLPNRRLVQSRLEHALERADRQGGRVAVLFVDLDRFKTVNDSLGH 689 Query: 734 AAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN-VESARFIATRIISAVNDYH 792 +GD LL LA + +R D LARLGGDEF +LL + E A +A ++S + Sbjct: 690 PSGDVLLELLARRLSERVREDDTLARLGGDEFLVLLENLQRPEDAAAVAESLLSLLQQPF 749 Query: 793 FIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHS 852 + G+ VGAS GI+L D+ H +++ AD+A Y +K GR Y P Sbjct: 750 HLPNGQELYVGASIGISLYPDDGHTVTDLIQHADVAMYQAKEEGRNTYRFYTPSLTQTAR 809 Query: 853 ERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEG-EIIDEQTFRR 911 ER + R + + ++ R + R + +L W ++ F Sbjct: 810 ERLGLEA-RLHRALASEEFVLHYQAQIDMR--DGRLIGCEALVRWHSATEGLVAPDRFIP 866 Query: 912 SFSDPALSHALDRRVFHEFFQ--QAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLEN 969 + L L V + Q+ +A +++++ LS L S LV + L Sbjct: 867 LAEETGLIVPLGEWVLRQACADCQSWRARGLTDLTVAVNLSGRQLRSPDLVERVTRVLRE 926 Query: 970 SPLPPRLLHLIIPAEAILDH----AESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADY 1025 + LP L L + I+D E ++ L+ G R+ + G LK D Sbjct: 927 TGLPAERLKLELTESMIMDQREQALERLRALKALGVRLSIDDFGTGYSSLAYLKRLPIDE 986 Query: 1026 LLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGE 1085 L +D + ++ + D + I A+ L + IA V P D L G G Sbjct: 987 LKIDRDFVRDIPEDSSDMEIAATIIAMARNLRLNVIAEGVETPEQCDFLIRQGCTAGQGY 1046 Query: 1086 VIADAQPLDLLVN 1098 + P + Sbjct: 1047 LFGRPLPAEAFAQ 1059 >UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=2 Tax=Proteobacteria RepID=Q1GXZ6_METFK Length = 1238 Score = 713 bits (1841), Expect = 0.0, Method: Composition-based stats. Identities = 180/882 (20%), Positives = 347/882 (39%), Gaps = 77/882 (8%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + R + S+ R ++ G+A+ +GQ+L N A C+ +GYS++EL+ + Sbjct: 371 VRQRRMVEMELQSSQEQVRLTFHSASAGIAMTSVDGQFLLVNPAFCEIVGYSEDELKKMH 430 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 + L + + + L+ G+I+ +EKRY ++G VW ++ SL++ DG+P Sbjct: 431 CRDLNDGRNELDAWKNRQWLLEGKIDRSVVEKRYTTKSGRSVWVRISASLIKGPDGSPRN 490 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP 466 I +E+I + KR E + Q+ +R L A G + + L + + Sbjct: 491 LIKVVENIEQQKRQETL--QVEQRHLLERIAAGAVLDDVLLATVTLL--EEQYPDLMFSI 546 Query: 467 HIKPNWQVWYECV---LP------------------------EDRQHAEKVIRDSLQSRS 499 + + + LP E R I+ L R+ Sbjct: 547 MLLDKANAFARGIALRLPKRYLDKLKGLQIGPAAGSCGTAAYERRTVVVADIQQDLLWRN 606 Query: 500 PFKLEFRITVK------------DGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLN 547 L R ++ + + V E L+ + + Sbjct: 607 YRDLARRFGLRACWSMPILSSNQQVLGTFAVYSREVRVPEQREMELVSACSHIAGIAIER 666 Query: 548 EALFQEKERLHITLDSIGEAVVCIDMAM------KITFMNPVAEKMSGWTQEEALGVPLL 601 ++ + L ++ + + V+ + +I F+N E++ G+T EE LG Sbjct: 667 HHSEEQLKLLETSIARLNDIVLIAEADSEGKQNPRIIFVNKAFERLMGYTAEEVLGKDPG 726 Query: 602 TVLHITFGDNGPLMENIYSA---DTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSN 658 + ME ++ ++ ++V + ++G + I P++ G Sbjct: 727 FLDGPNTQ-----MEELWRVKALLKQGESVRTELVNYRKNGEEIWLEMDILPIANSAGVF 781 Query: 659 IGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVF 718 V V +D+TE + ++ + A +D LT+L NR +L L + AL+F Sbjct: 782 THWVSVQRDITERKAAESRIQHLAFYDMLTNLPNRLLLLDRLEQALLNSMRLKRSGALLF 841 Query: 719 IDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN----- 773 +DLD FK +ND+ GH GD LL ++A +L+ +R +D +ARLGGDEF +++ + + Sbjct: 842 LDLDNFKTLNDTHGHDFGDMLLEQVAQRLLNSVRITDTVARLGGDEFVVVVENLSEQGCN 901 Query: 774 -VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLI-DDNNHQAAEVMSQADIACYA 831 + A +A +I+ A++ F G H S G+ L ++ E++ +AD+A Y Sbjct: 902 AAQEASLVADKILLALSQ-PFRLSGYEHYSSCSIGVALFCNEQQVTVDELLKRADLAMYE 960 Query: 832 SKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWL 891 +K GR ++P A ++RAAM D + + ++ +++ + + L Sbjct: 961 AKAAGRNTFRFFDPAMQALITKRAAMEEDLR-QALRRDEMRLYYQPQVD---SQGSLLGA 1016 Query: 892 ISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK---GISISL 947 +L W + ++ F + L + V Q G+ +S+ Sbjct: 1017 EALVRWEHPQQGLLSPAAFIELAEETGLILPIGEWVLRTACMQLVAWAGRPETAGLVLSV 1076 Query: 948 PLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRI 1003 +S L ++ + L+ + P+ L L + ++++ E + L+ G Sbjct: 1077 NVSARQLHQHDFIDRVFSILKETGANPQSLKLELTESTLVENIEEMITKMNILKAMGVGF 1136 Query: 1004 VLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAG 1063 + G LK L +D +V + D ++ I LG++ +A Sbjct: 1137 SMDDFGTGYSSLAYLKRLPLSQLKIDRSFVRDVLVDSNDASIVQTIIALGHGLGIEVVAE 1196 Query: 1064 PVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNSSYFAIN 1105 V L G G + QP + L A+N Sbjct: 1197 GVESWEQQQFLEKHGCLEYQGYLFGRPQPAEQLEREFGLAVN 1238 Score = 77.2 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 22/146 (15%), Positives = 61/146 (41%), Gaps = 3/146 (2%) Query: 531 ERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGW 590 ER ++ ++ + + + L +E++ +T S + + + +NP ++ G+ Sbjct: 362 ERTQALHEEVRQRRMVEMELQSSQEQVRLTFHSASAGIAMTSVDGQFLLVNPAFCEIVGY 421 Query: 591 TQEEALGVPLLTVLHITFGDNG-PLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSIT 649 +++E + + + + + RS +E+ +SG S V S + Sbjct: 422 SEDELKKMHCRDLNDGRNELDAWKNRQWLLEGKIDRSVVEKRYT--TKSGRSVWVRISAS 479 Query: 650 PLSTLDGSNIGSVLVIQDVTESRKML 675 + DGS + V++++ + ++ Sbjct: 480 LIKGPDGSPRNLIKVVENIEQQKRQE 505 >UniRef50_B9YZ47 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YZ47_9NEIS Length = 953 Score = 712 bits (1839), Expect = 0.0, Method: Composition-based stats. Identities = 219/815 (26%), Positives = 367/815 (45%), Gaps = 27/815 (3%) Query: 309 EYSAIGMALVGTEGQWLQTNKALC------QFLG----YSQEELRGLTFQQLTWPE--DL 356 + + L + ++A+ + LG +Q +G+ L+ + +L Sbjct: 115 DDIPELIWLFLRFRRVSYLDQAIAYWTEGDRLLGELDQVAQRLRQGMANGTLSPAQAGEL 174 Query: 357 NKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLA-VSLVRHTDGTPLYFIAQIEDIN 415 +Q++ + ++ N +S G V+ LLA V+LV T + + I Sbjct: 175 KLQIQEINREVTPLENAFS---NVLAEGGRVIQRLLAAVNLVAATVLILFALLRTRQLIR 231 Query: 416 ELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPH-IKPNWQV 474 + + EQ + ER+ LA GIW+W + + R + + H ++ + Sbjct: 232 QSELFEQALGESEERLALAVNGSDYGIWDWNIAEGSVYYSPRFKAMLGLAEHELEDSIGA 291 Query: 475 WYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLNKEGEVERL 533 ++ + P+D + L + +E+R+ ++G R RA + + G R+ Sbjct: 292 FWAHLHPDDTVPTRDSLERHLAGEGGYDVEYRLRTRNGGYRWFRARGQALRDAAGRAVRM 351 Query: 534 LGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQE 593 G D+T+ K AL E+ER +TL SIG+AV+ +D ++ ++NPVAE++ G Sbjct: 352 SGSIFDITDRKLAEGALHAEQERAQVTLASIGDAVITLDGGGQVDYLNPVAEQLIGHPLA 411 Query: 594 EALGVPL---LTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITP 650 +A G L +L P+ + + ++++L G V P Sbjct: 412 QAHGRRLGALCCLLEEGLSPERPVRLEPLLNEVAPPGAGRNLLLERHDGSRVSVCMVSAP 471 Query: 651 LSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNST 710 + G G VLV D+T R + LS+ ASHDALT L NR FE++L LL+ Sbjct: 472 IFDSQGGVSGKVLVFHDMTRERLYIESLSWQASHDALTGLTNRHEFERRLTRLLEATVGR 531 Query: 711 HQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLP 770 Q H L+++DLD+FK VND+ GHAAGD LLR++ L+ LR D LARLGGDEFG+LL Sbjct: 532 QQYHVLMYLDLDQFKVVNDTCGHAAGDELLRQVCVLLSQQLREGDTLARLGGDEFGVLLQ 591 Query: 771 DCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACY 830 +C E+A +A ++ V D HF W G+ + AS G+ I EVM AD+ACY Sbjct: 592 NCPPEAALPVAEKLRQTVCDLHFSWNGQPFAISASIGVVHISGVPTTLKEVMRAADVACY 651 Query: 831 ASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQW-RMIKENQLMMLAHGVASPRIPEARNL 889 +K GR R +Y A M ++ R +++++ + A +A A Sbjct: 652 MAKEKGRNRAQLYAADDAELTVRYGEMEWVQRLHRALEDDRFRLYAQTIAPLGEGSAAPH 711 Query: 890 WLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQ-AAKAVASKGISISLP 948 + + L+L G ++ F + L +DR V AA+ + ++ Sbjct: 712 FELLLRLLDEYGMLVPPSAFIPAAERYNLMATIDRWVVSTALAMLAARTSPGSEWTCAIN 771 Query: 949 LSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH----AESVQKLRLAGCRIV 1004 LS A L + L +L S + P L + + + + E +++LR GCR Sbjct: 772 LSGASLCDDDFLGFLRAELAGSGIDPAHLCFEVTETSAIANLACATEFMRELRQLGCRFS 831 Query: 1005 LSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGP 1064 L G + F LK D+L +DG ++ + +D ++ +I +G +TIA Sbjct: 832 LDDFGAGMSSFGYLKHLPVDFLKIDGGFVKDMLDDPVDHAMVEVINHIGHVMGKQTIAEF 891 Query: 1065 VVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNS 1099 P +++ L +GVD G +A PL ++ Sbjct: 892 AEHPGILEALKRMGVDYAQGYGVARPLPLAEVLAQ 926 >UniRef50_C6ME82 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6ME82_9PROT Length = 1136 Score = 712 bits (1838), Expect = 0.0, Method: Composition-based stats. Identities = 181/854 (21%), Positives = 336/854 (39%), Gaps = 57/854 (6%) Query: 292 AERKHISESETHFRNAMEYSAIGMA---LVGTEGQWLQTNKALCQFLGYSQEELRGLTFQ 348 ER + ++ + + S + +VGT Q + ++ + + LGY+QEE+ + Sbjct: 266 RERISLKKTSLRLSDLLAASPTILYNLRVVGTTFQLVWVSENIERLLGYTQEEVMAEGWW 325 Query: 349 QL-TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYF 407 L P+D L +L++ + + + R +RNG VW + LVR +G PL Sbjct: 326 NLHVHPDDREAALTHQSELLA--VGQLTYDYRLLHRNGQSVWIHDELRLVRSINGKPLEV 383 Query: 408 IAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMF-ELYEIPP 466 + D++E KRTE + Q + L + + ++ + S + M + + Sbjct: 384 VGAWLDVSEHKRTELIRQAHQSALNLIVANQPLPVILKDIAQRLESINPEMLVSILLLDQ 443 Query: 467 HIKPNWQVWYECVLPEDRQHAEKVIRDSLQ----SRSPFKLEFRITVK-DGIRHIRA--- 518 H + P+D A ++ S ++ E I D + ++ Sbjct: 444 HTGRLKHGEAPSL-PDDYNAAIDQLKIGEGIGSCGTSAWRGEPVIVADIDHHPYWQSYLE 502 Query: 519 ----------LANRVLNKEGEVERLLGINMD------------------MTEVKQLNEAL 550 N G+V I +T + Sbjct: 503 LTRKANLHACWTIPFKNDAGKVLGTFAIYHRTPREPSQADLGLINEFALLTALAVQKVYA 562 Query: 551 FQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGD 610 + ++ +S E VV D+ +I +N +++G+++E+ LG + + Sbjct: 563 AESLKQAAAVFESTREGVVITDLQPRIVAINRAYAEITGYSEEQVLGKNPRIIK--SGRH 620 Query: 611 NGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTE 670 + + ++++ T +V RSG Y +I+ + V V D+T+ Sbjct: 621 DKLFYQAMWASLTKAGYWRGEVWNRRRSGDIYPQWLTISTVFNDRNEPCNYVGVFTDITQ 680 Query: 671 SRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDS 730 ++ +L++ A +DALT L NR + +L ++ + A +++DLDRFK VNDS Sbjct: 681 IKQSEARLAHLAHYDALTGLPNRLLVQSRLHHAIERTLRHGNQIAALYLDLDRFKNVNDS 740 Query: 731 AGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVN 789 GH GD LL LA + LR D LARLGGDEF ++L D + +A +I + Sbjct: 741 LGHPIGDELLVMLALRLKKRLREEDTLARLGGDEFLVVLEDIKDSNEPAMVAQTLIDLLA 800 Query: 790 DYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAA 849 + G + S GI+L + + E++ AD+A Y +K GR + + Sbjct: 801 TPFSLPSGHEIFINTSIGISLFPTDANSVTELIQHADMAMYLAKQEGRNTYRYHTDALSI 860 Query: 850 AHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGE-IIDEQT 908 A +ER + + + + + ++ + R + + + + +L W + ++ Sbjct: 861 AANERLVLETQLR-QALSAGEFVLHYQPLIDAR--KGQVMGVEALVRWQPPDKAMVSPGK 917 Query: 909 FRRSFSDPALSHALDRRVFHEFFQQAAKAVAS--KGISISLPLSVAGLSSATLVNDLLEQ 966 F + L L V Q + + + +++ LSV S LV + + Sbjct: 918 FIPIAEETGLIVPLGEWVLRTACAQGRAWMDADFPPLVMAVNLSVRQFQSENLVELIRQV 977 Query: 967 LENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANM 1022 LE + LP L L + ++HAE ++ L+ G R+ + G LK Sbjct: 978 LEETKLPAACLELELTESMFMEHAEQSIEILKTLKSLGVRLSIDDFGTGYSSLTYLKRFP 1037 Query: 1023 ADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLI 1082 D L +D + + D + I A+ L + +A V +D L+ G D Sbjct: 1038 IDKLKIDQSFVHGLAYDPNDREIAATIIAMARNLKLDVLAEGVESEQQLDILNQHGCDYY 1097 Query: 1083 YGEVIADAQPLDLL 1096 G + P L Sbjct: 1098 QGYLFHRPVPAQEL 1111 Score = 79.1 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 61/150 (40%), Gaps = 1/150 (0%) Query: 285 MVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRG 344 ++ A ++ + +ES E + G+ + + + + N+A + GYS+E++ G Sbjct: 550 ALLTALAVQKVYAAESLKQAAAVFESTREGVVITDLQPRIVAINRAYAEITGYSEEQVLG 609 Query: 345 LTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTP 404 + + Q + ++ + + E R+GD+ L +S V + P Sbjct: 610 KNPRIIKSGRHDKLFYQAMWASLT-KAGYWRGEVWNRRRSGDIYPQWLTISTVFNDRNEP 668 Query: 405 LYFIAQIEDINELKRTEQVNQQLMERITLA 434 ++ DI ++K++E L L Sbjct: 669 CNYVGVFTDITQIKQSEARLAHLAHYDALT 698 Score = 75.7 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 49/336 (14%), Positives = 106/336 (31%), Gaps = 33/336 (9%) Query: 411 IEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKP---NIFSWDKRMFELYEIPPH 467 ++ EL R ++ R++ A ++ + + + + L Sbjct: 258 VQHQAELARERISLKKTSLRLSDLLAASPTILYNLRVVGTTFQLVWVSENIERLLGYTQE 317 Query: 468 IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD-GIRHIRALANRVLNK 526 W V P+DR+ A + L ++R+ ++ I V + Sbjct: 318 EVMAEGWWNLHVHPDDREAALTHQSELLAVGQ-LTYDYRLLHRNGQSVWIHDELRLVRSI 376 Query: 527 EGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEK 586 G+ ++G +D++E K+ + L++ + + V+ D+A ++ +NP + Sbjct: 377 NGKPLEVVGAWLDVSEHKRTELIRQAHQSALNLIVANQPLPVILKDIAQRLESINP---E 433 Query: 587 MSG--WTQEEALGVPLLTVLHITFGDNGPLMENIYSADT----SRSAIEQDVVLHCR-SG 639 M ++ G D ++ + + SA + V+ Sbjct: 434 MLVSILLLDQHTGRLKHGEAPSLPDDYNAAIDQLKIGEGIGSCGTSAWRGEPVIVADIDH 493 Query: 640 GSYDVH-------------YSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDA 686 Y ++I P G +G+ + T L Sbjct: 494 HPYWQSYLELTRKANLHACWTI-PFKNDAGKVLGTFAIYH-RTPREPSQADLGLINEFAL 551 Query: 687 LTHLA-NRASFEKQLRILLQTVNSTHQRHALVFIDL 721 LT LA + + L+ ST + + DL Sbjct: 552 LTALAVQKVYAAESLKQAAAVFESTREGVVIT--DL 585 >UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STH5_PSYIN Length = 962 Score = 712 bits (1837), Expect = 0.0, Method: Composition-based stats. Identities = 149/683 (21%), Positives = 277/683 (40%), Gaps = 20/683 (2%) Query: 420 TEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECV 479 + ++ G+G + K I++ + + EL+ I + + W V Sbjct: 262 QRAELIKQTYKLKRYQRIAGLGSYLLNFKTGIWTSSEILDELFGIDQSYNHSTEGWTLIV 321 Query: 480 LPEDRQHAEKVIR-DSLQSRSPFKLEFRITV--KDGIRHIRALANRVLNKEGEVERLLGI 536 P+DR + ++ + L PF E+RI IR + L + +G +++G Sbjct: 322 HPDDRIKMDDYLKNEVLAKGKPFDKEYRIVRQTDQSIRWLHGLGKLEFDNDGLPVKMVGT 381 Query: 537 NMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEAL 596 D+TE K+ +++L + L + ++ ++V D+ KI ++N + K++G++++E L Sbjct: 382 VQDITEQKRASDSLLK----LSLAVEQSPNSIVITDLDGKIEYVNNMFIKVTGYSRDEVL 437 Query: 597 GVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDG 656 G + + +++ T +++ + Y +ITP+ DG Sbjct: 438 GQNPRILKSGKTPQTT--FKEMWAHLTRGDIWHGEIINRRKDKSIYIESATITPVKQADG 495 Query: 657 SNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHAL 716 V + +D+TE +K A D LT L NR + Q++ L S HQ + Sbjct: 496 KITNYVAIKEDITEKKKAEAYTENLAYFDQLTGLPNRRMLQAQVKYRLNMAQSNHQPLTV 555 Query: 717 VFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVES 776 +F+DLD FK +NDS GH GD +L ++A + +R D ++RLGGDEF +L P+ + + Sbjct: 556 MFLDLDNFKNINDSLGHTVGDQVLIKIAKRIKKAIREVDTVSRLGGDEFIMLFPNTDANA 615 Query: 777 ARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGG 836 A IAT +I ++ + E + S GI + ++ + ++ A+ A Y KN Sbjct: 616 AMHIATTLIQEISKAS-VVEHNELTITPSIGIAIYPNDGNDFKTLLKNAETAMYRVKNDS 674 Query: 837 RGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKL 896 R P+ + S + + +K N+L + S + + +L Sbjct: 675 RNGFHFVTPEMQLSASRNLQLE-NALRHALKRNELQLYYQPQIS--TSNGQIIGAEALLR 731 Query: 897 W-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK--GISISLPLSVAG 953 W E +I F + V +Q + + I++ LSV Sbjct: 732 WHHPELGMISPAEFIPIAESSGQIIEIGEWVLRTAIRQTKNWMDDGFTPMIIAVNLSVVQ 791 Query: 954 LSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVG 1009 L+ + + L LP L L + + ES + G R+ + G Sbjct: 792 FRQKNLLTLITDILAEVQLPNEYLELELTEAVTMHDPESVINVMNTFHEQGIRMSIDDFG 851 Query: 1010 RDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPL 1069 + LK L +D ++ + D +++ I A LG++TIA V Sbjct: 852 TGYSSLSYLKKFKVYKLKIDQSFIRDISNDPDDRAIVSAIIDMASNLGLQTIAEGVETAE 911 Query: 1070 VMDTLSGIGVDLIYGEVIADAQP 1092 + L G + G + P Sbjct: 912 QLAFLRLHGCHEVQGYYFSKPLP 934 Score = 85.7 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 58/143 (40%), Gaps = 1/143 (0%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 E+K S+S A+E S + + +G+ N + GYS++E+ G + L Sbjct: 386 TEQKRASDSLLKLSLAVEQSPNSIVITDLDGKIEYVNNMFIKVTGYSRDEVLGQNPRILK 445 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 + +++ ++ + + E ++ + ++ V+ DG ++A Sbjct: 446 SGKTPQTTFKEMWAHLT-RGDIWHGEIINRRKDKSIYIESATITPVKQADGKITNYVAIK 504 Query: 412 EDINELKRTEQVNQQLMERITLA 434 EDI E K+ E + L L Sbjct: 505 EDITEKKKAEAYTENLAYFDQLT 527 Score = 79.5 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 117/338 (34%), Gaps = 33/338 (9%) Query: 225 WSAVRLPRMEAFLIFLTTVMMVSLMMAADPSL-LATPRTYLMSHMPWLPFLLILLPANIM 283 W + ++ + + M +++ + +L+ + ++ L+ LL + + Sbjct: 195 WKKDIFEYWLTLSLIVSVISQIVFMSSSEVLFDIEFDAAHLLKKISYILVLIGLLKS--I 252 Query: 284 TMVMYAFRAERKHISESETHFRNAMEYSAIGMALVG-TEGQWLQTNKALCQFLGYSQEEL 342 ++ +R + + + + +G L+ G W + L +EL Sbjct: 253 YKLVLYGVIQRAELIKQTYKLKRYQRIAGLGSYLLNFKTGIWTS-----SEIL----DEL 303 Query: 343 RGLT---------FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNR-NGDVVWALL 392 G+ + + P+D K ++ + + + E R + + + W Sbjct: 304 FGIDQSYNHSTEGWTLIVHPDDRIKMDDYLKNEVLAKGKPFDKEYRIVRQTDQSIRWLHG 363 Query: 393 AVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIF 452 L DG P+ + ++DI E KR + +++LA E I +L I Sbjct: 364 LGKLEFDNDGLPVKMVGTVQDITEQKRASD----SLLKLSLAVEQSPNSIVITDLDGKIE 419 Query: 453 SWDKRMFELYEIPPH--IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVK 510 + ++ + N ++ P Q K + L + E K Sbjct: 420 YVNNMFIKVTGYSRDEVLGQNPRILKSGKTP---QTTFKEMWAHLTRGDIWHGEIINRRK 476 Query: 511 DGIRHIR-ALANRVLNKEGEVERLLGINMDMTEVKQLN 547 D +I A V +G++ + I D+TE K+ Sbjct: 477 DKSIYIESATITPVKQADGKITNYVAIKEDITEKKKAE 514 >UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WZ79_METML Length = 1250 Score = 711 bits (1836), Expect = 0.0, Method: Composition-based stats. Identities = 173/844 (20%), Positives = 337/844 (39%), Gaps = 40/844 (4%) Query: 280 ANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVG-TEGQWLQTNKALCQFLGYS 338 + + + I ++E++ N + + + + N A+ + G S Sbjct: 416 SRGTVQDVTERQNSEALIRKTESYLTNILNSVEEVIWTASAPDFRVNHVNAAIEKLCGLS 475 Query: 339 QEELRG--LTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSL 396 Q+ L + L P+D + ++ + E ++ ++E R +G V W + + Sbjct: 476 QQALIDDIEVWINLIHPDDCAQAKLAMKAVF--EQSSVALEYRIVLADGTVRWVSDSRHV 533 Query: 397 VRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSW-D 455 V G + I D+ + +++ ER+ E I + + + + Sbjct: 534 VYGESGESAELVCVIHDVTAKRLAADADRESKERVIQMLETSPIAVRIATSSGDKVLFAN 593 Query: 456 KRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRH 515 KR EL PP E+ + ++ V+ Sbjct: 594 KRYTELINCPPDAVMGRNPKLYYAHAEEYDALLAQVNSGHAINDKL---IQLIVEGKGPV 650 Query: 516 IRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSI---------GE 566 + R ++ EG +LG D+T++++ +AL + +L+ + Sbjct: 651 WAMASYRPVHYEGTAA-ILGWFYDVTDLRRAQDALLLSEALAKQSLEELKYQKYALDKHA 709 Query: 567 AVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRS 626 V D+ +IT+ N ++SG++ EE LG +L+ + G E +Y + Sbjct: 710 IVAVTDVKGRITYANDKFSEISGYSIEELLGQD-HAILNSGYHPKGYFKE-MYRTVANGQ 767 Query: 627 AIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDA 686 ++ + G Y V +I P DG + + D+T+ + + +Y A +D Sbjct: 768 VWHDEICNRAKDGSLYWVDTTIAPFIGDDGKPQSYISIRTDITQRKAAEDKSNYLALYDP 827 Query: 687 LTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASL 746 LT+L NR +L L + T + AL+F+DLD FK +ND+ GH GD LL+++A Sbjct: 828 LTNLPNRRLLLDRLTHALASAMRTGRGGALLFLDLDHFKTLNDTLGHDVGDLLLQQVAEC 887 Query: 747 MLSMLRSSDVLARLGGDEFGLLLPDCNVES------ARFIATRIISAVNDYHFIWEGRVH 800 + + +R D +ARLGGDEF ++L + + A + +I++ + + ++G + Sbjct: 888 LTACVREGDTVARLGGDEFVVILEGLSEQEVEAAAQAEVVGEKILNKFIE-PYQFKGYEY 946 Query: 801 RVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLD 860 + +S GITL NN ++ E++ QADIA Y +K GR ++ ++P+ R M + Sbjct: 947 HITSSVGITLFGKNNLKSDELLKQADIAMYQAKKLGRNALSFFDPKMQEGIQARVDMEHE 1006 Query: 861 EQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALS 919 + + + +N+ + R + +L W E +I F D + Sbjct: 1007 LR-KALDKNEFQLFYQMQVGL---SDRAVGAEALIRWIHPERGLIPPNEFVSIAEDCGMI 1062 Query: 920 HALDRRVFHEFFQQAAKAVAS---KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRL 976 ++ V Q + S + +++S+ +S A V + + + P L Sbjct: 1063 LSIGAWVIDTACAQLKRWEQSERTRSLTLSVNVSAKQFRQADFVEQVTTAIARHGINPML 1122 Query: 977 LHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGEL 1032 L L + A+LDH E + L+ G R L G L+ L +D Sbjct: 1123 LKLELTESALLDHIEDAVAIMNALKDIGIRFSLDDFGTGYSSLQYLRLLPLYQLKIDRSF 1182 Query: 1033 CANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQP 1092 ++ ++ ++ ++ I A L + IA V + L G G + ++ P Sbjct: 1183 VRDIASSIGNQAIVRTIIAMAHTLNLNVIAEGVETQVQQGILLDSGCMHYQGYLFSEPVP 1242 Query: 1093 LDLL 1096 +D Sbjct: 1243 IDAF 1246 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 68/414 (16%), Positives = 145/414 (35%), Gaps = 20/414 (4%) Query: 276 ILLPANIMTMVMYAFRAERKHISESETHFRNAM----EYSAIGMALVG-TEGQWLQTNKA 330 +L M +++A ER H +S + + + +G + G+ + ++ Sbjct: 280 VLAELAKMQSLLHAHDVERTHAEQSLHRSKALLVEAQHIAQVGSWSLDWLTGELI-WSEE 338 Query: 331 LCQFLGYSQEELRG--LTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVV 388 + Q + F P D + + Y + R +G V Sbjct: 339 IYHIFETDQHQFHANYEAFLNAVHPCDREAVDCAFKASVVSHTP-YEITHRLLLADGSVK 397 Query: 389 WALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELK 448 W + G P Y ++D+ E + +E + ++ +T + IW Sbjct: 398 WVHERGTSDYDAAGNPTYSRGTVQDVTERQNSEALIRKTESYLTNILNSVEEVIWTASAP 457 Query: 449 PNIF-SWDKRMFELYEIPPH-IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFR 506 + + +L + + + +VW + P+D A+ ++ + +S LE+R Sbjct: 458 DFRVNHVNAAIEKLCGLSQQALIDDIEVWINLIHPDDCAQAKLAMKAVFE-QSSVALEYR 516 Query: 507 ITVKD-GIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIG 565 I + D +R + + V + GE L+ + D+T + +A + KER+ L++ Sbjct: 517 IVLADGTVRWVSDSRHVVYGESGESAELVCVIHDVTAKRLAADADRESKERVIQMLETSP 576 Query: 566 EAV-VCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTS 624 AV + K+ F N ++ + +G + + + L+ + S Sbjct: 577 IAVRIATSSGDKVLFANKRYTELINCPPDAVMGRNP-KLYYAHAEEYDALLAQVNSGHAI 635 Query: 625 RSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQL 678 + + L G S P+ + DVT+ R+ L Sbjct: 636 NDKL---IQLIVEGKGPVWAMASYRPVHYE--GTAAILGWFYDVTDLRRAQDAL 684 Score = 42.6 bits (99), Expect = 0.080, Method: Composition-based stats. Identities = 38/285 (13%), Positives = 80/285 (28%), Gaps = 21/285 (7%) Query: 417 LKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFS------WDKRMFELYEIPPHIKP 470 + + + G I + S W +F + I Sbjct: 173 RLKAANMLLDSHYHQAKSKIMGPINETFLMMDRRTLSAVEHAKWVATIFRILFILVAFWS 232 Query: 471 NWQVWYECVLPEDRQHAEKVIRDSL--QSRSPFKLEFRITVKDGIRHIRALANRVLNKEG 528 + +W A + + +L + ++ FR+ D I + + Sbjct: 233 IFYLW----------RAYRALHSTLGASADEVYQHIFRVGAGDFSIPITVKPAQDNSVLA 282 Query: 529 EVERLLGINMDMTEVKQLNEALFQEKERLHITLDSI-GEAVVCIDMAMKITFMNPVAEKM 587 E+ ++ + + E + L + I +D + + Sbjct: 283 ELAKMQSLLHAHDVERTHAEQSLHRSKALLVEAQHIAQVGSWSLDWLTGELIWSEEIYHI 342 Query: 588 SGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYS 647 Q + + + D + ++ S + E L G VH Sbjct: 343 FETDQHQFHANYEAFLNAVHPCDREAVDCAFKASVVSHTPYEITHRLLLADGSVKWVHER 402 Query: 648 ITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLAN 692 T G+ S +QDVTE + + + S+ LT++ N Sbjct: 403 GTSDYDAAGNPTYSRGTVQDVTERQNSEALIRKTESY--LTNILN 445 >UniRef50_A4Y0E0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=23 Tax=Pseudomonas RepID=A4Y0E0_PSEMY Length = 766 Score = 711 bits (1836), Expect = 0.0, Method: Composition-based stats. Identities = 160/699 (22%), Positives = 290/699 (41%), Gaps = 21/699 (3%) Query: 405 LYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI 464 L ++ + +R ER+ LA +A G+W+W+ + L + Sbjct: 57 LLYLVLHRHAQQYRRARLQLTSNEERLRLALDATRDGLWDWDFAAQRVFFSPSYAALLGL 116 Query: 465 PPH-IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD-GIRHIRALANR 522 P + W E + PEDR+ + + Q + +R+ D R + Sbjct: 117 TPQALGDTRDAWAERLHPEDRERVLQALALD-QQYDSYDNVYRLRHADGTYRWFHSRGRL 175 Query: 523 VLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNP 582 + ++ G +R +GI D+T+ + +E+L Q D+ E V+ D +I +NP Sbjct: 176 LRDEGGRPQRFIGIASDITQQRANDESLRQ----AAAVFDATQEGVLVTDPEQRIVHVNP 231 Query: 583 VAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSY 642 +++G++ EE LG + + + ++++ A +R A +V +SG Y Sbjct: 232 AFSRITGYSAEEVLGQHPTLLK--SGRHDAAFYQSLWQALHNRDAWSGEVWNRRKSGEIY 289 Query: 643 DVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRI 702 I + G V V D+T ++ R+L Y A HD L++L NR F +++ Sbjct: 290 PQWQCIRVIHDEHGRISHYVAVFSDITALKRSQRELDYLAHHDPLSNLPNRLLFTERIAH 349 Query: 703 LLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGG 762 L+ S R A++ IDLD FK +N+S GH GD LL+ + + L LARLGG Sbjct: 350 ALERSKSEQLRGAVLLIDLDHFKHINESLGHNVGDLLLKSVGERLQQDLPGGCTLARLGG 409 Query: 763 DEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEV 821 DEFGLL C + A +A ++ + + F + +GAS GI+L D+ +V Sbjct: 410 DEFGLLSETCADAPQAAELAQNLLRCL-EAPFRLDEHELYIGASIGISLFPDDADSVEQV 468 Query: 822 MSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASP 881 + AD A + +K+ GR Y + +R ++ + + ++L + + Sbjct: 469 LRNADSALFKAKSSGREGYAFYVQELTDYARQRVELASSLR-HALDNHELRVFYQPLHD- 526 Query: 882 RIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA--V 938 + + + +L W + +I F D + +D V + Q + Sbjct: 527 -LENGNPVGMEALVRWQHPQRGLIPPAEFIPIAEDNGMIGPIDAWVLEQACGQMMRWNAE 585 Query: 939 ASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQ 994 S +++ +S S L + + L + L P+ L L + AI++ ++ + Sbjct: 586 GSALRFVAVNVSSRLFSRGELDLKVAQVLAETGLSPQQLELEVTESAIMEDPDAALSLLT 645 Query: 995 KLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQ 1054 +LR G R+ + G LK D L LD + ++ D + + Sbjct: 646 RLRALGVRLAIDDFGTGYSSLARLKRLPVDKLKLDQSFVRGLPDDIEDAAIARAVIALGH 705 Query: 1055 RLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPL 1093 LG+ +A + P +D L +G D G P+ Sbjct: 706 SLGLNVLAEGIESPAQVDFLRALGCDYGQGYHFGRPAPV 744 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 49/309 (15%), Positives = 110/309 (35%), Gaps = 14/309 (4%) Query: 255 SLLATPRTYLMSHMPWLPFLLILLPANIMTMVMY----AFRAERKHISESETHFRNAMEY 310 ++L L + + L A ++ +V++ +R R ++ +E R A++ Sbjct: 30 TVLGLSLAQLERLQSLKGLIFVGLTAALLYLVLHRHAQQYRRARLQLTSNEERLRLALDA 89 Query: 311 SAIGMALVGTEGQWLQTNKALCQFLGYSQEEL--RGLTFQQLTWPEDLNKDLQQVEKLIS 368 + G+ Q + + + LG + + L + + PED + LQ + + Sbjct: 90 TRDGLWDWDFAAQRVFFSPSYAALLGLTPQALGDTRDAWAERLHPEDRERVLQAL--ALD 147 Query: 369 GEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLM 428 + ++Y R + +G W L+R G P FI DI + ++ N + + Sbjct: 148 QQYDSYDNVYRLRHADGTYRWFHSRGRLLRDEGGRPQRFIGIASDITQ----QRANDESL 203 Query: 429 ERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAE 488 + +A G+ + + I + + D Sbjct: 204 RQAAAVFDATQEGVLVTDPEQRIVHVNPAFSRITGYSAEEVLGQHPTLLKSGRHD-AAFY 262 Query: 489 KVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVL-NKEGEVERLLGINMDMTEVKQLN 547 + + +L +R + E K G + + RV+ ++ G + + + D+T +K+ Sbjct: 263 QSLWQALHNRDAWSGEVWNRRKSGEIYPQWQCIRVIHDEHGRISHYVAVFSDITALKRSQ 322 Query: 548 EALFQEKER 556 L Sbjct: 323 RELDYLAHH 331 Score = 87.2 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 57/144 (39%), Gaps = 1/144 (0%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 +++ ES + + G+ + E + + N A + GYS EE+ G L Sbjct: 194 TQQRANDESLRQAAAVFDATQEGVLVTDPEQRIVHVNPAFSRITGYSAEEVLGQHPTLLK 253 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 Q + + + + +S E ++G++ + ++ G +++A Sbjct: 254 SGRHDAAFYQSLWQALHNR-DAWSGEVWNRRKSGEIYPQWQCIRVIHDEHGRISHYVAVF 312 Query: 412 EDINELKRTEQVNQQLMERITLAN 435 DI LKR+++ L L+N Sbjct: 313 SDITALKRSQRELDYLAHHDPLSN 336 >UniRef50_B6BGA2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGA2_9PROT Length = 802 Score = 711 bits (1836), Expect = 0.0, Method: Composition-based stats. Identities = 163/792 (20%), Positives = 316/792 (39%), Gaps = 24/792 (3%) Query: 315 MALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKL-ISGEINT 373 + + +L N + +G + G +PE++ Q + L I + Sbjct: 18 IFVKDLNSNYLFVNSTYAKLVGKEATAIIGKNDLDF-FPEEIAFKYQNDDSLVIKNKQII 76 Query: 374 YSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITL 433 ++E +G + +G + DI E ++ ++L ++ Sbjct: 77 DTVESILI--DGKYKTIRTVKKPLYF-NGEVSAVLGIFWDITEFNEEKEHFKKLEYGLSK 133 Query: 434 ANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP-HIKPNWQVWYECVLPEDRQHAEKVIR 492 A E IG WE L N W ++ ++ + P ++ + E + P+D + Sbjct: 134 AQELANIGHWELNLVTNDLFWSDEVYRIFGLKPQEFGATYEAFLEHIHPDDVELVNSSYS 193 Query: 493 DSLQSRSPFKLEFRITVKD-GIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALF 551 DS+ +R + + RI K+ + + + +G V R +G D+T+ K L Sbjct: 194 DSITNRCGYHVTHRIVRKNGEVGFVEERCEHEFDNDGNVLRSIGTVHDITKQKIAQNELM 253 Query: 552 QEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDN 611 E + + VV D I +N K++G+T EE +G+ + + Sbjct: 254 LASEVFSK----MSDGVVITDANQSIIKINESFTKITGYTNEELIGMTPKAF--SSGWHD 307 Query: 612 GPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTES 671 + ++ +++ +S Y +I L DG + + D+++ Sbjct: 308 EAFYKKMWDDIKQNGQWSGEIIDRKKSSERYIAEMNIIALHNDDGILTNYISITNDISKK 367 Query: 672 RKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSA 731 ++ + + A D+LT L NR FE+++ + ++ AL+FID+D FK VND+ Sbjct: 368 KEQEKLIHNLAYFDSLTDLPNRVLFEERVVSRIPFSKRHDKKMALLFIDMDNFKNVNDTL 427 Query: 732 GHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN-VESARFIATRIISAVND 790 GH GD L E+++++ + +R D LARLGGDEF +LL D N + IA +II+A N+ Sbjct: 428 GHFMGDMFLIEVSNIIKNSIREQDTLARLGGDEFTVLLEDINSIMDIVPIAEKIIAAFNN 487 Query: 791 YHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAA 850 + E + G S GI+L D+ E+ AD A Y K G+ ++ Sbjct: 488 -PVLIESKELYTGISMGISLYPDDGKSYNELFKAADTAMYQVKASGKNNFQFFKQSMNEK 546 Query: 851 HSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTF 909 +ER + + I N+L ++ + + R + +L W E +I F Sbjct: 547 ITERLFLE-NSLRNAIGNNELFLVYQPKIN--LETKRVYGMEALIRWRHPEIGLIRPDKF 603 Query: 910 RRSFSDPALSHALDRRVFHEF-FQQAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLE 968 + + + V + A A +++S+ +S L + ++D+ + Sbjct: 604 ISISEETGQIYNIGLWVAKQAIIDTKALHEAGHILTVSINVSSKQLENEKFIDDICCVVN 663 Query: 969 NSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMAD 1024 + + L I I+ + + + +L G ++ + G + LK A Sbjct: 664 EIGIDKSYVELEITESHIMSNIDKALKILNELSDKGFKLSIDDFGTGYSSLSYLKKLPAQ 723 Query: 1025 YLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYG 1084 + +D ++ + D ++ I A+ LG IA +DTL + + + G Sbjct: 724 TIKIDRSFVLDIYKDEDDRSIVATIIAMAKALGKDVIAEGSETQEHIDTLKYLHCNKVQG 783 Query: 1085 EVIADAQPLDLL 1096 + +D Sbjct: 784 YFFSKPIEIDEF 795 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 46/304 (15%), Positives = 100/304 (32%), Gaps = 32/304 (10%) Query: 285 MVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRG 344 + F E++H + E A E + IG + L + + + G +E Sbjct: 112 WDITEFNEEKEHFKKLEYGLSKAQELANIGHWELNLVTNDLFWSDEVYRIFGLKPQEFGA 171 Query: 345 LT--FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDG 402 F + P+D+ I+ Y + R +NG+V + DG Sbjct: 172 TYEAFLEHIHPDDVELVNSSYSDSITNRCG-YHVTHRIVRKNGEVGFVEERCEHEFDNDG 230 Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELY 462 L I + DI + K + E + ++ G+ + +I ++ ++ Sbjct: 231 NVLRSIGTVHDITKQKIAQNELMLASEVFSKMSD----GVVITDANQSIIKINESFTKIT 286 Query: 463 EIPPHIKPNW------QVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHI 516 W++ + K + D ++ + E K R+I Sbjct: 287 GYTNEELIGMTPKAFSSGWHD-------EAFYKKMWDDIKQNGQWSGEIIDRKKSSERYI 339 Query: 517 RAL-ANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAM 575 + + N +G + + I D+++ K+ + + DS+ D+ Sbjct: 340 AEMNIIALHNDDGILTNYISITNDISKKKEQEKLIHN-----LAYFDSL------TDLPN 388 Query: 576 KITF 579 ++ F Sbjct: 389 RVLF 392 >UniRef50_B4B330 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B330_9CHRO Length = 1188 Score = 710 bits (1833), Expect = 0.0, Method: Composition-based stats. Identities = 183/818 (22%), Positives = 343/818 (41%), Gaps = 37/818 (4%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + + + + +SE FR ++S IG+A+ EG+ ++ N+A Q +G+++ EL T Sbjct: 381 ITERKRAEEALKKSEEQFRLVFQHSPIGIAIATPEGKLVRVNEAFSQMMGFTEAELLKRT 440 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 LT+P+DL ++ +KL++GEI Y +EKRY + G V++ +L V L+R PL Sbjct: 441 CGDLTYPDDLKNEIPLHQKLLAGEIAYYRLEKRYLTKKGQVLYGMLHVGLIRDEQDKPLN 500 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP 466 + Q+ DI+E + E ++ +R++ G+ + NI + +L+ Sbjct: 501 LVGQVVDISEKTQAEIALRESEDRLSRIITTISDGLIVVNNQGNIKFINPAGEKLFGRSQ 560 Query: 467 HIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNK 526 V ++ E I + + + ++ Sbjct: 561 EELLEQHFGVPFV----------------DGKTT---EIFIRHANQQLIVAEMRVGLIIW 601 Query: 527 EGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCID-MAMKITFMNPVAE 585 E + L+ + D+TE KQ+ +AL + ++RL L+SI + V + + ++NP E Sbjct: 602 EQQKAHLISL-RDITERKQIEKALSESEQRLESILNSIEDVVWSTSATTLNLIYLNPATE 660 Query: 586 KMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVH 645 ++ G + E+ L L ++ D+ L++ + A E + + G ++ Sbjct: 661 RVYGCSIEQLLAEGNLW-FNLVHPDDQALIDAHFKALEDTGHSEYEYRIVRPDGTVRWLY 719 Query: 646 YSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQ 705 + G I + D+TE + QL Y+A HD LT L NR ++L L+ Sbjct: 720 SRSRTIYDPTGKPIRFEGIDSDITERKSFTEQLQYNAYHDPLTSLPNRIFLLEKLEEALK 779 Query: 706 TVN-STHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDE 764 + A++F+DLD FK VNDS GH GD LL +A + + L LAR GGDE Sbjct: 780 KNQNRENIFFAVLFLDLDDFKVVNDSLGHIVGDQLLIAIAQRLKTSLSVPHTLARFGGDE 839 Query: 765 FGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMS 823 F +LL + + + A +I + + + G+ + S GI L D + E++ Sbjct: 840 FTILLEEIQSTDEPLKAAQKIHNDLTQ-PYDLNGQQVFISTSIGIALSDPSYIHPQEILR 898 Query: 824 QADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRI 883 AD A Y +K G+G V++ Q +R + ++ + + I+ + ++ + S + Sbjct: 899 DADTAMYQAKRWGKGGYAVFDQQMHLRAVKRLHLEIELR-QAIELKEFLLYYQPIVS--L 955 Query: 884 PEARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS-- 940 +L W +I F + L + + + + +Q Sbjct: 956 STGYLTGFEALIRWQHPKKGLISPVEFIPIAEETGLIVPMGKWITQQACRQLKLWQEQYN 1015 Query: 941 --KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQ 994 + IS+ LS L ++ L+ ++ E L + + P L L I ++++ + + Sbjct: 1016 LKNPLQISVNLSSKQLRNSHLIEEIDEILAQTGIDPSSLKLEITESMLMENVDIAMNILI 1075 Query: 995 KLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQ 1054 +LR + L G + L + +D +Q + ++ I A Sbjct: 1076 ELRKRNIELCLDDFGTGYSSLSYLHRFPVTTVKIDRSFVMQMQPGNSNAEIVHAIITLAH 1135 Query: 1055 RLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQP 1092 L M A V L + L + + G + P Sbjct: 1136 SLEMTVTAEGVETQLQLQQLQWLECEQAQGYFFSKPLP 1173 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 78/395 (19%), Positives = 148/395 (37%), Gaps = 18/395 (4%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 E K F S + + G +G + N A LGYS EEL F +L Sbjct: 136 TEPKQAEIQRERF---FTLSLDLLCIAGFDGYFKCLNPAWETTLGYSTEELISQPFIELI 192 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 P++ L ++E+L G++ TY E RY R G W L A Sbjct: 193 HPDEREAALTEIERLGRGQL-TYHFENRYRTREGTYRWLTLTAVPYVEEG----LIYAVA 247 Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFS----WDKRMFELYEIPPH 467 DI + K+TE QQ + + + ++ + KP FS W+K +++ I Sbjct: 248 HDITKRKQTEAEIQQTRNFLQTMIDHLPLAVFVKDGKPETFSQIILWNKTCEKIFGISAT 307 Query: 468 IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKL--EFRITVKDGIRHIRALANRVLN 525 + + + + R++ R P ++ E + G R + + + + Sbjct: 308 EAIGSTTFEHFSDSQ-AEFFYQKDRETFARRMPLEIPEEEADSYSLGKRLLHTVKIPLYD 366 Query: 526 KEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAE 585 ++ + + LL I+ D+TE K+ EAL + +E+ + + K+ +N Sbjct: 367 EQDQPQYLLCISEDITERKRAEEALKKSEEQFRLVFQHSPIGIAIATPEGKLVRVNEAFS 426 Query: 586 KMSGWTQEEALGVPLLTVLHITFGDNG-PLMENIYSADTSRSAIEQDVVLHCRSGGSYDV 644 +M G+T+ E L + + N PL + + + + + + + G Sbjct: 427 QMMGFTEAELLKRTCGDLTYPDDLKNEIPLHQKLLAGEIA--YYRLEKRYLTKKGQVLYG 484 Query: 645 HYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLS 679 + + + V + D++E + L Sbjct: 485 MLHVGLIRDEQDKPLNLVGQVVDISEKTQAEIALR 519 Score = 77.6 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 23/160 (14%), Positives = 54/160 (33%), Gaps = 13/160 (8%) Query: 525 NKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVA 584 +++G +G+ D+TE KQ + + + +NP Sbjct: 120 DEQGNCTNCIGVKTDVTEPKQAEIQRER-------FFTLSLDLLCIAGFDGYFKCLNPAW 172 Query: 585 EKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDV 644 E G++ EE + P + ++H + + I + + R G + Sbjct: 173 ETTLGYSTEELISQPFIELIHPD--EREAALTEIERLGRGQLTYHFENRYRTREGTYRWL 230 Query: 645 HYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASH 684 + P +G V D+T+ ++ ++ + + Sbjct: 231 TLTAVP-YVEEGLI---YAVAHDITKRKQTEAEIQQTRNF 266 >UniRef50_C7CCD7 Putative diguanylate cyclase (GGDEF) /phosphodiesterase (EAL), with GAF and two PAS/PAC sensor domains n=1 Tax=Methylobacterium extorquens DM4 RepID=C7CCD7_METED Length = 1028 Score = 709 bits (1831), Expect = 0.0, Method: Composition-based stats. Identities = 192/915 (20%), Positives = 361/915 (39%), Gaps = 49/915 (5%) Query: 218 FIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLIL 277 F I L+ + + + L + + V + D + ++ Sbjct: 100 FAINPLVVGDLAVRFYAGAPLILRSGIRVGTICIFDTKPCSFSEMQRTQLQDLARIVVAH 159 Query: 278 LPANIMTMVMYAFRAERKHISE----SETHFRNAMEYSAIGMA-LVGTEGQWLQTNKALC 332 + + + + A AER +E +R + + + +G + TN+ Sbjct: 160 IELHQGRLTIEAALAERTRSEALIAANEARYRALADALPQMVWVMTSADGSAIYTNERFR 219 Query: 333 QFLGY---SQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVW 389 + G +EE P D + ++ ++ ++ E +TY++E R +G W Sbjct: 220 TYYGSIGPQREERTSRN-----HPADTERMAEEWQRAVTHE-HTYAVEGRLRRHDGTYRW 273 Query: 390 ALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKP 449 L + VR +GT + ++ DI ++ + + + LA EA G G+W+ +L Sbjct: 274 HKLVMVPVR-QNGTVVEWLGTALDIEDIVTARSTLEHTTDLLRLAQEAAGAGVWQRDLDD 332 Query: 450 NIFSWDKRMFELYEIPPH------IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKL 503 ++ ++ I + W V P+D + +L++ + +K+ Sbjct: 333 DVVRHSPMSARMHGFLGEPDLSGWIAVSIAEWAARVHPDDLAQVRAMHAGALRNGTTYKV 392 Query: 504 EFRITVK---DGIRHIRALANRVLNK-EGEVERLLGINMDMTEVKQLNEALFQEKERLHI 559 EFR+ D R + + ++ G R++G+N+D+T+ + +AL Q + L Sbjct: 393 EFRVRQSADMDDYRWLMGFGRVIRDETSGRPLRVVGLNLDITDRRTTEDALAQSQTHLRA 452 Query: 560 T-------LDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGV--PLLTVLHITFGD 610 + LDS + + ++ + + + M G+ E ++H Sbjct: 453 SEERLALALDSGNDGLFDWNVTTGKVWYSDRWQTMLGYKPGEIEPHILSWERLVHPDDLH 512 Query: 611 NGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPL-STLDGSNIGSVLVIQDVT 669 + + + S + + L +SG V + G+ + V D+T Sbjct: 513 QARTLLTEHFGELS-ATYSSEHRLRSKSGEYTWVLGRGRVVARDEQGAPLRMVGTSIDIT 571 Query: 670 ESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVND 729 E + ++++Y A HD LT L NR F + L L V + AL+ +DLDRFK++ND Sbjct: 572 ERKASEQRIAYMARHDVLTGLPNRTVFHEHLEQRLAEVRRGRGQAALLCLDLDRFKSIND 631 Query: 730 SAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN-VESARFIATRIISAV 788 GH AGD LL ++A+ + + +R DV+ RLGGDEF +++ + A +A R+I AV Sbjct: 632 MLGHPAGDELLCQIATRLRATVRGGDVVVRLGGDEFAIIVSHLDHARQASVLAQRVIDAV 691 Query: 789 NDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQA 848 G + VG S GI N + + AD+A Y +K R YE Sbjct: 692 GQ-PLDLGGHLVTVGISIGIAFAPTNGDTSETLFKNADLALYRAKASARNTYCFYEAGMD 750 Query: 849 AAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQ 907 AA R + + + I + V R+ + R + +L W + +I Sbjct: 751 AAVEARMQLEFEMR-EAITCGSFALHYQPV--LRLADHRIVGFEALMRWPHPKRGMIAPD 807 Query: 908 TFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLVNDLLEQL 967 F S + L L E ++AA + I++ +S L ++ L Sbjct: 808 EFIPSAEETGLIVPLGSWALQEACREAASWPDH--LRIAVNVSAVQFQQPGLEQGVMSAL 865 Query: 968 ENSPLPPRLLHLIIPAEAILDHAESV----QKLRLAGCRIVLSQVGRDLQIFNSLKANMA 1023 S L P L L + ++ AE+V +L+ G RI L G + L+ Sbjct: 866 AASGLAPHRLVLEVTESVLVQDAEAVIACLHRLKSLGVRIALDDFGTGYSSLSYLRRFPF 925 Query: 1024 DYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIY 1083 D + +D + + G+ ++ + G A +LG A V ++ + G + Sbjct: 926 DRIKIDRSFISEI-GDPGAAAIVRAVVGIAMQLGATVTAEGVETTAQLEQVRSEGCMEVQ 984 Query: 1084 GEVIADAQPLDLLVN 1098 G +++ P D + Sbjct: 985 GYLVSRPLPADRAIE 999 >UniRef50_A0LA87 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LA87_MAGSM Length = 1070 Score = 708 bits (1828), Expect = 0.0, Method: Composition-based stats. Identities = 166/817 (20%), Positives = 328/817 (40%), Gaps = 27/817 (3%) Query: 297 ISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT--FQQLTWPE 354 + + AM S IG+ ++ ++ + Q + G F L E Sbjct: 245 LERYQARLGLAMAASRIGIWEWDVVTGKVEWDEGMHQIFDLPKGAFDGTWEGFLALFDGE 304 Query: 355 DLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDI 414 D + Q ++ ++ E + +E R G L L G + I DI Sbjct: 305 DSARLEQCRQESLT-EQLRFELECRTQPVAGVQKTLSLRGELRMPEHGVEAHLIGACWDI 363 Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIP-PHIKPNWQ 473 +E K+ E + + A G+G W W L+ + W + ++ + P H+ +++ Sbjct: 364 SEQKQAELKLLESRHHLDRAQRLAGLGYWSWNLQGDEQFWSEEIYRMLHRPRAHVSASFE 423 Query: 474 VWYECVLPEDRQHAEKVIRDSLQS-RSPFKLEFRITVKD-GIRHIRALANRVLNKEGEVE 531 + + V P+DRQ ++ L+ F++E RI D +R + L + + GE Sbjct: 424 SYMDHVHPDDRQRVRDMVARVLKEPDLFFRVEHRIVRSDGNVRTVLQLGDVERSASGEPV 483 Query: 532 RLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWT 591 R+ G D+T++K+ E L + LD+ +AV+ D+ +I +N K++G++ Sbjct: 484 RMTGTVQDITDLKRTQENL----DLAKYILDTTSDAVIITDVNNRIIDVNHAYTKITGFS 539 Query: 592 QEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPL 651 ++E +G V + G+ I+ + +V ++G Y ++ + Sbjct: 540 RDEVMGQNPQVVHNEEQGE--AFYSRIWQSLLQEGRWSGEVWERRKNGELYPKWMTMRRM 597 Query: 652 STLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTH 711 G V V D++ + Q+ A +D LT L NRA F ++L + T Sbjct: 598 LNQYGETAFFVGVFVDISTQKATEEQMERLAYYDPLTKLPNRALFHERLTQSITTAKRYK 657 Query: 712 QRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD 771 + +V +DL+RFK +N+S G+ GD LL ++A ++ LR SD++AR+G D F + L D Sbjct: 658 RHVGVVMLDLNRFKLINESYGYGVGDGLLIQVAERIVERLRESDIVARIGADTFAITLVD 717 Query: 772 CNVE-SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACY 830 E +A ++ F+ G + + GI L + A ++ + A Sbjct: 718 LKQEGEITGVANNLLKQFV-MPFLVNGHELMLRTAMGIVLYPTDGQDAETLLRHVENALG 776 Query: 831 ASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLW 890 +K G Y + + ++R A+ + +++ ++ + + Sbjct: 777 QAKQQGVNNYRFYSEEMSNISNKRLALEQEM-HTALEQRDFVLYYQPKVNLQ--RGVVSG 833 Query: 891 LISLKLWSC-EGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAK--AVASKGISISL 947 + SL W + +I F + L + + +A + + ++++ Sbjct: 834 VESLIRWQHKQKGMISPVEFIPVAEETGLIVPMGLWILETACAEAKRITDYLGQPFTVAV 893 Query: 948 PLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRLAGCRI 1003 LS S L+ + E L NS + P +L I ++ + E++ +R G + Sbjct: 894 NLSARQFQSRNLLESISETLNNSAIDPSMLEFEITESMMMGNVEKSIETLVAIRNMGVTL 953 Query: 1004 VLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAG 1063 + G + LK + L +D ++ + D +++ I AQ L + +A Sbjct: 954 AIDDFGTGYSSLSYLKRFPINTLKIDQSFIRDLGVDSDDAAIVSAIISMAQDLNLHVVAE 1013 Query: 1064 PVVLPLVMDTLSGIGVDLIYGEVIADAQP---LDLLV 1097 + L G + + G + P L+ L+ Sbjct: 1014 GAEKAEQVLFLKERGCETVQGYYFSRPLPQTDLERLL 1050 >UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7V0E6_PSEA8 Length = 1415 Score = 707 bits (1825), Expect = 0.0, Method: Composition-based stats. Identities = 174/842 (20%), Positives = 324/842 (38%), Gaps = 42/842 (4%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQ-WLQTNKALCQFLGYSQEELRGL 345 + + + + E E + +A++ + + + + +N L Q LGY+QEEL + Sbjct: 569 VTSRKEVELSLIEREKFWSDAVQAVPDTLYIHDLHARRVIFSNHHLGQQLGYNQEELARM 628 Query: 346 T---FQQLTWPEDLNKDLQQVE-KLISGEINTYSMEKRYYNRNGDVVWALLA-VSLVRHT 400 ++ L P+D + + + G+ + R+ +R+G W + + R Sbjct: 629 GENFWETLLHPDDQEYYWRIRNLQHVVGDGLLLDSQLRWRHRDGRWHWFDIREQAFSRDR 688 Query: 401 DGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFE 460 G I +DI ++ R + E I+ + + N + Sbjct: 689 SGRVARLIGVAKDITFTVEANNALRENGRRYRMLAENISDVIFSTDAELNASYVSPSVQH 748 Query: 461 LYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFK--LEFR------------ 506 ++ P + P ++R + + E R Sbjct: 749 VFGYSPEWALLNGLHQTATNPRQLGRLNGLLRRVRHAIGDRQKLAELRENPGQHLFALDC 808 Query: 507 ITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGE 566 + I + ++ E LLGI D+++ ++ L + Sbjct: 809 LRADGRKIPIELRIVLMWDEHDRFEGLLGIARDISQQRRAEREL----RMAATVFEHSTA 864 Query: 567 AVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRS 626 A++ D A I +N +++G++ + L + ++++ ++ Sbjct: 865 AIMVTDPAGYIVQVNDSFSRLTGYSPADVLDQQPRLL--TADRQEANQLKHVLASLQHSG 922 Query: 627 AIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDA 686 + E +++ ++G Y IT + +G + V D++E + R++ A +DA Sbjct: 923 SWEGEILQKRKTGELYPSWVGITAVRDEEGDLVSFVCFFSDISERKASERRIHRLAYYDA 982 Query: 687 LTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASL 746 LTHL NR F+ +L LQ Q L+F+DLDRFK +NDS GHAAGD +L+E+A+ Sbjct: 983 LTHLPNRTLFQDRLHTALQQAERNGQWVVLMFLDLDRFKPINDSLGHAAGDRMLQEVATR 1042 Query: 747 MLSMLRSSDVLARLGGDEFGLLLP-----DCNVESARFIATRIISAVNDYHFIWEGRVHR 801 + + + D +AR+GGDEF LLLP + ++ A +A I+ + F EGR Sbjct: 1043 LSACVSQDDTVARMGGDEFTLLLPSQGDREIALKRAIQVAELILGRLAR-PFTLEGREFF 1101 Query: 802 VGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDE 861 V AS G+ L + + + +M AD A Y +K G+ Y+ + A ER + D Sbjct: 1102 VTASIGVALSPQDGAELSLLMKNADTAMYHAKEMGKNNFQFYQAEMNARALERLELESDL 1161 Query: 862 QWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSH 920 + R ++ + ++ + R +L W ++ F + L Sbjct: 1162 R-RALELGEFVLHYQPQFTG--DGRRLTGAEALLRWQHPRRGLVPPSEFIPVLEEIGLVA 1218 Query: 921 ALDRRVFHEFFQQAAKAVASKGI--SISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLH 978 + + E +Q +K +S+ LS + L + L + +PP L Sbjct: 1219 QVGDWLLAEACKQLRSWHKAKVRVPKVSVNLSARQFADGQLGERIAAILYETGIPPACLE 1278 Query: 979 LIIPAEAILDH-AESVQ---KLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCA 1034 L + ++ AE++Q L+ G I + G N LK D L +D Sbjct: 1279 LELTESILMSDVAEAMQILSGLKRLGLAIAVDDFGTGYSSLNYLKQFPIDVLKIDRSFVD 1338 Query: 1035 NVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLD 1094 + D + I A L + IA V +D L G D + G + P + Sbjct: 1339 GLPHGEQDAQIARAIIAMAHSLNLMVIAEGVESQAQLDFLREHGCDEVQGYLFGRPMPAE 1398 Query: 1095 LL 1096 Sbjct: 1399 QF 1400 Score = 91.1 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 67/466 (14%), Positives = 139/466 (29%), Gaps = 57/466 (12%) Query: 273 FLLILLPANIMTMVMYAFRAERKHIS-------ESETHFRNAMEYSAIGMALVGTEGQWL 325 + LL + ++ E++ + S A+ + + +G+ Sbjct: 256 LAIFLLLVGVTVYMLLRLHREQQGLRAMTLASQRSLRQAATALAAIDERVLVTRADGRLS 315 Query: 326 QTNKALCQFLGYSQEELRGLTFQQLTWPE-----------DLNKDLQQVEKLISGEINTY 374 N + G S + R L P+ D + + + GE T+ Sbjct: 316 YLNPQAERLFGISSAQARQHHLLGLL-PDLEPGWLTDAGGDGETRSELLPLRVRGEPRTF 374 Query: 375 SM----------------EKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELK 418 ++ R G VW L V+ +H G + +DI E Sbjct: 375 TLSRHPLASYPALADQAWTLREQILQGGQVWVLRDVTEEQHALGVLEETRRRYQDIFEGV 434 Query: 419 RTEQVNQQLMERITLANEAGGIGIWEWEL-------KPNIFSWDKRMFELYEIPP---HI 468 L E G + R+ E+ ++ I Sbjct: 435 GVALCVLDLSALRQALVEQGLDSCAALRAWLAGEPGRQQALLERIRITEINDVSRRLLQI 494 Query: 469 KPNWQVWYECVL-----PEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRV 523 Q W + P+ + +VI ++ R +LE + L R+ Sbjct: 495 DSTEQAWQRLLDHGPLQPDSLR--LQVIEALIERRPVLELEATLRCGKSTPRHLWLQLRL 552 Query: 524 LNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMA-MKITFMNP 582 GE + D+T K++ +L + ++ + ++ + + D+ ++ F N Sbjct: 553 PENPGEWHAVTLSLSDVTSRKEVELSLIEREKFWSDAVQAVPDTLYIHDLHARRVIFSNH 612 Query: 583 VAEKMSGWTQEEA--LGVPLLT-VLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSG 639 + G+ QEE +G +LH + + N+ ++ + R G Sbjct: 613 HLGQQLGYNQEELARMGENFWETLLHPDDQEYYWRIRNLQHVVGDGLLLDSQLRWRHRDG 672 Query: 640 GSYDVHYSITPL-STLDGSNIGSVLVIQDVTESRKMLRQLSYSASH 684 + G + V +D+T + + L + Sbjct: 673 RWHWFDIREQAFSRDRSGRVARLIGVAKDITFTVEANNALRENGRR 718 Score = 78.8 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 45/289 (15%), Positives = 91/289 (31%), Gaps = 29/289 (10%) Query: 283 MTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQE-- 340 + + + E+ +R E + + E + ++ GYS E Sbjct: 698 VAKDITFTVEANNALRENGRRYRMLAENISDVIFSTDAELNASYVSPSVQHVFGYSPEWA 757 Query: 341 ELRGLTFQQLTWPEDLNKDLQQVEKL------------ISGEINTYSMEKRYYNRNGDVV 388 L GL Q T P L + + ++ + + +G + Sbjct: 758 LLNGLH-QTATNPRQLGRLNGLLRRVRHAIGDRQKLAELRENPGQHLFALDCLRADGRKI 816 Query: 389 WALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELK 448 L + L+ + DI++ +R E+ + E I + Sbjct: 817 PIELRIVLMWDEHDRFEGLLGIARDISQQRRAERELRMAAT----VFEHSTAAIMVTDPA 872 Query: 449 PNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKV--IRDSLQSRSPFKLEF- 505 I + L P + Q +L DRQ A ++ + SLQ ++ E Sbjct: 873 GYIVQVNDSFSRLTGYSPADVLDQQP---RLLTADRQEANQLKHVLASLQHSGSWEGEIL 929 Query: 506 --RITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQ 552 R T + + V ++EG++ + D++E K + + Sbjct: 930 QKRKTGELYPSWV--GITAVRDEEGDLVSFVCFFSDISERKASERRIHR 976 Score = 47.9 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 40/202 (19%), Positives = 74/202 (36%), Gaps = 41/202 (20%) Query: 533 LLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQ 592 LL ++ + ++ + A + + L +I E V+ +++++NP AE++ G + Sbjct: 270 LLRLHREQQGLRAMTLASQRSLRQAATALAAIDERVLVTRADGRLSYLNPQAERLFGISS 329 Query: 593 EEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCR-SGGSYDVHYSITPL 651 +A LL +L P +E + D + +L R G S PL Sbjct: 330 AQARQHHLLGLL--------PDLEPGWLTDAGGDGETRSELLPLRVRGEPRTFTLSRHPL 381 Query: 652 ST----LDGSNI--------GSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQ 699 ++ D + G V V++DVTE + L L + R ++ Sbjct: 382 ASYPALADQAWTLREQILQGGQVWVLRDVTEEQHALGVLEET-----------RRRYQDI 430 Query: 700 LRILLQTVNSTHQRHALVFIDL 721 AL +DL Sbjct: 431 FE---------GVGVALCVLDL 443 >UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1A0_9PROT Length = 1011 Score = 707 bits (1825), Expect = 0.0, Method: Composition-based stats. Identities = 150/702 (21%), Positives = 286/702 (40%), Gaps = 28/702 (3%) Query: 410 QIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIK 469 + L+ T Q+ +R+ E I + + ++ + E + Sbjct: 316 IVRHAQRLQATSNDLQESEKRLRTIFETEPECIKVVDRNGELVEMNQAGLAMLEAATLEE 375 Query: 470 PNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITV-KDGIRHIRALANRVLNKEG 528 + + V PED+ + R + S LEF+IT K + H+ A + + G Sbjct: 376 ARQKKLIDYVAPEDQAAFLALHRRVMNGESAV-LEFKITGLKGTLHHLETHATPMPDANG 434 Query: 529 EVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMS 588 + LLGI D+T + L E ++ D I +N +++ Sbjct: 435 NISLLLGITRDVTASMHAKQQLRIAATAFE-----SQEGMLVTDAVGAILRVNQAFTRIT 489 Query: 589 GWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSI 648 G+T +E +G + + + + ++ E ++ ++G Y H +I Sbjct: 490 GYTADEVIGKNPRIL--NSGRHDAYFYKEMWERIKRTGEWEGEIWNRRKNGDVYPEHLTI 547 Query: 649 TPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVN 708 T + G+ + V + D+T S+ ++ A D LT L NR + +L+ L + Sbjct: 548 TAVKDAGGNVVNYVATLMDITASKASEEEIRNLAFFDPLTRLPNRRLLQDRLQQALASCG 607 Query: 709 STHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLL 768 + + A++FIDLD FK +ND+ GH GD LL ++A + S +R D +AR+GGDEF ++ Sbjct: 608 RSGKSGAILFIDLDNFKNLNDTLGHDIGDLLLEKVAIRLSSCVREGDTVARIGGDEFVVM 667 Query: 769 LPDCN------VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVM 822 L D + E + ++I++++N + + S G TL +DN++ E++ Sbjct: 668 LEDLSDNILDAAEQTESVGSKILASLN-VPYQLGIHTYDNSPSIGATLFNDNHNSIDELL 726 Query: 823 SQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPR 882 QADIA Y +K GR + ++P+ + S R A+ L+ + + I+++Q + Sbjct: 727 KQADIAMYQAKKAGRNTMRFFDPRMQQSLSARLALELELR-KAIEKDQFQLYYQIQVD-- 783 Query: 883 IPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA---V 938 R L +L W E ++ F + L + V Q Sbjct: 784 -ETHRPLGAEALLRWMHPEHGLMAPAEFIPMAEETGLIVPIGWWVLETACTQLKAWEKDP 842 Query: 939 ASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQ 994 ++ + +S+ +S V+ + +++ + P LL L + +L++ ++ + Sbjct: 843 LTRNLVLSINVSAKQFHQPDFVDQVQAAVDHYGIDPALLKLELTESILLENVDTTIKRMS 902 Query: 995 KLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQ 1054 L+ G L G LK D L +D + + D +++ I AQ Sbjct: 903 ALKKTGVGFSLDDFGTGYSSLQYLKRLPLDQLKIDQSFMQEITSDSSDMAIVSTIIAMAQ 962 Query: 1055 RLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 + M IA V L G + G + + P++ Sbjct: 963 SMQMGVIAEGVETEEQRQLLLRKGCNHFQGYLFSKPVPVEQF 1004 Score = 89.6 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 43/265 (16%), Positives = 84/265 (31%), Gaps = 10/265 (3%) Query: 289 AFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFL-GYSQEELRGLTF 347 +A + ESE R E + +V G+ ++ N+A L + EE R Sbjct: 322 RLQATSNDLQESEKRLRTIFETEPECIKVVDRNGELVEMNQAGLAMLEAATLEEARQKKL 381 Query: 348 QQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYF 407 PED L ++++GE + +E + G + + + +G Sbjct: 382 IDYVAPEDQAAFLALHRRVMNGE--SAVLEFKITGLKGTLHHLETHATPMPDANGNISLL 439 Query: 408 IAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPH 467 + D+ +Q RI G+ + I ++ + Sbjct: 440 LGITRDVTASMHAKQQL-----RIAATAFESQEGMLVTDAVGAILRVNQAFTRITGYTAD 494 Query: 468 IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA-NRVLNK 526 D + K + + ++ ++ E K+G + L V + Sbjct: 495 EVIGKNPRILNSGRHD-AYFYKEMWERIKRTGEWEGEIWNRRKNGDVYPEHLTITAVKDA 553 Query: 527 EGEVERLLGINMDMTEVKQLNEALF 551 G V + MD+T K E + Sbjct: 554 GGNVVNYVATLMDITASKASEEEIR 578 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 62/158 (39%), Gaps = 6/158 (3%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + A ++ + + T F S GM + G L+ N+A + GY+ +E+ G Sbjct: 446 VTASMHAKQQLRIAATAFE-----SQEGMLVTDAVGAILRVNQAFTRITGYTADEVIGKN 500 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 + L +++ + I + E +NGDV L ++ V+ G + Sbjct: 501 PRILNSGRHDAYFYKEMWERIK-RTGEWEGEIWNRRKNGDVYPEHLTITAVKDAGGNVVN 559 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWE 444 ++A + DI K +E+ + L L + + Sbjct: 560 YVATLMDITASKASEEEIRNLAFFDPLTRLPNRRLLQD 597 >UniRef50_Q47ED8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47ED8_DECAR Length = 827 Score = 707 bits (1824), Expect = 0.0, Method: Composition-based stats. Identities = 170/705 (24%), Positives = 301/705 (42%), Gaps = 20/705 (2%) Query: 416 ELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVW 475 E K T Q R ++A +GI+ ++ + ++ + W Sbjct: 126 ERKTTRQALTLSEARFRAMSDASPLGIFVSDIHGECVYTNAAYHKISGLNLEQTLGTN-W 184 Query: 476 YECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLG 535 + P+DRQ R + + F+ E R DG L + + + Sbjct: 185 SMAIHPDDRQRVLLEWRAAALGEATFQTEARFLRADGSIVWARLNAAAMLDGLHLRGHVQ 244 Query: 536 INMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEA 595 D++E K +ALF+EKER +TL+SIG+AV+ ++ +T++N VAE M+GW +E A Sbjct: 245 TVEDISERKITEDALFEEKERAQVTLNSIGDAVLTTNLKGDVTYLNLVAEMMTGWPREAA 304 Query: 596 LGVPLLTVLHITFGDNGPLMENIYS---ADTSRSAIEQDVVLHCRSGGSYDVHYSITPLS 652 +G PL V I G + N + + D +L R G + S P+ Sbjct: 305 IGQPLSEVFRILNGTTREVAPNPAQLAIRENRTVGLAADSILIHRDGLEAAIEDSAAPIH 364 Query: 653 TLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQ 712 DG G+V+V DV+ESR M ++++ A HD LT L NRA ++L + ++ Sbjct: 365 NRDGQVAGAVIVFHDVSESRAMALKMAHLAQHDFLTGLPNRALLTERLSRAIGQARRHNK 424 Query: 713 RHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC 772 R ++F+DLD FK +NDS GHA GD LL+++A ++ +R +D + R GGDEF +LL + Sbjct: 425 RVGMLFLDLDYFKHINDSLGHAVGDQLLQQVAERLIVCIRDTDTVCRQGGDEFVILLAEI 484 Query: 773 N-VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYA 831 A IA ++++A + + G V S GI++ D+ A VM AD A Y Sbjct: 485 EQARDAAPIAEKLLAAFAE-PCLIAGNELHVSLSIGISIYPDDGMDADTVMKNADTAMYH 543 Query: 832 SKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWL 891 +K GR + + R + + + R +++ + M+ + + Sbjct: 544 AKANGRNNYQFFTTEMNTRAVRRLFIEGNLR-RALRQGEFMLYYQPKID--LASGMMIGS 600 Query: 892 ISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK--GISISLP 948 +L W E ++ + F + L + V E +Q S + +S+ Sbjct: 601 EALIRWQDPEHGLVYPKQFVPIAEESGLIVPIGSWVLREACRQVRAWQESGLVAVPVSVN 660 Query: 949 LSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIV 1004 +S + + L+ + + P L L + ++ AES ++ L+ G ++ Sbjct: 661 ISAVEFRHKDFLEGVALILKETGMLPSYLELELTESILMHDAESSATVLEALKTMGMQLA 720 Query: 1005 LSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGP 1064 + G + LK + L +D ++ + D ++ + G + L + +A Sbjct: 721 IDDFGTGYSSLSYLKRFPINTLKIDQSFVHDIAIDPDDASIVGAMIGMGKNLKQRVVAEG 780 Query: 1065 VVLPLVMDTLSGIGVDLIYGEVIADAQPLDL----LVNSSYFAIN 1105 V + L + D G + P D L+N F+ + Sbjct: 781 VETEEQLAFLRTLHCDEGQGFLFGRPLPADEFARLLLNDRGFSAD 825 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 52/275 (18%), Positives = 106/275 (38%), Gaps = 7/275 (2%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + + R+ ++ SE FR + S +G+ + G+ + TN A + G + E+ G Sbjct: 124 LIERKTTRQALTLSEARFRAMSDASPLGIFVSDIHGECVYTNAAYHKISGLNLEQTLGTN 183 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 + P+D + L + GE T+ E R+ +G +VWA L + + Sbjct: 184 WSMAIHPDDRQRVLLEWRAAALGEA-TFQTEARFLRADGSIVWARLNAAAMLDGL-HLRG 241 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP 466 + +EDI+E K TE + ER + + G + LK ++ + + P Sbjct: 242 HVQTVEDISERKITEDALFEEKERAQVTLNSIGDAVLTTNLKGDVTYLNLVAEMMTGWPR 301 Query: 467 H--IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKL---EFRITVKDGIRHIRALAN 521 I + + R+ A + +++ L I I A Sbjct: 302 EAAIGQPLSEVFRILNGTTREVAPNPAQLAIRENRTVGLAADSILIHRDGLEAAIEDSAA 361 Query: 522 RVLNKEGEVERLLGINMDMTEVKQLNEALFQEKER 556 + N++G+V + + D++E + + + + Sbjct: 362 PIHNRDGQVAGAVIVFHDVSESRAMALKMAHLAQH 396 >UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P464_9PROT Length = 1347 Score = 703 bits (1814), Expect = 0.0, Method: Composition-based stats. Identities = 169/831 (20%), Positives = 309/831 (37%), Gaps = 45/831 (5%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMA---LVGTEG-----QWLQTNKALCQFLGYS 338 + + + E +R+ + G+A ++ +G +++ N A + G Sbjct: 529 ITQRKQTELALRAKEATYRSLFDNMLNGVAHYRMIFRDGAPVDYEFIAVNPAFGKTTGL- 587 Query: 339 QEELRGLTFQQLTWP--EDLNKDLQQVEKLIS-GEINTYSMEKRYYNRNGDVVWALLAVS 395 +++ G ++ E LQ K+ GE + Y + G + Sbjct: 588 -KDVVGRKVSEVIPGYCEANQDSLQVFGKVAQTGEACHWEH---YLSALGKWFSFSIYSP 643 Query: 396 LVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFS-W 454 P F+ EDI E K+ E + +R GI + F Sbjct: 644 A-------PGEFVVVSEDITERKQAETALRDSEDRFRSIFNNAIDGILLADSGTRKFIMG 696 Query: 455 DKRMFELYEIPPHIKPNWQVWYECVLPE-DRQHAEKVIRDSLQSRSPFKLEFRITVKDGI 513 + + + Q+ E + PE D+++ ++ S + KDG Sbjct: 697 NSAIARMLGYSNEEL--LQLGTEDIHPEQDKEYYIAQFAMMVRGESTLSSNAVVKRKDGS 754 Query: 514 RHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDM 573 + L G+ L+G D+TE KQ +AL Q +S ++ D+ Sbjct: 755 VFYADIKASPLRI-GDKVYLMGFFRDITERKQTEDALRQG----AAVFESSHNGIIITDL 809 Query: 574 AMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVV 633 I N +SG+T+ E LG + + + +++ + + ++ Sbjct: 810 DGHILAANQAYADISGYTESELLGQNPRIL--NSGRQSRDFYRKMWANIKEAGSWQGELW 867 Query: 634 LHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANR 693 ++G Y +++ + G V + D+++ R+ + + A +D LT L NR Sbjct: 868 NRRKNGEIYPTWLAVSAVRNDQGKATHYVGISSDLSQLRQTEAEREHLAHYDPLTDLPNR 927 Query: 694 ASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRS 753 L L H + ++++DLDRFK +NDS G+ GD LL L + +RS Sbjct: 928 LLLRSHLTHALAQAKRHHNQVGVLYLDLDRFKNINDSLGYQVGDELLVTLTERLTMHMRS 987 Query: 754 SDVLARLGGDEFGLLLPDCN-VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLID 812 D+LARLGGDEF L+L N E + +A ++ + + R +GAS GI++ Sbjct: 988 EDLLARLGGDEFLLVLEHINEPEDSAIVARSLLETLAQPFVLHGEREIFIGASIGISIFP 1047 Query: 813 DNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLM 872 ++ A +++ AD A + +K GR Y + A +E + + I NQL Sbjct: 1048 NDGDSAEQLIQHADAAMHQAKTLGRNTYHFYTEDLSRASNEHLELE-NRLRHAITANQLR 1106 Query: 873 MLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFF 931 + I + +L W E ++ F + L A+ V E Sbjct: 1107 VYYQPQVD--IATGHIIGAEALVRWQDPERGLVQPGQFIPLAEETGLIGAIGEWVLKETC 1164 Query: 932 QQAAKA--VASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH 989 Q + +++++ LS + + + L + P L L + A++ Sbjct: 1165 LQGMRWIDAGLPFLTLAVNLSPHQFLRGNIAGLISKVLAETGFPADRLELELTESALMQQ 1224 Query: 990 AESV----QKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEML 1045 E V LR R+ + G + LK D L +D ++ + D + Sbjct: 1225 GEDVIKMLHLLRAQDIRLAIDDFGTGYSSLSYLKRFPLDILKIDKSFVDDIPFHQDDMEI 1284 Query: 1046 ITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 I LG K +A V ++ L G DL G + + P + Sbjct: 1285 AATIIAMGHILGFKVLAEGVETREQLEFLQARGCDLYQGYLTSPPIPAEEF 1335 Score = 192 bits (488), Expect = 7e-47, Method: Composition-based stats. Identities = 82/434 (18%), Positives = 169/434 (38%), Gaps = 36/434 (8%) Query: 270 WLPFLLILLPANIMTMVMYAFRAERK--------HISESETHFRNAMEYSAIGMALVGTE 321 WL + IL+ + + VM +R +++ SE + + + IGMA+ Sbjct: 376 WLGLVAILIVFVVTSAVMLIWRQQQRLHRMELANRSSEQDKQLKLFYDLPFIGMAITSPA 435 Query: 322 -GQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRY 380 +W+ N LC LGYS+++L + LT P+D+ +L++ E++++GE + +++EKR+ Sbjct: 436 TKRWVYANDRLCDMLGYSRDDLLKTAWIDLTHPDDVAGNLKEFERMVAGETDGFNIEKRF 495 Query: 381 YNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGI 440 ++G + L V R DG P +A ++DI + K+TE + + Sbjct: 496 IRKDGSPITVNLDVKCTRRADGKPDLIVALVDDITQRKQTELALRAKEATYRSLFDNMLN 555 Query: 441 GIWEWEL--------KPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLP---EDRQHAEK 489 G+ + + + + + + + V+P E Q + + Sbjct: 556 GVAHYRMIFRDGAPVDYEFIAVNPAFGKTTGLKDVVGRKVSE----VIPGYCEANQDSLQ 611 Query: 490 VIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEA 549 V Q+ E G ++ + + ++ D+TE KQ A Sbjct: 612 VFGKVAQTGEACHWEH-YLSALGKWFSFSIYSPA------PGEFVVVSEDITERKQAETA 664 Query: 550 LFQEKERLHITLDSIGEAVVCIDMAMK-ITFMNPVAEKMSGWTQEEALGVPLLTVLHITF 608 L ++R ++ + ++ D + N +M G++ EE L + + Sbjct: 665 LRDSEDRFRSIFNNAIDGILLADSGTRKFIMGNSAIARMLGYSNEELLQLGTEDIHPE-- 722 Query: 609 GDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDV 668 D + S + + V+ + G + +PL G + + +D+ Sbjct: 723 QDKEYYIAQFAMMVRGESTLSSNAVVKRKDGSVFYADIKASPLRI--GDKVYLMGFFRDI 780 Query: 669 TESRKMLRQLSYSA 682 TE ++ L A Sbjct: 781 TERKQTEDALRQGA 794 >UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KAZ1_AZOSB Length = 952 Score = 702 bits (1813), Expect = 0.0, Method: Composition-based stats. Identities = 159/698 (22%), Positives = 284/698 (40%), Gaps = 26/698 (3%) Query: 413 DINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMF-----ELYEIPPH 467 EL R + + +R+ + + L W + Sbjct: 259 RQAELVRERAALRTMTQRLEEVLDCSPS--VNYTLTRGEEGWVGTWMSHNLTRMTGFSVA 316 Query: 468 IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLNK 526 W V P+D + A + +R +++ + E+RI DG +R IR V ++ Sbjct: 317 EALAQGWWARTVHPDDLERASRAVR-AVEEDGHYVHEYRIRCADGGVRWIRDELRAVRDE 375 Query: 527 EGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEK 586 G V R+ G+ +D+TE +Q E L ++S + VV D+ I +N + Sbjct: 376 GGRVVRVAGVWIDITEQRQATELLRLN----SAVIESTHDGVVLTDLDGAIVAVNRAFTE 431 Query: 587 MSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHY 646 ++G++++E +G + + + ++++A + ++ ++G + Sbjct: 432 VTGYSRDEVVGQNPRFLQ--SGRHDRGFYLSMWAALKEAGHWQGELWNRRKNGELFPEWL 489 Query: 647 SITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQT 706 ++ + G V V D+++ ++ +L Y A HD LT L NR +L L Sbjct: 490 TLNAVRNEVGHVTHYVGVFTDISKLKQTEDRLDYLAHHDPLTDLPNRLLVLSRLEHALDG 549 Query: 707 VNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFG 766 R A++F+DLDRFK VNDS GHAAGD LLR +A+ + LR D L RLGGDEF Sbjct: 550 AQRRGCRVAVMFLDLDRFKTVNDSLGHAAGDELLRAVAARLRGALREEDTLGRLGGDEFM 609 Query: 767 LLLPDCN-VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQA 825 +LL A +A ++ + + G + AS GI+ D+ ++ A Sbjct: 610 VLLEHVEAPADAAVVAKNLVEVLAAPFALSNGHEVFIRASIGISFYPDDGDDFMTLVRNA 669 Query: 826 DIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPE 885 D A Y +K GR Y + +ER A+ R ++ ++ ++ V + + Sbjct: 670 DAAMYRAKAQGRNTYGFYTEDLIRSATERLALET-RLRRALEHDEFVVYYQPVLGVK--D 726 Query: 886 ARNLWLISLKLWSCEGE-IIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGI- 943 R L +L W +GE ++ F + L AL V + +Q + + + Sbjct: 727 GRLLGAEALVRWKPQGEPMVSPAAFIPVAEETGLIVALGEWVLRDACRQVREWIDAGYAF 786 Query: 944 -SISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRL 998 +++ LS + L L + LP L L I ++L+ E +++L+ Sbjct: 787 GQVAVNLSAEQFRRQDVSAMLATVLAETGLPATQLELEITESSLLEAGEHAVGLLERLKQ 846 Query: 999 AGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGM 1058 G + + G LK D L +D ++ + D + + I A+ L M Sbjct: 847 QGVGLAIDDFGTGYSSLAYLKRFSIDKLKIDRSFVQDIADDSNDLAIASAIVAMARALDM 906 Query: 1059 KTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 A V ++ L G+G G + + P D Sbjct: 907 AVQAEGVEGEAQLELLRGLGCGSYQGYLCSPPLPADEF 944 Score = 97.6 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 83/499 (16%), Positives = 158/499 (31%), Gaps = 59/499 (11%) Query: 252 ADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYS 311 A +L YL+ H +L L ++L + ER + ++ S Sbjct: 228 AAQALRLGVSDYLVKHESYLHELPLVLDKAFRQAELV---RERAALRTMTQRLEEVLDCS 284 Query: 312 AIGMALVGTE-----GQWLQTNKALCQFLGYSQEELRGLTFQQLT-WPEDLNKDLQQVEK 365 + G W+ N L + G+S E + T P+DL + + V Sbjct: 285 PSVNYTLTRGEEGWVGTWMSHN--LTRMTGFSVAEALAQGWWARTVHPDDLERASRAVRA 342 Query: 366 LISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQ 425 + E Y E R +G V W + VR G + DI E ++ ++ + Sbjct: 343 V--EEDGHYVHEYRIRCADGGVRWIRDELRAVRDEGGRVVRVAGVWIDITEQRQATELLR 400 Query: 426 QLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQ 485 + E+ G+ +L I + ++ E+ + DR Sbjct: 401 LN----SAVIESTHDGVVLTDLDGAIVAVNRAFTEVTGYSRDEVVGQNPRFLQSGRHDRG 456 Query: 486 HAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA-NRVLNKEGEVERLLGINMDMTEVK 544 + +L+ ++ E K+G L N V N+ G V +G+ D++++K Sbjct: 457 -FYLSMWAALKEAGHWQGELWNRRKNGELFPEWLTLNAVRNEVGHVTHYVGVFTDISKLK 515 Query: 545 QLNEALFQEKER-----------LHITLDSIGEA---------VVCIDMAMKITFMNPVA 584 Q + L + L+ + V+ +D+ + +N Sbjct: 516 QTEDRLDYLAHHDPLTDLPNRLLVLSRLEHALDGAQRRGCRVAVMFLDLD-RFKTVNDSL 574 Query: 585 EKMSG--------------WTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQ 630 +G +E+ LG + + A + Sbjct: 575 GHAAGDELLRAVAARLRGALREEDTLGRLGGDEFMVLLEHVEAPADAAVVAKNLVEVLAA 634 Query: 631 DVVLHCRSGGSYDVHYSI-TPLSTLDGSNIGSVLVIQDVTE-SRKMLRQLSYSASHDALT 688 L +G + SI DG + +++ D K + +Y + L Sbjct: 635 PFAL--SNGHEVFIRASIGISFYPDDGDDFMTLVRNADAAMYRAKAQGRNTYGFYTEDLI 692 Query: 689 HLAN-RASFEKQLRILLQT 706 A R + E +LR L+ Sbjct: 693 RSATERLALETRLRRALEH 711 >UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9S8_MAGSM Length = 971 Score = 700 bits (1808), Expect = 0.0, Method: Composition-based stats. Identities = 151/696 (21%), Positives = 279/696 (40%), Gaps = 23/696 (3%) Query: 411 IEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKP 470 + E + ++ + + WE + + ++ + + + Sbjct: 273 LRLEREESLKQAAEKREELARIIEISHTVVLSWENDEEWSLSYVSENCYRIL----QSGL 328 Query: 471 NWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRI-TVKDGIRHIRALANRVLNKEGE 529 V V PED E ++ + KLEFR+ + R + + E Sbjct: 329 KSLVLKPLVNPEDLPQMEALLAAGGDASRWVKLEFRLCLGSEEPRWFECCVLPIKDDHAE 388 Query: 530 VERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSG 589 V + G+ D+TE ++ + + + EA++ KI +NP +++G Sbjct: 389 VVQYHGVLHDITERRKGE----HDLRLAQVLFRTTNEALMISSRDNKIEMVNPAFSRITG 444 Query: 590 WTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSIT 649 + +E LG + + + P ++ A A E ++ +SG +Y SI Sbjct: 445 YQLDEVLGKGPDLLQ--SGRHDAPFYTQMWHALQQDGAWEGEIWNRRKSGETYPEWLSIA 502 Query: 650 PLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNS 709 ++ G + V D+T+ ++ + + A++D LT L NR F +L+ L+ Sbjct: 503 TVTNDKGETVQYVAAFSDITKRKQAEETILHQANYDFLTDLPNRNLFHDRLQTELKRSQR 562 Query: 710 THQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLL 769 + Q+ AL+FIDLDRFK VND+ GH GD LLRE+A + +R SD +ARLGGDEF ++L Sbjct: 563 SGQQVALLFIDLDRFKFVNDTLGHNVGDQLLREVAIRLGHCVRESDTIARLGGDEFTVIL 622 Query: 770 PDCN-VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIA 828 P+ + E +A +I + + + + + AS GIT+ ++ +++ AD+A Sbjct: 623 PELHGPEGVARLAQGMIDKLEE-RYCIQDHELFISASIGITIYPEDADNMMDLVKNADVA 681 Query: 829 CYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARN 888 Y +K GRG Y + A + + + ++E Q + Sbjct: 682 MYRAKENGRGSFCFYTAEMNADARQLHKIEQALRV-ALEEGQFWIHYQPYVQQ--SSGLI 738 Query: 889 LWLISLKLWS-CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV--ASKGISI 945 + +L W GEI+ F + L + V A+ I+ Sbjct: 739 TGVEALIRWRNSAGEIVYPDQFIPVAEETGLIVPIGLWVLRSVIGVIAQWQREGHPDITF 798 Query: 946 SLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGC 1001 S+ +S LV + L+ + + P+ L L I ++ E +++++ G Sbjct: 799 SVNVSARQFQEGHLVGQIKAALQENQINPQSLMLEITESLMIRDPEHTLNMLKEIKALGV 858 Query: 1002 RIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTI 1061 R+ L G LK D L +D + + DE +++ I A LG+ I Sbjct: 859 RVALDDFGTGYSSLGYLKQFPIDLLKIDRSFINGIANSQDDETMVSAIVSMAHSLGVGVI 918 Query: 1062 AGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 + + ++ D + G + P D L Sbjct: 919 GEGIENDQQLQRVNLHACDYVQGFFYSRPMPYDELA 954 Score = 68.4 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 20/139 (14%), Positives = 47/139 (33%), Gaps = 1/139 (0%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 ER+ + + + + + + N A + GY +E+ G L Sbjct: 400 TERRKGEHDLRLAQVLFRTTNEALMISSRDNKIEMVNPAFSRITGYQLDEVLGKGPDLLQ 459 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 Q+ + + + E ++G+ L+++ V + G + ++A Sbjct: 460 SGRHDAPFYTQMWHALQ-QDGAWEGEIWNRRKSGETYPEWLSIATVTNDKGETVQYVAAF 518 Query: 412 EDINELKRTEQVNQQLMER 430 DI + K+ E+ Sbjct: 519 SDITKRKQAEETILHQANY 537 >UniRef50_D2M1V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2M1V4_BACS4 Length = 840 Score = 700 bits (1806), Expect = 0.0, Method: Composition-based stats. Identities = 172/808 (21%), Positives = 343/808 (42%), Gaps = 21/808 (2%) Query: 294 RKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWP 353 + + +E +++ + + + + N A GY EE+ F Sbjct: 24 KDELLRTEQRYKSLFHNNPTPIFTMNSSFMLDSCNDAFYILTGYLIEEIHD-NFHTFIRK 82 Query: 354 EDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIED 413 ++K ISGE N ++ N+ G + LL++ + + I D Sbjct: 83 SQQAYTTDCMKKAISGEANQLNIF--IVNKQGKEIEVLLSLIPITVNE-RIEGIYGVIRD 139 Query: 414 INELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP--HIKPN 471 I++L+ E+ + + A IG W+++ + W K+MF ++ + + P+ Sbjct: 140 ISQLRIYEKNLSFIERSLNNAQYIANIGSWDYDPHNDKLYWSKQMFRIFGLDEKTNTAPS 199 Query: 472 WQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGI-RHIRALANRVLNKEGEV 530 + + + V +DR I+D+++ + F E RI KDG+ R ++ N +++ EG V Sbjct: 200 MEQYLKYVHHDDRLRDIVAIQDAMEKKKSFNYESRIFRKDGMKRIVKIQGNPIIDNEGNV 259 Query: 531 ERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMK-ITFMNPVAEKMSG 589 +++G D+TE K+ N+ L +++ I +++ E + ID++ + + F + E++ G Sbjct: 260 VKIIGNTHDITEQKEANQRLVDNEKQARIIFNNLDEIIWSIDISSRKVIFCSNGFEQLFG 319 Query: 590 WTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSIT 649 + ++ + L I D + E + + + + ++ + + S + Sbjct: 320 YCLDDLIDERQLWQKVIHEEDIKGIPEKLIT-LSQGNQLKFECRVQHTSAEVRWIEIKAL 378 Query: 650 PLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNS 709 P+ G I +I+D+TE +K+ ++ + A HD LT+L NR SF+ +L L+ Sbjct: 379 PIIDDLGDFIRVDGIIRDITEKKKLDAKMHHIAHHDHLTNLPNRRSFDIKLHELIHHAKK 438 Query: 710 THQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLL 769 T ++ ++D+DRFK VND GH GD LL+E++ + +L S +AR GDEF +LL Sbjct: 439 TKSIFSVFYLDIDRFKHVNDMLGHNYGDDLLKEISYRLKQVL-QSHFIARTSGDEFAVLL 497 Query: 770 PDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIAC 829 D E A I++ + I E + V AS GI + A ++ AD A Sbjct: 498 HDVTEEEVIVFAHNIVNVMRQAFHISEVESY-VTASIGIAFYPKDGENAVTLLKNADTAL 556 Query: 830 YASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNL 889 +K G+ Y P+ + D + +++ + + + + + Sbjct: 557 SFAKIDGKDNYKHYIPEMNEDSHNIYFLEKDMRL-ALEKEEFYLEYQPKIDVKTK--KVI 613 Query: 890 WLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA--VASKGISIS 946 +L W + I+ F + L + V + +Q K + +S Sbjct: 614 GCEALIRWTHPKRGIVSPAQFIPIAEESDLICDIGNWVIKKVCKQLKKWHLEGINTVPVS 673 Query: 947 LPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCR 1002 + +S L +L++ + L+ + + P LL L I +++ + +++ L+ G + Sbjct: 674 INISAQHLLKTSLLDTIFTALKANHVSPSLLELEITETSLIQPNQSVFSTIRSLKKLGVK 733 Query: 1003 IVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIA 1062 + L G ++ D L +D + V D ++I+ I A LG+ +A Sbjct: 734 LSLDDFGVGYSSLTHIRKFPLDTLKIDKSFISKVPTEKDDAVIISSIIEMAHGLGLTILA 793 Query: 1063 GPVVLPLVMDTLSGIGVDLIYGEVIADA 1090 V + L D I G + + Sbjct: 794 EGVETEEQLLFLEEKNCDHIQGFLFSKP 821 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 107/280 (38%), Gaps = 8/280 (2%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + R K++S E NA + IG L +K + + G ++ + Sbjct: 140 ISQLRIYEKNLSFIERSLNNAQYIANIGSWDYDPHNDKLYWSKQMFRIFGLDEKTNTAPS 199 Query: 347 FQQ---LTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGT 403 +Q +D +D+ ++ + + +++ E R + ++G + + + +G Sbjct: 200 MEQYLKYVHHDDRLRDIVAIQDAMEKK-KSFNYESRIFRKDGMKRIVKIQGNPIIDNEGN 258 Query: 404 PLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPN-IFSWDKRMFELY 462 + I DI E K Q ++ + IW ++ + +L+ Sbjct: 259 VVKIIGNTHDITEQKEANQRLVDNEKQARIIFNNLDEIIWSIDISSRKVIFCSNGFEQLF 318 Query: 463 EI-PPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD-GIRHIRALA 520 + Q+W + + ED + + + +L + K E R+ +R I A Sbjct: 319 GYCLDDLIDERQLWQKVIHEEDIKGIPEKLI-TLSQGNQLKFECRVQHTSAEVRWIEIKA 377 Query: 521 NRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHIT 560 +++ G+ R+ GI D+TE K+L+ + H+T Sbjct: 378 LPIIDDLGDFIRVDGIIRDITEKKKLDAKMHHIAHHDHLT 417 >UniRef50_B0C6M6 PAS sensor diguanylate cyclase/phophodiesterase, putative n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C6M6_ACAM1 Length = 935 Score = 698 bits (1803), Expect = 0.0, Method: Composition-based stats. Identities = 191/810 (23%), Positives = 361/810 (44%), Gaps = 43/810 (5%) Query: 306 NAMEYSAIGMALVG---TEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQ 362 A E + G+ + + + + QF GY+ +E+ G + L P+ + + Sbjct: 144 LAAETANDGIVISDATVPGFPVIFASPSFYQFTGYTPDEVIGNSCHFLQGPKTDPNTVDE 203 Query: 363 VEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQ 422 + + + + T+ E Y + G W LL + + + G + + DI + K TE+ Sbjct: 204 IRQALKND-QTFEGEILNYRKMGQPFWNLLRIKPLTNAQGEVHFLVGIQTDITQQKETEE 262 Query: 423 VNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFE--------LYEIPPHIKPNWQV 474 +Q + G + + + + + E + Sbjct: 263 RLRQYET----IFNSAGSYMALVDTCYEYLAANPQYTEKFHKATTEISGQSMAKVHGQPF 318 Query: 475 WYECVLPE-DRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERL 533 + E + P+ DR + + +R + + D R+ N++ ++ Sbjct: 319 FQEIIKPDLDRCFSGEKVRR----------QHWVPSLDEARYFDIEYVPFRNQQEQIIGA 368 Query: 534 LGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQE 593 D+T +K EAL + ++R H + D ++ T+++ ++G E Sbjct: 369 AISARDITVLKDTEEALRESQQRFHDFAAIGADLFWETDAELRFTYLSEQHCSLTGSPIE 428 Query: 594 EALGVPLLT---VLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITP 650 +G L V T D+ + + + ++ G + + P Sbjct: 429 AWIGKSCLDFYAVFKPTAWDH------LNQTLDALEPFDIEIECQHLDGNARVLRSIGKP 482 Query: 651 LSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNST 710 + + G G + +D+TE+ + +QL++ A+HD+LT L NR FE QL +++ S Sbjct: 483 VFSPQGVFCGYRGIGRDITEAHSLSQQLTHQATHDSLTGLVNRREFEHQLGQIIEEKQSN 542 Query: 711 HQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLP 770 +HAL F+DLD+FK VND+ GH AGDALL+++A L+ + +R +D+L+RLGGDEFGLLL Sbjct: 543 PIQHALCFLDLDQFKIVNDTVGHLAGDALLKQVADLLQAHIRQTDILSRLGGDEFGLLLK 602 Query: 771 DCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACY 830 +C++E AR + +IS ++ + FIWEG++ ++GAS GI I + + ++AD+ACY Sbjct: 603 NCSLEKARIVTENLISELSQFRFIWEGQLFKIGASIGIVPITADTDNLTLLFAKADVACY 662 Query: 831 ASKNGGRGRVTVYEPQQAAAHSERAA-MSLDEQWRMIKENQLMMLAHGVASPRIPE-ARN 888 ++K+ GR RV +Y Q + + M + + ++E++ + + Sbjct: 663 SAKDRGRNRVHLYHAQAQGVTEQHSELMQVATIRKALEESRFRLYYQPIVPLDTETKIPV 722 Query: 889 LWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFF-QQAAKAVASKGISISL 947 + I L+L +G+I+ +F + L +D+ V + A + + IS+ Sbjct: 723 CYEILLRLQDTDGKILSPNSFLPAAERYGLMLEIDKWVIENVLIKYGAYFQSQENTRISI 782 Query: 948 PLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH----AESVQKLRLAGCRI 1003 LS + L L++ + QL + L P + I + + + ++K++ GC Sbjct: 783 NLSGSSLDDDALLDFIQTQLNKTQLEPHKICFEITETVAISNFKQAIQCIEKIKEFGCHF 842 Query: 1004 VLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAG 1063 L G F+ LK DYL +DG L ++ + +++++ I + + +KTIA Sbjct: 843 ALDDFGSGFSSFSYLKRFPIDYLKIDGSLVRDMVEDATHQVMVSAINQICRAMHIKTIAE 902 Query: 1064 PVVLPLVMDTLSGIGVDLIYGEVIADAQPL 1093 V + L IGVD + G + QPL Sbjct: 903 FVENGDTIVALEQIGVDYLQGYAMGKPQPL 932 Score = 113 bits (283), Expect = 5e-23, Method: Composition-based stats. Identities = 68/384 (17%), Positives = 135/384 (35%), Gaps = 27/384 (7%) Query: 311 SAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGE 370 S +G+A++ + G + Q N C+ S EL G +++++ E + Q+++L+ G+ Sbjct: 25 SDVGIAIISSSGYFQQVNATFCEITNISVHELIGYHYREISQLEQFTEFATQLQQLLQGD 84 Query: 371 INTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMER 430 + + E + N + L V V +D +++ I+ + + + + Sbjct: 85 LGVFHFEATHQNAKAQNLPCLYTVMSVHGSDPADKTLCLKLQYIH---PDQDLQKATLCL 141 Query: 431 ITLANEAGGIGIWEWELK-PN--IFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHA 487 LA E GI + P + ++ P + D Sbjct: 142 RALAAETANDGIVISDATVPGFPVIFASPSFYQFTGYTPDEVIGNSCHFLQGPKTDPNTV 201 Query: 488 EKVIRDSLQSRSPFKLE---FRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVK 544 ++ IR +L++ F+ E +R + + N +GEV L+GI D+T+ K Sbjct: 202 DE-IRQALKNDQTFEGEILNYRKMGQPF--WNLLRIKPLTNAQGEVHFLVGIQTDITQQK 258 Query: 545 QLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVL 604 + E L Q + +S G + +D + NP + E G + V Sbjct: 259 ETEERLRQYE----TIFNSAGSYMALVDTCYEYLAANPQYTEKFHKATTEISGQSMAKV- 313 Query: 605 HITFGDNGPLMENIYSADTSR----SAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIG 660 P + I D R + + + + P IG Sbjct: 314 -----HGQPFFQEIIKPDLDRCFSGEKVRRQHWVPSLD-EARYFDIEYVPFRNQQEQIIG 367 Query: 661 SVLVIQDVTESRKMLRQLSYSASH 684 + + +D+T + L S Sbjct: 368 AAISARDITVLKDTEEALRESQQR 391 >UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=C6D7W4_PAESJ Length = 1095 Score = 698 bits (1802), Expect = 0.0, Method: Composition-based stats. Identities = 177/808 (21%), Positives = 324/808 (40%), Gaps = 27/808 (3%) Query: 301 ETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDL 360 E + ++ ++ +G L N A + GY+++E + F Q PEDL + + Sbjct: 140 EQRYITLLKNMFSAAFIIDLQGNILDVNDAAVKLTGYNKQE--HVHFSQFINPEDLEQAM 197 Query: 361 QQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRT 420 ++ + GE ++ + ++NG V + +S + D I DI++ R Sbjct: 198 AYNQRALEGETLSFQIS--ILHKNGHNVDVMTTLSPIYMHD-QITGIIGISNDISDETRN 254 Query: 421 EQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVL 480 +Q+ Q +R E I ++L N + + + + + V Sbjct: 255 KQLFQINKQRYESLFEQNPDAISYFDLNGNFMDCNSALENILGYSREELL-YSNYSHLVA 313 Query: 481 PEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDM 540 +R A +LQ + E K G L + + + + I D+ Sbjct: 314 EYERDRARFYFDQALQG-TVQSYELVCLHKQGHLVYMKLTKLPITVDNRIVGIYSIAKDI 372 Query: 541 TEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPL 600 T KQ AL + + + ++ V I I + NP M G+ E +G+ + Sbjct: 373 TTKKQAENALIEAESKYRSLVEKSIVGVYII-QKNIILYANPYLIDMLGYK-EAIIGMSI 430 Query: 601 LTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIG 660 +++ D + +NI AI + + G DV + GS Sbjct: 431 WDIVYPD--DYSVVKQNIQILYNETDAIRHPLRVLTAEGKLLDVEMYSNRIM-YQGSP-A 486 Query: 661 SVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFID 720 + I DVTE ++ ++ A HD+LT L NR FE+ L L+T + + A++++D Sbjct: 487 VIGTILDVTERKRAEELNAFLAYHDSLTELPNRRKFEEMLENALETAKTARRHFAVMYLD 546 Query: 721 LDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARF 779 +DRFK +NDS GHA GD LL + + +R +D AR+GGDEF ++LP + SA Sbjct: 547 MDRFKYINDSLGHAVGDQLLIAFSKRLQEQIRETDFAARMGGDEFTVILPHIRDNNSAIE 606 Query: 780 IATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGR 839 +A RII + F E + S GI++ ++ ++ +M AD A + +K+ G+ Sbjct: 607 VARRIIERTRE-PFYIEDYELFITTSIGISIYPNDGDDSSTLMKNADSALFRAKDLGKNG 665 Query: 840 VTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-S 898 ++ + + D + + I+ ++L M + I + +L W Sbjct: 666 YQIFTSSMNVQTYKVFTLEKDLR-KAIQRDELEMYYQPKVN--IHTGEIVGAEALIRWNH 722 Query: 899 CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV--ASKGISISLPLSVAGLSS 956 E ++ F + L +L V +Q + K I IS+ ++ S Sbjct: 723 PEWGLVSPNEFIPISEETGLILSLGNWVKRTVCRQNKEWQLAGLKPIPISINVTAKRFLS 782 Query: 957 ATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESV----QKLRLAGCRIVLSQVGRDL 1012 ++ + + L + L P L + I ++L++AE+V L G I L G Sbjct: 783 KDFMDAIQQILAETGLEPHYLEIEITESSLLENAETVMHTLDSLNKLGVTISLDDFGTGY 842 Query: 1013 QIFNSLKANM--ADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLV 1070 + LK + L +D ++ D +I+ I AQ + M +A V Sbjct: 843 SSLSYLKRFKHTINILKIDRSFIHDLHQGSDDNAIISAIIQLAQHMNMSVVAEGVETGEQ 902 Query: 1071 MDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 + L + DL+ G + + + Sbjct: 903 LHILKLLKCDLVQGYLFSRPVQAEAFAQ 930 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 62/373 (16%), Positives = 142/373 (38%), Gaps = 18/373 (4%) Query: 306 NAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEK 365 ++ + L G+ ++ N+A LGYS EE + LT+ L + + +K Sbjct: 28 TMFDFRSDIFLLFDHNGRLIEANQAFTDTLGYSLEEFKHLTYGSLLPGNQRQRAKEHFQK 87 Query: 366 LISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQ 425 L+ GEI + E R ++ G + + + D F A +D++++K Sbjct: 88 LLHGEIQIF--EIRVLHKTGQFIDLTVTAFPRKLND-AIDGFYAIAKDLSDIKL------ 138 Query: 426 QLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQ 485 + +R + + +L+ NI + +L ++ + + PED + Sbjct: 139 -MEQRYITLLKNMFSAAFIIDLQGNILDVNDAAVKLTGYNKQEHVHFSQF---INPEDLE 194 Query: 486 HAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQ 545 A + +L+ + + I K+G + ++ ++GI+ D+++ + Sbjct: 195 QAMAYNQRALEGET-LSFQISILHKNGHNVDVMTTLSPIYMHDQITGIIGISNDISDETR 253 Query: 546 LNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLH 605 + K+R + +A+ D+ N E + G+++EE L ++ Sbjct: 254 NKQLFQINKQRYESLFEQNPDAISYFDLNGNFMDCNSALENILGYSREELLYSNYSHLVA 313 Query: 606 ITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVI 665 D + + ++V + G + + P+ T+D +G + Sbjct: 314 EYERDRARFY---FDQALQGTVQSYELVCLHKQGHLVYMKLTKLPI-TVDNRIVGIYSIA 369 Query: 666 QDVTESRKMLRQL 678 +D+T ++ L Sbjct: 370 KDITTKKQAENAL 382 Score = 73.4 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 32/152 (21%), Positives = 69/152 (45%), Gaps = 5/152 (3%) Query: 283 MTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEEL 342 + + + + E+E+ +R+ +E S +G+ ++ L N L LGY +E + Sbjct: 368 IAKDITTKKQAENALIEAESKYRSLVEKSIVGVYIIQKNI-ILYANPYLIDMLGY-KEAI 425 Query: 343 RGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDG 402 G++ + +P+D + Q + +++ E + R G ++ + + + + G Sbjct: 426 IGMSIWDIVYPDDYSVVKQNI-QILYNETDAIRHPLRVLTAEGKLLDVEMYSNRIMY-QG 483 Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLA 434 +P I I D+ E KR E++N L +L Sbjct: 484 SPA-VIGTILDVTERKRAEELNAFLAYHDSLT 514 Score = 54.5 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 17/144 (11%), Positives = 51/144 (35%), Gaps = 7/144 (4%) Query: 536 INMDMTEVKQLNEALFQEKERLHI-TLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEE 594 +D + + E + E + D + + D ++ N G++ EE Sbjct: 4 FKLDFLKRNKRQEDIPILSEWFNTTMFDFRSDIFLLFDHNGRLIEANQAFTDTLGYSLEE 63 Query: 595 ALGVPLLTVLHITFGDNG-PLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLST 653 + ++L + + + ++ + ++G D+ + P Sbjct: 64 FKHLTYGSLLPGNQRQRAKEHFQKLLHGEIQI----FEIRVLHKTGQFIDLTVTAFP-RK 118 Query: 654 LDGSNIGSVLVIQDVTESRKMLRQ 677 L+ + G + +D+++ + M ++ Sbjct: 119 LNDAIDGFYAIAKDLSDIKLMEQR 142 >UniRef50_Q31NI4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Synechococcus elongatus RepID=Q31NI4_SYNE7 Length = 929 Score = 698 bits (1801), Expect = 0.0, Method: Composition-based stats. Identities = 194/812 (23%), Positives = 329/812 (40%), Gaps = 41/812 (5%) Query: 296 HISESETHFRNAMEYSAIGMALVGTEG-QWLQTNKALCQFLGYSQEELRGLTFQQLTWPE 354 ++ESE+ +R E + M + +G Q+L N+A QF GYSQ+E +T + E Sbjct: 135 RLAESESRYRLLFEANPEPMWVFAKQGLQFLAVNQAASQFFGYSQQEFLAMTVLDIQSEE 194 Query: 355 DLNKDLQQVEKLISGEINTYSMEKR-YYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIED 413 + + LQ E LI +I ++ Y ++ G +V+A + + D P I I D Sbjct: 195 EKTRFLQFFESLICNQIVDPAVGVWAYRHKQGHLVFADVLIHDFEF-DNQPCCLILAI-D 252 Query: 414 INELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQ 473 I E + ++ Q + + I + +L ++ + Sbjct: 253 ITEKQAARELAHQREQAFRKLLNDNRDPLLVISGDRRICYANPAAQKLLKLNLEQLESQS 312 Query: 474 VWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERL 533 + D + E+ +T+ DG + + EG+ L Sbjct: 313 L--------DLPLLSDKLT-----------EWALTLPDGSVAEVEIHRSETDWEGQPADL 353 Query: 534 LGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQE 593 L + D+ E K + L KE L + + + V I+ M + ++NP E+++G+++ Sbjct: 354 LSL-RDIAERKASEQQLRLLKESLEASFNGV-VIVDAIEPDMPVIYVNPAFERITGYSEA 411 Query: 594 EALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLST 653 E LG + + +E I+ + + + + G + I+P+ Sbjct: 412 EMLGRNCRILQ--GNERDSLQIEEIHRGLSQAENVHVVIRNFRKDGQPFWNDLYISPIFN 469 Query: 654 LDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQR 713 G+ + V D+TE ++ +LS+SASHD LT L NRA E +LR + Sbjct: 470 AQGNVTHFIGVQNDITEQKRYEEELSFSASHDVLTGLPNRAVLEDRLRQGCKMALRQKHS 529 Query: 714 HALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN 773 A++FIDLD FK +NDS GH +GD LL E+A M +R+ D +AR+GGDEF +LL D Sbjct: 530 LAILFIDLDGFKLINDSIGHRSGDLLLVEVAQRMCEQVRAGDTVARIGGDEFIILLVDLK 589 Query: 774 VE-SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYAS 832 +E IA R++++V + +G V AS GITL D + Q +++ QAD+A Y + Sbjct: 590 LENDVISIADRLLASVAR-PYHIQGIYLHVTASMGITLSDGDIEQPTQLIQQADLAMYKA 648 Query: 833 KNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLI 892 K GR Y ER + + Q + I+ + + + L Sbjct: 649 KQEGRNNYQWYTNDLNLRLRERVHLRNELQ-KAIETEAFELYFQPKIEG--CSGQVIGLE 705 Query: 893 SLKLWSCEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGI---SISLP 948 +L W I TF D L + V +Q + + +GI S+++ Sbjct: 706 ALLRWQHPQMGFISPATFVPIAEDTGQIIPLSQWVLETACRQL-RDLLQQGIAAPSVAVN 764 Query: 949 LSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRLAGCRIV 1004 +S V + L+ L L + I + D+ E +Q+L+ G I Sbjct: 765 ISTVQFRRINFVKSVQSALQKYQLKSEHLEIEITENVLFDNTEKAIEKLQRLKELGVNIS 824 Query: 1005 LSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGP 1064 + G + LK D + +D + + D + I A L + +A Sbjct: 825 IDDFGTGFSSLSYLKELPIDTVKIDRSFVQEINTDSRDAAITQGIISMAHHLRLNVVAEG 884 Query: 1065 VVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 V L D G A P + L Sbjct: 885 VETEQQFKFLQQSNCDQYQGYYFAKPMPFEAL 916 Score = 78.8 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 44/273 (16%), Positives = 93/273 (34%), Gaps = 30/273 (10%) Query: 281 NIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQE 340 I+ + + +A R+ + E FR + + + ++ + + N A + L + E Sbjct: 247 LILAIDITEKQAARELAHQREQAFRKLLNDNRDPLLVISGDRRICYANPAAQKLLKLNLE 306 Query: 341 ELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHT 400 +L + DL L+S ++ +++ +G V + Sbjct: 307 QLESQSL-------DLP--------LLSDKLTEWALTL----PDGSVAEVEIH-RSETDW 346 Query: 401 DGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWE---LKPNIFSWDKR 457 +G P ++ + DI E + ++Q + + + EA G+ + + + Sbjct: 347 EGQPADLLS-LRDIAER----KASEQQLRLLKESLEASFNGVVIVDAIEPDMPVIYVNPA 401 Query: 458 MFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIR 517 + D E+ I L + R KDG Sbjct: 402 FERITGYSEAEMLGRNCRILQGNERDSLQIEE-IHRGLSQAENVHVVIRNFRKDGQPFWN 460 Query: 518 AL-ANRVLNKEGEVERLLGINMDMTEVKQLNEA 549 L + + N +G V +G+ D+TE K+ E Sbjct: 461 DLYISPIFNAQGNVTHFIGVQNDITEQKRYEEE 493 >UniRef50_A0LKD9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKD9_SYNFM Length = 844 Score = 698 bits (1801), Expect = 0.0, Method: Composition-based stats. Identities = 149/701 (21%), Positives = 273/701 (38%), Gaps = 21/701 (2%) Query: 408 IAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPH 467 +A + + ++ E+ + + +GI + ++R+ E+ Sbjct: 139 LALYRERVIRHHKTRELRESEEKFRVTFDQAPVGIAHVNADGRLLLINRRLCEMLGFQER 198 Query: 468 IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFK-LEFRITVKD-GIRHIRALANRVLN 525 CV PE+R E+ ++ S++ + E + KD I + + + + Sbjct: 199 ELIESSFPDLCV-PENRDVHERELKKSVEQGLEYHGFEIPLVHKDGRIIWTKLTLSPMKD 257 Query: 526 KEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAE 585 G + + I D+TE K + L + EA++ D I +N Sbjct: 258 AAGVPKYFIHIVEDITERKNFEDNLRLS----ATVFEGSTEAIIITDARANILRVNSAFT 313 Query: 586 KMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVH 645 M+G+ E +G + + + +++ +S + ++ ++G + Sbjct: 314 AMTGYADHEVVGKNPRLLK--SGNHHEEFYRAMWATLSSTGQWQGEIWNRRKNGDIFPAW 371 Query: 646 YSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQ 705 ++ + + V + +D+T ++ +LSY ASHDALT L NRA F +L L Sbjct: 372 LTLCAVRNSEDKITNYVGISRDITLRKEAEERLSYQASHDALTGLPNRARFHDRLTHALA 431 Query: 706 TVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEF 765 A++F+DLDRFK +ND+ GH GD LL+ + +L R SD LAR GGDEF Sbjct: 432 RAGRDRHEFAILFLDLDRFKVINDTLGHTVGDFLLQGVTKRLLGGTRESDTLARWGGDEF 491 Query: 766 GLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQ 824 +LL E A A RI+ + + F +G V S GI++ + ++ Sbjct: 492 IILLESIRGAEDAAVAARRILDVLAE-PFSVQGHEVFVSGSIGISVYPRDGEDVQALLRC 550 Query: 825 ADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIP 884 ADIA Y +K+ G+ YE + ER + D ++ +K N+ ++ I Sbjct: 551 ADIAMYRAKDSGKNDYQFYESTMSTGGLERLKLEGDLRY-ALKRNEFVLHYQP--RVNIN 607 Query: 885 EARNLWLISLKLWS-CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS--K 941 + +L W + ++ F + + V Q K + Sbjct: 608 TGLIVGAEALIRWDLPDRGLLWPLDFIPLAEESGFIIPIGEWVLRTACLQCRKWQDAGVP 667 Query: 942 GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLR 997 +S+ LS L + + L+ + L P LL L I A++++ E ++Q L Sbjct: 668 HPRVSVNLSTHQFKKDNLTSTVDRILKETGLSPGLLELEITESAMMENLEKAVATLQGLA 727 Query: 998 LAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLG 1057 G + + G LK L +D ++ N+ D + I + L Sbjct: 728 ELGVNVAIDDFGTGYSSLGYLKRFPIGALKIDQSFVRHIPSNIDDTAIAMSIISLGKTLN 787 Query: 1058 MKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 +K +A V + L D G + + D + Sbjct: 788 LKVVAEGVETQEQLTVLRNYQCDEAQGYLFSQPVDADRMTE 828 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 64/280 (22%), Positives = 119/280 (42%), Gaps = 14/280 (5%) Query: 284 TMVMYAFRAER----KHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQ 339 + +Y R R + + ESE FR + + +G+A V +G+ L N+ LC+ LG+ + Sbjct: 138 ALALYRERVIRHHKTRELRESEEKFRVTFDQAPVGIAHVNADGRLLLINRRLCEMLGFQE 197 Query: 340 EELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRH 399 EL +F L PE+ + ++++K + + + E +++G ++W L +S ++ Sbjct: 198 RELIESSFPDLCVPENRDVHERELKKSVEQGLEYHGFEIPLVHKDGRIIWTKLTLSPMKD 257 Query: 400 TDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMF 459 G P YFI +EDI E K E + E I + + NI + Sbjct: 258 AAGVPKYFIHIVEDITERKNFEDNLRLSAT----VFEGSTEAIIITDARANILRVNSAFT 313 Query: 460 ELYEIPPH--IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIR 517 + H + N ++ E+ + + +L S ++ E K+G Sbjct: 314 AMTGYADHEVVGKNPRLLKSGNHHEE---FYRAMWATLSSTGQWQGEIWNRRKNGDIFPA 370 Query: 518 ALAN-RVLNKEGEVERLLGINMDMTEVKQLNEALFQEKER 556 L V N E ++ +GI+ D+T K+ E L + Sbjct: 371 WLTLCAVRNSEDKITNYVGISRDITLRKEAEERLSYQASH 410 >UniRef50_Q30T73 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30T73_SULDN Length = 707 Score = 697 bits (1800), Expect = 0.0, Method: Composition-based stats. Identities = 159/710 (22%), Positives = 309/710 (43%), Gaps = 21/710 (2%) Query: 398 RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKR 457 + D Y I +++ + + L+ + A E IG W+ + N W Sbjct: 5 HNDDSFAFYGINSDSIVDQSNIDIETIKSLIRNLNEAQEIAQIGHWKLNINTNELFWSDE 64 Query: 458 MFELYEIPP-HIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRH 515 + ++ + P +KP+++ ++ V +DR SL+ +SP+ + RI KD +++ Sbjct: 65 TYRIFGLKPKEVKPSYENFFTFVHEDDRSLVNDAYIKSLEDKSPYSIIHRIITKDKKLKY 124 Query: 516 IRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAM 575 + L++ G V + +G D+TE + + L E + +V D Sbjct: 125 VEERCVHKLDESGNVVKSIGTVHDITERVEHEKEL----EIASNVFKYSSDGIVITDKNN 180 Query: 576 KITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLH 635 I +N EK++G+++EE +G +L +GD +N++S+ S ++ Sbjct: 181 NIVSVNKSFEKLTGYSKEEIIGKNP-KLLSSGWGDE-EFYKNMWSSLLSNDLWRDELWDR 238 Query: 636 CRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRAS 695 + G Y + +I + + + + + +D+TE++ ++ A +D LT L N Sbjct: 239 KKDGSLYAIEQTIICVRDKNQDIVNYIGMSRDITEAKNKEEKIHQLAFYDFLTKLPNAKL 298 Query: 696 FEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSD 755 F++++ +++ + ++ A++F+DLD FK VNDS GH GD LL E+A+ + ++ Sbjct: 299 FQQEVEAYIKSTHYNNETFAILFLDLDNFKWVNDSLGHQIGDLLLIEIAAKLKEIISQDS 358 Query: 756 VLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNN 815 +++RLGGDEF +L P N+ + +A I+ +V D + R V S GI+L N Sbjct: 359 IISRLGGDEFVILAPYENLLTISQLANTILCSVKD-PIKVQNREVNVSWSIGISLYPQNG 417 Query: 816 HQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWR-MIKENQLMML 874 +++ AD A Y SKN G+ + R + LD + R I N + Sbjct: 418 ENYNDLLKNADAAMYESKNRGKNTFRYFNDMMNQDAMYR--LELDTKLRYAITNNSFFLN 475 Query: 875 AHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQ 933 S + + + +L W + I F + + + + V + Sbjct: 476 YQPKYSF--EHGKTIGVEALIRWIDKDLGFIAPDKFIPIAEESSYINEIGSWVMKQALND 533 Query: 934 AA--KAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE 991 + S ISIS+ +S L + ++ L+ S + P L+ I +I+ + + Sbjct: 534 LKIINSKLSSPISISINVSGKQLEHESFYDEARTLLKESGIEPSLVEFEITETSIMQNID 593 Query: 992 SV----QKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLIT 1047 V +K+++ G +I + G + LK D L +D E ++ + + ++ Sbjct: 594 HVVDILKKIKMLGVKISIDDFGTGYSSMSYLKKLPIDTLKIDREFIKELEIDEDSKSIVN 653 Query: 1048 IIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 I A+ + T+A V L G+ D+ G + + LD L+ Sbjct: 654 AIIALAKSFKLTTVAEGVENEEQKLILDGLNCDMTQGYLYSRPLSLDDLL 703 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 44/260 (16%), Positives = 83/260 (31%), Gaps = 21/260 (8%) Query: 302 THFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGL--TFQQLTWPEDLNKD 359 + A E + IG + L + + G +E++ F +D + Sbjct: 36 RNLNEAQEIAQIGHWKLNINTNELFWSDETYRIFGLKPKEVKPSYENFFTFVHEDDRSLV 95 Query: 360 LQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKR 419 K + + + YS+ R ++ + + G + I + DI E Sbjct: 96 NDAYIKSLEDK-SPYSIIHRIITKDKKLKYVEERCVHKLDESGNVVKSIGTVHDITERVE 154 Query: 420 TEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNW------Q 473 E+ + GI + NI S +K +L Sbjct: 155 HEKELEIASNVFKY----SSDGIVITDKNNNIVSVNKSFEKLTGYSKEEIIGKNPKLLSS 210 Query: 474 VWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD-GIRHIRALANRVLNKEGEVER 532 W + + K + SL S ++ E KD + I V +K ++ Sbjct: 211 GWGD-------EEFYKNMWSSLLSNDLWRDELWDRKKDGSLYAIEQTIICVRDKNQDIVN 263 Query: 533 LLGINMDMTEVKQLNEALFQ 552 +G++ D+TE K E + Q Sbjct: 264 YIGMSRDITEAKNKEEKIHQ 283 Score = 77.2 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 64/174 (36%), Gaps = 6/174 (3%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 ER + N +YS+ G+ + + NK+ + GYS+EE+ G + L+ Sbjct: 150 TERVEHEKELEIASNVFKYSSDGIVITDKNNNIVSVNKSFEKLTGYSKEEIIGKNPKLLS 209 Query: 352 WP-EDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQ 410 D L+S + + E ++G + + VR + + +I Sbjct: 210 SGWGDEEFYKNMWSSLLSN--DLWRDELWDRKKDGSLYAIEQTIICVRDKNQDIVNYIGM 267 Query: 411 IEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKP--NIFSWDKRMFELY 462 DI E K E+ QL + +++ E++ ++ F + Sbjct: 268 SRDITEAKNKEEKIHQLAFY-DFLTKLPNAKLFQQEVEAYIKSTHYNNETFAIL 320 >UniRef50_A6UJR0 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=Alphaproteobacteria RepID=A6UJR0_SINMW Length = 1071 Score = 697 bits (1799), Expect = 0.0, Method: Composition-based stats. Identities = 177/827 (21%), Positives = 332/827 (40%), Gaps = 41/827 (4%) Query: 290 FRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQ 349 R + ESE FR + + + + + G N+ + G ++ E G + Sbjct: 257 RRRAADALRESEARFRAIADDAPVMIWVADPTGDTSFFNRLWLETTGQTEAEALGFGWVD 316 Query: 350 LTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIA 409 + P+D + K +G+ T S E R +G W + DGT L ++ Sbjct: 317 VIHPDDRQAVQEIFFKATAGKGPTRS-EYRLRRADGSWAWVIDVGQPRFSADGTFLGYVG 375 Query: 410 QIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIK 469 + DI + + E Q+ I ++ + +L+ ++ ++ + Sbjct: 376 SVLDITDRRAGEIAQQEAQAFIRSIFDSSPDCVRVLDLEGRPLLMNEAGRRIFGLNEDAP 435 Query: 470 PNWQVWYECVLPEDRQHAEKVIRDSLQSRSP-FKLEFRITVKDGIRHIRALANRVLNKEG 528 Q W D E ++ F++ R R + +A + + G Sbjct: 436 ITGQTWDSIGRASDAHKVEAGWESVRHGKTARFEITVR-DAGGEERCMDVIAAPITDNLG 494 Query: 529 EVERLLGINMDMTEVKQLNEALFQEKER-------LHITLDSIGEAVVCIDMAMKITFMN 581 + R+L I D+T+ K ++ + + ++ L L+S ++V+ +D ++ ++N Sbjct: 495 KPSRILSIWRDITDAKLASDEISRAQKHAEAAASQLSSVLESTMDSVMLLDADWRVRYLN 554 Query: 582 PVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGS 641 A+K+ +EALG + + G ++ R + H S G Sbjct: 555 ENAKKLLQIG-DEALGKKFWKLFPE--EEMGNFAKHCREVMERR--VRSFFEDHLPSLG- 608 Query: 642 YDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLR-------QLSYSASHDALTHLANRA 694 + + +P G + +D+TE R+ QL++ A HD LT L NR Sbjct: 609 RWIEANASPTQD------GISIFCRDITERRRAEEDTLLAQKQLAHMARHDMLTGLPNRM 662 Query: 695 SFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSS 754 F + L H R A++ +DLD FKA+ND+ GH AGD LLR+++ ++ +R++ Sbjct: 663 FFRECFEQALNESR--HARMAVLCLDLDGFKAINDTLGHPAGDVLLRQVSQRLIQSVRTT 720 Query: 755 DVLARLGGDEFGLLLP-DCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDD 813 + +ARLGGDEF ++ P + + A +A R+I +++ F EG VG S GI + Sbjct: 721 ETVARLGGDEFAIIQPLAKSRDEAFHLAQRLIDTLSE-PFSIEGAAATVGTSIGIAFAPE 779 Query: 814 NNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMM 873 + A E++ ADIA Y++K+ GRG +++ A M + + + + + Sbjct: 780 DGTSADELIKAADIALYSAKSSGRGTYRLFDVAMHAQLQAHQQMKVAMR-DALANREFEL 838 Query: 874 LAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQ 933 + + L+ + +I F + + + E +Q Sbjct: 839 HYQPLVNLESRCVSCC-EALLRWRHPQRGMIAPSEFIPIAEETGAIVLIGEWLLDEACRQ 897 Query: 934 AAKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILD----H 989 AA+ +S+++ LS LV + L +S L P L L I +LD + Sbjct: 898 AARWPER--VSVAVNLSPVQFKHRNLVGAVANALSSSHLDPARLQLEITETVLLDESEHN 955 Query: 990 AESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITII 1049 E +Q LR G +I + G L++ D + +D ++ ++ + Sbjct: 956 LELLQDLRRLGVKIAMDDFGTGYSSLGYLRSFPFDKIKVDQAFVRDLPHGRESLAIVKAV 1015 Query: 1050 QGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 G Q LGM T V + ++ G D + G + + P + Sbjct: 1016 AGLGQSLGMTTTVEGVETEDQLAIVNSEGFDEVQGYLFSRPLPAAEI 1062 Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats. Identities = 57/405 (14%), Positives = 150/405 (37%), Gaps = 7/405 (1%) Query: 282 IMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEE 341 + + + R + + SE H+R+ ++ + G+ L+ + G ++E Sbjct: 123 VTIVDITELRGIEETLRASEEHYRSLVDLHPQVPWIADRAGEVLEVGPRWSELTGLGEKE 182 Query: 342 LRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTD 401 G + + P+D + ++ E R G+ W + R D Sbjct: 183 TLGKGWAKAVHPQDAGALQDAWRRSLTN-GTPLDWEYRLLTMTGEYRWFRARAAAKRDAD 241 Query: 402 GTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFEL 461 + + +ED++E +R ++ R + + IW + + +++ E Sbjct: 242 EKIVRWYGLLEDVDERRRAADALRESEARFRAIADDAPVMIWVADPTGDTSFFNRLWLET 301 Query: 462 YEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIR-HIRALA 520 + W + + P+DRQ +++ + + P + E+R+ DG + + Sbjct: 302 TGQTEAEALGF-GWVDVIHPDDRQAVQEIFFKATAGKGPTRSEYRLRRADGSWAWVIDVG 360 Query: 521 NRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFM 580 + +G +G +D+T+ + A + + + DS + V +D+ + M Sbjct: 361 QPRFSADGTFLGYVGSVLDITDRRAGEIAQQEAQAFIRSIFDSSPDCVRVLDLEGRPLLM 420 Query: 581 NPVAEKMSGWTQEEAL-GVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSG 639 N ++ G ++ + G ++ + +E + + ++ + G Sbjct: 421 NEAGRRIFGLNEDAPITGQTWDSIGRASDAH---KVEAGWESVRHGKTARFEITVRDAGG 477 Query: 640 GSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASH 684 + P++ G + + +D+T+++ ++S + H Sbjct: 478 EERCMDVIAAPITDNLGKPSRILSIWRDITDAKLASDEISRAQKH 522 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 81/421 (19%), Positives = 154/421 (36%), Gaps = 18/421 (4%) Query: 298 SESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLN 357 S F+ M+ A + + +++ N+A C L + EL G T L P + Sbjct: 11 RRSYNLFQYLMDGVAEPVIVKDAGSRFVFINEAACFLLDKDRNELLGRTDHDLL-PTEQA 69 Query: 358 KDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDG--TPLYFIAQIEDIN 415 + +++++ + +E++ +G L V G + + I DI Sbjct: 70 DKIVALDRVVLSTGEGHEIEEQITTPDGTSRTLLTKKRPVSIPTGSTEEKFVVVTIVDIT 129 Query: 416 ELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVW 475 EL+ E+ + E + W + + R EL + + W Sbjct: 130 ELRGIEETLRASEEHYRSLVDLHPQVPWIADRAGEVLEVGPRWSELTGLGEKETLG-KGW 188 Query: 476 YECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITV-KDGIRHIRALANRVLNKEGEVERLL 534 + V P+D + R SL + +P E+R+ R RA A + + ++ R Sbjct: 189 AKAVHPQDAGALQDAWRRSLTNGTPLDWEYRLLTMTGEYRWFRARAAAKRDADEKIVRWY 248 Query: 535 GINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEE 594 G+ D+ E ++ +AL + + R D + D +F N + + +G T+ E Sbjct: 249 GLLEDVDERRRAADALRESEARFRAIADDAPVMIWVADPTGDTSFFNRLWLETTGQTEAE 308 Query: 595 ALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTL 654 ALG + V+H D + E + A + + L G V P + Sbjct: 309 ALGFGWVDVIHPD--DRQAVQEIFFKATAGKGPTRSEYRLRRADGSWAWVIDVGQPRFSA 366 Query: 655 DGSNIGSVLVIQDVTESR-----KMLRQLSYSASHDA------LTHLANRASFEKQLRIL 703 DG+ +G V + D+T+ R + Q + D+ + L R + Sbjct: 367 DGTFLGYVGSVLDITDRRAGEIAQQEAQAFIRSIFDSSPDCVRVLDLEGRPLLMNEAGRR 426 Query: 704 L 704 + Sbjct: 427 I 427 >UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q5P4W8_AZOSE Length = 1039 Score = 695 bits (1795), Expect = 0.0, Method: Composition-based stats. Identities = 164/826 (19%), Positives = 304/826 (36%), Gaps = 41/826 (4%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQF------LGYSQE 340 + + + + + E + M +V N+ + +F L + Sbjct: 219 ITLQKRAERELRDREMKLAALIASLPDLMFVVDQ-------NRCIAEFHAPDPGLLLTPP 271 Query: 341 E-LRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRH 399 E G + + P + K + +E+ IS +E G +VS + Sbjct: 272 ECFLGRPYARTLPPAVVVKLDEALEE-ISATGGAKQVEYTLDLPRGR-HHFSASVSRLAG 329 Query: 400 TDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWEL-KPNIFSWDKRM 458 + P FI + D+ E R EQ + R + + + I + + Sbjct: 330 SGLVPEGFIVLVRDLTERVRMEQALIESELRYRELFANSRVVMLVIDPVDGRIVEANAKA 389 Query: 459 FELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRA 518 E Y P ++ V R+ + + + + F+ R+ +R + Sbjct: 390 CEYYGYDPVSLTRMKIEDINVPG--REPLRFEMVQARKPDT-FRCCHRLAG-GQLRDVEV 445 Query: 519 LANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKIT 578 ++ + + + L I D+TE K+ E + Q + + + ++ D IT Sbjct: 446 ASSPI--EIAGRKLLYSIVRDVTERKRFEERMRQ----AMVVFKASSQGIMTTDAQGVIT 499 Query: 579 FMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRS 638 +NP ++G+ E +G + ++++ + +V Sbjct: 500 SVNPAFCTITGYLAAEVIGRKSSMFKPERHE--ATFFDAMWTSIVESGSWAGEVWSRRSD 557 Query: 639 GGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEK 698 G Y +IT + DG V + D+TE ++ + A+ D LT LANR+ + Sbjct: 558 GDRYPQWVTITAVRDTDGRIAEYVTLFSDITERKQQEVAMWRQANFDPLTGLANRSLLQD 617 Query: 699 QLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLA 758 +L L + L+F+DLD FK +NDS GH GD LL ++A + S +R D +A Sbjct: 618 RLDRALAHARRHGCKVGLLFLDLDGFKWINDSLGHDVGDELLVDVARRLNSCVRDEDTVA 677 Query: 759 RLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQ 817 RLGGDEF +++ D + IA ++++ + + F G H + S GIT+ D+ Sbjct: 678 RLGGDEFTVVVHDLADRADLGAIADKLVAVLRE-PFALRGARHHISGSVGITVFPDDGDD 736 Query: 818 AAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHG 877 ++ ADIA Y +K G+ R Y P A R + D + +++ + Sbjct: 737 VQTLLRNADIAMYKAKQAGKNRAQPYAPHMQADALARVHLEADLRM-AVEQRAFELHYQP 795 Query: 878 VASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAK 936 + + +L W E +I F + L + V E +Q Sbjct: 796 IVD--CASGALVGAEALIRWKHPERGMISPLEFIPVAEECGLIVPIGEWVLREVVRQRRD 853 Query: 937 AVA--SKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQ 994 +A + ++L +S A L + L L I ++ +E+V+ Sbjct: 854 WLARGHPPLRLTLNVSGVQFREAGLPELVRTLLAEFGTARSSLVFEITESVLMGGSENVE 913 Query: 995 K----LRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQ 1050 ++ G L G + LK D + +D + + D L+ I Sbjct: 914 ARMCDIKEQGICFALDDFGTGFSSLSYLKRFPVDIVKIDRSFVRDCPDDRNDATLVEAII 973 Query: 1051 GHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 A LG++ A V + L +G D + G +I D Sbjct: 974 NMAHSLGLRVTAEGVESAEQREFLRALGCDYLQGYLIGKPLAADAF 1019 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 78/479 (16%), Positives = 167/479 (34%), Gaps = 35/479 (7%) Query: 229 RLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMV-- 286 R P + ++FL M+ +++ L + + L LL+ AN M + Sbjct: 11 RRPLVVGIVVFLVAAMVSGVLVLGLGHPGDNLGLSLNAAVVLLFSLLLGGLANQMAQLRA 70 Query: 287 -------MYAFRAERKHISESE---------------THFRNAMEYSAIGMALVGTEGQW 324 + A R+ E+E A+E S + + G Sbjct: 71 HRADLQRLVAARSAEVRAREAELDRAQSVAHVGEQQLRKLSTAIECSPASIVITDRSGTI 130 Query: 325 LQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRN 384 N + GY+ +E+ G + L + + I+ + + E ++ Sbjct: 131 EYVNPQFERSTGYTAQEVVGKNPRILKSGNRSADEYAAMWATIT-HGHVWRGEFENVRKD 189 Query: 385 GDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWE 444 G W +++ +R DG F+A EDI KR E+ + ++ + ++ Sbjct: 190 GAHYWERASIAPIRADDGMISGFVAVKEDITLQKRAERELRDREMKLAALIASLPDLMFV 249 Query: 445 WELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLE 504 + I + L PP + + + P ++ + + + ++E Sbjct: 250 VDQNRCIAEFHAPDPGLLLTPPECFLG-RPYARTLPPAVVVKLDEALEEISATGGAKQVE 308 Query: 505 FRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSI 564 + + + G H A +R+ E + + D+TE ++ +AL + + R + Sbjct: 309 YTLDLPRGRHHFSASVSRLAGSGLVPEGFIVLVRDLTERVRMEQALIESELRYRELFANS 368 Query: 565 GEAVVCIDM-AMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADT 623 ++ ID +I N A + G+ + + + + I PL + A Sbjct: 369 RVVMLVIDPVDGRIVEANAKACEYYGYDP---VSLTRMKIEDINVPGREPLRFEMVQA-- 423 Query: 624 SRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSA 682 R G DV + +P+ + S +++DVTE ++ ++ + Sbjct: 424 -RKPDTFRCCHRLAGGQLRDVEVASSPIEIAGRKLLYS--IVRDVTERKRFEERMRQAM 479 Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 70/181 (38%), Gaps = 12/181 (6%) Query: 504 EFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDS 563 + R D R + A + V +E E++R + Q+ +L ++ Sbjct: 67 QLRAHRADLQRLVAARSAEVRAREAELDRAQSVAH----------VGEQQLRKLSTAIEC 116 Query: 564 IGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADT 623 ++V D + I ++NP E+ +G+T +E +G + + + +++ T Sbjct: 117 SPASIVITDRSGTIEYVNPQFERSTGYTAQEVVGKNPRILK--SGNRSADEYAAMWATIT 174 Query: 624 SRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSAS 683 + + G Y SI P+ DG G V V +D+T ++ R+L Sbjct: 175 HGHVWRGEFENVRKDGAHYWERASIAPIRADDGMISGFVAVKEDITLQKRAERELRDREM 234 Query: 684 H 684 Sbjct: 235 K 235 >UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVK9_METML Length = 1329 Score = 695 bits (1795), Expect = 0.0, Method: Composition-based stats. Identities = 138/712 (19%), Positives = 281/712 (39%), Gaps = 23/712 (3%) Query: 393 AVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELK-PNI 451 A++L++ + + + + ++ +RI I+ + I Sbjct: 618 AIALLQEMASDISFALDNFDREQKKQKLMSELDYANKRINQIVNLSPAVIYTLKPNAEGI 677 Query: 452 FSW---DKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRIT 508 F + ++++ W + + ED A + ++ S ++R Sbjct: 678 FHSDFISENIYQITGYAKDEWLKDNFWLDHIHTEDLAAALDSKKILFETGS-LNHQYRFM 736 Query: 509 V-KDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEA 567 G I + G+ ++G +D+T+ E L + +S + Sbjct: 737 HANGGYIWIEDQLTLTRDNNGKPLEIVGAWLDITDRLSAEEKLRLNAK----VFESSRDG 792 Query: 568 VVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSA 627 +V D KI +N ++G+ +E +G + ++ ++ + Sbjct: 793 IVITDKNNKIISVNNAFTTITGYEAKEVVGKNPHMLASEKLEES--FYSAMWDSIGVMGY 850 Query: 628 IEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDAL 687 + +V+ ++G Y SI+ + DG + +I D++E + ++ + ++ D L Sbjct: 851 WQGEVINQRKNGEIYTQWLSISTIKDADGKISQHIGIISDISERKVAEERIQFLSNFDPL 910 Query: 688 THLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLM 747 T+L N+ + ++ L T L+F+DLDRFK +N+S G + GD +++ELA Sbjct: 911 TNLPNKNLLNDRTKLALATAKRLKTAVTLMFVDLDRFKFINESLGPSIGDQVVKELAERF 970 Query: 748 LSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAG 807 ++ +R D + R GGDEF LLLP+ + E A +A +++ V F + G+ + AS G Sbjct: 971 VAYMRPEDTVCRQGGDEFILLLPNTDAEGAAHVAKKLLDIVAQ-PFNFHGQKIVLTASIG 1029 Query: 808 ITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIK 867 I+ + ++ AD A Y +K GR + Q + + + + I+ Sbjct: 1030 ISAYPQDGESFEQLAQSADAALYRAKYEGRNNFQFFARQMHEQAHDILLLESELR-SAIE 1088 Query: 868 ENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRV 926 + ++ + ++ + L +L W E ++ F + L + V Sbjct: 1089 HEEFLLYYQPQYDSK--TSKIIGLEALIRWQHPEKGLVSPAVFIPIAEESGLIAEIGDWV 1146 Query: 927 FHEFFQQAAKAVAS--KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAE 984 +Q A + + +++ LSV TL + + L ++ + P +L L + Sbjct: 1147 LRTAVKQLASWQEAGLGAVPVAVNLSVVQFHQDTLYGSVCQILRDTKVDPSMLELELTEG 1206 Query: 985 AILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNL 1040 ++ +E + +L G R+ + G + LK D L +D + + Sbjct: 1207 IAMEDSERTLNVLNQLNSLGVRLSIDDFGTGYSSLSYLKKFKIDKLKIDQSFVRGIGSHP 1266 Query: 1041 MDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQP 1092 D +IT I A+ L KTIA V ++ L D I G + P Sbjct: 1267 QDAAIITAIISMAKSLSFKTIAEGVETLEQLNFLIANSCDEIQGYYFSKPLP 1318 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 67/496 (13%), Positives = 162/496 (32%), Gaps = 86/496 (17%) Query: 255 SLLATPRTYLMSHMPWLPFLLILLPANI--MTMVMYAFRAERKHISESETHFRNAMEYSA 312 TP P L+ LL + + ++ + F + ++ES ++ + ++ Sbjct: 306 FFQTTPAFETRILPYGKPMLVALLGSTLTILSAFLAWFLLSSRQLAES--RYQKLFDQAS 363 Query: 313 IGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT------WPEDLNKDLQQVEKL 366 G+ ++ + Q++ N A LGY Q EL G+ + PE Sbjct: 364 DGVLVLDHQHQFIAANLAATNMLGYQQGELLGMRLPDVLINNVTKHPE--------FNTN 415 Query: 367 ISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQ 426 + +I T E +Y ++G A + + Y+ I D+ E K E Sbjct: 416 LISDIPTKD-EWQYRRKDGSRFIAEVNCRKLDKN-----YYFTIIRDLTERKLAENRILH 469 Query: 427 LMERITLANEAGGIGIWEWELKPN-----IFSWDKRMFELYEIPPHIKPNWQVWYECVLP 481 L + +E + + S + ++ + + + Q++ V Sbjct: 470 LTQLYQALSEVNQAIVRMGDDHELFPVVCRSSVNFGGMKMAWVGQLDEESQQIFPVAVHG 529 Query: 482 EDRQHAEKVI--------------RDSLQSRSPFKLEFRITVKDGIRH--------IRAL 519 + ++ + ++ +L++ + +T + R+ Sbjct: 530 DGIEYIDGLVISANADIPEGQGPTSTALRNNRMMIINDFLTSPNTTLWLDKAKYFGWRSS 589 Query: 520 ANRVLNKEGEVERLLGINMDMT-------------------------EVKQLNEALFQEK 554 A + ++ + +L + + T + +Q + L E Sbjct: 590 ACFPIQRDQKPFAVLNVYHESTNAFDSEAIALLQEMASDISFALDNFDREQKKQKLMSEL 649 Query: 555 ERLHITLDSI---GEAVVCI---DMAMKI--TFMNPVAEKMSGWTQEEALGVPLLTVLHI 606 + + ++ I AV+ + F++ +++G+ ++E L + HI Sbjct: 650 DYANKRINQIVNLSPAVIYTLKPNAEGIFHSDFISENIYQITGYAKDEWL-KDNFWLDHI 708 Query: 607 TFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQ 666 D +++ ++ +GG + +T +G + V Sbjct: 709 HTEDLAAALDS-KKILFETGSLNHQYRFMHANGGYIWIEDQLTLTRDNNGKPLEIVGAWL 767 Query: 667 DVTESRKMLRQLSYSA 682 D+T+ +L +A Sbjct: 768 DITDRLSAEEKLRLNA 783 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 50/274 (18%), Positives = 105/274 (38%), Gaps = 22/274 (8%) Query: 291 RAERKHISESETHFRN-----AMEYSAIGMALV--GTEG----QWLQTNKALCQFLGYSQ 339 R ++K SE + N + S + + EG ++ N + Q GY++ Sbjct: 638 REQKKQKLMSELDYANKRINQIVNLSPAVIYTLKPNAEGIFHSDFISEN--IYQITGYAK 695 Query: 340 EE-LRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVR 398 +E L+ + EDL L + L E + + + R+ + NG +W ++L R Sbjct: 696 DEWLKDNFWLDHIHTEDLAAALDSKKILF--ETGSLNHQYRFMHANGGYIWIEDQLTLTR 753 Query: 399 HTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRM 458 +G PL + DI + E+ + + E+ GI + I S + Sbjct: 754 DNNGKPLEIVGAWLDITDRLSAEEKLRLNAK----VFESSRDGIVITDKNNKIISVNNAF 809 Query: 459 FELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRA 518 + + + + + DS+ ++ E K+G + + Sbjct: 810 TTITGYEAKEVVGKNP-HMLASEKLEESFYSAMWDSIGVMGYWQGEVINQRKNGEIYTQW 868 Query: 519 LA-NRVLNKEGEVERLLGINMDMTEVKQLNEALF 551 L+ + + + +G++ + +GI D++E K E + Sbjct: 869 LSISTIKDADGKISQHIGIISDISERKVAEERIQ 902 Score = 80.7 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 52/144 (36%), Gaps = 1/144 (0%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 +R E E S G+ + + + N A GY +E+ G L Sbjct: 770 TDRLSAEEKLRLNAKVFESSRDGIVITDKNNKIISVNNAFTTITGYEAKEVVGKNPHMLA 829 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 + + I G + + E +NG++ L++S ++ DG I I Sbjct: 830 SEKLEESFYSAMWDSI-GVMGYWQGEVINQRKNGEIYTQWLSISTIKDADGKISQHIGII 888 Query: 412 EDINELKRTEQVNQQLMERITLAN 435 DI+E K E+ Q L L N Sbjct: 889 SDISERKVAEERIQFLSNFDPLTN 912 Score = 69.9 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 59/164 (35%), Gaps = 18/164 (10%) Query: 554 KERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGP 613 + R D + V+ +D + N A M G+ Q E LG+ L VL + Sbjct: 352 ESRYQKLFDQASDGVLVLDHQHQFIAANLAATNMLGYQQGELLGMRLPDVLINNVTKHPE 411 Query: 614 LMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRK 673 N+ S ++ + + G + + LD + +I+D+TE + Sbjct: 412 FNTNLISDIPTKDEWQ----YRRKDGSRFIAEVNC---RKLDKN--YYFTIIRDLTERKL 462 Query: 674 MLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALV 717 ++ + LT L + + + + + H+ +V Sbjct: 463 AENRILH------LTQLY--QALSE-VNQAIVRMGDDHELFPVV 497 >UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FU0_DECAR Length = 1006 Score = 694 bits (1791), Expect = 0.0, Method: Composition-based stats. Identities = 160/701 (22%), Positives = 283/701 (40%), Gaps = 20/701 (2%) Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI-P 465 + + Q ER+T A +G WE L + ++ ++E Sbjct: 308 VVGLYRSQRREQLVSQQLLLKEERLTAAQRIAQLGSWEIHLPSMHVTCSDELYRIFEFTK 367 Query: 466 PHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD-GIRHIRALANRVL 524 +Q + + PEDR +K + +S+ SR P L+ R+ + D ++++ Sbjct: 368 RETGYQYQDFLAKIHPEDRSVVDKTLHESIASRQPASLKHRLLMPDGRVKYVLESCETEY 427 Query: 525 NKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVA 584 ++G R++G + ++T + + + + L + GEA++ D+ KI +NP Sbjct: 428 GRDGTPLRVIGTSQEVTA----QQEMLAQMQLLASAVQYSGEAILITDVKNKILTVNPAF 483 Query: 585 EKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDV 644 +++G+T EEA+G + E +++ R + ++ + GG Y Sbjct: 484 TRLTGYTSEEAVGRDPSFL--SAGRTMPEEYERMWNGIAERGFWQGEIWDRRKDGGIYPK 541 Query: 645 HYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILL 704 SI+ + DG V DV+ R +L + A HD LT L NR S + +L L Sbjct: 542 WMSISVIRGEDGMIRYHVAHFTDVSSERAAEERLHHMAHHDVLTGLLNRLSLKGRLDQAL 601 Query: 705 QTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDE 764 R A++F+DLDRFK +ND+ GH GD LL E+A+ + +R SDV+AR+GGDE Sbjct: 602 AAARRDGSRVAVLFVDLDRFKVINDTLGHHVGDELLIEVANRLRDGVRDSDVVARVGGDE 661 Query: 765 FGLLLPDCNVESARF-IATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMS 823 F ++L SA +A +++ +V + G S GI + + +M Sbjct: 662 FVIMLSGVEHTSAVAMVAEKLVFSVGQ-SYQIGGYDLYSTPSIGIAIYPTDGEDGDILMK 720 Query: 824 QADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRI 883 AD A Y +K GR ++ + A ER R + + + V + Sbjct: 721 NADAAMYHAKMAGRNNFQFFDAKMNEAALERLNTE-HALRRALANQEFCLYYQPVID--L 777 Query: 884 PEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAA--KAVAS 940 R L +L W E ++ F + L L V +Q A A Sbjct: 778 ASNRVASLEALIRWNHPEKGLLLPGKFIGIAEETGLIQPLGEWVLWAACRQLADFAAAGI 837 Query: 941 KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKL 996 GI + + +S + + L +E + PR L I ++ + L Sbjct: 838 SGIKMGVNISAIQMRNGNLPLLARGVIEAYDIDPRNLIFEITESVAMEQPTETVRILDLL 897 Query: 997 RLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRL 1056 G + + G + L+ ++L LD + + ++ G A L Sbjct: 898 NAMGVSVAIDDFGTGYSSLSYLRMFPINHLKLDRSFVEQIGEEIDGCVICDATIGLAHSL 957 Query: 1057 GMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 +K +A V +D L G D++ G + + P D ++ Sbjct: 958 ELKVVAEGVETQAQLDYLRSRGCDMVQGFLFSRPVPADEVL 998 Score = 77.2 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 57/152 (37%), Gaps = 9/152 (5%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 ++ + +A++YS + + + + L N A + GY+ EE G Sbjct: 439 TSQEVTAQQEMLAQMQLLASAVQYSGEAILITDVKNKILTVNPAFTRLTGYTSEEAVGRD 498 Query: 347 FQQL----TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDG 402 L T PE+ + + E + E ++G + +++S++R DG Sbjct: 499 PSFLSAGRTMPEEYERMWNGIA-----ERGFWQGEIWDRRKDGGIYPKWMSISVIRGEDG 553 Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLA 434 Y +A D++ + E+ + L Sbjct: 554 MIRYHVAHFTDVSSERAAEERLHHMAHHDVLT 585 Score = 73.8 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 43/292 (14%), Positives = 102/292 (34%), Gaps = 19/292 (6%) Query: 274 LLILLPANIMTMVMYAFRAE--RKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKAL 331 + + L A ++ + R + + + E A + +G + + + L Sbjct: 300 MFVCLIAVVVGLYRSQRREQLVSQQLLLKEERLTAAQRIAQLGSWEIHLPSMHVTCSDEL 359 Query: 332 CQFLGYSQEELRGLTFQQL---TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVV 388 + +++ E G +Q PED + + + + I+ S++ R +G V Sbjct: 360 YRIFEFTKRE-TGYQYQDFLAKIHPEDRSVVDKTLHESIASRQPA-SLKHRLLMPDGRVK 417 Query: 389 WALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELK 448 + L + DGTPL I +++ + Q L + G I ++K Sbjct: 418 YVLESCETEYGRDGTPLRVIGTSQEVTAQQEMLAQMQLLASAVQY----SGEAILITDVK 473 Query: 449 PNIFSWDKRMFELYEIPPHIKPNWQ---VWYECVLPEDRQHAEKVIRDSLQSRSPFKLEF 505 I + + L + +PE+ + + + + R ++ E Sbjct: 474 NKILTVNPAFTRLTGYTSEEAVGRDPSFLSAGRTMPEEYER----MWNGIAERGFWQGEI 529 Query: 506 RITVKDGIRHIRALA-NRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKER 556 KDG + + ++ + + ++G + + D++ + E L Sbjct: 530 WDRRKDGGIYPKWMSISVIRGEDGMIRYHVAHFTDVSSERAAEERLHHMAHH 581 >UniRef50_B1Y6A9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y6A9_LEPCP Length = 898 Score = 693 bits (1790), Expect = 0.0, Method: Composition-based stats. Identities = 194/854 (22%), Positives = 336/854 (39%), Gaps = 51/854 (5%) Query: 286 VMYAFRAERKHISESETH------FRNAMEYSAIGMAL-VGTEGQWLQTNKALCQFLGYS 338 + +R + ++ F + + G+ + + +G+ Q N+ L Sbjct: 54 MFVQLERQRNALRDAHGREQALSAFAQRVMDTVGGVVIALDPQGRLRQRNRHCQNDLAPL 113 Query: 339 QEELRGLTFQQLTWPEDLNKDLQQVEKL----------ISGEINTYSMEKRYYNRNGDVV 388 E G + L P+DL + L Y E ++ R+G Sbjct: 114 PE---GSSVDLLLHPQDLAALEAALPHLPWQVHSVLFETVRRQGGYRAEHQFAMRDGSYR 170 Query: 389 WALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELK 448 + L+ +++ + DI+ELKR EQ + R A +G W+ Sbjct: 171 YHLVEAAMLYSAQNKEEGAVLSGTDISELKRQEQHLRASDARFNQAEHVARVGSWDLVPH 230 Query: 449 PNIFSWDKRMFELYEIPPHIKPNWQV----------WYECVLPEDRQHAEKVIRDSLQSR 498 +W M +++I + + V P++R + Sbjct: 231 TGAMTWSVEMARIFDITAQPHASHDAAGASVYSQADFLAAVHPDERARVVAAQAAASAEH 290 Query: 499 SPFKLEFRITVKD-GIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERL 557 P +EFRI ++ + + +G R +G D+TE +Q + + Sbjct: 291 RPCDIEFRIVTSGGKMKWVHLRSTTFHGDDGRPLRSVGTVQDITERRQAEDEM----RLA 346 Query: 558 HITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMEN 617 D+ A++ D +I +N ++G+T EEA+G L + + Sbjct: 347 ASVFDNSLNAILIADANGRIRKVNRAFTAITGYTAEEAVGDTPR--LMKSGLHSPGFYGE 404 Query: 618 IYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQ 677 +++ + + +++ C+ G V SI + G+ + + D+TE + ++ Sbjct: 405 MWAELQACGKWDGELMNQCKDGRIISVRESIAAVHDPAGAVAYYIGIFHDITEQKASAQR 464 Query: 678 LSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGD 737 + A +D LT L NRA + + L +R A++F+DLDRFK +NDS GH GD Sbjct: 465 IHQLAYYDVLTGLPNRALLMDRCQHELARAMRDGKRLAVLFLDLDRFKHINDSLGHPVGD 524 Query: 738 ALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFI-ATRIISAVNDYHFIWE 796 LLR +A + LR SD +ARLGGDEF +LL + + A RI+ A D F E Sbjct: 525 GLLRAVAQRLQGTLRDSDTIARLGGDEFIVLLEHVETSAGVELAARRILDAFRD-PFQLE 583 Query: 797 GRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAA 856 VGAS GI+L D+ + AD+A Y +K GRG +EP+ A +R Sbjct: 584 EHRLSVGASVGISLFPDHASDITSLFKYADLALYQAKAAGRGDFRFFEPRFNDAAKDRMR 643 Query: 857 MSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEG-EIIDEQTFRRSFSD 915 + + + + ++ NQL + V + +P+ R +L W+ + TF D Sbjct: 644 LERELR-QALERNQLSLQYQPVFA--LPDGRLAGAEALLRWTHPALGSVSPATFIPIAED 700 Query: 916 PALSHALDRRVFHEFFQQAAKAVASKGIS--ISLPLSVAGLSSATLVNDLLEQLENSPLP 973 L + V + +QA + + + I++ LS + LV+ + L + LP Sbjct: 701 SGLIVPIGAWVLEQACRQARQWLDAGLDPGVIAVNLSGMQIQRNDLVDTVSSVLARTGLP 760 Query: 974 PRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLD 1029 L L I I HAE + +LR G + + G L+ L +D Sbjct: 761 ACHLELEISESYITRHAESDLQRLGQLRALGVSMAIDDFGTGQTSLGHLRRLPVSKLKID 820 Query: 1030 GELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIAD 1089 A+++ + + I G LG+ +A V L DL+ G A Sbjct: 821 RSFMADIEHDAAAAAVTRAIIGLGHGLGLTVVAEGVESAAQESALVAQHCDLVQGFRYAR 880 Query: 1090 AQPLDLLVNSSYFA 1103 PLD V ++ A Sbjct: 881 --PLDAPVFAALCA 892 >UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1G1_PELCD Length = 1061 Score = 693 bits (1789), Expect = 0.0, Method: Composition-based stats. Identities = 192/932 (20%), Positives = 348/932 (37%), Gaps = 83/932 (8%) Query: 232 RMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFR 291 ++ F + + +M+ +++ + + + H LP LLI A M + R Sbjct: 135 QLYGFGVLVHLIMLAFMLLLPWQT------AFRVLHHISLPVLLIYPLATAMLGSLMLKR 188 Query: 292 AER----KHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT- 346 R K + SE R A++ S G+ + + + N LGY + R Sbjct: 189 QRRDQISKALQTSEERLRMALKASKQGLYDLNVQSGNMIVNAEYALILGYDPQNFRETNG 248 Query: 347 -FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLV-RHTDGTP 404 + PED + L ++G+ + E R R G W L +V R T G P Sbjct: 249 DWIARMHPEDRSAVLAVYRNYLAGKTEEFRAEFRQRTRCGQWKWVLSMGKIVERDTHGQP 308 Query: 405 LYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIG----------------------- 441 L + DI E +++E+ ++ E Sbjct: 309 LRMLGTFSDITERRQSEEQTRKAEREKADLLEEAQQARLTLQRLFEEQTLASAEIERTSR 368 Query: 442 -------------IWEWELKPNIFSWDKRMFELYEIPPHIKPNWQ---VWYECV------ 479 I + + I +++ ++ + V++ Sbjct: 369 LLAEVLNAASEVSIIATDPRGIITVFNRGAEKMLGYSAEEMVGRETPTVFHLASELQTRY 428 Query: 480 --LPEDRQHAEKVIRDSLQSRSPFKLEFRITV----KDGIRHIRALANRVLNKEGEVERL 533 L DR K D + + E R + + + + + + Sbjct: 429 TELGADRGTPIKDFADYMAHATTADAEHREWTYTSKQGEHISVSLVITAMRSPAHGIVGY 488 Query: 534 LGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQE 593 LGI D+TE K+ L +L ++ AV+ D I + NP +++G++ Sbjct: 489 LGIAQDITERKRQENTL----RKLSQVVEQSPTAVILTDPQGNIEYANPKFTQITGYSLT 544 Query: 594 EALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLST 653 E G + + + ++++ T+ + + G + H SI+P+ Sbjct: 545 EVHGKNPRLLK--SGETSAEEYRDLWTTITAGREWHGEFHNKRKDGSLFWEHASISPVRN 602 Query: 654 LDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQR 713 G + + +D+T+ ++ QL + A+HD LT LANRA + +L + + + Sbjct: 603 DAGDISHFLAIKEDITDRKRYEEQLQHLATHDNLTGLANRALLQDRLEQSILFAKRSGRL 662 Query: 714 HALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC- 772 A + +DLDRFK +NDS GH+ GD LL+ A + +R +D +ARLGGDEF +LL + Sbjct: 663 VAALLLDLDRFKIINDSLGHSFGDRLLQIAADRLRESVRGADTVARLGGDEFVILLAEVA 722 Query: 773 NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYAS 832 N E +A +I+ + F R V AS GI++ + ++ ADIA Y + Sbjct: 723 NEEDVGKVAKKILDRITA-PFQIADREITVTASLGISIYPQDGEDEETLIRNADIAMYQA 781 Query: 833 KNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLI 892 K G +Y P+ E M D + R + +L++ + + Sbjct: 782 KEEG-NAFRLYAPEMNIVVHEAMEMETDLR-RALDRGELLLHYQPKID--LDSGKITGAE 837 Query: 893 SLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA--VASKGISISLPL 949 +L W +I F + L + V Q + I+ L Sbjct: 838 ALVRWQHPVRGMIAPGMFIPLAEETGLILPIGEWVLENICLQIKSWQTQGFPLVPIAANL 897 Query: 950 SVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH----AESVQKLRLAGCRIVL 1005 S + L+ + L+++ LPP LL L + I+ + AE++Q+L G + L Sbjct: 898 SARQFRNDELIATIQRILQDTGLPPHLLELELTESMIMRNVQTAAETMQELNALGVSLAL 957 Query: 1006 SQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPV 1065 G N L+ D L +D ++V + + T I A LG++ +A V Sbjct: 958 DDFGTGYSSLNYLRRFPVDCLKIDRSFISDVADDPSAAAVATSIIAIAHSLGLQAVAEGV 1017 Query: 1066 VLPLVMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 ++ L D G + + ++ Sbjct: 1018 ETEEQLEFLRQCACDSYQGYLYSAPLAVEEFT 1049 >UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxalobacteraceae RepID=A6T0F0_JANMA Length = 699 Score = 693 bits (1788), Expect = 0.0, Method: Composition-based stats. Identities = 149/651 (22%), Positives = 267/651 (41%), Gaps = 15/651 (2%) Query: 453 SWDKRMFELYEIPPHIKP-NWQVWYECV-LPEDRQHAEKVIRDSLQSRSPFKLEFRITVK 510 + F L N +V Y+ + P+DR+H I +++++ F +E+RI Sbjct: 43 FVSEGCFALTGYTEEDLLFNSRVSYDQITHPDDRRHVRDTILEAVRNNRRFDIEYRIVRA 102 Query: 511 D-GIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVV 569 D IRH+ + + + L G D+TE KQ +EAL + + R ++ E + Sbjct: 103 DGSIRHVWERGTNISHDNKAWDILEGFIQDVTERKQADEALREAERRYRSIFENAIEGIY 162 Query: 570 CIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIE 629 + +NP +M G+ +AL L + + + D +E Sbjct: 163 QSTPSDGYLAVNPALARMYGYDSPQALISTLRDIDNQVYVDPQRRLEFKRLMAKHGVVTN 222 Query: 630 QDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTH 689 + +H R+G + + + DG+ + ++ +TE + ++ + A+HDALT Sbjct: 223 FESRVHRRNGEVIWISENARSVYNSDGTLLFFEGTVEAITERKLHEAEIQFQATHDALTG 282 Query: 690 LANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLS 749 L NR +++ + + A+ F+DLD+FK +NDS GH GD LL+ A + S Sbjct: 283 LPNRTLLYDRMQQAVLHSERYGKLTAIAFLDLDQFKFINDSLGHQVGDELLKITAQRLTS 342 Query: 750 MLRSSDVLARLGGDEFGLLLPDCNVESAR-FIATRIISAVNDYHFIWEGRVHRVGASAGI 808 LR SD +AR GGDEF LLL D E A R++ V+ + ++ S G+ Sbjct: 343 CLRESDTVARQGGDEFVLLLTDQPNEEAITHTMQRVLHEVSQ-PWKANDLEFQITCSIGL 401 Query: 809 TLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKE 868 TL D+ A ++ AD A Y +K GR + + ++ ++R + L+ + I Sbjct: 402 TLCPDDGRDAETLLKNADSAMYKAKELGRNNFQYFSAEMNSSVTDRLEL-LNRLRQAITN 460 Query: 869 NQLMMLAHGVASPRIPEARNLWLISLKLWSCEG-EIIDEQTFRRSFSDPALSHALDRRVF 927 ++ S + + + +L W+ ++ +F + L L V Sbjct: 461 EDFVLHYQPKVS--LASHQIIGAEALVRWNSAHSGMVSPASFIPLAEETGLIIPLGEWVL 518 Query: 928 HEFFQQ--AAKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEA 985 +Q A + I IS+ LS L+ +V + L + L + L L I Sbjct: 519 RTACRQNRAWQDAGYPPIPISVNLSPRQLARGDIVEVVERILTETGLEAQHLELEITESV 578 Query: 986 ILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLM 1041 + E + +LR G +I L G + LK D L +D ++ + Sbjct: 579 MTTDVEKSFALLTQLRSLGVKISLDDFGTGYSSLSYLKRFPVDTLKIDQSFVRDIATDQD 638 Query: 1042 DEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQP 1092 ++ I + L + +A + L G D G +++ P Sbjct: 639 SAAIVKAIISLGRNLNLTVLAEGIETEDQFQFLLANGCDEGQGYLMSKPVP 689 Score = 113 bits (283), Expect = 5e-23, Method: Composition-based stats. Identities = 53/382 (13%), Positives = 122/382 (31%), Gaps = 21/382 (5%) Query: 320 TEGQWL--QTNKALCQFLGYSQEELR---GLTFQQLTWPEDLNKDLQQVEKLISGEINTY 374 + W ++ GY++E+L +++ Q+T P+D + + + + Sbjct: 35 LDAHWTMEFVSEGCFALTGYTEEDLLFNSRVSYDQITHPDDRRHVRDTILEAVRNN-RRF 93 Query: 375 SMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLA 434 +E R +G + + + H + I+D+ E K+ ++ ++ R Sbjct: 94 DIEYRIVRADGSIRHVWERGTNISHDNKAWDILEGFIQDVTERKQADEALREAERRYRSI 153 Query: 435 NEAGGIGIWEWELKPNIFSWDKRMFELYEI--PPHIKPNWQVWYECVLPEDRQHAEKVIR 492 E GI++ + + + +Y P + + V D Q + R Sbjct: 154 FENAIEGIYQSTPSDGYLAVNPALARMYGYDSPQALISTLRDIDNQVY-VDPQRRLEFKR 212 Query: 493 DSLQSRSPFKLEFRI-TVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALF 551 + E R+ + I A V N +G + G +TE K + Sbjct: 213 LMAKHGVVTNFESRVHRRNGEVIWISENARSVYNSDGTLLFFEGTVEAITERKLHEAEI- 271 Query: 552 QEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDN 611 + + H L + + D + + K++ + L I Sbjct: 272 -QFQATHDALTGLPNRTLLYDRMQQAVLHSERYGKLTAIAF-----LDLDQFKFINDSLG 325 Query: 612 GPLMENIY--SADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVT 669 + + + +A S + + + + G + + + P + V+ +V+ Sbjct: 326 HQVGDELLKITAQRLTSCLRESDTVARQGGDEFVLLLTDQP--NEEAITHTMQRVLHEVS 383 Query: 670 ESRKMLRQLSYSASHDALTHLA 691 + K LT Sbjct: 384 QPWKANDLEFQITCSIGLTLCP 405 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 36/194 (18%), Positives = 75/194 (38%), Gaps = 3/194 (1%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + + + + E+E +R+ E + G+ +L N AL + GY + T Sbjct: 133 VTERKQADEALREAERRYRSIFENAIEGIYQSTPSDGYLAVNPALARMYGYDSPQALIST 192 Query: 347 FQQLTWPEDLNKDLQ-QVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPL 405 + + ++ + + ++L++ + E R + RNG+V+W V ++DGT L Sbjct: 193 LRDIDNQVYVDPQRRLEFKRLMAKHGVVTNFESRVHRRNGEVIWISENARSVYNSDGTLL 252 Query: 406 YFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIP 465 +F +E I E K E Q L +++ +R +L I Sbjct: 253 FFEGTVEAITERKLHEAEIQFQATHDALTGLPNRTLLYDRM--QQAVLHSERYGKLTAIA 310 Query: 466 PHIKPNWQVWYECV 479 ++ + + Sbjct: 311 FLDLDQFKFINDSL 324 >UniRef50_Q5P8Z7 Sensory box/GGDEF family protein n=3 Tax=cellular organisms RepID=Q5P8Z7_AZOSE Length = 1008 Score = 692 bits (1786), Expect = 0.0, Method: Composition-based stats. Identities = 180/828 (21%), Positives = 317/828 (38%), Gaps = 47/828 (5%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + + E ++ T + ++ G +VG + N AL + G G Sbjct: 168 VKTAQTEVAVLAAERTRLQGILDALPDGAYIVGADHVIEYFNPALERQFGAPA----GRK 223 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 + + + +G S++ + +G L R+ DGT Sbjct: 224 CFEYLHGRSEACTWCNNDAVFAGA----SLQAEWTAPSGRSY--DLFEMPFRNPDGTLSK 277 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP 466 F E+ ++ ++ A +G WEW+L + W ++ L P Sbjct: 278 F--------EIFHDITPVKESRRQLAEATLLAHVGYWEWQLPAGVLHWGEQTDRLLGHAP 329 Query: 467 H-IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVL 524 + P+ + V P+DR+ +++++ + EFR+ DG +R RA + Sbjct: 330 GKVTPSGATFLAHVHPDDRERVAGEFAGAVRNQCSYVSEFRLIRADGALRIARANGHLQY 389 Query: 525 NKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDM-AMKITFMNPV 583 ++EG R+ G D+TE++ AL +ER I + + AV + + +N Sbjct: 390 DREGRAVRVCGAIQDITELRATETALRNSEERFSIAMTAAPFAVAITRVEDGRFVEVNDK 449 Query: 584 AEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHC-RSGGSY 642 E GW +EE +G T + + + ++ L C R+G Sbjct: 450 YELHFGWKREELIGK---TSVETNLWPDPESRQRWLEMLRQHGSVLDFETLGCERNGAVR 506 Query: 643 DVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRI 702 V S + +DG + + D+T+ ++ ++ Y A HDALT L NR F + + Sbjct: 507 QVSLSSRYI-DIDGEK-HVLTFVHDITDRKEAQARIEYLAHHDALTGLPNRVLFRDRFAL 564 Query: 703 LLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGG 762 H + AL+F+DLD FK +ND+ GH GD LL+ +A + LR +D ++RLGG Sbjct: 565 ATAWAERAHAKVALLFVDLDHFKTINDTLGHPVGDGLLQGVALRLRECLRETDTVSRLGG 624 Query: 763 DEFGLLLPDCNVESARFIA-TRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEV 821 DEF + L D A A +I + F EG S GI + D+ + Sbjct: 625 DEFLIALTDIRDPQAINSATAKIFDTLTR-PFELEGHELTNTMSIGIAIWPDDGEDFDTL 683 Query: 822 MSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASP 881 + AD A Y +K GR Y Q A E+ + ++ ++ ++ + Sbjct: 684 LKNADTAMYQAKRAGRNTWRFYTEQMNANAVEQLQLRT-ALHSALENDEFLLHYQPQIN- 741 Query: 882 RIPEARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA--V 938 + + + +L W + E++ F + + L + V E QA + Sbjct: 742 -LASGHVVGVEALLRWHWDKRELVPPDRFIPAAEESGLIVPIGDWVLREACMQAVRWTRQ 800 Query: 939 ASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLII--------PAEAILDHA 990 ++I++ LS L ++ L S L P L L + I Sbjct: 801 GLPELTIAVNLSAVQFRRGDLERSVVRALSLSGLDPARLELELTESLLLVDTESVI---- 856 Query: 991 ESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQ 1050 E++++L+ G R+ + G LK D L +D ++ + D ++ I Sbjct: 857 ETLRRLKSLGVRLSIDDFGTGYSSLAYLKRFAVDKLKIDQSFVRDIATDPDDAAIVRAIV 916 Query: 1051 GHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 A L ++ IA V + L D G A P D L Sbjct: 917 SMAHTLKLQVIAEGVESEDIDRFLHIFNCDEAQGYHYARPMPGDALAE 964 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 61/200 (30%), Gaps = 19/200 (9%) Query: 483 DRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTE 542 D ++ + + E + R + G + ++ D+ Sbjct: 112 DASRFLADLQHVATTGEGREREVDVGG----RWYLERMLPFHGEGGVRDGVVLTYTDINR 167 Query: 543 VKQLNEAL---FQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVP 599 VK + E+ RL LD++ + + I + NP E+ G G Sbjct: 168 VKTAQTEVAVLAAERTRLQGILDALPDGAYIVGADHVIEYFNPALERQFGAPA----GRK 223 Query: 600 LLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNI 659 LH + D + SG SYD+ P DG+ Sbjct: 224 CFEYLHGRSE-----ACTWCNNDAVFAGASLQAEWTAPSGRSYDLFE--MPFRNPDGTLS 276 Query: 660 GSVLVIQDVTESRKMLRQLS 679 + D+T ++ RQL+ Sbjct: 277 KF-EIFHDITPVKESRRQLA 295 >UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=3 Tax=Polaromonas RepID=Q12GF0_POLSJ Length = 989 Score = 689 bits (1778), Expect = 0.0, Method: Composition-based stats. Identities = 179/832 (21%), Positives = 329/832 (39%), Gaps = 46/832 (5%) Query: 288 YAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLG------YSQEE 341 + R + SE AM + +G + L + LG + EE Sbjct: 172 EREQQSRMRLQHSENRLHIAMRTAQMGNWSLNLADDSLTLSSEFPAILGTSAAMPQTLEE 231 Query: 342 LRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTD 401 L L + + L+ V + + + E + W + +VR Sbjct: 232 LL------LHYAAESRGRLRHVISECARKGTPFDEEAQMLTAQDGRRWVRIIGEVVRDGQ 285 Query: 402 GTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFEL 461 G ++DIN K+ ++ +L R+T + + + ++ L Sbjct: 286 GAITRIQGALQDINARKQAQEETLRLAMRLTTTLASITEAFVTLDREGRFTYLNQESERL 345 Query: 462 YEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALAN 521 + ++W + E + I+ +L + + E+ + + A Sbjct: 346 LQRSTAELLGQEIWQDFG-EEVSGRLRQHIQRALATNRQVEFEY--FDAPLGKWLEVRAY 402 Query: 522 RVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAM---KIT 578 E L D++E + E L E L+ I V +I Sbjct: 403 PF------AEGLAVYFRDVSERRNSQEQLMLL-ETGIARLNDIVVIVEASPHHGSGPQIV 455 Query: 579 FMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRS 638 F+N E+ +G+T++E L + + + I+SA ++V++ + Sbjct: 456 FVNDAFERHTGYTRDEVLSRMPGMLQGPGTRQDE--LARIFSALQQWKQARGELVIYRKD 513 Query: 639 GGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEK 698 GGS+ V I ++ +G V V +D+T+ + ++ + A +D LT L NR Sbjct: 514 GGSFWVDLEIVSVAAQNGDLTHWVAVGRDITQRKAADEKIHHLAFYDPLTELPNRQLLLD 573 Query: 699 QLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLA 758 +L L T Q L+FIDLD FK +ND+ GH+ GD LL+++A + +R D +A Sbjct: 574 RLEQALADCTITRQEGVLMFIDLDNFKILNDTVGHSKGDLLLQKVAVRLKGCVRKLDTVA 633 Query: 759 RLGGDEFGLLLPDCNVE------SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLID 812 RLGGDEF ++L D + A+ +A ++++ + + + G H +S G+T + Sbjct: 634 RLGGDEFVVMLQDLGTQPEAATRKAQIVAEKVLATLRE-PYDLAGYQHYSTSSIGVTPFN 692 Query: 813 DNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLM 872 +E++ QAD+A Y +K GR V ++P A+ S AA+S D + ++E+Q + Sbjct: 693 ARQGSVSELLKQADLAMYQAKTMGRNTVCFFDPDMQASVSANAALSTDLR-AGLREHQFL 751 Query: 873 MLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFF 931 + E R + +L W + ++ F + L L + V + Sbjct: 752 VHYQPQVD---REQRITGVEALLRWKHPQRGMVSPAEFIPVAEETGLILPLGQWVLEQAC 808 Query: 932 QQAA---KAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILD 988 Q A K + G+SI++ +SV V+ ++ ++++ + P L L + + D Sbjct: 809 LQLAVWQKRPETAGLSIAVNVSVRQFRHPDFVDMVMAAIKHTGIQPHNLKLELTESLLAD 868 Query: 989 HAE----SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEM 1044 E + L+ G + L G + LK D L +D A+V + D Sbjct: 869 RMEIAIAKMGTLKALGVTLALDDFGMGYSSLSYLKRLPLDQLKIDKSFIADVFSDPNDAA 928 Query: 1045 LITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 + + I AQ LG+ IA V L+G+G G + P+ Sbjct: 929 ICSAIISLAQSLGLDVIAEGVETEAQRSFLAGLGCGYYQGFLFCPPLPIAEF 980 Score = 64.1 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 61/389 (15%), Positives = 122/389 (31%), Gaps = 34/389 (8%) Query: 178 KPHYLLRHRNPRLLFESLLTLAITLTLSWLSML--YLPWPFTFIIVLLMWSAVRLPRMEA 235 + H +R +L ++TL+ + ++L P T +LL ++A R+ Sbjct: 187 RLHIAMRTAQMGNWSLNLADDSLTLSSEFPAILGTSAAMPQTLEELLLHYAAESRGRLRH 246 Query: 236 FLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFL--LILLPANIMTMVMYAFRAE 293 + P W+ + ++ +T + A + Sbjct: 247 VISECAR--------KGTPFDEEAQMLTAQDGRRWVRIIGEVVRDGQGAITRIQGALQDI 298 Query: 294 RKHISESETHFRNAMEYSA------IGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTF 347 E R AM + + EG++ N+ + L S EL G Sbjct: 299 NARKQAQEETLRLAMRLTTTLASITEAFVTLDREGRFTYLNQESERLLQRSTAELLGQEI 358 Query: 348 QQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYF 407 Q E + Q +++ ++ +E Y++ W + +G +YF Sbjct: 359 WQDFGEEVSGRLRQHIQRALA---TNRQVEFEYFDA-PLGKWLEVRAYPF--AEGLAVYF 412 Query: 408 IAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPN--IFSWDKRMFELYEIP 465 D++E + +++ L I N+ I I + Sbjct: 413 ----RDVSERRNSQEQLMLLETGIARLNDIVVIVEASPHHGSGPQIVFVNDAFERHTGYT 468 Query: 466 -PHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD-GIRHIRALANRV 523 + + P RQ I +LQ + E I KD G + V Sbjct: 469 RDEVLSRMPGMLQG--PGTRQDELARIFSALQQWKQARGELVIYRKDGGSFWVDLEIVSV 526 Query: 524 LNKEGEVERLLGINMDMTEVKQLNEALFQ 552 + G++ + + D+T+ K +E + Sbjct: 527 AAQNGDLTHWVAVGRDITQRKAADEKIHH 555 >UniRef50_Q8DIH6 Tlr1612 protein n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DIH6_THEEB Length = 1292 Score = 688 bits (1777), Expect = 0.0, Method: Composition-based stats. Identities = 185/898 (20%), Positives = 339/898 (37%), Gaps = 33/898 (3%) Query: 227 AVRLPRMEAFLIFLTTVMMVSL---MMAADPSLLATPRTYLMSHMPWLPFLLILLPANIM 283 A+ A+L+ V + P RT + L + + + Sbjct: 396 AIAPAFPGAWLLIPLIVADRVWGSLTLFNYPEPHEWSRTEIDLARAVATQLEVAIYQATL 455 Query: 284 TMVMYAFRAERKH----ISESETHFRNAMEYSAIGMA--LVGTEGQ--WLQTNKALCQFL 335 AER+ + +SE FR + + +G+ N + Sbjct: 456 YQQAQQELAERRRIEATLRQSEECFRLTATNVPGAIFRYIQYPDGRNRVFYLNPMCERLW 515 Query: 336 GYSQEELR--GLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLA 393 G E G QL PED Q V + ++ + + G++ W A Sbjct: 516 GVPAEAAAEDGEHLWQLVHPEDREATWQSVLRSAETLTPWFAQWRIIHPTTGEIRWLEGA 575 Query: 394 VSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFS 453 R DG ++ + D+ + E ++ ++ LA IG + +L F Sbjct: 576 GQPTRDADGAVVWHTVIL-DVTDRHLAEARLKEQQAQLELAARVSNIGFYFCDLHTGTFY 634 Query: 454 WDKRMFELYEIPPHIKP-NWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITV-KD 511 P + N + W E + PEDR A R L+ + + ++ R+ Sbjct: 635 VSPSYKAQLGYPATTQEVNLEDWEERLHPEDRDRALAAYRQFLRGEAHYSIDLRLRHCNG 694 Query: 512 GIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCI 571 R + A + +++G+ +++G N+D+TE K AL + +ER + ++ + + + Sbjct: 695 TYRWFHSEAVLIHDEQGQPSKVVGTNVDITERKATELALRESEERYRLLAENTSDIICLL 754 Query: 572 DMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQD 631 D +++P E + GW E +G + H + + + + R Sbjct: 755 DCQGSCLYVSPSYETLLGWPTETLIGEHFTQLCHP--EERSRVKQELQQMIEQRQFWPIT 812 Query: 632 VVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLA 691 + G + + P G +DVT ++ QL + A HD+LT L Sbjct: 813 YQVCTARGDVLWLETLVKPRYDSQGHVQQLQTTSRDVTSRVQVQMQLHHDAYHDSLTGLP 872 Query: 692 NRASFEKQLRILLQTVNSTHQRH-ALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSM 750 NR F +QL + + Q H A++F DLDRFK +NDS GH GD +L A+ + + Sbjct: 873 NRLYFMEQLAAAISQAQTNPQFHYAVLFFDLDRFKVINDSLGHGVGDQVLIAFATWLRRL 932 Query: 751 LRSSDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGIT 809 + + +AR GGDEF +LL + + A + +I ++ R + S G+ Sbjct: 933 VGNQYTVARFGGDEFVILLTHVPHPQRAIALCEELIHSLQQ-PLRVGERQIFLSTSIGVV 991 Query: 810 LIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKEN 869 + V+ AD A YA+K R V++ Q ER + D + + + + Sbjct: 992 FAQNEYETGMAVLRDADTAMYAAKRQSGRRYAVFDTQMYEQVLERLHLEHDLR-QALNQG 1050 Query: 870 QLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFH 928 L +L V + R + + +L W E ++ F D L ALD+ Sbjct: 1051 GLQLLYQPVV--HLQSQRLVGMEALVRWQHPERGLVSPAHFIPIAEDTGLIVALDQWALA 1108 Query: 929 EFFQQAAKAVA----SKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAE 984 + Q + + +S+ +S L T + L + PLP L L + Sbjct: 1109 QACWQLWTWRQQYSTAANLVLSVNVSAKTLQDPTFLQHLDTIRQRYPLPKGQLLLELTER 1168 Query: 985 AILDHAESV----QKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNL 1040 ++ + + LR I + G + L + +L +D + ++ N Sbjct: 1169 IGIELGSEMLSLLESLRHRHVEISIDDFGTGYSCLSYLHSLPIQHLKVDRSFVSQLEENE 1228 Query: 1041 MDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 + +I +I +++LG + IA + P + L +G D G + A P + + Sbjct: 1229 RNLQIIRMILLLSKQLGYRVIAEGIETPKQLQILQELGCDEGQGYLFARPLPPETFAS 1286 Score = 86.1 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 42/272 (15%), Positives = 86/272 (31%), Gaps = 16/272 (5%) Query: 425 QQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYEC---VLP 481 L + +G+ +++ I + L + Q+ + Sbjct: 33 YDLEHYLAAVLSVLPVGVALYDVTGEIVYMNPAGRALLGVEDPATTASQICADLRIFYCG 92 Query: 482 EDRQHAEKVI--RDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMD 539 DR + + + +LQ + +E + D + A+ +LN G+VE + + Sbjct: 93 SDRPYPKDELPGIQALQGLTVPPMELEVQYGDRQLTVEVQASPILNPAGQVEFSISTFWE 152 Query: 540 MTEVKQLNEALFQEKERLHIT-------LDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQ 592 +T K+ K L S + V+C ITF N + Sbjct: 153 ITARKRSELEQQILKNYWQAQANRYYEILQSQSDLVLCSRADTTITFANDAFCQFFSRPA 212 Query: 593 EEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLS 652 +G P + D PL+E + + ++ G + T + Sbjct: 213 SVVIGCPWSEFV--LAEDLPPLLEKVAQLRPDAPTFVNENRVYHPQYGLRWTQWMNTAIF 270 Query: 653 TLDGSNIGSVLVIQDVTESRKMLRQLSYSASH 684 +G+ V +D+T + + L A + Sbjct: 271 DAEGNLREIQSVGRDITALK--EQLLREQALN 300 Score = 80.3 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 65/447 (14%), Positives = 136/447 (30%), Gaps = 60/447 (13%) Query: 298 SESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLN 357 + ++ + + + N A CQF + G + + EDL Sbjct: 171 QAQANRYYEILQSQSDLVLCSRADTTITFANDAFCQFFSRPASVVIGCPWSEFVLAEDLP 230 Query: 358 KDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDI--- 414 L++V +L + T+ E R Y+ + W + + +G + DI Sbjct: 231 PLLEKVAQL-RPDAPTFVNENRVYHPQYGLRWTQWMNTAIFDAEGNLREIQSVGRDITAL 289 Query: 415 -NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMF-------------- 459 +L R + +N + + A E+ D + Sbjct: 290 KEQLLREQALNHVIQAIRNSLDLATIFETAVREIAQVGLGVDAAVVQYLPEQGVWRHIAE 349 Query: 460 ----------ELYEIPPHIKPNWQVWYE---CVLPEDRQH---AEKVIRDSLQS---RSP 500 E EIP P ++ + R+ + I + P Sbjct: 350 YHHDPHFPCGEGLEIPDRDNPFAADLKAGNIVIIADSREITDPVNQAIAPAFPGAWLLIP 409 Query: 501 FKLEFRITV-------KDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQE 553 + R+ + R + ++E + + +Q + Sbjct: 410 LIVADRVWGSLTLFNYPEPHEWSRTEIDLARAVATQLEVAIYQATLYQQAQQELAERRRI 469 Query: 554 KERLHITLD-------SIGEAVV--CIDMAMK--ITFMNPVAEKMSGWTQEEAL--GVPL 600 + L + + ++ A+ + + ++NP+ E++ G E A G L Sbjct: 470 EATLRQSEECFRLTATNVPGAIFRYIQYPDGRNRVFYLNPMCERLWGVPAEAAAEDGEHL 529 Query: 601 LTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIG 660 ++H + + SA+T Q ++H +G + + P DG+ + Sbjct: 530 WQLVHPEDRE-ATWQSVLRSAETLTPWFAQWRIIHPTTGEIRWLEGAGQPTRDADGAVV- 587 Query: 661 SVLVIQDVTESRKMLRQLSYSASHDAL 687 VI DVT+ +L + L Sbjct: 588 WHTVILDVTDRHLAEARLKEQQAQLEL 614 Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 45/280 (16%), Positives = 93/280 (33%), Gaps = 22/280 (7%) Query: 301 ETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGY----SQEELRGLTFQQLTWPEDL 356 E + + +G+AL G+ + N A LG + + D Sbjct: 36 EHYLAAVLSVLPVGVALYDVTGEIVYMNPAGRALLGVEDPATTASQICADLRIFYCGSDR 95 Query: 357 NKDLQQV--EKLISGEI-NTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIED 413 ++ + + G +E +Y +R + + S + + G + I+ + Sbjct: 96 PYPKDELPGIQALQGLTVPPMELEVQYGDRQ---LTVEVQASPILNPAGQVEFSISTFWE 152 Query: 414 INELKRTEQVNQQL-------MERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP 466 I KR+E Q L R ++ + I + + + P Sbjct: 153 ITARKRSELEQQILKNYWQAQANRYYEILQSQSDLVLCSRADTTITFANDAFCQFFSRPA 212 Query: 467 HIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLN 525 + W E VL ED + + F E R+ +R + + + + Sbjct: 213 SVVIG-CPWSEFVLAEDLPPLLEKVAQLRPDAPTFVNENRVYHPQYGLRWTQWMNTAIFD 271 Query: 526 KEGEVERLLGINMDMTEVKQL---NEALFQEKERLHITLD 562 EG + + + D+T +K+ +AL + + +LD Sbjct: 272 AEGNLREIQSVGRDITALKEQLLREQALNHVIQAIRNSLD 311 >UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacteria RepID=A2SDI4_METPP Length = 1006 Score = 688 bits (1777), Expect = 0.0, Method: Composition-based stats. Identities = 181/691 (26%), Positives = 308/691 (44%), Gaps = 20/691 (2%) Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQV 474 ++ + + E + + +++ + + + + Sbjct: 302 ERNRQHVHEIEDREAQFRTLYERTPVMMHSVDVERRLVAVNDAWLARLGYERSEVLGRRS 361 Query: 475 WYECVLPEDRQHAEKVIR-DSLQSRSPFKLEFR-ITVKDGIRHIRALANRVLNKEGEVER 532 E + E R+ AE+ I ++ ++++ +T + ++ A + G+ R Sbjct: 362 -TEFLTAESRERAERSIIPRFMREGELRDMDYQMVTRSGEVLDVQISAIWETDAHGQPLR 420 Query: 533 LLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQ 592 L + D+TE K+L L EKER+ +TL SIG+ V+ D A +IT++NPVAE+M G Sbjct: 421 TLAVLKDVTEQKRLALELAAEKERIEVTLHSIGDGVISTDEAGRITYLNPVAEQMVGCLL 480 Query: 593 EEALGVPLLTVLHITFGDNG-PLMENIYSADTSRS--AIEQDVVLHCRSGGSYDVHYSIT 649 +A G+P V+ + ++G PL + R + + L RSG Y V S Sbjct: 481 AQARGLPFAQVVQLFDQESGAPLPSPVEQCLQDREVYGVRESAALRHRSGRDYGVQISAA 540 Query: 650 PLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNS 709 P++ DG +G+V+V QDVTE+R + +++SY A HD LT L NR F+ ++ Q+ Sbjct: 541 PIAGRDGRVLGAVMVFQDVTEARGLAQKMSYLAHHDGLTGLPNRVLFQDRVHQACQSGRR 600 Query: 710 THQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLL 769 +R A++F+DLD FK VNDS GHA GD LL+ +A + LR+SD + RLGGDEF +LL Sbjct: 601 HGRRFAVIFMDLDHFKHVNDSLGHAVGDELLKAVAQRLTGALRASDTICRLGGDEFVVLL 660 Query: 770 PDCN---VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQAD 826 D + V+ +A +I+ V + G VGAS GI L + +M +AD Sbjct: 661 SDLDDVEVDGVAEVAKKILRQVAQ-PCVLGGTEVNVGASLGIALFPGDGEDPDTLMKRAD 719 Query: 827 IACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEA 886 A Y SK GR R + A S R + D + R + Q ++ V R +A Sbjct: 720 AAMYRSKREGRNRYHFFSKAVDDAASARLQLEADMR-RALAAGQFIVHYQPVVHGRTRDA 778 Query: 887 RNLWLISLKLWSCEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK--GI 943 + + +L W G + F + L + V + +Q + GI Sbjct: 779 --VAVEALLRWDRAGQGLQSPAVFIPVAEESGLIVPMGHWVLRQACEQLRAWSGTALGGI 836 Query: 944 SISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLA 999 S+++ +S L+ A V+ + + L + + L I ++ E+ +++L+ Sbjct: 837 SVAVNVSPVQLAQADFVDTVADVLHATGVDGSRLEFEITESTLMQDPEATLEMLRRLKGL 896 Query: 1000 GCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMK 1059 G RI + G LK D L +D +++ + D L+ I A+ L + Sbjct: 897 GVRIAIDDFGTGYSSLGHLKRFPVDTLKIDHTFVRDLEADADDRELVRAILAMARSLRLH 956 Query: 1060 TIAGPVVLPLVMDTLSGIGVDLIYGEVIADA 1090 +A V L+ + G + A Sbjct: 957 VVAEGVETEAQAAILAAMECPAFQGYLFARP 987 Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats. Identities = 114/634 (17%), Positives = 232/634 (36%), Gaps = 17/634 (2%) Query: 24 LVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRHAGRMWPGIALSCSLGNIAASILL 83 ++ F+F ++ LS+ +A LW+ +++ V WP L+ ++ N+AA++ Sbjct: 35 VLHFVFAYGAIHLSRQPGSVATLWYANAVVAVVLLSRRRAEWPLHLLAMAVANVAANLFS 94 Query: 84 FSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQNLADWLRLALGSAIVPPLLGGVLV 143 L++++ N++EA + A LLR P +Q + L + A+VP L+G + Sbjct: 95 GHAPGLSLSFLLPNLLEASLAAALLRLAGPPARCVQQVGALLWALVLGAVVPSLVGATMG 154 Query: 144 VLLTPG---DDPLRAFLIWVLSESIGALALVPLGLLFKPHYLLRHRNPRLLFESLLTLAI 200 + + W + IG ++++PLGLL + + Sbjct: 155 AAVLSMQFDAPVGSLWSAWFVGTVIGGVSVLPLGLLLLARGGRAVWAALARPAVAAVVLV 214 Query: 201 TLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATP 260 + + + ++ + + ++ V LM A A L + V +++A Sbjct: 215 AVATAASASVFSHFRYVYVSVALMLVAAVGGFAGAATGGLLASLSVGIVIALGLFQPGPG 274 Query: 261 RTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGT 320 +L + +LP +L L+P ++ M R I + E FR E + + M V Sbjct: 275 EGWLETVAFYLPVVLTLVPPLLLAAAMERNRQHVHEIEDREAQFRTLYERTPVMMHSVDV 334 Query: 321 EGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRY 380 E + + N A LGY + E+ G + E + + + E M+ + Sbjct: 335 ERRLVAVNDAWLARLGYERSEVLGRRSTEFLTAESRERAERSIIPRFMREGELRDMDYQM 394 Query: 381 YNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGI 440 R+G+V+ ++ G PL +A ++D+ E KR ERI + + G Sbjct: 395 VTRSGEVLDVQISAIWETDAHGQPLRTLAVLKDVTEQKRLALELAAEKERIEVTLHSIGD 454 Query: 441 GIWEWELKPNIFSWDKRMFELYE--IPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSR 498 G+ + I + ++ + + + E + LQ R Sbjct: 455 GVISTDEAGRITYLNPVAEQMVGCLLAQARGLPFAQVVQLFDQESGAPLPSPVEQCLQDR 514 Query: 499 SPFKL-EFRITVKDGIRH--IRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKE 555 + + E R ++ A + ++G V + + D+TE + L + + Sbjct: 515 EVYGVRESAALRHRSGRDYGVQISAAPIAGRDGRVLGAVMVFQDVTEARGLAQKMSYLAH 574 Query: 556 RLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLM 615 H L + V+ D + + + + L H+ + Sbjct: 575 --HDGLTGLPNRVLFQDRVHQACQSGRRHGRRF-----AVIFMDLDHFKHVNDSLGHAVG 627 Query: 616 ENIYSADTSR--SAIEQDVVLHCRSGGSYDVHYS 647 + + A R A+ + G + V S Sbjct: 628 DELLKAVAQRLTGALRASDTICRLGGDEFVVLLS 661 >UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21WS3_RHOFD Length = 1034 Score = 688 bits (1777), Expect = 0.0, Method: Composition-based stats. Identities = 148/701 (21%), Positives = 292/701 (41%), Gaps = 32/701 (4%) Query: 417 LKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSW----DKRMFELYEIPPH-IKPN 471 +R +Q + ++ ++++ L+P+ S + +++ + P + + Sbjct: 340 RRRHSTAQRQALVQLQSLTHHVPGVVFQYLLRPDGSSCFPFASAGLHKIFRLSPEAVAQD 399 Query: 472 WQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRIT-VKDGIRHIRALANRVLNKEGEV 530 + + P+D I+ S ++ +P+ E+R+ +R + + A +G V Sbjct: 400 AAPLFALMHPDDAAGVAASIQASSRALTPWVDEYRVKFGDGTVRWLSSKAAPQKLDDGSV 459 Query: 531 ERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGW 590 G D+T KQ E+L L ++ ++V D I ++NP+ E++SG+ Sbjct: 460 L-WHGFVSDVTAHKQAEESLI----TLSAAVEQSPVSIVISDPRGLIEYVNPMFEQVSGY 514 Query: 591 TQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITP 650 + E +G + + + +++ + + + G + +I P Sbjct: 515 RRAEVMGQNPRIL--SSHEKSEDEYREMWATLLAGDIWHGEFHSRRKDGSLFWEQAAIAP 572 Query: 651 LSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNST 710 + G I + + +D+T+ + ++ + A +D LT L NR +L+ +L + Sbjct: 573 IFDDHGRPIHYLAIKEDITKRKAAEAEIEHLAFYDLLTGLPNRRLLNDRLQQVLAVGTRS 632 Query: 711 HQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLP 770 + AL+FIDLD FK +ND+ GH GD LL+++A + +R D +ARLGGD+F ++L Sbjct: 633 RRHGALLFIDLDNFKNLNDTQGHEQGDVLLQQVAQRLNFCVRECDTVARLGGDDFVVMLQ 692 Query: 771 DCNVE------SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQ 824 D + + A + +I+ A++ + + H AS G+ L + + E++ + Sbjct: 693 DLSEQQTEAATQAEGVGQKILDALHQ-PYPFGHFTHHGSASVGVALFNASQDTVEELLKR 751 Query: 825 ADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIP 884 AD+A Y +K+ GR + ++P A S RA M D + ++ENQ ++ + Sbjct: 752 ADLALYQAKDAGRNTLRFFDPDMQAVISARAEMEADMRL-GLQENQFLLYYQPQVN---H 807 Query: 885 EARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA---VAS 940 R + + +L W ++ F D L L + V +Q + Sbjct: 808 AGRLIGVEALVRWQHPLRGLVAPAHFIPLAEDTGLILPLGQWVMEAACRQLQLWRTQAHT 867 Query: 941 KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKL 996 ++I++ +S + V+D+L L + P L L + ++ + + L Sbjct: 868 AQLTIAVNVSALQFHGESFVSDVLATLARTGAPADRLKLELTESLLVKDVDGVIAKMVAL 927 Query: 997 RLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRL 1056 + G L G + LK D + +D ++ N D L+ + L Sbjct: 928 KAHGVGFSLDDFGTGYSSLSYLKRLPLDQIKIDQSFVSDALSNPKDAALVRATVAMGRGL 987 Query: 1057 GMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 GM IA V + D L G G G P+ L Sbjct: 988 GMMVIAEGVETQMQRDFLEGEGCLNFQGYFFGRPVPVAELA 1028 Score = 91.1 bits (225), Expect = 3e-16, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 3/140 (2%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQL- 350 K ES A+E S + + + G N Q GY + E+ G + L Sbjct: 469 TAHKQAEESLITLSAAVEQSPVSIVISDPRGLIEYVNPMFEQVSGYRRAEVMGQNPRILS 528 Query: 351 TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQ 410 + + ++ + L++G+I + E ++G + W A++ + G P++++A Sbjct: 529 SHEKSEDEYREMWATLLAGDI--WHGEFHSRRKDGSLFWEQAAIAPIFDDHGRPIHYLAI 586 Query: 411 IEDINELKRTEQVNQQLMER 430 EDI + K E + L Sbjct: 587 KEDITKRKAAEAEIEHLAFY 606 >UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q47FQ3_DECAR Length = 1093 Score = 688 bits (1776), Expect = 0.0, Method: Composition-based stats. Identities = 179/881 (20%), Positives = 319/881 (36%), Gaps = 76/881 (8%) Query: 275 LILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQF 334 ++ + A++ V R+ + +S M S++G+ + + + ++ N+ + Sbjct: 222 IVWIAADVTEAVST-----REALEKSSREMEALMANSSVGIVVT-HDRKIVRYNQRFGKL 275 Query: 335 LGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAV 394 G+ E G+ L + + +L + + + E ++G +W L Sbjct: 276 FGFPGENGIGMDTAGLYRSAEEHTELNRRAAPALFQAKPFQTELYMRRQDGSDIWVNLIG 335 Query: 395 SLVRHTDGTP-LYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFS 453 + TD + +++IA+ + E +R+ N GI + Sbjct: 336 YVADPTDPSMGVFWIAEDRTAFKQAEEELKKAYFDQRLIFDNCVAGIAFVRNRV---FQQ 392 Query: 454 WDKRMFELYEIPPHI----KPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITV 509 ++R ELY P + + E + L F E Sbjct: 393 CNRRFEELYGYGPGELTGKPTRVTYFSDKAHAE----IGTTAYEMLGRGETFVSEVVHRR 448 Query: 510 KDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVV 569 ++G + R ++ + + D+T K ++L + L+S ++ Sbjct: 449 QNGDPIWMRITGRAIDPANPNDGSIWNYEDITSRKVAEDSLRESVMLQRAILNSAKLMIL 508 Query: 570 CIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFG--------------DNGPLM 615 D ++ NP E+M + E LG + + D + Sbjct: 509 STDSEGRVISCNPATEQMLAYPSAELLGRTPVECFFLREEIQERRRALSSETGFDPASDI 568 Query: 616 ENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKML 675 + + + S + + G + V SI+ L D G + V D+TE ++ Sbjct: 569 DVLLARVRLGSVDQGQWTFQRKDGEKFIVELSISALHPEDKKAQGFLFVASDITERKRAE 628 Query: 676 R--------------------------------QLSYSASHDALTHLANRASFEKQLRIL 703 +L Y A HDALT LANR +++L Sbjct: 629 DALLRSRDELELRVKERTSELESEVLERRRIESKLRYLAHHDALTGLANRTLLQQRLGEA 688 Query: 704 LQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGD 763 + + A++FIDLDRFK +NDS GH GD LL+ +AS + LRS+D +ARLGGD Sbjct: 689 MDNAAQDDTKVAILFIDLDRFKTINDSLGHHIGDTLLKNVASRLTETLRSNDTIARLGGD 748 Query: 764 EFGLLLP-DCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVM 822 EF ++LP N A +A++I+ A+ +G V S GI ++ +M Sbjct: 749 EFMIILPLKANEALAGKLASKILDALR-PPIRIDGHELFVTPSIGICFYPNDGVTVNALM 807 Query: 823 SQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPR 882 AD A Y +K GR + + AA + D + R + N+ + V + Sbjct: 808 RNADTAMYQAKANGRNTYCYFTAEMNAAADNYFQIESDLR-RAVDRNEFEVFYQPVIDLK 866 Query: 883 IPEARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK 941 R +L W ++ F + L + V + Q + Sbjct: 867 --THRITSYEALVRWRHPTKGLVGPAQFITVAEESGLIGEIGTIVLRQACSQLRSWIDEG 924 Query: 942 GIS--ISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQK 995 S ++L LS + L + L + L P + L I I+ E ++Q Sbjct: 925 FTSPILALNLSPIQFNDPNLTEGICRILRDYDLTPDRIELEITETVIMQDGELALGTLQN 984 Query: 996 LRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQR 1055 L G R+ + G LK D L +D ++ N D ++T I A Sbjct: 985 LSSRGFRLSIDDFGTGYSSLAYLKRFPVDTLKIDRSFITDMTANENDRAIVTAIMALANS 1044 Query: 1056 LGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 L + IA V D LS + + G +A P +++ Sbjct: 1045 LHLSVIAEGVETKEQYDLLSALNCNFAQGYYMAKPMPAEMI 1085 Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats. Identities = 66/442 (14%), Positives = 147/442 (33%), Gaps = 13/442 (2%) Query: 249 MMAADPSLLATPRTYLMSHMPWLPFLLILL----PANIMTMVM---YAFRAERKHISESE 301 + A P + H W + L PA ++ + +++ E+ Sbjct: 59 LSAGKPFHQEIQLRHHDGHTFWADAVAYLFDPRHPAEGTIWIINDISERKQAERNLHETV 118 Query: 302 THFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQ 361 ++ +++G+ L+ N+ + +GY+ +EL G+ L + +++L Sbjct: 119 QELQSIFNNASVGIVFTNRR-TVLRCNRRFEEIVGYASDELHGMPTANLYASAESHEELG 177 Query: 362 QVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTE 421 + + +S K++ ++G ++W + + + + D+ E T Sbjct: 178 RQSSPLLSAGKAFSATKQFRRKDGHLIWCQVFAKAI-DPNDPSRGIVWIAADVTEAVSTR 236 Query: 422 QVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLP 481 + ++ + +GI I +++R +L+ P Sbjct: 237 EALEKSSREMEALMANSSVGIVVTH-DRKIVRYNQRFGKLFGFPGENGIGMDTAGLYRSA 295 Query: 482 EDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMT 541 E+ + +L PF+ E + +DG L V + + I D T Sbjct: 296 EEHTELNRRAAPALFQAKPFQTELYMRRQDGSDIWVNLIGYVADPTDPSMGVFWIAEDRT 355 Query: 542 EVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLL 601 KQ E L + + D+ + + N E++ G+ E G P Sbjct: 356 AFKQAEEELKKAYFDQRLIFDNCVAGIAFVR-NRVFQQCNRRFEELYGYGPGELTGKP-T 413 Query: 602 TVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGS 661 V + + + + Y +VV ++G + + + N GS Sbjct: 414 RVTYFSDKAHAEIGTTAYEMLGRGETFVSEVVHRRQNGDPIWMRITGRAI-DPANPNDGS 472 Query: 662 VLVIQDVTESRKMLRQLSYSAS 683 + +D+T + L S Sbjct: 473 IWNYEDITSRKVAEDSLRESVM 494 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 61/379 (16%), Positives = 134/379 (35%), Gaps = 8/379 (2%) Query: 308 MEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLI 367 M + +G+ L G+ L+ N + G+ E+ G + +QL + + L +V I Sbjct: 1 MNNAPVGI-LYTKNGEILRYNAKFSEIFGFDT-EIIGKSARQLCPSDAAYEALGEVAGPI 58 Query: 368 SGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQL 427 + E + + +G WA AV+ + I I DI+E K+ E+ + Sbjct: 59 LSAGKPFHQEIQLRHHDGHTFWA-DAVAYLFDPRHPAEGTIWIINDISERKQAERNLHET 117 Query: 428 MERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHA 487 ++ + +GI + + ++R E+ E + Sbjct: 118 VQELQSIFNNASVGIVFTNRRT-VLRCNRRFEEIVGYASDELHGMPTANLYASAESHEEL 176 Query: 488 EKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLN 547 + L + F + KDG + + ++ ++ I D+TE Sbjct: 177 GRQSSPLLSAGKAFSATKQFRRKDGHLIWCQVFAKAIDPNDPSRGIVWIAADVTEAVSTR 236 Query: 548 EALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHIT 607 EAL + + + + +V + + N K+ G+ E +G+ + + Sbjct: 237 EALEKSSREMEALMANSSVGIVVTHDRKIVRY-NQRFGKLFGFPGENGIGMDTAGLYR-S 294 Query: 608 FGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQD 667 ++ L A + ++ + + G V+ I ++ ++G + +D Sbjct: 295 AEEHTELNRRAAPALFQAKPFQTELYMRRQDGSDIWVNL-IGYVADPTDPSMGVFWIAED 353 Query: 668 VTESRKMLRQLSYSASHDA 686 T ++ +L A D Sbjct: 354 RTAFKQAEEELKK-AYFDQ 371 >UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NYX4_CHRVO Length = 795 Score = 688 bits (1775), Expect = 0.0, Method: Composition-based stats. Identities = 163/798 (20%), Positives = 314/798 (39%), Gaps = 25/798 (3%) Query: 308 MEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLI 367 + +S M+L +G++L N A + +G S E L G + + ED + +Q ++++ Sbjct: 2 VNHSPTMMSLKDMDGRYLLVNAAYARRVGVSAESLLGRRPEDVFDAEDARQIREQDQQVL 61 Query: 368 SGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQL 427 + E NG + L + + DG P + DI + ++ ++ ++ Sbjct: 62 NLLSPRQFDEHFVL--NGVETYLLASKFPLFDADGRPAGVGSVDTDITQARQEQKAKREA 119 Query: 428 MERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHA 487 +R E +GI+ + + + ++ E+ P + V E + Sbjct: 120 EDRYLALVEQSLVGIYIMQ-DEKLAYVNPKLAEIMGYQPEEMEGMTMPQLLVPGEAERLR 178 Query: 488 EKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLN 547 ++++R + S R KDG+ + +R+ G + ++G+ MD++E + Sbjct: 179 QQLLRRFRDNISVMHYATRGLRKDGVLVDMEVHSRLFELNGR-KAVIGVVMDISERLLAD 237 Query: 548 EALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHIT 607 L ++ E ++ +D +I +N +++G+ +EEALG Sbjct: 238 TNL----RLAAKVFENSAEGILILDAGARIIAVNDAFTRITGYAEEEALGKASRI----- 288 Query: 608 FGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQD 667 F + A + +++ + G Y SI+ L DG V V D Sbjct: 289 FSAEQQARAAMQQALADCGHWQGEMLDRRKGGQWYPAELSISALRDEDGLLSNYVAVFSD 348 Query: 668 VTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAV 727 +T+ ++ +L + A+HD LT L NR+ L L ++ R A++FIDLDRFK + Sbjct: 349 ITQRKEAEERLQFLANHDPLTRLPNRSRLTASLDEALTRMDGEDGRLAVMFIDLDRFKLI 408 Query: 728 NDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNV-ESARFIATRIIS 786 NDS GH GD LL E+A + ++ +LARLGGDEF LL+ + +A+ I++ Sbjct: 409 NDSFGHQVGDQLLCEIAIRLSRVVGERGMLARLGGDEFTLLMSGFDSHHQLADMASDILA 468 Query: 787 AVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQ 846 A+ E + S GI++ + A ++ AD+A Y +K G+ ++ Sbjct: 469 ALGK-PLCLEAHEVFITGSIGISVFPHDGRDARTLLKNADVAMYRAKEAGKNTYQFFDIG 527 Query: 847 QAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIID 905 ER + + ++ ++ + E +L W + ++ Sbjct: 528 MNTQTFERLLLENGLRM-ALERHEFELHYQP--QLSAGERALAGAEALLRWRHPQLGLVP 584 Query: 906 EQTFRRSFSDPALSHALDRRVFHEFFQQAAKA--VASKGISISLPLSVAGLSSATLVNDL 963 F + L + V E +Q A + +++ LS +L + Sbjct: 585 PARFIALAEETGLIKPIGDWVLREACRQLAAWDAQGLRVPRLAVNLSPRQFGQPSLPAKV 644 Query: 964 LEQLENSPLPPRLLHLIIPAEAIL----DHAESVQKLRLAGCRIVLSQVGRDLQIFNSLK 1019 L+ + L L L I I+ + + +L+ G + + G + LK Sbjct: 645 AGALQAAGLAAGRLELEITESMIMQSPTEAVSLLSELKSLGVWLSIDDFGTGYSSLSHLK 704 Query: 1020 ANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGV 1079 D L +D + + + + I A++L + +A V L G G Sbjct: 705 RFPLDTLKIDQSFVEGLPDDDDNAAIAEAILAMAKKLKFQVVAEGVESEEQAAFLEGKGC 764 Query: 1080 DLIYGEVIADAQPLDLLV 1097 ++ G P Sbjct: 765 HVLQGYHFGRPLPAGEFA 782 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 44/273 (16%), Positives = 93/273 (34%), Gaps = 30/273 (10%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + R E+K E+E + +E S +G+ ++ + + N L + +GY EE+ G+T Sbjct: 106 ITQARQEQKAKREAEDRYLALVEQSLVGIYIM-QDEKLAYVNPKLAEIMGYQPEEMEGMT 164 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 QL P + + QQ+ + I+ R ++G +V + L + Sbjct: 165 MPQLLVPGEAERLRQQLLRRFRDNISVMHYATRGLRKDGVLVDMEVHSRLFELNGRKAV- 223 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP 466 I + DI+E + + + E GI + I + + + Sbjct: 224 -IGVVMDISERLLADTNLRLAAK----VFENSAEGILILDAGARIIAVNDAFTRITGYAE 278 Query: 467 HIKPNWQ----------VWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHI 516 D H + + D + + E I Sbjct: 279 EEALGKASRIFSAEQQARAAMQQALADCGHWQGEMLDRRKGGQWYPAELSI--------- 329 Query: 517 RALANRVLNKEGEVERLLGINMDMTEVKQLNEA 549 + + +++G + + + D+T+ K+ E Sbjct: 330 ----SALRDEDGLLSNYVAVFSDITQRKEAEER 358 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 54/144 (37%), Gaps = 4/144 (2%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 +ER + E SA G+ ++ + + N A + GY++EE G + + Sbjct: 231 SERLLADTNLRLAAKVFENSAEGILILDAGARIIAVNDAFTRITGYAEEEALGKASRIFS 290 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 + + + + + E + G A L++S +R DG ++A Sbjct: 291 ----AEQQARAAMQQALADCGHWQGEMLDRRKGGQWYPAELSISALRDEDGLLSNYVAVF 346 Query: 412 EDINELKRTEQVNQQLMERITLAN 435 DI + K E+ Q L L Sbjct: 347 SDITQRKEAEERLQFLANHDPLTR 370 Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 39/117 (33%), Gaps = 3/117 (2%) Query: 560 TLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIY 619 ++ + DM + +N + G + E LG V + Sbjct: 1 MVNHSPTMMSLKDMDGRYLLVNAAYARRVGVSAESLLGRRPEDVFDAEDARQIREQDQQV 60 Query: 620 SADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLR 676 S ++ VL +G + S PL DG G V D+T++R+ + Sbjct: 61 LNLLSPRQFDEHFVL---NGVETYLLASKFPLFDADGRPAGVGSVDTDITQARQEQK 114 >UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultured bacterium RepID=Q20JY5_9BACT Length = 874 Score = 687 bits (1774), Expect = 0.0, Method: Composition-based stats. Identities = 178/756 (23%), Positives = 297/756 (39%), Gaps = 41/756 (5%) Query: 361 QQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRT 420 Q++ +L S + + E + V L R D T I EL Sbjct: 130 QEIHQLASALSSKWRTEHEFQK----VFEDLER----RIEDRTVELMNMNEHLIEELLEE 181 Query: 421 EQVNQQLMERITLANEAG---GIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYE 477 ++ + + +A +GI +L I + E++ V Sbjct: 182 IDERKRAEKHLRQLKQAVETMQLGITITDLDRKIIYMNPAGAEMHGYQVEELLGQDVSM- 240 Query: 478 CVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGIN 537 V PE R+ + + R + + ++ V N +GE ++ Sbjct: 241 FVPPEHRKPLTLERIKEWKGLIRESVNIRKDGTTFLVWL--MSEIVKNAKGEPFAIVTSC 298 Query: 538 MDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALG 597 D+TE KQ EAL + +ER I L+S + VV D K+ + NP ++ GWT +E++G Sbjct: 299 EDITERKQAEEALRKSEERYRIVLESAPDPVVVYDTEGKVAYFNPAFSRVFGWTLDESIG 358 Query: 598 VPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGS 657 + + +N + E I T + + G V+ S Sbjct: 359 RNIDFLPVENVPENKLIFEKINCGKTLSGI---ETYCLTKDGKKVGVNISGAGFFDNHDK 415 Query: 658 NIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILL--------QTVNS 709 GS++ +QD+TE +K ++ + A HD LT L NR SF +L L Sbjct: 416 LQGSIITLQDITERKKTEEEIKFLAYHDVLTGLLNRKSFYTRLEDELIRSYSYDGDRRRI 475 Query: 710 THQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLL 769 + AL F+D+DRFK VND+ GH GD LL+ +A + + LR SD + RLGGDEF ++L Sbjct: 476 KGHKWALFFLDVDRFKYVNDTLGHDVGDELLKVVAVRLKNCLRKSDYIFRLGGDEFTIIL 535 Query: 770 PD-CNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIA 828 D + +A +I A+ + + S GI++ D+ ++ ADIA Sbjct: 536 NDLTDDTDMAKVAQKIRKAIAR-PCRIKDHELYITVSIGISIYPDDGDDVETLVKNADIA 594 Query: 829 CYASKNGGRGR-VTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEAR 887 YA+K + + + ER + + ++ +QL++ + + Sbjct: 595 MYAAKEE--NQGYRFFIEEMNRKTLERMMLE-NNLRNALQHDQLIIYYQPLVD---STNQ 648 Query: 888 NLWLISLKLWS-CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA--VASKGIS 944 + + +L W E +I F + L + + V QQA K + Sbjct: 649 IVGMEALLRWHHPELGLISPSQFIPLAEETGLIVPIGKWVLRCACQQARKWHEMGYTRFY 708 Query: 945 ISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAG 1000 +++ LSV LV + + LE + LPP L L + I++H E ++ LR G Sbjct: 709 VAVNLSVRQFREPDLVETIEQILEATDLPPDCLKLEVTESGIMEHPEQAIAKMKMLRAKG 768 Query: 1001 CRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKT 1060 + G + LK D L +D + N D+ +I I A+ LGM T Sbjct: 769 IHFSIDDFGTGYSSLSYLKRFPIDTLKIDRSFVIDSTTNKDDQEIIKTIIAMARNLGMDT 828 Query: 1061 IAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 +A V D L G ++ G P + Sbjct: 829 VAEGVEAKEQQDFLIHHGCHMMQGYYFGRPMPAEKF 864 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 71/464 (15%), Positives = 155/464 (33%), Gaps = 59/464 (12%) Query: 294 RKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWP 353 RK + + A+E +G+ + + + + N A + GY EEL G P Sbjct: 185 RKRAEKHLRQLKQAVETMQLGITITDLDRKIIYMNPAGAEMHGYQVEELLGQDVSMFVPP 244 Query: 354 EDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIED 413 E + K G I E ++G L +V++ G P + ED Sbjct: 245 EHRKPLTLERIKEWKGLIR----ESVNIRKDGTTFLVWLMSEIVKNAKGEPFAIVTSCED 300 Query: 414 INELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQ 473 I E K+ E+ ++ ER + E+ + ++ + + ++ ++ Sbjct: 301 ITERKQAEEALRKSEERYRIVLESAPDPVVVYDTEGKVAYFNPAFSRVFGWTLDESIGRN 360 Query: 474 VWYECV--LPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVE 531 + + V +PE++ EK+ + ++ S + + +T + + +++ Sbjct: 361 IDFLPVENVPENKLIFEKI--NCGKTLSGIE-TYCLTKDGKKVGVNISGAGFFDNHDKLQ 417 Query: 532 RLLGINMDMTEVKQLNEALFQ-----------EKERLHITLDSIGEAVVCIDMAM----- 575 + D+TE K+ E + ++ + L+ E + Sbjct: 418 GSIITLQDITERKKTEEEIKFLAYHDVLTGLLNRKSFYTRLE--DELIRSYSYDGDRRRI 475 Query: 576 -------------KITFMNPVAEKMSGWTQEEALGVPLLTVLHITF------GDNGPLME 616 + ++N G + + V L L + GD ++ Sbjct: 476 KGHKWALFFLDVDRFKYVNDTLGHDVGDELLKVVAVRLKNCLRKSDYIFRLGGDEFTIIL 535 Query: 617 NIYSADTSRSAIEQDVV------LHCRSGGSYD-VHYSITPLSTLDGSNIGSVLVIQDVT 669 N + DT + + Q + + Y V I+ + DG ++ +++ D+ Sbjct: 536 NDLTDDTDMAKVAQKIRKAIARPCRIKDHELYITVSIGIS-IYPDDGDDVETLVKNADIA 594 Query: 670 ESRKMLRQLSYSASHDALTHLANRASFEK-QLRILLQTVNSTHQ 712 Y + + NR + E+ L L+ Q Sbjct: 595 MYAAKEENQGYRFFIEEM----NRKTLERMMLENNLRNALQHDQ 634 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 66/163 (40%), Gaps = 7/163 (4%) Query: 272 PFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKAL 331 PF ++ +I + + + +SE +R +E + + + TEG+ N A Sbjct: 291 PFAIVTSCEDITE-----RKQAEEALRKSEERYRIVLESAPDPVVVYDTEGKVAYFNPAF 345 Query: 332 CQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWAL 391 + G++ +E G E++ ++ EK+ G+ + +E ++G V Sbjct: 346 SRVFGWTLDESIGRNI-DFLPVENVPENKLIFEKINCGKTLS-GIETYCLTKDGKKVGVN 403 Query: 392 LAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLA 434 ++ + I ++DI E K+TE+ + L L Sbjct: 404 ISGAGFFDNHDKLQGSIITLQDITERKKTEEEIKFLAYHDVLT 446 >UniRef50_C4XRM5 Putative signaling protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XRM5_DESMR Length = 821 Score = 687 bits (1773), Expect = 0.0, Method: Composition-based stats. Identities = 174/805 (21%), Positives = 316/805 (39%), Gaps = 27/805 (3%) Query: 301 ETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDL 360 E +R E S + G L N + G E+ G +Q+ P D + Sbjct: 10 EDVYRRIFESSPNAALVRDASGVVLAVNASFEALFGLDAAEVVGRDLRQVVRPADDGETA 69 Query: 361 QQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRT 420 L +S R+ +G V A DG P+ + DI+ +R Sbjct: 70 GGDWSL---GGAAFSRRTRWTAGDGVTVDACPCQFPAGQVDGKPVSCV-IFRDISGRRRA 125 Query: 421 EQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIP--PHIKPNWQVWYEC 478 E+ + E GI++ ++ + +Y + +++ Sbjct: 126 EEQLDAAERKYRAIFENAVEGIFQTTPGGRYLEVNRTLARIYGFDSVDEMTEHFRDIKNQ 185 Query: 479 VLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD-GIRHIRALANRVLNKEGEVERLLGIN 537 + E ++ + +R+ E I KD + I A V + +G V G Sbjct: 186 LYVEPKRR-DDFVRELSAHDQVRNFESAIHKKDGSVIWISENARVVRDADGAVAYYEGTV 244 Query: 538 MDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALG 597 +D+T+ K+ E L ++ + +A+ IDM I +N E + G+ E G Sbjct: 245 VDITDRKRAEEQLAAQRAYFDQLFANSPQAIALIDMRRNIVDVNHAFEDLFGFKAAEIKG 304 Query: 598 VPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGS 657 + + E+ A S + ++ R G V P+ G Sbjct: 305 YGMRAYIVPKHLLGE--CESTRGAILSGKPMVRETFRQHRDGRLIPVSMIGFPIEF-GGQ 361 Query: 658 NIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQ-RHAL 716 G V + QD++E + Q+++ A HDALT L NR+ F +L L ++A+ Sbjct: 362 PQGIVYIYQDISERKAFEEQITHQAFHDALTGLPNRSLFADRLDRALTRARRRGDYQYAV 421 Query: 717 VFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVE 775 + IDL++FK +ND+ GH AGD LL E++ +++ +RS D +ARLGGDEF ++L + + + Sbjct: 422 LMIDLNKFKGINDTLGHQAGDQLLVEVSRRLMACVRSMDTVARLGGDEFAVILEELKSKK 481 Query: 776 SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNG 835 + RI +A+ + G GAS GI L + +++ ADIA Y +K Sbjct: 482 EVMAVVDRIGAALGK-PCMLCGTTVTPGASVGIVLRTRDYQSPEDILRDADIAMYRAKES 540 Query: 836 GRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLK 895 GR + +++ + + + D + + +L++ + + R +L Sbjct: 541 GRPSM-IFDRRMHQEILDAINLEADLR-AALDRGELLLHYQPIVDVQ--TGRIEGFEALV 596 Query: 896 LW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA----VASKGISISLPLS 950 W + ++ F + L L R V E +Q ++ +S+S+ +S Sbjct: 597 RWDHPDRGLVPPVQFIPLAEETGLIQPLGRFVIAEACRQLRAWQLELPEAEQLSVSVNVS 656 Query: 951 VAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLS 1006 LV+ + LE + L P L L I ++ A+ + +L+ G +I + Sbjct: 657 CHQFVKEGLVDHVAGVLETTGLDPACLKLEITESVLMHDAQHTAGELSRLKALGVKIAID 716 Query: 1007 QVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVV 1066 G + L+ D+L +D + N + ++ I A+ LG+ IA V Sbjct: 717 DFGTGYSSLSYLRQLPIDHLKIDRSFISGDDVNGESQEIVKSIIALARSLGLTVIAEGVE 776 Query: 1067 LPLVMDTLSGIGVDLIYGEVIADAQ 1091 +D L D G + + Sbjct: 777 HQDQLDKLRNADCDKAQGFMFSRPV 801 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 44/271 (16%), Positives = 98/271 (36%), Gaps = 2/271 (0%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + R + + +E +R E + G+ G++L+ N+ L + G+ + Sbjct: 119 ISGRRRAEEQLDAAERKYRAIFENAVEGIFQTTPGGRYLEVNRTLARIYGFDSVDEMTEH 178 Query: 347 FQQLTWPEDLN-KDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPL 405 F+ + + K + +S + E + ++G V+W +VR DG Sbjct: 179 FRDIKNQLYVEPKRRDDFVRELSAHDQVRNFESAIHKKDGSVIWISENARVVRDADGAVA 238 Query: 406 YFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIP 465 Y+ + DI + KR E+ I +++ NI + +L+ Sbjct: 239 YYEGTVVDITDRKRAEEQLAAQRAYFDQLFANSPQAIALIDMRRNIVDVNHAFEDLFGFK 298 Query: 466 PHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLN 525 + ++P+ + R ++ S P E +DG ++ + Sbjct: 299 AAEIKGY-GMRAYIVPKHLLGECESTRGAILSGKPMVRETFRQHRDGRLIPVSMIGFPIE 357 Query: 526 KEGEVERLLGINMDMTEVKQLNEALFQEKER 556 G+ + ++ I D++E K E + + Sbjct: 358 FGGQPQGIVYIYQDISERKAFEEQITHQAFH 388 Score = 60.7 bits (146), Expect = 4e-07, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 46/126 (36%), Gaps = 5/126 (3%) Query: 553 EKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNG 612 ++ +S A + D + + +N E + G E +G L V+ D+G Sbjct: 9 PEDVYRRIFESSPNAALVRDASGVVLAVNASFEALFGLDAAEVVGRDLRQVVRP--ADDG 66 Query: 613 PLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESR 672 +S +A + G + D P +DG + V + +D++ R Sbjct: 67 ETAGGDWS--LGGAAFSRRTRWTAGDGVTVDACPCQFPAGQVDGKPVSCV-IFRDISGRR 123 Query: 673 KMLRQL 678 + QL Sbjct: 124 RAEEQL 129 >UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Betaproteobacteria RepID=C6XEG9_METSD Length = 718 Score = 687 bits (1773), Expect = 0.0, Method: Composition-based stats. Identities = 149/655 (22%), Positives = 265/655 (40%), Gaps = 13/655 (1%) Query: 451 IFSWDKRMFELYEIPPHIKPNW--QVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRIT 508 + F+L P + + E LPEDR + D+L R F++E+RI Sbjct: 55 MLFISDGCFDLTGYRPDELLHNGCTSFEELTLPEDRARIRNTVDDALSRRERFEIEYRIM 114 Query: 509 V-KDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEA 567 IR + + N +G+VE L G D+T+ K +AL + + R ++ E Sbjct: 115 TIDGQIRWVNERGTGIFNPQGQVEALEGFIQDITQRKLNEQALQEAERRYRNIFENSIEG 174 Query: 568 VVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSA 627 + + NP ++ G+ E L L + + + Sbjct: 175 IFQTSQDGQYINANPALARIYGYESPEELIQSLNNIAQQLYVQPESRQAFLTLMQLEDRV 234 Query: 628 IEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDAL 687 + + ++ R G + + + + G + ++D+TE + + Y A+HD L Sbjct: 235 VNFESQIYRRDGSTIWISENARAVRNDAGKLLYFEGTVEDITERKSYNALIEYQATHDDL 294 Query: 688 THLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLM 747 T L NR + +L + + T + A+VF+DLD+FK +NDS GH GD LL +A + Sbjct: 295 TGLPNRTLMQDRLLQAISYADRTASKLAVVFVDLDKFKDINDSMGHFIGDQLLIAMARRL 354 Query: 748 LSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAG 807 S +R SD +AR GGDEF LLL + + A + + A+ EG+ V +S G Sbjct: 355 ESCIRDSDTVARPGGDEFVLLLSNIHGMDALSQTLQRVLALTSEPCSIEGKDFTVTSSIG 414 Query: 808 ITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIK 867 I+L D+ + ++ AD A Y +K G+ Y + + ER M + + Sbjct: 415 ISLYPDDGKTSETLLKNADTAMYKAKQEGKNNFQFYTRELNSILVERLEMEYQMR-NALG 473 Query: 868 ENQLMMLAHGVASPRIPEARNLWLISLKLWS-CEGEIIDEQTFRRSFSDPALSHALDRRV 926 N+ + + R R + +L W +I F + +L + V Sbjct: 474 HNEFHLHYQPKLNLR--TQRITGVEALIRWHNPRQGLISPNRFIPIAEESSLIEQIGSWV 531 Query: 927 FHEFFQQ--AAKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAE 984 + + A ++ + +S+ +S + LV ++ L+ + L P LL L I Sbjct: 532 LEKACMESIALSQLSGYDVPVSVNVSPRQFQQSNLVGNISRVLQETGLKPSLLELEITEG 591 Query: 985 AILD----HAESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNL 1040 + D + + L+ G ++ + G LK D L +D ++ + Sbjct: 592 TLADTSPQFIKVLNDLKGLGIKLAIDDFGTGYSSLGYLKHFPIDNLKIDRSFVMGLESDT 651 Query: 1041 MDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDL 1095 ++ ++ I LG+ +A V D L IG D + G + + P D Sbjct: 652 ANQAILKAIVALGHNLGINLVAEGVETERQRDFLLSIGCDEMQGFLFSQPLPFDQ 706 Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 59/286 (20%), Positives = 104/286 (36%), Gaps = 18/286 (6%) Query: 314 GMA---LVGTEGQWLQTNKALCQFLGYSQEELRG---LTFQQLTWPEDLNKDLQQVEKLI 367 GMA LV L + GY +EL +F++LT PED + V+ + Sbjct: 42 GMAYCCLVDAHWTMLFISDGCFDLTGYRPDELLHNGCTSFEELTLPEDRARIRNTVDDAL 101 Query: 368 SGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQL 427 S + +E R +G + W + + + G I+DI + K EQ Q+ Sbjct: 102 S-RRERFEIEYRIMTIDGQIRWVNERGTGIFNPQGQVEALEGFIQDITQRKLNEQALQEA 160 Query: 428 MERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI--PPHIKPNWQVWYECVL--PED 483 R E GI++ + + + +Y P + + + + PE Sbjct: 161 ERRYRNIFENSIEGIFQTSQDGQYINANPALARIYGYESPEELIQSLNNIAQQLYVQPES 220 Query: 484 RQHAEKVIRDSLQSRSPFKLEFRI-TVKDGIRHIRALANRVLNKEGEVERLLGINMDMTE 542 RQ +++ E +I I A V N G++ G D+TE Sbjct: 221 RQAFLTLMQL---EDRVVNFESQIYRRDGSTIWISENARAVRNDAGKLLYFEGTVEDITE 277 Query: 543 VKQLNEALFQEKERLHITLDSIGEAVVCIDMAMK-ITFMNPVAEKM 587 K N + + H L + + D ++ I++ + A K+ Sbjct: 278 RKSYNALIEY--QATHDDLTGLPNRTLMQDRLLQAISYADRTASKL 321 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 41/167 (24%), Positives = 66/167 (39%), Gaps = 9/167 (5%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGY-SQEELR-- 343 + + + + E+E +RN E S G+ +GQ++ N AL + GY S EEL Sbjct: 147 ITQRKLNEQALQEAERRYRNIFENSIEGIFQTSQDGQYINANPALARIYGYESPEELIQS 206 Query: 344 --GLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTD 401 + Q PE L ++ E + E + Y R+G +W VR+ Sbjct: 207 LNNIAQQLYVQPESRQAFLTLMQL----EDRVVNFESQIYRRDGSTIWISENARAVRNDA 262 Query: 402 GTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELK 448 G LYF +EDI E K + + L + + L+ Sbjct: 263 GKLLYFEGTVEDITERKSYNALIEYQATHDDLTGLPNRTLMQDRLLQ 309 >UniRef50_C7LQR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=C7LQR9_DESBD Length = 1262 Score = 686 bits (1772), Expect = 0.0, Method: Composition-based stats. Identities = 189/825 (22%), Positives = 336/825 (40%), Gaps = 27/825 (3%) Query: 283 MTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEG-QWLQTNKALCQFLGYSQEE 341 + + + + + ++ + ++ +A + + T+ + + N G+ Sbjct: 430 VGHIAHRYNHVLDALHDAVSKTEAIVKSAADAIIVFTTDTLRIISANPGASFIFGHPALR 489 Query: 342 LRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTD 401 L G+T +L + L+ ++ +E NG V ++ Sbjct: 490 LEGMTIPELLPAWGIPGSGDNEASLLHAMRSSNQVEVTGRRANGSQVTLEAVITQSSGRQ 549 Query: 402 GTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFEL 461 G +FI DI+E KR E ++ E E G++ + + ++ Sbjct: 550 G--DFFIGTFRDISERKRYENELRKAEENFRGIFENAVEGMFRTTPHGRYLQANPALAKI 607 Query: 462 YEI--PPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD-GIRHIRA 518 Y P + ++ + E E+ IR + F E I KD + I Sbjct: 608 YGFESPAELMRHYDDISRQLYVE-AGRREEFIRLLGEKEEIFDFESAIRRKDGSVIWISE 666 Query: 519 LANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKIT 578 A V + G V G MD+T+ + + +AL ++ + A+ +D +I Sbjct: 667 NARAVKDAAGNVVCYEGTVMDITQRRAMQQALDRQMALFGQLFEDSPLAIALVDTVGRIA 726 Query: 579 FMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRS 638 +N E + G+ + E LG L I + + +I ++++ + Sbjct: 727 QVNGGFETLFGYKRAEILGKDNR--LFIVPEEQLSEINSIRQRILDGETVQRETLRRTSR 784 Query: 639 GGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEK 698 G V+ P+ + G + QD++E ++ RQ+++ A HD+LT L NR+ F + Sbjct: 785 GDIVPVNLLGHPVR-IGGEITNIFWIYQDISERKEFERQITHQAFHDSLTGLPNRSLFRE 843 Query: 699 QLRILLQTVNSTHQRH-ALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVL 757 +L ++ H A + IDL++FK VNDS GH AGDALL E+AS + S +RS D + Sbjct: 844 RLGRAVERTKRRPDYHFAAMLIDLNKFKWVNDSLGHQAGDALLVEIASRLKSCVRSVDTV 903 Query: 758 ARLGGDEFGLLLPDCNVE-SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNH 816 ARLGGDEF +LL + +A+RI + V F+W G+ GAS GI L + Sbjct: 904 ARLGGDEFAILLEEFRTNKEVISVASRIQNEVRRA-FLWNGKEIVSGASVGIVLQTRDCA 962 Query: 817 QAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAH 876 A +++ ADIA Y +K GRG + V+ + E M +E R I+ N L + Sbjct: 963 GAEDILRDADIAMYKAKERGRGHL-VFHNRMRQEVLEVINME-NELRRAIEGNSLELHYQ 1020 Query: 877 GVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAA 935 + + + +L W E +I F + L L + V + +Q Sbjct: 1021 PIFD--VDGGKLEGFEALVRWRHPEHGMIMPDRFIPLAEESGLIVPLGQWVVNAACRQLK 1078 Query: 936 KA-----VASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH- 989 A G+++S+ LS + TLV+ +L L + + P L L I AI+ Sbjct: 1079 SWDDESGTAEYGLTMSVNLSCKQFAQHTLVDMILRALRENDIAPPRLKLEITESAIILDP 1138 Query: 990 ---AESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLI 1046 AE +++L+ G + + G + L+ D L +D + + ++ Sbjct: 1139 AAAAEKLRRLKEIGVLLAVDDFGTGYSSLSYLRQFPMDILKIDRSFISGTDTPKENAEIV 1198 Query: 1047 TIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQ 1091 I A LG++ A V ++ L I D G + + Sbjct: 1199 RSIVDMAHSLGLRVTAEGVETQEQLERLQSINCDRAQGYMFSKPM 1243 >UniRef50_C6BWZ0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BWZ0_DESAD Length = 716 Score = 686 bits (1771), Expect = 0.0, Method: Composition-based stats. Identities = 136/691 (19%), Positives = 277/691 (40%), Gaps = 31/691 (4%) Query: 431 ITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKV 490 E + + + + + +PP ++ + + PED++ + Sbjct: 22 FKDFIENTDDLFTQVDTDGRFLYVNPSAQKYFGLPPEKCVGLSIF-DFIHPEDKETTAQD 80 Query: 491 IRDSLQSRSP-FKLEFRITV-KDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNE 548 + S F R ++ V + E ++ I D+T K+ E Sbjct: 81 FNKWQKDPSTNFSYINRQMHLNGSFYYMLWTITAVKDSEQKILWFNCIGRDITSHKETEE 140 Query: 549 ALFQEKERLHITLD--------------SIGEAVVCIDMAMKITFMNPVAEKMSGWTQEE 594 L + K++L IT+D E V D I ++N ++G+++EE Sbjct: 141 ELRKAKDQLKITVDQQTEQLKLATAVFKHSSEGVTITDSNNNIRYINDAFTHITGYSEEE 200 Query: 595 ALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTL 654 +G + + + ++ + + E ++ ++G + SI ++ + Sbjct: 201 VIGQNPSILK--SNRHKPSFYKGVWKSIKTNGMWEGEIWNRRKNGEVFPEWISIKAITDV 258 Query: 655 DGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRH 714 G + + V +D++E++ R++ + A HDALT L NR ++R + + N Sbjct: 259 KGEVVNYIAVFRDISEAKASQRKIQHQAYHDALTGLPNRTLLIDRIRKAIASSNDRKSCI 318 Query: 715 ALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-N 773 AL+FIDLD FK +NDS G+ GD++L++ A+ + + D ++R+GGDEF ++L D + Sbjct: 319 ALLFIDLDNFKNINDSLGYVIGDSVLQQAAARIREFIDEKDTVSRIGGDEFVIMLKDLQD 378 Query: 774 VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASK 833 A +A II+ E + S GI L ++ ++ AD A +K Sbjct: 379 KHDAAVMADTIINLFAQA-LTVESHQFTITPSIGIALYPEDGKTPYSLVRNADTAMNKAK 437 Query: 834 NGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLIS 893 GR R ++ P + R +M ++ + +N + + + + + + Sbjct: 438 QEGRNRYHLFTPGLTESALRRISME-NQLRQTASDNGFTVYYQPKVNLH--DNTIVGMEA 494 Query: 894 LKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKG--ISISLPLS 950 L W +G II F + L + +V + G + +S+ LS Sbjct: 495 LIRWIQPDGTIISPAEFIPLAEETGLIVPIGEQVLEAACLDTVELNQRFGTNLKVSVNLS 554 Query: 951 VAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLS 1006 + L+ ++++ + + + P L L I ++D E ++K+ G + + Sbjct: 555 LRQFKQEQLMKNIMDIIAMTAICPSCLELEITESTVMDDIEQTKTILEKMDKLGITLSID 614 Query: 1007 QVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVV 1066 G + LK L +D A + N D+ L+ I A+ + T+A + Sbjct: 615 DFGTGYSSLSHLKNMPMHTLKIDQSFVAGLPHNKSDQKLVKAIMSLARSFDLSTVAEGIE 674 Query: 1067 LPLVMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 P + + +G +++ G + PL+ Sbjct: 675 TPEQYNYMRELGCEVMQGYYYSPPVPLEEFA 705 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 49/286 (17%), Positives = 105/286 (36%), Gaps = 22/286 (7%) Query: 304 FRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQV 363 F++ +E + V T+G++L N + ++ G E+ GL+ PED Q Sbjct: 22 FKDFIENTDDLFTQVDTDGRFLYVNPSAQKYFGLPPEKCVGLSIFDFIHPEDKETTAQDF 81 Query: 364 EKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQV 423 K +S R + NG + L ++ V+ ++ L+F DI K TE+ Sbjct: 82 NKWQKDPSTNFSYINRQMHLNGSFYYMLWTITAVKDSEQKILWFNCIGRDITSHKETEEE 141 Query: 424 NQQLMERITLANEA--------------GGIGIWEWELKPNIFSWDKRMFELYEIPPH-- 467 ++ +++ + + G+ + NI + + Sbjct: 142 LRKAKDQLKITVDQQTEQLKLATAVFKHSSEGVTITDSNNNIRYINDAFTHITGYSEEEV 201 Query: 468 IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA-NRVLNK 526 I N + + K + S+++ ++ E K+G ++ + + Sbjct: 202 IGQNPSILKSNRH---KPSFYKGVWKSIKTNGMWEGEIWNRRKNGEVFPEWISIKAITDV 258 Query: 527 EGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCID 572 +GEV + + D++E K + + + H L + + ID Sbjct: 259 KGEVVNYIAVFRDISEAKASQRKI--QHQAYHDALTGLPNRTLLID 302 Score = 77.6 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 78/198 (39%), Gaps = 16/198 (8%) Query: 544 KQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTV 603 K+++ +E +++ + +D + ++NP A+K G E+ +G+ + Sbjct: 9 KKISPLFSEEGFAFKDFIENTDDLFTQVDTDGRFLYVNPSAQKYFGLPPEKCVGLSIFDF 68 Query: 604 LHITFGDNGPLMENIYSADTSR--SAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGS 661 +H + N + D S S I + + L +G Y + ++IT + + + Sbjct: 69 IHPEDKETTAQDFNKWQKDPSTNFSYINRQMHL---NGSFYYMLWTITAVKDSEQKILWF 125 Query: 662 VLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDL 721 + +D+T ++ +L + +T +QL++ + + + Sbjct: 126 NCIGRDITSHKETEEELRKAKDQLKITVDQQ----TEQLKLATAVFKHSSEGVTIT---- 177 Query: 722 D---RFKAVNDSAGHAAG 736 D + +ND+ H G Sbjct: 178 DSNNNIRYINDAFTHITG 195 Score = 75.7 bits (185), Expect = 9e-12, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 76/222 (34%), Gaps = 8/222 (3%) Query: 295 KHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPE 354 +E ++S+ G+ + + N A GYS+EE+ G L Sbjct: 154 DQQTEQLKLATAVFKHSSEGVTITDSNNNIRYINDAFTHITGYSEEEVIGQNPSILKSNR 213 Query: 355 DLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDI 414 + V K I + E +NG+V +++ + G + +IA DI Sbjct: 214 HKPSFYKGVWKSIK-TNGMWEGEIWNRRKNGEVFPEWISIKAITDVKGEVVNYIAVFRDI 272 Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKR--MFELYEIPPHIKPNW 472 +E K +++ Q L + + ++ I S + R L I N Sbjct: 273 SEAKASQRKIQHQAYHDALTGLPNRTLLID-RIRKAIASSNDRKSCIALLFIDLDNFKNI 331 Query: 473 QVWYECVLPED-RQHAEKVIRDSLQSRSPFKLEFRITVKDGI 513 V+ + Q A IR+ + + RI + + Sbjct: 332 NDSLGYVIGDSVLQQAAARIREFIDEKDTVS---RIGGDEFV 370 >UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5Q6_AZOSB Length = 828 Score = 685 bits (1769), Expect = 0.0, Method: Composition-based stats. Identities = 163/807 (20%), Positives = 299/807 (37%), Gaps = 34/807 (4%) Query: 304 FRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQV 363 +N ++ + G++L N A FLGY+ + + G + +L+ P DL Sbjct: 6 LQNVLDAIPAPVFFKDAAGRYLGCNTAFLDFLGYTADRILGKSVFELSPP-DLAARYHAQ 64 Query: 364 EKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQV 423 ++ + E + N G+ + + T+G + I DI + K+ E+ Sbjct: 65 DQALFDNPGEQVYEAQVQNARGERREVVFYKATFHDTEGKVAGLVGTILDITDRKQAERR 124 Query: 424 NQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVL--- 480 ++ ER+ +A ++ + + + L+ + + W+ Sbjct: 125 VRESEERLGALIQALPDAVFLKDGEGRWLVTNGAAQALFGLAE------RDWFGRTDLEL 178 Query: 481 -PEDRQHAEKVIRDSLQSRSPFK-------LEFRITVKDGIRHIRALANRVLNKEGEVER 532 ED AE + ++ LE + A + + G+ + Sbjct: 179 GSEDPARAEVHAVCARNDELVWQQGGMRQMLEIVEDGQGRRLVFEATRIPLFDSVGQRKG 238 Query: 533 LLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQ 592 ++ + D+TE + E L Q D+ E + D I +NP +++G+ + Sbjct: 239 IVVVGRDITERRAAEERLRQ----AATVFDNTVEGISITDRDGIIQSVNPAFSRITGYAE 294 Query: 593 EEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLS 652 E +G + G + ++ + ++ ++G Y +I + Sbjct: 295 AEVIGCHTRILQSGRHGAD--YYRAMWRTLARTGQWQGEIWNRRKTGEVYPQWLTIGTVR 352 Query: 653 TLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQ 712 +G V V D+++ + QL A +D LT L NRA +L + Sbjct: 353 DDEGEVSNYVAVFSDISQIKDAQSQLERLAHYDPLTGLPNRALLGDRLAHAISRARRAGT 412 Query: 713 RHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD- 771 A++F+DLD FK VNDS GH AGD LL+ +A + LRS ++R GGDEF ++L D Sbjct: 413 SVAVLFLDLDGFKNVNDSLGHPAGDRLLQIIAERLCGALRSEGSVSRFGGDEFAVVLEDV 472 Query: 772 CNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYA 831 E+ +A +I+ + +G V AS GI L + A ++ AD A Y Sbjct: 473 VRGEAVSEVAEHLIAEIAR-PLDLDGHGAHVSASIGIALFPRDGDDATTLIKAADTAMYR 531 Query: 832 SKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWL 891 SK GR + + A A R ++ + + +++ + + R Sbjct: 532 SKALGRNTFSFHHEDMAQAAHRRLSLEHGLR-QALEQGRFELWYQPQIDLRTG-VLAGAE 589 Query: 892 ISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV--ASKGISISLPL 949 L+ E ++ F + L + V E + + I++ + Sbjct: 590 ALLRWRDPERGLVSPAEFVPLAEETGLILPIGLWVLEEACRAGRAWLDVGLAPGRIAVNV 649 Query: 950 SVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVL 1005 + + + L S LPP L + I ++L AE +V LR G + + Sbjct: 650 AAPQIERGGFDQAVARVLSASGLPPAALEVEITEGSLLRSAENARLAVAALRALGVGVAI 709 Query: 1006 SQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPV 1065 G LK L +D E ++ + + + I + LG +A V Sbjct: 710 DDFGTGYSSLAYLKNLAVQTLKIDREFVRDLPHDAGNLAITRAIIAMCRSLGFGVVAEGV 769 Query: 1066 VLPLVMDTLSGIGVDLIYGEVIADAQP 1092 P L G L G + A P Sbjct: 770 EEPAQAAFLVSEGCTLAQGYLFAKPMP 796 Score = 87.6 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 55/143 (38%), Gaps = 1/143 (0%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 ER+ E + + G+++ +G N A + GY++ E+ G + L Sbjct: 247 TERRAAEERLRQAATVFDNTVEGISITDRDGIIQSVNPAFSRITGYAEAEVIGCHTRILQ 306 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 + + + ++ + E + G+V L + VR +G ++A Sbjct: 307 SGRHGADYYRAMWRTLA-RTGQWQGEIWNRRKTGEVYPQWLTIGTVRDDEGEVSNYVAVF 365 Query: 412 EDINELKRTEQVNQQLMERITLA 434 DI+++K + ++L L Sbjct: 366 SDISQIKDAQSQLERLAHYDPLT 388 Score = 57.2 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 39/123 (31%), Gaps = 2/123 (1%) Query: 552 QEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDN 611 ++ L LD+I V D A + N G+T + LG + + Sbjct: 1 MDQGFLQNVLDAIPAPVFFKDAAGRYLGCNTAFLDFLGYTADRILGKSVFELSPPDLAAR 60 Query: 612 GPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTES 671 + + E V G +V + +G G V I D+T+ Sbjct: 61 YHAQDQALFDNPGEQVYEAQVQNAR--GERREVVFYKATFHDTEGKVAGLVGTILDITDR 118 Query: 672 RKM 674 ++ Sbjct: 119 KQA 121 >UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L987_TOLAT Length = 1098 Score = 685 bits (1768), Expect = 0.0, Method: Composition-based stats. Identities = 157/707 (22%), Positives = 271/707 (38%), Gaps = 25/707 (3%) Query: 404 PLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKP--NIFSWDKRMFEL 461 Y + + E Q E +A ++ W+ + + Sbjct: 381 VTYALDMLLQAKERANALIALQNAAE----VIDASPTILFRWQPNSSWKMEYVSSNVQRW 436 Query: 462 YEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRS-PFKLEFRITVK-DGIRHIRAL 519 + + PED Q + +++R + LE R+ + Sbjct: 437 GYQADDFINGKLTMSDLLHPEDLQRVWAEVIHHIETRHKEYILECRVRTAAGEYLWVENH 496 Query: 520 ANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITF 579 +++G+ +R G+ D+T+ K L Q I +S E +V D I Sbjct: 497 VTTSFDRKGKPQRFTGVMTDITQQKNNELQLRQ----AAIVFESTREGIVITDAERNIIK 552 Query: 580 MNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSG 639 +N + G+ + E LG + H + +G + + A ++ ++G Sbjct: 553 VNRALIDLFGYPENELLGQRPR-IFH-SGKHDGHFYQQMLQALDEHGFWRGEMWNRRQNG 610 Query: 640 GSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQ 699 + SI P+ +G + + + D+++ + +L + A HD LT L NRA ++ Sbjct: 611 ELLPMMTSINPVCDSNGEILYYISIYTDISQLKDSEARLEHMALHDPLTGLPNRAMLGQK 670 Query: 700 LRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLAR 759 L LQ R AL+ +DLD FK VNDS GH GD LL ++++ + LR SDV+ R Sbjct: 671 LDSALQHAMLNSTRVALLMLDLDHFKNVNDSFGHHFGDELLHQVSARLKQQLRESDVVCR 730 Query: 760 LGGDEFGLLL-PDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQA 818 LGGDEF +LL + + + +A RII A++ + R +G S GI+L ++ A Sbjct: 731 LGGDEFTVLLQNNPSPDDVSLLAERIIHALHQPFLLSNAREVMIGTSIGISLYPEHGSTA 790 Query: 819 AEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGV 878 E+M QAD A Y +K+ GR + + R + R I + + Sbjct: 791 EELMQQADTAMYRAKHDGRDGYRYFSEELFLKAKARLELE-QRLHRAITGQEFKVFYQPQ 849 Query: 879 ASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA 937 S I + + +L W E +I F + L + V +E +Q Sbjct: 850 IS--IKTNQIIGAEALLRWDDPEYGLIPPSEFISVAEETGLIQNIGEWVLYETCRQGRDW 907 Query: 938 VAS--KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES--- 992 + I++++ LS L + + L NS P L L + A+++ E Sbjct: 908 LDQHLPPINLAVNLSPLQLHHGDVRQLIGTILHNSGFPAHHLELELTESALMEQQEETVK 967 Query: 993 -VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQG 1051 +Q LR G RI + G LK D L +D ++ D + I Sbjct: 968 ILQGLRQQGIRIAIDDFGTGYSSLAYLKQFPLDVLKIDKRFVEDIPHERDDMEIAATIVA 1027 Query: 1052 HAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 L + +A V ++ L G D G + + P + Sbjct: 1028 MGHSLRLTVLAEGVETKAQLEFLEQQGCDYYQGYLYSMPLPAEEFAQ 1074 Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 87/534 (16%), Positives = 188/534 (35%), Gaps = 83/534 (15%) Query: 226 SAVRLPRMEAF-LIFLTTVMMVSLMMAADPSLLATPR---------TYLMSHMPWLPFLL 275 + ++P A ++ TV+ V+ + SL + T+ +S ++ + Sbjct: 4 ATAQIPLRTATRIMLFYTVLSVAWFYFSGYSLSPSATKGAPPFDSLTFWVSLTTFITGIT 63 Query: 276 ILLPANIMTMVMYAFRAER--KHISESETHFRNAMEYSAIGMALV-GTEGQWLQTNKALC 332 + + ++ Y + + ++E + + + +GMA+ G WL+ N L Sbjct: 64 VGVFFLLVWRQHYMQHRQALSRRVAEKDRLLHHFFDLPLLGMAITTNANGSWLRFNDHLS 123 Query: 333 QFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALL 392 S++EL L LT P+D D Q+ ++ GE Y EKR+ +G +++AL+ Sbjct: 124 TLFNLSRDELAELNLLALTHPDDRPYDRQEWMRMQDGESQGYRREKRFVRPDGSMLFALV 183 Query: 393 AVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELK---- 448 +RH DG+ I IEDI+ + ++ + I + + Sbjct: 184 DTRCIRHPDGSIDCMINVIEDISAR-KNSELRLIRQNNLYDMLSLTNQAIVRSQDRLVLL 242 Query: 449 -----------PNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKV------- 490 +F+W + + + + + + D Q ++ Sbjct: 243 QNICRIAVRNGGFVFAWVSATEQEHSSHVASYGHDNGFLQFI--RDYQQQHRLSAGSHAP 300 Query: 491 ----IRDSLQSRSPFKLEFRITVKDGIRHIRALANR---------VLNKEGEVERLLGIN 537 ++ + S L + ++ A R V+ ++G+V L + Sbjct: 301 VLMPTDRAIAAESHVILNH-FLTDESVQPFHEAATRAGFQSAGYFVIREKGQVIGALNLY 359 Query: 538 MD----------------MTEVKQLNEALFQEKERLHI--TLDSIGEAV---------VC 570 D + +V + L Q KER + L + E + Sbjct: 360 ADEPDFFSPEVRATLNDMVMDVTYALDMLLQAKERANALIALQNAAEVIDASPTILFRWQ 419 Query: 571 IDMAMKITFMNPVAEKMSGWTQEEAL-GV-PLLTVLHITFGDNGPLMENIYSADTSRSAI 628 + + K+ +++ ++ G+ ++ + G + +LH E I+ +T Sbjct: 420 PNSSWKMEYVSSNVQR-WGYQADDFINGKLTMSDLLHPEDLQRV-WAEVIHHIETRHKEY 477 Query: 629 EQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSA 682 + + +G V +T G V+ D+T+ + QL +A Sbjct: 478 ILECRVRTAAGEYLWVENHVTTSFDRKGKPQRFTGVMTDITQQKNNELQLRQAA 531 Score = 95.7 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 52/288 (18%), Positives = 102/288 (35%), Gaps = 36/288 (12%) Query: 336 GYSQEELRG--LTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLA 393 GY ++ LT L PEDL + +V I Y +E R G+ +W Sbjct: 437 GYQADDFINGKLTMSDLLHPEDLQRVWAEVIHHIETRHKEYILECRVRTAAGEYLWVENH 496 Query: 394 VSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFS 453 V+ G P F + DI + K E +Q + E+ GI + + NI Sbjct: 497 VTTSFDRKGKPQRFTGVMTDITQQKNNELQLRQAA----IVFESTREGIVITDAERNIIK 552 Query: 454 WDKRMFELYEIPPH--IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD 511 ++ + +L+ P + + ++++ H + + +L ++ E ++ Sbjct: 553 VNRALIDLFGYPENELLGQRPRIFHSGKHD---GHFYQQMLQALDEHGFWRGEMWNRRQN 609 Query: 512 -GIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQ------------------ 552 + + N V + GE+ + I D++++K L Sbjct: 610 GELLPMMTSINPVCDSNGEILYYISIYTDISQLKDSEARLEHMALHDPLTGLPNRAMLGQ 669 Query: 553 --EKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGV 598 + H L+S A++ +D+ +N G +E L Sbjct: 670 KLDSALQHAMLNSTRVALLMLDLD-HFKNVNDSFGHHFG---DELLHQ 713 Score = 79.1 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 31/137 (22%), Positives = 61/137 (44%), Gaps = 4/137 (2%) Query: 301 ETHFRNA---MEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLN 357 E R A E + G+ + E ++ N+AL GY + EL G + + Sbjct: 524 ELQLRQAAIVFESTREGIVITDAERNIIKVNRALIDLFGYPENELLGQRPRIFHSGKHDG 583 Query: 358 KDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINEL 417 QQ+ + + E + E +NG+++ + +++ V ++G LY+I+ DI++L Sbjct: 584 HFYQQMLQALD-EHGFWRGEMWNRRQNGELLPMMTSINPVCDSNGEILYYISIYTDISQL 642 Query: 418 KRTEQVNQQLMERITLA 434 K +E + + L Sbjct: 643 KDSEARLEHMALHDPLT 659 Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 22/154 (14%), Positives = 48/154 (31%), Gaps = 2/154 (1%) Query: 540 MTEVKQLNEALFQEKERLHITLD-SIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGV 598 M + L+ + ++ LH D + + + N + +++E + Sbjct: 77 MQHRQALSRRVAEKDRLLHHFFDLPLLGMAITTNANGSWLRFNDHLSTLFNLSRDELAEL 136 Query: 599 PLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSN 658 LL + H E + D ++ G + DGS Sbjct: 137 NLLALTHPDDRPYD-RQEWMRMQDGESQGYRREKRFVRPDGSMLFALVDTRCIRHPDGSI 195 Query: 659 IGSVLVIQDVTESRKMLRQLSYSASHDALTHLAN 692 + VI+D++ + +L + + L N Sbjct: 196 DCMINVIEDISARKNSELRLIRQNNLYDMLSLTN 229 >UniRef50_Q88QU8 Sensory box protein n=22 Tax=Gammaproteobacteria RepID=Q88QU8_PSEPK Length = 1247 Score = 684 bits (1766), Expect = 0.0, Method: Composition-based stats. Identities = 186/836 (22%), Positives = 338/836 (40%), Gaps = 38/836 (4%) Query: 280 ANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGT--EGQWLQTNKALCQFLGY 337 + + + + + SE F + + + L+ +G L+ N+A + +G Sbjct: 415 MRGLMIDISETKRTEDALRLSEQKFASVFQQCPD-ILLIARHSDGCLLEVNEAFEEQIGL 473 Query: 338 SQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLV 397 +++ G T L +E+L G I ++E + NG + L + Sbjct: 474 PPDQVIGRTATDLDLWGVEGSGPLLLERLHQGGIR--NLEMSFRRSNGQLFTGLTSAE-T 530 Query: 398 RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIF-SWDK 456 DGTP +A + DI++LK T+Q Q E+ A A G+ + ++ Sbjct: 531 FELDGTPALVVA-VRDISQLKETQQQLQTSEEKFAKAFHASPDGLLLSRQSDGLLLEVNE 589 Query: 457 RMFELYEIP-----PHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD 511 L + +W + E ++ +++ RD I D Sbjct: 590 GFCRLTGYDLNPTIDQTSLDLGIWVDL--NERKRLVDQLNRDGFVRDFTCH----IRRSD 643 Query: 512 GIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCI 571 G + L+ R L G V+ +L I D+TE + E L + ++ E V+ Sbjct: 644 GQIRLCELSARPLPITG-VDCMLTIARDITERHLMQEKL----QLAATVFENTAEGVLIT 698 Query: 572 DMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQD 631 D+ +I+ +N +++G+++ EALG + + + ++ T+ + + Sbjct: 699 DIDQRISAVNRAFSEITGYSEIEALGQTPRLL--ASGQHDSAFYLAMWHQLTAEGHWQGE 756 Query: 632 VVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLA 691 + ++G Y +I+ + D V V D++ + +L Y A HD LT L Sbjct: 757 IYNKRKNGELYPSWLTISAVRNSDREITHFVAVFADISSIKHAQAKLDYQAHHDPLTGLP 816 Query: 692 NRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSML 751 NR FE +L+ +L ++++ A++F+DLDRFK +NDS GH GD LL+ +A + + Sbjct: 817 NRTLFENRLQGVLTCAQVSNRQGAVLFLDLDRFKHINDSLGHPVGDLLLKGIAQRLKEQV 876 Query: 752 RSSDVLARLGGDEFGLLLPDCN-VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITL 810 R D +ARLGGDEF +LLP + A IA ++++ N F AS GI+L Sbjct: 877 RDVDTVARLGGDEFIILLPGLHKPSDASTIANKLLACFNA-PFQAGEHEFFTSASIGISL 935 Query: 811 IDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQ 870 + + ++ AD A Y SK GR RV Y A SER A+ + + R ++ N+ Sbjct: 936 YPQDGTDVSTLIRNADAAMYRSKAKGRNRVEAYTRDLTAQASERIALEHELR-RAVERNE 994 Query: 871 LMMLAHGVASPRIPEARNLWLISLKLWSCEG-EIIDEQTFRRSFSDPALSHALDRRVFHE 929 + + S + + +L WS + + F + L V + Sbjct: 995 MSLCFQPKLSLKTQS--LVGAEALIRWSHPTFGEVPPEHFIHLAEENGTILQLGDWVLEQ 1052 Query: 930 FFQQAAKAVAS--KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAIL 987 +Q +S+ L+ A L L + + L++ L L L I I+ Sbjct: 1053 ACRQMQAWKQHYQPFGPLSINLAGAQLRHPHLARRIEQLLKHHQLKAGDLQLEITENFIM 1112 Query: 988 DHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDE 1043 AE + +L+ G ++ + G + LK D L +D + + D Sbjct: 1113 SQAEEALAVLYQLKKLGVQLAIDDFGTGYSSLSYLKRLPLDILKIDKSFIRGLPDDPHDA 1172 Query: 1044 MLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNS 1099 + I + + + IA V L+ G + I G +++ P + + Sbjct: 1173 AIARAIIALGRSMQLTIIAEGVENQAQQRFLAAEGCEQIQGYIVSLPLPPEEFAAA 1228 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 67/432 (15%), Positives = 152/432 (35%), Gaps = 31/432 (7%) Query: 264 LMSHMPWLPFLLILLPANIMTMVMYAFR-AERKHISESETHFRNAMEY-SAIGMALVGTE 321 L + + + L +++ N + R A + + SE H+R +E SAI + Sbjct: 272 LPTVLLLMAVLAVVIRINRRLSSEISRRIALEQELRSSEYHYRGLVESLSAIAWEADAND 331 Query: 322 GQWLQTNKALCQFLGYSQEE-LRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRY 380 + + LGY + LR ++ + PED Q + +S++ R Sbjct: 332 FTYSYVSPHAEDLLGYPLSDWLRPGFWRSILHPED-ALWAQAYCDSETAAGRDHSLDYRV 390 Query: 381 YNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGI 440 +G +W VS++ H + + DI+E KRTE + ++ + Sbjct: 391 IRADGQPLWVRNIVSMIEHGHQPVMR--GLMIDISETKRTEDALRLSEQKFASVFQQCPD 448 Query: 441 GIWEWELKPN-IFSWDKRMFELYEIPPH-----IKPNWQVWYECVLPEDRQHAEKVIRDS 494 + + ++ E +PP + +W + + ++ + Sbjct: 449 ILLIARHSDGCLLEVNEAFEEQIGLPPDQVIGRTATDLDLWG-------VEGSGPLLLER 501 Query: 495 LQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEK 554 L LE +G + +G ++ + D++++K+ + L + Sbjct: 502 LHQGGIRNLEMSFRRSNGQLFTGLTSAETFELDGTPALVVAV-RDISQLKETQQQLQTSE 560 Query: 555 ERLHITLDSIGEAVVCIDM-AMKITFMNPVAEKMSGWTQEEALGVPLLTV-LHITFGDNG 612 E+ + + ++ + +N +++G+ + L + + + + Sbjct: 561 EKFAKAFHASPDGLLLSRQSDGLLLEVNEGFCRLTGYDLNPTIDQTSLDLGIWVDLNERK 620 Query: 613 PLMENIYSADTSRSAIEQDVVLHCR--SGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTE 670 L++ + +R +D H R G S PL + + +D+TE Sbjct: 621 RLVDQL-----NRDGFVRDFTCHIRRSDGQIRLCELSARPLPIT--GVDCMLTIARDITE 673 Query: 671 SRKMLRQLSYSA 682 M +L +A Sbjct: 674 RHLMQEKLQLAA 685 >UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RPL3_RHORT Length = 855 Score = 683 bits (1764), Expect = 0.0, Method: Composition-based stats. Identities = 170/813 (20%), Positives = 310/813 (38%), Gaps = 31/813 (3%) Query: 300 SETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKD 359 S F++ +E +G AL+ +G + N L +G + + L G P D Sbjct: 37 SAALFQSVVEALPVGTALL-RDGVIVHANATLAGQIGETIDTLIGSPLTSYLTPADALAV 95 Query: 360 LQQVEKLIS--GEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINEL 417 + VE I+ G + + + +G L S + +G + D+ Sbjct: 96 QKVVEGAIALHGGVPVRRIAH-IRHISGSERVYSLRFSPL--DNGPHPLLVVITRDMTAQ 152 Query: 418 KRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI--PPHIKPNWQVW 475 E + + E GI++ + + +Y P + ++ Sbjct: 153 VAAENALRAAEGKYRAIFENAVEGIYQSTPDGTYLDVNPALARIYGYASPAELIAHFTDI 212 Query: 476 YECVLPE--DRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERL 533 + + R ++++R++ + R F E I A V + EV Sbjct: 213 ASQLYVDGTKRGEFQRLMRETGEVR-DFTAEVW-RCDGHTIWITENARCVRGPDNEVLYY 270 Query: 534 LGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQE 593 G D+T +Q E + L SI E +V ++ + + +NP E M+G ++ Sbjct: 271 EGTVEDITAQRQSQETM----RLLGKVFTSIAEGIVLLERDLTVRTVNPAFEAMTGLLRQ 326 Query: 594 EALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLST 653 + G P ++ + + + ++ R G Y ++T + T Sbjct: 327 DMEGRPARLFASGLHEND--FLATVAAEVDRAGLWRGEIWGERREGPPYSGEMTVTAVRT 384 Query: 654 LDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQR 713 G V I D+T+ ++ + + A+ D LTHL NR +L + T ++ Sbjct: 385 RAGETTHYVAAITDITKRKRDEEHIRFQANFDMLTHLPNRHLIMDRLEQAMHQAQRTGRQ 444 Query: 714 HALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN 773 ++F+DLDRFK +NDS GH+AGD +L+ A + + +R SD + RLGGDEF ++L + Sbjct: 445 VCVMFLDLDRFKQINDSYGHSAGDEVLKLTARRLRNCVRISDSVGRLGGDEFIVILSNVE 504 Query: 774 VESARF-IATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYAS 832 + A IA +I+ ++++ F G S GIT D+ A +++ AD+A Y + Sbjct: 505 DQHAGAYIAEKILYSLSE-PFPIGGTEVFCIPSVGITYFPDHGETAPDLLRNADVAMYHA 563 Query: 833 KNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLI 892 K GG R ++ P A M D + + ++ + + + Sbjct: 564 KQGGERRYAIFTPDMARRSLALLTMESDLR-HALARDEFELHFQPKVRADL---TLIGAE 619 Query: 893 SLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGI--SISLPL 949 +L W E +I+ F + L + R E + A S+S+ + Sbjct: 620 ALIRWRHPEKGLINPGDFIPLAEESGLILPIGRWTLREACDRVMSWRAEGLTIPSVSVNV 679 Query: 950 SVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVL 1005 S TLV + + L + L P L L I + E +++ L+ G + + Sbjct: 680 SPRQFQDQTLVETVRQILVETGLEPEALDLEITETVMTGDVEHAVGTLRALKDLGVTLSI 739 Query: 1006 SQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPV 1065 G N LK D L +D +V + D +++ I A+ LG +A V Sbjct: 740 DDFGTGYSSLNYLKTFPIDTLKIDQTFVRDVLHSGKDAAIVSTIIALARNLGFSVVAEGV 799 Query: 1066 VLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 + L G + + P Sbjct: 800 EEIEQAEFLGSRDCQNFQGFLYSRPLPPAEFTT 832 Score = 109 bits (272), Expect = 9e-22, Method: Composition-based stats. Identities = 43/285 (15%), Positives = 96/285 (33%), Gaps = 18/285 (6%) Query: 274 LLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQ 333 LL+++ ++ V A + +E +R E + G+ +G +L N AL + Sbjct: 141 LLVVITRDMTAQV-----AAENALRAAEGKYRAIFENAVEGIYQSTPDGTYLDVNPALAR 195 Query: 334 FLGY-SQEELRGLTFQQLTWPEDLNKD-LQQVEKLISGEINTYSMEKRYYNRNGDVVWAL 391 GY S EL F + ++ + ++L+ + +G +W Sbjct: 196 IYGYASPAELIA-HFTDIASQLYVDGTKRGEFQRLMRETGEVRDFTAEVWRCDGHTIWIT 254 Query: 392 LAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNI 451 VR D LY+ +EDI ++++ + M + + GI E + Sbjct: 255 ENARCVRGPDNEVLYYEGTVEDITAQRQSQ----ETMRLLGKVFTSIAEGIVLLERDLTV 310 Query: 452 FSWDKRMFELYEIPPHIKPN--WQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFR-IT 508 + + + + +++ + D + + ++ E Sbjct: 311 RTVNPAFEAMTGLLRQDMEGRPARLFASGLHEND---FLATVAAEVDRAGLWRGEIWGER 367 Query: 509 VKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQE 553 + V + GE + D+T+ K+ E + + Sbjct: 368 REGPPYSGEMTVTAVRTRAGETTHYVAAITDITKRKRDEEHIRFQ 412 >UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JX80_DESAC Length = 678 Score = 683 bits (1764), Expect = 0.0, Method: Composition-based stats. Identities = 140/679 (20%), Positives = 263/679 (38%), Gaps = 14/679 (2%) Query: 429 ERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAE 488 + E I I ++ E + +++ + + + Sbjct: 1 MQYADLLENSNDLIQVVGFDGRIIYANRMWQETLGYGKNDLTQLN-FFDLLHADFHCDCQ 59 Query: 489 KVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNE 548 I+ + + + E + G + I + + + GE + G D+T K+ + Sbjct: 60 DRIQRLMSGETVPRFEVEYKTRYGHKIIAEGSISLYKENGEPCGIQGFFRDITARKKTEK 119 Query: 549 ALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITF 608 AL +ER +S + + N G+ +EE L + + V H Sbjct: 120 ALQTSEERFRTIYESSVAGIAMLAPDGHFLQANSAFCNFLGYNEEELLQMKITDVTHPDD 179 Query: 609 GDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDV 668 ++ NI A+ S + + + G + S T +G+ + +V VIQD+ Sbjct: 180 IEDTLSRRNIARANRLHSIVC-EKRYIRKDGSVFWAQLSSTWFFDANGNPLYTVPVIQDI 238 Query: 669 TESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVN 728 T ++ ++ A +D+LT LANR F +L ++ R AL+F+DLDRFK VN Sbjct: 239 TRRKEAEERIRELAYYDSLTGLANRTLFNDRLDQVMARSRRRQSRFALMFLDLDRFKGVN 298 Query: 729 DSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVES-ARFIATRIISA 787 D+ GHA GDA+LR+ A + LR +D +ARLGGDEF ++L D ++ +A +I+ A Sbjct: 299 DTLGHAVGDAMLRQAAERLNECLRENDTVARLGGDEFVIILSDYKEDANLPRVADKILKA 358 Query: 788 VNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQ 847 ++ F R S GI + D+ +A +++ AD+A YA+K G Y + Sbjct: 359 LSS-PFDLGVREVYSSTSVGIAIYPDDGDEATDLLRHADMAMYAAKESGGDTFRFYSSEM 417 Query: 848 AAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEG-EIIDE 906 A R M + + R +++ + + + + +L W +I Sbjct: 418 NARAVSRMDMEANLR-RALEQEEFFIEYQPQIDLITN--KVAGVEALLRWQHPQLGVIPP 474 Query: 907 QTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK--GISISLPLSVAGLSSATLVNDLL 964 F + L L V F+Q + + +S V+ + Sbjct: 475 TQFIGLAEETNLILPLGEWVMRRVFEQCVMWKQEGYLPFRVGINVSGRQFVQPDFVDMVC 534 Query: 965 EQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLSQVGRDLQIFNSLKA 1020 L+ + P LL I ++ + +++ L+ G + + G + LK Sbjct: 535 RLLDETGAAPELLEFEITESVVMKDVDAAVLTLEALKKLGINMAIDDFGTGYSSLSCLKH 594 Query: 1021 NMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVD 1080 + L +D +++Q N D ++ A+RL + A V + D Sbjct: 595 LPLNRLKIDKSFISDLQDNADDRAIVEATIAMAKRLELGVTAEGVETEGQYGFVQKRECD 654 Query: 1081 LIYGEVIADAQPLDLLVNS 1099 + G + + ++ Sbjct: 655 EVQGFYFSRPLSPSEVADA 673 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 12/190 (6%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + A + K + SE FR E S G+A++ +G +LQ N A C FLGY++EEL + Sbjct: 111 ITARKKTEKALQTSEERFRTIYESSVAGIAMLAPDGHFLQANSAFCNFLGYNEEELLQMK 170 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 +T P+D+ L + + +++ EKRY ++G V WA L+ + +G PLY Sbjct: 171 ITDVTHPDDIEDTLSRRNIARANRLHSIVCEKRYIRKDGSVFWAQLSSTWFFDANGNPLY 230 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP 466 + I+DI K E+ ++L +L A N ++ R+ ++ Sbjct: 231 TVPVIQDITRRKEAEERIRELAYYDSLTGLA------------NRTLFNDRLDQVMARSR 278 Query: 467 HIKPNWQVWY 476 + + + + Sbjct: 279 RRQSRFALMF 288 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 51/252 (20%), Positives = 95/252 (37%), Gaps = 5/252 (1%) Query: 303 HFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQ 362 + + +E S + +VG +G+ + N+ + LGY + +L L F L + + Sbjct: 2 QYADLLENSNDLIQVVGFDGRIIYANRMWQETLGYGKNDLTQLNFFDLLHADFHCDCQDR 61 Query: 363 VEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQ 422 +++L+SGE E Y R G + A ++SL + +G P DI K+TE+ Sbjct: 62 IQRLMSGETVP-RFEVEYKTRYGHKIIAEGSISLYK-ENGEPCGIQGFFRDITARKKTEK 119 Query: 423 VNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPE 482 Q ER E+ GI + + ++ + P+ Sbjct: 120 ALQTSEERFRTIYESSVAGIAMLAPDGHFLQANSAFCNFLGYNEEELLQMKI-TDVTHPD 178 Query: 483 DRQHAEKVIRDSLQSR-SPFKLEFRITVKDGIRHIRALANR-VLNKEGEVERLLGINMDM 540 D + + +R E R KDG L++ + G + + D+ Sbjct: 179 DIEDTLSRRNIARANRLHSIVCEKRYIRKDGSVFWAQLSSTWFFDANGNPLYTVPVIQDI 238 Query: 541 TEVKQLNEALFQ 552 T K+ E + + Sbjct: 239 TRRKEAEERIRE 250 >UniRef50_B2UHK4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Ralstonia RepID=B2UHK4_RALPJ Length = 1183 Score = 683 bits (1763), Expect = 0.0, Method: Composition-based stats. Identities = 169/816 (20%), Positives = 317/816 (38%), Gaps = 42/816 (5%) Query: 302 THFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEEL-------------RGLTFQ 348 F+ + + N +L + LG S L R LTFQ Sbjct: 367 ERFQRVARATNDWIFDWDIATGESWANASLHRLLG-SDALLGQGDDDGTGGGTSRTLTFQ 425 Query: 349 QLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFI 408 Q P+D++ ++ +++ + +++ R + N + SL R DG + + Sbjct: 426 QFVHPDDVDAFAHELRTVLNSDRDSWQHVCRVIDANRATRTVEIRASLYRDQDGRAVRMV 485 Query: 409 AQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHI 468 + DI++ EQ + + +A + +G W W++ + +W M+ L +PP Sbjct: 486 GGVTDISQRSAIEQELRSSEANLRVAEQIALLGSWRWDVLRDSTTWSSGMYVLTGMPPGA 545 Query: 469 KPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFR-ITVKDGIRHIRALANRVLNKE 527 P + + + + ++ + LE I R + + N N Sbjct: 546 PPAFAQQAQFFTADSYNRLREAASRAVTEGEAYSLELEMIRRDGEHRWVLSRGNIERNDR 605 Query: 528 GEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCID---MAMKITFMNPVA 584 EV L G D+T+ ++ +E L L ++S+ + D I ++NP Sbjct: 606 DEVVALFGTMQDITDRRESDEQL----RLLRRVVESVPSGITVADAQQPDFPIVYVNPGF 661 Query: 585 EKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDV 644 E+M+G+ EE LG + G P + + +A S I + + G ++ Sbjct: 662 ERMTGYRAEEILGRNARFLHSSEPG--QPALNEVRTALRDESEIRVLLRNFRKDGHAFLN 719 Query: 645 HYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILL 704 ++ ++P+ G+ V + DVTE +L+ A+ D+LT L NR +++ + Sbjct: 720 NFLLSPVRDAKGAVTHYVGIQDDVTEQEMTRTRLAQHATIDSLTGLPNRTLLADRVQQSV 779 Query: 705 QTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDE 764 + R + +++DRFK VNDS GH GD +LR +A + + D +AR GGD Sbjct: 780 EMAARQRSRFYVALVNIDRFKVVNDSLGHLLGDEVLRRVAERLRDAADTVDTVARFGGDV 839 Query: 765 FGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQ 824 F L++ F + EG V AS G+ + A ++ Sbjct: 840 FALVISHAGSRGVDFGFD-----LFAEPVRVEGHEVFVTASIGVAEYPAHGADADSLIRH 894 Query: 825 ADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRM-IKENQLMMLAHGVASPRI 883 A++A Y +K GR R+ + P+ S R ++L+ Q R +++ Q +L Sbjct: 895 AEMAMYYAKQNGRNRLEFFAPEMDIGVSYR--LNLEHQIRATLEQGQFRLLYQPQID--T 950 Query: 884 PEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVA--- 939 R L +L W ++ F + L + V E +Q A+ Sbjct: 951 KTGRVCGLEALIRWIHPTRGLLPPAAFIPVAEESGLIVEIGNWVLTEAARQRAEWHKRGL 1010 Query: 940 SKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQK 995 + +++++ +S T++ LL+ L L L + +++ E + Sbjct: 1011 ADDLTLAVNVSPLQFKRGTVLPTLLKLQRQYGLGSGFLELEVTESMLMEGTERTIEDLTA 1070 Query: 996 LRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQR 1055 +R G RI + G LK D + +D ++ + D + T + A Sbjct: 1071 IRQLGVRIAIDDFGTGYSSLAYLKRLPIDLIKIDRAFVKDIDRDSNDAAICTTVVVLAHN 1130 Query: 1056 LGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQ 1091 LG+K A V L+ D++ G ++ Sbjct: 1131 LGVKVCAEGVEDAAQSAFLASHQCDVLQGYYFSEPL 1166 >UniRef50_B0C150 Signal transduction protein containing an EAL domain, a PAS domain, a CBS domain pair and a GGDEF domain n=2 Tax=Bacteria RepID=B0C150_ACAM1 Length = 1405 Score = 683 bits (1763), Expect = 0.0, Method: Composition-based stats. Identities = 206/818 (25%), Positives = 362/818 (44%), Gaps = 38/818 (4%) Query: 296 HISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPED 355 + ESE F+ + + + + + G + Q N+ +F G + G + + PED Sbjct: 597 ALRESEQRFQQMADCAPVLLWMSGVDKQCTFFNQQWLEFTGQTMAHELGKGWAEGIHPED 656 Query: 356 LNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDIN 415 L + + ME R +G W + + +G + +I DI Sbjct: 657 RQTSLDICKTAFDAR-EPFCMEYRLRRHDGAYRWLIDMGTPRFLPNGEFIGYIGSCVDIT 715 Query: 416 ELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKP----- 470 + K E + +I + +F +D ++ IPP I Sbjct: 716 DRKTLEDKVRSSEAQIRAVFNG---------MTDIVFVFDTETQQINAIPPSIVSPDMVE 766 Query: 471 --NWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEG 528 N + E Q + I+ ++ S+ E+++ A + Sbjct: 767 TINQTAEVLLLENEQAQAFHEHIQQAINSQETVTFEYQLPSTSIPAWYVASITPL----- 821 Query: 529 EVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMS 588 + + ++T+ K + + LFQEKE +TL SIG+AV+ D +I +N VAE+++ Sbjct: 822 SPTSAIWVAHNITDRKYMEQELFQEKELAQVTLQSIGDAVITTDAQGQIRHLNAVAEQLT 881 Query: 589 GWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAI---EQDVVLHCRSGGSYDVH 645 GW+ EA G P+ V + + + I E +L + G Y + Sbjct: 882 GWSCFEAQGHPIHEVFQVVDETTRRPDIQLIDSVLMTGEIAISEHQALLIAQDGQEYAID 941 Query: 646 YSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQ 705 +S P+ + + +G V+V +DV++SR++ +Q+++ ASHD+LT L NR FE+ L+ LQ Sbjct: 942 HSAAPIRDRNTTILGIVVVFRDVSQSRQLSQQMTWHASHDSLTGLVNRYQFEQLLQKALQ 1001 Query: 706 TVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEF 765 + + +H L ++DLD+FK VND+ GHAAGD LL+++A L +RS+D++ARLGGDEF Sbjct: 1002 SAHRDQLQHVLCYLDLDQFKIVNDTCGHAAGDELLQQVAELFKHTIRSTDIIARLGGDEF 1061 Query: 766 GLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQA 825 GLLL C++E A+ IA ++ + + F W + +G S G+ I+ ++H + ++S A Sbjct: 1062 GLLLHQCSIERAQVIAEQLRQRLQTFRFNWNQQAFSIGLSIGLVAINYDSHNLSSLISAA 1121 Query: 826 DIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQW-RMIKENQLMMLAHGVA--SPR 882 D ACYA+K GR R+ VY+ +R + + ++EN+ + + P Sbjct: 1122 DAACYAAKARGRNRIHVYQLDDLELVQQRGTQRWSRRIKQALEENRFRLYGQAIVPADPE 1181 Query: 883 IPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQ------QAAK 936 E + L++ + +++ TF + L +DR V +F Q K Sbjct: 1182 QSEIHQCCEVLLRMVDEQDQVVSAATFIPAAERYNLMPEIDRWVISQFLVDHFNPPQMPK 1241 Query: 937 AVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH----AES 992 + + LS A + + L EQ + P + I A + + Sbjct: 1242 TGGDQPFPYMINLSGASIGDEQFLQFLQEQFQRYPHAAPQICFEITETAAISNLNQAITF 1301 Query: 993 VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGH 1052 + +L+ GC+ L G L F LK DYL +DG ++ + + ++ I Sbjct: 1302 INELKQLGCKFALDDFGSGLSSFAYLKTLPVDYLKIDGHFIEDMANDPATQAIVESINHI 1361 Query: 1053 AQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADA 1090 +G++TIA V L +G+D + G IA Sbjct: 1362 GHVMGLQTIAESVGDLSTRKQLQSMGIDYVQGYGIALP 1399 Score = 181 bits (461), Expect = 9e-44, Method: Composition-based stats. Identities = 70/394 (17%), Positives = 146/394 (37%), Gaps = 17/394 (4%) Query: 298 SESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLN 357 SE FR + + +V +G + N+A Q GY EL G + Sbjct: 474 RASEKRFRMLFNAAPDALFVVDFQGVIRRVNQAAIQQSGYKASELLGSVLKTYLSEASQA 533 Query: 358 KDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINEL 417 V +L+ +Y + ++NG + + ++V Y + DI++ Sbjct: 534 ACETYVAQLVD--QGSYHQTLEFIHKNGTPLVIDCSCNVVTDPASQEPYILMVQRDISDQ 591 Query: 418 KRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYE 477 + + ++ +R + + +W + ++++ E + + W E Sbjct: 592 VQADTALRESEQRFQQMADCAPVLLWMSGVDKQCTFFNQQWLEFTGQTMAHELG-KGWAE 650 Query: 478 CVLPEDRQHAEKVIRDSLQSRSPFKLEFRI-TVKDGIRHIRALANRVLNKEGEVERLLGI 536 + PEDRQ + + + + +R PF +E+R+ R + + GE +G Sbjct: 651 GIHPEDRQTSLDICKTAFDAREPFCMEYRLRRHDGAYRWLIDMGTPRFLPNGEFIGYIGS 710 Query: 537 NMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEAL 596 +D+T+ K L + + + ++ + + + V D +N + + E + Sbjct: 711 CVDITDRKTLEDKVRSSEAQIRAVFNGMTDIVFVFDTE--TQQINAIPPSIVSPDMVETI 768 Query: 597 GVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHY--SITPLSTL 654 VL + E+I A S+ + + L S Y SITPLS Sbjct: 769 NQT-AEVLLLENEQAQAFHEHIQQAINSQETVTFEYQLPS---TSIPAWYVASITPLS-- 822 Query: 655 DGSNIGSVLVIQDVTESRKMLRQLSYSASHDALT 688 ++ V ++T+ + M ++L +T Sbjct: 823 ---PTSAIWVAHNITDRKYMEQELFQEKELAQVT 853 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 68/397 (17%), Positives = 139/397 (35%), Gaps = 23/397 (5%) Query: 301 ETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDL 360 + FR E + IG+A V +GQ + N+ C L + ++ + + + Sbjct: 334 QERFRVMFEQAVIGIAHVDLQGQVMLANQRFCDLLQRTPAQVTHTPMNDVLQMPQVGGNW 393 Query: 361 QQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRT 420 Q+ L + ++ +E Y + G W L +SL + G P YFI ++DI++ K+ Sbjct: 394 QET--LHAQTQDSIQIEHHYRHPQGHSAWLDLTISLATTSTGAPDYFIVMVQDISDRKQA 451 Query: 421 EQVNQQ------------------LMERITLANEAGGIGIWEWELKPNIFSWDKRMFELY 462 E Q+ +R + A ++ + + I ++ + Sbjct: 452 ELERQKLNRELETRVSLGISAFRASEKRFRMLFNAAPDALFVVDFQGVIRRVNQAAIQQS 511 Query: 463 EIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANR 522 V + + E + + S + I I N Sbjct: 512 GYKASELLG-SVLKTYLSEASQAACETYVAQLVDQGSYHQTLEFIHKNGTPLVIDCSCNV 570 Query: 523 VLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNP 582 V + + +L + D+++ Q + AL + ++R D + + + TF N Sbjct: 571 VTDPASQEPYILMVQRDISDQVQADTALRESEQRFQQMADCAPVLLWMSGVDKQCTFFNQ 630 Query: 583 VAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSY 642 + +G T LG +H D ++ +A +R + L G Sbjct: 631 QWLEFTGQTMAHELGKGWAEGIHP--EDRQTSLDICKTAFDAREPFCMEYRLRRHDGAYR 688 Query: 643 DVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLS 679 + TP +G IG + D+T+ + + ++ Sbjct: 689 WLIDMGTPRFLPNGEFIGYIGSCVDITDRKTLEDKVR 725 Score = 66.4 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 23/165 (13%), Positives = 67/165 (40%), Gaps = 14/165 (8%) Query: 554 KERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGP 613 +ER + + + +D+ ++ N + T + P+ VL + G Sbjct: 334 QERFRVMFEQAVIGIAHVDLQGQVMLANQRFCDLLQRTPAQVTHTPMNDVLQMP-QVGGN 392 Query: 614 LMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRK 673 E +++ ++ +I+ + G S + +I+ +T G+ ++++QD+++ ++ Sbjct: 393 WQETLHA--QTQDSIQIEHHYRHPQGHSAWLDLTISLATTSTGAPDYFIVMVQDISDRKQ 450 Query: 674 MLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVF 718 + NR E ++ + + ++ +R ++F Sbjct: 451 AELERQKL----------NR-ELETRVSLGISAFRASEKRFRMLF 484 Score = 46.0 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 66/181 (36%), Gaps = 9/181 (4%) Query: 258 ATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMAL 317 + P Y+ S P P I + NI + + + + + + ++ + Sbjct: 809 SIPAWYVASITPLSPTSAIWVAHNITD-----RKYMEQELFQEKELAQVTLQSIGDAVIT 863 Query: 318 VGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPED---LNKDLQQVEK-LISGEINT 373 +GQ N Q G+S E +G ++ D D+Q ++ L++GEI Sbjct: 864 TDAQGQIRHLNAVAEQLTGWSCFEAQGHPIHEVFQVVDETTRRPDIQLIDSVLMTGEIAI 923 Query: 374 YSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITL 433 + ++G + + +R + T L + D+++ ++ Q +L Sbjct: 924 SEHQALLIAQDGQEYAIDHSAAPIRDRNTTILGIVVVFRDVSQSRQLSQQMTWHASHDSL 983 Query: 434 A 434 Sbjct: 984 T 984 >UniRef50_C5SCB7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SCB7_CHRVI Length = 811 Score = 683 bits (1762), Expect = 0.0, Method: Composition-based stats. Identities = 180/797 (22%), Positives = 325/797 (40%), Gaps = 26/797 (3%) Query: 305 RNAMEYSAIGMALVG-TEGQWLQTNKALCQFLGYSQEELRGLTFQQLT-WPEDLNKDLQQ 362 + ++ + LV ++ + L N+A + LG + L G + +L PEDL Sbjct: 9 QALIDELIDAVWLVDGSDQRLLAVNRAAEELLGQGRASLVGRSMSELACTPEDLF----F 64 Query: 363 VEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQ 422 E + +G +T E ++G +V L V V DG LY +A + +E + E Sbjct: 65 WEDVAAGRGDTLLSETLLRRQDGTLVTVLRRVGRVSCPDGRCLY-LACFSNQSERRAVES 123 Query: 423 VNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHI--KPNWQVWYECVL 480 ++L+ + E+ GI +L I S+++R EL+ +P + + N ++ ++ Sbjct: 124 ELEKLVAELRATLESSADGILVTDLDGAIRSFNQRFAELWRLPAALLTERNDAGIHDWMV 183 Query: 481 PEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDM 540 E R +++P LE + + G + D+ Sbjct: 184 REVLDAEGYAARLQAIAQNPL-LEASDLLTLRQGRVLERVTLPQYARGRPIGRVYAFRDI 242 Query: 541 TEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPL 600 T+ + L + ++ +A+ D +I +NP E+M+G E +G L Sbjct: 243 TQRLHDEQGL----KLAARVFEASLDAIFVTDPEFRIVAVNPAGERMTGLAGAELVGQRL 298 Query: 601 LTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIG 660 L + N L +I +A + ++ H G ++ S+ + +G Sbjct: 299 DRSLRL--WANETLDPDIRAALDRSGHWQGEIEQHHADGSTFPCLVSLMRVLDTEGLPFH 356 Query: 661 SVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFID 720 V ++D++E+ + +++ A +DALT L NR ++L ++ + R A++FID Sbjct: 357 YVGFVKDLSETVEARQRIEQLAFNDALTGLPNRLRLTERLEFSIELARRENTRFAVLFID 416 Query: 721 LDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFI 780 +DRFK +NDS GH GD +L E+A + LR D +ARLGGDEF LLL A + Sbjct: 417 IDRFKHINDSLGHVFGDRVLIEVAQRIRQCLRHVDTIARLGGDEFVLLLHRVESHGAELV 476 Query: 781 ATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRV 840 A R++ ++ F +G + S GI L ++ +++ AD A Y K GRG Sbjct: 477 ARRLLESMAQ-PFELDGLKFSLSCSIGIALYPEDGETLDDLIKNADSAMYHVKEHGRGDC 535 Query: 841 TVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SC 899 Y+ Q ER + + +++ + + + +L W Sbjct: 536 CFYQRQMNVGLLERVRIDHAMR-EALQQGHFWLAYQPQID--LVSGLVIGAEALVRWNDP 592 Query: 900 EGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK-GISISLPLSVAGLSSAT 958 + + F + AL V E +Q A A +S+S+ +S A Sbjct: 593 DLGELAPGRFIPIAEETGFIVALGGWVLREAIRQGAHWQAQGIRLSLSVNVSATQFHQAN 652 Query: 959 LVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLSQVGRDLQI 1014 ++ L + L+ + LPP L L + ++ + E ++ L G R+ + G Sbjct: 653 FIDLLAQWLDETGLPPGRLELELTESILIQNVEETLRRLENLVALGVRLAIDDFGTGYSS 712 Query: 1015 FNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTL 1074 LK L +D ++ + D + T + G A L ++ IA V + L Sbjct: 713 LAYLKRFPIHKLKIDRSFVCDIPHDESDTAIATAVIGLASVLKLRVIAEGVETDIQRQFL 772 Query: 1075 SGIGVDLIYGEVIADAQ 1091 G G + A A Sbjct: 773 LDAGCHEFQGYLCAPAL 789 Score = 67.2 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 68/469 (14%), Positives = 136/469 (28%), Gaps = 72/469 (15%) Query: 290 FRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT--- 346 RA + + R +E SA G+ + +G N+ + L Sbjct: 118 RRAVESELEKLVAELRATLESSADGILVTDLDGAIRSFNQRFAELWRLPAALLTERNDAG 177 Query: 347 FQQLTWPE--DLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTP 404 E D +++ + + R G L V+L ++ G P Sbjct: 178 IHDWMVREVLDAEGYAARLQAIAQNPL--LEASDLLTLRQGR---VLERVTLPQYARGRP 232 Query: 405 LYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI 464 + + DI + ++Q ++ EA I+ + + I + + + + Sbjct: 233 IGRVYAFRDITQRLH----DEQGLKLAARVFEASLDAIFVTDPEFRIVAVNPAGERMTGL 288 Query: 465 PPH------IKPNWQVWY-ECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRH-I 516 + + ++W E + P+ IR +L ++ E DG Sbjct: 289 AGAELVGQRLDRSLRLWANETLDPD--------IRAALDRSGHWQGEIEQHHADGSTFPC 340 Query: 517 RALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQ-----------EKERLHITLDSIG 565 RVL+ EG +G D++E + + + Q + RL L+ Sbjct: 341 LVSLMRVLDTEGLPFHYVGFVKDLSETVEARQRIEQLAFNDALTGLPNRLRLTERLEFSI 400 Query: 566 E---------AVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLME 616 E AV+ ID+ + +N + G + + L + Sbjct: 401 ELARRENTRFAVLFIDID-RFKHINDSLGHVFGDRVLIEVAQRIRQCLRHVDTIARLGGD 459 Query: 617 NIYSADTSRSAIEQDVVLHC----------RSGGSYDVHYSI-TPLSTLDGSNIGSVLVI 665 + ++V G + + SI L DG + ++ Sbjct: 460 EFVLLLHRVESHGAELVARRLLESMAQPFELDGLKFSLSCSIGIALYPEDGETLDDLIKN 519 Query: 666 QDVTESRKMLR------QLSYSASHDALTHLANRASFEKQLRILLQTVN 708 D + L R + +R LQ + Sbjct: 520 ADSAMYHVKEHGRGDCCFYQRQMNV----GLLERVRIDHAMREALQQGH 564 >UniRef50_B0UG16 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium sp. 4-46 RepID=B0UG16_METS4 Length = 990 Score = 683 bits (1762), Expect = 0.0, Method: Composition-based stats. Identities = 192/835 (22%), Positives = 349/835 (41%), Gaps = 36/835 (4%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALV-GTEGQWLQTNKALCQ---FLGYSQEEL 342 + + + ++ SE +R + + ++ ++G+ L N +G ++ E Sbjct: 135 ITDRKRAEQQVAASEARYRALADGLPQMVWVMRASDGELLYRNARFAHYYGEIGTARGER 194 Query: 343 RGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDG 402 + P+D + + + E + +E R +G W L VRH G Sbjct: 195 VERS-----HPDDAARVAAEWARC-RAEGCPFEIEVRLRRHDGVHRWHKLVKIPVRHA-G 247 Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELY 462 + F+ DI E+ + + +R+ LA EA G G+++W L L+ Sbjct: 248 ETVEFLGTALDIEEIVAGREALRVTTDRLRLAQEAAGAGLFDWSLIDGSALLSPETLRLF 307 Query: 463 EIPPH--IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGI-RHIRAL 519 +P + W + P+D R ++ + + ++EFRI + DG R I Sbjct: 308 NLPEDRATRVTQAEWAAAMHPDDLPVLAAETRRAVATGTTLRVEFRIPLPDGSDRWIMGT 367 Query: 520 ANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEK-------ERLHITLDSIGEAVVCID 572 + + +G R++GI++D+T+ K+ +A + ERL + L+S + + D Sbjct: 368 GRVMADGDGRAVRVVGISIDVTDRKRAEQARQASEAALRVSEERLALALESGSDGLWDCD 427 Query: 573 MAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSR-SAIEQD 631 + ++++ M G+ + E + + D ++ + R + E + Sbjct: 428 LTTGTSWVSDQWLTMLGYRKGELDAGYETWLRLLHPDDREAVLARVRDHLEGRTPSYECE 487 Query: 632 VVLHCRSGGSYDVHYSITPL-STLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHL 690 + + GG + + DG+ V D+T ++ ++++ A HD LT L Sbjct: 488 QRMRRKDGGWAWILERGKVVSRAPDGTARRVVGTHIDITARKEAEARVTHMARHDTLTDL 547 Query: 691 ANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSM 750 NRA F ++L L + L+ +DLD FKAVNDS GH AGDALLRE+A S+ Sbjct: 548 PNRALFRERLEQRLAEIRRHGGHCVLLALDLDAFKAVNDSLGHLAGDALLREIARRFRSV 607 Query: 751 LRSSDVLARLGGDEFGLLLPDCN-VESARFIATRIISAVNDYHFIWEGRVHRVGASAGIT 809 LR+ D +ARLGGDEF +LL +ES A R++++V + EG+ VG S GI Sbjct: 608 LRAEDTVARLGGDEFAILLGGTPRLESVMDFAERLVASVRE-PVTLEGQQVGVGVSIGIA 666 Query: 810 LIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKEN 869 + ++ A + AD A Y +K+ GR +EP A ER + LD Q ++ Sbjct: 667 IGPEHGEDADTLFRHADRALYRAKSDGRNTFRFFEPAMDRAAEERRRLELDLQL-ALRRG 725 Query: 870 QLMMLAHGVASPRIPEARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFH 928 + ++ V + + + +L W+ + F + L AL V Sbjct: 726 EFVLHYQPVLD--VASRAIVAVEALVRWNHPTRGQLGPGVFIPLAEETGLIVALGEWVLR 783 Query: 929 EFFQQAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILD 988 + A + + +++ +S + A+L + L+ + L P L L I ++ Sbjct: 784 TATRDARHLP--EHVRVAVNISAVQVRHASLGQTVRAALDAAALSPDRLELEITESVLMG 841 Query: 989 HA----ESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEM 1044 + +++ LR G + L G + L+ D L +D A++ + Sbjct: 842 DSSLVRDALSGLRELGTHLALDDFGTGYSSLSYLRQYPFDRLKVDRSFIASIP-DQGTVT 900 Query: 1045 LITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNS 1099 ++ I G LGM A V P + G + G + QPL L+ + Sbjct: 901 ILRAIVGLGTGLGMTVTAEGVETPAQFAFVEAEGCAQVQGYLTGKPQPLPDLLAT 955 Score = 65.3 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 34/255 (13%), Positives = 79/255 (30%), Gaps = 16/255 (6%) Query: 431 ITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHI---KPNWQVWYECVLPEDR-QH 486 + E G+ + + + + R+ E+ ++PP + +P++ + L D + Sbjct: 26 LPAVLETMDQGLMMIDAEGVVRVCNGRVIEMLDLPPEMMRAQPSFDQVRQYQLGRDEFRR 85 Query: 487 AEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQL 546 + K R + + I + L G V D+T+ K+ Sbjct: 86 SPKEFRQWVADTGLRPRHHVYERERPNGRILEIRTVPLPGGGAVR----TYTDITDRKRA 141 Query: 547 NEALFQEKERLHITLDSIGEAVVCID-MAMKITFMNPVAEKMSGWTQEEALGVPLLTVLH 605 + + + R D + + V + ++ + N G +G + Sbjct: 142 EQQVAASEARYRALADGLPQMVWVMRASDGELLYRNARFAHYYG-----EIGTARGERVE 196 Query: 606 ITFGDNGPLMENIYSADTSRS-AIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLV 664 + D+ + ++ + E +V L G P+ G + + Sbjct: 197 RSHPDDAARVAAEWARCRAEGCPFEIEVRLRRHDGVHRWHKLVKIPVR-HAGETVEFLGT 255 Query: 665 IQDVTESRKMLRQLS 679 D+ E L Sbjct: 256 ALDIEEIVAGREALR 270 >UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6N2_9PROT Length = 1043 Score = 681 bits (1757), Expect = 0.0, Method: Composition-based stats. Identities = 137/706 (19%), Positives = 274/706 (38%), Gaps = 38/706 (5%) Query: 414 INELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQ 473 ++++ +R+ L + GIW + N + ++ P + + Sbjct: 345 FRSIRQSRSAVAASEQRLRLILGSVSNGIWGLDKDGNTTFVNAAAADMLGYTPEELFD-K 403 Query: 474 VWYECVL---------PEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVL 524 + + P +R + + + ++ + KDG ++ + Sbjct: 404 PMHATIHHSYPDGTHYPAERCPMHATL---VDGKPRMGIDEVLWRKDGSELYVDYSSHPI 460 Query: 525 NKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVA 584 GE+E + + D++E +Q +EAL + S + ++ D +I +NP Sbjct: 461 RSHGEMEGAVVVFEDISERRQKDEAL----KLASSVYQSSNDGILVTDEKNRILDVNPAF 516 Query: 585 EKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDV 644 +++G+T E+ G + + + ++ + + ++ ++G + Sbjct: 517 TRITGYTLEDVRGKDPGIFQ--SGKHDAQFYQQMWQSILDDGHWQGEIWDLKKNGELHAK 574 Query: 645 HYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILL 704 SI+ + DGS V D+TE ++ + A+ D LT+L NR F + R + Sbjct: 575 WLSISVIRRADGSIYRHVGQFSDITEKKRKDELIWEQANFDTLTNLPNRRLFADRFRQAI 634 Query: 705 QTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDE 764 + + AL+ +DLD+FK +ND+ GH+ GD LL E+A + S +R D +AR+GGDE Sbjct: 635 SAGARSGRYGALLSLDLDQFKRLNDTFGHSMGDKLLIEVARRLTSCVREEDTVARMGGDE 694 Query: 765 FGLLLPDCNVES------ARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQA 818 F ++L E A IA +I + + + + H +S GI L ++ Sbjct: 695 FLVILNGLGSEQNEAAIRAELIAEKIRNELCR-PYQLDKTEHHSSSSIGIVLFRGHSDDP 753 Query: 819 AEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGV 878 +++ D A Y SK GR + ++ +R + + ++ + ++ Sbjct: 754 ERLLAHVDTAMYQSKAKGRNAICFFDSSMQEILEKRGQLETALRG-ALERKEFLLHYQLQ 812 Query: 879 ASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA 937 R + +L W + + + F + L + V Q A+ Sbjct: 813 MD---SSGRPIGAEALLRWNNAKLGSVSPVQFIPVAEESGLILPIGHWVLETACAQLARW 869 Query: 938 VASK---GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE--- 991 + + I++ +S A V + L+ S + P LL L + +LD Sbjct: 870 QSDPRFNRLCIAVNVSAIQFREAAFVAKVRNVLQQSGIQPWLLKLELTESLVLDDINDSI 929 Query: 992 -SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQ 1050 ++ L+ G + + G + L D L +D ++ + D ++ I Sbjct: 930 LKMEALKNLGVKFSMDDFGTGYSSLSYLSRLPLDQLKIDQSFVRDITTDQHDAAIVQTII 989 Query: 1051 GHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 A LGM+ IA V + L G G + A P++ L Sbjct: 990 SMALSLGMEVIAEGVETEEQREFLDLRGCQAYQGYLYAKPMPIEEL 1035 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 56/386 (14%), Positives = 129/386 (33%), Gaps = 15/386 (3%) Query: 267 HMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQ 326 + WL + LL +T + R R ++ SE R + + G+ + +G Sbjct: 325 LLLWLLGSVTLLTVVSLTFYFRSIRQSRSAVAASEQRLRLILGSVSNGIWGLDKDGNTTF 384 Query: 327 TNKALCQFLGYSQEELRGLTFQQLTW---PED--LNKDLQQVEKLISGEINTYSMEKRYY 381 N A LGY+ EEL P+ + + + +++ + Sbjct: 385 VNAAAADMLGYTPEELFDKPMHATIHHSYPDGTHYPAERCPMHATLVDGKPRMGIDEVLW 444 Query: 382 NRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIG 441 ++G ++ + +R + G + EDI+E ++ ++ + ++ G Sbjct: 445 RKDGSELYVDYSSHPIR-SHGEMEGAVVVFEDISERRQKDEALKLASS----VYQSSNDG 499 Query: 442 IWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPF 501 I + K I + + D Q +++ + L Sbjct: 500 ILVTDEKNRILDVNPAFTRITGYTLEDVRGKDPGIFQSGKHDAQFYQQMWQSILDDGHWQ 559 Query: 502 KLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITL 561 + + + + + +G + R +G D+TE K+ +E + ++ TL Sbjct: 560 GEIWDLKKNGELHAKWLSISVIRRADGSIYRHVGQFSDITEKKRKDELI--WEQANFDTL 617 Query: 562 DSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSA 621 ++ + D + + + +L + L+ TFG + I A Sbjct: 618 TNLPNRRLFAD---RFRQAISAGARSGRYGALLSLDLDQFKRLNDTFGHSMGDKLLIEVA 674 Query: 622 DTSRSAIEQDVVLHCRSGGSYDVHYS 647 S + ++ + G + V + Sbjct: 675 RRLTSCVREEDTVARMGGDEFLVILN 700 >UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n=2 Tax=Proteobacteria RepID=Q2W1Z2_MAGSA Length = 1510 Score = 680 bits (1756), Expect = 0.0, Method: Composition-based stats. Identities = 140/803 (17%), Positives = 293/803 (36%), Gaps = 29/803 (3%) Query: 304 FRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQV 363 F + + E + N A + G+ +L P L+ + + Sbjct: 712 FEGVYNTIDFPIMVFDPELFLKRANGAAVRTYDLPLS-ASGMHIGRLKLPAFLDNIDKSL 770 Query: 364 EKLISGEI-NTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQ 422 ++ + ++ + + V+ GTP + + D +L ++ Sbjct: 771 TAALTEQRKESFQITF-------GKRTFQVFVTPSMSMTGTPQSVVLVVVDHTDLVEAQE 823 Query: 423 VNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPE 482 ++ ER+ + + + R EL+ + + + Sbjct: 824 QIRESQERLLSIMNHSTSAVSLKDAAGRYEFINMRFEELFGLSAEEVIGKTD--QQLFSR 881 Query: 483 DRQHAEKVIRDSLQSR-SPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMT 541 D + + + S + + + ++ + + G V + + D+T Sbjct: 882 DIAQLLRSRDLEVMGQLSAIQHLEEMVFPTSKVWLDSVRFPIFDSNGVVRAVCSQSTDVT 941 Query: 542 EVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLL 601 E L D GEA+ D + I +N +++G++ +E +G Sbjct: 942 MKHHAEEQL----RLAAKVFDRAGEAITITDSSGNIITVNDSFCRITGYSHQEVIGKNPR 997 Query: 602 TVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGS 661 + G + + ++ + + + ++ ++G Y ++ + +GS + Sbjct: 998 FLQSGKHGKD--FYDAMWRSLIEQGCWQGEIFNRRKNGEIYPEWLTVNSVRDENGSVVNY 1055 Query: 662 VLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDL 721 V + D++ + R++ + A+HD LT + NR+ +L+ + + A++FIDL Sbjct: 1056 VAIFSDISAIKSSQRRIEFLATHDELTGIPNRSLLMDRLKHAVAQAKRQKTKLAVLFIDL 1115 Query: 722 DRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIA 781 D FK +NDS GH GD LL++ + +R SD LARLGGDEF +L D ++E +A Sbjct: 1116 DNFKVINDSLGHDVGDQLLKQATERLKHCVRDSDTLARLGGDEFVAVLTDVSLEKVNSVA 1175 Query: 782 TRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVT 841 RI+ + F + V AS GI++ D+ + ++ AD A Y +K GR + Sbjct: 1176 ARIVDFLGA-SFSINDKSLFVSASIGISVFPDDGQDSLTLLKHADTAMYRAKERGRNQYQ 1234 Query: 842 VYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCE 900 + + +R + + ++ M I + +L W Sbjct: 1235 FFADEMKVIALQRLTLETGLRL-ALETKSFRMCYQPQVD--IHTGEVVGAEALLRWRDPT 1291 Query: 901 GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGI--SISLPLSVAGLSSAT 958 + F L A+ VF +Q A I++ +S L A Sbjct: 1292 LGEVSPAHFIPIAESCGLIGAIGETVFTMVLEQIAYWREKGLTVPRIAINVSAHQLRDAG 1351 Query: 959 LVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQKL----RLAGCRIVLSQVGRDLQI 1014 + L++S + L+ + + A+++ + V+++ G ++ + G Sbjct: 1352 FAAKVGSWLDSSGISSELIGIELTESALMERIDMVKEMLTSFDGMGMKVSIDDFGTGYSS 1411 Query: 1015 FNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTL 1074 + LK L +D + D + I ++ LGM+ +A V + L Sbjct: 1412 LSYLKKLPIHELKIDRSFVDGIALERDDRSIAKAIIDMSRALGMRVVAEGVESEEQLGVL 1471 Query: 1075 SGIGVDLIYGEVIADAQPLDLLV 1097 G D++ G + + Sbjct: 1472 KEEGCDMVQGYLFHRPLSPEAFA 1494 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 58/143 (40%), Gaps = 1/143 (0%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 + H E + + + + + G + N + C+ GYS +E+ G + L Sbjct: 941 TMKHHAEEQLRLAAKVFDRAGEAITITDSSGNIITVNDSFCRITGYSHQEVIGKNPRFLQ 1000 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 + + + + E + E +NG++ L V+ VR +G+ + ++A Sbjct: 1001 SGKHGKDFYDAMWRSLI-EQGCWQGEIFNRRKNGEIYPEWLTVNSVRDENGSVVNYVAIF 1059 Query: 412 EDINELKRTEQVNQQLMERITLA 434 DI+ +K +++ + L L Sbjct: 1060 SDISAIKSSQRRIEFLATHDELT 1082 Score = 82.6 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 46/292 (15%), Positives = 99/292 (33%), Gaps = 10/292 (3%) Query: 261 RTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGT 320 RT+ + P + ++ + ++ I ES+ + M +S ++L Sbjct: 789 RTFQVFVTPSMSMTGTPQSVVLVVVDHTDLVEAQEQIRESQERLLSIMNHSTSAVSLKDA 848 Query: 321 EGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRY 380 G++ N + G S EE+ G T QQL + D+ + L+ + + G+++ + Sbjct: 849 AGRYEFINMRFEELFGLSAEEVIGKTDQQL-FSRDIAQLLRSRDLEVMGQLSAIQHLEEM 907 Query: 381 YNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGI 440 VW + ++G +Q D+ E+ + + + G Sbjct: 908 VFPT-SKVWLDSVRFPIFDSNGVVRAVCSQSTDVTMKHHAEEQLRLAAK----VFDRAGE 962 Query: 441 GIWEWELKPNIFSWDKRMFELYEIPPH--IKPNWQVWYECVLPEDRQHAEKVIRDSLQSR 498 I + NI + + + I N + +D + + R ++ Sbjct: 963 AITITDSSGNIITVNDSFCRITGYSHQEVIGKNPRFLQSGKHGKDFY--DAMWRSLIEQG 1020 Query: 499 SPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEAL 550 F I N V ++ G V + I D++ +K + Sbjct: 1021 CWQGEIFNRRKNGEIYPEWLTVNSVRDENGSVVNYVAIFSDISAIKSSQRRI 1072 >UniRef50_B7JWK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Cyanothece RepID=B7JWK6_CYAP8 Length = 1143 Score = 680 bits (1756), Expect = 0.0, Method: Composition-based stats. Identities = 182/826 (22%), Positives = 326/826 (39%), Gaps = 41/826 (4%) Query: 279 PANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYS 338 + + + + +SE FR + + G+ +V EG N A + S Sbjct: 328 LIYAVARDITEEKKIEIALKDSEERFRQIVTTISDGLIVVNLEGNIRFVNLAAQELFVRS 387 Query: 339 QEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVR 398 + EL L P L + ++ E ++ A + + + Sbjct: 388 ETEL-------LEHPFGLPIVVDKIT------------EICIQPSRNTLIVAEMRSAEIT 428 Query: 399 HTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRM 458 G Y I+ + +I + + Q + E+ E GIW + I + +M Sbjct: 429 WE-GEKGYLIS-LRNITDSYQANQKLAESEEKYRKIVETTNEGIWISDHHNKITFVNHQM 486 Query: 459 FELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSR-SPFKLEFRITVKDGIRHIR 517 E+ + + EK + + QS L+ R Sbjct: 487 SEILGYTVDKMMGMSL-LTFIDAAQLSLVEKSGQKTEQSLPGTHDLKLR-RQDGSELWAI 544 Query: 518 ALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKI 577 N + N EG+ LG+ D+T+ K+ +AL+ ++RL L+S+ + + D + Sbjct: 545 VSTNALFNPEGDYMGTLGLITDITKRKRTEQALYDSEKRLEGILNSLQDVIWSADPKTRQ 604 Query: 578 -TFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHC 636 ++NP + + G E+ P L + + ++ L+ + + + E + Sbjct: 605 SLYLNPAIQLVYGRPMEDFFRDPHLWLCMV-HPEDQELVSHHLKLLEDKGSTEVHYRIIR 663 Query: 637 RSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASF 696 G + +H + G ++ + D+TE ++ QL Y+A+HD LT L NR F Sbjct: 664 PDGETRWLHSRSRLVYDEQGKSLRIDGINSDITERKQAEEQLQYNATHDTLTQLPNRLLF 723 Query: 697 EKQLRILLQTVNSTHQR-HALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSD 755 +L L+ A++F+DLD FK +NDS GHA GD LLRE+A + LR+ D Sbjct: 724 MDRLEHALERRRRYSDPLFAVLFLDLDEFKVINDSLGHALGDELLREIARRLQKSLRADD 783 Query: 756 VLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDN 814 LARLGGDEF +LL + +V+ A IA RI + F EG+ S GI L + Sbjct: 784 TLARLGGDEFTILLEEIHDVKDAIKIAERIHKDLTR-PFNLEGQEIFTNTSIGIALSNGE 842 Query: 815 NHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMML 874 A+E++ AD A Y +K GG+ +++ Q A+ R + D + R I+ + ++ Sbjct: 843 YEAASEILRDADTAMYRAKAGGKACYAIFDQQMHASAVSRLQLETDLR-RAIERQEFLVY 901 Query: 875 AHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQ 933 + S + +L W + ++ F + L + + + QQ Sbjct: 902 YQPIISLQHDT--LTGFEALIRWQHPQQGLVPPARFIPIAEETGLIVPIGEWILEQAAQQ 959 Query: 934 AAKAVAS----KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH 989 + + +S+ LS L A+L+ + L + + L + I ++++ Sbjct: 960 LKIWQTQYRNYESLKMSVNLSSKQLRDASLLGTIDRILSKTEIDNNALKVEITESILMEN 1019 Query: 990 ----AESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEML 1045 A+ + LR I L G + L + L +D ++ N + + Sbjct: 1020 VQVAADVLIALRERNIEICLDDFGTGYSSLSYLHRFPVNTLKIDRSFVMRMRPNDENSEI 1079 Query: 1046 ITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQ 1091 + I A LGM+ IA + L + L IG + G A Sbjct: 1080 VRAIVSLAHILGMEIIAEGIETELQLAQLKWIGCEQGQGYFFAKPL 1125 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 68/306 (22%), Positives = 137/306 (44%), Gaps = 11/306 (3%) Query: 295 KHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPE 354 + + HF+N + + +ALV +G+++Q N+A C +GY+ +EL L ++T PE Sbjct: 102 QELKRVNPHFQNIFNQAKVAIALVNLQGKFVQVNQAFCDLIGYTSQELIKLQLSKITHPE 161 Query: 355 DLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDI 414 + D Q + +L+ +S EKRY ++G ++W + VS+++ P YFI I I Sbjct: 162 ERLSDSQWLNQLLKNSCEAFSREKRYVKKDGSIIWGQVTVSVMKDQAKKPQYFIVIINAI 221 Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQV 474 ++ + TE+ + G + L + + Q Sbjct: 222 SDRQETERHRDRFFVMSLDLLCIAGFDGYFKTL-------NPVFERILGYSSRELL-AQP 273 Query: 475 WYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLL 534 + E + P+DR + + + Q + E R +DG + + +E + + Sbjct: 274 FIEFIHPDDRSTSLAELANLRQGKETIHFENRYRCRDGSYRWLSWTSAPYMEE---KLIY 330 Query: 535 GINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEE 594 + D+TE K++ AL +ER + +I + ++ +++ I F+N A+++ ++ E Sbjct: 331 AVARDITEEKKIEIALKDSEERFRQIVTTISDGLIVVNLEGNIRFVNLAAQELFVRSETE 390 Query: 595 ALGVPL 600 L P Sbjct: 391 LLEHPF 396 Score = 97.3 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 38/268 (14%), Positives = 90/268 (33%), Gaps = 16/268 (5%) Query: 413 DINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNW 472 ++ + Q +++ + I L+ ++ +L Sbjct: 93 RRMNIQPSHQELKRVNPHFQNIFNQAKVAIALVNLQGKFVQVNQAFCDLIGYTSQELIKL 152 Query: 473 QVWYECVLPEDRQHAEKVIRDSLQ-SRSPFKLEFRITVKDGIRHI-RALANRVLNKEGEV 530 Q+ + PE+R + + L+ S F E R KDG + + + ++ + Sbjct: 153 QL-SKITHPEERLSDSQWLNQLLKNSCEAFSREKRYVKKDGSIIWGQVTVSVMKDQAKKP 211 Query: 531 ERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGW 590 + + I +++ ++ + + + +NPV E++ G+ Sbjct: 212 QYFIVIINAISDRQETERHRDR-------FFVMSLDLLCIAGFDGYFKTLNPVFERILGY 264 Query: 591 TQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITP 650 + E L P + +H D + + + + I + CR G + ++ P Sbjct: 265 SSRELLAQPFIEFIHPD--DRSTSLAELANLRQGKETIHFENRYRCRDGSYRWLSWTSAP 322 Query: 651 LSTLDGSNIGSVLVIQDVTESRKMLRQL 678 V +D+TE +K+ L Sbjct: 323 YMEEK----LIYAVARDITEEKKIEIAL 346 >UniRef50_Q47HF3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q47HF3_DECAR Length = 994 Score = 680 bits (1755), Expect = 0.0, Method: Composition-based stats. Identities = 146/694 (21%), Positives = 270/694 (38%), Gaps = 22/694 (3%) Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQV 474 E++R N QL +TLA E G GIWE + N W + + ++ + + Sbjct: 158 QEVERRIAENTQLDRHLTLALERSGFGIWEHDPVRNRNRWSEGLRQMLGYEQEPEQLAES 217 Query: 475 WYECVLPEDRQHAEKVIRDSLQSRSPFKL-EFRITVKDGIRHIRALANRV--LNKEGEVE 531 + PEDR E + SL+ R+ + EFRI DG R+ ++ G+ Sbjct: 218 -MNLIHPEDRPAVEAQVTASLRDRNSILIGEFRIRHHDGGWRWVESRGRIVEFDEAGQPT 276 Query: 532 RLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWT 591 ++G +D+TE K + IGE + D I +N ++G+ Sbjct: 277 LMIGTMLDITERKLAEAEH----RLADLVFTGIGEGICITDAKRNILRINDAFSTITGYQ 332 Query: 592 QEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPL 651 +E +G + + + I+ + ++ + G SI+ L Sbjct: 333 ADEIVGQNPRLLK--SGVHSPAFYAEIWKTIDQYGNWQGEITNRHKDGSLVTEWLSISSL 390 Query: 652 STLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTH 711 G+ + + D++E + ++ Y +S+D LT L NR F+ +L L T Sbjct: 391 RDTTGTASHYIGIFSDLSERQAAAERIQYLSSYDTLTELPNRHLFDDRLNQALLTARRFE 450 Query: 712 QRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD 771 + AL+ +DL+RF+ +ND+ G AGD +L E+ + +R D + R G+EFG ++ + Sbjct: 451 RGTALILLDLNRFRLINDTLGPPAGDEILVEVTRRLKLQVREGDTVGRRAGNEFGFVMAN 510 Query: 772 CNVE-SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACY 830 + E A +A R++ A++ F G+ + AS GI++ N ++ AD A Sbjct: 511 LSHERDALALAQRMLDAIS-VPFSVAGQSVAITASIGISVFPKNGENGEAMLRSADAALL 569 Query: 831 ASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLW 890 +K GR + Y P+ A + R ++ + + ++ + S + + Sbjct: 570 RAKQSGRNTFSFYSPEMDADAARRLSIESALR-DALARDEFCVHYQPQVS--LDSGHMIG 626 Query: 891 LISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK--GISISL 947 + +L W+ I F + L + V Q + + +++ Sbjct: 627 MEALLRWNSALLGPISPVEFIPIAEETGLIMQIGDWVLRTACHQTKAWLDLGLLPLHVAV 686 Query: 948 PLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESV----QKLRLAGCRI 1003 LS A L + L S LP L L I A +D + KL+ G ++ Sbjct: 687 NLSPRQFRQADLPAQVAHALAESGLPAGALELEITESAFIDDIDDAVAMCSKLKSLGIKL 746 Query: 1004 VLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAG 1063 L G + D + +D ++ N ++ + + + L + +A Sbjct: 747 SLDDFGTGYSSLAYVSRFPFDKIKIDQSFVRDIVNNPVNAAIASAAIVMGRSLNLSVLAE 806 Query: 1064 PVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 V L D I G + + P + Sbjct: 807 GVETEAQAAFLRSRRCDAIQGYLFSRPLPPEEFA 840 Score = 92.6 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 56/280 (20%), Positives = 93/280 (33%), Gaps = 13/280 (4%) Query: 277 LLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLG 336 L AN + ++ + H A+E S G+ + ++ L Q LG Sbjct: 147 WLLANQKAWLEQEVERRIAENTQLDRHLTLALERSGFGIWEHDPVRNRNRWSEGLRQMLG 206 Query: 337 YSQE-ELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVS 395 Y QE E + L PED QV + + E R + +G W Sbjct: 207 YEQEPEQLAESM-NLIHPEDRPAVEAQVTASLRDRNSILIGEFRIRHHDGGWRWVESRGR 265 Query: 396 LV-RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSW 454 +V G P I + DI E K E ++ L G GI + K NI Sbjct: 266 IVEFDEAGQPTLMIGTMLDITERKLAEAEHRLAD----LVFTGIGEGICITDAKRNILRI 321 Query: 455 DKRMFELYEI--PPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG 512 + + + N ++ V I ++ ++ E KDG Sbjct: 322 NDAFSTITGYQADEIVGQNPRLLKSGVHS---PAFYAEIWKTIDQYGNWQGEITNRHKDG 378 Query: 513 IRHIRALA-NRVLNKEGEVERLLGINMDMTEVKQLNEALF 551 L+ + + + G +GI D++E + E + Sbjct: 379 SLVTEWLSISSLRDTTGTASHYIGIFSDLSERQAAAERIQ 418 Score = 80.7 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 56/312 (17%), Positives = 112/312 (35%), Gaps = 15/312 (4%) Query: 279 PANIMTMVMYAFRAERKHISESETHFRNA-MEYSAIGMALVGTEGQWLQTNKALCQFLGY 337 M+ + ++E+E + G+ + + L+ N A GY Sbjct: 272 AGQPTLMIGTMLDITERKLAEAEHRLADLVFTGIGEGICITDAKRNILRINDAFSTITGY 331 Query: 338 SQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLV 397 +E+ G + L ++ K I + + E +++G +V L++S + Sbjct: 332 QADEIVGQNPRLLKSGVHSPAFYAEIWKTID-QYGNWQGEITNRHKDGSLVTEWLSISSL 390 Query: 398 RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKR 457 R T GT ++I D++E + + Q L TL E +++ L + + +R Sbjct: 391 RDTTGTASHYIGIFSDLSERQAAAERIQYLSSYDTLT-ELPNRHLFDDRLNQALLTA-RR 448 Query: 458 MFELYEIPPHIKPNWQVWYECVLPE--DRQHAEKVIRDSLQSRSPFKL------EFRITV 509 + +++ + + P D E R LQ R + EF + Sbjct: 449 FERGTALILLDLNRFRLINDTLGPPAGDEILVEVTRRLKLQVREGDTVGRRAGNEFGFVM 508 Query: 510 KD--GIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEA 567 + R ALA R+L+ + G ++ +T + E L S A Sbjct: 509 ANLSHERDALALAQRMLDAISVPFSVAGQSVAITAS-IGISVFPKNGENGEAMLRSADAA 567 Query: 568 VVCIDMAMKITF 579 ++ + + TF Sbjct: 568 LLRAKQSGRNTF 579 >UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L724_9DELT Length = 827 Score = 680 bits (1755), Expect = 0.0, Method: Composition-based stats. Identities = 175/809 (21%), Positives = 317/809 (39%), Gaps = 34/809 (4%) Query: 304 FRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWP-------EDL 356 FR S L +G L N A G E+ GL +++ P D Sbjct: 17 FRRVFLCSPNAALLRDADGTVLAANAAFEALFGVEIPEVVGLDLREVLRPVSSRPGRADR 76 Query: 357 NKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINE 416 + +V L + E R+ GD ++ V P+ + DI Sbjct: 77 PDEDGEVWSL---RGAAFLRETRWAAGEGDAADVRVSQFPVGMLGDRPITCM-LFRDIAS 132 Query: 417 LKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP--HIKPNWQV 474 E + + E GI++ ++ + +Y ++ ++ Sbjct: 133 RLLAEDRLRDAERKYRSIFENAVEGIFQTTPAGRYLEVNRTLARIYGFESVAEMREFFRD 192 Query: 475 WYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD-GIRHIRALANRVLNKEGEVERL 533 + + R+ + +R+ E I KD + I A V +G Sbjct: 193 IRNQLYVDPRRR-DDFVRELAAHDQVRDFESEIRKKDGTVIWISENARVVRGADGLPAYY 251 Query: 534 LGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQE 593 G +D+T+ K+ AL ++ + +A+ IDM I N E + G+ Sbjct: 252 EGTVVDITDRKRAEAALATQRAYFTQLFANSPQAIALIDMHRNIVDANKAFEALFGYRTA 311 Query: 594 EALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLST 653 + G + + + EN+ A + + ++ V G V P+ Sbjct: 312 DIQGFGMRAFIVPEHLLSE--CENMRCAVLAGKPVVRETVRRHCDGRLIPVSMIGFPI-E 368 Query: 654 LDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTH-Q 712 + G G V + QD++E + Q+++ A HDALT L NR+ F +L L Sbjct: 369 IAGETQGIVYIYQDISERKAFEEQITHQAFHDALTGLPNRSLFADRLERALTRARRRGDS 428 Query: 713 RHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC 772 ++A++ IDL++FK VND+ GH AGD LL E+A + +RS D +ARLGGDEF ++L + Sbjct: 429 QYAVLMIDLNKFKGVNDTLGHQAGDQLLVEVARRLSGCVRSMDTVARLGGDEFAVILEEF 488 Query: 773 -NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYA 831 + + RI + F+ G+ AS GI L + A +++ ADIA Y Sbjct: 489 KTKKEVMTVVERIGVGLGK-PFVLCGKTVTPEASIGIVLHTRDYAAADDLLRDADIAMYR 547 Query: 832 SKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWL 891 +K GR + +++ + E ++ D + + ++ +L++ + + ++R + Sbjct: 548 AKEQGRASM-IFDRKMHQEILEAISLETDLR-QALEAGELLLHYQPIVDVK--DSRIVGF 603 Query: 892 ISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA----VASKGISIS 946 +L W + ++ F + L L R V E +Q + +S+S Sbjct: 604 EALVRWDHPDRGLVPPGQFIPLAEETGLILPLGRFVIDEACRQLRAWQLEMPEAADLSVS 663 Query: 947 LPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCR 1002 + +S LV + + L + LPP L L I ++ AE + +L+ G + Sbjct: 664 VNVSCRQFVKDGLVEHVAQVLAATGLPPACLKLEITESVLMHDAEHTARELNRLKALGVK 723 Query: 1003 IVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIA 1062 I + G + L+ D+L +D + + + ++ I A+ LG+ IA Sbjct: 724 IAIDDFGTGYSSLSYLRQLPIDHLKIDRSFISGQGCDGESQEIVKSIISLARSLGLTVIA 783 Query: 1063 GPVVLPLVMDTLSGIGVDLIYGEVIADAQ 1091 V P +D L D G + + Sbjct: 784 EGVECPDQLDRLRLADCDKAQGFMFSRPV 812 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 52/308 (16%), Positives = 111/308 (36%), Gaps = 6/308 (1%) Query: 271 LPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKA 330 + L ++ + + + ++E +R+ E + G+ G++L+ N+ Sbjct: 114 VGMLGDRPITCMLFRDIASRLLAEDRLRDAERKYRSIFENAVEGIFQTTPAGRYLEVNRT 173 Query: 331 LCQFLGY-SQEELRGLTFQQLTWPEDLN-KDLQQVEKLISGEINTYSMEKRYYNRNGDVV 388 L + G+ S E+R F+ + ++ + + ++ E ++G V+ Sbjct: 174 LARIYGFESVAEMREF-FRDIRNQLYVDPRRRDDFVRELAAHDQVRDFESEIRKKDGTVI 232 Query: 389 WALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELK 448 W +VR DG P Y+ + DI + KR E T I ++ Sbjct: 233 WISENARVVRGADGLPAYYEGTVVDITDRKRAEAALATQRAYFTQLFANSPQAIALIDMH 292 Query: 449 PNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRIT 508 NI +K L+ + ++PE + +R ++ + P E Sbjct: 293 RNIVDANKAFEALFGYRTADIQGF-GMRAFIVPEHLLSECENMRCAVLAGKPVVRETVRR 351 Query: 509 VKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAV 568 DG ++ + GE + ++ I D++E K E + + H L + Sbjct: 352 HCDGRLIPVSMIGFPIEIAGETQGIVYIYQDISERKAFEEQI--THQAFHDALTGLPNRS 409 Query: 569 VCIDMAMK 576 + D + Sbjct: 410 LFADRLER 417 >UniRef50_A3JAM8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter sp. ELB17 RepID=A3JAM8_9ALTE Length = 756 Score = 680 bits (1754), Expect = 0.0, Method: Composition-based stats. Identities = 161/755 (21%), Positives = 314/755 (41%), Gaps = 29/755 (3%) Query: 363 VEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQ 422 ++K +G +++++ Y ++G W +A + +G IA DI + KR Sbjct: 1 MQKATAGR-KSFNVDVINYTKSGTPYWVRIACDPLWDNNGQFKGCIAIETDITKEKRDAD 59 Query: 423 VNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKP--NWQVWYECVL 480 + E + A IG W L+ + +++ L H + + W Sbjct: 60 LISYNEEMLKSVINANNIGTWRLNLQSGELTINEKWAHLLGYKLHELMPTDRKTWENLTH 119 Query: 481 PEDRQHAEKVIRDSLQSRSP-FKLEFRITVKDGIRHIRALANRVLN--KEGEVERLLGIN 537 PED + + + P ++ + R+ K+G +VL+ ++G+ E L+G + Sbjct: 120 PEDLAYCISELEKHSMGQVPAYEADIRMKHKNGEWVWINTRGQVLSSTEDGKTEWLIGTH 179 Query: 538 MDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALG 597 D+ + ++ +++H ++S+ + VV I I N AE + + ++EA+G Sbjct: 180 FDINDRITAQRKSNEQSKQMHAIVESMQDGVVTISNKGVIRTFNRGAECIFEYGRDEAIG 239 Query: 598 VPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVL--HCRSGGSYDVHYSITPLSTLD 655 + + +++ D + Y + + +AI++ L + G + + +T + L Sbjct: 240 LDVNVLINTPNRDYLNKYISNYISRNTGNAIQRYHELDAINKYGTVFPIEIGMTQMPPL- 298 Query: 656 GSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHA 715 +I V++++D+T+ +K ++ A +D LT L NR + +L+ ++ + A Sbjct: 299 -GDIDFVVIVRDITQRKKREDEIRQLAYYDPLTRLPNRRLLKDRLQQVIANCGRQSRYAA 357 Query: 716 LVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE 775 L F+DLD FK +NDS G GD LL ++A+ ++ +R D ++RLGGDEF +L+ + + Sbjct: 358 LFFLDLDNFKNLNDSLGRTKGDLLLCQVAARLIESVRHGDTVSRLGGDEFVVLIEGLSSD 417 Query: 776 S------ARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIAC 829 A +I + F +G + AS G+T + N+ +++ QAD+A Sbjct: 418 RNEAAVQVEAAAGKINVQLTQ-KFDLDGSPYNGSASIGVTTFNSNDSSLEDLLKQADMAL 476 Query: 830 YASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNL 889 Y +K V ++PQ S RAAM D + +++NQ + + Sbjct: 477 YKAKAADHSSVHFFDPQMQVVASLRAAMQQD-LYEALRKNQFQLHYQKQIDQHEG---LI 532 Query: 890 WLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK---GISI 945 + +L W I F + L + V E Q A+ + ++I Sbjct: 533 GVEALLRWAHPTKGFISPAQFIPLAEETGLIVPIGEWVLREACQTLAQWASDPAKANLTI 592 Query: 946 SLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQ----KLRLAGC 1001 ++ +SV + +V+ +L L S P L L I + E+V+ +L+ G Sbjct: 593 AVNISVVQFNKKDIVHTVLNALNASGAKPHNLKLEITESLLASDVENVKVKMLELQRHGV 652 Query: 1002 RIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTI 1061 + G LK L +D ++ + D+ + + A + + I Sbjct: 653 TFSIDDFGTGYSSLFYLKQLPLHQLKIDQSFVRDIINSPNDQAIAQAVITLAIAMHLNVI 712 Query: 1062 AGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 A V L +G G + L L Sbjct: 713 AEGVETEAQRAMLQDLGCGAYQGYLFGKPCALQDL 747 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 52/274 (18%), Positives = 112/274 (40%), Gaps = 10/274 (3%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELR--- 343 + + + IS +E ++ + + IG + + L N+ LGY EL Sbjct: 51 ITKEKRDADLISYNEEMLKSVINANNIGTWRLNLQSGELTINEKWAHLLGYKLHELMPTD 110 Query: 344 GLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRH-TDG 402 T++ LT PEDL + ++EK G++ Y + R ++NG+ VW ++ DG Sbjct: 111 RKTWENLTHPEDLAYCISELEKHSMGQVPAYEADIRMKHKNGEWVWINTRGQVLSSTEDG 170 Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELY 462 + I DIN+ ++ + + +++ E+ G+ K I ++++ ++ Sbjct: 171 KTEWLIGTHFDINDRITAQRKSNEQSKQMHAIVESMQDGVVTISNKGVIRTFNRGAECIF 230 Query: 463 EIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKL----EFRITVKDGIRHIRA 518 E V + +R + K I + + + + E K G Sbjct: 231 EYGRDEAIGLDVNV-LINTPNRDYLNKYISNYISRNTGNAIQRYHELDAINKYGTVFPIE 289 Query: 519 LANRVLNKEGEVERLLGINMDMTEVKQLNEALFQ 552 + + G+++ ++ I D+T+ K+ + + Q Sbjct: 290 IGMTQMPPLGDIDFVV-IVRDITQRKKREDEIRQ 322 >UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A14_DECAR Length = 827 Score = 680 bits (1754), Expect = 0.0, Method: Composition-based stats. Identities = 163/821 (19%), Positives = 316/821 (38%), Gaps = 53/821 (6%) Query: 299 ESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEEL-RGLTFQQLTW----- 352 + + + G+++ + + N+ L E + G+ F +L Sbjct: 16 RQLAYLQAVVSNMPQGISVFDEQLRLRVWNQGFINVLNLPPEIVYEGVHFSELVRVPAQR 75 Query: 353 ----PEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFI 408 P + ++++ ++ + +S E+ NG+ + D + FI Sbjct: 76 GEYGPGEPEAHVERI-TALANKFEAHSFERT--RPNGNTHLVQ--GEPLF-IDQQLVGFI 129 Query: 409 AQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHI 468 DI + K E + ++ E+ + ++ N+ ++ L ++P + Sbjct: 130 TTYTDITDRKAAETALRTQHNQLQTVIESIPSAVSLFDSAGNLVLFNTAFPRLLDVPAEL 189 Query: 469 KP---------NWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRAL 519 + P D + + + ++ S E R +R Sbjct: 190 AKPGVSMETLFRFNAMRGEYGPGDPEKIVATLMERAKNPSHHYFE-RTRPNGKTLEVRG- 247 Query: 520 ANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITF 579 V EG + + D++E + A + ++ ++ D +I Sbjct: 248 ---VPLAEG---GFVTVYTDISERR----ASAEREQLAQKVYSHTPAGIIFTDDQHRILS 297 Query: 580 MNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSG 639 +NP +M+G+ E +G TV + D G ++ + R + ++ + ++G Sbjct: 298 INPATTEMTGYEPFELIGQ---TVFGLISLDEGISQKDFQEQISMRGSWSSELEVTQKNG 354 Query: 640 GSYDVHYSITPLSTLD-GSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEK 698 ++ I + G V ++ D+TE ++ ++ + A HDALT L NR + Sbjct: 355 SNFPAGARINRVDDPQSGLPAHYVWILADITERKQAEDRMRHIAQHDALTGLPNRLALLM 414 Query: 699 QLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLA 758 +L LL A++FIDLDRFK +ND+ GH GD +LRE+A + ++LR +D +A Sbjct: 415 RLAQLLPEARRHGWTVAVMFIDLDRFKIINDTLGHQVGDEMLREVACRLSNLLRETDFVA 474 Query: 759 RLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQ 817 RLGGDEF ++LP + A ++ +IISA++ EG S GI++ D+ Sbjct: 475 RLGGDEFVIILPSISSPADAAIVSGKIISALSTAI-EAEGHELHTSPSIGISIFPDDGPD 533 Query: 818 AAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHG 877 V+ AD A Y +K GR + +ER + + I N+L ++ Sbjct: 534 GDIVLKNADTAMYHAKAAGRNNYQFFAADMNRTAAERLNIER-KLRHAIARNELSLVFQP 592 Query: 878 VASPRIPEARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAK 936 R + + +L W +I F + + + V + A+ Sbjct: 593 --QFRAEDTTPTGVEALLRWHHPTDGMISPARFIPVAEETGMIVEIGDWVLATACHEMAR 650 Query: 937 A--VASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES-- 992 K + I++ +S L + L S LP LL L I +++++ + Sbjct: 651 WINAGLKPLRIAVNVSARQLRRRDFCETVANALTTSGLPAELLELEITESSVMENPQEAI 710 Query: 993 --VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQ 1050 +++L G + + G LK D+L +D A+++ +L D + Sbjct: 711 HILERLGRMGVTLAIDDFGTGYSSLAYLKLFPIDHLKIDRSFVADIEHDLNDRAIAFGTI 770 Query: 1051 GHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQ 1091 A LG+ IA V + L G D + G + + Sbjct: 771 ALAHSLGLNVIAEGVETEDQHELLRANGCDEVQGFLFSKPL 811 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 62/159 (38%), Gaps = 3/159 (1%) Query: 277 LLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLG 336 + A + +Y +ER+ +E E + ++ G+ + + L N A + G Sbjct: 248 VPLAEGGFVTVYTDISERRASAEREQLAQKVYSHTPAGIIFTDDQHRILSINPATTEMTG 307 Query: 337 YSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSL 396 Y EL G T L ++ E++ ++S E +NG A ++ Sbjct: 308 YEPFELIGQTVFGLISLDEGISQKDFQEQI--SMRGSWSSELEVTQKNGSNFPAGARINR 365 Query: 397 VRHTD-GTPLYFIAQIEDINELKRTEQVNQQLMERITLA 434 V G P +++ + DI E K+ E + + + L Sbjct: 366 VDDPQSGLPAHYVWILADITERKQAEDRMRHIAQHDALT 404 Score = 61.4 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 47/286 (16%), Positives = 91/286 (31%), Gaps = 36/286 (12%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELR--G 344 + +A + + +E ++L + G + N A + L EL G Sbjct: 135 ITDRKAAETALRTQHNQLQTVIESIPSAVSLFDSAGNLVLFNTAFPRLLDV-PAELAKPG 193 Query: 345 LTFQQLTW---------PEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVS 395 ++ + L P D K + + + + Y R NG + Sbjct: 194 VSMETLFRFNAMRGEYGPGDPEKIVATLMERAKNPSHHYFERTR---PNGKTLEVR---- 246 Query: 396 LVRHTDGTPL---YFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIF 452 G PL F+ DI+E + + + + GI + + I Sbjct: 247 ------GVPLAEGGFVTVYTDISER----RASAEREQLAQKVYSHTPAGIIFTDDQHRIL 296 Query: 453 SWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG 512 S + E+ P V+ L D ++K ++ + R + E +T K+G Sbjct: 297 SINPATTEMTGYEPFELIGQTVFGLISL--DEGISQKDFQEQISMRGSWSSELEVTQKNG 354 Query: 513 IRHIRALANRVLNKE--GEVERLLGINMDMTEVKQLNEALFQEKER 556 ++ G + I D+TE KQ + + + Sbjct: 355 SNFPAGARINRVDDPQSGLPAHYVWILADITERKQAEDRMRHIAQH 400 >UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT5_BREBN Length = 815 Score = 679 bits (1752), Expect = 0.0, Method: Composition-based stats. Identities = 165/807 (20%), Positives = 332/807 (41%), Gaps = 44/807 (5%) Query: 306 NAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT---FQQLTWPEDLNKDLQQ 362 +A+E S++ +++ +G N CQ +++EEL G + P + K L Sbjct: 13 SALEESSV-ISITDEKGIITYVNHNFCQLSKFNREELIGKSHNIVDSGFHPRNYFKSL-- 69 Query: 363 VEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQ 422 + + G++ + E + ++G W + + + G ++A DI + K E+ Sbjct: 70 WDTISRGKV--WKGEMKNRGKDGTEYWLSMTLVPFMNDSGFLYQYVAIGTDITKRKLMEE 127 Query: 423 VNQQLMERITLANEA--GGIGIWEWELKPNIFSWDKRMFEL--YEIPPHIKPNWQVWYEC 478 + M+ + A + + K I + + E+ YE+ + +V Sbjct: 128 SLAKTMKDLHDIKNALDESSIVAITDDKGVITYVNDKFCEISRYEVDELVGNTHRVINSR 187 Query: 479 VLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGI-RHIRALANRVLNKEGEVERLLGIN 537 + K++ ++++ +K E + KDG + L+ G + + I Sbjct: 188 YHS---KSFFKLMWETIKQGRVWKGEVKNRAKDGTEYWMNTTIVPFLDDRGVPYQYVSIR 244 Query: 538 MDMTEVKQLNEALFQE-KERLHITLDSIGEAV--VCIDMAMKITFM---NPVAEKMSGWT 591 D+T+ + AL + + T+ ++ V + D IT+ +AE++ G T Sbjct: 245 TDITDRIEAETALAEALQNDFRRTVQNLQNCVFKIVTDQRGNITYTLCEGKIAEEL-GLT 303 Query: 592 QEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPL 651 E L + + ME+ + + ++ ++ L SG Y + +++P+ Sbjct: 304 SERMLRKTSYEIFPYEVAEQ---MESYFRRAFAGESVTFELKL---SGNDYYI--TLSPI 355 Query: 652 STLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTH 711 +G + V + D+TE +K + Y A +D+LT+L NR F ++L + Sbjct: 356 -EENGEIVEMVGSMIDITERKKAEETIRYMAHYDSLTNLPNRTLFHEKLAEAMLKAKQKD 414 Query: 712 QRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD 771 ++ ++FIDLDRFK +ND+ GH+ GD LL+ +A+ ++ LR D ++RLGGDEF + L Sbjct: 415 EKIGVMFIDLDRFKNINDTLGHSIGDVLLQAVANRLICCLRKEDSVSRLGGDEFAIFLTG 474 Query: 772 CNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYA 831 A IA RII+++++ + + S GI++ D+ ++ AD A Y Sbjct: 475 VTHREAGEIAQRIITSMSESI-TLDHIEIFITPSIGISMYPDDGDDIEALLKHADAAMYL 533 Query: 832 SKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWL 891 +K G+ + + +++ + + + + + E Q + + + + + Sbjct: 534 AKEQGKNNYQFFSEELHQVLAKKLQLERELR-KALDEKQFTLHYQPKI--HLQTGQIIGM 590 Query: 892 ISLKLWSCEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQ--AAKAVASKGISISLP 948 +L W +I F + L L V QQ A + +++++ Sbjct: 591 EALIRWDHPDLGLIPPIQFIPIAEETGLIVPLGEWVMRTACQQTKAWQEAGFTQLAVAVN 650 Query: 949 LSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILD---HAESVQKLRLAGCRIVL 1005 +S+ L+ + LE + L P+ L L I L+ + +L+ G I + Sbjct: 651 ISLRQFMQNNLIEMITSILEETGLAPQYLELEITESMALNVDYTIRILNRLKALGVSISI 710 Query: 1006 SQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPV 1065 G + L D L +D N+ N ++ +I I A + + IA V Sbjct: 711 DDFGTGYSSLSYLSQFPIDRLKIDQSFLRNL--NPQNQAIIKTIIHMAHNMKIAVIAEGV 768 Query: 1066 VLPLVMDTLSGIGVDLIYGEVIADAQP 1092 +D L + + G + P Sbjct: 769 ETHEHVDFLKEQLCNEVQGYFYSKPLP 795 >UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderiales RepID=B2T9B2_BURPP Length = 1037 Score = 679 bits (1752), Expect = 0.0, Method: Composition-based stats. Identities = 155/693 (22%), Positives = 273/693 (39%), Gaps = 30/693 (4%) Query: 420 TEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIP-PHIKPNWQVWYEC 478 T+++ + + +A+ IW W + + Sbjct: 342 TKELRENEEKFRAIADCTVNWEIW-WGTDGKPRWINSAVEAYIGYTVDECMALPDFAGTV 400 Query: 479 VLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIR-HIRALANRVLNKEGEVERLLGIN 537 + P D + +LQ LEFR KDG + A + + +GE Sbjct: 401 IYPADIPRVAPEFQKALQGLRGDDLEFRCVRKDGSLMWLSASWVPITDSKGEFIGFRTSG 460 Query: 538 MDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALG 597 D+TE KQ+ L + DS+ E ++ D + I +N + +G+T EE +G Sbjct: 461 RDITERKQVEAEL----RIAAVAFDSM-EPMMITDASATILRVNSAFTECTGYTAEEIVG 515 Query: 598 VPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGS 657 + + + + ++ S + +V ++G Y +I+ + + +G+ Sbjct: 516 QTPRVLR--SGRHDDAFFQEMWEEIHSAGGWQGEVWDRRKNGEVYPKWLTISAVMSDNGT 573 Query: 658 NIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALV 717 V D+TE + ++ A DALT L NR +LR + AL+ Sbjct: 574 VSHYVGTHHDITERKIAEERIKELAFFDALTRLPNRTLLLDRLRQAITASARNEACGALL 633 Query: 718 FIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN---- 773 FIDLD FK +ND+ GH GD LL+++A + + SD +AR+GGDEF ++L + + Sbjct: 634 FIDLDHFKTLNDTLGHDKGDLLLQQVARRLADSVLESDTVARVGGDEFVVVLGNLHKNRQ 693 Query: 774 --VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYA 831 + RI++ + + +R AS G T+ + E++ QAD+A Y Sbjct: 694 EAANQTEAVGERILAVLGS-PYHLGKIEYRTSASIGATVFRGHQASIDELLKQADLAMYK 752 Query: 832 SKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWL 891 SK GR V ++P +RAA+ + I++NQ ++ ++ R Sbjct: 753 SKERGRNAVRFFDPDMQTVVVQRAALEAGLR-NAIEDNQFLLHYQA----QVVGTRVTGA 807 Query: 892 ISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKG---ISISL 947 +L W + I+ F + L AL V Q A+ A ++I++ Sbjct: 808 EALVRWQHPQRGIVPPAEFIPLAEETGLIVALGSWVLEAACAQLARWAARPDMAHLTIAV 867 Query: 948 PLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRLAGCRI 1003 +SV A V+++L + + P L L + ++D+ E + L+ G Sbjct: 868 NVSVQQFRKADFVDNVLTIIGRTGARPDRLKLELTESVLVDNVQDIIEKMSALKAKGIVF 927 Query: 1004 VLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAG 1063 L G + LK D L +D +V + D ++ I A+ LG+ IA Sbjct: 928 ALDDFGIGYSSLSYLKRLPLDQLKIDRSFVRDVLVDSNDAVIARTIVALARSLGLGVIAE 987 Query: 1064 PVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 V D L+ G G P++ Sbjct: 988 GVETEAQRDFLAAAGCYAYQGYYFCRPLPIEDF 1020 Score = 94.9 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 56/299 (18%), Positives = 108/299 (36%), Gaps = 12/299 (4%) Query: 258 ATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMAL 317 A P + + L LL L M A K + E+E FR + + Sbjct: 306 ALPIASTGTGLSLLLALLTWLMMTGRGRAMRLASAMTKELRENEEKFRAIADCTVNWEIW 365 Query: 318 VGTEGQWLQTNKALCQFLGYSQEELRGLT--FQQLTWPEDLNKDLQQVEKLISGEINTYS 375 GT+G+ N A+ ++GY+ +E L + +P D+ + + +K + G Sbjct: 366 WGTDGKPRWINSAVEAYIGYTVDECMALPDFAGTVIYPADIPRVAPEFQKALQGLRGD-D 424 Query: 376 MEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLAN 435 +E R ++G ++W + + + G + F DI E K+ + RI Sbjct: 425 LEFRCVRKDGSLMWLSASWVPITDSKGEFIGFRTSGRDITERKQV-----EAELRIAAVA 479 Query: 436 EAGGIGIWEWELKPNIFSWDKRMFELYEIP-PHIKPNWQVWYECVLPEDRQHAEKVIRDS 494 + + I + E I +D + + + Sbjct: 480 FDSMEPMMITDASATILRVNSAFTECTGYTAEEIVGQTPRVLRSGRHDD--AFFQEMWEE 537 Query: 495 LQSRSPFKLEFRITVKDGIRHIRALA-NRVLNKEGEVERLLGINMDMTEVKQLNEALFQ 552 + S ++ E K+G + + L + V++ G V +G + D+TE K E + + Sbjct: 538 IHSAGGWQGEVWDRRKNGEVYPKWLTISAVMSDNGTVSHYVGTHHDITERKIAEERIKE 596 Score = 73.8 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 35/153 (22%), Positives = 60/153 (39%), Gaps = 2/153 (1%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 ERK + E+E S M + L+ N A + GY+ EE+ G T + L Sbjct: 464 TERKQV-EAELRIAAVAFDSMEPMMITDASATILRVNSAFTECTGYTAEEIVGQTPRVLR 522 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 + Q++ + I + E +NG+V L +S V +GT +++ Sbjct: 523 SGRHDDAFFQEMWEEIHSA-GGWQGEVWDRRKNGEVYPKWLTISAVMSDNGTVSHYVGTH 581 Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWE 444 DI E K E+ ++L L + + Sbjct: 582 HDITERKIAEERIKELAFFDALTRLPNRTLLLD 614 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 50/137 (36%) Query: 546 LNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLH 605 + + L + +E+ D + K ++N E G+T +E + +P Sbjct: 341 MTKELRENEEKFRAIADCTVNWEIWWGTDGKPRWINSAVEAYIGYTVDECMALPDFAGTV 400 Query: 606 ITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVI 665 I D + A + + + G + S P++ G IG Sbjct: 401 IYPADIPRVAPEFQKALQGLRGDDLEFRCVRKDGSLMWLSASWVPITDSKGEFIGFRTSG 460 Query: 666 QDVTESRKMLRQLSYSA 682 +D+TE +++ +L +A Sbjct: 461 RDITERKQVEAELRIAA 477 >UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V1I4_9PROT Length = 935 Score = 678 bits (1751), Expect = 0.0, Method: Composition-based stats. Identities = 137/632 (21%), Positives = 256/632 (40%), Gaps = 24/632 (3%) Query: 474 VWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERL 533 W ++ +I + + LE+ + + G + L+ + + + Sbjct: 314 AWLGWLMAGRIARPISLISQAADKVAGGDLEYELPARLGEGEVAHLSTAIHDM------V 367 Query: 534 LGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQE 593 + + ++ + K+ + L + +S EA++ D I +N +++G+ + Sbjct: 368 VNLTHEIKQRKEAEQGLRLSAK----VFESNTEAIMITDAEQNIVMVNQAFTQITGYGAD 423 Query: 594 EALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLST 653 E LG + + E + A + ++ ++G + +I+ L Sbjct: 424 EVLGQRPKLL--SSGRHGPEFYEAFWHALRANDLWRGEIWNKRKNGEIFPEWVTISALRD 481 Query: 654 LDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQR 713 V V D+TE +K +++Y A++D LT L NR ++ + + + Sbjct: 482 ETSQISHYVAVFLDITERKKEEERINYLANYDVLTGLPNRYLLSDRIEQAFSSAQRNNFK 541 Query: 714 HALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN 773 A++FIDLD FK +NDS GH GDALL+ +A+ + + LR SD +ARLGGDEF LL + + Sbjct: 542 VAVLFIDLDYFKNINDSLGHDIGDALLKLVAARLKTCLRRSDTIARLGGDEFVALLSELD 601 Query: 774 -VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYAS 832 E F+A ++I ++ + F + S GI + D+ + E++ AD+A Y + Sbjct: 602 SSEEVIFVAEKMIESLTE-KFTLGEYQLSITPSIGICIYPDDGETSVELLRNADLAMYQA 660 Query: 833 KNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLI 892 K+ GR Y P ER + + I + QL + S + + + Sbjct: 661 KDDGRNNFKFYSPDMNRKALERLKLETFLRV-AIVQQQLSVYYQPKVS--VLSGKMTGME 717 Query: 893 SLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKG--ISISLPL 949 +L W E I F + L + + V + QA A + I++ L Sbjct: 718 ALLRWQHPELGFISPAVFIPIAEETGLINEIGDWVLRQSCLQARLWQAQGYDIVPIAVNL 777 Query: 950 SVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVL 1005 S L ++ L + L L L I ++ ES +++LR G R+ L Sbjct: 778 SARQLKQDNFAARVVTILREAGLDAHYLVLEITESMLMSTGESGLQILEQLRDDGVRLAL 837 Query: 1006 SQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPV 1065 G + LK D L +D ++ + D +++ A L +K A V Sbjct: 838 DDFGTGYSSLSRLKNLPLDSLKIDQSFVRDIVTDPNDASIVSATAVLAHALNLKVTAEGV 897 Query: 1066 VLPLVMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 +D + + + G + + P +V Sbjct: 898 ETQEQLDFIRMLNCEEYQGYLFSRPIPASEVV 929 Score = 79.5 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 72/214 (33%), Gaps = 17/214 (7%) Query: 237 LIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPF--LLILLPANIMTMVMYAFRA-- 292 L+ ++ + + +A P + + + L LPA + + Sbjct: 304 LVGAALGLLFAWLGWLMAGRIARPISLISQAADKVAGGDLEYELPARLGEGEVAHLSTAI 363 Query: 293 ---------ERKHISESETHFRN---AMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQE 340 E K E+E R E + + + E + N+A Q GY + Sbjct: 364 HDMVVNLTHEIKQRKEAEQGLRLSAKVFESNTEAIMITDAEQNIVMVNQAFTQITGYGAD 423 Query: 341 ELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHT 400 E+ G + L+ + + + + + E +NG++ + +S +R Sbjct: 424 EVLGQRPKLLSSGRHGPEFYEAFWHALRAN-DLWRGEIWNKRKNGEIFPEWVTISALRDE 482 Query: 401 DGTPLYFIAQIEDINELKRTEQVNQQLMERITLA 434 +++A DI E K+ E+ L L Sbjct: 483 TSQISHYVAVFLDITERKKEEERINYLANYDVLT 516 >UniRef50_B8KF61 Ggef/eal/pas/pac-domain containing protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KF61_9GAMM Length = 810 Score = 678 bits (1749), Expect = 0.0, Method: Composition-based stats. Identities = 158/770 (20%), Positives = 296/770 (38%), Gaps = 35/770 (4%) Query: 333 QFLGYSQEELRGLTFQQLTWP---EDLNKDLQQVEKLI-SGEINTYSMEKRYYNRNGDVV 388 + L +EL L+ + ED+ + +LI E ++ R +G+ Sbjct: 46 RMLQVRDDELP-LSLDTILGQVVNEDVAGFEAAMARLITEPEGKAQEVDFRADLDSGEQR 104 Query: 389 WALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELK 448 W +++ T + + D+ + +Q ++ + ++ Sbjct: 105 WFRAIGRSYANSEQTVTHAAGVLLDVTAQQSAQQYYDTFFQQPNGMHLLAS-------IE 157 Query: 449 PNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRIT 508 +I + P + + E V EDR K +++ + E R Sbjct: 158 GDIKLANSAWELALGYTPEELIG-KNFLELVHEEDRAVTVKEMQNLSKGLKTLYFENRYR 216 Query: 509 VKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAV 568 K+G + A + +++ + + D+++ A Q + + GE + Sbjct: 217 HKNGSYRVIAWSAAAADQDSII---CAVGRDISK----ENAAKQGLFQAAAVFKNSGEGI 269 Query: 569 VCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAI 628 + D I +N +++G++++EA+G + + + + ++ A Sbjct: 270 LISDEKGLIRDVNAAFSQITGYSRDEAIGQATSLLR--SGRHDAEFYKKMWHALKETGTW 327 Query: 629 EQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALT 688 ++ +SG + +I+ + DG N G V + D+T+ ++ QL A +D LT Sbjct: 328 RGEIWNRRKSGAVFPELLTISKI---DGQNSGFVAIFTDITQLKETEEQLQKLAHYDPLT 384 Query: 689 HLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLML 748 L NR ++L+ ++ +R A+ F+D+D FK +NDS GH AGD LL A+ + Sbjct: 385 ELPNRYLINERLQQSIRRAQRRSERLAVFFLDIDSFKNINDSLGHLAGDKLLAMTANRLR 444 Query: 749 SMLRSSDVLARLGGDEFGLLLPDCNVES-ARFIATRIISAVNDYHFIWEGRVHRVGASAG 807 +LR D + R+GGDEF +LL D N A IA +II A+ I EGR V AS G Sbjct: 445 ELLRDDDTVGRIGGDEFLMLLEDINSPDVATNIAEKIIGALRK-PTILEGRSVSVSASVG 503 Query: 808 ITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIK 867 I++ D+ A +MS AD A Y++K GR Y A + + + Sbjct: 504 ISIYPDDGQTAETLMSNADAAMYSAKEQGRNTFRFYSENLTRAAFQNVLIDSALR-EAKS 562 Query: 868 ENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVF 927 N+ + L + L+ + F L + + V Sbjct: 563 RNEFRLAFQPQIDIVTNSLLGL-EVLLRWHHPTLGTVSPAQFIPQAERTGLIRDIGQWVL 621 Query: 928 HEFFQQAAKAVAS--KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEA 985 + Q K +A +++ +S + V+ + + LE + PP L L + Sbjct: 622 EQACLQGNKWLAEGLPFGRLAVNVSAPQFRAEDFVDQVRQVLEYANFPPNRLELELTESV 681 Query: 986 ILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLM 1041 ++ E + +LR G + + G + LK D L LD N+ + Sbjct: 682 LVQDTEQLIGNMDELRAMGIQFAIDDFGTGYSSLSYLKKMPIDRLKLDKSFVDNISTDDN 741 Query: 1042 DEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQ 1091 D ++ + Q +G++ IA + L IG G + Sbjct: 742 DRIIAEAVVALGQAMGLEVIAEGIEYEEQARALRDIGCTQFQGFLYGMPM 791 Score = 99.2 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 80/451 (17%), Positives = 150/451 (33%), Gaps = 52/451 (11%) Query: 297 ISESETHFRNAMEYSAIGM-ALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPED 355 +S + + GM L EG N A LGY+ EEL G F +L ED Sbjct: 132 AQQSAQQYYDTFFQQPNGMHLLASIEGDIKLANSAWELALGYTPEELIGKNFLELVHEED 191 Query: 356 LNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDIN 415 +++++ L G Y E RY ++NG + + A DI+ Sbjct: 192 RAVTVKEMQNLSKGLKTLY-FENRYRHKNGSYRVIAWSAAAADQDS----IICAVGRDIS 246 Query: 416 ELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVW 475 + E +Q + + + G GI + K I + ++ Sbjct: 247 K----ENAAKQGLFQAAAVFKNSGEGILISDEKGLIRDVNAAFSQITGYSRDEAIGQATS 302 Query: 476 YECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLG 535 D + K + +L+ ++ E K G L + +G+ + Sbjct: 303 LLRSGRHDAE-FYKKMWHALKETGTWRGEIWNRRKSGAVFPELL--TISKIDGQNSGFVA 359 Query: 536 INMDMTEVKQLNEALFQ-----------EKERLHITLDSIGE---------AVVCIDMAM 575 I D+T++K+ E L + + ++ L AV +D+ Sbjct: 360 IFTDITQLKETEEQLQKLAHYDPLTELPNRYLINERLQQSIRRAQRRSERLAVFFLDID- 418 Query: 576 KITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGP-------LMENIYSADTSRSAI 628 +N ++G L +L L+E+I S D + + Sbjct: 419 SFKNINDSLGHLAGDKLLAMTANRLRELLRDDDTVGRIGGDEFLMLLEDINSPDVATNIA 478 Query: 629 EQDVVLHCR----SGGSYDVHYSI-TPLSTLDGSNIGSVLVIQDVTESRKMLR-QLSYSA 682 E+ + + G S V S+ + DG +++ D + + ++ Sbjct: 479 EKIIGALRKPTILEGRSVSVSASVGISIYPDDGQTAETLMSNADAAMYSAKEQGRNTFRF 538 Query: 683 SHDALTHLANRASFEKQL-RILLQTVNSTHQ 712 + LT RA+F+ L L+ S ++ Sbjct: 539 YSENLT----RAAFQNVLIDSALREAKSRNE 565 >UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Arthrospira RepID=B5VXY3_SPIMA Length = 1092 Score = 678 bits (1749), Expect = 0.0, Method: Composition-based stats. Identities = 166/787 (21%), Positives = 301/787 (38%), Gaps = 49/787 (6%) Query: 327 TNKALCQFLGYSQEELRGLTFQQL---TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNR 383 ++ L LG + + + F+QL EDL +Q + + N YS+ R Sbjct: 330 VSEQLYHILGLTPQP-TSINFEQLLNQIHVEDLYGWVQNYATSLFVKQN-YSLNYRIIQP 387 Query: 384 NGDVVWALLAVSLVRHTDGTPLYFIAQI------EDINELKRTEQVNQQLMERITLANEA 437 + V W + V G + I+ I E +N E ++ R+ Sbjct: 388 DSSVHWVSQESTPVSDRHGQVTHIISTIKAIENPEIVNPSITAEAALRESEARLRTIIST 447 Query: 438 GGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQS 497 G+ K + L+ P + V E Sbjct: 448 STNGLVVVNRKGRALFINPAAEALFGRPASQLEGELIGIPLVTKE--------------- 492 Query: 498 RSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERL 557 E I +DG I + ++ E E L D+T+ K+ + L + Sbjct: 493 ----STELEILRQDGQLKIVRMRVVEISWEQE-TAYLASLTDVTDFKKTEDQL----KMF 543 Query: 558 HITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMEN 617 D ++V D I ++NP E+++G+ E +G + + P + Sbjct: 544 SRACDQSPVSIVITDSEGDIQYVNPKFEEITGYKAGEVIGQNPRILKSGYTTE--PEYDV 601 Query: 618 IYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQ 677 ++ TS + ++G + H SI P+ +G + V +D+T+ + Sbjct: 602 LWRQITSGKQWSGEFHNKKKNGELFWEHASICPMRDEEGYITHFIAVKEDITQQKHNEEI 661 Query: 678 LSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGD 737 L++ A++DALT L NR +LR + H A++FIDLD FK +ND+ GH GD Sbjct: 662 LAHQANYDALTDLPNRTLIFDRLRQAITEAQVHHSNVAVMFIDLDHFKNINDTLGHELGD 721 Query: 738 ALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE-SARFIATRIISAVNDYHFIWE 796 LL+E + +R +D + RLGGDEF L++P + A +IA +++ + + F Sbjct: 722 FLLKEAGMRLRGCIRKTDTVGRLGGDEFLLIIPKLDDLVQAEYIANQVLDVLGE-PFNLC 780 Query: 797 GRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAA 856 G + AS GI + + ++ AD A YA+K GR + R Sbjct: 781 GEEAFISASIGIASYPQDGKNVSTLVRNADTAMYAAKQEGRNVFAFFTQNMNDEAQSRII 840 Query: 857 MSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSD 915 + ++ I N+L ++ + ++ + +L W + E I F + Sbjct: 841 IE-NQLRHAISRNELSVVYQPFI--HLNTSQIVGAEALMRWYNPELGNIRPDQFIAIAEE 897 Query: 916 PALSHALDRRVFHEFFQQAAKA--VASKGISISLPLSVAGLSSATLVNDLLEQLENSPLP 973 L L + + Q+ A + G+ +++ +S L + LVN ++E + N+ L Sbjct: 898 SRLIVDLGEWILSQACQEVANWHQQGNNGLWVAVNMSPRQLRTPNLVNVIIEAIANNGLS 957 Query: 974 PRLLHLIIPAEAILDHAESVQ----KLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLD 1029 L L I ++++ VQ +L R+ + G + LK L +D Sbjct: 958 SDCLELEITERSLVEEVPGVQSLIKQLNHLKIRLAIDDFGTGYSSLSYLKRFPFSVLKID 1017 Query: 1030 GELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIAD 1089 +++ + L+ + A LG+ +A + +D L G D G + + Sbjct: 1018 KSFISDLPDDQDAIALVKTMITMAHGLGLVVVAEGIETTAQLDFLCNQGCDYGQGYLFSK 1077 Query: 1090 AQPLDLL 1096 P Sbjct: 1078 PLPPAQF 1084 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 60/389 (15%), Positives = 131/389 (33%), Gaps = 49/389 (12%) Query: 307 AMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKL 366 + + + ++ E + + N+ + L + P +L L++ Sbjct: 194 ILNAINLPIFILNQEHKIIFANRKAHETL------VVNSQI-----PPELETWLRERSPQ 242 Query: 367 ISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQ 426 I+ + + + ++ W L + + DG+ IA EDI + K Q Q Sbjct: 243 IADTNISEIVAEIPITKDNITEWFCLRLYPIDSQDGSDFRAIAICEDITDSKLKAQRQQL 302 Query: 427 LMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPH-IKPNWQVWYECVLPEDRQ 485 + + G W + ++++ + + P N++ + ED Sbjct: 303 QQQHLAQVQALTKTGSWCLNMNTGEMIVSEQLYHILGLTPQPTSINFEQLLNQIHVEDLY 362 Query: 486 HAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRAL-ANRVLNKEGEVERLLGINMDMTE-- 542 + SL + + L +RI D H + + V ++ G+V ++ + Sbjct: 363 GWVQNYATSLFVKQNYSLNYRIIQPDSSVHWVSQESTPVSDRHGQVTHIISTIKAIENPE 422 Query: 543 ----VKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQE----E 594 AL + + RL + + +V ++ + F+NP AE + G E Sbjct: 423 IVNPSITAEAALRESEARLRTIISTSTNGLVVVNRKGRALFINPAAEALFGRPASQLEGE 482 Query: 595 ALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTL 654 +G+PL+T ++ + + G V + +S Sbjct: 483 LIGIPLVT------------------------KESTELEILRQDGQLKIVRMRVVEISWE 518 Query: 655 DGSNIGSVLVIQDVTESRKMLRQLSYSAS 683 + + DVT+ +K QL + Sbjct: 519 --QETAYLASLTDVTDFKKTEDQLKMFSR 545 >UniRef50_C7RN47 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RN47_9PROT Length = 1542 Score = 677 bits (1747), Expect = 0.0, Method: Composition-based stats. Identities = 163/822 (19%), Positives = 315/822 (38%), Gaps = 24/822 (2%) Query: 283 MTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEEL 342 + V + + E T + + ++ + N A + + Sbjct: 723 LATVNEELQIKTAETQELNTELESIQNSVDYPLLVLDRNASLQRFNSAAARLFKLGAAQ- 781 Query: 343 RGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDG 402 G + L P D+ L V+ + I+T + R N + L ++ + Sbjct: 782 TGRHLRDLPLPPDMPDLLADVQHV----IDTQNARDRQI-VNANRRHYALHIAPLLRDTQ 836 Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELY 462 I D L E+ ++ R+ + + + + + + Sbjct: 837 RIAGVILLFADNTSLYEVERSARETQVRLQAVMNNSVSLMAVKDAPGRYQFANPKFEQTF 896 Query: 463 EIPPHIKPNWQVWYECVLPEDR-QHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALAN 521 + PE + ++++ R + E + + G RH + Sbjct: 897 GFATGEVIGKTDL--QLFPEAVSDLFRESELEAIRLRKGIEREESLPLAAGERHFLVVRF 954 Query: 522 RVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMN 581 + + +G + L D+T K+ E L + D E V+ D +I +N Sbjct: 955 PLFDDDGAITGLCFQATDITARKRAEEQL----RLAALVFDRASEGVMVTDTEQRILTIN 1010 Query: 582 PVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGS 641 ++G+T++E +G + ++ T + ++ ++G Sbjct: 1011 DSFSTLTGYTRQEVVGKTPRLLRSDRMP--REFYAEMWDKVTRLGVWQGEIWNRRKNGEP 1068 Query: 642 YDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLR 701 Y SI + +G + V + D+T+ R+ +++ Y A+HD LT L NRA F +L Sbjct: 1069 YLEWLSINTVKDKNGKVVNYVGMFSDITKVRESQQRIEYLATHDELTGLPNRALFNDRLN 1128 Query: 702 ILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLG 761 + L + + +VFIDLD FK VND+ GH GD LL++ A +L +R+ D +ARLG Sbjct: 1129 LALAHAERSRESVGVVFIDLDNFKVVNDTLGHETGDKLLKQAAMRLLECVRAEDTVARLG 1188 Query: 762 GDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEV 821 GDEF +LL + + + A A R+++ ++ + E + AS G+++ ++ A + Sbjct: 1189 GDEFVVLLVNADRQQATLTAERLLTGLSTSYHFGEHECF-ISASIGLSMFPEDASDANSL 1247 Query: 822 MSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASP 881 M AD A Y +K+ G+ + A+ S+R A+ + R I+ +L + Sbjct: 1248 MRNADSAMYRAKDHGKNGFRFFSADLASQASKRLALETGLR-RAIENGELFVHYQP--QV 1304 Query: 882 RIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA--VA 939 R+ + +L W GE+ID F L A+D V E +Q + Sbjct: 1305 RLECDTVVGAEALVRWRYNGEVIDPVVFIPIAEQSHLIFAIDDWVLGEACRQIIEWDRAG 1364 Query: 940 SKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES---VQKL 996 + IS+ +S + DL++ + + P+ L + I ++D + + +L Sbjct: 1365 LPPLRISVNISARHFRKDGMAADLMDIVSAHGVSPQRLCIEITEGVLMDVDRAQRMLAEL 1424 Query: 997 RLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRL 1056 +G RI + G + LK L + + + D + ++I A++L Sbjct: 1425 VESGLRISIDDFGTGFSSLSYLKRFPIHELKIARSFVDGISTDADDRAIASVIISLARQL 1484 Query: 1057 GMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 GM + + L G G + A D + Sbjct: 1485 GMSVVGEGIERTGQHAELEAFGCHRGQGFLYAQPLAPDAFAD 1526 >UniRef50_Q1N2J6 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1N2J6_9GAMM Length = 1407 Score = 676 bits (1745), Expect = 0.0, Method: Composition-based stats. Identities = 159/828 (19%), Positives = 319/828 (38%), Gaps = 39/828 (4%) Query: 296 HISESETHFRNAMEYSAIGMALVGTEGQWLQTN-KALCQFLGYSQEELRGL-TFQQLTWP 353 + +SE + N ++ + + + + + + + + LGYS EEL + ++QL P Sbjct: 581 ALKDSEQFWSNVIQTLPDTVYVNDLFAKQTRFSSRHIGELLGYSSEELEEIEHWRQLIHP 640 Query: 354 EDLNKDLQQVEKLISGEINTY-SMEKRYYNRNGDVVWALLAVSLVRHTDGTP-LYFIAQI 411 +D++K + +L + R ++NG+ + P Y++ Sbjct: 641 DDVSKSDAAISQLKTMRPGEVKETTARLKHKNGNWRVIRFRDCIFSSETQVPAQYYVGMA 700 Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPN 471 DI E + + R L ++ K + + ++ Sbjct: 701 RDITEEEDAKIQLSFSERRYRLLANGISDIVFTLNKKLELSYISASINKMLGYDSDQVMR 760 Query: 472 WQVWYECVLPEDRQHAEKVIRDSLQ---SRSPFKLEFR------ITVKDGIRHIRALANR 522 + + E + + LQ S S FK + R T + ++ Sbjct: 761 EGLSLFLIT-ESVNKLIQALERDLQLALSISSFKDQVRTMDLDAQTFSGVPVILEMQSSI 819 Query: 523 VLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNP 582 + N+ G +E +L D+T+ + + E ++ EA++ I+ +N Sbjct: 820 LRNESGAIEGILATCRDVTQRRFIEHEARTASE----VFENSSEAIMMTTSTGLISRVNR 875 Query: 583 VAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSY 642 ++G+ + +GV + M++I A + ++ R G + Sbjct: 876 AFTHLTGFDGQHVIGVNPKQFIAKDVSHQT--MQDIRDALLVDGYWQGELDYINRKGEKH 933 Query: 643 DVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRI 702 +T L G +++ D+T ++ ++ + A D LT L NRA + L Sbjct: 934 PSWTGVTALKDEMGQIQSHIIISSDITHRKQTEARIQHLAYFDPLTGLPNRAQMHEALDR 993 Query: 703 LLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGG 762 L+ + AL+FIDLDRFK +ND+ GH AGD +L+E+AS + + + ++++R+GG Sbjct: 994 LMAK---EESQLALLFIDLDRFKPINDTMGHPAGDQVLKEVASRLKEAVGAKNLVSRIGG 1050 Query: 763 DEFGLL---LPDCN--VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQ 817 DEF ++ LP+ +++ ++ RI+ + FI E R + AS GI L +N Sbjct: 1051 DEFTVIMATLPETEQAIQTIIDVSERILHQMMQPFFI-EDRQLYLSASVGIALYPENALS 1109 Query: 818 AAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHG 877 +++ AD A Y +K G+ Y + ER + + ++ ++ + Sbjct: 1110 GTDLLRNADTAMYHAKAMGKNNFQFYAEEMNEKAMERLELENNLHL-ALQRDEFELTFQ- 1167 Query: 878 VASPRIPEARNLWLISLKLWS-CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAK 936 A I + +L W + ++ F + L + V +Q Sbjct: 1168 -AQWDIKHNCICGVETLLRWHRPDIGLVGPDKFIPIIEETGLIVPIGEWVLRRACEQIMD 1226 Query: 937 AVASKGI--SISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES-- 992 + + +++ LS A +++ + ++ + + P L+ L + ++D + Sbjct: 1227 WQEAGYVIPKLAVNLSARQFKDAQMLDRICRIVDETGVDPELIELELTESILMDDIDRTL 1286 Query: 993 --VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQ 1050 + + R G + + G + LK L +D N+ N D + I Sbjct: 1287 AVLNEARKMGFGLSIDDFGTGYSSLSYLKQFPVSQLKIDKSFIQNLPYNQEDGQITRTIV 1346 Query: 1051 GHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 A LG+ IA V L IG + G + + P DL Sbjct: 1347 AMANNLGLGVIAEGVENESQRQFLKTIGCYQVQGYMYSHPVPADLFAQ 1394 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 69/466 (14%), Positives = 159/466 (34%), Gaps = 58/466 (12%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVG----------TEG-------------- 322 + A R ++ S ++ + +GM V +G Sbjct: 418 VSRQAANRDLLNVSRARYQALYDGCGVGMWHVDISLVRSWLEQLDGVSVEDYLKQYPDSF 477 Query: 323 -------QWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYS 375 + N + G S ++ + L + + E + G ++S Sbjct: 478 ADLRSSYNLIDINASAVSMHGGSNKQKFIEALKDLFLSYNHELMQEMAEGIRQGA-KSFS 536 Query: 376 MEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLAN 435 E + N G L+ +L G I DIN+ + E + + + Sbjct: 537 REVAFINAKGVKNHYLVNATL--DQVGQ-DQAIVSFIDINDRIKAELALKDSEQFWSNVI 593 Query: 436 EAGGIGIWEWELKPNIFSWDKR-MFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRD- 493 + ++ +L + R + EL + W + + P+D ++ I Sbjct: 594 QTLPDTVYVNDLFAKQTRFSSRHIGELLGYSSEELEEIEHWRQLIHPDDVSKSDAAISQL 653 Query: 494 -SLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEV--ERLLGINMDMTEVKQLNEAL 550 +++ + R+ K+G + + + + E +V + +G+ D+TE + L Sbjct: 654 KTMRPGEVKETTARLKHKNGNWRVIRFRDCIFSSETQVPAQYYVGMARDITEEEDAKIQL 713 Query: 551 FQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEAL--GVPLLTVLHITF 608 + R + + I + V ++ +++++++ KM G+ ++ + G+ L + Sbjct: 714 SFSERRYRLLANGISDIVFTLNKKLELSYISASINKMLGYDSDQVMREGLSLFLITESVN 773 Query: 609 GDNGPLMENIYSADTSRSAIEQ----DVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLV 664 L ++ A + S +Q D+ SG + + L G+ G + Sbjct: 774 KLIQALERDLQLALSISSFKDQVRTMDLDAQTFSGVPVILEMQSSILRNESGAIEGILAT 833 Query: 665 IQDVTESRKMLRQLSYSA----------SHDALTHLANR--ASFEK 698 +DVT+ R + + ++ T L +R +F Sbjct: 834 CRDVTQRRFIEHEARTASEVFENSSEAIMMTTSTGLISRVNRAFTH 879 Score = 71.1 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 60/448 (13%), Positives = 150/448 (33%), Gaps = 47/448 (10%) Query: 274 LLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQ 333 +L L I+ V + + S A+ + G+ + N + Sbjct: 282 MLAYLGFKILRYVKEKNQTDLDRFSAKANRAEEALSCIEEVVITTDYRGRIIFCNPSAMT 341 Query: 334 FLGYSQ-EELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALL 392 LG + +++ G Q ++P D L++ + L+ ++ + + +G + Sbjct: 342 LLGLNDCQQVVGKPLVQ-SFPFDGLPWLEKDQNLLKNKLRIVNYGDTLVDVSGQLK--TF 398 Query: 393 AVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKP--- 449 +SL R ++ + D++ + R + G+G+W ++ Sbjct: 399 NISLYRPEKQNSCIWV--LRDVSRQAANRDLLNVSRARYQALYDGCGVGMWHVDISLVRS 456 Query: 450 ----------------------------NIFSWDKRMFELYEIPPHIKPNWQVWYECVLP 481 N+ + ++ + + + + L Sbjct: 457 WLEQLDGVSVEDYLKQYPDSFADLRSSYNLIDINASAVSMHG-GSNKQKFIEALKDLFLS 515 Query: 482 EDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMT 541 + + +++ Q F E G+++ L N L++ G+ + ++ D+ Sbjct: 516 YNHELMQEMAEGIRQGAKSFSREVAFINAKGVKN-HYLVNATLDQVGQDQAIVSFI-DIN 573 Query: 542 EVKQLNEALFQEKERLHITLDSIGEAVVCIDM-AMKITFMNPVAEKMSGWTQEEALGVPL 600 + + AL ++ + ++ + V D+ A + F + ++ G++ EE + Sbjct: 574 DRIKAELALKDSEQFWSNVIQTLPDTVYVNDLFAKQTRFSSRHIGELLGYSSEEL--EEI 631 Query: 601 LTVLHITFGDNGPLMENIYSAD-TSRSAIEQDV--VLHCRSGGSYDVHYSITPLSTLDGS 657 + D+ + S T R ++ L ++G + + S+ Sbjct: 632 EHWRQLIHPDDVSKSDAAISQLKTMRPGEVKETTARLKHKNGNWRVIRFRDCIFSSETQV 691 Query: 658 N-IGSVLVIQDVTESRKMLRQLSYSASH 684 V + +D+TE QLS+S Sbjct: 692 PAQYYVGMARDITEEEDAKIQLSFSERR 719 Score = 63.4 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 46/287 (16%), Positives = 95/287 (33%), Gaps = 14/287 (4%) Query: 279 PANIMTMVMYAFRAERKHISESETHFRN-AMEYSAIGMALVGTEGQWLQTNKALCQFLGY 337 I ++ ++ E E + E S+ + + + G + N+A G+ Sbjct: 824 SGAIEGILATCRDVTQRRFIEHEARTASEVFENSSEAIMMTTSTGLISRVNRAFTHLTGF 883 Query: 338 SQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLV 397 + + G+ +Q + ++ +Q + + + + E Y NR G+ + V+ + Sbjct: 884 DGQHVIGVNPKQFIAKDVSHQTMQDIRDALLVD-GYWQGELDYINRKGEKHPSWTGVTAL 942 Query: 398 RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKR 457 + G I DI K+TE Q L L + E L + + + Sbjct: 943 KDEMGQIQSHIIISSDITHRKQTEARIQHLAYFDPLTGLPNRAQMHE-ALDRLMAKEESQ 1001 Query: 458 MFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIR 517 + L+ KP P Q ++V ++ L RI + + Sbjct: 1002 LALLFIDLDRFKPINDTMG---HPAGDQVLKEVASRLKEAVGAKNLVSRIGGDEFTVIMA 1058 Query: 518 ALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSI 564 L E E+ + +D++E E + L + Sbjct: 1059 TLP--------ETEQAIQTIIDVSERILHQMMQPFFIEDRQLYLSAS 1097 >UniRef50_A0LD38 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD38_MAGSM Length = 834 Score = 676 bits (1745), Expect = 0.0, Method: Composition-based stats. Identities = 163/835 (19%), Positives = 289/835 (34%), Gaps = 85/835 (10%) Query: 276 ILLPANIMTMVMYAFRAER-KHISESE-THFRNAMEYSAIGMALVGTEGQWLQTNKALCQ 333 I L + R E+ K + ES F + G L+ G L+ N + Sbjct: 44 IELEIQNQELRESQLRLEKAKQVQESALARFEALFNSAPEGFILIDVSGMVLECNHTTLE 103 Query: 334 FLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLA 393 LG +E+L F ED K +E R ++ Sbjct: 104 MLGCKREDLIRKPFSAFVHIEDQPKFYASYPSFFKSTYPK-PIEIRLIHK---------- 152 Query: 394 VSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFS 453 S +H D + E G + +L +++ Sbjct: 153 GSAFKHKD-----------------------------HSFIAELTGCSTLKQDLFKDLYH 183 Query: 454 WDKR-MFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG 512 + + +Y I H ++ D + A ++ +L Sbjct: 184 DNPFILVSIYNINAHKLLEREL-------ADAKQAAELANHAL----------------- 219 Query: 513 IRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCID 572 + + L N + + E ++ EA++ D Sbjct: 220 ---LESHDKLEATVAQRTAALKTSNEQLKQQMIEREQAQHRLRLTAGVFENTSEAIIITD 276 Query: 573 MAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDV 632 A ++ +NP +++G+ +E +G + ++ + ++ Sbjct: 277 AANRVMEVNPAFVRITGYPADEVIGRDPG--FMKSHRHTHEFYAEMWKKIWQTGQWQGEI 334 Query: 633 VLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLAN 692 +G Y +I + G + + + D++ + +L A D LT L N Sbjct: 335 WDRRHNGEIYPKWLTINAVYDERGHLVNCIGIFSDISRLKATEERLEQLAFFDCLTKLPN 394 Query: 693 RASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLR 752 RA F+ +L L N + L+FIDLD FK +NDS GH AGD LL E A + S +R Sbjct: 395 RAHFQSRLDHALTAANRRQNKVGLIFIDLDHFKHINDSMGHNAGDQLLIEAAKRIQSCVR 454 Query: 753 SSDVLARLGGDEFGLLLPDCNVES--ARFIATRIISAVNDYHFIWEGRVHRVGASAGITL 810 D +AR+GGDEF ++L D + +A I+ + + + E + +G S G+ + Sbjct: 455 EEDTVARMGGDEFTIILADLTDTAKVMTNVALTILESF-THPIVLEDKKLFIGCSLGMAI 513 Query: 811 IDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQ 870 D++ AA ++ AD A Y +K GR R + Y + A R ++ + ++ I Sbjct: 514 YPDDSGNAALLIKHADTAMYRAKESGRNRYSFYTAEMNAQAQSRISLESELRY-AIDHKA 572 Query: 871 LMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHE 929 + + + +L W +I F + L A+ +V Sbjct: 573 FELYYQPKVDAH--SSEIVGFEALLRWIHPTEGVISPNQFIPIAEESGLIAAIGNQVVEM 630 Query: 930 FFQQAAK--AVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAIL 987 Q + K + +++ LSV L LVN + L N + L L + + Sbjct: 631 ACQGLQRINRCTPKPLPVAINLSVRQLRQDNLVNYFSQTLANYGIEAEQLELEVTESFLA 690 Query: 988 DHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDE 1043 E +Q L G +I + G + LK L +D V N Sbjct: 691 KPIEKSAALLQALHQLGYKIAIDDFGTGYSSLSYLKNFPIHTLKIDRSFVMEVAHNQESR 750 Query: 1044 MLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 ++ I A LG +A V ++ L G+G ++ G A PL ++ Sbjct: 751 TIVQAIISMAHALGYDLVAEGVETAAQVNVLQGLGCGIMQGFHYARPAPLHEILE 805 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 66/204 (32%), Gaps = 21/204 (10%) Query: 523 VLNKEGEVERLLGINMDMTEVKQLNEALFQEKE----RLHITLDSIGEAVVCIDMAMKIT 578 + + L N ++ E + E Q +E R +S E + ID++ + Sbjct: 36 IHDLNVHQIELEIQNQELRESQLRLEKAKQVQESALARFEALFNSAPEGFILIDVSGMVL 95 Query: 579 FMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCR- 637 N +M G +E+ + P +HI D + S S ++ L + Sbjct: 96 ECNHTTLEMLGCKREDLIRKPFSAFVHI--EDQPKFYASYPSFFKSTYPKPIEIRLIHKG 153 Query: 638 -----SGGSYDVHYSITP------LSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDA 686 S+ + L N ++ I ++ + + R+L A Sbjct: 154 SAFKHKDHSFIAELTGCSTLKQDLFKDLYHDNPFILVSIYNINAHKLLEREL---ADAKQ 210 Query: 687 LTHLANRASFEKQLRILLQTVNST 710 LAN A E ++ T Sbjct: 211 AAELANHALLESHDKLEATVAQRT 234 >UniRef50_B9ZNS8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZNS8_9GAMM Length = 944 Score = 676 bits (1744), Expect = 0.0, Method: Composition-based stats. Identities = 153/697 (21%), Positives = 271/697 (38%), Gaps = 23/697 (3%) Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKR-MFELYEIPPHIKPNWQ 473 + L + Q + + R+ +WE + + + + +L P + Sbjct: 237 STLLQQNQQLNRSVARLESMLGGANAILWESNPESHEWEFVAGDTRKLLGFPSRNLGRGE 296 Query: 474 VWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERL 533 + + P+D + P +++R ++G G L Sbjct: 297 LRARHIHPDDLPRVREA--AHAAGNEPQVVDYRFAHRNGQWIWLRDILSSAEDPGSRRSL 354 Query: 534 LGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQE 593 G+ +D+T ++ AL + + R ++ I E + D + T +NP E ++G+ E Sbjct: 355 RGLTLDVTAHRRAAAALKESENRYQDVVNHISEVIFRTDAEGRWTLLNPAWEALTGFKVE 414 Query: 594 EALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLST 653 E LG P+ + D+ + + + E ++ L G V + Sbjct: 415 ETLGQPMCAFVDPEDRDDAQSFCSTLLEGGTHAQSE-EIRLRTHDGSHRWVSIYASARFD 473 Query: 654 LDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQR 713 DG + + + D+++ ++ ++ A D LT L NR +L L T Sbjct: 474 EDGHIMATFGTMMDISDRKEAEEEIRRLAFFDGLTGLPNRTLLHDRLGQALANTARTRHH 533 Query: 714 HALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN 773 A++FIDLD FK +ND+ GHA GD LL ++A M + +R +D LARLGGDEF ++L D + Sbjct: 534 GAVLFIDLDNFKDINDTLGHAVGDDLLCQVARRMENSVREADTLARLGGDEFVIILNDLH 593 Query: 774 VE------SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADI 827 + A + ++I+ + + F G+ V S G TL + EV+ QAD+ Sbjct: 594 PDPARAATEAEAVGRKLINLLRE-PFQLAGQNRHVTPSIGATLFSGRSLGVEEVLKQADL 652 Query: 828 ACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEAR 887 A Y +KN GR V Y+P+ A R + +E + E++ ++ E R Sbjct: 653 AMYRAKNAGRNTVRFYDPELHRAVEARFELE-NELRHALDEDRFSVVYQPQVD---AEGR 708 Query: 888 NLWLISLKLWSC-EGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV---ASKGI 943 + L W + I F L + R+V Q A + + Sbjct: 709 VIGAELLLRWEHAQRGAISPAEFIPVAEQTGLIVPIGRKVLRTACAQLGAWQHTAAFRDL 768 Query: 944 SISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLA 999 ++S+ +S V L E L+ + P L L + +L+ ++ + +LR Sbjct: 769 TLSVNISARQFRDPHFVPHLREILQETGAPGDRLKLELTESMLLEEIDTVVAHIDELRAL 828 Query: 1000 GCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMK 1059 G L G LK L +D +V + D + ++ A+ L + Sbjct: 829 GVEFALDDFGTGYSSLAYLKQLPLAQLKIDQSFVRDVLDDPNDAAIAQMVVNLARTLDLD 888 Query: 1060 TIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 IA V L G+G G + L L Sbjct: 889 VIAEGVETVEQRAFLFGLGCRHFQGFLYGYPGDLADL 925 Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 58/152 (38%) Query: 279 PANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYS 338 +T+ + A R + ESE +++ + + + + EG+W N A G+ Sbjct: 353 SLRGLTLDVTAHRRAAAALKESENRYQDVVNHISEVIFRTDAEGRWTLLNPAWEALTGFK 412 Query: 339 QEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVR 398 EE G PED + L+ G + S E R +G W + S Sbjct: 413 VEETLGQPMCAFVDPEDRDDAQSFCSTLLEGGTHAQSEEIRLRTHDGSHRWVSIYASARF 472 Query: 399 HTDGTPLYFIAQIEDINELKRTEQVNQQLMER 430 DG + + DI++ K E+ ++L Sbjct: 473 DEDGHIMATFGTMMDISDRKEAEEEIRRLAFF 504 Score = 89.2 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 42/269 (15%), Positives = 88/269 (32%), Gaps = 17/269 (6%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQ-WLQTNKALCQFLGYS-----QEELRGL 345 + + ++ S + + + + E W + LG+ + ELR Sbjct: 241 QQNQQLNRSVARLESMLGGANAILWESNPESHEWEFVAGDTRKLLGFPSRNLGRGELRAR 300 Query: 346 TFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPL 405 P+DL + + +G ++ R+ +RNG +W +S G+ Sbjct: 301 H----IHPDDLPRVRE--AAHAAGNEPQV-VDYRFAHRNGQWIWLRDILSSAEDP-GSRR 352 Query: 406 YFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIP 465 D+ +R ++ R I+ + + + L Sbjct: 353 SLRGLTLDVTAHRRAAAALKESENRYQDVVNHISEVIFRTDAEGRWTLLNPAWEALTGFK 412 Query: 466 PHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSP-FKLEFRIT-VKDGIRHIRALANRV 523 Q V PEDR A+ L+ + E R+ R + A+ Sbjct: 413 VEETLG-QPMCAFVDPEDRDDAQSFCSTLLEGGTHAQSEEIRLRTHDGSHRWVSIYASAR 471 Query: 524 LNKEGEVERLLGINMDMTEVKQLNEALFQ 552 +++G + G MD+++ K+ E + + Sbjct: 472 FDEDGHIMATFGTMMDISDRKEAEEEIRR 500 >UniRef50_Q4C8S6 PAS:GGDEF n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4C8S6_CROWT Length = 906 Score = 675 bits (1742), Expect = 0.0, Method: Composition-based stats. Identities = 168/840 (20%), Positives = 331/840 (39%), Gaps = 36/840 (4%) Query: 283 MTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEEL 342 ++ V+ + + ++ E H+ A+++S G + + ++ + + G Sbjct: 84 LSQVLAELHSTQATLNSRENHYAQALKFSQTGSWEFDVVTEKVFWSEEVERIWGMEPGTF 143 Query: 343 RG--LTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHT 400 RG Q PED+ + V+ + + +E R + + + W S + Sbjct: 144 RGELQQVQGAIHPEDVEHWQKNVQDCRE-KGKEHRIEYRIIHPDASIHWVQALGSAEKDD 202 Query: 401 DGTPLYFIAQIEDINELKR-------TEQVNQQLMERITLANEAGGIGIWEWELKPNIFS 453 G + + + DI E K+ TE ++ + + +W + Sbjct: 203 QGNVIRLLGIVMDITERKQLELEHKETEMALRESEALFRNMADHAPVMVWVTDETGYSTY 262 Query: 454 WDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGI 513 + ++ + W + + P++R+ A K + + R PF +++R +DG+ Sbjct: 263 VSQSWYDFSGQKEGTALGF-GWLDVIHPDERELARKRFLEFNEKRQPFSIDYRFRRRDGV 321 Query: 514 RHI-RALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCID 572 + +G+ + +G MD+++ K++ E L + + + + ID Sbjct: 322 YCWGIDAGKPRFSADGQFKGYIGSVMDISDRKRMEEQL----RIFECIVATTQDMMALID 377 Query: 573 MAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDN-GPLMENIYSADTSRSAIEQD 631 +N + +EE +G ++ ++ F D P ++ + R D Sbjct: 378 QNYTYQIVNDAYARNFQRAKEEIIGKSVVEIVGEEFMDTIQPHLDRCLQGEEVRYETWFD 437 Query: 632 VVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLA 691 + H +P + +V+ I D+T+ ++ ++L Y A HD LT+L Sbjct: 438 L-----GEEQRYYHALYSPYREANKGVTSAVVNIHDITQIKESEQKLYYQAHHDTLTNLP 492 Query: 692 NRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSML 751 NR +L +Q + A+VFIDLDRFK +NDS GH AGD+LL +LA + Sbjct: 493 NRMLMNTRLEQSIQQATRKGDKLAVVFIDLDRFKNINDSLGHRAGDSLLEQLAQRLCQQR 552 Query: 752 RSSDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITL 810 R SD +AR+ GDEF ++L D + + A + +++ + FI EGR ++ +S G++L Sbjct: 553 RKSDTVARISGDEFVVILEDIKDTQHAGMVVGKLMRTFEE-PFIIEGRTIKMTSSMGLSL 611 Query: 811 IDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQ 870 D+ A ++ AD A Y +K GR Y + + E + + +K+ + Sbjct: 612 FPDDGTDVATLLRNADAAMYRAKEDGRNTYCFYRKEMTSTVFEYMLLE-NALREALKKKE 670 Query: 871 LMMLAHGVASPRIPEARNLWLISLKLWS-CEGEIIDEQTFRRSFSDPALSHALDRRVFHE 929 +L + R L + +L W E ++ F L + V Sbjct: 671 FYLLYQP--QIEMLSHRCLGIEALLRWHHPELGVVSPAQFIPIAEQSGLIQEIGTWVLTT 728 Query: 930 FFQQAAKAVASKG--ISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAIL 987 +QA + K I++ ++ + + + L+ + LP L L + ++ Sbjct: 729 ACRQAKIWLEQKLDFGRIAVNVAAPQIQHGDFIQVVENVLKTTGLPAAYLELELTEGLLM 788 Query: 988 DHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDE 1043 E ++KL+ G ++ + G N LK D L +D ++ + D Sbjct: 789 KQTEQNIKQLEKLQGMGIKLTIDDFGIGYSSLNYLKRLPIDKLKIDQSFIRDLPHDTNDT 848 Query: 1044 MLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNSSYFA 1103 + + L ++ IA V L G G + P + S+ FA Sbjct: 849 AISQAVIALGYALNLQIIAEGVENEEQAAFLKEKGCHQAQGYFFSQPIPPQQV--SALFA 906 Score = 113 bits (284), Expect = 4e-23, Method: Composition-based stats. Identities = 53/358 (14%), Positives = 122/358 (34%), Gaps = 28/358 (7%) Query: 271 LPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKA 330 + L I++ + + + ESE FRN +++ + + + G +++ Sbjct: 207 IRLLGIVMDITERKQLELEHKETEMALRESEALFRNMADHAPVMVWVTDETGYSTYVSQS 266 Query: 331 LCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWA 390 F G + G + + P++ ++ + + +S++ R+ R+G W Sbjct: 267 WYDFSGQKEGTALGFGWLDVIHPDERELARKRFLEFNE-KRQPFSIDYRFRRRDGVYCWG 325 Query: 391 LLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPN 450 + A DG +I + DI++ KR E+ + + + + + + Sbjct: 326 IDAGKPRFSADGQFKGYIGSVMDISDRKRMEEQLRIFECIVATTQDMMALIDQNYTYQ-- 383 Query: 451 IFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVK 510 + ++ V E V E + + LQ + E + Sbjct: 384 --IVNDAYARNFQRAKEEIIGKSV-VEIVGEEFMDTIQPHLDRCLQGEE-VRYETWFDLG 439 Query: 511 DGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKER-----------LHI 559 + R+ AL + V + D+T++K+ + L+ + ++ Sbjct: 440 EEQRYYHALYSPYREANKGVTSAVVNIHDITQIKESEQKLYYQAHHDTLTNLPNRMLMNT 499 Query: 560 TLDSIGE---------AVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITF 608 L+ + AVV ID+ + +N +G + E L L + Sbjct: 500 RLEQSIQQATRKGDKLAVVFIDLD-RFKNINDSLGHRAGDSLLEQLAQRLCQQRRKSD 556 Score = 59.5 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 18/154 (11%), Positives = 45/154 (29%) Query: 530 VERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSG 589 +R ++ + E+ L + L D+ + F + E++ G Sbjct: 78 AQRTAQLSQVLAELHSTQATLNSRENHYAQALKFSQTGSWEFDVVTEKVFWSEEVERIWG 137 Query: 590 WTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSIT 649 G I D +N+ + + + V + Sbjct: 138 MEPGTFRGELQQVQGAIHPEDVEHWQKNVQDCREKGKEHRIEYRIIHPDASIHWVQALGS 197 Query: 650 PLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSAS 683 G+ I + ++ D+TE +++ + + Sbjct: 198 AEKDDQGNVIRLLGIVMDITERKQLELEHKETEM 231 >UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q21SZ9_RHOFD Length = 1169 Score = 675 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 149/744 (20%), Positives = 287/744 (38%), Gaps = 28/744 (3%) Query: 367 ISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQ 426 ++ S E R +W +L S + G+ + + L+ Q+ Sbjct: 433 LTRRNEQQSAELRQRALQERWLWTVLGGSALVFA-GSAYFLLRLRRSNRMLEALNTQVQR 491 Query: 427 LMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQH 486 ++ +A ++ L + +L P V + + PE Sbjct: 492 SQNQLQATFDAIPDPLFVLGLDGRYYDCRSSRADLLAAPAEDLIGKTV-SDVLPPEAASI 550 Query: 487 AEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQL 546 +R++ + + +F + + G R + + R + ++ D+TE KQ Sbjct: 551 CLSALREANEKGTSTGKQFELQLAHGRAWFELSVARKSVGQRQEPRFIVLSRDITERKQA 610 Query: 547 NEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHI 606 EAL E + D + +N +++G++ +E +G + Sbjct: 611 EEALRIAATAFE-----SQEGMTVTDAQGAVLRINRAFTEITGYSADEVVGHNPRLLQ-- 663 Query: 607 TFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQ 666 + + ++ + + + ++ ++G +Y SIT + G V Sbjct: 664 SGRHDKAFYAAMWESIRRTGSWQGEIWNRRKNGEAYPELLSITAVKENGGIVTHYVGTFM 723 Query: 667 DVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKA 726 D+T + ++ A D T L NR +L+ L ++ AL+ IDLD FK Sbjct: 724 DITRRKAAEDEIRNLAFFDLQTGLPNRRLLLDRLQQALAASARHRRQGALLLIDLDNFKT 783 Query: 727 VNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE------SARFI 780 +ND+ GH GD LL+++A + S + +ARLGGDEF ++L + + A + Sbjct: 784 LNDTLGHDKGDLLLQQVAQRLASCVHEGGTVARLGGDEFVVMLENLSEHLEAAATQAETL 843 Query: 781 ATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRV 840 A RI++++ + +G ++ AS GITL + +++ +AD+A Y +K GR + Sbjct: 844 AKRILASLKQT-YSLDGYEYQSTASIGITLFSEQQETTEDLLKRADLAMYQAKAVGRNTL 902 Query: 841 TVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SC 899 ++P+ A + RAA+ + R + ++ ++ + +L W Sbjct: 903 RFFDPEMQAVVTSRAALEAGLR-RAVTSDEFLLYYQAQVDGQ---GHLTGCEALLRWQHP 958 Query: 900 EGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK---GISISLPLSVAGLSS 956 E ++ F D L L R V Q A+ +++++ +SV Sbjct: 959 ERGLVAPGEFIALAEDTGLILPLGRWVLDAACTQLAQWATRPEMAHLTVAVNVSVRQFHQ 1018 Query: 957 ATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQK----LRLAGCRIVLSQVGRDL 1012 A VN +L L+++ P+ L L + ++ E V L+ G L G Sbjct: 1019 ADFVNQVLTVLDSTGTNPQRLKLELTESLLIGDVEDVIAKMSILKEKGVGFSLDDFGTGY 1078 Query: 1013 QIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMD 1072 + LK D L +D N+ + D + ++ LG+ IA V + D Sbjct: 1079 SSLSYLKRLPLDQLKIDQGFVRNILIDPNDAAIARMVIALGDSLGLAVIAEGVEIEAQRD 1138 Query: 1073 TLSGIGVDLIYGEVIADAQPLDLL 1096 L+ +G G + PLD Sbjct: 1139 FLARLGCHACQGYLFCRPLPLDQF 1162 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 32/139 (23%), Positives = 55/139 (39%), Gaps = 2/139 (1%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 ERK E+ A E S GM + +G L+ N+A + GYS +E+ G + L Sbjct: 605 TERKQAEEALRIAATAFE-SQEGMTVTDAQGAVLRINRAFTEITGYSADEVVGHNPRLLQ 663 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 + + I ++ E +NG+ LL+++ V+ G +++ Sbjct: 664 SGRHDKAFYAAMWESIR-RTGSWQGEIWNRRKNGEAYPELLSITAVKENGGIVTHYVGTF 722 Query: 412 EDINELKRTEQVNQQLMER 430 DI K E + L Sbjct: 723 MDITRRKAAEDEIRNLAFF 741 Score = 78.4 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 42/266 (15%), Positives = 85/266 (31%), Gaps = 11/266 (4%) Query: 288 YAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTF 347 A + S+ + + + ++G +G++ + L E+L G T Sbjct: 480 RMLEALNTQVQRSQNQLQATFDAIPDPLFVLGLDGRYYDCRSSRADLLAAPAEDLIGKTV 539 Query: 348 QQLTWPEDLNKDLQQVEKLIS-GEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 + PE + L + + G E + + W L+V+ Sbjct: 540 SDVLPPEAASICLSALREANEKGTSTGKQFELQLAH---GRAWFELSVARKSVGQRQEPR 596 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP 466 FI DI E K+ E+ RI G+ + + + ++ E+ Sbjct: 597 FIVLSRDITERKQAEEAL-----RIAATAFESQEGMTVTDAQGAVLRINRAFTEITGYSA 651 Query: 467 HIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA-NRVLN 525 D + + +S++ ++ E K+G + L+ V Sbjct: 652 DEVVGHNPRLLQSGRHD-KAFYAAMWESIRRTGSWQGEIWNRRKNGEAYPELLSITAVKE 710 Query: 526 KEGEVERLLGINMDMTEVKQLNEALF 551 G V +G MD+T K + + Sbjct: 711 NGGIVTHYVGTFMDITRRKAAEDEIR 736 Score = 62.6 bits (151), Expect = 9e-08, Method: Composition-based stats. Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 3/195 (1%) Query: 488 EKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLN 547 ++ I + + E R L L G LL + ++ LN Sbjct: 427 QREINELTRRNEQQSAELRQRALQERWLWTVLGGSALVFAGSAYFLLRLRRSNRMLEALN 486 Query: 548 EALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHIT 607 + + + +L T D+I + + + + + + E+ +G + VL Sbjct: 487 TQVQRSQNQLQATFDAIPDPLFVLGLDGRYYDCRSSRADLLAAPAEDLIGKTVSDVLPPE 546 Query: 608 FGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQD 667 + + A+ ++ + L G + S+ S +++ +D Sbjct: 547 AA--SICLSALREANEKGTSTGKQFELQLAHGRA-WFELSVARKSVGQRQEPRFIVLSRD 603 Query: 668 VTESRKMLRQLSYSA 682 +TE ++ L +A Sbjct: 604 ITERKQAEEALRIAA 618 >UniRef50_B9ZMB9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZMB9_9GAMM Length = 817 Score = 674 bits (1740), Expect = 0.0, Method: Composition-based stats. Identities = 216/809 (26%), Positives = 355/809 (43%), Gaps = 33/809 (4%) Query: 302 THFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRG-LTFQQLTWPEDLNKDL 360 T F+ E + ++ G + N+A + LGY+Q+EL G + + DL Sbjct: 8 TRFQRLFEQAPEAQLVLNRAGHVVAANQAASRLLGYAQDELTGGIHITTI----DLEATQ 63 Query: 361 QQVEKLISGEINTY--SMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELK 418 V++ E RY R+G A + ++ + G + +A + DI + Sbjct: 64 ADVDRAHGQPDERLPARFETRYRRRDGAEFPAEININAIH--TGEDIEVLATVRDITRQQ 121 Query: 419 RTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDK--RMFELYEIPPHIKPNWQVWY 476 ++EQ +L +++ + ++ +F+ + + L P + Sbjct: 122 QSEQALHELETQLSATIRHAPLLLFGLGPD-GVFTLSEGAALHSLGLQPGEVVGQDARLL 180 Query: 477 ECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGI 536 P I +L+ F+ E ++ + + G +LG+ Sbjct: 181 YADHP----AILSAIDRALEGEQ-FQSEVKVGDSHFAISWMPMEVAQSFQPG----VLGV 231 Query: 537 NMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEAL 596 D+T ++ + E++RL TL SI + V+ D ++T++NP A + G Sbjct: 232 AWDITSLRAAEASTASERDRLLTTLHSISDGVLTADTTGRLTYLNPSARDLLGVDATAVQ 291 Query: 597 GVPLLTVLHITFGDNGPLMENIYSADTSRSAI--EQDVVLHCRSGGSYDVHYSITPLSTL 654 G L +L + G + N + + VL G + V ++PL Sbjct: 292 GQRLDELLELEDTHTGHRVMNPVTQCLETGMTLESPERVLRRPDGAARVVRLLVSPLRRP 351 Query: 655 DGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRH 714 D + G V+V+ D TE +M +QL++ A+HD LT L NR FE++L L+T+ H Sbjct: 352 DHHSEGVVVVLHDHTELWRMTQQLNHQATHDELTGLCNRREFERRLDEALRTLEEGDTPH 411 Query: 715 ALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNV 774 AL ++DLD+FK +ND+ GH AGDALLRELA L+ + +R SD LARLGGDEFGLLL C V Sbjct: 412 ALFYMDLDQFKIINDTCGHQAGDALLRELADLLPAHIRDSDTLARLGGDEFGLLLRHCPV 471 Query: 775 ESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKN 834 E A I ++++ F WEGR VG S G+ I+ EV+SQAD ACY +K+ Sbjct: 472 ERAEAIGNKLLATAQGLRFSWEGRRFDVGMSIGLVPIEGPGQNLPEVLSQADSACYVAKD 531 Query: 835 GGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKEN-QLMMLAHGVASPRIPEA-RNLWLI 892 GR R+ ++P M + R E + + A V + + I Sbjct: 532 LGRNRLYTWKPSDQILRRRHGEMEWVGRLRAALEEARFVAYAQPVKPLNGADLPLDHVEI 591 Query: 893 SLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAA----KAVASKGISISLP 948 L+L +G +I F + L +DR V F+Q A + + +S+ Sbjct: 592 LLRLHGEDGTLITPGAFIPAAERYHLMPEIDRHVVELVFRQLADHRDRNPHHAPVVVSIN 651 Query: 949 LSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIV 1004 LS L+ ++ + ++ + + + + A + H + ++ LR GCR Sbjct: 652 LSGQSLAQDGMLEFITSRMSQFRIQAQQIIFEVTETAAISHHDRAQGLIRALRYMGCRFS 711 Query: 1005 LSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGP 1064 L G L F LK D+L +DG ++ N +D ++T I LG++TIA Sbjct: 712 LDDFGSGLSSFGYLKNLPVDFLKVDGSFVRDIATNAVDAAMVTAIHRVGHVLGLRTIAEC 771 Query: 1065 VVLPLVMDTLSGIGVDLIYGEVIADAQPL 1093 V M L IG+D + G +A PL Sbjct: 772 VESEETMHHLREIGLDFVQGYHLAKPIPL 800 Score = 66.4 bits (161), Expect = 7e-09, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 117/350 (33%), Gaps = 30/350 (8%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + + + + E ET + ++ + + +G +G + + A LG E+ G Sbjct: 117 ITRQQQSEQALHELETQLSATIRHAPLLLFGLGPDGVFTLSEGAALHSLGLQPGEVVGQD 176 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 + L D L +++ + GE + E + + + + W + V+ Sbjct: 177 ARLLYA--DHPAILSAIDRALEGEQ--FQSEVKVGDSHFAISWMPMEVAQSFQP-----G 227 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP 466 + DI L+ E +R+ + G+ + + + +L + Sbjct: 228 VLGVAWDITSLRAAEASTASERDRLLTTLHSISDGVLTADTTGRLTYLNPSARDLLGVDA 287 Query: 467 HIKPNWQVWYECVLPEDR---QHAEKVIRDSLQSRSPFKLEFRITVK--DGIRHIRALAN 521 ++ E + ED + L++ + R+ + R +R L + Sbjct: 288 TAVQGQRL-DELLELEDTHTGHRVMNPVTQCLETGMTLESPERVLRRPDGAARVVRLLVS 346 Query: 522 RVLNKEGEVERLLGINMDMTEVKQLNEALFQE-----------KERLHITLDSIGEAVVC 570 + + E ++ + D TE+ ++ + L + + LD + Sbjct: 347 PLRRPDHHSEGVVVVLHDHTELWRMTQQLNHQATHDELTGLCNRREFERRLDEALRTLEE 406 Query: 571 IDMAMKITFMN-PVAEKM---SGWTQEEALGVPLLTVLHITFGDNGPLME 616 D + +M+ + + G +AL L +L D+ L Sbjct: 407 GDTPHALFYMDLDQFKIINDTCGHQAGDALLRELADLLPAHIRDSDTLAR 456 Score = 59.9 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 48/155 (30%), Gaps = 3/155 (1%) Query: 283 MTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEEL 342 + + + RA + + + G+ T G+ N + LG + Sbjct: 231 VAWDITSLRAAEASTASERDRLLTTLHSISDGVLTADTTGRLTYLNPSARDLLGVDATAV 290 Query: 343 RGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSM---EKRYYNRNGDVVWALLAVSLVRH 399 +G +L ED + + + + ++ E+ +G L VS +R Sbjct: 291 QGQRLDELLELEDTHTGHRVMNPVTQCLETGMTLESPERVLRRPDGAARVVRLLVSPLRR 350 Query: 400 TDGTPLYFIAQIEDINELKRTEQVNQQLMERITLA 434 D + + D EL R Q L Sbjct: 351 PDHHSEGVVVVLHDHTELWRMTQQLNHQATHDELT 385 >UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Proteobacteria RepID=Q0AIX2_NITEC Length = 791 Score = 674 bits (1739), Expect = 0.0, Method: Composition-based stats. Identities = 162/769 (21%), Positives = 300/769 (39%), Gaps = 54/769 (7%) Query: 377 EKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANE 436 + R+Y+R+G +VW L + L+R P + DI+E KRTE + Q + L Sbjct: 16 DYRFYHRDGRIVWLLDQLQLIRDAGDRPYEVVGTCLDISERKRTELIRQAQQSALDLIVT 75 Query: 437 AGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAE--KVIRDS 494 + + ++ ++ + + M + ++ LP+D A + I + Sbjct: 76 NQSLPVILSDIAKHLEAINPDMLVSILLLDKQTKRLKLGAAPSLPDDYNAAVNGQEIGEG 135 Query: 495 LQ--SRSPFKLEFRITVK-DGIRHIRA-------------LANRVLNKEGEVERLLGINM 538 + + F+ E I D H + + ++ +V + I Sbjct: 136 VGSCGTAAFRGETVIVSDIDHHPHWQHFLDLTRKADLHACWSLPFKDEHNDVLGIFAIYH 195 Query: 539 DM------------------TEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFM 580 + T + + SI E VV D+ +I + Sbjct: 196 HIACEPSPKDLELIREFASFTALAVQKVRATEALRLSATVFASIREGVVITDLEPRIVAV 255 Query: 581 NPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGG 640 N +++G+++E+ LG + + + + +++ + +V ++G Sbjct: 256 NRAYMRITGYSEEQVLGKNPKIIK--SGLHDKTFYQAMWATLKATGHWSGEVWNRRKNGE 313 Query: 641 SYDVHYSITPLS-----TLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRAS 695 Y +I + + ++ V V D+++ ++ QL+ A +D LT L NR Sbjct: 314 IYPQWLTINAVCIDSSCCDESNSCNYVGVFTDISQIKQSEAQLAQLAHYDPLTGLPNRLL 373 Query: 696 FEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSD 755 + QL ++ + +++IDLDRFK VNDS GH GD LL +LA M +R D Sbjct: 374 AQSQLHQAIERAQRHGRLVGVLYIDLDRFKNVNDSLGHPVGDELLIKLAERMKKRVREED 433 Query: 756 VLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDN 814 LARLGGDEF L+L D ++ F+A +I+ + + G + AS GI+L ++ Sbjct: 434 TLARLGGDEFLLVLEDVRDLGDPAFVAQSLINLLTSPFVLPSGHEIFINASIGISLFPED 493 Query: 815 NHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMML 874 A E++ +D+A Y +K GR + + A +ER M + + +L++ Sbjct: 494 ASNATELIQHSDMAMYQAKKEGRNTYRYHTEALSVAANERLIME-NRLRYALSAEELILH 552 Query: 875 AHGVASPRIPEARNLWLISLKLWSCEGE-IIDEQTFRRSFSDPALSHALDRRVFHEFFQQ 933 + R + + +L W G+ ++ F + L L V +Q Sbjct: 553 YQPLVDAR--TGYVVGVEALVRWQPPGKAMVPPGKFIPIAEETGLIVPLGEWVLRTACKQ 610 Query: 934 AAKA--VASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE 991 A + +++ LSV S LV + LE + LP L L + ++H E Sbjct: 611 ARAWIDAGLSPLVMAVNLSVRQFQSENLVGMVQRILEETQLPADYLELELTESMFMEHVE 670 Query: 992 ----SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLIT 1047 ++ KL+ G + + G LK D L +D ++ + D + Sbjct: 671 QSIETLNKLKTLGVHLAIDDFGTGYSSLIYLKRFPIDKLKIDQRFVRDLADDHNDREIAA 730 Query: 1048 IIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 I A+ L + +A + + L D G + P L Sbjct: 731 TIIAMARGLKLGVLAEGIESEEQLAFLRQQDCDYYQGYLFHRPVPAIEL 779 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 56/153 (36%), Gaps = 6/153 (3%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 A ++ +E+ G+ + E + + N+A + GYS+E++ G Sbjct: 215 FTALAVQKVRATEALRLSATVFASIREGVVITDLEPRIVAVNRAYMRITGYSEEQVLGKN 274 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVV--WALLAVSLVRHT---D 401 + + Q + + +S E +NG++ W + + + + Sbjct: 275 PKIIKSGLHDKTFYQAMWATLK-ATGHWSGEVWNRRKNGEIYPQWLTINAVCIDSSCCDE 333 Query: 402 GTPLYFIAQIEDINELKRTEQVNQQLMERITLA 434 ++ DI+++K++E QL L Sbjct: 334 SNSCNYVGVFTDISQIKQSEAQLAQLAHYDPLT 366 >UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=3 Tax=Neisseriaceae RepID=C1DBY5_LARHH Length = 839 Score = 673 bits (1738), Expect = 0.0, Method: Composition-based stats. Identities = 132/583 (22%), Positives = 238/583 (40%), Gaps = 17/583 (2%) Query: 529 EVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMS 588 E E + + + E + Q ++ E ++ D I +NP +++ Sbjct: 256 EHEYVHELQYALKERDEALNLSQQNLRLADKVFEATLEGIIITDAEGIIETVNPAFTRIT 315 Query: 589 GWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSI 648 GW +EE +G + + +++ + + +V+ + G Y H +I Sbjct: 316 GWRREEVVGKNPRIL--SSSQQPPEFYRHLWQSLREHGFWQGEVINRRKDGKFYTEHLTI 373 Query: 649 TPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVN 708 T + DG+ + D+T+ + +L Y A+HD LT L NR ++L L + Sbjct: 374 TGIRGPDGTFTHYAGIFSDITQRKLNEERLHYLANHDPLTDLPNRTLLMERLGAALTRAH 433 Query: 709 STHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLL 768 +R AL+F+DLDRFK +ND+ GHA GD LL+ +AS + LR+SD +ARLGGDEF ++ Sbjct: 434 RQGKRVALMFLDLDRFKFINDTLGHAVGDKLLQTVASRLTGSLRASDTVARLGGDEFNIV 493 Query: 769 LPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADI 827 L D ++ A ++I V +G V AS GI + D+ + AD Sbjct: 494 LEDIRDLRGVAQTAQKLIDRVQGM-VTLDGHDVYVTASVGIAIYPDDGSTPEVLRMNADT 552 Query: 828 ACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEAR 887 A Y +K G+ + A+ R + + R + + + + Sbjct: 553 AMYRAKERGKNNFQFFTADMNASTLARLRLESN-LHRALARQEFQLHFQPKVD--LAHGH 609 Query: 888 NLWLISLKLWS-CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGI--S 944 + +L W E + F + L + V + +QA + + + Sbjct: 610 IYGMEALLRWRSHELGPVSPADFIPIAEESNLISTIGEWVLEQACRQARHWLNLGLLPGT 669 Query: 945 ISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRLAG 1000 +++ LS ++ +V + LE+S LP L L I +D+ +++ L+ G Sbjct: 670 VAVNLSSKQMTQGDIVATVRRILEHSNLPGHYLELEITESVAMDNTGEMIRTLKNLKALG 729 Query: 1001 CRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKT 1060 RI + G + LK D L +D ++ + D + + I Q L ++ Sbjct: 730 VRIAIDDFGTGYSSLSYLKQLPIDVLKIDRSFVTDLHEDRDDAAIASAIISMGQSLNLQP 789 Query: 1061 IAGPVVLPLVMDTLSGIGVDLIYGEVIADAQP---LDLLVNSS 1100 +A V L G G + + P ++ L+ S Sbjct: 790 VAEGVEREEHRQFLLDHGCQYGQGYLFSRPVPAATMEQLLLES 832 Score = 86.5 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 71/183 (38%), Gaps = 4/183 (2%) Query: 255 SLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNA---MEYS 311 L T ++ + ++ + + + YA + + ++ S+ + R A E + Sbjct: 232 HLGITSENNQLTGLVGFADIMASIEHEYVHELQYALKERDEALNLSQQNLRLADKVFEAT 291 Query: 312 AIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEI 371 G+ + EG N A + G+ +EE+ G + L+ + + + + + + E Sbjct: 292 LEGIIITDAEGIIETVNPAFTRITGWRREEVVGKNPRILSSSQQPPEFYRHLWQSLR-EH 350 Query: 372 NTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERI 431 + E ++G L ++ +R DGT ++ DI + K E+ L Sbjct: 351 GFWQGEVINRRKDGKFYTEHLTITGIRGPDGTFTHYAGIFSDITQRKLNEERLHYLANHD 410 Query: 432 TLA 434 L Sbjct: 411 PLT 413 >UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B341_9CHRO Length = 1342 Score = 673 bits (1738), Expect = 0.0, Method: Composition-based stats. Identities = 174/819 (21%), Positives = 328/819 (40%), Gaps = 64/819 (7%) Query: 292 AERKHISES----ETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTF 347 ERK+ E+ + + + + +G L L S +E G T Sbjct: 544 TERKNAEEATNKINAQMQAIFDAFPDILFRIDQQGTILDYKTQDHHSLYCSPQEFIGRTV 603 Query: 348 QQLTWPEDLNKDLQQ--VEKLISGEINTYS------MEKRYYNRNGDVVWALLAVSLVRH 399 Q++ PE + L + + L+SGEI + ++KR+++ +VR Sbjct: 604 QEVL-PESVGNLLYEGVQKALVSGEIVSIEYFLIIALQKRFFD-----------ARIVRL 651 Query: 400 TDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMF 459 + P+ IA + DI++ K+TE ++ ER+ G+ +L+ + + Sbjct: 652 S---PVETIAVVRDISDRKQTELALRESEERLKTIISTNPNGLLILDLQGKVLFVNPAAE 708 Query: 460 ELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRAL 519 L+ + + + + S ++ + + +R Sbjct: 709 ILFGRKQEDLMGQILGIPII---------------VNNYSEIEI---LQPSGKLIIVRMR 750 Query: 520 ANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITF 579 +++ +E L +D+T+++Q E L + L+ + +VV D I + Sbjct: 751 LVKIIWQEKNA--FLASLVDVTDIQQAQEQL----KILYQATEQSPVSVVITDAEGTIEY 804 Query: 580 MNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSG 639 +NP EK++G+ + E +G + + + I+ TS + ++G Sbjct: 805 VNPKFEKITGYQRAEVIGQNPRILK--SGETTTEEYKQIWKTITSGQEWHGEFHNKKKNG 862 Query: 640 GSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQ 699 + SI+P+ +G V V +D+TE + L+Y A++DALT L NR + Sbjct: 863 ELFWEAASISPIKNAEGIITHFVAVKEDITERKAQQTTLTYQANYDALTGLPNRFLAIDR 922 Query: 700 LRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLAR 759 L+ + + +R A++FIDLD FK VND+ GH GD LL++++ + LR SD +AR Sbjct: 923 LKQAILQADRQKKRVAVMFIDLDHFKDVNDTLGHEYGDLLLQKVSQRLKQCLRKSDTVAR 982 Query: 760 LGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQA 818 LGGDEF ++LP+ + IA++I+S++ + F + AS GITL D+ + Sbjct: 983 LGGDEFLIILPNLRETHHCKLIASKILSSL-EKPFNLLTEEAFISASIGITLYPDDGNDV 1041 Query: 819 AEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGV 878 + +M AD A Y K GGR Y R + ++ +K+N+ ++ + Sbjct: 1042 SVLMRNADAAMYLGKRGGRNDFKFYTMGMNEEAQSRLRIEKLLRY-ALKKNEFYLVYQPI 1100 Query: 879 ASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA 937 R + +L W + E + F + L L V + Q+ Sbjct: 1101 IDLRFQT--VIGAEALLRWNNPELGRVSPDQFISIAEETGLISELGAWVISQACQEVVNW 1158 Query: 938 V-ASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH----AES 992 I +++ LS + L+ + + + + L L I + +L+ Sbjct: 1159 QTQGSPIWVAVNLSPRQFRESKLLEIISNAITLNGITNHYLELEITEKLLLEDFPGSKGI 1218 Query: 993 VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGH 1052 +++L R+ + G + L + L +D A++ N L+ I Sbjct: 1219 IEQLHEMDFRLSIDDFGTGYSALSYLIKFPFNRLKIDRSFIADIPHNQEVLALVKTIIAM 1278 Query: 1053 AQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQ 1091 L ++ IA V + L G D G + Sbjct: 1279 GHGLKLQVIAEGVETTEQANILEAEGCDYAQGYFFSRPL 1317 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 70/408 (17%), Positives = 156/408 (38%), Gaps = 33/408 (8%) Query: 276 ILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFL 335 I + I M + + + + + + N + + +G+ G+WL N+ Sbjct: 406 IAIYIMISVMDVSQQQGTEESLQKLLRLYTNLTQAAPVGIFRADESGKWLYANEKALLIS 465 Query: 336 GYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVS 395 G S ++ G+ + +D + + K I + ++ E RY + +G+ W L+ Sbjct: 466 GISLDKAIGMGWANYVHNDDRARVFNEWIKSIQTQT-SWRTEYRYRHSDGNNTWVLVQAI 524 Query: 396 LVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWD 455 G + ++ + DI E K E+ ++ ++ +A ++ + + I + Sbjct: 525 PEMDEQGKIVGYLGTLTDITERKNAEEATNKINAQMQAIFDAFPDILFRIDQQGTILDYK 584 Query: 456 KR-MFELYEIPPHIKPNWQVWYECVLPEDRQHAE-KVIRDSLQSRSPFKLEFRITVKDGI 513 + LY P + VLPE + + ++ +L S +E+ + + Sbjct: 585 TQDHHSLYCSPQEFIGRT---VQEVLPESVGNLLYEGVQKALVSGEIVSIEYFLIIALQK 641 Query: 514 RHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDM 573 R A R+ + + D+++ KQ AL + +ERL + + ++ +D+ Sbjct: 642 RFFDARIVRL-----SPVETIAVVRDISDRKQTELALRESEERLKTIISTNPNGLLILDL 696 Query: 574 AMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVV 633 K+ F+NP AE + G QE+ +G L + + +++ Sbjct: 697 QGKVLFVNPAAEILFGRKQEDLMGQILGIPIIVNNYSEIEILQP---------------- 740 Query: 634 LHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYS 681 SG V + + + + + + DVT+ ++ QL Sbjct: 741 ----SGKLIIVRMRLVKIIWQEKN--AFLASLVDVTDIQQAQEQLKIL 782 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 57/395 (14%), Positives = 133/395 (33%), Gaps = 31/395 (7%) Query: 296 HISESETHF----RNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 ++E+E F + S + L G G+ N+A Q+E++ T Sbjct: 174 ELNEAELLFDKNHKIISLNSPAAIILTG--GK----NQAEALIF--LQKEMKRKLLWLKT 225 Query: 352 WPEDLNKDLQQVEKL---ISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFI 408 E ++ Q+ K I ++ E ++ R L + + + Sbjct: 226 QIEQFSRSNQEENKCKIFIKTQLEQQRFEAKFTRRAEGTAVTLTRLFDLPDSQTNVQQLE 285 Query: 409 AQI--EDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP 466 ++ E + ++ + A + I +L+ N+ ++ E++ Sbjct: 286 KRLKPEVTPKDNPHNPPSENRISIKEFAITSSISAIAIGDLQGNLTYVNQAFLEMWRYDN 345 Query: 467 HIK----PNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRH-IRALAN 521 + P W + + ++++R + E KD + AN Sbjct: 346 DDEVLGKPFLNFWQ-------IDQQGETLIQTIRTRGQWIGELIAKKKDKSLFKAQVSAN 398 Query: 522 RVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMN 581 V N+ ++ MD+++ + E+L + + + D + K + N Sbjct: 399 LVKNEANIAIYIMISVMDVSQQQGTEESLQKLLRLYTNLTQAAPVGIFRADESGKWLYAN 458 Query: 582 PVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGS 641 A +SG + ++A+G+ +H D + + ++++ + G + Sbjct: 459 EKALLISGISLDKAIGMGWANYVH--NDDRARVFNEWIKSIQTQTSWRTEYRYRHSDGNN 516 Query: 642 YDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLR 676 V P G +G + + D+TE + Sbjct: 517 TWVLVQAIPEMDEQGKIVGYLGTLTDITERKNAEE 551 Score = 80.7 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 45/294 (15%), Positives = 100/294 (34%), Gaps = 38/294 (12%) Query: 262 TYLMSHMPWLPFLLILLPANIMTMVMYAFRAERK---HISESETHFRNAMEYSAIGMALV 318 + + ++ L V+ ++ + ESE + + + G+ ++ Sbjct: 635 LIIALQKRFFDARIVRLSPVETIAVVRDISDRKQTELALRESEERLKTIISTNPNGLLIL 694 Query: 319 GTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEK 378 +G+ L N A G QE+L G +N YS E Sbjct: 695 DLQGKVLFVNPAAEILFGRKQEDLMGQILGIPII------------------VNNYS-EI 735 Query: 379 RYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAG 438 +G ++ ++ + LV+ F+A + D+ ++++ ++ + + A E Sbjct: 736 EILQPSGKLI--IVRMRLVKIIWQEKNAFLASLVDVTDIQQAQEQLKI----LYQATEQS 789 Query: 439 GIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWY----ECVLPEDRQHAEKVIRDS 494 + + + + I + + ++ E E K I + Sbjct: 790 PVSVVITDAEGTIEYVNPKFEKITGYQRAEVIGQNPRILKSGETTTEEY-----KQIWKT 844 Query: 495 LQSRSPFKLEFRITVKDGIRHIRALA-NRVLNKEGEVERLLGINMDMTEVKQLN 547 + S + EF K+G A + + + N EG + + + D+TE K Sbjct: 845 ITSGQEWHGEFHNKKKNGELFWEAASISPIKNAEGIITHFVAVKEDITERKAQQ 898 >UniRef50_A3ISZ5 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. CCY0110 RepID=A3ISZ5_9CHRO Length = 750 Score = 673 bits (1737), Expect = 0.0, Method: Composition-based stats. Identities = 191/703 (27%), Positives = 340/703 (48%), Gaps = 16/703 (2%) Query: 413 DINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPN--IFSWDKRMFELYEIPPHIKP 470 ++++ +R+E ++ + I+ + + + + P Sbjct: 46 EVHKYQRSETALLSTKSQLHRLLSCSPVVIYSRQASDGFALTFISNSIQQFGYQPREFLK 105 Query: 471 NWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRIT-VKDGIRHIRALANRVLNKEGE 529 + + W C+ PED + + + ++R+ R ++ + ++ G Sbjct: 106 DRKFWSHCIHPEDILEVCAQLLNLFAEETQI-CQYRLRDHNGNYRWVQDQRKLMRDEMGN 164 Query: 530 VERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSG 589 ++G D+TE K++ +ALF EKE +TL SIG+ V+ + + ++ ++NPVAEK++G Sbjct: 165 ATEIIGSWQDITERKEIEQALFCEKELAQVTLKSIGDGVITTNFSGEVLYLNPVAEKLTG 224 Query: 590 WTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSA---IEQDVVLHCRSGGSYDVHY 646 WT E A G P+ + N +E+ + + D++L R G Y + Sbjct: 225 WTVETAKGKPVTAIFQTINELNEEPIESCVCQLLRQETSICVNDDILLISRDGSRYAIDE 284 Query: 647 SITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQT 706 S +P+ + IG+VLV +DVT+ R++ R++++ A+HD LT L NR SFE+QL + Sbjct: 285 SASPIYNHNQEMIGTVLVFRDVTKPRQLARKIAWQANHDGLTKLMNRRSFEEQLDRAILE 344 Query: 707 VNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFG 766 + H L ++DLD+FK VND+ GH AGD LLR+LA L +R+SD +ARLGGDEFG Sbjct: 345 ARTHQNSHILCYLDLDQFKVVNDTCGHIAGDELLRQLAELFNHQVRTSDKIARLGGDEFG 404 Query: 767 LLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQAD 826 +LL C +++ + IA ++ + D+ F W+ + +GAS G+ I+++ ++S AD Sbjct: 405 ILLHQCPLQAGKQIADKLRKLIEDFRFTWDDKTFAIGASIGLVEINEDTLDLNSLLSAAD 464 Query: 827 IACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWR-MIKENQLMMLAHGV--ASPRI 883 ACYA+K+ GR R+ +Y+ +R + ++EN+ + + +P Sbjct: 465 AACYAAKDNGRNRLHIYQADDHEVAKQREERQWISKIHLALEENRFCLYQQKIIPVNPSK 524 Query: 884 PEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGI 943 N + +++ EG+I+ F + L LDR V FF+ + S+ Sbjct: 525 KGQNNHNELLIRMIDREGKIVPPMAFIPAAERYDLMPVLDRWVVSHFFKYYSTLTNSQKQ 584 Query: 944 SI-SLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH----AESVQKLRL 998 I ++ LS + L+S +N L +QL+ P+ P L I + + +++L+ Sbjct: 585 EIYTINLSGSSLTSEQFLNFLKQQLKEHPISPETLCFEITETTAIANLSKAITFIRELKK 644 Query: 999 AGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGM 1058 GC L G + F LK DYL +DG ++ + +D ++ I +G+ Sbjct: 645 IGCHFALDDFGSGMSSFGYLKNLPIDYLKIDGSFIKDILKDPIDCEMVECINRVGHVMGI 704 Query: 1059 KTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPL-DLLVNSS 1100 +TIA V ++ L + +D G IA PL D L + Sbjct: 705 QTIAEFVESNEILQKLQKMNIDYAQGYGIAKPCPLFDSLQTQN 747 Score = 77.6 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 49/364 (13%), Positives = 110/364 (30%), Gaps = 34/364 (9%) Query: 263 YLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMA--LVGT 320 + + H +L + ++ ++ + +++ + S + + Sbjct: 23 HSLEHPESYQIAKLLKINEKLKAEVHKYQRSETALLSTKSQLHRLLSCSPVVIYSRQASD 82 Query: 321 EGQWLQTNKALCQFLGYSQEELR--GLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEK 378 + ++ Q GY E + PED+ + Q+ L + E + Sbjct: 83 GFALTFISNSIQQ-FGYQPREFLKDRKFWSHCIHPEDILEVCAQLLNLFAEETQI--CQY 139 Query: 379 RYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAG 438 R + NG+ W L+R G I +DI E K EQ E + ++ Sbjct: 140 RLRDHNGNYRWVQDQRKLMRDEMGNATEIIGSWQDITERKEIEQALFCEKELAQVTLKSI 199 Query: 439 GIGIWEWELKPNIFSWDKRMFELYEIPPHIKPN--WQVWYECVLPEDRQHAEKVIRDSLQ 496 G G+ + + +L ++ + + + E + L+ Sbjct: 200 GDGVITTNFSGEVLYLNPVAEKLTGWTVETAKGKPVTAIFQTINELNEEPIESCVCQLLR 259 Query: 497 SRSPFKLE---FRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEA---- 549 + + I+ I A+ + N E+ + + D+T+ +QL Sbjct: 260 QETSICVNDDILLISRDGSRYAIDESASPIYNHNQEMIGTVLVFRDVTKPRQLARKIAWQ 319 Query: 550 -------LFQEKERLHITLD--------SIGEAVVCIDMAMKITFMNPVAEKMSGWTQEE 594 + LD ++C + +N ++G +E Sbjct: 320 ANHDGLTKLMNRRSFEEQLDRAILEARTHQNSHILCYLDLDQFKVVNDTCGHIAG---DE 376 Query: 595 ALGV 598 L Sbjct: 377 LLRQ 380 >UniRef50_Q47Z22 Sensory box/GGDEF/GAF/EAL domain protein n=5 Tax=Gammaproteobacteria RepID=Q47Z22_COLP3 Length = 1206 Score = 673 bits (1736), Expect = 0.0, Method: Composition-based stats. Identities = 159/695 (22%), Positives = 286/695 (41%), Gaps = 24/695 (3%) Query: 416 ELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI-PPHIKPNWQV 474 E + + E++ L +G W+W + ++R + +K + Sbjct: 507 EKIQANLALKASDEQMQLVLAGADLGFWDWNIVTGRVDRNERWATMLGYTHKELKHSTNQ 566 Query: 475 WYECVLPEDRQHAEKVIRDSLQSRS-PFKLEFRITVKDG-IRHIRALANRV-LNKEGEVE 531 W + V EDR+ A + I D L+ RS LE+R+ K+G R + AN + + G+ Sbjct: 567 WADFVHQEDREKAWQSINDVLEGRSKSHSLEYRMLTKEGGYRWVHDQANVMQRHSNGKPL 626 Query: 532 RLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWT 591 R+ G + D+T K E + + GE ++ D I +N ++G++ Sbjct: 627 RMSGTHSDITNRKLAEEKI----KLAASVFSHAGEGIIITDDKATIIDINDAFTNITGFS 682 Query: 592 QEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPL 651 +EEA+G + + +++ A + +V ++G Y V +I+ + Sbjct: 683 REEAIGKNPRILQ--SGRQTPEFYADMWQALQNEGYWSGEVWNRRKNGEVYAVMQTISAV 740 Query: 652 STLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTH 711 + G V + D+T ++ QL + A D LT+L NR +L + + Sbjct: 741 RDVHGIATHYVSLGNDITLMKEHQNQLEHIAHFDILTNLPNRVLLADRLSQAMLQCSRHK 800 Query: 712 QRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD 771 Q A+VF+DLD FK VND+ GH GD LL L+ M LR +D LAR+GGDEF +L D Sbjct: 801 QSLAVVFLDLDGFKHVNDTHGHDIGDELLIALSVRMKEALRENDSLARIGGDEFVAVLAD 860 Query: 772 -CNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACY 830 VE + R++ A ++ I++ V + AS G+TL +N A +M AD A Y Sbjct: 861 LTTVEDCEPVLERLLLAASE-PVIFDNIVLNISASIGVTLYPQDNVGADLLMRHADQAMY 919 Query: 831 ASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLW 890 +K G+ R +++ Q A + SL+ + +Q ++ + R + Sbjct: 920 VAKESGKNRYHLFDTAQDDAVKVQRE-SLEAIRSALDNHQFVLHYQPKVNMR--KGIVTG 976 Query: 891 LISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVA---SKGISIS 946 + +L W +++ F + +S + V Q ++ + +SIS Sbjct: 977 VEALIRWQHPKRGLLNPIEFLPVIENNPMSIEMGEWVIDTALTQISQWQKLGLNFPVSIS 1036 Query: 947 LPLSVAGLSSATLVNDLLEQLENSP-LPPRLLHLIIPAEAILDH----AESVQKLRLAGC 1001 + ++ L + L+ L P + P L L + + L+ + + G Sbjct: 1037 VNIAALQLQQPDFTDRLMILLAAHPDVEPHYLELEVLETSALEDVYNVSTIMNACMALGV 1096 Query: 1002 RIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTI 1061 L G L+ A+ + +D ++ + D ++ + A+ I Sbjct: 1097 NFALDDFGTGYSSLTYLRRLPANLIKIDQSFVRDMLHDSDDLAIVEGVIALAKSFKRDVI 1156 Query: 1062 AGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 A V L +G +L G IA P + Sbjct: 1157 AEGVETIEHGTALLQLGCELAQGYGIARPMPASEI 1191 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 53/363 (14%), Positives = 119/363 (32%), Gaps = 32/363 (8%) Query: 276 ILLPANIMTMVMYAFRAERK--HISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQ 333 + L ++ A + + S+ + + + +G + N+ Sbjct: 492 MTLIEQAASLASIAIEKIQANLALKASDEQMQLVLAGADLGFWDWNIVTGRVDRNERWAT 551 Query: 334 FLGYSQEELRGLT--FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWAL 391 LGY+ +EL+ T + ED K Q + ++ G ++S+E R + G W Sbjct: 552 MLGYTHKELKHSTNQWADFVHQEDREKAWQSINDVLEGRSKSHSLEYRMLTKEGGYRWVH 611 Query: 392 LAVSLV-RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPN 450 +++ RH++G PL DI K E+ + G GI + K Sbjct: 612 DQANVMQRHSNGKPLRMSGTHSDITNRKLAEEKIKLAAS----VFSHAGEGIIITDDKAT 667 Query: 451 IFSWDKRMFELYEIPPHIKPNWQ---VWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRI 507 I + + + PE + +LQ+ + E Sbjct: 668 IIDINDAFTNITGFSREEAIGKNPRILQSGRQTPE----FYADMWQALQNEGYWSGEVWN 723 Query: 508 TVK-DGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGE 566 K + + + V + G + + D+T +K+ L+ I Sbjct: 724 RRKNGEVYAVMQTISAVRDVHGIATHYVSLGNDITLMKEHQNQ-----------LEHIAH 772 Query: 567 AVVCIDMAMKITFMNPVAEKMSGWTQE----EALGVPLLTVLHITFGDNGPLMENIYSAD 622 + ++ ++ + +++ M ++ + + L H+ + + + A Sbjct: 773 FDILTNLPNRVLLADRLSQAMLQCSRHKQSLAVVFLDLDGFKHVNDTHGHDIGDELLIAL 832 Query: 623 TSR 625 + R Sbjct: 833 SVR 835 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 63/406 (15%), Positives = 124/406 (30%), Gaps = 51/406 (12%) Query: 327 TNKALCQFLGYSQEELRGL--TFQQLTWPEDLNKDLQQVE-KLISGEINTYSMEKRYYNR 383 N LG S++++ + L P D + V+ ++SG+ Y +E R + Sbjct: 249 VNDEWLSILGLSRQDITNHISDWDGLIHPNDDQFMKKTVQTHILSGK--NYVVEFRMKHA 306 Query: 384 NGDVVWALLAVSLVRHTDG--TPLYFIAQIEDINELKRTEQVNQQLMERITLANEAG-GI 440 +G VW + S++ + + P+ +DI K E + + L Sbjct: 307 DGRWVWIQGSGSVIEYDENTHEPVRLCGTHQDITVRKLAELREKSRSHVLELLTSGDLLP 366 Query: 441 GIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRS- 499 I E ++ + + + K + P+ A I + S Sbjct: 367 VILEAIVRGVEQENSDMLCSILLLDDEGKHLLSGAAPSL-PDFYNSAINGIEIGVGVGSC 425 Query: 500 --PFKLEFRITVKDGIRHIRA---------------LANRVLNKEGEVERLLGINM---- 538 R+ V+D H + + + +G++ I Sbjct: 426 GTAAFTNKRVIVEDIQNHPYWTPYKELASKAGLGACWSEPIRSTQGKILGTFAIYHLEVN 485 Query: 539 -----DMT-------------EVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFM 580 +MT E Q N AL E++ + L ++ Sbjct: 486 KPTEANMTLIEQAASLASIAIEKIQANLALKASDEQMQLVLAGADLGFWDWNIVTGRVDR 545 Query: 581 NPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRS-AIEQDVVLHCRSG 639 N M G+T +E + D ++I RS + + + + G Sbjct: 546 NERWATMLGYTHKELKHSTNQWADFVHQEDREKAWQSINDVLEGRSKSHSLEYRMLTKEG 605 Query: 640 GSYDVHYSITPL-STLDGSNIGSVLVIQDVTESRKMLRQLSYSASH 684 G VH + +G + D+T + ++ +AS Sbjct: 606 GYRWVHDQANVMQRHSNGKPLRMSGTHSDITNRKLAEEKIKLAASV 651 Score = 76.5 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 57/153 (37%), Gaps = 4/153 (2%) Query: 411 IEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPH-IK 469 I++I+ LK + + +++ +G W+W + + + + I Sbjct: 206 IKNIDVLKLSNENVNSSQKQLLNVINGAKLGYWDWCYQTGEHVVNDEWLSILGLSRQDIT 265 Query: 470 PNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEG- 528 + W + P D Q +K ++ + S + +EFR+ DG + V+ + Sbjct: 266 NHISDWDGLIHPNDDQFMKKTVQTHILSGKNYVVEFRMKHADGRWVWIQGSGSVIEYDEN 325 Query: 529 --EVERLLGINMDMTEVKQLNEALFQEKERLHI 559 E RL G + D+T K L + Sbjct: 326 THEPVRLCGTHQDITVRKLAELREKSRSHVLEL 358 Score = 46.4 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 18/186 (9%), Positives = 58/186 (31%), Gaps = 6/186 (3%) Query: 539 DMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGV 598 ++ +K NE + +++L ++ +N + G ++++ Sbjct: 208 NIDVLKLSNENVNSSQKQLLNVINGAKLGYWDWCYQTGEHVVNDEWLSILGLSRQDITNH 267 Query: 599 PLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLD--G 656 I D+ + + + + S + + G + S + + + Sbjct: 268 ISDWDGLIHPNDDQFMKKTVQTHILSGKNYVVEFRMKHADGRWVWIQGSGSVIEYDENTH 327 Query: 657 SNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTH--QRH 714 + QD+T + + + L + L +++ V + Sbjct: 328 EPVRLCGTHQDITVRKLAELREKSRSHVLELLTSGD--LLPVILEAIVRGVEQENSDMLC 385 Query: 715 ALVFID 720 +++ +D Sbjct: 386 SILLLD 391 >UniRef50_Q21R50 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhodoferax ferrireducens T118 RepID=Q21R50_RHOFD Length = 1052 Score = 673 bits (1736), Expect = 0.0, Method: Composition-based stats. Identities = 147/700 (21%), Positives = 268/700 (38%), Gaps = 30/700 (4%) Query: 414 INELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQ 473 + R Q + + + I+ + + I ++RM L+ P H + Sbjct: 359 VKGFNRLLGTLGQREALLQQILDTSSVAIFLVDRQGRITKANQRMATLFGYPLHELQGME 418 Query: 474 VWYECVLPEDRQHAEKVIRDSLQSR-SPFKLEFRITVKDGIRHI-RALANRVLNKEGEVE 531 + V P R+ K + L S LE D R ++ GE + Sbjct: 419 -YVALVHPAQRETGRKNMLALLDSALQSVDLERLYWRADQTEFWGHLTGQRFVDGNGEEQ 477 Query: 532 RLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWT 591 L+G+ D+T+ +Q L + + D + +N ++G++ Sbjct: 478 GLVGVIADITQRRQTEAELRIAAIAFESE-----QGMAITDPQGVMLRVNRAFSAITGYS 532 Query: 592 QEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPL 651 EA+G + + + ++ + A + ++ ++G + +I+ + Sbjct: 533 APEAVGQNPRLL--SSGRHDAAFYAAMWDSLVREGAWQGEIWNRRKNGEVFPEWLTISAV 590 Query: 652 STLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTH 711 G V D++ + Q+ A +D LT L NR +L+ L + Sbjct: 591 KDPAGQATHYVATFTDLSTRKSAEDQIKSLAFYDTLTGLPNRRLLLDRLKQALASGARHR 650 Query: 712 QRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD 771 ++ AL++IDLD FK +N++ GH GD LL+E+A + LR+ D +AR GGD F +LL Sbjct: 651 RQGALLYIDLDDFKTLNNTYGHDVGDQLLQEVAQRLSHYLRAGDTVARPGGDSFVVLLEA 710 Query: 772 CNVE------SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDD-NNHQAAEVMSQ 824 + A +I A++ + HR AS G+TL DD E + + Sbjct: 711 LSTNSVEAATEAENTGEKIRLALSQ-PYQIADHAHRSTASIGVTLFDDRQQEGIDEPLKR 769 Query: 825 ADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIP 884 A++A Y +K GR + ++PQ A AA+ D + ++ NQ ++ S Sbjct: 770 AELAMYQAKTAGRNTLRFFDPQMQTAVMAMAALEADLR-EAVRSNQFLLYYQAQVS---G 825 Query: 885 EARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA---VAS 940 E + + +L W ++ F L L + V Q A Sbjct: 826 ERQVAGVEALVRWQHPVRGLVPPAEFIPLAEQTGLILPLGQWVLETACAQLAAWASQPER 885 Query: 941 KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQK----L 996 +++++ +S A V +L L+ + P+ L L + ++ AE V L Sbjct: 886 AHLTVAVNVSALQFHQADFVAQVLAALKRAGANPQRLKLELTESLLVHDAEDVIAKMITL 945 Query: 997 RLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRL 1056 + G L G + LK + L +D ++ + D + ++ A L Sbjct: 946 KEQGVGFSLDDFGTGYSSLSYLKRLPLNQLKIDQGFVRDILHDANDAAIAKMVVALADTL 1005 Query: 1057 GMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 G+ IA V D L+ G G + + A P+D Sbjct: 1006 GLSVIAEGVETEAQRDFLAAQGCHAYQGHLYSRALPIDAF 1045 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 46/302 (15%), Positives = 104/302 (34%), Gaps = 11/302 (3%) Query: 254 PSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAI 313 P L R M+ L + + + V+ F + + E + ++ S++ Sbjct: 326 PLLATARRLAAMADEKQALRALPVTHPDEIGQVVKGFNRLLGTLGQREALLQQILDTSSV 385 Query: 314 GMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINT 373 + LV +G+ + N+ + GY EL+G+ + L P + + L+ + + Sbjct: 386 AIFLVDRQGRITKANQRMATLFGYPLHELQGMEYVALVHPAQRETGRKNMLALLDSALQS 445 Query: 374 YSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITL 433 +E+ Y+ + W L +G + I DI + ++T + RI Sbjct: 446 VDLERLYWRADQTEFWGHLTGQRFVDGNGEEQGLVGVIADITQRRQT-----EAELRIAA 500 Query: 434 ANEAGGIGIWEWELKPNIFSWDKRMFELYEI--PPHIKPNWQVWYECVLPEDRQHAEKVI 491 G+ + + + ++ + P + N ++ + Sbjct: 501 IAFESEQGMAITDPQGVMLRVNRAFSAITGYSAPEAVGQNPRLLSSGRHD---AAFYAAM 557 Query: 492 RDSLQSRSPFKLEFRITVKDGIRHIRALA-NRVLNKEGEVERLLGINMDMTEVKQLNEAL 550 DSL ++ E K+G L + V + G+ + D++ K + + Sbjct: 558 WDSLVREGAWQGEIWNRRKNGEVFPEWLTISAVKDPAGQATHYVATFTDLSTRKSAEDQI 617 Query: 551 FQ 552 Sbjct: 618 KS 619 Score = 79.5 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 32/141 (22%), Positives = 55/141 (39%), Gaps = 1/141 (0%) Query: 294 RKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWP 353 ++ +E+E S GMA+ +G L+ N+A GYS E G + L+ Sbjct: 488 QRRQTEAELRIAAIAFESEQGMAITDPQGVMLRVNRAFSAITGYSAPEAVGQNPRLLSSG 547 Query: 354 EDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIED 413 + + E + E +NG+V L +S V+ G +++A D Sbjct: 548 RHDAAFYAAMWDSLVRE-GAWQGEIWNRRKNGEVFPEWLTISAVKDPAGQATHYVATFTD 606 Query: 414 INELKRTEQVNQQLMERITLA 434 ++ K E + L TL Sbjct: 607 LSTRKSAEDQIKSLAFYDTLT 627 >UniRef50_C7LTY3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LTY3_DESBD Length = 1075 Score = 672 bits (1734), Expect = 0.0, Method: Composition-based stats. Identities = 164/698 (23%), Positives = 294/698 (42%), Gaps = 23/698 (3%) Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFS-WDKRMFELYEIPPHIKPNWQ 473 +++ E +G+ ++E F +++ +L Sbjct: 381 RQVQERTAALSASERSFRAFFEMASVGVAQFEGDTRRFIKVNRKFSDLMGYSAAELGTLS 440 Query: 474 VWYECVLPEDRQHAEKVIRDSL-QSRSPFKLEFRITVKDGIRHI-RALANRVLNKEGEVE 531 + V P+D Q +E+ ++ + + + LE R K G A + + ++ E Sbjct: 441 P-RDLVHPDDWQASEEAMKSLVTKEQKEITLEKRYVRKGGGVFWGLATISPLWDQGEHPE 499 Query: 532 RLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWT 591 L + D+T K+ E L ++ E +V + I +NP ++G++ Sbjct: 500 SYLAVVRDITVAKKAEEKLL----LAAKVFENTVEGIVVTNTEGTIEQVNPGFTVITGYS 555 Query: 592 QEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPL 651 +EA+G + + + +++ T ++ + G SY +I+ + Sbjct: 556 ADEAVGSNPRILK--SDRHAQHFYQEMWTKLTQDGHWAGEIWNRRKDGESYPEWLTISAV 613 Query: 652 STLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTH 711 G V + D+TE ++ L Y A HDALT + NR +LR+ L + + Sbjct: 614 KNEAGQTTNYVSIFHDITELKRQQDALEYQAQHDALTGMPNRILLGDRLRMALAQLARSG 673 Query: 712 QRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD 771 + AL+F DLD FK +ND GH GD LL +L+ + +LRS D LARLGGDEF +LLP+ Sbjct: 674 GKLALLFFDLDNFKTINDGLGHGVGDELLVDLSRRLERLLRSGDTLARLGGDEFLILLPE 733 Query: 772 C-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACY 830 +V++A IATR++ A+ F + V AS G+T+ D+ ++A +++ AD+A Y Sbjct: 734 IESVDAASHIATRMLDALKA-PFHHGDVEYFVTASIGLTIAPDDGNEAPKLIKNADMAMY 792 Query: 831 ASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLW 890 +K+ GR + P+ A R +M + + I+ + + + I L Sbjct: 793 RAKSMGRNNYQYFTPEMDVAAHRRISMEYKLR-KAIEAQEFELFYQPLV--HIQSGHILG 849 Query: 891 LISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV-ASKGISISLPL 949 +L W CEG++I F + AL L V QA A +++S+ + Sbjct: 850 AEALIRWRCEGKLISPAEFIPLAEESALILPLGDWVLRTAAHQAKLWQDAGHDLTMSVNI 909 Query: 950 SVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQK----LRLAGCRIVL 1005 S S A L L E L ++ L P L+ I ++ + LR AG L Sbjct: 910 SSRQFSGADLAVTLREVLLDTELRPGRLYFEITESMLMGDVSKAETTLLNLREAGGTFFL 969 Query: 1006 SQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPV 1065 G + LK D L +D ++ + ++ I A+ L ++ +A V Sbjct: 970 DDFGTGYSSLSYLKRLPIDGLKIDRSFIKDITDDSDSRAIVAAIVSMARTLNLRIVAEGV 1029 Query: 1066 VLPLVMDTLSGIGVDLIYGEVIADAQP---LDLLVNSS 1100 L+ +G ++ G + + P + L++ Sbjct: 1030 ETQAQRGLLASMGPIVLQGYLASRPVPAQDFEALLSRD 1067 Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 65/317 (20%), Positives = 123/317 (38%), Gaps = 13/317 (4%) Query: 260 PRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALV- 318 + ++ + + T + + +S SE FR E +++G+A Sbjct: 353 TTLIALGVFLFVGTGITAMLFFFNTRLSRQVQERTAALSASERSFRAFFEMASVGVAQFE 412 Query: 319 GTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEK 378 G ++++ N+ +GYS EL L+ + L P+D + ++ L++ E ++EK Sbjct: 413 GDTRRFIKVNRKFSDLMGYSAAELGTLSPRDLVHPDDWQASEEAMKSLVTKEQKEITLEK 472 Query: 379 RYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAG 438 RY + G V W L +S + P ++A + DI K+ E+ + E Sbjct: 473 RYVRKGGGVFWGLATISPLWDQGEHPESYLAVVRDITVAKKAEEKLLLAAK----VFENT 528 Query: 439 GIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDR--QHAEKVIRDSLQ 496 GI + I + + +L DR QH + + L Sbjct: 529 VEGIVVTNTEGTIEQVNPGFTVITGYSADEAVGSNP---RILKSDRHAQHFYQEMWTKLT 585 Query: 497 SRSPFKLEFRITVKDGIRHIRALA-NRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKE 555 + E KDG + L + V N+ G+ + I D+TE+K+ +AL + + Sbjct: 586 QDGHWAGEIWNRRKDGESYPEWLTISAVKNEAGQTTNYVSIFHDITELKRQQDALEYQAQ 645 Query: 556 RLHITLDSIGEAVVCID 572 H L + ++ D Sbjct: 646 --HDALTGMPNRILLGD 660 >UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Magnetospirillum RepID=Q2W807_MAGSA Length = 880 Score = 672 bits (1734), Expect = 0.0, Method: Composition-based stats. Identities = 125/570 (21%), Positives = 233/570 (40%), Gaps = 19/570 (3%) Query: 542 EVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLL 601 E ++ +++ + ++ +D KI F+NP M+G+T EE +G Sbjct: 304 ERDAALLRSRKDLNLARKVIEASLDGIMIVDSTQKIEFVNPAFTHMTGYTAEEIIGKNPN 363 Query: 602 TVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGS 661 + + + +++Y+ ++ + ++ ++G Y +I + G Sbjct: 364 VLK--SGHHDETFYKHMYTVLEAQDYWQGEIWNRRKNGEIYPEWLTINVIRDDTGDITQY 421 Query: 662 VLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDL 721 + D+TE +K ++ A D LT L NR F +L+I + + Q+ A++F+DL Sbjct: 422 AAIFSDITERKKTEERIKNLAYFDVLTALPNRRLFTDRLQIAIANAHRHGQQLAIMFLDL 481 Query: 722 DRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN-VESARFI 780 D FK +NDS GH GD +L E A+ + +R D +ARLGGDEF +LLP+ + +E + Sbjct: 482 DLFKRINDSLGHGVGDQVLVETAARISHCVREGDTVARLGGDEFTVLLPELDHLEDVAKL 541 Query: 781 ATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRV 840 A R+I+ V F+ + V S GI + ++ ++ AD A Y +K+ GR Sbjct: 542 AERVIAHVKQ-PFLVDDNELYVTTSIGIAVYPEDGTTVEALIKNADTAMYRAKDLGRNSY 600 Query: 841 TVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCE 900 +Y A ER M + + + ++ + R + +L W Sbjct: 601 QLYTAAMNARSFERLTMESSLR-HALTREEFRLVYQ--VKVDSEDGRMSGVEALVRWHHP 657 Query: 901 G-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA--VASKGISISLPLSVAGLSSA 957 ++ F + + V +Q + + I++ +S Sbjct: 658 EMGLVSPVDFIPLAEAMGVISDIGEWVLRTACRQCKHWMDLGLPPVRIAVNVSAQQFVET 717 Query: 958 TLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESV----QKLRLAGCRIVLSQVGRDLQ 1013 + + L + LPP+ L L + ++ + V + LR G RI + G Sbjct: 718 DVPEVVARALRETGLPPQYLELELTETVLMQRVDEVVAVLKSLRAMGVRISIDDFGTGYS 777 Query: 1014 IFNSLKANMADYLLLDGELCANVQGN-----LMDEMLITIIQGHAQRLGMKTIAGPVVLP 1068 + LK D L +D ++ +++ I A L +K IA V P Sbjct: 778 SLSYLKRMPIDALKVDRSFVNDIFDGQSKVTEDGAEIVSTIINLAHNLKLKAIAEGVETP 837 Query: 1069 LVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 + L G D + G +I+ + L++ Sbjct: 838 EQAEFLRSKGCDEVQGYLISRPVSGEDLIS 867 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 64/173 (36%), Gaps = 4/173 (2%) Query: 265 MSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHF---RNAMEYSAIGMALVGTE 321 + + +L L + + A + + S R +E S G+ +V + Sbjct: 277 LVGLLSFSDILATLQYEYVHRLDEALKERDAALLRSRKDLNLARKVIEASLDGIMIVDST 336 Query: 322 GQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYY 381 + N A GY+ EE+ G L + + ++ + + + E Sbjct: 337 QKIEFVNPAFTHMTGYTAEEIIGKNPNVLKSGHHDETFYKHMYTVLEAQ-DYWQGEIWNR 395 Query: 382 NRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLA 434 +NG++ L ++++R G + A DI E K+TE+ + L L Sbjct: 396 RKNGEIYPEWLTINVIRDDTGDITQYAAIFSDITERKKTEERIKNLAYFDVLT 448 >UniRef50_C5V0L7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0L7_9PROT Length = 951 Score = 671 bits (1732), Expect = 0.0, Method: Composition-based stats. Identities = 152/695 (21%), Positives = 276/695 (39%), Gaps = 29/695 (4%) Query: 418 KRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP-HIKPNWQVWY 476 + Q+ + ++ A + G G WE +L +W + +F L+EI P P+ + + Sbjct: 248 TENIALQQRAQDFLSEAQKIGHFGSWELDLHSGRLNWSEEIFRLFEIDPAQFSPSHEAFL 307 Query: 477 ECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD-GIRHIRALANRVLNKEGEVERLLG 535 + PEDR+ + +SL ++ + + R+ + D ++ + A + + EG R G Sbjct: 308 SIIHPEDREAVNQAYTNSLTNKQSYHITHRLIMADGRVKWVEARGSNYFDPEGRAIRSAG 367 Query: 536 INMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEA 595 D+T E + + D EA++ D I +N E +G++++E Sbjct: 368 TVQDVT----FREEAATQLRIAAVAFD-TQEAIMVTDKEANIIKVNHSFELTTGFSEQEV 422 Query: 596 LGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLD 655 LG + + N ++++ + ++ ++G Y +IT + D Sbjct: 423 LGKNPRLL--GSGRHNQDFYKSMWEVLNRVGSWSGELWDRRKNGEIYPKWLTITAVKNRD 480 Query: 656 GSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHA 715 V V D+TE +K ++ A D LT L NR ++R+ L + A Sbjct: 481 -EISHYVGVFVDITERKKAEEEIHNLAFFDPLTQLPNRRLLLDRMRLALGLSARSKNFGA 539 Query: 716 LVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLP----- 770 L+FIDLD FK +ND+ GH GD +L E++ + LR +D +AR GGDEF +LL Sbjct: 540 LMFIDLDHFKVLNDTKGHEYGDKMLIEVSHRLTQSLRDTDSVARFGGDEFVVLLESLSVN 599 Query: 771 -DCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIAC 829 D V A IA ++ +++ +I E H S G+ L + + + E++ +AD+A Sbjct: 600 QDIAVAQAGSIAEKMRESLSQT-YIIESYAHESTPSIGVVLFNGDAIEIDELLKRADLAM 658 Query: 830 YASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNL 889 Y +K GR V +E A R M + + + ++ + + L Sbjct: 659 YQAKESGRNTVRFFESAMQATLESRTLMERALR-QALSNSEFELYYQVQTN---QANELL 714 Query: 890 WLISLKLWSCEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGI---SI 945 L W + I F L + V + + + Sbjct: 715 GAEVLLRWHSQSLGPISPAQFIPLAEQTKLILPIGEWVLENACARLKAWETHPTLSKLRL 774 Query: 946 SLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGC 1001 ++ +S V + L +S + PR L L + +L+ + + L+ G Sbjct: 775 AVNISPVQFHQPDFVRQVQAALTDSGVNPRRLELELTENLVLEDVDEAIQKMSALKALGV 834 Query: 1002 RIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTI 1061 R + G +K D L +D ++ + D M++ I G A+ G + I Sbjct: 835 RFSMDDFGTGYSSLQYIKRLPIDQLKIDQSFVRDILTDPGDAMMVQTIAGMARNFGYEVI 894 Query: 1062 AGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 A V + L G + G + L Sbjct: 895 AEGVEEHAQLLPLIERGCNTFQGYFFSRPVALAEF 929 Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 69/207 (33%), Gaps = 11/207 (5%) Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 F + PED Q ++ + +Y + R +G V W S +G + Sbjct: 306 FLSIIHPEDREAVNQAYTNSLTNK-QSYHITHRLIMADGRVKWVEARGSNYFDPEGRAIR 364 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWD--KRMFELYEI 464 ++D+ + RI I + + NI + + + Sbjct: 365 SAGTVQDVTFREEAATQL-----RIAAVAFDTQEAIMVTDKEANIIKVNHSFELTTGFSE 419 Query: 465 PPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVL 524 + N ++ +D K + + L + E K+G + + L + Sbjct: 420 QEVLGKNPRLLGSGRHNQD---FYKSMWEVLNRVGSWSGELWDRRKNGEIYPKWLTITAV 476 Query: 525 NKEGEVERLLGINMDMTEVKQLNEALF 551 E+ +G+ +D+TE K+ E + Sbjct: 477 KNRDEISHYVGVFVDITERKKAEEEIH 503 Score = 61.4 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 58/141 (41%), Gaps = 6/141 (4%) Query: 298 SESETHFR---NAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPE 354 E+ T R A + + + + E ++ N + G+S++E+ G + L Sbjct: 376 EEAATQLRIAAVAFD-TQEAIMVTDKEANIIKVNHSFELTTGFSEQEVLGKNPRLLGSGR 434 Query: 355 DLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDI 414 + + +++ + ++S E +NG++ L ++ V++ D +++ DI Sbjct: 435 HNQDFYKSMWEVL-NRVGSWSGELWDRRKNGEIYPKWLTITAVKNRD-EISHYVGVFVDI 492 Query: 415 NELKRTEQVNQQLMERITLAN 435 E K+ E+ L L Sbjct: 493 TERKKAEEEIHNLAFFDPLTQ 513 >UniRef50_Q3A017 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A017_PELCD Length = 847 Score = 671 bits (1732), Expect = 0.0, Method: Composition-based stats. Identities = 175/818 (21%), Positives = 319/818 (38%), Gaps = 33/818 (4%) Query: 300 SETHFR-------NAMEYSAIGMALVG-TEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 SE F+ ME S G+ ++ G ++ N A + LGYS EELR L Sbjct: 42 SEGTFQETGALHLAFMESSIDGIVIMDGASGGVVEANAAFAEMLGYSMEELRRLHVWDW- 100 Query: 352 WPEDLNKDLQQVEKLISGE-INTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQ 410 D ++ +I+ + E R+ ++G ++ ++ + ++ D L+ Sbjct: 101 ---DAQWSKDELRLIIANTGFSNQRFETRHRRKDGQILDVEISATKIQWLD--KLFVFCV 155 Query: 411 IEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKP-NIFSWDKRMFELYEIPPHIK 469 ++DI++ K +Q QQ + L E GI + + + + E+ P Sbjct: 156 VKDISQQKLQQQRLQQELTLWQLLMERSKGGIAVIDGETLKVLDVNPAFAEMLGYEPGEM 215 Query: 470 PNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGE 529 W R E S S + E + KDG N + G+ Sbjct: 216 LGMHPWEWDAC-RSRAQIESRAFSSQVSYEEYFFETIMKRKDGTLR-NVEVNSLPMMVGD 273 Query: 530 VERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSG 589 + + + D+TE + N+AL ++ ++ +A+V D ++ ++NPV E++ G Sbjct: 274 RKHVFCLCRDITERCEANKALLAREQDFRSLAENAPDAIVRYDRQLRRLYINPVLERLLG 333 Query: 590 WTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSIT 649 + LG P + +E + + +V G H Sbjct: 334 QDKATLLGKPFENHAPVDMTAYQDALEKTFQTGLQQVT---EVQYPLPDGTLGWFHARFE 390 Query: 650 PLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNS 709 P D + + +++D+TE + + A D LT L NRA FEK+ + S Sbjct: 391 PEFAEDATVKSVMGIVRDITELVEQRELAQHLAFTDMLTGLPNRALFEKRFKEAAAEAKS 450 Query: 710 THQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLL 769 T AL+ +DLD FK VNDS GH GD LLR++ + + + D +AR+GGDEF +LL Sbjct: 451 TDCPFALLMLDLDHFKDVNDSLGHNCGDELLRQVTARLSHCVNECDTIARMGGDEFAILL 510 Query: 770 PDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIA 828 + + A +A I+S + FI E + + S GI ++ E+ + AD A Sbjct: 511 AESRGSDEAGQVADLILSTLAQPFFI-ESQELFISGSIGIAFFPHDSANLDELFTYADTA 569 Query: 829 CYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARN 888 Y++K+ GR Y+ + S + ++ ++ ++L + + + R Sbjct: 570 MYSAKHKGRNNFQCYDQELTRHVSAKLSLGASLRY-ACVNHELQLYYQPKVQLK--DGRV 626 Query: 889 LWLIS-LKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAK--AVASKGISI 945 + + + L+ W ++ F + L + V Q A A+ + Sbjct: 627 VGVEALLRWWHPVLGMLTPDRFISIAEETGLIVEIGEWVLKTACQAAVDFNRNATAPFKV 686 Query: 946 SLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH----AESVQKLRLAGC 1001 ++ LS L + L+ + L I +++ A++++ LR G Sbjct: 687 AVNLSCRQFLQNDLAATIEAILKTTGCRGEWLECEITESLMIEDNPQVAKTLEALRSLGI 746 Query: 1002 RIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTI 1061 I + G N L D L +D ++ + L+ + L M+ + Sbjct: 747 TIAIDDFGTGYSALNYLSRFPIDVLKIDRSFINHIDTDPCKVGLVKVFIALGTNLEMQIV 806 Query: 1062 AGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNS 1099 A V +L +G L G + QP L+ + Sbjct: 807 AEGVETVSESASLQKLGCGLAQGYLFGKPQPFKALMAT 844 Score = 69.9 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 49/138 (35%), Gaps = 2/138 (1%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 K + E FR+ E + + + + L N L + LG + L G F+ Sbjct: 289 EANKALLAREQDFRSLAENAPDAIVRYDRQLRRLYINPVLERLLGQDKATLLGKPFEN-H 347 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 P D+ +EK + + E +Y +G + W D T + + Sbjct: 348 APVDMTAYQDALEKTFQTGLQQVT-EVQYPLPDGTLGWFHARFEPEFAEDATVKSVMGIV 406 Query: 412 EDINELKRTEQVNQQLME 429 DI EL ++ Q L Sbjct: 407 RDITELVEQRELAQHLAF 424 >UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q478F7_DECAR Length = 739 Score = 671 bits (1731), Expect = 0.0, Method: Composition-based stats. Identities = 132/697 (18%), Positives = 254/697 (36%), Gaps = 43/697 (6%) Query: 434 ANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVI-- 491 E G I I +++ ++ P + L ++ ++ Sbjct: 34 IFEHAGRAIILTNPDGLISYFNRAAQQMLGYTPEEVVGRETPLLFHLADEISACARLYSC 93 Query: 492 ---------------RDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGI 536 R L+ R + + + + + + +G V+ LGI Sbjct: 94 EPDGTPPAGFGVFISRLKLKIRDEADWTY-VRKDGSHLPVSLAVSVLRDAKGGVQGYLGI 152 Query: 537 NMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEAL 596 D++E +++ L + A++ D+ +I +N K++G++ EEA+ Sbjct: 153 ASDISERRRMEHDLR-----IAAIAFESQAAIMVTDVNQRILRVNQAFTKLTGYSAEEAI 207 Query: 597 GVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDG 656 G + + + ++ + + ++ ++G + +I+ + G Sbjct: 208 GQTPGMLK--SGRQDADFYAAMWCSLGQCGHWQGEIWNRRKNGEIFPEWLTISGVRDGRG 265 Query: 657 SNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHAL 716 V D++ + ++ + A +D LT + NR +L + + Q AL Sbjct: 266 KVTHYVSTFSDISNLKVAESEIHHLAFYDPLTAMPNRRLLLNRLDQACVSAKRSGQFGAL 325 Query: 717 VFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE- 775 + ID+D FK +ND+ GH GD LL E+A + + +R D AR GGDEF ++L + E Sbjct: 326 LIIDIDHFKTLNDTLGHDVGDHLLVEVARRLSACIREGDTAARQGGDEFVVMLEELGSEQ 385 Query: 776 -----SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACY 830 A +A +I + + + + AS GI+L ++ QADIA Y Sbjct: 386 EGAAVQAEIVAEKIRLELARPYLLNGDTEYFRSASIGISLFFGQEKTIDILLKQADIALY 445 Query: 831 ASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLW 890 +K+ GR + ++ ERA + + R + ++ ++ R + Sbjct: 446 KAKDAGRNAIRFFDTAMQTTLDERAELEAGLR-RALVRDEFVLYVQPQVD---AVRRLIG 501 Query: 891 LISLKLWSCEGE-IIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKG---ISIS 946 +L W G ++ F + L + V + + + + +S Sbjct: 502 AEALLRWQPPGRAMVAPNDFIPLAEETGLIVPIGIWVLDQACAELRRWADDPRSASLFLS 561 Query: 947 LPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRLAGCR 1002 + +S A V + + L PRLL L + +LD+ E +Q LR G R Sbjct: 562 VNVSARQFRQADFVAQVADALARHGANPRLLKLELTESLLLDNVEEVIEKMQALRTIGVR 621 Query: 1003 IVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIA 1062 L G + LK + L +D ++ N D ++ I L + +A Sbjct: 622 FSLDDFGTGYASLSYLKRFPFEQLKVDRSFIRDININPDDAAIVRAIIAMGNTLRLSVVA 681 Query: 1063 GPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNS 1099 V L L L G + D S Sbjct: 682 EGVEDDLQHAYLVKHECSLFQGYLFGRPMSFDDFRAS 718 Score = 95.7 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 87/266 (32%), Gaps = 28/266 (10%) Query: 306 NAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEK 365 + E++ + L +G N+A Q LGY+ EE+ G L L ++ + Sbjct: 33 SIFEHAGRAIILTNPDGLISYFNRAAQQMLGYTPEEVVGRETPLLFH---LADEISACAR 89 Query: 366 LISGEINTY------------------SMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYF 407 L S E + + Y ++G + LAVS++R G + Sbjct: 90 LYSCEPDGTPPAGFGVFISRLKLKIRDEADWTYVRKDGSHLPVSLAVSVLRDAKGGVQGY 149 Query: 408 IAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPH 467 + DI+E +R E RI I ++ I ++ +L Sbjct: 150 LGIASDISERRRMEHDL-----RIAAIAFESQAAIMVTDVNQRILRVNQAFTKLTGYSAE 204 Query: 468 IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA-NRVLNK 526 +D + SL ++ E K+G L + V + Sbjct: 205 EAIGQTPGMLKSGRQD-ADFYAAMWCSLGQCGHWQGEIWNRRKNGEIFPEWLTISGVRDG 263 Query: 527 EGEVERLLGINMDMTEVKQLNEALFQ 552 G+V + D++ +K + Sbjct: 264 RGKVTHYVSTFSDISNLKVAESEIHH 289 Score = 79.9 bits (196), Expect = 6e-13, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 57/144 (39%), Gaps = 4/144 (2%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQL- 350 +ER+ + A E A + + + L+ N+A + GYS EE G T L Sbjct: 157 SERRRMEHDLRIAAIAFESQA-AIMVTDVNQRILRVNQAFTKLTGYSAEEAIGQTPGMLK 215 Query: 351 TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQ 410 + +D + L G+ + E +NG++ L +S VR G ++++ Sbjct: 216 SGRQDADFYAAMWCSL--GQCGHWQGEIWNRRKNGEIFPEWLTISGVRDGRGKVTHYVST 273 Query: 411 IEDINELKRTEQVNQQLMERITLA 434 DI+ LK E L L Sbjct: 274 FSDISNLKVAESEIHHLAFYDPLT 297 >UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NQ51_9DELT Length = 751 Score = 670 bits (1730), Expect = 0.0, Method: Composition-based stats. Identities = 144/722 (19%), Positives = 278/722 (38%), Gaps = 19/722 (2%) Query: 387 VVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWE 446 + W +++ ++ G + I + R E ++ ER E IWE + Sbjct: 37 ISWDQESLTAMQTYKGWFYVAVTAILVFFLVLRAEYRFRRTEERFRNLTETSNDWIWEVD 96 Query: 447 LKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRD-SLQSRSPFKLEF 505 + ++ L P + ++ + + + S + + L Sbjct: 97 TSGSYTYVSPQVKTLLGYRPDEVIG-RTPFDFMPSGEAERVRDRFAAISAEQEAIINLVN 155 Query: 506 RITVKDGIRHIRALAN-RVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSI 564 + G R I + ++ G + GI+ D+T +QL E + + +++ Sbjct: 156 TNLHRQGRRVILETSGVPFYDQHGTWQGYRGIDRDITVRQQLEE----WLRQSAMVYENM 211 Query: 565 GEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTS 624 E V D A I +NP +++G+ ++E +G + + ++++ Sbjct: 212 WEGAVITDPAGTILDVNPAFSRITGYAKDEVIGKNPRILK--SDRHEQAFYQHMWRELIE 269 Query: 625 RSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASH 684 + ++ ++G Y SI+ +S G V V D+++ ++ +L A + Sbjct: 270 KGQWRGEIWNRRKNGEVYPEWLSISGVSDARGQTSYYVGVFTDLSQLKQSEAKLESLAYY 329 Query: 685 DALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELA 744 D LT L NR +L L+ + + FIDLD+F+ VN+S + AGD LL ++ Sbjct: 330 DPLTALPNRLLLHSRLEHALEWAERHQTKVGVYFIDLDQFRVVNESLSYQAGDQLLVMVS 389 Query: 745 SLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVG 803 LS LR D LAR GGDEF L+ + + A A ++++++ + G+ +G Sbjct: 390 KRFLSCLRVDDTLARPGGDEFVLIQEALADPQEATETARELLASLDQPFQLDGGQEIYLG 449 Query: 804 ASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQW 863 AS GIT+ + +++ A+ A Y +K GR R + Y Q A R M + + Sbjct: 450 ASIGITVFPGDGTTPPDLLKNAEAAMYHAKENGRNRFSFYAEQMNADALARLQMEMALR- 508 Query: 864 RMIKENQLMMLAHGVASPRIPEARNLWLISLKLWS-CEGEIIDEQTFRRSFSDPALSHAL 922 + ++ +L++ + +L W EGE+I F L A+ Sbjct: 509 QAVENRELLLYYQPQWQL-ADSPSVIGAEALIRWRNKEGELIAPDQFIPLAEKSGLIGAI 567 Query: 923 DRRVFHEFFQQA--AKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLI 980 V E +Q + K + +++ +S + L + + L +P L Sbjct: 568 GDWVIDEACRQLRIWRDQGKKQLRVAVNVSARQFRAGNLAEVVAQALRKHEIPAHCFELE 627 Query: 981 IPAEAIL----DHAESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANV 1036 + ++ + AE + + G I L G L L +D ++ Sbjct: 628 LTESILMEKPEEAAELLNRCAALGVGIALDDFGTGYSSLAYLSRFPITVLKIDRSFVRDL 687 Query: 1037 QGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 ++ I A R+G++ +A V L G DL G + + P + Sbjct: 688 NHRSEAALIADSIIALAHRMGLQVVAEGVETEEQRAYLQSRGCDLAQGFLFSPPLPAEQF 747 Query: 1097 VN 1098 Sbjct: 748 AE 749 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 64/438 (14%), Positives = 135/438 (30%), Gaps = 49/438 (11%) Query: 227 AVRLPRMEAFLIFLTTVMMVSLMMAA--DPSLLATPRTYLMSHMPWLPFLLILLPANIMT 284 A+RL + A L L++A D L +TY + +L+ Sbjct: 12 ALRLAAVYALFGLLWIFFSDRLVLAISWDQESLTAMQTYKGWFYVAVTAILVFFLVLRAE 71 Query: 285 MVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRG 344 ++++ E S + V T G + + + LGY +E+ G Sbjct: 72 YRFRRTEERFRNLT----------ETSNDWIWEVDTSGSYTYVSPQVKTLLGYRPDEVIG 121 Query: 345 LTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTP 404 T + + + + + + ++ +R G V + GT Sbjct: 122 RTPFDFMPSGEAERVRDRFAAISAEQEAIINLVNTNLHRQGRRVILETSGVPFYDQHGTW 181 Query: 405 LYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI 464 + DI ++ E+ +Q E + I + + Sbjct: 182 QGYRGIDRDITVRQQLEEWLRQSAMVYENMWEGA----VITDPAGTILDVNPAFSRITGY 237 Query: 465 PPHIKPNWQVWYECVLPEDR--QHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA-N 521 +L DR Q + + L + ++ E K+G + L+ + Sbjct: 238 AKDEVIGKNP---RILKSDRHEQAFYQHMWRELIEKGQWRGEIWNRRKNGEVYPEWLSIS 294 Query: 522 RVLNKEGEVERLLGINMDMTEVKQLNEALFQ-----------EKERLHITLDSIGE---- 566 V + G+ +G+ D++++KQ L + LH L+ E Sbjct: 295 GVSDARGQTSYYVGVFTDLSQLKQSEAKLESLAYYDPLTALPNRLLLHSRLEHALEWAER 354 Query: 567 -----AVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITF------GDNGPLM 615 V ID+ + +N +G + L+ L + GD L+ Sbjct: 355 HQTKVGVYFIDLD-QFRVVNESLSYQAGDQLLVMVSKRFLSCLRVDDTLARPGGDEFVLI 413 Query: 616 ENIYSADTSRSAIEQDVV 633 + + + ++++ Sbjct: 414 QEALADPQEATETARELL 431 >UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALY4_PELPD Length = 1238 Score = 669 bits (1726), Expect = 0.0, Method: Composition-based stats. Identities = 148/812 (18%), Positives = 299/812 (36%), Gaps = 30/812 (3%) Query: 296 HISESETHFRNAMEYSAIGMALVGTEGQWLQ-TNKALCQFL--GYSQEELRGLTFQQLTW 352 S+ R E + + + G L+ N + + L + + Sbjct: 432 AARASDAQ-RALFESIPLPLTVTSLSGHSLRHANGPALELFMPDQTAAGLESWSPFDVIA 490 Query: 353 PEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIE 412 E + L+ E N E W+ ++V V + L + Sbjct: 491 GE---NQRETFLSLLVEEKNIDEYELLLRLPGAPCFWSQVSVRPVSYQGEQALLTLFTPI 547 Query: 413 DINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNW 472 ++ + N++ + L + G + + + R F+ + + Sbjct: 548 NLRKHLEEGVRNEKAFSQAALDSLPGIFFMLGSDFR---ILSTNRNFDRFRETTSPGSPF 604 Query: 473 QVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVER 532 P+ R+ +++ + + + E + R I L +R+ GE + Sbjct: 605 SSIELHFPPDQREKIRSMVQGGFRRGAA-EAEVSLQGSS-SREIYLLTSRLFLLGGE-DC 661 Query: 533 LLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQ 592 L+ + +D++ ++ L E + E+++ D A +I +N +G+ Sbjct: 662 LITVGIDISARRRAEATL----ELWGRVFECTSESIMITDAAQRIVSVNQAFCATTGYRA 717 Query: 593 EEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLS 652 EE +G L + + +G ++ R + + + ++G + + Sbjct: 718 EEIIGQSSLALR--SDVHDGIYFRQLWRGIRKRGSWQGEFWCRHKNGEVSPQWMVVNTVH 775 Query: 653 TLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQ 712 G+ + + D++ + +++ + A HDALT+L NR ++L + LQ + + Sbjct: 776 DRQGTVTNYIALFTDISAQKSQEQRIQHIAHHDALTNLPNRLLCMERLILALQQAHRNGR 835 Query: 713 RHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC 772 A++FIDLD FK +NDS GH GD +L A+ + +R D ++RLGGDEF ++L D Sbjct: 836 HVAVIFIDLDHFKNINDSLGHHVGDCVLVTAANRLSMGVRDGDTVSRLGGDEFVIILADI 895 Query: 773 -NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYA 831 + I + + + G S GI++ ++ ++ AD A Y Sbjct: 896 EDSHQIEEIMKHRLLPLMRQPYDAGGYELHCSCSIGISIFPEDGLDKDTLLRNADTAMYR 955 Query: 832 SKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWL 891 +K GR Y + + +R ++ + + I+ N+L++ + L Sbjct: 956 AKEVGRNNYHFYTEELNSRAMQRLSIETSLR-KGIERNELLLHYQPKLDLH--TGKPYGL 1012 Query: 892 ISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA--VASKGISISLP 948 +L W + +I F + L + ++V +Q ++ V I +SL Sbjct: 1013 EALLRWQHPDHGMISPMEFIPIAEETGLIIPIGKQVIRNACRQLSRWSSVGMSHICLSLN 1072 Query: 949 LSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRLAGCRIV 1004 +S V DL++ + + P + L + +++ A ++ L+ G Sbjct: 1073 VSAVQFRDRRFVEDLVQLVREEGVSPHRIELELTETMLMEDAVRTIRVMETLKDEGFLFS 1132 Query: 1005 LSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGP 1064 + G N L D L +D + D +I I G L M+ IA Sbjct: 1133 IDDFGTGYSSLNYLHRFPIDCLKIDRSFIRGMLERPADLAIIKAIIGLGHTLDMQVIAEG 1192 Query: 1065 VVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 V L G D I G +A + + Sbjct: 1193 VEKEDEYRALRAAGCDGIQGYFVARPLTPEQV 1224 Score = 79.5 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 60/146 (41%), Gaps = 5/146 (3%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 + R+ + + E ++ + + + + N+A C GY EE+ G + L Sbjct: 670 SARRRAEATLELWGRVFECTSESIMITDAAQRIVSVNQAFCATTGYRAEEIIGQS--SLA 727 Query: 352 WPEDLNKDLQQVEKLISG--EINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIA 409 D++ + +L G + ++ E ++NG+V + V+ V GT +IA Sbjct: 728 LRSDVHDGI-YFRQLWRGIRKRGSWQGEFWCRHKNGEVSPQWMVVNTVHDRQGTVTNYIA 786 Query: 410 QIEDINELKRTEQVNQQLMERITLAN 435 DI+ K EQ Q + L N Sbjct: 787 LFTDISAQKSQEQRIQHIAHHDALTN 812 >UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZD9_9PROT Length = 1149 Score = 668 bits (1724), Expect = 0.0, Method: Composition-based stats. Identities = 167/875 (19%), Positives = 319/875 (36%), Gaps = 79/875 (9%) Query: 289 AFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQ 348 R + +++S + R ++ + +G +G + + + L G Sbjct: 282 QIRLRTQQLADSSSQLRATLDAIPDLLFEIGLDGHFYSYHSSRNDLLTAPATSFIGKKIG 341 Query: 349 QLTWPEDLNKDLQQVEKL-ISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYF 407 + P+ + + +++ ++G N + G+ W L++S + F Sbjct: 342 DVLPPDAADICMSALQEANMTGRSNGKTYALSL--PQGES-WFELSISKKQDAKNQAPRF 398 Query: 408 IAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIF---------SWDKRM 458 I + D+ + K E +L + ++ I K +F +M Sbjct: 399 IVLVRDVTQRKVNETHILRLTKLYAALSQC-NQAIVRCSNKTELFPIICRDAVNFGGMKM 457 Query: 459 FEL---------------YEIPPHIKPNWQVWYE-----------CVLPEDRQHAEKVI- 491 + Y N V + L EDR + Sbjct: 458 AWIGILDQVTGLVEPVASYGAGTEYLDNLHVSIDGHEPGGSGPTGIALREDRPFWCQDFA 517 Query: 492 ---------RDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVER--LLGINMDM 540 + + + + L N E R LL + MD+ Sbjct: 518 NDPVTAVWHERAAEYGWGASASIPLHCHGIVVGTLTLYAEEKNAFDEPARNLLLEMAMDI 577 Query: 541 ----------TEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGW 590 TE K+++E L + L + ++ ++V D+ I + N K++G+ Sbjct: 578 SFALERFDAETERKKMSETLLK----LSLAVEQSPNSIVITDLDANIEYANSNFTKVTGY 633 Query: 591 TQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITP 650 + +E LG + E++++ T + ++ + G Y I+P Sbjct: 634 SLDEVLGKNPR--FMQSGKTPKATYEDMWAHLTRGEPWKGELFNRRKDGTEYIESVLISP 691 Query: 651 LSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNST 710 +S +DG + + + +D+TE R ++ D LT L NR ++ + L + Sbjct: 692 VSQVDGRVMNYLAIKEDITEKRLTEERIEKLEHFDHLTGLPNRTQLNERFKYALSLAQRS 751 Query: 711 HQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLP 770 ++ ++F+DLD FK +ND+ GH+ GD LL ++A + LR D ++R GGDEF L+LP Sbjct: 752 GEQMTVMFLDLDHFKDINDTLGHSIGDQLLMDVAKRLKETLRDEDTVSRQGGDEFILILP 811 Query: 771 DCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACY 830 + A +A +++ AV+ F +E S GI + + + AD A Y Sbjct: 812 GTDENGAAHVAAKLMEAVSQA-FQFEQHELVATCSIGIAIYPHDGENFETLSKNADTAMY 870 Query: 831 ASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLW 890 K+ GR + + A HS R + + QL + S + + + Sbjct: 871 RVKHDGRNGFCFFTSEMQA-HSARTLQLGNALRHALTRGQLHLHYQPQISTQ--DGHVVG 927 Query: 891 LISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS--KGISISL 947 +L W E I F D + V +Q + S + +++ Sbjct: 928 AEALLRWQHPELGSISPAEFIPIAEDNGQIIPIGEWVLRTAIKQLKDWMDSGLPPMIMAV 987 Query: 948 PLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRI 1003 LS A + L+ + L+ S +P R L L + +D + + KL G ++ Sbjct: 988 NLSAAQFRQSNLMELVTSILDESKVPHRYLELELTEAVAMDDPQLAIGVMDKLHTGGIKM 1047 Query: 1004 VLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAG 1063 + G + LK L +D ++ + D+ ++ I A LGM+TIA Sbjct: 1048 SIDDFGTGYSSLSYLKRFKVYKLKIDQSFVHDITDDPDDKAIVAAIINMASSLGMQTIAE 1107 Query: 1064 PVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 V + L G + + G + P + V+ Sbjct: 1108 GVETAGQLSFLRLQGCNEVQGYYFSKPLPAEQFVS 1142 Score = 42.9 bits (100), Expect = 0.066, Method: Composition-based stats. Identities = 17/157 (10%), Positives = 58/157 (36%), Gaps = 2/157 (1%) Query: 413 DINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNW 472 +++ Q ++ +A ++E L + +S+ +L P Sbjct: 279 MRKQIRLRTQQLADSSSQLRATLDAIPDLLFEIGLDGHFYSYHSSRNDLLTAPATSFIGK 338 Query: 473 QVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVER 532 ++ + + P+ ++++ + + +++ G ++ + + + R Sbjct: 339 KI-GDVLPPDAADICMSALQEANMTGRSNGKTYALSLPQGESWFELSISKKQDAKNQAPR 397 Query: 533 LLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVV 569 + + D+T+ K + + + L+ L +A+V Sbjct: 398 FIVLVRDVTQRKVNETHILRLTK-LYAALSQCNQAIV 433 >UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJ77_9PROT Length = 1399 Score = 668 bits (1723), Expect = 0.0, Method: Composition-based stats. Identities = 146/701 (20%), Positives = 277/701 (39%), Gaps = 35/701 (4%) Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHI---KPN 471 E ++ EQ ++ + GI + + I ++ ++ H K Sbjct: 697 AERRQVEQALRESEALKASVLASAACGIVATDPQGLITVFNPGAEAIFGYAAHEVVGKVT 756 Query: 472 WQVWYECV--------LPEDR-----QHAEKVIRDSLQSRSPFKLEFRITVKDGIRH-IR 517 +W++ L D + ++ + S + E KDG R IR Sbjct: 757 PTLWHDAEEIAAAAVALSRDLGCRVEAGFDALVARARCSGQVDERETAGVRKDGRRITIR 816 Query: 518 ALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKI 577 + + +G + LG +D+T KQ L + + GE + D A I Sbjct: 817 LAVTVMRDAQGALAGYLGTIVDITAQKQAAAQLNLAAK----VFEQGGEGIAITDAACNI 872 Query: 578 TFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCR 637 +N +++G+++ E LG + + + ++++ + S + ++ + Sbjct: 873 VMINQAFTRITGYSEVEVLGRNPSLL--ASGRHDQAFYQSMWESIESLGHWQGEIWNRRK 930 Query: 638 SGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFE 697 G Y I+ + DG+ + D+T+ ++ + A DALT L NR+ E Sbjct: 931 DGSVYPEWLLISRV-DGDGAPTHYIGTFIDITQHKEAEASIQRLAHFDALTGLPNRSLLE 989 Query: 698 KQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVL 757 +++R L + + AL+F+DLDRFK VNDS GH GDALL ++A + +R D + Sbjct: 990 ERVRHDLARAHRGREALALMFVDLDRFKNVNDSLGHRVGDALLIQVAERLRRAVRDEDTV 1049 Query: 758 ARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQ 817 +RLGGDEF ++LP + + A +A +++ + + E SAGI + + Sbjct: 1050 SRLGGDEFIVVLPSTDADGAAHVAAKLLEVMA-PAYRIEQHELTCSLSAGIAMYPADGES 1108 Query: 818 AAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHG 877 + AD A Y +K GR + + + + D + R ++ +L + Sbjct: 1109 FEALSMSADTAMYRAKQSGRNAYCFFTAEMQERSARNLQIENDLR-RALENGELRLHYQP 1167 Query: 878 VASPRIPEARNLWLISLKLWSCEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAK 936 + + R + +L W ++ F + L + V Q Sbjct: 1168 --QFTLADRRLVGAEALLRWQHPQLGMVSPVEFIPIAEECGLILPIGEWVLRAAVSQLRV 1225 Query: 937 AVAS--KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA---- 990 +++++ LS A+L + + L+ L + L L + +D+ Sbjct: 1226 WQQEGLPPMTVAVNLSAVQFRQASLTDVVSRILDAEGLAAQFLELELTESVAMDNPLAAI 1285 Query: 991 ESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQ 1050 ++ KLR G R+ + G + LK L +D A++ + DE ++T Sbjct: 1286 ATMDKLRALGVRMSIDDFGTGYSSMSYLKRFRVHKLKIDRSFVADLAADPEDEAIVTATI 1345 Query: 1051 GHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQ 1091 A+ LG++TIA V + L G D G + + Sbjct: 1346 SLARDLGLQTIAEGVESEAQLAFLRAKGCDEAQGYLFSRPL 1386 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 91/585 (15%), Positives = 167/585 (28%), Gaps = 73/585 (12%) Query: 160 VLSESIGALALVPLGLLFKPHYLLRHRNPRLLFESLLTLAITLTLSWLSM------LYLP 213 L ++ A +LV LL L R R AI L L + + P Sbjct: 260 YLGYALLAGSLVGALLLIWVVTLRRLVRQRTATLEATLDAIPDPLFELGLDGRYHDCHTP 319 Query: 214 WPFTFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPF 273 L + T + + A S L W Sbjct: 320 RADLLAAPPDALIGRLLTDVLPAAAAATCLSALREAQATGHSAGQQFELPLRGGNFWFEL 379 Query: 274 LLILLPANIMTM-VMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALC 332 + P + + +E R A E + + + L+ + ++ Sbjct: 380 SVARKPTGVGREPRFVVLARDISERKRAEARLRMATEATQLVFWELDLLSDQLRYDTSML 439 Query: 333 QFLGYSQEELRGLT--FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWA 390 Q LG E G T +L P+ + ++ +S E + +G+ VW Sbjct: 440 QVLGLDHGEDPGSTGALMELVHPDHRAALTESFRAAMASAEPVFSFEHQIVTHSGEGVWL 499 Query: 391 LLAVSLV-RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELK- 448 + R G + + +I + KR E + E++ + A E ++ Sbjct: 500 QTRGRVAQRDAAGRAVLAVGTAMNITDRKRAEAALLRRSEQLVQLSAASQEINSELDIPV 559 Query: 449 ------------------------------------PNIFSWDKRMFELYEIPPHIKPNW 472 + D R Y +P + Sbjct: 560 ILRQLIAAALKVTGAGGGAAARIAGGQMVFAEYNRGGQLLPVDYRFSPGYGVPGRVMQTR 619 Query: 473 QVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVER 532 D IR ++ + + + +G+V Sbjct: 620 SFHLSNDAEHD-PWVIPEIRQAIGFDCLLDMPIISRHGELLGCFEIHNKPGGFGDGDVRL 678 Query: 533 LLGINMD----------MTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNP 582 L G+ + E +Q+ +AL + + L S +V D IT NP Sbjct: 679 LHGLAASAAVALENSALLAERRQVEQALRESEALKASVLASAACGIVATDPQGLITVFNP 738 Query: 583 VAEKMSGWTQEEALGVPLLTVLHIT----------FGDNGPLMENIYSADTSRSAI---- 628 AE + G+ E +G T+ H D G +E + A +R+ Sbjct: 739 GAEAIFGYAAHEVVGKVTPTLWHDAEEIAAAAVALSRDLGCRVEAGFDALVARARCSGQV 798 Query: 629 -EQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESR 672 E++ + G + ++T + G+ G + I D+T + Sbjct: 799 DERETAGVRKDGRRITIRLAVTVMRDAQGALAGYLGTIVDITAQK 843 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 59/412 (14%), Positives = 135/412 (32%), Gaps = 33/412 (8%) Query: 284 TMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELR 343 + ++ R + + ESE + + +A G+ +G N GY+ E+ Sbjct: 693 SALLAERRQVEQALRESEALKASVLASAACGIVATDPQGLITVFNPGAEAIFGYAAHEVV 752 Query: 344 GLTFQQLTWPE------------DL----NKDLQQVEKLISGEINTYSMEKRYYNRNGDV 387 G L DL + E ++G Sbjct: 753 GKVTPTLWHDAEEIAAAAVALSRDLGCRVEAGFDALVARARCSGQVDERETAGVRKDGRR 812 Query: 388 VWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWEL 447 + LAV+++R G ++ I DI ++ + E GG GI + Sbjct: 813 ITIRLAVTVMRDAQGALAGYLGTIVDIT----AQKQAAAQLNLAAKVFEQGGEGIAITDA 868 Query: 448 KPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRI 507 NI ++ + D Q + + +S++S ++ E Sbjct: 869 ACNIVMINQAFTRITGYSEVEVLGRNPSLLASGRHD-QAFYQSMWESIESLGHWQGEIWN 927 Query: 508 TVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEA 567 KDG + L ++ +G +G +D+T+ K+ ++ + D++ Sbjct: 928 RRKDGSVYPEWLLISRVDGDGAPTHYIGTFIDITQHKEAEASIQR-----LAHFDALTGL 982 Query: 568 VVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYS--ADTSR 625 + ++ +A G + V L ++ + + + A+ R Sbjct: 983 PNRSLLEERVRH--DLARAHRGREALALMFVDLDRFKNVNDSLGHRVGDALLIQVAERLR 1040 Query: 626 SAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQ 677 A+ + + G + V + P + DG+ + +++ + + ++ + Sbjct: 1041 RAVRDEDTVSRLGGDEFIV---VLPSTDADGAAHVAAKLLEVMAPAYRIEQH 1089 Score = 56.8 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 31/266 (11%), Positives = 79/266 (29%), Gaps = 10/266 (3%) Query: 421 EQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVL 480 ++ +Q + +A ++E L +L PP ++ + + Sbjct: 283 RRLVRQRTATLEATLDAIPDPLFELGLDGRYHDCHTPRADLLAAPPDALIG-RLLTDVLP 341 Query: 481 PEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDM 540 +R++ + +F + ++ G R G R + + D+ Sbjct: 342 AAAAATCLSALREAQATGHSAGQQFELPLRGGNFWFELSVARKPTGVGREPRFVVLARDI 401 Query: 541 TEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPL 600 +E K+ L + ++ +D+ + ++ G E G Sbjct: 402 SERKRAEAR-------LRMATEATQLVFWELDLLSDQLRYDTSMLQVLGLDHGEDPGSTG 454 Query: 601 LTVLHITFGDNGPLMENIYSADTS-RSAIEQDVVLHCRSGGSYDVHYSI-TPLSTLDGSN 658 + + L E+ +A S + + SG + G Sbjct: 455 ALMELVHPDHRAALTESFRAAMASAEPVFSFEHQIVTHSGEGVWLQTRGRVAQRDAAGRA 514 Query: 659 IGSVLVIQDVTESRKMLRQLSYSASH 684 + +V ++T+ ++ L + Sbjct: 515 VLAVGTAMNITDRKRAEAALLRRSEQ 540 >UniRef50_C1DB08 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DB08_LARHH Length = 1092 Score = 666 bits (1719), Expect = 0.0, Method: Composition-based stats. Identities = 173/821 (21%), Positives = 332/821 (40%), Gaps = 41/821 (4%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 + + H E++ + S+ MA + TEG + ALC L +E+RG ++L Sbjct: 281 SRQLHAEEAQRRLEGIVAASSDAMAFIDTEGLVGFASPALCHLLSIGTQEVRGRQLEELL 340 Query: 352 WP-EDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQ 410 + + +Q +E ++G M+ G V + R+T+G + + Sbjct: 341 AAYANRRELMQGIEGALAGR--NLRMQTWLTLPGGGVRCLESSFDPYRNTEGQVVGAVCV 398 Query: 411 IEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPH--- 467 + D+ + R + +Q A IG W ++ ++ ++ EL I Sbjct: 399 LRDMTDNARKTLLFEQAE-------RAAQIGGWMLDIDADVLDLSQQARELLNIAADRQQ 451 Query: 468 --IKPNWQVWYECVLPEDRQHAEKVIRDSLQ-SRSPFKLEFRITVKDGIRHIRALANRVL 524 + + E + R S + + + G+R AL+ R L Sbjct: 452 VPLAEVMAQFDEATFK-KAGRLLEAFRHSHSVATHEIHFDAVLVTPHGVRRRLALSARTL 510 Query: 525 NKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVA 584 G+ + G D+T +++ L + + EAV D + +I +NP Sbjct: 511 QVVGQGHYVTGSVQDVTSLRRAERELMLSAQ----VFEHGSEAVFITDASHRILRVNPAF 566 Query: 585 EKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDV 644 E ++G+ E LG+ G + + + ++V RSG Y Sbjct: 567 EAITGYAAGEVLGLTPD--FRCVSSPGGTSISQRWELAEQTGRWQGEIVCRRRSGEHYYE 624 Query: 645 HYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILL 704 +++ + +GS + + D++ + + A D LT L NR+ +L+ +L Sbjct: 625 WSALSVVRHANGSVLYFIGQFSDISAVKAAEARALRLACFDPLTGLPNRSLLFDRLQEVL 684 Query: 705 QTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDE 764 N A++F DLDRFK +NDS GH GDA+L+E+A +++ +R D + R GGDE Sbjct: 685 ---NREPHNGAVLFCDLDRFKNINDSLGHTLGDAVLKEVARRLVARVRPGDTVCRYGGDE 741 Query: 765 FGLLLPDCNVESA-RFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMS 823 F L+LP + +A ++++ V+ + +G RV S G+ + + + ++ Sbjct: 742 FVLVLPGLSDCVVLEQLAEQLLADVSS-PILLDGLDLRVTPSLGVAVFPRDGNDCDALLR 800 Query: 824 QADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWR-MIKENQLMMLAHGVASPR 882 AD A Y +K+ GR + + SE + ++ R ++ + + Sbjct: 801 HADAALYHAKSRGRNTYRFFTREIDDRVSE--YLHIEHGLRSALERGEFELHYQPQVD-- 856 Query: 883 IPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQA--AKAVA 939 + R + + +L W E +I F + L + V E +QA + Sbjct: 857 MAFGRVVGVEALLRWKHPEQGMISPVRFVPIAEETGLIVPIGMWVIREACRQAMLWRRAG 916 Query: 940 SKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQK 995 + +++++ LS S +++ + E L +S L PR L + + I++ + ++ Sbjct: 917 LRPMTMAVNLSGRQFSR-SVIEAIDEALADSGLDPRWLQVEVTESVIMEDTQEAYTVLEA 975 Query: 996 LRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQR 1055 LR G + + G LK D L +D ++ + + +++ I G A Sbjct: 976 LRARGLTVAVDDFGTGYSSLAYLKRFPIDKLKIDRSFIRDIDLDEDNPVIVDAIIGMAHN 1035 Query: 1056 LGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 L +K +A V D L G D + G +++ QP L Sbjct: 1036 LRIKVLAEGVETRAQWDYLRQQGCDEVQGYLVSRPQPAAAL 1076 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 68/379 (17%), Positives = 143/379 (37%), Gaps = 16/379 (4%) Query: 302 THFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT----FQQLTWPED-- 355 ++R A+ + G+ V G + N + + EL +T ++ LT + Sbjct: 32 EYYRTALAHLNEGVLFVSPSGCMVPGNPEAVRIIAVPSAELSHVTREGEWETLTENGEPL 91 Query: 356 LNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRH-TDGTPLYFIAQIEDI 414 D +GE + +V W + + V P+ + DI Sbjct: 92 AMADRPGARACFAGETVERQVVGMRRPGAAEVQWLRMNAAPVYQPEQQEPVGAVVTFVDI 151 Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQV 474 ++ ++ Q++ R E G +++++ ++ + ++Q Sbjct: 152 TRERQRQESLQRMEARWQALFETSGDVAYDFDVATRRLELAPAWMQMLGLGRMPDDHYQD 211 Query: 475 WYECVLPEDRQHAEKVIRDSLQSRS-PFKLEFRITVKDGIR-HIRALANRV-LNKEGEVE 531 W E V P+ R E + LQ + + +E+ + + G H+ + +G+ Sbjct: 212 WLERVDPQVRDDVEAALCAHLQGETADYSVEYPLLHESGDWLHVFERGRVYQRDADGKPL 271 Query: 532 RLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWT 591 R+ G+ +D++ EA + L + + +A+ ID + F +P + Sbjct: 272 RMHGVIIDLSRQLHAEEAQRR----LEGIVAASSDAMAFIDTEGLVGFASPALCHLLSIG 327 Query: 592 QEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPL 651 +E G L +L + + LM+ I A R+ + L GG + S P Sbjct: 328 TQEVRGRQLEELL-AAYANRRELMQGIEGALAGRN-LRMQTWLTLPGGGVRCLESSFDPY 385 Query: 652 STLDGSNIGSVLVIQDVTE 670 +G +G+V V++D+T+ Sbjct: 386 RNTEGQVVGAVCVLRDMTD 404 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 74/413 (17%), Positives = 146/413 (35%), Gaps = 22/413 (5%) Query: 280 ANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQ 339 A + + + R ++ + E ++ E S + L+ A Q LG + Sbjct: 144 AVVTFVDITRERQRQESLQRMEARWQALFETSGDVAYDFDVATRRLELAPAWMQMLGLGR 203 Query: 340 -EELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLV- 397 + + + P+ + + + GE YS+E + +GD + + Sbjct: 204 MPDDHYQDWLERVDPQVRDDVEAALCAHLQGETADYSVEYPLLHESGDWLHVFERGRVYQ 263 Query: 398 RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKR 457 R DG PL I D++ E+ R+ A + + + + Sbjct: 264 RDADGKPLRMHGVIIDLSRQLHAEEA----QRRLEGIVAASSDAMAFIDTEGLVGFASPA 319 Query: 458 MFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVK-DGIRHI 516 + L I Q+ +R+ + I +L R+ +++ +T+ G+R + Sbjct: 320 LCHLLSIGTQEVRGRQLEELLAAYANRRELMQGIEGALAGRN-LRMQTWLTLPGGGVRCL 378 Query: 517 RALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMK 576 + + N EG+V + + DMT+ + Q + + +D+ Sbjct: 379 ESSFDPYRNTEGQVVGAVCVLRDMTDNARKTLLFEQAER-------AAQIGGWMLDIDAD 431 Query: 577 ITFMNPVAEKMSGWTQEEALGVPLLTVL----HITFGDNGPLMENIYSADTSRSA-IEQD 631 + ++ A ++ + VPL V+ TF G L+E + + + I D Sbjct: 432 VLDLSQQARELLNIAADR-QQVPLAEVMAQFDEATFKKAGRLLEAFRHSHSVATHEIHFD 490 Query: 632 VVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASH 684 VL G + S L + G +QDVT R+ R+L SA Sbjct: 491 AVLVTPHGVRRRLALSARTLQVV-GQGHYVTGSVQDVTSLRRAERELMLSAQV 542 >UniRef50_Q31EA2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Piscirickettsiaceae RepID=Q31EA2_THICR Length = 1289 Score = 666 bits (1719), Expect = 0.0, Method: Composition-based stats. Identities = 178/837 (21%), Positives = 333/837 (39%), Gaps = 32/837 (3%) Query: 277 LLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLG 336 ++ + + A + K + E + + S IG E + ++ C LG Sbjct: 451 VVSFLFLARDVTARVQQSKELVEKDERLELILSASKIGQWDWDIESNVMLWDERSCTMLG 510 Query: 337 YSQEE--LRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAV 394 Y E + + L P+D +++++ + + YS+E R + + D VW Sbjct: 511 YPPEAFKMDYDKWASLLHPDD-AYVMKRLKAHLE-KGEAYSVEYRIRSGDDDWVWVESQG 568 Query: 395 SLVR-HTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFS 453 + G P+ + DI + KR+E + + ER+ E IGI + + I Sbjct: 569 QTIESDAKGRPIRMVGIYMDITDRKRSEDLLVENEERLRTIFEILPIGITLTDREGQIVE 628 Query: 454 WDKRMFELYEIP--PHIKPNWQVWYECVLPED---RQHAEKVIRDSLQSRSPFKLE-FRI 507 + L IP H+ + + D E SL ++ K + ++ Sbjct: 629 CNSASEVLLGIPREEHLARKYDAKEWTIYRADGTAMPSEEYAAVRSLTNQETIKNQVMKV 688 Query: 508 TVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEA 567 + A + + ++ +D+++ +Q E L E Sbjct: 689 CHSGDCTWLNVSATPLNHPN---YGVVVTYIDISDKRQAEERLN----LAASVFTHAREG 741 Query: 568 VVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSA 627 ++ D +I +N +++G+ +EE LG+ + + + ++ Sbjct: 742 IMITDKHARILDVNKGFTQITGYEREEVLGLNPNIL--NSGCQSKEFYNLMWKTLFEEGH 799 Query: 628 IEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDAL 687 ++ ++G Y +IT + DG + + D+T ++ RQL + A +DAL Sbjct: 800 WSGEIWNRNKNGTVYPQMITITAIKNSDGMTQNYLALFTDITSLKEQQRQLEHIAHYDAL 859 Query: 688 THLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLM 747 T L NR+ +L+ + + A++FIDLD FK VND GH AGD LL EL+ M Sbjct: 860 TQLPNRSLLADRLQQAIFASQRHNSLLAVLFIDLDGFKKVNDLHGHDAGDELLVELSKRM 919 Query: 748 LSMLRSSDVLARLGGDEFGLLLPDCNVE-SARFIATRIISAVNDYHFIWEGRVHRVGASA 806 ++LR D LAR+GGDEF ++L + + I R++ + ++ EG V V AS Sbjct: 920 KNILREEDTLARIGGDEFIVVLVNLDAPSDCEMILRRLLESTSE-SVDIEGEVVSVSASI 978 Query: 807 GITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMI 866 G+T +N A +M AD A Y +K G+ R ++ Q + ++A+ +E + Sbjct: 979 GVTFYPKDNVDADLLMRHADQAMYQAKQSGKNRYHYFDVQMDSMLQSQSAIQ-NEIQDAL 1037 Query: 867 KENQLMMLAHGVASPRIPEARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRR 925 + + + + + + + + +L W+ ++ F + S LD+ Sbjct: 1038 NKGEFELYYQPKVN--LAQNIVIGVEALIRWNHPKKGLLVPIEFLPFIENHPFSVELDQW 1095 Query: 926 VFHEFFQQAAKAVASK-GISISLPLSVAGLSSATLVNDLLEQLEN-SPLPPRLLHLIIPA 983 V +Q ++ A +SIS+ +S L + L L S LP L + + Sbjct: 1096 VMETALKQMSEWRAQSLEMSISVNVSAYFLQQKNFIQILERLLSQYSDLPKFSLEIEVLE 1155 Query: 984 EAILDHAESVQKL----RLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGN 1039 L++ ++ L R G L G L+ A + +D ++ + Sbjct: 1156 TTALENISNISDLVHICRDMGVNFALDDFGTGYSSLMYLRHLPARTIKIDKSFVRDMLVD 1215 Query: 1040 LMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 + D +I I A + IA V + L +G + + G IA P D + Sbjct: 1216 MDDRAIIDGILKLASVFNREVIAEGVETVAHFEALLDMGCEQVQGYGIARPMPADQV 1272 Score = 181 bits (461), Expect = 1e-43, Method: Composition-based stats. Identities = 90/441 (20%), Positives = 176/441 (39%), Gaps = 25/441 (5%) Query: 262 TYLMSHMPWLPFLLILLPAN----------IMTMVMYAFRAERKHISESETHFRNAMEYS 311 TY +P LI+ P + + R ++ + E+ ++ Sbjct: 301 TYARKDGVLVPVSLIVTPILDENHQKVGYLGVAQDVTELRRSQQALIEARNQLEATLDTI 360 Query: 312 AIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEI 371 + V EG L + A + L E+ G ++ P+ + + + + Sbjct: 361 PDLLFEVDKEGCILNFHTADIEKLYLKPEQFVGKRVNEVL-PDSVGDVI--FQAMAEALE 417 Query: 372 NTYSMEKRY-YNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMER 430 S Y +NG L+VS + + F+ D+ + + + ER Sbjct: 418 TGRSQGLEYSLAQNGKQSCYELSVSTKINQKNEVVSFLFLARDVTARVQQSKELVEKDER 477 Query: 431 ITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPH-IKPNWQVWYECVLPEDRQHAEK 489 + L A IG W+W+++ N+ WD+R + PP K ++ W + P+D + K Sbjct: 478 LELILSASKIGQWDWDIESNVMLWDERSCTMLGYPPEAFKMDYDKWASLLHPDD-AYVMK 536 Query: 490 VIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVL--NKEGEVERLLGINMDMTEVKQLN 547 ++ L+ + +E+RI D + + + +G R++GI MD+T+ K+ Sbjct: 537 RLKAHLEKGEAYSVEYRIRSGDDDWVWVESQGQTIESDAKGRPIRMVGIYMDITDRKRSE 596 Query: 548 EALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHIT 607 + L + +ERL + + + D +I N +E + G +EE L Sbjct: 597 DLLVENEERLRTIFEILPIGITLTDREGQIVECNSASEVLLGIPREEHLARKYDAKEWTI 656 Query: 608 FGDNGPLM----ENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVL 663 + +G M + T++ I+ V+ C SG ++ S TPL + N G V+ Sbjct: 657 YRADGTAMPSEEYAAVRSLTNQETIKNQVMKVCHSGDCTWLNVSATPL---NHPNYGVVV 713 Query: 664 VIQDVTESRKMLRQLSYSASH 684 D+++ R+ +L+ +AS Sbjct: 714 TYIDISDKRQAEERLNLAASV 734 Score = 155 bits (392), Expect = 9e-36, Method: Composition-based stats. Identities = 73/446 (16%), Positives = 166/446 (37%), Gaps = 26/446 (5%) Query: 256 LLATPRTYLMSHMPWLPFLLIL------LPANIMTMVMYAFRAERKHISESETHFRNAME 309 LL T L +L+L + + + + + + + T N M+ Sbjct: 157 LLQLQETELKESQERQSLILVLAVFTQAILILFLFYDISRRKQLQAELKQVATTLTNIMD 216 Query: 310 YSA-IGMALVGTEGQWLQTNKALCQFLGYSQEELRGL-TFQQLTWPEDLNKDLQQVEKLI 367 S + + TEG + N + LGYS +EL G T + +++ Q++ + + Sbjct: 217 SSTEVAVIATDTEGVITEFNSGAEKLLGYSAQELVGKETPLKFHSEKEIQARAQRLSEAL 276 Query: 368 SGEINTYSM-------------EKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDI 414 + + + E Y ++G +V L V+ + + + ++ +D+ Sbjct: 277 KRPVKGFQVFTEKLKEDSPQDHEWTYARKDGVLVPVSLIVTPILDENHQKVGYLGVAQDV 336 Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQV 474 EL+R++Q + ++ + ++E + + I ++ E + P +V Sbjct: 337 TELRRSQQALIEARNQLEATLDTIPDLLFEVDKEGCILNFHTADIEKLYLKPEQFVGKRV 396 Query: 475 WYECVLPEDRQHAE-KVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERL 533 VLP+ + + ++L++ LE+ + + +N++ EV Sbjct: 397 --NEVLPDSVGDVIFQAMAEALETGRSQGLEYSLAQNGKQSCYELSVSTKINQKNEVVSF 454 Query: 534 LGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQE 593 L + D+T Q ++ L ++ ERL + L + D+ + + + M G+ Sbjct: 455 LFLARDVTARVQQSKELVEKDERLELILSASKIGQWDWDIESNVMLWDERSCTMLGYPP- 513 Query: 594 EALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPL-S 652 EA + + D+ +M+ + + A + + V + S Sbjct: 514 EAFKMDYDKWASLLHPDDAYVMKRLKAHLEKGEAYSVEYRIRSGDDDWVWVESQGQTIES 573 Query: 653 TLDGSNIGSVLVIQDVTESRKMLRQL 678 G I V + D+T+ ++ L Sbjct: 574 DAKGRPIRMVGIYMDITDRKRSEDLL 599 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 67/450 (14%), Positives = 148/450 (32%), Gaps = 84/450 (18%) Query: 304 FRNAMEYSAIGMALVGT-EGQWLQTNKALCQFLGYSQEELRGLTFQQL--TWPEDLNKDL 360 F E M ++ G+ ++ N+A F GYS++EL+ ++ Q L P+ ++K+L Sbjct: 31 FGEFFERQGAVMLIMDPVTGKIVRANRAAENFYGYSRDELKKMSIQDLNTLTPKQVSKEL 90 Query: 361 QQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY-------------- 406 L E Y + + G + + + L Sbjct: 91 A----LAREEKRNYFIFH-HRLAGGQTRQVAVHSIPYSFDNQSFLVSTIHELSSGSHQQQ 145 Query: 407 ----------------------------FIAQIEDINELKRTEQVNQQLMERITLANE-- 436 I + + + + R L E Sbjct: 146 DLQHYQQNLEELLQLQETELKESQERQSLILVLAVFTQAILILFLFYDISRRKQLQAELK 205 Query: 437 ------------AGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDR 484 + + + + + I ++ +L + + E Sbjct: 206 QVATTLTNIMDSSTEVAVIATDTEGVITEFNSGAEKLLGYSAQELVGKETPLKF-HSEKE 264 Query: 485 QHAE---------------KVIRDSLQSRSPFKLEFRITVKDGIRH-IRALANRVLNKEG 528 A +V + L+ SP E+ KDG+ + + +L++ Sbjct: 265 IQARAQRLSEALKRPVKGFQVFTEKLKEDSPQDHEWTYARKDGVLVPVSLIVTPILDENH 324 Query: 529 EVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMS 588 + LG+ D+TE+++ +AL + + +L TLD+I + + +D I + + Sbjct: 325 QKVGYLGVAQDVTELRRSQQALIEARNQLEATLDTIPDLLFEVDKEGCILNFHTADIEKL 384 Query: 589 GWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSI 648 E+ +G + VL + GD + + + A + + + L ++G S+ Sbjct: 385 YLKPEQFVGKRVNEVLPDSVGD--VIFQAMAEALETGRSQGLEYSL-AQNGKQSCYELSV 441 Query: 649 TPLSTLDGSNIGSVLVIQDVTESRKMLRQL 678 + + + + +DVT + ++L Sbjct: 442 STKINQKNEVVSFLFLARDVTARVQQSKEL 471 Score = 88.4 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 50/241 (20%), Positives = 89/241 (36%), Gaps = 27/241 (11%) Query: 529 EVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGE-AVVCIDMAMKITFMNPVAEKM 587 + +L + D++ KQL L Q L +DS E AV+ D IT N AEK+ Sbjct: 183 QAILILFLFYDISRRKQLQAELKQVATTLTNIMDSSTEVAVIATDTEGVITEFNSGAEKL 242 Query: 588 SGWTQEEALGVPLLTVLHITFGDNGPL-------------MENIYSADTSRSAIEQDVVL 634 G++ +E +G H + S + + Sbjct: 243 LGYSAQELVGKETPLKFHSEKEIQARAQRLSEALKRPVKGFQVFTEKLKEDSPQDHEWTY 302 Query: 635 HCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQL-----SYSASHDALTH 689 + G V +TP+ + +G + V QDVTE R+ + L A+ D + Sbjct: 303 ARKDGVLVPVSLIVTPILDENHQKVGYLGVAQDVTELRRSQQALIEARNQLEATLDTIPD 362 Query: 690 LANRASFEKQLRILLQTVNSTHQRHALVFIDLDRF--KAVNDSAGHAAGDALLRELASLM 747 L FE + ++ +++ ++F K VN+ + GD + + +A + Sbjct: 363 L----LFEVDKEGCILNFHTADIEK--LYLKPEQFVGKRVNEVLPDSVGDVIFQAMAEAL 416 Query: 748 L 748 Sbjct: 417 E 417 >UniRef50_C7R9A3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R9A3_KANKD Length = 1515 Score = 666 bits (1719), Expect = 0.0, Method: Composition-based stats. Identities = 155/710 (21%), Positives = 293/710 (41%), Gaps = 31/710 (4%) Query: 413 DINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIP-PHIKPN 471 + E + Q ER+ L+ G +W+W+++ Y+ P I+ Sbjct: 811 RMRERRMAALQLTQSEERLKLSLWGSGDELWDWQVQSGALHLSNEWP--YDFPRDGIRSG 868 Query: 472 WQVWYECVLPEDRQHAEKVIRDSLQSRS-PFKLEFRITVKDGIRHIRALANRV--LNKEG 528 + + + P D + + + L +S ++ +RI+ + G +V ++ Sbjct: 869 YSMANSNIHPNDLPYVRQSLNAHLADKSMHYESTYRISDEHGGWIWVLDRGKVVSRDENQ 928 Query: 529 EVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMS 588 + R+ G ++TE+K + L + + D+I + V +D +N K++ Sbjct: 929 KPLRMAGTLKNITELKNTEQQLS----MIVKSFDNISDGVWILDENFHYIAVNKAFTKIT 984 Query: 589 GWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSI 648 G+ + E LG L+ V + + + + + T + ++V + G +Y + +I Sbjct: 985 GFDESEVLGK-LMKVSSLHQITDDEFYD-LRNELTEKGFWYGELVAKRKDGDTYPIEINI 1042 Query: 649 TPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVN 708 + DG I V V D+T ++ R+L A+ D LT L NR SF L++ Sbjct: 1043 DVVRDNDGEIINYVGVFSDITFRKQAERELRRLATVDQLTDLKNRTSFRTLFEHLIEDSG 1102 Query: 709 STHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLR-SSDVLARLGGDEFGL 767 +HAL+FIDLD FK +NDS GH GD LL +A ++ ++ + V+ARLGGDEF + Sbjct: 1103 R-GDQHALLFIDLDNFKRINDSLGHGIGDELLIYVAKILQEIVSDQNGVVARLGGDEFTV 1161 Query: 768 LLPDCNV-ESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQAD 826 LL + + IA I+ V S GI + +N A E++ AD Sbjct: 1162 LLQEVDTWNKPAKIAQAILDEFAK-SLPLSTAEVVVSPSIGIVMYPENGTSAEELLKNAD 1220 Query: 827 IACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEA 886 A Y +K G+ Y Q R + + + + I++++ +M S + Sbjct: 1221 TAMYYAKKKGKNTYQFYTRQMNEQAKLRITLESELR-QAIEKDEFVMFYQPKVSLQ--TG 1277 Query: 887 RNLWLISLKLWS-CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGI-- 943 + + +L W ++ F + + +RV + Q + ++GI Sbjct: 1278 KITGMEALVRWRNPRRGLVLPGEFIPLAEEAGFIIPISQRVIEKTCLQI-RDWQNRGIFH 1336 Query: 944 -SISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRL 998 +++ LS L + L + + P L I +++ + ++ LR Sbjct: 1337 GKVAVNLSAVQFYHENLWETVKNALHLAKIEPDALEFEITEGMVMEDLAQSLQQMRTLRE 1396 Query: 999 AGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGM 1058 G + L G +LK D L +D +++ + D L+ I A L + Sbjct: 1397 MGISLALDDFGVGYSSLGNLKDFPIDTLKIDRTFVWDLEDSDRDRNLVASIVTLAHNLDI 1456 Query: 1059 KTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQP---LDLLVNSSYFAIN 1105 K +A V +D L +G + I G + + P ++ ++N F ++ Sbjct: 1457 KVVAEGVENRNQVDALREMGCEEIQGFIFSRPVPPWDIETMLNIEDFDLD 1506 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 53/298 (17%), Positives = 110/298 (36%), Gaps = 25/298 (8%) Query: 266 SHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTE-GQW 324 + ++ L+IL + ++ M R +++SE + ++ S + + G Sbjct: 791 TLYGFILGLIILAFSYLIWARMRERRMAALQLTQSEERLKLSLWGSGDELWDWQVQSGAL 850 Query: 325 LQTNKALCQF------LGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEK 378 +N+ F GYS P DL Q + ++ + Y Sbjct: 851 HLSNEWPYDFPRDGIRSGYSMA-------NSNIHPNDLPYVRQSLNAHLADKSMHYESTY 903 Query: 379 RYYNRNGDVVWALLAVSLV-RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEA 437 R + +G +W L +V R + PL +++I ELK TEQ +++ ++ Sbjct: 904 RISDEHGGWIWVLDRGKVVSRDENQKPLRMAGTLKNITELKNTEQQLSMIVKSFDNISD- 962 Query: 438 GGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVL--PEDRQHAEKVIRDSL 495 G+W + + + +K ++ + + +D + +R+ L Sbjct: 963 ---GVWILDENFHYIAVNKAFTKITGFDESEVLGKLMKVSSLHQITDDEFY---DLRNEL 1016 Query: 496 QSRSPFKLEFRITVKD-GIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQ 552 + + E KD I + V + +GE+ +G+ D+T KQ L + Sbjct: 1017 TEKGFWYGELVAKRKDGDTYPIEINIDVVRDNDGEIINYVGVFSDITFRKQAERELRR 1074 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 55/142 (38%), Gaps = 14/142 (9%) Query: 296 HISESETHFRNA---MEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGL-----TF 347 + +E + + G+ ++ ++ NKA + G+ + E+ G + Sbjct: 942 ELKNTEQQLSMIVKSFDNISDGVWILDENFHYIAVNKAFTKITGFDESEVLGKLMKVSSL 1001 Query: 348 QQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYF 407 Q+T E + + EK + E ++GD + + +VR DG + + Sbjct: 1002 HQITDDEFYDLRNELTEK------GFWYGELVAKRKDGDTYPIEINIDVVRDNDGEIINY 1055 Query: 408 IAQIEDINELKRTEQVNQQLME 429 + DI K+ E+ ++L Sbjct: 1056 VGVFSDITFRKQAERELRRLAT 1077 >UniRef50_A8FY98 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FY98_SHESH Length = 951 Score = 666 bits (1718), Expect = 0.0, Method: Composition-based stats. Identities = 164/855 (19%), Positives = 323/855 (37%), Gaps = 23/855 (2%) Query: 250 MAADPSLLATPRTYLMSHMPWLPFLLI--LLPANI--MTMVMYAFRAERKHISESETHFR 305 + + P+LL P+ + + LLI +P +I + A A + +E F Sbjct: 82 LLSQPALLIIPKLINIFAGVLVILLLIKRWVPRDIHERKEALLALHAAKSASVNNENLFN 141 Query: 306 NAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEK 365 + + + N+ +GY +EL G T + ++ + ++ Sbjct: 142 SIFNGVTDACIFADSNRNIVSINQGFELMMGYGIDELEGKTASIIYESDEEYERQGRIHF 201 Query: 366 LISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQ 425 ++ + E Y +++G ++ + ++R D L ++ I D+ + K+ Q Sbjct: 202 NLAAKEKVTPYEANYRHKDGSIIVGETSRIVIRTLDDQILGYVGFIRDVTDRKKATTALQ 261 Query: 426 QLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQ 485 + ++ + +G W+ N W+K +++ P + V E R Sbjct: 262 ESTAMLSHHVQNTPLGCISWDSNLNCIEWNKSAEKIFGYSPDEVIGHALLEILVSEEIRD 321 Query: 486 HAEKVIRDSLQS-RSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVK 544 + + + + IT + ++ GEV + + +D+TE K Sbjct: 322 DINNIGKILFKGNKCTRSSNENITKDGRTIICEWYSTPIVGVNGEVIGVTSLILDITESK 381 Query: 545 QLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVL 604 Q L + + + D + I +N ++G+ ++E +G + Sbjct: 382 QAELKL----KHAASVFTHTNQGITITDTSGVIIEVNDAFSAITGYARDEVIGQNPRVLQ 437 Query: 605 HITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLV 664 + + +++ + ++ ++ Y +I+ + G V + Sbjct: 438 --SGRHSPEFYREMWATLQADGHWTGEIWNKRKNDEIYPEMLTISAVLDATGKVQNYVAL 495 Query: 665 IQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRF 724 D+T ++ QL A +D LT+L NR +L + V A+VF+DLD+F Sbjct: 496 FNDITAIKEHQEQLERIAHYDTLTNLPNRTLLADRLTQSMVQVRRRKSSLAVVFLDLDKF 555 Query: 725 KAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNV-ESARFIATR 783 K VND+ GH GD LL ++ + LR D LAR+GGDEF +L D E + R Sbjct: 556 KDVNDAYGHDVGDKLLIVISRRLKEALRDIDTLARIGGDEFVAVLMDIEKGEDCEPVLER 615 Query: 784 IISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVY 843 ++ A + EG + +V AS G+ + + A +++ AD A Y +K+ G+ ++ Sbjct: 616 LLEAASG-SVTVEGIMLKVSASMGVAIYPQDGIDADQLLRHADQAMYVAKHEGKNCYHLF 674 Query: 844 EPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGE 902 + Q A R L + + +++ ++ + R + +L W S E Sbjct: 675 DTAQNIAMQIRHD-DLQSMRKALDQSEFVLYYQPKVNMR--TGAIIGAEALIRWLSPERG 731 Query: 903 IIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVA-SKGISISLPLSVAGLSSATLVN 961 ++ F + + +S + V Q A I +S+ +S L V Sbjct: 732 LVGPNEFLPAIENHVISIEVGEWVIDTALGQIAAWQELGLDIPVSVNVSALQLQHDGFVT 791 Query: 962 DLLEQLENSP-LPPRLLHLIIPAEAILDH----AESVQKLRLAGCRIVLSQVGRDLQIFN 1016 L LE P + P L + + +++D + ++ G L G Sbjct: 792 CLAALLEAHPEVAPSSLEIEVLETSLIDDVMQVSATMLACIELGVTFALDDFGTGYSSLT 851 Query: 1017 SLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSG 1076 L+ A + +D ++ D ++ + A+ K IA V TL Sbjct: 852 YLRRLPASLIKIDQTFVLDMLTTPDDLAIVEGVVSLAKSFKHKVIAEGVETIAHGTTLLQ 911 Query: 1077 IGVDLIYGEVIADAQ 1091 G +L G IA Sbjct: 912 TGCELAQGYGIARPM 926 >UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WUG6_METML Length = 836 Score = 665 bits (1717), Expect = 0.0, Method: Composition-based stats. Identities = 135/706 (19%), Positives = 287/706 (40%), Gaps = 32/706 (4%) Query: 413 DINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELY--EIPPHIKP 470 + + R++ A + ++ ++ ++ + + + ++ Sbjct: 144 RVQQRTAELTSALNQSHRLSEALDHIPAFVYIKDINGKYVYANRMTLDFFKCSVDDLVQI 203 Query: 471 NWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGE- 529 + ++ E + +K + + + + ++ D R + + E + Sbjct: 204 DEGKYFSARTLEKSRSVDKSVIE--RGEDACEEIEAVSDDDKKRTFLQIKTPIYENEADR 261 Query: 530 -VERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMS 588 + L GI+ D+T +K +L + ++ D I +N ++ Sbjct: 262 KIWGLCGISTDITALKNAETSLRIAATAFE-----SSDGILITDAGCSILQVNSAFTTIT 316 Query: 589 GWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSI 648 G++ E+ +G + + + + ++ + ++ ++G Y +I Sbjct: 317 GYSAEDVVGKNPRIL--SSGRHDQLFYQALWDRVNTTGTWCGEIWNRRKNGDIYPERITI 374 Query: 649 TPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVN 708 + + DG V V D++ES+ Q+ + A +D LT+L NR ++R + + Sbjct: 375 SEVKDKDGKVTNYVSVFTDISESKASSEQIEHLAFYDPLTNLPNRLLLLDRVRQAFSSSS 434 Query: 709 STHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLL 768 T ++ AL+F+DLD FK +ND+ GH+ GD LL+ A + +R+ D +AR GGDEF ++ Sbjct: 435 RTGKKGALLFVDLDHFKVLNDTLGHSTGDLLLKLQAERLSHCVRAGDTVARFGGDEFVVV 494 Query: 769 LPDCNVES------ARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVM 822 L D + + A I +I+S +++ + ++ +S GITL + H+ +++ Sbjct: 495 LEDLDRNATEAAAIAEQIGNKILSTLHE-PCQFGTHQYQSTSSIGITLFSGDEHEIEDLL 553 Query: 823 SQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPR 882 QADI+ Y +K GR + ++P S RA++ + ++ I++ QL + Sbjct: 554 KQADISMYQAKKAGRNTLRFFDPAMQEKLSVRASLESELRY-AIEKQQLALYYQVQVD-- 610 Query: 883 IPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS- 940 R + +L W E + F + AL + V + Q A+ S Sbjct: 611 -DNQRMVGAEALIRWIHPERGTVSPIEFIPIAEESALILDVGHWVINTACMQLAEWAKSV 669 Query: 941 --KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQ 994 K + I++ +S + V + ++ + L L + IL+ + + Sbjct: 670 EKKHLMIAVNVSAHQFRALDFVQSTQQAIDLHKIDASRLKLELTESVILEDVDDVIAKMH 729 Query: 995 KLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQ 1054 L+ G ++ L G + LK D + +D ++ + D +++ I A Sbjct: 730 ALKALGVKLSLDDFGTGYSSLSYLKKLPLDQVKIDQSFVRDLAYDPNDAIMVKTIIDLAN 789 Query: 1055 RLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNSS 1100 + IA V L +D L G G L G + P++ L ++ Sbjct: 790 NFRINVIAEGVETELELDILKGYGCRLYQGYLFGRPVPIEQLQFAA 835 Score = 78.8 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 64/176 (36%), Gaps = 7/176 (3%) Query: 285 MVMYAFRAERKHISESETHFR---NAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEE 341 + + + +ET R A E S G+ + LQ N A GYS E+ Sbjct: 264 WGLCGISTDITALKNAETSLRIAATAFESS-DGILITDAGCSILQVNSAFTTITGYSAED 322 Query: 342 LRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTD 401 + G + L+ Q + + T+ E +NGD+ + +S V+ D Sbjct: 323 VVGKNPRILSSGRHDQLFYQALWDRV-NTTGTWCGEIWNRRKNGDIYPERITISEVKDKD 381 Query: 402 GTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKR 457 G +++ DI+E K + + + L L N + + FS R Sbjct: 382 GKVTNYVSVFTDISESKASSEQIEHLAFYDPLTNL--PNRLLLLDRVRQAFSSSSR 435 Score = 59.5 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 54/423 (12%), Positives = 120/423 (28%), Gaps = 49/423 (11%) Query: 160 VLSESIGALALVPLGLLFKPHYLLRHRNPRLLFESLLTLAITLTLSWLSMLY-------- 211 ++ G +L+P H NP L +++ + LS+ S+ + Sbjct: 3 WFGQTFGEQSLLP-------HGFCLTWNPS-LLWTMVVSDAVIALSYFSIPFGLWYFAKK 54 Query: 212 ---LPWPFTFIIVLLMWSAVRLPR----------------MEAFLIFLTTVMMVSLMMAA 252 +P+ + ++ + A + + + + Sbjct: 55 RPDIPYRWLMVVFGVFIVACGVTHIFDIVNIWYPSYWASAYAKAFTGVVSFATAVAVWWI 114 Query: 253 DPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSA 312 P L P + + + + + AE A+++ Sbjct: 115 MPLALKAPSAQSLQVLNQ----ALARSHAELETRVQQRTAELTSALNQSHRLSEALDHIP 170 Query: 313 IGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEIN 372 + + G+++ N+ F S ++L + + L K + +I + Sbjct: 171 AFVYIKDINGKYVYANRMTLDFFKCSVDDLVQIDEGKYFSARTLEKSRSVDKSVIERGED 230 Query: 373 TYSMEKRYYNRNGDVVWALLAVSLVR--HTDGTPLYFIAQIEDINELKRTEQVNQQLMER 430 E + + L + + D DI LK N + R Sbjct: 231 ACE-EIEAVSDDDKKRTFLQIKTPIYENEADRKIWGLCGISTDITALK-----NAETSLR 284 Query: 431 ITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKV 490 I GI + +I + + D Q + Sbjct: 285 IAATAFESSDGILITDAGCSILQVNSAFTTITGYSAEDVVGKNPRILSSGRHD-QLFYQA 343 Query: 491 IRDSLQSRSPFKLEFRITVK-DGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEA 549 + D + + + E K I R + V +K+G+V + + D++E K +E Sbjct: 344 LWDRVNTTGTWCGEIWNRRKNGDIYPERITISEVKDKDGKVTNYVSVFTDISESKASSEQ 403 Query: 550 LFQ 552 + Sbjct: 404 IEH 406 >UniRef50_Q1ASD1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ASD1_RUBXD Length = 1101 Score = 665 bits (1717), Expect = 0.0, Method: Composition-based stats. Identities = 194/820 (23%), Positives = 341/820 (41%), Gaps = 29/820 (3%) Query: 283 MTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEE- 341 + + A + + ESE+ R + ++ EG++L+ + A L Y+ E Sbjct: 270 VATDVTGRVAAERRLRESESELRAVFAAMTDAVLVLDREGRYLRVSSADPSLL-YAPAEG 328 Query: 342 LRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTD 401 G T ++ E + + + + G T +E G W VS + Sbjct: 329 RVGKTVHEVLPREQARLFMDAIRRALEG-GRTIGVEYELPT-GGRSRWFSARVSPM--PG 384 Query: 402 GTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFEL 461 G ++ DI E + E+ ++ ER + +A G+ E + I ++ E+ Sbjct: 385 GRVVW---VARDITERREAERRLRESEERFRVLADAALEGLVISE-RGRILEVNRAYTEI 440 Query: 462 YEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALAN 521 P V V+PE R+ A + I P+++E KDG R + Sbjct: 441 LGYEPEEVVGAPV-LGRVVPEHREIARRRIAAGYD--RPYEVE--AVRKDGRRVHLEIRG 495 Query: 522 RVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVC--IDMAMKITF 579 R G R+ + D+TE K+ L + +E+ ++ + V +D + Sbjct: 496 RQATYRGRRVRITAM-RDVTERKRAERELREAQEQYRRLVEQLPAVVYIDRLDETSSNVY 554 Query: 580 MNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSG 639 +P EK+ G++ +E P + + D ++ A+ +E + L R G Sbjct: 555 SSPQTEKIFGYSPQEWASDPEMFPRVLHPADRESVLAAHARANARGEPLELEYRLIARDG 614 Query: 640 GSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQ 699 V S L +G+ ++ D+TE + + +L + A HD LT L NRA F + Sbjct: 615 RVVWVRDSSIVLRDAEGNPRWRQGLMVDITEQKNLEARLVHLAFHDPLTGLPNRALFMDR 674 Query: 700 LRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLAR 759 L L + A++FIDLD FK VNDS GH AGD LL +A + R D +AR Sbjct: 675 LEHALARAGRSGDVLAVLFIDLDNFKFVNDSLGHEAGDRLLALVARRLSGATRPGDTVAR 734 Query: 760 LGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQA 818 LGGDEF +LL + A +A R+ + + F GR V AS GI++ + Sbjct: 735 LGGDEFTVLLEGIADGGEAARVAGRVAEVLRE-PFRVAGRELFVSASVGISVSTAGSGSV 793 Query: 819 AEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGV 878 E+M AD+A Y +K G+ R V++ + +R + D + R + ++L + V Sbjct: 794 EELMRGADLAMYEAKREGKDRYRVFDFGMSRTAHDRLRLENDLR-RAVGRDELRLYYQPV 852 Query: 879 ASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA 937 R+ + R + +L W I+ F + + + RRV +AA Sbjct: 853 V--RLGDGRVVAFEALLRWEHPRRGILLPDRFVPLAEETGMIVGIGRRVLELACSRAAGW 910 Query: 938 VASKG-ISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH----AES 992 + +++S+ +S L V ++ L+ + L P L L + A +D A + Sbjct: 911 RRQEPSLAVSVNISARQLVRPDFVEEVGRILQRTGLEPEGLVLEVTESAAMDEPGEAARA 970 Query: 993 VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGH 1052 +Q+LR G R+ L G + L+ +L +D + G+ +L+ + Sbjct: 971 LQRLRERGVRLALDDFGTGYSSLSYLRRLPVCFLKIDRSFVEGLGGDSGSGVLVGGVIAL 1030 Query: 1053 AQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQP 1092 ++ LG + +A + P ++ L +G +L G A P Sbjct: 1031 SRELGFEPVAEGIETPGQLERLLELGCELGQGYYFASPMP 1070 Score = 123 bits (309), Expect = 5e-26, Method: Composition-based stats. Identities = 65/380 (17%), Positives = 133/380 (35%), Gaps = 25/380 (6%) Query: 300 SETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKD 359 SE R + S + M + G + + +G EE+ G + ++ + + Sbjct: 170 SEARLRAVVAGSPVTMFALDPSGVFTLAEGRGLERMGLLPEEVVGRSAFEVIGGD--PRL 227 Query: 360 LQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKR 419 + + ++GE E G+VV L +S + +G I D+ Sbjct: 228 AADLRRALAGECLASVAEF------GEVV-LELHLSPL-LREGRVEGVIGVATDVTGRVA 279 Query: 420 TEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECV 479 E+ ++ + A + + + L P + +E + Sbjct: 280 AERRLRESESELRAVFAAMTDAVLVLDREGRYLRVSSADPSLL-YAPAEGRVGKTVHEVL 338 Query: 480 LPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMD 539 E + IR +L+ +E+ + R A + + R++ + D Sbjct: 339 PREQARLFMDAIRRALEGGRTIGVEYELPTGGRSRWFSARVSPMP-----GGRVVWVARD 393 Query: 540 MTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVP 599 +TE ++ L + +ER + D+ E +V +I +N ++ G+ EE +G P Sbjct: 394 ITERREAERRLRESEERFRVLADAALEGLVI-SERGRILEVNRAYTEILGYEPEEVVGAP 452 Query: 600 LLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNI 659 VL ++ + +A R +V + G VH I Sbjct: 453 ---VLGRVVPEHREIARRRIAAGYDRPY---EVEAVRKDGRR--VHLEIRGRQATYRGRR 504 Query: 660 GSVLVIQDVTESRKMLRQLS 679 + ++DVTE ++ R+L Sbjct: 505 VRITAMRDVTERKRAERELR 524 >UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY13_9BACT Length = 857 Score = 665 bits (1717), Expect = 0.0, Method: Composition-based stats. Identities = 147/732 (20%), Positives = 285/732 (38%), Gaps = 60/732 (8%) Query: 410 QIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIK 469 + E K+ E Q +R E I+ + F++ +++ P Sbjct: 119 TMRYSMERKQIELELQDGKQRYKRLVEILPDIIYRID-ANGYFTFINEAVQVFGYEPDEL 177 Query: 470 PNWQVWYECVLPEDRQHAE-------------------KVIRDSLQSR------------ 498 + E + P+D + K+ + + Sbjct: 178 IGKH-FSELIHPDDLKKVSRSEVLSEYSGKTSDYKTTPKLFDERRTGQRKTTGLQIRVKS 236 Query: 499 --SPFKLEFRI---TVKDGIRHIRALA------NRVLNKEGEVERLLGINMDMTEVKQLN 547 SP +E+ I I +A + ++ + +G+ D+T K Sbjct: 237 KKSPEYMEYTIQIIKWPKKHEKIIEVAATGHYDSDIMKNDKRFVGTVGVIRDITGSKHAE 296 Query: 548 EALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHIT 607 E + L + ++ + D +I ++NP K++G+ EE LG L+ ++ Sbjct: 297 EMIC----TLSLAVEQSPAMIAVTDTDGRIDYINPKFCKVTGFEPEEVLGKNLIDIIQPG 352 Query: 608 FGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQD 667 + ++ A TS+ ++ + G + S++ + + +G + +++D Sbjct: 353 GESLSMADKTLWKAITSKGEWKEAFSSRKKHGELFWTSLSLSAIKSNEGFISHYLAIMED 412 Query: 668 VTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAV 727 +TE ++ ++ Y A +D+LT L NR F +L + + + Q A+ FID+DRFK V Sbjct: 413 ITEHKQAEERIHYLAYYDSLTALPNRELFHDRLNMAIIHAHRKQQMLAVAFIDIDRFKKV 472 Query: 728 NDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN-VESARFIATRIIS 786 ND+ GH+ GD LL+ +A + S +R D ++R GGDEF LLL + + +E A + RI+ Sbjct: 473 NDTLGHSTGDRLLKIIADRLKSCIREEDTVSRQGGDEFVLLLTEISRMEDANDVTQRILK 532 Query: 787 AVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQ 846 + + I + + AS GI L + A ++ AD A Y SK GR Y Sbjct: 533 KLKE-PVIIDDHDLCISASIGIALYPGDGTTAEALLKNADSAMYISKESGRDNYHFYSST 591 Query: 847 QAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIID 905 E+ + R ++ +L++ I R + + +L W + +I Sbjct: 592 VQEKAYEQLLEEM-YLRRALENRELVLYYQP--QVNIATGRLVGMEALLRWKHPKKGLIS 648 Query: 906 EQTFRRSFSDPALSHALDRRVFHEFFQQ--AAKAVASKGISISLPLSVAGLSSATLVNDL 963 F D +D V H +Q A + + I++ +S L++ + Sbjct: 649 PAEFIPLAEDTGQIVPIDFWVLHTACKQNMAWQRAGLPSVPIAVNISGHTFGRENLIDFV 708 Query: 964 LEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLK 1019 L ++ + P L L I + + ++ + KL+ G +I + G + L Sbjct: 709 NNVLHDTRMSPDALDLEITEGIAIQNLQTTIYKLNKLKSLGIQITIDDFGTGFSSLSYLS 768 Query: 1020 ANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGV 1079 L + N+ + + ++ + A+ L + IA V + L G+ Sbjct: 769 KFPIQKLKIGMTFIHNLHKDPTNSAIVKAVIAMAKSLQLTVIAEGVETDEQFEFLQGLQC 828 Query: 1080 DLIYGEVIADAQ 1091 D G + + A Sbjct: 829 DEFQGYLCSKAV 840 Score = 91.9 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 71/412 (17%), Positives = 135/412 (32%), Gaps = 74/412 (17%) Query: 285 MVMYAFRAERKH----ISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQE 340 + ERK + + + ++ +E + + G + N+A+ Q GY + Sbjct: 117 ARTMRYSMERKQIELELQDGKQRYKRLVEILPDIIYRIDANGYFTFINEAV-QVFGYEPD 175 Query: 341 ELRGLTFQQLTWPEDLNKD-LQQVEKLISGEINTYSMEKRYY--NRNGDVVWALLAVSL- 396 EL G F +L P+DL K +V SG+ + Y + + R G L + + Sbjct: 176 ELIGKHFSELIHPDDLKKVSRSEVLSEYSGKTSDYKTTPKLFDERRTGQRKTTGLQIRVK 235 Query: 397 ------------------------------------VRHTDGTPLYFIAQIEDINELKRT 420 + D + + I DI K Sbjct: 236 SKKSPEYMEYTIQIIKWPKKHEKIIEVAATGHYDSDIMKNDKRFVGTVGVIRDITGSKHA 295 Query: 421 EQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVL 480 E++ ++LA E I + I + + ++ P + + + Sbjct: 296 EEMICT----LSLAVEQSPAMIAVTDTDGRIDYINPKFCKVTGFEPEEVLGKNL-IDIIQ 350 Query: 481 P--EDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA-NRVLNKEGEVERLLGIN 537 P E A+K + ++ S+ +K F K G +L+ + + + EG + L I Sbjct: 351 PGGESLSMADKTLWKAITSKGEWKEAFSSRKKHGELFWTSLSLSAIKSNEGFISHYLAIM 410 Query: 538 MDMTEVKQLNEALFQ-----------EKERLHITLDSIGE---------AVVCIDMAMKI 577 D+TE KQ E + +E H L+ AV ID+ + Sbjct: 411 EDITEHKQAEERIHYLAYYDSLTALPNRELFHDRLNMAIIHAHRKQQMLAVAFIDID-RF 469 Query: 578 TFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIE 629 +N +G + + L + + + + T S +E Sbjct: 470 KKVNDTLGHSTGDRLLKIIADRLKSCIREEDTVSRQGGDEFVLLLTEISRME 521 >UniRef50_A6CIZ8 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Bacillus sp. SG-1 RepID=A6CIZ8_9BACI Length = 988 Score = 665 bits (1715), Expect = 0.0, Method: Composition-based stats. Identities = 177/836 (21%), Positives = 347/836 (41%), Gaps = 26/836 (3%) Query: 278 LPANIMTMVMYAFRAERKHISESETHF-RNAMEYSAIGMALVGTEGQWLQTNKALCQFLG 336 L A I + + +S F + + + ++ GQ + N A+ G Sbjct: 4 LTAIIQKQKKLLNEGKIDAMEKSLKDFYELSFKNYPEPIFILDNTGQIIVYNDAVLSLFG 63 Query: 337 YSQEELRGLTFQQLTWPEDLNKDL-QQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVS 395 ++ G P+ N D + +++G +++ ++ N+ G+ + + ++ Sbjct: 64 -NEAIKYGNNLLNKLNPKQQNVDWSEYFYPILNGREQSFT--TQFINKEGNTFESHVKLT 120 Query: 396 LVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWD 455 + G + I DI+ L ++ + L R+ A + IG WE+++ + S Sbjct: 121 PTKFGKGDFI-ISGVITDISALAIQKEHAESLEIRLNTAQQLADIGTWEYDIANDECSLS 179 Query: 456 KRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IR 514 + +E+ +P I P +Q+ E PED+ +L + F + RI DG R Sbjct: 180 YKSYEMLGMPYGITPTFQMLLETAHPEDKDIFLNEFVSALNEKRNFHCQNRIIRSDGAER 239 Query: 515 HIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMA 574 + +L+ + + +G D+TE K + + L + + ++ +S+ + +D+ Sbjct: 240 ILAHFGEVILDDNQKPVKYIGTTYDITEQKIIEDKLAETERQVLKISNSLDVGIWSMDVK 299 Query: 575 -MKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVV 633 + F++ E + G++ E+ LL + + ++ L E A + +Q Sbjct: 300 KNQYIFVSKGFETICGYSAEDFK-QGLLQWEDLIYCEDLHLFEQRKEALHTGKVPKQQYR 358 Query: 634 LHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANR 693 + ++G + V + G + ++ D+TE ++ +++Y A HD LT L NR Sbjct: 359 IVHKNGNTKWVQDELITTFNTKGDLVRIEGILSDITEQKEAEEKVNYIAHHDYLTDLPNR 418 Query: 694 ASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRS 753 FE++L+ ++ +Q +++ID+D FK VND+ GHA GD LL E+++ +L + Sbjct: 419 RKFEQELQKFIEQSKMANQEFGVMYIDMDGFKRVNDTLGHAIGDKLLVEISTRLLDCVPQ 478 Query: 754 SDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLID 812 +D +AR+GGDEF +L+ ++E + IA +I++A+ + + G V AS G+ Sbjct: 479 NDFVARIGGDEFSVLIDKMHSLEQSTTIAKKIVAAL-EVPYKIHGYELFVTASVGVAAYP 537 Query: 813 DNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLM 872 + H A ++ +AD A Y +K G+ +Y + ++ D + R +K +L Sbjct: 538 QDGHDAQTILQKADKALYRAKEMGKNNYQIYNSSMNIEAYKLYSLENDLR-RAVKNKELY 596 Query: 873 MLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFF 931 + + + +L W E + F + L + F Sbjct: 597 FHYQPKVDAQTE--KLVGAEALIRWEHPEWGQVSPAEFIPLAEENDLIFKVTSWTFQTIC 654 Query: 932 QQAAKAVAS--KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH 989 Q + IS+ +S +L+ + NS + PRL+ L I +A++ + Sbjct: 655 TQIKNWTDRNLPLVPISINVSPKIFIKNEWQEELIYIINNSNVDPRLIELEITEQALIKN 714 Query: 990 AES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEML 1045 ES ++KL+ G +I L G LK D + +D ++ + Sbjct: 715 EESFSAGIEKLKQLGVKISLDDFGTGYSSLLYLKKFKLDTVKIDKSFVDDILKGKP--TI 772 Query: 1046 ITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADA-QP--LDLLVN 1098 I A M IA V L D I G + + P L+ L Sbjct: 773 TKAIINMAHEFDMTVIAEGVETRAQQSFLQKQDCDQIQGYLYSKPILPEDLEELFR 828 >UniRef50_B2JAQ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=Nostocaceae RepID=B2JAQ5_NOSP7 Length = 1043 Score = 663 bits (1711), Expect = 0.0, Method: Composition-based stats. Identities = 176/814 (21%), Positives = 312/814 (38%), Gaps = 27/814 (3%) Query: 297 ISESETHFRN---AMEYSAIGMALVGT---EGQWLQTNKALCQFLGYSQEELRGLTFQQL 350 + E E A+ S+ G+ L + + N A GY E+ G + L Sbjct: 220 LQEPEVDLHLMERAIAASSNGIILTDPNQPDNPIIYVNPAFELITGYCASEVIGRNCRFL 279 Query: 351 TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQ 410 + LQ++ I + + + R Y ++ + W L ++ V G FI Sbjct: 280 QGNDLEQVALQELRSAIQEQRECHVI-LRNYRKDNFLFWNELYLAPVFDNSGYLTNFIGI 338 Query: 411 IEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKP 470 DI + + + E+ + GIW + +++M + Sbjct: 339 QTDITHHLQALEALGKQEEQYRRIVQTATEGIWLLDKDNCTTFVNQQMATMLGYTIEEML 398 Query: 471 NWQVWYECVLPEDRQHAEKVIRDSLQS-RSPFKLEFRITVKDGIRHIRALANRVLNKEGE 529 ++ + E + A + Q + +FR + I + A +L+ +G Sbjct: 399 GATLF-SFMDSEGLEIANSCLSRRYQGIQEAHDFKFRCQDGSDLWAIISCA-PLLDDQGN 456 Query: 530 VERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMA-MKITFMNPVAEKMS 588 LG+ ++T+ K AL + K+RL L S+ + + I + ++NP A K+ Sbjct: 457 YAGALGMVTNITDRKLAEAALQESKQRLDGILCSLEDVIWSISADTFETLYLNPAALKVY 516 Query: 589 GWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSI 648 G++ E L I D + I + E + + G + Sbjct: 517 GYSVSEFFENSNLWFEVIHPEDQQQVHAAIQPLFLTEKQ-ELEYRIVRPDGQVRWLLNRS 575 Query: 649 TPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVN 708 + G I + D+TE + + +L ++A +DALT L NR F +L + + Sbjct: 576 HLIYNASGLPIRIDGIATDITERKLLEEKLVHNAFYDALTGLPNRILFIDRLEQAIAQMK 635 Query: 709 ST-HQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGL 767 A++F+DLDRFK VNDS GH GD LL LA + L+ D +ARLGGDEF + Sbjct: 636 HNPDDLFAVLFLDLDRFKVVNDSLGHLVGDQLLVTLAQRLQQCLQPDDTVARLGGDEFTI 695 Query: 768 LLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQAD 826 LL +E A IA I A+ F G + AS GI L + Q A+++ AD Sbjct: 696 LLSHIQTIEDATDIAKHIHQALK-PPFNLCGYEVFMTASIGIALGTNKYVQPADLLRDAD 754 Query: 827 IACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEA 886 A Y +K + V++ E + D +W ++ +L + + I Sbjct: 755 TALYRAKEQSQAGHIVFDTTMYDRAVELLQLETDLRW-AVERQELCIFYQPIIC--IKTG 811 Query: 887 RNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA----VASK 941 + +L W E +I F + L + + V E +Q + A K Sbjct: 812 KITGFEALVRWQHPERGLISPTEFIPVAEETGLIIPIGQWVLTESCKQLRQWQLQFPAIK 871 Query: 942 GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLR 997 +++++ LS S L+ + + L+++ L L L I AI+ + +++L+ Sbjct: 872 PLTLNVNLSGKQFSQPHLIEQISQILQDTGLSSSNLKLEITETAIIASPQKATSILKQLK 931 Query: 998 LAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLG 1057 G ++ + G L D L +D + + ++ I A LG Sbjct: 932 AFGLQLCIDDFGTGYSSLAYLHNFPIDVLKIDRSFVNRIDSDTEQFAIVRAIVTLADNLG 991 Query: 1058 MKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQ 1091 M +A V + L + G + + Sbjct: 992 MSVVAEGVETINQLAQLQLLQCQQAQGYLFSKPL 1025 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 62/338 (18%), Positives = 124/338 (36%), Gaps = 28/338 (8%) Query: 295 KHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPE 354 + + + E +R ++ + G+ L+ + N+ + LGY+ EE+ G T E Sbjct: 350 EALGKQEEQYRRIVQTATEGIWLLDKDNCTTFVNQQMATMLGYTIEEMLGATLFSFMDSE 409 Query: 355 DLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDI 414 L + + G + ++ ++G +WA+++ + + G + + +I Sbjct: 410 GLEIANSCLSRRYQGIQEAHDF--KFRCQDGSDLWAIISCAPLLDDQGNYAGALGMVTNI 467 Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKP-NIFSWDKRMFELYEIP-PHIKPNW 472 + K E Q+ +R+ + IW + ++Y N Sbjct: 468 TDRKLAEAALQESKQRLDGILCSLEDVIWSISADTFETLYLNPAALKVYGYSVSEFFENS 527 Query: 473 QVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD-GIRHIRALANRVLNKEGEVE 531 +W+E + PED+Q I+ + +LE+RI D +R + ++ + N G Sbjct: 528 NLWFEVIHPEDQQQVHAAIQPLFLTEKQ-ELEYRIVRPDGQVRWLLNRSHLIYNASGLPI 586 Query: 532 RLLGINMDMTEVKQLNEALFQEK------------------ERLHITLDSIGE---AVVC 570 R+ GI D+TE K L E L E+ + + AV+ Sbjct: 587 RIDGIATDITERKLLEEKLVHNAFYDALTGLPNRILFIDRLEQAIAQMKHNPDDLFAVLF 646 Query: 571 IDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITF 608 +D+ + +N + G L L L Sbjct: 647 LDLD-RFKVVNDSLGHLVGDQLLVTLAQRLQQCLQPDD 683 >UniRef50_C6P6X8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6X8_9PROT Length = 713 Score = 663 bits (1711), Expect = 0.0, Method: Composition-based stats. Identities = 154/704 (21%), Positives = 272/704 (38%), Gaps = 39/704 (5%) Query: 428 MERITLANEAGGIGIWEWELKPNIFSWDKR--MFELYEIPPHIKPNWQVWYECVLPEDRQ 485 ER+ LA EA G+ +WE L S EL I ++ + +D Sbjct: 8 QERLELALEAAGLDLWENNLITGEVSRSAAKTFMELGYSNEEITDCLDNYFTLIHSDDVP 67 Query: 486 HAEKVIRDSLQS-RSPFKLEFRITVKDGIRHIRALANRVLNKEG--EVERLLGINMDMTE 542 + I D L + ++ EFRI K+G A +++++ G +R +G+ ++ E Sbjct: 68 VVQSAINDHLSGSKEQYRCEFRIRAKNGSWVWFANYGKIMDRHGDDRGQRFVGVTFNIDE 127 Query: 543 VKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLT 602 K+ E L ++ +++ + V D + ++NP E+ LG Sbjct: 128 RKRKEEQLIVLEQDTRTLIENSPDTVARYDHECRRIYVNPALASSFPGGAEKILGKKPSE 187 Query: 603 VLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSV 662 + + I + + ++ + G H +T G + Sbjct: 188 I--PGGPEFDKFEAKIVEVFATGNNALFELKWQGKDGKELCNHIRLTAERDSSGRLTSVL 245 Query: 663 LVIQDVTESR--------------KMLRQLSYSASHDALTHLANRASFEKQLRILLQTVN 708 + +D+TE M L A+ D LT L NR +L+ L + + Sbjct: 246 AIGRDITELYESRAALKRANAQLENMNDLLQSQATSDPLTGLPNRRFMLDRLKHALASSS 305 Query: 709 STHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLL 768 + + AL+FIDLD FK +ND+ GH GD LL+++A + + +R D +ARLGGDEF ++ Sbjct: 306 RSGREGALLFIDLDNFKTLNDTLGHDVGDQLLQQVAHRLETCVREGDTVARLGGDEFVVM 365 Query: 769 LPDCNVESARFIA------TRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVM 822 L D + + A +I++A+N + +R S G TL +D+ E++ Sbjct: 366 LEDLSEKDLEAAAQTEAVGEKILAALNQ-PYQLGKHEYRNTPSIGATLFNDHQQSLDELL 424 Query: 823 SQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVAS-- 880 QADIA Y +K GR + ++PQ + RA + +E + ++ +Q + Sbjct: 425 KQADIAMYQAKRAGRNALRFFDPQMQETINSRATLE-NELRKALELHQFYLFYQVQVDSV 483 Query: 881 PRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVA 939 R +L W E ++ F + L + V Q Sbjct: 484 QEDGSHRATGAEALIRWAHPERGLVSPAQFIPLAEETGLIVPIGLWVLDTACAQLKTWQH 543 Query: 940 S---KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEA----ILDHAES 992 +G+ +++ +S V + ++ + P+LL L + I D + Sbjct: 544 DALTRGLVLAVNVSAKQFRQPDFVAQVDAAVQRHGIDPKLLKLELTESLLLENIQDTIAT 603 Query: 993 VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGH 1052 + LR G R L G LK D L +D ++ + D ++ I Sbjct: 604 MNALREIGIRFSLDDFGTGYSSLQYLKQLPLDQLKIDQSFICDLVSDSSDRAIVRTIIAM 663 Query: 1053 AQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 AQ L + IA V L G G + + P++ Sbjct: 664 AQSLNLNVIAEGVETEAQRQILLEKGCIHHQGYLFSKPVPINQF 707 Score = 90.7 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 53/287 (18%), Positives = 103/287 (35%), Gaps = 42/287 (14%) Query: 301 ETHFRNAMEYSAIGMA----LVGTEGQWLQTNKALCQ---FLGYSQEELRGL--TFQQLT 351 + A+E + + + + G + +++ + LGYS EE+ + L Sbjct: 8 QERLELALEAAGLDLWENNLITG------EVSRSAAKTFMELGYSNEEITDCLDNYFTLI 61 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLV-RHTDGTPLYFIAQ 410 +D+ + +SG Y E R +NG VW ++ RH D F+ Sbjct: 62 HSDDVPVVQSAINDHLSGSKEQYRCEFRIRAKNGSWVWFANYGKIMDRHGDDRGQRFVGV 121 Query: 411 IEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMF--------ELY 462 +I+E KR E+ L + E + ++ + + + ++ Sbjct: 122 TFNIDERKRKEEQLIVLEQDTRTLIENSPDTVARYDHECRRIYVNPALASSFPGGAEKIL 181 Query: 463 EIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIR---HIRAL 519 P P + E I + + + E + KDG HIR Sbjct: 182 GKKPSEIPGGPEF---------DKFEAKIVEVFATGNNALFELKWQGKDGKELCNHIRLT 232 Query: 520 ANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGE 566 A R + G + +L I D+TE+ + AL + + L+++ + Sbjct: 233 AER--DSSGRLTSVLAIGRDITELYESRAALKR----ANAQLENMND 273 Score = 58.0 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 23/147 (15%), Positives = 58/147 (39%), Gaps = 1/147 (0%) Query: 290 FRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQ 349 + + + + E R +E S +A E + + N AL E++ G + Sbjct: 128 RKRKEEQLIVLEQDTRTLIENSPDTVARYDHECRRIYVNPALASSFPGGAEKILGKKPSE 187 Query: 350 LTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIA 409 + + +K ++ ++ + N E ++ ++G + + ++ R + G +A Sbjct: 188 IPGGPEFDKFEAKIVEVFA-TGNNALFELKWQGKDGKELCNHIRLTAERDSSGRLTSVLA 246 Query: 410 QIEDINELKRTEQVNQQLMERITLANE 436 DI EL + ++ ++ N+ Sbjct: 247 IGRDITELYESRAALKRANAQLENMND 273 >UniRef50_B8GQW3 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GQW3_THISH Length = 926 Score = 663 bits (1710), Expect = 0.0, Method: Composition-based stats. Identities = 158/707 (22%), Positives = 295/707 (41%), Gaps = 37/707 (5%) Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSW-DKRMFELYEIPPHIKP 470 + + L++ + +ER+ +WE E + + + + I Sbjct: 222 QSQSTLRQQNLKLNRSVERMEALLRGAEAVLWEAEPATGQWRFVNGDTQAILGISAQQIG 281 Query: 471 NWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIR-HIRALANRVLNKEGE 529 + V +D + R + +P +++R + +R + + + +G Sbjct: 282 QPGIREARVHADDLPRLRETYRQA--GPTPSSVDYRYRSNEASWVWLRDIVSSASDSDGH 339 Query: 530 VERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSG 589 L G+ +D++ +Q AL + R ++ + E + D + T +NP E+++G Sbjct: 340 AV-LRGLTLDVSPQRQAALALKDSESRYREVIEHVSEVIFRTDHQGRWTLLNPAWEELTG 398 Query: 590 WTQEEALGVPLLTVLHITFGDNGPLMENIYSADT--SRSAIEQDVVLHCRSGGSYDVHYS 647 ++ E+LG P+ + ++ PL+E + + ++S + ++ L R+G V Sbjct: 399 YSIAESLGRPVSEFV---SAEDSPLLEALTNQLLHGNKSQLRDELRLLTRAGEPRWVSVF 455 Query: 648 ITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTV 707 + +G I + + D+TE ++ ++ A +D+LT L NR+ +LR+ + + Sbjct: 456 VRSSQDAEGRVIATFGTLTDITERKRAEEEIRRLAFYDSLTELPNRSLLYDRLRLAMASA 515 Query: 708 NSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGL 767 + A++F+DLD FK +ND+ GH GD LLR++AS M +R +D LARLGGDEF + Sbjct: 516 ARSRHHGAILFLDLDNFKDINDTLGHDVGDELLRQVASRMQGTIRETDTLARLGGDEFVI 575 Query: 768 LLPDCNVESARFIAT------RIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEV 821 +L D + E A+ +++ + + F S G TL D E+ Sbjct: 576 ILNDLHPEQAQAAVEAETLGSKLLHLLAE-PFRLGEHERHCTPSIGATLFGDGEVNVDEL 634 Query: 822 MSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASP 881 + QAD+A Y +K+ GR + +EP+ RAA+ D + + ++E+QL + Sbjct: 635 LKQADLAMYRAKDSGRNTLCFFEPEMHQVVKARAALEADFR-KALREDQLHLHYQPHVD- 692 Query: 882 RIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS 940 + L +L W E ++ F L L R V QQ A Sbjct: 693 --DQGHILGAEALLRWSHPERGMVPPMEFIAVAEQTGLIIKLGRWVLQTACQQLALWHRE 750 Query: 941 K---GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLII--------PAEAILDH 989 I++++ +S V ++ E L+++ P + L L + I Sbjct: 751 SQWMRINMAVNVSAKQFRHPDFVREVAEILQSTGAPAQHLVLELTESLLLEDTETVIT-- 808 Query: 990 AESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITII 1049 + LR G L G + LK L +D ++ + D + +I Sbjct: 809 --RMNALRELGVGFALDDFGTGYSSLSYLKRLPLSLLKIDQSFVRDILVDANDAAIAEMI 866 Query: 1050 QGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 A+ LG++ IA V P D L +G G + P+D L Sbjct: 867 ITLAKTLGLEVIAEGVETPEQRDFLLEMGCHQFQGYLFGRPGPVDQL 913 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 65/164 (39%) Query: 281 NIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQE 340 +T+ + R + +SE+ +R +E+ + + +G+W N A + GYS Sbjct: 343 RGLTLDVSPQRQAALALKDSESRYREVIEHVSEVIFRTDHQGRWTLLNPAWEELTGYSIA 402 Query: 341 ELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHT 400 E G + ED +L+ G + E R R G+ W + V + Sbjct: 403 ESLGRPVSEFVSAEDSPLLEALTNQLLHGNKSQLRDELRLLTRAGEPRWVSVFVRSSQDA 462 Query: 401 DGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWE 444 +G + + DI E KR E+ ++L +L +++ Sbjct: 463 EGRVIATFGTLTDITERKRAEEEIRRLAFYDSLTELPNRSLLYD 506 Score = 84.9 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 64/369 (17%), Positives = 116/369 (31%), Gaps = 20/369 (5%) Query: 199 AITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLA 258 +L L + Y P + L+ V L L L V+ ++ L A Sbjct: 125 LAGQSLGLLGVGYSPEGVNALSDALLERNVTLGIAMLALSILAAVLFGLVITRRLRRLDA 184 Query: 259 TPRTYLMSHMPW---------LPFLLILLPANI--MTMVMYAFRAERKHISESETHFRNA 307 R + + + L L A + R + ++ S Sbjct: 185 GARAFRAGRLDHRIPPLANDEMGDLARTLNALASDLGQSQSTLRQQNLKLNRSVERMEAL 244 Query: 308 MEYSAIGMALVGTE-GQWLQTNKALCQFLGYSQEELRGLTFQQ-LTWPEDLNKDLQQVEK 365 + + + GQW N LG S +++ ++ +DL + + + Sbjct: 245 LRGAEAVLWEAEPATGQWRFVNGDTQAILGISAQQIGQPGIREARVHADDLPRLRETYRQ 304 Query: 366 LISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQ 425 +G + S++ RY + VW VS +DG + D++ ++ + Sbjct: 305 --AGPTPS-SVDYRYRSNEASWVWLRDIVSSASDSDGHAV-LRGLTLDVSPQRQAALALK 360 Query: 426 QLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQ 485 R E I+ + + + EL V E V ED Sbjct: 361 DSESRYREVIEHVSEVIFRTDHQGRWTLLNPAWEELTGYSIAESLGRPV-SEFVSAEDSP 419 Query: 486 HAEKVIRDSLQS-RSPFKLEFR-ITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEV 543 E + L +S + E R +T R + + EG V G D+TE Sbjct: 420 LLEALTNQLLHGNKSQLRDELRLLTRAGEPRWVSVFVRSSQDAEGRVIATFGTLTDITER 479 Query: 544 KQLNEALFQ 552 K+ E + + Sbjct: 480 KRAEEEIRR 488 >UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=B3E661_GEOLS Length = 1027 Score = 662 bits (1709), Expect = 0.0, Method: Composition-based stats. Identities = 145/709 (20%), Positives = 277/709 (39%), Gaps = 32/709 (4%) Query: 410 QIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIK 469 Q E + + + EQ +++ + ++ + + W++ + ++ +P Sbjct: 318 QREQLAKARAVEQALLDARQQLNDIIDFFPDAVFVIDRNKRVTIWNRAIEKMSGVPKEEM 377 Query: 470 PNWQVWYECVLPEDRQHAEKV-------------IRDSLQSRSPFKLEFRI--TVKDGIR 514 + ++ + + + + E Sbjct: 378 LGKGDHEYSIPFYGQRRTQLLDLLDLDDAELAAKYSNIRRVGEVLDAETFCPALHDGKGA 437 Query: 515 HIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMA 574 ++ A + N GE + D+++ KQ L + L +++ AVV D Sbjct: 438 YVWATGVPLYNAAGERIGAIEAIRDISDRKQSELFLKK----LTHGIENSASAVVITDTQ 493 Query: 575 MKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVL 634 I ++N +++G++ EEA+G + + +++ S +++ Sbjct: 494 GVIEYVNKKFIQLTGFSLEEAVGKNPRILKSEATP--PEVFVDLWKTILSGREWRGELLN 551 Query: 635 HCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRA 694 ++G Y SI+PL G + ++D+ E + + + A D LT L NR Sbjct: 552 RRKNGEVYWSITSISPLRNDSGEITHFIANVEDINERKNAEATIEHLAYFDPLTDLPNRR 611 Query: 695 SFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSS 754 + +L + L+ AL+++DLD FK VNDS GH AGD LL+E+A ++R Sbjct: 612 MLQDRLELALRRSRRHGSNVALMYLDLDSFKHVNDSMGHPAGDLLLKEMAGRFSGVVRDD 671 Query: 755 DVLARLGGDEFGLLLPDCNVE-SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDD 813 DV+ RLGGDEF L+L D + + IA ++I AV +GR V AS GI L Sbjct: 672 DVVCRLGGDEFALILHDIHQDQDVVPIAQKLIEAVAQ-PVPLDGREVVVTASIGIALFPR 730 Query: 814 NNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMM 873 + + ADIA Y +K G+ Y + + S R A+ ++ + +L + Sbjct: 731 DGGDVKNLEKHADIALYHAKEEGKNTFRFYLEELNSTISTRIALEQGLRY-AKERQELEL 789 Query: 874 LAHGVASPRIPEARNLWLISLKLWS-CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQ 932 + + + +L W + ++ F L + V Sbjct: 790 HYQPKVC--VASGKVSGVEALLRWHSPDFGLVSPIRFIPLAEQTRLIIPIGEWVLRTACL 847 Query: 933 QAAKAVASK-GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE 991 Q + +++++ LS L S LV + ++ + + P L L + A++++ + Sbjct: 848 QQVQWREQGLLLNMAVNLSAIQLKSPGLVERVAAIIDETGIQPEHLELELTESALVNNPD 907 Query: 992 S----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLIT 1047 +++LR GC I + G + LK+ L +D ++ N D + Sbjct: 908 EVVQLLERLRTLGCSISIDDFGTGYSSLSYLKSFPVTILKIDRSFVRDLAHNSGDRAIAR 967 Query: 1048 IIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 + A L MKT+A V + L IG I G + + D + Sbjct: 968 SVVDLANNLDMKTVAEGVESEEQLTILQQIGCTYIQGFIYSRPVQADQV 1016 Score = 84.2 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 73/545 (13%), Positives = 173/545 (31%), Gaps = 77/545 (14%) Query: 222 LLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPAN 281 L+ S V+L + + V + A A + S + L ++ Sbjct: 257 LMALSTVQLAVLGMDRPLVIAVSRDLKQLHAGWHKHAVNQAITFSIIVALSISALIGFQG 316 Query: 282 IMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEE 341 + RA + + ++ + +++ + ++ + N+A+ + G +EE Sbjct: 317 YQREQLAKARAVEQALLDARQQLNDIIDFFPDAVFVIDRNKRVTIWNRAIEKMSGVPKEE 376 Query: 342 LRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYN--------------RNGDV 387 + G + + P + Q ++ L + + +G Sbjct: 377 MLGKGDHEYSIPFYGQRRTQLLDLLDLDDAELAAKYSNIRRVGEVLDAETFCPALHDGKG 436 Query: 388 VWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWEL 447 + + + G + I I DI++ K++E ++L I E + + Sbjct: 437 AYVWATGVPLYNAAGERIGAIEAIRDISDRKQSELFLKKLTHGI----ENSASAVVITDT 492 Query: 448 KPNIFSWDKRMFEL--YEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEF 505 + I +K+ +L + + + N ++ P + ++ S ++ E Sbjct: 493 QGVIEYVNKKFIQLTGFSLEEAVGKNPRILKSEATP---PEVFVDLWKTILSGREWRGEL 549 Query: 506 RITVKDGIRHI-RALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQ-----------E 553 K+G + + + N GE+ + D+ E K + Sbjct: 550 LNRRKNGEVYWSITSISPLRNDSGEITHFIANVEDINERKNAEATIEHLAYFDPLTDLPN 609 Query: 554 KERLHITLD---------SIGEAVVCIDMAMKITFMNPV-------------AEKMSGWT 591 + L L+ A++ +D+ +N A + SG Sbjct: 610 RRMLQDRLELALRRSRRHGSNVALMYLDLD-SFKHVNDSMGHPAGDLLLKEMAGRFSGVV 668 Query: 592 QEE-----ALGVPLLTVLHITFGDNG--PLMENIYSADTSRSAIEQDVVLHCRSGGSYDV 644 +++ G +LH D P+ + + A + G V Sbjct: 669 RDDDVVCRLGGDEFALILHDIHQDQDVVPIAQKLIEAVAQPVPL---------DGREVVV 719 Query: 645 HYSI-TPLSTLDGSNIGSVLVIQDVTESRKMLR-QLSYSASHDAL-THLANRASFEKQLR 701 SI L DG ++ ++ D+ + ++ + L + ++ R + E+ LR Sbjct: 720 TASIGIALFPRDGGDVKNLEKHADIALYHAKEEGKNTFRFYLEELNSTISTRIALEQGLR 779 Query: 702 ILLQT 706 + Sbjct: 780 YAKER 784 >UniRef50_C4ZM30 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZM30_THASP Length = 1002 Score = 662 bits (1709), Expect = 0.0, Method: Composition-based stats. Identities = 147/694 (21%), Positives = 272/694 (39%), Gaps = 27/694 (3%) Query: 418 KRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYE 477 R+ + + ++ W + + ++R EL P + W + Sbjct: 316 HRSRRQLARSKRSFDALIDSRREATCAWRPDTTLLTCNERYAELLGTEAASLPGTR-WID 374 Query: 478 CVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD-GIRHIRALANRVLNKEGEVERLLGI 536 V R I LQ + R+ D R +R L VL++EG + I Sbjct: 375 NVPEAKRAEVHAAIARMLQGAGTLTTDRRLRQADGRTRWLRWLDLPVLDEEGRCVEVHSI 434 Query: 537 NMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEAL 596 D+T K++ L Q L + ++ +V D +I ++N + +G+T EA+ Sbjct: 435 GQDITAQKEVELRLRQ----LALAVEQSPNTIVITDTDGRIEYVNEAFVRTTGYTAAEAI 490 Query: 597 GVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDG 656 G + + ++++ + + + GG+Y +I P+ DG Sbjct: 491 GQNPRLL--NAGKTSAATYADLWATLGRGEVWRGEFINTRKDGGTYTELATIAPIKQADG 548 Query: 657 SNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHAL 716 S V + +D+T R+ ++ A +D LT L NR+ +LR + + L Sbjct: 549 SVSHYVAIKEDITGRREAEARIRQLAYYDTLTGLPNRSLMWDRLRHAIAASARSGASGML 608 Query: 717 VFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE- 775 + +D+D FK +ND+ GH GDALLRE+A + LR D +AR+G D+F +++ + + Sbjct: 609 MLLDIDHFKLLNDTQGHEVGDALLREVAQRLRGALREEDTVARVGDDDFAIVVENLGADR 668 Query: 776 -----SARFIATRIISAVNDY-HFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIAC 829 A IA + V + VGAS G+TL N A V+ QA++A Sbjct: 669 DEAIGRAEKIAEHLHRCVTAPCELGLASGPYHVGASLGLTLFRGRNAAADAVLKQAEVAV 728 Query: 830 YASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNL 889 +K+ GR + + A + RA + L + + N + R + Sbjct: 729 ARAKDDGRNLIRFFSEAMQAVVAARAELELKLR-AALACNGFRLYYQPQLD---RNGRVI 784 Query: 890 WLISLKL-WSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK---GISI 945 +L + EGE+I F + L + V Q + G+S+ Sbjct: 785 GAEALIRCFDAEGEMISPAAFIPLAEETGLIVPIGEWVLETACAQLRAWQRTPSTAGLSL 844 Query: 946 SLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGC 1001 S+ +S V + +E + P L + + ++ E+ +++++ G Sbjct: 845 SINVSARQFHQPDFVGKVAAAIERHRIRPGGLEIELTESVVIGDIETTVLRMRQIKALGV 904 Query: 1002 RIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTI 1061 R L G + LK D L +D +++ + E ++ I ++ L +K + Sbjct: 905 RFALDDFGTGYSSLSYLKRLPFDQLKIDQMFVRDMEKDTSSEAIVRAILALSRSLDLKVV 964 Query: 1062 AGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDL 1095 A V + L G +L G + P++ Sbjct: 965 AEGVETAAQHELLLTRGCELFQGYLFGRPVPIED 998 Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 58/153 (37%), Gaps = 1/153 (0%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 +K + A+E S + + T+G+ N+A + GY+ E G + L Sbjct: 439 TAQKEVELRLRQLALAVEQSPNTIVITDTDGRIEYVNEAFVRTTGYTAAEAIGQNPRLLN 498 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 + + + G + E ++G L ++ ++ DG+ +++A Sbjct: 499 AGKTSAATYADLWATL-GRGEVWRGEFINTRKDGGTYTELATIAPIKQADGSVSHYVAIK 557 Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWE 444 EDI + E +QL TL +W+ Sbjct: 558 EDITGRREAEARIRQLAYYDTLTGLPNRSLMWD 590 Score = 78.8 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 47/307 (15%), Positives = 95/307 (30%), Gaps = 14/307 (4%) Query: 253 DPSLLATPRTYLMSHMPW-----LPFLLILLPANIMTMVMYAFRAERKHISESETHFRNA 307 P + R PW + ++ L ++ + A R+ ++ S+ F Sbjct: 273 YPFYVVIGRAISEQFAPWRQTATVATIIALATLGLLLALQAALHRSRRQLARSKRSFDAL 332 Query: 308 MEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLI 367 ++ + L N+ + LG L G + + + +++ Sbjct: 333 IDSRREATCAWRPDTTLLTCNERYAELLGTEAASLPGTRWIDNVPEAKRAEVHAAIARML 392 Query: 368 SGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQL 427 G T + ++R +G W V +G + + +DI K E +Q Sbjct: 393 QGA-GTLTTDRRLRQADGRTRWLRWLDLPVLDEEGRCVEVHSIGQDITAQKEVELRLRQ- 450 Query: 428 MERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHA 487 + LA E I + I ++ + A Sbjct: 451 ---LALAVEQSPNTIVITDTDGRIEYVNEAFVRTTGYTAAEAIGQNP--RLLNAGKTSAA 505 Query: 488 EKV-IRDSLQSRSPFKLEFRITVKDGIRHIR-ALANRVLNKEGEVERLLGINMDMTEVKQ 545 + +L ++ EF T KDG + A + +G V + I D+T ++ Sbjct: 506 TYADLWATLGRGEVWRGEFINTRKDGGTYTELATIAPIKQADGSVSHYVAIKEDITGRRE 565 Query: 546 LNEALFQ 552 + Q Sbjct: 566 AEARIRQ 572 >UniRef50_Q47X88 Sensory box sensor/GGDEF/EAL domain protein n=2 Tax=Colwellia psychrerythraea 34H RepID=Q47X88_COLP3 Length = 1086 Score = 662 bits (1708), Expect = 0.0, Method: Composition-based stats. Identities = 161/702 (22%), Positives = 284/702 (40%), Gaps = 21/702 (2%) Query: 408 IAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPH 467 + E + +++ R+ + IGIW + +K L I Sbjct: 376 LGFNEMATSFQNLMIDKEEISSRLRAIIDNSPIGIWFTGIDGRYHFVNKTFCNLAGIKEE 435 Query: 468 IKPNW--QVWYECVLPEDRQHAEKVIRDSLQSRSPF-KLEFRITVKDGIRHIRALANRVL 524 N E + E H + +L SP E + ++ Sbjct: 436 DMLNTPSSNLAELLGDEIAHHCLDSDKAALAQDSPHVSFETIPRSNAKPYILEITKVKLK 495 Query: 525 NKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVA 584 N +GEV L+GI+ D+T +Q E L + I + EA++ D +I +NP Sbjct: 496 NAQGEVVGLIGISKDITNKRQQEEDL----KLADIVYQNSSEAMMITDSKNEIIAINPAL 551 Query: 585 EKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDV 644 +++G++ E +G + N + ++ + ++ ++G Y Sbjct: 552 SEITGYSSSELIGKNPNVF--SSGKQNPEFYQLMWEEIKLTGTWQGEIWNTKKNGKEYPE 609 Query: 645 HYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILL 704 SI+ + G+ + + D+TE +K + A +D+LT+L NR F +L + Sbjct: 610 WLSISTIYDDYGNVFRRIALFSDITEKKKKDALILRQAKYDSLTNLPNRIMFIDRLEQEI 669 Query: 705 QTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDE 764 + + +Q+ AL+FIDLD FK +ND+ GH GDALL E + +R D +ARLGGDE Sbjct: 670 KVSHRKNQKFALIFIDLDNFKKINDTRGHVYGDALLIEAGKRITHCIREVDTVARLGGDE 729 Query: 765 FGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMS 823 F +LL D ++ + I +++ +++ FI + + + AS G+T+ ++ E++ Sbjct: 730 FTILLSDIADIHNVESICQKVLQTLSEPFFISKMYTY-ISASLGVTIYPNDASSTLELLK 788 Query: 824 QADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRI 883 AD A Y +KN GR R + + + +++ + I NQL + + + Sbjct: 789 NADQAMYLAKNLGRNRFCYFTASMQEEALDHLEL-INDLRKAISLNQLEVFYQPIVELQT 847 Query: 884 PEARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQA--AKAVAS 940 R +L W ++ F + L + VF + Q K Sbjct: 848 GVIRK--AEALLRWKHPVRGMVSPAEFIPLAEESGLIIEIGDWVFKQTVQHINTCKDQLG 905 Query: 941 KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH----AESVQKL 996 I IS+ S + D L L + LP + + I ++++ E + K Sbjct: 906 LDIQISVNKSPVQFRESIDQLDWLAYLAENQLPGENIVIEITEGLLMNNNTSTMERLSKF 965 Query: 997 RLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRL 1056 R AG + + G + LK DYL +D N+ D +L I AQ+L Sbjct: 966 RSAGIGLSMDDFGTGYSSLSYLKKFALDYLKIDQSFTRNIAPGSEDMILSEAIITMAQKL 1025 Query: 1057 GMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 G+K IA + M+ L G G D G + P + + Sbjct: 1026 GLKVIAEGIETKEQMELLIGAGCDYGQGYYFSRPIPAEDFLQ 1067 Score = 88.4 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 46/282 (16%), Positives = 109/282 (38%), Gaps = 18/282 (6%) Query: 298 SESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGL---TFQQLTWPE 354 E + R ++ S IG+ G +G++ NK C G +E++ +L E Sbjct: 393 EEISSRLRAIIDNSPIGIWFTGIDGRYHFVNKTFCNLAGIKEEDMLNTPSSNLAELLGDE 452 Query: 355 DLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDI 414 + L + ++ + S E N + +++ G + I +DI Sbjct: 453 IAHHCLDSDKAALAQDSPHVSFET-IPRSNAKPYILEITKVKLKNAQGEVVGLIGISKDI 511 Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI--PPHIKPNW 472 ++ E+ + + + + + K I + + + E+ I N Sbjct: 512 TNKRQQEEDLKLAD----IVYQNSSEAMMITDSKNEIIAINPALSEITGYSSSELIGKNP 567 Query: 473 QVWYE-CVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA-NRVLNKEGEV 530 V+ PE +++ + ++ ++ E T K+G + L+ + + + G V Sbjct: 568 NVFSSGKQNPE----FYQLMWEEIKLTGTWQGEIWNTKKNGKEYPEWLSISTIYDDYGNV 623 Query: 531 ERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCID 572 R + + D+TE K+ + + ++ + +L ++ ++ ID Sbjct: 624 FRRIALFSDITEKKKKDALILRQAKY--DSLTNLPNRIMFID 663 Score = 69.9 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 57/380 (15%), Positives = 130/380 (34%), Gaps = 22/380 (5%) Query: 282 IMTMVMYAFRAERKHISESETHFRNA-MEYSAIGMALVGTEGQWLQTNKALCQFLGYSQE 340 ++ ++ + K E + + + S+ M + ++ + + N AL + GYS Sbjct: 501 VVGLIGISKDITNKRQQEEDLKLADIVYQNSSEAMMITDSKNEIIAINPALSEITGYSSS 560 Query: 341 ELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHT 400 EL G + + + Q + + I T+ E +NG L++S + Sbjct: 561 ELIGKNPNVFSSGKQNPEFYQLMWEEIK-LTGTWQGEIWNTKKNGKEYPEWLSISTIYDD 619 Query: 401 DGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSW--DKRM 458 G IA DI E K+ + + + + +L N I + + S +++ Sbjct: 620 YGNVFRRIALFSDITEKKKKDALILRQAKYDSLTNLPNRIMFIDRLEQEIKVSHRKNQKF 679 Query: 459 FELYEIPPHIKP----NWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD--G 512 ++ + K V+ + +L E + IR+ EF I + D Sbjct: 680 ALIFIDLDNFKKINDTRGHVYGDALLIEAGKRITHCIREVDTVARLGGDEFTILLSDIAD 739 Query: 513 IRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCID 572 I ++ ++ +VL E + + ++ + L + L + +A+ Sbjct: 740 IHNVESICQKVLQTLSEPFFISKMYTYISASLGVTIYPNDASSTLEL-LKNADQAMYLAK 798 Query: 573 MAMKITFMNPVAEKMSGWTQEEALGV--PLLTVLHITFGDNGPLMENIYSADTSRSAIEQ 630 + + QEEAL + + + + + + Sbjct: 799 NLGR-----NRFCYFTASMQEEALDHLELINDLRKAISLNQLEVFYQPIVELQTGVIRKA 853 Query: 631 DVVLHCRSGGSYDVHYSITP 650 + +L + + V ++P Sbjct: 854 EALLRWK----HPVRGMVSP 869 >UniRef50_A4Y0Z3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=13 Tax=Pseudomonas RepID=A4Y0Z3_PSEMY Length = 960 Score = 662 bits (1708), Expect = 0.0, Method: Composition-based stats. Identities = 166/761 (21%), Positives = 317/761 (41%), Gaps = 32/761 (4%) Query: 342 LRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTD 401 L + Q + L +L+ ++ G + E R +R Sbjct: 203 LVQRSLLQRFHNQALIANLEHAKQRAEGLNEELAREVEQRRRAERE---------LRGAH 253 Query: 402 GTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFEL 461 G + E EL + R+ LA EA +G+W+W+L+ + + EL Sbjct: 254 GELE--MRVAERTLELDEATHALGKSQARLALALEASELGLWDWDLESDQVHHS-HLREL 310 Query: 462 YEIPPH-IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRS-PFKLEFRITVKDGIRHIRAL 519 + + P ++ + + P+D + + + ++ RS +++E+R+ DG Sbjct: 311 FGLEPEQVQVMLRDLTPRLHPDDLPRLRRALVEHMKGRSEDYQIEYRVRHVDGHWVWVED 370 Query: 520 ANRV--LNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKI 577 R + G V R+LG D++ +Q + + ++ E + +D ++ Sbjct: 371 RGRAVERDAAGRVRRMLGTRRDVSARRQQEQE----QRLAATVFEAASEGIFILDPDYRV 426 Query: 578 TFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCR 637 +N ++G+++EE +G + ++ I + + I + + +++ + Sbjct: 427 LAVNRAFSAVTGYSREEVVGRTVTSL--IGSREMRRQYQMIRQELDGSGSWQGELIETRK 484 Query: 638 SGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFE 697 SG Y + + G V D+T R+ +L Y + +D LT LANR+ F+ Sbjct: 485 SGELYPQWLQLNLVRDASGRPSHIVGFFADLTARREAEERLRYLSHYDELTGLANRSLFK 544 Query: 698 KQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVL 757 ++L Q + + ALV IDLDRFK +NDS GH D LLR+++ + + +D + Sbjct: 545 ERLHEASQRARQSGRSIALVHIDLDRFKLLNDSLGHEVADQLLRQMSRRLTQAVPEADCI 604 Query: 758 ARLGGDEFGLLLPD-CNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNH 816 ARL GDEF +LL ++ S +A+R+++ + G V AS GI+L+ D Sbjct: 605 ARLSGDEFAILLDAYGSLSSLARVASRLLAKLR-LPMDVGGHELVVSASLGISLLPDYAR 663 Query: 817 QAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAH 876 + ++SQA++A +K+ G + A ER + ++ + I+E QL + Sbjct: 664 EIGALISQANMAVQHAKHLGGNTFQFFTDNLQACTLERLQLE-NQLRKAIEEGQLEVFYQ 722 Query: 877 GVASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAK 936 + + N ++ + ++ F + L + V + +QA + Sbjct: 723 PKLNL-ADDQLNAAEALVRWRHPQQGLVAPGEFIGLAEETGLIAPIGEFVLRQACRQARQ 781 Query: 937 AVAS--KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESV- 993 I +S+ +SV L L + + + LE + L P+ L L + +LD+ +SV Sbjct: 782 WQQQGLAEIRVSVNISVYQLRQGNLTSLVRQVLEETGLAPQYLELELTESQLLDNVDSVV 841 Query: 994 ---QKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQ 1050 ++LR G ++ + G + LK Y+ +D ++ D + I Sbjct: 842 VTFRQLRELGVKLAIDDFGTGYSSLSYLKRFPVHYVKIDQTFIRDLSPGGEDAAITRAII 901 Query: 1051 GHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQ 1091 A L +K +A V MD L D I G +I+ Sbjct: 902 AMAHSLELKVVAEGVETQAQMDFLKSQNCDEIQGYLISRPV 942 >UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P0M4_CHRVO Length = 633 Score = 662 bits (1708), Expect = 0.0, Method: Composition-based stats. Identities = 138/619 (22%), Positives = 258/619 (41%), Gaps = 20/619 (3%) Query: 489 KVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNE 548 + + P E + + R++ N+ LN +G+ L D++ +Q Sbjct: 15 EALFRHPGGAYPLTFETQDGEGESERYLEVTVNQ-LNYQGDA-YLCATARDISGRRQTER 72 Query: 549 ALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITF 608 L +S EA++ D +I +N ++G+ + E G + + Sbjct: 73 QL----RLAAQVFESSNEAILISDPDNRILTVNRAFGHITGYGEAEVRGSKASMLF--SD 126 Query: 609 GDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDV 668 + ++ R ++ +SG + +I+ L G V + D+ Sbjct: 127 RHEPAFFQQMWQTLQQRGQWSGEIWNRRKSGEHFPCWVNISVLQDGQGEISHFVALFTDI 186 Query: 669 TESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVN 728 +E ++ ++ + A +DALT L NR +L ++ H + A++F+DLD FK +N Sbjct: 187 SERKEQEARVQHMAEYDALTDLPNRVLVNDRLHQAIRQAELQHNQLAVLFVDLDHFKNIN 246 Query: 729 DSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN-VESARFIATRIISA 787 D+ GH AGD LL+E+A + +R D + R GGDEF L+LP N A IA RI+ Sbjct: 247 DTLGHCAGDELLKEVARRLAGAVRGLDTVGRTGGDEFVLILPSINQPGEAAQIAERILRT 306 Query: 788 VNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQ 847 + F VG S GI+L+ D+ ++ AD+A Y +K GR Y + Sbjct: 307 IQQ-PFQIGEHSLVVGCSIGISLMPDDGSDIQTLLMNADLAMYHAKAHGRNTFRFYTREM 365 Query: 848 AAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDE 906 +ER M + R +++ QL ++ + R L +L W + +I Sbjct: 366 NTQVAERLLME-NRLRRAMEQEQLYLVYQPQYD--MAGQRLLGCEALLRWRDPDEGLIMP 422 Query: 907 QTFRRSFSDPALSHALDRRVFHEFFQQAAKAV--ASKGISISLPLSVAGLSSATLVNDLL 964 F D L L R V + +QA+ + + + +++ +S L ++D+ Sbjct: 423 GRFIPVAEDTGLIVPLGRWVLDQACRQASLWLRAGLEPMRVAVNVSAHQLMRHDFIDDVR 482 Query: 965 EQLENSPLPPRLLHLIIPAEAILDHAESVQK----LRLAGCRIVLSQVGRDLQIFNSLKA 1020 E L+ LP L L + ++ A+ + ++ G R+ + G LK Sbjct: 483 EALQRHALPGHCLELEVTESTLMADADLASRQLAVIKAMGVRLAIDDFGTGYSSLAYLKR 542 Query: 1021 NMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVD 1080 D + +D +++ G+ + +++ I A LGM+T+A V L +G + Sbjct: 543 FAPDLVKIDRSFISDLPGDEENAAIVSAIVHLAGALGMETLAEGVENENQQRFLQTLGCE 602 Query: 1081 LIYGEVIADAQPLDLLVNS 1099 + G ++ +++ Sbjct: 603 AMQGYLLGSPLAEEMMTRR 621 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 54/141 (38%), Gaps = 1/141 (0%) Query: 294 RKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWP 353 R+ E S + + + + L N+A GY + E+RG L Sbjct: 67 RRQTERQLRLAAQVFESSNEAILISDPDNRILTVNRAFGHITGYGEAEVRGSKASMLFSD 126 Query: 354 EDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIED 413 QQ+ + + + +S E ++G+ + +S+++ G +F+A D Sbjct: 127 RHEPAFFQQMWQTLQ-QRGQWSGEIWNRRKSGEHFPCWVNISVLQDGQGEISHFVALFTD 185 Query: 414 INELKRTEQVNQQLMERITLA 434 I+E K E Q + E L Sbjct: 186 ISERKEQEARVQHMAEYDALT 206 >UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Oxalobacter formigenes RepID=C3X2S2_OXAFO Length = 1049 Score = 661 bits (1707), Expect = 0.0, Method: Composition-based stats. Identities = 131/641 (20%), Positives = 248/641 (38%), Gaps = 20/641 (3%) Query: 468 IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSP-FKLEFRITVKDGIRHIRALANRVLNK 526 ++ N +W + L E A K + ++ + + + + VLN Sbjct: 408 VRENKPIWMQDFLHE---PAMKHWQKHIEHFKWRSSAILPLHRNGNVIGVMFFYSNVLNA 464 Query: 527 --EGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVA 584 E LL + D+ + E Q + I S E ++ +D I +N Sbjct: 465 FTESSQRLLLELVEDIDFALEHFEKEEQLQLSAQIFAQSS-EGIMLLDPNCHIVMVNSAF 523 Query: 585 EKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDV 644 ++G+++EE LG + + + ++ A + + +V + G Y Sbjct: 524 THITGYSEEETLGRNPKML--ASGQHDRNFYATMWEAIETEGRWQGEVWNRRKDGSLYPE 581 Query: 645 HYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILL 704 I + G+ + D+TE ++ ++ + A D LT L NR + + + Sbjct: 582 WLLIQTMRDSRGTLTHYIGTFTDLTERKETEERVQWLAHFDPLTGLPNRTLLHIRSNLAI 641 Query: 705 QTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDE 764 H+ AL+F+DLD FK VNDS GH GD LL++ + +++ +R D ++RLGGDE Sbjct: 642 SLAQRRHEPLALMFLDLDNFKNVNDSLGHGVGDELLKQFSQRLVNAVREQDTISRLGGDE 701 Query: 765 FGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQ 824 F L+LP + + A ++A R+++ + + E + S GI + + + Sbjct: 702 FVLVLPGTDTDGAAYLAERLLN-IAARQYNIERHEINLTVSIGIAMYPTDGTDFDTLWRS 760 Query: 825 ADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIP 884 AD A Y +K GR + + A + + + R ++ NQ ++ + Sbjct: 761 ADAAMYRAKQSGRNDYCFFTTEMQARSARTLQID-NALRRALERNQFSLVYQP--QLSLN 817 Query: 885 EARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS--K 941 R + +L W + F + V +Q + K Sbjct: 818 TNRIVGFEALIRWTHPQFGNTPPDEFIPIAESNGQIIPIGEWVLKTAVRQLRLWQDNGLK 877 Query: 942 GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLR 997 ++IS+ LS L ++ LE + + P L L + +++ + +LR Sbjct: 878 DVTISVNLSAVQFRHPRLPELVMAILEEAGVSPECLQLELTEGVAMENPLAAITVIDELR 937 Query: 998 LAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLG 1057 G RI + G LK L +D ++ + D +++ + A LG Sbjct: 938 KKGIRISIDDFGTGYSSLTYLKRFNVYSLKIDRSFVQDLPNDTEDMAIVSAVISLADSLG 997 Query: 1058 MKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 M T+A V ++ L G I G ++ D + + Sbjct: 998 MITVAEGVETKEQLEFLRSRGCTEIQGYYLSRPLQADAVFS 1038 Score = 79.9 bits (196), Expect = 6e-13, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 68/182 (37%), Gaps = 11/182 (6%) Query: 314 GMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINT 373 G+ V + +W+ N LC+ GY+ EE + +L ++ +E L G+I+ Sbjct: 2 GILSVSLD-KWIHFNDKLCEIFGYTPEEFGKKGWNELCDTPCAEENRG-IESLKRGDIDE 59 Query: 374 YSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITL 433 + EK + +NG A + V DG P Y + +EDI E K+ + +L + Sbjct: 60 FREEKAFRRKNGRNAIAEVHFRCVAKDDGAPDYLVVTVEDITERKKAQTEIYRLSQLYAT 119 Query: 434 ANEAGGIGIWEWELKP-------NIFSWDKRMFEL--YEIPPHIKPNWQVWYECVLPEDR 484 + + K I + R F + + + +PE+ Sbjct: 120 LSHCNQAIVHSKTEKELFQQICYGIVHYSGRRFTMAWVGLIDENAEKVDMTVSYGIPEEL 179 Query: 485 QH 486 Sbjct: 180 AE 181 Score = 78.8 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 36/172 (20%), Positives = 64/172 (37%), Gaps = 7/172 (4%) Query: 263 YLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEG 322 L + LL+ L +I + + + E+ +S S+ G+ L+ Sbjct: 461 VLNAFTESSQRLLLELVEDIDFALEHFEKEEQLQLSA------QIFAQSSEGIMLLDPNC 514 Query: 323 QWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYN 382 + N A GYS+EE G + L + + + I E + E Sbjct: 515 HIVMVNSAFTHITGYSEEETLGRNPKMLASGQHDRNFYATMWEAIETE-GRWQGEVWNRR 573 Query: 383 RNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLA 434 ++G + L + +R + GT ++I D+ E K TE+ Q L L Sbjct: 574 KDGSLYPEWLLIQTMRDSRGTLTHYIGTFTDLTERKETEERVQWLAHFDPLT 625 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 16/117 (13%), Positives = 44/117 (37%), Gaps = 3/117 (2%) Query: 567 AVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRS 626 ++ + + K N ++ G+T EE + + +E++ D Sbjct: 2 GILSVSLD-KWIHFNDKLCEIFGYTPEEFGKKGWNELCDTPCAEENRGIESLKRGDIDE- 59 Query: 627 AIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSAS 683 ++ ++G + ++ DG+ V+ ++D+TE +K ++ + Sbjct: 60 -FREEKAFRRKNGRNAIAEVHFRCVAKDDGAPDYLVVTVEDITERKKAQTEIYRLSQ 115 >UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMU1_THISH Length = 862 Score = 661 bits (1707), Expect = 0.0, Method: Composition-based stats. Identities = 177/849 (20%), Positives = 304/849 (35%), Gaps = 61/849 (7%) Query: 301 ETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDL 360 E R +E G+ L+ G + N A+ + GY ++E+ G L D + Sbjct: 19 EGVLRAVLEEMVDGVVLINRLGIIREVNPAVTRIFGYERKEMLGANVSLLVPSPDRERHD 78 Query: 361 QQVEKLIS---GEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINEL 417 Q + + G I ++G + LAVS V+ G F + DI+E Sbjct: 79 QYLRNYLQTGEGRIIGVGRTVHGQRKDGSLFPMELAVSEVK--AGGEHLFAGIVRDISER 136 Query: 418 KRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSW-DKRMFELYEIPPHIKPNWQVWY 476 + Q + R + + GI I + + + S+ + ++ IP + Sbjct: 137 HQFHQTL--ALFRRAMDSAYNGIAIADVDAEGERISYANAAFAQITGIPAVDLLGRSLTL 194 Query: 477 ECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA-NRVLNKEGEVERLLG 535 ED Q ++ S + R DG + + + N+ GE+ + + Sbjct: 195 LACEGEDGQTCTAMVSQMRTGGS-MRRTLRCQRPDGSLFWNDVTLSPIFNERGEISQCIA 253 Query: 536 INMDMTEVKQLNEALFQEKERLHITLDSIGEAV--------------------------- 568 + D T +K+ +AL + ++ L +++ E + Sbjct: 254 VLADATALKESEQALRRSRDALERQVEARTENLTEVVRQLRREIEERTRVESALRLSEQR 313 Query: 569 ------------VCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLME 616 ++A + + + G E + I D L E Sbjct: 314 LANAQRIARLGHWEWEIATGRLYWSAEVYNLLGLGPEFTTPDYERFLEMIPGDDRQRLQE 373 Query: 617 NIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLR 676 I E D + C G +H + +G + QD+TE Sbjct: 374 AIARCLEHGLPYEIDHRITCPDGSERILHEDGELVYDDEGKPLLLRGTAQDITERHDYQN 433 Query: 677 QLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAG 736 +L + A+ D +T L NR F+ +L+ L + AL+F+D+D+FK VNDS GH G Sbjct: 434 RLRHLANFDPVTGLPNRTLFKDRLQHALANATRNQRLVALLFLDMDQFKNVNDSLGHMMG 493 Query: 737 DALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIW 795 D LLR+ A +L +R D +AR GGDEF +LL + + E A A R++ A+ F Sbjct: 494 DELLRQTAERLLGCVREGDTVARFGGDEFIILLENIEHSEQASLSAERVVQAMRR-PFRL 552 Query: 796 EGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERA 855 H S GI+L +++ +++ AD A Y +K G Y P ER Sbjct: 553 GEHEHFCNVSIGISLYPEDDEHPEDLVRHADSAMYLAKAQGGAGYRFYTPDMNTRAMERL 612 Query: 856 AMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFS 914 + ++ + ++ Q + R R + +L W E ++ F Sbjct: 613 LLQ-NQLHQALELGQFQVHYQPQMDLR--SGRICGVEALVRWQHPERGLVPPAEFIPMAE 669 Query: 915 DPALSHALDRRVFHEFFQQAAKAVAS--KGISISLPLSVAGLSSATLVNDLLEQLENSPL 972 D L L V ++ +++S+ LS L + L S L Sbjct: 670 DTGLIEPLGEWVLRTAAREVRGWQDRGLPALNLSVNLSPRQFRHPDLPGMVERVLAESGL 729 Query: 973 PPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLL 1028 L L I I+ E ++ ++ G R+ + G LK L + Sbjct: 730 EAERLELEITERLIIVDLEHTVDTLSRIARLGVRVSIDDFGTGHSSLAYLKRLPVHALKI 789 Query: 1029 DGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIA 1088 D E + + D + + + L ++ IA V L G D + G IA Sbjct: 790 DREFVDGIGQDSDDAAIAEAVIALGRTLRLQVIAEGVETREQASFLREHGCDAVQGFFIA 849 Query: 1089 DAQPLDLLV 1097 P L Sbjct: 850 RPMPAGELT 858 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 67/306 (21%), Positives = 113/306 (36%), Gaps = 47/306 (15%) Query: 292 AERKHISESETHFRNAMEYSAIGMAL--VGTEG-QWLQTNKALCQFLGYSQEELRGLTFQ 348 +ER ++ FR AM+ + G+A+ V EG + N A Q G +L G + Sbjct: 134 SERHQFHQTLALFRRAMDSAYNGIAIADVDAEGERISYANAAFAQITGIPAVDLLGRSLT 193 Query: 349 QLTWP-EDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYF 407 L ED V ++ +G + R +G + W + +S + + G Sbjct: 194 LLACEGEDGQTCTAMVSQMRTG--GSMRRTLRCQRPDGSLFWNDVTLSPIFNERGEISQC 251 Query: 408 IAQIED---------------------------------------INELKRTEQVNQQLM 428 IA + D I E R E + Sbjct: 252 IAVLADATALKESEQALRRSRDALERQVEARTENLTEVVRQLRREIEERTRVESALRLSE 311 Query: 429 ERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHI-KPNWQVWYECVLPEDRQHA 487 +R+ A +G WEWE+ W ++ L + P P+++ + E + +DRQ Sbjct: 312 QRLANAQRIARLGHWEWEIATGRLYWSAEVYNLLGLGPEFTTPDYERFLEMIPGDDRQRL 371 Query: 488 EKVIRDSLQSRSPFKLEFRITVKDGI-RHIRALANRVLNKEGEVERLLGINMDMTEVKQL 546 ++ I L+ P++++ RIT DG R + V + EG+ L G D+TE Sbjct: 372 QEAIARCLEHGLPYEIDHRITCPDGSERILHEDGELVYDDEGKPLLLRGTAQDITERHDY 431 Query: 547 NEALFQ 552 L Sbjct: 432 QNRLRH 437 Score = 66.1 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 56/136 (41%), Gaps = 4/136 (2%) Query: 546 LNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLH 605 ++ + L L+ + + VV I+ I +NP ++ G+ ++E LG + ++ Sbjct: 11 MSRYDTLNEGVLRAVLEEMVDGVVLINRLGIIREVNPAVTRIFGYERKEMLGANVSLLVP 70 Query: 606 ITF--GDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVL 663 + L + + + + + V + G + + +++ + G Sbjct: 71 SPDRERHDQYLRNYLQTGEGRIIGVGRTVHGQRKDGSLFPMELAVSEVK--AGGEHLFAG 128 Query: 664 VIQDVTESRKMLRQLS 679 +++D++E + + L+ Sbjct: 129 IVRDISERHQFHQTLA 144 >UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZE4_9PROT Length = 727 Score = 661 bits (1707), Expect = 0.0, Method: Composition-based stats. Identities = 126/565 (22%), Positives = 228/565 (40%), Gaps = 21/565 (3%) Query: 546 LNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLH 605 L +++ L +S V+ D I +NP +++G+ EE G + Sbjct: 163 HTRGLIDQRDLLETVFESSYSGVMITDAKGNIVEVNPAFTRITGYQSEEVQGRNPHLL-- 220 Query: 606 ITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVI 665 + + ++ + E ++ ++G Y +I P+ + G+ + V + Sbjct: 221 ASGRHDHTFYREMWDDILANGHWEGEIWDRRKNGEVYPSWMNINPVRDISGNLLYYVGIF 280 Query: 666 QDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFK 725 DVT+ ++ Q+ A +D LT L NR ++L+ + A++F+DLD FK Sbjct: 281 SDVTKRKEAEAQIHQLAFYDPLTELPNRRLLNERLQQAFSVGARSGHHGAVLFLDLDNFK 340 Query: 726 AVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLL------PDCNVESARF 779 +ND+ GH GD LL E+A + S +R+ D +ARLGGDEF ++L PD A Sbjct: 341 TLNDTKGHDIGDQLLIEVAKRLNSCVRNGDTVARLGGDEFVVVLESLSSVPDEAATQADL 400 Query: 780 IATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGR 839 +A +I A++ + VHR S G+ + + EV+ AD A Y +K GR Sbjct: 401 VAEKIRYALSQ-PYQLANHVHRTTPSIGVVMFRGHQQSLEEVLKFADTAMYQAKTAGRNA 459 Query: 840 VTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLW-LISLKLWS 898 + Y+P A+ A +E ++++ NQL + R L + L+ Sbjct: 460 IRFYDPVMQASIEA-RAELEEELRQVVERNQLRLYYQVQMD---SSNRPLGAEVLLRWQH 515 Query: 899 CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK---GISISLPLSVAGLS 955 E ++ F + + V Q + +++++ +S Sbjct: 516 PERGLVSPAQFIPMAEETGHIVPIGLWVLQTACTQLKVWQSDPLTCDLTLAVNVSAKQFR 575 Query: 956 SATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLSQVGRD 1011 S V+ + L S P LL L + +L++ E +++L+L G + G Sbjct: 576 SMDFVSQVQRTLAQSGAKPSLLKLELTESLVLENVEDTIAKMRELKLLGVSFSMDDFGTG 635 Query: 1012 LQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVM 1071 LK D + +D ++ + D ++ I ++ LG+ IA V Sbjct: 636 YSSLQYLKRLPLDQIKIDQSFVRDIASDSNDAAIVQTIIAMSEVLGLNVIAEGVETEAQR 695 Query: 1072 DTLSGIGVDLIYGEVIADAQPLDLL 1096 + L G G + PL Sbjct: 696 EFLDLRGCHAFQGYLFGRPAPLAEF 720 Score = 91.1 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 66/179 (36%), Gaps = 6/179 (3%) Query: 257 LATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMA 316 + P+T L P L L A ++ + + + E S G+ Sbjct: 130 VEIPKTSLPLTTMLQPVLAHLAKAIVL---CRNNDVHTRGLIDQRDLLETVFESSYSGVM 186 Query: 317 LVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPE-DLNKDLQQVEKLISGEINTYS 375 + +G ++ N A + GY EE++G L D + + +++ + Sbjct: 187 ITDAKGNIVEVNPAFTRITGYQSEEVQGRNPHLLASGRHDHTFYREMWDDILAN--GHWE 244 Query: 376 MEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLA 434 E +NG+V + + ++ VR G LY++ D+ + K E QL L Sbjct: 245 GEIWDRRKNGEVYPSWMNINPVRDISGNLLYYVGIFSDVTKRKEAEAQIHQLAFYDPLT 303 >UniRef50_B8DLV2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLV2_DESVM Length = 896 Score = 661 bits (1706), Expect = 0.0, Method: Composition-based stats. Identities = 161/841 (19%), Positives = 297/841 (35%), Gaps = 59/841 (7%) Query: 303 HFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQ 362 R ++ + + L EG++L N G +++ GL+ + + + L + Sbjct: 50 LLRALLDNPLVALFLRDGEGRYLAANHLYADLAGVPGKDVVGLSPRDIFPHAVASALLDE 109 Query: 363 VEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDI-------- 414 ++ E +T + +R + +A + P + D+ Sbjct: 110 DRRVA--EDSTPLLCERMLPADEAERVFRVAKLPLPPEVAGPGAVLGLAFDVTALVEAEI 167 Query: 415 -NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQ 473 E+++ + R E ++ I ++ + P + + Sbjct: 168 EEEVRQRTAALAESTARFRALFELAPDAVYVRGEGGRIVDCNRAAERMSGHPRETLLSLR 227 Query: 474 VWYECVLPEDRQHAEKVI------------------RDSLQSRSP---------FKLEFR 506 + + P+ + ++ R +P F +E Sbjct: 228 T-ADLLPPDIEVRIDNLLTGCPLPVATHPDSTPAEPRQGTDGANPGSGFCPTGGFCMEGI 286 Query: 507 ITVKDGIRHIRALANRVLNK--EGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSI 564 T G + G+ L + D++ + + L+ Sbjct: 287 CTAAHGPHEAEVSVEPLPLSLLRGKGMTALVVVHDISGRRTAERQARLFERVFRNALE-- 344 Query: 565 GEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTS 624 + D I +NP ++G+ ++A+G + + + E+++ A Sbjct: 345 --GICITDPEGIIVAVNPAFTTITGYPADDAVGQSPRLLK--SHHHDSAFYEDMWRALVE 400 Query: 625 RSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASH 684 E ++ R+G Y SI+ + G V V D+TE + Q+ + A H Sbjct: 401 EGRWEDEIWNRRRNGEVYPEWLSISAIPGPTGRTEYYVAVFHDITELKAKESQIQHQAHH 460 Query: 685 DALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELA 744 DALT L NRA +L + + ++ A++ +DLD FK VNDS GH GD L++ A Sbjct: 461 DALTGLPNRALLRDRLGMAINGARREDRKVAVLSVDLDNFKQVNDSLGHMVGDIYLQQAA 520 Query: 745 SLMLSMLRSSDVLARLGGDEFGLLLPDCNVE-SARFIATRIISAVNDYHFIWEGRVHRVG 803 M M+R D LAR+GGDEF ++L D E A +A R+++ D + VG Sbjct: 521 EQMRQMVRPQDTLARVGGDEFVVVLQDVEGERDAAQVAERLLARFTD-PVRVQEHELFVG 579 Query: 804 ASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQW 863 AS GI L D+ ++ ADIA +K G+ R ++ P R ++ D Sbjct: 580 ASVGIALFPDDGDDPDTLVRNADIAMSRAKEQGKRRYHLFTPAMNDRAVRRLSLEGD-LH 638 Query: 864 RMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHAL 922 R + + + + +L W +G F L L Sbjct: 639 RALAAGDITAHYQPRVD--LNTGLITGMEALARWIRADGSQEHPAEFIPLAESTGLIVPL 696 Query: 923 DRRVFHEFFQ--QAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLI 980 + +A + +++ LSV LV + + L + LPP LL L Sbjct: 697 GEHMLRLACAKTRALCDAGHADLHVAVNLSVHQFRHRNLVGMVADVLAETGLPPHLLELE 756 Query: 981 IPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANV 1036 I I+ + + +L G + + G LK L +D ++ Sbjct: 757 ITESTIVTDVDHTIRKLNQLAEMGIALSVDDFGTGYSSLYQLKNLPLTSLKIDRSFIRDI 816 Query: 1037 QGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 + D + I A RLG++ +A V P ++ L G + G + + P D Sbjct: 817 PDDPNDAAIAATIITMADRLGLRVVAEGVETPEQLNFLLLEGCHEVQGFLFSRPLPPDEF 876 Query: 1097 V 1097 Sbjct: 877 T 877 Score = 87.2 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 71/498 (14%), Positives = 144/498 (28%), Gaps = 68/498 (13%) Query: 271 LPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKA 330 + L + A + + R ++ES FR E + + + G G+ + N+A Sbjct: 152 VLGLAFDVTALVEAEIEEEVRQRTAALAESTARFRALFELAPDAVYVRGEGGRIVDCNRA 211 Query: 331 LCQFLGYSQEELRGLTFQQL---------------------TWPEDLNKDLQQ-VEKLIS 368 + G+ +E L L L T P+ + +Q + Sbjct: 212 AERMSGHPRETLLSLRTADLLPPDIEVRIDNLLTGCPLPVATHPDSTPAEPRQGTDGANP 271 Query: 369 GE----INTYSMEKRYYNRNG-DVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQV 423 G + ME +G + + G + + + DI+ + E+ Sbjct: 272 GSGFCPTGGFCMEGICTAAHGPHEAEVSVEPLPLSLLRGKGMTALVVVHDISGRRTAERQ 331 Query: 424 NQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPED 483 + GI + + I + + + P D Sbjct: 332 ARLFER----VFRNALEGICITDPEGIIVAVNPAFTTITGYPADDAVGQSPRLLKSHHHD 387 Query: 484 RQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA-NRVLNKEGEVERLLGINMDMTE 542 E + R +L ++ E ++G + L+ + + G E + + D+TE Sbjct: 388 SAFYEDMWR-ALVEEGRWEDEIWNRRRNGEVYPEWLSISAIPGPTGRTEYYVAVFHDITE 446 Query: 543 VKQLNEALFQEKER---------------LHITLDSIGE-----AVVCIDMAMKITFMNP 582 +K + + L + ++ AV+ +D+ +N Sbjct: 447 LKAKESQIQHQAHHDALTGLPNRALLRDRLGMAINGARREDRKVAVLSVDLD-NFKQVND 505 Query: 583 VAEKMSG----WTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRS 638 M G E + + + + + + R A + L R Sbjct: 506 SLGHMVGDIYLQQAAEQMRQMVRPQDTLARVGGDEFVVVLQDVEGERDAAQVAERLLARF 565 Query: 639 GGSYDVHYS--------ITPLSTLDGSNIGSVLVIQDVTESRKMLR-QLSYSASHDALTH 689 V L DG + +++ D+ SR + + Y A+ Sbjct: 566 TDPVRVQEHELFVGASVGIALFPDDGDDPDTLVRNADIAMSRAKEQGKRRYHLFTPAMND 625 Query: 690 LANRAS-FEKQLRILLQT 706 A R E L L Sbjct: 626 RAVRRLSLEGDLHRALAA 643 >UniRef50_Q2W4Z4 Predicted signal transduction protein containing a membrane domain n=4 Tax=Magnetospirillum RepID=Q2W4Z4_MAGSA Length = 831 Score = 661 bits (1705), Expect = 0.0, Method: Composition-based stats. Identities = 135/573 (23%), Positives = 243/573 (42%), Gaps = 13/573 (2%) Query: 530 VERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSG 589 V +L I +E + EA + D +I +NP+ +++G Sbjct: 248 VAGILLIGRRSAGRLTEKALADEETRLAAHVFSNALEATLITDPKGRILRINPMFTELTG 307 Query: 590 WTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSIT 649 + + E +G + + + I+ A + ++ + G + SI Sbjct: 308 YGEAEVVGGNPRIIR--SNHHDADFYAEIWQAIFRDGRWQGEIWNRRKDGQVFVAWESIV 365 Query: 650 PLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNS 709 + G+ + +D+TE + R + A +D LT L NR F+ +L + Sbjct: 366 AVYDEAGAIRYFIGSFRDITEQVEAQRHILRLAHYDVLTDLPNRVLFQDRLERAVVHALR 425 Query: 710 THQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLL 769 ++ AL+F+DLD FK VND+ GH AGD LL+E+A + +R +D +ARLGGDEF ++L Sbjct: 426 HDRQAALLFLDLDGFKKVNDTMGHRAGDDLLKEVAVRLRGCVRMTDTIARLGGDEFTVIL 485 Query: 770 PDCN-VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIA 828 + + A +A +I+++++ FI +GR +G S GI+L + E++ AD A Sbjct: 486 DEISAANDASMVADKILASLHAPIFI-DGRDVFIGTSIGISLFPIDGTSGDELLKHADTA 544 Query: 829 CYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARN 888 Y +K G+GR Y + R + + + ++E Q + + + R Sbjct: 545 MYQAKAAGKGRFNFYSAEMTKREEHRLELETALR-QAVEEGQFQVHYQPQKN--LATNRV 601 Query: 889 LWLISLKLWSCEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK-GISIS 946 +L W +I F + L +D V + ++ + I ++ Sbjct: 602 SGFEALVRWQHPRLGMISPVDFIPLAEEMHLIDRIDMFVMRQACRKGRQWRDQGYDICMA 661 Query: 947 LPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAIL----DHAESVQKLRLAGCR 1002 + LS S L + + LE++ P L L I ++ D E +Q+LR G + Sbjct: 662 VNLSGVNFSRDDLPEQVRQVLEDTGFPAENLELEITESFVIDLEVDQREVLQRLRALGVK 721 Query: 1003 IVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIA 1062 + + G + LK + L +D ++ + D ML++ I G A LG+K +A Sbjct: 722 LAIDDFGTGYSSLSYLKRLPVNTLKIDRSFVRDIARDSRDMMLVSSIIGIAHSLGLKVVA 781 Query: 1063 GPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDL 1095 + + L D I G +IA P + Sbjct: 782 EGIEERDQLAILLSQECDEIQGYLIAKPMPAEQ 814 Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 58/163 (35%), Gaps = 2/163 (1%) Query: 273 FLLILLPANIMTMVMYAFRAERKHISESETHFR-NAMEYSAIGMALVGTEGQWLQTNKAL 331 F L+ + ++ A R K +++ ET + + + +G+ L+ N Sbjct: 243 FWLVGVAGILLIGRRSAGRLTEKALADEETRLAAHVFSNALEATLITDPKGRILRINPMF 302 Query: 332 CQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWAL 391 + GY + E+ G + + ++ + I + E ++G V A Sbjct: 303 TELTGYGEAEVVGGNPRIIRSNHHDADFYAEIWQAIF-RDGRWQGEIWNRRKDGQVFVAW 361 Query: 392 LAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLA 434 ++ V G YFI DI E ++ +L L Sbjct: 362 ESIVAVYDEAGAIRYFIGSFRDITEQVEAQRHILRLAHYDVLT 404 >UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Psychromonas ingrahamii 37 RepID=A1SZA9_PSYIN Length = 777 Score = 660 bits (1704), Expect = 0.0, Method: Composition-based stats. Identities = 151/730 (20%), Positives = 279/730 (38%), Gaps = 56/730 (7%) Query: 411 IEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKP 470 +E NE + ++ ++L R T E IG + + LK I + R L +I Sbjct: 53 LEMQNEELKQARIAEKLHYRYTELFEFAPIGYFSFNLKGVINQVNLRGASLLDIERANLV 112 Query: 471 NWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEV 530 + + C+ +DR + + + E V + AN + + Sbjct: 113 G-KQFSNCLTAQDRNKFNRCLAKAFAGDGIQSFEVLAQVGKHKCWLNIEANLGITETDC- 170 Query: 531 ERLLGINMDMTEVKQLNEALFQE------------------------------KERLHIT 560 L +D+T+ K+ +E L + + R+ T Sbjct: 171 ---LAAVIDITDRKRADEELLFQNDEKGKRTDELVIANKELFFQNAEKEKRVGELRVAAT 227 Query: 561 LDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYS 620 + E + D + I +N +SG++ EE +G L + + + +++ Sbjct: 228 VFETQEGMFVTDANLCILRVNKAFTNISGYSGEEVIGQSPK--LFNSGRQDKAFYKEMWN 285 Query: 621 ADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSY 680 + + A +V +SG Y + +IT + G V +D+T S+ +++ Sbjct: 286 SINTTDAWRGEVSNRSKSGDIYAKNLTITAVRDGKGVVSNYVATFRDITTSKAASEKINN 345 Query: 681 SASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALL 740 A D LT L NR LR +L ++Q AL+F+DLD FK +ND+ GH GD LL Sbjct: 346 LAYFDPLTQLPNRRMLLDSLRHVLTISARSNQHCALLFLDLDNFKTLNDTLGHDVGDLLL 405 Query: 741 RELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESAR------FIATRIISAVNDYHFI 794 +++A+ + +R D++ARLGGDEF +LL + ++++ +A +II + Y + Sbjct: 406 QQVATRLTDCVREGDIVARLGGDEFVVLLENLSLQAIEAANKAKKVAKKIIFELAQY-YQ 464 Query: 795 WEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSER 854 + S G+T+ N E++ QADIA Y SK GR + + R Sbjct: 465 LNMHRYHSTTSIGVTIFSGNETGIEELLKQADIAMYQSKAAGRNTWHFFNKTMQESIIAR 524 Query: 855 AAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSF 913 A M D + + I++NQ + S + L +L W E + F Sbjct: 525 ADMERDLR-KAIEDNQFQLHYQAQVS---SSGQTLGAEALIRWQHPERGQVSPFNFIPLA 580 Query: 914 SDPALSHALDRRVFHEFFQQAAKAVAS---KGISISLPLSVAGLSSATLVNDLLEQLENS 970 + L + + V Q + + + +++ +S L V + L+ Sbjct: 581 EETGLILPIGQWVLDSACAQLKAWQKNPLTQDLVLAVNISAKQLHQEDFVEQVKATLKRH 640 Query: 971 PLPPRLLHLIIPAEAILDHAESV----QKLRLAGCRIVLSQVGRDLQIFNSLKANMADYL 1026 + P L L + ++++ + L G L G LK + + Sbjct: 641 DINPARLKLELTESMLVENISDIITKMNILSKIGISFSLDDFGTGYSSLQYLKKLPLNQI 700 Query: 1027 LLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEV 1086 +D ++ + D ++ I + L + IA V L G G + Sbjct: 701 KIDQSFVRDLITDASDRAIVRTIITMSHSLDISVIAEGVETVEERQYLLDNGCTHYQGYL 760 Query: 1087 IADAQPLDLL 1096 + P++ Sbjct: 761 FSKPVPINEF 770 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 51/146 (34%), Gaps = 1/146 (0%) Query: 290 FRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQ 349 F+ K E + + GM + L+ NKA GYS EE+ G + + Sbjct: 210 FQNAEKEKRVGELRVAATVFETQEGMFVTDANLCILRVNKAFTNISGYSGEEVIGQSPKL 269 Query: 350 LTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIA 409 +++ I + + E +++GD+ L ++ VR G ++A Sbjct: 270 FNSGRQDKAFYKEMWNSI-NTTDAWRGEVSNRSKSGDIYAKNLTITAVRDGKGVVSNYVA 328 Query: 410 QIEDINELKRTEQVNQQLMERITLAN 435 DI K + L L Sbjct: 329 TFRDITTSKAASEKINNLAYFDPLTQ 354 Score = 50.3 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 62/460 (13%), Positives = 141/460 (30%), Gaps = 60/460 (13%) Query: 287 MYAFRAERKHISESET---HFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELR 343 + E K +E + E++ IG +G Q N L + L Sbjct: 53 LEMQNEELKQARIAEKLHYRYTELFEFAPIGYFSFNLKGVINQVNLRGASLLDIERANLV 112 Query: 344 GLTFQQLTWPEDLNKDLQQVEKLISGE-INTYSMEKRYYNRNGDVVWALLAVSL-VRHTD 401 G F +D NK + + K +G+ I ++ + + W + +L + TD Sbjct: 113 GKQFSNCLTAQDRNKFNRCLAKAFAGDGIQSFEVLAQV---GKHKCWLNIEANLGITETD 169 Query: 402 GTPLYFIAQIEDINELKRTEQVN------------------------------QQLMERI 431 +A + DI + KR ++ + R+ Sbjct: 170 -----CLAAVIDITDRKRADEELLFQNDEKGKRTDELVIANKELFFQNAEKEKRVGELRV 224 Query: 432 TLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVI 491 G++ + I +K + +D + K + Sbjct: 225 AATVFETQEGMFVTDANLCILRVNKAFTNISGYSGEEVIGQSPKLFNSGRQD-KAFYKEM 283 Query: 492 RDSLQSRSPFKLEFRITVK-DGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEAL 550 +S+ + ++ E K I V + +G V + D+T K +E + Sbjct: 284 WNSINTTDAWRGEVSNRSKSGDIYAKNLTITAVRDGKGVVSNYVATFRDITTSKAASEKI 343 Query: 551 FQEKERLHITLDSIGEAVVCIDMAMKITFMNPV---AEKMSGWTQEEALGVPLLTVLHIT 607 L + + +D + ++ + + L L Sbjct: 344 --NNLAYFDPLTQLPNRRMLLDSLRHVLTISARSNQHCALLFLDLDNF--KTLNDTLGHD 399 Query: 608 FGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVH---YSITPLSTLDGSNIGSVLV 664 GD L++ + + T + + ++ G + V S+ + + + + + Sbjct: 400 VGD--LLLQQVATRLTDC--VREGDIVARLGGDEFVVLLENLSLQAIEAANKAKKVAKKI 455 Query: 665 IQDVTESRKMLRQLSYSASHDALTHLA-NRASFEKQLRIL 703 I ++ + ++ +S + +T + N E+ L+ Sbjct: 456 IFELAQYYQLNMHRYHSTTSIGVTIFSGNETGIEELLKQA 495 >UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6C0_BREBN Length = 708 Score = 660 bits (1703), Expect = 0.0, Method: Composition-based stats. Identities = 152/667 (22%), Positives = 279/667 (41%), Gaps = 21/667 (3%) Query: 446 ELKPNIFSWDKRMFEL--YEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKL 503 + K I +++ + YE I + ++ P + K + ++S ++ Sbjct: 49 DHKGIILRANEQFCRISKYERSELIGNDHRILNSGYHP---KSFFKEMWSCIRSGQVWRG 105 Query: 504 EFRITVKD-GIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLD 562 E R KD + N+ GE+ + L I D+T KQ+ + L + +E+ I + Sbjct: 106 EIRNCAKDGSYYWVDTTIVPFKNQAGEIYQYLSIRSDITARKQMEDELKRSEEKYRIIAE 165 Query: 563 SIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSAD 622 + + + I++ + +++P +++ T + L I D I A Sbjct: 166 NTSDIISIINLDGEFLYLSPSHKRVWEHTVPDEEIHNLFEW--IVEDDRDIFAYAIQHAF 223 Query: 623 TSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSA 682 ++R + ++ + I P+ +G+ +L+ +DVT+ ++ + + A Sbjct: 224 STRKEYMVECRINTQRNDVIWTESKINPIMDEEGNVTKLLLITRDVTDRKQSEETIHHLA 283 Query: 683 SHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRE 742 HDALT L NR + +QL + A++F+DLDRFK VNDS GH GD LL E Sbjct: 284 YHDALTDLPNRRMYVQQLSKEMMQAKRFQSSLAVLFLDLDRFKDVNDSFGHDVGDMLLIE 343 Query: 743 LASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHR 801 + + + L+ DV+ARLGGDEF ++ + A +A +I+ + F +G V Sbjct: 344 ASKRLQACLKPGDVVARLGGDEFTIMQNQLLDRNEATELAEQIMYQLQR-PFELDGHVFN 402 Query: 802 VGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDE 861 V S GI L + +++ +AD A Y K+ G+ ++P A ER M + Sbjct: 403 VSCSIGIALYPQDGDNPEDLLKRADTALYTVKSRGKNGYDFFDPSMEAKSLERILMENEM 462 Query: 862 QWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSH 920 + + I++ Q + I + + +L W E II F + + Sbjct: 463 R-KAIEQEQFQIYYQPKID--IATSAMTGMEALVRWVHPELGIIPPNRFIPIAEETGMIL 519 Query: 921 ALDRRVFHEFFQQAAKAVASK-GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHL 979 AL + + +Q + +S+ LS + LV + + L+ + L P L L Sbjct: 520 ALGEWILKQACKQNKNWHDQGYTLKVSVNLSARQIYQKDLVEMIKDILQETKLSPHWLEL 579 Query: 980 IIPAEAILDHAES---VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANV 1036 I + E+ +Q++R G +I + G F+ +K+ D + +D ++ Sbjct: 580 EITESIFVKMEEATAVLQQIRDIGIQISIDDFGTGYSSFSYIKSLPVDTIKIDASFIRDI 639 Query: 1037 QGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQP---L 1093 N + ++ I AQ L M IA + L + L G D G + + P Sbjct: 640 HHNQESQAIVKAIVTIAQSLNMNVIAEGIELHDQVAALKENGCDHGQGYLFSKPLPTDDF 699 Query: 1094 DLLVNSS 1100 D L+ Sbjct: 700 DQLLRQE 706 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 72/387 (18%), Positives = 138/387 (35%), Gaps = 41/387 (10%) Query: 307 AMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKL 366 A++ S I +A+ +G L+ N+ C+ Y + EL G + L +++ Sbjct: 38 ALDQSTI-LAITDHKGIILRANEQFCRISKYERSELIGNDHRILNSGYHPKSFFKEMWSC 96 Query: 367 ISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQ 426 I + E R ++G W + ++ G +++ DI K+ E ++ Sbjct: 97 IRS-GQVWRGEIRNCAKDGSYYWVDTTIVPFKNQAGEIYQYLSIRSDITARKQMEDELKR 155 Query: 427 LMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYE--IPPHIKPNWQVWYECVLPEDR 484 E+ + E I L ++E +P N W ++ +DR Sbjct: 156 SEEKYRIIAENTSDIISIINLDGEFLYLSPSHKRVWEHTVPDEEIHNLFEW---IVEDDR 212 Query: 485 QHAEKVIRDSLQSRSPFKLEFRI-TVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEV 543 I+ + +R + +E RI T ++ + + N ++++EG V +LL I D+T+ Sbjct: 213 DIFAYAIQHAFSTRKEYMVECRINTQRNDVIWTESKINPIMDEEGNVTKLLLITRDVTDR 272 Query: 544 KQLNEALFQ--------------------EKERLHITLDSIGEAVVCIDMAMKITFMNPV 583 KQ E + KE + AV+ +D+ + +N Sbjct: 273 KQSEETIHHLAYHDALTDLPNRRMYVQQLSKEMMQAKRFQSSLAVLFLDLD-RFKDVNDS 331 Query: 584 AEKMSGWTQEEALGVPLLTVLHITF------GDNGPLMENIYSADTSRSAIEQDVVLHCR 637 G L L GD +M+N + + + ++ + Sbjct: 332 FGHDVGDMLLIEASKRLQACLKPGDVVARLGGDEFTIMQNQLLDRNEATELAEQIMYQLQ 391 Query: 638 -----SGGSYDVHYSI-TPLSTLDGSN 658 G ++V SI L DG N Sbjct: 392 RPFELDGHVFNVSCSIGIALYPQDGDN 418 Score = 65.7 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 21/148 (14%), Positives = 58/148 (39%), Gaps = 1/148 (0%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + A + + SE +R E ++ ++++ +G++L + + + ++ + Sbjct: 143 ITARKQMEDELKRSEEKYRIIAENTSDIISIINLDGEFLYLSPSHKRVWEHTVPDEEIHN 202 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 + +D + ++ S Y +E R + DV+W ++ + +G Sbjct: 203 LFEWIVEDDRDIFAYAIQHAFS-TRKEYMVECRINTQRNDVIWTESKINPIMDEEGNVTK 261 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLA 434 + D+ + K++E+ L L Sbjct: 262 LLLITRDVTDRKQSEETIHHLAYHDALT 289 >UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LAF7_MAGSM Length = 951 Score = 660 bits (1702), Expect = 0.0, Method: Composition-based stats. Identities = 142/688 (20%), Positives = 280/688 (40%), Gaps = 22/688 (3%) Query: 422 QVNQQLMERITLANEAGGIGIWEWE--LKPNIFSWDKRMFELYEIPPHIKPNWQVWYE-C 478 +V ++ R E+ G++ + L+ + +M ++ + V + Sbjct: 251 RVLRENDARFQALVESIHAGVYRTQVTLERRLVYASAQMHQVAGLSMQQCQEGGVSLKSL 310 Query: 479 VLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLNKEGEVERLLGIN 537 V+PED H ++ + S+++ P+++++RI + + + +G+ G Sbjct: 311 VVPEDWPHVQEALEWSIKTHVPYEMQYRINHPQRGEMWVSDRGRIIKDHQGQPCWFDGAL 370 Query: 538 MDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALG 597 +++ E ++ + L K+ + + EA+V + +I +NP E+++G+ + E LG Sbjct: 371 LNIHEARETEQQLLLAKQ----VVQTASEAIVITNHKNQIMDVNPAYERITGFMRHEVLG 426 Query: 598 VPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGS 657 + + ++ ++ R+G + +I+ + G Sbjct: 427 RNPKITQ--SGRHDASFYATMWKHLVGEGHWSGEIWDRRRNGEIFPKWLAISAIRNRQGV 484 Query: 658 NIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALV 717 V V D++ + +QL +D LT L NR F +L + +++ +L+ Sbjct: 485 ISHFVGVFNDISRQKSTEQQLERLVFYDPLTQLPNRVLFRDRLIHEVGVAERSNKLMSLL 544 Query: 718 FIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN-VES 776 +DLDRFK +ND+ GH GD LL +++ +++ +R SD +ARLGGDEF ++LP E Sbjct: 545 LVDLDRFKIINDTLGHGVGDELLLQVSKRLIASVRKSDTVARLGGDEFAIILPGMERAED 604 Query: 777 ARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGG 836 A +A II+ + F E VGAS GI + + + AD A + +K G Sbjct: 605 AAHVAETIINQL-QVPFSIEENELFVGASIGIAVHGQDGDDYDSLTMNADAAMFKAKESG 663 Query: 837 RGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKL 896 +G + P +++R M + + R + +LM+ + + + +L Sbjct: 664 KGTYKFFTPDMNIQNAKRLVMEAELR-RAVDNQELMLHYQPKVD--AESRQIVGMEALVR 720 Query: 897 W-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV--ASKGISISLPLSVAG 953 W +I F + L L V Q + + +++ LS Sbjct: 721 WVHPTRGVIPPGEFIPLAEETGLIVPLGELVLTRACAQVKQWWDMGLPQVQVAVNLSPRQ 780 Query: 954 LSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRLAGCRIVLSQVG 1009 L+ + E L + P L L I + E+V+KL+ G RI + G Sbjct: 781 FQEPNLIEKVSEILRKTGFPATGLELEITESIAMHDVDNTIETVKKLKDLGVRISIDDFG 840 Query: 1010 RDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPL 1069 + LK L +D ++ G+ +I+ I A+ + + +A V Sbjct: 841 TGYSSLSYLKKFPLHALKIDQSFVRDLGGDDDGASIISSIISMAKAMALGVVAEGVETAQ 900 Query: 1070 VMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 M+ L G + G ++ P + Sbjct: 901 QMEFLRGQECQQVQGFFLSKPLPPSDFL 928 Score = 89.2 bits (220), Expect = 9e-16, Method: Composition-based stats. Identities = 69/436 (15%), Positives = 147/436 (33%), Gaps = 54/436 (12%) Query: 165 IGALALVPLGLLFKPHYLLRHRNPRLLFESLLTLA-------ITLTLSWLSMLYLPWPFT 217 + A ++ + L+ N + +L TL + L W S LP+ Sbjct: 78 LCAGLVLSIPLMALHTAPGSDENVVIWLYALATLLGGGVSAGMLLGEQWHSQPRLPYAAL 137 Query: 218 FIIVLLM-WS-------------------AVRLPRMEAFLIFLTTVMMVS---------- 247 I + LM W+ AV + + A L ++S Sbjct: 138 LIALGLMGWAMFFPEHIPDMGQWSQLSDLAVGMNLIGALGFVLAWFALISGHVVSGRRAP 197 Query: 248 LMMAADPSLLATPRTYLMSHMPWLP------FLLILLPANIMTMVMYAFRAERKHISESE 301 L++ L+A+ + W FL + A +++ + + + + E++ Sbjct: 198 LLLGNFSLLMASAAIIFLLADTWDSRWWFYHFLRLAALALLLSYFFALYLKDFRVLREND 257 Query: 302 THFRNAMEYSAIGMAL--VGTEGQWLQTNKALCQFLGYSQEELR--GLTFQQLTWPEDLN 357 F+ +E G+ V E + + + + Q G S ++ + G++ + L PED Sbjct: 258 ARFQALVESIHAGVYRTQVTLERRLVYASAQMHQVAGLSMQQCQEGGVSLKSLVVPEDWP 317 Query: 358 KDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINEL 417 + +E I + Y M+ R + +W +++ G P +F + +I+E Sbjct: 318 HVQEALEWSIKTHVP-YEMQYRINHPQRGEMWVSDRGRIIKDHQGQPCWFDGALLNIHE- 375 Query: 418 KRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYE 477 + +Q + + I K I + + H Sbjct: 376 ---ARETEQQLLLAKQVVQTASEAIVITNHKNQIMDVNPAYERITGFMRHEVLGRNPKIT 432 Query: 478 CVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA-NRVLNKEGEVERLLGI 536 D + L + E ++G + LA + + N++G + +G+ Sbjct: 433 QSGRHD-ASFYATMWKHLVGEGHWSGEIWDRRRNGEIFPKWLAISAIRNRQGVISHFVGV 491 Query: 537 NMDMTEVKQLNEALFQ 552 D++ K + L + Sbjct: 492 FNDISRQKSTEQQLER 507 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 67/172 (38%), Gaps = 5/172 (2%) Query: 295 KHISESETHF---RNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 E+E + ++ ++ + + + Q + N A + G+ + E+ G + Sbjct: 374 HEARETEQQLLLAKQVVQTASEAIVITNHKNQIMDVNPAYERITGFMRHEVLGRNPKITQ 433 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 + K + GE + +S E RNG++ LA+S +R+ G +F+ Sbjct: 434 SGRHDASFYATMWKHLVGEGH-WSGEIWDRRRNGEIFPKWLAISAIRNRQGVISHFVGVF 492 Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKP-NIFSWDKRMFELY 462 DI+ K TEQ ++L+ L + + + + ++ L Sbjct: 493 NDISRQKSTEQQLERLVFYDPLTQLPNRVLFRDRLIHEVGVAERSNKLMSLL 544 >UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KEH4_CYAP7 Length = 1027 Score = 660 bits (1702), Expect = 0.0, Method: Composition-based stats. Identities = 160/794 (20%), Positives = 316/794 (39%), Gaps = 44/794 (5%) Query: 305 RNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVE 364 + + + + +G L Q L + EE+ G + Q+ +PE + L + Sbjct: 254 QALFDAFPDILFRINDQGIILDYKLQEQQLLSTAPEEVIGKSIQE-VFPEPIGNQLYEGI 312 Query: 365 KLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVN 424 + + S+E + + V L IA I DI+ K TE Sbjct: 313 QQVLLTRQPLSLEYSLNIEDKKRFFEARIVQL------NQTEIIAVIRDISARKHTELAL 366 Query: 425 QQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDR 484 ++ ER++ G+ + + + + L+ P + + Sbjct: 367 RESEERLSTIISTNPNGLLILDREGKVLFVNPAAEILFGRPKKDLMGQILGLPII----- 421 Query: 485 QHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVK 544 + + S ++ + + R ++L +E E L +D+T++K Sbjct: 422 ----------VNNYSEIEI---LQPTGKMVIARIRQVKILWEEKEA--FLASLVDVTDLK 466 Query: 545 QLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVL 604 + L + L + +V+ D I ++N EK++G+T++E +G + Sbjct: 467 GAQKQL----KILKQATEQSPVSVIITDAEGHIEYVNRKFEKLTGYTRQEVIGKNPRLLK 522 Query: 605 HITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLV 664 + + ++ TS + ++G + SI+P+ +G + + Sbjct: 523 SGKISQDQ--YKQLWRTLTSGQEWHGEFHNQKKNGELFWESASISPIKNEEGVITHFIAI 580 Query: 665 IQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRF 724 +D+T + R L+Y A++DALT L NR +L++ + QR A++FIDLDRF Sbjct: 581 KEDITRRKAQDRILAYQANYDALTGLPNRFLAIDRLKLAILQAERQEQRVAVMFIDLDRF 640 Query: 725 KAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARFIATR 783 K VND+ GH GD LL+++A + LR SD +ARLGGDEF +++P+ + IA + Sbjct: 641 KNVNDTLGHEYGDLLLKQVAERLKKCLRKSDTVARLGGDEFLIIIPNLKQPSHCKGIAKK 700 Query: 784 IISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVY 843 I+S++ + E + AS GITL D+ +M AD A Y K GGR Y Sbjct: 701 ILSSLEKPFNLLEEEAF-ISASIGITLYPDDGDDVNALMRNADTAMYLGKRGGRNDFKFY 759 Query: 844 EPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGE 902 + R + + + +K+ ++ ++ + + + + +L W + + Sbjct: 760 TLGMNETNRTRIIIE-NLLHQALKKKEIYLVYQPIMELKTE--KVIGAEALLRWNNPQLG 816 Query: 903 IIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK-GISISLPLSVAGLSSATLVN 961 + F + L + L V + Q+ + A IS+++ LS + L+ Sbjct: 817 QVSPDQFIPIAEETGLINQLGAWVISQACQEVVQWKAQGTPISVAVNLSPRQFRDSKLLK 876 Query: 962 DLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNS 1017 + + + + + L L I + +L+ + + +L + + G + Sbjct: 877 IITDAIAVNGITNHDLELEITEKLLLEDSPGSQGILSQLHQMNFPLSIDDFGTGYSALSY 936 Query: 1018 LKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGI 1077 L + L +D ++ + L+ I + L ++ IA V +++L Sbjct: 937 LIKFPFNRLKIDRSFITDMTHSQKAMGLVKTIIAMSHGLNLQVIAEGVETSEQLNSLKSQ 996 Query: 1078 GVDLIYGEVIADAQ 1091 G D G + Sbjct: 997 GCDYAQGYFFSRPL 1010 Score = 88.8 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 59/140 (42%), Gaps = 1/140 (0%) Query: 295 KHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPE 354 K + + A E S + + + EG N+ + GY+++E+ G + L + Sbjct: 466 KGAQKQLKILKQATEQSPVSVIITDAEGHIEYVNRKFEKLTGYTRQEVIGKNPRLLKSGK 525 Query: 355 DLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDI 414 +Q+ + ++ + E +NG++ W ++S +++ +G +FIA EDI Sbjct: 526 ISQDQYKQLWRTLTS-GQEWHGEFHNQKKNGELFWESASISPIKNEEGVITHFIAIKEDI 584 Query: 415 NELKRTEQVNQQLMERITLA 434 K +++ L Sbjct: 585 TRRKAQDRILAYQANYDALT 604 Score = 75.7 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 96/265 (36%), Gaps = 31/265 (11%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + A + + ESE + + G+ ++ EG+ L N A G +++L G Sbjct: 356 ISARKHTELALRESEERLSTIISTNPNGLLILDREGKVLFVNPAAEILFGRPKKDLMGQI 415 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 +N YS E G + + + V+ Sbjct: 416 LGLPII------------------VNNYS-EIEILQPTGKM--VIARIRQVKILWEEKEA 454 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP 466 F+A + D+ +LK ++ + + A E + + + + +I +++ +L Sbjct: 455 FLASLVDVTDLKGAQKQLKI----LKQATEQSPVSVIITDAEGHIEYVNRKFEKLTGYTR 510 Query: 467 H--IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIR-ALANRV 523 I N ++ + +D+ K + +L S + EF K+G A + + Sbjct: 511 QEVIGKNPRLLKSGKISQDQY---KQLWRTLTSGQEWHGEFHNQKKNGELFWESASISPI 567 Query: 524 LNKEGEVERLLGINMDMTEVKQLNE 548 N+EG + + I D+T K + Sbjct: 568 KNEEGVITHFIAIKEDITRRKAQDR 592 Score = 69.1 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 80/227 (35%), Gaps = 17/227 (7%) Query: 461 LYEIPPHIKPNWQVWYECVL--PEDRQH----AEKVIRDSLQSRSPFKLEFRITVKDGIR 514 + + + Q++++ + ED + +LQ ++ ++++ + + R Sbjct: 150 INHLALEQEKKRQIYHQKIDLINEDIEEITDKVLSQWIVALQIQTSLQIKYGNSPSNKKR 209 Query: 515 HIRALANRVLNKE--GEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCID 572 IR L + KE G+ L DMTE K E + + D+ + + I+ Sbjct: 210 -IRRLNQSITEKELSGKSIGYLNNLTDMTEQKNAEEVTTHINQEIQALFDAFPDILFRIN 268 Query: 573 MAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDV 632 I +++ EE +G + V G L E I +R + + Sbjct: 269 DQGIILDYKLQEQQLLSTAPEEVIGKSIQEVFPEPIG--NQLYEGIQQVLLTRQPLSLEY 326 Query: 633 VLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLS 679 L+ + I L + + VI+D++ + L Sbjct: 327 SLNIEDKKRF-FEARIVQL-----NQTEIIAVIRDISARKHTELALR 367 >UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=12 Tax=Bacteria RepID=A0L2H7_SHESA Length = 1228 Score = 658 bits (1699), Expect = 0.0, Method: Composition-based stats. Identities = 143/701 (20%), Positives = 279/701 (39%), Gaps = 31/701 (4%) Query: 409 AQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSW-DKRMFELYEIPPH 467 A ++I + + + +R + +G L+ F ++ E+ Sbjct: 536 ALSKEIARSQTFQATLMESEQRYRTLFDKAPVGHALKRLEDGQFVAINQAFMEITGYTLE 595 Query: 468 IKPNWQVW------YECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALAN 521 W Y+ E + ++ R P++ +R + +R + Sbjct: 596 ELQAIDPWELTPIRYQSSETEQLERLKQTRR-----YGPYQKHYRHK-DGQLVAVRLNGS 649 Query: 522 RVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMN 581 V GE + +L I D+TE E L GE + +D I +N Sbjct: 650 LVTAANGE-QLILFIVEDITE----QERTVARVNLLAQVFQQSGEGITIMDANDIIVDVN 704 Query: 582 PVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGS 641 +++G++++E +G + + + + +A + +V + G Sbjct: 705 SAFTQITGYSRDEIIGKNCRFL--EAERTDRSIDAQVRAALEQTGFWQGEVWDRHKEGFD 762 Query: 642 YDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLR 701 + ++ + G+ + D++E + ++ + A HD+LT L NR S + +L Sbjct: 763 FPKWLMMSIVRDETGAISHYIGSFTDISERKVNEERIHFLAHHDSLTLLPNRLSLQSRLE 822 Query: 702 ILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLG 761 + Q + + A++FID+D FK +ND+ GH GD LL E+A + +++ + D++ARLG Sbjct: 823 KVFQEAFISQTQIAVMFIDMDHFKNINDTLGHHVGDMLLLEVARRLKNIMGNDDIVARLG 882 Query: 762 GDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEV 821 GDEF ++L D + + +A + S +N ++ + + S GI+L + + Sbjct: 883 GDEFVVVLSDTDHDRVAKVAEALRSGLNQT-YLIDNKPLHSSPSIGISLFPTDGDSVEAL 941 Query: 822 MSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASP 881 M AD+A Y +K GR + +ER + + + I N+L++ Sbjct: 942 MKNADMAMYRAKAAGRNNYQFFTAAMNTLVTERQQIETGLR-QAIACNELLLYYQPQVD- 999 Query: 882 RIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV-- 938 I + + + +L W E ++ F + + + + V Q A+ Sbjct: 1000 -ISSGQVVGVEALIRWQHPELGLVAPDRFIPIAEEIDMIIPIGQWVLENALAQLAEWRDK 1058 Query: 939 ASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQ 994 +KG+ +++ LS L T+V D++ L L L L I + + E + Sbjct: 1059 GAKGLRMAVNLSAHQLRKDTIVADIINVLTKHKLGKGALELEITESVAMQYPEQNAKLLA 1118 Query: 995 KLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQ 1054 +LR G + + G + LK D L LD +++ + D + A Sbjct: 1119 ELRQHGIELAIDDFGTGYSSLSYLKLLPLDRLKLDRSFVKDIESDPNDAAISAATISMAH 1178 Query: 1055 RLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDL 1095 LG+ +A V + LSG+G DL+ G + D Sbjct: 1179 ELGLTVVAEGVENEAQLVLLSGMGCDLVQGYYFSKPLAADD 1219 Score = 124 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 57/282 (20%), Positives = 114/282 (40%), Gaps = 9/282 (3%) Query: 282 IMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGT-EGQWLQTNKALCQFLGYSQE 340 ++ + + + + ESE +R + + +G AL +GQ++ N+A + GY+ E Sbjct: 536 ALSKEIARSQTFQATLMESEQRYRTLFDKAPVGHALKRLEDGQFVAINQAFMEITGYTLE 595 Query: 341 ELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHT 400 EL+ + +LT + + +Q+E+L +K Y +++G +V L SLV Sbjct: 596 ELQAIDPWELTPIRYQSSETEQLERL-KQTRRYGPYQKHYRHKDGQLVAVRLNGSLVTAA 654 Query: 401 DGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFE 460 +G L +EDI E +RT + + + G GI + I + + Sbjct: 655 NGEQLILF-IVEDITEQERTVAR----VNLLAQVFQQSGEGITIMDANDIIVDVNSAFTQ 709 Query: 461 LYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRH-IRAL 519 + + DR + +R +L+ ++ E K+G + Sbjct: 710 ITGYSRDEIIGKNCRFLEAERTDRS-IDAQVRAALEQTGFWQGEVWDRHKEGFDFPKWLM 768 Query: 520 ANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITL 561 + V ++ G + +G D++E K E + +TL Sbjct: 769 MSIVRDETGAISHYIGSFTDISERKVNEERIHFLAHHDSLTL 810 Score = 68.0 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 42/205 (20%), Positives = 80/205 (39%), Gaps = 9/205 (4%) Query: 11 ALPHPLLHLVSLGLVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRHAGRM-WPGIA 69 A H L + + L F+ L ++ A +W I + + W G+ Sbjct: 24 AFAHYLKVNILVALAYFVVGKIGLLIALPPGYSAAIWPAAGIAIASCIMWRQYAPWFGVL 83 Query: 70 LSCSLGNIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLP---WYNPLQNLADWLR 126 L L NI L L + + + ++A V A ++R++ P P + L Sbjct: 84 LGSWLININIGGAL-HLGWLPIAIASASSLQAYVSAKVIRRIDPVFTLDKPNTVIKSCLS 142 Query: 127 LALGSAIVPPLLG--GVLVVLLTPGDDPLRAFLIWVLSESIGALALVPLGLLFKPHYLL- 183 LAL + ++ L ++V P D L + + W + + +GA+ +PL +L + Sbjct: 143 LAL-TCMIATLFANAALVVHGTIPLKDALGSTVNWWIGDLLGAVIFIPLTMLIFDQRSIW 201 Query: 184 RHRNPRLLFESLLTLAITLTLSWLS 208 R R + L+ + + + S Sbjct: 202 RSRRVQTGLPLLVGFLFCVGIYYYS 226 >UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAD3_METSD Length = 751 Score = 658 bits (1699), Expect = 0.0, Method: Composition-based stats. Identities = 163/581 (28%), Positives = 262/581 (45%), Gaps = 19/581 (3%) Query: 529 EVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMS 588 E+ RLL + +D+ ++ + L+ EK+R +TL SIG+ V+ D ++ ++NPVAE+M+ Sbjct: 168 EINRLLKLEIDL--RREAEQTLYAEKQRAVVTLQSIGDGVITTDKQSRVNYLNPVAERMT 225 Query: 589 GWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQ---DVVLHCRSGGSYDVH 645 GW+ EA G PLL V I + L+ N I L R G Y + Sbjct: 226 GWSNAEAQGKPLLEVFRIVNESSRKLVPNPVDVVLQHGEIYGLANHTALIGRHGNEYAIE 285 Query: 646 YSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQ 705 S P+ DG+ +G VLV DV+E+R M +++Y A HD LT L NR +L L Sbjct: 286 DSAAPIRDQDGNVLGVVLVFHDVSEARNMANKMTYLAEHDYLTGLPNRLLLNDRLNQALT 345 Query: 706 TVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEF 765 + AL+F+DLD FK +NDS GH GD LL+ +A + S LR+SD ++R GGDEF Sbjct: 346 IARRDQEFIALMFLDLDHFKNINDSLGHEVGDQLLKMVARRLESCLRASDTISRQGGDEF 405 Query: 766 GLLLPD-CNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQ 824 +LLP+ N S +A ++++A + V AS GI + D+ + Sbjct: 406 MILLPELTNYFSPAEVAEKLLAA-ATVPYEIGSHEITVSASIGIAVFPDDGENGELLTKN 464 Query: 825 ADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIP 884 AD A Y +K+ GR + E A + + R ++ N+ ++ R Sbjct: 465 ADAAMYHAKSLGRNNYQFFTRAMNERVMEIAELE-SKLRRAVERNEFVLYYQPKIDIR-- 521 Query: 885 EARNLWLISLKLWSCEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS--K 941 + + +L W ++ F D L + V E +Q + A+ Sbjct: 522 TGQVVGAEALIRWQHPSWGLVAPDRFIPIAEDSGLIRPIGLWVMREACRQNQEWQAAGLA 581 Query: 942 GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES-----VQKL 996 I +++ LS L + ++ E L S L P L L + + HAE+ + KL Sbjct: 582 RIPVAVNLSTVQLRQHNFLQEVSEILLMSGLEPDYLELEVTESVAI-HAETEVINWLHKL 640 Query: 997 RLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRL 1056 R G ++ L G + LK + + +D +++ + D +IT I + L Sbjct: 641 RSMGVKLALDDFGTGYSSLSYLKRLPINNVKIDKSFIRDIETDPDDATIITAIIRMSHGL 700 Query: 1057 GMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 + IA V ++ L G D + G + + P D Sbjct: 701 RLNVIAEGVENINQLEFLKKEGCDQMQGFIASRPVPADEFA 741 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 22/158 (13%), Positives = 52/158 (32%), Gaps = 4/158 (2%) Query: 281 NIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQE 340 ++ + + R + + + ++ G+ + + N + G+S Sbjct: 171 RLLKLEIDLRREAEQTLYAEKQRAVVTLQSIGDGVITTDKQSRVNYLNPVAERMTGWSNA 230 Query: 341 ELRGLTFQQ---LTWPEDLNKDLQQVEKLIS-GEINTYSMEKRYYNRNGDVVWALLAVSL 396 E +G + + V+ ++ GEI + R+G+ + + Sbjct: 231 EAQGKPLLEVFRIVNESSRKLVPNPVDVVLQHGEIYGLANHTALIGRHGNEYAIEDSAAP 290 Query: 397 VRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLA 434 +R DG L + D++E + L E L Sbjct: 291 IRDQDGNVLGVVLVFHDVSEARNMANKMTYLAEHDYLT 328 >UniRef50_A6WTB4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=20 Tax=Shewanella RepID=A6WTB4_SHEB8 Length = 1497 Score = 658 bits (1699), Expect = 0.0, Method: Composition-based stats. Identities = 160/692 (23%), Positives = 280/692 (40%), Gaps = 25/692 (3%) Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPN 471 IN K+ Q + +R+ + +WEW F D R L I + Sbjct: 799 RQINTFKQMNQALTESDDRLRQSLRGSDSDLWEWHKNTQAFHLDNRGAVLGTHANEIVVS 858 Query: 472 WQVWYECVLPEDRQHAEKVIRDSLQSR-SPFKLEFRITVKDGIR-HIRALANRVLNKE-- 527 V P+DR+ A + F+ E+R KDG +R V + Sbjct: 859 LAEL--PVHPQDREKALAQWDSMISGEIDRFEAEYRYQRKDGNWGWLRVRGRPVARNKHS 916 Query: 528 GEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKM 587 E+ER+ GI D+T +QL + + L + E V+ +D+ I N A+++ Sbjct: 917 NEIERVAGIYSDITVQRQLEDEVN----LLAKAFGNTSEGVLILDVEGSIRVANYAAQQI 972 Query: 588 SGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYS 647 G + +G + + G L I + + + L S V + Sbjct: 973 IGIDSTDLVGQSFTQFVQMNDG----LASEIKQLLSDSQSWTGERELINASQQPCPVWLN 1028 Query: 648 ITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTV 707 ++ + + +G V+V D+TE ++ L A++D LT L NR+ F +L +Q Sbjct: 1029 VSVMQSANGKVTHYVVVFSDITERKQTEADLRRLANYDVLTGLPNRSLFSSRLLQSIQAA 1088 Query: 708 NSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGL 767 T ++ AL+F+DLDRFK VNDS GH+ GDALL E +S + S + S +L R GGDEF + Sbjct: 1089 QQTGEKLALLFLDLDRFKHVNDSYGHSMGDALLVEASSRLQSCIASEHMLCRFGGDEFVI 1148 Query: 768 LLPDCN-VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQAD 826 LL + N ++ IA R++ + F GR + S GI++ D+ Q + AD Sbjct: 1149 LLRNANSIDDINHIAERLLEQIVA-PFKLYGREFYISTSIGISIWPDDAVQPEAFIKNAD 1207 Query: 827 IACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEA 886 +A Y +K GRG Y ++ A + D + + I+ + + + Sbjct: 1208 LAMYHAKEEGRGNFQYYSSERNAQALYHLRLEADLR-KAIERQEFELYYQPQIDI-LRND 1265 Query: 887 RNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKG--I 943 + + + +L W I F + L +DR V + Q A G Sbjct: 1266 KLIGMEALIRWKHPLDGFIRPDIFIKVAEACGLIVDIDRWVLRQACVQGAHWAKRYGSTF 1325 Query: 944 SISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRLA 999 +S+ +S + D+ L + +P L L I ++ + + +L+ Sbjct: 1326 KLSVNISAVHFRQPDFIEDIQSILHETQMPTASLGLEITEGVLMKELHVAKDHLSRLKSL 1385 Query: 1000 GCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMK 1059 G + + G L+ + L +D ++ N D+ +++ I A+ L + Sbjct: 1386 GIEVAIDDFGTGYSSLAYLRHFEVNTLKIDRSFLIDIATNKADQAIVSSIIELARNLKLN 1445 Query: 1060 TIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQ 1091 +A + ++ + G +I G A Sbjct: 1446 VVAEGIETVEQLEQVFSRGCYIIQGYYFAKPM 1477 Score = 79.9 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 58/348 (16%), Positives = 116/348 (33%), Gaps = 40/348 (11%) Query: 226 SAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLAT-PRTYLMSHMPWLPFLLILLPANIMT 284 S + L + + L + V+ + + P + + LL+L ++ Sbjct: 733 SQINLAGLASGGYVLDILSQVNGIWSDKPFTYPFYVEQHWWLSQGFKGILLLLFSIIALS 792 Query: 285 MVMYAFRA------ERKHISESETHFRNAMEYSAIGMA---------LVGTEGQWL--QT 327 + Y R + ++ES+ R ++ S + + G L Sbjct: 793 LAWYRQRQINTFKQMNQALTESDDRLRQSLRGSDSDLWEWHKNTQAFHLDNRGAVLGTHA 852 Query: 328 NKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDV 387 N+ + S EL P+D K L Q + +ISGEI+ + E RY ++G+ Sbjct: 853 NEIVV-----SLAELP-------VHPQDREKALAQWDSMISGEIDRFEAEYRYQRKDGNW 900 Query: 388 VWALLAVSLVRHT--DGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEW 445 W + V DI ++ E L + +E G+ Sbjct: 901 GWLRVRGRPVARNKHSNEIERVAGIYSDITVQRQLEDEVNLLAKAFGNTSE----GVLIL 956 Query: 446 ELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEF 505 +++ +I + ++ I Q + + V D I+ L + E Sbjct: 957 DVEGSIRVANYAAQQIIGIDSTDLVG-QSFTQFVQMND--GLASEIKQLLSDSQSWTGER 1013 Query: 506 RITVKDGIRH-IRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQ 552 + + + + + G+V + + D+TE KQ L + Sbjct: 1014 ELINASQQPCPVWLNVSVMQSANGKVTHYVVVFSDITERKQTEADLRR 1061 >UniRef50_Q3J1Y6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Rhodobacter sphaeroides RepID=Q3J1Y6_RHOS4 Length = 833 Score = 658 bits (1698), Expect = 0.0, Method: Composition-based stats. Identities = 190/803 (23%), Positives = 325/803 (40%), Gaps = 34/803 (4%) Query: 306 NAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEK 365 + A + + +GQ + N+A C LG + L G +L + + Sbjct: 25 AFFDGVAHPVLIKNAQGQVIFANRAACDLLGRDRSGLAGGAEHELVAGTQAEQIASFDAE 84 Query: 366 LISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQ 425 + + S E+ G + + R G + + +I +L+ TE V + Sbjct: 85 AMR--RGSVSAEQEMPGPRGVRRFL-----VSRRPAGE--HLVVTFFEITDLRETEGVLR 135 Query: 426 QLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQ 485 Q + E + + + + R+ + +P + + W+ + P DR+ Sbjct: 136 QREAHLRNLLELHPVAPFSFTADGVLSDLSDRLVAITGLPAGTR-HVDAWWAAMHPCDRR 194 Query: 486 HAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRAL-ANRVLNKEGEVERLLGINMDMTEV 543 + S++ F E R+ + DG R RA R +++ V+R GI D+ E Sbjct: 195 DLRRAWIRSVRGGQSFDAEHRLQMPDGAYRWFRARIVARPRDQDQRVDRWFGIIEDVHER 254 Query: 544 KQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTV 603 + E L + + R D + D + F++ +G + +EALG + Sbjct: 255 RTTVEQLRESEARFRAFADDAPVMIWVTDTEGRNVFVSRSWLGATGQSLDEALGTGWIDA 314 Query: 604 LHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVL 663 +H D + A R A + + + GG V P DG+ IG + Sbjct: 315 VHPDDRDATAAITR--EAMRRRIAYTNEFRIRRKDGGWCWVIDVGHPRLLADGTFIGYIG 372 Query: 664 VIQDVTESRKMLR-------QLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHAL 716 D++ R+ Q+ + A HD LT L NR F + + ++ + A+ Sbjct: 373 CCVDISARRQAEDDRVMAQLQVFHMARHDMLTGLPNRHYFGDCYQEAVASLAPE-RSVAV 431 Query: 717 VFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLL-LPDCNVE 775 + +DLD FK VND+ GH GD +L E+A+ + + +RS+D +ARLGGDEF ++ P + + Sbjct: 432 LMLDLDGFKTVNDTRGHPVGDQVLCEVANRLRTSVRSTDTVARLGGDEFAVIQTPIRSEQ 491 Query: 776 SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNG 835 A +A R+I+A++ F EG V VGAS GI + A E+M AD+A YA+K Sbjct: 492 EACDLARRLIAAISK-PFDLEGAVPEVGASVGIAFARGHGDSAEEIMRYADVALYAAKQA 550 Query: 836 GRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLK 895 GRG V++ R M + + +L + + R + + +L Sbjct: 551 GRGTFRVFDEATDTHLQSRQKMKAALR-AALGLGELSVFYQPLIGLR--DGQVTACEALM 607 Query: 896 LWSCEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAGL 954 W +G I F + L + V HE QAA+ S +S+++ LS Sbjct: 608 RWHRKGAGWITPDQFIPLAEEAGLIGDMGDWVLHEACAQAARWPDS--VSVAVNLSPLQF 665 Query: 955 SSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGR 1010 LV+ + L S LPP L L I +LD + +Q LR G +IV+ G Sbjct: 666 HGGALVDQVASALRASGLPPERLQLEITESVLLDPTDRNIGVLQDLRALGAKIVMDDFGT 725 Query: 1011 DLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLV 1070 L++ D + +D ++ ++ + G + L M+T V Sbjct: 726 GYSSLGYLRSFPFDKIKVDRSFIRDLPDAREALAILKAVAGLGRSLDMRTTVEGVETQAQ 785 Query: 1071 MDTLSGIGVDLIYGEVIADAQPL 1093 +D GVD G + P Sbjct: 786 LDCAIAEGVDEAQGYFFSRPLPA 808 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 94/279 (33%), Gaps = 4/279 (1%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + R + + E H RN +E + +G + L G Sbjct: 124 ITDLRETEGVLRQREAHLRNLLELHPVAPFSFTADGVLSDLSDRLVAITGLPAGTRHVDA 183 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLA-VSLVRHTDGTPL 405 + P D + + + G ++ E R +G W V+ R D Sbjct: 184 WWAAMHPCDRRDLRRAWIRSVRG-GQSFDAEHRLQMPDGAYRWFRARIVARPRDQDQRVD 242 Query: 406 YFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIP 465 + IED++E + T + ++ R + + IW + + + Sbjct: 243 RWFGIIEDVHERRTTVEQLRESEARFRAFADDAPVMIWVTDTEGRNVFVSRSWLGATGQS 302 Query: 466 PHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIR-HIRALANRVL 524 W + V P+DR + R++++ R + EFRI KDG + + + L Sbjct: 303 LDEALGT-GWIDAVHPDDRDATAAITREAMRRRIAYTNEFRIRRKDGGWCWVIDVGHPRL 361 Query: 525 NKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDS 563 +G +G +D++ +Q + + ++ Sbjct: 362 LADGTFIGYIGCCVDISARRQAEDDRVMAQLQVFHMARH 400 >UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A628_PELCD Length = 1063 Score = 658 bits (1698), Expect = 0.0, Method: Composition-based stats. Identities = 154/695 (22%), Positives = 280/695 (40%), Gaps = 26/695 (3%) Query: 413 DINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNW 472 I K+T Q +Q + E+ I + NI + +L+ + + Sbjct: 368 MIMRYKKTLQALRQSEGTLKAMLESIADPIHMVDRDLNILWANDIAKQLFGKNLVGQKCY 427 Query: 473 QVWYECVLPEDR-QHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRV-LNKEGEV 530 + P D HA K D S + D R AN + +G+ Sbjct: 428 AALHRSPTPCDPMCHAIKAFSDGHAHSSE---NLFFDINDEERCFLVTANVASTDSQGQP 484 Query: 531 ERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGW 590 +L I+ D+TE+K+ + Q K ++D+ ++ D+ ++T+ N A + G+ Sbjct: 485 SAVLTISRDVTEIKKTQQQFHQAK----WSIDASLTPMLMADLQGRLTYANQAALDLWGY 540 Query: 591 -TQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSIT 649 +EE LG + + F ++ I +R + ++G +DV Sbjct: 541 AGEEEVLGKNI-----VEFQEDPQRTRIIMEILKARGVWRGEGRGKQKNGNGFDVELQAQ 595 Query: 650 PLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNS 709 + +G + + D+T+ RK Q+ A D+LT L NR + + + L Sbjct: 596 VVKDQNGGPLSILASAIDITDKRKTELQIKKLAYFDSLTGLPNRTLLKDHMELALGQARR 655 Query: 710 THQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLL 769 ++ A++ +DLD FK +ND+ GHA GD L+R +A + + R+ D LAR GGDEF LLL Sbjct: 656 LNKFVAVLLLDLDNFKHINDTLGHATGDLLIRSVAERLRTECRTCDTLARWGGDEFVLLL 715 Query: 770 PDCN-VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIA 828 D + +++ + ++ + + F AS GI L + ++ +AD A Sbjct: 716 TDLDDIQNTTSATEKFMALLTERPFATSECDINTTASIGIALYPQDGQDPETLLKRADTA 775 Query: 829 CYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARN 888 Y +K GR + Q A R M ++ + +KE ++ ++ + + R Sbjct: 776 MYEAKKNGRNGYHFFSLQLAEQAERRHRMEINLR-SALKEGEMQLVYQPQID--LGKVRI 832 Query: 889 LWLISLKLWS-CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK--GISI 945 + +L W E I F + L + L V + +Q A ++ + + Sbjct: 833 TGMEALLRWQSPEEGTISPARFIPLAEETGLIYPLGEWVLQQACRQGAIWQKTEASPLCV 892 Query: 946 SLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGC 1001 ++ LS L ++ + L + L P LL L I L++ E+ + +L+ G Sbjct: 893 AVNLSAKQFHQPDLAKNIKKILRETGLSPHLLELEITESVFLENMEAAIEALTELKKLGV 952 Query: 1002 RIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTI 1061 + + G + LK D + + E ++ + D+ +I A+ LGMK I Sbjct: 953 QFSIDDFGTGYSSLSYLKKLPIDRIKIAQEFVRDIDTDDGDKAIIKATIAMAKSLGMKLI 1012 Query: 1062 AGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 A V + L G + G A P + Sbjct: 1013 AEGVENHQQLAFLLLHGCHAMQGYYFAKPMPAQEV 1047 Score = 77.2 bits (189), Expect = 4e-12, Method: Composition-based stats. Identities = 48/299 (16%), Positives = 112/299 (37%), Gaps = 15/299 (5%) Query: 259 TPRTYLMSHMPWLPFLLI---LLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGM 315 + + L+ L + +T+++ ++ + + +SE + +E A + Sbjct: 338 SSELSAHKRQVTIALLIAGVFLCLSCTLTLMIMRYKKTLQALRQSEGTLKAMLESIADPI 397 Query: 316 ALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYS 375 +V + L N Q G + L G D + + +S Sbjct: 398 HMVDRDLNILWANDIAKQLFG---KNLVGQKCYAALHRSPTPCDPMCHAIKAFSDGHAHS 454 Query: 376 MEKRYYNRNGDVVWALLAVSL-VRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLA 434 E +++ N + L+ ++ + G P + D+ E+K+T+Q Q I Sbjct: 455 SENLFFDINDEERCFLVTANVASTDSQGQPSAVLTISRDVTEIKKTQQQFHQAKWSI--- 511 Query: 435 NEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDS 494 +A + +L+ + ++ +L+ + + E ED Q +I + Sbjct: 512 -DASLTPMLMADLQGRLTYANQAALDLWGYAGEEEVLGKNIVEF--QEDPQRTR-IIMEI 567 Query: 495 LQSRSPFKLEFRITVKDGIRH-IRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQ 552 L++R ++ E R K+G + A V ++ G +L +D+T+ ++ + + Sbjct: 568 LKARGVWRGEGRGKQKNGNGFDVELQAQVVKDQNGGPLSILASAIDITDKRKTELQIKK 626 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 64/152 (42%), Gaps = 8/152 (5%) Query: 287 MYAFRAERKHISESETHFRNA---MEYSAIGMALVGTEGQWLQTNKALCQFLGYS-QEEL 342 + + I +++ F A ++ S M + +G+ N+A GY+ +EE+ Sbjct: 487 VLTISRDVTEIKKTQQQFHQAKWSIDASLTPMLMADLQGRLTYANQAALDLWGYAGEEEV 546 Query: 343 RGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDG 402 G + ED + +E L + + E R +NG+ L +V+ +G Sbjct: 547 LGKNIVEFQ--EDPQRTRIIMEILKA--RGVWRGEGRGKQKNGNGFDVELQAQVVKDQNG 602 Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLA 434 PL +A DI + ++TE ++L +L Sbjct: 603 GPLSILASAIDITDKRKTELQIKKLAYFDSLT 634 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 25/145 (17%), Positives = 57/145 (39%), Gaps = 3/145 (2%) Query: 536 INMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEA 595 + + + K+ +AL Q + L L+SI + + +D + I + N +A+++ G Sbjct: 365 LTLMIMRYKKTLQALRQSEGTLKAMLESIADPIHMVDRDLNILWANDIAKQLFGKN---L 421 Query: 596 LGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLD 655 +G LH + P+ I + + +++ + + + Sbjct: 422 VGQKCYAALHRSPTPCDPMCHAIKAFSDGHAHSSENLFFDINDEERCFLVTANVASTDSQ 481 Query: 656 GSNIGSVLVIQDVTESRKMLRQLSY 680 G + + +DVTE +K +Q Sbjct: 482 GQPSAVLTISRDVTEIKKTQQQFHQ 506 >UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U882_9DELT Length = 958 Score = 658 bits (1698), Expect = 0.0, Method: Composition-based stats. Identities = 130/576 (22%), Positives = 243/576 (42%), Gaps = 14/576 (2%) Query: 531 ERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGW 590 +RL+ ++ Q ++ E + D + + +NP ++G+ Sbjct: 376 DRLVDFRDELRAEIDERTRAEQRLRLYEKVFENALEGISITDKSGVMVAVNPAFTTITGF 435 Query: 591 TQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITP 650 T EE +G + + +++ +R + ++ ++G SY SI+ Sbjct: 436 TSEEVIGKNPRVLK--SDMHGEEFYGEMWTTLKARGSWHGEIWNRRKNGESYPEILSISS 493 Query: 651 LSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNST 710 + DG V V D+++ + QL++ HD LT L NR +L + L N T Sbjct: 494 IRDDDGEIANYVAVFHDISDMKHKEEQLAHHLYHDGLTGLPNRVLVLDRLSMALSHANRT 553 Query: 711 HQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLP 770 + A++F+DLD FK +NDS GHA GD LL+ +A ++++ R D +AR GGDEF +++ Sbjct: 554 GTKVAVLFLDLDNFKKINDSFGHAQGDTLLKAVAERLVALYRDEDTVARQGGDEFLVVVV 613 Query: 771 DCNVE-SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIAC 829 D + E +A + + F+ +G+ + S G+TL D+ A ++ AD+A Sbjct: 614 DVHEEREVVDLAEGLQRVFEE-PFVIKGQEVFITPSIGVTLYPDDGQDPASLVKNADMAM 672 Query: 830 YASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNL 889 Y SK GR ++ Q + ++R + D + R +KE + + + Sbjct: 673 YQSKAKGRNSYFLFTQQMSERIAQRLTLESDMR-RALKEREFTVYFQPKVD--LASGEVS 729 Query: 890 WLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQ--QAAKAVASKGISIS 946 L +L W +G I+ + F + L L V + Q + V ++++ Sbjct: 730 GLEALVRWVKPDGIIVSPEDFIPMAEETGLIVPLGEFVLDASCKAMQVLQGVGCSALTVA 789 Query: 947 LPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCR 1002 + LS LV ++ LE + LP L L I ++ +S + +L G Sbjct: 790 VNLSPIQFGQEDLVEMVVANLERNGLPASRLELEITESTLMTDVQSSVAQLNRLVELGIT 849 Query: 1003 IVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIA 1062 I + G LK L +D ++ + D ++ + A+ +G+ +A Sbjct: 850 ISIDDFGTGYSSLYYLKNFPISTLKIDRSFIRDITIDDSDAKIVETVVLMARTMGIGVVA 909 Query: 1063 GPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 V +D L+ G + G + PL+ ++ Sbjct: 910 EGVETKEQLDLLATFGCATVQGYYYSRPLPLEKIIE 945 Score = 89.9 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 57/144 (39%), Gaps = 1/144 (0%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + A ER + + E + G+++ G + N A G++ EE+ G Sbjct: 385 LRAEIDERTRAEQRLRLYEKVFENALEGISITDKSGVMVAVNPAFTTITGFTSEEVIGKN 444 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 + L + ++ + ++ E +NG+ +L++S +R DG Sbjct: 445 PRVLKSDMHGEEFYGEMWTTLKAR-GSWHGEIWNRRKNGESYPEILSISSIRDDDGEIAN 503 Query: 407 FIAQIEDINELKRTEQVNQQLMER 430 ++A DI+++K E+ + Sbjct: 504 YVAVFHDISDMKHKEEQLAHHLYH 527 Score = 49.5 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 34/199 (17%), Positives = 76/199 (38%), Gaps = 13/199 (6%) Query: 392 LAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNI 451 L++ R+ D + +I+E R EQ + + E GI + + Sbjct: 367 LSMHFNRYMDRLVDFRDELRAEIDERTRAEQRLRLYEK----VFENALEGISITDKSGVM 422 Query: 452 FSWDKRMFELYEIPPH--IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITV 509 + + + I N +V + E+ + +L++R + E Sbjct: 423 VAVNPAFTTITGFTSEEVIGKNPRVLKSDMHGEE---FYGEMWTTLKARGSWHGEIWNRR 479 Query: 510 KDGIRHIRALA-NRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAV 568 K+G + L+ + + + +GE+ + + D++++K E L H L + V Sbjct: 480 KNGESYPEILSISSIRDDDGEIANYVAVFHDISDMKHKEEQLAHH--LYHDGLTGLPNRV 537 Query: 569 VCID-MAMKITFMNPVAEK 586 + +D ++M ++ N K Sbjct: 538 LVLDRLSMALSHANRTGTK 556 >UniRef50_B6BNY2 Ggdef domain protein n=2 Tax=Campylobacterales bacterium GD 1 RepID=B6BNY2_9PROT Length = 744 Score = 658 bits (1698), Expect = 0.0, Method: Composition-based stats. Identities = 150/697 (21%), Positives = 289/697 (41%), Gaps = 29/697 (4%) Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPN 471 + K ++ ++L ERI LA G+W+W + + + R E+ PN Sbjct: 45 RNRELKKIDKKNIEELHERIELALLGSNDGLWDWNITDDSIYFSPRWKEMLGFKDDELPN 104 Query: 472 -WQVWYECVLPEDRQHAEKVIRDSLQSRSPF-KLEFRITVKDGIRHIRALANRV-LNKEG 528 W + V PED Q A I ++ + + + RI K+G +V L++ G Sbjct: 105 EMPSWQDRVHPEDLQSALDEIEKNINGETDYYENIHRIRHKNGDWIWTLDRGKVQLDENG 164 Query: 529 EVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMS 588 + R++G + D+T ++++ Q+ + ++ I ++V+ D+ IT N ++ + Sbjct: 165 KAVRMIGTHRDITNIQEMQLKYSQQVQ----IIEQIHDSVISTDLNGYITSWNKGSQILL 220 Query: 589 GWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSI 648 +T+EE L + ++ ++ ++ D L +SG V S+ Sbjct: 221 EYTEEEMLTKHVSSLF---LEEDHKALQEGTQELIKHGEYHADKRLVKKSGDIIFVSLSL 277 Query: 649 TPLSTLDGSNIGSVLVIQDVTESRKMLRQL-------SYSASHDALTHLANRASFEKQLR 701 + L G+ V QD+T+ ++ +L Y A HD LT L NR F ++L Sbjct: 278 SILKDEKGNPTALVGYCQDITKRKEAEEKLYEQKNILHYQAHHDELTQLPNRTFFNERLE 337 Query: 702 ILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLG 761 ++ AL +IDLD FK +NDS GH GD +L+ A + + +R D L+RLG Sbjct: 338 QAIEKAKRNKTLIALFYIDLDHFKQINDSLGHEVGDIVLKITAERLKNKIRKEDTLSRLG 397 Query: 762 GDEFGLLLPDCN-VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAE 820 GDEF L++ + N + +A +II + +I + + +S GI++ D++ A Sbjct: 398 GDEFTLIIEELNIAKDVSLLAQKIIEDLEKPIYI-DTHTLYISSSIGISIYPDDDTDAKN 456 Query: 821 VMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVAS 880 ++ AD A Y +K GR Y + E AM + + ++ + ++ Sbjct: 457 LLKYADSAMYKAKEEGRNNFQFYSSEMTELAFEHVAMEASLR-QALQNEEFVVYYQPQMD 515 Query: 881 PRIPEARNLWLISLKLWSCEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVA 939 R R + + +L W+ ++ F L +D+ V Q Sbjct: 516 GRTD--RLVGMEALVRWNHPTLGLVQPYKFIPIAEKNGLIVQIDQWVMKSAMTQFVAWYK 573 Query: 940 S--KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----V 993 +++ L+V L ++ + L+++ P + L + I+ + + + Sbjct: 574 DGLNPGVLAMNLAVKQLQKKDFIDTMSNLLKSTQCKPEWIELEVTESQIMTNPQEAIKIL 633 Query: 994 QKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHA 1053 +++ G + + G + LK D L +D ++ + D + + + Sbjct: 634 KQISEMGIELAVDDFGTGYSSLSYLKRLPIDKLKIDRTFIQDLPDDEEDVGITKSVIALS 693 Query: 1054 QRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADA 1090 + L +K IA V + L G I G + + Sbjct: 694 KSLNLKVIAEGVETDEQKNFLVENGCQNIQGYLYSKP 730 Score = 136 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 61/276 (22%), Positives = 118/276 (42%), Gaps = 9/276 (3%) Query: 291 RAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGL--TFQ 348 + ++K+I E A+ S G+ + + + LG+ +EL ++Q Sbjct: 51 KIDKKNIEELHERIELALLGSNDGLWDWNITDDSIYFSPRWKEMLGFKDDELPNEMPSWQ 110 Query: 349 QLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFI 408 PEDL L ++EK I+GE + Y R ++NGD +W L + +G + I Sbjct: 111 DRVHPEDLQSALDEIEKNINGETDYYENIHRIRHKNGDWIWTLDRGKVQLDENGKAVRMI 170 Query: 409 AQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHI 468 DI ++ + Q ++ I +++ + +L I SW+K L E Sbjct: 171 GTHRDITNIQEMQLKYSQQVQIIEQIHDS----VISTDLNGYITSWNKGSQILLEYTEEE 226 Query: 469 KPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVL-NKE 527 V L ED + ++ ++ ++ + + R+ K G +L+ +L +++ Sbjct: 227 MLTKHV-SSLFLEEDHKALQEGTQELIKHGE-YHADKRLVKKSGDIIFVSLSLSILKDEK 284 Query: 528 GEVERLLGINMDMTEVKQLNEALFQEKERLHITLDS 563 G L+G D+T+ K+ E L+++K LH Sbjct: 285 GNPTALVGYCQDITKRKEAEEKLYEQKNILHYQAHH 320 >UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TLA6_ACIAC Length = 1120 Score = 658 bits (1697), Expect = 0.0, Method: Composition-based stats. Identities = 195/1008 (19%), Positives = 372/1008 (36%), Gaps = 72/1008 (7%) Query: 142 LVVLLTPGDDPLRAFLIWVLSESIGALALVPLGLLFKPHYLLRHRNPRLLFESLLTLAIT 201 L R F +W + ++ L+ L + +L++ + Sbjct: 109 LGTGQDAQVAVSRYFSLW--GHGVESVTLLLFALRASAAGPG-------MAWALVSALAS 159 Query: 202 LTLSWLSMLYLP--WPFTFIIVLLMWSAVRLPRMEAFLIFLT------------------ 241 L ++W + +P W L +A+ + A L Sbjct: 160 LAIAWTATTDVPRDWLVAAGHAPLRIAALVSGTLMALSACLFYGMRQRRTDASVKRHGRR 219 Query: 242 -TVMMVSLMMAADPSLLATPR-----TYLMSHMPWLPFLLILLPANIMTMVM---YAFRA 292 T+ ++ MAA L+A P +++H + +L A + + R Sbjct: 220 RTMAAAAVSMAAAQFLMAVPPERFYWARMLAHALHVAGYALLFQAVFIAGIRMPYARLRE 279 Query: 293 ERKHISESETHFRNAMEYSAIGM---ALVGTEGQWLQT--NKALCQFLGYSQEELR--GL 345 + ESE+ + + + +G+ +AL + +G S ++ Sbjct: 280 AESRLRESESRLQLLGRNLPDSVPYQMVREPDGRRRFVHMGEALERLVGVSAADVMEDAQ 339 Query: 346 TFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTP- 404 PED + E S+ R +G W L+ S G+ Sbjct: 340 RLFDRIDPEDRAAQAEADEVSYRTMGVGESV-VRMRRMDGAPRWIRLSSSPRLLQGGSGR 398 Query: 405 LYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI 464 + + + D+ + + + +++ ++ GI + I + + Sbjct: 399 VIWDGVLTDVTQQREAQDLSRAHEIQLASLLGRMPGGISRLDRDLRILYVNPSQAQWLRR 458 Query: 465 PPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRV 523 P + + + E Q + +LQ R P ++R + Sbjct: 459 TPQELEGQRA-SDVLSAELLQSLHPHMLQALQGR-PVVFDYRSPYRGAGPEFFHTTIIPE 516 Query: 524 LNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPV 583 +G V ++ +D+TE K L L Q++ RL +++I + V D A + NPV Sbjct: 517 TGPDGRVVAIMVFAVDVTEQKHLALELSQQRSRLASLVNAIPDVVFLKDAAGRYLSCNPV 576 Query: 584 AEKMSGWTQEEALGVPLLTVLHITFGDN-GPLMENIYSADTSRSAIEQDVVLHCRSGGSY 642 E+ G + + +G+ ++ L E +A + + ++ + G + Sbjct: 577 FERYLGRRERDIVGLGDEELMTPVEAARVRQLDERAMAA--WQPLVYEETLTFAEDGYAG 634 Query: 643 DVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRI 702 TP+ + G G + V +D+T+ +K +Q+ A DALT L NR +L+ Sbjct: 635 YFETIKTPIRDMHGHVTGLLSVSRDITDRKKAEQQIELLAFFDALTGLPNRRLLLDRLQR 694 Query: 703 LLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGG 762 + AL+FIDLD FK +ND+ GH GD LL ++A + +R+SD +AR GG Sbjct: 695 AGAACQRNEKLGALLFIDLDNFKDLNDTLGHDMGDRLLVQVAQRLQECVRTSDTVARFGG 754 Query: 763 DEFGLLLPDCNVE------SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNH 816 DEF ++L + + A +A ++++ +N F + H S GITL D Sbjct: 755 DEFVVMLEGLDADTALAALQAEQVAEKLLAQLNR-PFEMGAQQHYSTPSIGITLFGDQRR 813 Query: 817 QAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAH 876 E++ +AD+A Y +K GR ++P A + R+ + D + + I ++L + Sbjct: 814 TVDELLKRADLAMYQAKAAGRNTQRFFDPDMQAQVTARSQLESDLR-QGIARHELTVHLQ 872 Query: 877 GVASPRIPEARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAA 935 + R +L W +I F + L L R+V +Q Sbjct: 873 PIVD---GSTRLCGAEALVRWRHPVKGLISPADFIPLAEETGLILPLGRQVLQTACEQLV 929 Query: 936 KA---VASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE- 991 + A+ +I++ +S V ++L L + P+ L L + +L E Sbjct: 930 RWATHPATASFTIAVNVSARQFRQPDFVAEVLGTLAGTGANPQRLKLELTESLLLGDVED 989 Query: 992 ---SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITI 1048 + +L+ G L G + LK D + +D +V + D ++ Sbjct: 990 TICRMAQLKRVGVGFALDDFGTGYSSLSYLKRLPLDLVKIDQSFVRDVLTDPNDAAIVRT 1049 Query: 1049 IQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 I A+ L ++ +A V + L G + G + PL+ Sbjct: 1050 ILALAKSLDLQVVAEGVETAGQLSFLKLHGCEGFQGYLFGRPVPLEAF 1097 >UniRef50_A4U4T7 Two-component sensory box protein n=3 Tax=Magnetospirillum RepID=A4U4T7_9PROT Length = 828 Score = 658 bits (1697), Expect = 0.0, Method: Composition-based stats. Identities = 146/687 (21%), Positives = 288/687 (41%), Gaps = 21/687 (3%) Query: 416 ELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVW 475 E ++ R G+G+ + + + + ++ + + Sbjct: 130 ERSHAASALKRSEGRFRALFANAGLGVVLADAHGRMVEANPAFLSMVGY-GEVELRGEKF 188 Query: 476 YECVLPEDRQHAEKVIRDSLQS-RSPFKLEFRITVKD-GIRHIRALANRVLNKEGEVERL 533 + P+D + + + L R F+L R KD I + + +G+ Sbjct: 189 RDITHPDDIGLNDTLRAEVLDGSRDGFQLTKRYIAKDGRIIWAKLTCTVMREADGQQPFT 248 Query: 534 LGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQE 593 + + D+TE K+L + + ++ G+ + D +I +NP +++G+T + Sbjct: 249 VTVVEDITERKRLEDNM----RLAATVFENSGDGLFVTDAENRIIHVNPAFTRITGFTAD 304 Query: 594 EALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLST 653 E LG + + + +++ + ++ + G + +I + Sbjct: 305 EVLGRNPRLL--ASGRHDHDFFIQLWTVLLRDGKWQGEIWDRRKDGEMFAGWQNIAVVRD 362 Query: 654 LDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQR 713 DG V VI D+T +++ +LSY+A+HD LT L NR F+++L + + H Sbjct: 363 TDGKVQNFVAVISDITTRKQVEERLSYAANHDPLTRLPNRTLFQERLTRAIARASRNHNL 422 Query: 714 HALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC- 772 AL+FIDLDRFK VND+ GH AGD LL+++A + S +R D +ARL GDEF ++L D Sbjct: 423 VALLFIDLDRFKQVNDTMGHLAGDMLLQQVAERLSSCIRQGDTVARLSGDEFTIILEDVQ 482 Query: 773 NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYAS 832 + A + +++ + + + G H + +S G++L + ++ AD A Y + Sbjct: 483 DPRDAAVVGHKVLRLLQEPVALTGGEAH-ISSSIGVSLYPTDAGDPQTLLKLADAAMYRA 541 Query: 833 KNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLI 892 K+ GR + A ER A+ + + + Q ++ + + R + + Sbjct: 542 KHLGRNSCQFHSEAVNAEAFERLALE-NALRGAVDQGQFLLHYQPIFDVK--SGRAVAVE 598 Query: 893 SLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAA--KAVASKGISISLPL 949 +L W E ++ F + + + R VF + +QA + + + + L Sbjct: 599 ALLRWRHPEVGVVAPNQFLALAEETGMIVPIGRWVFDQACRQAKLWRDAGHVDLRLHINL 658 Query: 950 SVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILD---HAESV-QKLRLAGCRIVL 1005 S L L+ + LE S LPP+ L L + ++D ++ + G + + Sbjct: 659 SPRQLRQPDLIEMVAAALEVSQLPPQALVLEVMETCVIDKAFDPSALFARFAALGVGLAI 718 Query: 1006 SQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPV 1065 + G F L+ L + N+ + + ++T I A+ L M +A + Sbjct: 719 DEFGSGYSSFAFLRRLPVTILKVAQSFVRNLSSSEDESEIVTAIVALARGLHMTVVAPGI 778 Query: 1066 VLPLVMDTLSGIGVDLIYGEVIADAQP 1092 +D L+G G D + G +++ P Sbjct: 779 ENKAQLDFLTGFGCDKVQGFLLSKPLP 805 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 51/254 (20%), Positives = 101/254 (39%), Gaps = 4/254 (1%) Query: 296 HISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPED 355 + SE FR + +G+ L G+ ++ N A +GY + ELRG F+ +T P+D Sbjct: 137 ALKRSEGRFRALFANAGLGVVLADAHGRMVEANPAFLSMVGYGEVELRGEKFRDITHPDD 196 Query: 356 LNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDIN 415 + + +++ G + + + KRY ++G ++WA L +++R DG + + +EDI Sbjct: 197 IGLNDTLRAEVLDGSRDGFQLTKRYIAKDGRIIWAKLTCTVMREADGQQPFTVTVVEDIT 256 Query: 416 ELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVW 475 E KR + M E G G++ + + I + + Sbjct: 257 ERKR----LEDNMRLAATVFENSGDGLFVTDAENRIIHVNPAFTRITGFTADEVLGRNPR 312 Query: 476 YECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLG 535 D ++ L+ + + V + +G+V+ + Sbjct: 313 LLASGRHDHDFFIQLWTVLLRDGKWQGEIWDRRKDGEMFAGWQNIAVVRDTDGKVQNFVA 372 Query: 536 INMDMTEVKQLNEA 549 + D+T KQ+ E Sbjct: 373 VISDITTRKQVEER 386 Score = 86.1 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 58/145 (40%), Gaps = 3/145 (2%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 ERK + ++ E S G+ + E + + N A + G++ +E+ G + L Sbjct: 256 TERKRLEDNMRLAATVFENSGDGLFVTDAENRIIHVNPAFTRITGFTADEVLGRNPRLLA 315 Query: 352 WPE-DLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQ 410 D + +Q L+ + E ++G++ +++VR TDG F+A Sbjct: 316 SGRHDHDFFIQLWTVLLRD--GKWQGEIWDRRKDGEMFAGWQNIAVVRDTDGKVQNFVAV 373 Query: 411 IEDINELKRTEQVNQQLMERITLAN 435 I DI K+ E+ L Sbjct: 374 ISDITTRKQVEERLSYAANHDPLTR 398 >UniRef50_A6QA23 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QA23_SULNB Length = 703 Score = 658 bits (1697), Expect = 0.0, Method: Composition-based stats. Identities = 162/693 (23%), Positives = 287/693 (41%), Gaps = 30/693 (4%) Query: 422 QVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQ-VWYECVL 480 ++++++ ER LA I +W++ + E+ PN + W + Sbjct: 8 EMDEKIKERFELALCGSKTSILDWDMVNHTLYISPSWKEMLGYREDELPNAESTWKKLAY 67 Query: 481 PEDRQHAEKVIRDSL-QSRSPFKLEFRITVKDGIR-HIRALANRVLNKEGEVERLLGINM 538 P D + + ++ + + R F+ R+ KDG + A + ++ G R++G + Sbjct: 68 PRDIVNVMRSLKKHIREHRKVFENNHRLRHKDGHWIWVLGRARIIYDEAGNPIRMVGTHT 127 Query: 539 DMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGV 598 D+TE K+L Q+ + L+ I +AV+ +DM I N +E + + +E +G Sbjct: 128 DITEEKELQLKYSQQAQ----VLEQIHDAVILLDMDGFIRSWNKGSEILFEYRADEVIGK 183 Query: 599 PLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSN 658 + E S + ++ L +SG +S + L +G Sbjct: 184 NFSILFSDNI---TSAYEKWISELKENGEYKGEMFLQKKSGEPLYAVFSFSLLKNQNGET 240 Query: 659 IGSVLVIQDVTESRKMLR-------QLSYSASHDALTHLANRASFEKQLRILLQTVNSTH 711 V +I D+TE +K L Y A HDALT L NR F +L ++ + Sbjct: 241 TEVVSLIHDITEQKKAEAVLQEQKNILRYQAHHDALTRLPNRVLFFDRLEQSIRKTARSE 300 Query: 712 QRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD 771 + AL FIDLD+FK +NDS GH+ GD +LR A + +R D LARL GDEF +++ D Sbjct: 301 KDFALFFIDLDKFKHINDSLGHSIGDRVLRVTAKRIKETIRQEDTLARLSGDEFTVIMED 360 Query: 772 C-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACY 830 + E A +A +I+ + +I + + S GI+L + ++ AD A Y Sbjct: 361 LGHPEDASVLAEKILLVLQKPMYI-DEYTLYISGSIGISLYPQDAMDTESLLKYADTAMY 419 Query: 831 ASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLW 890 +K GR Y P+ ER AM + I++ +L + R + Sbjct: 420 KAKENGRNTFEFYAPEMTEYALERIAMKTSLK-EAIEKEELCVHYQPQIDARAEC--IIG 476 Query: 891 LISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGIS--ISL 947 + +L W ++ + F D L +D+ V +Q + +S ++L Sbjct: 477 VEALVRWQHPTRGLLHPEAFISLAEDTGLIVDIDKWVMRTAMKQVSTWHQEGLVSDVLAL 536 Query: 948 PLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAIL-DHAESVQKLRLA---GCRI 1003 +S+ L + ++ L++ P+ L L IP ++ +H E++++L+ G I Sbjct: 537 NISIKQLEGHNFMEEIAACLDDFDFKPKWLELEIPEGQVMKNHTETIERLKELSVMGIGI 596 Query: 1004 VLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAG 1063 + G + LK + L +D + N D ++ I A L + IA Sbjct: 597 SIDDFGTGYSSLSLLKRLPINRLKIDKSFIEFIP-NEEDVAIVKAIIALANSLKLDVIAE 655 Query: 1064 PVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 V D L G I G + + + Sbjct: 656 GVETDDQKDFLVENGCTKIQGYYYSRPIASEQM 688 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 63/355 (17%), Positives = 132/355 (37%), Gaps = 19/355 (5%) Query: 302 THFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRG--LTFQQLTWPEDLNKD 359 F A+ S + L + + + LGY ++EL T+++L +P D+ Sbjct: 15 ERFELALCGSKTSILDWDMVNHTLYISPSWKEMLGYREDELPNAESTWKKLAYPRDIVNV 74 Query: 360 LQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKR 419 ++ ++K I + R +++G +W L ++ G P+ + DI E K Sbjct: 75 MRSLKKHIREHRKVFENNHRLRHKDGHWIWVLGRARIIYDEAGNPIRMVGTHTDITEEKE 134 Query: 420 TEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECV 479 + Q + + ++A + ++ I SW+K L+E + + Sbjct: 135 LQLKYSQQAQVLEQIHDA----VILLDMDGFIRSWNKGSEILFEYRADEVIGKN--FSIL 188 Query: 480 LPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVL-NKEGEVERLLGINM 538 ++ A + L+ +K E + K G + +L N+ GE ++ + Sbjct: 189 FSDNITSAYEKWISELKENGEYKGEMFLQKKSGEPLYAVFSFSLLKNQNGETTEVVSLIH 248 Query: 539 DMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEE---- 594 D+TE K+ L ++K L +A+ + ++ F + + + + + E Sbjct: 249 DITEQKKAEAVLQEQKNILRYQAHH--DAL--TRLPNRVLFFDRLEQSIRKTARSEKDFA 304 Query: 595 ALGVPLLTVLHITFGDNGPLMENIYSADTSR--SAIEQDVVLHCRSGGSYDVHYS 647 + L HI + + + R I Q+ L SG + V Sbjct: 305 LFFIDLDKFKHINDSLGHSIGDRVLRVTAKRIKETIRQEDTLARLSGDEFTVIME 359 Score = 78.4 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 62/181 (34%), Gaps = 25/181 (13%) Query: 545 QLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVL 604 + E + KER + L +++ DM +++P ++M G+ ++E Sbjct: 5 KKTEMDEKIKERFELALCGSKTSILDWDMVNHTLYISPSWKEMLGYREDELPNAESTWKK 64 Query: 605 HITFGDNGPLMENIYSADTS-RSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVL 663 D +M ++ R E + L + G V + G+ I V Sbjct: 65 LAYPRDIVNVMRSLKKHIREHRKVFENNHRLRHKDGHWIWVLGRARIIYDEAGNPIRMVG 124 Query: 664 VIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDR 723 D+TE +++ + S A L + A++ +D+D Sbjct: 125 THTDITEEKELQLKYSQQAQV---------------LEQI---------HDAVILLDMDG 160 Query: 724 F 724 F Sbjct: 161 F 161 Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 72/185 (38%), Gaps = 7/185 (3%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 E K + + +E + L+ +G NK Y +E+ G F + Sbjct: 130 TEEKELQLKYSQQAQVLEQIHDAVILLDMDGFIRSWNKGSEILFEYRADEVIGKNF-SIL 188 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 + +++ ++ + E Y E ++G+ ++A+ + SL+++ +G ++ I Sbjct: 189 FSDNITSAYEKWISELK-ENGEYKGEMFLQKKSGEPLYAVFSFSLLKNQNGETTEVVSLI 247 Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPN 471 DI E K+ E V Q+ + + PN + R+ + + + Sbjct: 248 HDITEQKKAEAVLQEQKNILRYQAHHDALTRL-----PNRVLFFDRLEQSIRKTARSEKD 302 Query: 472 WQVWY 476 + +++ Sbjct: 303 FALFF 307 >UniRef50_A6TT69 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TT69_ALKMQ Length = 1242 Score = 657 bits (1696), Expect = 0.0, Method: Composition-based stats. Identities = 156/807 (19%), Positives = 325/807 (40%), Gaps = 32/807 (3%) Query: 311 SAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGL--TFQQLTWPEDLNKDLQQVEKLIS 368 + +G + L ++ + + G ++ L PED + + Sbjct: 283 AGVGSYRYDLGNEELSWSEEVYRIFGVDPQKFTKRFENIITLIHPEDQDTVQNSTAGCLK 342 Query: 369 GEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLM 428 G+ Y +E R +G + + D + + I+DI E K + ++ Sbjct: 343 GK--AYEIEYRIIGLDGSEKCVISKGEPIFDDDQVVIGILGTIQDITENKLLKTQLEKSY 400 Query: 429 ERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI-PPHIKPNWQVWYECVLPEDRQHA 487 + + A +G WE ++ N +W + + +Y I +++ + V PEDR+ Sbjct: 401 KNLAEAQRLAKMGSWEMDVIRNKNTWSEEYYHIYGITNKEYDGSYEAFLNFVHPEDRELI 460 Query: 488 EKVIRDSLQSRSPFKLEFRITVKD-GIRHIRALANRVLNKEGEVERLLGINMDMTEVKQ- 545 E ++ Q + PF +EFRI D +RHI + + EG + GI D+TE K Sbjct: 461 EDILAHPPQVQ-PFDMEFRIIRPDGSVRHIYQVVEMTFDLEGHLTYRRGIIQDITERKAL 519 Query: 546 ------LNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVP 599 + E + ++R + + + + I +++P EK+ G+ +E G Sbjct: 520 VKKMQGIQENINHIQKRFQVLIRDSSDVFEIVSPDGTIEYISPAVEKILGYQPKEMEGRN 579 Query: 600 LLTVLHITFGDNGPLMENIYSADTSRSA--IEQDVVLHCRSGGSYDVHYSITPLSTLDGS 657 L+ + P +E ++ S I++++ + G V ++ + S Sbjct: 580 LMEF---AWEIEKPKLEKMFKVALSEPNKNIKREISAETKLGKRIYVELTMN-NQLEEPS 635 Query: 658 NIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALV 717 G VL +DVTE + +++++ A+HD +T L NR FEK++ Q A++ Sbjct: 636 IKGIVLNWRDVTERVEAQKKMNHIATHDQMTQLPNRLHFEKKIEYQCQEAKEKGTTFAVM 695 Query: 718 FIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVES 776 +D+D FK +ND+ G GD L+ + A + L + + R GD+FG+L+ + ++E+ Sbjct: 696 MLDIDDFKYINDALGMGFGDQLITQAARRLKDFLGETRCICRYSGDQFGILIYNLKDIEA 755 Query: 777 ARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGG 836 + IA +II + F + + S G+ + D+ + ++ +IA + +K G Sbjct: 756 YKNIAMKIIDLFSS-SFKIDPYEIYITMSVGVAIYPDDGQETQSLIKHGNIALFRAKEAG 814 Query: 837 RGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKL 896 + R +Y P+ + + + D + R IK N+ + + + E + +L Sbjct: 815 KNRYEMYSPKMDVKNYKAFTLKNDLR-RAIKNNEFKVYYQPQVNLQTSE--IIGAEALIR 871 Query: 897 WSCEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS--KGISISLPLSVAG 953 W ++ + F + L + + + K + I +S+ S Sbjct: 872 WEHPTWGLVSPKEFISLAEETGFIITLGNWILRQVCETYQKWLKDGLPAIKVSVNYSGIQ 931 Query: 954 LSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVG 1009 +V ++ + L P L + I +++ ++ +Q L+ G ++ + G Sbjct: 932 FFQKDIVENIKNTIHEFQLDPHFLVMEITETVLMNQSQQVSADIQSLQELGIKVAIDDFG 991 Query: 1010 RDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPL 1069 L + D L +D + + +I + A+ L ++ +A V Sbjct: 992 AGFSSLTYLNSFNVDILKIDRFFIKGIPLDETSNRIIEAVINLAKDLRIRLVAEGVETWD 1051 Query: 1070 VMDTLSGIGVDLIYGEVIADAQPLDLL 1096 + L + + G + + P + Sbjct: 1052 QLSYLRKLNCTVGQGFLYSRPVPQEDF 1078 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 69/418 (16%), Positives = 158/418 (37%), Gaps = 13/418 (3%) Query: 271 LPFLLILLPANIMTMVMYAFRAERK-HISESETHFR-NAM---EYSAIGMALVGTEGQWL 325 + L +L ++ M + + + +S R N + +IG + + L Sbjct: 111 MTILPVLRKQTLIGMHIVILDLTKGMKLEKSLNQLRENVFYGQKLLSIGSWTYDFQSEEL 170 Query: 326 QTNKALCQFLGYSQEELRGL--TFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNR 383 ++ + + EE + PED + +EK + G N + E R Sbjct: 171 FGSQEVYDIFQRTTEEFDNKIESVYTFIHPEDQQVVRKSMEKALRG--NDHDQEYRIMVP 228 Query: 384 NGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIW 443 G + ++ P+ I I+DI K E +++ + + A + G+G + Sbjct: 229 GGKEKYIHSRAEVLFDDMNRPIKMIGTIQDITGRKLIENDLKRIGKDLNHAQKVAGVGSY 288 Query: 444 EWELKPNIFSWDKRMFELYEIPPH-IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFK 502 ++L SW + ++ ++ + P ++ + PED+ + L+ + ++ Sbjct: 289 RYDLGNEELSWSEEVYRIFGVDPQKFTKRFENIITLIHPEDQDTVQNSTAGCLKGK-AYE 347 Query: 503 LEFRITV-KDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITL 561 +E+RI + + + + + + V +LG D+TE K L L + + L Sbjct: 348 IEYRIIGLDGSEKCVISKGEPIFDDDQVVIGILGTIQDITENKLLKTQLEKSYKNLAEAQ 407 Query: 562 DSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSA 621 +D+ + + G T +E G L+ ++ L+E+I + Sbjct: 408 RLAKMGSWEMDVIRNKNTWSEEYYHIYGITNKEYDG-SYEAFLNFVHPEDRELIEDILAH 466 Query: 622 DTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLS 679 + + + G ++ + L+G +IQD+TE + +++++ Sbjct: 467 PPQVQPFDMEFRIIRPDGSVRHIYQVVEMTFDLEGHLTYRRGIIQDITERKALVKKMQ 524 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 65/385 (16%), Positives = 151/385 (39%), Gaps = 7/385 (1%) Query: 297 ISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDL 356 + E + + + I A+ +G ++ N++ C L ++G T + PE+ Sbjct: 18 LKELKQGYHQWVVDFPIASAVCDVKGLIIEANESFCHLLEDIAPNVQGKTIFEFLKPEET 77 Query: 357 NKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINE 416 + + VE+L GE + +++ + + + + + V T + I D+ + Sbjct: 78 DVEFTYVEELHKGE--SITIKSDLFTQTKGIRNIEMTILPVLRKQ-TLIGMHIVILDLTK 134 Query: 417 LKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELY-EIPPHIKPNWQVW 475 + E+ QL E + + IG W ++ + + +++++ + Sbjct: 135 GMKLEKSLNQLRENVFYGQKLLSIGSWTYDFQSEELFGSQEVYDIFQRTTEEFDNKIESV 194 Query: 476 YECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVK-DGIRHIRALANRVLNKEGEVERLL 534 Y + PED+Q K + +L+ + E+RI V ++I + A + + +++ Sbjct: 195 YTFIHPEDQQVVRKSMEKALRG-NDHDQEYRIMVPGGKEKYIHSRAEVLFDDMNRPIKMI 253 Query: 535 GINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEE 594 G D+T K + L + + L+ G D+ + + ++ G ++ Sbjct: 254 GTIQDITGRKLIENDLKRIGKDLNHAQKVAGVGSYRYDLGNEELSWSEEVYRIFGVDPQK 313 Query: 595 ALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTL 654 ++ + ++ ++N + A E + + G V P+ Sbjct: 314 FT-KRFENIITLIHPEDQDTVQNSTAGCLKGKAYEIEYRIIGLDGSEKCVISKGEPIFDD 372 Query: 655 DGSNIGSVLVIQDVTESRKMLRQLS 679 D IG + IQD+TE++ + QL Sbjct: 373 DQVVIGILGTIQDITENKLLKTQLE 397 Score = 58.3 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 27/219 (12%), Positives = 73/219 (33%), Gaps = 24/219 (10%) Query: 301 ETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDL 360 + F+ + S+ +V +G + A+ + LGY +E+ G + W + K Sbjct: 534 QKRFQVLIRDSSDVFEIVSPDGTIEYISPAVEKILGYQPKEMEGRNLMEFAWEIEKPKLE 593 Query: 361 QQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRT 420 + + +S E + G ++ L ++ + + + + D+ E Sbjct: 594 KMFKVALSEPNKNIKREISAETKLGKRIYVELTMNN-QLEEPSIKGIVLNWRDVTERVEA 652 Query: 421 EQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVL 480 ++ + + PN ++K++ Y+ + + Sbjct: 653 QKKMNHIATHDQMTQL------------PNRLHFEKKIE--YQCQEAKEKGTTFAVMMLD 698 Query: 481 PEDRQHA---------EKVIRDSLQSRSPFKLEFRITVK 510 +D ++ +++I + + F E R + Sbjct: 699 IDDFKYINDALGMGFGDQLITQAARRLKDFLGETRCICR 737 >UniRef50_B8GSM8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GSM8_THISH Length = 1301 Score = 657 bits (1696), Expect = 0.0, Method: Composition-based stats. Identities = 197/843 (23%), Positives = 340/843 (40%), Gaps = 31/843 (3%) Query: 279 PANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYS 338 I + R +S+SE +R A+E + G+ E + ++ LG+ Sbjct: 341 ALRIADQLTVDIRDREARLSDSEYRWRFALEGAGDGVWDWNLEDNTVYFSRRWKSMLGFE 400 Query: 339 QEEL-RGLT-FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSL 396 +E+ +GL +Q+ P+DL+ L +++ ++G+ Y E R ++G W L + Sbjct: 401 DQEIGQGLDEWQRRVHPDDLDSTLAELKGYLNGDRGEYVSEHRMRCKDGSWKWILDRGMV 460 Query: 397 V-RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSW- 454 V R G PL I DI+ K E ++++ R+ ++E+ L+ + S Sbjct: 461 VSRDGQGRPLRMIGTHTDISGQKALEAAREEILARLQTITSRVPGVVYEFRLQADGRSCF 520 Query: 455 ---DKRMFELYEI-PPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVK 510 + + ++Y + P +K + + + P+D + I+ S + +P++ E+R+ Sbjct: 521 PYASEAIRQIYRVSPEEVKTDASAVFAILHPDDYDAVVESIQHSARHLTPWRHEYRVKFP 580 Query: 511 DGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEK---ERLHITLDSIGEA 567 DG + + G D+TE K+ AL + +R LD + Sbjct: 581 DGTVRWLYGDSLPHREPDGSTLWYGFITDITERKEAEAALRKAHSETQRFREALDYVSSF 640 Query: 568 VVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDN-GPLMENIYSADTSRS 626 + D + T+ N ++ G + G + + +++ + + Sbjct: 641 IYMKDTQSRYTYANRATLELFGTNDHDLPGSDDFRFFSDSTAHRLREIDRHVFLGEQTSE 700 Query: 627 AIEQDVVLHCRSGGSYDVHYSI-TPLSTL--DGSNIGSVLVIQDVTESRKMLRQLSYSAS 683 IE GG V+ I TP+ IG + + D+T ++ RQL + A Sbjct: 701 EIEA-----VDPGGHRRVYLEIKTPIYDETERDEVIGLLGISTDITAIKEHERQLEHIAH 755 Query: 684 HDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLREL 743 DALT+L NR +L + A+ ++DLD FKA+ND GHA GD LL + Sbjct: 756 FDALTNLPNRVLLADRLHQAMAQAVRRGHHLAVAYLDLDGFKAINDRYGHAVGDKLLMAV 815 Query: 744 ASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVG 803 A M +LR D L+RLGGDEF +L D A + A EGR R+ Sbjct: 816 AQQMHEVLREEDTLSRLGGDEFVAVLLDLADVEACVPLLTRLLAAAARPVSIEGRELRIS 875 Query: 804 ASAGITLIDDNNH-QAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQ 862 AS G+T +A +++ QAD A Y +K G+GR V++ + + SL+ Sbjct: 876 ASLGVTFYPQAEQIEAEQLLRQADQAMYQAKLAGKGRYHVFDAELDRSVRTHHE-SLERI 934 Query: 863 WRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHA 921 + ++ ++ + R + +L W + ++ F D L+ Sbjct: 935 RSAFENDEFVLHYQPKVNMR--SGAVIGAEALIRWQHPDKGLLPPGDFLPVIEDHPLAIE 992 Query: 922 LDRRVFHEFFQQAAKAV-ASKGISISLPLSVAGLSSATLVNDLLEQLENSP-LPPRLLHL 979 L V QQ A A + +S+ + + L T V+ L L+ P + P L L Sbjct: 993 LGEWVITRALQQMASWQTAGLVLPVSVNIGASQLRQDTFVSRLRTLLDGFPEISPGSLEL 1052 Query: 980 IIPAEAILDHAESVQKL----RLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCAN 1035 I + L V +L R G I L G LK A + +D + Sbjct: 1053 EILETSALGDLALVTRLLDQCRAIGVNIALDDFGTGYSSLTYLKRLPAGVVKVDQSFIRD 1112 Query: 1036 VQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDL 1095 + + D ++ + G A + IA V D L IG +L G IA P + Sbjct: 1113 ILMDPEDLAILDGVLGLAGAFNRQVIAEGVETVEHGDMLLRIGCELAQGYGIARPMPAEA 1172 Query: 1096 LVN 1098 L + Sbjct: 1173 LHD 1175 >UniRef50_A0L8P4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8P4_MAGSM Length = 754 Score = 657 bits (1695), Expect = 0.0, Method: Composition-based stats. Identities = 137/636 (21%), Positives = 257/636 (40%), Gaps = 26/636 (4%) Query: 476 YECVLPED-------RQHAEKVI---RDSLQSRSPFKLEFRITVKDGIRHIRALANRVLN 525 + + ED R A +++ + + + + +R I A + L Sbjct: 96 IDLIHKEDPKEVFLMRVAAMGRFIETQNAHREAEAHARQKELQAAEQLRRIEEQARQQLE 155 Query: 526 KE--GEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPV 583 + L N ++ + +H ++ EA++ D I +NP Sbjct: 156 QRVRERTLELTQSNERLSNEVAVRMRAESGLRLIHKVFENTSEAIILTDPQGMILDINPA 215 Query: 584 AEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYD 643 +++G+++EEALG + + + N++ + ++ ++G Y Sbjct: 216 FTEITGFSREEALGHNPRSFK--SDRHDATFYTNMWRKIAEEGFWQGEIWDRRKNGEIYP 273 Query: 644 VHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRIL 703 +I + G + + D++ES+ +L A +DALT L NR F +L Sbjct: 274 KRLTINAVRNQAGEVENYIGIFSDISESKATELKLERLAYYDALTQLPNRMLFHDRLEHE 333 Query: 704 LQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGD 763 ++ A+ FIDLDRFK VND+ GH+AGD LL+ +A + +R++D +AR+GGD Sbjct: 334 FYNAQRHRKQVAVFFIDLDRFKQVNDTLGHSAGDELLQHVAQRLEGCVRAADTVARMGGD 393 Query: 764 EFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVM 822 EF ++L D + ES +A +++ + +G VGAS GI L DN + + Sbjct: 394 EFTVILADISDNESVARVARKVLEELQKSI-SIKGHDIFVGASIGIALYPDNGNDVETLT 452 Query: 823 SQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPR 882 AD+A Y +K GRG + + + S+R ++ + + N L + + + Sbjct: 453 KNADMAMYRAKESGRGNYKFFSEEMNVSTSQRLSLE-SQLHHAVNANLLEVYYQPKLNMQ 511 Query: 883 IPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK 941 + + +L W +G +I F + L L R V + A+ V Sbjct: 512 --SGIMVGMEALVRWPQADGSMIPPIQFIPVAEETGLIVPLGRLVMRQAMLDCARWVRET 569 Query: 942 G--ISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQK 995 G + +++ LS S LV ++ + L L R + I ++ E ++++ Sbjct: 570 GMNLRVAVNLSAREFQSPGLVVEIEQTLAECGLDARHFEVEITESLMMHDVENAIATLEQ 629 Query: 996 LRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQR 1055 + G I + G + LK L +D ++ + D ++ I A+ Sbjct: 630 ISRLGIHIAMDDFGTGYSSLSYLKKFPIHSLKVDRSFVKDIPDDPNDIEIVAAILSLAKV 689 Query: 1056 LGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQ 1091 L +K +A V + L D G + Sbjct: 690 LNLKVVAEGVETQEQLSFLRQNLCDECQGYSFSKPL 725 Score = 83.8 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 57/149 (38%), Gaps = 4/149 (2%) Query: 299 ESETHFRNA---MEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPED 355 +E+ R E ++ + L +G L N A + G+S+EE G + Sbjct: 181 RAESGLRLIHKVFENTSEAIILTDPQGMILDINPAFTEITGFSREEALGHNPRSFKSDRH 240 Query: 356 LNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDIN 415 + + I+ E + E +NG++ L ++ VR+ G +I DI+ Sbjct: 241 DATFYTNMWRKIA-EEGFWQGEIWDRRKNGEIYPKRLTINAVRNQAGEVENYIGIFSDIS 299 Query: 416 ELKRTEQVNQQLMERITLANEAGGIGIWE 444 E K TE ++L L + + Sbjct: 300 ESKATELKLERLAYYDALTQLPNRMLFHD 328 >UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YCL1_NITMU Length = 1054 Score = 656 bits (1694), Expect = 0.0, Method: Composition-based stats. Identities = 152/700 (21%), Positives = 268/700 (38%), Gaps = 38/700 (5%) Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQV 474 E + T + R E+ + + + +K L + Sbjct: 363 EEQQATTRELSNAKLRTERILESITDAFYTLDREWRFTYVNKEAENLLQRNREDLLGRVC 422 Query: 475 WYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLL 534 W E + R +++R+ EF + + + A E L Sbjct: 423 WEEFKETAGTTFDREYHRALMENRTVTFEEFYVPLDE---WFEVHAYP------SEEGLT 473 Query: 535 GINMDMTEVKQLNEALFQEKERLHIT---LDSIGEAVVCIDMAMKITFMNPVAEKMSGWT 591 D+TE K+ +A + R+ LD +A++ M I F N AE++ GWT Sbjct: 474 VYFRDITERKESEQARQEAHVRIRQQASLLDKATDAIIVFGMDNCIEFWNQGAERLYGWT 533 Query: 592 QEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPL 651 EE +G + + DN + + A S ++ R +V T + Sbjct: 534 SEEVMGREVEMLY-----DNVAVFDEANRALLSSGEWRGELAQRRRDQSMLNVEAHWTLV 588 Query: 652 STLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTH 711 DG + D+T+ + ++ + A +D+LT L NR +L L Sbjct: 589 RNDDGEPQAIFAINTDITQRKSAENEILHLALYDSLTGLPNRRLLLDRLGHALAVSARNQ 648 Query: 712 QRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLL-- 769 + AL+FIDLD FK +ND+ GH GD LLR++A + S +R SD +ARLGGDEF ++L Sbjct: 649 RMGALLFIDLDNFKLLNDTLGHDMGDLLLRQVAPRLSSCVRESDTVARLGGDEFVVILMG 708 Query: 770 -----PDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQ 824 D + I RI SA F + +H + S GI L +D + E++ + Sbjct: 709 DFGEDHDEALTQISTICERIRSAFIQ-PFNLDPYIHHITPSIGIALFNDQSQTTNELLKR 767 Query: 825 ADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIP 884 AD+A Y +K GR + ++P AA + RA + + ++ + N+ ++ ++ Sbjct: 768 ADLAMYQAKASGRNAMRFFDPDMQAAMNARAILESE-LYKSWERNEFILHYQ----LQVD 822 Query: 885 EARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKG- 942 + +L W ++ F + L L V Q A Sbjct: 823 SRGIIGAEALVRWQHPRRGLLPPSEFIPQAEETGLILPLGEWVLETACNQLASWALQPET 882 Query: 943 --ISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKL 996 +++S+ +S V ++ L+ + P+ L L + ++ + + L Sbjct: 883 VQLNLSVNVSSLQFCQPDFVEQVISILDRTGANPQRLKLELTESILVHDMDDTIAKMMTL 942 Query: 997 RLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRL 1056 + G L G LK D++ +D +V + D ++ I A+ + Sbjct: 943 KARGVGFALDDFGIGYSSLYYLKRLPLDWVKIDRSFVRDVLTDNNDATIVRTILLLAKSM 1002 Query: 1057 GMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 G+ IA V D L+ G G + + PL+ Sbjct: 1003 GLAVIAEGVETGAQKDFLASHGCTAYQGYLFSRPLPLEQF 1042 Score = 82.6 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 60/352 (17%), Positives = 120/352 (34%), Gaps = 29/352 (8%) Query: 244 MMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISE-SET 302 ++ L+ S+L ++++S L ++ ++ A ++ E S Sbjct: 320 ALLVLLGGFVVSMLTAMVSFVLSGNKEKAAAL----GHVNKKLLLAMEEQQATTRELSNA 375 Query: 303 HFRN--AMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT-FQQLTWPEDLNKD 359 R +E + E ++ NK L ++E+L G +++ D Sbjct: 376 KLRTERILESITDAFYTLDREWRFTYVNKEAENLLQRNREDLLGRVCWEEFKETAGTTFD 435 Query: 360 LQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKR 419 + L+ T+ E+ Y + W + +G +YF DI E K Sbjct: 436 REYHRALMENRTVTF--EEFYVPLDE---WFEVHAYPS--EEGLTVYF----RDITERKE 484 Query: 420 TEQVNQQLMERITLANEA---GGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWY 476 +EQ Q+ RI I + + I W++ LY +V Sbjct: 485 SEQARQEAHVRIRQQASLLDKATDAIIVFGMDNCIEFWNQGAERLYGWTSEEVMGREVEM 544 Query: 477 ECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGI-RHIRALANRVLNKEGEVERLLG 535 D +L S ++ E +D ++ A V N +GE + + Sbjct: 545 LY----DNVAVFDEANRALLSSGEWRGELAQRRRDQSMLNVEAHWTLVRNDDGEPQAIFA 600 Query: 536 INMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKM 587 IN D+T+ K + L+ +L + + +D ++ ++M Sbjct: 601 INTDITQRKSAENEILHL--ALYDSLTGLPNRRLLLDRLGHALAVSARNQRM 650 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 48/137 (35%), Gaps = 11/137 (8%) Query: 540 MTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVP 599 M E + L K R L+SI +A +D + T++N AE + +E+ LG Sbjct: 362 MEEQQATTRELSNAKLRTERILESITDAFYTLDREWRFTYVNKEAENLLQRNREDLLGRV 421 Query: 600 LLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNI 659 T G + A + + D + + + +G + Sbjct: 422 CWEEFKETAGTT--FDREYHRALMENRTVTFEEFYV-----PLDEWFEVHAYPSEEGLTV 474 Query: 660 GSVLVIQDVTESRKMLR 676 +D+TE ++ + Sbjct: 475 Y----FRDITERKESEQ 487 >UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JY96_DESAC Length = 904 Score = 656 bits (1693), Expect = 0.0, Method: Composition-based stats. Identities = 138/670 (20%), Positives = 257/670 (38%), Gaps = 27/670 (4%) Query: 449 PNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRIT 508 N + + + +L E + RQ V +L S + FR Sbjct: 246 DNRLTINNQTSDLLATQKLSGDLLTQLNESL----RQGILSVFFATLISAGGVIIIFRYL 301 Query: 509 VKDGIRHIRALAN-------RVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITL 561 + + + + K V + + ++ + ++ Sbjct: 302 TQRSLNTVLQMTEAAFRNTEPARYKPTLVSEFNILGHSIVDLDHQRKESEKQLLLSSSVF 361 Query: 562 DSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSA 621 D+ E +V ++ I +NP E MSG+ +E +G + N + ++ + Sbjct: 362 DNAVEGIVITNLDGIIEQVNPACEAMSGYRLKELIGENPRIFR--SDHHNSAFYQQMWQS 419 Query: 622 DTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYS 681 E +V ++G Y ++ SI+ + G V + D++E ++ +L + Sbjct: 420 LIEEGRWEGEVWNRRKNGEVYPLNVSISRCTNSAGIPSHYVAIFHDISEIKRSEEKLQHQ 479 Query: 682 ASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLR 741 A HDALT+L NR F +L + + + A++++D+D FK +NDS GH GD LL+ Sbjct: 480 AYHDALTNLPNRKLFHDRLSVAVAHARQHKTKLAVIYLDIDNFKYINDSLGHHYGDKLLQ 539 Query: 742 ELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVH 800 +++ +LS R D ARLGGDEF +L+P+ + + RI+ + + GR + Sbjct: 540 QISERLLSCTRQEDTTARLGGDEFIILMPEIEDPHDITVLCRRILKQL-ELPHALSGRDY 598 Query: 801 RVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLD 860 V S G+T+ D+ +++ ADIA Y +K G+ ++ +R + Sbjct: 599 TVNVSMGVTVFPDDADTPEDLIKNADIAMYRAKEAGKNGYQLFTAAMQQTIMQRIELEA- 657 Query: 861 EQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWS-CEGEIIDEQTFRRSFSDPALS 919 + N+ ++ + + +L W +G+++ F + L Sbjct: 658 RLSDALCRNEFVLFYQPQVD--LESEHVIGAEALIRWQKPDGQLVYPDEFIPIAEECGLI 715 Query: 920 HALDRRVFHEFFQQAAKAVASKG--ISISLPLSVAGL-SSATLVNDLLEQLENSPLPPRL 976 +D V +QA K G +S+ LS LV + L + LP Sbjct: 716 TQIDHWVLKAACRQANKWREQSGRNFKMSVNLSSEQFAKDQELVQRVKNVLNKTGLPAEC 775 Query: 977 LHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGEL 1032 L L + A++ ES + +L G I + G + +K A YL +D Sbjct: 776 LTLEVTENAVMSDTESAIAIMTQLTALGVSIAIDDFGTGYSSLSYVKNFPARYLKIDRSF 835 Query: 1033 CANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQP 1092 ++ G+ D + I + L M+ IA V +D L + G Sbjct: 836 VKDIPGDSDDMAIAASIISLGRNLNMEVIAEGVEEQTQIDFLKQHRCQQVQGYFYGKPC- 894 Query: 1093 LDLLVNSSYF 1102 + +F Sbjct: 895 AAEFFSQQFF 904 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 42/208 (20%), Positives = 82/208 (39%), Gaps = 3/208 (1%) Query: 230 LPRMEAFLIFLTTVMMV--SLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVM 287 L A LI V+++ L + ++L + P ++ NI+ + Sbjct: 281 LSVFFATLISAGGVIIIFRYLTQRSLNTVLQMTEAAFRNTEPARYKPTLVSEFNILGHSI 340 Query: 288 YAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTF 347 +RK + + + + G+ + +G Q N A GY +EL G Sbjct: 341 VDLDHQRKESEKQLLLSSSVFDNAVEGIVITNLDGIIEQVNPACEAMSGYRLKELIGENP 400 Query: 348 QQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYF 407 + + QQ+ + + E + E +NG+V +++S ++ G P ++ Sbjct: 401 RIFRSDHHNSAFYQQMWQSLI-EEGRWEGEVWNRRKNGEVYPLNVSISRCTNSAGIPSHY 459 Query: 408 IAQIEDINELKRTEQVNQQLMERITLAN 435 +A DI+E+KR+E+ Q L N Sbjct: 460 VAIFHDISEIKRSEEKLQHQAYHDALTN 487 >UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AX01_9CHRO Length = 1409 Score = 655 bits (1691), Expect = 0.0, Method: Composition-based stats. Identities = 173/816 (21%), Positives = 328/816 (40%), Gaps = 33/816 (4%) Query: 291 RAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQE-ELRGLTFQQ 349 + ++++ + + + +E + +A L N+ + G+S E +G + Sbjct: 600 KQTQENLRQQQELLKTIVEQIPVMLAYFDQHYNLLWVNREWEKIWGWSLENRQKGDLLAE 659 Query: 350 LTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIA 409 + + + K G+ + + R +G ++ A V+ +DGT IA Sbjct: 660 FEPESEYRQSVLNYIKSAQGKWRDFKILVR----DGRIIDTSWAN--VKLSDGTS---IA 710 Query: 410 QIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKP-NIFSWDKRMFELYEIPPHI 468 +DI E KR E++ ++ E+ L +A +W ++L+ ++ E Y Sbjct: 711 IGQDITERKRIEEILRESEEKYRLFFDANPNPLWVYDLETFAFLEVNQATIEHYGYTREE 770 Query: 469 KPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEG 528 + + PED E+ I + ++R +G + + L G Sbjct: 771 FLAMTI-RDIRPPEDVPLLEQYILQ-INPHFNRSGQWRHRKANGEIIDVEITSHGLEYAG 828 Query: 529 EVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMS 588 RL+ + D+TE + +AL + KER H + ++ +I +N ++S Sbjct: 829 RKARLV-LAHDITERLKAEKALQESKERFHRAIVDAPLPILIHAEDGEIVQVNHAWTELS 887 Query: 589 GWTQEEALGVPLLTVLHITFGDNGPLMENIYSA--DTSRSAIEQDVVLHCRSGGSYDVHY 646 G+ +E + +G+ ++ ++ + E + + +SG + + Sbjct: 888 GYHLDEL--STIADWTEKAYGERKDIVRSVIDQLYEIDGKVEEGEFAITIKSGETRIWDF 945 Query: 647 SITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQT 706 S PL L + + D+TE ++ QL +S HD LT L NR ++ ++ Sbjct: 946 SSAPLGKLADGRRLIISMAIDITERKQAEEQLRHSVLHDGLTGLPNRTLLLDRVEQAIKR 1005 Query: 707 VNST-HQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEF 765 + A++FIDLDRFK VNDS GH GD LL+ +A + +R +D +AR GGDEF Sbjct: 1006 KQQQPNYLFAILFIDLDRFKVVNDSLGHLVGDQLLKTIADKLQRCVRPTDTVARFGGDEF 1065 Query: 766 GLLLPDCNV-ESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQ 824 +LL D + A +A RI + F + + + AS GIT +E++ Sbjct: 1066 VILLEDLTIWTDATKMAQRITEEF-ESSFTLQEQEYFTSASIGITFCSSPEQTPSELVRN 1124 Query: 825 ADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIP 884 ADIA Y SK GR R T+++P ++ + + + ++ + ++ + S + Sbjct: 1125 ADIAMYRSKEAGRARYTMFDPIMHTQATQLLELETNLRL-ALEREEFIVYYQPIVS--LM 1181 Query: 885 EARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV----A 939 L +L W E +I F + L L V E +Q Sbjct: 1182 NRNLLGFEALVRWIHPEKGVISPANFIPVAEETGLIIPLGEWVLRESCRQMKAWQEQFIG 1241 Query: 940 SKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQKL--- 996 ++ + +S+ LS L L+N + L + L + L L I ++++ E V +L Sbjct: 1242 AENLRVSVNLSGKQLQQPNLINRIDNILTETGLEGKNLKLEITESMLMNNKEQVSELLLQ 1301 Query: 997 -RLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQR 1055 + ++ + G + L D L +D + + + ++ I A Sbjct: 1302 MKAKKIQVSIDDFGTGYSSLSYLHYLPVDTLKIDRSFVSRMSQVGENFEIVEAIITLAHH 1361 Query: 1056 LGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQ 1091 L M +A V + L +G + G + Sbjct: 1362 LQMDVVAEGVETEQHLRQLQQLGCEFGQGYFFSKPL 1397 Score = 177 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 96/466 (20%), Positives = 165/466 (35%), Gaps = 60/466 (12%) Query: 264 LMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQ 323 LMS + LL+ L I Y + + SE+ +R +E + + G Sbjct: 271 LMSGLLITTILLMSLWRYISLRPFYRLQQIEAALRASESRYRGIVEDQSEFICRYRPGGT 330 Query: 324 WLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNR 383 N+A C++ + + TF L + ED + Q + L + E + E R Sbjct: 331 LTFVNQAYCRYFQKTPAAVLDNTFWDLIYSEDQPQVAQNIASL-TPENPMITHEHRVRLS 389 Query: 384 NGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQ----------------- 426 +G++ W ++ + F A DI +LK+ E +Q Sbjct: 390 SGEIRWNQWTNRVIMDEKRNIIEFQAVGRDITQLKQVEAALRQLNEELEQRVEQRTAELA 449 Query: 427 -----------------------------LMERITLANEAGGIGIWEWELKPNIFSWDKR 457 ER+ LA E G IWEW L D Sbjct: 450 AEIRERQEIETALIKSQAKYEQLVEKLSKSEERLQLALEGSGDTIWEWNLGTGELYCDPN 509 Query: 458 MFELYEIPP-HIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPF-KLEFRITVKDGIRH 515 P N + W + PE E + + L ++ + LE++I +G Sbjct: 510 WIRRLGYDPREEAINIEWWRSKIDPETLSDHEAALENYLNGKTEYLALEYKIQTLEGEWL 569 Query: 516 IRALANRVLNKEGE--VERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDM 573 + + + + ++LG + D+TE KQ E L Q++E L ++ I + D Sbjct: 570 WIGGRGKCIAYDQQRKPLKILGTHRDITETKQTQENLRQQQELLKTIVEQIPVMLAYFDQ 629 Query: 574 AMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVV 633 + ++N EK+ GW+ E LL ++ I SA +D Sbjct: 630 HYNLLWVNREWEKIWGWSLENRQKGDLLAEFEPESEYRQSVLNYIKSA----QGKWRDFK 685 Query: 634 LHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLS 679 + R G + S + DG S+ + QD+TE +++ L Sbjct: 686 ILVRDGRI--IDTSWANVKLSDG---TSIAIGQDITERKRIEEILR 726 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 71/389 (18%), Positives = 149/389 (38%), Gaps = 16/389 (4%) Query: 295 KHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYS-QEELRGL-TFQQLTW 352 + +S+SE + A+E S + L + + LGY +EE + ++ Sbjct: 474 EKLSKSEERLQLALEGSGDTIWEWNLGTGELYCDPNWIRRLGYDPREEAINIEWWRSKID 533 Query: 353 PEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLV-RHTDGTPLYFIAQI 411 PE L+ +E ++G+ ++E + G+ +W + PL + Sbjct: 534 PETLSDHEAALENYLNGKTEYLALEYKIQTLEGEWLWIGGRGKCIAYDQQRKPLKILGTH 593 Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPN 471 DI E K+T++ +Q E + E + + ++ N+ ++ +++ + Sbjct: 594 RDITETKQTQENLRQQQELLKTIVEQIPVMLAYFDQHYNLLWVNREWEKIWGWSLENRQK 653 Query: 472 WQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVE 531 + E E + + + ++S +F+I V+DG R I V +G Sbjct: 654 GDLLAEF---EPESEYRQSVLNYIKSAQGKWRDFKILVRDG-RIIDTSWANVKLSDGT-- 707 Query: 532 RLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMA-MKITFMNPVAEKMSGW 590 + I D+TE K++ E L + +E+ + D+ + D+ +N + G+ Sbjct: 708 -SIAIGQDITERKRIEEILRESEEKYRLFFDANPNPLWVYDLETFAFLEVNQATIEHYGY 766 Query: 591 TQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITP 650 T+EE L + + + ++ PL+E +G DV + Sbjct: 767 TREEFLAMTIRDIRPP---EDVPLLEQYILQINPHFNRSGQWRHRKANGEIIDVEITSHG 823 Query: 651 LSTLDGSNIGSVLVIQDVTESRKMLRQLS 679 L +++ D+TE K + L Sbjct: 824 L--EYAGRKARLVLAHDITERLKAEKALQ 850 Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 65/351 (18%), Positives = 126/351 (35%), Gaps = 29/351 (8%) Query: 282 IMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTE-GQWLQTNKALCQFLGYSQE 340 + + + + + ESE +R + + + + E +L+ N+A + GY++E Sbjct: 710 AIGQDITERKRIEEILRESEEKYRLFFDANPNPLWVYDLETFAFLEVNQATIEHYGYTRE 769 Query: 341 ELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHT 400 E +T + + PED+ Q + ++ S + R+ NG+++ + + + Sbjct: 770 EFLAMTIRDIRPPEDVPLLEQYILQI--NPHFNRSGQWRHRKANGEIIDVEITSHGLEYA 827 Query: 401 DGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFE 460 +A DI E + E+ Q+ ER A + I I + E Sbjct: 828 GRKARLVLAH--DITERLKAEKALQESKERFHRAIVDAPLPILIHAEDGEIVQVNHAWTE 885 Query: 461 LYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQ-SRSPFKLEFRITVKDGIRHIRAL 519 L W E E + VI + + EF IT+K G I Sbjct: 886 LSGYHLDELSTIADWTEKAYGERKDIVRSVIDQLYEIDGKVEEGEFAITIKSGETRIWDF 945 Query: 520 ANRVLNKEGEVERL-LGINMDMTEVKQLNEALFQ-----------EKERLHITLDSIGE- 566 ++ L K + RL + + +D+TE KQ E L + L ++ + Sbjct: 946 SSAPLGKLADGRRLIISMAIDITERKQAEEQLRHSVLHDGLTGLPNRTLLLDRVEQAIKR 1005 Query: 567 ---------AVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITF 608 A++ ID+ + +N + G + + L + T Sbjct: 1006 KQQQPNYLFAILFIDLD-RFKVVNDSLGHLVGDQLLKTIADKLQRCVRPTD 1055 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 112/350 (32%), Gaps = 63/350 (18%) Query: 384 NGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIW 443 +G ++ +L +SL R+ P Y L++ E + R E I Sbjct: 273 SGLLITTILLMSLWRYISLRPFY---------RLQQIEAALRASESRYRGIVEDQSEFIC 323 Query: 444 EWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKL 503 + + ++ ++ P + W + + ED+ + I Sbjct: 324 RYRPGGTLTFVNQAYCRYFQKTPAAVLDNTFW-DLIYSEDQPQVAQNIASLTPENPMITH 382 Query: 504 EFRITVK-DGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQ---------- 552 E R+ + IR + +++++ + + D+T++KQ+ AL Q Sbjct: 383 EHRVRLSSGEIRWNQWTNRVIMDEKRNIIEFQAVGRDITQLKQVEAALRQLNEELEQRVE 442 Query: 553 ------------------------------------EKERLHITLDSIGEAVVCIDMAMK 576 +ERL + L+ G+ + ++ Sbjct: 443 QRTAELAAEIRERQEIETALIKSQAKYEQLVEKLSKSEERLQLALEGSGDTIWEWNLGTG 502 Query: 577 ITFMNPVAEKMSGWTQ-EEALGVPLL--TVLHITFGDNGPLMENIYSADTSRSAIEQDVV 633 + +P + G+ EEA+ + + T D+ +EN + T A+ + Sbjct: 503 ELYCDPNWIRRLGYDPREEAINIEWWRSKIDPETLSDHEAALENYLNGKTEYLAL--EYK 560 Query: 634 LHCRSGGSYDVHYSITPL-STLDGSNIGSVLVIQDVTESRKMLRQLSYSA 682 + G + + + + +D+TE+++ L Sbjct: 561 IQTLEGEWLWIGGRGKCIAYDQQRKPLKILGTHRDITETKQTQENLRQQQ 610 >UniRef50_C7RRQ6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RRQ6_9PROT Length = 1014 Score = 655 bits (1691), Expect = 0.0, Method: Composition-based stats. Identities = 196/698 (28%), Positives = 335/698 (47%), Gaps = 16/698 (2%) Query: 411 IEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKP 470 ++ + L ++ +Q + +A ++ + + I ++ + +++ P Sbjct: 311 VKLVERLLHAQREIEQQRAFLRAVIDANPHFVFVIDGQGTIRLANRSLAVSFDLTPAQMV 370 Query: 471 NWQVWYECVLPEDRQHAEKVIRDSLQS-RSPFKLEFRIT-VKDGIRHIRALANRVLNKEG 528 + P+ Q R L R + E R +R + ++N +G Sbjct: 371 GHALPDFVTDPDLLQTLRDDDRAILSGKRRRVEREIRFVDRAGVVRWFHTIKAPIVNGDG 430 Query: 529 EVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMS 588 EVE+L+G+ D++E K +ALF+ KER +TL SIG+AV+ D + + ++NPVAE ++ Sbjct: 431 EVEQLIGVCSDISERKLAEQALFEAKERALVTLHSIGDAVITTDASGHVDYLNPVAEALT 490 Query: 589 GWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRS---AIEQDVVLHCRSGGSYDVH 645 GWT EA G V I + + S + A+ +L R G YD+ Sbjct: 491 GWTTAEARGRSSGEVFPIVHDQTRRPVADPVSRCLQQGRIVALASHSLLVARDGQEYDID 550 Query: 646 YSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQ 705 S P+ D +G VLV ++VTE+R++ RQL++ A+HDALT L NR FE++L+ + Sbjct: 551 DSAAPIRGRDNQLLGVVLVFRNVTETRELARQLAHDATHDALTGLINRPEFERRLQRAVT 610 Query: 706 TVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEF 765 + RH L ++DLD+FK VND+AGHAAGD LL+++ +++ M R SD LAR+GGDEF Sbjct: 611 SARQDGARHVLCYLDLDQFKVVNDTAGHAAGDELLQQINTILAGMFRESDTLARIGGDEF 670 Query: 766 GLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQA 825 LL +C ++ A IA ++ V ++ F W+GR +++G S G+ I +++++A Sbjct: 671 ALLQENCPLDRAYAIAQSVVRNVREHRFNWQGRSYQIGVSIGLVPITAETQDTVQLLTEA 730 Query: 826 DIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWR-MIKENQLMMLAHGVASPRIP 884 DIACY +K GR RV VY+ + + + + R + + + + + + P Sbjct: 731 DIACYTAKELGRNRVHVYQRTDSESVQRHSEILGAAGLRDALDQGLFRLHYQPIVALQGP 790 Query: 885 EARNLWLISLKLWSCE------GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV 938 + R + +L + GE++ F + L A+DR V F++ A V Sbjct: 791 DFRTVRYEALLRVAHPGNTQRKGELVLPAAFIPAAERYNLMGAIDRWVIQAAFREYANGV 850 Query: 939 ASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH----AESVQ 994 G +++ LS LS +L+ + Q PP I A + + + Sbjct: 851 GLGGARLAINLSGNSLSDESLLAFIESQFVEHAFPPERACFEITETAAIQNLGPALGLMA 910 Query: 995 KLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQ 1054 L+ GC + L G L F+ LK DYL +DG ++ + D+ L+ I + Sbjct: 911 ALKGHGCHLALDDFGSGLSSFHYLKTLPVDYLKIDGSFVKDMCEDPRDDALVAAINQMSH 970 Query: 1055 RLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQP 1092 +G++T+A V + + L +GVD G P Sbjct: 971 AMGIQTVAEYVCSESIAERLCELGVDYAQGYFFGKPMP 1008 Score = 92.6 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 41/277 (14%), Positives = 94/277 (33%), Gaps = 6/277 (2%) Query: 286 VMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGL 345 ++ ++ I + R ++ + + ++ +G N++L + ++ G Sbjct: 313 LVERLLHAQREIEQQRAFLRAVIDANPHFVFVIDGQGTIRLANRSLAVSFDLTPAQMVGH 372 Query: 346 TFQQL-TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTP 404 T P+ L ++SG+ E R+ +R G V W + + + DG Sbjct: 373 ALPDFVTDPDLLQTLRDDDRAILSGKRRRVEREIRFVDRAGVVRWFHTIKAPIVNGDGEV 432 Query: 405 LYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI 464 I DI+E K EQ + ER + + G + + ++ + L Sbjct: 433 EQLIGVCSDISERKLAEQALFEAKERALVTLHSIGDAVITTDASGHVDYLNPVAEALTGW 492 Query: 465 PPHIKPNWQ--VWYECVLPEDRQHAEKVIRDSLQSRSPFKL---EFRITVKDGIRHIRAL 519 + V + R+ + LQ L + I Sbjct: 493 TTAEARGRSSGEVFPIVHDQTRRPVADPVSRCLQQGRIVALASHSLLVARDGQEYDIDDS 552 Query: 520 ANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKER 556 A + ++ ++ ++ + ++TE ++L L + Sbjct: 553 AAPIRGRDNQLLGVVLVFRNVTETRELARQLAHDATH 589 >UniRef50_Q1Q2M0 Putative uncharacterized protein n=2 Tax=Bacteria RepID=Q1Q2M0_9BACT Length = 1069 Score = 655 bits (1690), Expect = 0.0, Method: Composition-based stats. Identities = 189/869 (21%), Positives = 351/869 (40%), Gaps = 85/869 (9%) Query: 297 ISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTW-PED 355 + E+E F N G+ ++ G N A + GYS+EE++G + E Sbjct: 219 LEENELKFANLASVINDGIVVLNENGHVTHWNPAAEKIFGYSEEEMKGKNILNVIGGAEH 278 Query: 356 LNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDIN 415 +++ + +G I ++E +N L S G ++ IA DI+ Sbjct: 279 TEPEMRFFNNIKAGCIINETIEITGVKKNKSEFP--LEASFSTLQIGRQIHIIAIFRDIS 336 Query: 416 ELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFE------------LYE 463 E ++ + ++ + L NE + + + K+M +Y Sbjct: 337 ERRKKDDEKRKKQAILQLINEVFDTAHDLLTVDSTMRLYLKKMCRYLGWPVGHICKVIYT 396 Query: 464 IPPHIK-PNWQVWY----------------ECVLP-EDRQ-------------------- 485 + I+ + ++WY + P ED Sbjct: 397 VNGAIRLESTRLWYFENTKEFSLLRKIGENTILKPGEDLPGKVFSSRKMEWIPDVTKDSN 456 Query: 486 --HAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMD---- 539 A+ I S F I D I +I +R KE + + + +D Sbjct: 457 CIRAQHAIVKSAAIGVRGAFAFPIKEGDKILYIFEFFSR---KEEKPQAIFFEVVDNLAL 513 Query: 540 ----MTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEA 595 + E K+ +E + +L ++ +++ D I ++NP +++G+T +E Sbjct: 514 QLGRLIERKRADERI----RKLSQVVEQSPASILITDKEGIIEYVNPKLAELTGYTGDEI 569 Query: 596 LGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLD 655 +G + + + N+++ S + +++ ++G Y H I+P+ Sbjct: 570 IGRTPRMLK--SGKTSNETYRNLWNTIISGKEWQGELLNKKKTGELYWEHVHISPIRNHK 627 Query: 656 GSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHA 715 G + + +D+TE +K QL A+ D LT+L NR F+++L+ + A Sbjct: 628 GHVTNYLAIKEDITEHKKFETQLLNMATRDPLTNLFNRRRFQEELQYWIAQTLRYGATGA 687 Query: 716 LVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE 775 L+F+DLD FK VND+ GH AGD LL LA ++ S LR +D+ AR GGDEF +LLP + E Sbjct: 688 LLFLDLDNFKYVNDTLGHQAGDELLIRLAEMLRSRLRDTDIFARFGGDEFAILLPYTDRE 747 Query: 776 SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNG 835 A IA I+ ++ F +V S GI + ++ A ++ AD+A Y +K Sbjct: 748 KAGLIANEILELTREHTFEHS----KVTFSIGIVIFPEHGRDAETLLVNADLAMYRAKES 803 Query: 836 GRGRVTVYEPQQAAAHSERAAMSLDEQWR-MIKENQLMMLAHGVASPRIPEARNLWLISL 894 GR R V+ +Q A ++ +++ R + ++ ++ V + + L Sbjct: 804 GRNRFCVFSQEQKTHIE--AQINWEKRIRNALDNDRFVLHLQPVIDLS-NKNIIGYEALL 860 Query: 895 KLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV-ASKGISISLPLSVAG 953 ++ + E+I F L +DR V + AA+ + +GI + + LS Sbjct: 861 RMLGEKDELIFPAEFLSIAERFGLIRDIDRWVVCSAIRLAAEQQFSDRGIFLDINLSGKA 920 Query: 954 LSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRLAGCRIVLSQVG 1009 + L+ + Q S P + + A++++ + + L+ CR L G Sbjct: 921 FADTELLGIIKHQFNTSGTKPGSIVFEMTETAMMENMIAAQDFLAALKHMDCRFSLDDFG 980 Query: 1010 RDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPL 1069 FN L+ DYL +DG ++ N +D+ ++ I A L +T+A Sbjct: 981 SGFSSFNYLRHLTVDYLKIDGSFINDLPNNPVDQHMVKAIVELAHGLKKRTVAEFADSGD 1040 Query: 1070 VMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 + L +GV+ G I + + + N Sbjct: 1041 TLQLLRKLGVNYAQGNYIGKPRSVSEVFN 1069 Score = 93.0 bits (230), Expect = 7e-17, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 3/144 (2%) Query: 293 ERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTW 352 ERK E +E S + + EG N L + GY+ +E+ G T + L Sbjct: 520 ERKRADERIRKLSQVVEQSPASILITDKEGIIEYVNPKLAELTGYTGDEIIGRTPRMLKS 579 Query: 353 PEDLNKDLQQV-EKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 + N+ + + +ISG+ + E + G++ W + +S +R+ G ++A Sbjct: 580 GKTSNETYRNLWNTIISGK--EWQGELLNKKKTGELYWEHVHISPIRNHKGHVTNYLAIK 637 Query: 412 EDINELKRTEQVNQQLMERITLAN 435 EDI E K+ E + R L N Sbjct: 638 EDITEHKKFETQLLNMATRDPLTN 661 Score = 72.6 bits (177), Expect = 8e-11, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 61/168 (36%), Gaps = 23/168 (13%) Query: 504 EFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDS 563 E IR L ++L+ EGE L + + + Sbjct: 190 ETEFCRNYNEYLIRKLERQLLDSEGENIGL-----------------EENELKFANLASV 232 Query: 564 IGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVL--HITFGDNGPLMENIYSA 621 I + +V ++ +T NP AEK+ G+++EE G +L V+ NI + Sbjct: 233 INDGIVVLNENGHVTHWNPAAEKIFGYSEEEMKGKNILNVIGGAEHTEPEMRFFNNIKAG 292 Query: 622 DTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVT 669 I ++ ++ + + S + L G I + + +D++ Sbjct: 293 CIINETI--EITGVKKNKSEFPLEASFSTLQI--GRQIHIIAIFRDIS 336 >UniRef50_C1DD31 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DD31_LARHH Length = 910 Score = 655 bits (1689), Expect = 0.0, Method: Composition-based stats. Identities = 156/810 (19%), Positives = 313/810 (38%), Gaps = 33/810 (4%) Query: 301 ETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDL 360 E FR E+ G+ + G+ + N+ +G S+E + GL + P Sbjct: 101 EDRFRYCFEHLPFGLLVFDQTGRVMVCNRHFDTMMGLSEEAVHGLDLTAMPVP----GFS 156 Query: 361 QQVEKLISGEINTYSMEKRYYNRNGDVVWALLAV--SLVRHTDGTPLYFIAQIEDINELK 418 + V + ++G++ + E G + + +R G +A +ED + Sbjct: 157 RAVRQALAGDVGHFFGE---IPVAGGTRQLGVRAVFAPLRTPSGQVPRGVAILEDALDNP 213 Query: 419 RTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYEC 478 R + R L + + EW+ + W++ ++ ++ Sbjct: 214 RWQDELLAGRRRRQLFLDQSVLAAIEWDDGFCVQEWNRAAERMFGFSREEAIGQHAFF-- 271 Query: 479 VLP-EDRQHAEKVIRDSL--QSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLG 535 +LP E R ++ + SL Q + T + +++ G+ + Sbjct: 272 ILPSEVRATLDREVLQSLMRQEGGWHSVNVNQTRDGALIQCEWFNTTLVDSNGKSLGVTS 331 Query: 536 INMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEA 595 + +D+TE + + L + + E ++ D +I +N +++G+TQ E Sbjct: 332 LVLDITEKQAREDELRVAAQVY----EQSREGILITDAQHRIVMLNSRCCELTGYTQGEV 387 Query: 596 LGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLD 655 +G + + +E + + +++L R+G + ++ + Sbjct: 388 VGTTPEWMFSESQVSTPGFVE-LCRHLDEQGGWAGELLLRQRNGQLFLAWLTLRTVRL-- 444 Query: 656 GSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVN-STHQRH 714 G++ V + D+++ + R++ Y A D LT L NRA + + L+ V Sbjct: 445 GTSTYHVCMFGDLSDRQAAERRIQYLAYFDTLTGLPNRALLTDRANMALRGVEGDAAPAL 504 Query: 715 ALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNV 774 AL+ +D+D FK +ND+ GH+ GD LL+ +A + + +R D ++R GGDEF +LLPD N Sbjct: 505 ALLLLDIDHFKHINDTLGHSTGDQLLQSVAKRLQATVREGDTVSRQGGDEFVVLLPDANA 564 Query: 775 ESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKN 834 A +A I+ + + V S GI + D+ A + A+IA Y +K Sbjct: 565 SRAASVAQEILRRLG-FVCRIGEHDISVSVSIGIAMAPDDGTDFATLSKCAEIAMYRAKQ 623 Query: 835 GGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISL 894 GR + + P+ + ++ ++ + + + +L Sbjct: 624 EGRNTLRFFFPEMQERTLRHVQL-TGALRGAVERGEMQLHYQPQVDLQ--TGELSGVEAL 680 Query: 895 KLWSCEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS--KGISISLPLSV 951 W+ + F + L + V +Q A + + +++ LSV Sbjct: 681 LRWTHPLFGAVSPGEFIPLAEESGLIIPIGDWVLRTAARQLADWLRDGLPPMVMAVNLSV 740 Query: 952 AGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLSQ 1007 + L + L + +PP L + + + E ++ +L G ++ L Sbjct: 741 LQFNLPGLAQQIASILSEAGVPPALFEVELTESMAMTEPEAAIATIDELHSVGVQVSLDD 800 Query: 1008 VGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVL 1067 G LK D L +DG + + D ++ I G A+ LG+ T+A V Sbjct: 801 FGTGYSSLAYLKRFRLDRLKIDGSFVRDADSDPEDRAIVDAIVGMAESLGLATVAEGVET 860 Query: 1068 PLVMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 ++ + +G D + G I+ P LV Sbjct: 861 SGQLEVIRALGGDAVQGYWISRPLPAAGLV 890 Score = 99.6 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 59/373 (15%), Positives = 113/373 (30%), Gaps = 34/373 (9%) Query: 314 GMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINT 373 G+ + G+ L N A + RG D Q +S Sbjct: 12 GVWWLAASGEVLHANDAAARLT-------RGCY--------DHPAFGQLANMHLSSGSER 56 Query: 374 YSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITL 433 + VW + R DG + + + V +R Sbjct: 57 LAWMLPQAGGGEQTVWVQVD----RLPDG------SLMVHQLGTTSLDPVYCINEDRFRY 106 Query: 434 ANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRD 493 E G+ ++ + ++ + + + V + +R Sbjct: 107 CFEHLPFGLLVFDQTGRVMVCNRHFDTMMGLSEEAVHGLDLTAMPV-----PGFSRAVRQ 161 Query: 494 SLQSR-SPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQ 552 +L F E + +RA+ + G+V R + I D + + + L Sbjct: 162 ALAGDVGHFFGEIPVAGGTRQLGVRAVFAPLRTPSGQVPRGVAILEDALDNPRWQDELLA 221 Query: 553 EKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNG 612 + R + LD A + D + N AE+M G+++EEA+G + Sbjct: 222 GRRRRQLFLDQSVLAAIEWDDGFCVQEWNRAAERMFGFSREEAIGQH--AFFILPSEVRA 279 Query: 613 PLMENIYSAD-TSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTES 671 L + + V R G + T L +G ++G ++ D+TE Sbjct: 280 TLDREVLQSLMRQEGGWHSVNVNQTRDGALIQCEWFNTTLVDSNGKSLGVTSLVLDITEK 339 Query: 672 RKMLRQLSYSASH 684 + +L +A Sbjct: 340 QAREDELRVAAQV 352 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 62/178 (34%), Gaps = 5/178 (2%) Query: 259 TPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRN-AMEYSAIGMAL 317 R + W L+ + + K E E E S G+ + Sbjct: 303 QTRDGALIQCEWFNTTLVDSNGKSLGVTSLVLDITEKQAREDELRVAAQVYEQSREGILI 362 Query: 318 VGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLIS-GEINTYSM 376 + + + N C+ GY+Q E+ G T + + E VE E ++ Sbjct: 363 TDAQHRIVMLNSRCCELTGYTQGEVVGTTP-EWMFSESQVSTPGFVELCRHLDEQGGWAG 421 Query: 377 EKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLA 434 E RNG + A L + VR GT Y + D+++ + E+ Q L TL Sbjct: 422 ELLLRQRNGQLFLAWLTLRTVRL--GTSTYHVCMFGDLSDRQAAERRIQYLAYFDTLT 477 Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 54/422 (12%), Positives = 133/422 (31%), Gaps = 52/422 (12%) Query: 294 RKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWP 353 + + + ++ S + + N+A + G+S+EE G + Sbjct: 216 QDELLAGRRRRQLFLDQSVLAAIEWDDGFCVQEWNRAAERMFGFSREEAIGQHAFFILPS 275 Query: 354 EDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIED 413 E ++V + + + + R+G ++ + + ++G L + + D Sbjct: 276 EVRATLDREVLQSLMRQEGGWHSVNVNQTRDGALIQCEWFNTTLVDSNGKSLGVTSLVLD 335 Query: 414 INELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIP-PHIKPNW 472 I E + E + + E GI + + I + R EL + Sbjct: 336 ITEKQAREDELRVAAQ----VYEQSREGILITDAQHRIVMLNSRCCELTGYTQGEVVGTT 391 Query: 473 QVWY----ECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEG 528 W + P + L + + E + ++G + L R + G Sbjct: 392 PEWMFSESQVSTPGFVELCR-----HLDEQGGWAGELLLRQRNGQLFLAWLTLRTVRL-G 445 Query: 529 EVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAM------------- 575 + + D+++ + + TL + + D A Sbjct: 446 TSTYHVCMFGDLSDRQAAERRIQYL--AYFDTLTGLPNRALLTDRANMALRGVEGDAAPA 503 Query: 576 ---------KITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNG----PLMENIYSAD 622 +N +G +++ L + + + + A+ Sbjct: 504 LALLLLDIDHFKHINDTLGHSTGDQLLQSVAKRLQATVREGDTVSRQGGDEFVVLLPDAN 563 Query: 623 TSRSA-IEQDVVLH----CRSGGSYDVHYSIT---PLSTLDGSNIGSVLVIQDVTESRKM 674 SR+A + Q+++ CR G +D+ S++ ++ DG++ ++ ++ R Sbjct: 564 ASRAASVAQEILRRLGFVCRIGE-HDISVSVSIGIAMAPDDGTDFATLSKCAEIAMYRAK 622 Query: 675 LR 676 Sbjct: 623 QE 624 >UniRef50_C6CKZ2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Dickeya RepID=C6CKZ2_DICZE Length = 689 Score = 655 bits (1689), Expect = 0.0, Method: Composition-based stats. Identities = 145/682 (21%), Positives = 265/682 (38%), Gaps = 24/682 (3%) Query: 426 QLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPED-R 484 + +GI + + + +Y + V PE R Sbjct: 7 NSESLFQAILDRCPVGIAVINYDGHYVTVNPAYGAIYGYTQEEMAGRS--FTMVFPESAR 64 Query: 485 QHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVK 544 R L E+ + +DG+ + + G L +D+TE + Sbjct: 65 DSVLARHRQFLDEGGTLGGEWTVMRRDGVILTIWSESVPFAQHGHRADRLVYVLDITERQ 124 Query: 545 QLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVL 604 + E + + +S EA++ I+ + I +NP +++G++ + +G P Sbjct: 125 KAREQM----KIAAAVYESTQEAIIVINTSRSIISINPAFTRLTGYSAADVVGQPSYIFR 180 Query: 605 HITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLV 664 + + ++ ++ + G Y +I + G+ I V V Sbjct: 181 --SDRHDADFYTAMWRTVDEDGVWVGEMWDRKKDGSDYLKEITINVIKDAAGTPINYVGV 238 Query: 665 IQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRF 724 D+T+ +K + A++DA+T L NR F+ +L ++ + + AL+ IDLD F Sbjct: 239 FSDITQRKKQEALIWRQANYDAVTTLPNRHHFQDKLERAVEHAKQSGRPMALMLIDLDHF 298 Query: 725 KAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE-SARFIATR 783 K+VNDS GH AGDALL +++ + ++ +D +ARLGGDEF ++L D + + +A Sbjct: 299 KSVNDSLGHRAGDALLLAVSNRLTDCVQGADTIARLGGDEFAIILTDLHQNGDSGCLART 358 Query: 784 IISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVY 843 +++ + F +G V AS GI L +++ E+ AD A YA+K+ GR Y Sbjct: 359 LLAQLAQ-PFNIDGESMLVSASIGIALFPNDSDTLEELFKNADQAMYAAKSAGRNCFNYY 417 Query: 844 EPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCE-GE 902 P A R ++ D + I+ Q + + + + + +L W Sbjct: 418 TPALHQAARARLRLTNDLRT-AIQCGQFEVYYQPII--ELSTNKVVKAEALVRWRHPIRG 474 Query: 903 IIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVA--SKGISISLPLSVAGLSSATLV 960 +I F D L L V + Q A+ +++ S L S Sbjct: 475 MISPAEFIPLAEDTGLIVPLGDWVARQAITQLAQWRKIFDPHFQVAINQSPVQLRSKDFT 534 Query: 961 N-DLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRLAGCRIVLSQVGRDLQIF 1015 +++L L + + I +L+ +++ R G +I + G Sbjct: 535 EMTWVQELAQHGLEGNAVIIEITEGLLLNAESRVNDNLHLFRDTGIQIAIDDFGTGYSSL 594 Query: 1016 NSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLS 1075 L+ D L +D ++ + + L I A LG+K +A V DTL+ Sbjct: 595 AYLRKFDIDCLKIDRSFVEDL--DGVGFELCVAIIAMAHSLGLKVVAEGVETQQQCDTLA 652 Query: 1076 GIGVDLIYGEVIADAQPLDLLV 1097 IG D G + + P L Sbjct: 653 RIGCDYAQGFLFSRPVPAPELT 674 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 97/258 (37%), Gaps = 8/258 (3%) Query: 300 SETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKD 359 SE+ F+ ++ +G+A++ +G ++ N A GY+QEE+ G +F + +PE Sbjct: 8 SESLFQAILDRCPVGIAVINYDGHYVTVNPAYGAIYGYTQEEMAGRSFT-MVFPESARDS 66 Query: 360 LQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKR 419 + + E T E R+G V+ + + S+ G + + DI E ++ Sbjct: 67 VLARHRQFLDEGGTLGGEWTVMRRDG-VILTIWSESVPFAQHGHRADRLVYVLDITERQK 125 Query: 420 TEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECV 479 + M+ E+ I +I S + L + Sbjct: 126 AR----EQMKIAAAVYESTQEAIIVINTSRSIISINPAFTRLTGYSAADVVGQPSYIFRS 181 Query: 480 LPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA-NRVLNKEGEVERLLGINM 538 D + ++ + E KDG +++ + N + + G +G+ Sbjct: 182 DRHD-ADFYTAMWRTVDEDGVWVGEMWDRKKDGSDYLKEITINVIKDAAGTPINYVGVFS 240 Query: 539 DMTEVKQLNEALFQEKER 556 D+T+ K+ ++++ Sbjct: 241 DITQRKKQEALIWRQANY 258 Score = 70.7 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 24/134 (17%), Positives = 46/134 (34%), Gaps = 3/134 (2%) Query: 549 ALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITF 608 + + + LD + I+ +NP + G+TQEE G V + Sbjct: 4 SAWNSESLFQAILDRCPVGIAVINYDGHYVTVNPAYGAIYGYTQEEMAGRSFTMVFPESA 63 Query: 609 GDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDV 668 D+ ++ + + + R G + P + V V+ D+ Sbjct: 64 RDS--VLARHRQFLDEGGTLGGEWTVMRRDGVILTIWSESVPFAQHGHRADRLVYVL-DI 120 Query: 669 TESRKMLRQLSYSA 682 TE +K Q+ +A Sbjct: 121 TERQKAREQMKIAA 134 Score = 68.7 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 21/153 (13%), Positives = 51/153 (33%), Gaps = 1/153 (0%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 ER+ E E + + ++ T + N A + GYS ++ G Sbjct: 121 TERQKAREQMKIAAAVYESTQEAIIVINTSRSIISINPAFTRLTGYSAADVVGQPSYIFR 180 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 + + + E + E ++G + +++++ GTP+ ++ Sbjct: 181 SDRHDADFYTAMWRTVD-EDGVWVGEMWDRKKDGSDYLKEITINVIKDAAGTPINYVGVF 239 Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWE 444 DI + K+ E + + + + Sbjct: 240 SDITQRKKQEALIWRQANYDAVTTLPNRHHFQD 272 >UniRef50_Q2BL35 Sensory box/GGDEF/GAF/EAL domain protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BL35_9GAMM Length = 970 Score = 654 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 169/845 (20%), Positives = 323/845 (38%), Gaps = 78/845 (9%) Query: 315 MALVGTE-GQWLQTNKALCQFLGYSQEELRGLTFQQL--TWPEDLNKDLQ---------- 361 M L+ G+ + N A F GY + LR ++ QQ+ PE + ++ + Sbjct: 1 MLLIDPSSGKIIDANPAAATFYGYGRSTLRAMSIQQINTLTPEQVKEERKLAKSQGRNYF 60 Query: 362 -QVEKLISGEINTYSMEKRYYNRNGDVVWALL--AVSLVRHTDGTPLYF----------- 407 +L SG+I T +++ ++ +G + + ++ RH D ++ Sbjct: 61 IFRHELASGDIRTVAVQSNPFSFSGKTLLLSVINDITPGRHDDQALWHYQSRLEEMVDQQ 120 Query: 408 --------------------------IAQIEDINELKRTEQVNQQLMERITLANEAGGIG 441 + + I+ + + + +G Sbjct: 121 VREIEEVRQQKEWILWGGITLQAIIILGLVFSIHRGLKLRDELSSQRQSLRNIIWGTDVG 180 Query: 442 IWEWELKPNIFSWDKRMFELYEIP-PHIKP-NWQVWYECVLPEDRQHAEKVIRDSLQSRS 499 WEW ++ + R ++P + + W+ V P+D + + + + S Sbjct: 181 TWEWNVRTGEAHLNTRWAATLGYTLDELQPISIETWWMYVHPDDVERSREALHKHFSGES 240 Query: 500 P-FKLEFRITVKDGIRHIRALANRVL--NKEGEVERLLGINMDMTEVKQLNEALFQEKER 556 ++ E R+ K+G +V+ ++ G+ E + G + ++TE K +L Q Sbjct: 241 DAYQCEVRMRHKEGHWVWVLDRGKVVAWSESGKPEWVSGTHTEITEKKAAEGSLLQ---- 296 Query: 557 LHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLME 616 + E ++ D I N +++G+++ E +G + D+ E Sbjct: 297 AASVFEHANEGIMITDPEGTIQNANLAFSRITGYSRNEVIGQNPR-IFSSGHHDDQYFAE 355 Query: 617 NIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLR 676 ++ + + + ++ + G + +++ + +G + V + D+T +K + Sbjct: 356 -MWKSLSEKGNWTNEIWNRRKDGEIFAAIQTVSAIKDENGELLRYVSLFSDITALKKQQQ 414 Query: 677 QLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAG 736 QL A +DALT L NR +L+ + + A+ F DLD FK VND+ GH+ G Sbjct: 415 QLEKIAHYDALTGLPNRVLLSDRLQQAILQAKRHKRLLAVAFFDLDGFKEVNDTHGHSIG 474 Query: 737 DALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIW 795 D LL ELA LR D LARLGGDEF ++L D + E + + R++ A++ F+ Sbjct: 475 DKLLIELAERSKQALREGDSLARLGGDEFVVVLQDLHSSEESLPVLERLLKAISKPIFM- 533 Query: 796 EGRVHRVGASAGITLIDD-NNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSER 854 V AS GIT + A +++ QAD A Y +K G+ R +++ + + Sbjct: 534 NHTEICVSASIGITFYPQADEIDADQLIRQADQAMYVAKQSGKNRYHIFDTEHDRSVRGH 593 Query: 855 AAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRR-S 912 L + + + + R + + +L W E ++ F Sbjct: 594 HDQVL-RIHSALNNREFELYYQPKVNMR--TGQVVGAEALIRWNHPENGLVMPGDFLPVI 650 Query: 913 FSDPALSHALDRRVFHEFFQQAAKA-VASKGISISLPLSVAGLSSATLVNDLLEQLENS- 970 D L + V + Q + + +S+ + L V+ L + L Sbjct: 651 AGDAGLVVEVGDWVLEQAMTQIDQWHQQGLDVPVSVNVDALHLQLPDFVDRLQQMLAAHP 710 Query: 971 PLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYL 1026 + P L L + + L+ + + R G L G LK A L Sbjct: 711 GVLPGDLELEVLETSALNDINRVSTIINECRDIGISFALDDFGTGYSSLTYLKQLPAHLL 770 Query: 1027 LLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEV 1086 +D ++ +L D ++ + G A +TIA V + L +G +L G V Sbjct: 771 KIDRSFVCDMLDDLEDLSILEGVLGLANAFRCQTIAEGVESVAQGEMLLMMGCELAQGYV 830 Query: 1087 IADAQ 1091 IA Sbjct: 831 IAKPM 835 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 68/382 (17%), Positives = 131/382 (34%), Gaps = 17/382 (4%) Query: 269 PWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTN 328 W L + + ++ R +S RN + + +G N Sbjct: 135 LWGGITLQAIIILGLVFSIHRGLKLRDELSSQRQSLRNIIWGTDVGTWEWNVRTGEAHLN 194 Query: 329 KALCQFLGYSQEELRGL---TFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNG 385 LGY+ +EL+ + T+ P+D+ + + + K SGE + Y E R ++ G Sbjct: 195 TRWAATLGYTLDELQPISIETWWMYVHPDDVERSREALHKHFSGESDAYQCEVRMRHKEG 254 Query: 386 DVVWALLAVSLV-RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWE 444 VW L +V G P + +I E K E Q E GI Sbjct: 255 HWVWVLDRGKVVAWSESGKPEWVSGTHTEITEKKAAEGSLLQAAS----VFEHANEGIMI 310 Query: 445 WELKPNIFSWDKRMFELYEIPP-HIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKL 503 + + I + + + + + +D+ AE + SL + + Sbjct: 311 TDPEGTIQNANLAFSRITGYSRNEVIGQNPRIFSSGHHDDQYFAE--MWKSLSEKGNWTN 368 Query: 504 EFRITVKDGIRHIRAL-ANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLD 562 E KDG + + ++ GE+ R + + D+T +K+ + L + L Sbjct: 369 EIWNRRKDGEIFAAIQTVSAIKDENGELLRYVSLFSDITALKKQQQQLEKIAHY--DALT 426 Query: 563 SIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSAD 622 + V+ D + +++ + G + H + L+E A+ Sbjct: 427 GLPNRVLLSDRLQQAILQAKRHKRLLAVAFFDLDGFKEVNDTHGHSIGDKLLIE---LAE 483 Query: 623 TSRSAIEQDVVLHCRSGGSYDV 644 S+ A+ + L G + V Sbjct: 484 RSKQALREGDSLARLGGDEFVV 505 >UniRef50_A6F7G4 PAS sensor diguanylate cyclase and phophodiesterase n=2 Tax=Moritella sp. PE36 RepID=A6F7G4_9GAMM Length = 911 Score = 654 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 163/695 (23%), Positives = 309/695 (44%), Gaps = 18/695 (2%) Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPN 471 + +++ + Q +++ E +GI+ + + ++ ++ + Sbjct: 222 QLRDKVAQRTAELVQSEAKLSSIFEHSPVGIFHYNKHGVLLRTNRHFEDIIGADKNGLIG 281 Query: 472 WQVWYECVLPEDRQHAEKVIRDSLQSR-SPFKLEFRITVKDGIRHIRALANRVLNKEGEV 530 + + + + K I+ SL+ + S F+ E+ ++ + + GE+ Sbjct: 282 FNMLKKV----QNANLSKAIKSSLKGQVSTFEGEYISVSHRKKSYLEVDLVPLYSNTGEI 337 Query: 531 ERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGW 590 + +G+ D+T L + ++L ++ + ++ + I ++NP +++G+ Sbjct: 338 DGGVGVCDDIT----LQQQNTANLKKLSRVVECSLDGIMITNTQGVIEYVNPSFTQITGY 393 Query: 591 TQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITP 650 + E++G T ++++ ++ +V ++G Y +I P Sbjct: 394 SSTESVGEKSNFFRSTTT--TNATYNELWNSISNGDEWSDEVQNQHKNGDLYWAKVTIIP 451 Query: 651 LSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNST 710 ++ G + + D+T+SR + +Q++Y A HD LT L NR FE QL + +V + Sbjct: 452 MTNACGEITHFIGIQVDITKSRIISKQIAYQAKHDMLTGLINRYEFEHQLSDAVCSVQGS 511 Query: 711 HQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLP 770 H L F+DLD+FK +ND+ GHAAGD LLR++A L+ L+ +D LARLGGDEF +L+ Sbjct: 512 QLTHVLCFLDLDQFKIINDTCGHAAGDELLRQIAGLIGDNLKPNDTLARLGGDEFAVLMR 571 Query: 771 DCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACY 830 DC + A A I+ V + FIW+ VG S G+ I + + +EV+ AD+ACY Sbjct: 572 DCQLTEAVVAANEILDKVKKFQFIWKKSCFSVGVSIGVAEICNTSGNTSEVLIHADLACY 631 Query: 831 ASKNGGRGRVTVYEPQQAAAHSERAAMSL-DEQWRMIKENQLMMLAHGVASPRIPEARNL 889 A+K+ GR RV Y + +E + E++ + A + + + + + Sbjct: 632 AAKDLGRNRVHTYHDNDELLTARDDEFRWVNEIKEALNEDRFELYAQPIVALQDTAQKPI 691 Query: 890 WLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGIS--ISL 947 + + L++ G +I F LS +DR V Q + IS+ Sbjct: 692 FEVLLRMQDKNGALISPGVFLPIAERYNLSEPIDRWVIDRTLQWMKAHSQQLDMFDHISI 751 Query: 948 PLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRI 1003 LS A L + L+ ++ + + + P+ + I A + + S + L GC+ Sbjct: 752 NLSGASLGDSDLLQHIMTTITQAKVSPQQIMFEITETAAISNLASATIFINTLSTFGCQF 811 Query: 1004 VLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAG 1063 L G L F LK + L +DG ++ N +D ++ I + +KTIA Sbjct: 812 ALDDFGSGLSSFAYLKNLPVNTLKIDGIFIKDILTNPIDAAMVKSINEIGHLMKLKTIAE 871 Query: 1064 PVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 V + + IG+D G I QP+D ++ Sbjct: 872 FVENDAIKQKVETIGIDFAQGYGIGKPQPIDKMLT 906 Score = 81.5 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 40/302 (13%), Positives = 111/302 (36%), Gaps = 19/302 (6%) Query: 261 RTYLMSHMPWLPFLLILLPANIMTMVMYAFRAER-KHISESETHFRNAMEYSAIGMALVG 319 + + +L F++ + + A+R + +SE + E+S +G+ Sbjct: 197 ISAMFMLTVFLLFVMQTVSYRQQVKQLRDKVAQRTAELVQSEAKLSSIFEHSPVGIFHYN 256 Query: 320 TEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKR 379 G L+TN+ +G + L G + +L+K ++ + G+++T+ E Sbjct: 257 KHGVLLRTNRHFEDIIGADKNGLIGFNMLKKVQNANLSK---AIKSSLKGQVSTFEGEYI 313 Query: 380 ---YYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANE 436 + ++ + + + + G + +DI +Q N +++++ E Sbjct: 314 SVSHRKKS----YLEVDLVPLYSNTGEIDGGVGVCDDIT----LQQQNTANLKKLSRVVE 365 Query: 437 AGGIGIWEWELKPNIFSWDKRMFELYEIPP-HIKPNWQVWYECVLPEDRQHAEKVIRDSL 495 GI + I + ++ ++ + +S+ Sbjct: 366 CSLDGIMITNTQGVIEYVNPSFTQITGYSSTESVGEKSNFFRSTTT--TNATYNELWNSI 423 Query: 496 QSRSPFKLEFRITVKD-GIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEK 554 + + E + K+ + + + N GE+ +GI +D+T+ + +++ + + Sbjct: 424 SNGDEWSDEVQNQHKNGDLYWAKVTIIPMTNACGEITHFIGIQVDITKSRIISKQIAYQA 483 Query: 555 ER 556 + Sbjct: 484 KH 485 >UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9X9_TOLAT Length = 1101 Score = 654 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 151/743 (20%), Positives = 283/743 (38%), Gaps = 28/743 (3%) Query: 373 TYSMEKRYYNRNGDVVWALLA-----VSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQL 427 YS ++ ++A L ++LV G + F+ + + + Q+ Sbjct: 355 RYSGWHILVQQDRAEIYAPLHNLVYWITLVVFFAGLLVIFVVSLLWRQQQYTNQLELQRQ 414 Query: 428 MER----ITLANEAGGIGIWEWELKPN-IFSWDKRMFELYEIPPHIKPNWQVWYECVLPE 482 + E G+ + ++ ++ +L + Sbjct: 415 TSEKDRLLKHFFELPLFGMAITHGQTGHWIRFNHQLSDLLGYSHSEMAEHTLLSLTANEY 474 Query: 483 DRQHAEKVIRDSLQSRSPFKLEFRITVKD-GIRHIRALANRVLNKEGEVERLLGINMDMT 541 + + + + E ++ KD + ++ V + + ++ + D++ Sbjct: 475 QEADIAAMYQMTQDLCDGYLCEKQLRRKDGQLIYVNVDTRCVRTADRNIAFIISVIEDIS 534 Query: 542 EVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLL 601 K+ L Q D+ E ++ D +I +NP ++ G++Q E G Sbjct: 535 SQKENEAILRQS----ATVFDNTREGIMITDKNAQIIRVNPAFAELFGFSQHELQGKTP- 589 Query: 602 TVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGS 661 V+ + ++I + + + ++ + + SI+ + Sbjct: 590 -VIFKSGKHTHEFYQHIRDSLNTSAFWRGEIWNRRKDNHIIPLICSISAVRNDKQQLTHY 648 Query: 662 VLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDL 721 V V D+++ + +L++ A HD LT L NR L + H R AL+ +DL Sbjct: 649 VSVYSDISKLKASEAKLAHLAHHDPLTQLPNRTLLTINLSHAIDLAVRNHHRIALLMLDL 708 Query: 722 DRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLP-DCNVESARFI 780 DRFK VNDS GH GDALL+E+A + +R SD + RLGGDEF +L+ + + Sbjct: 709 DRFKDVNDSFGHQIGDALLQEVARRLRRRVRISDTICRLGGDEFTVLIEGNPALHDVEHF 768 Query: 781 ATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRV 840 A I+ + D + GR +GAS GI+L ++ E++ QAD A Y +K GR Sbjct: 769 AEDILQLLKDPFSLPNGREVIIGASIGISLYPEHGQTPKELLQQADAAMYRAKAHGRSCF 828 Query: 841 TVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SC 899 + + A +R + + Q R ++ N+L + I R + +L W Sbjct: 829 RYFSDELTRAAEQRLDLEVRLQ-RALRLNELCLYFQPQID--ISSNRIIGAEALVRWQDP 885 Query: 900 EGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV--ASKGISISLPLSVAGLSSA 957 +I F + L L V E +Q + I++++ +S ++ Sbjct: 886 AHGLISPAQFIPVAEETGLIKQLGEWVLLEACRQGKEWQQKGLPAINLAVNISPVQFRNS 945 Query: 958 TLVNDLLEQLENSPLPPRLLHLIIPAEAILDH----AESVQKLRLAGCRIVLSQVGRDLQ 1013 ++ + L+ + P LL L + A++ H E + LR G R+ + G Sbjct: 946 NILESVFNALKQTGYPASLLELELTESALMTHENEAVEILSALRKYGIRLAIDDFGTGYS 1005 Query: 1014 IFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDT 1073 LK D L +D ++ D + I A L +K +A V + Sbjct: 1006 SLAYLKRFPLDVLKIDKSFVDDIPHKKDDMEIAAAIVAMAHTLRLKVLAEGVETEEQLTF 1065 Query: 1074 LSGIGVDLIYGEVIADAQPLDLL 1096 L G D G +++ P D Sbjct: 1066 LKEQGCDCYQGYLMSPPVPADQF 1088 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 87/484 (17%), Positives = 169/484 (34%), Gaps = 49/484 (10%) Query: 263 YLMSHMPWLPFLLILLPANIM--TMVMYAFRAERKHISESETHFRNAMEYSAIGMALV-G 319 Y ++ + + LL++ +++ ++ SE + ++ E GMA+ G Sbjct: 379 YWITLVVFFAGLLVIFVVSLLWRQQQYTNQLELQRQTSEKDRLLKHFFELPLFGMAITHG 438 Query: 320 TEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKR 379 G W++ N L LGYS E+ T LT E D+ + ++ + Y EK+ Sbjct: 439 QTGHWIRFNHQLSDLLGYSHSEMAEHTLLSLTANEYQEADIAAMYQMTQDLCDGYLCEKQ 498 Query: 380 YYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGG 439 ++G +++ + VR D + I+ IEDI+ K E + +Q + Sbjct: 499 LRRKDGQLIYVNVDTRCVRTADRNIAFIISVIEDISSQKENEAILRQSAT----VFDNTR 554 Query: 440 IGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQ--VWYECVLPEDRQHAEKVIRDSLQS 497 GI + I + EL+ H ++ + + IRDSL + Sbjct: 555 EGIMITDKNAQIIRVNPAFAELFGFSQHELQGKTPVIFKSGKHTHE---FYQHIRDSLNT 611 Query: 498 RSPFKLEFRITVKDGIRH-IRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKER 556 + ++ E KD + + V N + ++ + + D++++K L Sbjct: 612 SAFWRGEIWNRRKDNHIIPLICSISAVRNDKQQLTHYVSVYSDISKLKASEAKLAHLAHH 671 Query: 557 -----------LHITLDSIGE---------AVVCIDMAMKITFMNPVAEKMSGWTQEEAL 596 L I L + A++ +D+ + +N G + + Sbjct: 672 DPLTQLPNRTLLTINLSHAIDLAVRNHHRIALLMLDLD-RFKDVNDSFGHQIGDALLQEV 730 Query: 597 GVPLLTVLHITF------GDNGPLMENIYSADTSRSAIEQDVVLHCRS------GGSYDV 644 L + I+ GD ++ A +D++ + G + Sbjct: 731 ARRLRRRVRISDTICRLGGDEFTVLIEGNPALHDVEHFAEDILQLLKDPFSLPNGREVII 790 Query: 645 HYSI-TPLSTLDGSNIGSVLVIQDVTE-SRKMLRQLSYSASHDALTHLA-NRASFEKQLR 701 SI L G +L D K + + D LT A R E +L+ Sbjct: 791 GASIGISLYPEHGQTPKELLQQADAAMYRAKAHGRSCFRYFSDELTRAAEQRLDLEVRLQ 850 Query: 702 ILLQ 705 L+ Sbjct: 851 RALR 854 >UniRef50_Q60BD0 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q60BD0_METCA Length = 1214 Score = 654 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 176/902 (19%), Positives = 330/902 (36%), Gaps = 66/902 (7%) Query: 217 TFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLI 276 F + L A R + + + ++L++A R L WL Sbjct: 350 IFAALGLEIDAAV--RRDRVAAYRVVAIAIALLIAMGTLGFEVSRQRL-----WLS---- 398 Query: 277 LLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLG 336 +AER+ ++E++ + +G + + ++ + G Sbjct: 399 ----------SRIAKAERRRLAEAQRL-------ARVGSWVYDPATDRMTWSEETYRIFG 441 Query: 337 YSQEELRGLTFQQLTW---PEDLNKDLQQVEKLISGEINTYSMEK--RYYNRNGDVVWAL 391 + +Q+ PED + G + +E+ +G V Sbjct: 442 LPFDGEVPHRYQEFAALFVPEDRELIEAALRG---GRDDLLGVERPLCVRRADGAVRQVN 498 Query: 392 LAVSLV-RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPN 450 V L R D P+ ++D+ E E+ +Q ER+ L E + + EW+L Sbjct: 499 FKVELQGRRGDSGPV-LQGTLQDVTERWEAERALRQSEERLRLHVEHLPLAVIEWDLDFI 557 Query: 451 IFSWDKRMFELYEIPPHIKPNWQVWYECVLPED-RQHAEKVIRDSLQSRSPFKLEFRITV 509 + W+ ++ + PED + AE + R+ + +T Sbjct: 558 VSRWNPAAERIFGYGADRMIGRSA--GILFPEDVLEQAEAIWREVSGGSGNRVVTANVTA 615 Query: 510 KDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVV 569 + +G V + + D+T + + L EA++ Sbjct: 616 DGRTIRCEWYNTPLTTPDGTVIGVASLVDDITRREAVEAELRLAATTFE-----TDEAIL 670 Query: 570 CIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIE 629 +I +N +++G+ QE+ +G G ++ + + Sbjct: 671 IAGADGRILRVNAAFSRITGYRQEDVVGRNPRLFKSGLHG--AEFYREVWRSLEQTGRWQ 728 Query: 630 QDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTH 689 ++ ++G Y +IT + + +G V + D++E ++ ++ A +D+LT Sbjct: 729 GEIWNRRKNGEVYPERKTITAVRSANGDITHYVAISSDISELKRTEEKIRQLAYYDSLTG 788 Query: 690 LANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLS 749 L NR+ ++L ++ AL+F+DLD FK +NDS GH GD LL ++A + + Sbjct: 789 LPNRSLIFERLTQQMKAARREGTYGALLFMDLDYFKTLNDSLGHHMGDRLLVQVAERLKN 848 Query: 750 MLRSSDVLARLGGDEFGLLL----PDCNVESARFI--ATRIISAVNDYHFIWEGRVHRVG 803 L + ARLGGDEF +LL P +V + + I A R+ ++ F + VH + Sbjct: 849 CLEDEEAAARLGGDEFVVLLAPAKPSASVAAGQAIVHARRVRELLSA-PFQLDDYVHYIS 907 Query: 804 ASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQW 863 S GI L D + A +V+ QAD A Y +KN GR V YE A R + + Sbjct: 908 VSIGIALFPDGANTAEDVLKQADTAMYVAKNEGRDGVRFYESAMEAVVRGRLELEKALR- 966 Query: 864 RMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHAL 922 + + ++ + + + R + +L W E I F + + Sbjct: 967 KALANDEFEVYYQPQM---LGDGRVVGAEALIRWFHPERGAISPDQFIPVCEQNGMILRV 1023 Query: 923 DRRVFHEFFQQAA--KAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLI 980 V A +A +S+ +S + L+ L + + + P L L Sbjct: 1024 GAIVLRRACACLAEIRARGLALPKLSVNVSPRQFMRSDLMTQLEQFCLENGVSPTDLCLE 1083 Query: 981 IPAEAILDHAE----SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANV 1036 + +L+H E + +L+ G + G LK D L + ++ Sbjct: 1084 LTEGVLLNHTELAVAQIGRLKNLGVSFSIDDFGTGYSSLAYLKHLPLDDLKIASAFVRDL 1143 Query: 1037 QGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 + + D ++ I A+ LG+ IA V ++ L G G A P D Sbjct: 1144 EQDSSDAAIVETIVSMARHLGLDVIAEGVETRTQVEILERYGCHRFQGNYFARPLPKDDF 1203 Query: 1097 VN 1098 + Sbjct: 1204 IR 1205 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 86/543 (15%), Positives = 174/543 (32%), Gaps = 71/543 (13%) Query: 186 RNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFLTTVMM 245 P L L + + L + LP P + L L+ + +V++ Sbjct: 147 TAPLLRALCALAMGAGIWLHYRRSGELPVPAEELSSGL--------GFGVRLVLVASVVL 198 Query: 246 VSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFR 305 + + + A R+ L + A+I + R + E E H Sbjct: 199 GAAFVLTELFGHAADRSVRRE----LSIQAETVAASINPEWIRQVRTGATEVREREEH-- 252 Query: 306 NAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEE-----LRGLTFQQLTWPED--LNK 358 L+ + + L E G + + P + + Sbjct: 253 ----------WLISQLLRIDAADPKLKGLYLLIPAEGGAMRAIGSSAGDIEPPRNGVEGR 302 Query: 359 DLQQVEKLISGEINTYSMEKRYY-NRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINEL 417 E + S R +GD + A + VR T+ ++ +E + Sbjct: 303 GWPNTEHAEAVAGVFTSGRSRVLGLAHGDGKDTVSAFAPVRDTETGEIFAALGLEIDAAV 362 Query: 418 KRTEQVNQQ---------------------------------LMERITLANEAGGIGIWE 444 +R + R+ A +G W Sbjct: 363 RRDRVAAYRVVAIAIALLIAMGTLGFEVSRQRLWLSSRIAKAERRRLAEAQRLARVGSWV 422 Query: 445 WELKPNIFSWDKRMFELYEIP--PHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFK 502 ++ + +W + + ++ +P + +Q + +PEDR+ E +R + Sbjct: 423 YDPATDRMTWSEETYRIFGLPFDGEVPHRYQEFAALFVPEDRELIEAALRGGRDDLLGVE 482 Query: 503 LEFRITVKD-GIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITL 561 + D +R + + L G D+TE + AL Q +ERL + + Sbjct: 483 RPLCVRRADGAVRQVNFKVELQGRRGDSGPVLQGTLQDVTERWEAERALRQSEERLRLHV 542 Query: 562 DSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSA 621 + + AV+ D+ ++ NP AE++ G+ + +G + + E I+ Sbjct: 543 EHLPLAVIEWDLDFIVSRWNPAAERIFGYGADRMIGRSAGILFPEDVLEQA---EAIWRE 599 Query: 622 DTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYS 681 + S G + + TPL+T DG+ IG ++ D+T + +L + Sbjct: 600 VSGGSGNRVVTANVTADGRTIRCEWYNTPLTTPDGTVIGVASLVDDITRREAVEAELRLA 659 Query: 682 ASH 684 A+ Sbjct: 660 ATT 662 >UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q47ES6_DECAR Length = 832 Score = 654 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 171/822 (20%), Positives = 312/822 (37%), Gaps = 36/822 (4%) Query: 306 NAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEK 365 ++ A + G ++ N+ LG E+ G +L E + +K Sbjct: 17 ALLDKLATPVFAKNLNGLYIYANEMAGIMLGRPAPEILGRKDSELFASELAGRMQTCDDK 76 Query: 366 LI-SGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVN 424 L+ SGE + + G+ + L+ ++R G + + DI + KR E Sbjct: 77 LLASGESASCEIWLPDRGHGGERCYWLVR-KVLRDKKGQIVGLASVATDITDRKRQELEL 135 Query: 425 QQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDR 484 L + +A ++E +++ + +L P V +E + P+ Sbjct: 136 IALKNKFAATLQALPDLMFELDIEGQFLDCHAQQSKLLVGSPSDMVGKTV-HEVLPPDVA 194 Query: 485 QHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVK 544 + + ++++ +F++ + +G R + + + ++ D+T+ K Sbjct: 195 AIFIQSLHEAMEQGISTGSQFQLDLPEGSRRFELSVAQKASDGDHQPHFIVLSRDITDRK 254 Query: 545 QLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVL 604 AL + + + +D+ D+ + N + + G LG Sbjct: 255 NAEHALRESESLMRAIVDNTPVEYWARDLEGRCIMENALVVEHWG----SLLGKRPED-- 308 Query: 605 HITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLV 664 D + + IE +V G + + + P+ +DG IG V Sbjct: 309 SGVSPDELAVWQENNRRVYEGEVIEAEVEYQV-GGQTRIFNNVVAPIK-VDGQTIGIVGF 366 Query: 665 IQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRF 724 QD+T+ ++ ++ A +D+LTHL NR +L L AL+ IDLD F Sbjct: 367 NQDITDRKRNEEEIHRLAFYDSLTHLPNRRLMFDRLEHALIGSARRKSHGALLLIDLDNF 426 Query: 725 KAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE-----SARF 779 K +ND+ GH GD LL E+A + + +R D ARLGGDEF ++L D + A Sbjct: 427 KFLNDTHGHEVGDELLLEVAKRLKTCIRQGDTAARLGGDEFVVILEDIDGAGNGTIQAEL 486 Query: 780 IATRIISAVNDYHFIWE-----GRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKN 834 IA I + +N + +R +S GI L DD A E++ +AD A Y +K Sbjct: 487 IAGHIQAQLNHPFSLVRPPERLSIDYRCASSIGIALFDDTMVTAKELLRRADTAMYQAKA 546 Query: 835 GGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISL 894 GR + ++P+ AA + RAA+ + + + I E Q + R +L Sbjct: 547 AGRNTLRFFDPEMQAAVTHRAALETELR-KAIDEQQFHLCFQVQMD---QSGRPTGGEAL 602 Query: 895 KLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA---VASKGISISLPLS 950 W I +F + L + + V +Q A + G+++++ +S Sbjct: 603 LRWEHPTRGTIPPASFIPLAEETGLIVPIGQWVLATACRQLAAWSQQPETSGLTLAVNVS 662 Query: 951 VAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESV----QKLRLAGCRIVLS 1006 A + L + L + P L L + +L+ E++ +L+ G R L Sbjct: 663 ARQFRQARFTDQLRDLLLQTGAPATRLKLELTESMMLEDTEAIIGRMAELKQLGIRFSLD 722 Query: 1007 QVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVV 1066 G LK + L +D +V + D + I LG++ IA V Sbjct: 723 DFGTGYSSLAYLKRLPLNQLKIDQSFVRDVLTDPNDAAIAETIVALGNILGLEVIAEGVE 782 Query: 1067 LPLVMDTLSGIGVDLIYGEVIADAQPL---DLLVNSSYFAIN 1105 L+ +G G + PL + + N Sbjct: 783 TDAQWRFLANVGCKNYQGYLFGRPLPLLEFEQFLQGCDAGAN 824 Score = 81.5 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 42/274 (15%), Positives = 95/274 (34%), Gaps = 16/274 (5%) Query: 283 MTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEEL 342 + + + + + + F ++ M + EGQ+L + + L S ++ Sbjct: 121 VATDITDRKRQELELIALKNKFAATLQALPDLMFELDIEGQFLDCHAQQSKLLVGSPSDM 180 Query: 343 RGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDG 402 G T ++ P+ +Q + + + I+T S + + G + L D Sbjct: 181 VGKTVHEVLPPDVAAIFIQSLHEAMEQGISTGS-QFQLDLPEGSRRFELSVAQKASDGDH 239 Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWD----KRM 458 P +FI DI + K E ++ + + + W +L+ + + Sbjct: 240 QP-HFIVLSRDITDRKNAEHALRESESLMRAIVDNTPVEYWARDLEGRCIMENALVVEHW 298 Query: 459 FELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRA 518 L P V P++ ++ R + + E V R Sbjct: 299 GSLLGKRPEDSG--------VSPDELAVWQENNRRVYEG-EVIEAEVEYQVGGQTRIFNN 349 Query: 519 LANRVLNKEGEVERLLGINMDMTEVKQLNEALFQ 552 + + +G+ ++G N D+T+ K+ E + + Sbjct: 350 VVAPIK-VDGQTIGIVGFNQDITDRKRNEEEIHR 382 Score = 55.7 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 41/132 (31%), Gaps = 3/132 (2%) Query: 548 EALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHIT 607 E LD + V ++ + N +A M G E LG + Sbjct: 6 EMTTDGVVTHEALLDKLATPVFAKNLNGLYIYANEMAGIMLGRPAPEILGRKDSELFASE 65 Query: 608 FGDNGPLMENIYSADTSRSAIEQDVVLHCR-SGGSYDVHYSITPLSTLDGSNIGSVLVIQ 666 ++ A ++ ++ L R GG L G +G V Sbjct: 66 LAGRMQTCDDKLLASGESASC--EIWLPDRGHGGERCYWLVRKVLRDKKGQIVGLASVAT 123 Query: 667 DVTESRKMLRQL 678 D+T+ ++ +L Sbjct: 124 DITDRKRQELEL 135 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 26/164 (15%), Positives = 64/164 (39%), Gaps = 9/164 (5%) Query: 282 IMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEE 341 +++ + + + ESE+ R ++ + + EG+ + N + + G Sbjct: 245 VLSRDITDRKNAEHALRESESLMRAIVDNTPVEYWARDLEGRCIMENALVVEHWG----S 300 Query: 342 LRGLTFQQ-LTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHT 400 L G + P++L + ++ GE+ +E + G V+ ++ Sbjct: 301 LLGKRPEDSGVSPDELAVWQENNRRVYEGEVIEAEVEYQV---GGQTRIFNNVVAPIKV- 356 Query: 401 DGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWE 444 DG + + +DI + KR E+ +L +L + +++ Sbjct: 357 DGQTIGIVGFNQDITDRKRNEEEIHRLAFYDSLTHLPNRRLMFD 400 >UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4K931_THASP Length = 855 Score = 653 bits (1686), Expect = 0.0, Method: Composition-based stats. Identities = 136/618 (22%), Positives = 252/618 (40%), Gaps = 31/618 (5%) Query: 505 FRITVKDGIRHIRALANRVLNKEGEVERLLG---------------INMDMTEVKQLNEA 549 +R+ + RHIR + VL+ EGE+ L+ ++ + A Sbjct: 241 YRVRMLLAERHIRHIG--VLDGEGELVDLVSFKDILSGMELAYVHELHDALRARDLALSA 298 Query: 550 LFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFG 609 ++ ++S E V+ D +I +NP +M+G+ EE +G+ + + Sbjct: 299 SQRDLYLAEKVIESSLEGVMVTDAHARILSVNPAFTRMTGYAPEEVVGLNPSVL--NSGR 356 Query: 610 DNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVT 669 + ++ + +V ++G Y IT + +G + D++ Sbjct: 357 QSPAFYARMWDGLLGDGQWQGEVWNRRKTGEVYPQLLHITAIRDREGVLTHYAALFTDIS 416 Query: 670 ESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVND 729 ++ ++ A +D LT L NR + +L++ L R A++F+DLDRFK +ND Sbjct: 417 RLKETEARIRDLAYYDPLTGLPNRRLLDDRLQVELAHAARLRCRLAVMFVDLDRFKRIND 476 Query: 730 SAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN-VESARFIATRIISAV 788 S GHA GD LL E+A+ + + LR D +AR+GGDEF ++L + + + A +A R+++ + Sbjct: 477 SLGHAVGDKLLVEIAARLRASLRDDDTVARMGGDEFLVVLNNLSGPDEAATMARRMVAEL 536 Query: 789 NDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQA 848 EGR V S G+ + D++ A ++ AD+A Y +K+ GR ++EP Sbjct: 537 RR-PVNVEGRELVVTTSVGVAVYPDDSRDADTLVKHADVAMYRAKDEGRNSFQLFEPAMN 595 Query: 849 AAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQ 907 A ER A+ R + ++L + V + + + +L W + ++ Sbjct: 596 ARSLERLALET-ALHRALPRDELQLYFQPVM--KAEGGELVAVEALLRWRHPDLGLVSPA 652 Query: 908 TFRRSFSDPALSHALDRRVFHEFFQQAAKA--VASKGISISLPLSVAGLSSATLVNDLLE 965 F D L + V + + + + + +S + Sbjct: 653 DFIPLAEDTGLIVPIGEWVLRSACEHHRRWCEAGGAPLHMMVNISARQFREEGFAAMVGS 712 Query: 966 QLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLSQVGRDLQIFNSLKAN 1021 L + + P L L + ++D + + LR G + + G LK Sbjct: 713 VLAETGMTPGDLTLELTESMLMDDTDRALARLDHLRALGVCLAIDDFGTGYSSLAYLKRF 772 Query: 1022 MADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDL 1081 D L +D + N D L++ I LG++ +A V +D L G DL Sbjct: 773 PIDELKIDRLFVRGIDRNTRDAALVSAIVSLGHSLGLRVVAEGVETAAHLDVLRRQGCDL 832 Query: 1082 IYGEVIADAQPLDLLVNS 1099 G + P + V + Sbjct: 833 AQGFHFSPPLPWEEFVKA 850 Score = 77.6 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 61/152 (40%), Gaps = 4/152 (2%) Query: 286 VMYAFRAERKHISESETHFRNA---MEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEEL 342 + A RA +S S+ A +E S G+ + + L N A + GY+ EE+ Sbjct: 285 LHDALRARDLALSASQRDLYLAEKVIESSLEGVMVTDAHARILSVNPAFTRMTGYAPEEV 344 Query: 343 RGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDG 402 GL L ++ + G+ + E + G+V LL ++ +R +G Sbjct: 345 VGLNPSVLNSGRQSPAFYARMWDGLLGDGQ-WQGEVWNRRKTGEVYPQLLHITAIRDREG 403 Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLA 434 ++ A DI+ LK TE + L L Sbjct: 404 VLTHYAALFTDISRLKETEARIRDLAYYDPLT 435 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 653 bits (1685), Expect = 0.0, Method: Composition-based stats. Identities = 147/694 (21%), Positives = 292/694 (42%), Gaps = 30/694 (4%) Query: 416 ELKRTEQVNQQLMERITLANEAGGIGIWEWELKP-NIFSWDKRMFELYEIPPHIKPNWQV 474 E ++ E+V ++ R+ ++ GI + + I ++ Sbjct: 269 ERRQAERVLKETEARLKTIVDSVHTGILVIDPENHRIVDVNELAASSLGRTREEMIGTSC 328 Query: 475 WYECVLPEDRQHA-EKVIRDSLQSRSPFKLEFRITVKDGIR--HIRALANRVLNKEGEVE 531 + + P + ++ L + E + DG R I+ ++ VL+ E Sbjct: 329 -HRFICPNEEGRCPITDLQQELDNE-----ERDLIRADGSRLPVIKTVSRVVLDGR---E 379 Query: 532 RLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWT 591 LL +D++ KQ+ +L + +ER + +++ + V+ DM + F++P K+ G T Sbjct: 380 HLLESFVDISRRKQVENSLKESEERYRMLVENQADLVIKTDMTGNLLFVSPSFCKLFGQT 439 Query: 592 QEEALGVPLLTVLHITFG-DNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITP 650 +E+ LG LL V+ + ME + +DTS ++ + R G + +++ Sbjct: 440 EEKLLGKALLPVIMLPEQLATAAGMEQMICSDTS---YYREYLSPTREGK-RWIGWALRC 495 Query: 651 LSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNST 710 + G + + +D+T+ + + A HD +T L NR +L++ + Sbjct: 496 IFNQSGQAEAIIGMGRDITDRKTAESTIEQLAYHDPVTGLPNRTLLHDRLQLAINRAERD 555 Query: 711 HQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLP 770 Q A++F+DLDRFKA+NDS GHA GD LLR + + +L +RSSD +ARLGGDEF +L+ Sbjct: 556 SQGVAILFLDLDRFKAINDSLGHAMGDQLLRLVGNRLLDCVRSSDTVARLGGDEFVVLIS 615 Query: 771 DCNVESAR-FIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIAC 829 + + A + +I+ + + + + +S GI+L + A E++ AD+A Sbjct: 616 ALDNDHAVGSVVMKILEQLCE-PYQIDDHEVYTSSSIGISLFPRDGRDAEELLKNADMAM 674 Query: 830 YASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNL 889 Y +K GR + P+ +ER + R ++ + ++ R Sbjct: 675 YQAKEAGRNTCHFFSPELNMRATERLLLE-STMRRALEREEFFLVYQPQMELR--SGHIA 731 Query: 890 WLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV--ASKGISIS 946 + +L W + ++ F + L L V E +QA + + ++ Sbjct: 732 GIEALLRWRHPDLGVVPPNNFIPIAEETGLIVPLGEWVLAEACRQAVRWQQEGQPPLRMA 791 Query: 947 LPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCR 1002 + +S L + + L + L P LL L + A++++ E ++++L+ G Sbjct: 792 VNVSARQFRQRNLGLRIEKILMETGLDPALLELELTESAVMENPEEAILTLRQLKKMGIT 851 Query: 1003 IVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIA 1062 + + G + LK D L +D +V + D + I A + + +A Sbjct: 852 LSIDDFGTGYSSLSHLKHFPIDRLKIDRSFVKHVTRDHNDATIAEAIIALAHSMKLTVVA 911 Query: 1063 GPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 + M+ + D + G ++ + Sbjct: 912 EGIEHSEQMEFMHQRHCDTMQGYYLSRPVTAEEF 945 Score = 115 bits (289), Expect = 1e-23, Method: Composition-based stats. Identities = 59/341 (17%), Positives = 129/341 (37%), Gaps = 32/341 (9%) Query: 290 FRAERKHISESETHFRNAMEYSAIGMALVGTE-GQWLQTNKALCQFLGYSQEELRGLTFQ 348 R + + E+E + ++ G+ ++ E + + N+ LG ++EE+ G + Sbjct: 270 RRQAERVLKETEARLKTIVDSVHTGILVIDPENHRIVDVNELAASSLGRTREEMIGTSCH 329 Query: 349 QLTWPEDLNK-DLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYF 407 + P + + + +++ + E E+ +G + + VS V DG + Sbjct: 330 RFICPNEEGRCPITDLQQELDNE------ERDLIRADGSRLPVIKTVSRV-VLDGRE-HL 381 Query: 408 IAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPH 467 + DI+ K+ E ++ ER + E + + ++ N+ +L+ Sbjct: 382 LESFVDISRRKQVENSLKESEERYRMLVENQADLVIKTDMTGNLLFVSPSFCKLFGQTEE 441 Query: 468 IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKE 527 + +LPE A + + S + + E+ ++G R I + N+ Sbjct: 442 KLLGKALLPVIMLPEQLATA-AGMEQMICSDTSYYREYLSPTREGKRWIGWALRCIFNQS 500 Query: 528 GEVERLLGINMDMTEVKQLNEALFQ-----------EKERLHITL---------DSIGEA 567 G+ E ++G+ D+T+ K + Q + LH L DS G A Sbjct: 501 GQAEAIIGMGRDITDRKTAESTIEQLAYHDPVTGLPNRTLLHDRLQLAINRAERDSQGVA 560 Query: 568 VVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITF 608 ++ +D+ + +N G +G LL + + Sbjct: 561 ILFLDLD-RFKAINDSLGHAMGDQLLRLVGNRLLDCVRSSD 600 Score = 78.4 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 59/356 (16%), Positives = 108/356 (30%), Gaps = 39/356 (10%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + + + ESE +R +E A + G L + + C+ G ++E+L G Sbjct: 388 ISRRKQVENSLKESEERYRMLVENQADLVIKTDMTGNLLFVSPSFCKLFGQTEEKLLGKA 447 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 + + +E++I + + Y E R G W A+ + + G Sbjct: 448 LLPVIMLPEQLATAAGMEQMICSDTSYYR-EYLSPTREGK-RWIGWALRCIFNQSGQAEA 505 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP 466 I DI + K E +QL + L D+ + Sbjct: 506 IIGMGRDITDRKTAESTIEQLAYHDPVT-----------GLPNRTLLHDRLQLAINRAER 554 Query: 467 HIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNK 526 + ++ + DR K I DSL +L R+ + +R+ Sbjct: 555 DSQGVAILFLDL----DRF---KAINDSLGHAMGDQL-LRLVGNRLLDCVRSSDTVARLG 606 Query: 527 EGEVERLLGINMDMTEV-----KQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMN 581 E L+ + V K L + + H S + + Sbjct: 607 GDEFVVLISALDNDHAVGSVVMKILEQLCEPYQIDDHEVYTSSSIGISLFPRDGR----- 661 Query: 582 PVAE-----KMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDV 632 E M+ + +EA G N E + T R A+E++ Sbjct: 662 DAEELLKNADMAMYQAKEA-GRNTCHFFSPEL--NMRATERLLLESTMRRALEREE 714 >UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T1A8_JANMA Length = 910 Score = 653 bits (1685), Expect = 0.0, Method: Composition-based stats. Identities = 176/900 (19%), Positives = 322/900 (35%), Gaps = 74/900 (8%) Query: 261 RTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGT 320 + + + L L + + YA R +++ T + + I L Sbjct: 7 KAHGANLNLLQAGLYALASPLLNLLRRYATRRRAGFLADPAT--ESLLAADKIVWVLRIP 64 Query: 321 EGQWLQTNKALCQFLGYSQEELRGLT--FQQLTWPEDLNKDLQQVEKLISGEINTYSMEK 378 +GQ + +K + G S E + + + P D L+ + ++ T + Sbjct: 65 DGQVIYASKTVEALYGSSPERFYANSRLWLENIAPADREPALELLGSILHEPQQTLRL-- 122 Query: 379 RYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAG 438 R +G W + TDG + DI E + + ++ Sbjct: 123 RINRSDGSPRWIEYHARFIPDTDGRSGHVKLIGTDITTRHHLEIALARSNRALRAIHDCE 182 Query: 439 G------------IGIWEWELKPN-IFSWDKRMFELYEIPP-HIKPNWQVWYECV-LPED 483 GI + +W + I P + Q + + + +P Sbjct: 183 DVISEAVDENALLQGICDVVTATGYRMAWVGILAADGAIIPVGLTQEHQGYLDALKIPLQ 242 Query: 484 RQHA-EKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLN----------------- 525 + I +LQ+R P + R Sbjct: 243 AGGVGTRAINTALQTRRPAVANYFANDMSPTPWRAEAMRRGFYSKLVLPMGDDKDVIGVF 302 Query: 526 ----------KEGEVERLLGINMDMT------EVKQLNEALFQEKERLHITLDSIGEAVV 569 EV L+ + +T + +A ++ AV+ Sbjct: 303 NVYASEPDAFDAQEVALLVSLAQRVTVEIRAHRDRHGRQAAEAALRLRERAIECSANAVI 362 Query: 570 CID---MAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRS 626 I ++NP E+++G+T EA+G +L G + I +A + Sbjct: 363 ISSAQVPEFAIEYVNPAFERITGYTAAEAIGRSSSFLLRNDHEQAG--LYEIRAALAEKR 420 Query: 627 AIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDA 686 + + + ++G + I P+ +G V + D+T ++ L ASHD Sbjct: 421 EGKAVLRNYRKNGSLFWNDLYIAPVKDDEGKTTHFVAAMSDITPMKQYETTLHRLASHDV 480 Query: 687 LTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASL 746 LT L NRA + +L + +V +DLDRFK VND+ GH AGD LL+ ++ Sbjct: 481 LTGLPNRALLQDRLENAIAYSARNGHAVWVVLVDLDRFKFVNDTMGHQAGDVLLKIISDR 540 Query: 747 MLSMLRSSDVLARLGGDEFGLLLPDCNVES---ARFIATRIISAVNDYHFIWEGRVHRVG 803 + + +R SD +ARLGGDEF L+LP+C + + RI+ AV +G + Sbjct: 541 LQASVRESDTVARLGGDEFVLVLPECGDGPSGYSSDVIQRIMEAVVK-PLTIQGSEFFLS 599 Query: 804 ASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQW 863 S GI + ++ +++ AD+A Y SK GR Y P ER + + + Sbjct: 600 CSMGIAVYPNDGADPTTLLAHADVAMYRSKELGRNNFQFYTPAMNDQALERLRIEGELR- 658 Query: 864 RMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHAL 922 I+ N+L++ + L +L W+ ++ +F + L + Sbjct: 659 HAIELNELVLHYQPQVDLH--TGAIVGLEALVRWNHPILGMVQPGSFISLAEETGLIIPI 716 Query: 923 DRRVFHEFFQQAAKAV--ASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLI 980 V +QA + I++ LS + A+L+ + + L+ + L R L + Sbjct: 717 GAWVLQTACRQAKAWQDMGFTQLRIAVNLSARQFTQASLLESIKDTLQETGLEARFLEIE 776 Query: 981 IPAEAILDHAE----SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANV 1036 + +++ E +++ L+ G ++ + G LK D L +D ++ Sbjct: 777 LTESSVMADIERNILTLRDLKSLGVQLSVDDFGTGHSSLAYLKRFPIDTLKIDRSFVRDI 836 Query: 1037 QGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 N D +++ I A L + IA V MD L G + I G P D + Sbjct: 837 AINQDDASIVSSIISLAHNLKLNVIAEGVETASQMDILRAQGCNEIQGYYFCKPLPSDQI 896 >UniRef50_Q2BHU8 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BHU8_9GAMM Length = 892 Score = 652 bits (1683), Expect = 0.0, Method: Composition-based stats. Identities = 144/696 (20%), Positives = 280/696 (40%), Gaps = 29/696 (4%) Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQV 474 L+ +E+ + R+ A ++E +++ + + P V Sbjct: 197 AALRESERTSNHARHRLEATFSAIPDLLFEMDIEGRYLACHASDPDDLVAKPEELIGKSV 256 Query: 475 WYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLL 534 + + + ++ Q + IR++ + + V G+R +R + E + Sbjct: 257 F-DFIPLDEAQIIVEAIREADLKGISKGRQVTLQVGRGLREFELSVSRKHDDESSEHHFI 315 Query: 535 GINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEE 594 ++ D+TE K+ + + T E ++ D +I +N +++G+ EE Sbjct: 316 VLSRDITERKRHER-----ELHIAATAFDSQEGMLITDAEHRILRVNNAFTRVTGYEAEE 370 Query: 595 ALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTL 654 A+G + ++ + + + + + + +V +SG Y H +IT + T Sbjct: 371 AIGNTPAFLQSGKHSED--FYQTMMESLSKNNYWQGEVWNQRKSGEIYPQHLTITAVQTS 428 Query: 655 DGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRH 714 G V D+T+ ++ + A +D+LT L NR S +++L L + T Q Sbjct: 429 AGEITNYVGAFTDITQRKQDEADIHQLAFYDSLTGLPNRRSLQERLDSALSSCRHTRQLG 488 Query: 715 ALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNV 774 A+ FIDLD FK +ND+AGH GD LL E+A+ + S +R++D++ARLGGDEF ++L + V Sbjct: 489 AVFFIDLDNFKNLNDTAGHDQGDKLLVEVANRLNSCVRNADMVARLGGDEFIVILENLGV 548 Query: 775 ESARFIAT------RIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIA 828 + + +A ++I + + + S GI L + + EVM ++D+A Sbjct: 549 DESNVLAQVKDIVAKVILTIQA-PLTIGTQAYHPTCSIGIALFSEKDFS-DEVMKRSDMA 606 Query: 829 CYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARN 888 Y +K+ G+ ++P A A M D ++ + QL + + Sbjct: 607 MYQAKSSGKNTYRFFDPVAEEALCSLARMDADLRF-ALSNQQLELHYQPQYRCQT----L 661 Query: 889 LWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK---GIS 944 + +L W + ++ F D L + V + +Q + + Sbjct: 662 IGAEALLRWKHPDRGMVSPAEFIPLAEDTGLILPIGEWVIRQACKQLQQWQERPETAELF 721 Query: 945 ISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAG 1000 I++ +S V + + L + L L + +L E +Q LR G Sbjct: 722 IAVNVSARQFCQDNFVESVRQLLNTYGVSAEKLKLELTESLVLMDVEDTIQKMQALRSYG 781 Query: 1001 CRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKT 1060 R L G + LK D + +D +V + D ++ I Q LG+ Sbjct: 782 IRFALDDFGTGYSSLSHLKRLPLDQIKIDRSFIRDVPEDQDDSEIVQAIIAMGQNLGLNV 841 Query: 1061 IAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 +A V + L+ + I G ++ +D Sbjct: 842 LAEGVETDEQLAFLTELDCLDIQGFLLGRPSSIDKF 877 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 53/332 (15%), Positives = 107/332 (32%), Gaps = 24/332 (7%) Query: 232 RMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFR 291 ++ + + MMV L++ +L + + P +LL + + + Sbjct: 136 QLYLMGLTVHVSMMVCLLVLPYSTLGLLLSEITLPIIVIFPLATVLLGGLLSQQISR--K 193 Query: 292 AERKHISESET-------HFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRG 344 + ESE + + EG++L + + L EEL G Sbjct: 194 KAEAALRESERTSNHARHRLEATFSAIPDLLFEMDIEGRYLACHASDPDDLVAKPEELIG 253 Query: 345 LTFQQLTWPEDLNKDLQQVEKL-ISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGT 403 + ++ ++ + + + G + + + L+VS + + Sbjct: 254 KSVFDFIPLDEAQIIVEAIREADLKGISKGRQVTLQVGR---GLREFELSVSRKHDDESS 310 Query: 404 PLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFEL-- 461 +FI DI E KR + I G+ + + I + + Sbjct: 311 EHHFIVLSRDITERKR-----HERELHIAATAFDSQEGMLITDAEHRILRVNNAFTRVTG 365 Query: 462 YEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA- 520 YE I ED + + +SL + ++ E K G + + L Sbjct: 366 YEAEEAIGNTPAFLQSGKHSED---FYQTMMESLSKNNYWQGEVWNQRKSGEIYPQHLTI 422 Query: 521 NRVLNKEGEVERLLGINMDMTEVKQLNEALFQ 552 V GE+ +G D+T+ KQ + Q Sbjct: 423 TAVQTSAGEITNYVGAFTDITQRKQDEADIHQ 454 Score = 76.1 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 59/153 (38%), Gaps = 2/153 (1%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 ERK A + S GM + E + L+ N A + GY EE G T L Sbjct: 322 TERKRHERELHIAATAFD-SQEGMLITDAEHRILRVNNAFTRVTGYEAEEAIGNTPAFLQ 380 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 + Q + + +S + N + E ++G++ L ++ V+ + G ++ Sbjct: 381 SGKHSEDFYQTMMESLS-KNNYWQGEVWNQRKSGEIYPQHLTITAVQTSAGEITNYVGAF 439 Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWE 444 DI + K+ E QL +L + E Sbjct: 440 TDITQRKQDEADIHQLAFYDSLTGLPNRRSLQE 472 >UniRef50_C7RQ11 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RQ11_9PROT Length = 978 Score = 651 bits (1681), Expect = 0.0, Method: Composition-based stats. Identities = 142/710 (20%), Positives = 270/710 (38%), Gaps = 25/710 (3%) Query: 404 PLYFIAQIEDINELKRTEQVNQQLM---ERITLANEAGGIGIWEWELKPNIF---SWDKR 457 P IED R Q + + L AG ++ + Sbjct: 128 PASLAGVIEDAARQARFRQESSSVRPATTHRQLVLSAGPTVLYACGVDGQSLVPLWVSDN 187 Query: 458 MFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRIT-VKDGIRHI 516 + + P W V DR H + L S + E+R + +R + Sbjct: 188 ITRVLHFSPAECLAPDWWVSHVHDADRAHVLETWPRLLADGSLLQ-EYRFRDGQGVVRWL 246 Query: 517 RALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMK 576 R + + + ++G D+T AL + + L+S + V+ D+ + Sbjct: 247 RDHKRLLFDANHQPLAVVGNWDDVTA----GHALAERQRLHATALESTRDGVLIADLTGR 302 Query: 577 ITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHC 636 I +NP +M+G+T EA+G + + + + ++++ T + ++ Sbjct: 303 IISVNPAFSEMTGYTAAEAIGRNPRLLQ--SGRHDRAFYQAMWASLTQAGHWQGELWNRR 360 Query: 637 RSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASF 696 G Y +++ + G + V D+++ + +L + A +D LT L NR Sbjct: 361 ADGEIYPQWATLSVVKDEHGQPTHYLAVFTDLSKLKHREEELEHLAHYDPLTDLPNRLLL 420 Query: 697 EKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDV 756 L+ L+ + A++ I+LD+FK VNDS GHA GD LL + + + + LR DV Sbjct: 421 RSLLQHALERAQRQGGKSAVLVINLDQFKNVNDSLGHALGDELLLGVTARLKARLRHEDV 480 Query: 757 LARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNN 815 + RLG DEF +L + E+A IA +++A+ + +G AS GI++ + Sbjct: 481 VGRLGADEFVAILEASQDAENAGSIAGDLLAALAPPFVLADGHETYARASIGISVFPQDG 540 Query: 816 HQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLA 875 A +++ AD+A + +K G + Y + +R M + R + + +L++ Sbjct: 541 KGANDLLRSADVAMHRAKQRGGNQYAFYTGELGHGALQRLEMETALR-RALIQGELVLHY 599 Query: 876 HGVASPRIPEARNLWLISLKLWSCEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQA 934 + + +L W G ++ F + L + V +E +Q Sbjct: 600 QPKLD--LASGVIVGGEALLRWQRPGFGLVPPYRFIPLAEETGLIVPIGAWVINETCRQI 657 Query: 935 AKA--VASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAIL----D 988 + +++ +S + L L L + PR+L L + ++ Sbjct: 658 RAWAEAGQPSVMVAVNVSARQFAGGELEAVLATALRKHAVDPRMLGLELTESMLMAAPEQ 717 Query: 989 HAESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITI 1048 E + LR G + L G + L D L +D ++ + + T Sbjct: 718 ATERLDALRRVGVAVALDDFGTGYSSLSYLSRFPVDELKIDRSFITHIVSDPKAANIATA 777 Query: 1049 IQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 + A R+ +K +A V + L D I G + + P D Sbjct: 778 VIALAHRMALKVVAEGVETETQLSYLRKNRCDQIQGYLFSAPVPADEFAT 827 Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 57/140 (40%), Gaps = 1/140 (0%) Query: 295 KHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPE 354 ++E + A+E + G+ + G+ + N A + GY+ E G + L Sbjct: 274 HALAERQRLHATALESTRDGVLIADLTGRIISVNPAFSEMTGYTAAEAIGRNPRLLQSGR 333 Query: 355 DLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDI 414 Q + ++ + + E +G++ +S+V+ G P +++A D+ Sbjct: 334 HDRAFYQAMWASLT-QAGHWQGELWNRRADGEIYPQWATLSVVKDEHGQPTHYLAVFTDL 392 Query: 415 NELKRTEQVNQQLMERITLA 434 ++LK E+ + L L Sbjct: 393 SKLKHREEELEHLAHYDPLT 412 Score = 79.5 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 80/473 (16%), Positives = 143/473 (30%), Gaps = 57/473 (12%) Query: 279 PANIMTMVMYAFRAERKHISESE-----THFRNAMEYSAIGMALVGTEGQ---WLQTNKA 330 PA++ ++ A R R S TH + + + G +GQ L + Sbjct: 128 PASLAGVIEDAARQARFRQESSSVRPATTHRQLVLSAGPTVLYACGVDGQSLVPLWVSDN 187 Query: 331 LCQFLGYSQEELRGLTFQ-QLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVW 389 + + L +S E + D L+ +L++ + E R+ + G V W Sbjct: 188 ITRVLHFSPAECLAPDWWVSHVHDADRAHVLETWPRLLAD--GSLLQEYRFRDGQGVVRW 245 Query: 390 ALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKP 449 L+ + PL + +D+ + A E+ G+ +L Sbjct: 246 LRDHKRLLFDANHQPLAVVGNWDDVT----AGHALAERQRLHATALESTRDGVLIADLTG 301 Query: 450 NIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITV 509 I S + E+ DR + + SL ++ E Sbjct: 302 RIISVNPAFSEMTGYTAAEAIGRNPRLLQSGRHDRA-FYQAMWASLTQAGHWQGELWNRR 360 Query: 510 KDGIRHI-RALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKER-----------L 557 DG + A + V ++ G+ L + D++++K E L L Sbjct: 361 ADGEIYPQWATLSVVKDEHGQPTHYLAVFTDLSKLKHREEELEHLAHYDPLTDLPNRLLL 420 Query: 558 HITLDSIGE---------AVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITF 608 L E AV+ I++ + +N G E LGV + Sbjct: 421 RSLLQHALERAQRQGGKSAVLVINLD-QFKNVNDSLGHALG--DELLLGVTARLKARLRH 477 Query: 609 GD------NGPLMENIYSADTSR--SAIEQDVV------LHCRSGGSYDVHYSI-TPLST 653 D + + ++ + +I D++ G SI + Sbjct: 478 EDVVGRLGADEFVAILEASQDAENAGSIAGDLLAALAPPFVLADGHETYARASIGISVFP 537 Query: 654 LDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALT--HLANRASFEKQLRILL 704 DG +L DV R R + A + R E LR L Sbjct: 538 QDGKGANDLLRSADVAMHRAKQRGGNQYAFYTGELGHGALQRLEMETALRRAL 590 >UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Nitrosococcus oceani RepID=Q3JAR2_NITOC Length = 944 Score = 651 bits (1679), Expect = 0.0, Method: Composition-based stats. Identities = 139/572 (24%), Positives = 240/572 (41%), Gaps = 14/572 (2%) Query: 535 GINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEE 594 G +D Q + +S E V+ D + +N ++G + E Sbjct: 369 GSILDAYHNDQRRKNAESRLRLTAKVFESTVEGVIITDTKAYVVDVNEAFTHITGIARSE 428 Query: 595 ALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTL 654 +G L T+ T + + + A S + ++ ++G Y + + + Sbjct: 429 IMGRHLSTLQ--TKQEKPISFQRVRHAIKSTGQWQGELWSQRKNGEIYPLWVTANAVRNS 486 Query: 655 DGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRH 714 V + D+T ++ ++L Y A HDALT L NR+ F +L + H R Sbjct: 487 KEEITHFVAIFSDITLRKQTEQRLYYLAHHDALTGLPNRSLFLDRLEHAIHHAQRHHHRI 546 Query: 715 ALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNV 774 A++FIDLDRFK +ND+ GH GD LL+++A M +R+ D +ARLGGDEF +++ + Sbjct: 547 AVLFIDLDRFKFINDTLGHPIGDILLKQVAERMRLNIRAEDTIARLGGDEFTVIIENFTD 606 Query: 775 ESARF-IATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASK 833 SA I +IISA + F +G V AS G++L ++ H+A+ ++ +AD A Y +K Sbjct: 607 TSAISLITQKIISA-CEKPFNIKGNELFVSASIGVSLYPEDGHEASMLLQRADAAMYQAK 665 Query: 834 NGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLIS 893 G+ + + A +E+ A+ + R + + + + + + + + + Sbjct: 666 KRGKSCCQFFTTEINTAATEQLALK-NLLRRALARKEFQLYYQPIIN--MESGAIVSVEA 722 Query: 894 LKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK--GISISLPLS 950 L W E +I TF + L L V QA S + I++ LS Sbjct: 723 LIRWVDPELGLISPNTFIPLAEENGLILPLGEWVLQTACTQAKIWNQSNPYPVRIAINLS 782 Query: 951 VAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLS 1006 L + E L+ +P P L L + +++ E ++ L+ GCR+ L Sbjct: 783 ARQLEQTDFSERVSEILKKTPFPTDHLELELTESMLINRMESSLKTLNTLKKMGCRLSLD 842 Query: 1007 QVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVV 1066 G LK D + +D + + D + T + A L IA V Sbjct: 843 DFGTGYSPLAYLKRFPIDTVKIDRSFVQGISIDPDDAAITTAVTTMAHSLKRAVIAKGVE 902 Query: 1067 LPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 ++ L+ I VD G I+ P + L Sbjct: 903 TREQLNFLNEIKVDEAQGYFISYPVPAEELTQ 934 Score = 79.9 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 56/143 (39%), Gaps = 2/143 (1%) Query: 293 ERKHISESETHFRN-AMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 +R+ +ES E + G+ + T+ + N+A G ++ E+ G L Sbjct: 379 QRRKNAESRLRLTAKVFESTVEGVIITDTKAYVVDVNEAFTHITGIARSEIMGRHLSTLQ 438 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 ++ Q+V I + E +NG++ + + VR++ +F+A Sbjct: 439 TKQEKPISFQRVRHAIKS-TGQWQGELWSQRKNGEIYPLWVTANAVRNSKEEITHFVAIF 497 Query: 412 EDINELKRTEQVNQQLMERITLA 434 DI K+TEQ L L Sbjct: 498 SDITLRKQTEQRLYYLAHHDALT 520 >UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKJ2_CELJU Length = 798 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 142/623 (22%), Positives = 250/623 (40%), Gaps = 25/623 (4%) Query: 480 LPEDRQH-AEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLNKEGEVERLLGIN 537 LP D I +L+ + LEF+ + +RH A + + +L + Sbjct: 166 LPSDIAALIGTRIDAALRGKGMQMLEFQWSRDPMCVRHWEARIVPR-----DRQEVLLVV 220 Query: 538 MDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALG 597 ++T+ +Q L + ++ EA++ D +I +N E + G+ +++ LG Sbjct: 221 REITQRRQQENQLRLWAK----VFEASNEAILITDANFRIISVNRAYETIMGYREQDVLG 276 Query: 598 VPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGS 657 V L V N+ S R + +++ +SG + +S+T ++ G Sbjct: 277 VDTLEV--GAKLQTYSFYRNLVSLLKERGHWQGELINQRKSGEEFPSWFSVTQVTNSRGE 334 Query: 658 NIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALV 717 + + D+TE + Q+ + A HDALT L NR +L + + V ++ ++ Sbjct: 335 PEHYIAIFNDITEHKNSRAQIEFLAHHDALTGLPNRILLNDRLEMAITQVRRQGEKLGIL 394 Query: 718 FIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVES- 776 FIDLDRFK VNDS GH GD +L+E A + + +R+ D ++RLGGDEF +L P E Sbjct: 395 FIDLDRFKNVNDSLGHGVGDQILQEAAKRLTANVRTGDTVSRLGGDEFVVLFPRVRTEGN 454 Query: 777 ARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGG 836 + ++ + + +G + S GI + D+ ++ AD A Y +K G Sbjct: 455 LADLTIKLREQL-QLPYTVDGISLHITPSIGIAVYPDDGEDPNTLIKNADAAMYLAKEKG 513 Query: 837 RGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKL 896 R Y P A +R + D + I + + L +L Sbjct: 514 RNNYQFYTPTLNAKTLDRLKLESDLR-SAIDAGDFELHYQPQIIG--SSGQLWGLEALIR 570 Query: 897 WSC-EGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA--VASKGISISLPLSVAG 953 W E +I F + L L V + +Q A+ + +S+ +S Sbjct: 571 WRHRERGLISPAEFIPLAEETGLIVGLGDWVLVQAVKQLAEWRRQGHNHLVVSVNISALQ 630 Query: 954 LSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRLAGCRIVLSQVG 1009 ++ + L+ + L P + L + ++ ++++ LR G RI + G Sbjct: 631 FRQGDFLDRVKHILQEAQLVPDAIELELTETMLMQDVQSAIQTLKGLRELGFRIAIDDFG 690 Query: 1010 RDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPL 1069 N L+ + L +D + ++ I AQ LG +TIA V Sbjct: 691 TGFSSLNYLRHLPINVLKIDQSFVREMLQEPESLAIVESIIALAQALGKETIAEGVETRA 750 Query: 1070 VMDTLSGIGVDLIYGEVIADAQP 1092 D L G L+ G A P Sbjct: 751 EFDVLQARGCRLMQGYFFARPMP 773 Score = 76.1 bits (186), Expect = 8e-12, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 59/150 (39%), Gaps = 1/150 (0%) Query: 285 MVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRG 344 +++ +R+ + E S + + + + N+A +GY ++++ G Sbjct: 217 LLVVREITQRRQQENQLRLWAKVFEASNEAILITDANFRIISVNRAYETIMGYREQDVLG 276 Query: 345 LTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTP 404 + ++ + + L+ E + E ++G+ + +V+ V ++ G P Sbjct: 277 VDTLEVGAKLQTYSFYRNLVSLLK-ERGHWQGELINQRKSGEEFPSWFSVTQVTNSRGEP 335 Query: 405 LYFIAQIEDINELKRTEQVNQQLMERITLA 434 ++IA DI E K + + L L Sbjct: 336 EHYIAIFNDITEHKNSRAQIEFLAHHDALT 365 >UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X9G9_METSD Length = 984 Score = 650 bits (1677), Expect = 0.0, Method: Composition-based stats. Identities = 176/866 (20%), Positives = 315/866 (36%), Gaps = 79/866 (9%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKA---LCQFLGYSQEELRGLTFQ 348 A + R ++ S + L G+WL N + L G + + Sbjct: 114 ASEYELRSMLNLLRKLIDASPDYICLKDGAGRWLHANTSGLSLLHLNGVNTQGKTDRELA 173 Query: 349 QLTWPE--DLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 LT P D + Q ++ + E+ GD V ++ V + H DG+ Sbjct: 174 DLTHPNLRDFMQHWQAADEYVWETGQLLREEETVPLPGGDRVLDVIKV-PLFHDDGSRHG 232 Query: 407 FIAQIEDINELKRTEQVNQQ-----------------------------------LMERI 431 + DI + K+ E +Q Sbjct: 233 IVTLGRDITDRKQVESQLRQRSAILDALISCDWLLHSSESWQKVAVGVLELLGLASHASR 292 Query: 432 TLANEAGGIGIWEWELKPNIFSWD----KRMFELYEIPPHIKPNWQVWYECV-------- 479 + E + + W+ K + + Y +++ W + Sbjct: 293 AALLKNSSDIEAEAPISELLHHWNAPGFKPLSDGYHCIDYLRDGCSRWLNILQQGSPIFG 352 Query: 480 LPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVE--RLLGIN 537 +D E+ + S+S F I H + + + LG Sbjct: 353 NADDFPPDERRFLLNHDSQS-----FVIIPIFVHAHWWGVIMIERDHAASTVTSQELGAL 407 Query: 538 MDMTE---VKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEE 594 M + V E+ + I +S E + D ++ +N ++G+T+++ Sbjct: 408 MSIGRSFGVAIQRESSDHRLHQAKIAFESTAEGIFITDDELRTIAINQGFTDITGYTEDD 467 Query: 595 ALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTL 654 LG + VL P E I+ A T + ++ Y ++T ++ Sbjct: 468 VLG-NIPNVLEADLKKPEPHRE-IWKALTREGRWRGEFWNQRKNNEQYAEWVTLTAVNNE 525 Query: 655 DGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRH 714 +G I V V D++E + +L+ + D LT L NR + L ++ Sbjct: 526 EGKVINYVGVFADISEIKHSQSRLNELVNRDPLTGLPNRRLMHELLDHAIKYAEREQNEI 585 Query: 715 ALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-N 773 AL+F+DLDRFKA+ND+ GH GD LL E++ + + +R SD +ARLGGDEF +++ Sbjct: 586 ALLFVDLDRFKAINDTLGHQMGDKLLFEVSQRIRAAVRDSDAVARLGGDEFIVMMDVLRE 645 Query: 774 VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASK 833 E A +A +IIS++ + F+ +GR + AS GI++ D++ ++ ADIA Y K Sbjct: 646 REDAAKVAKKIISSLQN-EFLIDGRELFISASVGISVYPDDSLDVDGLIKAADIAMYQVK 704 Query: 834 NGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLIS 893 N G+ Y + ER + ++ R + +Q + S + R + S Sbjct: 705 NKGKNNHCFYSADLSQNAVERFTLE-NQLRRALARDQFEVYYQAQVS--LETGRIIGAES 761 Query: 894 LKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGIS---ISLPL 949 L W E ++ F + L + V + Q + +G +S+ + Sbjct: 762 LIRWIHPELGVVSPAKFIPLAEETGLIIPIGEWVLRQSAMQVKEW-HDQGFDIDWVSVNV 820 Query: 950 SVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESV----QKLRLAGCRIVL 1005 S + + + + L + LL L I ++ + E V +++ G R+ + Sbjct: 821 SGVQIQRSNFADTVYGILVETDCESHLLELEITESTVMHNTEYVIDVFDRIKHLGVRLAI 880 Query: 1006 SQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPV 1065 G + LK D + +D ++ N D + T I AQ LG IA V Sbjct: 881 DDFGTGYSSLSHLKRLPLDKIKIDQSFVRDLPNNSDDAAIATAINAMAQSLGFTVIAEGV 940 Query: 1066 VLPLVMDTLSGIGVDLIYGEVIADAQ 1091 L IG G + + Sbjct: 941 ETRQQASFLKKIGCQQGQGYLYSRPV 966 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 67/168 (39%), Gaps = 1/168 (0%) Query: 278 LPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGY 337 L A + + +R+ + A E +A G+ + E + + N+ GY Sbjct: 404 LGALMSIGRSFGVAIQRESSDHRLHQAKIAFESTAEGIFITDDELRTIAINQGFTDITGY 463 Query: 338 SQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLV 397 +++++ G L + +++ K ++ E + E +N + + ++ V Sbjct: 464 TEDDVLGNIPNVLEADLKKPEPHREIWKALTRE-GRWRGEFWNQRKNNEQYAEWVTLTAV 522 Query: 398 RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEW 445 + +G + ++ DI+E+K ++ +L+ R L + E Sbjct: 523 NNEEGKVINYVGVFADISEIKHSQSRLNELVNRDPLTGLPNRRLMHEL 570 Score = 64.1 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 57/159 (35%), Gaps = 4/159 (2%) Query: 533 LLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQ 592 + D+TE L L +D+ + + D A + N + Sbjct: 102 YVLYMQDVTERFASEYELRSMLNLLRKLIDASPDYICLKDGAGRWLHANTSGLSLLHLNG 161 Query: 593 EEALGVPLLTVLHITFGDNGPLMENIYSADT---SRSAIEQDVVLHCRSGGSYDVHYSIT 649 G + +T + M++ +AD + ++ GG + Sbjct: 162 VNTQGKTDRELADLTHPNLRDFMQHWQAADEYVWETGQLLREEETVPLPGGDRVLDVIKV 221 Query: 650 PLSTLDGSNIGSVLVIQDVTESRKMLRQLSY-SASHDAL 687 PL DGS G V + +D+T+ +++ QL SA DAL Sbjct: 222 PLFHDDGSRHGIVTLGRDITDRKQVESQLRQRSAILDAL 260 Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 21/160 (13%), Positives = 55/160 (34%), Gaps = 5/160 (3%) Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP 466 ++ ++D+ E +E + ++ + +A I + + L + Sbjct: 102 YVLYMQDVTERFASEYELRSMLNLLRKLIDASPDYICLKDGAGRWLHANTSGLSLLHLNG 161 Query: 467 --HIKPNWQVWYECVLPEDR---QHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALAN 521 + + P R QH + ++ + E + + G R + + Sbjct: 162 VNTQGKTDRELADLTHPNLRDFMQHWQAADEYVWETGQLLREEETVPLPGGDRVLDVIKV 221 Query: 522 RVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITL 561 + + +G ++ + D+T+ KQ+ L Q L + Sbjct: 222 PLFHDDGSRHGIVTLGRDITDRKQVESQLRQRSAILDALI 261 >UniRef50_Q31MH3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Synechococcus elongatus RepID=Q31MH3_SYNE7 Length = 1238 Score = 650 bits (1677), Expect = 0.0, Method: Composition-based stats. Identities = 177/852 (20%), Positives = 336/852 (39%), Gaps = 37/852 (4%) Query: 259 TPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALV 318 + +L+S +P L +L + + +R + + + + G+ ++ Sbjct: 390 PSQHFLISKVPLRNELGQILGLLGIRRNVTRWRRAEQARNALSDQLEQTLAAVSDGVVVL 449 Query: 319 GTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEK 378 N Q L + E++ G F L +P +L LQ + + + +T + E Sbjct: 450 DQNFVVRALNSQAAQQLKKTSEQIIGRVFWDL-FPVELGATLQSELQPLQHQSSTRTFEL 508 Query: 379 RYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAG 438 D + V++ R T LYF DI++ + Q+ +++ ER L A Sbjct: 509 WI-----DPLSTCWEVNVHRSTAEISLYF----RDISDRVMSRQLLEEMAERFQLVTRAT 559 Query: 439 GIGIWEWELKPNIFSWDKRMFELYE-----IPPHIKPNWQV-WYECVLPEDRQHAEKVIR 492 +W+ L N + L+ I + + W + + P+ R+ + Sbjct: 560 NDAVWDRNLLTNEIWYSANYSRLFGGEEKEITQKLVQTVDLQWRDRLDPDQRERIMASLS 619 Query: 493 DSLQSR-SPFKLEFRITVKDGIR-HIRALANRVLNKEGEVERLLGINMDMTEVKQLNEAL 550 ++ + S + ++R +DG H+ V ++ G R +G D++ + NE L Sbjct: 620 GAIANGFSTWSEQYRFLRQDGTYAHVLDRGYIVRDENGRAIRAVGAMQDISAIVAANEQL 679 Query: 551 FQEKERLHITLDSIGEAVVCID---MAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHIT 607 ++S G +++ D M I ++NP EK++G++ E +G + + Sbjct: 680 RLWLR----AIESTGNSIIIADAQQPDMPIIYVNPAFEKITGFSAAEVIGRNFRFLQGL- 734 Query: 608 FGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQD 667 +E + A + E + + + G + S+ P+ G V D Sbjct: 735 -ETQQAELEEMRRALEEGTYCEVTLRSYRKDGSLFWNQISLAPVRDQKGHLTHMVASQTD 793 Query: 668 VTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAV 727 V+ES+ L A+HDALT L NR F +L A++FIDLD FKA+ Sbjct: 794 VSESKAFEEMLLQQATHDALTGLPNRLLFLDRLDQAAARARGGGSPIAVLFIDLDNFKAI 853 Query: 728 NDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISA 787 ND H+ GDA+L+ A + ++ + +ARL DEF +LL D +V+S + +I + Sbjct: 854 NDGFSHSEGDAVLQIAAGRLQQCIQEHETVARLSSDEFVILLIDLDVQSKARVKAAMIQS 913 Query: 788 VNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQ 847 + F G + AS G+ + +E++ AD+A A+K G+ + Sbjct: 914 LMAKPFEVMGNPIELTASIGVATFPHDGQSGSELLQAADLAVCAAKQQGKNLWCSFSEAM 973 Query: 848 AAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDE 906 R + D + + + +N L + + R L +L W E ++ Sbjct: 974 REQLRSRIDIEKDLR-QALIDNSLELYFQPQVD--LVTHRLLGFETLVRWNHPERGLVAP 1030 Query: 907 QTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGIS--ISLPLSVAGLSSATLVNDLL 964 F + L A+ V + + +G + +S +S + L Sbjct: 1031 GEFIPIAEESDLIDAIGLWVMRAAGLTLRRWIDHEGFTGSLSFNISARQFIRQNIFLKLF 1090 Query: 965 EQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKA 1020 + L+ +PP L + + ++++ E +Q+ R G ++ L G LK Sbjct: 1091 DVLQEFQIPPHQLEIELTESSLIESPERFVQWLQEARSMGFQVALDDFGTGYSSLGYLKR 1150 Query: 1021 NMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVD 1080 + L +D ++ + D+ ++ I A+ L ++TIA V L IG D Sbjct: 1151 LPINALKIDRSFIRDLPHDHDDQAIVQAIVAMAKVLKLRTIAEGVERLEQAAFLEAIGCD 1210 Query: 1081 LIYGEVIADAQP 1092 + G P Sbjct: 1211 AVQGFFYGPPLP 1222 Score = 68.0 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 59/387 (15%), Positives = 132/387 (34%), Gaps = 34/387 (8%) Query: 304 FRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQV 363 ++ + + +G + + Q +QT+ + + LG ++ ++QQ L+ L+ Sbjct: 189 LQSWQQLTQVGYWELDVQSQLVQTSPLVNRLLGKPSDQCL-FSWQQWLEHFQLSDRLRLE 247 Query: 364 EKLISGEINTYSMEKRYYNRNGD--VVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTE 421 + + +G ++ Y + L +VR G +E ++ T Sbjct: 248 QAIDTGMQTGRPIQATYALASDSQDRQLVELRAVIVRDLAGNVRSLRGVLEPKHQAPLTS 307 Query: 422 QVNQQLMER----ITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYE 477 L + EA I+ + + I ++ +L Sbjct: 308 LEPLPLSLDHPAVLRRILEAIPDPIYIKDYRGEILLQNRACLDL--------------QP 353 Query: 478 CVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD--GIRHIRALANRVLNKEGEVERLLG 535 V+PE + + ++ S P E + +H + N+ G++ LLG Sbjct: 354 FVMPEVIKQEDINDLATIASGLPIINEEWTINPENWPSQHFLISKVPLRNELGQILGLLG 413 Query: 536 INMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEA 595 I ++T ++ +A ++L TL ++ + VV +D + +N A + T E+ Sbjct: 414 IRRNVTRWRRAEQARNALSDQLEQTLAAVSDGVVVLDQNFVVRALNSQAAQQLKKTSEQI 473 Query: 596 LGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLD 655 +G + + G L + S ++ + S + Sbjct: 474 IGRVFWDLFPVELG--ATLQSELQPLQHQSSTRTFELWIDP---------LSTCWEVNVH 522 Query: 656 GSNIGSVLVIQDVTESRKMLRQLSYSA 682 S L +D+++ + L A Sbjct: 523 RSTAEISLYFRDISDRVMSRQLLEEMA 549 >UniRef50_Q0VL09 Sensory box protein n=2 Tax=Alcanivorax RepID=Q0VL09_ALCBS Length = 959 Score = 650 bits (1676), Expect = 0.0, Method: Composition-based stats. Identities = 214/992 (21%), Positives = 367/992 (36%), Gaps = 84/992 (8%) Query: 137 LLGGVLVVLLTPGDDPLRAFLIWVLSES--------IGALALVPLGLLFKPHYLLRHRNP 188 LL G+ +LL + ++ S G +A+V + LF Y R + Sbjct: 25 LLSGIAELLLLESAAVIILAWVYWHSPVSQPTVLTWFGIIAVVQIARLFILSYYRRQLDG 84 Query: 189 RLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSL 248 + E+L L+ L+ L ++ L S P + A L+ + + Sbjct: 85 Q---EALPLFRRMLSALALASPLLIGLAGYLFNPLD-SLFSPPMLGAQLVLICLGL---- 136 Query: 249 MMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAM 308 L T SH P + LI+L + + + + + + Sbjct: 137 ------GLSTTALVAYSSHFPTVFLYLIMLLGPAVARLSETQQHSQLALVLLMSLLGLFF 190 Query: 309 EYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLIS 368 +A + G + LQ N + D + + + ++ Sbjct: 191 LVAARRINHTGHKAMMLQAN---------------NRSLIDYLNR--ARSDAEALNEKLA 233 Query: 369 GEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLM 428 EI Y ++ + R D E L T Sbjct: 234 QEI--------YDRKD----------ARQRLQDTNDRLESMVQERTRALGETNTALAATS 275 Query: 429 ERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYE-CVLPEDRQHA 487 ER+ LA EA IG+W+W L + L N+ + V P+D Sbjct: 276 ERLELALEASNIGLWDWMLDTGLNHHTN-FDRLLGYDSAYFKNFFGDLDTLVHPDDLARI 334 Query: 488 EKVIRDSLQSRSP-FKLEFRITVKDGIRHIRALANRV--LNKEGEVERLLGINMDMTEVK 544 + + + P + +R+ DG RV ++ G R++G D+TE + Sbjct: 335 RQAMVSHFKGEDPRYHAVYRLRHADGSWRWIEDEGRVVSRSESGRAIRMIGTRRDITEDR 394 Query: 545 QLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVL 604 Q E + ++ E + +D + +N E+++G+T+ +G +L Sbjct: 395 QAQEQ----QRLAATVFENAPEGIFILDHKFRFLAVNTRFEQITGYTESLLIGRRILE-- 448 Query: 605 HITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLV 664 N + I +A E ++ R+G Y ++ + I V + Sbjct: 449 EEGAQANREIYLEITAALLDNGFWEGEINERRRNGEIYPEWLQMSAVRDEQKRVIRYVGM 508 Query: 665 IQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRF 724 + D+T ++ +QL + +++D LT LANR F + L L Q+ AL+ IDLDRF Sbjct: 509 MSDLTARKETEQQLQFLSNYDRLTGLANRTQFREHLHKSLTLARLNRQKVALLMIDLDRF 568 Query: 725 KAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE-SARFIATR 783 K +N+S GH GD LL+ A M + LAR+GGDEF LLL + E S + Sbjct: 569 KPINESLGHEIGDRLLKAAAERMAQHAGGQESLARVGGDEFTLLLENHGSEGSISQQCQQ 628 Query: 784 IISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVY 843 +I+A+ F+ +G +GAS GI++ D +A +++Q+D+A Y +K G Y Sbjct: 629 LINAMKK-PFLIDGHELLLGASIGISIFPDTAKEAQSMINQSDMAVYQAKRSGGNNFQFY 687 Query: 844 EPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEG-E 902 A E+ A+ + + I +N+ ++ + + R + +L W Sbjct: 688 RSNMRVASVEQLALETSLR-KAIFKNEFVVHYQPKMN--LASNRITSVEALVRWQHPTMG 744 Query: 903 IIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK--GISISLPLSVAGLSSATLV 960 ++ F + L A+ V +QA K I +S+ LS + Sbjct: 745 LLPPADFIPLAEETGLISAIGELVLERSCRQAHKWQKQGLGEICVSVNLSAHQFRKGNVA 804 Query: 961 NDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFN 1016 + L + L P LL L + I++ E +Q+LR G + L G + Sbjct: 805 ETIDRVLSTTELSPHLLELELTESLIMEDMEQNIELLQQLRSRGVELALDDFGTGYSSLS 864 Query: 1017 SLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSG 1076 LK D L +D + N D + I A L M IA V + L Sbjct: 865 YLKRFPVDTLKIDRSFIMELDKNPDDAAITRAIIDMAHSLKMNVIAEGVETADHLSILRD 924 Query: 1077 IGVDLIYGEVIADAQP----LDLLVNSSYFAI 1104 + D I G +I+ P L+LL +Y Sbjct: 925 MHCDSIQGYLISRPVPESELLELLHTQAYRDA 956 >UniRef50_Q88LF0 Sensory box protein n=16 Tax=Proteobacteria RepID=Q88LF0_PSEPK Length = 1136 Score = 650 bits (1676), Expect = 0.0, Method: Composition-based stats. Identities = 168/833 (20%), Positives = 311/833 (37%), Gaps = 42/833 (5%) Query: 290 FRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGL--TF 347 + + + +S+ A++ + +G L + Q G F Sbjct: 309 RKRAEQALKDSQERLDLALDSAQLGTWDWHIPSGMLYGSARAAQLHGLPPIPFHESFDAF 368 Query: 348 QQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYF 407 + + N Q L G Y + R NG + L R G PL Sbjct: 369 FEGVPEHERNSMRQAYRSLREGPAGNYQITYRVQLENGTSRYIESRARLYRDDQGIPLRM 428 Query: 408 IAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIF-SWDKRMFELYEIPP 466 + DI + EQ E+ + I F + + + Sbjct: 429 AGTLLDITDQVEREQRLSASEEKFASLFQVSPDPICVTRQDTGQFIEINPAFTQTFGWSS 488 Query: 467 H-----IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALAN 521 +W E V E + E+VIR+ S L R +++ Sbjct: 489 AQVLGRTAEEIGLWAESV--ERAKRIEQVIREQALSNVAVVLNHRNGDPLT----CVISS 542 Query: 522 RVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCID-MAMKITFM 580 R++ + + + D+T+ ++ AL +E+ S +A+ + + + + Sbjct: 543 RLITVDDQPCSVT-TLRDITQQQRAEAALKSSEEKFAKAFHSSPDAITITERHSGRYLEV 601 Query: 581 NPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVL-HCRSG 639 N +++G++ +E +G TV I + + + R + +L + G Sbjct: 602 NDGFCRLTGYSTDEVIGH---TVYEIGIWADDKQRSALLAELRERGRVHHREMLGRNKRG 658 Query: 640 GSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQ 699 V S+ P++ + +L +DV++ + Q+ + A HD LT+L NRA + Sbjct: 659 DILTVEVSVEPITLNE--VDCLLLTARDVSQLKNAQAQIRHLAYHDPLTNLPNRALLMDR 716 Query: 700 LRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLAR 759 L + + + R AL+F+DLD FK +NDS GH GD +L+ + + + + +R D +AR Sbjct: 717 LSQQIALLKRHNLRGALLFLDLDHFKHINDSLGHPVGDTVLKIITARLEASVRLEDTVAR 776 Query: 760 LGGDEFGLLLPDCN------VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDD 813 LGGDEF +LL E R +A + + + +G+ +V S G+ LI D Sbjct: 777 LGGDEFVVLLSGLEGSREHVEEKVRELADTLRELLAE-PMSLDGQRLQVTPSIGVALIPD 835 Query: 814 NNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMM 873 + A+++ +ADIA Y +K+ GR ++ A SER M D + + +L + Sbjct: 836 HGTTPADLLKRADIALYRAKDSGRNTTQLFHTTMQKAASERLRMENDLRL-ALARGELAL 894 Query: 874 LAHGVASPRIPEARNLWLISLKLWSCEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQ 932 R + R + L W F + + L + + E Sbjct: 895 HFQPQVDAR--DNRIVGAEVLLRWHHPQLGQQPPSQFIQVLEESGLILEVGSWILDEACD 952 Query: 933 QAAKAV-----ASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAIL 987 A+ + + ++ + +S V +L L++ LP ++L L I ++ Sbjct: 953 ACARMLTDGLIDADDFNLCVNISPRQFRQNDFVGRVLRSLDDYRLPRQMLTLEITEGIVI 1012 Query: 988 DHAE----SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDE 1043 + E + +L+ G + G LK D L +D + + D Sbjct: 1013 QNLEDTISKMCELKRYGVSFAMDDFGTGYSSLTYLKRLPVDALKIDQSFVRDAPVDPNDA 1072 Query: 1044 MLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 ++ I A+ L + IA V L + L +G L G + + PL Sbjct: 1073 EIVRAIVAMARSLDLAVIAEGVELTEQLAFLERLGCHLYQGYLHSRPLPLPEF 1125 Score = 177 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 72/401 (17%), Positives = 153/401 (38%), Gaps = 20/401 (4%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALV-GTEGQWLQTNKALCQFLGYSQEELRGL 345 + R + SE F S + L +G + N+ G+ ++ G Sbjct: 181 ITRQRERETALINSEKRFATLFHLSPNAILLTRRRDGMIFEVNQHFEDMFGWPGSQVIGK 240 Query: 346 TFQQL---TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDG 402 T +L PE ++ ++ ME ++ +G V +L + Sbjct: 241 TSLELGLWVNPEQRHQIVESTRA----NGGPLIMEVQFRATSGKVHDGILCTQGIELEG- 295 Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELY 462 + I+ D E KR EQ + ER+ LA ++ +G W+W + + R +L+ Sbjct: 296 -VTFLISTFVDTTERKRAEQALKDSQERLDLALDSAQLGTWDWHIPSGMLYGSARAAQLH 354 Query: 463 EIPP-HIKPNWQVWYECVLPEDRQHAEKVIRDSLQS-RSPFKLEFRITVKD-GIRHIRAL 519 +PP ++ ++E V +R + R + +++ +R+ +++ R+I + Sbjct: 355 GLPPIPFHESFDAFFEGVPEHERNSMRQAYRSLREGPAGNYQITYRVQLENGTSRYIESR 414 Query: 520 ANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMA-MKIT 578 A + +G R+ G +D+T+ + + L +E+ + + + Sbjct: 415 ARLYRDDQGIPLRMAGTLLDITDQVEREQRLSASEEKFASLFQVSPDPICVTRQDTGQFI 474 Query: 579 FMNPVAEKMSGWTQEEALGVPLLTV-LHITFGDNGPLMENIYSADTSRSAIEQDVVLHCR 637 +NP + GW+ + LG + L + +E + + VVL+ R Sbjct: 475 EINPAFTQTFGWSSAQVLGRTAEEIGLWAESVERAKRIEQVIREQALSNVA---VVLNHR 531 Query: 638 SGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQL 678 +G S ++ D SV ++D+T+ ++ L Sbjct: 532 NGDPLTCVISSRLITVDDQP--CSVTTLRDITQQQRAEAAL 570 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 71/395 (17%), Positives = 129/395 (32%), Gaps = 19/395 (4%) Query: 298 SESETHFRNA------MEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQ--Q 349 ESE ++NA + + +G L E + ++ G+ + Sbjct: 58 QESEQAWQNAPQLLAALNGAHLGAWLWDIESGRVSWSRGTQALFGFDPQRPLPADIDYLD 117 Query: 350 LTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIA 409 L ED + Q + +++GE +M R +G + W + SL G P I Sbjct: 118 LLPEEDRARTRQVFQAVVNGEPVEQAMRHRIRWPDGSLHWLEINGSLTHDPHGRPQ-MIG 176 Query: 410 QIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPN-IFSWDKRMFELYEIPPH- 467 I +I + E +R I + IF ++ +++ P Sbjct: 177 VIREITRQRERETALINSEKRFATLFHLSPNAILLTRRRDGMIFEVNQHFEDMFGWPGSQ 236 Query: 468 -IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNK 526 I V PE R + R + P +E + G H L + + Sbjct: 237 VIGKTSLELGLWVNPEQRHQIVESTRA---NGGPLIMEVQFRATSGKVHDGILCTQGIEL 293 Query: 527 EGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEK 586 EG V L+ +D TE K+ +AL +ERL + LDS + + + + A + Sbjct: 294 EG-VTFLISTFVDTTERKRAEQALKDSQERLDLALDSAQLGTWDWHIPSGMLYGSARAAQ 352 Query: 587 MSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCR--SGGSYDV 644 + G M Y + A + + +G S + Sbjct: 353 LHGLPPIPFH-ESFDAFFEGVPEHERNSMRQAYRSLREGPAGNYQITYRVQLENGTSRYI 411 Query: 645 HYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLS 679 G + + D+T+ + ++LS Sbjct: 412 ESRARLYRDDQGIPLRMAGTLLDITDQVEREQRLS 446 Score = 93.4 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 57/379 (15%), Positives = 137/379 (36%), Gaps = 26/379 (6%) Query: 278 LPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTE-GQWLQTNKALCQFLG 336 L + + + +S SE F + + S + + + GQ+++ N A Q G Sbjct: 426 LRMAGTLLDITDQVEREQRLSASEEKFASLFQVSPDPICVTRQDTGQFIEINPAFTQTFG 485 Query: 337 YSQEELRGLTFQQL-TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVS 395 +S ++ G T +++ W E + + +++E++I E ++ +RNGD + +++ Sbjct: 486 WSSAQVLGRTAEEIGLWAESVER-AKRIEQVIR-EQALSNVAVVLNHRNGDPLTCVISSR 543 Query: 396 LVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNI-FSW 454 L+ D + + DI + +R E + E+ A + I E Sbjct: 544 LITVDDQPCS--VTTLRDITQQQRAEAALKSSEEKFAKAFHSSPDAITITERHSGRYLEV 601 Query: 455 DKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIR 514 + L V+ + +D+Q + + L+ R + Sbjct: 602 NDGFCRLTGYSTDEVIGHTVYEIGIWADDKQRS--ALLAELRERGRVHHREMLGRNKRGD 659 Query: 515 HIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMA 574 + + EV+ LL D++++K + + ++ Sbjct: 660 ILTVEVSVEPITLNEVDCLLLTARDVSQLKNAQAQIRHLAYHDPL-----------TNLP 708 Query: 575 MKITFMNPVAEKMSGWTQEEALG----VPLLTVLHITFGDNGPLMENIYSADTSR--SAI 628 + M+ ++++++ + G + L HI P+ + + T+R +++ Sbjct: 709 NRALLMDRLSQQIALLKRHNLRGALLFLDLDHFKHINDSLGHPVGDTVLKIITARLEASV 768 Query: 629 EQDVVLHCRSGGSYDVHYS 647 + + G + V S Sbjct: 769 RLEDTVARLGGDEFVVLLS 787 >UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Clostridium thermocellum RepID=A3DCG7_CLOTH Length = 862 Score = 649 bits (1675), Expect = 0.0, Method: Composition-based stats. Identities = 152/633 (24%), Positives = 267/633 (42%), Gaps = 23/633 (3%) Query: 481 PEDRQHAEKVIRDSLQSRSPFKLEFR---ITVKDGIRH---IRALANRVLNKEGEVERLL 534 PE ++ + + DS++ ++ +R + D R IR A + + Sbjct: 218 PELVKYINERL-DSVKKNGIYEQLYRKHFLRPSDFYRRKQRIRNFAAMLALLVLLALLQV 276 Query: 535 GINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEE 594 I ++ + L ++ E L ITL SIGEAV+ D +TF N +KM G ++EE Sbjct: 277 YIRHLKKKISKAYRELRKQHEWLRITLSSIGEAVITTDENGTVTFSNYEIQKMLGLSEEE 336 Query: 595 ALGVPLLTVLHITFGDNGPLMENIYSADTSRSA---IEQDVVLHCRSGGSYDVHYSITPL 651 LG L +L + + +R + +E D+ L GG V ++ P+ Sbjct: 337 ILGKKLDKLLSGLVDKREKVYKIPIEEVVNRGSMIKLETDLSLVTP-GGRRLVEGTVAPI 395 Query: 652 STLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTH 711 IG+V+ ++D+TE +K L +D LT L NR+ F +L++ L + Sbjct: 396 RNDSDVIIGTVVALKDITEIKKKDEILYNMEYYDPLTGLPNRSLFSDRLKMALAQSKRNN 455 Query: 712 QRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD 771 + AL+ +DLD FKA+ND+ GH+ GD LL+++A + LR D +AR+GGDEF ++ P Sbjct: 456 EMCALIILDLDNFKAINDTLGHSVGDMLLKQVAEKIKGYLREVDTVARIGGDEFIIIQPQ 515 Query: 772 C-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACY 830 ++ A A RI+ +I EG+ + + AS GI + + + AD A Y Sbjct: 516 IKDINDATRAADRILKKFQQ-PWILEGKEYYITASMGIGIYPNGGEDPQTIFKNADTALY 574 Query: 831 ASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLW 890 +K GR +Y +R + + R I++ + ++ I + + Sbjct: 575 RAKELGRNNYQLYTESMNQKVLQRLDIE-NSLRRAIEKEEFVLFYQPQID--IKTGKIVG 631 Query: 891 LISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV--ASKGISISL 947 +L W + ++ F D L + V +Q K + + IS+ Sbjct: 632 FEALLRWYHPDYGLMPPMEFIPVAEDSGLIVVIGEWVLETACRQNKKWIECGLEPHLISV 691 Query: 948 PLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH----AESVQKLRLAGCRI 1003 LS + +V + ++ L P LL L I + + + +LR G R+ Sbjct: 692 NLSARQFQRSNIVEVIDRIRSSTGLAPELLELEITESTAMQDLSFTIDVLNQLRKKGIRV 751 Query: 1004 VLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAG 1063 L G N L+ D L +D +++ N +E + + A +L + +A Sbjct: 752 SLDDFGTGYSSLNYLRQLPIDTLKIDKSFVQDIRANSKEEAIAKTVISLAHKLDLTVVAE 811 Query: 1064 PVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 V + L D G + + P + + Sbjct: 812 GVETKEQLLFLKKEKCDKAQGYLFSKPLPAEEI 844 Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 56/162 (34%), Gaps = 9/162 (5%) Query: 277 LLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLG 336 + ++ + A+R RK R + + G +N + + LG Sbjct: 276 VYIRHLKKKISKAYRELRKQH----EWLRITLSSIGEAVITTDENGTVTFSNYEIQKMLG 331 Query: 337 YSQEELRGLTFQQLTWP--EDLNKDLQQV--EKLISGEINTYSMEKRYYNRNGDVVWALL 392 S+EE+ G +L + K + E + G + + G Sbjct: 332 LSEEEILGKKLDKLLSGLVDKREKVYKIPIEEVVNRGSMIKLETDLSLVTPGGR-RLVEG 390 Query: 393 AVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLA 434 V+ +R+ + + ++DI E+K+ +++ + L Sbjct: 391 TVAPIRNDSDVIIGTVVALKDITEIKKKDEILYNMEYYDPLT 432 >UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria RepID=Q1NRJ4_9DELT Length = 1052 Score = 649 bits (1675), Expect = 0.0, Method: Composition-based stats. Identities = 140/709 (19%), Positives = 269/709 (37%), Gaps = 26/709 (3%) Query: 408 IAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPH 467 +A + D+ L + N+ + + I + I +W++ L+ Sbjct: 354 LASLADLIALGLERKQNENRLLTQARIVDQIRDAIITTDPAGLIMTWNQGAQRLFGYTAQ 413 Query: 468 IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKE 527 + + + + P + + + L+ R +++E + K G R + + E Sbjct: 414 EASHRPLSF-LLAPHELDFYQGQVLPQLRERLSYQIEIEVQTKHGDRRFADFSLTQFSPE 472 Query: 528 G---EVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVA 584 G ++ D+TE ++ E + L+ EAVV D +I +N Sbjct: 473 GGGSTRGGIICYARDITERQKREERMRLSSR----FLEDTNEAVVITDADARIIEVNRAF 528 Query: 585 EKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDV 644 EK++G++++EA+G + + + ++ + E ++ ++ + Sbjct: 529 EKLTGYSRQEAIGQNPRILQSGHY--DADFYREMWDTLLTTGHWEGELWSRRKNNELHPK 586 Query: 645 HYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILL 704 SI+ + G V + D+T +++ +L +D LT L N F +L+ + Sbjct: 587 WLSISAVYDQRGRITHYVGISNDLTATKQTQEKLEELTHYDQLTSLPNILLFRDRLQQAM 646 Query: 705 QTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDE 764 + AL+ DLDRFK VNDS GH+ GD +L E+A + L +D + R GGDE Sbjct: 647 ARARREEHKVALLIFDLDRFKEVNDSLGHSVGDLVLTEVAQRLRQQLSLADTICRPGGDE 706 Query: 765 FGLLL-PDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMS 823 F LLL ++++A A ++ + F + S GITL D+ + ++ Sbjct: 707 FYLLLGRLTDIDTAVQAAQNVLELFSK-PFQAADHQLYLTPSIGITLFPDDGEEVESLIQ 765 Query: 824 QADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRI 883 + A Y +K G ++ A R M + R ++ + + + Sbjct: 766 SVETAMYHAKKDGGNSFQFFQETMFTAALGRMTMK-NRLRRAVELEEFELYYQPKIA--A 822 Query: 884 PEARNLWLISLKLW--SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQ--AAKAVA 939 + +L W G + F + L + V + +Q + Sbjct: 823 DGRTVVGAEALIRWVQPERGGPVSPAEFIPLAEETGLIIPIGEWVLRQACRQSLLWQQAG 882 Query: 940 SKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQ----K 995 + I++ LS L +++ L+ LP LL L I +++ + K Sbjct: 883 LPPLRIAVNLSAVQFKQPGLDDEINWILQEIGLPAELLELEITESLLMEDVTTANATLWK 942 Query: 996 LRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQR 1055 L+ G + L G + LK D L +D E ++ + D +I I A Sbjct: 943 LKDMGIHLALDDFGTGYSSLSYLKNFPLDTLKIDREFVRDLSTDDEDRAVIITIITLAHS 1002 Query: 1056 LGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQP---LDLLVNSSY 1101 L M+ +A V + L G D+ G + P + + S Sbjct: 1003 LKMEVVAEGVEDADQVAFLRQRGCDVFQGYHFSRPLPAKEFEQFLRSQN 1051 Score = 118 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 76/450 (16%), Positives = 161/450 (35%), Gaps = 45/450 (10%) Query: 282 IMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEE 341 ++ + + R ++ + S + R A + + +G + Q L + L + G E Sbjct: 63 LILHQIQSHRRVQQELMVSSSQLRKAQQIAKMGHWEWKHDDQPLHWSAELYRIFGQDPES 122 Query: 342 LRGLTFQQL-TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHT 400 L T PED + +Q+ E Y + R NG L+R Sbjct: 123 YTPDYQAFLATIPEDDRRQVQEAVAHTQREGVPYDITHRIRLPNGREKIIHERGELIRDE 182 Query: 401 DGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSW------ 454 G P+ + +D+ K+ E+ Q + + L E G + L+ N+ + Sbjct: 183 QGRPVKMMGTAQDVTAQKQAEEELQNRLRLLALNAEMGMALTQDRSLEANLQTCCQALVN 242 Query: 455 --DKRMFELYEIPPH-----------IKPNWQVWYECVLPEDRQHAEK-VIRDSLQSRSP 500 D + ++ IP H ++ + V + R + + + Sbjct: 243 HLDAALARIWLIPDHESVLLLAASAGLETRLDGEFSRVPIDPRTKIGDIALHRQPRVSNQ 302 Query: 501 FKLEFRITVKDGIRH--IRALANRVLNKEGEVERLLGINM----------------DMTE 542 + +I + ++ ++ +A + L G+V +L + D+ Sbjct: 303 LLNDPQIRNPEWVKANGLQGMAGQPLEVAGKVVGVLALFTRYRLPASISDSLASLADLIA 362 Query: 543 VKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLT 602 + + +D I +A++ D A I N A+++ G+T +EA PL Sbjct: 363 LGLERKQNENRLLTQARIVDQIRDAIITTDPAGLIMTWNQGAQRLFGYTAQEASHRPLSF 422 Query: 603 VLHITFGDNGPLME-NIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNI-- 659 +L D + + R + + ++ + + G +S+T S G + Sbjct: 423 LLAPHELD---FYQGQVLPQLRERLSYQIEIEVQTKHGDRRFADFSLTQFSPEGGGSTRG 479 Query: 660 GSVLVIQDVTESRKMLRQLSYSASHDALTH 689 G + +D+TE +K ++ S+ T+ Sbjct: 480 GIICYARDITERQKREERMRLSSRFLEDTN 509 Score = 95.7 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 67/162 (41%), Gaps = 2/162 (1%) Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELY 462 T L F + I +R +Q ++ A + +G WEW+ W ++ ++ Sbjct: 57 TNLIFWLILHQIQSHRRVQQELMVSSSQLRKAQQIAKMGHWEWKHDDQPLHWSAELYRIF 116 Query: 463 EIPPH-IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVK-DGIRHIRALA 520 P P++Q + + +DR+ ++ + + + P+ + RI + + I Sbjct: 117 GQDPESYTPDYQAFLATIPEDDRRQVQEAVAHTQREGVPYDITHRIRLPNGREKIIHERG 176 Query: 521 NRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLD 562 + +++G +++G D+T KQ E L L + + Sbjct: 177 ELIRDEQGRPVKMMGTAQDVTAQKQAEEELQNRLRLLALNAE 218 Score = 89.6 bits (221), Expect = 7e-16, Method: Composition-based stats. Identities = 55/326 (16%), Positives = 111/326 (34%), Gaps = 11/326 (3%) Query: 250 MAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAME 309 MA P +A +++ + + + A ERK ++ Sbjct: 323 MAGQPLEVAGKVVGVLALFTRYRLPASISDSLASLADLIALGLERKQNENRLLTQARIVD 382 Query: 310 YSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISG 369 + G + N+ + GY+ +E L P +L+ QV + Sbjct: 383 QIRDAIITTDPAGLIMTWNQGAQRLFGYTAQEASHRPLSFLLAPHELDFYQGQVLPQLR- 441 Query: 370 EINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY--FIAQIEDINELKRTEQVNQQL 427 E +Y +E ++GD +A +++ G I DI E ++ E+ + Sbjct: 442 ERLSYQIEIEVQTKHGDRRFADFSLTQFSPEGGGSTRGGIICYARDITERQKREERMRLS 501 Query: 428 MERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHA 487 + NEA + + I ++ +L D Sbjct: 502 SRFLEDTNEA----VVITDADARIIEVNRAFEKLTGYSRQEAIGQNPRILQSGHYD-ADF 556 Query: 488 EKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA-NRVLNKEGEVERLLGINMDMTEVKQL 546 + + D+L + ++ E K+ H + L+ + V ++ G + +GI+ D+T KQ Sbjct: 557 YREMWDTLLTTGHWEGELWSRRKNNELHPKWLSISAVYDQRGRITHYVGISNDLTATKQT 616 Query: 547 NEALFQEKERLHITLDSIGEAVVCID 572 E L + L S+ ++ D Sbjct: 617 QEKLEELTHY--DQLTSLPNILLFRD 640 >UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K2Z8_DESAC Length = 1288 Score = 648 bits (1672), Expect = 0.0, Method: Composition-based stats. Identities = 165/863 (19%), Positives = 314/863 (36%), Gaps = 69/863 (7%) Query: 295 KHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGY--SQEELRGLT---FQQ 349 + E+ ++ + + E ++ TNK+ C+ L S + G F Sbjct: 418 ERHQETARLLQHICDNVPDLIWAKDIEHHYIFTNKSNCRTLLCVDSTDIAIGKNHEFFSD 477 Query: 350 LT---WPED-LNKDLQQVEKLISGEINTYSMEKRYY---NRNGDVVWALLAVSLVRHTDG 402 +PED L ++ E+ R+ + G ++ + + DG Sbjct: 478 KILKEFPEDPLAYQFSELCCQSDSEVLRTRQSMRFQEVGHVKGTLICLDVYKAPFYGADG 537 Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWEL--------------K 448 + + I K+ EQ +L + + + + + Sbjct: 538 ELIGTVGSARIITREKQLEQETMRLSRLYRILSAVNQHIVHKPQPIELFQFVCDTLLEDT 597 Query: 449 PNIFSW---------------DKRMFELYEIPPHIKPNWQVWYEC---VLPEDRQHAEKV 490 +W E+ P H N + E Q Sbjct: 598 TFAMAWIGLPNEMGVYKPVVSSGISLEVLGEPQHCIHNNGQLNHLTTNITAESAQEVLCP 657 Query: 491 IRDSLQSRSPFKLEFRITVK-----DGIRHIRALANRVLNKEGEVERL------LGINMD 539 L RSPF+ ++ + + ++L ++ E + L + +D Sbjct: 658 TGYRLYQRSPFQAVASFPIQPKQAAGALLVVYTQDKKLLEQDDEQQLLDELVQDVAFALD 717 Query: 540 MTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVP 599 + E +Q ++ + D+ E +V D KI +N ++G+ +E LG Sbjct: 718 VHEHEQQQAFSMKQLQLAATVFDNSREGIVLTDKNEKIVSVNRAFSDITGYRDDEVLGQT 777 Query: 600 LLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNI 659 + G + +N++ + ++ + G Y S++ + Sbjct: 778 PRILKSNRHGRD--FYQNMWHCLAEHGCWQGEIWNRRKDGQVYPELMSMSAVCDDQQEVS 835 Query: 660 GSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFI 719 + V D++++++ +L Y + HD LT L NR+ F L ++ H A++ Sbjct: 836 HYIAVFTDISQAKESQEKLDYLSWHDPLTDLPNRSLFCTHLDQAVKHAERKHHSFAVLCF 895 Query: 720 DLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESAR 778 DLD FK VNDS GH GDALLR++A + S LR SD+LARLGGDEF LLL D + Sbjct: 896 DLDHFKDVNDSFGHLVGDALLRKIADRLRSCLRESDMLARLGGDEFVLLLEDVADSHRVT 955 Query: 779 FIATRIISAVNDYHFIWE-GRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGR 837 +A I+ + + E +V S GI + ++ A E++ +AD A Y +K GR Sbjct: 956 MMAEEILHQLQQPICLTETDLEVQVSVSVGIAVYPEHGRDALELLQRADSALYRAKQHGR 1015 Query: 838 GRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW 897 R Y + ER +S + +++ + + + + + +L W Sbjct: 1016 ARFAYYNEEMTEQAQERVQLSF-HLRQALEKKEFAVYYQPQVD--LGTGQIVGAEALMRW 1072 Query: 898 S-CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS--KGISISLPLSVAGL 954 + E ++ F + ++ + + +Q + + +++++ LS Sbjct: 1073 NSPELGLVTPDRFIPLAEEIGCICSMGTWILRQVCEQGKAWLDAGYPPLTLAVNLSAVQF 1132 Query: 955 SSATLVNDLLEQLENSPLPPRLLHLIIPAEAIL----DHAESVQKLRLAGCRIVLSQVGR 1010 + + L E L+ + P L L + ++ + ++ L G R+ L G Sbjct: 1133 AEEDIACRLKETLQETGYPAEYLELEVTESTLMHKEQQTIDLLKSLNELGVRLALDDFGT 1192 Query: 1011 DLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLV 1070 LK L +D ++ + D ++T I LG +A V Sbjct: 1193 GYSSLAYLKYFPLHLLKVDKSFIDDLPADANDCKMVTAIVQMGHGLGFDLLAEGVETVAQ 1252 Query: 1071 MDTLSGIGVDLIYGEVIADAQPL 1093 D L+ +G D G + P Sbjct: 1253 RDCLAQLGCDYYQGYYCSPPVPA 1275 Score = 83.0 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 65/184 (35%), Gaps = 1/184 (0%) Query: 251 AADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEY 310 A ++ T L+ L L+ + ++ ++ + + Sbjct: 682 AGALLVVYTQDKKLLEQDDEQQLLDELVQDVAFALDVHEHEQQQAFSMKQLQLAATVFDN 741 Query: 311 SAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGE 370 S G+ L + + N+A GY +E+ G T + L Q + ++ E Sbjct: 742 SREGIVLTDKNEKIVSVNRAFSDITGYRDDEVLGQTPRILKSNRHGRDFYQNMWHCLA-E 800 Query: 371 INTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMER 430 + E ++G V L+++S V ++IA DI++ K +++ L Sbjct: 801 HGCWQGEIWNRRKDGQVYPELMSMSAVCDDQQEVSHYIAVFTDISQAKESQEKLDYLSWH 860 Query: 431 ITLA 434 L Sbjct: 861 DPLT 864 >UniRef50_A4ACX6 Sensory box/GGDEF/EAL family protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4ACX6_9GAMM Length = 793 Score = 648 bits (1672), Expect = 0.0, Method: Composition-based stats. Identities = 150/798 (18%), Positives = 295/798 (36%), Gaps = 39/798 (4%) Query: 306 NAMEYSAIGMALVGTE-GQWLQTNKALCQFLGYSQEEL-RGLT--FQQLTWPEDLNKDLQ 361 + IG G++ ++ + L +EL G+ Q+ ED+ Sbjct: 6 AVFLEAGIGTWRWDASSGEFQLSDDGIA-MLQVRADELPLGVDTIIGQIL-DEDVAGFQS 63 Query: 362 QVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTE 421 + +LI+ ++ R +GD+ W D + + + D+ + Sbjct: 64 AMAELITAP-GLIEVDFRALLDDGDIRWYRAIGRSYASPDASVTHAAGVLLDVTTQRSA- 121 Query: 422 QVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLP 481 + + + I + + + Q + V P Sbjct: 122 ------EQYYDAFFQQPNGMHLVASIDGEIRLTNSAWQLVLG-HGDAELQGQNLLDLVHP 174 Query: 482 EDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMT 541 EDR+ + Q E R +DG + A + +E + + D++ Sbjct: 175 EDREATLAEMGKLSQGMYTLYFENRYRHRDGSYRVIAWSAATAERESVI---CAVGRDIS 231 Query: 542 EVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLL 601 + A + + + GE ++ D +I +N +++G+++E+A+G P Sbjct: 232 Q----EHAARRGLFQAAAVFKNSGEGILISDKDGRIRDVNAAFSRITGYSREDAIGQPTS 287 Query: 602 TVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGS 661 + + +G +++ ++ +SG + +I+ + DG G Sbjct: 288 LLR--SGRHDGDFYADMWQTLQRDGVWRGEIWNRRKSGTVFPELLTISKIDGPDG---GF 342 Query: 662 VLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDL 721 + + D+++ ++ QL A +D LT+L NR + L ++ A+ F+D+ Sbjct: 343 MAIFTDISQLKETEEQLQKLAHYDPLTNLPNRFLVNECLEHSIRRAQRRSDHLAVFFLDI 402 Query: 722 DRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN-VESARFI 780 D FK +NDS GH AGD LL+ A+ + ++LR D + R+GGDEF ++L D + + A I Sbjct: 403 DSFKNINDSLGHFAGDKLLKTTANRLKALLRDDDSVGRIGGDEFLMVLDDISTPDDATHI 462 Query: 781 ATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRV 840 A +II A+ I EGR V AS GI++ ++ A +MS AD A Y +K+ GR Sbjct: 463 AEKIIGALRK-PMILEGRSISVSASIGISIYPEDGQTAETLMSNADAAMYNAKDQGRDTF 521 Query: 841 TVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSC- 899 Y + + + + + + L L L W Sbjct: 522 RFYSEHLTRQAFQNVLIDSALR-EAVSRQEFRLAFQP--QVNTDNGSLLGLEVLLRWHHL 578 Query: 900 EGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS--KGISISLPLSVAGLSSA 957 + F L + V + Q ++ +A + +++ +S + Sbjct: 579 TLGTVSPSQFIPQAERTGLIRDIGHWVLEQSCLQGSRWIAEGLQFGHLAVNVSAPQFRAE 638 Query: 958 TLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQ 1013 V + + L ++ PP L L + ++ E + +LR G + G Sbjct: 639 DFVAQVRKVLADTEFPPEKLELELTESVLVHDTEKLIENMHELRALGVMFAIDDFGTGYS 698 Query: 1014 IFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDT 1073 + LK D L LD ++ + D ++ + + +G+ IA + Sbjct: 699 SLSYLKRMPIDRLKLDKSFVDHIVSDDSDRIIAGAVLALGKAMGLPVIAEGIEQEAQARV 758 Query: 1074 LSGIGVDLIYGEVIADAQ 1091 L +G G + Sbjct: 759 LQSLGCKHFQGYLYGRPM 776 Score = 92.2 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 51/261 (19%), Positives = 86/261 (32%), Gaps = 13/261 (4%) Query: 297 ISESETHFRNAMEYSAIGMALV-GTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPED 355 S + +A GM LV +G+ TN A LG+ EL+G L PED Sbjct: 117 TQRSAEQYYDAFFQQPNGMHLVASIDGEIRLTNSAWQLVLGHGDAELQGQNLLDLVHPED 176 Query: 356 LNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDIN 415 L ++ KL G Y E RY +R+G + + T A DI+ Sbjct: 177 REATLAEMGKLSQGMYTLY-FENRYRHRDGSYRVIAWSAA----TAERESVICAVGRDIS 231 Query: 416 ELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVW 475 + E ++ + + + G GI + I + + Sbjct: 232 Q----EHAARRGLFQAAAVFKNSGEGILISDKDGRIRDVNAAFSRITGYSREDAIGQPTS 287 Query: 476 YECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLG 535 D + +LQ ++ E K G L + +G + Sbjct: 288 LLRSGRHD-GDFYADMWQTLQRDGVWRGEIWNRRKSGTVFPELL--TISKIDGPDGGFMA 344 Query: 536 INMDMTEVKQLNEALFQEKER 556 I D++++K+ E L + Sbjct: 345 IFTDISQLKETEEQLQKLAHY 365 Score = 73.8 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 63/157 (40%), Gaps = 12/157 (7%) Query: 284 TMVMYAFRAERKHISESETHFRNA--MEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEE 341 +++ R + + F+ A + S G+ + +G+ N A + GYS+E+ Sbjct: 221 SVICAVGRDISQEHAARRGLFQAAAVFKNSGEGILISDKDGRIRDVNAAFSRITGYSRED 280 Query: 342 LRGLT---FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVR 398 G + D D+ Q + + E ++G V LL +S + Sbjct: 281 AIGQPTSLLRSGRHDGDFYADMWQTLQ----RDGVWRGEIWNRRKSGTVFPELLTISKID 336 Query: 399 HTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLAN 435 DG F+A DI++LK TE+ Q+L L N Sbjct: 337 GPDG---GFMAIFTDISQLKETEEQLQKLAHYDPLTN 370 >UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47BF2_DECAR Length = 1038 Score = 648 bits (1672), Expect = 0.0, Method: Composition-based stats. Identities = 136/714 (19%), Positives = 272/714 (38%), Gaps = 31/714 (4%) Query: 402 GTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFEL 461 G I + + L R++++ + ++ G G++ + + + E+ Sbjct: 326 GLSTLLILSMLAVAYLIRSKRLVGAALRERASLLDSLGEGVYGIDQNGQCTFINPKALEM 385 Query: 462 YEIPPHIKPNWQVWYECVLPED----RQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIR 517 A+ + +L+ + E KDG Sbjct: 386 LGWTADEVIGSDQHARFHHHRPDGSIYPSADCPVYQTLRDGQRRQGEEWFFNKDGRGFPV 445 Query: 518 ALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKI 577 + ++++ + E + D++E ++ +E + + EA++ D +I Sbjct: 446 QYSVTPISRQEDKEGAVVTFRDISEARKADELMR-----IAAIAFETQEAMLVTDAKSQI 500 Query: 578 TFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCR 637 +N +++G++ EA+G + D+ ++++++ ++ + Sbjct: 501 LRVNRAFTEVTGYSAAEAIGQTPALLKSGYHEDS--FYKDLWTSLKENGLWRGEIWNRRK 558 Query: 638 SGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFE 697 +G Y +I+ + G V D+T+ ++ Q+ + A +D LTHL NR Sbjct: 559 NGEIYPEWLTISAVRGQHGEITHFVSSFLDITKRKEAEEQIQFLALYDPLTHLPNRRLLN 618 Query: 698 KQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVL 757 ++L L + + AL+FIDLD FK +NDS GH GD LLR++A + +RS+D + Sbjct: 619 ERLSKALTSSGRQRRHAALLFIDLDNFKMINDSMGHDIGDLLLRQVALRLRESVRSNDTV 678 Query: 758 ARLGGDEFGLLLPDCNVE------SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLI 811 +RLGGDEF +LL + + IA +++ ++ + + H AS G Sbjct: 679 SRLGGDEFVILLEELSPNIHDATTQIEHIAQKMLDSLVQ-PYKFGEFSHHCTASIGAIPF 737 Query: 812 DDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQL 871 D ++ AD+A Y +K G+ R+ ++P RAA+ D + + +E Q Sbjct: 738 MDATETIESLLKSADMAMYKAKAAGKNRLFFFDPAMQTEVEARAALERDLR-QAQREKQF 796 Query: 872 MMLAHGVASPRIPEARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEF 930 ++ +L W +I F + L + + V E Sbjct: 797 VLYLQPQVD---QSGHVSGAEALIRWQHPTHGLILPGEFTHVAEETRLILPIGQWVLEEA 853 Query: 931 FQQA---AKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAIL 987 +Q K + +++++ +S + V+D+ + S L L I +L Sbjct: 854 CKQLVIWQKNPDTAHLTLAINVSALQFRNPDFVDDVARAIHESGALASRLKLEITESLLL 913 Query: 988 DH----AESVQKLR-LAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMD 1042 + E +Q L+ G + L G + LK D + +D ++ N D Sbjct: 914 EDIDGTIERMQVLKNQLGVGLSLDDFGTGYSSLSYLKQLPLDQIKIDRSFVKDIHCNPND 973 Query: 1043 EMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 + + + + IA V D L G G + P+D Sbjct: 974 AAIAEAVIALGRSFSLNVIAEGVETIEQRDALIARGCLTFQGYLFGRPGPIDAF 1027 Score = 85.7 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 43/286 (15%), Positives = 102/286 (35%), Gaps = 24/286 (8%) Query: 275 LILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQF 334 L++L + ++ + R + E + ++ G+ + GQ N + Sbjct: 330 LLILSMLAVAYLIRSKRLVGAALRERA----SLLDSLGEGVYGIDQNGQCTFINPKALEM 385 Query: 335 LGYSQEELRG--LTFQQLTWPED----LNKDLQQVEKLISGEINTYSMEKRYYNRNGDVV 388 LG++ +E+ G + D + D + L G+ E+ ++N++G Sbjct: 386 LGWTADEVIGSDQHARFHHHRPDGSIYPSADCPVYQTLRDGQRR--QGEEWFFNKDGRGF 443 Query: 389 WALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELK 448 +V+ + + + DI+E ++ +++ RI + + K Sbjct: 444 PVQYSVTPISRQEDKE-GAVVTFRDISEARKADEL-----MRIAAIAFETQEAMLVTDAK 497 Query: 449 PNIFSWDKRMFELYEIP--PHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFR 506 I ++ E+ I + + K + SL+ ++ E Sbjct: 498 SQILRVNRAFTEVTGYSAAEAIGQTPALLKSGYHEDS---FYKDLWTSLKENGLWRGEIW 554 Query: 507 ITVKDGIRHIRALA-NRVLNKEGEVERLLGINMDMTEVKQLNEALF 551 K+G + L + V + GE+ + +D+T+ K+ E + Sbjct: 555 NRRKNGEIYPEWLTISAVRGQHGEITHFVSSFLDITKRKEAEEQIQ 600 Score = 69.1 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 60/388 (15%), Positives = 130/388 (33%), Gaps = 33/388 (8%) Query: 283 MTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEEL 342 +V + +E + E A E + M + + Q L+ N+A + GYS E Sbjct: 460 GAVVTFRDISEARKADELMRIAAIAFE-TQEAMLVTDAKSQILRVNRAFTEVTGYSAAEA 518 Query: 343 RGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDG 402 G T L + + + + E + E +NG++ L +S VR G Sbjct: 519 IGQTPALLKSGYHEDSFYKDLWTSLK-ENGLWRGEIWNRRKNGEIYPEWLTISAVRGQHG 577 Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELY 462 +F++ DI + K E+ Q L L + + E + R Sbjct: 578 EITHFVSSFLDITKRKEAEEQIQFLALYDPLTHLPNRRLL--NERLSKALTSSGRQRRHA 635 Query: 463 EIPPHIKPNWQVWYECVLPE----DRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRA 518 + N+++ + + + + +R+S++S R+ + + + Sbjct: 636 ALLFIDLDNFKMINDSMGHDIGDLLLRQVALRLRESVRSNDTVS---RLGGDEFVILLEE 692 Query: 519 LANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKIT 578 L+ + + ++E + + + + + A+ +D I Sbjct: 693 LSPNIHDATTQIEH-------IAQKMLDSLVQPYKFGEFSHHCTASIGAIPFMDATETIE 745 Query: 579 FMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRS 638 + A M+ + + A G L + + +R+A+E+D+ R Sbjct: 746 SLLKSA-DMAMYKAK-AAGKNRLFFFDP----------AMQTEVEARAALERDLRQAQRE 793 Query: 639 GGSYDVHYSITPLSTLDGSNIGSVLVIQ 666 + P G G+ +I+ Sbjct: 794 KQFV---LYLQPQVDQSGHVSGAEALIR 818 >UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YY70_9NEIS Length = 1054 Score = 648 bits (1671), Expect = 0.0, Method: Composition-based stats. Identities = 135/547 (24%), Positives = 241/547 (44%), Gaps = 13/547 (2%) Query: 560 TLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIY 619 D+ +A+V D + I +N ++G++ +EA+G + + + ++ Sbjct: 505 IFDTSSQAIVISDASNHIVMVNRAFTDITGYSAQEAIGRQPSLL--SSGRQPPAFYQKMW 562 Query: 620 SADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLS 679 R ++ + G Y SI+ L G V + D++E ++ + Sbjct: 563 QQLAQRGHWAGEIWNRRKDGTIYPEWLSISLLRDEAGQVSHHVALFSDISERKEQEAHIR 622 Query: 680 YSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDAL 739 + A HD LT L NRA +L ++ R A++F+DLD FK +ND+ GHA GD L Sbjct: 623 HMAEHDFLTDLPNRALIHDRLAQAIRAAARQKNRLAVLFLDLDHFKNINDTLGHAHGDEL 682 Query: 740 LRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGR 798 L+++A + +R SD + R GGDEF L++P+ + A +A R++ + F +G+ Sbjct: 683 LKQVAQRLQHTVRGSDTVGRNGGDEFVLIVPELASPAEAAQLAQRLLDDLRR-PFQIDGQ 741 Query: 799 VHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMS 858 + S GI+L DN + E++ AD+A Y +K GR R + P+ A +ER + Sbjct: 742 ALAISTSIGISLFPDNGSELQELLVSADLAMYHAKAQGRNRYQFFTPELNAQVAERLTLE 801 Query: 859 LDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPA 917 + + ++ QL ++ I R + +L W E +I F + Sbjct: 802 -NHLRQALERQQLYLVYQP--QFAIDNRRLVGCEALLRWQHPEQGLISPARFIPLAEETG 858 Query: 918 LSHALDRRVFHEFFQQAAKAVASK-GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRL 976 L + R V E +QAA +A+ + +++ +S L L+ ++ L LP Sbjct: 859 LIVEIGRWVLDEACRQAAAWLAAGTPLRVAVNVSARQLGQPDLLAEVEAALARHRLPSCW 918 Query: 977 LHLIIPAEAILDHAE----SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGEL 1032 L L + +++ AE +Q + G + + G LK D + +D Sbjct: 919 LELEVTESTLMEDAEQAVRHLQAFKERGIHLAVDDFGTGYSSLTYLKRFSPDLIKIDRAF 978 Query: 1033 CANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQP 1092 N+ N D +++ I A+ LGM+T+A V +D L+ G D++ G + Q Sbjct: 979 VMNLPDNRDDAAIVSAIVQLAEALGMQTLAEGVESEEQLDFLAQAGCDVVQGYLTGRPQS 1038 Query: 1093 LDLLVNS 1099 L Sbjct: 1039 AGELTAQ 1045 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 44/282 (15%), Positives = 97/282 (34%), Gaps = 12/282 (4%) Query: 307 AMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKL 366 + S+ + + + N+A GYS +E G L+ Q++ + Sbjct: 505 IFDTSSQAIVISDASNHIVMVNRAFTDITGYSAQEAIGRQPSLLSSGRQPPAFYQKMWQQ 564 Query: 367 ISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQ 426 ++ + ++ E ++G + L++SL+R G + +A DI+E K E + Sbjct: 565 LA-QRGHWAGEIWNRRKDGTIYPEWLSISLLRDEAGQVSHHVALFSDISERKEQEAHIRH 623 Query: 427 LMERITLANEAGGIGIWE--WELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPED- 483 + E L + I + + R+ L+ H K N ++ Sbjct: 624 MAEHDFLTDLPNRALIHDRLAQAIRAAARQKNRLAVLFLDLDHFK-NINDTLGHAHGDEL 682 Query: 484 RQHAEKVIRDSLQSRSPFKL----EFRITVKDGIRHIRA--LANRVLNKEGEVERLLGIN 537 + + ++ +++ EF + V + A LA R+L+ ++ G Sbjct: 683 LKQVAQRLQHTVRGSDTVGRNGGDEFVLIVPELASPAEAAQLAQRLLDDLRRPFQIDGQA 742 Query: 538 MDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITF 579 + ++ L L S A+ + + Sbjct: 743 LAISTS-IGISLFPDNGSELQELLVSADLAMYHAKAQGRNRY 783 Score = 43.7 bits (102), Expect = 0.045, Method: Composition-based stats. Identities = 41/312 (13%), Positives = 89/312 (28%), Gaps = 33/312 (10%) Query: 246 VSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFR 305 +S L + + W+ L+ ++ + R + S R Sbjct: 348 ISATGLITLLALLSAVLFSWWLNRWIKGLIAHYHRDLEHSLEELGERSRD-LQLS----R 402 Query: 306 NAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEK 365 ++++ + L+ +G N A LG + RG L P D L Sbjct: 403 FMTDHASDVVLLLDEDGAPRYLNAAAAALLGDDPAQ-RGPRLAALLPPSDQPLPLTYETV 461 Query: 366 LISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQ 425 L V ++++ +++ D A Q + Sbjct: 462 LDD-------------------VPFEVSLTSMQYQD------HAYRSLRARDMSRRQQAE 496 Query: 426 QLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQ 485 Q + I + +I ++ ++ Q Sbjct: 497 QQQRLAAKIFDTSSQAIVISDASNHIVMVNRAFTDITGYSAQEAIGRQPSL-LSSGRQPP 555 Query: 486 HAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA-NRVLNKEGEVERLLGINMDMTEVK 544 + + L R + E KDG + L+ + + ++ G+V + + D++E K Sbjct: 556 AFYQKMWQQLAQRGHWAGEIWNRRKDGTIYPEWLSISLLRDEAGQVSHHVALFSDISERK 615 Query: 545 QLNEALFQEKER 556 + + E Sbjct: 616 EQEAHIRHMAEH 627 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 647 bits (1670), Expect = 0.0, Method: Composition-based stats. Identities = 171/900 (19%), Positives = 318/900 (35%), Gaps = 118/900 (13%) Query: 295 KHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQ---LT 351 +++ + E ++ ++ A + T+G L N+ + EE+ G + Sbjct: 55 ENLKQEEQGLKDYIDNLITLNAKLSTDGTVLLINETALRTFHMQPEEVVGKKLWDTPWWS 114 Query: 352 WPEDLNKDLQ-QVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQ 410 + DL+ L+ V++ +G+ Y E + +G ++ ++ V + + +Y +A+ Sbjct: 115 YDADLHTQLKNAVKQAATGQTIYY--ETINHLVSGKKIYIYFTLNPVLNKNNEVIYLVAE 172 Query: 411 IEDINEL----------------------------KRTEQVNQQLMERITLANEAGGIGI 442 DI + + + + ER+ E+ Sbjct: 173 GRDITKRKMIEQDLISTNQELVAANEELISIEEELRISNKEIYLAHERLNNILESITDAF 232 Query: 443 WEWELKPNIFSWDKRMFELYEIPPHIKPN---WQVWYECVLPEDRQHAEKVIRDSLQSRS 499 + + + + +L WQ + E V ++ + + Sbjct: 233 YAVNHQWEVTYVNTEAEKLLHKKRLDIIGKNIWQEFSEMVHT----KFYHILHQVMSEQI 288 Query: 500 PFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERL-- 557 + E+ + A + L D+TE K + E + + + L Sbjct: 289 YQQFEYFFQPTG--KWFNIHAYPSSD------GLSIYFHDITEYKLVQEKMSLQNQYLSS 340 Query: 558 ----------HITLDSIGEAVVC-----IDMAMKITFM----NPV----------AEKMS 588 + LD + +A+V F+ NP ++M Sbjct: 341 LHETTLALMNRLNLDELLKAIVTRSAELSGTDHGFIFLIDNNNPSELVLRFGTGTYKQMV 400 Query: 589 GW---TQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVH 645 G E +G T + D S+ S I + L +S G + Sbjct: 401 GIRLKPGEGMVGTVWQTGEPLIVKDYSSWPGK--SSIFSHIKIHGGIALPLKSEGKINGI 458 Query: 646 YSITPL---STLDGSNIG------------------SVLVIQDVTESRKMLRQLSYSASH 684 I + L+ +N+ Q++ E +++ L Y A H Sbjct: 459 LGIIYIEKNQNLESNNLSLLTGFAQLASIALDNANLYQAAQQELAERKRIEEILRYLAYH 518 Query: 685 DALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELA 744 D+LT L NR F +L + L + + A++F+DLD FK VND+ GH GD LL+ +A Sbjct: 519 DSLTELPNRTLFNDRLSMALNQAHRNKNKLAVMFLDLDHFKKVNDTLGHDIGDQLLKGIA 578 Query: 745 SLMLSMLRSSDVLARLGGDEFGLLLPDCN-VESARFIATRIISAVNDYHFIWEGRVHRVG 803 +LR D +AR+GGDEF +LL + E+A +A +II + + +I + Sbjct: 579 QRFSKLLRKGDTIARIGGDEFTILLHNITRAENASIVADKIIDTLAN-PWIIGNHEFHIT 637 Query: 804 ASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQW 863 S GI L D+ A ++ AD A Y +K GR Y P A R + + Sbjct: 638 TSIGIALYPDDGTDAESLLKNADAAMYQAKEMGRNNYQFYTPTMNAQTLRRFELE-NNLR 696 Query: 864 RMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHAL 922 R + + ++ I + + + +L W + +I F + L + Sbjct: 697 RALDRKEFVIYYQP--QVEIHTGKIVGVEALIRWQHPQRGMISPAEFIPMAEETGLIIPI 754 Query: 923 DRRVFHEFFQQ--AAKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLI 980 + Q A + + +++ LS L + LE++ L P+ L L Sbjct: 755 GEWILRRACAQNKAWQDRGFSPMRVTVNLSARQFLQPHLPQYISNVLEDTGLGPQWLELE 814 Query: 981 IPAEAILDHA----ESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANV 1036 I + +++ +LR G + + G N LK D L +D ++ Sbjct: 815 ITESLAMKDVAFTEKTLIELRKMGITLAIDDFGTGYSSLNYLKRLPIDILKIDRSFIHDL 874 Query: 1037 QGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 D +I+ I L MK +A V + L DL+ G + P+ L Sbjct: 875 NTESDDVAIISAIITLGHNLKMKVVAEGVETKEQLMFLRQQQCDLMQGYLFTKPLPVREL 934 Score = 79.5 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 47/347 (13%), Positives = 122/347 (35%), Gaps = 49/347 (14%) Query: 414 INELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQ 473 I + + +Q + + + + + ++ + + P + Sbjct: 47 ITTEVSSLENLKQEEQGLKDYIDNLITLNAKLSTDGTVLLINETALRTFHMQPEEVVGKK 106 Query: 474 VW---YECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEV 530 +W + + + ++ + ++ + V +I N VLNK EV Sbjct: 107 LWDTPWWSYDADLHTQLKNAVKQAATGQTIYYETINHLVSGKKIYIYFTLNPVLNKNNEV 166 Query: 531 ERLLGINMDMTEVKQLNE----------------------------ALFQEKERLHITLD 562 L+ D+T+ K + + ++ ERL+ L+ Sbjct: 167 IYLVAEGRDITKRKMIEQDLISTNQELVAANEELISIEEELRISNKEIYLAHERLNNILE 226 Query: 563 SIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSAD 622 SI +A ++ ++T++N AEK+ + + +G + + + ++ Sbjct: 227 SITDAFYAVNHQWEVTYVNTEAEKLLHKKRLDIIGKNIWQEF--SEMVHTKFYHILHQVM 284 Query: 623 TSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYS- 681 + + + + +G +++H P S G + D+TE + + ++S Sbjct: 285 SEQIYQQFEYFFQ-PTGKWFNIH--AYPSSD------GLSIYFHDITEYKLVQEKMSLQN 335 Query: 682 ----ASHDALTHLANRASFEKQLRILLQT-VNSTHQRHALVFIDLDR 723 + H+ L NR + ++ L+ ++ + H +F+ +D Sbjct: 336 QYLSSLHETTLALMNRLNLDELLKAIVTRSAELSGTDHGFIFL-IDN 381 >UniRef50_A0KNI0 MorA n=2 Tax=Aeromonas RepID=A0KNI0_AERHH Length = 816 Score = 647 bits (1669), Expect = 0.0, Method: Composition-based stats. Identities = 177/807 (21%), Positives = 327/807 (40%), Gaps = 49/807 (6%) Query: 304 FRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT----------WP 353 + E + G+ + + N+ L G S+EE G +++ + Sbjct: 23 LQQLFELAPFGIGVFDRHFRCRSVNQTLADLNGLSREEHYGRYLREIVPTLAPVLEPLFQ 82 Query: 354 EDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIED 413 + ++ + +VE +SG + +R+ W + S + G P + + D Sbjct: 83 QIISSGVPRVELNLSGHTAAHQGRQRH--------WQAIY-SPMLDEQGVPDRILTIVRD 133 Query: 414 INELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIP-PHIKPNW 472 + E +R+ LA AG IG+WEW + + +D ++ L + Sbjct: 134 VTEQVEA-------QQRLQLAMSAGQIGVWEWHVTEDRLQFDGQVERLLGTTASQFQGGM 186 Query: 473 QVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIR-HIRALANRVLNKEGEVE 531 + + + P + + R ++ +P L D +R + A+ V + + Sbjct: 187 EQFIKRFDP----LSGEQFRAAVNGTAPIHLTLGYLGPDQLRGWVDIHADHVAATDHQGR 242 Query: 532 RLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWT 591 R+ G+ D T + L Q ++ ++ E ++ +D +I +NP M+ + Sbjct: 243 RITGVIHDATSRCNQEDKLRQ----ANVVFETAAEGIIIMDGQRQIISVNPAFSSMTQYE 298 Query: 592 QEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPL 651 + E +G ++H + + ++ A +++ + GG + ++ + Sbjct: 299 EAEIVGKSPEAIMHPRRHTD--IDYPWHTLLPGSHAWHGEMMCLRKDGGYFTSWQHVSAV 356 Query: 652 STLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTH 711 + V+ D++ RK QL++ A HD LT L NR +++L + L+T H Sbjct: 357 HDSRHNTTNYVIAFSDISAIRKAEAQLNHLAYHDPLTELGNRNLLQERLELELKTAQLNH 416 Query: 712 QRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD 771 Q+ AL+FIDLD FK +ND+ GH AGD LL+ LA + +LR +DV ARLGGDEF +L+P Sbjct: 417 QQLALLFIDLDGFKLINDTLGHRAGDELLKLLAERIRRVLRHNDVAARLGGDEFLVLIPF 476 Query: 772 CN-VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACY 830 + +A ++++ + + V AS GI L ++ ++S AD A Y Sbjct: 477 FERPQELERLAEQLLACLRE-PVELGHERVAVSASIGIALYPEHATSPDTLVSAADSAMY 535 Query: 831 ASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLW 890 +KN GR Y P ER +M ++ I+++QL +L + + R Sbjct: 536 EAKNRGRNGYLFYTPDMTEQTRERMSME-QGLFKAIEQHQLCVLYQPMT--ELASNRMSG 592 Query: 891 LISLKLWSCEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKG--ISISL 947 L +L W +I F + L + V QQ +A+ +S+ Sbjct: 593 LEALLRWQHPSEGMIGPTRFIPVAEECGLIEQIGEWVMRTACQQGQAWLAAGLAVPRLSI 652 Query: 948 PLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQ---KLRLAGCRIV 1004 +SV + SA V + L + PP L + + I +S+Q +L+ G +I Sbjct: 653 NVSVREMRSAGYVERVAAILAETGFPPEKLEIEVTESIIQRVDQSLQLFRRLKALGVQIA 712 Query: 1005 LSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGP 1064 + G + LK+ D + +D + + L I A LGM A Sbjct: 713 IDDFGTGFSSLSLLKSLPIDRIKIDRTFVQALPDDKHSRELCRTIINLADSLGMMVTAEG 772 Query: 1065 VVLPLVMDTLSGIGVDLIYGEVIADAQ 1091 + L + G + + Sbjct: 773 IETQAQRQFLQSLHCQEGQGYLFSHPL 799 Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 56/163 (34%), Gaps = 5/163 (3%) Query: 553 EKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNG 612 L + + D + +N ++G ++EE G L ++ Sbjct: 19 NMNELQQLFELAPFGIGVFDRHFRCRSVNQTLADLNGLSREEHYGRYLREIVPTLAPVLE 78 Query: 613 PLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESR 672 PL + I S+ R + G +P+ G + +++DVTE Sbjct: 79 PLFQQIISSGVPRVELNLSGHTAAHQGRQRHWQAIYSPMLDEQGVPDRILTIVRDVTEQV 138 Query: 673 KMLRQLSYSASHDALT-----HLANRASFEKQLRILLQTVNST 710 + ++L + S + +R F+ Q+ LL T S Sbjct: 139 EAQQRLQLAMSAGQIGVWEWHVTEDRLQFDGQVERLLGTTASQ 181 Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 44/327 (13%), Positives = 94/327 (28%), Gaps = 9/327 (2%) Query: 231 PRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAF 290 P + L L ++ S + + +L + W +L + + Sbjct: 71 PTLAPVLEPLFQQIISSGVPRVELNLSGHTAAHQGRQRHWQAIYSPMLDEQGVPDRILTI 130 Query: 291 RAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQL 350 + E++ + AM IG+ LQ + + + LG + + +G Q + Sbjct: 131 VRDVTEQVEAQQRLQLAMSAGQIGVWEWHVTEDRLQFDGQVERLLGTTASQFQGGMEQFI 190 Query: 351 TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQ 410 + L+ +Q ++G + Y + W + V TD Sbjct: 191 KRFDPLSG--EQFRAAVNG-TAPIHLTLGYLGPDQLRGWVDIHADHVAATDHQGRRITGV 247 Query: 411 IEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKP 470 I D E +Q + E GI + + I S + + + + Sbjct: 248 IHDATSRCNQEDKLRQA----NVVFETAAEGIIIMDGQRQIISVNPAFSSMTQY-EEAEI 302 Query: 471 NWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHI-RALANRVLNKEGE 529 + + P + L + E KDG + V + Sbjct: 303 VGKSPEAIMHPRRHTDIDYPWHTLLPGSHAWHGEMMCLRKDGGYFTSWQHVSAVHDSRHN 362 Query: 530 VERLLGINMDMTEVKQLNEALFQEKER 556 + D++ +++ L Sbjct: 363 TTNYVIAFSDISAIRKAEAQLNHLAYH 389 >UniRef50_A6WKV6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Shewanella RepID=A6WKV6_SHEB8 Length = 921 Score = 646 bits (1668), Expect = 0.0, Method: Composition-based stats. Identities = 137/721 (19%), Positives = 268/721 (37%), Gaps = 36/721 (4%) Query: 394 VSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFS 453 L+ + L I E + ++ IW + Sbjct: 214 AKLISDSIQRQLGEILSQHSAAEALSRGAPTCVDTVDLQTFIDSFEEHIWMKNVAGIYTL 273 Query: 454 WDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITV---- 509 ++ + + +E+P D + I + +E + + Sbjct: 274 CNRSVEKAWEMPRSEIVGKS---------DVELFGAEIANIFLEGDRLAIESGMPIIVAE 324 Query: 510 ------KDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDS 563 + L LN +GE ++G+ ++++ K++ E L + Sbjct: 325 CLDGNEAKNHLWLETLKLPTLNPQGEFVGVIGMTRNISKHKEVEEQLT----LATNVFKN 380 Query: 564 IGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADT 623 E VV D IT +N +++G+ +EE LG + + + +++A Sbjct: 381 SVEGVVVTDRHGNITDVNGAFFEITGYVREELLGQNPRIF--SSGRHDKAFFDKLWNALL 438 Query: 624 SRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSAS 683 + ++ ++G + + +I+ + G V V D++ ++ QL++ A Sbjct: 439 ANGKWNGEIWNRRKNGTIFPQNITISTIYDEVGDVRYFVAVFADISAQKENEAQLTHLAY 498 Query: 684 HDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLREL 743 D LTHL NR F QL+ ++ + + A V ID+D FK +NDS GH+ GD +L EL Sbjct: 499 FDPLTHLPNRMKFMMQLKQEVRQAKRLNLQLATVMIDVDLFKHINDSFGHSIGDEMLVEL 558 Query: 744 ASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIA-TRIISAVNDYHFIWEGRVHRV 802 A + S + DVL+R+GGDEF L+ + +A ++ + G R+ Sbjct: 559 AKRLRSQVGDQDVLSRIGGDEFVALISGIDNNEDATVAINQLRQVFEQPFIVSTGDHLRL 618 Query: 803 GASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQ 862 AS G++L ++ A ++ AD A Y +KN GR Y E + Sbjct: 619 TASMGVSLYPNDGTDADTLLRNADAAMYRAKNDGRNNYAFYTESLTQQSFEHLKLQ-SAL 677 Query: 863 WRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWS-CEGEIIDEQTFRRSFSDPALSHA 921 + I++N L ++ + + + +L W + +I F L H Sbjct: 678 YGAIEQNALYLMYQPKLD--LVSRKTVGFEALLRWHDPQLGLISPAVFIPVAEKIGLIHE 735 Query: 922 LDRRVFHEFFQQAAKAVASKGI--SISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHL 979 + V +Q + + I++ ++ L ++ V+D+ L + LP + L L Sbjct: 736 IGLWVLETACRQGMRWLREGKHFGRIAVNVAGQQLQRSSFVDDVKRVLAETGLPAKHLEL 795 Query: 980 IIPAEAILDHAE----SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCAN 1035 + ++ + + +++L G + + G N LK L +D + Sbjct: 796 EVTESVMMQNPDLAIRDLKRLGDLGIELSVDDFGTGYSSLNYLKKLPIHKLKIDQSFVRD 855 Query: 1036 VQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDL 1095 + + + + + L + IA V D L D G + + Q + Sbjct: 856 IPFDTNNTAIAKAVIALGHALKLDIIAEGVETKEQADFLQQNQCDQAQGYLFSRPQLPED 915 Query: 1096 L 1096 L Sbjct: 916 L 916 Score = 83.8 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 60/165 (36%), Gaps = 5/165 (3%) Query: 274 LLILLPANIMTMVMYAFR--AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKAL 331 L L P V+ R ++ K + E T N + S G+ + G N A Sbjct: 342 LPTLNPQGEFVGVIGMTRNISKHKEVEEQLTLATNVFKNSVEGVVVTDRHGNITDVNGAF 401 Query: 332 CQFLGYSQEELRGLTFQQLTWPE-DLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWA 390 + GY +EEL G + + D + L++ ++ E +NG + Sbjct: 402 FEITGYVREELLGQNPRIFSSGRHDKAFFDKLWNALLAN--GKWNGEIWNRRKNGTIFPQ 459 Query: 391 LLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLAN 435 + +S + G YF+A DI+ K E L L + Sbjct: 460 NITISTIYDEVGDVRYFVAVFADISAQKENEAQLTHLAYFDPLTH 504 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 35/252 (13%), Positives = 86/252 (34%), Gaps = 10/252 (3%) Query: 304 FRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQV 363 + ++ + + G + N+++ + + E+ G + +L E N L+ Sbjct: 251 LQTFIDSFEEHIWMKNVAGIYTLCNRSVEKAWEMPRSEIVGKSDVELFGAEIANIFLEGD 310 Query: 364 EKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQV 423 I + E N + +W + G + I +I++ K E+ Sbjct: 311 RLAIESGMPIIVAECLDGNEAKNHLWLETLKLPTLNPQGEFVGVIGMTRNISKHKEVEEQ 370 Query: 424 NQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI--PPHIKPNWQVWYECVLP 481 T + G+ + NI + FE+ + N +++ Sbjct: 371 LTLA----TNVFKNSVEGVVVTDRHGNITDVNGAFFEITGYVREELLGQNPRIFSSGRH- 425 Query: 482 EDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA-NRVLNKEGEVERLLGINMDM 540 D+ +K+ L + + E K+G + + + + ++ G+V + + D+ Sbjct: 426 -DKAFFDKLWNALLANGK-WNGEIWNRRKNGTIFPQNITISTIYDEVGDVRYFVAVFADI 483 Query: 541 TEVKQLNEALFQ 552 + K+ L Sbjct: 484 SAQKENEAQLTH 495 >UniRef50_Q1N3N5 Sensory box protein n=1 Tax=Bermanella marisrubri RepID=Q1N3N5_9GAMM Length = 764 Score = 646 bits (1668), Expect = 0.0, Method: Composition-based stats. Identities = 177/765 (23%), Positives = 317/765 (41%), Gaps = 35/765 (4%) Query: 306 NAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGL-TFQQLTWPED------LNK 358 + ME S A+ G + N A GY+ +E+R + T+ + +P++ L Sbjct: 10 DLMEQSPQPCAVRGEGDDIVYINPAFTLVFGYTLDEVRNINTWYRCAYPDESYRRSVLQD 69 Query: 359 DLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELK 418 QQ+ +L + +E +NG+ L + DG + D+ + Sbjct: 70 WEQQLRQLEQTNSHPVHLEVTIQCKNGEKKRVELY--PFKLNDGQHCQYGINFIDVTRAR 127 Query: 419 RTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPH-IKPNWQVWYE 477 + E ++ ER LA ++ G IW+W++K F + + E ++ N +Y Sbjct: 128 KAEDAVKKSEERHRLAMKSSGTRIWDWDVKQQKFYFSPDLVEELGYDGQRLEYNVDDFYN 187 Query: 478 CVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRA-LANRVLNKEGEVERLLGI 536 V P+D + EK IR + +P+ L +R+ KDG + + + N++ V+R +G Sbjct: 188 IVHPDDLKAIEKAIRQHFKYNTPYHLNYRLRHKDGHYFLYENIGQAIRNQDNLVQRFIGS 247 Query: 537 NMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEAL 596 + +++ K LNE + + D+ GE ++ D I +N +SG+ Q E + Sbjct: 248 SKNLSTQKALNEQA----QFGRLVFDNSGEGILIADAHRVIKAVNSAYCYISGYEQHEVI 303 Query: 597 GVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDG 656 G+ +L D +I+ + + + G + + I + Sbjct: 304 GLESDFLLKENPLDEKQ--RDIFKSIQRNGYWRGETWYKHKEGHAIAIEMMINTQKNSNN 361 Query: 657 SNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHAL 716 +++ D+T+ ++ + A +D LT L NR SF + + L+Q AL Sbjct: 362 EIENYIVLFSDITDKKQTQELIWQQAHYDNLTQLLNRHSFTQYTQNLIQKA----LPFAL 417 Query: 717 VFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVE 775 +FIDLD FK VND+ GH GDALL E A + +R SD++AR GGDEF +LL NV Sbjct: 418 LFIDLDNFKQVNDTQGHNVGDALLIEAAKRIKQCVRESDIVARFGGDEFTVLLLGIKNVL 477 Query: 776 SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNG 835 S + I + I +++ F + V AS GI ++ ++ AD A Y +K+ Sbjct: 478 STKRICSDITKRLSE-PFTLDKEKAYVSASIGIAQFPWDSDNLEDLYKYADQAMYEAKHL 536 Query: 836 GRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLK 895 GR R + + + SER +SLD + + ++ N+ + + + + +L Sbjct: 537 GRNRFSFFTHELQQKASERQRISLDLR-QALERNEFQVYYQPIVDLK--SHQVHKAEALI 593 Query: 896 LWSCEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS--KGISISLPLSVA 952 W II F + L + +F + Q + IS+ S Sbjct: 594 RWHHPRDGIISPADFIPIAEESGLIIEIGNWIFKQAAMQTKLWRKTLYPDFQISINKSPV 653 Query: 953 GL--SSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRLAGCRIVLS 1006 + + + L+ LP + + I +LD E + +G ++ L Sbjct: 654 QFYGNQEDIHQSWSQFLQIINLPGDGISVEITEGLLLDSIPIVKEKLSDFSQSGIQVSLD 713 Query: 1007 QVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQG 1051 G + LK DY+ +D N+ + D +L I Sbjct: 714 DFGTGYSALSYLKKFNIDYIKIDMSFVRNIVNDKYDLILCETIIA 758 Score = 92.2 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 50/274 (18%), Positives = 99/274 (36%), Gaps = 11/274 (4%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGL- 345 + R + +SE R AM+ S + + Q + L + LGY + L Sbjct: 123 VTRARKAEDAVKKSEERHRLAMKSSGTRIWDWDVKQQKFYFSPDLVEELGYDGQRLEYNV 182 Query: 346 -TFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTP 404 F + P+DL + + + Y + R +++G +R+ D Sbjct: 183 DDFYNIVHPDDLKAIEKAIRQHFKYNTP-YHLNYRLRHKDGHYFLYENIGQAIRNQDNLV 241 Query: 405 LYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI 464 FI ++ T++ + + L + G GI + I + + + Sbjct: 242 QRFIG----SSKNLSTQKALNEQAQFGRLVFDNSGEGILIADAHRVIKAVNSAYCYISGY 297 Query: 465 PPHIKPNWQVWYECVLPE-DRQHAEKVIRDSLQSRSPFKLEFRITVKDGI-RHIRALANR 522 H + + +L E ++ I S+Q ++ E K+G I + N Sbjct: 298 EQHEVIGLES--DFLLKENPLDEKQRDIFKSIQRNGYWRGETWYKHKEGHAIAIEMMINT 355 Query: 523 VLNKEGEVERLLGINMDMTEVKQLNEALFQEKER 556 N E+E + + D+T+ KQ E ++Q+ Sbjct: 356 QKNSNNEIENYIVLFSDITDKKQTQELIWQQAHY 389 Score = 69.5 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 56/142 (39%), Gaps = 1/142 (0%) Query: 294 RKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWP 353 +K ++E R + S G+ + N A C GY Q E+ GL L Sbjct: 254 QKALNEQAQFGRLVFDNSGEGILIADAHRVIKAVNSAYCYISGYEQHEVIGLESDFLLKE 313 Query: 354 EDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIED 413 L++ + + K I + E Y ++ G + + ++ ++++ +I D Sbjct: 314 NPLDEKQRDIFKSIQ-RNGYWRGETWYKHKEGHAIAIEMMINTQKNSNNEIENYIVLFSD 372 Query: 414 INELKRTEQVNQQLMERITLAN 435 I + K+T+++ Q L Sbjct: 373 ITDKKQTQELIWQQAHYDNLTQ 394 Score = 55.7 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 44/129 (34%), Gaps = 12/129 (9%) Query: 556 RLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLM 615 + ++ + I ++NP + G+T +E + T + D Sbjct: 7 WQYDLMEQSPQPCAVRGEGDDIVYINPAFTLVFGYTLDEV--RNINTWYRCAYPDESYRR 64 Query: 616 -------ENIYSADTSRSA-IEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQD 667 + + + + S + +V + C++G V P DG + + D Sbjct: 65 SVLQDWEQQLRQLEQTNSHPVHLEVTIQCKNGEKKRVELY--PFKLNDGQHCQYGINFID 122 Query: 668 VTESRKMLR 676 VT +RK Sbjct: 123 VTRARKAED 131 >UniRef50_Q1GXN7 Diguanylate cyclase/phosphodiesterase n=3 Tax=Proteobacteria RepID=Q1GXN7_METFK Length = 951 Score = 646 bits (1668), Expect = 0.0, Method: Composition-based stats. Identities = 166/814 (20%), Positives = 306/814 (37%), Gaps = 30/814 (3%) Query: 295 KHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQ----- 349 + E E +R + S + + + + G E G + Sbjct: 134 DKLQEQELQYRQLVMNSPDIFIRYDQDCRRIFLSDGYEAVFGVPAAEALGRKPTEVWGRP 193 Query: 350 LTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIA 409 + PED L++V + SGE +E + V L R+ G + Sbjct: 194 MMRPEDFEARLREVMR--SGEEQEIELEWV---GDEHYVCQSLHAVPERNVKGEIKGVLT 248 Query: 410 QIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIK 469 DI+ ++R E+ ++ + E +W +L + + + E + + Sbjct: 249 ITRDISHIRRVERELRKRERYQSALIENFPFVVWLKDLNSKLLAANSAYAEFAGVASKDE 308 Query: 470 PNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGE 529 + ++ +D + + + LQS P ++T ++G + + +G+ Sbjct: 309 LEGKTDFDLFPLQDARTHVEGDKRVLQSGQPSHSVLQVTKRNGEKAWIEAYKSPMVVDGK 368 Query: 530 VERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSG 589 V +G D+T++KQ E L Q + L +D+ + ++ D+ + ++N K G Sbjct: 369 VMGTVGFFRDITDIKQNEEKLIQRERELQSLIDNTPDTIIRYDLNARRLYVNTPKLKRIG 428 Query: 590 WTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCR--SGGSYDVHYS 647 +G G + SA + LH + +G ++ +H Sbjct: 429 IESGRLIGTTPSEY----PGGEAYMKYEEKIRGVINSATPDFLELHGKADNGNTWFIHVR 484 Query: 648 ITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTV 707 I P G IG + V +D+TE + ++ Y A +DALT L NR F ++ +L Sbjct: 485 IVPEFGEQGQVIGVLAVERDITELMEYRERIHYLAYYDALTGLPNRTLFADRVNQVLADA 544 Query: 708 NSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGL 767 + QR L+ +DLDRFK VND+ GH AGD LL +A + + +RS D +ARL GDEF + Sbjct: 545 SWHEQRFGLMMLDLDRFKEVNDTLGHQAGDDLLVAVAQRLNASVRSYDTIARLSGDEFAI 604 Query: 768 LLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQAD 826 LLP+ N + IA +I + F+ + + S GI + D+ A + AD Sbjct: 605 LLPELRNPDDLATIARKINDEIAK-PFLIHDKELFISTSIGIAIYPDDGDDRATLFKSAD 663 Query: 827 IACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEA 886 +A Y +KN GR Y + + SE M + +K + + + Sbjct: 664 VAMYHAKNYGRNNYQFYSRELGSKASE-YIMLGASIRQALKNAEFELFYQPQVD--LMSG 720 Query: 887 RNLWLISLKLWS-CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQA----AKAVASK 941 + +L W + ++ F + + L + V E Sbjct: 721 EIVGAEALLRWRNPQLGVVMPDRFIKVAEESGLIVEIGEWVLREACSAVVCLNRYRPDDH 780 Query: 942 GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLR 997 +S+++ LS L+ + + L + P L L I +L+ ++ ++ + Sbjct: 781 PLSMAVNLSSRQFLYNDLLASVKDILAETGCKPEWLKLEITESLLLEDSQEIISTLSTFK 840 Query: 998 LAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLG 1057 G I + + L + +D ++ LIT I A L Sbjct: 841 EMGITISIDDFCTGYSAMSYLGQFPISQVKIDRSFVRDIAAKQDKLELITAIIRIAHALR 900 Query: 1058 MKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQ 1091 ++ +A V + L G + G Sbjct: 901 LELVAEGVESKQQANLLKIQGCTIAQGYFFGKPM 934 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 57/378 (15%), Positives = 134/378 (35%), Gaps = 21/378 (5%) Query: 315 MALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPED---LNKDLQQVEKLISGEI 371 + + + + N A C+ LGYS++ L ++ + D D +++++ Sbjct: 31 VLVCDADARICLANLAACEVLGYSEKLLLQMSATDIITHLDSVGWKNDWRRLQQ-----Q 85 Query: 372 NTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERI 431 + E N+ GD V + + D Y + D+ Q+ + Sbjct: 86 HVMVQETSLRNQAGDTVPVEIQSNYFVDADQA--YCVLLGRDLTARFDMLDKLQEQELQY 143 Query: 432 TLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPN---WQVWYE-CVLPEDRQHA 487 ++ ++ +P +VW + PED Sbjct: 144 RQLVMNSPDIFIRYDQDCRRIFLSDGYEAVFGVPAAEALGRKPTEVWGRPMMRPED---F 200 Query: 488 EKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLN 547 E +R+ ++S ++E + A N +GE++ +L I D++ ++++ Sbjct: 201 EARLREVMRSGEEQEIELEWVGDEHYVCQSLHAVPERNVKGEIKGVLTITRDISHIRRVE 260 Query: 548 EALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGW-TQEEALGVPLLTVLHI 606 L + + +++ V D+ K+ N + +G +++E G + + Sbjct: 261 RELRKRERYQSALIENFPFVVWLKDLNSKLLAANSAYAEFAGVASKDELEGKTDFDLFPL 320 Query: 607 TFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQ 666 D +E S + + R+G + +P+ +DG +G+V + Sbjct: 321 --QDARTHVEGDKRVLQSGQPSHSVLQVTKRNGEKAWIEAYKSPM-VVDGKVMGTVGFFR 377 Query: 667 DVTESRKMLRQLSYSASH 684 D+T+ ++ +L Sbjct: 378 DITDIKQNEEKLIQRERE 395 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 22/149 (14%), Positives = 50/149 (33%), Gaps = 3/149 (2%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTN-KALCQFLGYSQEELRGL 345 + + + + + E ++ ++ + + + L N L + G L G Sbjct: 379 ITDIKQNEEKLIQRERELQSLIDNTPDTIIRYDLNARRLYVNTPKLKRI-GIESGRLIGT 437 Query: 346 TFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPL 405 T + E K +++ +I+ + +E NG+ + + + G + Sbjct: 438 TPSEYPGGEAYMKYEEKIRGVINSATPDF-LELHGKADNGNTWFIHVRIVPEFGEQGQVI 496 Query: 406 YFIAQIEDINELKRTEQVNQQLMERITLA 434 +A DI EL + L L Sbjct: 497 GVLAVERDITELMEYRERIHYLAYYDALT 525 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 52/131 (39%), Gaps = 10/131 (7%) Query: 555 ERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPL 614 + L ++ I E V+ D +I N A ++ G++++ L + ++ + Sbjct: 18 DMLSFAINRIREIVLVCDADARICLANLAACEVLGYSEKLLLQMSATDII---THLDSVG 74 Query: 615 MENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTES--- 671 +N + + + Q+ L ++G + V D + VL+ +D+T Sbjct: 75 WKNDWRRLQQQHVMVQETSLRNQAGDTVPVEIQSNYFVDADQA--YCVLLGRDLTARFDM 132 Query: 672 --RKMLRQLSY 680 + ++L Y Sbjct: 133 LDKLQEQELQY 143 >UniRef50_Q2SF23 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF23_HAHCH Length = 637 Score = 646 bits (1667), Expect = 0.0, Method: Composition-based stats. Identities = 132/571 (23%), Positives = 250/571 (43%), Gaps = 13/571 (2%) Query: 534 LGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQE 593 + +N + + + ++L + + G +++ D +I F+N ++G+ QE Sbjct: 59 IRLNRQLAAKVKALHERDFKLKKLSSAVTNSGCSIIITDRLGRIEFVNNKFVNVTGYGQE 118 Query: 594 EALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLST 653 EA G L +L+ D E I+ +D E +V+ R G + +++ + Sbjct: 119 EARGR-FLDILNPKDMDAEKPQEQIWESDILYDGWEGEVLSRRRDGYDFWWAVTVSTVCD 177 Query: 654 LDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQR 713 D + V+ DV+E ++ R++ A +D+LT LANR F +L ++ + ++ Sbjct: 178 SDNTVTNYVISGVDVSELKEANRKMQQMALYDSLTGLANRRLFVDRLEQAVKAASRDRKQ 237 Query: 714 HALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC- 772 AL+F+DLD+FK +ND+ GH AGD+LL+ +A + + +R+ D +ARLGGDEF +LL D Sbjct: 238 IALLFLDLDQFKRINDTLGHDAGDSLLQTVAQRLKNCVRAKDTVARLGGDEFTVLLTDIV 297 Query: 773 NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYAS 832 + S +AT+I+ A+ + + V S G+TL + A +M AD+A Y + Sbjct: 298 DTFSVTPVATQILKALKE-PIKLKKHEVIVSTSIGVTLAPTDGANADVLMKNADLALYRA 356 Query: 833 KNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLI 892 K GR R Y + A ++ M + + ++ + + + + + + Sbjct: 357 KEHGRDRYHFYTEELNAHALKQLLMEQELR-HALQFEEFTLGFQP--QVNLTTGKIVSVE 413 Query: 893 SLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAA--KAVASKGISISLPL 949 +L W ++ +F + L + + R V Q + + I I++ L Sbjct: 414 ALIRWHHPSKGLVMPDSFISVAEETGLINPIGRWVLKNACMQMKMLQDLTGSAIKIAVNL 473 Query: 950 SVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESV----QKLRLAGCRIVL 1005 S L + E L + L P L L + ++ ++V ++LR G + + Sbjct: 474 SARQFDDPKLEQSIEEALNETGLEPEWLELEVTESMLMGDIQAVTNKLKRLRQTGVSLAI 533 Query: 1006 SQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPV 1065 G + LK + L +D E ++ + D + + I A +L +K +A V Sbjct: 534 DDFGSGYSSLSYLKKLPVNALKVDREFVRDIPEDSNDMEITSAIIAVAHKLQLKVVAEGV 593 Query: 1066 VLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 + L D G + + L Sbjct: 594 ETAEQKEYLLANQCDFAQGYFFSKPLSFEDL 624 Score = 76.5 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 80/218 (36%), Gaps = 7/218 (3%) Query: 232 RMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFR 291 + I L + V+ + A ++ + I + Sbjct: 7 FWDVLPISLLMLGSVATIHLASLYYFEGESLSWPILTTLSIAVIFAFLSLIQIRLNRQLA 66 Query: 292 AERKHISESETHFR---NAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQ 348 A+ K + E + + +A+ S + + G+ N GY QEE RG F Sbjct: 67 AKVKALHERDFKLKKLSSAVTNSGCSIIITDRLGRIEFVNNKFVNVTGYGQEEARGR-FL 125 Query: 349 QLTWPEDLNKDLQQVEKLISGEI--NTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 + P+D++ + Q E++ +I + + E R+G W + VS V +D T Sbjct: 126 DILNPKDMDAEKPQ-EQIWESDILYDGWEGEVLSRRRDGYDFWWAVTVSTVCDSDNTVTN 184 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWE 444 ++ D++ELK + QQ+ +L A + Sbjct: 185 YVISGVDVSELKEANRKMQQMALYDSLTGLANRRLFVD 222 >UniRef50_C6CDP3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dickeya dadantii Ech703 RepID=C6CDP3_DICDC Length = 685 Score = 646 bits (1666), Expect = 0.0, Method: Composition-based stats. Identities = 145/663 (21%), Positives = 259/663 (39%), Gaps = 23/663 (3%) Query: 439 GIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSR 498 +GI + N + + +Y + + + PE + + + L Sbjct: 20 PVGIAVIDYSGNYLTVNPAYCNIYGYTQQEMLH-RSFTMVFPPEAQGSVLERHQRFLDEG 78 Query: 499 SPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLH 558 E+ +T +DG + + G L +D++E K+ +E ++ Sbjct: 79 GKLGGEWTVTRRDGTLLTVWSESVPFAQAGHKADRLVYVLDISERKKTHEQ----QQIAA 134 Query: 559 ITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENI 618 D+ EA+ D I +NP +++G+ ++ G + + Sbjct: 135 AVYDASHEAIFVTDADNNIISVNPAFSRLTGYHFDDVNGKNPRMFK--SSRHPPSFYAEM 192 Query: 619 YSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQL 678 + A + +V ++G Y ++T + G I V + D+T +K + Sbjct: 193 WHALHEKGLWIGEVWDRHKNGHDYLKELTVTVIRDAAGHIINHVGMFSDITLRKKQEELI 252 Query: 679 SYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDA 738 A++DA+T L NR F+ +L Q T AL+ IDLD FKAVNDS GH AGD Sbjct: 253 WRQANYDAITDLPNRHLFQSKLEQAAQHARRTGNLMALMLIDLDHFKAVNDSMGHRAGDM 312 Query: 739 LLRELASLMLSMLRSSDV-LARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWE 796 LL ++ ++ ++ +D +ARLGGDEF +++ D +A ++ ++ + F + Sbjct: 313 LLTRVSQRLIDSVQHADTIIARLGGDEFAVIISDLFQPHDCDALAKALLENLS-HPFNID 371 Query: 797 GRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAA 856 G V AS GI ++ + AD A YA+KN GR + Y P A R Sbjct: 372 GENMFVSASIGIACFPTDSDNLEALFKNADQAMYAAKNAGRNGFSYYSPALHDAARTRLR 431 Query: 857 MSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCE-GEIIDEQTFRRSFSD 915 M+ D + + I+E Q + + + + +L W ++ F + Sbjct: 432 MTNDLR-KAIREEQFEVYYQPIVA--LDTGHITKAEALVRWHHPTHGLVSPAEFIPLAEE 488 Query: 916 PALSHALDRRVFHEFFQQAAKAVA--SKGISISLPLSVAGLSSATLVN-DLLEQLENSPL 972 + L V + Q A+ +++ LS L S + D L +L+ L Sbjct: 489 TGIIIPLGNWVARQAIAQLARWRQFCDPRFQMTINLSPIQLRSQDFADMDWLRELDRHGL 548 Query: 973 PPRLLHLIIPAEAILDHAESVQK----LRLAGCRIVLSQVGRDLQIFNSLKANMADYLLL 1028 + + I +L+ V + R AG +I + G L+ DYL + Sbjct: 549 SGDAIAIEITEGLLLNAEPRVNRNLHMFRDAGIQIAIDDFGTGYSSLAYLRRFNIDYLKI 608 Query: 1029 DGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIA 1088 D ++ + + L I A LG++ +A V L IG D G + + Sbjct: 609 DRSFIEDM--DGVGHELCVAIVAMAHSLGLQVVAEGVETLQQSAMLKRIGCDYAQGFLFS 666 Query: 1089 DAQ 1091 Q Sbjct: 667 RPQ 669 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 105/261 (40%), Gaps = 12/261 (4%) Query: 299 ESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNK 358 S++ F+ ++ +G+A++ G +L N A C GY+Q+E+ +F + PE Sbjct: 7 RSDSLFQAILDRCPVGIAVIDYSGNYLTVNPAYCNIYGYTQQEMLHRSFTMVFPPEAQGS 66 Query: 359 DLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELK 418 L++ ++ + E E R+G ++ + S+ G + + DI+E K Sbjct: 67 VLERHQRFLD-EGGKLGGEWTVTRRDGTLLTV-WSESVPFAQAGHKADRLVYVLDISERK 124 Query: 419 RTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFEL--YEIPPHIKPNWQVWY 476 +T + + +A I+ + NI S + L Y N +++ Sbjct: 125 KTH----EQQQIAAAVYDASHEAIFVTDADNNIISVNPAFSRLTGYHFDDVNGKNPRMFK 180 Query: 477 ECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRAL-ANRVLNKEGEVERLLG 535 P + +L + + E K+G +++ L + + G + +G Sbjct: 181 SSRHP---PSFYAEMWHALHEKGLWIGEVWDRHKNGHDYLKELTVTVIRDAAGHIINHVG 237 Query: 536 INMDMTEVKQLNEALFQEKER 556 + D+T K+ E ++++ Sbjct: 238 MFSDITLRKKQEELIWRQANY 258 Score = 73.0 bits (178), Expect = 7e-11, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 49/139 (35%), Gaps = 1/139 (0%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 +ERK E + + S + + + + N A + GY +++ G + Sbjct: 121 SERKKTHEQQQIAAAVYDASHEAIFVTDADNNIISVNPAFSRLTGYHFDDVNGKNPRMFK 180 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 ++ + E + E ++NG L V+++R G + + Sbjct: 181 SSRHPPSFYAEMWHALH-EKGLWIGEVWDRHKNGHDYLKELTVTVIRDAAGHIINHVGMF 239 Query: 412 EDINELKRTEQVNQQLMER 430 DI K+ E++ + Sbjct: 240 SDITLRKKQEELIWRQANY 258 Score = 68.4 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 44/133 (33%), Gaps = 3/133 (2%) Query: 550 LFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFG 609 ++ LD + ID + +NP + G+TQ+E L V Sbjct: 5 EWRSDSLFQAILDRCPVGIAVIDYSGNYLTVNPAYCNIYGYTQQEMLHRSFTMVFPPEA- 63 Query: 610 DNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVT 669 G ++E + + + R G V P + V V+ D++ Sbjct: 64 -QGSVLERHQRFLDEGGKLGGEWTVTRRDGTLLTVWSESVPFAQAGHKADRLVYVL-DIS 121 Query: 670 ESRKMLRQLSYSA 682 E +K Q +A Sbjct: 122 ERKKTHEQQQIAA 134 >UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W545_9CYAN Length = 709 Score = 645 bits (1665), Expect = 0.0, Method: Composition-based stats. Identities = 154/698 (22%), Positives = 276/698 (39%), Gaps = 24/698 (3%) Query: 413 DINELKRTEQVNQQLMERITLANEAGGIGIWEWELKP-NIFSWDKRMFELYEIPP-HIKP 470 +I + E +Q+ + I + +W + + ++ + + Sbjct: 2 NITQDNGIEPKSQKRHQLIPAILNSLDEVVWSASAQTYKLLYINQAAETILGRTLCELYD 61 Query: 471 NWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD-GIRHIRALANRVLNKEGE 529 +W + P+DRQ ++ + +S + +E+RI D +R I + ++ G Sbjct: 62 QPTLWELMIHPDDRQRVQQQFQSLGESGNQ-AVEYRIVRPDGEVRWIHNRVCAIADETGT 120 Query: 530 VERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSG 589 V R+ GI D+T+ KQ L E + L + + A+ +D I F N ++++ G Sbjct: 121 VIRIDGIARDITQRKQAEVQLCPENDLLQGIMQTSIAAITVVDTQGNIIFANARSQQVLG 180 Query: 590 WTQEEALGVPLLTV-LHITFGDNGPLMENIYSAD----TSRSAIEQDVVLHCRSGGSYDV 644 TQ E + IT GP E T + + + G + Sbjct: 181 LTQSELVERRYNCPTWQITDFQGGPFPEEQLPFQQVMVTGQPVFDVQHAIEWADGTRKYL 240 Query: 645 HYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILL 704 + PL DG V + D++ + + QL + A HD LT L NR F +++ + Sbjct: 241 SVNGAPLKDADGVITHIVFSVTDISHHKHVEEQLCHDALHDNLTRLPNRTLFMERVNHAI 300 Query: 705 QTVNSTHQ-RHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGD 763 + A++F+DLDRFK VNDS GH GD LL A + +R++D +A L GD Sbjct: 301 KLAKRNQDYLFAVLFLDLDRFKVVNDSLGHDVGDQLLTATARQLEKCVRTTDTVAHLSGD 360 Query: 764 EFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVM 822 EF +LL D +++ A +A RI + + F AS GI L ++ +++ Sbjct: 361 EFTILLEDIKDIKDATRVAERIQATLKA-PFNLNNHEVFTSASIGIALSSTGYERSEDIL 419 Query: 823 SQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPR 882 ADIA Y +K G+ R +++ A E + D + R ++ + + + S Sbjct: 420 RDADIAMYRAKELGKARHEIFDKIMHARALELLRLENDLR-RALERQEFEVYYQPITS-- 476 Query: 883 IPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA---- 937 + +L W E ++ F D L L V HE +Q Sbjct: 477 LVTGMLTGFEALVRWRHPELGLVSPAEFIPVAEDTGLIIPLGEWVLHEACRQLRMWHTQF 536 Query: 938 VASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQ--- 994 + + +S+ LS + L+ + L + L L L I ++++AE+V Sbjct: 537 PTPEPLKMSVNLSGKQIKEPDLIEQIDHILAETGLDGSFLKLEITESILMENAETVTKML 596 Query: 995 -KLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHA 1053 +LR ++ + G + L + L +D + + + +I I A Sbjct: 597 LQLRARNIQLSVDDFGTGYSSLSYLHRFPVNTLKIDRSFVSKMNPKNRNTEIIRTIITLA 656 Query: 1054 QRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQ 1091 L M IA V + L + + G + + Sbjct: 657 HSLRMDVIAEGVETLEQLTELKLLNCEQGQGYLFSKPL 694 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 46/243 (18%), Positives = 95/243 (39%), Gaps = 17/243 (6%) Query: 323 QWLQTNKALCQFLGYSQEELRGLT--FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRY 380 + L N+A LG + EL ++ + P+D + QQ + L GE ++E R Sbjct: 40 KLLYINQAAETILGRTLCELYDQPTLWELMIHPDDRQRVQQQFQSL--GESGNQAVEYRI 97 Query: 381 YNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGI 440 +G+V W V + GT + DI + K+ E + + + Sbjct: 98 VRPDGEVRWIHNRVCAIADETGTVIRIDGIARDITQRKQAEVQLCPENDLLQGIMQTSIA 157 Query: 441 GIWEWELKPNIFSWDKRMFELYEIPPHIK-------PNWQV--WYECVLPEDRQHAEKVI 491 I + + NI + R ++ + P WQ+ + PE++ ++V+ Sbjct: 158 AITVVDTQGNIIFANARSQQVLGLTQSELVERRYNCPTWQITDFQGGPFPEEQLPFQQVM 217 Query: 492 RDSLQSRSPFKLEFRITVKDGIR-HIRALANRVLNKEGEVERLLGINMDMTEVKQLNEAL 550 + + F ++ I DG R ++ + + +G + ++ D++ K + E L Sbjct: 218 ---VTGQPVFDVQHAIEWADGTRKYLSVNGAPLKDADGVITHIVFSVTDISHHKHVEEQL 274 Query: 551 FQE 553 + Sbjct: 275 CHD 277 Score = 55.7 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 26/170 (15%), Positives = 63/170 (37%), Gaps = 14/170 (8%) Query: 276 ILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFL 335 ++ + + + + + + M+ S + +V T+G + N Q L Sbjct: 120 TVIRIDGIARDITQRKQAEVQLCPENDLLQGIMQTSIAAITVVDTQGNIIFANARSQQVL 179 Query: 336 GYSQEELRGLTF----QQLT------WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNG 385 G +Q EL + Q+T +PE+ L + +++G+ + ++ +G Sbjct: 180 GLTQSELVERRYNCPTWQITDFQGGPFPEE---QLPFQQVMVTGQ-PVFDVQHAIEWADG 235 Query: 386 DVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLAN 435 + + + ++ DG + + + DI+ K E+ L Sbjct: 236 TRKYLSVNGAPLKDADGVITHIVFSVTDISHHKHVEEQLCHDALHDNLTR 285 >UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B7KEN2_CYAP7 Length = 1471 Score = 645 bits (1665), Expect = 0.0, Method: Composition-based stats. Identities = 169/822 (20%), Positives = 326/822 (39%), Gaps = 37/822 (4%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + + + + + + ++Y + +A + +L N+ + LG+S EE++ L Sbjct: 658 ITESKEIEEELKQQGELLQTIVDYIPVMLAYIDPNYNFLWVNEEFERILGWSLEEIKNLN 717 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 +P+ + Q V I + + + RNG + A V+ ++G Sbjct: 718 ILAQLYPD--PDERQYVMNYIQSAEEKWE-DFKTRLRNGTTIDTSWAN--VKLSNGA--- 769 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKP-NIFSWDKRMFELYEIP 465 I +DI K E+ ++ ++ L A +W +++K ++ E Y Sbjct: 770 IIGIGQDITVRKHIEEALRESEQKYRLLFYANPNPLWVYDVKTLAFLEVNQAAIEHYGYS 829 Query: 466 PHIKPNWQVWYECVLP-EDRQHAEKVIRDS--LQSRSPFKLEFRITVKDGIRHIRALANR 522 + + P ED + E I + +RS + + R I + ++ Sbjct: 830 REEFLGMTL--RDIRPSEDVKILETYIANINPSFNRSGY-WQHR-KSNGEIIDVEITSHG 885 Query: 523 VLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNP 582 + G RL+ + D+TE + + L + + R + ++ +I +N Sbjct: 886 I-EFAGRQARLV-LVNDITEQLKAQQKLQESENRFRRAVIDAPLPILIHAEDGEIIQVNH 943 Query: 583 VAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSAD--TSRSAIEQDVVLHCRSGG 640 +++G+T E+ + +G+ ++ ++ E + + ++G Sbjct: 944 AWTELTGYTHEDIP--TIADWTEKAYGERKEIVRSVIDELYKIDGKVEEGEFTITIKTGE 1001 Query: 641 SYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQL 700 + ++S PL L + + + D+TE ++ QL ++A HD LT L NR ++ Sbjct: 1002 TRIWNFSSAPLGRLADNRRLIMSMALDITERKQAEEQLRHAAVHDQLTGLPNRILLLDRI 1061 Query: 701 RILLQTVNST-HQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLAR 759 ++ AL+FIDLDRFK VNDS GH GD LL +A + + +R D +AR Sbjct: 1062 EQAIKRTQQEEKYLFALLFIDLDRFKVVNDSLGHWVGDQLLGAIADKLKACVRPMDTVAR 1121 Query: 760 LGGDEFGLLLPD-CNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQA 818 GGDEF +LL + + A +A +I + F +G+ + S GIT A Sbjct: 1122 FGGDEFVILLENLTSRTEATKMAQQITDELRS-SFCLQGQDFFISVSIGITFPSSYEESA 1180 Query: 819 AEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGV 878 +E++ ADIA Y +K GR R T+++ + + + + + ++ +L++ + Sbjct: 1181 SELLRNADIAMYRAKEKGRARYTIFDSKMHIQATRLLELETNLRL-ALEREELIVHYQPI 1239 Query: 879 ASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA 937 S + + L +L W + +I F + L L V E +Q Sbjct: 1240 VS--LTTGKLLGFEALVRWEHPKKGLISPGEFIPIAEETGLIIPLGEWVLLESCRQMKAW 1297 Query: 938 VAS----KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESV 993 I +S+ LS L L+N L L+ + L + L L I ++++ E V Sbjct: 1298 QKEFSGLDKIRVSVNLSGKQLEYPHLINCLESILKQTGLEGKNLKLEITESMLMNNKEVV 1357 Query: 994 QKL----RLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITII 1049 L + +I + G + L D L +D + + ++ I Sbjct: 1358 SDLLLQIKGKNIQISIDDFGTGYSSLSYLHYLPVDTLKIDRSFVNRMTQLGENFEIVEAI 1417 Query: 1050 QGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQ 1091 A L M +A V + L +G + G + Sbjct: 1418 INLAHHLQMDVVAEGVETEQHIKQLKQLGCESGQGYFFSKPL 1459 Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats. Identities = 93/416 (22%), Positives = 186/416 (44%), Gaps = 15/416 (3%) Query: 283 MTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEEL 342 + + + + + + ++ ++ S +G+ + + + + + G+ +EE+ Sbjct: 395 VAIDITETKKTQMALQQAHQCLTFHVDNSPLGVIEWDNDYRVKRWSSQAEKIFGWKEEEV 454 Query: 343 RGLTFQQ--LTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHT 400 G +Q+ + EDL+ + +V ++I E + + + R Y + G+++ S+ Sbjct: 455 VGKGWQEWQFVYEEDLDLIVAKVSEIIKKETSRHFVTNRNYTKTGEIIDCKWYNSVQYDQ 514 Query: 401 DGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFE 460 G L ++ + D++E KR E Q ER+ LA E G IWEW L+ D+ ++ Sbjct: 515 SGEILSILSLVLDVSEQKRAEAALQVSQERLQLALEGSGDSIWEWNLQTGEIYCDQSWWQ 574 Query: 461 LYEIPP-HIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPF-KLEFRITVKDGIRHIRA 518 P H +++ W V PE E ++D L ++ + LE++I G + Sbjct: 575 KLGYEPDHETMSYEWWRSQVAPEFLPIHEASLQDYLAGKTEYLTLEYKIQSSSGDWVWMS 634 Query: 519 LANRVL--NKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMK 576 + + ++EG +++G + D+TE K++ E L Q+ E L +D I + ID Sbjct: 635 ARGKSVANDEEGNPLKIVGTHRDITESKEIEEELKQQGELLQTIVDYIPVMLAYIDPNYN 694 Query: 577 ITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHC 636 ++N E++ GW+ EE + +L L+ + +M I SA+ +D Sbjct: 695 FLWVNEEFERILGWSLEEIKNLNILAQLYPDPDERQYVMNYIQSAEEK----WEDFKTRL 750 Query: 637 RSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLAN 692 R+G + + S + +G+ IG + QD+T + + L S L AN Sbjct: 751 RNGTT--IDTSWANVKLSNGAIIG---IGQDITVRKHIEEALRESEQKYRLLFYAN 801 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 70/467 (14%), Positives = 162/467 (34%), Gaps = 52/467 (11%) Query: 273 FLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALC 332 +++ + + + + ++ + +S + +R +E + +G N+A Sbjct: 102 MIVVTVGRQLYLGQLNILKKIKQALKKSRSRYRAIVEEQTELICRFRPDGTLTFVNEAYY 161 Query: 333 QFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALL 392 ++ + E L F L D + L ++ L + + E R +G++ W Sbjct: 162 RYFEKTPEYLLEKIFLPLIPFPDQQQVLDNLKSLNQQK-RVITHEHRVIISSGEMRWHQW 220 Query: 393 AVSLVRHTDGTPLYFIAQIEDI--------------------------------NELKRT 420 + G + F A DI E + Sbjct: 221 TNRAIVDRQGKIIEFQAVGRDITELKQIETALRELNEELEQRVEQRTLQLEAQIQERQAV 280 Query: 421 EQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVL 480 E+ + + E I+++ + + +W + Sbjct: 281 EKALMESEAKYERLVERLPAVIYQFSPTKGKLYCSSYVKSILGYSTDEIDLPWLWINSIH 340 Query: 481 PEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDM 540 PED +++I++ +Q ++ F++E+R+ G H + + + G+ +D+ Sbjct: 341 PEDLPKVKEMIQEFVQGKN-FEIEYRVKDAQGQWHWILDRSIGRQAADQEMMIEGVAIDI 399 Query: 541 TEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPL 600 TE K+ AL Q + L +D+ V+ D ++ + AEK+ GW +EE +G Sbjct: 400 TETKKTQMALQQAHQCLTFHVDNSPLGVIEWDNDYRVKRWSSQAEKIFGWKEEEVVGKGW 459 Query: 601 LTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLH--CRSGGSYDVHYSITPLSTLDGSN 658 + ++ L+ S + V ++G D + + G Sbjct: 460 QEW-QFVYEEDLDLIVAKVSEIIKKETSRHFVTNRNYTKTGEIIDCKWYNSVQYDQSGEI 518 Query: 659 IGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQ 705 + + ++ DV+E ++ L S +++L++ L+ Sbjct: 519 LSILSLVLDVSEQKRAEAALQVS---------------QERLQLALE 550 Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats. Identities = 74/414 (17%), Positives = 155/414 (37%), Gaps = 20/414 (4%) Query: 277 LLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLG 336 +L + + + + + S+ + A+E S + + + +++ Q LG Sbjct: 518 ILSILSLVLDVSEQKRAEAALQVSQERLQLALEGSGDSIWEWNLQTGEIYCDQSWWQKLG 577 Query: 337 YSQEE--LRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAV 394 Y + + ++ PE L ++ ++G+ ++E + + +GD VW Sbjct: 578 YEPDHETMSYEWWRSQVAPEFLPIHEASLQDYLAGKTEYLTLEYKIQSSSGDWVWMSARG 637 Query: 395 -SLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFS 453 S+ +G PL + DI E K E+ +Q E + + + + + N Sbjct: 638 KSVANDEEGNPLKIVGTHRDITESKEIEEELKQQGELLQTIVDYIPVMLAYIDPNYNFLW 697 Query: 454 WDKRMFELYEIPPHIKPNWQVWYECV-LPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG 512 ++ + N + + P++RQ+ I+ + + FK R Sbjct: 698 VNEEFERILGWSLEEIKNLNILAQLYPDPDERQYVMNYIQSAEEKWEDFKTRLRNGTTID 757 Query: 513 IRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCID 572 V G ++GI D+T K + EAL + +++ + + + D Sbjct: 758 TSW-----ANVKLSNG---AIIGIGQDITVRKHIEEALRESEQKYRLLFYANPNPLWVYD 809 Query: 573 MA-MKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQD 631 + + +N A + G+++EE LG+ L + + Y A+ + S Sbjct: 810 VKTLAFLEVNQAAIEHYGYSREEFLGMTLRDIRPSEDVK----ILETYIANINPSFNRSG 865 Query: 632 VVLHCR-SGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASH 684 H + +G DV + + G VLV D+TE K ++L S + Sbjct: 866 YWQHRKSNGEIIDVEITSHGIEFA-GRQARLVLV-NDITEQLKAQQKLQESENR 917 >UniRef50_C6P1Y8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Y8_9PROT Length = 812 Score = 645 bits (1664), Expect = 0.0, Method: Composition-based stats. Identities = 131/597 (21%), Positives = 245/597 (41%), Gaps = 25/597 (4%) Query: 522 RVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMN 581 V ++GE + + + + ++ + + + S +A++ D I +N Sbjct: 218 PVKLEQGEQDEIGKLGLAFNQMSEALSNSERSMKLAASIYQSNADAIMVTDENNLIVDVN 277 Query: 582 PVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGS 641 P +++G+T +E G + + + +++ A + + ++ ++G Sbjct: 278 PAFTRITGYTLDEVRGKNPR--IMQSGKHDNEFYRHMWQAILNEGHWQGEIWDKRKTGEI 335 Query: 642 YDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLR 701 Y I+ L DG V D+TE ++ + + A++DALT L NR +L Sbjct: 336 YAKLAHISILRRSDGGVYRHVAQFSDITEKKQKDELIFWQANYDALTCLPNRRLLNDRLA 395 Query: 702 ILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLG 761 L AL+F+DLD+FK +ND+ GHA GD LL E+A + S +R D +AR+G Sbjct: 396 HALAANKRNEDCGALMFLDLDKFKTLNDTLGHAYGDMLLVEVARRIKSCVREVDTVARIG 455 Query: 762 GDEFGLLLPDCNVE------SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNN 815 GDEF +LL + + +A IA +I ++++ + ++H S G++LI N Sbjct: 456 GDEFVVLLENLGADIKDATQAAAHIAEKIRASLS-TPYQLHDKMHHSSPSIGVSLIHCNG 514 Query: 816 HQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLA 875 A E++ QAD+A Y +K GR V ++PQ + AA+ D + + E QL + Sbjct: 515 ESAEELIKQADMAMYQAKEAGRNAVRFFDPQMQQSVETIAALESDLR-HAVHERQLQLFY 573 Query: 876 HGVASPRIPEARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQA 934 + +L W ++ F + +L + V E +Q Sbjct: 574 QIQLD---HTHHPVGAEALLRWIHPVRGMVSPAQFIPFAEESSLILDIGHWVLDEACRQI 630 Query: 935 AKA---VASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE 991 A ++ + +++ +S V + + + P L L + L+ + Sbjct: 631 AAWSHQERTRDLVLAVNISARQFKQPDFVEQVGAMIRKHAIQPARLKLELTESIALEELD 690 Query: 992 ----SVQKLR-LAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLI 1046 + LR G + L G + LK D + +D ++ + D +++ Sbjct: 691 VIITKMHALRNGLGISLSLDDFGTGYSSLSYLKRLPLDQIKIDQSFVRDMTVDSGDAVMV 750 Query: 1047 TIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPL---DLLVNSS 1100 I A G++ IA V L G L G + PL + L+ + Sbjct: 751 KTIIDMAHNFGIEVIAEGVETAGQFFLLKQYGCLLFQGYLFGRPVPLREFEALLQQT 807 Score = 73.4 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 51/377 (13%), Positives = 134/377 (35%), Gaps = 17/377 (4%) Query: 262 TYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFR---NAMEYSAIGMALV 318 S ++P L + + + AF + +S SE + + + +A + + Sbjct: 208 QLSGSMEQFVPVKLEQGEQDEIGKLGLAFNQMSEALSNSERSMKLAASIYQSNADAIMVT 267 Query: 319 GTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEK 378 + N A + GY+ +E+RG + + + N+ + + + I E + + E Sbjct: 268 DENNLIVDVNPAFTRITGYTLDEVRGKNPRIMQSGKHDNEFYRHMWQAILNEGH-WQGEI 326 Query: 379 RYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAG 438 + G++ L +S++R +DG +AQ DI E K+ +++ L Sbjct: 327 WDKRKTGEIYAKLAHISILRRSDGGVYRHVAQFSDITEKKQKDELIFWQANYDALTCLPN 386 Query: 439 GIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSR 498 + + + + +KR + + ++ + + + ++S Sbjct: 387 RRLL--NDRLAHALAANKRNEDCGALMFLDLDKFKTLNDTLGHAYGDMLLVEVARRIKSC 444 Query: 499 -SPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERL 557 RI + + + L + + + +++ +Q +++ Sbjct: 445 VREVDTVARIGGDEFVVLLENLGADIKDATQAAAHIA------EKIRASLSTPYQLHDKM 498 Query: 558 HITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMEN 617 H + SIG +++ + + M+ + +EA G + + + Sbjct: 499 HHSSPSIGVSLIHCNGESAEELIKQA--DMAMYQAKEA-GRNAVRFFDPQMQQSVETIAA 555 Query: 618 IYSADTSRSAIEQDVVL 634 + +D + E+ + L Sbjct: 556 L-ESDLRHAVHERQLQL 571 >UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1I4_ACIDE Length = 830 Score = 645 bits (1664), Expect = 0.0, Method: Composition-based stats. Identities = 155/721 (21%), Positives = 293/721 (40%), Gaps = 32/721 (4%) Query: 397 VRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEW--ELKPNIFSW 454 VR A L+ T + ++ + G W + + W Sbjct: 113 VRDVSEVETLRAALAACERSLEETRRELREQSDVFNTMEGLARTGHWRRIEDPGETVLLW 172 Query: 455 DKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD-GI 513 + ++ + + +LPEDR EK + + + +E+R D + Sbjct: 173 SPGLCDIAGFDRQEWVSPERAVSGILPEDRHVFEK----AREKVAGADIEYRWRRPDGEV 228 Query: 514 RHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQE----KERLHITLDSIGEAVV 569 R +R+ R + +G + G+ D+TE + E L ++ + I E + Sbjct: 229 RWMRSRVRRARSGDGMRVEM-GVVQDVTEEHRSAEQLREQLLFIQRIASRIPGFIYEYRM 287 Query: 570 CIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIE 629 D A + +++ + G E+ + L + + D + + ++ + + + Sbjct: 288 HNDGASSVPYISDAVREFMGVNPEDVMRDHGLLMRSVVPDDAAHVRRSAVASLRNLAPWQ 347 Query: 630 QDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTH 689 + + G + P DGS + + D+T+ ++ +++ A +DALT Sbjct: 348 CEYRVSMPDGSVRWHITNAIPHREPDGSVVSHGFTM-DITDRKRAEQEIERLAFYDALTG 406 Query: 690 LANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLS 749 L NR +L+ + + T Q AL+FIDLD FK +ND+ GH GD LL ++A+ +L+ Sbjct: 407 LPNRRMLLDRLQRAVAATSRTQQFGALLFIDLDNFKDLNDTLGHDMGDHLLSQVAARLLA 466 Query: 750 MLRSSDVLARLGGDEFGLLLPDCNVE------SARFIATRIISAVNDYHFIWEGRVHRVG 803 +R +D +AR GGDEF ++L E A +A ++++++N F G+ H Sbjct: 467 CVRETDTVARFGGDEFVVMLETLRPELTEAASQAEIVAEKLLASLNQ-PFALGGQQHYST 525 Query: 804 ASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQW 863 S GITL D E++ +AD+A Y +K GR ++P AA + R+ + D + Sbjct: 526 PSIGITLFGDERLSVDELLKRADLAMYQAKGAGRNTQRFFDPDMQAAVNARSNLEADLR- 584 Query: 864 RMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHAL 922 + + +L + V R AR L + +L W +I F L L Sbjct: 585 QGLARGELCVYYQPVVDHR---ARLLGVEALVRWRHPVRGMISPADFIPLAEQTGLILPL 641 Query: 923 DRRVFHEFFQQAAKA---VASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHL 979 ++V Q + ++ +S+S+ +S V ++L+ L+ PR L L Sbjct: 642 GQQVLQTACGQLQRWGERKQTRHLSVSVNVSARQFRQPGFVAEVLQTLQGCGADPRKLKL 701 Query: 980 IIPAEAILDHAE----SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCAN 1035 + +L E +++L+ G L G + LK D + +D + Sbjct: 702 ELTESLLLGDVEDTIARMEQLKREGVGFALDDFGTGYSSLSYLKRLPLDQVKIDQGFVRD 761 Query: 1036 VQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDL 1095 V + D ++ I AQ L ++ +A V + L G + G + P++ Sbjct: 762 VLTDPNDAAIVRTILALAQSLDLEVVAEGVETTGQLAFLRLHGCEGFQGYLFGRPGPVED 821 Query: 1096 L 1096 + Sbjct: 822 I 822 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 51/286 (17%), Positives = 108/286 (37%), Gaps = 16/286 (5%) Query: 276 ILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMA--LVGTEGQWLQTNKALCQ 333 + + + R+ + E F + G + L + LC Sbjct: 119 VETLRAALAACERSLEETRRELREQSDVFNTMEGLARTGHWRRIEDPGETVLLWSPGLCD 178 Query: 334 FLGYSQEE-LRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALL 392 G+ ++E + PED + + EK+ +I E R+ +G+V W Sbjct: 179 IAGFDRQEWVSPERAVSGILPEDRHVFEKAREKVAGADI-----EYRWRRPDGEVRWMRS 233 Query: 393 AVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIF 452 V R DG + ++D+ E R+ + ++ + I I+E+ + + Sbjct: 234 RVRRARSGDGMRVEM-GVVQDVTEEHRSAEQLREQLLFIQRIASRIPGFIYEYRMHNDGA 292 Query: 453 ----SWDKRMFELYEIPPH-IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRI 507 + E + P + + + V+P+D H + SL++ +P++ E+R+ Sbjct: 293 SSVPYISDAVREFMGVNPEDVMRDHGLLMRSVVPDDAAHVRRSAVASLRNLAPWQCEYRV 352 Query: 508 TVKD-GIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQ 552 ++ D +R A +G V G MD+T+ K+ + + + Sbjct: 353 SMPDGSVRWHITNAIPHREPDGSVVS-HGFTMDITDRKRAEQEIER 397 >UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IR9_DECAR Length = 952 Score = 645 bits (1664), Expect = 0.0, Method: Composition-based stats. Identities = 141/691 (20%), Positives = 263/691 (38%), Gaps = 31/691 (4%) Query: 428 MERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHA 487 R+ A ++ S +K L P + + + Sbjct: 275 RSRLQALLSAIPDPVFVKNANGVFMSCNKAFERLLGAPEKSILGKTDY-DFFDKDLADFF 333 Query: 488 EKVIRDSLQSRSPFKLEFRITVK-DGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQL 546 + R + + P E + DG + L +G+ LGI D+T K++ Sbjct: 334 REKDRAATAAGRPLSNEEWLEFAADGYSGLFETTKTPLYLDGQAIGTLGIAHDITRRKRI 393 Query: 547 NEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHI 606 L L A++ D I +N + +G+ EE +G + Sbjct: 394 EADLR-----LAAAAFESQTAMLVTDANGVILRVNQAFLRDTGYAVEECVGQTPRILR-- 446 Query: 607 TFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQ 666 + + + ++ + S + ++ + G Y +I+ + G + + Q Sbjct: 447 SGRHDPAFYQKMWESIRSSGVWQGEIWDRRKDGSIYPKWLTISAVLGDSGEVTHYIGLHQ 506 Query: 667 DVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKA 726 DV+E + ++ A +D +T L NR +++L ++ ++ L+F+DLD FK Sbjct: 507 DVSERKLAESRIHQLAYYDQVTGLPNRILLQERLSQVMAKCRASSNYGVLLFVDLDNFKT 566 Query: 727 VNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESA------RFI 780 +ND+ GH GD LL+++ ++ R SD +ARLGGDEF +++ + + + Sbjct: 567 LNDTLGHNVGDLLLKQVGEVLRRCSRESDTVARLGGDEFAVIMSELGTDPSAAMQGAEAA 626 Query: 781 ATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRV 840 A ++S + F +HR S G TL +M Q D+A Y +K GR V Sbjct: 627 ARYLLSELGRT-FQLGNVIHRNTVSIGATLFKGEQESIESLMRQIDLAIYQAKGAGRNTV 685 Query: 841 TVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLW-LISLKLWSC 899 ++P A ERAA+ + I+E Q ++ + R + L+ Sbjct: 686 RFFDPSMEIALRERAAIE-EALRYAIEEEQFLLHYQAQIG---EDGRIEGAEVLLRWQHP 741 Query: 900 EGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK---GISISLPLSVAGLSS 956 E ++ F + L V + Q A+ S G+ +++ +S L Sbjct: 742 ERGMVSPAIFIPLAEETGDIVLLGSWVLKQAAAQLARWAESPVMAGLVLAVNVSAVQLRQ 801 Query: 957 ATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDL 1012 V + L + P L L + +++ E+ +Q L+ G L G Sbjct: 802 PDFVEQVTTVLREAGADPGRLKLELTESMLVNDVEATIAKMQSLKAIGIGFSLDDFGTGY 861 Query: 1013 QIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMD 1072 + LK L +D +V + D + + + A+ LG+ IA V + Sbjct: 862 SSLSYLKRLPLSQLKIDQSFVRDVLVDANDVAIASSVVALAKSLGLGVIAEGVETEAQRE 921 Query: 1073 TLSGIGVDLIYGEVIADAQPL---DLLVNSS 1100 L+GIG G + + P+ + LV+ + Sbjct: 922 LLAGIGCHCYQGYLFSRPLPIGDFERLVSGA 952 Score = 75.7 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 33/155 (21%), Positives = 58/155 (37%), Gaps = 1/155 (0%) Query: 276 ILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFL 335 + L + + A R+ E++ A S M + G L+ N+A + Sbjct: 371 LYLDGQAIGTLGIAHDITRRKRIEADLRLAAAAFESQTAMLVTDANGVILRVNQAFLRDT 430 Query: 336 GYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVS 395 GY+ EE G T + L Q++ + I + E ++G + L +S Sbjct: 431 GYAVEECVGQTPRILRSGRHDPAFYQKMWESIRSS-GVWQGEIWDRRKDGSIYPKWLTIS 489 Query: 396 LVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMER 430 V G ++I +D++E K E QL Sbjct: 490 AVLGDSGEVTHYIGLHQDVSERKLAESRIHQLAYY 524 Score = 73.4 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 49/292 (16%), Positives = 101/292 (34%), Gaps = 14/292 (4%) Query: 263 YLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEG 322 L+ H+ L++ A V+ FR + S + + + + G Sbjct: 241 NLLGHVYKAVAYLMVYRAMFDAGVLAPFREM--KLERS--RLQALLSAIPDPVFVKNANG 296 Query: 323 QWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRY-Y 381 ++ NKA + LG ++ + G T + +DL ++ ++ + S E+ + Sbjct: 297 VFMSCNKAFERLLGAPEKSILGKTDYDF-FDKDLADFFREKDRAATAAGRPLSNEEWLEF 355 Query: 382 NRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIG 441 +G + + + DG + + DI KR E R+ A Sbjct: 356 AADGYSGLFETTKTPL-YLDGQAIGTLGIAHDITRRKRIEADL-----RLAAAAFESQTA 409 Query: 442 IWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPF 501 + + I ++ D + + +S++S + Sbjct: 410 MLVTDANGVILRVNQAFLRDTGYAVEECVGQTPRILRSGRHD-PAFYQKMWESIRSSGVW 468 Query: 502 KLEFRITVKDGIRHIRALA-NRVLNKEGEVERLLGINMDMTEVKQLNEALFQ 552 + E KDG + + L + VL GEV +G++ D++E K + Q Sbjct: 469 QGEIWDRRKDGSIYPKWLTISAVLGDSGEVTHYIGLHQDVSERKLAESRIHQ 520 Score = 64.1 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 51/136 (37%), Gaps = 4/136 (2%) Query: 548 EALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHIT 607 + E+ RL L +I + V + N E++ G ++ LG Sbjct: 269 REMKLERSRLQALLSAIPDPVFVKNANGVFMSCNKAFERLLGAPEKSILGKTDYDFFDKD 328 Query: 608 FGDNGPLMENIYSADTSRSAIEQDVVLH-CRSGGSYDVHYSITPLSTLDGSNIGSVLVIQ 666 D E +A + + + L G S + TPL LDG IG++ + Sbjct: 329 LAD--FFREKDRAATAAGRPLSNEEWLEFAADGYSGLFETTKTPLY-LDGQAIGTLGIAH 385 Query: 667 DVTESRKMLRQLSYSA 682 D+T +++ L +A Sbjct: 386 DITRRKRIEADLRLAA 401 >UniRef50_Q2W5V0 Predicted signal transduction protein containing a membrane domain n=3 Tax=Magnetospirillum RepID=Q2W5V0_MAGSA Length = 820 Score = 645 bits (1663), Expect = 0.0, Method: Composition-based stats. Identities = 163/791 (20%), Positives = 303/791 (38%), Gaps = 30/791 (3%) Query: 312 AIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTW-PEDLNKDLQQVEKLISGE 370 + V G+++ + GYS EEL G+ L PED + V ++ Sbjct: 39 PDVLYSVDAAGRFIWVSPNAATVFGYSAEELVGMEAAALYAKPEDR---VGTVRRIRDAG 95 Query: 371 INTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMER 430 E ++G +WA + + +G I DI E+ +T + +R Sbjct: 96 GRAVRSEVEMRRKDGISIWAAIYACALMDGEGRITGINGAIRDITEIWQTRKTLGDSEDR 155 Query: 431 ITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKV 490 ++ I + I +K L+ W + + P D A+ + Sbjct: 156 FRRLSDVATEAI-CIHFQGKIIDMNKAFETLFAYSRDELLTMWAW-DVIDPRDISLAKSM 213 Query: 491 IRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEAL 550 + ++ E R KDG + ++ G+ R+ I D+T+ K+ ++ Sbjct: 214 VAQQYEA----PYEVRGIRKDGSVFPMEIHSKHSRMGGDSVRVTSI-RDLTQSKKAEASV 268 Query: 551 FQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGD 610 L ++ AV + + ++N ++G + +G PL + G Sbjct: 269 ----RLLSQAVEQSPVAVAVVGGDGMVQYVNSAHASLTGHSSSAVVGKPLSALYP---GK 321 Query: 611 NGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTE 670 G ++ + + + ++ ++ ++ + G + ++T +L I+DVT Sbjct: 322 AGAMLGDFWRTLLGQGELQGELQVNRQDGTWQWQQVHGSKVATPGEEGTHYLLQIEDVTL 381 Query: 671 SRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDS 730 + R+L + A D LT L NR +L + ++ L+F+DLD FKA+NDS Sbjct: 382 RKDQERRLQHQALFDGLTDLPNRVHALDRLAREIDMARDHGRKVGLLFVDLDGFKAINDS 441 Query: 731 AGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVN 789 GH GD LL A + V+AR GGDEF +++ D + +A +A I+ + Sbjct: 442 LGHEYGDELLVLAAERLRQAAGDGGVVARFGGDEFLVIMGDMEDGAAAGEVAAAIVDRFS 501 Query: 790 DYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAA 849 F R AS G+ L ++ ++ ADIA Y +K GR R + + Sbjct: 502 Q-PFTISRRDLISTASIGLALYPEDGRTQQTLLRNADIAMYQAKLAGRNRFCFFTSRMNE 560 Query: 850 AHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQT 908 R M + + R + +Q ++ + + + R + + +L W + E + Sbjct: 561 EAEARLRMEGELR-RAVGTDQFHLVYQPLVA--VATGRAVGVEALLRWSNPELGNVPPDR 617 Query: 909 FRRSFSDPALSHALDRRVFHEFFQQAAKAV--ASKGISISLPLSVAGLSSATLVNDLLEQ 966 F + A+ R V + A + V + + + +S A + D+ Sbjct: 618 FIPQAETCGVIVAIGRMVLETACRDARRWVEDGHADLRLCINVSPRQFQDAGFLGDVRAA 677 Query: 967 LENSPLPPRLLHLIIPAEAIL----DHAESVQKLRLAGCRIVLSQVGRDLQIFNSLKANM 1022 L S L P L L I +L D ++ L G ++ + G + L+ Sbjct: 678 LAGSGLSPANLELEITEGLLLTERGDVDTLLRTLTDMGVKLSIDDFGTGYSSLSYLERFP 737 Query: 1023 ADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLI 1082 D L +D + ++L+ I A LG++ IA V M L+ I D+ Sbjct: 738 FDTLKIDRSFMIGMLERQERKVLVETIVAMASGLGLEVIAEGVETAEQMAHLAAINCDIA 797 Query: 1083 YGEVIADAQPL 1093 G + + P Sbjct: 798 QGYLFSRPVPA 808 Score = 83.4 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 85/261 (32%), Gaps = 15/261 (5%) Query: 294 RKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWP 353 RK + +SE FR + + + + +G+ + NKA YS++EL + + P Sbjct: 146 RKTLGDSEDRFRRLSDVATEAICIH-FQGKIIDMNKAFETLFAYSRDELLTMWAWDVIDP 204 Query: 354 EDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIED 413 D++ V + E R ++G V + R + + I D Sbjct: 205 RDISLAKSMVAQQYEAP-----YEVRGIRKDGSVFPMEIHSKHSRMGGDSVR--VTSIRD 257 Query: 414 INELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQ 473 + + K+ E + ++ A E + + + + L Sbjct: 258 LTQSKKAEA----SVRLLSQAVEQSPVAVAVVGGDGMVQYVNSAHASLTGHSSSAVVGKP 313 Query: 474 VWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHI-RALANRVLNKEGEVER 532 + + P +L + + E ++ +DG + ++V E Sbjct: 314 L--SALYPGKAGAMLGDFWRTLLGQGELQGELQVNRQDGTWQWQQVHGSKVATPGEEGTH 371 Query: 533 LLGINMDMTEVKQLNEALFQE 553 L D+T K L + Sbjct: 372 YLLQIEDVTLRKDQERRLQHQ 392 Score = 66.1 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 58/165 (35%), Gaps = 2/165 (1%) Query: 280 ANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQ 339 + + + + K S A+E S + +A+VG +G N A G+S Sbjct: 247 GDSVRVTSIRDLTQSKKAEASVRLLSQAVEQSPVAVAVVGGDGMVQYVNSAHASLTGHSS 306 Query: 340 EELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRH 399 + G L +P L + + G+ E + ++G W + S V Sbjct: 307 SAVVGKPLSAL-YPGKAGAMLGDFWRTLLGQ-GELQGELQVNRQDGTWQWQQVHGSKVAT 364 Query: 400 TDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWE 444 +++ QIED+ K E+ Q L + + + Sbjct: 365 PGEEGTHYLLQIEDVTLRKDQERRLQHQALFDGLTDLPNRVHALD 409 Score = 65.3 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 47/121 (38%), Gaps = 3/121 (2%) Query: 558 HITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMEN 617 L + + + +D A + +++P A + G++ EE +G+ + G + Sbjct: 32 AALLRDLPDVLYSVDAAGRFIWVSPNAATVFGYSAEELVGMEAAALYAKPEDRVGTVRR- 90 Query: 618 IYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQ 677 D A+ +V + + G S L +G G I+D+TE + + Sbjct: 91 --IRDAGGRAVRSEVEMRRKDGISIWAAIYACALMDGEGRITGINGAIRDITEIWQTRKT 148 Query: 678 L 678 L Sbjct: 149 L 149 >UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K2_9PROT Length = 925 Score = 644 bits (1662), Expect = 0.0, Method: Composition-based stats. Identities = 125/603 (20%), Positives = 234/603 (38%), Gaps = 19/603 (3%) Query: 507 ITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGE 566 I + + L R++ + L+ + + L + R+ T E Sbjct: 315 IPRAQLLSRTKVLGERLIPVSTLLLGLIFFSSLKHARTHVRAQLAETDLRIAATAFESEE 374 Query: 567 AVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRS 626 +++ D I +N V +G+T EEA+G + T + ++ Sbjct: 375 SMIITDSRGIILKVNQVFTATTGYTSEEAVGKTPSLLK--TDRHSAEFYHEMWRQIKQTG 432 Query: 627 AIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDA 686 + ++ ++G Y +I + + +G V D+TE + ++ A +D Sbjct: 433 KWQGEIWDKRKNGEIYPKLLNIYAVKSKNGVVTHYVGSYTDLTERKMAEEKIISLAFYDT 492 Query: 687 LTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASL 746 LT L NR +L L + T + AL+FIDLD+FK +ND+ GH GD LL+++A Sbjct: 493 LTGLPNRRLLLDRLNYALASGLRTGKNGALLFIDLDKFKTLNDTLGHDIGDLLLKQVAHR 552 Query: 747 MLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIA------TRIISAVNDYHFIWEGRVH 800 + + +R D +AR+GGDEF ++L D N+ES A +I++A+ + + Sbjct: 553 LKACVREIDTVARIGGDEFVVMLEDLNIESVEAAAQTEVIGEKILAALRMPYQLLTNE-F 611 Query: 801 RVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLD 860 S GI+L +N E + QADIA Y +K GR ++ ++ + S RA + + Sbjct: 612 HSSVSIGISLFSNNGQSQDEPLKQADIAMYQAKKSGRNKLRFFDQRMQDTISSRANLEAE 671 Query: 861 EQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSH 920 + + + QL + + L+ II F + L Sbjct: 672 LR-KALANEQLQLHYQ--IQVDSAHQTIGAEVLLRWIHPVNGIISPAQFVPVAEETGLIL 728 Query: 921 ALDRRVFHEFFQQAAKAVASKG---ISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLL 977 + V Q K + + +++ +S ++ +E + P LL Sbjct: 729 PIGLWVLETACAQLKKWQDNPATAQLILAINVSARQFHQNGFATEVRSVIERHDINPALL 788 Query: 978 HLIIPAEAILDHAE----SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELC 1033 L + +L++ + +++ L+ G + L G LK L +D Sbjct: 789 KLELTEGMLLNNLDDTIATMRSLQEFGVQFSLDDFGTGYSSLQYLKRLPLAQLKIDQSFV 848 Query: 1034 ANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPL 1093 ++ D+ ++ I A L + IA V + L G + P+ Sbjct: 849 RDLATGYNDQAIVRTIIAMAHSLNLNVIAEGVETEIQRQILLKNQCSHFQGYLFGKPMPI 908 Query: 1094 DLL 1096 + Sbjct: 909 EQF 911 Score = 69.5 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 64/164 (39%), Gaps = 1/164 (0%) Query: 271 LPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKA 330 +P +LL + + +A R ++E++ S M + + G L+ N+ Sbjct: 332 IPVSTLLLGLIFFSSLKHARTHVRAQLAETDLRIAATAFESEESMIITDSRGIILKVNQV 391 Query: 331 LCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWA 390 GY+ EE G T L + ++ + I + + E +NG++ Sbjct: 392 FTATTGYTSEEAVGKTPSLLKTDRHSAEFYHEMWRQIK-QTGKWQGEIWDKRKNGEIYPK 450 Query: 391 LLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLA 434 LL + V+ +G +++ D+ E K E+ L TL Sbjct: 451 LLNIYAVKSKNGVVTHYVGSYTDLTERKMAEEKIISLAFYDTLT 494 >UniRef50_Q2BR92 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BR92_9GAMM Length = 944 Score = 644 bits (1662), Expect = 0.0, Method: Composition-based stats. Identities = 121/577 (20%), Positives = 241/577 (41%), Gaps = 18/577 (3%) Query: 536 INMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEA 595 +N TE + E+ + D+ E ++ ++ +N ++G++ +E Sbjct: 376 LNRKFTEYHREIESKQRALSLASQVFDNASEGIMVTGSDNRLLTVNDAFVDITGYSADEV 435 Query: 596 LGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLD 655 +G + + + +++ + ++ ++G + SI ++ Sbjct: 436 VGKNPKFLQ--SGRHDETFYRSMWQMINTSGYWRGEIWNRRKNGEVFPQWLSIQAVTDSA 493 Query: 656 GSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNST-HQRH 714 G + I D+TE +++ +L Y + D LT+L NR ++ L Q+ Sbjct: 494 GMARNYIASITDLTERKQVEEKLRYLSDFDPLTNLPNRRLLGYRVDQTLSLSRRQPDQQF 553 Query: 715 ALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN- 773 AL++IDLD FK +NDS GH GD +L+++A + ++R D ++RLGGDEF +L+P+ + Sbjct: 554 ALLYIDLDHFKNINDSLGHRFGDEILQKVAKRITELVREGDTVSRLGGDEFMILMPELHK 613 Query: 774 VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASK 833 +E A +A RI+ + + + S GI + ++ +++ AD A + +K Sbjct: 614 LEQAANLAERILHNIAQP--LENDSHLMITPSVGIAVYPNDGDSFDKLLRNADAAVHFAK 671 Query: 834 NGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLIS 893 GR Y + SER + + + + ++ + + + R + + + Sbjct: 672 RQGRNNYQFYTAEMNQRASERLQVEISLR-KAVENQEFELFYQPQLNLR--DGSLAGVEA 728 Query: 894 LKLWSCEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVA--SKGISISLPLS 950 L W ++ F + L + V E +Q A+ A ++ ++S+ +S Sbjct: 729 LIRWRHPNEGLVPPNRFIPLAEETGLILQIGSWVLVEACRQGAEWAAKSTEPFTMSVNVS 788 Query: 951 VAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLS 1006 V LV ++ L S L P+ L + I ++ E + +L+ G ++ L Sbjct: 789 VRQFR-PELVEEVRSALLTSGLSPKSLVIEITESTLMQDEEKTLTLLHELKELGVQLSLD 847 Query: 1007 QVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVV 1066 G LK D L +D +++ N D + + I A G+ T+A + Sbjct: 848 DFGTGYSSMAYLKRFNLDQLKIDRAFISDLPQNPDDAAITSAIIDVASHFGLVTVAEGIE 907 Query: 1067 LPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNSSYFA 1103 P + L+ +G G P + L YFA Sbjct: 908 KPEQAEFLASVGCIEGQGYYYEKPIPANDLTER-YFA 943 Score = 80.7 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 30/144 (20%), Positives = 60/144 (41%), Gaps = 1/144 (0%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 E + + + + ++ G+ + G++ + L N A GYS +E+ G + L Sbjct: 385 REIESKQRALSLASQVFDNASEGIMVTGSDNRLLTVNDAFVDITGYSADEVVGKNPKFLQ 444 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 + + ++I + E +NG+V L++ V + G +IA I Sbjct: 445 SGRHDETFYRSMWQMI-NTSGYWRGEIWNRRKNGEVFPQWLSIQAVTDSAGMARNYIASI 503 Query: 412 EDINELKRTEQVNQQLMERITLAN 435 D+ E K+ E+ + L + L N Sbjct: 504 TDLTERKQVEEKLRYLSDFDPLTN 527 >UniRef50_Q474K3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=cellular organisms RepID=Q474K3_RALEJ Length = 968 Score = 644 bits (1661), Expect = 0.0, Method: Composition-based stats. Identities = 198/678 (29%), Positives = 315/678 (46%), Gaps = 11/678 (1%) Query: 427 LMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNW-QVWYECVLPEDRQ 485 ER+ LA G+W+W+++ + R ++ P P+ + + P D Sbjct: 268 SEERLQLAVGGSNDGLWDWDVRSGKLYFSPRCAQMLGFEPDALPHARETLLGLLHPADLN 327 Query: 486 HAEKVIRDSLQSRSPFKLEFRITVK-DGIRHIRALANRVLNKEGEVERLLGINMDMTEVK 544 + + L+ P+ FR+ DG +RA V +G V R+ G D++E K Sbjct: 328 GFDDKLWRHLRRGDPYDANFRLRTSGDGYLWVRARGRLVRGDDGRVMRMAGSLTDISEHK 387 Query: 545 QLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVL 604 + LF EKER +TL +IG+AVV D+ +I +NP AE ++GW +EEA G L V Sbjct: 388 RYEFQLFAEKERAQVTLQAIGDAVVTTDVWGRIESLNPAAEALTGWREEEARGRLLQQVC 447 Query: 605 HITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLV 664 + + + N+ + + +L R G + V S+ + IG V+V Sbjct: 448 ALCDEGSEAPLRNLVALALQQRWPGMTALLTGRGGRAVAVKPSVALIRDRSAQAIGVVVV 507 Query: 665 IQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRF 724 + D+ R+ +L++ ASHDALT L NR FE++L + V T HAL+++DLD+F Sbjct: 508 LHDIRHEREHAARLAHEASHDALTGLVNRTEFERRLAAAIARVRVTSGTHALMYLDLDQF 567 Query: 725 KAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRI 784 K VND+ GHAAGD L+R++A++M + LR D LARLGGDEFG+LL C A IA + Sbjct: 568 KVVNDTCGHAAGDELIRQMAAVMRAQLRKGDTLARLGGDEFGILLEHCPAPDAERIAESL 627 Query: 785 ISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYE 844 AV + F R VG S G+ +D + AE MS AD ACY +K GR RV VY Sbjct: 628 RRAVAGFRFTHRQRTFAVGVSIGLVALDGDTGGVAEAMSAADAACYVAKENGRNRVQVYH 687 Query: 845 PQQAAAHSERAAMSLDEQ-WRMIKENQLMMLAHGVASPR-IPEARNLWLISLKLWSCEGE 902 PQ + M + + + + + + + L++ + Sbjct: 688 PQDTVVQARHGEMEWVSRVHAALAAGRFCLYEQEIVPLNGQRQGGKHVELLLRMVDERNQ 747 Query: 903 IIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISI---SLPLSVAGLSSATL 959 ++ F + L +DR V F A+ A I ++ LS + L+ Sbjct: 748 LVPPMAFVPACERYNLMPMIDRWVVETAFVTLAQRRAESAEDIALCAINLSASSLADVRF 807 Query: 960 VNDLLEQLENSPLPPRLLHLIIPAEAILDH----AESVQKLRLAGCRIVLSQVGRDLQIF 1015 + EQ + + + + I A + + A +++++ GC L G + F Sbjct: 808 PTFIREQAQRTGVALSGICFEITETAAISNLAQAAAFIEQMQALGCVFALDDFGAGMASF 867 Query: 1016 NSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLS 1075 LK A YL +DG + + ++++++ +IQ +G KTIA V + L Sbjct: 868 IYLKHLPAAYLKIDGSFVREMLEDPVNQVMVEVIQRIGHAMGKKTIAEHVETEAELARLR 927 Query: 1076 GIGVDLIYGEVIADAQPL 1093 +GVDL+ G IA P Sbjct: 928 ELGVDLVQGHHIAPPVPF 945 Score = 83.4 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 82/266 (30%), Gaps = 7/266 (2%) Query: 300 SETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEEL--RGLTFQQLTWPEDLN 357 SE + A+ S G+ L + Q LG+ + L T L P DLN Sbjct: 268 SEERLQLAVGGSNDGLWDWDVRSGKLYFSPRCAQMLGFEPDALPHARETLLGLLHPADLN 327 Query: 358 KDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINEL 417 ++ + + + Y R +W LVR DG + + DI+E Sbjct: 328 GFDDKLWRHLR-RGDPYDANFRLRTSGDGYLWVRARGRLVRGDDGRVMRMAGSLTDISEH 386 Query: 418 KRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPN--WQVW 475 KR E ER + +A G + ++ I S + L Q Sbjct: 387 KRYEFQLFAEKERAQVTLQAIGDAVVTTDVWGRIESLNPAAEALTGWREEEARGRLLQQV 446 Query: 476 YECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLG 535 ++ +LQ R P ++ + ++ + ++ Sbjct: 447 CALCDEGSEAPLRNLVALALQQRWPGMTALLTGRGGRAVAVKPSVALIRDRSAQAIGVVV 506 Query: 536 INMDMTEVKQLNEALFQEKERLHITL 561 + D+ + A E H L Sbjct: 507 VLHDI--RHEREHAARLAHEASHDAL 530 >UniRef50_A5GBG4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=A5GBG4_GEOUR Length = 709 Score = 643 bits (1660), Expect = 0.0, Method: Composition-based stats. Identities = 124/570 (21%), Positives = 227/570 (39%), Gaps = 17/570 (2%) Query: 540 MTEVKQLNEALFQEK--ERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALG 597 MT +K + QEK +L ++ A++ D + I ++NP +++G+T E +G Sbjct: 128 MTSIKWERQIREQEKFIRKLSRAVEQSPVAIIITDTSGTIEYVNPRFTQLTGYTSAETIG 187 Query: 598 VPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGS 657 + ++ + + ++G Y SI+P++ + Sbjct: 188 KKPHILKSGETPPEE--YRKLWEIISGGGEWWGEFHNRKKNGELYWASASISPITNGNEQ 245 Query: 658 NIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALV 717 + +D+TE ++ + A +D LT L NR F + + + L + ++ A++ Sbjct: 246 ITHFIAFQEDITERKQAEETIKQMAYYDTLTGLPNRHLFNELMHLALAQAHRHNRLLAVL 305 Query: 718 FIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLR-SSDVLARLGGDEFGLLLPDCN-VE 775 F+DLDRFK +ND+ GH GD LL+ A + R D +AR GGDEF +LLPD + V+ Sbjct: 306 FLDLDRFKHINDTLGHTVGDQLLQASAHRLKECCRRDRDTVARRGGDEFIILLPDIDDVQ 365 Query: 776 SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNG 835 A +A +II A F+ + GI++ ++ ++ AD+A Y +K Sbjct: 366 EAVRVAQKIIDAFTQ-VFVLPDIELFISTCIGISIFPNDGRDTETLIKNADMAMYRAKEQ 424 Query: 836 GRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLK 895 GR R +Y R M + + ++ + + + I + + L +L Sbjct: 425 GRSRYHLYTSSMDEQAFRRLTME-NSLRKALQREEFSLYYQPKVN--IKTGQIVCLEALV 481 Query: 896 LWS-CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVA--SKGISISLPLSVA 952 W E +I F D L L V Q + +++ S Sbjct: 482 RWQNPEMGLILPNQFIPLAEDTGLIIPLGEWVLRTACAQNKTWQLLNYPPMRVAVNFSPR 541 Query: 953 GLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLSQV 1008 L + + + L + L P L L + +L + E ++ +L G I + Sbjct: 542 QFQQPRLTDMVEQILGEADLAPCWLELELTENVMLQNVEKTVQTLNRLSNLGIHISIDDF 601 Query: 1009 GRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLP 1068 G + +K L +D ++ N D + + AQ L + IA V Sbjct: 602 GTGYSSLSYIKKLPIQTLKIDRSFVHDINTNADDAAIAIAVITMAQSLRLNVIAEGVETL 661 Query: 1069 LVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 M L G+ + G + + P+ + Sbjct: 662 EQMKLLDGLNCPEMQGYLFSKPLPVAEMTT 691 Score = 94.6 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 4/144 (2%) Query: 294 RKHISESE---THFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQL 350 + I E E A+E S + + + T G N Q GY+ E G L Sbjct: 134 ERQIREQEKFIRKLSRAVEQSPVAIIITDTSGTIEYVNPRFTQLTGYTSAETIGKKPHIL 193 Query: 351 TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQ 410 E ++ +++ ++ISG + E +NG++ WA ++S + + + +FIA Sbjct: 194 KSGETPPEEYRKLWEIISG-GGEWWGEFHNRKKNGELYWASASISPITNGNEQITHFIAF 252 Query: 411 IEDINELKRTEQVNQQLMERITLA 434 EDI E K+ E+ +Q+ TL Sbjct: 253 QEDITERKQAEETIKQMAYYDTLT 276 Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 51/345 (14%), Positives = 101/345 (29%), Gaps = 56/345 (16%) Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP 466 I Q + +R + ++ + +++ A E + I + I + R +L Sbjct: 123 VIGQCMTSIKWERQIREQEKFIRKLSRAVEQSPVAIIITDTSGTIEYVNPRFTQLTGYTS 182 Query: 467 HIKPNWQVWYEC---VLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRV 523 + PE+ + ++I + + A + + Sbjct: 183 AETIGKKPHILKSGETPPEEYRKLWEIIS---GGGEWWGEFHNRKKNGELYWASASISPI 239 Query: 524 LNKEGEVERLLGINMDMTEVKQLNEALFQE---------------KERLHITLDSIGE-- 566 N ++ + D+TE KQ E + Q E +H+ L Sbjct: 240 TNGNEQITHFIAFQEDITERKQAEETIKQMAYYDTLTGLPNRHLFNELMHLALAQAHRHN 299 Query: 567 ---AVVCIDMAMKITFMNPVAEKMSG---------------WTQEEALGVPLLTVLHITF 608 AV+ +D+ + +N G + + I Sbjct: 300 RLLAVLFLDLD-RFKHINDTLGHTVGDQLLQASAHRLKECCRRDRDTVARRGGDEFIILL 358 Query: 609 GDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSIT-----PLSTLDGSNIGSVL 663 D + E + A A Q VL D+ I+ + DG + +++ Sbjct: 359 PDIDDVQEAVRVAQKIIDAFTQVFVLP-------DIELFISTCIGISIFPNDGRDTETLI 411 Query: 664 VIQDVTESRKMLR-QLSYSASHDALTHLANRAS-FEKQLRILLQT 706 D+ R + + Y ++ A R E LR LQ Sbjct: 412 KNADMAMYRAKEQGRSRYHLYTSSMDEQAFRRLTMENSLRKALQR 456 >UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacterium BLR9 RepID=C0INC4_9BACT Length = 765 Score = 643 bits (1660), Expect = 0.0, Method: Composition-based stats. Identities = 143/562 (25%), Positives = 248/562 (44%), Gaps = 17/562 (3%) Query: 542 EVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLL 601 + K + E LF E+E +TL+SI +AV+ D++ ITF+N VAEK++GW Q EALG P+ Sbjct: 191 DRKAIEEKLFAEQESARVTLNSIADAVISADLSGNITFLNSVAEKLTGWQQNEALGRPIA 250 Query: 602 TVL----HITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGS 657 +L IT G +E S A + L R G + S P+ G Sbjct: 251 DILKVVDEITREPRGSTVERPNQLHRSTKAPSNSI-LVRRDGSELPIDESRAPILDRQGQ 309 Query: 658 NIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALV 717 G+V V+ DV+ +R M ++++ A HD LT L NR + +LR + ++ A++ Sbjct: 310 IAGTVTVLHDVSVTRAMELKMAHLAQHDFLTDLPNRRVLDDRLRQAISLARRQGKQLAVL 369 Query: 718 FIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD-CNVES 776 F+D+DRFK +NDS GH GD L+ +A + + +R+SD +AR GGDEF +LL + + Sbjct: 370 FVDIDRFKHINDSLGHGMGDKALQSMAERLTTCVRASDTVARQGGDEFVILLAEVTTADD 429 Query: 777 ARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGG 836 A +A +I+SAV ++ AS GI+ ++ A ++ ADIA Y +K G Sbjct: 430 AAIVAKKILSAVA-LPHRIGRHELQISASIGISTCPNDADDAETLIKHADIAMYQAKEKG 488 Query: 837 RGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKL 896 R + +R ++ + ++ + ++ + + + +L Sbjct: 489 RNNYQFFRADMNERVLQRQSLESSLRL-ALERQEFLLHYQPKMN--LETGHITGMEALIR 545 Query: 897 W-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA--VASKGISISLPLSVAG 953 W E ++ +F D L + R V E +Q + + +++ +S Sbjct: 546 WRHPELGLVPPASFIGVAEDCGLMQPIGRWVLQEACRQVKEWMVAGLNPVPVAVNVSAVE 605 Query: 954 LSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLSQVG 1009 + ++ L + L PR L L + ++ AE + L+ AG ++ + G Sbjct: 606 FRRKHFFDGVISTLRETDLDPRYLELELTETVLMKEAEPTIAVLHALKSAGVKLAIDDFG 665 Query: 1010 RDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPL 1069 + L D L +D +V + +++ I G + L + IA V Sbjct: 666 TGYSSLSYLTRLPVDTLKIDRSFVTDVTTRTDNAAIVSAIIGMGKSLNLNVIAEGVETQE 725 Query: 1070 VMDTLSGIGVDLIYGEVIADAQ 1091 + L G + Sbjct: 726 QLALLRSHCCAEGQGYYFSRPV 747 Score = 45.6 bits (107), Expect = 0.010, Method: Composition-based stats. Identities = 17/166 (10%), Positives = 49/166 (29%), Gaps = 9/166 (5%) Query: 290 FRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQ 349 +A + + + R + A + G N + G+ Q E G Sbjct: 192 RKAIEEKLFAEQESARVTLNSIADAVISADLSGNITFLNSVAEKLTGWQQNEALGRPIAD 251 Query: 350 L------TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGT 403 + E +++ +L + R+G + + + + G Sbjct: 252 ILKVVDEITREPRGSTVERPNQLHRSTKAPSN--SILVRRDGSELPIDESRAPILDRQGQ 309 Query: 404 PLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKP 449 + + D++ + R ++ + + + + + L+ Sbjct: 310 IAGTVTVLHDVS-VTRAMELKMAHLAQHDFLTDLPNRRVLDDRLRQ 354 >UniRef50_Q31P31 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=Chroococcales RepID=Q31P31_SYNE7 Length = 1047 Score = 643 bits (1659), Expect = 0.0, Method: Composition-based stats. Identities = 168/746 (22%), Positives = 319/746 (42%), Gaps = 24/746 (3%) Query: 363 VEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQ 422 VE+ + G S +K + +G V A + + +++++ + E Sbjct: 297 VEEKLWGSFTIVSNQKPFIWSDGYVDLARSISRQLEIAIYQADLYQKIQQELSDRSKAEL 356 Query: 423 VNQQLMERITLANEAGGIGIWEWELK---PNIFSW-DKRMFELYEIPPHIK-PNWQVWYE 477 Q+ R + I+ ++L+ + F++ E+Y I P N V + Sbjct: 357 ALQESQTRFQRIADNLPGIIYGYKLRQDGTDQFTYISSGFREVYGIDPETALENSNVVWG 416 Query: 478 CVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD-GIRHIRALANRVLNKEGEVERLLGI 536 + PED ++ + I S Q+ +K+E+RI K+ ++ ++ A + GE G+ Sbjct: 417 MIHPEDIEYLKTSIIKSQQTLKTWKVEYRIITKNGELKWMQGRARPTRQENGE-TFWDGL 475 Query: 537 NMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEAL 596 +D+++ K++ L +ER + +++ + V +++P AE + G++ EE + Sbjct: 476 IIDISDRKKIEAELQTSEERYRLLAENMNDLVCLHQADGTYLYVSPSAEALLGFSSEEMV 535 Query: 597 GVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDG 656 G H D + + + A + + + + GG P+ G Sbjct: 536 GQNPYDFFHPEDCDR--IRDEAHQAVLMGAELPIVYRMRKKLGGYIWFETLTKPIMDDQG 593 Query: 657 SNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNS-THQRHA 715 IG +DVT+ ++ QL Y A HD+LT LANR ++L + L+ + ++A Sbjct: 594 VVIGLQTTSRDVTQRIEIQNQLQYDACHDSLTGLANRNLLIERLELSLKRSKRLQNYKYA 653 Query: 716 LVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNV- 774 ++F+DLDRFK +NDS GH GD LL +A + S++RS D+ ARLGGDEF +L+ D Sbjct: 654 VLFLDLDRFKVINDSLGHITGDQLLVSIAQKLQSIIRSHDLAARLGGDEFVVLVEDIQTF 713 Query: 775 ESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKN 834 + +A RI++A+ E R S GI A +++ AD A Y +K+ Sbjct: 714 DEPIKVAERILAAI-QVPLELEERSIYTSTSIGIVFGSHEYESATQLLRDADTAMYRAKS 772 Query: 835 GGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISL 894 GR R V++ + R + D + + I + ++ + + + +L Sbjct: 773 RGRARYEVFDSAMHSQALARLHLENDLR-QAIARQEFVLYYQPIIQLQ--TGKITGFEAL 829 Query: 895 KLWSCEGEII-DEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS----KGISISLPL 949 W E I + L ++D V ++ +Q ++ AS +S+S+ L Sbjct: 830 IRWQHPTEGIKLPIDLIPIAEETGLITSIDYWVLNQACRQLSEWQASYSQAADLSMSVNL 889 Query: 950 SVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVL 1005 S L L++++ L+ + + P L L I ++++ + + + G I + Sbjct: 890 SAQNLQHDHLMDEIQSVLQATKIKPGSLTLEITESMLIENTDQTIQLLAAINEQGIEISI 949 Query: 1006 SQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPV 1065 G + L + L +DG + + ++ I +LG+K IA + Sbjct: 950 DDFGTGYSSLSYLHKLPVNNLKVDGSFVRKITTESTNYQIVNTIIALNNQLGLKAIAEGI 1009 Query: 1066 VLPLVMDTLSGIGVDLIYGEVIADAQ 1091 +D LS +G G + A Sbjct: 1010 ETHEQLDLLSQLGYQYGQGYLFARPL 1035 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 52/341 (15%), Positives = 111/341 (32%), Gaps = 32/341 (9%) Query: 296 HISESETHFRNAMEYSAIGM--ALVGTEG--QWLQTNKALCQFLGYSQEELRGLT--FQQ 349 + ES+T F+ + + + +G Q+ + + G E + Sbjct: 357 ALQESQTRFQRIADNLPGIIYGYKLRQDGTDQFTYISSGFREVYGIDPETALENSNVVWG 416 Query: 350 LTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIA 409 + PED+ + K + T+ +E R +NG++ W R +G ++ Sbjct: 417 MIHPEDIEYLKTSIIK-SQQTLKTWKVEYRIITKNGELKWMQGRARPTRQENGE-TFWDG 474 Query: 410 QIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIK 469 I DI++ K+ E Q ER L E + + L Sbjct: 475 LIIDISDRKKIEAELQTSEERYRLLAENMNDLVCLHQADGTYLYVSPSAEALLGFSSEEM 534 Query: 470 PNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVK-DGIRHIRALANRVLNKEG 528 Q Y+ PED ++ + + +R+ K G L +++ +G Sbjct: 535 VG-QNPYDFFHPEDCDRIRDEAHQAVLMGAELPIVYRMRKKLGGYIWFETLTKPIMDDQG 593 Query: 529 EVERLLGINMDMTEVKQLNEA---------------------LFQEKERLHITLDSIGEA 567 V L + D+T+ ++ + + L + A Sbjct: 594 VVIGLQTTSRDVTQRIEIQNQLQYDACHDSLTGLANRNLLIERLELSLKRSKRLQNYKYA 653 Query: 568 VVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITF 608 V+ +D+ + +N ++G ++ L +++ Sbjct: 654 VLFLDLD-RFKVINDSLGHITGDQLLVSIAQKLQSIIRSHD 693 Score = 84.2 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 23/148 (15%), Positives = 48/148 (32%), Gaps = 1/148 (0%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + + + SE +R E + L +G +L + + LG+S EE+ G Sbjct: 479 ISDRKKIEAELQTSEERYRLLAENMNDLVCLHQADGTYLYVSPSAEALLGFSSEEMVGQN 538 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 PED ++ + + + + R + G +W + G + Sbjct: 539 PYDFFHPEDCDRIRDEAHQAVL-MGAELPIVYRMRKKLGGYIWFETLTKPIMDDQGVVIG 597 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLA 434 D+ + + Q +L Sbjct: 598 LQTTSRDVTQRIEIQNQLQYDACHDSLT 625 Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 61/438 (13%), Positives = 137/438 (31%), Gaps = 60/438 (13%) Query: 298 SESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLN 357 ES ++ +E + ++ + NK LCQ LG+ ++ G T+ L P DL+ Sbjct: 57 RESL-RYQQVVEAQTDLILRSRSDTTVVFANKPLCQVLGWQDGDISGQTWGNLVPPNDLS 115 Query: 358 KDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIED---- 413 + +++ L S E T+ R Y + + W + + G + + D Sbjct: 116 ELHEKIAGL-SLENPTFESLNRNYGADQRIKWIQWVNQGIFNDRGELIEIQSVGRDVTTL 174 Query: 414 INELKRTEQVNQQLM----------------ERITLANEAGGIGIWEWELKPNIFSWDKR 457 I ++ R + +N + + I ++ + I++ Sbjct: 175 IEQITREKTLNYVFEAIRNSLDLEVIFATATKELAKTLNGLDCYIVQYLEEQRIWTHVAE 234 Query: 458 MF-----------ELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKL--- 503 E+ ++ + + + V E+ Q+ I L +P Sbjct: 235 FQHDENQESRLGIEIQDLDNPFAEQLKKF-QVVRVENTQNINDKINRELAKSTPGAWLLV 293 Query: 504 ----------EFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQE 553 F I + + D+ + Q + + Sbjct: 294 PLIVEEKLWGSFTIVSNQKPFIWSDGYVDLARSISRQLEIAIYQADLYQKIQQELSDRSK 353 Query: 554 KE--------RLHITLDSIGEAVVCI----DMAMKITFMNPVAEKMSGWTQEEALGVPLL 601 E R D++ + D + T+++ ++ G E AL + Sbjct: 354 AELALQESQTRFQRIADNLPGIIYGYKLRQDGTDQFTYISSGFREVYGIDPETALENSNV 413 Query: 602 TVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGS 661 I D L +I + + + + + ++G + P +G Sbjct: 414 VWGMIHPEDIEYLKTSIIKSQQTLKTWKVEYRIITKNGELKWMQGRARPTRQENGE-TFW 472 Query: 662 VLVIQDVTESRKMLRQLS 679 +I D+++ +K+ +L Sbjct: 473 DGLIIDISDRKKIEAELQ 490 Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 19/134 (14%), Positives = 42/134 (31%), Gaps = 2/134 (1%) Query: 544 KQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTV 603 + + F+E R +++ + ++ + F N ++ GW + G + Sbjct: 49 RLAIDQYFRESLRYQQVVEAQTDLILRSRSDTTVVFANKPLCQVLGWQDGDISGQTWGNL 108 Query: 604 LHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVL 663 + D L E I E + + + + G I Sbjct: 109 VPPN--DLSELHEKIAGLSLENPTFESLNRNYGADQRIKWIQWVNQGIFNDRGELIEIQS 166 Query: 664 VIQDVTESRKMLRQ 677 V +DVT + + + Sbjct: 167 VGRDVTTLIEQITR 180 >UniRef50_Q3J9L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Nitrosococcus oceani RepID=Q3J9L4_NITOC Length = 811 Score = 643 bits (1659), Expect = 0.0, Method: Composition-based stats. Identities = 187/573 (32%), Positives = 293/573 (51%), Gaps = 9/573 (1%) Query: 536 INMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEA 595 + D+ + ++ +ALF EKE L ITL SIG+ V+ + + ++NPVAEK++GW+ ++A Sbjct: 238 LQRDIIKRQRAEQALFAEKELLQITLHSIGDGVITTNAEGIVEYLNPVAEKLTGWSCDKA 297 Query: 596 LGVPLLTVLHITFGD-NGPLMENIYSADTSRSAIE--QDVVLHCRSGGSYDVHYSITPLS 652 G+PL TV + P+ + I AIE V+ R+G Y + S P+S Sbjct: 298 RGLPLATVFRVIDEQTREPIADPIAQCLKEGGAIEIANHSVVISRNGQEYAIQDSAAPIS 357 Query: 653 TLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQ 712 + G +G VLV DVTE+R M RQ+++ A+HD+LT L NR FE +L +L T+ + Sbjct: 358 SRTGEVLGVVLVFSDVTEARHMTRQITHQATHDSLTGLVNRREFEHRLERVLATLKAESA 417 Query: 713 RHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC 772 +AL + DLDRFK +ND+ GH AGD LLR+++ ++ +R D LARLGGDEFG+LL C Sbjct: 418 EYALCYFDLDRFKVINDTCGHVAGDELLRQVSEVLRGQIRKRDTLARLGGDEFGVLLEHC 477 Query: 773 NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYAS 832 +++ A+ +AT I A+ D+ F WEG+ R+G S G+ I + A V+ AD ACYA+ Sbjct: 478 SLKQAQRVATAIHKAIEDFQFTWEGKSFRIGVSIGLVPITKASMGIAVVLKAADTACYAA 537 Query: 833 KNGGRGRVTVYEPQQAAAHSERAAMSL-DEQWRMIKENQLMMLAHGVASPRIPEARNLWL 891 KN GR R+ VY S R + R +KEN + + + + Sbjct: 538 KNKGRNRIHVYHETDKELASHRGEVQWMTRIHRALKENYFQVYFQPIIPLATEKEEKCYE 597 Query: 892 ISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSV 951 + L+L G ++ F + L+ +DR + F A+ + + LS Sbjct: 598 VFLRLEDGAGGVVLPGAFLPTAERYNLAVKIDRWMIANTFTWLAQNPE-PLRTCFINLSG 656 Query: 952 AGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH----AESVQKLRLAGCRIVLSQ 1007 L + T + ++EQLE +P+P + I A + ++ L+ GC+ L Sbjct: 657 HSLRNKTFLAFIIEQLEKTPIPSIQICFEITEAAATANLSCTIRFIKSLKSHGCKFSLDD 716 Query: 1008 VGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVL 1067 G L F LK D+L +DG ++ + +D ++ I Q + +TIA V Sbjct: 717 FGSSLSSFAYLKNLPVDFLKIDGLFVKDILDDPIDLAIVRSINEIGQIMKKQTIAEWVEK 776 Query: 1068 PLVMDTLSGIGVDLIYGEVIADAQPLDLLVNSS 1100 V++ L IGV+ G I QPL + + Sbjct: 777 EEVLEKLREIGVNYAQGYWINPPQPLTEMKSPQ 809 Score = 56.0 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 79/577 (13%), Positives = 170/577 (29%), Gaps = 38/577 (6%) Query: 67 GIALSCSLGNIAASILLFSTSSLNMT-WTTINIVEAVVGAVLLRKLLPWYNPLQNLADWL 125 G A S I ++ T + W + V+ L + + + + +WL Sbjct: 27 GQAASIVAALILIAVFWTVTPHRTLAGWAFFFTLVTVLRVGLAHRYARSPDHSKQVGEWL 86 Query: 126 RLALGSAIVPPLLGGVLVVLLTPGDDPLRA--FLIWVLSESIGALALVPLGLLFKPHYLL 183 + + G V+ L P + +W+ S GA+A + + L Sbjct: 87 AWFMTGIGISGATWGSAVIFLVPNGSLVHTGFAALWICGLSAGAIATFSIIKGAFFAFSL 146 Query: 184 RHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPR-MEAFLIFLTT 242 P L+ + T+ +++L + + SAVR+ + + L Sbjct: 147 PALLPSALYLIISGDMKEATVGGAQLMFLGF--------ISLSAVRMHKTLVQSLTLQFE 198 Query: 243 VMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESET 302 + + + + L + L AN+ ++ RAE+ +E E Sbjct: 199 NARLVDHLDTEKKKVEKLNEQLEKKVLKRTAELAQANANLQRDIIKRQRAEQALFAEKE- 257 Query: 303 HFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGL---TFQQLTWPEDLNKD 359 + + G+ EG N + G+S ++ RGL T ++ + Sbjct: 258 LLQITLHSIGDGVITTNAEGIVEYLNPVAEKLTGWSCDKARGLPLATVFRVIDEQTREPI 317 Query: 360 LQQVEKLI-SGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELK 418 + + + G + +RNG + + + G L + D+ E + Sbjct: 318 ADPIAQCLKEGGAIEIANHSVVISRNGQEYAIQDSAAPISSRTGEVLGVVLVFSDVTEAR 377 Query: 419 RTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYEC 478 + +L + + + L + +K + C Sbjct: 378 HMTRQITHQATHDSL---------------TGLVNRREFEHRLERVLATLKAESAEYALC 422 Query: 479 VLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINM 538 DR + + + IR LA ++ G + + Sbjct: 423 YFDLDRFKVINDTCGHVAGDELLRQVSEVLR-GQIRKRDTLARLGGDEFGVLLEHCSLKQ 481 Query: 539 D---MTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEA 595 T + + E E + V +M I + A+ + + Sbjct: 482 AQRVATAIHKAIEDFQFTWEGKSFRIGVSIGLVPITKASMGIAVVLKAAD--TACYAAKN 539 Query: 596 LGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDV 632 G + V H T + + A++++ Sbjct: 540 KGRNRIHVYHETDKELASHRGEVQWMTRIHRALKENY 576 >UniRef50_B8DSE5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DSE5_DESVM Length = 1251 Score = 643 bits (1658), Expect = 0.0, Method: Composition-based stats. Identities = 191/870 (21%), Positives = 332/870 (38%), Gaps = 71/870 (8%) Query: 285 MVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRG 344 + + +A + +SE+ R+ +++ + ++ + + N+A+ + G+S E+ G Sbjct: 328 LDITEQKAMQDQLSEAWRRLRDIIDFLPDAVLVLDASRRVIAWNRAMEEMTGHSASEMLG 387 Query: 345 LTFQQLTWP---EDLNKDLQQVEKLISGEINTYSMEKRYYNR-----------NGDVVWA 390 P E + + + Y+ + ++ G Sbjct: 388 RGNFAYALPFYGERIPLLGDWFFSPDMPQPSHYTRFSEHGDKLAAEAYVPTLFGGRGAHV 447 Query: 391 LLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPN 450 S +R +G I I DI E + ++ +R +A A GIWEWEL N Sbjct: 448 WTVASALRDGEGRLNGVIQTIRDITERHNQMRELEKSRQRYDMAISATNDGIWEWELDTN 507 Query: 451 IFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRD-SLQSRSPFKLEFRITV 509 R E+ P + + PEDR +R + + F+ EFRI Sbjct: 508 TLYHSPRCLEILGRAPDATLSPMAIAAILHPEDRLRVLTEVRRITGEDAERFEHEFRIRH 567 Query: 510 KDGI-RHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDS--IGE 566 DG R + A G + R+ G D+T+ KQ + + ++ + E Sbjct: 568 TDGTWRWVLARGAARRGPGGRLNRVAGALADITDHKQGDAIAGILFHIANAINETRDLDE 627 Query: 567 AVVCIDMAMK---------ITFMNPVAEKM-SGWTQEEALGVPLLTVLHITF-GDNGPLM 615 + I A++ I +N +++ + +E V HI+ P + Sbjct: 628 LFLSIHTALRRHVQAPNFFIALINEPEDRLDFAYFADE-RDARYNPVEHISDPAVQSPTL 686 Query: 616 ENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQ--------- 666 E I + + + D + GS + TPL + G IG+++V Sbjct: 687 EVIRTG--RQVHLHSDDIEARPVFGSRPAAWLGTPLRSR-GKVIGAMVVQHYEDSEFFSA 743 Query: 667 -DVT-------------ESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQ 712 D E ++ L++ A HD LT L NRA ++ +Q Sbjct: 744 RDAELMVPVAEQVAVAIERKQGEEMLTHLALHDPLTGLPNRALLLDRIERAIQRRRRNDS 803 Query: 713 -RHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD 771 R A++ +DLDRFK +NDS GH GD LL E+A M ++R+ D +ARLGGDEF LLL D Sbjct: 804 YRFAVLMLDLDRFKFINDSHGHTTGDNLLVEVARRMRPVVRAGDTVARLGGDEFALLLED 863 Query: 772 CN-VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACY 830 + I R+++A+ + +V R AS G+ L A ++ ADIA Y Sbjct: 864 VDSPRRIVQITRRLLAAL-ERPVRMGAKVVRTSASIGMVLRTQGYDTADALLRDADIAMY 922 Query: 831 ASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLW 890 +K G+GR V+ E + D ++ QL + V + + AR L Sbjct: 923 QAKAQGKGRFRVFNQSMHRHTMEMMTLEGDLSM-AMRRKQLYLEYQPVLA--VDGARLLG 979 Query: 891 LISLKLWSCEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA----VASKGISI 945 +L W + F + L + + V + A+ + + + Sbjct: 980 FEALVRWRHPTEGAVPPARFIPMAEETGLILRIGQWVLEQAAATLARWRATLPGAHDLYV 1039 Query: 946 SLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGC 1001 S+ LS S L + L ++ LPP L L I AI+ + ++ LR G Sbjct: 1040 SVNLSARQASQPNLTGRVARILSDTGLPPEALKLEITETAIMKDPDGALQRLEALRRLGV 1099 Query: 1002 RIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTI 1061 I + G L+ D L +D + V G+ + ++ + + LG+ + Sbjct: 1100 GIGIDDFGTGYSSLAYLQRFPVDTLKVDRSFVSAVAGDAENREIVRTVVTLGRSLGLHVV 1159 Query: 1062 AGPVVLPLVMDTLSGIGVDLIYGEVIADAQ 1091 A V ++ +G + G + Sbjct: 1160 AEGVETAEQFAIVAELGCHSVQGYHFSRPV 1189 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 59/458 (12%), Positives = 137/458 (29%), Gaps = 68/458 (14%) Query: 276 ILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFL 335 L A+ + + + + + +G+ V EG++ N + Sbjct: 155 ALPHAHAAASGQADASTQAVDLDRAREQYHAIFTNAPVGIFRVTPEGRYENVNPEYARIW 214 Query: 336 GY-SQEELRGLTF----QQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWA 390 G + EE+ Q P D + + ++ +G ++ ME R R+G + W Sbjct: 215 GCPTTEEMLECVSDIPRQMYANPADRQRFVGALQ--ATGRVDR--MELRLKRRDGSLFWG 270 Query: 391 LLAVSLVRHTD------------------------------------GTPLYFIAQIEDI 414 L++ LVR Y + DI Sbjct: 271 LVSARLVRGPAPAQAAQTGQIAKTGQTAGTGVTNGTYRADAKAGNAPAEVDYIDGFVLDI 330 Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQV 474 E K + + R+ + + + + +W++ M E+ Sbjct: 331 TEQKAMQDQLSEAWRRLRDIIDFLPDAVLVLDASRRVIAWNRAMEEMTGHSASEMLGRGN 390 Query: 475 WYECVL---------------PEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIR--HIR 517 + + P+ Q + + E + G R H+ Sbjct: 391 FAYALPFYGERIPLLGDWFFSPDMPQPSH--YTRFSEHGDKLAAEAYVPTLFGGRGAHVW 448 Query: 518 ALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKI 577 +A+ + + EG + ++ D+TE L + ++R + + + + + ++ Sbjct: 449 TVASALRDGEGRLNGVIQTIRDITERHNQMRELEKSRQRYDMAISATNDGIWEWELDTNT 508 Query: 578 TFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSA--IEQDVVLH 635 + +P ++ G + L + + I ++ + T A E + + Sbjct: 509 LYHSPRCLEILGRAPDATL--SPMAIAAILHPEDRLRVLTEVRRITGEDAERFEHEFRIR 566 Query: 636 CRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRK 673 G V G + D+T+ ++ Sbjct: 567 HTDGTWRWVLARGAARRGPGGRLNRVAGALADITDHKQ 604 Score = 94.2 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 52/339 (15%), Positives = 107/339 (31%), Gaps = 57/339 (16%) Query: 400 TDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMF 459 G + A + + E+ +GI+ + + + Sbjct: 152 QRGALPHAHAAASGQADASTQAVDLDRAREQYHAIFTNAPVGIFRVTPEGRYENVNPEYA 211 Query: 460 ELYEIP--PHIKPNWQVWYECVL--PEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRH 515 ++ P + + P DRQ ++ + ++E R+ +DG Sbjct: 212 RIWGCPTTEEMLECVSDIPRQMYANPADRQRFVGALQAT---GRVDRMELRLKRRDGSLF 268 Query: 516 IRALANRVL-------------------------------------NKEGEVERLLGINM 538 ++ R++ N EV+ + G + Sbjct: 269 WGLVSARLVRGPAPAQAAQTGQIAKTGQTAGTGVTNGTYRADAKAGNAPAEVDYIDGFVL 328 Query: 539 DMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGV 598 D+TE K + + L + RL +D + +AV+ +D + ++ N E+M+G + E LG Sbjct: 329 DITEQKAMQDQLSEAWRRLRDIIDFLPDAVLVLDASRRVIAWNRAMEEMTGHSASEMLGR 388 Query: 599 PLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRS-------------GGSYDVH 645 +G+ PL+ + + + G V Sbjct: 389 GNFAYALPFYGERIPLLGDWFFSPDMPQPSHYTRFSEHGDKLAAEAYVPTLFGGRGAHVW 448 Query: 646 YSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASH 684 + L +G G + I+D+TE +R+L S Sbjct: 449 TVASALRDGEGRLNGVIQTIRDITERHNQMRELEKSRQR 487 >UniRef50_Q55576 Slr0359 protein n=2 Tax=Cyanobacteria RepID=Q55576_SYNY3 Length = 1244 Score = 643 bits (1658), Expect = 0.0, Method: Composition-based stats. Identities = 169/833 (20%), Positives = 317/833 (38%), Gaps = 48/833 (5%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + + + + SE F + + G+ +V EG N A + + EL Sbjct: 413 VTQQKLAEQQLRASEEFFSSMIVTITDGLLIVDQEGIIQFVNPAAREMFKRQEGELLQQP 472 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 F + Q + E +G +V A + VS + G Sbjct: 473 FG-------IPFVADQ------------ATEITLTPLDGSMVVAEMRVSPIHWQKGKA-- 511 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIP- 465 F+ + DI E + + ++ E GIW + ++++ ++ Sbjct: 512 FLVSLRDITEQHQARLALAESEKKYRYIVELTSEGIWILDQDQQTTFANQQLADMLGYSV 571 Query: 466 -PHIKPNWQVWYECVL--PEDRQHAEKVIRDSLQ-----SRSPFKLEFRITVKDGIRHIR 517 ++ N + + PE + +K ++ + + ++F+ + Sbjct: 572 QEILEKNITAFVLVIHHLPESQNSHQKTLQSFPRCVLPNHGQVYDVQFQ-RRDGSVLWGL 630 Query: 518 ALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCID-MAMK 576 + ++ G L + D+T+ K +AL ++RL L SI + V D ++ Sbjct: 631 VSRSAWYDQWGNYRGELAMLTDITKRKSAEQALSASEQRLEGILGSIQDVVWSADAVSFA 690 Query: 577 ITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHC 636 ++NP + G + E + L+E + E + + Sbjct: 691 TLYLNPTTAMVYGQSL-EVCYQSQNFWFEQVHPGDRLLLEYHLQLLMEKDQTELEYRIVQ 749 Query: 637 RSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASF 696 G + + + + + D+TE + +L Y+A+HD+LT+L NR+ F Sbjct: 750 PGGKERWLFRRSQLVRDGEHQPLRIDSIDSDITERKLAAEKLHYNANHDSLTNLPNRSMF 809 Query: 697 EKQLRILLQT-VNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSD 755 +L LQ + R A++F+DLD FK +NDS GH+ GD LL+ +A + LR D Sbjct: 810 LDRLGHALQRNLRRRDLRFAVLFLDLDGFKIINDSLGHSCGDLLLQGIAHRLRQCLRPED 869 Query: 756 VLARLGGDEFGLLLPDCN-VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDN 814 LARLGGDEF +L+ + E +A RI + F G+ S GI L + Sbjct: 870 TLARLGGDEFTMLIENITCPEDVIAVAQRIHQELQK-PFNLNGQEIFTNTSIGIALNHPH 928 Query: 815 NHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMML 874 +V+ AD A Y +K G+GR ++ +R D + R I +L + Sbjct: 929 YGHPQDVLRDADTAMYRAKAAGKGRYAIFNQTMHHHAVQRLQRENDLR-RAIDRQELQLH 987 Query: 875 AHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQ 933 + + + + +L W E +I + F + L + + E +Q Sbjct: 988 YQPIVCLK--TGQLQGVEALVRWQHPEEGLILPEEFVAIAEETGLIVPMGDWILWEASRQ 1045 Query: 934 AAKA----VASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH 989 + + +S+ +S L L+ + E L ++ L P+ L L I ++D+ Sbjct: 1046 ILELKQSFPQLSHLQVSINVSSRQLRDQRLLKTVDEILSSTNLAPQDLKLEITESLLIDN 1105 Query: 990 ----AESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEML 1045 A+ ++ LR +I L G + L + + +D ++ N + + Sbjct: 1106 LNLAADVLKSLRQRNIQISLDDFGTGYSSLSYLHRFPINTIKVDRSFVNTMEPNNQNTAI 1165 Query: 1046 ITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 + I A LG+ IA + + L +G D G A P + L++ Sbjct: 1166 VHTIVTLAHTLGLDVIAEGIETERHLTQLHWLGCDAGQGYYFARPIPSEDLLD 1218 Score = 148 bits (375), Expect = 8e-34, Method: Composition-based stats. Identities = 74/467 (15%), Positives = 159/467 (34%), Gaps = 35/467 (7%) Query: 228 VRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANI----M 283 V L + + ++ +++ ++A PRT + I + Sbjct: 218 VELDLRISTKFRASPLLHNLGIVSGINLMVAGPRTAFGVLGVYSLTARKFTEEEIEFLKV 277 Query: 284 TMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEG---QWLQTNKALCQFLGYSQE 340 + A +R+ E + A++ S+ G+ + G + N+ G+++E Sbjct: 278 ASHILAAAIDRQEYEERLLLLQQAIDASSNGILITDALGSDNAVVYANQGFETITGFNRE 337 Query: 341 ELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRY--YNRNGDVVWALLAVSLVR 398 E+ G + L + + +Q+EKL + + E Y ++G W L +S + Sbjct: 338 EVIGQNCRFLLNEDRQGEQNKQLEKLRTAIAHGQECEVVLKNYRKDGASFWNHLYLSPIY 397 Query: 399 HTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRM 458 + + FI D+ + K EQ + E + G+ + + I + Sbjct: 398 NQQNFLVNFIGIQTDVTQQKLAEQQLRASEEFFSSMIVTITDGLLIVDQEGIIQFVNPAA 457 Query: 459 FELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRA 518 E+++ V I + S E R+ Sbjct: 458 REMFKRQEGELLQQPFGIPFV-----ADQATEITLTPLDGSMVVAEMRV----------- 501 Query: 519 LANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKIT 578 + + ++G+ L D+TE Q AL + +++ ++ E + +D + T Sbjct: 502 --SPIHWQKGKA--FLVSLRDITEQHQARLALAESEKKYRYIVELTSEGIWILDQDQQTT 557 Query: 579 FMNPVAEKMSGWTQEEALGVPLLTV------LHITFGDNGPLMENIYSADTSRSAIEQDV 632 F N M G++ +E L + L + + +++ DV Sbjct: 558 FANQQLADMLGYSVQEILEKNITAFVLVIHHLPESQNSHQKTLQSFPRCVLPNHGQVYDV 617 Query: 633 VLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLS 679 R G S + G+ G + ++ D+T+ + + LS Sbjct: 618 QFQRRDGSVLWGLVSRSAWYDQWGNYRGELAMLTDITKRKSAEQALS 664 >UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio RepID=A7K0U5_VIBSE Length = 815 Score = 643 bits (1658), Expect = 0.0, Method: Composition-based stats. Identities = 131/697 (18%), Positives = 259/697 (37%), Gaps = 26/697 (3%) Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQV 474 E R + + + + IW + ++ + ++ Sbjct: 132 QERTRHQTAATTPLPTLQEFIDCLEDHIWIKGMDGLYSMTNRSVENAWQKTNSEIIGKDD 191 Query: 475 WYECVLPEDRQHAEKVIRD-----SLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGE 529 + + AEK I + + + + +I + + + + V + +G Sbjct: 192 FALFSH----ERAEKFIEADNLVVATGTLNIVEECRQIDENNNPTWLETIKSPVRDNDGN 247 Query: 530 VERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSG 589 + +LG+ ++T K + L ++ E +V D I +N +++G Sbjct: 248 LIGILGMTRNITRRKMVETQLS----LASKIFNNSQEGMVITDRNANIIDVNTAFTQITG 303 Query: 590 WTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSIT 649 + EE +G + + + + ++ ++ + + + + G Y +I+ Sbjct: 304 YRSEEVIGKNPRILR--SGHHDQGFYKQLWHQLETKGQWKGEFINRKKDGSIYPQLATIS 361 Query: 650 PLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNS 709 + I + V +D++ + +L A +D LT+L NR L ++T + Sbjct: 362 AVMDDKNHLINYICVFEDISVRKAHEEKLQRMAFYDPLTNLPNRTHLLSLLEQHIETGHK 421 Query: 710 THQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLL 769 Q A +F+D+D FK +NDS GH GD LL +LA + +L + +AR+GGDEF ++L Sbjct: 422 NQQTFATLFLDIDHFKHINDSMGHFCGDQLLSKLAIRLQDILHLNAHVARIGGDEFVIIL 481 Query: 770 PDCNVESA-RFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIA 828 PD + + A I+S + RV S GI L + + ++ AD A Sbjct: 482 PDVHSDVALLETVGDILSVFQQPFDLANHDSLRVSTSIGIALYPRDGQDSETLLKNADTA 541 Query: 829 CYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARN 888 Y +K GR Y P + + I++ QL + + + + Sbjct: 542 MYLAKKNGRNGYAFYSPDLTDKSVSHVRIQ-SALHQAIEKQQLRLEFQPQYN--LEQHAI 598 Query: 889 LWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS--KGISI 945 + + +L W E ++ F L ++ V QQ + + I Sbjct: 599 VGVETLLRWQHPEFGLVPPADFIPIAEKTGLIQSIGEWVLLHACQQGNAWLEQGVEFGRI 658 Query: 946 SLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGC 1001 ++ +S L + + L + L + P + L L I +L + S+ +LR G Sbjct: 659 AVNVSALQLQQSNFIQRLSDILNQTGFPAQRLDLEITESFLLIDPQQAIASLNQLRELGI 718 Query: 1002 RIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTI 1061 I L G + LK + L +D ++V N ++ I + L +K + Sbjct: 719 EISLDDFGTGYSSLSYLKGLPINKLKIDRSFVSDVPSNSDSNAIVNAIIAMGKTLSLKVV 778 Query: 1062 AGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 A + D L G G + + + L Sbjct: 779 AEGIETQEQADYLFEKGCVYGQGYLFSRPVSAEKLFR 815 Score = 79.1 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 54/165 (32%), Gaps = 7/165 (4%) Query: 281 NIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQE 340 I + M RK + + S GM + + N A Q GY E Sbjct: 248 LIGILGMTRNITRRKMVETQLSLASKIFNNSQEGMVITDRNANIIDVNTAFTQITGYRSE 307 Query: 341 ELRGLTFQQL---TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLV 397 E+ G + L D Q +L + + E ++G + L +S V Sbjct: 308 EVIGKNPRILRSGHH--DQGFYKQLWHQLETK--GQWKGEFINRKKDGSIYPQLATISAV 363 Query: 398 RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGI 442 + +I EDI+ K E+ Q++ L N + Sbjct: 364 MDDKNHLINYICVFEDISVRKAHEEKLQRMAFYDPLTNLPNRTHL 408 Score = 72.2 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 45/288 (15%), Positives = 97/288 (33%), Gaps = 12/288 (4%) Query: 271 LPFLLILLPANIMTMVMYAFRAERKHISESETH----FRNAMEYSAIGMALVGTEGQWLQ 326 + L L + V ++ ER + T + ++ + + G +G + Sbjct: 111 VSAWLSALVGRMSFDVSSHYQQERTRHQTAATTPLPTLQEFIDCLEDHIWIKGMDGLYSM 170 Query: 327 TNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGD 386 TN+++ + E+ G L E K ++ +++ E R + N + Sbjct: 171 TNRSVENAWQKTNSEIIGKDDFALFSHERAEKFIEADNLVVATGTLNIVEECRQIDENNN 230 Query: 387 VVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWE 446 W S VR DG + + +I K E + G+ + Sbjct: 231 PTWLETIKSPVRDNDGNLIGILGMTRNITRRKMVETQLSLASK----IFNNSQEGMVITD 286 Query: 447 LKPNIFSWDKRMFELYEI-PPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEF 505 NI + ++ + + Q K + L+++ +K EF Sbjct: 287 RNANIIDVNTAFTQITGYRSEEVIGKNPRILRSGHHD--QGFYKQLWHQLETKGQWKGEF 344 Query: 506 RITVKDGIRHIR-ALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQ 552 KDG + + A + V++ + + + + D++ K E L + Sbjct: 345 INRKKDGSIYPQLATISAVMDDKNHLINYICVFEDISVRKAHEEKLQR 392 >UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacillus sp. WCH70 RepID=C5D2J8_GEOSW Length = 568 Score = 642 bits (1657), Expect = 0.0, Method: Composition-based stats. Identities = 116/547 (21%), Positives = 232/547 (42%), Gaps = 13/547 (2%) Query: 557 LHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLME 616 + E+++ D +I F+NP E ++G++ EE +G + + + + Sbjct: 18 AKNIFEYSNESIIITDAQNRILFVNPAFEIVTGYSAEEVIGKNPRILQ--SGMHDKQFYK 75 Query: 617 NIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLR 676 +++ + ++ + G Y +I+ + G+ V + D+TE ++ + Sbjct: 76 KMWNDIKQHGVWKGEIWNKRKDGELYLEWLTISVVKDQKGNMTNYVAMFSDITEHKRNVE 135 Query: 677 QLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAG 736 QL+ A +D LT++ NR EK+L +++ +Q AL+F+DLDRFK +ND+ GH G Sbjct: 136 QLTRLALYDTLTNVPNRYLLEKRLESIIRMSKKHNQSFALLFLDLDRFKNINDTLGHRVG 195 Query: 737 DALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIW 795 D LL+E A + MLR D +AR GGDEF ++LP+ ++ A ++A +I+ ++ F + Sbjct: 196 DMLLKETAQRLKRMLRKQDTIARFGGDEFVIILPNLKHIREAAYMAEKIVESLKR-PFCF 254 Query: 796 EGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERA 855 + + S GI++ + ++ AD A Y +K GR + +Y + Sbjct: 255 NHQEIYISTSIGISVYPYDGTDKETLIRMADRAMYQAKKNGRNQYALYHAGMHGNGKQLF 314 Query: 856 AMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFS 914 + + + ++ + + + + R + +L W E I F Sbjct: 315 QLETALR-KALERGEFELYYQPQLDIKTKQIRA--VEALIRWNHPEKGFISPGMFIPLAE 371 Query: 915 DPALSHALDRRVFHEFFQQAAK-AVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLP 973 + L + + + + + + + +S+ +S + L + +E+ + Sbjct: 372 ESGLITPISDWIMMQACEHLKQLQLRFPYVKMSINISPIYFQQIDFLKKLQKTIESVNVN 431 Query: 974 PRLLHLIIPAEAILDHA----ESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLD 1029 PRL+ L + A++ HA E + KL+ G I + G + L D L +D Sbjct: 432 PRLIELELTESAVMPHAEQSVERLTKLKTMGMSIAIDDFGTGFSSLSYLHRFPIDILKID 491 Query: 1030 GELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIAD 1089 + D ++ I A L ++ +A V L D + G ++ Sbjct: 492 RSFTKQLSRYQQDSAIVKAIIMMAHSLQIRVVAEGVETKKQYQILEKQSCDFVQGYYVSK 551 Query: 1090 AQPLDLL 1096 + L Sbjct: 552 PLSISEL 558 Score = 80.7 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 1/131 (0%) Query: 305 RNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVE 364 +N EYS + + + + L N A GYS EE+ G + L + +++ Sbjct: 19 KNIFEYSNESIIITDAQNRILFVNPAFEIVTGYSAEEVIGKNPRILQSGMHDKQFYKKMW 78 Query: 365 KLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVN 424 I + + E ++G++ L +S+V+ G ++A DI E KR + Sbjct: 79 NDIK-QHGVWKGEIWNKRKDGELYLEWLTISVVKDQKGNMTNYVAMFSDITEHKRNVEQL 137 Query: 425 QQLMERITLAN 435 +L TL N Sbjct: 138 TRLALYDTLTN 148 >UniRef50_C6X7I8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7I8_METSD Length = 821 Score = 642 bits (1657), Expect = 0.0, Method: Composition-based stats. Identities = 150/692 (21%), Positives = 281/692 (40%), Gaps = 23/692 (3%) Query: 417 LKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWY 476 KR E+ + + + + + + + + ++P Sbjct: 127 HKRMERELENSNRLFRVFMQNLPAIAFIKDQQGQYIFANASTVDALQLPHEQIIGKHDTL 186 Query: 477 ECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGI 536 P+ Q + +L + + + D ++ V + +G + GI Sbjct: 187 -LFPPQLAQEMRAAEQQTLAQGEAIQHVRQFPLADDVKLWLLTTFPVQDMDGNFNHIGGI 245 Query: 537 NMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCID---MAMKITFMNPVAEKMSGWTQE 593 +D+TE ++ EAL +++ ++ +D AM + ++N E ++G++ + Sbjct: 246 GIDITEQRKAEEALLLRNH----AIEASATPILIVDVTQPAMPLIYVNRAFELVTGYSSQ 301 Query: 594 EALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLST 653 EA+G + P +E I +A R + + + G + + P+ Sbjct: 302 EAVGRNCRFLQ--GHDREQPELEKIRTAIRERCPGYAILRNYRKDGSLFWNELYVAPVPD 359 Query: 654 LDG-SNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQ 712 G V V +D+TE R+ L A++D LT LANR +++++ + + Sbjct: 360 PHGGEPRYFVGVQKDITEIRQYQEALERQANYDTLTGLANRNLLKERMQQAISEARRHNW 419 Query: 713 RHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC 772 ++ FID+D FK VNDS GH+AGD L+R L + S LR D +ARLGGDEF LLL Sbjct: 420 TFSVAFIDIDNFKRVNDSMGHSAGDELIRLLGQRLQSCLRDGDTVARLGGDEFVLLLTSQ 479 Query: 773 NVESARF-IATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYA 831 +++ + + RI + + + FI GR V S G+ + A ++S AD A Y Sbjct: 480 SLDESIHTVVQRIRNTIIN-PFIITGRQLTVTCSIGLANFPHDGRNADTLLSNADSAMYQ 538 Query: 832 SKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWL 891 +K G Y + A R ++ D W ++ QL++ R ++ + + Sbjct: 539 AKASGSNNFRFYAKEMNAELGHRLSLEND-LWHALENQQLVLHYQPQVCMR--NSQIIGM 595 Query: 892 ISLKLWSCEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQ--AAKAVASKGISISLP 948 +L W +I F D L + V Q + I +++ Sbjct: 596 EALIRWQHPKLGMIPPLQFIPLSEDDGLIVPIGIWVMETAAHQNRQLQLAGYPPIRVAVN 655 Query: 949 LSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIV 1004 LSV L LV+ + + L++S L P+ L L I ++ + E ++ ++ G ++ Sbjct: 656 LSVRQLEQKDLVHCIEKTLQHSGLDPQCLELEITESMLMHNIEESIITLNRISDLGVQLS 715 Query: 1005 LSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGP 1064 L G + LK + L +D ++ D ++ I A L ++ IA Sbjct: 716 LDDFGTGYSSLSYLKRLPINRLKIDKSFINDITTTYNDAIIARSIIALAHSLEIQVIAEG 775 Query: 1065 VVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 V L G D + G +++ +P + + Sbjct: 776 VESADQYAFLLENGCDEVQGYLLSRPRPFEEM 807 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 67/359 (18%), Positives = 123/359 (34%), Gaps = 34/359 (9%) Query: 278 LPANIMTMVMYAF-----RAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALC 332 LP+ + + + A + + + S FR M+ + +GQ++ N + Sbjct: 110 LPSAVTSALERAEEKIMHKRMERELENSNRLFRVFMQNLPAIAFIKDQQGQYIFANASTV 169 Query: 333 QFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALL 392 L E++ G L +P L ++++ E+ + +++ + +W LL Sbjct: 170 DALQLPHEQIIGKH-DTLLFPPQLAQEMRAAEQQTLAQGEAIQHVRQFPLADDVKLW-LL 227 Query: 393 AVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIF 452 V+ DG + DI E ++ E+ L+ + A I I + Sbjct: 228 TTFPVQDMDGNFNHIGGIGIDITEQRKAEEAL--LLRNHAIEASATPILIVDVTQPAMPL 285 Query: 453 SWDKRMFEL-YEIPPHIKPNWQVWYECVLPEDRQHAE-KVIRDSLQSRSPFKLEFRITVK 510 + R FEL + DR+ E + IR +++ R P R K Sbjct: 286 IYVNRAFELVTGYSSQEAVGRNCRFLQGH--DREQPELEKIRTAIRERCPGYAILRNYRK 343 Query: 511 DGIRHIRALANRVLNKE--GEVERLLGINMDMTEVKQLNEALFQE--------------- 553 DG L + GE +G+ D+TE++Q EAL ++ Sbjct: 344 DGSLFWNELYVAPVPDPHGGEPRYFVGVQKDITEIRQYQEALERQANYDTLTGLANRNLL 403 Query: 554 KERLHITLDSIGEAVVCIDMAM----KITFMNPVAEKMSGWTQEEALGVPLLTVLHITF 608 KER+ + +A +N +G LG L + L Sbjct: 404 KERMQQAISEARRHNWTFSVAFIDIDNFKRVNDSMGHSAGDELIRLLGQRLQSCLRDGD 462 >UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteobacteria RepID=A6SVJ0_JANMA Length = 956 Score = 642 bits (1657), Expect = 0.0, Method: Composition-based stats. Identities = 122/569 (21%), Positives = 235/569 (41%), Gaps = 15/569 (2%) Query: 536 INMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEA 595 + D+ K L + + + ++I A + ++NP +++G++ EEA Sbjct: 376 LIADIAARKHAEHELQLRERAIEASANAIIIARAVA-PDYPLEYVNPAFTRITGYSPEEA 434 Query: 596 LGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLD 655 LG + + + P +E + S + + + + G + I P+ Sbjct: 435 LGRNIGFLWGKDWE--QPGIEELRSIALEKREGHAVLRNYRKDGALFWSDLYIAPVKDDT 492 Query: 656 GSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHA 715 G V+ + D+T +++ +L + + DALT LANR+ +L + + + Sbjct: 493 GEVSHFVVALYDITATKRYESELEFQTNRDALTGLANRSLLRDRLSQAISYAHRYNHPIW 552 Query: 716 LVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD-CNV 774 + F+DLDRFK VND+ GH AGD LL+ +A + +R +D ++R+GGDEF L+LP+ + Sbjct: 553 IAFVDLDRFKFVNDTLGHQAGDLLLKAIAERLQHAVRDTDTVSRMGGDEFVLILPERVDA 612 Query: 775 ESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKN 834 + I RI+ + EG + +S G+ + ++ E++ ADIA Y +K Sbjct: 613 GLSTGIVQRIMDGIAQ-PLTIEGHEFFISSSIGVAVYPNDGVTPEELIKHADIAMYRAKE 671 Query: 835 GGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISL 894 GR Y ER + D + ++ + ++ R + + + +L Sbjct: 672 TGRNNFQFYTSSMNERALERLRLEGDLR-NAMERGEFILHYQPQLDLR--TGKIVGVEAL 728 Query: 895 KLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQ--AAKAVASKGISISLPLSV 951 W E +I F + L + V E +Q + + +S+ LS Sbjct: 729 IRWQHPELGMIPPMRFIGLAEETGLIVPIGAWVIREACRQNKVWQEHGLGSLRMSVNLSA 788 Query: 952 AGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQ 1007 + L+ + LE + LPP+ L + + ++ + +++L+ G ++ + Sbjct: 789 RQFAQQDLLESIALALEETQLPPQCLEIELTESLVMADVDHAIGILRELKALGVQLSIDD 848 Query: 1008 VGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVL 1067 G + LK D L +D ++ + D ++ I A L + IA V Sbjct: 849 FGTGYSSLSYLKRFPIDVLKIDRSFVNDITTDPDDAAIVASIISLAHSLRLTVIAEGVET 908 Query: 1068 PLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 + L D I G + D + Sbjct: 909 EEQLAYLQQHDCDQIQGYFFSRPITADAM 937 Score = 76.5 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 82/215 (38%), Gaps = 30/215 (13%) Query: 248 LMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAER------------- 294 M+ + PS+L + + LL ++ A + +++ R + Sbjct: 313 SMVVSTPSMLFLKNSSSALWAFLVGLLLSVVSAIYVQLIVDRSRRIQLLVDDRTAQLRTV 372 Query: 295 ----------KHISESETHFR-NAMEYSAIGMAL---VGTEGQWLQTNKALCQFLGYSQE 340 + +E E R A+E SA + + V + N A + GYS E Sbjct: 373 NDDLIADIAARKHAEHELQLRERAIEASANAIIIARAVAPDYPLEYVNPAFTRITGYSPE 432 Query: 341 ELRGLTFQQLTWPEDLNK-DLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRH 399 E G W +D + ++++ + + +++ R Y ++G + W+ L ++ V+ Sbjct: 433 EALGRNIG-FLWGKDWEQPGIEELRSIALEKREGHAV-LRNYRKDGALFWSDLYIAPVKD 490 Query: 400 TDGTPLYFIAQIEDINELKRTEQVNQQLMERITLA 434 G +F+ + DI KR E + R L Sbjct: 491 DTGEVSHFVVALYDITATKRYESELEFQTNRDALT 525 >UniRef50_B7GKR7 Multidomain signal transduction protein (Contains PAS, GGDEF and EAL domains) n=2 Tax=Bacillaceae RepID=B7GKR7_ANOFW Length = 594 Score = 642 bits (1657), Expect = 0.0, Method: Composition-based stats. Identities = 127/549 (23%), Positives = 243/549 (44%), Gaps = 14/549 (2%) Query: 557 LHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLME 616 H + E ++ D I NP E ++G+TQEE LG + + + E Sbjct: 41 AHTIIQEADEGIIVTDSEGHILLANPAFETVTGYTQEEVLGKKPNILR--SGLHDRKFYE 98 Query: 617 NIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLR 676 N++ + ++ ++G + +I + + G+ V + DVT+ ++ + Sbjct: 99 NMWETIRDHGVWKGEIWNKRKNGELFVEWLTIKAVYDVAGNPTHYVAIFSDVTQHKRTME 158 Query: 677 QLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAG 736 QL+ +++D LT++ NR F K+L+ LL T +Q+ A++F+DLDRFK +ND GH +G Sbjct: 159 QLARLSNYDLLTNVPNRQLFTKRLQHLLDTARRYNQQLAILFLDLDRFKYINDELGHYSG 218 Query: 737 DALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIW 795 D LL+++A+ + +LR+ D LAR+GGDEF ++LP +++ A IA +II ++ F+ Sbjct: 219 DILLQKVANRLKKLLRTKDTLARIGGDEFVVILPKLKDIQEAVSIAEQIIESLQA-PFLL 277 Query: 796 EGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERA 855 + + AS GI++ ++ ++ +AD A +K GR R +Y + SE Sbjct: 278 HHKDIYISASIGISVYPNDGDDGEMLLRRADRAMQKAKESGRNRFELYTAKLD-YQSEVV 336 Query: 856 AMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFS 914 + + + I+ N+L + + + + + L +L W + F Sbjct: 337 TLE-NYLRKAIERNELFVCYQPIVNIKTKKIEAL--EALMRWKQPNIGFVSPAQFIPLAE 393 Query: 915 DPALSHALDRRVFHEFFQQA-AKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLP 973 + L + + +F + A + + I + +S V L ++ + Sbjct: 394 ETGLIVPMTKWLFEQACVHIKAIHQFAPHVKIGINISAVHFQQDDFVQQLSTIVKKHDVH 453 Query: 974 PRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLD 1029 PR L + I+ +AE + +L+ G ++ + G + L D L +D Sbjct: 454 PRFFKLELTESTIMPNAEESVQKLVQLKQCGFKLAIDDFGTGFSSLSYLHRFPIDILKID 513 Query: 1030 GELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIAD 1089 + D +++ I A L + +A V + L+ D+ G IA Sbjct: 514 QSFIRRLSLYSDDATIVSTIIMMAHHLHLSVVAEGVETEQQYEFLNKQQCDMAQGYYIAK 573 Query: 1090 AQPLDLLVN 1098 P+D + Sbjct: 574 PMPIDEVQQ 582 Score = 73.4 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 61/175 (34%), Gaps = 19/175 (10%) Query: 305 RNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT---FQQLTWPEDLNKDLQ 361 ++ + G+ + +EG L N A GY+QEE+ G + D Sbjct: 42 HTIIQEADEGIIVTDSEGHILLANPAFETVTGYTQEEVLGKKPNILRSGLH--DRKFYEN 99 Query: 362 QVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTE 421 E + + E +NG++ L + V G P +++A D+ + KRT Sbjct: 100 MWETIRDH--GVWKGEIWNKRKNGELFVEWLTIKAVYDVAGNPTHYVAIFSDVTQHKRTM 157 Query: 422 QVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWY 476 + +L L N PN + KR+ L + + + Sbjct: 158 EQLARLSNYDLLTN------------VPNRQLFTKRLQHLLDTARRYNQQLAILF 200 >UniRef50_Q2BPB1 Regulatory component of sensory transduction system n=2 Tax=Gammaproteobacteria RepID=Q2BPB1_9GAMM Length = 885 Score = 642 bits (1657), Expect = 0.0, Method: Composition-based stats. Identities = 146/695 (21%), Positives = 274/695 (39%), Gaps = 28/695 (4%) Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPH--IKPNW 472 EL + Q+ + + +A I+ + + +K I Sbjct: 196 RELHISRQILNRERGLLRGLIDALPDHIFIKDKEGKYLGCNKAFQSFTGHQEADLIGKTD 255 Query: 473 QVWYECVLP-EDRQHAEKVIRDSLQ-SRSPFKLEFRITVKDGIRHIRALANRVLNKEGEV 530 Q + E D+ +VI + L +R + E + + L+ +GE Sbjct: 256 QDFSESNHAITDKSDTLQVINNLLPINREAWTHE----QDGSPILLESQLAPFLDMDGEP 311 Query: 531 ERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGW 590 + ++GI+ D+TE ++ E + L ++ +VV ++ ++ ++N E ++G+ Sbjct: 312 QGIVGISRDITEKRKAEERIL----TLSQAVEQSPVSVVITNLKGEVEYVNSTFESVTGY 367 Query: 591 TQEEALGVPLLTVLHITFGDNGP-LMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSIT 649 +Q E LG + G P ++++ + + + ++G + I Sbjct: 368 SQAEVLGKDSSI---LKSGKTPPGRYADMWAKLVQGESWQGEFQNKKKNGEIFWEQAHIA 424 Query: 650 PLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNS 709 P+ +G + V QDVT+ + ++ + A D LT L NR +L ++ Sbjct: 425 PVLDAEGEVRHFLAVKQDVTKQKAQEEKILHQAHFDGLTELPNRFLAMHRLETMMHEAKR 484 Query: 710 THQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLL 769 + A++F+D+D FK VND+ GH GD +L E A + +R SD + RLGGDEF +L+ Sbjct: 485 NQHQIAVLFLDMDDFKKVNDTLGHDMGDKILVEAAKRLQGSVRDSDTIGRLGGDEFIVLI 544 Query: 770 PDCN-VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIA 828 E A IA ++ +GR + S GI L + +E++ AD A Sbjct: 545 NHLERPEQALPIAQNLLQQFRS-SLTIDGRDILLTMSIGIALYPGDGTTPSELLRNADSA 603 Query: 829 CYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARN 888 Y SK GR Y + + R + ++ + N+L +L V + + Sbjct: 604 MYHSKAAGRNSFHFYTQEMNIEANRRLQLE-EQLHNALDRNELRLLYQPVVDLKTR--KI 660 Query: 889 LWLISLKLWSC-EGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS--KGISI 945 + +L W E I + F L + + V + + ++ + + I Sbjct: 661 VGAEALLRWDSKELGAISPEEFIPVAEHTGLIVEIGKFVLDDALRTTSRWIKTFIPDFHI 720 Query: 946 SLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAIL----DHAESVQKLRLAGC 1001 ++ LS L++++ + + L R L L I ++ D E++ KL G Sbjct: 721 AINLSPRQFRDPHLIDNIESFVNSYGLEGRNLELEITEGVLMSQHADVEEAIAKLTQKGI 780 Query: 1002 RIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTI 1061 I + G + L++ + L +D ++ + D L+ A LG+K I Sbjct: 781 SISMDDFGTGYSSLSYLRSYPFNILKVDRSFINDISVDAADLELVNASIDMAHGLGLKVI 840 Query: 1062 AGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 A V L D+ G + P D L Sbjct: 841 AEGVETEEQTALLLRKNCDMAQGYYFSKPIPADEL 875 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 116/669 (17%), Positives = 223/669 (33%), Gaps = 107/669 (15%) Query: 105 AVLLRKLLPWYNP-LQNLADWLRLALGSAIVPPLLGGVLV---VLLTPGDDPLRAF-LIW 159 A+LL + + + LQN+ + I+ LLG ++ L PG + LI Sbjct: 14 ALLLAMGIVYDSLGLQNIHQRFLREGITGILVGLLGMAVMLTPWELIPGVFFDARWVLIS 73 Query: 160 VLSESIGALALVPLGLLFKPHYLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFI 219 + G + + ++ L + + +++ + + L W + + Sbjct: 74 LCGLYFGVIPTLIAVVMTVTLRLYQGGAGIYVGSAVIICSALIGLGWRAYIEKHNK---- 129 Query: 220 IVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLP 279 L W + + L+ + V +M P L ++ P +LI P Sbjct: 130 --ALTW-------WRLYFLGLSVQITVLCLMFFMPEHLRYKIIAAIA-----PTILIFYP 175 Query: 280 ANIMTMVMYAFRAERKHISESETH------------FRNAMEYSAIGMALVGTEGQWLQT 327 M + M R E + ++E E H R ++ + + EG++L Sbjct: 176 IGTMLLGMILSRQEERRLAERELHISRQILNRERGLLRGLIDALPDHIFIKDKEGKYLGC 235 Query: 328 NKALCQFLGYSQEELRGLTFQQLTWPE----DLNKDLQQVEKLISGEINTYSMEKRYYNR 383 NKA F G+ + +L G T Q + D + LQ + L+ ++ E+ Sbjct: 236 NKAFQSFTGHQEADLIGKTDQDFSESNHAITDKSDTLQVINNLLPINREAWTHEQ----- 290 Query: 384 NGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIW 443 +G + ++ DG P + DI E ++ E + + ++ A E + + Sbjct: 291 DGSPILLESQLAPFLDMDGEPQGIVGISRDITEKRKAE----ERILTLSQAVEQSPVSVV 346 Query: 444 EWELKPNIFSWDKRMFELYEIPPH--IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPF 501 LK + + + + + + P R + L + Sbjct: 347 ITNLKGEVEYVNSTFESVTGYSQAEVLGKDSSILKSGKTPPGRY---ADMWAKLVQGESW 403 Query: 502 KLEFRITVKDGIRHIR-ALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKER---- 556 + EF+ K+G A VL+ EGEV L + D+T+ K E + + Sbjct: 404 QGEFQNKKKNGEIFWEQAHIAPVLDAEGEVRHFLAVKQDVTKQKAQEEKILHQAHFDGLT 463 Query: 557 -------LHITLDSI---------GEAVVCIDMAMKITFMNP-------------VAEKM 587 L+++ AV+ +DM +N A+++ Sbjct: 464 ELPNRFLAMHRLETMMHEAKRNQHQIAVLFLDMDD-FKKVNDTLGHDMGDKILVEAAKRL 522 Query: 588 SGWTQE-EALGVPLLTVL-----HITFGDNG-PLMENIYSADTSRSAIEQDVVLHCRSGG 640 G ++ + +G H+ + P+ +N+ S I G Sbjct: 523 QGSVRDSDTIGRLGGDEFIVLINHLERPEQALPIAQNLLQQFRSSLTI---------DGR 573 Query: 641 SYDVHYSI-TPLSTLDGSNIGSVLVIQDVTESRKMLR-QLSYSASHDALTHLANRAS-FE 697 + SI L DG+ +L D + S+ + ANR E Sbjct: 574 DILLTMSIGIALYPGDGTTPSELLRNADSAMYHSKAAGRNSFHFYTQEMNIEANRRLQLE 633 Query: 698 KQLRILLQT 706 +QL L Sbjct: 634 EQLHNALDR 642 >UniRef50_A1RJS4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Shewanella RepID=A1RJS4_SHESW Length = 1028 Score = 642 bits (1657), Expect = 0.0, Method: Composition-based stats. Identities = 169/877 (19%), Positives = 335/877 (38%), Gaps = 30/877 (3%) Query: 239 FLTTVMMVSLMMAADPSLLATPRTYLMSHMP--------------WLPFLLILLPANIMT 284 F + + ++M P LLAT + L + WLPF+ + + +++ Sbjct: 127 FTLPISLSAIMGGFAPGLLATLISTLCVYFLVSNVEKSPLDMMLSWLPFVSLSVNGILIS 186 Query: 285 MVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRG 344 + RA + + + + + + + +G+++ N+ F+G S +E+ G Sbjct: 187 GLSGYLRASLRKSDLNHQLLESMVSQTTDAIFVKDLQGRYVVANQGAAAFVGKSMQEMIG 246 Query: 345 LTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTP 404 L P Q+ E ++ + T E ++G V + V + G Sbjct: 247 QNDDALFEPISAALIHQKDEAVLKEKKVTTHKEH-LQLKSGLAV-FQVTKGPVVDSKGEV 304 Query: 405 LYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI 464 DI +++ ++ ++ + A + GIG WEW+L + +W +++FE+Y + Sbjct: 305 RGLFGIARDITVQEQSAELIRKSEAGLRQAQQLSGIGSWEWDLVTDTHTWSEQVFEIYGL 364 Query: 465 PPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIR-HIRALANRV 523 P + + PE Q + L + P++ E I+ Sbjct: 365 SPKKALDIEQAQSLFPPESWQKLNHAVTQCLDTGEPYECEAEFYRAYTSPCWIKTRGQAT 424 Query: 524 LNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPV 583 +++G + +L G D+T+ + L + + + +L + + ++ ++P Sbjct: 425 RDEQGRIIKLQGTVQDITQARLLQQQIAAQTAQLQRVIQGSDQGYWDWNVTTGEVQISPR 484 Query: 584 AEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTS-RSAIEQDVVLHCRSGGSY 642 E + G+ E + D + + + +IE +V +SG Sbjct: 485 FEAILGYQTGEMQLKATNWAQFVCREDQREVKKVVLQHLRHLTPSIELEVRCKKKSGELC 544 Query: 643 DVHYSITPLS-TLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLR 701 V + G + D+T+ + +L A++DALT L NR + + Sbjct: 545 WVLCKGGIVEVDSKGRALMISGTQADITQLKNHEAELDKVANYDALTGLPNRRLLLDRFK 604 Query: 702 ILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLG 761 + VN + A+ F+DLD FKAVND GH GD LL + + ++R D LAR+G Sbjct: 605 QAISRVNRDGRLCAVCFLDLDGFKAVNDHYGHDVGDQLLVAIVDNLSKIMREQDTLARVG 664 Query: 762 GDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEV 821 GDEF L C+ + R++ A++ I + + R+ AS G++L ++N + Sbjct: 665 GDEFVALFDICSEAECTQVLERMLCAIDQTVLIGD-KNLRLSASIGVSLYPEDNVDPDIL 723 Query: 822 MSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASP 881 + AD A Y +K G+ +++P + L+E + + ++ + Sbjct: 724 LRHADHAMYMAKAAGKNCFQMFDPDVDRKLLAQRK-WLEELKSAFAKREFVLFYQPKVN- 781 Query: 882 RIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA-VA 939 + + +L W + ++ F L L V + Q + + Sbjct: 782 -LATGEVIGAEALIRWLHPQRGLLSPSVFLPDIEGSELEIPLGEWVINNAIAQIQRWYRS 840 Query: 940 SKGISISLPLSVAGLSSATLVNDLLEQLEN-SPLPPRLLHLIIPAEAILDHAE-SVQKLR 997 K I+IS+ +S L + + L + L N + + L L I A + ++ L+ Sbjct: 841 GKNINISVNVSARQLLADHFYDFLKQTLANFADVNTSSLELEILESAAIKDMTLAIGILK 900 Query: 998 L---AGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQ 1054 G L G L+ L +D ++ + D ++ + A Sbjct: 901 ECASLGVHFSLDDFGTGYSSLTYLRQLPVSALKIDQSFVRDMLVDQDDLRIVEGVIRLAS 960 Query: 1055 RLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQ 1091 + IA V L+ +G + G IA Sbjct: 961 VFNLAVIAEGVETIEHGRVLATLGCQMCQGYGIAVPM 997 >UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KA22_AZOSB Length = 1006 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 197/998 (19%), Positives = 352/998 (35%), Gaps = 97/998 (9%) Query: 178 KPHYLLRHRNP---RLLFESLLTLAITLTLSWLSMLYLPWPF-TFIIVLLMWSAVRLPRM 233 + L P R L +L + T S P F T + WS P Sbjct: 10 RHAPGLARSAPARVRALASALSLAFVLGTASAPVCALPPAVFQTHLDPGGDWSGKGHPGE 69 Query: 234 EAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAE 293 L + + A +L + + + LL + ++ RA Sbjct: 70 GGLL----GALAHVVGHDAAHALFSPVARNTLLGLAGTGALLF----GGVLLLRARVRAR 121 Query: 294 RKHISESETHFRNAMEYSAIGMALVGTEGQWLQT--NKALCQFLGYSQEELRGLTFQQLT 351 + + ++ + + EG++L N+ L E L G ++ Sbjct: 122 TRELEGVNRQLGATLDAIPDLLFEMDGEGRYLAVHANREAQ--LQRPVEALLGRRVDEVL 179 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRY-YNRNGDVVWALLAVSLVRHTDGTPLYFIAQ 410 + L + +S ++ + W L+V+ + DG P +FI Sbjct: 180 PA---PAAQTCLAALAEAGRHGWSSGQQIEITIDNQPQWFELSVAR-KADDGGPAHFIVL 235 Query: 411 IEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKP 470 DI +R E + Q + R+ I + ++ ++ + Sbjct: 236 SRDITARRRAE-ASVQRLSRLYATLSQCNQAIVRCASQDDLLRQICHDAVVFGEMKMVWI 294 Query: 471 NWQVWYE-CVLPE----DRQHAEKVIRDSLQSRSPFK-----LEFRI------------- 507 + V P D IR + S SPF R+ Sbjct: 295 GLLDERDGMVHPAAAYGDGTEYLDGIRIAFDSASPFGRGPSGSALRLDKPVWCQDFANDP 354 Query: 508 ----TVKDGIRH-IRALANRVLNKEGEVERLLGI-------------------NMDMT-- 541 + G RH RA A L++ G+V +L + MD+ Sbjct: 355 ATSAWHERGARHGYRASAALPLHRGGKVFGVLNLYAGECHAFDEAAQRLLVEMAMDIDFA 414 Query: 542 --------EVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMK-ITFMNPVAEKMSGWTQ 592 E +L A+ +E+ +SI + + +D + ++++P ++SG+ Sbjct: 415 LDRFEQDAERARLAAAIVDSEEKYRELTESINDVIWTVDPETRCFSYVSPAMRRLSGYAP 474 Query: 593 EEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIE------QDVVLHCRSGGSYDVHY 646 E + P+ +L + ++ A+ + ++V L R GG+ Sbjct: 475 HELIDAPIERLLKPEYVAEMRERMALHLAEFHVGKRKSEDYSVEEVELGRRDGGTVWAEV 534 Query: 647 SITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQT 706 T + V +D++E R ++ A +D LT L NR+ + + R Sbjct: 535 VTTLGLNRRSGRVEFRAVARDISERRAAEAEIQRLAHYDQLTGLPNRSLVKDRFRYAASL 594 Query: 707 VNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFG 766 + A++F DLD FK +ND+ GH GD LL E+A + S+LR D + RLGGDEF Sbjct: 595 TQRRRGQLAVMFFDLDHFKNINDTLGHDFGDRLLVEVARRLESVLRGGDTVCRLGGDEFV 654 Query: 767 LLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQAD 826 LLPD + E A +A +++ AV + + + V S GI + D+ + AD Sbjct: 655 FLLPDTDAEGAARVAAKLLEAVAQ-PLVLDHQELTVTPSIGIAMYPDDGTDFDTLSRNAD 713 Query: 827 IACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEA 886 A Y +K GR + A S R + + + Q + S + + Sbjct: 714 AAMYQAKREGRNGFRFFTEAMQAR-STRTLLLANALRHALDRGQFSLHYQPQVS--LADG 770 Query: 887 RNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS--KGI 943 R + +L W E + F L + V E Q+ + + + Sbjct: 771 RVVGAEALLRWTHPEFGPVSPGEFVPIAESNGLIAQIGEWVLREAVAQSRRWLDEGLPPL 830 Query: 944 SISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLA 999 +++ LS A + L + + +E + LPP + L + +D +S + L Sbjct: 831 VMAVNLSAAQFRNPNLPELVSQVIEEAGLPPHQVELELTEAVAMDDPQSAVRVMDALFAR 890 Query: 1000 GCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMK 1059 G R+ + G LK L +D ++ + D+ +++ I A LGM Sbjct: 891 GIRMSIDDFGTGYSSLGYLKRFKVGKLKIDQSFVRDIGDDPDDKAIVSAIIHLAGSLGML 950 Query: 1060 TIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 T+A V +D L G D + G + P + V Sbjct: 951 TVAEGVETLDQLDFLRQQGCDTVQGYYFSRPLPAEAFV 988 >UniRef50_A4G3M6 Putative two-component response regulator n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G3M6_HERAR Length = 818 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 146/696 (20%), Positives = 275/696 (39%), Gaps = 17/696 (2%) Query: 410 QIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIK 469 +E + +R E + E + + + + + + + Sbjct: 120 HVEQRDARRRIETELLESNLMFRTFMENLPGAAFIKDQDGRYLYCNHGLDKAFNVEKGCS 179 Query: 470 PNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGE 529 ++ E V E ++ L++ + + +++ G + + ++ + + Sbjct: 180 IG-KLDTELVPLEVAYKLREMEARVLKAGTALQELEVMSMPSGASYWLSTKFPLVGENSD 238 Query: 530 VERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSG 589 + + GI +D+TE ++ + L + ++ I V M + ++N E ++G Sbjct: 239 SQHVGGIAIDITERMKVEQDLLLRTRAIEACVNPI-VIVDTATPGMPLIYVNGAFETITG 297 Query: 590 WTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSIT 649 ++ EEA+G + + + P + + +A + + + + G + I Sbjct: 298 YSSEEAIGRNCKFLQGMDT--DQPELGKLRAAIREQRPASVLLRNYHKDGSMFLNELYIA 355 Query: 650 PLSTLDGSNIG-SVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVN 708 P+S G +G V V+ DVT+ ++ L + A++D LT LANR ++ + L Sbjct: 356 PVSDTSGGAVGHFVGVLYDVTQIKRYQEDLEHQANYDTLTGLANRNLLNERTQQALLQAR 415 Query: 709 STHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLL 768 +LVFIDLD FK VNDS GH AGD L+ + S + + +R D +AR+GGDEF LL Sbjct: 416 RHDHFLSLVFIDLDNFKLVNDSMGHGAGDELIANVGSRLQTCVRDGDTVARIGGDEFVLL 475 Query: 769 LPDCNVESA-RFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADI 827 L + +V + + RI + + G+ V S G+ ++ + +++ AD Sbjct: 476 LTNQSVSDSNAGVMQRIQAELIK-PMWIRGQEIVVTCSMGVARFPEDGEDSESLLANADT 534 Query: 828 ACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEAR 887 A Y +K+ GR Y + A ER ++ D W +K ++L ++ R + Sbjct: 535 AMYRAKSSGRNNFQFYTKEMNATSGERLSLESD-LWHALKNDELFLVYQPQIDLR--DGT 591 Query: 888 NLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQ--AAKAVASKGIS 944 + + +L W +I F L + V + + I Sbjct: 592 VIGMEALIRWQHPKRGLIAPMDFIPMAECNGLIIPIGIWVLETACRHNLQLQKEGLPPIR 651 Query: 945 ISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAG 1000 +++ LS LS V + +E L P L L + ++ + E ++ L G Sbjct: 652 VAINLSARQLSDRNFVESVQSVIEAIGLDPHYLELEVTESMVMHNVEDVVVTLNDLNKMG 711 Query: 1001 CRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKT 1060 ++ L G LK D L +D N + D ++ I A L +K Sbjct: 712 IQLSLDDFGTGFSSLAYLKRFPIDRLKIDQSFIFNCDSDPGDAIIAQTIIALAHGLKIKV 771 Query: 1061 IAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 IA V + L G D G I+ D L Sbjct: 772 IAEGVEKSEHLSFLKKNGCDEGQGYFISRPLTFDDL 807 Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 5/147 (3%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTE--GQ-WLQTNKALCQFLGYSQEELRGLTFQ 348 ER + + A+E + +V T G + N A GYS EE G + Sbjct: 250 TERMKVEQDLLLRTRAIEACVNPIVIVDTATPGMPLIYVNGAFETITGYSSEEAIGRNCK 309 Query: 349 QLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPL-YF 407 L + +L ++ I E S+ R Y+++G + L ++ V T G + +F Sbjct: 310 FLQGMDTDQPELGKLRAAIR-EQRPASVLLRNYHKDGSMFLNELYIAPVSDTSGGAVGHF 368 Query: 408 IAQIEDINELKRTEQVNQQLMERITLA 434 + + D+ ++KR ++ + TL Sbjct: 369 VGVLYDVTQIKRYQEDLEHQANYDTLT 395 Score = 63.0 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 43/273 (15%), Positives = 87/273 (31%), Gaps = 12/273 (4%) Query: 289 AFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQ 348 A R + ES FR ME + +G++L N L + + G Sbjct: 126 ARRRIETELLESNLMFRTFMENLPGAAFIKDQDGRYLYCNHGLDKAFNVEKGCSIGKLDT 185 Query: 349 QLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFI 408 +L E K + +++ +E +G W L + + + Sbjct: 186 ELVPLEVAYKLREMEARVLKAGTALQELEV-MSMPSGASYW-LSTKFPLVGENSDSQHVG 243 Query: 409 AQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNI--FSWDKRMFELYEIPP 466 DI E + EQ L+ R + P + + + Sbjct: 244 GIAIDITERMKVEQ---DLLLRTRAIEACVNPIVIVDTATPGMPLIYVNGAFETITGYSS 300 Query: 467 HIKPNWQ-VWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLN 525 + + + + + +R +++ + P + R KDG + L ++ Sbjct: 301 EEAIGRNCKFLQGMDTDQPE--LGKLRAAIREQRPASVLLRNYHKDGSMFLNELYIAPVS 358 Query: 526 KE--GEVERLLGINMDMTEVKQLNEALFQEKER 556 G V +G+ D+T++K+ E L + Sbjct: 359 DTSGGAVGHFVGVLYDVTQIKRYQEDLEHQANY 391 >UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMB6_9PROT Length = 922 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 133/628 (21%), Positives = 252/628 (40%), Gaps = 37/628 (5%) Query: 487 AEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQL 546 A + R + ++ R + + + R+ + E +N ++ E + Sbjct: 295 AWVLARGVMDRGLAEEMRIRELNEQLEQRVLERTARLESANQE------LNREIAERSRA 348 Query: 547 NEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHI 606 L + E ++ D I +N + +G++ E+ +G + Sbjct: 349 EAELR-----IAAIAFDSQEGMMVTDAHGVILRVNRAFVEETGYSAEDVVGRKRTML--T 401 Query: 607 TFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQ 666 + ++ L + ++ A + +V ++G Y V +I+ + G V Sbjct: 402 SGREDAALDDAMWETVQRCGAWQGEVWDRRKNGEVYPVWLTISAVKGQGGLVTHYVATHI 461 Query: 667 DVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKA 726 D+T+ + + QL A +D LT L NR +L +L + + A++FIDLD FKA Sbjct: 462 DITQRKAVEDQLHKLAFYDPLTQLPNRRLLLDRLGHVLAGSTRSRNQGAIMFIDLDNFKA 521 Query: 727 VNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE-----SARFIA 781 +ND+ GH GD LL E+A + S +R D +ARLGGDEF +++ D + +A Sbjct: 522 LNDTQGHDVGDRLLAEVAQRLKSSVRQCDTVARLGGDEFVVMVQDLAADSMVVAQVEAVA 581 Query: 782 TRIISAVNDYHFIWEGRV--------HRVGASAGITLIDDNNHQAAEVMSQADIACYASK 833 +I++A++ + + + AS GITL ++ E++ QAD+A Y +K Sbjct: 582 GKILAALDCPYRLVFDAELGRRNALNYHCTASIGITLFGAHSTNVDELLKQADLAMYQAK 641 Query: 834 NGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLIS 893 + GR + ++P+ AA + R A+ D + ++ Q + R + Sbjct: 642 DSGRNAIRFFDPEMQAAITSRVALEADLR-EAVEAGQFQLYYQPQVVG--ESHRLTGAEA 698 Query: 894 LKLWSC-EGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKG---ISISLPL 949 L W ++ F + L L + V Q A + +++++ + Sbjct: 699 LLRWHHSRRGMVPPSEFIPLAEETGLILPLGQWVLETACAQLATWASQPEMAQLTVAVNV 758 Query: 950 SVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQK----LRLAGCRIVL 1005 S + V+ +L L ++ P+ L L + ++ + E + L+ G L Sbjct: 759 SAHQIRQTDFVDQVLAVLADAGANPQRLKLELTESLLVSNVEDIIAKMTLLKSRGVGFSL 818 Query: 1006 SQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPV 1065 G + LK D L +D V + D + +I A+ LG+ IA V Sbjct: 819 DDFGTGYSSLSYLKRLPLDQLKIDQSFVNEVLTDANDAAIAKMIVALAESLGLAVIAEGV 878 Query: 1066 VLPLVMDTLSGIGVDLIYGEVIADAQPL 1093 + L+ G G + + PL Sbjct: 879 ETEEQRNFLAESGCHAYQGYLFSKPLPL 906 Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 41/227 (18%), Positives = 76/227 (33%), Gaps = 7/227 (3%) Query: 223 LMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLA---TPRTYLMSHMPWLPFLLILLP 279 L+ +A R ++ +++ ++ + L ++ Sbjct: 269 LLAAANRNLVQALAILLAVWLLVFGGAWVLARGVMDRGLAEEMRIRELNEQLEQRVLERT 328 Query: 280 ANIMTMVMYAFRAERKHIS-ESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYS 338 A + + R + E+E S GM + G L+ N+A + GYS Sbjct: 329 ARLESANQELNREIAERSRAEAELRIAAIAFDSQEGMMVTDAHGVILRVNRAFVEETGYS 388 Query: 339 QEELRGLTFQQLTW-PEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLV 397 E++ G LT ED D E + + E +NG+V L +S V Sbjct: 389 AEDVVGRKRTMLTSGREDAALDDAMWETV--QRCGAWQGEVWDRRKNGEVYPVWLTISAV 446 Query: 398 RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWE 444 + G +++A DI + K E +L L + + Sbjct: 447 KGQGGLVTHYVATHIDITQRKAVEDQLHKLAFYDPLTQLPNRRLLLD 493 >UniRef50_B1Y791 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y791_LEPCP Length = 1066 Score = 641 bits (1655), Expect = 0.0, Method: Composition-based stats. Identities = 186/889 (20%), Positives = 335/889 (37%), Gaps = 65/889 (7%) Query: 261 RTYLMSHMPWLPF----LLILLPANIMTMVMYAFRAERK---HISESETHFRNAMEYSAI 313 + H WL LL L +M ++M R + ++ SE H R M Sbjct: 168 SQVRIDHQRWLTLFTLGLLSALAITLMGVLMRLSRQRNESDAALAASEAHLRTFMRAMPD 227 Query: 314 GMALVGTEGQWLQT-NKA------LCQFLGYSQEELRGLTFQQLTWPEDL----NKDLQQ 362 L +G++L A + + LG ++ G +L ++ Q+ Sbjct: 228 VSFLFDRDGRYLDVFGPAEKLAEPVERMLGRRIADVHGERHVELFMSVIRLALETREPQR 287 Query: 363 VEKLISGEINTYSMEKRY--YNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRT 420 E + + T E R VVW +S R + I+++ + Sbjct: 288 CEFALEVQQGTRWFEARVCAVPDREQVVWVSWDISERRAAELRVTELTRLYSFISQVNQA 347 Query: 421 ---EQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYE 477 + +L +RI + G W ++ + + R+ + + Sbjct: 348 FVWTRSEAELFDRICNVAISHGHLRLAWVVQRDGAASAPRVA----VQRGDSTLVHLCAA 403 Query: 478 CVLPEDRQHAEKVIRDSLQSRSPFK--------------LEFRITVKDGIRHIRALANRV 523 + P HA V + L ++ + + + + L Sbjct: 404 SLPPATHSHAMAVSQSLLTGTVQWRPGSVKPAGEAPLDLVSVPVRNLNQVVAAVVLVGNK 463 Query: 524 LNKEGEVER--LLGINMDMTEVKQLNEALFQEKERLHIT------LDSIGEAVVCIDMAM 575 L+ E ++ + + DM+ Q +E L T L+S + V+ D+ Sbjct: 464 LDPEDREQQALIAELGSDMSHALAQFTREAQWQESLARTRLHAAALESTQDGVMVTDLRP 523 Query: 576 KITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLH 635 +I +N +++G+++ EA+G+ + + +++ + + +V Sbjct: 524 RIVSVNRAFTEITGYSETEAVGMSPRLLQ--SGRHEPAFFTRLWNQLLTHGRWQGEVQNR 581 Query: 636 CRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRAS 695 ++G Y S++ + V V D+T ++ ++L + A D LT L NR Sbjct: 582 RKNGELYTQWMSVSTVRDEHDQPTHYVSVFTDITPQKEAEQRLQHLAHFDPLTQLPNRLM 641 Query: 696 FEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSD 755 +L + + +R A++FIDLD FK VNDS GH+AGD LLR +A + + R D Sbjct: 642 VLSRLEHAIASAARAERRVAVLFIDLDNFKTVNDSLGHSAGDDLLRAVADRLGTRTRRED 701 Query: 756 VLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDN 814 L RLGGDEF L+L + A +A +I + + F G+ V AS GI+L D+ Sbjct: 702 TLGRLGGDEFILMLEHLREPQDAAQVAQELIGLL-ETPFRVAGQEVYVQASIGISLYPDD 760 Query: 815 NHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMML 874 + E++ AD A Y +K GRG Y A R A+ R ++ + ++ Sbjct: 761 GLEVGELVRDADAAMYQAKRAGRGVYRFYTESLTTAAQSRLALDT-RLRRALENKEFVLW 819 Query: 875 AHGVASPRIPEARNLWLISLKLWSCEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQ 933 + R+ + + L +L + G I F + L V E +Q Sbjct: 820 YQPLY--RLADRCLIGLEALVRLNQPGLPPIGPAEFIPLLEETGQITTLGAWVTQEACRQ 877 Query: 934 AAKAVASKGI---SISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA 990 +A +G+ I++ LS + + E LE S LP L L + +++ Sbjct: 878 -GRAWLDEGLDFGRIAINLSPQEIRRGQTDERVREALERSGLPAERLELELTESGLMEQG 936 Query: 991 ES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLI 1046 E + +LR G R+ + G LK L +D ++ + D L+ Sbjct: 937 ERAEAFLHRLRALGVRLAIDDFGTGYSSLAYLKRFPVSKLKIDRSFVRDLPADANDAQLV 996 Query: 1047 TIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDL 1095 + + LG+ +A V D L +G D G + +P D Sbjct: 997 QTMVSMGRNLGISVLAEGVETEAQFDYLRSLGCDAAQGYFFSPPRPADE 1045 Score = 47.6 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 42/241 (17%), Positives = 81/241 (33%), Gaps = 30/241 (12%) Query: 494 SLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVK-QLNEALFQ 552 +L+ + + RI + R + +L+ L+G+ M ++ + + + AL Sbjct: 159 ALERQLRLHSQVRIDHQ---RWLTLFTLGLLSA--LAITLMGVLMRLSRQRNESDAALAA 213 Query: 553 EKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNG 612 + L + ++ + D + + AEK++ E LG + V + Sbjct: 214 SEAHLRTFMRAMPDVSFLFDRDGRYLDVFGPAEKLAE-PVERMLGRRIADVHGERHVE-- 270 Query: 613 PLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESR 672 M I A +R + L + G + + + + V V D++E R Sbjct: 271 LFMSVIRLALETREPQRCEFALEVQQG-TRWFEARVCAVPDRE----QVVWVSWDISERR 325 Query: 673 KMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAG 732 + +T L SF Q+ S + DR V S G Sbjct: 326 AAELR---------VTELTRLYSFISQVNQAFVWTRSEAELF-------DRICNVAISHG 369 Query: 733 H 733 H Sbjct: 370 H 370 >UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0ACK6_ALHEH Length = 857 Score = 641 bits (1655), Expect = 0.0, Method: Composition-based stats. Identities = 168/835 (20%), Positives = 307/835 (36%), Gaps = 55/835 (6%) Query: 304 FRNAMEYSAIGMALVGTEG---QWLQTNKALCQFLGYSQEELRG--LTFQQLTWPEDLNK 358 +E S + +G + + + + + LGY + ++Q P+D + Sbjct: 21 LHRVLEASPAVTYALTRDGQSLRPVYISAHIEELLGYPVADWMADPQFWRQCLHPDDRER 80 Query: 359 DLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELK 418 L Q + + E R +R+G W + L+ DG P + +DI Sbjct: 81 VLAQSARHL--PEGLVDHEYRVRHRDGSYRWVHDRLRLMPARDGRPAMAVGVWQDITHRA 138 Query: 419 RTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYEC 478 R +++ + L L G + ++ + D R L E+P H Sbjct: 139 RADRLLRTLSH---LTARVTGDDFFRTLVRHLAEALDMRYVLLGELPGHPPTRVHTRALY 195 Query: 479 VLPEDRQHAEKVIR----DSLQSRSPFKLEFRITVKDGIRHIRA-------LANRVLNKE 527 R + + + S P + + + + Sbjct: 196 ADGAIRPNVTYPLAGTPCARVLSDEPCHYANDVCRDFPEDELLREMAVESYFGVPIRRAD 255 Query: 528 GEVERLLGINMD---------------MTEVKQLNEALFQEKERLHIT---LDSIGEAVV 569 G + LL + D A Q +E+L + + +A++ Sbjct: 256 GTITGLLALMHDQPREISATERAVIALFAARAGTELARHQAEEQLQLIDQVFEGSRDAII 315 Query: 570 CIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGP-LMENIYSADTSRSAI 628 D +I +NP E +SG+ +EE +G + G GP ++ A SR Sbjct: 316 ITDAQTRILQVNPAFEAISGYREEELVGRTPRL---LQSGHQGPRFYREMWEALKSRGHW 372 Query: 629 EQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALT 688 + ++ G +Y S++ ++ + + + D+T + + + Y A +D LT Sbjct: 373 QGELWNRRADGETYPSLLSVSAVTNDNDEVTHYIGIASDITSHKAAEQHIDYLAHYDTLT 432 Query: 689 HLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLML 748 L NR E++L +L+ + AL F+DLDRFK +ND+ GH +GD LL E+A + Sbjct: 433 GLGNRRLLEEELERMLRNA-RGGRPFALFFLDLDRFKNINDTLGHESGDRLLEEVADRLR 491 Query: 749 SMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGI 808 + L R+GGDEF +L P + IA +++ ++ + I E R V S G+ Sbjct: 492 DLAGPQATLCRIGGDEFAILAPGLSHRQTAGIARQLVEGISRPYEITE-RPLVVTCSVGV 550 Query: 809 TLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKE 868 + + + ++S AD A + K G +EP AA +ER + D + + Sbjct: 551 AVHPRDGTRREALISAADTALHYVKAHGSNHYQFHEPGMTAAAAERLHLENDLR-EALLR 609 Query: 869 NQLMMLAHGVASPRIPEARNLWLISLKLWS-CEGEIIDEQTFRRSFSDPALSHALDRRVF 927 + + V +L W E +I F + L + V Sbjct: 610 GEFELYYQPVLD--TERLTVCGAEALLRWHHPEAGLIPPDRFIPLAEETGLIRPIGTWVL 667 Query: 928 HEFFQQAAKA--VASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEA 985 E QAA+ + G+++S+ +S L + + LE L P L L I Sbjct: 668 REACAQAARWRRLGLTGMTVSVNVSGEQFWRDELPQAVRQALEAQALAPDALVLEITESV 727 Query: 986 IL----DHAESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLM 1041 ++ + +++L+ G + L G + LK D L +D ++ + Sbjct: 728 LMHGSANTETRLRELKAMGVGLSLDDFGTGYSSLSYLKRFPIDTLKIDKSFVRDMVRDEH 787 Query: 1042 DEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 D L + LG++ +A V + L D + G + P L Sbjct: 788 DRTLAQTVIAMGHGLGLQVVAEGVESAEHLPLLRRARCDRVQGYHFSRPLPARAL 842 Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 55/153 (35%), Gaps = 1/153 (0%) Query: 282 IMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEE 341 + R E E S + + + + LQ N A GY +EE Sbjct: 281 ALFAARAGTELARHQAEEQLQLIDQVFEGSRDAIIITDAQTRILQVNPAFEAISGYREEE 340 Query: 342 LRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTD 401 L G T + L + +++ + + + + E +G+ +LL+VS V + + Sbjct: 341 LVGRTPRLLQSGHQGPRFYREMWEALKSRGH-WQGELWNRRADGETYPSLLSVSAVTNDN 399 Query: 402 GTPLYFIAQIEDINELKRTEQVNQQLMERITLA 434 ++I DI K EQ L TL Sbjct: 400 DEVTHYIGIASDITSHKAAEQHIDYLAHYDTLT 432 >UniRef50_B7K7G5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Chroococcales RepID=B7K7G5_CYAP7 Length = 706 Score = 641 bits (1655), Expect = 0.0, Method: Composition-based stats. Identities = 165/717 (23%), Positives = 308/717 (42%), Gaps = 43/717 (5%) Query: 405 LYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKP-NIFSWDKRMFELYE 463 YF++ ED L++ E +Q ++ ++ +W L +K ++Y Sbjct: 15 QYFLSISEDTISLQKIENGIKQSQAQLKSILDSLKDIVWSVSLPSFQYIYLNKTAEDIYG 74 Query: 464 IP-PHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD-GIRHIRALAN 521 I N +W E V PEDR + +++ R+ QS +E+RI D IR + Sbjct: 75 ISISEFFKNSNLWLEMVHPEDRSNIKQLARNWDQSDINKDIEYRIIRPDGQIRWLHNRIQ 134 Query: 522 RVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMN 581 + N++ + RL GI D+TE K+ AL Q + RL + +I + ++ +D + F+N Sbjct: 135 VIYNEQKKPVRLDGIITDITERKKTEIALQQSEHRLSQIITTISDGLIVVDYEGTVKFVN 194 Query: 582 PVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGS 641 EK+ G T++E + L GD ++ + +G Sbjct: 195 AATEKLFGRTKQELIDQKLGIPF--VDGD------------------RTEIYIRHSNGHL 234 Query: 642 YDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLR 701 I+ ++ + ++ ++D+T+ + + QL Y A+HD LT L NR ++L+ Sbjct: 235 IIAEIRISEITWKQEN--AYLISLRDITDRKYITDQLQYHATHDPLTDLFNRNFLLEKLQ 292 Query: 702 ILLQTVN-STHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARL 760 LL+ + + A++F+DLD FK VNDS GH AGD LL + + + L + LAR Sbjct: 293 NLLEKNKNQSGKSFAILFLDLDDFKVVNDSLGHLAGDQLLIMITKRLQNSLGQNHTLARF 352 Query: 761 GGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAA 819 GGDEF +LL + + A A +I S + Y + G+ + S GI L + Sbjct: 353 GGDEFTILLENIKETQDAIIAAQKIHSNL-TYPYNLNGQQIFINTSIGIALSSPDYTHPY 411 Query: 820 EVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVA 879 E++ ADIA Y SK G+G T++ Q +R M ++ + + I++ + + + Sbjct: 412 EILRDADIAMYQSKKQGKGACTLFNQQMHEQAVKRLQMEIELR-QAIEQQEFIAHYQPIF 470 Query: 880 SPRIPEARNLWLISLKLWSC-EGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV 938 S + + + +L W + +I F + L + + + E Q + Sbjct: 471 S--LTTGKLIGFEALIRWQHSQKGLISPAEFIPIAEETGLIVPMGKWILLEACTQLKQWQ 528 Query: 939 ASKG----ISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES-- 992 + IS+ LS L LV ++ + L ++ + P+ L + I ++++ ++ Sbjct: 529 EQYDHEHILQISVNLSSKQLRDPYLVQEIDKILTHTEINPQNLKIEITESLLMENFDTAM 588 Query: 993 --VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQ 1050 + +L+ ++ L G + L D L +D + + +I I Sbjct: 589 NILLQLQERNTQLCLDDFGTGYSSLSYLHRFPVDILKIDRSFVMQMHSGNNNLEIIRTII 648 Query: 1051 GHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQP---LDLLVNSSYFAI 1104 A L M+ IA + + L + + G + + P + L+ S ++ Sbjct: 649 TLAHSLNMRVIAEGIETESQLSQLKSLNCEQGQGYLFSKPVPQEVAESLIKESLYSA 705 Score = 87.6 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 43/263 (16%), Positives = 91/263 (34%), Gaps = 24/263 (9%) Query: 297 ISESETHFRNAMEYSAIGMALVG-TEGQWLQTNKALCQFLGYSQEELRGLT--FQQLTWP 353 I +S+ ++ ++ + V Q++ NK G S E + + ++ P Sbjct: 34 IKQSQAQLKSILDSLKDIVWSVSLPSFQYIYLNKTAEDIYGISISEFFKNSNLWLEMVHP 93 Query: 354 EDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIED 413 ED + Q +IN +E R +G + W + ++ + P+ I D Sbjct: 94 EDRSNIKQLARNWDQSDINK-DIEYRIIRPDGQIRWLHNRIQVIYNEQKKPVRLDGIITD 152 Query: 414 INELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQ 473 I E K+TE QQ R++ G+ + + + + +L+ + + Sbjct: 153 ITERKKTEIALQQSEHRLSQIITTISDGLIVVDYEGTVKFVNAATEKLFGRTKQELIDQK 212 Query: 474 VWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERL 533 + V + + E I +G I + + + E L Sbjct: 213 LGIPFVDGD-------------------RTEIYIRHSNGHLIIAEIRISEITWKQENAYL 253 Query: 534 LGINMDMTEVKQLNEALFQEKER 556 + + D+T+ K + + L Sbjct: 254 ISL-RDITDRKYITDQLQYHATH 275 Score = 50.3 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 23/148 (15%), Positives = 47/148 (31%), Gaps = 21/148 (14%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + + + +SE + + G+ +V EG N A + G +++EL Sbjct: 153 ITERKKTEIALQQSEHRLSQIITTISDGLIVVDYEGTVKFVNAATEKLFGRTKQELI--- 209 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 D + V + E + NG ++ A + +S + Sbjct: 210 --------DQKLGIPFV--------DGDRTEIYIRHSNGHLIIAEIRISEITWKQENA-- 251 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLA 434 ++ + DI + K Q L Sbjct: 252 YLISLRDITDRKYITDQLQYHATHDPLT 279 >UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4R7_HERAR Length = 859 Score = 641 bits (1653), Expect = 0.0, Method: Composition-based stats. Identities = 130/572 (22%), Positives = 230/572 (40%), Gaps = 13/572 (2%) Query: 532 RLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWT 591 +LL + + +L ++ A++ D+ I + N +G+ Sbjct: 284 QLLETATHFLAIAIERKQSEVFMRKLSQAVEQSSNAIIITDLNGTIEYANTTFSTNTGYA 343 Query: 592 QEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPL 651 + +G +H + + ++++ + + + + +G ++P+ Sbjct: 344 LHDIIGKKPN--MHKSGKTSRATYADMWAHLGRGESWQGEFINRRHNGEERIDLVRVSPV 401 Query: 652 STLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTH 711 DG + + +D+T + ++ A D LT L NRA +++ + L+ Sbjct: 402 READGRITHYLAIEEDITNQKNAQARIESLAHFDVLTGLPNRALLDERAQRALRLAEEDQ 461 Query: 712 QRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD 771 A++F+DLD FK +ND+ GH GD LL ELA + ++LR D L+RLGGDEF LLLP Sbjct: 462 ATLAVMFLDLDHFKNINDTLGHNLGDTLLVELAQRLRAVLRRDDTLSRLGGDEFVLLLPG 521 Query: 772 CNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYA 831 N ESA+ IA ++ A+N+ + V AS GI + + + AD+A Y Sbjct: 522 ANRESAKKIAQELMRAINE-PYRIGSHELNVMASIGIAVYPADGMDFETLCKNADVAMYR 580 Query: 832 SKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWL 891 +K GR + + A +S R L+ + I + QL + S + Sbjct: 581 AKQEGRNAYRSFTQEMQA-YSTRYLQVLNALRQAIAQEQLHVHYQPQISLI--SGDVIGA 637 Query: 892 ISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA--VASKGISISLP 948 +L W E I F + L + V QA K + + I++ Sbjct: 638 EALLRWHHPELGNISPAEFIPIAEESGLILQIGEWVLRVAVAQAKKWHQLGLDKLIIAVN 697 Query: 949 LSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIV 1004 LS A L N +++ L+ PP+ L L + + + + L G R+ Sbjct: 698 LSAVQFRHAGLPNLVMQILKEEDFPPQYLELELTEGVAMHDPQGAIAMMNSLHERGVRMS 757 Query: 1005 LSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGP 1064 + G + LK A L +D ++ + D+ +++ I G A+ LG++TIA Sbjct: 758 IDDFGTGYSSLSYLKQFKAYKLKIDQSFVRDISTDAEDKAIVSAIIGMAKNLGLQTIAEG 817 Query: 1065 VVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 V L G G + P Sbjct: 818 VETAEQQAFLREEGCHEAQGYHYSKPLPAADF 849 Score = 71.8 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 58/188 (30%), Gaps = 13/188 (6%) Query: 289 AFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQ 348 A ERK A+E S+ + + G N GY+ ++ G Sbjct: 294 AIAIERKQSEVFMRKLSQAVEQSSNAIIITDLNGTIEYANTTFSTNTGYALHDIIGKKPN 353 Query: 349 QLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFI 408 + + + G ++ E NG+ L+ VS VR DG +++ Sbjct: 354 MHKSGKTSRATYADMWAHL-GRGESWQGEFINRRHNGEERIDLVRVSPVREADGRITHYL 412 Query: 409 AQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHI 468 A EDI K + + L L PN D+R + Sbjct: 413 AIEEDITNQKNAQARIESLAHFDVLTGL------------PNRALLDERAQRALRLAEED 460 Query: 469 KPNWQVWY 476 + V + Sbjct: 461 QATLAVMF 468 >UniRef50_Q2BPN3 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) withPAS/PAC sensor n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPN3_9GAMM Length = 878 Score = 641 bits (1653), Expect = 0.0, Method: Composition-based stats. Identities = 143/697 (20%), Positives = 279/697 (40%), Gaps = 26/697 (3%) Query: 417 LKRTEQVNQQLMERITLANEAGGIGIWEWELKPNI----FSWDKRMFELYEIPPHIK-PN 471 +++ Q + +A ++++ L + + + I + Sbjct: 184 RFSSQENLQHKERLLENITQAMPGVVYQYHLDDELKQSFTYIGPGIETISGITAEAAIED 243 Query: 472 WQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD-GIRHIRALANRVLNKEGEV 530 + ++E V P+DR I + + + EFR+ K+ + +R A E Sbjct: 244 FSEFWEQVHPDDRSGLWASIVHTGKHGLAWSHEFRVFHKNGQMHWVRGSALPSKLGSQEG 303 Query: 531 ERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGW 590 GI +D+T K A ++ I S E ++ D +I +N +SG+ Sbjct: 304 LLWNGIILDITPEK----ASIEQLRLAGIAFSSTNEGIMITDKRNRIIDINRAYMNISGY 359 Query: 591 TQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITP 650 ++E +G + + + ++I+ + + ++ ++G +I Sbjct: 360 GRDELIGKNPSILR--SEHHSNEFYQSIWKSLEEERHWQGEIWNRLKNGEVVPHWVNINA 417 Query: 651 LSTLD-GSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNS 709 + + + V VI D++ + +LS+ A HDALT+L NR F +L L Sbjct: 418 VHDPNTDALTHFVSVIADISNIKASEEKLSHLAHHDALTNLPNRLLFSARLDHALTH-RE 476 Query: 710 THQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLL 769 ++ + +DLDRFK +NDS GH GD LL ++ + +L D LAR+GGDEF +L+ Sbjct: 477 ASEKIVMFHLDLDRFKHINDSLGHKYGDQLLLQVTERLKGVLSDKDTLARVGGDEFAILV 536 Query: 770 PDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIA 828 + +V A IA R++ A+ F +G+ + AS G+ L D+ + ADIA Sbjct: 537 EELEHVSDAESIADRLVEAMEQ-PFTLDGKDYFTTASIGLALAPDHGDDIDTLTKHADIA 595 Query: 829 CYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARN 888 +K+ GR ++P+ + E + + + + + ENQ + Sbjct: 596 LNQAKDSGRNNFAFFQPELSETVQEWIKLEPELR-KALAENQFQLHYQPQVD--STGTAI 652 Query: 889 LWLISLKLWSCEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK--GISI 945 + +L W II F + L + + V + +Q + + G + Sbjct: 653 VGAEALIRWHHPEMGIIPPNQFLPIAEEIGLMNKIGEWVMNTALEQLSFWRSRGLIGFRL 712 Query: 946 SLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESV----QKLRLAGC 1001 ++ L+ ++ L +++ LE+ +P +L L I +++H E ++LR G Sbjct: 713 AINLAGDQITKQNLPMVVMQALEHFQIPAEMLELEILETFLMEHEEEATSTFKQLRELGV 772 Query: 1002 RIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTI 1061 + L G + LK + +D L ++ + DE + + A L + Sbjct: 773 HLSLDDFGTGYSALSYLKKLPITKVKIDQSLVRDIPEDPNDEAIAKAVILLAHTLDLTVC 832 Query: 1062 AGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 A V + L D + G + + + N Sbjct: 833 AEGVETRAQREFLESENCDQLQGYLFSKPIEANAFTN 869 Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 57/143 (39%), Gaps = 2/143 (1%) Query: 294 RKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWP 353 K E A + G+ + + + N+A GY ++EL G L Sbjct: 316 EKASIEQLRLAGIAFSSTNEGIMITDKRNRIIDINRAYMNISGYGRDELIGKNPSILRSE 375 Query: 354 EDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPL-YFIAQIE 412 N+ Q + K + E + E +NG+VV + ++ V + L +F++ I Sbjct: 376 HHSNEFYQSIWKSLE-EERHWQGEIWNRLKNGEVVPHWVNINAVHDPNTDALTHFVSVIA 434 Query: 413 DINELKRTEQVNQQLMERITLAN 435 DI+ +K +E+ L L N Sbjct: 435 DISNIKASEEKLSHLAHHDALTN 457 Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 46/366 (12%), Positives = 106/366 (28%), Gaps = 36/366 (9%) Query: 252 ADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYS 311 AD + + P +L A + ++ + ++++ E N + Sbjct: 146 ADEIAGSFAISSFTPRQPTPFHAQLLEAAANIAGIVLNRFSSQENLQHKERLLENITQAM 205 Query: 312 AIGMALVGTEGQ----WLQTNKALCQFLGYSQEELRG--LTFQQLTWPEDLNKDLQQVEK 365 + + + + + G + E F + P+D + + Sbjct: 206 PGVVYQYHLDDELKQSFTYIGPGIETISGITAEAAIEDFSEFWEQVHPDDRSGLWASI-V 264 Query: 366 LISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQ 425 +S E R +++NG + W + + L + I DI E+ + Sbjct: 265 HTGKHGLAWSHEFRVFHKNGQMHWVRGSALPSKLGSQEGLLWNGIILDIT----PEKASI 320 Query: 426 QLMERITLANEAGGIGIWEWELKPNIFSWDKRMFEL--YEIPPHIKPNWQVWYECVLPED 483 + + +A + GI + + I ++ + Y I N + Sbjct: 321 EQLRLAGIAFSSTNEGIMITDKRNRIIDINRAYMNISGYGRDELIGKNPSILRSEHHS-- 378 Query: 484 RQHAEKVIRDSLQSRSPFKLEF--RITVKDGIRHIRALANRVLNKEGEVERLLGINMDMT 541 + I SL+ ++ E R+ + + H + + + + D++ Sbjct: 379 -NEFYQSIWKSLEEERHWQGEIWNRLKNGEVVPHWVNINAVHDPNTDALTHFVSVIADIS 437 Query: 542 EVKQLNEALFQEKER-----------LHITLDS------IGEAVVCIDMA-MKITFMNPV 583 +K E L LD E +V + + +N Sbjct: 438 NIKASEEKLSHLAHHDALTNLPNRLLFSARLDHALTHREASEKIVMFHLDLDRFKHINDS 497 Query: 584 AEKMSG 589 G Sbjct: 498 LGHKYG 503 >UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZ89_CHRVO Length = 936 Score = 641 bits (1653), Expect = 0.0, Method: Composition-based stats. Identities = 149/752 (19%), Positives = 290/752 (38%), Gaps = 25/752 (3%) Query: 360 LQQVEKLISGEINTYSMEKRYYNRNGDVVWAL--LAVSLVRHTDGTPLYFIAQIEDINEL 417 L + +L++ E + G + L L R D +A DI Sbjct: 186 LTEQARLLAELKLDSPFEWSRRDELGRLGTHLEWTRSELKRLVDELRAKTLALEADIARR 245 Query: 418 KRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYE 477 + E ++ + + GI L + + L W Sbjct: 246 REVEDALRRSENKYRELFWSNLDGIVISSLDGQVIDANPAFLNLMCYSLDQLKQQNFW-- 303 Query: 478 CVLPEDRQHAEKVIRDSLQSRSPFKLEFR---ITVKDGIRHIRALANRVLNKEGEVERLL 534 ++ E+ + E+ D+ R + EF + D + + + G + + Sbjct: 304 SLVAEESEALERFNLDNKVLRFGYCDEFEATYLNRFDNQVPVSVKTVAMRDAFGRINAVW 363 Query: 535 GINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEE 594 + D++E + E + + ++ E ++ D +I +N +++G+TQ E Sbjct: 364 RMVRDISEKRAAEERV----QLAAKVFENTVEGIMITDADRRIRSVNRAFTEITGYTQHE 419 Query: 595 ALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTL 654 LG + + + P E ++ + + + ++ ++G Y +I + Sbjct: 420 VLGQKTSIL--SSGRHDEPFYEQMWQSIAEHGSWQGELWNRRKNGEVYPEWLAINAVRNS 477 Query: 655 DGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRH 714 G V + D+TE + ++ + A D LT L NR + ++ + + +QR Sbjct: 478 LGEITHYVAIFSDLTERKAADERIQFLAHFDVLTSLPNRIHMQDRVELAIHNAVRDNQRL 537 Query: 715 ALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-N 773 AL+ +DLDRFK VN+S GH+AGD LL+ A + S++ ++LAR GGDEF +LLP + Sbjct: 538 ALLLLDLDRFKTVNESLGHSAGDTLLQVAADRIKSVMAPGEMLARQGGDEFIILLPVISD 597 Query: 774 VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASK 833 A A R+ + V + S GI++ D+ ++ AD A Y +K Sbjct: 598 PGEAALAAERVRDVFAN-PIELHNHVLTITPSIGISVYPDDGRDYETLVRNADAAMYHAK 656 Query: 834 NGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLIS 893 + GR Y A E A+ ++ ++ ++ ++ + R + + Sbjct: 657 SSGRNSYKFYTADLNARAREILAIESQLRF-ALERDEFVLHYQP--QVEMESGRIVGAEA 713 Query: 894 LKLWSCEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA--VASKGISISLPLS 950 L W+ ++ F + + + V E +Q + +++++ LS Sbjct: 714 LIRWNHPSLGLLGPVRFIQVAEERGFIVQIGNWVIAEATRQLVEWRRAGLPELTLAINLS 773 Query: 951 VAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRLAGCRIVLS 1006 L + + LE+S LP L + + I++ A +++ ++ G R+ + Sbjct: 774 ALQFRQPDLALQVKQALESSGLPGHALDIEVTESIIMEDAQATIQTIDNMKNMGLRLSID 833 Query: 1007 QVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVV 1066 G + LK AD L +D ++ + D + I A+ L M+ +A V Sbjct: 834 DFGTGYSSLSYLKRFKADKLKIDRSFVRDIPQDADDSAIARAIINMAKNLNMQVVAEGVE 893 Query: 1067 LPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 L G D + G +IA P D Sbjct: 894 TMEQWQFLEQEGCDFVQGYLIAKPLPADDFAE 925 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 55/293 (18%), Positives = 100/293 (34%), Gaps = 8/293 (2%) Query: 281 NIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQE 340 + + R + SE +R + G+ + +GQ + N A + YS + Sbjct: 236 LALEADIARRREVEDALRRSENKYRELFWSNLDGIVISSLDGQVIDANPAFLNLMCYSLD 295 Query: 341 ELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHT 400 +L+ F L E + ++ + E Y NR + V + +R Sbjct: 296 QLKQQNFWSLVAEESEALERFNLDNKVLRFGYCDEFEATYLNRFDNQVPVSVKTVAMRDA 355 Query: 401 DGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFE 460 G + DI+E + E+ Q + E GI + I S ++ E Sbjct: 356 FGRINAVWRMVRDISEKRAAEERVQLAAK----VFENTVEGIMITDADRRIRSVNRAFTE 411 Query: 461 LYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA 520 + H + D + + + S+ ++ E K+G + LA Sbjct: 412 ITGYTQHEVLGQKTSILSSGRHD-EPFYEQMWQSIAEHGSWQGELWNRRKNGEVYPEWLA 470 Query: 521 -NRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCID 572 N V N GE+ + I D+TE K +E + L S+ + D Sbjct: 471 INAVRNSLGEITHYVAIFSDLTERKAADERIQFLAHF--DVLTSLPNRIHMQD 521 >UniRef50_UPI0001C3140A diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3140A Length = 1090 Score = 640 bits (1651), Expect = 0.0, Method: Composition-based stats. Identities = 192/850 (22%), Positives = 329/850 (38%), Gaps = 37/850 (4%) Query: 274 LLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTE---GQW--LQTN 328 L+ + A + ++ + + A+ + G+ + + G W N Sbjct: 241 LIADVAALAGQVAVHLRYRRGAALLDLHER---ALAATNNGIVIAERDEETGGWPATFVN 297 Query: 329 KALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVV 388 +A Q GY +E+ G + L E + + ++ + + + R Y R+G V Sbjct: 298 EAFEQLTGYRSDEVVGRSLVLLQGEETDPEAIAEMGAALRSADECW-VTVRNYRRDGSVF 356 Query: 389 WALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIW--EWE 446 W + + V DG +I + D+ + R E + EW+ Sbjct: 357 WNEIFLMPVADDDGVVRRYIGILHDVTARVTAAVELAETESRYRTLVETIPAVTYVAEWD 416 Query: 447 LKPNIFSWDKRMFELYEIPPH-IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEF 505 + ++ E+ P +W + P+D R + + F E+ Sbjct: 417 ELGTLIYVSPQIEEMMGFPAAGWLGETSLWDTQIHPDDVDRVMAETRYAFRQEQAFDCEY 476 Query: 506 RITVKD-GIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSI 564 R+ D I + + ++ G GI D+T + AL + +ER + ++ Sbjct: 477 RLIAADGRIVWVWEHDTVIRDEHGRPRLTQGIITDVTATRIAEAALAESEERSRAVIGAL 536 Query: 565 GEAVVCIDMAMKITFMNPVAEKMSGWTQEE-------ALGVPLLTVLHITFGDNGPLMEN 617 E ++ ++ N A ++ G EE A G P + + + + Sbjct: 537 EEGLLIYGADGRVLSCNAAAVRIFGVDSEEELLGTVVAQGSPRVRMTYEDGSEVTRTNST 596 Query: 618 IYSADTSRSAIEQDVVLHCRSGGSYDVHYSITP---LSTLDGSNIGSVLVIQDVTESRKM 674 A + + VV R +++ ++T L + G+V DVTE R+ Sbjct: 597 AGRALETGLPQPERVVHFERDDDGWELWATVTSHPLLREGESRPYGAVSAFTDVTERRRA 656 Query: 675 LRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHA 734 Q+++ A HD+LT L NRA ++ L + L + AL+++DLD FKAVNDS GHA Sbjct: 657 QEQIAFLAYHDSLTRLPNRALLDEHLALALARARRAGESVALLYVDLDDFKAVNDSLGHA 716 Query: 735 AGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE---SARFIATRIISAVNDY 791 AGD LL+ +A + +++RSSD+LAR GGDEF +LL D + + SA A ++ +A+ + Sbjct: 717 AGDELLKRIAVRLRAVVRSSDLLARQGGDEFLILLTDLDKDPRLSAEAAAKQVETALIE- 775 Query: 792 HFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAH 851 F VGAS GI++ D+ A +M AD A Y K GRG + Y + Sbjct: 776 PFHLADAEFEVGASIGISIYPDDAADADTLMRHADAAMYEVKQAGRGGIASY-GGDSRKT 834 Query: 852 SERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFR 910 R ++ + R ++ ++ + +P +L W E ++ F Sbjct: 835 LARLSL-TSKLRRALQREDFVVHYQPIVAP--ATGALHAFEALVRWQDAERGVVGPNEFI 891 Query: 911 RSFSDPALSHALDRRVFHEFFQQAAKAV-ASKGISISLPLSVAGLSSATLVNDLLEQLEN 969 D L A+ V +E +Q A + + +S L + + + LE Sbjct: 892 PLAEDAGLIEAIGGWVLNEVCRQQRAWHDAGMESHVHVNVSPRQLRRPDFPSTVRDALEE 951 Query: 970 SPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADY 1025 L P +L L I A + AE V+ L G R+ + G L+ Sbjct: 952 QRLTPSMLTLEITESAAMLDAERANPIVRALHDLGVRLAIDDFGAGHSSLARLRDVPVQT 1011 Query: 1026 LLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGE 1085 L +D V + +IT I LGM T+A V L L G Sbjct: 1012 LKIDQSFLRGVPDDRQAAAMITAIIELGTALGMVTVAEGVTTDAQRRFLVDGDCPLAQGF 1071 Query: 1086 VIADAQPLDL 1095 A D Sbjct: 1072 HFARPLTADD 1081 >UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5U6_AZOSE Length = 740 Score = 640 bits (1651), Expect = 0.0, Method: Composition-based stats. Identities = 141/697 (20%), Positives = 268/697 (38%), Gaps = 23/697 (3%) Query: 413 DINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPH--IKP 470 EL + + +R + + +G + I + L I Sbjct: 51 QNRELIEARRALEDARDRYSDLYDFAPVGYMTLDEHGVILEINLTGARLLGQDRAQVIGM 110 Query: 471 NWQVWY-ECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGE 529 W + + H +V+ + + L + + IRH+R L + + G Sbjct: 111 PLSGWVPNGAVAQLFHHLRRVLSEPGRVFDHLPLHTSLVRESPIRHVR-LESIAFTQYGS 169 Query: 530 VERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSG 589 +D+++ K+ + L + + +A++ D +I +N ++G Sbjct: 170 GRLCRTALVDLSDRKREEDRLNLIAQ----VFERSTDAIMITDSLNRIVSVNRAFTTVTG 225 Query: 590 WTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSIT 649 ++ +E LG + + + ++SA + ++ ++G Y+ +I Sbjct: 226 YSADEVLGRNPKLL--ASGRHDRDFYREMWSAIERNGSWSGEISNRRKNGEIYNEWLTIH 283 Query: 650 PLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNS 709 + G + + ++T+ R ++ + A +D LT L NRA + ++ L Sbjct: 284 AVRNESGGIENCIAIYAEITDQRAAASRIQFLAHYDPLTLLPNRALLQDRMHQGLAHAAR 343 Query: 710 THQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLL 769 R A++F+DLDRFK +NDS GH GD LL+E+A + + +R D +AR GGDEF ++L Sbjct: 344 EGTRAAVLFLDLDRFKTINDSLGHLVGDHLLQEVAQRLKASVREDDTVARRGGDEFIVML 403 Query: 770 PDCN-VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIA 828 P + E A +A +II A+ + G V V S GI++ D+ ++ ADIA Sbjct: 404 PHVDSAEQAAHVAGKIIEAMEQTIPV-NGYVLNVSFSIGISVFPDDAMDPDTLIRNADIA 462 Query: 829 CYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARN 888 Y SK GR + + A ER A+ D R ++ + ++ Sbjct: 463 MYRSKASGRNQFQFFTADMNAHALERLALEND-LHRAVERGEFRLMFQPQFE---GSGSI 518 Query: 889 LWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQ--AAKAVASKGISI 945 + +L W + ++ F + L + V QQ A + K I++ Sbjct: 519 IGAEALLRWQHPQRGLVTPAEFIPVAEETGLIVPIGTWVLERACQQVRAWRDAGLKKITV 578 Query: 946 SLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH----AESVQKLRLAGC 1001 S+ +S S L+ + L S + P L L + ++ + + +L+ G Sbjct: 579 SVNISALQFSQKNLLELIRRLLAVSNIEPGTLELELTESVLMHDHVATSGLMSELKEMGV 638 Query: 1002 RIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTI 1061 R+ + G + L++ L +D ++ + I G A+ L M+ I Sbjct: 639 RMAIDDFGTGYSSLSYLRSFPISKLKIDQSFVRDLSDGGDAGAITGAIIGLAKNLNMRVI 698 Query: 1062 AGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 A V L D G + + Sbjct: 699 AEGVETAQQASFLQAQCCDEFQGHFFSQPVSPEKFAE 735 Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 55/158 (34%), Gaps = 1/158 (0%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 ++RK + E S + + + + + N+A GYS +E+ G + L Sbjct: 181 SDRKREEDRLNLIAQVFERSTDAIMITDSLNRIVSVNRAFTTVTGYSADEVLGRNPKLLA 240 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 +++ I ++S E +NG++ L + VR+ G IA Sbjct: 241 SGRHDRDFYREMWSAIE-RNGSWSGEISNRRKNGEIYNEWLTIHAVRNESGGIENCIAIY 299 Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKP 449 +I + + Q L L + + + Sbjct: 300 AEITDQRAAASRIQFLAHYDPLTLLPNRALLQDRMHQG 337 Score = 60.7 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 39/322 (12%), Positives = 103/322 (31%), Gaps = 32/322 (9%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 R+ + ++ + + +++ +G + G L+ N + LG + ++ G+ Sbjct: 57 EARRALEDARDRYSDLYDFAPVGYMTLDEHGVILEINLTGARLLGQDRAQVIGMPLSGWV 116 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRY--YNRNGDVVWALL-AVSLVRHTDGTPLYFI 408 + + + +++S + + R + L +++ ++ G Sbjct: 117 PNGAVAQLFHHLRRVLSEPGRVFDHLPLHTSLVRESPIRHVRLESIAFTQYGSGRLCR-- 174 Query: 409 AQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHI 468 + D+++ KR E I E I + I S ++ + Sbjct: 175 TALVDLSDRKREEDRLNL----IAQVFERSTDAIMITDSLNRIVSVNRAFTTVTGYSADE 230 Query: 469 KPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA-NRVLNKE 527 DR + + +++ + E K+G + L + V N+ Sbjct: 231 VLGRNPKLLASGRHDRD-FYREMWSAIERNGSWSGEISNRRKNGEIYNEWLTIHAVRNES 289 Query: 528 GEVERLLGINMDMTEVK--------------------QLNEALFQEKERLHITLDSIGEA 567 G +E + I ++T+ + + + H + A Sbjct: 290 GGIENCIAIYAEITDQRAAASRIQFLAHYDPLTLLPNRALLQDRMHQGLAHAAREGTRAA 349 Query: 568 VVCIDMAMKITFMNPVAEKMSG 589 V+ +D+ + +N + G Sbjct: 350 VLFLDLD-RFKTINDSLGHLVG 370 >UniRef50_C0N6D2 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6D2_9GAMM Length = 1203 Score = 640 bits (1651), Expect = 0.0, Method: Composition-based stats. Identities = 175/695 (25%), Positives = 309/695 (44%), Gaps = 20/695 (2%) Query: 415 NELKRTEQVNQQLMERITLANE--AGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNW 472 EL+R ++ + ++ E ++ ++ + + Sbjct: 515 RELQRRSELLAKSEKKYRRLVENLQDEYFLYSHDVNGIFNYVGPSVTLILGYSQEEF--L 572 Query: 473 QVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALAN-RVLNKEGEVE 531 Q + + + + + + E I K G H A+ N EV Sbjct: 573 QHYLSFLPETEVNQLVPLFTEHTLAGYKSNYEVEILDKKGGLHTLAVTEVPSYNDNKEVI 632 Query: 532 RLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWT 591 + GI D+TE K + L E+L + ++ A+V +D A +I ++NP ++G+ Sbjct: 633 GVEGIARDITEFKASQQKL----EKLSLAVEHSPNAIVVMDRAGEIEYVNPKFTSITGYH 688 Query: 592 QEEALGVPLLTVLHITFGDNGP-LMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITP 650 +E LG I G N P + + I+ ++ ++G Y I P Sbjct: 689 NDEKLGR---WPDLINSGVNMPGIYDEIWQTIRRGDDWRGELQYRKKNGDLYWAQELIAP 745 Query: 651 LSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNST 710 + +G V D+TE+R++ + SY A+HD LT L NR F+ +L ++ Sbjct: 746 MLNSEGHATHFVATQIDITEARRLSEETSYQATHDQLTGLINRHEFDLRLERVVLAAKHN 805 Query: 711 HQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLP 770 HAL F+DLD+FK VND+ GH AGD LLR++ SL+ S +RS D +ARLGGDEF +L+ Sbjct: 806 LTEHALCFLDLDQFKLVNDTCGHIAGDELLRQIGSLLQSNVRSRDTIARLGGDEFAVLME 865 Query: 771 DCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACY 830 C+++ A +I+ + D+ F W+ VG S G+ +ID + + E + D ACY Sbjct: 866 HCSIDRAYKACEQILQLLQDFRFHWQDYTFTVGGSIGLAIIDQHTRDSNEALKHVDTACY 925 Query: 831 ASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWR-MIKENQLMMLAHGVASPRIPEARNL 889 ++K+ GR RV V+ R + + + +++ ++ A + PE Sbjct: 926 SAKDAGRNRVEVHREDSLRLKQRRGEIHWSTEINDALDDDRFLLYAQPIQPVMNPERGMS 985 Query: 890 WLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVA--SKGISISL 947 + + +++ +GEI F + + +DR V F K A +K ++S+ Sbjct: 986 YEVLVRMLRKDGEISPPGAFLPAAERYNSINRIDRWVVSHTFDWLNKNAAKLNKVATVSI 1045 Query: 948 PLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRI 1003 LS + +++ ++EQLE + +P + I A + + + ++ LR +G Sbjct: 1046 NLSGLSMGDESMLTFIIEQLETAKIPAEKIKFEITETAAIANLRAATKFIETLRESGIHF 1105 Query: 1004 VLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAG 1063 L G L F LK D L +DG ++ + +D ++ I +G++TIA Sbjct: 1106 SLDDFGSGLSSFAYLKKLKVDSLKIDGMFVKDMLIDPLDFEMVKSINEIGHVMGLETIAE 1165 Query: 1064 PVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 V ++ LS IGVD + G I P+D ++N Sbjct: 1166 FVESEAILAKLSEIGVDFVQGYAIGKPAPIDDILN 1200 Score = 81.5 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 100/280 (35%), Gaps = 12/280 (4%) Query: 281 NIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTE--GQWLQTNKALCQFLGYS 338 N + + + +++SE +R +E L + G + ++ LGYS Sbjct: 508 NEVAKKTRELQRRSELLAKSEKKYRRLVENLQDEYFLYSHDVNGIFNYVGPSVTLILGYS 567 Query: 339 QEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVR 398 QEE L E E ++G + Y +E ++ G + + Sbjct: 568 QEEFLQHYLSFLPETEVNQLVPLFTEHTLAGYKSNYEVE--ILDKKGGLHTLAVTEVPSY 625 Query: 399 HTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRM 458 + + + DI E + +QQ +E+++LA E I + I + + Sbjct: 626 NDNKEVIGVEGIARDITEF----KASQQKLEKLSLAVEHSPNAIVVMDRAGEIEYVNPKF 681 Query: 459 FELYEIPPHIKPNWQVWYECVLPE-DRQHAEKVIRDSLQSRSPFKLEFRITVKD-GIRHI 516 + H W + + + I +++ ++ E + K+ + Sbjct: 682 TSITGY--HNDEKLGRWPDLINSGVNMPGIYDEIWQTIRRGDDWRGELQYRKKNGDLYWA 739 Query: 517 RALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKER 556 + L +LN EG + +D+TE ++L+E + Sbjct: 740 QELIAPMLNSEGHATHFVATQIDITEARRLSEETSYQATH 779 Score = 63.4 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 51/148 (34%), Gaps = 7/148 (4%) Query: 46 LWFPTSIMMVAFYRHAGRMWPGIALSCSLGNIAASILLFSTSS-LNMTWTTINIVEAVVG 104 +W P SI + A + P L ++ S + +++ A Sbjct: 35 MWLPASIAVSAVLLWGFSLLPAAFFGEFLLAMSLHGWSDGASVNIATIMGVESLLLAFSA 94 Query: 105 AVLLRKLLPWYNPLQNLADWLRLALGSAIVPPLLG------GVLVVLLTPGDDPLRAFLI 158 LL + W + L L +A++ PL+ GV + + D + F I Sbjct: 95 RYLLIRFSRWPSLLNQDKQIFTFFLLAAVIAPLISSGVIAIGVALTGDSILADTVSPFAI 154 Query: 159 WVLSESIGALALVPLGLLFKPHYLLRHR 186 L + IG + + P+ F + R Sbjct: 155 SWLGKVIGVVMVCPIMFSFFAYPRKLWR 182 >UniRef50_C6MMM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MMM5_9DELT Length = 1097 Score = 640 bits (1650), Expect = 0.0, Method: Composition-based stats. Identities = 127/573 (22%), Positives = 225/573 (39%), Gaps = 21/573 (3%) Query: 535 GINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCID---MAMKITFMNPVAEKMSGWT 591 + ++ E + EAL Q + +DS ++ D + I ++NP E+++G+ Sbjct: 386 ALETEIAEHRDAEEALRQRQR----AIDSSSNGIMITDALELDHPIIYVNPAFERITGYA 441 Query: 592 QEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPL 651 E LG + G +E I A ++ + + G + S++P+ Sbjct: 442 ASEVLGRNPRLLCSGDREQLG--LEVIRVALCELREGHAELRNYRKDGSLFWNALSVSPV 499 Query: 652 STLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTH 711 G V ++ D+TE ++ QL Y ++HD LT L NR ++ L Sbjct: 500 LNAAGEVTNYVGIVNDITERKRYEEQLEYQSNHDGLTGLPNRNLLGDRIGQALTYAERYQ 559 Query: 712 QRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD 771 ++ A+ FIDLD FK +NDS GH GD LL+ A + +RS D +AR GGDEF ++L D Sbjct: 560 RQTAVFFIDLDHFKFINDSLGHDMGDKLLQIAARRLSECVRSIDTVARHGGDEFVIVLSD 619 Query: 772 CNV-ESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACY 830 V E A +A +I AV + V S GI+L + A ++ AD+A Y Sbjct: 620 LAVSEDAAKVARKIQDAVCR-PYQIGEHELVVSCSTGISLYPKDGSDAQVLLKNADVAMY 678 Query: 831 ASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLW 890 +K GR Y R M R ++ ++ ++ R Sbjct: 679 RAKQCGRNNFQFYTGDLNDIVLARLTMEK-YLRRALERDEFLVHYQPKVDLL--SGRITG 735 Query: 891 LISLKLWS-CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS--KGISISL 947 + +L W E I +F + L A+ V Q + +++ Sbjct: 736 MEALVRWQSPELGFISPASFIPLAEETGLIVAIGEWVLRTACAQNKAWQDDGLPPMVVAV 795 Query: 948 PLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRI 1003 LS L + + E + L PR + L + ++D + + L+ G ++ Sbjct: 796 NLSPRQFRQEDLADTVHRIAEETGLAPRYIELEVVESLLMDDVDGAVAMLDALKELGVQL 855 Query: 1004 VLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAG 1063 + G + LK D + +D ++ + ++ + A L ++ +A Sbjct: 856 TMDDFGTGYSSLSYLKRFPFDMMKIDQSFVRDITRDPGSAAIVRTVISLAHTLNLRVVAE 915 Query: 1064 PVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 + + L G+ D + G + P Sbjct: 916 GIETEGQLGYLRGLACDEMQGFYFSRPVPAAEF 948 Score = 91.5 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 60/142 (42%), Gaps = 4/142 (2%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVG---TEGQWLQTNKALCQFLGYSQEELRGLTFQ 348 AE + E+ + A++ S+ G+ + + + N A + GY+ E+ G + Sbjct: 392 AEHRDAEEALRQRQRAIDSSSNGIMITDALELDHPIIYVNPAFERITGYAASEVLGRNPR 451 Query: 349 QLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFI 408 L + L+ + + E+ E R Y ++G + W L+VS V + G ++ Sbjct: 452 LLCSGDREQLGLEVIRVALC-ELREGHAELRNYRKDGSLFWNALSVSPVLNAAGEVTNYV 510 Query: 409 AQIEDINELKRTEQVNQQLMER 430 + DI E KR E+ + Sbjct: 511 GIVNDITERKRYEEQLEYQSNH 532 Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 51/143 (35%), Gaps = 4/143 (2%) Query: 416 ELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVW 475 R + + +R ++ G + EL I + + Sbjct: 392 AEHRDAEEALRQRQRAIDSSSNGIMITDALELDHPIIYVNPAFERITGYAASEVLGRNP- 450 Query: 476 YECVLPEDRQHA-EKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA-NRVLNKEGEVERL 533 + DR+ +VIR +L E R KDG AL+ + VLN GEV Sbjct: 451 -RLLCSGDREQLGLEVIRVALCELREGHAELRNYRKDGSLFWNALSVSPVLNAAGEVTNY 509 Query: 534 LGINMDMTEVKQLNEALFQEKER 556 +GI D+TE K+ E L + Sbjct: 510 VGIVNDITERKRYEEQLEYQSNH 532 >UniRef50_D2UCH8 Hypothetical two-component system sensor protein n=1 Tax=Xanthomonas albilineans RepID=D2UCH8_XANAL Length = 716 Score = 640 bits (1650), Expect = 0.0, Method: Composition-based stats. Identities = 159/703 (22%), Positives = 293/703 (41%), Gaps = 34/703 (4%) Query: 405 LYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI 464 L+ + + + + + QQ + LA A G W+++L+ R + Sbjct: 15 LHALLYRRRMQQKLKCYEELQQHEHYLKLALWASGEHFWDYDLQNRTL----RRMRADDA 70 Query: 465 PPHIKPNWQVWYE----CVLPEDRQHAEKVIRDSLQSRSPFKL-EFRI-TVKDGIRHIRA 518 PH++ V +E + P+D Q A+ + + L+ + L E+R+ DG+ Sbjct: 71 NPHLQDIALVIHEDDPLRIHPDDIQQAKLALSEHLEGLTAIYLAEYRVDLTGDGVWRWAR 130 Query: 519 LANRVLNKE--GEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMK 576 + RV++ + G RL G D+T +Q + E L S+ EAV +D + Sbjct: 131 VRGRVVDYDAVGNPRRLAGTARDITSHRQADLERRIAAEVLR----SMSEAVAVLDEERR 186 Query: 577 ITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHC 636 +NP +++G+++ E LG P+ + H P+++ D Sbjct: 187 FISVNPAFTRITGYSEREVLGQPMTLIDHAPNVPPPPMLDQ-------GRHWRGDAWKRR 239 Query: 637 RSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASF 696 + G H + DG V+V++D+TE ++ ++L Y A++D LT L NRA Sbjct: 240 KDGHEILCHMRRNTVVDADGRQSFQVVVLEDITEQKRAEQELRYLANYDTLTSLPNRALL 299 Query: 697 EKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDV 756 ++L + A++F+DLDRFK +NDS GH GD +LR +A + + Sbjct: 300 SERLARAIVRARRQAGAVAVLFLDLDRFKDINDSQGHPVGDQVLRAVAERLQQAVGPQHT 359 Query: 757 LARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNN 815 +ARL GDEF +++ D + + A +A R+++A + + R V S GI+L + Sbjct: 360 VARLAGDEFTVVVEDIVSQDEAESVAARVLAAFEPPLRLDDRREVAVSTSIGISLFPQHA 419 Query: 816 HQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLA 875 +E++ AD A Y +K GR VY A RA ++ + + + +L ++ Sbjct: 420 LLPSELLKHADTAMYQAKAAGRRNAQVYSASMDEATRHRATLASTLRKIPLDQ-ELKLVY 478 Query: 876 HGVASPRIPEARNLWLISLKLWSC-EGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQA 934 S R E R + + +L W + + F + L + V + Sbjct: 479 QPRYSLR--EQRVVSVEALLRWHSADFGPVSPSQFIPLAEETGLILQIGEWVLRQACSAL 536 Query: 935 AKA--VASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH--- 989 + + +S+ +S L + L + + L + +P + L + ++ Sbjct: 537 RDWRQMGLTDLCMSINVSAIQLERSNLPELMAQILAETGVPAANVELELTESVVMSQVGK 596 Query: 990 -AESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITI 1048 AE + R G + + G LK + L +D +++ + D + + Sbjct: 597 SAEILHACRELGLTLAIDDFGTGYSSLAYLKRLPINTLKIDQAFISDLSLDPDDASITST 656 Query: 1049 IQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQ 1091 I L +K +A V P + L G D I G ++A A Sbjct: 657 IIAMGHSLDLKVVAEGVEQPSQLMFLREHGCDEIQGHLVAPAL 699 Score = 69.9 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 57/149 (38%), Gaps = 10/149 (6%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + + R + R+ E +A++ E +++ N A + GYS+ E+ G Sbjct: 154 ITSHRQADLERRIAAEVLRSMSE----AVAVLDEERRFISVNPAFTRITGYSEREVLGQP 209 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 + ++ + + + + ++G + + + V DG + Sbjct: 210 MTLIDHAPNVPP------PPMLDQGRHWRGDAWKRRKDGHEILCHMRRNTVVDADGRQSF 263 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLAN 435 + +EDI E KR EQ + L TL + Sbjct: 264 QVVVLEDITEQKRAEQELRYLANYDTLTS 292 Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 65/444 (14%), Positives = 132/444 (29%), Gaps = 68/444 (15%) Query: 274 LLILLPANIMTMVMYAFRAERK-----HISESETHFRNAMEYSAIGMALVGTEGQWLQ-- 326 L I + ++Y R ++K + + E + + A+ S + + L+ Sbjct: 6 LAIGGLTVALHALLYRRRMQQKLKCYEELQQHEHYLKLALWASGEHFWDYDLQNRTLRRM 65 Query: 327 ----TNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRY-Y 381 N L + P+D+ + + + + G Y E R Sbjct: 66 RADDANPHLQDI-----ALVIHEDDPLRIHPDDIQQAKLALSEHLEGLTAIYLAEYRVDL 120 Query: 382 NRNGDVVWALLAVSLV-RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGI 440 +G WA + +V G P DI ++ + + E + +EA Sbjct: 121 TGDGVWRWARVRGRVVDYDAVGNPRRLAGTARDITSHRQADLERRIAAEVLRSMSEA--- 177 Query: 441 GIWEWELKPNIFSWDKRMFELYEIPPHI----KPNWQVWYECVLPEDRQHAEKVIRDSLQ 496 + + + S + + V P L Sbjct: 178 -VAVLDEERRFISVNPAFTRITGYSEREVLGQPMTLIDHAPNVPPPP----------MLD 226 Query: 497 SRSPFKLEFRITVKDGIRHI-RALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKE 555 ++ + KDG + N V++ +G + + D+TE K+ + L Sbjct: 227 QGRHWRGDAWKRRKDGHEILCHMRRNTVVDADGRQSFQVVVLEDITEQKRAEQELRYLAN 286 Query: 556 RLHITLDSIGE-AVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPL 614 TL S+ A++ +A I A + +G L + L I P+ Sbjct: 287 Y--DTLTSLPNRALLSERLARAIV----RARRQAGAVA--VLFLDLDRFKDINDSQGHPV 338 Query: 615 MENIYSADTSR--SAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESR 672 + + A R A+ + +G + V V++D+ Sbjct: 339 GDQVLRAVAERLQQAVGPQHTVARLAGDEFTV-------------------VVEDIVSQD 379 Query: 673 KMLR-QLSYSASHDALTHLANRAS 695 + A+ + L +R Sbjct: 380 EAESVAARVLAAFEPPLRLDDRRE 403 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 1144 0.0 UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 1094 0.0 UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/P... 1031 0.0 UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 1024 0.0 UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/P... 1010 0.0 UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/P... 1001 0.0 UniRef50_A1SU67 Diguanylate cyclase/phosphodiesterase with PAS/P... 1001 0.0 UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/P... 997 0.0 UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 T... 996 0.0 UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 992 0.0 UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/P... 987 0.0 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 986 0.0 UniRef50_P38097 Uncharacterized protein yegE n=72 Tax=Proteobact... 982 0.0 UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/P... 975 0.0 UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 975 0.0 UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/P... 973 0.0 UniRef50_A8FYM5 Signal transduction protein containing a membran... 971 0.0 UniRef50_Q3A4W5 Response regulator receiver modulated diguanylat... 968 0.0 UniRef50_A8H6Y6 Diguanylate cyclase/phosphodiesterase with PAS/P... 965 0.0 UniRef50_C6XBJ6 Diguanylate cyclase/phosphodiesterase with PAS/P... 962 0.0 UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 962 0.0 UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsul... 957 0.0 UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/P... 956 0.0 UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncult... 955 0.0 UniRef50_Q2BQI6 Putative uncharacterized protein n=1 Tax=Neptuni... 952 0.0 UniRef50_C6XCZ6 Diguanylate cyclase/phosphodiesterase with PAS/P... 951 0.0 UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/P... 951 0.0 UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/P... 949 0.0 UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/P... 945 0.0 UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/P... 941 0.0 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 939 0.0 UniRef50_C6ME82 Response regulator receiver modulated diguanylat... 938 0.0 UniRef50_Q2SFI2 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC ... 938 0.0 UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 938 0.0 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 932 0.0 UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4... 932 0.0 UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 931 0.0 UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/P... 931 0.0 UniRef50_Q12L20 Diguanylate cyclase/phosphodiesterase with PAS/P... 927 0.0 UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 927 0.0 UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 ... 926 0.0 UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7... 925 0.0 UniRef50_A0LKD9 Response regulator receiver modulated diguanylat... 924 0.0 UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteob... 922 0.0 UniRef50_A6V917 Membrane protein, putative n=6 Tax=Pseudomonas a... 922 0.0 UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/P... 922 0.0 UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/P... 918 0.0 UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/P... 914 0.0 UniRef50_Q087W4 Diguanylate cyclase/phosphodiesterase with PAS/P... 912 0.0 UniRef50_Q88QU8 Sensory box protein n=22 Tax=Gammaproteobacteria... 910 0.0 UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 909 0.0 UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/P... 907 0.0 UniRef50_C9PLR8 Diguanylate cyclase/phosphodiesterase with PAS/P... 907 0.0 UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n... 906 0.0 UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magneto... 906 0.0 UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 905 0.0 UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 904 0.0 UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/P... 899 0.0 UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus ... 898 0.0 UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/P... 898 0.0 UniRef50_C7RN47 Diguanylate cyclase/phosphodiesterase with PAS/P... 897 0.0 UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/P... 895 0.0 UniRef50_D0IUW1 Diguanylate cyclase/phosphodiesterase with n=3 T... 894 0.0 UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus... 894 0.0 UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/P... 893 0.0 UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/P... 893 0.0 UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/P... 892 0.0 UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 891 0.0 UniRef50_Q0KDS7 Predicted signal transduction protein containing... 890 0.0 UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/P... 890 0.0 UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromob... 889 0.0 UniRef50_B8DLV2 Diguanylate cyclase/phosphodiesterase with PAS/P... 889 0.0 UniRef50_B4B330 Diguanylate cyclase/phosphodiesterase with PAS/P... 889 0.0 UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 885 0.0 UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/P... 884 0.0 UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax... 883 0.0 UniRef50_A0LA87 Diguanylate cyclase/phosphodiesterase with PAS/P... 883 0.0 UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/P... 883 0.0 UniRef50_A8FY98 Signal transduction protein containing a membran... 882 0.0 UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 880 0.0 UniRef50_B6BGA2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 879 0.0 UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/P... 878 0.0 UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 878 0.0 UniRef50_Q31EA2 Diguanylate cyclase/phosphodiesterase with PAS/P... 877 0.0 UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/P... 876 0.0 UniRef50_C7LQR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 874 0.0 UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 874 0.0 UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/P... 874 0.0 UniRef50_Q21R50 Diguanylate cyclase/phosphodiesterase with PAS/P... 873 0.0 UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/P... 873 0.0 UniRef50_A4Y0E0 Diguanylate cyclase/phosphodiesterase with PAS/P... 873 0.0 UniRef50_B7JWK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 872 0.0 UniRef50_Q60BD0 Sensory box protein n=1 Tax=Methylococcus capsul... 872 0.0 UniRef50_Q47ED8 Response regulator receiver modulated diguanylat... 871 0.0 UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/P... 871 0.0 UniRef50_B1Y6A9 Diguanylate cyclase/phosphodiesterase with PAS/P... 871 0.0 UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 870 0.0 UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS... 869 0.0 UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultu... 869 0.0 UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/P... 868 0.0 UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 868 0.0 UniRef50_C6BWZ0 Diguanylate cyclase/phosphodiesterase with PAS/P... 868 0.0 UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/P... 867 0.0 UniRef50_C4XRM5 Putative signaling protein n=1 Tax=Desulfovibrio... 867 0.0 UniRef50_Q2BB47 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 867 0.0 UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Ma... 867 0.0 UniRef50_Q7NTV0 Putative uncharacterized protein n=1 Tax=Chromob... 866 0.0 UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/P... 866 0.0 UniRef50_Q5P8Z7 Sensory box/GGDEF family protein n=3 Tax=cellula... 864 0.0 UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/P... 864 0.0 UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/P... 863 0.0 UniRef50_B2JAQ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 863 0.0 UniRef50_Q47HF3 Response regulator receiver modulated diguanylat... 862 0.0 UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/P... 862 0.0 UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 861 0.0 UniRef50_B8KF61 Ggef/eal/pas/pac-domain containing protein n=1 T... 860 0.0 UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromato... 860 0.0 UniRef50_Q1N2J6 Putative uncharacterized protein n=1 Tax=Bermane... 860 0.0 UniRef50_Q31NI4 Response regulator receiver modulated diguanylat... 860 0.0 UniRef50_C7CCD7 Putative diguanylate cyclase (GGDEF) /phosphodie... 859 0.0 UniRef50_C7LTY3 Diguanylate cyclase/phosphodiesterase with PAS/P... 858 0.0 UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 858 0.0 UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria Re... 858 0.0 UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 857 0.0 UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/P... 857 0.0 UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromob... 857 0.0 UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxaloba... 855 0.0 UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/P... 855 0.0 UniRef50_Q4C8S6 PAS:GGDEF n=1 Tax=Crocosphaera watsonii WH 8501 ... 855 0.0 UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/P... 854 0.0 UniRef50_Q2BHU8 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 853 0.0 UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/P... 853 0.0 UniRef50_C1DD31 Predicted signal transduction protein containing... 852 0.0 UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/P... 851 0.0 UniRef50_Q47X88 Sensory box sensor/GGDEF/EAL domain protein n=2 ... 850 0.0 UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/P... 850 0.0 UniRef50_A0LD38 Diguanylate cyclase/phosphodiesterase with PAS/P... 850 0.0 UniRef50_C1DB08 Predicted signal transduction protein containing... 849 0.0 UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candida... 849 0.0 UniRef50_Q88LF0 Sensory box protein n=16 Tax=Proteobacteria RepI... 849 0.0 UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/P... 848 0.0 UniRef50_A6UJR0 Diguanylate cyclase/phosphodiesterase with PAS/P... 847 0.0 UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/P... 847 0.0 UniRef50_B8GLY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 846 0.0 UniRef50_C5SCB7 Diguanylate cyclase/phosphodiesterase with PAS/P... 846 0.0 UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/P... 845 0.0 UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthin... 845 0.0 UniRef50_A0L914 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ma... 845 0.0 UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/P... 844 0.0 UniRef50_C6MMM5 Response regulator receiver modulated diguanylat... 843 0.0 UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/P... 843 0.0 UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 843 0.0 UniRef50_Q5ZZI1 Sensory box (GGDEF/EAL domain) regulatory protei... 842 0.0 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 842 0.0 UniRef50_Q1GXN7 Diguanylate cyclase/phosphodiesterase n=3 Tax=Pr... 842 0.0 UniRef50_A4ACX6 Sensory box/GGDEF/EAL family protein n=1 Tax=Con... 841 0.0 UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 841 0.0 UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling p... 841 0.0 UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 840 0.0 UniRef50_C6CKZ2 Diguanylate cyclase/phosphodiesterase with PAS/P... 840 0.0 UniRef50_A5GBG4 Response regulator receiver modulated diguanylat... 839 0.0 UniRef50_A4U4T7 Two-component sensory box protein n=3 Tax=Magnet... 838 0.0 UniRef50_A0L8P4 Response regulator receiver modulated diguanylat... 837 0.0 UniRef50_Q47Z22 Sensory box/GGDEF/GAF/EAL domain protein n=5 Tax... 836 0.0 UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio... 835 0.0 UniRef50_C7RQ11 Response regulator receiver modulated diguanylat... 835 0.0 UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/P... 834 0.0 UniRef50_C5V0L7 Diguanylate cyclase/phosphodiesterase with PAS/P... 834 0.0 UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 834 0.0 UniRef50_A6WKV6 Diguanylate cyclase/phosphodiesterase with PAS/P... 833 0.0 UniRef50_Q55576 Slr0359 protein n=2 Tax=Cyanobacteria RepID=Q555... 833 0.0 UniRef50_B0UG16 Diguanylate cyclase/phosphodiesterase with PAS/P... 833 0.0 UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/P... 833 0.0 UniRef50_A1JKY3 Putative inner membrane protein n=11 Tax=Enterob... 833 0.0 UniRef50_C5V0K3 Diguanylate cyclase/phosphodiesterase with PAS/P... 832 0.0 UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/P... 831 0.0 UniRef50_Q0AAW8 Diguanylate cyclase/phosphodiesterase with PAS/P... 831 0.0 UniRef50_C6CDP3 Diguanylate cyclase/phosphodiesterase with PAS/P... 830 0.0 UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/P... 830 0.0 UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/P... 830 0.0 UniRef50_B2UHK4 Diguanylate cyclase/phosphodiesterase with PAS/P... 829 0.0 UniRef50_Q2BR92 Putative uncharacterized protein n=1 Tax=Neptuni... 829 0.0 UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 828 0.0 UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/P... 828 0.0 UniRef50_Q2RRN9 Sensor protein n=3 Tax=Proteobacteria RepID=Q2RR... 828 0.0 UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus ... 828 0.0 UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromob... 827 0.0 UniRef50_P72843 Regulatory components of sensory transduction sy... 827 0.0 UniRef50_C3X4J8 Diguanylate cyclase/phosphodiesterase with PAS/P... 827 0.0 UniRef50_A4G3M6 Putative two-component response regulator n=1 Ta... 826 0.0 UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/P... 826 0.0 UniRef50_B1Y3M1 Diguanylate cyclase/phosphodiesterase with PAS/P... 825 0.0 UniRef50_C6X7I8 Response regulator receiver modulated diguanylat... 825 0.0 UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromato... 824 0.0 UniRef50_A4Y0Z3 Diguanylate cyclase/phosphodiesterase with PAS/P... 824 0.0 UniRef50_Q2W4Z4 Predicted signal transduction protein containing... 824 0.0 UniRef50_A3JAM8 Response regulator receiver modulated diguanylat... 824 0.0 UniRef50_Q21WZ6 Response regulator receiver modulated diguanylat... 823 0.0 UniRef50_B9ZNS8 Diguanylate cyclase/phosphodiesterase with PAS/P... 823 0.0 UniRef50_Q2BPN3 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 823 0.0 UniRef50_B1Y791 Diguanylate cyclase/phosphodiesterase with PAS/P... 822 0.0 UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteo... 822 0.0 UniRef50_C6P1Y8 Diguanylate cyclase/phosphodiesterase with PAS/P... 822 0.0 UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/P... 820 0.0 UniRef50_B0TF94 Predicted signal transduction domain protein n=1... 820 0.0 UniRef50_Q31MH3 Diguanylate cyclase/phosphodiesterase with PAS/P... 820 0.0 UniRef50_Q2BPB1 Regulatory component of sensory transduction sys... 820 0.0 UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 820 0.0 UniRef50_A0L8C6 Response regulator receiver modulated diguanylat... 819 0.0 UniRef50_C4ZM30 Diguanylate cyclase/phosphodiesterase with PAS/P... 818 0.0 UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Hermini... 817 0.0 UniRef50_D2M1V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 817 0.0 UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/P... 817 0.0 UniRef50_Q8DIH6 Tlr1612 protein n=1 Tax=Thermosynechococcus elon... 817 0.0 UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/P... 817 0.0 UniRef50_Q31M30 Diguanylate cyclase/phosphodiesterase with PAS/P... 815 0.0 UniRef50_C6E953 Response regulator receiver modulated diguanylat... 814 0.0 UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/P... 814 0.0 UniRef50_Q2BL35 Sensory box/GGDEF/GAF/EAL domain protein n=1 Tax... 814 0.0 UniRef50_C6P3H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 813 0.0 UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/P... 813 0.0 UniRef50_C5S8G6 Diguanylate cyclase/phosphodiesterase with PAS/P... 812 0.0 UniRef50_C7R9A3 Diguanylate cyclase/phosphodiesterase with PAS/P... 812 0.0 UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/P... 812 0.0 UniRef50_C5V0J9 Diguanylate cyclase/phosphodiesterase with PAS/P... 812 0.0 UniRef50_C6P6X8 Diguanylate cyclase/phosphodiesterase with PAS/P... 811 0.0 UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/P... 810 0.0 UniRef50_C5V280 Diguanylate cyclase/phosphodiesterase with PAS/P... 810 0.0 UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacter... 808 0.0 UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus... 808 0.0 UniRef50_Q0VL09 Sensory box protein n=2 Tax=Alcanivorax RepID=Q0... 808 0.0 UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/P... 808 0.0 UniRef50_B2JN77 Diguanylate cyclase/phosphodiesterase with PAS/P... 808 0.0 UniRef50_A1S8A3 Diguanylate cyclase/phosphodiesterase with PAS/P... 808 0.0 UniRef50_Q607V4 Sensory box protein/GGDEF domain protein n=1 Tax... 808 0.0 UniRef50_Q21UE9 Diguanylate cyclase/phosphodiesterase with PAS/P... 807 0.0 UniRef50_A6QA23 Putative uncharacterized protein n=1 Tax=Sulfuro... 806 0.0 UniRef50_Q1ASD1 Diguanylate cyclase/phosphodiesterase with PAS/P... 806 0.0 UniRef50_Q478L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 806 0.0 UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/P... 804 0.0 UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curviba... 803 0.0 UniRef50_Q2W5V0 Predicted signal transduction protein containing... 803 0.0 UniRef50_Q21SH7 Diguanylate cyclase/phosphodiesterase with PAS/P... 803 0.0 UniRef50_C5T198 Diguanylate cyclase/phosphodiesterase with PAS/P... 803 0.0 UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplast... 803 0.0 UniRef50_Q72EZ6 Sensory box/GGDEF domain/EAL domain protein n=3 ... 803 0.0 UniRef50_UPI0001AEC0A6 sensory box protein n=1 Tax=Alteromonas m... 802 0.0 UniRef50_Q30T73 Diguanylate cyclase/phosphodiesterase with PAS/P... 802 0.0 UniRef50_B4RTU5 Sensory box protein n=2 Tax=Alteromonadales RepI... 799 0.0 UniRef50_B8GQW3 Signal transduction protein containing a membran... 798 0.0 Sequences not found previously or not previously below threshold: >UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6V4_METSD Length = 1126 Score = 1144 bits (2961), Expect = 0.0, Method: Composition-based stats. Identities = 237/1119 (21%), Positives = 426/1119 (38%), Gaps = 54/1119 (4%) Query: 13 PHPLLHLVSLGLVSFIFTLFS---LELSQFGTQLAPLWFPTSIMMVAFYRHAGRMWPGIA 69 P L ++V L ++ F++ L L + + + R WP I Sbjct: 11 PLSLRNIVKLSIIVFVYCLLGSLNLWIPIPDAWATLISPTAGFSLAILLVFGYRAWPAIF 70 Query: 70 LSCSLGNIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQNLADWLRLAL 129 + ++ A++ + T + +E ++ LL+++ + L L D+L L Sbjct: 71 MGSLFTHLHATVYYVAA-----TMAVGDTLETLLACYLLKQVARFDPALIRLRDFLTLVF 125 Query: 130 GSAIVPPLLGGVLVVLLTPG-----DDPLRAFLIWVLSESIGALALVPLGLLFKPHYLLR 184 + + PL+ ++ VL+ +F L ++ L P L F + +R Sbjct: 126 FAVGISPLVSALINVLMLVVVGADTTALANSFTNSWLEDAFSYLLFTPAVLAFYHYEPIR 185 Query: 185 HRNPRL----------LFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRME 234 R+ +F LLT+ + S +S L P F + L+MW+A+R + Sbjct: 186 WSWARVGEALILAGLVVFSCLLTMLGAMDKS-MSQLMQPQAF-MLFPLIMWAALRFHQRG 243 Query: 235 AFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAER 294 A L L M A A W+ L++ ++ + Sbjct: 244 AALSVLFVAMTALWGGAHGLGTFAHDFAQSNLLDYWMYVLVLSSTGVALSGLNAGRIRSE 303 Query: 295 KHISESETHFRNAMEY---SAIGMALVGTEGQWLQTNKALCQFLGYSQEEL-RGLTFQQL 350 + E + + G+A++ G+ + N AL + GYS ++ G F L Sbjct: 304 ARLKEQLDTYDALLHAQADVNEGVAII-HRGKIVYGNDALWRIGGYSPGDIPLGSDFFSL 362 Query: 351 TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQ 410 P D + + ++ + E +NG + +A + R + Sbjct: 363 IHPSDRKRVSEIYQQRLQDMDVPTRYEALGLGKNGRAIHIEIAAAQYRDDSQRI---VTL 419 Query: 411 IEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIP-PHIK 469 I DI+ K+ E + + E+ +W K L P Sbjct: 420 IIDISSRKKAEAELVKSQQDYRELVESVQAIVWRAIPGGKFTFVSKEAEALLGYPLAQWT 479 Query: 470 PNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVL--NKE 527 + W + + P+DR + R F ++R+ DG +V+ Sbjct: 480 TDPGFWVDKIHPDDRDWVVEYCRTESLKLQSFDFDYRMIAADGRVVWMKDIVKVIPNMSN 539 Query: 528 GEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKM 587 L+G+ +D+T K L D+ E +V D A ++ +N +++ Sbjct: 540 TRPAELVGVMLDITASKAAEADL----RLARQVFDNTAEGIVITDPAFRVLEVNQAYQQI 595 Query: 588 SGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYS 647 +G+ +EE +G + E I+ ++ +SG SY S Sbjct: 596 TGYDKEEIIGKLPSVMQA--GLHEAAYYEGIWQTLRREGQWVGEIWNRRKSGESYPEWLS 653 Query: 648 ITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTV 707 I+ ++ GS V V D+T+ + +L + A+HDALTHL NRA ++++ L Sbjct: 654 ISQVADAKGSVQNYVAVFTDITQRKLSEERLQFLANHDALTHLPNRALLQERIDQALFRA 713 Query: 708 NSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGL 767 A++FIDLDRFK +ND+ GH GD LL+E A + LR +D +AR GGDEF + Sbjct: 714 QRNKTAIAVLFIDLDRFKIINDTLGHQTGDMLLQEAAKRLKECLRETDTVARQGGDEFVV 773 Query: 768 LLPDCNVES-ARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQAD 826 L+ DC IA +I++ + FI GR + AS GI++ D+ A ++ AD Sbjct: 774 LVEDCGDTDYLNTIARKIMATLAQ-PFILVGRELFISASIGISVYPDDGLDTASLLKHAD 832 Query: 827 IACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEA 886 A Y +K G+ Y + E + + + R ++ N+ ++ R Sbjct: 833 AAMYRAKESGKNTFRFYAAEANTNSVELLTLENNLR-RAVERNEFVLHYQPKVDLR--SQ 889 Query: 887 RNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVA--SKGI 943 + + ++ W E ++ F + L + + E +QA + + + Sbjct: 890 KIIGAEAVVRWQHPELGMLSPMQFIPLAEETGLIIDIGAWIMRESCRQAVEWQQLTGQNV 949 Query: 944 SISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLA 999 +++ LS TL + + L S L P L L I I+ +AE +Q Sbjct: 950 RVAVNLSARQFRDETLRQTIADALTESGLTPDCLELEITESMIMHNAERAREVLQHFHDL 1009 Query: 1000 GCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMK 1059 G +++ G F LK D L +D ++ ++ D + I A L +K Sbjct: 1010 GAHVLIDDFGTGYSSFGYLKHFPIDSLKIDRSFVRDIPDDVDDMAITQAIIAMAHSLQIK 1069 Query: 1060 TIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 +A V + L G D I G + ++ V Sbjct: 1070 VVAEGVETQEQLAFLKKQGCDQIQGFLFSEPLHSHDFVR 1108 >UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H367_METFK Length = 1070 Score = 1094 bits (2830), Expect = 0.0, Method: Composition-based stats. Identities = 219/1061 (20%), Positives = 423/1061 (39%), Gaps = 49/1061 (4%) Query: 64 MWPGIALSCSLGNIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQNLAD 123 M PG+ L A ++ ++ N+ A +G LL++ + + + L D Sbjct: 1 MLPGLLLGAVATQYTAGLVFPAS----FLIGCGNVASAALGYYLLKRFIRFEPEMTRLRD 56 Query: 124 WLRLALGSAIVPPLLGG------VLVVLLTPGDDPLRAFLIWVLSESIGALALVPLGLLF 177 + + L A++ PLL + + + P D +L W + +++G + L P L Sbjct: 57 LMGMVLVGAVISPLLSATSGALGLRLFGVVPDSDLHVTWLQWWMGDALGIILLTPAILAC 116 Query: 178 KPHYLLRHRNPRLLFESLLTLAITLTLSWLSM-------LYLPWPFTFIIVLLMWSAVRL 230 + +R + L E++ ++ L L +L+ L + L++W+ + Sbjct: 117 FHYEPIRWTRAK-LLEAVSLASMLLGLCFLAFNDLLSQAGELEAKAFLVFPLVIWAVLSF 175 Query: 231 PRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAF 290 + A L VM + + W+ L+ + ++ + Sbjct: 176 HQRGAAAASLLIVMTALWGGGGYHGFFSMEISNAALFNYWMFALVTVSIGVGLSGLHVGR 235 Query: 291 RAERKHISESETHFRNAMEY---SAIGMALVGTEGQWLQTNKALCQFLGYSQEEL-RGLT 346 + + + + + G+ ++ +G+ + N+A+ + GY ++ G + Sbjct: 236 LQADERLRQQLGLYNALSNAQSDAGEGVMVI-EDGKIIYANEAVRKIGGYDARDISMGSS 294 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 F L P D + Q ++ I GE E ++ G + +A + R Sbjct: 295 FLSLIHPSDRERVAQHYKQRIRGEYTPSRYEALAISKLGKPIPIEVAAANYRDGSERI-- 352 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIP- 465 + I DI+ K+ E+ Q E+ +W + + L P Sbjct: 353 -VVLIIDISSRKQAEEALLQSRAEYRKLVESVKAVVWRATPEAAFTFVSQEAESLLGYPV 411 Query: 466 PHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVL 524 N W + + P+DR + LE+R+ DG ++ + + Sbjct: 412 REWTSNTSFWVDKLHPDDRPWVVDFCARETRQLKDHVLEYRMRAADGRTVWLQDIVRVIP 471 Query: 525 NKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVA 584 ++ G+ + L G+ +D+T+ K E+L K+ D+ EA++ D I +N Sbjct: 472 DRFGKPQELFGVMLDITDRKAAEESLNLSKQ----VFDNTSEAILIADRDRNILEVNQAY 527 Query: 585 EKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDV 644 M+G+ +E+ +G L + G + I + +++ RSG Y Sbjct: 528 LDMTGYGREDCVGTYLALLDEPAGGG-----QLIGNLVQQHGKWMGELLAQKRSGEYYPA 582 Query: 645 HYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILL 704 SI+ + GS V+V+ D+++ ++ +L + A+HD LT L NR ++++ + + Sbjct: 583 WVSISTVHDNHGSLQNYVVVLTDISQRKQAEERLQFLATHDGLTGLPNRTLLQERMELAV 642 Query: 705 QTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDE 764 Q ++FIDLDRFK +ND+ GH AGD LL+E+A + LR +D +AR GGDE Sbjct: 643 LRAQRYQQCVGVLFIDLDRFKIINDTLGHQAGDVLLQEVAGRLGECLRQTDTIARQGGDE 702 Query: 765 FGLLLPD-CNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMS 823 F +L+ D + +A +I+ A+ FI + + AS GI++ D+ + ++ Sbjct: 703 FVVLVEDFIEQQYLVNVARKIMHALAQ-PFILMQQELYISASIGISVYPDDGVDISSLLK 761 Query: 824 QADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRI 883 AD+A Y +K+ G+ Y A R + + R ++ N+ +L + Sbjct: 762 NADMAMYRAKDDGKNTFHFYSADGNANSVSRLTLENSLR-RALERNEFSLLYQAKLD--L 818 Query: 884 PEARNLWLISLKLWSC-EGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV--AS 940 E + +L W E ++ Q F + + + V + + A A Sbjct: 819 AEQNIIGAEALIRWHSAELGMVSPQDFIPVAEETGMIIEIGEWVLQQACRDACHWQEVAG 878 Query: 941 KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKL 996 + I + + +S +L + LE S L P L L I I+ +AE +Q Sbjct: 879 RPIRVGVNISARQFREDSLYQAISNALEESGLTPNCLELEITESMIMQNAERASQMLQHF 938 Query: 997 RLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRL 1056 R G +++ G LK D L +D ++ + D + I A L Sbjct: 939 RNLGSYVLIDDFGTGYSSLGYLKHFPIDSLKIDRSFVRDIPQDSDDMAITQAIIAMAHSL 998 Query: 1057 GMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 + +A V ++ L G G D + G + + ++ V Sbjct: 999 KINVVAEGVETQAQLEFLRGQGCDQLQGYIFSRPLVVEDFV 1039 >UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Q1_9PROT Length = 1135 Score = 1031 bits (2666), Expect = 0.0, Method: Composition-based stats. Identities = 172/886 (19%), Positives = 325/886 (36%), Gaps = 36/886 (4%) Query: 225 WSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMT 284 +A R R+ F + +L + + L I L A Sbjct: 260 LTAFRASRLYPFAVLTHIDRTRALQKW-------QAEAKTLLAVVIPVLLAISLLAMAFY 312 Query: 285 MVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRG 344 + A+R+ + + SA + + + N A Q GYS E++ G Sbjct: 313 RRLAQNEAQRREAERLQRINATVFDSSAEAIIITDLNANIISVNPAFTQITGYSPEDVLG 372 Query: 345 LTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTP 404 + L+ + +++ + + N + E ++NG + L++S R G Sbjct: 373 KNPRILSSGQQSKGFYRELWEALL-RDNFWQGELVNRHKNGSLYNIHLSISASRDGTGQL 431 Query: 405 LYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI 464 +FI DI E K+ E + E+ + GI + NI + Sbjct: 432 QHFIGVTTDITERKQHESELRMESEKNMVLLRNASDGIHILDPDGNIIEASDSFCSMLGY 491 Query: 465 PPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVL 524 + V D K+ RD ++ + E R KDG ++ L Sbjct: 492 QRNEMLGMNVCQWDADFSD-PRIVKLFRDQFTNKGRTQFETRHRRKDGTVIDVEISGYPL 550 Query: 525 NKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVA 584 G+ L + D+TE K++ + + + E ++ D I +N Sbjct: 551 QLHGKPA-LFNSSRDITERKKIEVEI----QIAATAFE-AQEGMLITDADRNILRVNRAF 604 Query: 585 EKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDV 644 ++G++ EE +G + + + +++ + A + ++ ++G Y Sbjct: 605 TDITGYSAEEVIGKNPRIL--SSGLHDSHFYAAMWNTLVATGAWKGEIWNKRKNGEVYPE 662 Query: 645 HYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILL 704 +IT + G I V + D+T + ++ A D LT L NR +L+ L Sbjct: 663 RLAITAVKDARGVVINYVASLSDITLHKAAEDEIRSLAFFDPLTGLPNRRLLMDRLQQAL 722 Query: 705 QTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDE 764 + + + AL+F+DLD FK +ND+ GH GD LL+++A + + +R D +AR+GGDE Sbjct: 723 VASSRSGKAGALLFLDLDNFKNLNDTLGHDIGDLLLQQVAQRLKNCVREGDTVARIGGDE 782 Query: 765 FGLLLPDCNVE------SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQA 818 F ++L D + E + +IIS +N + E S G TL D Sbjct: 783 FVVMLEDLSAESIEAASQTEAVGWKIISTLNK-PYHLEKFEVHSTPSIGATLFDSRPQII 841 Query: 819 AEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGV 878 ++ QADIA Y +K GR + ++PQ + R A+ D + I+ + + Sbjct: 842 DDLFKQADIAMYQAKKAGRNTMRFFDPQMQDTLNTRTALEADLRKS-IERREFNLFYQIQ 900 Query: 879 ASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA 937 R + +L W + ++ F + L + V E Q Sbjct: 901 VD---EMNRPVGAEALIRWIHPKRGMVSPAEFIPLAEETDLILNIGLWVLQEACAQLKTW 957 Query: 938 VASK---GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES-- 992 + + +++ +S + + +E + P L L + + ++ E Sbjct: 958 QNNPLTRNLVLAVNVSAKQFRQSDFATQVRVFVEKYAIDPSKLKLELTESMLQENIEDTI 1017 Query: 993 --VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQ 1050 + L+ G + L G +K + L +D ++ + D+ ++ I Sbjct: 1018 LIMNALKEIGVQFSLDDFGTGYSSLQYIKKLPLNQLKIDQSFVHDLDFDRDDKAIVRAII 1077 Query: 1051 GHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 A+ L + IA V L G G + + P+ Sbjct: 1078 AMAKSLQLDVIAEGVETQEQRQLLLNKGCTHFQGYLFSKPLPIREF 1123 >UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3L4_9PROT Length = 900 Score = 1024 bits (2648), Expect = 0.0, Method: Composition-based stats. Identities = 180/898 (20%), Positives = 345/898 (38%), Gaps = 44/898 (4%) Query: 227 AVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMT-- 284 A+RL + A L + + + + T L + F +++ + ++ Sbjct: 8 ALRLALIYAAFGLLWISLSDRFL-----ASVITDSASLTKFQTYKGFCYVVITSALVYFL 62 Query: 285 --MVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEEL 342 M + + +SE ++ A+E + G+ + +K + +GY++ E Sbjct: 63 AKQTMKQNFLTEEKLHDSEERWKFALEGAGDGVWDWNPQTDEAFFSKRWNEIIGYTEHEF 122 Query: 343 --RGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLV-RH 399 G + P+D ++ L ++ ++ Y +E R ++G W L LV R Sbjct: 123 PATGSAWVAHLHPDDKDRVLSVIQGYLTDSREIYDVEYRIRCKDGSWKWILARGMLVSRD 182 Query: 400 TDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMF 459 G PL I DI + K E++ + +E+ + IG+ K I ++ + Sbjct: 183 VYGKPLRMIGTHSDITQRKVDEELVLKNLEKWKKLFDILPIGVSIVNSKNGIVDFNPSLE 242 Query: 460 ELYEIPPHIKPNWQVWYECVLPEDRQHAEK----VIRDSLQSRSPFKLEFRITVKDGIRH 515 + I L D H + +R + R + + + G Sbjct: 243 AILGISKEGLLQGDYDNWEYLRTDNTHMDADEFPSLRAIKEQRVVKDVVIGVKKESGDII 302 Query: 516 IRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAM 575 +++ L+ + + + D+T+ KQ L + E ++ D Sbjct: 303 WTSVSAAPLSYDSNSC--VTVTTDITKRKQFESELRVS----ATAFE-TQEGILITDENN 355 Query: 576 KITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLH 635 + N ++G+T +EA+G + + N ++ A + E ++ Sbjct: 356 VMLRTNAAFTAITGYTNKEAIGQNPRLL--SSGRQNASFYSAMWKAINTTGVWEGEIWNR 413 Query: 636 CRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRAS 695 ++G Y H ++T + +G V V+ D+T+ + ++ A D LT L NR Sbjct: 414 RKNGEIYPEHLTVTAVKDRNGMVTNYVGVLSDLTQRKAAEEKIENLAFFDPLTKLPNRRL 473 Query: 696 FEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSD 755 +L+ + + + A++FIDLD FKA+ND+ GH GD LL+++A ++S +R D Sbjct: 474 LLDRLKQAMASATRSVTNGAVLFIDLDNFKALNDTYGHPMGDLLLQQVAKRLVSSVRDGD 533 Query: 756 VLARLGGDEFGLLLPDCNVE------SARFIATRIISAVNDYHFIWEGRVHRVGASAGIT 809 ++R GGDEF +LL + A + +I +A+ ++ + +S G T Sbjct: 534 TVSRFGGDEFVVLLEGFDENPLDAASQAETVGEQIFAALRQ-PYLIGTHEYHGTSSIGAT 592 Query: 810 LIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKEN 869 L +D E+M QADIA Y +K GR + ++PQ ++R A+ D + + I+ + Sbjct: 593 LFNDKQQSIDELMKQADIAMYQAKKEGRNVLRFFDPQMQETIAKRTALEGDLR-KAIENH 651 Query: 870 QLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFH 928 Q + +L W E ++ F + L + V Sbjct: 652 QFQLHYQIQVD---ESRHPFGAEALIRWFHPEHGMVSPDQFIPLAEESDLILPIGYWVLE 708 Query: 929 EFFQQAAKAVASK---GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEA 985 + + G +S+ +S VN + ++ + P LL L + Sbjct: 709 TACARIQRWQHDAKTSGFVLSVNVSAKQFRQTDFVNQVQSLIQQYEINPSLLKLELTESM 768 Query: 986 ILDHAE----SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLM 1041 +LD+ E ++ L+ G + L G LK D L +D ++ + Sbjct: 769 LLDNIEDTIATMSALKELGVKFSLDDFGTGYSSLQYLKRLPLDQLKIDQSFVRDIAVDAS 828 Query: 1042 DEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNS 1099 D ++ I A L + IA V LS G G + P++ S Sbjct: 829 DRAIVRTIIAMAHSLDLDVIAEGVETEEQQKHLSSKGCKNFQGYLFGKPVPIEQFETS 886 >UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V1H2_9PROT Length = 1134 Score = 1010 bits (2613), Expect = 0.0, Method: Composition-based stats. Identities = 179/823 (21%), Positives = 325/823 (39%), Gaps = 32/823 (3%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 ERK + E + A +Y+ + V + + N+A G+S+EEL +T L Sbjct: 321 TERKKMEERLELTQFASDYAPDCILWVNEQARICYANEAALHCHGFSKEELLSMTIHDL- 379 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 P+ + + ++E R+ R+G + ++ + V+ D Y IA Sbjct: 380 DPDFPPDVWLAHWHELQHKGGI-TIETRHRRRDGSIFPIEVSANFVKFGDKE--YNIAYH 436 Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPN 471 DI E K++E + +R+ +EA G +WE ++ R E+ P Sbjct: 437 RDITERKKSEAALRYSEQRLRDVSEASGEYLWEIDINLGYTYVSNRSIEVKGYTPEQLLG 496 Query: 472 WQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFR-ITVKDGIRHIRALANRVLNKEGEV 530 E + PED A +++ ++ PFKL+ R IT I + G + Sbjct: 497 HAP-AEFMPPEDIDMAARIVNLAISKNQPFKLQHRDITPSGAILWEEVSGVPFYDDAGHL 555 Query: 531 ERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGW 590 L G ++T K E L + EA++ D I +N ++++G+ Sbjct: 556 LGLRGTGRNITGRKLKEEQL----RVAAAAFE-THEAIMITDAHGTIIKVNQAFQRITGY 610 Query: 591 TQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITP 650 +QEE LG + + ++ T+ ++ +SG Y +IT Sbjct: 611 SQEEVLGENPRIL--SAGRNEKSFYSAMWQQLTTLGRWRGEIWDKRKSGQIYPKWMTITA 668 Query: 651 LSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNST 710 + +G V + D+T+ + ++ A +DALT L NR +L L + Sbjct: 669 VRDENGKTTEYVAIFSDITQRKLAEEEIRNLAFYDALTRLPNRRLLLDRLHAALSVSARS 728 Query: 711 HQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLP 770 + A++F+D+DRFK +ND+ GH GD LL E+A + +R D +ARLGGDEF +L+ Sbjct: 729 RRFGAVLFLDMDRFKTLNDTMGHDYGDLLLIEVAERIKLCVREIDTVARLGGDEFVILVE 788 Query: 771 DCNVE------SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQ 824 + + IA +I SA++ + + + H S G+ L +++ Sbjct: 789 EIDTRAEETSKHIAAIAEKIRSALS-VPYRLKEKHHHSSPSIGVCLYRGIEESTDDLLKH 847 Query: 825 ADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIP 884 AD+A Y +K+ GR V ++P A R + D + + +QL + Sbjct: 848 ADMAMYQAKDSGRNAVRFFDPLMQQAVEARVTLENDLR-HALPNDQLQLYYQIQVD---N 903 Query: 885 EARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK-- 941 + R + +L W ++ F + +L + V Q A Sbjct: 904 DRRAIGAEALVRWIHPIRGMVSPAHFIPIAEETSLILEVGAWVLKTACLQLAVWADRPMT 963 Query: 942 -GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH----AESVQKL 996 + +++ +SV V + E + + P+ L L + +L+ + + L Sbjct: 964 CNLILAVNVSVQQFKQVGFVEHIAELIRAYCIVPQRLKLELTESVVLNDVSDIVQKMCAL 1023 Query: 997 RLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRL 1056 + G R+ + G + LK D L +D N+ + D +++ I AQ Sbjct: 1024 KSLGVRLSMDDFGTGYSSLSYLKNLPLDQLKIDQSFVRNIATDENDAVMVKTIIAMAQNF 1083 Query: 1057 GMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNS 1099 + IA V + L G G P++ + Sbjct: 1084 RLNVIAEGVETEAQLAFLKQNGCMCYQGYYFGKPAPIEQFQSQ 1126 Score = 222 bits (566), Expect = 7e-56, Method: Composition-based stats. Identities = 60/390 (15%), Positives = 130/390 (33%), Gaps = 21/390 (5%) Query: 301 ETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDL 360 E R + L +G +L N + + LG ++ + G T E + Sbjct: 73 EARLRTLFNTIKDLVWLKAPDGVYLACNPVVERMLGTAEAAIVGRTDYDFISREQADSFR 132 Query: 361 QQVEKLISGEINTYSMEKRYYNRN-GDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKR 419 + ++ + E ++ G + + V G + DI E KR Sbjct: 133 EHDRAAMNTGTVCIN-EGWLTFKDTGYCGLFETSKTPVYDDTGQLIGVFGIARDITERKR 191 Query: 420 TEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVW---Y 476 E + ++ + +G+ + I ++ +L + + + Sbjct: 192 AEAALKNSEQQARNLIDKLQVGVLLQSARAEILLCNQIALDLLGLSEAQLLGKSSFDPDW 251 Query: 477 ECVLPEDRQH------AEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEV 530 + + I +R + +D + + A LN EV Sbjct: 252 NVIHEDGSPFPGSEHPVPVSIATKSLVHDVVMGVYRPSKRDRV-WLLVSAAPQLNPNNEV 310 Query: 531 ERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGW 590 E+++ +D+TE K++ E L E D + ++ ++ +I + N A G+ Sbjct: 311 EQVVCTFVDITERKKMEERL----ELTQFASDYAPDCILWVNEQARICYANEAALHCHGF 366 Query: 591 TQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITP 650 ++EE L + + + D + + + I + R G + + S Sbjct: 367 SKEELLSMTIHDLDPDFPPD---VWLAHWHELQHKGGITIETRHRRRDGSIFPIEVSANF 423 Query: 651 LSTLDGSNIGSVLVIQDVTESRKMLRQLSY 680 + G ++ +D+TE +K L Y Sbjct: 424 VKF--GDKEYNIAYHRDITERKKSEAALRY 451 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 69/411 (16%), Positives = 146/411 (35%), Gaps = 18/411 (4%) Query: 277 LLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLG 336 L+ + + + + SE RN ++ +G+ L + L N+ LG Sbjct: 176 LIGVFGIARDITERKRAEAALKNSEQQARNLIDKLQVGVLLQSARAEILLCNQIALDLLG 235 Query: 337 YSQEELRGLTFQQ----LTWPEDLNKDLQQVEKL---ISGEINTYSMEKRYYNRNGD-VV 388 S+ +L G + + ED + + I+ + + + Y + V Sbjct: 236 LSEAQLLGKSSFDPDWNVIH-EDGSPFPGSEHPVPVSIATKSLVHDVVMGVYRPSKRDRV 294 Query: 389 WALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELK 448 W L++ + + + + DI E K+ E+ + A++ I + Sbjct: 295 WLLVSAAPQLNPNNEVEQVVCTFVDITERKKMEERLELT----QFASDYAPDCILWVNEQ 350 Query: 449 PNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRIT 508 I ++ + + + + P+ LQ + +E R Sbjct: 351 ARICYANEAALHCHGFSKEELLSMTIHD--LDPDFPPDVWLAHWHELQHKGGITIETRHR 408 Query: 509 VKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAV 568 +DG ++ + K G+ E + + D+TE K+ AL ++RL ++ GE + Sbjct: 409 RRDGSIFPIEVSANFV-KFGDKEYNIAYHRDITERKKSEAALRYSEQRLRDVSEASGEYL 467 Query: 569 VCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAI 628 ID+ + T+++ + ++ G+T E+ LG + D + N+ A + Sbjct: 468 WEIDINLGYTYVSNRSIEVKGYTPEQLLGHAPAEFMPPEDIDMAARIVNL--AISKNQPF 525 Query: 629 EQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLS 679 + SG S P G +G +++T + QL Sbjct: 526 KLQHRDITPSGAILWEEVSGVPFYDDAGHLLGLRGTGRNITGRKLKEEQLR 576 Score = 156 bits (396), Expect = 4e-36, Method: Composition-based stats. Identities = 36/267 (13%), Positives = 83/267 (31%), Gaps = 8/267 (2%) Query: 285 MVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRG 344 + + + SE R+ E S + + + + + GY+ E+L G Sbjct: 437 RDITERKKSEAALRYSEQRLRDVSEASGEYLWEIDINLGYTYVSNRSIEVKGYTPEQLLG 496 Query: 345 LTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTP 404 + PED++ + V IS + + ++ R +G ++W ++ G Sbjct: 497 HAPAEFMPPEDIDMAARIVNLAIS-KNQPFKLQHRDITPSGAILWEEVSGVPFYDDAGHL 555 Query: 405 LYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI 464 L +I K E+ + I + I ++ + Sbjct: 556 LGLRGTGRNITGRKLKEEQLRVAAAAFE-----THEAIMITDAHGTIIKVNQAFQRITGY 610 Query: 465 PPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANR-V 523 ++ + + ++ E K G + + + V Sbjct: 611 SQEEVLGENPRILSAGRNEKSFYSAMWQQLTTLGR-WRGEIWDKRKSGQIYPKWMTITAV 669 Query: 524 LNKEGEVERLLGINMDMTEVKQLNEAL 550 ++ G+ + I D+T+ K E + Sbjct: 670 RDENGKTTEYVAIFSDITQRKLAEEEI 696 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 33/259 (12%), Positives = 88/259 (33%), Gaps = 9/259 (3%) Query: 265 MSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQW 324 +S +P+ LL + + + + + + A E + + + G Sbjct: 543 VSGVPFYDDAGHLLGLRGTGRNITGRKLKEEQLRVA----AAAFE-THEAIMITDAHGTI 597 Query: 325 LQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRN 384 ++ N+A + GYSQEE+ G + L+ + + + ++ + + E ++ Sbjct: 598 IKVNQAFQRITGYSQEEVLGENPRILSAGRNEKSFYSAMWQQLT-TLGRWRGEIWDKRKS 656 Query: 385 GDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWE 444 G + + ++ VR +G ++A DI + K E+ + L L + Sbjct: 657 GQIYPKWMTITAVRDENGKTTEYVAIFSDITQRKLAEEEIRNLAFYDALTRLPNRRLL-- 714 Query: 445 WELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSR-SPFKL 503 + S R + ++ + + + + + ++ Sbjct: 715 LDRLHAALSVSARSRRFGAVLFLDMDRFKTLNDTMGHDYGDLLLIEVAERIKLCVREIDT 774 Query: 504 EFRITVKDGIRHIRALANR 522 R+ + + + + R Sbjct: 775 VARLGGDEFVILVEEIDTR 793 >UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q39R25_GEOMG Length = 905 Score = 1001 bits (2589), Expect = 0.0, Method: Composition-based stats. Identities = 183/905 (20%), Positives = 336/905 (37%), Gaps = 51/905 (5%) Query: 210 LYLPWPFTFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMP 269 YLP P ++ LL+ V + V++ P ++ L+ + Sbjct: 12 RYLPSPKKQLLALLLIVFV--------IELFLMVLLPRTADGGTPLAISLLDALLLVILS 63 Query: 270 WLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNK 329 L ++ + + +++ A G+ G+ L N Sbjct: 64 APIIWLSIVRPLRSVAFTASLHTD------------LLLDHIADGIISFDGAGRLLSLNP 111 Query: 330 ALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLIS--GEINTYSMEKRYYNRNGDV 387 A Q GY E G + + KD + L+ E + + E +G Sbjct: 112 AAEQLFGYQSAEATGRSLGDILAIRSTGKDNPLLTPLVCCGEEHSRLTCEAEGIRSDGSR 171 Query: 388 VWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWEL 447 A L++S V+ +F+ + D+ E + T + ++ E++ +A GI + Sbjct: 172 FPAALSLSRVQMKG--VWHFLGIVRDVTESRETGERLRETNEKLDTLIQASPQGIVAVDC 229 Query: 448 KPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPF-KLEFR 506 + W++ E++ V P +R + +R+ + +E R Sbjct: 230 GGKVTLWNRAAVEIFGWSAEEVLGKPYP---VAPAERAAEHRKLRELVLQGKRITDVELR 286 Query: 507 ITVKDGIRH-IRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIG 565 KDG + A + + G ++ I D++ K+ + L L ++S Sbjct: 287 RRRKDGSPIDVSLSAAPICDGSGTPLGVITIISDISARKRNEQELV----LLKRAMESSI 342 Query: 566 EAVVCIDM---AMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSAD 622 + D I ++NP E+++G+ +E + + + ++ + A Sbjct: 343 NGITITDATHPDNPIIYVNPAFERITGYGVDEVIDKNPRFLRG--DDRDQAELKKLVQAF 400 Query: 623 TSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSA 682 + + + G + I P+ DG + V+ D+TE R+ QL Y A Sbjct: 401 KEEREGCFVLRNYRKDGSPFWNELFIAPVRDRDGVVTNYIGVMNDITEHRRYEEQLVYQA 460 Query: 683 SHDALTHLANRASFEKQLRILLQ-TVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLR 741 +HD LT L NR + +L L ++F+DLD FK VND+ GH GD LL+ Sbjct: 461 THDPLTGLPNRNLLQDRLGQALALEAFRRRNPICVMFLDLDNFKKVNDTLGHTVGDMLLK 520 Query: 742 ELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVH 800 +A+ + + LR D +ARLGGDE+ ++LP+ V +A ++I+ + G Sbjct: 521 AVANRLKNCLRGGDTVARLGGDEYIIVLPNVREVPDVITVAKKMINVFAA-PLLLMGNEI 579 Query: 801 RVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLD 860 V AS GI L + ++ AD A Y +K G+ Y + ER ++ Sbjct: 580 YVTASIGIALFPTDGETVDALLKNADAAMYHAKEQGKNNYQFYSAEMNIRVFERLSLETS 639 Query: 861 EQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALS 919 R +K + ++ R R + +L W E ++ F + L Sbjct: 640 L-HRAVKNQEFLLHYQPRVDLR--NGRICGVEALVRWNHPEMGLVSPAKFIPLAEETGLI 696 Query: 920 HALDRRVFHEFFQQAAKAV--ASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLL 977 + V Q + +++ LS L+ + E L + L P+ L Sbjct: 697 VPMGEWVLRTACAQNKAWQDAGLPPLRMAVNLSARQFRQENLIAMVEEILMETGLAPQWL 756 Query: 978 HLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELC 1033 L + ++ AE +++L G + + G + LK L +D Sbjct: 757 ELELTESLVMQEAEKSAAILRELTDRGIEVAIDDFGTGYSSLSYLKRFPIANLKIDQAFI 816 Query: 1034 ANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPL 1093 ++ + D L+ I A LGMKTIA V L +D L + + G + Sbjct: 817 RDMTRDPDDATLVKTIITMAHGLGMKTIAEGVELAEQIDFLCRHQCEEMQGYYFSRPITA 876 Query: 1094 DLLVN 1098 + L Sbjct: 877 EELGR 881 >UniRef50_A1SU67 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Alteromonadales RepID=A1SU67_PSYIN Length = 1014 Score = 1001 bits (2588), Expect = 0.0, Method: Composition-based stats. Identities = 221/1023 (21%), Positives = 408/1023 (39%), Gaps = 44/1023 (4%) Query: 94 TTINIVEAVVGAVLLRKLLPWYNPLQNLADWLRLALGSAIVPPLLGGVLVVLLTPGDDP- 152 + + A+LL + L ++++LTP + Sbjct: 5 SFGLLTLTQNAALLLAMFFIYDMAAFRNRTVFGFYWAIFTGIALGLIGIIIMLTPWEYAP 64 Query: 153 -----LRAFLIWVLSESIGALALVPLGLLFKPHYLLRHRNPRLLFESLLTLAITLTLSWL 207 RA L+ + G + + ++ L + ++ ++ + TL ++W Sbjct: 65 GIIVDSRAVLLGISGLFFGTIPTLIAMVITATLRLFQGGGAAVIGVLVIITSGTLGIAWR 124 Query: 208 SMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSH 267 Y P P S + + F + + VM+ + LA + Sbjct: 125 Y--YRPHP---------LSELSFREIYLFGVIIHGVMLALTFIFPWEMTLAVLSNISLPV 173 Query: 268 MPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQT 327 + P + LL + + + ESE FR+ + +IG+A+ WL+ Sbjct: 174 LLLYPLITALLGMLFVQRL--RRNQSTDALKESEFLFRSQFDLGSIGIAITYPGKGWLRV 231 Query: 328 NKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDV 387 N LC+ LGY +EEL L + +LT P+D + DL Q +++++GE + YS++KR+ ++G+ Sbjct: 232 NPRLCEILGYREEELLLLNWSELTHPDDRHLDLYQYDQMLTGEEDGYSLDKRFIRKDGES 291 Query: 388 VWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWEL 447 V+ + +S R DG + IA I D +E K E + E++ +G W+W + Sbjct: 292 VYVHMTISCYR-VDGAVQFVIAGILDSSERKHAEDKIRGRKEQLLSVLSGSELGFWDWNI 350 Query: 448 KPNIFSWDKRMFELYEIPPHIKPNWQVWY-ECVLPEDRQHAEKVIRDSLQSRSPFK-LEF 505 + N + R E+ N + V P D + + D L+ R+ +E+ Sbjct: 351 EANTVHRNARWAEMLGYRFEDIQNDTSINLDSVHPNDCGRVWQSVTDHLEGRTAQHKIEY 410 Query: 506 RITVKDGIRHIRALANRVLN--KEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDS 563 R+ + G +++N ++ + R+ G + D+T+ K E + + + Sbjct: 411 RMRTRQGEYKWILDCAKIVNYGEDQQPLRMSGTHTDITKRKLAEE----SMQLASMVYQN 466 Query: 564 IGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADT 623 EA+ D I NP +M+G++ +E G ++ + + + + + A Sbjct: 467 SREAMTVTDSNGNIITTNPAFTEMTGYSADEITGKSHTFIV--SKQQDKRVYQRMELALN 524 Query: 624 SRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSAS 683 S +V ++G +Y I + D S V D+TE +K + + A+ Sbjct: 525 STGHWRGEVSCRHKNGENYMALLGINSIYNEDRSVHRRVAQFSDITERKKSEKIIWKQAN 584 Query: 684 HDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLREL 743 D LT L+NR F QL L+F+DLDRFKAVND+ GH GD LL ++ Sbjct: 585 FDNLTGLSNRQMFHDQLLHEKNKAQRRGLNVGLLFLDLDRFKAVNDTLGHNMGDQLLIDV 644 Query: 744 ASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRV 802 A + + +R D+++R GGDEF +++ N +S +A +I+ + + F+ + + Sbjct: 645 AQRLRNCVRKRDLVSRFGGDEFTVIIGGLKNTQSVERVAQKILCELAE-PFLLGEQNVYI 703 Query: 803 GASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQ 862 S GIT + ++ AD A Y++K GR + ++ D + Sbjct: 704 TPSIGITFYPKDGEATEMLLKNADQAMYSAKEKGRNCYHYFTNSMQEQVERGGQLANDLR 763 Query: 863 WRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHA 921 + +K+NQL + + + + + +L W E ++ F + Sbjct: 764 Y-ALKKNQLELYYQPIVA--LGTGQIRKAEALIRWHHPELGMVSPAEFIPIAEETGTIVE 820 Query: 922 LDRRVFHEFFQQAAKAVA--SKGISISLPLSVAGLSSATL-VNDLLEQLENSPLPPRLLH 978 + VF + Q A +S+ S + LE L LP + + Sbjct: 821 IGDWVFRQAADQVAHWRREYQNDFQVSINKSPVQFREGGSDITSWLEHLLALGLPGQAVV 880 Query: 979 LIIPAEAILDH-----AESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELC 1033 + I +LD + + R +G + L G + L+ D L +D Sbjct: 881 IEITEGLLLDGSSRIVIDKLLAFRDSGIEVSLDDFGTGYSSMSYLRKFHIDNLKIDQSFV 940 Query: 1034 ANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPL 1093 N++ + D +L I A +LGM+ IA + LS G D G + A P Sbjct: 941 RNLKVDSDDMILCEAIIIMAHKLGMQVIAEGIENEEQRRLLSAAGCDYGQGYLFAKPLPE 1000 Query: 1094 DLL 1096 Sbjct: 1001 KDF 1003 >UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q47GC0_DECAR Length = 862 Score = 997 bits (2578), Expect = 0.0, Method: Composition-based stats. Identities = 172/844 (20%), Positives = 317/844 (37%), Gaps = 58/844 (6%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 + + SE + + + + + G N+ + + LGY EL G + + L Sbjct: 11 RLEQALRTSEARLHSFFDATPDALLISDAHGTITMANQQVEKLLGYVAAELVGKSIEDLV 70 Query: 352 -------WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTP 404 P ++ G ++G +++S + +G Sbjct: 71 PNRFKASHPVLRSEFTASPRARRMGNGMAVKA----RRKDGSECDVDVSLSRIETDEG-- 124 Query: 405 LYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI 464 ++F + + DI+E KR E+ ++ ++ ++ GI ++ + +++ + L ++ Sbjct: 125 MFFASALRDISERKRKEEELRRQNGVLSTIFQSFPGGITLFDADLRLVAFNDQFKALLDL 184 Query: 465 PP----------HIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIR 514 P + P D + I + P K+E R+ Sbjct: 185 PDVLFEQPEPDFETLIRYNAARGEYGPGDPEQQVAAIIARTKKFVPHKIE-RVRPDGTSL 243 Query: 515 HIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMA 574 IR V G L I D+T+ KQ E L + ++ D Sbjct: 244 SIRG----VPLASG---GFLSIYTDITDRKQSEEQL----RIAAAAFE-SQTCMIITDAN 291 Query: 575 MKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVL 634 I +N + +G++ EEA+G + + ++ A + ++ Sbjct: 292 RVIQRVNRAFIETTGYSAEEAVGQTPRLLQ--SGRHGADFYREMWETIHRTGAWQGEIWG 349 Query: 635 HCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRA 694 ++G Y SI+ + +G + D+TE +K +++ A D LT L NR Sbjct: 350 RRKNGEVYPKWLSISAVVGTNGRVSHYIGTHNDITERKKAEERINALAFFDQLTGLPNRT 409 Query: 695 SFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSS 754 +L+ + + + AL+FIDLD FK +ND+ GH GD LL+++A + +R Sbjct: 410 LLLDRLKQTILSSGRSDSHGALLFIDLDNFKTLNDTLGHDVGDQLLKQVALRLTHCVRDG 469 Query: 755 DVLARLGGDEFGLLLPDCN------VESARFIATRIISAVNDYHFIWEGRVHRVGASAGI 808 D +ARLGGDEF ++L + N + +A +I++ +N + H AS G Sbjct: 470 DTVARLGGDEFVVVLANLNTNDKEAAQDTETVAEKILATLNQT-YQLGHVTHHSSASIGA 528 Query: 809 TLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKE 868 TL ++M QAD++ Y +K GR V ++P A RA M D R + E Sbjct: 529 TLFKGPLIPIDDLMKQADLSMYKAKAAGRNAVRFFDPSMEIAVKVRAEMEDDLL-RALAE 587 Query: 869 NQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVF 927 Q ++ R L W + ++ F + L L V Sbjct: 588 KQFLLHYQAQMVGE----RLTGAEVLLRWQHPQRGMVSPAEFIPLAEETGLILPLGHWVL 643 Query: 928 HEFFQQAAKAVASK---GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAE 984 Q A+ +++++ +S V+ +L LE + P+ L L + Sbjct: 644 ETACTQLAQWAGRPEVAHLTLAVNVSAHQFRQNDFVDQVLGVLEKTGANPQRLKLELTES 703 Query: 985 AILDHAE----SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNL 1040 ++++ E + L+ G L G + LK D+L +D +V + Sbjct: 704 LLVENVEDIIDKMAALKHRGVGFSLDDFGTGYSSLSYLKRLPLDHLKIDQSFVRDVLTDS 763 Query: 1041 MDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNSS 1100 D + I A LG+ IA V D L+ G G + P++ + + Sbjct: 764 NDASIARTIVALANSLGLGVIAEGVETEAQRDFLASSGCHTYQGYYFSRPLPIEDFESFT 823 Query: 1101 YFAI 1104 AI Sbjct: 824 LTAI 827 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 70/217 (32%), Gaps = 8/217 (3%) Query: 281 NIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQE 340 + + + + + + A E S M + + N+A + GYS E Sbjct: 256 LSIYTDITDRKQSEEQLRIA----AAAFE-SQTCMIITDANRVIQRVNRAFIETTGYSAE 310 Query: 341 ELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHT 400 E G T + L +++ + I + E +NG+V L++S V T Sbjct: 311 EAVGQTPRLLQSGRHGADFYREMWETIH-RTGAWQGEIWGRRKNGEVYPKWLSISAVVGT 369 Query: 401 DGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFE 460 +G ++I DI E K+ E+ L L + + R Sbjct: 370 NGRVSHYIGTHNDITERKKAEERINALAFFDQLTGLPNRTLL--LDRLKQTILSSGRSDS 427 Query: 461 LYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQS 497 + N++ + + + K + L Sbjct: 428 HGALLFIDLDNFKTLNDTLGHDVGDQLLKQVALRLTH 464 Score = 107 bits (268), Expect = 3e-21, Method: Composition-based stats. Identities = 35/281 (12%), Positives = 85/281 (30%), Gaps = 30/281 (10%) Query: 285 MVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQ----- 339 + + + + + + G+ L + + + N L Sbjct: 132 RDISERKRKEEELRRQNGVLSTIFQSFPGGITLFDADLRLVAFNDQFKALLDLPDVLFEQ 191 Query: 340 -----EELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAV 394 E L + + + QQV +I+ + +G L++ Sbjct: 192 PEPDFETLIRYNAARGEYGPGDPE--QQVAAIIARTKKFVPHKIERVRPDGT----SLSI 245 Query: 395 SLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSW 454 V G F++ DI + K++E+ + + + I Sbjct: 246 RGVPLASG---GFLSIYTDITDRKQSEEQLRIAAAAFE-----SQTCMIITDANRVIQRV 297 Query: 455 DKRMFELYEIPPHIKPNW--QVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG 512 ++ E ++ D + + +++ ++ E K+G Sbjct: 298 NRAFIETTGYSAEEAVGQTPRLLQSGRHGAD---FYREMWETIHRTGAWQGEIWGRRKNG 354 Query: 513 IRHIRALA-NRVLNKEGEVERLLGINMDMTEVKQLNEALFQ 552 + + L+ + V+ G V +G + D+TE K+ E + Sbjct: 355 EVYPKWLSISAVVGTNGRVSHYIGTHNDITERKKAEERINA 395 >UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K3A1_AZOSB Length = 818 Score = 996 bits (2577), Expect = 0.0, Method: Composition-based stats. Identities = 166/804 (20%), Positives = 322/804 (40%), Gaps = 18/804 (2%) Query: 301 ETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDL 360 ++ R ++ + G++L N+A + G + EL G T + L + Sbjct: 18 DSLLRALIDVIPDLVFFKDEAGRYLGCNRAFEAYTGRREAELIGYTDRDLFDLSTADSYR 77 Query: 361 QQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRT 420 +++ ++ + E+ +G V + R + D+ + T Sbjct: 78 GYDNAVLASGRSSRN-EEWIVYPDGRRVLVDTLKTPFRDAASGRRGVVGISRDVTVFRET 136 Query: 421 EQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVL 480 + ++ E + A G W + W L+ P P+++++ V Sbjct: 137 AEALRRSQENLERAQAVARTGSWYVDFVSGQMDWSAETCRLFGQAPGCVPSYELFLSVVH 196 Query: 481 PEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDM 540 PED+ E R ++ + L R+ V +R + A +G +G D+ Sbjct: 197 PEDQALVEAAWRQAVARGD-YDLTHRVIVGGEVRWVHERAEFRRAADGAALAGIGTVQDI 255 Query: 541 TEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPL 600 T+ K ++L + ++ GE V+ D +I +N ++G+ EE +G Sbjct: 256 TDRKLAEQSL----RQAATVFENTGEGVIIADAKNRIIAVNRAFTVITGYGPEEVIGRSP 311 Query: 601 LTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIG 660 + + + + ++ + ++ ++G + +++ + +G Sbjct: 312 NLLR--SGRHDAAYYDAMWRGVHEAGHWQGEIWNRRKNGEIFPELLTLSVVRDHNGKVSH 369 Query: 661 SVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFID 720 V V D++ ++ +L A +DALT L NR +L ++ V + + A++F+D Sbjct: 370 YVGVFSDISRMKETEARLQRLAHYDALTDLPNRVLLNLRLAHGVERVQRSGEMLAVLFLD 429 Query: 721 LDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARF 779 +DRFK VNDS GH GD LL E+A + S +R+ D LARLGGDEF +LL + Sbjct: 430 IDRFKNVNDSLGHPVGDELLIEIARRLRSRIRAEDTLARLGGDEFVILLDRIRSANDVAD 489 Query: 780 IATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGR 839 A II +N + G+ VGAS GI+L + A +++S AD A Y +K GR Sbjct: 490 FAQEIIDLLNQSFQLASGQEVFVGASIGISLYPLDTDDATQLISNADAALYQAKEAGRNV 549 Query: 840 VTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-S 898 Y A ER + + R ++ + ++ V + + + + +L W Sbjct: 550 YRFYTADLTRAAHERLGLEAALR-RGLERGEFVLHFQPVVA--LDKGEVVGAEALVRWNH 606 Query: 899 CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVA-SKGISISLPLSVAGLSSA 957 +I F + L L V +Q + + + ++I++ LS + Sbjct: 607 PTEGMIAPLRFIPLAEETGLIVPLGEWVLESACRQGREWLDCGRPLTIAVNLSTRQFRAG 666 Query: 958 TLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQ 1013 L + + L+ + P LL L I +++ A+ + L+ G R+ + G Sbjct: 667 DLTATVRDILDRTGFPAALLELEITESTVMEDADRAVATLAALKGLGVRLSIDDFGTGYS 726 Query: 1014 IFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDT 1073 LK D L +D ++ + D M++ + A ++ + IA V + Sbjct: 727 SLAYLKRFAVDALKIDRSFVRDIADDENDRMIVATVVAMAHQMRLGVIAEGVETAEQLAF 786 Query: 1074 LSGIGVDLIYGEVIADAQPLDLLV 1097 L +G + G ++ Q + Sbjct: 787 LRSLGCEAYQGYLVGRPQAAADFL 810 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 49/365 (13%), Positives = 116/365 (31%), Gaps = 30/365 (8%) Query: 276 ILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFL 335 L + + + + ++ E + G+ + + + + N+A Sbjct: 244 AALAGIGTVQDITDRKLAEQSLRQA----ATVFENTGEGVIIADAKNRIIAVNRAFTVIT 299 Query: 336 GYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVS 395 GY EE+ G + L + + + E + E +NG++ LL +S Sbjct: 300 GYGPEEVIGRSPNLLRSGRHDAAYYDAMWRGVH-EAGHWQGEIWNRRKNGEIFPELLTLS 358 Query: 396 LVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWD 455 +VR +G +++ DI+ +K TE Q+L L + + + L + Sbjct: 359 VVRDHNGKVSHYVGVFSDISRMKETEARLQRLAHYDALTDLPNRV-LLNLRLAHGVERV- 416 Query: 456 KRMFELYEIPPHIKPNWQVWYECV-LPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIR 514 +R E+ + ++ + + P + ++ R R+ + + Sbjct: 417 QRSGEMLAVLFLDIDRFKNVNDSLGHPVGDELLIEIARRLRSRIRAEDTLARLGGDEFVI 476 Query: 515 HIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAV----VC 570 +L++ + ++ ++ + L +E + + Sbjct: 477 --------LLDRIRSANDVADFAQEIIDLLNQSFQLASGQE----VFVGASIGISLYPLD 524 Query: 571 IDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQ 630 D A ++ A + +EA G + + A R Sbjct: 525 TDDATQLISNADAAL----YQAKEA-GRNVYR-FYTADLTRAAHERLGLEAALRRGLERG 578 Query: 631 DVVLH 635 + VLH Sbjct: 579 EFVLH 583 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 49/277 (17%), Positives = 95/277 (34%), Gaps = 18/277 (6%) Query: 282 IMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQE- 340 ++ + FR + + S+ + A + G V + + C+ G + Sbjct: 125 GISRDVTVFRETAEALRRSQENLERAQAVARTGSWYVDFVSGQMDWSAETCRLFGQAPGC 184 Query: 341 ----ELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSL 396 EL F + PED + ++ Y + R G+V W Sbjct: 185 VPSYEL----FLSVVHPEDQALVEAAWRQAVA--RGDYDLTHRVI-VGGEVRWVHERAEF 237 Query: 397 VRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDK 456 R DG L I ++DI + K EQ +Q E G G+ + K I + ++ Sbjct: 238 RRAADGAALAGIGTVQDITDRKLAEQSLRQAA----TVFENTGEGVIIADAKNRIIAVNR 293 Query: 457 RMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHI 516 + P D + + + R ++ ++ E K+G Sbjct: 294 AFTVITGYGPEEVIGRSPNLLRSGRHDAAYYDAMWRGVHEAGH-WQGEIWNRRKNGEIFP 352 Query: 517 RALA-NRVLNKEGEVERLLGINMDMTEVKQLNEALFQ 552 L + V + G+V +G+ D++ +K+ L + Sbjct: 353 ELLTLSVVRDHNGKVSHYVGVFSDISRMKETEARLQR 389 >UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNA9_9PROT Length = 1399 Score = 992 bits (2565), Expect = 0.0, Method: Composition-based stats. Identities = 162/808 (20%), Positives = 316/808 (39%), Gaps = 29/808 (3%) Query: 304 FRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQV 363 A+E S + + + + N + + GYS+ E G + L E + + + Sbjct: 597 LLQAVEQSPVAIVITNRNAEIEYVNPSFTRVTGYSRLEAIGQNPRILQSGEAPSDTYRSL 656 Query: 364 EKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQV 423 + + E ++ +NG++ W +++ + G +++A ED+ E R +++ Sbjct: 657 WQTLL-EGKVWTGLFHNRRKNGELFWEKASIAPIIGDHGEVTHYLAVKEDVTERLRADKL 715 Query: 424 NQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVL--- 480 Q+ E E + + ++ EL + + + Sbjct: 716 LQESEEAFRRLFEDAKDPLLLL-KDGSFIDCNRATLELLGYGSKAQLLGRDAADISPARQ 774 Query: 481 PEDRQHAEKVIRDSLQSRSP--FKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINM 538 P+ + EK + + E+ DG + + GEV L + Sbjct: 775 PDGQASGEKAAALIAAALRIGYHRFEWTHQRADGSPVPVEVTLTPITLRGEVI-LHTLWR 833 Query: 539 DMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGV 598 D++E + L L + EA++ D +I +N +++G+ +E G Sbjct: 834 DISERRVTETRL----RLLAAAFEHSAEAIMVSDRDNRILEVNDAFCRLTGYAADEVRGS 889 Query: 599 PLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSN 658 + + + ++ A S + +V + G Y SI+ + +G+ Sbjct: 890 DPRLL--SSGRTSAEEYRTMWQAINSTGHWQGEVWDRRKDGSYYPKWLSISTIRGAEGNT 947 Query: 659 IGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNS--THQRHAL 716 + D++E + ++S+ A D LT L NR++ + +L L + + A+ Sbjct: 948 EYYIGSFVDISERKAAEEKISHLAHFDTLTDLPNRSNLQGRLDQALASARREGHGRSVAV 1007 Query: 717 VFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVES 776 +F+DLDRFK +ND+ GH GDALL E+A+ + S +R SDV+ARLGGDEF ++L + + Sbjct: 1008 MFLDLDRFKNINDTLGHHVGDALLLEVAARLRSSVRDSDVVARLGGDEFVVVLTGADALA 1067 Query: 777 ARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGG 836 A +A +I+ A++ + EG +S GI + + +M AD A Y +K+ G Sbjct: 1068 AERVAGKILKALSRA-YQIEGHALHSTSSIGIAVFPADGESVEVLMQNADAAMYHAKSAG 1126 Query: 837 RGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKL 896 R V + A S+R + D +++ Q ++ + R + +L Sbjct: 1127 RNNVQFFTASMNEAASDRRQLEEDL-HLALQQKQFVLHYQPQVDAQ---RRVFAVEALLR 1182 Query: 897 WSCEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA---VASKGISISLPLSVA 952 W ++ F D L + + V Q ++ + +++ +S Sbjct: 1183 WQHPHHGLVPPARFVPLAEDTGLIVPIGQWVLETACAQIKAWSVDARTRKLQVAVNVSAR 1242 Query: 953 GLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRLAGCRIVLSQV 1008 V L + ++NS P L L + +LD+ + + ++L G + Sbjct: 1243 QFRQPDFVELLRQAIDNSGANPARLKLELTESLVLDNVADTIDKMNAIKLLGVTFSMDDF 1302 Query: 1009 GRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLP 1068 G + L D L +D + N D ++ I + LG+K +A V Sbjct: 1303 GTGYSSLSYLTRLPLDQLKIDRAFVCRLPENRSDAVIAQTIVTMGRSLGLKVVAEGVETE 1362 Query: 1069 LVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 L G D G + + +D Sbjct: 1363 AQRQFLDSHGCDGYQGFLFSRPLAVDAF 1390 Score = 236 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 72/419 (17%), Positives = 150/419 (35%), Gaps = 20/419 (4%) Query: 283 MTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEEL 342 + + + + SE F+ E + G+ + +G L N AL + + Q Sbjct: 328 VVADLVERDRQLRANSERLEIFQRLAENAGQGIGMAQLDGSLLYANPALRRMIDMPQGAA 387 Query: 343 RGL-TFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTD 401 +F+Q E+ N+ V ++ ++ E + +G A+ + +V +T Sbjct: 388 CSDYSFKQFYSREEANRLQHAVLPMLL-PAGQWTGEIELRSLSGRTTPAIHTLFVVHNTA 446 Query: 402 GTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFEL 461 P + DI+E K E+ N+QL+ + +GI + + S ++R+ E+ Sbjct: 447 DEPPVIATVLADISERKEMEERNRQLLAEMETLLGNALVGIVHLR-QRCVVSCNRRLEEI 505 Query: 462 YEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALAN 521 + P E + + F E + KDG AL Sbjct: 506 FGYAPGELIGKSSQVFYPSIEVFEKIGARAYAVVAENRNFSGELTLRRKDGSLFWGALTG 565 Query: 522 RVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMN 581 R ++ + + D++E ++ E + ++ A+V + +I ++N Sbjct: 566 RAIDPSQPHAGSIWVFADISERREAEEESRNLLQ----AVEQSPVAIVITNRNAEIEYVN 621 Query: 582 PVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGS 641 P +++G+++ EA+G + + +++ ++G Sbjct: 622 PSFTRVTGYSRLEAIGQNPRILQ--SGEAPSDTYRSLWQTLLEGKVWTGLFHNRRKNGEL 679 Query: 642 YDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLS--YSASHDALTHLANRASFEK 698 + SI P+ G + V +DVTE + + L A R FE Sbjct: 680 FWEKASIAPIIGDHGEVTHYLAVKEDVTERLRADKLLQESEEAF---------RRLFED 729 Score = 196 bits (499), Expect = 4e-48, Method: Composition-based stats. Identities = 52/404 (12%), Positives = 130/404 (32%), Gaps = 13/404 (3%) Query: 283 MTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEEL 342 + + + + + + + +G+ + + + N+ L + GY+ EL Sbjct: 455 VLADISERKEMEERNRQLLAEMETLLGNALVGIVHL-RQRCVVSCNRRLEEIFGYAPGEL 513 Query: 343 RGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDG 402 G + Q ++ + + + E +S E ++G + W L + Sbjct: 514 IGKSSQVFYPSIEVFEKIGARAYAVVAENRNFSGELTLRRKDGSLFWGALTGRAI-DPSQ 572 Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELY 462 I DI+E + E+ ++ L++ A E + I I + + Sbjct: 573 PHAGSIWVFADISERREAEEESRNLLQ----AVEQSPVAIVITNRNAEIEYVNPSFTRVT 628 Query: 463 EIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANR 522 + + L+ + L + +A Sbjct: 629 GYSRLEAIGQNPRILQSGEAPSDTYRSLWQTLLEGKVWTGLFHNRRKNGELFWEKASIAP 688 Query: 523 VLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNP 582 ++ GEV L + D+TE + ++ L + +E + + ++ + N Sbjct: 689 IIGDHGEVTHYLAVKEDVTERLRADKLLQESEEAFRRLFEDAKDPLLLL-KDGSFIDCNR 747 Query: 583 VAEKMSGW-TQEEALGVPLLTV---LHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRS 638 ++ G+ ++ + LG + +G + +A + Sbjct: 748 ATLELLGYGSKAQLLGRDAADISPARQPDGQASGEKAAALIAAALRIGYHRFEWTHQRAD 807 Query: 639 GGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSA 682 G V ++TP++ + ++ +D++E R +L A Sbjct: 808 GSPVPVEVTLTPITLRGEVILHTLW--RDISERRVTETRLRLLA 849 Score = 146 bits (370), Expect = 4e-33, Method: Composition-based stats. Identities = 44/249 (17%), Positives = 88/249 (35%), Gaps = 9/249 (3%) Query: 271 LPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKA 330 + I L ++ ++ +ER+ A E+SA + + + + L+ N A Sbjct: 815 VTLTPITLRGEVILHTLWRDISERRVTETRLRLLAAAFEHSAEAIMVSDRDNRILEVNDA 874 Query: 331 LCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWA 390 C+ GY+ +E+RG + L+ ++ + + + I + E ++G Sbjct: 875 FCRLTGYAADEVRGSDPRLLSSGRTSAEEYRTMWQAI-NSTGHWQGEVWDRRKDGSYYPK 933 Query: 391 LLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGG--------IGI 442 L++S +R +G Y+I DI+E K E+ L TL + + Sbjct: 934 WLSISTIRGAEGNTEYYIGSFVDISERKAAEEKISHLAHFDTLTDLPNRSNLQGRLDQAL 993 Query: 443 WEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFK 502 + + S +L + +L E +RDS Sbjct: 994 ASARREGHGRSVAVMFLDLDRFKNINDTLGHHVGDALLLEVAARLRSSVRDSDVVARLGG 1053 Query: 503 LEFRITVKD 511 EF + + Sbjct: 1054 DEFVVVLTG 1062 Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats. Identities = 46/276 (16%), Positives = 95/276 (34%), Gaps = 14/276 (5%) Query: 281 NIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGY-SQ 339 + + K + ESE FR E + + L+ +G ++ N+A + LGY S+ Sbjct: 700 LAVKEDVTERLRADKLLQESEEAFRRLFEDAKDPLLLL-KDGSFIDCNRATLELLGYGSK 758 Query: 340 EELRGLTFQQLTWPE----DLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVS 395 +L G ++ + + + I + E + +G V + ++ Sbjct: 759 AQLLGRDAADISPARQPDGQASGEKAAALIAAALRIGYHRFEWTHQRADGSPVPVEVTLT 818 Query: 396 LVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWD 455 + L+ + DI+E + TE + + A E I + I + Sbjct: 819 PITLRGEVILHTL--WRDISERRVTETRLR----LLAAAFEHSAEAIMVSDRDNRILEVN 872 Query: 456 KRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRH 515 L + + ++ S ++ E KDG + Sbjct: 873 DAFCRLTGYAADEVRGSDPRLLSSGRTSAEEYRT-MWQAINSTGHWQGEVWDRRKDGSYY 931 Query: 516 IRALA-NRVLNKEGEVERLLGINMDMTEVKQLNEAL 550 + L+ + + EG E +G +D++E K E + Sbjct: 932 PKWLSISTIRGAEGNTEYYIGSFVDISERKAAEEKI 967 Score = 82.8 bits (204), Expect = 8e-14, Method: Composition-based stats. Identities = 39/336 (11%), Positives = 86/336 (25%), Gaps = 52/336 (15%) Query: 388 VWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWEL 447 +L+ +R +G L + + D QQ + I Sbjct: 167 RPSLIVARALRTAEGDFLGAVTAVLD----------LQQYQALFRAVDLGSTGSIVLRRS 216 Query: 448 KPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLE--- 504 + R L + + + +R + S + + Sbjct: 217 DDHRLVV--RWPHLADAVNKPLNPEHPARQRMNSGERTATLQFAAQSDGVYRIYSFQRIE 274 Query: 505 -------FRITVKDGIRHIRALANRV---------------LNKEGEVERLLGINMDMTE 542 I+ D + R A V L +R + D+ E Sbjct: 275 HYPFYFIIGISHDDALAGWRTRALVVGFSGCLLLALLAGLLLQIWRSEQREAKVVADLVE 334 Query: 543 VKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLT 602 + A + E ++ G+ + + + + NP +M Q A Sbjct: 335 RDRQLRANSERLEIFQRLAENAGQGIGMAQLDGSLLYANPALRRMIDMPQGAAC-SDYSF 393 Query: 603 VLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSV 662 + + L + ++ L SG + +++ + Sbjct: 394 KQFYSREEANRLQHAVLPMLLPAGQWTGEIELRSLSGRTTPAIHTLFVVHNTADEPPVIA 453 Query: 663 LVIQDVTESRKMLRQLSYSASHDALTHLANRASFEK 698 V+ D++E ++M + NR + Sbjct: 454 TVLADISERKEMEER--------------NRQLLAE 475 >UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V7A4_9PROT Length = 1013 Score = 987 bits (2553), Expect = 0.0, Method: Composition-based stats. Identities = 184/1004 (18%), Positives = 366/1004 (36%), Gaps = 60/1004 (5%) Query: 132 AIVPPLLGGVLVVLLTPGDDPLRAFLIWVLSESIGALALVPLGLLFKPHY---------L 182 ++ +L +++V + + W++ + A+ L + L+ + Sbjct: 25 SLTASMLLAIILVYIQWDVVSHDVLVGWLI--LLEAVQLARMALVVRYQRNATVAEEVIS 82 Query: 183 LRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFLTT 242 R R + + LP I +L + + A L+ Sbjct: 83 ARLMRFRFGVLVSGVIWGGASFLLFPQENLPHQMFLIFMLAGLTTASVVSYSADLVSAVI 142 Query: 243 VMMVSLMMAADPSLL---ATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISE 299 + + L+ ++ + +L FL++ L ++ + E Sbjct: 143 FALSIVTPLIARLLIVSDELAMAMAIAVLLYLGFLMVSLRLINRNLIENIRMRHEGELRE 202 Query: 300 -----SETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPE 354 S+ +R + +S +G+ N + +G ++ GL L+ Sbjct: 203 AAMNVSKERYRLLLAHSPVGIFHYDLNFVITYCNARFAELIGCPVAQVNGLDLYNLS--- 259 Query: 355 DLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDI 414 N L + ++G+ + + + +G W + + G + IA +E I Sbjct: 260 -DNAVLPALTAALAGDRGYFEGQYQAVFNDG---WIAMTCAASCDARGNVIGGIAIVESI 315 Query: 415 NELKRTEQVN-------QQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPH 467 +E K E + + + +G+W + I ++ I H Sbjct: 316 HERKMAEMALALSNQKHDEERKLFQTILDNLPLGMWMLGVDGKIKFVNETFCNALGIAAH 375 Query: 468 IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHI-RALANRVLNK 526 + + + + ++ R P + DG H+ R+ + Sbjct: 376 DFFDAGHYSDLLPLSIADKCKESDRACFMQGEPHYSTEWLPFTDGRAHLLEMTRVRLHDS 435 Query: 527 EGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEK 586 V L+G+ D+TE +++ L + E ++ D I +N Sbjct: 436 ANNVTGLIGLAADITERQKVESEL----RIAAAAFE-AQEGMLITDRHNVIMRVNQAFTS 490 Query: 587 MSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHY 646 ++G+ EE LG + + + ++++ + E +V + G Y + Sbjct: 491 ITGYLAEEVLGKNPCFL--ASGRHDAGFYQSMWEGLNEKGKWEGEVWNRRKDGEIYPEYL 548 Query: 647 SITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQT 706 I+ + + V +D+T ++ ++ A +D LT L NR +L L + Sbjct: 549 LISAVKDIKNEVANYVATFRDITANKAAESEIKKLAFYDPLTLLPNRRLLTDRLNHALAS 608 Query: 707 VNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFG 766 AL+FIDLD FK +ND+ GH GDALL+++A + S +R D LARLGGDEF Sbjct: 609 SARNRNIGALLFIDLDNFKTLNDTLGHDMGDALLKQVALRLKSCIREDDTLARLGGDEFV 668 Query: 767 LLLPDCN------VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAE 820 ++L + + A I +I++A+N + + + AS G+TL + E Sbjct: 669 VILENLSELAMDAATKAELIGEKILAALNQV-YPLASQEYHGAASIGVTLFAGHALSIDE 727 Query: 821 VMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVAS 880 +M QADIA Y SK GR + ++ +ERA + ++ + + + + QL + + Sbjct: 728 LMKQADIAMYQSKKSGRNTLRFFDLDTQKIINERAELEIELR-KAVDKKQLHLHYQIQLN 786 Query: 881 PRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVA 939 L +L W +I F D L + + V Q Sbjct: 787 SV---GTPLSAEALIRWVHPVRGLISPAHFIPLAEDTGLILPIGQWVLDTACAQLHSWQD 843 Query: 940 SK---GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----S 992 + +++++ +S V + E ++ + P+LL L + ++++ E + Sbjct: 844 ERFTQDLTLAVNVSAKQFHQKNFVALVKETVQRHAINPKLLKLELTESMLVENIEDIIVT 903 Query: 993 VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGH 1052 + LR G + L G LK + L +D + + D ++ I Sbjct: 904 MNALREMGIQFSLDDFGTGYSSLQYLKRLPLNQLKIDQSFVRELSSSSSDRAIVRTIVAM 963 Query: 1053 AQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 A+ L + IA V L IG + G + P++ L Sbjct: 964 AESLNLNVIAEGVETEEQHTLLQDIGCNYYQGYLFGKPMPIEQL 1007 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 986 bits (2550), Expect = 0.0, Method: Composition-based stats. Identities = 178/821 (21%), Positives = 331/821 (40%), Gaps = 22/821 (2%) Query: 286 VMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGL 345 + + + E +E++ + ++ EG+ + N+A YS E+ G Sbjct: 390 LEAEVEKRSRELRELSALQGAILEHAGALVVVLDREGRIRRFNRACEALTQYSFSEVEGR 449 Query: 346 TFQQLTWPEDLNKDLQQVEKLISG--EINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGT 403 PE+ + ++ E + ++ + R+G + S++ G Sbjct: 450 QVWDFIPPEERRIVQDEAFAVLFNDPEQSRSTLTNHWVARDGGRRLIEWSNSVLHDAQGK 509 Query: 404 PLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYE 463 + +A D+ + R E ++ R+ A +G W +L W MF ++E Sbjct: 510 VEFVVAVGNDVTDKMRAEAALKESESRLKEAQRIAQVGSWALDLVTGKLIWSDEMFRIFE 569 Query: 464 IPPH-IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALAN 521 +++ + + + PEDR+H K S+ + +P+ L R+ + DG ++ + Sbjct: 570 TDEAAFGQSYEAFLDALHPEDREHVNKAYMHSVTNHTPYDLVHRLLLPDGRVKWLHGRGE 629 Query: 522 RVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMN 581 K G+ G D+T K+ +AL + GEA++ D A I +N Sbjct: 630 TRYGKNGDPIASCGTVQDITARKKQEDAL----RLYASIFEHSGEAILIADQARHIIAVN 685 Query: 582 PVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGS 641 P ++G+ ++ G + + + +++ + +++ + G Sbjct: 686 PAFTNLTGYALDDIRGEEPTIL--AGGQASEESYRSTWASLEQTGYWQGEIIDRRKDGTL 743 Query: 642 YDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLR 701 Y +++ + DG V D+TE + Q+ + A HD LT L+NR S + QL Sbjct: 744 YPKWMAVSVVRDADGVLTHYVASFTDITERKLAEAQIKHLAYHDPLTGLSNRFSLQTQLD 803 Query: 702 ILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLG 761 L + A+VF+DLDRFK++NDS GHA GD LL E+A + +R SD++ARLG Sbjct: 804 QTLALARREQRTLAVVFLDLDRFKSINDSLGHALGDQLLVEVARRLRDNVRDSDIVARLG 863 Query: 762 GDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAE 820 GDEF ++L + + A +A +++ A+ + G AS GI+L + A Sbjct: 864 GDEFVVVLTEVGDAAGAARVADKLLGALV-PRYRIGGHALHTTASIGISLYPHDGDDADA 922 Query: 821 VMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVAS 880 +M AD A Y +K+ GR V + P+ + +R D + ++ Q + + Sbjct: 923 LMKNADTAMYHAKSQGRDNVQFFTPEMNQSVLKRLQFDHDLRV-AVEAGQFELHYQPQIN 981 Query: 881 PRIPEARNLWLISLKLWSCEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVA 939 R + + +L W ++ F + L L V +E +Q Sbjct: 982 --STSGRVVKVEALVRWQHPREGLVSPAEFIPIAEETGLILPLGEWVLNEACRQLRLWRD 1039 Query: 940 SK--GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH----AESV 993 + +++++ LS L S L+ + L N L L L I + + Sbjct: 1040 AGITDLTVAVNLSAHQLHSPALIPMVARTLGNHGLEGADLCLEITESVAMRDTTASIAQL 1099 Query: 994 QKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHA 1053 Q LR G + + G + LK D L LD ++ N D + A Sbjct: 1100 QALRDLGIHLSIDDFGTGYSSLSYLKLLPIDTLKLDQSFVCEIEFNPSDVAICAATIALA 1159 Query: 1054 QRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLD 1094 LG++ +A + L+ D + G + + P + Sbjct: 1160 HSLGLEVVAEGIETETQRRLLASHRCDFMQGYLFSAPLPAE 1200 >UniRef50_P38097 Uncharacterized protein yegE n=72 Tax=Proteobacteria RepID=YEGE_ECOLI Length = 1105 Score = 982 bits (2540), Expect = 0.0, Method: Composition-based stats. Identities = 1105/1105 (100%), Positives = 1105/1105 (100%) Query: 1 MSKQSQHVLIALPHPLLHLVSLGLVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRH 60 MSKQSQHVLIALPHPLLHLVSLGLVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRH Sbjct: 1 MSKQSQHVLIALPHPLLHLVSLGLVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRH 60 Query: 61 AGRMWPGIALSCSLGNIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQN 120 AGRMWPGIALSCSLGNIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQN Sbjct: 61 AGRMWPGIALSCSLGNIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQN 120 Query: 121 LADWLRLALGSAIVPPLLGGVLVVLLTPGDDPLRAFLIWVLSESIGALALVPLGLLFKPH 180 LADWLRLALGSAIVPPLLGGVLVVLLTPGDDPLRAFLIWVLSESIGALALVPLGLLFKPH Sbjct: 121 LADWLRLALGSAIVPPLLGGVLVVLLTPGDDPLRAFLIWVLSESIGALALVPLGLLFKPH 180 Query: 181 YLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFL 240 YLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFL Sbjct: 181 YLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFL 240 Query: 241 TTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISES 300 TTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISES Sbjct: 241 TTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISES 300 Query: 301 ETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDL 360 ETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDL Sbjct: 301 ETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDL 360 Query: 361 QQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRT 420 QQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRT Sbjct: 361 QQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRT 420 Query: 421 EQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVL 480 EQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVL Sbjct: 421 EQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVL 480 Query: 481 PEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDM 540 PEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDM Sbjct: 481 PEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDM 540 Query: 541 TEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPL 600 TEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPL Sbjct: 541 TEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPL 600 Query: 601 LTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIG 660 LTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIG Sbjct: 601 LTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIG 660 Query: 661 SVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFID 720 SVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFID Sbjct: 661 SVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFID 720 Query: 721 LDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFI 780 LDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFI Sbjct: 721 LDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFI 780 Query: 781 ATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRV 840 ATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRV Sbjct: 781 ATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRV 840 Query: 841 TVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCE 900 TVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCE Sbjct: 841 TVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCE 900 Query: 901 GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLV 960 GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLV Sbjct: 901 GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLV 960 Query: 961 NDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQKLRLAGCRIVLSQVGRDLQIFNSLKA 1020 NDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQKLRLAGCRIVLSQVGRDLQIFNSLKA Sbjct: 961 NDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQKLRLAGCRIVLSQVGRDLQIFNSLKA 1020 Query: 1021 NMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVD 1080 NMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVD Sbjct: 1021 NMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVD 1080 Query: 1081 LIYGEVIADAQPLDLLVNSSYFAIN 1105 LIYGEVIADAQPLDLLVNSSYFAIN Sbjct: 1081 LIYGEVIADAQPLDLLVNSSYFAIN 1105 >UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1R5_9NEIS Length = 1086 Score = 975 bits (2522), Expect = 0.0, Method: Composition-based stats. Identities = 217/1064 (20%), Positives = 406/1064 (38%), Gaps = 43/1064 (4%) Query: 44 APLWFPTSIMMVAFYRHAGR-MWPGIALSCSLGNIAASILLFSTSSLNMTWTTINIVEAV 102 + P + ++ RH R +W L+ L + A L +L++ V Sbjct: 34 PASFIPHGLFLLWAVRHPARSVWLWPLLAWGLASQWAGPLWAGGLALSLYL--------V 85 Query: 103 VGAVLLRKLLPWYNPLQNLADWLRLALGSAIVPPLLGGVLVVLLTPGDDPLRAFLIWVLS 162 GA L + L +L+ LRL + P +L+ + + +L Sbjct: 86 AGAARLAGIHHARLTLNSLSSLLRLLSSLLLAPAAAAALLLWGVQAFSGVGVPLVQALLQ 145 Query: 163 ESIGALALVPLGLLFKPH-YLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIV 221 ALALV R R LL +L+TLA+ + + + L + Sbjct: 146 CGALALALVLCVPAAFAGVEYSRRRYLELLLIALVTLALWVAVFVAGHVSLVPIHLLLYP 205 Query: 222 LLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPAN 281 L+W+A R A L+ L +++ + + + P + L ++L A Sbjct: 206 CLLWAACRAGIGGATLLGLLILVLATFLDGPSFQPVPLP------ANGIVLNLALVLSAQ 259 Query: 282 IMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEE 341 ++ A + + +S F + S M+L EG++L N+A + LG + E Sbjct: 260 LVATQSEAAARRIRQLQDSLARFEAWLRNSPNVMSLKDLEGRYLLVNRAYSRALGKAPAE 319 Query: 342 LRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTD 401 L G PE+ +Q +++S + E+ +G L+ + D Sbjct: 320 LIGKKSADFLPPEEARATAEQDRQVLSAL-ESRQYEQTL-TLDGLPGDFLVTKFPLFDAD 377 Query: 402 GTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFEL 461 G P DI + KR Q Q+ R E +GI+ + + + ++ E+ Sbjct: 378 GLPAGIGCIATDITQNKRERQAKQEAENRYHALIEQSLVGIYILQ-DECLAYVNDKLAEM 436 Query: 462 YEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSR-SPFKLEFRITVKDGIRHIRALA 520 P ++ E+RQ + I L S R+ KDG + Sbjct: 437 LGYPGEELQGERIETVLAH-EERQRLRQQITQRLSENISIMHFSARLVRKDGQLLDVEIH 495 Query: 521 NRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFM 580 +R+ G ++G+ +D+++ Q + ++ ++ E ++ +I + Sbjct: 496 SRLFEYRGR-SAIIGVVVDISDRVQADA----NQKLASKVFENAAEGILITGADYRIIAV 550 Query: 581 NPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGG 640 N +++G+ E +G DN + + +++ RS Sbjct: 551 NQAFTRITGYPPELVIGRVSRIF-----RDNTSWSVAMLDGLARHGHWQGEMLDRRRSHE 605 Query: 641 SYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQL 700 Y SI+ + G+ V V D+T ++ +L + A+HD LT L NR+ L Sbjct: 606 WYPAELSISAVRDDAGAITNYVGVFADITVRKQAEERLQFLANHDPLTRLPNRSWLIACL 665 Query: 701 RILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARL 760 +Q + S+ Q+ A++F+DLDRFK +NDS GH GD LLRE AS + ++ +ARL Sbjct: 666 EDRIQQIASSGQQVAVMFLDLDRFKLINDSFGHQTGDELLRETASRLEQVVGGRGQIARL 725 Query: 761 GGDEFGLLLPD-CNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAA 819 GGDEF LL+ + + +A I++ + EG+ V S GI++ + A Sbjct: 726 GGDEFTLLVSHFASQATLSTLAEDILAVLAQ-PLWLEGQELIVTGSLGISVYPHDGSDAR 784 Query: 820 EVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVA 879 ++ AD+A Y +K G+ + + A ER + + + ++ + + + Sbjct: 785 TLLKNADVAMYRAKEAGKNTYQFFAAEMNAQAIERLQLERGLR-QALERGEFELHFQPIV 843 Query: 880 SPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA- 937 + R L L W E ++ F + L + V + +Q A+ Sbjct: 844 A--AATYRLEALEVLLRWRHPELGLVSPVRFIPLAEETGLIRPIGDWVIRQACRQLAEWD 901 Query: 938 -VASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES---- 992 + +++ LS L+ + L + + L L + ++ + Sbjct: 902 CLGLHVPRLAINLSARQFEQQGLIMQVAGALAEAGIAAGRLELEMTESMVMQNPSEAVSL 961 Query: 993 VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGH 1052 + +L+ G R+ + G + LK D L +D + G+ + + I Sbjct: 962 LGELKALGVRLSIDDFGTGYSSLSYLKRFPLDTLKIDRSFIEGLPGDGDNAAIAEAILAM 1021 Query: 1053 AQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 A++L +A V L G L+ G + + P L Sbjct: 1022 ARKLSFSVVAEGVETEAQAAFLCAKGCQLLQGYLFSRPLPAAEL 1065 >UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IA0_DECAR Length = 925 Score = 975 bits (2521), Expect = 0.0, Method: Composition-based stats. Identities = 166/795 (20%), Positives = 323/795 (40%), Gaps = 31/795 (3%) Query: 317 LVGTEGQWLQTNKALCQFLGYSQEELRGLT---FQQLTWPEDLNKDLQQVEKLISGEINT 373 L + + + + GY+ E+ G T ++++T P+D + +E I G Sbjct: 111 LHDADWTMVFVSDGCQELSGYASSEILGKTGVSWEEITHPQDRGRVRACIEDAI-GSGQR 169 Query: 374 YSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITL 433 ++++ R ++G V W + +R + IEDI+ + T + + +R Sbjct: 170 FAVQYRIVCKSGQVKWVIERGVAIRDELDESV-IEGFIEDISVRRTTLEALEAAEQRYRN 228 Query: 434 ANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVW----YECVLPEDRQHAEK 489 E GI++ + + + + +LY + V P R+ Sbjct: 229 IFEHASEGIFQSTRDGHYLAANPALAKLYGYDNAQALMTDLADIERRLYVQPNRREEFLT 288 Query: 490 VIRDSLQSRSPFKLEFRITVKDGIR-HIRALANRVLNKEGEVERLLGINMDMTEVKQLNE 548 +I ++ + E + +DG R I A+ V +GE G D++E K+ Sbjct: 289 LIE---KNGAILNFESEVYRRDGSRIWISENAHVVFGPQGEFICYEGTVQDISERKRTEA 345 Query: 549 ALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITF 608 L + + + + EA++ D + +I NP ++G+ ++ +G + Sbjct: 346 HL----QLMAMVFSNSNEAIIVTDASNRIIATNPAFTCLTGYQPDDVIGKNPRIL--SAG 399 Query: 609 GDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDV 668 + ++++ A + ++ ++G +Y SI+ + DG + D+ Sbjct: 400 TTPTEVFSDMWTCLHREGAWQGELWDRKKNGEAYPKWLSISLVRDEDGQIRNHIGSFIDI 459 Query: 669 TESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVN 728 +E + ++ + A HD LT+LANR S ++L L + AL+ IDLDRFK +N Sbjct: 460 SELKATQERIRHLAHHDTLTNLANRFSLHEKLAQALAFCKRNRMQLALMLIDLDRFKTIN 519 Query: 729 DSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARFIATRIISA 787 D+ GH AGD LL ++A + +R SD++ARLGGDEF + LP + A +A I Sbjct: 520 DTLGHQAGDELLVQVAKRLSHAVRESDIVARLGGDEFVIALPGIGSPADAAHLADDITRE 579 Query: 788 VNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQ 847 ++ ++ +G+ R S GI + + + +++ AD+A Y +K GRG + Sbjct: 580 ISA-PYLIKGQELRTSPSIGICVYPGDGSEIGDLLKNADVAMYHAKANGRGNYQFFTEDM 638 Query: 848 AAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCE-GEIIDE 906 A +ER + D + I + ++ R + + +L W ++ Sbjct: 639 NIATTERMCLESDLRL-AITRREFLLHYQPQLDLR--SGTIVGVEALIRWQHPTRGLVSP 695 Query: 907 QTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK--GISISLPLSVAGLSSATLVNDLL 964 F + + A+ V E +Q + +S+ LS TL + Sbjct: 696 ADFIPIAEESGMIAAIGDWVLEEACRQLKVWQNRGITHLRMSINLSAGQFLDKTLPARIH 755 Query: 965 EQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKA 1020 E L + L L L + + + ++ L +G + + G LK Sbjct: 756 ELLAANDLSADRLDLEVTESMSMASPDESISVMKTLSSSGLTLSIDDFGTGYSSLAYLKL 815 Query: 1021 NMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVD 1080 L +D +++ + D + + A +LG++ +A V + L IG + Sbjct: 816 LPIHTLKIDRSFVKDIESDPNDADICDVTVLLAHKLGLEVVAEGVETEAQLKFLLSIGCE 875 Query: 1081 LIYGEVIADAQPLDL 1095 + G +I+ P D Sbjct: 876 KVQGYLISKPLPADQ 890 Score = 156 bits (394), Expect = 6e-36, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 97/271 (35%), Gaps = 15/271 (5%) Query: 286 VMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGL 345 + R + + +E +RN E+++ G+ +G +L N AL + GY + Sbjct: 208 DISVRRTTLEALEAAEQRYRNIFEHASEGIFQSTRDGHYLAANPALAKLYGYDNAQALMT 267 Query: 346 TFQQL-----TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHT 400 + P + L LI + E Y R+G +W +V Sbjct: 268 DLADIERRLYVQPNRREEFL----TLIEKNGAILNFESEVYRRDGSRIWISENAHVVFGP 323 Query: 401 DGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFE 460 G + + ++DI+E KRTE Q + + I + I + + Sbjct: 324 QGEFICYEGTVQDISERKRTEAHLQ----LMAMVFSNSNEAIIVTDASNRIIATNPAFTC 379 Query: 461 LYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA 520 L P + + L ++ E K+G + + L+ Sbjct: 380 LTGYQPDDVIGKNPRILSAGTTPTEVFSDMWT-CLHREGAWQGELWDRKKNGEAYPKWLS 438 Query: 521 -NRVLNKEGEVERLLGINMDMTEVKQLNEAL 550 + V +++G++ +G +D++E+K E + Sbjct: 439 ISLVRDEDGQIRNHIGSFIDISELKATQERI 469 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 84/259 (32%), Gaps = 16/259 (6%) Query: 285 MVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRG 344 + + H+ S + + + + TN A GY +++ G Sbjct: 335 QDISERKRTEAHLQ----LMAMVFSNSNEAIIVTDASNRIIATNPAFTCLTGYQPDDVIG 390 Query: 345 LTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTP 404 + L+ + + + E + E +NG+ L++SLVR DG Sbjct: 391 KNPRILSAGTTPTEVFSDMWTCLHRE-GAWQGELWDRKKNGEAYPKWLSISLVRDEDGQI 449 Query: 405 LYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI 464 I DI+ELK T++ + L TL N A + E + F RM + Sbjct: 450 RNHIGSFIDISELKATQERIRHLAHHDTLTNLANRFSLHEKLAQALAFCKRNRMQ--LAL 507 Query: 465 PPHIKPNWQVWYECV-LPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRV 523 ++ + + + +V + + + R+ + + + + Sbjct: 508 MLIDLDRFKTINDTLGHQAGDELLVQVAKRLSHAVRESDIVARLGGDEFVIALPGI---- 563 Query: 524 LNKEGEVERLLGINMDMTE 542 G + D+T Sbjct: 564 ----GSPADAAHLADDITR 578 >UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RS22_9PROT Length = 1006 Score = 973 bits (2515), Expect = 0.0, Method: Composition-based stats. Identities = 184/946 (19%), Positives = 352/946 (37%), Gaps = 52/946 (5%) Query: 183 LRHRNPRLLFESLLTLAITLTLSWLSML-YLPWPFTFIIVLLMWSAVRLPRMEAFLIFLT 241 + +L ++ + + L + +I++ W L A ++ Sbjct: 75 RQRAAQTVLVWGSWVAVTGVSTFFGGLRALLVVAYPLLILMGGW---LLGLRAAAVLASL 131 Query: 242 TVMMVSLMMAAD--------PSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRA- 292 TV+ + + D P A + + LLI+ + R Sbjct: 132 TVLAIVGFVVGDAWAWLPTPPPTPAVMHGLVQGACSLVALLLIVFLVRSYQSRIDDVRRL 191 Query: 293 ------ERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + E A + +G + + + C+ LG + L Sbjct: 192 ASDLAQRTAELQAREADLNRAQAVANVGSWVYDLVSGRIDMSAETCRILGLPTGTVGSLD 251 Query: 347 -FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPL 405 F P+D + Q + GE + E R W + +G PL Sbjct: 252 AFMARVHPDDRDTLQQAAAAALRGE--PFDNELRLV-FGETTRWITQRAEVEFDEEGKPL 308 Query: 406 YFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIP 465 + +DI K+ E ++ E L +E+ G I +L+ + + Sbjct: 309 RSLGTTQDITARKQLEASLREQKEFFRLISESIGEHIAVLDLQGQRLYNSPSYGQFFGDT 368 Query: 466 PHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVL 524 + V PEDR+ ++V R + ++ ++E+R+ DG +RH+ + + Sbjct: 369 RD--LRGSDSFADVHPEDRERVKRVFRQTTETGRGQEIEYRLVRNDGSVRHMASAGRVLG 426 Query: 525 NKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVA 584 +++GE R++ ++ D+TE KQ + + + + + D I +N Sbjct: 427 DRQGEAARVVVVSRDVTERKQAEQ----WERIAATAFE-SQQGMFITDANAVILRVNQAF 481 Query: 585 EKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDV 644 ++G+ +E +G + + + + + + ++ ++G + Sbjct: 482 TDITGYAADECIGQTPKLL--SSGRHDASFYAAMRESIERNGVWQGEIWNRRKNGDVFPE 539 Query: 645 HYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILL 704 +I+ + DG V + D++ + ++ + A +DALT L NR +LR+ + Sbjct: 540 WLTISSVRDGDGVVTHYVSALTDMSAHKAAQEEIRHLAFYDALTGLPNRRLLHDRLRVAI 599 Query: 705 QTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDE 764 + + ++ AL+FIDLD FK +ND+ GH GD LL+++ + S +R D +ARLGGDE Sbjct: 600 ASSVRSERQGALLFIDLDNFKTLNDTLGHDMGDRLLQQVGQRLSSSVREGDTVARLGGDE 659 Query: 765 FGLLLPDCN--VESAR----FIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQA 818 F ++L + E A + +II +N + G + S GITL Sbjct: 660 FVVMLENLGERPEEAAGQSRIVGEKIIKLLNR-PYDLSGHDYHNTPSVGITLFGGQQVGI 718 Query: 819 AEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGV 878 E+M +AD+A Y +K GR + ++P+ A + RA + D + + + Sbjct: 719 DELMKRADLAMYEAKASGRNALRFFDPRMQAVVTARADIEKDLR-AAVGRQSFFLAYQPQ 777 Query: 879 ASPRIPEARNLWLISLKLWSC-EGEIIDEQTFRRSFSDPALSHALDRRVFHE---FFQQA 934 + + +L W + + F + L L V Sbjct: 778 VD---ASGQVIGAEALLRWQHQQRGTVSPAEFIPVAEETGLILPLGLWVLETACAQAALW 834 Query: 935 AKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE--- 991 A + ++S+ +S A V+ +L L S PR L L + +LD+ + Sbjct: 835 AARPGRERFTVSVNVSARQFRQANFVDQVLAVLARSGAHPRNLKLELTESMLLDNVQDII 894 Query: 992 -SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQ 1050 + L+ G L G + LK D L +D ++ + DE++ I Sbjct: 895 AKMSALKARGVGFSLDDFGTGYSSLSYLKQLPLDQLKIDQSFVRDLLTDPNDEVIARTII 954 Query: 1051 GHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 A+ LG+ IA V D L+ G G + + L Sbjct: 955 ALARTLGLSVIAEGVESVEQQDALAAQGCLAYQGYLFSRPLALADF 1000 >UniRef50_A8FYM5 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FYM5_SHESH Length = 1055 Score = 971 bits (2512), Expect = 0.0, Method: Composition-based stats. Identities = 219/1118 (19%), Positives = 422/1118 (37%), Gaps = 114/1118 (10%) Query: 12 LPHPLLHLVSLGLVSFIFTL---FSLELSQFGTQLAPLWFPTSIMMVAFYRHAGRMWPGI 68 L H L +L +SF++ L L L+ ++P+W PT I + A R+WPGI Sbjct: 6 LKHHLRYLALCATLSFVYYLSGRLGLSLAFEQAGVSPVWPPTGIAISAVLIFGFRVWPGI 65 Query: 69 ALSCSLGNIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQNLADWLRLA 128 L L N++ + L FS + L N +EA+V LL + Y Q Sbjct: 66 MLGALLVNLSIA-LPFSAAIL---IALGNTLEAIVAGYLLIRCAERYPFTQVNHT--AWF 119 Query: 129 LGSAIVPPLLGGVLVVLLTPGDDPLRA------FLIWVLSESIGALALVPLGLLFK-PHY 181 + A++ P+ + ++ + + A + W L + +GAL +VPL L + PH Sbjct: 120 IAIAVMAPMFSATIGLVSLSMHNLIEASELGIVWSTWWLGDIVGALVIVPLLLTWFRPHE 179 Query: 182 LLRHRNPRLLFESLLTLAITLTLSWLSMLYLPW-----PFTFIIVLLMWSAVRLPRMEAF 236 + P + +++ L L S + + ++ LL+W+A+R + Sbjct: 180 SMNGGVPVMALWGTCLVSLGLALLIFSPWHTEYDPHQLLIFMMLPLLIWTALRFHHRGST 239 Query: 237 LIF--LTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAER 294 L+ + + + ++ P ++ + L++ + +++ + I + + Sbjct: 240 LLVTVFSGIAISGTLVGYGPFVMESTNQSLLTLQASVGAIMVTILILIASQ--EERKRVN 297 Query: 295 KHISESETHFRNAMEYSAIGMALVGTEGQWLQT-NKALCQFLGYSQEELRGLTFQQLTWP 353 + + + + VG L T NK L Q +++ G T + L Sbjct: 298 RRLLQVQQDLEA----------KVGQRTHELYTSNKQLAQE--VTRQHQLGETLKSLLNA 345 Query: 354 EDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIED 413 + + Q ++ + N Y G FI D Sbjct: 346 TNFTSNDQFLQSCVKDLANAY---------------------------GAYFAFIGIFSD 378 Query: 414 INELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQ 473 Q ++ + +W + + FS+ L P N Sbjct: 379 KT---------CQSIKTL---------AVWAGDKVEDNFSY-----RLRGTPCEDAMNHN 415 Query: 474 VW-----YECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEG 528 V PED + + L+ S F + I I + + ++ E Sbjct: 416 VELISSRAALHYPED------KLLNELEVDSYFGAPLVAPSGETIGIIAVMDKKAMDIEE 469 Query: 529 EVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMS 588 V+ +LG+ + ++ ++ +E E EA+V D KI +NP K++ Sbjct: 470 WVKPVLGLFANRVALELQRQSTHKEMEMAASVFKESAEAIVICDSEDKILRVNPAFYKIT 529 Query: 589 GWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSI 648 G++Q E +G + + ++ N +A + +V + ++G + ++ Sbjct: 530 GYSQIEVVGQSPQLLQ--SDRPIQSMLHNREAALKKNDIWQCEVSGYRKNGEHFLSWQTV 587 Query: 649 TPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVN 708 P+ +G + + D+TE + + A HD+LT L NR +F+ Q+ L+ Sbjct: 588 IPVKDENGDTQQIIYIFSDITERKLFEEHIYNLAHHDSLTQLPNRVAFQLQMNTALERAK 647 Query: 709 STHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLL 768 + + A++FIDLD FK +ND++GH GD LL+++A LR DV++R GGDEF +L Sbjct: 648 RSKTQMAVMFIDLDHFKMINDTSGHPVGDLLLQQVAERFKRALRKEDVISRFGGDEFTVL 707 Query: 769 LPDCNVESARF-IATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADI 827 L + ++A +A ++++ + F + AS GI + DN +M AD Sbjct: 708 LSNTRTDNATTVVARKLLACFYE-PFKLPSSEVVISASIGIGVFPDNGDSVDSLMMNADS 766 Query: 828 ACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEAR 887 A Y +K GR Y + ER + LD + + ++ ++ ++ P R Sbjct: 767 AMYRAKEKGRNCFQFYTKEMNQYAQERLELELDLR-KALERDEFVLHYQPQFDP---NGR 822 Query: 888 NLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA--VASKGIS 944 + +L W + ++ F L + + V Q ++ Sbjct: 823 IIGCEALIRWQHPDKGLLSPGEFINMAEITGLIVPIGKWVIDTACMQHKMWLSQGYPALN 882 Query: 945 ISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAG 1000 IS+ LS L+ + + S + P L L + ++ + E ++ + G Sbjct: 883 ISVNLSGRQFLHHDLLETVKNAITTSGITPSCLELELTESIMMVNVEETIRTLNAISSLG 942 Query: 1001 CRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKT 1060 + + G + LK + L +D + + D ++ I A L + Sbjct: 943 IHMSIDDFGTGYSSMSCLKRFPVNKLKIDQSFVRGLPQDKEDVAIVKSIIVMAHALNLTV 1002 Query: 1061 IAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 IA V ++ L + G + + Sbjct: 1003 IAEGVETLEQLEFLKSSRCEEFQGYYFSRPILAADIEQ 1040 >UniRef50_Q3A4W5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4W5_PELCD Length = 1274 Score = 968 bits (2504), Expect = 0.0, Method: Composition-based stats. Identities = 180/830 (21%), Positives = 347/830 (41%), Gaps = 28/830 (3%) Query: 284 TMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGY-SQEEL 342 + + + SE +R+ ++++ G+ +G+ + N A+ L Y S +EL Sbjct: 416 AWTTLERKLTEESLQVSEQKYRHIVDHAPFGITRTTRDGKLISANPAMANILKYDSSQEL 475 Query: 343 ---RGLT-FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVR 398 G + Q++ + +++ + +IS +++ ++G + + + Sbjct: 476 LETIGRSSLQEVIFSNPADREDMVDKVIISNSWCLHNL--SLRCKDGSLATCRVHSRRLS 533 Query: 399 HTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIF-SWDKR 457 + +EDI E T+Q Q+ + I E ++E+ L N + + Sbjct: 534 EKGSQNWEYENFLEDITEQLETQQTLQKNKKNIQQLAENTEAVLYEYNLSDNKWTYMAPQ 593 Query: 458 MFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIR 517 + ++ P + Q W + V D A + L + +E+R KDG Sbjct: 594 VERIFGYKPEDWIDNQFWLDRVHEADWGKASREELSKLNQQEAHSIEYRFYKKDGSIVWV 653 Query: 518 ALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKI 577 R+ + L G+ +D+T+ KQ L ++L ++ +VV D +I Sbjct: 654 RDIIRIESDAENKLCLHGLLIDITDSKQSESQL----KKLSRAIEQSPVSVVITDPEGRI 709 Query: 578 TFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCR 637 ++NP +++G+T EE + + + + ++++ TS ++ + Sbjct: 710 EYVNPKFTQLTGYTLEEVIAQNPRILK--SGNLLPSVYDSLWKTITSGKEWYGELENKRK 767 Query: 638 SGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFE 697 G + SI+PL G I + V +D+T+ + ++L Y A+HD LT LANR Sbjct: 768 DGSIFWESASISPLFDESGKIINFIGVKEDITQRKLNEKRLEYMATHDGLTGLANRTLLY 827 Query: 698 KQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVL 757 L I L + + A++ +DLDRFK +NDS GH GD +L+ + + +RS+D + Sbjct: 828 DHLEIALHQSQRSKKLVAVILLDLDRFKVINDSLGHLVGDQVLKAVGQRLKQYVRSTDTV 887 Query: 758 ARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNH 816 ARLGGDEF +LL D + +A IA ++ +N+ F GR V AS GI L + +N Sbjct: 888 ARLGGDEFVVLLTDVRDTTAAGKIAHNLLRKLNE-PFFLHGRELYVSASFGICLSETDNV 946 Query: 817 QAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAH 876 ++ ADIA Y +K G G Y + + M + + +++N+ + Sbjct: 947 DGTILLRNADIAMYKAKAEGCGLY-FYSHEMNEHLIKTLEMENSLR-QALEKNEFQLYYQ 1004 Query: 877 GVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAA 935 R + +L W + +I F + L + V E +Q+ Sbjct: 1005 PKV--EHATGRIIGCEALLRWRHPQRGMIPPSEFIPLAEETGLIVQIGHWVLAEACRQSK 1062 Query: 936 KA--VASKGISISLPLSVAGLSS-ATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA-- 990 +++++ +S L+ + LE S L P L L + ++ A Sbjct: 1063 IWETEGLPPLTMAVNISARQFYQGENLIQAVKSTLERSQLVPSQLELELTESMVMKDAVN 1122 Query: 991 --ESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITI 1048 +++K++ G + L G N L++ D L +D ++ + ++ Sbjct: 1123 AERTMRKIKQLGVSLSLDDFGTGYSSLNYLRSFPVDSLKIDRSFILDIASDASSAAILNS 1182 Query: 1049 IQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 I A LG++T+A V + ++ G + I G + + P + V Sbjct: 1183 IIAIAHTLGLQTVAEGVENNDQLALVANCGCNYIQGYLFSRPLPPEDFVA 1232 Score = 150 bits (379), Expect = 4e-34, Method: Composition-based stats. Identities = 79/515 (15%), Positives = 160/515 (31%), Gaps = 60/515 (11%) Query: 220 IVLLMWSAVRLPRMEAFLIF-------LTTVMMVSLMMAADPSLLATPRTYLMSHMPWLP 272 + L+ A+ L A +++++ + D + + + M + P Sbjct: 51 VPDLVLIAIDLHDENAIETLTLPPEDAPCPIIVMATKVKED-AAMEVLKAGAMDFIVKSP 109 Query: 273 FLLILLPANIMTMVMYAFRAERKHISESET-HFRNAMEYSAIGMALVGTEGQ--WLQTNK 329 + LP + ++ + + + E E ++ S + E + +K Sbjct: 110 EAIRELPHRVARVLDHWRVRQDNTLLEMELCQANLIVDNSPAVLFHWKAEDGWPIVSVSK 169 Query: 330 ALCQFLGYSQEELRGLTFQ--QLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDV 387 + Q GY+QEEL F L P+DL++ ++++ I+ + E R + +V Sbjct: 170 NISQ-FGYAQEELMSGDFSYATLVHPKDLDRLEEELQAQINRGERIFQTEYRIITKQKEV 228 Query: 388 VWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEA---------- 437 W + R G ++ I DI+E KRTE V M + LA Sbjct: 229 RWVDERTFVERDAAGKVSHYQGFIIDIDERKRTELVMAARMRLLQLATNNTLAQLLEATL 288 Query: 438 --------GGIGIWEWELKPNIFS----WDKR----MFELYEIPPHIKPNWQVWYECVLP 481 +G + + W +R + H + + Sbjct: 289 DEAEALTESRMGFYHFLEDDQKTLSLQAWSRRTKSDFCNIEGAGLHYPLEKAGVWVDCIR 348 Query: 482 EDRQHAEKVIRDSLQSRS------PFKLEFRITVKDGIRHIRALANRVLNKE--GEVERL 533 E R + P E + V G + + L + Sbjct: 349 ERRAVFHNDYASLPHANGLPKGHPPIVRELVVPVFRGEKIVAVLGMANKAEAYTQRDAEA 408 Query: 534 LGINMDMT----EVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSG 589 + D E K E+L +++ +D + K+ NP + Sbjct: 409 ASLLADFAWTTLERKLTEESLQVSEQKYRHIVDHAPFGITRTTRDGKLISANPAMANILK 468 Query: 590 WTQE----EALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIE-QDVVLHCRSGGSYDV 644 + E +G L + + + E++ ++ ++ L C+ G Sbjct: 469 YDSSQELLETIGRSSLQEVIFSNPADR---EDMVDKVIISNSWCLHNLSLRCKDGSLATC 525 Query: 645 HYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLS 679 LS N ++D+TE + + L Sbjct: 526 RVHSRRLSEKGSQNWEYENFLEDITEQLETQQTLQ 560 >UniRef50_A8H6Y6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=13 Tax=Proteobacteria RepID=A8H6Y6_SHEPA Length = 1064 Score = 965 bits (2496), Expect = 0.0, Method: Composition-based stats. Identities = 212/1021 (20%), Positives = 410/1021 (40%), Gaps = 43/1021 (4%) Query: 104 GAVLLRKLLPWYNPLQNLADWLRLALGSAIVPPLLGGVLVVLLTPGDDP------LRAFL 157 A+LL +L + +N L L I + + V+L P R + Sbjct: 13 AALLLAIVLVYDAFPRNHKRSLDLLWRVGIGVLVAIITISVMLMPWQHSNGVFIDSRTVI 72 Query: 158 IWVLSESIGALALVPLGLLFKPHYLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFT 217 + V G + + +L + L ++ + T+ + + +L Y Sbjct: 73 LSVCGLFFGGVPTLVAVILSCLYRLSEG--GIAVWSGIGTIVSSGLMGYLWGKYRKG--- 127 Query: 218 FIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLIL 277 +R+ + AF + +V ++ + + + + + P +L Sbjct: 128 ------DIGDIRISELFAFGLMTHSVALLWGLTMPTEIAINLLKQITVPLLAIFPITTVL 181 Query: 278 LPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGY 337 L +++ + R ++ + + F++ +G+A+ +W++ N +LCQ L Y Sbjct: 182 LGI-LLSRRIEIERDQKIKLQDHL-LFKSHFHSGNMGIAITDIAHEWIKVNPSLCQMLKY 239 Query: 338 SQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLV 397 +++EL L++ L +D + +++ G IN + ++ ++ +V+ + V+ Sbjct: 240 TEQELLSLSWLDLMSADDFQLYKHHLLRMLDGRINEFELDLCLIAKDETIVYTHMTVACQ 299 Query: 398 RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKR 457 R I + K E+ E++ L + +G W+W+++ +I ++ Sbjct: 300 RVQS-RVELIITGFLNRTSQKEAEKEKLASQEQLGLVLGSSELGFWDWDIRNDIIERNEH 358 Query: 458 MFELYEIPPHIK-PNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFK-LEFRITV-KDGIR 514 L ++W + + PEDR + I+ L + +E+RI Sbjct: 359 CAALLGCDIDTLNRQQKLWGDSIHPEDRVRVLRSIKAHLSGETEQHKVEYRIRTLASETL 418 Query: 515 HIRALANRV-LNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDM 573 I + ++ G R+ GI+ D+T+ K++ E+L + ++ EA+ D Sbjct: 419 WILDSGKVMSRDESGCPLRMCGIHTDITDRKRVEESL----KLAASVYNNSREAMSVQDD 474 Query: 574 AMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVV 633 I +N ++G+T+ E + + +N E ++ A + +V Sbjct: 475 KGLIININAAFTDITGYTESEVKNQNIKILQCS--RNNRSAYEQMHMAVEEEGRWQGEVW 532 Query: 634 LHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANR 693 L ++G + V ++ L + V + D+TE ++ + + A++D LT L NR Sbjct: 533 LRRKNGEEFVVWLTLNALFDAEAQTQRHVALFSDITEKKQAEKIIWKQANYDTLTGLPNR 592 Query: 694 ASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRS 753 L + +S Q AL+F+DLD FK VND+ GH GD LL E A + + +R Sbjct: 593 RMLLDYLNAEILKSDSREQHFALMFLDLDYFKEVNDTLGHDMGDMLLSEAAKRLKACIRD 652 Query: 754 SDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLID 812 SDV+ARLGGDEF ++L +++ +A I++ + + + + AS GITL Sbjct: 653 SDVVARLGGDEFTIVLSGVTDIKGVDKVAKHILTRIAE-PYNLGEETAYISASIGITLYP 711 Query: 813 DNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLM 872 D+ ++ AD A YA+K+ GR R + P R + D + I +++ Sbjct: 712 DDASTIEGLLKHADQAMYAAKDEGRNRFHYFTPSMQRYAKYRMRLIQDLR-SAIADHEFE 770 Query: 873 MLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFF 931 + + S + L +L W + ++ F + L + VF + Sbjct: 771 LYYQPIVSLQGGLG--LKAEALIRWRHPKRGLVSPIEFIAVAEETGLIIEIGNWVFQQAA 828 Query: 932 QQAAKAVASKGI--SISLPLSVAGLSSAT-LVNDLLEQLENSPLPPRLLHLIIPAEAILD 988 +Q+A GI IS+ S +N + L+ L + + I +LD Sbjct: 829 RQSALWRDRFGIEVQISINKSPVQFRDEGESINSWVNLLKTLNLTNNNICIEITEGLLLD 888 Query: 989 H----AESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEM 1044 + + + R +G +I L G LK D+L +D N+ N D Sbjct: 889 GNSAISSKLTQYRDSGIQISLDDFGTGYSSLAYLKKFDIDFLKIDQSFTRNLDSNSDDFT 948 Query: 1045 LITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNSSYFAI 1104 L I A +LGMK IA V L+ G D G + + P++ + + Sbjct: 949 LCEAIIVMAHKLGMKVIAEGVETDYQRKILANAGCDFGQGYLFSRPVPVEKFEQAFLVPV 1008 Query: 1105 N 1105 N Sbjct: 1009 N 1009 >UniRef50_C6XBJ6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBJ6_METSD Length = 1150 Score = 962 bits (2488), Expect = 0.0, Method: Composition-based stats. Identities = 184/864 (21%), Positives = 346/864 (40%), Gaps = 29/864 (3%) Query: 250 MAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAME 309 +L Y+ + L + ++ I+ + + + + ++ + ++ Sbjct: 294 WVGQSPVLLPYSRYIAPALGLLSLVGAIVLLWILLLR-RSVKTKTAELANQHQRLQQIID 352 Query: 310 YSAIGMALVG-TEGQWLQTNKALCQFLGYSQEEL---RGLTFQQLTWPEDLNKDLQQVEK 365 +A G G + N + LGY+ +EL + + L P+DL + +Q +E Sbjct: 353 GTAAGTWEWDIRSGDCI-VNPRWAEMLGYTPDELEPCTADSCRALCHPDDLEQLVQALEA 411 Query: 366 LISGEINTYSMEKRYYNRNGDVVWALLAVSLVRH-TDGTPLYFIAQIEDINELKRTEQVN 424 + GE + ++ E R ++NG +W + R G L +I +LK E Sbjct: 412 HLRGETDYFASESRRRHKNGHWIWVADRGRVTRRSPQGEALTMSGTRLEITKLKLAETTL 471 Query: 425 QQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDR 484 +Q +E+ + + I + ++ + + E + + V P+ Sbjct: 472 KQAVEQQKMFIQQAPICVAMFDRDMRYLACSNQWQEEFGHQQGSLLGLNHYD--VHPDIP 529 Query: 485 QHAEKVIRDSLQSRSPFKLE-FRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEV 543 + + + +L + E I R + ++ ++ ++ + +++ Sbjct: 530 EKWRQAHQRALAGERLEEEEDLWIRADGQHLWTRWMITPWMDDSQTIQGIIISSENISAR 589 Query: 544 KQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTV 603 KQ E L H + EA++ D I +NP +M+G++ EE +G + Sbjct: 590 KQAEEEL----RLAHTVFEHSSEAMLVTDADNNIITINPAFSEMTGYSLEEVIGKNPKIL 645 Query: 604 LHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVL 663 + + +++ + ++ +SG Y +I + + DG V Sbjct: 646 --SSGRQGKEFYQELWNTLETSGEWRGEIWNRRKSGEEYAEWLAINNIYSEDGKLFRRVA 703 Query: 664 VIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDR 723 + D+TE ++ + A++D LT L NR F +L+ ++ H + AL+FIDLDR Sbjct: 704 LFSDITEKKRADALIWNQANYDLLTQLPNRRLFSDRLQQEIKKSQHDHSQFALLFIDLDR 763 Query: 724 FKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARF-IAT 782 FK VND+ GH+ GD LL E + + L+ +D + RLGGDEF +++ + S IA Sbjct: 764 FKEVNDTLGHSHGDYLLIEASHRIQRHLKETDTVGRLGGDEFTVIIANLPDPSVMTLIAQ 823 Query: 783 RIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTV 842 R++ A+ + EG + + AS GIT+ ++ +AE++ AD A Y +K GR R + Sbjct: 824 RVLDALAA-PYDLEGEIVYLSASIGITVFPEDATTSAELLKNADQAMYEAKKNGRNRFSF 882 Query: 843 YEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEG 901 + P A R M D + + NQ + + + R +L W E Sbjct: 883 FTPMMQAMAQARMRMMRDLR-NALGLNQFTVYFQPIVD--LSSQRIHKAEALIRWQHPEL 939 Query: 902 EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVA--SKGISISLPLSVAGLSSATL 959 I F + L H + VF + Q + + +S+ S T Sbjct: 940 GFISPAEFIPLAEETGLIHEIGDWVFQQSAQLVKQCIPIVGDDFQVSVNKSPVQFRDRTQ 999 Query: 960 V-NDLLEQLENSPLPPRLLHLIIPAEAILDH----AESVQKLRLAGCRIVLSQVGRDLQI 1014 D +E L L + + I +L+ ++ + R AG ++ + G Sbjct: 1000 AHQDWMEYLSGLGLSGHNIVVEITEGLLLNADSGISDKLLHFRDAGMQVAIDDFGTGYSS 1059 Query: 1015 FNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTL 1074 + LK DYL +D N+ G D L I A +L ++ IA V D L Sbjct: 1060 LSYLKKFDIDYLKIDQSFVRNLSGEGEDLALCEAIATMAHKLDLRVIAEGVETTAQRDLL 1119 Query: 1075 SGIGVDLIYGEVIADAQPLDLLVN 1098 + IG D G + + P + + Sbjct: 1120 AQIGCDYGQGYLFSRPVPAEEFMQ 1143 >UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P5X9_9PROT Length = 927 Score = 962 bits (2488), Expect = 0.0, Method: Composition-based stats. Identities = 175/825 (21%), Positives = 320/825 (38%), Gaps = 29/825 (3%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGT-EGQWLQTNKALCQFLGYSQEELRGL 345 + E K + + +E + G+ L+ + TN+ GY+ EL G Sbjct: 115 ITFDVTEDKKAAAALRLQSQIVENAVEGIVLIKASDSTIQYTNRQFETLFGYAPGELIGK 174 Query: 346 TFQQLTWPEDLN--KDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGT 403 + P + + + Q++ + + E +S E ++G + L S +H + Sbjct: 175 HISIINAPGNKSQMETAQEINRQLEKE-GVWSGEVFNRRKDGTTINTFLNASSFQHPE-L 232 Query: 404 PLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYE 463 +I DI + K TE V + + A + G W +++ + + L Sbjct: 233 GDLWIGYQRDITKRKLTEAVMLEKESQYRAAIDTAADGFWLVDMQGRLLEVNDAYARLSG 292 Query: 464 IPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRV 523 + + ++ + I + +++ + + KDG ++ Sbjct: 293 YSREELIGMSIPELDAI-DNSELVRARIEEIIRNGGYLEFDTMHKRKDGSLWPVHISTTY 351 Query: 524 LNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPV 583 + G R + D+TE K+ E+L + ++ EA++ D I +NP Sbjct: 352 SSVSG--GRCFVFSTDLTEQKRAEESL----RLAAMVYENSSEAILVTDADNLIIAVNPA 405 Query: 584 AEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYD 643 E+M+G+ E LG + + +++ A + +V ++G Y Sbjct: 406 FEQMTGYAAAEVLGKNPRIFK--SGRHDRAFYHSMWLALDTEGYWHGEVWDKRKNGEEYI 463 Query: 644 VHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRIL 703 +I + DG+ V + D+TE +K+ + A++D+LT L NR F +L Sbjct: 464 KLLTINVIRDDDGAIYRHVALFTDITERKKVEELIWRQANYDSLTKLPNRQMFHDRLEQE 523 Query: 704 LQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGD 763 + + AL+ IDLDRFK VND+ GH GD LL E A + + +R SD +ARLGGD Sbjct: 524 AKKAHRAGLSMALLLIDLDRFKEVNDTLGHDKGDILLIEAARRISACVRESDTVARLGGD 583 Query: 764 EFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVM 822 EF ++L + ++ S +A I+ ++ + F + + AS GI+L ++ + + Sbjct: 584 EFIVILSELEDMASIDRVAQDILGSLAE-PFKLDAEPAYISASIGISLYPNDATELDVLF 642 Query: 823 SQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPR 882 AD A Y +K GR R + A R ++ D + + Q + + Sbjct: 643 KHADQAMYVAKYAGRNRFNYFTKDMQEAAQARMHLANDLRI-AVAAGQFRVYYQPIV--E 699 Query: 883 IPEARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVA-- 939 + + +L W ++ F + L + VF + QQ + Sbjct: 700 MSSGQIYKAEALIRWQHPVRGMVSPAEFIPLAEETGLIVPIGEWVFRQAVQQVVQWRRKF 759 Query: 940 SKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE-----SVQ 994 + IS+ S A + E LE + + + I +L AE + Sbjct: 760 HRSFQISVNKSPVQFRHAESL-SWPEYLEQQHVSGDSIIVEITEGLLL-DAEVEVNKKLL 817 Query: 995 KLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQ 1054 + R AG ++ + G + LK DYL +D N+ D L I A Sbjct: 818 RFRDAGIQVAIDDFGTGYSSLSYLKEFDIDYLKIDQSFVRNLGPGTSDLALCEAIIVMAH 877 Query: 1055 RLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNS 1099 +LG K IA V + L+ G D G + + P + Sbjct: 878 KLGFKVIAEGVETSTQHELLAAAGCDYGQGYLYSRPLPPEEFERQ 922 Score = 199 bits (506), Expect = 7e-49, Method: Composition-based stats. Identities = 62/387 (16%), Positives = 135/387 (34%), Gaps = 14/387 (3%) Query: 299 ESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNK 358 + ++ ++ + G+ + N A + G + + L G Q PE + + Sbjct: 4 QLNKQVQDIVDSIPAATFIKDAGGRIVYMNHACEEQWGITFDVLGGTDGSQFFPPEQIER 63 Query: 359 DLQQVEKLISGEINTYSMEKRYYN-RNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINEL 417 ++ ++I+G E ++N + + + +G L+ + D+ E Sbjct: 64 FREKDREVIAGGKQI-EYEAPFWNAKLKENRIGFFIKNPTFDAEGKLLFLVCITFDVTED 122 Query: 418 KRTEQVNQQLMERITLANEAGGIGI-WEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWY 476 K+ + + E GI I +++ L+ P + Sbjct: 123 KKAAAALRLQSQ----IVENAVEGIVLIKASDSTIQYTNRQFETLFGYAPGELIGKHISI 178 Query: 477 ECVLPEDRQ-HAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLG 535 Q + I L+ + E KDG L + +G Sbjct: 179 INAPGNKSQMETAQEINRQLEKEGVWSGEVFNRRKDGTTINTFLNASSFQHPELGDLWIG 238 Query: 536 INMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEA 595 D+T+ K + +++ + +D+ + +DM ++ +N ++SG+++EE Sbjct: 239 YQRDITKRKLTEAVMLEKESQYRAAIDTAADGFWLVDMQGRLLEVNDAYARLSGYSREEL 298 Query: 596 LGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLD 655 +G+ + + I + + I + +E D + + G + VH S T S Sbjct: 299 IGMSIPELDAIDN--SELVRARIEEIIRNGGYLEFDTMHKRKDGSLWPVHISTTYSSVSG 356 Query: 656 GSNIGSVLVIQDVTESRKMLRQLSYSA 682 G V D+TE ++ L A Sbjct: 357 GR--CFV-FSTDLTEQKRAEESL-RLA 379 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 107/271 (39%), Gaps = 10/271 (3%) Query: 284 TMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELR 343 + + + E E+ +R A++ +A G LV +G+ L+ N A + GYS+EEL Sbjct: 240 QRDITKRKLTEAVMLEKESQYRAAIDTAADGFWLVDMQGRLLEVNDAYARLSGYSREELI 299 Query: 344 GLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGT 403 G++ +L ++ ++E++I + + ++G + ++ + + G Sbjct: 300 GMSIPELDAIDNSELVRARIEEIIRN-GGYLEFDTMHKRKDGSLWPVHISTTYSSVSGGR 358 Query: 404 PLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYE 463 F D+ E KR E+ + + E I + I + + ++ Sbjct: 359 CFVF---STDLTEQKRAEESLRLAA----MVYENSSEAILVTDADNLIIAVNPAFEQMTG 411 Query: 464 IPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHI-RALANR 522 DR + +L + + E K+G +I N Sbjct: 412 YAAAEVLGKNPRIFKSGRHDRA-FYHSMWLALDTEGYWHGEVWDKRKNGEEYIKLLTINV 470 Query: 523 VLNKEGEVERLLGINMDMTEVKQLNEALFQE 553 + + +G + R + + D+TE K++ E ++++ Sbjct: 471 IRDDDGAIYRHVALFTDITERKKVEELIWRQ 501 >UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q608F9_METCA Length = 965 Score = 957 bits (2476), Expect = 0.0, Method: Composition-based stats. Identities = 174/829 (20%), Positives = 326/829 (39%), Gaps = 26/829 (3%) Query: 278 LPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGY 337 L + + +F + + +E + + + +G+ NK + GY Sbjct: 141 LRSVGTVWDVTSFHETEEKLH----RLAAIVESTGDTVIVSDLQGRIRTWNKGAERMWGY 196 Query: 338 SQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLV 397 + EE+ G L P + Q+ + + E E R +++G L VS + Sbjct: 197 AAEEIIGQPVTVL-PPLAKQGEPGQILRRVIDEHEVVRFESRGLHKDGRDFPISLTVSPL 255 Query: 398 RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKR 457 + A I DI E++R + Q+ ++ + + + + + + N + Sbjct: 256 FDAENRLTGVSAIIRDITEMERLKATLQERLKLVEMVFQYSVSCLVVLDPQFNFIRVNPA 315 Query: 458 MFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPF--KLEFRITVKDGIRH 515 + + P D + + + + + F + G+ + Sbjct: 316 YARACRRDVAEFEGRNHFE--LYPSDARFIFEEVVRTRRPFEAVARPFTFPDQPERGVTY 373 Query: 516 IRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAM 575 VL+ +GEVE LL +D+T+ ++ L + +AV+ D Sbjct: 374 WDWNLVPVLDGKGEVEYLLFSLVDVTDRQKATAQL----RLIETAFQHTRDAVLITDARA 429 Query: 576 KITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLH 635 +I +NP E ++G++ E +G + + +G + A + ++ Sbjct: 430 RILRVNPAFETITGYSAGEVVGRTPRMLQ--SGRHDGAFYRRFWRALETEGHWSGEIWNR 487 Query: 636 CRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRAS 695 R G + S++ + DGS V + D++E ++ Q+ Y + HD LT L NRA Sbjct: 488 HRDGHIFPAWQSVSAVKGPDGSTTHYVSIFTDISEFKRAEAQIRYLSYHDDLTGLPNRAY 547 Query: 696 FEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSD 755 F+ +L L++ ++ ALV +DLDRFK +NDS GH+ GD LL ++A + D Sbjct: 548 FQARLDQLIEAAARDRKQIALVVLDLDRFKTINDSLGHSVGDELLCQVAERIQDCTGQGD 607 Query: 756 VLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNN 815 +AR GGDEF ++L D + A +A +ISA+ + GR V S GI+L + Sbjct: 608 FVARQGGDEFVVILADSDAVRAARVANAMISAIAK-PAVAGGRTLIVTPSLGISLYPHDA 666 Query: 816 HQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLA 875 + ++ AD A Y +K+ GR + + +A +ER A+ + + + + + Sbjct: 667 GDSESLIKSADAAMYHAKSLGRNTYQFFSAEMSAVATERLALE-NALHQALSNGEFRLYY 725 Query: 876 HGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQA 934 + R + L +L W E + F + + H + R V E +Q Sbjct: 726 QPQI--EVCSRRLIGLEALIRWRHPEVGWVPPLRFIPLAEETGIIHRIGRWVLEEACRQQ 783 Query: 935 AKAVASKG--ISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA-- 990 + A+ + +++ LS L + L L P LL L + A++ Sbjct: 784 REWQAAGLCIVPVAVNLSPLQLQKDDFPEQVEALLSGCRLAPGLLELELTETAVMRDVGR 843 Query: 991 --ESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITI 1048 + ++KL+ G R + G L D L +D +V + Sbjct: 844 MSDMLRKLKERGTRFSIDDFGTGYSSLGYLNRFPVDKLKIDQSFIRDVTRREDHAAITRA 903 Query: 1049 IQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 I A++L +K +A V ++ L G D G + P D + Sbjct: 904 IIALAKQLHLKVVAEGVETAEQLEFLERAGCDGAQGFYFSRPVPADEIA 952 Score = 192 bits (490), Expect = 5e-47, Method: Composition-based stats. Identities = 64/415 (15%), Positives = 133/415 (32%), Gaps = 17/415 (4%) Query: 271 LPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKA 330 L + +P + ++ + + S H R A + + +G + L+ + Sbjct: 6 LALGVAFVPIALAYGLLLKPKRAEAALRRSAFHLREAQQVANLGSWELDLVQGRLEWSDQ 65 Query: 331 LCQFLGYSQEELRGLT--FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVV 388 + + E F L P+D + + I+ +Y + R +G V Sbjct: 66 VFRIFEIDPERFEASYEAFLALVHPDDRERVDAAYRRSIADR-GSYEIVHRLLMPDGRVK 124 Query: 389 WALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELK 448 DG PL + + D+ TE+ R+ E+ G + +L+ Sbjct: 125 HVRERCQTFYSEDGRPLRSVGTVWDVTSFHETEEKL----HRLAAIVESTGDTVIVSDLQ 180 Query: 449 PNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRIT 508 I +W+K ++ Q + +++R + + E R Sbjct: 181 GRIRTWNKGAERMWGYAAEEIIG-QPVTVLPPLAKQGEPGQILRRVIDEHEVVRFESRGL 239 Query: 509 VKDGIRH-IRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEA 567 KDG I + + + E + + I D+TE+++L L + + + + Sbjct: 240 HKDGRDFPISLTVSPLFDAENRLTGVSAIIRDITEMERLKATLQERLKLVEMVFQYSVSC 299 Query: 568 VVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFG---DNGPLMENIYSADTS 624 +V +D +NP + E G + + + A Sbjct: 300 LVVLDPQFNFIRVNPAYARACRRDVAEFEGRNHFELYPSDARFIFEEVVRTRRPFEAVAR 359 Query: 625 RSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLS 679 G +Y ++ P+ G + + DVT+ +K QL Sbjct: 360 ----PFTFPDQPERGVTYWDW-NLVPVLDGKGEVEYLLFSLVDVTDRQKATAQLR 409 Score = 129 bits (325), Expect = 7e-28, Method: Composition-based stats. Identities = 40/341 (11%), Positives = 94/341 (27%), Gaps = 31/341 (9%) Query: 277 LLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLG 336 L + + + + + E +YS + ++ + +++ N A + Sbjct: 262 LTGVSAIIRDITEMERLKATLQERLKLVEMVFQYSVSCLVVLDPQFNFIRVNPAYARACR 321 Query: 337 YSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSL 396 E G +L + + V E G W + Sbjct: 322 RDVAEFEGRNHFELYPSDARFIFEEVVRTRRPFEAVARPFTFPDQPERGVTYW-DWNLVP 380 Query: 397 VRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDK 456 V G Y + + D+ + ++ + I A + + + + I + Sbjct: 381 VLDGKGEVEYLLFSLVDVTDRQKATAQLR----LIETAFQHTRDAVLITDARARILRVNP 436 Query: 457 RMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHI 516 + D + +L++ + E +DG Sbjct: 437 AFETITGYSAGEVVGRTPRMLQSGRHD-GAFYRRFWRALETEGHWSGEIWNRHRDGHIFP 495 Query: 517 RAL-ANRVLNKEGEVERLLGINMDMTEVKQLNEALFQE---------------KERLHIT 560 + V +G + I D++E K+ + + RL Sbjct: 496 AWQSVSAVKGPDGSTTHYVSIFTDISEFKRAEAQIRYLSYHDDLTGLPNRAYFQARLDQL 555 Query: 561 LDSI-----GEAVVCIDMAMKITFMNPVAEKMSGWTQEEAL 596 +++ A+V +D+ + +N G +E L Sbjct: 556 IEAAARDRKQIALVVLDLD-RFKTINDSLGHSVG---DELL 592 Score = 58.9 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 21/139 (15%), Positives = 38/139 (27%) Query: 544 KQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTV 603 K+ AL + L +D+ + ++ E + Sbjct: 26 KRAEAALRRSAFHLREAQQVANLGSWELDLVQGRLEWSDQVFRIFEIDPERFEASYEAFL 85 Query: 604 LHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVL 663 + D + + R + E L G V + DG + SV Sbjct: 86 ALVHPDDRERVDAAYRRSIADRGSYEIVHRLLMPDGRVKHVRERCQTFYSEDGRPLRSVG 145 Query: 664 VIQDVTESRKMLRQLSYSA 682 + DVT + +L A Sbjct: 146 TVWDVTSFHETEEKLHRLA 164 >UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RK65_9PROT Length = 1327 Score = 956 bits (2472), Expect = 0.0, Method: Composition-based stats. Identities = 178/844 (21%), Positives = 310/844 (36%), Gaps = 40/844 (4%) Query: 283 MTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEEL 342 + + A RA + + ES + + + IG+ L+ N+ + GY + L Sbjct: 493 LFEDVTARRAAEEALVESLWEQQLIFDNAMIGI-SYHRNRMILRCNRRCEEIFGYLEGGL 551 Query: 343 RGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDG 402 G + L ++ + + + S T+ E Y R+G +W + Sbjct: 552 AGQPTRVLFASDEAWEAVGRQVYGESASGETFDGELLYQRRDGTPIWVHAIGRTI-GESA 610 Query: 403 TPLYFIAQIEDINELKRTEQVNQQLM------------------ERITLANEAGGIGIWE 444 +I D+ + EQ +Q + EA ++ Sbjct: 611 DSETWIWAYADVTAQRAAEQALRQSHLELEQRVADRTLELSQQLHFMRQLIEAIPGPVFY 670 Query: 445 WELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLE 504 + ++ EL V+ + + + + L E Sbjct: 671 KSQEGRYLGCNQAFLELIGKSRDEVVGATVY-DVAPADLADRYKAADDELLARLGSQVYE 729 Query: 505 FRITVKDGIRHIRALANRVLNKEGE-VERLLGINMDMTEVKQLNEALFQEKERLHITLDS 563 R+ DG K GE L+G+ +D+TE K++ L Q DS Sbjct: 730 ARVLDADGHYRDVIFHKATYGKPGENGGGLVGVMLDITERKRMEARLLQ----AATVFDS 785 Query: 564 IGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADT 623 E + I +N +++G+T++E +G + + + +++ A Sbjct: 786 SAEGITITAPDGNIIAVNRAFTEITGYTEDEVIGRNPRMLQ--SGFQDRRFYLDMWQALG 843 Query: 624 SRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSAS 683 ++ ++ + G ++ +I+ + G V V D+TE R+ QL + A Sbjct: 844 TQGRWRGELWNRRKDGQTFLESLTISAVKDAQGKVAHYVGVFSDITELRRAHDQLDHQAH 903 Query: 684 HDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLREL 743 HD LT L NR +L LQ + A+ FIDLDRFK +ND+ GH GD +L E+ Sbjct: 904 HDPLTGLPNRLLLGDRLHKALQRAHRDETGLAVFFIDLDRFKNINDTLGHQVGDRVLCEV 963 Query: 744 ASLMLSMLRSSDVLARLGGDEFGLLLPDCN-VESARFIATRIISAVNDYHFIWEGRVHRV 802 A + ++R SD + RLGGDEF +++ D + IA +I++ + E V Sbjct: 964 AWRLGRLMRESDTVGRLGGDEFLIVIEDVGEPTAVSHIAEKILNVLQASPVTVE-HEFFV 1022 Query: 803 GASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQ 862 GAS GI++ + A +M AD+A Y +K GR + R M D + Sbjct: 1023 GASIGISVFPQDGADAETLMKNADVAMYRAKERGRNTYEFFTKDLTQTSLARLQMETDLR 1082 Query: 863 WRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHA 921 R I+ +L + S + + + +L W + ++ F + + L Sbjct: 1083 -RAIERGELRVYLQPQFS--LATGKVVGAEALVRWLRPQQGLVLPGEFIKLAEESGLIVP 1139 Query: 922 LDRRVFHEFFQQAAKA--VASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHL 979 + V Q A +S+ +S + + LE S LP R L L Sbjct: 1140 IGEWVQGTAACQWATWVAAGLAPGVLSVNVSGVEFARGRIQQTARRTLELSGLPARFLEL 1199 Query: 980 IIPAEAILDHAE----SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCAN 1035 I AI+ HAE + LR G +V+ G LK + L +D Sbjct: 1200 EITESAIMSHAENSVQVLDNLRAMGISLVIDDFGTGYSSLAYLKRLPLNKLKVDQSFVRG 1259 Query: 1036 VQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDL 1095 + + D + + L + IA V + L+G G D + G + P D Sbjct: 1260 LPNDTEDCAIARAVIALGHSLQLTVIAEGVETEAQREFLTGEGCDEMQGYLRGRPMPFDD 1319 Query: 1096 LVNS 1099 Sbjct: 1320 YHAR 1323 Score = 219 bits (558), Expect = 6e-55, Method: Composition-based stats. Identities = 65/420 (15%), Positives = 134/420 (31%), Gaps = 10/420 (2%) Query: 259 TPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALV 318 + P P L + +T + + + E + E + G+ ++ Sbjct: 98 VAHLIARAIDPAAPRLGTVWIVRDVTQEVLTRDTSARLLREQ----QLIFENAETGIVIL 153 Query: 319 GTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEK 378 E + N+ + LGY+ +EL G + + E+ + + E Y + Sbjct: 154 -RERIIQRCNRRFAELLGYAADELVGQSTRLYYPSEEAWLETGRRAYAAIAETGIYHGDT 212 Query: 379 RYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAG 438 + RNG+ + S + + ++ ED++E + + L+ TL EA Sbjct: 213 IFRRRNGESFCCHITGS-MMNRANPDEGYVWLYEDVSEKRASAAAMDALLREQTLIFEAA 271 Query: 439 GIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSR 498 IGI I + + ++ P E + + + + Sbjct: 272 PIGIAFVR-DRIIQRCNPSLERIFGYSPGQLIGQSTRCFFASEEAWREKGERAQLLIDEC 330 Query: 499 SPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLH 558 F E + DG+ + + N + L+ + D+TE +Q + A+ Sbjct: 331 GSFVGEVQYCKSDGLPIWCRVTGSLANPGEPGDGLVWLFEDVTEKRQADRAMEALLREQA 390 Query: 559 ITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENI 618 + + + + I NP E++ G+ + LG + E Sbjct: 391 LIFERAPTGIAFL-RDRVIQRCNPSFERIFGYAPGQLLGQSTRVCF-ASEAAWREAGERA 448 Query: 619 YSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQL 678 Y+ ++ G + + L G V + +DVT R L Sbjct: 449 YAVADESGKFIGELEYCRADGTPIWCQVTGS-LLNPANPAEGYVWLFEDVTARRAAEEAL 507 Score = 209 bits (532), Expect = 7e-52, Method: Composition-based stats. Identities = 64/398 (16%), Positives = 128/398 (32%), Gaps = 6/398 (1%) Query: 283 MTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEEL 342 + + RA + E + IG+A V + + N +L + GYS +L Sbjct: 243 LYEDVSEKRASAAAMDALLREQTLIFEAAPIGIAFV-RDRIIQRCNPSLERIFGYSPGQL 301 Query: 343 RGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDG 402 G + + E+ ++ + +L+ E ++ E +Y +G +W + S + + Sbjct: 302 IGQSTRCFFASEEAWREKGERAQLLIDECGSFVGEVQYCKSDGLPIWCRVTGS-LANPGE 360 Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELY 462 + ED+ E ++ ++ + L+ L E GI I + ++ Sbjct: 361 PGDGLVWLFEDVTEKRQADRAMEALLREQALIFERAPTGIAFLR-DRVIQRCNPSFERIF 419 Query: 463 EIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANR 522 P + A + F E DG + Sbjct: 420 GYAPGQLLGQSTRVCFASEAAWREAGERAYAVADESGKFIGELEYCRADGTPIWCQVTGS 479 Query: 523 VLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNP 582 +LN E + + D+T + EAL + + D+ + I N Sbjct: 480 LLNPANPAEGYVWLFEDVTARRAAEEALVESLWEQQLIFDNAMIGI-SYHRNRMILRCNR 538 Query: 583 VAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSY 642 E++ G+ + G P + + + +Y S + +++ R G Sbjct: 539 RCEEIFGYLEGGLAGQPTRVLF-ASDEAWEAVGRQVYGESASGETFDGELLYQRRDGTPI 597 Query: 643 DVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSY 680 VH + S + DVT R + L Sbjct: 598 WVHAIGRTIGESADSET-WIWAYADVTAQRAAEQALRQ 634 Score = 207 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 61/423 (14%), Positives = 138/423 (32%), Gaps = 24/423 (5%) Query: 283 MTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEEL 342 + + R + + E + G+A + + + N + + GY+ +L Sbjct: 368 LFEDVTEKRQADRAMEALLREQALIFERAPTGIAFL-RDRVIQRCNPSFERIFGYAPGQL 426 Query: 343 RGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDG 402 G + + E ++ + ++ E + E Y +G +W + SL+ + Sbjct: 427 LGQSTRVCFASEAAWREAGERAYAVADESGKFIGELEYCRADGTPIWCQVTGSLL-NPAN 485 Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELY 462 ++ ED+ + E+ + + L + IGI + I ++R E++ Sbjct: 486 PAEGYVWLFEDVTARRAAEEALVESLWEQQLIFDNAMIGI-SYHRNRMILRCNRRCEEIF 544 Query: 463 EIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANR 522 E + + + S F E +DG R Sbjct: 545 GYLEGGLAGQPTRVLFASDEAWEAVGRQVYGESASGETFDGELLYQRRDGTPIWVHAIGR 604 Query: 523 VLNKEGEVERLLGINMDMTEVKQLNEALFQE------------------KERLHITLDSI 564 + + + E + D+T + +AL Q + +++I Sbjct: 605 TIGESADSETWIWAYADVTAQRAAEQALRQSHLELEQRVADRTLELSQQLHFMRQLIEAI 664 Query: 565 GEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTS 624 V + N ++ G +++E +G + V D ++ Sbjct: 665 PGPVFYKSQEGRYLGCNQAFLELIGKSRDEVVGATVYDVAPADLADRYKAADD--ELLAR 722 Query: 625 RSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSAS- 683 + + + G DV + + G V V+ D+TE ++M +L +A+ Sbjct: 723 LGSQVYEARVLDADGHYRDVIFHKATYGKPGENGGGLVGVMLDITERKRMEARLLQAATV 782 Query: 684 HDA 686 D+ Sbjct: 783 FDS 785 Score = 171 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 55/394 (13%), Positives = 122/394 (30%), Gaps = 20/394 (5%) Query: 298 SESETHFRNAMEYSAIGMALVGTEGQWLQ-TNKALCQFLGYSQEELRGLTFQQLTWPEDL 356 + ++ +++S G+A+V T + + N + G+ L G + P+D Sbjct: 8 EQQLLEYKAILDHS--GIAVVCTRSRLVYRCNPRAEELFGWPAGTLVGQ-LDAVFLPDDA 64 Query: 357 NKDLQQVEKLISGE---INTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIED 413 + + + + +E R R+G A L + L + + D Sbjct: 65 S--CDALRGTVRPQLRVGKIVDLETRLARRDGSTFVAHLIARAI-DPAAPRLGTVWIVRD 121 Query: 414 INELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQ 473 + + T + +L+ L E GI + I ++R EL Sbjct: 122 VTQEVLTRDTSARLLREQQLIFENAETGIVILR-ERIIQRCNRRFAELLGYAADELVGQS 180 Query: 474 VWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERL 533 E + ++ + + ++G + ++N+ E Sbjct: 181 TRLYYPSEEAWLETGRRAYAAIAETGIYHGDTIFRRRNGESFCCHITGSMMNRANPDEGY 240 Query: 534 LGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQE 593 + + D++E + A+ + ++ + + I NP E++ G++ Sbjct: 241 VWLYEDVSEKRASAAAMDALLREQTLIFEAAPIGIAFV-RDRIIQRCNPSLERIFGYSPG 299 Query: 594 EALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSIT-PLS 652 + +G + E + +V G + + Sbjct: 300 QLIGQSTRCFF-ASEEAWREKGERAQLLIDECGSFVGEVQYCKSDGLPIWCRVTGSLANP 358 Query: 653 TLDGSNIGSVLVIQDVTESRKM----LRQLSYSA 682 G G V + +DVTE R+ L A Sbjct: 359 GEPGD--GLVWLFEDVTEKRQADRAMEALLREQA 390 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 44/265 (16%), Positives = 89/265 (33%), Gaps = 14/265 (5%) Query: 425 QQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDR 484 +Q + + GI + + + R EL+ P LP+D Sbjct: 8 EQQLLEYKAILDHSGIAVVCTRSRLVY-RCNPRAEELFGWPAGTLVGQ--LDAVFLPDDA 64 Query: 485 --QHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTE 542 +R L+ LE R+ +DG + L R ++ + I D+T+ Sbjct: 65 SCDALRGTVRPQLRVGKIVDLETRLARRDGSTFVAHLIARAIDPAAPRLGTVWIVRDVTQ 124 Query: 543 VKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLT 602 + + + ++ +V + I N ++ G+ +E +G Sbjct: 125 EVLTRDTSARLLREQQLIFENAETGIVIL-RERIIQRCNRRFAELLGYAADELVGQSTR- 182 Query: 603 VLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSV 662 + + + Y+A D + R+G S+ H + + + + G V Sbjct: 183 LYYPSEEAWLETGRRAYAAIAETGIYHGDTIFRRRNGESFCCHITGS-MMNRANPDEGYV 241 Query: 663 LVIQDVTESRKMLRQLSYSASHDAL 687 + +DV+E R + DAL Sbjct: 242 WLYEDVSEKRASAAAM------DAL 260 >UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncultured bacterium RepID=C5JAR6_9BACT Length = 922 Score = 955 bits (2470), Expect = 0.0, Method: Composition-based stats. Identities = 168/827 (20%), Positives = 315/827 (38%), Gaps = 31/827 (3%) Query: 286 VMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGY-SQEELRG 344 + R + ESE FR +E + + + G + N+ +G + +L G Sbjct: 101 DISERRNAEVRLRESEERFRRLVELAPDAILVH-QGGTIVYANRQAQIMMGAPTPTDLIG 159 Query: 345 LTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTP 404 + ++ P + ++++ L GE +E R +G V + + + G Sbjct: 160 RSIIEIIDPACHDLVAKRLKLLARGEQLPL-VEMRLVRLDGGQVEVESTMGMTTY--GGH 216 Query: 405 LYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI 464 + DI+ K+ E +Q + + + ++ + I SW++ +Y Sbjct: 217 RAMQSVWRDISARKQAEAASQAAKDHFLAFARSTPDALIAFDEEGRIVSWNEGAEAVYGF 276 Query: 465 PPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLE------FRITVKDGIRHIRA 518 + ++ + R + + Sbjct: 277 RQDEILG-SPLSRLIPERYHAINAAWVKRMAKDRGRHNFTGKPIEAHGLRKSGEEFPVEY 335 Query: 519 LANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKIT 578 R + D+++ KQ E L L ++ VV + I Sbjct: 336 SVGRWREAGRNFFSVAA--RDISKRKQSEEKL----RHLSQAVEQSPADVVITNAEGIIQ 389 Query: 579 FMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRS 638 ++NP +++G+ +E +G + + L ++++ ++ +++ + Sbjct: 390 YVNPRFSQVTGYASKEVIGKKPSILK--SGRTPAALYDSLWETISAGKEWRGELMNRKKD 447 Query: 639 GGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEK 698 G + H I+P+ G + V +D++ ++ +L A++DALT L NR Sbjct: 448 GSLFWQHAIISPIRDNSGVITHYISVKEDISIRKEYEERLVRQANYDALTGLPNRILAMD 507 Query: 699 QLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLA 758 +L+ + +++ AL+ +DLD FK VND+ GHAAGD LL+E A ++ LR D +A Sbjct: 508 RLKQAIAQAQRYNRKVALMLLDLDDFKKVNDTLGHAAGDLLLKEAALRLVDCLREGDTVA 567 Query: 759 RLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQ 817 RLGGDEF LLLPD + SA +A +I++A N F G + S GI + D+ Sbjct: 568 RLGGDEFVLLLPDLTDTSSAEVVAEKILAACNQ-PFDVGGHEAYIAGSIGIAIFPDDERD 626 Query: 818 AAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHG 877 +M AD A Y SK G+G + P+ A E M + I+ N++ + Sbjct: 627 PILLMRNADAAMYRSKREGKGVFRYFTPEMNARALEHMRMESQLR-HAIERNEMKVHYQP 685 Query: 878 VASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAK 936 + R + +L W + + + F + L ++ V + AA Sbjct: 686 LVD--SGTGRLVGAEALLRWSNPVLGEVSPEQFIPLAEETGLILSIGAWVLRTACRDAAS 743 Query: 937 AVASKG-ISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES--- 992 I +++ +S TLV + L S LPP L L + +L+H + Sbjct: 744 WQRPDHEIFVAVNISGKQFQKRTLVEIVRSSLNESGLPPACLELELTESVLLEHTQETLS 803 Query: 993 -VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQG 1051 +Q+L G + G + L+ D L +D ++ N D L+ I Sbjct: 804 IIQELESLGVGFAIDDFGTGFSSISYLRRFPFDTLKIDRSFIKDLGDNEGDADLVKSIIA 863 Query: 1052 HAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 A + +K + V + L G + G + + P Sbjct: 864 MANSMSLKVVGEGVETHGQREFLRLSGCHIAQGWLYSRPIPGKDFQE 910 Score = 175 bits (445), Expect = 9e-42, Method: Composition-based stats. Identities = 62/380 (16%), Positives = 130/380 (34%), Gaps = 25/380 (6%) Query: 314 GMALVGTEGQWLQTNKALCQFLGYSQEELR-GLTFQQLT-----WPEDLNKDLQ---QVE 364 G+++ + + N + + + G F+ E + D++ + Sbjct: 2 GISVFDADLNMVYFNTQFLKLYKFPPGLAQPGTPFETFIRYNAEHGEYGDCDIETEVRFR 61 Query: 365 KLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVN 424 + + +++E+ +G V + S + FI DI+E + E Sbjct: 62 VERARKFEAHTVERT--TPDGRV--LEIQGSPLPGG-----GFITTYTDISERRNAEVRL 112 Query: 425 QQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDR 484 ++ ER E I I +++ + P + E + P Sbjct: 113 RESEERFRRLVELAPDAILV-HQGGTIVYANRQAQIMMGAPTPTDLIGRSIIEIIDPACH 171 Query: 485 QHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVK 544 K ++ + +E R+ DG + + + G + + D++ K Sbjct: 172 DLVAKRLKLLARGEQLPLVEMRLVRLDGG-QVEVESTMGMTTYGGHRAMQSVWRDISARK 230 Query: 545 QLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVL 604 Q A K+ S +A++ D +I N AE + G+ Q+E LG PL ++ Sbjct: 231 QAEAASQAAKDHFLAFARSTPDALIAFDEEGRIVSWNEGAEAVYGFRQDEILGSPLSRLI 290 Query: 605 HITFGDNGPLMENIYSADTSRSAIEQ---DVVLHCRSGGSYDVHYSITPLSTLDGSNIGS 661 + + D R + +SG + V YS+ G N S Sbjct: 291 PERYHAINAAWVKRMAKDRGRHNFTGKPIEAHGLRKSGEEFPVEYSVGRWR-EAGRNFFS 349 Query: 662 VLVIQDVTESRKMLRQLSYS 681 V +D+++ ++ +L + Sbjct: 350 VA-ARDISKRKQSEEKLRHL 368 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 37/277 (13%), Positives = 95/277 (34%), Gaps = 14/277 (5%) Query: 283 MTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEEL 342 + + A + ++ HF + + EG+ + N+ G+ Q+E+ Sbjct: 222 VWRDISARKQAEAASQAAKDHFLAFARSTPDALIAFDEEGRIVSWNEGAEAVYGFRQDEI 281 Query: 343 RGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSM-----EKRYYNRNGDVVWALLAVSLV 397 G +L PE + K ++ + ++ E ++G+ +V Sbjct: 282 LGSPLSRLI-PERYHAINAAWVKRMAKDRGRHNFTGKPIEAHGLRKSGEEFPVEYSVGRW 340 Query: 398 RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKR 457 R +F DI++ K++E+ + ++ A E + + I + R Sbjct: 341 REAGRN--FFSVAARDISKRKQSEEKLR----HLSQAVEQSPADVVITNAEGIIQYVNPR 394 Query: 458 MFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHI- 516 ++ + + +++ + ++ E KDG Sbjct: 395 FSQVTGYASKEVIGKKPSILKS-GRTPAALYDSLWETISAGKEWRGELMNRKKDGSLFWQ 453 Query: 517 RALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQE 553 A+ + + + G + + + D++ K+ E L ++ Sbjct: 454 HAIISPIRDNSGVITHYISVKEDISIRKEYEERLVRQ 490 >UniRef50_Q2BQI6 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQI6_9GAMM Length = 955 Score = 952 bits (2461), Expect = 0.0, Method: Composition-based stats. Identities = 164/831 (19%), Positives = 323/831 (38%), Gaps = 24/831 (2%) Query: 281 NIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQE 340 I + K + ESE +R +E I + G+ + N++ C+ G + E Sbjct: 128 LIQAIDKTDKAIAEKALRESEQRYRGVVEDFPIMICTYKPGGEIIFVNQSYCKLFGRTSE 187 Query: 341 ELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHT 400 +L G F L D + + L + + T+ E R ++ W + + Sbjct: 188 DLVGSNFLDLIPEGDRPALISNISGLNTSK-PTFVNEHRVILPGDNIGWQRWTNRAIFNR 246 Query: 401 DGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEW--ELKPNIFSWDKRM 458 G + + EDI + E+ + +++ ++ + R Sbjct: 247 QGEIESYQSIGEDITQRMIQERALESSEAQLSTLIGNLPGVAFQCLNNRNWTMLYLSDRC 306 Query: 459 FELYEIPPHIKP--NWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHI 516 E++ + + + + P R++ +++SL++++P+K+ +++ G Sbjct: 307 EEIFGYTAESLIKSRYCSYAQLIEPGYREYVWAAVQNSLKTQTPYKVLYKLKHSSGESRW 366 Query: 517 RALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMK 576 R ++ + + G D+TE + L Q S GE V D Sbjct: 367 MEEQGRGVSTDSTGLTIEGYIEDVTERIEAENRLNQ----AAAVFRSTGEGVAITDQNGT 422 Query: 577 ITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHC 636 I +N K++G+ ++E +G + + + EN++ +V Sbjct: 423 IVDVNEAFTKITGFDRDEVIGKNTRILQ--SGKHDIAFYENMWEQIQKHGHWRGEVWNRA 480 Query: 637 RSGGSYDVHYSITPLSTLDGS-NIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRAS 695 +SG Y +I+ + G G V V D+T ++ +L + A +DALT L NR Sbjct: 481 KSGTIYPEILTISAIDFKKGQQPSGYVGVFADITSLKETEARLDHLAHYDALTELPNRLL 540 Query: 696 FEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSD 755 F ++L L + A++F+DLDRFK +ND+ GH GD LL E+AS + ++R D Sbjct: 541 FRERLIHSLLMSERKKTKVAVLFLDLDRFKNINDTLGHGVGDILLAEIASRLRHVVRMGD 600 Query: 756 VLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDN 814 + R+ GDEF L+L D +V I +I+S + + ++ AS G+ + DN Sbjct: 601 TVGRISGDEFCLILEDIQDVTDVVPIVEKILSVFSQT-IQINSHMLQISASIGVAISPDN 659 Query: 815 NHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMML 874 ++ A ++S +D A Y +K GR Y + E + + + ++++Q + Sbjct: 660 SNDADALLSFSDSAMYEAKEAGRNTYKFYTAEMTQQALEHSFVQSALR-DALEQSQFFVT 718 Query: 875 AHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQ 933 RI + + + +L W E +I +F + L L + +Q Sbjct: 719 YQPQ--LRIKDYSMVGVEALVRWQHPERGLIPPDSFIPIAENSGLIRELGAWILRTACEQ 776 Query: 934 AAKAVASKG--ISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE 991 + + + I + +S L + ++ L+ + P L L + I+ + Sbjct: 777 GVQWLNEQVNFGRIYVNVSATQLHDESFTEAVIMCLKETGFPAEKLGLEVTESFIMKDPQ 836 Query: 992 S----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLIT 1047 + + G + + G + LK D L +D ++ + D + Sbjct: 837 HAINVLSSFKEIGIELAIDDFGTGYSSLSYLKQLPIDKLKIDQSFIRDIPDDPNDMAIAE 896 Query: 1048 IIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 + + L ++ IA V + D L + G + A D Sbjct: 897 AVIAMGKALNLEVIAEGVESQIQADFLLDKECTEVQGYLYAHPLTADAFSE 947 Score = 186 bits (472), Expect = 6e-45, Method: Composition-based stats. Identities = 65/399 (16%), Positives = 147/399 (36%), Gaps = 17/399 (4%) Query: 295 KHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQ---LT 351 + + S F ++ MA++ +G+ + N+ GY++E+ G F + Sbjct: 12 EKLKNSSDLFEIVFDHQFQFMAILEPDGRVISVNQVALSQQGYTREDFVGRYFWESASWR 71 Query: 352 WPEDLNKDLQ-QVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQ 410 D + +++ ++ + Y +G + A + +DG ++ Q Sbjct: 72 HLPDWEAIWKKRLKAAYENRSPIFTDDV-YEAHDGSIRHADAVTIALFDSDGKLNGYLIQ 130 Query: 411 IEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKP 470 D + E+ ++ +R E I I ++ I ++ +L+ Sbjct: 131 AIDKTDKAIAEKALRESEQRYRGVVEDFPIMICTYKPGGEIIFVNQSYCKLFGRTSEDLV 190 Query: 471 NWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVK-DGIRHIRALANRVLNKEGE 529 + + + DR I S+ F E R+ + D I R + N++GE Sbjct: 191 G-SNFLDLIPEGDRPALISNISGLNTSKPTFVNEHRVILPGDNIGWQRWTNRAIFNRQGE 249 Query: 530 VERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAV---VCIDMAMKITFMNPVAEK 586 +E I D+T+ AL + +L + ++ V + + +++ E+ Sbjct: 250 IESYQSIGEDITQRMIQERALESSEAQLSTLIGNLP-GVAFQCLNNRNWTMLYLSDRCEE 308 Query: 587 MSGWTQEEAL-GVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVH 645 + G+T E + I G + + ++ +++ + L SG S + Sbjct: 309 IFGYTAESLIKSRYCSYAQLIEPGYREYVWAAVQNSLKTQTPYKVLYKLKHSSGESRWME 368 Query: 646 YSITPL-STLDG-SNIGSVLVIQDVTESRKMLRQLSYSA 682 + + G + G + +DVTE + +L+ +A Sbjct: 369 EQGRGVSTDSTGLTIEGYI---EDVTERIEAENRLNQAA 404 >UniRef50_C6XCZ6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XCZ6_METSD Length = 869 Score = 951 bits (2460), Expect = 0.0, Method: Composition-based stats. Identities = 191/883 (21%), Positives = 356/883 (40%), Gaps = 36/883 (4%) Query: 223 LMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANI 282 L ++A+R+P + L + + +LL + L ILL A + Sbjct: 8 LRYAAIRIPLIYCVFAVLWIMASDQTL-----ALLLPEAASITHFQTLKGLLFILLTAAL 62 Query: 283 MTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEEL 342 + +++ R+ + S + + ++ + L +G+ + N + GY+++++ Sbjct: 63 LYHLIH-----RQQLLAS--RYNSLTVHANDSILLFDHQGKLVDANDRALRMYGYTRDQM 115 Query: 343 RGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDG 402 + + +QL D D + L + N E + + +G ++ L++ G Sbjct: 116 QHIHARQLLP--DAASDWRSCF-LAEAQHNGIIFESEHKHADGSTFSVEVSACLLK--IG 170 Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELY 462 Y A + DI E R + ++ + + + IG WE++++ I SW + + ++ Sbjct: 171 GSDYIQAIVRDITERLRVVEKLRESEQLLAHMSAIAHIGGWEFDVETGIGSWTREVAHIH 230 Query: 463 EIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANR 522 + + + E R+ E I+ ++ P+ LE + GIR Sbjct: 231 GVEFKDNISAEFGLGFYEAESREKIEAAIQQAIDHGKPYDLELELVTARGIRKWVRTVCT 290 Query: 523 VLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNP 582 +G V +L G D+++ K + + + ++ EA++ +D +I +NP Sbjct: 291 PHIIDGRVLKLQGSFQDISDRKVAEDKM----RLATLVFENSSEAIMVVDAESQILSVNP 346 Query: 583 VAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSY 642 +M+G+T +E +G + + + E ++ S + +V ++G SY Sbjct: 347 AFTEMTGYTAQEVVGKTPKIL--ASGKQDRKFYEEMWHLLDSNGKWQGEVWNRRKNGESY 404 Query: 643 DVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRI 702 +I + G I V + D+T++++ + A+ D LT L NR +L Sbjct: 405 AEWLTIDTIYNEHGEVIRRVALFSDITKNKQNQEVIWRQANFDQLTGLPNRRMLHDRLNQ 464 Query: 703 LLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGG 762 + + HQ A++F+DLDRFK VND+ GH GD LL+E A +L +R D +ARLGG Sbjct: 465 EILKADRNHQMLAVLFLDLDRFKEVNDTYGHLMGDQLLQESAHRLLHSVRECDTVARLGG 524 Query: 763 DEFGLLLPDCNVESARF-IATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEV 821 DEF ++L + IA I+ D F + + V S GIT+ ++ + + Sbjct: 525 DEFVVILSGLQDKDVVQDIAQSILKKF-DTPFQLDNDLTHVSVSIGITIYPEDGNAGEVL 583 Query: 822 MSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASP 881 AD A Y +KN GR R + + A R +S D + Q + + Sbjct: 584 FKNADQAMYVAKNNGRNRYSYFTASMQAHAQNRMRLSNDL-HLALPGQQFELYYQPIV-- 640 Query: 882 RIPEARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS 940 + + +L W +I F + L + VF+E +Q + + Sbjct: 641 ELATGQVHKAEALLRWQHPTRGMIPPDNFIPLAEETGLIVDIGNWVFYEAARQVKRLQSL 700 Query: 941 KG--ISISLPLSVAGLSSA-TLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQK-- 995 IS+ S + + L + LP + + + I ++ ES+ Sbjct: 701 HHASFQISINKSPVQFHNETHGHEAWISFLLMNDLPRQSIVVEITEGLLMHTDESISAQL 760 Query: 996 --LRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHA 1053 R AG ++ L G + LK DYL +D N+ N D L I A Sbjct: 761 LGFRDAGVQVALDDFGTGYSSLSYLKKFDIDYLKIDRIFVRNLSRNSSDMALCEAIVMMA 820 Query: 1054 QRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 +L +K IA + + L IG D G + + P Sbjct: 821 HKLDIKVIAEGIETEEQRELLQQIGCDFGQGYLFSPPLPAPAF 863 >UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Bacteria RepID=B1XZA8_LEPCP Length = 1147 Score = 951 bits (2458), Expect = 0.0, Method: Composition-based stats. Identities = 189/877 (21%), Positives = 336/877 (38%), Gaps = 28/877 (3%) Query: 231 PRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAF 290 P + + + + +L + + +H + ++ Sbjct: 280 PLLGIDGRATGIISVGRDVSRERHNLRLLEQAHRRNHELLAEA---ERSRLALLSLLEDQ 336 Query: 291 RAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQL 350 + ++ ++ SE H R + + L +G + + L +E++ G L Sbjct: 337 QLGQQALAASERHLRAVVAALPDLIFLFDADGVIVDLWASQQDKLLMPREQVIGRAIADL 396 Query: 351 TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQ 410 P L + ++++ + E +G+ +R +A Sbjct: 397 LPPSLTATALHHIARVLAEDAAQI-FEYTLPLPDGE------HGFEMRMARAGSREVLAI 449 Query: 411 IEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKP 470 DI + Q+ + LA + G G+W+W+L + S+ L P + Sbjct: 450 ARDITAERDARAALQRSEASLRLAVDGSGDGLWDWDLITDKISFGAAYARLLRYPGNDLA 509 Query: 471 NWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGI-RHIRALANRVLNKEGE 529 + E + P+DR + +R+S++ +PF +R+ DG R + + G Sbjct: 510 RDFRFRERLHPDDRDRSIAAVRNSIEYGTPFVATYRMRCFDGEYRWFQGRGMCHRDAHGT 569 Query: 530 VERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSG 589 +R G+ D+T+ Q E L DS E V+ D +I +N + G Sbjct: 570 PQRFSGVLTDLTDRLQAEERL----RLAAQVFDSTQEGVMITDARRRIVSVNRAFTTLLG 625 Query: 590 WTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSIT 649 +T+ E LG + + + E + + + ++ + G SI+ Sbjct: 626 YTETEVLGQTPRML--SSGRHDRDFYEAMQAQLDHTGLWQGEIWNRHKDGSPVPELLSIS 683 Query: 650 PLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNS 709 + G V V D+T ++ +L + A HD LTHL NR F +L L Sbjct: 684 AVRDPHGQVTHYVGVFTDITHLKESEARLEFLAHHDPLTHLPNRLLFNNRLDQALHQAER 743 Query: 710 THQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLL 769 +R A++ +DLDRFK +NDS GH AGD LL+ +A + LR SD LARLGGDEF LL+ Sbjct: 744 EGRRLAVLLLDLDRFKDINDSYGHLAGDELLKYVAQRLTQRLRQSDTLARLGGDEFALLM 803 Query: 770 PDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIA 828 D + + A +A+ ++S +++ EG VG S GI + D+ ++ AD A Sbjct: 804 HDLRHDDDAARLASELLSGLSEPWRSSEGVEVSVGVSIGICIYPDHGRTPQTLLQGADAA 863 Query: 829 CYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARN 888 Y +K GRG Y + ER + R + + QL++ R R Sbjct: 864 LYRAKGDGRGVYRYYADEMTRIARERLHIEA-RLRRALADGQLLLHYQPQVDLR--SGRI 920 Query: 889 LWLISLKLWS-CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA--VASKGISI 945 + +L W E +I F L + V E +QA +++ Sbjct: 921 IGAEALVRWQDPEQGLIPPVRFIPVAEATGLIGEIGAWVLGEACRQARAWLDAGLPALTV 980 Query: 946 SLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAIL----DHAESVQKLRLAGC 1001 ++ +S A L +++ L + LPP L L + A++ + + +Q+LR G Sbjct: 981 AVNVSPRQFHQADLATQVMQVLVETGLPPTHLELELTEGALMEREAEALQVLQRLRGLGV 1040 Query: 1002 RIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTI 1061 + + G SLK D L +D ++ + D + I LG+ + Sbjct: 1041 GVAIDDFGTGYSSLASLKRFPIDVLKIDRSFITDIPDDPDDMEIAAAIIAMGHSLGILVL 1100 Query: 1062 AGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 A V + L D G + + P Sbjct: 1101 AEGVETAEQLAFLQQRNCDRYQGFLRSRPLPAQAFEQ 1137 Score = 193 bits (492), Expect = 3e-47, Method: Composition-based stats. Identities = 81/485 (16%), Positives = 170/485 (35%), Gaps = 57/485 (11%) Query: 232 RMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFR 291 + A L ++ + ++A W + LL A++ ++ Sbjct: 2 QRAAGGATLILLLGTAWLVAG------------PQPASWFTAIQTLLCASLAGWLIRRAA 49 Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 ++ ++ + + +A+G++L +G+ + N+ + +G + EE + L FQ +T Sbjct: 50 RAQEQAEQAHKRVADVVADAAVGISLTALDGRLTEVNRRFAEIVGRTVEETQRLRFQDIT 109 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 P+DL DL +V L++G I+ Y MEKRY + +W L VSL R DG P FI+ + Sbjct: 110 HPDDLAADLDKVADLLAGRIDRYRMEKRYLRPDSSTIWVTLTVSLARGADGQPRQFISVV 169 Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPN 471 +DI +K+ E + ++ ++ + +L + L + Sbjct: 170 QDITAVKQAEGDLLRQRRQLQQIIQSIPDCVAVRDLDGRYLLANPAAERLIGLSEAEICG 229 Query: 472 WQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA-NRVLNKEGEV 530 + PE A + R +L + E T DG LA + +L +G Sbjct: 230 RTLEQIYPEPE-AGQARRADRLALSQNGLVRREASYTAADGSVATVDLAISPLLGIDGRA 288 Query: 531 ERLLGINMDMTEVKQ-----------------------------------LNEALFQEKE 555 ++ + D++ + +AL + Sbjct: 289 TGIISVGRDVSRERHNLRLLEQAHRRNHELLAEAERSRLALLSLLEDQQLGQQALAASER 348 Query: 556 RLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLM 615 L + ++ + + D I + + +E+ +G + +L + + Sbjct: 349 HLRAVVAALPDLIFLFDADGVIVDLWASQQDKLLMPREQVIGRAIADLLPPSL--TATAL 406 Query: 616 ENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKML 675 +I +A + L G + + + + +D+T R Sbjct: 407 HHIARVLAEDAAQIFEYTLPLPDGE------HGFEMRMARAGSREVLAIARDITAERDAR 460 Query: 676 RQLSY 680 L Sbjct: 461 AALQR 465 Score = 143 bits (362), Expect = 4e-32, Method: Composition-based stats. Identities = 51/272 (18%), Positives = 104/272 (38%), Gaps = 6/272 (2%) Query: 414 INELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQ 473 I R ++ +Q +R+ +GI L + ++R E+ + Sbjct: 45 IRRAARAQEQAEQAHKRVADVVADAAVGISLTALDGRLTEVNRRFAEIVGRTVEETQRLR 104 Query: 474 VWYECVLPEDRQHAEKVIRDSLQSR-SPFKLEFRITVKDG-IRHIRALANRVLNKEGEVE 531 + + P+D + D L R +++E R D + + +G+ Sbjct: 105 -FQDITHPDDLAADLDKVADLLAGRIDRYRMEKRYLRPDSSTIWVTLTVSLARGADGQPR 163 Query: 532 RLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWT 591 + + + D+T VKQ L +++ +L + SI + V D+ + NP AE++ G + Sbjct: 164 QFISVVQDITAVKQAEGDLLRQRRQLQQIIQSIPDCVAVRDLDGRYLLANPAAERLIGLS 223 Query: 592 QEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPL 651 + E G L + + + A + + ++ G V +I+PL Sbjct: 224 EAEICGRTLEQIYPEPEAGQARRADRL--ALSQNGLVRREASYTAADGSVATVDLAISPL 281 Query: 652 STLDGSNIGSVLVIQDVTESRKMLRQLSYSAS 683 +DG G + V +DV+ + +L A Sbjct: 282 LGIDGRATGIISVGRDVS-RERHNLRLLEQAH 312 >UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P464_9PROT Length = 1347 Score = 949 bits (2453), Expect = 0.0, Method: Composition-based stats. Identities = 166/839 (19%), Positives = 306/839 (36%), Gaps = 45/839 (5%) Query: 279 PANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVG---TEG-----QWLQTNKA 330 + + + + E +R+ + G+A +G +++ N A Sbjct: 521 LIVALVDDITQRKQTELALRAKEATYRSLFDNMLNGVAHYRMIFRDGAPVDYEFIAVNPA 580 Query: 331 LCQFLGYSQEELRGLTFQQLTWP--EDLNKDLQQVEKLIS-GEINTYSMEKRYYNRNGDV 387 + G +++ G ++ E LQ K+ GE + Y + G Sbjct: 581 FGKTTGL--KDVVGRKVSEVIPGYCEANQDSLQVFGKVAQTGEACHWE---HYLSALGKW 635 Query: 388 VWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWEL 447 + P F+ EDI E K+ E + +R GI + Sbjct: 636 FSFSIYSPA-------PGEFVVVSEDITERKQAETALRDSEDRFRSIFNNAIDGILLADS 688 Query: 448 KPNIFSW-DKRMFELYEIPPHIKPNWQVWYECVLPE-DRQHAEKVIRDSLQSRSPFKLEF 505 F + + + E + PE D+++ ++ S Sbjct: 689 GTRKFIMGNSAIARMLGYSNEELLQLGT--EDIHPEQDKEYYIAQFAMMVRGESTLSSNA 746 Query: 506 RITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIG 565 + KDG + L G+ L+G D+TE KQ +AL + +S Sbjct: 747 VVKRKDGSVFYADIKASPLRI-GDKVYLMGFFRDITERKQTEDAL----RQGAAVFESSH 801 Query: 566 EAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSR 625 ++ D+ I N +SG+T+ E LG + + + +++ Sbjct: 802 NGIIITDLDGHILAANQAYADISGYTESELLGQNPRIL--NSGRQSRDFYRKMWANIKEA 859 Query: 626 SAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHD 685 + + ++ ++G Y +++ + G V + D+++ R+ + + A +D Sbjct: 860 GSWQGELWNRRKNGEIYPTWLAVSAVRNDQGKATHYVGISSDLSQLRQTEAEREHLAHYD 919 Query: 686 ALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELAS 745 LT L NR L L H + ++++DLDRFK +NDS G+ GD LL L Sbjct: 920 PLTDLPNRLLLRSHLTHALAQAKRHHNQVGVLYLDLDRFKNINDSLGYQVGDELLVTLTE 979 Query: 746 LMLSMLRSSDVLARLGGDEFGLLLPDCN-VESARFIATRIISAVNDYHFIWEGRVHRVGA 804 + +RS D+LARLGGDEF L+L N E + +A ++ + + R +GA Sbjct: 980 RLTMHMRSEDLLARLGGDEFLLVLEHINEPEDSAIVARSLLETLAQPFVLHGEREIFIGA 1039 Query: 805 SAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWR 864 S GI++ ++ A +++ AD A + +K GR Y + A +E + + Sbjct: 1040 SIGISIFPNDGDSAEQLIQHADAAMHQAKTLGRNTYHFYTEDLSRASNEHLELE-NRLRH 1098 Query: 865 MIKENQLMMLAHGVASPRIPEARNLWLISLKLWS-CEGEIIDEQTFRRSFSDPALSHALD 923 I NQL + I + +L W E ++ F + L A+ Sbjct: 1099 AITANQLRVYYQPQVD--IATGHIIGAEALVRWQDPERGLVQPGQFIPLAEETGLIGAIG 1156 Query: 924 RRVFHEFFQQAAKA--VASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLII 981 V E Q + +++++ LS + + + L + P L L + Sbjct: 1157 EWVLKETCLQGMRWIDAGLPFLTLAVNLSPHQFLRGNIAGLISKVLAETGFPADRLELEL 1216 Query: 982 PAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQ 1037 A++ E + LR R+ + G + LK D L +D ++ Sbjct: 1217 TESALMQQGEDVIKMLHLLRAQDIRLAIDDFGTGYSSLSYLKRFPLDILKIDKSFVDDIP 1276 Query: 1038 GNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 + D + I LG K +A V ++ L G DL G + + P + Sbjct: 1277 FHQDDMEIAATIIAMGHILGFKVLAEGVETREQLEFLQARGCDLYQGYLTSPPIPAEEF 1335 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 75/433 (17%), Positives = 162/433 (37%), Gaps = 32/433 (7%) Query: 269 PWLPFLLILLPANIMTMVMYAFRAERKHIS--------ESETHFRNAMEYSAIGMALVGT 320 WL + IL+ + + VM +R +++ E + + + IGMA+ Sbjct: 375 FWLGLVAILIVFVVTSAVMLIWRQQQRLHRMELANRSSEQDKQLKLFYDLPFIGMAITSP 434 Query: 321 EG-QWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKR 379 +W+ N LC LGYS+++L + LT P+D+ +L++ E++++GE + +++EKR Sbjct: 435 ATKRWVYANDRLCDMLGYSRDDLLKTAWIDLTHPDDVAGNLKEFERMVAGETDGFNIEKR 494 Query: 380 YYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGG 439 + ++G + L V R DG P +A ++DI + K+TE + + Sbjct: 495 FIRKDGSPITVNLDVKCTRRADGKPDLIVALVDDITQRKQTELALRAKEATYRSLFDNML 554 Query: 440 IGIWEWEL--------KPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVI 491 G+ + + + + + + + ++ +V Sbjct: 555 NGVAHYRMIFRDGAPVDYEFIAVNPAFGKTTGLKDVVGRKVSEVIPGYCEANQDSL-QVF 613 Query: 492 RDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALF 551 Q+ E ++ + + ++ D+TE KQ AL Sbjct: 614 GKVAQTGEACHWEHYLSALGKWFSFSIYSPA-------PGEFVVVSEDITERKQAETALR 666 Query: 552 QEKERLHITLDSIGEAVVCIDMAMK-ITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGD 610 ++R ++ + ++ D + N +M G++ EE L + + Sbjct: 667 DSEDRFRSIFNNAIDGILLADSGTRKFIMGNSAIARMLGYSNEELLQLGTEDI---HPEQ 723 Query: 611 NGPLM-ENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVT 669 + S + + V+ + G + +PL G + + +D+T Sbjct: 724 DKEYYIAQFAMMVRGESTLSSNAVVKRKDGSVFYADIKASPLRI--GDKVYLMGFFRDIT 781 Query: 670 ESRKMLRQLSYSA 682 E ++ L A Sbjct: 782 ERKQTEDALRQGA 794 >UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1G1_PELCD Length = 1061 Score = 945 bits (2444), Expect = 0.0, Method: Composition-based stats. Identities = 203/1074 (18%), Positives = 383/1074 (35%), Gaps = 98/1074 (9%) Query: 97 NIVEAVV--GAVLLRKLLPWYNPLQNLADWLRLALGSAIVPPLLGGVLVVLLTPGDDPL- 153 N+ A++ A+LL + RL + + L ++++L+P Sbjct: 3 NVFLALIQNAALLLAMAFIYDMMTSRYRLKHRLIVQICVGISLGLLSIILMLSPWQYIPG 62 Query: 154 -----RAFLIWVLSESIGALALVPLGLLFKPHYLLRHRNPRLLFESLLTLAITLTLSWLS 208 R+ L+ + GA+A L+ L + + ++ + + + W Sbjct: 63 IVFDTRSVLLGISGLFFGAVATSVAMLMAAAFRLFQGGAAAWIGVGVIFASGIVGIYWKY 122 Query: 209 MLYLPWPFTFIIVLLMWSAVRLPRM--EAFLIFLTTVMMVSLMMAADPSLLATPRTYLMS 266 SA +L F + + +M+ +++ + + Sbjct: 123 RNRK-------------SAEQLTWWQLYGFGVLVHLIMLAFMLLLPWQTAFRVLHHISLP 169 Query: 267 HMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQ 326 + P +L + ++ K + SE R A++ S G+ + + + Sbjct: 170 VLLIYPLATAMLGSLMLKRQ--RRDQISKALQTSEERLRMALKASKQGLYDLNVQSGNMI 227 Query: 327 TNKALCQFLGYSQEELRGLT--FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRN 384 N LGY + R + PED + L ++G+ + E R R Sbjct: 228 VNAEYALILGYDPQNFRETNGDWIARMHPEDRSAVLAVYRNYLAGKTEEFRAEFRQRTRC 287 Query: 385 GDVVWALLAVSLV-RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIG-- 441 G W L +V R T G PL + DI E +++E+ ++ E Sbjct: 288 GQWKWVLSMGKIVERDTHGQPLRMLGTFSDITERRQSEEQTRKAEREKADLLEEAQQARL 347 Query: 442 ----------------------------------IWEWELKPNIFSWDKRMFELYEIPPH 467 I + + I +++ ++ Sbjct: 348 TLQRLFEEQTLASAEIERTSRLLAEVLNAASEVSIIATDPRGIITVFNRGAEKMLGYSAE 407 Query: 468 IKPNWQVWYECVLP-----------EDRQHAEKVIRDSLQSRSPFKLEFRITV----KDG 512 + L DR K D + + E R + Sbjct: 408 EMVGRETPTVFHLASELQTRYTELGADRGTPIKDFADYMAHATTADAEHREWTYTSKQGE 467 Query: 513 IRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCID 572 + + + + + LGI D+TE K+ L +L ++ AV+ D Sbjct: 468 HISVSLVITAMRSPAHGIVGYLGIAQDITERKRQENTL----RKLSQVVEQSPTAVILTD 523 Query: 573 MAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDV 632 I + NP +++G++ E G + + + ++++ T+ + Sbjct: 524 PQGNIEYANPKFTQITGYSLTEVHGKNPRLLK--SGETSAEEYRDLWTTITAGREWHGEF 581 Query: 633 VLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLAN 692 + G + H SI+P+ G + + +D+T+ ++ QL + A+HD LT LAN Sbjct: 582 HNKRKDGSLFWEHASISPVRNDAGDISHFLAIKEDITDRKRYEEQLQHLATHDNLTGLAN 641 Query: 693 RASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLR 752 RA + +L + + + A + +DLDRFK +NDS GH+ GD LL+ A + +R Sbjct: 642 RALLQDRLEQSILFAKRSGRLVAALLLDLDRFKIINDSLGHSFGDRLLQIAADRLRESVR 701 Query: 753 SSDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLI 811 +D +ARLGGDEF +LL + N E +A +I+ + F R V AS GI++ Sbjct: 702 GADTVARLGGDEFVILLAEVANEEDVGKVAKKILDRITA-PFQIADREITVTASLGISIY 760 Query: 812 DDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQL 871 + ++ ADIA Y +K G +Y P+ E M D + R + +L Sbjct: 761 PQDGEDEETLIRNADIAMYQAKEEG-NAFRLYAPEMNIVVHEAMEMETDLR-RALDRGEL 818 Query: 872 MMLAHGVASPRIPEARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEF 930 ++ + + +L W +I F + L + V Sbjct: 819 LLHYQPKID--LDSGKITGAEALVRWQHPVRGMIAPGMFIPLAEETGLILPIGEWVLENI 876 Query: 931 FQQAAKA--VASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILD 988 Q + I+ LS + L+ + L+++ LPP LL L + I+ Sbjct: 877 CLQIKSWQTQGFPLVPIAANLSARQFRNDELIATIQRILQDTGLPPHLLELELTESMIMR 936 Query: 989 HA----ESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEM 1044 + E++Q+L G + L G N L+ D L +D ++V + Sbjct: 937 NVQTAAETMQELNALGVSLALDDFGTGYSSLNYLRRFPVDCLKIDRSFISDVADDPSAAA 996 Query: 1045 LITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 + T I A LG++ +A V ++ L D G + + ++ Sbjct: 997 VATSIIAIAHSLGLQAVAEGVETEEQLEFLRQCACDSYQGYLYSAPLAVEEFTA 1050 >UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=cellular organisms RepID=Q31GH8_THICR Length = 1466 Score = 941 bits (2432), Expect = 0.0, Method: Composition-based stats. Identities = 151/694 (21%), Positives = 283/694 (40%), Gaps = 24/694 (3%) Query: 416 ELKRTEQVNQQLMERITLANEAGGIGIWEWELKPN----IFSWDKRMFELYEIPPHIKP- 470 E K E Q+ ++R+ + I+++ L P+ ++E+Y + P Sbjct: 774 ERKIIEASRQEALDRLQKIADRLPGVIYQFRLMPDGTSSFPFASDALYEIYRVKPEDVTE 833 Query: 471 NWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVK-DGIRHIRALANRVLNKEGE 529 + +E + PED +K I +S + +P+ E+R+ K D +R + A +G Sbjct: 834 DSSKVFEVIHPEDVDDVQKSIEESAEHLTPWYQEYRVRFKNDDVRWLSGNAMPEKQPDGS 893 Query: 530 VERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSG 589 + G D+++ K+ + E + E ++ D KI +N ++SG Sbjct: 894 IL-WHGFITDISQHKKTEAQI----ELASKVFEQSREGIMITDSNQKILMVNEAFSEISG 948 Query: 590 WTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSIT 649 ++ EE LG + + + +N++ + + + ++ ++G + SI+ Sbjct: 949 YSVEETLGKTPRML--ASGRHSREFYQNVWKSIKEKGHWQGEIWNRRKNGEIFPEWLSIS 1006 Query: 650 PLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNS 709 G+ V + D+++ ++ ++ + A +D LT L NR +L + T + Sbjct: 1007 RGLDTSGNVTEYVGIFNDISKVKESEEKIKHLAHYDPLTGLVNRELLMDRLNHSISTADR 1066 Query: 710 THQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLL 769 + AL+FIDLD FK VND+ GH GD LL E+ +L +LR D +AR GGDEF ++L Sbjct: 1067 NNTPLALLFIDLDHFKNVNDTLGHQVGDQLLIEVGQRILKILRDEDTIARQGGDEFIVVL 1126 Query: 770 PDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIAC 829 PD A +A +I+ +++D + + S GI + + A ++ AD A Sbjct: 1127 PDTGENGAVHVAEKILESISDQ-LNLKPYKLFITPSIGIAVYPQDGKDADSLLKNADTAM 1185 Query: 830 YASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNL 889 Y +KN GR + + A S + + + + Q + + + Sbjct: 1186 YQAKNDGRNVYRFFTMEMQAHSSRIMQIESALRV-ALFDQQFELYYQPQTCAK--SGSII 1242 Query: 890 WLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA--VASKGISIS 946 + +L W E + Q F A+ V +Q I ++ Sbjct: 1243 GVEALIRWNHPEMGPVSPQEFIPVAEQSGQILAIGWWVLRTAIRQIKIWSEHGKPCIKVA 1302 Query: 947 LPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCR 1002 + LS L +++ LE + P L L + + + E+ + KL G + Sbjct: 1303 VNLSAVQFRYEDLPKQVMKILEEEGVSPEFLELELTESVAMANPEAVIEMMDKLVGHGIK 1362 Query: 1003 IVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIA 1062 + + G + LK L +D ++ + D +I I ++ LG+KTIA Sbjct: 1363 MSIDDFGTGYSSLSYLKRFKVSKLKIDQSFIRDLAVDSDDRSIIEAIISLSKALGLKTIA 1422 Query: 1063 GPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 V +D L D I G + A + Sbjct: 1423 EGVETQAQLDFLQEKQCDEIQGFYYSKALTPEAF 1456 Score = 169 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 54/328 (16%), Positives = 129/328 (39%), Gaps = 14/328 (4%) Query: 257 LATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAER--------KHISESETHFRNAM 308 L L + W+ + I + + ER +E+E + Sbjct: 297 LDESTKSLNDLVFWIVLVSFSALFLIGIAFLIVLKKERDLQVLERYAEKTEAEKVLQKFY 356 Query: 309 EYSAIGMALVGTEG-QWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLI 367 E IGMA++ + +W++ N L + L YS ++L +F ++ P+DL + Q+ + Sbjct: 357 ELPFIGMAILDAQHDKWIRFNDRLPKILRYSSQDLAQKSFNEIIHPKDLAEVNAQLTDIE 416 Query: 368 SGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQL 427 SG+ ++ E + +V+ + V VR +G Y++ ++D+ ELK ++N + Sbjct: 417 SGKSEGFTTELHLLASDDSIVFGTINVKCVRGENGRVQYYLMTVQDVTELKHLAELNIEH 476 Query: 428 MERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHA 487 ++ +W + + + + + + + V Sbjct: 477 QNQLNALVHTIPDLVWLKDTEGLYLACNPSFERFFGAKEADIIGKTDY-DFVDKALADFF 535 Query: 488 EKVIRDSLQSRSPFKLEFRITVKDGIRH--IRALANRVLNKEGEVERLLGINMDMTEVKQ 545 + +++ + + E +T + + + N+EG+V ++G+ D+++ K+ Sbjct: 536 RENDCNAMAAEESIENEEWLTFSENGYRGLFSTIKTPMKNEEGQVIGVVGVARDISKRKE 595 Query: 546 LNEALFQEKERLHITLDSIGEAVV-CID 572 L + + ++ EA++ D Sbjct: 596 DEAQLERLTKLY-SAMNHTNEAIIRSTD 622 Score = 147 bits (372), Expect = 3e-33, Method: Composition-based stats. Identities = 56/300 (18%), Positives = 111/300 (37%), Gaps = 9/300 (3%) Query: 387 VVW-ALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEW 445 V W L++ S + L + + D+ L+R + + + + E IG+ Sbjct: 308 VFWIVLVSFSALFLIGIAFLIVLKKERDLQVLERYAEK-TEAEKVLQKFYELPFIGMAIL 366 Query: 446 ELKPN-IFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSR-SPFKL 503 + + + ++ R+ ++ + E + P+D + D + F Sbjct: 367 DAQHDKWIRFNDRLPKILRYSSQDLAQKS-FNEIIHPKDLAEVNAQLTDIESGKSEGFTT 425 Query: 504 EFRITVKDGIRHI-RALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLD 562 E + D V + G V+ L D+TE+K L E + + +L+ + Sbjct: 426 ELHLLASDDSIVFGTINVKCVRGENGRVQYYLMTVQDVTELKHLAELNIEHQNQLNALVH 485 Query: 563 SIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSAD 622 +I + V D NP E+ G + + +G + D EN +A Sbjct: 486 TIPDLVWLKDTEGLYLACNPSFERFFGAKEADIIGKTDYDFVDKALAD--FFRENDCNAM 543 Query: 623 TSRSAIEQDVVLH-CRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYS 681 + +IE + L +G TP+ +G IG V V +D+++ ++ QL Sbjct: 544 AAEESIENEEWLTFSENGYRGLFSTIKTPMKNEEGQVIGVVGVARDISKRKEDEAQLERL 603 Score = 139 bits (352), Expect = 5e-31, Method: Composition-based stats. Identities = 43/232 (18%), Positives = 77/232 (33%), Gaps = 11/232 (4%) Query: 286 VMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGL 345 + + I E S G+ + + + L N+A + GYS EE G Sbjct: 902 DISQHKKTEAQIE----LASKVFEQSREGIMITDSNQKILMVNEAFSEISGYSVEETLGK 957 Query: 346 TFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPL 405 T + L + Q V K I E + E +NG++ L++S T G Sbjct: 958 TPRMLASGRHSREFYQNVWKSIK-EKGHWQGEIWNRRKNGEIFPEWLSISRGLDTSGNVT 1016 Query: 406 YFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWE-WELKPNIFSWDKRMFELYEI 464 ++ DI+++K +E+ + L L + + + + L I Sbjct: 1017 EYVGIFNDISKVKESEEKIKHLAHYDPLTGLVNRELLMDRLNHSISTADRNNTPLALLFI 1076 Query: 465 PPHIKPNWQVWYECVLPEDR-----QHAEKVIRDSLQSRSPFKLEFRITVKD 511 N + + Q K++RD EF + + D Sbjct: 1077 DLDHFKNVNDTLGHQVGDQLLIEVGQRILKILRDEDTIARQGGDEFIVVLPD 1128 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 45/269 (16%), Positives = 94/269 (34%), Gaps = 14/269 (5%) Query: 289 AFRAERKHISESETHFRNAMEYSAIGMALV----GTEGQWLQTNKALCQFLGYSQEELRG 344 + E+ + + + + + AL + E++ Sbjct: 774 ERKIIEASRQEALDRLQKIADRLPGVIYQFRLMPDGTSSFPFASDALYEIYRVKPEDVTE 833 Query: 345 LT--FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDG 402 + ++ PED++ + +E+ Y E R +N DV W + DG Sbjct: 834 DSSKVFEVIHPEDVDDVQKSIEESAEHLTPWYQ-EYRVRFKNDDVRWLSGNAMPEKQPDG 892 Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELY 462 + L+ I DI++ K+TE + + E GI + I ++ E+ Sbjct: 893 SILWH-GFITDISQHKKTEAQIELASK----VFEQSREGIMITDSNQKILMVNEAFSEIS 947 Query: 463 EIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA-N 521 R+ + + S++ + ++ E K+G L+ + Sbjct: 948 GYSVEETLGKTPRMLASGRHSRE-FYQNVWKSIKEKGHWQGEIWNRRKNGEIFPEWLSIS 1006 Query: 522 RVLNKEGEVERLLGINMDMTEVKQLNEAL 550 R L+ G V +GI D+++VK+ E + Sbjct: 1007 RGLDTSGNVTEYVGIFNDISKVKESEEKI 1035 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 939 bits (2429), Expect = 0.0, Method: Composition-based stats. Identities = 189/885 (21%), Positives = 338/885 (38%), Gaps = 30/885 (3%) Query: 227 AVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMV 286 A+RL A L V+ + + S M ++ + +LL + + Sbjct: 7 ALRLSGTFALAGVLWIVLSDRFLASLPVSTQTLMMLQTYKGMGFVAGISLLLYYLVRRAL 66 Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGL- 345 + + ++ F+ A + +G + + + A Q LG E R Sbjct: 67 KSQAQLL-VQLRRNQALFQEAQLSAQLGSWEYDSARREFLWSGAARQLLGLPASETRTER 125 Query: 346 -TFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGD---VVWALLAVSLVRHTD 401 T Q D + ++ +++ + R G VW L V + Sbjct: 126 GTLLQRVAAGDRARVATVLDAMLAEGSGSVEF-----CRAGTGAAPVWLRLH-YQVHLDE 179 Query: 402 GTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFEL 461 P + ++DI+ K + ++ + E +GI L + ++R+ ++ Sbjct: 180 EAPGLVLGVLQDISVQKAQDDALREREQLFRGTFEQAAVGIAHLGLDGHWIRVNQRLCDI 239 Query: 462 YEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSP-FKLEFRIT-VKDGIRHIRAL 519 + + P D+ + R L P F +E R + + Sbjct: 240 LGYSREELLRLTL-QDITHPADQDSDLVMTRRLLSGEIPSFSIEKRYRQRRGQLVWANLT 298 Query: 520 ANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITF 579 A + ++ G E + + D++ KQ EA ++ DS+ E V+ D +I Sbjct: 299 AALMRDEGGRPEYFILVVEDISARKQSEEA----QQLALTVFDSMLEGVIITDHHRRILA 354 Query: 580 MNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSG 639 +N +++ + E LG + I+ + E ++ R G Sbjct: 355 VNAAFGEITRYPVEALLGRTPPLWRTAH--QDAAFYRRIWRQLLASGRWEGELWHRKRDG 412 Query: 640 GSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQ 699 + + SI+ + G V V D+++ + QL A +D LT L NR + Sbjct: 413 TPFPLWLSISCVRDEQGRPRQYVFVFNDISQLKDSQEQLERLAHYDPLTGLPNRHLALAR 472 Query: 700 LRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLAR 759 L L+ A++FIDLDRFK +NDS GH AGD LL +A + LR D LAR Sbjct: 473 LEHALERARRHAFPLAVMFIDLDRFKTINDSLGHQAGDELLVAIAQRLHQRLRQEDTLAR 532 Query: 760 LGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAA 819 LGGDEF +++ + V+ IA ++ V+ G VGAS GI+L + A+ Sbjct: 533 LGGDEFLVVIEEAPVQQVASIAHALLKVVDQPFGFSGGGEAYVGASIGISLYPGDGRSAS 592 Query: 820 EVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVA 879 E++ AD A Y +K G Y A +ER +M + R ++ + ++ + Sbjct: 593 ELIRNADAAMYLAKAQGSNAYRFYTESLTRAANERLSMETSLR-RALRCEEFVLHYQPLV 651 Query: 880 SPRIPEARNLWLISLKLWSCEGE-IIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV 938 + R L L W GE ++ F + L L V HE +Q + Sbjct: 652 --ELASGRVLGAEVLVRWQPPGEALVPPSRFIPLAEETGLIVPLGDWVLHEACRQGKAWL 709 Query: 939 ASK-GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SV 993 + + +++ LS LV + + L+ S LPP L L + A+++ AE ++ Sbjct: 710 DAGLPLLLAVNLSPRQFLRHDLVGQVRKALQGSGLPPAQLELELTEGALMEQAEQAVKTL 769 Query: 994 QKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHA 1053 L+ G + + G LK D L +D ++ + D ++T I Sbjct: 770 HALKRLGVSLAIDDFGTGYSSLAYLKRFPLDKLKIDRSFVRDLPRDSSDAEIVTTIIAMV 829 Query: 1054 QRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 + L ++ +A V P + L +G D G + + P + Sbjct: 830 RNLKLEALAEGVETPQQLAFLRQLGCDSGQGYLFSPPLPAEAFER 874 >UniRef50_C6ME82 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6ME82_9PROT Length = 1136 Score = 938 bits (2426), Expect = 0.0, Method: Composition-based stats. Identities = 189/907 (20%), Positives = 347/907 (38%), Gaps = 58/907 (6%) Query: 238 IFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHI 297 + + V +A +L YL H +L +L ER + Sbjct: 215 LPIVLVTDQGSEIAVARALHMGVDDYLTKHAGYLYETTAILEKV---QHQAELARERISL 271 Query: 298 SESETHFRNAMEYSAIGMA---LVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQL-TWP 353 ++ + + S + +VGT Q + ++ + + LGY+QEE+ + L P Sbjct: 272 KKTSLRLSDLLAASPTILYNLRVVGTTFQLVWVSENIERLLGYTQEEVMAEGWWNLHVHP 331 Query: 354 EDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIED 413 +D L +L++ + + + R +RNG VW + LVR +G PL + D Sbjct: 332 DDREAALTHQSELLA--VGQLTYDYRLLHRNGQSVWIHDELRLVRSINGKPLEVVGAWLD 389 Query: 414 INELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQ 473 ++E KRTE + Q + L + + ++ + S + M + + Sbjct: 390 VSEHKRTELIRQAHQSALNLIVANQPLPVILKDIAQRLESINPEMLVSILLLDQHTGRLK 449 Query: 474 VWYECVLPEDRQHAEKVIRDSLQSRS----PFKLEFRITVK-DGIRHIR----------- 517 LP+D A ++ S ++ E I D + + Sbjct: 450 HGEAPSLPDDYNAAIDQLKIGEGIGSCGTSAWRGEPVIVADIDHHPYWQSYLELTRKANL 509 Query: 518 --ALANRVLNKEGEVERLLGINMD------------------MTEVKQLNEALFQEKERL 557 N G+V I +T + + ++ Sbjct: 510 HACWTIPFKNDAGKVLGTFAIYHRTPREPSQADLGLINEFALLTALAVQKVYAAESLKQA 569 Query: 558 HITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMEN 617 +S E VV D+ +I +N +++G+++E+ LG + + + + Sbjct: 570 AAVFESTREGVVITDLQPRIVAINRAYAEITGYSEEQVLGKNPRIIK--SGRHDKLFYQA 627 Query: 618 IYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQ 677 ++++ T +V RSG Y +I+ + V V D+T+ ++ + Sbjct: 628 MWASLTKAGYWRGEVWNRRRSGDIYPQWLTISTVFNDRNEPCNYVGVFTDITQIKQSEAR 687 Query: 678 LSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGD 737 L++ A +DALT L NR + +L ++ + A +++DLDRFK VNDS GH GD Sbjct: 688 LAHLAHYDALTGLPNRLLVQSRLHHAIERTLRHGNQIAALYLDLDRFKNVNDSLGHPIGD 747 Query: 738 ALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWE 796 LL LA + LR D LARLGGDEF ++L D + +A +I + + Sbjct: 748 ELLVMLALRLKKRLREEDTLARLGGDEFLVVLEDIKDSNEPAMVAQTLIDLLATPFSLPS 807 Query: 797 GRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAA 856 G + S GI+L + + E++ AD+A Y +K GR + + A +ER Sbjct: 808 GHEIFINTSIGISLFPTDANSVTELIQHADMAMYLAKQEGRNTYRYHTDALSIAANERLV 867 Query: 857 MSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCE-GEIIDEQTFRRSFSD 915 + + + + + ++ + R + + + + +L W ++ F + Sbjct: 868 LETQLR-QALSAGEFVLHYQPLIDAR--KGQVMGVEALVRWQPPDKAMVSPGKFIPIAEE 924 Query: 916 PALSHALDRRVFHEFFQQAAKAVAS--KGISISLPLSVAGLSSATLVNDLLEQLENSPLP 973 L L V Q + + + +++ LSV S LV + + LE + LP Sbjct: 925 TGLIVPLGEWVLRTACAQGRAWMDADFPPLVMAVNLSVRQFQSENLVELIRQVLEETKLP 984 Query: 974 PRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLD 1029 L L + ++HAE ++ L+ G R+ + G LK D L +D Sbjct: 985 AACLELELTESMFMEHAEQSIEILKTLKSLGVRLSIDDFGTGYSSLTYLKRFPIDKLKID 1044 Query: 1030 GELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIAD 1089 + + D + I A+ L + +A V +D L+ G D G + Sbjct: 1045 QSFVHGLAYDPNDREIAATIIAMARNLKLDVLAEGVESEQQLDILNQHGCDYYQGYLFHR 1104 Query: 1090 AQPLDLL 1096 P L Sbjct: 1105 PVPAQEL 1111 >UniRef50_Q2SFI2 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFI2_HAHCH Length = 913 Score = 938 bits (2426), Expect = 0.0, Method: Composition-based stats. Identities = 184/883 (20%), Positives = 349/883 (39%), Gaps = 29/883 (3%) Query: 232 RMEAFLIFLTTVMMVSLMMAADPSLLAT------PRTYLMSHMPWLPFLLILLPANIMTM 285 R L ++ ++ + AD L+ T L S M ++ ++L ++ Sbjct: 15 RRLLVFSLLGAGLLSTVFLWADYQLMETLPAAQKAELSLQSAMLYILIACVVLIGGVVAW 74 Query: 286 VMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRG- 344 V+ A A K + ES + A + + +G + + + + + + LG S + + Sbjct: 75 VLTANEARNKALRESRNNLDKAQQIARLGNWVWDLKRNEVYWSDQVYRNLGLSLHDNKAS 134 Query: 345 -LTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGT 403 F + P+D + ++ V++ + + Y +E R +G+ A ++ G Sbjct: 135 YEKFLECVHPDDRARIVKLVDEALENK-QVYGIEHRVIWPDGEERIVCGAGEVIFDVQGN 193 Query: 404 PLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYE 463 P+ I+DI E KR E + I G + + I ++ Sbjct: 194 PVQMHGTIQDITERKRDENRKNEYAHLIYDLYNNAPCGYHSLDPRGVIVDINETALRWLG 253 Query: 464 IPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRH-IRALANR 522 ++ + + + Q + + + LE I KDG + + Sbjct: 254 YSRSELVGKVMFCDLLSEDCVQLCWDKLGQLKKGGALSNLELNIRCKDGRLFCVLLTSTA 313 Query: 523 VLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNP 582 + +++GE I +D TE ++ + L ++ + D+I EAV+ D A I +N Sbjct: 314 LQSEDGEFRGSRCILVDYTERRRHEKEL----QQAAVVFDAIREAVIITDDARNIVAVNN 369 Query: 583 VAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSY 642 ++G+T ++ G L + + +++ + T + ++ R+G Y Sbjct: 370 AFTDITGYTLDDVYGRNPR--LQQSGRHDKTFYRSLWRSITEHGHWQGEIENKRRNGEIY 427 Query: 643 DVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRI 702 +I + +G+ V V D++ ++ +QL + A+HD+LT L NR F L Sbjct: 428 PAWQNINVVYDKNGNVANYVSVFSDISVIKEKEKQLRHLANHDSLTGLPNRLLFFNSLEN 487 Query: 703 LLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGG 762 L+ AL+FIDLDRFK +ND+ GH AGD LL+ +A +L +R D++ARLGG Sbjct: 488 SLERARRRRMEVALMFIDLDRFKIINDTMGHEAGDILLKTVARRLLEAVRGEDMVARLGG 547 Query: 763 DEFGLLLPDCN-VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEV 821 DEF + L + + E A A ++I + G AS GI + + A + Sbjct: 548 DEFTISLEELSNTEDAAAKAGKLIETIRQ-PVHIGGHEIVCSASIGIAIFPHDADNAQNL 606 Query: 822 MSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASP 881 AD A Y +K R Y + E +S + + + ++ N+ + + Sbjct: 607 ARAADAAMYRAKELHRNTFEFYTSELTERAIEHLTLSSEMR-QALERNEFELYYQPQFN- 664 Query: 882 RIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV-- 938 + R + +L W +I F D AL + V ++ + A + Sbjct: 665 -LTSGRLVGAETLLRWRHPTRGLITPYCFINIAEDSALIDPIGGWVINQLCRDVAGWLKG 723 Query: 939 ASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPR--LLHLIIPAEAILDH---AESV 993 K I+ +S L + + L+ L P L L + A+ E + Sbjct: 724 GLKLPRIAFNVSSKQLEHYDVKGRIEHALQRWGLEPSDLDLELEVTEGALQHEERSVEVL 783 Query: 994 QKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHA 1053 +++RL G + + G + LK D L +D ++ + ++ L + I Sbjct: 784 RQVRLLGLSVAIDDFGTGYSSLSRLKHMPIDTLKIDRMFIRDLPDDPNNQALASGIILLG 843 Query: 1054 QRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 + LG+K +A V + L D G +++ P Sbjct: 844 RALGLKVVAEGVENVEQLRFLQERNCDEAQGFLLSKPLPKAAF 886 >UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WTL1_METML Length = 976 Score = 938 bits (2425), Expect = 0.0, Method: Composition-based stats. Identities = 148/708 (20%), Positives = 288/708 (40%), Gaps = 30/708 (4%) Query: 410 QIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIK 469 LK + + R A E G G+W+W + + + KR E+ + Sbjct: 267 VARRTQALKENIEELKNSEFRWKFAIEGAGDGVWDWNIATDEAQYSKRWKEMLGYDENEL 326 Query: 470 P-NWQVWYECVLPEDRQHAEKVIRDSLQSRSP-FKLEFRITVKDGIRHIRALANRV--LN 525 Q W + V +D + ++ ++D L+ ++ + +E+R+ KD + + Sbjct: 327 LPTNQEWADRVHHDDVAYVKQTMQDYLEGKTALYVVEYRLKCKDNRYKWILGRGMIVSRD 386 Query: 526 KEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAE 585 +G R++G + D+TE K++ + L + E +V + I +N Sbjct: 387 DQGNPLRMIGTHTDITERKKIEQQL----RIAATAFE-SQEGIVVTNENFNILRVNQAFI 441 Query: 586 KMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVH 645 ++G+ EEA G + + +G NIY++ + +++ ++G Y H Sbjct: 442 DITGYEAEEATGKKPNILK--SGRQSGEFYRNIYTSLRETGSWSGEIINRRKNGEIYPEH 499 Query: 646 YSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQ 705 +IT + DG V + D++ ++ ++ A D LT+L NR F +L L Sbjct: 500 LTITAVKDADGQTTNYVGMFTDISVAKAASERIENLAFFDPLTNLPNRRLFSDRLTQALV 559 Query: 706 TVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEF 765 + ALVF+DLD FK++ND+ GH GD LL+++A + + +R D +ARLGGDEF Sbjct: 560 NSTRSGNYGALVFLDLDHFKSLNDTLGHDYGDMLLKQVALRLSNCVREGDSVARLGGDEF 619 Query: 766 GLLLPDCNVESA------RFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAA 819 LL+ + + I +I+ ++N + + + S GI+L + + + Sbjct: 620 VLLVENLSANDVEAAHQIEAIGDKILMSLNQ-PYQLQSHEYLSTPSIGISLFNGHQESSE 678 Query: 820 EVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVA 879 +++ ADIA Y +K GR + ++P + R + + + I++ Q + Sbjct: 679 DLLKHADIAMYQAKKAGRNTLRFFDPLMQETINMRVDLEREL-KKAIEQKQFELYYQVQM 737 Query: 880 SPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA- 937 + + +L W E II F + L + V ++ Q Sbjct: 738 N---SAGQPSGAEALIRWRHPERGIISPIQFIPVAEETGLITQIGEWVLNQACLQLQAWQ 794 Query: 938 --VASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE---- 991 ASK S+++ +S N + + + + L L + ++D+ E Sbjct: 795 LDQASKDFSLAINVSAKQFLQPDFANQVKNSIRSFHIDNTKLKLELTESMLIDNIEYVIH 854 Query: 992 SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQG 1051 ++ L G + L G LK L +D ++ + ++ ++ I Sbjct: 855 TMNTLGEIGIQFSLDDFGTGYSSLQYLKMLPLSQLKIDQSFVRDLATDNSNKTIVLTIIT 914 Query: 1052 HAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNS 1099 A LG+ IA V + L+ G G ++ ++ + Sbjct: 915 MAHSLGLNVIAEGVETDEQLQLLNAHGCGNYQGYYFSEPLSINEFNHQ 962 Score = 153 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 95/272 (34%), Gaps = 10/272 (3%) Query: 283 MTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEEL 342 + A + + + SE ++ A+E + G+ Q +K + LGY + EL Sbjct: 267 VARRTQALKENIEELKNSEFRWKFAIEGAGDGVWDWNIATDEAQYSKRWKEMLGYDENEL 326 Query: 343 RGLT--FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLV-RH 399 + +D+ Q ++ + G+ Y +E R ++ W L +V R Sbjct: 327 LPTNQEWADRVHHDDVAYVKQTMQDYLEGKTALYVVEYRLKCKDNRYKWILGRGMIVSRD 386 Query: 400 TDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMF 459 G PL I DI E K+ EQ + GI NI ++ Sbjct: 387 DQGNPLRMIGTHTDITERKKIEQQLRIAATAFE-----SQEGIVVTNENFNILRVNQAFI 441 Query: 460 ELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRAL 519 ++ + + + + ++ S + E K+G + L Sbjct: 442 DITGYEAEEATGKKPNILKSGRQSGEFYRNIYTSLRETGS-WSGEIINRRKNGEIYPEHL 500 Query: 520 ANR-VLNKEGEVERLLGINMDMTEVKQLNEAL 550 V + +G+ +G+ D++ K +E + Sbjct: 501 TITAVKDADGQTTNYVGMFTDISVAKAASERI 532 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 35/257 (13%), Positives = 80/257 (31%), Gaps = 9/257 (3%) Query: 278 LPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGY 337 L + + + + + A E S G+ + L+ N+A GY Sbjct: 392 LRMIGTHTDITERKKIEQQLRIA----ATAFE-SQEGIVVTNENFNILRVNQAFIDITGY 446 Query: 338 SQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLV 397 EE G L + + + + E ++S E +NG++ L ++ V Sbjct: 447 EAEEATGKKPNILKSGRQSGEFYRNIYTSLR-ETGSWSGEIINRRKNGEIYPEHLTITAV 505 Query: 398 RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKR 457 + DG ++ DI+ K + + L L N + R Sbjct: 506 KDADGQTTNYVGMFTDISVAKAASERIENLAFFDPLTNLPNRRLF--SDRLTQALVNSTR 563 Query: 458 MFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSR-SPFKLEFRITVKDGIRHI 516 + +++ + + + K + L + R+ + + + Sbjct: 564 SGNYGALVFLDLDHFKSLNDTLGHDYGDMLLKQVALRLSNCVREGDSVARLGGDEFVLLV 623 Query: 517 RALANRVLNKEGEVERL 533 L+ + ++E + Sbjct: 624 ENLSANDVEAAHQIEAI 640 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 932 bits (2411), Expect = 0.0, Method: Composition-based stats. Identities = 189/910 (20%), Positives = 337/910 (37%), Gaps = 43/910 (4%) Query: 202 LTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPR 261 LT + +L L + + L +R R I + V A ++ Sbjct: 180 LTPTAFDLLLLDYRLPGLDALETVKVLRAER--GLDIPIVMVSGQGSEEVAARAMHLGVN 237 Query: 262 TYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMA--LVG 319 YL H +L L L + ER ++ + A+ S + + +G Sbjct: 238 DYLSKHPGYLHQLPATLEK---AWSLTQLERERANLRAASERLALALATSPVILYSRRLG 294 Query: 320 TEGQ-WLQTNKALCQFLGYSQEELRGLTFQ-QLTWPEDLNKDLQQVEKLISGEINTYSME 377 + + ++ + + LGYS + PED L + +L Sbjct: 295 PDERPLTWISENIARLLGYSPTLALQPGWWNSRLHPEDREAALDWLREL--DRGGAMVHA 352 Query: 378 KRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEA 437 R + G V W V+L+ GT DI K EQ+ + + + + Sbjct: 353 YRLIDAQGRVRWIQDEVTLLETDGGTTHEATGAWHDITATKTGEQMRETRLAVLDALIDK 412 Query: 438 GGIGIWEWELKPNIFSWDKRMFELYEIPPHIK-PNWQVWYECVLPEDRQHAEKVIRDSLQ 496 ++ I + +RM + I + E +PE +D Sbjct: 413 HS----LTDILGEIATRLERMEPDMRVSIQIGSDGPHLPAERTVPERPADWVAPFKDGAG 468 Query: 497 SRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKER 556 + + + ++ A +E E + +T V+ + Sbjct: 469 Q---------MLGRLFVHYVEPRAPTPTERELIDECACIAGLAVTRVRA-----DTRLRQ 514 Query: 557 LHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLME 616 +S E V+ D+ +I +N ++SG+++ E LG + + + + Sbjct: 515 AATVFESTREGVIITDLEGRILDVNRAFTEISGYSEPEVLGRNPSLLR--SNRQDHAFYQ 572 Query: 617 NIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLR 676 ++ + + + ++ +SG Y +I ++ G V V+ D+++ ++ Sbjct: 573 AMWHSLKTTGHWQGEIWNRRKSGELYPQILTINTVADSQGRPSHYVGVMTDISQLKQSEA 632 Query: 677 QLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAG 736 +L + +D LT+L NR + +L L+ + R A++F+DLDRFK VNDS GH +G Sbjct: 633 RLEHLVHYDPLTNLPNRRLVQSRLEHALERADRQGGRVAVLFVDLDRFKTVNDSLGHPSG 692 Query: 737 DALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN-VESARFIATRIISAVNDYHFIW 795 D LL LA + +R D LARLGGDEF +LL + E A +A ++S + + Sbjct: 693 DVLLELLARRLSERVREDDTLARLGGDEFLVLLENLQRPEDAAAVAESLLSLLQQPFHLP 752 Query: 796 EGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERA 855 G+ VGAS GI+L D+ H +++ AD+A Y +K GR Y P ER Sbjct: 753 NGQELYVGASIGISLYPDDGHTVTDLIQHADVAMYQAKEEGRNTYRFYTPSLTQTARERL 812 Query: 856 AMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSC-EGEIIDEQTFRRSFS 914 + R + + ++ R + R + +L W ++ F Sbjct: 813 GLEA-RLHRALASEEFVLHYQAQIDMR--DGRLIGCEALVRWHSATEGLVAPDRFIPLAE 869 Query: 915 DPALSHALDRRVFHEFFQQAAKAVASK--GISISLPLSVAGLSSATLVNDLLEQLENSPL 972 + L L V + A +++++ LS L S LV + L + L Sbjct: 870 ETGLIVPLGEWVLRQACADCQSWRARGLTDLTVAVNLSGRQLRSPDLVERVTRVLRETGL 929 Query: 973 PPRLLHLIIPAEAILDH----AESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLL 1028 P L L + I+D E ++ L+ G R+ + G LK D L + Sbjct: 930 PAERLKLELTESMIMDQREQALERLRALKALGVRLSIDDFGTGYSSLAYLKRLPIDELKI 989 Query: 1029 DGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIA 1088 D + ++ + D + I A+ L + IA V P D L G G + Sbjct: 990 DRDFVRDIPEDSSDMEIAATIIAMARNLRLNVIAEGVETPEQCDFLIRQGCTAGQGYLFG 1049 Query: 1089 DAQPLDLLVN 1098 P + Sbjct: 1050 RPLPAEAFAQ 1059 >UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4VY11_9CYAN Length = 1393 Score = 932 bits (2411), Expect = 0.0, Method: Composition-based stats. Identities = 202/1015 (19%), Positives = 386/1015 (38%), Gaps = 44/1015 (4%) Query: 106 VLLRKLLPWYNPLQNLADWLRLALGSAIVP-PLLGGVLV--VLLTPGDDPLRAFLIWVLS 162 +++R L P Q L R A + L G+ + ++ + + Sbjct: 394 LVIRDLTHREQPDQELRVRARQQATIAKLSQRALSGLDLNTLMDEAVSTIAQTLEVEYCK 453 Query: 163 ESIGALALVPLGLLFKPHYLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVL 222 L L+P G +F +P L+ +L+ + + P + + Sbjct: 454 ----VLELLPNGNVFLL-KAGVGWSPGLVGYALVGANRNSQAGYNLISQEPVVVEDLPID 508 Query: 223 LMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANI 282 +S L + ++ V+ T + + + A Sbjct: 509 TRFSGPPLLYNHRVVSGVSVVIPGQEQPFGVLGAHTTSQRRFSEDDIHFLQAVANVLALA 568 Query: 283 MTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGT---EGQWLQTNKALCQFLGYSQ 339 + + + + A+ S G+ + + + N A GY+ Sbjct: 569 IGH---------QQSEANLYLMQRAIAASNNGVIITDPNQPDNPVIYVNPAFESMTGYTA 619 Query: 340 EELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRH 399 +E+ G + P+ + ++ I + + + + Y ++G W L VS V Sbjct: 620 KEVIGHNCRFWQEPDYNQAGVTKLATAIQEQRECHVI-LQNYRKDGSTFWNELYVSPVFD 678 Query: 400 TDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELK-PNIFSWDKRM 458 DG +F+ DI + K+ E+ +Q E++ + +W L+ + Sbjct: 679 GDGYLTHFVGIQTDITKRKQAEEALRQSEEKLDSILRSLDDVVWSASLENQQFIYLNPAT 738 Query: 459 FELYEIP-PHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHI 516 +Y P +W + P+DRQ E+ + S LE+R+ DG +R + Sbjct: 739 ERVYGRPVSDFVDCPSLWQFVIHPDDRQRVERASNRMMHQGSK-DLEYRVVRPDGEVRWL 797 Query: 517 RALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMK 576 R A + + G R+ GI DMT+ KQ AL + +E+ +T + + + + Sbjct: 798 RDRARLIYDHRGIAIRMDGIATDMTKRKQAEAALLKSEEQFRLTFELAPIGMAMTSLEGQ 857 Query: 577 ITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHC 636 +N G+T +E L + + H T ++ S ++ + L Sbjct: 858 FLKVNQALCDALGYTAQELLALTFTEISHPTER-ALHFTQHQSLLQGELSHLQTERRLIS 916 Query: 637 RSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASF 696 +SG + + + G + + + D+++ ++M QL + A HD LT L NRA F Sbjct: 917 KSGRIVNAILKVVLVRDAQGQPLHYISQVVDISDRKRMEEQLLHDAFHDVLTGLPNRALF 976 Query: 697 EKQLRILLQTV-NSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSD 755 +L L+ A++ +DLDRFK +NDS GH GD LL +A + LR SD Sbjct: 977 MDRLEYALRRAGQRWDYLCAVIVLDLDRFKVINDSLGHLVGDRLLSAIAERLQGCLRPSD 1036 Query: 756 VLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDN 814 LARLGGDEF +LL D N +A IA I + + F +G AS GI L Sbjct: 1037 TLARLGGDEFTILLDDIPNTAAATDIAKSIHQTL-ESSFNLDGYEVFATASIGIALSGMG 1095 Query: 815 NHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMML 874 H+A +++ AD A + +K G +++ + + + + +W I+ +L + Sbjct: 1096 YHRAEDLLRDADTAMHRAKLQGTACYVMFDTAMSGRALAQLRLETELRW-AIERQELEVY 1154 Query: 875 AHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQ 933 + S + + +L W E +I F + L + + V Q Sbjct: 1155 YQPIIS--LGTGKITGFEALVRWQHPEQGMISPGAFIPLAEETGLIIPIGQWVLRTSCYQ 1212 Query: 934 AAKAVAS----KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH 989 + +++S+ LS S L+ + + ++ + + P L L I I++H Sbjct: 1213 LRQWQQQFPHYPPLTMSVNLSGKQFSQTNLIEQIAQIIQETEVNPSTLKLEITESGIMEH 1272 Query: 990 AES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEML 1045 ++S +++L+ ++ + G + L D L +D + + + + Sbjct: 1273 SDSASALLERLKALNIQLYIDDFGTGYSSLSRLHQFPIDALKIDRSFVSRMGDAGENGEI 1332 Query: 1046 ITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQ---PLDLLV 1097 + I A LGM +A + + + L G + G + + L+ Sbjct: 1333 VQAIVTLAHNLGMDVVAEGIETNMQLAQLRGRRCEYGQGYFFSKPLNRQAAEQLM 1387 Score = 98.2 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 54/441 (12%), Positives = 137/441 (31%), Gaps = 51/441 (11%) Query: 173 LGLLFKPHYLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPR 232 LG L+ + F L + ++ ++ + T + + L+ + + + Sbjct: 5 LGYLWWIGSKSQIERKPGWFYMLAGYGLICLDGFMDLVNRTFGLTTLNLNLIDTPIPMTL 64 Query: 233 MEAFLIFLTTVMMVSLMMAAD---------PSLLATPRTYLMSHMPWLPFLLILLPANIM 283 + L ++ + + PS + Y + ++ + Sbjct: 65 VYLLGFALLSIGLWQWLPFVAKVKKLDILSPSYSNSEEYYTCKLYDQGSAIA---QSDEL 121 Query: 284 TMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGT-EGQWLQTNKALCQFLGYSQEEL 342 + + + E FR + + +A+ +G + N G + EL Sbjct: 122 KQEIANCLHTNAELQQQEEQFRAITQAFPVPVAIARVSDGTIVYGNSHANVLFGVATSEL 181 Query: 343 RGLTFQQLT-WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTD 401 G + P D + L ++++ + + E + NG +W +++ ++ Sbjct: 182 VGNSMPDFYENPADWQRLLARLDQ----KGVVQNEELCVHTINGTPLWVTVSMQVLTLNQ 237 Query: 402 GTPLYFIAQIEDINE-------LKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSW 454 + ++ DI++ ++TE V + E I E + + Sbjct: 238 EKAI--LSVFHDISDTYQQLTQYQQTEAVLKDSEACYRTLVEQSPNAIA-LEHQGTLVYI 294 Query: 455 DKRMFELYEIPPHIKPNWQVWYECVLPE-----DR-----------QHAEKVIRD----- 493 + R +L H + + W + + DR + R Sbjct: 295 NPRGVKLLGTISHNQLIGKPWSDFNPKDQGNQRDREDHQVIGSEYTEKFSDHKRRSNPPH 354 Query: 494 SLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQE 553 +L + F E + + I + + + +L+ D+T +Q ++ L Sbjct: 355 ALTLPTKFVTEQIVQLDGQIIDVEIARLPAIYQGQRATQLV--IRDLTHREQPDQELRVR 412 Query: 554 KERLHITLDSIGEAVVCIDMA 574 + A+ +D+ Sbjct: 413 ARQQATIAKLSQRALSGLDLN 433 Score = 82.0 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 90/303 (29%), Gaps = 38/303 (12%) Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWEWEL-KPNIFSWDKRMFELYEIPPHIKP 470 ++I T QQ E+ +A + + + I + L+ + Sbjct: 123 QEIANCLHTNAELQQQEEQFRAITQAFPVPVAIARVSDGTIVYGNSHANVLFGVATSELV 182 Query: 471 NWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEV 530 + P D Q + E + +G ++ +VL E Sbjct: 183 GNSMPDFYENPADWQRLLARLDQ---KGVVQNEELCVHTINGTPLWVTVSMQVLTLNQE- 238 Query: 531 ERLLGINMDMTEVKQL-------NEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPV 583 + +L + D+++ Q L + ++ A+ ++ + ++NP Sbjct: 239 KAILSVFHDISDTYQQLTQYQQTEAVLKDSEACYRTLVEQSPNAIA-LEHQGTLVYINPR 297 Query: 584 AEKMSG-WTQEEALGVPLLTVLHIT-----FGDNGPL----MENIYSADTSRSAIEQDVV 633 K+ G + + +G P ++ + +S RS + Sbjct: 298 GVKLLGTISHNQLIGKPWSDFNPKDQGNQRDREDHQVIGSEYTEKFSDHKRRSNPPHALT 357 Query: 634 LHCR---------SGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQL----SY 680 L + G DV + P V I+D+T + ++L Sbjct: 358 LPTKFVTEQIVQLDGQIIDVEIARLPAIYQGQRATQLV--IRDLTHREQPDQELRVRARQ 415 Query: 681 SAS 683 A+ Sbjct: 416 QAT 418 Score = 56.6 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 20/156 (12%), Positives = 55/156 (35%), Gaps = 9/156 (5%) Query: 517 RALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCID-MAM 575 ++ ++ + + + ++ N L Q++E+ + V Sbjct: 102 EYYTCKLYDQGSAIAQSDELKQEIANCLHTNAELQQQEEQFRAITQAFPVPVAIARVSDG 161 Query: 576 KITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIE-QDVVL 634 I + N A + G E +G + +N + + + + ++ +++ + Sbjct: 162 TIVYGNSHANVLFGVATSELVGNSMPDFY-----ENPADWQRLLARLDQKGVVQNEELCV 216 Query: 635 HCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTE 670 H +G V S+ L+ I + V D+++ Sbjct: 217 HTINGTPLWVTVSMQVLTLNQEKAI--LSVFHDISD 250 >UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ79_9PROT Length = 923 Score = 931 bits (2408), Expect = 0.0, Method: Composition-based stats. Identities = 157/690 (22%), Positives = 286/690 (41%), Gaps = 18/690 (2%) Query: 416 ELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVW 475 + +R+E + + + A GIG W ++ N W + ++ + N++V+ Sbjct: 236 QHRRSEHALKLSEDNLNRAQSIVGIGSWHLDIVNNCLQWSDETYHIFGVAEGTPLNYEVF 295 Query: 476 YECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLG 535 E V +DR + + +L R P+ +E RI V IR +R AN + G +G Sbjct: 296 LEHVHADDRDLVNRTWQQALL-RQPYDIEHRILVNGEIRWVREKANLDFDAHGNAVYAIG 354 Query: 536 INMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEA 595 D+T KQ L DS GEA++ D +++ +N MSG+ EE Sbjct: 355 TVRDITRYKQEEATL----RLAARVFDSSGEAILITDENVRVVAVNHSFVAMSGYRSEEV 410 Query: 596 LGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLD 655 +G + + + ++ + ++ +SG Y SIT + Sbjct: 411 MGKNPRML--SSGRHDAEFYRAMWDDINQHGYWQGEIWDKHKSGRIYPKWMSITAVRDEH 468 Query: 656 GSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHA 715 G + + + +D TE + + + + A +D LT L NR +L ++ + + + Sbjct: 469 GKVVNYISIARDTTEQTEAEKNIHFLAYYDVLTGLPNRTLLRDRLGQMIAVAHRDKHQFS 528 Query: 716 LVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE 775 L+F+DLDRFK +NDS GH+ GD LL+ +A + +R D +ARLGGDEF +LL + Sbjct: 529 LIFLDLDRFKYINDSMGHSVGDRLLQSVALRIQDCVREGDTVARLGGDEFIVLLREAGES 588 Query: 776 SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNG 835 +A +A +++ A+ + +G+V AS GI++ D A ++ AD+A Y +K Sbjct: 589 AASVVAQKLLIALA-TPYDLDGQVISTQASIGISIYPDQAQDADTLIKNADMAMYRAKEE 647 Query: 836 GRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLK 895 GR + P+ +M D + ++ +L + A + + +L Sbjct: 648 GRNNFQFFVPEMNFRVDLLFSMEKDLRL-ALERGELFLQYQPQAD--LASGTLSGVEALI 704 Query: 896 LWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV--ASKGISISLPLSVA 952 W + F + A+ V Q A+ ++I++ LS+ Sbjct: 705 RWDHPVKGQVSPAEFIPVAEETGQIVAIGEWVLRTACSQMAEWRKTGMHDLTIAVNLSIR 764 Query: 953 GLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLSQV 1008 L L + L + L R L L I ++ + + +++ G ++ + Sbjct: 765 QLRQPDLAELIKSVLLETGLDARHLELEITEGIMMGDNQAAFRFLSEMQDLGVQLSIDDF 824 Query: 1009 GRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLP 1068 G N LK + L +D +++ + D +I I RL ++ IA V Sbjct: 825 GTGFSSLNYLKQMPVNKLKIDQSFIRDIETDEGDAAIIRSIISLGHRLNLRVIAEGVETQ 884 Query: 1069 LVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 +D L G D I G + + + Sbjct: 885 EQLDFLRIRGCDEIQGYFYSRPLLAEDFMR 914 Score = 242 bits (618), Expect = 7e-62, Method: Composition-based stats. Identities = 83/510 (16%), Positives = 166/510 (32%), Gaps = 33/510 (6%) Query: 57 FYRHAGRMWPGIALSCSLGNIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYN 116 R++P I + N+ + N +EA++G LLR + + Sbjct: 1 MLLFGWRLFPAIIIGEFFANLGTELTPLGA----FGLACGNALEALLGYYLLRHRVSFNE 56 Query: 117 PLQNLADWLRLALGSAIVPPLLGGVLVVLLT------PGDDPLRAFLIWVLSESIGALAL 170 L + D L + A+ PL+ + D + W + +++G Sbjct: 57 RLSTIRDVGLLFVFGALASPLVAALNGAWWIKLSTGESWQDYIHTVQYWWMGDALGIALF 116 Query: 171 VPLGLLFKPHYLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWP---FTFIIVLLMWSA 227 L + + R+ +L + L W+ L LP F LL+W A Sbjct: 117 TTTILAWTRGDSIVWSYERVR-RGVLAAVVLLLTCWILFLDLPGRLLEFGLFFPLLIWIA 175 Query: 228 VRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVM 287 + L + L + + L + L++ WL LL L A + ++ Sbjct: 176 LNFDLRCVSGALLLIFLSSILGLLSLGDLRGSSLDTLVNF-VWLYNLLFGLTALSVAVLN 234 Query: 288 YAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQE-----EL 342 R + SE + A IG + LQ + G ++ E+ Sbjct: 235 AQHRRSEHALKLSEDNLNRAQSIVGIGSWHLDIVNNCLQWSDETYHIFGVAEGTPLNYEV 294 Query: 343 RGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDG 402 F + +D + + ++ + Y +E R NG++ W +L G Sbjct: 295 ----FLEHVHADDRDLVNRTWQQALL--RQPYDIEHRIL-VNGEIRWVREKANLDFDAHG 347 Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELY 462 +Y I + DI K+ E + ++ G I + + + + + Sbjct: 348 NAVYAIGTVRDITRYKQEEATLRLAAR----VFDSSGEAILITDENVRVVAVNHSFVAMS 403 Query: 463 EIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANR 522 D + + + D + ++ E K G + + ++ Sbjct: 404 GYRSEEVMGKNPRMLSSGRHDAE-FYRAMWDDINQHGYWQGEIWDKHKSGRIYPKWMSIT 462 Query: 523 -VLNKEGEVERLLGINMDMTEVKQLNEALF 551 V ++ G+V + I D TE + + + Sbjct: 463 AVRDEHGKVVNYISIARDTTEQTEAEKNIH 492 Score = 130 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 26/241 (10%), Positives = 71/241 (29%), Gaps = 7/241 (2%) Query: 280 ANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQ 339 A + ++ E + + + S + + + + N + GY Sbjct: 352 AIGTVRDITRYKQEEATLRLAAR----VFDSSGEAILITDENVRVVAVNHSFVAMSGYRS 407 Query: 340 EELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRH 399 EE+ G + L+ + + + I + + E +++G + ++++ VR Sbjct: 408 EEVMGKNPRMLSSGRHDAEFYRAMWDDI-NQHGYWQGEIWDKHKSGRIYPKWMSITAVRD 466 Query: 400 TDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMF 459 G + +I+ D E E+ L L + + + + R Sbjct: 467 EHGKVVNYISIARDTTEQTEAEKNIHFLAYYDVLTGLPNRTLL--RDRLGQMIAVAHRDK 524 Query: 460 ELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRAL 519 + + ++ + + + + +Q D + Sbjct: 525 HQFSLIFLDLDRFKYINDSMGHSVGDRLLQSVALRIQDCVREGDTVARLGGDEFIVLLRE 584 Query: 520 A 520 A Sbjct: 585 A 585 >UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Bacteria RepID=B2JCW5_BURP8 Length = 1040 Score = 931 bits (2407), Expect = 0.0, Method: Composition-based stats. Identities = 179/864 (20%), Positives = 342/864 (39%), Gaps = 36/864 (4%) Query: 253 DPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMY---AFRAERKHIS------ESETH 303 D +L A + + FL++ + A ++ R+ + S+ Sbjct: 167 DRALKAALDASMRDSRYAMLFLVVTMLAGSGLLIYTFGARENVAREKLRVARTLHRSDER 226 Query: 304 FRNAMEYSAIGMALVGTEG-QWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQ 362 FR E + M + + ++L N A Q GYS+ E +T + + ++ + Sbjct: 227 FRGLFEQHPVPMYIFDRDTLRFLAVNAAAVQQYGYSESEFLAMTVRAIRPHSEVARLETH 286 Query: 363 VEK--LISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRT 420 +++ + G T + + ++G + A ++ + G P F+ +D+ E Sbjct: 287 LQRSDVTPGGPRTMAGVWHHRRKDGSQISADISYHAMTFM-GRPALFV-LADDVTEQINA 344 Query: 421 EQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVL 480 E Q+ + + + I+ + + + + + + + Sbjct: 345 EAEAQRSNQMLETVIDNIPQRIFWKDKELRYLGCNMAFARDAGLAYPEQVIGKRDEDMPW 404 Query: 481 PEDRQHAEKVIRDSLQSRSP-FKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMD 539 + + D + S P E + + R + +G V +LG D Sbjct: 405 RAFAEALGRQDTDVMLSGVPKMNYETDLVIDGVHRTTVTSKLPFTDSDGRVIGVLGSYTD 464 Query: 540 MTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMA---MKITFMNPVAEKMSGWTQEEAL 596 +TE K+ + AL LD+ A++ + + I ++NP ++++G+ +E + Sbjct: 465 ITERKRADLAL----RLQSRALDASVNAILITEPSKEGNLIEYVNPAFKRITGYDPQEVI 520 Query: 597 GVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDG 656 G + + + I A + + + + + G + I P+ DG Sbjct: 521 GQDCRLLQR--DDRDQEGIAAIRQALAANREVSAVLRNYRKDGALFWNQLYIAPVPDADG 578 Query: 657 SNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHAL 716 + VI DVT + QL Y A++D+LT L NR +L+ L H+ A+ Sbjct: 579 QTTHHIAVINDVTALIRYQEQLEYQANYDSLTRLPNRNLLRDRLQHALIVAQRHHKGVAV 638 Query: 717 VFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD-CNVE 775 VFIDLD FK VNDS GH+ GD LL +A + R+SD +AR GGDEF +++ D + + Sbjct: 639 VFIDLDGFKNVNDSLGHSVGDRLLSVVADRLARCARASDTVARHGGDEFVIVMTDTVDEQ 698 Query: 776 SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNG 835 S R+ +++++ +G VG S G +L + A +M +AD+A Y +K+ Sbjct: 699 SLIAWMERVRASISE-PVWLDGTELYVGCSMGASLFPQDGDDAETLMKKADLAMYRAKDM 757 Query: 836 GRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLK 895 GR Y+P+ + R + + +++N+ ++ I + + + +L Sbjct: 758 GRNTFQFYQPEMNVSAGARLNLERRLRRA-LRDNEFLLHYQPQVD--IETGQVVGMEALV 814 Query: 896 LWS-CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV--ASKGISISLPLSVA 952 W E +I F + L L V E +Q +S+ LS Sbjct: 815 RWHDPEVGLIPPSQFIPVAEESGLIGPLSEWVLREACRQNKAWQDEGLPPARVSVNLSAR 874 Query: 953 GLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQV 1008 + +++ LE + L P+ L L + I+ +AE + +L G + + Sbjct: 875 QFQQRDIAKLVMQVLEETGLDPQYLELELTESTIMRNAEEAVSMLNELHALGIGLAIDDF 934 Query: 1009 GRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLP 1068 G + LK D L +D +++ + DE + + I A L ++ IA V Sbjct: 935 GTGYSSLSYLKRFPVDRLKIDRSFVSDIGESSDDETITSAIIALAHSLNLQVIAEGVETS 994 Query: 1069 LVMDTLSGIGVDLIYGEVIADAQP 1092 +D L D + G A P Sbjct: 995 TQLDFLKERACDEMQGYFFAKPLP 1018 >UniRef50_Q12L20 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Shewanella RepID=Q12L20_SHEDO Length = 1047 Score = 927 bits (2397), Expect = 0.0, Method: Composition-based stats. Identities = 233/1059 (22%), Positives = 443/1059 (41%), Gaps = 55/1059 (5%) Query: 69 ALSCSLGNIAASILLFSTSS-----LNMTWTTINIVEAVVGAVLLRKLLPWY-NPLQNLA 122 L + + L ++ + V A G +LL + Y L + Sbjct: 13 FLGQVAIVMMLAYFLCLIPRNDQQKHAPSYQIVIGVLAAFGVMLLIEHGIMYGLGLPSNE 72 Query: 123 DWLRLALGSAIVPPLLGGVLVVLLTPGDDPLRAFLIWVLSESIGALALVPLGLLFKPHYL 182 + + L G+ A + ++ G L+ L+ P+ + Sbjct: 73 SVFQDLNQTYSSDSELTGLFFA--------SSALIASLVGLYFGRYVLLVAALVLSPYVI 124 Query: 183 LRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFLTT 242 P + L L+ L + ++L ++ F + + Sbjct: 125 YLTDFPIISLILALGLSGVLGALFRRYTVEH-----------LGTIKLAKLYLFGLVVQI 173 Query: 243 VMMVSLMMAADP--SLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISES 300 V + + M+ AD ++ YL+ P L++L AN+M+ ++ R + + E Sbjct: 174 VFLSTSMLTADNWRHVIHLNSLYLLVFFP----LIMLAAANLMSKYIFFERNMQIRLQE- 228 Query: 301 ETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDL 360 + F+N + IG+A+ WL+ N +C+ L YS++EL +T+++LT PEDL KDL Sbjct: 229 DFLFKNQFDIGNIGIAITSKAKYWLKVNPCICKMLKYSEKELTRMTWKELTHPEDLEKDL 288 Query: 361 QQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRT 420 +++ GEI+ Y ++KR+ ++G +V+ L V+ + +G+ L IA DI +LK+ Sbjct: 289 SYFNRMLKGEISEYEIDKRFIAKDGAIVYTHLTVACRFYDNGSML-VIAGFLDITKLKQA 347 Query: 421 EQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIK-PNWQVWYECV 479 E Q E++ L ++ +GIW+W + N + + R ++ + +W++ + Sbjct: 348 EAALQNSKEQLALVLDSSDLGIWDWHINTNEVASNLRSAQIIGCELALLNQKPSLWFKAI 407 Query: 480 LPEDRQHAEKVIRDSLQSRSPFK-LEFRIT-VKDGIRHIRALANRVLNKE-GEVERLLGI 536 + EDR+ K + + +S +E+RI + IR I V + G+ R+ G Sbjct: 408 IAEDRKRLIKSLLAIRKGQSIHHKIEYRIRSLNGDIRWILDTGKVVEVADTGQPLRMCGT 467 Query: 537 NMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEAL 596 + D+T++K+ E+L + EA+ D KI NP +++G+ +E + Sbjct: 468 HTDITDLKRAEESLS----IAASVYRNSSEAMCVFDYQGKIVNTNPAFSEITGFDADEVI 523 Query: 597 GVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDG 656 G L + + + + ++ ++G +Y +I + LD Sbjct: 524 GQHLAVLQKE--EQAEHFNLQLEQYLFEKRYWQGELSFQRKNGQTYTAWVTINAIGELDT 581 Query: 657 SNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHAL 716 + +V++ DV+E ++ + A++D LT L NR + +++ + +Q AL Sbjct: 582 CDTLNVMLFADVSEKKQAEELIWLQANYDTLTGLPNRRMLLEYIKLQIANCTRDNQGFAL 641 Query: 717 VFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD-CNVE 775 +F+DLD FK VNDS GH GD+LL E + + + +R +D++AR+GGDEF ++L D + Sbjct: 642 LFLDLDFFKEVNDSLGHDMGDSLLVEASQRIKACIRDADLVARIGGDEFTIVLTDFTGPK 701 Query: 776 SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNG 835 + +I+ +++ F+ + + S GITL D+ ++ AD A Y++K Sbjct: 702 GVERVTNKILKQLSE-PFMLGSEMAYISGSIGITLYPDDALTIDGLLKNADQAMYSAKAH 760 Query: 836 GRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRI-PEARNLWLISL 894 GR + + P+ R + D + IK + + + +L Sbjct: 761 GRNKFNYFTPKMQETALRRMKLIQDLKT-AIKMEEFELYYQPIIDFSANASDNITKAEAL 819 Query: 895 KLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGI--SISLPLSV 951 W I F D + + VF + +QAA+ + G+ IS+ S Sbjct: 820 IRWHHPKLGFISPVDFIPIAEDTGMIVEIGNWVFRQACRQAAQWKQTYGLDIQISINKSP 879 Query: 952 AGLSSA-TLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRLAGCRIVLS 1006 + V + + L P + + I +L+ + R AG +I L Sbjct: 880 VQFRDERSSVTSWTQYMSELNLSPASICVEITEGLLLETESGVGAKLAAFRDAGMQISLD 939 Query: 1007 QVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVV 1066 G + LK DYL +D +N++ N D L I + +LG+K IA + Sbjct: 940 DFGTGYSSLSYLKKFDIDYLKIDKSFVSNLEDNTNDLSLCEAIIVMSHKLGIKVIAEGIE 999 Query: 1067 LPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNSSYFAIN 1105 L L G D G + + + + + + + Sbjct: 1000 TELQRAMLECAGCDYGQGYLFSKPVKAEDFESRYFISSD 1038 >UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1A0_9PROT Length = 1011 Score = 927 bits (2397), Expect = 0.0, Method: Composition-based stats. Identities = 150/702 (21%), Positives = 284/702 (40%), Gaps = 28/702 (3%) Query: 410 QIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIK 469 + L+ T Q+ +R+ E I + + ++ + E + Sbjct: 316 IVRHAQRLQATSNDLQESEKRLRTIFETEPECIKVVDRNGELVEMNQAGLAMLEAATLEE 375 Query: 470 PNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITV-KDGIRHIRALANRVLNKEG 528 + + V PED+ + R + S LEF+IT K + H+ A + + G Sbjct: 376 ARQKKLIDYVAPEDQAAFLALHRRVMNGESAV-LEFKITGLKGTLHHLETHATPMPDANG 434 Query: 529 EVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMS 588 + LLGI D+T + L + E ++ D I +N +++ Sbjct: 435 NISLLLGITRDVTASMHAKQQL----RIAATAFE-SQEGMLVTDAVGAILRVNQAFTRIT 489 Query: 589 GWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSI 648 G+T +E +G + + + + ++ E ++ ++G Y H +I Sbjct: 490 GYTADEVIGKNPRIL--NSGRHDAYFYKEMWERIKRTGEWEGEIWNRRKNGDVYPEHLTI 547 Query: 649 TPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVN 708 T + G+ + V + D+T S+ ++ A D LT L NR + +L+ L + Sbjct: 548 TAVKDAGGNVVNYVATLMDITASKASEEEIRNLAFFDPLTRLPNRRLLQDRLQQALASCG 607 Query: 709 STHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLL 768 + + A++FIDLD FK +ND+ GH GD LL ++A + S +R D +AR+GGDEF ++ Sbjct: 608 RSGKSGAILFIDLDNFKNLNDTLGHDIGDLLLEKVAIRLSSCVREGDTVARIGGDEFVVM 667 Query: 769 LPDCN------VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVM 822 L D + E + ++I++++N + + S G TL +DN++ E++ Sbjct: 668 LEDLSDNILDAAEQTESVGSKILASLN-VPYQLGIHTYDNSPSIGATLFNDNHNSIDELL 726 Query: 823 SQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPR 882 QADIA Y +K GR + ++P+ + S R A+ L+ + + I+++Q + Sbjct: 727 KQADIAMYQAKKAGRNTMRFFDPRMQQSLSARLALELELR-KAIEKDQFQLYYQIQVD-- 783 Query: 883 IPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK 941 R L +L W E ++ F + L + V Q Sbjct: 784 -ETHRPLGAEALLRWMHPEHGLMAPAEFIPMAEETGLIVPIGWWVLETACTQLKAWEKDP 842 Query: 942 ---GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQ 994 + +S+ +S V+ + +++ + P LL L + +L++ + + Sbjct: 843 LTRNLVLSINVSAKQFHQPDFVDQVQAAVDHYGIDPALLKLELTESILLENVDTTIKRMS 902 Query: 995 KLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQ 1054 L+ G L G LK D L +D + + D +++ I AQ Sbjct: 903 ALKKTGVGFSLDDFGTGYSSLQYLKRLPLDQLKIDQSFMQEITSDSSDMAIVSTIIAMAQ 962 Query: 1055 RLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 + M IA V L G + G + + P++ Sbjct: 963 SMQMGVIAEGVETEEQRQLLLRKGCNHFQGYLFSKPVPVEQF 1004 Score = 139 bits (351), Expect = 7e-31, Method: Composition-based stats. Identities = 41/271 (15%), Positives = 84/271 (30%), Gaps = 10/271 (3%) Query: 282 IMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFL-GYSQE 340 ++ +A + ESE R E + +V G+ ++ N+A L + E Sbjct: 315 LIVRHAQRLQATSNDLQESEKRLRTIFETEPECIKVVDRNGELVEMNQAGLAMLEAATLE 374 Query: 341 ELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHT 400 E R PED L ++++GE +E + G + + + Sbjct: 375 EARQKKLIDYVAPEDQAAFLALHRRVMNGESAV--LEFKITGLKGTLHHLETHATPMPDA 432 Query: 401 DGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFE 460 +G + D+ +Q + G+ + I ++ Sbjct: 433 NGNISLLLGITRDVTASMHAKQQLRIAATAFE-----SQEGMLVTDAVGAILRVNQAFTR 487 Query: 461 LYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA 520 + D + K + + ++ ++ E K+G + L Sbjct: 488 ITGYTADEVIGKNPRILNSGRHD-AYFYKEMWERIKRTGEWEGEIWNRRKNGDVYPEHLT 546 Query: 521 NR-VLNKEGEVERLLGINMDMTEVKQLNEAL 550 V + G V + MD+T K E + Sbjct: 547 ITAVKDAGGNVVNYVATLMDITASKASEEEI 577 Score = 138 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 60/160 (37%), Gaps = 2/160 (1%) Query: 283 MTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEEL 342 + + + H + A E S GM + G L+ N+A + GY+ +E+ Sbjct: 438 LLLGITRDVTASMHAKQQLRIAATAFE-SQEGMLVTDAVGAILRVNQAFTRITGYTADEV 496 Query: 343 RGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDG 402 G + L +++ + I + E +NGDV L ++ V+ G Sbjct: 497 IGKNPRILNSGRHDAYFYKEMWERIK-RTGEWEGEIWNRRKNGDVYPEHLTITAVKDAGG 555 Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGI 442 + ++A + DI K +E+ + L L + Sbjct: 556 NVVNYVATLMDITASKASEEEIRNLAFFDPLTRLPNRRLL 595 >UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5Q6_AZOSB Length = 828 Score = 926 bits (2395), Expect = 0.0, Method: Composition-based stats. Identities = 161/810 (19%), Positives = 297/810 (36%), Gaps = 28/810 (3%) Query: 304 FRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQV 363 +N ++ + G++L N A FLGY+ + + G + +L+ P+ + Q Sbjct: 6 LQNVLDAIPAPVFFKDAAGRYLGCNTAFLDFLGYTADRILGKSVFELSPPDLAARYHAQD 65 Query: 364 EKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQV 423 + L E + N G+ + + T+G + I DI + K+ E+ Sbjct: 66 QALFDNPGEQV-YEAQVQNARGERREVVFYKATFHDTEGKVAGLVGTILDITDRKQAERR 124 Query: 424 NQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPED 483 ++ ER+ +A ++ + + + L+ + + ED Sbjct: 125 VRESEERLGALIQALPDAVFLKDGEGRWLVTNGAAQALFGLAERDWFGRTDLE--LGSED 182 Query: 484 RQHAEKVIRDSLQSRSPFK-------LEFRITVKDGIRHIRALANRVLNKEGEVERLLGI 536 AE + ++ LE + A + + G+ + ++ + Sbjct: 183 PARAEVHAVCARNDELVWQQGGMRQMLEIVEDGQGRRLVFEATRIPLFDSVGQRKGIVVV 242 Query: 537 NMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEAL 596 D+TE + E L + D+ E + D I +NP +++G+ + E + Sbjct: 243 GRDITERRAAEERL----RQAATVFDNTVEGISITDRDGIIQSVNPAFSRITGYAEAEVI 298 Query: 597 GVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDG 656 G + + ++ + ++ ++G Y +I + +G Sbjct: 299 GCHTRILQ--SGRHGADYYRAMWRTLARTGQWQGEIWNRRKTGEVYPQWLTIGTVRDDEG 356 Query: 657 SNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHAL 716 V V D+++ + QL A +D LT L NRA +L + A+ Sbjct: 357 EVSNYVAVFSDISQIKDAQSQLERLAHYDPLTGLPNRALLGDRLAHAISRARRAGTSVAV 416 Query: 717 VFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD-CNVE 775 +F+DLD FK VNDS GH AGD LL+ +A + LRS ++R GGDEF ++L D E Sbjct: 417 LFLDLDGFKNVNDSLGHPAGDRLLQIIAERLCGALRSEGSVSRFGGDEFAVVLEDVVRGE 476 Query: 776 SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNG 835 + +A +I+ + +G V AS GI L + A ++ AD A Y SK Sbjct: 477 AVSEVAEHLIAEIAR-PLDLDGHGAHVSASIGIALFPRDGDDATTLIKAADTAMYRSKAL 535 Query: 836 GRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLK 895 GR + + A A R ++ + + +++ + + R +L Sbjct: 536 GRNTFSFHHEDMAQAAHRRLSLEHGLR-QALEQGRFELWYQPQIDLR--TGVLAGAEALL 592 Query: 896 LW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV--ASKGISISLPLSVA 952 W E ++ F + L + V E + + I++ ++ Sbjct: 593 RWRDPERGLVSPAEFVPLAEETGLILPIGLWVLEEACRAGRAWLDVGLAPGRIAVNVAAP 652 Query: 953 GLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLSQV 1008 + + L S LPP L + I ++L AE +V LR G + + Sbjct: 653 QIERGGFDQAVARVLSASGLPPAALEVEITEGSLLRSAENARLAVAALRALGVGVAIDDF 712 Query: 1009 GRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLP 1068 G LK L +D E ++ + + + I + LG +A V P Sbjct: 713 GTGYSSLAYLKNLAVQTLKIDREFVRDLPHDAGNLAITRAIIAMCRSLGFGVVAEGVEEP 772 Query: 1069 LVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 L G L G + A P Sbjct: 773 AQAAFLVSEGCTLAQGYLFAKPMPGAEFAE 802 Score = 150 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 45/358 (12%), Positives = 111/358 (31%), Gaps = 23/358 (6%) Query: 280 ANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQ 339 ++ + RA + + ++ + + G+++ +G N A + GY++ Sbjct: 239 IVVVGRDITERRAAEERLRQA----ATVFDNTVEGISITDRDGIIQSVNPAFSRITGYAE 294 Query: 340 EELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRH 399 E+ G + L + + + ++ + E + G+V L + VR Sbjct: 295 AEVIGCHTRILQSGRHGADYYRAMWRTLA-RTGQWQGEIWNRRKTGEVYPQWLTIGTVRD 353 Query: 400 TDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMF 459 +G ++A DI+++K + ++L L + + + S +R Sbjct: 354 DEGEVSNYVAVFSDISQIKDAQSQLERLAHYDPLTGLPNRALL--GDRLAHAISRARRAG 411 Query: 460 ELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRAL 519 + ++ + + ++I + L + E ++ G L Sbjct: 412 TSVAVLFLDLDGFKNVNDSLGHPAGDRLLQIIAERLC--GALRSEGSVSRFGGDEFAVVL 469 Query: 520 ANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKE-RLHITLDSIGEAVVCIDMAMKIT 578 + V + ++ E A + + SIG A+ D T Sbjct: 470 EDVVRGEA---------VSEVAEHLIAEIARPLDLDGHGAHVSASIGIALFPRDGDDATT 520 Query: 579 FMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSR-SAIEQDVVLH 635 + M + +ALG + H ++ ++ Sbjct: 521 LIKAADTAMY---RSKALGRNTFSFHHEDMAQAAHRRLSLEHGLRQALEQGRFELWYQ 575 Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats. Identities = 40/281 (14%), Positives = 92/281 (32%), Gaps = 10/281 (3%) Query: 277 LLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLG 336 + + + + + + ESE ++ + L EG+WL TN A G Sbjct: 105 VAGLVGTILDITDRKQAERRVRESEERLGALIQALPDAVFLKDGEGRWLVTNGAAQALFG 164 Query: 337 YSQEELRGLTFQQLTWPE----DLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALL 392 ++ + G T +L + +++ + ++L+ + M + + G + Sbjct: 165 LAERDWFGRTDLELGSEDPARAEVHAVCARNDELVWQQGGMRQMLEIVEDGQGRRLVFEA 224 Query: 393 AVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIF 452 + + G + DI E + E+ +Q + GI + I Sbjct: 225 TRIPLFDSVGQRKGIVVVGRDITERRAAEERLRQAA----TVFDNTVEGISITDRDGIIQ 280 Query: 453 SWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG 512 S + + + + R ++ ++ E K G Sbjct: 281 SVNPAFSRITGYAEAEVIGCHTRILQSGRHGADYYRAMWRTLARTGQ-WQGEIWNRRKTG 339 Query: 513 IRHIRA-LANRVLNKEGEVERLLGINMDMTEVKQLNEALFQ 552 + + V + EGEV + + D++++K L + Sbjct: 340 EVYPQWLTIGTVRDDEGEVSNYVAVFSDISQIKDAQSQLER 380 >UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7V0E6_PSEA8 Length = 1415 Score = 925 bits (2392), Expect = 0.0, Method: Composition-based stats. Identities = 172/851 (20%), Positives = 321/851 (37%), Gaps = 44/851 (5%) Query: 279 PANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTE-GQWLQTNKALCQFLGY 337 + + + + + E E + +A++ + + + + +N L Q LGY Sbjct: 561 AVTLSLSDVTSRKEVELSLIEREKFWSDAVQAVPDTLYIHDLHARRVIFSNHHLGQQLGY 620 Query: 338 SQEEL--RGLTFQQ-LTWPEDLNKDLQQVE-KLISGEINTYSMEKRYYNRNGDVVWALLA 393 +QEEL G F + L P+D + + + G+ + R+ +R+G W + Sbjct: 621 NQEELARMGENFWETLLHPDDQEYYWRIRNLQHVVGDGLLLDSQLRWRHRDGRWHWFDIR 680 Query: 394 VSLV-RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIF 452 R G I +DI ++ R + E I+ + + N Sbjct: 681 EQAFSRDRSGRVARLIGVAKDITFTVEANNALRENGRRYRMLAENISDVIFSTDAELNAS 740 Query: 453 SWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFK--LEFR---- 506 + ++ P + P ++R + + E R Sbjct: 741 YVSPSVQHVFGYSPEWALLNGLHQTATNPRQLGRLNGLLRRVRHAIGDRQKLAELRENPG 800 Query: 507 --------ITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLH 558 + I + ++ E LLGI D+++ ++ L Sbjct: 801 QHLFALDCLRADGRKIPIELRIVLMWDEHDRFEGLLGIARDISQQRRAEREL----RMAA 856 Query: 559 ITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENI 618 + A++ D A I +N +++G++ + L + ++++ Sbjct: 857 TVFEHSTAAIMVTDPAGYIVQVNDSFSRLTGYSPADVLDQQPRLL--TADRQEANQLKHV 914 Query: 619 YSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQL 678 ++ + E +++ ++G Y IT + +G + V D++E + R++ Sbjct: 915 LASLQHSGSWEGEILQKRKTGELYPSWVGITAVRDEEGDLVSFVCFFSDISERKASERRI 974 Query: 679 SYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDA 738 A +DALTHL NR F+ +L LQ Q L+F+DLDRFK +NDS GHAAGD Sbjct: 975 HRLAYYDALTHLPNRTLFQDRLHTALQQAERNGQWVVLMFLDLDRFKPINDSLGHAAGDR 1034 Query: 739 LLRELASLMLSMLRSSDVLARLGGDEFGLLLP-----DCNVESARFIATRIISAVNDYHF 793 +L+E+A+ + + + D +AR+GGDEF LLLP + ++ A +A I+ + F Sbjct: 1035 MLQEVATRLSACVSQDDTVARMGGDEFTLLLPSQGDREIALKRAIQVAELILGRLAR-PF 1093 Query: 794 IWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSE 853 EGR V AS G+ L + + + +M AD A Y +K G+ Y+ + A E Sbjct: 1094 TLEGREFFVTASIGVALSPQDGAELSLLMKNADTAMYHAKEMGKNNFQFYQAEMNARALE 1153 Query: 854 RAAMSLDEQWRMIKENQLMMLAHGVASPRIPEA-RNLWLISLKLW-SCEGEIIDEQTFRR 911 R + D + R ++ + ++ + R +L W ++ F Sbjct: 1154 RLELESDLR-RALELGEFVLHYQPQF---TGDGRRLTGAEALLRWQHPRRGLVPPSEFIP 1209 Query: 912 SFSDPALSHALDRRVFHEFFQQAAKAVAS--KGISISLPLSVAGLSSATLVNDLLEQLEN 969 + L + + E +Q + + +S+ LS + L + L Sbjct: 1210 VLEEIGLVAQVGDWLLAEACKQLRSWHKAKVRVPKVSVNLSARQFADGQLGERIAAILYE 1269 Query: 970 SPLPPRLLHLIIPAEAILDHA----ESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADY 1025 + +PP L L + ++ + + L+ G I + G N LK D Sbjct: 1270 TGIPPACLELELTESILMSDVAEAMQILSGLKRLGLAIAVDDFGTGYSSLNYLKQFPIDV 1329 Query: 1026 LLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGE 1085 L +D + D + I A L + IA V +D L G D + G Sbjct: 1330 LKIDRSFVDGLPHGEQDAQIARAIIAMAHSLNLMVIAEGVESQAQLDFLREHGCDEVQGY 1389 Query: 1086 VIADAQPLDLL 1096 + P + Sbjct: 1390 LFGRPMPAEQF 1400 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 71/554 (12%), Positives = 149/554 (26%), Gaps = 66/554 (11%) Query: 175 LLFKPHYLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMW-----SAVR 229 L R+ L + ++ L L W + S Sbjct: 157 LYLTLREPGSRRDSGFWLLHLASDSLAQWSPDLPTGNLLWRLEDQYAGRVLWHTPGSTAL 216 Query: 230 LPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYA 289 L M+ + L D + + + + LL+ + ++ + Sbjct: 217 LDDMQTLGVEPLRNSDWQLRGLYDSTRVRLGLLPGIGGELAIFLLLVGVTVYMLLRLHRE 276 Query: 290 ---FRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 RA S A+ + + +G+ N + G S + R Sbjct: 277 QQGLRAMTLASQRSLRQAATALAAIDERVLVTRADGRLSYLNPQAERLFGISSAQARQHH 336 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVR-------- 398 L DL+ +G E G+ L+ + Sbjct: 337 LLGLLP------DLEPGWLTDAGGDGETRSELLPLRVRGEPRTFTLSRHPLASYPALADQ 390 Query: 399 ----HTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKP----- 449 + + D+ E + V ++ R E G+ + +L Sbjct: 391 AWTLREQILQGGQVWVLRDVTEEQHALGVLEETRRRYQDIFEGVGVALCVLDLSALRQAL 450 Query: 450 -----------------------------NIFSWDKRMFELYEIPPHIKPNWQVWYECVL 480 I + L +I + ++ L Sbjct: 451 VEQGLDSCAALRAWLAGEPGRQQALLERIRITEINDVSRRLLQIDSTEQAWQRLLDHGPL 510 Query: 481 PEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDM 540 D +VI ++ R +LE + L R+ GE + D+ Sbjct: 511 QPDSLRL-QVIEALIERRPVLELEATLRCGKSTPRHLWLQLRLPENPGEWHAVTLSLSDV 569 Query: 541 TEVKQLNEALFQEKERLHITLDSIGEAVVCIDMA-MKITFMNPVAEKMSGWTQEEA--LG 597 T K++ +L + ++ + ++ + + D+ ++ F N + G+ QEE +G Sbjct: 570 TSRKEVELSLIEREKFWSDAVQAVPDTLYIHDLHARRVIFSNHHLGQQLGYNQEELARMG 629 Query: 598 VPLLT-VLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPL-STLD 655 +LH + + N+ ++ + R G + Sbjct: 630 ENFWETLLHPDDQEYYWRIRNLQHVVGDGLLLDSQLRWRHRDGRWHWFDIREQAFSRDRS 689 Query: 656 GSNIGSVLVIQDVT 669 G + V +D+T Sbjct: 690 GRVARLIGVAKDIT 703 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 60/162 (37%), Gaps = 29/162 (17%) Query: 530 VERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSG 589 V LL ++ + ++ + A + + L +I E V+ +++++NP AE++ G Sbjct: 267 VYMLLRLHREQQGLRAMTLASQRSLRQAATALAAIDERVLVTRADGRLSYLNPQAERLFG 326 Query: 590 WTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSR-SAIEQDVVLHCRSGGSYDVHYSI 648 + +A LL +L +E + D +++ G S Sbjct: 327 ISSAQARQHHLLGLLPD--------LEPGWLTDAGGDGETRSELLPLRVRGEPRTFTLSR 378 Query: 649 TPLST----------------LDGSNIGSVLVIQDVTESRKM 674 PL++ G V V++DVTE + Sbjct: 379 HPLASYPALADQAWTLREQILQGGQ----VWVLRDVTEEQHA 416 >UniRef50_A0LKD9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKD9_SYNFM Length = 844 Score = 924 bits (2389), Expect = 0.0, Method: Composition-based stats. Identities = 148/706 (20%), Positives = 276/706 (39%), Gaps = 21/706 (2%) Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELY 462 +A + + ++ E+ + + +GI + ++R+ E+ Sbjct: 134 RIHSALALYRERVIRHHKTRELRESEEKFRVTFDQAPVGIAHVNADGRLLLINRRLCEML 193 Query: 463 EIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFK-LEFRITVKDG-IRHIRALA 520 + + +PE+R E+ ++ S++ + E + KDG I + Sbjct: 194 GFQERELIE-SSFPDLCVPENRDVHERELKKSVEQGLEYHGFEIPLVHKDGRIIWTKLTL 252 Query: 521 NRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFM 580 + + + G + + I D+TE K + L + EA++ D I + Sbjct: 253 SPMKDAAGVPKYFIHIVEDITERKNFEDNL----RLSATVFEGSTEAIIITDARANILRV 308 Query: 581 NPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGG 640 N M+G+ E +G + + + +++ +S + ++ ++G Sbjct: 309 NSAFTAMTGYADHEVVGKNPRLLK--SGNHHEEFYRAMWATLSSTGQWQGEIWNRRKNGD 366 Query: 641 SYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQL 700 + ++ + + V + +D+T ++ +LSY ASHDALT L NRA F +L Sbjct: 367 IFPAWLTLCAVRNSEDKITNYVGISRDITLRKEAEERLSYQASHDALTGLPNRARFHDRL 426 Query: 701 RILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARL 760 L A++F+DLDRFK +ND+ GH GD LL+ + +L R SD LAR Sbjct: 427 THALARAGRDRHEFAILFLDLDRFKVINDTLGHTVGDFLLQGVTKRLLGGTRESDTLARW 486 Query: 761 GGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAA 819 GGDEF +LL E A A RI+ + + F +G V S GI++ + Sbjct: 487 GGDEFIILLESIRGAEDAAVAARRILDVLAE-PFSVQGHEVFVSGSIGISVYPRDGEDVQ 545 Query: 820 EVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVA 879 ++ ADIA Y +K+ G+ YE + ER + D ++ +K N+ ++ Sbjct: 546 ALLRCADIAMYRAKDSGKNDYQFYESTMSTGGLERLKLEGDLRY-ALKRNEFVLHYQPRV 604 Query: 880 SPRIPEARNLWLISLKLWS-CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV 938 + I + +L W + ++ F + + V Q K Sbjct: 605 N--INTGLIVGAEALIRWDLPDRGLLWPLDFIPLAEESGFIIPIGEWVLRTACLQCRKWQ 662 Query: 939 AS--KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----S 992 + +S+ LS L + + L+ + L P LL L I A++++ E + Sbjct: 663 DAGVPHPRVSVNLSTHQFKKDNLTSTVDRILKETGLSPGLLELEITESAMMENLEKAVAT 722 Query: 993 VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGH 1052 +Q L G + + G LK L +D ++ N+ D + I Sbjct: 723 LQGLAELGVNVAIDDFGTGYSSLGYLKRFPIGALKIDQSFVRHIPSNIDDTAIAMSIISL 782 Query: 1053 AQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 + L +K +A V + L D G + + D + Sbjct: 783 GKTLNLKVVAEGVETQEQLTVLRNYQCDEAQGYLFSQPVDADRMTE 828 Score = 182 bits (463), Expect = 7e-44, Method: Composition-based stats. Identities = 61/275 (22%), Positives = 114/275 (41%), Gaps = 10/275 (3%) Query: 279 PANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYS 338 A + + + + ESE FR + + +G+A V +G+ L N+ LC+ LG+ Sbjct: 137 SALALYRERVIRHHKTRELRESEEKFRVTFDQAPVGIAHVNADGRLLLINRRLCEMLGFQ 196 Query: 339 QEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVR 398 + EL +F L PE+ + ++++K + + + E +++G ++W L +S ++ Sbjct: 197 ERELIESSFPDLCVPENRDVHERELKKSVEQGLEYHGFEIPLVHKDGRIIWTKLTLSPMK 256 Query: 399 HTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRM 458 G P YFI +EDI E K E + E I + + NI + Sbjct: 257 DAAGVPKYFIHIVEDITERKNFEDNLRLSA----TVFEGSTEAIIITDARANILRVNSAF 312 Query: 459 FELYEIPPHIKPNW--QVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHI 516 + H ++ E+ + + +L S ++ E K+G Sbjct: 313 TAMTGYADHEVVGKNPRLLKSGNHHEE---FYRAMWATLSSTGQWQGEIWNRRKNGDIFP 369 Query: 517 RALA-NRVLNKEGEVERLLGINMDMTEVKQLNEAL 550 L V N E ++ +GI+ D+T K+ E L Sbjct: 370 AWLTLCAVRNSEDKITNYVGISRDITLRKEAEERL 404 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 34/248 (13%), Positives = 72/248 (29%), Gaps = 3/248 (1%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + ERK+ ++ E S + + L+ N A GY+ E+ G Sbjct: 268 IVEDITERKNFEDNLRLSATVFEGSTEAIIITDARANILRVNSAFTAMTGYADHEVVGKN 327 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 + L + + + +S + E +NGD+ A L + VR+++ Sbjct: 328 PRLLKSGNHHEEFYRAMWATLSS-TGQWQGEIWNRRKNGDIFPAWLTLCAVRNSEDKITN 386 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP 466 ++ DI K E+ L + + + R + I Sbjct: 387 YVGISRDITLRKEAEERLSYQASHDALTGLPNRARFH--DRLTHALARAGRDRHEFAILF 444 Query: 467 HIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNK 526 ++V + + + + L + D + + Sbjct: 445 LDLDRFKVINDTLGHTVGDFLLQGVTKRLLGGTRESDTLARWGGDEFIILLESIRGAEDA 504 Query: 527 EGEVERLL 534 R+L Sbjct: 505 AVAARRIL 512 >UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q5P4W8_AZOSE Length = 1039 Score = 922 bits (2385), Expect = 0.0, Method: Composition-based stats. Identities = 161/824 (19%), Positives = 297/824 (36%), Gaps = 27/824 (3%) Query: 282 IMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEE 341 + + + + + + E + M +V + + L E Sbjct: 214 AVKEDITLQKRAERELRDREMKLAALIASLPDLMFVVDQNRCIAEFHAPDPGLLLTPPEC 273 Query: 342 LRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTD 401 G + + P + K + +E+ IS +E G +VS + + Sbjct: 274 FLGRPYARTLPPAVVVKLDEALEE-ISATGGAKQVEYTLDLPRGR-HHFSASVSRLAGSG 331 Query: 402 GTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWEL-KPNIFSWDKRMFE 460 P FI + D+ E R EQ + R + + + I + + E Sbjct: 332 LVPEGFIVLVRDLTERVRMEQALIESELRYRELFANSRVVMLVIDPVDGRIVEANAKACE 391 Query: 461 LYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA 520 Y P ++ V R+ + + + + F+ R+ G +A Sbjct: 392 YYGYDPVSLTRMKIEDINVP--GREPLRFEMVQARKPDT-FRCCHRL--AGGQLRDVEVA 446 Query: 521 NRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFM 580 + + G + L I D+TE K+ E + + + + + ++ D IT + Sbjct: 447 SSPIEIAGR-KLLYSIVRDVTERKRFEERM----RQAMVVFKASSQGIMTTDAQGVITSV 501 Query: 581 NPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGG 640 NP ++G+ E +G + ++++ + +V G Sbjct: 502 NPAFCTITGYLAAEVIGRKSSMFKPE--RHEATFFDAMWTSIVESGSWAGEVWSRRSDGD 559 Query: 641 SYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQL 700 Y +IT + DG V + D+TE ++ + A+ D LT LANR+ + +L Sbjct: 560 RYPQWVTITAVRDTDGRIAEYVTLFSDITERKQQEVAMWRQANFDPLTGLANRSLLQDRL 619 Query: 701 RILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARL 760 L + L+F+DLD FK +NDS GH GD LL ++A + S +R D +ARL Sbjct: 620 DRALAHARRHGCKVGLLFLDLDGFKWINDSLGHDVGDELLVDVARRLNSCVRDEDTVARL 679 Query: 761 GGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAA 819 GGDEF +++ D + IA ++++ + + F G H + S GIT+ D+ Sbjct: 680 GGDEFTVVVHDLADRADLGAIADKLVAVLRE-PFALRGARHHISGSVGITVFPDDGDDVQ 738 Query: 820 EVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVA 879 ++ ADIA Y +K G+ R Y P A R + D + +++ + + Sbjct: 739 TLLRNADIAMYKAKQAGKNRAQPYAPHMQADALARVHLEADLRM-AVEQRAFELHYQPIV 797 Query: 880 SPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA- 937 + +L W E +I F + L + V E +Q Sbjct: 798 DC--ASGALVGAEALIRWKHPERGMISPLEFIPVAEECGLIVPIGEWVLREVVRQRRDWL 855 Query: 938 -VASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAIL---DHAE-S 992 + ++L +S A L + L L I ++ ++ E Sbjct: 856 ARGHPPLRLTLNVSGVQFREAGLPELVRTLLAEFGTARSSLVFEITESVLMGGSENVEAR 915 Query: 993 VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGH 1052 + ++ G L G + LK D + +D + + D L+ I Sbjct: 916 MCDIKEQGICFALDDFGTGFSSLSYLKRFPVDIVKIDRSFVRDCPDDRNDATLVEAIINM 975 Query: 1053 AQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 A LG++ A V + L +G D + G +I D Sbjct: 976 AHSLGLRVTAEGVESAEQREFLRALGCDYLQGYLIGKPLAADAF 1019 Score = 239 bits (611), Expect = 5e-61, Method: Composition-based stats. Identities = 77/484 (15%), Positives = 167/484 (34%), Gaps = 19/484 (3%) Query: 206 WLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFL------IFLTTVMMVSLMMAADPSLLAT 259 W + P IV+ + +A+ + L + L+ V L+ + LA Sbjct: 4 WPEYVRQRRPLVVGIVVFLVAAMVSGVLVLGLGHPGDNLGLSLNAAVVLLFSLLLGGLAN 63 Query: 260 PRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHI--SESETHFRNAMEYSAIGMAL 317 L +H L L+ A + RA+ + A+E S + + Sbjct: 64 QMAQLRAHRADLQRLVAARSAEVRAREAELDRAQSVAHVGEQQLRKLSTAIECSPASIVI 123 Query: 318 VGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSME 377 G N + GY+ +E+ G + L + + I+ + + E Sbjct: 124 TDRSGTIEYVNPQFERSTGYTAQEVVGKNPRILKSGNRSADEYAAMWATIT-HGHVWRGE 182 Query: 378 KRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEA 437 ++G W +++ +R DG F+A EDI KR E+ + ++ + Sbjct: 183 FENVRKDGAHYWERASIAPIRADDGMISGFVAVKEDITLQKRAERELRDREMKLAALIAS 242 Query: 438 GGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQS 497 ++ + I + L PP + + + P ++ + + + Sbjct: 243 LPDLMFVVDQNRCIAEFHAPDPGLLLTPPECFLG-RPYARTLPPAVVVKLDEALEEISAT 301 Query: 498 RSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERL 557 ++E+ + + G H A +R+ E + + D+TE ++ +AL + + R Sbjct: 302 GGAKQVEYTLDLPRGRHHFSASVSRLAGSGLVPEGFIVLVRDLTERVRMEQALIESELRY 361 Query: 558 HITLDSIGEAVVCIDM-AMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLME 616 + ++ ID +I N A + G+ + + + + Sbjct: 362 RELFANSRVVMLVIDPVDGRIVEANAKACEYYGYDPVSLTRMKIEDINVP-GREPLRF-- 418 Query: 617 NIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLR 676 + A R G DV + +P+ + G + +++DVTE ++ Sbjct: 419 EMVQA---RKPDTFRCCHRLAGGQLRDVEVASSPI-EIAGRKLLY-SIVRDVTERKRFEE 473 Query: 677 QLSY 680 ++ Sbjct: 474 RMRQ 477 Score = 138 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 37/278 (13%), Positives = 79/278 (28%), Gaps = 3/278 (1%) Query: 276 ILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFL 335 I + + + ERK E + S+ G+ +G N A C Sbjct: 450 IEIAGRKLLYSIVRDVTERKRFEERMRQAMVVFKASSQGIMTTDAQGVITSVNPAFCTIT 509 Query: 336 GYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVS 395 GY E+ G + I E +++ E +GD + ++ Sbjct: 510 GYLAAEVIGRKSSMFKPERHEATFFDAMWTSIV-ESGSWAGEVWSRRSDGDRYPQWVTIT 568 Query: 396 LVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWD 455 VR TDG ++ DI E K+ E + L A + + + Sbjct: 569 AVRDTDGRIAEYVTLFSDITERKQQEVAMWRQANFDPLTGLANRSLL--QDRLDRALAHA 626 Query: 456 KRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRH 515 +R + ++ + + + + L S + D Sbjct: 627 RRHGCKVGLLFLDLDGFKWINDSLGHDVGDELLVDVARRLNSCVRDEDTVARLGGDEFTV 686 Query: 516 IRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQE 553 + + ++L+ + + ++ + Sbjct: 687 VVHDLADRADLGAIADKLVAVLREPFALRGARHHISGS 724 >UniRef50_A6V917 Membrane protein, putative n=6 Tax=Pseudomonas aeruginosa RepID=A6V917_PSEA7 Length = 1105 Score = 922 bits (2384), Expect = 0.0, Method: Composition-based stats. Identities = 382/1092 (34%), Positives = 590/1092 (54%), Gaps = 15/1092 (1%) Query: 23 GLVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRHAGRMWPGIALSCSLGNIAASIL 82 G + F+ L + LS+ +A +W P +I+ A R R WP I +L N+AA+ L Sbjct: 4 GALFFLAALACIYLSRQPATIAAIWLPNAILAAALLRAPLRQWPMILFCTALANLAANRL 63 Query: 83 LFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQNLADWLRLALGSAIVPPLLGGVL 142 + ++ + N+ EA A+LLR + NL +R+ A+VPPLLG + Sbjct: 64 YGDSLWMSAAFLPANLSEATFAAMLLRMNRVREDFDFNLLSAVRVLWAGALVPPLLGASV 123 Query: 143 VVLLTPG---DDPLRAFLIWVLSESIGALALVPLGLLFKPHYLLRHRNPRLLFESLLTLA 199 L + + W + +++G LAL+PL L + R ++ + L Sbjct: 124 GAALVSLFGLGSFPQMWARWYVGDAMGMLALLPLCLASSLATWRHGLSGRAGVDNAMLLL 183 Query: 200 ITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLAT 259 TL +S++++ LP+ F ++++ L+ +A LI +++++A + Sbjct: 184 ATLFISFVALTRLPYSFIYVLLPLLVAAASTSVFGTALIGCLNTCFIAVLIAMGVFAPES 243 Query: 260 PRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVG 319 + + +LP L L+PA +++++M R E+ ++ E FR AME+SAIG ALV Sbjct: 244 SQQRFGEPLLYLPMALTLIPAFLVSVIMERSRREQHQVAIGEAQFRGAMEFSAIGTALVA 303 Query: 320 TEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKR 379 +G+ + N+ALC+ LGY E + LTFQ +T+ DL DL V L++G IN+Y MEKR Sbjct: 304 LDGRLFKVNEALCRMLGYPAERVGELTFQAITYAADLELDLDLVRDLLAGRINSYQMEKR 363 Query: 380 YYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGG 439 Y ++G+ WA ++VSLVR +G YF+ Q+EDI+ KR E ++L ER+ LA +AG Sbjct: 364 YLRQDGETFWARISVSLVRDEEGIAQYFVTQVEDIDSRKRAELERERLAERVKLATDAGQ 423 Query: 440 IGIWEWELKPNIFSWDKRMFELYEI-PPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSR 498 IGIWEW+L+ N WD RMF+LY I + + W + P+D + + +L Sbjct: 424 IGIWEWDLRHNRLHWDFRMFDLYGIRSGPGETTVEQWQAALHPDDHERVLHELDRALSGL 483 Query: 499 SPFKLEFRITVKD-GIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERL 557 F EFRI D +RH+RA+A +++ R++GIN D+TE++ L E L++EKERL Sbjct: 484 QKFDCEFRIVRPDRQVRHLRAIATLTRDEDSRPVRMIGINSDITEIRTLAETLYEEKERL 543 Query: 558 HITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMEN 617 +TL SIG+AV+ D ++TFMNPVAE M+GWT ++ALG P V ++ D G +++ Sbjct: 544 QVTLYSIGDAVLTTDAGGRVTFMNPVAEAMTGWTLQDALGAPHELVFNVLDSDTGDTLDS 603 Query: 618 -IYSADTSRSAIEQD--VVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKM 674 + + + L R G +D+ P+ T DG IG+VLV Q+VT++R M Sbjct: 604 PVRRCLQNTRVFYLEDGATLISRKGEQHDIQNCAAPVRTRDGEIIGTVLVFQNVTKARAM 663 Query: 675 LRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHA 734 R+LSY ASHDALT L NR FE++LR L +HAL FIDLDRFK VNDSAGHA Sbjct: 664 QRELSYHASHDALTGLFNRTKFEEELRRALANAQERASQHALCFIDLDRFKVVNDSAGHA 723 Query: 735 AGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFI 794 AGD LLREL+ ++ R+SD LARLGGDEFGLLL DC++ A +A+++I + F Sbjct: 724 AGDMLLRELSRILADRTRASDTLARLGGDEFGLLLFDCDLAVAEEVASKLIEQICSVRFP 783 Query: 795 WEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSER 854 WEGRV+ VGAS GIT + + +E+MSQAD+ACYA+K+ GR RV+VY+ + Sbjct: 784 WEGRVYDVGASIGITALTATSRSTSELMSQADVACYAAKHAGRNRVSVYQFGHEEVERQH 843 Query: 855 AA-MSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKL-WSCEGEIIDEQTFRRS 912 + ++ ++ + A + L + +G++ F + Sbjct: 844 RDILLASGLREALENDRFQLQAQEIVPVVARRDGGRHYELLLRLYDPDGQMTPPGAFIPA 903 Query: 913 FSDPALSHALDRRVFHEFF-QQAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSP 971 L ++DR V +E + A G++I + LS L+ + LL+++E+SP Sbjct: 904 AERFNLMASIDRWVINEALINFGPRIAAIDGLTIGINLSGNSLNDPLFLPYLLDRIEHSP 963 Query: 972 LPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLL 1027 L P L+ + A+++ V KLR GC++ L G L FN LK D + Sbjct: 964 LGPERLYFELTETALMNQLSVASRIVDKLRDLGCKVALDDFGSGLSSFNYLKNFAVDAIK 1023 Query: 1028 LDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVI 1087 +DG N+ + +D+ ++ I AQRLG T+A V ++D L+ +GVD G + Sbjct: 1024 IDGSFVRNLDKSPVDQAIVDSINQIAQRLGAVTVAEFVESREILDHLARLGVDYAQGYAV 1083 Query: 1088 ADAQPLDLLVNS 1099 QP ++ Sbjct: 1084 GRPQPFATVLEQ 1095 >UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B8HP13_CYAP4 Length = 1094 Score = 922 bits (2383), Expect = 0.0, Method: Composition-based stats. Identities = 172/837 (20%), Positives = 327/837 (39%), Gaps = 29/837 (3%) Query: 276 ILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFL 335 + + T + + + ++E +R+ E + G+ EG++++ N AL + Sbjct: 250 AVAGIVVNTRDITDHKRTESALRQAEEKYRSIFENAVEGIFQSSPEGRYIRVNPALARMY 309 Query: 336 GY-SQEELRGLTFQQL-----TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVW 389 GY S EEL + PE + ++LI + E + Y R+G ++W Sbjct: 310 GYDSPEELLA-HLTDIGRQLYVDPERRAEF----QRLIDQQTIVTHFEAQVYRRDGSIIW 364 Query: 390 ALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKP 449 VR G LY+ +E+I + KRTE Q + +A + + Sbjct: 365 ITEHARAVRDGTGKLLYYEGTVENITDRKRTELQLLQTTSELKAIFQALPDLYFRVDHDS 424 Query: 450 NIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITV 509 I + + P ++ + + P I L + LE+ + + Sbjct: 425 TILDFKAGRRTDLYLEPEEFLGRRM-TDVLPPPVATQFSGAIDRILSGEARVDLEYVLPM 483 Query: 510 KDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVV 569 DG + A +L +++ + ++T+ K+ L Q +E+ ++ E + Sbjct: 484 PDGEQTFEARLLPLLQ-----TQIIAVIRNITKRKRAENELRQAEEKYRSIFENATEGIF 538 Query: 570 CIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIE 629 + NP ++ G+ + L L + + + + ++S + Sbjct: 539 QSSPSGSYISANPALARIYGYDSPQELQHHLTDIGRQLYVNPDRRQQFVHSILEQGQVTD 598 Query: 630 QDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTH 689 + ++ + G + + + G+ + ++D++ ++ + Y A HD LT Sbjct: 599 FESQVYRKDGSVIWISENARAVRDRQGNILYFEGTVEDISARKQAELTIHYQAFHDLLTG 658 Query: 690 LANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLS 749 L NRA F+ +L L A+ F+DLDRFK +ND+ GHA GD LL+++A +L Sbjct: 659 LPNRALFDDRLNQALADARRYQHLLAVFFLDLDRFKVINDTLGHAIGDQLLQQVAQRLLP 718 Query: 750 MLRSSDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGI 808 LR D +AR GGDEF LLLP + IA R+++++ F +G + AS GI Sbjct: 719 CLREIDTIARWGGDEFTLLLPHVQTPADSVKIAERLLASL-KPPFSLKGHNLHITASLGI 777 Query: 809 TLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKE 868 L + ++ AD A Y +K GR + Y P + E A+ + + +++ Sbjct: 778 ALYPHDGEDGTTLLRNADAALYRAKEEGRNGLYCYTPMLNSRGHELLALESEL-HKALEQ 836 Query: 869 NQLMMLAHGVASPRIPEARNLWLISLKLWSC-EGEIIDEQTFRRSFSDPALSHALDRRVF 927 +L + + L L +L W + ++ QTF + L + + V Sbjct: 837 QELDVYYQPQIN--AATGEILRLEALVRWQHSQLGLVSPQTFIGLAEENGLIMPIGQWVL 894 Query: 928 HEFFQQAAKAVAS--KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEA 985 Q + A G+ ++ LSV LV + E L+ + L L L I Sbjct: 895 ETACHQCRQWQARGFPGLGTAVNLSVRQFQQPHLVQQVAETLQYTGLAADRLELEITETT 954 Query: 986 ILDHA----ESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLM 1041 + + + +L G I L G N L+ + +D + ++ Sbjct: 955 AMQNVNLTRTLLHELDQMGVGIALDDFGSGYSSLNYLRQFPLHSIKIDRTFIQELPYSVQ 1014 Query: 1042 DEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 D+ ++ + + L + +A V + L +G D+I G + Sbjct: 1015 DQAIVKAVIALGRGLNLSVVAEGVESQSQLKVLRSLGCDIIQGYFFGPPIAAAAMTQ 1071 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 71/386 (18%), Positives = 132/386 (34%), Gaps = 10/386 (2%) Query: 302 THFRNAMEYSAIGMALV---GTEGQWLQTNKALCQFLGYSQEELR---GLTFQQLTWPED 355 + F ++ G+ + ++ GYS +EL G F +T PED Sbjct: 19 SRFLRLIDSLP-GIVFSGSNDAQWSMQYLSRGCLALTGYSSDELAQKGGEAFNAITHPED 77 Query: 356 LNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDIN 415 L + L + I+ Y +E R ++G+ W L V D I DI Sbjct: 78 LPRVLATLSAAIAS-SEPYEVEYRIRTKSGEEKWVLEKGHRVLDEDQCTCGIEGFITDIT 136 Query: 416 ELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVW 475 LKR E Q R I + + + + L P + Sbjct: 137 PLKRAEAALIQAEARWRSLIHNSSDLITILDAQGTVLYHSPVLKRLLGYHPQNCEGKSAF 196 Query: 476 YECVLPEDRQHAEKVIRDSLQSRS-PFKLEFRITVKDGIRHIRALANRVLNKEGEVERLL 534 V P+DR+ ++ + ++ +E+R +DG R L + V ++ Sbjct: 197 G-LVHPQDRKQVQQTFQQAITHTEFTLTVEYRFRHQDGSWRFLESTGRNLLADPAVAGIV 255 Query: 535 GINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEE 594 D+T+ K+ AL Q +E+ ++ E + + +NP +M G+ E Sbjct: 256 VNTRDITDHKRTESALRQAEEKYRSIFENAVEGIFQSSPEGRYIRVNPALARMYGYDSPE 315 Query: 595 ALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTL 654 L L + + D E D + ++ R G + + Sbjct: 316 ELLAHLTDIGRQLYVDPERRAEFQRLIDQQTIVTHFEAQVYRRDGSIIWITEHARAVRDG 375 Query: 655 DGSNIGSVLVIQDVTESRKMLRQLSY 680 G + ++++T+ ++ QL Sbjct: 376 TGKLLYYEGTVENITDRKRTELQLLQ 401 Score = 225 bits (574), Expect = 1e-56, Method: Composition-based stats. Identities = 67/399 (16%), Positives = 141/399 (35%), Gaps = 15/399 (3%) Query: 286 VMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGL 345 + + + ++E +R+ + S+ + ++ +G L + L + LGY + G Sbjct: 134 DITPLKRAEAALIQAEARWRSLIHNSSDLITILDAQGTVLYHSPVLKRLLGYHPQNCEGK 193 Query: 346 TFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPL 405 + L P+D + Q ++ I+ T ++E R+ +++G + + D Sbjct: 194 SAFGLVHPQDRKQVQQTFQQAITHTEFTLTVEYRFRHQDGSWRFLESTGRNL-LADPAVA 252 Query: 406 YFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIP 465 + DI + KRTE +Q E+ E GI++ + + + +Y Sbjct: 253 GIVVNTRDITDHKRTESALRQAEEKYRSIFENAVEGIFQSSPEGRYIRVNPALARMYGYD 312 Query: 466 PHIKPNWQV----WYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALAN 521 + + V PE R +++I + F+ + I I A Sbjct: 313 SPEELLAHLTDIGRQLYVDPERRAEFQRLIDQQTIV-THFEAQ-VYRRDGSIIWITEHAR 370 Query: 522 RVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMN 581 V + G++ G ++T+ K+ L Q L ++ + +D I Sbjct: 371 AVRDGTGKLLYYEGTVENITDRKRTELQLLQTTSELKAIFQALPDLYFRVDHDSTILDFK 430 Query: 582 PVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGS 641 EE LG + VL I + + ++ + VL G Sbjct: 431 AGRRTDLYLEPEEFLGRRMTDVLPPPVAT--QFSGAIDRILSGEARVDLEYVLPMPDGEQ 488 Query: 642 YDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSY 680 + PL + VI+++T+ ++ +L Sbjct: 489 -TFEARLLPLL-----QTQIIAVIRNITKRKRAENELRQ 521 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 45/323 (13%), Positives = 92/323 (28%), Gaps = 13/323 (4%) Query: 220 IVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLP 279 + + V P + ++ +L P LP L + Sbjct: 444 FLGRRMTDVLPPPVATQFSGAIDRILSGEARVDLEYVLPMPDGEQTFEARLLPLLQTQII 503 Query: 280 ANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQ 339 A + + + + ++E +R+ E + G+ G ++ N AL + GY Sbjct: 504 A--VIRNITKRKRAENELRQAEEKYRSIFENATEGIFQSSPSGSYISANPALARIYGYDS 561 Query: 340 EELRGLTFQQL-----TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAV 394 + + P+ + + + + + E + Y ++G V+W Sbjct: 562 PQELQHHLTDIGRQLYVNPDRRQQFVHSILE----QGQVTDFESQVYRKDGSVIWISENA 617 Query: 395 SLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSW 454 VR G LYF +EDI+ K+ E L + + Sbjct: 618 RAVRDRQGNILYFEGTVEDISARKQAELTIHYQAFHDLLTGLPNRALF--DDRLNQALAD 675 Query: 455 DKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIR 514 +R L + ++V + + + + L D Sbjct: 676 ARRYQHLLAVFFLDLDRFKVINDTLGHAIGDQLLQQVAQRLLPCLREIDTIARWGGDEFT 735 Query: 515 HIRALANRVLNKEGEVERLLGIN 537 + + ERLL Sbjct: 736 LLLPHVQTPADSVKIAERLLASL 758 >UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B341_9CHRO Length = 1342 Score = 918 bits (2373), Expect = 0.0, Method: Composition-based stats. Identities = 162/820 (19%), Positives = 312/820 (38%), Gaps = 44/820 (5%) Query: 286 VMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGL 345 + + + ++ + + + + +G L L S +E G Sbjct: 542 DITERKNAEEATNKINAQMQAIFDAFPDILFRIDQQGTILDYKTQDHHSLYCSPQEFIGR 601 Query: 346 TFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPL 405 T Q++ N + V+K + S+E + + + +P+ Sbjct: 602 TVQEVLPESVGNLLYEGVQKALVS-GEIVSIEYFLIIAL-QKRFFDARIVRL-----SPV 654 Query: 406 YFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIP 465 IA + DI++ K+TE ++ ER+ G+ +L+ + + L+ Sbjct: 655 ETIAVVRDISDRKQTELALRESEERLKTIISTNPNGLLILDLQGKVLFVNPAAEILFGRK 714 Query: 466 PHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLN 525 + ++ + + + + +R +++ Sbjct: 715 QEDLMGQILGIPIIV------------------NNYSEIEILQPSGKLIIVRMRLVKIIW 756 Query: 526 KEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAE 585 E L +D+T+++Q E L + L+ + +VV D I ++NP E Sbjct: 757 --QEKNAFLASLVDVTDIQQAQEQL----KILYQATEQSPVSVVITDAEGTIEYVNPKFE 810 Query: 586 KMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVH 645 K++G+ + E +G + + + I+ TS + ++G + Sbjct: 811 KITGYQRAEVIGQNPRILK--SGETTTEEYKQIWKTITSGQEWHGEFHNKKKNGELFWEA 868 Query: 646 YSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQ 705 SI+P+ +G V V +D+TE + L+Y A++DALT L NR +L+ + Sbjct: 869 ASISPIKNAEGIITHFVAVKEDITERKAQQTTLTYQANYDALTGLPNRFLAIDRLKQAIL 928 Query: 706 TVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEF 765 + +R A++FIDLD FK VND+ GH GD LL++++ + LR SD +ARLGGDEF Sbjct: 929 QADRQKKRVAVMFIDLDHFKDVNDTLGHEYGDLLLQKVSQRLKQCLRKSDTVARLGGDEF 988 Query: 766 GLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQ 824 ++LP+ + IA++I+S++ + F + AS GITL D+ + + +M Sbjct: 989 LIILPNLRETHHCKLIASKILSSL-EKPFNLLTEEAFISASIGITLYPDDGNDVSVLMRN 1047 Query: 825 ADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIP 884 AD A Y K GGR Y R + +K+N+ ++ + R Sbjct: 1048 ADAAMYLGKRGGRNDFKFYTMGMNEEAQSRLRIEK-LLRYALKKNEFYLVYQPIIDLRFQ 1106 Query: 885 EARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV-ASKG 942 + +L W + E + F + L L V + Q+ Sbjct: 1107 T--VIGAEALLRWNNPELGRVSPDQFISIAEETGLISELGAWVISQACQEVVNWQTQGSP 1164 Query: 943 ISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRL 998 I +++ LS + L+ + + + + L L I + +L+ +++L Sbjct: 1165 IWVAVNLSPRQFRESKLLEIISNAITLNGITNHYLELEITEKLLLEDFPGSKGIIEQLHE 1224 Query: 999 AGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGM 1058 R+ + G + L + L +D A++ N L+ I L + Sbjct: 1225 MDFRLSIDDFGTGYSALSYLIKFPFNRLKIDRSFIADIPHNQEVLALVKTIIAMGHGLKL 1284 Query: 1059 KTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 + IA V + L G D G + + Sbjct: 1285 QVIAEGVETTEQANILEAEGCDYAQGYFFSRPLLSEEFRR 1324 Score = 221 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 71/411 (17%), Positives = 158/411 (38%), Gaps = 33/411 (8%) Query: 276 ILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFL 335 I + I M + + + + + + N + + +G+ G+WL N+ Sbjct: 406 IAIYIMISVMDVSQQQGTEESLQKLLRLYTNLTQAAPVGIFRADESGKWLYANEKALLIS 465 Query: 336 GYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVS 395 G S ++ G+ + +D + + K I + ++ E RY + +G+ W L+ Sbjct: 466 GISLDKAIGMGWANYVHNDDRARVFNEWIKSIQTQT-SWRTEYRYRHSDGNNTWVLVQAI 524 Query: 396 LVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWD 455 G + ++ + DI E K E+ ++ ++ +A ++ + + I + Sbjct: 525 PEMDEQGKIVGYLGTLTDITERKNAEEATNKINAQMQAIFDAFPDILFRIDQQGTILDYK 584 Query: 456 KRMFELYEIPPHIKPNWQVWYECVLPEDRQHAE-KVIRDSLQSRSPFKLEFRITVKDGIR 514 + P V + VLPE + + ++ +L S +E+ + + R Sbjct: 585 TQDHHSLYCSPQEFIGRTV--QEVLPESVGNLLYEGVQKALVSGEIVSIEYFLIIALQKR 642 Query: 515 HIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMA 574 A R+ + + D+++ KQ AL + +ERL + + ++ +D+ Sbjct: 643 FFDARIVRL-----SPVETIAVVRDISDRKQTELALRESEERLKTIISTNPNGLLILDLQ 697 Query: 575 MKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVL 634 K+ F+NP AE + G QE+ +G L + + ++ + Sbjct: 698 GKVLFVNPAAEILFGRKQEDLMGQILGIPIIVNN--------------------YSEIEI 737 Query: 635 HCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLS--YSAS 683 SG V + + + + + + DVT+ ++ QL Y A+ Sbjct: 738 LQPSGKLIIVRMRLVKIIWQEKNA--FLASLVDVTDIQQAQEQLKILYQAT 786 Score = 184 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 71/389 (18%), Positives = 149/389 (38%), Gaps = 26/389 (6%) Query: 300 SETHF---RNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYS-QEELRGLTFQQLTWPED 355 SE A+ S +A+ +G N+A + Y +E+ G F Sbjct: 303 SENRISIKEFAITSSISAIAIGDLQGNLTYVNQAFLEMWRYDNDDEVLGKPFLNF----- 357 Query: 356 LNKDLQQVEKLIS--GEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIED 413 + QQ E LI + E ++ + A ++ +LV++ +Y + + D Sbjct: 358 -WQIDQQGETLIQTIRTRGQWIGELIAKKKDKSLFKAQVSANLVKNEANIAIYIMISVMD 416 Query: 414 INELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQ 473 +++ + TE+ Q+L+ T +A +GI+ + +++ + I Sbjct: 417 VSQQQGTEESLQKLLRLYTNLTQAAPVGIFRADESGKWLYANEKALLISGISLDKAIGMG 476 Query: 474 VWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLNKEGEVER 532 W V +DR S+Q+++ ++ E+R DG + A ++++G++ Sbjct: 477 -WANYVHNDDRARVFNEWIKSIQTQTSWRTEYRYRHSDGNNTWVLVQAIPEMDEQGKIVG 535 Query: 533 LLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQ 592 LG D+TE K EA + ++ D+ + + ID I + Sbjct: 536 YLGTLTDITERKNAEEATNKINAQMQAIFDAFPDILFRIDQQGTILDYKTQDHHSLYCSP 595 Query: 593 EEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSY--DVHYSITP 650 +E +G + VL + G L E + A S + + L + ++P Sbjct: 596 QEFIGRTVQEVLPESVG--NLLYEGVQKALVSGEIVSIEYFLIIALQKRFFDARIVRLSP 653 Query: 651 LSTLDGSNIGSVLVIQDVTESRKMLRQLS 679 + T + V++D+++ ++ L Sbjct: 654 VET--------IAVVRDISDRKQTELALR 674 Score = 80.5 bits (198), Expect = 4e-13, Method: Composition-based stats. Identities = 19/123 (15%), Positives = 42/123 (34%), Gaps = 6/123 (4%) Query: 560 TLDSIGEAVVCIDMAMKITFMNPVAEKMSGWT-QEEALGVPLLTVLHITFGDNGPLMENI 618 + S A+ D+ +T++N +M + +E LG P L I E + Sbjct: 313 AITSSISAIAIGDLQGNLTYVNQAFLEMWRYDNDDEVLGKPFLNFWQIDQQG-----ETL 367 Query: 619 YSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQL 678 +R +++ + + S + I ++ + DV++ + L Sbjct: 368 IQTIRTRGQWIGELIAKKKDKSLFKAQVSANLVKNEANIAIYIMISVMDVSQQQGTEESL 427 Query: 679 SYS 681 Sbjct: 428 QKL 430 >UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T5E1_9BURK Length = 1055 Score = 914 bits (2362), Expect = 0.0, Method: Composition-based stats. Identities = 165/846 (19%), Positives = 334/846 (39%), Gaps = 26/846 (3%) Query: 263 YLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEG 322 +++ +L++L + + + ++ ++ FR+ + + M + + Sbjct: 205 FVLLVTMLSGSVLLMLTFGVRENSVREKLRSARALARNDERFRSLFDDHTVPMYIFDRDT 264 Query: 323 -QWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLIS-GEINTYSMEKRY 380 ++L N A + GY++ E G+T + + ++ + + + + + +T + R+ Sbjct: 265 LRFLAVNTAAIEQYGYTESEFLGMTIRAIRPTSEVARLERHLARSADLRQSHTMAGIWRH 324 Query: 381 YNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGI 440 ++G ++ ++ + + +A +D+ + E + + + + Sbjct: 325 RRKDGSIISVNVSYHALNFMGRDASFVLA--DDVTDQINAEAEALRSNQMLEAVIDNIPQ 382 Query: 441 GIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSP 500 I+ +L + + + + + + R+ + P Sbjct: 383 RIFWKDLNSRYLGCNMAFARDAGLAYPEQVVGKSDTDLPWRAFADLLNEHDREVASTGVP 442 Query: 501 -FKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHI 559 E + R + +G+V +LG D+TE K+ + AL Sbjct: 443 KMNFEVDFVIDGVHRTRVTSKLPFTDGDGQVIGVLGSYTDITEQKRADLAL----RLQSR 498 Query: 560 TLDSIGEAVVCIDMA---MKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLME 616 LD+ A++ + I ++NP +++G+ +E +G + + + Sbjct: 499 ALDASVNAILITAPSPSGNLIEYVNPAFMRITGYDLDEVIGHDCRVLQR--DDRDQEGVA 556 Query: 617 NIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLR 676 I A + + V + + G + I P+ +G + VI DVTE + Sbjct: 557 LIREALAANREVSAVVRNYRKDGALFWNQLFIAPVPNAEGVITHHIGVINDVTELIRYQE 616 Query: 677 QLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAG 736 QL Y A++D LT L NR +L L H A+VF+DLD FK VNDS GH+ G Sbjct: 617 QLEYQANYDGLTRLPNRNLLRDRLEHALVVAQRHHTGVAVVFLDLDGFKNVNDSLGHSVG 676 Query: 737 DALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD-CNVESARFIATRIISAVNDYHFIW 795 D LL +A + R+SD +AR GGDEF +++ D + +S R+ +++ + Sbjct: 677 DRLLGVVAERLARCSRTSDTVARHGGDEFVIVMTDTVDEQSLITWMERVRASIAE-PVWL 735 Query: 796 EGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERA 855 +G VG S G +L + A +M +AD+A Y +K+ GR Y+P+ A+ R Sbjct: 736 DGTELYVGCSMGASLFPQDGDDAETLMKKADVAMYRAKDMGRNTFQFYQPEMNASAGARL 795 Query: 856 AMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWS-CEGEIIDEQTFRRSFS 914 + + +++N+ ++ I + + + +L W E ++ +F Sbjct: 796 NLERRLRRA-LRDNEFLLHYQPQVD--IVSGQIVGIEALVRWHDPEAGLVPPSSFIPLAE 852 Query: 915 DPALSHALDRRVFHEFFQQAAKAVAS--KGISISLPLSVAGLSSATLVNDLLEQLENSPL 972 + L L V E +Q +S+ LS + +++ L + L Sbjct: 853 ESGLIGPLSEWVLREACRQNKAWQDQGLPPARVSVNLSARVFQQRNIAKLVMQVLAETGL 912 Query: 973 PPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLL 1028 PR L L + I+ +AE + +L G + + G + LK D L + Sbjct: 913 EPRYLELELTESTIMRNAEEAVLMLNELHALGIGLAIDDFGTGYSSLSYLKRFPVDRLKI 972 Query: 1029 DGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIA 1088 D +++ + DE + + I A L ++ IA V +D L D + G A Sbjct: 973 DRSFVSDIGVSGDDETITSAIIALAHSLKLQVIAEGVETSAQLDFLKERACDEMQGFYFA 1032 Query: 1089 DAQPLD 1094 + Sbjct: 1033 KPLSTE 1038 >UniRef50_Q087W4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q087W4_SHEFN Length = 1144 Score = 912 bits (2359), Expect = 0.0, Method: Composition-based stats. Identities = 158/827 (19%), Positives = 325/827 (39%), Gaps = 25/827 (3%) Query: 280 ANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQ 339 ++ M + + + SE+ +RN + + G +V +G+ +++N++ GY+ Sbjct: 312 IVGVSRDMADRKLIEEQLRRSESTYRNIISTAQDGFVIVSVDGKIIESNQSFADMTGYTL 371 Query: 340 EELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRH 399 +EL + E+ Q + + + ++ ++ ++ G + + +S Sbjct: 372 DELFNKPIGDIETSENHQFSTQNI--ITAKQVKAIHYTSQHKHKLGYLFHVEVNISFWDG 429 Query: 400 TDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWE-WELKPNIFSWDKRM 458 DG FI +DI++ EQ + E + ++ ++ W++ Sbjct: 430 DDGMFFCFI---KDISQRINAEQKLLLSESKFRHIFENIPSISVQGYDKNRSVIFWNQAS 486 Query: 459 FELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLE-FRITVKDGIRHIR 517 +LY ++ + P R+H + + P E + DG Sbjct: 487 EKLYGYTKEQALGKKLEDLIIPPPYREHVINNVNAWINEGVPILAEELLLQRADGSNVAV 546 Query: 518 ALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKI 577 ++ ++N + I++D++ K+ E L ++ +++ ++ KI Sbjct: 547 YSSHTLINNTDNEAEMYCIDIDLSAQKKAEEQALT----LSQAIEQSPISMILTNIDSKI 602 Query: 578 TFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCR 637 ++N EK+SG+ E +G + + L + ++ A ++ A + ++ + Sbjct: 603 EYVNSAFEKISGYAASEVIGQSASMLK--SGLTPKSLYKQLWDAISTGHAWQGELQNRKK 660 Query: 638 SGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFE 697 +G + H I P+ G + + QDVT+ ++ ++ + A +D+LT L NR Sbjct: 661 NGDIFWEHAHIAPIFDNAGVTKHYLALKQDVTQYKQQEEKILHQAHYDSLTGLPNRLLSL 720 Query: 698 KQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVL 757 +L +L+ + A++F+DLD FK VND+ GH+ GD LL + A + + +R SDV+ Sbjct: 721 DRLSQMLKDAHRAKNNVAVLFLDLDDFKKVNDTMGHSVGDELLIQAAVRLKNTIRESDVV 780 Query: 758 ARLGGDEFGLLLPDCNVE-SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNH 816 RLGGDEF ++L + N IA++++ F E R S GI L ++ Sbjct: 781 GRLGGDEFIIILSNINEPIEVEIIASKLLEQFYQ-PFRLENRELVSTISIGIALYPLDSE 839 Query: 817 QAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAH 876 E++ QAD A Y SK+ GR Y Q R + ++ +K+ + + Sbjct: 840 DPKELLRQADSAMYHSKDRGRNTYNFYTHQMNHDMDRRLKIE-EQLRSALKQKEFEVYFQ 898 Query: 877 GVASPRIPEARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAA 935 + + + +L W+ + F L ++ + V F A Sbjct: 899 PFVDIK--SRKIIGAEALLRWNNALLGQVTPDEFIPIAEQTGLIVSIGQYVIEVAFATAK 956 Query: 936 KAVAS--KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESV 993 K + I++ +S T V+ L QL+ + + L I +L + Sbjct: 957 KWQQTYNPYFKIAINVSPKQFRENTFVDMLNIQLDKHQIHASTIELEITEGVLLSSDAVI 1016 Query: 994 Q----KLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITII 1049 + G I + G + L++ + L +D ++ + D L+ Sbjct: 1017 DSNLISINDIGVSISMDDFGTGYSSLSYLRSYPFNTLKVDKSFINDITVDPGDLELVGAA 1076 Query: 1050 QGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 L + +A V L+ + D G + + P Sbjct: 1077 IAMGHGLNLTVVAEGVETEEQYHLLNALKCDYGQGYLFSKPLPQAAF 1123 Score = 222 bits (566), Expect = 7e-56, Method: Composition-based stats. Identities = 77/611 (12%), Positives = 204/611 (33%), Gaps = 41/611 (6%) Query: 105 AVLLRKLLPWYN-PLQNLADWLRLALGSAIVPPLLGGVLV---VLLTPGDDPLRAF-LIW 159 +LL ++ + LQ +A + S I ++ ++ L PG + L+ Sbjct: 12 VLLLALVVIYDAIKLQKIAPKKYGNVLSGIFIGMIAICVMNNPWELRPGIFFDTRWVLLS 71 Query: 160 VLSESIGALALVPLGLLFKPHYLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFI 219 + G + + +L L + + ++ ++ + L W + Sbjct: 72 LSGLFFGFIPTLIATILAACFRLYQGGAGLYVGTLIIFISSAIGLGWRYWMKSANKQP-- 129 Query: 220 IVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLP 279 W + + L ++++ + D L +P + + + L+L Sbjct: 130 ----NWQNLLAMGFVVEIGVLLCLLLMPVADKYDIILTISPTLFTVYTCGTMLIGLLLKQ 185 Query: 280 ANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQ 339 + + + + ++ ++ + +G +L NKA + L + Sbjct: 186 HQQRQQISQELHHHKNLLETEKNLLQSIIDGIPDIIFYKSADGVYLGCNKAFSEALKLNP 245 Query: 340 EELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRH 399 E+++ T L + + ++ ++ E + E+ +G + Sbjct: 246 EDIKHKTDYDLFDRQQADSFIKADRFVLQ-ENQPWMDEEWITTPDGIAHIFKTHKTPFVD 304 Query: 400 TDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMF 459 + G + D+ + K E+ ++ G + I ++ Sbjct: 305 SSGDIQGIVGVSRDMADRKLIEEQLRRSESTYRNIISTAQDGFVIVSVDGKIIESNQSFA 364 Query: 460 ELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRAL 519 ++ N + + E+ Q + + I + Q ++ + K + ++ + Sbjct: 365 DMTGYTLDELFN-KPIGDIETSENHQFSTQNIITAKQVKAIH---YTSQHKHKLGYLFHV 420 Query: 520 ANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVC--IDMAMKI 577 + +G+ D+++ + L + + ++I ++ D + Sbjct: 421 EVNISFWDGDDGMFFCFIKDISQRINAEQKLLLSESKFRHIFENIP-SISVQGYDKNRSV 479 Query: 578 TFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSR-SAIEQDVVLHC 636 F N +EK+ G+T+E+ALG L ++ ++ N+ + + ++++L Sbjct: 480 IFWNQASEKLYGYTKEQALGKKLEDLIIP-PPYREHVINNVNAWINEGVPILAEELLLQR 538 Query: 637 RSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASF 696 G + V+ S T ++ D + D++ +K Q ALT Sbjct: 539 ADGSNVAVYSSHTLINNTDNEAEMY-CIDIDLSAQKKAEEQ--------ALT-------- 581 Query: 697 EKQLRILLQTV 707 L ++ Sbjct: 582 ---LSQAIEQS 589 >UniRef50_Q88QU8 Sensory box protein n=22 Tax=Gammaproteobacteria RepID=Q88QU8_PSEPK Length = 1247 Score = 910 bits (2352), Expect = 0.0, Method: Composition-based stats. Identities = 190/937 (20%), Positives = 360/937 (38%), Gaps = 36/937 (3%) Query: 179 PHYLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLI 238 + L + +E+ +S + L +P + + W ++ P + Sbjct: 312 HYRGLVESLSAIAWEADANDFTYSYVSPHAEDLLGYPLSDWLRPGFWRSILHPEDALWAQ 371 Query: 239 FLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPA------NIMTMVMYAFRA 292 S A L W+ ++ ++ + + + + Sbjct: 372 AYC----DSETAAGRDHSLDYRVIRADGQPLWVRNIVSMIEHGHQPVMRGLMIDISETKR 427 Query: 293 ERKHISESETHFRNAMEYSAIGMALVGT-EGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 + SE F + + + + +G L+ N+A + +G +++ G T L Sbjct: 428 TEDALRLSEQKFASVFQQCPDILLIARHSDGCLLEVNEAFEEQIGLPPDQVIGRTATDLD 487 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 +E+L G ++E + NG + L + DGTP +A Sbjct: 488 LWGVEGSGPLLLERLHQG--GIRNLEMSFRRSNGQLFTGLTSAETFEL-DGTPALVVAV- 543 Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFS-WDKRMFELYEIPPHIKP 470 DI++LK T+Q Q E+ A A G+ + ++ L + Sbjct: 544 RDISQLKETQQQLQTSEEKFAKAFHASPDGLLLSRQSDGLLLEVNEGFCRLTGYDLNPTI 603 Query: 471 NWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEV 530 + + + + ++++ + I DG + L+ R L G V Sbjct: 604 DQTSLDLGIWVDLNER-KRLVDQLNRDGFVRDFTCHIRRSDGQIRLCELSARPLPITG-V 661 Query: 531 ERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGW 590 + +L I D+TE + E L + ++ E V+ D+ +I+ +N +++G+ Sbjct: 662 DCMLTIARDITERHLMQEKL----QLAATVFENTAEGVLITDIDQRISAVNRAFSEITGY 717 Query: 591 TQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITP 650 ++ EALG + + + ++ T+ + ++ ++G Y +I+ Sbjct: 718 SEIEALGQTPRLL--ASGQHDSAFYLAMWHQLTAEGHWQGEIYNKRKNGELYPSWLTISA 775 Query: 651 LSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNST 710 + D V V D++ + +L Y A HD LT L NR FE +L+ +L + Sbjct: 776 VRNSDREITHFVAVFADISSIKHAQAKLDYQAHHDPLTGLPNRTLFENRLQGVLTCAQVS 835 Query: 711 HQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLP 770 +++ A++F+DLDRFK +NDS GH GD LL+ +A + +R D +ARLGGDEF +LLP Sbjct: 836 NRQGAVLFLDLDRFKHINDSLGHPVGDLLLKGIAQRLKEQVRDVDTVARLGGDEFIILLP 895 Query: 771 DCN-VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIAC 829 + A IA ++++ N F AS GI+L + + ++ AD A Sbjct: 896 GLHKPSDASTIANKLLACFNA-PFQAGEHEFFTSASIGISLYPQDGTDVSTLIRNADAAM 954 Query: 830 YASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNL 889 Y SK GR RV Y A SER A+ + + R ++ N++ + S + + Sbjct: 955 YRSKAKGRNRVEAYTRDLTAQASERIALEHELR-RAVERNEMSLCFQPKLSLKTQS--LV 1011 Query: 890 WLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS--KGISIS 946 +L W + + F + L V + +Q +S Sbjct: 1012 GAEALIRWSHPTFGEVPPEHFIHLAEENGTILQLGDWVLEQACRQMQAWKQHYQPFGPLS 1071 Query: 947 LPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCR 1002 + L+ A L L + + L++ L L L I I+ AE + +L+ G + Sbjct: 1072 INLAGAQLRHPHLARRIEQLLKHHQLKAGDLQLEITENFIMSQAEEALAVLYQLKKLGVQ 1131 Query: 1003 IVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIA 1062 + + G + LK D L +D + + D + I + + + IA Sbjct: 1132 LAIDDFGTGYSSLSYLKRLPLDILKIDKSFIRGLPDDPHDAAIARAIIALGRSMQLTIIA 1191 Query: 1063 GPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNS 1099 V L+ G + I G +++ P + + Sbjct: 1192 EGVENQAQQRFLAAEGCEQIQGYIVSLPLPPEEFAAA 1228 Score = 198 bits (505), Expect = 8e-49, Method: Composition-based stats. Identities = 56/426 (13%), Positives = 140/426 (32%), Gaps = 17/426 (3%) Query: 264 LMSHMPWLPFLLILLPA-NIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGT-E 321 L + + + L +++ ++ + A + + SE H+R +E + + Sbjct: 272 LPTVLLLMAVLAVVIRINRRLSSEISRRIALEQELRSSEYHYRGLVESLSAIAWEADAND 331 Query: 322 GQWLQTNKALCQFLGYSQEE-LRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRY 380 + + LGY + LR ++ + PED Q + +S++ R Sbjct: 332 FTYSYVSPHAEDLLGYPLSDWLRPGFWRSILHPED-ALWAQAYCDSETAAGRDHSLDYRV 390 Query: 381 YNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGI 440 +G +W VS++ G + DI+E KRTE + ++ + Sbjct: 391 IRADGQPLWVRNIVSMI--EHGHQPVMRGLMIDISETKRTEDALRLSEQKFASVFQQCPD 448 Query: 441 GIWEWEL-KPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRS 499 + + ++ E +PP + + + ++ + L Sbjct: 449 ILLIARHSDGCLLEVNEAFEEQIGLPPDQVIGRTATDLDLW--GVEGSGPLLLERLHQGG 506 Query: 500 PFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHI 559 LE +G + +G ++ + D++++K+ + L +E+ Sbjct: 507 IRNLEMSFRRSNGQLFTGLTSAETFELDGTPALVVAV-RDISQLKETQQQLQTSEEKFAK 565 Query: 560 TLDSIGEAVVCIDM-AMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENI 618 + + ++ + +N +++G+ + L + + + + Sbjct: 566 AFHASPDGLLLSRQSDGLLLEVNEGFCRLTGYDLNPTIDQTSLDLGIWVDLNER---KRL 622 Query: 619 YSADTSRSAIE-QDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQ 677 + + G S PL + + +D+TE M + Sbjct: 623 VDQLNRDGFVRDFTCHIRRSDGQIRLCELSARPLPIT--GVDCMLTIARDITERHLMQEK 680 Query: 678 LSYSAS 683 L +A+ Sbjct: 681 LQLAAT 686 >UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=2 Tax=Proteobacteria RepID=Q1GXZ6_METFK Length = 1238 Score = 909 bits (2350), Expect = 0.0, Method: Composition-based stats. Identities = 180/919 (19%), Positives = 353/919 (38%), Gaps = 69/919 (7%) Query: 246 VSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFR 305 + +L L+ + + + R + S+ R Sbjct: 330 PLVNWFMAGALFTGIVAGLVLLWNLQIRRRVRERTQALHEEVRQRRMVEMELQSSQEQVR 389 Query: 306 NAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEK 365 ++ G+A+ +GQ+L N A C+ +GYS++EL+ + + L + + + Sbjct: 390 LTFHSASAGIAMTSVDGQFLLVNPAFCEIVGYSEDELKKMHCRDLNDGRNELDAWKNRQW 449 Query: 366 LISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQ 425 L+ G+I+ +EKRY ++G VW ++ SL++ DG+P I +E+I + KR E + Sbjct: 450 LLEGKIDRSVVEKRYTTKSGRSVWVRISASLIKGPDGSPRNLIKVVENIEQQKRQETLQV 509 Query: 426 QLMERITLANEAGGIGIWEW-----------ELKPNIFSWDKRMFELYEIPPHIKPNW-- 472 + + + +L +I DK I + + Sbjct: 510 EQRHLLERIAAGAVLDDVLLATVTLLEEQYPDLMFSIMLLDKANAFARGIALRLPKRYLD 569 Query: 473 QVWYECVLP----------EDRQHAEKVIRDSLQSRSPFKLEFRITVK------------ 510 ++ + P E R I+ L R+ L R ++ Sbjct: 570 KLKGLQIGPAAGSCGTAAYERRTVVVADIQQDLLWRNYRDLARRFGLRACWSMPILSSNQ 629 Query: 511 DGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVC 570 + + V E L+ + + ++ + L ++ + + V+ Sbjct: 630 QVLGTFAVYSREVRVPEQREMELVSACSHIAGIAIERHHSEEQLKLLETSIARLNDIVLI 689 Query: 571 IDMAM------KITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSA--- 621 + +I F+N E++ G+T EE LG + ME ++ Sbjct: 690 AEADSEGKQNPRIIFVNKAFERLMGYTAEEVLGKDPGFLDGPNTQ-----MEELWRVKAL 744 Query: 622 DTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYS 681 ++ ++V + ++G + I P++ G V V +D+TE + ++ + Sbjct: 745 LKQGESVRTELVNYRKNGEEIWLEMDILPIANSAGVFTHWVSVQRDITERKAAESRIQHL 804 Query: 682 ASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLR 741 A +D LT+L NR +L L + AL+F+DLD FK +ND+ GH GD LL Sbjct: 805 AFYDMLTNLPNRLLLLDRLEQALLNSMRLKRSGALLFLDLDNFKTLNDTHGHDFGDMLLE 864 Query: 742 ELASLMLSMLRSSDVLARLGGDEFGLLLPDCN------VESARFIATRIISAVNDYHFIW 795 ++A +L+ +R +D +ARLGGDEF +++ + + + A +A +I+ A++ F Sbjct: 865 QVAQRLLNSVRITDTVARLGGDEFVVVVENLSEQGCNAAQEASLVADKILLALSQ-PFRL 923 Query: 796 EGRVHRVGASAGITLI-DDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSER 854 G H S G+ L ++ E++ +AD+A Y +K GR ++P A ++R Sbjct: 924 SGYEHYSSCSIGVALFCNEQQVTVDELLKRADLAMYEAKAAGRNTFRFFDPAMQALITKR 983 Query: 855 AAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSF 913 AAM D + + ++ +++ + + L +L W + ++ F Sbjct: 984 AAMEEDLR-QALRRDEMRLYYQPQVDSQ---GSLLGAEALVRWEHPQQGLLSPAAFIELA 1039 Query: 914 SDPALSHALDRRVFHEFFQQAAKAVASK---GISISLPLSVAGLSSATLVNDLLEQLENS 970 + L + V Q G+ +S+ +S L ++ + L+ + Sbjct: 1040 EETGLILPIGEWVLRTACMQLVAWAGRPETAGLVLSVNVSARQLHQHDFIDRVFSILKET 1099 Query: 971 PLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYL 1026 P+ L L + ++++ E + L+ G + G LK L Sbjct: 1100 GANPQSLKLELTESTLVENIEEMITKMNILKAMGVGFSMDDFGTGYSSLAYLKRLPLSQL 1159 Query: 1027 LLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEV 1086 +D +V + D ++ I LG++ +A V L G G + Sbjct: 1160 KIDRSFVRDVLVDSNDASIVQTIIALGHGLGIEVVAEGVESWEQQQFLEKHGCLEYQGYL 1219 Query: 1087 IADAQPLDLLVNSSYFAIN 1105 QP + L A+N Sbjct: 1220 FGRPQPAEQLEREFGLAVN 1238 >UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=A0L9T5_MAGSM Length = 1275 Score = 907 bits (2346), Expect = 0.0, Method: Composition-based stats. Identities = 160/692 (23%), Positives = 285/692 (41%), Gaps = 22/692 (3%) Query: 417 LKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKP-NWQVW 475 + + +Q+ + + A IG W W+++ + W K + L + ++ + Sbjct: 575 RAQQLKQLEQIHQDLENAQSVAKIGSWHWDMQKDNLHWSKELVRLLGLEGDTSHASYSTY 634 Query: 476 YECVLPEDRQHAEKVIRDSLQ-SRSPFKLEFRITV--KDGIRHIRALANRVLNKEGEVER 532 E + P+DR + + + + F+ + RI + HI AL + G + Sbjct: 635 LELIHPDDRAKINRQMAAVTRGMQDRFEADHRIICHKSGELLHIHALGIVSRDSRGVPSQ 694 Query: 533 LLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQ 592 ++G D+T K E L + D+ GEA+V D IT +NP +++ G+T+ Sbjct: 695 MVGTLQDVTRRKMAEEGLV----LAKMIFDNAGEAIVITDAQGDITDVNPAYQRIMGYTR 750 Query: 593 EEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLS 652 +E +G + + + E +++ S + ++ +SG + +I + Sbjct: 751 DEIVGQNPSILK--SGRHDEQFYEQMWNEMLSEGHWQGEIWDRRKSGEIFPKWLTIDAIR 808 Query: 653 TLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQ 712 G V + D+T+ ++ QL A +D LT L NRA F +L ++ + Sbjct: 809 DEQGVISNFVGLFMDITQQKETEEQLEKLAYYDPLTELPNRALFRDRLEQEMRLSARGGK 868 Query: 713 RHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC 772 L FIDLDRFK VNDS GH GD LL ++A + LR+SD +ARLGGDEF ++LP Sbjct: 869 SLGLFFIDLDRFKYVNDSLGHDKGDDLLIQVAGRIKHHLRTSDTVARLGGDEFTVILPGI 928 Query: 773 N-VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYA 831 IA I+ ++ + F+ +G +G S GI + D+ + AD A Y Sbjct: 929 EQTNDVARIAGAIVKSLGEV-FVLQGHEVFIGGSIGIAMHPDDGEDYETLTKHADTAMYR 987 Query: 832 SKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWL 891 +K GRG + + R ++ + + ++ NQL + + R + Sbjct: 988 AKEEGRGTYKFFTSDMNEINGRRLSLERALR-QAVECNQLTLHYQPKVDVKQC--RITGM 1044 Query: 892 ISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS--KGISISLP 948 +L W E ++ F + L + V + A + S + +++ Sbjct: 1045 EALVRWNHPEQGLVSPVDFIPIAEETGLIITIGEWVMQQACMDAKRLARSSRHPLQVAIN 1104 Query: 949 LSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRLAGCRIV 1004 LS A LV L L+ S L P LL + I + E + +LR G ++ Sbjct: 1105 LSAKQFQDALLVAKLERSLQQSGLAPELLEVEITESLAMGDVNRTIEQIGELRALGVKVS 1164 Query: 1005 LSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGP 1064 + G + LK + L +D ++ + D +++ I A LG+ +A Sbjct: 1165 IDDFGTGYSSLSYLKKLPLNALKIDKSFIQDLYLDSDDTAIVSSILSMASALGLSVVAEG 1224 Query: 1065 VVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 V + L I G + P + Sbjct: 1225 VENQAQIHFLCEKECPTIQGYFFSKPLPFEAF 1256 Score = 145 bits (368), Expect = 7e-33, Method: Composition-based stats. Identities = 27/194 (13%), Positives = 63/194 (32%), Gaps = 3/194 (1%) Query: 289 AFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQ 348 RK E + + + + + +G N A + +GY+++E+ G Sbjct: 700 QDVTRRKMAEEGLVLAKMIFDNAGEAIVITDAQGDITDVNPAYQRIMGYTRDEIVGQNPS 759 Query: 349 QLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFI 408 L + +Q+ + E + E ++G++ L + +R G F+ Sbjct: 760 ILKSGRHDEQFYEQMWNEMLSE-GHWQGEIWDRRKSGEIFPKWLTIDAIRDEQGVISNFV 818 Query: 409 AQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHI 468 DI + K TE+ ++L L + R + + Sbjct: 819 GLFMDITQQKETEEQLEKLAYYDPLTELPNRALF--RDRLEQEMRLSARGGKSLGLFFID 876 Query: 469 KPNWQVWYECVLPE 482 ++ + + + Sbjct: 877 LDRFKYVNDSLGHD 890 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 46/280 (16%), Positives = 103/280 (36%), Gaps = 10/280 (3%) Query: 275 LILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQF 334 LI L A + Y + K + + NA + IG + L +K L + Sbjct: 561 LISLLAQWVGWEKYRAQQL-KQLEQIHQDLENAQSVAKIGSWHWDMQKDNLHWSKELVRL 619 Query: 335 LGYSQEELRGL--TFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYY-NRNGDVVWAL 391 LG + T+ +L P+D K +Q+ + G + + + R +++G+++ Sbjct: 620 LGLEGDTSHASYSTYLELIHPDDRAKINRQMAAVTRGMQDRFEADHRIICHKSGELLHIH 679 Query: 392 LAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNI 451 + R + G P + ++D+ K E+ + + G I + + +I Sbjct: 680 ALGIVSRDSRGVPSQMVGTLQDVTRRKMAEEGL----VLAKMIFDNAGEAIVITDAQGDI 735 Query: 452 FSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD 511 + + D + + + + + S ++ E K Sbjct: 736 TDVNPAYQRIMGYTRDEIVGQNPSILKSGRHD-EQFYEQMWNEMLSEGHWQGEIWDRRKS 794 Query: 512 GIRHIRA-LANRVLNKEGEVERLLGINMDMTEVKQLNEAL 550 G + + + +++G + +G+ MD+T+ K+ E L Sbjct: 795 GEIFPKWLTIDAIRDEQGVISNFVGLFMDITQQKETEEQL 834 >UniRef50_C9PLR8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PLR8_VIBFU Length = 1097 Score = 907 bits (2344), Expect = 0.0, Method: Composition-based stats. Identities = 172/833 (20%), Positives = 344/833 (41%), Gaps = 28/833 (3%) Query: 285 MVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRG 344 +V+ + + + G+ + +G+ + N+A GYS EE++G Sbjct: 270 LVVIRNTSAQVEAQSEIRRLSEVARQTTNGVVITDVKGRVIWINEAFSFLTGYSIEEMQG 329 Query: 345 LTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTP 404 +L ED + + + + N ++++ Y++ + W +A + + G+ Sbjct: 330 KKPGELLQGEDTDPATVAIMRDALAQQNGFNVDVVNYSKAQNSYWVRIACNPLFSESGSL 389 Query: 405 LYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI 464 +IA DI + K+ E++ + + +A IG W + ++ + + L Sbjct: 390 SGYIAIETDITKEKQDEELIRNSQNLLKAVIDANNIGTWHFNIQTGELIINDKWAALLGY 449 Query: 465 PPHIKP--NWQVWYECVLPEDRQHAEKVIRDSLQSRSP-FKLEFRITVKDGIRHIRALAN 521 N W P+D + ++ + P ++ R+ K+G Sbjct: 450 TLSELLPANRYTWERLTHPDDLAYCTTILEKHVSGLIPIYEANLRMKHKNGEWIWINTRG 509 Query: 522 RV--LNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITF 579 R+ +G+ LLG + D+ + +AL + ++ ++ + + ++ ID KI Sbjct: 510 RISSRTYDGKALWLLGTHFDINDQIIAEKALSDKSRQMEAVVEGLLDGIITIDGRGKILT 569 Query: 580 MNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLM--ENIYSADTSRSAIEQDVVLHCR 637 N A+++ G+T++E LG + ++ ++ I + + +++ + Sbjct: 570 FNQAAQEIFGYTEDETLGKNISMLMGSPHREHHDSYLSNYIERGVSEITGRIRELEALRK 629 Query: 638 SGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFE 697 G + + I + G + V++D+TE ++ ++ A +D LT L NR Sbjct: 630 DGSMFPIELGIVEVQMA-GEV-NFIGVVRDITERKQRENEIHQLAFYDPLTLLPNRRLLL 687 Query: 698 KQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVL 757 +L + T AL F+DLD FK +NDSAGH GD LL ++A +++ +R D + Sbjct: 688 DRLTEAINHSVRTRNFSALFFLDLDNFKNLNDSAGHNKGDLLLGQVAERLVNSVRQGDTV 747 Query: 758 ARLGGDEFGLLLPDCNVE------SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLI 811 ARLGGDEF ++ D + E A +A +I+S + + +G + AS G+TL Sbjct: 748 ARLGGDEFVIIASDLSHEPTLAANQAERLAQKIVSNLTRE-YNLDGLTYNSSASIGVTLF 806 Query: 812 DDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQL 871 + N +++ QAD+A Y +K GR V ++PQ + S RA++ D + I+ Q Sbjct: 807 NSENLPKEDLLKQADMAMYKAKYAGRNGVQFFDPQMQVSVSSRASIVSDL-YSAIQSQQF 865 Query: 872 MMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEF 930 ++ + + + + L W E ++ F + L + V E Sbjct: 866 VLFYQKQVNHLK---QCIGVEVLLRWIHPEKGMVSPLQFIPLAEETGLIVPIGEWVLEEA 922 Query: 931 FQQAAKA---VASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAIL 987 AK + +SI++ +SV S V +L L+ S P+LL L I + Sbjct: 923 CATLAKWSLESEKQHLSIAVNISVVQFSKDNFVQTVLNALKTSGANPQLLKLEITETLLA 982 Query: 988 DHA----ESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDE 1043 ++ +++L+ G + G + LK + L +D ++ + D Sbjct: 983 NNIPDVKAKMKELQQHGVTFSIDDFGTGYSSLSYLKQLPINQLKIDQGFVRDIINSSNDR 1042 Query: 1044 MLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 + + A + ++ IA V L +G G + ++ L Sbjct: 1043 AIAQAVITLADSIELQVIAEGVETEAQRALLQSMGCHTYQGYLYGKPCRIEEL 1095 Score = 150 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 58/292 (19%), Positives = 104/292 (35%), Gaps = 8/292 (2%) Query: 268 MPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQT 327 P L + + + + + I S+ + ++ + IG + L Sbjct: 380 NPLFSESGSLSGYIAIETDITKEKQDEELIRNSQNLLKAVIDANNIGTWHFNIQTGELII 439 Query: 328 NKALCQFLGYSQEELRGLT---FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRN 384 N LGY+ EL +++LT P+DL +EK +SG I Y R ++N Sbjct: 440 NDKWAALLGYTLSELLPANRYTWERLTHPDDLAYCTTILEKHVSGLIPIYEANLRMKHKN 499 Query: 385 GDVVWALLAVSL-VRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIW 443 G+ +W + R DG L+ + DIN+ E+ ++ E GI Sbjct: 500 GEWIWINTRGRISSRTYDGKALWLLGTHFDINDQIIAEKALSDKSRQMEAVVEGLLDGII 559 Query: 444 EWELKPNIFSWDKRMFELYEIPPHIKPNW--QVWYECVLPEDRQ-HAEKVIRDSLQSRSP 500 + + I ++++ E++ + E + I + + Sbjct: 560 TIDGRGKILTFNQAAQEIFGYTEDETLGKNISMLMGSPHREHHDSYLSNYIERGVSEITG 619 Query: 501 FKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQ 552 E KDG L + GEV +G+ D+TE KQ + Q Sbjct: 620 RIRELEALRKDGSMFPIELGIVEVQMAGEVN-FIGVVRDITERKQRENEIHQ 670 Score = 135 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 48/400 (12%), Positives = 131/400 (32%), Gaps = 31/400 (7%) Query: 291 RAERKHISES----ETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + ++ + E + + + ++ ++L + L Q+ + G T Sbjct: 160 KEDQARLQEQFLKGMARTTSILATLPDMVFVIDRNFRFLVCKEH-PDLLK-PQQAILGRT 217 Query: 347 FQQLTWPEDLNKDLQQVEKLISGE---INTYSMEKRYYNRNGDVVWALLAVSLVRHTDGT 403 ++ E ++ ++ +++ + Y+ EK + + + Sbjct: 218 VHEILPNELGHQLVECLKQAFCNNDVIHHNYTFEKSNQS-------FEARYKKIDDNE-- 268 Query: 404 PLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYE 463 + I + + + + R++ G+ ++K + ++ L Sbjct: 269 ---VLVVIRNTSAQVEAQSEIR----RLSEVARQTTNGVVITDVKGRVIWINEAFSFLTG 321 Query: 464 IPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFR-ITVKDGIRHIRALANR 522 + + ++RD+L ++ F ++ + +R N Sbjct: 322 YSIEEMQGKKPGELLQGEDTDPATVAIMRDALAQQNGFNVDVVNYSKAQNSYWVRIACNP 381 Query: 523 VLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNP 582 + ++ G + + I D+T+ KQ E + + L +D+ ++ +N Sbjct: 382 LFSESGSLSGYIAIETDITKEKQDEELIRNSQNLLKAVIDANNIGTWHFNIQTGELIIND 441 Query: 583 VAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSR--SAIEQDVVLHCRSGG 640 + G+T E L T +T D+ I S E ++ + ++G Sbjct: 442 KWAALLGYTLSELLPANRYTWERLTHPDDLAYCTTILEKHVSGLIPIYEANLRMKHKNGE 501 Query: 641 SYDVHY--SITPLSTLDGSNIGSVLVIQDVTESRKMLRQL 678 ++ I+ T DG + + D+ + + L Sbjct: 502 WIWINTRGRISS-RTYDGKALWLLGTHFDINDQIIAEKAL 540 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 42/244 (17%), Positives = 74/244 (30%), Gaps = 11/244 (4%) Query: 277 LLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLG 336 L + K +S+ +E G+ + G+ L N+A + G Sbjct: 520 ALWLLGTHFDINDQIIAEKALSDKSRQMEAVVEGLLDGIITIDGRGKILTFNQAAQEIFG 579 Query: 337 YSQEELRGLTFQQLT---WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLA 393 Y+++E G L E + L + EI E ++G + L Sbjct: 580 YTEDETLGKNISMLMGSPHREHHDSYLSNYIERGVSEITGRIRELEALRKDGSMFPIELG 639 Query: 394 VSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFS 453 + V+ + FI + DI E K+ E QL L + + + S Sbjct: 640 IVEVQMAGE--VNFIGVVRDITERKQRENEIHQLAFYDPLTLLPNRRLLLDRLTEAINHS 697 Query: 454 WDKR-MFELYEIPPHIKPNWQVW-----YECVLPEDRQHAEKVIRDSLQSRSPFKLEFRI 507 R L+ + N + +L + + +R EF I Sbjct: 698 VRTRNFSALFFLDLDNFKNLNDSAGHNKGDLLLGQVAERLVNSVRQGDTVARLGGDEFVI 757 Query: 508 TVKD 511 D Sbjct: 758 IASD 761 >UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n=2 Tax=Proteobacteria RepID=Q2W1Z2_MAGSA Length = 1510 Score = 906 bits (2343), Expect = 0.0, Method: Composition-based stats. Identities = 139/811 (17%), Positives = 291/811 (35%), Gaps = 27/811 (3%) Query: 295 KHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPE 354 ++ + F + + E + N A + G+ +L P Sbjct: 703 AELAAINSDFEGVYNTIDFPIMVFDPELFLKRANGAAVRTYDLPLS-ASGMHIGRLKLPA 761 Query: 355 DLNKDLQQVEKLISGEI-NTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIED 413 L+ + + ++ + ++ + + V+ GTP + + D Sbjct: 762 FLDNIDKSLTAALTEQRKESFQITF-------GKRTFQVFVTPSMSMTGTPQSVVLVVVD 814 Query: 414 INELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQ 473 +L ++ ++ ER+ + + + R EL+ + Sbjct: 815 HTDLVEAQEQIRESQERLLSIMNHSTSAVSLKDAAGRYEFINMRFEELFGLSAEEVIGKT 874 Query: 474 VWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERL 533 + + Q + + S + + + ++ + + G V + Sbjct: 875 D-QQLFSRDIAQLLRSRDLEVMGQLSAIQHLEEMVFPTSKVWLDSVRFPIFDSNGVVRAV 933 Query: 534 LGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQE 593 + D+T E L D GEA+ D + I +N +++G++ + Sbjct: 934 CSQSTDVTMKHHAEEQL----RLAAKVFDRAGEAITITDSSGNIITVNDSFCRITGYSHQ 989 Query: 594 EALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLST 653 E +G + + + ++ + + + ++ ++G Y ++ + Sbjct: 990 EVIGKNPRFLQ--SGKHGKDFYDAMWRSLIEQGCWQGEIFNRRKNGEIYPEWLTVNSVRD 1047 Query: 654 LDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQR 713 +GS + V + D++ + R++ + A+HD LT + NR+ +L+ + + Sbjct: 1048 ENGSVVNYVAIFSDISAIKSSQRRIEFLATHDELTGIPNRSLLMDRLKHAVAQAKRQKTK 1107 Query: 714 HALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN 773 A++FIDLD FK +NDS GH GD LL++ + +R SD LARLGGDEF +L D + Sbjct: 1108 LAVLFIDLDNFKVINDSLGHDVGDQLLKQATERLKHCVRDSDTLARLGGDEFVAVLTDVS 1167 Query: 774 VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASK 833 +E +A RI+ + F + V AS GI++ D+ + ++ AD A Y +K Sbjct: 1168 LEKVNSVAARIVDFLGAS-FSINDKSLFVSASIGISVFPDDGQDSLTLLKHADTAMYRAK 1226 Query: 834 NGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLIS 893 GR + + + +R + + ++ M I + + Sbjct: 1227 ERGRNQYQFFADEMKVIALQRLTLETGLRL-ALETKSFRMCYQPQVD--IHTGEVVGAEA 1283 Query: 894 LKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKG--ISISLPLS 950 L W + F L A+ VF +Q A I++ +S Sbjct: 1284 LLRWRDPTLGEVSPAHFIPIAESCGLIGAIGETVFTMVLEQIAYWREKGLTVPRIAINVS 1343 Query: 951 VAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRLAGCRIVLS 1006 L A + L++S + L+ + + A+++ E + G ++ + Sbjct: 1344 AHQLRDAGFAAKVGSWLDSSGISSELIGIELTESALMERIDMVKEMLTSFDGMGMKVSID 1403 Query: 1007 QVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVV 1066 G + LK L +D + D + I ++ LGM+ +A V Sbjct: 1404 DFGTGYSSLSYLKKLPIHELKIDRSFVDGIALERDDRSIAKAIIDMSRALGMRVVAEGVE 1463 Query: 1067 LPLVMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 + L G D++ G + + Sbjct: 1464 SEEQLGVLKEEGCDMVQGYLFHRPLSPEAFA 1494 Score = 143 bits (362), Expect = 4e-32, Method: Composition-based stats. Identities = 33/230 (14%), Positives = 78/230 (33%), Gaps = 3/230 (1%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 + H E + + + + + G + N + C+ GYS +E+ G + L Sbjct: 941 TMKHHAEEQLRLAAKVFDRAGEAITITDSSGNIITVNDSFCRITGYSHQEVIGKNPRFLQ 1000 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 + + + + E + E +NG++ L V+ VR +G+ + ++A Sbjct: 1001 SGKHGKDFYDAMWRSLI-EQGCWQGEIFNRRKNGEIYPEWLTVNSVRDENGSVVNYVAIF 1059 Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPN 471 DI+ +K +++ + L L + + + KR + N Sbjct: 1060 SDISAIKSSQRRIEFLATHDELT--GIPNRSLLMDRLKHAVAQAKRQKTKLAVLFIDLDN 1117 Query: 472 WQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALAN 521 ++V + + + K + L+ D + + Sbjct: 1118 FKVINDSLGHDVGDQLLKQATERLKHCVRDSDTLARLGGDEFVAVLTDVS 1167 Score = 139 bits (352), Expect = 5e-31, Method: Composition-based stats. Identities = 43/291 (14%), Positives = 96/291 (32%), Gaps = 8/291 (2%) Query: 261 RTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGT 320 RT+ + P + ++ + ++ I ES+ + M +S ++L Sbjct: 789 RTFQVFVTPSMSMTGTPQSVVLVVVDHTDLVEAQEQIRESQERLLSIMNHSTSAVSLKDA 848 Query: 321 EGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRY 380 G++ N + G S EE+ G T QQL + + +++ +E+ Sbjct: 849 AGRYEFINMRFEELFGLSAEEVIGKTDQQLFSRDIAQLLRSRDLEVMGQLSAIQHLEEMV 908 Query: 381 YNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGI 440 + VW + ++G +Q D+ E+ + + + G Sbjct: 909 FPT--SKVWLDSVRFPIFDSNGVVRAVCSQSTDVTMKHHAEEQLRLAAK----VFDRAGE 962 Query: 441 GIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSP 500 I + NI + + + + + + SL + Sbjct: 963 AITITDSSGNIITVNDSFCRITGYSHQEVIGKNPRFLQSGKHGKD-FYDAMWRSLIEQGC 1021 Query: 501 FKLEFRITVKDGIRHIRA-LANRVLNKEGEVERLLGINMDMTEVKQLNEAL 550 ++ E K+G + N V ++ G V + I D++ +K + Sbjct: 1022 WQGEIFNRRKNGEIYPEWLTVNSVRDENGSVVNYVAIFSDISAIKSSQRRI 1072 >UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magnetospirillum RepID=Q2W154_MAGSA Length = 802 Score = 906 bits (2343), Expect = 0.0, Method: Composition-based stats. Identities = 167/804 (20%), Positives = 325/804 (40%), Gaps = 29/804 (3%) Query: 304 FRNAMEYSAIGMALVGT-EGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQ 362 F ++ S +G+++ +G L N+ CQ G + E+ G + ++ +D + Sbjct: 10 FLGILDESPVGVSVSRRRDGLVLFVNRRFCQITGMTPEQCIGHSARRHFADDDQRL---E 66 Query: 363 VEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQ 422 V + + + +++ +G W++L + +A + D+++ K+ EQ Sbjct: 67 VVRQLKEAGEIADADVKFFRVDGSSFWSVLTIRSATLNGEAVN--LAWLYDVSKRKQAEQ 124 Query: 423 VNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPE 482 I ++ GI + I + + ++E P +W + + Sbjct: 125 AILDGKTLIRAMLDSSTDGIVLVNAEGTILAVNAAASAIFEKNSDDLPGKAIW-DHLPDS 183 Query: 483 DRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTE 542 + I L R + I K H+ +A + G+ +R+ + D+T+ Sbjct: 184 VVAPMRRGIDRVLDRRETVESHHAIGAKLFDVHMHLVA----DSVGQRDRVAIFSRDVTQ 239 Query: 543 VKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLT 602 Q + L +L L+ +V+ D I ++N +SG++++E LG Sbjct: 240 SHQRRQQL----RKLETALEQAPVSVMITDSHGAIEYVNRAFVLVSGYSEDEVLGRNPRL 295 Query: 603 VLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSV 662 + + L +++ S + + ++ + G + + +I+P+ DG + Sbjct: 296 LK--SGETVASLYRDMWHCLASGATWQGELCNRAKDGSLFWEYATISPIRDDDGVVTHFM 353 Query: 663 LVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLD 722 V +++T+ ++ +QL + A+HD LT L NR E ++ ++ +R L+F+DLD Sbjct: 354 AVKENITQRKETEQQLVHQATHDTLTGLPNRLLLEDRVHHAIEVAKREGRRIGLMFLDLD 413 Query: 723 RFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARFIA 781 RFK VNDS GH AGD LL+ ++ + LR SD +ARLGGDEF ++L + +A Sbjct: 414 RFKIVNDSLGHVAGDELLKVVSDRLRHTLRRSDTVARLGGDEFVVVLTHFQSTTELAEVA 473 Query: 782 TRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVT 841 +I +A+++ G VGAS GI + D+ +M AD A Y +K GR Sbjct: 474 EKISAALDE-PVELSGHKVHVGASIGIAIYPDDGDNFNALMKDADTAMYRAKQKGRNTFC 532 Query: 842 VYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWS-CE 900 Y+ +R + + R + + + + R + +L W+ E Sbjct: 533 FYDSNMNDEALDRLKLE-EALRRALVRGEFQLFYQPQVDLQ--TGRTSGVEALIRWNSPE 589 Query: 901 GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK--GISISLPLSVAGLSSAT 958 + F + L + V E +Q A + GI +++ +S + Sbjct: 590 RGQVSPALFIPVAEESNLISMIGWWVLEESCRQIAAWREAGLTGIKVAVNVSGRQFLNHA 649 Query: 959 LVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRLAGCRIVLSQVGRDLQI 1014 LV + + + + P L + + ++ E + +LR G ++ + G Sbjct: 650 LVECISDLMAQYAVLPSQLEIELTESTVMAEPDRAIEQLTRLREIGIQVSVDDFGTGYSS 709 Query: 1015 FNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTL 1074 + LK + +D +V + +++ I G A L M +A V L Sbjct: 710 LSYLKRLPLSTIKVDRSFVRDVNNQSDNAAIVSAILGLADALDMSIVAEGVETEGEEQHL 769 Query: 1075 SGIGVDLIYGEVIADAQPLDLLVN 1098 G + G A P D L Sbjct: 770 KDAGCIKVQGFRYAKPMPADQLAA 793 Score = 147 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 37/251 (14%), Positives = 81/251 (32%), Gaps = 11/251 (4%) Query: 266 SHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWL 325 + + + + + + A+E + + + + + G Sbjct: 212 LFDVHMHLVADSVGQRDRVAIFSRDVTQSHQRRQQLRKLETALEQAPVSVMITDSHGAIE 271 Query: 326 QTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNG 385 N+A GYS++E+ G + L E + + + ++ T+ E ++G Sbjct: 272 YVNRAFVLVSGYSEDEVLGRNPRLLKSGETVASLYRDMWHCLAS-GATWQGELCNRAKDG 330 Query: 386 DVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEW 445 + W +S +R DG +F+A E+I + K TEQ TL + Sbjct: 331 SLFWEYATISPIRDDDGVVTHFMAVKENITQRKETEQQLVHQATHDTLTGLPNR--LLLE 388 Query: 446 ELKPNIFSWDKRMFELYEIPPHIKPNWQVWYE---CVLPEDR-----QHAEKVIRDSLQS 497 + + KR + +++ + V ++ +R S Sbjct: 389 DRVHHAIEVAKREGRRIGLMFLDLDRFKIVNDSLGHVAGDELLKVVSDRLRHTLRRSDTV 448 Query: 498 RSPFKLEFRIT 508 EF + Sbjct: 449 ARLGGDEFVVV 459 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 36/269 (13%), Positives = 86/269 (31%), Gaps = 12/269 (4%) Query: 286 VMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGL 345 + + + I + +T R ++ S G+ LV EG L N A + ++L G Sbjct: 115 DVSKRKQAEQAILDGKTLIRAMLDSSTDGIVLVNAEGTILAVNAAASAIFEKNSDDLPGK 174 Query: 346 TFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPL 405 + + +++++ T + + + LV + G Sbjct: 175 AIWDHLPDSVVAPMRRGIDRVL-DRRETVESHHAIGAK-----LFDVHMHLVADSVGQRD 228 Query: 406 YFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIP 465 D+ + + Q ++L A E + + + I ++ + Sbjct: 229 RVAIFSRDVTQSHQRRQQLRKLE----TALEQAPVSVMITDSHGAIEYVNRAFVLVSGYS 284 Query: 466 PHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRA-LANRVL 524 E + + L S + ++ E KDG + + Sbjct: 285 EDEVLGRNP-RLLKSGETVASLYRDMWHCLASGATWQGELCNRAKDGSLFWEYATISPIR 343 Query: 525 NKEGEVERLLGINMDMTEVKQLNEALFQE 553 + +G V + + ++T+ K+ + L + Sbjct: 344 DDDGVVTHFMAVKENITQRKETEQQLVHQ 372 >UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WZ79_METML Length = 1250 Score = 905 bits (2341), Expect = 0.0, Method: Composition-based stats. Identities = 170/844 (20%), Positives = 332/844 (39%), Gaps = 40/844 (4%) Query: 280 ANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVG-TEGQWLQTNKALCQFLGYS 338 + + + I ++E++ N + + + + N A+ + G S Sbjct: 416 SRGTVQDVTERQNSEALIRKTESYLTNILNSVEEVIWTASAPDFRVNHVNAAIEKLCGLS 475 Query: 339 QEELRG--LTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSL 396 Q+ L + L P+D + ++ + E ++ ++E R +G V W + + Sbjct: 476 QQALIDDIEVWINLIHPDDCAQAKLAMKAVF--EQSSVALEYRIVLADGTVRWVSDSRHV 533 Query: 397 VRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGI-WEWELKPNIFSWD 455 V G + I D+ + +++ ER+ E I + + + Sbjct: 534 VYGESGESAELVCVIHDVTAKRLAADADRESKERVIQMLETSPIAVRIATSSGDKVLFAN 593 Query: 456 KRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRH 515 KR EL PP E+ + ++ V+ Sbjct: 594 KRYTELINCPPDAVMGRNPKLYYAHAEEYDALLAQVNSGHAINDKL---IQLIVEGKGPV 650 Query: 516 IRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSI---------GE 566 + R ++ EG +LG D+T++++ +AL + +L+ + Sbjct: 651 WAMASYRPVHYEGTAA-ILGWFYDVTDLRRAQDALLLSEALAKQSLEELKYQKYALDKHA 709 Query: 567 AVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRS 626 V D+ +IT+ N ++SG++ EE LG + + + +Y + Sbjct: 710 IVAVTDVKGRITYANDKFSEISGYSIEELLGQDHAIL--NSGYHPKGYFKEMYRTVANGQ 767 Query: 627 AIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDA 686 ++ + G Y V +I P DG + + D+T+ + + +Y A +D Sbjct: 768 VWHDEICNRAKDGSLYWVDTTIAPFIGDDGKPQSYISIRTDITQRKAAEDKSNYLALYDP 827 Query: 687 LTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASL 746 LT+L NR +L L + T + AL+F+DLD FK +ND+ GH GD LL+++A Sbjct: 828 LTNLPNRRLLLDRLTHALASAMRTGRGGALLFLDLDHFKTLNDTLGHDVGDLLLQQVAEC 887 Query: 747 MLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIA------TRIISAVNDYHFIWEGRVH 800 + + +R D +ARLGGDEF ++L + + A +I++ + + ++G + Sbjct: 888 LTACVREGDTVARLGGDEFVVILEGLSEQEVEAAAQAEVVGEKILNKFIE-PYQFKGYEY 946 Query: 801 RVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLD 860 + +S GITL NN ++ E++ QADIA Y +K GR ++ ++P+ R M + Sbjct: 947 HITSSVGITLFGKNNLKSDELLKQADIAMYQAKKLGRNALSFFDPKMQEGIQARVDMEHE 1006 Query: 861 EQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALS 919 + + + +N+ + R + +L W E +I F D + Sbjct: 1007 LR-KALDKNEFQLFYQMQVGL---SDRAVGAEALIRWIHPERGLIPPNEFVSIAEDCGMI 1062 Query: 920 HALDRRVFHEFFQQAAKAVAS---KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRL 976 ++ V Q + S + +++S+ +S A V + + + P L Sbjct: 1063 LSIGAWVIDTACAQLKRWEQSERTRSLTLSVNVSAKQFRQADFVEQVTTAIARHGINPML 1122 Query: 977 LHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGEL 1032 L L + A+LDH E + L+ G R L G L+ L +D Sbjct: 1123 LKLELTESALLDHIEDAVAIMNALKDIGIRFSLDDFGTGYSSLQYLRLLPLYQLKIDRSF 1182 Query: 1033 CANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQP 1092 ++ ++ ++ ++ I A L + IA V + L G G + ++ P Sbjct: 1183 VRDIASSIGNQAIVRTIIAMAHTLNLNVIAEGVETQVQQGILLDSGCMHYQGYLFSEPVP 1242 Query: 1093 LDLL 1096 +D Sbjct: 1243 IDAF 1246 Score = 169 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 74/472 (15%), Positives = 155/472 (32%), Gaps = 20/472 (4%) Query: 217 TFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSL---MMAADPSLLATPRTYLMSHMPWLPF 273 I++ WS L R L + + + P T + + Sbjct: 223 ILFILVAFWSIFYLWRAYRALHSTLGASADEVYQHIFRVGAGDFSIPITVKPAQDNSVLA 282 Query: 274 LLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQ 333 L + + + + + + S+ A + +G + L ++ + Sbjct: 283 ELAKMQSLLHAHDVERT-HAEQSLHRSKALLVEAQHIAQVGSWSLDWLTGELIWSEEIYH 341 Query: 334 FLGYSQEELRG--LTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWAL 391 Q + F P D + + Y + R +G V W Sbjct: 342 IFETDQHQFHANYEAFLNAVHPCDREAVDCAFKASVVSHTP-YEITHRLLLADGSVKWVH 400 Query: 392 LAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWE-LKPN 450 + G P Y ++D+ E + +E + ++ +T + IW Sbjct: 401 ERGTSDYDAAGNPTYSRGTVQDVTERQNSEALIRKTESYLTNILNSVEEVIWTASAPDFR 460 Query: 451 IFSWDKRMFELYEIPPHIKP-NWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITV 509 + + + +L + + +VW + P+D A+ ++ + +S LE+RI + Sbjct: 461 VNHVNAAIEKLCGLSQQALIDDIEVWINLIHPDDCAQAKLAMKAVFE-QSSVALEYRIVL 519 Query: 510 KDG-IRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAV 568 DG +R + + V + GE L+ + D+T + +A + KER+ L++ AV Sbjct: 520 ADGTVRWVSDSRHVVYGESGESAELVCVIHDVTAKRLAADADRESKERVIQMLETSPIAV 579 Query: 569 VCIDMAM-KITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSA 627 + K+ F N ++ + +G + + + + S A Sbjct: 580 RIATSSGDKVLFANKRYTELINCPPDAVMGRNPKLYYA-----HAEEYDALLAQVNSGHA 634 Query: 628 IEQDVVLHCRSG-GSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQL 678 I ++ G G S P+ + DVT+ R+ L Sbjct: 635 INDKLIQLIVEGKGPVWAMASYRPVHYE--GTAAILGWFYDVTDLRRAQDAL 684 Score = 54.3 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 65/198 (32%), Gaps = 7/198 (3%) Query: 498 RSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGI--NMDMTEVKQLNEALFQEKE 555 ++ FR+ D I + + E+ ++ + D+ E ++L + K Sbjct: 252 DEVYQHIFRVGAGDFSIPITVKPAQDNSVLAELAKMQSLLHAHDV-ERTHAEQSLHRSKA 310 Query: 556 RLHITLDSIGEAVVCID-MAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPL 614 L +D + ++ + + Q + + + D + Sbjct: 311 LLVEAQHIAQVGSWSLDWLTGELI-WSEEIYHIFETDQHQFHANYEAFLNAVHPCDREAV 369 Query: 615 MENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKM 674 ++ S + E L G VH T G+ S +QDVTE + Sbjct: 370 DCAFKASVVSHTPYEITHRLLLADGSVKWVHERGTSDYDAAGNPTYSRGTVQDVTERQNS 429 Query: 675 LRQLSYSASHDALTHLAN 692 + + S+ LT++ N Sbjct: 430 EALIRKTESY--LTNILN 445 >UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q21SZ9_RHOFD Length = 1169 Score = 904 bits (2337), Expect = 0.0, Method: Composition-based stats. Identities = 148/744 (19%), Positives = 288/744 (38%), Gaps = 28/744 (3%) Query: 367 ISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQ 426 ++ S E R +W +L S + G+ + + L+ Q+ Sbjct: 433 LTRRNEQQSAELRQRALQERWLWTVLGGSALVFA-GSAYFLLRLRRSNRMLEALNTQVQR 491 Query: 427 LMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQH 486 ++ +A ++ L + +L P V + + PE Sbjct: 492 SQNQLQATFDAIPDPLFVLGLDGRYYDCRSSRADLLAAPAEDLIGKTV-SDVLPPEAASI 550 Query: 487 AEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQL 546 +R++ + + +F + + G R + + R + ++ D+TE KQ Sbjct: 551 CLSALREANEKGTSTGKQFELQLAHGRAWFELSVARKSVGQRQEPRFIVLSRDITERKQA 610 Query: 547 NEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHI 606 EAL + E + D + +N +++G++ +E +G + Sbjct: 611 EEAL----RIAATAFE-SQEGMTVTDAQGAVLRINRAFTEITGYSADEVVGHNPRLLQ-- 663 Query: 607 TFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQ 666 + + ++ + + + ++ ++G +Y SIT + G V Sbjct: 664 SGRHDKAFYAAMWESIRRTGSWQGEIWNRRKNGEAYPELLSITAVKENGGIVTHYVGTFM 723 Query: 667 DVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKA 726 D+T + ++ A D T L NR +L+ L ++ AL+ IDLD FK Sbjct: 724 DITRRKAAEDEIRNLAFFDLQTGLPNRRLLLDRLQQALAASARHRRQGALLLIDLDNFKT 783 Query: 727 VNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE------SARFI 780 +ND+ GH GD LL+++A + S + +ARLGGDEF ++L + + A + Sbjct: 784 LNDTLGHDKGDLLLQQVAQRLASCVHEGGTVARLGGDEFVVMLENLSEHLEAAATQAETL 843 Query: 781 ATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRV 840 A RI++++ + +G ++ AS GITL + +++ +AD+A Y +K GR + Sbjct: 844 AKRILASLKQT-YSLDGYEYQSTASIGITLFSEQQETTEDLLKRADLAMYQAKAVGRNTL 902 Query: 841 TVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SC 899 ++P+ A + RAA+ + R + ++ ++ + +L W Sbjct: 903 RFFDPEMQAVVTSRAALEAGLR-RAVTSDEFLLYYQAQVDGQ---GHLTGCEALLRWQHP 958 Query: 900 EGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK---GISISLPLSVAGLSS 956 E ++ F D L L R V Q A+ +++++ +SV Sbjct: 959 ERGLVAPGEFIALAEDTGLILPLGRWVLDAACTQLAQWATRPEMAHLTVAVNVSVRQFHQ 1018 Query: 957 ATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLSQVGRDL 1012 A VN +L L+++ P+ L L + ++ E + L+ G L G Sbjct: 1019 ADFVNQVLTVLDSTGTNPQRLKLELTESLLIGDVEDVIAKMSILKEKGVGFSLDDFGTGY 1078 Query: 1013 QIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMD 1072 + LK D L +D N+ + D + ++ LG+ IA V + D Sbjct: 1079 SSLSYLKRLPLDQLKIDQGFVRNILIDPNDAAIARMVIALGDSLGLAVIAEGVEIEAQRD 1138 Query: 1073 TLSGIGVDLIYGEVIADAQPLDLL 1096 L+ +G G + PLD Sbjct: 1139 FLARLGCHACQGYLFCRPLPLDQF 1162 Score = 150 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 56/402 (13%), Positives = 104/402 (25%), Gaps = 24/402 (5%) Query: 154 RAFLIWVLSESIGALALVPLGLLFKPHYLLRHRNP---------------RLLFESLLTL 198 RA L +G ALV G + L R + F+++ Sbjct: 447 RALQERWLWTVLGGSALVFAGSAYFLLRLRRSNRMLEALNTQVQRSQNQLQATFDAIPDP 506 Query: 199 AITLTL-SWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLL 257 L L + + + + S Sbjct: 507 LFVLGLDGRYYDCRSSRADLLAAPAEDLIGKTVSDVLPPEAASICLSALREANEKGTSTG 566 Query: 258 ATPRTYLMSHMPWLPFLLILLPANIMTM----VMYAFRAERKHISESETHFRNAMEYSAI 313 L W + V+ ERK E+ A E S Sbjct: 567 KQFELQLAHGRAWFELSVARKSVGQRQEPRFIVLSRDITERKQAEEALRIAATAFE-SQE 625 Query: 314 GMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINT 373 GM + +G L+ N+A + GYS +E+ G + L + + I + Sbjct: 626 GMTVTDAQGAVLRINRAFTEITGYSADEVVGHNPRLLQSGRHDKAFYAAMWESIR-RTGS 684 Query: 374 YSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITL 433 + E +NG+ LL+++ V+ G +++ DI K E + L Sbjct: 685 WQGEIWNRRKNGEAYPELLSITAVKENGGIVTHYVGTFMDITRRKAAEDEIRNLAFFDLQ 744 Query: 434 ANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRD 493 + + + R + N++ + + + + + Sbjct: 745 TGLPNRRLL--LDRLQQALAASARHRRQGALLLIDLDNFKTLNDTLGHDKGDLLLQQVAQ 802 Query: 494 SLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLG 535 L S D + + L L Sbjct: 803 RLASCVHEGGTVARLGGDEFVVMLENLSEHLEAAATQAETLA 844 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 41/301 (13%), Positives = 90/301 (29%), Gaps = 15/301 (4%) Query: 256 LLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHI----SESETHFRNAMEYS 311 L L+ + + + + + S+ + + Sbjct: 444 LRQRALQERWLWTVLGGSALVFAGSAYFLLRLRRSNRMLEALNTQVQRSQNQLQATFDAI 503 Query: 312 AIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLIS-GE 370 + ++G +G++ + L E+L G T + PE + L + + G Sbjct: 504 PDPLFVLGLDGRYYDCRSSRADLLAAPAEDLIGKTVSDVLPPEAASICLSALREANEKGT 563 Query: 371 INTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMER 430 E + + W L+V+ FI DI E K+ E+ + Sbjct: 564 STGKQFELQLAH---GRAWFELSVARKSVGQRQEPRFIVLSRDITERKQAEEALRIAATA 620 Query: 431 ITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKV 490 G+ + + + ++ E+ D + Sbjct: 621 FE-----SQEGMTVTDAQGAVLRINRAFTEITGYSADEVVGHNPRLLQSGRHD-KAFYAA 674 Query: 491 IRDSLQSRSPFKLEFRITVKDGIRHIRALANR-VLNKEGEVERLLGINMDMTEVKQLNEA 549 + +S++ ++ E K+G + L+ V G V +G MD+T K + Sbjct: 675 MWESIRRTGSWQGEIWNRRKNGEAYPELLSITAVKENGGIVTHYVGTFMDITRRKAAEDE 734 Query: 550 L 550 + Sbjct: 735 I 735 Score = 72.0 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 27/192 (14%), Positives = 63/192 (32%), Gaps = 3/192 (1%) Query: 488 EKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLN 547 ++ I + + E R L L G LL + ++ LN Sbjct: 427 QREINELTRRNEQQSAELRQRALQERWLWTVLGGSALVFAGSAYFLLRLRRSNRMLEALN 486 Query: 548 EALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHIT 607 + + + +L T D+I + + + + + + E+ +G + VL Sbjct: 487 TQVQRSQNQLQATFDAIPDPLFVLGLDGRYYDCRSSRADLLAAPAEDLIGKTVSDVLPPE 546 Query: 608 FGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQD 667 + + A+ ++ + L G + S+ S +++ +D Sbjct: 547 AA--SICLSALREANEKGTSTGKQFELQLAHGRA-WFELSVARKSVGQRQEPRFIVLSRD 603 Query: 668 VTESRKMLRQLS 679 +TE ++ L Sbjct: 604 ITERKQAEEALR 615 >UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6N2_9PROT Length = 1043 Score = 899 bits (2323), Expect = 0.0, Method: Composition-based stats. Identities = 138/698 (19%), Positives = 271/698 (38%), Gaps = 30/698 (4%) Query: 418 KRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYE 477 +++ +R+ L + GIW + N + ++ P + + Sbjct: 349 RQSRSAVAASEQRLRLILGSVSNGIWGLDKDGNTTFVNAAAADMLGYTPEELFDKPMHAT 408 Query: 478 CVL--PE--DRQHAEKVIRDSLQSRSP-FKLEFRITVKDGIRHIRALANRVLNKEGEVER 532 P+ + +L P ++ + KDG ++ + GE+E Sbjct: 409 IHHSYPDGTHYPAERCPMHATLVDGKPRMGIDEVLWRKDGSELYVDYSSHPIRSHGEMEG 468 Query: 533 LLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQ 592 + + D++E +Q +EAL + S + ++ D +I +NP +++G+T Sbjct: 469 AVVVFEDISERRQKDEAL----KLASSVYQSSNDGILVTDEKNRILDVNPAFTRITGYTL 524 Query: 593 EEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLS 652 E+ G + + + ++ + + ++ ++G + SI+ + Sbjct: 525 EDVRGKDPGIFQ--SGKHDAQFYQQMWQSILDDGHWQGEIWDLKKNGELHAKWLSISVIR 582 Query: 653 TLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQ 712 DGS V D+TE ++ + A+ D LT+L NR F + R + + + Sbjct: 583 RADGSIYRHVGQFSDITEKKRKDELIWEQANFDTLTNLPNRRLFADRFRQAISAGARSGR 642 Query: 713 RHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC 772 AL+ +DLD+FK +ND+ GH+ GD LL E+A + S +R D +AR+GGDEF ++L Sbjct: 643 YGALLSLDLDQFKRLNDTFGHSMGDKLLIEVARRLTSCVREEDTVARMGGDEFLVILNGL 702 Query: 773 NVES------ARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQAD 826 E A IA +I + + + + H +S GI L ++ +++ D Sbjct: 703 GSEQNEAAIRAELIAEKIRNELCR-PYQLDKTEHHSSSSIGIVLFRGHSDDPERLLAHVD 761 Query: 827 IACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEA 886 A Y SK GR + ++ +R + + ++ + ++ Sbjct: 762 TAMYQSKAKGRNAICFFDSSMQEILEKRGQLETALRG-ALERKEFLLHYQLQMD---SSG 817 Query: 887 RNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK---G 942 R + +L W + + + F + L + V Q A+ + Sbjct: 818 RPIGAEALLRWNNAKLGSVSPVQFIPVAEESGLILPIGHWVLETACAQLARWQSDPRFNR 877 Query: 943 ISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRL 998 + I++ +S A V + L+ S + P LL L + +LD ++ L+ Sbjct: 878 LCIAVNVSAIQFREAAFVAKVRNVLQQSGIQPWLLKLELTESLVLDDINDSILKMEALKN 937 Query: 999 AGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGM 1058 G + + G + L D L +D ++ + D ++ I A LGM Sbjct: 938 LGVKFSMDDFGTGYSSLSYLSRLPLDQLKIDQSFVRDITTDQHDAAIVQTIISMALSLGM 997 Query: 1059 KTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 + IA V + L G G + A P++ L Sbjct: 998 EVIAEGVETEEQREFLDLRGCQAYQGYLYAKPMPIEEL 1035 Score = 169 bits (428), Expect = 8e-40, Method: Composition-based stats. Identities = 43/292 (14%), Positives = 102/292 (34%), Gaps = 10/292 (3%) Query: 267 HMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQ 326 + WL + LL +T + R R ++ SE R + + G+ + +G Sbjct: 325 LLLWLLGSVTLLTVVSLTFYFRSIRQSRSAVAASEQRLRLILGSVSNGIWGLDKDGNTTF 384 Query: 327 TNKALCQFLGYSQEELRGLTFQQLTW---PE--DLNKDLQQVEKLISGEINTYSMEKRYY 381 N A LGY+ EEL P+ + + + +++ + Sbjct: 385 VNAAAADMLGYTPEELFDKPMHATIHHSYPDGTHYPAERCPMHATLVDGKPRMGIDEVLW 444 Query: 382 NRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIG 441 ++G ++ + +R + G + EDI+E ++ ++ + + ++ G Sbjct: 445 RKDGSELYVDYSSHPIR-SHGEMEGAVVVFEDISERRQKDEALKLA----SSVYQSSNDG 499 Query: 442 IWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPF 501 I + K I + + D Q +++ + L Sbjct: 500 ILVTDEKNRILDVNPAFTRITGYTLEDVRGKDPGIFQSGKHDAQFYQQMWQSILDDGHWQ 559 Query: 502 KLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQE 553 + + + + + +G + R +G D+TE K+ +E ++++ Sbjct: 560 GEIWDLKKNGELHAKWLSISVIRRADGSIYRHVGQFSDITEKKRKDELIWEQ 611 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 40/256 (15%), Positives = 84/256 (32%), Gaps = 7/256 (2%) Query: 280 ANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQ 339 A ++ + R + + + + + S G+ + + + L N A + GY+ Sbjct: 469 AVVVFEDISERRQKDEALK----LASSVYQSSNDGILVTDEKNRILDVNPAFTRITGYTL 524 Query: 340 EELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRH 399 E++RG + + QQ+ + I + + E +NG++ L++S++R Sbjct: 525 EDVRGKDPGIFQSGKHDAQFYQQMWQSILDD-GHWQGEIWDLKKNGELHAKWLSISVIRR 583 Query: 400 TDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMF 459 DG+ + Q DI E KR +++ + TL N + S R Sbjct: 584 ADGSIYRHVGQFSDITEKKRKDELIWEQANFDTLTNLPNRRLFA--DRFRQAISAGARSG 641 Query: 460 ELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRAL 519 + ++ + + L S + D I Sbjct: 642 RYGALLSLDLDQFKRLNDTFGHSMGDKLLIEVARRLTSCVREEDTVARMGGDEFLVILNG 701 Query: 520 ANRVLNKEGEVERLLG 535 N+ L+ Sbjct: 702 LGSEQNEAAIRAELIA 717 >UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KAZ1_AZOSB Length = 952 Score = 898 bits (2322), Expect = 0.0, Method: Composition-based stats. Identities = 157/696 (22%), Positives = 281/696 (40%), Gaps = 22/696 (3%) Query: 416 ELKRTEQVNQQLMERITLANEAGGIGIWEWELK---PNIFSWDKRMFELYEIPPHIKPNW 472 EL R + + +R+ + + + + Sbjct: 262 ELVRERAALRTMTQRLEEVLDCSPSVNYTLTRGEEGWVGTWMSHNLTRMTGFSVAEALAQ 321 Query: 473 QVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLNKEGEVE 531 W V P+D + A + +R + + E+RI DG +R IR V ++ G V Sbjct: 322 GWWARTVHPDDLERASRAVRAVEEDGH-YVHEYRIRCADGGVRWIRDELRAVRDEGGRVV 380 Query: 532 RLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWT 591 R+ G+ +D+TE +Q E L ++S + VV D+ I +N +++G++ Sbjct: 381 RVAGVWIDITEQRQATELL----RLNSAVIESTHDGVVLTDLDGAIVAVNRAFTEVTGYS 436 Query: 592 QEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPL 651 ++E +G + + + ++++A + ++ ++G + ++ + Sbjct: 437 RDEVVGQNPRFLQ--SGRHDRGFYLSMWAALKEAGHWQGELWNRRKNGELFPEWLTLNAV 494 Query: 652 STLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTH 711 G V V D+++ ++ +L Y A HD LT L NR +L L Sbjct: 495 RNEVGHVTHYVGVFTDISKLKQTEDRLDYLAHHDPLTDLPNRLLVLSRLEHALDGAQRRG 554 Query: 712 QRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD 771 R A++F+DLDRFK VNDS GHAAGD LLR +A+ + LR D L RLGGDEF +LL Sbjct: 555 CRVAVMFLDLDRFKTVNDSLGHAAGDELLRAVAARLRGALREEDTLGRLGGDEFMVLLEH 614 Query: 772 CN-VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACY 830 A +A ++ + + G + AS GI+ D+ ++ AD A Y Sbjct: 615 VEAPADAAVVAKNLVEVLAAPFALSNGHEVFIRASIGISFYPDDGDDFMTLVRNADAAMY 674 Query: 831 ASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLW 890 +K GR Y + +ER A+ R ++ ++ ++ V + + R L Sbjct: 675 RAKAQGRNTYGFYTEDLIRSATERLALET-RLRRALEHDEFVVYYQPV--LGVKDGRLLG 731 Query: 891 LISLKLWSCEGE-IIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKG--ISISL 947 +L W +GE ++ F + L AL V + +Q + + + +++ Sbjct: 732 AEALVRWKPQGEPMVSPAAFIPVAEETGLIVALGEWVLRDACRQVREWIDAGYAFGQVAV 791 Query: 948 PLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRI 1003 LS + L L + LP L L I ++L+ E +++L+ G + Sbjct: 792 NLSAEQFRRQDVSAMLATVLAETGLPATQLELEITESSLLEAGEHAVGLLERLKQQGVGL 851 Query: 1004 VLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAG 1063 + G LK D L +D ++ + D + + I A+ L M A Sbjct: 852 AIDDFGTGYSSLAYLKRFSIDKLKIDRSFVQDIADDSNDLAIASAIVAMARALDMAVQAE 911 Query: 1064 PVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNS 1099 V ++ L G+G G + + P D Sbjct: 912 GVEGEAQLELLRGLGCGSYQGYLCSPPLPADEFEAR 947 Score = 153 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 72/409 (17%), Positives = 132/409 (32%), Gaps = 42/409 (10%) Query: 201 TLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATP 260 + +L L + + L + +R R I + T A +L Sbjct: 179 GAEPCAVDVLLLDYMLPGLNALDLTKVLRQQRRLDIPIVMVTG--QGSEQTAAQALRLGV 236 Query: 261 RTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGT 320 YL+ H +L L ++L ER + ++ S + Sbjct: 237 SDYLVKHESYLHELPLVLDKAF---RQAELVRERAALRTMTQRLEEVLDCSPSVNYTLTR 293 Query: 321 E-----GQWLQTNKALCQFLGYSQEELRGLTFQQL-TWPEDLNKDLQQVEKLISGEINTY 374 G W+ N L + G+S E + P+DL + + V + E Y Sbjct: 294 GEEGWVGTWMSHN--LTRMTGFSVAEALAQGWWARTVHPDDLERASRAVRAV--EEDGHY 349 Query: 375 SMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLA 434 E R +G V W + VR G + DI E ++ ++ + + Sbjct: 350 VHEYRIRCADGGVRWIRDELRAVRDEGGRVVRVAGVWIDITEQRQATELLR----LNSAV 405 Query: 435 NEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDS 494 E+ G+ +L I + ++ E+ + DR + + Sbjct: 406 IESTHDGVVLTDLDGAIVAVNRAFTEVTGYSRDEVVGQNPRFLQSGRHDRG-FYLSMWAA 464 Query: 495 LQSRSPFKLEFRITVKDGIRHIRALA-NRVLNKEGEVERLLGINMDMTEVKQLNEALFQE 553 L+ ++ E K+G L N V N+ G V +G+ D++++KQ + L Sbjct: 465 LKEAGHWQGELWNRRKNGELFPEWLTLNAVRNEVGHVTHYVGVFTDISKLKQTEDRLDYL 524 Query: 554 KE---------------RLHITLDSIG-----EAVVCIDMAMKITFMNP 582 RL LD AV+ +D+ + +N Sbjct: 525 AHHDPLTDLPNRLLVLSRLEHALDGAQRRGCRVAVMFLDLD-RFKTVND 572 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 34/236 (14%), Positives = 81/236 (34%), Gaps = 3/236 (1%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 E++ +E +E + G+ L +G + N+A + GYS++E+ G + L Sbjct: 390 TEQRQATELLRLNSAVIESTHDGVVLTDLDGAIVAVNRAFTEVTGYSRDEVVGQNPRFLQ 449 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 + + E + E +NG++ L ++ VR+ G +++ Sbjct: 450 SGRHDRGFYLSMWAALK-EAGHWQGELWNRRKNGELFPEWLTLNAVRNEVGHVTHYVGVF 508 Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPN 471 DI++LK+TE L L + + + L+ + +R + + Sbjct: 509 TDISKLKQTEDRLDYLAHHDPLTDLPNRLLVLS-RLEHALDGAQRRGCRV-AVMFLDLDR 566 Query: 472 WQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKE 527 ++ + + + + L+ + D + + Sbjct: 567 FKTVNDSLGHAAGDELLRAVAARLRGALREEDTLGRLGGDEFMVLLEHVEAPADAA 622 >UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZD9_9PROT Length = 1149 Score = 898 bits (2321), Expect = 0.0, Method: Composition-based stats. Identities = 155/870 (17%), Positives = 309/870 (35%), Gaps = 69/870 (7%) Query: 289 AFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQ 348 R + +++S + R ++ + +G +G + + + L G Sbjct: 282 QIRLRTQQLADSSSQLRATLDAIPDLLFEIGLDGHFYSYHSSRNDLLTAPATSFIGKKIG 341 Query: 349 QLTWPEDLNKDLQQVEKL-ISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYF 407 + P+ + + +++ ++G N + G+ W L++S + F Sbjct: 342 DVLPPDAADICMSALQEANMTGRSNGKTYALSL--PQGES-WFELSISKKQDAKNQAPRF 398 Query: 408 IAQIEDINELKRTEQVNQQLMERITLANEAGGIGI----------WEWELKPNIFSWDKR 457 I + D+ + K E +L + ++ + N Sbjct: 399 IVLVRDVTQRKVNETHILRLTKLYAALSQCNQAIVRCSNKTELFPIICRDAVNFGGMKMA 458 Query: 458 MFELY-------------EIPPHIKPNWQVWYECVLP-----------EDRQHAEKVIR- 492 + N V + P EDR + Sbjct: 459 WIGILDQVTGLVEPVASYGAGTEYLDNLHVSIDGHEPGGSGPTGIALREDRPFWCQDFAN 518 Query: 493 ---------DSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVER--LLGINMDMT 541 + + + + L N E R LL + MD++ Sbjct: 519 DPVTAVWHERAAEYGWGASASIPLHCHGIVVGTLTLYAEEKNAFDEPARNLLLEMAMDIS 578 Query: 542 ---EVKQLNEA---LFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEA 595 E + + +L + ++ ++V D+ I + N K++G++ +E Sbjct: 579 FALERFDAETERKKMSETLLKLSLAVEQSPNSIVITDLDANIEYANSNFTKVTGYSLDEV 638 Query: 596 LGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLD 655 LG + + E++++ T + ++ + G Y I+P+S +D Sbjct: 639 LGKNPRFMQ--SGKTPKATYEDMWAHLTRGEPWKGELFNRRKDGTEYIESVLISPVSQVD 696 Query: 656 GSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHA 715 G + + + +D+TE R ++ D LT L NR ++ + L + ++ Sbjct: 697 GRVMNYLAIKEDITEKRLTEERIEKLEHFDHLTGLPNRTQLNERFKYALSLAQRSGEQMT 756 Query: 716 LVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE 775 ++F+DLD FK +ND+ GH+ GD LL ++A + LR D ++R GGDEF L+LP + Sbjct: 757 VMFLDLDHFKDINDTLGHSIGDQLLMDVAKRLKETLRDEDTVSRQGGDEFILILPGTDEN 816 Query: 776 SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNG 835 A +A +++ AV+ F +E S GI + + + AD A Y K+ Sbjct: 817 GAAHVAAKLMEAVSQA-FQFEQHELVATCSIGIAIYPHDGENFETLSKNADTAMYRVKHD 875 Query: 836 GRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLK 895 GR + + A + + + + QL + S + + + +L Sbjct: 876 GRNGFCFFTSEMQAHSARTLQL-GNALRHALTRGQLHLHYQPQISTQ--DGHVVGAEALL 932 Query: 896 LW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV--ASKGISISLPLSVA 952 W E I F D + V +Q + + +++ LS A Sbjct: 933 RWQHPELGSISPAEFIPIAEDNGQIIPIGEWVLRTAIKQLKDWMDSGLPPMIMAVNLSAA 992 Query: 953 GLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLSQV 1008 + L+ + L+ S +P R L L + +D + + KL G ++ + Sbjct: 993 QFRQSNLMELVTSILDESKVPHRYLELELTEAVAMDDPQLAIGVMDKLHTGGIKMSIDDF 1052 Query: 1009 GRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLP 1068 G + LK L +D ++ + D+ ++ I A LGM+TIA V Sbjct: 1053 GTGYSSLSYLKRFKVYKLKIDQSFVHDITDDPDDKAIVAAIINMASSLGMQTIAEGVETA 1112 Query: 1069 LVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 + L G + + G + P + V+ Sbjct: 1113 GQLSFLRLQGCNEVQGYYFSKPLPAEQFVS 1142 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 57/458 (12%), Positives = 136/458 (29%), Gaps = 43/458 (9%) Query: 225 WSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMT 284 +AV R + + + + +L P LL + Sbjct: 521 VTAVWHERAAEYGWGASASIPLHCHGIVVGTLTLYAEEKNAFDEPARNLLLEMAMDISFA 580 Query: 285 MVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRG 344 + + ERK +SE+ A+E S + + + N + GYS +E+ G Sbjct: 581 LERFDAETERKKMSETLLKLSLAVEQSPNSIVITDLDANIEYANSNFTKVTGYSLDEVLG 640 Query: 345 LTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTP 404 + + + + + ++ + E ++G + +S V DG Sbjct: 641 KNPRFMQSGKTPKATYEDMWAHLT-RGEPWKGELFNRRKDGTEYIESVLISPVSQVDGRV 699 Query: 405 LYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNI-FSWDKRMFELYE 463 + ++A EDI E + TE+ ++L L + + S +R E Sbjct: 700 MNYLAIKEDITEKRLTEERIEKLEHFDHLTGLPNRT---QLNERFKYALSLAQRSGEQMT 756 Query: 464 IPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRV 523 + +++ + + + + + + + E ++ + G I L Sbjct: 757 VMFLDLDHFKDINDTLGHSIGDQLL--MDVAKRLKETLRDEDTVSRQGGDEFILIL--PG 812 Query: 524 LNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAM-KITFMNP 582 ++ G + +++ Q + H + + + ++ Sbjct: 813 TDENGAAHVAAKLMEAVSQAFQFEQ---------HELVATCSIGIAIYPHDGENFETLSK 863 Query: 583 VA-EKMSGWTQEEALGVP-LLTVLHITFGDNGPLME---NIYSADTSRS-AIEQDVVLHC 636 A M + G + ++ + A T + + Sbjct: 864 NADTAMYRVKHD---GRNGFCFFTSEMQAHSARTLQLGNALRHALTRGQLHLHYQPQIST 920 Query: 637 RSGGS----------YDVHYSIT-----PLSTLDGSNI 659 + G + SI+ P++ +G I Sbjct: 921 QDGHVVGAEALLRWQHPELGSISPAEFIPIAEDNGQII 958 >UniRef50_C7RN47 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RN47_9PROT Length = 1542 Score = 897 bits (2320), Expect = 0.0, Method: Composition-based stats. Identities = 157/822 (19%), Positives = 311/822 (37%), Gaps = 24/822 (2%) Query: 283 MTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEEL 342 + V + + E T + + ++ + N A + + Sbjct: 723 LATVNEELQIKTAETQELNTELESIQNSVDYPLLVLDRNASLQRFNSAAARLFKLGAAQ- 781 Query: 343 RGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDG 402 G + L P D+ L V+ +I + +++ N N L ++ + Sbjct: 782 TGRHLRDLPLPPDMPDLLADVQHVIDTQNAR---DRQIVNAN--RRHYALHIAPLLRDTQ 836 Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELY 462 I D L E+ ++ R+ + + + + + + Sbjct: 837 RIAGVILLFADNTSLYEVERSARETQVRLQAVMNNSVSLMAVKDAPGRYQFANPKFEQTF 896 Query: 463 EIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANR 522 + + ++++ R + E + + G RH + Sbjct: 897 GFATGEVIGKTDL-QLFPEAVSDLFRESELEAIRLRKGIEREESLPLAAGERHFLVVRFP 955 Query: 523 VLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNP 582 + + +G + L D+T K+ E L + D E V+ D +I +N Sbjct: 956 LFDDDGAITGLCFQATDITARKRAEEQL----RLAALVFDRASEGVMVTDTEQRILTIND 1011 Query: 583 VAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSY 642 ++G+T++E +G + + ++ T + ++ ++G Y Sbjct: 1012 SFSTLTGYTRQEVVGKTPRLLR--SDRMPREFYAEMWDKVTRLGVWQGEIWNRRKNGEPY 1069 Query: 643 DVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRI 702 SI + +G + V + D+T+ R+ +++ Y A+HD LT L NRA F +L + Sbjct: 1070 LEWLSINTVKDKNGKVVNYVGMFSDITKVRESQQRIEYLATHDELTGLPNRALFNDRLNL 1129 Query: 703 LLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGG 762 L + + +VFIDLD FK VND+ GH GD LL++ A +L +R+ D +ARLGG Sbjct: 1130 ALAHAERSRESVGVVFIDLDNFKVVNDTLGHETGDKLLKQAAMRLLECVRAEDTVARLGG 1189 Query: 763 DEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVM 822 DEF +LL + + + A A R+++ ++ + + + AS G+++ ++ A +M Sbjct: 1190 DEFVVLLVNADRQQATLTAERLLTGLS-TSYHFGEHECFISASIGLSMFPEDASDANSLM 1248 Query: 823 SQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPR 882 AD A Y +K+ G+ + A+ S+R A+ + R I+ +L + Sbjct: 1249 RNADSAMYRAKDHGKNGFRFFSADLASQASKRLALETGLR-RAIENGELFVHYQPQVRLE 1307 Query: 883 IPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA--VAS 940 + +L W GE+ID F L A+D V E +Q + Sbjct: 1308 CDT--VVGAEALVRWRYNGEVIDPVVFIPIAEQSHLIFAIDDWVLGEACRQIIEWDRAGL 1365 Query: 941 KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKL 996 + IS+ +S + DL++ + + P+ L + I ++ + + +L Sbjct: 1366 PPLRISVNISARHFRKDGMAADLMDIVSAHGVSPQRLCIEITEGVLM-DVDRAQRMLAEL 1424 Query: 997 RLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRL 1056 +G RI + G + LK L + + + D + ++I A++L Sbjct: 1425 VESGLRISIDDFGTGFSSLSYLKRFPIHELKIARSFVDGISTDADDRAIASVIISLARQL 1484 Query: 1057 GMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 GM + + L G G + A D + Sbjct: 1485 GMSVVGEGIERTGQHAELEAFGCHRGQGFLYAQPLAPDAFAD 1526 Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats. Identities = 38/272 (13%), Positives = 96/272 (35%), Gaps = 9/272 (3%) Query: 256 LLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGM 315 L A R +L+ P + + A + + + + ++ G+ Sbjct: 942 LAAGERHFLVVRFPLFDDDGAITGLCFQATDITARKRAEEQLR----LAALVFDRASEGV 997 Query: 316 ALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYS 375 + TE + L N + GY+++E+ G T + L + ++ ++ + + Sbjct: 998 MVTDTEQRILTINDSFSTLTGYTRQEVVGKTPRLLRSDRMPREFYAEMWDKVT-RLGVWQ 1056 Query: 376 MEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLAN 435 E +NG+ L+++ V+ +G + ++ DI +++ ++Q + L L Sbjct: 1057 GEIWNRRKNGEPYLEWLSINTVKDKNGKVVNYVGMFSDITKVRESQQRIEYLATHDELTG 1116 Query: 436 EAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSL 495 + + +R E + N++V + + E K + ++ Sbjct: 1117 LPNRALF--NDRLNLALAHAERSRESVGVVFIDLDNFKVVNDTLGHETGDKLLK--QAAM 1172 Query: 496 QSRSPFKLEFRITVKDGIRHIRALANRVLNKE 527 + + E + G + L N + Sbjct: 1173 RLLECVRAEDTVARLGGDEFVVLLVNADRQQA 1204 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 48/291 (16%), Positives = 97/291 (33%), Gaps = 8/291 (2%) Query: 261 RTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGT 320 R Y + P L + ++ + + E++ + M S MA+ Sbjct: 822 RHYALHIAPLLRDTQRIAGVILLFADNTSLYEVERSARETQVRLQAVMNNSVSLMAVKDA 881 Query: 321 EGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRY 380 G++ N Q G++ E+ G T QL + + + I E+ Sbjct: 882 PGRYQFANPKFEQTFGFATGEVIGKTDLQLFPEAVSDLFRESELEAIRLRKGI-EREESL 940 Query: 381 YNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGI 440 G+ L+ + DG Q DI KR E+ + L + Sbjct: 941 PLAAGE-RHFLVVRFPLFDDDGAITGLCFQATDITARKRAEEQLRLAA----LVFDRASE 995 Query: 441 GIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSP 500 G+ + + I + + L R+ + D + Sbjct: 996 GVMVTDTEQRILTINDSFSTLTGYTRQEVVGKTPRLLRSDRMPRE-FYAEMWDKVTRLGV 1054 Query: 501 FKLEFRITVKDGIRHIRALAN-RVLNKEGEVERLLGINMDMTEVKQLNEAL 550 ++ E K+G ++ L+ V +K G+V +G+ D+T+V++ + + Sbjct: 1055 WQGEIWNRRKNGEPYLEWLSINTVKDKNGKVVNYVGMFSDITKVRESQQRI 1105 >UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KEH4_CYAP7 Length = 1027 Score = 895 bits (2313), Expect = 0.0, Method: Composition-based stats. Identities = 157/818 (19%), Positives = 317/818 (38%), Gaps = 44/818 (5%) Query: 286 VMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGL 345 M + + + + + + + +G L Q L + EE+ G Sbjct: 235 DMTEQKNAEEVTTHINQEIQALFDAFPDILFRINDQGIILDYKLQEQQLLSTAPEEVIGK 294 Query: 346 TFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPL 405 + Q++ N+ + +++++ S+E + + + Sbjct: 295 SIQEVFPEPIGNQLYEGIQQVLL-TRQPLSLEYSLNIEDKKRF-FEARIVQL-----NQT 347 Query: 406 YFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIP 465 IA I DI+ K TE ++ ER++ G+ + + + + L+ P Sbjct: 348 EIIAVIRDISARKHTELALRESEERLSTIISTNPNGLLILDREGKVLFVNPAAEILFGRP 407 Query: 466 PHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLN 525 I + + + + R ++L Sbjct: 408 KKDLMGQ------------------ILGLPIIVNNYSEIEILQPTGKMVIARIRQVKILW 449 Query: 526 KEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAE 585 +E E L +D+T++K + L + L + +V+ D I ++N E Sbjct: 450 EEKEA--FLASLVDVTDLKGAQKQL----KILKQATEQSPVSVIITDAEGHIEYVNRKFE 503 Query: 586 KMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVH 645 K++G+T++E +G + + + ++ TS + ++G + Sbjct: 504 KLTGYTRQEVIGKNPRLLKSGKISQDQ--YKQLWRTLTSGQEWHGEFHNQKKNGELFWES 561 Query: 646 YSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQ 705 SI+P+ +G + + +D+T + R L+Y A++DALT L NR +L++ + Sbjct: 562 ASISPIKNEEGVITHFIAIKEDITRRKAQDRILAYQANYDALTGLPNRFLAIDRLKLAIL 621 Query: 706 TVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEF 765 QR A++FIDLDRFK VND+ GH GD LL+++A + LR SD +ARLGGDEF Sbjct: 622 QAERQEQRVAVMFIDLDRFKNVNDTLGHEYGDLLLKQVAERLKKCLRKSDTVARLGGDEF 681 Query: 766 GLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQ 824 +++P+ + IA +I+S++ + F + AS GITL D+ +M Sbjct: 682 LIIIPNLKQPSHCKGIAKKILSSL-EKPFNLLEEEAFISASIGITLYPDDGDDVNALMRN 740 Query: 825 ADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIP 884 AD A Y K GGR Y + R + + + +K+ ++ ++ + + Sbjct: 741 ADTAMYLGKRGGRNDFKFYTLGMNETNRTRIIIE-NLLHQALKKKEIYLVYQPIM--ELK 797 Query: 885 EARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK-G 942 + + +L W + + + F + L + L V + Q+ + A Sbjct: 798 TEKVIGAEALLRWNNPQLGQVSPDQFIPIAEETGLINQLGAWVISQACQEVVQWKAQGTP 857 Query: 943 ISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRL 998 IS+++ LS + L+ + + + + + L L I + +L+ + + +L Sbjct: 858 ISVAVNLSPRQFRDSKLLKIITDAIAVNGITNHDLELEITEKLLLEDSPGSQGILSQLHQ 917 Query: 999 AGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGM 1058 + + G + L + L +D ++ + L+ I + L + Sbjct: 918 MNFPLSIDDFGTGYSALSYLIKFPFNRLKIDRSFITDMTHSQKAMGLVKTIIAMSHGLNL 977 Query: 1059 KTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 + IA V +++L G D G + + Sbjct: 978 QVIAEGVETSEQLNSLKSQGCDYAQGYFFSRPLTGEEF 1015 Score = 124 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 94/274 (34%), Gaps = 31/274 (11%) Query: 280 ANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQ 339 + + A + + ESE + + G+ ++ EG+ L N A G + Sbjct: 349 IIAVIRDISARKHTELALRESEERLSTIISTNPNGLLILDREGKVLFVNPAAEILFGRPK 408 Query: 340 EELRGL--TFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLV 397 ++L G + N YS E G +V A + + Sbjct: 409 KDLMGQILGLPIIV--------------------NNYS-EIEILQPTGKMVIARIRQVKI 447 Query: 398 RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKR 457 + F+A + D+ +LK ++ + + A E + + + + +I +++ Sbjct: 448 LWEEKEA--FLASLVDVTDLKGAQKQLKI----LKQATEQSPVSVIITDAEGHIEYVNRK 501 Query: 458 MFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIR 517 +L + +++ R +L S + EF K+G Sbjct: 502 FEKLTGYTRQEVIGKNPRLLKSGKISQDQYKQLWR-TLTSGQEWHGEFHNQKKNGELFWE 560 Query: 518 A-LANRVLNKEGEVERLLGINMDMTEVKQLNEAL 550 + + + N+EG + + I D+T K + L Sbjct: 561 SASISPIKNEEGVITHFIAIKEDITRRKAQDRIL 594 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 52/301 (17%), Positives = 111/301 (36%), Gaps = 38/301 (12%) Query: 379 RYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAG 438 R N + L+ G + ++ + D+ E K E+V + + I +A Sbjct: 209 RIRRLNQSITEKELS--------GKSIGYLNNLTDMTEQKNAEEVTTHINQEIQALFDAF 260 Query: 439 GIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQ-HAEKVIRDSLQS 497 ++ + I + + +L P + + V PE + I+ L + Sbjct: 261 PDILFRINDQGIILDYKLQEQQLLSTAPEEVIGKSI--QEVFPEPIGNQLYEGIQQVLLT 318 Query: 498 RSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERL 557 R P LE+ + ++D R A ++ ++ + D++ K AL + +ERL Sbjct: 319 RQPLSLEYSLNIEDKKRFFEARIVQL-----NQTEIIAVIRDISARKHTELALRESEERL 373 Query: 558 HITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMEN 617 + + ++ +D K+ F+NP AE + G +++ +G L + + Sbjct: 374 STIISTNPNGLLILDREGKVLFVNPAAEILFGRPKKDLMGQILGLPIIVNN--------- 424 Query: 618 IYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQ 677 ++ + +G V I + L + + DVT+ + +Q Sbjct: 425 -----------YSEIEILQPTGKM--VIARIRQVKILWEEKEAFLASLVDVTDLKGAQKQ 471 Query: 678 L 678 L Sbjct: 472 L 472 >UniRef50_D0IUW1 Diguanylate cyclase/phosphodiesterase with n=3 Tax=Comamonadaceae RepID=D0IUW1_COMTE Length = 900 Score = 894 bits (2312), Expect = 0.0, Method: Composition-based stats. Identities = 191/885 (21%), Positives = 350/885 (39%), Gaps = 26/885 (2%) Query: 229 RLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMY 288 L ++L M+ A S + ++ L A + + + Sbjct: 9 ALTPWVIVTLYLCVGMLWLGAQAGVLGYFDVS-LNRQSLRWQIGLFIVWLLATALIALWF 67 Query: 289 AFRAER--KHISESETHFRNAMEYSAIGMALVGTEG-QWLQTNKALCQFLGYSQEELRGL 345 R R + E+ + ++ GMA V G + + N L +LG S E LRG Sbjct: 68 MQRKARADQRGRETAQELELVVRHAPAGMARVHVGGAEIVWANAKLAGWLGCSVESLRGQ 127 Query: 346 TFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRN-GDVVWALLAVSLV--RHTDG 402 F+ L D + Q+++L+ G + + + ++ N + G V L S V DG Sbjct: 128 DFRVLVPVNDQDDVALQLQRLLDGSTDYFQVLRQCVNADTGKVTPVLCTTSRVAASGVDG 187 Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELY 462 P+ + ++D++E+ + + LA E G G+WEW+ ++ M L Sbjct: 188 -PVALVCVLQDLSEMVSARNAMMRSETMLRLALEGSGNGVWEWDALEQRLNFSTGMSALL 246 Query: 463 EIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGI-RHIRALAN 521 +++ + PED A +L+ S L R+ DG+ R RA Sbjct: 247 RYQGQDLAREFDFHQRLHPEDAAGARAQAEQALEQGSMLVLTARLLCFDGLYRWFRARGQ 306 Query: 522 RVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMN 581 ++ G + R+ G+ D T ++ +E +D+ E VV D +I +N Sbjct: 307 AYKDESGRLIRISGLLSDQTASREADERS----RLASTVVDNTIEGVVVTDAHSRILSVN 362 Query: 582 PVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGS 641 K+ G+++ E LG + + + ++++ + + ++ ++G Sbjct: 363 HAFTKLLGFSEAEMLGKTPRMFK--SGRHDKAFYDAMWASMHATGHWQGEIWNRRKNGEV 420 Query: 642 YDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLR 701 + S++ + + V + D++ + +QL + A D LT L NR+ F + L Sbjct: 421 FPERMSLSAVKDANDKVTHYVCMFTDISAEKAREQQLEFLAHRDTLTGLPNRSQFTRMLG 480 Query: 702 ILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLG 761 ++ ST++R A++ ++DRFK VNDS GH+ GD +LR ++ M LR D++ RL Sbjct: 481 EAVELSQSTNRRMAVLLFNIDRFKDVNDSYGHSIGDEVLRHVSVQMQGALRHGDIIGRLA 540 Query: 762 GDEFGLL-LPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAE 820 GDE ++ C +SA +A R+++A +G V SAGI L D+ A + Sbjct: 541 GDEICVVAQSICGRDSAVDVAERLMAAAGQPWTTPDGLSVVVSVSAGICLYPDHALTADD 600 Query: 821 VMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVAS 880 ++ A A Y +K G + A ER A+ R ++ + + Sbjct: 601 LLQGAHAAVYGAKARGSNAWCFFHENMTQAARERLALEA-RLRRALELGHMRLYYQPQI- 658 Query: 881 PRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV- 938 + R + +L W E +I F + + L V E +Q + Sbjct: 659 -ELATGRLVGAEALLRWLDPEEGLISPARFIPVAENSGVIGPLGLWVLGEACRQGQQWRA 717 Query: 939 -ASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----V 993 ++I++ +S+ + E L S P LL L I A+ + E + Sbjct: 718 AGLPDLAIAVNVSLHQFLLTDIAGATAEALNKSGFPASLLELEITESALAEKPEEALAVL 777 Query: 994 QKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHA 1053 +LR G R+ + G LK D L +D ++ + D + + + Sbjct: 778 NRLRELGLRLAIDDFGTGYSSLAHLKRFPLDLLKIDQGFIRDIPHSADDMTISSSVIALG 837 Query: 1054 QRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 +G+K +A V + L G D G + P + Sbjct: 838 HAMGLKVLAEGVETQEQLSFLQQKGCDYFQGYFCSRPLPAEDFTR 882 >UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT5_BREBN Length = 815 Score = 894 bits (2310), Expect = 0.0, Method: Composition-based stats. Identities = 159/818 (19%), Positives = 326/818 (39%), Gaps = 41/818 (5%) Query: 306 NAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEK 365 +A+E S++ +++ +G N CQ +++EEL G + + + + Sbjct: 13 SALEESSV-ISITDEKGIITYVNHNFCQLSKFNREELIGKSHNIVDSGFHPRNYFKSLWD 71 Query: 366 LISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQ 425 IS + E + ++G W + + + G ++A DI + K E+ Sbjct: 72 TIS-RGKVWKGEMKNRGKDGTEYWLSMTLVPFMNDSGFLYQYVAIGTDITKRKLMEESLA 130 Query: 426 QLMERITLANEAGGI--GIWEWELKPNIFSWDKRMFELYEIPPHIKPN--WQVWYECVLP 481 + M+ + A + + K I + + E+ +V Sbjct: 131 KTMKDLHDIKNALDESSIVAITDDKGVITYVNDKFCEISRYEVDELVGNTHRVINSRYHS 190 Query: 482 EDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLNKEGEVERLLGINMDM 540 + K++ ++++ +K E + KDG + L+ G + + I D+ Sbjct: 191 ---KSFFKLMWETIKQGRVWKGEVKNRAKDGTEYWMNTTIVPFLDDRGVPYQYVSIRTDI 247 Query: 541 TEVKQLNEALFQEKE-RLHITLDSIGEAV--VCIDMAMKITFM---NPVAEKMSGWTQEE 594 T+ + AL + + T+ ++ V + D IT+ +AE++ G T E Sbjct: 248 TDRIEAETALAEALQNDFRRTVQNLQNCVFKIVTDQRGNITYTLCEGKIAEEL-GLTSER 306 Query: 595 ALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTL 654 L + + + + ++ ++ L SG Y + +++P+ Sbjct: 307 MLRKTSYEIFPYEVAEQMESY---FRRAFAGESVTFELKL---SGNDYYI--TLSPI-EE 357 Query: 655 DGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRH 714 +G + V + D+TE +K + Y A +D+LT+L NR F ++L + ++ Sbjct: 358 NGEIVEMVGSMIDITERKKAEETIRYMAHYDSLTNLPNRTLFHEKLAEAMLKAKQKDEKI 417 Query: 715 ALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNV 774 ++FIDLDRFK +ND+ GH+ GD LL+ +A+ ++ LR D ++RLGGDEF + L Sbjct: 418 GVMFIDLDRFKNINDTLGHSIGDVLLQAVANRLICCLRKEDSVSRLGGDEFAIFLTGVTH 477 Query: 775 ESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKN 834 A IA RII+++++ + + S GI++ D+ ++ AD A Y +K Sbjct: 478 REAGEIAQRIITSMSES-ITLDHIEIFITPSIGISMYPDDGDDIEALLKHADAAMYLAKE 536 Query: 835 GGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISL 894 G+ + + +++ + + + + + E Q + + + + + +L Sbjct: 537 QGKNNYQFFSEELHQVLAKKLQLERELR-KALDEKQFTLHYQPKI--HLQTGQIIGMEAL 593 Query: 895 KLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK--GISISLPLSV 951 W + +I F + L L V QQ + +++++ +S+ Sbjct: 594 IRWDHPDLGLIPPIQFIPIAEETGLIVPLGEWVMRTACQQTKAWQEAGFTQLAVAVNISL 653 Query: 952 AGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILD---HAESVQKLRLAGCRIVLSQV 1008 L+ + LE + L P+ L L I L+ + +L+ G I + Sbjct: 654 RQFMQNNLIEMITSILEETGLAPQYLELEITESMALNVDYTIRILNRLKALGVSISIDDF 713 Query: 1009 GRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLP 1068 G + L D L +D N+ N ++ +I I A + + IA V Sbjct: 714 GTGYSSLSYLSQFPIDRLKIDQSFLRNL--NPQNQAIIKTIIHMAHNMKIAVIAEGVETH 771 Query: 1069 LVMDTLSGIGVDLIYGEVIADAQP---LDLLVNSSYFA 1103 +D L + + G + P +D + + + Sbjct: 772 EHVDFLKEQLCNEVQGYFYSKPLPTKEIDSFLQVNRYG 809 >UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJ77_9PROT Length = 1399 Score = 893 bits (2309), Expect = 0.0, Method: Composition-based stats. Identities = 160/898 (17%), Positives = 317/898 (35%), Gaps = 86/898 (9%) Query: 273 FLLILLPANIMTMVMYAFRAERKHI-SESETH-------------------FRNAMEYS- 311 + A M + + + SE R + + Sbjct: 510 AAGRAVLAVGTAMNITDRKRAEAALLRRSEQLVQLSAASQEINSELDIPVILRQLIAAAL 569 Query: 312 ----------------AIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPED 355 + A GQ L + G ++ +F E Sbjct: 570 KVTGAGGGAAARIAGGQMVFAEYNRGGQLLPVDYRFSPGYGVPGRVMQTRSFHLSNDAEH 629 Query: 356 LNKDLQQVEKLISGEINTYSMEKRYYNRNGDVV-WALLAVSLVRHTDGTPLYFIAQIED- 413 + ++ + I + ++ +R+G+++ + DG Sbjct: 630 DPWVIPEIRQAIGFDCL---LDMPIISRHGELLGCFEIHNKPGGFGDGDVRLLHGLAASA 686 Query: 414 ---------INELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI 464 + E ++ EQ ++ + GI + + I ++ ++ Sbjct: 687 AVALENSALLAERRQVEQALRESEALKASVLASAACGIVATDPQGLITVFNPGAEAIFGY 746 Query: 465 PPHIKPNW---QVWYECVLPEDR-------------QHAEKVIRDSLQSRSPFKLEFRIT 508 H +W++ + ++ + S + E Sbjct: 747 AAHEVVGKVTPTLWHDAEEIAAAAVALSRDLGCRVEAGFDALVARARCSGQVDERETAGV 806 Query: 509 VKDGIRH-IRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEA 567 KDG R IR + + +G + LG +D+T KQ L + + GE Sbjct: 807 RKDGRRITIRLAVTVMRDAQGALAGYLGTIVDITAQKQAAAQLNLAAK----VFEQGGEG 862 Query: 568 VVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSA 627 + D A I +N +++G+++ E LG + + + ++++ + S Sbjct: 863 IAITDAACNIVMINQAFTRITGYSEVEVLGRNPSLL--ASGRHDQAFYQSMWESIESLGH 920 Query: 628 IEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDAL 687 + ++ + G Y I+ + DG+ + D+T+ ++ + A DAL Sbjct: 921 WQGEIWNRRKDGSVYPEWLLISRV-DGDGAPTHYIGTFIDITQHKEAEASIQRLAHFDAL 979 Query: 688 THLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLM 747 T L NR+ E+++R L + + AL+F+DLDRFK VNDS GH GDALL ++A + Sbjct: 980 TGLPNRSLLEERVRHDLARAHRGREALALMFVDLDRFKNVNDSLGHRVGDALLIQVAERL 1039 Query: 748 LSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAG 807 +R D ++RLGGDEF ++LP + + A +A +++ + + E SAG Sbjct: 1040 RRAVRDEDTVSRLGGDEFIVVLPSTDADGAAHVAAKLLEVMA-PAYRIEQHELTCSLSAG 1098 Query: 808 ITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIK 867 I + + + AD A Y +K GR + + + + D + R ++ Sbjct: 1099 IAMYPADGESFEALSMSADTAMYRAKQSGRNAYCFFTAEMQERSARNLQIENDLR-RALE 1157 Query: 868 ENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRV 926 +L + + + R + +L W + ++ F + L + V Sbjct: 1158 NGELRLHYQPQ--FTLADRRLVGAEALLRWQHPQLGMVSPVEFIPIAEECGLILPIGEWV 1215 Query: 927 FHEFFQQAAKAV--ASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAE 984 Q +++++ LS A+L + + L+ L + L L + Sbjct: 1216 LRAAVSQLRVWQQEGLPPMTVAVNLSAVQFRQASLTDVVSRILDAEGLAAQFLELELTES 1275 Query: 985 AILDHA----ESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNL 1040 +D+ ++ KLR G R+ + G + LK L +D A++ + Sbjct: 1276 VAMDNPLAAIATMDKLRALGVRMSIDDFGTGYSSMSYLKRFRVHKLKIDRSFVADLAADP 1335 Query: 1041 MDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 DE ++T A+ LG++TIA V + L G D G + + Sbjct: 1336 EDEAIVTATISLARDLGLQTIAEGVESEAQLAFLRAKGCDEAQGYLFSRPLAPAQFAA 1393 Score = 186 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 85/601 (14%), Positives = 163/601 (27%), Gaps = 76/601 (12%) Query: 144 VLLTPGDDPLRAFLIWVLSESIGALALVPLGLLFKPHYLLRHRNPRLLFESLLTLAITLT 203 + P L ++ A +LV LL L R R AI Sbjct: 247 WMGIPFVLSPHT---RYLGYALLAGSLVGALLLIWVVTLRRLVRQRTATLEATLDAIPDP 303 Query: 204 LSWLSM------LYLPWPFTFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLL 257 L L + + P L + T + + A S Sbjct: 304 LFELGLDGRYHDCHTPRADLLAAPPDALIGRLLTDVLPAAAAATCLSALREAQATGHSAG 363 Query: 258 ATPRTYLMSHMPWLPFLLILLPANIMTM-VMYAFRAERKHISESETHFRNAMEYSAIGMA 316 L W + P + + +E R A E + + Sbjct: 364 QQFELPLRGGNFWFELSVARKPTGVGREPRFVVLARDISERKRAEARLRMATEATQLVFW 423 Query: 317 LVGTEGQWLQTNKALCQFLGYSQEELRGLT--FQQLTWPEDLNKDLQQVEKLISGEINTY 374 + L+ + ++ Q LG E G T +L P+ + ++ + Sbjct: 424 ELDLLSDQLRYDTSMLQVLGLDHGEDPGSTGALMELVHPDHRAALTESFRAAMASAEPVF 483 Query: 375 SMEKRYYNRNGDVVWALLAVSLV-RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITL 433 S E + +G+ VW + R G + + +I + KR E + E++ Sbjct: 484 SFEHQIVTHSGEGVWLQTRGRVAQRDAAGRAVLAVGTAMNITDRKRAEAALLRRSEQLVQ 543 Query: 434 ANEAGGIG-------------------------------------IWEWELKPNIFSWDK 456 + A E+ + D Sbjct: 544 LSAASQEINSELDIPVILRQLIAAALKVTGAGGGAAARIAGGQMVFAEYNRGGQLLPVDY 603 Query: 457 RMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHI 516 R Y +P + ++ E IR ++ + + + Sbjct: 604 RFSPGYGVPGRVMQTRS-FHLSNDAEHDPWVIPEIRQAIGFDCLLDMPIISRHGELLGCF 662 Query: 517 RALANRVLNKEGEVERLLGINMD----------MTEVKQLNEALFQEKERLHITLDSIGE 566 +G+V L G+ + E +Q+ +AL + + L S Sbjct: 663 EIHNKPGGFGDGDVRLLHGLAASAAVALENSALLAERRQVEQALRESEALKASVLASAAC 722 Query: 567 AVVCIDMAMKITFMNPVAEKMSGWTQEEALGV-PLLT-------------VLHITFGDNG 612 +V D IT NP AE + G+ E +G + Sbjct: 723 GIVATDPQGLITVFNPGAEAIFGYAAHEVVGKVTPTLWHDAEEIAAAAVALSRDLGCRVE 782 Query: 613 PLMENIYSADTSRSAI-EQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTES 671 + + + + E++ + G + ++T + G+ G + I D+T Sbjct: 783 AGFDALVARARCSGQVDERETAGVRKDGRRITIRLAVTVMRDAQGALAGYLGTIVDITAQ 842 Query: 672 R 672 + Sbjct: 843 K 843 Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats. Identities = 64/346 (18%), Positives = 116/346 (33%), Gaps = 23/346 (6%) Query: 226 SAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTM 285 + + L + I + P +L+ YL + L+ A ++ Sbjct: 223 ATLALLQRGFAAISSDEEQALRRKWMGIPFVLSPHTRYL----GYALLAGSLVGALLLIW 278 Query: 286 VMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGL 345 V+ R R+ ++ + +G +G++ + L + L G Sbjct: 279 VVTLRRLVRQRT----ATLEATLDAIPDPLFELGLDGRYHDCHTPRADLLAAPPDALIGR 334 Query: 346 TFQQLTWPEDLNKDLQQVEKLIS-GEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTP 404 + L + + + G E G W L+V+ G Sbjct: 335 LLTDVLPAAAAATCLSALREAQATGHSAGQQFELPLR---GGNFWFELSVARKPTGVGRE 391 Query: 405 LYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI 464 F+ DI+E KR E R+ +A EA + WE +L + +D M ++ + Sbjct: 392 PRFVVLARDISERKRAEA-------RLRMATEATQLVFWELDLLSDQLRYDTSMLQVLGL 444 Query: 465 PPHIKPNWQ-VWYECVLPEDRQHAEKVIRDSLQSRSP-FKLEFRITVKDGIRHIRALANR 522 P E V P+ R + R ++ S P F E +I G R Sbjct: 445 DHGEDPGSTGALMELVHPDHRAALTESFRAAMASAEPVFSFEHQIVTHSGEGVWLQTRGR 504 Query: 523 V--LNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGE 566 V + G +G M++T+ K+ AL + E+L + E Sbjct: 505 VAQRDAAGRAVLAVGTAMNITDRKRAEAALLRRSEQLVQLSAASQE 550 Score = 98.2 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 34/281 (12%), Positives = 83/281 (29%), Gaps = 14/281 (4%) Query: 402 GTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFEL 461 G+ + + I + + + +Q + +A ++E L +L Sbjct: 268 GSLVGALLLIWVVTLRR----LVRQRTATLEATLDAIPDPLFELGLDGRYHDCHTPRADL 323 Query: 462 YEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALAN 521 PP ++ + + +R++ + +F + ++ G Sbjct: 324 LAAPPDALIG-RLLTDVLPAAAAATCLSALREAQATGHSAGQQFELPLRGGNFWFELSVA 382 Query: 522 RVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMN 581 R G R + + D++E K+ L E + +D+ + Sbjct: 383 RKPTGVGREPRFVVLARDISERKRAEARLRMATEATQLVF-------WELDLLSDQLRYD 435 Query: 582 PVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTS-RSAIEQDVVLHCRSGG 640 ++ G E G + + L E+ +A S + + SG Sbjct: 436 TSMLQVLGLDHGEDPGSTGALMELVHPDHRAALTESFRAAMASAEPVFSFEHQIVTHSGE 495 Query: 641 SYDVHYSIT-PLSTLDGSNIGSVLVIQDVTESRKMLRQLSY 680 + G + +V ++T+ ++ L Sbjct: 496 GVWLQTRGRVAQRDAAGRAVLAVGTAMNITDRKRAEAALLR 536 >UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Proteobacteria RepID=Q0AIX2_NITEC Length = 791 Score = 893 bits (2308), Expect = 0.0, Method: Composition-based stats. Identities = 163/784 (20%), Positives = 301/784 (38%), Gaps = 55/784 (7%) Query: 362 QVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTE 421 + ++ E + R+Y+R+G +VW L + L+R P + DI+E KRTE Sbjct: 2 ARQSILISEGQLVH-DYRFYHRDGRIVWLLDQLQLIRDAGDRPYEVVGTCLDISERKRTE 60 Query: 422 QVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLP 481 + Q + L + + ++ ++ + + M + ++ LP Sbjct: 61 LIRQAQQSALDLIVTNQSLPVILSDIAKHLEAINPDMLVSILLLDKQTKRLKLGAAPSLP 120 Query: 482 EDRQHAEKVIRDSLQSRS----PFKLEFRITVK-DGIRHIR-------------ALANRV 523 +D A S F+ E I D H + + Sbjct: 121 DDYNAAVNGQEIGEGVGSCGTAAFRGETVIVSDIDHHPHWQHFLDLTRKADLHACWSLPF 180 Query: 524 LNKEGEVERLLGINMDM------------------TEVKQLNEALFQEKERLHITLDSIG 565 ++ +V + I + T + + SI Sbjct: 181 KDEHNDVLGIFAIYHHIACEPSPKDLELIREFASFTALAVQKVRATEALRLSATVFASIR 240 Query: 566 EAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSR 625 E VV D+ +I +N +++G+++E+ LG + + + + +++ + Sbjct: 241 EGVVITDLEPRIVAVNRAYMRITGYSEEQVLGKNPKIIK--SGLHDKTFYQAMWATLKAT 298 Query: 626 SAIEQDVVLHCRSGGSYDVHYSITPLSTL-----DGSNIGSVLVIQDVTESRKMLRQLSY 680 +V ++G Y +I + + ++ V V D+++ ++ QL+ Sbjct: 299 GHWSGEVWNRRKNGEIYPQWLTINAVCIDSSCCDESNSCNYVGVFTDISQIKQSEAQLAQ 358 Query: 681 SASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALL 740 A +D LT L NR + QL ++ + +++IDLDRFK VNDS GH GD LL Sbjct: 359 LAHYDPLTGLPNRLLAQSQLHQAIERAQRHGRLVGVLYIDLDRFKNVNDSLGHPVGDELL 418 Query: 741 RELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRV 799 +LA M +R D LARLGGDEF L+L D ++ F+A +I+ + + G Sbjct: 419 IKLAERMKKRVREEDTLARLGGDEFLLVLEDVRDLGDPAFVAQSLINLLTSPFVLPSGHE 478 Query: 800 HRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSL 859 + AS GI+L ++ A E++ +D+A Y +K GR + + A +ER M Sbjct: 479 IFINASIGISLFPEDASNATELIQHSDMAMYQAKKEGRNTYRYHTEALSVAANERLIMEN 538 Query: 860 DEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGE-IIDEQTFRRSFSDPAL 918 ++ + +L++ + R + + +L W G+ ++ F + L Sbjct: 539 RLRY-ALSAEELILHYQPLVDAR--TGYVVGVEALVRWQPPGKAMVPPGKFIPIAEETGL 595 Query: 919 SHALDRRVFHEFFQQAAKA--VASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRL 976 L V +QA + +++ LSV S LV + LE + LP Sbjct: 596 IVPLGEWVLRTACKQARAWIDAGLSPLVMAVNLSVRQFQSENLVGMVQRILEETQLPADY 655 Query: 977 LHLIIPAEAILDHA----ESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGEL 1032 L L + ++H E++ KL+ G + + G LK D L +D Sbjct: 656 LELELTESMFMEHVEQSIETLNKLKTLGVHLAIDDFGTGYSSLIYLKRFPIDKLKIDQRF 715 Query: 1033 CANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQP 1092 ++ + D + I A+ L + +A + + L D G + P Sbjct: 716 VRDLADDHNDREIAATIIAMARGLKLGVLAEGIESEEQLAFLRQQDCDYYQGYLFHRPVP 775 Query: 1093 LDLL 1096 L Sbjct: 776 AIEL 779 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 30/239 (12%), Positives = 76/239 (31%), Gaps = 9/239 (3%) Query: 288 YAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTF 347 A ++ +E+ G+ + E + + N+A + GYS+E++ G Sbjct: 216 TALAVQKVRATEALRLSATVFASIREGVVITDLEPRIVAVNRAYMRITGYSEEQVLGKNP 275 Query: 348 QQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRH-----TDG 402 + + Q + + +S E +NG++ L ++ V + Sbjct: 276 KIIKSGLHDKTFYQAMWATLKA-TGHWSGEVWNRRKNGEIYPQWLTINAVCIDSSCCDES 334 Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELY 462 ++ DI+++K++E QL L + +R L Sbjct: 335 NSCNYVGVFTDISQIKQSEAQLAQLAHYDPLTGLPNR--LLAQSQLHQAIERAQRHGRLV 392 Query: 463 EIPPHIKPNWQVWYECV-LPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA 520 + ++ + + P + K+ + R+ + + + + Sbjct: 393 GVLYIDLDRFKNVNDSLGHPVGDELLIKLAERMKKRVREEDTLARLGGDEFLLVLEDVR 451 >UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STH5_PSYIN Length = 962 Score = 892 bits (2307), Expect = 0.0, Method: Composition-based stats. Identities = 149/691 (21%), Positives = 277/691 (40%), Gaps = 20/691 (2%) Query: 421 EQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVL 480 + ++ G+G + K I++ + + EL+ I + + W V Sbjct: 263 RAELIKQTYKLKRYQRIAGLGSYLLNFKTGIWTSSEILDELFGIDQSYNHSTEGWTLIVH 322 Query: 481 PEDRQHAEKVI-RDSLQSRSPFKLEFRITV--KDGIRHIRALANRVLNKEGEVERLLGIN 537 P+DR + + + L PF E+RI IR + L + +G +++G Sbjct: 323 PDDRIKMDDYLKNEVLAKGKPFDKEYRIVRQTDQSIRWLHGLGKLEFDNDGLPVKMVGTV 382 Query: 538 MDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALG 597 D+TE K+ +++L +L + ++ ++V D+ KI ++N + K++G++++E LG Sbjct: 383 QDITEQKRASDSLL----KLSLAVEQSPNSIVITDLDGKIEYVNNMFIKVTGYSRDEVLG 438 Query: 598 VPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGS 657 + + + +++ T +++ + Y +ITP+ DG Sbjct: 439 QNPRILK--SGKTPQTTFKEMWAHLTRGDIWHGEIINRRKDKSIYIESATITPVKQADGK 496 Query: 658 NIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALV 717 V + +D+TE +K A D LT L NR + Q++ L S HQ ++ Sbjct: 497 ITNYVAIKEDITEKKKAEAYTENLAYFDQLTGLPNRRMLQAQVKYRLNMAQSNHQPLTVM 556 Query: 718 FIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESA 777 F+DLD FK +NDS GH GD +L ++A + +R D ++RLGGDEF +L P+ + +A Sbjct: 557 FLDLDNFKNINDSLGHTVGDQVLIKIAKRIKKAIREVDTVSRLGGDEFIMLFPNTDANAA 616 Query: 778 RFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGR 837 IAT +I ++ E + S GI + ++ + ++ A+ A Y KN R Sbjct: 617 MHIATTLIQEISKASV-VEHNELTITPSIGIAIYPNDGNDFKTLLKNAETAMYRVKNDSR 675 Query: 838 GRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW 897 P+ + S + + +K N+L + S + + +L W Sbjct: 676 NGFHFVTPEMQLSASRNLQLENALR-HALKRNELQLYYQPQIS--TSNGQIIGAEALLRW 732 Query: 898 -SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK--GISISLPLSVAGL 954 E +I F + V +Q + + I++ LSV Sbjct: 733 HHPELGMISPAEFIPIAESSGQIIEIGEWVLRTAIRQTKNWMDDGFTPMIIAVNLSVVQF 792 Query: 955 SSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGR 1010 L+ + + L LP L L + + ES + G R+ + G Sbjct: 793 RQKNLLTLITDILAEVQLPNEYLELELTEAVTMHDPESVINVMNTFHEQGIRMSIDDFGT 852 Query: 1011 DLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLV 1070 + LK L +D ++ + D +++ I A LG++TIA V Sbjct: 853 GYSSLSYLKKFKVYKLKIDQSFIRDISNDPDDRAIVSAIIDMASNLGLQTIAEGVETAEQ 912 Query: 1071 MDTLSGIGVDLIYGEVIADAQPLDLLVNSSY 1101 + L G + G + P + Sbjct: 913 LAFLRLHGCHEVQGYYFSKPLPSVEFEQFRH 943 Score = 133 bits (335), Expect = 5e-29, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 1/154 (0%) Query: 289 AFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQ 348 E+K S+S A+E S + + +G+ N + GYS++E+ G + Sbjct: 383 QDITEQKRASDSLLKLSLAVEQSPNSIVITDLDGKIEYVNNMFIKVTGYSRDEVLGQNPR 442 Query: 349 QLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFI 408 L + +++ ++ + + E ++ + ++ V+ DG ++ Sbjct: 443 ILKSGKTPQTTFKEMWAHLT-RGDIWHGEIINRRKDKSIYIESATITPVKQADGKITNYV 501 Query: 409 AQIEDINELKRTEQVNQQLMERITLANEAGGIGI 442 A EDI E K+ E + L L + Sbjct: 502 AIKEDITEKKKAEAYTENLAYFDQLTGLPNRRML 535 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 66/505 (13%), Positives = 154/505 (30%), Gaps = 38/505 (7%) Query: 73 SLGNIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQNLADWLRLALGSA 132 + SI ++ L+ I + A+ +L + N L + + Sbjct: 20 LSYPLLRSIEWHGSTHLHTFMEIIATLLALF-VGILSFIHYHTNKSNQLFLLIAVGFFGT 78 Query: 133 IVP----PLLGGVLVVLLTPGDDPLRAFLIWVLSESIGALALVPLGLLFKPHYLLRHRNP 188 ++ + P W+ S ++ L + F+ + Sbjct: 79 AFLDGYHAIVTSLFFAEYFPSIPSSLIPWSWIASRLFLSIFLFWSYIHFRYMHSTTINER 138 Query: 189 RLLFESLLTLAITLTLSWLSML---------------YLPWPFTFIIVLLMWSA--VRLP 231 L + L+ T L ++P F + + + Sbjct: 139 HLYTFASLSTLTTFLFFAFVPLSNAYNTEFIFHRMAEWVPGLFFSLALCGYLVKGNWKKD 198 Query: 232 RMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANI--MTMVMYA 289 E +L V ++S ++ S + + +H+ +++L + + ++ Sbjct: 199 IFEYWLTLSLIVSVISQIVFMSSSEVLFDIEFDAAHLLKKISYILVLIGLLKSIYKLVLY 258 Query: 290 FRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLG----YSQEELRGL 345 +R + + + + +G L+ + +++ L + G Y+ Sbjct: 259 GVIQRAELIKQTYKLKRYQRIAGLGSYLLNFKTGIWTSSEILDELFGIDQSYNHST---E 315 Query: 346 TFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNR-NGDVVWALLAVSLVRHTDGTP 404 + + P+D K ++ + + + E R + + + W L DG P Sbjct: 316 GWTLIVHPDDRIKMDDYLKNEVLAKGKPFDKEYRIVRQTDQSIRWLHGLGKLEFDNDGLP 375 Query: 405 LYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI 464 + + ++DI E KR + ++LA E I +L I + ++ Sbjct: 376 VKMVGTVQDITEQKRASDSLLK----LSLAVEQSPNSIVITDLDGKIEYVNNMFIKVTGY 431 Query: 465 PPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRA-LANRV 523 + K + L + E KD +I + V Sbjct: 432 SRDEVLGQNPRILKSGKTPQTTF-KEMWAHLTRGDIWHGEIINRRKDKSIYIESATITPV 490 Query: 524 LNKEGEVERLLGINMDMTEVKQLNE 548 +G++ + I D+TE K+ Sbjct: 491 KQADGKITNYVAIKEDITEKKKAEA 515 >UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RPL3_RHORT Length = 855 Score = 891 bits (2303), Expect = 0.0, Method: Composition-based stats. Identities = 169/812 (20%), Positives = 306/812 (37%), Gaps = 29/812 (3%) Query: 300 SETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKD 359 S F++ +E +G AL+ +G + N L +G + + L G P D Sbjct: 37 SAALFQSVVEALPVGTALL-RDGVIVHANATLAGQIGETIDTLIGSPLTSYLTPADALAV 95 Query: 360 LQQVEKLISGEIN-TYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELK 418 + VE I+ + +G L S + +G + D+ Sbjct: 96 QKVVEGAIALHGGVPVRRIAHIRHISGSERVYSLRFSPL--DNGPHPLLVVITRDMTAQV 153 Query: 419 RTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI--PPHIKPNWQVWY 476 E + + E GI++ + + +Y P + ++ Sbjct: 154 AAENALRAAEGKYRAIFENAVEGIYQSTPDGTYLDVNPALARIYGYASPAELIAHFTDIA 213 Query: 477 ECVLPED--RQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLL 534 + + R ++++R++ + R F E I A V + EV Sbjct: 214 SQLYVDGTKRGEFQRLMRETGEVRD-FTAEVW-RCDGHTIWITENARCVRGPDNEVLYYE 271 Query: 535 GINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEE 594 G D+T +Q E + L SI E +V ++ + + +NP E M+G +++ Sbjct: 272 GTVEDITAQRQSQETM----RLLGKVFTSIAEGIVLLERDLTVRTVNPAFEAMTGLLRQD 327 Query: 595 ALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTL 654 G P + + + + ++ R G Y ++T + T Sbjct: 328 MEGRPARLF--ASGLHENDFLATVAAEVDRAGLWRGEIWGERREGPPYSGEMTVTAVRTR 385 Query: 655 DGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRH 714 G V I D+T+ ++ + + A+ D LTHL NR +L + T ++ Sbjct: 386 AGETTHYVAAITDITKRKRDEEHIRFQANFDMLTHLPNRHLIMDRLEQAMHQAQRTGRQV 445 Query: 715 ALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNV 774 ++F+DLDRFK +NDS GH+AGD +L+ A + + +R SD + RLGGDEF ++L + Sbjct: 446 CVMFLDLDRFKQINDSYGHSAGDEVLKLTARRLRNCVRISDSVGRLGGDEFIVILSNVED 505 Query: 775 ESARF-IATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASK 833 + A IA +I+ ++++ F G S GIT D+ A +++ AD+A Y +K Sbjct: 506 QHAGAYIAEKILYSLSE-PFPIGGTEVFCIPSVGITYFPDHGETAPDLLRNADVAMYHAK 564 Query: 834 NGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLIS 893 GG R ++ P A M D + + ++ + + + + Sbjct: 565 QGGERRYAIFTPDMARRSLALLTMESDLR-HALARDEFELHFQPKVRADL---TLIGAEA 620 Query: 894 LKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKG--ISISLPLS 950 L W E +I+ F + L + R E + A S+S+ +S Sbjct: 621 LIRWRHPEKGLINPGDFIPLAEESGLILPIGRWTLREACDRVMSWRAEGLTIPSVSVNVS 680 Query: 951 VAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLS 1006 TLV + + L + L P L L I + E +++ L+ G + + Sbjct: 681 PRQFQDQTLVETVRQILVETGLEPEALDLEITETVMTGDVEHAVGTLRALKDLGVTLSID 740 Query: 1007 QVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVV 1066 G N LK D L +D +V + D +++ I A+ LG +A V Sbjct: 741 DFGTGYSSLNYLKTFPIDTLKIDQTFVRDVLHSGKDAAIVSTIIALARNLGFSVVAEGVE 800 Query: 1067 LPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 + L G + + P Sbjct: 801 EIEQAEFLGSRDCQNFQGFLYSRPLPPAEFTT 832 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 53/356 (14%), Positives = 114/356 (32%), Gaps = 45/356 (12%) Query: 279 PANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGY- 337 ++T M A A + +E +R E + G+ +G +L N AL + GY Sbjct: 141 LLVVITRDMTAQVAAENALRAAEGKYRAIFENAVEGIYQSTPDGTYLDVNPALARIYGYA 200 Query: 338 SQEELRGLTFQQL-----TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALL 392 S EL F + + + + + +GE+ ++ E +G +W Sbjct: 201 SPAELIA-HFTDIASQLYVDGTKRGEFQRLMRE--TGEVRDFTAEVW--RCDGHTIWITE 255 Query: 393 AVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIF 452 VR D LY+ +EDI +++++ + + + GI E + Sbjct: 256 NARCVRGPDNEVLYYEGTVEDITAQRQSQETMR----LLGKVFTSIAEGIVLLERDLTVR 311 Query: 453 SWDKRMFELYEIPPHIKPNW--QVWYECVLPED-RQHAEKVIRDSLQSRSPFKLEFRITV 509 + + + + +++ + D + + R E Sbjct: 312 TVNPAFEAMTGLLRQDMEGRPARLFASGLHENDFLATVAAEVDRAGLWRGEIWGE---RR 368 Query: 510 KDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEAL---------------FQEK 554 + V + GE + D+T+ K+ E + Sbjct: 369 EGPPYSGEMTVTAVRTRAGETTHYVAAITDITKRKRDEEHIRFQANFDMLTHLPNRHLIM 428 Query: 555 ERLHITLDSI-----GEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLH 605 +RL + V+ +D+ + +N +G +E L + + + Sbjct: 429 DRLEQAMHQAQRTGRQVCVMFLDLD-RFKQINDSYGHSAG---DEVLKLTARRLRN 480 >UniRef50_Q0KDS7 Predicted signal transduction protein containinga membrane domain, an EAL and a GGDEF domain n=4 Tax=Cupriavidus RepID=Q0KDS7_RALEH Length = 1132 Score = 890 bits (2301), Expect = 0.0, Method: Composition-based stats. Identities = 367/1109 (33%), Positives = 555/1109 (50%), Gaps = 36/1109 (3%) Query: 16 LLHLVSLGLVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRHAGRMWPGIALSCSLG 75 L L+ G F+ +L L++ +A +W P + + P + Sbjct: 23 WLPLLLAGAGYFVLAAAALWLARLPGTVAAVWLPNAFGLGLLLHRPRAEGPWLLAGMLGA 82 Query: 76 NIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQNLADWLRLALGSAIVP 135 ++ A+ + + + T N+ E + L +LL + L A+ A+ Sbjct: 83 SVLANHAAGDSVATALMLTGANLAEMLFALG-LLRLLDRHAVLGRHGPLAAFAVMLAVGG 141 Query: 136 PLLGGVLVVLLTP------GDDPLRAFLIWVLSESIGALALVPLGLLFKPHYLLRHRNPR 189 L + G + W ++++G L+P+ L + Sbjct: 142 ILAPALGATAGAMAIAATHGTSFASVWWTWWQADALGMALLLPMMLSMTEVRVRAAVARP 201 Query: 190 LLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVR-LPRMEAFLIFLTTVMMVSL 248 +L LA+ L + + PF + + L+ A+ P A L + T+ + +L Sbjct: 202 VLAPQAGALALCLAIGAFAQWQSHDPFAAMSLPLVLVALAGNPFATALLTLVATLCLQAL 261 Query: 249 MMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAM 308 M+ + +P ++++ P I + R R + S+ FR AM Sbjct: 262 MLL----------AHRHEAVPLSAAVIMVFPVCI-AYLTEQNRHGRASLRSSDKRFRQAM 310 Query: 309 EYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLIS 368 E+SAIGMALVG +G+ N+A+ + LGYS EL L++QQLT P+DL DL+QV+ L+S Sbjct: 311 EHSAIGMALVGMDGRCQTVNRAMTELLGYSAAELHELSYQQLTHPDDLTGDLRQVDNLLS 370 Query: 369 GEINTYSMEKRYYNRNGDVVWALLAVSLVRHTD-GTPLYFIAQIEDINELKRTEQVNQQL 427 G+I +Y +EKRY +++G W LLAVSLVR G P +FI Q+EDI+ K +Q ++L Sbjct: 371 GKIESYRLEKRYRHKDGHYRWVLLAVSLVRDEQTGEPQHFITQVEDIHARKLAQQELERL 430 Query: 428 MERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI-PPHIKPNWQVWYECVLPEDRQH 486 RI LA EAGG+GIWEW+ +WD RM L+ P P + W + P+D Sbjct: 431 SRRIQLAAEAGGVGIWEWDFTSAGVTWDARMHALHGTDPAGGTPVVEQWIAMLHPDDVSR 490 Query: 487 AEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLNKEGEVERLLGINMDMTEVKQ 545 +R +++ +PF E+RI G +RH+RA+A +G + L+G N D+TE ++ Sbjct: 491 VSGEMRQAIRGEAPFDTEYRIARPGGDVRHVRAMAMVTRTDDGTAQALVGTNWDITEQRR 550 Query: 546 LNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLH 605 L EALF+EKERLHITL SIG+AV+C D AM +TFMNP+AE+++GWT A G+PL V Sbjct: 551 LTEALFEEKERLHITLRSIGDAVICTDAAMHVTFMNPIAEQLTGWTMASATGLPLEQVFR 610 Query: 606 ITFGDNGPLMENIYSADTSR---SAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSV 662 I G + + A + ++ VL +G +DV S P+ T G +G+V Sbjct: 611 IVDEATGDPIPSPVEACLRTLAPAYLQDGAVLQSLTGERHDVQDSAAPVLTARGEVLGAV 670 Query: 663 LVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLD 722 LV QD+T +R + R+L+ SA HDALT L NR FEK+LR R AL FIDLD Sbjct: 671 LVFQDITTARALQRELARSAMHDALTGLPNRTWFEKRLREACDAARLHGHRAALCFIDLD 730 Query: 723 RFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIAT 782 RFK VND+AGH AGD LLREL ++ + +R DVLARLGGDEF LLL DC V+ A + Sbjct: 731 RFKIVNDTAGHGAGDVLLRELGYMIRNHVRPDDVLARLGGDEFALLLKDCTVDQAEQVCQ 790 Query: 783 RIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTV 842 +I A+ F WEGRV+ +GAS GI ID + +E+MS+AD+ACYA+K GR RV+V Sbjct: 791 GVIDAIRGRRFPWEGRVYDMGASIGIAAIDLDVPPVSELMSRADVACYAAKAAGRSRVSV 850 Query: 843 YEPQQAAAHSERAAMSLDE-QWRMIKENQLMMLAHGVASPRIPEARN----LWLISLKLW 897 Y ++ A + + ++ N+ + A + + + E + + L Sbjct: 851 YRRDESDARRHHRELEVAAGIHSALEANRFRLFAQEIRALQPEENEDGAEHCHIEILVRM 910 Query: 898 SCEGE-IIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS-KGISISLPLSVAGLS 955 E +I F + L +DR V + + + + G+S+S+ LS L Sbjct: 911 VDEHGDLIMPGAFIPAAERYDLMGHVDRWVIRNVLRGYGERLGAVPGLSVSINLSANSLG 970 Query: 956 SATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQKL----RLAGCRIVLSQVGRD 1011 L+ L +LE S LP + L I A++++ + +L R AGC + L G Sbjct: 971 EPFLLPFLHAELEASALPASRIRLEITETALINNMAAANRLVTEMRRAGCTVSLDDFGSG 1030 Query: 1012 LQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVM 1071 L F LK D+L +DG + N +D +++ I RLG++T+A V + Sbjct: 1031 LSSFAYLKQFPVDFLKIDGSFIRQLADNAVDREIVSSINDIGHRLGVRTVAEWVEDERTL 1090 Query: 1072 DTLSGIGVDLIYGEVIADAQPLDLLVNSS 1100 D L IGVD G VI LD+ + Sbjct: 1091 DALRAIGVDYAQGYVIGRPVALDVFLAGC 1119 >UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVK9_METML Length = 1329 Score = 890 bits (2300), Expect = 0.0, Method: Composition-based stats. Identities = 135/716 (18%), Positives = 276/716 (38%), Gaps = 23/716 (3%) Query: 394 VSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFS 453 ++L++ + + + + ++ +RI I+ + Sbjct: 619 IALLQEMASDISFALDNFDREQKKQKLMSELDYANKRINQIVNLSPAVIYTLKPNAEGIF 678 Query: 454 ----WDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITV 509 + ++++ W + + ED A + ++ S ++R Sbjct: 679 HSDFISENIYQITGYAKDEWLKDNFWLDHIHTEDLAAALDSKKILFETGS-LNHQYRFMH 737 Query: 510 K-DGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAV 568 G I + G+ ++G +D+T+ E L +S + + Sbjct: 738 ANGGYIWIEDQLTLTRDNNGKPLEIVGAWLDITDRLSAEEKL----RLNAKVFESSRDGI 793 Query: 569 VCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAI 628 V D KI +N ++G+ +E +G + ++ ++ + Sbjct: 794 VITDKNNKIISVNNAFTTITGYEAKEVVGKNPHMLASEKLEES--FYSAMWDSIGVMGYW 851 Query: 629 EQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALT 688 + +V+ ++G Y SI+ + DG + +I D++E + ++ + ++ D LT Sbjct: 852 QGEVINQRKNGEIYTQWLSISTIKDADGKISQHIGIISDISERKVAEERIQFLSNFDPLT 911 Query: 689 HLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLML 748 +L N+ + ++ L T L+F+DLDRFK +N+S G + GD +++ELA + Sbjct: 912 NLPNKNLLNDRTKLALATAKRLKTAVTLMFVDLDRFKFINESLGPSIGDQVVKELAERFV 971 Query: 749 SMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGI 808 + +R D + R GGDEF LLLP+ + E A +A +++ V F + G+ + AS GI Sbjct: 972 AYMRPEDTVCRQGGDEFILLLPNTDAEGAAHVAKKLLDIVAQ-PFNFHGQKIVLTASIGI 1030 Query: 809 TLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKE 868 + + ++ AD A Y +K GR + Q + + + + I+ Sbjct: 1031 SAYPQDGESFEQLAQSADAALYRAKYEGRNNFQFFARQMHEQAHDILLLESELR-SAIEH 1089 Query: 869 NQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVF 927 + ++ + + + L +L W E ++ F + L + V Sbjct: 1090 EEFLLYYQPQYDSKTS--KIIGLEALIRWQHPEKGLVSPAVFIPIAEESGLIAEIGDWVL 1147 Query: 928 HEFFQQAAKAV--ASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEA 985 +Q A + +++ LSV TL + + L ++ + P +L L + Sbjct: 1148 RTAVKQLASWQEAGLGAVPVAVNLSVVQFHQDTLYGSVCQILRDTKVDPSMLELELTEGI 1207 Query: 986 ILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLM 1041 ++ +E + +L G R+ + G + LK D L +D + + Sbjct: 1208 AMEDSERTLNVLNQLNSLGVRLSIDDFGTGYSSLSYLKKFKIDKLKIDQSFVRGIGSHPQ 1267 Query: 1042 DEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 D +IT I A+ L KTIA V ++ L D I G + P + Sbjct: 1268 DAAIITAIISMAKSLSFKTIAEGVETLEQLNFLIANSCDEIQGYYFSKPLPSTEVT 1323 Score = 152 bits (384), Expect = 9e-35, Method: Composition-based stats. Identities = 63/518 (12%), Positives = 165/518 (31%), Gaps = 84/518 (16%) Query: 231 PRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAF 290 I + + T ++ + + L+ I++ + F Sbjct: 284 HERALTQIISRVIEVGGTKWTLFFQTTPAFETRILPYGKPMLVALLGSTLTILSAFLAWF 343 Query: 291 RAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQL 350 + ++ES ++ + ++ G+ ++ + Q++ N A LGY Q EL G+ + Sbjct: 344 LLSSRQLAES--RYQKLFDQASDGVLVLDHQHQFIAANLAATNMLGYQQGELLGMRLPDV 401 Query: 351 T------WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTP 404 PE + +I T E +Y ++G A + + Sbjct: 402 LINNVTKHPE--------FNTNLISDIPT-KDEWQYRRKDGSRFIAEVNCRKLDKN---- 448 Query: 405 LYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKP-----NIFSWDKRMF 459 Y+ I D+ E K E L + +E + + S + Sbjct: 449 -YYFTIIRDLTERKLAENRILHLTQLYQALSEVNQAIVRMGDDHELFPVVCRSSVNFGGM 507 Query: 460 ELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRD--------------SLQSRSPFKLEF 505 ++ + + + Q++ V + ++ + ++ +L++ + Sbjct: 508 KMAWVGQLDEESQQIFPVAVHGDGIEYIDGLVISANADIPEGQGPTSTALRNNRMMIIND 567 Query: 506 RITVKDGIRH--------IRALANRVLNKEGEVERLLGINM------------------- 538 +T + R+ A + ++ + +L + Sbjct: 568 FLTSPNTTLWLDKAKYFGWRSSACFPIQRDQKPFAVLNVYHESTNAFDSEAIALLQEMAS 627 Query: 539 DMT------EVKQLNEALFQEK----ERLHITLDSIGEAVVCI--DMAMKIT--FMNPVA 584 D++ + +Q + L E +R++ ++ + + + F++ Sbjct: 628 DISFALDNFDREQKKQKLMSELDYANKRINQIVNLSPAVIYTLKPNAEGIFHSDFISENI 687 Query: 585 EKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDV 644 +++G+ ++E L + HI D +++ ++ +GG + Sbjct: 688 YQITGYAKDEWL-KDNFWLDHIHTEDLAAALDS-KKILFETGSLNHQYRFMHANGGYIWI 745 Query: 645 HYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSA 682 +T +G + V D+T+ +L +A Sbjct: 746 EDQLTLTRDNNGKPLEIVGAWLDITDRLSAEEKLRLNA 783 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 71/218 (32%), Gaps = 7/218 (3%) Query: 278 LPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGY 337 L + + + + + + E S G+ + + + N A GY Sbjct: 760 LEIVGAWLDITDRLSAEEKLRLN----AKVFESSRDGIVITDKNNKIISVNNAFTTITGY 815 Query: 338 SQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLV 397 +E+ G L + + I G + + E +NG++ L++S + Sbjct: 816 EAKEVVGKNPHMLASEKLEESFYSAMWDSI-GVMGYWQGEVINQRKNGEIYTQWLSISTI 874 Query: 398 RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKR 457 + DG I I DI+E K E+ Q L L N + + + KR Sbjct: 875 KDADGKISQHIGIISDISERKVAEERIQFLSNFDPLTNLPNKNLL--NDRTKLALATAKR 932 Query: 458 MFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSL 495 + + ++ E + P K + + Sbjct: 933 LKTAVTLMFVDLDRFKFINESLGPSIGDQVVKELAERF 970 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 47/292 (16%), Positives = 105/292 (35%), Gaps = 19/292 (6%) Query: 271 LPFLLILLPANIMTMVMYAFRAERK----HISESETHFRNAMEYSAIGMALV--GTEGQW 324 + L + + + +++ + + + S + + EG + Sbjct: 619 IALLQEMASDISFALDNFDREQKKQKLMSELDYANKRINQIVNLSPAVIYTLKPNAEGIF 678 Query: 325 L--QTNKALCQFLGYSQEELRGLTFQ-QLTWPEDLNKDLQQVEKLISGEINTYSMEKRYY 381 ++ + Q GY+++E F EDL L K I E + + + R+ Sbjct: 679 HSDFISENIYQITGYAKDEWLKDNFWLDHIHTEDLAAALDS--KKILFETGSLNHQYRFM 736 Query: 382 NRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIG 441 + NG +W ++L R +G PL + DI + E+ + + E+ G Sbjct: 737 HANGGYIWIEDQLTLTRDNNGKPLEIVGAWLDITDRLSAEEKLRLNAK----VFESSRDG 792 Query: 442 IWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQH-AEKVIRDSLQSRSP 500 I + I S + + + E + + DS+ Sbjct: 793 IVITDKNNKIISVNNAFTTITGYEAKEVVGKNPHM--LASEKLEESFYSAMWDSIGVMGY 850 Query: 501 FKLEFRITVKDGIRHIRALA-NRVLNKEGEVERLLGINMDMTEVKQLNEALF 551 ++ E K+G + + L+ + + + +G++ + +GI D++E K E + Sbjct: 851 WQGEVINQRKNGEIYTQWLSISTIKDADGKISQHIGIISDISERKVAEERIQ 902 Score = 95.5 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 57/168 (33%), Gaps = 18/168 (10%) Query: 551 FQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGD 610 + R D + V+ +D + N A M G+ Q E LG+ L VL Sbjct: 349 QLAESRYQKLFDQASDGVLVLDHQHQFIAANLAATNMLGYQQGELLGMRLPDVLINNVTK 408 Query: 611 NGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTE 670 + N+ S ++ + + G + + L + +I+D+TE Sbjct: 409 HPEFNTNLISDIPTKDEWQ----YRRKDGSRFIAEVNCRKL-DKN----YYFTIIRDLTE 459 Query: 671 SRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVF 718 + ++ + LT L ++ + + H+ +V Sbjct: 460 RKLAENRILH------LTQL---YQALSEVNQAIVRMGDDHELFPVVC 498 >UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NYX4_CHRVO Length = 795 Score = 889 bits (2298), Expect = 0.0, Method: Composition-based stats. Identities = 162/800 (20%), Positives = 311/800 (38%), Gaps = 25/800 (3%) Query: 307 AMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKL 366 + +S M+L +G++L N A + +G S E L G + + ED + +Q +++ Sbjct: 1 MVNHSPTMMSLKDMDGRYLLVNAAYARRVGVSAESLLGRRPEDVFDAEDARQIREQDQQV 60 Query: 367 ISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQ 426 ++ E NG + L + + DG P + DI + ++ ++ ++ Sbjct: 61 LNLLSPRQFDEHFVL--NGVETYLLASKFPLFDADGRPAGVGSVDTDITQARQEQKAKRE 118 Query: 427 LMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQH 486 +R E +GI+ + + + ++ E+ P + V E + Sbjct: 119 AEDRYLALVEQSLVGIYIMQ-DEKLAYVNPKLAEIMGYQPEEMEGMTMPQLLVPGEAERL 177 Query: 487 AEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQL 546 ++++R + S R KDG+ + +R+ G + ++G+ MD++E Sbjct: 178 RQQLLRRFRDNISVMHYATRGLRKDGVLVDMEVHSRLFELNGR-KAVIGVVMDISERLLA 236 Query: 547 NEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHI 606 + L ++ E ++ +D +I +N +++G+ +EEALG Sbjct: 237 DTNL----RLAAKVFENSAEGILILDAGARIIAVNDAFTRITGYAEEEALGKASRIFSAE 292 Query: 607 TFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQ 666 A + +++ + G Y SI+ L DG V V Sbjct: 293 QQARAAMQ-----QALADCGHWQGEMLDRRKGGQWYPAELSISALRDEDGLLSNYVAVFS 347 Query: 667 DVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKA 726 D+T+ ++ +L + A+HD LT L NR+ L L ++ R A++FIDLDRFK Sbjct: 348 DITQRKEAEERLQFLANHDPLTRLPNRSRLTASLDEALTRMDGEDGRLAVMFIDLDRFKL 407 Query: 727 VNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN-VESARFIATRII 785 +NDS GH GD LL E+A + ++ +LARLGGDEF LL+ + +A+ I+ Sbjct: 408 INDSFGHQVGDQLLCEIAIRLSRVVGERGMLARLGGDEFTLLMSGFDSHHQLADMASDIL 467 Query: 786 SAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEP 845 +A+ E + S GI++ + A ++ AD+A Y +K G+ ++ Sbjct: 468 AALGK-PLCLEAHEVFITGSIGISVFPHDGRDARTLLKNADVAMYRAKEAGKNTYQFFDI 526 Query: 846 QQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEII 904 ER + + ++ ++ + E +L W + ++ Sbjct: 527 GMNTQTFERLLLENGLRM-ALERHEFELHYQPQ--LSAGERALAGAEALLRWRHPQLGLV 583 Query: 905 DEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA--VASKGISISLPLSVAGLSSATLVND 962 F + L + V E +Q A + +++ LS +L Sbjct: 584 PPARFIALAEETGLIKPIGDWVLREACRQLAAWDAQGLRVPRLAVNLSPRQFGQPSLPAK 643 Query: 963 LLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSL 1018 + L+ + L L L I I+ + +L+ G + + G + L Sbjct: 644 VAGALQAAGLAAGRLELEITESMIMQSPTEAVSLLSELKSLGVWLSIDDFGTGYSSLSHL 703 Query: 1019 KANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIG 1078 K D L +D + + + + I A++L + +A V L G G Sbjct: 704 KRFPLDTLKIDQSFVEGLPDDDDNAAIAEAILAMAKKLKFQVVAEGVESEEQAAFLEGKG 763 Query: 1079 VDLIYGEVIADAQPLDLLVN 1098 ++ G P Sbjct: 764 CHVLQGYHFGRPLPAGEFAA 783 Score = 140 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 46/270 (17%), Positives = 97/270 (35%), Gaps = 12/270 (4%) Query: 283 MTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEEL 342 + + R E+K E+E + +E S +G+ ++ + + N L + +GY EE+ Sbjct: 102 VDTDITQARQEQKAKREAEDRYLALVEQSLVGIYIM-QDEKLAYVNPKLAEIMGYQPEEM 160 Query: 343 RGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDG 402 G+T QL P + + QQ+ + I+ R ++G +V + L Sbjct: 161 EGMTMPQLLVPGEAERLRQQLLRRFRDNISVMHYATRGLRKDGVLVDMEVHSRLFELNGR 220 Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELY 462 I + DI+E + + + E GI + I + + + Sbjct: 221 KA--VIGVVMDISERLLADTNLRLAAK----VFENSAEGILILDAGARIIAVNDAFTRIT 274 Query: 463 EIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHI-RALAN 521 Q A ++ +L ++ E K G + + Sbjct: 275 GYAEEEALGKASRIFSA----EQQARAAMQQALADCGHWQGEMLDRRKGGQWYPAELSIS 330 Query: 522 RVLNKEGEVERLLGINMDMTEVKQLNEALF 551 + +++G + + + D+T+ K+ E L Sbjct: 331 ALRDEDGLLSNYVAVFSDITQRKEAEERLQ 360 Score = 119 bits (300), Expect = 6e-25, Method: Composition-based stats. Identities = 44/297 (14%), Positives = 94/297 (31%), Gaps = 18/297 (6%) Query: 294 RKHISESETHFRN-AMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTW 352 + ++++ E SA G+ ++ + + N A + GY++EE G + + Sbjct: 232 ERLLADTNLRLAAKVFENSAEGILILDAGARIIAVNDAFTRITGYAEEEALGKASRIFS- 290 Query: 353 PEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIE 412 + + + + + E + G A L++S +R DG ++A Sbjct: 291 ---AEQQARAAMQQALADCGHWQGEMLDRRKGGQWYPAELSISALRDEDGLLSNYVAVFS 347 Query: 413 DINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNW 472 DI + K E+ Q L L + L + D L + + Sbjct: 348 DITQRKEAEERLQFLANHDPLTRLPNRSRL-TASLDEALTRMDGEDGRL-AVMFIDLDRF 405 Query: 473 QVWYECVLPEDRQHAEKVI----------RDSLQSRSPFKLEFRITVKDGIRHIRALANR 522 ++ + + I R L + ++ D + +A+ Sbjct: 406 KLINDSFGHQVGDQLLCEIAIRLSRVVGERGMLARLGGDEFTLLMSGFDSHHQLADMASD 465 Query: 523 VLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITF 579 +L G+ L + +T + L + A+ A K T+ Sbjct: 466 ILAALGKPLCLEAHEVFITGS-IGISVFPHDGRDARTLLKNADVAMYRAKEAGKNTY 521 >UniRef50_B8DLV2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLV2_DESVM Length = 896 Score = 889 bits (2298), Expect = 0.0, Method: Composition-based stats. Identities = 159/841 (18%), Positives = 285/841 (33%), Gaps = 57/841 (6%) Query: 303 HFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQ 362 R ++ + + L EG++L N G +++ GL+ + + + L + Sbjct: 50 LLRALLDNPLVALFLRDGEGRYLAANHLYADLAGVPGKDVVGLSPRDIFPHAVASALLDE 109 Query: 363 VEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTE- 421 ++ + +R + +A + P + D+ L E Sbjct: 110 DRRVAEDSTPL--LCERMLPADEAERVFRVAKLPLPPEVAGPGAVLGLAFDVTALVEAEI 167 Query: 422 --------QVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQ 473 + R E ++ I ++ + P + + Sbjct: 168 EEEVRQRTAALAESTARFRALFELAPDAVYVRGEGGRIVDCNRAAERMSGHPRETLLSLR 227 Query: 474 VWYEC--------------------VLPEDRQHAEKVIRDSLQSRSPFK------LEFRI 507 P+ + D S F +E Sbjct: 228 TADLLPPDIEVRIDNLLTGCPLPVATHPDSTPAEPRQGTDGANPGSGFCPTGGFCMEGIC 287 Query: 508 TVKDGIRHIRALANRVLNK--EGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIG 565 T G + G+ L + D++ + + Sbjct: 288 TAAHGPHEAEVSVEPLPLSLLRGKGMTALVVVHDISGRRTAERQ----ARLFERVFRNAL 343 Query: 566 EAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSR 625 E + D I +NP ++G+ ++A+G + + + E+++ A Sbjct: 344 EGICITDPEGIIVAVNPAFTTITGYPADDAVGQSPRLLK--SHHHDSAFYEDMWRALVEE 401 Query: 626 SAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHD 685 E ++ R+G Y SI+ + G V V D+TE + Q+ + A HD Sbjct: 402 GRWEDEIWNRRRNGEVYPEWLSISAIPGPTGRTEYYVAVFHDITELKAKESQIQHQAHHD 461 Query: 686 ALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELAS 745 ALT L NRA +L + + ++ A++ +DLD FK VNDS GH GD L++ A Sbjct: 462 ALTGLPNRALLRDRLGMAINGARREDRKVAVLSVDLDNFKQVNDSLGHMVGDIYLQQAAE 521 Query: 746 LMLSMLRSSDVLARLGGDEFGLLLPDCNVE-SARFIATRIISAVNDYHFIWEGRVHRVGA 804 M M+R D LAR+GGDEF ++L D E A +A R+++ D + VGA Sbjct: 522 QMRQMVRPQDTLARVGGDEFVVVLQDVEGERDAAQVAERLLARFTD-PVRVQEHELFVGA 580 Query: 805 SAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWR 864 S GI L D+ ++ ADIA +K G+ R ++ P R ++ D R Sbjct: 581 SVGIALFPDDGDDPDTLVRNADIAMSRAKEQGKRRYHLFTPAMNDRAVRRLSLEGDL-HR 639 Query: 865 MIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALD 923 + + + + +L W +G F L L Sbjct: 640 ALAAGDITAHYQPRVD--LNTGLITGMEALARWIRADGSQEHPAEFIPLAESTGLIVPLG 697 Query: 924 RRVFHEFFQQAAK--AVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLII 981 + + + +++ LSV LV + + L + LPP LL L I Sbjct: 698 EHMLRLACAKTRALCDAGHADLHVAVNLSVHQFRHRNLVGMVADVLAETGLPPHLLELEI 757 Query: 982 PAEAILDHAE----SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQ 1037 I+ + + +L G + + G LK L +D ++ Sbjct: 758 TESTIVTDVDHTIRKLNQLAEMGIALSVDDFGTGYSSLYQLKNLPLTSLKIDRSFIRDIP 817 Query: 1038 GNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 + D + I A RLG++ +A V P ++ L G + G + + P D Sbjct: 818 DDPNDAAIAATIITMADRLGLRVVAEGVETPEQLNFLLLEGCHEVQGFLFSRPLPPDEFT 877 Query: 1098 N 1098 Sbjct: 878 A 878 Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats. Identities = 40/276 (14%), Positives = 84/276 (30%), Gaps = 7/276 (2%) Query: 278 LPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGY 337 + A ++ + R + F + G+ + EG + N A GY Sbjct: 313 MTALVVVHDISGRRTAERQAR----LFERVFRNALEGICITDPEGIIVAVNPAFTTITGY 368 Query: 338 SQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLV 397 ++ G + + L + + + + + E + E RNG+V L++S + Sbjct: 369 PADDAVGQSPRLLKSHHHDSAFYEDMWRALVEE-GRWEDEIWNRRRNGEVYPEWLSISAI 427 Query: 398 RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKR 457 G Y++A DI ELK E Q L + + + +R Sbjct: 428 PGPTGRTEYYVAVFHDITELKAKESQIQHQAHHDALTGLPNRALL--RDRLGMAINGARR 485 Query: 458 MFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIR 517 + N++ + + + + ++ + D + Sbjct: 486 EDRKVAVLSVDLDNFKQVNDSLGHMVGDIYLQQAAEQMRQMVRPQDTLARVGGDEFVVVL 545 Query: 518 ALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQE 553 + ERLL D V++ + Sbjct: 546 QDVEGERDAAQVAERLLARFTDPVRVQEHELFVGAS 581 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 52/378 (13%), Positives = 118/378 (31%), Gaps = 64/378 (16%) Query: 265 MSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQW 324 ++ + L + A + + R ++ES FR E + + + G G+ Sbjct: 146 VAGPGAVLGLAFDVTALVEAEIEEEVRQRTAALAESTARFRALFELAPDAVYVRGEGGRI 205 Query: 325 LQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISG--------------- 369 + N+A + G+ +E L L L P+ +++ L++G Sbjct: 206 VDCNRAAERMSGHPRETLLSLRTADLLPPD----IEVRIDNLLTGCPLPVATHPDSTPAE 261 Query: 370 ---------------EINTYSMEKRYYNRNGDVVWALLAVSLVRHT--DGTPLYFIAQIE 412 + ME +G A ++V + + G + + + Sbjct: 262 PRQGTDGANPGSGFCPTGGFCMEGICTAAHG-PHEAEVSVEPLPLSLLRGKGMTALVVVH 320 Query: 413 DINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNW 472 DI+ + E + GI + + I + + + P Sbjct: 321 DISGRRTAE----RQARLFERVFRNALEGICITDPEGIIVAVNPAFTTITGYPADDAVGQ 376 Query: 473 QVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA-NRVLNKEGEVE 531 D + + +L ++ E ++G + L+ + + G E Sbjct: 377 SPRLLKSHHHD-SAFYEDMWRALVEEGRWEDEIWNRRRNGEVYPEWLSISAIPGPTGRTE 435 Query: 532 RLLGINMDMTEVKQLNEALFQE---------------KERLHITLDSIG-----EAVVCI 571 + + D+TE+K + + ++RL + ++ AV+ + Sbjct: 436 YYVAVFHDITELKAKESQIQHQAHHDALTGLPNRALLRDRLGMAINGARREDRKVAVLSV 495 Query: 572 DMAMKITFMNPVAEKMSG 589 D+ +N M G Sbjct: 496 DLDN-FKQVNDSLGHMVG 512 >UniRef50_B4B330 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B330_9CHRO Length = 1188 Score = 889 bits (2297), Expect = 0.0, Method: Composition-based stats. Identities = 182/825 (22%), Positives = 342/825 (41%), Gaps = 37/825 (4%) Query: 283 MTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEEL 342 ++ + + + + +SE FR ++S IG+A+ EG+ ++ N+A Q +G+++ EL Sbjct: 377 ISEDITERKRAEEALKKSEEQFRLVFQHSPIGIAIATPEGKLVRVNEAFSQMMGFTEAEL 436 Query: 343 RGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDG 402 T LT+P+DL ++ +KL++GEI Y +EKRY + G V++ +L V L+R Sbjct: 437 LKRTCGDLTYPDDLKNEIPLHQKLLAGEIAYYRLEKRYLTKKGQVLYGMLHVGLIRDEQD 496 Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELY 462 PL + Q+ DI+E + E ++ +R++ G+ + NI + +L+ Sbjct: 497 KPLNLVGQVVDISEKTQAEIALRESEDRLSRIITTISDGLIVVNNQGNIKFINPAGEKLF 556 Query: 463 EIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANR 522 V E I + + + Sbjct: 557 GRSQEELLEQHFGVPFV-------------------DGKTTEIFIRHANQQLIVAEMRVG 597 Query: 523 VLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAM-KITFMN 581 ++ E + L+ + D+TE KQ+ +AL + ++RL L+SI + V + ++N Sbjct: 598 LIIWEQQKAHLISL-RDITERKQIEKALSESEQRLESILNSIEDVVWSTSATTLNLIYLN 656 Query: 582 PVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGS 641 P E++ G + E+ L ++ D+ L++ + A E + + G Sbjct: 657 PATERVYGCSIEQLLAEG-NLWFNLVHPDDQALIDAHFKALEDTGHSEYEYRIVRPDGTV 715 Query: 642 YDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLR 701 ++ + G I + D+TE + QL Y+A HD LT L NR ++L Sbjct: 716 RWLYSRSRTIYDPTGKPIRFEGIDSDITERKSFTEQLQYNAYHDPLTSLPNRIFLLEKLE 775 Query: 702 ILLQTVN-STHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARL 760 L+ + A++F+DLD FK VNDS GH GD LL +A + + L LAR Sbjct: 776 EALKKNQNRENIFFAVLFLDLDDFKVVNDSLGHIVGDQLLIAIAQRLKTSLSVPHTLARF 835 Query: 761 GGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAA 819 GGDEF +LL + + + A +I + + + G+ + S GI L D + Sbjct: 836 GGDEFTILLEEIQSTDEPLKAAQKIHNDLTQ-PYDLNGQQVFISTSIGIALSDPSYIHPQ 894 Query: 820 EVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVA 879 E++ AD A Y +K G+G V++ Q +R + ++ + + I+ + ++ + Sbjct: 895 EILRDADTAMYQAKRWGKGGYAVFDQQMHLRAVKRLHLEIELR-QAIELKEFLLYYQPIV 953 Query: 880 SPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV 938 S + +L W + +I F + L + + + + +Q Sbjct: 954 S--LSTGYLTGFEALIRWQHPKKGLISPVEFIPIAEETGLIVPMGKWITQQACRQLKLWQ 1011 Query: 939 AS----KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES-- 992 + IS+ LS L ++ L+ ++ E L + + P L L I ++++ + Sbjct: 1012 EQYNLKNPLQISVNLSSKQLRNSHLIEEIDEILAQTGIDPSSLKLEITESMLMENVDIAM 1071 Query: 993 --VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQ 1050 + +LR + L G + L + +D +Q + ++ I Sbjct: 1072 NILIELRKRNIELCLDDFGTGYSSLSYLHRFPVTTVKIDRSFVMQMQPGNSNAEIVHAII 1131 Query: 1051 GHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDL 1095 A L M A V L + L + + G + P Sbjct: 1132 TLAHSLEMTVTAEGVETQLQLQQLQWLECEQAQGYFFSKPLPPKE 1176 Score = 229 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 73/389 (18%), Positives = 140/389 (35%), Gaps = 20/389 (5%) Query: 295 KHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPE 354 K F S + + G +G + N A LGYS EEL F +L P+ Sbjct: 139 KQAEIQRERF---FTLSLDLLCIAGFDGYFKCLNPAWETTLGYSTEELISQPFIELIHPD 195 Query: 355 DLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDI 414 + L ++E+L G++ TY E RY R G W L A DI Sbjct: 196 EREAALTEIERLGRGQL-TYHFENRYRTREGTYRWLTLTAVPYVEEG----LIYAVAHDI 250 Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKP----NIFSWDKRMFELYEIPPHIKP 470 + K+TE QQ + + + ++ + KP I W+K +++ I Sbjct: 251 TKRKQTEAEIQQTRNFLQTMIDHLPLAVFVKDGKPETFSQIILWNKTCEKIFGISATEAI 310 Query: 471 NWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKL--EFRITVKDGIRHIRALANRVLNKEG 528 + + + R++ R P ++ E + G R + + + +++ Sbjct: 311 GSTTFEHFSDS-QAEFFYQKDRETFARRMPLEIPEEEADSYSLGKRLLHTVKIPLYDEQD 369 Query: 529 EVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMS 588 + + LL I+ D+TE K+ EAL + +E+ + + K+ +N +M Sbjct: 370 QPQYLLCISEDITERKRAEEALKKSEEQFRLVFQHSPIGIAIATPEGKLVRVNEAFSQMM 429 Query: 589 GWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRS--AIEQDVVLHCRSGGSYDVHY 646 G+T+ E L + + N ++ + + + G Sbjct: 430 GFTEAELLKRTCGDLTYPDDLKNEIP---LHQKLLAGEIAYYRLEKRYLTKKGQVLYGML 486 Query: 647 SITPLSTLDGSNIGSVLVIQDVTESRKML 675 + + + V + D++E + Sbjct: 487 HVGLIRDEQDKPLNLVGQVVDISEKTQAE 515 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 74/528 (14%), Positives = 172/528 (32%), Gaps = 54/528 (10%) Query: 173 LGLLFKPHYLLRHRNPRLLFESLLTLAITLTL--SWLSMLYLPWPFTFIIVLLMWSAVRL 230 +G+ + R F +L + + + L W T + Sbjct: 129 IGVKTDVTEPKQAEIQRERFFTLSLDLLCIAGFDGYFKCLNPAWETTLGYSTEELISQPF 188 Query: 231 PRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMP-WLPFLLILL----PANIMTM 285 + + + + + R WL + + Sbjct: 189 IELIHPDEREAALTEIERLGRGQLTYHFENRYRTREGTYRWLTLTAVPYVEEGLIYAVAH 248 Query: 286 VMYAFRAERKHISESETHFRNAMEYSAIGMALVGTE----GQWLQTNKALCQFLGYSQEE 341 + + I ++ + +++ + + + + Q + NK + G S E Sbjct: 249 DITKRKQTEAEIQQTRNFLQTMIDHLPLAVFVKDGKPETFSQIILWNKTCEKIFGISATE 308 Query: 342 LRGLTFQQLTWPEDLNKDLQQVEKLISG---------EINTYSMEKRYYNRNGDVVWALL 392 G T + Q+ + + E ++YS+ KR + Sbjct: 309 AIGSTTFEHFSDSQAEFFYQKDRETFARRMPLEIPEEEADSYSLGKRLLH---------T 359 Query: 393 AVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIF 452 + P Y + EDI E KR E+ ++ E+ L + IGI + + Sbjct: 360 VKIPLYDEQDQPQYLLCISEDITERKRAEEALKKSEEQFRLVFQHSPIGIAIATPEGKLV 419 Query: 453 SWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSP-FKLEFR-ITVK 510 ++ ++ + + P+D ++ + + L ++LE R +T K Sbjct: 420 RVNEAFSQMMGFTEAELL-KRTCGDLTYPDDLKNEIPLHQKLLAGEIAYYRLEKRYLTKK 478 Query: 511 DGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVC 570 + + + +++ + L+G +D++E Q AL + ++RL + +I + ++ Sbjct: 479 GQVLYGMLHVGLIRDEQDKPLNLVGQVVDISEKTQAEIALRESEDRLSRIITTISDGLIV 538 Query: 571 IDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQ 630 ++ I F+NP EK+ G +QEE L + + + I Sbjct: 539 VNNQGNIKFINPAGEKLFGRSQEELLEQHFGVPF-VDGKTTEIFIRHANQQL-----IVA 592 Query: 631 DVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQL 678 ++ + G + ++D+TE +++ + L Sbjct: 593 EMRV----GLIIWEQQKAHLI------------SLRDITERKQIEKAL 624 Score = 162 bits (410), Expect = 1e-37, Method: Composition-based stats. Identities = 51/277 (18%), Positives = 97/277 (35%), Gaps = 25/277 (9%) Query: 278 LPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGY 337 L + + + ESE + + G+ +V +G N A + G Sbjct: 499 LNLVGQVVDISEKTQAEIALRESEDRLSRIITTISDGLIVVNNQGNIKFINPAGEKLFGR 558 Query: 338 SQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLV 397 SQEEL F + G+ E + N ++ A + V L+ Sbjct: 559 SQEELLEQHFGV---------------PFVDGKT----TEIFIRHANQQLIVAEMRVGLI 599 Query: 398 RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKP-NIFSWDK 456 + + DI E K+ E+ + +R+ + +W N+ + Sbjct: 600 IWEQQKA--HLISLRDITERKQIEKALSESEQRLESILNSIEDVVWSTSATTLNLIYLNP 657 Query: 457 RMFELYEIPPHIKP-NWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IR 514 +Y +W+ V P+D+ + + + + E+RI DG +R Sbjct: 658 ATERVYGCSIEQLLAEGNLWFNLVHPDDQALIDAHFKALEDTGHS-EYEYRIVRPDGTVR 716 Query: 515 HIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALF 551 + + + + + G+ R GI+ D+TE K E L Sbjct: 717 WLYSRSRTIYDPTGKPIRFEGIDSDITERKSFTEQLQ 753 Score = 145 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 54/286 (18%), Positives = 97/286 (33%), Gaps = 18/286 (6%) Query: 398 RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKR 457 + G I D+ E K+ E Q TL+ + I ++ K + Sbjct: 119 QDEQGNCTNCIGVKTDVTEPKQAEI---QRERFFTLSLDLLCIAGFDGYFKC----LNPA 171 Query: 458 MFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIR 517 + Q + E + P++R+ A I + + + E R ++G Sbjct: 172 WETTLGYSTEELIS-QPFIELIHPDEREAALTEIERLGRGQLTYHFENRYRTREGTYRWL 230 Query: 518 ALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMA--- 574 L +EG + + D+T+ KQ + Q + L +D + AV D Sbjct: 231 TLTAVPYVEEG---LIYAVAHDITKRKQTEAEIQQTRNFLQTMIDHLPLAVFVKDGKPET 287 Query: 575 -MKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQ-DV 632 +I N EK+ G + EA+G T H + + R +E + Sbjct: 288 FSQIILWNKTCEKIFGISATEAIGST--TFEHFSDSQAEFFYQKDRETFARRMPLEIPEE 345 Query: 633 VLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQL 678 S G +H PL + + +D+TE ++ L Sbjct: 346 EADSYSLGKRLLHTVKIPLYDEQDQPQYLLCISEDITERKRAEEAL 391 >UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=16 Tax=Proteobacteria RepID=A1RPJ9_SHESW Length = 1511 Score = 885 bits (2289), Expect = 0.0, Method: Composition-based stats. Identities = 165/695 (23%), Positives = 297/695 (42%), Gaps = 28/695 (4%) Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQV 474 + + E + ER+ LA A G G+W+W +K N + H + Sbjct: 823 QQQREFETSIRASEERLKLALWASGDGMWDWNIKENKVYRTNMDASVSHWSSH-----NL 877 Query: 475 WYECVLPEDRQHAEKVIRDSLQSRSPF-KLEFRITVKDGIRHIRALANRVL--NKEGEVE 531 +E + PEDR+ + + + LQ R+PF ++E+RI G +V+ + + Sbjct: 878 LHENMHPEDREKFKYELAEHLQGRTPFFEIEYRIEGAFGKWIWILDRGKVVETDAHMQPM 937 Query: 532 RLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWT 591 R+ G N ++T K + L + L+S+ EAVV + KI +NP ++G++ Sbjct: 938 RMTGTNRNITSRKLIENELVLSSQ----VLNSMNEAVVVAGLDYKIRSVNPAFSAITGYS 993 Query: 592 QEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPL 651 + + ++H+ + L +I ++ + + + V I + Sbjct: 994 ERQITDKY---LVHLAYKQQRELFNSIEQQLLRHKHWVGEIWIRNKQRKAILVWLEINQV 1050 Query: 652 STLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTH 711 + G V V D+TE +K + L + AS D LT L NR F+ +L + + + Sbjct: 1051 IDIKGETSHFVAVFTDITERKKAEQDLRFLASFDTLTGLPNRTLFQDRLNHAITQAHRAN 1110 Query: 712 QRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD 771 AL+F+DLDRFK +NDS GH GD LL+ A + + +R D +ARLGGDEF ++L Sbjct: 1111 NIVALLFLDLDRFKHINDSMGHHVGDLLLKAAAKRLQNAVREGDTVARLGGDEFTIILEG 1170 Query: 772 C-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACY 830 ++A I+ +++ A F+ E + + S GI+L ++ A ++ AD A Y Sbjct: 1171 VAKTKAATLISEKVLRAF-QTPFLLEDKSLTISTSIGISLYPNDADNADSLIKFADTAMY 1229 Query: 831 ASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLW 890 +K+ GR Y + + + + I N+L ++ S R + Sbjct: 1230 HAKSLGRNNFQFYTHKLNEIATRHVLLEAGL-KQAIHRNELSLVYQPKFSLR--DGSLTG 1286 Query: 891 LISLKLWSC-EGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA--VASKGISISL 947 L +L W E I F + + + + V + QQ A+ + IS+++ Sbjct: 1287 LEALLRWHHTELGPISPVEFIPLAEETGIINQIGHWVINHACQQLAEWNALGFNNISMAV 1346 Query: 948 PLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRI 1003 LS L A +++ + L S LP + L L + I+ + + + KL+ G I Sbjct: 1347 NLSARQLK-ADIISTIEVALAVSGLPAQSLELELTESMIMGNPQDSVSILSKLKALGLTI 1405 Query: 1004 VLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAG 1063 + G + LK D L +D E ++ + D + + I A L + +A Sbjct: 1406 AIDDFGTGYSSLSYLKRFPIDTLKIDREFVRDITNDPDDAAITSAIIALAHSLELNVVAE 1465 Query: 1064 PVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 V ++ L G D + G +++ + Sbjct: 1466 GVETQAQLNFLGLQGCDEVQGFLLSKPLSAKDCLT 1500 Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 49/309 (15%), Positives = 94/309 (30%), Gaps = 19/309 (6%) Query: 251 AADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISE-------SETH 303 + L+ P+ L LL ++ ++ + +R+ E SE Sbjct: 779 GSQTLLVNLKVQAPFYRTPFAYTLYCLLAIGLLIWGLHWRKQKRQQQREFETSIRASEER 838 Query: 304 FRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQV 363 + A+ S GM + + +S L PED K ++ Sbjct: 839 LKLALWASGDGMWDWNIKENKVYRTNMDASVSHWSSHNLLHEN----MHPEDREKFKYEL 894 Query: 364 EKLISGEINTYSMEKRYYNRNGDVVWALLAVSLV-RHTDGTPLYFIAQIEDINELKRTEQ 422 + + G + +E R G +W L +V P+ +I K E Sbjct: 895 AEHLQGRTPFFEIEYRIEGAFGKWIWILDRGKVVETDAHMQPMRMTGTNRNITSRKLIEN 954 Query: 423 VNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPE 482 + + + L I S + + + + + Sbjct: 955 ELVLSSQ----VLNSMNEAVVVAGLDYKIRSVNPAFSAITGYSERQITD-KYLVHLAYKQ 1009 Query: 483 DRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRAL-ANRVLNKEGEVERLLGINMDMT 541 R+ I L + E I K + L N+V++ +GE + + D+T Sbjct: 1010 QRELFN-SIEQQLLRHKHWVGEIWIRNKQRKAILVWLEINQVIDIKGETSHFVAVFTDIT 1068 Query: 542 EVKQLNEAL 550 E K+ + L Sbjct: 1069 ERKKAEQDL 1077 Score = 103 bits (257), Expect = 5e-20, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 78/240 (32%), Gaps = 15/240 (6%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + + + + S + + + G + + N A GYS+ ++ Sbjct: 946 ITSRKLIENELVLS----SQVLNSMNEAVVVAGLDYKIRSVNPAFSAITGYSERQITDKY 1001 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 L + + ++L+ + + E N+ + L ++ V G + Sbjct: 1002 LVHLAYKQQRELFNSIEQQLLRHK--HWVGEIWIRNKQRKAILVWLEINQVIDIKGETSH 1059 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP 466 F+A DI E K+ EQ + L TL + + + R + + Sbjct: 1060 FVAVFTDITERKKAEQDLRFLASFDTLTGLPNRTLF--QDRLNHAITQAHRANNIVALLF 1117 Query: 467 HIKPNWQVWYECV--LPED--RQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANR 522 ++ + + D + A K ++++++ R+ + + +A Sbjct: 1118 LDLDRFKHINDSMGHHVGDLLLKAAAKRLQNAVREGDTV---ARLGGDEFTIILEGVAKT 1174 >UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderiales RepID=B2T9B2_BURPP Length = 1037 Score = 884 bits (2285), Expect = 0.0, Method: Composition-based stats. Identities = 152/694 (21%), Positives = 267/694 (38%), Gaps = 29/694 (4%) Query: 419 RTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYE- 477 + ++ E+ + W + + + Sbjct: 340 AMTKELRENEEKFRAIADCTVNWEIWWGTDGKPRWINSAVEAYIGYTVDECMALPDFAGT 399 Query: 478 CVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIR-HIRALANRVLNKEGEVERLLGI 536 + P D + +LQ LEFR KDG + A + + +GE Sbjct: 400 VIYPADIPRVAPEFQKALQGLRGDDLEFRCVRKDGSLMWLSASWVPITDSKGEFIGFRTS 459 Query: 537 NMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEAL 596 D+TE KQ+ L + DS+ E ++ D + I +N + +G+T EE + Sbjct: 460 GRDITERKQVEAEL----RIAAVAFDSM-EPMMITDASATILRVNSAFTECTGYTAEEIV 514 Query: 597 GVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDG 656 G + + + + ++ S + +V ++G Y +I+ + + +G Sbjct: 515 GQTPRVLR--SGRHDDAFFQEMWEEIHSAGGWQGEVWDRRKNGEVYPKWLTISAVMSDNG 572 Query: 657 SNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHAL 716 + V D+TE + ++ A DALT L NR +LR + AL Sbjct: 573 TVSHYVGTHHDITERKIAEERIKELAFFDALTRLPNRTLLLDRLRQAITASARNEACGAL 632 Query: 717 VFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN--- 773 +FIDLD FK +ND+ GH GD LL+++A + + SD +AR+GGDEF ++L + + Sbjct: 633 LFIDLDHFKTLNDTLGHDKGDLLLQQVARRLADSVLESDTVARVGGDEFVVVLGNLHKNR 692 Query: 774 ---VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACY 830 + RI++ + + +R AS G T+ + E++ QAD+A Y Sbjct: 693 QEAANQTEAVGERILAVLG-SPYHLGKIEYRTSASIGATVFRGHQASIDELLKQADLAMY 751 Query: 831 ASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLW 890 SK GR V ++P +RAA+ + I++NQ ++ R Sbjct: 752 KSKERGRNAVRFFDPDMQTVVVQRAALEAGLR-NAIEDNQFLLHYQAQV----VGTRVTG 806 Query: 891 LISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKG---ISIS 946 +L W + I+ F + L AL V Q A+ A ++I+ Sbjct: 807 AEALVRWQHPQRGIVPPAEFIPLAEETGLIVALGSWVLEAACAQLARWAARPDMAHLTIA 866 Query: 947 LPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRLAGCR 1002 + +SV A V+++L + + P L L + ++D+ E + L+ G Sbjct: 867 VNVSVQQFRKADFVDNVLTIIGRTGARPDRLKLELTESVLVDNVQDIIEKMSALKAKGIV 926 Query: 1003 IVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIA 1062 L G + LK D L +D +V + D ++ I A+ LG+ IA Sbjct: 927 FALDDFGIGYSSLSYLKRLPLDQLKIDRSFVRDVLVDSNDAVIARTIVALARSLGLGVIA 986 Query: 1063 GPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 V D L+ G G P++ Sbjct: 987 EGVETEAQRDFLAAAGCYAYQGYYFCRPLPIEDF 1020 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 69/410 (16%), Positives = 134/410 (32%), Gaps = 30/410 (7%) Query: 166 GALALVPLGLLFKPHYLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMW 225 G + +P+ +P + R L+ + + ++ L P I + Sbjct: 194 GFIMYLPIYARGQPQDSVAQRRAHLVGWVYASFRMHDVIASLYGEQPPGLTIAIYDGVET 253 Query: 226 SAV-------------RLPRMEAFLIFLTTVMMVSLMMAADPSL-------LATPRTYLM 265 SA R+ M A + +L M A A P Sbjct: 254 SAAALLHKTPEAPGHHRVTDMAANEYLVVGGHDWTLSMNAQDDFKARFGRNAALPIASTG 313 Query: 266 SHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWL 325 + + L LL L M A K + E+E FR + + GT+G+ Sbjct: 314 TGLSLLLALLTWLMMTGRGRAMRLASAMTKELRENEEKFRAIADCTVNWEIWWGTDGKPR 373 Query: 326 QTNKALCQFLGYSQEELRGLTFQQ--LTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNR 383 N A+ ++GY+ +E L + +P D+ + + +K + G +E R + Sbjct: 374 WINSAVEAYIGYTVDECMALPDFAGTVIYPADIPRVAPEFQKALQGLRGD-DLEFRCVRK 432 Query: 384 NGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIW 443 +G ++W + + + G + F DI E K+ E + + Sbjct: 433 DGSLMWLSASWVPITDSKGEFIGFRTSGRDITERKQVEAELRIAAVAFDSM-----EPMM 487 Query: 444 EWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKL 503 + I + E D + + + + S ++ Sbjct: 488 ITDASATILRVNSAFTECTGYTAEEIVGQTPRVLRSGRHD-DAFFQEMWEEIHSAGGWQG 546 Query: 504 EFRITVKDGIRHIRA-LANRVLNKEGEVERLLGINMDMTEVKQLNEALFQ 552 E K+G + + + V++ G V +G + D+TE K E + + Sbjct: 547 EVWDRRKNGEVYPKWLTISAVMSDNGTVSHYVGTHHDITERKIAEERIKE 596 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 34/252 (13%), Positives = 77/252 (30%), Gaps = 8/252 (3%) Query: 284 TMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELR 343 + + + + A + M + L+ N A + GY+ EE+ Sbjct: 460 GRDITERKQVEAELRIA----AVAFDSM-EPMMITDASATILRVNSAFTECTGYTAEEIV 514 Query: 344 GLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGT 403 G T + L + Q++ + I + E +NG+V L +S V +GT Sbjct: 515 GQTPRVLRSGRHDDAFFQEMWEEIHSAGG-WQGEVWDRRKNGEVYPKWLTISAVMSDNGT 573 Query: 404 PLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYE 463 +++ DI E K E+ ++L L + + + R Sbjct: 574 VSHYVGTHHDITERKIAEERIKELAFFDALTRLPNRTLL--LDRLRQAITASARNEACGA 631 Query: 464 IPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRV 523 + +++ + + + + + L D + ++ Sbjct: 632 LLFIDLDHFKTLNDTLGHDKGDLLLQQVARRLADSVLESDTVARVGGDEFVVVLGNLHKN 691 Query: 524 LNKEGEVERLLG 535 + +G Sbjct: 692 RQEAANQTEAVG 703 >UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax=cellular organisms RepID=Q607T2_METCA Length = 1346 Score = 883 bits (2283), Expect = 0.0, Method: Composition-based stats. Identities = 151/720 (20%), Positives = 284/720 (39%), Gaps = 19/720 (2%) Query: 386 DVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEW 445 ++ V+++ + + + E +R+E ++ ER LA + + IW Sbjct: 620 RGFFSEDIVAVLDTMAMDVSFALDILARDAERERSEMRLRESEERFRLAANSAPVLIWMG 679 Query: 446 ELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEF 505 + ++ + W E + PEDR + +R PF++E+ Sbjct: 680 DTARGCTFFNDMWLNFTGRSLEYELG-DGWLEGMHPEDRSRWICAYSAAFDARKPFEIEY 738 Query: 506 RITVKDGI-RHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSI 564 R+ +DG R I A + GE +G +D+++ K+ +E+L +++ Sbjct: 739 RLRRRDGEYRTILGKATPRFDAGGEFIGYIGSCIDISDRKKGDESLL----LAGKVFEAV 794 Query: 565 GEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTS 624 E+++ D I +NP M+G++ EEA+G + + ++ A Sbjct: 795 RESIIVTDANRVIVAVNPAFSDMTGYSPEEAVGRTPAFLQ--SGRHGKEYYAAMWRAVDQ 852 Query: 625 RSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASH 684 + + + ++G + V +I + G+ + + V D++ ++ + + A + Sbjct: 853 EGSWQGEFWNRRKNGELFAVLETIVTVRDETGAMVNYIGVAADISSLKEAEEHIHHLAYY 912 Query: 685 DALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELA 744 D L+ L NR ++ L + A+VF+D+D FK VNDS GH GD LL +A Sbjct: 913 DPLSALPNRRYLMERAEYALALAERRKEELAVVFLDVDHFKDVNDSLGHQVGDELLVRVA 972 Query: 745 SLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGA 804 + + R +D +ARLGGDEF LLLPD ++ +A +I++A+ F G+ V Sbjct: 973 TQIKEFTRETDTVARLGGDEFALLLPDLGRDAVSQVADKILAALRK-PFEHSGQTFAVTG 1031 Query: 805 SAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWR 864 S GI+L + ++ AD A Y +K GR + Y+P R + + + Sbjct: 1032 SIGISLYPHDGTDFETLLRNADTAMYHAKQQGRNQFRFYDPGMNVDILARLTVLSELR-E 1090 Query: 865 MIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALD 923 I +L + + +L W ++ F L A+ Sbjct: 1091 AIPAGELRTFFQPEID--LANGTLVGAEALVRWQHPTRGLLSPDQFIPVAESNDLIIAIS 1148 Query: 924 RRVFHEFFQQAAKA--VASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLII 981 V + + A+ I++ + L+ LV + L +P L L + Sbjct: 1149 DWVLEDTCRHLAQWKKADQAPITVGVNLAARHFRDPRLVPRVKSLLCRYGVPGSSLQLEL 1208 Query: 982 PAEAILD-HAESV---QKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQ 1037 +LD A+++ Q+L GC + + G + LK L +D ++ Sbjct: 1209 TESTLLDADAQTMIVLQELIALGCSLSIDDFGTGYSSLSYLKNLPIATLKIDQSFVRDIA 1268 Query: 1038 GNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 + D + + LG+K IA V L G D G + + + Sbjct: 1269 FDADDRTISGTVVALGHSLGLKVIAEGVETEEQRRILLEQGCDFGQGYLFSRPLSSKEFI 1328 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 67/447 (14%), Positives = 141/447 (31%), Gaps = 61/447 (13%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 M A K ++ F + Y+ + L + + + N GYS+EEL G+T Sbjct: 344 MQAALEAEKERADLSRRFEYFVRYANDAILLADRDHRIVDVNDRALDLYGYSREELAGMT 403 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 + + + ++++ ++ + E + ++G V L+V + + Sbjct: 404 LADVVAGDVEGVEHGRLDEALARGGGVW--ESVHTRKDGVPVPVELSVRSISVEG--SDF 459 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIW------EWELKPNIFSWDKRM-F 459 A + D+ E KR E + +L + I + ++ I + F Sbjct: 460 VQAIVRDVTERKRIELALARQKNLYSLLAQTNQIIVRHTSEQELFDSVCRIAIRNGGFLF 519 Query: 460 ELYEIPPHIKPNWQV---------WYECVL--PEDRQHAEKVIRDSLQSRSPFKLEFRIT 508 + + + + + D H R ++ + + + Sbjct: 520 AWIGMIENETGDLVPVARYGDDAGYVGRLHLSRADTAHHHGPTRMAVAAGHHVISDDFLA 579 Query: 509 VKDGIRH--------IRALANRVLNKEGEVERL-------------------------LG 535 +RA + + G+V + Sbjct: 580 DPLTRPWHEAGLAAGVRASGAFPIRRFGKVVGAINLYAGERGFFSEDIVAVLDTMAMDVS 639 Query: 536 INMDM----TEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWT 591 +D+ E ++ L + +ER + +S + D A TF N + +G + Sbjct: 640 FALDILARDAERERSEMRLRESEERFRLAANSAPVLIWMGDTARGCTFFNDMWLNFTGRS 699 Query: 592 QEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPL 651 E LG + + D + +A +R E + L R G + TP Sbjct: 700 LEYELG--DGWLEGMHPEDRSRWICAYSAAFDARKPFEIEYRLRRRDGEYRTILGKATPR 757 Query: 652 STLDGSNIGSVLVIQDVTESRKMLRQL 678 G IG + D+++ +K L Sbjct: 758 FDAGGEFIGYIGSCIDISDRKKGDESL 784 Score = 162 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 42/281 (14%), Positives = 94/281 (33%), Gaps = 7/281 (2%) Query: 272 PFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKAL 331 + + A + + ESE FR A + + + + T N Sbjct: 633 TMAMDVSFALDILARDAERERSEMRLRESEERFRLAANSAPVLIWMGDTARGCTFFNDMW 692 Query: 332 CQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWAL 391 F G S E G + + PED ++ + + +E R R+G+ L Sbjct: 693 LNFTGRSLEYELGDGWLEGMHPEDRSRWICAYSAAFDARK-PFEIEYRLRRRDGEYRTIL 751 Query: 392 LAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNI 451 + G + +I DI++ K+ ++ + EA I + I Sbjct: 752 GKATPRFDAGGEFIGYIGSCIDISDRKKGDESLLLAGK----VFEAVRESIIVTDANRVI 807 Query: 452 FSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD 511 + + ++ P + +++ + ++ ++ EF K+ Sbjct: 808 VAVNPAFSDMTGYSPEEAVGRTPAFLQSGRHGKEY-YAAMWRAVDQEGSWQGEFWNRRKN 866 Query: 512 GIRH-IRALANRVLNKEGEVERLLGINMDMTEVKQLNEALF 551 G + V ++ G + +G+ D++ +K+ E + Sbjct: 867 GELFAVLETIVTVRDETGAMVNYIGVAADISSLKEAEEHIH 907 Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 47/141 (33%), Gaps = 1/141 (0%) Query: 299 ESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNK 358 ES E + + + N A GYS EE G T L + Sbjct: 782 ESLLLAGKVFEAVRESIIVTDANRVIVAVNPAFSDMTGYSPEEAVGRTPAFLQSGRHGKE 841 Query: 359 DLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELK 418 + + + E ++ E +NG++ L + VR G + +I DI+ LK Sbjct: 842 YYAAMWRAVDQE-GSWQGEFWNRRKNGELFAVLETIVTVRDETGAMVNYIGVAADISSLK 900 Query: 419 RTEQVNQQLMERITLANEAGG 439 E+ L L+ Sbjct: 901 EAEEHIHHLAYYDPLSALPNR 921 Score = 90.5 bits (224), Expect = 4e-16, Method: Composition-based stats. Identities = 71/517 (13%), Positives = 145/517 (28%), Gaps = 72/517 (13%) Query: 194 SLLTLAITLTLSWLSMLYLPWPFTFIIVL---------LMWSAVRLPRMEAFLIFLTTVM 244 A L + LPW + L S VR R A V Sbjct: 7 GASLDAKRLAVLQPFRRPLPWSVVVALTLVTTLVGGLQFYLSQVRHLREHAGDTLAAVVQ 66 Query: 245 MVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHF 304 +A + + + P+L L A + + Sbjct: 67 AKFQHVAHWRAERLADAEQVAGNAPFLAAAAAWLVAGQQDAASTQRMLAQMQSCREMGRY 126 Query: 305 RNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTW--PEDLNKDLQQ 362 RN + L+ G+ L ++ ++ Sbjct: 127 RNVL--------LLDVAGRIR----------------------LSLVPHTGDEAGGIYER 156 Query: 363 VEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQ 422 ++GE + Y +++ + ++ LV + F+ + + E Sbjct: 157 APLPVAGEGLQPLLGDWYLSQDETELRVDVSFPLVVYEANGERRFVGALVTVAE------ 210 Query: 423 VNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPE 482 L + ++ + + S ++ E P V+ Sbjct: 211 AGDLLRTVLESLSQVKPEISLIGQRGNRLVSLNRDFLERGGEPSPPPKPLAEAALRVVYG 270 Query: 483 DRQHAEK---VIRDSLQSRSPFKLEFRITVKD-------GIRHIRALANRVLNKEGEVER 532 +R + D L +P + L +L G + Sbjct: 271 ERGMVMQEGDAGADLLSLGAPIPGSAWYVMAATSATQLPQENQSFLLGASLLGLLGALAA 330 Query: 533 LLGINMDMTEVKQLNEALFQEK------ERLHITLDSIGEAVVCIDMAMKITFMNPVAEK 586 + + +E + AL EK R + +A++ D +I +N A Sbjct: 331 AVALLARSSERHHMQAALEAEKERADLSRRFEYFVRYANDAILLADRDHRIVDVNDRALD 390 Query: 587 MSGWTQEEALGVPLLTVLHIT--FGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDV 644 + G+++EE G+ L V+ ++G L E + + V + G V Sbjct: 391 LYGYSREELAGMTLADVVAGDVEGVEHGRLDEALAR---GGGVW--ESVHTRKDGVPVPV 445 Query: 645 HYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYS 681 S+ +S + +++DVTE +++ L+ Sbjct: 446 ELSVRSISVEGSDFVQ--AIVRDVTERKRIELALARQ 480 Score = 69.3 bits (169), Expect = 8e-10, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 54/158 (34%), Gaps = 4/158 (2%) Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPN 471 + E+ L R I + I + R +LY Sbjct: 342 HHMQAALEAEKERADLSRRFEYFVRYANDAILLADRDHRIVDVNDRALDLYGYSREELAG 401 Query: 472 WQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVE 531 + V+ D + E D +R E T KDG+ L+ R ++ EG + Sbjct: 402 MTL--ADVVAGDVEGVEHGRLDEALARGGGVWESVHTRKDGVPVPVELSVRSISVEGS-D 458 Query: 532 RLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVV 569 + I D+TE K++ AL ++K L + +V Sbjct: 459 FVQAIVRDVTERKRIELALARQKNLY-SLLAQTNQIIV 495 >UniRef50_A0LA87 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LA87_MAGSM Length = 1070 Score = 883 bits (2282), Expect = 0.0, Method: Composition-based stats. Identities = 177/903 (19%), Positives = 348/903 (38%), Gaps = 28/903 (3%) Query: 211 YLPWPFTFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPR--TYLMSHM 268 Y PF + SA+ L + T + L+ R ++ Sbjct: 159 YQDHPFAQALRGESGSAIALDLNGEMALMGFTAVPDLGWGVVVHYRLSYQRKPFLRIAWG 218 Query: 269 PWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTN 328 L L+++ + M + + + AM S IG+ ++ + Sbjct: 219 LLLGSALVVVFGGWLFMQVGGPLIS--GLERYQARLGLAMAASRIGIWEWDVVTGKVEWD 276 Query: 329 KALCQFLGYSQEELRGL--TFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGD 386 + + Q + G F L ED + Q ++ ++ E + +E R G Sbjct: 277 EGMHQIFDLPKGAFDGTWEGFLALFDGEDSARLEQCRQESLT-EQLRFELECRTQPVAGV 335 Query: 387 VVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWE 446 L L G + I DI+E K+ E + + A G+G W W Sbjct: 336 QKTLSLRGELRMPEHGVEAHLIGACWDISEQKQAELKLLESRHHLDRAQRLAGLGYWSWN 395 Query: 447 LKPNIFSWDKRMFELYEIPP-HIKPNWQVWYECVLPEDRQHAEKVIRDSL-QSRSPFKLE 504 L+ + W + ++ + P H+ +++ + + V P+DRQ ++ L + F++E Sbjct: 396 LQGDEQFWSEEIYRMLHRPRAHVSASFESYMDHVHPDDRQRVRDMVARVLKEPDLFFRVE 455 Query: 505 FRITVKDG-IRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDS 563 RI DG +R + L + + GE R+ G D+T++K+ E L + LD+ Sbjct: 456 HRIVRSDGNVRTVLQLGDVERSASGEPVRMTGTVQDITDLKRTQENL----DLAKYILDT 511 Query: 564 IGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADT 623 +AV+ D+ +I +N K++G++++E +G V + I+ + Sbjct: 512 TSDAVIITDVNNRIIDVNHAYTKITGFSRDEVMGQNPQVVHNE--EQGEAFYSRIWQSLL 569 Query: 624 SRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSAS 683 +V ++G Y ++ + G V V D++ + Q+ A Sbjct: 570 QEGRWSGEVWERRKNGELYPKWMTMRRMLNQYGETAFFVGVFVDISTQKATEEQMERLAY 629 Query: 684 HDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLREL 743 +D LT L NRA F ++L + T + +V +DL+RFK +N+S G+ GD LL ++ Sbjct: 630 YDPLTKLPNRALFHERLTQSITTAKRYKRHVGVVMLDLNRFKLINESYGYGVGDGLLIQV 689 Query: 744 ASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE-SARFIATRIISAVNDYHFIWEGRVHRV 802 A ++ LR SD++AR+G D F + L D E +A ++ F+ G + Sbjct: 690 AERIVERLRESDIVARIGADTFAITLVDLKQEGEITGVANNLLKQFV-MPFLVNGHELML 748 Query: 803 GASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQ 862 + GI L + A ++ + A +K G Y + + ++R A+ + Sbjct: 749 RTAMGIVLYPTDGQDAETLLRHVENALGQAKQQGVNNYRFYSEEMSNISNKRLALEQEM- 807 Query: 863 WRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSC-EGEIIDEQTFRRSFSDPALSHA 921 +++ ++ + + + SL W + +I F + L Sbjct: 808 HTALEQRDFVLYYQPKVNLQR--GVVSGVESLIRWQHKQKGMISPVEFIPVAEETGLIVP 865 Query: 922 LDRRVFHEFFQQAAK--AVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHL 979 + + +A + + ++++ LS S L+ + E L NS + P +L Sbjct: 866 MGLWILETACAEAKRITDYLGQPFTVAVNLSARQFQSRNLLESISETLNNSAIDPSMLEF 925 Query: 980 IIPAEAILDHA----ESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCAN 1035 I ++ + E++ +R G + + G + LK + L +D + Sbjct: 926 EITESMMMGNVEKSIETLVAIRNMGVTLAIDDFGTGYSSLSYLKRFPINTLKIDQSFIRD 985 Query: 1036 VQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDL 1095 + + D +++ I AQ L + +A + L G + + G + P Sbjct: 986 LGVDSDDAAIVSAIISMAQDLNLHVVAEGAEKAEQVLFLKERGCETVQGYYFSRPLPQTD 1045 Query: 1096 LVN 1098 L Sbjct: 1046 LER 1048 >UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A14_DECAR Length = 827 Score = 883 bits (2282), Expect = 0.0, Method: Composition-based stats. Identities = 161/827 (19%), Positives = 313/827 (37%), Gaps = 52/827 (6%) Query: 299 ESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELR-GLTFQQLTW-PEDL 356 + + + G+++ + + N+ L E + G+ F +L P Sbjct: 16 RQLAYLQAVVSNMPQGISVFDEQLRLRVWNQGFINVLNLPPEIVYEGVHFSELVRVPAQR 75 Query: 357 NKD-----LQQVEK--LISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIA 409 + VE+ ++ + +S E+ NG+ + D + FI Sbjct: 76 GEYGPGEPEAHVERITALANKFEAHSFERT--RPNGNTHLVQ--GEPLF-IDQQLVGFIT 130 Query: 410 QIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELY------- 462 DI + K E + ++ E+ + ++ N+ ++ L Sbjct: 131 TYTDITDRKAAETALRTQHNQLQTVIESIPSAVSLFDSAGNLVLFNTAFPRLLDVPAELA 190 Query: 463 --EIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA 520 + + P D + + + ++ S E R +R Sbjct: 191 KPGVSMETLFRFNAMRGEYGPGDPEKIVATLMERAKNPSHHYFE-RTRPNGKTLEVRG-- 247 Query: 521 NRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFM 580 V EG + + D++E + A + ++ ++ D +I + Sbjct: 248 --VPLAEG---GFVTVYTDISERR----ASAEREQLAQKVYSHTPAGIIFTDDQHRILSI 298 Query: 581 NPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGG 640 NP +M+G+ E +G + ++ + G + ++ + R + ++ + ++G Sbjct: 299 NPATTEMTGYEPFELIGQTVFGLISLDEGISQ---KDFQEQISMRGSWSSELEVTQKNGS 355 Query: 641 SYDVHYSITPLSTLD-GSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQ 699 ++ I + G V ++ D+TE ++ ++ + A HDALT L NR + + Sbjct: 356 NFPAGARINRVDDPQSGLPAHYVWILADITERKQAEDRMRHIAQHDALTGLPNRLALLMR 415 Query: 700 LRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLAR 759 L LL A++FIDLDRFK +ND+ GH GD +LRE+A + ++LR +D +AR Sbjct: 416 LAQLLPEARRHGWTVAVMFIDLDRFKIINDTLGHQVGDEMLREVACRLSNLLRETDFVAR 475 Query: 760 LGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQA 818 LGGDEF ++LP + A ++ +IISA++ EG S GI++ D+ Sbjct: 476 LGGDEFVIILPSISSPADAAIVSGKIISALSTA-IEAEGHELHTSPSIGISIFPDDGPDG 534 Query: 819 AEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGV 878 V+ AD A Y +K GR + +ER + + I N+L ++ Sbjct: 535 DIVLKNADTAMYHAKAAGRNNYQFFAADMNRTAAERLNIERKLR-HAIARNELSLVFQPQ 593 Query: 879 ASPRIPEARNLWLISLKLWSCEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA 937 R + + +L W +I F + + + V + A+ Sbjct: 594 --FRAEDTTPTGVEALLRWHHPTDGMISPARFIPVAEETGMIVEIGDWVLATACHEMARW 651 Query: 938 --VASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES--- 992 K + I++ +S L + L S LP LL L I +++++ + Sbjct: 652 INAGLKPLRIAVNVSARQLRRRDFCETVANALTTSGLPAELLELEITESSVMENPQEAIH 711 Query: 993 -VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQG 1051 +++L G + + G LK D+L +D A+++ +L D + Sbjct: 712 ILERLGRMGVTLAIDDFGTGYSSLAYLKLFPIDHLKIDRSFVADIEHDLNDRAIAFGTIA 771 Query: 1052 HAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQP-LDLLV 1097 A LG+ IA V + L G D + G + + Sbjct: 772 LAHSLGLNVIAEGVETEDQHELLRANGCDEVQGFLFSKPLTGAAAFA 818 Score = 112 bits (281), Expect = 8e-23, Method: Composition-based stats. Identities = 42/282 (14%), Positives = 88/282 (31%), Gaps = 28/282 (9%) Query: 286 VMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELR-G 344 + +A + + +E ++L + G + N A + L E + G Sbjct: 134 DITDRKAAETALRTQHNQLQTVIESIPSAVSLFDSAGNLVLFNTAFPRLLDVPAELAKPG 193 Query: 345 LTFQQLTW---------PEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVS 395 ++ + L P D K + + + + Y NG + Sbjct: 194 VSMETLFRFNAMRGEYGPGDPEKIVATLMERAKNPSHHY---FERTRPNGKT--LEVRGV 248 Query: 396 LVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWD 455 + F+ DI+E + + + + GI + + I S + Sbjct: 249 PLAEG-----GFVTVYTDISERRAS----AEREQLAQKVYSHTPAGIIFTDDQHRILSIN 299 Query: 456 KRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRH 515 E+ P V+ L D ++K ++ + R + E +T K+G Sbjct: 300 PATTEMTGYEPFELIGQTVFGLISL--DEGISQKDFQEQISMRGSWSSELEVTQKNGSNF 357 Query: 516 IRALANRVLNKE--GEVERLLGINMDMTEVKQLNEALFQEKE 555 ++ G + I D+TE KQ + + + Sbjct: 358 PAGARINRVDDPQSGLPAHYVWILADITERKQAEDRMRHIAQ 399 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 58/153 (37%), Gaps = 3/153 (1%) Query: 293 ERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTW 352 ER+ +E E + ++ G+ + + L N A + GY EL G T L Sbjct: 264 ERRASAEREQLAQKVYSHTPAGIIFTDDQHRILSINPATTEMTGYEPFELIGQTVFGLIS 323 Query: 353 PEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTD-GTPLYFIAQI 411 ++ E++ ++S E +NG A ++ V G P +++ + Sbjct: 324 LDEGISQKDFQEQI--SMRGSWSSELEVTQKNGSNFPAGARINRVDDPQSGLPAHYVWIL 381 Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWE 444 DI E K+ E + + + L + + Sbjct: 382 ADITERKQAEDRMRHIAQHDALTGLPNRLALLM 414 >UniRef50_A8FY98 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FY98_SHESH Length = 951 Score = 882 bits (2279), Expect = 0.0, Method: Composition-based stats. Identities = 163/938 (17%), Positives = 337/938 (35%), Gaps = 28/938 (2%) Query: 177 FKPHYLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAF 236 FK + + L+ ++ + + + + T ++++L A R + Sbjct: 4 FKLITPISYWVLATLWVVIIGVYLLKLRQLRAEGAVSRTVTVLLIILAIDAFRTIVESVY 63 Query: 237 LIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPA--NIMTMVMYAFRAER 294 + + + L + + +L++L + ++ + Sbjct: 64 FGLYFNSLYGLIPKSIADLLSQPALLIIPKLINIFAGVLVILLLIKRWVPRDIHERKEAL 123 Query: 295 KHISES-------ETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTF 347 + + E F + + + N+ +GY +EL G T Sbjct: 124 LALHAAKSASVNNENLFNSIFNGVTDACIFADSNRNIVSINQGFELMMGYGIDELEGKTA 183 Query: 348 QQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYF 407 + ++ + ++ ++ + E Y +++G ++ + ++R D L + Sbjct: 184 SIIYESDEEYERQGRIHFNLAAKEKVTPYEANYRHKDGSIIVGETSRIVIRTLDDQILGY 243 Query: 408 IAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPH 467 + I D+ + K+ Q+ ++ + +G W+ N W+K +++ P Sbjct: 244 VGFIRDVTDRKKATTALQESTAMLSHHVQNTPLGCISWDSNLNCIEWNKSAEKIFGYSPD 303 Query: 468 IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRS-PFKLEFRITVKDGIRHIRALANRVLNK 526 + V E R + + + IT + ++ Sbjct: 304 EVIGHALLEILVSEEIRDDINNIGKILFKGNKCTRSSNENITKDGRTIICEWYSTPIVGV 363 Query: 527 EGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEK 586 GEV + + +D+TE KQ L + + + D + I +N Sbjct: 364 NGEVIGVTSLILDITESKQAELKL----KHAASVFTHTNQGITITDTSGVIIEVNDAFSA 419 Query: 587 MSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHY 646 ++G+ ++E +G + + + +++ + ++ ++ Y Sbjct: 420 ITGYARDEVIGQNPRVLQ--SGRHSPEFYREMWATLQADGHWTGEIWNKRKNDEIYPEML 477 Query: 647 SITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQT 706 +I+ + G V + D+T ++ QL A +D LT+L NR +L + Sbjct: 478 TISAVLDATGKVQNYVALFNDITAIKEHQEQLERIAHYDTLTNLPNRTLLADRLTQSMVQ 537 Query: 707 VNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFG 766 V A+VF+DLD+FK VND+ GH GD LL ++ + LR D LAR+GGDEF Sbjct: 538 VRRRKSSLAVVFLDLDKFKDVNDAYGHDVGDKLLIVISRRLKEALRDIDTLARIGGDEFV 597 Query: 767 LLLPDCNV-ESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQA 825 +L D E + R++ A EG + +V AS G+ + + A +++ A Sbjct: 598 AVLMDIEKGEDCEPVLERLLEA-ASGSVTVEGIMLKVSASMGVAIYPQDGIDADQLLRHA 656 Query: 826 DIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPE 885 D A Y +K+ G+ +++ Q A R L + + +++ ++ + R Sbjct: 657 DQAMYVAKHEGKNCYHLFDTAQNIAMQIRHD-DLQSMRKALDQSEFVLYYQPKVNMR--T 713 Query: 886 ARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK-GI 943 + +L W S E ++ F + + +S + V Q A I Sbjct: 714 GAIIGAEALIRWLSPERGLVGPNEFLPAIENHVISIEVGEWVIDTALGQIAAWQELGLDI 773 Query: 944 SISLPLSVAGLSSATLVNDLLEQLENSP-LPPRLLHLIIPAEAILDHA----ESVQKLRL 998 +S+ +S L V L LE P + P L + + +++D ++ Sbjct: 774 PVSVNVSALQLQHDGFVTCLAALLEAHPEVAPSSLEIEVLETSLIDDVMQVSATMLACIE 833 Query: 999 AGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGM 1058 G L G L+ A + +D ++ D ++ + A+ Sbjct: 834 LGVTFALDDFGTGYSSLTYLRRLPASLIKIDQTFVLDMLTTPDDLAIVEGVVSLAKSFKH 893 Query: 1059 KTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 K IA V TL G +L G IA + Sbjct: 894 KVIAEGVETIAHGTTLLQTGCELAQGYGIARPMMAKDI 931 >UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=3 Tax=Polaromonas RepID=Q12GF0_POLSJ Length = 989 Score = 880 bits (2275), Expect = 0.0, Method: Composition-based stats. Identities = 183/897 (20%), Positives = 342/897 (38%), Gaps = 58/897 (6%) Query: 235 AFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAF---- 290 A L F V +++ L L L IL + + + Sbjct: 107 AGLRFFAAVPLIASDGTPLGVLAVMDAAARACRDGDLDALNILGRQVVAQLDLRRQHKFL 166 Query: 291 --------RAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEEL 342 + R + SE AM + +G + L + LG S Sbjct: 167 ADRSAEREQQSRMRLQHSENRLHIAMRTAQMGNWSLNLADDSLTLSSEFPAILGTSAA-- 224 Query: 343 RGLTFQQLT---WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRH 399 T ++L E + + + + + + E + W + +VR Sbjct: 225 MPQTLEELLLHYAAESRGRLRHVISEC-ARKGTPFDEEAQMLTAQDGRRWVRIIGEVVRD 283 Query: 400 TDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMF 459 G ++DIN K+ ++ +L R+T + + + ++ Sbjct: 284 GQGAITRIQGALQDINARKQAQEETLRLAMRLTTTLASITEAFVTLDREGRFTYLNQESE 343 Query: 460 ELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRAL 519 L + ++W + E + I+ +L + + E+ + Sbjct: 344 RLLQRSTAELLGQEIWQDF-GEEVSGRLRQHIQRALATNRQVEFEYFDAPLGK--WLEVR 400 Query: 520 ANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMK--- 576 A E L D++E + E L + + + VV ++ + Sbjct: 401 AYPF------AEGLAVYFRDVSERRNSQEQLMLLETGIARL----NDIVVIVEASPHHGS 450 Query: 577 ---ITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVV 633 I F+N E+ +G+T++E L + + + I+SA ++V Sbjct: 451 GPQIVFVNDAFERHTGYTRDEVLSRMPGMLQGPGTRQDE--LARIFSALQQWKQARGELV 508 Query: 634 LHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANR 693 ++ + GGS+ V I ++ +G V V +D+T+ + ++ + A +D LT L NR Sbjct: 509 IYRKDGGSFWVDLEIVSVAAQNGDLTHWVAVGRDITQRKAADEKIHHLAFYDPLTELPNR 568 Query: 694 ASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRS 753 +L L T Q L+FIDLD FK +ND+ GH+ GD LL+++A + +R Sbjct: 569 QLLLDRLEQALADCTITRQEGVLMFIDLDNFKILNDTVGHSKGDLLLQKVAVRLKGCVRK 628 Query: 754 SDVLARLGGDEFGLLLPDCNVE------SARFIATRIISAVNDYHFIWEGRVHRVGASAG 807 D +ARLGGDEF ++L D + A+ +A ++++ + + + G H +S G Sbjct: 629 LDTVARLGGDEFVVMLQDLGTQPEAATRKAQIVAEKVLATLRE-PYDLAGYQHYSTSSIG 687 Query: 808 ITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIK 867 +T + +E++ QAD+A Y +K GR V ++P A+ S AA+S D + ++ Sbjct: 688 VTPFNARQGSVSELLKQADLAMYQAKTMGRNTVCFFDPDMQASVSANAALSTDLR-AGLR 746 Query: 868 ENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRV 926 E+Q ++ E R + +L W + ++ F + L L + V Sbjct: 747 EHQFLVHYQPQVD---REQRITGVEALLRWKHPQRGMVSPAEFIPVAEETGLILPLGQWV 803 Query: 927 FHEFFQQAAKAVASK---GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPA 983 + Q A G+SI++ +SV V+ ++ ++++ + P L L + Sbjct: 804 LEQACLQLAVWQKRPETAGLSIAVNVSVRQFRHPDFVDMVMAAIKHTGIQPHNLKLELTE 863 Query: 984 EAILDHAE----SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGN 1039 + D E + L+ G + L G + LK D L +D A+V + Sbjct: 864 SLLADRMEIAIAKMGTLKALGVTLALDDFGMGYSSLSYLKRLPLDQLKIDKSFIADVFSD 923 Query: 1040 LMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 D + + I AQ LG+ IA V L+G+G G + P+ Sbjct: 924 PNDAAICSAIISLAQSLGLDVIAEGVETEAQRSFLAGLGCGYYQGFLFCPPLPIAEF 980 >UniRef50_B6BGA2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGA2_9PROT Length = 802 Score = 879 bits (2271), Expect = 0.0, Method: Composition-based stats. Identities = 158/800 (19%), Positives = 309/800 (38%), Gaps = 22/800 (2%) Query: 306 NAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEK 365 + + + +L N + +G + G E K Sbjct: 9 LILNSLEQNIFVKDLNSNYLFVNSTYAKLVGKEATAIIGKNDLDFFPEEIAFKYQNDDSL 68 Query: 366 LISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQ 425 +I + ++E +G + +G + DI E ++ + Sbjct: 69 VIKNKQIIDTVESILI--DGKYKTIRTVKKPLYF-NGEVSAVLGIFWDITEFNEEKEHFK 125 Query: 426 QLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI-PPHIKPNWQVWYECVLPEDR 484 +L ++ A E IG WE L N W ++ ++ + P ++ + E + P+D Sbjct: 126 KLEYGLSKAQELANIGHWELNLVTNDLFWSDEVYRIFGLKPQEFGATYEAFLEHIHPDDV 185 Query: 485 QHAEKVIRDSLQSRSPFKLEFRITVKDGIR-HIRALANRVLNKEGEVERLLGINMDMTEV 543 + DS+ +R + + RI K+G + + +G V R +G D+T+ Sbjct: 186 ELVNSSYSDSITNRCGYHVTHRIVRKNGEVGFVEERCEHEFDNDGNVLRSIGTVHDITKQ 245 Query: 544 KQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTV 603 K L + + VV D I +N K++G+T EE +G+ Sbjct: 246 KIAQNELM----LASEVFSKMSDGVVITDANQSIIKINESFTKITGYTNEELIGMTPKAF 301 Query: 604 LHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVL 663 + + + ++ +++ +S Y +I L DG + Sbjct: 302 --SSGWHDEAFYKKMWDDIKQNGQWSGEIIDRKKSSERYIAEMNIIALHNDDGILTNYIS 359 Query: 664 VIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDR 723 + D+++ ++ + + A D+LT L NR FE+++ + ++ AL+FID+D Sbjct: 360 ITNDISKKKEQEKLIHNLAYFDSLTDLPNRVLFEERVVSRIPFSKRHDKKMALLFIDMDN 419 Query: 724 FKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARFIAT 782 FK VND+ GH GD L E+++++ + +R D LARLGGDEF +LL D ++ IA Sbjct: 420 FKNVNDTLGHFMGDMFLIEVSNIIKNSIREQDTLARLGGDEFTVLLEDINSIMDIVPIAE 479 Query: 783 RIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTV 842 +II+A N + E + G S GI+L D+ E+ AD A Y K G+ Sbjct: 480 KIIAAFN-NPVLIESKELYTGISMGISLYPDDGKSYNELFKAADTAMYQVKASGKNNFQF 538 Query: 843 YEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEG 901 ++ +ER + + I N+L ++ + + R + +L W E Sbjct: 539 FKQSMNEKITERLFLENSLR-NAIGNNELFLVYQPKIN--LETKRVYGMEALIRWRHPEI 595 Query: 902 EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKG-ISISLPLSVAGLSSATLV 960 +I F + + + V + + +++S+ +S L + + Sbjct: 596 GLIRPDKFISISEETGQIYNIGLWVAKQAIIDTKALHEAGHILTVSINVSSKQLENEKFI 655 Query: 961 NDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFN 1016 +D+ + + + L I I+ + + + +L G ++ + G + Sbjct: 656 DDICCVVNEIGIDKSYVELEITESHIMSNIDKALKILNELSDKGFKLSIDDFGTGYSSLS 715 Query: 1017 SLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSG 1076 LK A + +D ++ + D ++ I A+ LG IA +DTL Sbjct: 716 YLKKLPAQTIKIDRSFVLDIYKDEDDRSIVATIIAMAKALGKDVIAEGSETQEHIDTLKY 775 Query: 1077 IGVDLIYGEVIADAQPLDLL 1096 + + + G + +D Sbjct: 776 LHCNKVQGYFFSKPIEIDEF 795 Score = 125 bits (316), Expect = 7e-27, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 100/317 (31%), Gaps = 26/317 (8%) Query: 277 LLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLG 336 + + + F E++H + E A E + IG + L + + + G Sbjct: 104 VSAVLGIFWDITEFNEEKEHFKKLEYGLSKAQELANIGHWELNLVTNDLFWSDEVYRIFG 163 Query: 337 YSQEELRGLT---FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLA 393 +E G T F + P+D+ I+ Y + R +NG+V + Sbjct: 164 LKPQEF-GATYEAFLEHIHPDDVELVNSSYSDSITNRCG-YHVTHRIVRKNGEVGFVEER 221 Query: 394 VSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFS 453 DG L I + DI + K + E G+ + +I Sbjct: 222 CEHEFDNDGNVLRSIGTVHDITKQKIAQNELMLASE----VFSKMSDGVVITDANQSIIK 277 Query: 454 WDKRMFELYEIPPHIKPNWQV--WYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD 511 ++ ++ + E K + D ++ + E K Sbjct: 278 INESFTKITGYTNEELIGMTPKAFSSGWHDE---AFYKKMWDDIKQNGQWSGEIIDRKKS 334 Query: 512 GIRHI-RALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVC 570 R+I + N +G + + I D+++ K+ + + DS Sbjct: 335 SERYIAEMNIIALHNDDGILTNYISITNDISKKKEQEKLIHNL-----AYFDS------L 383 Query: 571 IDMAMKITFMNPVAEKM 587 D+ ++ F V ++ Sbjct: 384 TDLPNRVLFEERVVSRI 400 >UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K2Z8_DESAC Length = 1288 Score = 878 bits (2270), Expect = 0.0, Method: Composition-based stats. Identities = 161/875 (18%), Positives = 310/875 (35%), Gaps = 73/875 (8%) Query: 290 FRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGY--SQEELRGLTF 347 + E+ ++ + + E ++ TNK+ C+ L S + G Sbjct: 413 LHIASERHQETARLLQHICDNVPDLIWAKDIEHHYIFTNKSNCRTLLCVDSTDIAIGKNH 472 Query: 348 QQLT------WPED------LNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVS 395 + + +PED Q +++ + E + G ++ + + Sbjct: 473 EFFSDKILKEFPEDPLAYQFSELCCQSDSEVLRTRQSMRFQEVG--HVKGTLICLDVYKA 530 Query: 396 LVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGI----------WEW 445 DG + + I K+ EQ +L + + + + Sbjct: 531 PFYGADGELIGTVGSARIITREKQLEQETMRLSRLYRILSAVNQHIVHKPQPIELFQFVC 590 Query: 446 ELKPNIFSWDKRM-------------------FELYEIPPHIKPNWQVWYEC---VLPED 483 + ++ E+ P H N + E Sbjct: 591 DTLLEDTTFAMAWIGLPNEMGVYKPVVSSGISLEVLGEPQHCIHNNGQLNHLTTNITAES 650 Query: 484 RQHAEKVIRDSLQSRSPFKLEFRI-----TVKDGIRHIRALANRVLNKEGEVERL----- 533 Q L RSPF+ + + ++L ++ E + L Sbjct: 651 AQEVLCPTGYRLYQRSPFQAVASFPIQPKQAAGALLVVYTQDKKLLEQDDEQQLLDELVQ 710 Query: 534 -LGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQ 592 + +D+ E +Q ++ + D+ E +V D KI +N ++G+ Sbjct: 711 DVAFALDVHEHEQQQAFSMKQLQLAATVFDNSREGIVLTDKNEKIVSVNRAFSDITGYRD 770 Query: 593 EEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLS 652 +E LG + + +N++ + ++ + G Y S++ + Sbjct: 771 DEVLGQTPRILK--SNRHGRDFYQNMWHCLAEHGCWQGEIWNRRKDGQVYPELMSMSAVC 828 Query: 653 TLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQ 712 + V D++++++ +L Y + HD LT L NR+ F L ++ H Sbjct: 829 DDQQEVSHYIAVFTDISQAKESQEKLDYLSWHDPLTDLPNRSLFCTHLDQAVKHAERKHH 888 Query: 713 RHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC 772 A++ DLD FK VNDS GH GDALLR++A + S LR SD+LARLGGDEF LLL D Sbjct: 889 SFAVLCFDLDHFKDVNDSFGHLVGDALLRKIADRLRSCLRESDMLARLGGDEFVLLLEDV 948 Query: 773 -NVESARFIATRIISAVNDYHFIWE-GRVHRVGASAGITLIDDNNHQAAEVMSQADIACY 830 + +A I+ + + E +V S GI + ++ A E++ +AD A Y Sbjct: 949 ADSHRVTMMAEEILHQLQQPICLTETDLEVQVSVSVGIAVYPEHGRDALELLQRADSALY 1008 Query: 831 ASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLW 890 +K GR R Y + ER +S + + +++ + + + + + Sbjct: 1009 RAKQHGRARFAYYNEEMTEQAQERVQLSFHLR-QALEKKEFAVYYQPQVD--LGTGQIVG 1065 Query: 891 LISLKLWS-CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA--VASKGISISL 947 +L W+ E ++ F + ++ + + +Q +++++ Sbjct: 1066 AEALMRWNSPELGLVTPDRFIPLAEEIGCICSMGTWILRQVCEQGKAWLDAGYPPLTLAV 1125 Query: 948 PLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILD----HAESVQKLRLAGCRI 1003 LS + + L E L+ + P L L + ++ + ++ L G R+ Sbjct: 1126 NLSAVQFAEEDIACRLKETLQETGYPAEYLELEVTESTLMHKEQQTIDLLKSLNELGVRL 1185 Query: 1004 VLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAG 1063 L G LK L +D ++ + D ++T I LG +A Sbjct: 1186 ALDDFGTGYSSLAYLKYFPLHLLKVDKSFIDDLPADANDCKMVTAIVQMGHGLGFDLLAE 1245 Query: 1064 PVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 V D L+ +G D G + P Sbjct: 1246 GVETVAQRDCLAQLGCDYYQGYYCSPPVPACEFAA 1280 >UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V1I4_9PROT Length = 935 Score = 878 bits (2269), Expect = 0.0, Method: Composition-based stats. Identities = 137/632 (21%), Positives = 254/632 (40%), Gaps = 24/632 (3%) Query: 474 VWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERL 533 W ++ +I + + LE+ + + G + L+ + + + Sbjct: 314 AWLGWLMAGRIARPISLISQAADKVAGGDLEYELPARLGEGEVAHLSTAIHDM------V 367 Query: 534 LGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQE 593 + + ++ + K+ + L +S EA++ D I +N +++G+ + Sbjct: 368 VNLTHEIKQRKEAEQGL----RLSAKVFESNTEAIMITDAEQNIVMVNQAFTQITGYGAD 423 Query: 594 EALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLST 653 E LG + + E + A + ++ ++G + +I+ L Sbjct: 424 EVLGQRPKLL--SSGRHGPEFYEAFWHALRANDLWRGEIWNKRKNGEIFPEWVTISALRD 481 Query: 654 LDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQR 713 V V D+TE +K +++Y A++D LT L NR ++ + + + Sbjct: 482 ETSQISHYVAVFLDITERKKEEERINYLANYDVLTGLPNRYLLSDRIEQAFSSAQRNNFK 541 Query: 714 HALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN 773 A++FIDLD FK +NDS GH GDALL+ +A+ + + LR SD +ARLGGDEF LL + + Sbjct: 542 VAVLFIDLDYFKNINDSLGHDIGDALLKLVAARLKTCLRRSDTIARLGGDEFVALLSELD 601 Query: 774 -VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYAS 832 E F+A ++I ++ + F + S GI + D+ + E++ AD+A Y + Sbjct: 602 SSEEVIFVAEKMIESLTEK-FTLGEYQLSITPSIGICIYPDDGETSVELLRNADLAMYQA 660 Query: 833 KNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLI 892 K+ GR Y P ER + + I + QL + S + + Sbjct: 661 KDDGRNNFKFYSPDMNRKALERLKLETFLRV-AIVQQQLSVYYQPKVSVL--SGKMTGME 717 Query: 893 SLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKG--ISISLPL 949 +L W E I F + L + + V + QA A + I++ L Sbjct: 718 ALLRWQHPELGFISPAVFIPIAEETGLINEIGDWVLRQSCLQARLWQAQGYDIVPIAVNL 777 Query: 950 SVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVL 1005 S L ++ L + L L L I ++ ES +++LR G R+ L Sbjct: 778 SARQLKQDNFAARVVTILREAGLDAHYLVLEITESMLMSTGESGLQILEQLRDDGVRLAL 837 Query: 1006 SQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPV 1065 G + LK D L +D ++ + D +++ A L +K A V Sbjct: 838 DDFGTGYSSLSRLKNLPLDSLKIDQSFVRDIVTDPNDASIVSATAVLAHALNLKVTAEGV 897 Query: 1066 VLPLVMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 +D + + + G + + P +V Sbjct: 898 ETQEQLDFIRMLNCEEYQGYLFSRPIPASEVV 929 Score = 143 bits (362), Expect = 4e-32, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 73/231 (31%), Gaps = 17/231 (7%) Query: 228 VRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPF------LLILLPAN 281 R + +L+ ++ + + +A P + + + L L Sbjct: 295 ARQLQQHIWLVGAALGLLFAWLGWLMAGRIARPISLISQAADKVAGGDLEYELPARLGEG 354 Query: 282 IMTMVMYAFR----------AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKAL 331 + + A +RK + E + + + E + N+A Sbjct: 355 EVAHLSTAIHDMVVNLTHEIKQRKEAEQGLRLSAKVFESNTEAIMITDAEQNIVMVNQAF 414 Query: 332 CQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWAL 391 Q GY +E+ G + L+ + + + + + E +NG++ Sbjct: 415 TQITGYGADEVLGQRPKLLSSGRHGPEFYEAFWHALRAN-DLWRGEIWNKRKNGEIFPEW 473 Query: 392 LAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGI 442 + +S +R +++A DI E K+ E+ L L + Sbjct: 474 VTISALRDETSQISHYVAVFLDITERKKEEERINYLANYDVLTGLPNRYLL 524 >UniRef50_Q31EA2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Piscirickettsiaceae RepID=Q31EA2_THICR Length = 1289 Score = 877 bits (2267), Expect = 0.0, Method: Composition-based stats. Identities = 173/841 (20%), Positives = 326/841 (38%), Gaps = 40/841 (4%) Query: 277 LLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLG 336 ++ + + A + K + E + + S IG E + ++ C LG Sbjct: 451 VVSFLFLARDVTARVQQSKELVEKDERLELILSASKIGQWDWDIESNVMLWDERSCTMLG 510 Query: 337 YSQEELR--GLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAV 394 Y E + + L P+D +++++ + + YS+E R + + D VW Sbjct: 511 YPPEAFKMDYDKWASLLHPDD-AYVMKRLKAHLE-KGEAYSVEYRIRSGDDDWVWVESQG 568 Query: 395 SLV-RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFS 453 + G P+ + DI + KR+E + + ER+ E IGI + + I Sbjct: 569 QTIESDAKGRPIRMVGIYMDITDRKRSEDLLVENEERLRTIFEILPIGITLTDREGQIVE 628 Query: 454 WDKRMFELYEIPPHIKPN----------WQVWYECVLPEDRQHAEKVIRDSLQSRSPFKL 503 + L IP ++ + E+ + K Sbjct: 629 CNSASEVLLGIPREEHLARKYDAKEWTIYRADGTAMPSEEYAAVRSLTNQETIKNQVMK- 687 Query: 504 EFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDS 563 + + A + + ++ +D+++ +Q E L Sbjct: 688 ---VCHSGDCTWLNVSATPLNHPN---YGVVVTYIDISDKRQAEERLN----LAASVFTH 737 Query: 564 IGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADT 623 E ++ D +I +N +++G+ +EE LG+ + + + ++ Sbjct: 738 AREGIMITDKHARILDVNKGFTQITGYEREEVLGLNPNIL--NSGCQSKEFYNLMWKTLF 795 Query: 624 SRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSAS 683 ++ ++G Y +IT + DG + + D+T ++ RQL + A Sbjct: 796 EEGHWSGEIWNRNKNGTVYPQMITITAIKNSDGMTQNYLALFTDITSLKEQQRQLEHIAH 855 Query: 684 HDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLREL 743 +DALT L NR+ +L+ + + A++FIDLD FK VND GH AGD LL EL Sbjct: 856 YDALTQLPNRSLLADRLQQAIFASQRHNSLLAVLFIDLDGFKKVNDLHGHDAGDELLVEL 915 Query: 744 ASLMLSMLRSSDVLARLGGDEFGLLLPDCN-VESARFIATRIISAVNDYHFIWEGRVHRV 802 + M ++LR D LAR+GGDEF ++L + + I R++ + ++ EG V V Sbjct: 916 SKRMKNILREEDTLARIGGDEFIVVLVNLDAPSDCEMILRRLLESTSES-VDIEGEVVSV 974 Query: 803 GASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQ 862 AS G+T +N A +M AD A Y +K G+ R ++ Q + ++A+ + Sbjct: 975 SASIGVTFYPKDNVDADLLMRHADQAMYQAKQSGKNRYHYFDVQMDSMLQSQSAIQNE-I 1033 Query: 863 WRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHA 921 + + + + + + + + + +L W + ++ F + S Sbjct: 1034 QDALNKGEFELYYQPKVN--LAQNIVIGVEALIRWNHPKKGLLVPIEFLPFIENHPFSVE 1091 Query: 922 LDRRVFHEFFQQAAKAVASK-GISISLPLSVAGLSSATLVNDLLEQLEN-SPLPPRLLHL 979 LD+ V +Q ++ A +SIS+ +S L + L L S LP L + Sbjct: 1092 LDQWVMETALKQMSEWRAQSLEMSISVNVSAYFLQQKNFIQILERLLSQYSDLPKFSLEI 1151 Query: 980 IIPAEAILDHAESVQKL----RLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCAN 1035 + L++ ++ L R G L G L+ A + +D + Sbjct: 1152 EVLETTALENISNISDLVHICRDMGVNFALDDFGTGYSSLMYLRHLPARTIKIDKSFVRD 1211 Query: 1036 VQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDL 1095 + ++ D +I I A + IA V + L +G + + G IA P D Sbjct: 1212 MLVDMDDRAIIDGILKLASVFNREVIAEGVETVAHFEALLDMGCEQVQGYGIARPMPADQ 1271 Query: 1096 L 1096 + Sbjct: 1272 V 1272 Score = 226 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 80/409 (19%), Positives = 165/409 (40%), Gaps = 14/409 (3%) Query: 281 NIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQE 340 + + R ++ + E+ ++ + V EG L + A + L E Sbjct: 330 LGVAQDVTELRRSQQALIEARNQLEATLDTIPDLLFEVDKEGCILNFHTADIEKLYLKPE 389 Query: 341 ELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHT 400 + G ++ + Q + + + + +E +NG L+VS + Sbjct: 390 QFVGKRVNEVLPDSVGDVIFQAMAEALE-TGRSQGLEYSL-AQNGKQSCYELSVSTKINQ 447 Query: 401 DGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFE 460 + F+ D+ + + + ER+ L A IG W+W+++ N+ WD+R Sbjct: 448 KNEVVSFLFLARDVTARVQQSKELVEKDERLELILSASKIGQWDWDIESNVMLWDERSCT 507 Query: 461 LYEIPPH-IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRIT-VKDGIRHIRA 518 + PP K ++ W + P+D + K ++ L+ + +E+RI D + + Sbjct: 508 MLGYPPEAFKMDYDKWASLLHPDD-AYVMKRLKAHLEKGEAYSVEYRIRSGDDDWVWVES 566 Query: 519 LANRV-LNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKI 577 + + +G R++GI MD+T+ K+ + L + +ERL + + + D +I Sbjct: 567 QGQTIESDAKGRPIRMVGIYMDITDRKRSEDLLVENEERLRTIFEILPIGITLTDREGQI 626 Query: 578 TFMNPVAEKMSGWTQEEALGVPL----LTVLHITFGDNGPLMENIYSADTSRSAIEQDVV 633 N +E + G +EE L T+ + T++ I+ V+ Sbjct: 627 VECNSASEVLLGIPREEHLARKYDAKEWTIYRADGTAMPSEEYAAVRSLTNQETIKNQVM 686 Query: 634 LHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSA 682 C SG ++ S TPL+ + G V+ D+++ R+ +L+ A Sbjct: 687 KVCHSGDCTWLNVSATPLNHPN---YGVVVTYIDISDKRQAEERLN-LA 731 Score = 222 bits (566), Expect = 6e-56, Method: Composition-based stats. Identities = 69/436 (15%), Positives = 160/436 (36%), Gaps = 20/436 (4%) Query: 260 PRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAI-GMALV 318 S + L + + + + + + + T N M+ S + Sbjct: 167 ESQERQSLILVLAVFTQAILILFLFYDISRRKQLQAELKQVATTLTNIMDSSTEVAVIAT 226 Query: 319 GTEGQWLQTNKALCQFLGYSQEELRGL-TFQQLTWPEDLNKDLQQVEKLISGEINTYSM- 376 TEG + N + LGYS +EL G T + +++ Q++ + + + + + Sbjct: 227 DTEGVITEFNSGAEKLLGYSAQELVGKETPLKFHSEKEIQARAQRLSEALKRPVKGFQVF 286 Query: 377 ------------EKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVN 424 E Y ++G +V L V+ + + + ++ +D+ EL+R++Q Sbjct: 287 TEKLKEDSPQDHEWTYARKDGVLVPVSLIVTPILDENHQKVGYLGVAQDVTELRRSQQAL 346 Query: 425 QQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDR 484 + ++ + ++E + + I ++ E + P +V VLP+ Sbjct: 347 IEARNQLEATLDTIPDLLFEVDKEGCILNFHTADIEKLYLKPEQFVGKRVNE--VLPDSV 404 Query: 485 QHAE-KVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEV 543 + + ++L++ LE+ + + +N++ EV L + D+T Sbjct: 405 GDVIFQAMAEALETGRSQGLEYSLAQNGKQSCYELSVSTKINQKNEVVSFLFLARDVTAR 464 Query: 544 KQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTV 603 Q ++ L ++ ERL + L + D+ + + + M G+ EA + Sbjct: 465 VQQSKELVEKDERLELILSASKIGQWDWDIESNVMLWDERSCTMLGYPP-EAFKMDYDKW 523 Query: 604 LHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPL-STLDGSNIGSV 662 + D+ +M+ + + A + + V + S G I V Sbjct: 524 ASLLHPDDAYVMKRLKAHLEKGEAYSVEYRIRSGDDDWVWVESQGQTIESDAKGRPIRMV 583 Query: 663 LVIQDVTESRKMLRQL 678 + D+T+ ++ L Sbjct: 584 GIYMDITDRKRSEDLL 599 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 64/449 (14%), Positives = 155/449 (34%), Gaps = 82/449 (18%) Query: 304 FRNAMEYSAIGMALVGT-EGQWLQTNKALCQFLGYSQEELRGLTFQQL--TWPEDLNKDL 360 F E M ++ G+ ++ N+A F GYS++EL+ ++ Q L P+ ++ Sbjct: 31 FGEFFERQGAVMLIMDPVTGKIVRANRAAENFYGYSRDELKKMSIQDLNTLTPKQVS--- 87 Query: 361 QQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTP---------------- 404 +++ + N + R G + + + Sbjct: 88 KELALAREEKRNYFIFHHRL--AGGQTRQVAVHSIPYSFDNQSFLVSTIHELSSGSHQQQ 145 Query: 405 -----------------------------LYFIAQIE----------DINELKRTEQVNQ 425 + +A DI+ K+ + + Sbjct: 146 DLQHYQQNLEELLQLQETELKESQERQSLILVLAVFTQAILILFLFYDISRRKQLQAELK 205 Query: 426 QLMERITLANEAG-GIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLP-ED 483 Q+ +T ++ + + + + I ++ +L + + E Sbjct: 206 QVATTLTNIMDSSTEVAVIATDTEGVITEFNSGAEKLLGYSAQELVGKETPLKFHSEKEI 265 Query: 484 RQHAEKV-------------IRDSLQSRSPFKLEFRITVKDGIRH-IRALANRVLNKEGE 529 + A+++ + L+ SP E+ KDG+ + + +L++ + Sbjct: 266 QARAQRLSEALKRPVKGFQVFTEKLKEDSPQDHEWTYARKDGVLVPVSLIVTPILDENHQ 325 Query: 530 VERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSG 589 LG+ D+TE+++ +AL + + +L TLD+I + + +D I + + Sbjct: 326 KVGYLGVAQDVTELRRSQQALIEARNQLEATLDTIPDLLFEVDKEGCILNFHTADIEKLY 385 Query: 590 WTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSIT 649 E+ +G + VL + GD + + + A + + + L ++G S++ Sbjct: 386 LKPEQFVGKRVNEVLPDSVGD--VIFQAMAEALETGRSQGLEYSL-AQNGKQSCYELSVS 442 Query: 650 PLSTLDGSNIGSVLVIQDVTESRKMLRQL 678 + + + +DVT + ++L Sbjct: 443 TKINQKNEVVSFLFLARDVTARVQQSKEL 471 >UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9S8_MAGSM Length = 971 Score = 876 bits (2264), Expect = 0.0, Method: Composition-based stats. Identities = 158/719 (21%), Positives = 285/719 (39%), Gaps = 33/719 (4%) Query: 398 RHTDGTPLYFIAQIEDINE-----LKRTEQVNQQLMER---ITLANEAGGIGI--WEWEL 447 R G + D E+ +Q E+ + E + WE + Sbjct: 250 RSELGDLSQALRVFRDQFAINEGLRLEREESLKQAAEKREELARIIEISHTVVLSWENDE 309 Query: 448 KPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRI 507 + ++ + + + V V PED E ++ + KLEFR+ Sbjct: 310 EWSLSYVSENCYRIL----QSGLKSLVLKPLVNPEDLPQMEALLAAGGDASRWVKLEFRL 365 Query: 508 -TVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGE 566 + R + + EV + G+ D+TE ++ L + + E Sbjct: 366 CLGSEEPRWFECCVLPIKDDHAEVVQYHGVLHDITERRKGEHDL----RLAQVLFRTTNE 421 Query: 567 AVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRS 626 A++ KI +NP +++G+ +E LG + + + P ++ A Sbjct: 422 ALMISSRDNKIEMVNPAFSRITGYQLDEVLGKGPDLLQ--SGRHDAPFYTQMWHALQQDG 479 Query: 627 AIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDA 686 A E ++ +SG +Y SI ++ G + V D+T+ ++ + + A++D Sbjct: 480 AWEGEIWNRRKSGETYPEWLSIATVTNDKGETVQYVAAFSDITKRKQAEETILHQANYDF 539 Query: 687 LTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASL 746 LT L NR F +L+ L+ + Q+ AL+FIDLDRFK VND+ GH GD LLRE+A Sbjct: 540 LTDLPNRNLFHDRLQTELKRSQRSGQQVALLFIDLDRFKFVNDTLGHNVGDQLLREVAIR 599 Query: 747 MLSMLRSSDVLARLGGDEFGLLLPDCN-VESARFIATRIISAVNDYHFIWEGRVHRVGAS 805 + +R SD +ARLGGDEF ++LP+ + E +A +I + + + + + AS Sbjct: 600 LGHCVRESDTIARLGGDEFTVILPELHGPEGVARLAQGMIDKLEE-RYCIQDHELFISAS 658 Query: 806 AGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRM 865 GIT+ ++ +++ AD+A Y +K GRG Y + A + + + Sbjct: 659 IGITIYPEDADNMMDLVKNADVAMYRAKENGRGSFCFYTAEMNADARQLHKIEQALRV-A 717 Query: 866 IKENQLMMLAHGVASPRIPEARNLWLISLKLWS-CEGEIIDEQTFRRSFSDPALSHALDR 924 ++E Q + + +L W GEI+ F + L + Sbjct: 718 LEEGQFWIHYQPYVQQ--SSGLITGVEALIRWRNSAGEIVYPDQFIPVAEETGLIVPIGL 775 Query: 925 RVFHEFFQQAAKAV--ASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIP 982 V A+ I+ S+ +S LV + L+ + + P+ L L I Sbjct: 776 WVLRSVIGVIAQWQREGHPDITFSVNVSARQFQEGHLVGQIKAALQENQINPQSLMLEIT 835 Query: 983 AEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQG 1038 ++ E +++++ G R+ L G LK D L +D + Sbjct: 836 ESLMIRDPEHTLNMLKEIKALGVRVALDDFGTGYSSLGYLKQFPIDLLKIDRSFINGIAN 895 Query: 1039 NLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 + DE +++ I A LG+ I + + ++ D + G + P D L Sbjct: 896 SQDDETMVSAIVSMAHSLGVGVIGEGIENDQQLQRVNLHACDYVQGFFYSRPMPYDELA 954 Score = 135 bits (341), Expect = 1e-29, Method: Composition-based stats. Identities = 40/360 (11%), Positives = 98/360 (27%), Gaps = 28/360 (7%) Query: 275 LILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQF 334 ++ + + + R + ++ FR + + + + + N A + Sbjct: 387 AEVVQYHGVLHDITERRKGEHDLRLAQVLFRT----TNEALMISSRDNKIEMVNPAFSRI 442 Query: 335 LGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAV 394 GY +E+ G L Q+ + + + E ++G+ L++ Sbjct: 443 TGYQLDEVLGKGPDLLQSGRHDAPFYTQMWHALQ-QDGAWEGEIWNRRKSGETYPEWLSI 501 Query: 395 SLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSW 454 + V + G + ++A DI + K+ E+ L + + Sbjct: 502 ATVTNDKGETVQYVAAFSDITKRKQAEETILHQANYDFLTDLPNRNLFH--DRLQTELKR 559 Query: 455 DKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIR 514 +R + + ++ + + + + L D Sbjct: 560 SQRSGQQVALLFIDLDRFKFVNDTLGHNVGDQLLREVAIRLGHCVRESDTIARLGGDEFT 619 Query: 515 HIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCI--D 572 I L+ V RL +D +L E + L S + D Sbjct: 620 VIL----PELHGPEGVARLAQGMID-----KLEERYCIQDHEL---FISASIGITIYPED 667 Query: 573 MAMKITFMNPVAEKMSGWTQEEALGVPLLTV----LHITFGDNGPLMENIYSADTSRSAI 628 + + M + +E G ++ + + + A Sbjct: 668 ADNMMDLVKNADVAM--YRAKE-NGRGSFCFYTAEMNADARQLHKIEQALRVALEEGQFW 724 Score = 117 bits (294), Expect = 3e-24, Method: Composition-based stats. Identities = 47/341 (13%), Positives = 92/341 (26%), Gaps = 18/341 (5%) Query: 214 WPFTFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPF 273 +L++W+ T + + D + Sbjct: 201 MAVILTALLVVWAISVKIGRSITRPLFQTRQAMLRLANGDLDVPLEDMDRSELGDLSQAL 260 Query: 274 LLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALV--GTEGQWLQTNKAL 331 + I + K +E +E S + E ++ Sbjct: 261 RVFRDQFAINEGLRLEREESLKQAAEKREELARIIEISHTVVLSWENDEEWSLSYVSENC 320 Query: 332 CQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYS---MEKRYYNRNGDVV 388 + L + L L PEDL Q+E L++ + +E R + + Sbjct: 321 YRILQSGLKSLVLKP---LVNPEDLP----QMEALLAAGGDASRWVKLEFRLCLGSEEPR 373 Query: 389 WALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELK 448 W V ++ + + + DI E ++ E + NE + Sbjct: 374 WFECCVLPIKDDHAEVVQYHGVLHDITERRKGEHDLRLAQVLFRTTNE----ALMISSRD 429 Query: 449 PNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRIT 508 I + + D + +LQ ++ E Sbjct: 430 NKIEMVNPAFSRITGYQLDEVLGKGPDLLQSGRHDAP-FYTQMWHALQQDGAWEGEIWNR 488 Query: 509 VKDGIRHIRALAN-RVLNKEGEVERLLGINMDMTEVKQLNE 548 K G + L+ V N +GE + + D+T+ KQ E Sbjct: 489 RKSGETYPEWLSIATVTNDKGETVQYVAAFSDITKRKQAEE 529 >UniRef50_C7LQR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=C7LQR9_DESBD Length = 1262 Score = 874 bits (2260), Expect = 0.0, Method: Composition-based stats. Identities = 216/1111 (19%), Positives = 399/1111 (35%), Gaps = 58/1111 (5%) Query: 22 LGLVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRHAGRM------------WPGIA 69 LG + F+ S+ + G W + ++V R P Sbjct: 150 LGEMGFVDFAGSMVVHGVGG-----WLSLAALLVVGPRQGRFPADGPPREINAGNLPLTV 204 Query: 70 LSCSLGNIAASILLFST------------SSLNMTWTTINIVEAVVGAVLLRKLLPWYNP 117 L L + + + ++G + R Y Sbjct: 205 LGAFLLWLGWFGFNGGSTLALNQTVPHIIVRTVLAGIAGGASNMLLGWMATRTPKITYLV 264 Query: 118 LQNLADWLRLALGSAIVPPLLGGVLVVLLTPGDDPLRAFLIWV-LSESIGALALVPLGLL 176 L + + V + ++ L+ + + +++GA+ + + Sbjct: 265 NGVLGGLVAVTASCHAVSNFDAVCIGLVAGAVCLGCELLLVRLRIDDAVGAVPVHLGCGI 324 Query: 177 FKPHYLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAF 236 + + +P +L L F V+L + P A Sbjct: 325 WGILAVALFGDPAVLQTGLSMTGQLWVQCLGIFAAFGVAFVVPFVVLRFIDPLFPLRVA- 383 Query: 237 LIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKH 296 T + VS A + P + + + + Sbjct: 384 PEDEDTGLNVSEHGAHTDIHDLFEILDRQAATRDFSLRAPEEPFTEVGHIAHRYNHVLDA 443 Query: 297 ISESETHFRNAMEYSAIGMALVGTEG-QWLQTNKALCQFLGYSQEELRGLTFQQLTWPED 355 + ++ + ++ +A + + T+ + + N G+ L G+T +L Sbjct: 444 LHDAVSKTEAIVKSAADAIIVFTTDTLRIISANPGASFIFGHPALRLEGMTIPELLPAWG 503 Query: 356 LNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDIN 415 + L+ ++ +E NG V ++ G +FI DI+ Sbjct: 504 IPGSGDNEASLLHAMRSSNQVEVTGRRANGSQVTLEAVITQSSGRQGD--FFIGTFRDIS 561 Query: 416 ELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI--PPHIKPNWQ 473 E KR E ++ E E G++ + + ++Y P + ++ Sbjct: 562 ERKRYENELRKAEENFRGIFENAVEGMFRTTPHGRYLQANPALAKIYGFESPAELMRHYD 621 Query: 474 VWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLNKEGEVER 532 + E E+ IR + F E I KDG + I A V + G V Sbjct: 622 DISRQLYVE-AGRREEFIRLLGEKEEIFDFESAIRRKDGSVIWISENARAVKDAAGNVVC 680 Query: 533 LLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQ 592 G MD+T+ + + +AL ++ + A+ +D +I +N E + G+ + Sbjct: 681 YEGTVMDITQRRAMQQALDRQMALFGQLFEDSPLAIALVDTVGRIAQVNGGFETLFGYKR 740 Query: 593 EEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLS 652 E LG + + + +I ++++ + G V+ P+ Sbjct: 741 AEILGKDNRLFIVP--EEQLSEINSIRQRILDGETVQRETLRRTSRGDIVPVNLLGHPVR 798 Query: 653 TLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNST-H 711 + G + QD++E ++ RQ+++ A HD+LT L NR+ F ++L ++ Sbjct: 799 -IGGEITNIFWIYQDISERKEFERQITHQAFHDSLTGLPNRSLFRERLGRAVERTKRRPD 857 Query: 712 QRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD 771 A + IDL++FK VNDS GH AGDALL E+AS + S +RS D +ARLGGDEF +LL + Sbjct: 858 YHFAAMLIDLNKFKWVNDSLGHQAGDALLVEIASRLKSCVRSVDTVARLGGDEFAILLEE 917 Query: 772 CNVE-SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACY 830 +A+RI + V F+W G+ GAS GI L + A +++ ADIA Y Sbjct: 918 FRTNKEVISVASRIQNEVRRA-FLWNGKEIVSGASVGIVLQTRDCAGAEDILRDADIAMY 976 Query: 831 ASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLW 890 +K GRG + V+ + E M + + R I+ N L + + + Sbjct: 977 KAKERGRGHL-VFHNRMRQEVLEVINMENELR-RAIEGNSLELHYQPIFDV--DGGKLEG 1032 Query: 891 LISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKG-----IS 944 +L W E +I F + L L + V + +Q G ++ Sbjct: 1033 FEALVRWRHPEHGMIMPDRFIPLAEESGLIVPLGQWVVNAACRQLKSWDDESGTAEYGLT 1092 Query: 945 ISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRLAG 1000 +S+ LS + TLV+ +L L + + P L L I AI+ E +++L+ G Sbjct: 1093 MSVNLSCKQFAQHTLVDMILRALRENDIAPPRLKLEITESAIILDPAAAAEKLRRLKEIG 1152 Query: 1001 CRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKT 1060 + + G + L+ D L +D + + ++ I A LG++ Sbjct: 1153 VLLAVDDFGTGYSSLSYLRQFPMDILKIDRSFISGTDTPKENAEIVRSIVDMAHSLGLRV 1212 Query: 1061 IAGPVVLPLVMDTLSGIGVDLIYGEVIADAQ 1091 A V ++ L I D G + + Sbjct: 1213 TAEGVETQEQLERLQSINCDRAQGYMFSKPM 1243 >UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TLA6_ACIAC Length = 1120 Score = 874 bits (2259), Expect = 0.0, Method: Composition-based stats. Identities = 208/1127 (18%), Positives = 398/1127 (35%), Gaps = 85/1127 (7%) Query: 36 LSQFGTQLAPLWFPTSIMMVAFYRHAGRMWPGIALSCSLGNIAASILLFSTSSLNMTWTT 95 G+ L L+ + + + L+M Sbjct: 6 PPSSGSFLRALFSESPAATAVLLVVGMAAMFIPVMQLL--DTGLGGPYVVEQFLDMVAVL 63 Query: 96 INIVEAVVGAVLLRKLLPWYNPLQNLADWLRLALGSAIVPPLLGGVL-----VVLLTPGD 150 I ++ V +L Q A+ L L +A V L GVL Sbjct: 64 IGVLAVSVSLHML------DESAQGRANILVAGLATAAVCNFLHGVLPHQPLGTGQDAQV 117 Query: 151 DPLRAFLIWVLSESIGALALVPLGLLFKPHYLLRHRNPRLLFESLLTLAITLTLSWLSML 210 R F +W + ++ L+ L +L++ +L ++W + Sbjct: 118 AVSRYFSLW--GHGVESVTLLLFALRASAAGPGM-------AWALVSALASLAIAWTATT 168 Query: 211 YLP--WPFTFIIVLLMWSAVRLPRMEAFLIFLTTVM-------------------MVSLM 249 +P W L +A+ + A L M ++ Sbjct: 169 DVPRDWLVAAGHAPLRIAALVSGTLMALSACLFYGMRQRRTDASVKRHGRRRTMAAAAVS 228 Query: 250 MAADPSLLATP-----RTYLMSHMPWLPFLLILLPANIMTMVM---YAFRAERKHISESE 301 MAA L+A P +++H + +L A + + R + ESE Sbjct: 229 MAAAQFLMAVPPERFYWARMLAHALHVAGYALLFQAVFIAGIRMPYARLREAESRLRESE 288 Query: 302 THFRNAMEYSAIGM---ALVGTEGQWLQTN--KALCQFLGYSQEELR--GLTFQQLTWPE 354 + + + + +G+ + +AL + +G S ++ PE Sbjct: 289 SRLQLLGRNLPDSVPYQMVREPDGRRRFVHMGEALERLVGVSAADVMEDAQRLFDRIDPE 348 Query: 355 DLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSL--VRHTDGTPLYFIAQIE 412 D + E S+ R +G W L+ S ++ G + + + Sbjct: 349 DRAAQAEADEVSYRTMGVGESV-VRMRRMDGAPRWIRLSSSPRLLQGGSGRVI-WDGVLT 406 Query: 413 DINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNW 472 D+ + + + +++ ++ GI + I + + P Sbjct: 407 DVTQQREAQDLSRAHEIQLASLLGRMPGGISRLDRDLRILYVNPSQAQWLRRTPQELEGQ 466 Query: 473 QVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD-GIRHIRALANRVLNKEGEVE 531 + + + E Q + +LQ P ++R + G +G V Sbjct: 467 RA-SDVLSAELLQSLHPHMLQALQ-GRPVVFDYRSPYRGAGPEFFHTTIIPETGPDGRVV 524 Query: 532 RLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWT 591 ++ +D+TE K L L Q++ RL +++I + V D A + NPV E+ G Sbjct: 525 AIMVFAVDVTEQKHLALELSQQRSRLASLVNAIPDVVFLKDAAGRYLSCNPVFERYLGRR 584 Query: 592 QEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPL 651 + + +G+ ++ ++ + + + ++ + G + TP+ Sbjct: 585 ERDIVGLGDEELMTPVEAARVRQLDE-RAMAAWQPLVYEETLTFAEDGYAGYFETIKTPI 643 Query: 652 STLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTH 711 + G G + V +D+T+ +K +Q+ A DALT L NR +L+ Sbjct: 644 RDMHGHVTGLLSVSRDITDRKKAEQQIELLAFFDALTGLPNRRLLLDRLQRAGAACQRNE 703 Query: 712 QRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD 771 + AL+FIDLD FK +ND+ GH GD LL ++A + +R+SD +AR GGDEF ++L Sbjct: 704 KLGALLFIDLDNFKDLNDTLGHDMGDRLLVQVAQRLQECVRTSDTVARFGGDEFVVMLEG 763 Query: 772 CNVE------SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQA 825 + + A +A ++++ +N F + H S GITL D E++ +A Sbjct: 764 LDADTALAALQAEQVAEKLLAQLNR-PFEMGAQQHYSTPSIGITLFGDQRRTVDELLKRA 822 Query: 826 DIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPE 885 D+A Y +K GR ++P A + R+ + D + + I ++L + + Sbjct: 823 DLAMYQAKAAGRNTQRFFDPDMQAQVTARSQLESDLR-QGIARHELTVHLQPIVD---GS 878 Query: 886 ARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKG-- 942 R +L W +I F + L L R+V +Q + Sbjct: 879 TRLCGAEALVRWRHPVKGLISPADFIPLAEETGLILPLGRQVLQTACEQLVRWATHPATA 938 Query: 943 -ISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLR 997 +I++ +S V ++L L + P+ L L + +L E + +L+ Sbjct: 939 SFTIAVNVSARQFRQPDFVAEVLGTLAGTGANPQRLKLELTESLLLGDVEDTICRMAQLK 998 Query: 998 LAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLG 1057 G L G + LK D + +D +V + D ++ I A+ L Sbjct: 999 RVGVGFALDDFGTGYSSLSYLKRLPLDLVKIDQSFVRDVLTDPNDAAIVRTILALAKSLD 1058 Query: 1058 MKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNSSYFAI 1104 ++ +A V + L G + G + PL+ + Sbjct: 1059 LQVVAEGVETAGQLSFLKLHGCEGFQGYLFGRPVPLEAFEREHDLPV 1105 >UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Arthrospira RepID=B5VXY3_SPIMA Length = 1092 Score = 874 bits (2259), Expect = 0.0, Method: Composition-based stats. Identities = 164/804 (20%), Positives = 299/804 (37%), Gaps = 57/804 (7%) Query: 314 GMALVGTEGQWLQTNKALCQFLGYSQ-------EELRGLTFQQLTWPEDLNKDLQQVEKL 366 G + + ++ L LG + E+L EDL +Q Sbjct: 317 GSWCLNMNTGEMIVSEQLYHILGLTPQPTSINFEQLLNQ-----IHVEDLYGWVQNYATS 371 Query: 367 ISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI------EDINELKRT 420 + + N YS+ R + V W + V G + I+ I E +N Sbjct: 372 LFVKQN-YSLNYRIIQPDSSVHWVSQESTPVSDRHGQVTHIISTIKAIENPEIVNPSITA 430 Query: 421 EQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVL 480 E ++ R+ G+ K + L+ P + V Sbjct: 431 EAALRESEARLRTIISTSTNGLVVVNRKGRALFINPAAEALFGRPASQLEGELIGIPLVT 490 Query: 481 PEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDM 540 E E I +DG I + ++ E E L D+ Sbjct: 491 KE-------------------STELEILRQDGQLKIVRMRVVEISWEQE-TAYLASLTDV 530 Query: 541 TEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPL 600 T+ K+ + L + D ++V D I ++NP E+++G+ E +G Sbjct: 531 TDFKKTEDQL----KMFSRACDQSPVSIVITDSEGDIQYVNPKFEEITGYKAGEVIGQNP 586 Query: 601 LTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIG 660 + + P + ++ TS + ++G + H SI P+ +G Sbjct: 587 RILK--SGYTTEPEYDVLWRQITSGKQWSGEFHNKKKNGELFWEHASICPMRDEEGYITH 644 Query: 661 SVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFID 720 + V +D+T+ + L++ A++DALT L NR +LR + H A++FID Sbjct: 645 FIAVKEDITQQKHNEEILAHQANYDALTDLPNRTLIFDRLRQAITEAQVHHSNVAVMFID 704 Query: 721 LDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNV-ESARF 779 LD FK +ND+ GH GD LL+E + +R +D + RLGGDEF L++P + A + Sbjct: 705 LDHFKNINDTLGHELGDFLLKEAGMRLRGCIRKTDTVGRLGGDEFLLIIPKLDDLVQAEY 764 Query: 780 IATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGR 839 IA +++ + + F G + AS GI + + ++ AD A YA+K GR Sbjct: 765 IANQVLDVLGE-PFNLCGEEAFISASIGIASYPQDGKNVSTLVRNADTAMYAAKQEGRNV 823 Query: 840 VTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-S 898 + R + + I N+L ++ + ++ + +L W + Sbjct: 824 FAFFTQNMNDEAQSRIIIENQLR-HAISRNELSVVYQPFI--HLNTSQIVGAEALMRWYN 880 Query: 899 CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK--GISISLPLSVAGLSS 956 E I F + L L + + Q+ A G+ +++ +S L + Sbjct: 881 PELGNIRPDQFIAIAEESRLIVDLGEWILSQACQEVANWHQQGNNGLWVAVNMSPRQLRT 940 Query: 957 ATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRLAGCRIVLSQVGRDL 1012 LVN ++E + N+ L L L I ++++ +++L R+ + G Sbjct: 941 PNLVNVIIEAIANNGLSSDCLELEITERSLVEEVPGVQSLIKQLNHLKIRLAIDDFGTGY 1000 Query: 1013 QIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMD 1072 + LK L +D +++ + L+ + A LG+ +A + +D Sbjct: 1001 SSLSYLKRFPFSVLKIDKSFISDLPDDQDAIALVKTMITMAHGLGLVVVAEGIETTAQLD 1060 Query: 1073 TLSGIGVDLIYGEVIADAQPLDLL 1096 L G D G + + P Sbjct: 1061 FLCNQGCDYGQGYLFSKPLPPAQF 1084 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 56/385 (14%), Positives = 126/385 (32%), Gaps = 41/385 (10%) Query: 302 THFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQ 361 + + + + ++ E + + N+ + L + + PE + Sbjct: 189 SQMERILNAINLPIFILNQEHKIIFANRKAHETLVVNSQ----------IPPELETWLRE 238 Query: 362 QVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTE 421 + ++ I+ E ++ W L + + DG+ IA EDI + K Sbjct: 239 RSPQIADTNISEIVAEIPI-TKDNITEWFCLRLYPIDSQDGSDFRAIAICEDITDSKLKA 297 Query: 422 QVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIK-PNWQVWYECVL 480 Q Q + + G W + ++++ + + P N++ + Sbjct: 298 QRQQLQQQHLAQVQALTKTGSWCLNMNTGEMIVSEQLYHILGLTPQPTSINFEQLLNQIH 357 Query: 481 PEDRQHAEKVIRDSLQSRSPFKLEFRITVKD-GIRHIRALANRVLNKEGEVERLLGINMD 539 ED + SL + + L +RI D + + + V ++ G+V ++ Sbjct: 358 VEDLYGWVQNYATSLFVKQNYSLNYRIIQPDSSVHWVSQESTPVSDRHGQVTHIISTIKA 417 Query: 540 MTE------VKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQE 593 + AL + + RL + + +V ++ + F+NP AE + G Sbjct: 418 IENPEIVNPSITAEAALRESEARLRTIISTSTNGLVVVNRKGRALFINPAAEALFGRPAS 477 Query: 594 EALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLST 653 + G + L ++ + + G V + +S Sbjct: 478 QLEGELIGIPLVTKEST--------------------ELEILRQDGQLKIVRMRVVEISW 517 Query: 654 LDGSNIGSVLVIQDVTESRKMLRQL 678 + + DVT+ +K QL Sbjct: 518 E--QETAYLASLTDVTDFKKTEDQL 540 Score = 132 bits (334), Expect = 6e-29, Method: Composition-based stats. Identities = 49/309 (15%), Positives = 98/309 (31%), Gaps = 55/309 (17%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 + ESE R + S G+ +V +G+ L N A G +L G +L Sbjct: 429 TAEAALRESEARLRTIISTSTNGLVVVNRKGRALFINPAAEALFGRPASQLEG----ELI 484 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 + ++ S E ++G + + V + ++A + Sbjct: 485 ---GIPLVTKE------------STELEILRQDGQLKIVRMRVVEISWE--QETAYLASL 527 Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPN 471 D+ + K+TE + + A + + I + + +I + + E+ Sbjct: 528 TDVTDFKKTEDQLK----MFSRACDQSPVSIVITDSEGDIQYVNPKFEEITGYKAGEVIG 583 Query: 472 WQVWY----ECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRA-LANRVLNK 526 PE V+ + S + EF K+G + ++ Sbjct: 584 QNPRILKSGYTTEPE-----YDVLWRQITSGKQWSGEFHNKKKNGELFWEHASICPMRDE 638 Query: 527 EGEVERLLGINMDMTEVKQLNEALFQEK---------------ERLHIT-----LDSIGE 566 EG + + + D+T+ K E L + +RL + Sbjct: 639 EGYITHFIAVKEDITQQKHNEEILAHQANYDALTDLPNRTLIFDRLRQAITEAQVHHSNV 698 Query: 567 AVVCIDMAM 575 AV+ ID+ Sbjct: 699 AVMFIDLDH 707 >UniRef50_Q21R50 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhodoferax ferrireducens T118 RepID=Q21R50_RHOFD Length = 1052 Score = 873 bits (2256), Expect = 0.0, Method: Composition-based stats. Identities = 146/690 (21%), Positives = 269/690 (38%), Gaps = 30/690 (4%) Query: 424 NQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPED 483 Q + + + I+ + + I ++RM L+ P H + + V P Sbjct: 369 LGQREALLQQILDTSSVAIFLVDRQGRITKANQRMATLFGYPLHELQGME-YVALVHPAQ 427 Query: 484 RQHAEKVIRDSLQSR-SPFKLEFRITVKDGIRHI-RALANRVLNKEGEVERLLGINMDMT 541 R+ K + L S LE D R ++ GE + L+G+ D+T Sbjct: 428 RETGRKNMLALLDSALQSVDLERLYWRADQTEFWGHLTGQRFVDGNGEEQGLVGVIADIT 487 Query: 542 EVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLL 601 + +Q L I + + + D + +N ++G++ EA+G Sbjct: 488 QRRQTEAEL----RIAAIAFE-SEQGMAITDPQGVMLRVNRAFSAITGYSAPEAVGQNPR 542 Query: 602 TVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGS 661 + + + ++ + A + ++ ++G + +I+ + G Sbjct: 543 LL--SSGRHDAAFYAAMWDSLVREGAWQGEIWNRRKNGEVFPEWLTISAVKDPAGQATHY 600 Query: 662 VLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDL 721 V D++ + Q+ A +D LT L NR +L+ L + ++ AL++IDL Sbjct: 601 VATFTDLSTRKSAEDQIKSLAFYDTLTGLPNRRLLLDRLKQALASGARHRRQGALLYIDL 660 Query: 722 DRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE------ 775 D FK +N++ GH GD LL+E+A + LR+ D +AR GGD F +LL + Sbjct: 661 DDFKTLNNTYGHDVGDQLLQEVAQRLSHYLRAGDTVARPGGDSFVVLLEALSTNSVEAAT 720 Query: 776 SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDD-NNHQAAEVMSQADIACYASKN 834 A +I A++ + HR AS G+TL DD E + +A++A Y +K Sbjct: 721 EAENTGEKIRLALSQ-PYQIADHAHRSTASIGVTLFDDRQQEGIDEPLKRAELAMYQAKT 779 Query: 835 GGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISL 894 GR + ++PQ A AA+ D + ++ NQ ++ S E + + +L Sbjct: 780 AGRNTLRFFDPQMQTAVMAMAALEADLR-EAVRSNQFLLYYQAQVS---GERQVAGVEAL 835 Query: 895 KLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK---GISISLPLS 950 W ++ F L L + V Q A + +++++ +S Sbjct: 836 VRWQHPVRGLVPPAEFIPLAEQTGLILPLGQWVLETACAQLAAWASQPERAHLTVAVNVS 895 Query: 951 VAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLS 1006 A V +L L+ + P+ L L + ++ AE + L+ G L Sbjct: 896 ALQFHQADFVAQVLAALKRAGANPQRLKLELTESLLVHDAEDVIAKMITLKEQGVGFSLD 955 Query: 1007 QVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVV 1066 G + LK + L +D ++ + D + ++ A LG+ IA V Sbjct: 956 DFGTGYSSLSYLKRLPLNQLKIDQGFVRDILHDANDAAIAKMVVALADTLGLSVIAEGVE 1015 Query: 1067 LPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 D L+ G G + + A P+D Sbjct: 1016 TEAQRDFLAAQGCHAYQGHLYSRALPIDAF 1045 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 45/299 (15%), Positives = 99/299 (33%), Gaps = 7/299 (2%) Query: 253 DPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSA 312 P L R M+ L + + + V+ F + + E + ++ S+ Sbjct: 325 APLLATARRLAAMADEKQALRALPVTHPDEIGQVVKGFNRLLGTLGQREALLQQILDTSS 384 Query: 313 IGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEIN 372 + + LV +G+ + N+ + GY EL+G+ + L P + + L+ + Sbjct: 385 VAIFLVDRQGRITKANQRMATLFGYPLHELQGMEYVALVHPAQRETGRKNMLALLDSALQ 444 Query: 373 TYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERIT 432 + +E+ Y+ + W L +G + I DI + ++TE RI Sbjct: 445 SVDLERLYWRADQTEFWGHLTGQRFVDGNGEEQGLVGVIADITQRRQTEAEL-----RIA 499 Query: 433 LANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIR 492 G+ + + + ++ + D + Sbjct: 500 AIAFESEQGMAITDPQGVMLRVNRAFSAITGYSAPEAVGQNPRLLSSGRHDAA-FYAAMW 558 Query: 493 DSLQSRSPFKLEFRITVKDGIRHIRA-LANRVLNKEGEVERLLGINMDMTEVKQLNEAL 550 DSL ++ E K+G + V + G+ + D++ K + + Sbjct: 559 DSLVREGAWQGEIWNRRKNGEVFPEWLTISAVKDPAGQATHYVATFTDLSTRKSAEDQI 617 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 41/286 (14%), Positives = 82/286 (28%), Gaps = 8/286 (2%) Query: 212 LPWPFTFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWL 271 L V L+ A R + L L + + + T ++ ++ Sbjct: 411 LHELQGMEYVALVHPAQRETGRKNMLALLDSALQSVDLERLYWRADQTEFWGHLTGQRFV 470 Query: 272 PFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKAL 331 + + R + S GMA+ +G L+ N+A Sbjct: 471 DGNGEEQGLVGVIADITQRRQTEAEL-----RIAAIAFESEQGMAITDPQGVMLRVNRAF 525 Query: 332 CQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWAL 391 GYS E G + L+ + + E + E +NG+V Sbjct: 526 SAITGYSAPEAVGQNPRLLSSGRHDAAFYAAMWDSLVRE-GAWQGEIWNRRKNGEVFPEW 584 Query: 392 LAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNI 451 L +S V+ G +++A D++ K E + L TL + + Sbjct: 585 LTISAVKDPAGQATHYVATFTDLSTRKSAEDQIKSLAFYDTLTGLPNRRLL--LDRLKQA 642 Query: 452 FSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQS 497 + R + +++ + + + L Sbjct: 643 LASGARHRRQGALLYIDLDDFKTLNNTYGHDVGDQLLQEVAQRLSH 688 Score = 87.8 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 47/326 (14%), Positives = 104/326 (31%), Gaps = 42/326 (12%) Query: 394 VSLVRHTDGTPLYFIA--------QIEDINELKRT-----EQVNQQLMERITLANEAGGI 440 ++L+R G + +A D+ R + R+ A + + Sbjct: 174 ITLIRDAGGRVIGALAGVTNLDQPSFLDMISQSRYGKTGGYVLIAAQQRRVLAATDKSRV 233 Query: 441 GIWEWELKPN-------------IFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHA 487 N + E+ + V + + Sbjct: 234 MEVLPAPGGNPAIDRFLQGEEGSTVMRNPLGLEILASDKSLPAAGWVLAAVLPTAEAFAP 293 Query: 488 EKVIRDSL-----QSRSPFKLEFRITVKDGIRHIRALANR---VLNKEGEVERLLGINMD 539 + ++ + L T+K + + A A R + +++ + L + D Sbjct: 294 VRAMQQRMLLATSLLTLLAGLVVWWTIKRQLAPLLATARRLAAMADEKQALRALPVTHPD 353 Query: 540 -----MTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEE 594 + +L L Q + L LD+ A+ +D +IT N + G+ E Sbjct: 354 EIGQVVKGFNRLLGTLGQREALLQQILDTSSVAIFLVDRQGRITKANQRMATLFGYPLHE 413 Query: 595 ALGVPLLTVLHITFGDNGPLMENIYSADTSR-SAIEQDVVLHCRSGGSYDVHYSITPLST 653 G+ + ++H + G +N+ + S +++ + + + H + Sbjct: 414 LQGMEYVALVHPAQRETGR--KNMLALLDSALQSVDLERLYWRADQTEFWGHLTGQRFVD 471 Query: 654 LDGSNIGSVLVIQDVTESRKMLRQLS 679 +G G V VI D+T+ R+ +L Sbjct: 472 GNGEEQGLVGVIADITQRRQTEAELR 497 >UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q478F7_DECAR Length = 739 Score = 873 bits (2256), Expect = 0.0, Method: Composition-based stats. Identities = 132/698 (18%), Positives = 254/698 (36%), Gaps = 43/698 (6%) Query: 433 LANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVI- 491 E G I I +++ ++ P + L ++ ++ Sbjct: 33 SIFEHAGRAIILTNPDGLISYFNRAAQQMLGYTPEEVVGRETPLLFHLADEISACARLYS 92 Query: 492 ----------------RDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLG 535 R L+ R + + + + + + +G V+ LG Sbjct: 93 CEPDGTPPAGFGVFISRLKLKIRDEADWTY-VRKDGSHLPVSLAVSVLRDAKGGVQGYLG 151 Query: 536 INMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEA 595 I D++E +++ L I + A++ D+ +I +N K++G++ EEA Sbjct: 152 IASDISERRRMEHDL----RIAAIAFE-SQAAIMVTDVNQRILRVNQAFTKLTGYSAEEA 206 Query: 596 LGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLD 655 +G + + + ++ + + ++ ++G + +I+ + Sbjct: 207 IGQTPGMLK--SGRQDADFYAAMWCSLGQCGHWQGEIWNRRKNGEIFPEWLTISGVRDGR 264 Query: 656 GSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHA 715 G V D++ + ++ + A +D LT + NR +L + + Q A Sbjct: 265 GKVTHYVSTFSDISNLKVAESEIHHLAFYDPLTAMPNRRLLLNRLDQACVSAKRSGQFGA 324 Query: 716 LVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE 775 L+ ID+D FK +ND+ GH GD LL E+A + + +R D AR GGDEF ++L + E Sbjct: 325 LLIIDIDHFKTLNDTLGHDVGDHLLVEVARRLSACIREGDTAARQGGDEFVVMLEELGSE 384 Query: 776 ------SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIAC 829 A +A +I + + + + AS GI+L ++ QADIA Sbjct: 385 QEGAAVQAEIVAEKIRLELARPYLLNGDTEYFRSASIGISLFFGQEKTIDILLKQADIAL 444 Query: 830 YASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNL 889 Y +K+ GR + ++ ERA + + R + ++ ++ R + Sbjct: 445 YKAKDAGRNAIRFFDTAMQTTLDERAELEAGLR-RALVRDEFVLYVQPQVDAV---RRLI 500 Query: 890 WLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKG---ISI 945 +L W ++ F + L + V + + + + + Sbjct: 501 GAEALLRWQPPGRAMVAPNDFIPLAEETGLIVPIGIWVLDQACAELRRWADDPRSASLFL 560 Query: 946 SLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRLAGC 1001 S+ +S A V + + L PRLL L + +LD+ E +Q LR G Sbjct: 561 SVNVSARQFRQADFVAQVADALARHGANPRLLKLELTESLLLDNVEEVIEKMQALRTIGV 620 Query: 1002 RIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTI 1061 R L G + LK + L +D ++ N D ++ I L + + Sbjct: 621 RFSLDDFGTGYASLSYLKRFPFEQLKVDRSFIRDININPDDAAIVRAIIAMGNTLRLSVV 680 Query: 1062 AGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNS 1099 A V L L L G + D S Sbjct: 681 AEGVEDDLQHAYLVKHECSLFQGYLFGRPMSFDDFRAS 718 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 81/262 (30%), Gaps = 22/262 (8%) Query: 306 NAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEK 365 + E++ + L +G N+A Q LGY+ EE+ G L D ++ Sbjct: 33 SIFEHAGRAIILTNPDGLISYFNRAAQQMLGYTPEEVVGRETPLLFHLADEISACARLYS 92 Query: 366 LISGEINTY---------------SMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQ 410 + Y ++G + LAVS++R G ++ Sbjct: 93 CEPDGTPPAGFGVFISRLKLKIRDEADWTYVRKDGSHLPVSLAVSVLRDAKGGVQGYLGI 152 Query: 411 IEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKP 470 DI+E +R E RI I ++ I ++ +L Sbjct: 153 ASDISERRRMEHDL-----RIAAIAFESQAAIMVTDVNQRILRVNQAFTKLTGYSAEEAI 207 Query: 471 NWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRA-LANRVLNKEGE 529 +D + SL ++ E K+G + V + G+ Sbjct: 208 GQTPGMLKSGRQDAD-FYAAMWCSLGQCGHWQGEIWNRRKNGEIFPEWLTISGVRDGRGK 266 Query: 530 VERLLGINMDMTEVKQLNEALF 551 V + D++ +K + Sbjct: 267 VTHYVSTFSDISNLKVAESEIH 288 Score = 139 bits (351), Expect = 7e-31, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 68/234 (29%), Gaps = 12/234 (5%) Query: 281 NIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQE 340 + + R + S + + + L+ N+A + GYS E Sbjct: 150 LGIASDISERRRMEHDL-----RIAAIAFESQAAIMVTDVNQRILRVNQAFTKLTGYSAE 204 Query: 341 ELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHT 400 E G T L + + G+ + E +NG++ L +S VR Sbjct: 205 EAIGQTPGMLKSGRQDADFYAAMWCSL-GQCGHWQGEIWNRRKNGEIFPEWLTISGVRDG 263 Query: 401 DGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIW-EWELKPNIFSWDKRMF 459 G ++++ DI+ LK E L L + + + Sbjct: 264 RGKVTHYVSTFSDISNLKVAESEIHHLAFYDPLTAMPNRRLLLNRLDQACVSAKRSGQFG 323 Query: 460 ELYEIPPHIKPNW-----QVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRIT 508 L I + +L E + IR+ + EF + Sbjct: 324 ALLIIDIDHFKTLNDTLGHDVGDHLLVEVARRLSACIREGDTAARQGGDEFVVM 377 >UniRef50_A4Y0E0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=23 Tax=Pseudomonas RepID=A4Y0E0_PSEMY Length = 766 Score = 873 bits (2256), Expect = 0.0, Method: Composition-based stats. Identities = 159/701 (22%), Positives = 289/701 (41%), Gaps = 21/701 (2%) Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELY 462 L ++ + +R ER+ LA +A G+W+W+ + L Sbjct: 55 AALLYLVLHRHAQQYRRARLQLTSNEERLRLALDATRDGLWDWDFAAQRVFFSPSYAALL 114 Query: 463 EIPPHIK-PNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGI-RHIRALA 520 + P W E + PEDR+ + + Q S + +R+ DG R + Sbjct: 115 GLTPQALGDTRDAWAERLHPEDRERVLQALALDQQYDS-YDNVYRLRHADGTYRWFHSRG 173 Query: 521 NRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFM 580 + ++ G +R +GI D+T+ + A + + D+ E V+ D +I + Sbjct: 174 RLLRDEGGRPQRFIGIASDITQQR----ANDESLRQAAAVFDATQEGVLVTDPEQRIVHV 229 Query: 581 NPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGG 640 NP +++G++ EE LG + + + ++++ A +R A +V +SG Sbjct: 230 NPAFSRITGYSAEEVLGQHPTLLK--SGRHDAAFYQSLWQALHNRDAWSGEVWNRRKSGE 287 Query: 641 SYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQL 700 Y I + G V V D+T ++ R+L Y A HD L++L NR F +++ Sbjct: 288 IYPQWQCIRVIHDEHGRISHYVAVFSDITALKRSQRELDYLAHHDPLSNLPNRLLFTERI 347 Query: 701 RILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARL 760 L+ S R A++ IDLD FK +N+S GH GD LL+ + + L LARL Sbjct: 348 AHALERSKSEQLRGAVLLIDLDHFKHINESLGHNVGDLLLKSVGERLQQDLPGGCTLARL 407 Query: 761 GGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAA 819 GGDEFGLL C + A +A ++ + + F + +GAS GI+L D+ Sbjct: 408 GGDEFGLLSETCADAPQAAELAQNLLRCL-EAPFRLDEHELYIGASIGISLFPDDADSVE 466 Query: 820 EVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVA 879 +V+ AD A + +K+ GR Y + +R ++ + + ++L + + Sbjct: 467 QVLRNADSALFKAKSSGREGYAFYVQELTDYARQRVELASSLR-HALDNHELRVFYQPLH 525 Query: 880 SPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA- 937 + + + +L W + +I F D + +D V + Q + Sbjct: 526 D--LENGNPVGMEALVRWQHPQRGLIPPAEFIPIAEDNGMIGPIDAWVLEQACGQMMRWN 583 Query: 938 VASKGIS-ISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES---- 992 + +++ +S S L + + L + L P+ L L + AI++ ++ Sbjct: 584 AEGSALRFVAVNVSSRLFSRGELDLKVAQVLAETGLSPQQLELEVTESAIMEDPDAALSL 643 Query: 993 VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGH 1052 + +LR G R+ + G LK D L LD + ++ D + + Sbjct: 644 LTRLRALGVRLAIDDFGTGYSSLARLKRLPVDKLKLDQSFVRGLPDDIEDAAIARAVIAL 703 Query: 1053 AQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPL 1093 LG+ +A + P +D L +G D G P+ Sbjct: 704 GHSLGLNVLAEGIESPAQVDFLRALGCDYGQGYHFGRPAPV 744 Score = 188 bits (479), Expect = 9e-46, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 108/303 (35%), Gaps = 14/303 (4%) Query: 255 SLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAF----RAERKHISESETHFRNAMEY 310 ++L L + + L A ++ +V++ R R ++ +E R A++ Sbjct: 30 TVLGLSLAQLERLQSLKGLIFVGLTAALLYLVLHRHAQQYRRARLQLTSNEERLRLALDA 89 Query: 311 SAIGMALVGTEGQWLQTNKALCQFLGYSQEEL--RGLTFQQLTWPEDLNKDLQQVEKLIS 368 + G+ Q + + + LG + + L + + PED + LQ + + Sbjct: 90 TRDGLWDWDFAAQRVFFSPSYAALLGLTPQALGDTRDAWAERLHPEDRERVLQAL--ALD 147 Query: 369 GEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLM 428 + ++Y R + +G W L+R G P FI DI + + ++ +Q Sbjct: 148 QQYDSYDNVYRLRHADGTYRWFHSRGRLLRDEGGRPQRFIGIASDITQQRANDESLRQAA 207 Query: 429 ERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAE 488 +A G+ + + I + + D Sbjct: 208 ----AVFDATQEGVLVTDPEQRIVHVNPAFSRITGYSAEEVLGQHPTLLKSGRHDAA-FY 262 Query: 489 KVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVL-NKEGEVERLLGINMDMTEVKQLN 547 + + +L +R + E K G + + RV+ ++ G + + + D+T +K+ Sbjct: 263 QSLWQALHNRDAWSGEVWNRRKSGEIYPQWQCIRVIHDEHGRISHYVAVFSDITALKRSQ 322 Query: 548 EAL 550 L Sbjct: 323 REL 325 Score = 147 bits (372), Expect = 3e-33, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 60/156 (38%), Gaps = 1/156 (0%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + + +++ ES + + G+ + E + + N A + GYS EE+ G Sbjct: 189 IASDITQQRANDESLRQAAAVFDATQEGVLVTDPEQRIVHVNPAFSRITGYSAEEVLGQH 248 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 L Q + + + + +S E ++G++ + ++ G + Sbjct: 249 PTLLKSGRHDAAFYQSLWQALHNR-DAWSGEVWNRRKSGEIYPQWQCIRVIHDEHGRISH 307 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGI 442 ++A DI LKR+++ L L+N + Sbjct: 308 YVAVFSDITALKRSQRELDYLAHHDPLSNLPNRLLF 343 >UniRef50_B7JWK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Cyanothece RepID=B7JWK6_CYAP8 Length = 1143 Score = 872 bits (2255), Expect = 0.0, Method: Composition-based stats. Identities = 180/843 (21%), Positives = 333/843 (39%), Gaps = 44/843 (5%) Query: 279 PANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYS 338 + + + + +SE FR + + G+ +V EG N A + S Sbjct: 328 LIYAVARDITEEKKIEIALKDSEERFRQIVTTISDGLIVVNLEGNIRFVNLAAQELFVRS 387 Query: 339 QEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVR 398 + EL L P L + ++ E ++ A + + + Sbjct: 388 ETEL-------LEHPFGLPIVVDKI------------TEICIQPSRNTLIVAEMRSAEIT 428 Query: 399 HTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRM 458 ++ + +I + + Q + E+ E GIW + I + +M Sbjct: 429 WEGEK--GYLISLRNITDSYQANQKLAESEEKYRKIVETTNEGIWISDHHNKITFVNHQM 486 Query: 459 FELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIR 517 E+ + + EK + + QS P + ++ +DG Sbjct: 487 SEILGYTVDKMMGMSLLT-FIDAAQLSLVEKSGQKTEQSL-PGTHDLKLRRQDGSELWAI 544 Query: 518 ALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMK- 576 N + N EG+ LG+ D+T+ K+ +AL+ ++RL L+S+ + + D + Sbjct: 545 VSTNALFNPEGDYMGTLGLITDITKRKRTEQALYDSEKRLEGILNSLQDVIWSADPKTRQ 604 Query: 577 ITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHC 636 ++NP + + G E+ L + ++ L+ + + + E + Sbjct: 605 SLYLNPAIQLVYGRPMEDFF-RDPHLWLCMVHPEDQELVSHHLKLLEDKGSTEVHYRIIR 663 Query: 637 RSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASF 696 G + +H + G ++ + D+TE ++ QL Y+A+HD LT L NR F Sbjct: 664 PDGETRWLHSRSRLVYDEQGKSLRIDGINSDITERKQAEEQLQYNATHDTLTQLPNRLLF 723 Query: 697 EKQLRILLQTVNSTHQR-HALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSD 755 +L L+ A++F+DLD FK +NDS GHA GD LLRE+A + LR+ D Sbjct: 724 MDRLEHALERRRRYSDPLFAVLFLDLDEFKVINDSLGHALGDELLREIARRLQKSLRADD 783 Query: 756 VLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDN 814 LARLGGDEF +LL + +V+ A IA RI + F EG+ S GI L + Sbjct: 784 TLARLGGDEFTILLEEIHDVKDAIKIAERIHKDLTR-PFNLEGQEIFTNTSIGIALSNGE 842 Query: 815 NHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMML 874 A+E++ AD A Y +K GG+ +++ Q A+ R + D + R I+ + ++ Sbjct: 843 YEAASEILRDADTAMYRAKAGGKACYAIFDQQMHASAVSRLQLETDLR-RAIERQEFLVY 901 Query: 875 AHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQ 933 + S + +L W + ++ F + L + + + QQ Sbjct: 902 YQPIISLQHDT--LTGFEALIRWQHPQQGLVPPARFIPIAEETGLIVPIGEWILEQAAQQ 959 Query: 934 AAKAVAS----KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH 989 + + +S+ LS L A+L+ + L + + L + I ++++ Sbjct: 960 LKIWQTQYRNYESLKMSVNLSSKQLRDASLLGTIDRILSKTEIDNNALKVEITESILMEN 1019 Query: 990 A----ESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEML 1045 + + LR I L G + L + L +D ++ N + + Sbjct: 1020 VQVAADVLIALRERNIEICLDDFGTGYSSLSYLHRFPVNTLKIDRSFVMRMRPNDENSEI 1079 Query: 1046 ITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQP---LDLLVNSSYF 1102 + I A LGM+ IA + L + L IG + G A ++ L+ + ++ Sbjct: 1080 VRAIVSLAHILGMEIIAEGIETELQLAQLKWIGCEQGQGYFFAKPLATSEVEALLKNPHY 1139 Query: 1103 AIN 1105 N Sbjct: 1140 WAN 1142 Score = 206 bits (526), Expect = 4e-51, Method: Composition-based stats. Identities = 69/345 (20%), Positives = 145/345 (42%), Gaps = 22/345 (6%) Query: 295 KHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPE 354 + + HF+N + + +ALV +G+++Q N+A C +GY+ +EL L ++T PE Sbjct: 102 QELKRVNPHFQNIFNQAKVAIALVNLQGKFVQVNQAFCDLIGYTSQELIKLQLSKITHPE 161 Query: 355 DLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDI 414 + D Q + +L+ +S EKRY ++G ++W + VS+++ P YFI I I Sbjct: 162 ERLSDSQWLNQLLKNSCEAFSREKRYVKKDGSIIWGQVTVSVMKDQAKKPQYFIVIINAI 221 Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQV 474 ++ Q+ + + + + Q Sbjct: 222 SDR-------QETERHRDRFFVMSLDLLCIAGFDGYFKTLNPVFERILGYSSRELL-AQP 273 Query: 475 WYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLL 534 + E + P+DR + + + Q + E R +DG + + +E + + Sbjct: 274 FIEFIHPDDRSTSLAELANLRQGKETIHFENRYRCRDGSYRWLSWTSAPYMEE---KLIY 330 Query: 535 GINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEE 594 + D+TE K++ AL +ER + +I + ++ +++ I F+N A+++ ++ E Sbjct: 331 AVARDITEEKKIEIALKDSEERFRQIVTTISDGLIVVNLEGNIRFVNLAAQELFVRSETE 390 Query: 595 ALGVPLLTVLHIT--------FGDNGPLMENIYSADTSRSAIEQD 631 L P + + N ++ + SA+ + E + Sbjct: 391 LLEHPFGLPIVVDKITEICIQPSRNTLIVAEMRSAEIT---WEGE 432 Score = 127 bits (320), Expect = 3e-27, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 82/303 (27%), Gaps = 24/303 (7%) Query: 278 LPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQ-WLQTNKALCQFLG 336 + + + + + + +SE + + + + L N A+ G Sbjct: 558 MGTLGLITDITKRKRTEQALYDSEKRLEGILNSLQDVIWSADPKTRQSLYLNPAIQLVYG 617 Query: 337 YSQEELRGLT--FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAV 394 E+ + + PED ++ + + + + R +G+ W Sbjct: 618 RPMEDFFRDPHLWLCMVHPEDQELVSHHLK--LLEDKGSTEVHYRIIRPDGETRWLHSRS 675 Query: 395 SLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGI---WEWELKPNI 451 LV G L DI E K+ E+ Q TL + E L+ Sbjct: 676 RLVYDEQGKSLRIDGINSDITERKQAEEQLQYNATHDTLTQLPNRLLFMDRLEHALERRR 735 Query: 452 FSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD 511 D L+ ++V + + + I LQ D Sbjct: 736 RYSDPLFAVLF----LDLDEFKVINDSLGHALGDELLREIARRLQKSLRADDTLARLGGD 791 Query: 512 GIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCI 571 + + V + ER I+ D+T L + + Sbjct: 792 EFTILLEEIHDVKDAIKIAER---IHKDLTRPFNLEGQ---------EIFTNTSIGIALS 839 Query: 572 DMA 574 + Sbjct: 840 NGE 842 Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 35/258 (13%), Positives = 86/258 (33%), Gaps = 16/258 (6%) Query: 420 TEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECV 479 + Q +++ + I L+ ++ +L Q+ + Sbjct: 100 SHQELKRVNPHFQNIFNQAKVAIALVNLQGKFVQVNQAFCDLIGYTSQELIKLQL-SKIT 158 Query: 480 LPEDRQHAEKVIRDSLQS-RSPFKLEFRITVKDGIRHI-RALANRVLNKEGEVERLLGIN 537 PE+R + + L++ F E R KDG + + + ++ + + + I Sbjct: 159 HPEERLSDSQWLNQLLKNSCEAFSREKRYVKKDGSIIWGQVTVSVMKDQAKKPQYFIVII 218 Query: 538 MDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALG 597 +++ ++ + + + +NPV E++ G++ E L Sbjct: 219 NAISDRQETERHRDR-------FFVMSLDLLCIAGFDGYFKTLNPVFERILGYSSRELLA 271 Query: 598 VPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGS 657 P + +H + + + + I + CR G + ++ P Sbjct: 272 QPFIEFIHPDDRSTS--LAELANLRQGKETIHFENRYRCRDGSYRWLSWTSAPYMEEK-- 327 Query: 658 NIGSVLVIQDVTESRKML 675 V +D+TE +K+ Sbjct: 328 --LIYAVARDITEEKKIE 343 Score = 84.4 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 22/199 (11%), Positives = 57/199 (28%), Gaps = 49/199 (24%) Query: 543 VKQLNEALFQEKER----LHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGV 598 + + QE +R + A+ +++ K +N + G+T +E + Sbjct: 93 RRMNIQPSHQELKRVNPHFQNIFNQAKVAIALVNLQGKFVQVNQAFCDLIGYTSQELI-- 150 Query: 599 PLLTVLHITFGDNGPLMENIYSADTSR--SAIEQDVVLHCRSGGSYDVHYSITPLSTLDG 656 L + IT + + A ++ + G +++ + Sbjct: 151 -KLQLSKITHPEERLSDSQWLNQLLKNSCEAFSREKRYVKKDGSIIWGQVTVSVMKDQAK 209 Query: 657 SNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHAL 716 +++I +++ ++ R + Sbjct: 210 KPQYFIVIINAISDRQETE---------------------------------RHRDRFFV 236 Query: 717 VFIDL------DR-FKAVN 728 + +DL D FK +N Sbjct: 237 MSLDLLCIAGFDGYFKTLN 255 >UniRef50_Q60BD0 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q60BD0_METCA Length = 1214 Score = 872 bits (2253), Expect = 0.0, Method: Composition-based stats. Identities = 168/880 (19%), Positives = 320/880 (36%), Gaps = 43/880 (4%) Query: 238 IFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHI 297 IF + + + D ++ + + L + + + +AER+ + Sbjct: 350 IFAALGLEIDAAVRRDRVAAYRVVAIAIALLIAMGTLGFEVSRQRLWLSSRIAKAERRRL 409 Query: 298 SESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQE-ELRGLT--FQQLTWPE 354 +E++ R +G + + ++ + G + E+ F L PE Sbjct: 410 AEAQRLAR-------VGSWVYDPATDRMTWSEETYRIFGLPFDGEVPHRYQEFAALFVPE 462 Query: 355 DLNKDLQQVEKLISGEINTYSME--KRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIE 412 D + G + +E +G V V L + ++ Sbjct: 463 DRELIEAALRG---GRDDLLGVERPLCVRRADGAVRQVNFKVELQGRRGDSGPVLQGTLQ 519 Query: 413 DINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNW 472 D+ E E+ +Q ER+ L E + + EW+L + W+ ++ Sbjct: 520 DVTERWEAERALRQSEERLRLHVEHLPLAVIEWDLDFIVSRWNPAAERIFGYGADRMIGR 579 Query: 473 QVWYECVLPED-RQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVE 531 + PED + AE + R+ + +T + +G V Sbjct: 580 SA--GILFPEDVLEQAEAIWREVSGGSGNRVVTANVTADGRTIRCEWYNTPLTTPDGTVI 637 Query: 532 RLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWT 591 + + D+T + + L T + EA++ +I +N +++G+ Sbjct: 638 GVASLVDDITRREAVEAEL----RLAATTFE-TDEAILIAGADGRILRVNAAFSRITGYR 692 Query: 592 QEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPL 651 QE+ +G + ++ + + ++ ++G Y +IT + Sbjct: 693 QEDVVGRNPRLFK--SGLHGAEFYREVWRSLEQTGRWQGEIWNRRKNGEVYPERKTITAV 750 Query: 652 STLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTH 711 + +G V + D++E ++ ++ A +D+LT L NR+ ++L ++ Sbjct: 751 RSANGDITHYVAISSDISELKRTEEKIRQLAYYDSLTGLPNRSLIFERLTQQMKAARREG 810 Query: 712 QRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLL-- 769 AL+F+DLD FK +NDS GH GD LL ++A + + L + ARLGGDEF +LL Sbjct: 811 TYGALLFMDLDYFKTLNDSLGHHMGDRLLVQVAERLKNCLEDEEAAARLGGDEFVVLLAP 870 Query: 770 ----PDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQA 825 A A R+ ++ F + VH + S GI L D + A +V+ QA Sbjct: 871 AKPSASVAAGQAIVHARRVRELLSA-PFQLDDYVHYISVSIGIALFPDGANTAEDVLKQA 929 Query: 826 DIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPE 885 D A Y +KN GR V YE A R + + + + ++ + + + Sbjct: 930 DTAMYVAKNEGRDGVRFYESAMEAVVRGRLELEKALR-KALANDEFEVYYQPQM---LGD 985 Query: 886 ARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAA--KAVASKG 942 R + +L W E I F + + V A +A Sbjct: 986 GRVVGAEALIRWFHPERGAISPDQFIPVCEQNGMILRVGAIVLRRACACLAEIRARGLAL 1045 Query: 943 ISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRL 998 +S+ +S + L+ L + + + P L L + +L+H E + +L+ Sbjct: 1046 PKLSVNVSPRQFMRSDLMTQLEQFCLENGVSPTDLCLELTEGVLLNHTELAVAQIGRLKN 1105 Query: 999 AGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGM 1058 G + G LK D L + +++ + D ++ I A+ LG+ Sbjct: 1106 LGVSFSIDDFGTGYSSLAYLKHLPLDDLKIASAFVRDLEQDSSDAAIVETIVSMARHLGL 1165 Query: 1059 KTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 IA V ++ L G G A P D + Sbjct: 1166 DVIAEGVETRTQVEILERYGCHRFQGNYFARPLPKDDFIR 1205 >UniRef50_Q47ED8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47ED8_DECAR Length = 827 Score = 871 bits (2252), Expect = 0.0, Method: Composition-based stats. Identities = 167/700 (23%), Positives = 296/700 (42%), Gaps = 16/700 (2%) Query: 410 QIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIK 469 + + E K T Q R ++A +GI+ ++ + ++ + Sbjct: 120 TLRYLIERKTTRQALTLSEARFRAMSDASPLGIFVSDIHGECVYTNAAYHKISGLNLEQT 179 Query: 470 PNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGE 529 W + P+DRQ R + + F+ E R DG L + Sbjct: 180 LGTN-WSMAIHPDDRQRVLLEWRAAALGEATFQTEARFLRADGSIVWARLNAAAMLDGLH 238 Query: 530 VERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSG 589 + + D++E K +ALF+EKER +TL+SIG+AV+ ++ +T++N VAE M+G Sbjct: 239 LRGHVQTVEDISERKITEDALFEEKERAQVTLNSIGDAVLTTNLKGDVTYLNLVAEMMTG 298 Query: 590 WTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQ---DVVLHCRSGGSYDVHY 646 W +E A+G PL V I G + N + D +L R G + Sbjct: 299 WPREAAIGQPLSEVFRILNGTTREVAPNPAQLAIRENRTVGLAADSILIHRDGLEAAIED 358 Query: 647 SITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQT 706 S P+ DG G+V+V DV+ESR M ++++ A HD LT L NRA ++L + Sbjct: 359 SAAPIHNRDGQVAGAVIVFHDVSESRAMALKMAHLAQHDFLTGLPNRALLTERLSRAIGQ 418 Query: 707 VNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFG 766 ++R ++F+DLD FK +NDS GHA GD LL+++A ++ +R +D + R GGDEF Sbjct: 419 ARRHNKRVGMLFLDLDYFKHINDSLGHAVGDQLLQQVAERLIVCIRDTDTVCRQGGDEFV 478 Query: 767 LLLPDCN-VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQA 825 +LL + A IA ++++A + + G V S GI++ D+ A VM A Sbjct: 479 ILLAEIEQARDAAPIAEKLLAAFAE-PCLIAGNELHVSLSIGISIYPDDGMDADTVMKNA 537 Query: 826 DIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPE 885 D A Y +K GR + + R + + + R +++ + M+ + Sbjct: 538 DTAMYHAKANGRNNYQFFTTEMNTRAVRRLFIEGNLR-RALRQGEFMLYYQPKID--LAS 594 Query: 886 ARNLWLISLKLWS-CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK--G 942 + +L W E ++ + F + L + V E +Q S Sbjct: 595 GMMIGSEALIRWQDPEHGLVYPKQFVPIAEESGLIVPIGSWVLREACRQVRAWQESGLVA 654 Query: 943 ISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRL 998 + +S+ +S + + L+ + + P L L + ++ AES ++ L+ Sbjct: 655 VPVSVNISAVEFRHKDFLEGVALILKETGMLPSYLELELTESILMHDAESSATVLEALKT 714 Query: 999 AGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGM 1058 G ++ + G + LK + L +D ++ + D ++ + G + L Sbjct: 715 MGMQLAIDDFGTGYSSLSYLKRFPINTLKIDQSFVHDIAIDPDDASIVGAMIGMGKNLKQ 774 Query: 1059 KTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 + +A V + L + D G + P D Sbjct: 775 RVVAEGVETEEQLAFLRTLHCDEGQGFLFGRPLPADEFAR 814 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 58/336 (17%), Positives = 119/336 (35%), Gaps = 13/336 (3%) Query: 225 WSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMT 284 + A + + A ++ YL+ + +L L I Sbjct: 68 IAVFEQVSRLAANALILILSSADDEEVARLAVQNGADDYLVKGLVDAHWLPRTLRYLI-- 125 Query: 285 MVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRG 344 + R+ ++ SE FR + S +G+ + G+ + TN A + G + E+ G Sbjct: 126 ----ERKTTRQALTLSEARFRAMSDASPLGIFVSDIHGECVYTNAAYHKISGLNLEQTLG 181 Query: 345 LTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTP 404 + P+D + L + GE T+ E R+ +G +VWA L + + Sbjct: 182 TNWSMAIHPDDRQRVLLEWRAAALGEA-TFQTEARFLRADGSIVWARLNAAAMLDGL-HL 239 Query: 405 LYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI 464 + +EDI+E K TE + ER + + G + LK ++ + + Sbjct: 240 RGHVQTVEDISERKITEDALFEEKERAQVTLNSIGDAVLTTNLKGDVTYLNLVAEMMTGW 299 Query: 465 PPHIKPNW--QVWYECVLPEDRQHAEKVIRDSLQSRSPFKL---EFRITVKDGIRHIRAL 519 P + + R+ A + +++ L I I Sbjct: 300 PREAAIGQPLSEVFRILNGTTREVAPNPAQLAIRENRTVGLAADSILIHRDGLEAAIEDS 359 Query: 520 ANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKE 555 A + N++G+V + + D++E + + + + Sbjct: 360 AAPIHNRDGQVAGAVIVFHDVSESRAMALKMAHLAQ 395 Score = 89.7 bits (222), Expect = 6e-16, Method: Composition-based stats. Identities = 40/347 (11%), Positives = 97/347 (27%), Gaps = 44/347 (12%) Query: 221 VLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPA 280 VLL W A L S++ A + +L H+ + Sbjct: 196 VLLEWRAAALGEATFQTEARFLRADGSIVWARLNAAAMLDGLHLRGHVQTV--------- 246 Query: 281 NIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQE 340 + + + E + + + + +G N G+ +E Sbjct: 247 ----EDISERKITEDALFEEKERAQVTLNSIGDAVLTTNLKGDVTYLNLVAEMMTGWPRE 302 Query: 341 ELRGLTFQQLT-----WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVS 395 G ++ ++ + Q+ + + + +R+G + + Sbjct: 303 AAIGQPLSEVFRILNGTTREVAPNPAQL-AIRENRTVGLAADSILIHRDGLEAAIEDSAA 361 Query: 396 LVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWD 455 + + DG + D++E + L + L + Sbjct: 362 PIHNRDGQVAGAVIVFHDVSESRAMALKMAHLAQHDFLTGLPNRALL------------T 409 Query: 456 KRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRH 515 +R+ + N +V + + +H + ++ + ++ R+ I Sbjct: 410 ERLSRAIGQAR--RHNKRVGMLFLDLDYFKHINDSLGHAVGDQLLQQVAERL-----IVC 462 Query: 516 IRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLD 562 IR E LL E++Q +A ++ L + Sbjct: 463 IRDTDTVCRQGGDEFVILLA------EIEQARDAAPIAEKLLAAFAE 503 >UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WUG6_METML Length = 836 Score = 871 bits (2252), Expect = 0.0, Method: Composition-based stats. Identities = 136/706 (19%), Positives = 283/706 (40%), Gaps = 30/706 (4%) Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPN 471 + + R++ A + ++ ++ ++ + ++ Sbjct: 143 TRVQQRTAELTSALNQSHRLSEALDHIPAFVYIKDINGKYVYANRMTLDFFKCSVDDLVQ 202 Query: 472 WQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFR-ITVKDGIRHIRALANRVLN--KEG 528 + + V + ++ E ++ D R + + + Sbjct: 203 IDEGKYFS-ARTLEKSRSVDKSVIERGEDACEEIEAVSDDDKKRTFLQIKTPIYENEADR 261 Query: 529 EVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMS 588 ++ L GI+ D+T +K +L +S + ++ D I +N ++ Sbjct: 262 KIWGLCGISTDITALKNAETSL----RIAATAFESS-DGILITDAGCSILQVNSAFTTIT 316 Query: 589 GWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSI 648 G++ E+ +G + + + + ++ + ++ ++G Y +I Sbjct: 317 GYSAEDVVGKNPRIL--SSGRHDQLFYQALWDRVNTTGTWCGEIWNRRKNGDIYPERITI 374 Query: 649 TPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVN 708 + + DG V V D++ES+ Q+ + A +D LT+L NR ++R + + Sbjct: 375 SEVKDKDGKVTNYVSVFTDISESKASSEQIEHLAFYDPLTNLPNRLLLLDRVRQAFSSSS 434 Query: 709 STHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLL 768 T ++ AL+F+DLD FK +ND+ GH+ GD LL+ A + +R+ D +AR GGDEF ++ Sbjct: 435 RTGKKGALLFVDLDHFKVLNDTLGHSTGDLLLKLQAERLSHCVRAGDTVARFGGDEFVVV 494 Query: 769 LPDCNVE--SARFIAT----RIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVM 822 L D + A IA +I+S +++ + ++ +S GITL + H+ +++ Sbjct: 495 LEDLDRNATEAAAIAEQIGNKILSTLHE-PCQFGTHQYQSTSSIGITLFSGDEHEIEDLL 553 Query: 823 SQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPR 882 QADI+ Y +K GR + ++P S RA++ + ++ I++ QL + Sbjct: 554 KQADISMYQAKKAGRNTLRFFDPAMQEKLSVRASLESELRY-AIEKQQLALYYQVQVD-- 610 Query: 883 IPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS- 940 R + +L W E + F + AL + V + Q A+ S Sbjct: 611 -DNQRMVGAEALIRWIHPERGTVSPIEFIPIAEESALILDVGHWVINTACMQLAEWAKSV 669 Query: 941 --KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQ 994 K + I++ +S + V + ++ + L L + IL+ + + Sbjct: 670 EKKHLMIAVNVSAHQFRALDFVQSTQQAIDLHKIDASRLKLELTESVILEDVDDVIAKMH 729 Query: 995 KLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQ 1054 L+ G ++ L G + LK D + +D ++ + D +++ I A Sbjct: 730 ALKALGVKLSLDDFGTGYSSLSYLKKLPLDQVKIDQSFVRDLAYDPNDAIMVKTIIDLAN 789 Query: 1055 RLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNSS 1100 + IA V L +D L G G L G + P++ L ++ Sbjct: 790 NFRINVIAEGVETELELDILKGYGCRLYQGYLFGRPVPIEQLQFAA 835 Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 83/254 (32%), Gaps = 8/254 (3%) Query: 282 IMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEE 341 ++ + A + + + A E S G+ + LQ N A GYS E+ Sbjct: 268 GISTDITALKNAETSLRIA----ATAFESS-DGILITDAGCSILQVNSAFTTITGYSAED 322 Query: 342 LRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTD 401 + G + L+ Q + + T+ E +NGD+ + +S V+ D Sbjct: 323 VVGKNPRILSSGRHDQLFYQALWDRV-NTTGTWCGEIWNRRKNGDIYPERITISEVKDKD 381 Query: 402 GTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFEL 461 G +++ DI+E K + + + L L + + FS R + Sbjct: 382 GKVTNYVSVFTDISESKASSEQIEHLAFYDPLT--NLPNRLLLLDRVRQAFSSSSRTGKK 439 Query: 462 YEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALAN 521 + +++V + + K+ + L D + + Sbjct: 440 GALLFVDLDHFKVLNDTLGHSTGDLLLKLQAERLSHCVRAGDTVARFGGDEFVVVLEDLD 499 Query: 522 RVLNKEGEVERLLG 535 R + + +G Sbjct: 500 RNATEAAAIAEQIG 513 Score = 125 bits (315), Expect = 9e-27, Method: Composition-based stats. Identities = 50/416 (12%), Positives = 118/416 (28%), Gaps = 39/416 (9%) Query: 160 VLSESIGALALVPLGLLFKPHYLLRH-RNPRLLFESLLTLAITLTLSWLS--MLYLPWPF 216 ++ G +L+P G + L +L +I L + + +P+ + Sbjct: 3 WFGQTFGEQSLLPHGFCLTWNPSLLWTMVVSDAVIALSYFSIPFGLWYFAKKRPDIPYRW 62 Query: 217 TFIIVLLMWSAVRLPR----------------MEAFLIFLTTVMMVSLMMAADPSLLATP 260 ++ + A + + + + P L P Sbjct: 63 LMVVFGVFIVACGVTHIFDIVNIWYPSYWASAYAKAFTGVVSFATAVAVWWIMPLALKAP 122 Query: 261 RTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESET---HFRNAMEYSAIGMAL 317 + +L A + + ++ + A+++ + + Sbjct: 123 SAQSLQ-------VLNQALARSHAELETRVQQRTAELTSALNQSHRLSEALDHIPAFVYI 175 Query: 318 VGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSME 377 G+++ N+ F S ++L + + L K + +I + E Sbjct: 176 KDINGKYVYANRMTLDFFKCSVDDLVQIDEGKYFSARTLEKSRSVDKSVIERGEDACE-E 234 Query: 378 KRYYNRNGDVVWALLAVSLVR--HTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLAN 435 + + L + + D DI LK E + Sbjct: 235 IEAVSDDDKKRTFLQIKTPIYENEADRKIWGLCGISTDITALKNAETSLRIAATAFE--- 291 Query: 436 EAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSL 495 GI + +I + + D Q + + D + Sbjct: 292 --SSDGILITDAGCSILQVNSAFTTITGYSAEDVVGKNPRILSSGRHD-QLFYQALWDRV 348 Query: 496 QSRSPFKLEFRITVKDGIRHI-RALANRVLNKEGEVERLLGINMDMTEVKQLNEAL 550 + + E K+G + R + V +K+G+V + + D++E K +E + Sbjct: 349 NTTGTWCGEIWNRRKNGDIYPERITISEVKDKDGKVTNYVSVFTDISESKASSEQI 404 Score = 47.4 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 17/146 (11%), Positives = 40/146 (27%), Gaps = 4/146 (2%) Query: 536 INMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEA 595 + + + + + RL LD I V D+ K + N + + ++ Sbjct: 141 LETRVQQRTAELTSALNQSHRLSEALDHIPAFVYIKDINGKYVYANRMTLDFFKCSVDDL 200 Query: 596 LGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLS--T 653 + + + ++ S +++ TP+ Sbjct: 201 VQIDEGKYFSARTLEKSRSVDK--SVIERGEDACEEIEAVSDDDKKRTFLQIKTPIYENE 258 Query: 654 LDGSNIGSVLVIQDVTESRKMLRQLS 679 D G + D+T + L Sbjct: 259 ADRKIWGLCGISTDITALKNAETSLR 284 >UniRef50_B1Y6A9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y6A9_LEPCP Length = 898 Score = 871 bits (2251), Expect = 0.0, Method: Composition-based stats. Identities = 189/859 (22%), Positives = 329/859 (38%), Gaps = 49/859 (5%) Query: 276 ILLPANIMTMVMYAFRAERKHISESETH-------FRNAMEYSAIGMALVGTEGQWLQTN 328 +L + + +R + ++ + M+ + + +G+ Q N Sbjct: 44 LLAGSEQAESMFVQLERQRNALRDAHGREQALSAFAQRVMDTVGGVVIALDPQGRLRQRN 103 Query: 329 KALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQV----EKLIS------GEINTYSMEK 378 + L E G + L P+DL + ++ S Y E Sbjct: 104 RHCQNDL-APLPE--GSSVDLLLHPQDLAALEAALPHLPWQVHSVLFETVRRQGGYRAEH 160 Query: 379 RYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAG 438 ++ R+G + L+ +++ + DI+ELKR EQ + R A Sbjct: 161 QFAMRDGSYRYHLVEAAMLYSAQNKEEGAVLSGTDISELKRQEQHLRASDARFNQAEHVA 220 Query: 439 GIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQ----------VWYECVLPEDRQHAE 488 +G W+ +W M +++I + + V P++R Sbjct: 221 RVGSWDLVPHTGAMTWSVEMARIFDITAQPHASHDAAGASVYSQADFLAAVHPDERARVV 280 Query: 489 KVIRDSLQSRSPFKLEFRITVKDGIR-HIRALANRVLNKEGEVERLLGINMDMTEVKQLN 547 + P +EFRI G + + +G R +G D+TE +Q Sbjct: 281 AAQAAASAEHRPCDIEFRIVTSGGKMKWVHLRSTTFHGDDGRPLRSVGTVQDITERRQAE 340 Query: 548 EALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHIT 607 + + D+ A++ D +I +N ++G+T EEA+G + + Sbjct: 341 DEM----RLAASVFDNSLNAILIADANGRIRKVNRAFTAITGYTAEEAVGDTPRLMK--S 394 Query: 608 FGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQD 667 + +++ + + +++ C+ G V SI + G+ + + D Sbjct: 395 GLHSPGFYGEMWAELQACGKWDGELMNQCKDGRIISVRESIAAVHDPAGAVAYYIGIFHD 454 Query: 668 VTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAV 727 +TE + +++ A +D LT L NRA + + L +R A++F+DLDRFK + Sbjct: 455 ITEQKASAQRIHQLAYYDVLTGLPNRALLMDRCQHELARAMRDGKRLAVLFLDLDRFKHI 514 Query: 728 NDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNV-ESARFIATRIIS 786 NDS GH GD LLR +A + LR SD +ARLGGDEF +LL A RI+ Sbjct: 515 NDSLGHPVGDGLLRAVAQRLQGTLRDSDTIARLGGDEFIVLLEHVETSAGVELAARRILD 574 Query: 787 AVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQ 846 A D F E VGAS GI+L D+ + AD+A Y +K GRG +EP+ Sbjct: 575 AFRD-PFQLEEHRLSVGASVGISLFPDHASDITSLFKYADLALYQAKAAGRGDFRFFEPR 633 Query: 847 QAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIID 905 A +R + + + + ++ NQL + V + +P+ R +L W + Sbjct: 634 FNDAAKDRMRLERELR-QALERNQLSLQYQPVFA--LPDGRLAGAEALLRWTHPALGSVS 690 Query: 906 EQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK--GISISLPLSVAGLSSATLVNDL 963 TF D L + V + +QA + + + I++ LS + LV+ + Sbjct: 691 PATFIPIAEDSGLIVPIGAWVLEQACRQARQWLDAGLDPGVIAVNLSGMQIQRNDLVDTV 750 Query: 964 LEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLSQVGRDLQIFNSLK 1019 L + LP L L I I HAE + +LR G + + G L+ Sbjct: 751 SSVLARTGLPACHLELEISESYITRHAESDLQRLGQLRALGVSMAIDDFGTGQTSLGHLR 810 Query: 1020 ANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGV 1079 L +D A+++ + + I G LG+ +A V L Sbjct: 811 RLPVSKLKIDRSFMADIEHDAAAAAVTRAIIGLGHGLGLTVVAEGVESAAQESALVAQHC 870 Query: 1080 DLIYGEVIADAQPLDLLVN 1098 DL+ G A + Sbjct: 871 DLVQGFRYARPLDAPVFAA 889 >UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=3 Tax=Neisseriaceae RepID=C1DBY5_LARHH Length = 839 Score = 870 bits (2249), Expect = 0.0, Method: Composition-based stats. Identities = 130/578 (22%), Positives = 234/578 (40%), Gaps = 14/578 (2%) Query: 529 EVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMS 588 E E + + + E + Q ++ E ++ D I +NP +++ Sbjct: 256 EHEYVHELQYALKERDEALNLSQQNLRLADKVFEATLEGIIITDAEGIIETVNPAFTRIT 315 Query: 589 GWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSI 648 GW +EE +G + + +++ + + +V+ + G Y H +I Sbjct: 316 GWRREEVVGKNPRIL--SSSQQPPEFYRHLWQSLREHGFWQGEVINRRKDGKFYTEHLTI 373 Query: 649 TPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVN 708 T + DG+ + D+T+ + +L Y A+HD LT L NR ++L L + Sbjct: 374 TGIRGPDGTFTHYAGIFSDITQRKLNEERLHYLANHDPLTDLPNRTLLMERLGAALTRAH 433 Query: 709 STHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLL 768 +R AL+F+DLDRFK +ND+ GHA GD LL+ +AS + LR+SD +ARLGGDEF ++ Sbjct: 434 RQGKRVALMFLDLDRFKFINDTLGHAVGDKLLQTVASRLTGSLRASDTVARLGGDEFNIV 493 Query: 769 LPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADI 827 L D ++ A ++I V +G V AS GI + D+ + AD Sbjct: 494 LEDIRDLRGVAQTAQKLIDRVQGM-VTLDGHDVYVTASVGIAIYPDDGSTPEVLRMNADT 552 Query: 828 ACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEAR 887 A Y +K G+ + A+ R + + R + + + + Sbjct: 553 AMYRAKERGKNNFQFFTADMNASTLARLRLESNL-HRALARQEFQLHFQPKVD--LAHGH 609 Query: 888 NLWLISLKLWS-CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGI--S 944 + +L W E + F + L + V + +QA + + + Sbjct: 610 IYGMEALLRWRSHELGPVSPADFIPIAEESNLISTIGEWVLEQACRQARHWLNLGLLPGT 669 Query: 945 ISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH----AESVQKLRLAG 1000 +++ LS ++ +V + LE+S LP L L I +D+ +++ L+ G Sbjct: 670 VAVNLSSKQMTQGDIVATVRRILEHSNLPGHYLELEITESVAMDNTGEMIRTLKNLKALG 729 Query: 1001 CRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKT 1060 RI + G + LK D L +D ++ + D + + I Q L ++ Sbjct: 730 VRIAIDDFGTGYSSLSYLKQLPIDVLKIDRSFVTDLHEDRDDAAIASAIISMGQSLNLQP 789 Query: 1061 IAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 +A V L G G + + P + Sbjct: 790 VAEGVEREEHRQFLLDHGCQYGQGYLFSRPVPAATMEQ 827 Score = 145 bits (368), Expect = 7e-33, Method: Composition-based stats. Identities = 46/292 (15%), Positives = 99/292 (33%), Gaps = 11/292 (3%) Query: 254 PSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNA---MEY 310 L T ++ + ++ + + + YA + + ++ S+ + R A E Sbjct: 231 RHLGITSENNQLTGLVGFADIMASIEHEYVHELQYALKERDEALNLSQQNLRLADKVFEA 290 Query: 311 SAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGE 370 + G+ + EG N A + G+ +EE+ G + L+ + + + + + + E Sbjct: 291 TLEGIIITDAEGIIETVNPAFTRITGWRREEVVGKNPRILSSSQQPPEFYRHLWQSLR-E 349 Query: 371 INTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMER 430 + E ++G L ++ +R DGT ++ DI + K E+ L Sbjct: 350 HGFWQGEVINRRKDGKFYTEHLTITGIRGPDGTFTHYAGIFSDITQRKLNEERLHYLANH 409 Query: 431 ITLANEAG------GIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDR 484 L + +G +L + +L Sbjct: 410 DPLTDLPNRTLLMERLGAALTRAHRQGKRVALMFLDLDRFKFINDTLGHAVGDKLLQTVA 469 Query: 485 QHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGI 536 +R S EF I ++D IR +R +A V+ ++ + Sbjct: 470 SRLTGSLRASDTVARLGGDEFNIVLED-IRDLRGVAQTAQKLIDRVQGMVTL 520 >UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NQ51_9DELT Length = 751 Score = 869 bits (2246), Expect = 0.0, Method: Composition-based stats. Identities = 140/721 (19%), Positives = 271/721 (37%), Gaps = 21/721 (2%) Query: 389 WALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELK 448 W +++ ++ G + I + R E ++ ER E IWE + Sbjct: 39 WDQESLTAMQTYKGWFYVAVTAILVFFLVLRAEYRFRRTEERFRNLTETSNDWIWEVDTS 98 Query: 449 PNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFK--LEFR 506 + ++ L P + + + + + + + Sbjct: 99 GSYTYVSPQVKTLLGYRPDEVIGRTPF-DFMPSGEAERVRDRFAAISAEQEAIINLVNTN 157 Query: 507 ITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGE 566 + + + ++ G + GI+ D+T +QL E L Q + +++ E Sbjct: 158 LHRQGRRVILETSGVPFYDQHGTWQGYRGIDRDITVRQQLEEWLRQS----AMVYENMWE 213 Query: 567 AVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRS 626 V D A I +NP +++G+ ++E +G + + ++++ + Sbjct: 214 GAVITDPAGTILDVNPAFSRITGYAKDEVIGKNPRILK--SDRHEQAFYQHMWRELIEKG 271 Query: 627 AIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDA 686 ++ ++G Y SI+ +S G V V D+++ ++ +L A +D Sbjct: 272 QWRGEIWNRRKNGEVYPEWLSISGVSDARGQTSYYVGVFTDLSQLKQSEAKLESLAYYDP 331 Query: 687 LTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASL 746 LT L NR +L L+ + + FIDLD+F+ VN+S + AGD LL ++ Sbjct: 332 LTALPNRLLLHSRLEHALEWAERHQTKVGVYFIDLDQFRVVNESLSYQAGDQLLVMVSKR 391 Query: 747 MLSMLRSSDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWE-GRVHRVGA 804 LS LR D LAR GGDEF L+ + + A A ++++++ F + G+ +GA Sbjct: 392 FLSCLRVDDTLARPGGDEFVLIQEALADPQEATETARELLASLDQ-PFQLDGGQEIYLGA 450 Query: 805 SAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWR 864 S GIT+ + +++ A+ A Y +K GR R + Y Q A R M + + + Sbjct: 451 SIGITVFPGDGTTPPDLLKNAEAAMYHAKENGRNRFSFYAEQMNADALARLQMEMALR-Q 509 Query: 865 MIKENQLMMLAHGVASPRIPEARNLWLISLKLWS-CEGEIIDEQTFRRSFSDPALSHALD 923 ++ +L++ + +L W EGE+I F L A+ Sbjct: 510 AVENRELLLYYQPQWQL-ADSPSVIGAEALIRWRNKEGELIAPDQFIPLAEKSGLIGAIG 568 Query: 924 RRVFHEFFQQAAKAVASK--GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLII 981 V E +Q + +++ +S + L + + L +P L + Sbjct: 569 DWVIDEACRQLRIWRDQGKKQLRVAVNVSARQFRAGNLAEVVAQALRKHEIPAHCFELEL 628 Query: 982 PAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQ 1037 +++ E + + G I L G L L +D ++ Sbjct: 629 TESILMEKPEEAAELLNRCAALGVGIALDDFGTGYSSLAYLSRFPITVLKIDRSFVRDLN 688 Query: 1038 GNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 ++ I A R+G++ +A V L G DL G + + P + Sbjct: 689 HRSEAALIADSIIALAHRMGLQVVAEGVETEEQRAYLQSRGCDLAQGFLFSPPLPAEQFA 748 Query: 1098 N 1098 Sbjct: 749 E 749 Score = 155 bits (393), Expect = 8e-36, Method: Composition-based stats. Identities = 47/335 (14%), Positives = 106/335 (31%), Gaps = 18/335 (5%) Query: 219 IIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAA--DPSLLATPRTYLMSHMPWLPFLLI 276 + + A+RL + A L L++A D L +TY + +L+ Sbjct: 4 LSNPQIRYALRLAAVYALFGLLWIFFSDRLVLAISWDQESLTAMQTYKGWFYVAVTAILV 63 Query: 277 LLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLG 336 ++++E S + V T G + + + LG Sbjct: 64 FFLVLRAEYRFRRTEERFRNLTE----------TSNDWIWEVDTSGSYTYVSPQVKTLLG 113 Query: 337 YSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSL 396 Y +E+ G T + + + + + + ++ +R G V + Sbjct: 114 YRPDEVIGRTPFDFMPSGEAERVRDRFAAISAEQEAIINLVNTNLHRQGRRVILETSGVP 173 Query: 397 VRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDK 456 GT + DI ++ E+ +Q + E G + I + Sbjct: 174 FYDQHGTWQGYRGIDRDITVRQQLEEWLRQSA----MVYENMWEGAVITDPAGTILDVNP 229 Query: 457 RMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHI 516 + ++ + + R+ ++ ++ E K+G + Sbjct: 230 AFSRITGYAKDEVIGKNPRILKSDRHEQAFYQHMWRELIEKGQ-WRGEIWNRRKNGEVYP 288 Query: 517 RALANR-VLNKEGEVERLLGINMDMTEVKQLNEAL 550 L+ V + G+ +G+ D++++KQ L Sbjct: 289 EWLSISGVSDARGQTSYYVGVFTDLSQLKQSEAKL 323 Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 67/193 (34%), Gaps = 3/193 (1%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + R+ + E E G + G L N A + GY+++E+ G Sbjct: 187 IDRDITVRQQLEEWLRQSAMVYENMWEGAVITDPAGTILDVNPAFSRITGYAKDEVIGKN 246 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 + L Q + + + E + E +NG+V L++S V G Y Sbjct: 247 PRILKSDRHEQAFYQHMWRELI-EKGQWRGEIWNRRKNGEVYPEWLSISGVSDARGQTSY 305 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP 466 ++ D+++LK++E + L L + + W +R + Sbjct: 306 YVGVFTDLSQLKQSEAKLESLAYYDPLTALPNRLLLHSRLEHA--LEWAERHQTKVGVYF 363 Query: 467 HIKPNWQVWYECV 479 ++V E + Sbjct: 364 IDLDQFRVVNESL 376 >UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultured bacterium RepID=Q20JY5_9BACT Length = 874 Score = 869 bits (2245), Expect = 0.0, Method: Composition-based stats. Identities = 181/779 (23%), Positives = 307/779 (39%), Gaps = 48/779 (6%) Query: 346 TFQQL---TWPEDL------NKDLQQVEKLISGEINTYSMEKRYYNR--NGDVVWALLAV 394 + + P Q++ +L S + + E + + + V Sbjct: 106 NPRDIAPRIPPAHKLLYIQKPFHPQEIHQLASALSSKWRTEHEFQKVFEDLERRIEDRTV 165 Query: 395 SLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSW 454 L+ + +E+I+E KR E+ +Q + A E +GI +L I Sbjct: 166 ELM---NMNEHLIEELLEEIDERKRAEKHLRQ----LKQAVETMQLGITITDLDRKIIYM 218 Query: 455 DKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIR 514 + E++ V V PE R+ + + + + I Sbjct: 219 NPAGAEMHGYQVEELLGQDVSM-FVPPEHRKPL--TLERIKEWKGLIRESVNIRKDGTTF 275 Query: 515 HIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMA 574 + ++ V N +GE ++ D+TE KQ EAL + +ER I L+S + VV D Sbjct: 276 LVWLMSEIVKNAKGEPFAIVTSCEDITERKQAEEALRKSEERYRIVLESAPDPVVVYDTE 335 Query: 575 MKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVL 634 K+ + NP ++ GWT +E++G + + +N + E I T + Sbjct: 336 GKVAYFNPAFSRVFGWTLDESIGRNIDFLPVENVPENKLIFEKINCGKTLSGI---ETYC 392 Query: 635 HCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRA 694 + G V+ S GS++ +QD+TE +K ++ + A HD LT L NR Sbjct: 393 LTKDGKKVGVNISGAGFFDNHDKLQGSIITLQDITERKKTEEEIKFLAYHDVLTGLLNRK 452 Query: 695 SFEKQLRILLQTV------NST--HQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASL 746 SF +L L + AL F+D+DRFK VND+ GH GD LL+ +A Sbjct: 453 SFYTRLEDELIRSYSYDGDRRRIKGHKWALFFLDVDRFKYVNDTLGHDVGDELLKVVAVR 512 Query: 747 MLSMLRSSDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGAS 805 + + LR SD + RLGGDEF ++L D + +A +I A+ + + S Sbjct: 513 LKNCLRKSDYIFRLGGDEFTIILNDLTDDTDMAKVAQKIRKAIAR-PCRIKDHELYITVS 571 Query: 806 AGITLIDDNNHQAAEVMSQADIACYASKNGGRG-RVTVYEPQQAAAHSERAAMSLDEQWR 864 GI++ D+ ++ ADIA YA+K + + ER + + + Sbjct: 572 IGISIYPDDGDDVETLVKNADIAMYAAKEE--NQGYRFFIEEMNRKTLERMMLENNLR-N 628 Query: 865 MIKENQLMMLAHGVASPRIPEARNLWLISLKLWS-CEGEIIDEQTFRRSFSDPALSHALD 923 ++ +QL++ + + + + +L W E +I F + L + Sbjct: 629 ALQHDQLIIYYQPLVD---STNQIVGMEALLRWHHPELGLISPSQFIPLAEETGLIVPIG 685 Query: 924 RRVFHEFFQQAAKAVASKGIS--ISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLII 981 + V QQA K +++ LSV LV + + LE + LPP L L + Sbjct: 686 KWVLRCACQQARKWHEMGYTRFYVAVNLSVRQFREPDLVETIEQILEATDLPPDCLKLEV 745 Query: 982 PAEAILDHAE----SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQ 1037 I++H E ++ LR G + G + LK D L +D + Sbjct: 746 TESGIMEHPEQAIAKMKMLRAKGIHFSIDDFGTGYSSLSYLKRFPIDTLKIDRSFVIDST 805 Query: 1038 GNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 N D+ +I I A+ LGM T+A V D L G ++ G P + Sbjct: 806 TNKDDQEIIKTIIAMARNLGMDTVAEGVEAKEQQDFLIHHGCHMMQGYYFGRPMPAEKF 864 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 96/262 (36%), Gaps = 11/262 (4%) Query: 290 FRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQ 349 + KH+ + + A+E +G+ + + + + N A + GY EEL G Sbjct: 185 RKRAEKHLRQ----LKQAVETMQLGITITDLDRKIIYMNPAGAEMHGYQVEELLGQDVSM 240 Query: 350 LTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIA 409 PE + K G I E ++G L +V++ G P + Sbjct: 241 FVPPEHRKPLTLERIKEWKGLIR----ESVNIRKDGTTFLVWLMSEIVKNAKGEPFAIVT 296 Query: 410 QIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIK 469 EDI E K+ E+ ++ ER + E+ + ++ + + ++ ++ Sbjct: 297 SCEDITERKQAEEALRKSEERYRIVLESAPDPVVVYDTEGKVAYFNPAFSRVFGWTLDES 356 Query: 470 PNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRH-IRALANRVLNKEG 528 + + + E+ + + ++ +E KDG + + + Sbjct: 357 IGRNI--DFLPVENVPENKLIFEKINCGKTLSGIETYCLTKDGKKVGVNISGAGFFDNHD 414 Query: 529 EVERLLGINMDMTEVKQLNEAL 550 +++ + D+TE K+ E + Sbjct: 415 KLQGSIITLQDITERKKTEEEI 436 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 65/170 (38%), Gaps = 2/170 (1%) Query: 286 VMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGL 345 + + + + +SE +R +E + + + TEG+ N A + G++ +E G Sbjct: 300 DITERKQAEEALRKSEERYRIVLESAPDPVVVYDTEGKVAYFNPAFSRVFGWTLDESIGR 359 Query: 346 TFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPL 405 E++ ++ EK+ G+ + +E ++G V ++ + Sbjct: 360 NI-DFLPVENVPENKLIFEKINCGKTLS-GIETYCLTKDGKKVGVNISGAGFFDNHDKLQ 417 Query: 406 YFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWD 455 I ++DI E K+TE+ + L L + I S+ Sbjct: 418 GSIITLQDITERKKTEEEIKFLAYHDVLTGLLNRKSFYTRLEDELIRSYS 467 >UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=C6D7W4_PAESJ Length = 1095 Score = 868 bits (2244), Expect = 0.0, Method: Composition-based stats. Identities = 175/808 (21%), Positives = 323/808 (39%), Gaps = 27/808 (3%) Query: 301 ETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDL 360 E + ++ ++ +G L N A + GY+++E + F Q PEDL + + Sbjct: 140 EQRYITLLKNMFSAAFIIDLQGNILDVNDAAVKLTGYNKQE--HVHFSQFINPEDLEQAM 197 Query: 361 QQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRT 420 ++ + GE ++ ++NG V + +S + D I DI++ R Sbjct: 198 AYNQRALEGETLSFQ--ISILHKNGHNVDVMTTLSPIYMHD-QITGIIGISNDISDETRN 254 Query: 421 EQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVL 480 +Q+ Q +R E I ++L N + + + + + V Sbjct: 255 KQLFQINKQRYESLFEQNPDAISYFDLNGNFMDCNSALENILGYSREELL-YSNYSHLVA 313 Query: 481 PEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDM 540 +R A +LQ + E K G L + + + + I D+ Sbjct: 314 EYERDRARFYFDQALQ-GTVQSYELVCLHKQGHLVYMKLTKLPITVDNRIVGIYSIAKDI 372 Query: 541 TEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPL 600 T KQ AL + + + ++ V I I + NP M G+ + +G+ + Sbjct: 373 TTKKQAENALIEAESKYRSLVEKSIVGVYII-QKNIILYANPYLIDMLGYKEA-IIGMSI 430 Query: 601 LTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIG 660 +++ D + +NI AI + + G DV + GS Sbjct: 431 WDIVYPD--DYSVVKQNIQILYNETDAIRHPLRVLTAEGKLLDVEMYSNRIM-YQGSPA- 486 Query: 661 SVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFID 720 + I DVTE ++ ++ A HD+LT L NR FE+ L L+T + + A++++D Sbjct: 487 VIGTILDVTERKRAEELNAFLAYHDSLTELPNRRKFEEMLENALETAKTARRHFAVMYLD 546 Query: 721 LDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARF 779 +DRFK +NDS GHA GD LL + + +R +D AR+GGDEF ++LP + SA Sbjct: 547 MDRFKYINDSLGHAVGDQLLIAFSKRLQEQIRETDFAARMGGDEFTVILPHIRDNNSAIE 606 Query: 780 IATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGR 839 +A RII + F E + S GI++ ++ ++ +M AD A + +K+ G+ Sbjct: 607 VARRIIERTRE-PFYIEDYELFITTSIGISIYPNDGDDSSTLMKNADSALFRAKDLGKNG 665 Query: 840 VTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-S 898 ++ + + D + + I+ ++L M + I + +L W Sbjct: 666 YQIFTSSMNVQTYKVFTLEKDLR-KAIQRDELEMYYQPKVN--IHTGEIVGAEALIRWNH 722 Query: 899 CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV--ASKGISISLPLSVAGLSS 956 E ++ F + L +L V +Q + K I IS+ ++ S Sbjct: 723 PEWGLVSPNEFIPISEETGLILSLGNWVKRTVCRQNKEWQLAGLKPIPISINVTAKRFLS 782 Query: 957 ATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLSQVGRDL 1012 ++ + + L + L P L + I ++L++AE ++ L G I L G Sbjct: 783 KDFMDAIQQILAETGLEPHYLEIEITESSLLENAETVMHTLDSLNKLGVTISLDDFGTGY 842 Query: 1013 QIFNSLKANM--ADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLV 1070 + LK + L +D ++ D +I+ I AQ + M +A V Sbjct: 843 SSLSYLKRFKHTINILKIDRSFIHDLHQGSDDNAIISAIIQLAQHMNMSVVAEGVETGEQ 902 Query: 1071 MDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 + L + DL+ G + + + Sbjct: 903 LHILKLLKCDLVQGYLFSRPVQAEAFAQ 930 Score = 209 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 62/373 (16%), Positives = 141/373 (37%), Gaps = 18/373 (4%) Query: 306 NAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEK 365 ++ + L G+ ++ N+A LGYS EE + LT+ L + + +K Sbjct: 28 TMFDFRSDIFLLFDHNGRLIEANQAFTDTLGYSLEEFKHLTYGSLLPGNQRQRAKEHFQK 87 Query: 366 LISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQ 425 L+ GEI + E R ++ G + + + D F A +D++++K E Sbjct: 88 LLHGEIQIF--EIRVLHKTGQFIDLTVTAFPRKLND-AIDGFYAIAKDLSDIKLME---- 140 Query: 426 QLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQ 485 +R + + +L+ NI + +L ++ + + PED + Sbjct: 141 ---QRYITLLKNMFSAAFIIDLQGNILDVNDAAVKLTGYNKQEHVHFSQF---INPEDLE 194 Query: 486 HAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQ 545 A + +L+ + I K+G + ++ ++GI+ D+++ + Sbjct: 195 QAMAYNQRALE-GETLSFQISILHKNGHNVDVMTTLSPIYMHDQITGIIGISNDISDETR 253 Query: 546 LNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLH 605 + K+R + +A+ D+ N E + G+++EE L ++ Sbjct: 254 NKQLFQINKQRYESLFEQNPDAISYFDLNGNFMDCNSALENILGYSREELLYSNYSHLVA 313 Query: 606 ITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVI 665 D + + ++V + G + + P++ +D +G + Sbjct: 314 EYERDRARFY---FDQALQGTVQSYELVCLHKQGHLVYMKLTKLPIT-VDNRIVGIYSIA 369 Query: 666 QDVTESRKMLRQL 678 +D+T ++ L Sbjct: 370 KDITTKKQAENAL 382 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 51/313 (16%), Positives = 117/313 (37%), Gaps = 29/313 (9%) Query: 291 RAERKHI-SESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQ 349 K + ++ + + E + ++ G ++ N AL LGYS+EEL + Sbjct: 251 ETRNKQLFQINKQRYESLFEQNPDAISYFDLNGNFMDCNSALENILGYSREELLYSNYSH 310 Query: 350 LTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIA 409 L + ++ ++ + G + +Y E ++ G +V+ L + D + + Sbjct: 311 LVAEYERDRARFYFDQALQGTVQSY--ELVCLHKQGHLVYMKLTKLPIT-VDNRIVGIYS 367 Query: 410 QIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIK 469 +DI K+ E + + E +G++ + K I + + ++ Sbjct: 368 IAKDITTKKQAENALIEAESKYRSLVEKSIVGVYIIQ-KNIILYANPYLIDMLGY-KEAI 425 Query: 470 PNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGE 529 +W + V P+D ++ I+ + R+ +G + + + +G Sbjct: 426 IGMSIW-DIVYPDDYSVVKQNIQILYNETDAIRHPLRVLTAEGKLLDVEMYSNRIMYQGS 484 Query: 530 VERLLGINMDMTEVKQLNE-----ALFQE------KERLHITLDSIGE---------AVV 569 ++G +D+TE K+ E A + + L++ E AV+ Sbjct: 485 PA-VIGTILDVTERKRAEELNAFLAYHDSLTELPNRRKFEEMLENALETAKTARRHFAVM 543 Query: 570 CIDMAMKITFMNP 582 +DM + ++N Sbjct: 544 YLDMD-RFKYIND 555 Score = 71.6 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 18/140 (12%), Positives = 50/140 (35%), Gaps = 5/140 (3%) Query: 539 DMTEVKQLNEALFQEKERLHIT-LDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALG 597 D + + E + E + T D + + D ++ N G++ EE Sbjct: 7 DFLKRNKRQEDIPILSEWFNTTMFDFRSDIFLLFDHNGRLIEANQAFTDTLGYSLEEFKH 66 Query: 598 VPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGS 657 + ++L + + ++ + ++G D+ + P L+ + Sbjct: 67 LTYGSLLPGNQRQRA---KEHFQKLLHGEIQIFEIRVLHKTGQFIDLTVTAFP-RKLNDA 122 Query: 658 NIGSVLVIQDVTESRKMLRQ 677 G + +D+++ + M ++ Sbjct: 123 IDGFYAIAKDLSDIKLMEQR 142 >UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALY4_PELPD Length = 1238 Score = 868 bits (2244), Expect = 0.0, Method: Composition-based stats. Identities = 149/836 (17%), Positives = 302/836 (36%), Gaps = 34/836 (4%) Query: 276 ILLPANIMTMVMYAFRAERKHI----SESETHFRNAMEYSAIGMALVGTEGQ-WLQTNKA 330 ++ N M + R ++ + S+ R E + + + G N Sbjct: 408 LVSCFNSMLERLNNDRITQQELVAAARASDAQ-RALFESIPLPLTVTSLSGHSLRHANGP 466 Query: 331 LCQFL--GYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVV 388 + + L + + E+ + L+ E N E Sbjct: 467 ALELFMPDQTAAGLESWSPFDVIAGENQ---RETFLSLLVEEKNIDEYELLLRLPGAPCF 523 Query: 389 WALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELK 448 W+ ++V V + + IN K E+ + A ++ + Sbjct: 524 WSQVSVRPVSYQGEQA--LLTLFTPINLRKHLEEGVRNEKAFSQAALDSLPGIFFMLGSD 581 Query: 449 PNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRIT 508 I S ++ + + P+ R+ +++ + + + E + Sbjct: 582 FRILSTNRNFDR-FRETTSPGSPFSSIELHFPPDQREKIRSMVQGGFRRGAA-EAEVSLQ 639 Query: 509 VKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAV 568 R I L +R+ GE + L+ + +D++ ++ L E + E++ Sbjct: 640 GS-SSREIYLLTSRLFLLGGE-DCLITVGIDISARRRAEATL----ELWGRVFECTSESI 693 Query: 569 VCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAI 628 + D A +I +N +G+ EE +G L + + +G ++ R + Sbjct: 694 MITDAAQRIVSVNQAFCATTGYRAEEIIGQSSLALR--SDVHDGIYFRQLWRGIRKRGSW 751 Query: 629 EQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALT 688 + + ++G + + G+ + + D++ + +++ + A HDALT Sbjct: 752 QGEFWCRHKNGEVSPQWMVVNTVHDRQGTVTNYIALFTDISAQKSQEQRIQHIAHHDALT 811 Query: 689 HLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLML 748 +L NR ++L + LQ + + A++FIDLD FK +NDS GH GD +L A+ + Sbjct: 812 NLPNRLLCMERLILALQQAHRNGRHVAVIFIDLDHFKNINDSLGHHVGDCVLVTAANRLS 871 Query: 749 SMLRSSDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAG 807 +R D ++RLGGDEF ++L D + I + + + G S G Sbjct: 872 MGVRDGDTVSRLGGDEFVIILADIEDSHQIEEIMKHRLLPLMRQPYDAGGYELHCSCSIG 931 Query: 808 ITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIK 867 I++ ++ ++ AD A Y +K GR Y + + +R ++ + + I+ Sbjct: 932 ISIFPEDGLDKDTLLRNADTAMYRAKEVGRNNYHFYTEELNSRAMQRLSIETSLR-KGIE 990 Query: 868 ENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRV 926 N+L++ + L +L W + +I F + L + ++V Sbjct: 991 RNELLLHYQPKLDLH--TGKPYGLEALLRWQHPDHGMISPMEFIPIAEETGLIIPIGKQV 1048 Query: 927 FHEFFQQAAKAV--ASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAE 984 +Q ++ I +SL +S V DL++ + + P + L + Sbjct: 1049 IRNACRQLSRWSSVGMSHICLSLNVSAVQFRDRRFVEDLVQLVREEGVSPHRIELELTET 1108 Query: 985 AILDH----AESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNL 1040 +++ ++ L+ G + G N L D L +D + Sbjct: 1109 MLMEDAVRTIRVMETLKDEGFLFSIDDFGTGYSSLNYLHRFPIDCLKIDRSFIRGMLERP 1168 Query: 1041 MDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 D +I I G L M+ IA V L G D I G +A + + Sbjct: 1169 ADLAIIKAIIGLGHTLDMQVIAEGVEKEDEYRALRAAGCDGIQGYFVARPLTPEQV 1224 >UniRef50_C6BWZ0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BWZ0_DESAD Length = 716 Score = 868 bits (2243), Expect = 0.0, Method: Composition-based stats. Identities = 129/692 (18%), Positives = 266/692 (38%), Gaps = 31/692 (4%) Query: 431 ITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKV 490 E + + + + + +PP ++ + + PED++ + Sbjct: 22 FKDFIENTDDLFTQVDTDGRFLYVNPSAQKYFGLPPEKCVGLSIF-DFIHPEDKETTAQD 80 Query: 491 IRDSLQSRSP-FKLEFRITV-KDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNE 548 + S F R ++ V + E ++ I D+T K+ E Sbjct: 81 FNKWQKDPSTNFSYINRQMHLNGSFYYMLWTITAVKDSEQKILWFNCIGRDITSHKETEE 140 Query: 549 ALF--------------QEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEE 594 L ++ + E V D I ++N ++G+++EE Sbjct: 141 ELRKAKDQLKITVDQQTEQLKLATAVFKHSSEGVTITDSNNNIRYINDAFTHITGYSEEE 200 Query: 595 ALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTL 654 +G + + + ++ + + E ++ ++G + SI ++ + Sbjct: 201 VIGQNPSILK--SNRHKPSFYKGVWKSIKTNGMWEGEIWNRRKNGEVFPEWISIKAITDV 258 Query: 655 DGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRH 714 G + + V +D++E++ R++ + A HDALT L NR ++R + + N Sbjct: 259 KGEVVNYIAVFRDISEAKASQRKIQHQAYHDALTGLPNRTLLIDRIRKAIASSNDRKSCI 318 Query: 715 ALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-N 773 AL+FIDLD FK +NDS G+ GD++L++ A+ + + D ++R+GGDEF ++L D + Sbjct: 319 ALLFIDLDNFKNINDSLGYVIGDSVLQQAAARIREFIDEKDTVSRIGGDEFVIMLKDLQD 378 Query: 774 VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASK 833 A +A II+ E + S GI L ++ ++ AD A +K Sbjct: 379 KHDAAVMADTIINLFAQA-LTVESHQFTITPSIGIALYPEDGKTPYSLVRNADTAMNKAK 437 Query: 834 NGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLIS 893 GR R ++ P + R +M + + + + + + + Sbjct: 438 QEGRNRYHLFTPGLTESALRRISMENQLRQTASDNG-FTVYYQPKVNLH--DNTIVGMEA 494 Query: 894 LKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVA--SKGISISLPLS 950 L W +G II F + L + +V + + +S+ LS Sbjct: 495 LIRWIQPDGTIISPAEFIPLAEETGLIVPIGEQVLEAACLDTVELNQRFGTNLKVSVNLS 554 Query: 951 VAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLS 1006 + L+ ++++ + + + P L L I ++D E ++K+ G + + Sbjct: 555 LRQFKQEQLMKNIMDIIAMTAICPSCLELEITESTVMDDIEQTKTILEKMDKLGITLSID 614 Query: 1007 QVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVV 1066 G + LK L +D A + N D+ L+ I A+ + T+A + Sbjct: 615 DFGTGYSSLSHLKNMPMHTLKIDQSFVAGLPHNKSDQKLVKAIMSLARSFDLSTVAEGIE 674 Query: 1067 LPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 P + + +G +++ G + PL+ Sbjct: 675 TPEQYNYMRELGCEVMQGYYYSPPVPLEEFAA 706 Score = 152 bits (384), Expect = 1e-34, Method: Composition-based stats. Identities = 51/329 (15%), Positives = 113/329 (34%), Gaps = 45/329 (13%) Query: 304 FRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQV 363 F++ +E + V T+G++L N + ++ G E+ GL+ PED Q Sbjct: 22 FKDFIENTDDLFTQVDTDGRFLYVNPSAQKYFGLPPEKCVGLSIFDFIHPEDKETTAQDF 81 Query: 364 EKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQV 423 K +S R + NG + L ++ V+ ++ L+F DI K TE+ Sbjct: 82 NKWQKDPSTNFSYINRQMHLNGSFYYMLWTITAVKDSEQKILWFNCIGRDITSHKETEEE 141 Query: 424 NQQLMERITLANE--------------AGGIGIWEWELKPNIFSWDKRMFELYEIPPHIK 469 ++ +++ + + G+ + NI + + Sbjct: 142 LRKAKDQLKITVDQQTEQLKLATAVFKHSSEGVTITDSNNNIRYINDAFTHITGYSEEEV 201 Query: 470 PNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALAN-RVLNKEG 528 + K + S+++ ++ E K+G ++ + + +G Sbjct: 202 IGQNPSILKSNRH-KPSFYKGVWKSIKTNGMWEGEIWNRRKNGEVFPEWISIKAITDVKG 260 Query: 529 EVERLLGINMDMTEVKQLNEALFQEK---------------ERLHITLDSIGE-----AV 568 EV + + D++E K + + +R+ + S + A+ Sbjct: 261 EVVNYIAVFRDISEAKASQRKIQHQAYHDALTGLPNRTLLIDRIRKAIASSNDRKSCIAL 320 Query: 569 VCIDMAMKITFMNPVAEKMSGWTQEEALG 597 + ID+ +N G+ +G Sbjct: 321 LFIDLDN-FKNINDS----LGY----VIG 340 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 89/256 (34%), Gaps = 23/256 (8%) Query: 277 LLPANIMTMVMYAFRAERKHISESETHFR--------------NAMEYSAIGMALVGTEG 322 +L N + + + + + + +++ + ++S+ G+ + + Sbjct: 122 ILWFNCIGRDITSHKETEEELRKAKDQLKITVDQQTEQLKLATAVFKHSSEGVTITDSNN 181 Query: 323 QWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYN 382 N A GYS+EE+ G L + V K I + E Sbjct: 182 NIRYINDAFTHITGYSEEEVIGQNPSILKSNRHKPSFYKGVWKSIKTN-GMWEGEIWNRR 240 Query: 383 RNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGI 442 +NG+V +++ + G + +IA DI+E K +++ Q L + Sbjct: 241 KNGEVFPEWISIKAITDVKGEVVNYIAVFRDISEAKASQRKIQHQAYHDALTGLPNRTLL 300 Query: 443 WEWELKPNIFSWDKR--MFELYEIPPHIKPNWQVWYECVLPED-RQHAEKVIRDSLQSRS 499 + ++ I S + R L I N V+ + Q A IR+ + + Sbjct: 301 ID-RIRKAIASSNDRKSCIALLFIDLDNFKNINDSLGYVIGDSVLQQAAARIREFIDEKD 359 Query: 500 PFK----LEFRITVKD 511 EF I +KD Sbjct: 360 TVSRIGGDEFVIMLKD 375 >UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Oxalobacter formigenes RepID=C3X2S2_OXAFO Length = 1049 Score = 867 bits (2241), Expect = 0.0, Method: Composition-based stats. Identities = 130/640 (20%), Positives = 244/640 (38%), Gaps = 24/640 (3%) Query: 471 NWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNK--EG 528 N +W + L E + + + RS + + + + VLN E Sbjct: 411 NKPIWMQDFLHEPAMKHWQKHIEHFKWRS--SAILPLHRNGNVIGVMFFYSNVLNAFTES 468 Query: 529 EVERLLGINMDMT---EVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAE 585 LL + D+ E + E L + E ++ +D I +N Sbjct: 469 SQRLLLELVEDIDFALEHFEKEEQL----QLSAQIFAQSSEGIMLLDPNCHIVMVNSAFT 524 Query: 586 KMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVH 645 ++G+++EE LG + + + ++ A + + +V + G Y Sbjct: 525 HITGYSEEETLGRNPKML--ASGQHDRNFYATMWEAIETEGRWQGEVWNRRKDGSLYPEW 582 Query: 646 YSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQ 705 I + G+ + D+TE ++ ++ + A D LT L NR + + + Sbjct: 583 LLIQTMRDSRGTLTHYIGTFTDLTERKETEERVQWLAHFDPLTGLPNRTLLHIRSNLAIS 642 Query: 706 TVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEF 765 H+ AL+F+DLD FK VNDS GH GD LL++ + +++ +R D ++RLGGDEF Sbjct: 643 LAQRRHEPLALMFLDLDNFKNVNDSLGHGVGDELLKQFSQRLVNAVREQDTISRLGGDEF 702 Query: 766 GLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQA 825 L+LP + + A ++A R+++ + + E + S GI + + + A Sbjct: 703 VLVLPGTDTDGAAYLAERLLN-IAARQYNIERHEINLTVSIGIAMYPTDGTDFDTLWRSA 761 Query: 826 DIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPE 885 D A Y +K GR + + A + + + R ++ NQ ++ + Sbjct: 762 DAAMYRAKQSGRNDYCFFTTEMQARSARTLQIDNALR-RALERNQFSLVYQPQ--LSLNT 818 Query: 886 ARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV--ASKG 942 R + +L W + F + V +Q K Sbjct: 819 NRIVGFEALIRWTHPQFGNTPPDEFIPIAESNGQIIPIGEWVLKTAVRQLRLWQDNGLKD 878 Query: 943 ISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRL 998 ++IS+ LS L ++ LE + + P L L + +++ + +LR Sbjct: 879 VTISVNLSAVQFRHPRLPELVMAILEEAGVSPECLQLELTEGVAMENPLAAITVIDELRK 938 Query: 999 AGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGM 1058 G RI + G LK L +D ++ + D +++ + A LGM Sbjct: 939 KGIRISIDDFGTGYSSLTYLKRFNVYSLKIDRSFVQDLPNDTEDMAIVSAVISLADSLGM 998 Query: 1059 KTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 T+A V ++ L G I G ++ D + + Sbjct: 999 ITVAEGVETKEQLEFLRSRGCTEIQGYYLSRPLQADAVFS 1038 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 69/220 (31%), Gaps = 4/220 (1%) Query: 298 SESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLN 357 E S+ G+ L+ + N A GYS+EE G + L + Sbjct: 490 EEQLQLSAQIFAQSSEGIMLLDPNCHIVMVNSAFTHITGYSEEETLGRNPKMLASGQHDR 549 Query: 358 KDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINEL 417 + + I E + E ++G + L + +R + GT ++I D+ E Sbjct: 550 NFYATMWEAIETE-GRWQGEVWNRRKDGSLYPEWLLIQTMRDSRGTLTHYIGTFTDLTER 608 Query: 418 KRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYE 477 K TE+ Q L L + S +R E + N++ + Sbjct: 609 KETEERVQWLAHFDPLTGLPNRTLLHI--RSNLAISLAQRRHEPLALMFLDLDNFKNVND 666 Query: 478 CVLPEDRQHAEKVIRDSLQSR-SPFKLEFRITVKDGIRHI 516 + K L + R+ + + + Sbjct: 667 SLGHGVGDELLKQFSQRLVNAVREQDTISRLGGDEFVLVL 706 Score = 87.1 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 41/228 (17%), Positives = 82/228 (35%), Gaps = 19/228 (8%) Query: 314 GMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINT 373 G+ V + +W+ N LC+ GY+ EE + +L + + +E L G+I+ Sbjct: 2 GILSVSLD-KWIHFNDKLCEIFGYTPEEFGKKGWNELCDTPCAEE-NRGIESLKRGDIDE 59 Query: 374 YSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITL 433 + EK + +NG A + V DG P Y + +EDI E K+ + +L + Sbjct: 60 FREEKAFRRKNGRNAIAEVHFRCVAKDDGAPDYLVVTVEDITERKKAQTEIYRLSQLYAT 119 Query: 434 ANEAGGIGIWEW-------ELKPNIFSWDKRMFEL--YEIPPHIKPNWQVWYECVLPEDR 484 + + ++ I + R F + + + +PE+ Sbjct: 120 LSHCNQAIVHSKTEKELFQQICYGIVHYSGRRFTMAWVGLIDENAEKVDMTVSYGIPEEL 179 Query: 485 QHAEKVI-----RDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKE 527 + + D+++ SP + R I+ + Sbjct: 180 AEPFRTMSIVSRFDNIRENSPAGIAIREKR---TVWIQDVWKDPFLAN 224 Score = 81.3 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 29/174 (16%), Positives = 60/174 (34%), Gaps = 11/174 (6%) Query: 382 NRNGDVVWALLAVSLVRHT--DGTPLYFIAQIEDIN---ELKRTEQVNQQLMERITLANE 436 +RNG+V+ + S V + + + + +EDI+ E E+ Q + Sbjct: 446 HRNGNVIGVMFFYSNVLNAFTESSQRLLLELVEDIDFALEHFEKEEQLQLSAQ----IFA 501 Query: 437 AGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQ 496 GI + +I + + DR + ++++ Sbjct: 502 QSSEGIMLLDPNCHIVMVNSAFTHITGYSEEETLGRNPKMLASGQHDRN-FYATMWEAIE 560 Query: 497 SRSPFKLEFRITVKDGIRHIRAL-ANRVLNKEGEVERLLGINMDMTEVKQLNEA 549 + ++ E KDG + L + + G + +G D+TE K+ E Sbjct: 561 TEGRWQGEVWNRRKDGSLYPEWLLIQTMRDSRGTLTHYIGTFTDLTERKETEER 614 Score = 67.8 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 43/115 (37%), Gaps = 3/115 (2%) Query: 567 AVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRS 626 ++ + + K N ++ G+T EE + + +E++ D Sbjct: 2 GILSVSLD-KWIHFNDKLCEIFGYTPEEFGKKGWNELCDTPCAEENRGIESLKRGDIDE- 59 Query: 627 AIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYS 681 ++ ++G + ++ DG+ V+ ++D+TE +K ++ Sbjct: 60 -FREEKAFRRKNGRNAIAEVHFRCVAKDDGAPDYLVVTVEDITERKKAQTEIYRL 113 Score = 53.9 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 51/133 (38%), Gaps = 8/133 (6%) Query: 440 IGIWEWELKPNIFSWDKRMFELYEIPPHI--KPNWQVWYECVLPEDRQHAEKVIRDSLQS 497 +GI L ++ ++ E++ P K W + E+ + E + R + Sbjct: 1 MGILSVSLDK-WIHFNDKLCEIFGYTPEEFGKKGWNELCDTPCAEENRGIESLKRGDIDE 59 Query: 498 RSPFKLEFRITVKDGIRHI-RALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKER 556 F+ E K+G I V +G + L+ D+TE K+ +++ + Sbjct: 60 ---FREEKAFRRKNGRNAIAEVHFRCVAKDDGAPDYLVVTVEDITERKKAQTEIYRLSQL 116 Query: 557 LHITLDSIGEAVV 569 TL +A+V Sbjct: 117 YA-TLSHCNQAIV 128 >UniRef50_C4XRM5 Putative signaling protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XRM5_DESMR Length = 821 Score = 867 bits (2240), Expect = 0.0, Method: Composition-based stats. Identities = 176/805 (21%), Positives = 318/805 (39%), Gaps = 27/805 (3%) Query: 301 ETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDL 360 E +R E S + G L N + G E+ G +Q+ P D + Sbjct: 10 EDVYRRIFESSPNAALVRDASGVVLAVNASFEALFGLDAAEVVGRDLRQVVRPADDGETA 69 Query: 361 QQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRT 420 L +S R+ +G V A DG P+ + DI+ +R Sbjct: 70 GGDWSL---GGAAFSRRTRWTAGDGVTVDACPCQFPAGQVDGKPVSCV-IFRDISGRRRA 125 Query: 421 EQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKP--NWQVWYEC 478 E+ + E GI++ ++ + +Y + +++ Sbjct: 126 EEQLDAAERKYRAIFENAVEGIFQTTPGGRYLEVNRTLARIYGFDSVDEMTEHFRDIKNQ 185 Query: 479 VLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLNKEGEVERLLGIN 537 + E ++ + +R+ E I KDG + I A V + +G V G Sbjct: 186 LYVEPKRR-DDFVRELSAHDQVRNFESAIHKKDGSVIWISENARVVRDADGAVAYYEGTV 244 Query: 538 MDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALG 597 +D+T+ K+ E L ++ + +A+ IDM I +N E + G+ E G Sbjct: 245 VDITDRKRAEEQLAAQRAYFDQLFANSPQAIALIDMRRNIVDVNHAFEDLFGFKAAEIKG 304 Query: 598 VPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGS 657 + +I E+ A S + ++ R G V P+ G Sbjct: 305 YGMR--AYIVPKHLLGECESTRGAILSGKPMVRETFRQHRDGRLIPVSMIGFPIEF-GGQ 361 Query: 658 NIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTH-QRHAL 716 G V + QD++E + Q+++ A HDALT L NR+ F +L L ++A+ Sbjct: 362 PQGIVYIYQDISERKAFEEQITHQAFHDALTGLPNRSLFADRLDRALTRARRRGDYQYAV 421 Query: 717 VFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVE 775 + IDL++FK +ND+ GH AGD LL E++ +++ +RS D +ARLGGDEF ++L + + + Sbjct: 422 LMIDLNKFKGINDTLGHQAGDQLLVEVSRRLMACVRSMDTVARLGGDEFAVILEELKSKK 481 Query: 776 SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNG 835 + RI +A+ + G GAS GI L + +++ ADIA Y +K Sbjct: 482 EVMAVVDRIGAALGK-PCMLCGTTVTPGASVGIVLRTRDYQSPEDILRDADIAMYRAKES 540 Query: 836 GRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLK 895 GR + +++ + + + D + + +L++ + + R +L Sbjct: 541 GRPSM-IFDRRMHQEILDAINLEADLR-AALDRGELLLHYQPIVDVQ--TGRIEGFEALV 596 Query: 896 LW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV----ASKGISISLPLS 950 W + ++ F + L L R V E +Q ++ +S+S+ +S Sbjct: 597 RWDHPDRGLVPPVQFIPLAEETGLIQPLGRFVIAEACRQLRAWQLELPEAEQLSVSVNVS 656 Query: 951 VAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLS 1006 LV+ + LE + L P L L I ++ A+ + +L+ G +I + Sbjct: 657 CHQFVKEGLVDHVAGVLETTGLDPACLKLEITESVLMHDAQHTAGELSRLKALGVKIAID 716 Query: 1007 QVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVV 1066 G + L+ D+L +D + N + ++ I A+ LG+ IA V Sbjct: 717 DFGTGYSSLSYLRQLPIDHLKIDRSFISGDDVNGESQEIVKSIIALARSLGLTVIAEGVE 776 Query: 1067 LPLVMDTLSGIGVDLIYGEVIADAQ 1091 +D L D G + + Sbjct: 777 HQDQLDKLRNADCDKAQGFMFSRPV 801 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 46/278 (16%), Positives = 104/278 (37%), Gaps = 12/278 (4%) Query: 282 IMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGY-SQE 340 ++ + R + + +E +R E + G+ G++L+ N+ L + G+ S + Sbjct: 114 VIFRDISGRRRAEEQLDAAERKYRAIFENAVEGIFQTTPGGRYLEVNRTLARIYGFDSVD 173 Query: 341 ELRGLTFQQL-----TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVS 395 E+ F+ + P+ + +++ +S + E + ++G V+W Sbjct: 174 EMT-EHFRDIKNQLYVEPKRRDDFVRE----LSAHDQVRNFESAIHKKDGSVIWISENAR 228 Query: 396 LVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWD 455 +VR DG Y+ + DI + KR E+ I +++ NI + Sbjct: 229 VVRDADGAVAYYEGTVVDITDRKRAEEQLAAQRAYFDQLFANSPQAIALIDMRRNIVDVN 288 Query: 456 KRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRH 515 +L+ + + V + R ++ S P E +DG Sbjct: 289 HAFEDLFGFKAAEIKGYGMRAYIVPKHLLGEC-ESTRGAILSGKPMVRETFRQHRDGRLI 347 Query: 516 IRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQE 553 ++ + G+ + ++ I D++E K E + + Sbjct: 348 PVSMIGFPIEFGGQPQGIVYIYQDISERKAFEEQITHQ 385 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 31/235 (13%), Positives = 70/235 (29%), Gaps = 4/235 (1%) Query: 286 VMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGL 345 + + + ++ +F S +AL+ + N A G+ E++G Sbjct: 246 DITDRKRAEEQLAAQRAYFDQLFANSPQAIALIDMRRNIVDVNHAFEDLFGFKAAEIKGY 305 Query: 346 TFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPL 405 + P+ L + + I R +R+G ++ + + G P Sbjct: 306 GMRAYIVPKHLLGECESTRGAILSGKPMVRETFR-QHRDGRLIPVSMIGFPIEFG-GQPQ 363 Query: 406 YFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIP 465 + +DI+E K E+ L + L + +R Y + Sbjct: 364 GIVYIYQDISERKAFEEQITHQAFHDALTGLPNRSLFAD-RLDRALTRARRRGDYQYAVL 422 Query: 466 PHIKPNWQVWYECV-LPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRAL 519 ++ + + Q +V R + R+ + + L Sbjct: 423 MIDLNKFKGINDTLGHQAGDQLLVEVSRRLMACVRSMDTVARLGGDEFAVILEEL 477 >UniRef50_Q2BB47 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BB47_9BACI Length = 1106 Score = 867 bits (2240), Expect = 0.0, Method: Composition-based stats. Identities = 184/827 (22%), Positives = 354/827 (42%), Gaps = 22/827 (2%) Query: 277 LLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLG 336 + ++ + A ++ +S SE +R+ + + + G N +L + Sbjct: 128 TIGIIGISKDITAEENLKQKLSISEQMYRSLFDNHPDAVYSLDLNGDVTAFNDSLVRLFH 187 Query: 337 YSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSL 396 Y + + G++F+Q PE ++ + + G+ Y+M NR+G+ A + Sbjct: 188 YDPD-MHGISFRQFVAPESMSLVMCMFKLAAKGKPQNYNM--TGINRSGEKFDANITNIP 244 Query: 397 VRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDK 456 + TD +DI EL E+ Q+ ER+ LA + G W++ K + W + Sbjct: 245 II-TDNQITGVFGIAKDITELAEKERKLQKAEERLNLAQKTANFGYWDYYFKEDSAYWSE 303 Query: 457 RMFELYEIPPHI-KPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IR 514 M+E++ + P++ + + + PED K SL+ ++P LE+RI KDG +R Sbjct: 304 HMYEMFGVSKDEFIPSFDYYKDFIHPEDLAPFLKNYHASLEEKTPADLEYRIIRKDGQVR 363 Query: 515 HIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMA 574 + + +L+ +G ER +GI+ D+TE +++ + L + E+ ++ V +D A Sbjct: 364 RLHHQSTLILDGDGCPERAVGISRDVTEQREIEDRLAENTEQFKSFYNNSDVGVWSLDPA 423 Query: 575 MK-ITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVV 633 K + + + G+T++E D+ + N + + + I Q Sbjct: 424 GKKVLICSNAILAIYGYTKKELY-RDPRIWNRSIHPDDVQEVINNQNKISEGNIIRQQYR 482 Query: 634 LHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANR 693 + R G V + P+ G I ++ D+T ++ Q+ + A HD +T L NR Sbjct: 483 IITRDGKLKWVSDHLIPIYDEKGRLIRLDGIVADITAQKQAEAQMEFLAYHDYMTGLPNR 542 Query: 694 ASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRS 753 F++ L L + ++ A++++DLDRFK +ND+ GH GD +L+E A + + +R Sbjct: 543 RLFDQTLNGLFEG--KNPEKFAIMYLDLDRFKHINDTLGHPIGDQVLKEAADRITASIRK 600 Query: 754 SDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLID 812 D +R+GGDEF ++ + ++E A +A +I + + EG + AS GI+L Sbjct: 601 GDFASRMGGDEFAIIARNVESIEDASRLAAKITGTI-QKPYEIEGYELFITASIGISLYP 659 Query: 813 DNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLM 872 +N E+ AD A Y +K G+ VY ++ + D + +K++Q Sbjct: 660 NNGSTPEELARNADAALYHAKQMGKSSHQVYNASMNIESFKKYCLERDMR-NALKDDQFY 718 Query: 873 MLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFF 931 + PR + +L W + I+ F + L + V Sbjct: 719 VEFQPKIEPR--THKLAGAEALLRWNHPDWGIVSPMEFIPVAEESGLIVEIGDWVIENVI 776 Query: 932 QQAAKAV--ASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH 989 + + + IS+ +S L + + + + P+LL L + +++ + Sbjct: 777 AKMEEWQKGGLSLVPISINVSGQRFYKNNLAEMIGDLCQKHGISPKLLELELTESSLIHY 836 Query: 990 AES-VQKLRLAG---CRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEML 1045 ++ +Q+L G ++ L G L+ + L +D N+ NL D + Sbjct: 837 SDQVLQELEKLGQLKIKLSLDDFGTGFSSLTHLRKFRFNTLKIDKSFTKNIISNLEDATI 896 Query: 1046 ITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQP 1092 + + A L MK +A V +D L G D I G + + Sbjct: 897 TSSLIDMAHGLNMKVVAEGVEEFEQLDFLKKKGCDEIQGFLFSRPVS 943 Score = 184 bits (468), Expect = 2e-44, Method: Composition-based stats. Identities = 63/379 (16%), Positives = 147/379 (38%), Gaps = 14/379 (3%) Query: 304 FRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQV 363 + + ++ ++ EGQ L+ N+A + G+S EE++ F EDL K Sbjct: 31 YESLFLNTSDLAYILDKEGQILKVNEAAVKATGFSAEEIQKRGFFPFVCKEDLPKAETSF 90 Query: 364 EKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQV 423 + ++ G T+ R R+G ++ + + + I +DI + +Q Sbjct: 91 QAVLQGSTQTHIF--RINRRDGGLILLNSVAIPIIQEN-QTIGIIGISKDITAEENLKQK 147 Query: 424 NQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPED 483 + + ++ +L ++ +++ + L+ P + + + V PE Sbjct: 148 LSISEQMYRSLFDNHPDAVYSLDLNGDVTAFNDSLVRLFHYDPD--MHGISFRQFVAPES 205 Query: 484 RQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEV 543 + P + G + + N + + ++ + GI D+TE+ Sbjct: 206 MSLVMCMF-KLAAKGKPQNYNMTGINRSGEKFDANITNIPIITDNQITGVFGIAKDITEL 264 Query: 544 KQLNEALFQEKERLHITLDSIGEAVVCI----DMAMKITFMNPVAEKMSGWTQEEALGVP 599 + L + +ERL++ + D A + + +M G +++E + Sbjct: 265 AEKERKLQKAEERLNLAQKTANFGYWDYYFKEDSA----YWSEHMYEMFGVSKDEFIPSF 320 Query: 600 LLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNI 659 I D P ++N +++ ++ + + + + G +H+ T + DG Sbjct: 321 DYYKDFIHPEDLAPFLKNYHASLEEKTPADLEYRIIRKDGQVRRLHHQSTLILDGDGCPE 380 Query: 660 GSVLVIQDVTESRKMLRQL 678 +V + +DVTE R++ +L Sbjct: 381 RAVGISRDVTEQREIEDRL 399 Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 41/265 (15%), Positives = 96/265 (36%), Gaps = 7/265 (2%) Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQV 474 ++ + + + + + I ++ + + Sbjct: 15 TTIQEPGAPLVENIHIYESLFLNTSDLAYILDKEGQILKVNEAAVKATGFSAEE-IQKRG 73 Query: 475 WYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLL 534 ++ V ED AE + LQ S FRI +DG + + +E + ++ Sbjct: 74 FFPFVCKEDLPKAETSFQAVLQ-GSTQTHIFRINRRDGGLILLNSVAIPIIQENQTIGII 132 Query: 535 GINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEE 594 GI+ D+T + L + L ++ D+ +AV +D+ +T N ++ + + Sbjct: 133 GISKDITAEENLKQKLSISEQMYRSLFDNHPDAVYSLDLNGDVTAFNDSLVRLFHYDPD- 191 Query: 595 ALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTL 654 G+ + ++ L+ ++ ++ RSG +D + + P+ T Sbjct: 192 MHGISFRQFVAP---ESMSLVMCMFKLAAKGKPQNYNMTGINRSGEKFDANITNIPIITD 248 Query: 655 DGSNIGSVLVIQDVTESRKMLRQLS 679 + G + +D+TE + R+L Sbjct: 249 N-QITGVFGIAKDITELAEKERKLQ 272 >UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Magnetospirillum RepID=Q2W807_MAGSA Length = 880 Score = 867 bits (2240), Expect = 0.0, Method: Composition-based stats. Identities = 151/730 (20%), Positives = 283/730 (38%), Gaps = 38/730 (5%) Query: 385 GDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWE 444 G V L + VR P + D + Q + ++ A I + E Sbjct: 160 GHGVEHFLVLRPVRSAISRP--MVTIPNDAS--------LAQAVTQLRNARADAAIVLGE 209 Query: 445 WELKPNIFSWDKRMFELYE---IPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPF 501 +L P I + + + IP + + ED A + + + R Sbjct: 210 GDLPPGIITERDVLRLIAGTGPIPATVGEVASRPLLTITEEDSLLAARAMLEQKHIRH-- 267 Query: 502 KLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITL 561 IT DG + L+ + + E + ++ + E ++ + Sbjct: 268 ---IGITRMDGEL-VGLLSFSDILATLQYEYVHRLDEALKERDAALLRSRKDLNLARKVI 323 Query: 562 DSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSA 621 ++ + ++ +D KI F+NP M+G+T EE +G + + + +++Y+ Sbjct: 324 EASLDGIMIVDSTQKIEFVNPAFTHMTGYTAEEIIGKNPNVLK--SGHHDETFYKHMYTV 381 Query: 622 DTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYS 681 ++ + ++ ++G Y +I + G + D+TE +K ++ Sbjct: 382 LEAQDYWQGEIWNRRKNGEIYPEWLTINVIRDDTGDITQYAAIFSDITERKKTEERIKNL 441 Query: 682 ASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLR 741 A D LT L NR F +L+I + + Q+ A++F+DLD FK +NDS GH GD +L Sbjct: 442 AYFDVLTALPNRRLFTDRLQIAIANAHRHGQQLAIMFLDLDLFKRINDSLGHGVGDQVLV 501 Query: 742 ELASLMLSMLRSSDVLARLGGDEFGLLLPDCNV-ESARFIATRIISAVNDYHFIWEGRVH 800 E A+ + +R D +ARLGGDEF +LLP+ + E +A R+I+ V F+ + Sbjct: 502 ETAARISHCVREGDTVARLGGDEFTVLLPELDHLEDVAKLAERVIAHVKQ-PFLVDDNEL 560 Query: 801 RVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLD 860 V S GI + ++ ++ AD A Y +K+ GR +Y A ER M Sbjct: 561 YVTTSIGIAVYPEDGTTVEALIKNADTAMYRAKDLGRNSYQLYTAAMNARSFERLTMESS 620 Query: 861 EQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALS 919 + + + ++ + R + +L W E ++ F + Sbjct: 621 LR-HALTREEFRLVYQVKVD--SEDGRMSGVEALVRWHHPEMGLVSPVDFIPLAEAMGVI 677 Query: 920 HALDRRVFHEFFQQAAKA--VASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLL 977 + V +Q + + I++ +S + + L + LPP+ L Sbjct: 678 SDIGEWVLRTACRQCKHWMDLGLPPVRIAVNVSAQQFVETDVPEVVARALRETGLPPQYL 737 Query: 978 HLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELC 1033 L + ++ + ++ LR G RI + G + LK D L +D Sbjct: 738 ELELTETVLMQRVDEVVAVLKSLRAMGVRISIDDFGTGYSSLSYLKRMPIDALKVDRSFV 797 Query: 1034 ANVQGNL-----MDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIA 1088 ++ +++ I A L +K IA V P + L G D + G +I+ Sbjct: 798 NDIFDGQSKVTEDGAEIVSTIINLAHNLKLKAIAEGVETPEQAEFLRSKGCDEVQGYLIS 857 Query: 1089 DAQPLDLLVN 1098 + L++ Sbjct: 858 RPVSGEDLIS 867 Score = 145 bits (368), Expect = 7e-33, Method: Composition-based stats. Identities = 37/274 (13%), Positives = 83/274 (30%), Gaps = 6/274 (2%) Query: 265 MSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHF---RNAMEYSAIGMALVGTE 321 + + +L L + + A + + S R +E S G+ +V + Sbjct: 277 LVGLLSFSDILATLQYEYVHRLDEALKERDAALLRSRKDLNLARKVIEASLDGIMIVDST 336 Query: 322 GQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYY 381 + N A GY+ EE+ G L + + ++ + + + E Sbjct: 337 QKIEFVNPAFTHMTGYTAEEIIGKNPNVLKSGHHDETFYKHMYTVLEAQ-DYWQGEIWNR 395 Query: 382 NRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIG 441 +NG++ L ++++R G + A DI E K+TE+ + L L Sbjct: 396 RKNGEIYPEWLTINVIRDDTGDITQYAAIFSDITERKKTEERIKNLAYFDVLTALPNRRL 455 Query: 442 IWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPF 501 + + R + I ++ + + + Sbjct: 456 F--TDRLQIAIANAHRHGQQLAIMFLDLDLFKRINDSLGHGVGDQVLVETAARISHCVRE 513 Query: 502 KLEFRITVKDGIRHIRALANRVLNKEGEVERLLG 535 D + + + + ER++ Sbjct: 514 GDTVARLGGDEFTVLLPELDHLEDVAKLAERVIA 547 >UniRef50_Q7NTV0 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NTV0_CHRVO Length = 1390 Score = 866 bits (2239), Expect = 0.0, Method: Composition-based stats. Identities = 180/814 (22%), Positives = 315/814 (38%), Gaps = 28/814 (3%) Query: 296 HISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPED 355 ++ R + + + + +G ++ N A C+ G+S ++LR + L PE Sbjct: 575 ERKRADEDLRLVLNEAGDAIWVTDVDGYFIFANPAACRLTGHSLDDLREMHIHDLVAPEC 634 Query: 356 LNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDIN 415 L + + K+ E + + V L ++ +IA D+ Sbjct: 635 LGLLAEHLAKI--NNGAFLRSEWKLRLKKSGTVSVDLTSGKMKDG-----RYIAFGRDLT 687 Query: 416 ELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI-PPHIKPNWQV 474 E R EQ + ++ G W+W L+ N F R + P + Sbjct: 688 EQHRAEQELRDRERQLARVIAGSDQGFWDWNLETNRFQVSPRWESMLGYGPGEMHITADS 747 Query: 475 WYECVLPEDRQHAEKVIRDSLQSR-SPFKLEFRITVKDGIRHIRALANRV--LNKEGEVE 531 WYE V PED + I+ +L ++E R + G RV N GE Sbjct: 748 WYEHVHPEDVERTRDSIQRNLSGEMKSHEVEIRCRTRGGDWRWILSRGRVVERNDRGEPL 807 Query: 532 RLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWT 591 + G + D+TE K + ++ DS E ++ ++ IT +N +++G++ Sbjct: 808 SMSGTHTDITERKVFEQ----TQKEAAAVFDSSYEGILMVNPDGVITKVNNAFSRITGYS 863 Query: 592 QEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPL 651 EEA+G + + E ++++ ++ +SG Y SI+ + Sbjct: 864 AEEAIGQKPSLL--ASGKQPISFYEELWNSVKGHDFWRGELWNRRKSGELYAELLSISVV 921 Query: 652 STLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTH 711 G + + D+T+ ++ +L A +D LT + NR +LR + N + Sbjct: 922 RDEQGQVQHYIGIFSDITQLKQHEAELDRVAHYDPLTGVPNRRLLSDRLRQAIVRANRSG 981 Query: 712 QRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD 771 + A+ F+DLD FKAVND GHA GD LL +++ + S+LR D LARLGGDEF +LL + Sbjct: 982 RSCAVCFLDLDGFKAVNDKYGHAVGDQLLVTVSNNLKSILRGDDTLARLGGDEFVVLLSE 1041 Query: 772 C-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACY 830 + E + R+++ V AS G++L +N ++ AD A Y Sbjct: 1042 VGSPEECMLVLDRVLAT-ASRPMPVGDAEVGVTASIGVSLYPQDNVDPDTLLRHADQAMY 1100 Query: 831 ASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLW 890 +K+ G+ R +++P+ E L+ + + ++ + V + + Sbjct: 1101 LAKDAGKNRYQLFDPENDRKAQEHRQF-LELLRQALVHDEFALFYQPVVDLQ--SGEIIS 1157 Query: 891 LISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK-GISISLP 948 + +L W ++ F S L A V Q ++ + I IS Sbjct: 1158 VEALIRWRHPRRGLLAPAEFLPHLSGNELEAAFGLWVLDAALSQVSRWAEAGFHIKISTN 1217 Query: 949 LSVAGLSSATLVNDLLEQLENSP-LPPRLLHLIIPAEA---ILDHAESVQKLRLAGCRIV 1004 +S L L L P +PP L L I A + +Q+ R G Sbjct: 1218 VSTNYLLRTDFSQQLSTVLGRYPNVPPWHLELEIVESASGDVEQTIRVLQRCRELGVHFA 1277 Query: 1005 LSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGP 1064 L G L+ D L +D ++ G+ D ++ + A K IA Sbjct: 1278 LDDFGTGHASLTHLRRLPVDTLKIDNSFVHDMIGSQDDRRIVEGVIELASIFARKAIAEG 1337 Query: 1065 VVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 V L +G G IA D +++ Sbjct: 1338 VETMEHAALLRSLGCHYAQGFGIARPMEADKVMD 1371 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 110/713 (15%), Positives = 240/713 (33%), Gaps = 50/713 (7%) Query: 1 MSKQSQHVLIALPHPLLHLVSLGLVSFIFTLF-SLELSQFGTQLAPLWFPTSIMMVAFYR 59 M+ ++ I L L +L + F L L+ S+ ++ Sbjct: 1 MASNPRNRFILLAVSSYALFALAWIFFSDQLLAGLDASRVVPLSIAKGVFFVLVTSILLL 60 Query: 60 HAGRMWPGIALSCSLGNIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNP-- 117 A R P L + + ++ V GA+ LR+ L Sbjct: 61 LALRAVPSREGGAQLAWLGNLANGMRSERWTNWLAYPAVLALVAGALALRQFLMGPELGA 120 Query: 118 -----LQNLADWLRLALGSAIVPPLLGGV--LVVLLTPGDDPLRAFLIWVLSESIGALAL 170 L L L +G L + L V L A W + LAL Sbjct: 121 HPMLILFMLPIILGACMGGIGPGLLATVLSVLAVDLMVEPHLHAAQTPWHSKVQLLFLAL 180 Query: 171 VPLGLLFKPHYLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRL 230 L + L + L +LL ++ T + + + + + + + Sbjct: 181 NGLAVSLLCEMLRQALERVALHRALLDAVVSSTSDAVFVKDVQGRYLLVNQAALAFVGKT 240 Query: 231 PRMEAF---------LIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFL------- 274 ++ L+M + L + + + Sbjct: 241 SGEVIGKDDRDVFDEETARELIIQDRLIMQSGRVQTHEEHLALQNGERMVFLVTKGPVYN 300 Query: 275 --LILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALC 332 +L ++ + + + +SE + A + + IG + Sbjct: 301 HEGLLGGLFGISRDITRQKQAENQLRDSEAMLQQAQQLAGIGSWSWDLVDDRQSWSPEAY 360 Query: 333 QFLGYSQEELRGLTF--QQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWA 390 + G +++ ++ + + + VE+ + Y + +G+ W Sbjct: 361 RLFGLTEKSGPPGYPAMRRYFDADGWAQLSEAVERCKLVGMG-YECDVELLRADGESRWL 419 Query: 391 LLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPN 450 + R +G + ++DI E KR + R+ L EA G W+W+L+ Sbjct: 420 TMRGEARRDEEGAIVSLYGTMQDITERKRMAMQVKASESRLQLVAEATSDGFWDWDLRSG 479 Query: 451 IFSWDKRMFELYE-IPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSP-FKLEFRIT 508 R +E+ P +++ + + V P D + + I + ++P +++FR+ Sbjct: 480 KVYRSSRYYEVTGTQPEDDSGDFRFFRQMVHPADLPYVLQAIEAHRRGKTPRIEIDFRLA 539 Query: 509 VKD-GIRHIRALANRV-LNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGE 566 +D G+R ++A V ++ G RL+G D+TE K+ +E L + L+ G+ Sbjct: 540 RQDEGVRWLQARGRAVEWDERGAAVRLVGNLSDITERKRADEDL-------RLVLNEAGD 592 Query: 567 AVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRS 626 A+ D+ F NP A +++G + ++ + + ++ + L+ + + + Sbjct: 593 AIWVTDVDGYFIFANPAACRLTGHSLDDLREMHIHDLVAP---ECLGLLAEHLAKINNGA 649 Query: 627 AIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLS 679 + + L + G+ V + + + +D+TE + ++L Sbjct: 650 FLRSEWKLRLKKSGTVSVDLTSGKMKDG-----RYIAFGRDLTEQHRAEQELR 697 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 54/307 (17%), Positives = 111/307 (36%), Gaps = 17/307 (5%) Query: 282 IMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEE 341 + + + + E + S G E Q + LGY E Sbjct: 681 AFGRDLTEQHRAEQELRDRERQLARVIAGSDQGFWDWNLETNRFQVSPRWESMLGYGPGE 740 Query: 342 LR--GLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLV-R 398 + ++ + PED+ + +++ +SGE+ ++ +E R R GD W L +V R Sbjct: 741 MHITADSWYEHVHPEDVERTRDSIQRNLSGEMKSHEVEIRCRTRGGDWRWILSRGRVVER 800 Query: 399 HTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRM 458 + G PL DI E K EQ ++ ++ GI I + Sbjct: 801 NDRGEPLSMSGTHTDITERKVFEQTQKEAA----AVFDSSYEGILMVNPDGVITKVNNAF 856 Query: 459 FELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRA 518 + + + + + +S++ ++ E K G + Sbjct: 857 SRITGYSAEEAIGQKPSLLASGKQPIS-FYEELWNSVKGHDFWRGELWNRRKSGELYAEL 915 Query: 519 LA-NRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKER--------LHITLDSIGEAVV 569 L+ + V +++G+V+ +GI D+T++KQ L + + D + +A+V Sbjct: 916 LSISVVRDEQGQVQHYIGIFSDITQLKQHEAELDRVAHYDPLTGVPNRRLLSDRLRQAIV 975 Query: 570 CIDMAMK 576 + + + Sbjct: 976 RANRSGR 982 >UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21WS3_RHOFD Length = 1034 Score = 866 bits (2238), Expect = 0.0, Method: Composition-based stats. Identities = 147/701 (20%), Positives = 288/701 (41%), Gaps = 32/701 (4%) Query: 417 LKRTEQVNQQLMERITLANEAGGIGIWEW----ELKPNIFSWDKRMFELYEIPPHIK-PN 471 +R +Q + ++ ++++ + + +++ + P + Sbjct: 340 RRRHSTAQRQALVQLQSLTHHVPGVVFQYLLRPDGSSCFPFASAGLHKIFRLSPEAVAQD 399 Query: 472 WQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLNKEGEV 530 + + P+D I+ S ++ +P+ E+R+ DG +R + + A +G V Sbjct: 400 AAPLFALMHPDDAAGVAASIQASSRALTPWVDEYRVKFGDGTVRWLSSKAAPQKLDDGSV 459 Query: 531 ERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGW 590 G D+T KQ E+L L ++ ++V D I ++NP+ E++SG+ Sbjct: 460 L-WHGFVSDVTAHKQAEESLIT----LSAAVEQSPVSIVISDPRGLIEYVNPMFEQVSGY 514 Query: 591 TQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITP 650 + E +G + + + +++ + + + G + +I P Sbjct: 515 RRAEVMGQNPRIL--SSHEKSEDEYREMWATLLAGDIWHGEFHSRRKDGSLFWEQAAIAP 572 Query: 651 LSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNST 710 + G I + + +D+T+ + ++ + A +D LT L NR +L+ +L + Sbjct: 573 IFDDHGRPIHYLAIKEDITKRKAAEAEIEHLAFYDLLTGLPNRRLLNDRLQQVLAVGTRS 632 Query: 711 HQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLP 770 + AL+FIDLD FK +ND+ GH GD LL+++A + +R D +ARLGGD+F ++L Sbjct: 633 RRHGALLFIDLDNFKNLNDTQGHEQGDVLLQQVAQRLNFCVRECDTVARLGGDDFVVMLQ 692 Query: 771 DCNVE------SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQ 824 D + + A + +I+ A++ + + H AS G+ L + + E++ + Sbjct: 693 DLSEQQTEAATQAEGVGQKILDALHQ-PYPFGHFTHHGSASVGVALFNASQDTVEELLKR 751 Query: 825 ADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIP 884 AD+A Y +K+ GR + ++P A S RA M D + ++ENQ ++ + Sbjct: 752 ADLALYQAKDAGRNTLRFFDPDMQAVISARAEMEADMRL-GLQENQFLLYYQPQVN---H 807 Query: 885 EARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKG- 942 R + + +L W ++ F D L L + V +Q Sbjct: 808 AGRLIGVEALVRWQHPLRGLVAPAHFIPLAEDTGLILPLGQWVMEAACRQLQLWRTQAHT 867 Query: 943 --ISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKL 996 ++I++ +S + V+D+L L + P L L + ++ + + L Sbjct: 868 AQLTIAVNVSALQFHGESFVSDVLATLARTGAPADRLKLELTESLLVKDVDGVIAKMVAL 927 Query: 997 RLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRL 1056 + G L G + LK D + +D ++ N D L+ + L Sbjct: 928 KAHGVGFSLDDFGTGYSSLSYLKRLPLDQIKIDQSFVSDALSNPKDAALVRATVAMGRGL 987 Query: 1057 GMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 GM IA V + D L G G G P+ L Sbjct: 988 GMMVIAEGVETQMQRDFLEGEGCLNFQGYFFGRPVPVAELA 1028 Score = 142 bits (360), Expect = 6e-32, Method: Composition-based stats. Identities = 44/363 (12%), Positives = 102/363 (28%), Gaps = 7/363 (1%) Query: 178 KPHYLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFL 237 H L + P L + +A Sbjct: 358 THHVPGVVFQYLLRPDGSSCFPFASAGLHKIFRLSPEAVAQDAAPLF---ALMHPDDAAG 414 Query: 238 IFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHI 297 + + + + + L +++ + K Sbjct: 415 VAASIQASSRALTPWVDEYRVKFGDGTVRWLSSKAAPQKLDDGSVLWHGFVSDVTAHKQA 474 Query: 298 SESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLN 357 ES A+E S + + + G N Q GY + E+ G + L+ E Sbjct: 475 EESLITLSAAVEQSPVSIVISDPRGLIEYVNPMFEQVSGYRRAEVMGQNPRILSSHEKSE 534 Query: 358 KDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINEL 417 + +++ + + + E ++G + W A++ + G P++++A EDI + Sbjct: 535 DEYREMWATLLA-GDIWHGEFHSRRKDGSLFWEQAAIAPIFDDHGRPIHYLAIKEDITKR 593 Query: 418 KRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYE 477 K E + L L + + + + R + N++ + Sbjct: 594 KAAEAEIEHLAFYDLLTGLPNRRLL--NDRLQQVLAVGTRSRRHGALLFIDLDNFKNLND 651 Query: 478 CVLPEDRQHAEKVIRDSLQSR-SPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGI 536 E + + L R+ D + ++ L+ + + E + Sbjct: 652 TQGHEQGDVLLQQVAQRLNFCVRECDTVARLGGDDFVVMLQDLSEQQTEAATQAEGVGQK 711 Query: 537 NMD 539 +D Sbjct: 712 ILD 714 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 42/324 (12%), Positives = 90/324 (27%), Gaps = 21/324 (6%) Query: 234 EAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAE 293 L+ + D ++S + + +L+ I A R Sbjct: 291 YPVLVLVGLASKDVFAQQEDTLQHRVWEAVILSVLLLVLGVLLSWYVVIRRRHSTAQRQA 350 Query: 294 RKHISESETHFRNAMEYSAIGMALV----GTEGQWLQTNKALCQFLGYSQEELR--GLTF 347 ++ + + + + L + S E + Sbjct: 351 -------LVQLQSLTHHVPGVVFQYLLRPDGSSCFPFASAGLHKIFRLSPEAVAQDAAPL 403 Query: 348 QQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYF 407 L P+D ++ + E R +G V W + + DG+ L+ Sbjct: 404 FALMHPDDAAGVAASIQASSRALT-PWVDEYRVKFGDGTVRWLSSKAAPQKLDDGSVLWH 462 Query: 408 IAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPH 467 + D+ K+ E+ ++ A E + I + + I + ++ Sbjct: 463 -GFVSDVTAHKQAEESLIT----LSAAVEQSPVSIVISDPRGLIEYVNPMFEQVSGYRRA 517 Query: 468 IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALAN-RVLNK 526 E + + + +L + + EF KDG A + + Sbjct: 518 EVMGQNPRILSSH-EKSEDEYREMWATLLAGDIWHGEFHSRRKDGSLFWEQAAIAPIFDD 576 Query: 527 EGEVERLLGINMDMTEVKQLNEAL 550 G L I D+T+ K + Sbjct: 577 HGRPIHYLAIKEDITKRKAAEAEI 600 >UniRef50_Q5P8Z7 Sensory box/GGDEF family protein n=3 Tax=cellular organisms RepID=Q5P8Z7_AZOSE Length = 1008 Score = 864 bits (2234), Expect = 0.0, Method: Composition-based stats. Identities = 177/838 (21%), Positives = 317/838 (37%), Gaps = 54/838 (6%) Query: 282 IMTMVMYAFRAERKH---ISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYS 338 + + + + ++ T + ++ G +VG + N AL + G Sbjct: 160 LTYTDINRVKTAQTEVAVLAAERTRLQGILDALPDGAYIVGADHVIEYFNPALERQFGAP 219 Query: 339 QEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVR 398 G + + + +G S++ + +G L R Sbjct: 220 A----GRKCFEYLHGRSEACTWCNNDAVFAGA----SLQAEWTAPSGRSY--DLFEMPFR 269 Query: 399 HTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRM 458 + DGT F DI +K + ++ A +G WEW+L + W ++ Sbjct: 270 NPDGTLSKFE-IFHDITPVK-------ESRRQLAEATLLAHVGYWEWQLPAGVLHWGEQT 321 Query: 459 FELYEI-PPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHI 516 L P + P+ + V P+DR+ +++++ + EFR+ DG +R Sbjct: 322 DRLLGHAPGKVTPSGATFLAHVHPDDRERVAGEFAGAVRNQCSYVSEFRLIRADGALRIA 381 Query: 517 RALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCID-MAM 575 RA + ++EG R+ G D+TE++ AL +ER I + + AV Sbjct: 382 RANGHLQYDREGRAVRVCGAIQDITELRATETALRNSEERFSIAMTAAPFAVAITRVEDG 441 Query: 576 KITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLH 635 + +N E GW +EE +G + ++ + S ++ + + Sbjct: 442 RFVEVNDKYELHFGWKREELIGKTSVETNLWPDPESRQRWLEMLRQ--HGSVLDFETLGC 499 Query: 636 CRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRAS 695 R+G V S + +DG + + D+T+ ++ ++ Y A HDALT L NR Sbjct: 500 ERNGAVRQVSLSSRYI-DIDGE-KHVLTFVHDITDRKEAQARIEYLAHHDALTGLPNRVL 557 Query: 696 FEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSD 755 F + + H + AL+F+DLD FK +ND+ GH GD LL+ +A + LR +D Sbjct: 558 FRDRFALATAWAERAHAKVALLFVDLDHFKTINDTLGHPVGDGLLQGVALRLRECLRETD 617 Query: 756 VLARLGGDEFGLLLPDCNVESARFIA-TRIISAVNDYHFIWEGRVHRVGASAGITLIDDN 814 ++RLGGDEF + L D A A +I + F EG S GI + D+ Sbjct: 618 TVSRLGGDEFLIALTDIRDPQAINSATAKIFDTLTR-PFELEGHELTNTMSIGIAIWPDD 676 Query: 815 NHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMML 874 ++ AD A Y +K GR Y Q A E+ + ++ ++ ++ Sbjct: 677 GEDFDTLLKNADTAMYQAKRAGRNTWRFYTEQMNANAVEQLQLRTAL-HSALENDEFLLH 735 Query: 875 AHGVASPRIPEARNLWLISLKLWS-CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQ 933 + + + + +L W + E++ F + + L + V E Q Sbjct: 736 YQPQIN--LASGHVVGVEALLRWHWDKRELVPPDRFIPAAEESGLIVPIGDWVLREACMQ 793 Query: 934 AAKA--VASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRL-----------LHLI 980 A + ++I++ LS L ++ L S L P + Sbjct: 794 AVRWTRQGLPELTIAVNLSAVQFRRGDLERSVVRALSLSGLDPARLELELTESLLLVD-- 851 Query: 981 IPAEAILDHAESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNL 1040 I E++++L+ G R+ + G LK D L +D ++ + Sbjct: 852 -TESVI----ETLRRLKSLGVRLSIDDFGTGYSSLAYLKRFAVDKLKIDQSFVRDIATDP 906 Query: 1041 MDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 D ++ I A L ++ IA V + L D G A P D L Sbjct: 907 DDAAIVRAIVSMAHTLKLQVIAEGVESEDIDRFLHIFNCDEAQGYHYARPMPGDALAE 964 Score = 119 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 45/400 (11%), Positives = 111/400 (27%), Gaps = 26/400 (6%) Query: 283 MTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEEL 342 + ++ ++ + + + + IG + + + + A+ L + Sbjct: 40 LYILNRELEDRNAALANLNRDYDHLLASTKIGTVFLDAGLRVRRFSAAVEDVLALRASDA 99 Query: 343 RGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDG 402 G ++T+ + ++ E + W L + G Sbjct: 100 -GRPLAEITYRAGDASRFLADLQHVATTGEGREREV-----DVGGRWYLERMLPFHGEGG 153 Query: 403 TPLYFIAQIEDINELKRTEQV---NQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMF 459 + DIN +K + R+ +A G + I ++ + Sbjct: 154 VRDGVVLTYTDINRVKTAQTEVAVLAAERTRLQGILDALPDGAYIVGADHVIEYFNPALE 213 Query: 460 ELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRAL 519 + P + +E + + D++ + + + E+ R Sbjct: 214 RQFGAPA-----GRKCFEYLHGRS-EACTWCNNDAVFAGASLQAEW---TAPSGRSYDLF 264 Query: 520 ANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITF 579 N +G + + I D+T VK+ L + + + Sbjct: 265 EMPFRNPDGTLSKF-EIFHDITPVKESRRQLAEATLLA-------HVGYWEWQLPAGVLH 316 Query: 580 MNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSG 639 +++ G + + H+ D + A ++ + + L G Sbjct: 317 WGEQTDRLLGHAPGKVTPSGATFLAHVHPDDRERVAGEFAGAVRNQCSYVSEFRLIRADG 376 Query: 640 GSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLS 679 + +G + IQD+TE R L Sbjct: 377 ALRIARANGHLQYDREGRAVRVCGAIQDITELRATETALR 416 >UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L987_TOLAT Length = 1098 Score = 864 bits (2233), Expect = 0.0, Method: Composition-based stats. Identities = 155/707 (21%), Positives = 270/707 (38%), Gaps = 25/707 (3%) Query: 404 PLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELK--PNIFSWDKRMFEL 461 Y + + E Q E +A ++ W+ + + Sbjct: 381 VTYALDMLLQAKERANALIALQNAAE----VIDASPTILFRWQPNSSWKMEYVSSNVQRW 436 Query: 462 YEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRS-PFKLEFRITVKDGIR-HIRAL 519 + + PED Q + +++R + LE R+ G + Sbjct: 437 GYQADDFINGKLTMSDLLHPEDLQRVWAEVIHHIETRHKEYILECRVRTAAGEYLWVENH 496 Query: 520 ANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITF 579 +++G+ +R G+ D+T+ K L + I +S E +V D I Sbjct: 497 VTTSFDRKGKPQRFTGVMTDITQQKNNELQL----RQAAIVFESTREGIVITDAERNIIK 552 Query: 580 MNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSG 639 +N + G+ + E LG + +G + + A ++ ++G Sbjct: 553 VNRALIDLFGYPENELLGQRPRIFH--SGKHDGHFYQQMLQALDEHGFWRGEMWNRRQNG 610 Query: 640 GSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQ 699 + SI P+ +G + + + D+++ + +L + A HD LT L NRA ++ Sbjct: 611 ELLPMMTSINPVCDSNGEILYYISIYTDISQLKDSEARLEHMALHDPLTGLPNRAMLGQK 670 Query: 700 LRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLAR 759 L LQ R AL+ +DLD FK VNDS GH GD LL ++++ + LR SDV+ R Sbjct: 671 LDSALQHAMLNSTRVALLMLDLDHFKNVNDSFGHHFGDELLHQVSARLKQQLRESDVVCR 730 Query: 760 LGGDEFGLLL-PDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQA 818 LGGDEF +LL + + + +A RII A++ + R +G S GI+L ++ A Sbjct: 731 LGGDEFTVLLQNNPSPDDVSLLAERIIHALHQPFLLSNAREVMIGTSIGISLYPEHGSTA 790 Query: 819 AEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGV 878 E+M QAD A Y +K+ GR + + R + R I + + Sbjct: 791 EELMQQADTAMYRAKHDGRDGYRYFSEELFLKAKARLELEQ-RLHRAITGQEFKVFYQPQ 849 Query: 879 ASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA 937 S + + + +L W E +I F + L + V +E +Q Sbjct: 850 ISIK--TNQIIGAEALLRWDDPEYGLIPPSEFISVAEETGLIQNIGEWVLYETCRQGRDW 907 Query: 938 VAS--KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES--- 992 + I++++ LS L + + L NS P L L + A+++ E Sbjct: 908 LDQHLPPINLAVNLSPLQLHHGDVRQLIGTILHNSGFPAHHLELELTESALMEQQEETVK 967 Query: 993 -VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQG 1051 +Q LR G RI + G LK D L +D ++ D + I Sbjct: 968 ILQGLRQQGIRIAIDDFGTGYSSLAYLKQFPLDVLKIDKRFVEDIPHERDDMEIAATIVA 1027 Query: 1052 HAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 L + +A V ++ L G D G + + P + Sbjct: 1028 MGHSLRLTVLAEGVETKAQLEFLEQQGCDYYQGYLYSMPLPAEEFAQ 1074 Score = 152 bits (386), Expect = 5e-35, Method: Composition-based stats. Identities = 90/534 (16%), Positives = 182/534 (34%), Gaps = 83/534 (15%) Query: 226 SAVRLPRMEAF-LIFLTTVMMVSLMMAADPSLLATPR---------TYLMSHMPWLPFLL 275 + ++P A ++ TV+ V+ + SL + T+ +S ++ + Sbjct: 4 ATAQIPLRTATRIMLFYTVLSVAWFYFSGYSLSPSATKGAPPFDSLTFWVSLTTFITGIT 63 Query: 276 ILLPANIMTMVMYAFRAER--KHISESETHFRNAMEYSAIGMALV-GTEGQWLQTNKALC 332 + + ++ Y + + ++E + + + +GMA+ G WL+ N L Sbjct: 64 VGVFFLLVWRQHYMQHRQALSRRVAEKDRLLHHFFDLPLLGMAITTNANGSWLRFNDHLS 123 Query: 333 QFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALL 392 S++EL L LT P+D D Q+ ++ GE Y EKR+ +G +++AL+ Sbjct: 124 TLFNLSRDELAELNLLALTHPDDRPYDRQEWMRMQDGESQGYRREKRFVRPDGSMLFALV 183 Query: 393 AVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQL---------------MERITLANEA 437 +RH DG+ I IEDI+ K +E + + L Sbjct: 184 DTRCIRHPDGSIDCMINVIEDISARKNSELRLIRQNNLYDMLSLTNQAIVRSQDRLVLLQ 243 Query: 438 GGIGIWEWELKPNIFSWDKRMFE-----------------LYEIPPHIKPNWQVWYECVL 480 I E + + + + ++ Sbjct: 244 NICRIAVRNGGFVFAWVSATEQEHSSHVASYGHDNGFLQFIRDYQQQHRLSAGSHAPVLM 303 Query: 481 PEDRQHAEKV---IRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGIN 537 P DR A + + L S T ++ V+ ++G+V L + Sbjct: 304 PTDRAIAAESHVILNHFLTDESVQPFHEAATRAG----FQSAGYFVIREKGQVIGALNLY 359 Query: 538 MD----------------MTEVKQLNEALFQEKERLHI--TLDSIGEAV---------VC 570 D + +V + L Q KER + L + E + Sbjct: 360 ADEPDFFSPEVRATLNDMVMDVTYALDMLLQAKERANALIALQNAAEVIDASPTILFRWQ 419 Query: 571 IDMAMKITFMNPVAEKMSGWTQEEAL-GV-PLLTVLHITFGDNGPLMENIYSADTSRSAI 628 + + K+ +++ ++ G+ ++ + G + +LH E I+ +T Sbjct: 420 PNSSWKMEYVSSNVQR-WGYQADDFINGKLTMSDLLHPEDLQ-RVWAEVIHHIETRHKEY 477 Query: 629 EQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSA 682 + + +G V +T G V+ D+T+ + QL +A Sbjct: 478 ILECRVRTAAGEYLWVENHVTTSFDRKGKPQRFTGVMTDITQQKNNELQLRQAA 531 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 57/340 (16%), Positives = 114/340 (33%), Gaps = 35/340 (10%) Query: 284 TMVMYAFRAERKHISESETHFRNAMEYSAIGMALV--GTEGQWLQTNKALCQFLGYSQEE 341 + M ER + + + ++ S + + + + + + GY ++ Sbjct: 384 ALDMLLQAKERANALIALQNAAEVIDASPTILFRWQPNSSWKMEYVSSNVQR-WGYQADD 442 Query: 342 LR-GL-TFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRH 399 G T L PEDL + +V I Y +E R G+ +W V+ Sbjct: 443 FINGKLTMSDLLHPEDLQRVWAEVIHHIETRHKEYILECRVRTAAGEYLWVENHVTTSFD 502 Query: 400 TDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMF 459 G P F + DI + K E +Q + E+ GI + + NI ++ + Sbjct: 503 RKGKPQRFTGVMTDITQQKNNELQLRQAA----IVFESTREGIVITDAERNIIKVNRALI 558 Query: 460 ELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRAL 519 +L+ P + + D H + + +L ++ E ++G Sbjct: 559 DLFGYPENELLGQRPRIFHSGKHD-GHFYQQMLQALDEHGFWRGEMWNRRQNGELLPMMT 617 Query: 520 AN-RVLNKEGEVERLLGINMDMTEVKQLNEAL--------------------FQEKERLH 558 + V + GE+ + I D++++K L + H Sbjct: 618 SINPVCDSNGEILYYISIYTDISQLKDSEARLEHMALHDPLTGLPNRAMLGQKLDSALQH 677 Query: 559 ITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGV 598 L+S A++ +D+ +N G +E L Sbjct: 678 AMLNSTRVALLMLDLD-HFKNVNDSFGHHFG---DELLHQ 713 >UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=B3E661_GEOLS Length = 1027 Score = 863 bits (2232), Expect = 0.0, Method: Composition-based stats. Identities = 153/779 (19%), Positives = 295/779 (37%), Gaps = 53/779 (6%) Query: 342 LRGLT-FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHT 400 + G+ + DL + K + T+S + L++S + Sbjct: 267 VLGMDRPLVIAVSRDLKQLHAGWHKHAVNQAITFS------------IIVALSISAL--- 311 Query: 401 DGTPLYFIAQIEDINELKRT-EQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMF 459 + F + R EQ +++ + ++ + + W++ + Sbjct: 312 ----IGFQGYQREQLAKARAVEQALLDARQQLNDIIDFFPDAVFVIDRNKRVTIWNRAIE 367 Query: 460 ELYEIPPHIKPNWQVWYECVLPEDRQHAEKV-------------IRDSLQSRSPFKLEFR 506 ++ +P + ++ + + + + E Sbjct: 368 KMSGVPKEEMLGKGDHEYSIPFYGQRRTQLLDLLDLDDAELAAKYSNIRRVGEVLDAETF 427 Query: 507 I--TVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSI 564 ++ A + N GE + D+++ KQ L ++L +++ Sbjct: 428 CPALHDGKGAYVWATGVPLYNAAGERIGAIEAIRDISDRKQSELFL----KKLTHGIENS 483 Query: 565 GEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTS 624 AVV D I ++N +++G++ EEA+G + + + +++ S Sbjct: 484 ASAVVITDTQGVIEYVNKKFIQLTGFSLEEAVGKNPRILK--SEATPPEVFVDLWKTILS 541 Query: 625 RSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASH 684 +++ ++G Y SI+PL G + ++D+ E + + + A Sbjct: 542 GREWRGELLNRRKNGEVYWSITSISPLRNDSGEITHFIANVEDINERKNAEATIEHLAYF 601 Query: 685 DALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELA 744 D LT L NR + +L + L+ AL+++DLD FK VNDS GH AGD LL+E+A Sbjct: 602 DPLTDLPNRRMLQDRLELALRRSRRHGSNVALMYLDLDSFKHVNDSMGHPAGDLLLKEMA 661 Query: 745 SLMLSMLRSSDVLARLGGDEFGLLLPDCNVE-SARFIATRIISAVNDYHFIWEGRVHRVG 803 ++R DV+ RLGGDEF L+L D + + IA ++I AV +GR V Sbjct: 662 GRFSGVVRDDDVVCRLGGDEFALILHDIHQDQDVVPIAQKLIEAVAQ-PVPLDGREVVVT 720 Query: 804 ASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQW 863 AS GI L + + ADIA Y +K G+ Y + + S R A+ ++ Sbjct: 721 ASIGIALFPRDGGDVKNLEKHADIALYHAKEEGKNTFRFYLEELNSTISTRIALEQGLRY 780 Query: 864 RMIKENQLMMLAHGVASPRIPEARNLWLISLKLWS-CEGEIIDEQTFRRSFSDPALSHAL 922 + +L + + + +L W + ++ F L + Sbjct: 781 -AKERQELELHYQPKVCV--ASGKVSGVEALLRWHSPDFGLVSPIRFIPLAEQTRLIIPI 837 Query: 923 DRRVFHEFFQQAAKAVASK-GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLII 981 V Q + +++++ LS L S LV + ++ + + P L L + Sbjct: 838 GEWVLRTACLQQVQWREQGLLLNMAVNLSAIQLKSPGLVERVAAIIDETGIQPEHLELEL 897 Query: 982 PAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQ 1037 A++++ + +++LR GC I + G + LK+ L +D ++ Sbjct: 898 TESALVNNPDEVVQLLERLRTLGCSISIDDFGTGYSSLSYLKSFPVTILKIDRSFVRDLA 957 Query: 1038 GNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 N D + + A L MKT+A V + L IG I G + + D + Sbjct: 958 HNSGDRAIARSVVDLANNLDMKTVAEGVESEEQLTILQQIGCTYIQGFIYSRPVQADQV 1016 Score = 139 bits (352), Expect = 5e-31, Method: Composition-based stats. Identities = 46/345 (13%), Positives = 110/345 (31%), Gaps = 26/345 (7%) Query: 222 LLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPAN 281 L+ S V+L + + V + A A + S + L ++ Sbjct: 257 LMALSTVQLAVLGMDRPLVIAVSRDLKQLHAGWHKHAVNQAITFSIIVALSISALIGFQG 316 Query: 282 IMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEE 341 + RA + + ++ + +++ + ++ + N+A+ + G +EE Sbjct: 317 YQREQLAKARAVEQALLDARQQLNDIIDFFPDAVFVIDRNKRVTIWNRAIEKMSGVPKEE 376 Query: 342 LRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYN--------------RNGDV 387 + G + + P + Q ++ L + + +G Sbjct: 377 MLGKGDHEYSIPFYGQRRTQLLDLLDLDDAELAAKYSNIRRVGEVLDAETFCPALHDGKG 436 Query: 388 VWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWEL 447 + + + G + I I DI++ K++E ++L E + + Sbjct: 437 AYVWATGVPLYNAAGERIGAIEAIRDISDRKQSELFLKKLTHG----IENSASAVVITDT 492 Query: 448 KPNIFSWDKRMFELYEIPPHIKPNWQVWY---ECVLPEDRQHAEKVIRDSLQSRSPFKLE 504 + I +K+ +L E PE + ++ S ++ E Sbjct: 493 QGVIEYVNKKFIQLTGFSLEEAVGKNPRILKSEATPPE----VFVDLWKTILSGREWRGE 548 Query: 505 FRITVKDGIRHIRALA-NRVLNKEGEVERLLGINMDMTEVKQLNE 548 K+G + + + + N GE+ + D+ E K Sbjct: 549 LLNRRKNGEVYWSITSISPLRNDSGEITHFIANVEDINERKNAEA 593 Score = 122 bits (307), Expect = 8e-26, Method: Composition-based stats. Identities = 42/180 (23%), Positives = 69/180 (38%), Gaps = 5/180 (2%) Query: 266 SHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNA---MEYSAIGMALVGTEG 322 W + + A + A R +SE + +E SA + + T+G Sbjct: 436 GAYVWATGVPLYNAAGERIGAIEAIRDISDR-KQSELFLKKLTHGIENSASAVVITDTQG 494 Query: 323 QWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYN 382 NK Q G+S EE G + L + + K I + E Sbjct: 495 VIEYVNKKFIQLTGFSLEEAVGKNPRILKSEATPPEVFVDLWKTILSGRE-WRGELLNRR 553 Query: 383 RNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGI 442 +NG+V W++ ++S +R+ G +FIA +EDINE K E + L L + + Sbjct: 554 KNGEVYWSITSISPLRNDSGEITHFIANVEDINERKNAEATIEHLAYFDPLTDLPNRRML 613 >UniRef50_B2JAQ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=Nostocaceae RepID=B2JAQ5_NOSP7 Length = 1043 Score = 863 bits (2231), Expect = 0.0, Method: Composition-based stats. Identities = 167/811 (20%), Positives = 304/811 (37%), Gaps = 24/811 (2%) Query: 301 ETHFRNAMEYSAIGMALVGT---EGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLN 357 A+ S+ G+ L + + N A GY E+ G + L + Sbjct: 227 LHLMERAIAASSNGIILTDPNQPDNPIIYVNPAFELITGYCASEVIGRNCRFLQGNDLEQ 286 Query: 358 KDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINEL 417 LQ++ I + + + R Y ++ + W L ++ V G FI DI Sbjct: 287 VALQELRSAIQEQRECHVI-LRNYRKDNFLFWNELYLAPVFDNSGYLTNFIGIQTDITHH 345 Query: 418 KRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYE 477 + + + E+ + GIW + +++M + ++ Sbjct: 346 LQALEALGKQEEQYRRIVQTATEGIWLLDKDNCTTFVNQQMATMLGYTIEEMLGATLF-S 404 Query: 478 CVLPEDRQHAEKVI-RDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGI 536 + E + A + R + +FR +L+ +G LG+ Sbjct: 405 FMDSEGLEIANSCLSRRYQGIQEAHDFKFRCQ-DGSDLWAIISCAPLLDDQGNYAGALGM 463 Query: 537 NMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMA-MKITFMNPVAEKMSGWTQEEA 595 ++T+ K AL + K+RL L S+ + + I + ++NP A K+ G++ E Sbjct: 464 VTNITDRKLAEAALQESKQRLDGILCSLEDVIWSISADTFETLYLNPAALKVYGYSVSEF 523 Query: 596 LGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLD 655 + ++ + E + + G + + Sbjct: 524 F-ENSNLWFEVIHPEDQQQVHAAIQPLFLTEKQELEYRIVRPDGQVRWLLNRSHLIYNAS 582 Query: 656 GSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNST-HQRH 714 G I + D+TE + + +L ++A +DALT L NR F +L + + Sbjct: 583 GLPIRIDGIATDITERKLLEEKLVHNAFYDALTGLPNRILFIDRLEQAIAQMKHNPDDLF 642 Query: 715 ALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-N 773 A++F+DLDRFK VNDS GH GD LL LA + L+ D +ARLGGDEF +LL Sbjct: 643 AVLFLDLDRFKVVNDSLGHLVGDQLLVTLAQRLQQCLQPDDTVARLGGDEFTILLSHIQT 702 Query: 774 VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASK 833 +E A IA I A+ F G + AS GI L + Q A+++ AD A Y +K Sbjct: 703 IEDATDIAKHIHQAL-KPPFNLCGYEVFMTASIGIALGTNKYVQPADLLRDADTALYRAK 761 Query: 834 NGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLIS 893 + V++ E + D +W ++ +L + + + + + Sbjct: 762 EQSQAGHIVFDTTMYDRAVELLQLETDLRW-AVERQELCIFYQPIICIK--TGKITGFEA 818 Query: 894 LKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV----ASKGISISLP 948 L W E +I F + L + + V E +Q + A K +++++ Sbjct: 819 LVRWQHPERGLISPTEFIPVAEETGLIIPIGQWVLTESCKQLRQWQLQFPAIKPLTLNVN 878 Query: 949 LSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIV 1004 LS S L+ + + L+++ L L L I AI+ + +++L+ G ++ Sbjct: 879 LSGKQFSQPHLIEQISQILQDTGLSSSNLKLEITETAIIASPQKATSILKQLKAFGLQLC 938 Query: 1005 LSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGP 1064 + G L D L +D + + ++ I A LGM +A Sbjct: 939 IDDFGTGYSSLAYLHNFPIDVLKIDRSFVNRIDSDTEQFAIVRAIVTLADNLGMSVVAEG 998 Query: 1065 VVLPLVMDTLSGIGVDLIYGEVIADAQPLDL 1095 V + L + G + + + Sbjct: 999 VETINQLAQLQLLQCQQAQGYLFSKPLDQEQ 1029 Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats. Identities = 62/337 (18%), Positives = 128/337 (37%), Gaps = 28/337 (8%) Query: 277 LLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLG 336 L + + + + + E +R ++ + G+ L+ + N+ + LG Sbjct: 332 LTNFIGIQTDITHHLQALEALGKQEEQYRRIVQTATEGIWLLDKDNCTTFVNQQMATMLG 391 Query: 337 YSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSL 396 Y+ EE+ G T E L + + G + + ++ ++G +WA+++ + Sbjct: 392 YTIEEMLGATLFSFMDSEGLEIANSCLSRRYQGIQEAH--DFKFRCQDGSDLWAIISCAP 449 Query: 397 VRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELK-PNIFSWD 455 + G + + +I + K E Q+ +R+ + IW + Sbjct: 450 LLDDQGNYAGALGMVTNITDRKLAEAALQESKQRLDGILCSLEDVIWSISADTFETLYLN 509 Query: 456 KRMFELYEIP-PHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-I 513 ++Y N +W+E + PED+Q I+ + +LE+RI DG + Sbjct: 510 PAALKVYGYSVSEFFENSNLWFEVIHPEDQQQVHAAIQPLFLTEK-QELEYRIVRPDGQV 568 Query: 514 RHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEK---------------ERLH 558 R + ++ + N G R+ GI D+TE K L E L +RL Sbjct: 569 RWLLNRSHLIYNASGLPIRIDGIATDITERKLLEEKLVHNAFYDALTGLPNRILFIDRLE 628 Query: 559 ITLDSI---GE---AVVCIDMAMKITFMNPVAEKMSG 589 + + + AV+ +D+ + +N + G Sbjct: 629 QAIAQMKHNPDDLFAVLFLDLD-RFKVVNDSLGHLVG 664 >UniRef50_Q47HF3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q47HF3_DECAR Length = 994 Score = 862 bits (2228), Expect = 0.0, Method: Composition-based stats. Identities = 146/694 (21%), Positives = 268/694 (38%), Gaps = 22/694 (3%) Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQV 474 E++R N QL +TLA E G GIWE + N W + + ++ Sbjct: 158 QEVERRIAENTQLDRHLTLALERSGFGIWEHDPVRNRNRWSEGLRQMLGY-EQEPEQLAE 216 Query: 475 WYECVLPEDRQHAEKVIRDSLQSRSPFKL-EFRITVKDGIRHIRALANRV--LNKEGEVE 531 + PEDR E + SL+ R+ + EFRI DG R+ ++ G+ Sbjct: 217 SMNLIHPEDRPAVEAQVTASLRDRNSILIGEFRIRHHDGGWRWVESRGRIVEFDEAGQPT 276 Query: 532 RLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWT 591 ++G +D+TE K + IGE + D I +N ++G+ Sbjct: 277 LMIGTMLDITERKLAEAE----HRLADLVFTGIGEGICITDAKRNILRINDAFSTITGYQ 332 Query: 592 QEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPL 651 +E +G + + + I+ + ++ + G SI+ L Sbjct: 333 ADEIVGQNPRLLK--SGVHSPAFYAEIWKTIDQYGNWQGEITNRHKDGSLVTEWLSISSL 390 Query: 652 STLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTH 711 G+ + + D++E + ++ Y +S+D LT L NR F+ +L L T Sbjct: 391 RDTTGTASHYIGIFSDLSERQAAAERIQYLSSYDTLTELPNRHLFDDRLNQALLTARRFE 450 Query: 712 QRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD 771 + AL+ +DL+RF+ +ND+ G AGD +L E+ + +R D + R G+EFG ++ + Sbjct: 451 RGTALILLDLNRFRLINDTLGPPAGDEILVEVTRRLKLQVREGDTVGRRAGNEFGFVMAN 510 Query: 772 CNVE-SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACY 830 + E A +A R++ A++ F G+ + AS GI++ N ++ AD A Sbjct: 511 LSHERDALALAQRMLDAIS-VPFSVAGQSVAITASIGISVFPKNGENGEAMLRSADAALL 569 Query: 831 ASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLW 890 +K GR + Y P+ A + R ++ + + ++ + S + + Sbjct: 570 RAKQSGRNTFSFYSPEMDADAARRLSIESALR-DALARDEFCVHYQPQVS--LDSGHMIG 626 Query: 891 LISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK--GISISL 947 + +L W+ I F + L + V Q + + +++ Sbjct: 627 MEALLRWNSALLGPISPVEFIPIAEETGLIMQIGDWVLRTACHQTKAWLDLGLLPLHVAV 686 Query: 948 PLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESV----QKLRLAGCRI 1003 LS A L + L S LP L L I A +D + KL+ G ++ Sbjct: 687 NLSPRQFRQADLPAQVAHALAESGLPAGALELEITESAFIDDIDDAVAMCSKLKSLGIKL 746 Query: 1004 VLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAG 1063 L G + D + +D ++ N ++ + + + L + +A Sbjct: 747 SLDDFGTGYSSLAYVSRFPFDKIKIDQSFVRDIVNNPVNAAIASAAIVMGRSLNLSVLAE 806 Query: 1064 PVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 V L D I G + + P + Sbjct: 807 GVETEAQAAFLRSRRCDAIQGYLFSRPLPPEEFA 840 Score = 147 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 91/283 (32%), Gaps = 15/283 (5%) Query: 275 LILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQF 334 L AN + ++ + H A+E S G+ + ++ L Q Sbjct: 145 AQWLLANQKAWLEQEVERRIAENTQLDRHLTLALERSGFGIWEHDPVRNRNRWSEGLRQM 204 Query: 335 LGYSQE-ELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLA 393 LGY QE E + L PED QV + + E R + +G W Sbjct: 205 LGYEQEPEQLAESM-NLIHPEDRPAVEAQVTASLRDRNSILIGEFRIRHHDGGWRWVESR 263 Query: 394 VSLV-RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERIT-LANEAGGIGIWEWELKPNI 451 +V G P I + DI E K + R+ L G GI + K NI Sbjct: 264 GRIVEFDEAGQPTLMIGTMLDITERK-----LAEAEHRLADLVFTGIGEGICITDAKRNI 318 Query: 452 FSWDKRMFELYEIPPHIKPNW--QVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITV 509 + + ++ V I ++ ++ E Sbjct: 319 LRINDAFSTITGYQADEIVGQNPRLLKSGVHS---PAFYAEIWKTIDQYGNWQGEITNRH 375 Query: 510 KDGIRHIRALA-NRVLNKEGEVERLLGINMDMTEVKQLNEALF 551 KDG L+ + + + G +GI D++E + E + Sbjct: 376 KDGSLVTEWLSISSLRDTTGTASHYIGIFSDLSERQAAAERIQ 418 Score = 139 bits (351), Expect = 7e-31, Method: Composition-based stats. Identities = 37/248 (14%), Positives = 86/248 (34%), Gaps = 4/248 (1%) Query: 288 YAFRAERKHISESETHFR-NAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + ++E+E G+ + + L+ N A GY +E+ G Sbjct: 281 TMLDITERKLAEAEHRLADLVFTGIGEGICITDAKRNILRINDAFSTITGYQADEIVGQN 340 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 + L ++ K I + + E +++G +V L++S +R T GT + Sbjct: 341 PRLLKSGVHSPAFYAEIWKTI-DQYGNWQGEITNRHKDGSLVTEWLSISSLRDTTGTASH 399 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP 466 +I D++E + + Q L TL E +++ L + + +R + Sbjct: 400 YIGIFSDLSERQAAAERIQYLSSYDTLT-ELPNRHLFDDRLNQALLTA-RRFERGTALIL 457 Query: 467 HIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNK 526 +++ + + P + L+ + + + A + + Sbjct: 458 LDLNRFRLINDTLGPPAGDEILVEVTRRLKLQVREGDTVGRRAGNEFGFVMANLSHERDA 517 Query: 527 EGEVERLL 534 +R+L Sbjct: 518 LALAQRML 525 >UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47BF2_DECAR Length = 1038 Score = 862 bits (2227), Expect = 0.0, Method: Composition-based stats. Identities = 136/712 (19%), Positives = 270/712 (37%), Gaps = 35/712 (4%) Query: 404 PLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYE 463 L +A I + ++ ++ G G++ + + + E+ Sbjct: 332 ILSMLAVAYLIRSKRLVGAALRERA----SLLDSLGEGVYGIDQNGQCTFINPKALEMLG 387 Query: 464 IPPHIKPNWQVWYECVL--PED--RQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRAL 519 P+ A+ + +L+ + E KDG Sbjct: 388 WTADEVIGSDQHARFHHHRPDGSIYPSADCPVYQTLRDGQRRQGEEWFFNKDGRGFPVQY 447 Query: 520 ANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITF 579 + ++++ + E + D++E ++ +E + I + EA++ D +I Sbjct: 448 SVTPISRQEDKEGAVVTFRDISEARKADELM----RIAAIAFE-TQEAMLVTDAKSQILR 502 Query: 580 MNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSG 639 +N +++G++ EA+G + D+ ++++++ ++ ++G Sbjct: 503 VNRAFTEVTGYSAAEAIGQTPALLKSGYHEDS--FYKDLWTSLKENGLWRGEIWNRRKNG 560 Query: 640 GSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQ 699 Y +I+ + G V D+T+ ++ Q+ + A +D LTHL NR ++ Sbjct: 561 EIYPEWLTISAVRGQHGEITHFVSSFLDITKRKEAEEQIQFLALYDPLTHLPNRRLLNER 620 Query: 700 LRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLAR 759 L L + + AL+FIDLD FK +NDS GH GD LLR++A + +RS+D ++R Sbjct: 621 LSKALTSSGRQRRHAALLFIDLDNFKMINDSMGHDIGDLLLRQVALRLRESVRSNDTVSR 680 Query: 760 LGGDEFGLLLPDCNVE------SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDD 813 LGGDEF +LL + + IA +++ ++ + + H AS G D Sbjct: 681 LGGDEFVILLEELSPNIHDATTQIEHIAQKMLDSLVQ-PYKFGEFSHHCTASIGAIPFMD 739 Query: 814 NNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMM 873 ++ AD+A Y +K G+ R+ ++P RAA+ D + + +E Q ++ Sbjct: 740 ATETIESLLKSADMAMYKAKAAGKNRLFFFDPAMQTEVEARAALERDLR-QAQREKQFVL 798 Query: 874 LAHGVASPRIPEARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQ 932 +L W +I F + L + + V E + Sbjct: 799 YLQPQVD---QSGHVSGAEALIRWQHPTHGLILPGEFTHVAEETRLILPIGQWVLEEACK 855 Query: 933 QAAKAVASKG---ISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH 989 Q + +++++ +S + V+D+ + S L L I +L+ Sbjct: 856 QLVIWQKNPDTAHLTLAINVSALQFRNPDFVDDVARAIHESGALASRLKLEITESLLLED 915 Query: 990 ----AESVQKLR-LAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEM 1044 E +Q L+ G + L G + LK D + +D ++ N D Sbjct: 916 IDGTIERMQVLKNQLGVGLSLDDFGTGYSSLSYLKQLPLDQIKIDRSFVKDIHCNPNDAA 975 Query: 1045 LITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 + + + + IA V D L G G + P+D Sbjct: 976 IAEAVIALGRSFSLNVIAEGVETIEQRDALIARGCLTFQGYLFGRPGPIDAF 1027 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 41/286 (14%), Positives = 99/286 (34%), Gaps = 24/286 (8%) Query: 275 LILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQF 334 L++L + ++ + R + E + ++ G+ + GQ N + Sbjct: 330 LLILSMLAVAYLIRSKRLVGAALRER----ASLLDSLGEGVYGIDQNGQCTFINPKALEM 385 Query: 335 LGYSQEELRG--LTFQQLTWPED----LNKDLQQVEKLISGEINTYSMEKRYYNRNGDVV 388 LG++ +E+ G + D + D + L G+ E+ ++N++G Sbjct: 386 LGWTADEVIGSDQHARFHHHRPDGSIYPSADCPVYQTLRDGQRR--QGEEWFFNKDGRGF 443 Query: 389 WALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELK 448 +V+ + + + DI+E ++ +++ RI + + K Sbjct: 444 PVQYSVTPISRQEDK-EGAVVTFRDISEARKADELM-----RIAAIAFETQEAMLVTDAK 497 Query: 449 PNIFSWDKRMFELYEIPPHIKPNWQV--WYECVLPEDRQHAEKVIRDSLQSRSPFKLEFR 506 I ++ E+ + K + SL+ ++ E Sbjct: 498 SQILRVNRAFTEVTGYSAAEAIGQTPALLKSGYHEDS---FYKDLWTSLKENGLWRGEIW 554 Query: 507 ITVKDGIRHIRA-LANRVLNKEGEVERLLGINMDMTEVKQLNEALF 551 K+G + + V + GE+ + +D+T+ K+ E + Sbjct: 555 NRRKNGEIYPEWLTISAVRGQHGEITHFVSSFLDITKRKEAEEQIQ 600 Score = 139 bits (352), Expect = 5e-31, Method: Composition-based stats. Identities = 40/260 (15%), Positives = 89/260 (34%), Gaps = 10/260 (3%) Query: 284 TMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELR 343 V+ ++ + M + + Q L+ N+A + GYS E Sbjct: 460 GAVVTFRDISEARKADELMRIAAIAFETQEAMLVTDAKSQILRVNRAFTEVTGYSAAEAI 519 Query: 344 GLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGT 403 G T L + + + + E + E +NG++ L +S VR G Sbjct: 520 GQTPALLKSGYHEDSFYKDLWTSLK-ENGLWRGEIWNRRKNGEIYPEWLTISAVRGQHGE 578 Query: 404 PLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYE 463 +F++ DI + K E+ Q L L + + E + R Sbjct: 579 ITHFVSSFLDITKRKEAEEQIQFLALYDPLTHLPNRRLL--NERLSKALTSSGRQRRHAA 636 Query: 464 IPPHIKPNWQVWYECVLPEDRQHAEKV----IRDSLQSRSPFKLEFRITVKDGIRHIRAL 519 + N+++ + + + + +R+S++S R+ + + + L Sbjct: 637 LLFIDLDNFKMINDSMGHDIGDLLLRQVALRLRESVRSNDTVS---RLGGDEFVILLEEL 693 Query: 520 ANRVLNKEGEVERLLGINMD 539 + + + ++E + +D Sbjct: 694 SPNIHDATTQIEHIAQKMLD 713 Score = 97.1 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 46/219 (21%), Positives = 85/219 (38%), Gaps = 14/219 (6%) Query: 465 PPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVL 524 P H ++ P D E V+ + R+ D + + +V+ Sbjct: 271 PDHPVATKGKFHGFSPPADYSGLESVMLELRAHPD------RLEHFDAQDIVDKYSTQVV 324 Query: 525 NKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVA 584 G L+ + + + + + LDS+GE V ID + TF+NP A Sbjct: 325 --GGLSTLLILSMLAVAYLIRSKRLVGAALRERASLLDSLGEGVYGIDQNGQCTFINPKA 382 Query: 585 EKMSGWTQEEALGVPLLTVLHITFGDNGPLMEN----IYSADTSRSAIEQDVVLHCRSGG 640 +M GWT +E +G H +G + + +Y + + + G Sbjct: 383 LEMLGWTADEVIGSDQHARFH-HHRPDGSIYPSADCPVYQTLRDGQRRQGEEWFFNKDGR 441 Query: 641 SYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLS 679 + V YS+TP+S + G+V+ +D++E+RK + Sbjct: 442 GFPVQYSVTPISRQEDK-EGAVVTFRDISEARKADELMR 479 >UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=12 Tax=Bacteria RepID=A0L2H7_SHESA Length = 1228 Score = 861 bits (2226), Expect = 0.0, Method: Composition-based stats. Identities = 139/699 (19%), Positives = 276/699 (39%), Gaps = 19/699 (2%) Query: 408 IAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWEL-KPNIFSWDKRMFELYEIPP 466 +A ++I + + + +R + +G L + ++ E+ Sbjct: 535 MALSKEIARSQTFQATLMESEQRYRTLFDKAPVGHALKRLEDGQFVAINQAFMEITGYTL 594 Query: 467 HIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNK 526 W E + + + Q+R + KDG L ++ Sbjct: 595 EELQAIDPW-ELTPIRYQSSETEQLERLKQTRRYGPYQKHYRHKDGQLVAVRLNGSLVTA 653 Query: 527 EGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEK 586 + +L I D+TE ++ + L GE + +D I +N + Sbjct: 654 ANGEQLILFIVEDITEQERTVARVN----LLAQVFQQSGEGITIMDANDIIVDVNSAFTQ 709 Query: 587 MSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHY 646 ++G++++E +G + + + + +A + +V + G + Sbjct: 710 ITGYSRDEIIGKNCRFL--EAERTDRSIDAQVRAALEQTGFWQGEVWDRHKEGFDFPKWL 767 Query: 647 SITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQT 706 ++ + G+ + D++E + ++ + A HD+LT L NR S + +L + Q Sbjct: 768 MMSIVRDETGAISHYIGSFTDISERKVNEERIHFLAHHDSLTLLPNRLSLQSRLEKVFQE 827 Query: 707 VNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFG 766 + + A++FID+D FK +ND+ GH GD LL E+A + +++ + D++ARLGGDEF Sbjct: 828 AFISQTQIAVMFIDMDHFKNINDTLGHHVGDMLLLEVARRLKNIMGNDDIVARLGGDEFV 887 Query: 767 LLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQAD 826 ++L D + + +A + S +N ++ + + S GI+L + +M AD Sbjct: 888 VVLSDTDHDRVAKVAEALRSGLNQT-YLIDNKPLHSSPSIGISLFPTDGDSVEALMKNAD 946 Query: 827 IACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEA 886 +A Y +K GR + +ER + + + I N+L++ I Sbjct: 947 MAMYRAKAAGRNNYQFFTAAMNTLVTERQQIETGLR-QAIACNELLLYYQPQVD--ISSG 1003 Query: 887 RNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV--ASKGI 943 + + + +L W E ++ F + + + + V Q A+ +KG+ Sbjct: 1004 QVVGVEALIRWQHPELGLVAPDRFIPIAEEIDMIIPIGQWVLENALAQLAEWRDKGAKGL 1063 Query: 944 SISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLA 999 +++ LS L T+V D++ L L L L I + + E + +LR Sbjct: 1064 RMAVNLSAHQLRKDTIVADIINVLTKHKLGKGALELEITESVAMQYPEQNAKLLAELRQH 1123 Query: 1000 GCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMK 1059 G + + G + LK D L LD +++ + D + A LG+ Sbjct: 1124 GIELAIDDFGTGYSSLSYLKLLPLDRLKLDRSFVKDIESDPNDAAISAATISMAHELGLT 1183 Query: 1060 TIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 +A V + LSG+G DL+ G + D Sbjct: 1184 VVAEGVENEAQLVLLSGMGCDLVQGYYFSKPLAADDCFR 1222 Score = 153 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 61/316 (19%), Positives = 121/316 (38%), Gaps = 29/316 (9%) Query: 282 IMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGT-EGQWLQTNKALCQFLGYSQE 340 ++ + + + + ESE +R + + +G AL +GQ++ N+A + GY+ E Sbjct: 536 ALSKEIARSQTFQATLMESEQRYRTLFDKAPVGHALKRLEDGQFVAINQAFMEITGYTLE 595 Query: 341 ELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHT 400 EL+ + +LT + + +Q+E+ + +K Y +++G +V L SLV Sbjct: 596 ELQAIDPWELTPIRYQSSETEQLER-LKQTRRYGPYQKHYRHKDGQLVAVRLNGSLVTAA 654 Query: 401 DGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFE 460 +G L + +EDI E +RT + + G GI + I + + Sbjct: 655 NGEQL-ILFIVEDITEQERTVARV----NLLAQVFQQSGEGITIMDANDIIVDVNSAFTQ 709 Query: 461 LYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRA-L 519 + + DR + +R +L+ ++ E K+G + + Sbjct: 710 ITGYSRDEIIGKNCRFLEAERTDRS-IDAQVRAALEQTGFWQGEVWDRHKEGFDFPKWLM 768 Query: 520 ANRVLNKEGEVERLLGINMDMTEVKQLNEALF---------------QEKERLHITLD-- 562 + V ++ G + +G D++E K E + + RL Sbjct: 769 MSIVRDETGAISHYIGSFTDISERKVNEERIHFLAHHDSLTLLPNRLSLQSRLEKVFQEA 828 Query: 563 ---SIGEAVVCIDMAM 575 AV+ IDM Sbjct: 829 FISQTQIAVMFIDMDH 844 Score = 130 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 59/169 (34%), Gaps = 1/169 (0%) Query: 274 LLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQ 333 L+ + + + E++ + S G+ ++ + N A Q Sbjct: 650 LVTAANGEQLILFIVEDITEQERTVARVNLLAQVFQQSGEGITIMDANDIIVDVNSAFTQ 709 Query: 334 FLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLA 393 GYS++E+ G + L QV + + + E ++ G L Sbjct: 710 ITGYSRDEIIGKNCRFLEAERTDRSIDAQVRAALE-QTGFWQGEVWDRHKEGFDFPKWLM 768 Query: 394 VSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGI 442 +S+VR G ++I DI+E K E+ L +L + + Sbjct: 769 MSIVRDETGAISHYIGSFTDISERKVNEERIHFLAHHDSLTLLPNRLSL 817 Score = 115 bits (289), Expect = 1e-23, Method: Composition-based stats. Identities = 42/205 (20%), Positives = 80/205 (39%), Gaps = 9/205 (4%) Query: 11 ALPHPLLHLVSLGLVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRHAGRM-WPGIA 69 A H L + + L F+ L ++ A +W I + + W G+ Sbjct: 24 AFAHYLKVNILVALAYFVVGKIGLLIALPPGYSAAIWPAAGIAIASCIMWRQYAPWFGVL 83 Query: 70 LSCSLGNIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLP---WYNPLQNLADWLR 126 L L NI L L + + + ++A V A ++R++ P P + L Sbjct: 84 LGSWLININIGGAL-HLGWLPIAIASASSLQAYVSAKVIRRIDPVFTLDKPNTVIKSCLS 142 Query: 127 LALGSAIVPPLL--GGVLVVLLTPGDDPLRAFLIWVLSESIGALALVPLGLLFKPHYLL- 183 LAL + ++ L ++V P D L + + W + + +GA+ +PL +L + Sbjct: 143 LAL-TCMIATLFANAALVVHGTIPLKDALGSTVNWWIGDLLGAVIFIPLTMLIFDQRSIW 201 Query: 184 RHRNPRLLFESLLTLAITLTLSWLS 208 R R + L+ + + + S Sbjct: 202 RSRRVQTGLPLLVGFLFCVGIYYYS 226 >UniRef50_B8KF61 Ggef/eal/pas/pac-domain containing protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KF61_9GAMM Length = 810 Score = 860 bits (2224), Expect = 0.0, Method: Composition-based stats. Identities = 156/764 (20%), Positives = 288/764 (37%), Gaps = 38/764 (4%) Query: 337 YSQEELRGLTFQQLTWPEDLNKDLQQVEKLI-SGEINTYSMEKRYYNRNGDVVWALLAVS 395 S + + G ED+ + +LI E ++ R +G+ W Sbjct: 57 LSLDTILGQ-----VVNEDVAGFEAAMARLITEPEGKAQEVDFRADLDSGEQRWFRAIGR 111 Query: 396 LVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWD 455 +++ T + + D+ + + + + ++ +I + Sbjct: 112 SYANSEQTVTHAAGVLLDVTAQQSAQ-------QYYDTFFQQPNGMHLLASIEGDIKLAN 164 Query: 456 KRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRH 515 P + E V EDR K +++ + E R K+G Sbjct: 165 SAWELALGYTPEELIGKN-FLELVHEEDRAVTVKEMQNLSKGLKTLYFENRYRHKNGSYR 223 Query: 516 IRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAM 575 + A + +++ + + D+++ + LFQ + GE ++ D Sbjct: 224 VIAWSAAAADQDSII---CAVGRDISKENAAKQGLFQ----AAAVFKNSGEGILISDEKG 276 Query: 576 KITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLH 635 I +N +++G++++EA+G + + + + ++ A ++ Sbjct: 277 LIRDVNAAFSQITGYSRDEAIGQATSLLR--SGRHDAEFYKKMWHALKETGTWRGEIWNR 334 Query: 636 CRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRAS 695 +SG + +I+ + DG N G V + D+T+ ++ QL A +D LT L NR Sbjct: 335 RKSGAVFPELLTISKI---DGQNSGFVAIFTDITQLKETEEQLQKLAHYDPLTELPNRYL 391 Query: 696 FEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSD 755 ++L+ ++ +R A+ F+D+D FK +NDS GH AGD LL A+ + +LR D Sbjct: 392 INERLQQSIRRAQRRSERLAVFFLDIDSFKNINDSLGHLAGDKLLAMTANRLRELLRDDD 451 Query: 756 VLARLGGDEFGLLLPDCNVESARF-IATRIISAVNDYHFIWEGRVHRVGASAGITLIDDN 814 + R+GGDEF +LL D N IA +II A+ I EGR V AS GI++ D+ Sbjct: 452 TVGRIGGDEFLMLLEDINSPDVATNIAEKIIGALRK-PTILEGRSVSVSASVGISIYPDD 510 Query: 815 NHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMML 874 A +MS AD A Y++K GR Y A + + + N+ + Sbjct: 511 GQTAETLMSNADAAMYSAKEQGRNTFRFYSENLTRAAFQNVLIDSALR-EAKSRNEFRLA 569 Query: 875 AHGVASPRIPEARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQ 933 L L L W + F L + + V + Q Sbjct: 570 FQPQIDIVTNS--LLGLEVLLRWHHPTLGTVSPAQFIPQAERTGLIRDIGQWVLEQACLQ 627 Query: 934 AAKAV--ASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE 991 K + +++ +S + V+ + + LE + PP L L + ++ E Sbjct: 628 GNKWLAEGLPFGRLAVNVSAPQFRAEDFVDQVRQVLEYANFPPNRLELELTESVLVQDTE 687 Query: 992 S----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLIT 1047 + +LR G + + G + LK D L LD N+ + D ++ Sbjct: 688 QLIGNMDELRAMGIQFAIDDFGTGYSSLSYLKKMPIDRLKLDKSFVDNISTDDNDRIIAE 747 Query: 1048 IIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQ 1091 + Q +G++ IA + L IG G + Sbjct: 748 AVVALGQAMGLEVIAEGIEYEEQARALRDIGCTQFQGFLYGMPM 791 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 91/257 (35%), Gaps = 13/257 (5%) Query: 297 ISESETHFRNAMEYSAIGMALV-GTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPED 355 +S + + GM L+ EG N A LGY+ EEL G F +L ED Sbjct: 132 AQQSAQQYYDTFFQQPNGMHLLASIEGDIKLANSAWELALGYTPEELIGKNFLELVHEED 191 Query: 356 LNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDIN 415 +++++ L G Y E RY ++NG + + A DI+ Sbjct: 192 RAVTVKEMQNLSKGLKTLY-FENRYRHKNGSYRVIAWSAAAADQDS----IICAVGRDIS 246 Query: 416 ELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVW 475 + E +Q + + + G GI + K I + ++ Sbjct: 247 K----ENAAKQGLFQAAAVFKNSGEGILISDEKGLIRDVNAAFSQITGYSRDEAIGQATS 302 Query: 476 YECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLG 535 D + K + +L+ ++ E K G L ++ G+ + Sbjct: 303 LLRSGRHDAE-FYKKMWHALKETGTWRGEIWNRRKSGAVFPELLTISKID--GQNSGFVA 359 Query: 536 INMDMTEVKQLNEALFQ 552 I D+T++K+ E L + Sbjct: 360 IFTDITQLKETEEQLQK 376 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 44/225 (19%), Positives = 78/225 (34%), Gaps = 12/225 (5%) Query: 294 RKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWP 353 + + S G+ + +G N A Q GYS++E G L Sbjct: 248 ENAAKQGLFQAAAVFKNSGEGILISDEKGLIRDVNAAFSQITGYSRDEAIGQATSLLRSG 307 Query: 354 EDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIED 413 + +++ + E T+ E ++G V LL +S + DG F+A D Sbjct: 308 RHDAEFYKKMWHALK-ETGTWRGEIWNRRKSGAVFPELLTISKI---DGQNSGFVAIFTD 363 Query: 414 INELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFEL--YEIPPHIKPN 471 I +LK TE+ Q+L L I L+ +I +R L + + N Sbjct: 364 ITQLKETEEQLQKLAHYDPLTELPNRYLI-NERLQQSIRRAQRRSERLAVFFLDIDSFKN 422 Query: 472 WQVWYECVLPEDR-----QHAEKVIRDSLQSRSPFKLEFRITVKD 511 + + +++RD EF + ++D Sbjct: 423 INDSLGHLAGDKLLAMTANRLRELLRDDDTVGRIGGDEFLMLLED 467 Score = 93.6 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 81/248 (32%), Gaps = 19/248 (7%) Query: 432 TLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIK-PNWQVWYECVLPEDRQHAEKV 490 GI W WE F + ++ + V+ ED E Sbjct: 18 EAVFLEAGISTWRWEAHSGEFQLSDDGIRMLQVRDDELPLSLDTILGQVVNEDVAGFEAA 77 Query: 491 IRDSLQ--SRSPFKLEFRITVKDGI-RHIRALANRVLNKEGEVERLLGINMDMTEVKQLN 547 + + +++FR + G R RA+ N E V G+ +D+T Sbjct: 78 MARLITEPEGKAQEVDFRADLDSGEQRWFRAIGRSYANSEQTVTHAAGVLLDVTAQ---- 133 Query: 548 EALFQEKERLHITLDSIGEAV-VCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHI 606 Q ++ + T + + + I N E G+T EE +G L ++H Sbjct: 134 ----QSAQQYYDTFFQQPNGMHLLASIEGDIKLANSAWELALGYTPEELIGKNFLELVHE 189 Query: 607 TFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQ 666 D ++ + + + + ++G + +S S I +V + Sbjct: 190 --EDRAVTVKEMQNLSKGLKTLYFENRYRHKNGSYRVIAWSAAA--ADQDSIICAVG--R 243 Query: 667 DVTESRKM 674 D+++ Sbjct: 244 DISKENAA 251 >UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5U6_AZOSE Length = 740 Score = 860 bits (2222), Expect = 0.0, Method: Composition-based stats. Identities = 136/695 (19%), Positives = 258/695 (37%), Gaps = 23/695 (3%) Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQV 474 EL + + +R + + +G + I + L + Sbjct: 53 RELIEARRALEDARDRYSDLYDFAPVGYMTLDEHGVILEINLTGARLLGQDRAQVIGMPL 112 Query: 475 WYECVLPEDRQHAEKVIRDSLQSRSPFK---LEFRITVKDGIRHIRALANRVLNKEGEVE 531 Q + R + F L + + IRH+R + Sbjct: 113 SGWVPNGAVAQLFHHLRRVLSEPGRVFDHLPLHTSLVRESPIRHVRLESIAFTQYGSGRL 172 Query: 532 RLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWT 591 + D+++ K+ + L + + +A++ D +I +N ++G++ Sbjct: 173 CRTALV-DLSDRKREEDRLN----LIAQVFERSTDAIMITDSLNRIVSVNRAFTTVTGYS 227 Query: 592 QEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPL 651 +E LG + + + ++SA + ++ ++G Y+ +I + Sbjct: 228 ADEVLGRNPKLL--ASGRHDRDFYREMWSAIERNGSWSGEISNRRKNGEIYNEWLTIHAV 285 Query: 652 STLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTH 711 G + + ++T+ R ++ + A +D LT L NRA + ++ L Sbjct: 286 RNESGGIENCIAIYAEITDQRAAASRIQFLAHYDPLTLLPNRALLQDRMHQGLAHAAREG 345 Query: 712 QRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD 771 R A++F+DLDRFK +NDS GH GD LL+E+A + + +R D +AR GGDEF ++LP Sbjct: 346 TRAAVLFLDLDRFKTINDSLGHLVGDHLLQEVAQRLKASVREDDTVARRGGDEFIVMLPH 405 Query: 772 CN-VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACY 830 + E A +A +II A+ G V V S GI++ D+ ++ ADIA Y Sbjct: 406 VDSAEQAAHVAGKIIEAMEQT-IPVNGYVLNVSFSIGISVFPDDAMDPDTLIRNADIAMY 464 Query: 831 ASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLW 890 SK GR + + A ER A+ D R ++ + ++ + Sbjct: 465 RSKASGRNQFQFFTADMNAHALERLALENDL-HRAVERGEFRLMFQPQFE---GSGSIIG 520 Query: 891 LISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKG--ISISL 947 +L W + ++ F + L + V QQ + I++S+ Sbjct: 521 AEALLRWQHPQRGLVTPAEFIPVAEETGLIVPIGTWVLERACQQVRAWRDAGLKKITVSV 580 Query: 948 PLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH----AESVQKLRLAGCRI 1003 +S S L+ + L S + P L L + ++ + + +L+ G R+ Sbjct: 581 NISALQFSQKNLLELIRRLLAVSNIEPGTLELELTESVLMHDHVATSGLMSELKEMGVRM 640 Query: 1004 VLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAG 1063 + G + L++ L +D ++ + I G A+ L M+ IA Sbjct: 641 AIDDFGTGYSSLSYLRSFPISKLKIDQSFVRDLSDGGDAGAITGAIIGLAKNLNMRVIAE 700 Query: 1064 PVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 V L D G + + Sbjct: 701 GVETAQQASFLQAQCCDEFQGHFFSQPVSPEKFAE 735 Score = 130 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 31/281 (11%), Positives = 82/281 (29%), Gaps = 11/281 (3%) Query: 255 SLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIG 314 + +P ++ + + + E + E S Sbjct: 148 LVRESPIRHVRLESIAFTQYGSGRLCRTALVDLSDRKREEDRL----NLIAQVFERSTDA 203 Query: 315 MALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTY 374 + + + + + N+A GYS +E+ G + L +++ I ++ Sbjct: 204 IMITDSLNRIVSVNRAFTTVTGYSADEVLGRNPKLLASGRHDRDFYREMWSAIE-RNGSW 262 Query: 375 SMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLA 434 S E +NG++ L + VR+ G IA +I + + Q L L Sbjct: 263 SGEISNRRKNGEIYNEWLTIHAVRNESGGIENCIAIYAEITDQRAAASRIQFLAHYDPLT 322 Query: 435 NEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDS 494 + + + + + + ++ + + H + + Sbjct: 323 LLPNR-ALLQDRMHQGLAHAAREGTRA-AVLFLDLDRFKTINDSLGHLVGDHLLQEVAQR 380 Query: 495 LQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLG 535 L++ S + + + ++ + + G Sbjct: 381 LKA-SVREDDTVARRGGDEFIVML---PHVDSAEQAAHVAG 417 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 37/339 (10%), Positives = 104/339 (30%), Gaps = 34/339 (10%) Query: 276 ILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFL 335 + + + R+ + ++ + + +++ +G + G L+ N + L Sbjct: 41 LRVHQIELEAQNRELIEARRALEDARDRYSDLYDFAPVGYMTLDEHGVILEINLTGARLL 100 Query: 336 GYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYS---MEKRYYNRNGDVVWALL 392 G + ++ G+ + + + +++S + + + + L Sbjct: 101 GQDRAQVIGMPLSGWVPNGAVAQLFHHLRRVLSEPGRVFDHLPLHTSLVRES-PIRHVRL 159 Query: 393 -AVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNI 451 +++ ++ G D+++ KR E I E I + I Sbjct: 160 ESIAFTQYGSGRLCRTALV--DLSDRKREEDRL----NLIAQVFERSTDAIMITDSLNRI 213 Query: 452 FSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD 511 S ++ + DR + + +++ + E K+ Sbjct: 214 VSVNRAFTTVTGYSADEVLGRNPKLLASGRHDRD-FYREMWSAIERNGSWSGEISNRRKN 272 Query: 512 GIRHIRA-LANRVLNKEGEVERLLGINMDMTEVK--------------------QLNEAL 550 G + + V N+ G +E + I ++T+ + + Sbjct: 273 GEIYNEWLTIHAVRNESGGIENCIAIYAEITDQRAAASRIQFLAHYDPLTLLPNRALLQD 332 Query: 551 FQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSG 589 + H + AV+ +D+ + +N + G Sbjct: 333 RMHQGLAHAAREGTRAAVLFLDLD-RFKTINDSLGHLVG 370 >UniRef50_Q1N2J6 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1N2J6_9GAMM Length = 1407 Score = 860 bits (2222), Expect = 0.0, Method: Composition-based stats. Identities = 155/844 (18%), Positives = 316/844 (37%), Gaps = 39/844 (4%) Query: 280 ANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTN-KALCQFLGYS 338 A + + + + +SE + N ++ + + + + + + + + LGYS Sbjct: 565 AIVSFIDINDRIKAELALKDSEQFWSNVIQTLPDTVYVNDLFAKQTRFSSRHIGELLGYS 624 Query: 339 QEELRG-LTFQQLTWPEDLNKDLQQVEKLISGEINTY-SMEKRYYNRNGDVVWALLAVSL 396 EEL ++QL P+D++K + +L + R ++NG+ + Sbjct: 625 SEELEEIEHWRQLIHPDDVSKSDAAISQLKTMRPGEVKETTARLKHKNGNWRVIRFRDCI 684 Query: 397 VRHTDGTP-LYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWD 455 P Y++ DI E + + R L ++ K + Sbjct: 685 FSSETQVPAQYYVGMARDITEEEDAKIQLSFSERRYRLLANGISDIVFTLNKKLELSYIS 744 Query: 456 KRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSR---SPFKLEFR------ 506 + ++ + ++ E + + LQ S FK + R Sbjct: 745 ASINKMLGYDSDQVMR-EGLSLFLITESVNKLIQALERDLQLALSISSFKDQVRTMDLDA 803 Query: 507 ITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGE 566 T + ++ + N+ G +E +L D+T+ + + ++ E Sbjct: 804 QTFSGVPVILEMQSSILRNESGAIEGILATCRDVTQRRFIEHE----ARTASEVFENSSE 859 Query: 567 AVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRS 626 A++ I+ +N ++G+ + +GV + M++I A Sbjct: 860 AIMMTTSTGLISRVNRAFTHLTGFDGQHVIGVNPKQFIAKDVSH--QTMQDIRDALLVDG 917 Query: 627 AIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDA 686 + ++ R G + +T L G +++ D+T ++ ++ + A D Sbjct: 918 YWQGELDYINRKGEKHPSWTGVTALKDEMGQIQSHIIISSDITHRKQTEARIQHLAYFDP 977 Query: 687 LTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASL 746 LT L NRA + L L+ + AL+FIDLDRFK +ND+ GH AGD +L+E+AS Sbjct: 978 LTGLPNRAQMHEALDRLMAK---EESQLALLFIDLDRFKPINDTMGHPAGDQVLKEVASR 1034 Query: 747 MLSMLRSSDVLARLGGDEFGLLLPDCNV-ESARF----IATRIISAVNDYHFIWEGRVHR 801 + + + ++++R+GGDEF +++ E A ++ RI+ + F E R Sbjct: 1035 LKEAVGAKNLVSRIGGDEFTVIMATLPETEQAIQTIIDVSERILHQMMQ-PFFIEDRQLY 1093 Query: 802 VGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDE 861 + AS GI L +N +++ AD A Y +K G+ Y + ER + + Sbjct: 1094 LSASVGIALYPENALSGTDLLRNADTAMYHAKAMGKNNFQFYAEEMNEKAMERLELENNL 1153 Query: 862 QWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWS-CEGEIIDEQTFRRSFSDPALSH 920 ++ ++ + + + +L W + ++ F + L Sbjct: 1154 -HLALQRDEFELTFQAQWDIK--HNCICGVETLLRWHRPDIGLVGPDKFIPIIEETGLIV 1210 Query: 921 ALDRRVFHEFFQQAAKAVASKGI--SISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLH 978 + V +Q + + +++ LS A +++ + ++ + + P L+ Sbjct: 1211 PIGEWVLRRACEQIMDWQEAGYVIPKLAVNLSARQFKDAQMLDRICRIVDETGVDPELIE 1270 Query: 979 LIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCA 1034 L + ++D + + + R G + + G + LK L +D Sbjct: 1271 LELTESILMDDIDRTLAVLNEARKMGFGLSIDDFGTGYSSLSYLKQFPVSQLKIDKSFIQ 1330 Query: 1035 NVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLD 1094 N+ N D + I A LG+ IA V L IG + G + + P D Sbjct: 1331 NLPYNQEDGQITRTIVAMANNLGLGVIAEGVENESQRQFLKTIGCYQVQGYMYSHPVPAD 1390 Query: 1095 LLVN 1098 L Sbjct: 1391 LFAQ 1394 Score = 110 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 57/467 (12%), Positives = 144/467 (30%), Gaps = 54/467 (11%) Query: 262 TYLMSHMPWLPFL--LILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVG 319 + H+ ++ L L I+ V + + S A+ + Sbjct: 268 ALALPHIIFIAIYWMLAYLGFKILRYVKEKNQTDLDRFSAKANRAEEALSCIEEVVITTD 327 Query: 320 TEGQWLQTNKALCQFLGYSQ-EELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEK 378 G+ + N + LG + +++ G Q ++P D L++ + L+ ++ + Sbjct: 328 YRGRIIFCNPSAMTLLGLNDCQQVVGKPLVQ-SFPFDGLPWLEKDQNLLKNKLRIVNYGD 386 Query: 379 RYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAG 438 + +G + +SL R I + D++ + R + Sbjct: 387 TLVDVSGQLKTF--NISLYRPEKQNS--CIWVLRDVSRQAANRDLLNVSRARYQALYDGC 442 Query: 439 GIGIWEWEL-------------------------------KPNIFSWDKRMFELYEIPPH 467 G+G+W ++ N+ + ++ Sbjct: 443 GVGMWHVDISLVRSWLEQLDGVSVEDYLKQYPDSFADLRSSYNLIDINASAVSMHGGSNK 502 Query: 468 IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKE 527 + + L + + +++ Q F E G++ L N L++ Sbjct: 503 Q-KFIEALKDLFLSYNHELMQEMAEGIRQGAKSFSREVAFINAKGVK-NHYLVNATLDQV 560 Query: 528 GEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAE-K 586 G+ + ++ D+ + + AL ++ + ++ + V D+ K T + + Sbjct: 561 GQDQAIVSFI-DINDRIKAELALKDSEQFWSNVIQTLPDTVYVNDLFAKQTRFSSRHIGE 619 Query: 587 MSGWTQEEALG-VPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVH 645 + G++ EE ++H + E L ++G + Sbjct: 620 LLGYSSEELEEIEHWRQLIHPDDVSKSDAAISQLKTMRPGEVKETTARLKHKNGNWRVIR 679 Query: 646 YSITPLSTLDGSN--IGSVLVIQDVTESRKM-------LRQLSYSAS 683 + + + + V + +D+TE R+ A+ Sbjct: 680 FR-DCIFSSETQVPAQYYVGMARDITEEEDAKIQLSFSERRYRLLAN 725 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 45/330 (13%), Positives = 102/330 (30%), Gaps = 26/330 (7%) Query: 240 LTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISE 299 + T+ + + + P +L + L + + +L + R Sbjct: 796 VRTMDLDAQTFSGVPVILEMQSSILRNESGAIEGILATC------RDVTQRRFIEHEART 849 Query: 300 SETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKD 359 + E S+ + + + G + N+A G+ + + G+ +Q + ++ Sbjct: 850 ASE----VFENSSEAIMMTTSTGLISRVNRAFTHLTGFDGQHVIGVNPKQFIAKDVSHQT 905 Query: 360 LQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKR 419 +Q + + + + E Y NR G+ + V+ ++ G I DI K+ Sbjct: 906 MQDIRDALLVD-GYWQGELDYINRKGEKHPSWTGVTALKDEMGQIQSHIIISSDITHRKQ 964 Query: 420 TEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECV 479 TE Q L L + E + + + ++ + + Sbjct: 965 TEARIQHLAYFDPLTGLPNRAQMHE---ALDRLMAKEESQ--LALLFIDLDRFKPINDTM 1019 Query: 480 -LPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINM 538 P Q ++V ++ L RI + + L E E+ + + Sbjct: 1020 GHPAGDQVLKEVASRLKEAVGAKNLVSRIGGDEFTVIMATLP--------ETEQAIQTII 1071 Query: 539 DMTEVKQLNEALFQEKERLHITLDSIGEAV 568 D++E E S + Sbjct: 1072 DVSERILHQMMQPFFIED-RQLYLSASVGI 1100 >UniRef50_Q31NI4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Synechococcus elongatus RepID=Q31NI4_SYNE7 Length = 929 Score = 860 bits (2222), Expect = 0.0, Method: Composition-based stats. Identities = 193/864 (22%), Positives = 333/864 (38%), Gaps = 45/864 (5%) Query: 246 VSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFR 305 + L+ L L + + L ++ESE+ +R Sbjct: 85 IILLTGQGNEQLDASAIELGAADYLVKGQLDCQQLLRSIRYAIDRNLATTRLAESESRYR 144 Query: 306 NAMEYSAIGMALVGTEG-QWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVE 364 E + M + +G Q+L N+A QF GYSQ+E +T + E+ + LQ E Sbjct: 145 LLFEANPEPMWVFAKQGLQFLAVNQAASQFFGYSQQEFLAMTVLDIQSEEEKTRFLQFFE 204 Query: 365 KLISGEINTYSMEKR-YYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQV 423 LI +I ++ Y ++ G +V+A + + + +A DI E + ++ Sbjct: 205 SLICNQIVDPAVGVWAYRHKQGHLVFADVLIHDFEFDNQPCCLILAI--DITEKQAAREL 262 Query: 424 NQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPED 483 Q + + I + +L ++ + + D Sbjct: 263 AHQREQAFRKLLNDNRDPLLVISGDRRICYANPAAQKLLKLNLEQLESQSL--------D 314 Query: 484 RQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEV 543 + E+ +T+ DG + + EG+ LL + D+ E Sbjct: 315 LPLLSDKLT-----------EWALTLPDGSVAEVEIHRSETDWEGQPADLLSL-RDIAER 362 Query: 544 KQLNEALFQEKERLHITLDSIGEAVVCIDM---AMKITFMNPVAEKMSGWTQEEALGVPL 600 K + L L +L++ VV +D M + ++NP E+++G+++ E LG Sbjct: 363 KASEQQL----RLLKESLEASFNGVVIVDAIEPDMPVIYVNPAFERITGYSEAEMLGRNC 418 Query: 601 LTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIG 660 + + +E I+ + + + + G + I+P+ G+ Sbjct: 419 RILQG--NERDSLQIEEIHRGLSQAENVHVVIRNFRKDGQPFWNDLYISPIFNAQGNVTH 476 Query: 661 SVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFID 720 + V D+TE ++ +LS+SASHD LT L NRA E +LR + A++FID Sbjct: 477 FIGVQNDITEQKRYEEELSFSASHDVLTGLPNRAVLEDRLRQGCKMALRQKHSLAILFID 536 Query: 721 LDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE-SARF 779 LD FK +NDS GH +GD LL E+A M +R+ D +AR+GGDEF +LL D +E Sbjct: 537 LDGFKLINDSIGHRSGDLLLVEVAQRMCEQVRAGDTVARIGGDEFIILLVDLKLENDVIS 596 Query: 780 IATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGR 839 IA R++++V + +G V AS GITL D + Q +++ QAD+A Y +K GR Sbjct: 597 IADRLLASVAR-PYHIQGIYLHVTASMGITLSDGDIEQPTQLIQQADLAMYKAKQEGRNN 655 Query: 840 VTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-S 898 Y ER + +E + I+ + + + L +L W Sbjct: 656 YQWYTNDLNLRLRERVHL-RNELQKAIETEAFELYFQPKI--EGCSGQVIGLEALLRWQH 712 Query: 899 CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK--GISISLPLSVAGLSS 956 + I TF D L + V +Q + S+++ +S Sbjct: 713 PQMGFISPATFVPIAEDTGQIIPLSQWVLETACRQLRDLLQQGIAAPSVAVNISTVQFRR 772 Query: 957 ATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH----AESVQKLRLAGCRIVLSQVGRDL 1012 V + L+ L L + I + D+ E +Q+L+ G I + G Sbjct: 773 INFVKSVQSALQKYQLKSEHLEIEITENVLFDNTEKAIEKLQRLKELGVNISIDDFGTGF 832 Query: 1013 QIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMD 1072 + LK D + +D + + D + I A L + +A V Sbjct: 833 SSLSYLKELPIDTVKIDRSFVQEINTDSRDAAITQGIISMAHHLRLNVVAEGVETEQQFK 892 Query: 1073 TLSGIGVDLIYGEVIADAQPLDLL 1096 L D G A P + L Sbjct: 893 FLQQSNCDQYQGYYFAKPMPFEAL 916 >UniRef50_C7CCD7 Putative diguanylate cyclase (GGDEF) /phosphodiesterase (EAL), with GAF and two PAS/PAC sensor domains n=1 Tax=Methylobacterium extorquens DM4 RepID=C7CCD7_METED Length = 1028 Score = 859 bits (2220), Expect = 0.0, Method: Composition-based stats. Identities = 194/920 (21%), Positives = 365/920 (39%), Gaps = 52/920 (5%) Query: 218 FIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLIL 277 F I L+ + + + L + + V + D + ++ Sbjct: 100 FAINPLVVGDLAVRFYAGAPLILRSGIRVGTICIFDTKPCSFSEMQRTQLQDLARIVVAH 159 Query: 278 LPANIMTMVMYAFRAERKHISE----SETHFRNAMEYSAIGMAL-VGTEGQWLQTNKALC 332 + + + + A AER +E +R + + + +G + TN+ Sbjct: 160 IELHQGRLTIEAALAERTRSEALIAANEARYRALADALPQMVWVMTSADGSAIYTNERFR 219 Query: 333 QFLGY---SQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVW 389 + G +EE P D + ++ ++ ++ E +TY++E R +G W Sbjct: 220 TYYGSIGPQREERTSRN-----HPADTERMAEEWQRAVTHE-HTYAVEGRLRRHDGTYRW 273 Query: 390 ALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKP 449 L + VR +GT + ++ DI ++ + + + LA EA G G+W+ +L Sbjct: 274 HKLVMVPVR-QNGTVVEWLGTALDIEDIVTARSTLEHTTDLLRLAQEAAGAGVWQRDLDD 332 Query: 450 NIFSWDKRMFELYEIPPH------IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKL 503 ++ ++ I + W V P+D + +L++ + +K+ Sbjct: 333 DVVRHSPMSARMHGFLGEPDLSGWIAVSIAEWAARVHPDDLAQVRAMHAGALRNGTTYKV 392 Query: 504 EFRIT---VKDGIRHIRALANRVLNK-EGEVERLLGINMDMTEVKQLNEALFQE------ 553 EFR+ D R + + ++ G R++G+N+D+T+ + +AL Q Sbjct: 393 EFRVRQSADMDDYRWLMGFGRVIRDETSGRPLRVVGLNLDITDRRTTEDALAQSQTHLRA 452 Query: 554 -KERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGV--PLLTVLHITFGD 610 +ERL + LDS + + ++ + + + M G+ E ++H Sbjct: 453 SEERLALALDSGNDGLFDWNVTTGKVWYSDRWQTMLGYKPGEIEPHILSWERLVHPDDLH 512 Query: 611 NGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPL-STLDGSNIGSVLVIQDVT 669 + + + S + + L +SG V + G+ + V D+T Sbjct: 513 QARTLLTEHFGELS-ATYSSEHRLRSKSGEYTWVLGRGRVVARDEQGAPLRMVGTSIDIT 571 Query: 670 ESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVND 729 E + ++++Y A HD LT L NR F + L L V + AL+ +DLDRFK++ND Sbjct: 572 ERKASEQRIAYMARHDVLTGLPNRTVFHEHLEQRLAEVRRGRGQAALLCLDLDRFKSIND 631 Query: 730 SAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN-VESARFIATRIISAV 788 GH AGD LL ++A+ + + +R DV+ RLGGDEF +++ + A +A R+I AV Sbjct: 632 MLGHPAGDELLCQIATRLRATVRGGDVVVRLGGDEFAIIVSHLDHARQASVLAQRVIDAV 691 Query: 789 NDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQA 848 G + VG S GI N + + AD+A Y +K R YE Sbjct: 692 GQ-PLDLGGHLVTVGISIGIAFAPTNGDTSETLFKNADLALYRAKASARNTYCFYEAGMD 750 Query: 849 AAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQ 907 AA R + + + I + V R+ + R + +L W + +I Sbjct: 751 AAVEARMQLEFEMR-EAITCGSFALHYQPV--LRLADHRIVGFEALMRWPHPKRGMIAPD 807 Query: 908 TFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLVNDLLEQL 967 F S + L L E ++AA + I++ +S L ++ L Sbjct: 808 EFIPSAEETGLIVPLGSWALQEACREAASWPD--HLRIAVNVSAVQFQQPGLEQGVMSAL 865 Query: 968 ENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMA 1023 S L P L L + ++ AE+ + +L+ G RI L G + L+ Sbjct: 866 AASGLAPHRLVLEVTESVLVQDAEAVIACLHRLKSLGVRIALDDFGTGYSSLSYLRRFPF 925 Query: 1024 DYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIY 1083 D + +D + + + ++ + G A +LG A V ++ + G + Sbjct: 926 DRIKIDRSFISEIG-DPGAAAIVRAVVGIAMQLGATVTAEGVETTAQLEQVRSEGCMEVQ 984 Query: 1084 GEVIADAQPLD---LLVNSS 1100 G +++ P D ++SS Sbjct: 985 GYLVSRPLPADRAIEFISSS 1004 >UniRef50_C7LTY3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LTY3_DESBD Length = 1075 Score = 858 bits (2218), Expect = 0.0, Method: Composition-based stats. Identities = 164/691 (23%), Positives = 288/691 (41%), Gaps = 20/691 (2%) Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFS-WDKRMFELYEIPPHIKPNWQ 473 +++ E +G+ ++E F +++ +L Sbjct: 381 RQVQERTAALSASERSFRAFFEMASVGVAQFEGDTRRFIKVNRKFSDLMGYSAAELGTLS 440 Query: 474 VWYECVLPEDRQHAEKVIRDSLQSRS-PFKLEFRITVKDGIRHIRALANRVLNKEGE-VE 531 + V P+D Q +E+ ++ + LE R K G L +GE E Sbjct: 441 P-RDLVHPDDWQASEEAMKSLVTKEQKEITLEKRYVRKGGGVFWGLATISPLWDQGEHPE 499 Query: 532 RLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWT 591 L + D+T K+ E L ++ E +V + I +NP ++G++ Sbjct: 500 SYLAVVRDITVAKKAEEKLL----LAAKVFENTVEGIVVTNTEGTIEQVNPGFTVITGYS 555 Query: 592 QEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPL 651 +EA+G + + + +++ T ++ + G SY +I+ + Sbjct: 556 ADEAVGSNPRILK--SDRHAQHFYQEMWTKLTQDGHWAGEIWNRRKDGESYPEWLTISAV 613 Query: 652 STLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTH 711 G V + D+TE ++ L Y A HDALT + NR +LR+ L + + Sbjct: 614 KNEAGQTTNYVSIFHDITELKRQQDALEYQAQHDALTGMPNRILLGDRLRMALAQLARSG 673 Query: 712 QRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD 771 + AL+F DLD FK +ND GH GD LL +L+ + +LRS D LARLGGDEF +LLP+ Sbjct: 674 GKLALLFFDLDNFKTINDGLGHGVGDELLVDLSRRLERLLRSGDTLARLGGDEFLILLPE 733 Query: 772 C-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACY 830 +V++A IATR++ A+ F + V AS G+T+ D+ ++A +++ AD+A Y Sbjct: 734 IESVDAASHIATRMLDAL-KAPFHHGDVEYFVTASIGLTIAPDDGNEAPKLIKNADMAMY 792 Query: 831 ASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLW 890 +K+ GR + P+ A R +M + + I+ + + + I L Sbjct: 793 RAKSMGRNNYQYFTPEMDVAAHRRISMEYKLR-KAIEAQEFELFYQPLV--HIQSGHILG 849 Query: 891 LISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK-GISISLPL 949 +L W CEG++I F + AL L V QA + +++S+ + Sbjct: 850 AEALIRWRCEGKLISPAEFIPLAEESALILPLGDWVLRTAAHQAKLWQDAGHDLTMSVNI 909 Query: 950 SVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVL 1005 S S A L L E L ++ L P L+ I ++ ++ LR AG L Sbjct: 910 SSRQFSGADLAVTLREVLLDTELRPGRLYFEITESMLMGDVSKAETTLLNLREAGGTFFL 969 Query: 1006 SQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPV 1065 G + LK D L +D ++ + ++ I A+ L ++ +A V Sbjct: 970 DDFGTGYSSLSYLKRLPIDGLKIDRSFIKDITDDSDSRAIVAAIVSMARTLNLRIVAEGV 1029 Query: 1066 VLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 L+ +G ++ G + + P Sbjct: 1030 ETQAQRGLLASMGPIVLQGYLASRPVPAQDF 1060 Score = 170 bits (432), Expect = 3e-40, Method: Composition-based stats. Identities = 57/296 (19%), Positives = 112/296 (37%), Gaps = 7/296 (2%) Query: 262 TYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTE 321 + ++ + + T + + +S SE FR E +++G+A + Sbjct: 355 LIALGVFLFVGTGITAMLFFFNTRLSRQVQERTAALSASERSFRAFFEMASVGVAQFEGD 414 Query: 322 -GQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRY 380 ++++ N+ +GYS EL L+ + L P+D + ++ L++ E ++EKRY Sbjct: 415 TRRFIKVNRKFSDLMGYSAAELGTLSPRDLVHPDDWQASEEAMKSLVTKEQKEITLEKRY 474 Query: 381 YNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGI 440 + G V W L +S + P ++A + DI K+ E+ + E Sbjct: 475 VRKGGGVFWGLATISPLWDQGEHPESYLAVVRDITVAKKAEEKLLLAAK----VFENTVE 530 Query: 441 GIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSP 500 GI + I + + QH + + L Sbjct: 531 GIVVTNTEGTIEQVNPGFTVITGYSADEAVGSNPRILKSDRH-AQHFYQEMWTKLTQDGH 589 Query: 501 FKLEFRITVKDGIRHIRA-LANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKE 555 + E KDG + + V N+ G+ + I D+TE+K+ +AL + + Sbjct: 590 WAGEIWNRRKDGESYPEWLTISAVKNEAGQTTNYVSIFHDITELKRQQDALEYQAQ 645 Score = 142 bits (359), Expect = 7e-32, Method: Composition-based stats. Identities = 30/199 (15%), Positives = 66/199 (33%), Gaps = 7/199 (3%) Query: 281 NIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQE 340 + + + + + E + G+ + TEG Q N GYS + Sbjct: 502 LAVVRDITVAKKAEEKL----LLAAKVFENTVEGIVVTNTEGTIEQVNPGFTVITGYSAD 557 Query: 341 ELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHT 400 E G + L Q++ ++ + ++ E ++G+ L +S V++ Sbjct: 558 EAVGSNPRILKSDRHAQHFYQEMWTKLT-QDGHWAGEIWNRRKDGESYPEWLTISAVKNE 616 Query: 401 DGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFE 460 G +++ DI ELKR + + + L I + + R Sbjct: 617 AGQTTNYVSIFHDITELKRQQDALEYQAQHDALT--GMPNRILLGDRLRMALAQLARSGG 674 Query: 461 LYEIPPHIKPNWQVWYECV 479 + N++ + + Sbjct: 675 KLALLFFDLDNFKTINDGL 693 >UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Psychromonas ingrahamii 37 RepID=A1SZA9_PSYIN Length = 777 Score = 858 bits (2218), Expect = 0.0, Method: Composition-based stats. Identities = 147/726 (20%), Positives = 271/726 (37%), Gaps = 59/726 (8%) Query: 416 ELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVW 475 ELK+ ++L R T E IG + + LK I + R L +I + + Sbjct: 59 ELKQARIA-EKLHYRYTELFEFAPIGYFSFNLKGVINQVNLRGASLLDIERANLVG-KQF 116 Query: 476 YECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLG 535 C+ +DR + + + E V + AN + + + ++ Sbjct: 117 SNCLTAQDRNKFNRCLAKAFAGDGIQSFEVLAQVGKHKCWLNIEANLGITETDCLAAVI- 175 Query: 536 INMDMTEVKQLNEAL-------------------------------FQEKERLHITLDSI 564 D+T+ K+ +E L E + Sbjct: 176 ---DITDRKRADEELLFQNDEKGKRTDELVIANKELFFQNAEKEKRVGELRVAATVFE-T 231 Query: 565 GEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTS 624 E + D + I +N +SG++ EE +G + + + ++++ + Sbjct: 232 QEGMFVTDANLCILRVNKAFTNISGYSGEEVIGQSPKLF--NSGRQDKAFYKEMWNSINT 289 Query: 625 RSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASH 684 A +V +SG Y + +IT + G V +D+T S+ +++ A Sbjct: 290 TDAWRGEVSNRSKSGDIYAKNLTITAVRDGKGVVSNYVATFRDITTSKAASEKINNLAYF 349 Query: 685 DALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELA 744 D LT L NR LR +L ++Q AL+F+DLD FK +ND+ GH GD LL+++A Sbjct: 350 DPLTQLPNRRMLLDSLRHVLTISARSNQHCALLFLDLDNFKTLNDTLGHDVGDLLLQQVA 409 Query: 745 SLMLSMLRSSDVLARLGGDEFGLLLPDCNVESAR------FIATRIISAVNDYHFIWEGR 798 + + +R D++ARLGGDEF +LL + ++++ +A +II + ++ Sbjct: 410 TRLTDCVREGDIVARLGGDEFVVLLENLSLQAIEAANKAKKVAKKIIFELAQ-YYQLNMH 468 Query: 799 VHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMS 858 + S G+T+ N E++ QADIA Y SK GR + + RA M Sbjct: 469 RYHSTTSIGVTIFSGNETGIEELLKQADIAMYQSKAAGRNTWHFFNKTMQESIIARADME 528 Query: 859 LDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPA 917 D + + I++NQ + S + L +L W E + F + Sbjct: 529 RDLR-KAIEDNQFQLHYQAQVS---SSGQTLGAEALIRWQHPERGQVSPFNFIPLAEETG 584 Query: 918 LSHALDRRVFHEFFQQAAKAVASK---GISISLPLSVAGLSSATLVNDLLEQLENSPLPP 974 L + + V Q + + +++ +S L V + L+ + P Sbjct: 585 LILPIGQWVLDSACAQLKAWQKNPLTQDLVLAVNISAKQLHQEDFVEQVKATLKRHDINP 644 Query: 975 RLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDG 1030 L L + ++++ + L G L G LK + + +D Sbjct: 645 ARLKLELTESMLVENISDIITKMNILSKIGISFSLDDFGTGYSSLQYLKKLPLNQIKIDQ 704 Query: 1031 ELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADA 1090 ++ + D ++ I + L + IA V L G G + + Sbjct: 705 SFVRDLITDASDRAIVRTIITMSHSLDISVIAEGVETVEERQYLLDNGCTHYQGYLFSKP 764 Query: 1091 QPLDLL 1096 P++ Sbjct: 765 VPINEF 770 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 75/231 (32%), Gaps = 4/231 (1%) Query: 291 RAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQL 350 + K E + + GM + L+ NKA GYS EE+ G + + Sbjct: 211 QNAEKEKRVGELRVAATVFETQEGMFVTDANLCILRVNKAFTNISGYSGEEVIGQSPKLF 270 Query: 351 TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQ 410 +++ I + + E +++GD+ L ++ VR G ++A Sbjct: 271 NSGRQDKAFYKEMWNSI-NTTDAWRGEVSNRSKSGDIYAKNLTITAVRDGKGVVSNYVAT 329 Query: 411 IEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKP 470 DI K + L L + + ++ + R + + Sbjct: 330 FRDITTSKAASEKINNLAYFDPLTQLPNRRML--LDSLRHVLTISARSNQHCALLFLDLD 387 Query: 471 NWQVWYECVLPEDRQHAEKVIRDSLQSR-SPFKLEFRITVKDGIRHIRALA 520 N++ + + + + + L + R+ + + + L+ Sbjct: 388 NFKTLNDTLGHDVGDLLLQQVATRLTDCVREGDIVARLGGDEFVVLLENLS 438 Score = 85.5 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 91/303 (30%), Gaps = 45/303 (14%) Query: 283 MTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEEL 342 + M + R + + E++ IG +G Q N L + L Sbjct: 53 LEMQNEELKQARIA-EKLHYRYTELFEFAPIGYFSFNLKGVINQVNLRGASLLDIERANL 111 Query: 343 RGLTFQQLTWPEDLNKDLQQVEKLISGEI-NTYSMEKRY-YNRNGDVVWALLAVSL-VRH 399 G F +D NK + + K +G+ ++ + + ++ W + +L + Sbjct: 112 VGKQFSNCLTAQDRNKFNRCLAKAFAGDGIQSFEVLAQVGKHK----CWLNIEANLGITE 167 Query: 400 TDGTPLYFIAQIEDINELKRTEQVNQQL------------------------------ME 429 TD +A + DI + KR ++ Sbjct: 168 TD-----CLAAVIDITDRKRADEELLFQNDEKGKRTDELVIANKELFFQNAEKEKRVGEL 222 Query: 430 RITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEK 489 R+ G++ + I +K + +D + K Sbjct: 223 RVAATVFETQEGMFVTDANLCILRVNKAFTNISGYSGEEVIGQSPKLFNSGRQD-KAFYK 281 Query: 490 VIRDSLQSRSPFKLEFRITVKDGIRHI-RALANRVLNKEGEVERLLGINMDMTEVKQLNE 548 + +S+ + ++ E K G + V + +G V + D+T K +E Sbjct: 282 EMWNSINTTDAWRGEVSNRSKSGDIYAKNLTITAVRDGKGVVSNYVATFRDITTSKAASE 341 Query: 549 ALF 551 + Sbjct: 342 KIN 344 >UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria RepID=Q1NRJ4_9DELT Length = 1052 Score = 858 bits (2218), Expect = 0.0, Method: Composition-based stats. Identities = 159/884 (17%), Positives = 309/884 (34%), Gaps = 87/884 (9%) Query: 282 IMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTN-KALCQFLGYSQE 340 + A + + + R + +GMAL + + L+ N + CQ L + Sbjct: 191 GTAQDVTAQKQAEEELQ---NRLRLLALNAEMGMALT--QDRSLEANLQTCCQALVNHLD 245 Query: 341 ELRGLTFQQLTWPEDLNKDLQQ---VEKLISGEINTYSME----------KRYYNRNGDV 387 + L + L +E + GE + ++ R + + Sbjct: 246 AALARIW--LIPDHESVLLLAASAGLETRLDGEFSRVPIDPRTKIGDIALHRQPRVSNQL 303 Query: 388 V-------WALLAVSLVRHTDGTP-------LYFIAQIEDIN------------------ 415 + + + ++ G P + +A Sbjct: 304 LNDPQIRNPEWVKANGLQGMAGQPLEVAGKVVGVLALFTRYRLPASISDSLASLADLIAL 363 Query: 416 --ELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQ 473 E K+ E + I + I +W++ L+ + + Sbjct: 364 GLERKQNENRLLTQAR----IVDQIRDAIITTDPAGLIMTWNQGAQRLFGYTAQE-ASHR 418 Query: 474 VWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEG---EV 530 + P + + + L+ R +++E + K G R + + EG Sbjct: 419 PLSFLLAPHELDFYQGQVLPQLRERLSYQIEIEVQTKHGDRRFADFSLTQFSPEGGGSTR 478 Query: 531 ERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGW 590 ++ D+TE ++ E + L + EAVV D +I +N EK++G+ Sbjct: 479 GGIICYARDITERQKREERMRLSSRFL----EDTNEAVVITDADARIIEVNRAFEKLTGY 534 Query: 591 TQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITP 650 +++EA+G + + + ++ + E ++ ++ + SI+ Sbjct: 535 SRQEAIGQNPRILQ--SGHYDADFYREMWDTLLTTGHWEGELWSRRKNNELHPKWLSISA 592 Query: 651 LSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNST 710 + G V + D+T +++ +L +D LT L N F +L+ + Sbjct: 593 VYDQRGRITHYVGISNDLTATKQTQEKLEELTHYDQLTSLPNILLFRDRLQQAMARARRE 652 Query: 711 HQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLP 770 + AL+ DLDRFK VNDS GH+ GD +L E+A + L +D + R GGDEF LLL Sbjct: 653 EHKVALLIFDLDRFKEVNDSLGHSVGDLVLTEVAQRLRQQLSLADTICRPGGDEFYLLLG 712 Query: 771 DC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIAC 829 ++++A A ++ + F + S GITL D+ + ++ + A Sbjct: 713 RLTDIDTAVQAAQNVLELFSK-PFQAADHQLYLTPSIGITLFPDDGEEVESLIQSVETAM 771 Query: 830 YASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEAR-N 888 Y +K G ++ A R M + R ++ + + + R Sbjct: 772 YHAKKDGGNSFQFFQETMFTAALGRMTM-KNRLRRAVELEEFELYYQPKI---AADGRTV 827 Query: 889 LWLISLKLW-SCEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQ--AAKAVASKGIS 944 + +L W E + F + L + V + +Q + + Sbjct: 828 VGAEALIRWVQPERGGPVSPAEFIPLAEETGLIIPIGEWVLRQACRQSLLWQQAGLPPLR 887 Query: 945 ISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQK----LRLAG 1000 I++ LS L +++ L+ LP LL L I +++ + L+ G Sbjct: 888 IAVNLSAVQFKQPGLDDEINWILQEIGLPAELLELEITESLLMEDVTTANATLWKLKDMG 947 Query: 1001 CRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKT 1060 + L G + LK D L +D E ++ + D +I I A L M+ Sbjct: 948 IHLALDDFGTGYSSLSYLKNFPLDTLKIDREFVRDLSTDDEDRAVIITIITLAHSLKMEV 1007 Query: 1061 IAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPL---DLLVNSSY 1101 +A V + L G D+ G + P + + S Sbjct: 1008 VAEGVEDADQVAFLRQRGCDVFQGYHFSRPLPAKEFEQFLRSQN 1051 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 81/506 (16%), Positives = 168/506 (33%), Gaps = 68/506 (13%) Query: 228 VRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLIL-LPANIMTMV 286 R L F+ ++ ++ A L T ++ + L L+ L ++ Sbjct: 8 FREYSWPWLLGFVLLQVLGVAVLVAVQDLSPTEPANRITLLWLLAAALVTNLIFWLILHQ 67 Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRG-- 344 + + R ++ + S + R A + + +G + Q L + L + G E Sbjct: 68 IQSHRRVQQELMVSSSQLRKAQQIAKMGHWEWKHDDQPLHWSAELYRIFGQDPESYTPDY 127 Query: 345 LTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTP 404 F +D + + V E Y + R NG L+R G P Sbjct: 128 QAFLATIPEDDRRQVQEAV-AHTQREGVPYDITHRIRLPNGREKIIHERGELIRDEQGRP 186 Query: 405 LYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWE-----------LKPNIFS 453 + + +D+ K+ E+ Q R+ L +G+ + + + Sbjct: 187 VKMMGTAQDVTAQKQAEEELQ---NRLRLLALNAEMGMALTQDRSLEANLQTCCQALVNH 243 Query: 454 WDKRMFELYEIPPHI-------------KPNWQVWYECVLPE----DRQHAEKVIRDSLQ 496 D + ++ IP H + + + + P D + + Sbjct: 244 LDAALARIWLIPDHESVLLLAASAGLETRLDGEFSRVPIDPRTKIGDIALHRQPRVSNQL 303 Query: 497 SRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMD------MT--------- 541 P +G ++ +A + L G+V +L + ++ Sbjct: 304 LNDPQIRNPEWVKANG---LQGMAGQPLEVAGKVVGVLALFTRYRLPASISDSLASLADL 360 Query: 542 -----EVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEAL 596 E KQ L + +D I +A++ D A I N A+++ G+T +EA Sbjct: 361 IALGLERKQNENRLLTQ----ARIVDQIRDAIITTDPAGLIMTWNQGAQRLFGYTAQEAS 416 Query: 597 GVPLLTVLHITFGDNGPLME-NIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLD 655 PL +L + + R + + ++ + + G +S+T S Sbjct: 417 HRPLSFLLAP---HELDFYQGQVLPQLRERLSYQIEIEVQTKHGDRRFADFSLTQFSPEG 473 Query: 656 GSNI--GSVLVIQDVTESRKMLRQLS 679 G + G + +D+TE +K ++ Sbjct: 474 GGSTRGGIICYARDITERQKREERMR 499 Score = 143 bits (361), Expect = 5e-32, Method: Composition-based stats. Identities = 56/370 (15%), Positives = 120/370 (32%), Gaps = 34/370 (9%) Query: 250 MAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAME 309 MA P +A +++ + + + A ERK ++ Sbjct: 323 MAGQPLEVAGKVVGVLALFTRYRLPASISDSLASLADLIALGLERKQNENRLLTQARIVD 382 Query: 310 YSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISG 369 + G + N+ + GY+ +E L P +L+ QV + Sbjct: 383 QIRDAIITTDPAGLIMTWNQGAQRLFGYTAQEASHRPLSFLLAPHELDFYQGQVLPQLR- 441 Query: 370 EINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPL--YFIAQIEDINELKRTEQVNQQL 427 E +Y +E ++GD +A +++ G I DI E ++ E+ + Sbjct: 442 ERLSYQIEIEVQTKHGDRRFADFSLTQFSPEGGGSTRGGIICYARDITERQKREERMRLS 501 Query: 428 MERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHA 487 + E + + I ++ +L D Sbjct: 502 SRFL----EDTNEAVVITDADARIIEVNRAFEKLTGYSRQEAIGQNPRILQSGHYDAD-F 556 Query: 488 EKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA-NRVLNKEGEVERLLGINMDMTEVKQL 546 + + D+L + ++ E K+ H + L+ + V ++ G + +GI+ D+T KQ Sbjct: 557 YREMWDTLLTTGHWEGELWSRRKNNELHPKWLSISAVYDQRGRITHYVGISNDLTATKQT 616 Query: 547 NEALFQE---------------KERLHITLDSIG-----EAVVCIDMAMKITFMNPVAEK 586 E L + ++RL + A++ D+ + +N Sbjct: 617 QEKLEELTHYDQLTSLPNILLFRDRLQQAMARARREEHKVALLIFDLD-RFKEVNDS--- 672 Query: 587 MSGWTQEEAL 596 G + + + Sbjct: 673 -LGHSVGDLV 681 >UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LAF7_MAGSM Length = 951 Score = 857 bits (2216), Expect = 0.0, Method: Composition-based stats. Identities = 142/689 (20%), Positives = 281/689 (40%), Gaps = 22/689 (3%) Query: 422 QVNQQLMERITLANEAGGIGIWEWE--LKPNIFSWDKRMFELYEIPPHI-KPNWQVWYEC 478 +V ++ R E+ G++ + L+ + +M ++ + + Sbjct: 251 RVLRENDARFQALVESIHAGVYRTQVTLERRLVYASAQMHQVAGLSMQQCQEGGVSLKSL 310 Query: 479 VLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD-GIRHIRALANRVLNKEGEVERLLGIN 537 V+PED H ++ + S+++ P+++++RI G + + + +G+ G Sbjct: 311 VVPEDWPHVQEALEWSIKTHVPYEMQYRINHPQRGEMWVSDRGRIIKDHQGQPCWFDGAL 370 Query: 538 MDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALG 597 +++ E ++ + L K+ + + EA+V + +I +NP E+++G+ + E LG Sbjct: 371 LNIHEARETEQQLLLAKQ----VVQTASEAIVITNHKNQIMDVNPAYERITGFMRHEVLG 426 Query: 598 VPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGS 657 + + ++ ++ R+G + +I+ + G Sbjct: 427 RNPKI--TQSGRHDASFYATMWKHLVGEGHWSGEIWDRRRNGEIFPKWLAISAIRNRQGV 484 Query: 658 NIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALV 717 V V D++ + +QL +D LT L NR F +L + +++ +L+ Sbjct: 485 ISHFVGVFNDISRQKSTEQQLERLVFYDPLTQLPNRVLFRDRLIHEVGVAERSNKLMSLL 544 Query: 718 FIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN-VES 776 +DLDRFK +ND+ GH GD LL +++ +++ +R SD +ARLGGDEF ++LP E Sbjct: 545 LVDLDRFKIINDTLGHGVGDELLLQVSKRLIASVRKSDTVARLGGDEFAIILPGMERAED 604 Query: 777 ARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGG 836 A +A II+ + F E VGAS GI + + + AD A + +K G Sbjct: 605 AAHVAETIINQL-QVPFSIEENELFVGASIGIAVHGQDGDDYDSLTMNADAAMFKAKESG 663 Query: 837 RGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKL 896 +G + P +++R M + + R + +LM+ + + + +L Sbjct: 664 KGTYKFFTPDMNIQNAKRLVMEAELR-RAVDNQELMLHYQPKVD--AESRQIVGMEALVR 720 Query: 897 W-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA--VASKGISISLPLSVAG 953 W +I F + L L V Q + + + +++ LS Sbjct: 721 WVHPTRGVIPPGEFIPLAEETGLIVPLGELVLTRACAQVKQWWDMGLPQVQVAVNLSPRQ 780 Query: 954 LSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRLAGCRIVLSQVG 1009 L+ + E L + P L L I + E+V+KL+ G RI + G Sbjct: 781 FQEPNLIEKVSEILRKTGFPATGLELEITESIAMHDVDNTIETVKKLKDLGVRISIDDFG 840 Query: 1010 RDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPL 1069 + LK L +D ++ G+ +I+ I A+ + + +A V Sbjct: 841 TGYSSLSYLKKFPLHALKIDQSFVRDLGGDDDGASIISSIISMAKAMALGVVAEGVETAQ 900 Query: 1070 VMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 M+ L G + G ++ P + Sbjct: 901 QMEFLRGQECQQVQGFFLSKPLPPSDFLA 929 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 74/482 (15%), Positives = 158/482 (32%), Gaps = 68/482 (14%) Query: 128 ALGSAIVPPLLGGVLVVLLTPGDDPLRAF---------LIWVLSESIGALALVPLGLLFK 178 A + L+ ++ + ++ L+W + A ++ + L+ Sbjct: 37 LWAHAGLHALVEALVGFMGLFVAVVIKLLHRNQQVNGRLLW-----LCAGLVLSIPLMAL 91 Query: 179 PHYLLRHRNPRLLFESLLTL-------AITLTLSWLSMLYLPWPFTFIIVLLM-WS---- 226 N + +L TL + L W S LP+ I + LM W+ Sbjct: 92 HTAPGSDENVVIWLYALATLLGGGVSAGMLLGEQWHSQPRLPYAALLIALGLMGWAMFFP 151 Query: 227 ---------------AVRLPRMEAFLIFLTTVMMVS----------LMMAADPSLLATPR 261 AV + + A L ++S L++ L+A+ Sbjct: 152 EHIPDMGQWSQLSDLAVGMNLIGALGFVLAWFALISGHVVSGRRAPLLLGNFSLLMASAA 211 Query: 262 TYLMSHMPW------LPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGM 315 + W FL + A +++ + + + + E++ F+ +E G+ Sbjct: 212 IIFLLADTWDSRWWFYHFLRLAALALLLSYFFALYLKDFRVLRENDARFQALVESIHAGV 271 Query: 316 ALV--GTEGQWLQTNKALCQFLGYSQEELR--GLTFQQLTWPEDLNKDLQQVEKLISGEI 371 E + + + + Q G S ++ + G++ + L PED + +E I Sbjct: 272 YRTQVTLERRLVYASAQMHQVAGLSMQQCQEGGVSLKSLVVPEDWPHVQEALEWSIK-TH 330 Query: 372 NTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERI 431 Y M+ R + +W +++ G P +F + +I+E + TEQ + Sbjct: 331 VPYEMQYRINHPQRGEMWVSDRGRIIKDHQGQPCWFDGALLNIHEARETEQQLLLAKQ-- 388 Query: 432 TLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVI 491 + I K I + + H D + Sbjct: 389 --VVQTASEAIVITNHKNQIMDVNPAYERITGFMRHEVLGRNPKITQSGRHDAS-FYATM 445 Query: 492 RDSLQSRSPFKLEFRITVKDGIRHIRALA-NRVLNKEGEVERLLGINMDMTEVKQLNEAL 550 L + E ++G + LA + + N++G + +G+ D++ K + L Sbjct: 446 WKHLVGEGHWSGEIWDRRRNGEIFPKWLAISAIRNRQGVISHFVGVFNDISRQKSTEQQL 505 Query: 551 FQ 552 + Sbjct: 506 ER 507 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 67/561 (11%), Positives = 152/561 (27%), Gaps = 63/561 (11%) Query: 14 HPLLHLVSLGLVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRH-----AGRMWPGI 68 H L+ + + F+ + L LW +++ I Sbjct: 44 HALVEALVGFMGLFVAVVIKLLHRNQQVNGRLLWLCAGLVLSIPLMALHTAPGSDENVVI 103 Query: 69 ALSCSLGNIAASI---LLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQNLADWL 125 L + + +L + + +G + P + P L Sbjct: 104 WLYALATLLGGGVSAGMLLGEQWHSQPRLPYAALLIALGLMGWAMFFPEHIPDMGQWSQL 163 Query: 126 RLALGSAIVPPLLGGVLVVLLTPGDDPLRAFLIWVLSESIGALALVPLGLLFKPHYLLRH 185 + LG VL + +L + L + Sbjct: 164 SDLAVGMNLIGALGFVLAWFALISGHVVSGRRAPLLLGNFSLLMASAAIIFLLADTWDSR 223 Query: 186 RN------PRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVL---------------LM 224 L L + + F ++ L+ Sbjct: 224 WWFYHFLRLAALALLLSYFFALYLKDFRVLRENDARFQALVESIHAGVYRTQVTLERRLV 283 Query: 225 WSAVRLPRMEAFLIFLT----TVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPA 280 +++ ++ ++ + + ++ P + + +H+P+ I P Sbjct: 284 YASAQMHQVAGLSMQQCQEGGVSLKSLVVPEDWPHVQEALEWSIKTHVPYEMQYRINHPQ 343 Query: 281 NIMTMVMYAFR-------------------AERKHISESETHFRNAMEYSAIGMALVGTE 321 V R E + + + ++ ++ + + + Sbjct: 344 RGEMWVSDRGRIIKDHQGQPCWFDGALLNIHEARETEQQLLLAKQVVQTASEAIVITNHK 403 Query: 322 GQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYY 381 Q + N A + G+ + E+ G + + K + GE +S E Sbjct: 404 NQIMDVNPAYERITGFMRHEVLGRNPKITQSGRHDASFYATMWKHLVGE-GHWSGEIWDR 462 Query: 382 NRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIG 441 RNG++ LA+S +R+ G +F+ DI+ K TEQ ++L+ L + Sbjct: 463 RRNGEIFPKWLAISAIRNRQGVISHFVGVFNDISRQKSTEQQLERLVFYDPLTQLPNRVL 522 Query: 442 IWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQ--------HAEKVIRD 493 + + +R +L + +++ + + +R Sbjct: 523 F--RDRLIHEVGVAERSNKLMSLLLVDLDRFKIINDTLGHGVGDELLLQVSKRLIASVRK 580 Query: 494 SLQSRSPFKLEFRITVKDGIR 514 S EF I + R Sbjct: 581 SDTVARLGGDEFAIILPGMER 601 >UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FU0_DECAR Length = 1006 Score = 857 bits (2214), Expect = 0.0, Method: Composition-based stats. Identities = 159/705 (22%), Positives = 285/705 (40%), Gaps = 20/705 (2%) Query: 404 PLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYE 463 + + Q ER+T A +G WE L + ++ ++E Sbjct: 305 IAVVVGLYRSQRREQLVSQQLLLKEERLTAAQRIAQLGSWEIHLPSMHVTCSDELYRIFE 364 Query: 464 IPPHIKP-NWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALAN 521 +Q + + PEDR +K + +S+ SR P L+ R+ + DG ++++ Sbjct: 365 FTKRETGYQYQDFLAKIHPEDRSVVDKTLHESIASRQPASLKHRLLMPDGRVKYVLESCE 424 Query: 522 RVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMN 581 ++G R++G + ++T + + + + L + GEA++ D+ KI +N Sbjct: 425 TEYGRDGTPLRVIGTSQEVT----AQQEMLAQMQLLASAVQYSGEAILITDVKNKILTVN 480 Query: 582 PVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGS 641 P +++G+T EEA+G + E +++ R + ++ + GG Sbjct: 481 PAFTRLTGYTSEEAVGRDPSFL--SAGRTMPEEYERMWNGIAERGFWQGEIWDRRKDGGI 538 Query: 642 YDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLR 701 Y SI+ + DG V DV+ R +L + A HD LT L NR S + +L Sbjct: 539 YPKWMSISVIRGEDGMIRYHVAHFTDVSSERAAEERLHHMAHHDVLTGLLNRLSLKGRLD 598 Query: 702 ILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLG 761 L R A++F+DLDRFK +ND+ GH GD LL E+A+ + +R SDV+AR+G Sbjct: 599 QALAAARRDGSRVAVLFVDLDRFKVINDTLGHHVGDELLIEVANRLRDGVRDSDVVARVG 658 Query: 762 GDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAE 820 GDEF ++L + + +A +++ +V + G S GI + + Sbjct: 659 GDEFVIMLSGVEHTSAVAMVAEKLVFSVGQS-YQIGGYDLYSTPSIGIAIYPTDGEDGDI 717 Query: 821 VMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVAS 880 +M AD A Y +K GR ++ + A ER + R + + + V Sbjct: 718 LMKNADAAMYHAKMAGRNNFQFFDAKMNEAALERLNTEHALR-RALANQEFCLYYQPVID 776 Query: 881 PRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAA--KA 937 + R L +L W E ++ F + L L V +Q A A Sbjct: 777 --LASNRVASLEALIRWNHPEKGLLLPGKFIGIAEETGLIQPLGEWVLWAACRQLADFAA 834 Query: 938 VASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----V 993 GI + + +S + + L +E + PR L I ++ + Sbjct: 835 AGISGIKMGVNISAIQMRNGNLPLLARGVIEAYDIDPRNLIFEITESVAMEQPTETVRIL 894 Query: 994 QKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHA 1053 L G + + G + L+ ++L LD + + ++ G A Sbjct: 895 DLLNAMGVSVAIDDFGTGYSSLSYLRMFPINHLKLDRSFVEQIGEEIDGCVICDATIGLA 954 Query: 1054 QRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 L +K +A V +D L G D++ G + + P D ++ Sbjct: 955 HSLELKVVAEGVETQAQLDYLRSRGCDMVQGFLFSRPVPADEVLA 999 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 34/236 (14%), Positives = 80/236 (33%), Gaps = 11/236 (4%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 ++ + +A++YS + + + + L N A + GY+ EE G Sbjct: 439 TSQEVTAQQEMLAQMQLLASAVQYSGEAILITDVKNKILTVNPAFTRLTGYTSEEAVGRD 498 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 L+ + ++ +++ I+ E + E ++G + +++S++R DG Y Sbjct: 499 PSFLSAGRTMPEEYERMWNGIA-ERGFWQGEIWDRRKDGGIYPKWMSISVIRGEDGMIRY 557 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP 466 +A D++ + E+ + L + + + +R + Sbjct: 558 HVAHFTDVSSERAAEERLHHMAHHDVLTGLLNRLSL--KGRLDQALAAARRDGSRVAVLF 615 Query: 467 HIKPNWQVWYECVLP--------EDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIR 514 ++V + + E +RDS EF I + Sbjct: 616 VDLDRFKVINDTLGHHVGDELLIEVANRLRDGVRDSDVVARVGGDEFVIMLSGVEH 671 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 44/303 (14%), Positives = 104/303 (34%), Gaps = 28/303 (9%) Query: 263 YLMSHMPWLPFLLILLPANIMTMVMYAFRAER---KHISESETHFRNAMEYSAIGMALVG 319 + + L + + ++ + + R E+ + + E A + +G + Sbjct: 288 QRVIFVALLGCSMFVCLIAVVVGLYRSQRREQLVSQQLLLKEERLTAAQRIAQLGSWEIH 347 Query: 320 TEGQWLQTNKALCQFL-------GYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEIN 372 + + L + GY ++ PED + + + + I+ Sbjct: 348 LPSMHVTCSDELYRIFEFTKRETGYQYQDFLAK-----IHPEDRSVVDKTLHESIASRQP 402 Query: 373 TYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERIT 432 S++ R +G V + L + DGTPL I +++ +Q M+ + Sbjct: 403 A-SLKHRLLMPDGRVKYVLESCETEYGRDGTPLRVIGTSQEVT----AQQEMLAQMQLLA 457 Query: 433 LANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYE---CVLPEDRQHAEK 489 A + G I ++K I + + L + +PE+ + Sbjct: 458 SAVQYSGEAILITDVKNKILTVNPAFTRLTGYTSEEAVGRDPSFLSAGRTMPEEYERMWN 517 Query: 490 VIRDSLQSRSPFKLEFRITVKDGIRHIRALA-NRVLNKEGEVERLLGINMDMTEVKQLNE 548 I + R ++ E KDG + + ++ + + ++G + + D++ + E Sbjct: 518 GIAE----RGFWQGEIWDRRKDGGIYPKWMSISVIRGEDGMIRYHVAHFTDVSSERAAEE 573 Query: 549 ALF 551 L Sbjct: 574 RLH 576 >UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZ89_CHRVO Length = 936 Score = 857 bits (2214), Expect = 0.0, Method: Composition-based stats. Identities = 147/752 (19%), Positives = 286/752 (38%), Gaps = 25/752 (3%) Query: 360 LQQVEKLISGEINTYSMEKRYYNRNGDV--VWALLAVSLVRHTDGTPLYFIAQIEDINEL 417 L + +L++ E + G + L R D +A DI Sbjct: 186 LTEQARLLAELKLDSPFEWSRRDELGRLGTHLEWTRSELKRLVDELRAKTLALEADIARR 245 Query: 418 KRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYE 477 + E ++ + + GI L + + L W Sbjct: 246 REVEDALRRSENKYRELFWSNLDGIVISSLDGQVIDANPAFLNLMCYSLDQLKQQNFW-- 303 Query: 478 CVLPEDRQHAEKVIRDSLQSRSPFKLEFR---ITVKDGIRHIRALANRVLNKEGEVERLL 534 ++ E+ + E+ D+ R + EF + D + + + G + + Sbjct: 304 SLVAEESEALERFNLDNKVLRFGYCDEFEATYLNRFDNQVPVSVKTVAMRDAFGRINAVW 363 Query: 535 GINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEE 594 + D++E + E + + ++ E ++ D +I +N +++G+TQ E Sbjct: 364 RMVRDISEKRAAEERV----QLAAKVFENTVEGIMITDADRRIRSVNRAFTEITGYTQHE 419 Query: 595 ALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTL 654 LG + + + P E ++ + + + ++ ++G Y +I + Sbjct: 420 VLGQKTSIL--SSGRHDEPFYEQMWQSIAEHGSWQGELWNRRKNGEVYPEWLAINAVRNS 477 Query: 655 DGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRH 714 G V + D+TE + ++ + A D LT L NR + ++ + + +QR Sbjct: 478 LGEITHYVAIFSDLTERKAADERIQFLAHFDVLTSLPNRIHMQDRVELAIHNAVRDNQRL 537 Query: 715 ALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-N 773 AL+ +DLDRFK VN+S GH+AGD LL+ A + S++ ++LAR GGDEF +LLP + Sbjct: 538 ALLLLDLDRFKTVNESLGHSAGDTLLQVAADRIKSVMAPGEMLARQGGDEFIILLPVISD 597 Query: 774 VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASK 833 A A R+ V + S GI++ D+ ++ AD A Y +K Sbjct: 598 PGEAALAAERVRDVFA-NPIELHNHVLTITPSIGISVYPDDGRDYETLVRNADAAMYHAK 656 Query: 834 NGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLIS 893 + GR Y A E A+ ++ ++ ++ ++ + R + + Sbjct: 657 SSGRNSYKFYTADLNARAREILAIESQLRF-ALERDEFVLHYQPQV--EMESGRIVGAEA 713 Query: 894 LKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV--ASKGISISLPLS 950 L W ++ F + + + V E +Q + +++++ LS Sbjct: 714 LIRWNHPSLGLLGPVRFIQVAEERGFIVQIGNWVIAEATRQLVEWRRAGLPELTLAINLS 773 Query: 951 VAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH----AESVQKLRLAGCRIVLS 1006 L + + LE+S LP L + + I++ +++ ++ G R+ + Sbjct: 774 ALQFRQPDLALQVKQALESSGLPGHALDIEVTESIIMEDAQATIQTIDNMKNMGLRLSID 833 Query: 1007 QVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVV 1066 G + LK AD L +D ++ + D + I A+ L M+ +A V Sbjct: 834 DFGTGYSSLSYLKRFKADKLKIDRSFVRDIPQDADDSAIARAIINMAKNLNMQVVAEGVE 893 Query: 1067 LPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 L G D + G +IA P D Sbjct: 894 TMEQWQFLEQEGCDFVQGYLIAKPLPADDFAE 925 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 51/272 (18%), Positives = 94/272 (34%), Gaps = 6/272 (2%) Query: 281 NIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQE 340 + + R + SE +R + G+ + +GQ + N A + YS + Sbjct: 236 LALEADIARRREVEDALRRSENKYRELFWSNLDGIVISSLDGQVIDANPAFLNLMCYSLD 295 Query: 341 ELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHT 400 +L+ F L E + ++ + E Y NR + V + +R Sbjct: 296 QLKQQNFWSLVAEESEALERFNLDNKVLRFGYCDEFEATYLNRFDNQVPVSVKTVAMRDA 355 Query: 401 DGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFE 460 G + DI+E + E+ Q + E GI + I S ++ E Sbjct: 356 FGRINAVWRMVRDISEKRAAEERVQLAAK----VFENTVEGIMITDADRRIRSVNRAFTE 411 Query: 461 LYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA 520 + H + D + + + S+ ++ E K+G + LA Sbjct: 412 ITGYTQHEVLGQKTSILSSGRHD-EPFYEQMWQSIAEHGSWQGELWNRRKNGEVYPEWLA 470 Query: 521 N-RVLNKEGEVERLLGINMDMTEVKQLNEALF 551 V N GE+ + I D+TE K +E + Sbjct: 471 INAVRNSLGEITHYVAIFSDLTERKAADERIQ 502 >UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxalobacteraceae RepID=A6T0F0_JANMA Length = 699 Score = 855 bits (2211), Expect = 0.0, Method: Composition-based stats. Identities = 150/681 (22%), Positives = 272/681 (39%), Gaps = 18/681 (2%) Query: 426 QLMERITLANEAGGIGIW---EWELKPNIFSWDKRMFELYEIPPHIKP--NWQVWYECVL 480 L R+ A G+ + + + F L + + + Sbjct: 13 TLQARLLSTLLANLEGMVYRCRLDAHWTMEFVSEGCFALTGYTEEDLLFNSRVSYDQITH 72 Query: 481 PEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLNKEGEVERLLGINMD 539 P+DR+H I +++++ F +E+RI DG IRH+ + + + L G D Sbjct: 73 PDDRRHVRDTILEAVRNNRRFDIEYRIVRADGSIRHVWERGTNISHDNKAWDILEGFIQD 132 Query: 540 MTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVP 599 +TE KQ +EAL + + R ++ E + + +NP +M G+ +AL Sbjct: 133 VTERKQADEALREAERRYRSIFENAIEGIYQSTPSDGYLAVNPALARMYGYDSPQALIST 192 Query: 600 LLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNI 659 L + + + D +E + +H R+G + + + DG+ + Sbjct: 193 LRDIDNQVYVDPQRRLEFKRLMAKHGVVTNFESRVHRRNGEVIWISENARSVYNSDGTLL 252 Query: 660 GSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFI 719 ++ +TE + ++ + A+HDALT L NR +++ + + A+ F+ Sbjct: 253 FFEGTVEAITERKLHEAEIQFQATHDALTGLPNRTLLYDRMQQAVLHSERYGKLTAIAFL 312 Query: 720 DLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESAR- 778 DLD+FK +NDS GH GD LL+ A + S LR SD +AR GGDEF LLL D E A Sbjct: 313 DLDQFKFINDSLGHQVGDELLKITAQRLTSCLRESDTVARQGGDEFVLLLTDQPNEEAIT 372 Query: 779 FIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRG 838 R++ V+ + ++ S G+TL D+ A ++ AD A Y +K GR Sbjct: 373 HTMQRVLHEVSQ-PWKANDLEFQITCSIGLTLCPDDGRDAETLLKNADSAMYKAKELGRN 431 Query: 839 RVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWS 898 + + ++ ++R + L+ + I ++ S + + + +L W+ Sbjct: 432 NFQYFSAEMNSSVTDRLEL-LNRLRQAITNEDFVLHYQPKVS--LASHQIIGAEALVRWN 488 Query: 899 CEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS--KGISISLPLSVAGLS 955 ++ +F + L L V +Q + I IS+ LS L+ Sbjct: 489 SAHSGMVSPASFIPLAEETGLIIPLGEWVLRTACRQNRAWQDAGYPPIPISVNLSPRQLA 548 Query: 956 SATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRD 1011 +V + L + L + L L I + E + +LR G +I L G Sbjct: 549 RGDIVEVVERILTETGLEAQHLELEITESVMTTDVEKSFALLTQLRSLGVKISLDDFGTG 608 Query: 1012 LQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVM 1071 + LK D L +D ++ + ++ I + L + +A + Sbjct: 609 YSSLSYLKRFPVDTLKIDQSFVRDIATDQDSAAIVKAIISLGRNLNLTVLAEGIETEDQF 668 Query: 1072 DTLSGIGVDLIYGEVIADAQP 1092 L G D G +++ P Sbjct: 669 QFLLANGCDEGQGYLMSKPVP 689 Score = 150 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 38/276 (13%), Positives = 91/276 (32%), Gaps = 20/276 (7%) Query: 301 ETHFRNAMEYSAIGMA---LVGTEGQWLQTNKALCQFLGYSQEELR---GLTFQQLTWPE 354 + + + + GM + ++ GY++E+L +++ Q+T P+ Sbjct: 15 QARLLSTLLANLEGMVYRCRLDAHWTMEFVSEGCFALTGYTEEDLLFNSRVSYDQITHPD 74 Query: 355 DLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDI 414 D + + + + +E R +G + + + H + I+D+ Sbjct: 75 DRRHVRDTILEAVRNNR-RFDIEYRIVRADGSIRHVWERGTNISHDNKAWDILEGFIQDV 133 Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI--PPHIKPNW 472 E K+ ++ ++ R E GI++ + + + +Y P + Sbjct: 134 TERKQADEALREAERRYRSIFENAIEGIYQSTPSDGYLAVNPALARMYGYDSPQALISTL 193 Query: 473 QVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRI-TVKDGIRHIRALANRVLNKEGEVE 531 + V + ++ + R + E R+ + I A V N +G + Sbjct: 194 RDIDNQVYVDPQRRL-EFKRLMAKHGVVTNFESRVHRRNGEVIWISENARSVYNSDGTLL 252 Query: 532 RLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEA 567 G +TE K + + +A Sbjct: 253 FFEGTVEAITERKLHEAEIQ---------FQATHDA 279 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 47/268 (17%), Positives = 97/268 (36%), Gaps = 13/268 (4%) Query: 285 MVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRG 344 + + + + E+E +R+ E + G+ +L N AL + GY + Sbjct: 131 QDVTERKQADEALREAERRYRSIFENAIEGIYQSTPSDGYLAVNPALARMYGYDSPQALI 190 Query: 345 LTFQQLTWPEDLNKDLQ-QVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGT 403 T + + ++ + + ++L++ + E R + RNG+V+W V ++DGT Sbjct: 191 STLRDIDNQVYVDPQRRLEFKRLMAKHGVVTNFESRVHRRNGEVIWISENARSVYNSDGT 250 Query: 404 PLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYE 463 L+F +E I E K E Q L ++ + +R +L Sbjct: 251 LLFFEGTVEAITERKLHEAEIQFQATHDALTGLPNRTLLY--DRMQQAVLHSERYGKLTA 308 Query: 464 IPPHIKPNWQVWYECVLPED--------RQHAEKVIRDSLQSRSPFKLEFRITVKDG--I 513 I ++ + + + Q +R+S EF + + D Sbjct: 309 IAFLDLDQFKFINDSLGHQVGDELLKITAQRLTSCLRESDTVARQGGDEFVLLLTDQPNE 368 Query: 514 RHIRALANRVLNKEGEVERLLGINMDMT 541 I RVL++ + + + +T Sbjct: 369 EAITHTMQRVLHEVSQPWKANDLEFQIT 396 >UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L724_9DELT Length = 827 Score = 855 bits (2211), Expect = 0.0, Method: Composition-based stats. Identities = 176/811 (21%), Positives = 317/811 (39%), Gaps = 34/811 (4%) Query: 304 FRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWP-------EDL 356 FR S L +G L N A G E+ GL +++ P D Sbjct: 17 FRRVFLCSPNAALLRDADGTVLAANAAFEALFGVEIPEVVGLDLREVLRPVSSRPGRADR 76 Query: 357 NKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINE 416 + +V L + E R+ GD ++ V P+ + DI Sbjct: 77 PDEDGEVWSL---RGAAFLRETRWAAGEGDAADVRVSQFPVGMLGDRPITCM-LFRDIAS 132 Query: 417 LKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPN--WQV 474 E + + E GI++ ++ + +Y + ++ Sbjct: 133 RLLAEDRLRDAERKYRSIFENAVEGIFQTTPAGRYLEVNRTLARIYGFESVAEMREFFRD 192 Query: 475 WYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLNKEGEVERL 533 + + R+ + +R+ E I KDG + I A V +G Sbjct: 193 IRNQLYVDPRRR-DDFVRELAAHDQVRDFESEIRKKDGTVIWISENARVVRGADGLPAYY 251 Query: 534 LGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQE 593 G +D+T+ K+ AL ++ + +A+ IDM I N E + G+ Sbjct: 252 EGTVVDITDRKRAEAALATQRAYFTQLFANSPQAIALIDMHRNIVDANKAFEALFGYRTA 311 Query: 594 EALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLST 653 + G + + + EN+ A + + ++ V G V P+ Sbjct: 312 DIQGFGMRAFIVPEHLLSE--CENMRCAVLAGKPVVRETVRRHCDGRLIPVSMIGFPI-E 368 Query: 654 LDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTH-Q 712 + G G V + QD++E + Q+++ A HDALT L NR+ F +L L Sbjct: 369 IAGETQGIVYIYQDISERKAFEEQITHQAFHDALTGLPNRSLFADRLERALTRARRRGDS 428 Query: 713 RHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC 772 ++A++ IDL++FK VND+ GH AGD LL E+A + +RS D +ARLGGDEF ++L + Sbjct: 429 QYAVLMIDLNKFKGVNDTLGHQAGDQLLVEVARRLSGCVRSMDTVARLGGDEFAVILEEF 488 Query: 773 -NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYA 831 + + RI + F+ G+ AS GI L + A +++ ADIA Y Sbjct: 489 KTKKEVMTVVERIGVGLGK-PFVLCGKTVTPEASIGIVLHTRDYAAADDLLRDADIAMYR 547 Query: 832 SKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWL 891 +K GR + +++ + E ++ D + + ++ +L++ + + ++R + Sbjct: 548 AKEQGRASM-IFDRKMHQEILEAISLETDLR-QALEAGELLLHYQPIVDVK--DSRIVGF 603 Query: 892 ISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV----ASKGISIS 946 +L W + ++ F + L L R V E +Q + +S+S Sbjct: 604 EALVRWDHPDRGLVPPGQFIPLAEETGLILPLGRFVIDEACRQLRAWQLEMPEAADLSVS 663 Query: 947 LPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCR 1002 + +S LV + + L + LPP L L I ++ AE + +L+ G + Sbjct: 664 VNVSCRQFVKDGLVEHVAQVLAATGLPPACLKLEITESVLMHDAEHTARELNRLKALGVK 723 Query: 1003 IVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIA 1062 I + G + L+ D+L +D + + + ++ I A+ LG+ IA Sbjct: 724 IAIDDFGTGYSSLSYLRQLPIDHLKIDRSFISGQGCDGESQEIVKSIISLARSLGLTVIA 783 Query: 1063 GPVVLPLVMDTLSGIGVDLIYGEVIADAQPL 1093 V P +D L D G + + Sbjct: 784 EGVECPDQLDRLRLADCDKAQGFMFSRPVEA 814 Score = 174 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 50/320 (15%), Positives = 113/320 (35%), Gaps = 12/320 (3%) Query: 240 LTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISE 299 + ++ + + + + + L ++ + + + + Sbjct: 83 VWSLRGAAFLRETRWAAGEGDAADVRVSQFPVGMLGDRPITCMLFRDIASRLLAEDRLRD 142 Query: 300 SETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGY-SQEELRGLTFQQL-----TWP 353 +E +R+ E + G+ G++L+ N+ L + G+ S E+R F+ + P Sbjct: 143 AERKYRSIFENAVEGIFQTTPAGRYLEVNRTLARIYGFESVAEMR-EFFRDIRNQLYVDP 201 Query: 354 EDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIED 413 + ++++ E ++G V+W +VR DG P Y+ + D Sbjct: 202 RRRDDFVRELAAH----DQVRDFESEIRKKDGTVIWISENARVVRGADGLPAYYEGTVVD 257 Query: 414 INELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQ 473 I + KR E T I ++ NI +K L+ + Sbjct: 258 ITDRKRAEAALATQRAYFTQLFANSPQAIALIDMHRNIVDANKAFEALFGYRTADIQGFG 317 Query: 474 VWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERL 533 + ++PE + +R ++ + P E DG ++ + GE + + Sbjct: 318 M-RAFIVPEHLLSECENMRCAVLAGKPVVRETVRRHCDGRLIPVSMIGFPIEIAGETQGI 376 Query: 534 LGINMDMTEVKQLNEALFQE 553 + I D++E K E + + Sbjct: 377 VYIYQDISERKAFEEQITHQ 396 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 72/236 (30%), Gaps = 6/236 (2%) Query: 286 VMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGL 345 + + ++ +F S +AL+ + NKA GY +++G Sbjct: 257 DITDRKRAEAALATQRAYFTQLFANSPQAIALIDMHRNIVDANKAFEALFGYRTADIQGF 316 Query: 346 TFQQLTWPEDLNKDLQQVE-KLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTP 404 + PE L + + + +++G+ E + +G ++ + + G Sbjct: 317 GMRAFIVPEHLLSECENMRCAVLAGK--PVVRETVRRHCDGRLIPVSMIGFPIEIA-GET 373 Query: 405 LYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI 464 + +DI+E K E+ L + L+ + +R Y + Sbjct: 374 QGIVYIYQDISERKAFEEQITHQAFHDALTGLPNRSLFAD-RLERALTRARRRGDSQYAV 432 Query: 465 PPHIKPNWQVWYECV-LPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRAL 519 ++ + + Q +V R R+ + + Sbjct: 433 LMIDLNKFKGVNDTLGHQAGDQLLVEVARRLSGCVRSMDTVARLGGDEFAVILEEF 488 >UniRef50_Q4C8S6 PAS:GGDEF n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4C8S6_CROWT Length = 906 Score = 855 bits (2210), Expect = 0.0, Method: Composition-based stats. Identities = 165/845 (19%), Positives = 326/845 (38%), Gaps = 46/845 (5%) Query: 283 MTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEEL 342 ++ V+ + + ++ E H+ A+++S G + + ++ + + G Sbjct: 84 LSQVLAELHSTQATLNSRENHYAQALKFSQTGSWEFDVVTEKVFWSEEVERIWGMEPGTF 143 Query: 343 RG--LTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHT 400 RG Q PED+ + V+ + + +E R + + + W S + Sbjct: 144 RGELQQVQGAIHPEDVEHWQKNVQDCRE-KGKEHRIEYRIIHPDASIHWVQALGSAEKDD 202 Query: 401 DGTPLYFIAQIEDINELKR-------TEQVNQQLMERITLANEAGGIGIWEWELKPNIFS 453 G + + + DI E K+ TE ++ + + +W + Sbjct: 203 QGNVIRLLGIVMDITERKQLELEHKETEMALRESEALFRNMADHAPVMVWVTDETGYSTY 262 Query: 454 WDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGI 513 + ++ + W + + P++R+ A K + + R PF +++R +DG+ Sbjct: 263 VSQSWYDFSGQKEGTALGFG-WLDVIHPDERELARKRFLEFNEKRQPFSIDYRFRRRDGV 321 Query: 514 RHIRALAN-RVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCID 572 A + +G+ + +G MD+++ K++ E L + + + + ID Sbjct: 322 YCWGIDAGKPRFSADGQFKGYIGSVMDISDRKRMEEQL----RIFECIVATTQDMMALID 377 Query: 573 MAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDV 632 +N + +EE +G V+ I + ++ + + Sbjct: 378 QNYTYQIVNDAYARNFQRAKEEIIGKS---VVEIVGEEFMDTIQPHLDRCLQGEEVRYET 434 Query: 633 VLHCRS-GGS-YDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHL 690 G H +P + +V+ I D+T+ ++ ++L Y A HD LT+L Sbjct: 435 WF---DLGEEQRYYHALYSPYREANKGVTSAVVNIHDITQIKESEQKLYYQAHHDTLTNL 491 Query: 691 ANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSM 750 NR +L +Q + A+VFIDLDRFK +NDS GH AGD+LL +LA + Sbjct: 492 PNRMLMNTRLEQSIQQATRKGDKLAVVFIDLDRFKNINDSLGHRAGDSLLEQLAQRLCQQ 551 Query: 751 LRSSDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGIT 809 R SD +AR+ GDEF ++L D + + A + +++ + FI EGR ++ +S G++ Sbjct: 552 RRKSDTVARISGDEFVVILEDIKDTQHAGMVVGKLMRTFEE-PFIIEGRTIKMTSSMGLS 610 Query: 810 LIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKEN 869 L D+ A ++ AD A Y +K GR Y + + E + + +K+ Sbjct: 611 LFPDDGTDVATLLRNADAAMYRAKEDGRNTYCFYRKEMTSTVFEYMLLENALR-EALKKK 669 Query: 870 QLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFH 928 + +L + R L + +L W E ++ F L + V Sbjct: 670 EFYLLYQPQI--EMLSHRCLGIEALLRWHHPELGVVSPAQFIPIAEQSGLIQEIGTWVLT 727 Query: 929 EFFQQAAKAVASKG--ISISLPLSVAGLSSATLVNDLLEQLENSPLPPRL--------LH 978 +QA + K I++ ++ + + + L+ + LP L Sbjct: 728 TACRQAKIWLEQKLDFGRIAVNVAAPQIQHGDFIQVVENVLKTTGLPAAYLELELTEGLL 787 Query: 979 LIIPAEAILDHAESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQG 1038 + + + ++KL+ G ++ + G N LK D L +D ++ Sbjct: 788 MKQTE----QNIKQLEKLQGMGIKLTIDDFGIGYSSLNYLKRLPIDKLKIDQSFIRDLPH 843 Query: 1039 NLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 + D + + L ++ IA V L G G + P + Sbjct: 844 DTNDTAISQAVIALGYALNLQIIAEGVENEEQAAFLKEKGCHQAQGYFFSQPIPPQQV-- 901 Query: 1099 SSYFA 1103 S+ FA Sbjct: 902 SALFA 906 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 42/281 (14%), Positives = 98/281 (34%), Gaps = 7/281 (2%) Query: 271 LPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKA 330 + L I++ + + + ESE FRN +++ + + + G +++ Sbjct: 207 IRLLGIVMDITERKQLELEHKETEMALRESEALFRNMADHAPVMVWVTDETGYSTYVSQS 266 Query: 331 LCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWA 390 F G + G + + P++ ++ + + + +S++ R+ R+G W Sbjct: 267 WYDFSGQKEGTALGFGWLDVIHPDERELARKRFLE-FNEKRQPFSIDYRFRRRDGVYCWG 325 Query: 391 LLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPN 450 + A DG +I + DI++ KR E+ + + + Sbjct: 326 IDAGKPRFSADGQFKGYIGSVMDISDRKRMEEQLRI----FECIVATTQDMMALIDQNYT 381 Query: 451 IFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVK 510 + ++ V E V E + + LQ + E + Sbjct: 382 YQIVNDAYARNFQRAKEEIIGKSV-VEIVGEEFMDTIQPHLDRCLQ-GEEVRYETWFDLG 439 Query: 511 DGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALF 551 + R+ AL + V + D+T++K+ + L+ Sbjct: 440 EEQRYYHALYSPYREANKGVTSAVVNIHDITQIKESEQKLY 480 >UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZE4_9PROT Length = 727 Score = 854 bits (2208), Expect = 0.0, Method: Composition-based stats. Identities = 126/561 (22%), Positives = 227/561 (40%), Gaps = 21/561 (3%) Query: 550 LFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFG 609 L +++ L +S V+ D I +NP +++G+ EE G + + Sbjct: 167 LIDQRDLLETVFESSYSGVMITDAKGNIVEVNPAFTRITGYQSEEVQGRNPHLL--ASGR 224 Query: 610 DNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVT 669 + ++ + E ++ ++G Y +I P+ + G+ + V + DVT Sbjct: 225 HDHTFYREMWDDILANGHWEGEIWDRRKNGEVYPSWMNINPVRDISGNLLYYVGIFSDVT 284 Query: 670 ESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVND 729 + ++ Q+ A +D LT L NR ++L+ + A++F+DLD FK +ND Sbjct: 285 KRKEAEAQIHQLAFYDPLTELPNRRLLNERLQQAFSVGARSGHHGAVLFLDLDNFKTLND 344 Query: 730 SAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN------VESARFIATR 783 + GH GD LL E+A + S +R+ D +ARLGGDEF ++L + A +A + Sbjct: 345 TKGHDIGDQLLIEVAKRLNSCVRNGDTVARLGGDEFVVVLESLSSVPDEAATQADLVAEK 404 Query: 784 IISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVY 843 I A++ + VHR S G+ + + EV+ AD A Y +K GR + Y Sbjct: 405 IRYALSQ-PYQLANHVHRTTPSIGVVMFRGHQQSLEEVLKFADTAMYQAKTAGRNAIRFY 463 Query: 844 EPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGE 902 +P A+ RA +E ++++ NQL + R L L W E Sbjct: 464 DPVMQASIEARAE-LEEELRQVVERNQLRLYYQVQMD---SSNRPLGAEVLLRWQHPERG 519 Query: 903 IIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK---GISISLPLSVAGLSSATL 959 ++ F + + V Q + +++++ +S S Sbjct: 520 LVSPAQFIPMAEETGHIVPIGLWVLQTACTQLKVWQSDPLTCDLTLAVNVSAKQFRSMDF 579 Query: 960 VNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLSQVGRDLQIF 1015 V+ + L S P LL L + +L++ E +++L+L G + G Sbjct: 580 VSQVQRTLAQSGAKPSLLKLELTESLVLENVEDTIAKMRELKLLGVSFSMDDFGTGYSSL 639 Query: 1016 NSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLS 1075 LK D + +D ++ + D ++ I ++ LG+ IA V + L Sbjct: 640 QYLKRLPLDQIKIDQSFVRDIASDSNDAAIVQTIIAMSEVLGLNVIAEGVETEAQREFLD 699 Query: 1076 GIGVDLIYGEVIADAQPLDLL 1096 G G + PL Sbjct: 700 LRGCHAFQGYLFGRPAPLAEF 720 Score = 142 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 45/286 (15%), Positives = 87/286 (30%), Gaps = 6/286 (2%) Query: 250 MAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAME 309 + P+T L P L L A ++ + + + E Sbjct: 123 GVIVLLAVEIPKTSLPLTTMLQPVLAHLAKAIVL---CRNNDVHTRGLIDQRDLLETVFE 179 Query: 310 YSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISG 369 S G+ + +G ++ N A + GY EE++G L + +++ I Sbjct: 180 SSYSGVMITDAKGNIVEVNPAFTRITGYQSEEVQGRNPHLLASGRHDHTFYREMWDDILA 239 Query: 370 EINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLME 429 + E +NG+V + + ++ VR G LY++ D+ + K E QL Sbjct: 240 N-GHWEGEIWDRRKNGEVYPSWMNINPVRDISGNLLYYVGIFSDVTKRKEAEAQIHQLAF 298 Query: 430 RITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEK 489 L + E FS R + N++ + + Sbjct: 299 YDPLTELPNRRLL--NERLQQAFSVGARSGHHGAVLFLDLDNFKTLNDTKGHDIGDQLLI 356 Query: 490 VIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLG 535 + L S D + + V ++ L+ Sbjct: 357 EVAKRLNSCVRNGDTVARLGGDEFVVVLESLSSVPDEAATQADLVA 402 Score = 72.4 bits (177), Expect = 9e-11, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 42/130 (32%), Gaps = 2/130 (1%) Query: 424 NQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPED 483 + + E+ G+ + K NI + + D Sbjct: 167 LIDQRDLLETVFESSYSGVMITDAKGNIVEVNPAFTRITGYQSEEVQGRNPHLLASGRHD 226 Query: 484 RQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRAL-ANRVLNKEGEVERLLGINMDMTE 542 ++ D L + ++ E K+G + + N V + G + +GI D+T+ Sbjct: 227 HTFYREMWDDILANGH-WEGEIWDRRKNGEVYPSWMNINPVRDISGNLLYYVGIFSDVTK 285 Query: 543 VKQLNEALFQ 552 K+ + Q Sbjct: 286 RKEAEAQIHQ 295 >UniRef50_Q2BHU8 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BHU8_9GAMM Length = 892 Score = 853 bits (2205), Expect = 0.0, Method: Composition-based stats. Identities = 147/718 (20%), Positives = 283/718 (39%), Gaps = 37/718 (5%) Query: 409 AQIEDINELKRTEQVNQQLM-------ERITLANEAGGIGIWEWELKPNIFSWDKRMFEL 461 + K+ E ++ R+ A ++E +++ + + Sbjct: 184 GLLSQQISRKKAEAALRESERTSNHARHRLEATFSAIPDLLFEMDIEGRYLACHASDPDD 243 Query: 462 YEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALAN 521 P V+ + + ++ Q + IR++ + + V G+R + Sbjct: 244 LVAKPEELIGKSVF-DFIPLDEAQIIVEAIREADLKGISKGRQVTLQVGRGLREFELSVS 302 Query: 522 RVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMN 581 R + E + ++ D+TE K+ L D E ++ D +I +N Sbjct: 303 RKHDDESSEHHFIVLSRDITERKRHERELH----IAATAFD-SQEGMLITDAEHRILRVN 357 Query: 582 PVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGS 641 +++G+ EEA+G + + + + + + + + + +V +SG Sbjct: 358 NAFTRVTGYEAEEAIGNTPAFLQ--SGKHSEDFYQTMMESLSKNNYWQGEVWNQRKSGEI 415 Query: 642 YDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLR 701 Y H +IT + T G V D+T+ ++ + A +D+LT L NR S +++L Sbjct: 416 YPQHLTITAVQTSAGEITNYVGAFTDITQRKQDEADIHQLAFYDSLTGLPNRRSLQERLD 475 Query: 702 ILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLG 761 L + T Q A+ FIDLD FK +ND+AGH GD LL E+A+ + S +R++D++ARLG Sbjct: 476 SALSSCRHTRQLGAVFFIDLDNFKNLNDTAGHDQGDKLLVEVANRLNSCVRNADMVARLG 535 Query: 762 GDEFGLLLPDCNVESARFIAT------RIISAVNDYHFIWEGRVHRVGASAGITLIDDNN 815 GDEF ++L + V+ + +A ++I + + + S GI L + + Sbjct: 536 GDEFIVILENLGVDESNVLAQVKDIVAKVILTI-QAPLTIGTQAYHPTCSIGIALFSEKD 594 Query: 816 HQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLA 875 EVM ++D+A Y +K+ G+ ++P A A M D ++ + QL + Sbjct: 595 FS-DEVMKRSDMAMYQAKSSGKNTYRFFDPVAEEALCSLARMDADLRF-ALSNQQLELHY 652 Query: 876 HGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQA 934 + + +L W + ++ F D L + V + +Q Sbjct: 653 QPQYRCQT----LIGAEALLRWKHPDRGMVSPAEFIPLAEDTGLILPIGEWVIRQACKQL 708 Query: 935 AKAVASK---GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE 991 + + I++ +S V + + L + L L + +L E Sbjct: 709 QQWQERPETAELFIAVNVSARQFCQDNFVESVRQLLNTYGVSAEKLKLELTESLVLMDVE 768 Query: 992 ----SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLIT 1047 +Q LR G R L G + LK D + +D +V + D ++ Sbjct: 769 DTIQKMQALRSYGIRFALDDFGTGYSSLSHLKRLPLDQIKIDRSFIRDVPEDQDDSEIVQ 828 Query: 1048 IIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNSSYFAIN 1105 I Q LG+ +A V + L+ + I G ++ +D ++Y N Sbjct: 829 AIIAMGQNLGLNVLAEGVETDEQLAFLTELDCLDIQGFLLGRPSSIDKF-ETTYIPAN 885 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 66/477 (13%), Positives = 151/477 (31%), Gaps = 41/477 (8%) Query: 94 TTINIVEAVV--GAVLLRKLLPWYNPLQNLA--DWLRLALGSAIVPPLLGGVLVVLLTPG 149 + +I+ +V A+LL + + N A + I+ + ++ + L+ Sbjct: 1 MSGDILLPLVNNVALLLAMGVLFDAFAFNEAKPSLPKRITSGLILGCIAIAIMSMPLSIT 60 Query: 150 DDPL---RAFLIWVLSESIGALALVPLGLLFKPHYLLRHRNPRLLFESLLTLAITLTLSW 206 + R+ L+ V G + V + ++ + ++ + + + Sbjct: 61 SGVIIDTRSILLSVSGLFFGVIPTVIAASMAAVFRIMEGGQGTIAGLLIIMTSAGIGIYC 120 Query: 207 LSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMS 266 L ++ ++ + + MMV L++ +L + Sbjct: 121 YQWKQR----------LGHEVIKGYQLYLMGLTVHVSMMVCLLVLPYSTLGLLLSEITLP 170 Query: 267 HMPWLPFLLILLPANIMTMVMYAFRAERKHISESET-------HFRNAMEYSAIGMALVG 319 + P +LL + + + + + ESE + + Sbjct: 171 IIVIFPLATVLLGGLLSQQI--SRKKAEAALRESERTSNHARHRLEATFSAIPDLLFEMD 228 Query: 320 TEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKL-ISGEINTYSMEK 378 EG++L + + L EEL G + ++ ++ + + + G + Sbjct: 229 IEGRYLACHASDPDDLVAKPEELIGKSVFDFIPLDEAQIIVEAIREADLKGISKGRQVTL 288 Query: 379 RYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAG 438 + + L+VS + + +FI DI E KR E+ I Sbjct: 289 QVGR---GLREFELSVSRKHDDESSEHHFIVLSRDITERKRHEREL-----HIAATAFDS 340 Query: 439 GIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECV--LPEDRQHAEKVIRDSLQ 496 G+ + + I + + + ED + + +SL Sbjct: 341 QEGMLITDAEHRILRVNNAFTRVTGYEAEEAIGNTPAFLQSGKHSED---FYQTMMESLS 397 Query: 497 SRSPFKLEFRITVKDGIRHIRALANR-VLNKEGEVERLLGINMDMTEVKQLNEALFQ 552 + ++ E K G + + L V GE+ +G D+T+ KQ + Q Sbjct: 398 KNNYWQGEVWNQRKSGEIYPQHLTITAVQTSAGEITNYVGAFTDITQRKQDEADIHQ 454 Score = 136 bits (343), Expect = 6e-30, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 88/256 (34%), Gaps = 11/256 (4%) Query: 282 IMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEE 341 +++ + + + + + A + S GM + E + L+ N A + GY EE Sbjct: 316 VLSRDITERKRHERELHIA----ATAFD-SQEGMLITDAEHRILRVNNAFTRVTGYEAEE 370 Query: 342 LRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTD 401 G T L + Q + + +S + N + E ++G++ L ++ V+ + Sbjct: 371 AIGNTPAFLQSGKHSEDFYQTMMESLS-KNNYWQGEVWNQRKSGEIYPQHLTITAVQTSA 429 Query: 402 GTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFEL 461 G ++ DI + K+ E QL +L + + + R Sbjct: 430 GEITNYVGAFTDITQRKQDEADIHQLAFYDSLTGLPNRR---SLQERLDSALSSCRHTRQ 486 Query: 462 YEIPPH-IKPNWQVWYECVLPEDRQHAEKVIRDSLQSR-SPFKLEFRITVKDGIRHIRAL 519 N++ + + + + L S + R+ + I + L Sbjct: 487 LGAVFFIDLDNFKNLNDTAGHDQGDKLLVEVANRLNSCVRNADMVARLGGDEFIVILENL 546 Query: 520 ANRVLNKEGEVERLLG 535 N +V+ ++ Sbjct: 547 GVDESNVLAQVKDIVA 562 >UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q47ES6_DECAR Length = 832 Score = 853 bits (2205), Expect = 0.0, Method: Composition-based stats. Identities = 172/824 (20%), Positives = 309/824 (37%), Gaps = 38/824 (4%) Query: 305 RNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVE 364 ++ A + G ++ N+ LG E+ G +L E + + Sbjct: 16 EALLDKLATPVFAKNLNGLYIYANEMAGIMLGRPAPEILGRKDSELFASELAGRMQTCDD 75 Query: 365 KLISGEINTYSMEKRYYNRN-GDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQV 423 KL++ + S E +R G L ++R G + + DI + KR E Sbjct: 76 KLLAS-GESASCEIWLPDRGHGGERCYWLVRKVLRDKKGQIVGLASVATDITDRKRQELE 134 Query: 424 NQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPED 483 L + +A ++E +++ + +L P V +E + P+ Sbjct: 135 LIALKNKFAATLQALPDLMFELDIEGQFLDCHAQQSKLLVGSPSDMVGKTV-HEVLPPDV 193 Query: 484 RQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEV 543 + + ++++ +F++ + +G R + + + ++ D+T+ Sbjct: 194 AAIFIQSLHEAMEQGISTGSQFQLDLPEGSRRFELSVAQKASDGDHQPHFIVLSRDITDR 253 Query: 544 KQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTV 603 K AL + + + +D+ D+ + N + + G LG Sbjct: 254 KNAEHALRESESLMRAIVDNTPVEYWARDLEGRCIMENALVVEHWG----SLLGKRPED- 308 Query: 604 LHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVL 663 D + + IE +V G + + + P+ +DG IG V Sbjct: 309 -SGVSPDELAVWQENNRRVYEGEVIEAEVEYQ-VGGQTRIFNNVVAPIK-VDGQTIGIVG 365 Query: 664 VIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDR 723 QD+T+ ++ ++ A +D+LTHL NR +L L AL+ IDLD Sbjct: 366 FNQDITDRKRNEEEIHRLAFYDSLTHLPNRRLMFDRLEHALIGSARRKSHGALLLIDLDN 425 Query: 724 FKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE-----SAR 778 FK +ND+ GH GD LL E+A + + +R D ARLGGDEF ++L D + A Sbjct: 426 FKFLNDTHGHEVGDELLLEVAKRLKTCIRQGDTAARLGGDEFVVILEDIDGAGNGTIQAE 485 Query: 779 FIATRIISAVNDYHFIWE------GRVHRVGASAGITLIDDNNHQAAEVMSQADIACYAS 832 IA I + +N + F +R +S GI L DD A E++ +AD A Y + Sbjct: 486 LIAGHIQAQLN-HPFSLVRPPERLSIDYRCASSIGIALFDDTMVTAKELLRRADTAMYQA 544 Query: 833 KNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLI 892 K GR + ++P+ AA + RAA+ + + + I E Q + R Sbjct: 545 KAAGRNTLRFFDPEMQAAVTHRAALETELR-KAIDEQQFHLCFQVQMD---QSGRPTGGE 600 Query: 893 SLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK---GISISLP 948 +L W I +F + L + + V +Q A G+++++ Sbjct: 601 ALLRWEHPTRGTIPPASFIPLAEETGLIVPIGQWVLATACRQLAAWSQQPETSGLTLAVN 660 Query: 949 LSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIV 1004 +S A + L + L + P L L + +L+ E + +L+ G R Sbjct: 661 VSARQFRQARFTDQLRDLLLQTGAPATRLKLELTESMMLEDTEAIIGRMAELKQLGIRFS 720 Query: 1005 LSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGP 1064 L G LK + L +D +V + D + I LG++ IA Sbjct: 721 LDDFGTGYSSLAYLKRLPLNQLKIDQSFVRDVLTDPNDAAIAETIVALGNILGLEVIAEG 780 Query: 1065 VVLPLVMDTLSGIGVDLIYGEVIADAQPL---DLLVNSSYFAIN 1105 V L+ +G G + PL + + N Sbjct: 781 VETDAQWRFLANVGCKNYQGYLFGRPLPLLEFEQFLQGCDAGAN 824 Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 39/276 (14%), Positives = 96/276 (34%), Gaps = 8/276 (2%) Query: 277 LLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLG 336 ++ + + + + + + F ++ M + EGQ+L + + L Sbjct: 115 IVGLASVATDITDRKRQELELIALKNKFAATLQALPDLMFELDIEGQFLDCHAQQSKLLV 174 Query: 337 YSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSL 396 S ++ G T ++ P+ +Q + + + I+T S + + G L+V+ Sbjct: 175 GSPSDMVGKTVHEVLPPDVAAIFIQSLHEAMEQGISTGS-QFQLDLPEGSRR-FELSVAQ 232 Query: 397 VRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDK 456 +FI DI + K E ++ + + + W +L+ + Sbjct: 233 KASDGDHQPHFIVLSRDITDRKNAEHALRESESLMRAIVDNTPVEYWARDLEGRCIMENA 292 Query: 457 RMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHI 516 + E + + V P++ + + + E V R Sbjct: 293 LVVEHWG----SLLGKRPEDSGVSPDELA-VWQENNRRVYEGEVIEAEVEYQVGGQTRIF 347 Query: 517 RALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQ 552 + + +G+ ++G N D+T+ K+ E + + Sbjct: 348 NNVVAPIK-VDGQTIGIVGFNQDITDRKRNEEEIHR 382 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 31/251 (12%), Positives = 80/251 (31%), Gaps = 6/251 (2%) Query: 431 ITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKV 490 + ++ L ++ + P + E E + Sbjct: 15 HEALLDKLATPVFAKNLNGLYIYANEMAGIMLGRPAPEILGRKD-SELFASELAGRMQTC 73 Query: 491 IRDSLQSRSPFKLEFRI--TVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNE 548 L S E + G R + + +K+G++ L + D+T+ K+ Sbjct: 74 DDKLLASGESASCEIWLPDRGHGGERCYWLVRKVLRDKKGQIVGLASVATDITDRKRQEL 133 Query: 549 ALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITF 608 L K + TL ++ + + +D+ + + K+ + + +G + VL Sbjct: 134 ELIALKNKFAATLQALPDLMFELDIEGQFLDCHAQQSKLLVGSPSDMVGKTVHEVLPPDV 193 Query: 609 GDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDV 668 +++++ A + L G S+ ++ +++ +D+ Sbjct: 194 A--AIFIQSLHEAMEQGISTGSQFQLDLPEGSRR-FELSVAQKASDGDHQPHFIVLSRDI 250 Query: 669 TESRKMLRQLS 679 T+ + L Sbjct: 251 TDRKNAEHALR 261 Score = 93.2 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 32/238 (13%), Positives = 78/238 (32%), Gaps = 11/238 (4%) Query: 282 IMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEE 341 +++ + + + ESE+ R ++ + + EG+ + N + + G Sbjct: 245 VLSRDITDRKNAEHALRESESLMRAIVDNTPVEYWARDLEGRCIMENALVVEHWG----S 300 Query: 342 LRGLTFQQ-LTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHT 400 L G + P++L + ++ GE+ +E + G V+ ++ Sbjct: 301 LLGKRPEDSGVSPDELAVWQENNRRVYEGEVIEAEVEYQV---GGQTRIFNNVVAPIK-V 356 Query: 401 DGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFE 460 DG + + +DI + KR E+ +L +L + ++ + + R Sbjct: 357 DGQTIGIVGFNQDITDRKRNEEEIHRLAFYDSLTHLPNRRLMF--DRLEHALIGSARRKS 414 Query: 461 LYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRA 518 + N++ + E + L++ D I Sbjct: 415 HGALLLIDLDNFKFLNDTHGHEVGDELLLEVAKRLKTCIRQGDTAARLGGDEFVVILE 472 >UniRef50_C1DD31 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DD31_LARHH Length = 910 Score = 852 bits (2202), Expect = 0.0, Method: Composition-based stats. Identities = 153/810 (18%), Positives = 310/810 (38%), Gaps = 31/810 (3%) Query: 301 ETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDL 360 E FR E+ G+ + G+ + N+ +G S+E + GL + + Sbjct: 101 EDRFRYCFEHLPFGLLVFDQTGRVMVCNRHFDTMMGLSEEAVHGLDLTAM----PVPGFS 156 Query: 361 QQVEKLISGEINTYSMEKRYYNRNGDVVWALLAV--SLVRHTDGTPLYFIAQIEDINELK 418 + V + ++G++ + E G + + +R G +A +ED + Sbjct: 157 RAVRQALAGDVGHFFGEIPVA---GGTRQLGVRAVFAPLRTPSGQVPRGVAILEDALDNP 213 Query: 419 RTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYEC 478 R + R L + + EW+ + W++ ++ ++ Sbjct: 214 RWQDELLAGRRRRQLFLDQSVLAAIEWDDGFCVQEWNRAAERMFGFSREEAIGQHAFF-I 272 Query: 479 VLPEDRQHAEKVIRDSL--QSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGI 536 + E R ++ + SL Q + T + +++ G+ + + Sbjct: 273 LPSEVRATLDREVLQSLMRQEGGWHSVNVNQTRDGALIQCEWFNTTLVDSNGKSLGVTSL 332 Query: 537 NMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEAL 596 +D+TE + + L + E ++ D +I +N +++G+TQ E + Sbjct: 333 VLDITEKQAREDEL----RVAAQVYEQSREGILITDAQHRIVMLNSRCCELTGYTQGEVV 388 Query: 597 GVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDG 656 G + + +E + + +++L R+G + ++ + G Sbjct: 389 GTTPEWMFSESQVSTPGFVE-LCRHLDEQGGWAGELLLRQRNGQLFLAWLTLRTVR--LG 445 Query: 657 SNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVN-STHQRHA 715 ++ V + D+++ + R++ Y A D LT L NRA + + L+ V A Sbjct: 446 TSTYHVCMFGDLSDRQAAERRIQYLAYFDTLTGLPNRALLTDRANMALRGVEGDAAPALA 505 Query: 716 LVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE 775 L+ +D+D FK +ND+ GH+ GD LL+ +A + + +R D ++R GGDEF +LLPD N Sbjct: 506 LLLLDIDHFKHINDTLGHSTGDQLLQSVAKRLQATVREGDTVSRQGGDEFVVLLPDANAS 565 Query: 776 SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNG 835 A +A I+ + + V S GI + D+ A + A+IA Y +K Sbjct: 566 RAASVAQEILRRLG-FVCRIGEHDISVSVSIGIAMAPDDGTDFATLSKCAEIAMYRAKQE 624 Query: 836 GRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLK 895 GR + + P+ + ++ ++ + + + +L Sbjct: 625 GRNTLRFFFPEMQERTLRHVQL-TGALRGAVERGEMQLHYQPQVDLQ--TGELSGVEALL 681 Query: 896 LWSCEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV--ASKGISISLPLSVA 952 W+ + F + L + V +Q A + + +++ LSV Sbjct: 682 RWTHPLFGAVSPGEFIPLAEESGLIIPIGDWVLRTAARQLADWLRDGLPPMVMAVNLSVL 741 Query: 953 GLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLSQV 1008 + L + L + +PP L + + + E ++ +L G ++ L Sbjct: 742 QFNLPGLAQQIASILSEAGVPPALFEVELTESMAMTEPEAAIATIDELHSVGVQVSLDDF 801 Query: 1009 GRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLP 1068 G LK D L +DG + + D ++ I G A+ LG+ T+A V Sbjct: 802 GTGYSSLAYLKRFRLDRLKIDGSFVRDADSDPEDRAIVDAIVGMAESLGLATVAEGVETS 861 Query: 1069 LVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 ++ + +G D + G I+ P LV Sbjct: 862 GQLEVIRALGGDAVQGYWISRPLPAAGLVA 891 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 36/330 (10%), Positives = 94/330 (28%), Gaps = 5/330 (1%) Query: 222 LLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPAN 281 L +A+ +P + + + P + Sbjct: 144 GLDLTAMPVPGFSRAVRQALAGDVGHFFGEIPVAGGTRQLGVRAVFAPLRTPSGQVPRGV 203 Query: 282 IMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEE 341 + + + + ++ S + + N+A + G+S+EE Sbjct: 204 AILEDALDNPRWQDELLAGRRRRQLFLDQSVLAAIEWDDGFCVQEWNRAAERMFGFSREE 263 Query: 342 LRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTD 401 G + E ++V + + + + R+G ++ + + ++ Sbjct: 264 AIGQHAFFILPSEVRATLDREVLQSLMRQEGGWHSVNVNQTRDGALIQCEWFNTTLVDSN 323 Query: 402 GTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFEL 461 G L + + DI E + E + + E GI + + I + R EL Sbjct: 324 GKSLGVTSLVLDITEKQAREDELRVAAQ----VYEQSREGILITDAQHRIVMLNSRCCEL 379 Query: 462 YEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALAN 521 + + + L + + E + ++G + L Sbjct: 380 TGYTQGEVVGTTPEWMFSESQVSTPGFVELCRHLDEQGGWAGELLLRQRNGQLFLAWLTL 439 Query: 522 RVLNKEGEVERLLGINMDMTEVKQLNEALF 551 R + G + + D+++ + + Sbjct: 440 RTVRL-GTSTYHVCMFGDLSDRQAAERRIQ 468 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 56/370 (15%), Positives = 112/370 (30%), Gaps = 36/370 (9%) Query: 313 IGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEIN 372 G+ + G+ L N A + RG D Q +S Sbjct: 11 NGVWWLAASGEVLHANDAAARLT-------RGCY--------DHPAFGQLANMHLSS--G 53 Query: 373 TYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERIT 432 + + G + V + D V +R Sbjct: 54 SERLAWMLPQAGGGEQTVWVQVDRLPDGSLMVHQLGTTSLD--------PVYCINEDRFR 105 Query: 433 LANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIR 492 E G+ ++ + ++ + + + V + +R Sbjct: 106 YCFEHLPFGLLVFDQTGRVMVCNRHFDTMMGLSEEAVHGLDLTAMPVP-----GFSRAVR 160 Query: 493 DSLQSR-SPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALF 551 +L F E + +RA+ + G+V R + I D + + + L Sbjct: 161 QALAGDVGHFFGEIPVAGGTRQLGVRAVFAPLRTPSGQVPRGVAILEDALDNPRWQDELL 220 Query: 552 QEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGD- 610 + R + LD A + D + N AE+M G+++EEA+G +L Sbjct: 221 AGRRRRQLFLDQSVLAAIEWDDGFCVQEWNRAAERMFGFSREEAIGQHAFFILPSEVRAT 280 Query: 611 -NGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVT 669 + +++++ V R G + T L +G ++G ++ D+T Sbjct: 281 LDREVLQSL---MRQEGGWHSVNVNQTRDGALIQCEWFNTTLVDSNGKSLGVTSLVLDIT 337 Query: 670 ESRKMLRQLS 679 E + +L Sbjct: 338 EKQAREDELR 347 >UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z192_9NEIS Length = 943 Score = 851 bits (2200), Expect = 0.0, Method: Composition-based stats. Identities = 147/732 (20%), Positives = 278/732 (37%), Gaps = 27/732 (3%) Query: 382 NRN--GDV--VWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEA 437 ++ G + L R D +A DI + E ++ + + Sbjct: 208 RKDEIGRLGRHLEWTRAELKRLIDELRAKTLALESDIARRREVEDALRRSENKYRELFWS 267 Query: 438 GGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQS 497 GI L + + L Q ++ + PE + E+ D+ Sbjct: 268 NLDGIVISSLDGQVIDANPAFLNLMCYSLDQLK-LQNFWSLIAPES-EGMERFNLDNKVL 325 Query: 498 RSPFKLEFR---ITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEK 554 R + EF I + + + + G + + + D++E + E + Sbjct: 326 RFGYCDEFEASYINRFGNVVPVSVKTVAMRDSFGRINAVWRMVRDISEKRVAEERM---- 381 Query: 555 ERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPL 614 + ++ E ++ D +I +N +++G+ Q+E LG + + + Sbjct: 382 QLAAKVFENTVEGIMITDADKRIRSVNRAFSQITGFGQQEVLGQKPDML--SSGRHDETF 439 Query: 615 MENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKM 674 E ++SA + + ++ ++G Y +I+ + G V + D++E + Sbjct: 440 YEAMWSAINEHGSWQGELWNRRKNGEVYPEWLAISAVRNAVGEITHYVAIFSDLSERKAA 499 Query: 675 LRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHA 734 ++ + A D LT L NRA + ++ + +Q ++R AL+ +DLDRFK +N+S GH+ Sbjct: 500 DERIQFLAHFDVLTGLPNRAHIQDRVELAIQNATRDNERLALLLLDLDRFKTINESLGHS 559 Query: 735 AGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHF 793 AGDALL+ LA + S L + +V+AR GGDEF +LLP + SA A RI + + Sbjct: 560 AGDALLQVLAERIRSTLLTGEVVARQGGDEFIVLLPLIADPGSAALAAERIREVL-EPPV 618 Query: 794 IWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSE 853 + S GI++ D+ ++ AD A Y +K+ GR Y A E Sbjct: 619 ELFNHSISITPSIGISVFPDDGRDFETLVRNADAAMYHAKSAGRNSYKFYTADLNARARE 678 Query: 854 RAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRS 912 + ++ + ++ ++ + + +L W E ++ F Sbjct: 679 ILEIESQLRY-ALDRDEFVLHYQPQVDLK--TGEIIGAEALIRWQHPELGLLGPVRFIEV 735 Query: 913 FSDPALSHALDRRVFHEFFQQAAKA--VASKGISISLPLSVAGLSSATLVNDLLEQLENS 970 + + V E +Q A+ IS+++ LS L L L Sbjct: 736 AEERGFIVQIGNWVIQEACRQLAQWRRQGLPRISLAVNLSTLQFRQQDLAVHLQRALSAH 795 Query: 971 PLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYL 1026 L L + + I+D E ++ +++ G ++ + G + LK AD L Sbjct: 796 GLVGSDLDVEVTESVIMDDVETTIHTIDRIKSMGLQLSIDDFGTGYSSLSYLKRFKADKL 855 Query: 1027 LLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEV 1086 +D ++ + D + I A+ L M IA V L G G + Sbjct: 856 KIDRSFVRDIPMDADDSAIARAIINMAKNLNMTVIAEGVETIEQWKFLDREGCHAAQGYL 915 Query: 1087 IADAQPLDLLVN 1098 +A P Sbjct: 916 LAKPVPAKEFER 927 Score = 151 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 98/272 (36%), Gaps = 6/272 (2%) Query: 281 NIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQE 340 + + R + SE +R + G+ + +GQ + N A + YS + Sbjct: 238 LALESDIARRREVEDALRRSENKYRELFWSNLDGIVISSLDGQVIDANPAFLNLMCYSLD 297 Query: 341 ELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHT 400 +L+ F L PE + ++ + E Y NR G+VV + +R + Sbjct: 298 QLKLQNFWSLIAPESEGMERFNLDNKVLRFGYCDEFEASYINRFGNVVPVSVKTVAMRDS 357 Query: 401 DGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFE 460 G + DI+E + E+ Q + E GI + I S ++ + Sbjct: 358 FGRINAVWRMVRDISEKRVAEERMQLAAK----VFENTVEGIMITDADKRIRSVNRAFSQ 413 Query: 461 LYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA 520 + + D + + + ++ ++ E K+G + LA Sbjct: 414 ITGFGQQEVLGQKPDMLSSGRHD-ETFYEAMWSAINEHGSWQGELWNRRKNGEVYPEWLA 472 Query: 521 -NRVLNKEGEVERLLGINMDMTEVKQLNEALF 551 + V N GE+ + I D++E K +E + Sbjct: 473 ISAVRNAVGEITHYVAIFSDLSERKAADERIQ 504 >UniRef50_Q47X88 Sensory box sensor/GGDEF/EAL domain protein n=2 Tax=Colwellia psychrerythraea 34H RepID=Q47X88_COLP3 Length = 1086 Score = 850 bits (2198), Expect = 0.0, Method: Composition-based stats. Identities = 161/703 (22%), Positives = 281/703 (39%), Gaps = 21/703 (2%) Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP 466 + E + +++ R+ + IGIW + +K L I Sbjct: 375 ALGFNEMATSFQNLMIDKEEISSRLRAIIDNSPIGIWFTGIDGRYHFVNKTFCNLAGIKE 434 Query: 467 HIKPNW--QVWYECVLPEDRQHAEKVIRDSLQSRSPF-KLEFRITVKDGIRHIRALANRV 523 N E + E H + +L SP E + ++ Sbjct: 435 EDMLNTPSSNLAELLGDEIAHHCLDSDKAALAQDSPHVSFETIPRSNAKPYILEITKVKL 494 Query: 524 LNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPV 583 N +GEV L+GI+ D+T +Q E L + I + EA++ D +I +NP Sbjct: 495 KNAQGEVVGLIGISKDITNKRQQEEDL----KLADIVYQNSSEAMMITDSKNEIIAINPA 550 Query: 584 AEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYD 643 +++G++ E +G + N + ++ + ++ ++G Y Sbjct: 551 LSEITGYSSSELIGKNPNVF--SSGKQNPEFYQLMWEEIKLTGTWQGEIWNTKKNGKEYP 608 Query: 644 VHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRIL 703 SI+ + G+ + + D+TE +K + A +D+LT+L NR F +L Sbjct: 609 EWLSISTIYDDYGNVFRRIALFSDITEKKKKDALILRQAKYDSLTNLPNRIMFIDRLEQE 668 Query: 704 LQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGD 763 ++ + +Q+ AL+FIDLD FK +ND+ GH GDALL E + +R D +ARLGGD Sbjct: 669 IKVSHRKNQKFALIFIDLDNFKKINDTRGHVYGDALLIEAGKRITHCIREVDTVARLGGD 728 Query: 764 EFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVM 822 EF +LL D ++ + I +++ +++ FI + + AS G+T+ ++ E++ Sbjct: 729 EFTILLSDIADIHNVESICQKVLQTLSEPFFISKMYT-YISASLGVTIYPNDASSTLELL 787 Query: 823 SQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPR 882 AD A Y +KN GR R + + + D + + I NQL + + Sbjct: 788 KNADQAMYLAKNLGRNRFCYFTASMQEEALDHLELINDLR-KAISLNQLEVFYQPIV--E 844 Query: 883 IPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAA--KAVA 939 + +L W ++ F + L + VF + Q K Sbjct: 845 LQTGVIRKAEALLRWKHPVRGMVSPAEFIPLAEESGLIIEIGDWVFKQTVQHINTCKDQL 904 Query: 940 SKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH----AESVQK 995 I IS+ S + D L L + LP + + I ++++ E + K Sbjct: 905 GLDIQISVNKSPVQFRESIDQLDWLAYLAENQLPGENIVIEITEGLLMNNNTSTMERLSK 964 Query: 996 LRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQR 1055 R AG + + G + LK DYL +D N+ D +L I AQ+ Sbjct: 965 FRSAGIGLSMDDFGTGYSSLSYLKKFALDYLKIDQSFTRNIAPGSEDMILSEAIITMAQK 1024 Query: 1056 LGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 LG+K IA + M+ L G G D G + P + + Sbjct: 1025 LGLKVIAEGIETKEQMELLIGAGCDYGQGYYFSRPIPAEDFLQ 1067 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 45/283 (15%), Positives = 104/283 (36%), Gaps = 18/283 (6%) Query: 298 SESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGL---TFQQLTWPE 354 E + R ++ S IG+ G +G++ NK C G +E++ +L E Sbjct: 393 EEISSRLRAIIDNSPIGIWFTGIDGRYHFVNKTFCNLAGIKEEDMLNTPSSNLAELLGDE 452 Query: 355 DLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDI 414 + L + ++ + S E N + +++ G + I +DI Sbjct: 453 IAHHCLDSDKAALAQDSPHVSFE-TIPRSNAKPYILEITKVKLKNAQGEVVGLIGISKDI 511 Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQV 474 ++ E+ + + + + + K I + + + E+ Sbjct: 512 TNKRQQEEDLKLA----DIVYQNSSEAMMITDSKNEIIAINPALSEITGYSSSELIGKNP 567 Query: 475 WYECV---LPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA-NRVLNKEGEV 530 PE +++ + ++ ++ E T K+G + L+ + + + G V Sbjct: 568 NVFSSGKQNPE----FYQLMWEEIKLTGTWQGEIWNTKKNGKEYPEWLSISTIYDDYGNV 623 Query: 531 ERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDM 573 R + + D+TE K+ +AL + + L ++ ++ ID Sbjct: 624 FRRIALFSDITEKKK-KDALILRQAKYDS-LTNLPNRIMFIDR 664 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 40/241 (16%), Positives = 88/241 (36%), Gaps = 11/241 (4%) Query: 277 LLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLG 336 ++ ++ + R + + + ++ ++ S+ M + ++ + + N AL + G Sbjct: 501 VVGLIGISKDITNKRQQEEDLKLADIVYQ----NSSEAMMITDSKNEIIAINPALSEITG 556 Query: 337 YSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSL 396 YS EL G + + + Q + + I T+ E +NG L++S Sbjct: 557 YSSSELIGKNPNVFSSGKQNPEFYQLMWEEIK-LTGTWQGEIWNTKKNGKEYPEWLSIST 615 Query: 397 VRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSW-- 454 + G IA DI E K+ + + + + +L N I + + S Sbjct: 616 IYDDYGNVFRRIALFSDITEKKKKDALILRQAKYDSLTNLPNRIMFIDRLEQEIKVSHRK 675 Query: 455 DKRMFELY----EIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVK 510 +++ ++ V+ + +L E + IR+ EF I + Sbjct: 676 NQKFALIFIDLDNFKKINDTRGHVYGDALLIEAGKRITHCIREVDTVARLGGDEFTILLS 735 Query: 511 D 511 D Sbjct: 736 D 736 >UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AX01_9CHRO Length = 1409 Score = 850 bits (2197), Expect = 0.0, Method: Composition-based stats. Identities = 176/835 (21%), Positives = 332/835 (39%), Gaps = 31/835 (3%) Query: 278 LPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGY 337 L + + ++++ + + + +E + +A L N+ + G+ Sbjct: 587 LKILGTHRDITETKQTQENLRQQQELLKTIVEQIPVMLAYFDQHYNLLWVNREWEKIWGW 646 Query: 338 SQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLV 397 S E + PE ++ Q V I + + + R+G ++ + V Sbjct: 647 SLENRQKGDLLAEFEPE--SEYRQSVLNYIKSAQGKWR-DFKILVRDGRIIDTSW--ANV 701 Query: 398 RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELK-PNIFSWDK 456 + +DGT IA +DI E KR E++ ++ E+ L +A +W ++L+ ++ Sbjct: 702 KLSDGTS---IAIGQDITERKRIEEILRESEEKYRLFFDANPNPLWVYDLETFAFLEVNQ 758 Query: 457 RMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHI 516 E Y + + PED E+ I + ++R +G Sbjct: 759 ATIEHYGYTREEFLAMTI-RDIRPPEDVPLLEQYILQ-INPHFNRSGQWRHRKANGEIID 816 Query: 517 RALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMK 576 + + L G RL+ + D+TE + +AL + KER H + ++ + Sbjct: 817 VEITSHGLEYAGRKARLV-LAHDITERLKAEKALQESKERFHRAIVDAPLPILIHAEDGE 875 Query: 577 ITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTS--RSAIEQDVVL 634 I +N ++SG+ +E + +G+ ++ ++ E + + Sbjct: 876 IVQVNHAWTELSGYHLDEL--STIADWTEKAYGERKDIVRSVIDQLYEIDGKVEEGEFAI 933 Query: 635 HCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRA 694 +SG + +S PL L + + D+TE ++ QL +S HD LT L NR Sbjct: 934 TIKSGETRIWDFSSAPLGKLADGRRLIISMAIDITERKQAEEQLRHSVLHDGLTGLPNRT 993 Query: 695 SFEKQLRILLQTVNST-HQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRS 753 ++ ++ + A++FIDLDRFK VNDS GH GD LL+ +A + +R Sbjct: 994 LLLDRVEQAIKRKQQQPNYLFAILFIDLDRFKVVNDSLGHLVGDQLLKTIADKLQRCVRP 1053 Query: 754 SDVLARLGGDEFGLLLPDCNV-ESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLID 812 +D +AR GGDEF +LL D + A +A RI + F + + + AS GIT Sbjct: 1054 TDTVARFGGDEFVILLEDLTIWTDATKMAQRITEEF-ESSFTLQEQEYFTSASIGITFCS 1112 Query: 813 DNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLM 872 +E++ ADIA Y SK GR R T+++P ++ + + + ++ + + Sbjct: 1113 SPEQTPSELVRNADIAMYRSKEAGRARYTMFDPIMHTQATQLLELETNLRL-ALEREEFI 1171 Query: 873 MLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFF 931 + + S L +L W E +I F + L L V E Sbjct: 1172 VYYQPIVSLMNRN--LLGFEALVRWIHPEKGVISPANFIPVAEETGLIIPLGEWVLRESC 1229 Query: 932 QQAAKAV----ASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAIL 987 +Q ++ + +S+ LS L L+N + L + L + L L I ++ Sbjct: 1230 RQMKAWQEQFIGAENLRVSVNLSGKQLQQPNLINRIDNILTETGLEGKNLKLEITESMLM 1289 Query: 988 DHAESVQKL----RLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDE 1043 ++ E V +L + ++ + G + L D L +D + + + Sbjct: 1290 NNKEQVSELLLQMKAKKIQVSIDDFGTGYSSLSYLHYLPVDTLKIDRSFVSRMSQVGENF 1349 Query: 1044 MLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 ++ I A L M +A V + L +G + G + + +V+ Sbjct: 1350 EIVEAIITLAHHLQMDVVAEGVETEQHLRQLQQLGCEFGQGYFFSKPLESEKIVS 1404 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 91/466 (19%), Positives = 167/466 (35%), Gaps = 60/466 (12%) Query: 264 LMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQ 323 LMS + LL+ L I Y + + SE+ +R +E + + G Sbjct: 271 LMSGLLITTILLMSLWRYISLRPFYRLQQIEAALRASESRYRGIVEDQSEFICRYRPGGT 330 Query: 324 WLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNR 383 N+A C++ + + TF L + ED + Q + ++ E + E R Sbjct: 331 LTFVNQAYCRYFQKTPAAVLDNTFWDLIYSEDQPQVAQNIAS-LTPENPMITHEHRVRLS 389 Query: 384 NGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQ----------------- 426 +G++ W ++ + F A DI +LK+ E +Q Sbjct: 390 SGEIRWNQWTNRVIMDEKRNIIEFQAVGRDITQLKQVEAALRQLNEELEQRVEQRTAELA 449 Query: 427 -----------------------------LMERITLANEAGGIGIWEWELKPNIFSWDKR 457 ER+ LA E G IWEW L D Sbjct: 450 AEIRERQEIETALIKSQAKYEQLVEKLSKSEERLQLALEGSGDTIWEWNLGTGELYCDPN 509 Query: 458 MFELYEI-PPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPF-KLEFRITVKDGIR- 514 P N + W + PE E + + L ++ + LE++I +G Sbjct: 510 WIRRLGYDPREEAINIEWWRSKIDPETLSDHEAALENYLNGKTEYLALEYKIQTLEGEWL 569 Query: 515 HIRALANRV-LNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDM 573 I + +++ + ++LG + D+TE KQ E L Q++E L ++ I + D Sbjct: 570 WIGGRGKCIAYDQQRKPLKILGTHRDITETKQTQENLRQQQELLKTIVEQIPVMLAYFDQ 629 Query: 574 AMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVV 633 + ++N EK+ GW+ E +L ++ + +++ + Sbjct: 630 HYNLLWVNREWEKIWGWSLE---NRQKGDLLAEFEPESEYRQSVLNYIKSAQGKWRDFKI 686 Query: 634 LHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLS 679 L G + S + DG+ S+ + QD+TE +++ L Sbjct: 687 LVR-DGRI--IDTSWANVKLSDGT---SIAIGQDITERKRIEEILR 726 Score = 195 bits (497), Expect = 7e-48, Method: Composition-based stats. Identities = 75/397 (18%), Positives = 151/397 (38%), Gaps = 18/397 (4%) Query: 288 YAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGY-SQEELRG-L 345 + + +S+SE + A+E S + L + + LGY +EE Sbjct: 467 AKYEQLVEKLSKSEERLQLALEGSGDTIWEWNLGTGELYCDPNWIRRLGYDPREEAINIE 526 Query: 346 TFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLV-RHTDGTP 404 ++ PE L+ +E ++G+ ++E + G+ +W + P Sbjct: 527 WWRSKIDPETLSDHEAALENYLNGKTEYLALEYKIQTLEGEWLWIGGRGKCIAYDQQRKP 586 Query: 405 LYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI 464 L + DI E K+T++ +Q E + E + + ++ N+ ++ +++ Sbjct: 587 LKILGTHRDITETKQTQENLRQQQELLKTIVEQIPVMLAYFDQHYNLLWVNREWEKIWGW 646 Query: 465 PPHIKPNWQVWYECVLP-EDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRV 523 + + E E RQ I+ + + ++ +F+I V+DG R I V Sbjct: 647 SLENRQKGDLLAEFEPESEYRQSVLNYIKSA---QGKWR-DFKILVRDG-RIIDTSWANV 701 Query: 524 LNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMA-MKITFMNP 582 +G + I D+TE K++ E L + +E+ + D+ + D+ +N Sbjct: 702 KLSDGTS---IAIGQDITERKRIEEILRESEEKYRLFFDANPNPLWVYDLETFAFLEVNQ 758 Query: 583 VAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSY 642 + G+T+EE L + + + ++ PL+E +G Sbjct: 759 ATIEHYGYTREEFLAMTIRDIRPP---EDVPLLEQYILQINPHFNRSGQWRHRKANGEII 815 Query: 643 DVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLS 679 DV + L G V + D+TE K + L Sbjct: 816 DVEITSHGL-EYAGRKARLV-LAHDITERLKAEKALQ 850 Score = 159 bits (403), Expect = 6e-37, Method: Composition-based stats. Identities = 57/290 (19%), Positives = 107/290 (36%), Gaps = 9/290 (3%) Query: 268 MPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTE-GQWLQ 326 W L + + + + + + ESE +R + + + + E +L+ Sbjct: 696 TSWANVKLSDGTSIAIGQDITERKRIEEILRESEEKYRLFFDANPNPLWVYDLETFAFLE 755 Query: 327 TNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGD 386 N+A + GY++EE +T + + PED+ Q + ++ S + R+ NG+ Sbjct: 756 VNQATIEHYGYTREEFLAMTIRDIRPPEDVPLLEQYILQI--NPHFNRSGQWRHRKANGE 813 Query: 387 VVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWE 446 ++ + + + +A DI E + E+ Q+ ER A + I Sbjct: 814 IIDVEITSHGLEYAGRKARLVLA--HDITERLKAEKALQESKERFHRAIVDAPLPILIHA 871 Query: 447 LKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQ-SRSPFKLEF 505 I + EL W E E + VI + + EF Sbjct: 872 EDGEIVQVNHAWTELSGYHLDELSTIADWTEKAYGERKDIVRSVIDQLYEIDGKVEEGEF 931 Query: 506 RITVKDGIRHIRALANRVL--NKEGEVERLLGINMDMTEVKQLNEALFQE 553 IT+K G I ++ L +G ++ + +D+TE KQ E L Sbjct: 932 AITIKSGETRIWDFSSAPLGKLADGRRL-IISMAIDITERKQAEEQLRHS 980 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 50/446 (11%), Positives = 133/446 (29%), Gaps = 81/446 (18%) Query: 295 KHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPE 354 + SE+ + + + + + LG E++ + + + Sbjct: 186 DALIYSESVLKEIVAQA-------DVSNRI--------KILGEPLAEIK----RAIALRK 226 Query: 355 DLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDG---TPLYFIAQI 411 D L +++K ++ + + E+ Y G+ L G T + ++ Sbjct: 227 DNLLLLTRLDKAVNSFVGSPKYEQIYRKWYGEPENFWTVGRLFWLMSGLLITTILLMSLW 286 Query: 412 EDINEL-----KRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP 466 I+ ++ E + R E I + + ++ ++ P Sbjct: 287 RYISLRPFYRLQQIEAALRASESRYRGIVEDQSEFICRYRPGGTLTFVNQAYCRYFQKTP 346 Query: 467 HIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVK-DGIRHIRALANRVLN 525 + +++ + ED+ + I E R+ + IR + +++ Sbjct: 347 AAVLD-NTFWDLIYSEDQPQVAQNIASLTPENPMITHEHRVRLSSGEIRWNQWTNRVIMD 405 Query: 526 KEGEVERLLGINMDMTEVKQLNEALFQ--------------------------------- 552 ++ + + D+T++KQ+ AL Q Sbjct: 406 EKRNIIEFQAVGRDITQLKQVEAALRQLNEELEQRVEQRTAELAAEIRERQEIETALIKS 465 Query: 553 -------------EKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWT-QEEALGV 598 +ERL + L+ G+ + ++ + +P + G+ +EEA+ Sbjct: 466 QAKYEQLVEKLSKSEERLQLALEGSGDTIWEWNLGTGELYCDPNWIRRLGYDPREEAI-- 523 Query: 599 PLLTVLHITFGDNGPLMENIYSADTSR--SAIEQDVVLHCRSGGSYDVHYSITPL-STLD 655 + + E + + + + G + + Sbjct: 524 NIEWWRSKIDPETLSDHEAALENYLNGKTEYLALEYKIQTLEGEWLWIGGRGKCIAYDQQ 583 Query: 656 GSNIGSVLVIQDVTESRKMLRQLSYS 681 + + +D+TE+++ L Sbjct: 584 RKPLKILGTHRDITETKQTQENLRQQ 609 >UniRef50_A0LD38 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD38_MAGSM Length = 834 Score = 850 bits (2196), Expect = 0.0, Method: Composition-based stats. Identities = 163/835 (19%), Positives = 290/835 (34%), Gaps = 85/835 (10%) Query: 276 ILLPANIMTMVMYAFRAER-KHISES-ETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQ 333 I L + R E+ K + ES F + G L+ G L+ N + Sbjct: 44 IELEIQNQELRESQLRLEKAKQVQESALARFEALFNSAPEGFILIDVSGMVLECNHTTLE 103 Query: 334 FLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLA 393 LG +E+L F ED K +E R ++ Sbjct: 104 MLGCKREDLIRKPFSAFVHIEDQPKFYASYPSFFKSTYPK-PIEIRLIHK---------- 152 Query: 394 VSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFS 453 S +H D + E G + +L +++ Sbjct: 153 GSAFKHKD-----------------------------HSFIAELTGCSTLKQDLFKDLYH 183 Query: 454 WDKR-MFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG 512 + + +Y I H ++ D + A ++ +L Sbjct: 184 DNPFILVSIYNINAHKLLEREL-------ADAKQAAELANHAL----------------- 219 Query: 513 IRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCID 572 + + L N + + E ++ EA++ D Sbjct: 220 ---LESHDKLEATVAQRTAALKTSNEQLKQQMIEREQAQHRLRLTAGVFENTSEAIIITD 276 Query: 573 MAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDV 632 A ++ +NP +++G+ +E +G + + ++ + ++ Sbjct: 277 AANRVMEVNPAFVRITGYPADEVIGRDPGFMK--SHRHTHEFYAEMWKKIWQTGQWQGEI 334 Query: 633 VLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLAN 692 +G Y +I + G + + + D++ + +L A D LT L N Sbjct: 335 WDRRHNGEIYPKWLTINAVYDERGHLVNCIGIFSDISRLKATEERLEQLAFFDCLTKLPN 394 Query: 693 RASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLR 752 RA F+ +L L N + L+FIDLD FK +NDS GH AGD LL E A + S +R Sbjct: 395 RAHFQSRLDHALTAANRRQNKVGLIFIDLDHFKHINDSMGHNAGDQLLIEAAKRIQSCVR 454 Query: 753 SSDVLARLGGDEFGLLLPDCNVES--ARFIATRIISAVNDYHFIWEGRVHRVGASAGITL 810 D +AR+GGDEF ++L D + +A I+ + + + E + +G S G+ + Sbjct: 455 EEDTVARMGGDEFTIILADLTDTAKVMTNVALTILESFT-HPIVLEDKKLFIGCSLGMAI 513 Query: 811 IDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQ 870 D++ AA ++ AD A Y +K GR R + Y + A R ++ + ++ I Sbjct: 514 YPDDSGNAALLIKHADTAMYRAKESGRNRYSFYTAEMNAQAQSRISLESELRY-AIDHKA 572 Query: 871 LMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHE 929 + + + +L W +I F + L A+ +V Sbjct: 573 FELYYQPKVDAH--SSEIVGFEALLRWIHPTEGVISPNQFIPIAEESGLIAAIGNQVVEM 630 Query: 930 FFQQAAK--AVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAIL 987 Q + K + +++ LSV L LVN + L N + L L + + Sbjct: 631 ACQGLQRINRCTPKPLPVAINLSVRQLRQDNLVNYFSQTLANYGIEAEQLELEVTESFLA 690 Query: 988 DHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDE 1043 E +Q L G +I + G + LK L +D V N Sbjct: 691 KPIEKSAALLQALHQLGYKIAIDDFGTGYSSLSYLKNFPIHTLKIDRSFVMEVAHNQESR 750 Query: 1044 MLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 ++ I A LG +A V ++ L G+G ++ G A PL ++ Sbjct: 751 TIVQAIISMAHALGYDLVAEGVETAAQVNVLQGLGCGIMQGFHYARPAPLHEILE 805 Score = 55.8 bits (134), Expect = 9e-06, Method: Composition-based stats. Identities = 38/242 (15%), Positives = 78/242 (32%), Gaps = 34/242 (14%) Query: 482 EDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMT 541 E R+ AE+++ Q + + + I L + E + + L + + Sbjct: 8 ELRKRAEELMLRQEQIHTKWD------RDNVNALIHDLNVHQIELEIQNQELRESQLRLE 61 Query: 542 EVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLL 601 + KQ+ E+ R +S E + ID++ + N +M G +E+ + P Sbjct: 62 KAKQVQES---ALARFEALFNSAPEGFILIDVSGMVLECNHTTLEMLGCKREDLIRKPFS 118 Query: 602 TVLHITFGDNGPLMENIYSADTSRSAIEQDVVL-------HCRSGGSYDVHYSITPLSTL 654 +HI D + S S ++ L + + L Sbjct: 119 AFVHI--EDQPKFYASYPSFFKSTYPKPIEIRLIHKGSAFKHKDHSFIAELTGCSTLKQD 176 Query: 655 ------DGSNIGSVLVIQDVTESRKMLRQL--SYSASHDALTHLANRASF--EKQLRILL 704 + V + + + + R+L + A+ LAN A +L + Sbjct: 177 LFKDLYHDNPFILVSIYN-INAHKLLERELADAKQAA-----ELANHALLESHDKLEATV 230 Query: 705 QT 706 Sbjct: 231 AQ 232 >UniRef50_C1DB08 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DB08_LARHH Length = 1092 Score = 849 bits (2195), Expect = 0.0, Method: Composition-based stats. Identities = 173/818 (21%), Positives = 327/818 (39%), Gaps = 37/818 (4%) Query: 293 ERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTW 352 + H E++ + S+ MA + TEG + ALC L +E+RG ++L Sbjct: 282 RQLHAEEAQRRLEGIVAASSDAMAFIDTEGLVGFASPALCHLLSIGTQEVRGRQLEELLA 341 Query: 353 P-EDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 + + +Q +E ++G M+ G V + R+T+G + + + Sbjct: 342 AYANRRELMQGIEGALAGR--NLRMQTWLTLPGGGVRCLESSFDPYRNTEGQVVGAVCVL 399 Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPN 471 D+ + R + +Q A IG W ++ ++ ++ EL I + Sbjct: 400 RDMTDNARKTLLFEQAER-------AAQIGGWMLDIDADVLDLSQQARELLNIAADRQQV 452 Query: 472 WQVWYECVLPE----DRQHAEKVIRDSLQSRSP-FKLEFRITVKDGIRHIRALANRVLNK 526 E + R S + + + G+R AL+ R L Sbjct: 453 PLAEVMAQFDEATFKKAGRLLEAFRHSHSVATHEIHFDAVLVTPHGVRRRLALSARTLQV 512 Query: 527 EGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEK 586 G+ + G D+T +++ L + EAV D + +I +NP E Sbjct: 513 VGQGHYVTGSVQDVTSLRRAERELMLS----AQVFEHGSEAVFITDASHRILRVNPAFEA 568 Query: 587 MSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHY 646 ++G+ E LG+ + G G + + + ++V RSG Y Sbjct: 569 ITGYAAGEVLGLTPDFRCVSSPG--GTSISQRWELAEQTGRWQGEIVCRRRSGEHYYEWS 626 Query: 647 SITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQT 706 +++ + +GS + + D++ + + A D LT L NR+ +L+ +L Sbjct: 627 ALSVVRHANGSVLYFIGQFSDISAVKAAEARALRLACFDPLTGLPNRSLLFDRLQEVL-- 684 Query: 707 VNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFG 766 N A++F DLDRFK +NDS GH GDA+L+E+A +++ +R D + R GGDEF Sbjct: 685 -NREPHNGAVLFCDLDRFKNINDSLGHTLGDAVLKEVARRLVARVRPGDTVCRYGGDEFV 743 Query: 767 LLLPDCNVESA-RFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQA 825 L+LP + +A ++++ V+ + +G RV S G+ + + + ++ A Sbjct: 744 LVLPGLSDCVVLEQLAEQLLADVS-SPILLDGLDLRVTPSLGVAVFPRDGNDCDALLRHA 802 Query: 826 DIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPE 885 D A Y +K+ GR + + SE + + ++ + + Sbjct: 803 DAALYHAKSRGRNTYRFFTREIDDRVSEYLHIEHGLR-SALERGEFELHYQPQVDM--AF 859 Query: 886 ARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV--ASKG 942 R + + +L W E +I F + L + V E +QA + Sbjct: 860 GRVVGVEALLRWKHPEQGMISPVRFVPIAEETGLIVPIGMWVIREACRQAMLWRRAGLRP 919 Query: 943 ISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRL 998 +++++ LS S + ++ + E L +S L PR L + + I++ + ++ LR Sbjct: 920 MTMAVNLSGRQFSRS-VIEAIDEALADSGLDPRWLQVEVTESVIMEDTQEAYTVLEALRA 978 Query: 999 AGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGM 1058 G + + G LK D L +D ++ + + +++ I G A L + Sbjct: 979 RGLTVAVDDFGTGYSSLAYLKRFPIDKLKIDRSFIRDIDLDEDNPVIVDAIIGMAHNLRI 1038 Query: 1059 KTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 K +A V D L G D + G +++ QP L Sbjct: 1039 KVLAEGVETRAQWDYLRQQGCDEVQGYLVSRPQPAAAL 1076 Score = 162 bits (410), Expect = 8e-38, Method: Composition-based stats. Identities = 69/383 (18%), Positives = 142/383 (37%), Gaps = 18/383 (4%) Query: 302 THFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT----FQQLT-WPEDL 356 ++R A+ + G+ V G + N + + EL +T ++ LT E L Sbjct: 32 EYYRTALAHLNEGVLFVSPSGCMVPGNPEAVRIIAVPSAELSHVTREGEWETLTENGEPL 91 Query: 357 N-KDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRH-TDGTPLYFIAQIEDI 414 D +GE + +V W + + V P+ + DI Sbjct: 92 AMADRPGARACFAGETVERQVVGMRRPGAAEVQWLRMNAAPVYQPEQQEPVGAVVTFVDI 151 Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQV 474 ++ ++ Q++ R E G +++++ ++ + ++Q Sbjct: 152 TRERQRQESLQRMEARWQALFETSGDVAYDFDVATRRLELAPAWMQMLGLGRMPDDHYQD 211 Query: 475 WYECVLPEDRQHAEKVIRDSLQSRSP-FKLEFRITVKDGIR--HIRALANRVLNKEGEVE 531 W E V P+ R E + LQ + + +E+ + + G + +G+ Sbjct: 212 WLERVDPQVRDDVEAALCAHLQGETADYSVEYPLLHESGDWLHVFERGRVYQRDADGKPL 271 Query: 532 RLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWT 591 R+ G+ +D++ EA + RL + + +A+ ID + F +P + Sbjct: 272 RMHGVIIDLSRQLHAEEA----QRRLEGIVAASSDAMAFIDTEGLVGFASPALCHLLSIG 327 Query: 592 QEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPL 651 +E G L +L + + LM+ I A + L GG + S P Sbjct: 328 TQEVRGRQLEELLAA-YANRRELMQGIEGALA-GRNLRMQTWLTLPGGGVRCLESSFDPY 385 Query: 652 STLDGSNIGSVLVIQDVTE--SR 672 +G +G+V V++D+T+ + Sbjct: 386 RNTEGQVVGAVCVLRDMTDNARK 408 Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 68/435 (15%), Positives = 143/435 (32%), Gaps = 26/435 (5%) Query: 254 PSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAI 313 P + + + P + A + + + R ++ + E ++ E S Sbjct: 118 PGAAEVQWLRMNAAPVYQPEQQEPVGAVVTFVDITRERQRQESLQRMEARWQALFETSGD 177 Query: 314 GMALVGTEGQWLQTNKALCQFLGYSQ-EELRGLTFQQLTWPEDLNKDLQQVEKLISGEIN 372 + L+ A Q LG + + + + P+ + + + GE Sbjct: 178 VAYDFDVATRRLELAPAWMQMLGLGRMPDDHYQDWLERVDPQVRDDVEAALCAHLQGETA 237 Query: 373 TYSMEKRYYNRNGDVVWALLAVSLV-RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERI 431 YS+E + +GD + + R DG PL I D++ E+ + R+ Sbjct: 238 DYSVEYPLLHESGDWLHVFERGRVYQRDADGKPLRMHGVIIDLSRQLHAEEAQR----RL 293 Query: 432 TLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVI 491 A + + + + + L I Q+ +R+ + I Sbjct: 294 EGIVAASSDAMAFIDTEGLVGFASPALCHLLSIGTQEVRGRQLEELLAAYANRRELMQGI 353 Query: 492 RDSLQSRSPFKLEFRITVK-DGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEAL 550 +L +++ +T+ G+R + + + N EG+V + + DMT+ + L Sbjct: 354 EGALA-GRNLRMQTWLTLPGGGVRCLESSFDPYRNTEGQVVGAVCVLRDMTDNAR-KTLL 411 Query: 551 FQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQE-------EALGVPLLTV 603 F++ ER +D+ + ++ A ++ + E + Sbjct: 412 FEQAERAAQI------GGWMLDIDADVLDLSQQARELLNIAADRQQVPLAEVMAQFDEAT 465 Query: 604 LHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVL 663 + + + I D VL G + S L + G Sbjct: 466 FKKAGRLLEAFRHS--HSVATH-EIHFDAVLVTPHGVRRRLALSARTLQVV-GQGHYVTG 521 Query: 664 VIQDVTESRKMLRQL 678 +QDVT R+ R+L Sbjct: 522 SVQDVTSLRRAEREL 536 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 93/262 (35%), Gaps = 10/262 (3%) Query: 285 MVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRG 344 + + R + + S E+ + + + + L+ N A GY+ E+ G Sbjct: 524 QDVTSLRRAERELMLS----AQVFEHGSEAVFITDASHRILRVNPAFEAITGYAAGEVLG 579 Query: 345 LTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTP 404 LT + Q + ++ + + E R+G+ + A+S+VRH +G+ Sbjct: 580 LTPDFRCVSSPGGTSISQRWE-LAEQTGRWQGEIVCRRRSGEHYYEWSALSVVRHANGSV 638 Query: 405 LYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWE-WELKPNIFSWDKR--MFEL 461 LYFI Q DI+ +K E +L L +++ + N + +L Sbjct: 639 LYFIGQFSDISAVKAAEARALRLACFDPLTGLPNRSLLFDRLQEVLNREPHNGAVLFCDL 698 Query: 462 YEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD--GIRHIRAL 519 + VL E + +R EF + + + L Sbjct: 699 DRFKNINDSLGHTLGDAVLKEVARRLVARVRPGDTVCRYGGDEFVLVLPGLSDCVVLEQL 758 Query: 520 ANRVLNKEGEVERLLGINMDMT 541 A ++L L G+++ +T Sbjct: 759 AEQLLADVSSPILLDGLDLRVT 780 Score = 82.8 bits (204), Expect = 7e-14, Method: Composition-based stats. Identities = 40/270 (14%), Positives = 72/270 (26%), Gaps = 25/270 (9%) Query: 429 ERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYEC---------V 479 E A G+ + + + +P + E + Sbjct: 32 EYYRTALAHLNEGVLFVSPSGCMVPGNPEAVRIIAVPSAELSHVTREGEWETLTENGEPL 91 Query: 480 LPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLN-KEGEVERLLGINM 538 DR A R + R ++ +R A V ++ E + + Sbjct: 92 AMADRPGARACFAGETVERQVVGM--RRPGAAEVQWLRMNAAPVYQPEQQEPVGAVVTFV 149 Query: 539 DMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGV 598 D+T +Q E+L + + R ++ G+ D+A + + P +M G LG Sbjct: 150 DITRERQRQESLQRMEARWQALFETSGDVAYDFDVATRRLELAPAWMQMLG------LGR 203 Query: 599 PL----LTVLHITFGDNGPLMENIYSADTSRSA--IEQDVVLHCRSGGSYDVHYSITP-L 651 L +E A + L SG V Sbjct: 204 MPDDHYQDWLERVDPQVRDDVEAALCAHLQGETADYSVEYPLLHESGDWLHVFERGRVYQ 263 Query: 652 STLDGSNIGSVLVIQDVTESRKMLRQLSYS 681 DG + VI D++ Sbjct: 264 RDADGKPLRMHGVIIDLSRQLHAEEAQRRL 293 >UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY13_9BACT Length = 857 Score = 849 bits (2195), Expect = 0.0, Method: Composition-based stats. Identities = 145/734 (19%), Positives = 281/734 (38%), Gaps = 60/734 (8%) Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQV 474 E K+ E Q +R E I+ + ++ + +++ P Sbjct: 124 MERKQIELELQDGKQRYKRLVEILPDIIYRIDANGYFTFINEAV-QVFGYEPDELIGKH- 181 Query: 475 WYECVLPEDRQHAEKV---------------------------------IRDSLQSRSPF 501 + E + P+D + + +SP Sbjct: 182 FSELIHPDDLKKVSRSEVLSEYSGKTSDYKTTPKLFDERRTGQRKTTGLQIRVKSKKSPE 241 Query: 502 KLEFRIT----VKDGIRHIRALANRVLNKE-----GEVERLLGINMDMTEVKQLNEALFQ 552 +E+ I K + I A + + +G+ D+T K E + Sbjct: 242 YMEYTIQIIKWPKKHEKIIEVAATGHYDSDIMKNDKRFVGTVGVIRDITGSKHAEEMICT 301 Query: 553 EKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNG 612 L + ++ + D +I ++NP K++G+ EE LG L+ ++ Sbjct: 302 ----LSLAVEQSPAMIAVTDTDGRIDYINPKFCKVTGFEPEEVLGKNLIDIIQPGGESLS 357 Query: 613 PLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESR 672 + ++ A TS+ ++ + G + S++ + + +G + +++D+TE + Sbjct: 358 MADKTLWKAITSKGEWKEAFSSRKKHGELFWTSLSLSAIKSNEGFISHYLAIMEDITEHK 417 Query: 673 KMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAG 732 + ++ Y A +D+LT L NR F +L + + + Q A+ FID+DRFK VND+ G Sbjct: 418 QAEERIHYLAYYDSLTALPNRELFHDRLNMAIIHAHRKQQMLAVAFIDIDRFKKVNDTLG 477 Query: 733 HAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNV-ESARFIATRIISAVNDY 791 H+ GD LL+ +A + S +R D ++R GGDEF LLL + + E A + RI+ + + Sbjct: 478 HSTGDRLLKIIADRLKSCIREEDTVSRQGGDEFVLLLTEISRMEDANDVTQRILKKLKE- 536 Query: 792 HFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAH 851 I + + AS GI L + A ++ AD A Y SK GR Y Sbjct: 537 PVIIDDHDLCISASIGIALYPGDGTTAEALLKNADSAMYISKESGRDNYHFYSSTVQEKA 596 Query: 852 SERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFR 910 E+ + R ++ +L++ + I R + + +L W + +I F Sbjct: 597 YEQL-LEEMYLRRALENRELVLYYQPQVN--IATGRLVGMEALLRWKHPKKGLISPAEFI 653 Query: 911 RSFSDPALSHALDRRVFHEFFQQAAKAV--ASKGISISLPLSVAGLSSATLVNDLLEQLE 968 D +D V H +Q + I++ +S L++ + L Sbjct: 654 PLAEDTGQIVPIDFWVLHTACKQNMAWQRAGLPSVPIAVNISGHTFGRENLIDFVNNVLH 713 Query: 969 NSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMAD 1024 ++ + P L L I + + ++ + KL+ G +I + G + L Sbjct: 714 DTRMSPDALDLEITEGIAIQNLQTTIYKLNKLKSLGIQITIDDFGTGFSSLSYLSKFPIQ 773 Query: 1025 YLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYG 1084 L + N+ + + ++ + A+ L + IA V + L G+ D G Sbjct: 774 KLKIGMTFIHNLHKDPTNSAIVKAVIAMAKSLQLTVIAEGVETDEQFEFLQGLQCDEFQG 833 Query: 1085 EVIADAQPLDLLVN 1098 + + A + + Sbjct: 834 YLCSKAVTSEEMGR 847 Score = 138 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 62/439 (14%), Positives = 140/439 (31%), Gaps = 90/439 (20%) Query: 289 AFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQ 348 + + + + ++ +E + + G + N+A+ Q GY +EL G F Sbjct: 125 ERKQIELELQDGKQRYKRLVEILPDIIYRIDANGYFTFINEAV-QVFGYEPDELIGKHFS 183 Query: 349 QLTWPEDLNKDLQQ-------------------VEKLISGEINTYSMEKRYYNRNGDVVW 389 +L P+DL K + ++ +G+ T ++ R ++ + Sbjct: 184 ELIHPDDLKKVSRSEVLSEYSGKTSDYKTTPKLFDERRTGQRKTTGLQIRVKSKK-SPEY 242 Query: 390 ALLAVSLVRHT----------------------DGTPLYFIAQIEDINELKRTEQVNQQL 427 + +++ D + + I DI K E++ Sbjct: 243 MEYTIQIIKWPKKHEKIIEVAATGHYDSDIMKNDKRFVGTVGVIRDITGSKHAEEMICT- 301 Query: 428 MERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLP--EDRQ 485 ++LA E I + I + + ++ P + + + P E Sbjct: 302 ---LSLAVEQSPAMIAVTDTDGRIDYINPKFCKVTGFEPEEVLGKNLI-DIIQPGGESLS 357 Query: 486 HAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA-NRVLNKEGEVERLLGINMDMTEVK 544 A+K + ++ S+ +K F K G +L+ + + + EG + L I D+TE K Sbjct: 358 MADKTLWKAITSKGEWKEAFSSRKKHGELFWTSLSLSAIKSNEGFISHYLAIMEDITEHK 417 Query: 545 QLNEALF-----------QEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQE 593 Q E + +E H D + A++ ++ + + + Sbjct: 418 QAEERIHYLAYYDSLTALPNRELFH---DRLNMAIIHAHRKQQMLAV--AFIDI-----D 467 Query: 594 EALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYS-ITPLS 652 V + + + S + + G + + + I+ + Sbjct: 468 RFKKVNDTLGHSTGDRLLKIIADRLKSCIREEDTVS------RQGGDEFVLLLTEISRME 521 Query: 653 TLDGSNIGSVLVIQDVTES 671 + DVT+ Sbjct: 522 DAN-----------DVTQR 529 Score = 129 bits (325), Expect = 7e-28, Method: Composition-based stats. Identities = 56/346 (16%), Positives = 121/346 (34%), Gaps = 48/346 (13%) Query: 304 FRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWP--EDLNKDLQ 361 A+E S +A+ T+G+ N C+ G+ EE+ G + P E L+ + Sbjct: 302 LSLAVEQSPAMIAVTDTDGRIDYINPKFCKVTGFEPEEVLGKNLIDIIQPGGESLSMADK 361 Query: 362 QVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTE 421 + K I+ + + ++G++ W L++S ++ +G +++A +EDI E K+ E Sbjct: 362 TLWKAITSKGE-WKEAFSSRKKHGELFWTSLSLSAIKSNEGFISHYLAIMEDITEHKQAE 420 Query: 422 QVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLP 481 + L +L + L I ++ ++ + ++ + + Sbjct: 421 ERIHYLAYYDSLTALPNRELFHD-RLNMAIIHAHRK-QQMLAVAFIDIDRFKKVNDTLGH 478 Query: 482 EDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMT 541 K+I D L+ S + E ++ + G + L ++ D+T Sbjct: 479 STGDRLLKIIADRLK--SCIREEDTVSRQGGDEFVLLLTEISRMEDAN---------DVT 527 Query: 542 EVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGW----TQEEALG 597 + L + E V+ D + I + ++ + T EAL Sbjct: 528 QR----------------ILKKLKEPVIIDDHDLCI----SASIGIALYPGDGTTAEALL 567 Query: 598 VPLLT---VLHITFGDNGPLM-----ENIYSADTSRSAIEQDVVLH 635 + + + DN E Y + + + Sbjct: 568 KNADSAMYISKESGRDNYHFYSSTVQEKAYEQLLEEMYLRRALENR 613 >UniRef50_Q88LF0 Sensory box protein n=16 Tax=Proteobacteria RepID=Q88LF0_PSEPK Length = 1136 Score = 849 bits (2194), Expect = 0.0, Method: Composition-based stats. Identities = 156/834 (18%), Positives = 308/834 (36%), Gaps = 32/834 (3%) Query: 286 VMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGL 345 + + + +S+ A++ + +G L + Q G Sbjct: 305 DTTERKRAEQALKDSQERLDLALDSAQLGTWDWHIPSGMLYGSARAAQLHGLPPIPFHES 364 Query: 346 --TFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGT 403 F + + N Q L G Y + R NG + L R G Sbjct: 365 FDAFFEGVPEHERNSMRQAYRSLREGPAGNYQITYRVQLENGTSRYIESRARLYRDDQGI 424 Query: 404 PLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPN-IFSWDKRMFELY 462 PL + DI + EQ E+ + I + + + Sbjct: 425 PLRMAGTLLDITDQVEREQRLSASEEKFASLFQVSPDPICVTRQDTGQFIEINPAFTQTF 484 Query: 463 EIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANR 522 + E + A++ I ++ ++ + + ++G +++R Sbjct: 485 GWSSAQVLGRTAEEIGLWAESVERAKR-IEQVIREQALSNVAVVLNHRNGDPLTCVISSR 543 Query: 523 VLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMA-MKITFMN 581 ++ + + + D+T+ ++ AL +E+ S +A+ + + +N Sbjct: 544 LITVDDQPCS-VTTLRDITQQQRAEAALKSSEEKFAKAFHSSPDAITITERHSGRYLEVN 602 Query: 582 PVAEKMSGWTQEEALGVPLLTV-LHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGG 640 +++G++ +E +G + + + L+ + ++++ + G Sbjct: 603 DGFCRLTGYSTDEVIGHTVYEIGIWADDKQRSALLAELRE---RGRVHHREMLGRNKRGD 659 Query: 641 SYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQL 700 V S+ P+ +L +DV++ + Q+ + A HD LT+L NRA +L Sbjct: 660 ILTVEVSVEPI--TLNEVDCLLLTARDVSQLKNAQAQIRHLAYHDPLTNLPNRALLMDRL 717 Query: 701 RILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARL 760 + + + R AL+F+DLD FK +NDS GH GD +L+ + + + + +R D +ARL Sbjct: 718 SQQIALLKRHNLRGALLFLDLDHFKHINDSLGHPVGDTVLKIITARLEASVRLEDTVARL 777 Query: 761 GGDEFGLLLPDCN------VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDN 814 GGDEF +LL E R +A + + + +G+ +V S G+ LI D+ Sbjct: 778 GGDEFVVLLSGLEGSREHVEEKVRELADTLRELLAE-PMSLDGQRLQVTPSIGVALIPDH 836 Query: 815 NHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMML 874 A+++ +ADIA Y +K+ GR ++ A SER M D + + +L + Sbjct: 837 GTTPADLLKRADIALYRAKDSGRNTTQLFHTTMQKAASERLRMENDLRL-ALARGELALH 895 Query: 875 AHGVASPRIPEARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQ 933 R + R + L W F + + L + + E Sbjct: 896 FQPQVDAR--DNRIVGAEVLLRWHHPQLGQQPPSQFIQVLEESGLILEVGSWILDEACDA 953 Query: 934 AAKAV-----ASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILD 988 A+ + + ++ + +S V +L L++ LP ++L L I ++ Sbjct: 954 CARMLTDGLIDADDFNLCVNISPRQFRQNDFVGRVLRSLDDYRLPRQMLTLEITEGIVIQ 1013 Query: 989 HAE----SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEM 1044 + E + +L+ G + G LK D L +D + + D Sbjct: 1014 NLEDTISKMCELKRYGVSFAMDDFGTGYSSLTYLKRLPVDALKIDQSFVRDAPVDPNDAE 1073 Query: 1045 LITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 ++ I A+ L + IA V L + L +G L G + + PL Sbjct: 1074 IVRAIVAMARSLDLAVIAEGVELTEQLAFLERLGCHLYQGYLHSRPLPLPEFRQ 1127 Score = 214 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 71/407 (17%), Positives = 155/407 (38%), Gaps = 18/407 (4%) Query: 280 ANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALV-GTEGQWLQTNKALCQFLGYS 338 + + R + SE F S + L +G + N+ G+ Sbjct: 174 MIGVIREITRQRERETALINSEKRFATLFHLSPNAILLTRRRDGMIFEVNQHFEDMFGWP 233 Query: 339 QEELRGLTFQQL---TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVS 395 ++ G T +L PE ++ ++ ME ++ +G V +L Sbjct: 234 GSQVIGKTSLELGLWVNPEQRHQIVESTRA----NGGPLIMEVQFRATSGKVHDGILCTQ 289 Query: 396 LVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWD 455 + + I+ D E KR EQ + ER+ LA ++ +G W+W + + Sbjct: 290 GIELEG--VTFLISTFVDTTERKRAEQALKDSQERLDLALDSAQLGTWDWHIPSGMLYGS 347 Query: 456 KRMFELYEIPP-HIKPNWQVWYECVLPEDRQHAEKVIRDSLQ-SRSPFKLEFRITVKDGI 513 R +L+ +PP ++ ++E V +R + R + +++ +R+ +++G Sbjct: 348 ARAAQLHGLPPIPFHESFDAFFEGVPEHERNSMRQAYRSLREGPAGNYQITYRVQLENGT 407 Query: 514 -RHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCID 572 R+I + A + +G R+ G +D+T+ + + L +E+ + + Sbjct: 408 SRYIESRARLYRDDQGIPLRMAGTLLDITDQVEREQRLSASEEKFASLFQVSPDPICVTR 467 Query: 573 MA-MKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQD 631 + +NP + GW+ + LG + + ++ + I ++ Sbjct: 468 QDTGQFIEINPAFTQTFGWSSAQVLGRTAEEI--GLWAESVERAKRIEQVIREQALSNVA 525 Query: 632 VVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQL 678 VVL+ R+G S ++ D V ++D+T+ ++ L Sbjct: 526 VVLNHRNGDPLTCVISSRLITVDDQPCS--VTTLRDITQQQRAEAAL 570 Score = 180 bits (457), Expect = 4e-43, Method: Composition-based stats. Identities = 68/397 (17%), Positives = 125/397 (31%), Gaps = 25/397 (6%) Query: 298 SESET------HFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELR--GLTFQQ 349 ESE A+ + +G L E + ++ G+ + + + Sbjct: 58 QESEQAWQNAPQLLAALNGAHLGAWLWDIESGRVSWSRGTQALFGFDPQRPLPADIDYLD 117 Query: 350 LTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIA 409 L ED + Q + +++GE +M R +G + W + SL G P I Sbjct: 118 LLPEEDRARTRQVFQAVVNGEPVEQAMRHRIRWPDGSLHWLEINGSLTHDPHGRP-QMIG 176 Query: 410 QIEDINELKRTEQVNQQLMERITLANEAGGIGIWEW-ELKPNIFSWDKRMFELYEIPPHI 468 I +I + E +R I IF ++ +++ P Sbjct: 177 VIREITRQRERETALINSEKRFATLFHLSPNAILLTRRRDGMIFEVNQHFEDMFGWPGSQ 236 Query: 469 KPNWQVWY--ECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNK 526 V PE R + R + P +E + G H L + + Sbjct: 237 VIGKTSLELGLWVNPEQRHQIVESTRA---NGGPLIMEVQFRATSGKVHDGILCTQGIEL 293 Query: 527 EGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEK 586 EG V L+ +D TE K+ +AL +ERL + LDS + + + + A + Sbjct: 294 EG-VTFLISTFVDTTERKRAEQALKDSQERLDLALDSAQLGTWDWHIPSGMLYGSARAAQ 352 Query: 587 MSGWTQ---EEALGVPLLTVLHITFGDNGPLMENIYSADTSR--SAIEQDVVLHCRSGGS 641 + G E M Y + + + +G S Sbjct: 353 LHGLPPIPFHE----SFDAFFEGVPEHERNSMRQAYRSLREGPAGNYQITYRVQLENGTS 408 Query: 642 YDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQL 678 + G + + D+T+ + ++L Sbjct: 409 RYIESRARLYRDDQGIPLRMAGTLLDITDQVEREQRL 445 Score = 133 bits (336), Expect = 4e-29, Method: Composition-based stats. Identities = 46/276 (16%), Positives = 107/276 (38%), Gaps = 9/276 (3%) Query: 278 LPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTE-GQWLQTNKALCQFLG 336 L + + + +S SE F + + S + + + GQ+++ N A Q G Sbjct: 426 LRMAGTLLDITDQVEREQRLSASEEKFASLFQVSPDPICVTRQDTGQFIEINPAFTQTFG 485 Query: 337 YSQEELRGLTFQQL-TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVS 395 +S ++ G T +++ W E + + +++E++I + + ++ +RNGD + +++ Sbjct: 486 WSSAQVLGRTAEEIGLWAESVERA-KRIEQVIREQALS-NVAVVLNHRNGDPLTCVISSR 543 Query: 396 LVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKP-NIFSW 454 L+ D + + DI + +R E + E+ A + I E Sbjct: 544 LITVDDQ--PCSVTTLRDITQQQRAEAALKSSEEKFAKAFHSSPDAITITERHSGRYLEV 601 Query: 455 DKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIR 514 + L V+ + +D+Q + ++ + + E K G Sbjct: 602 NDGFCRLTGYSTDEVIGHTVYEIGIWADDKQRS-ALLAELRERGRVHHREMLGRNKRGDI 660 Query: 515 HIRALANRVLNKEGEVERLLGINMDMTEVKQLNEAL 550 ++ + EV+ LL D++++K + Sbjct: 661 LTVEVSVEPITLN-EVDCLLLTARDVSQLKNAQAQI 695 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 45/280 (16%), Positives = 102/280 (36%), Gaps = 16/280 (5%) Query: 285 MVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTE-GQWLQTNKALCQFLGYSQEELR 343 + + + SE F A S + + G++L+ N C+ GYS +E+ Sbjct: 558 RDITQQQRAEAALKSSEEKFAKAFHSSPDAITITERHSGRYLEVNDGFCRLTGYSTDEVI 617 Query: 344 GLTFQQL-TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDG 402 G T ++ W +D + + + + E N+ GD++ ++V + Sbjct: 618 GHTVYEIGIWADDKQR--SALLAELRERGRVHHREMLGRNKRGDILTVEVSVEPITLN-- 673 Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIF--SWDKRMFE 460 + D+++LK + + L L N + + + + R Sbjct: 674 EVDCLLLTARDVSQLKNAQAQIRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGAL 733 Query: 461 LYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA 520 L+ +++ + + K+I L++ +LE + G + L+ Sbjct: 734 LF----LDLDHFKHINDSLGHPVGDTVLKIITARLEA--SVRLEDTVARLGGDEFVVLLS 787 Query: 521 NRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHIT 560 ++E E++ + T + L E + + +RL +T Sbjct: 788 GLEGSREHVEEKVRELAD--TLRELLAEPMSLDGQRLQVT 825 >UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JX80_DESAC Length = 678 Score = 848 bits (2193), Expect = 0.0, Method: Composition-based stats. Identities = 140/678 (20%), Positives = 264/678 (38%), Gaps = 14/678 (2%) Query: 430 RITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEK 489 + E I I ++ E + +++ + + + Sbjct: 2 QYADLLENSNDLIQVVGFDGRIIYANRMWQETLGYGKNDLTQLN-FFDLLHADFHCDCQD 60 Query: 490 VIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEA 549 I+ + + + E + G + I + + + GE + G D+T K+ +A Sbjct: 61 RIQRLMSGETVPRFEVEYKTRYGHKIIAEGSISLYKENGEPCGIQGFFRDITARKKTEKA 120 Query: 550 LFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFG 609 L +ER +S + + N G+ +EE L + + V H Sbjct: 121 LQTSEERFRTIYESSVAGIAMLAPDGHFLQANSAFCNFLGYNEEELLQMKITDVTHPDDI 180 Query: 610 DNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVT 669 ++ NI A+ S + + + G + S T +G+ + +V VIQD+T Sbjct: 181 EDTLSRRNIARANRLHSIV-CEKRYIRKDGSVFWAQLSSTWFFDANGNPLYTVPVIQDIT 239 Query: 670 ESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVND 729 ++ ++ A +D+LT LANR F +L ++ R AL+F+DLDRFK VND Sbjct: 240 RRKEAEERIRELAYYDSLTGLANRTLFNDRLDQVMARSRRRQSRFALMFLDLDRFKGVND 299 Query: 730 SAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVES-ARFIATRIISAV 788 + GHA GDA+LR+ A + LR +D +ARLGGDEF ++L D ++ +A +I+ A+ Sbjct: 300 TLGHAVGDAMLRQAAERLNECLRENDTVARLGGDEFVIILSDYKEDANLPRVADKILKAL 359 Query: 789 NDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQA 848 + F R S GI + D+ +A +++ AD+A YA+K G Y + Sbjct: 360 S-SPFDLGVREVYSSTSVGIAIYPDDGDEATDLLRHADMAMYAAKESGGDTFRFYSSEMN 418 Query: 849 AAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQ 907 A R M + + R +++ + + + + +L W + +I Sbjct: 419 ARAVSRMDMEANLR-RALEQEEFFIEYQPQIDLI--TNKVAGVEALLRWQHPQLGVIPPT 475 Query: 908 TFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK--GISISLPLSVAGLSSATLVNDLLE 965 F + L L V F+Q + + +S V+ + Sbjct: 476 QFIGLAEETNLILPLGEWVMRRVFEQCVMWKQEGYLPFRVGINVSGRQFVQPDFVDMVCR 535 Query: 966 QLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLSQVGRDLQIFNSLKAN 1021 L+ + P LL I ++ + +++ L+ G + + G + LK Sbjct: 536 LLDETGAAPELLEFEITESVVMKDVDAAVLTLEALKKLGINMAIDDFGTGYSSLSCLKHL 595 Query: 1022 MADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDL 1081 + L +D +++Q N D ++ A+RL + A V + D Sbjct: 596 PLNRLKIDKSFISDLQDNADDRAIVEATIAMAKRLELGVTAEGVETEGQYGFVQKRECDE 655 Query: 1082 IYGEVIADAQPLDLLVNS 1099 + G + + ++ Sbjct: 656 VQGFYFSRPLSPSEVADA 673 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 94/252 (37%), Gaps = 5/252 (1%) Query: 303 HFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQ 362 + + +E S + +VG +G+ + N+ + LGY + +L L F L + + Sbjct: 2 QYADLLENSNDLIQVVGFDGRIIYANRMWQETLGYGKNDLTQLNFFDLLHADFHCDCQDR 61 Query: 363 VEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQ 422 +++L+SGE E Y R G + A ++SL + +G P DI K+TE+ Sbjct: 62 IQRLMSGETVP-RFEVEYKTRYGHKIIAEGSISLYK-ENGEPCGIQGFFRDITARKKTEK 119 Query: 423 VNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPE 482 Q ER E+ GI + + + + P+ Sbjct: 120 ALQTSEERFRTIYESSVAGIAMLAPDGHFLQANSAFCNFLGYNEEELLQMK-ITDVTHPD 178 Query: 483 DRQHAEKVIRDSLQSR-SPFKLEFRITVKDG-IRHIRALANRVLNKEGEVERLLGINMDM 540 D + + +R E R KDG + + + + G + + D+ Sbjct: 179 DIEDTLSRRNIARANRLHSIVCEKRYIRKDGSVFWAQLSSTWFFDANGNPLYTVPVIQDI 238 Query: 541 TEVKQLNEALFQ 552 T K+ E + + Sbjct: 239 TRRKEAEERIRE 250 Score = 156 bits (394), Expect = 6e-36, Method: Composition-based stats. Identities = 55/235 (23%), Positives = 101/235 (42%), Gaps = 10/235 (4%) Query: 285 MVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRG 344 + A + K + SE FR E S G+A++ +G +LQ N A C FLGY++EEL Sbjct: 109 RDITARKKTEKALQTSEERFRTIYESSVAGIAMLAPDGHFLQANSAFCNFLGYNEEELLQ 168 Query: 345 LTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTP 404 + +T P+D+ L + + +++ EKRY ++G V WA L+ + +G P Sbjct: 169 MKITDVTHPDDIEDTLSRRNIARANRLHSIVCEKRYIRKDGSVFWAQLSSTWFFDANGNP 228 Query: 405 LYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI 464 LY + I+DI K E+ ++L +L A + + + +R + + Sbjct: 229 LYTVPVIQDITRRKEAEERIRELAYYDSLTGLANRTLF--NDRLDQVMARSRRRQSRFAL 286 Query: 465 PPHIKPNW--------QVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD 511 + + +L + + + +R++ EF I + D Sbjct: 287 MFLDLDRFKGVNDTLGHAVGDAMLRQAAERLNECLRENDTVARLGGDEFVIILSD 341 >UniRef50_A6UJR0 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=Alphaproteobacteria RepID=A6UJR0_SINMW Length = 1071 Score = 847 bits (2190), Expect = 0.0, Method: Composition-based stats. Identities = 177/838 (21%), Positives = 333/838 (39%), Gaps = 43/838 (5%) Query: 282 IMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEE 341 + + R + ESE FR + + + + + G N+ + G ++ E Sbjct: 249 GLLEDVDERRRAADALRESEARFRAIADDAPVMIWVADPTGDTSFFNRLWLETTGQTEAE 308 Query: 342 LRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTD 401 G + + P+D + K +G+ T S E R +G W + D Sbjct: 309 ALGFGWVDVIHPDDRQAVQEIFFKATAGKGPTRS-EYRLRRADGSWAWVIDVGQPRFSAD 367 Query: 402 GTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFEL 461 GT L ++ + DI + + E Q+ I ++ + +L+ ++ + Sbjct: 368 GTFLGYVGSVLDITDRRAGEIAQQEAQAFIRSIFDSSPDCVRVLDLEGRPLLMNEAGRRI 427 Query: 462 YEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGI-RHIRALA 520 + + Q W D E +S++ + E + G R + +A Sbjct: 428 FGLNEDAPITGQTWDSIGRASDAHKVEAGW-ESVRHGKTARFEITVRDAGGEERCMDVIA 486 Query: 521 NRVLNKEGEVERLLGINMDMTEVK-------QLNEALFQEKERLHITLDSIGEAVVCIDM 573 + + G+ R+L I D+T+ K + + +L L+S ++V+ +D Sbjct: 487 APITDNLGKPSRILSIWRDITDAKLASDEISRAQKHAEAAASQLSSVLESTMDSVMLLDA 546 Query: 574 AMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVV 633 ++ ++N A+K+ +EALG + + G ++ R + Sbjct: 547 DWRVRYLNENAKKLLQIG-DEALGKKFWKLFPE--EEMGNFAKHCREVMERRVRSFFEDH 603 Query: 634 LHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLR-------QLSYSASHDA 686 L + + +P G + +D+TE R+ QL++ A HD Sbjct: 604 LPSLG---RWIEANASPTQD------GISIFCRDITERRRAEEDTLLAQKQLAHMARHDM 654 Query: 687 LTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASL 746 LT L NR F + L H R A++ +DLD FKA+ND+ GH AGD LLR+++ Sbjct: 655 LTGLPNRMFFRECFEQALNESR--HARMAVLCLDLDGFKAINDTLGHPAGDVLLRQVSQR 712 Query: 747 MLSMLRSSDVLARLGGDEFGLLLP-DCNVESARFIATRIISAVNDYHFIWEGRVHRVGAS 805 ++ +R+++ +ARLGGDEF ++ P + + A +A R+I +++ F EG VG S Sbjct: 713 LIQSVRTTETVARLGGDEFAIIQPLAKSRDEAFHLAQRLIDTLSE-PFSIEGAAATVGTS 771 Query: 806 AGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRM 865 GI ++ A E++ ADIA Y++K+ GRG +++ A M + + Sbjct: 772 IGIAFAPEDGTSADELIKAADIALYSAKSSGRGTYRLFDVAMHAQLQAHQQMKVAMR-DA 830 Query: 866 IKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDR 924 + + + + + + +L W + +I F + + Sbjct: 831 LANREFELHYQPLVN--LESRCVSCCEALLRWRHPQRGMIAPSEFIPIAEETGAIVLIGE 888 Query: 925 RVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAE 984 + E +QAA+ +S+++ LS LV + L +S L P L L I Sbjct: 889 WLLDEACRQAARWPER--VSVAVNLSPVQFKHRNLVGAVANALSSSHLDPARLQLEITET 946 Query: 985 AILD----HAESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNL 1040 +LD + E +Q LR G +I + G L++ D + +D ++ Sbjct: 947 VLLDESEHNLELLQDLRRLGVKIAMDDFGTGYSSLGYLRSFPFDKIKVDQAFVRDLPHGR 1006 Query: 1041 MDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 ++ + G Q LGM T V + ++ G D + G + + P + Sbjct: 1007 ESLAIVKAVAGLGQSLGMTTTVEGVETEDQLAIVNSEGFDEVQGYLFSRPLPAAEISR 1064 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 56/401 (13%), Positives = 147/401 (36%), Gaps = 7/401 (1%) Query: 282 IMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEE 341 + + + R + + SE H+R+ ++ + G+ L+ + G ++E Sbjct: 123 VTIVDITELRGIEETLRASEEHYRSLVDLHPQVPWIADRAGEVLEVGPRWSELTGLGEKE 182 Query: 342 LRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTD 401 G + + P+D + ++ E R G+ W + R D Sbjct: 183 TLGKGWAKAVHPQDAGALQDAWRRSLTN-GTPLDWEYRLLTMTGEYRWFRARAAAKRDAD 241 Query: 402 GTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFEL 461 + + +ED++E +R ++ R + + IW + + +++ E Sbjct: 242 EKIVRWYGLLEDVDERRRAADALRESEARFRAIADDAPVMIWVADPTGDTSFFNRLWLET 301 Query: 462 YEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIR-HIRALA 520 + W + + P+DRQ +++ + + P + E+R+ DG + + Sbjct: 302 TGQTEAEALGFG-WVDVIHPDDRQAVQEIFFKATAGKGPTRSEYRLRRADGSWAWVIDVG 360 Query: 521 NRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFM 580 + +G +G +D+T+ + A + + + DS + V +D+ + M Sbjct: 361 QPRFSADGTFLGYVGSVLDITDRRAGEIAQQEAQAFIRSIFDSSPDCVRVLDLEGRPLLM 420 Query: 581 NPVAEKMSGWTQEE-ALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSG 639 N ++ G ++ G ++ + +E + + ++ + G Sbjct: 421 NEAGRRIFGLNEDAPITGQTWDSIGRASDAHK---VEAGWESVRHGKTARFEITVRDAGG 477 Query: 640 GSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSY 680 + P++ G + + +D+T+++ ++S Sbjct: 478 EERCMDVIAAPITDNLGKPSRILSIWRDITDAKLASDEISR 518 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 79/390 (20%), Positives = 146/390 (37%), Gaps = 8/390 (2%) Query: 298 SESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLN 357 S F+ M+ A + + +++ N+A C L + EL G T L E + Sbjct: 11 RRSYNLFQYLMDGVAEPVIVKDAGSRFVFINEAACFLLDKDRNELLGRTDHDLLPTEQAD 70 Query: 358 KDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDG--TPLYFIAQIEDIN 415 K + +++++ + +E++ +G L V G + + I DI Sbjct: 71 KIV-ALDRVVLSTGEGHEIEEQITTPDGTSRTLLTKKRPVSIPTGSTEEKFVVVTIVDIT 129 Query: 416 ELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVW 475 EL+ E+ + E + W + + R EL + + W Sbjct: 130 ELRGIEETLRASEEHYRSLVDLHPQVPWIADRAGEVLEVGPRWSELTGLGEKETLG-KGW 188 Query: 476 YECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITV-KDGIRHIRALANRVLNKEGEVERLL 534 + V P+D + R SL + +P E+R+ R RA A + + ++ R Sbjct: 189 AKAVHPQDAGALQDAWRRSLTNGTPLDWEYRLLTMTGEYRWFRARAAAKRDADEKIVRWY 248 Query: 535 GINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEE 594 G+ D+ E ++ +AL + + R D + D +F N + + +G T+ E Sbjct: 249 GLLEDVDERRRAADALRESEARFRAIADDAPVMIWVADPTGDTSFFNRLWLETTGQTEAE 308 Query: 595 ALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTL 654 ALG + V+H + E + A + + L G V P + Sbjct: 309 ALGFGWVDVIHPDDRQ--AVQEIFFKATAGKGPTRSEYRLRRADGSWAWVIDVGQPRFSA 366 Query: 655 DGSNIGSVLVIQDVTESRKML-RQLSYSAS 683 DG+ +G V + D+T+ R Q A Sbjct: 367 DGTFLGYVGSVLDITDRRAGEIAQQEAQAF 396 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 44/299 (14%), Positives = 107/299 (35%), Gaps = 20/299 (6%) Query: 268 MPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQT 327 P L + + RA E++ R+ + S + ++ EG+ L Sbjct: 361 QPRFSADGTFLGYVGSVLDITDRRAGEIAQQEAQAFIRSIFDSSPDCVRVLDLEGRPLLM 420 Query: 328 NKALCQFLGYSQEE-LRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGD 386 N+A + G +++ + G T+ + D +K E + G+ + E + G+ Sbjct: 421 NEAGRRIFGLNEDAPITGQTWDSIGRASDAHKVEAGWESVRHGKTARF--EITVRDAGGE 478 Query: 387 VVWALLAVSLVRHTDGTPLYFIAQIEDINELK-------RTEQVNQQLMERITLANEAGG 439 + + + G P ++ DI + K R ++ + +++ E+ Sbjct: 479 ERCMDVIAAPITDNLGKPSRILSIWRDITDAKLASDEISRAQKHAEAAASQLSSVLESTM 538 Query: 440 IGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRS 499 + + + ++ +L +I + +++ E+ + K R+ ++ R Sbjct: 539 DSVMLLDADWRVRYLNENAKKLLQIGDEAL--GKKFWKLFPEEEMGNFAKHCREVMERRV 596 Query: 500 PFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLH 558 E + R I A A+ + + D+TE ++ E +++L Sbjct: 597 RSFFEDHLPSLG--RWIEANASPTQD------GISIFCRDITERRRAEEDTLLAQKQLA 647 Score = 75.9 bits (186), Expect = 9e-12, Method: Composition-based stats. Identities = 27/251 (10%), Positives = 72/251 (28%), Gaps = 23/251 (9%) Query: 273 FLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALC 332 L I + +KH + + + +E + + L+ + + N+ Sbjct: 499 ILSIWRDITDAKLASDEISRAQKHAEAAASQLSSVLESTMDSVMLLDADWRVRYLNENAK 558 Query: 333 QFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALL 392 + L +E G F +L E++ + +++ + ++ E + W Sbjct: 559 KLLQIG-DEALGKKFWKLFPEEEMGNFAKHCREVMERRVRSF-FEDHLPSLG---RWIEA 613 Query: 393 AVSLVRHTDGTPLYFIAQIEDINELKRTEQ-------VNQQLMERITLANEAGGIGIWEW 445 S + DI E +R E+ + L + Sbjct: 614 NASPTQD------GISIFCRDITERRRAEEDTLLAQKQLAHMARHDMLTGLPNRMFF--- 664 Query: 446 ELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECV-LPEDRQHAEKVIRDSLQSRSPFKLE 504 + + ++ + ++ + + P +V + +QS + Sbjct: 665 -RECFEQALNESRHARMAVLCLDLDGFKAINDTLGHPAGDVLLRQVSQRLIQSVRTTETV 723 Query: 505 FRITVKDGIRH 515 R+ + Sbjct: 724 ARLGGDEFAII 734 Score = 61.6 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 47/135 (34%), Gaps = 4/135 (2%) Query: 547 NEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHI 606 + +D + E V+ D + F+N A + + E LG +L Sbjct: 7 EGPSRRSYNLFQYLMDGVAEPVIVKDAGSRFVFINEAACFLLDKDRNELLGRTDHDLLPT 66 Query: 607 TFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNI--GSVLV 664 D ++ + ++ E + + G S + P+S GS V+ Sbjct: 67 EQADKIVALDRVV--LSTGEGHEIEEQITTPDGTSRTLLTKKRPVSIPTGSTEEKFVVVT 124 Query: 665 IQDVTESRKMLRQLS 679 I D+TE R + L Sbjct: 125 IVDITELRGIEETLR 139 >UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X9G9_METSD Length = 984 Score = 847 bits (2189), Expect = 0.0, Method: Composition-based stats. Identities = 173/879 (19%), Positives = 305/879 (34%), Gaps = 77/879 (8%) Query: 285 MVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRG 344 + A + R ++ S + L G+WL N + L + +G Sbjct: 107 QDVTERFASEYELRSMLNLLRKLIDASPDYICLKDGAGRWLHANTSGLSLLHLNGVNTQG 166 Query: 345 LTFQ---QLTWPEDLNKDLQQVEKL---ISGEINTYSMEKRYYNRNGDVVWALLAVSLVR 398 T + LT P + +Q + + E+ GD V + + Sbjct: 167 KTDRELADLTHPNLRD-FMQHWQAADEYVWETGQLLREEETVPLPGGDRV-LDVIKVPLF 224 Query: 399 HTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRM 458 H DG+ + DI + K+ E +Q + +A W + + Sbjct: 225 HDDGSRHGIVTLGRDITDRKQVESQLRQR----SAILDALISCDWLLHSSESWQKVAVGV 280 Query: 459 FELYEI--------------------PPHIKPNWQVWYECVLPEDRQHAEKVIRDS---- 494 EL + P + D H +RD Sbjct: 281 LELLGLASHASRAALLKNSSDIEAEAPISELLHHWNAPGFKPLSDGYHCIDYLRDGCSRW 340 Query: 495 ---LQSRSPFKLEFRITVKDGIRHIRAL-----ANRVLNKEGEVERLLGINMD-----MT 541 LQ SP D R + + ++ I D +T Sbjct: 341 LNILQQGSPIFGNADDFPPDERRFLLNHDSQSFVIIPIFVHAHWWGVIMIERDHAASTVT 400 Query: 542 EVKQ--------------LNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKM 587 + E+ + I +S E + D ++ +N + Sbjct: 401 SQELGALMSIGRSFGVAIQRESSDHRLHQAKIAFESTAEGIFITDDELRTIAINQGFTDI 460 Query: 588 SGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYS 647 +G+T+++ LG + I+ A T + ++ Y + Sbjct: 461 TGYTEDDVLGNIPNVL--EADLKKPEPHREIWKALTREGRWRGEFWNQRKNNEQYAEWVT 518 Query: 648 ITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTV 707 +T ++ +G I V V D++E + +L+ + D LT L NR + L ++ Sbjct: 519 LTAVNNEEGKVINYVGVFADISEIKHSQSRLNELVNRDPLTGLPNRRLMHELLDHAIKYA 578 Query: 708 NSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGL 767 AL+F+DLDRFKA+ND+ GH GD LL E++ + + +R SD +ARLGGDEF + Sbjct: 579 EREQNEIALLFVDLDRFKAINDTLGHQMGDKLLFEVSQRIRAAVRDSDAVARLGGDEFIV 638 Query: 768 LLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQAD 826 ++ E A +A +IIS++ F+ +GR + AS GI++ D++ ++ AD Sbjct: 639 MMDVLREREDAAKVAKKIISSL-QNEFLIDGRELFISASVGISVYPDDSLDVDGLIKAAD 697 Query: 827 IACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEA 886 IA Y KN G+ Y + ER + + R + +Q + S + Sbjct: 698 IAMYQVKNKGKNNHCFYSADLSQNAVERFTLENQLR-RALARDQFEVYYQAQVS--LETG 754 Query: 887 RNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK-GI- 943 R + SL W E ++ F + L + V + Q + I Sbjct: 755 RIIGAESLIRWIHPELGVVSPAKFIPLAEETGLIIPIGEWVLRQSAMQVKEWHDQGFDID 814 Query: 944 SISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESV----QKLRLA 999 +S+ +S + + + + L + LL L I ++ + E V +++ Sbjct: 815 WVSVNVSGVQIQRSNFADTVYGILVETDCESHLLELEITESTVMHNTEYVIDVFDRIKHL 874 Query: 1000 GCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMK 1059 G R+ + G + LK D + +D ++ N D + T I AQ LG Sbjct: 875 GVRLAIDDFGTGYSSLSHLKRLPLDKIKIDQSFVRDLPNNSDDAAIATAINAMAQSLGFT 934 Query: 1060 TIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 IA V L IG G + + Sbjct: 935 VIAEGVETRQQASFLKKIGCQQGQGYLYSRPVTASEFTA 973 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 32/258 (12%), Positives = 91/258 (35%), Gaps = 8/258 (3%) Query: 274 LLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQ 333 L L+ V + + ++ + A E +A G+ + E + + N+ Sbjct: 404 LGALMSIGRSFGVAIQRESSDHRLHQA----KIAFESTAEGIFITDDELRTIAINQGFTD 459 Query: 334 FLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLA 393 GY+++++ G L + +++ K ++ E + E +N + + Sbjct: 460 ITGYTEDDVLGNIPNVLEADLKKPEPHREIWKALTRE-GRWRGEFWNQRKNNEQYAEWVT 518 Query: 394 VSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFS 453 ++ V + +G + ++ DI+E+K ++ +L+ R L + E L I Sbjct: 519 LTAVNNEEGKVINYVGVFADISEIKHSQSRLNELVNRDPLTGLPNRRLMHEL-LDHAIKY 577 Query: 454 WDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGI 513 ++ E+ + ++ + + + + +++ + + + Sbjct: 578 AEREQNEI-ALLFVDLDRFKAINDTLGHQMGDKLLFEVSQRIRA-AVRDSDAVARLGGDE 635 Query: 514 RHIRALANRVLNKEGEVE 531 + R +V Sbjct: 636 FIVMMDVLREREDAAKVA 653 Score = 83.2 bits (205), Expect = 6e-14, Method: Composition-based stats. Identities = 33/274 (12%), Positives = 89/274 (32%), Gaps = 27/274 (9%) Query: 298 SESETHFRNAMEYSAIGMALV--GTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPED 355 +++E+ + + ++ G+A++ + + Q L L P Sbjct: 5 AQTESDLIHQLLHAMDGVAVIAFDAKLHIRYASPYGLQIL-------------SLKSPS- 50 Query: 356 LNKDLQQVEKLISGEINTYSMEKRYYNRNG---DVVWALLAVSLVRHTDGTPLYFIAQIE 412 K + + + E+ +++ + G + +L T G ++ ++ Sbjct: 51 RAKLPASIGQRVLAELQKNNLKFTLQHAVGNALKSFCVQI-ATLEPATAGAD--YVLYMQ 107 Query: 413 DINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNW 472 D+ E +E + ++ + +A I + + L + Sbjct: 108 DVTERFASEYELRSMLNLLRKLIDASPDYICLKDGAGRWLHANTSGLSLLHLNGVNTQGK 167 Query: 473 QV--WYECVLPEDRQ---HAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKE 527 + P R H + ++ + E + + G R + + + + + Sbjct: 168 TDRELADLTHPNLRDFMQHWQAADEYVWETGQLLREEETVPLPGGDRVLDVIKVPLFHDD 227 Query: 528 GEVERLLGINMDMTEVKQLNEALFQEKERLHITL 561 G ++ + D+T+ KQ+ L Q L + Sbjct: 228 GSRHGIVTLGRDITDRKQVESQLRQRSAILDALI 261 Score = 72.8 bits (178), Expect = 7e-11, Method: Composition-based stats. Identities = 35/261 (13%), Positives = 78/261 (29%), Gaps = 16/261 (6%) Query: 423 VNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPE 482 + L + G+ + ++ K +I ++ + + Sbjct: 5 AQTESDLIHQLLHAMDGVAVIAFDAKLHIRYASPYGLQILSL-------KSPSRAKLPAS 57 Query: 483 DRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTE 542 Q ++ + F L+ + ++ L + D+TE Sbjct: 58 IGQRVLAELQKNNLK---FTLQHAVGNALKSFCVQ---IATLEPATAGADYVLYMQDVTE 111 Query: 543 VKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLT 602 L L +D+ + + D A + N + G Sbjct: 112 RFASEYELRSMLNLLRKLIDASPDYICLKDGAGRWLHANTSGLSLLHLNGVNTQGKTDRE 171 Query: 603 VLHITFGDNGPLMENIYSADT---SRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNI 659 + +T + M++ +AD + ++ GG + PL DGS Sbjct: 172 LADLTHPNLRDFMQHWQAADEYVWETGQLLREEETVPLPGGDRVLDVIKVPLFHDDGSRH 231 Query: 660 GSVLVIQDVTESRKMLRQLSY 680 G V + +D+T+ +++ QL Sbjct: 232 GIVTLGRDITDRKQVESQLRQ 252 >UniRef50_B8GLY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GLY5_THISH Length = 1082 Score = 846 bits (2187), Expect = 0.0, Method: Composition-based stats. Identities = 140/697 (20%), Positives = 267/697 (38%), Gaps = 24/697 (3%) Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPN 471 ++ + ++ E R EA I+ + + + L Sbjct: 378 REVEQRRQAEAEVLAQSRRQAQVLEAVDEAIFGLDADCRVEFANPAAEALAGCSIGQMRG 437 Query: 472 WQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFR------ITVKDGIRHIRALANRVLN 525 ++ + +D+ + + P + R + +DG + A R + Sbjct: 438 QRLSGVLQIRDDQGRSAWEPDGDCLAEDPMPVSIRRAFDQTLYHRDGRVLVVDYAFRPIL 497 Query: 526 KEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAE 585 + G+V + D+T K++ E+L D+ E V+ D +I +N E Sbjct: 498 EGGQVRGGVFSCRDITGRKRIEESL----RLHAQVFDTATEGVMIADARGRILSVNRAFE 553 Query: 586 KMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVH 645 +++G++ EE +G + + + ++ ++ + G Y Sbjct: 554 QVTGYSAEEVVGRNPSIL--SSGRQDKAFYRRMWDTIKGEGIWSGEIWNRRKDGEIYPEW 611 Query: 646 YSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQ 705 +I+ ++ +G V V D+T ++ +++ + A+HD LT LANR FE +L + Sbjct: 612 LTISSIAGPNGEASHFVAVFSDITAQKRSEQEIDFLANHDPLTGLANRNLFEDRLAHAIS 671 Query: 706 TVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEF 765 Q L+ +DLDRF+ +ND GH GDALLRE + +R SD +ARLGGDEF Sbjct: 672 MAGRNGQHVGLLLVDLDRFRLINDGMGHGPGDALLRETGRRLGHCVRDSDTVARLGGDEF 731 Query: 766 GLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQ 824 G++L + A A RI+ A+ G+ S GI + + AA ++ Sbjct: 732 GIILEGLADAADAGMQAERILEAMRA-PLRLGGQELFCTVSIGIAVFPADGTDAATLLRH 790 Query: 825 ADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIP 884 AD A +K GR Y A R + + ++ ++L + + Sbjct: 791 ADTAMALAKREGRNNFQFYTHALTEAVFSRLNIETGLR-HALERDELRLHYQPILD--AA 847 Query: 885 EARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA--VASK 941 R + SL W E ++ F L AL R Q + Sbjct: 848 SGRIAAMESLMRWQHPERGLVSPGVFIPVAEQSDLILALGRWALVSACAQVRAWSDAGLE 907 Query: 942 GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLR 997 + +S+ + V ++L + + + P+ L + + A+++ E +++LR Sbjct: 908 PVPVSVNIPACHFRQPGFVEEVLGVVRETGVQPQSLIIELTESALMEPVSLAEERIRRLR 967 Query: 998 LAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLG 1057 G + + G L+ +YL +D + + G+ + + G + LG Sbjct: 968 DTGVVVAIDDFGTGYSSLGYLQRFHVNYLKVDRSFVSGLPGDENARAITEAVIGVSHSLG 1027 Query: 1058 MKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLD 1094 ++ +A V +D L G D + G + + Sbjct: 1028 LQVVAEGVETQAQLDHLRATGCDKVQGYLTGRPVTAE 1064 Score = 152 bits (385), Expect = 8e-35, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 81/245 (33%), Gaps = 3/245 (1%) Query: 294 RKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWP 353 RK I ES + + G+ + G+ L N+A Q GYS EE+ G L+ Sbjct: 515 RKRIEESLRLHAQVFDTATEGVMIADARGRILSVNRAFEQVTGYSAEEVVGRNPSILSSG 574 Query: 354 EDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIED 413 +++ I GE +S E ++G++ L +S + +G +F+A D Sbjct: 575 RQDKAFYRRMWDTIKGE-GIWSGEIWNRRKDGEIYPEWLTISSIAGPNGEASHFVAVFSD 633 Query: 414 INELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQ 473 I KR+EQ L L A + + S R + + ++ Sbjct: 634 ITAQKRSEQEIDFLANHDPLTGLANRNLF--EDRLAHAISMAGRNGQHVGLLLVDLDRFR 691 Query: 474 VWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERL 533 + + + + L D I + + ER+ Sbjct: 692 LINDGMGHGPGDALLRETGRRLGHCVRDSDTVARLGGDEFGIILEGLADAADAGMQAERI 751 Query: 534 LGINM 538 L Sbjct: 752 LEAMR 756 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 34/277 (12%), Positives = 84/277 (30%), Gaps = 13/277 (4%) Query: 281 NIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQE 340 + + R + +E + + + + N A G S Sbjct: 374 RSLQREVEQRRQAEAEVLAQSRRQAQVLEAVDEAIFGLDADCRVEFANPAAEALAGCSIG 433 Query: 341 ELRGLTFQQL--TWPEDLNKDLQQVEKLISGEINTYS----MEKRYYNRNGDVVWALLAV 394 ++RG + + + ++ + S ++ Y+R+G V+ A Sbjct: 434 QMRGQRLSGVLQIRDDQGRSAWEPDGDCLAEDPMPVSIRRAFDQTLYHRDGRVLVVDYAF 493 Query: 395 SLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSW 454 + G + DI KR E+ + + G+ + + I S Sbjct: 494 RPI-LEGGQVRGGVFSCRDITGRKRIEESLR----LHAQVFDTATEGVMIADARGRILSV 548 Query: 455 DKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIR 514 ++ ++ +D + + + D+++ + E KDG Sbjct: 549 NRAFEQVTGYSAEEVVGRNPSILSSGRQD-KAFYRRMWDTIKGEGIWSGEIWNRRKDGEI 607 Query: 515 HIRA-LANRVLNKEGEVERLLGINMDMTEVKQLNEAL 550 + + + GE + + D+T K+ + + Sbjct: 608 YPEWLTISSIAGPNGEASHFVAVFSDITAQKRSEQEI 644 >UniRef50_C5SCB7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SCB7_CHRVI Length = 811 Score = 846 bits (2187), Expect = 0.0, Method: Composition-based stats. Identities = 177/808 (21%), Positives = 323/808 (39%), Gaps = 26/808 (3%) Query: 302 THFRNAMEYSAIGMALVG-TEGQWLQTNKALCQFLGYSQEELRGLTFQQL-TWPEDLNKD 359 + ++ + LV ++ + L N+A + LG + L G + +L PED Sbjct: 6 DLAQALIDELIDAVWLVDGSDQRLLAVNRAAEELLGQGRASLVGRSMSELACTPED---- 61 Query: 360 LQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKR 419 L E + +G +T E ++G +V L V V DG L ++A + +E + Sbjct: 62 LFFWEDVAAGRGDTLLSETLLRRQDGTLVTVLRRVGRVSCPDGRCL-YLACFSNQSERRA 120 Query: 420 TEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQV--WYE 477 E ++L+ + E+ GI +L I S+++R EL+ +P + ++ Sbjct: 121 VESELEKLVAELRATLESSADGILVTDLDGAIRSFNQRFAELWRLPAALLTERNDAGIHD 180 Query: 478 CVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGIN 537 ++ E R +++P LE + + G + Sbjct: 181 WMVREVLDAEGYAARLQAIAQNPL-LEASDLLTLRQGRVLERVTLPQYARGRPIGRVYAF 239 Query: 538 MDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALG 597 D+T+ + L + ++ +A+ D +I +NP E+M+G E +G Sbjct: 240 RDITQRLHDEQGL----KLAARVFEASLDAIFVTDPEFRIVAVNPAGERMTGLAGAELVG 295 Query: 598 VPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGS 657 L + N L +I +A + ++ H G ++ S+ + +G Sbjct: 296 QRLD--RSLRLWANETLDPDIRAALDRSGHWQGEIEQHHADGSTFPCLVSLMRVLDTEGL 353 Query: 658 NIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALV 717 V ++D++E+ + +++ A +DALT L NR ++L ++ + R A++ Sbjct: 354 PFHYVGFVKDLSETVEARQRIEQLAFNDALTGLPNRLRLTERLEFSIELARRENTRFAVL 413 Query: 718 FIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESA 777 FID+DRFK +NDS GH GD +L E+A + LR D +ARLGGDEF LLL A Sbjct: 414 FIDIDRFKHINDSLGHVFGDRVLIEVAQRIRQCLRHVDTIARLGGDEFVLLLHRVESHGA 473 Query: 778 RFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGR 837 +A R++ ++ F +G + S GI L ++ +++ AD A Y K GR Sbjct: 474 ELVARRLLESMAQ-PFELDGLKFSLSCSIGIALYPEDGETLDDLIKNADSAMYHVKEHGR 532 Query: 838 GRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW 897 G Y+ Q ER + + +++ + + + +L W Sbjct: 533 GDCCFYQRQMNVGLLERVRIDHAMR-EALQQGHFWLAYQPQID--LVSGLVIGAEALVRW 589 Query: 898 -SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK-GISISLPLSVAGLS 955 + + F + AL V E +Q A A +S+S+ +S Sbjct: 590 NDPDLGELAPGRFIPIAEETGFIVALGGWVLREAIRQGAHWQAQGIRLSLSVNVSATQFH 649 Query: 956 SATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLSQVGRD 1011 A ++ L + L+ + LPP L L + ++ + E ++ L G R+ + G Sbjct: 650 QANFIDLLAQWLDETGLPPGRLELELTESILIQNVEETLRRLENLVALGVRLAIDDFGTG 709 Query: 1012 LQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVM 1071 LK L +D ++ + D + T + G A L ++ IA V + Sbjct: 710 YSSLAYLKRFPIHKLKIDRSFVCDIPHDESDTAIATAVIGLASVLKLRVIAEGVETDIQR 769 Query: 1072 DTLSGIGVDLIYGEVIADAQPLDLLVNS 1099 L G G + A A + Sbjct: 770 QFLLDAGCHEFQGYLCAPALEPAAFLAR 797 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 52/330 (15%), Positives = 98/330 (29%), Gaps = 41/330 (12%) Query: 288 YAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT- 346 RA + + R +E SA G+ + +G N+ + L Sbjct: 116 SERRAVESELEKLVAELRATLESSADGILVTDLDGAIRSFNQRFAELWRLPAALLTERND 175 Query: 347 --FQQLTWPE--DLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDG 402 E D +++ + + S G L V+L ++ G Sbjct: 176 AGIHDWMVREVLDAEGYAARLQAIAQNPLLEASDLLTLR--QGR---VLERVTLPQYARG 230 Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELY 462 P+ + DI + EQ + EA I+ + + I + + + Sbjct: 231 RPIGRVYAFRDITQRLHDEQGLKLAAR----VFEASLDAIFVTDPEFRIVAVNPAGERMT 286 Query: 463 EIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRH-IRALAN 521 + ++ L + + IR +L ++ E DG Sbjct: 287 GLAGAELVGQRLDRSLRLWA-NETLDPDIRAALDRSGHWQGEIEQHHADGSTFPCLVSLM 345 Query: 522 RVLNKEGEVERLLGINMDMTE----------------------VKQLNEALFQEKERLHI 559 RVL+ EG +G D++E +L E L E Sbjct: 346 RVLDTEGLPFHYVGFVKDLSETVEARQRIEQLAFNDALTGLPNRLRLTERLEFSIELARR 405 Query: 560 TLDSIGEAVVCIDMAMKITFMNPVAEKMSG 589 ++ AV+ ID+ + +N + G Sbjct: 406 --ENTRFAVLFIDID-RFKHINDSLGHVFG 432 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 49/302 (16%), Positives = 96/302 (31%), Gaps = 10/302 (3%) Query: 244 MMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISES--E 301 +A +P L A+ L L +YAFR + + + Sbjct: 193 AARLQAIAQNPLLEASDLLTLRQGRVLERVTLPQYARGRPIGRVYAFRDITQRLHDEQGL 252 Query: 302 THFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQ 361 E S + + E + + N A + G + EL G + Sbjct: 253 KLAARVFEASLDAIFVTDPEFRIVAVNPAGERMTGLAGAELVGQRLDRSLRLWANETLDP 312 Query: 362 QVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTE 421 + + + E ++ +G L+++ V T+G P +++ ++D++E Sbjct: 313 DIRAAL-DRSGHWQGEIEQHHADGSTFPCLVSLMRVLDTEGLPFHYVGFVKDLSETVEAR 371 Query: 422 QVNQQLMERITLANEAGGIGIWEWELKPNIFSW--DKRMFELY----EIPPHIKPNWQVW 475 Q +QL L + + E + + R L+ V+ Sbjct: 372 QRIEQLAFNDALTGLPNRLRLTERLEFSIELARRENTRFAVLFIDIDRFKHINDSLGHVF 431 Query: 476 YECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRH-IRALANRVLNKEGEVERLL 534 + VL E Q + +R EF + + H +A R+L + L Sbjct: 432 GDRVLIEVAQRIRQCLRHVDTIARLGGDEFVLLLHRVESHGAELVARRLLESMAQPFELD 491 Query: 535 GI 536 G+ Sbjct: 492 GL 493 >UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMU1_THISH Length = 862 Score = 845 bits (2185), Expect = 0.0, Method: Composition-based stats. Identities = 175/851 (20%), Positives = 302/851 (35%), Gaps = 65/851 (7%) Query: 301 ETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDL 360 E R +E G+ L+ G + N A+ + GY ++E+ G L D + Sbjct: 19 EGVLRAVLEEMVDGVVLINRLGIIREVNPAVTRIFGYERKEMLGANVSLLVPSPDRERHD 78 Query: 361 QQVEKLIS---GEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINEL 417 Q + + G I ++G + LAVS V+ G F + DI+E Sbjct: 79 QYLRNYLQTGEGRIIGVGRTVHGQRKDGSLFPMELAVSEVK--AGGEHLFAGIVRDISER 136 Query: 418 KRTEQVNQQLMERITLANEAGGIGIWEWELK---PNIFSWDKRMFELYEIPPHIKPNWQV 474 + Q A ++ GI ++ I + ++ IP + Sbjct: 137 HQFHQTL----ALFRRAMDSAYNGIAIADVDAEGERISYANAAFAQITGIPAVDLLGRSL 192 Query: 475 WYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIR-ALANRVLNKEGEVERL 533 ED Q ++ +++ + R DG + + N+ GE+ + Sbjct: 193 TLLACEGEDGQTCTAMVSQ-MRTGGSMRRTLRCQRPDGSLFWNDVTLSPIFNERGEISQC 251 Query: 534 LGINMDMTEVKQLNEALFQEKERLHITLD----SIGEAV--------------------- 568 + + D T +K+ +AL + ++ L ++ ++ E V Sbjct: 252 IAVLADATALKESEQALRRSRDALERQVEARTENLTEVVRQLRREIEERTRVESALRLSE 311 Query: 569 --------------VCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPL 614 ++A + + + G E + I D L Sbjct: 312 QRLANAQRIARLGHWEWEIATGRLYWSAEVYNLLGLGPEFTTPDYERFLEMIPGDDRQRL 371 Query: 615 MENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKM 674 E I E D + C G +H + +G + QD+TE Sbjct: 372 QEAIARCLEHGLPYEIDHRITCPDGSERILHEDGELVYDDEGKPLLLRGTAQDITERHDY 431 Query: 675 LRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHA 734 +L + A+ D +T L NR F+ +L+ L + AL+F+D+D+FK VNDS GH Sbjct: 432 QNRLRHLANFDPVTGLPNRTLFKDRLQHALANATRNQRLVALLFLDMDQFKNVNDSLGHM 491 Query: 735 AGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHF 793 GD LLR+ A +L +R D +AR GGDEF +LL + + E A A R++ A+ F Sbjct: 492 MGDELLRQTAERLLGCVREGDTVARFGGDEFIILLENIEHSEQASLSAERVVQAMRR-PF 550 Query: 794 IWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSE 853 H S GI+L +++ +++ AD A Y +K G Y P E Sbjct: 551 RLGEHEHFCNVSIGISLYPEDDEHPEDLVRHADSAMYLAKAQGGAGYRFYTPDMNTRAME 610 Query: 854 RAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRS 912 R + ++ + ++ Q + R R + +L W E ++ F Sbjct: 611 RLLLQ-NQLHQALELGQFQVHYQPQMDLR--SGRICGVEALVRWQHPERGLVPPAEFIPM 667 Query: 913 FSDPALSHALDRRVFHEFFQQAAKAV--ASKGISISLPLSVAGLSSATLVNDLLEQLENS 970 D L L V ++ +++S+ LS L + L S Sbjct: 668 AEDTGLIEPLGEWVLRTAAREVRGWQDRGLPALNLSVNLSPRQFRHPDLPGMVERVLAES 727 Query: 971 PLPPRLLHLIIPAEAILDH----AESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYL 1026 L L L I I+ +++ ++ G R+ + G LK L Sbjct: 728 GLEAERLELEITERLIIVDLEHTVDTLSRIARLGVRVSIDDFGTGHSSLAYLKRLPVHAL 787 Query: 1027 LLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEV 1086 +D E + + D + + + L ++ IA V L G D + G Sbjct: 788 KIDREFVDGIGQDSDDAAIAEAVIALGRTLRLQVIAEGVETREQASFLREHGCDAVQGFF 847 Query: 1087 IADAQPLDLLV 1097 IA P L Sbjct: 848 IARPMPAGELT 858 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 77/383 (20%), Positives = 136/383 (35%), Gaps = 71/383 (18%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEG---QWLQTNKALCQFLGYSQEELR 343 + +ER ++ FR AM+ + G+A+ + + N A Q G +L Sbjct: 129 IVRDISERHQFHQTLALFRRAMDSAYNGIAIADVDAEGERISYANAAFAQITGIPAVDLL 188 Query: 344 GLTFQQL-TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDG 402 G + L ED V ++ +G + R +G + W + +S + + G Sbjct: 189 GRSLTLLACEGEDGQTCTAMVSQMRTG--GSMRRTLRCQRPDGSLFWNDVTLSPIFNERG 246 Query: 403 TPLYFIAQIEDINELKRTEQVNQQ------------------------------------ 426 IA + D LK +EQ ++ Sbjct: 247 EISQCIAVLADATALKESEQALRRSRDALERQVEARTENLTEVVRQLRREIEERTRVESA 306 Query: 427 ---LMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI-PPHIKPNWQVWYECVLPE 482 +R+ A +G WEWE+ W ++ L + P P+++ + E + + Sbjct: 307 LRLSEQRLANAQRIARLGHWEWEIATGRLYWSAEVYNLLGLGPEFTTPDYERFLEMIPGD 366 Query: 483 DRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLNKEGEVERLLGINMDMT 541 DRQ ++ I L+ P++++ RIT DG R + V + EG+ L G D+T Sbjct: 367 DRQRLQEAIARCLEHGLPYEIDHRITCPDGSERILHEDGELVYDDEGKPLLLRGTAQDIT 426 Query: 542 EVKQLNEALFQE---------------KERLHITLDSIG-----EAVVCIDMAMKITFMN 581 E L K+RL L + A++ +DM + +N Sbjct: 427 ERHDYQNRLRHLANFDPVTGLPNRTLFKDRLQHALANATRNQRLVALLFLDMD-QFKNVN 485 Query: 582 PVAEKMSGWTQEEALGVPLLTVL 604 M G +E L +L Sbjct: 486 DSLGHMMG---DELLRQTAERLL 505 Score = 92.8 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 31/254 (12%), Positives = 70/254 (27%), Gaps = 13/254 (5%) Query: 240 LTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISE 299 V+ + + L R L + + + + + Sbjct: 251 CIAVLADATALKESEQALRRSRDALERQVEARTE-NLTEVVRQLRREIEERTRVESALRL 309 Query: 300 SETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQE------ELRGLTFQQLTWP 353 SE NA + +G L + + LG E E F ++ Sbjct: 310 SEQRLANAQRIARLGHWEWEIATGRLYWSAEVYNLLGLGPEFTTPDYE----RFLEMIPG 365 Query: 354 EDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIED 413 +D + + + + + Y ++ R +G LV +G PL +D Sbjct: 366 DDRQRLQEAIARCLE-HGLPYEIDHRITCPDGSERILHEDGELVYDDEGKPLLLRGTAQD 424 Query: 414 INELKRTEQVNQQLMERITLANEAGGIGIWE-WELKPNIFSWDKRMFELYEIPPHIKPNW 472 I E + + L + + + + ++R+ L + N Sbjct: 425 ITERHDYQNRLRHLANFDPVTGLPNRTLFKDRLQHALANATRNQRLVALLFLDMDQFKNV 484 Query: 473 QVWYECVLPEDRQH 486 ++ ++ Sbjct: 485 NDSLGHMMGDELLR 498 >UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T1A8_JANMA Length = 910 Score = 845 bits (2185), Expect = 0.0, Method: Composition-based stats. Identities = 172/889 (19%), Positives = 313/889 (35%), Gaps = 80/889 (8%) Query: 274 LLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVG-TEGQWLQTNKALC 332 L N++ RA +E+ + + ++ +GQ + +K + Sbjct: 22 ALASPLLNLLRRYATRRRAGFLADPATESLL-----AADKIVWVLRIPDGQVIYASKTVE 76 Query: 333 QFLGYSQEELRGLT--FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWA 390 G S E + + + P D L+ + ++ T + R +G W Sbjct: 77 ALYGSSPERFYANSRLWLENIAPADREPALELLGSILHEPQQTLRL--RINRSDGSPRWI 134 Query: 391 LLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANE------------AG 438 + TDG + DI E + + ++ A Sbjct: 135 EYHARFIPDTDGRSGHVKLIGTDITTRHHLEIALARSNRALRAIHDCEDVISEAVDENAL 194 Query: 439 GIGIWEWELKPNIFSW-------------------DKRMFELYEIPPHIKPNWQVWYECV 479 GI + + + +IP Sbjct: 195 LQGICDVVTATGYRMAWVGILAADGAIIPVGLTQEHQGYLDALKIPLQAGGVGTRAINTA 254 Query: 480 LPEDRQHAEKVIRDSLQSRSPFKLEFRITV------------KDGIRHIRALAN-RVLNK 526 L R + + +P++ E KD I A+ Sbjct: 255 LQTRRPAVANYFANDMSP-TPWRAEAMRRGFYSKLVLPMGDDKDVIGVFNVYASEPDAFD 313 Query: 527 EGEVERLLGINMDMT------EVKQLNEALFQEKERLHITLDSIGEAVVCIDM---AMKI 577 EV L+ + +T + +A ++ AV+ I Sbjct: 314 AQEVALLVSLAQRVTVEIRAHRDRHGRQAAEAALRLRERAIECSANAVIISSAQVPEFAI 373 Query: 578 TFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCR 637 ++NP E+++G+T EA+G +L + I +A + + + + + Sbjct: 374 EYVNPAFERITGYTAAEAIGRSSSFLLRND--HEQAGLYEIRAALAEKREGKAVLRNYRK 431 Query: 638 SGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFE 697 +G + I P+ +G V + D+T ++ L ASHD LT L NRA + Sbjct: 432 NGSLFWNDLYIAPVKDDEGKTTHFVAAMSDITPMKQYETTLHRLASHDVLTGLPNRALLQ 491 Query: 698 KQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVL 757 +L + +V +DLDRFK VND+ GH AGD LL+ ++ + + +R SD + Sbjct: 492 DRLENAIAYSARNGHAVWVVLVDLDRFKFVNDTMGHQAGDVLLKIISDRLQASVRESDTV 551 Query: 758 ARLGGDEFGLLLPDCNVES---ARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDN 814 ARLGGDEF L+LP+C + + RI+ AV +G + S GI + ++ Sbjct: 552 ARLGGDEFVLVLPECGDGPSGYSSDVIQRIMEAVVK-PLTIQGSEFFLSCSMGIAVYPND 610 Query: 815 NHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMML 874 +++ AD+A Y SK GR Y P ER + + + I+ N+L++ Sbjct: 611 GADPTTLLAHADVAMYRSKELGRNNFQFYTPAMNDQALERLRIEGELR-HAIELNELVLH 669 Query: 875 AHGVASPRIPEARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQ 933 + L +L W+ ++ +F + L + V +Q Sbjct: 670 YQPQVDLH--TGAIVGLEALVRWNHPILGMVQPGSFISLAEETGLIIPIGAWVLQTACRQ 727 Query: 934 AAKAVASK--GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE 991 A + I++ LS + A+L+ + + L+ + L R L + + +++ E Sbjct: 728 AKAWQDMGFTQLRIAVNLSARQFTQASLLESIKDTLQETGLEARFLEIELTESSVMADIE 787 Query: 992 S----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLIT 1047 ++ L+ G ++ + G LK D L +D ++ N D +++ Sbjct: 788 RNILTLRDLKSLGVQLSVDDFGTGHSSLAYLKRFPIDTLKIDRSFVRDIAINQDDASIVS 847 Query: 1048 IIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 I A L + IA V MD L G + I G P D + Sbjct: 848 SIISLAHNLKLNVIAEGVETASQMDILRAQGCNEIQGYYFCKPLPSDQI 896 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 52/341 (15%), Positives = 107/341 (31%), Gaps = 11/341 (3%) Query: 159 WVLSESIGALALVPLGLLFKPHYLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTF 218 + A++P+GL + L L + T AI L + Sbjct: 210 AWVGILAADGAIIPVGLTQEHQGYLDALKIPLQAGGVGTRAINTALQTRRPAVANYFAND 269 Query: 219 IIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILL 278 + W A + R + L ++ + + + Sbjct: 270 MSPT-PWRAEAMRRGFYSKLVLPMGDDKDVIGVFNVYASEPDAFDAQEVALLVSLAQRVT 328 Query: 279 PANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVG---TEGQWLQTNKALCQFL 335 + +A + E A+E SA + + E N A + Sbjct: 329 VEIRAHRDRHGRQAAEAALRLRER----AIECSANAVIISSAQVPEFAIEYVNPAFERIT 384 Query: 336 GYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVS 395 GY+ E G + L + L ++ ++ + ++ R Y +NG + W L ++ Sbjct: 385 GYTAAEAIGRSSSFLLRNDHEQAGLYEIRAALAEKREGKAV-LRNYRKNGSLFWNDLYIA 443 Query: 396 LVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWD 455 V+ +G +F+A + DI +K+ E +L L + + N ++ Sbjct: 444 PVKDDEGKTTHFVAAMSDITPMKQYETTLHRLASHDVLTGLPNRALL--QDRLENAIAYS 501 Query: 456 KRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQ 496 R + ++ + + + K+I D LQ Sbjct: 502 ARNGHAVWVVLVDLDRFKFVNDTMGHQAGDVLLKIISDRLQ 542 >UniRef50_A0L914 Diguanylate cyclase/phosphodiesterase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L914_MAGSM Length = 1264 Score = 845 bits (2185), Expect = 0.0, Method: Composition-based stats. Identities = 218/1129 (19%), Positives = 405/1129 (35%), Gaps = 87/1129 (7%) Query: 17 LHLVSLGLVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRHAG-----RMWPGIALS 71 L L LG F+ S + G WF ++++V R + P A + Sbjct: 147 LSLGWLGQAGFVDWAGSTVVHAVGG-----WFSLALLLVIGPRTGRFNPDGSVNPITASN 201 Query: 72 CSLGNIAASILLFS--------TSSLNMTWTTINIVEAV------VGAVLLRKLLPWYNP 117 L + A IL F T SL+ + + + +GA+L Sbjct: 202 LPLTTLGALILWFGWIGFNGGSTLSLDARIGPVVLATCLGAVGGSMGALLWSWWREGRPS 261 Query: 118 LQN-----LADWLRLALGSAIVPPLLGGVLVVLLTPGDDPLRAFLIWV-LSESIGALAL- 170 + + LA + + G+ + PL +L P + +++ + +++GA+ + Sbjct: 262 VLSAINGTLAGLVAVTAGAHALSPLAALGAGLLAAPVALLMENWMLRHGIDDAVGAVPVH 321 Query: 171 --------VPLGLLFKPHYLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVL 222 + + LL H L + + L + L + +L + Sbjct: 322 LGAGVWGTLAVALLGDLHKLGTGLSRLEQLWAQLQGVLAAALVAFVIPWL---------V 372 Query: 223 LMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANI 282 L R P + +S + L + P + Sbjct: 373 LRVINRRFPMR-VTPEQEWQGLNISEHGTQTELSSFLGVLRAQAEGGDLSLRAEVDPFSE 431 Query: 283 MTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTE-GQWLQTNKALCQFLGYSQEE 341 + ++ + + + R + + + ++ GQ N G S Sbjct: 432 VGLIADRYNHVMDAMEAAVAKTRAVFQTAGDAILIIDPHSGQITAHNPMAEAVFGRSSAA 491 Query: 342 LRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTD 401 LT L + + + E +G LA++ H D Sbjct: 492 FAHLTLSDLVVGVTPQRFWLGLHE-----------EGEGRLPDGHTFPLELAITRASHGD 540 Query: 402 GTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFEL 461 G I DI K+ E + R + +G+ + K + + + ++ Sbjct: 541 GEM--LIGTFRDIRARKQAELAIKASEARFRTLFASAALGMALIDAKQRVVDANPALMQM 598 Query: 462 YEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFK-LEFRITVKDGI--RHIRA 518 E+ H + + P+D+Q + ++ RSP + E R + R Sbjct: 599 LELSHH-RDALPPLAQLAHPQDQQEVAARLDAVIEGRSPQENCEVRCLCEARHLTIWTRM 657 Query: 519 LANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKIT 578 + + ++ + ++ I D+T+ ++ EAL +S E+VV + ++ Sbjct: 658 VISPIVLESNLTPMVVVIVEDVTQRRRSEEAL----RLAATVYESTNESVVIFNGEGRVE 713 Query: 579 FMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRS 638 +N ++SG+T E G+ L +L + + + + A +V+ + Sbjct: 714 QVNQAFCRLSGYTAREVRGLELRHLLSARYEKSQ--FDEMAQALALTGHWSGEVMGQRKQ 771 Query: 639 GGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEK 698 G S++ + DGS ++ V D+TE + + A+ D LT L NR F+ Sbjct: 772 GALASERLSLSLVRRPDGSTQNTIAVFTDLTEQKAQEELIWRQANFDPLTSLPNRRLFQD 831 Query: 699 QLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLA 758 +L L + + R AL F+DLDRFK +ND+ GH AGD LL++ A + + +RSSD +A Sbjct: 832 RLHQALAQADRSAGRVALFFLDLDRFKPINDTMGHQAGDELLQKCAERINAAVRSSDTVA 891 Query: 759 RLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQ 817 RLGGDEF ++LP+ N + IA II + + F + + S G+ + D++ Sbjct: 892 RLGGDEFTVILPNIQNGQDLSRIAEGIIKTLTE-PFYLKAGEANISTSVGVAVYPDDSQD 950 Query: 818 AAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHG 877 +M AD A Y +K+ GR V + ER A+ + R + +L ++ Sbjct: 951 DEGLMRAADAALYQAKDHGRNNVQFFTESLNQQILERIALEKGLR-RGLGAGELFLVYQP 1009 Query: 878 VASPRIPEARNLWLISLKLWS-CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAK 936 + R +L W GE++ F + L + V QQ Sbjct: 1010 QV--EVSSGRLSGAEALVRWRLPTGEVVMPDRFIPMAEESGLIVQVGEVVVSLAVQQIRA 1067 Query: 937 AVASK--GISISLPLSVAGLS--SATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES 992 + + IS+ S L + L+ + + P L + I ++ + E Sbjct: 1068 WLDAGFEPPRISINASPKQFHLDGGGLTSILMSTCDAYQISPSRLAVEIVESGLMANPER 1127 Query: 993 ----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITI 1048 + L G + L G L L LD + + + +L+T Sbjct: 1128 SGEILAGLAKLGVEVELDDFGTGYSSLARLSRLQIQALKLDRRFLVGIPEDPQNRILVTA 1187 Query: 1049 IQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 + A+ +G++ IA V M L +G G IA + V Sbjct: 1188 MVQMARGMGIEVIAEGVEDLRQMGFLQDLGCHRAQGFGIARPMEPEAFV 1236 >UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B7KEN2_CYAP7 Length = 1471 Score = 844 bits (2182), Expect = 0.0, Method: Composition-based stats. Identities = 166/828 (20%), Positives = 324/828 (39%), Gaps = 31/828 (3%) Query: 278 LPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGY 337 L + + + + + + ++Y + +A + +L N+ + LG+ Sbjct: 649 LKIVGTHRDITESKEIEEELKQQGELLQTIVDYIPVMLAYIDPNYNFLWVNEEFERILGW 708 Query: 338 SQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLV 397 S EE++ L +P+ + Q V I + + + RNG + + V Sbjct: 709 SLEEIKNLNILAQLYPD--PDERQYVMNYIQSAEEKWE-DFKTRLRNGTTIDTSW--ANV 763 Query: 398 RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKP-NIFSWDK 456 + ++G I +DI K E+ ++ ++ L A +W +++K ++ Sbjct: 764 KLSNGAI---IGIGQDITVRKHIEEALRESEQKYRLLFYANPNPLWVYDVKTLAFLEVNQ 820 Query: 457 RMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHI 516 E Y + + ED + E I + S + ++ +G Sbjct: 821 AAIEHYGYSREEFLGMTL-RDIRPSEDVKILETYIANINPSFNRSGY-WQHRKSNGEIID 878 Query: 517 RALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMK 576 + + + G RL+ + D+TE + + L + + R + ++ + Sbjct: 879 VEITSHGIEFAGRQARLV-LVNDITEQLKAQQKLQESENRFRRAVIDAPLPILIHAEDGE 937 Query: 577 ITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSAD--TSRSAIEQDVVL 634 I +N +++G+T E+ + +G+ ++ ++ E + + Sbjct: 938 IIQVNHAWTELTGYTHEDIP--TIADWTEKAYGERKEIVRSVIDELYKIDGKVEEGEFTI 995 Query: 635 HCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRA 694 ++G + ++S PL L + + + D+TE ++ QL ++A HD LT L NR Sbjct: 996 TIKTGETRIWNFSSAPLGRLADNRRLIMSMALDITERKQAEEQLRHAAVHDQLTGLPNRI 1055 Query: 695 SFEKQLRILLQTVNST-HQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRS 753 ++ ++ AL+FIDLDRFK VNDS GH GD LL +A + + +R Sbjct: 1056 LLLDRIEQAIKRTQQEEKYLFALLFIDLDRFKVVNDSLGHWVGDQLLGAIADKLKACVRP 1115 Query: 754 SDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLID 812 D +AR GGDEF +LL + + A +A +I + F +G+ + S GIT Sbjct: 1116 MDTVARFGGDEFVILLENLTSRTEATKMAQQITDELRSS-FCLQGQDFFISVSIGITFPS 1174 Query: 813 DNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLM 872 A+E++ ADIA Y +K GR R T+++ + + + + + ++ +L+ Sbjct: 1175 SYEESASELLRNADIAMYRAKEKGRARYTIFDSKMHIQATRLLELETNLRL-ALEREELI 1233 Query: 873 MLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFF 931 + + S + + L +L W + +I F + L L V E Sbjct: 1234 VHYQPIVS--LTTGKLLGFEALVRWEHPKKGLISPGEFIPIAEETGLIIPLGEWVLLESC 1291 Query: 932 QQAAKAV----ASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAIL 987 +Q I +S+ LS L L+N L L+ + L + L L I ++ Sbjct: 1292 RQMKAWQKEFSGLDKIRVSVNLSGKQLEYPHLINCLESILKQTGLEGKNLKLEITESMLM 1351 Query: 988 DHAESVQKL----RLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDE 1043 ++ E V L + +I + G + L D L +D + + Sbjct: 1352 NNKEVVSDLLLQIKGKNIQISIDDFGTGYSSLSYLHYLPVDTLKIDRSFVNRMTQLGENF 1411 Query: 1044 MLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQ 1091 ++ I A L M +A V + L +G + G + Sbjct: 1412 EIVEAIINLAHHLQMDVVAEGVETEQHIKQLKQLGCESGQGYFFSKPL 1459 Score = 238 bits (609), Expect = 8e-61, Method: Composition-based stats. Identities = 88/408 (21%), Positives = 180/408 (44%), Gaps = 15/408 (3%) Query: 278 LPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGY 337 + + + + + + + ++ ++ S +G+ + + + + + G+ Sbjct: 390 MMIEGVAIDITETKKTQMALQQAHQCLTFHVDNSPLGVIEWDNDYRVKRWSSQAEKIFGW 449 Query: 338 SQEELRGLTF--QQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVS 395 +EE+ G + Q + EDL+ + +V ++I E + + + R Y + G+++ S Sbjct: 450 KEEEVVGKGWQEWQFVYEEDLDLIVAKVSEIIKKETSRHFVTNRNYTKTGEIIDCKWYNS 509 Query: 396 LVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWD 455 + G L ++ + D++E KR E Q ER+ LA E G IWEW L+ D Sbjct: 510 VQYDQSGEILSILSLVLDVSEQKRAEAALQVSQERLQLALEGSGDSIWEWNLQTGEIYCD 569 Query: 456 KRMFELYEI-PPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPF-KLEFRITVKDGI 513 + ++ P H +++ W V PE E ++D L ++ + LE++I G Sbjct: 570 QSWWQKLGYEPDHETMSYEWWRSQVAPEFLPIHEASLQDYLAGKTEYLTLEYKIQSSSGD 629 Query: 514 RHIRALANRVL--NKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCI 571 + + + ++EG +++G + D+TE K++ E L Q+ E L +D I + I Sbjct: 630 WVWMSARGKSVANDEEGNPLKIVGTHRDITESKEIEEELKQQGELLQTIVDYIPVMLAYI 689 Query: 572 DMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQD 631 D ++N E++ GW+ EE + +L L+ + +M I SA E D Sbjct: 690 DPNYNFLWVNEEFERILGWSLEEIKNLNILAQLYPDPDERQYVMNYIQSA---EEKWE-D 745 Query: 632 VVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLS 679 R+G + + S + +G+ + + QD+T + + L Sbjct: 746 FKTRLRNGTT--IDTSWANVKLSNGAI---IGIGQDITVRKHIEEALR 788 Score = 223 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 68/468 (14%), Positives = 162/468 (34%), Gaps = 50/468 (10%) Query: 273 FLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALC 332 +++ + + + + ++ + +S + +R +E + +G N+A Sbjct: 102 MIVVTVGRQLYLGQLNILKKIKQALKKSRSRYRAIVEEQTELICRFRPDGTLTFVNEAYY 161 Query: 333 QFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALL 392 ++ + E L F L D + L ++ ++ + + E R +G++ W Sbjct: 162 RYFEKTPEYLLEKIFLPLIPFPDQQQVLDNLKS-LNQQKRVITHEHRVIISSGEMRWHQW 220 Query: 393 AVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQ-------------------------- 426 + G + F A DI ELK+ E ++ Sbjct: 221 TNRAIVDRQGKIIEFQAVGRDITELKQIETALRELNEELEQRVEQRTLQLEAQIQERQAV 280 Query: 427 ------LMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVL 480 + E I+++ + + +W + Sbjct: 281 EKALMESEAKYERLVERLPAVIYQFSPTKGKLYCSSYVKSILGYSTDEIDLPWLWINSIH 340 Query: 481 PEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDM 540 PED +++I++ +Q F++E+R+ G H + + + G+ +D+ Sbjct: 341 PEDLPKVKEMIQEFVQ-GKNFEIEYRVKDAQGQWHWILDRSIGRQAADQEMMIEGVAIDI 399 Query: 541 TEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPL 600 TE K+ AL Q + L +D+ V+ D ++ + AEK+ GW +EE +G Sbjct: 400 TETKKTQMALQQAHQCLTFHVDNSPLGVIEWDNDYRVKRWSSQAEKIFGWKEEEVVGKGW 459 Query: 601 LTVLHITFGDNGPLMENIYSADTSRSAIEQDV-VLHCRSGGSYDVHYSITPLSTLDGSNI 659 + D ++ + ++ + ++G D + + G + Sbjct: 460 QEWQFVYEEDLDLIVAKVSEIIKKETSRHFVTNRNYTKTGEIIDCKWYNSVQYDQSGEIL 519 Query: 660 GSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTV 707 + ++ DV+E ++ L +++L++ L+ Sbjct: 520 SILSLVLDVSEQKRAEAALQ---------------VSQERLQLALEGS 552 Score = 205 bits (522), Expect = 9e-51, Method: Composition-based stats. Identities = 68/409 (16%), Positives = 153/409 (37%), Gaps = 13/409 (3%) Query: 281 NIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQE 340 + + +A K + ESE + +E + L + + LGYS + Sbjct: 268 LQLEAQIQERQAVEKALMESEAKYERLVERLPAVIYQFSPTKGKLYCSSYVKSILGYSTD 327 Query: 341 ELRGLTFQQL--TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVR 398 E L + + PEDL K + +++ + G+ + +E R + G W L S+ R Sbjct: 328 E-IDLPWLWINSIHPEDLPKVKEMIQEFVQGK--NFEIEYRVKDAQGQWHWILDR-SIGR 383 Query: 399 HTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRM 458 + DI E K+T+ QQ + +T + +G+ EW+ + W + Sbjct: 384 QAADQEMMIEGVAIDITETKKTQMALQQAHQCLTFHVDNSPLGVIEWDNDYRVKRWSSQA 443 Query: 459 FELYEIPPHIKPNWQV-WYECVLPEDRQHAEKVIRDSLQSRSPFKLEFR--ITVKDGIRH 515 +++ ++ V ED + + ++ + T I Sbjct: 444 EKIFGWKEEEVVGKGWQEWQFVYEEDLDLIVAKVSEIIKKETSRHFVTNRNYTKTGEIID 503 Query: 516 IRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAM 575 + + ++ GE+ +L + +D++E K+ AL +ERL + L+ G+++ ++ Sbjct: 504 CKWYNSVQYDQSGEILSILSLVLDVSEQKRAEAALQVSQERLQLALEGSGDSIWEWNLQT 563 Query: 576 KITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYS--ADTSRSAIEQDVV 633 + + + G+ + + + P+ E + + Sbjct: 564 GEIYCDQSWWQKLGYEPDHET-MSYEWWRSQVAPEFLPIHEASLQDYLAGKTEYLTLEYK 622 Query: 634 LHCRSGGSYDVHYSITPLS-TLDGSNIGSVLVIQDVTESRKMLRQLSYS 681 + SG + ++ +G+ + V +D+TES+++ +L Sbjct: 623 IQSSSGDWVWMSARGKSVANDEEGNPLKIVGTHRDITESKEIEEELKQQ 671 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 51/289 (17%), Positives = 99/289 (34%), Gaps = 7/289 (2%) Query: 268 MPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEG-QWLQ 326 W L + + + + + ESE +R + + + + +L+ Sbjct: 758 TSWANVKLSNGAIIGIGQDITVRKHIEEALRESEQKYRLLFYANPNPLWVYDVKTLAFLE 817 Query: 327 TNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGD 386 N+A + GYS+EE G+T + + ED+ + + S ++ NG+ Sbjct: 818 VNQAAIEHYGYSREEFLGMTLRDIRPSEDVKILETYIANI--NPSFNRSGYWQHRKSNGE 875 Query: 387 VVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWE 446 ++ + + + + DI E + +Q Q+ R A + I Sbjct: 876 IIDVEITSHGIEFAGRQAR--LVLVNDITEQLKAQQKLQESENRFRRAVIDAPLPILIHA 933 Query: 447 LKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQ-SRSPFKLEF 505 I + EL P W E E ++ VI + + + EF Sbjct: 934 EDGEIIQVNHAWTELTGYTHEDIPTIADWTEKAYGERKEIVRSVIDELYKIDGKVEEGEF 993 Query: 506 RITVK-DGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQE 553 IT+K R + + ++ + +D+TE KQ E L Sbjct: 994 TITIKTGETRIWNFSSAPLGRLADNRRLIMSMALDITERKQAEEQLRHA 1042 >UniRef50_C6MMM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MMM5_9DELT Length = 1097 Score = 843 bits (2180), Expect = 0.0, Method: Composition-based stats. Identities = 125/575 (21%), Positives = 223/575 (38%), Gaps = 21/575 (3%) Query: 535 GINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDM---AMKITFMNPVAEKMSGWT 591 + ++ E + EAL Q + +DS ++ D I ++NP E+++G+ Sbjct: 386 ALETEIAEHRDAEEALRQRQR----AIDSSSNGIMITDALELDHPIIYVNPAFERITGYA 441 Query: 592 QEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPL 651 E LG + + +E I A ++ + + G + S++P+ Sbjct: 442 ASEVLGRNPRLLC--SGDREQLGLEVIRVALCELREGHAELRNYRKDGSLFWNALSVSPV 499 Query: 652 STLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTH 711 G V ++ D+TE ++ QL Y ++HD LT L NR ++ L Sbjct: 500 LNAAGEVTNYVGIVNDITERKRYEEQLEYQSNHDGLTGLPNRNLLGDRIGQALTYAERYQ 559 Query: 712 QRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD 771 ++ A+ FIDLD FK +NDS GH GD LL+ A + +RS D +AR GGDEF ++L D Sbjct: 560 RQTAVFFIDLDHFKFINDSLGHDMGDKLLQIAARRLSECVRSIDTVARHGGDEFVIVLSD 619 Query: 772 CN-VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACY 830 E A +A +I AV + V S GI+L + A ++ AD+A Y Sbjct: 620 LAVSEDAAKVARKIQDAVCR-PYQIGEHELVVSCSTGISLYPKDGSDAQVLLKNADVAMY 678 Query: 831 ASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLW 890 +K GR Y R M R ++ ++ ++ R Sbjct: 679 RAKQCGRNNFQFYTGDLNDIVLARLTMEK-YLRRALERDEFLVHYQPKVDLL--SGRITG 735 Query: 891 LISLKLWS-CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV--ASKGISISL 947 + +L W E I +F + L A+ V Q + +++ Sbjct: 736 MEALVRWQSPELGFISPASFIPLAEETGLIVAIGEWVLRTACAQNKAWQDDGLPPMVVAV 795 Query: 948 PLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRI 1003 LS L + + E + L PR + L + ++D + + L+ G ++ Sbjct: 796 NLSPRQFRQEDLADTVHRIAEETGLAPRYIELEVVESLLMDDVDGAVAMLDALKELGVQL 855 Query: 1004 VLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAG 1063 + G + LK D + +D ++ + ++ + A L ++ +A Sbjct: 856 TMDDFGTGYSSLSYLKRFPFDMMKIDQSFVRDITRDPGSAAIVRTVISLAHTLNLRVVAE 915 Query: 1064 PVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 + + L G+ D + G + P Sbjct: 916 GIETEGQLGYLRGLACDEMQGFYFSRPVPAAEFEQ 950 Score = 144 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 45/360 (12%), Positives = 109/360 (30%), Gaps = 12/360 (3%) Query: 176 LFKPHYLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEA 235 ++ + + T + + + + T + M A RL + Sbjct: 281 AVATRNTVQRLTRLTGWTIVATSLLAILAGSMVAFFTSRSITRSVKGCMDFAGRLAGGDL 340 Query: 236 FLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERK 295 + +A + +A L + + + R + Sbjct: 341 AVRMEAGGDNEFGRLATALNCMADELQGHRLLQEERTAELAGANS-ALETEIAEHRDAEE 399 Query: 296 HISESETHFRNAMEYSAIGMALVGT---EGQWLQTNKALCQFLGYSQEELRGLTFQQLTW 352 + + + A++ S+ G+ + + + N A + GY+ E+ G + L Sbjct: 400 ALRQRQR----AIDSSSNGIMITDALELDHPIIYVNPAFERITGYAASEVLGRNPRLLCS 455 Query: 353 PEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIE 412 + L+ + + ++ E R Y ++G + W L+VS V + G ++ + Sbjct: 456 GDREQLGLEVIRVALCELREGHA-ELRNYRKDGSLFWNALSVSPVLNAAGEVTNYVGIVN 514 Query: 413 DINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNW 472 DI E KR E+ + L + + ++ +R + ++ Sbjct: 515 DITERKRYEEQLEYQSNHDGLTGLPNRNLL--GDRIGQALTYAERYQRQTAVFFIDLDHF 572 Query: 473 QVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVER 532 + + + + + I S ++ I V +V R Sbjct: 573 KFINDSLGHDMGDKLLQ-IAARRLSECVRSIDTVARHGGDEFVIVLSDLAVSEDAAKVAR 631 Score = 75.5 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 37/147 (25%), Positives = 54/147 (36%), Gaps = 11/147 (7%) Query: 409 AQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWE---LKPNIFSWDKRMFELYEIP 465 A +I E + E+ +Q A ++ GI + L I + + Sbjct: 386 ALETEIAEHRDAEEALRQRQR----AIDSSSNGIMITDALELDHPIIYVNPAFERITGYA 441 Query: 466 PHIKPNWQVWYECVLPEDRQHA-EKVIRDSLQSRSPFKLEFRITVKDGIRHIRAL-ANRV 523 + DR+ +VIR +L E R KDG AL + V Sbjct: 442 ASEVLGRNP--RLLCSGDREQLGLEVIRVALCELREGHAELRNYRKDGSLFWNALSVSPV 499 Query: 524 LNKEGEVERLLGINMDMTEVKQLNEAL 550 LN GEV +GI D+TE K+ E L Sbjct: 500 LNAAGEVTNYVGIVNDITERKRYEEQL 526 >UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Betaproteobacteria RepID=C6XEG9_METSD Length = 718 Score = 843 bits (2179), Expect = 0.0, Method: Composition-based stats. Identities = 151/685 (22%), Positives = 270/685 (39%), Gaps = 17/685 (2%) Query: 424 NQQLMERITLANEAGGIGIW--EWELKPNIFSWDKRMFELYEIPPHIKP--NWQVWYECV 479 Q + + + + + F+L P + E Sbjct: 26 LQHREHILDSLLKNMEGMAYCCLVDAHWTMLFISDGCFDLTGYRPDELLHNGCTSFEELT 85 Query: 480 LPEDRQHAEKVIRDSLQSRSPFKLEFRITV-KDGIRHIRALANRVLNKEGEVERLLGINM 538 LPEDR + D+L R F++E+RI IR + + N +G+VE L G Sbjct: 86 LPEDRARIRNTVDDALSRRERFEIEYRIMTIDGQIRWVNERGTGIFNPQGQVEALEGFIQ 145 Query: 539 DMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGV 598 D+T+ K +AL + + R ++ E + + NP ++ G+ E L Sbjct: 146 DITQRKLNEQALQEAERRYRNIFENSIEGIFQTSQDGQYINANPALARIYGYESPEELIQ 205 Query: 599 PLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSN 658 L + + + + + ++ R G + + + + G Sbjct: 206 SLNNIAQQLYVQPESRQAFLTLMQLEDRVVNFESQIYRRDGSTIWISENARAVRNDAGKL 265 Query: 659 IGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVF 718 + ++D+TE + + Y A+HD LT L NR + +L + + T + A+VF Sbjct: 266 LYFEGTVEDITERKSYNALIEYQATHDDLTGLPNRTLMQDRLLQAISYADRTASKLAVVF 325 Query: 719 IDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESA- 777 +DLD+FK +NDS GH GD LL +A + S +R SD +AR GGDEF LLL + + A Sbjct: 326 VDLDKFKDINDSMGHFIGDQLLIAMARRLESCIRDSDTVARPGGDEFVLLLSNIHGMDAL 385 Query: 778 RFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGR 837 R++ A+ EG+ V +S GI+L D+ + ++ AD A Y +K G+ Sbjct: 386 SQTLQRVL-ALTSEPCSIEGKDFTVTSSIGISLYPDDGKTSETLLKNADTAMYKAKQEGK 444 Query: 838 GRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW 897 Y + + ER M + + N+ + + R R + +L W Sbjct: 445 NNFQFYTRELNSILVERLEMEYQMR-NALGHNEFHLHYQPKLNLR--TQRITGVEALIRW 501 Query: 898 SCEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQ--AAKAVASKGISISLPLSVAGL 954 +I F + +L + V + + A ++ + +S+ +S Sbjct: 502 HNPRQGLISPNRFIPIAEESSLIEQIGSWVLEKACMESIALSQLSGYDVPVSVNVSPRQF 561 Query: 955 SSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH----AESVQKLRLAGCRIVLSQVGR 1010 + LV ++ L+ + L P LL L I + D + + L+ G ++ + G Sbjct: 562 QQSNLVGNISRVLQETGLKPSLLELEITEGTLADTSPQFIKVLNDLKGLGIKLAIDDFGT 621 Query: 1011 DLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLV 1070 LK D L +D ++ + ++ ++ I LG+ +A V Sbjct: 622 GYSSLGYLKHFPIDNLKIDRSFVMGLESDTANQAILKAIVALGHNLGINLVAEGVETERQ 681 Query: 1071 MDTLSGIGVDLIYGEVIADAQPLDL 1095 D L IG D + G + + P D Sbjct: 682 RDFLLSIGCDEMQGFLFSQPLPFDQ 706 Score = 162 bits (411), Expect = 7e-38, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 90/259 (34%), Gaps = 16/259 (6%) Query: 297 ISESETHFRNAMEYSAIGMA---LVGTEGQWLQTNKALCQFLGYSQEELRG---LTFQQL 350 + E + ++ GMA LV L + GY +EL +F++L Sbjct: 26 LQHREHILDSLLKNM-EGMAYCCLVDAHWTMLFISDGCFDLTGYRPDELLHNGCTSFEEL 84 Query: 351 TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQ 410 T PED + V+ +S + +E R +G + W + + + G Sbjct: 85 TLPEDRARIRNTVDDALS-RRERFEIEYRIMTIDGQIRWVNERGTGIFNPQGQVEALEGF 143 Query: 411 IEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKP 470 I+DI + K EQ Q+ R E GI++ + + + +Y + Sbjct: 144 IQDITQRKLNEQALQEAERRYRNIFENSIEGIFQTSQDGQYINANPALARIYGYESPEEL 203 Query: 471 NWQV----WYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRI-TVKDGIRHIRALANRVLN 525 + V PE RQ +++ E +I I A V N Sbjct: 204 IQSLNNIAQQLYVQPESRQAFLTLMQ---LEDRVVNFESQIYRRDGSTIWISENARAVRN 260 Query: 526 KEGEVERLLGINMDMTEVK 544 G++ G D+TE K Sbjct: 261 DAGKLLYFEGTVEDITERK 279 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 50/238 (21%), Positives = 82/238 (34%), Gaps = 21/238 (8%) Query: 285 MVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGY-SQEELR 343 + + + + E+E +RN E S G+ +GQ++ N AL + GY S EEL Sbjct: 145 QDITQRKLNEQALQEAERRYRNIFENSIEGIFQTSQDGQYINANPALARIYGYESPEELI 204 Query: 344 GLTF-----QQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVR 398 + Q PE L ++ E + E + Y R+G +W VR Sbjct: 205 -QSLNNIAQQLYVQPESRQAFLTLMQL----EDRVVNFESQIYRRDGSTIWISENARAVR 259 Query: 399 HTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRM 458 + G LYF +EDI E K + + L + + S+ R Sbjct: 260 NDAGKLLYFEGTVEDITERKSYNALIEYQATHDDLTGLPNRTLM--QDRLLQAISYADRT 317 Query: 459 FELYEIPPHIKPNWQVWYECVLP--------EDRQHAEKVIRDSLQSRSPFKLEFRIT 508 + ++ + + + E IRDS P EF + Sbjct: 318 ASKLAVVFVDLDKFKDINDSMGHFIGDQLLIAMARRLESCIRDSDTVARPGGDEFVLL 375 >UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KA22_AZOSB Length = 1006 Score = 843 bits (2179), Expect = 0.0, Method: Composition-based stats. Identities = 190/985 (19%), Positives = 340/985 (34%), Gaps = 92/985 (9%) Query: 187 NPRLLFESLLTLAITLTLSWLSMLYLPWPF-TFIIVLLMWSAVRLPRMEAFLIFLTTVMM 245 R L +L + T S P F T + WS P L + Sbjct: 22 RVRALASALSLAFVLGTASAPVCALPPAVFQTHLDPGGDWSGKGHPGEGG----LLGALA 77 Query: 246 VSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFR 305 + A +L + + + LL + ++ RA + + Sbjct: 78 HVVGHDAAHALFSPVARNTLLGLAGTGALLF----GGVLLLRARVRARTRELEGVNRQLG 133 Query: 306 NAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEK 365 ++ + + EG++L + L E L G ++ L + + Sbjct: 134 ATLDAIPDLLFEMDGEGRYLAVHANREAQLQRPVEALLGRRVDEVLPAPAAQTCLAALAE 193 Query: 366 LISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQ 425 G S ++ + W L+V+ + DG P +FI DI +R E Q Sbjct: 194 A--GRHGWSSGQQIEITIDNQPQWFELSVAR-KADDGGPAHFIVLSRDITARRRAEASVQ 250 Query: 426 QLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYE-CVLPE-- 482 +L R+ I + ++ ++ + + V P Sbjct: 251 RL-SRLYATLSQCNQAIVRCASQDDLLRQICHDAVVFGEMKMVWIGLLDERDGMVHPAAA 309 Query: 483 --DRQHAEKVIRDSLQSRSPFK-----------------------LEFRITVKDGIRHIR 517 D IR + S SPF + R Sbjct: 310 YGDGTEYLDGIRIAFDSASPFGRGPSGSALRLDKPVWCQDFANDPATSAWHERGARHGYR 369 Query: 518 ALANRVLNKEGEVERLLGI-------------------NMDM----------TEVKQLNE 548 A A L++ G+V +L + MD+ E +L Sbjct: 370 ASAALPLHRGGKVFGVLNLYAGECHAFDEAAQRLLVEMAMDIDFALDRFEQDAERARLAA 429 Query: 549 ALFQEKERLHITLDSIGEAVVCIDMAMK-ITFMNPVAEKMSGWTQEEALGVPLLTVLHIT 607 A+ +E+ +SI + + +D + ++++P ++SG+ E + P+ +L Sbjct: 430 AIVDSEEKYRELTESINDVIWTVDPETRCFSYVSPAMRRLSGYAPHELIDAPIERLLKPE 489 Query: 608 FGDNGPLMENIYSADTS--------RSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNI 659 + + E + ++V L R GG+ T + Sbjct: 490 YV--AEMRERMALHLAEFHVGKRKSEDYSVEEVELGRRDGGTVWAEVVTTLGLNRRSGRV 547 Query: 660 GSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFI 719 V +D++E R ++ A +D LT L NR+ + + R + A++F Sbjct: 548 EFRAVARDISERRAAEAEIQRLAHYDQLTGLPNRSLVKDRFRYAASLTQRRRGQLAVMFF 607 Query: 720 DLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARF 779 DLD FK +ND+ GH GD LL E+A + S+LR D + RLGGDEF LLPD + E A Sbjct: 608 DLDHFKNINDTLGHDFGDRLLVEVARRLESVLRGGDTVCRLGGDEFVFLLPDTDAEGAAR 667 Query: 780 IATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGR 839 +A +++ AV + + + V S GI + D+ + AD A Y +K GR Sbjct: 668 VAAKLLEAVAQ-PLVLDHQELTVTPSIGIAMYPDDGTDFDTLSRNADAAMYQAKREGRNG 726 Query: 840 VTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-S 898 + A + + + + Q + S + + R + +L W Sbjct: 727 FRFFTEAMQARSTRTLLL-ANALRHALDRGQFSLHYQPQVS--LADGRVVGAEALLRWTH 783 Query: 899 CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV--ASKGISISLPLSVAGLSS 956 E + F L + V E Q+ + + + +++ LS A + Sbjct: 784 PEFGPVSPGEFVPIAESNGLIAQIGEWVLREAVAQSRRWLDEGLPPLVMAVNLSAAQFRN 843 Query: 957 ATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDL 1012 L + + +E + LPP + L + +D +S + L G R+ + G Sbjct: 844 PNLPELVSQVIEEAGLPPHQVELELTEAVAMDDPQSAVRVMDALFARGIRMSIDDFGTGY 903 Query: 1013 QIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMD 1072 LK L +D ++ + D+ +++ I A LGM T+A V +D Sbjct: 904 SSLGYLKRFKVGKLKIDQSFVRDIGDDPDDKAIVSAIIHLAGSLGMLTVAEGVETLDQLD 963 Query: 1073 TLSGIGVDLIYGEVIADAQPLDLLV 1097 L G D + G + P + V Sbjct: 964 FLRQQGCDTVQGYYFSRPLPAEAFV 988 >UniRef50_Q5ZZI1 Sensory box (GGDEF/EAL domain) regulatory protein n=4 Tax=Legionella pneumophila RepID=Q5ZZI1_LEGPH Length = 985 Score = 842 bits (2177), Expect = 0.0, Method: Composition-based stats. Identities = 164/813 (20%), Positives = 308/813 (37%), Gaps = 31/813 (3%) Query: 298 SESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT-WPEDL 356 + E +E + + + E N A Y+ E T L P + Sbjct: 185 KKREKLLTTILEKAGDSVEITNEEAVIQYVNPAFENITLYNAREAMNKTVASLLRSPVED 244 Query: 357 NKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWA-LLAVSLVRHTD-GTPLYFIAQIEDI 414 + +++ + + NT+ + R ++G W + V + G IA +DI Sbjct: 245 AQLFEEINQTLKS-GNTWKGQIRSRKKDGS-YWVAQTIIVPVMDDELGRITQHIAIKQDI 302 Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQV 474 E + ER A GI+ L+ ++ N V Sbjct: 303 TEQVHRFNQLKISEERYRNLMNAVADGIFIHNLQGAFLEVNEAACLSLNYSREELINSYV 362 Query: 475 WYECVLPEDRQHAEKVIRDSLQ--SRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVER 532 W V +++ + + + P E KDG + V N GE + Sbjct: 363 WDIEV-----GFSQESLNQLWENVQKGPINTEGMHRRKDGTTFPVDVRLAVFNATGE-KL 416 Query: 533 LLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQ 592 +L I D+T K+ + +L L+ V+ D I ++N + +G+ + Sbjct: 417 VLAIVRDITLQKRSEATI----RKLTRALEQSPVLVIITDKTGTIEYVNAKVIEQTGYRK 472 Query: 593 EEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLS 652 EE +G + + + + ++ + +++ +SG + V I+P+ Sbjct: 473 EELVGGNTRILR--SGQTPHEIYKTMWEHLANGEEWHGELLNKNKSGEHFWVSAIISPIR 530 Query: 653 TLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQ 712 + + V++DVT+ + L + A+ D LT+L NR +L + + +Q Sbjct: 531 NDNEEITHYLAVMEDVTQKKSYEEMLKHQATFDNLTNLPNRLYAVNKLERAISKSHINNQ 590 Query: 713 RHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC 772 + A++F+DLD FK +NDS GHA GD LL+ L+ LSM+R +D +ARLGGDEF ++L + Sbjct: 591 KLAVLFLDLDEFKQINDSLGHAIGDLLLKALSERFLSMIRQTDTIARLGGDEFMMILENI 650 Query: 773 -NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYA 831 + A IA + + F+ E + V S GI + ++ A +M AD A Y Sbjct: 651 MQDKDAESIAKKCRE-ICSQPFVIESQELLVSTSIGIAIYPEHGKDAKTLMRNADTAMYQ 709 Query: 832 SKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWL 891 SK G+ TV++ + + + + N+L + + + E + + Sbjct: 710 SKIRGKNNWTVFQNTMIEGANNHIRIKTEL-HQAFTRNELYICYQPII--ELKENKVVAA 766 Query: 892 ISLKLWS-CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV--ASKGISISLP 948 +L W I+ + + L + + QA + I +++ Sbjct: 767 EALLRWQNTTLGQINPDQIIPLAEETGMIIPLGYWILDKVCTQAKEWEFITGSKIKVAVN 826 Query: 949 LSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRLAGCRIV 1004 +S L ++ + L+ + L L + A +D + + KL G Sbjct: 827 ISTLQLKQKDFIHKVQLILKRTKLSADSLIFEVTESAFIDDSKFILSQLNKLSDMGIHFS 886 Query: 1005 LSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGP 1064 L G +K+ L +D V N + LI I A+ L + IA Sbjct: 887 LDDFGVGYSFLQYIKSYPFKNLKIDRVFIQGVNTNHNELSLINSIITMARNLKLSVIAEG 946 Query: 1065 VVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 + ++ + + D++ G + D + Sbjct: 947 IETAEQLELMRSMNCDMVQGWYFSKPLSGDKFL 979 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 58/312 (18%), Positives = 111/312 (35%), Gaps = 26/312 (8%) Query: 274 LLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQ 333 L + + + + SE +RN M A G+ + +G +L+ N+A C Sbjct: 289 LGRITQHIAIKQDITEQVHRFNQLKISEERYRNLMNAVADGIFIHNLQGAFLEVNEAACL 348 Query: 334 FLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLA 393 L YS+EEL + Q E + G INT E + ++G + Sbjct: 349 SLNYSREELINSYVWDIEVGFSQESLNQLWENVQKGPINT---EGMHRRKDGTTFPVDVR 405 Query: 394 VSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFS 453 + V + G L +A + DI KR+E ++ +T A E + + + I Sbjct: 406 L-AVFNATGEKL-VLAIVRDITLQKRSEATIRK----LTRALEQSPVLVIITDKTGTIEY 459 Query: 454 WDKRMFELYEIPPHIKPNW--QVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVK- 510 + ++ E ++ P + K + + L + + E K Sbjct: 460 VNAKVIEQTGYRKEELVGGNTRILRSGQTPHE---IYKTMWEHLANGEEWHGELLNKNKS 516 Query: 511 DGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVC 570 + A+ + + N E+ L + D+T+ K E L T D+ Sbjct: 517 GEHFWVSAIISPIRNDNEEITHYLAVMEDVTQKKSYEEMLKH-----QATFDN------L 565 Query: 571 IDMAMKITFMNP 582 ++ ++ +N Sbjct: 566 TNLPNRLYAVNK 577 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 25/145 (17%), Positives = 56/145 (38%), Gaps = 11/145 (7%) Query: 546 LNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLH 605 + ++ L L+ G++V + I ++NP E ++ + EA+ + ++L Sbjct: 180 AKLMNKKREKLLTTILEKAGDSVEITNEEAVIQYVNPAFENITLYNAREAMNKTVASLLR 239 Query: 606 ITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYS-ITPLSTLD-GSNIGSVL 663 + ++ L E I S + + + + G Y V + I P+ + G + Sbjct: 240 -SPVEDAQLFEEINQTLKSGNTWKGQIRSRKKDGS-YWVAQTIIVPVMDDELGRITQHIA 297 Query: 664 VIQDVTES-------RKMLRQLSYS 681 + QD+TE + + Sbjct: 298 IKQDITEQVHRFNQLKISEERYRNL 322 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 842 bits (2176), Expect = 0.0, Method: Composition-based stats. Identities = 141/690 (20%), Positives = 286/690 (41%), Gaps = 22/690 (3%) Query: 416 ELKRTEQVNQQLMERITLANEAGGIGIWEWELK-PNIFSWDKRMFELYEIPPHIKPNWQV 474 E ++ E+V ++ R+ ++ GI + + I ++ Sbjct: 269 ERRQAERVLKETEARLKTIVDSVHTGILVIDPENHRIVDVNELAASSLGRTREEMIGTSC 328 Query: 475 WYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLL 534 E+ + ++ L + E + DG R + +G E LL Sbjct: 329 HRFICPNEEGRCPITDLQQELDNE-----ERDLIRADGSRLPVIKTVSRVVLDGR-EHLL 382 Query: 535 GINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEE 594 +D++ KQ+ +L + +ER + +++ + V+ DM + F++P K+ G T+E+ Sbjct: 383 ESFVDISRRKQVENSLKESEERYRMLVENQADLVIKTDMTGNLLFVSPSFCKLFGQTEEK 442 Query: 595 ALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTL 654 LG LL V+ + + + S ++ ++ + R G + +++ + Sbjct: 443 LLGKALLPVIML--PEQLATAAGMEQMICSDTSYYREYLSPTREGK-RWIGWALRCIFNQ 499 Query: 655 DGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRH 714 G + + +D+T+ + + A HD +T L NR +L++ + Q Sbjct: 500 SGQAEAIIGMGRDITDRKTAESTIEQLAYHDPVTGLPNRTLLHDRLQLAINRAERDSQGV 559 Query: 715 ALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNV 774 A++F+DLDRFKA+NDS GHA GD LLR + + +L +RSSD +ARLGGDEF +L+ + Sbjct: 560 AILFLDLDRFKAINDSLGHAMGDQLLRLVGNRLLDCVRSSDTVARLGGDEFVVLISALDN 619 Query: 775 ESAR-FIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASK 833 + A + +I+ + + + + +S GI+L + A E++ AD+A Y +K Sbjct: 620 DHAVGSVVMKILEQLCE-PYQIDDHEVYTSSSIGISLFPRDGRDAEELLKNADMAMYQAK 678 Query: 834 NGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLIS 893 GR + P+ +ER + + R ++ + ++ R + + Sbjct: 679 EAGRNTCHFFSPELNMRATERLLLESTMR-RALEREEFFLVYQPQMELR--SGHIAGIEA 735 Query: 894 LKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV--ASKGISISLPLS 950 L W + ++ F + L L V E +QA + + +++ +S Sbjct: 736 LLRWRHPDLGVVPPNNFIPIAEETGLIVPLGEWVLAEACRQAVRWQQEGQPPLRMAVNVS 795 Query: 951 VAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLS 1006 L + + L + L P LL L + A++++ E ++++L+ G + + Sbjct: 796 ARQFRQRNLGLRIEKILMETGLDPALLELELTESAVMENPEEAILTLRQLKKMGITLSID 855 Query: 1007 QVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVV 1066 G + LK D L +D +V + D + I A + + +A + Sbjct: 856 DFGTGYSSLSHLKHFPIDRLKIDRSFVKHVTRDHNDATIAEAIIALAHSMKLTVVAEGIE 915 Query: 1067 LPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 M+ + D + G ++ + Sbjct: 916 HSEQMEFMHQRHCDTMQGYYLSRPVTAEEF 945 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 67/418 (16%), Positives = 149/418 (35%), Gaps = 41/418 (9%) Query: 213 PWPFTFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLP 272 P + L A+ + I L + ++L A S T+L + M + Sbjct: 202 PKAIPELFPLDHL-ALEMGVESYIGIPLVSSRRITLGPMAVFSRRPIRETHLAASMLQVF 260 Query: 273 FLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTE-GQWLQTNKAL 331 + R + + E+E + ++ G+ ++ E + + N+ Sbjct: 261 AV--------RAASELERRQAERVLKETEARLKTIVDSVHTGILVIDPENHRIVDVNELA 312 Query: 332 CQFLGYSQEELRGLTFQQLTWPEDLNKD-LQQVEKLISGEINTYSMEKRYYNRNGDVVWA 390 LG ++EE+ G + + P + + + +++ + E E+ +G + Sbjct: 313 ASSLGRTREEMIGTSCHRFICPNEEGRCPITDLQQELDNE------ERDLIRADGSRLPV 366 Query: 391 LLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPN 450 + VS V + + DI+ K+ E ++ ER + E + + ++ N Sbjct: 367 IKTVSRVVLDGRE--HLLESFVDISRRKQVENSLKESEERYRMLVENQADLVIKTDMTGN 424 Query: 451 IFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVK 510 + +L+ + +LPE A + + S + + E+ + Sbjct: 425 LLFVSPSFCKLFGQTEEKLLGKALLPVIMLPEQLATA-AGMEQMICSDTSYYREYLSPTR 483 Query: 511 DGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQ---------------EKE 555 +G R I + N+ G+ E ++G+ D+T+ K + Q + Sbjct: 484 EGKRWIGWALRCIFNQSGQAEAIIGMGRDITDRKTAESTIEQLAYHDPVTGLPNRTLLHD 543 Query: 556 RLHITL-----DSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITF 608 RL + + DS G A++ +D+ + +N G +G LL + + Sbjct: 544 RLQLAINRAERDSQGVAILFLDLD-RFKAINDSLGHAMGDQLLRLVGNRLLDCVRSSD 600 >UniRef50_Q1GXN7 Diguanylate cyclase/phosphodiesterase n=3 Tax=Proteobacteria RepID=Q1GXN7_METFK Length = 951 Score = 842 bits (2175), Expect = 0.0, Method: Composition-based stats. Identities = 164/826 (19%), Positives = 311/826 (37%), Gaps = 28/826 (3%) Query: 282 IMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEE 341 ++ + A + E E +R + S + + + + G E Sbjct: 121 LLGRDLTARFDMLDKLQEQELQYRQLVMNSPDIFIRYDQDCRRIFLSDGYEAVFGVPAAE 180 Query: 342 LRGLTFQQ-----LTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSL 396 G + + PED L++V + SGE +E + V L Sbjct: 181 ALGRKPTEVWGRPMMRPEDFEARLREVMR--SGEEQEIELEWVG---DEHYVCQSLHAVP 235 Query: 397 VRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDK 456 R+ G + DI+ ++R E+ ++ + E +W +L + + + Sbjct: 236 ERNVKGEIKGVLTITRDISHIRRVERELRKRERYQSALIENFPFVVWLKDLNSKLLAANS 295 Query: 457 RMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHI 516 E + + + ++ +D + + + LQS P ++T ++G + Sbjct: 296 AYAEFAGVASKDELEGKTDFDLFPLQDARTHVEGDKRVLQSGQPSHSVLQVTKRNGEKAW 355 Query: 517 RALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMK 576 + +G+V +G D+T++KQ E L Q + L +D+ + ++ D+ + Sbjct: 356 IEAYKSPMVVDGKVMGTVGFFRDITDIKQNEEKLIQRERELQSLIDNTPDTIIRYDLNAR 415 Query: 577 ITFMN-PVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLH 635 ++N P +++ G +G + E I S + ++ Sbjct: 416 RLYVNTPKLKRI-GIESGRLIGTTPSE--YPGGEAYMKYEEKIRGVINSATPDFLELHGK 472 Query: 636 CRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRAS 695 +G ++ +H I P G IG + V +D+TE + ++ Y A +DALT L NR Sbjct: 473 ADNGNTWFIHVRIVPEFGEQGQVIGVLAVERDITELMEYRERIHYLAYYDALTGLPNRTL 532 Query: 696 FEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSD 755 F ++ +L + QR L+ +DLDRFK VND+ GH AGD LL +A + + +RS D Sbjct: 533 FADRVNQVLADASWHEQRFGLMMLDLDRFKEVNDTLGHQAGDDLLVAVAQRLNASVRSYD 592 Query: 756 VLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDN 814 +ARL GDEF +LLP+ N + IA +I + F+ + + S GI + D+ Sbjct: 593 TIARLSGDEFAILLPELRNPDDLATIARKINDEIAK-PFLIHDKELFISTSIGIAIYPDD 651 Query: 815 NHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMML 874 A + AD+A Y +KN GR Y + + SE + + +K + + Sbjct: 652 GDDRATLFKSADVAMYHAKNYGRNNYQFYSRELGSKASEYIML-GASIRQALKNAEFELF 710 Query: 875 AHGVASPRIPEARNLWLISLKLWS-CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQ 933 + +L W + ++ F + + L + V E Sbjct: 711 YQPQVDLM--SGEIVGAEALLRWRNPQLGVVMPDRFIKVAEESGLIVEIGEWVLREACSA 768 Query: 934 A----AKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH 989 +S+++ LS L+ + + L + P L L I +L+ Sbjct: 769 VVCLNRYRPDDHPLSMAVNLSSRQFLYNDLLASVKDILAETGCKPEWLKLEITESLLLED 828 Query: 990 AE----SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEML 1045 ++ ++ + G I + + L + +D ++ L Sbjct: 829 SQEIISTLSTFKEMGITISIDDFCTGYSAMSYLGQFPISQVKIDRSFVRDIAAKQDKLEL 888 Query: 1046 ITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQ 1091 IT I A L ++ +A V + L G + G Sbjct: 889 ITAIIRIAHALRLELVAEGVESKQQANLLKIQGCTIAQGYFFGKPM 934 Score = 192 bits (490), Expect = 5e-47, Method: Composition-based stats. Identities = 56/382 (14%), Positives = 131/382 (34%), Gaps = 15/382 (3%) Query: 302 THFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQ 361 A+ + + + + N A C+ LGYS++ L ++ + D Sbjct: 18 DMLSFAINRIREIVLVCDADARICLANLAACEVLGYSEKLLLQMSATDIITHLDSVGWKN 77 Query: 362 QVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTE 421 +L + + E N+ GD V + + D Y + D+ Sbjct: 78 DWRRL--QQQHVMVQETSLRNQAGDTVPVEIQSNYFVDADQA--YCVLLGRDLTARFDML 133 Query: 422 QVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYEC--- 478 Q+ + ++ ++ +P + Sbjct: 134 DKLQEQELQYRQLVMNSPDIFIRYDQDCRRIFLSDGYEAVFGVPAAEALGRKPTEVWGRP 193 Query: 479 -VLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGIN 537 + PED E +R+ ++S ++E + A N +GE++ +L I Sbjct: 194 MMRPED---FEARLREVMRSGEEQEIELEWVGDEHYVCQSLHAVPERNVKGEIKGVLTIT 250 Query: 538 MDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGW-TQEEAL 596 D++ ++++ L + + +++ V D+ K+ N + +G +++E Sbjct: 251 RDISHIRRVERELRKRERYQSALIENFPFVVWLKDLNSKLLAANSAYAEFAGVASKDELE 310 Query: 597 GVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDG 656 G + + D +E S + + R+G + +P+ +DG Sbjct: 311 GKTDFDLFPL--QDARTHVEGDKRVLQSGQPSHSVLQVTKRNGEKAWIEAYKSPMV-VDG 367 Query: 657 SNIGSVLVIQDVTESRKMLRQL 678 +G+V +D+T+ ++ +L Sbjct: 368 KVMGTVGFFRDITDIKQNEEKL 389 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 34/259 (13%), Positives = 79/259 (30%), Gaps = 10/259 (3%) Query: 424 NQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPED 483 ++ ++ A + + I + E+ + + Sbjct: 13 IATQIDMLSFAINRIREIVLVCDADARICLANLAACEVLGYSEKLLLQMSATDIITHLDS 72 Query: 484 RQHAEKVIRDSLQSRSPFKLEFRITV-KDGIRHIRALANRVLNKEGEVERLLGINMDMTE 542 K LQ + E + + +N ++ + LLG D+T Sbjct: 73 VG--WKNDWRRLQQQHVMVQETSLRNQAGDTVPVEIQSNYFVDADQAYCVLLG--RDLTA 128 Query: 543 VKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLT 602 + + L +++ + + + + + D + F++ E + G EALG Sbjct: 129 RFDMLDKLQEQELQYRQLVMNSPDIFIRYDQDCRRIFLSDGYEAVFGVPAAEALGRKPTE 188 Query: 603 VLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDV--HYSITPLSTLDGSNIG 660 V + S E ++ G + V P + G G Sbjct: 189 VWGRPMMRPEDFEARLREVMRSGEEQEIELEWV---GDEHYVCQSLHAVPERNVKGEIKG 245 Query: 661 SVLVIQDVTESRKMLRQLS 679 + + +D++ R++ R+L Sbjct: 246 VLTITRDISHIRRVERELR 264 Score = 94.4 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 30/249 (12%), Positives = 74/249 (29%), Gaps = 8/249 (3%) Query: 277 LLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTN-KALCQFL 335 ++ + + + + + E ++ ++ + + + L N L + Sbjct: 369 VMGTVGFFRDITDIKQNEEKLIQRERELQSLIDNTPDTIIRYDLNARRLYVNTPKLKRI- 427 Query: 336 GYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVS 395 G L G T + E K +++ +I+ + +E NG+ + + + Sbjct: 428 GIESGRLIGTTPSEYPGGEAYMKYEEKIRGVINSATPDF-LELHGKADNGNTWFIHVRIV 486 Query: 396 LVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWD 455 G + +A DI EL + L L + + N D Sbjct: 487 PEFGEQGQVIGVLAVERDITELMEYRERIHYLAYYDALTGLPNRTLFAD---RVNQVLAD 543 Query: 456 KRMFEL-YEIPPHIKPNWQVWYECV-LPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGI 513 E + + ++ + + V + S + R++ + Sbjct: 544 ASWHEQRFGLMMLDLDRFKEVNDTLGHQAGDDLLVAVAQRLNASVRSYDTIARLSGDEFA 603 Query: 514 RHIRALANR 522 + L N Sbjct: 604 ILLPELRNP 612 >UniRef50_A4ACX6 Sensory box/GGDEF/EAL family protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4ACX6_9GAMM Length = 793 Score = 841 bits (2174), Expect = 0.0, Method: Composition-based stats. Identities = 152/798 (19%), Positives = 291/798 (36%), Gaps = 37/798 (4%) Query: 305 RNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEEL-RGLT--FQQLTWPEDLNKDLQ 361 + IG Q + L +EL G+ Q+ ED+ Sbjct: 5 EAVFLEAGIGTWRWDASSGEFQLSDDGIAMLQVRADELPLGVDTIIGQILD-EDVAGFQS 63 Query: 362 QVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTE 421 + +LI+ ++ R +GD+ W D + + + D+ + E Sbjct: 64 AMAELITAP-GLIEVDFRALLDDGDIRWYRAIGRSYASPDASVTHAAGVLLDVTTQRSAE 122 Query: 422 QVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLP 481 + + + I + + + + V P Sbjct: 123 -------QYYDAFFQQPNGMHLVASIDGEIRLTNSAWQLVLGHGDAELQGQNLL-DLVHP 174 Query: 482 EDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMT 541 EDR+ + Q E R +DG + A + +E + + D++ Sbjct: 175 EDREATLAEMGKLSQGMYTLYFENRYRHRDGSYRVIAWSAATAERESVI---CAVGRDIS 231 Query: 542 EVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLL 601 + LFQ + GE ++ D +I +N +++G+++E+A+G P Sbjct: 232 QEHAARRGLFQ----AAAVFKNSGEGILISDKDGRIRDVNAAFSRITGYSREDAIGQPTS 287 Query: 602 TVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGS 661 + + +G +++ ++ +SG + +I+ + DG G Sbjct: 288 LLR--SGRHDGDFYADMWQTLQRDGVWRGEIWNRRKSGTVFPELLTISKIDGPDG---GF 342 Query: 662 VLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDL 721 + + D+++ ++ QL A +D LT+L NR + L ++ A+ F+D+ Sbjct: 343 MAIFTDISQLKETEEQLQKLAHYDPLTNLPNRFLVNECLEHSIRRAQRRSDHLAVFFLDI 402 Query: 722 DRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN-VESARFI 780 D FK +NDS GH AGD LL+ A+ + ++LR D + R+GGDEF ++L D + + A I Sbjct: 403 DSFKNINDSLGHFAGDKLLKTTANRLKALLRDDDSVGRIGGDEFLMVLDDISTPDDATHI 462 Query: 781 ATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRV 840 A +II A+ I EGR V AS GI++ ++ A +MS AD A Y +K+ GR Sbjct: 463 AEKIIGALRK-PMILEGRSISVSASIGISIYPEDGQTAETLMSNADAAMYNAKDQGRDTF 521 Query: 841 TVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSC- 899 Y + + + + + + + L L L W Sbjct: 522 RFYSEHLTRQAFQNVLIDSALR-EAVSRQEFRLAFQPQVN--TDNGSLLGLEVLLRWHHL 578 Query: 900 EGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKG--ISISLPLSVAGLSSA 957 + F L + V + Q ++ +A +++ +S + Sbjct: 579 TLGTVSPSQFIPQAERTGLIRDIGHWVLEQSCLQGSRWIAEGLQFGHLAVNVSAPQFRAE 638 Query: 958 TLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQ 1013 V + + L ++ PP L L + ++ E + +LR G + G Sbjct: 639 DFVAQVRKVLADTEFPPEKLELELTESVLVHDTEKLIENMHELRALGVMFAIDDFGTGYS 698 Query: 1014 IFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDT 1073 + LK D L LD ++ + D ++ + + +G+ IA + Sbjct: 699 SLSYLKRMPIDRLKLDKSFVDHIVSDDSDRIIAGAVLALGKAMGLPVIAEGIEQEAQARV 758 Query: 1074 LSGIGVDLIYGEVIADAQ 1091 L +G G + Sbjct: 759 LQSLGCKHFQGYLYGRPM 776 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 54/150 (36%), Gaps = 4/150 (2%) Query: 293 ERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTW 352 + + S G+ + +G+ N A + GYS+E+ G L Sbjct: 232 QEHAARRGLFQAAAVFKNSGEGILISDKDGRIRDVNAAFSRITGYSREDAIGQPTSLLRS 291 Query: 353 PEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIE 412 + + + + E ++G V LL +S + DG F+A Sbjct: 292 GRHDGDFYADMWQTLQ-RDGVWRGEIWNRRKSGTVFPELLTISKIDGPDG---GFMAIFT 347 Query: 413 DINELKRTEQVNQQLMERITLANEAGGIGI 442 DI++LK TE+ Q+L L N + Sbjct: 348 DISQLKETEEQLQKLAHYDPLTNLPNRFLV 377 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 84/255 (32%), Gaps = 12/255 (4%) Query: 298 SESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLN 357 +E ++ + + +G+ TN A LG+ EL+G L PED Sbjct: 119 RSAEQYYDAFFQQPNGMHLVASIDGEIRLTNSAWQLVLGHGDAELQGQNLLDLVHPEDRE 178 Query: 358 KDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINEL 417 L ++ KL G Y E RY +R+G + + T A DI++ Sbjct: 179 ATLAEMGKLSQGMYTLY-FENRYRHRDGSYRVIAWSAA----TAERESVICAVGRDISQ- 232 Query: 418 KRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYE 477 E ++ + + + G GI + I + + Sbjct: 233 ---EHAARRGLFQAAAVFKNSGEGILISDKDGRIRDVNAAFSRITGYSREDAIGQPTSLL 289 Query: 478 CVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGIN 537 D + +LQ ++ E K G L ++ G + I Sbjct: 290 RSGRHD-GDFYADMWQTLQRDGVWRGEIWNRRKSGTVFPELLTISKID--GPDGGFMAIF 346 Query: 538 MDMTEVKQLNEALFQ 552 D++++K+ E L + Sbjct: 347 TDISQLKETEEQLQK 361 >UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9X9_TOLAT Length = 1101 Score = 841 bits (2173), Expect = 0.0, Method: Composition-based stats. Identities = 150/745 (20%), Positives = 280/745 (37%), Gaps = 28/745 (3%) Query: 373 TYSMEKRYYNRNGDVVWALLA-----VSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQL 427 YS ++ ++A L ++LV G + F+ + + + Q+ Sbjct: 355 RYSGWHILVQQDRAEIYAPLHNLVYWITLVVFFAGLLVIFVVSLLWRQQQYTNQLELQRQ 414 Query: 428 M----ERITLANEAGGIGIWEWELKPN-IFSWDKRMFELYEIPPHIKPNWQVWYECVLPE 482 + E G+ + ++ ++ +L + Sbjct: 415 TSEKDRLLKHFFELPLFGMAITHGQTGHWIRFNHQLSDLLGYSHSEMAEHTLLSLTANEY 474 Query: 483 DRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLNKEGEVERLLGINMDMT 541 + + + + E ++ KDG + ++ V + + ++ + D++ Sbjct: 475 QEADIAAMYQMTQDLCDGYLCEKQLRRKDGQLIYVNVDTRCVRTADRNIAFIISVIEDIS 534 Query: 542 EVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLL 601 K+ L Q D+ E ++ D +I +NP ++ G++Q E G + Sbjct: 535 SQKENEAILRQS----ATVFDNTREGIMITDKNAQIIRVNPAFAELFGFSQHELQGKTPV 590 Query: 602 TVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGS 661 + ++I + + + ++ + + SI+ + Sbjct: 591 IFK--SGKHTHEFYQHIRDSLNTSAFWRGEIWNRRKDNHIIPLICSISAVRNDKQQLTHY 648 Query: 662 VLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDL 721 V V D+++ + +L++ A HD LT L NR L + H R AL+ +DL Sbjct: 649 VSVYSDISKLKASEAKLAHLAHHDPLTQLPNRTLLTINLSHAIDLAVRNHHRIALLMLDL 708 Query: 722 DRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNV-ESARFI 780 DRFK VNDS GH GDALL+E+A + +R SD + RLGGDEF +L+ Sbjct: 709 DRFKDVNDSFGHQIGDALLQEVARRLRRRVRISDTICRLGGDEFTVLIEGNPALHDVEHF 768 Query: 781 ATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRV 840 A I+ + D + GR +GAS GI+L ++ E++ QAD A Y +K GR Sbjct: 769 AEDILQLLKDPFSLPNGREVIIGASIGISLYPEHGQTPKELLQQADAAMYRAKAHGRSCF 828 Query: 841 TVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWS-C 899 + + A +R + + R ++ N+L + I R + +L W Sbjct: 829 RYFSDELTRAAEQRLDLEV-RLQRALRLNELCLYFQPQID--ISSNRIIGAEALVRWQDP 885 Query: 900 EGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV--ASKGISISLPLSVAGLSSA 957 +I F + L L V E +Q + I++++ +S ++ Sbjct: 886 AHGLISPAQFIPVAEETGLIKQLGEWVLLEACRQGKEWQQKGLPAINLAVNISPVQFRNS 945 Query: 958 TLVNDLLEQLENSPLPPRLLHLIIPAEAILDH----AESVQKLRLAGCRIVLSQVGRDLQ 1013 ++ + L+ + P LL L + A++ H E + LR G R+ + G Sbjct: 946 NILESVFNALKQTGYPASLLELELTESALMTHENEAVEILSALRKYGIRLAIDDFGTGYS 1005 Query: 1014 IFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDT 1073 LK D L +D ++ D + I A L +K +A V + Sbjct: 1006 SLAYLKRFPLDVLKIDKSFVDDIPHKKDDMEIAAAIVAMAHTLRLKVLAEGVETEEQLTF 1065 Query: 1074 LSGIGVDLIYGEVIADAQPLDLLVN 1098 L G D G +++ P D Sbjct: 1066 LKEQGCDCYQGYLMSPPVPADQFEQ 1090 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 65/353 (18%), Positives = 130/353 (36%), Gaps = 34/353 (9%) Query: 263 YLMSHMPWLPFLLILLPANIM--TMVMYAFRAERKHISESETHFRNAMEYSAIGMALV-G 319 Y ++ + + LL++ +++ ++ SE + ++ E GMA+ G Sbjct: 379 YWITLVVFFAGLLVIFVVSLLWRQQQYTNQLELQRQTSEKDRLLKHFFELPLFGMAITHG 438 Query: 320 TEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKR 379 G W++ N L LGYS E+ T LT E D+ + ++ + Y EK+ Sbjct: 439 QTGHWIRFNHQLSDLLGYSHSEMAEHTLLSLTANEYQEADIAAMYQMTQDLCDGYLCEKQ 498 Query: 380 YYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGG 439 ++G +++ + VR D + I+ IEDI+ K E + +Q + Sbjct: 499 LRRKDGQLIYVNVDTRCVRTADRNIAFIISVIEDISSQKENEAILRQSA----TVFDNTR 554 Query: 440 IGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQV--WYECVLPEDRQHAEKVIRDSLQS 497 GI + I + EL+ H + + + IRDSL + Sbjct: 555 EGIMITDKNAQIIRVNPAFAELFGFSQHELQGKTPVIFKSGKHTHE---FYQHIRDSLNT 611 Query: 498 RSPFKLEFRITVKDGIRH-IRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQ---- 552 + ++ E KD + + V N + ++ + + D++++K L Sbjct: 612 SAFWRGEIWNRRKDNHIIPLICSISAVRNDKQQLTHYVSVYSDISKLKASEAKLAHLAHH 671 Query: 553 -------EKERLHITLDSIGE---------AVVCIDMAMKITFMNPVAEKMSG 589 + L I L + A++ +D+ + +N G Sbjct: 672 DPLTQLPNRTLLTINLSHAIDLAVRNHHRIALLMLDLD-RFKDVNDSFGHQIG 723 >UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=2 Tax=Rhodocyclaceae RepID=A1K4Z0_AZOSB Length = 880 Score = 841 bits (2173), Expect = 0.0, Method: Composition-based stats. Identities = 133/714 (18%), Positives = 259/714 (36%), Gaps = 23/714 (3%) Query: 396 LVRHTDGTPLY-FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSW 454 V G + + D ++ E + ++++ + + + + Sbjct: 163 AVSRQTGIVARNVMGFVLDAQPMRAAE--MWERLDQLAIVALTLPPA-----QRERVVNL 215 Query: 455 DKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIR 514 + + P + + + D Q + +R+ + Sbjct: 216 IAHGRIILDRKPVLDTITRDILALPTGARAESVIHAYVDGYQHATDRAHTYRVLLFVVAL 275 Query: 515 HIR-ALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDM 573 + L +L + L G N + E Q E + E + D Sbjct: 276 GLAGYLMIAILRLQRTSLALAGANEHLEERIQTLRLTESELHLYANVFTNASEGMAITDA 335 Query: 574 AMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVV 633 +I +NP ++G++ EE G + + + +++ R + ++ Sbjct: 336 QARIVAVNPAFTDITGYSIEEIHGRTPAVL--ASGRQDAAFYREMWATLGKRGQWQGEIW 393 Query: 634 LHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANR 693 RSG Y SIT ++ DG + + D+T+ ++ ++ + A HDALT L NR Sbjct: 394 NRRRSGEIYPEWLSITAITEGDGGVSHYIGIFSDITDRKESEARIRHLAHHDALTGLPNR 453 Query: 694 ASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRS 753 + +L + + A++F+DLDRFK +ND+ GH GD LLR++ L +R Sbjct: 454 LLLQDRLGQAILKARRNSTQAAVLFLDLDRFKTINDTLGHEIGDGLLRQVTQRCLGAVRE 513 Query: 754 SDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLID 812 +D +AR GGDEF ++LPD + + A IA +I++A+ + V S GI L Sbjct: 514 TDTVARQGGDEFVIVLPDLEHGQDAGTIARKILAALTE-PCRLGPHELTVTGSIGIALYP 572 Query: 813 DNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLM 872 + + ++ AD A Y +K GR Y + + + N+L Sbjct: 573 GDGADPSMLLRNADAAMYRAKADGRNGFQFYAADMNTHSLGELLLEHQLRG-ALDRNELR 631 Query: 873 MLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFF 931 + + + +L W + ++ F + + L + V E Sbjct: 632 LYFQPKVN--AADGCIEGCEALLRWQHPDLGLLAPGRFVPAAEESGLIVPIGEWVLREAC 689 Query: 932 QQAAKA--VASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH 989 +Q + +++ LS + +V + E L LP +L L + ++ Sbjct: 690 RQLRAWIDAGLAPVPVAVNLSGQQFAHQDIVALVREALAEHRLPAPMLELELTETMLMRD 749 Query: 990 AES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEML 1045 E + +LR G + + G L+ + L +D +++ D + Sbjct: 750 LERTIATLAELRAMGVTLAIDDFGTGYSSLAYLRQFDVNALKIDRSFVHDIRPGSSDGKI 809 Query: 1046 ITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNS 1099 T + A LG+ A V L+ G D + G + +P + Sbjct: 810 ATAVIALAHNLGLTVTAEGVETAAQQHFLARHGCDQLQGFLFGQPEPAEAFAQR 863 >UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IR9_DECAR Length = 952 Score = 840 bits (2172), Expect = 0.0, Method: Composition-based stats. Identities = 141/694 (20%), Positives = 260/694 (37%), Gaps = 30/694 (4%) Query: 420 TEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECV 479 E ++ R+ A ++ S +K L P + + Sbjct: 269 REMKLERS--RLQALLSAIPDPVFVKNANGVFMSCNKAFERLLGAPEKSILGKTDY-DFF 325 Query: 480 LPEDRQHAEKVIRDSLQSRSPFKLEFRIT-VKDGIRHIRALANRVLNKEGEVERLLGINM 538 + + R + + P E + DG + L +G+ LGI Sbjct: 326 DKDLADFFREKDRAATAAGRPLSNEEWLEFAADGYSGLFETTKTPLYLDGQAIGTLGIAH 385 Query: 539 DMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGV 598 D+T K++ L + A++ D I +N + +G+ EE +G Sbjct: 386 DITRRKRIEADL----RLAAAAFE-SQTAMLVTDANGVILRVNQAFLRDTGYAVEECVGQ 440 Query: 599 PLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSN 658 + + + + ++ + S + ++ + G Y +I+ + G Sbjct: 441 TPRILR--SGRHDPAFYQKMWESIRSSGVWQGEIWDRRKDGSIYPKWLTISAVLGDSGEV 498 Query: 659 IGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVF 718 + + QDV+E + ++ A +D +T L NR +++L ++ ++ L+F Sbjct: 499 THYIGLHQDVSERKLAESRIHQLAYYDQVTGLPNRILLQERLSQVMAKCRASSNYGVLLF 558 Query: 719 IDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE--- 775 +DLD FK +ND+ GH GD LL+++ ++ R SD +ARLGGDEF +++ + + Sbjct: 559 VDLDNFKTLNDTLGHNVGDLLLKQVGEVLRRCSRESDTVARLGGDEFAVIMSELGTDPSA 618 Query: 776 ---SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYAS 832 A A ++S + F +HR S G TL +M Q D+A Y + Sbjct: 619 AMQGAEAAARYLLSELGRT-FQLGNVIHRNTVSIGATLFKGEQESIESLMRQIDLAIYQA 677 Query: 833 KNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLI 892 K GR V ++P A ERAA+ ++ I+E Q ++ + R Sbjct: 678 KGAGRNTVRFFDPSMEIALRERAAIEEALRY-AIEEEQFLLHYQAQIG---EDGRIEGAE 733 Query: 893 SLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK---GISISLP 948 L W E ++ F + L V + Q A+ S G+ +++ Sbjct: 734 VLLRWQHPERGMVSPAIFIPLAEETGDIVLLGSWVLKQAAAQLARWAESPVMAGLVLAVN 793 Query: 949 LSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIV 1004 +S L V + L + P L L + +++ E +Q L+ G Sbjct: 794 VSAVQLRQPDFVEQVTTVLREAGADPGRLKLELTESMLVNDVEATIAKMQSLKAIGIGFS 853 Query: 1005 LSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGP 1064 L G + LK L +D +V + D + + + A+ LG+ IA Sbjct: 854 LDDFGTGYSSLSYLKRLPLSQLKIDQSFVRDVLVDANDVAIASSVVALAKSLGLGVIAEG 913 Query: 1065 VVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 V + L+GIG G + + P+ Sbjct: 914 VETEAQRELLAGIGCHCYQGYLFSRPLPIGDFER 947 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 68/530 (12%), Positives = 152/530 (28%), Gaps = 36/530 (6%) Query: 34 LELSQFGTQLAPLWFPTSIMMVAFYRHAGRMWPGIALSCSLGNIAASILLFSTSSLNMTW 93 L LA W ++ V F+ + P + A ++ + N+ Sbjct: 16 LWCVILTLGLALGW---ALPSVRFFSTPAQYLPVHTALEFVAMAVACMVF--ALAWNLRR 70 Query: 94 TTINIVEAVVGAVLLRKLLPWYNPLQNLADWLRLA----------LGSAIVPPLLGGVLV 143 N + ++GA L L + + A L A +L Sbjct: 71 QPGNSDKILLGAGFLAVCLIDFGHTLSYAGMPDLLTPSGPEKAINFWLAGRYVAAAALLG 130 Query: 144 VLLTPGDDPLRAFLIWVLSESIGALALVPLGLLFKPHYLLRHRNPRLLFESLLTLAITLT 203 + + P D + A +V + + PR + Sbjct: 131 IAVLPKRDLSACA-----GNCLVAGVVVVAACAWWLGLMHPQWFPRTFVPGEGLTPFKIG 185 Query: 204 LSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTY 263 +L ++V + A ++ + + + + + L + Sbjct: 186 AEYLLAALYALAAWGLLVKAKRTDNANLHWLAAAAWVQGLAEMFFTLYGEVTDLFNLLGH 245 Query: 264 LMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQ 323 + + +L + A ++ + S + + + + G Sbjct: 246 VYKAVAYLMVYRAMFDAGVLAPF------REMKLERS--RLQALLSAIPDPVFVKNANGV 297 Query: 324 WLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNR 383 ++ NKA + LG ++ + G T + + ++ + + E + Sbjct: 298 FMSCNKAFERLLGAPEKSILGKTDYDFFDKDLADFFREKDRAATAAGRPLSNEEWLEFAA 357 Query: 384 NGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIW 443 +G + + DG + + DI KR E R+ A + Sbjct: 358 DGYSGLFETTKTPLYL-DGQAIGTLGIAHDITRRKRIEADL-----RLAAAAFESQTAML 411 Query: 444 EWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKL 503 + I ++ D + + +S++S ++ Sbjct: 412 VTDANGVILRVNQAFLRDTGYAVEECVGQTPRILRSGRHD-PAFYQKMWESIRSSGVWQG 470 Query: 504 EFRITVKDGIRHIRA-LANRVLNKEGEVERLLGINMDMTEVKQLNEALFQ 552 E KDG + + + VL GEV +G++ D++E K + Q Sbjct: 471 EIWDRRKDGSIYPKWLTISAVLGDSGEVTHYIGLHQDVSERKLAESRIHQ 520 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 56/166 (33%), Gaps = 6/166 (3%) Query: 277 LLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLG 336 + + + + + A S M + G L+ N+A + G Sbjct: 377 AIGTLGIAHDITRRKRIEADL-----RLAAAAFESQTAMLVTDANGVILRVNQAFLRDTG 431 Query: 337 YSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSL 396 Y+ EE G T + L Q++ + I + E ++G + L +S Sbjct: 432 YAVEECVGQTPRILRSGRHDPAFYQKMWESIRS-SGVWQGEIWDRRKDGSIYPKWLTISA 490 Query: 397 VRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGI 442 V G ++I +D++E K E QL + I + Sbjct: 491 VLGDSGEVTHYIGLHQDVSERKLAESRIHQLAYYDQVTGLPNRILL 536 >UniRef50_C6CKZ2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Dickeya RepID=C6CKZ2_DICZE Length = 689 Score = 840 bits (2172), Expect = 0.0, Method: Composition-based stats. Identities = 145/683 (21%), Positives = 265/683 (38%), Gaps = 24/683 (3%) Query: 425 QQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPED- 483 + +GI + + + +Y + V PE Sbjct: 6 WNSESLFQAILDRCPVGIAVINYDGHYVTVNPAYGAIYGYTQEEMAGRS--FTMVFPESA 63 Query: 484 RQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEV 543 R R L E+ + +DG+ + + G L +D+TE Sbjct: 64 RDSVLARHRQFLDEGGTLGGEWTVMRRDGVILTIWSESVPFAQHGHRADRLVYVLDITER 123 Query: 544 KQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTV 603 ++ E + + +S EA++ I+ + I +NP +++G++ + +G P Sbjct: 124 QKAREQM----KIAAAVYESTQEAIIVINTSRSIISINPAFTRLTGYSAADVVGQPSYIF 179 Query: 604 LHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVL 663 + + ++ ++ + G Y +I + G+ I V Sbjct: 180 R--SDRHDADFYTAMWRTVDEDGVWVGEMWDRKKDGSDYLKEITINVIKDAAGTPINYVG 237 Query: 664 VIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDR 723 V D+T+ +K + A++DA+T L NR F+ +L ++ + + AL+ IDLD Sbjct: 238 VFSDITQRKKQEALIWRQANYDAVTTLPNRHHFQDKLERAVEHAKQSGRPMALMLIDLDH 297 Query: 724 FKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE-SARFIAT 782 FK+VNDS GH AGDALL +++ + ++ +D +ARLGGDEF ++L D + + +A Sbjct: 298 FKSVNDSLGHRAGDALLLAVSNRLTDCVQGADTIARLGGDEFAIILTDLHQNGDSGCLAR 357 Query: 783 RIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTV 842 +++ + F +G V AS GI L +++ E+ AD A YA+K+ GR Sbjct: 358 TLLAQLAQ-PFNIDGESMLVSASIGIALFPNDSDTLEELFKNADQAMYAAKSAGRNCFNY 416 Query: 843 YEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCE-G 901 Y P A R ++ D + I+ Q + + + + + +L W Sbjct: 417 YTPALHQAARARLRLTNDLRT-AIQCGQFEVYYQPII--ELSTNKVVKAEALVRWRHPIR 473 Query: 902 EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVA--SKGISISLPLSVAGLSSATL 959 +I F D L L V + Q A+ +++ S L S Sbjct: 474 GMISPAEFIPLAEDTGLIVPLGDWVARQAITQLAQWRKIFDPHFQVAINQSPVQLRSKDF 533 Query: 960 VN-DLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRLAGCRIVLSQVGRDLQI 1014 +++L L + + I +L+ +++ R G +I + G Sbjct: 534 TEMTWVQELAQHGLEGNAVIIEITEGLLLNAESRVNDNLHLFRDTGIQIAIDDFGTGYSS 593 Query: 1015 FNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTL 1074 L+ D L +D ++ + + L I A LG+K +A V DTL Sbjct: 594 LAYLRKFDIDCLKIDRSFVEDL--DGVGFELCVAIIAMAHSLGLKVVAEGVETQQQCDTL 651 Query: 1075 SGIGVDLIYGEVIADAQPLDLLV 1097 + IG D G + + P L Sbjct: 652 ARIGCDYAQGFLFSRPVPAPELT 674 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 49/318 (15%), Positives = 108/318 (33%), Gaps = 33/318 (10%) Query: 300 SETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKD 359 SE+ F+ ++ +G+A++ +G ++ N A GY+QEE+ G +F + + Sbjct: 8 SESLFQAILDRCPVGIAVINYDGHYVTVNPAYGAIYGYTQEEMAGRSFTMVFPESARDSV 67 Query: 360 LQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKR 419 L + + + E T E R+G ++ G + + DI E ++ Sbjct: 68 LARHRQFL-DEGGTLGGEWTVMRRDGVILTIWSESVP-FAQHGHRADRLVYVLDITERQK 125 Query: 420 TEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECV 479 + + E+ I +I S + L + Sbjct: 126 AREQMKIAA----AVYESTQEAIIVINTSRSIISINPAFTRLTGYSAADVVGQPSYIFRS 181 Query: 480 LPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHI-RALANRVLNKEGEVERLLGINM 538 D + ++ + E KDG ++ N + + G +G+ Sbjct: 182 DRHDAD-FYTAMWRTVDEDGVWVGEMWDRKKDGSDYLKEITINVIKDAAGTPINYVGVFS 240 Query: 539 DMTEVKQLNEALFQE---------------KERLHITLDSI-----GEAVVCIDMAMKIT 578 D+T+ K+ ++++ +++L ++ A++ ID+ Sbjct: 241 DITQRKKQEALIWRQANYDAVTTLPNRHHFQDKLERAVEHAKQSGRPMALMLIDLD-HFK 299 Query: 579 FMNPVAEKMSGWTQEEAL 596 +N G +AL Sbjct: 300 SVNDS----LGHRAGDAL 313 Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats. Identities = 21/151 (13%), Positives = 50/151 (33%), Gaps = 1/151 (0%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 ER+ E E + + ++ T + N A + GYS ++ G Sbjct: 121 TERQKAREQMKIAAAVYESTQEAIIVINTSRSIISINPAFTRLTGYSAADVVGQPSYIFR 180 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 + + + E + E ++G + +++++ GTP+ ++ Sbjct: 181 SDRHDADFYTAMWRTV-DEDGVWVGEMWDRKKDGSDYLKEITINVIKDAAGTPINYVGVF 239 Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGI 442 DI + K+ E + + + Sbjct: 240 SDITQRKKQEALIWRQANYDAVTTLPNRHHF 270 >UniRef50_A5GBG4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=A5GBG4_GEOUR Length = 709 Score = 839 bits (2169), Expect = 0.0, Method: Composition-based stats. Identities = 122/570 (21%), Positives = 227/570 (39%), Gaps = 17/570 (2%) Query: 540 MTEVKQLNEALFQEK--ERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALG 597 MT +K + QEK +L ++ A++ D + I ++NP +++G+T E +G Sbjct: 128 MTSIKWERQIREQEKFIRKLSRAVEQSPVAIIITDTSGTIEYVNPRFTQLTGYTSAETIG 187 Query: 598 VPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGS 657 + + ++ + + ++G Y SI+P++ + Sbjct: 188 KKPHILK--SGETPPEEYRKLWEIISGGGEWWGEFHNRKKNGELYWASASISPITNGNEQ 245 Query: 658 NIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALV 717 + +D+TE ++ + A +D LT L NR F + + + L + ++ A++ Sbjct: 246 ITHFIAFQEDITERKQAEETIKQMAYYDTLTGLPNRHLFNELMHLALAQAHRHNRLLAVL 305 Query: 718 FIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSS-DVLARLGGDEFGLLLPDCNV-E 775 F+DLDRFK +ND+ GH GD LL+ A + R D +AR GGDEF +LLPD + + Sbjct: 306 FLDLDRFKHINDTLGHTVGDQLLQASAHRLKECCRRDRDTVARRGGDEFIILLPDIDDVQ 365 Query: 776 SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNG 835 A +A +II A F+ + GI++ ++ ++ AD+A Y +K Sbjct: 366 EAVRVAQKIIDAFTQV-FVLPDIELFISTCIGISIFPNDGRDTETLIKNADMAMYRAKEQ 424 Query: 836 GRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLK 895 GR R +Y R M + + ++ + + + + + + L +L Sbjct: 425 GRSRYHLYTSSMDEQAFRRLTMENSLR-KALQREEFSLYYQPKVNIK--TGQIVCLEALV 481 Query: 896 LWS-CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV--ASKGISISLPLSVA 952 W E +I F D L L V Q + +++ S Sbjct: 482 RWQNPEMGLILPNQFIPLAEDTGLIIPLGEWVLRTACAQNKTWQLLNYPPMRVAVNFSPR 541 Query: 953 GLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLSQV 1008 L + + + L + L P L L + +L + E ++ +L G I + Sbjct: 542 QFQQPRLTDMVEQILGEADLAPCWLELELTENVMLQNVEKTVQTLNRLSNLGIHISIDDF 601 Query: 1009 GRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLP 1068 G + +K L +D ++ N D + + AQ L + IA V Sbjct: 602 GTGYSSLSYIKKLPIQTLKIDRSFVHDINTNADDAAIAIAVITMAQSLRLNVIAEGVETL 661 Query: 1069 LVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 M L G+ + G + + P+ + Sbjct: 662 EQMKLLDGLNCPEMQGYLFSKPLPVAEMTT 691 Score = 149 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 86/249 (34%), Gaps = 9/249 (3%) Query: 294 RKHISESE---THFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQL 350 + I E E A+E S + + + T G N Q GY+ E G L Sbjct: 134 ERQIREQEKFIRKLSRAVEQSPVAIIITDTSGTIEYVNPRFTQLTGYTSAETIGKKPHIL 193 Query: 351 TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQ 410 E ++ +++ ++ISG + E +NG++ WA ++S + + + +FIA Sbjct: 194 KSGETPPEEYRKLWEIISG-GGEWWGEFHNRKKNGELYWASASISPITNGNEQITHFIAF 252 Query: 411 IEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKP 470 EDI E K+ E+ +Q+ TL EL + R L + Sbjct: 253 QEDITERKQAEETIKQMAYYDTLTGLPNRHLF--NELMHLALAQAHRHNRLLAVLFLDLD 310 Query: 471 NWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEV 530 ++ + + + L+ + I ++ E Sbjct: 311 RFKHINDTLGHTVGDQLLQASAHRLKECCRRDRDTVARRGGDEFIILL---PDIDDVQEA 367 Query: 531 ERLLGINMD 539 R+ +D Sbjct: 368 VRVAQKIID 376 Score = 70.9 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 39/137 (28%), Gaps = 3/137 (2%) Query: 419 RTEQVNQQLMERIT---LANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVW 475 + E+ ++ + I A E + I + I + R +L + Sbjct: 132 KWERQIREQEKFIRKLSRAVEQSPVAIIITDTSGTIEYVNPRFTQLTGYTSAETIGKKPH 191 Query: 476 YECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLG 535 + K+ + + A + + N ++ + Sbjct: 192 ILKSGETPPEEYRKLWEIISGGGEWWGEFHNRKKNGELYWASASISPITNGNEQITHFIA 251 Query: 536 INMDMTEVKQLNEALFQ 552 D+TE KQ E + Q Sbjct: 252 FQEDITERKQAEETIKQ 268 >UniRef50_A4U4T7 Two-component sensory box protein n=3 Tax=Magnetospirillum RepID=A4U4T7_9PROT Length = 828 Score = 838 bits (2166), Expect = 0.0, Method: Composition-based stats. Identities = 147/693 (21%), Positives = 287/693 (41%), Gaps = 21/693 (3%) Query: 416 ELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVW 475 E ++ R G+G+ + + + + + + Sbjct: 130 ERSHAASALKRSEGRFRALFANAGLGVVLADAHGRMVEANPAFLSMVGYGEVELRG-EKF 188 Query: 476 YECVLPEDRQHAEKVIRDSLQ-SRSPFKLEFRITVKDG-IRHIRALANRVLNKEGEVERL 533 + P+D + + + L SR F+L R KDG I + + +G+ Sbjct: 189 RDITHPDDIGLNDTLRAEVLDGSRDGFQLTKRYIAKDGRIIWAKLTCTVMREADGQQPFT 248 Query: 534 LGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQE 593 + + D+TE K+L + + ++ G+ + D +I +NP +++G+T + Sbjct: 249 VTVVEDITERKRLEDNM----RLAATVFENSGDGLFVTDAENRIIHVNPAFTRITGFTAD 304 Query: 594 EALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLST 653 E LG + + + +++ + ++ + G + +I + Sbjct: 305 EVLGRNPRLL--ASGRHDHDFFIQLWTVLLRDGKWQGEIWDRRKDGEMFAGWQNIAVVRD 362 Query: 654 LDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQR 713 DG V VI D+T +++ +LSY+A+HD LT L NR F+++L + + H Sbjct: 363 TDGKVQNFVAVISDITTRKQVEERLSYAANHDPLTRLPNRTLFQERLTRAIARASRNHNL 422 Query: 714 HALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC- 772 AL+FIDLDRFK VND+ GH AGD LL+++A + S +R D +ARL GDEF ++L D Sbjct: 423 VALLFIDLDRFKQVNDTMGHLAGDMLLQQVAERLSSCIRQGDTVARLSGDEFTIILEDVQ 482 Query: 773 NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYAS 832 + A + +++ + + G + +S G++L + ++ AD A Y + Sbjct: 483 DPRDAAVVGHKVLRLLQE-PVALTGGEAHISSSIGVSLYPTDAGDPQTLLKLADAAMYRA 541 Query: 833 KNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLI 892 K+ GR + A ER A+ + + + Q ++ + + R + + Sbjct: 542 KHLGRNSCQFHSEAVNAEAFERLALENALRG-AVDQGQFLLHYQPIFDVK--SGRAVAVE 598 Query: 893 SLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK--GISISLPL 949 +L W E ++ F + + + R VF + +QA + + + + L Sbjct: 599 ALLRWRHPEVGVVAPNQFLALAEETGMIVPIGRWVFDQACRQAKLWRDAGHVDLRLHINL 658 Query: 950 SVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILD---HAESV-QKLRLAGCRIVL 1005 S L L+ + LE S LPP+ L L + ++D ++ + G + + Sbjct: 659 SPRQLRQPDLIEMVAAALEVSQLPPQALVLEVMETCVIDKAFDPSALFARFAALGVGLAI 718 Query: 1006 SQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPV 1065 + G F L+ L + N+ + + ++T I A+ L M +A + Sbjct: 719 DEFGSGYSSFAFLRRLPVTILKVAQSFVRNLSSSEDESEIVTAIVALARGLHMTVVAPGI 778 Query: 1066 VLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 +D L+G G D + G +++ P + Sbjct: 779 ENKAQLDFLTGFGCDKVQGFLLSKPLPGTEMTE 811 Score = 189 bits (481), Expect = 5e-46, Method: Composition-based stats. Identities = 84/445 (18%), Positives = 155/445 (34%), Gaps = 40/445 (8%) Query: 166 GALALVPLGLLFKPHYLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMW 225 G LV L LL R LL +L L + L L LP F Sbjct: 20 GDARLVELYLLEDITSPFRVLKAELLSAALGLLDANIIDVVLLDLSLPDSFGM------- 72 Query: 226 SAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTM 285 + R L+ + + + A +L + YL+ + + I Sbjct: 73 DTLDRLRAAHPLVPVVVLTGTNDEALALQALRQGAQDYLVKGQGDGNLVRRAIFYAI--- 129 Query: 286 VMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGL 345 + SE FR + +G+ L G+ ++ N A +GY + ELRG Sbjct: 130 ---ERSHAASALKRSEGRFRALFANAGLGVVLADAHGRMVEANPAFLSMVGYGEVELRGE 186 Query: 346 TFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPL 405 F+ +T P+D+ + +++ G + + + KRY ++G ++WA L +++R DG Sbjct: 187 KFRDITHPDDIGLNDTLRAEVLDGSRDGFQLTKRYIAKDGRIIWAKLTCTVMREADGQQP 246 Query: 406 YFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIP 465 + + +EDI E KR E + E G G++ + + I + + Sbjct: 247 FTVTVVEDITERKRLEDNMRLAA----TVFENSGDGLFVTDAENRIIHVNPAFTRITGFT 302 Query: 466 PHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRAL-ANRVL 524 D ++ L+ ++ E KDG V Sbjct: 303 ADEVLGRNPRLLASGRHDHDFFIQLWTVLLRDGK-WQGEIWDRRKDGEMFAGWQNIAVVR 361 Query: 525 NKEGEVERLLGINMDMTEVKQLNEALFQE----------------KERLHITLDSIGE-- 566 + +G+V+ + + D+T KQ+ E L + + Sbjct: 362 DTDGKVQNFVAVISDITTRKQVEERLSYAANHDPLTRLPNRTLFQERLTRAIARASRNHN 421 Query: 567 --AVVCIDMAMKITFMNPVAEKMSG 589 A++ ID+ + +N ++G Sbjct: 422 LVALLFIDLD-RFKQVNDTMGHLAG 445 >UniRef50_A0L8P4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8P4_MAGSM Length = 754 Score = 837 bits (2164), Expect = 0.0, Method: Composition-based stats. Identities = 131/617 (21%), Positives = 248/617 (40%), Gaps = 16/617 (2%) Query: 492 RDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKE--GEVERLLGINMDMTEVKQLNEA 549 +++ + + + + +R I A + L + L N ++ + Sbjct: 122 QNAHREAEAHARQKELQAAEQLRRIEEQARQQLEQRVRERTLELTQSNERLSNEVAVRMR 181 Query: 550 LFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFG 609 +H ++ EA++ D I +NP +++G+++EEALG + + Sbjct: 182 AESGLRLIHKVFENTSEAIILTDPQGMILDINPAFTEITGFSREEALGHNPRSFK--SDR 239 Query: 610 DNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVT 669 + N++ + ++ ++G Y +I + G + + D++ Sbjct: 240 HDATFYTNMWRKIAEEGFWQGEIWDRRKNGEIYPKRLTINAVRNQAGEVENYIGIFSDIS 299 Query: 670 ESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVND 729 ES+ +L A +DALT L NR F +L ++ A+ FIDLDRFK VND Sbjct: 300 ESKATELKLERLAYYDALTQLPNRMLFHDRLEHEFYNAQRHRKQVAVFFIDLDRFKQVND 359 Query: 730 SAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVES-ARFIATRIISAV 788 + GH+AGD LL+ +A + +R++D +AR+GGDEF ++L D + +A +++ + Sbjct: 360 TLGHSAGDELLQHVAQRLEGCVRAADTVARMGGDEFTVILADISDNESVARVARKVLEEL 419 Query: 789 NDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQA 848 +G VGAS GI L DN + + AD+A Y +K GRG + + Sbjct: 420 -QKSISIKGHDIFVGASIGIALYPDNGNDVETLTKNADMAMYRAKESGRGNYKFFSEEMN 478 Query: 849 AAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQ 907 + S+R ++ + N L + + + + + +L W +G +I Sbjct: 479 VSTSQRLSLESQL-HHAVNANLLEVYYQPKLNMQ--SGIMVGMEALVRWPQADGSMIPPI 535 Query: 908 TFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKG--ISISLPLSVAGLSSATLVNDLLE 965 F + L L R V + A+ V G + +++ LS S LV ++ + Sbjct: 536 QFIPVAEETGLIVPLGRLVMRQAMLDCARWVRETGMNLRVAVNLSAREFQSPGLVVEIEQ 595 Query: 966 QLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLSQVGRDLQIFNSLKAN 1021 L L R + I ++ E +++++ G I + G + LK Sbjct: 596 TLAECGLDARHFEVEITESLMMHDVENAIATLEQISRLGIHIAMDDFGTGYSSLSYLKKF 655 Query: 1022 MADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDL 1081 L +D ++ + D ++ I A+ L +K +A V + L D Sbjct: 656 PIHSLKVDRSFVKDIPDDPNDIEIVAAILSLAKVLNLKVVAEGVETQEQLSFLRQNLCDE 715 Query: 1082 IYGEVIADAQPLDLLVN 1098 G + Sbjct: 716 CQGYSFSKPLSAVDFTA 732 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 40/275 (14%), Positives = 80/275 (29%), Gaps = 24/275 (8%) Query: 260 PRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHF--------------- 304 + L + + R +++S Sbjct: 128 AEAHARQKELQAAEQLRRIEEQARQQLEQRVRERTLELTQSNERLSNEVAVRMRAESGLR 187 Query: 305 --RNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQ 362 E ++ + L +G L N A + G+S+EE G + Sbjct: 188 LIHKVFENTSEAIILTDPQGMILDINPAFTEITGFSREEALGHNPRSFKSDRHDATFYTN 247 Query: 363 VEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQ 422 + + I+ E + E +NG++ L ++ VR+ G +I DI+E K TE Sbjct: 248 MWRKIAEE-GFWQGEIWDRRKNGEIYPKRLTINAVRNQAGEVENYIGIFSDISESKATEL 306 Query: 423 VNQQLMERITLANEAGGIGIWE------WELKPNIFSWDKRMFELYEIPPHIKPNWQVWY 476 ++L L + + + + + +L Sbjct: 307 KLERLAYYDALTQLPNRMLFHDRLEHEFYNAQRHRKQVAVFFIDLDRFKQVNDTLGHSAG 366 Query: 477 ECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD 511 + +L Q E +R + EF + + D Sbjct: 367 DELLQHVAQRLEGCVRAADTVARMGGDEFTVILAD 401 Score = 67.4 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 31/217 (14%), Positives = 60/217 (27%), Gaps = 16/217 (7%) Query: 349 QLTWPEDLNKD----LQQVEKLISGEINTYSMEKRYYNRN----GDVVWALLAVSLVRHT 400 L ED + + + + I + E + + + Sbjct: 97 DLIHKEDPKEVFLMRVAAMGRFIETQNAHREAEAHARQKELQAAEQLRRIEEQAR--QQL 154 Query: 401 DGTPLYFIAQIEDINELKRTEQVNQ-QLMERITLA---NEAGGIGIWEWELKPNIFSWDK 456 + ++ NE E + + + L E I + + I + Sbjct: 155 EQRVRERTLELTQSNERLSNEVAVRMRAESGLRLIHKVFENTSEAIILTDPQGMILDINP 214 Query: 457 RMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHI 516 E+ D + + ++ E K+G + Sbjct: 215 AFTEITGFSREEALGHNPRSFKSDRHD-ATFYTNMWRKIAEEGFWQGEIWDRRKNGEIYP 273 Query: 517 -RALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQ 552 R N V N+ GEVE +GI D++E K L + Sbjct: 274 KRLTINAVRNQAGEVENYIGIFSDISESKATELKLER 310 >UniRef50_Q47Z22 Sensory box/GGDEF/GAF/EAL domain protein n=5 Tax=Gammaproteobacteria RepID=Q47Z22_COLP3 Length = 1206 Score = 836 bits (2161), Expect = 0.0, Method: Composition-based stats. Identities = 156/696 (22%), Positives = 281/696 (40%), Gaps = 26/696 (3%) Query: 416 ELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIK-PNWQV 474 E + + E++ L +G W+W + ++R + + Sbjct: 507 EKIQANLALKASDEQMQLVLAGADLGFWDWNIVTGRVDRNERWATMLGYTHKELKHSTNQ 566 Query: 475 WYECVLPEDRQHAEKVIRDSLQSRS-PFKLEFRITVK-DGIRHIRALANRV-LNKEGEVE 531 W + V EDR+ A + I D L+ RS LE+R+ K G R + AN + + G+ Sbjct: 567 WADFVHQEDREKAWQSINDVLEGRSKSHSLEYRMLTKEGGYRWVHDQANVMQRHSNGKPL 626 Query: 532 RLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWT 591 R+ G + D+T K E + + GE ++ D I +N ++G++ Sbjct: 627 RMSGTHSDITNRKLAEEKI----KLAASVFSHAGEGIIITDDKATIIDINDAFTNITGFS 682 Query: 592 QEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPL 651 +EEA+G + + +++ A + +V ++G Y V +I+ + Sbjct: 683 REEAIGKNPRILQ--SGRQTPEFYADMWQALQNEGYWSGEVWNRRKNGEVYAVMQTISAV 740 Query: 652 STLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTH 711 + G V + D+T ++ QL + A D LT+L NR +L + + Sbjct: 741 RDVHGIATHYVSLGNDITLMKEHQNQLEHIAHFDILTNLPNRVLLADRLSQAMLQCSRHK 800 Query: 712 QRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD 771 Q A+VF+DLD FK VND+ GH GD LL L+ M LR +D LAR+GGDEF +L D Sbjct: 801 QSLAVVFLDLDGFKHVNDTHGHDIGDELLIALSVRMKEALRENDSLARIGGDEFVAVLAD 860 Query: 772 CNV-ESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACY 830 E + R++ A ++ I++ V + AS G+TL +N A +M AD A Y Sbjct: 861 LTTVEDCEPVLERLLLAASE-PVIFDNIVLNISASIGVTLYPQDNVGADLLMRHADQAMY 919 Query: 831 ASKNGGRGRVTVYEPQQAAAH-SERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNL 889 +K G+ R +++ Q A +R ++ + +Q ++ + R + Sbjct: 920 VAKESGKNRYHLFDTAQDDAVKVQRESLEA--IRSALDNHQFVLHYQPKVNMR--KGIVT 975 Query: 890 WLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK---GISI 945 + +L W + +++ F + +S + V Q ++ +SI Sbjct: 976 GVEALIRWQHPKRGLLNPIEFLPVIENNPMSIEMGEWVIDTALTQISQWQKLGLNFPVSI 1035 Query: 946 SLPLSVAGLSSATLVNDLLEQLENSP-LPPRLLHLIIPAEAILDHA----ESVQKLRLAG 1000 S+ ++ L + L+ L P + P L L + + L+ + G Sbjct: 1036 SVNIAALQLQQPDFTDRLMILLAAHPDVEPHYLELEVLETSALEDVYNVSTIMNACMALG 1095 Query: 1001 CRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKT 1060 L G L+ A+ + +D ++ + D ++ + A+ Sbjct: 1096 VNFALDDFGTGYSSLTYLRRLPANLIKIDQSFVRDMLHDSDDLAIVEGVIALAKSFKRDV 1155 Query: 1061 IAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 IA V L +G +L G IA P + Sbjct: 1156 IAEGVETIEHGTALLQLGCELAQGYGIARPMPASEI 1191 Score = 157 bits (398), Expect = 3e-36, Method: Composition-based stats. Identities = 55/354 (15%), Positives = 113/354 (31%), Gaps = 14/354 (3%) Query: 224 MWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIM 283 W+ + +A L + + S L +L + P + ++ A + Sbjct: 445 YWTPYKELASKAGLGACWSEPIRSTQGKI---LGTFAIYHLEVNKPTEANMTLIEQAASL 501 Query: 284 TMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELR 343 + + S+ + + + +G + N+ LGY+ +EL+ Sbjct: 502 ASIAIEKIQANLALKASDEQMQLVLAGADLGFWDWNIVTGRVDRNERWATMLGYTHKELK 561 Query: 344 GLT--FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLV-RHT 400 T + ED K Q + ++ G ++S+E R + G W +++ RH+ Sbjct: 562 HSTNQWADFVHQEDREKAWQSINDVLEGRSKSHSLEYRMLTKEGGYRWVHDQANVMQRHS 621 Query: 401 DGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFE 460 +G PL DI K E+ + G GI + K I + Sbjct: 622 NGKPLRMSGTHSDITNRKLAEEKIKLAA----SVFSHAGEGIIITDDKATIIDINDAFTN 677 Query: 461 LYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRH-IRAL 519 + + +LQ+ + E K+G + + Sbjct: 678 ITGFSREEAIGKNPRILQS-GRQTPEFYADMWQALQNEGYWSGEVWNRRKNGEVYAVMQT 736 Query: 520 ANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDM 573 + V + G + + D+T +K+ L L ++ V+ D Sbjct: 737 ISAVRDVHGIATHYVSLGNDITLMKEHQNQLEHIAHF--DILTNLPNRVLLADR 788 Score = 139 bits (352), Expect = 5e-31, Method: Composition-based stats. Identities = 37/274 (13%), Positives = 90/274 (32%), Gaps = 15/274 (5%) Query: 278 LPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGY 337 L + + + + I + ++ G+ + + + N A G+ Sbjct: 626 LRMSGTHSDITNRKLAEEKIK----LAASVFSHAGEGIIITDDKATIIDINDAFTNITGF 681 Query: 338 SQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLV 397 S+EE G + L + + + + E +S E +NG+V + +S V Sbjct: 682 SREEAIGKNPRILQSGRQTPEFYADMWQALQNE-GYWSGEVWNRRKNGEVYAVMQTISAV 740 Query: 398 RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKR 457 R G ++++ DI +K + + + L N + + + L + + Sbjct: 741 RDVHGIATHYVSLGNDITLMKEHQNQLEHIAHFDILTNLPNRVLLAD-RLSQAMLQCSRH 799 Query: 458 -------MFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVK 510 +L + + +L ++ +R++ EF + Sbjct: 800 KQSLAVVFLDLDGFKHVNDTHGHDIGDELLIALSVRMKEALRENDSLARIGGDEFVAVLA 859 Query: 511 D--GIRHIRALANRVLNKEGEVERLLGINMDMTE 542 D + + R+L E I ++++ Sbjct: 860 DLTTVEDCEPVLERLLLAASEPVIFDNIVLNISA 893 Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 63/442 (14%), Positives = 133/442 (30%), Gaps = 55/442 (12%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGL- 345 + + ++++ S+ N + + +G + N LG S++++ Sbjct: 209 IDVLKLSNENVNSSQKQLLNVINGAKLGYWDWCYQTGEHVVNDEWLSILGLSRQDITNHI 268 Query: 346 -TFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDG-- 402 + L P D + V+ I Y +E R + +G VW + S++ + + Sbjct: 269 SDWDGLIHPNDDQFMKKTVQTHILS-GKNYVVEFRMKHADGRWVWIQGSGSVIEYDENTH 327 Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLAN--EAGGIGIWEWELKPNIFSWDKRMFE 460 P+ +DI K E + + L + + I E ++ + Sbjct: 328 EPVRLCGTHQDITVRKLAELREKSRSHVLELLTSGDLLPV-ILEAIVRGVEQENSDMLCS 386 Query: 461 LYEIPPHIKPNWQVWYECVL--PEDRQHAEKVIRDSLQSRSPFKLEF---RITVKDGIRH 515 + + + P+ A I + S F R+ V+D H Sbjct: 387 ILLLDDE---GKHLLSGAAPSLPDFYNSAINGIEIGVGVGSCGTAAFTNKRVIVEDIQNH 443 Query: 516 IRA---------------LANRVLNKEGEVERLLGINM---------DMT---------- 541 + + + +G++ I +MT Sbjct: 444 PYWTPYKELASKAGLGACWSEPIRSTQGKILGTFAIYHLEVNKPTEANMTLIEQAASLAS 503 Query: 542 ---EVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGV 598 E Q N AL E++ + L ++ N M G+T +E Sbjct: 504 IAIEKIQANLALKASDEQMQLVLAGADLGFWDWNIVTGRVDRNERWATMLGYTHKELKHS 563 Query: 599 PLLTVLHITFGDNGPLMENIYSADTSRS-AIEQDVVLHCRSGGSYDVHYSITPL-STLDG 656 + D ++I RS + + + + GG VH + +G Sbjct: 564 TNQWADFVHQEDREKAWQSINDVLEGRSKSHSLEYRMLTKEGGYRWVHDQANVMQRHSNG 623 Query: 657 SNIGSVLVIQDVTESRKMLRQL 678 + D+T + ++ Sbjct: 624 KPLRMSGTHSDITNRKLAEEKI 645 Score = 77.8 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 56/154 (36%), Gaps = 4/154 (2%) Query: 411 IEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKP 470 I++I+ LK + + +++ +G W+W + + + + Sbjct: 206 IKNIDVLKLSNENVNSSQKQLLNVINGAKLGYWDWCYQTGEHVVNDEWLSILGLSRQDIT 265 Query: 471 NW-QVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEG- 528 N W + P D Q +K ++ + S + +EFR+ DG + V+ + Sbjct: 266 NHISDWDGLIHPNDDQFMKKTVQTHILSGKNYVVEFRMKHADGRWVWIQGSGSVIEYDEN 325 Query: 529 --EVERLLGINMDMTEVKQLNEALFQEKERLHIT 560 E RL G + D+T K L + Sbjct: 326 THEPVRLCGTHQDITVRKLAELREKSRSHVLELL 359 >UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio RepID=A7K0U5_VIBSE Length = 815 Score = 835 bits (2158), Expect = 0.0, Method: Composition-based stats. Identities = 128/696 (18%), Positives = 256/696 (36%), Gaps = 24/696 (3%) Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQV 474 E R + + + + IW + ++ + ++ Sbjct: 132 QERTRHQTAATTPLPTLQEFIDCLEDHIWIKGMDGLYSMTNRSVENAWQKTNSEIIGKDD 191 Query: 475 WYECVLPEDRQHAEKVIRDSLQSRS--PFKLEFRITVKDGIRHIRALANRVLNKEGEVER 532 + E + + + + + + +I + + + + V + +G + Sbjct: 192 FALFSH-ERAEKFIEADNLVVATGTLNIVEECRQIDENNNPTWLETIKSPVRDNDGNLIG 250 Query: 533 LLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQ 592 +LG+ ++T K + L ++ E +V D I +N +++G+ Sbjct: 251 ILGMTRNITRRKMVETQLS----LASKIFNNSQEGMVITDRNANIIDVNTAFTQITGYRS 306 Query: 593 EEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLS 652 EE +G + + + + ++ ++ + + + + G Y +I+ + Sbjct: 307 EEVIGKNPRILR--SGHHDQGFYKQLWHQLETKGQWKGEFINRKKDGSIYPQLATISAVM 364 Query: 653 TLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQ 712 I + V +D++ + +L A +D LT+L NR L ++T + Q Sbjct: 365 DDKNHLINYICVFEDISVRKAHEEKLQRMAFYDPLTNLPNRTHLLSLLEQHIETGHKNQQ 424 Query: 713 RHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC 772 A +F+D+D FK +NDS GH GD LL +LA + +L + +AR+GGDEF ++LPD Sbjct: 425 TFATLFLDIDHFKHINDSMGHFCGDQLLSKLAIRLQDILHLNAHVARIGGDEFVIILPDV 484 Query: 773 NVESA--RFIATRIISAVNDYHFIWEGRV-HRVGASAGITLIDDNNHQAAEVMSQADIAC 829 + + A + I+S F RV S GI L + + ++ AD A Sbjct: 485 HSDVALLETVGD-ILSVFQQ-PFDLANHDSLRVSTSIGIALYPRDGQDSETLLKNADTAM 542 Query: 830 YASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNL 889 Y +K GR Y P + + I++ QL + + + + + Sbjct: 543 YLAKKNGRNGYAFYSPDLTDKSVSHVRIQSAL-HQAIEKQQLRLEFQPQYN--LEQHAIV 599 Query: 890 WLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKG--ISIS 946 + +L W E ++ F L ++ V QQ + I+ Sbjct: 600 GVETLLRWQHPEFGLVPPADFIPIAEKTGLIQSIGEWVLLHACQQGNAWLEQGVEFGRIA 659 Query: 947 LPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCR 1002 + +S L + + L + L + P + L L I +L + + +LR G Sbjct: 660 VNVSALQLQQSNFIQRLSDILNQTGFPAQRLDLEITESFLLIDPQQAIASLNQLRELGIE 719 Query: 1003 IVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIA 1062 I L G + LK + L +D ++V N ++ I + L +K +A Sbjct: 720 ISLDDFGTGYSSLSYLKGLPINKLKIDRSFVSDVPSNSDSNAIVNAIIAMGKTLSLKVVA 779 Query: 1063 GPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 + D L G G + + + L Sbjct: 780 EGIETQEQADYLFEKGCVYGQGYLFSRPVSAEKLFR 815 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 36/239 (15%), Positives = 71/239 (29%), Gaps = 7/239 (2%) Query: 281 NIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQE 340 I + M RK + + S GM + + N A Q GY E Sbjct: 248 LIGILGMTRNITRRKMVETQLSLASKIFNNSQEGMVITDRNANIIDVNTAFTQITGYRSE 307 Query: 341 ELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHT 400 E+ G + L +Q+ + + + E ++G + L +S V Sbjct: 308 EVIGKNPRILRSGHHDQGFYKQLWHQLETKGQ-WKGEFINRKKDGSIYPQLATISAVMDD 366 Query: 401 DGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIF-SWDKRMF 459 + +I EDI+ K E+ Q++ L N + + +++ F Sbjct: 367 KNHLINYICVFEDISVRKAHEEKLQRMAFYDPLTNLPNRTHLLSLLEQHIETGHKNQQTF 426 Query: 460 ELYEIPPHIKPNWQVWYECVLPEDRQ-----HAEKVIRDSLQSRSPFKLEFRITVKDGI 513 + + + + ++ + EF I + D Sbjct: 427 ATLFLDIDHFKHINDSMGHFCGDQLLSKLAIRLQDILHLNAHVARIGGDEFVIILPDVH 485 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 44/302 (14%), Positives = 98/302 (32%), Gaps = 6/302 (1%) Query: 252 ADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYS 311 L P + WL L+ + ++ + + + + ++ Sbjct: 96 FAVLALTHPDDQITVVSAWLSALVGRMSFDVSSHYQQERTRHQTAATTPLPTLQEFIDCL 155 Query: 312 AIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEI 371 + + G +G + TN+++ + E+ G L E K ++ +++ Sbjct: 156 EDHIWIKGMDGLYSMTNRSVENAWQKTNSEIIGKDDFALFSHERAEKFIEADNLVVATGT 215 Query: 372 NTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERI 431 E R + N + W S VR DG + + +I K E + Sbjct: 216 LNIVEECRQIDENNNPTWLETIKSPVRDNDGNLIGILGMTRNITRRKMVETQLSLASK-- 273 Query: 432 TLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVI 491 G+ + NI + ++ D+ K + Sbjct: 274 --IFNNSQEGMVITDRNANIIDVNTAFTQITGYRSEEVIGKNPRILRSGHHDQG-FYKQL 330 Query: 492 RDSLQSRSPFKLEFRITVKDGIRHIR-ALANRVLNKEGEVERLLGINMDMTEVKQLNEAL 550 L+++ +K EF KDG + + A + V++ + + + + D++ K E L Sbjct: 331 WHQLETKGQWKGEFINRKKDGSIYPQLATISAVMDDKNHLINYICVFEDISVRKAHEEKL 390 Query: 551 FQ 552 + Sbjct: 391 QR 392 >UniRef50_C7RQ11 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RQ11_9PROT Length = 978 Score = 835 bits (2157), Expect = 0.0, Method: Composition-based stats. Identities = 143/710 (20%), Positives = 269/710 (37%), Gaps = 25/710 (3%) Query: 404 PLYFIAQIEDINELKRTEQV---NQQLMERITLANEAGGIGIWEWELKPNIF---SWDKR 457 P IED R Q + L AG ++ + Sbjct: 128 PASLAGVIEDAARQARFRQESSSVRPATTHRQLVLSAGPTVLYACGVDGQSLVPLWVSDN 187 Query: 458 MFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGI-RHI 516 + + P W V DR H + L S + E+R G+ R + Sbjct: 188 ITRVLHFSPAECLAPDWWVSHVHDADRAHVLETWPRLLADGSLLQ-EYRFRDGQGVVRWL 246 Query: 517 RALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMK 576 R + + + ++G D+T AL + + L+S + V+ D+ + Sbjct: 247 RDHKRLLFDANHQPLAVVGNWDDVT----AGHALAERQRLHATALESTRDGVLIADLTGR 302 Query: 577 ITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHC 636 I +NP +M+G+T EA+G + + + + ++++ T + ++ Sbjct: 303 IISVNPAFSEMTGYTAAEAIGRNPRLLQ--SGRHDRAFYQAMWASLTQAGHWQGELWNRR 360 Query: 637 RSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASF 696 G Y +++ + G + V D+++ + +L + A +D LT L NR Sbjct: 361 ADGEIYPQWATLSVVKDEHGQPTHYLAVFTDLSKLKHREEELEHLAHYDPLTDLPNRLLL 420 Query: 697 EKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDV 756 L+ L+ + A++ I+LD+FK VNDS GHA GD LL + + + + LR DV Sbjct: 421 RSLLQHALERAQRQGGKSAVLVINLDQFKNVNDSLGHALGDELLLGVTARLKARLRHEDV 480 Query: 757 LARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNN 815 + RLG DEF +L + E+A IA +++A+ + +G AS GI++ + Sbjct: 481 VGRLGADEFVAILEASQDAENAGSIAGDLLAALAPPFVLADGHETYARASIGISVFPQDG 540 Query: 816 HQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLA 875 A +++ AD+A + +K G + Y + +R M + R + + +L++ Sbjct: 541 KGANDLLRSADVAMHRAKQRGGNQYAFYTGELGHGALQRLEMETALR-RALIQGELVLHY 599 Query: 876 HGVASPRIPEARNLWLISLKLWSCEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQA 934 + + +L W G ++ F + L + V +E +Q Sbjct: 600 QPKLD--LASGVIVGGEALLRWQRPGFGLVPPYRFIPLAEETGLIVPIGAWVINETCRQI 657 Query: 935 AKA--VASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA-- 990 + +++ +S + L L L + PR+L L + ++ Sbjct: 658 RAWAEAGQPSVMVAVNVSARQFAGGELEAVLATALRKHAVDPRMLGLELTESMLMAAPEQ 717 Query: 991 --ESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITI 1048 E + LR G + L G + L D L +D ++ + + T Sbjct: 718 ATERLDALRRVGVAVALDDFGTGYSSLSYLSRFPVDELKIDRSFITHIVSDPKAANIATA 777 Query: 1049 IQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 + A R+ +K +A V + L D I G + + P D Sbjct: 778 VIALAHRMALKVVAEGVETETQLSYLRKNRCDQIQGYLFSAPVPADEFAT 827 Score = 152 bits (384), Expect = 9e-35, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 78/222 (35%), Gaps = 11/222 (4%) Query: 295 KHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPE 354 ++E + A+E + G+ + G+ + N A + GY+ E G + L Sbjct: 274 HALAERQRLHATALESTRDGVLIADLTGRIISVNPAFSEMTGYTAAEAIGRNPRLLQSGR 333 Query: 355 DLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDI 414 Q + ++ + + E +G++ +S+V+ G P +++A D+ Sbjct: 334 HDRAFYQAMWASLT-QAGHWQGELWNRRADGEIYPQWATLSVVKDEHGQPTHYLAVFTDL 392 Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQV 474 ++LK E+ + L L + + + + +R + N Sbjct: 393 SKLKHREEELEHLAHYDPLTDLPNRLLLRSL-----LQHALERAQRQGGKSAVLVINLDQ 447 Query: 475 WYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHI 516 + + D L +L+ R+ +D + + Sbjct: 448 FKNV-----NDSLGHALGDELLLGVTARLKARLRHEDVVGRL 484 >UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K2_9PROT Length = 925 Score = 834 bits (2156), Expect = 0.0, Method: Composition-based stats. Identities = 128/659 (19%), Positives = 242/659 (36%), Gaps = 26/659 (3%) Query: 457 RMFELYEIPPHIKPNWQVWYEC--VLPEDR---QHAEKVIRDSLQSRSPFKLEFRITVKD 511 + + + P + + +K+ I Sbjct: 260 AWQHIGGHTQGQFMTADGLWTFASIYPASITPSKRVAYSADFNATQNLDWKVVRHIPRAQ 319 Query: 512 GIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCI 571 + + L R++ + L+ + + L + R+ T E+++ Sbjct: 320 LLSRTKVLGERLIPVSTLLLGLIFFSSLKHARTHVRAQLAETDLRIAATAFESEESMIIT 379 Query: 572 DMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQD 631 D I +N V +G+T EEA+G + T + ++ + + Sbjct: 380 DSRGIILKVNQVFTATTGYTSEEAVGKTPSLLK--TDRHSAEFYHEMWRQIKQTGKWQGE 437 Query: 632 VVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLA 691 + ++G Y +I + + +G V D+TE + ++ A +D LT L Sbjct: 438 IWDKRKNGEIYPKLLNIYAVKSKNGVVTHYVGSYTDLTERKMAEEKIISLAFYDTLTGLP 497 Query: 692 NRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSML 751 NR +L L + T + AL+FIDLD+FK +ND+ GH GD LL+++A + + + Sbjct: 498 NRRLLLDRLNYALASGLRTGKNGALLFIDLDKFKTLNDTLGHDIGDLLLKQVAHRLKACV 557 Query: 752 RSSDVLARLGGDEFGLLLPDCNVESARFIA------TRIISAVNDYHFIWEGRVHRVGAS 805 R D +AR+GGDEF ++L D N+ES A +I++A+ + S Sbjct: 558 REIDTVARIGGDEFVVMLEDLNIESVEAAAQTEVIGEKILAAL-RMPYQLLTNEFHSSVS 616 Query: 806 AGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRM 865 GI+L +N E + QADIA Y +K GR ++ ++ + S RA + + + + Sbjct: 617 IGISLFSNNGQSQDEPLKQADIAMYQAKKSGRNKLRFFDQRMQDTISSRANLEAELR-KA 675 Query: 866 IKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDR 924 + QL + + L W II F + L + Sbjct: 676 LANEQLQLHYQIQVDSAHQT---IGAEVLLRWIHPVNGIISPAQFVPVAEETGLILPIGL 732 Query: 925 RVFHEFFQQAAKAVASK---GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLII 981 V Q K + + +++ +S ++ +E + P LL L + Sbjct: 733 WVLETACAQLKKWQDNPATAQLILAINVSARQFHQNGFATEVRSVIERHDINPALLKLEL 792 Query: 982 PAEAILDHAE----SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQ 1037 +L++ + +++ L+ G + L G LK L +D ++ Sbjct: 793 TEGMLLNNLDDTIATMRSLQEFGVQFSLDDFGTGYSSLQYLKRLPLAQLKIDQSFVRDLA 852 Query: 1038 GNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 D+ ++ I A L + IA V + L G + P++ Sbjct: 853 TGYNDQAIVRTIIAMAHSLNLNVIAEGVETEIQRQILLKNQCSHFQGYLFGKPMPIEQF 911 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 66/175 (37%), Gaps = 1/175 (0%) Query: 270 WLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNK 329 +P +LL + + +A R ++E++ S M + + G L+ N+ Sbjct: 331 LIPVSTLLLGLIFFSSLKHARTHVRAQLAETDLRIAATAFESEESMIITDSRGIILKVNQ 390 Query: 330 ALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVW 389 GY+ EE G T L + ++ + I + + E +NG++ Sbjct: 391 VFTATTGYTSEEAVGKTPSLLKTDRHSAEFYHEMWRQIK-QTGKWQGEIWDKRKNGEIYP 449 Query: 390 ALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWE 444 LL + V+ +G +++ D+ E K E+ L TL + + Sbjct: 450 KLLNIYAVKSKNGVVTHYVGSYTDLTERKMAEEKIISLAFYDTLTGLPNRRLLLD 504 Score = 53.9 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 37/137 (27%), Gaps = 2/137 (1%) Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQV 474 + + RI + + + I ++ Sbjct: 349 HARTHVRAQLAETDLRIAATAFESEESMIITDSRGIILKVNQVFTATTGYTSEEAVGKTP 408 Query: 475 WYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHI-RALANRVLNKEGEVERL 533 + ++ R Q+ ++ E K+G + V +K G V Sbjct: 409 SLLKTDRHSAEFYHEMWRQIKQTGK-WQGEIWDKRKNGEIYPKLLNIYAVKSKNGVVTHY 467 Query: 534 LGINMDMTEVKQLNEAL 550 +G D+TE K E + Sbjct: 468 VGSYTDLTERKMAEEKI 484 >UniRef50_C5V0L7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0L7_9PROT Length = 951 Score = 834 bits (2156), Expect = 0.0, Method: Composition-based stats. Identities = 158/707 (22%), Positives = 284/707 (40%), Gaps = 31/707 (4%) Query: 408 IAQIEDINELKRTEQ-VNQQLME-RITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI- 464 + + D L+ TE QQ + ++ A + G G WE +L +W + +F L+EI Sbjct: 236 LGRSFDTMALRVTENIALQQRAQDFLSEAQKIGHFGSWELDLHSGRLNWSEEIFRLFEID 295 Query: 465 PPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRV 523 P P+ + + + PEDR+ + +SL ++ + + R+ + DG ++ + A + Sbjct: 296 PAQFSPSHEAFLSIIHPEDREAVNQAYTNSLTNKQSYHITHRLIMADGRVKWVEARGSNY 355 Query: 524 LNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPV 583 + EG R G D+T ++ L R+ EA++ D I +N Sbjct: 356 FDPEGRAIRSAGTVQDVTFREEAATQL-----RIAAVAFDTQEAIMVTDKEANIIKVNHS 410 Query: 584 AEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYD 643 E +G++++E LG + + N ++++ + ++ ++G Y Sbjct: 411 FELTTGFSEQEVLGKNPRLL--GSGRHNQDFYKSMWEVLNRVGSWSGELWDRRKNGEIYP 468 Query: 644 VHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRIL 703 +IT + D V V D+TE +K ++ A D LT L NR ++R+ Sbjct: 469 KWLTITAVKNRD-EISHYVGVFVDITERKKAEEEIHNLAFFDPLTQLPNRRLLLDRMRLA 527 Query: 704 LQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGD 763 L + AL+FIDLD FK +ND+ GH GD +L E++ + LR +D +AR GGD Sbjct: 528 LGLSARSKNFGALMFIDLDHFKVLNDTKGHEYGDKMLIEVSHRLTQSLRDTDSVARFGGD 587 Query: 764 EFGLLLP------DCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQ 817 EF +LL D V A IA ++ +++ +I E H S G+ L + + + Sbjct: 588 EFVVLLESLSVNQDIAVAQAGSIAEKMRESLSQT-YIIESYAHESTPSIGVVLFNGDAIE 646 Query: 818 AAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHG 877 E++ +AD+A Y +K GR V +E A R M + + + ++ + Sbjct: 647 IDELLKRADLAMYQAKESGRNTVRFFESAMQATLESRTLMERALR-QALSNSEFELYYQV 705 Query: 878 VASPRIPEARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAK 936 + L L W + I F L + V + Sbjct: 706 QTNQA---NELLGAEVLLRWHSQSLGPISPAQFIPLAEQTKLILPIGEWVLENACARLKA 762 Query: 937 AVASK---GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE-- 991 + +++ +S V + L +S + PR L L + +L+ + Sbjct: 763 WETHPTLSKLRLAVNISPVQFHQPDFVRQVQAALTDSGVNPRRLELELTENLVLEDVDEA 822 Query: 992 --SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITII 1049 + L+ G R + G +K D L +D ++ + D M++ I Sbjct: 823 IQKMSALKALGVRFSMDDFGTGYSSLQYIKRLPIDQLKIDQSFVRDILTDPGDAMMVQTI 882 Query: 1050 QGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 G A+ G + IA V + L G + G + L Sbjct: 883 AGMARNFGYEVIAEGVEEHAQLLPLIERGCNTFQGYFFSRPVALAEF 929 Score = 119 bits (300), Expect = 6e-25, Method: Composition-based stats. Identities = 21/162 (12%), Positives = 56/162 (34%), Gaps = 7/162 (4%) Query: 277 LLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLG 336 + + + + + + + E ++ N + G Sbjct: 362 AIRSAGTVQDVTFREEAATQL-----RIAAVAFDTQEAIMVTDKEANIIKVNHSFELTTG 416 Query: 337 YSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSL 396 +S++E+ G + L + + +++ + ++S E +NG++ L ++ Sbjct: 417 FSEQEVLGKNPRLLGSGRHNQDFYKSMWEVL-NRVGSWSGELWDRRKNGEIYPKWLTITA 475 Query: 397 VRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAG 438 V++ D +++ DI E K+ E+ L L Sbjct: 476 VKNRD-EISHYVGVFVDITERKKAEEEIHNLAFFDPLTQLPN 516 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 44/344 (12%), Positives = 105/344 (30%), Gaps = 26/344 (7%) Query: 225 WSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLL------ILL 278 + + IF+ + S ++ +L T R L+S + L Sbjct: 169 LQKAKQETLMQTAIFVAISLFASFVIGILLHVLVTRRVNLLSAISKQFAAGNYNARSELK 228 Query: 279 PANIMTMVMYAFRAERKHISESETHFRNAMEYSAI-------GMALVGTEGQWLQTNKAL 331 + ++ + +F ++E+ + A ++ + G + L ++ + Sbjct: 229 GNDELSELGRSFDTMALRVTENIALQQRAQDFLSEAQKIGHFGSWELDLHSGRLNWSEEI 288 Query: 332 CQFLGYSQEELRGLT--FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVW 389 + + F + PED Q ++ + +Y + R +G V W Sbjct: 289 FRLFEIDPAQFSPSHEAFLSIIHPEDREAVNQAYTNSLTNK-QSYHITHRLIMADGRVKW 347 Query: 390 ALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKP 449 S +G + ++D+ + + I + + Sbjct: 348 VEARGSNYFDPEGRAIRSAGTVQDVTFREEAATQLRIAAVAFD-----TQEAIMVTDKEA 402 Query: 450 NIFSWDKRMFELYEIPPHIKPNW--QVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRI 507 NI + ++ +D K + + L + E Sbjct: 403 NIIKVNHSFELTTGFSEQEVLGKNPRLLGSGRHNQD---FYKSMWEVLNRVGSWSGELWD 459 Query: 508 TVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALF 551 K+G + + L + E+ +G+ +D+TE K+ E + Sbjct: 460 RRKNGEIYPKWLTITAVKNRDEISHYVGVFVDITERKKAEEEIH 503 >UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0ACK6_ALHEH Length = 857 Score = 834 bits (2156), Expect = 0.0, Method: Composition-based stats. Identities = 161/836 (19%), Positives = 302/836 (36%), Gaps = 53/836 (6%) Query: 304 FRNAMEYSAIGMALVGTEG---QWLQTNKALCQFLGYSQEELRGLT--FQQLTWPEDLNK 358 +E S + +G + + + + + LGY + ++Q P+D + Sbjct: 21 LHRVLEASPAVTYALTRDGQSLRPVYISAHIEELLGYPVADWMADPQFWRQCLHPDDRER 80 Query: 359 DLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELK 418 L Q + + E R +R+G W + L+ DG P + +DI Sbjct: 81 VLAQSARHL--PEGLVDHEYRVRHRDGSYRWVHDRLRLMPARDGRPAMAVGVWQDITHRA 138 Query: 419 RTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYEC 478 R +++ + L L G + ++ + D R L E+P H Sbjct: 139 RADRLLRTLSH---LTARVTGDDFFRTLVRHLAEALDMRYVLLGELPGHPPTRVHTRALY 195 Query: 479 VLPEDRQHAEKVIR----DSLQSRSPFKLEFRITVKDGIRHIR-------ALANRVLNKE 527 R + + + S P + + + + Sbjct: 196 ADGAIRPNVTYPLAGTPCARVLSDEPCHYANDVCRDFPEDELLREMAVESYFGVPIRRAD 255 Query: 528 GEVERLLGINMD------MTEV------------KQLNEALFQEKERLHITLDSIGEAVV 569 G + LL + D TE + ++ + + + +A++ Sbjct: 256 GTITGLLALMHDQPREISATERAVIALFAARAGTELARHQAEEQLQLIDQVFEGSRDAII 315 Query: 570 CIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIE 629 D +I +NP E +SG+ +EE +G + + ++ A SR + Sbjct: 316 ITDAQTRILQVNPAFEAISGYREEELVGRTPRLLQ--SGHQGPRFYREMWEALKSRGHWQ 373 Query: 630 QDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTH 689 ++ G +Y S++ ++ + + + D+T + + + Y A +D LT Sbjct: 374 GELWNRRADGETYPSLLSVSAVTNDNDEVTHYIGIASDITSHKAAEQHIDYLAHYDTLTG 433 Query: 690 LANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLS 749 L NR E++L +L+ + AL F+DLDRFK +ND+ GH +GD LL E+A + Sbjct: 434 LGNRRLLEEELERMLRNA-RGGRPFALFFLDLDRFKNINDTLGHESGDRLLEEVADRLRD 492 Query: 750 MLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGIT 809 + L R+GGDEF +L P + IA +++ ++ + R V S G+ Sbjct: 493 LAGPQATLCRIGGDEFAILAPGLSHRQTAGIARQLVEGISR-PYEITERPLVVTCSVGVA 551 Query: 810 LIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKEN 869 + + + ++S AD A + K G +EP AA +ER + D + + Sbjct: 552 VHPRDGTRREALISAADTALHYVKAHGSNHYQFHEPGMTAAAAERLHLENDLR-EALLRG 610 Query: 870 QLMMLAHGVASPRIPEARNLWLISLKLWSCEG-EIIDEQTFRRSFSDPALSHALDRRVFH 928 + + V +L W +I F + L + V Sbjct: 611 EFELYYQPVLDTERLT--VCGAEALLRWHHPEAGLIPPDRFIPLAEETGLIRPIGTWVLR 668 Query: 929 EFFQQAAKAVASK--GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAI 986 E QAA+ G+++S+ +S L + + LE L P L L I + Sbjct: 669 EACAQAARWRRLGLTGMTVSVNVSGEQFWRDELPQAVRQALEAQALAPDALVLEITESVL 728 Query: 987 LD---HAE-SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMD 1042 + + E +++L+ G + L G + LK D L +D ++ + D Sbjct: 729 MHGSANTETRLRELKAMGVGLSLDDFGTGYSSLSYLKRFPIDTLKIDKSFVRDMVRDEHD 788 Query: 1043 EMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 L + LG++ +A V + L D + G + P L Sbjct: 789 RTLAQTVIAMGHGLGLQVVAEGVESAEHLPLLRRARCDRVQGYHFSRPLPARALSR 844 Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 88/285 (30%), Gaps = 8/285 (2%) Query: 262 TYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTE 321 + H + R E E S + + + Sbjct: 261 LLALMHDQPREISATERAVIALFAARAGTELARHQAEEQLQLIDQVFEGSRDAIIITDAQ 320 Query: 322 GQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYY 381 + LQ N A GY +EEL G T + L + +++ + + + E Sbjct: 321 TRILQVNPAFEAISGYREEELVGRTPRLLQSGHQGPRFYREMWEALKSR-GHWQGELWNR 379 Query: 382 NRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIG 441 +G+ +LL+VS V + + ++I DI K EQ L TL Sbjct: 380 RADGETYPSLLSVSAVTNDNDEVTHYIGIASDITSHKAAEQHIDYLAHYDTLTGLGNRR- 438 Query: 442 IWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPF 501 E + + R + + ++ + + E + + D L+ + Sbjct: 439 --LLEEELERMLRNARGGRPFALFFLDLDRFKNINDTLGHESGDRLLEEVADRLRDLAGP 496 Query: 502 KLEFRITVKDGIRHIRALANRVLNKEGEVERLL-GINM--DMTEV 543 + + I A G +L+ GI+ ++TE Sbjct: 497 QATL-CRIGGDEFAILAPGLSHRQTAGIARQLVEGISRPYEITER 540 >UniRef50_A6WKV6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Shewanella RepID=A6WKV6_SHEB8 Length = 921 Score = 833 bits (2153), Expect = 0.0, Method: Composition-based stats. Identities = 139/713 (19%), Positives = 272/713 (38%), Gaps = 20/713 (2%) Query: 394 VSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFS 453 L+ + L I E + ++ IW + Sbjct: 214 AKLISDSIQRQLGEILSQHSAAEALSRGAPTCVDTVDLQTFIDSFEEHIWMKNVAGIYTL 273 Query: 454 WDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD-- 511 ++ + + +E+P E E + R +++S P + + + Sbjct: 274 CNRSVEKAWEMPRSEIVGKSD-VELFGAEIANIFLEGDRLAIESGMPIIVAECLDGNEAK 332 Query: 512 GIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCI 571 + L LN +GE ++G+ ++++ K++ E L + E VV Sbjct: 333 NHLWLETLKLPTLNPQGEFVGVIGMTRNISKHKEVEEQLT----LATNVFKNSVEGVVVT 388 Query: 572 DMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQD 631 D IT +N +++G+ +EE LG + + + +++A + + Sbjct: 389 DRHGNITDVNGAFFEITGYVREELLGQNPRIF--SSGRHDKAFFDKLWNALLANGKWNGE 446 Query: 632 VVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLA 691 + ++G + + +I+ + G V V D++ ++ QL++ A D LTHL Sbjct: 447 IWNRRKNGTIFPQNITISTIYDEVGDVRYFVAVFADISAQKENEAQLTHLAYFDPLTHLP 506 Query: 692 NRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSML 751 NR F QL+ ++ + + A V ID+D FK +NDS GH+ GD +L ELA + S + Sbjct: 507 NRMKFMMQLKQEVRQAKRLNLQLATVMIDVDLFKHINDSFGHSIGDEMLVELAKRLRSQV 566 Query: 752 RSSDVLARLGGDEFGLLLPDCNVESARFIA-TRIISAVNDYHFIWEGRVHRVGASAGITL 810 DVL+R+GGDEF L+ + +A ++ + G R+ AS G++L Sbjct: 567 GDQDVLSRIGGDEFVALISGIDNNEDATVAINQLRQVFEQPFIVSTGDHLRLTASMGVSL 626 Query: 811 IDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQ 870 ++ A ++ AD A Y +KN GR Y E + + I++N Sbjct: 627 YPNDGTDADTLLRNADAAMYRAKNDGRNNYAFYTESLTQQSFEHLKLQSAL-YGAIEQNA 685 Query: 871 LMMLAHGVASPRIPEARNLWLISLKLWS-CEGEIIDEQTFRRSFSDPALSHALDRRVFHE 929 L ++ + + + +L W + +I F L H + V Sbjct: 686 LYLMYQPKLD--LVSRKTVGFEALLRWHDPQLGLISPAVFIPVAEKIGLIHEIGLWVLET 743 Query: 930 FFQQAAKAVASKG--ISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAIL 987 +Q + + I++ ++ L ++ V+D+ L + LP + L L + ++ Sbjct: 744 ACRQGMRWLREGKHFGRIAVNVAGQQLQRSSFVDDVKRVLAETGLPAKHLELEVTESVMM 803 Query: 988 DHAE----SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDE 1043 + + +++L G + + G N LK L +D ++ + + Sbjct: 804 QNPDLAIRDLKRLGDLGIELSVDDFGTGYSSLNYLKKLPIHKLKIDQSFVRDIPFDTNNT 863 Query: 1044 MLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 + + L + IA V D L D G + + Q + L Sbjct: 864 AIAKAVIALGHALKLDIIAEGVETKEQADFLQQNQCDQAQGYLFSRPQLPEDL 916 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 54/154 (35%), Gaps = 1/154 (0%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 M ++ K + E T N + S G+ + G N A + GY +EEL G Sbjct: 357 MTRNISKHKEVEEQLTLATNVFKNSVEGVVVTDRHGNITDVNGAFFEITGYVREELLGQN 416 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 + + ++ + ++ E +NG + + +S + G Y Sbjct: 417 PRIFSSGRHDKAFFDKLWNALLAN-GKWNGEIWNRRKNGTIFPQNITISTIYDEVGDVRY 475 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGI 440 F+A DI+ K E L L + + Sbjct: 476 FVAVFADISAQKENEAQLTHLAYFDPLTHLPNRM 509 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 33/252 (13%), Positives = 80/252 (31%), Gaps = 14/252 (5%) Query: 304 FRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQV 363 + ++ + + G + N+++ + + E+ G + +L E N L+ Sbjct: 251 LQTFIDSFEEHIWMKNVAGIYTLCNRSVEKAWEMPRSEIVGKSDVELFGAEIANIFLEGD 310 Query: 364 EKLISGEINTYSMEKRYYNRNGDV----VWALLAVSLVRHTDGTPLYFIAQIEDINELKR 419 I + E +G+ +W + G + I +I++ K Sbjct: 311 RLAIESGMPIIVAE----CLDGNEAKNHLWLETLKLPTLNPQGEFVGVIGMTRNISKHKE 366 Query: 420 TEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECV 479 E+ + G+ + NI + FE+ Sbjct: 367 VEEQLTLATN----VFKNSVEGVVVTDRHGNITDVNGAFFEITGYVREELLGQNPRIFSS 422 Query: 480 LPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIR-ALANRVLNKEGEVERLLGINM 538 D+ +K+ L + + E K+G + + + ++ G+V + + Sbjct: 423 GRHDKAFFDKLWNALLANGK-WNGEIWNRRKNGTIFPQNITISTIYDEVGDVRYFVAVFA 481 Query: 539 DMTEVKQLNEAL 550 D++ K+ L Sbjct: 482 DISAQKENEAQL 493 >UniRef50_Q55576 Slr0359 protein n=2 Tax=Cyanobacteria RepID=Q55576_SYNY3 Length = 1244 Score = 833 bits (2153), Expect = 0.0, Method: Composition-based stats. Identities = 170/844 (20%), Positives = 315/844 (37%), Gaps = 48/844 (5%) Query: 276 ILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFL 335 L+ + + + + + SE F + + G+ +V EG N A + Sbjct: 402 FLVNFIGIQTDVTQQKLAEQQLRASEEFFSSMIVTITDGLLIVDQEGIIQFVNPAAREMF 461 Query: 336 GYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVS 395 + EL F + Q + E +G +V A + VS Sbjct: 462 KRQEGELLQQPFG-------IPFVADQ------------ATEITLTPLDGSMVVAEMRVS 502 Query: 396 LVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWD 455 + G F+ + DI E + + ++ E GIW + + Sbjct: 503 PIHWQKGKA--FLVSLRDITEQHQARLALAESEKKYRYIVELTSEGIWILDQDQQTTFAN 560 Query: 456 KRMFELYEIPPHIKP--NWQVWYECVL--PEDRQHAEKVIRDSLQ-----SRSPFKLEFR 506 +++ ++ N + + PE + +K ++ + + ++F+ Sbjct: 561 QQLADMLGYSVQEILEKNITAFVLVIHHLPESQNSHQKTLQSFPRCVLPNHGQVYDVQFQ 620 Query: 507 ITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGE 566 + + ++ G L + D+T+ K +AL ++RL L SI + Sbjct: 621 -RRDGSVLWGLVSRSAWYDQWGNYRGELAMLTDITKRKSAEQALSASEQRLEGILGSIQD 679 Query: 567 AVVCIDM-AMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSR 625 V D + ++NP + G + E + L+E + Sbjct: 680 VVWSADAVSFATLYLNPTTAMVYGQSL-EVCYQSQNFWFEQVHPGDRLLLEYHLQLLMEK 738 Query: 626 SAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHD 685 E + + G + + + + + D+TE + +L Y+A+HD Sbjct: 739 DQTELEYRIVQPGGKERWLFRRSQLVRDGEHQPLRIDSIDSDITERKLAAEKLHYNANHD 798 Query: 686 ALTHLANRASFEKQLRILLQTV-NSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELA 744 +LT+L NR+ F +L LQ R A++F+DLD FK +NDS GH+ GD LL+ +A Sbjct: 799 SLTNLPNRSMFLDRLGHALQRNLRRRDLRFAVLFLDLDGFKIINDSLGHSCGDLLLQGIA 858 Query: 745 SLMLSMLRSSDVLARLGGDEFGLLLPDCN-VESARFIATRIISAVNDYHFIWEGRVHRVG 803 + LR D LARLGGDEF +L+ + E +A RI + F G+ Sbjct: 859 HRLRQCLRPEDTLARLGGDEFTMLIENITCPEDVIAVAQRIHQEL-QKPFNLNGQEIFTN 917 Query: 804 ASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQW 863 S GI L + +V+ AD A Y +K G+GR ++ +R D + Sbjct: 918 TSIGIALNHPHYGHPQDVLRDADTAMYRAKAAGKGRYAIFNQTMHHHAVQRLQRENDLR- 976 Query: 864 RMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHAL 922 R I +L + + + + + +L W E +I + F + L + Sbjct: 977 RAIDRQELQLHYQPIVCLK--TGQLQGVEALVRWQHPEEGLILPEEFVAIAEETGLIVPM 1034 Query: 923 DRRVFHEFFQQA----AKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLH 978 + E +Q + +S+ +S L L+ + E L ++ L P+ L Sbjct: 1035 GDWILWEASRQILELKQSFPQLSHLQVSINVSSRQLRDQRLLKTVDEILSSTNLAPQDLK 1094 Query: 979 LIIPAEAILDH----AESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCA 1034 L I ++D+ A+ ++ LR +I L G + L + + +D Sbjct: 1095 LEITESLLIDNLNLAADVLKSLRQRNIQISLDDFGTGYSSLSYLHRFPINTIKVDRSFVN 1154 Query: 1035 NVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLD 1094 ++ N + ++ I A LG+ IA + + L +G D G A P + Sbjct: 1155 TMEPNNQNTAIVHTIVTLAHTLGLDVIAEGIETERHLTQLHWLGCDAGQGYYFARPIPSE 1214 Query: 1095 LLVN 1098 L++ Sbjct: 1215 DLLD 1218 Score = 221 bits (565), Expect = 9e-56, Method: Composition-based stats. Identities = 73/465 (15%), Positives = 154/465 (33%), Gaps = 43/465 (9%) Query: 226 SAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTM 285 ++ L + V T R + + +L +L A I Sbjct: 230 ASPLLHNLGIVSGINLMVAGPRTAFGVLGVYSLTARKFTEEEIEFLKVASHILAAAI--- 286 Query: 286 VMYAFRAERKHISESETHFRNAMEYSAIGMALVGT---EGQWLQTNKALCQFLGYSQEEL 342 +R+ E + A++ S+ G+ + + + N+ G+++EE+ Sbjct: 287 -------DRQEYEERLLLLQQAIDASSNGILITDALGSDNAVVYANQGFETITGFNREEV 339 Query: 343 RGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKR--YYNRNGDVVWALLAVSLVRHT 400 G + L + + +Q+EKL + + E Y ++G W L +S + + Sbjct: 340 IGQNCRFLLNEDRQGEQNKQLEKLRTAIAHGQECEVVLKNYRKDGASFWNHLYLSPIYNQ 399 Query: 401 DGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFE 460 + FI D+ + K EQ + E + G+ + + I + E Sbjct: 400 QNFLVNFIGIQTDVTQQKLAEQQLRASEEFFSSMIVTITDGLLIVDQEGIIQFVNPAARE 459 Query: 461 LYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA 520 +++ V D+ I + S E R+ Sbjct: 460 MFKRQEGELLQQPFGIPFV--ADQA---TEITLTPLDGSMVVAEMRV------------- 501 Query: 521 NRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFM 580 + + ++G+ L D+TE Q AL + +++ ++ E + +D + TF Sbjct: 502 SPIHWQKGKA--FLVSLRDITEQHQARLALAESEKKYRYIVELTSEGIWILDQDQQTTFA 559 Query: 581 NPVAEKMSGWTQEEALGVPLLTVLHITFG-------DNGPLMENIYSADTSRSAIEQDVV 633 N M G++ +E L + + + L + + DV Sbjct: 560 NQQLADMLGYSVQEILEKNITAFVLVIHHLPESQNSHQKTLQSFPRCVLPNHGQVY-DVQ 618 Query: 634 LHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQL 678 R G S + G+ G + ++ D+T+ + + L Sbjct: 619 FQRRDGSVLWGLVSRSAWYDQWGNYRGELAMLTDITKRKSAEQAL 663 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 59/155 (38%), Gaps = 4/155 (2%) Query: 529 EVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDM---AMKITFMNPVAE 585 E L + + + + L +D+ ++ D + + N E Sbjct: 270 EEIEFLKVASHILAAAIDRQEYEERLLLLQQAIDASSNGILITDALGSDNAVVYANQGFE 329 Query: 586 KMSGWTQEEALGVPLLTVLHIT-FGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDV 644 ++G+ +EE +G +L+ G+ +E + +A E + + + G S+ Sbjct: 330 TITGFNREEVIGQNCRFLLNEDRQGEQNKQLEKLRTAIAHGQECEVVLKNYRKDGASFWN 389 Query: 645 HYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLS 679 H ++P+ + + + DVT+ + +QL Sbjct: 390 HLYLSPIYNQQNFLVNFIGIQTDVTQQKLAEQQLR 424 >UniRef50_B0UG16 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium sp. 4-46 RepID=B0UG16_METS4 Length = 990 Score = 833 bits (2153), Expect = 0.0, Method: Composition-based stats. Identities = 194/839 (23%), Positives = 346/839 (41%), Gaps = 30/839 (3%) Query: 280 ANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGT-EGQWLQTNKALCQFLGYS 338 A + + + ++ SE +R + + ++ +G+ L N + G Sbjct: 128 AVRTYTDITDRKRAEQQVAASEARYRALADGLPQMVWVMRASDGELLYRNARFAHYYG-E 186 Query: 339 QEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVR 398 RG + + P+D + + + + E + +E R +G W L VR Sbjct: 187 IGTARGERV-ERSHPDDAARVAAEWARCRA-EGCPFEIEVRLRRHDGVHRWHKLVKIPVR 244 Query: 399 HTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRM 458 H G + F+ DI E+ + + +R+ LA EA G G+++W L Sbjct: 245 HA-GETVEFLGTALDIEEIVAGREALRVTTDRLRLAQEAAGAGLFDWSLIDGSALLSPET 303 Query: 459 FELYEIPPH--IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGI-RH 515 L+ +P + W + P+D R ++ + + ++EFRI + DG R Sbjct: 304 LRLFNLPEDRATRVTQAEWAAAMHPDDLPVLAAETRRAVATGTTLRVEFRIPLPDGSDRW 363 Query: 516 IRALANRVLNKEGEVERLLGINMDMTEVKQLNEA-------LFQEKERLHITLDSIGEAV 568 I + + +G R++GI++D+T+ K+ +A L +ERL + L+S + + Sbjct: 364 IMGTGRVMADGDGRAVRVVGISIDVTDRKRAEQARQASEAALRVSEERLALALESGSDGL 423 Query: 569 VCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADT-SRSA 627 D+ ++++ M G+ + E + + D ++ + + Sbjct: 424 WDCDLTTGTSWVSDQWLTMLGYRKGELDAGYETWLRLLHPDDREAVLARVRDHLEGRTPS 483 Query: 628 IEQDVVLHCRSGGSYDVHYSITPL-STLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDA 686 E + + + GG + + DG+ V D+T ++ ++++ A HD Sbjct: 484 YECEQRMRRKDGGWAWILERGKVVSRAPDGTARRVVGTHIDITARKEAEARVTHMARHDT 543 Query: 687 LTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASL 746 LT L NRA F ++L L + L+ +DLD FKAVNDS GH AGDALLRE+A Sbjct: 544 LTDLPNRALFRERLEQRLAEIRRHGGHCVLLALDLDAFKAVNDSLGHLAGDALLREIARR 603 Query: 747 MLSMLRSSDVLARLGGDEFGLLLPDCNV-ESARFIATRIISAVNDYHFIWEGRVHRVGAS 805 S+LR+ D +ARLGGDEF +LL ES A R++++V + EG+ VG S Sbjct: 604 FRSVLRAEDTVARLGGDEFAILLGGTPRLESVMDFAERLVASVRE-PVTLEGQQVGVGVS 662 Query: 806 AGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRM 865 GI + ++ A + AD A Y +K+ GR +EP A ER + LD Q Sbjct: 663 IGIAIGPEHGEDADTLFRHADRALYRAKSDGRNTFRFFEPAMDRAAEERRRLELDLQL-A 721 Query: 866 IKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDR 924 ++ + ++ V + + +L W + F + L AL Sbjct: 722 LRRGEFVLHYQPVLDV--ASRAIVAVEALVRWNHPTRGQLGPGVFIPLAEETGLIVALGE 779 Query: 925 RVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAE 984 V + A + +++ +S + A+L + L+ + L P L L I Sbjct: 780 WVLRTATRDARHLPE--HVRVAVNISAVQVRHASLGQTVRAALDAAALSPDRLELEITES 837 Query: 985 AILDHA----ESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNL 1040 ++ + +++ LR G + L G + L+ D L +D A++ + Sbjct: 838 VLMGDSSLVRDALSGLRELGTHLALDDFGTGYSSLSYLRQYPFDRLKVDRSFIASIP-DQ 896 Query: 1041 MDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNS 1099 ++ I G LGM A V P + G + G + QPL L+ + Sbjct: 897 GTVTILRAIVGLGTGLGMTVTAEGVETPAQFAFVEAEGCAQVQGYLTGKPQPLPDLLAT 955 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 70/413 (16%), Positives = 136/413 (32%), Gaps = 26/413 (6%) Query: 302 THFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDL- 360 +E G+ ++ EG N + + L E +R L +D Sbjct: 24 ALLPAVLETMDQGLMMIDAEGVVRVCNGRVIEMLDLPPEMMRAQPSFDQVRQYQLGRDEF 83 Query: 361 ----QQVEKLISGEI-NTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDIN 415 ++ + ++ NG + L + V G + DI Sbjct: 84 RRSPKEFRQWVADTGLRPRHHVYERERPNGRI----LEIRTVPLPGG---GAVRTYTDIT 136 Query: 416 ELKRTEQVNQQLMERITLANEAGGIGIWEWELKPN-IFSWDKRMFELYEIPPHIKPNWQV 474 + KR EQ R + +W + + R Y I Sbjct: 137 DRKRAEQQVAASEARYRALADGLPQMVWVMRASDGELLYRNARFAHYYG---EIGTARGE 193 Query: 475 WYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLL 534 E P+D PF++E R+ DG+ L + GE L Sbjct: 194 RVERSHPDDAARVAAEWARCRAEGCPFEIEVRLRRHDGVHRWHKLVKIPVRHAGETVEFL 253 Query: 535 GINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEE 594 G +D+ E+ EAL +RL + ++ G + + ++P ++ ++ Sbjct: 254 GTALDIEEIVAGREALRVTTDRLRLAQEAAGAGLFDWSLIDGSALLSPETLRLFNLPEDR 313 Query: 595 ALGVPLLTVLHITFGDNGPLM-ENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLST 653 A V D+ P++ A + + + + + G + + ++ Sbjct: 314 ATRVTQAEWAAAMHPDDLPVLAAETRRAVATGTTLRVEFRIPLPDGSDRWIMGTGRVMAD 373 Query: 654 LDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQT 706 DG + V + DVT+ ++ + + AS AL R S E++L + L++ Sbjct: 374 GDGRAVRVVGISIDVTDRKRAEQ--ARQASEAAL-----RVS-EERLALALES 418 Score = 164 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 52/287 (18%), Positives = 107/287 (37%), Gaps = 15/287 (5%) Query: 277 LLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLG 336 + + + A R+ + + R A E + G+ + + Sbjct: 249 TVEFLGTALDIEEIVAGREALRVTTDRLRLAQEAAGAGLFDWSLIDGSALLSPETLRLFN 308 Query: 337 YSQEELRGLT---FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLA 393 ++ +T + P+DL + + ++ T +E R +G W + Sbjct: 309 LPEDRATRVTQAEWAAAMHPDDLPVLAAETRRAVA-TGTTLRVEFRIPLPDGSDRWIMGT 367 Query: 394 VSLVRHTDGTPLYFIAQIEDINELKRTEQ-------VNQQLMERITLANEAGGIGIWEWE 446 ++ DG + + D+ + KR EQ + ER+ LA E+G G+W+ + Sbjct: 368 GRVMADGDGRAVRVVGISIDVTDRKRAEQARQASEAALRVSEERLALALESGSDGLWDCD 427 Query: 447 LKPNIFSWDKRMFELYEIPPHIKP-NWQVWYECVLPEDRQHAEKVIRDSLQSRSP-FKLE 504 L + + ++ W + P+DR+ +RD L+ R+P ++ E Sbjct: 428 LTTGTSWVSDQWLTMLGYRKGELDAGYETWLRLLHPDDREAVLARVRDHLEGRTPSYECE 487 Query: 505 FRITVKDGIRHIRALANRV--LNKEGEVERLLGINMDMTEVKQLNEA 549 R+ KDG +V +G R++G ++D+T K+ Sbjct: 488 QRMRRKDGGWAWILERGKVVSRAPDGTARRVVGTHIDITARKEAEAR 534 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 51/307 (16%), Positives = 90/307 (29%), Gaps = 4/307 (1%) Query: 213 PWPFTFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLP 272 W L A R A L + L +D ++ T R + Sbjct: 321 EWAAAMHPDDLPVLAAETRRAVATGTTLRVEFRIPLPDGSDRWIMGTGRVMADGDGRAVR 380 Query: 273 FLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALC 332 + I + A +A + SE A+E + G+ + Sbjct: 381 VVGISIDVTDRKRAEQARQASEAALRVSEERLALALESGSDGLWDCDLTTGTSWVSDQWL 440 Query: 333 QFLGYSQEELRG--LTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWA 390 LGY + EL T+ +L P+D L +V + G +Y E+R ++G W Sbjct: 441 TMLGYRKGELDAGYETWLRLLHPDDREAVLARVRDHLEGRTPSYECEQRMRRKDGGWAWI 500 Query: 391 LLAVSLV-RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKP 449 L +V R DGT + DI K E + TL + ++ L+ Sbjct: 501 LERGKVVSRAPDGTARRVVGTHIDITARKEAEARVTHMARHDTLT-DLPNRALFRERLEQ 559 Query: 450 NIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITV 509 + + + + V ++ R R+ Sbjct: 560 RLAEIRRHGGHCVLLALDLDAFKAVNDSLGHLAGDALLREIARRFRSVLRAEDTVARLGG 619 Query: 510 KDGIRHI 516 + + Sbjct: 620 DEFAILL 626 >UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4K931_THASP Length = 855 Score = 833 bits (2153), Expect = 0.0, Method: Composition-based stats. Identities = 148/774 (19%), Positives = 287/774 (37%), Gaps = 60/774 (7%) Query: 365 KLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVN 424 +++S + + R+ + +V G + ++Q D+ + + Sbjct: 98 RVVSTATPLHELTVRFR-------EEHVRHYVVEDETGRRVGIVSQ-TDVVLNQGIKHYL 149 Query: 425 QQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFE------LYEIPPHIKPNWQVWYEC 478 + + + G+ + +RM E + + Y Sbjct: 150 K-----LRRVDALVKGGLHALPAAAGLGEATRRMREGGVDAVVVDYGAADASAPAGRYGI 204 Query: 479 VLPEDRQHAEKVIRDSLQSR----------SPFKLEFRITVKDGIRHIRALANRVLNKEG 528 + D +R+ + RHIR + VL+ EG Sbjct: 205 LTERDVTRLVAQRTADRALGELASRPLVTCRADDSLYRVRMLLAERHIRHIG--VLDGEG 262 Query: 529 EVERLLG---------------INMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDM 573 E+ L+ ++ + A ++ ++S E V+ D Sbjct: 263 ELVDLVSFKDILSGMELAYVHELHDALRARDLALSASQRDLYLAEKVIESSLEGVMVTDA 322 Query: 574 AMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVV 633 +I +NP +M+G+ EE +G+ + + + ++ + +V Sbjct: 323 HARILSVNPAFTRMTGYAPEEVVGLNPSVL--NSGRQSPAFYARMWDGLLGDGQWQGEVW 380 Query: 634 LHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANR 693 ++G Y IT + +G + D++ ++ ++ A +D LT L NR Sbjct: 381 NRRKTGEVYPQLLHITAIRDREGVLTHYAALFTDISRLKETEARIRDLAYYDPLTGLPNR 440 Query: 694 ASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRS 753 + +L++ L R A++F+DLDRFK +NDS GHA GD LL E+A+ + + LR Sbjct: 441 RLLDDRLQVELAHAARLRCRLAVMFVDLDRFKRINDSLGHAVGDKLLVEIAARLRASLRD 500 Query: 754 SDVLARLGGDEFGLLLPDCN-VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLID 812 D +AR+GGDEF ++L + + + A +A R+++ + EGR V S G+ + Sbjct: 501 DDTVARMGGDEFLVVLNNLSGPDEAATMARRMVAELRR-PVNVEGRELVVTTSVGVAVYP 559 Query: 813 DNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLM 872 D++ A ++ AD+A Y +K+ GR ++EP A ER A+ R + ++L Sbjct: 560 DDSRDADTLVKHADVAMYRAKDEGRNSFQLFEPAMNARSLERLALETAL-HRALPRDELQ 618 Query: 873 MLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFF 931 + V + + + +L W + ++ F D L + V Sbjct: 619 LYFQPVM--KAEGGELVAVEALLRWRHPDLGLVSPADFIPLAEDTGLIVPIGEWVLRSAC 676 Query: 932 QQAAKA--VASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH 989 + + + + + +S + L + + P L L + ++D Sbjct: 677 EHHRRWCEAGGAPLHMMVNISARQFREEGFAAMVGSVLAETGMTPGDLTLELTESMLMDD 736 Query: 990 AE----SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEML 1045 + + LR G + + G LK D L +D + N D L Sbjct: 737 TDRALARLDHLRALGVCLAIDDFGTGYSSLAYLKRFPIDELKIDRLFVRGIDRNTRDAAL 796 Query: 1046 ITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNS 1099 ++ I LG++ +A V +D L G DL G + P + V + Sbjct: 797 VSAIVSLGHSLGLRVVAEGVETAAHLDVLRRQGCDLAQGFHFSPPLPWEEFVKA 850 Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats. Identities = 41/268 (15%), Positives = 84/268 (31%), Gaps = 6/268 (2%) Query: 274 LLILLPANIMTMVMYAFRAERKHISESETHF---RNAMEYSAIGMALVGTEGQWLQTNKA 330 +L + + + A RA +S S+ +E S G+ + + L N A Sbjct: 273 ILSGMELAYVHELHDALRARDLALSASQRDLYLAEKVIESSLEGVMVTDAHARILSVNPA 332 Query: 331 LCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWA 390 + GY+ EE+ GL L ++ + G+ + E + G+V Sbjct: 333 FTRMTGYAPEEVVGLNPSVLNSGRQSPAFYARMWDGLLGDGQ-WQGEVWNRRKTGEVYPQ 391 Query: 391 LLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPN 450 LL ++ +R +G ++ A DI+ LK TE + L L + + Sbjct: 392 LLHITAIRDREGVLTHYAALFTDISRLKETEARIRDLAYYDPLTGLPNRRLL--DDRLQV 449 Query: 451 IFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVK 510 + R+ + ++ + + I L++ Sbjct: 450 ELAHAARLRCRLAVMFVDLDRFKRINDSLGHAVGDKLLVEIAARLRASLRDDDTVARMGG 509 Query: 511 DGIRHIRALANRVLNKEGEVERLLGINM 538 D + + R++ Sbjct: 510 DEFLVVLNNLSGPDEAATMARRMVAELR 537 >UniRef50_A1JKY3 Putative inner membrane protein n=11 Tax=Enterobacteriaceae RepID=A1JKY3_YERE8 Length = 1134 Score = 833 bits (2152), Expect = 0.0, Method: Composition-based stats. Identities = 485/1101 (44%), Positives = 710/1101 (64%), Gaps = 11/1101 (0%) Query: 16 LLHLVSLGLVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRHAGRMWPGIALSCSLG 75 LLH+ + +V F+ LF + LS+ LAPLWFPT+++MVA + H R W L+ + Sbjct: 34 LLHITIISIVVFLLALFCIRLSEQSENLAPLWFPTAVLMVALFHHPMRYWSWQLLAAGIS 93 Query: 76 NIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQNLADWLRLALGSAIVP 135 IAA+ +L+ S + T IN+ EA GA LLRK L +PL NL WL+ ++ + I+ Sbjct: 94 IIAANFILYGISGFPLPLTLINLTEAAAGAWLLRKFLQPKDPLNNLFSWLKFSVCTVILV 153 Query: 136 PLLGGVLVVLLTPGDD--PLRAFLIWVLSESIGALALVPLGLLFKPHYLLRHRNPRLLFE 193 PLL G+ + + +W +SE+IG LAL P+GLL++ Y + LF+ Sbjct: 154 PLLSGLAAAWYLAPQNGSFTQVLTVWFMSEAIGMLALGPVGLLYRRGYFNITNKTKALFD 213 Query: 194 SLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAAD 253 + + ++L+ ++ ++YLP+PFTFII+ L+W+++RLPR E F I +++++M+ + Sbjct: 214 MIWMMIVSLSACYIGLMYLPFPFTFIIMALIWTSIRLPRFETFTICFLATLLIAMMINFN 273 Query: 254 PSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAI 313 L + ++P L++L+P + M MVM+AFR E++HI ESE FRNAMEYSAI Sbjct: 274 LFTLQVDTKLSVQAFSFIPLLMVLIPPHAMAMVMHAFRMEKEHIVESENRFRNAMEYSAI 333 Query: 314 GMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINT 373 GMALV EG+W+Q N+ALC+ LGY QE L LTFQQ+T PEDL+ DL+ ++ L G I + Sbjct: 334 GMALVSPEGKWMQVNQALCKLLGYRQETLLTLTFQQITHPEDLSADLKLLDDLYHGHIPS 393 Query: 374 YSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITL 433 YSMEKRY +G+VVWALL VS+VR PLY+I+Q+EDIN+LK++E VN++LMERITL Sbjct: 394 YSMEKRYIRSDGEVVWALLVVSVVRDHAQQPLYYISQVEDINDLKKSEIVNRRLMERITL 453 Query: 434 ANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRD 493 ANEAGGIGIWE +++ + SWDKRM+ELY IP + + VW + + PED ++ Sbjct: 454 ANEAGGIGIWELDIRKQLISWDKRMYELYHIPFNTPVDETVWQQYIHPEDINRVKREYSA 513 Query: 494 SLQSRSPFKLEFRITVKDG-IRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQ 552 +L R P++L+FR+ + +G I H+R AN + +K G + RL+G +DMTE++ L EAL + Sbjct: 514 ALTQRQPYRLDFRLLLPNGDIVHLRNQANMICDKNGNILRLIGTTLDMTEIRNLTEALHE 573 Query: 553 EKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNG 612 EKERLHITLDSIGEAVVC D MKITFMNPVAEKM+GW ALG P+ ++ +T G +G Sbjct: 574 EKERLHITLDSIGEAVVCTDQEMKITFMNPVAEKMTGWANTIALGQPIQHIIKLTNGVDG 633 Query: 613 PLMENIYSADTSRSAIE---QDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVT 669 P ++N + + +VLH R G YD+ S+ PL TL+G+ +G+VLV QDV Sbjct: 634 PEIDNPIEHCLTHRPYSSLNESIVLHHRDGQYYDIQESVAPLKTLEGTVVGAVLVFQDVG 693 Query: 670 ESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVND 729 ESR M+R+LS+SASHD LT L NRA+FE +L+ +Q Q+HAL F+DLD FKAVND Sbjct: 694 ESRAMMRKLSHSASHDNLTGLPNRANFENKLKAAIQKSIDFDQQHALAFLDLDYFKAVND 753 Query: 730 SAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVN 789 +AGH AGDALL+EL+ LM LR+SD +ARLGGDEFGLL+ +C + A+ I ++S +N Sbjct: 754 TAGHPAGDALLKELSQLMRQHLRNSDCVARLGGDEFGLLMLNCTLPHAKAITQSLVSMIN 813 Query: 790 DYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQ-A 848 YHF WE +++R+GASAG+T I +N Q +E+M+QADIACY +K+ GRG+V +Y+P+Q Sbjct: 814 GYHFYWEDKLYRIGASAGVTQISSSNSQRSEIMAQADIACYTAKHSGRGQVYLYQPRQKQ 873 Query: 849 AAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQT 908 + +S +E ++ ENQL++ A P+ P + + +SL++ + ++ + Sbjct: 874 LLARQHELLSREEVESILSENQLLLQVTPTAPPKTPLSVCFYQVSLEIDRPQSPLVSQSA 933 Query: 909 FRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLE 968 F + + L +D + + A+A+ KG+++++PLS A L LL ++ Sbjct: 934 FEEAATLYNLLPKVDSWICEQLLVDHAQAIHQKGLALAIPLSEAALLKEDFRQSLLTLVQ 993 Query: 969 NSPLPPRLLHLIIPAEAILDHA----ESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMAD 1024 + LPP+ L+ +I +L + + KL+ GC++++ + G +L F L + D Sbjct: 994 QTLLPPQSLYWMIDESTLLQYPFAIGNFLAKLQQPGCKLIVKEFGHNLNDFELLAEHHID 1053 Query: 1025 YLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYG 1084 YL + EL A++ N MDE+LI+II G AQR + T+AGPV LP + L IGVDL G Sbjct: 1054 YLKFNSELIAHIHINQMDEVLISIINGTAQRANIATLAGPVELPPTLSKLIDIGVDLADG 1113 Query: 1085 EVIADAQPLDLLVNSSYFAIN 1105 +I +PL ++NSSYFAI Sbjct: 1114 TMIGRTEPLSEVLNSSYFAIK 1134 >UniRef50_C5V0K3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0K3_9PROT Length = 1561 Score = 832 bits (2150), Expect = 0.0, Method: Composition-based stats. Identities = 152/806 (18%), Positives = 293/806 (36%), Gaps = 34/806 (4%) Query: 304 FRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWP--EDLNKDLQ 361 N + + L+ E + + NK G+S L G + L P + L Sbjct: 768 LENLQNSTGFSLILLDQELRLQRYNKEAASLFGFSVHTL-GKSIPGLAVPVIDVLETAKL 826 Query: 362 QVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTE 421 + I + G L D T I D EL + Sbjct: 827 AMSDGIKRQKQMSFG--------GKHYNVL--CFPYTSQDQTLGGVIVTFIDQTELMEAQ 876 Query: 422 QVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLP 481 Q +R+T + + I + + ++ + P + P Sbjct: 877 QEILSSKDRLTGVMQNSPMLISIKDPAGRYQFVNNAFESIFALTPGSAIGNTD--TQIFP 934 Query: 482 EDRQ-HAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDM 540 E EK+ D L ++ + E RI + D + + + +++G V + + + Sbjct: 935 ESIAVLFEKLHFDVLHKKNRVEAEERILIGDQQHWLSFICYPINDEKGSVGAVCSQVIIV 994 Query: 541 TEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPL 600 T + L ++K+ D+ E ++ D I +N +M+G+ + + +G Sbjct: 995 TARR----ELDEQKKLTTKFFDAASEGLMITDSHQNIIKVNHAFVRMTGYDEADVIGKNP 1050 Query: 601 LTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIG 660 + + ++ + ++ + G Y +I L G Sbjct: 1051 SLL--SSGKHEDTFYSAMWQEINQHGWWQGELWNRRKDGTHYLEWLTIHTLRDEHGHLTN 1108 Query: 661 SVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFID 720 + + D+T + R+L Y +HD LT L NR ++ AL+FID Sbjct: 1109 YIAIFSDITLIKAAQRRLEYMVAHDELTSLPNRNELRGRMAQTFARAQRHGGTFALMFID 1168 Query: 721 LDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFI 780 LD FK VND+ GH GD LL+++A + +R+ D +AR+GGDEF +LL D + Sbjct: 1169 LDNFKNVNDNLGHDYGDVLLQQVAERLGLCVRTEDTVARIGGDEFNVLLDDVSETQIANT 1228 Query: 781 ATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRV 840 A RI+ V+ ++ + + V AS GI + + + AD A Y +K+ G+ Sbjct: 1229 AQRILDHVSK-PYLIKEQQVFVSASIGIAVYPKDAEDIETLTKNADSAMYQAKDKGKDSY 1287 Query: 841 TVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCE 900 + + R + + + I N+L ++ + + + +L W Sbjct: 1288 QFFTSDLKEKINHRIEI-GNALHKAIDANELKLVYQPEFNLQ--TGELIGAEALLRWHSS 1344 Query: 901 G-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK---GISISLPLSVAGLSS 956 I+ F + L L V + +Q + ++ + ++ L+ Sbjct: 1345 LFGIVGPDEFIPIAEESDLILELGEWVIEQAARQLNLWRKADTPLPGTLFVNVAPRQLAR 1404 Query: 957 ATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQ-KLRLA---GCRIVLSQVGRDL 1012 L+ + QL+ LP L + I +++ +E + KL I + G Sbjct: 1405 QPLLAIITRQLQKHRLPSGSLGIEITERTLVNSSEDISVKLHKIELEEIPIAIDDFGTGY 1464 Query: 1013 QIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMD 1072 + LK+ +L + + + + D+ + T I G + L ++TIA + + Sbjct: 1465 SSLSYLKSFPISFLKIPNQFIDGITTDESDKGIATAIHGVSVALKLQTIAEGIETEDQLI 1524 Query: 1073 TLSGIGVDLIYGEVIADAQPLDLLVN 1098 L +G G ++ + V Sbjct: 1525 MLREMGCQSGQGYLLGRPVDPNQFVE 1550 Score = 136 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 30/279 (10%), Positives = 90/279 (32%), Gaps = 16/279 (5%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 R+ + E + + ++ G+ + + ++ N A + GY + ++ G L+ Sbjct: 995 TARRELDEQKKLTTKFFDAASEGLMITDSHQNIIKVNHAFVRMTGYDEADVIGKNPSLLS 1054 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 + + + + I + + E ++G L + +R G +IA Sbjct: 1055 SGKHEDTFYSAMWQEI-NQHGWWQGELWNRRKDGTHYLEWLTIHTLRDEHGHLTNYIAIF 1113 Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPN 471 DI +K ++ + ++ L + + F+ +R + + N Sbjct: 1114 SDITLIKAAQRRLEYMVAHDELTSLPNRNEL--RGRMAQTFARAQRHGGTFALMFIDLDN 1171 Query: 472 WQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVE 531 ++ + + + + + + L + +D + I VL + Sbjct: 1172 FKNVNDNLGHDYGDVLLQQVAERLG--------LCVRTEDTVARIGGDEFNVLLDDVSET 1223 Query: 532 RLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVC 570 ++ + + + +++ S + Sbjct: 1224 QIANTAQRILDHVSKPYLIKEQQ-----VFVSASIGIAV 1257 Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 81/268 (30%), Gaps = 12/268 (4%) Query: 286 VMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGL 345 ++ I S+ M+ S + +++ G++ N A + G Sbjct: 868 DQTELMEAQQEILSSKDRLTGVMQNSPMLISIKDPAGRYQFVNNAFESIFALTPGSAIGN 927 Query: 346 TFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPL 405 T Q+ PE + +++ + + N E+R + W + G+ Sbjct: 928 TDTQIF-PESIAVLFEKLHFDVLHKKNRVEAEERILIGD-QQHWLSFICYPINDEKGSVG 985 Query: 406 YFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIP 465 +Q+ + + + + T +A G+ + NI + + Sbjct: 986 AVCSQVIIVTARR----ELDEQKKLTTKFFDAASEGLMITDSHQNIIKVNHAFVRMTGYD 1041 Query: 466 PHIKPNWQV--WYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRA-LANR 522 + + + ++ E KDG ++ + Sbjct: 1042 EADVIGKNPSLLSSGKHED---TFYSAMWQEINQHGWWQGELWNRRKDGTHYLEWLTIHT 1098 Query: 523 VLNKEGEVERLLGINMDMTEVKQLNEAL 550 + ++ G + + I D+T +K L Sbjct: 1099 LRDEHGHLTNYIAIFSDITLIKAAQRRL 1126 >UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZT1_9PROT Length = 1301 Score = 831 bits (2148), Expect = 0.0, Method: Composition-based stats. Identities = 117/558 (20%), Positives = 222/558 (39%), Gaps = 13/558 (2%) Query: 546 LNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLH 605 +L ++ ++V D+ I + N K +G+T E +G + Sbjct: 739 ERAQTGAWLNKLSQAVEQSPNSIVITDLNANIEYANDAFVKTTGYTLPEVMGKNPRILH- 797 Query: 606 ITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVI 665 + +++ S +++ + G Y I+PL DG + + Sbjct: 798 -SGKTTVETYAAMWTQLNSGQMWRGELINRRKDGTEYVELARISPLRHTDGRVTNYLSIK 856 Query: 666 QDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFK 725 +D+TE +++ ++ A D LT L N+ + + +Q + A++F+D+D FK Sbjct: 857 EDITEQKQVEARIRQLAHFDLLTGLPNQTLLKDRAGFAMQMAQRSAHHLAVLFLDIDHFK 916 Query: 726 AVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRII 785 +ND+ GH GD LL LA M +LR D L+R GGDEF L+LPD + + A +A +I+ Sbjct: 917 NINDTLGHRIGDELLVHLAKRMKLLLRDEDTLSRFGGDEFILVLPDTDADGAAHVAEKIL 976 Query: 786 SAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEP 845 V + E V S GI + + ++ AD+A Y +K GR + Sbjct: 977 ETVAKTCY-IEQHELVVTPSIGIAMYPSDGMDFDKLYQSADVAMYRAKQDGRNNFRFFTS 1035 Query: 846 QQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEII 904 + A + R + + + + NQ + S + + + + +L W E I Sbjct: 1036 EMQARSARRLLLENALR-QALSRNQFELHYQPQISMQ--DGKIVGAEALLRWYHPELGSI 1092 Query: 905 DEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV--ASKGISISLPLSVAGLSSATLVND 962 F + L ++ V QQ + +++++ LS A L Sbjct: 1093 SPAEFIPVAEESGLILSIGEWVLRTAVQQVKRWQDAGHPPVTVAINLSAVQFRQARLSEL 1152 Query: 963 LLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRLAGCRIVLSQVGRDLQIFNSL 1018 +++ L + L P + L + +D+ + L G R+ + G + L Sbjct: 1153 VMQILHEANLAPHWIELELTESVAMDNPLVAIGVMNDLHGCGIRMSIDDFGTGYSSLSYL 1212 Query: 1019 KANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIG 1078 + + L +D ++ ++ ++T I A +G +TIA V + L G Sbjct: 1213 RKFKVNKLKIDQSFVRDLADDIESRAIVTAIITLASSMGFQTIAEGVETAGQLAFLRLQG 1272 Query: 1079 VDLIYGEVIADAQPLDLL 1096 + + G + + L Sbjct: 1273 CNEVQGYYFSRPLTVALF 1290 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 78/251 (31%), Gaps = 7/251 (2%) Query: 278 LPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGY 337 L A + + ER A+E S + + N A + GY Sbjct: 724 LAALERGAHLASLAIERAQTGAWLNKLSQAVEQSPNSIVITDLNANIEYANDAFVKTTGY 783 Query: 338 SQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLV 397 + E+ G + L + + + + + E ++G L +S + Sbjct: 784 TLPEVMGKNPRILHSGKTTVETYAAMWTQL-NSGQMWRGELINRRKDGTEYVELARISPL 842 Query: 398 RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKR 457 RHTDG +++ EDI E K+ E +QL L + + +R Sbjct: 843 RHTDGRVTNYLSIKEDITEQKQVEARIRQLAHFDLLTGLPNQTLL--KDRAGFAMQMAQR 900 Query: 458 MFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIR 517 + +++ + + + ++ + E ++ G I Sbjct: 901 SAHHLAVLFLDIDHFKNINDTLGHRIGDELLVHLAKRMKLL--LRDEDTLSRFGGDEFIL 958 Query: 518 ALANRVLNKEG 528 L + +G Sbjct: 959 VL--PDTDADG 967 Score = 116 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 29/239 (12%), Positives = 69/239 (28%), Gaps = 1/239 (0%) Query: 244 MMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAE-RKHISESET 302 M + + L+ L+ M L L+ + A +M + + +E+ Sbjct: 218 MAGLMQASRYRHLVVVDDAGLVLGMVTLHKLMARIAATVMNEETLRRQESLEHSMHHAES 277 Query: 303 HFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQ 362 R ++ + L EG +L N +F G + ++ G T E + Sbjct: 278 QLRLIVKTIPDLIWLKDVEGVYLSCNPMFERFFGAIEADIVGKTDYDFVSREQADFFRAH 337 Query: 363 VEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQ 422 + + + + E + +G S + + G + + DI E + Sbjct: 338 DRAAMLADKPSINEEWVTFADDGHRACLETTKSPMFNAVGQLIGVLGIAHDITERLAAAK 397 Query: 423 VNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLP 481 ++L + ++ + + + + P Sbjct: 398 KIERLTQLYNALSQCNQAIVHSSSEAELFAQICQDAVRFGGLKMAWVGVVDHDTGWIRP 456 Score = 97.8 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 74/214 (34%), Gaps = 27/214 (12%) Query: 517 RALANRVLNKEGEVERLLGINMDM-----------TEVKQL--NEALFQEKERLHITLDS 563 R V++ G V ++ ++ M T +Q ++ + +L + + + Sbjct: 226 RYRHLVVVDDAGLVLGMVTLHKLMARIAATVMNEETLRRQESLEHSMHHAESQLRLIVKT 285 Query: 564 IGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSA-- 621 I + + D+ NP+ E+ G + + +G + + A Sbjct: 286 IPDLIWLKDVEGVYLSCNPMFERFFGAIEADIVGKTDYDFVS---REQADFFRAHDRAAM 342 Query: 622 DTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYS 681 + +I ++ V G + + +P+ G IG + + D+TE +++ Sbjct: 343 LADKPSINEEWVTFADDGHRACLETTKSPMFNAVGQLIGVLGIAHDITERLAAAKKIER- 401 Query: 682 ASHDALTHLANRASFEKQLRILLQTVNSTHQRHA 715 LT L N Q + +S + A Sbjct: 402 -----LTQLYN---ALSQCNQAIVHSSSEAELFA 427 Score = 84.7 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 84/288 (29%), Gaps = 53/288 (18%) Query: 304 FRNAMEY-SAIGMAL-VGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQ 361 + +E +G+ G L N A + G S E+ ++ + + Sbjct: 165 YALVVENGLPLGILTERDMAG--LFVNGAPVE--GVSLREVMHSPVLTVSHQTPVFEMAG 220 Query: 362 QVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIA-----------Q 410 ++ RY + +V G L + Sbjct: 221 LMQAS------------RYRHL------------VVVDDAGLVLGMVTLHKLMARIAATV 256 Query: 411 IEDINELKRT--EQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHI 468 + + ++ E ++ L + IW +++ S + + Sbjct: 257 MNEETLRRQESLEHSMHHAESQLRLIVKTIPDLIWLKDVEGVYLSCNPMFERFFGAIEAD 316 Query: 469 KPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRIT-VKDGIR-HIRALANRVLNK 526 + + V E R ++ + P E +T DG R + + + N Sbjct: 317 IVGKTDY-DFVSREQADFFRAHDRAAMLADKPSINEEWVTFADDGHRACLETTKSPMFNA 375 Query: 527 EGEVERLLGINMDMTEVKQLNEALFQEKERL-------HITLDSIGEA 567 G++ +LGI D+TE + + + + + S EA Sbjct: 376 VGQLIGVLGIAHDITERLAAAKKIERLTQLYNALSQCNQAIVHSSSEA 423 Score = 58.5 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 42/125 (33%), Gaps = 2/125 (1%) Query: 429 ERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAE 488 +++ A E I +L NI + + + Sbjct: 748 NKLSQAVEQSPNSIVITDLNANIEYANDAFVKTTGYTLPEVMGKNPRILHSGKTTVETYA 807 Query: 489 KVIRDSLQSRSPFKLEFRITVKDGIRHIR-ALANRVLNKEGEVERLLGINMDMTEVKQLN 547 + L S ++ E KDG ++ A + + + +G V L I D+TE KQ+ Sbjct: 808 AMWTQ-LNSGQMWRGELINRRKDGTEYVELARISPLRHTDGRVTNYLSIKEDITEQKQVE 866 Query: 548 EALFQ 552 + Q Sbjct: 867 ARIRQ 871 >UniRef50_Q0AAW8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAW8_ALHEH Length = 1051 Score = 831 bits (2147), Expect = 0.0, Method: Composition-based stats. Identities = 165/903 (18%), Positives = 309/903 (34%), Gaps = 81/903 (8%) Query: 262 TYLMSHMPWLPFLLILLPANIMTMVMYAFRAE---RKHISESETHFRNAMEYSAIGMALV 318 T L+ + +++ ++ + R E + ++ E + E S + + Sbjct: 144 TGLLLVVAAGTGIILWWRGHVHGLEARRLRTELMAQADLAARERAYETLAENSPDIIVRL 203 Query: 319 GTEGQWLQTNKALCQFLGYSQEELRGLTFQQL-TWPEDLNKDLQQVEKLISGEINTYSME 377 + + L N+AL F G +E G T +++ + L + + + + +M Sbjct: 204 DRDLRHLYVNRALEAFTGIPREHYLGRTHEEVGFRGKLLATWERHLNQALES-GEPGTMT 262 Query: 378 KRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEA 437 + +R G V + G + + D+ + + +L + ++A Sbjct: 263 FSHPDREGRVRHFEALIVPETDDTGNIAHVLCISHDVTGHVQAREEISRLRDLYAALSQA 322 Query: 438 GGIGIWEWELK---PNIFSWDKRMFEL--------------------YEIPPHIKPNWQV 474 + I + K R L ++ Sbjct: 323 NQVIIRIDDPKELFQRTCEVVVRYGRLDMAWIGLVDQASGRVTPVSRAGRDMGYLDEIRI 382 Query: 475 WYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANR------------ 522 + PE R + IR R + + D A A R Sbjct: 383 STDPARPESRGPVGRAIRQ----RRASVFDRFLDHPDAGPWQAAAARRGFRSVAAFPLFQ 438 Query: 523 ---------------------VLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITL 561 ++ E+ L +D E +Q +A ++ Sbjct: 439 SDDCIGALAVYSSEERFFSADIIQLMAEMTGDLSFALDNIEREQARKAAEEQMRLAEEVF 498 Query: 562 DSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSA 621 + EA++ D +I +N + +G+ +E LG + I + Sbjct: 499 EHSTEAIIITDARQRIMRVNRAFTERTGYVPDEVLGRRPHMLRSPH--HTQQFYRRILAR 556 Query: 622 DTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYS 681 E ++ + G + + +++ + G + V D+TE++ + Y Sbjct: 557 LRRHGFWEGEIWNRRKGGENAPLWLTLSVVRDEAGRITHYIAVGLDLTETKDREAHIRYL 616 Query: 682 ASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLR 741 A HD +T L NR +L L+ H R AL+ +DLDRFK +N++ GH AGD +L+ Sbjct: 617 AQHDPVTGLPNRGLLADRLGQALRRAQDQHYRLALLSLDLDRFKIINETLGHVAGDEVLQ 676 Query: 742 ELASLMLSMLRSSDVLARLGGDEFGLLLPDCN-VESARFIATRIISAVNDYHFIWEGRVH 800 +A + + + ++R+G D+F +LLP+ + A A R+++ V + G+ Sbjct: 677 TVAQRLQDHVNGAGTVSRIGSDQFLILLPEIHKPTEAAQAAERLMACVAE-PLDLSGQEL 735 Query: 801 RVGASAGITLIDDNNHQAAEVMSQADIACYASKNG-GRGRVTVYEPQQAAAHSERAAMSL 859 + GI L ++ + S AD A +K G + + ER ++ Sbjct: 736 TPSSVVGIALYPEDGDNLETLHSHADAAMSMAKQASGHEGYRFFSSDMTSRARERLSLES 795 Query: 860 DEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSC-EGEIIDEQTFRRSFSDPAL 918 R + + + S + + + +L W + I F + L Sbjct: 796 -RLRRALDRGEFRLHYQPQVS--LADGTLTGMEALLRWHAGDEGDISPARFIPIAEETGL 852 Query: 919 SHALDRRVFHEFFQQAAKAV--ASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRL 976 L R V E +Q + +S+ LSV L + +V D+ LE S LP Sbjct: 853 IVPLGRWVLGEACRQNRAWRQAGLPALPVSVNLSVVQLRRSDVVADVRRALETSGLPGDG 912 Query: 977 LHLIIPAEAIL--DHAESV---QKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGE 1031 LHL + L D V Q LR G + + G LK L +D Sbjct: 913 LHLEVTESLFLSEDDPAVVTGFQTLREMGISLAIDDFGTGYSNLGYLKRLPIAKLKIDQS 972 Query: 1032 LCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQ 1091 + + D + I A+ LG+ IA V + L +G D I G + Sbjct: 973 FVRGIGDSGHDTAINQAIISIARSLGLGVIAEGVETAAELRVLQALGCDEIQGFYYSRPL 1032 Query: 1092 PLD 1094 + Sbjct: 1033 DAE 1035 >UniRef50_C6CDP3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dickeya dadantii Ech703 RepID=C6CDP3_DICDC Length = 685 Score = 830 bits (2146), Expect = 0.0, Method: Composition-based stats. Identities = 143/684 (20%), Positives = 260/684 (38%), Gaps = 23/684 (3%) Query: 425 QQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDR 484 + + +GI + N + + +Y + + PE + Sbjct: 6 WRSDSLFQAILDRCPVGIAVIDYSGNYLTVNPAYCNIYGYTQQEMLHRS-FTMVFPPEAQ 64 Query: 485 QHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVK 544 + + L E+ +T +DG + + G L +D++E K Sbjct: 65 GSVLERHQRFLDEGGKLGGEWTVTRRDGTLLTVWSESVPFAQAGHKADRLVYVLDISERK 124 Query: 545 QLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVL 604 + ++++ D+ EA+ D I +NP +++G+ ++ G Sbjct: 125 KT----HEQQQIAAAVYDASHEAIFVTDADNNIISVNPAFSRLTGYHFDDVNGKNPRMFK 180 Query: 605 HITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLV 664 + ++ A + +V ++G Y ++T + G I V + Sbjct: 181 --SSRHPPSFYAEMWHALHEKGLWIGEVWDRHKNGHDYLKELTVTVIRDAAGHIINHVGM 238 Query: 665 IQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRF 724 D+T +K + A++DA+T L NR F+ +L Q T AL+ IDLD F Sbjct: 239 FSDITLRKKQEELIWRQANYDAITDLPNRHLFQSKLEQAAQHARRTGNLMALMLIDLDHF 298 Query: 725 KAVNDSAGHAAGDALLRELASLMLSMLRSSDV-LARLGGDEFGLLLPDC-NVESARFIAT 782 KAVNDS GH AGD LL ++ ++ ++ +D +ARLGGDEF +++ D +A Sbjct: 299 KAVNDSMGHRAGDMLLTRVSQRLIDSVQHADTIIARLGGDEFAVIISDLFQPHDCDALAK 358 Query: 783 RIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTV 842 ++ ++ + F +G V AS GI ++ + AD A YA+KN GR + Sbjct: 359 ALLENLS-HPFNIDGENMFVSASIGIACFPTDSDNLEALFKNADQAMYAAKNAGRNGFSY 417 Query: 843 YEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCE-G 901 Y P A R M+ D + + I+E Q + + + + +L W Sbjct: 418 YSPALHDAARTRLRMTNDLR-KAIREEQFEVYYQPIVA--LDTGHITKAEALVRWHHPTH 474 Query: 902 EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVA--SKGISISLPLSVAGLSSATL 959 ++ F + + L V + Q A+ +++ LS L S Sbjct: 475 GLVSPAEFIPLAEETGIIIPLGNWVARQAIAQLARWRQFCDPRFQMTINLSPIQLRSQDF 534 Query: 960 VND-LLEQLENSPLPPRLLHLIIPAEAILDHAESVQK----LRLAGCRIVLSQVGRDLQI 1014 + L +L+ L + + I +L+ V + R AG +I + G Sbjct: 535 ADMDWLRELDRHGLSGDAIAIEITEGLLLNAEPRVNRNLHMFRDAGIQIAIDDFGTGYSS 594 Query: 1015 FNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTL 1074 L+ DYL +D ++ + + L I A LG++ +A V L Sbjct: 595 LAYLRRFNIDYLKIDRSFIEDM--DGVGHELCVAIVAMAHSLGLQVVAEGVETLQQSAML 652 Query: 1075 SGIGVDLIYGEVIADAQPLDLLVN 1098 IG D G + + Q + Sbjct: 653 KRIGCDYAQGFLFSRPQSAADITQ 676 Score = 154 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 53/343 (15%), Positives = 119/343 (34%), Gaps = 37/343 (10%) Query: 299 ESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNK 358 S++ F+ ++ +G+A++ G +L N A C GY+Q+E+ +F + PE Sbjct: 7 RSDSLFQAILDRCPVGIAVIDYSGNYLTVNPAYCNIYGYTQQEMLHRSFTMVFPPEAQGS 66 Query: 359 DLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELK 418 L++ ++ + E E R+G ++ + + DI+E K Sbjct: 67 VLERHQRFL-DEGGKLGGEWTVTRRDGTLLTVWSESVPFAQAGHKADRLV-YVLDISERK 124 Query: 419 RTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIK--PNWQVWY 476 +T + Q +A I+ + NI S + L N +++ Sbjct: 125 KTHEQQQIAA----AVYDASHEAIFVTDADNNIISVNPAFSRLTGYHFDDVNGKNPRMFK 180 Query: 477 ECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHI-RALANRVLNKEGEVERLLG 535 P + +L + + E K+G ++ + + G + +G Sbjct: 181 SSRHP---PSFYAEMWHALHEKGLWIGEVWDRHKNGHDYLKELTVTVIRDAAGHIINHVG 237 Query: 536 INMDMTEVKQLNEALFQE-----------KERLHITLDSIGE---------AVVCIDMAM 575 + D+T K+ E ++++ + L+ + A++ ID+ Sbjct: 238 MFSDITLRKKQEELIWRQANYDAITDLPNRHLFQSKLEQAAQHARRTGNLMALMLIDLD- 296 Query: 576 KITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENI 618 +N G + L + L + ++ + Sbjct: 297 HFKAVNDS----MGHRAGDMLLTRVSQRLIDSVQHADTIIARL 335 Score = 127 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 29/220 (13%), Positives = 70/220 (31%), Gaps = 4/220 (1%) Query: 293 ERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTW 352 ERK E + + S + + + + N A + GY +++ G + Sbjct: 122 ERKKTHEQQQIAAAVYDASHEAIFVTDADNNIISVNPAFSRLTGYHFDDVNGKNPRMFKS 181 Query: 353 PEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIE 412 ++ + E + E ++NG L V+++R G + + Sbjct: 182 SRHPPSFYAEMWHALH-EKGLWIGEVWDRHKNGHDYLKELTVTVIRDAAGHIINHVGMFS 240 Query: 413 DINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNW 472 DI K+ E++ + + +++ +L+ +R L + ++ Sbjct: 241 DITLRKKQEELIWRQANYD-AITDLPNRHLFQSKLEQAAQHA-RRTGNLMALMLIDLDHF 298 Query: 473 QVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG 512 + + + + L S + I G Sbjct: 299 KAVNDSMGHRAGDMLLTRVSQRL-IDSVQHADTIIARLGG 337 >UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Nitrosococcus oceani RepID=Q3JAR2_NITOC Length = 944 Score = 830 bits (2145), Expect = 0.0, Method: Composition-based stats. Identities = 136/573 (23%), Positives = 238/573 (41%), Gaps = 14/573 (2%) Query: 534 LGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQE 593 G +D Q + +S E V+ D + +N ++G + Sbjct: 368 CGSILDAYHNDQRRKNAESRLRLTAKVFESTVEGVIITDTKAYVVDVNEAFTHITGIARS 427 Query: 594 EALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLST 653 E +G L T+ + + + A S + ++ ++G Y + + + Sbjct: 428 EIMGRHLSTLQTK--QEKPISFQRVRHAIKSTGQWQGELWSQRKNGEIYPLWVTANAVRN 485 Query: 654 LDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQR 713 V + D+T ++ ++L Y A HDALT L NR+ F +L + H R Sbjct: 486 SKEEITHFVAIFSDITLRKQTEQRLYYLAHHDALTGLPNRSLFLDRLEHAIHHAQRHHHR 545 Query: 714 HALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD-C 772 A++FIDLDRFK +ND+ GH GD LL+++A M +R+ D +ARLGGDEF +++ + Sbjct: 546 IAVLFIDLDRFKFINDTLGHPIGDILLKQVAERMRLNIRAEDTIARLGGDEFTVIIENFT 605 Query: 773 NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYAS 832 + + I +IISA + F +G V AS G++L ++ H+A+ ++ +AD A Y + Sbjct: 606 DTSAISLITQKIISA-CEKPFNIKGNELFVSASIGVSLYPEDGHEASMLLQRADAAMYQA 664 Query: 833 KNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLI 892 K G+ + + A +E+ A+ + R + + + + + + + Sbjct: 665 KKRGKSCCQFFTTEINTAATEQLAL-KNLLRRALARKEFQLYYQPIINME--SGAIVSVE 721 Query: 893 SLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK--GISISLPL 949 +L W E +I TF + L L V QA S + I++ L Sbjct: 722 ALIRWVDPELGLISPNTFIPLAEENGLILPLGEWVLQTACTQAKIWNQSNPYPVRIAINL 781 Query: 950 SVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVL 1005 S L + E L+ +P P L L + +++ E ++ L+ GCR+ L Sbjct: 782 SARQLEQTDFSERVSEILKKTPFPTDHLELELTESMLINRMESSLKTLNTLKKMGCRLSL 841 Query: 1006 SQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPV 1065 G LK D + +D + + D + T + A L IA V Sbjct: 842 DDFGTGYSPLAYLKRFPIDTVKIDRSFVQGISIDPDDAAITTAVTTMAHSLKRAVIAKGV 901 Query: 1066 VLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 ++ L+ I VD G I+ P + L Sbjct: 902 ETREQLNFLNEIKVDEAQGYFISYPVPAEELTQ 934 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 38/254 (14%), Positives = 79/254 (31%), Gaps = 4/254 (1%) Query: 270 WLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNK 329 + +L LL + Y RK+ E + G+ + T+ + N+ Sbjct: 357 LINYLNPLLSTCGSILDAYHNDQRRKNAESRLRLTAKVFESTVEGVIITDTKAYVVDVNE 416 Query: 330 ALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVW 389 A G ++ E+ G L ++ Q+V I + E +NG++ Sbjct: 417 AFTHITGIARSEIMGRHLSTLQTKQEKPISFQRVRHAIKS-TGQWQGELWSQRKNGEIYP 475 Query: 390 ALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKP 449 + + VR++ +F+A DI K+TEQ L L + Sbjct: 476 LWVTANAVRNSKEEITHFVAIFSDITLRKQTEQRLYYLAHHDALTGLPNRSLF--LDRLE 533 Query: 450 NIFSWDKRMFELYEIPPHIKPNWQVWYECV-LPEDRQHAEKVIRDSLQSRSPFKLEFRIT 508 + +R + ++ + + P ++V + R+ Sbjct: 534 HAIHHAQRHHHRIAVLFIDLDRFKFINDTLGHPIGDILLKQVAERMRLNIRAEDTIARLG 593 Query: 509 VKDGIRHIRALANR 522 + I + Sbjct: 594 GDEFTVIIENFTDT 607 Score = 64.7 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 55/142 (38%), Gaps = 5/142 (3%) Query: 414 INELKRTEQVNQQLMERITLA---NEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKP 470 I + +Q + R+ L E+ G+ + K + ++ + I Sbjct: 371 ILDAYHNDQRRKNAESRLRLTAKVFESTVEGVIITDTKAYVVDVNEAFTHITGIARSEIM 430 Query: 471 NWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRH-IRALANRVLNKEGE 529 + E + + + +R +++S ++ E K+G + + AN V N + E Sbjct: 431 GRHLSTLQTKQE-KPISFQRVRHAIKSTGQWQGELWSQRKNGEIYPLWVTANAVRNSKEE 489 Query: 530 VERLLGINMDMTEVKQLNEALF 551 + + I D+T KQ + L+ Sbjct: 490 ITHFVAIFSDITLRKQTEQRLY 511 >UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JY96_DESAC Length = 904 Score = 830 bits (2145), Expect = 0.0, Method: Composition-based stats. Identities = 137/670 (20%), Positives = 257/670 (38%), Gaps = 27/670 (4%) Query: 449 PNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRIT 508 N + + + +L E + RQ V +L S + FR Sbjct: 246 DNRLTINNQTSDLLATQKLSGDLLTQLNESL----RQGILSVFFATLISAGGVIIIFRYL 301 Query: 509 VKDGIRHIRALAN-------RVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITL 561 + + + + K V + + ++ + ++ Sbjct: 302 TQRSLNTVLQMTEAAFRNTEPARYKPTLVSEFNILGHSIVDLDHQRKESEKQLLLSSSVF 361 Query: 562 DSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSA 621 D+ E +V ++ I +NP E MSG+ +E +G + N + ++ + Sbjct: 362 DNAVEGIVITNLDGIIEQVNPACEAMSGYRLKELIGENPRIFR--SDHHNSAFYQQMWQS 419 Query: 622 DTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYS 681 E +V ++G Y ++ SI+ + G V + D++E ++ +L + Sbjct: 420 LIEEGRWEGEVWNRRKNGEVYPLNVSISRCTNSAGIPSHYVAIFHDISEIKRSEEKLQHQ 479 Query: 682 ASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLR 741 A HDALT+L NR F +L + + + A++++D+D FK +NDS GH GD LL+ Sbjct: 480 AYHDALTNLPNRKLFHDRLSVAVAHARQHKTKLAVIYLDIDNFKYINDSLGHHYGDKLLQ 539 Query: 742 ELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVH 800 +++ +LS R D ARLGGDEF +L+P+ + + RI+ + + GR + Sbjct: 540 QISERLLSCTRQEDTTARLGGDEFIILMPEIEDPHDITVLCRRILKQL-ELPHALSGRDY 598 Query: 801 RVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLD 860 V S G+T+ D+ +++ ADIA Y +K G+ ++ +R + Sbjct: 599 TVNVSMGVTVFPDDADTPEDLIKNADIAMYRAKEAGKNGYQLFTAAMQQTIMQRIELEA- 657 Query: 861 EQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWS-CEGEIIDEQTFRRSFSDPALS 919 + N+ ++ + + +L W +G+++ F + L Sbjct: 658 RLSDALCRNEFVLFYQPQVD--LESEHVIGAEALIRWQKPDGQLVYPDEFIPIAEECGLI 715 Query: 920 HALDRRVFHEFFQQAAKAVAS--KGISISLPLSVAGL-SSATLVNDLLEQLENSPLPPRL 976 +D V +QA K + +S+ LS LV + L + LP Sbjct: 716 TQIDHWVLKAACRQANKWREQSGRNFKMSVNLSSEQFAKDQELVQRVKNVLNKTGLPAEC 775 Query: 977 LHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGEL 1032 L L + A++ ES + +L G I + G + +K A YL +D Sbjct: 776 LTLEVTENAVMSDTESAIAIMTQLTALGVSIAIDDFGTGYSSLSYVKNFPARYLKIDRSF 835 Query: 1033 CANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQP 1092 ++ G+ D + I + L M+ IA V +D L + G Sbjct: 836 VKDIPGDSDDMAIAASIISLGRNLNMEVIAEGVEEQTQIDFLKQHRCQQVQGYFYGKPC- 894 Query: 1093 LDLLVNSSYF 1102 + +F Sbjct: 895 AAEFFSQQFF 904 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 47/298 (15%), Positives = 102/298 (34%), Gaps = 5/298 (1%) Query: 230 LPRMEAFLIFLTTVMMV--SLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVM 287 L A LI V+++ L + ++L + P ++ NI+ + Sbjct: 281 LSVFFATLISAGGVIIIFRYLTQRSLNTVLQMTEAAFRNTEPARYKPTLVSEFNILGHSI 340 Query: 288 YAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTF 347 +RK + + + + G+ + +G Q N A GY +EL G Sbjct: 341 VDLDHQRKESEKQLLLSSSVFDNAVEGIVITNLDGIIEQVNPACEAMSGYRLKELIGENP 400 Query: 348 QQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYF 407 + + QQ+ + + E + E +NG+V +++S ++ G P ++ Sbjct: 401 RIFRSDHHNSAFYQQMWQSLIEE-GRWEGEVWNRRKNGEVYPLNVSISRCTNSAGIPSHY 459 Query: 408 IAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPH 467 +A DI+E+KR+E+ Q L N + + ++ + Sbjct: 460 VAIFHDISEIKRSEEKLQHQAYHDALTNLPNRKLFH--DRLSVAVAHARQHKTKLAVIYL 517 Query: 468 IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLN 525 N++ + + + I + L S + + D + + Sbjct: 518 DIDNFKYINDSLGHHYGDKLLQQISERLLSCTRQEDTTARLGGDEFIILMPEIEDPHD 575 >UniRef50_B2UHK4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Ralstonia RepID=B2UHK4_RALPJ Length = 1183 Score = 829 bits (2143), Expect = 0.0, Method: Composition-based stats. Identities = 182/1035 (17%), Positives = 363/1035 (35%), Gaps = 62/1035 (5%) Query: 109 RKLLPWYNPLQNLADWLRLALGSAIVPPLLGGVLVVLLTPGDDPLRAFLIWVLSESIGAL 168 L+ N +A + L+ + + + A + + Sbjct: 156 AVLISARPMAGNDGTIRGVAYAAVRQSALIAAAVDGMSEAPVYLVDAAGNVLSTHGALEA 215 Query: 169 ALVPLGLLFKPHYLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAV 228 A VP + P + P T + + + + + I+ + + + Sbjct: 216 AQVPAIVRG-PLVAAAAQQPGEPVFVDDTDGVRRAYAAMVVPHAAGGHLRIVRGVDATDI 274 Query: 229 RLPRMEAFLIFLTTV------------MMVSLMMAADPSLLATPRTYLMSHMPWLPFLLI 276 + L + M + M+ L + + Sbjct: 275 VRQQRNVTLAGGGAILLMVVMLLALIQMALRRMVMPRIDALVDAARHYATGDFSARVPEH 334 Query: 277 LLPANIMTMVMYAFRAERKHISESE-------THFRNAMEYSAIGMALVGTEGQWLQTNK 329 + ++++ F R I + F+ + + N Sbjct: 335 GSSRDELSLLERTFNEMRAAIQRHDATVHRLTERFQRVARATNDWIFDWDIATGESWANA 394 Query: 330 ALCQFLGYSQEELR--------------GLTFQQLTWPEDLNKDLQQVEKLISGEINTYS 375 +L + LG + L LTFQQ P+D++ ++ +++ + +++ Sbjct: 395 SLHRLLG--SDALLGQGDDDGTGGGTSRTLTFQQFVHPDDVDAFAHELRTVLNSDRDSWQ 452 Query: 376 MEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLAN 435 R + N + SL R DG + + + DI++ EQ + + +A Sbjct: 453 HVCRVIDANRATRTVEIRASLYRDQDGRAVRMVGGVTDISQRSAIEQELRSSEANLRVAE 512 Query: 436 EAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSL 495 + +G W W++ + +W M+ L +PP P + + + + ++ Sbjct: 513 QIALLGSWRWDVLRDSTTWSSGMYVLTGMPPGAPPAFAQQAQFFTADSYNRLREAASRAV 572 Query: 496 QSRSPFKLEFR-ITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEK 554 + LE I R + + N N EV L G D+T+ ++ +E L Sbjct: 573 TEGEAYSLELEMIRRDGEHRWVLSRGNIERNDRDEVVALFGTMQDITDRRESDEQL---- 628 Query: 555 ERLHITLDSIGEAVVCIDM---AMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDN 611 L ++S+ + D I ++NP E+M+G+ EE LG + G Sbjct: 629 RLLRRVVESVPSGITVADAQQPDFPIVYVNPGFERMTGYRAEEILGRNARFLHSSEPGQP 688 Query: 612 GPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTES 671 + + +A S I + + G ++ ++ ++P+ G+ V + DVTE Sbjct: 689 A--LNEVRTALRDESEIRVLLRNFRKDGHAFLNNFLLSPVRDAKGAVTHYVGIQDDVTEQ 746 Query: 672 RKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSA 731 +L+ A+ D+LT L NR +++ ++ R + +++DRFK VNDS Sbjct: 747 EMTRTRLAQHATIDSLTGLPNRTLLADRVQQSVEMAARQRSRFYVALVNIDRFKVVNDSL 806 Query: 732 GHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDY 791 GH GD +LR +A + + D +AR GGD F L++ F + Sbjct: 807 GHLLGDEVLRRVAERLRDAADTVDTVARFGGDVFALVISHAGSRGVDFGFD-----LFAE 861 Query: 792 HFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAH 851 EG V AS G+ + A ++ A++A Y +K GR R+ + P+ Sbjct: 862 PVRVEGHEVFVTASIGVAEYPAHGADADSLIRHAEMAMYYAKQNGRNRLEFFAPEMDIGV 921 Query: 852 SERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFR 910 S R + + +++ Q +L R L +L W ++ F Sbjct: 922 SYRLNLEHQIRAT-LEQGQFRLLYQPQID--TKTGRVCGLEALIRWIHPTRGLLPPAAFI 978 Query: 911 RSFSDPALSHALDRRVFHEFFQQAAKAVASK---GISISLPLSVAGLSSATLVNDLLEQL 967 + L + V E +Q A+ +++++ +S T++ LL+ Sbjct: 979 PVAEESGLIVEIGNWVLTEAARQRAEWHKRGLADDLTLAVNVSPLQFKRGTVLPTLLKLQ 1038 Query: 968 ENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMA 1023 L L L + +++ E + +R G RI + G LK Sbjct: 1039 RQYGLGSGFLELEVTESMLMEGTERTIEDLTAIRQLGVRIAIDDFGTGYSSLAYLKRLPI 1098 Query: 1024 DYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIY 1083 D + +D ++ + D + T + A LG+K A V L+ D++ Sbjct: 1099 DLIKIDRAFVKDIDRDSNDAAICTTVVVLAHNLGVKVCAEGVEDAAQSAFLASHQCDVLQ 1158 Query: 1084 GEVIADAQPLDLLVN 1098 G ++ + + Sbjct: 1159 GYYFSEPLLPEAVTA 1173 >UniRef50_Q2BR92 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BR92_9GAMM Length = 944 Score = 829 bits (2142), Expect = 0.0, Method: Composition-based stats. Identities = 121/578 (20%), Positives = 241/578 (41%), Gaps = 18/578 (3%) Query: 535 GINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEE 594 +N TE + E+ + D+ E ++ ++ +N ++G++ +E Sbjct: 375 WLNRKFTEYHREIESKQRALSLASQVFDNASEGIMVTGSDNRLLTVNDAFVDITGYSADE 434 Query: 595 ALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTL 654 +G + + + +++ + ++ ++G + SI ++ Sbjct: 435 VVGKNPKFLQ--SGRHDETFYRSMWQMINTSGYWRGEIWNRRKNGEVFPQWLSIQAVTDS 492 Query: 655 DGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNST-HQR 713 G + I D+TE +++ +L Y + D LT+L NR ++ L Q+ Sbjct: 493 AGMARNYIASITDLTERKQVEEKLRYLSDFDPLTNLPNRRLLGYRVDQTLSLSRRQPDQQ 552 Query: 714 HALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN 773 AL++IDLD FK +NDS GH GD +L+++A + ++R D ++RLGGDEF +L+P+ + Sbjct: 553 FALLYIDLDHFKNINDSLGHRFGDEILQKVAKRITELVREGDTVSRLGGDEFMILMPELH 612 Query: 774 -VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYAS 832 +E A +A RI+ + + + S GI + ++ +++ AD A + + Sbjct: 613 KLEQAANLAERILHNIAQ-PLENDSH-LMITPSVGIAVYPNDGDSFDKLLRNADAAVHFA 670 Query: 833 KNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLI 892 K GR Y + SER + + + + ++ + + + R + + Sbjct: 671 KRQGRNNYQFYTAEMNQRASERLQVEISLR-KAVENQEFELFYQPQLNLR--DGSLAGVE 727 Query: 893 SLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVA--SKGISISLPL 949 +L W ++ F + L + V E +Q A+ A ++ ++S+ + Sbjct: 728 ALIRWRHPNEGLVPPNRFIPLAEETGLILQIGSWVLVEACRQGAEWAAKSTEPFTMSVNV 787 Query: 950 SVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVL 1005 SV LV ++ L S L P+ L + I ++ E + +L+ G ++ L Sbjct: 788 SVRQFR-PELVEEVRSALLTSGLSPKSLVIEITESTLMQDEEKTLTLLHELKELGVQLSL 846 Query: 1006 SQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPV 1065 G LK D L +D +++ N D + + I A G+ T+A + Sbjct: 847 DDFGTGYSSMAYLKRFNLDQLKIDRAFISDLPQNPDDAAITSAIIDVASHFGLVTVAEGI 906 Query: 1066 VLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNSSYFA 1103 P + L+ +G G P + L YFA Sbjct: 907 EKPEQAEFLASVGCIEGQGYYYEKPIPANDLTER-YFA 943 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 36/258 (13%), Positives = 89/258 (34%), Gaps = 6/258 (2%) Query: 249 MMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAM 308 ++ + LL + + + E + + + Sbjct: 342 LLQVTHQEDQVQIYIFLLLATIFSLGFSLLFSGWLNRKFTEYHREIESKQRALSLASQVF 401 Query: 309 EYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLIS 368 + ++ G+ + G++ + L N A GYS +E+ G + L + + ++I Sbjct: 402 DNASEGIMVTGSDNRLLTVNDAFVDITGYSADEVVGKNPKFLQSGRHDETFYRSMWQMI- 460 Query: 369 GEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLM 428 + E +NG+V L++ V + G +IA I D+ E K+ E+ + L Sbjct: 461 NTSGYWRGEIWNRRKNGEVFPQWLSIQAVTDSAGMARNYIASITDLTERKQVEEKLRYLS 520 Query: 429 ERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLP----EDR 484 + L N + + + + ++ + + + +++ + + E Sbjct: 521 DFDPLTNLPNRR-LLGYRVDQTLSLSRRQPDQQFALLYIDLDHFKNINDSLGHRFGDEIL 579 Query: 485 QHAEKVIRDSLQSRSPFK 502 Q K I + ++ Sbjct: 580 QKVAKRITELVREGDTVS 597 Score = 69.7 bits (170), Expect = 7e-10, Method: Composition-based stats. Identities = 19/137 (13%), Positives = 44/137 (32%), Gaps = 2/137 (1%) Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQV 474 E R + Q+ + + + GI + + + ++ Sbjct: 381 TEYHREIESKQRALSLASQVFDNASEGIMVTGSDNRLLTVNDAFVDITGYSADEVVGKNP 440 Query: 475 WYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALAN-RVLNKEGEVERL 533 + D + + + + + ++ E K+G + L+ V + G Sbjct: 441 KFLQSGRHD-ETFYRSMWQMINTSGYWRGEIWNRRKNGEVFPQWLSIQAVTDSAGMARNY 499 Query: 534 LGINMDMTEVKQLNEAL 550 + D+TE KQ+ E L Sbjct: 500 IASITDLTERKQVEEKL 516 >UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YCL1_NITMU Length = 1054 Score = 828 bits (2141), Expect = 0.0, Method: Composition-based stats. Identities = 150/703 (21%), Positives = 260/703 (36%), Gaps = 38/703 (5%) Query: 414 INELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQ 473 + E + T + R E+ + + + +K L + Sbjct: 362 MEEQQATTRELSNAKLRTERILESITDAFYTLDREWRFTYVNKEAENLLQRNREDLLGRV 421 Query: 474 VWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERL 533 W E ++ +L E D A E L Sbjct: 422 CWEEFKETAG-TTFDREYHRALMENRTVTFEEFYVPLDE--WFEVHAYP------SEEGL 472 Query: 534 LGINMDMTEVKQLNEALFQEK---ERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGW 590 D+TE K+ +A + + LD +A++ M I F N AE++ GW Sbjct: 473 TVYFRDITERKESEQARQEAHVRIRQQASLLDKATDAIIVFGMDNCIEFWNQGAERLYGW 532 Query: 591 TQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITP 650 T EE +G + + DN + + A S ++ R +V T Sbjct: 533 TSEEVMGREVEMLY-----DNVAVFDEANRALLSSGEWRGELAQRRRDQSMLNVEAHWTL 587 Query: 651 LSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNST 710 + DG + D+T+ + ++ + A +D+LT L NR +L L Sbjct: 588 VRNDDGEPQAIFAINTDITQRKSAENEILHLALYDSLTGLPNRRLLLDRLGHALAVSARN 647 Query: 711 HQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLL- 769 + AL+FIDLD FK +ND+ GH GD LLR++A + S +R SD +ARLGGDEF ++L Sbjct: 648 QRMGALLFIDLDNFKLLNDTLGHDMGDLLLRQVAPRLSSCVRESDTVARLGGDEFVVILM 707 Query: 770 ----PDCNVE--SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMS 823 D + I RI SA F + +H + S GI L +D + E++ Sbjct: 708 GDFGEDHDEALTQISTICERIRSAFIQ-PFNLDPYIHHITPSIGIALFNDQSQTTNELLK 766 Query: 824 QADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRI 883 +AD+A Y +K GR + ++P AA + RA + + ++ + N+ ++ Sbjct: 767 RADLAMYQAKASGRNAMRFFDPDMQAAMNARAILESEL-YKSWERNEFILHYQLQVD--- 822 Query: 884 PEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK- 941 + +L W ++ F + L L V Q A Sbjct: 823 -SRGIIGAEALVRWQHPRRGLLPPSEFIPQAEETGLILPLGEWVLETACNQLASWALQPE 881 Query: 942 --GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQK 995 +++S+ +S V ++ L+ + P+ L L + ++ + + Sbjct: 882 TVQLNLSVNVSSLQFCQPDFVEQVISILDRTGANPQRLKLELTESILVHDMDDTIAKMMT 941 Query: 996 LRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQR 1055 L+ G L G LK D++ +D +V + D ++ I A+ Sbjct: 942 LKARGVGFALDDFGIGYSSLYYLKRLPLDWVKIDRSFVRDVLTDNNDATIVRTILLLAKS 1001 Query: 1056 LGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 +G+ IA V D L+ G G + + PL+ Sbjct: 1002 MGLAVIAEGVETGAQKDFLASHGCTAYQGYLFSRPLPLEQFER 1044 Score = 129 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 52/312 (16%), Positives = 104/312 (33%), Gaps = 21/312 (6%) Query: 244 MMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETH 303 ++ L+ S+L ++++S L + ++ M +A + +S ++ Sbjct: 320 ALLVLLGGFVVSMLTAMVSFVLSGNKEKAAALGHVNKKLLLA-MEEQQATTRELSNAKLR 378 Query: 304 FRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGL-TFQQLTWPEDLNKDLQQ 362 +E + E ++ NK L ++E+L G +++ D + Sbjct: 379 TERILESITDAFYTLDREWRFTYVNKEAENLLQRNREDLLGRVCWEEFKETAGTTFDREY 438 Query: 363 VEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQ 422 L+ T+ E+ Y + W + + DI E K +EQ Sbjct: 439 HRALMENRTVTF--EEFYVPLDE---WFEVHAYP------SEEGLTVYFRDITERKESEQ 487 Query: 423 VNQQLMERIT---LANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECV 479 Q+ RI + I + + I W++ LY +V Sbjct: 488 ARQEAHVRIRQQASLLDKATDAIIVFGMDNCIEFWNQGAERLYGWTSEEVMGREVEMLY- 546 Query: 480 LPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRH-IRALANRVLNKEGEVERLLGINM 538 D +L S ++ E +D + A V N +GE + + IN Sbjct: 547 ---DNVAVFDEANRALLSSGEWRGELAQRRRDQSMLNVEAHWTLVRNDDGEPQAIFAINT 603 Query: 539 DMTEVKQLNEAL 550 D+T+ K + Sbjct: 604 DITQRKSAENEI 615 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 31/259 (11%), Positives = 86/259 (33%), Gaps = 10/259 (3%) Query: 285 MVMYAFRAERKHISESETHFRN---AMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEE 341 + + + E+ R ++ + + + G + N+ + G++ EE Sbjct: 477 RDITERKESEQARQEAHVRIRQQASLLDKATDAIIVFGMDNCIEFWNQGAERLYGWTSEE 536 Query: 342 LRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTD 401 + G + L +++ + L+S + E R+ ++ +LVR+ D Sbjct: 537 VMGREVEMLY--DNVAVFDEANRALLSS--GEWRGELAQRRRDQSMLNVEAHWTLVRNDD 592 Query: 402 GTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFEL 461 G P A DI + K E L +L + + + + R + Sbjct: 593 GEPQAIFAINTDITQRKSAENEILHLALYDSLTGLPNRRLL--LDRLGHALAVSARNQRM 650 Query: 462 YEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALAN 521 + N+++ + + + + + L S + + + + + + Sbjct: 651 GALLFIDLDNFKLLNDTLGHDMGDLLLRQVAPRLSS-CVRESDTVARLGGDEFVVILMGD 709 Query: 522 RVLNKEGEVERLLGINMDM 540 + + + ++ I + Sbjct: 710 FGEDHDEALTQISTICERI 728 >UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMB6_9PROT Length = 922 Score = 828 bits (2141), Expect = 0.0, Method: Composition-based stats. Identities = 134/633 (21%), Positives = 252/633 (39%), Gaps = 37/633 (5%) Query: 487 AEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQL 546 A + R + ++ R + + + R+ + E +N ++ E + Sbjct: 295 AWVLARGVMDRGLAEEMRIRELNEQLEQRVLERTARLESANQE------LNREIAERSRA 348 Query: 547 NEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHI 606 L R+ E ++ D I +N + +G++ E+ +G + Sbjct: 349 EAEL-----RIAAIAFDSQEGMMVTDAHGVILRVNRAFVEETGYSAEDVVGRKRTML--T 401 Query: 607 TFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQ 666 + ++ L + ++ A + +V ++G Y V +I+ + G V Sbjct: 402 SGREDAALDDAMWETVQRCGAWQGEVWDRRKNGEVYPVWLTISAVKGQGGLVTHYVATHI 461 Query: 667 DVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKA 726 D+T+ + + QL A +D LT L NR +L +L + + A++FIDLD FKA Sbjct: 462 DITQRKAVEDQLHKLAFYDPLTQLPNRRLLLDRLGHVLAGSTRSRNQGAIMFIDLDNFKA 521 Query: 727 VNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE-----SARFIA 781 +ND+ GH GD LL E+A + S +R D +ARLGGDEF +++ D + +A Sbjct: 522 LNDTQGHDVGDRLLAEVAQRLKSSVRQCDTVARLGGDEFVVMVQDLAADSMVVAQVEAVA 581 Query: 782 TRIISAVNDYHFIWEGRVH--------RVGASAGITLIDDNNHQAAEVMSQADIACYASK 833 +I++A++ + + AS GITL ++ E++ QAD+A Y +K Sbjct: 582 GKILAALDCPYRLVFDAELGRRNALNYHCTASIGITLFGAHSTNVDELLKQADLAMYQAK 641 Query: 834 NGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLIS 893 + GR + ++P+ AA + R A+ D + ++ Q + R + Sbjct: 642 DSGRNAIRFFDPEMQAAITSRVALEADLR-EAVEAGQFQLYYQPQV--VGESHRLTGAEA 698 Query: 894 LKLWSC-EGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK---GISISLPL 949 L W ++ F + L L + V Q A + +++++ + Sbjct: 699 LLRWHHSRRGMVPPSEFIPLAEETGLILPLGQWVLETACAQLATWASQPEMAQLTVAVNV 758 Query: 950 SVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVL 1005 S + V+ +L L ++ P+ L L + ++ + E + L+ G L Sbjct: 759 SAHQIRQTDFVDQVLAVLADAGANPQRLKLELTESLLVSNVEDIIAKMTLLKSRGVGFSL 818 Query: 1006 SQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPV 1065 G + LK D L +D V + D + +I A+ LG+ IA V Sbjct: 819 DDFGTGYSSLSYLKRLPLDQLKIDQSFVNEVLTDANDAAIAKMIVALAESLGLAVIAEGV 878 Query: 1066 VLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 + L+ G G + + PL Sbjct: 879 ETEEQRNFLAESGCHAYQGYLFSKPLPLAGFEQ 911 Score = 145 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 46/332 (13%), Positives = 103/332 (31%), Gaps = 15/332 (4%) Query: 199 AITLTLSWLSMLYLPWPFTFIIVL-------LMWSAVRLPRMEAFLIFLTTVMMVSLMMA 251 ++ W +P + V+ L+ +A R ++ +++ Sbjct: 238 FGGVSRIWAVSTLPEFPEVGLHVVVGVSKQDLLAAANRNLVQALAILLAVWLLVFGGAWV 297 Query: 252 ADPSLLA---TPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRA-ERKHISESETHFRNA 307 ++ + L ++ A + + R + +E+E Sbjct: 298 LARGVMDRGLAEEMRIRELNEQLEQRVLERTARLESANQELNREIAERSRAEAELRIAAI 357 Query: 308 MEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLI 367 S GM + G L+ N+A + GYS E++ G LT + + + + Sbjct: 358 AFDSQEGMMVTDAHGVILRVNRAFVEETGYSAEDVVGRKRTMLTSGREDAALDDAMWETV 417 Query: 368 SGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQL 427 + E +NG+V L +S V+ G +++A DI + K E +L Sbjct: 418 Q-RCGAWQGEVWDRRKNGEVYPVWLTISAVKGQGGLVTHYVATHIDITQRKAVEDQLHKL 476 Query: 428 MERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHA 487 L + + ++ + R I N++ + + Sbjct: 477 AFYDPLTQLPNRRLL--LDRLGHVLAGSTRSRNQGAIMFIDLDNFKALNDTQGHDVGDRL 534 Query: 488 EKVIRDSLQSRSPFKLEFRITVKDGIRHIRAL 519 + L+S S + + + + Sbjct: 535 LAEVAQRLKS-SVRQCDTVARLGGDEFVVMVQ 565 Score = 65.5 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 22/142 (15%), Positives = 48/142 (33%), Gaps = 7/142 (4%) Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPN 471 +I E R E RI G+ + I ++ E Sbjct: 340 REIAERSRAEAEL-----RIAAIAFDSQEGMMVTDAHGVILRVNRAFVEETGYSAEDVVG 394 Query: 472 WQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRH-IRALANRVLNKEGEV 530 + ED + + +++Q ++ E K+G + + + V + G V Sbjct: 395 RKRTMLTSGREDAA-LDDAMWETVQRCGAWQGEVWDRRKNGEVYPVWLTISAVKGQGGLV 453 Query: 531 ERLLGINMDMTEVKQLNEALFQ 552 + ++D+T+ K + + L + Sbjct: 454 THYVATHIDITQRKAVEDQLHK 475 >UniRef50_Q2RRN9 Sensor protein n=3 Tax=Proteobacteria RepID=Q2RRN9_RHORT Length = 1301 Score = 828 bits (2140), Expect = 0.0, Method: Composition-based stats. Identities = 133/695 (19%), Positives = 260/695 (37%), Gaps = 24/695 (3%) Query: 414 INELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQ 473 I + +R + V ++ R E +GI + + + ++ ++ PP Sbjct: 612 IADHRRKQMVLRESEARFRATFEQAAVGIAHLDPDGHWLRVNHKLCDIVGYPPDELLTLS 671 Query: 474 VWYECVLPEDRQHAEKVIRDSLQSR-SPFKLEFRITVK-DGIRHIRALANRVLNKEGEVE 531 + + P+D + + + L + + +E R K I + V + Sbjct: 672 -FQDITHPDDLRADLRQMEALLAGQIDTYTIEKRYIRKTGESLWINLTVSLVRDIHNAPA 730 Query: 532 RLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWT 591 + + ++ K+ L + E + D+ I +NP +++ + Sbjct: 731 YFISVVENIQSRKEAELQLL----LASAVFSNSMEGIFVTDLKGSILAVNPAFSQITLYE 786 Query: 592 QEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPL 651 E LG + + N ++ + + ++ R G + SI+ + Sbjct: 787 AAEVLGRNARILQ--SGRQNREFYVALWQDVLTIGSWRGEIWNRRRDGEVFPEWLSISSV 844 Query: 652 STLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTH 711 G + + D++ + + + A HD LT L NR +L ++ T Sbjct: 845 RNHQGEVTNYIGIFSDLSRIKHSEAKFHHLAHHDPLTGLPNRLLLRSRLDHAIERARRTG 904 Query: 712 QRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD 771 R A++F+DLDRFK +NDS GH AGD LLR L + + + L + LARLGGDEF ++ D Sbjct: 905 GRCAVLFLDLDRFKMINDSLGHRAGDTLLRTLGARLTACLGDTGTLARLGGDEFVAVIED 964 Query: 772 CN-VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACY 830 + + + IA ++ + + + EG +G S GI+L ++ ++ AD A Sbjct: 965 IDGIPAVGTIALTMLERLREPCRLSEGPEVCIGGSVGISLFPEDGDNPDTLLQHADTALG 1024 Query: 831 ASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLW 890 K G G Y S R + + +++ ++ + + + Sbjct: 1025 QVKGAGGGAYGFYTRTLTERISARLGLEAGLR-HALEQGDFLLHYQPLIA--LGTGEVEG 1081 Query: 891 LISLKLWSCEGE---IIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK-GISI- 945 + +L W G +I F D L L V E + + + +++ Sbjct: 1082 VEALVRW--AGGDGLLIPPDRFIPLAEDTGLIVPLGEWVLGEACRTMQRWRSQGMPLTVL 1139 Query: 946 SLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH----AESVQKLRLAGC 1001 ++ LS + + LE + LP +L L I AI++ + L+ G Sbjct: 1140 AVNLSPRQFRDHAIPALVRRVLEQTGLPASVLELEITESAIMEQGAAAEAQMTGLKHLGV 1199 Query: 1002 RIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTI 1061 R+ + G +L+ D + +D ++ + E + I + L + + Sbjct: 1200 RLAIDDFGTGYSSLANLRRFPIDKIKIDQSFVRDIPRDAAAEEITATIIAMGRTLKLHVL 1259 Query: 1062 AGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 A V +D LS D G + + L Sbjct: 1260 AEGVETTDQLDFLSRKQCDSAQGYLFSRPITAAAL 1294 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 97/379 (25%), Positives = 165/379 (43%), Gaps = 32/379 (8%) Query: 243 VMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESET 302 + ++ L AD ++ A ++ + PF + L A ++ R ++ + ESE Sbjct: 569 IPIIMLTAKADEAMRARMLRGVVQDYLFKPFSRLELLARADG-LIADHRRKQMVLRESEA 627 Query: 303 HFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQ 362 FR E +A+G+A + +G WL+ N LC +GY +EL L+FQ +T P+DL DL+Q Sbjct: 628 RFRATFEQAAVGIAHLDPDGHWLRVNHKLCDIVGYPPDELLTLSFQDITHPDDLRADLRQ 687 Query: 363 VEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQ 422 +E L++G+I+TY++EKRY + G+ +W L VSLVR P YFI+ +E+I K E Sbjct: 688 MEALLAGQIDTYTIEKRYIRKTGESLWINLTVSLVRDIHNAPAYFISVVENIQSRKEAEL 747 Query: 423 VNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPE 482 + GI+ +LK +I + + ++ + Sbjct: 748 QLLLA----SAVFSNSMEGIFVTDLKGSILAVNPAFSQITLYEAAEVLGRNARILQSGRQ 803 Query: 483 DRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA-NRVLNKEGEVERLLGINMDMT 541 +R+ + +D L S ++ E +DG L+ + V N +GEV +GI D++ Sbjct: 804 NREFYVALWQDVLTIGS-WRGEIWNRRRDGEVFPEWLSISSVRNHQGEVTNYIGIFSDLS 862 Query: 542 EVKQLNEALFQEKE-----------RLHITLDSIGE---------AVVCIDMAMKITFMN 581 +K L LD E AV+ +D+ + +N Sbjct: 863 RIKHSEAKFHHLAHHDPLTGLPNRLLLRSRLDHAIERARRTGGRCAVLFLDLD-RFKMIN 921 Query: 582 PVAEKMSGWTQEEALGVPL 600 G + L L Sbjct: 922 DS----LGHRAGDTLLRTL 936 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 33/288 (11%), Positives = 83/288 (28%), Gaps = 31/288 (10%) Query: 302 THFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWP-------E 354 F ++ + + N A Q + E+ G ++ E Sbjct: 26 ADFEAIFRALPGPHLILDADLKIAAVNDAYLQATLTRRGEILGRGIFEVFPDNPNDPVSE 85 Query: 355 DLNKDLQQVEKLISGEIN-TYSMEKRYYNRNG------DVVWALLAVSLVRHTDGTPLYF 407 + + +++S S++K + G ++ + + V DG +Y Sbjct: 86 GVRNLRASLLRVLSSRTQDVMSIQKYDVRKPGGGAGDFELRYWSPINTPVLGADGAVVYI 145 Query: 408 IAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELK-----PNIFSWDKRMFELY 462 + +D+ E + I++ + + + + LY Sbjct: 146 VHYAQDLTEYYASSGQQDFAEGGKDDIVRQMEAEIFQRSKEVAKSNLKLKEANSELAILY 205 Query: 463 EIPPHIKPNWQVWYECVLPEDRQHA----------EKVIRDSLQSRSPFKLEFRITVKDG 512 E + ++ V E R ++ + + + R Sbjct: 206 EKTRELDDIKTQFFANVSHELRTPLTLILGPVTSRQEDPTLAPAEKRVLDMVARNARLL- 264 Query: 513 IRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHIT 560 +RH+ L + + G+ R+ + D+T + + + F Sbjct: 265 LRHVNDLLDIAKLEAGQ-MRMQYVRTDVTRLCRFALSHFDSLAEERAI 311 Score = 43.5 bits (102), Expect = 0.044, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 47/137 (34%), Gaps = 15/137 (10%) Query: 548 EALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHIT 607 E + ++ + +D +KI +N + + + E LG + V Sbjct: 19 ERHPEGGADFEAIFRALPGPHLILDADLKIAAVNDAYLQATLTRRGEILGRGIFEVFPDN 78 Query: 608 FGDN-GPLMENIYSAD------TSRSAIEQDVVLHCRSGG-------SYDVHYSITPLST 653 D + N+ ++ ++ + + GG Y + TP+ Sbjct: 79 PNDPVSEGVRNLRASLLRVLSSRTQDVMSIQKYDVRKPGGGAGDFELRYWSPIN-TPVLG 137 Query: 654 LDGSNIGSVLVIQDVTE 670 DG+ + V QD+TE Sbjct: 138 ADGAVVYIVHYAQDLTE 154 >UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKJ2_CELJU Length = 798 Score = 828 bits (2139), Expect = 0.0, Method: Composition-based stats. Identities = 136/683 (19%), Positives = 253/683 (37%), Gaps = 24/683 (3%) Query: 419 RTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYEC 478 R + I + + + + + Sbjct: 108 RAFADLSLSESKTRALLSNLPDIIIRLHREGAVLDMQVGSYVF--DMGEWLHSAEDGSYH 165 Query: 479 VLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINM 538 + + I +L+ + LEF+ + +++ +L + Sbjct: 166 LPSDIAALIGTRIDAALRGKGMQMLEFQWSRDPMCVRHWEARIVPRDRQ----EVLLVVR 221 Query: 539 DMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGV 598 ++T+ +Q L ++ EA++ D +I +N E + G+ +++ LG Sbjct: 222 EITQRRQQENQL----RLWAKVFEASNEAILITDANFRIISVNRAYETIMGYREQDVLG- 276 Query: 599 PLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSN 658 + T+ N+ S R + +++ +SG + +S+T ++ G Sbjct: 277 -VDTLEVGAKLQTYSFYRNLVSLLKERGHWQGELINQRKSGEEFPSWFSVTQVTNSRGEP 335 Query: 659 IGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVF 718 + + D+TE + Q+ + A HDALT L NR +L + + V ++ ++F Sbjct: 336 EHYIAIFNDITEHKNSRAQIEFLAHHDALTGLPNRILLNDRLEMAITQVRRQGEKLGILF 395 Query: 719 IDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVES-A 777 IDLDRFK VNDS GH GD +L+E A + + +R+ D ++RLGGDEF +L P E Sbjct: 396 IDLDRFKNVNDSLGHGVGDQILQEAAKRLTANVRTGDTVSRLGGDEFVVLFPRVRTEGNL 455 Query: 778 RFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGR 837 + ++ + + +G + S GI + D+ ++ AD A Y +K GR Sbjct: 456 ADLTIKLREQL-QLPYTVDGISLHITPSIGIAVYPDDGEDPNTLIKNADAAMYLAKEKGR 514 Query: 838 GRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW 897 Y P A +R + D + I + + L +L W Sbjct: 515 NNYQFYTPTLNAKTLDRLKLESDLR-SAIDAGDFELHYQPQI--IGSSGQLWGLEALIRW 571 Query: 898 SC-EGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA--VASKGISISLPLSVAGL 954 E +I F + L L V + +Q A+ + +S+ +S Sbjct: 572 RHRERGLISPAEFIPLAEETGLIVGLGDWVLVQAVKQLAEWRRQGHNHLVVSVNISALQF 631 Query: 955 SSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRLAGCRIVLSQVGR 1010 ++ + L+ + L P + L + ++ ++++ LR G RI + G Sbjct: 632 RQGDFLDRVKHILQEAQLVPDAIELELTETMLMQDVQSAIQTLKGLRELGFRIAIDDFGT 691 Query: 1011 DLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLV 1070 N L+ + L +D + ++ I AQ LG +TIA V Sbjct: 692 GFSSLNYLRHLPINVLKIDQSFVREMLQEPESLAIVESIIALAQALGKETIAEGVETRAE 751 Query: 1071 MDTLSGIGVDLIYGEVIADAQPL 1093 D L G L+ G A P Sbjct: 752 FDVLQARGCRLMQGYFFARPMPP 774 Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats. Identities = 30/243 (12%), Positives = 75/243 (30%), Gaps = 7/243 (2%) Query: 281 NIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQE 340 ++ + R + + + E S + + + + N+A +GY ++ Sbjct: 217 LLVVREITQRRQQENQLR----LWAKVFEASNEAILITDANFRIISVNRAYETIMGYREQ 272 Query: 341 ELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHT 400 ++ G+ ++ + + L+ E + E ++G+ + +V+ V ++ Sbjct: 273 DVLGVDTLEVGAKLQTYSFYRNLVSLLK-ERGHWQGELINQRKSGEEFPSWFSVTQVTNS 331 Query: 401 DGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFE 460 G P ++IA DI E K + + L L I + + +R E Sbjct: 332 RGEPEHYIAIFNDITEHKNSRAQIEFLAHHDALTGLPNR--ILLNDRLEMAITQVRRQGE 389 Query: 461 LYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA 520 I ++ + + + L + D + Sbjct: 390 KLGILFIDLDRFKNVNDSLGHGVGDQILQEAAKRLTANVRTGDTVSRLGGDEFVVLFPRV 449 Query: 521 NRV 523 Sbjct: 450 RTE 452 Score = 77.8 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 48/352 (13%), Positives = 101/352 (28%), Gaps = 30/352 (8%) Query: 245 MVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHF 304 + M+ L + + Y ++ + + +S SE+ Sbjct: 61 LPIAMVTGLDDLESINKAYESGATDFITKPVSWGTLPYRLQYLLRASRAFADLSLSESKT 120 Query: 305 RNAMEYSAIGMALVGTEGQWL------QTNKALCQFLGYSQEELRGLTFQQLTWPEDLNK 358 R + + + EG L +S E+ P D+ Sbjct: 121 RALLSNLPDIIIRLHREGAVLDMQVGSYVFDMGEWL--HSAED------GSYHLPSDIAA 172 Query: 359 DL-QQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINEL 417 + +++ + G+ +E ++ V + R + + +I + Sbjct: 173 LIGTRIDAALRGKGMQM-LEFQWSRDPMCVRHWEARIVP-RDRQE----VLLVVREITQR 226 Query: 418 KRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYE 477 ++ E + EA I + I S ++ + Sbjct: 227 RQQENQLR----LWAKVFEASNEAILITDANFRIISVNRAYETIMGYREQDVLGVDTLEV 282 Query: 478 CVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANR-VLNKEGEVERLLGI 536 + + + L+ R ++ E K G + V N GE E + I Sbjct: 283 GAKLQTYS-FYRNLVSLLKERGHWQGELINQRKSGEEFPSWFSVTQVTNSRGEPEHYIAI 341 Query: 537 NMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCID-MAMKITFMNPVAEKM 587 D+TE K + H L + ++ D + M IT + EK+ Sbjct: 342 FNDITEHKNSRAQIEFLAH--HDALTGLPNRILLNDRLEMAITQVRRQGEKL 391 >UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P0M4_CHRVO Length = 633 Score = 827 bits (2137), Expect = 0.0, Method: Composition-based stats. Identities = 138/625 (22%), Positives = 256/625 (40%), Gaps = 21/625 (3%) Query: 485 QHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVK 544 + + P E + + R++ N+ LN +G+ L D++ + Sbjct: 11 PQLAEALFRHPGGAYPLTFETQDGEGESERYLEVTVNQ-LNYQGDA-YLCATARDISGRR 68 Query: 545 QLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVL 604 Q L +S EA++ D +I +N ++G+ + E G + Sbjct: 69 QTERQL----RLAAQVFESSNEAILISDPDNRILTVNRAFGHITGYGEAEVRGSKASMLF 124 Query: 605 HITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLV 664 + + ++ R ++ +SG + +I+ L G V + Sbjct: 125 --SDRHEPAFFQQMWQTLQQRGQWSGEIWNRRKSGEHFPCWVNISVLQDGQGEISHFVAL 182 Query: 665 IQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRF 724 D++E ++ ++ + A +DALT L NR +L ++ H + A++F+DLD F Sbjct: 183 FTDISERKEQEARVQHMAEYDALTDLPNRVLVNDRLHQAIRQAELQHNQLAVLFVDLDHF 242 Query: 725 KAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN-VESARFIATR 783 K +ND+ GH AGD LL+E+A + +R D + R GGDEF L+LP N A IA R Sbjct: 243 KNINDTLGHCAGDELLKEVARRLAGAVRGLDTVGRTGGDEFVLILPSINQPGEAAQIAER 302 Query: 784 IISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVY 843 I+ + F VG S GI+L+ D+ ++ AD+A Y +K GR Y Sbjct: 303 ILRTIQQ-PFQIGEHSLVVGCSIGISLMPDDGSDIQTLLMNADLAMYHAKAHGRNTFRFY 361 Query: 844 EPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGE 902 + +ER M + R +++ QL ++ R L +L W + Sbjct: 362 TREMNTQVAERLLME-NRLRRAMEQEQLYLVYQPQYDM--AGQRLLGCEALLRWRDPDEG 418 Query: 903 IIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA--VASKGISISLPLSVAGLSSATLV 960 +I F D L L R V + +QA+ + + +++ +S L + Sbjct: 419 LIMPGRFIPVAEDTGLIVPLGRWVLDQACRQASLWLRAGLEPMRVAVNVSAHQLMRHDFI 478 Query: 961 NDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLSQVGRDLQIFN 1016 +D+ E L+ LP L L + ++ A+ + ++ G R+ + G Sbjct: 479 DDVREALQRHALPGHCLELEVTESTLMADADLASRQLAVIKAMGVRLAIDDFGTGYSSLA 538 Query: 1017 SLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSG 1076 LK D + +D +++ G+ + +++ I A LGM+T+A V L Sbjct: 539 YLKRFAPDLVKIDRSFISDLPGDEENAAIVSAIVHLAGALGMETLAEGVENENQQRFLQT 598 Query: 1077 IGVDLIYGEVIADAQPLDLLVNSSY 1101 +G + + G ++ + ++ Sbjct: 599 LGCEAMQGYLLGSPL-AEEMMTRRL 622 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 78/258 (30%), Gaps = 7/258 (2%) Query: 282 IMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEE 341 + R + + E S + + + + L N+A GY + E Sbjct: 59 ATARDISGRRQTERQLR----LAAQVFESSNEAILISDPDNRILTVNRAFGHITGYGEAE 114 Query: 342 LRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTD 401 +RG L QQ+ + + + +S E ++G+ + +S+++ Sbjct: 115 VRGSKASMLFSDRHEPAFFQQMWQTLQ-QRGQWSGEIWNRRKSGEHFPCWVNISVLQDGQ 173 Query: 402 GTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFEL 461 G +F+A DI+E K E Q + E L + + + + Sbjct: 174 GEISHFVALFTDISERKEQEARVQHMAEYDALTDLPNR--VLVNDRLHQAIRQAELQHNQ 231 Query: 462 YEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALAN 521 + +++ + + K + L T D I N Sbjct: 232 LAVLFVDLDHFKNINDTLGHCAGDELLKEVARRLAGAVRGLDTVGRTGGDEFVLILPSIN 291 Query: 522 RVLNKEGEVERLLGINMD 539 + ER+L Sbjct: 292 QPGEAAQIAERILRTIQQ 309 Score = 85.9 bits (212), Expect = 9e-15, Method: Composition-based stats. Identities = 31/228 (13%), Positives = 72/228 (31%), Gaps = 21/228 (9%) Query: 361 QQVEKLISGEINTYSMEKRYYNRNG-DVVWALLAVSLVRHTDGTPLYFIAQIEDINELKR 419 Q E L Y + + G + + V+ + + Y A DI+ ++ Sbjct: 12 QLAEALFRHPGGAYPLTFETQDGEGESERYLEVTVNQLNYQGDA--YLCATARDISGRRQ 69 Query: 420 TEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECV 479 TE+ + + E+ I + I + ++ + + Sbjct: 70 TERQLRLAAQ----VFESSNEAILISDPDNRILTVNRAFGHITGYGEAEVRGSKASMLFS 125 Query: 480 LPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVL-NKEGEVERLLGINM 538 + + + +LQ R + E K G + VL + +GE+ + + Sbjct: 126 DRHE-PAFFQQMWQTLQQRGQWSGEIWNRRKSGEHFPCWVNISVLQDGQGEISHFVALFT 184 Query: 539 DMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEK 586 D++E K+ + + E D+ ++ +N + Sbjct: 185 DISERKEQEAR-----------VQHMAEYDALTDLPNRVL-VNDRLHQ 220 >UniRef50_P72843 Regulatory components of sensory transduction system n=1 Tax=Synechocystis sp. PCC 6803 RepID=P72843_SYNY3 Length = 840 Score = 827 bits (2137), Expect = 0.0, Method: Composition-based stats. Identities = 158/698 (22%), Positives = 278/698 (39%), Gaps = 25/698 (3%) Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPN-IFSWDKRMFELYEIPPHIKP 470 E I + RT+ Q +A I+ + I ++ + + + Sbjct: 142 EQIEKTARTQAALMQSEINFAVAFNQSPDPIFIYGRNSGCIMDVNQPFCQFFGLTKQELV 201 Query: 471 N--WQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFR-ITVKDGIRHIRALA-NRVLNK 526 Q +Y V + RQ + + Q K E R I V D + +R + + + Sbjct: 202 GVSRQQFYFWVDEQQRQSFLRDLL-LWQKDGLVKFENREIEVYDQEKQVRTMLLSGEPME 260 Query: 527 EGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEK 586 V+ LL + D+TE ++ + L + L + ++V D+ IT++NP E+ Sbjct: 261 FNRVDCLLFVMRDITERRKAEKQL----KILSQACEQSPASIVITDVQGNITYVNPKFEE 316 Query: 587 MSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHY 646 +SG+ E LG + + E ++ S + ++G Y Sbjct: 317 ISGYKSAEVLGRNPRILK--SGNKTQEDYELMWKTLASGRNWHGEFHNRRKNGELYWERA 374 Query: 647 SITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQT 706 SI+P+S G V V +D+T+ ++ L + A +D LT L NR + +L+ +++ Sbjct: 375 SISPISNQQGIVTHYVAVKEDITKEKQQAEALFHQAHYDHLTGLPNRILAKDRLQQAIES 434 Query: 707 VNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFG 766 L+F+DLD FK VND+ GH AGD LL E++ + LR +D +ARLGGDEF Sbjct: 435 ALRQKHIFGLMFLDLDNFKKVNDTLGHDAGDQLLVEVSERLQRALRQTDTVARLGGDEFL 494 Query: 767 LLLPDCNVES-ARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQA 825 ++L + IA R++ + +G V S GIT+ D+ A ++ A Sbjct: 495 IILDQVSHSRKLMAIAQRLLRVMRQ-PVNLQGLEFFVHGSIGITVFPDDGFHADVLLRNA 553 Query: 826 DIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPE 885 D A YA+K GR + P A +R A+ + + + + + +L + S + Sbjct: 554 DTAMYAAKLAGRNMFRFFTPHMNQAAQQRMAIESELR-QGLSRQEFQILYQPIVS--LES 610 Query: 886 ARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV---ASK 941 + + +L W + F + L L + QAA + Sbjct: 611 GQIVGAEALMRWHNRLLGTVPPDQFIPIAEEVGLIVELGEWLLDNVCCQAAHWHSALGEQ 670 Query: 942 GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAIL-DHAESVQKLRLA- 999 +S+ +S L + V L L+ + P L L I IL ++ + ++ L Sbjct: 671 TFWVSVNVSPRQLKDSYFVAILQGFLQRYQVRPEWLELEITENLILEENGDLLKNLSDLE 730 Query: 1000 --GCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLG 1057 + L G N L+ + L +D + + L+ I A L Sbjct: 731 EENIALSLDDFGTGYSSLNYLRKFNFNSLKIDRSFVELLPHDNNTVGLVRAIIAMAHHLE 790 Query: 1058 MKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDL 1095 +K IA + P + L G D G + + A ++ Sbjct: 791 LKVIAEGIETPEQWNFLRLQGCDYGQGYLFSPAIAVEE 828 Score = 149 bits (377), Expect = 7e-34, Method: Composition-based stats. Identities = 36/259 (13%), Positives = 78/259 (30%), Gaps = 7/259 (2%) Query: 281 NIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQE 340 + + R K + A E S + + +G N + GY Sbjct: 268 LFVMRDITERRKAEKQLKI----LSQACEQSPASIVITDVQGNITYVNPKFEEISGYKSA 323 Query: 341 ELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHT 400 E+ G + L +D + + K ++ + E +NG++ W ++S + + Sbjct: 324 EVLGRNPRILKSGNKTQEDYELMWKTLAS-GRNWHGEFHNRRKNGELYWERASISPISNQ 382 Query: 401 DGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFE 460 G +++A EDI + K+ + L I + R Sbjct: 383 QGIVTHYVAVKEDITKEKQQAEALFHQAHYDHLTGLPNR--ILAKDRLQQAIESALRQKH 440 Query: 461 LYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA 520 ++ + N++ + + + + + LQ D I Sbjct: 441 IFGLMFLDLDNFKKVNDTLGHDAGDQLLVEVSERLQRALRQTDTVARLGGDEFLIILDQV 500 Query: 521 NRVLNKEGEVERLLGINMD 539 + +RLL + Sbjct: 501 SHSRKLMAIAQRLLRVMRQ 519 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 56/282 (19%), Positives = 111/282 (39%), Gaps = 19/282 (6%) Query: 283 MTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTE-GQWLQTNKALCQFLGYSQEE 341 + + + + +SE +F A S + + G G + N+ CQF G +++E Sbjct: 140 LEEQIEKTARTQAALMQSEINFAVAFNQSPDPIFIYGRNSGCIMDVNQPFCQFFGLTKQE 199 Query: 342 LRGLTFQQLTWPEDLNKDLQQVEKLI----SGEINTYSMEKRYYNRNGDVVWALLAVSLV 397 L G++ QQ + D + + L+ G + + E Y++ V LL+ + Sbjct: 200 LVGVSRQQFYFWVDEQQRQSFLRDLLLWQKDGLVKFENREIEVYDQEKQVRTMLLSGEPM 259 Query: 398 RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKR 457 + + DI E ++ E+ + ++ A E I +++ NI + + Sbjct: 260 EFN--RVDCLLFVMRDITERRKAEKQLKI----LSQACEQSPASIVITDVQGNITYVNPK 313 Query: 458 MFELYEIPPHIKPNWQVWYECV---LPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIR 514 E+ ED + ++ +L S + EF K+G Sbjct: 314 FEEISGYKSAEVLGRNPRILKSGNKTQEDYE----LMWKTLASGRNWHGEFHNRRKNGEL 369 Query: 515 HI-RALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKE 555 + RA + + N++G V + + D+T+ KQ EALF + Sbjct: 370 YWERASISPISNQQGIVTHYVAVKEDITKEKQQAEALFHQAH 411 Score = 79.3 bits (195), Expect = 8e-13, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 65/183 (35%), Gaps = 12/183 (6%) Query: 500 PFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHI 559 PF+ E IT + +L K ++E + + + AL Q + + Sbjct: 110 PFQQEEIITRLQLQLKLHQTNQALLQKNQQLE------EQIEKTARTQAALMQSEINFAV 163 Query: 560 TLDSIGEAVVCIDMA-MKITFMNPVAEKMSGWTQEEALGVPLLTV-LHITFGDNGPLMEN 617 + + + I +N + G T++E +GV + + + Sbjct: 164 AFNQSPDPIFIYGRNSGCIMDVNQPFCQFFGLTKQELVGVSRQQFYFWVDEQQRQSFLRD 223 Query: 618 --IYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKML 675 ++ D +++ ++ + + S P+ + V++D+TE RK Sbjct: 224 LLLWQKDGLVKFENREIEVYDQEKQVRTMLLSGEPM--EFNRVDCLLFVMRDITERRKAE 281 Query: 676 RQL 678 +QL Sbjct: 282 KQL 284 >UniRef50_C3X4J8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Oxalobacter formigenes RepID=C3X4J8_OXAFO Length = 1077 Score = 827 bits (2136), Expect = 0.0, Method: Composition-based stats. Identities = 153/701 (21%), Positives = 278/701 (39%), Gaps = 25/701 (3%) Query: 410 QIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIK 469 E +L + V Q R+ + IW + ++ +++ + Sbjct: 380 VEERTEDLNKVNAVLAQSEARLKSVFDNIPDLIWLKNTAGVYLTCNRAFENFFDLEENRI 439 Query: 470 PNWQVWYECVLPEDRQH--AEKVIRDSLQSRSPFKLEFRITV--KDGIRHIRALANRVLN 525 + LP DRQ ++ P +E +T + V Sbjct: 440 IGKT---DAGLPTDRQADMLRPEGSRIIEEGKPEVMEQWVTNVQTGKRVFFDVIKAPVKT 496 Query: 526 KEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAE 585 +G + +LGI D+T K+ E L + + + EA++ + +I +NP E Sbjct: 497 PDGRLIGVLGIARDITRRKEDEEKL----QLAALVYKNSSEAILITNAKNEILAVNPAFE 552 Query: 586 KMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVH 645 +++G+T E +G + + + + ++ A + ++ ++G Y Sbjct: 553 RITGYTPAEIMGKDPKIL--SSGRQDKAFYKAMWDALGKKGFWRGELWNRKKNGEVYLAW 610 Query: 646 YSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQ 705 +I + DGS V + D TE ++ + A+ D LT L NR +L+ + Sbjct: 611 LTINVVYNEDGSVRYYVELSNDFTEKKEAEDMIWRQANFDFLTGLPNRRMLLDRLQQEIV 670 Query: 706 TVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEF 765 VN + ++ AL+F+DLD FK VND+ GH GD LL ++A + +R D ++RLGGDEF Sbjct: 671 KVNQSGKKLALLFLDLDNFKDVNDTLGHDMGDLLLVDVAGRLNECVREIDTVSRLGGDEF 730 Query: 766 GLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQ 824 ++L + ++ A + ++ ++ + +G + + AS G+T+ D+ + Sbjct: 731 AVILTELSDLRIAETVTQCMLRSLAQ-PYRLDGEIAYLSASIGMTVYPDDGTGIETLQKN 789 Query: 825 ADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIP 884 AD A YA+K GR R++ + AA R ++ D + ++E+Q ML + + Sbjct: 790 ADQALYAAKQAGRNRMSYFTASMQAAAQNRIRLANDMRI-AVEEHQFEMLYQPIV--ELG 846 Query: 885 EARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS--K 941 + +L W I+ F + L + F E ++ + Sbjct: 847 TGKIHKAEALIRWHHPLRGIVSPAEFISIAEETGLILTISDWAFREVAREVGRWRERYYP 906 Query: 942 GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAIL----DHAESVQKLR 997 G IS +S A S T +D ++L P + + I +L + + Sbjct: 907 GFQISFNISPALFQSKTDYSDWFDELARLKAPGSSIVMEITEGVLLVSNWQVIAQLTEFH 966 Query: 998 LAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLG 1057 G I L G + LK DYL +D N++ D L + A +L Sbjct: 967 RHGMEIALDDFGTGYSSLSYLKKFEIDYLKIDQAFVKNIENEPKDMALCEAMIVMAHKLD 1026 Query: 1058 MKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 MK IA V L+G G D G + ++ N Sbjct: 1027 MKVIAEGVQNERQRWLLAGAGCDYGQGYLFSEPLAAAEFEN 1067 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 65/430 (15%), Positives = 138/430 (32%), Gaps = 25/430 (5%) Query: 175 LLFKPHYLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPR-- 232 L Y R E L + T ++S + + Sbjct: 258 LSMAARYPQAWERIRNAEEGQFVTRDGLWSFNTLTPLMAGTKTSTGSSEIFSGGQGAQDV 317 Query: 233 ----MEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMY 288 + + + L+ + + + + L + + N + + + Sbjct: 318 SSYKWKVVTLLPLSAYNADLLYWGTKVVAISLALLALFFLGILFMVRLQEMRNQLLLNLE 377 Query: 289 AFRAERKH--------ISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQE 340 ER +++SE ++ + + L T G +L N+A F + Sbjct: 378 KRVEERTEDLNKVNAVLAQSEARLKSVFDNIPDLIWLKNTAGVYLTCNRAFENFFDLEEN 437 Query: 341 ELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRN-GDVVWALLAVSLVRH 399 + G T L + + ++I E ME+ N G V+ + + V+ Sbjct: 438 RIIGKTDAGLPTDRQADMLRPEGSRIIE-EGKPEVMEQWVTNVQTGKRVFFDVIKAPVKT 496 Query: 400 TDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMF 459 DG + + DI K E+ Q L + I K I + + Sbjct: 497 PDGRLIGVLGIARDITRRKEDEEKLQLAA----LVYKNSSEAILITNAKNEILAVNPAFE 552 Query: 460 ELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRA- 518 + P +D + K + D+L + ++ E K+G ++ Sbjct: 553 RITGYTPAEIMGKDPKILSSGRQD-KAFYKAMWDALGKKGFWRGELWNRKKNGEVYLAWL 611 Query: 519 LANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDM-AMKI 577 N V N++G V + ++ D TE K+ + ++++ L + + +D +I Sbjct: 612 TINVVYNEDGSVRYYVELSNDFTEKKEAEDMIWRQANF--DFLTGLPNRRMLLDRLQQEI 669 Query: 578 TFMNPVAEKM 587 +N +K+ Sbjct: 670 VKVNQSGKKL 679 Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 46/334 (13%), Positives = 111/334 (33%), Gaps = 37/334 (11%) Query: 277 LLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLG 336 L+ + + + + + + + S+ + + + + L N A + G Sbjct: 501 LIGVLGIARDITRRKEDEEKLQ----LAALVYKNSSEAILITNAKNEILAVNPAFERITG 556 Query: 337 YSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSL 396 Y+ E+ G + L+ + + + G+ + E +NG+V A L +++ Sbjct: 557 YTPAEIMGKDPKILSSGRQDKAFYKAMWDAL-GKKGFWRGELWNRKKNGEVYLAWLTINV 615 Query: 397 VRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDK 456 V + DG+ Y++ D E K E + + L + + L+ I ++ Sbjct: 616 VYNEDGSVRYYVELSNDFTEKKEAEDMIWRQANFDFLTGLPNRRMLLD-RLQQEIVKVNQ 674 Query: 457 R-------MFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITV 509 +L + +L + + +R+ EF + + Sbjct: 675 SGKKLALLFLDLDNFKDVNDTLGHDMGDLLLVDVAGRLNECVREIDTVSRLGGDEFAVIL 734 Query: 510 KD--GIRHIRALANRVLNKEGEVERLLG----INMDM-------------TEVKQLNEAL 550 + +R + +L + RL G ++ + T K ++AL Sbjct: 735 TELSDLRIAETVTQCMLRSLAQPYRLDGEIAYLSASIGMTVYPDDGTGIETLQKNADQAL 794 Query: 551 FQEKE--RLHITLDSIGEAVVCIDMAMKITFMNP 582 + K+ R ++ + + +I N Sbjct: 795 YAAKQAGRNRMSYFTAS---MQAAAQNRIRLAND 825 >UniRef50_A4G3M6 Putative two-component response regulator n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G3M6_HERAR Length = 818 Score = 826 bits (2135), Expect = 0.0, Method: Composition-based stats. Identities = 145/706 (20%), Positives = 278/706 (39%), Gaps = 23/706 (3%) Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELY 462 + +E + +R E + E + + + + + + Sbjct: 113 AVTRAMEHVEQRDARRRIETELLESNLMFRTFMENLPGAAFIKDQDGRYLYCNHGLDKAF 172 Query: 463 EIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANR 522 + ++ E V E ++ L++ + + +++ G + + Sbjct: 173 NVEKGCSIG-KLDTELVPLEVAYKLREMEARVLKAGTALQELEVMSMPSGASYWLSTKFP 231 Query: 523 VLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCID---MAMKITF 579 ++ + + + + GI +D+TE ++ + L +++ +V +D M + + Sbjct: 232 LVGENSDSQHVGGIAIDITERMKVEQDLLLRTR----AIEACVNPIVIVDTATPGMPLIY 287 Query: 580 MNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSG 639 +N E ++G++ EEA+G + + + P + + +A + + + + G Sbjct: 288 VNGAFETITGYSSEEAIGRNCKFLQGMD--TDQPELGKLRAAIREQRPASVLLRNYHKDG 345 Query: 640 GSYDVHYSITPLST-LDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEK 698 + I P+S G+ V V+ DVT+ ++ L + A++D LT LANR + Sbjct: 346 SMFLNELYIAPVSDTSGGAVGHFVGVLYDVTQIKRYQEDLEHQANYDTLTGLANRNLLNE 405 Query: 699 QLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLA 758 + + L +LVFIDLD FK VNDS GH AGD L+ + S + + +R D +A Sbjct: 406 RTQQALLQARRHDHFLSLVFIDLDNFKLVNDSMGHGAGDELIANVGSRLQTCVRDGDTVA 465 Query: 759 RLGGDEFGLLLPDCNVESA-RFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQ 817 R+GGDEF LLL + +V + + RI + + G+ V S G+ ++ Sbjct: 466 RIGGDEFVLLLTNQSVSDSNAGVMQRIQAELIK-PMWIRGQEIVVTCSMGVARFPEDGED 524 Query: 818 AAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHG 877 + +++ AD A Y +K+ GR Y + A ER ++ D W +K ++L ++ Sbjct: 525 SESLLANADTAMYRAKSSGRNNFQFYTKEMNATSGERLSLESDL-WHALKNDELFLVYQP 583 Query: 878 VASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAK 936 R + + + +L W + +I F L + V + + Sbjct: 584 QIDLR--DGTVIGMEALIRWQHPKRGLIAPMDFIPMAECNGLIIPIGIWVLETACRHNLQ 641 Query: 937 AV--ASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE--- 991 I +++ LS LS V + +E L P L L + ++ + E Sbjct: 642 LQKEGLPPIRVAINLSARQLSDRNFVESVQSVIEAIGLDPHYLELEVTESMVMHNVEDVV 701 Query: 992 -SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQ 1050 ++ L G ++ L G LK D L +D N + D ++ I Sbjct: 702 VTLNDLNKMGIQLSLDDFGTGFSSLAYLKRFPIDRLKIDQSFIFNCDSDPGDAIIAQTII 761 Query: 1051 GHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 A L +K IA V + L G D G I+ D L Sbjct: 762 ALAHGLKIKVIAEGVEKSEHLSFLKKNGCDEGQGYFISRPLTFDDL 807 Score = 103 bits (258), Expect = 4e-20, Method: Composition-based stats. Identities = 46/272 (16%), Positives = 86/272 (31%), Gaps = 16/272 (5%) Query: 289 AFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFL----GYSQEELRG 344 A R + ES FR ME + +G++L N L + G S G Sbjct: 126 ARRRIETELLESNLMFRTFMENLPGAAFIKDQDGRYLYCNHGLDKAFNVEKGCS----IG 181 Query: 345 LTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTP 404 +L E K + +++ +E +G W + + Sbjct: 182 KLDTELVPLEVAYKLREMEARVLKAGTALQELEVMSM-PSGASYWLS-TKFPLVGENSDS 239 Query: 405 LYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEW-ELKPNIFSWDKRMFELYE 463 + DI E + EQ I I I + + + + Sbjct: 240 QHVGGIAIDITERMKVEQDLLLRTRAIEA--CVNPIVIVDTATPGMPLIYVNGAFETITG 297 Query: 464 IPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRV 523 + + D+ K +R +++ + P + R KDG + L Sbjct: 298 YSSEEAIGRNCKFLQGMDTDQPELGK-LRAAIREQRPASVLLRNYHKDGSMFLNELYIAP 356 Query: 524 LNK--EGEVERLLGINMDMTEVKQLNEALFQE 553 ++ G V +G+ D+T++K+ E L + Sbjct: 357 VSDTSGGAVGHFVGVLYDVTQIKRYQEDLEHQ 388 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 53/394 (13%), Positives = 117/394 (29%), Gaps = 44/394 (11%) Query: 281 NIMTMVMYAFRAERKHISESETHFRN-AMEYSAIGMALVGTEGQ---WLQTNKALCQFLG 336 + + + + + R A+E + +V T + N A G Sbjct: 243 GGIAIDITERMKVEQDL-----LLRTRAIEACVNPIVIVDTATPGMPLIYVNGAFETITG 297 Query: 337 YSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSL 396 YS EE G + L + +L ++ I + S+ R Y+++G + L ++ Sbjct: 298 YSSEEAIGRNCKFLQGMDTDQPELGKLRAAIREQRPA-SVLLRNYHKDGSMFLNELYIAP 356 Query: 397 VRHTD-GTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWD 455 V T G +F+ + D+ ++KR ++ + TL A + E Sbjct: 357 VSDTSGGAVGHFVGVLYDVTQIKRYQEDLEHQANYDTLTGLANRNLL--NERTQQALLQA 414 Query: 456 KRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRH 515 +R + N+++ + + + LQ+ + + Sbjct: 415 RRHDHFLSLVFIDLDNFKLVNDSMGHGAGDELIANVGSRLQT-CVRDGDTVARIGGDEFV 473 Query: 516 IRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAM 575 + V + V + Q I + V Sbjct: 474 LLLTNQSVSDSNAGVM----------QRIQAELIKPMWIRGQEIVVTCSM-GVARFPEDG 522 Query: 576 KITFMNPVAEKMSGWTQEEALGVPLLTVLH--ITFGDNGPLM-ENIYSADTSRSAIEQDV 632 + E L + + +N + + + R ++E D+ Sbjct: 523 E--------------DSESLLANADTAMYRAKSSGRNNFQFYTKEMNATSGERLSLESDL 568 Query: 633 VLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQ 666 ++ + V+ L G+ IG +I+ Sbjct: 569 WHALKNDELFLVYQPQIDLRD--GTVIGMEALIR 600 >UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3H6_9PROT Length = 837 Score = 826 bits (2134), Expect = 0.0, Method: Composition-based stats. Identities = 115/575 (20%), Positives = 223/575 (38%), Gaps = 26/575 (4%) Query: 536 INMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEA 595 + + + KQ L + EA++ D I +N + ++G++ E+ Sbjct: 264 LKQQIEDRKQAENQL----RIAATAFE-THEAIMITDAHANIIRVNQAFQNITGYSPEDV 318 Query: 596 LGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLD 655 +G + + ++ + ++ ++G Y +IT + + Sbjct: 319 IGKNPRVL--SSGRQGSEFYAAMWKRLLGSGSWTGEIWDKRKNGEVYPKWLTITAVKDNE 376 Query: 656 GSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHA 715 G V + D+T + ++ A +D+LT L NR ++ ++ A Sbjct: 377 GVTTEYVAIFSDITLRKHAEEEIYTLAFYDSLTKLPNRRHLLDRINQARSISARSNHYGA 436 Query: 716 LVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE 775 L+F+D+DRFK +ND+ GH GD L E++ M + +R D +AR+GGDEF +L+ + + Sbjct: 437 LLFLDMDRFKILNDTLGHDYGDLFLVEVSRRMRNCVRDMDTVARIGGDEFVVLIEEIGTD 496 Query: 776 S------ARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIAC 829 + IA +I +A+ + ++ + + H S G+ L N ++ AD+A Sbjct: 497 NEEVSTKVALIAEKIRAALTE-PYLLKDKEHHSSPSIGVCLYLGNEESVDTLLRHADLAM 555 Query: 830 YASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNL 889 Y +K GR V ++P A RAA+ D + + QL + + R L Sbjct: 556 YQAKESGRNGVRFFDPAMQLAVETRAALEADMR-HAVTGKQLRLYYQIQL---TSDHRPL 611 Query: 890 WLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVAS---KGISI 945 +L W ++ F + +L + V +Q + + + Sbjct: 612 GAEALIRWMHPVRGLVSPAQFIPIAEESSLILEIGHWVLETACKQLVLWSKHERTRNLIL 671 Query: 946 SLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGC 1001 ++ +S + V+ + L L P L L + +L + L+ G Sbjct: 672 AINVSAQQFNKHDFVDTVSTLLHLHQLNPNRLKLELTESVVLSDVADVVSKMHALKALGV 731 Query: 1002 RIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTI 1061 ++ L G + LK D + +D ++V + D +++ I A M I Sbjct: 732 KLALDDFGTGYSSLSYLKQLPLDQIKIDRSFVSDVTTDPSDAVMVQTIINLAHNFRMNVI 791 Query: 1062 AGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 A V ++ L G G + P+D Sbjct: 792 AEGVETEDQLNFLKQNGCMAYQGFLFGKPMPIDEF 826 Score = 205 bits (523), Expect = 7e-51, Method: Composition-based stats. Identities = 73/503 (14%), Positives = 149/503 (29%), Gaps = 53/503 (10%) Query: 52 IMMVAFYRHAGRMWPGIALSCSLGNIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKL 111 I+MV + ALS G++ + L S +++ A+V +LLR Sbjct: 13 IVMVTVFGLG---LAIQALSLLAGDLDKHVFLRSLPVHGAIEMAGSVIAAMVAYLLLRLH 69 Query: 112 LPWYNPLQNLADWLRLALGSAIVPPLLGGVLVVLLTPGDDPLRAFLIWVLSESIGALALV 171 N A + G+ + D +L L+ + G L Sbjct: 70 AIGEGSSFNHQ--------IAAALLAMSGLDGLHAMMPDGESFVWLHS-LATAFGGLLFA 120 Query: 172 PLGLLFKPHYLLRHRNPRLLFESLLTLAI--TLTLSWLSMLYLPWPFTFIIVL------- 222 + L + P F + I L + + FT V+ Sbjct: 121 MIWLPGHWFKPVMRHWPLNAFLMAAAMGIYSILQPGQIPQMLASGQFTQAAVIMNIGGGL 180 Query: 223 -LMWSAVRLPRME---------------AFLIFLTTVMMVSLMMAADPSLLATPRTYLMS 266 L+ +AV+L L M S + R + Sbjct: 181 FLLLAAVKLFLTYRHSAKSEDLLFFFQCLILASAAITFMQSSIWDMPWWGWHMQRLAGYT 240 Query: 267 HMPWLPFLLI-------LLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVG 319 WL LL ++ + + + + A E + + + Sbjct: 241 LTLWLVVKTAKTIEGKTLLSNRLLKQQIEDRKQAENQLRIA----ATAFE-THEAIMITD 295 Query: 320 TEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKR 379 ++ N+A GYS E++ G + L+ ++ + K + G +++ E Sbjct: 296 AHANIIRVNQAFQNITGYSPEDVIGKNPRVLSSGRQGSEFYAAMWKRLLG-SGSWTGEIW 354 Query: 380 YYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGG 439 +NG+V L ++ V+ +G ++A DI K E+ L +L Sbjct: 355 DKRKNGEVYPKWLTITAVKDNEGVTTEYVAIFSDITLRKHAEEEIYTLAFYDSLTKLPNR 414 Query: 440 IGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSR- 498 + + S R + +++ + + + + +++ Sbjct: 415 RHL--LDRINQARSISARSNHYGALLFLDMDRFKILNDTLGHDYGDLFLVEVSRRMRNCV 472 Query: 499 SPFKLEFRITVKDGIRHIRALAN 521 RI + + I + Sbjct: 473 RDMDTVARIGGDEFVVLIEEIGT 495 >UniRef50_B1Y3M1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y3M1_LEPCP Length = 745 Score = 825 bits (2131), Expect = 0.0, Method: Composition-based stats. Identities = 146/698 (20%), Positives = 274/698 (39%), Gaps = 28/698 (4%) Query: 416 ELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVW 475 EL+R + + +R + +G + + I + +L + + Sbjct: 56 ELRRAQIALETARDRYIDLYDFAPVGYFTLDTNGLITEANLTGADLLGEARAKLVGRR-F 114 Query: 476 YECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLG 535 + P DR + + P ++E + G L + + L Sbjct: 115 ERYIAPVDRDRWHRHALSLSRRGEPGRIELLVQGAGGRSIHAQLDGLMARANHDAPLLRI 174 Query: 536 INMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEA 595 D++E K L + E ++ D I +N +M+G++ EA Sbjct: 175 ALTDISERKHAESEL----RLAATAFE-AQEGMMITDAHGVIERVNKAFTQMTGYSAAEA 229 Query: 596 LGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLD 655 +G + + + ++ + + +V + G Y +IT + Sbjct: 230 IGQTARLLH--SGRHDPAFYAAMWDSLQRTGTWQGEVWNRRKCGEVYAEWLTITAVQDEH 287 Query: 656 GSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHA 715 + V + D+++ + +++ A +D LT L NR + +L + + + A Sbjct: 288 RTVTRYVGTMLDISQRKAREEEIAQLAFYDPLTGLPNRRLLKDRLNQAMAISARSQREGA 347 Query: 716 LVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLL------ 769 L+FIDLD FK +ND+ GH GD LL+ +A + +R D +AR+GGDEF ++L Sbjct: 348 LLFIDLDHFKDINDTRGHDKGDLLLQNVAQRLSGCVREGDTVARIGGDEFVVMLGADLST 407 Query: 770 -PDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIA 828 D AR +A +I++A+N ++ G AS G+ L +D++ E++ +AD A Sbjct: 408 ATDEAASHARSVAEKILAALN-LPYLMSGEFVHCSASLGVALFNDHHDTVDELLKRADQA 466 Query: 829 CYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARN 888 Y +K GGR + ++ RAA+ + + ++ ++L++ V + R Sbjct: 467 MYQAKAGGRNTLRFFDTAVQQTMMLRAALEAELRL-AVQRDELVLCYQPVIDHQ---NRL 522 Query: 889 LWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK---GIS 944 L +L W ++ F D L A+ R V Q A A + Sbjct: 523 LGAEALVRWKHPRRGLVSPAEFIPIAEDRGLIQAIGRWVLETACTQLATWAADPATADLV 582 Query: 945 ISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAG 1000 +S+ +S L V ++E L + P L + + A+LDH + +++L+ G Sbjct: 583 LSVNVSARELHEPQFVERVIEILACTGARPARLKIELTENAVLDHVDDSIAKMKRLKAHG 642 Query: 1001 CRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKT 1060 R+ L G + LK D L +D ++ + D + I LG+ Sbjct: 643 IRLALDDFGTGHGSLSLLKRLPLDELKIDRTFVQDLLTDTHDAAIARTIAALGLNLGISV 702 Query: 1061 IAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 +A V P D L G + G++ L+ L Sbjct: 703 VAEGVETPAQRDLLIACGCRIFQGDLFGPPAALEALAR 740 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 40/298 (13%), Positives = 85/298 (28%), Gaps = 4/298 (1%) Query: 243 VMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESET 302 + +S L S L L+ + + + + +ESE Sbjct: 130 ALSLSRRGEPGRIELLVQGAGGRSIHAQLDGLMARANHDAPLLRIALTDISERKHAESEL 189 Query: 303 HFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQ 362 + GM + G + NKA Q GYS E G T + L Sbjct: 190 RLAATAFEAQEGMMITDAHGVIERVNKAFTQMTGYSAAEAIGQTARLLHSGRHDPAFYAA 249 Query: 363 VEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQ 422 + + T+ E + G+V L ++ V+ T ++ + DI++ K E+ Sbjct: 250 MWDSLQ-RTGTWQGEVWNRRKCGEVYAEWLTITAVQDEHRTVTRYVGTMLDISQRKAREE 308 Query: 423 VNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPE 482 QL L + + + R + +++ + + Sbjct: 309 EIAQLAFYDPLTGLPNRRLL--KDRLNQAMAISARSQREGALLFIDLDHFKDINDTRGHD 366 Query: 483 DRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDM 540 + + L S + + + + A+ + + + Sbjct: 367 KGDLLLQNVAQRL-SGCVREGDTVARIGGDEFVVMLGADLSTATDEAASHARSVAEKI 423 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 93/271 (34%), Gaps = 9/271 (3%) Query: 283 MTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEEL 342 + M R + + + + + +++ +G + T G + N LG ++ +L Sbjct: 50 LEMQNDELRRAQIALETARDRYIDLYDFAPVGYFTLDTNGLITEANLTGADLLGEARAKL 109 Query: 343 RGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDG 402 G F++ P D ++ + +S +E G + A L + R Sbjct: 110 VGRRFERYIAPVDRDRWHRH-ALSLSRRGEPGRIELLVQGAGGRSIHAQLDGLMARANHD 168 Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELY 462 PL IA + DI+E K E R+ G+ + I +K ++ Sbjct: 169 APLLRIA-LTDISERKHAESEL-----RLAATAFEAQEGMMITDAHGVIERVNKAFTQMT 222 Query: 463 EIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANR 522 D + DSLQ ++ E K G + L Sbjct: 223 GYSAAEAIGQTARLLHSGRHD-PAFYAAMWDSLQRTGTWQGEVWNRRKCGEVYAEWLTIT 281 Query: 523 -VLNKEGEVERLLGINMDMTEVKQLNEALFQ 552 V ++ V R +G +D+++ K E + Q Sbjct: 282 AVQDEHRTVTRYVGTMLDISQRKAREEEIAQ 312 >UniRef50_C6X7I8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7I8_METSD Length = 821 Score = 825 bits (2131), Expect = 0.0, Method: Composition-based stats. Identities = 150/692 (21%), Positives = 281/692 (40%), Gaps = 23/692 (3%) Query: 417 LKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWY 476 KR E+ + + + + + + + + ++P Sbjct: 127 HKRMERELENSNRLFRVFMQNLPAIAFIKDQQGQYIFANASTVDALQLPHEQIIGKHD-T 185 Query: 477 ECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGI 536 P+ Q + +L + + + D ++ V + +G + GI Sbjct: 186 LLFPPQLAQEMRAAEQQTLAQGEAIQHVRQFPLADDVKLWLLTTFPVQDMDGNFNHIGGI 245 Query: 537 NMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCID---MAMKITFMNPVAEKMSGWTQE 593 +D+TE ++ EAL +++ ++ +D AM + ++N E ++G++ + Sbjct: 246 GIDITEQRKAEEALLLRNH----AIEASATPILIVDVTQPAMPLIYVNRAFELVTGYSSQ 301 Query: 594 EALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLST 653 EA+G + P +E I +A R + + + G + + P+ Sbjct: 302 EAVGRNCRFLQG--HDREQPELEKIRTAIRERCPGYAILRNYRKDGSLFWNELYVAPVPD 359 Query: 654 LDG-SNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQ 712 G V V +D+TE R+ L A++D LT LANR +++++ + + Sbjct: 360 PHGGEPRYFVGVQKDITEIRQYQEALERQANYDTLTGLANRNLLKERMQQAISEARRHNW 419 Query: 713 RHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC 772 ++ FID+D FK VNDS GH+AGD L+R L + S LR D +ARLGGDEF LLL Sbjct: 420 TFSVAFIDIDNFKRVNDSMGHSAGDELIRLLGQRLQSCLRDGDTVARLGGDEFVLLLTSQ 479 Query: 773 NVESARF-IATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYA 831 +++ + + RI + + FI GR V S G+ + A ++S AD A Y Sbjct: 480 SLDESIHTVVQRIRNTII-NPFIITGRQLTVTCSIGLANFPHDGRNADTLLSNADSAMYQ 538 Query: 832 SKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWL 891 +K G Y + A R ++ D W ++ QL++ R ++ + + Sbjct: 539 AKASGSNNFRFYAKEMNAELGHRLSLENDL-WHALENQQLVLHYQPQVCMR--NSQIIGM 595 Query: 892 ISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV--ASKGISISLP 948 +L W + +I F D L + V Q + I +++ Sbjct: 596 EALIRWQHPKLGMIPPLQFIPLSEDDGLIVPIGIWVMETAAHQNRQLQLAGYPPIRVAVN 655 Query: 949 LSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIV 1004 LSV L LV+ + + L++S L P+ L L I ++ + E ++ ++ G ++ Sbjct: 656 LSVRQLEQKDLVHCIEKTLQHSGLDPQCLELEITESMLMHNIEESIITLNRISDLGVQLS 715 Query: 1005 LSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGP 1064 L G + LK + L +D ++ D ++ I A L ++ IA Sbjct: 716 LDDFGTGYSSLSYLKRLPINRLKIDKSFINDITTTYNDAIIARSIIALAHSLEIQVIAEG 775 Query: 1065 VVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 V L G D + G +++ +P + + Sbjct: 776 VESADQYAFLLENGCDEVQGYLLSRPRPFEEM 807 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 47/283 (16%), Positives = 95/283 (33%), Gaps = 12/283 (4%) Query: 276 ILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFL 335 + A + + + S FR M+ + +GQ++ N + L Sbjct: 113 AVTSALERAEEKIMHKRMERELENSNRLFRVFMQNLPAIAFIKDQQGQYIFANASTVDAL 172 Query: 336 GYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVS 395 E++ G L P+ + ++ ++ + +++ + +W L Sbjct: 173 QLPHEQIIGKHDTLLFPPQLAQEMRAAEQQTLA-QGEAIQHVRQFPLADDVKLWLLTT-F 230 Query: 396 LVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWE---LKPNIF 452 V+ DG + DI E ++ E+ A EA I + + Sbjct: 231 PVQDMDGNFNHIGGIGIDITEQRKAEEALL----LRNHAIEASATPILIVDVTQPAMPLI 286 Query: 453 SWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG 512 ++ + + ++ EK IR +++ R P R KDG Sbjct: 287 YVNRAFELVTGYSSQEAVGRNCRFLQGHDREQPELEK-IRTAIRERCPGYAILRNYRKDG 345 Query: 513 IRHI-RALANRVLNKE-GEVERLLGINMDMTEVKQLNEALFQE 553 V + GE +G+ D+TE++Q EAL ++ Sbjct: 346 SLFWNELYVAPVPDPHGGEPRYFVGVQKDITEIRQYQEALERQ 388 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 69/168 (41%), Gaps = 11/168 (6%) Query: 280 ANIMTMVMYAFRAERKHISESETHFRN-AMEYSAIGMALVG---TEGQWLQTNKALCQFL 335 + + + R + + RN A+E SA + +V + N+A Sbjct: 242 IGGIGIDITEQRKAEEAL-----LLRNHAIEASATPILIVDVTQPAMPLIYVNRAFELVT 296 Query: 336 GYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVS 395 GYS +E G + L + +L+++ I Y++ R Y ++G + W L V+ Sbjct: 297 GYSSQEAVGRNCRFLQGHDREQPELEKIRTAIRERCPGYAI-LRNYRKDGSLFWNELYVA 355 Query: 396 LVRHTD-GTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGI 442 V G P YF+ +DI E+++ ++ ++ TL A + Sbjct: 356 PVPDPHGGEPRYFVGVQKDITEIRQYQEALERQANYDTLTGLANRNLL 403 >UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4Q9_AZOSE Length = 813 Score = 824 bits (2130), Expect = 0.0, Method: Composition-based stats. Identities = 149/706 (21%), Positives = 267/706 (37%), Gaps = 41/706 (5%) Query: 414 INELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPN-- 471 I E Q + ++ + + + + + ++ L + PPH+ Sbjct: 111 IAADNSGENEVVQRAAMLETILDSIPCAVSLVDRELQLVACNEEFKRLLDFPPHLFAGSL 170 Query: 472 --------WQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRV 523 + P D + +P E R + I+ Sbjct: 171 PSLETLFRYNAARGEYGPGDPDEVVASLLARALHPAPHSFE-RRRRDGTVLLIQGRPLP- 228 Query: 524 LNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPV 583 + D+T K+ E L + ++ EA+V D+ +I +NP Sbjct: 229 ------QGGFVTTYTDITARKRDKERL----QLADKVFENSREAIVITDLGHRIVSVNPA 278 Query: 584 AEKMSGWTQEEALGVPLL------TVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCR 637 +++G A G G GP +++ + + Sbjct: 279 YTEITGIAATAAQGTCFRPGSDDGDSGEEGEGAGGPDSRTVWAIVGEHGSWSGETTGVRC 338 Query: 638 SGGSYDVHYSITPLSTLD-GSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASF 696 G Y I + + + + D+T ++ + + A HD LT LANR S Sbjct: 339 GGQRYPRTLMINGVRDPETREITHFIAIFSDITARKRAEADIQHLAYHDTLTGLANRFSL 398 Query: 697 EKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDV 756 +L++ + QR A++F+DLDRFK +NDS GH GD LL+++A + +R +D Sbjct: 399 TARLQLSVAEARRNGQRLAVMFLDLDRFKHINDSLGHPVGDELLKQVARRLRDAVRETDT 458 Query: 757 LARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNN 815 +ARLGGDEF ++L +A ++++ ++ + + AS GI+L D++ Sbjct: 459 VARLGGDEFVVVLQGIGGAHDVTHVAAKLLAQLSA-PYCVDTTELHTTASIGISLFPDDS 517 Query: 816 HQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLA 875 A +M AD A Y +K GR + Y + A + R + + + + + Sbjct: 518 ADPAALMRNADTAMYHAKAAGRAKFQFYTDEMNRAATARLDLERKLRG-AVARGEFELWY 576 Query: 876 HGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQA 934 R L +L W + +I F + + + V E +QA Sbjct: 577 QPQFDSR--HGHLTGLEALVRWRHPQDGLIAPLRFIPLAEETGVIVEIGTWVLREACRQA 634 Query: 935 AKA--VASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES 992 + + IS+ LSV L LV+ + L S L P LL L I A++D+ + Sbjct: 635 RQWLDAGLPELRISVNLSVRQLREKCLVDTVWTTLAASGLRPGLLELEITESAVMDNPDE 694 Query: 993 ----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITI 1048 +Q L+ G RI + G + LK D+L +D ++++ + D M++ Sbjct: 695 AVALLQALKNLGVRIAIDDFGTGHSSLSYLKLFPLDHLKIDRSFISDIEHDANDTMIVAA 754 Query: 1049 IQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLD 1094 A LG+ IA V + + L +G D + G + D Sbjct: 755 AVSLAHNLGLSVIAEGVESAVQVARLRELGCDELQGFHFSRPVTAD 800 Score = 99.0 bits (246), Expect = 1e-18, Method: Composition-based stats. Identities = 39/242 (16%), Positives = 77/242 (31%), Gaps = 13/242 (5%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQ--- 348 RK E E S + + + + N A + G + +G F+ Sbjct: 240 TARKRDKERLQLADKVFENSREAIVITDLGHRIVSVNPAYTEITGIAATAAQGTCFRPGS 299 Query: 349 -----QLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTD-G 402 D + V ++ GE ++S E G L ++ VR + Sbjct: 300 DDGDSGEEGEGAGGPDSRTVWAIV-GEHGSWSGETTGVRCGGQRYPRTLMINGVRDPETR 358 Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELY 462 +FIA DI KR E Q L TL A + L+ ++ +R + Sbjct: 359 EITHFIAIFSDITARKRAEADIQHLAYHDTLTGLANRFSL-TARLQLSVAEA-RRNGQRL 416 Query: 463 EIPPHIKPNWQVWYECV-LPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALAN 521 + ++ + + P + ++V R + R+ + + ++ + Sbjct: 417 AVMFLDLDRFKHINDSLGHPVGDELLKQVARRLRDAVRETDTVARLGGDEFVVVLQGIGG 476 Query: 522 RV 523 Sbjct: 477 AH 478 Score = 90.5 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 36/279 (12%), Positives = 75/279 (26%), Gaps = 36/279 (12%) Query: 294 RKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGL--TFQQLT 351 + + ++ ++LV E Q + N+ + L + G + + L Sbjct: 118 ENEVVQRAAMLETILDSIPCAVSLVDRELQLVACNEEFKRLLDFPPHLFAGSLPSLETLF 177 Query: 352 ----------WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTD 401 + + + + +++ R+G V L+ + Sbjct: 178 RYNAARGEYGPGDPDEVVASLLARALHPAPHSFER----RRRDGTV--LLIQGRPLPQG- 230 Query: 402 GTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFEL 461 F+ DI KR ++ Q + E I +L I S + E+ Sbjct: 231 ----GFVTTYTDITARKRDKERLQLADK----VFENSREAIVITDLGHRIVSVNPAYTEI 282 Query: 462 YEIPPHIKPN--------WQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGI 513 I E + V + S + Sbjct: 283 TGIAATAAQGTCFRPGSDDGDSGEEGEGAGGPDSRTVWAIVGEHGSWSGETTGVRCGGQR 342 Query: 514 RHIRALANRVLNKE-GEVERLLGINMDMTEVKQLNEALF 551 + N V + E E+ + I D+T K+ + Sbjct: 343 YPRTLMINGVRDPETREITHFIAIFSDITARKRAEADIQ 381 >UniRef50_A4Y0Z3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=13 Tax=Pseudomonas RepID=A4Y0Z3_PSEMY Length = 960 Score = 824 bits (2130), Expect = 0.0, Method: Composition-based stats. Identities = 182/935 (19%), Positives = 353/935 (37%), Gaps = 86/935 (9%) Query: 176 LFKPHYLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEA 235 P R +TL + + ++ + +V + +A L Sbjct: 89 AALPSRQAESYWRRNFLFGAGASGLTLAFAVIVLVPPDVFYQQALVYGLIAAAILS---- 144 Query: 236 FLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERK 295 V + + + A P LL + L+S +L + +++ A++ Sbjct: 145 -ASVAYAVSLSAFLTFALPCLLPSAAFLLLSDNSLQRGWGLLSVILFLALLVVAWQ---- 199 Query: 296 HISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPED 355 N+ L + Q + Sbjct: 200 -------------------------------VNR------------LVQRSLLQRFHNQA 216 Query: 356 LNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDIN 415 L +L+ ++ G + E R +R G + E Sbjct: 217 LIANLEHAKQRAEGLNEELAREVEQRRRAERE---------LRGAHGELE--MRVAERTL 265 Query: 416 ELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNW-QV 474 EL + R+ LA EA +G+W+W+L+ + + EL+ + P + Sbjct: 266 ELDEATHALGKSQARLALALEASELGLWDWDLESDQVHHS-HLRELFGLEPEQVQVMLRD 324 Query: 475 WYECVLPEDRQHAEKVIRDSLQSR-SPFKLEFRITVKDGIRHIRALANR--VLNKEGEVE 531 + P+D + + + ++ R +++E+R+ DG R + G V Sbjct: 325 LTPRLHPDDLPRLRRALVEHMKGRSEDYQIEYRVRHVDGHWVWVEDRGRAVERDAAGRVR 384 Query: 532 RLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWT 591 R+LG D++ +Q + + ++ E + +D ++ +N ++G++ Sbjct: 385 RMLGTRRDVSARRQQEQE----QRLAATVFEAASEGIFILDPDYRVLAVNRAFSAVTGYS 440 Query: 592 QEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPL 651 +EE +G + +++ + + I + + +++ +SG Y + + Sbjct: 441 REEVVGRTVTSLIGS--REMRRQYQMIRQELDGSGSWQGELIETRKSGELYPQWLQLNLV 498 Query: 652 STLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTH 711 G V D+T R+ +L Y + +D LT LANR+ F+++L Q + Sbjct: 499 RDASGRPSHIVGFFADLTARREAEERLRYLSHYDELTGLANRSLFKERLHEASQRARQSG 558 Query: 712 QRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD 771 + ALV IDLDRFK +NDS GH D LLR+++ + + +D +ARL GDEF +LL Sbjct: 559 RSIALVHIDLDRFKLLNDSLGHEVADQLLRQMSRRLTQAVPEADCIARLSGDEFAILLDA 618 Query: 772 C-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACY 830 ++ S +A+R+++ + G V AS GI+L+ D + ++SQA++A Sbjct: 619 YGSLSSLARVASRLLAKL-RLPMDVGGHELVVSASLGISLLPDYAREIGALISQANMAVQ 677 Query: 831 ASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLW 890 +K+ G + A ER + + + I+E QL + + + + Sbjct: 678 HAKHLGGNTFQFFTDNLQACTLERLQLENQLR-KAIEEGQLEVFYQPK--LNLADDQLNA 734 Query: 891 LISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK--GISISL 947 +L W + ++ F + L + V + +QA + I +S+ Sbjct: 735 AEALVRWRHPQQGLVAPGEFIGLAEETGLIAPIGEFVLRQACRQARQWQQQGLAEIRVSV 794 Query: 948 PLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESV----QKLRLAGCRI 1003 +SV L L + + + LE + L P+ L L + +LD+ +SV ++LR G ++ Sbjct: 795 NISVYQLRQGNLTSLVRQVLEETGLAPQYLELELTESQLLDNVDSVVVTFRQLRELGVKL 854 Query: 1004 VLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAG 1063 + G + LK Y+ +D ++ D + I A L +K +A Sbjct: 855 AIDDFGTGYSSLSYLKRFPVHYVKIDQTFIRDLSPGGEDAAITRAIIAMAHSLELKVVAE 914 Query: 1064 PVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 V MD L D I G +I+ Sbjct: 915 GVETQAQMDFLKSQNCDEIQGYLISRPVEAAAFAE 949 Score = 155 bits (393), Expect = 8e-36, Method: Composition-based stats. Identities = 68/501 (13%), Positives = 151/501 (30%), Gaps = 84/501 (16%) Query: 126 RLALGSAIVPPLLGGVLVVLLT----------------------------------PGDD 151 RL + +P LL ++ + + Sbjct: 33 RLLYQGSRLPTLLMLLVGLACSLLLWREGSAPLLAGWLAWVLLLVLLRLTQVNAFNAALP 92 Query: 152 PLRAFLIWVLSESIGA-LALVPLGLLFKPHYLLRHRNPRLLFESLLTLAITLTLSWLSML 210 +A W + GA + + L + L L+ AI ++ Sbjct: 93 SRQAESYWRRNFLFGAGASGLTLAFAVIVLVPPDVFYQQALVYGLIAAAILSASVAYAVS 152 Query: 211 YLPWPFTFIIVLLMWSAVRL-----PRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLM 265 + + LL +A L + L+ + + + ++ L+ Sbjct: 153 LSAFLTFALPCLLPSAAFLLLSDNSLQRGWGLLSVILFLALLVVAWQVNRLVQRSLLQRF 212 Query: 266 SHMPWLPFL-----LILLPANIMTMVMYAFRAERKHIS---------------------- 298 + + L + + R + + Sbjct: 213 HNQALIANLEHAKQRAEGLNEELAREVEQRRRAERELRGAHGELEMRVAERTLELDEATH 272 Query: 299 ---ESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQL---TW 352 +S+ A+E S +G+ E + + L + G E+++ + + L Sbjct: 273 ALGKSQARLALALEASELGLWDWDLESDQVHHSH-LRELFGLEPEQVQ-VMLRDLTPRLH 330 Query: 353 PEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLV-RHTDGTPLYFIAQI 411 P+DL + + + + + G Y +E R + +G VW V R G + Sbjct: 331 PDDLPRLRRALVEHMKGRSEDYQIEYRVRHVDGHWVWVEDRGRAVERDAAGRVRRMLGTR 390 Query: 412 EDINELKRTEQVNQQLMERITLA-NEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKP 470 D++ ++ Q+ +R+ EA GI+ + + + ++ + Sbjct: 391 RDVSARRQ-----QEQEQRLAATVFEAASEGIFILDPDYRVLAVNRAFSAVTGYSREEVV 445 Query: 471 NWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRA-LANRVLNKEGE 529 V + + + ++IR L ++ E T K G + + N V + G Sbjct: 446 GRTV-TSLIGSREMRRQYQMIRQELDGSGSWQGELIETRKSGELYPQWLQLNLVRDASGR 504 Query: 530 VERLLGINMDMTEVKQLNEAL 550 ++G D+T ++ E L Sbjct: 505 PSHIVGFFADLTARREAEERL 525 >UniRef50_Q2W4Z4 Predicted signal transduction protein containing a membrane domain n=4 Tax=Magnetospirillum RepID=Q2W4Z4_MAGSA Length = 831 Score = 824 bits (2129), Expect = 0.0, Method: Composition-based stats. Identities = 137/592 (23%), Positives = 248/592 (41%), Gaps = 14/592 (2%) Query: 511 DGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVC 570 I+A+++ G V +L I +E + EA + Sbjct: 230 GQAIRIQAISHGAFWLVG-VAGILLIGRRSAGRLTEKALADEETRLAAHVFSNALEATLI 288 Query: 571 IDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQ 630 D +I +NP+ +++G+ + E +G + + + I+ A + Sbjct: 289 TDPKGRILRINPMFTELTGYGEAEVVGGNPRIIR--SNHHDADFYAEIWQAIFRDGRWQG 346 Query: 631 DVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHL 690 ++ + G + SI + G+ + +D+TE + R + A +D LT L Sbjct: 347 EIWNRRKDGQVFVAWESIVAVYDEAGAIRYFIGSFRDITEQVEAQRHILRLAHYDVLTDL 406 Query: 691 ANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSM 750 NR F+ +L + ++ AL+F+DLD FK VND+ GH AGD LL+E+A + Sbjct: 407 PNRVLFQDRLERAVVHALRHDRQAALLFLDLDGFKKVNDTMGHRAGDDLLKEVAVRLRGC 466 Query: 751 LRSSDVLARLGGDEFGLLLPDCN-VESARFIATRIISAVNDYHFIWEGRVHRVGASAGIT 809 +R +D +ARLGGDEF ++L + + A +A +I+++++ F +GR +G S GI+ Sbjct: 467 VRMTDTIARLGGDEFTVILDEISAANDASMVADKILASLHAPIF-IDGRDVFIGTSIGIS 525 Query: 810 LIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKEN 869 L + E++ AD A Y +K G+GR Y + R + + + ++E Sbjct: 526 LFPIDGTSGDELLKHADTAMYQAKAAGKGRFNFYSAEMTKREEHRLELETALR-QAVEEG 584 Query: 870 QLMMLAHGVASPRIPEARNLWLISLKLWSCEG-EIIDEQTFRRSFSDPALSHALDRRVFH 928 Q + + R +L W +I F + L +D V Sbjct: 585 QFQVHYQPQ--KNLATNRVSGFEALVRWQHPRLGMISPVDFIPLAEEMHLIDRIDMFVMR 642 Query: 929 EFFQQAAKAVASK-GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAIL 987 + ++ + I +++ LS S L + + LE++ P L L I ++ Sbjct: 643 QACRKGRQWRDQGYDICMAVNLSGVNFSRDDLPEQVRQVLEDTGFPAENLELEITESFVI 702 Query: 988 ----DHAESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDE 1043 D E +Q+LR G ++ + G + LK + L +D ++ + D Sbjct: 703 DLEVDQREVLQRLRALGVKLAIDDFGTGYSSLSYLKRLPVNTLKIDRSFVRDIARDSRDM 762 Query: 1044 MLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDL 1095 ML++ I G A LG+K +A + + L D I G +IA P + Sbjct: 763 MLVSSIIGIAHSLGLKVVAEGIEERDQLAILLSQECDEIQGYLIAKPMPAEQ 814 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 31/199 (15%), Positives = 66/199 (33%), Gaps = 2/199 (1%) Query: 245 MVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHF 304 V + + P + + + F L+ + ++ A R K +++ ET Sbjct: 215 AVGVSVPMQPYQAMEGQAIRIQAISHGAFWLVGVAGILLIGRRSAGRLTEKALADEETRL 274 Query: 305 RN-AMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQV 363 + + +G+ L+ N + GY + E+ G + + ++ Sbjct: 275 AAHVFSNALEATLITDPKGRILRINPMFTELTGYGEAEVVGGNPRIIRSNHHDADFYAEI 334 Query: 364 EKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQV 423 + I + E ++G V A ++ V G YFI DI E ++ Sbjct: 335 WQAI-FRDGRWQGEIWNRRKDGQVFVAWESIVAVYDEAGAIRYFIGSFRDITEQVEAQRH 393 Query: 424 NQQLMERITLANEAGGIGI 442 +L L + + Sbjct: 394 ILRLAHYDVLTDLPNRVLF 412 Score = 71.6 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 20/165 (12%), Positives = 45/165 (27%), Gaps = 5/165 (3%) Query: 392 LAVSLVRHTDGTPLYFIAQIE--DINELKRTEQVNQQLMERITL-ANEAGGIGIWEWELK 448 + + + H + + + + TE+ R+ + K Sbjct: 233 IRIQAISHGAFWLVGVAGILLIGRRSAGRLTEKALADEETRLAAHVFSNALEATLITDPK 292 Query: 449 PNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRIT 508 I + EL D I ++ ++ E Sbjct: 293 GRILRINPMFTELTGYGEAEVVGGNPRIIRSNHHDAD-FYAEIWQAIFRDGRWQGEIWNR 351 Query: 509 VKDGIRHIRALANR-VLNKEGEVERLLGINMDMTEVKQLNEALFQ 552 KDG + + V ++ G + +G D+TE + + + Sbjct: 352 RKDGQVFVAWESIVAVYDEAGAIRYFIGSFRDITEQVEAQRHILR 396 >UniRef50_A3JAM8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter sp. ELB17 RepID=A3JAM8_9ALTE Length = 756 Score = 824 bits (2129), Expect = 0.0, Method: Composition-based stats. Identities = 160/759 (21%), Positives = 312/759 (41%), Gaps = 35/759 (4%) Query: 363 VEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQ 422 ++K +G +++++ Y ++G W +A + +G IA DI + KR Sbjct: 1 MQKATAGRK-SFNVDVINYTKSGTPYWVRIACDPLWDNNGQFKGCIAIETDITKEKRDAD 59 Query: 423 VNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKP--NWQVWYECVL 480 + E + A IG W L+ + +++ L H + + W Sbjct: 60 LISYNEEMLKSVINANNIGTWRLNLQSGELTINEKWAHLLGYKLHELMPTDRKTWENLTH 119 Query: 481 PEDRQHAEKVIRDSLQSRSP-FKLEFRITVKDGIRHIRALANRVLN--KEGEVERLLGIN 537 PED + + + P ++ + R+ K+G +VL+ ++G+ E L+G + Sbjct: 120 PEDLAYCISELEKHSMGQVPAYEADIRMKHKNGEWVWINTRGQVLSSTEDGKTEWLIGTH 179 Query: 538 MDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALG 597 D+ + ++ +++H ++S+ + VV I I N AE + + ++EA+G Sbjct: 180 FDINDRITAQRKSNEQSKQMHAIVESMQDGVVTISNKGVIRTFNRGAECIFEYGRDEAIG 239 Query: 598 VPLLTVLHITFGDNGPLMENIYSADTSRSAIE--QDVVLHCRSGGSYDVHYSIT---PLS 652 + + +++ D + Y + + +AI+ ++ + G + + +T PL Sbjct: 240 LDVNVLINTPNRDYLNKYISNYISRNTGNAIQRYHELDAINKYGTVFPIEIGMTQMPPLG 299 Query: 653 TLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQ 712 +D V++++D+T+ +K ++ A +D LT L NR + +L+ ++ + Sbjct: 300 DID-----FVVIVRDITQRKKREDEIRQLAYYDPLTRLPNRRLLKDRLQQVIANCGRQSR 354 Query: 713 RHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC 772 AL F+DLD FK +NDS G GD LL ++A+ ++ +R D ++RLGGDEF +L+ Sbjct: 355 YAALFFLDLDNFKNLNDSLGRTKGDLLLCQVAARLIESVRHGDTVSRLGGDEFVVLIEGL 414 Query: 773 NVES------ARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQAD 826 + + A +I + F +G + AS G+T + N+ +++ QAD Sbjct: 415 SSDRNEAAVQVEAAAGKINVQLTQK-FDLDGSPYNGSASIGVTTFNSNDSSLEDLLKQAD 473 Query: 827 IACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEA 886 +A Y +K V ++PQ S RAAM D + +++NQ + Sbjct: 474 MALYKAKAADHSSVHFFDPQMQVVASLRAAMQQDL-YEALRKNQFQLHYQKQIDQHEG-- 530 Query: 887 RNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK---G 942 + + +L W I F + L + V E Q A+ + Sbjct: 531 -LIGVEALLRWAHPTKGFISPAQFIPLAEETGLIVPIGEWVLREACQTLAQWASDPAKAN 589 Query: 943 ISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRL 998 ++I++ +SV + +V+ +L L S P L L I + E + +L+ Sbjct: 590 LTIAVNISVVQFNKKDIVHTVLNALNASGAKPHNLKLEITESLLASDVENVKVKMLELQR 649 Query: 999 AGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGM 1058 G + G LK L +D ++ + D+ + + A + + Sbjct: 650 HGVTFSIDDFGTGYSSLFYLKQLPLHQLKIDQSFVRDIINSPNDQAIAQAVITLAIAMHL 709 Query: 1059 KTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLV 1097 IA V L +G G + L L Sbjct: 710 NVIAEGVETEAQRAMLQDLGCGAYQGYLFGKPCALQDLF 748 Score = 132 bits (333), Expect = 8e-29, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 110/279 (39%), Gaps = 10/279 (3%) Query: 282 IMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEE 341 + + + + IS +E ++ + + IG + + L N+ LGY E Sbjct: 46 AIETDITKEKRDADLISYNEEMLKSVINANNIGTWRLNLQSGELTINEKWAHLLGYKLHE 105 Query: 342 LR---GLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLV- 397 L T++ LT PEDL + ++EK G++ Y + R ++NG+ VW ++ Sbjct: 106 LMPTDRKTWENLTHPEDLAYCISELEKHSMGQVPAYEADIRMKHKNGEWVWINTRGQVLS 165 Query: 398 RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKR 457 DG + I DIN+ ++ + + +++ E+ G+ K I ++++ Sbjct: 166 STEDGKTEWLIGTHFDINDRITAQRKSNEQSKQMHAIVESMQDGVVTISNKGVIRTFNRG 225 Query: 458 MFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSP----FKLEFRITVKDGI 513 ++E V P R + K I + + + E K G Sbjct: 226 AECIFEYGRDEAIGLDVNVLINTPN-RDYLNKYISNYISRNTGNAIQRYHELDAINKYGT 284 Query: 514 RHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQ 552 + + G+++ + I D+T+ K+ + + Q Sbjct: 285 VFPIEIGMTQMPPLGDID-FVVIVRDITQRKKREDEIRQ 322 Score = 80.1 bits (197), Expect = 5e-13, Method: Composition-based stats. Identities = 30/238 (12%), Positives = 66/238 (27%), Gaps = 17/238 (7%) Query: 286 VMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGL 345 + ++ +E +E G+ + +G N+ Y ++E GL Sbjct: 181 DINDRITAQRKSNEQSKQMHAIVESMQDGVVTISNKGVIRTFNRGAECIFEYGRDEAIGL 240 Query: 346 TFQQLTWPEDLNKDLQQVEKLISGEIN---TYSMEKRYYNRNGDVVWALLAVS---LVRH 399 L + + + + IS E N+ G V + ++ + Sbjct: 241 DVNVLINTPNRDYLNKYISNYISRNTGNAIQRYHELDAINKYGTVFPIEIGMTQMPPLGD 300 Query: 400 TDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGI------WEWELKPNIFS 453 D F+ + DI + K+ E +QL L + Sbjct: 301 ID-----FVVIVRDITQRKKREDEIRQLAYYDPLTRLPNRRLLKDRLQQVIANCGRQSRY 355 Query: 454 WDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD 511 +L + + +L + + +R EF + ++ Sbjct: 356 AALFFLDLDNFKNLNDSLGRTKGDLLLCQVAARLIESVRHGDTVSRLGGDEFVVLIEG 413 >UniRef50_Q21WZ6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Betaproteobacteria RepID=Q21WZ6_RHOFD Length = 1355 Score = 823 bits (2128), Expect = 0.0, Method: Composition-based stats. Identities = 137/718 (19%), Positives = 261/718 (36%), Gaps = 26/718 (3%) Query: 396 LVRHTDGTPLYFIA-QIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSW 454 D + IA + I +R E + +R L + IW +LK Sbjct: 364 PYTEADVETVRLIADAVWRIVRQRRAETALHESEQRHRLLADNASDVIWTMDLKGRFTYV 423 Query: 455 DKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSP------FKLEFRIT 508 + +L Q + + P A + + S+ S + F+ E Sbjct: 424 SPSVEKLRGFTSAEVM-QQTLAQTLCPSSIPVATEALGKSMASMAAGLPFIGFRGELEQP 482 Query: 509 VKDG-IRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEA 567 KDG N + N++G+ ++G++ ++TE K + L E Sbjct: 483 CKDGSTVWTEISTNGMRNEQGDFVGIVGVSRNITERKAQQQQLQLAA----QVFAQGREG 538 Query: 568 VVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSA 627 + D I +N +++G+TQ E LG + + + ++++A T+ Sbjct: 539 ITVTDARGHIIMVNRAFSEITGYTQAEVLGQNPRILK--SERQSPEFYLDMWTALTTSGH 596 Query: 628 IEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDAL 687 ++ + G Y +I+ L G V D++ ++ ++ + + D L Sbjct: 597 WAGEMWNRKKDGTVYPEWMAISALRDSQGLTTHYVASFSDLSTAKAAESRIQWLSQFDTL 656 Query: 688 THLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLM 747 T L NR + + + L V + ++ + +D F AVND+ GH GD LL E+A + Sbjct: 657 TGLPNRTLLQDRTALALSMVQRAREPLTMLLVAIDHFGAVNDTLGHQLGDELLVEMARRL 716 Query: 748 LSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAG 807 +R D ++R+GG EF L+LP A +AT ++ ++ + AS G Sbjct: 717 SDSVREQDTVSRMGGKEFVLVLPGTPAMGAAHLATELLWKLSR-PCSLGMHELTLTASIG 775 Query: 808 ITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIK 867 I DN + +IA + ++ GR Y + + + I Sbjct: 776 IASFPDNGADFDTLFKAVEIAMHRAQLKGRDTYQFYSDDMYEQVLAHDRLIKALR-QAIV 834 Query: 868 ENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRV 926 +QL ++ + + + +L W E + F + L + V Sbjct: 835 LDQLQLVYQPQVDLQ--TGQICGVEALLRWQHPELGAVSPGQFIPLAEESGLIIGIGEWV 892 Query: 927 FHEFFQQAAKAVASK--GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAE 984 Q + + +++ S LV + L S + P L+++ + Sbjct: 893 LRRACQDIRRWLDHGIKVPHVAINASPLQFRDNNLVLQVKAALTESQIDPALIYIEVTES 952 Query: 985 AILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNL 1040 A++D ++ L+ G ++ L G + LK D + +D ++ + Sbjct: 953 ALMDDVPRNEAMLKALKDLGIKLSLDDFGTGYSSLSYLKRFPFDQVKIDQSFVRDIATSQ 1012 Query: 1041 MDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 D +L+ +I A LGMK IA V + + D I G + Sbjct: 1013 SDSLLVKVIVSMAHGLGMKVIAEGVETEAQCEIMRTSICDEIQGYFFCKPISAQAIEE 1070 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 74/514 (14%), Positives = 159/514 (30%), Gaps = 60/514 (11%) Query: 215 PFTFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFL 274 P L+ +A RL + A L + L+ + + ++ Sbjct: 10 PDDLAGTSLIRAAGRLVLVYAVFAGLWIWLSDELLAWLVSDPAEIVQASIFKGWLFVVAT 69 Query: 275 ----LILLPANIMTMVMYAFRAERKHIS--ESETHFRNAMEYSAIGMALVGTEGQWLQTN 328 LL + ++ + R + S+ ++ S + G++L N Sbjct: 70 SLLLYGLLRRLLRQSLVASMREQEAQAENHRSQQLLTALIDSSTDAIFAKDLAGRYLLFN 129 Query: 329 KALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVV 388 + +G + E G L PE +++++ T S E+ +G+ V Sbjct: 130 HETTRVMGTTPERALGHDDTALFPPEQAELIRANDQRVLALNRTT-SYEETLETVDGERV 188 Query: 389 WALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELK 448 L +R ++G + DI + KR E L R A Sbjct: 189 -FLATKGPLRDSNGQVIGLFGISRDITDRKRDETRL-TLEARRAEALLTLPGAAEIMTES 246 Query: 449 PNIFSWDKRMFELYE---------IPPHIKPNWQVW------------YECVLPEDRQHA 487 + + +L W ++ P + Sbjct: 247 AFMQHGQELAEQLTGSQIAFIHLVHDDQETIELVNWSRSTLAQYCTSAFDRHYPVSQARI 306 Query: 488 EK---VIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGI-------- 536 +R S+ + + + +G + L N + G V + G+ Sbjct: 307 WADALRLRTSVVINDYASVMGKHGLPEGHAQLDRLINVPVIDGGLVRMMAGVGNKPEPYT 366 Query: 537 -------------NMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPV 583 + ++ AL + ++R + D+ + + +D+ + T+++P Sbjct: 367 EADVETVRLIADAVWRIVRQRRAETALHESEQRHRLLADNASDVIWTMDLKGRFTYVSPS 426 Query: 584 AEKMSGWTQEEALGVPLLTVLHIT-----FGDNGPLMENIYSADTSRSAIEQDVVLHCRS 638 EK+ G+T E + L L + G M ++ + ++ C+ Sbjct: 427 VEKLRGFTSAEVMQQTLAQTLCPSSIPVATEALGKSMASMAAGLPFIG-FRGELEQPCKD 485 Query: 639 GGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESR 672 G + S + G +G V V +++TE + Sbjct: 486 GSTVWTEISTNGMRNEQGDFVGIVGVSRNITERK 519 Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 37/282 (13%), Positives = 92/282 (32%), Gaps = 11/282 (3%) Query: 276 ILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFL 335 + + R + ESE R + ++ + + +G++ + ++ + Sbjct: 372 TVRLIADAVWRIVRQRRAETALHESEQRHRLLADNASDVIWTMDLKGRFTYVSPSVEKLR 431 Query: 336 GYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEIN-----TYSMEKRYYNRNGDVVWA 390 G++ E+ T Q P + + + K ++ + E ++G VW Sbjct: 432 GFTSAEVMQQTLAQTLCPSSIPVATEALGKSMASMAAGLPFIGFRGELEQPCKDGSTVWT 491 Query: 391 LLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPN 450 ++ + +R+ G + + +I E K +Q Q G GI + + + Sbjct: 492 EISTNGMRNEQGDFVGIVGVSRNITERKAQQQQLQLAA----QVFAQGREGITVTDARGH 547 Query: 451 IFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVK 510 I ++ E+ + + + S + E K Sbjct: 548 IIMVNRAFSEITGYTQAEVLGQNPRILKSERQSPEFYLDMWTALTTSGH-WAGEMWNRKK 606 Query: 511 DGIRHIRALA-NRVLNKEGEVERLLGINMDMTEVKQLNEALF 551 DG + +A + + + +G + D++ K + Sbjct: 607 DGTVYPEWMAISALRDSQGLTTHYVASFSDLSTAKAAESRIQ 648 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 57/156 (36%), Gaps = 1/156 (0%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + ERK + G+ + G + N+A + GY+Q E+ G Sbjct: 511 VSRNITERKAQQQQLQLAAQVFAQGREGITVTDARGHIIMVNRAFSEITGYTQAEVLGQN 570 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 + L + + ++ ++ E ++G V +A+S +R + G + Sbjct: 571 PRILKSERQSPEFYLDMWTALT-TSGHWAGEMWNRKKDGTVYPEWMAISALRDSQGLTTH 629 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGI 442 ++A D++ K E Q L + TL + Sbjct: 630 YVASFSDLSTAKAAESRIQWLSQFDTLTGLPNRTLL 665 >UniRef50_B9ZNS8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZNS8_9GAMM Length = 944 Score = 823 bits (2128), Expect = 0.0, Method: Composition-based stats. Identities = 153/711 (21%), Positives = 274/711 (38%), Gaps = 29/711 (4%) Query: 408 IAQIEDINE--LKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFE-LYEI 464 +A D + L + Q + + R+ +WE + + + + L Sbjct: 228 MAAHLDTTQSTLLQQNQQLNRSVARLESMLGGANAILWESNPESHEWEFVAGDTRKLLGF 287 Query: 465 PPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVL 524 P ++ + P+D + P +++R ++G Sbjct: 288 PSRNLGRGELRARHIHPDDLPRVREA--AHAAGNEPQVVDYRFAHRNGQWIWLRDILSSA 345 Query: 525 NKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVA 584 G L G+ +D+T ++ AL + + R ++ I E + D + T +NP Sbjct: 346 EDPGSRRSLRGLTLDVTAHRRAAAALKESENRYQDVVNHISEVIFRTDAEGRWTLLNPAW 405 Query: 585 EKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAI--EQDVVLHCRSGGSY 642 E ++G+ EE LG P+ + D+ ++ S +++ L G Sbjct: 406 EALTGFKVEETLGQPMCAFVDPEDRDDA---QSFCSTLLEGGTHAQSEEIRLRTHDGSHR 462 Query: 643 DVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRI 702 V + DG + + + D+++ ++ ++ A D LT L NR +L Sbjct: 463 WVSIYASARFDEDGHIMATFGTMMDISDRKEAEEEIRRLAFFDGLTGLPNRTLLHDRLGQ 522 Query: 703 LLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGG 762 L T A++FIDLD FK +ND+ GHA GD LL ++A M + +R +D LARLGG Sbjct: 523 ALANTARTRHHGAVLFIDLDNFKDINDTLGHAVGDDLLCQVARRMENSVREADTLARLGG 582 Query: 763 DEFGLLLPDCNVE------SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNH 816 DEF ++L D + + A + ++I+ + + F G+ V S G TL + Sbjct: 583 DEFVIILNDLHPDPARAATEAEAVGRKLINLLRE-PFQLAGQNRHVTPSIGATLFSGRSL 641 Query: 817 QAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAH 876 EV+ QAD+A Y +KN GR V Y+P+ A R + + + + E++ ++ Sbjct: 642 GVEEVLKQADLAMYRAKNAGRNTVRFYDPELHRAVEARFELENELR-HALDEDRFSVVYQ 700 Query: 877 GVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAA 935 E R + L W + I F L + R+V Q Sbjct: 701 PQVD---AEGRVIGAELLLRWEHAQRGAISPAEFIPVAEQTGLIVPIGRKVLRTACAQLG 757 Query: 936 KAVAS---KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES 992 + + +++S+ +S V L E L+ + P L L + +L+ ++ Sbjct: 758 AWQHTAAFRDLTLSVNISARQFRDPHFVPHLREILQETGAPGDRLKLELTESMLLEEIDT 817 Query: 993 ----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITI 1048 + +LR G L G LK L +D +V + D + + Sbjct: 818 VVAHIDELRALGVEFALDDFGTGYSSLAYLKQLPLAQLKIDQSFVRDVLDDPNDAAIAQM 877 Query: 1049 IQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNS 1099 + A+ L + IA V L G+G G + L L + Sbjct: 878 VVNLARTLDLDVIAEGVETVEQRAFLFGLGCRHFQGFLYGYPGDLADLERA 928 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 83/257 (32%), Gaps = 5/257 (1%) Query: 279 PANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYS 338 +T+ + A R + ESE +++ + + + + EG+W N A G+ Sbjct: 353 SLRGLTLDVTAHRRAAAALKESENRYQDVVNHISEVIFRTDAEGRWTLLNPAWEALTGFK 412 Query: 339 QEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVR 398 EE G PED + L+ G + S E R +G W + S Sbjct: 413 VEETLGQPMCAFVDPEDRDDAQSFCSTLLEGGTHAQSEEIRLRTHDGSHRWVSIYASARF 472 Query: 399 HTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRM 458 DG + + DI++ K E+ ++L L + + + + Sbjct: 473 DEDGHIMATFGTMMDISDRKEAEEEIRRLAFFDGLTGLPNRTLLHD---RLGQALANTAR 529 Query: 459 FELYE-IPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSR-SPFKLEFRITVKDGIRHI 516 + + N++ + + + +++ R+ + + + Sbjct: 530 TRHHGAVLFIDLDNFKDINDTLGHAVGDDLLCQVARRMENSVREADTLARLGGDEFVIIL 589 Query: 517 RALANRVLNKEGEVERL 533 L E E + Sbjct: 590 NDLHPDPARAATEAEAV 606 Score = 136 bits (344), Expect = 5e-30, Method: Composition-based stats. Identities = 76/502 (15%), Positives = 156/502 (31%), Gaps = 36/502 (7%) Query: 78 AASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYN----PLQNLADWLRLALGSAI 133 A + + + T+ I A+VGA+L + L+ A+ LGSA+ Sbjct: 8 ACGAFMRLNVAWQIIIGTVAIQVAMVGALLFSGITQVQQNQQEVLERTAEQQSRLLGSAL 67 Query: 134 VPPLLGG--VLVVLLTPGDDPLRAFLIWVLSES----IGALALVPLGLLFKPHYLLRHRN 187 P L ++ L L V+ ++ + ++ + P L + Sbjct: 68 TPGLAYADPAMLQDLLDLLGDDSNVLYAVVLDASERPMASVGVAPDALPAPEAGVRSESG 127 Query: 188 PRLLFESL-----LTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFLTT 242 + + + + S ++ L VLL + L + A L L T Sbjct: 128 QVEIARGIELSGQPLGTVAVGYSTDAIDQLSTNLLERNVLLALGVLGLSILAAILFALMT 187 Query: 243 VMMVSLMMAADPSLLATPRTYLMSHMPW--LPFLLILLPANIMTMVMYA--FRAERKHIS 298 + L++ +L A + + L + + + ++ Sbjct: 188 TRRLRLLLQGGRALEAGQLDHRVKIDSRDEFGDLARTFNDMAAHLDTTQSTLLQQNQQLN 247 Query: 299 ESETHFRNAMEYSAIGMALVGTEGQ-WLQTNKALCQFLGYS-----QEELRGLTFQQLTW 352 S + + + + E W + LG+ + ELR Sbjct: 248 RSVARLESMLGGANAILWESNPESHEWEFVAGDTRKLLGFPSRNLGRGELRARH----IH 303 Query: 353 PEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIE 412 P+DL + + ++ R+ +RNG +W +S G+ Sbjct: 304 PDDLPRVREAAHAA---GNEPQVVDYRFAHRNGQWIWLRDILSSAEDP-GSRRSLRGLTL 359 Query: 413 DINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNW 472 D+ +R ++ R I+ + + + L Sbjct: 360 DVTAHRRAAAALKESENRYQDVVNHISEVIFRTDAEGRWTLLNPAWEALTGFKVEETLG- 418 Query: 473 QVWYECVLPEDRQHAEKVIRDSLQSRS-PFKLEFRIT-VKDGIRHIRALANRVLNKEGEV 530 Q V PEDR A+ L+ + E R+ R + A+ +++G + Sbjct: 419 QPMCAFVDPEDRDDAQSFCSTLLEGGTHAQSEEIRLRTHDGSHRWVSIYASARFDEDGHI 478 Query: 531 ERLLGINMDMTEVKQLNEALFQ 552 G MD+++ K+ E + + Sbjct: 479 MATFGTMMDISDRKEAEEEIRR 500 >UniRef50_Q2BPN3 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) withPAS/PAC sensor n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPN3_9GAMM Length = 878 Score = 823 bits (2127), Expect = 0.0, Method: Composition-based stats. Identities = 147/699 (21%), Positives = 280/699 (40%), Gaps = 30/699 (4%) Query: 417 LKRTEQVNQQLMERITLANEAGGIGIWEWELKPN----IFSWDKRMFELYEIPPHIKP-N 471 +++ Q + +A ++++ L + + I + Sbjct: 184 RFSSQENLQHKERLLENITQAMPGVVYQYHLDDELKQSFTYIGPGIETISGITAEAAIED 243 Query: 472 WQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGI-RHIRALANRVLNKEGEV 530 + ++E V P+DR I + + + EFR+ K+G +R A E Sbjct: 244 FSEFWEQVHPDDRSGLWASIVHTGKHGLAWSHEFRVFHKNGQMHWVRGSALPSKLGSQEG 303 Query: 531 ERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGW 590 GI +D+T K E L I S E ++ D +I +N +SG+ Sbjct: 304 LLWNGIILDITPEKASIEQL----RLAGIAFSSTNEGIMITDKRNRIIDINRAYMNISGY 359 Query: 591 TQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITP 650 ++E +G + + + ++I+ + + ++ ++G +I Sbjct: 360 GRDELIGKNPSILR--SEHHSNEFYQSIWKSLEEERHWQGEIWNRLKNGEVVPHWVNINA 417 Query: 651 LSTLD-GSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNS 709 + + + V VI D++ + +LS+ A HDALT+L NR F +L L + Sbjct: 418 VHDPNTDALTHFVSVIADISNIKASEEKLSHLAHHDALTNLPNRLLFSARLDHALT--HR 475 Query: 710 THQRHALVF-IDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLL 768 ++F +DLDRFK +NDS GH GD LL ++ + +L D LAR+GGDEF +L Sbjct: 476 EASEKIVMFHLDLDRFKHINDSLGHKYGDQLLLQVTERLKGVLSDKDTLARVGGDEFAIL 535 Query: 769 LPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADI 827 + + +V A IA R++ A+ F +G+ + AS G+ L D+ + ADI Sbjct: 536 VEELEHVSDAESIADRLVEAMEQ-PFTLDGKDYFTTASIGLALAPDHGDDIDTLTKHADI 594 Query: 828 ACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEAR 887 A +K+ GR ++P+ + E + + + + + ENQ + Sbjct: 595 ALNQAKDSGRNNFAFFQPELSETVQEWIKLEPELR-KALAENQFQLHYQPQVD---STGT 650 Query: 888 -NLWLISLKLWS-CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK--GI 943 + +L W E II F + L + + V + +Q + + G Sbjct: 651 AIVGAEALIRWHHPEMGIIPPNQFLPIAEEIGLMNKIGEWVMNTALEQLSFWRSRGLIGF 710 Query: 944 SISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLA 999 +++ L+ ++ L +++ LE+ +P +L L I +++H E + ++LR Sbjct: 711 RLAINLAGDQITKQNLPMVVMQALEHFQIPAEMLELEILETFLMEHEEEATSTFKQLREL 770 Query: 1000 GCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMK 1059 G + L G + LK + +D L ++ + DE + + A L + Sbjct: 771 GVHLSLDDFGTGYSALSYLKKLPITKVKIDQSLVRDIPEDPNDEAIAKAVILLAHTLDLT 830 Query: 1060 TIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 A V + L D + G + + + N Sbjct: 831 VCAEGVETRAQREFLESENCDQLQGYLFSKPIEANAFTN 869 Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 82/242 (33%), Gaps = 5/242 (2%) Query: 294 RKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWP 353 K E A + G+ + + + N+A GY ++EL G L Sbjct: 316 EKASIEQLRLAGIAFSSTNEGIMITDKRNRIIDINRAYMNISGYGRDELIGKNPSILRSE 375 Query: 354 EDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTD-GTPLYFIAQIE 412 N+ Q + K + E + E +NG+VV + ++ V + +F++ I Sbjct: 376 HHSNEFYQSIWKSLEEER-HWQGEIWNRLKNGEVVPHWVNINAVHDPNTDALTHFVSVIA 434 Query: 413 DINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNW 472 DI+ +K +E+ L L N + ++ L + + ++ + Sbjct: 435 DISNIKASEEKLSHLAHHDALTNLPNRL-LFSARLDHALTHR-EASEKIVMFHLDLDRFK 492 Query: 473 QVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVER 532 + Q +V S R+ + + L V + E +R Sbjct: 493 HINDSLGHKYGDQLLLQVTERLKGVLSDKDTLARVGGDEFAILVEEL-EHVSDAESIADR 551 Query: 533 LL 534 L+ Sbjct: 552 LV 553 Score = 110 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 46/374 (12%), Positives = 115/374 (30%), Gaps = 23/374 (6%) Query: 188 PRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFLTTVMMVS 247 ++L + ++ + L P W +R + L + + + Sbjct: 85 AQVLLDGMVPGVGAGSCGTSVFLGSPVFVIDTAEDNRWDQLRPIAQQLDLRACWSYPIRT 144 Query: 248 LMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNA 307 AD + + P +L A + ++ + ++++ E N Sbjct: 145 ---DADEIAGSFAISSFTPRQPTPFHAQLLEAAANIAGIVLNRFSSQENLQHKERLLENI 201 Query: 308 MEYSAIGMALVGTEGQ----WLQTNKALCQFLGYSQEELRGLTFQQL---TWPEDLNKDL 360 + + + + + + G + E F + P+D + Sbjct: 202 TQAMPGVVYQYHLDDELKQSFTYIGPGIETISGITAEAAI-EDFSEFWEQVHPDDRSGLW 260 Query: 361 QQVEKLISGEIN-TYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKR 419 + + +G+ +S E R +++NG + W + + L + I DI K Sbjct: 261 ASI--VHTGKHGLAWSHEFRVFHKNGQMHWVRGSALPSKLGSQEGLLWNGIILDITPEKA 318 Query: 420 TEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECV 479 + + + +A + GI + + I ++ + Sbjct: 319 SIEQLRLA----GIAFSSTNEGIMITDKRNRIIDINRAYMNISGYGRDELIGKNPSILRS 374 Query: 480 LPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGI---RHIRALANRVLNKEGEVERLLGI 536 + + I SL+ ++ E +K+G + A N + + + + Sbjct: 375 EHHSNE-FYQSIWKSLEEERHWQGEIWNRLKNGEVVPHWVNINAVHDPNTDA-LTHFVSV 432 Query: 537 NMDMTEVKQLNEAL 550 D++ +K E L Sbjct: 433 IADISNIKASEEKL 446 >UniRef50_B1Y791 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y791_LEPCP Length = 1066 Score = 822 bits (2125), Expect = 0.0, Method: Composition-based stats. Identities = 169/887 (19%), Positives = 314/887 (35%), Gaps = 65/887 (7%) Query: 261 RTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERK---HISESETHFRNAMEYSAIGMAL 317 + + LL L +M ++M R + ++ SE H R M L Sbjct: 172 IDHQRWLTLFTLGLLSALAITLMGVLMRLSRQRNESDAALAASEAHLRTFMRAMPDVSFL 231 Query: 318 VGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSME 377 +G++L + E + G + + + + + E Sbjct: 232 FDRDGRYLDVFGPAEKLAE-PVERMLGRRIADVHGERHVELFMSVIRLALE-TREPQRCE 289 Query: 378 KRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEA 437 + G W V V + + DI+E + E +L + ++ Sbjct: 290 FALEVQQGT-RWFEARVCAVPDRE----QVVWVSWDISERRAAELRVTELTRLYSFISQV 344 Query: 438 GGIGIWE-----------------------WELKPNIFSWDKRMFELYEIPPHIKPNWQV 474 +W W ++ + + R+ + Sbjct: 345 NQAFVWTRSEAELFDRICNVAISHGHLRLAWVVQRDGAASAPRVAVQRGDSTLVHLCAAS 404 Query: 475 WYECVLPEDRQHAEKVIRDSLQSR---------SPFKLE-FRITVKDGIRHIRALANRVL 524 ++ ++ ++Q R +P L + + + L L Sbjct: 405 LPPATHSHAMAVSQSLLTGTVQWRPGSVKPAGEAPLDLVSVPVRNLNQVVAAVVLVGNKL 464 Query: 525 NKEGEVERLL--GINMDMTE------VKQLNEALFQEKERLHITLDSIGEAVVCIDMAMK 576 + E ++ L + DM+ + + L+S + V+ D+ + Sbjct: 465 DPEDREQQALIAELGSDMSHALAQFTREAQWQESLARTRLHAAALESTQDGVMVTDLRPR 524 Query: 577 ITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHC 636 I +N +++G+++ EA+G+ + + +++ + + +V Sbjct: 525 IVSVNRAFTEITGYSETEAVGMSPRLLQ--SGRHEPAFFTRLWNQLLTHGRWQGEVQNRR 582 Query: 637 RSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASF 696 ++G Y S++ + V V D+T ++ ++L + A D LT L NR Sbjct: 583 KNGELYTQWMSVSTVRDEHDQPTHYVSVFTDITPQKEAEQRLQHLAHFDPLTQLPNRLMV 642 Query: 697 EKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDV 756 +L + + +R A++FIDLD FK VNDS GH+AGD LLR +A + + R D Sbjct: 643 LSRLEHAIASAARAERRVAVLFIDLDNFKTVNDSLGHSAGDDLLRAVADRLGTRTRREDT 702 Query: 757 LARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNN 815 L RLGGDEF L+L + A +A +I + + F G+ V AS GI+L D+ Sbjct: 703 LGRLGGDEFILMLEHLREPQDAAQVAQELIGLL-ETPFRVAGQEVYVQASIGISLYPDDG 761 Query: 816 HQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLA 875 + E++ AD A Y +K GRG Y A R A+ R ++ + ++ Sbjct: 762 LEVGELVRDADAAMYQAKRAGRGVYRFYTESLTTAAQSRLALDT-RLRRALENKEFVLWY 820 Query: 876 HGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQA 934 + R+ + + L +L I F + L V E +Q Sbjct: 821 QPLY--RLADRCLIGLEALVRLNQPGLPPIGPAEFIPLLEETGQITTLGAWVTQEACRQG 878 Query: 935 AKAVASKG--ISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES 992 + I++ LS + + E LE S LP L L + +++ E Sbjct: 879 RAWLDEGLDFGRIAINLSPQEIRRGQTDERVREALERSGLPAERLELELTESGLMEQGER 938 Query: 993 ----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITI 1048 + +LR G R+ + G LK L +D ++ + D L+ Sbjct: 939 AEAFLHRLRALGVRLAIDDFGTGYSSLAYLKRFPVSKLKIDRSFVRDLPADANDAQLVQT 998 Query: 1049 IQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDL 1095 + + LG+ +A V D L +G D G + +P D Sbjct: 999 MVSMGRNLGISVLAEGVETEAQFDYLRSLGCDAAQGYFFSPPRPADE 1045 >UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteobacteria RepID=A6SVJ0_JANMA Length = 956 Score = 822 bits (2125), Expect = 0.0, Method: Composition-based stats. Identities = 121/572 (21%), Positives = 234/572 (40%), Gaps = 21/572 (3%) Query: 536 INMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDM---AMKITFMNPVAEKMSGWTQ 592 + D+ K L + +++ A++ + ++NP +++G++ Sbjct: 376 LIADIAARKHAEHELQLRER----AIEASANAIIIARAVAPDYPLEYVNPAFTRITGYSP 431 Query: 593 EEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLS 652 EEALG + + + G +E + S + + + + G + I P+ Sbjct: 432 EEALGRNIGFLWGKDWEQPG--IEELRSIALEKREGHAVLRNYRKDGALFWSDLYIAPVK 489 Query: 653 TLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQ 712 G V+ + D+T +++ +L + + DALT LANR+ +L + + + Sbjct: 490 DDTGEVSHFVVALYDITATKRYESELEFQTNRDALTGLANRSLLRDRLSQAISYAHRYNH 549 Query: 713 RHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD- 771 + F+DLDRFK VND+ GH AGD LL+ +A + +R +D ++R+GGDEF L+LP+ Sbjct: 550 PIWIAFVDLDRFKFVNDTLGHQAGDLLLKAIAERLQHAVRDTDTVSRMGGDEFVLILPER 609 Query: 772 CNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYA 831 + + I RI+ + EG + +S G+ + ++ E++ ADIA Y Sbjct: 610 VDAGLSTGIVQRIMDGIAQ-PLTIEGHEFFISSSIGVAVYPNDGVTPEELIKHADIAMYR 668 Query: 832 SKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWL 891 +K GR Y ER + D + ++ + ++ R + + + Sbjct: 669 AKETGRNNFQFYTSSMNERALERLRLEGDLR-NAMERGEFILHYQPQLDLR--TGKIVGV 725 Query: 892 ISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKG--ISISLP 948 +L W E +I F + L + V E +Q + +S+ Sbjct: 726 EALIRWQHPELGMIPPMRFIGLAEETGLIVPIGAWVIREACRQNKVWQEHGLGSLRMSVN 785 Query: 949 LSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIV 1004 LS + L+ + LE + LPP+ L + + ++ + +++L+ G ++ Sbjct: 786 LSARQFAQQDLLESIALALEETQLPPQCLEIELTESLVMADVDHAIGILRELKALGVQLS 845 Query: 1005 LSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGP 1064 + G + LK D L +D ++ + D ++ I A L + IA Sbjct: 846 IDDFGTGYSSLSYLKRFPIDVLKIDRSFVNDITTDPDDAAIVASIISLAHSLRLTVIAEG 905 Query: 1065 VVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 V + L D I G + D + Sbjct: 906 VETEEQLAYLQQHDCDQIQGYFFSRPITADAM 937 Score = 119 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 114/336 (33%), Gaps = 20/336 (5%) Query: 213 PWPFTFIIVLLMWSAVRLPRMEAFL------IFLTTVMMVSLMMAADPSLLATPRTYLMS 266 P+ F + WS V FL ++ V ++ +++A L R+ + Sbjct: 300 PYDHVFDVAGKTWSMVVSTPSMLFLKNSSSALWAFLVGLLLSVVSAIYVQLIVDRSRRIQ 359 Query: 267 HMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMAL---VGTEGQ 323 + + + + + A + + E A+E SA + + V + Sbjct: 360 LLVDDRTAQLRTVNDDLIADIAARKHAEHELQLRER----AIEASANAIIIARAVAPDYP 415 Query: 324 WLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNR 383 N A + GYS EE G L + ++++ + + +++ R Y + Sbjct: 416 LEYVNPAFTRITGYSPEEALGRNIGFLWGKDWEQPGIEELRSIALEKREGHAV-LRNYRK 474 Query: 384 NGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIW 443 +G + W+ L ++ V+ G +F+ + DI KR E + R L A + Sbjct: 475 DGALFWSDLYIAPVKDDTGEVSHFVVALYDITATKRYESELEFQTNRDALTGLANRSLL- 533 Query: 444 EWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKL 503 + S+ R I ++ + + + K I + LQ + Sbjct: 534 -RDRLSQAISYAHRYNHPIWIAFVDLDRFKFVNDTLGHQAGDLLLKAIAERLQH--AVRD 590 Query: 504 EFRITVKDGIRHIRALANRVLNKEGEVERLLGINMD 539 ++ G + L G ++ MD Sbjct: 591 TDTVSRMGGDEFVLIL--PERVDAGLSTGIVQRIMD 624 Score = 60.1 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 41/150 (27%), Gaps = 7/150 (4%) Query: 410 QIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWE---LKPNIFSWDKRMFELYEIPP 466 I DI K E Q A EA I + + + P Sbjct: 376 LIADIAARKHAEHELQLRER----AIEASANAIIIARAVAPDYPLEYVNPAFTRITGYSP 431 Query: 467 HIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNK 526 + + ++ E++ +L+ R + + V + Sbjct: 432 EEALGRNIGFLWGKDWEQPGIEELRSIALEKREGHAVLRNYRKDGALFWSDLYIAPVKDD 491 Query: 527 EGEVERLLGINMDMTEVKQLNEALFQEKER 556 GEV + D+T K+ L + R Sbjct: 492 TGEVSHFVVALYDITATKRYESELEFQTNR 521 >UniRef50_C6P1Y8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Y8_9PROT Length = 812 Score = 822 bits (2123), Expect = 0.0, Method: Composition-based stats. Identities = 130/595 (21%), Positives = 240/595 (40%), Gaps = 22/595 (3%) Query: 517 RALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMK 576 V ++GE + + + + ++ + + + S +A++ D Sbjct: 213 MEQFVPVKLEQGEQDEIGKLGLAFNQMSEALSNSERSMKLAASIYQSNADAIMVTDENNL 272 Query: 577 ITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHC 636 I +NP +++G+T +E G + + + +++ A + + ++ Sbjct: 273 IVDVNPAFTRITGYTLDEVRGKNPRIMQ--SGKHDNEFYRHMWQAILNEGHWQGEIWDKR 330 Query: 637 RSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASF 696 ++G Y I+ L DG V D+TE ++ + + A++DALT L NR Sbjct: 331 KTGEIYAKLAHISILRRSDGGVYRHVAQFSDITEKKQKDELIFWQANYDALTCLPNRRLL 390 Query: 697 EKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDV 756 +L L AL+F+DLD+FK +ND+ GHA GD LL E+A + S +R D Sbjct: 391 NDRLAHALAANKRNEDCGALMFLDLDKFKTLNDTLGHAYGDMLLVEVARRIKSCVREVDT 450 Query: 757 LARLGGDEFGLLLPDCNVE------SARFIATRIISAVNDYHFIWEGRVHRVGASAGITL 810 +AR+GGDEF +LL + + +A IA +I ++++ + ++H S G++L Sbjct: 451 VARIGGDEFVVLLENLGADIKDATQAAAHIAEKIRASLS-TPYQLHDKMHHSSPSIGVSL 509 Query: 811 IDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQ 870 I N A E++ QAD+A Y +K GR V ++PQ + AA+ D + + E Q Sbjct: 510 IHCNGESAEELIKQADMAMYQAKEAGRNAVRFFDPQMQQSVETIAALESDLR-HAVHERQ 568 Query: 871 LMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHE 929 L + + +L W ++ F + +L + V E Sbjct: 569 LQLFYQIQLD---HTHHPVGAEALLRWIHPVRGMVSPAQFIPFAEESSLILDIGHWVLDE 625 Query: 930 FFQQAAKAVAS---KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAI 986 +Q A + + +++ +S V + + + P L L + Sbjct: 626 ACRQIAAWSHQERTRDLVLAVNISARQFKQPDFVEQVGAMIRKHAIQPARLKLELTESIA 685 Query: 987 LDHAE----SVQKLRL-AGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLM 1041 L+ + + LR G + L G + LK D + +D ++ + Sbjct: 686 LEELDVIITKMHALRNGLGISLSLDDFGTGYSSLSYLKRLPLDQIKIDQSFVRDMTVDSG 745 Query: 1042 DEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 D +++ I A G++ IA V L G L G + PL Sbjct: 746 DAVMVKTIIDMAHNFGIEVIAEGVETAGQFFLLKQYGCLLFQGYLFGRPVPLREF 800 Score = 136 bits (343), Expect = 6e-30, Method: Composition-based stats. Identities = 44/317 (13%), Positives = 107/317 (33%), Gaps = 9/317 (2%) Query: 228 VRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPR--TYLMSHMPWLPFLLILLPANIMTM 285 + M L+F +++ L +T S ++P L + + Sbjct: 172 ILGHIMLQILLFFAINWLINRFTRPIVKLQSTMESMQLSGSMEQFVPVKLEQGEQDEIGK 231 Query: 286 VMYAFRAERKHISESET---HFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEEL 342 + AF + +S SE + + +A + + + N A + GY+ +E+ Sbjct: 232 LGLAFNQMSEALSNSERSMKLAASIYQSNADAIMVTDENNLIVDVNPAFTRITGYTLDEV 291 Query: 343 RGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDG 402 RG + + + N+ + + + I E + E + G++ L +S++R +DG Sbjct: 292 RGKNPRIMQSGKHDNEFYRHMWQAILNE-GHWQGEIWDKRKTGEIYAKLAHISILRRSDG 350 Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELY 462 +AQ DI E K+ +++ L + + + + +KR + Sbjct: 351 GVYRHVAQFSDITEKKQKDELIFWQANYDALTCLPNRRLL--NDRLAHALAANKRNEDCG 408 Query: 463 EIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSR-SPFKLEFRITVKDGIRHIRALAN 521 + ++ + + + ++S RI + + + L Sbjct: 409 ALMFLDLDKFKTLNDTLGHAYGDMLLVEVARRIKSCVREVDTVARIGGDEFVVLLENLGA 468 Query: 522 RVLNKEGEVERLLGINM 538 + + + Sbjct: 469 DIKDATQAAAHIAEKIR 485 Score = 58.2 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 21/157 (13%), Positives = 49/157 (31%), Gaps = 2/157 (1%) Query: 396 LVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWD 455 V+ G N++ +++ M+ ++ I + I + Sbjct: 218 PVKLEQGEQDEIGKLGLAFNQMSEALSNSERSMKLAASIYQSNADAIMVTDENNLIVDVN 277 Query: 456 KRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRH 515 + D + + + ++ + ++ E K G + Sbjct: 278 PAFTRITGYTLDEVRGKNPRIMQSGKHDNE-FYRHMWQAILNEGHWQGEIWDKRKTGEIY 336 Query: 516 I-RALANRVLNKEGEVERLLGINMDMTEVKQLNEALF 551 A + + +G V R + D+TE KQ +E +F Sbjct: 337 AKLAHISILRRSDGGVYRHVAQFSDITEKKQKDELIF 373 >UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U882_9DELT Length = 958 Score = 820 bits (2119), Expect = 0.0, Method: Composition-based stats. Identities = 128/571 (22%), Positives = 242/571 (42%), Gaps = 18/571 (3%) Query: 536 INMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEA 595 + ++ E + + L ++ E + D + + +NP ++G+T EE Sbjct: 385 LRAEIDERTRAEQRL----RLYEKVFENALEGISITDKSGVMVAVNPAFTTITGFTSEEV 440 Query: 596 LGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLD 655 +G + + +++ +R + ++ ++G SY SI+ + D Sbjct: 441 IGKNPRVLK--SDMHGEEFYGEMWTTLKARGSWHGEIWNRRKNGESYPEILSISSIRDDD 498 Query: 656 GSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHA 715 G V V D+++ + QL++ HD LT L NR +L + L N T + A Sbjct: 499 GEIANYVAVFHDISDMKHKEEQLAHHLYHDGLTGLPNRVLVLDRLSMALSHANRTGTKVA 558 Query: 716 LVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE 775 ++F+DLD FK +NDS GHA GD LL+ +A ++++ R D +AR GGDEF +++ D + E Sbjct: 559 VLFLDLDNFKKINDSFGHAQGDTLLKAVAERLVALYRDEDTVARQGGDEFLVVVVDVHEE 618 Query: 776 -SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKN 834 +A + + F+ +G+ + S G+TL D+ A ++ AD+A Y SK Sbjct: 619 REVVDLAEGLQRVFEE-PFVIKGQEVFITPSIGVTLYPDDGQDPASLVKNADMAMYQSKA 677 Query: 835 GGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISL 894 GR ++ Q + ++R + D + R +KE + + + L +L Sbjct: 678 KGRNSYFLFTQQMSERIAQRLTLESDMR-RALKEREFTVYFQPKVD--LASGEVSGLEAL 734 Query: 895 KLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQ--QAAKAVASKGISISLPLSV 951 W +G I+ + F + L L V + Q + V +++++ LS Sbjct: 735 VRWVKPDGIIVSPEDFIPMAEETGLIVPLGEFVLDASCKAMQVLQGVGCSALTVAVNLSP 794 Query: 952 AGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLSQ 1007 LV ++ LE + LP L L I ++ + + +L G I + Sbjct: 795 IQFGQEDLVEMVVANLERNGLPASRLELEITESTLMTDVQSSVAQLNRLVELGITISIDD 854 Query: 1008 VGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVL 1067 G LK L +D ++ + D ++ + A+ +G+ +A V Sbjct: 855 FGTGYSSLYYLKNFPISTLKIDRSFIRDITIDDSDAKIVETVVLMARTMGIGVVAEGVET 914 Query: 1068 PLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 +D L+ G + G + PL+ ++ Sbjct: 915 KEQLDLLATFGCATVQGYYYSRPLPLEKIIE 945 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 34/253 (13%), Positives = 85/253 (33%), Gaps = 3/253 (1%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + A ER + + E + G+++ G + N A G++ EE+ G Sbjct: 385 LRAEIDERTRAEQRLRLYEKVFENALEGISITDKSGVMVAVNPAFTTITGFTSEEVIGKN 444 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 + L + ++ + ++ E +NG+ +L++S +R DG Sbjct: 445 PRVLKSDMHGEEFYGEMWTTLKAR-GSWHGEIWNRRKNGESYPEILSISSIRDDDGEIAN 503 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP 466 ++A DI+++K E+ + L + + + L + ++ ++ + Sbjct: 504 YVAVFHDISDMKHKEEQLAHHLYHDGLTGLPNRVLVLD-RLSMALSHANRTGTKV-AVLF 561 Query: 467 HIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNK 526 N++ + K + + L + + D + + Sbjct: 562 LDLDNFKKINDSFGHAQGDTLLKAVAERLVALYRDEDTVARQGGDEFLVVVVDVHEEREV 621 Query: 527 EGEVERLLGINMD 539 E L + + Sbjct: 622 VDLAEGLQRVFEE 634 >UniRef50_B0TF94 Predicted signal transduction domain protein n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TF94_HELMI Length = 853 Score = 820 bits (2119), Expect = 0.0, Method: Composition-based stats. Identities = 146/703 (20%), Positives = 282/703 (40%), Gaps = 26/703 (3%) Query: 411 IEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKP 470 + + + + TE+ + +++ A G G+ + + + + L Sbjct: 119 VRRLLQAQHTEKALKARETQLSAVASALGEGLIVLDAEGRLTFMNPEAERLLGWSLPELL 178 Query: 471 NWQVWYECVL-----PEDRQHAEKVIRDSLQSRSPF-KLEFRITVKDGIRHIRALANRVL 524 ++ + + + A+ ++ ++ + + E T KDG +L + L Sbjct: 179 GKKI-HSIIHNRRPEGDPIAEADCLVLKTIGAGETYRSDEEYFTRKDGALFPVSLVSTPL 237 Query: 525 NKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVA 584 + + D+++ K++ E L +++ E ++ D I +NP Sbjct: 238 RVNDRITGAVTAFHDISDRKKVEERLL----LAAKVIETTTEGIMITDAGGVIESVNPAF 293 Query: 585 EKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDV 644 + +G+++ EA+G + + +G ++ A + ++ +SG Y Sbjct: 294 CRSTGYSESEAIGNSPRILK--SGRHDGEFYRKMWKALLETGQWQGEIWNRRKSGELYAA 351 Query: 645 HYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILL 704 +I+ + G + D+TE ++ ++ + A HDALT L NR F +L + Sbjct: 352 WLTISAIKDSHGRTTQYAAIFSDITEDKRNQERIKHQAYHDALTDLPNRLLFIDRLTQAI 411 Query: 705 QTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDE 764 A++F+DLDRFK +ND+ GHA GD LL+ +A + +R SD +ARLGGDE Sbjct: 412 AQATRNCYMLAVLFLDLDRFKQINDTYGHALGDLLLQGVAGRLRRAVRDSDTVARLGGDE 471 Query: 765 FGLLLPDC-NVESARFIATRIISAVNDYHFIWEGR-VHRVGASAGITLIDDNNHQAAEVM 822 F +LLP +VE A +A +I++++ + +EG + S GI + + +A +M Sbjct: 472 FTILLPQIGSVEDAAKVAQKILASLRQ-PWSFEGIPSFCITTSIGIAVCPTDGEEAETLM 530 Query: 823 SQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPR 882 AD A Y +K GR +Y P+ A ER AM R + + + ++ Sbjct: 531 HNADAAMYRAKAQGRNHYQLYTPELNAWAFERLAMET-RLRRALDQGEFVLYYQPKV--E 587 Query: 883 IPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV--A 939 + +L W + ++ F R D L + E + Sbjct: 588 AATGNWCAVEALIRWQHPDLGLVSPTEFLRLAEDTGLIVPIGEWCLEEACVRNKAWQDAG 647 Query: 940 SKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQK 995 + +++ LS L+ + + L+ S LPP L L I E IL A+ + Sbjct: 648 LPPVRMAVNLSARQFQHPNLLAAVEKALQKSGLPPAWLELEISEEVILRFADLAPIVLGD 707 Query: 996 LRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQR 1055 L+ G + + Q G+ L+ D + + ++ + + A+ Sbjct: 708 LKSLGLSLTMDQYGKRDSRITLLQKLPIDRVKIAASQVIDLSACHDARKSVKALIALARS 767 Query: 1056 LGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 L + A V D L+ G D I G + +D + + Sbjct: 768 LDLHVAADGVGTREQCDFLTAAGCDEIQGHLFSDPLSAEEMGR 810 Score = 155 bits (393), Expect = 8e-36, Method: Composition-based stats. Identities = 60/450 (13%), Positives = 127/450 (28%), Gaps = 44/450 (9%) Query: 172 PLGLLFKPHYLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLP 231 PL L+ +R R E I ++ + ++ V +P Sbjct: 6 PLILVADDDPAMRFMLRRA-LEKDGYAVIEAEDGAAALE----AYEQAEPDIVLMDVLMP 60 Query: 232 RMEAFLIFLTTVMMVS------LMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTM 285 ++ F + + LM+ + + Y ++ + Sbjct: 61 VLDGFALCAQLQTLPRHRRAPVLMITGLDDDASVEKAYQSGATDYITKPIQWAVLRQRVR 120 Query: 286 VMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGL 345 + + K + ET G+ ++ EG+ N + LG+S EL G Sbjct: 121 RLLQAQHTEKALKARETQLSAVASALGEGLIVLDAEGRLTFMNPEAERLLGWSLPELLGK 180 Query: 346 TFQQLTW---PED---LNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRH 399 + PE D ++ + +GE E + ++G + L + +R Sbjct: 181 KIHSIIHNRRPEGDPIAEADCLVLKTIGAGETYRSDEEY-FTRKDGALFPVSLVSTPLRV 239 Query: 400 TDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMF 459 D + DI++ K+ E+ + E GI + I S + Sbjct: 240 ND-RITGAVTAFHDISDRKKVEERLLLAAK----VIETTTEGIMITDAGGVIESVNPAFC 294 Query: 460 ELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRAL 519 D + K+ + L++ + + Sbjct: 295 RSTGYSESEAIGNSPRILKSGRHDGEFYRKMWKALLETGQWQGEIWNRRKSGELYAAWLT 354 Query: 520 ANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEK----------------ERLHITLDS 563 + + + G + I D+TE K+ E + + + Sbjct: 355 ISAIKDSHGRTTQYAAIFSDITEDKRNQERIKHQAYHDALTDLPNRLLFIDRLTQAIAQA 414 Query: 564 IGE----AVVCIDMAMKITFMNPVAEKMSG 589 AV+ +D+ + +N G Sbjct: 415 TRNCYMLAVLFLDLD-RFKQINDTYGHALG 443 Score = 149 bits (376), Expect = 8e-34, Method: Composition-based stats. Identities = 41/301 (13%), Positives = 95/301 (31%), Gaps = 8/301 (2%) Query: 244 MMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAF-----RAERKHIS 298 +V + A + + + P L+ P + + A ++RK + Sbjct: 201 CLVLKTIGAGETYRSDEEYFTRKDGALFPVSLVSTPLRVNDRITGAVTAFHDISDRKKVE 260 Query: 299 ESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNK 358 E +E + G+ + G N A C+ GYS+ E G + + L + Sbjct: 261 ERLLLAAKVIETTTEGIMITDAGGVIESVNPAFCRSTGYSESEAIGNSPRILKSGRHDGE 320 Query: 359 DLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELK 418 +++ K + E + E ++G++ A L +S ++ + G + A DI E K Sbjct: 321 FYRKMWKALL-ETGQWQGEIWNRRKSGELYAAWLTISAIKDSHGRTTQYAAIFSDITEDK 379 Query: 419 RTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYEC 478 R ++ + L + + + + R + + ++ + Sbjct: 380 RNQERIKHQAYHDALTDLPNRLLFI--DRLTQAIAQATRNCYMLAVLFLDLDRFKQINDT 437 Query: 479 VLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINM 538 + + L+ D + V + +++L Sbjct: 438 YGHALGDLLLQGVAGRLRRAVRDSDTVARLGGDEFTILLPQIGSVEDAAKVAQKILASLR 497 Query: 539 D 539 Sbjct: 498 Q 498 >UniRef50_Q31MH3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Synechococcus elongatus RepID=Q31MH3_SYNE7 Length = 1238 Score = 820 bits (2118), Expect = 0.0, Method: Composition-based stats. Identities = 172/858 (20%), Positives = 329/858 (38%), Gaps = 38/858 (4%) Query: 259 TPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALV 318 + +L+S +P L +L + + +R + + + + G+ ++ Sbjct: 390 PSQHFLISKVPLRNELGQILGLLGIRRNVTRWRRAEQARNALSDQLEQTLAAVSDGVVVL 449 Query: 319 GTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEK 378 N Q L + E++ G F L P +L LQ + + + +T + E Sbjct: 450 DQNFVVRALNSQAAQQLKKTSEQIIGRVFWDLF-PVELGATLQSELQPLQHQSSTRTFEL 508 Query: 379 RYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAG 438 L+ + + DI++ + Q+ +++ ER L A Sbjct: 509 WIDP---------LSTCWEVNVHRSTAEISLYFRDISDRVMSRQLLEEMAERFQLVTRAT 559 Query: 439 GIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQV------WYECVLPEDRQHAEKVIR 492 +W+ L N + L+ V W + + P+ R+ + Sbjct: 560 NDAVWDRNLLTNEIWYSANYSRLFGGEEKEITQKLVQTVDLQWRDRLDPDQRERIMASLS 619 Query: 493 DSLQSR-SPFKLEFRITVKDGIR-HIRALANRVLNKEGEVERLLGINMDMTEVKQLNEAL 550 ++ + S + ++R +DG H+ V ++ G R +G D++ + NE L Sbjct: 620 GAIANGFSTWSEQYRFLRQDGTYAHVLDRGYIVRDENGRAIRAVGAMQDISAIVAANEQL 679 Query: 551 FQEKERLHITLDSIGEAVVCIDM---AMKITFMNPVAEKMSGWTQEEALGVPLLTVLHIT 607 ++S G +++ D M I ++NP EK++G++ E +G + + Sbjct: 680 ----RLWLRAIESTGNSIIIADAQQPDMPIIYVNPAFEKITGFSAAEVIGRNFRFLQGL- 734 Query: 608 FGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQD 667 +E + A + E + + + G + S+ P+ G V D Sbjct: 735 -ETQQAELEEMRRALEEGTYCEVTLRSYRKDGSLFWNQISLAPVRDQKGHLTHMVASQTD 793 Query: 668 VTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAV 727 V+ES+ L A+HDALT L NR F +L A++FIDLD FKA+ Sbjct: 794 VSESKAFEEMLLQQATHDALTGLPNRLLFLDRLDQAAARARGGGSPIAVLFIDLDNFKAI 853 Query: 728 NDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISA 787 ND H+ GDA+L+ A + ++ + +ARL DEF +LL D +V+S + +I + Sbjct: 854 NDGFSHSEGDAVLQIAAGRLQQCIQEHETVARLSSDEFVILLIDLDVQSKARVKAAMIQS 913 Query: 788 VNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQ 847 + F G + AS G+ + +E++ AD+A A+K G+ + Sbjct: 914 LMAKPFEVMGNPIELTASIGVATFPHDGQSGSELLQAADLAVCAAKQQGKNLWCSFSEAM 973 Query: 848 AAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDE 906 R + D + + + +N L + + R L +L W E ++ Sbjct: 974 REQLRSRIDIEKDLR-QALIDNSLELYFQPQVD--LVTHRLLGFETLVRWNHPERGLVAP 1030 Query: 907 QTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGIS--ISLPLSVAGLSSATLVNDLL 964 F + L A+ V + + +G + +S +S + L Sbjct: 1031 GEFIPIAEESDLIDAIGLWVMRAAGLTLRRWIDHEGFTGSLSFNISARQFIRQNIFLKLF 1090 Query: 965 EQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKA 1020 + L+ +PP L + + ++++ E +Q+ R G ++ L G LK Sbjct: 1091 DVLQEFQIPPHQLEIELTESSLIESPERFVQWLQEARSMGFQVALDDFGTGYSSLGYLKR 1150 Query: 1021 NMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVD 1080 + L +D ++ + D+ ++ I A+ L ++TIA V L IG D Sbjct: 1151 LPINALKIDRSFIRDLPHDHDDQAIVQAIVAMAKVLKLRTIAEGVERLEQAAFLEAIGCD 1210 Query: 1081 LIYGEVIADAQP-LDLLV 1097 + G P + L Sbjct: 1211 AVQGFFYGPPLPEAEALA 1228 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 49/382 (12%), Positives = 117/382 (30%), Gaps = 28/382 (7%) Query: 304 FRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQV 363 R +E + + G+ L N+A Q PE + ++ Sbjct: 321 LRRILEAIPDPIYIKDYRGEILLQNRACLDL-------------QPFVMPEVIKQEDIND 367 Query: 364 EKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQV 423 I+ + + E N L++ +R+ G L + ++ +R EQ Sbjct: 368 LATIASGLPIINEEWTINPENWPSQHFLISKVPLRNELGQILGLLGIRRNVTRWRRAEQA 427 Query: 424 NQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPED 483 L +++ A G+ + + + + + + + +V+++ E Sbjct: 428 RNALSDQLEQTLAAVSDGVVVLDQNFVVRALNSQAAQQLKKTSEQIIG-RVFWDLFPVEL 486 Query: 484 RQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEV 543 + ++ S E I +N + D+++ Sbjct: 487 GATLQSELQPLQHQSSTRTFELWIDP--------LSTCWEVNVHRSTAEISLYFRDISDR 538 Query: 544 KQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGV----- 598 + L + ER + + +AV ++ + + ++ G ++E Sbjct: 539 VMSRQLLEEMAERFQLVTRATNDAVWDRNLLTNEIWYSANYSRLFGGEEKEITQKLVQTV 598 Query: 599 PLLTVLHITFGDNGPLMENIYSADTSR-SAIEQDVVLHCRSGGSYDVHYSITPLSTLDGS 657 L + +M ++ A + S + + G V + +G Sbjct: 599 DLQWRDRLDPDQRERIMASLSGAIANGFSTWSEQYRFLRQDGTYAHVLDRGYIVRDENGR 658 Query: 658 NIGSVLVIQDVTESRKMLRQLS 679 I +V +QD++ QL Sbjct: 659 AIRAVGAMQDISAIVAANEQLR 680 Score = 74.3 bits (182), Expect = 3e-11, Method: Composition-based stats. Identities = 70/495 (14%), Positives = 151/495 (30%), Gaps = 76/495 (15%) Query: 226 SAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHM--PWLPFLLILLPANIM 283 S + P+ + L + +++ D L RT + L A ++ Sbjct: 9 SLWQHPQRALIIAVLYGAAGLLWILSTDSLLQTWLRTEVSVWQWSTLKEIFYFFLSAVVL 68 Query: 284 TMVMYAFRAERKHISESETHFRNAMEYSAIG----MALVGTEG-QWLQTNKALCQFLGYS 338 +++ ++ + ++ + + G + LV + + L N A Sbjct: 69 YVLLRQWQILQTLRHANQEQRLQQLLHLLDGNPWPLWLVEPQTLRILDRNAAATA----- 123 Query: 339 QEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVR 398 + + + ++L Q +++ + + NG + L Sbjct: 124 --------WGNVAYLQELAPRSQLLKQWAENP-DALRLSLDLKIPNGQLRSVELQRCAYP 174 Query: 399 HTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRM 458 P ++ D +L+ +Q +G WE +++ + + Sbjct: 175 D----PGAWLIAARDCGDLQSWQQ--------------LTQVGYWELDVQSQLVQTSPLV 216 Query: 459 FELYEIPPHIKP-NWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRH-I 516 L P +WQ W E DR E+ I +Q+ P + + + R + Sbjct: 217 NRLLGKPSDQCLFSWQQWLEHFQLSDRLRLEQAIDTGMQTGRPIQATYALASDSQDRQLV 276 Query: 517 RALANRVLNKEGEVERLLGINMDMTEV-KQLNEALFQEKER---LHITLDSIGEAVVCID 572 A V + G V L G+ + E L + L L++I + + D Sbjct: 277 ELRAVIVRDLAGNVRSLRGVLEPKHQAPLTSLEPLPLSLDHPAVLRRILEAIPDPIYIKD 336 Query: 573 MAMKITFMNPVAEKMSGWTQEEALGV-PLLTVLHITFGDNGPLMENIYSADTSRSAIEQD 631 +I N + + E + + + I G P++ ++ + Sbjct: 337 YRGEILLQNRACLDLQPFVMPEVIKQEDINDLATIASG--LPIINEEWT--INPENWPSQ 392 Query: 632 VVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLA 691 L + PL G +G + + ++VT R+ + Sbjct: 393 HFLISK-----------VPLRNELGQILGLLGIRRNVTRWRRAEQA-------------- 427 Query: 692 NRASFEKQLRILLQT 706 R + QL L Sbjct: 428 -RNALSDQLEQTLAA 441 >UniRef50_Q2BPB1 Regulatory component of sensory transduction system n=2 Tax=Gammaproteobacteria RepID=Q2BPB1_9GAMM Length = 885 Score = 820 bits (2118), Expect = 0.0, Method: Composition-based stats. Identities = 137/708 (19%), Positives = 267/708 (37%), Gaps = 33/708 (4%) Query: 410 QIEDINELKRTEQVNQQLME-------RITLANEAGGIGIWEWELKPNIFSWDKRMFELY 462 + E + E+ + + +A I+ + + +K Sbjct: 184 ILSRQEERRLAERELHISRQILNRERGLLRGLIDALPDHIFIKDKEGKYLGCNKAFQSFT 243 Query: 463 EIPPHIKPNW--QVWYECVLP--EDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRA 518 Q + E + + + +R + E + + Sbjct: 244 GHQEADLIGKTDQDFSESNHAITDKSDTLQVINNLLPINREAWTHEQ----DGSPILLES 299 Query: 519 LANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKIT 578 L+ +GE + ++GI+ D+TE ++ E + L ++ +VV ++ ++ Sbjct: 300 QLAPFLDMDGEPQGIVGISRDITEKRKAEERILT----LSQAVEQSPVSVVITNLKGEVE 355 Query: 579 FMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRS 638 ++N E ++G++Q E LG + + ++++ + + + ++ Sbjct: 356 YVNSTFESVTGYSQAEVLGKDSSILK--SGKTPPGRYADMWAKLVQGESWQGEFQNKKKN 413 Query: 639 GGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEK 698 G + I P+ +G + V QDVT+ + ++ + A D LT L NR Sbjct: 414 GEIFWEQAHIAPVLDAEGEVRHFLAVKQDVTKQKAQEEKILHQAHFDGLTELPNRFLAMH 473 Query: 699 QLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLA 758 +L ++ + A++F+D+D FK VND+ GH GD +L E A + +R SD + Sbjct: 474 RLETMMHEAKRNQHQIAVLFLDMDDFKKVNDTLGHDMGDKILVEAAKRLQGSVRDSDTIG 533 Query: 759 RLGGDEFGLLLPDCN-VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQ 817 RLGGDEF +L+ E A IA ++ +GR + S GI L + Sbjct: 534 RLGGDEFIVLINHLERPEQALPIAQNLLQQFRSS-LTIDGRDILLTMSIGIALYPGDGTT 592 Query: 818 AAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHG 877 +E++ AD A Y SK GR Y + + R + ++ + N+L +L Sbjct: 593 PSELLRNADSAMYHSKAAGRNSFHFYTQEMNIEANRRLQLE-EQLHNALDRNELRLLYQP 651 Query: 878 VASPRIPEARNLWLISLKLWSC-EGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAK 936 V + + + +L W E I + F L + + V + + ++ Sbjct: 652 VVDLK--TRKIVGAEALLRWDSKELGAISPEEFIPVAEHTGLIVEIGKFVLDDALRTTSR 709 Query: 937 AVAS--KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH----A 990 + + I++ LS L++++ + + L R L L I ++ Sbjct: 710 WIKTFIPDFHIAINLSPRQFRDPHLIDNIESFVNSYGLEGRNLELEITEGVLMSQHADVE 769 Query: 991 ESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQ 1050 E++ KL G I + G + L++ + L +D ++ + D L+ Sbjct: 770 EAIAKLTQKGISISMDDFGTGYSSLSYLRSYPFNILKVDRSFINDISVDAADLELVNASI 829 Query: 1051 GHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 A LG+K IA V L D+ G + P D L Sbjct: 830 DMAHGLGLKVIAEGVETEEQTALLLRKNCDMAQGYYFSKPIPADELEE 877 Score = 187 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 76/470 (16%), Positives = 158/470 (33%), Gaps = 44/470 (9%) Query: 105 AVLLRKLLPWYN-PLQNLADWLRLALGSAIVPPLLGGVLV---VLLTPGDDPLRAF-LIW 159 A+LL + + + LQN+ + I+ LLG ++ L PG + LI Sbjct: 14 ALLLAMGIVYDSLGLQNIHQRFLREGITGILVGLLGMAVMLTPWELIPGVFFDARWVLIS 73 Query: 160 VLSESIGALALVPLGLLFKPHYLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFI 219 + G + + ++ L + + +++ + + L W + + Sbjct: 74 LCGLYFGVIPTLIAVVMTVTLRLYQGGAGIYVGSAVIICSALIGLGWRAYIEKHNKA--- 130 Query: 220 IVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLP 279 L W + + L+ + V +M P L ++ + + + + Sbjct: 131 ---LTW-------WRLYFLGLSVQITVLCLMFFMPEHLRYKIIAAIAPTILIFYPIGTML 180 Query: 280 ANIMTMVMYAFRAERKHISESET-------HFRNAMEYSAIGMALVGTEGQWLQTNKALC 332 ++ R + + S R ++ + + EG++L NKA Sbjct: 181 LGMILSRQEERRLAERELHISRQILNRERGLLRGLIDALPDHIFIKDKEGKYLGCNKAFQ 240 Query: 333 QFLGYSQEELRGLTFQQLTWPEDL----NKDLQQVEKLISGEINTYSMEKRYYNRNGDVV 388 F G+ + +L G T Q + + LQ + L+ ++ E ++G + Sbjct: 241 SFTGHQEADLIGKTDQDFSESNHAITDKSDTLQVINNLLPINREAWTHE-----QDGSPI 295 Query: 389 WALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELK 448 ++ DG P + DI E ++ E+ ++ A E + + LK Sbjct: 296 LLESQLAPFLDMDGEPQGIVGISRDITEKRKAEERILT----LSQAVEQSPVSVVITNLK 351 Query: 449 PNIFSWDKRMFELYEIPPHIKPNWQ--VWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFR 506 + + + + P R + L ++ EF+ Sbjct: 352 GEVEYVNSTFESVTGYSQAEVLGKDSSILKSGKTPPGR---YADMWAKLVQGESWQGEFQ 408 Query: 507 ITVKDGIRHIR-ALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKE 555 K+G A VL+ EGEV L + D+T+ K E + + Sbjct: 409 NKKKNGEIFWEQAHIAPVLDAEGEVRHFLAVKQDVTKQKAQEEKILHQAH 458 Score = 119 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 78/234 (33%), Gaps = 7/234 (2%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + E++ E A+E S + + + +G+ N GYSQ E+ G Sbjct: 317 ISRDITEKRKAEERILTLSQAVEQSPVSVVITNLKGEVEYVNSTFESVTGYSQAEVLGKD 376 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 L + + + + ++ E + +NG++ W ++ V +G + Sbjct: 377 SSILKSGKTPPGRYADMWAKLV-QGESWQGEFQNKKKNGEIFWEQAHIAPVLDAEGEVRH 435 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGG-IGIWEWELKPNIFSWDKRMFELYEIP 465 F+A +D+ + K E+ L + + E + ++ + + Sbjct: 436 FLAVKQDVTKQKAQEEKILHQAHFDGLTELPNRFLAMHRLETMMHEAKRNQHQIAVLFLD 495 Query: 466 PHIKPN-----WQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIR 514 + +L E + + +RDS EF + + R Sbjct: 496 MDDFKKVNDTLGHDMGDKILVEAAKRLQGSVRDSDTIGRLGGDEFIVLINHLER 549 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 820 bits (2118), Expect = 0.0, Method: Composition-based stats. Identities = 165/909 (18%), Positives = 301/909 (33%), Gaps = 103/909 (11%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + + +++ + E ++ ++ A + T+G L N+ + EE+ G Sbjct: 47 ITTEVSSLENLKQEEQGLKDYIDNLITLNAKLSTDGTVLLINETALRTFHMQPEEVVGKK 106 Query: 347 FQQ---LTWPEDLNKDLQ-QVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDG 402 ++ DL+ L+ V++ +G+ Y E + +G ++ ++ V + + Sbjct: 107 LWDTPWWSYDADLHTQLKNAVKQAATGQTIYY--ETINHLVSGKKIYIYFTLNPVLNKNN 164 Query: 403 TPLYFIAQIEDINELKRTEQ----------------------------VNQQLMERITLA 434 +Y +A+ DI + K EQ ER+ Sbjct: 165 EVIYLVAEGRDITKRKMIEQDLISTNQELVAANEELISIEEELRISNKEIYLAHERLNNI 224 Query: 435 NEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYEC-----------VLPED 483 E+ + + + + +L +W E + Sbjct: 225 LESITDAFYAVNHQWEVTYVNTEAEKLLHKKRLDIIGKNIWQEFSEMVHTKFYHILHQVM 284 Query: 484 RQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEV 543 + + Q + DG+ + ++ + E Sbjct: 285 SEQIYQQFEYFFQPTGKWFNIHAYPSSDGLSIYFHDITEYKLVQEKMSLQNQYLSSLHET 344 Query: 544 KQLNEALFQEKERLHITLDSIGEA-------VVCIDMAMKITFMNP----VAEKMSGWTQ 592 E L + E + ID + ++M G Sbjct: 345 TLALMNRLNLDELLKAIVTRSAELSGTDHGFIFLIDNNNPSELVLRFGTGTYKQMVGIRL 404 Query: 593 ---EEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRS--------GGS 641 E +G T + D S+ S I + L +S G Sbjct: 405 KPGEGMVGTVWQTGEPLIVKDYSSWPGK--SSIFSHIKIHGGIALPLKSEGKINGILGII 462 Query: 642 YDV-----------------HYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASH 684 Y + L + Q++ E +++ L Y A H Sbjct: 463 YIEKNQNLESNNLSLLTGFAQLASIALDNAN----LYQAAQQELAERKRIEEILRYLAYH 518 Query: 685 DALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELA 744 D+LT L NR F +L + L + + A++F+DLD FK VND+ GH GD LL+ +A Sbjct: 519 DSLTELPNRTLFNDRLSMALNQAHRNKNKLAVMFLDLDHFKKVNDTLGHDIGDQLLKGIA 578 Query: 745 SLMLSMLRSSDVLARLGGDEFGLLLPDCN-VESARFIATRIISAVNDYHFIWEGRVHRVG 803 +LR D +AR+GGDEF +LL + E+A +A +II + +I + Sbjct: 579 QRFSKLLRKGDTIARIGGDEFTILLHNITRAENASIVADKIIDTLA-NPWIIGNHEFHIT 637 Query: 804 ASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQW 863 S GI L D+ A ++ AD A Y +K GR Y P A R + + + Sbjct: 638 TSIGIALYPDDGTDAESLLKNADAAMYQAKEMGRNNYQFYTPTMNAQTLRRFELENNLR- 696 Query: 864 RMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHAL 922 R + + ++ I + + + +L W + +I F + L + Sbjct: 697 RALDRKEFVIYYQPQV--EIHTGKIVGVEALIRWQHPQRGMISPAEFIPMAEETGLIIPI 754 Query: 923 DRRVFHEFFQQAAKAVASK--GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLI 980 + Q + +++ LS L + LE++ L P+ L L Sbjct: 755 GEWILRRACAQNKAWQDRGFSPMRVTVNLSARQFLQPHLPQYISNVLEDTGLGPQWLELE 814 Query: 981 IPAEAILDHAE----SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANV 1036 I + ++ +LR G + + G N LK D L +D ++ Sbjct: 815 ITESLAMKDVAFTEKTLIELRKMGITLAIDDFGTGYSSLNYLKRLPIDILKIDRSFIHDL 874 Query: 1037 QGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 D +I+ I L MK +A V + L DL+ G + P+ L Sbjct: 875 NTESDDVAIISAIITLGHNLKMKVVAEGVETKEQLMFLRQQQCDLMQGYLFTKPLPVREL 934 Query: 1097 VNSSYFAIN 1105 Y + N Sbjct: 935 -EQKYLSNN 942 >UniRef50_A0L8C6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=A0L8C6_MAGSM Length = 720 Score = 819 bits (2116), Expect = 0.0, Method: Composition-based stats. Identities = 136/690 (19%), Positives = 248/690 (35%), Gaps = 32/690 (4%) Query: 431 ITLANEAGGI--GIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAE 488 E G + + I + + + Q + + Sbjct: 21 DKHTLEQNGRTPLVMVVDDDTAIQTLLCHFMKKIGWSYVTAMHGQEAIDLIPKCQPDVIL 80 Query: 489 KVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGI-----------N 537 + + F+ RI HI+ L L + + + Sbjct: 81 --MDAKMPVLDGFEACKRIKENPVTAHIQVLIITSLEDDESINHAYEVGASDYVPKPIHW 138 Query: 538 MDMTEVKQLNEALFQEKERL---HITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEE 594 + + Q + + +L ++ E +V D IT +NP E ++G+ + Sbjct: 139 VSLQNRVQFLYKMMVAERQLMLTAKVFENTTEGIVVTDSTACITNVNPSFEAITGYDRGS 198 Query: 595 ALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTL 654 LG + + + + ++ + + +V ++G Y +I+ + T Sbjct: 199 VLGQNISILQ--SGRHDRRFYGKMWQTLLTAGKWQGEVWNRRKNGEIYPQWVNISAIRTG 256 Query: 655 DGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRH 714 DG V V D+T ++ L Y + HDALT L NR F +L L + Sbjct: 257 DGQTESYVGVFTDLTRIKESEENLLYLSGHDALTELPNRLLFHDRLNQTLVESADSGSIV 316 Query: 715 ALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNV 774 A++ +DLDRFK +NDS GH GD+LL E+A+ + ++ + LARLGGDEFG++LP+ Sbjct: 317 AVLIVDLDRFKVINDSMGHEVGDSLLCEVATRLRAICPAKATLARLGGDEFGIVLPNMTQ 376 Query: 775 E-SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASK 833 A +A +++ V VGAS G+T+ + + + +M A+ A Y +K Sbjct: 377 NRDAALLAQEVLTRVAQ-PITISEVEFAVGASIGMTVYPLDGEKPSVLMRNAESAMYHAK 435 Query: 834 NGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLIS 893 GR Y + A R + + + + ++ + + + + + Sbjct: 436 QSGRNNFQFYRSELNTASLARILLESGLR-NAVDRQEFLLFYQPQM--ELATGKLIGMEA 492 Query: 894 LKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK--GISISLPLS 950 L W E ++ F + L + + E +Q+ + + IS+ LS Sbjct: 493 LIRWQHPEQGMVSPGEFIPLAEETGLVIPMGQWALKEACRQSKVWMDQTGVPLRISVNLS 552 Query: 951 VAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRLAGCRIVLS 1006 ++ + S LPP L L + + E + L G + + Sbjct: 553 GIQFRLPDFTEMVMRTVGESGLPPHCLELELTESIAMGDVEETLEKLTILSRFGVLLAID 612 Query: 1007 QVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVV 1066 G + LK D L +D N + D +I A L ++ IA V Sbjct: 613 DFGTGFSSLSYLKKFPIDTLKIDQSFVRNCTRDPEDAAIIRAFINLAHSLNLEVIAEGVE 672 Query: 1067 LPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 ++ L+ D I G D Sbjct: 673 HLEQLEFLAQESCDEIQGYFYGRPLSGDKF 702 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 27/246 (10%), Positives = 70/246 (28%), Gaps = 4/246 (1%) Query: 297 ISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDL 356 E + G+ + + N + GY + + G L Sbjct: 154 AERQLMLTAKVFENTTEGIVVTDSTACITNVNPSFEAITGYDRGSVLGQNISILQSGRHD 213 Query: 357 NKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINE 416 + ++ + + + E +NG++ + +S +R DG ++ D+ Sbjct: 214 RRFYGKMWQTLL-TAGKWQGEVWNRRKNGEIYPQWVNISAIRTGDGQTESYVGVFTDLTR 272 Query: 417 LKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWY 476 +K +E+ L L + + + + ++V Sbjct: 273 IKESEENLLYLSGHDALTELPNRLLFH--DRLNQTLVESADSGSIVAVLIVDLDRFKVIN 330 Query: 477 ECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLG- 535 + + E + L++ P K D + + + + +L Sbjct: 331 DSMGHEVGDSLLCEVATRLRAICPAKATLARLGGDEFGIVLPNMTQNRDAALLAQEVLTR 390 Query: 536 INMDMT 541 + +T Sbjct: 391 VAQPIT 396 Score = 63.2 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 25/201 (12%), Positives = 65/201 (32%), Gaps = 24/201 (11%) Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELY 462 P+++++ + L + ++ + E GI + I + + + Sbjct: 134 KPIHWVSLQNRVQFLYKMMVA-ERQLMLTAKVFENTTEGIVVTDSTACITNVNPSFEAIT 192 Query: 463 EIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRAL-AN 521 + DR + +L + ++ E K+G + + + + Sbjct: 193 GYDRGSVLGQNISILQSGRHDR-RFYGKMWQTLLTAGKWQGEVWNRRKNGEIYPQWVNIS 251 Query: 522 RVLNKEGEVERLLGINMDMTEVKQLNE----------------ALFQEKERLHITLDS-- 563 + +G+ E +G+ D+T +K+ E L ++S Sbjct: 252 AIRTGDGQTESYVGVFTDLTRIKESEENLLYLSGHDALTELPNRLLFHDRLNQTLVESAD 311 Query: 564 --IGEAVVCIDMAMKITFMNP 582 AV+ +D+ + +N Sbjct: 312 SGSIVAVLIVDLD-RFKVIND 331 >UniRef50_C4ZM30 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZM30_THASP Length = 1002 Score = 818 bits (2115), Expect = 0.0, Method: Composition-based stats. Identities = 146/694 (21%), Positives = 274/694 (39%), Gaps = 27/694 (3%) Query: 418 KRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYE 477 R+ + + ++ W + + ++R EL P + W + Sbjct: 316 HRSRRQLARSKRSFDALIDSRREATCAWRPDTTLLTCNERYAELLGTEAASLPGTR-WID 374 Query: 478 CVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLNKEGEVERLLGI 536 V R I LQ + R+ DG R +R L VL++EG + I Sbjct: 375 NVPEAKRAEVHAAIARMLQGAGTLTTDRRLRQADGRTRWLRWLDLPVLDEEGRCVEVHSI 434 Query: 537 NMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEAL 596 D+T K++ L +L + ++ +V D +I ++N + +G+T EA+ Sbjct: 435 GQDITAQKEVELRL----RQLALAVEQSPNTIVITDTDGRIEYVNEAFVRTTGYTAAEAI 490 Query: 597 GVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDG 656 G + + ++++ + + + GG+Y +I P+ DG Sbjct: 491 GQNPRLL--NAGKTSAATYADLWATLGRGEVWRGEFINTRKDGGTYTELATIAPIKQADG 548 Query: 657 SNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHAL 716 S V + +D+T R+ ++ A +D LT L NR+ +LR + + L Sbjct: 549 SVSHYVAIKEDITGRREAEARIRQLAYYDTLTGLPNRSLMWDRLRHAIAASARSGASGML 608 Query: 717 VFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC--NV 774 + +D+D FK +ND+ GH GDALLRE+A + LR D +AR+G D+F +++ + + Sbjct: 609 MLLDIDHFKLLNDTQGHEVGDALLREVAQRLRGALREEDTVARVGDDDFAIVVENLGADR 668 Query: 775 ESARFIATRIISAVND---YHFIWE--GRVHRVGASAGITLIDDNNHQAAEVMSQADIAC 829 + A A +I ++ + VGAS G+TL N A V+ QA++A Sbjct: 669 DEAIGRAEKIAEHLHRCVTAPCELGLASGPYHVGASLGLTLFRGRNAAADAVLKQAEVAV 728 Query: 830 YASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNL 889 +K+ GR + + A + RA + L + + N + R + Sbjct: 729 ARAKDDGRNLIRFFSEAMQAVVAARAELELKLR-AALACNGFRLYYQPQLD---RNGRVI 784 Query: 890 WLISLKL-WSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK---GISI 945 +L + EGE+I F + L + V Q + G+S+ Sbjct: 785 GAEALIRCFDAEGEMISPAAFIPLAEETGLIVPIGEWVLETACAQLRAWQRTPSTAGLSL 844 Query: 946 SLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGC 1001 S+ +S V + +E + P L + + ++ E +++++ G Sbjct: 845 SINVSARQFHQPDFVGKVAAAIERHRIRPGGLEIELTESVVIGDIETTVLRMRQIKALGV 904 Query: 1002 RIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTI 1061 R L G + LK D L +D +++ + E ++ I ++ L +K + Sbjct: 905 RFALDDFGTGYSSLSYLKRLPFDQLKIDQMFVRDMEKDTSSEAIVRAILALSRSLDLKVV 964 Query: 1062 AGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDL 1095 A V + L G +L G + P++ Sbjct: 965 AEGVETAAQHELLLTRGCELFQGYLFGRPVPIED 998 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 37/248 (14%), Positives = 82/248 (33%), Gaps = 4/248 (1%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + +K + A+E S + + T+G+ N+A + GY+ E G Sbjct: 434 IGQDITAQKEVELRLRQLALAVEQSPNTIVITDTDGRIEYVNEAFVRTTGYTAAEAIGQN 493 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 + L + + + G + E ++G L ++ ++ DG+ + Sbjct: 494 PRLLNAGKTSAATYADLWATL-GRGEVWRGEFINTRKDGGTYTELATIAPIKQADGSVSH 552 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP 466 ++A EDI + E +QL TL +W + + + R + Sbjct: 553 YVAIKEDITGRREAEARIRQLAYYDTLTGLPNRSLMW--DRLRHAIAASARSGASGMLML 610 Query: 467 HIKPNWQVWYECVLPEDRQHAEKVIRDSLQSR-SPFKLEFRITVKDGIRHIRALANRVLN 525 ++++ + E + + L+ R+ D + L Sbjct: 611 LDIDHFKLLNDTQGHEVGDALLREVAQRLRGALREEDTVARVGDDDFAIVVENLGADRDE 670 Query: 526 KEGEVERL 533 G E++ Sbjct: 671 AIGRAEKI 678 Score = 75.5 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 40/394 (10%), Positives = 102/394 (25%), Gaps = 36/394 (9%) Query: 294 RKHISESETHFRNAMEYSAIG--MALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 + + + ++ + + +G+ L L Sbjct: 90 EASLVQLQLELQHLARGFPEAVAILVTDAQGKILA---------------------STLD 128 Query: 352 WPEDLNK-DLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQ 410 P + D + + + + + G ++A +R+ G + +A Sbjct: 129 TPPQWDIGDREYFRHAREHRQDALAFSEPVIYKAG-PREVVVAYEAIRNPAGDFVGVVAV 187 Query: 411 IEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDK--RMFELYEIPPHI 468 D+ L+ + + + + I Sbjct: 188 ALDLQRLQDLLLGVDAGRQGMVSIRRSDDGRLVLRLPDHGASRVADITSTEPFLAIRRGE 247 Query: 469 KPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEG 528 + +R A + +RD + + R + + + Sbjct: 248 TSGSARYVGIADEVERSFAFQALRDYPF----YVVIGRAISEQFAPWRQTATVATIIALA 303 Query: 529 EVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMS 588 + LL + + + L + K +DS EA + N ++ Sbjct: 304 TLGLLLALQA---ALHRSRRQLARSKRSFDALIDSRREATCAWRPDTTLLTCNERYAELL 360 Query: 589 GWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSI 648 G G + ++ + I + D L G + + + Sbjct: 361 GTEAASLPGT--RWIDNVPEAKRAEVHAAIARMLQGAGTLTTDRRLRQADGRTRWLRWLD 418 Query: 649 TPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSA 682 P+ +G + + QD+T +++ +L A Sbjct: 419 LPVLDEEGRCVEVHSIGQDITAQKEVELRLRQLA 452 >UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4R7_HERAR Length = 859 Score = 817 bits (2112), Expect = 0.0, Method: Composition-based stats. Identities = 129/562 (22%), Positives = 226/562 (40%), Gaps = 17/562 (3%) Query: 542 EVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLL 601 E KQ + +L ++ A++ D+ I + N +G+ + +G Sbjct: 298 ERKQSEVFM----RKLSQAVEQSSNAIIITDLNGTIEYANTTFSTNTGYALHDIIGKKPN 353 Query: 602 TVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGS 661 H + + ++++ + + + + +G ++P+ DG Sbjct: 354 M--HKSGKTSRATYADMWAHLGRGESWQGEFINRRHNGEERIDLVRVSPVREADGRITHY 411 Query: 662 VLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDL 721 + + +D+T + ++ A D LT L NRA +++ + L+ A++F+DL Sbjct: 412 LAIEEDITNQKNAQARIESLAHFDVLTGLPNRALLDERAQRALRLAEEDQATLAVMFLDL 471 Query: 722 DRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIA 781 D FK +ND+ GH GD LL ELA + ++LR D L+RLGGDEF LLLP N ESA+ IA Sbjct: 472 DHFKNINDTLGHNLGDTLLVELAQRLRAVLRRDDTLSRLGGDEFVLLLPGANRESAKKIA 531 Query: 782 TRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVT 841 ++ A+N+ + V AS GI + + + AD+A Y +K GR Sbjct: 532 QELMRAINE-PYRIGSHELNVMASIGIAVYPADGMDFETLCKNADVAMYRAKQEGRNAYR 590 Query: 842 VYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCE 900 + + A + + L+ + I + QL + S + +L W E Sbjct: 591 SFTQEMQAYSTRYLQV-LNALRQAIAQEQLHVHYQPQISLI--SGDVIGAEALLRWHHPE 647 Query: 901 GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKG--ISISLPLSVAGLSSAT 958 I F + L + V QA K + I++ LS A Sbjct: 648 LGNISPAEFIPIAEESGLILQIGEWVLRVAVAQAKKWHQLGLDKLIIAVNLSAVQFRHAG 707 Query: 959 LVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLSQVGRDLQI 1014 L N +++ L+ PP+ L L + + + + L G R+ + G Sbjct: 708 LPNLVMQILKEEDFPPQYLELELTEGVAMHDPQGAIAMMNSLHERGVRMSIDDFGTGYSS 767 Query: 1015 FNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTL 1074 + LK A L +D ++ + D+ +++ I G A+ LG++TIA V L Sbjct: 768 LSYLKQFKAYKLKIDQSFVRDISTDAEDKAIVSAIIGMAKNLGLQTIAEGVETAEQQAFL 827 Query: 1075 SGIGVDLIYGEVIADAQPLDLL 1096 G G + P Sbjct: 828 REEGCHEAQGYHYSKPLPAADF 849 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 41/272 (15%), Positives = 77/272 (28%), Gaps = 15/272 (5%) Query: 251 AADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEY 310 A+ L A + P L +L A + + + A+E Sbjct: 260 ASAQILGALTVYHREPFQPSESDLQLLETATHFLAIAIERKQSEVFMR----KLSQAVEQ 315 Query: 311 SAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGE 370 S+ + + G N GY+ ++ G + + + G Sbjct: 316 SSNAIIITDLNGTIEYANTTFSTNTGYALHDIIGKKPNMHKSGKTSRATYADMWAHL-GR 374 Query: 371 INTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMER 430 ++ E NG+ L+ VS VR DG +++A EDI K + + L Sbjct: 375 GESWQGEFINRRHNGEERIDLVRVSPVREADGRITHYLAIEEDITNQKNAQARIESLAHF 434 Query: 431 ITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLP--------E 482 L + E + + +++ + + E Sbjct: 435 DVLTGLPNRALLDE--RAQRALRLAEEDQATLAVMFLDLDHFKNINDTLGHNLGDTLLVE 492 Query: 483 DRQHAEKVIRDSLQSRSPFKLEFRITVKDGIR 514 Q V+R EF + + R Sbjct: 493 LAQRLRAVLRRDDTLSRLGGDEFVLLLPGANR 524 Score = 59.7 bits (144), Expect = 6e-07, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 52/193 (26%), Gaps = 29/193 (15%) Query: 404 PLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYE 463 +F+A E K++E ++ ++ A E I +L I + Sbjct: 289 ATHFLAIAI---ERKQSEVFMRK----LSQAVEQSSNAIIITDLNGTIEYANTTFSTNTG 341 Query: 464 IPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEF-RITVKDGIRHIRALANR 522 H + R + L ++ EF R + Sbjct: 342 YALHDIIGKKPNMHKSGKTSRAT-YADMWAHLGRGESWQGEFINRRHNGEERIDLVRVSP 400 Query: 523 VLNKEGEVERLLGINMDMTEVKQLNEA------------------LFQEKERLHITLD-- 562 V +G + L I D+T K L + +R + Sbjct: 401 VREADGRITHYLAIEEDITNQKNAQARIESLAHFDVLTGLPNRALLDERAQRALRLAEED 460 Query: 563 SIGEAVVCIDMAM 575 AV+ +D+ Sbjct: 461 QATLAVMFLDLDH 473 >UniRef50_D2M1V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2M1V4_BACS4 Length = 840 Score = 817 bits (2112), Expect = 0.0, Method: Composition-based stats. Identities = 172/816 (21%), Positives = 339/816 (41%), Gaps = 21/816 (2%) Query: 295 KHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPE 354 + +E +++ + + + + N A GY EE F Sbjct: 25 DELLRTEQRYKSLFHNNPTPIFTMNSSFMLDSCNDAFYILTGYLIEE-IHDNFHTFIRKS 83 Query: 355 DLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDI 414 ++K ISGE N + N+ G + LL++ + + I DI Sbjct: 84 QQAYTTDCMKKAISGEAN--QLNIFIVNKQGKEIEVLLSLIPIT-VNERIEGIYGVIRDI 140 Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP--HIKPNW 472 ++L+ E+ + + A IG W+++ + W K+MF ++ + + P+ Sbjct: 141 SQLRIYEKNLSFIERSLNNAQYIANIGSWDYDPHNDKLYWSKQMFRIFGLDEKTNTAPSM 200 Query: 473 QVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGI-RHIRALANRVLNKEGEVE 531 + + + V +DR I+D+++ + F E RI KDG+ R ++ N +++ EG V Sbjct: 201 EQYLKYVHHDDRLRDIVAIQDAMEKKKSFNYESRIFRKDGMKRIVKIQGNPIIDNEGNVV 260 Query: 532 RLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMK-ITFMNPVAEKMSGW 590 +++G D+TE K+ N+ L +++ I +++ E + ID++ + + F + E++ G+ Sbjct: 261 KIIGNTHDITEQKEANQRLVDNEKQARIIFNNLDEIIWSIDISSRKVIFCSNGFEQLFGY 320 Query: 591 TQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITP 650 ++ + L I D + E + + + ++ + + S + P Sbjct: 321 CLDDLIDERQLWQKVIHEEDIKGIPEKLI-TLSQGNQLKFECRVQHTSAEVRWIEIKALP 379 Query: 651 LSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNST 710 + G I +I+D+TE +K+ ++ + A HD LT+L NR SF+ +L L+ T Sbjct: 380 IIDDLGDFIRVDGIIRDITEKKKLDAKMHHIAHHDHLTNLPNRRSFDIKLHELIHHAKKT 439 Query: 711 HQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLP 770 ++ ++D+DRFK VND GH GD LL+E++ + +L S +AR GDEF +LL Sbjct: 440 KSIFSVFYLDIDRFKHVNDMLGHNYGDDLLKEISYRLKQVL-QSHFIARTSGDEFAVLLH 498 Query: 771 DCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACY 830 D E A I++ + F V AS GI + A ++ AD A Sbjct: 499 DVTEEEVIVFAHNIVNVMRQA-FHISEVESYVTASIGIAFYPKDGENAVTLLKNADTALS 557 Query: 831 ASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLW 890 +K G+ Y P+ + D + +++ + + + + + Sbjct: 558 FAKIDGKDNYKHYIPEMNEDSHNIYFLEKDMRL-ALEKEEFYLEYQPKIDVK--TKKVIG 614 Query: 891 LISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV--ASKGISISL 947 +L W + I+ F + L + V + +Q K + +S+ Sbjct: 615 CEALIRWTHPKRGIVSPAQFIPIAEESDLICDIGNWVIKKVCKQLKKWHLEGINTVPVSI 674 Query: 948 PLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRI 1003 +S L +L++ + L+ + + P LL L I +++ + +++ L+ G ++ Sbjct: 675 NISAQHLLKTSLLDTIFTALKANHVSPSLLELEITETSLIQPNQSVFSTIRSLKKLGVKL 734 Query: 1004 VLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAG 1063 L G ++ D L +D + V D ++I+ I A LG+ +A Sbjct: 735 SLDDFGVGYSSLTHIRKFPLDTLKIDKSFISKVPTEKDDAVIISSIIEMAHGLGLTILAE 794 Query: 1064 PVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNS 1099 V + L D I G + + D + Sbjct: 795 GVETEEQLLFLEEKNCDHIQGFLFSKPISNDHFKQA 830 Score = 144 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 47/278 (16%), Positives = 105/278 (37%), Gaps = 8/278 (2%) Query: 280 ANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQ 339 + + R K++S E NA + IG L +K + + G + Sbjct: 133 IYGVIRDISQLRIYEKNLSFIERSLNNAQYIANIGSWDYDPHNDKLYWSKQMFRIFGLDE 192 Query: 340 EELRGLTFQQ---LTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSL 396 + + +Q +D +D+ ++ + + +++ E R + ++G + + Sbjct: 193 KTNTAPSMEQYLKYVHHDDRLRDIVAIQDAME-KKKSFNYESRIFRKDGMKRIVKIQGNP 251 Query: 397 VRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPN-IFSWD 455 + +G + I DI E K Q ++ + IW ++ + Sbjct: 252 IIDNEGNVVKIIGNTHDITEQKEANQRLVDNEKQARIIFNNLDEIIWSIDISSRKVIFCS 311 Query: 456 KRMFELYEIPPHIKPN-WQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITV-KDGI 513 +L+ + Q+W + + ED + + + +L + K E R+ + Sbjct: 312 NGFEQLFGYCLDDLIDERQLWQKVIHEEDIKGIPEKLI-TLSQGNQLKFECRVQHTSAEV 370 Query: 514 RHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALF 551 R I A +++ G+ R+ GI D+TE K+L+ + Sbjct: 371 RWIEIKALPIIDDLGDFIRVDGIIRDITEKKKLDAKMH 408 Score = 103 bits (257), Expect = 5e-20, Method: Composition-based stats. Identities = 32/275 (11%), Positives = 85/275 (30%), Gaps = 11/275 (4%) Query: 277 LLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQ-WLQTNKALCQFL 335 ++ T + + + + ++E R + + + + + Q Sbjct: 259 VVKIIGNTHDITEQKEANQRLVDNEKQARIIFNNLDEIIWSIDISSRKVIFCSNGFEQLF 318 Query: 336 GYSQEELRGLT--FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLA 393 GY ++L +Q++ ED+ +++ L + N E R + + +V W + Sbjct: 319 GYCLDDLIDERQLWQKVIHEEDIKGIPEKLITL--SQGNQLKFECRVQHTSAEVRWIEIK 376 Query: 394 VSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGI------WEWEL 447 + G + I DI E K+ + + L N Sbjct: 377 ALPIIDDLGDFIRVDGIIRDITEKKKLDAKMHHIAHHDHLTNLPNRRSFDIKLHELIHHA 436 Query: 448 KPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRI 507 K + ++ + + +L E ++V++ +R+ + Sbjct: 437 KKTKSIFSVFYLDIDRFKHVNDMLGHNYGDDLLKEISYRLKQVLQSHFIARTSGDEFAVL 496 Query: 508 TVKDGIRHIRALANRVLNKEGEVERLLGINMDMTE 542 + A+ ++N + + + +T Sbjct: 497 LHDVTEEEVIVFAHNIVNVMRQAFHISEVESYVTA 531 >UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A628_PELCD Length = 1063 Score = 817 bits (2111), Expect = 0.0, Method: Composition-based stats. Identities = 149/694 (21%), Positives = 274/694 (39%), Gaps = 26/694 (3%) Query: 414 INELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQ 473 I K+T Q +Q + E+ I + NI + +L+ + + Sbjct: 369 IMRYKKTLQALRQSEGTLKAMLESIADPIHMVDRDLNILWANDIAKQLFGKNLVGQKCYA 428 Query: 474 VWYECVLPEDRQHAEKVIRDSLQSRSPFKLE-FRITVKDGIRHIRALANRV-LNKEGEVE 531 + P D + E + D R AN + +G+ Sbjct: 429 ALHRSPTPCDP---MCHAIKAFSDGHAHSSENLFFDINDEERCFLVTANVASTDSQGQPS 485 Query: 532 RLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWT 591 +L I+ D+TE+K+ + Q K ++D+ ++ D+ ++T+ N A + G+ Sbjct: 486 AVLTISRDVTEIKKTQQQFHQAK----WSIDASLTPMLMADLQGRLTYANQAALDLWGYA 541 Query: 592 -QEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITP 650 +EE LG ++ ++ I +R + ++G +DV Sbjct: 542 GEEEVLGKNIVEFQ-----EDPQRTRIIMEILKARGVWRGEGRGKQKNGNGFDVELQAQV 596 Query: 651 LSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNST 710 + +G + + D+T+ RK Q+ A D+LT L NR + + + L Sbjct: 597 VKDQNGGPLSILASAIDITDKRKTELQIKKLAYFDSLTGLPNRTLLKDHMELALGQARRL 656 Query: 711 HQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLP 770 ++ A++ +DLD FK +ND+ GHA GD L+R +A + + R+ D LAR GGDEF LLL Sbjct: 657 NKFVAVLLLDLDNFKHINDTLGHATGDLLIRSVAERLRTECRTCDTLARWGGDEFVLLLT 716 Query: 771 DCNV-ESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIAC 829 D + ++ + ++ + + F AS GI L + ++ +AD A Sbjct: 717 DLDDIQNTTSATEKFMALLTERPFATSECDINTTASIGIALYPQDGQDPETLLKRADTAM 776 Query: 830 YASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNL 889 Y +K GR + Q A R M ++ + +KE ++ ++ + + R Sbjct: 777 YEAKKNGRNGYHFFSLQLAEQAERRHRMEINLR-SALKEGEMQLVYQPQID--LGKVRIT 833 Query: 890 WLISLKLWS-CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV--ASKGISIS 946 + +L W E I F + L + L V + +Q A + + ++ Sbjct: 834 GMEALLRWQSPEEGTISPARFIPLAEETGLIYPLGEWVLQQACRQGAIWQKTEASPLCVA 893 Query: 947 LPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH----AESVQKLRLAGCR 1002 + LS L ++ + L + L P LL L I L++ E++ +L+ G + Sbjct: 894 VNLSAKQFHQPDLAKNIKKILRETGLSPHLLELEITESVFLENMEAAIEALTELKKLGVQ 953 Query: 1003 IVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIA 1062 + G + LK D + + E ++ + D+ +I A+ LGMK IA Sbjct: 954 FSIDDFGTGYSSLSYLKKLPIDRIKIAQEFVRDIDTDDGDKAIIKATIAMAKSLGMKLIA 1013 Query: 1063 GPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 V + L G + G A P + Sbjct: 1014 EGVENHQQLAFLLLHGCHAMQGYYFAKPMPAQEV 1047 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 46/299 (15%), Positives = 112/299 (37%), Gaps = 15/299 (5%) Query: 259 TPRTYLMSHMPWLPFLLILLPANI---MTMVMYAFRAERKHISESETHFRNAMEYSAIGM 315 + + L+ + + +T+++ ++ + + +SE + +E A + Sbjct: 338 SSELSAHKRQVTIALLIAGVFLCLSCTLTLMIMRYKKTLQALRQSEGTLKAMLESIADPI 397 Query: 316 ALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYS 375 +V + L N Q G + L G D + + +S Sbjct: 398 HMVDRDLNILWANDIAKQLFG---KNLVGQKCYAALHRSPTPCDPMCHAIKAFSDGHAHS 454 Query: 376 MEKRYYNRNGDVVWALLAVSLV-RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLA 434 E +++ N + L+ ++ + G P + D+ E+K+T+Q Q Sbjct: 455 SENLFFDINDEERCFLVTANVASTDSQGQPSAVLTISRDVTEIKKTQQQFHQAKWS---- 510 Query: 435 NEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDS 494 +A + +L+ + ++ +L+ + + E ED Q ++I + Sbjct: 511 IDASLTPMLMADLQGRLTYANQAALDLWGYAGEEEVLGKNIVEF--QEDPQR-TRIIMEI 567 Query: 495 LQSRSPFKLEFRITVKDG-IRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQ 552 L++R ++ E R K+G + A V ++ G +L +D+T+ ++ + + Sbjct: 568 LKARGVWRGEGRGKQKNGNGFDVELQAQVVKDQNGGPLSILASAIDITDKRKTELQIKK 626 Score = 97.1 bits (241), Expect = 4e-18, Method: Composition-based stats. Identities = 38/252 (15%), Positives = 90/252 (35%), Gaps = 13/252 (5%) Query: 296 HISESETHFRNA---MEYSAIGMALVGTEGQWLQTNKALCQFLGYS-QEELRGLTFQQLT 351 I +++ F A ++ S M + +G+ N+A GY+ +EE+ G + Sbjct: 496 EIKKTQQQFHQAKWSIDASLTPMLMADLQGRLTYANQAALDLWGYAGEEEVLGKNIVEFQ 555 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 + + ++ K + E R +NG+ L +V+ +G PL +A Sbjct: 556 EDPQRTRIIMEILKA----RGVWRGEGRGKQKNGNGFDVELQAQVVKDQNGGPLSILASA 611 Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPN 471 DI + ++TE ++L +L + + +R+ + + N Sbjct: 612 IDITDKRKTELQIKKLAYFDSLTGLPNRTLL--KDHMELALGQARRLNKFVAVLLLDLDN 669 Query: 472 WQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVE 531 ++ + + + + + L++ D + + + N E Sbjct: 670 FKHINDTLGHATGDLLIRSVAERLRTECRTCDTLARWGGDEFVLLLTDLDDIQNTTSATE 729 Query: 532 RLLGINMDMTEV 543 + + + +TE Sbjct: 730 KFMAL---LTER 738 Score = 59.3 bits (143), Expect = 9e-07, Method: Composition-based stats. Identities = 45/266 (16%), Positives = 91/266 (34%), Gaps = 37/266 (13%) Query: 418 KRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYE 477 KR Q +L + + + I+ PN++ +D R + + I H P + Sbjct: 278 KRQGQEAARLA--LRILDGQEPRHIFPITQSPNLYMFDDRALQHFGIDRHQLPQDSIILN 335 Query: 478 CVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGIN 537 + E H +V L + L + Sbjct: 336 DMSSELSAHKRQVTIALLIAGVFLCLS-----------------------------CTLT 366 Query: 538 MDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALG 597 + + K+ +AL Q + L L+SI + + +D + I + N +A+++ G + +G Sbjct: 367 LMIMRYKKTLQALRQSEGTLKAMLESIADPIHMVDRDLNILWANDIAKQLFG---KNLVG 423 Query: 598 VPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSIT-PLSTLDG 656 LH + P+ I A + A + + + + + G Sbjct: 424 QKCYAALHRSPTPCDPMCHAI-KAFSDGHAHSSENLFFDINDEERCFLVTANVASTDSQG 482 Query: 657 SNIGSVLVIQDVTESRKMLRQLSYSA 682 + + +DVTE +K +Q + A Sbjct: 483 QPSAVLTISRDVTEIKKTQQQ-FHQA 507 >UniRef50_Q8DIH6 Tlr1612 protein n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DIH6_THEEB Length = 1292 Score = 817 bits (2110), Expect = 0.0, Method: Composition-based stats. Identities = 184/899 (20%), Positives = 333/899 (37%), Gaps = 35/899 (3%) Query: 227 AVRLPRMEAFLIFLTTVMMVSL---MMAADPSLLATPRTYLMSHMPWLPFLLILLPANIM 283 A+ A+L+ V + P RT + L + + + Sbjct: 396 AIAPAFPGAWLLIPLIVADRVWGSLTLFNYPEPHEWSRTEIDLARAVATQLEVAIYQATL 455 Query: 284 TMV----MYAFRAERKHISESETHFRNAMEYSAIGMALV----GTEGQWLQTNKALCQFL 335 + R + +SE FR + + N + Sbjct: 456 YQQAQQELAERRRIEATLRQSEECFRLTATNVPGAIFRYIQYPDGRNRVFYLNPMCERLW 515 Query: 336 GYSQEELR--GLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRN-GDVVWALL 392 G E G QL PED Q V + + + R + G++ W Sbjct: 516 GVPAEAAAEDGEHLWQLVHPEDREATWQSVLRSAETLTP-WFAQWRIIHPTTGEIRWLEG 574 Query: 393 AVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIF 452 A R DG ++ I D+ + E ++ ++ LA IG + +L F Sbjct: 575 AGQPTRDADGAVVWH-TVILDVTDRHLAEARLKEQQAQLELAARVSNIGFYFCDLHTGTF 633 Query: 453 SWDKRMFELYEIPPH-IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITV-K 510 P + N + W E + PEDR A R L+ + + ++ R+ Sbjct: 634 YVSPSYKAQLGYPATTQEVNLEDWEERLHPEDRDRALAAYRQFLRGEAHYSIDLRLRHCN 693 Query: 511 DGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVC 570 R + A + +++G+ +++G N+D+TE K AL + +ER + ++ + + Sbjct: 694 GTYRWFHSEAVLIHDEQGQPSKVVGTNVDITERKATELALRESEERYRLLAENTSDIICL 753 Query: 571 IDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQ 630 +D +++P E + GW E +G + H + + + + R Sbjct: 754 LDCQGSCLYVSPSYETLLGWPTETLIGEHFTQLCHP--EERSRVKQELQQMIEQRQFWPI 811 Query: 631 DVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHL 690 + G + + P G +DVT ++ QL + A HD+LT L Sbjct: 812 TYQVCTARGDVLWLETLVKPRYDSQGHVQQLQTTSRDVTSRVQVQMQLHHDAYHDSLTGL 871 Query: 691 ANRASFEKQLRILLQTVNSTHQRH-ALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLS 749 NR F +QL + + Q H A++F DLDRFK +NDS GH GD +L A+ + Sbjct: 872 PNRLYFMEQLAAAISQAQTNPQFHYAVLFFDLDRFKVINDSLGHGVGDQVLIAFATWLRR 931 Query: 750 MLRSSDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGI 808 ++ + +AR GGDEF +LL + + A + +I ++ R + S G+ Sbjct: 932 LVGNQYTVARFGGDEFVILLTHVPHPQRAIALCEELIHSLQQ-PLRVGERQIFLSTSIGV 990 Query: 809 TLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKE 868 + V+ AD A YA+K R V++ Q ER + D + + + + Sbjct: 991 VFAQNEYETGMAVLRDADTAMYAAKRQSGRRYAVFDTQMYEQVLERLHLEHDLR-QALNQ 1049 Query: 869 NQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVF 927 L +L V + R + + +L W E ++ F D L ALD+ Sbjct: 1050 GGLQLLYQPVV--HLQSQRLVGMEALVRWQHPERGLVSPAHFIPIAEDTGLIVALDQWAL 1107 Query: 928 HEFFQQAAKAVAS----KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPA 983 + Q + +S+ +S L T + L + PLP L L + Sbjct: 1108 AQACWQLWTWRQQYSTAANLVLSVNVSAKTLQDPTFLQHLDTIRQRYPLPKGQLLLELTE 1167 Query: 984 EAILDHAESV----QKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGN 1039 ++ + + LR I + G + L + +L +D + ++ N Sbjct: 1168 RIGIELGSEMLSLLESLRHRHVEISIDDFGTGYSCLSYLHSLPIQHLKVDRSFVSQLEEN 1227 Query: 1040 LMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 + +I +I +++LG + IA + P + L +G D G + A P + + Sbjct: 1228 ERNLQIIRMILLLSKQLGYRVIAEGIETPKQLQILQELGCDEGQGYLFARPLPPETFAS 1286 Score = 130 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 60/464 (12%), Positives = 138/464 (29%), Gaps = 70/464 (15%) Query: 285 MVMYAFRAERKHIS-------ESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGY 337 + A + + ++ + + + N A CQF Sbjct: 151 WEITARKRSELEQQILKNYWQAQANRYYEILQSQSDLVLCSRADTTITFANDAFCQFFSR 210 Query: 338 SQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLV 397 + G + + EDL L++V + + + T+ E R Y+ + W + + Sbjct: 211 PASVVIGCPWSEFVLAEDLPPLLEKVAQ-LRPDAPTFVNENRVYHPQYGLRWTQWMNTAI 269 Query: 398 RHTDGTPLYFIAQIEDINELKR---TEQVNQQLMERITLANEAG---------------- 438 +G + DI LK EQ +++ I + + Sbjct: 270 FDAEGNLREIQSVGRDITALKEQLLREQALNHVIQAIRNSLDLATIFETAVREIAQVGLG 329 Query: 439 -GIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQS 497 + ++ + ++ P + + +I DS + Sbjct: 330 VDAAVVQYLPEQGVWRHIAEYHHDPHFPCGEGLEIPDRDNPFAADLKAGNIVIIADSREI 389 Query: 498 RSPFK-----------LEFRITVKDGIR---------HIRALANRVLNKEG--------- 528 P L + V D + + ++ Sbjct: 390 TDPVNQAIAPAFPGAWLLIPLIVADRVWGSLTLFNYPEPHEWSRTEIDLARAVATQLEVA 449 Query: 529 --EVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCI----DMAMKITFMNP 582 + ++ E +++ L Q +E +T ++ A+ D ++ ++NP Sbjct: 450 IYQATLYQQAQQELAERRRIEATLRQSEECFRLTATNVPGAIFRYIQYPDGRNRVFYLNP 509 Query: 583 VAEKMSGWTQEEAL--GVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCR-SG 639 + E++ G E A G L ++H + +++ + + + + +G Sbjct: 510 MCERLWGVPAEAAAEDGEHLWQLVHPEDRE--ATWQSVLRSAETLTPWFAQWRIIHPTTG 567 Query: 640 GSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQL-SYSA 682 + + P DG+ + VI DVT+ +L A Sbjct: 568 EIRWLEGAGQPTRDADGAVVWH-TVILDVTDRHLAEARLKEQQA 610 Score = 107 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 42/284 (14%), Positives = 93/284 (32%), Gaps = 25/284 (8%) Query: 299 ESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGY-----SQEELRGLTFQQLTWP 353 + E + + +G+AL G+ + N A LG + ++ + Sbjct: 34 DLEHYLAAVLSVLPVGVALYDVTGEIVYMNPAGRALLGVEDPATTASQICA-DLRIFYCG 92 Query: 354 EDLNKDLQQV--EKLISGEI-NTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQ 410 D ++ + + G +E +Y + + S + + G + I+ Sbjct: 93 SDRPYPKDELPGIQALQGLTVPPMELEVQY---GDRQLTVEVQASPILNPAGQVEFSIST 149 Query: 411 IEDINELKRTEQVNQ-------QLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYE 463 +I KR+E Q R ++ + I + + + Sbjct: 150 FWEITARKRSELEQQILKNYWQAQANRYYEILQSQSDLVLCSRADTTITFANDAFCQFFS 209 Query: 464 IPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD-GIRHIRALANR 522 P + W E VL ED + + F E R+ G+R + + Sbjct: 210 RPASVVIG-CPWSEFVLAEDLPPLLEKVAQLRPDAPTFVNENRVYHPQYGLRWTQWMNTA 268 Query: 523 VLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGE 566 + + EG + + + D+T +K+ ++ L+ + +I Sbjct: 269 IFDAEGNLREIQSVGRDITALKEQ----LLREQALNHVIQAIRN 308 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 42/268 (15%), Positives = 87/268 (32%), Gaps = 16/268 (5%) Query: 427 LMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYE---CVLPED 483 L + +G+ +++ I + L + Q+ + D Sbjct: 35 LEHYLAAVLSVLPVGVALYDVTGEIVYMNPAGRALLGVEDPATTASQICADLRIFYCGSD 94 Query: 484 RQHAEKVI--RDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMT 541 R + + + +LQ + +E + D + A+ +LN G+VE + ++T Sbjct: 95 RPYPKDELPGIQALQGLTVPPMELEVQYGDRQLTVEVQASPILNPAGQVEFSISTFWEIT 154 Query: 542 EVKQLNEALF-------QEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEE 594 K+ + R + L S + V+C ITF N + Sbjct: 155 ARKRSELEQQILKNYWQAQANRYYEILQSQSDLVLCSRADTTITFANDAFCQFFSRPASV 214 Query: 595 ALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTL 654 +G P + D PL+E + + ++ G + T + Sbjct: 215 VIGCPWSEFVLA--EDLPPLLEKVAQLRPDAPTFVNENRVYHPQYGLRWTQWMNTAIFDA 272 Query: 655 DGSNIGSVLVIQDVTESRKMLRQLSYSA 682 +G+ V +D+T + + L A Sbjct: 273 EGNLREIQSVGRDITALK--EQLLREQA 298 >UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YY70_9NEIS Length = 1054 Score = 817 bits (2110), Expect = 0.0, Method: Composition-based stats. Identities = 149/709 (21%), Positives = 276/709 (38%), Gaps = 41/709 (5%) Query: 398 RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKR 457 R G ++ D+ + ++ + + + + Sbjct: 371 RWIKGLIAHY---HRDLEHSLEELGERSRDLQLSRFMTDHASDVVLLLDEDGAPRYLNAA 427 Query: 458 MFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIR 517 L P + P D P L + + D + Sbjct: 428 AAALLGDDPAQ--RGPRLAALLPPSD---------------QPLPLTYETVLDDVPFEVS 470 Query: 518 ALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKI 577 + + + R DM+ +Q + + D+ +A+V D + I Sbjct: 471 LTSMQYQDHAYRSLR----ARDMSRRQQAEQQQRLAAK----IFDTSSQAIVISDASNHI 522 Query: 578 TFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCR 637 +N ++G++ +EA+G + + + ++ R ++ + Sbjct: 523 VMVNRAFTDITGYSAQEAIGRQPSLL--SSGRQPPAFYQKMWQQLAQRGHWAGEIWNRRK 580 Query: 638 SGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFE 697 G Y SI+ L G V + D++E ++ + + A HD LT L NRA Sbjct: 581 DGTIYPEWLSISLLRDEAGQVSHHVALFSDISERKEQEAHIRHMAEHDFLTDLPNRALIH 640 Query: 698 KQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVL 757 +L ++ R A++F+DLD FK +ND+ GHA GD LL+++A + +R SD + Sbjct: 641 DRLAQAIRAAARQKNRLAVLFLDLDHFKNINDTLGHAHGDELLKQVAQRLQHTVRGSDTV 700 Query: 758 ARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNH 816 R GGDEF L++P+ + A +A R++ + F +G+ + S GI+L DN Sbjct: 701 GRNGGDEFVLIVPELASPAEAAQLAQRLLDDLRR-PFQIDGQALAISTSIGISLFPDNGS 759 Query: 817 QAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAH 876 + E++ AD+A Y +K GR R + P+ A +ER + + + ++ QL ++ Sbjct: 760 ELQELLVSADLAMYHAKAQGRNRYQFFTPELNAQVAERLTLENHLR-QALERQQLYLVYQ 818 Query: 877 GVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAA 935 I R + +L W E +I F + L + R V E +QAA Sbjct: 819 PQ--FAIDNRRLVGCEALLRWQHPEQGLISPARFIPLAEETGLIVEIGRWVLDEACRQAA 876 Query: 936 KAVASK-GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES-- 992 +A+ + +++ +S L L+ ++ L LP L L + +++ AE Sbjct: 877 AWLAAGTPLRVAVNVSARQLGQPDLLAEVEAALARHRLPSCWLELEVTESTLMEDAEQAV 936 Query: 993 --VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQ 1050 +Q + G + + G LK D + +D N+ N D +++ I Sbjct: 937 RHLQAFKERGIHLAVDDFGTGYSSLTYLKRFSPDLIKIDRAFVMNLPDNRDDAAIVSAIV 996 Query: 1051 GHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNS 1099 A+ LGM+T+A V +D L+ G D++ G + Q L Sbjct: 997 QLAEALGMQTLAEGVESEEQLDFLAQAGCDVVQGYLTGRPQSAGELTAQ 1045 Score = 136 bits (344), Expect = 5e-30, Method: Composition-based stats. Identities = 40/244 (16%), Positives = 86/244 (35%), Gaps = 11/244 (4%) Query: 307 AMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKL 366 + S+ + + + N+A GYS +E G L+ Q++ + Sbjct: 505 IFDTSSQAIVISDASNHIVMVNRAFTDITGYSAQEAIGRQPSLLSSGRQPPAFYQKMWQQ 564 Query: 367 ISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQ 426 ++ + ++ E ++G + L++SL+R G + +A DI+E K E + Sbjct: 565 LA-QRGHWAGEIWNRRKDGTIYPEWLSISLLRDEAGQVSHHVALFSDISERKEQEAHIRH 623 Query: 427 LMERITLANEAGGIGIWE--WELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDR 484 + E L + I + + R+ L+ + N ++ Sbjct: 624 MAEHDFLTDLPNRALIHDRLAQAIRAAARQKNRLAVLF-LDLDHFKNINDTLGHAHGDEL 682 Query: 485 -----QHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIR--ALANRVLNKEGEVERLLGIN 537 Q + +R S EF + V + LA R+L+ ++ G Sbjct: 683 LKQVAQRLQHTVRGSDTVGRNGGDEFVLIVPELASPAEAAQLAQRLLDDLRRPFQIDGQA 742 Query: 538 MDMT 541 + ++ Sbjct: 743 LAIS 746 >UniRef50_Q31M30 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Synechococcus elongatus RepID=Q31M30_SYNE7 Length = 917 Score = 815 bits (2107), Expect = 0.0, Method: Composition-based stats. Identities = 144/772 (18%), Positives = 287/772 (37%), Gaps = 52/772 (6%) Query: 343 RGLTFQQLTWPEDLNKDLQQVEKLIS----------GEINTYSMEKRYYNRNGDVVWALL 392 G + + P L LQ + + + Y + + W Sbjct: 166 IGRSLHE---PFTLTSFLQHCHSSLESLQANAISLGNQRSHYLWDFPVKTAH-SDRWFEC 221 Query: 393 AVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIF 452 L G L + I DI E + Q R + E+ GI + + + Sbjct: 222 HCLLHHDETGELLSLVGNIRDITEEHHILSLVQDSETRFQVLIESNPNGILVLDEQGAVL 281 Query: 453 SWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG 512 + ++++ K + L +L+ + Sbjct: 282 FANHVAEQVFDQSLSELQG-----------------KYLGLPLTLNVTVQLDL-VQPDGS 323 Query: 513 IRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCID 572 +R++ + + + L + D+T ++Q + L + L ++ +++ Sbjct: 324 LRYVEVSIVPI--PWQQSKAYLALLTDITSLQQTQQRL----KLLQEATENSPASILITS 377 Query: 573 MAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDV 632 I ++NP E M+G+ +E +G + + + ++++ T+ ++ Sbjct: 378 AEGIIEYVNPAFELMTGYGADEVIGKNPRFLK--SGLMSPSFYQDLWETITAGETWRGEL 435 Query: 633 VLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLAN 692 ++G + SI+P+ L G I V V +D+TE ++ L + A++D+LT L N Sbjct: 436 YNRRKTGELFWDRTSISPVKDLAGQIIHFVAVKEDITEQKRNRELLDHQANYDSLTDLPN 495 Query: 693 RASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLR 752 R+ +LR ++ ++ +DLDRFK +ND+ GH+ GD LL+E+A + L Sbjct: 496 RSLALDRLRQATALSERSNDTVIVMLLDLDRFKNINDTLGHSYGDCLLQEIAKRLRYHLP 555 Query: 753 SSDVLARLGGDEFGLLLPDCNVE-SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLI 811 ++RLGGDEF ++ P ++ +++ ++ E + AS G+ Sbjct: 556 REITISRLGGDEFLIICPAVKENIHLEKLSQQLLKIISQ-PITIEAEELVITASIGVACY 614 Query: 812 DDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQL 871 ++ +M AD A Y++K G ++ P A R + + +++ QL Sbjct: 615 PNDGVTPEVLMRNADTAMYSAKRNGGNDFQLFMPTMNAEAHARIQLETHLR-HALEQYQL 673 Query: 872 MMLAHGVASPRIPEARNLWLISLKLWS-CEGEIIDEQTFRRSFSDPALSHALDRRVFHEF 930 + + S + + + L +L W E I F + L L RV + Sbjct: 674 KVFYQPIISLQ--DNHVVGLEALARWHDPELGNIPPDRFIPIAEETGLIIPLGYRVIEQA 731 Query: 931 FQQAAKAVA--SKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILD 988 Q A + +++ LS L S + L+ P L L + + +LD Sbjct: 732 CQDVAIWQQKYNYPFWVAVNLSPRQLRSNRFTQITAKILQRHNFRPNYLKLEVTEQMLLD 791 Query: 989 HAESVQK----LRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEM 1044 + ++ + L G + L G + L+ L +D ++ + Sbjct: 792 NTSTIAQMLDTLHRKGIALALDDFGTGYSALSYLRRYPFQSLKVDQSFLRDIPHSTESCA 851 Query: 1045 LITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 L+ I A LGM+ +A V ++ L IG + G + P + Sbjct: 852 LVKTIVAMAHGLGMQAVAEGVETAEQVEFLKAIGCEYGQGYWFSRPLPAVEI 903 Score = 140 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 41/292 (14%), Positives = 91/292 (31%), Gaps = 15/292 (5%) Query: 225 WSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMT 284 S ++ + L TV + + + + L+ Sbjct: 295 LSELQGKYLGLPLTLNVTVQLDLVQPDGSLRYVEVSIVPIPWQQSKAYLALLT------- 347 Query: 285 MVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRG 344 + + + ++ + + A E S + + EG N A GY +E+ G Sbjct: 348 -DITSLQQTQQRLK----LLQEATENSPASILITSAEGIIEYVNPAFELMTGYGADEVIG 402 Query: 345 LTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTP 404 + L Q + + I+ T+ E + G++ W ++S V+ G Sbjct: 403 KNPRFLKSGLMSPSFYQDLWETITA-GETWRGELYNRRKTGELFWDRTSISPVKDLAGQI 461 Query: 405 LYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI 464 ++F+A EDI E KR ++ +L + + + +R + + Sbjct: 462 IHFVAVKEDITEQKRNRELLDHQANYDSLTDLPNRS--LALDRLRQATALSERSNDTVIV 519 Query: 465 PPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHI 516 ++ + + + I L+ P ++ D I Sbjct: 520 MLLDLDRFKNINDTLGHSYGDCLLQEIAKRLRYHLPREITISRLGGDEFLII 571 Score = 122 bits (308), Expect = 7e-26, Method: Composition-based stats. Identities = 40/281 (14%), Positives = 91/281 (32%), Gaps = 33/281 (11%) Query: 277 LLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLG 336 LL + + +SET F+ +E + G+ ++ +G L N Q Sbjct: 233 LLSLVGNIRDITEEHHILSLVQDSETRFQVLIESNPNGILVLDEQGAVLFANHVAEQVFD 292 Query: 337 YSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSL 396 S EL+G +++ +G + + +++ Sbjct: 293 QSLSELQGKYLGL-------------------PLTLNVTVQLDLVQPDGSLRYVEVSIVP 333 Query: 397 VRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDK 456 + ++A + DI L++T+Q + + A E I + I + Sbjct: 334 IPWQQSKA--YLALLTDITSLQQTQQRLK----LLQEATENSPASILITSAEGIIEYVNP 387 Query: 457 RMFELYEIPPHIKPNWQVWYE---CVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGI 513 + + + P + + +++ + ++ E K G Sbjct: 388 AFELMTGYGADEVIGKNPRFLKSGLMSP----SFYQDLWETITAGETWRGELYNRRKTGE 443 Query: 514 RHI-RALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQE 553 R + V + G++ + + D+TE K+ E L + Sbjct: 444 LFWDRTSISPVKDLAGQIIHFVAVKEDITEQKRNRELLDHQ 484 Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats. Identities = 48/377 (12%), Positives = 118/377 (31%), Gaps = 49/377 (12%) Query: 316 ALVGTEGQWLQTNKALCQFLGYS----------QEELRGLTFQQLTWPEDLNKDLQQVEK 365 L GQ L + + Q S +++ ++L ++Q+ Sbjct: 24 WLFTPAGQLLLASPSAQQLSLLSDPNTLSIPSWLQQVIEKVLASNHLDQNLEPQVEQLRV 83 Query: 366 LISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQ 425 ++ E+ + L + + + + + + + ++ Sbjct: 84 ALATEVVH--------------IPLTLELQWLADVESEASFLLVTGS-CQDSHQNLFLDW 128 Query: 426 QLMERITLANEAGGIGIWEWEL-KPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDR 484 Q ++ + + + +G W W + + F ++ H + + Sbjct: 129 QQLQSLEVQRLSHKVGHWSWNRSQADEFLAPPHIYTQIGRSLHEPFTLTSFLQHCHS-SL 187 Query: 485 QHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVK 544 + + RS + +F + R ++ GE+ L+G D+TE Sbjct: 188 ESLQANAISLGNQRSHYLWDFPVKTAHSDRWFECHCLLHHDETGELLSLVGNIRDITEEH 247 Query: 545 QLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVL 604 + + + R + ++S ++ +D + F N VAE++ + E G L L Sbjct: 248 HILSLVQDSETRFQVLIESNPNGILVLDEQGAVLFANHVAEQVFDQSLSELQGKYLGLPL 307 Query: 605 HITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLV 664 + + + L G V SI P+ + + Sbjct: 308 TLN--------------------VTVQLDLVQPDGSLRYVEVSIVPIPWQQSKA--YLAL 345 Query: 665 IQDVTESRKMLRQLSYS 681 + D+T ++ ++L Sbjct: 346 LTDITSLQQTQQRLKLL 362 >UniRef50_C6E953 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=C6E953_GEOSM Length = 953 Score = 814 bits (2104), Expect = 0.0, Method: Composition-based stats. Identities = 171/865 (19%), Positives = 333/865 (38%), Gaps = 31/865 (3%) Query: 244 MMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETH 303 ++ ++ + D +L P Y ++ +++ + R + +S++E Sbjct: 99 LLSAIEIGMDHYVLK-PVNYPELFHVLDRIAEKIMLKRLVSEQVERIRRREQQLSQAER- 156 Query: 304 FRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGL--TFQQLTWPEDLNKDLQ 361 + +G E + L + LG E + + ++ P D + Sbjct: 157 ------ITHLGSWEWNLESGETVWSDELYRILGLEPESVAATFESLLRMVHPADRETMEK 210 Query: 362 QVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTE 421 V++L R +G+ + VR G I D+ ELK E Sbjct: 211 AVQQLRETGSALGIQYYRLLRADGETRIVRGQLESVRDGSGRQT-VIGACHDVTELKWAE 269 Query: 422 QVNQQLMERITLANEAGGIGIWEWELKPN-IFSWDKRMFELYEIPPHIKPNWQVWYECVL 480 + R + +A + LK I ++ + + Sbjct: 270 AALRASERRFSKIFQATPDLLSITSLKDGTILEVNEAFLRVLGYQRQEVIGTYAGELGLW 329 Query: 481 PEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDM 540 D +++ + +E R+ ++G ++ ++ G LL + D+ Sbjct: 330 -ADSDQPAALLQQLEERGEVRDIEVRLKGRNGRELEGLVSAELIEINGNP-YLLTLFKDI 387 Query: 541 TEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPL 600 +E K+L E + RL ++S +A++ +D IT N AEKM G+ ++ GV L Sbjct: 388 SERKRLEED----RARLAAIVESSDDAIMAVDREGAITSWNAGAEKMFGYCAQDMKGVHL 443 Query: 601 LTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIG 660 ++ + + + + + +VV R G V +++P+ + DG +G Sbjct: 444 SFLVSPEKKEQVTCLNDGIRS--DGAVTHCEVVHVTRGGSQIYVSLTMSPIKSADGGIVG 501 Query: 661 SVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFID 720 + + +DVTE +M + + A HD LT L NR F L + L + A++F+D Sbjct: 502 TSCIARDVTERTRMEEIIKHQAQHDTLTDLPNRKLFGDFLNLELAQARRNRKSLAVLFMD 561 Query: 721 LDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN-VESARF 779 LD FK VNDS GHAAGD LL+ +A + +R SD +AR+ GDEF +L+PD + Sbjct: 562 LDHFKKVNDSLGHAAGDRLLQAVAQRLKRCVRESDTVARISGDEFNVLMPDLTQTDDVGI 621 Query: 780 IATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGR 839 + +I+ F+ EG +V S G+++ D+ A E++ +AD A Y +K Sbjct: 622 VVGKIMGVF-RTPFVLEGAELKVTTSVGVSMFPDDGDSAQELLQKADGAMYVAKQTPGNS 680 Query: 840 VTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-S 898 Y + A R M + +++L ++ + + + +L W Sbjct: 681 YQFYNGEINARTVARQNMER-RLREAVSKDELDLVYQPL--LSLESGEIVGAEALLRWHH 737 Query: 899 CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK-GISISLPLSVAGLSSA 957 E ++ F + + V +Q + +S+++ LS Sbjct: 738 PEHGLLLPAQFLPVAEETGAIVPIGEWVLFNACRQMRLWQSQGFDLSVAVNLSNREFHQP 797 Query: 958 TLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQ 1013 ++ + L S L P L L + +AI+D+ +++L G + G Sbjct: 798 NFIDLAMRALSQSGLDPASLELDVTEKAIMDNPAFSLRNMRRLTDIGVAFSVDDFGVGAS 857 Query: 1014 IFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDT 1073 + +K + +D ++ D +++ + + L M+ A V + Sbjct: 858 SLSRIKELPIAKVKIDRSFIRDILTEPNDLDVVSAVICMSHSLKMRVNAVGVESAEQLAL 917 Query: 1074 LSGIGVDLIYGEVIADAQPLDLLVN 1098 + G D + G++I+ P Sbjct: 918 VGSFGCDEVQGDLISRPLPPHEFER 942 >UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEV3_VEREI Length = 981 Score = 814 bits (2103), Expect = 0.0, Method: Composition-based stats. Identities = 147/691 (21%), Positives = 271/691 (39%), Gaps = 20/691 (2%) Query: 416 ELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVW 475 ++ + Q +++ +A ++E + S + EL P V Sbjct: 293 QVAQRISEIQATQQQLRATIDAIPDPLFEIDQDGRYCSVHSQRAELLMGPAEQLIGRNV- 351 Query: 476 YECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKD-GIRHIRALANRVLNKEGEVERLL 534 E + V+ ++ + + + D G A R G R++ Sbjct: 352 TEVLPTLAALSVLDVLHEAQAQGWSVGRQIMLDLPDLGPTWFELSAARKPQAAGAKPRII 411 Query: 535 GINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEE 594 ++ D+TE K+ E L + D EA+V D + +I +N +++G+ + E Sbjct: 412 LLSRDITERKRSQEQL----QLTAQVFDQSSEAIVIADASHRIVRINRAFSRITGYQESE 467 Query: 595 ALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLST- 653 A+G + + G + + +Y+ + E + + G Y S++ + Sbjct: 468 AVGQSVRLLTMAEAGPDCNA-DAVYARLARQERWEGESWGRRKDGSGYPQWLSVSSVRDG 526 Query: 654 -LDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQ 712 +G S+ + +D++ R+ ++ A D LT L NR ++ + + + Sbjct: 527 DANGPITHSITLFRDISLQREAQERIQRLAHFDPLTDLPNRVLLAERTQRQIAQEQARGG 586 Query: 713 RHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC 772 + AL+F+DLD FK VNDS GH GD LL +A + S++ D ++RLGGDEF LLLP Sbjct: 587 QLALLFLDLDHFKNVNDSLGHRIGDILLVAVARRLQSLIGPQDTVSRLGGDEFLLLLPAT 646 Query: 773 NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYAS 832 + A +A+ +++AV F + S GI + + + +AD A Y++ Sbjct: 647 SAAHAAKVASALLTAVAQ-PFQIDPYELSTTLSVGIAMCPADGESFDTLYQRADAAMYSA 705 Query: 833 KNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLI 892 K GR R + A + + + R ++ Q + S + + + Sbjct: 706 KQSGRNRYGFFTADLQARTARALQIENALR-RALERQQFELHYQPQVS--LGTGQVVGAE 762 Query: 893 SLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVA--SKGISISLPL 949 +L W E ++ F + AL V H + A + + ++S+ L Sbjct: 763 ALLRWHHPELGVVAPAEFIPVAENSGQIVALGEWVLHTAARDAKRWLDMQLPLRAVSVNL 822 Query: 950 SVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRLAGCRIVL 1005 S L + L+ + LP R L L + A +D + +L G R+ + Sbjct: 823 SAVQFRHPQLPEMVTRCLQQAGLPARRLELELTEGAAVDDPVAALAMMDQLHDRGVRLSM 882 Query: 1006 SQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPV 1065 G + LK L +D ++ + D +++ I AQ LGM+T A V Sbjct: 883 DDFGTGYSSLSCLKRFQIYKLKIDQSFVRDLDDDANDRAIVSAIIRMAQALGMQTTAEGV 942 Query: 1066 VLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 + L G D G + + P D Sbjct: 943 ETDGQLQFLRAQGCDEGQGYLFSRPLPADAF 973 Score = 129 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 54/402 (13%), Positives = 108/402 (26%), Gaps = 19/402 (4%) Query: 56 AFYRHAGRMWPGIALSCSLGNIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWY 115 + + P + + L + A + + + A + Sbjct: 177 WGFTYVAIRLPDVLAAARLDQLTARGYRYRLWRVRPDNGQEQTIAASAPPAGAGAMSRSL 236 Query: 116 NPLQNLADWLRLALGSAIVPPLLGGVLVVLLTPGDDPLRAFLIWVLSESIGALALVPLGL 175 +L + L A L+ L+ + AL GL Sbjct: 237 ALPNGQWTLGLTPAQGWGAAGVLALRCALGLL------FALLMAYLARLLFALKAHERGL 290 Query: 176 LFKPHYLLRHRNPRLLFESLLTLAITLTL------SWLSMLYLPWPFTFIIVLLMWSAVR 229 + + AI L ++ + Sbjct: 291 ADQVAQRISEIQATQQQLRATIDAIPDPLFEIDQDGRYCSVHSQRAELLMGPAEQLIGRN 350 Query: 230 LPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMP-WLPFLLILLPANIMT---- 284 + + L L+ + ++ A S+ L P W P Sbjct: 351 VTEVLPTLAALSVLDVLHEAQAQGWSVGRQIMLDLPDLGPTWFELSAARKPQAAGAKPRI 410 Query: 285 MVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRG 344 +++ ERK E + S+ + + + ++ N+A + GY + E G Sbjct: 411 ILLSRDITERKRSQEQLQLTAQVFDQSSEAIVIADASHRIVRINRAFSRITGYQESEAVG 470 Query: 345 LTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTD--G 402 + + LT E + E ++G L+VS VR D G Sbjct: 471 QSVRLLTMAEAGPDCNADAVYARLARQERWEGESWGRRKDGSGYPQWLSVSSVRDGDANG 530 Query: 403 TPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWE 444 + I DI+ + ++ Q+L L + + + E Sbjct: 531 PITHSITLFRDISLQREAQERIQRLAHFDPLTDLPNRVLLAE 572 >UniRef50_Q2BL35 Sensory box/GGDEF/GAF/EAL domain protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BL35_9GAMM Length = 970 Score = 814 bits (2103), Expect = 0.0, Method: Composition-based stats. Identities = 165/852 (19%), Positives = 311/852 (36%), Gaps = 88/852 (10%) Query: 315 MALVGTE-GQWLQTNKALCQFLGYSQEELRGLTFQQL--TWPEDLNKDLQQVEKLISGEI 371 M L+ G+ + N A F GY + LR ++ QQ+ PE + ++ KL + Sbjct: 1 MLLIDPSSGKIIDANPAAATFYGYGRSTLRAMSIQQINTLTPEQVKEE----RKLAKSQG 56 Query: 372 NTYSMEKRYYNRNGDVVWALLAVSLV------------------RHTDGTPLYF------ 407 Y R+ +GD+ + + RH D ++ Sbjct: 57 RNY-FIFRHELASGDIRTVAVQSNPFSFSGKTLLLSVINDITPGRHDDQALWHYQSRLEE 115 Query: 408 -------------------------------IAQIEDINELKRTEQVNQQLMERITLANE 436 + + I+ + + + Sbjct: 116 MVDQQVREIEEVRQQKEWILWGGITLQAIIILGLVFSIHRGLKLRDELSSQRQSLRNIIW 175 Query: 437 AGGIGIWEWELKPNIFSWDKRMFELYEIPPHIK--PNWQVWYECVLPEDRQHAEKVIRDS 494 +G WEW ++ + R + + W+ V P+D + + + + Sbjct: 176 GTDVGTWEWNVRTGEAHLNTRWAATLGYTLDELQPISIETWWMYVHPDDVERSREALHKH 235 Query: 495 LQSRS-PFKLEFRITVKDGIRHIRALANRVL--NKEGEVERLLGINMDMTEVKQLNEALF 551 S ++ E R+ K+G +V+ ++ G+ E + G + ++TE K +L Sbjct: 236 FSGESDAYQCEVRMRHKEGHWVWVLDRGKVVAWSESGKPEWVSGTHTEITEKKAAEGSLL 295 Query: 552 QEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDN 611 Q + E ++ D I N +++G+++ E +G + + Sbjct: 296 Q----AASVFEHANEGIMITDPEGTIQNANLAFSRITGYSRNEVIGQNPRIF--SSGHHD 349 Query: 612 GPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTES 671 ++ + + + ++ + G + +++ + +G + V + D+T Sbjct: 350 DQYFAEMWKSLSEKGNWTNEIWNRRKDGEIFAAIQTVSAIKDENGELLRYVSLFSDITAL 409 Query: 672 RKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSA 731 +K +QL A +DALT L NR +L+ + + A+ F DLD FK VND+ Sbjct: 410 KKQQQQLEKIAHYDALTGLPNRVLLSDRLQQAILQAKRHKRLLAVAFFDLDGFKEVNDTH 469 Query: 732 GHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN-VESARFIATRIISAVND 790 GH+ GD LL ELA LR D LARLGGDEF ++L D + E + + R++ A++ Sbjct: 470 GHSIGDKLLIELAERSKQALREGDSLARLGGDEFVVVLQDLHSSEESLPVLERLLKAISK 529 Query: 791 YHFIWEGRVHRVGASAGITLIDD-NNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAA 849 F+ V AS GIT + A +++ QAD A Y +K G+ R +++ + Sbjct: 530 PIFM-NHTEICVSASIGITFYPQADEIDADQLIRQADQAMYVAKQSGKNRYHIFDTEHDR 588 Query: 850 AHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQT 908 + + + + + + R + + +L W E ++ Sbjct: 589 SVRGHHD-QVLRIHSALNNREFELYYQPKVNMR--TGQVVGAEALIRWNHPENGLVMPGD 645 Query: 909 FRR-SFSDPALSHALDRRVFHEFFQQAAKAVASK-GISISLPLSVAGLSSATLVNDLLEQ 966 F D L + V + Q + + +S+ + L V+ L + Sbjct: 646 FLPVIAGDAGLVVEVGDWVLEQAMTQIDQWHQQGLDVPVSVNVDALHLQLPDFVDRLQQM 705 Query: 967 LENS-PLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKAN 1021 L + P L L + + L+ + + R G L G LK Sbjct: 706 LAAHPGVLPGDLELEVLETSALNDINRVSTIINECRDIGISFALDDFGTGYSSLTYLKQL 765 Query: 1022 MADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDL 1081 A L +D ++ +L D ++ + G A +TIA V + L +G +L Sbjct: 766 PAHLLKIDRSFVCDMLDDLEDLSILEGVLGLANAFRCQTIAEGVESVAQGEMLLMMGCEL 825 Query: 1082 IYGEVIADAQPL 1093 G VIA Sbjct: 826 AQGYVIAKPMQA 837 Score = 161 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 53/291 (18%), Positives = 99/291 (34%), Gaps = 12/291 (4%) Query: 266 SHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWL 325 + W L + + ++ R +S RN + + +G Sbjct: 132 EWILWGGITLQAIIILGLVFSIHRGLKLRDELSSQRQSLRNIIWGTDVGTWEWNVRTGEA 191 Query: 326 QTNKALCQFLGYSQEELRG---LTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYN 382 N LGY+ +EL+ T+ P+D+ + + + K SGE + Y E R + Sbjct: 192 HLNTRWAATLGYTLDELQPISIETWWMYVHPDDVERSREALHKHFSGESDAYQCEVRMRH 251 Query: 383 RNGDVVWALLAVSLVRH-TDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIG 441 + G VW L +V G P + +I E K E Q E G Sbjct: 252 KEGHWVWVLDRGKVVAWSESGKPEWVSGTHTEITEKKAAEGSLLQAA----SVFEHANEG 307 Query: 442 IWEWELKPNIFSWDKRMFELYEIPPHIKPNWQV-WYECVLPEDRQHAEKVIRDSLQSRSP 500 I + + I + + + + + +D + SL + Sbjct: 308 IMITDPEGTIQNANLAFSRITGYSRNEVIGQNPRIFSSGHHDD--QYFAEMWKSLSEKGN 365 Query: 501 FKLEFRITVKDGIRH-IRALANRVLNKEGEVERLLGINMDMTEVKQLNEAL 550 + E KDG + + ++ GE+ R + + D+T +K+ + L Sbjct: 366 WTNEIWNRRKDGEIFAAIQTVSAIKDENGELLRYVSLFSDITALKKQQQQL 416 Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats. Identities = 38/228 (16%), Positives = 87/228 (38%), Gaps = 11/228 (4%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 E+K S + E++ G+ + EG N A + GYS+ E+ G + + Sbjct: 285 TEKKAAEGSLLQAASVFEHANEGIMITDPEGTIQNANLAFSRITGYSRNEVIGQNPRIFS 344 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 ++ ++ K +S E ++ E ++G++ A+ VS ++ +G L +++ Sbjct: 345 SGHHDDQYFAEMWKSLS-EKGNWTNEIWNRRKDGEIFAAIQTVSAIKDENGELLRYVSLF 403 Query: 412 EDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPN 471 DI LK+ +Q +++ L + + KR L + Sbjct: 404 SDITALKKQQQQLEKIAHYDALTGLPNR--VLLSDRLQQAILQAKRHKRLLAVAFFDLDG 461 Query: 472 WQVWYECVLP--------EDRQHAEKVIRDSLQSRSPFKLEFRITVKD 511 ++ + E + +++ +R+ EF + ++D Sbjct: 462 FKEVNDTHGHSIGDKLLIELAERSKQALREGDSLARLGGDEFVVVLQD 509 >UniRef50_C6P3H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3H7_9PROT Length = 912 Score = 813 bits (2102), Expect = 0.0, Method: Composition-based stats. Identities = 127/622 (20%), Positives = 242/622 (38%), Gaps = 23/622 (3%) Query: 492 RDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNK-EGEVERLL-GINMDMT------EV 543 + + F I + ++ ++ ++ +GE LL ++ D++ + Sbjct: 284 NRASEQGWHSIAAFPIPRGGRPFAVLSVYHQHIDAFDGESIALLDEMSRDISFSLDNFDR 343 Query: 544 KQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTV 603 + +A Q + ++ E ++ D I +NP +++G+ E+ +G + Sbjct: 344 EVQRKAAEQSLQLAASIYENSSEGMMITDADNLIMAINPAFTRITGYAMEDVIGKNPGIL 403 Query: 604 LHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVL 663 + + + +++ ++ +SG Y +I + DG + Sbjct: 404 K--SGRHDMDFYQAMWNEILGTGKWIGEIWDRRKSGEVYPKWLTINTVFNDDGKVHHRIA 461 Query: 664 VIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDR 723 + D+++ ++ + A+ D LT L N F +L ++ A+VF+DLD Sbjct: 462 LFTDISQKKESEELIWRQANFDHLTGLPNWRMFHDRLEQEIKKSRRVELPLAVVFLDLDH 521 Query: 724 FKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVES-ARFIAT 782 FK VND+ GHA GD LL+E A + S +R SD +ARLGGDEF LLL + + + + Sbjct: 522 FKEVNDTMGHATGDLLLKEAALRLSSCVRESDTVARLGGDEFALLLGELSDQDSIERVNE 581 Query: 783 RIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTV 842 I++ + F + + S G+T+ + + ++ AD A YA+KN GR R Sbjct: 582 CILNKFSA-PFQLGNELAYISVSIGVTIYPSDATEIEALLRNADQAMYAAKNSGRNRSCY 640 Query: 843 YEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEG 901 Y + R ++S D + + ++Q ++ + + +L W Sbjct: 641 YTQAMQSVAQNRMSLSNDL-HKALAQDQFRLVYQPIV--ELETGSIHKAEALIRWQHPNR 697 Query: 902 EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVA--SKGISISLPLSVAGLS-SAT 958 ++ F L + VF + Q K I IS+ S + Sbjct: 698 GLVSPADFIPIAEQSGLIIQIGDWVFRQAANQVKHWRGAYGKDIQISINKSPVQFKSDSN 757 Query: 959 LVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQI 1014 E L+ L + I ++D +++ + G ++ L G Sbjct: 758 THLAWFEHLKELDLSGGCFAIEITESLLMDASDTIVSKLMAFGNIGMQVALDDFGTGYSS 817 Query: 1015 FNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTL 1074 + LK DY+ +D N+ + D L + A +LG+K IA V D L Sbjct: 818 LSYLKKFDIDYIKIDQSFVRNLAPDSSDLALCEAMIMMAHKLGIKVIAEGVETSEQRDLL 877 Query: 1075 SGIGVDLIYGEVIADAQPLDLL 1096 G D G + + + Sbjct: 878 RTAGCDYGQGYLFSRPLSTEDF 899 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 60/155 (38%), Gaps = 1/155 (0%) Query: 284 TMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELR 343 ++ + +RK +S + E S+ GM + + + N A + GY+ E++ Sbjct: 337 SLDNFDREVQRKAAEQSLQLAASIYENSSEGMMITDADNLIMAINPAFTRITGYAMEDVI 396 Query: 344 GLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGT 403 G L Q + I G + E ++G+V L ++ V + DG Sbjct: 397 GKNPGILKSGRHDMDFYQAMWNEILG-TGKWIGEIWDRRKSGEVYPKWLTINTVFNDDGK 455 Query: 404 PLYFIAQIEDINELKRTEQVNQQLMERITLANEAG 438 + IA DI++ K +E++ + L Sbjct: 456 VHHRIALFTDISQKKESEELIWRQANFDHLTGLPN 490 Score = 71.6 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 23/198 (11%), Positives = 61/198 (30%), Gaps = 8/198 (4%) Query: 364 EKLISGEINTYSMEKRYYNRNGDVVWAL-LAVSLVRHTDGTPLYFIA-QIEDIN------ 415 + + E +S+ R G L + + DG + + DI+ Sbjct: 282 WQNRASEQGWHSIAAFPIPRGGRPFAVLSVYHQHIDAFDGESIALLDEMSRDISFSLDNF 341 Query: 416 ELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVW 475 + + + +Q ++ E G+ + I + + + Sbjct: 342 DREVQRKAAEQSLQLAASIYENSSEGMMITDADNLIMAINPAFTRITGYAMEDVIGKNPG 401 Query: 476 YECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLG 535 D + + + L + + + N V N +G+V + Sbjct: 402 ILKSGRHDMDFYQAMWNEILGTGKWIGEIWDRRKSGEVYPKWLTINTVFNDDGKVHHRIA 461 Query: 536 INMDMTEVKQLNEALFQE 553 + D+++ K+ E ++++ Sbjct: 462 LFTDISQKKESEELIWRQ 479 >UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221U3_RHOFD Length = 1037 Score = 813 bits (2101), Expect = 0.0, Method: Composition-based stats. Identities = 160/923 (17%), Positives = 301/923 (32%), Gaps = 86/923 (9%) Query: 241 TTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKH--IS 298 T+ + ADP L+ L + A + + + Sbjct: 125 WTLSVAPTTGWADPQGLSLKVALAALFSVLLAYSAKQAGAARVRANELQVDVNAQAVELV 184 Query: 299 ESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNK 358 ++ ++ + +G++L + + EL G T ++ + Sbjct: 185 ALNQRLQSTLDALPDLLFETDMDGRYLAYHS--------PRSELLGKTLHRVLPVAVADI 236 Query: 359 DLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELK 418 L V + + + + + +G W L+ S G FI DI E K Sbjct: 237 CLAAVHEANAVGYSHGK-QIQLALPDGA-HWFELSASRKPGLPGDAPTFIVLSRDITERK 294 Query: 419 RTEQVNQQLMERITLANEAGGIGI-------------------------WEWELKPNIFS 453 + E ++L + ++ + W L Sbjct: 295 KAEIKIERLTKLYAALSQCNQAIVRCSDASELFPIICRDAVNFGGMKMAWIGMLDEADQL 354 Query: 454 WDKRMFELYEIPPHIKP---------------------NWQVWYECVLPEDRQHAEKVIR 492 + + W + +D A Sbjct: 355 IKPAASFGSGVEYLEGIEISVDLSGDKGRGPTGTSIREDRPFWCQDFQHDDATAAWHERG 414 Query: 493 DSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMT----------E 542 + + L + + E LL + +D++ E Sbjct: 415 ERFGWGASASLPLHLKDRVIGAFTLYAGEACAFDEAAQNLLLEMALDISFALDRFADERE 474 Query: 543 VKQLNEALFQEKERLHITLDSIGEAVVCIDM-AMKITFMNPVAEKMSGWTQEEALGVPLL 601 K + + L +ER + +AV + +N E+++GW +E +G Sbjct: 475 RKIMQDDLRDSEERYRKAFQTSPDAVNITRLVDGLYVDVNTGFERITGWRHDEVVGKTAT 534 Query: 602 TVLHITFGDNGPLMENIYSADTSRSAIEQ-DVVLHCRSGGSYDVHYSITPLSTLDGSNIG 660 + + + A S + ++G + S + D Sbjct: 535 ELNLWGNPADR---MRLVDALQSEGRCNNLEATFVKKNGDIFHGLMSAEKVRFKD--VDC 589 Query: 661 SVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFID 720 + + +D+TE + Q+ A D LT L NR+ + R L + A++F+D Sbjct: 590 ILSITRDITEKKLAEAQIQQLAHFDQLTGLPNRSQLHDRFRYALSLAQRHGDQLAIMFLD 649 Query: 721 LDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFI 780 LD FK +ND+ GH+ GD LL +++ + + LR D L+RLGGDEF LLLP + A + Sbjct: 650 LDHFKNINDTLGHSVGDQLLVDVSRRLKAALREEDSLSRLGGDEFILLLPGTDEAQASQV 709 Query: 781 ATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRV 840 AT++++AV E S GI L ++ + AD A Y K R Sbjct: 710 ATKLLAAVAQ-PCQIEQNELVSTVSIGIALYPNDGQDFETLSKNADAAMYRVKQASRNDF 768 Query: 841 TVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SC 899 + + + + ++ + ++ + + + + + +L W Sbjct: 769 RFFTQEMQTHSARTLQL-VNALRHALPRHEFELHFQPQVALQ--DGHIVGAEALLRWRHP 825 Query: 900 EGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA--VASKGISISLPLSVAGLSSA 957 E +I F D A+ V +Q + + + I++ LS Sbjct: 826 ELGMISPAEFIPIAEDSGQILAIGEWVLRTAVRQLKQWLDAGLRPMVIAVNLSAVQFRHP 885 Query: 958 TLVNDLLEQLENSPLPPRLLHLIIPA----EAILDHAESVQKLRLAGCRIVLSQVGRDLQ 1013 L+ + L+ + LPP L L + + + KL G R+ + G Sbjct: 886 NLMALVTRILDEAALPPEFLELELTEAAAMDDPPAAIAIMNKLDEHGIRMSIDDFGTGYS 945 Query: 1014 IFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDT 1073 + LK + L +D ++ + D+ ++T I A LGM TIA V + Sbjct: 946 SLSYLKKFKVNKLKIDQSFVRDISDDPDDKAIVTAIINLASSLGMHTIAEGVETASQLAF 1005 Query: 1074 LSGIGVDLIYGEVIADAQPLDLL 1096 L G D + G ++ P D Sbjct: 1006 LRLQGCDEVQGYYVSKPLPKDQF 1028 Score = 109 bits (274), Expect = 6e-22, Method: Composition-based stats. Identities = 39/246 (15%), Positives = 82/246 (33%), Gaps = 6/246 (2%) Query: 235 AFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAER 294 L + ++ A + L L + A + + Sbjct: 420 GASASLPLHLKDRVIGAFTLYAGEACAFDEAAQNLLLEMALDISFALDRFADERERKIMQ 479 Query: 295 KHISESETHFRNAMEYSAIGMALVGT-EGQWLQTNKALCQFLGYSQEELRGLTFQQLTWP 353 + +SE +R A + S + + +G ++ N + G+ +E+ G T +L Sbjct: 480 DDLRDSEERYRKAFQTSPDAVNITRLVDGLYVDVNTGFERITGWRHDEVVGKTATELNLW 539 Query: 354 EDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIED 413 + D ++ + E ++E + +NGD+ L++ VR D ++ D Sbjct: 540 GN-PADRMRLVDALQSEGRCNNLEATFVKKNGDIFHGLMSAEKVRFKD--VDCILSITRD 596 Query: 414 INELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQ 473 I E K E QQL L + + S +R + I +++ Sbjct: 597 ITEKKLAEAQIQQLAHFDQLTGLPNRSQLH--DRFRYALSLAQRHGDQLAIMFLDLDHFK 654 Query: 474 VWYECV 479 + + Sbjct: 655 NINDTL 660 >UniRef50_C5S8G6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S8G6_CHRVI Length = 861 Score = 812 bits (2099), Expect = 0.0, Method: Composition-based stats. Identities = 149/690 (21%), Positives = 258/690 (37%), Gaps = 35/690 (5%) Query: 432 TLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDR------- 484 E + + + + W++ L +P Q + PE R Sbjct: 36 AELLEQLVVPTFVLDATGRVIVWNRACENLTGMPASRVLGSQDHWRAFYPECRPCLADLV 95 Query: 485 --------QHAEKVIRDSLQSRSPFKLEFRITVK--DGIRHIRALANRVLNKEGEVERLL 534 H L++ E + R++ A V + G + ++ Sbjct: 96 LHNRLDEIDHFYTEYDQLLRTGCEIHAENWCVMPLQGTERYLAIDAGPVRDSSGRIIAVV 155 Query: 535 GINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEE 594 D T K L ++ + E ++ D A +I +N +++G+++EE Sbjct: 156 ETLRDRTSHKLAELRL----RQMASVFEHSQEGIMITDPATRILDVNASFVRVTGYSREE 211 Query: 595 ALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTL 654 ALG + + + ++ ++ +SG Y I + Sbjct: 212 ALGRTPTLLK--SGLQDAAFYRALWRDLNETGRWHGEIWNRKKSGELYPEILHINAVQDP 269 Query: 655 DGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRH 714 G + + D+T+ + +L A +D LT L NR +LR L + Sbjct: 270 SGRVTHYIGMFIDITDLKNSQSRLENLAHYDVLTGLPNRLLLGYRLRQALDDAQRHERLA 329 Query: 715 ALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-N 773 A+ F+DLD FK VND GH GD LL ++ + LRS+D +ARLGGDEF +LL D N Sbjct: 330 AVCFLDLDNFKLVNDHHGHETGDRLLIDIGRRLRDTLRSNDTVARLGGDEFVILLNDLRN 389 Query: 774 VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASK 833 E + R++ V + + + S G+T+ ++H ++ AD A Y +K Sbjct: 390 QEELDNVLVRLLDGVA-HPVRIDALQIVITVSVGVTIYPLDDHDPDTLLRHADQAMYQAK 448 Query: 834 NGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLIS 893 GR R +++P+ A A R L+ + ++ + + R+ + + + + Sbjct: 449 QMGRNRYQLFDPEAANAMQSRHR-ELERIRQALQHGEFQLYYQPKVDMRL--GQVVGMEA 505 Query: 894 LKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA-VASKGISISLPLSV 951 L W E ++ F L + V HE Q + + ++IS+ ++ Sbjct: 506 LIRWRHPERGLVPPLQFLPLIEASPLIVEVGEWVLHEALGQIRQWCAEGRPLTISVNIAA 565 Query: 952 AGLSSATLVNDLLEQLENSP-LPPRLLHLIIPAEAILDHAES----VQKLRLAGCRIVLS 1006 V L L P PRLL L I A L+ +S + + G R L Sbjct: 566 HHFQQRDFVLRLQTILAEHPEATPRLLELEILESAALEDIQSVRGIMTACQAMGVRFALD 625 Query: 1007 QVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVV 1066 G + LK A+ L +D N+ + D +I + G A+ + IA V Sbjct: 626 DFGTGYSSLSYLKQLPAETLKIDQSFVRNMLEDSEDLAIIEGVIGLAKVFRKEVIAEGVE 685 Query: 1067 LPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 P L G D G I P + + Sbjct: 686 TPEQGLLLMRFGCDHAQGYGIGRPMPAEQI 715 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 45/274 (16%), Positives = 96/274 (35%), Gaps = 14/274 (5%) Query: 279 PANIMTMVMYAFRAERKHISE-SETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGY 337 I+ +V ++E + E+S G+ + + L N + + GY Sbjct: 148 SGRIIAVVETLRDRTSHKLAELRLRQMASVFEHSQEGIMITDPATRILDVNASFVRVTGY 207 Query: 338 SQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLV 397 S+EE G T L + + + + E + E ++G++ +L ++ V Sbjct: 208 SREEALGRTPTLLKSGLQDAAFYRALWRDL-NETGRWHGEIWNRKKSGELYPEILHINAV 266 Query: 398 RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKR 457 + G ++I DI +LK ++ + L L + +R Sbjct: 267 QDPSGRVTHYIGMFIDITDLKNSQSRLENLAHYDVLTGLPNR--LLLGYRLRQALDDAQR 324 Query: 458 MFELYEIPPHIKPNWQVWYECVLPEDRQHAE----KVIRDSLQSRSPF----KLEFRITV 509 L + N+++ + E + +RD+L+S EF I + Sbjct: 325 HERLAAVCFLDLDNFKLVNDHHGHETGDRLLIDIGRRLRDTLRSNDTVARLGGDEFVILL 384 Query: 510 KD--GIRHIRALANRVLNKEGEVERLLGINMDMT 541 D + + R+L+ R+ + + +T Sbjct: 385 NDLRNQEELDNVLVRLLDGVAHPVRIDALQIVIT 418 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 34/261 (13%), Positives = 78/261 (29%), Gaps = 22/261 (8%) Query: 307 AMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGL--TFQQLTWP----------- 353 +E + ++ G+ + N+A G + G ++ Sbjct: 38 LLEQLVVPTFVLDATGRVIVWNRACENLTGMPASRVLGSQDHWRAFYPECRPCLADLVLH 97 Query: 354 ---EDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQ 410 ++++ + ++L+ ++ G + + VR + G + + Sbjct: 98 NRLDEIDHFYTEYDQLLRTGCEIHAENWCVMPLQGTERYLAIDAGPVRDSSGRIIAVVET 157 Query: 411 IEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKP 470 + D K E +Q+ E GI + I + + Sbjct: 158 LRDRTSHKLAELRLRQMA----SVFEHSQEGIMITDPATRILDVNASFVRVTGYSREEAL 213 Query: 471 NWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRA-LANRVLNKEGE 529 +D + RD ++ + E K G + N V + G Sbjct: 214 GRTPTLLKSGLQDAAFYRALWRDLNETGR-WHGEIWNRKKSGELYPEILHINAVQDPSGR 272 Query: 530 VERLLGINMDMTEVKQLNEAL 550 V +G+ +D+T++K L Sbjct: 273 VTHYIGMFIDITDLKNSQSRL 293 Score = 67.8 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 20/141 (14%), Positives = 36/141 (25%), Gaps = 15/141 (10%) Query: 557 LHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLT-------------- 602 L+ + +D ++ N E ++G LG Sbjct: 35 AAELLEQLVVPTFVLDATGRVIVWNRACENLTGMPASRVLGSQDHWRAFYPECRPCLADL 94 Query: 603 VLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCR-SGGSYDVHYSITPLSTLDGSNIGS 661 VLH + + I + G + P+ G I Sbjct: 95 VLHNRLDEIDHFYTEYDQLLRTGCEIHAENWCVMPLQGTERYLAIDAGPVRDSSGRIIAV 154 Query: 662 VLVIQDVTESRKMLRQLSYSA 682 V ++D T + +L A Sbjct: 155 VETLRDRTSHKLAELRLRQMA 175 >UniRef50_C7R9A3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R9A3_KANKD Length = 1515 Score = 812 bits (2099), Expect = 0.0, Method: Composition-based stats. Identities = 151/711 (21%), Positives = 285/711 (40%), Gaps = 27/711 (3%) Query: 410 QIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIK 469 + E + Q ER+ L+ G +W+W+++ + I+ Sbjct: 808 IWARMRERRMAALQLTQSEERLKLSLWGSGDELWDWQVQSGALHLSNEWPYDFPRD-GIR 866 Query: 470 PNWQVWYECVLPEDRQHAEKVIRDSLQSRS-PFKLEFRITVK-DGIRHIRALANRV-LNK 526 + + + P D + + + L +S ++ +RI+ + G + V ++ Sbjct: 867 SGYSMANSNIHPNDLPYVRQSLNAHLADKSMHYESTYRISDEHGGWIWVLDRGKVVSRDE 926 Query: 527 EGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEK 586 + R+ G ++TE+K + L + + D+I + V +D +N K Sbjct: 927 NQKPLRMAGTLKNITELKNTEQQLSMIVK----SFDNISDGVWILDENFHYIAVNKAFTK 982 Query: 587 MSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHY 646 ++G+ + E LG L+ V + + + + + T + ++V + G +Y + Sbjct: 983 ITGFDESEVLGK-LMKVSSLHQITDDEFYD-LRNELTEKGFWYGELVAKRKDGDTYPIEI 1040 Query: 647 SITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQT 706 +I + DG I V V D+T ++ R+L A+ D LT L NR SF L++ Sbjct: 1041 NIDVVRDNDGEIINYVGVFSDITFRKQAERELRRLATVDQLTDLKNRTSFRTLFEHLIED 1100 Query: 707 VNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSS-DVLARLGGDEF 765 +HAL+FIDLD FK +NDS GH GD LL +A ++ ++ V+ARLGGDEF Sbjct: 1101 SGR-GDQHALLFIDLDNFKRINDSLGHGIGDELLIYVAKILQEIVSDQNGVVARLGGDEF 1159 Query: 766 GLLLPDCNV-ESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQ 824 +LL + + IA I+ V S GI + +N A E++ Sbjct: 1160 TVLLQEVDTWNKPAKIAQAILDEFAKS-LPLSTAEVVVSPSIGIVMYPENGTSAEELLKN 1218 Query: 825 ADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIP 884 AD A Y +K G+ Y Q R + + + + I++++ +M S + Sbjct: 1219 ADTAMYYAKKKGKNTYQFYTRQMNEQAKLRITLESELR-QAIEKDEFVMFYQPKVSLQ-- 1275 Query: 885 EARNLWLISLKLWS-CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK-- 941 + + +L W ++ F + + +RV + Q Sbjct: 1276 TGKITGMEALVRWRNPRRGLVLPGEFIPLAEEAGFIIPISQRVIEKTCLQIRDWQNRGIF 1335 Query: 942 GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLR 997 +++ LS L + L + + P L I +++ + ++ LR Sbjct: 1336 HGKVAVNLSAVQFYHENLWETVKNALHLAKIEPDALEFEITEGMVMEDLAQSLQQMRTLR 1395 Query: 998 LAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLG 1057 G + L G +LK D L +D +++ + D L+ I A L Sbjct: 1396 EMGISLALDDFGVGYSSLGNLKDFPIDTLKIDRTFVWDLEDSDRDRNLVASIVTLAHNLD 1455 Query: 1058 MKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQP---LDLLVNSSYFAIN 1105 +K +A V +D L +G + I G + + P ++ ++N F ++ Sbjct: 1456 IKVVAEGVENRNQVDALREMGCEEIQGFIFSRPVPPWDIETMLNIEDFDLD 1506 Score = 139 bits (352), Expect = 5e-31, Method: Composition-based stats. Identities = 46/318 (14%), Positives = 105/318 (33%), Gaps = 20/318 (6%) Query: 263 YLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEG 322 + ++ L+IL + ++ M R +++SE + ++ S + + Sbjct: 788 SAFTLYGFILGLIILAFSYLIWARMRERRMAALQLTQSEERLKLSLWGSGDELWDWQVQS 847 Query: 323 QWLQTNKALCQFLGYSQEELR-GLTFQ-QLTWPEDLNKDLQQVEKLISGEINTYSMEKRY 380 L + + ++ +R G + P DL Q + ++ + Y R Sbjct: 848 GALHLSNEWP--YDFPRDGIRSGYSMANSNIHPNDLPYVRQSLNAHLADKSMHYESTYRI 905 Query: 381 YNRNGDVVWALLAVSLV-RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGG 439 + +G +W L +V R + PL +++I ELK TEQ I + + Sbjct: 906 SDEHGGWIWVLDRGKVVSRDENQKPLRMAGTLKNITELKNTEQQL----SMIVKSFDNIS 961 Query: 440 IGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRS 499 G+W + + + +K ++ + + + + + Sbjct: 962 DGVWILDENFHYIAVNKAFTKITGFDESEVLGKLMKVSSLHQITDDEFYDLRNELTEKGF 1021 Query: 500 PFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQ------- 552 + I + V + +GE+ +G+ D+T KQ L + Sbjct: 1022 WYGELVAKRKDGDTYPIEINIDVVRDNDGEIINYVGVFSDITFRKQAERELRRLATVDQL 1081 Query: 553 ----EKERLHITLDSIGE 566 + + + E Sbjct: 1082 TDLKNRTSFRTLFEHLIE 1099 >UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacillus sp. WCH70 RepID=C5D2J8_GEOSW Length = 568 Score = 812 bits (2098), Expect = 0.0, Method: Composition-based stats. Identities = 113/547 (20%), Positives = 228/547 (41%), Gaps = 13/547 (2%) Query: 557 LHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLME 616 + E+++ D +I F+NP E ++G++ EE +G + + + + Sbjct: 18 AKNIFEYSNESIIITDAQNRILFVNPAFEIVTGYSAEEVIGKNPRILQ--SGMHDKQFYK 75 Query: 617 NIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLR 676 +++ + ++ + G Y +I+ + G+ V + D+TE ++ + Sbjct: 76 KMWNDIKQHGVWKGEIWNKRKDGELYLEWLTISVVKDQKGNMTNYVAMFSDITEHKRNVE 135 Query: 677 QLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAG 736 QL+ A +D LT++ NR EK+L +++ +Q AL+F+DLDRFK +ND+ GH G Sbjct: 136 QLTRLALYDTLTNVPNRYLLEKRLESIIRMSKKHNQSFALLFLDLDRFKNINDTLGHRVG 195 Query: 737 DALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIW 795 D LL+E A + MLR D +AR GGDEF ++LP+ ++ A ++A +I+ ++ F + Sbjct: 196 DMLLKETAQRLKRMLRKQDTIARFGGDEFVIILPNLKHIREAAYMAEKIVESLKR-PFCF 254 Query: 796 EGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERA 855 + + S GI++ + ++ AD A Y +K GR + +Y + Sbjct: 255 NHQEIYISTSIGISVYPYDGTDKETLIRMADRAMYQAKKNGRNQYALYHAGMHGNGKQLF 314 Query: 856 AMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFS 914 + + + ++ + + + + + +L W E I F Sbjct: 315 QLETALR-KALERGEFELYYQPQLDIK--TKQIRAVEALIRWNHPEKGFISPGMFIPLAE 371 Query: 915 DPALSHALDRRVFHEFFQQAAKAV-ASKGISISLPLSVAGLSSATLVNDLLEQLENSPLP 973 + L + + + + + + +S+ +S + L + +E+ + Sbjct: 372 ESGLITPISDWIMMQACEHLKQLQLRFPYVKMSINISPIYFQQIDFLKKLQKTIESVNVN 431 Query: 974 PRLLHLIIPAEAIL----DHAESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLD 1029 PRL+ L + A++ E + KL+ G I + G + L D L +D Sbjct: 432 PRLIELELTESAVMPHAEQSVERLTKLKTMGMSIAIDDFGTGFSSLSYLHRFPIDILKID 491 Query: 1030 GELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIAD 1089 + D ++ I A L ++ +A V L D + G ++ Sbjct: 492 RSFTKQLSRYQQDSAIVKAIIMMAHSLQIRVVAEGVETKKQYQILEKQSCDFVQGYYVSK 551 Query: 1090 AQPLDLL 1096 + L Sbjct: 552 PLSISEL 558 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 37/230 (16%), Positives = 77/230 (33%), Gaps = 3/230 (1%) Query: 305 RNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVE 364 +N EYS + + + + L N A GYS EE+ G + L + +++ Sbjct: 19 KNIFEYSNESIIITDAQNRILFVNPAFEIVTGYSAEEVIGKNPRILQSGMHDKQFYKKMW 78 Query: 365 KLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVN 424 I + + E ++G++ L +S+V+ G ++A DI E KR + Sbjct: 79 NDIK-QHGVWKGEIWNKRKDGELYLEWLTISVVKDQKGNMTNYVAMFSDITEHKRNVEQL 137 Query: 425 QQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDR 484 +L TL + +I K+ + + + ++ + + Sbjct: 138 TRLALYDTLT--NVPNRYLLEKRLESIIRMSKKHNQSFALLFLDLDRFKNINDTLGHRVG 195 Query: 485 QHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLL 534 K L+ + D I + E+++ Sbjct: 196 DMLLKETAQRLKRMLRKQDTIARFGGDEFVIILPNLKHIREAAYMAEKIV 245 Score = 66.6 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 41/122 (33%), Gaps = 2/122 (1%) Query: 432 TLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVI 491 E I + + I + + D+Q +K+ Sbjct: 19 KNIFEYSNESIIITDAQNRILFVNPAFEIVTGYSAEEVIGKNPRILQSGMHDKQFYKKMW 78 Query: 492 RDSLQSRSPFKLEFRITVKDGIRHIRA-LANRVLNKEGEVERLLGINMDMTEVKQLNEAL 550 D Q +K E KDG ++ + V +++G + + + D+TE K+ E L Sbjct: 79 NDIKQHG-VWKGEIWNKRKDGELYLEWLTISVVKDQKGNMTNYVAMFSDITEHKRNVEQL 137 Query: 551 FQ 552 + Sbjct: 138 TR 139 >UniRef50_C5V0J9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0J9_9PROT Length = 1321 Score = 812 bits (2098), Expect = 0.0, Method: Composition-based stats. Identities = 153/874 (17%), Positives = 319/874 (36%), Gaps = 44/874 (5%) Query: 247 SLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRN 306 L ++ S + W + + + ++ + +SE ++R Sbjct: 465 RLTISPRESFATWVEIFRDKSPQWTQMEIDAANSLALALI---EVLTHHALEQSEENYRF 521 Query: 307 AMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKL 366 + S+ +A +G ++ + + G+S + + G PED + L Sbjct: 522 LTDNSSDMIARFDLDGVYIFLSPSCQSLFGFSAQHMTGCAVTDFIMPEDCVTFQNAL-LL 580 Query: 367 ISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQ 426 + ++ R + VW + + + + +A D+ + + + Sbjct: 581 MGSTDQAQTLLFRSQHDRSKTVWIEYTLKRIINPRSGAIEIVANGRDVTQRHTYQLAIED 640 Query: 427 LMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQH 486 L R EA G G+ I ++R+ ++ + D Sbjct: 641 LHRRNAKILEAAGDGLVSISPDGKIVYTNERVRQILGWGGSELAGKSC-CQLFHARDADT 699 Query: 487 AEKV------IRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDM 540 + I +L + K+G + + G++ + + + Sbjct: 700 SHDYPCDCPLIAQNLNKEVGVSATGYFSHKEGRAIRVDYSCTQMTDHGKLSGAVLVFRES 759 Query: 541 TEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPL 600 TE F +K+ + ++ EAV+ D +IT +N K++G+ EE +G Sbjct: 760 TE----QSMTFDQKQTSDVIFNAASEAVMVTDANRRITSVNRAFIKITGYAAEEMIGQTP 815 Query: 601 LTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIG 660 + + + +Y++ + ++ ++G Y SIT + G Sbjct: 816 KLL--SSGVHTQNFYDAMYASLEASGYWAGEIWNRRKNGEIYPQWGSITAIFGELGDLRS 873 Query: 661 SVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNST-HQRHALVFI 719 + V DV+++++ L + A+HD+LT LANR+ F L L + A+ FI Sbjct: 874 YIAVFSDVSKAKQAEEHLYHLANHDSLTGLANRSKFVDYLNHTLDLARRNRGHKVAVAFI 933 Query: 720 DLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN-VESAR 778 D+DRFK +ND+ GH GD L+ +A+ + S R+ D+L+R GGDEF L++ + +S Sbjct: 934 DMDRFKIINDTLGHTIGDQFLKAIATRISSQCRNEDLLSRWGGDEFVLVMDRVDGPDSVA 993 Query: 779 FIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRG 838 R++ V + +G S GI+ D+ +++ AD A Y K GR Sbjct: 994 EAVRRMMEVVRK-PLLIDGHELEPTLSVGISFFPDDAQNTTDLVKAADTAMYRVKENGRN 1052 Query: 839 RVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW- 897 + QA ++ + + R ++ N+ ++ + + L +L W Sbjct: 1053 GYAFFTELQADESKKKFEIVSEL-NRALRLNEFVLNYQPQV--KPDTGEIVGLEALIRWE 1109 Query: 898 SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK--GISISLPLSVAGLS 955 E + F + + + + V QQ + +++ ++ + L Sbjct: 1110 HPERGYLSPANFIPLAEELGMINQVGEWVIKAVCQQMSAWKLGGVTYPRVAVNVAPSQL- 1168 Query: 956 SATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE---SVQKLRLAGCRIVLSQVGRDL 1012 + L + + L L L + + A+ E +++LR G + + G Sbjct: 1169 DSGLADYVQRTLALYGLTADCLEIELTEGALERGGEVAPVLKQLRELGITLSIDDFGTGY 1228 Query: 1013 QIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLG-------MKTIAGPV 1065 LK + +D + ++ D ++ I + L ++T+A Sbjct: 1229 SSLGHLKNFPINCFKIDKSFVDGLPDSVQDAAIVKTILTLGENLNVEVVVEGVETLA--- 1285 Query: 1066 VLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNS 1099 D L+ IG +I G ++ + Sbjct: 1286 ----QRDFLTSIGAKIIQGYCYGKPLSVEKITER 1315 >UniRef50_C6P6X8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6X8_9PROT Length = 713 Score = 811 bits (2095), Expect = 0.0, Method: Composition-based stats. Identities = 150/723 (20%), Positives = 272/723 (37%), Gaps = 57/723 (7%) Query: 421 EQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKR--MFELYEIPPHIKPNWQVWYEC 478 ER+ LA EA G+ +WE L S EL I ++ Sbjct: 1 MSEQDINQERLELALEAAGLDLWENNLITGEVSRSAAKTFMELGYSNEEITDCLDNYFTL 60 Query: 479 VLPEDRQHAEKVIRDSLQ-SRSPFKLEFRITVKDGIRHIRALANRVLNKEG--EVERLLG 535 + +D + I D L S+ ++ EFRI K+G A +++++ G +R +G Sbjct: 61 IHSDDVPVVQSAINDHLSGSKEQYRCEFRIRAKNGSWVWFANYGKIMDRHGDDRGQRFVG 120 Query: 536 INMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEA 595 + ++ E K+ E L ++ +++ + V D + ++NP E+ Sbjct: 121 VTFNIDERKRKEEQLIVLEQDTRTLIENSPDTVARYDHECRRIYVNPALASSFPGGAEKI 180 Query: 596 LGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLD 655 LG + + I + + ++ + G H +T Sbjct: 181 LGKKPSEI--PGGPEFDKFEAKIVEVFATGNNALFELKWQGKDGKELCNHIRLTAERDSS 238 Query: 656 GSNIGSVLVIQDVTES-------RKMLRQLSY-------SASHDALTHLANRASFEKQLR 701 G + + +D+TE ++ QL A+ D LT L NR +L+ Sbjct: 239 GRLTSVLAIGRDITELYESRAALKRANAQLENMNDLLQSQATSDPLTGLPNRRFMLDRLK 298 Query: 702 ILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLG 761 L + + + + AL+FIDLD FK +ND+ GH GD LL+++A + + +R D +ARLG Sbjct: 299 HALASSSRSGREGALLFIDLDNFKTLNDTLGHDVGDQLLQQVAHRLETCVREGDTVARLG 358 Query: 762 GDEFGLLLPDCNVESARFIA------TRIISAVNDYHFIWEGRVHRVGASAGITLIDDNN 815 GDEF ++L D + + A +I++A+N + +R S G TL +D+ Sbjct: 359 GDEFVVMLEDLSEKDLEAAAQTEAVGEKILAALNQ-PYQLGKHEYRNTPSIGATLFNDHQ 417 Query: 816 HQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLA 875 E++ QADIA Y +K GR + ++PQ + RA + + + + ++ +Q + Sbjct: 418 QSLDELLKQADIAMYQAKRAGRNALRFFDPQMQETINSRATLENELR-KALELHQFYLFY 476 Query: 876 HGVASPRIPEA--RNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQ 932 + R +L W E ++ F + L + V Sbjct: 477 QVQVDSVQEDGSHRATGAEALIRWAHPERGLVSPAQFIPLAEETGLIVPIGLWVLDTACA 536 Query: 933 QAAKAVAS---KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPR-------------L 976 Q +G+ +++ +S V + ++ + P+ Sbjct: 537 QLKTWQHDALTRGLVLAVNVSAKQFRQPDFVAQVDAAVQRHGIDPKLLKLELTESLLLEN 596 Query: 977 LHLIIPAEAILDHAESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANV 1036 + D ++ LR G R L G LK D L +D ++ Sbjct: 597 IQ---------DTIATMNALREIGIRFSLDDFGTGYSSLQYLKQLPLDQLKIDQSFICDL 647 Query: 1037 QGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 + D ++ I AQ L + IA V L G G + + P++ Sbjct: 648 VSDSSDRAIVRTIIAMAQSLNLNVIAEGVETEAQRQILLEKGCIHHQGYLFSKPVPINQF 707 Query: 1097 VNS 1099 Sbjct: 708 EAQ 710 Score = 126 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 47/274 (17%), Positives = 95/274 (34%), Gaps = 16/274 (5%) Query: 301 ETHFRNAMEYSAIGMALVGTEGQWL-QTNKALCQFL---GYSQEELRGL--TFQQLTWPE 354 + A+E + + + + +++ + GYS EE+ + L + Sbjct: 8 QERLELALEAAGLDLW---ENNLITGEVSRSAAKTFMELGYSNEEITDCLDNYFTLIHSD 64 Query: 355 DLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLV-RHTDGTPLYFIAQIED 413 D+ + +SG Y E R +NG VW ++ RH D F+ + Sbjct: 65 DVPVVQSAINDHLSGSKEQYRCEFRIRAKNGSWVWFANYGKIMDRHGDDRGQRFVGVTFN 124 Query: 414 INELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQ 473 I+E KR E+ L + E + ++ + + + + + Sbjct: 125 IDERKRKEEQLIVLEQDTRTLIENSPDTVARYDHECRRIYVNPALASSFPGGAEKILGKK 184 Query: 474 VWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLNKEGEVER 532 PE E I + + + E + KDG + G + Sbjct: 185 PSEIPGGPE-FDKFEAKIVEVFATGNNALFELKWQGKDGKELCNHIRLTAERDSSGRLTS 243 Query: 533 LLGINMDMTEVKQLNEALFQEKERLHITLDSIGE 566 +L I D+TE+ + AL +R + L+++ + Sbjct: 244 VLAIGRDITELYESRAAL----KRANAQLENMND 273 Score = 92.1 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 75/222 (33%), Gaps = 13/222 (5%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + + + + + E R +E S +A E + + N AL E++ G Sbjct: 125 IDERKRKEEQLIVLEQDTRTLIENSPDTVARYDHECRRIYVNPALASSFPGGAEKILGKK 184 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 ++ + +K ++ ++ + N E ++ ++G + + ++ R + G Sbjct: 185 PSEIPGGPEFDKFEAKIVEVFATGNNAL-FELKWQGKDGKELCNHIRLTAERDSSGRLTS 243 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANE------------AGGIGIWEWELKPNIFSW 454 +A DI EL + ++ ++ N+ + + + + Sbjct: 244 VLAIGRDITELYESRAALKRANAQLENMNDLLQSQATSDPLTGLPNRRFMLDRLKHALAS 303 Query: 455 DKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQ 496 R + N++ + + + + + L+ Sbjct: 304 SSRSGREGALLFIDLDNFKTLNDTLGHDVGDQLLQQVAHRLE 345 >UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P6X4_VIBME Length = 919 Score = 810 bits (2092), Expect = 0.0, Method: Composition-based stats. Identities = 116/566 (20%), Positives = 217/566 (38%), Gaps = 23/566 (4%) Query: 546 LNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLH 605 + + + + +S E +V D I +N ++G+ ++ LG + + Sbjct: 347 AMQHMVENLKIAATVFESA-EGMVVTDEKKHILRVNQAFTDITGYQPKDVLGHHIKVIR- 404 Query: 606 ITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPL-STLDGSNIGSVLV 664 + N + + ++ + + ++ ++G Y IT + S + I V+ Sbjct: 405 -SGRHNQSFYDELELQLKTQGSWQGEIFNKRKNGEEYLQWTMITAVISDHEDEIINYVIT 463 Query: 665 IQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRF 724 + D+T+ + ++ A +D LT L NR ++L Q A++++DLD F Sbjct: 464 LIDITQRKAAESKIKQLAFYDQLTGLPNRQLLMERLESARLNSQRNGQYGAILYLDLDDF 523 Query: 725 KAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE------SAR 778 K +ND+ GH GD L ++ +L +R +D +AR+GGDEF ++L + + A Sbjct: 524 KTLNDTRGHDTGDKFLTLVSQRLLDCVRRTDTVARIGGDEFVIILEQLDSDLDIASKRAD 583 Query: 779 FIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRG 838 + +I+ ++ + + H S G+TL E++ AD+A Y +K GR Sbjct: 584 LLCRKILDTLSK-PYYIDNIEHFSTLSIGVTLFLGETKGIDELLKHADLAMYQAKGAGRN 642 Query: 839 RVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWS 898 + P+ A E AAM+ D + N+ + + + +L W Sbjct: 643 THRFFNPEMQAKVLEHAAMAND-IRHALTRNEFTLYYQPQV---THDGQLTGAEALIRWQ 698 Query: 899 CEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKG---ISISLPLSVAGL 954 I F + L L V + Q A S + +++ +S Sbjct: 699 HPKQGTISPIEFIPIAEETGLILPLGEWVLDQACQVLAVWQNSPLTDSLVLAINISAKQF 758 Query: 955 SSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLSQVGR 1010 V +LE L+ P L L + + + E + +L+ G L G Sbjct: 759 HQTGFVQQVLEALQRYRANPDRLKLELTESMLHEDLEDTITKMSQLKKYGVSFSLDDFGT 818 Query: 1011 DLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLV 1070 N LK D L +D ++ N D + I A+ + + IA V Sbjct: 819 GYSSLNYLKRLPLDQLKIDKSFVRDLLTNSHDADIARTIVSLAKSMNLAVIAEGVETQEQ 878 Query: 1071 MDTLSGIGVDLIYGEVIADAQPLDLL 1096 L+ G G + + PL+ Sbjct: 879 RLALASYGCLDFQGYLFSRPVPLEAF 904 Score = 112 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 31/243 (12%), Positives = 77/243 (31%), Gaps = 7/243 (2%) Query: 295 KHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPE 354 +H+ E+ E + GM + + L+ N+A GY +++ G + + Sbjct: 349 QHMVENLKIAATVFESA-EGMVVTDEKKHILRVNQAFTDITGYQPKDVLGHHIKVIRSGR 407 Query: 355 DLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLV-RHTDGTPLYFIAQIED 413 ++E + + ++ E +NG+ ++ V + + ++ + D Sbjct: 408 HNQSFYDELELQLKTQ-GSWQGEIFNKRKNGEEYLQWTMITAVISDHEDEIINYVITLID 466 Query: 414 INELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSW-DKRMFELYEIPPHIKPNW 472 I + K E +QL L + E + S + + + + ++ Sbjct: 467 ITQRKAAESKIKQLAFYDQLTGLPNRQLLMERLESARLNSQRNGQYGAILYL---DLDDF 523 Query: 473 QVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVER 532 + + + ++ L D I + L+ + Sbjct: 524 KTLNDTRGHDTGDKFLTLVSQRLLDCVRRTDTVARIGGDEFVIILEQLDSDLDIASKRAD 583 Query: 533 LLG 535 LL Sbjct: 584 LLC 586 Score = 53.2 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 19/143 (13%), Positives = 49/143 (34%), Gaps = 5/143 (3%) Query: 414 INELKRTEQVNQQLMERI--TLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPN 471 I E + Q ++E + G+ + K +I ++ ++ P Sbjct: 338 IYEYNQVGDAMQHMVENLKIAATVFESAEGMVVTDEKKHILRVNQAFTDITGYQPKDVLG 397 Query: 472 WQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANR--VLNKEGE 529 + Q + L+++ ++ E K+G +++ + + E E Sbjct: 398 HHIKVIRSGRH-NQSFYDELELQLKTQGSWQGEIFNKRKNGEEYLQWTMITAVISDHEDE 456 Query: 530 VERLLGINMDMTEVKQLNEALFQ 552 + + +D+T+ K + Q Sbjct: 457 IINYVITLIDITQRKAAESKIKQ 479 >UniRef50_C5V280 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V280_9PROT Length = 725 Score = 810 bits (2092), Expect = 0.0, Method: Composition-based stats. Identities = 134/580 (23%), Positives = 237/580 (40%), Gaps = 23/580 (3%) Query: 532 RLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWT 591 ++ +N ++ E+ QE + + ++ D I +N ++G++ Sbjct: 135 QVSTLNSELDEMLHKQRETEQELLISATAFE-AQDGIMITDSKGVILRVNQAFTDITGYS 193 Query: 592 QEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPL 651 EEA+G + + + ++ + ++ ++G Y +IT + Sbjct: 194 SEEAVGQTPRLLK--SGRHDADFYAAMWQCIKNTGQWSGEIWDRRKNGEIYPKWLTITEV 251 Query: 652 STLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTH 711 + DGS + V D+T + ++ A +D LT L NR +LR + Sbjct: 252 KSFDGSVVHYVSSQVDITARKASEDRIHNLAFYDPLTQLPNRRLLLDRLRHSVSFSLRDG 311 Query: 712 QRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPD 771 + AL+FIDLD+FK +ND+ GH GD LL+++A L+ +R+ D +ARLGGDEF +LL Sbjct: 312 RHVALMFIDLDKFKKINDTLGHDIGDLLLKQVAERTLTCVRTCDTVARLGGDEFVVLLDG 371 Query: 772 C------NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQA 825 A+ I +II +N + G ++ GAS GI L D++ A +++ QA Sbjct: 372 LAGNLHEAAAQAKQIGRKIIDTLNQS-YDLAGHEYQSGASIGIALFDEHCQTAEDLLKQA 430 Query: 826 DIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPE 885 DIA Y +K GR + ++P+ A+ R A+ D + + Q + V S E Sbjct: 431 DIAMYQAKKAGRNTLRFFDPEMQASILARVALEKDF-KDALLQEQFYICYQPVIS---RE 486 Query: 886 ARNLWLISLKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV---ASK 941 R +L W I+ F + L L V +Q + ++ Sbjct: 487 GRVAGAEALVRWRHSIRGIVSPADFIPLAEETGLIVPLGNWVLKTACRQLSDWSSRDDTR 546 Query: 942 GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLR 997 ++I++ +S L V ++ +E + PR L L + ++ AE + L+ Sbjct: 547 DLTIAVNVSARQLKQEDFVTTVMGLIEETGANPRRLKLELTESMLVSDAESIIVKMNLLK 606 Query: 998 LAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLG 1057 AG L G L D L +D N++ ++ A L Sbjct: 607 EAGITFALDDFGTGYSSLAYLSRLPLDQLKVDQSFVRNIETEDSAVVICAATINLAHNLK 666 Query: 1058 MKTIAGPVVLPLVMDTLSG-IGVDLIYGEVIADAQPLDLL 1096 +K +A V LS D + G + + +D Sbjct: 667 LKVVAEGVENEAQRYFLSSVHQCDFLQGYLFSKPVAIDEF 706 Score = 163 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 61/387 (15%), Positives = 133/387 (34%), Gaps = 18/387 (4%) Query: 149 GDDPLRAFLIWVLSESI-GALALVPLGLLFKPHYLLRHRNPRLLFESLLTLAITLTLSWL 207 + L +I L+ I A+A V GL + + LA+ + + + Sbjct: 16 WIELLFTVVIMSLALFIRLAIAPVDAGLQYVTFFPAITLAAIFWGCRAGLLAMAMGVGFA 75 Query: 208 SMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSH 267 + ++P ++F L A L+FL ++VS + A L Sbjct: 76 TYFFIPPFYSFENEGLKIMAWSN------LVFLVDGLLVSFSIEAMHRYRKKSEVEL--A 127 Query: 268 MPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQT 327 L + + + +++ R + + S A E + G+ + ++G L+ Sbjct: 128 EIKLAHSQVSTLNSELDEMLHKQRETEQELLIS----ATAFE-AQDGIMITDSKGVILRV 182 Query: 328 NKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDV 387 N+A GYS EE G T + L + + I +S E +NG++ Sbjct: 183 NQAFTDITGYSSEEAVGQTPRLLKSGRHDADFYAAMWQCIKN-TGQWSGEIWDRRKNGEI 241 Query: 388 VWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWEL 447 L ++ V+ DG+ +++++ DI K +E L L + + Sbjct: 242 YPKWLTITEVKSFDGSVVHYVSSQVDITARKASEDRIHNLAFYDPLTQLPNRRLLLDRLR 301 Query: 448 KPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSR-SPFKLEFR 506 S+ R + ++ + + + K + + + R Sbjct: 302 HS--VSFSLRDGRHVALMFIDLDKFKKINDTLGHDIGDLLLKQVAERTLTCVRTCDTVAR 359 Query: 507 ITVKDGIRHIRALANRVLNKEGEVERL 533 + + + + LA + + +++ Sbjct: 360 LGGDEFVVLLDGLAGNLHEAAAQAKQI 386 Score = 64.7 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 25/189 (13%), Positives = 61/189 (32%), Gaps = 14/189 (7%) Query: 366 LISGEINTYSME--KRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQV 423 L+ G + ++S+E RY ++ + ++ ++ + D K+ E Sbjct: 102 LVDGLLVSFSIEAMHRYRKKS------EVELAEIKLAHSQVS-TLNSELDEMLHKQRE-- 152 Query: 424 NQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPED 483 + I+ GI + K I ++ ++ D Sbjct: 153 -TEQELLISATAFEAQDGIMITDSKGVILRVNQAFTDITGYSSEEAVGQTPRLLKSGRHD 211 Query: 484 RQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANR-VLNKEGEVERLLGINMDMTE 542 + +++ + E K+G + + L V + +G V + +D+T Sbjct: 212 AD-FYAAMWQCIKNTGQWSGEIWDRRKNGEIYPKWLTITEVKSFDGSVVHYVSSQVDITA 270 Query: 543 VKQLNEALF 551 K + + Sbjct: 271 RKASEDRIH 279 >UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacteria RepID=A2SDI4_METPP Length = 1006 Score = 808 bits (2089), Expect = 0.0, Method: Composition-based stats. Identities = 177/688 (25%), Positives = 303/688 (44%), Gaps = 20/688 (2%) Query: 418 KRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYE 477 ++ + + E + + +++ + + + + E Sbjct: 305 RQHVHEIEDREAQFRTLYERTPVMMHSVDVERRLVAVNDAWLARLGYERSEVLGRRS-TE 363 Query: 478 CVLPEDRQHAEKVIR-DSLQSRSPFKLEFR-ITVKDGIRHIRALANRVLNKEGEVERLLG 535 + E R+ AE+ I ++ ++++ +T + ++ A + G+ R L Sbjct: 364 FLTAESRERAERSIIPRFMREGELRDMDYQMVTRSGEVLDVQISAIWETDAHGQPLRTLA 423 Query: 536 INMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEA 595 + D+TE K+L L EKER+ +TL SIG+ V+ D A +IT++NPVAE+M G +A Sbjct: 424 VLKDVTEQKRLALELAAEKERIEVTLHSIGDGVISTDEAGRITYLNPVAEQMVGCLLAQA 483 Query: 596 LGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVV---LHCRSGGSYDVHYSITPLS 652 G+P V+ + ++G + + + L RSG Y V S P++ Sbjct: 484 RGLPFAQVVQLFDQESGAPLPSPVEQCLQDREVYGVRESAALRHRSGRDYGVQISAAPIA 543 Query: 653 TLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQ 712 DG +G+V+V QDVTE+R + +++SY A HD LT L NR F+ ++ Q+ + Sbjct: 544 GRDGRVLGAVMVFQDVTEARGLAQKMSYLAHHDGLTGLPNRVLFQDRVHQACQSGRRHGR 603 Query: 713 RHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC 772 R A++F+DLD FK VNDS GHA GD LL+ +A + LR+SD + RLGGDEF +LL D Sbjct: 604 RFAVIFMDLDHFKHVNDSLGHAVGDELLKAVAQRLTGALRASDTICRLGGDEFVVLLSDL 663 Query: 773 NV---ESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIAC 829 + + +A +I+ V + G VGAS GI L + +M +AD A Sbjct: 664 DDVEVDGVAEVAKKILRQVAQ-PCVLGGTEVNVGASLGIALFPGDGEDPDTLMKRADAAM 722 Query: 830 YASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNL 889 Y SK GR R + A S R + D + R + Q ++ V R +A + Sbjct: 723 YRSKREGRNRYHFFSKAVDDAASARLQLEADMR-RALAAGQFIVHYQPVVHGRTRDA--V 779 Query: 890 WLISLKLWSCEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVA--SKGISIS 946 + +L W G + F + L + V + +Q GIS++ Sbjct: 780 AVEALLRWDRAGQGLQSPAVFIPVAEESGLIVPMGHWVLRQACEQLRAWSGTALGGISVA 839 Query: 947 LPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGCR 1002 + +S L+ A V+ + + L + + L I ++ E+ +++L+ G R Sbjct: 840 VNVSPVQLAQADFVDTVADVLHATGVDGSRLEFEITESTLMQDPEATLEMLRRLKGLGVR 899 Query: 1003 IVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIA 1062 I + G LK D L +D +++ + D L+ I A+ L + +A Sbjct: 900 IAIDDFGTGYSSLGHLKRFPVDTLKIDHTFVRDLEADADDRELVRAILAMARSLRLHVVA 959 Query: 1063 GPVVLPLVMDTLSGIGVDLIYGEVIADA 1090 V L+ + G + A Sbjct: 960 EGVETEAQAAILAAMECPAFQGYLFARP 987 Score = 234 bits (598), Expect = 2e-59, Method: Composition-based stats. Identities = 100/535 (18%), Positives = 204/535 (38%), Gaps = 8/535 (1%) Query: 24 LVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRHAGRMWPGIALSCSLGNIAASILL 83 ++ F+F ++ LS+ +A LW+ +++ V WP L+ ++ N+AA++ Sbjct: 35 VLHFVFAYGAIHLSRQPGSVATLWYANAVVAVVLLSRRRAEWPLHLLAMAVANVAANLFS 94 Query: 84 FSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQNLADWLRLALGSAIVPPLLGGVLV 143 L++++ N++EA + A LLR P +Q + L + A+VP L+G + Sbjct: 95 GHAPGLSLSFLLPNLLEASLAAALLRLAGPPARCVQQVGALLWALVLGAVVPSLVGATMG 154 Query: 144 VLLTPG---DDPLRAFLIWVLSESIGALALVPLGLLFKPHYLLRHRNPRLLFESLLTLAI 200 + + W + IG ++++PLGLL + + Sbjct: 155 AAVLSMQFDAPVGSLWSAWFVGTVIGGVSVLPLGLLLLARGGRAVWAALARPAVAAVVLV 214 Query: 201 TLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATP 260 + + + ++ + + ++ V LM A A L + V +++A Sbjct: 215 AVATAASASVFSHFRYVYVSVALMLVAAVGGFAGAATGGLLASLSVGIVIALGLFQPGPG 274 Query: 261 RTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGT 320 +L + +LP +L L+P ++ M R I + E FR E + + M V Sbjct: 275 EGWLETVAFYLPVVLTLVPPLLLAAAMERNRQHVHEIEDREAQFRTLYERTPVMMHSVDV 334 Query: 321 EGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRY 380 E + + N A LGY + E+ G + E + + + E M+ + Sbjct: 335 ERRLVAVNDAWLARLGYERSEVLGRRSTEFLTAESRERAERSIIPRFMREGELRDMDYQM 394 Query: 381 YNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGI 440 R+G+V+ ++ G PL +A ++D+ E KR ERI + + G Sbjct: 395 VTRSGEVLDVQISAIWETDAHGQPLRTLAVLKDVTEQKRLALELAAEKERIEVTLHSIGD 454 Query: 441 GIWEWELKPNIFSWDKRMFELYEIPPHIKPN--WQVWYECVLPEDRQHAEKVIRDSLQSR 498 G+ + I + ++ + + E + LQ R Sbjct: 455 GVISTDEAGRITYLNPVAEQMVGCLLAQARGLPFAQVVQLFDQESGAPLPSPVEQCLQDR 514 Query: 499 SPFKLEFR---ITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEAL 550 + + ++ A + ++G V + + D+TE + L + + Sbjct: 515 EVYGVRESAALRHRSGRDYGVQISAAPIAGRDGRVLGAVMVFQDVTEARGLAQKM 569 Score = 95.1 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 32/259 (12%), Positives = 74/259 (28%), Gaps = 7/259 (2%) Query: 278 LPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGY 337 L + + + ++ + + G+ G+ N Q +G Sbjct: 419 LRTLAVLKDVTEQKRLALELAAEKERIEVTLHSIGDGVISTDEAGRITYLNPVAEQMVGC 478 Query: 338 SQEELRGLTFQQLTWPEDLNKDLQQ---VEKLISGEINTYSME-KRYYNRNGDVVWALLA 393 + RGL F Q+ D VE+ + E +R+G ++ Sbjct: 479 LLAQARGLPFAQVVQLFDQESGAPLPSPVEQCLQDREVYGVRESAALRHRSGRDYGVQIS 538 Query: 394 VSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFS 453 + + DG L + +D+ E + Q L L + + Sbjct: 539 AAPIAGRDGRVLGAVMVFQDVTEARGLAQKMSYLAHHDGLTGLPNRVLF--QDRVHQACQ 596 Query: 454 WDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSR-SPFKLEFRITVKDG 512 +R + + +++ + + K + L R+ + Sbjct: 597 SGRRHGRRFAVIFMDLDHFKHVNDSLGHAVGDELLKAVAQRLTGALRASDTICRLGGDEF 656 Query: 513 IRHIRALANRVLNKEGEVE 531 + + L + ++ EV Sbjct: 657 VVLLSDLDDVEVDGVAEVA 675 >UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6C0_BREBN Length = 708 Score = 808 bits (2089), Expect = 0.0, Method: Composition-based stats. Identities = 147/664 (22%), Positives = 275/664 (41%), Gaps = 18/664 (2%) Query: 442 IWEWELKPNIFSWDKRMFELYEIPPHIKPN--WQVWYECVLPEDRQHAEKVIRDSLQSRS 499 + + K I +++ + + ++ P + K + ++S Sbjct: 45 LAITDHKGIILRANEQFCRISKYERSELIGNDHRILNSGYHP---KSFFKEMWSCIRSGQ 101 Query: 500 PFKLEFRITVKDG-IRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLH 558 ++ E R KDG + N+ GE+ + L I D+T KQ+ + L + +E+ Sbjct: 102 VWRGEIRNCAKDGSYYWVDTTIVPFKNQAGEIYQYLSIRSDITARKQMEDELKRSEEKYR 161 Query: 559 ITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENI 618 I ++ + + I++ + +++P +++ T + L + D I Sbjct: 162 IIAENTSDIISIINLDGEFLYLSPSHKRVWEHTVPDEEIHNLFEWIVEDDRD--IFAYAI 219 Query: 619 YSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQL 678 A ++R + ++ + I P+ +G+ +L+ +DVT+ ++ + Sbjct: 220 QHAFSTRKEYMVECRINTQRNDVIWTESKINPIMDEEGNVTKLLLITRDVTDRKQSEETI 279 Query: 679 SYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDA 738 + A HDALT L NR + +QL + A++F+DLDRFK VNDS GH GD Sbjct: 280 HHLAYHDALTDLPNRRMYVQQLSKEMMQAKRFQSSLAVLFLDLDRFKDVNDSFGHDVGDM 339 Query: 739 LLRELASLMLSMLRSSDVLARLGGDEFGLLLPD-CNVESARFIATRIISAVNDYHFIWEG 797 LL E + + + L+ DV+ARLGGDEF ++ + A +A +I+ + F +G Sbjct: 340 LLIEASKRLQACLKPGDVVARLGGDEFTIMQNQLLDRNEATELAEQIMYQL-QRPFELDG 398 Query: 798 RVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAM 857 V V S GI L + +++ +AD A Y K+ G+ ++P A ER M Sbjct: 399 HVFNVSCSIGIALYPQDGDNPEDLLKRADTALYTVKSRGKNGYDFFDPSMEAKSLERILM 458 Query: 858 SLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDP 916 + + + I++ Q + I + + +L W E II F + Sbjct: 459 ENEMR-KAIEQEQFQIYYQPKID--IATSAMTGMEALVRWVHPELGIIPPNRFIPIAEET 515 Query: 917 ALSHALDRRVFHEFFQQAAKAVASKG-ISISLPLSVAGLSSATLVNDLLEQLENSPLPPR 975 + AL + + +Q + +S+ LS + LV + + L+ + L P Sbjct: 516 GMILALGEWILKQACKQNKNWHDQGYTLKVSVNLSARQIYQKDLVEMIKDILQETKLSPH 575 Query: 976 LLHLIIPAEAIL---DHAESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGEL 1032 L L I + + +Q++R G +I + G F+ +K+ D + +D Sbjct: 576 WLELEITESIFVKMEEATAVLQQIRDIGIQISIDDFGTGYSSFSYIKSLPVDTIKIDASF 635 Query: 1033 CANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQP 1092 ++ N + ++ I AQ L M IA + L + L G D G + + P Sbjct: 636 IRDIHHNQESQAIVKAIVTIAQSLNMNVIAEGIELHDQVAALKENGCDHGQGYLFSKPLP 695 Query: 1093 LDLL 1096 D Sbjct: 696 TDDF 699 Score = 175 bits (445), Expect = 8e-42, Method: Composition-based stats. Identities = 54/299 (18%), Positives = 112/299 (37%), Gaps = 25/299 (8%) Query: 307 AMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKL 366 A++ S I +A+ +G L+ N+ C+ Y + EL G + L +++ Sbjct: 38 ALDQSTI-LAITDHKGIILRANEQFCRISKYERSELIGNDHRILNSGYHPKSFFKEMWSC 96 Query: 367 ISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQ 426 I + E R ++G W + ++ G +++ DI K+ E ++ Sbjct: 97 IRS-GQVWRGEIRNCAKDGSYYWVDTTIVPFKNQAGEIYQYLSIRSDITARKQMEDELKR 155 Query: 427 LMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQH 486 E+ + E I L ++E + ++ E ++ +DR Sbjct: 156 SEEKYRIIAENTSDIISIINLDGEFLYLSPSHKRVWEHTVPDEEIHNLF-EWIVEDDRDI 214 Query: 487 AEKVIRDSLQSRSPFKLEFRITV-KDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQ 545 I+ + +R + +E RI ++ + + N ++++EG V +LL I D+T+ KQ Sbjct: 215 FAYAIQHAFSTRKEYMVECRINTQRNDVIWTESKINPIMDEEGNVTKLLLITRDVTDRKQ 274 Query: 546 LNEALF--------------------QEKERLHITLDSIGEAVVCIDMAMKITFMNPVA 584 E + KE + AV+ +D+ + +N Sbjct: 275 SEETIHHLAYHDALTDLPNRRMYVQQLSKEMMQAKRFQSSLAVLFLDLD-RFKDVNDSF 332 Score = 99.8 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 28/226 (12%), Positives = 79/226 (34%), Gaps = 9/226 (3%) Query: 281 NIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYS-Q 339 + + A + + SE +R E ++ ++++ +G++L + + + ++ Sbjct: 137 LSIRSDITARKQMEDELKRSEEKYRIIAENTSDIISIINLDGEFLYLSPSHKRVWEHTVP 196 Query: 340 EELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRH 399 +E + +D + ++ S Y +E R + DV+W ++ + Sbjct: 197 DEEI-HNLFEWIVEDDRDIFAYAIQHAFSTRKE-YMVECRINTQRNDVIWTESKINPIMD 254 Query: 400 TDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMF 459 +G + D+ + K++E+ L L + ++ +L + KR Sbjct: 255 EEGNVTKLLLITRDVTDRKQSEETIHHLAYHDALTDLPNRR-MYVQQLSKEMMQA-KRFQ 312 Query: 460 ELYEIPPHIKPNWQVWYECVLPEDRQ----HAEKVIRDSLQSRSPF 501 + ++ + + A K ++ L+ Sbjct: 313 SSLAVLFLDLDRFKDVNDSFGHDVGDMLLIEASKRLQACLKPGDVV 358 >UniRef50_Q0VL09 Sensory box protein n=2 Tax=Alcanivorax RepID=Q0VL09_ALCBS Length = 959 Score = 808 bits (2088), Expect = 0.0, Method: Composition-based stats. Identities = 209/997 (20%), Positives = 363/997 (36%), Gaps = 72/997 (7%) Query: 114 WYNPLQNLADWLRLALGSAIVPPLLGGVLVVLLTPGDDPLRAFLIWVLSESIGALALVPL 173 + + L S I LL V++ + G +A+V + Sbjct: 10 PAPQFNGVLNEQCQLLLSGIAELLLLESAAVIILAWVYWHSPVSQPTVLTWFGIIAVVQI 69 Query: 174 GLLFKPHYLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRM 233 LF Y R + + E+L L+ L+ L ++ L S P + Sbjct: 70 ARLFILSYYRRQLDGQ---EALPLFRRMLSALALASPLLIGLAGYLFNPLD-SLFSPPML 125 Query: 234 EAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAE 293 A L+ + + L T SH P + LI+L + + + Sbjct: 126 GAQLVLICLGL----------GLSTTALVAYSSHFPTVFLYLIMLLGPAVARLSETQQHS 175 Query: 294 RKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWP 353 + + + +A + G + LQ N + Sbjct: 176 QLALVLLMSLLGLFFLVAARRINHTGHKAMMLQANN---------------RSLIDYLNR 220 Query: 354 EDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIED 413 D + + + ++ EI Y ++ ++ T+ + E Sbjct: 221 --ARSDAEALNEKLAQEI--------YDRKDARQR--------LQDTNDRLESMV--QER 260 Query: 414 INELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNW- 472 L T ER+ LA EA IG+W+W L + L N+ Sbjct: 261 TRALGETNTALAATSERLELALEASNIGLWDWMLDTGLNHHTN-FDRLLGYDSAYFKNFF 319 Query: 473 QVWYECVLPEDRQHAEKVIRDSLQSRSP-FKLEFRITVKDGIRHIRALANRV--LNKEGE 529 V P+D + + + P + +R+ DG RV ++ G Sbjct: 320 GDLDTLVHPDDLARIRQAMVSHFKGEDPRYHAVYRLRHADGSWRWIEDEGRVVSRSESGR 379 Query: 530 VERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSG 589 R++G D+TE +Q E + ++ E + +D + +N E+++G Sbjct: 380 AIRMIGTRRDITEDRQAQEQ----QRLAATVFENAPEGIFILDHKFRFLAVNTRFEQITG 435 Query: 590 WTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSIT 649 +T+ +G + N + I +A E ++ R+G Y ++ Sbjct: 436 YTESLLIGR--RILEEEGAQANREIYLEITAALLDNGFWEGEINERRRNGEIYPEWLQMS 493 Query: 650 PLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNS 709 + I V ++ D+T ++ +QL + +++D LT LANR F + L L Sbjct: 494 AVRDEQKRVIRYVGMMSDLTARKETEQQLQFLSNYDRLTGLANRTQFREHLHKSLTLARL 553 Query: 710 THQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLL 769 Q+ AL+ IDLDRFK +N+S GH GD LL+ A M + LAR+GGDEF LLL Sbjct: 554 NRQKVALLMIDLDRFKPINESLGHEIGDRLLKAAAERMAQHAGGQESLARVGGDEFTLLL 613 Query: 770 PDCNVE-SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIA 828 + E S ++I+A+ F+ +G +GAS GI++ D +A +++Q+D+A Sbjct: 614 ENHGSEGSISQQCQQLINAM-KKPFLIDGHELLLGASIGISIFPDTAKEAQSMINQSDMA 672 Query: 829 CYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARN 888 Y +K G Y A E+ A+ + + I +N+ ++ + + R Sbjct: 673 VYQAKRSGGNNFQFYRSNMRVASVEQLALETSLR-KAIFKNEFVVHYQPKMN--LASNRI 729 Query: 889 LWLISLKLWSCEG-EIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA--VASKGISI 945 + +L W ++ F + L A+ V +QA K I + Sbjct: 730 TSVEALVRWQHPTMGLLPPADFIPLAEETGLISAIGELVLERSCRQAHKWQKQGLGEICV 789 Query: 946 SLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRLAGC 1001 S+ LS + + L + L P LL L + I++ E +Q+LR G Sbjct: 790 SVNLSAHQFRKGNVAETIDRVLSTTELSPHLLELELTESLIMEDMEQNIELLQQLRSRGV 849 Query: 1002 RIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTI 1061 + L G + LK D L +D + N D + I A L M I Sbjct: 850 ELALDDFGTGYSSLSYLKRFPVDTLKIDRSFIMELDKNPDDAAITRAIIDMAHSLKMNVI 909 Query: 1062 AGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 A V + L + D I G +I+ P L+ Sbjct: 910 AEGVETADHLSILRDMHCDSIQGYLISRPVPESELLE 946 >UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K234_DESAC Length = 766 Score = 808 bits (2088), Expect = 0.0, Method: Composition-based stats. Identities = 141/727 (19%), Positives = 271/727 (37%), Gaps = 39/727 (5%) Query: 393 AVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIF 452 ++S ++ G+ F + L+ + E GIW + + N+ Sbjct: 46 SLSKLQTWKGSVFVFCTAMVLFFLLRNAIKRALYGEALFRKVVETIPTGIWVVDREGNVV 105 Query: 453 SWDKRMFELY------------EIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSP 500 + L I+ W + V P++ + + R R Sbjct: 106 DCNFAAHGLLQEFGIQAYNDIQGYA-EIQGWWSDNGQPVHPDEWGISRSLSRGETCLREK 164 Query: 501 FKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHIT 560 + R + + + ++ G + + + D+TE ++ +E L R + Sbjct: 165 IDI---ACTDGVRRTVLYTSLPLKSENGAITGAMALVQDITEKRKTDEVL----RRFRFS 217 Query: 561 LDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYS 620 ++ EA+ I+ + F+N A G++ E + L + + Sbjct: 218 IEQASEAIFWINDEGRFLFVNDQACHSLGYSASELESLHLWDI---DPDFPAERWAEQWE 274 Query: 621 ADTSRSAIEQDVVLHCRSGGSYDVHYSIT-PLSTLDGSNIGSVLVIQDVTESRKMLRQLS 679 S + + G + V S + L + V ++D+T +K ++L Sbjct: 275 RMKSDPKQVFETRHQRKDGRIFPVEVSASQCLFNNE---ENHVAFVRDITIRKKYEKELE 331 Query: 680 YSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDAL 739 + ++HDALT LANR + +++ + + A+ +DLDRFK +NDS GH+ GDA+ Sbjct: 332 HQSNHDALTGLANRVLLDDRIQQAIVHAERAQRNTAVFLLDLDRFKVINDSLGHSQGDAV 391 Query: 740 LRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGR 798 L +A + + + D L+RLGGDEF +++ + AR +A +I++A F R Sbjct: 392 LLAVAERLSACISPGDTLSRLGGDEFAIVMTHVNHPADARIMAQKILNAFEQ-PFPLGNR 450 Query: 799 VHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMS 858 R+ S G +L + Q+ +++ AD A Y +K G + + + Sbjct: 451 ELRITTSIGASLYPRDGEQSEDLLRHADAAMYQAKKQGGNGFQFCSEEMDTRAHKALELE 510 Query: 859 LDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPA 917 D + + ++ ++ +I + +L W + +I F + Sbjct: 511 GDLR-QALQLGSFVLHYQPKV--KIASGKIDGCEALVRWNHPDKGMISPDDFIPLAEETG 567 Query: 918 LSHALDRRVFHEFFQQAAKAVAS--KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPR 975 L AL V E +Q A I I++ LS + V + L + P Sbjct: 568 LIIALGEWVLREACRQFKAWQAQGLPPIKIAVNLSARQFLQSDFVESIQTILHEFDIDPH 627 Query: 976 LLHLIIPAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGE 1031 L L + +++ + + +L+ G + L G N L+ D L +D Sbjct: 628 WLDLELTESMVMEDPDRIAKLLAELKQIGFALSLDDFGTGYSSLNYLRRFPIDCLKIDRS 687 Query: 1032 LCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQ 1091 +V + + + G A LG+ IA V L+ D I G + + Sbjct: 688 FILDVASDATAASVANSVIGIAHSLGIHAIAEGVETREQYAFLAMCECDSIQGYLFSKPL 747 Query: 1092 PLDLLVN 1098 P + L Sbjct: 748 PANDLAA 754 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 56/370 (15%), Positives = 116/370 (31%), Gaps = 41/370 (11%) Query: 234 EAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAE 293 L + ++ + + L L W + + A ++ + R Sbjct: 17 GIALTYALISLLWIYLSDSLLLALGIDLLSLSKLQTWKGSVFVFCTAMVLFFL---LRNA 73 Query: 294 RKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFL------------GYSQEE 341 K E FR +E G+ +V EG + N A L GY E Sbjct: 74 IKRALYGEALFRKVVETIPTGIWVVDREGNVVDCNFAAHGLLQEFGIQAYNDIQGY--AE 131 Query: 342 LRGLTFQQL---TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVR 398 ++G + P++ + + +S + +G L ++ Sbjct: 132 IQG-WWSDNGQPVHPDEWG-----ISRSLSRGETCLREKIDIACTDGVRRTVLYTSLPLK 185 Query: 399 HTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRM 458 +G +A ++DI E ++T++V + R + E I+ + + + Sbjct: 186 SENGAITGAMALVQDITEKRKTDEVLR----RFRFSIEQASEAIFWINDEGRFLFVNDQA 241 Query: 459 FELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRA 518 + +W + P+ + ++S E R KDG Sbjct: 242 CHSLGYSASELESLHLWD--IDPDFPAERWAEQWERMKSDPKQVFETRHQRKDGRIFPVE 299 Query: 519 LANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKE------RLHITL--DSIGEAVVC 570 ++ E + D+T K+ + L + + L D I +A+V Sbjct: 300 VSASQCLFNNEENH-VAFVRDITIRKKYEKELEHQSNHDALTGLANRVLLDDRIQQAIVH 358 Query: 571 IDMAMKITFM 580 + A + T + Sbjct: 359 AERAQRNTAV 368 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 36/252 (14%), Positives = 80/252 (31%), Gaps = 10/252 (3%) Query: 276 ILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFL 335 + A + + R + + FR ++E ++ + + EG++L N C L Sbjct: 190 AITGAMALVQDITEKRKTDEVLR----RFRFSIEQASEAIFWINDEGRFLFVNDQACHSL 245 Query: 336 GYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVS 395 GYS EL L + + +Q E++ S + E R+ ++G + ++ S Sbjct: 246 GYSASELESLHLWDIDPDFPAERWAEQWERMKSDPKQVF--ETRHQRKDGRIFPVEVSAS 303 Query: 396 LVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWD 455 + +A + DI K+ E+ + L A + + Sbjct: 304 QCLFNNEE--NHVAFVRDITIRKKYEKELEHQSNHDALTGLANR--VLLDDRIQQAIVHA 359 Query: 456 KRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRH 515 +R + ++V + + + + L + D Sbjct: 360 ERAQRNTAVFLLDLDRFKVINDSLGHSQGDAVLLAVAERLSACISPGDTLSRLGGDEFAI 419 Query: 516 IRALANRVLNKE 527 + N + Sbjct: 420 VMTHVNHPADAR 431 >UniRef50_B2JN77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderia RepID=B2JN77_BURP8 Length = 915 Score = 808 bits (2088), Expect = 0.0, Method: Composition-based stats. Identities = 134/565 (23%), Positives = 231/565 (40%), Gaps = 21/565 (3%) Query: 546 LNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLH 605 + + R+ E ++ D I +N K +G+T ++ +G + Sbjct: 341 AEVRESEAELRIAAVAFDSLEGMMVTDADGTILRVNSAFTKCTGYTADDVIGRNPRLL-- 398 Query: 606 ITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVI 665 + + +++ + ++ ++G Y +IT + +DG+ V Sbjct: 399 SSGRHDAAFFRDMWETIHRVGGWQGEIWDRRKNGEIYPKWLTITAVKAVDGNVTHYVGTH 458 Query: 666 QDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFK 725 D+TE + Q+ A DALTHL NR +L+ ++ H AL+F+DLD FK Sbjct: 459 YDITERKLAEEQIKELAFFDALTHLPNRTLLRDRLKQVIALSAQNHTHGALLFVDLDNFK 518 Query: 726 AVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN------VESARF 779 +ND+ GH GD LL ++A +L +R D +AR+GGDEF ++L D + Sbjct: 519 TLNDTLGHDKGDLLLGQVAVRLLGSVREGDTVARMGGDEFVIVLSDLSRNRDEAASETEG 578 Query: 780 IATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGR 839 A ++++A++ + G R AS G TL + E++ Q+D+A Y SK GR Sbjct: 579 AAEKVLTALSR-PYYLAGTEFRTTASIGATLFTGHETSIDELLKQSDLAMYKSKESGRNA 637 Query: 840 VTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-S 898 + ++P ERAA+ + I E+QL++ + R +L W Sbjct: 638 ICFFDPAMQTVVMERAALEAALRRA-IDEDQLLVHYQAQV---LNGNRVTGAEALVRWQH 693 Query: 899 CEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA---VASKGISISLPLSVAGLS 955 + ++ F + L AL RV +Q A+ +SI++ +S L Sbjct: 694 PQHGLVPPAEFIPLAEETGLILALGDRVLDTACRQLAQWSLRPDRAHLSIAVNVSAQQLR 753 Query: 956 SATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLSQVGRD 1011 + V +LE L + P L L + ++D+ E + LR G L G Sbjct: 754 ENSFVTSVLEALARTGADPSRLKLELTESVLVDNVEDIIRKMTLLRTKGVVFSLDDFGVG 813 Query: 1012 LQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVM 1071 + LK L +D +V + D ++ I AQ LG+ IA V Sbjct: 814 YSSLSYLKRLPLGQLKIDRSFVRDVLDDPNDAVIARAIVALAQSLGLGVIAEGVETQAQR 873 Query: 1072 DTLSGIGVDLIYGEVIADAQPLDLL 1096 L+ G G + P++ Sbjct: 874 QFLADAGCHAYQGYLFCRPLPIEDF 898 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 35/246 (14%), Positives = 82/246 (33%), Gaps = 5/246 (2%) Query: 284 TMVMYAFRAERKHISESETHFR--NAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEE 341 + M + ESE R S GM + +G L+ N A + GY+ ++ Sbjct: 330 SRAMRLASKMTAEVRESEAELRIAAVAFDSLEGMMVTDADGTILRVNSAFTKCTGYTADD 389 Query: 342 LRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTD 401 + G + L+ + + + I + + E +NG++ L ++ V+ D Sbjct: 390 VIGRNPRLLSSGRHDAAFFRDMWETIH-RVGGWQGEIWDRRKNGEIYPKWLTITAVKAVD 448 Query: 402 GTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFEL 461 G +++ DI E K E+ ++L L + + + + + + Sbjct: 449 GNVTHYVGTHYDITERKLAEEQIKELAFFDALTHLPNRTLL--RDRLKQVIALSAQNHTH 506 Query: 462 YEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALAN 521 + N++ + + + + L D + + + Sbjct: 507 GALLFVDLDNFKTLNDTLGHDKGDLLLGQVAVRLLGSVREGDTVARMGGDEFVIVLSDLS 566 Query: 522 RVLNKE 527 R ++ Sbjct: 567 RNRDEA 572 Score = 63.9 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 19/134 (14%), Positives = 37/134 (27%), Gaps = 2/134 (1%) Query: 420 TEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECV 479 E + RI G+ + I + + Sbjct: 341 AEVRESEAELRIAAVAFDSLEGMMVTDADGTILRVNSAFTKCTGYTADDVIGRNPRLLSS 400 Query: 480 LPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANR-VLNKEGEVERLLGINM 538 D + + ++ E K+G + + L V +G V +G + Sbjct: 401 GRHDAAFFRDMWETIHRVGG-WQGEIWDRRKNGEIYPKWLTITAVKAVDGNVTHYVGTHY 459 Query: 539 DMTEVKQLNEALFQ 552 D+TE K E + + Sbjct: 460 DITERKLAEEQIKE 473 >UniRef50_A1S8A3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella amazonensis SB2B RepID=A1S8A3_SHEAM Length = 751 Score = 808 bits (2088), Expect = 0.0, Method: Composition-based stats. Identities = 137/675 (20%), Positives = 262/675 (38%), Gaps = 20/675 (2%) Query: 431 ITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKV 490 + +A IW + + ++ +++ P + + V P+ Sbjct: 81 LQSFMDAFDEHIWIKDAEGRYRFINQSTLVSWDLSPAQILSRKDAE--VFPDRVSEYTDT 138 Query: 491 IRDSLQSRSPFKLEFRITV--KDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNE 548 +++ P + I G + + + + +G + ++G D+ K E Sbjct: 139 DLKAVKEGHPIVVAECIDRSLDKGNIWLETIKAPMYDMDGRLLGVIGTTRDIARYKAAEE 198 Query: 549 ALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITF 608 LF ++ E V+ D IT +N E ++G++++E +G + + Sbjct: 199 QLF----LTSKVFENAIEGVMITDSNGIITEINGAFETITGYSRDEVIGKTPKLL--NSG 252 Query: 609 GDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDV 668 EN++ A ++ ++ ++G + SI+ + DG V V D+ Sbjct: 253 RHERDFFENLWRALKTQGHWHGEIWNRRKNGTLFAEQTSISAVYGEDGQVRCFVAVFSDI 312 Query: 669 TESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVN 728 + ++ +++ A HD LT L NR+ + ++ + R AL+ ID+D FK +N Sbjct: 313 SLLKQTEAEVAQLAWHDPLTRLPNRSKLTTISQQQIKLAANRKTRLALLLIDVDLFKHIN 372 Query: 729 DSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAV 788 DS GH AGD +L L+ + ++L + D LAR+GGDEF LL + I + I A Sbjct: 373 DSFGHLAGDKVLLSLSERLAALLGAEDTLARIGGDEFVLLTQVRRRDDIPVILSAIQRAF 432 Query: 789 NDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQA 848 + EG R+ AS GI + D+ ++ AD A Y +K GR R Y Q Sbjct: 433 DTSFDTSEGESVRLSASIGIAVYPDDGDNPDTLLKNADAAMYRAKQQGRNRHAFYTEQMT 492 Query: 849 AAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQ 907 + ++ + + +K + L ++ + R + + + +L W E ++ Sbjct: 493 QSSMQQLRLQTALRG-AVKNSALSLVYQPKINLR--TRKLIGVEALCRWTDHELGVVSPA 549 Query: 908 TFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK--GISISLPLSVAGLSSATLVNDLLE 965 F L + V E +QA +++ +S + L+ + + Sbjct: 550 EFIPVAESIGLMPEIGLWVLKEACRQARIWRDQGLNPGRMAVNVSGSQLTGDNFADSVAR 609 Query: 966 QLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRLAGCRIVLSQVGRDLQIFNSLKAN 1021 L + L P L L I +LD+ +++ KLR G + L G + L+ Sbjct: 610 VLTQTGLSPDALELEITESVVLDNPASAIDTMDKLRGMGVSLALDDFGTGYSSLSYLRKL 669 Query: 1022 MADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDL 1081 + L +D + + + I + L + IA V + L +G Sbjct: 670 PLNKLKIDQSFVRELPTDQDSGAIAMAIIAMGEALKLGVIAEGVENETQAEFLLRLGCTE 729 Query: 1082 IYGEVIADAQPLDLL 1096 G + A L Sbjct: 730 AQGYLFARPLLASEL 744 Score = 139 bits (351), Expect = 7e-31, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 85/259 (32%), Gaps = 12/259 (4%) Query: 278 LPANIMTMVMYAFRAER-KHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLG 336 + ++ ++ R K E E + G+ + + G + N A G Sbjct: 176 MDGRLLGVIGTTRDIARYKAAEEQLFLTSKVFENAIEGVMITDSNGIITEINGAFETITG 235 Query: 337 YSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSL 396 YS++E+ G T + L + + + + + + E +NG + ++S Sbjct: 236 YSRDEVIGKTPKLLNSGRHERDFFENLWRALKTQ-GHWHGEIWNRRKNGTLFAEQTSISA 294 Query: 397 VRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDK 456 V DG F+A DI+ LK+TE QL L + + + ++ Sbjct: 295 VYGEDGQVRCFVAVFSDISLLKQTEAEVAQLAWHDPLTRLPNRSKLTTISQQQIKLAANR 354 Query: 457 RMF-ELYEIPPHIKPNWQVWYECVLPE---------DRQHAEKVIRDSLQSRSPFKLEFR 506 + L I + + + + + + F L + Sbjct: 355 KTRLALLLIDVDLFKHINDSFGHLAGDKVLLSLSERLAALLGAEDTLARIGGDEFVLLTQ 414 Query: 507 ITVKDGIRHIRALANRVLN 525 + +D I I + R + Sbjct: 415 VRRRDDIPVILSAIQRAFD 433 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 33/251 (13%), Positives = 79/251 (31%), Gaps = 7/251 (2%) Query: 303 HFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQ 362 ++ M+ + + EG++ N++ S ++ ++ Sbjct: 80 LLQSFMDAFDEHIWIKDAEGRYRFINQSTLVSWDLSPAQILSRKDAEVFPDRVSEYTDTD 139 Query: 363 VEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQ 422 ++ + G E + + +W + + DG L I DI K E+ Sbjct: 140 LKAVKEG-HPIVVAECIDRSLDKGNIWLETIKAPMYDMDGRLLGVIGTTRDIARYKAAEE 198 Query: 423 VNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPE 482 + E G+ + I + + Sbjct: 199 QL----FLTSKVFENAIEGVMITDSNGIITEINGAFETITGYSRDEVIGKTPKLLNSGRH 254 Query: 483 DRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA-NRVLNKEGEVERLLGINMDMT 541 +R E + R +L+++ + E K+G + + V ++G+V + + D++ Sbjct: 255 ERDFFENLWR-ALKTQGHWHGEIWNRRKNGTLFAEQTSISAVYGEDGQVRCFVAVFSDIS 313 Query: 542 EVKQLNEALFQ 552 +KQ + Q Sbjct: 314 LLKQTEAEVAQ 324 Score = 63.2 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 16/123 (13%), Positives = 39/123 (31%), Gaps = 2/123 (1%) Query: 556 RLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLM 615 L +D+ E + D + F+N + + L V + Sbjct: 80 LLQSFMDAFDEHIWIKDAEGRYRFINQSTLVSWDLSPAQILSRKDAEVFP--DRVSEYTD 137 Query: 616 ENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKML 675 ++ + + + + G+ + P+ +DG +G + +D+ + Sbjct: 138 TDLKAVKEGHPIVVAECIDRSLDKGNIWLETIKAPMYDMDGRLLGVIGTTRDIARYKAAE 197 Query: 676 RQL 678 QL Sbjct: 198 EQL 200 >UniRef50_Q607V4 Sensory box protein/GGDEF domain protein n=1 Tax=Methylococcus capsulatus RepID=Q607V4_METCA Length = 819 Score = 808 bits (2087), Expect = 0.0, Method: Composition-based stats. Identities = 141/689 (20%), Positives = 258/689 (37%), Gaps = 25/689 (3%) Query: 423 VNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPE 482 +Q +R+ + +A + + ++ ++ E + + V P+ Sbjct: 140 ERKQAEQRLRMLIDAEPECVKTVGADGTLLDMNRAGLQMIEAESIEEVRGKPITSLVAPQ 199 Query: 483 DRQHAEKVIRDSLQSRSPFKLEFRITV-KDGIRHIRALANRVLNKEGEVERLLGINMDMT 541 D + + + L S LEF+I K G R + + A ++ G + +L + D+T Sbjct: 200 DVERFKAFNQRVLAGESGI-LEFQIIGLKGGRRWLESHAVPFASRPGAPDAVLAVTRDVT 258 Query: 542 EVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLL 601 E K EA+ + EA++ D A + +N ++G+T +E +G Sbjct: 259 ERKLAEEAV----RLAATAFE-TSEAIMITDAAGIVQRVNSGYSAITGYTSDEIVG-TPS 312 Query: 602 TVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGS 661 LH + I A + ++ ++G V SI + + Sbjct: 313 EFLHPGGEEGKTSPRAILEALKGTDCWKGELTARRKNGDVCPVWLSIKAVRNDEQILTHY 372 Query: 662 VLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDL 721 V+ D++E ++ +++ A D LT L NR F ++L + R +L+F+DL Sbjct: 373 VVTFVDISERKRAQQEIEQLAYFDPLTGLPNRRLFLERLNQAIGESCVNGSRCSLLFVDL 432 Query: 722 DRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVE------ 775 DRFK +ND+ GH GD LLR++A + + ++ARLGGDEF +LL + E Sbjct: 433 DRFKHLNDARGHTVGDQLLRKVAERLSEGVGRGGMVARLGGDEFVILLNGLDEEFESACR 492 Query: 776 SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNG 835 +A + + F+ H V AS G + + A +++ AD+A Y +K Sbjct: 493 RTMDVAENLR-VILQRPFVLSSGQHYVTASIGTAIYPFDTDSADDLLKAADMAMYEAKAS 551 Query: 836 GRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLK 895 GR V Y AA R + D ++ + + R + +L Sbjct: 552 GRNTVRAYASTMQAAAETRLTLERDM-HAALERREFRLYLQSQVD---GNGRIVGAEALL 607 Query: 896 LW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKA-VASKGISISLPLSVAG 953 W I+ F + L + VF + + + A +S+S+ +S Sbjct: 608 RWEHPTEGILLPDKFIALAEETGLILPIGEWVFEQVCHENVRLSQAGHRLSLSVNISPRR 667 Query: 954 LSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH----AESVQKLRLAGCRIVLSQVG 1009 A ++ + L+ + P L I ++ + L G R + G Sbjct: 668 FQQADFLDHVQRILKRTGANPHDLIFEITEGLLVSDFDDAIAKMSFLERLGIRFSVDDFG 727 Query: 1010 RDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPL 1069 LK L + ++ + D L+ I A L ++T+A V Sbjct: 728 TGYSSLAYLKRLPLSELKIAQTFVNDLPDDPSDVALVQTILSMAYHLNLETVAEGVETRA 787 Query: 1070 VMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 ++ L G G + P Sbjct: 788 QLEFLKARGCTRFQGYYFSPPLPATEFFE 816 Score = 147 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 64/400 (16%), Positives = 135/400 (33%), Gaps = 27/400 (6%) Query: 168 LALVPLGLLFKPHYLLRHRNPRLLFE--------SLLTLAITLTLSWLSMLYLPWPF--- 216 + + L + PH P LL+ + AI++ L + + F Sbjct: 4 ITALKSSLGYLPHGYCYAWVPELLWLHVISDLVIAAAYCAISIALLYFAKRRRDVVFRSV 63 Query: 217 TFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLI 276 + L + + M A+ ++ + ++ + P +P L Sbjct: 64 FLLFGLFILACAGTHFMGAWTVWYPAYWTDGAIKVITAAVSFGT---AILVWPLIPRALE 120 Query: 277 LLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLG 336 + + + +E ++E R ++ + VG +G L N+A Q + Sbjct: 121 IPSPRQLLELNQHLASEVSERKQAEQRLRMLIDAEPECVKTVGADGTLLDMNRAGLQMIE 180 Query: 337 Y-SQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVS 395 S EE+RG L P+D+ + +++++GE +E + G W Sbjct: 181 AESIEEVRGKPITSLVAPQDVERFKAFNQRVLAGESGI--LEFQIIGLKGGRRWLESHAV 238 Query: 396 LVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWD 455 G P +A D+ E K E+ R+ I + + + Sbjct: 239 PFASRPGAPDAVLAVTRDVTERKLAEEAV-----RLAATAFETSEAIMITDAAGIVQRVN 293 Query: 456 KRMFELYEIPPHIKPNWQVWYECVLP--EDRQHAEKVIRDSLQSRSPFKLEFRITVKDG- 512 + E + P E+ + + + I ++L+ +K E K+G Sbjct: 294 SGYSAITGYTSDEIVG--TPSEFLHPGGEEGKTSPRAILEALKGTDCWKGELTARRKNGD 351 Query: 513 IRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQ 552 + + V N E + + +D++E K+ + + Q Sbjct: 352 VCPVWLSIKAVRNDEQILTHYVVTFVDISERKRAQQEIEQ 391 Score = 119 bits (298), Expect = 9e-25, Method: Composition-based stats. Identities = 46/298 (15%), Positives = 94/298 (31%), Gaps = 15/298 (5%) Query: 249 MMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMT----MVMYAFRAERKHISESETHF 304 ++A + +L L WL + + + + ERK E+ Sbjct: 211 VLAGESGILEFQIIGLKGGRRWLESHAVPFASRPGAPDAVLAVTRDVTERKLAEEAVRLA 270 Query: 305 RNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWP--EDLNKDLQQ 362 A E S + + G + N GY+ +E+ G T + P E+ + Sbjct: 271 ATAFETS-EAIMITDAAGIVQRVNSGYSAITGYTSDEIVG-TPSEFLHPGGEEGKTSPRA 328 Query: 363 VEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQ 422 + + + G + + E +NGDV L++ VR+ + +++ DI+E KR +Q Sbjct: 329 ILEALKG-TDCWKGELTARRKNGDVCPVWLSIKAVRNDEQILTHYVVTFVDISERKRAQQ 387 Query: 423 VNQQLMERITLANEAGGIGIWE-WELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLP 481 +QL L E + L + + + Sbjct: 388 EIEQLAYFDPLTGLPNRRLFLERLNQAIGESCVNGSRCSLLFVDLDRFKHLNDARGHTVG 447 Query: 482 EDR-----QHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLL 534 + + + + EF I + + R ++ + +L Sbjct: 448 DQLLRKVAERLSEGVGRGGMVARLGGDEFVILLNGLDEEFESACRRTMDVAENLRVIL 505 >UniRef50_Q21UE9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Comamonadaceae RepID=Q21UE9_RHOFD Length = 1114 Score = 807 bits (2086), Expect = 0.0, Method: Composition-based stats. Identities = 191/1068 (17%), Positives = 388/1068 (36%), Gaps = 50/1068 (4%) Query: 56 AFYRHAGRMWPGIALSCSLGNIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWY 115 + + L + LL L+ T ++E + ++ Sbjct: 64 SLLLVGFDVQAEQLLGKACAPFLGQPLLMLLPGLSATELPAALLEVALHGGVIEPRSLLG 123 Query: 116 NPLQNLADWLRLALGSAIVPPLLGGVLVVLLTPGDDPLRAFLIWVLSESIGALALVPLGL 175 L + + + P V + G +A + + + P+ + Sbjct: 124 EGLLSGKS---FTFFAFQLAPARAVVKFW-DSAGALETQALRMRSQQQLAAVFSQSPVAI 179 Query: 176 LFKPHYLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEA 235 + + + L L++ L S+ WP + A R+ Sbjct: 180 SLSRERDGAYVDVNEQWTLLTGLSLQEVLGRTSVELGLWPDGTAHDDALAQAGEGARLRN 239 Query: 236 FLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYA----FR 291 + L++ + + + T +L +L + P M + A + Sbjct: 240 LDLPFVRQDGRQLVLQINAARIEIGHTA-----YFLSYLKDVTPERAMQAELLASEQLLK 294 Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTF-QQL 350 + + +++ F + +A+G G + L+ +K + + G + + + + Sbjct: 295 STNERLNQQIHLFESMENLAAVGYWTSGADPATLRWSKGMYRLAGLAPGSVMHRSVGRSR 354 Query: 351 TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQ 410 ED K Q + + G I Y E + +G + W + G + F Sbjct: 355 IRAEDQEKFAQA-RRAVDGAIVEYQWE----HPDGRMHWHRSRMQHGSGEGGEAIVF-GV 408 Query: 411 IEDINELKRTEQVNQQLMERITLANEAGGIGIWEW----ELKPNIFSWDKRMFELYEI-- 464 ++D+ + Q + I +++ + + + E++ Sbjct: 409 VQDVTHERAAALALQDRLGFIQNITSRVPGMVFQLRLKTDGRFQFGYVSDLVREIFRGVS 468 Query: 465 PPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRV 523 P I + + P+D I+ S + P++ E+R+ +DG +R + A Sbjct: 469 PEQIMQDAAGILKLHHPDDVSEFIASIKASARELKPWRHEYRLRFEDGEVRWLLGQATPE 528 Query: 524 LNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPV 583 +G V G+ D+T KQ E L + + R + + D + ++ Sbjct: 529 READGTVL-WNGLITDITARKQSEERLRESEARFRALTELSSDWYWEQDAQFRFVRLDGS 587 Query: 584 AEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIE-QDVVLHCRSGGSY 642 ++ ++ LG + G + + + +++ G Sbjct: 588 SQTSMRLPEDNYLG--VTRWETDAQGVSQAQWAAHRAVLQAHETFHDFEMLCTDAVGCLT 645 Query: 643 DVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRI 702 V S TP+ + G G + +D++E ++ ++ A +D LT L NR +L+ Sbjct: 646 WVAISGTPIFDVQGQFKGYRGIGRDISERKRAEEKIERLAFYDVLTDLPNRRLLMDRLQQ 705 Query: 703 LLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGG 762 L + H AL+FIDLD FK +ND+ GH GDALL+++A +L+ +R +D +ARLGG Sbjct: 706 ALVSSAREHGAGALLFIDLDNFKDLNDTQGHDVGDALLQQVAKRLLASVRETDTVARLGG 765 Query: 763 DEFGLLLPDCNVESA------RFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNH 816 DEF ++L A + +I++ +N + H S G+TL D+ Sbjct: 766 DEFVVMLQGLERTQADAITQVEQVGRKIMAQLNQ-PYRLGSAEHHSTPSIGVTLFDNQQQ 824 Query: 817 QAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAH 876 +++ QAD+A Y +K+ GR + ++P A ++R A+ L+ + + ++L++ Sbjct: 825 TLDDLLKQADLAMYEAKSAGRNTLRFFDPTMQALVTQRTALELELR-HGLARDELVLFYQ 883 Query: 877 GVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAA 935 V +AR + + +L W + ++ F L L + V Q Sbjct: 884 PVVD---QDARVVGVEALVRWQHPQRGLVAPLAFIPMAEQTGLILPLGQWVLRVACLQLV 940 Query: 936 KA---VASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE- 991 A++ +++++ +S V +L L + P+ L + + +L + Sbjct: 941 SWSAQAATERLTMAVNVSARQFRQPEFVQQVLTMLRQTGANPKRLKMELTESLLLTDTQD 1000 Query: 992 ---SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITI 1048 + +LR G R L G + LK L +D +V + D + Sbjct: 1001 AIAKMSELRDVGVRFSLDDFGTGYSSLSYLKLLPLQQLKIDQSFVRDVLTDPNDAAIART 1060 Query: 1049 IQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 + Q LG+ +A V D L G G + P+ L Sbjct: 1061 VLALGQSLGLGVVAEGVETVGQRDFLLQHGCTRFQGYLFGKPVPIAQL 1108 >UniRef50_A6QA23 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QA23_SULNB Length = 703 Score = 806 bits (2084), Expect = 0.0, Method: Composition-based stats. Identities = 160/690 (23%), Positives = 277/690 (40%), Gaps = 30/690 (4%) Query: 425 QQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNW-QVWYECVLPED 483 +++ ER LA I +W++ + E+ PN W + P D Sbjct: 11 EKIKERFELALCGSKTSILDWDMVNHTLYISPSWKEMLGYREDELPNAESTWKKLAYPRD 70 Query: 484 RQHAEKVIRDSLQ-SRSPFKLEFRITVKDGIR-HIRALANRVLNKEGEVERLLGINMDMT 541 + + ++ ++ R F+ R+ KDG + A + ++ G R++G + D+T Sbjct: 71 IVNVMRSLKKHIREHRKVFENNHRLRHKDGHWIWVLGRARIIYDEAGNPIRMVGTHTDIT 130 Query: 542 EVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLL 601 E K+L Q+ L+ I +AV+ +DM I N +E + + +E +G Sbjct: 131 EEKELQLKYSQQ----AQVLEQIHDAVILLDMDGFIRSWNKGSEILFEYRADEVIGKNFS 186 Query: 602 TVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGS 661 + E S + ++ L +SG +S + L +G Sbjct: 187 ILFSDNI---TSAYEKWISELKENGEYKGEMFLQKKSGEPLYAVFSFSLLKNQNGETTEV 243 Query: 662 VLVIQDVTESRKMLR-------QLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRH 714 V +I D+TE +K L Y A HDALT L NR F +L ++ + + Sbjct: 244 VSLIHDITEQKKAEAVLQEQKNILRYQAHHDALTRLPNRVLFFDRLEQSIRKTARSEKDF 303 Query: 715 ALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-N 773 AL FIDLD+FK +NDS GH+ GD +LR A + +R D LARL GDEF +++ D + Sbjct: 304 ALFFIDLDKFKHINDSLGHSIGDRVLRVTAKRIKETIRQEDTLARLSGDEFTVIMEDLGH 363 Query: 774 VESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASK 833 E A +A +I+ + + + S GI+L + ++ AD A Y +K Sbjct: 364 PEDASVLAEKILLVL-QKPMYIDEYTLYISGSIGISLYPQDAMDTESLLKYADTAMYKAK 422 Query: 834 NGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLIS 893 GR Y P+ ER AM I++ +L + R + + + Sbjct: 423 ENGRNTFEFYAPEMTEYALERIAMKTSL-KEAIEKEELCVHYQPQIDARAEC--IIGVEA 479 Query: 894 LKLWSCE-GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGIS--ISLPLS 950 L W ++ + F D L +D+ V +Q + +S ++L +S Sbjct: 480 LVRWQHPTRGLLHPEAFISLAEDTGLIVDIDKWVMRTAMKQVSTWHQEGLVSDVLALNIS 539 Query: 951 VAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH----AESVQKLRLAGCRIVLS 1006 + L + ++ L++ P+ L L IP ++ + E +++L + G I + Sbjct: 540 IKQLEGHNFMEEIAACLDDFDFKPKWLELEIPEGQVMKNHTETIERLKELSVMGIGISID 599 Query: 1007 QVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVV 1066 G + LK + L +D + N D ++ I A L + IA V Sbjct: 600 DFGTGYSSLSLLKRLPINRLKIDKSFIEFIP-NEEDVAIVKAIIALANSLKLDVIAEGVE 658 Query: 1067 LPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 D L G I G + + + Sbjct: 659 TDDQKDFLVENGCTKIQGYYYSRPIASEQM 688 Score = 145 bits (367), Expect = 8e-33, Method: Composition-based stats. Identities = 50/260 (19%), Positives = 100/260 (38%), Gaps = 9/260 (3%) Query: 302 THFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRG--LTFQQLTWPEDLNKD 359 F A+ S + L + + + LGY ++EL T+++L +P D+ Sbjct: 15 ERFELALCGSKTSILDWDMVNHTLYISPSWKEMLGYREDELPNAESTWKKLAYPRDIVNV 74 Query: 360 LQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKR 419 ++ ++K I + R +++G +W L ++ G P+ + DI E K Sbjct: 75 MRSLKKHIREHRKVFENNHRLRHKDGHWIWVLGRARIIYDEAGNPIRMVGTHTDITEEKE 134 Query: 420 TEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECV 479 + Q + E + ++ I SW+K L+E + + Sbjct: 135 LQLKYSQQAQ----VLEQIHDAVILLDMDGFIRSWNKGSEILFEYRADEVIGKN--FSIL 188 Query: 480 LPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVL-NKEGEVERLLGINM 538 ++ A + L+ +K E + K G + +L N+ GE ++ + Sbjct: 189 FSDNITSAYEKWISELKENGEYKGEMFLQKKSGEPLYAVFSFSLLKNQNGETTEVVSLIH 248 Query: 539 DMTEVKQLNEALFQEKERLH 558 D+TE K+ L ++K L Sbjct: 249 DITEQKKAEAVLQEQKNILR 268 Score = 99.4 bits (247), Expect = 7e-19, Method: Composition-based stats. Identities = 33/242 (13%), Positives = 75/242 (30%), Gaps = 11/242 (4%) Query: 292 AERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLT 351 E K + + +E + L+ +G NK Y +E+ G F L Sbjct: 130 TEEKELQLKYSQQAQVLEQIHDAVILLDMDGFIRSWNKGSEILFEYRADEVIGKNFSILF 189 Query: 352 WPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQI 411 + + + +L Y E ++G+ ++A+ + SL+++ +G ++ I Sbjct: 190 SDNITSAYEKWISELKEN--GEYKGEMFLQKKSGEPLYAVFSFSLLKNQNGETTEVVSLI 247 Query: 412 EDINELKRTEQVNQQ-------LMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI 464 DI E K+ E V Q+ L + + + R + + + Sbjct: 248 HDITEQKKAEAVLQEQKNILRYQAHHDALTRLPNRVLFF--DRLEQSIRKTARSEKDFAL 305 Query: 465 PPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVL 524 ++ + + +V ++ + D I Sbjct: 306 FFIDLDKFKHINDSLGHSIGDRVLRVTAKRIKETIRQEDTLARLSGDEFTVIMEDLGHPE 365 Query: 525 NK 526 + Sbjct: 366 DA 367 >UniRef50_Q1ASD1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ASD1_RUBXD Length = 1101 Score = 806 bits (2083), Expect = 0.0, Method: Composition-based stats. Identities = 219/1002 (21%), Positives = 378/1002 (37%), Gaps = 48/1002 (4%) Query: 128 ALGSAIVPPLLGGVLVVLLTPGDDPLRAFLIWVLSESIGALALVPLGLLFKPHYLLRHRN 187 LGS + PL G V + P F L + L + L Y Sbjct: 97 LLGSVMGAPLRSGGQTVGVISVARPEGGFGERELQVLVECAELAAVALENARLYAEAREE 156 Query: 188 PRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIV--LLMWSAVRLPRMEAFLIFLTTVMM 245 + L + + P + + + R L Sbjct: 157 LAARRRAEEALRRSEARLRAVVAGSPVTMFALDPSGVFTLAEGRGLERMGLLPEEVVGRS 216 Query: 246 VSLMMAADPSLLATPRTYLMS-------------HMPWLPFLLI---LLPANIMTMVMYA 289 ++ DP L A R L L LL + + + Sbjct: 217 AFEVIGGDPRLAADLRRALAGECLASVAEFGEVVLELHLSPLLREGRVEGVIGVATDVTG 276 Query: 290 FRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQ 349 A + + ESE+ R + ++ EG++L+ + A L E G T + Sbjct: 277 RVAAERRLRESESELRAVFAAMTDAVLVLDREGRYLRVSSADPSLLYAPAEGRVGKTVHE 336 Query: 350 LTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIA 409 + E + + + + G T +E G W VS + + Sbjct: 337 VLPREQARLFMDAIRRALEG-GRTIGVEYELPT-GGRSRWFSARVSPMPGG-----RVVW 389 Query: 410 QIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIK 469 DI E + E+ ++ ER + +A G+ + I ++ E+ P Sbjct: 390 VARDITERREAERRLRESEERFRVLADAALEGLVI-SERGRILEVNRAYTEILGYEPEEV 448 Query: 470 PNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGE 529 V V+PE R+ A + I + P+++E KDG R + R G Sbjct: 449 VGAPVLG-RVVPEHREIARRRI--AAGYDRPYEVEA--VRKDGRRVHLEIRGRQATYRGR 503 Query: 530 VERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVC--IDMAMKITFMNPVAEKM 587 R+ + D+TE K+ L + +E+ ++ + V +D + +P EK+ Sbjct: 504 RVRITAM-RDVTERKRAERELREAQEQYRRLVEQLPAVVYIDRLDETSSNVYSSPQTEKI 562 Query: 588 SGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYS 647 G++ +E P + + D ++ A+ +E + L R G V S Sbjct: 563 FGYSPQEWASDPEMFPRVLHPADRESVLAAHARANARGEPLELEYRLIARDGRVVWVRDS 622 Query: 648 ITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTV 707 L +G+ ++ D+TE + + +L + A HD LT L NRA F +L L Sbjct: 623 SIVLRDAEGNPRWRQGLMVDITEQKNLEARLVHLAFHDPLTGLPNRALFMDRLEHALARA 682 Query: 708 NSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGL 767 + A++FIDLD FK VNDS GH AGD LL +A + R D +ARLGGDEF + Sbjct: 683 GRSGDVLAVLFIDLDNFKFVNDSLGHEAGDRLLALVARRLSGATRPGDTVARLGGDEFTV 742 Query: 768 LLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQAD 826 LL + A +A R+ + + F GR V AS GI++ + E+M AD Sbjct: 743 LLEGIADGGEAARVAGRVAEVLRE-PFRVAGRELFVSASVGISVSTAGSGSVEELMRGAD 801 Query: 827 IACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEA 886 +A Y +K G+ R V++ + +R + D + R + ++L + V R+ + Sbjct: 802 LAMYEAKREGKDRYRVFDFGMSRTAHDRLRLENDLR-RAVGRDELRLYYQPVV--RLGDG 858 Query: 887 RNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKG-IS 944 R + +L W I+ F + + + RRV +AA + ++ Sbjct: 859 RVVAFEALLRWEHPRRGILLPDRFVPLAEETGMIVGIGRRVLELACSRAAGWRRQEPSLA 918 Query: 945 ISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA----ESVQKLRLAG 1000 +S+ +S L V ++ L+ + L P L L + A +D ++Q+LR G Sbjct: 919 VSVNISARQLVRPDFVEEVGRILQRTGLEPEGLVLEVTESAAMDEPGEAARALQRLRERG 978 Query: 1001 CRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKT 1060 R+ L G + L+ +L +D + G+ +L+ + ++ LG + Sbjct: 979 VRLALDDFGTGYSSLSYLRRLPVCFLKIDRSFVEGLGGDSGSGVLVGGVIALSRELGFEP 1038 Query: 1061 IAGPVVLPLVMDTLSGIGVDLIYGEVIADAQP---LDLLVNS 1099 +A + P ++ L +G +L G A P LV S Sbjct: 1039 VAEGIETPGQLERLLELGCELGQGYYFASPMPEGAAGELVRS 1080 >UniRef50_Q478L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Proteobacteria RepID=Q478L4_DECAR Length = 1665 Score = 806 bits (2082), Expect = 0.0, Method: Composition-based stats. Identities = 141/697 (20%), Positives = 277/697 (39%), Gaps = 22/697 (3%) Query: 409 AQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHI 468 Q ++ ++L E ++ + I+ + I +++ + E + Sbjct: 837 GQFSQALHRLAAQEEARRLQENLSGLFDTLTDFIFILDQAGRILHYNRAVAEDLGYGQNT 896 Query: 469 KPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEG 528 + V PE+ + + + + S + I G + + +G Sbjct: 897 LKGKTI--AAVHPENLRQIAEEVTVDIISGRRYSCPLPILCASGEQIMVETRVVNGYWDG 954 Query: 529 EVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMS 588 + L+GI+ D++E E ++ D+ E ++ D I +N +++ Sbjct: 955 QPA-LIGISQDISERLMAEE----RQQLAASVFDNAHEGIMITDPKGNILEVNATFTELT 1009 Query: 589 GWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSI 648 G+++ EALG + + + E ++ ++ +SG + +I Sbjct: 1010 GYSRAEALGNTPDMLK--SGHHDPAFYEEMWQKIRDDGYWRGEIWNRKKSGEIFVEQLTI 1067 Query: 649 TPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVN 708 + + DG+ V + D+T ++ ++L + A DALT L NR ++++ Sbjct: 1068 SSVRNRDGALSNFVAIFSDITLLKQHQQRLEHLAHFDALTQLPNRMLLSDRMQLAKAQAE 1127 Query: 709 STHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLL 768 + + A+ ++DLD FK +ND GH+ GD LL E+A + + +R+ D +ARLGGDEF LL Sbjct: 1128 RSGKTLAVCYLDLDNFKPINDRYGHSVGDFLLIEVAQRLKTCVRAGDTVARLGGDEFVLL 1187 Query: 769 LPDCNV-ESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADI 827 + + + TR+ISA++ F + V AS G+TL + + ++ AD Sbjct: 1188 ITNLDDLNECDHAMTRVISALSQ-PFRVSAQFVTVSASIGVTLYPHDGSDSDTLLRHADQ 1246 Query: 828 ACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEAR 887 + YA+K GR R +++P+ R + + + + + + R E Sbjct: 1247 SMYAAKQEGRNRYHLFDPENDRRARLRRE-EIGQIREGLANGEFKLYYQPKVNMR--EGS 1303 Query: 888 NLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK--GIS 944 + +L W E ++ +F + L+ + V E +Q ++ +S Sbjct: 1304 FIGAEALIRWQHPERGLLLPDSFLPALEGSELAIDIGDWVIQEALKQIDAWHRTQGIDLS 1363 Query: 945 ISLPLSVAGLSSATLVNDLLEQLENSP-LPPRLLHLIIPAEAILDHAESVQKL----RLA 999 +S+ ++ L L E L P + P + L + A L+ ++ +L R Sbjct: 1364 VSINIAGIHLQHPGFSRRLGELLAAYPNVTPGQIELEVLETAALEDIQTTAELFAECRNL 1423 Query: 1000 GCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMK 1059 G L G + AD L +D N+ + D ++ + G + Sbjct: 1424 GVTFALDDFGTGYSSLTYFRRLPADMLKIDQSFIRNMLDDTDDLAIVEGVIGLTHAFKRQ 1483 Query: 1060 TIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 IA V L +G D+ G IA P + L Sbjct: 1484 VIAEGVETVEHGLVLLLLGCDMAQGFGIARPMPPEQL 1520 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 79/542 (14%), Positives = 166/542 (30%), Gaps = 79/542 (14%) Query: 231 PRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAF 290 P +A L + ++ +D +L + + L + L + A Sbjct: 210 PLADAAQQMLDHGIRHLTVVDSDGNLAGLLSEHTLMSPLKLGLIDDALIDR--QALARAR 267 Query: 291 RAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQL 350 A + +E + R ++ + L TE + L N+A+ + G + + G T ++L Sbjct: 268 EAMLDETARNERYQRALLDNFPFLVWLKDTESRLLTANRAMAKAAG--SDSVIGKTDREL 325 Query: 351 TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQ 410 PE + +++ N +E +G VW + V DGT L + Sbjct: 326 WPPELASAYRADDLAVMASRQNKIVVEPIIV--DGQTVWHETYKAPVIADDGTLLGTVGF 383 Query: 411 IEDINELKRTEQVNQQLMERITLAN----------------------EAGGIGIWEWELK 448 DI+E KR E+ Q + + I + + + + Sbjct: 384 ARDISERKRAEEAMQLRNQALAGLIAGEALPRVLELIALSVEAEIPGWHCSILLADKDGR 443 Query: 449 PNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRIT 508 + Y + + + + + P + +R Sbjct: 444 QLRLGAAPSLPPAYGLA---VDGMPIAPGVASSGAAAATRQRVVVDNINEHPNWVNYRDL 500 Query: 509 VKDGIRHIRALANRVLNKEGEVERLLGI--------NMD--------------MTEVKQL 546 G + V+ G++ + D + E + Sbjct: 501 ADHG-CFSACWSEPVIGTNGQLLGTFTAYYPSPTSPHEDYLGLLLQAAQLTALVIERQNS 559 Query: 547 NEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHI 606 ++ L + DSIGEA+ + +N AE+M G ++ +G +++ Sbjct: 560 SQDLERSLATFRGIFDSIGEALFIQGEDRRFLDVNTSAEQMFGLSRASLIGQTHESLIAP 619 Query: 607 TFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQ 666 D + + I +A + + + + + + ++ G + + Sbjct: 620 GMLDLEAIDQAISTALAGTPQ-AFETLARSSTERIFPIEVRLHT-ASYFGRPV-LIASAV 676 Query: 667 DVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTV-NSTHQRHALV-----FID 720 D++E + +L HD L L + AL+ F D Sbjct: 677 DISERKNAELRLE--VEHD--------------LAQALASGMQRDEVLGALLKAIQRFPD 720 Query: 721 LD 722 LD Sbjct: 721 LD 722 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 34/192 (17%), Positives = 71/192 (36%), Gaps = 3/192 (1%) Query: 287 MYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLT 346 + +ER E + + + + G+ + +G L+ N + GYS+ E G T Sbjct: 961 ISQDISERLMAEERQQLAASVFDNAHEGIMITDPKGNILEVNATFTELTGYSRAEALGNT 1020 Query: 347 FQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLY 406 L +++ + I + + E ++G++ L +S VR+ DG Sbjct: 1021 PDMLKSGHHDPAFYEEMWQKIRDD-GYWRGEIWNRKKSGEIFVEQLTISSVRNRDGALSN 1079 Query: 407 FIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPP 466 F+A DI LK+ +Q + L L + + + +R + + Sbjct: 1080 FVAIFSDITLLKQHQQRLEHLAHFDALTQLPNR--MLLSDRMQLAKAQAERSGKTLAVCY 1137 Query: 467 HIKPNWQVWYEC 478 N++ + Sbjct: 1138 LDLDNFKPINDR 1149 Score = 135 bits (341), Expect = 9e-30, Method: Composition-based stats. Identities = 74/475 (15%), Positives = 141/475 (29%), Gaps = 50/475 (10%) Query: 248 LMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNA 307 ++ L Y P +L +LL A +T ++ + + + S FR Sbjct: 514 VIGTNGQLLGTFTAYYPSPTSPHEDYLGLLLQAAQLTALVIERQNSSQDLERSLATFRGI 573 Query: 308 MEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPE--DLNKDLQQVEK 365 + + + G + ++L N + Q G S+ L G T + L P DL Q + Sbjct: 574 FDSIGEALFIQGEDRRFLDVNTSAEQMFGLSRASLIGQTHESLIAPGMLDLEAIDQAIST 633 Query: 366 LISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQ 425 ++G + E + + + + + G P+ IA DI+E K E + Sbjct: 634 ALAGTPQAF--ETLARSSTERIFPIEVRLHTASYF-GRPV-LIASAVDISERKNAELRLE 689 Query: 426 QLMERITLANEAGG----IGIWEW------ELKPNIFSW-----DKRMFELYEIPPH--- 467 + +G +L W R+ + Sbjct: 690 VEHDLAQALASGMQRDEVLGALLKAIQRFPDLDAGCVHWRQADGSYRLVAHQGVSLDFAE 749 Query: 468 -------------IKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIR 514 + N C P ++ + R + +K + Sbjct: 750 KVSHLDADSPLALLALNGGTICNCETPNKHCADASILDNQAMQREGLDCLAALPIKQESQ 809 Query: 515 HIRALANRVLNKEG-------EVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEA 567 + L G +E+L G E + +E L D++ + Sbjct: 810 PVACLTLGSRQASGVLPSTLLSLEKLSGQFSQALHRLAAQEEARRLQENLSGLFDTLTDF 869 Query: 568 VVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSA 627 + +D A +I N + G+ Q G + V + E + S Sbjct: 870 IFILDQAGRILHYNRAVAEDLGYGQNTLKGKTIAAVHPENLRQ---IAEEVTVDIISGRR 926 Query: 628 IEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSA 682 + + C SG V + DG + + QD++E + A Sbjct: 927 YSCPLPILCASGEQIMVETRVVNGY-WDGQPA-LIGISQDISERLMAEER-QQLA 978 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 55/279 (19%), Positives = 98/279 (35%), Gaps = 12/279 (4%) Query: 274 LLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQ 333 LL L + A ++ + + + + ++ G+ L N+A+ + Sbjct: 829 LLSLEKLSGQFSQALHRLAAQEEARRLQENLSGLFDTLTDFIFILDQAGRILHYNRAVAE 888 Query: 334 FLGYSQEELRGLTFQQLTWPEDLNKDLQQVE-KLISGEINTYSMEKRYYNRNGDVVWALL 392 LGY Q L+G T PE+L + ++V +ISG YS +G+ + Sbjct: 889 DLGYGQNTLKGKTIAA-VHPENLRQIAEEVTVDIISGRR--YSCPLPILCASGEQIMVET 945 Query: 393 AVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIF 452 V DG P I +DI+E E+ Q + GI + K NI Sbjct: 946 RVVNGYW-DGQPA-LIGISQDISERLMAEERQQLAA----SVFDNAHEGIMITDPKGNIL 999 Query: 453 SWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG 512 + EL D + + ++ ++ E K G Sbjct: 1000 EVNATFTELTGYSRAEALGNTPDMLKSGHHD-PAFYEEMWQKIRDDGYWRGEIWNRKKSG 1058 Query: 513 IRHIRA-LANRVLNKEGEVERLLGINMDMTEVKQLNEAL 550 + + V N++G + + I D+T +KQ + L Sbjct: 1059 EIFVEQLTISSVRNRDGALSNFVAIFSDITLLKQHQQRL 1097 >UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4D8_9PROT Length = 1138 Score = 804 bits (2077), Expect = 0.0, Method: Composition-based stats. Identities = 148/767 (19%), Positives = 294/767 (38%), Gaps = 59/767 (7%) Query: 355 DLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDI 414 L++ Q +E+ ++ + + N + + Sbjct: 392 HLDRVYQNLEQRVTERTQELEILNQQIRAN-----------------------LLISRES 428 Query: 415 NELKRTEQVNQQL---MERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPN 471 E + + + + + ++ I ++R ++ + Sbjct: 429 QEKLAASEAHSKRIAEELQYQKFALDEHAIVSVTDVTGTITDVNERFCQISQYSREELIG 488 Query: 472 --WQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLNKEG 528 ++ P + K + ++ + E KDG + + +++ G Sbjct: 489 KNHKMLNSGWHP---KGFFKAMYRAITRGQVWNDEVCNRAKDGSLYWLDMTVVPFMDECG 545 Query: 529 EVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMS 588 + + +GI D+TE K+ EA+ + + +LHI DS +AV+ +DM N A ++ Sbjct: 546 KPYKYIGIRTDITERKKSAEAIERSEAKLHILFDSNSDAVLMLDMQG-FFDCNKAALRLF 604 Query: 589 GW-TQEEALGVPLLTVLH---ITFGDNGPLMENIYSADTSRSAIEQDVVLHCRS-GGSYD 643 G T EE + D+ L + T + + + G S+ Sbjct: 605 GCATTEELCKHHPADMSPATQPNGIDSLTLANEYIATATRDGNAQFEWLHKRMDSGQSFP 664 Query: 644 VHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRIL 703 ++ + LDG + ++D+TE +K ++ A +D LT L NR +L+ Sbjct: 665 ADVLLSSMK-LDGRVV-LQATVRDITERKKSESEIVRLAFYDPLTGLPNRRLLMDRLQHA 722 Query: 704 LQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGD 763 L + + A++FIDLD FK++ND+ GHA GD LL E+A + +R D +ARLGGD Sbjct: 723 LTSNLRNDKHGAILFIDLDNFKSLNDTKGHAVGDLLLVEVAQRLKGCVREEDTVARLGGD 782 Query: 764 EFGLLLPDCNV------ESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQ 817 EF +LL + + + +A +I+ A+N ++ +G + S G+ L + Sbjct: 783 EFVVLLDNLSHGHDNAGAHTKRVAEKILQALN-LSYMLQGYEYHSSPSIGVALFCADASS 841 Query: 818 AAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHG 877 E++ +AD A Y SK GR V Y+ + A RA + +++ QLM+ Sbjct: 842 PDELLKRADSAMYQSKAAGRNTVRFYDERTQALLLARAELEHAL-HHALEQQQLMLYYQV 900 Query: 878 VASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAK 936 + + + + L W +I F + + + V + Q + Sbjct: 901 QVN---ADYQPVGAEVLLRWFHPVLGMISPAQFIPLAEESGMIIPIGYWVLEQACDQLKR 957 Query: 937 AVAS---KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAE-- 991 + + +++ +S+ A + + +S + P L L I ++ E Sbjct: 958 WASDVFKCDLVLAVNVSIRQFHEADFAQKVQALVTDSGISPDRLKLEITESMLVHDVENI 1017 Query: 992 --SVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITII 1049 ++Q+L+ G + G +S+K D L +D ++ + D+ ++ I Sbjct: 1018 IATMQQLKKIGLNFSMDDFGTGYSSLSSIKRLPLDQLKIDQSFVRDIGHDEHDKAIVRTI 1077 Query: 1050 QGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 AQ + + IA + L+ G G + + PL Sbjct: 1078 IAMAQSMKLNIIAEGIETEQQRRLLALKGCTNYQGYLFSKPVPLSDF 1124 Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats. Identities = 53/322 (16%), Positives = 113/322 (35%), Gaps = 23/322 (7%) Query: 277 LLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLG 336 LL + + A A K I+E + + A++ AI +++ G N+ CQ Sbjct: 422 LLISRESQEKLAASEAHSKRIAEELQYQKFALDEHAI-VSVTDVTGTITDVNERFCQISQ 480 Query: 337 YSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSL 396 YS+EEL G + L + + + I+ ++ E ++G + W + V Sbjct: 481 YSREELIGKNHKMLNSGWHPKGFFKAMYRAIT-RGQVWNDEVCNRAKDGSLYWLDMTVVP 539 Query: 397 VRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDK 456 G P +I DI E K++ + ++ ++ + ++ + +++ F +K Sbjct: 540 FMDECGKPYKYIGIRTDITERKKSAEAIERSEAKLHILFDSNSDAVLMLDMQ-GFFDCNK 598 Query: 457 RMFELYEIPPHIKPNWQVWYECVLP------EDRQHAEKVIRDSLQSRSPFKLEFRITVK 510 L+ + + + A + I + + + + E+ Sbjct: 599 AALRLFGCATTEELCKHHPADMSPATQPNGIDSLTLANEYIATATRDGNA-QFEWLHKRM 657 Query: 511 D-GIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQ-----------EKERLH 558 D G + + +G V L D+TE K+ + + + L Sbjct: 658 DSGQSFPADVLLSSMKLDGRVV-LQATVRDITERKKSESEIVRLAFYDPLTGLPNRRLLM 716 Query: 559 ITLDSIGEAVVCIDMAMKITFM 580 L + + D I F+ Sbjct: 717 DRLQHALTSNLRNDKHGAILFI 738 >UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9D8_9BURK Length = 897 Score = 803 bits (2076), Expect = 0.0, Method: Composition-based stats. Identities = 166/865 (19%), Positives = 311/865 (35%), Gaps = 82/865 (9%) Query: 304 FRNAMEYSAIGMALVGTEGQWLQTNKALCQ----FLGYSQEELRGLTFQQLTWPEDLNKD 359 +E + + + T+G + N+ Q LG S + E L Sbjct: 40 LIQLLEGVPVPLFVKDTQGHVIYVNRTWRQSMAPALGGSPAAAV----SDVLSAEQLASF 95 Query: 360 LQQ-VEKLISGEINTYSMEKRYYNRNGDV--VWALLAVSLVRHTDGTPLYFIAQIEDINE 416 Q+ +E +G T+ E + NG L + + DG P + DI E Sbjct: 96 HQRDLEAFSAGTTVTHEDEVKG---NGQQSARHTLTTLVPLFDADGQPSLIVGSTVDITE 152 Query: 417 LKRTEQVNQQLMERITLANEAGGIGIWEWELKPNI-----------FSWDKRMFELYEIP 465 ++ +Q N + + + E D+ L Sbjct: 153 QRQLQQQNAAERGLLEMLASDVPLQDIMSEFILRYEAIFTGVMGSVLLMDEEGKHLRHGA 212 Query: 466 PHIKP-------------------------NWQVWYECVLPEDRQHAEKVIRDSLQSRSP 500 P +V + + A K + S R+ Sbjct: 213 APNLPIEYCKAIDGGAIGPSAGSCGTAAFTGKEVLVSDIANDPLWAAYKELALSHGLRAC 272 Query: 501 FKLEFRITVKDGIRHI---RALANRVLNKEGEVER------LLGINMDMTEV--KQLNEA 549 + + R T I +A + E + R L I D+ + +Q +A Sbjct: 273 WSVPIRSTKGKVIGTFANYYGVARIPSDSELQSARRSAYLLSLAIENDLNDRQIRQDRQA 332 Query: 550 LFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFG 609 + + LDS+ + +V +D+ +I N A +M G E L +L Sbjct: 333 IEEAGLYRQAILDSMVDGLVTLDLNGRIHTFNNAACRMMGRDPEAPRPQTLSELLGTQLP 392 Query: 610 DNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVT 669 N ++ S +V +G + S + + + V+ ++D+T Sbjct: 393 LNVQGHLDLLSTVDGIEGASAEVNGRHANGAIRPISVSASRIPHTEHDT--FVVTLRDIT 450 Query: 670 ESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVND 729 + R+ ++ A +D LT L NR ++R + Q AL+F+DLD FK +ND Sbjct: 451 QQRQDEEEIRRLAFYDPLTGLPNRRLLMDRVRQAMVNSARLGQHGALMFLDLDHFKLLND 510 Query: 730 SAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCN------VESARFIATR 783 + GH GD LL+++A + + +R D +ARLGGDEF +LL + A +A + Sbjct: 511 TLGHDVGDELLQQVAYRLRNCVREGDSVARLGGDEFVVLLEGLSDNRTDAANQAEVVAHK 570 Query: 784 IISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVY 843 I+ A+ + G + S GI + +++ +++ +AD+A Y +K GR + Sbjct: 571 ILDALA-LPYSLRGHGYNSTPSIGIVVFMEDHETMDDLLKKADVAMYQAKAAGRNTARFF 629 Query: 844 EPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCE-GE 902 +P AA + A ++ + + ++ ++ ++ + R +L W+ Sbjct: 630 DPVMQAAVTTHAELAKEIRL-GLQRHEFVLHYQVQIDSQ---GRCTGAEALVRWNHRVRG 685 Query: 903 IIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASK---GISISLPLSVAGLSSATL 959 ++ F + + L V QQ + + ++++ +S + L+ Sbjct: 686 LVSPAHFIPLAEETGMILPLGEWVMESACQQLVEWSRNPMTAHWTLAVNVSASQLAQPEF 745 Query: 960 VNDLLEQLENSPLPPRLLHLIIPAEAILDHAE----SVQKLRLAGCRIVLSQVGRDLQIF 1015 V + E L+ S P L L + ++D E + ++ G L G Sbjct: 746 VASVREALQRSGAPAGQLKLELTESMLVDDVEDIIVKMMAIKELGVSFSLDDFGTGYSSL 805 Query: 1016 NSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLS 1075 + LK L +D +V + D ++ + LG+ IA V D L+ Sbjct: 806 SYLKRLPLSQLKIDQSFVRDVLTDPSDAVIARTVVALGHSLGLTVIAEGVETAEQRDALA 865 Query: 1076 GIGVDLIYGEVIADAQPLDLLVNSS 1100 + D G P D L+ S+ Sbjct: 866 AMQCDAFQGYYFGRPAPADALILSA 890 Score = 107 bits (268), Expect = 3e-21, Method: Composition-based stats. Identities = 42/325 (12%), Positives = 110/325 (33%), Gaps = 16/325 (4%) Query: 224 MWSAVRLPRMEAFLIFLTTVMM-------VSLMMAADPSLLATPRTYLMSHMPWLPFLLI 276 +W+A + + L +V + + + L S L + Sbjct: 256 LWAAYKELALSHGLRACWSVPIRSTKGKVIGTFANYYGVARIPSDSELQSARRSAYLLSL 315 Query: 277 LLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLG 336 + ++ R +R+ I E+ + + ++ G+ + G+ N A C+ +G Sbjct: 316 AIENDLND---RQIRQDRQAIEEAGLYRQAILDSMVDGLVTLDLNGRIHTFNNAACRMMG 372 Query: 337 YSQEELRGLTFQQLTWPEDLNKDLQQVEKLIS-GEINTYSMEKRYYNRNGDVVWALLAVS 395 E R T +L + ++ L + I S E + NG + ++ S Sbjct: 373 RDPEAPRPQTLSELLGTQLPLNVQGHLDLLSTVDGIEGASAEVNGRHANGAIRPISVSAS 432 Query: 396 LVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWD 455 + HT F+ + DI + ++ E+ ++L L + + Sbjct: 433 RIPHT--EHDTFVVTLRDITQQRQDEEEIRRLAFYDPLTGLPNRRLL--MDRVRQAMVNS 488 Query: 456 KRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSR-SPFKLEFRITVKDGIR 514 R+ + + ++++ + + + + + L++ R+ + + Sbjct: 489 ARLGQHGALMFLDLDHFKLLNDTLGHDVGDELLQQVAYRLRNCVREGDSVARLGGDEFVV 548 Query: 515 HIRALANRVLNKEGEVERLLGINMD 539 + L++ + + E + +D Sbjct: 549 LLEGLSDNRTDAANQAEVVAHKILD 573 Score = 55.8 bits (134), Expect = 9e-06, Method: Composition-based stats. Identities = 15/134 (11%), Positives = 46/134 (34%), Gaps = 3/134 (2%) Query: 429 ERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAE 488 + E + ++ + + ++ ++ + P + + E Sbjct: 38 HDLIQLLEGVPVPLFVKDTQGHVIYVNRTWRQSMA-PALGGSPAAAVSDVLSAEQLASFH 96 Query: 489 KVIRDSLQSRSPFKLEFRITVKDGI--RHIRALANRVLNKEGEVERLLGINMDMTEVKQL 546 + ++ + + E + RH + + +G+ ++G +D+TE +QL Sbjct: 97 QRDLEAFSAGTTVTHEDEVKGNGQQSARHTLTTLVPLFDADGQPSLIVGSTVDITEQRQL 156 Query: 547 NEALFQEKERLHIT 560 + E+ L + Sbjct: 157 QQQNAAERGLLEML 170 >UniRef50_Q2W5V0 Predicted signal transduction protein containing a membrane domain n=3 Tax=Magnetospirillum RepID=Q2W5V0_MAGSA Length = 820 Score = 803 bits (2076), Expect = 0.0, Method: Composition-based stats. Identities = 163/803 (20%), Positives = 304/803 (37%), Gaps = 30/803 (3%) Query: 303 HFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTW-PEDLNKDLQ 361 + + V G+++ + GYS EEL G+ L PED + Sbjct: 30 LHAALLRDLPDVLYSVDAAGRFIWVSPNAATVFGYSAEELVGMEAAALYAKPEDR---VG 86 Query: 362 QVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTE 421 V ++ E ++G +WA + + +G I DI E+ +T Sbjct: 87 TVRRIRDAGGRAVRSEVEMRRKDGISIWAAIYACALMDGEGRITGINGAIRDITEIWQTR 146 Query: 422 QVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLP 481 + +R ++ I + I +K L+ W + + P Sbjct: 147 KTLGDSEDRFRRLSDVATEAICI-HFQGKIIDMNKAFETLFAYSRDELLTMWAW-DVIDP 204 Query: 482 EDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMT 541 D A+ ++ Q +P+ E R KDG + ++ G+ R+ I D+T Sbjct: 205 RDISLAKSMVAQ--QYEAPY--EVRGIRKDGSVFPMEIHSKHSRMGGDSVRVTSI-RDLT 259 Query: 542 EVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLL 601 + K+ L ++ AV + + ++N ++G + +G PL Sbjct: 260 QSKKAEA----SVRLLSQAVEQSPVAVAVVGGDGMVQYVNSAHASLTGHSSSAVVGKPLS 315 Query: 602 TVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGS 661 + G ++ + + + ++ ++ ++ + G + ++T Sbjct: 316 ALYPGK---AGAMLGDFWRTLLGQGELQGELQVNRQDGTWQWQQVHGSKVATPGEEGTHY 372 Query: 662 VLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDL 721 +L I+DVT + R+L + A D LT L NR +L + ++ L+F+DL Sbjct: 373 LLQIEDVTLRKDQERRLQHQALFDGLTDLPNRVHALDRLAREIDMARDHGRKVGLLFVDL 432 Query: 722 DRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARFI 780 D FKA+NDS GH GD LL A + V+AR GGDEF +++ D + +A + Sbjct: 433 DGFKAINDSLGHEYGDELLVLAAERLRQAAGDGGVVARFGGDEFLVIMGDMEDGAAAGEV 492 Query: 781 ATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRV 840 A I+ + F R AS G+ L ++ ++ ADIA Y +K GR R Sbjct: 493 AAAIVDRFSQ-PFTISRRDLISTASIGLALYPEDGRTQQTLLRNADIAMYQAKLAGRNRF 551 Query: 841 TVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SC 899 + + R M + + R + +Q ++ + + R + + +L W + Sbjct: 552 CFFTSRMNEEAEARLRMEGELR-RAVGTDQFHLVYQPLVAV--ATGRAVGVEALLRWSNP 608 Query: 900 EGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAV--ASKGISISLPLSVAGLSSA 957 E + F + A+ R V + A + V + + + +S A Sbjct: 609 ELGNVPPDRFIPQAETCGVIVAIGRMVLETACRDARRWVEDGHADLRLCINVSPRQFQDA 668 Query: 958 TLVNDLLEQLENSPLPPRLLHLIIPAEAIL---DHAES-VQKLRLAGCRIVLSQVGRDLQ 1013 + D+ L S L P L L I +L ++ ++ L G ++ + G Sbjct: 669 GFLGDVRAALAGSGLSPANLELEITEGLLLTERGDVDTLLRTLTDMGVKLSIDDFGTGYS 728 Query: 1014 IFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDT 1073 + L+ D L +D + ++L+ I A LG++ IA V M Sbjct: 729 SLSYLERFPFDTLKIDRSFMIGMLERQERKVLVETIVAMASGLGLEVIAEGVETAEQMAH 788 Query: 1074 LSGIGVDLIYGEVIADAQPLDLL 1096 L+ I D+ G + + P + Sbjct: 789 LAAINCDIAQGYLFSRPVPAGDI 811 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 88/258 (34%), Gaps = 14/258 (5%) Query: 428 MERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHA 487 ++ + ++ + PEDR Sbjct: 28 AGLHAALLRDLPDVLYSVDAAGRFIWVSPNAATVFGYSAEELVGMEAAALYAKPEDRVGT 87 Query: 488 EKVIRDSLQSRSPFKLEFRITVKDGI-RHIRALANRVLNKEGEVERLLGINMDMTEVKQL 546 + IRD+ + E + KDGI A +++ EG + + G D+TE+ Q Sbjct: 88 VRRIRDA--GGRAVRSEVEMRRKDGISIWAAIYACALMDGEGRITGINGAIRDITEIWQT 145 Query: 547 NEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHI 606 + L ++R D EA+ KI MN E + ++++E L + + Sbjct: 146 RKTLGDSEDRFRRLSDVATEAICI-HFQGKIIDMNKAFETLFAYSRDELL---TMWAWDV 201 Query: 607 TFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQ 666 + L +++ + +V + G + + + G + V I+ Sbjct: 202 IDPRDISLAKSMVAQQYEAPY---EVRGIRKDGSVFPMEIHSK--HSRMGGDSVRVTSIR 256 Query: 667 DVTESRKMLR--QLSYSA 682 D+T+S+K +L A Sbjct: 257 DLTQSKKAEASVRLLSQA 274 Score = 122 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 42/275 (15%), Positives = 87/275 (31%), Gaps = 15/275 (5%) Query: 280 ANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQ 339 N + RK + +SE FR + + + + +G+ + NKA YS+ Sbjct: 132 INGAIRDITEIWQTRKTLGDSEDRFRRLSDVATEAICIH-FQGKIIDMNKAFETLFAYSR 190 Query: 340 EELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRH 399 +EL + + P D++ V + E R ++G V + R Sbjct: 191 DELLTMWAWDVIDPRDISLAKSMVAQQYEAP-----YEVRGIRKDGSVFPMEIHSKHSRM 245 Query: 400 TDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMF 459 + + I D+ + K+ E + ++ A E + + + + Sbjct: 246 GGDSVR--VTSIRDLTQSKKAEASVR----LLSQAVEQSPVAVAVVGGDGMVQYVNSAHA 299 Query: 460 ELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIR-HIRA 518 L + + P +L + + E ++ +DG + Sbjct: 300 SLTGHSSSAVVGKPL--SALYPGKAGAMLGDFWRTLLGQGELQGELQVNRQDGTWQWQQV 357 Query: 519 LANRVLNKEGEVERLLGINMDMTEVKQLNEALFQE 553 ++V E L D+T K L + Sbjct: 358 HGSKVATPGEEGTHYLLQIEDVTLRKDQERRLQHQ 392 Score = 98.2 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 47/369 (12%), Positives = 103/369 (27%), Gaps = 20/369 (5%) Query: 278 LPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGY 337 + + + + + K S A+E S + +A+VG +G N A G+ Sbjct: 245 MGGDSVRVTSIRDLTQSKKAEASVRLLSQAVEQSPVAVAVVGGDGMVQYVNSAHASLTGH 304 Query: 338 SQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLV 397 S + G L + L + + G+ E + ++G W + S V Sbjct: 305 SSSAVVGKPLSALYPGK-AGAMLGDFWRTLLGQGE-LQGELQVNRQDGTWQWQQVHGSKV 362 Query: 398 RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKR 457 +++ QIED+ K E+ Q L + + + + Sbjct: 363 ATPGEEGTHYLLQIEDVTLRKDQERRLQHQALFDGLTDLPNR--VHALDRLAREIDMARD 420 Query: 458 MFELYEIPPHIKPNWQVWYECVLPED--------RQHAEKVIRDSLQSRSPFKLEFRITV 509 + ++ + + E + + D EF + + Sbjct: 421 HGRKVGLLFVDLDGFKAINDSLGHEYGDELLVLAAERLRQAAGDGGVVARFGGDEFLVIM 480 Query: 510 KDGIRHIRALANRVLNKEGEVERLLGINMD-MTEVKQLNEALFQEKERLHITLDSIGEAV 568 D A + + D ++ ++ L + A+ Sbjct: 481 GDMEDGAAAGEVAAAIVDRFSQPFTISRRDLISTASIGLALYPEDGRTQQTLLRNADIAM 540 Query: 569 VCIDMAMKITFMNPVAEKMSGW--TQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRS 626 +A + + + EA + D L+ A + Sbjct: 541 YQAKLAGR-----NRFCFFTSRMNEEAEARLRMEGELRRAVGTDQFHLVYQPLVAVATGR 595 Query: 627 AIEQDVVLH 635 A+ + +L Sbjct: 596 AVGVEALLR 604 >UniRef50_Q21SH7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q21SH7_RHOFD Length = 658 Score = 803 bits (2076), Expect = 0.0, Method: Composition-based stats. Identities = 142/674 (21%), Positives = 258/674 (38%), Gaps = 39/674 (5%) Query: 431 ITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKV 490 L GI + + + ++ L+ E + K Sbjct: 8 FQLILTTISDGIVVVDQRGVVLYANESAERLF-------------------ERGELVGKD 48 Query: 491 IRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEAL 550 + + S + + + GI + + + + D+TE K + L Sbjct: 49 LAVPIHSGETRQ-DINLIRPSGIGWAELRSAPITWDKQ--PAFVICVRDITERKTSDLGL 105 Query: 551 FQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGD 610 DS E ++ D A +I +NP +++G++ + L + + Sbjct: 106 H----LADTVFDSTREGLMVTDSAQRIVRINPAFSEITGYSAADVLDQTPALLR--SGRH 159 Query: 611 NGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTE 670 + ++ + + +V ++ Y SI + G V V+ D+++ Sbjct: 160 DSAFYAAMWDSINVSGHWQGEVWNRRKNSEIYPQLISIDVIRDHTGRVCNYVAVLTDLSK 219 Query: 671 SRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDS 730 R +L + A HD LT L NR +L+ ++ AL+ +DLDRFK +NDS Sbjct: 220 LRSSQLELDFLAHHDPLTRLPNRLLLLSRLQHGIELAQRDGTHLALLMLDLDRFKDINDS 279 Query: 731 AGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDC-NVESARFIATRIISAVN 789 GH GD LL+ +A+ ++ +R+ D + R GGDEF +L+ D E A +A II ++ Sbjct: 280 FGHLVGDELLQLVATRLVKQVRTIDTVGRFGGDEFSVLMEDVAGAEQAARVANDIIRVLS 339 Query: 790 DYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAA 849 + + + G R+GAS GI++ DN ++ QAD A Y +K GRGR + Sbjct: 340 EPYGLSSGVEVRIGASVGISIYPDNGLTPELMLQQADSALYQAKIEGRGRFAYFSESLTQ 399 Query: 850 AHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCE-GEIIDEQT 908 A R + + R I + +L + IP R + +L W C ++ Sbjct: 400 AARARIDIEV-RLRRAITQGELRVYYQPQVD--IPSGRIVGAEALVRWQCPIEGLVPPAR 456 Query: 909 FRRSFSDPALSHALDRRVFHEFFQQAAKAV--ASKGISISLPLSVAGLSSATLVNDLLEQ 966 F L +D V E QQ + +++++ LS + + + Sbjct: 457 FITIAEATGLIGEIDDWVLRETCQQGQRWRAAGLPTLTLAVNLSAYQFLQGDISQTVAQV 516 Query: 967 LENSPLPPRLLHLIIPAEAIL----DHAESVQKLRLAGCRIVLSQVGRDLQIFNSLKANM 1022 L ++ P L L + A++ + + +L+ G R+ + G LK Sbjct: 517 LRDTGYPAAFLELELTESALMQREAQAIQMLDRLKALGVRLAIDDFGTGYSSLAYLKLFP 576 Query: 1023 ADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLI 1082 D L +D ++ + D ++T I A L +K +A V + L G D Sbjct: 577 LDVLKIDKRFIDDIPAHRDDMEIVTAIIAMAHSLRLKVLAEGVENKEQLAYLQTQGCDQF 636 Query: 1083 YGEVIADAQPLDLL 1096 G + + P Sbjct: 637 QGYLTSRPVPAAEF 650 Score = 115 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 19/159 (11%), Positives = 57/159 (35%), Gaps = 5/159 (3%) Query: 285 MVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRG 344 + + + ++ + + G+ + + + ++ N A + GYS ++ Sbjct: 93 RDITERKTSDLGLHLAD----TVFDSTREGLMVTDSAQRIVRINPAFSEITGYSAADVLD 148 Query: 345 LTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTP 404 T L + + I + E +N ++ L+++ ++R G Sbjct: 149 QTPALLRSGRHDSAFYAAMWDSI-NVSGHWQGEVWNRRKNSEIYPQLISIDVIRDHTGRV 207 Query: 405 LYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIW 443 ++A + D+++L+ ++ L L + + Sbjct: 208 CNYVAVLTDLSKLRSSQLELDFLAHHDPLTRLPNRLLLL 246 Score = 102 bits (255), Expect = 8e-20, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 101/321 (31%), Gaps = 53/321 (16%) Query: 297 ISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDL 356 ++E+ +F+ + + G+ +V G L N++ + + EL G L P Sbjct: 1 MTENLINFQLILTTISDGIVVVDQRGVVLYANESAERLF--ERGELVGK---DLAVPIHS 55 Query: 357 NKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINE 416 + Q + +G + WA L + + D P + I DI E Sbjct: 56 GETRQDIN---------------LIRPSG-IGWAELRSAPITW-DKQPAFVICV-RDITE 97 Query: 417 LKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWY 476 K ++ ++ G+ + I + E+ + Sbjct: 98 RKTSDLGL----HLADTVFDSTREGLMVTDSAQRIVRINPAFSEITGYSAADVLDQTPAL 153 Query: 477 ECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALAN-RVLNKEGEVERLLG 535 D + DS+ ++ E K+ + + ++ + + G V + Sbjct: 154 LRSGRHD-SAFYAAMWDSINVSGHWQGEVWNRRKNSEIYPQLISIDVIRDHTGRVCNYVA 212 Query: 536 INMDMTEVKQLNEALF---------------QEKERLHITLD-----SIGEAVVCIDMAM 575 + D+++++ L RL ++ A++ +D+ Sbjct: 213 VLTDLSKLRSSQLELDFLAHHDPLTRLPNRLLLLSRLQHGIELAQRDGTHLALLMLDLD- 271 Query: 576 KITFMNPVAEKMSGWTQEEAL 596 + +N + G +E L Sbjct: 272 RFKDINDSFGHLVG---DELL 289 >UniRef50_C5T198 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T198_ACIDE Length = 948 Score = 803 bits (2076), Expect = 0.0, Method: Composition-based stats. Identities = 137/715 (19%), Positives = 288/715 (40%), Gaps = 24/715 (3%) Query: 403 TPLYFIAQIEDINE--LKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFE 460 L ++ I + ++ + + + + +A ++E R+ Sbjct: 243 KLLGYLFLYRSIIQGTIEAPYRALARSEKSLKAVLDAVPDLMFEMTRSGRYLRVHTRVPG 302 Query: 461 LYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA 520 L E P + E + P+ + + + +F + + DG Sbjct: 303 LTERVPEQIAG-RTIDEVLPPDAAGVVRTALTQAEATGHTQGQQFALEMTDGRHWFELSV 361 Query: 521 NRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFM 580 R+ + R + ++ D+T+ Q +AL +L ++ +++ ++ +I ++ Sbjct: 362 ARIQDPGFADPRFVVLSRDVTQRMQDLDAL----RKLRHAVEQTPHSIIITNLRGQIEYV 417 Query: 581 NPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGG 640 NP ++G+ +E +G + + ++ ++ S A + +++ ++G Sbjct: 418 NPSFTTVTGYGSDEVMGRNPRML--GAGKTSAEVVAQMWERLLSGLAWKGELLNRHKTGR 475 Query: 641 SYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQL 700 + SI+P+ G+ + V +D++E + ++ + A+ DALT L NRA F + Sbjct: 476 EVWEYVSISPMRDEQGAITHYISVQEDISERKSNEERIRHLANFDALTGLPNRAMFSARF 535 Query: 701 RILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARL 760 L + AL+++DLDRFK VNDS G+A GD +L ++A + ++LR D ++R Sbjct: 536 SQALGLSQRSEGSLALLYLDLDRFKNVNDSLGYAVGDGVLIDVAHRLKALLRDEDTVSRY 595 Query: 761 GGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAE 820 GGDEF ++LP + A A R+ ++ E V S GI + + Sbjct: 596 GGDEFLVVLPLTTAQGAVHFAERLHGELSKA-CQVESHALLVTFSVGIAMYPGDGSDMEA 654 Query: 821 VMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVAS 880 + A++A Y +K GR + A S + + I + ++ + Sbjct: 655 LTHHAEVAMYKAKEMGRDHYCFFSADMQAQSSRLLRIENGLRT-AIAQGEMSLHFQPQ-- 711 Query: 881 PRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVA 939 R+ + R + + +L W E ++ F + V + Sbjct: 712 WRVHDRRMVGVEALLRWTHPELGVVGPAEFIPVAESSGQIIDIGLWVLDTALACLRRWRD 771 Query: 940 SK--GISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----V 993 + +++++ LS+A LV + + L+ + +P +L L + + E V Sbjct: 772 AGHTDLTVAVNLSLAQFRHPDLVEVVQKALQRAGVPAEVLELELTESIAMHEPEKAIACV 831 Query: 994 QKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHA 1053 + L G ++ L G F+ L+ L +D N+ ++ I + Sbjct: 832 RALADLGVQLSLDDFGTGYSSFSYLQRLRVHRLKIDQSFVRNLDT-ARGMSIVRAIVEMS 890 Query: 1054 QRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQP---LDLLVNSSYFAIN 1105 + LG+ TIA V P ++ L+G+ D++ G ++ P L+ L+ A + Sbjct: 891 RSLGLATIAEGVETPHQLEALAGLSCDMVQGYHLSRPLPVPALEALLEQRALASD 945 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 67/506 (13%), Positives = 150/506 (29%), Gaps = 39/506 (7%) Query: 20 VSLGLVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRHAGRMWPGIALSCSLGNIAA 79 VS G+ ++ + L+ + P P + M R + + + + Sbjct: 100 VSKGIWFWLPARYVAVLTLLLAVVLPWTVPDTTEMGLALRLRPVAFMLLLVGAIHAAVLY 159 Query: 80 SILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQNLADWLRLAL--GSAIVPPL 137 + + + T T V A G ++L +L + L+ + A V + Sbjct: 160 YPWILPETFVPATGLTGFKVGAEYGLIVLH-VLVFGLLLRQMRQPTTFNAPPLLAAVGTM 218 Query: 138 LGGVLVVLLTPGDDPLRAFLIWVLSESIGALALVPLGLLFKPHYLLRHRNPRLLFESLLT 197 G L L + + +G L L + R + Sbjct: 219 GLGEFFFTLYVDAADHFNLLGHIY-KLLGYLFLYRSIIQGTIEAPYRALARSEKSLKAVL 277 Query: 198 LAITLTLS--------WLSMLYLPWPFTFI---IVLLMWSAVRLPRMEAFLIFLTTVMMV 246 A+ + +P + I V P + T Sbjct: 278 DAVPDLMFEMTRSGRYLRVHTRVPGLTERVPEQIAGRTIDEVLPPDAAGVVRTALTQAEA 337 Query: 247 SLMMAADPSLLATPRTYLMSHMPWLPFLLILLP----ANIMTMVMYAFRAERKHISESET 302 + L W + + A+ +V+ +R ++ Sbjct: 338 TGHTQGQQFALEMTD-----GRHWFELSVARIQDPGFADPRFVVLSRDVTQRMQDLDALR 392 Query: 303 HFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQ 362 R+A+E + + + GQ N + GY +E+ G + L + + + Q Sbjct: 393 KLRHAVEQTPHSIIITNLRGQIEYVNPSFTTVTGYGSDEVMGRNPRMLGAGKTSAEVVAQ 452 Query: 363 VEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQ 422 + + + + E ++ G VW +++S +R G ++I+ EDI+E K E+ Sbjct: 453 MWERLLS-GLAWKGELLNRHKTGREVWEYVSISPMRDEQGAITHYISVQEDISERKSNEE 511 Query: 423 VNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPE 482 + L L + R + + + + + Y + + Sbjct: 512 RIRHLANFDALTGLPNRAM------------FSARFSQALGLSQRSEGSLALLYLDL--D 557 Query: 483 DRQHAEKVIRDSLQSRSPFKLEFRIT 508 ++ + ++ + R+ Sbjct: 558 RFKNVNDSLGYAVGDGVLIDVAHRLK 583 >UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W545_9CYAN Length = 709 Score = 803 bits (2075), Expect = 0.0, Method: Composition-based stats. Identities = 151/700 (21%), Positives = 277/700 (39%), Gaps = 28/700 (4%) Query: 413 DINELKRTEQVNQQLMERITLANEAGGIGIWEWELK-PNIFSWDKRMFELYEIP-PHIKP 470 +I + E +Q+ + I + +W + + ++ + + Sbjct: 2 NITQDNGIEPKSQKRHQLIPAILNSLDEVVWSASAQTYKLLYINQAAETILGRTLCELYD 61 Query: 471 NWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANRVLNKEGE 529 +W + P+DRQ ++ + +S + +E+RI DG +R I + ++ G Sbjct: 62 QPTLWELMIHPDDRQRVQQQFQSLGESGN-QAVEYRIVRPDGEVRWIHNRVCAIADETGT 120 Query: 530 VERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSG 589 V R+ GI D+T+ KQ L E + L + + A+ +D I F N ++++ G Sbjct: 121 VIRIDGIARDITQRKQAEVQLCPENDLLQGIMQTSIAAITVVDTQGNIIFANARSQQVLG 180 Query: 590 WTQEEALGVP-------LLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSY 642 TQ E + + F + + + T + + + G Sbjct: 181 LTQSELVERRYNCPTWQITDFQGGPFPEEQLPFQQV--MVTGQPVFDVQHAIEWADGTRK 238 Query: 643 DVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRI 702 + + PL DG V + D++ + + QL + A HD LT L NR F +++ Sbjct: 239 YLSVNGAPLKDADGVITHIVFSVTDISHHKHVEEQLCHDALHDNLTRLPNRTLFMERVNH 298 Query: 703 LLQTVNSTH-QRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLG 761 ++ A++F+DLDRFK VNDS GH GD LL A + +R++D +A L Sbjct: 299 AIKLAKRNQDYLFAVLFLDLDRFKVVNDSLGHDVGDQLLTATARQLEKCVRTTDTVAHLS 358 Query: 762 GDEFGLLLPDC-NVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAE 820 GDEF +LL D +++ A +A RI + + F AS GI L ++ + Sbjct: 359 GDEFTILLEDIKDIKDATRVAERIQATL-KAPFNLNNHEVFTSASIGIALSSTGYERSED 417 Query: 821 VMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVAS 880 ++ ADIA Y +K G+ R +++ A E + D + R ++ + + + S Sbjct: 418 ILRDADIAMYRAKELGKARHEIFDKIMHARALELLRLENDLR-RALERQEFEVYYQPITS 476 Query: 881 PRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVA 939 + +L W E ++ F D L L V HE +Q Sbjct: 477 --LVTGMLTGFEALVRWRHPELGLVSPAEFIPVAEDTGLIIPLGEWVLHEACRQLRMWHT 534 Query: 940 S----KGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQ- 994 + + +S+ LS + L+ + L + L L L I ++++AE+V Sbjct: 535 QFPTPEPLKMSVNLSGKQIKEPDLIEQIDHILAETGLDGSFLKLEITESILMENAETVTK 594 Query: 995 ---KLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQG 1051 +LR ++ + G + L + L +D + + + +I I Sbjct: 595 MLLQLRARNIQLSVDDFGTGYSSLSYLHRFPVNTLKIDRSFVSKMNPKNRNTEIIRTIIT 654 Query: 1052 HAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQ 1091 A L M IA V + L + + G + + Sbjct: 655 LAHSLRMDVIAEGVETLEQLTELKLLNCEQGQGYLFSKPL 694 Score = 150 bits (379), Expect = 4e-34, Method: Composition-based stats. Identities = 44/269 (16%), Positives = 98/269 (36%), Gaps = 21/269 (7%) Query: 299 ESETHFR---NAMEYSAIGMALVGTEG-QWLQTNKALCQFLGYSQEELRGLT--FQQLTW 352 +S+ + + + + + L N+A LG + EL ++ + Sbjct: 12 KSQKRHQLIPAILNSLDEVVWSASAQTYKLLYINQAAETILGRTLCELYDQPTLWELMIH 71 Query: 353 PEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIE 412 P+D + QQ + L GE ++E R +G+V W V + GT + Sbjct: 72 PDDRQRVQQQFQSL--GESGNQAVEYRIVRPDGEVRWIHNRVCAIADETGTVIRIDGIAR 129 Query: 413 DINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNW 472 DI + K+ E + + + I + + NI + R ++ + Sbjct: 130 DITQRKQAEVQLCPENDLLQGIMQTSIAAITVVDTQGNIIFANARSQQVLGLTQSELVER 189 Query: 473 Q---------VWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIR-HIRALANR 522 + + PE++ ++V+ + + F ++ I DG R ++ Sbjct: 190 RYNCPTWQITDFQGGPFPEEQLPFQQVM---VTGQPVFDVQHAIEWADGTRKYLSVNGAP 246 Query: 523 VLNKEGEVERLLGINMDMTEVKQLNEALF 551 + + +G + ++ D++ K + E L Sbjct: 247 LKDADGVITHIVFSVTDISHHKHVEEQLC 275 Score = 99.8 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 37/325 (11%), Positives = 98/325 (30%), Gaps = 34/325 (10%) Query: 276 ILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFL 335 ++ + + + + + + M+ S + +V T+G + N Q L Sbjct: 120 TVIRIDGIARDITQRKQAEVQLCPENDLLQGIMQTSIAAITVVDTQGNIIFANARSQQVL 179 Query: 336 GYSQEELRGLTF----QQLTW--PEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVW 389 G +Q EL + Q+T ++ ++++ + ++ +G + Sbjct: 180 GLTQSELVERRYNCPTWQITDFQGGPFPEEQLPFQQVMVTGQPVFDVQHAIEWADGTRKY 239 Query: 390 ALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKP 449 + + ++ DG + + + DI+ K E+ L ++ + Sbjct: 240 LSVNGAPLKDADGVITHIVFSVTDISHHKHVEEQLCHDALHDNLTRLPNRT-LFMERVNH 298 Query: 450 NIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITV 509 I + L+ + ++V + + + +LE + Sbjct: 299 AIKLAKRNQDYLFAVLFLDLDRFKVVNDSLGHDVGDQLLTATAR--------QLEKCVRT 350 Query: 510 KDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVV 569 D + H+ +L ++ + + + E Q H S + Sbjct: 351 TDTVAHLSGDEFTILLED---IKDIKDATRVAERIQATLKAPFNLNN-HEVFTSASIGI- 405 Query: 570 CIDMAMKITFMNPVAEKMSGWTQEE 594 A +G+ + E Sbjct: 406 --------------ALSSTGYERSE 416 >UniRef50_Q72EZ6 Sensory box/GGDEF domain/EAL domain protein n=3 Tax=Desulfovibrio vulgaris RepID=Q72EZ6_DESVH Length = 1072 Score = 803 bits (2075), Expect = 0.0, Method: Composition-based stats. Identities = 168/841 (19%), Positives = 305/841 (36%), Gaps = 59/841 (7%) Query: 304 FRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQV 363 ++ ++ +AL EG+ NKA L RG +L PE + L Sbjct: 241 WQILLDEMPGLLALTDFEGRVQLLNKAGHTLLRLPDGIARGRHRAELL-PERIAALLAAD 299 Query: 364 EKLISGEINTYSMEKRYYN--RNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTE 421 + + E +E +G L+ VR G +I+ LK TE Sbjct: 300 NERMQREGTPSQLEVTLPRYGHDGSDRTFLVQRFPVRDHSGGMQGVGTVAMEISALKNTE 359 Query: 422 -------------------------QVNQQLMERITLANEAGGIGIWEWELKPNIFSWDK 456 + + R + G+ + ++ Sbjct: 360 AGLRQRLTNIEAMVATRTEELRVANEALHRSSTRFRALFDYAPDGLLLQRDDGTLLDCNR 419 Query: 457 RMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHI 516 + H + D + +P + + G+ Sbjct: 420 MAEATLGLSRHELLALK-------ARDICREGHALPVPESEDTPLRTRTELLR-GGVAFP 471 Query: 517 RALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMK 576 ++ R L+ EGE L+ + D++ L + + E ++ D + Sbjct: 472 AEVSVRSLDIEGERTLLVAL-RDISSRIHTEHRLN----LFELVFRNALEGILITDASGA 526 Query: 577 ITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHC 636 I +NP ++GW + +A+G + + + E ++ + R A E ++ Sbjct: 527 ILAVNPAFTTITGWNERDAVGRNPRILK--SNRHDRGFYERLWHSLHERGAWEGEIWNRR 584 Query: 637 RSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASF 696 +G +Y SI+ + G+ V + D+++ + Q+ Y HDALT L NRA Sbjct: 585 INGENYPEWLSISAIRDESGATTNYVALFHDISDLKAKEAQIRYQGMHDALTGLPNRALL 644 Query: 697 EKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDV 756 ++L L+ T + L++ID+D FK +NDS GH AGD + E+A + ++R D Sbjct: 645 LERLAGELKEGQGTGRLCGLLYIDIDNFKTINDSLGHEAGDKFIAEVAEHLTLLIRPEDT 704 Query: 757 LARLGGDEFGLLLPDCNVE-SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNN 815 L+RLGGDE+ +L+ + E +A RI+ + + + R VG S GI + + Sbjct: 705 LSRLGGDEYVILVANPGEEREVVLVAERILHHFSQPIALLD-RELHVGLSIGIAIHPADG 763 Query: 816 HQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLA 875 E+++ AD+A Y +K G+ + P R + ++ +++ Sbjct: 764 KGPDELLTNADLAMYRAKAQGKNTYERFSPHLHDRIRSRMELE-GRLRHALRHGEIVPHF 822 Query: 876 HGVASPRIPEARNLWLISLKLWS-CEGEIIDEQTFRRSFSDPALSHALDRRVFHE--FFQ 932 + R + +L W+ +G I F D L L + F Sbjct: 823 QPRVD--LATGRIVGAEALARWTLPDGTRISPGEFIPVAEDLGLIFDLGEHMLRSSLAFT 880 Query: 933 QAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHA-- 990 +A I++++ LS+ A LV +L L ++ +PP L L I AI+ Sbjct: 881 RALMDEGLPDITMAVNLSLVQCRHADLVGRVLAALRDTGVPPERLELEITESAIMSDVTR 940 Query: 991 --ESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITI 1048 + +L G + + G LK L +D ++ + Sbjct: 941 TLRRLDRLAALGITLAVDDFGTGYSSLYHLKHMPLHTLKIDQSFVRDLPHVAGSRTIALT 1000 Query: 1049 IQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQP----LDLLVNSSYFAI 1104 + A+ L + IA V M L G ++ G + + A P DLL F + Sbjct: 1001 MLAMARNLDLDVIAEGVETGAQMHFLRDHGCRVVQGFLFSPAVPGDRLFDLLRRGVCFDV 1060 Query: 1105 N 1105 N Sbjct: 1061 N 1061 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 45/367 (12%), Positives = 101/367 (27%), Gaps = 38/367 (10%) Query: 281 NIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQE 340 + + + + F + G+ + G L N A G+++ Sbjct: 488 LVALRDISSRIHTEHRL----NLFELVFRNALEGILITDASGAILAVNPAFTTITGWNER 543 Query: 341 ELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHT 400 + G + L +++ + E + E NG+ L++S +R Sbjct: 544 DAVGRNPRILKSNRHDRGFYERLWHSLH-ERGAWEGEIWNRRINGENYPEWLSISAIRDE 602 Query: 401 DGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFE 460 G ++A DI++LK E + L + E + Sbjct: 603 SGATTNYVALFHDISDLKAKEAQIRYQGMHDALTGLPNRALLLE--RLAGELKEGQGTGR 660 Query: 461 LYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALA 520 L + N++ + + E + + L + E ++ G ++ +A Sbjct: 661 LCGLLYIDIDNFKTINDSLGHEAGDKFIAEVAEHLTLL--IRPEDTLSRLGGDEYVILVA 718 Query: 521 NRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFM 580 N GE ++ + + AL + + +++ + K Sbjct: 719 NP-----GEEREVVLVAERILHHFSQPIALLDRELHVGLSI-----GIAIHPADGK---- 764 Query: 581 NPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDV--VLHC-- 636 +E L ++ E R ++ L Sbjct: 765 ----------GPDELL-TNADLAMYRAKAQGKNTYERFSPHLHDRIRSRMELEGRLRHAL 813 Query: 637 RSGGSYD 643 R G Sbjct: 814 RHGEIVP 820 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 57/401 (14%), Positives = 110/401 (27%), Gaps = 30/401 (7%) Query: 165 IGALALVPLGLLFKPHYLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVL-- 222 L GLL + R + +LL L + LP ++ Sbjct: 241 WQILLDEMPGLLALTDFEGRVQLLNKAGHTLLRLPDGIARGRHRAELLPERIAALLAADN 300 Query: 223 -----------LMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWL 271 L + R + FL V + Sbjct: 301 ERMQREGTPSQLEVTLPRYGHDGSDRTFLVQRFPVRDHSGGMQGVGTVAMEISALKNTEA 360 Query: 272 PFLLILLPA-NIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKA 330 L ++ R + + S T FR +Y+ G+ L +G L N+ Sbjct: 361 GLRQRLTNIEAMVATRTEELRVANEALHRSSTRFRALFDYAPDGLLLQRDDGTLLDCNRM 420 Query: 331 LCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWA 390 LG S+ EL L + + + + + G A Sbjct: 421 AEATLGLSRHELLALKARDICREGHALPVPESEDTPLRTRTELLRG--------GVAFPA 472 Query: 391 LLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPN 450 ++V + +G +A + DI+ TE L GI + Sbjct: 473 EVSVRSL-DIEGERTLLVA-LRDISSRIHTEHRL----NLFELVFRNALEGILITDASGA 526 Query: 451 IFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVK 510 I + + + DR + + SL R ++ E Sbjct: 527 ILAVNPAFTTITGWNERDAVGRNPRILKSNRHDRG-FYERLWHSLHERGAWEGEIWNRRI 585 Query: 511 DGIRHIRALA-NRVLNKEGEVERLLGINMDMTEVKQLNEAL 550 +G + L+ + + ++ G + + D++++K + Sbjct: 586 NGENYPEWLSISAIRDESGATTNYVALFHDISDLKAKEAQI 626 >UniRef50_UPI0001AEC0A6 sensory box protein n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC0A6 Length = 1517 Score = 802 bits (2073), Expect = 0.0, Method: Composition-based stats. Identities = 140/719 (19%), Positives = 275/719 (38%), Gaps = 30/719 (4%) Query: 389 WALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELK 448 W V+LV + F + K + ++ ER+ L + G +W+W++ Sbjct: 799 WLH-TVALVFYCLIAFAIFAFIVRQYQIRKANQLAIKESEERLKLTLWSSGDELWDWDVY 857 Query: 449 PNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSP-FKLEFRI 507 L + P + + P D + +RD L+ S ++L +R Sbjct: 858 RGQVYRANTWGTL-DFPQDDIRTTGAYDANIHPNDVNRVKTALRDHLEGNSDFYELAYRA 916 Query: 508 TV-KDGIRHIRALANRV-LNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIG 565 K+ I V + + R+ G ++ +K+ E L ++++I Sbjct: 917 KTFKNQWIWILDRGKVVERDHNAQPVRMTGTLKNIHHLKEAEEQLN----LFKRSIENIS 972 Query: 566 EAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSR 625 E V + K +N +G T+++AL + L+ E I ++ Sbjct: 973 EGVFITNTQFKFISVNNAYCGYTGETRDQALASYMHFHLYPD-----AFTEEIKKTLKAK 1027 Query: 626 SAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHD 685 +V +G Y++ +I + DG V V D+T + ++L A+ D Sbjct: 1028 GNWSGEVESVRVNGERYEMELNIDAVHDDDGKISHFVGVFSDITSRKSTEKELLKLANTD 1087 Query: 686 ALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELAS 745 LT L NR+ F+ + L+ +H L+ +D+D FK +NDS GH GD L++++A Sbjct: 1088 PLTELPNRSFFQASHQNLV----RKGAQHTLLCLDMDNFKKINDSLGHQTGDILIKQIAK 1143 Query: 746 LMLSMLRSSDVLARLGGDEFGLLLPD-CNVESARFIATRIISAVNDYHFIWEGRVHRVGA 804 + + S RLGGDEF +L+ D ++ + A ++ ++ FI + +GA Sbjct: 1144 RLQRITGKSATCYRLGGDEFSVLMEDNADIHTVTHYAQNLLDTLSR-PFIINKQEFVLGA 1202 Query: 805 SAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWR 864 S GI D+ E++ AD A Y +KN G + + + + + + Sbjct: 1203 SIGIAFFPDDGTSPQEMLKNADTAMYFAKNNGGNSYQFFSGEMNQNAVRQLQIE-NLIRQ 1261 Query: 865 MIKENQLMMLAHGVASPRIPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALD 923 IK++ + I + + + +L + + I+ F + Sbjct: 1262 GIKDDLFTVYYQPKVD--IASGKLVSMEALVRFEHPQKGIVSPGQFIPLAEQTGQIIEIG 1319 Query: 924 RRVFHEFFQQAAKAVASKGI--SISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLII 981 +V + + V +++ +S L + + + L + L P L I Sbjct: 1320 EQVLRKACADTKRWVNQGLFSGRVAVNISAKQFELPDLDDRINKILSDIGLSPLHLECEI 1379 Query: 982 PAEAILDHAES----VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQ 1037 +++ E+ + +LR G + L G LK + L +D ++ Sbjct: 1380 TEGTLMESPENGLQMMTRLRERGIHLALDDFGTGYSSLAYLKRFPLNTLKIDKAFIDDIA 1439 Query: 1038 GNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 + +D + I A LG+K +A V +D L +++ G + + + Sbjct: 1440 KSNVDRHMAAAIINIAHNLGLKVVAEGVEEEAQLDILRRYDCEMLQGFLYSRPLNAERF 1498 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 44/296 (14%), Positives = 104/296 (35%), Gaps = 16/296 (5%) Query: 259 TPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALV 318 P + ++ + + + + + +A + I ESE + + S + Sbjct: 797 PPWLHTVALVFYCLIAFAIFAFIVRQYQI--RKANQLAIKESEERLKLTLWSSGDELWDW 854 Query: 319 GT-EGQWLQTNKALCQFLGYSQEELRGLTFQQL-TWPEDLNKDLQQVEKLISGEINTYSM 376 GQ + N L + Q+++R P D+N+ + + G + Y + Sbjct: 855 DVYRGQVYRANTWGT--LDFPQDDIRTTGAYDANIHPNDVNRVKTALRDHLEGNSDFYEL 912 Query: 377 EKRYYNRNGDVVWALLAVSLV-RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLAN 435 R +W L +V R + P+ +++I+ LK E+ + Sbjct: 913 AYRAKTFKNQWIWILDRGKVVERDHNAQPVRMTGTLKNIHHLKEAEEQL----NLFKRSI 968 Query: 436 EAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSL 495 E G++ + S + + + P+ + I+ +L Sbjct: 969 ENISEGVFITNTQFKFISVNNAYCGYTGETRDQAL-ASYMHFHLYPD---AFTEEIKKTL 1024 Query: 496 QSRSPFKLEFRITVKDGIRH-IRALANRVLNKEGEVERLLGINMDMTEVKQLNEAL 550 +++ + E +G R+ + + V + +G++ +G+ D+T K + L Sbjct: 1025 KAKGNWSGEVESVRVNGERYEMELNIDAVHDDDGKISHFVGVFSDITSRKSTEKEL 1080 Score = 105 bits (264), Expect = 7e-21, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 59/148 (39%), Gaps = 4/148 (2%) Query: 295 KHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPE 354 K E F+ ++E + G+ + T+ +++ N A C + G ++++ +P+ Sbjct: 955 KEAEEQLNLFKRSIENISEGVFITNTQFKFISVNNAYCGYTGETRDQALASYMHFHLYPD 1014 Query: 355 DLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDI 414 ++++K + + N +S E NG+ L + V DG +F+ DI Sbjct: 1015 ---AFTEEIKKTLKAKGN-WSGEVESVRVNGERYEMELNIDAVHDDDGKISHFVGVFSDI 1070 Query: 415 NELKRTEQVNQQLMERITLANEAGGIGI 442 K TE+ +L L Sbjct: 1071 TSRKSTEKELLKLANTDPLTELPNRSFF 1098 >UniRef50_Q30T73 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30T73_SULDN Length = 707 Score = 802 bits (2073), Expect = 0.0, Method: Composition-based stats. Identities = 151/703 (21%), Positives = 303/703 (43%), Gaps = 21/703 (2%) Query: 407 FIAQIED--INELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEI 464 F D +++ + + L+ + A E IG W+ + N W + ++ + Sbjct: 12 FYGINSDSIVDQSNIDIETIKSLIRNLNEAQEIAQIGHWKLNINTNELFWSDETYRIFGL 71 Query: 465 -PPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDG-IRHIRALANR 522 P +KP+++ ++ V +DR SL+ +SP+ + RI KD ++++ Sbjct: 72 KPKEVKPSYENFFTFVHEDDRSLVNDAYIKSLEDKSPYSIIHRIITKDKKLKYVEERCVH 131 Query: 523 VLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNP 582 L++ G V + +G D+TE + + L E + +V D I +N Sbjct: 132 KLDESGNVVKSIGTVHDITERVEHEKEL----EIASNVFKYSSDGIVITDKNNNIVSVNK 187 Query: 583 VAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSY 642 EK++G+++EE +G + + + +N++S+ S ++ + G Y Sbjct: 188 SFEKLTGYSKEEIIGKNPKLL--SSGWGDEEFYKNMWSSLLSNDLWRDELWDRKKDGSLY 245 Query: 643 DVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRI 702 + +I + + + + + +D+TE++ ++ A +D LT L N F++++ Sbjct: 246 AIEQTIICVRDKNQDIVNYIGMSRDITEAKNKEEKIHQLAFYDFLTKLPNAKLFQQEVEA 305 Query: 703 LLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGG 762 +++ + ++ A++F+DLD FK VNDS GH GD LL E+A+ + ++ +++RLGG Sbjct: 306 YIKSTHYNNETFAILFLDLDNFKWVNDSLGHQIGDLLLIEIAAKLKEIISQDSIISRLGG 365 Query: 763 DEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVM 822 DEF +L P N+ + +A I+ +V D + R V S GI+L N +++ Sbjct: 366 DEFVILAPYENLLTISQLANTILCSVKD-PIKVQNREVNVSWSIGISLYPQNGENYNDLL 424 Query: 823 SQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPR 882 AD A Y SKN G+ + R + ++ I N + S Sbjct: 425 KNADAAMYESKNRGKNTFRYFNDMMNQDAMYRLELDTKLRY-AITNNSFFLNYQPKYSFE 483 Query: 883 IPEARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAA--KAVA 939 + + + +L W + I F + + + + V + + Sbjct: 484 --HGKTIGVEALIRWIDKDLGFIAPDKFIPIAEESSYINEIGSWVMKQALNDLKIINSKL 541 Query: 940 SKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQK 995 S ISIS+ +S L + ++ L+ S + P L+ I +I+ + + ++K Sbjct: 542 SSPISISINVSGKQLEHESFYDEARTLLKESGIEPSLVEFEITETSIMQNIDHVVDILKK 601 Query: 996 LRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQR 1055 +++ G +I + G + LK D L +D E ++ + + ++ I A+ Sbjct: 602 IKMLGVKISIDDFGTGYSSMSYLKKLPIDTLKIDREFIKELEIDEDSKSIVNAIIALAKS 661 Query: 1056 LGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVN 1098 + T+A V L G+ D+ G + + LD L+ Sbjct: 662 FKLTTVAEGVENEEQKLILDGLNCDMTQGYLYSRPLSLDDLLA 704 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 83/254 (32%), Gaps = 9/254 (3%) Query: 302 THFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRG--LTFQQLTWPEDLNKD 359 + A E + IG + L + + G +E++ F +D + Sbjct: 36 RNLNEAQEIAQIGHWKLNINTNELFWSDETYRIFGLKPKEVKPSYENFFTFVHEDDRSLV 95 Query: 360 LQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKR 419 K + + YS+ R ++ + + G + I + DI E Sbjct: 96 NDAYIKSLEDKSP-YSIIHRIITKDKKLKYVEERCVHKLDESGNVVKSIGTVHDITERVE 154 Query: 420 TEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECV 479 E+ + + GI + NI S +K +L Sbjct: 155 HEKELEIASN----VFKYSSDGIVITDKNNNIVSVNKSFEKLTGYSKEEIIGKNPKLLSS 210 Query: 480 LPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRH-IRALANRVLNKEGEVERLLGINM 538 D + K + SL S ++ E KDG + I V +K ++ +G++ Sbjct: 211 GWGD-EEFYKNMWSSLLSNDLWRDELWDRKKDGSLYAIEQTIICVRDKNQDIVNYIGMSR 269 Query: 539 DMTEVKQLNEALFQ 552 D+TE K E + Q Sbjct: 270 DITEAKNKEEKIHQ 283 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 58/162 (35%), Gaps = 5/162 (3%) Query: 277 LLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLG 336 ++ + + K + + N +YS+ G+ + + NK+ + G Sbjct: 139 VVKSIGTVHDITERVEHEKELEIA----SNVFKYSSDGIVITDKNNNIVSVNKSFEKLTG 194 Query: 337 YSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSL 396 YS+EE+ G + L+ + + + + + + E ++G + + Sbjct: 195 YSKEEIIGKNPKLLSSGWGDEEFYKNMWSSLLSN-DLWRDELWDRKKDGSLYAIEQTIIC 253 Query: 397 VRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAG 438 VR + + +I DI E K E+ QL L Sbjct: 254 VRDKNQDIVNYIGMSRDITEAKNKEEKIHQLAFYDFLTKLPN 295 >UniRef50_B4RTU5 Sensory box protein n=2 Tax=Alteromonadales RepID=B4RTU5_ALTMD Length = 1510 Score = 799 bits (2064), Expect = 0.0, Method: Composition-based stats. Identities = 135/698 (19%), Positives = 272/698 (38%), Gaps = 29/698 (4%) Query: 410 QIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIK 469 + K + ++ ER+ L + G +W+W++ L + P Sbjct: 812 IVRQYQIRKANQLAIKESEERLKLTLWSSGDELWDWDVYRGQVYRANTWGTL-DFPQDDI 870 Query: 470 PNWQVWYECVLPEDRQHAEKVIRDSLQSRSP-FKLEFRITV-KDGIRHIRALANRV-LNK 526 + + P D + +R+ L+ S ++L +R K+ I V + Sbjct: 871 RTTGAYDANIHPNDINRVKTALREHLEGNSDFYELAYRAKTFKNQWIWILDRGKVVERDH 930 Query: 527 EGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEK 586 + R+ G ++ +K+ E L ++++I E V + K +N + Sbjct: 931 NEQPVRMTGTLKNIHHLKEAEEQLN----LFKRSIENISEGVFITNTQFKFISVNNAYCR 986 Query: 587 MSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHY 646 +G T+E+AL + L+ E I ++S +V +G Y++ Sbjct: 987 YTGETREQALASYMHFHLYPD-----AFTEEIKKTLKTKSNWSGEVESVRVNGERYEMEL 1041 Query: 647 SITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQT 706 +I + DG V V D+T + ++L A+ D LT L NR+ F+ + L++ Sbjct: 1042 NIDAVHDEDGKISHFVGVFSDITSRKSTEKELLKLANVDPLTELPNRSFFQASHQNLVRK 1101 Query: 707 VNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFG 766 +H+L+ +D+D FK +NDS GH GD L++++A + + + RLGGDEF Sbjct: 1102 AA----QHSLLCLDMDNFKKINDSLGHQTGDILIKQIAKRLQRITGKNATCYRLGGDEFS 1157 Query: 767 LLLPD-CNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQA 825 +L+ D ++ + A ++ ++ FI + +GAS GI D+ E++ A Sbjct: 1158 ILMEDNADIHTVTHYAQNLLDTLSR-PFIINKQEFVLGASIGIAFFPDDGESPQEMLKNA 1216 Query: 826 DIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPE 885 D A Y +KN G + + + + + + IK++ + I Sbjct: 1217 DTAMYFAKNNGGNSYQFFSGEMNQNAVRQLQIE-NLIRQGIKDDLFTVYYQPKVD--IAS 1273 Query: 886 ARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGI- 943 + + + +L + + I+ F + +V + + V Sbjct: 1274 GKLVSMEALVRFEHPQKGIVSPGQFIPLAEQTGQIIEIGEQVLRKACADTKRWVNQGLFS 1333 Query: 944 -SISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAES----VQKLRL 998 +++ +S L + + + L + L P L I +++ E+ + +LR Sbjct: 1334 GRVAVNISAKQFELPDLDDRINKILSDVGLSPLHLECEITEGTLMESPENGLQMMTRLRE 1393 Query: 999 AGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGM 1058 G + L G LK + L +D ++ + +D + I A LG+ Sbjct: 1394 RGIHLALDDFGTGYSSLAYLKRFPLNTLKIDKAFIDDIAKSNVDRHMAAAIINIAHNLGL 1453 Query: 1059 KTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLL 1096 K +A V +D L +++ G + + + Sbjct: 1454 KVVAEGVEEESQLDILRRYDCEMLQGFLYSRPLNAERF 1491 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 46/296 (15%), Positives = 108/296 (36%), Gaps = 16/296 (5%) Query: 259 TPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALV 318 P + ++ + + +L + + +A + I ESE + + S + Sbjct: 790 PPWLHAVALVFYCIVAFAILAFIVRQYQI--RKANQLAIKESEERLKLTLWSSGDELWDW 847 Query: 319 GT-EGQWLQTNKALCQFLGYSQEELRGLTFQQL-TWPEDLNKDLQQVEKLISGEINTYSM 376 GQ + N L + Q+++R P D+N+ + + + G + Y + Sbjct: 848 DVYRGQVYRANTWGT--LDFPQDDIRTTGAYDANIHPNDINRVKTALREHLEGNSDFYEL 905 Query: 377 EKRYYNRNGDVVWALLAVSLV-RHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLAN 435 R +W L +V R + P+ +++I+ LK E+ + Sbjct: 906 AYRAKTFKNQWIWILDRGKVVERDHNEQPVRMTGTLKNIHHLKEAEEQL----NLFKRSI 961 Query: 436 EAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSL 495 E G++ + S + + + P+ + I+ +L Sbjct: 962 ENISEGVFITNTQFKFISVNNAYCRYTGETREQAL-ASYMHFHLYPD---AFTEEIKKTL 1017 Query: 496 QSRSPFKLEFRITVKDGIRH-IRALANRVLNKEGEVERLLGINMDMTEVKQLNEAL 550 +++S + E +G R+ + + V +++G++ +G+ D+T K + L Sbjct: 1018 KTKSNWSGEVESVRVNGERYEMELNIDAVHDEDGKISHFVGVFSDITSRKSTEKEL 1073 Score = 107 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 79/227 (34%), Gaps = 11/227 (4%) Query: 295 KHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPE 354 K E F+ ++E + G+ + T+ +++ N A C++ G ++E+ +P+ Sbjct: 948 KEAEEQLNLFKRSIENISEGVFITNTQFKFISVNNAYCRYTGETREQALASYMHFHLYPD 1007 Query: 355 DLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDI 414 ++++K + + N +S E NG+ L + V DG +F+ DI Sbjct: 1008 ---AFTEEIKKTLKTKSN-WSGEVESVRVNGERYEMELNIDAVHDEDGKISHFVGVFSDI 1063 Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQV 474 K TE+ +L L + L N++ Sbjct: 1064 TSRKSTEKELLKLANVDPLTELPNRSFF---QASHQNLVRKAAQHSLL---CLDMDNFKK 1117 Query: 475 WYECVLPEDRQHAEKVIRDSLQSRSPFKLE-FRITVKDGIRHIRALA 520 + + + K I LQ + +R+ + + A Sbjct: 1118 INDSLGHQTGDILIKQIAKRLQRITGKNATCYRLGGDEFSILMEDNA 1164 >UniRef50_B8GQW3 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GQW3_THISH Length = 926 Score = 798 bits (2063), Expect = 0.0, Method: Composition-based stats. Identities = 158/707 (22%), Positives = 292/707 (41%), Gaps = 37/707 (5%) Query: 415 NELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIF-SWDKRMFELYEIPPHIKPNWQ 473 + L++ + +ER+ +WE E + + + I Sbjct: 225 STLRQQNLKLNRSVERMEALLRGAEAVLWEAEPATGQWRFVNGDTQAILGISAQQIGQPG 284 Query: 474 VWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIR-HIRALANRVLNKEGEVER 532 + V +D + R + +P +++R + +R + + + +G Sbjct: 285 IREARVHADDLPRLRETYRQAGP--TPSSVDYRYRSNEASWVWLRDIVSSASDSDGHAV- 341 Query: 533 LLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQ 592 L G+ +D++ +Q AL + R ++ + E + D + T +NP E+++G++ Sbjct: 342 LRGLTLDVSPQRQAALALKDSESRYREVIEHVSEVIFRTDHQGRWTLLNPAWEELTGYSI 401 Query: 593 EEALGVPLLTVLHITFGDNGPLMENIYSADTSR--SAIEQDVVLHCRSGGSYDVHYSITP 650 E+LG P+ + ++ PL+E + + S + ++ L R+G V + Sbjct: 402 AESLGRPVSEFVS---AEDSPLLEALTNQLLHGNKSQLRDELRLLTRAGEPRWVSVFVRS 458 Query: 651 LSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNST 710 +G I + + D+TE ++ ++ A +D+LT L NR+ +LR+ + + + Sbjct: 459 SQDAEGRVIATFGTLTDITERKRAEEEIRRLAFYDSLTELPNRSLLYDRLRLAMASAARS 518 Query: 711 HQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLP 770 A++F+DLD FK +ND+ GH GD LLR++AS M +R +D LARLGGDEF ++L Sbjct: 519 RHHGAILFLDLDNFKDINDTLGHDVGDELLRQVASRMQGTIRETDTLARLGGDEFVIILN 578 Query: 771 DCNVE------SARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQ 824 D + E A + ++++ + + F S G TL D E++ Q Sbjct: 579 DLHPEQAQAAVEAETLGSKLLHLLAE-PFRLGEHERHCTPSIGATLFGDGEVNVDELLKQ 637 Query: 825 ADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIP 884 AD+A Y +K+ GR + +EP+ RAA+ D + + ++E+QL + Sbjct: 638 ADLAMYRAKDSGRNTLCFFEPEMHQVVKARAALEADFR-KALREDQLHLHYQPHVD---D 693 Query: 885 EARNLWLISLKLW-SCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKG- 942 + L +L W E ++ F L L R V QQ A Sbjct: 694 QGHILGAEALLRWSHPERGMVPPMEFIAVAEQTGLIIKLGRWVLQTACQQLALWHRESQW 753 Query: 943 --ISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLII--------PAEAILDHAES 992 I++++ +S V ++ E L+++ P + L L + I Sbjct: 754 MRINMAVNVSAKQFRHPDFVREVAEILQSTGAPAQHLVLELTESLLLEDTETVI----TR 809 Query: 993 VQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGH 1052 + LR G L G + LK L +D ++ + D + +I Sbjct: 810 MNALRELGVGFALDDFGTGYSSLSYLKRLPLSLLKIDQSFVRDILVDANDAAIAEMIITL 869 Query: 1053 AQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNS 1099 A+ LG++ IA V P D L +G G + P+D L Sbjct: 870 AKTLGLEVIAEGVETPEQRDFLLEMGCHQFQGYLFGRPGPVDQLEKR 916 Score = 140 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 41/257 (15%), Positives = 85/257 (33%), Gaps = 4/257 (1%) Query: 281 NIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQE 340 +T+ + R + +SE+ +R +E+ + + +G+W N A + GYS Sbjct: 343 RGLTLDVSPQRQAALALKDSESRYREVIEHVSEVIFRTDHQGRWTLLNPAWEELTGYSIA 402 Query: 341 ELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHT 400 E G + ED +L+ G + E R R G+ W + V + Sbjct: 403 ESLGRPVSEFVSAEDSPLLEALTNQLLHGNKSQLRDELRLLTRAGEPRWVSVFVRSSQDA 462 Query: 401 DGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFE 460 +G + + DI E KR E+ ++L +L +++ + + Sbjct: 463 EGRVIATFGTLTDITERKRAEEEIRRLAFYDSLTELPNRSLLYD---RLRLAMASAARSR 519 Query: 461 LYE-IPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRAL 519 + I N++ + + + + + +Q D I Sbjct: 520 HHGAILFLDLDNFKDINDTLGHDVGDELLRQVASRMQGTIRETDTLARLGGDEFVIILND 579 Query: 520 ANRVLNKEGEVERLLGI 536 + + LG Sbjct: 580 LHPEQAQAAVEAETLGS 596 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.174 0.583 Lambda K H 0.267 0.0534 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,547,048,718 Number of Sequences: 3077464 Number of extensions: 471546074 Number of successful extensions: 1644331 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 39818 Number of HSP's successfully gapped in prelim test: 16497 Number of HSP's that attempted gapping in prelim test: 1316355 Number of HSP's gapped (non-prelim): 144931 length of query: 1105 length of database: 1,040,396,356 effective HSP length: 140 effective length of query: 965 effective length of database: 609,551,396 effective search space: 588217097140 effective search space used: 588217097140 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 100 (42.7 bits)