403 c3ks6A_ Probab=28.02   E-value=25  Score=12.03  Aligned_columns=134  Identities=16%

Q ss_pred             HHHHHHHCCCCCCEEEEEC--CHHHHCCCHHHHHHHHHHHHCCCCHHHEEEEECHHHHHHHHHHHHHHHHCCCEEEEECC
Q ss_conf             9999985289995799974--97782590279999999988199976899985255885119999999987989999189
Q batch____       931 FQQAAKAVASKGISISLPL--SVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQKLRLAGCRIVLSQV 1008 (1105)
Q Consensus       931 ~~~~~~~~~~~~~~~~vnl--s~~~l~~~~~~~~~~~~l~~~~~~~~~l~~ei~E~~~~~~~~~l~~l~~~G~~~~iddf 1008 (1105)
                      +...........+.+.+.+  ....+....+...+...+++++.....+..-.....       ++.+++......+-..
T Consensus        88 l~~~~~~~~~~~~~~~~e~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~-------~~~~~~~~~~~~~~~~  160 (250)
T c3ks6A_          88 LEELCALYVDSHVNFRCEIKPGVDGLPYEGFVALVIAGLERHSXLERTTFSSFLLAS-------XDELWKATTRPRLWLV  160 (250)
T ss_dssp             HHHHHHHHTTCSCEEEEEECCCTTSCCCTTHHHHHHHHHHHTTCGGGEEEEESCHHH-------HHHHHHHCCSCEEEEE
T ss_pred             HHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHH-------HHHHHHHCCCCCEEEE
T ss_conf             999999720689749998427775431688999999999864997723999689899-------9999985898819998


Q ss_pred             CCCH-------HHHHHHHHCCCCEEEEEHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCE
Q ss_conf             7534-------558898728998898706786475689677999999999998779939996039989999999709979
Q batch____      1009 GRDL-------QIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDL 1081 (1105)
Q Consensus      1009 G~g~-------ss~~~l~~~~~d~iKid~~~~~~~~~~~~~~~~~~~i~~~a~~~~~~~vaegve~~~~~~~l~~~g~~~ 1081 (1105)
                      +...       +.........++.+-++.....            ..++.-+|..|+.|.+=.|+++++++.+..+|+|.
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~g~~v~~wtv~~~~~~~~~~~~Gvd~  228 (250)
T c3ks6A_         161 SPSVLQQLGPGAVIETAIAHSIHEIGVHIDTAD------------AGLXAQVQAAGLDFGCWAAHTPSQITKALDLGVKV  228 (250)
T ss_dssp             CHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGCC------------HHHHHHHHHTTCEEEEECCCSHHHHHHHHHHTCSE
T ss_pred             ECCCCCCCCHHHHHHHHHHCCCCEEEEECCCCC------------HHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCE
T ss_conf             410002379689998897519949993021278------------99999998659889997279989999999769989


Q ss_pred             EE
Q ss_conf             96
Q batch____      1082 IY 1083 (1105)
Q Consensus      1082 ~Q 1083 (1105)
                      ++
T Consensus       229 I~  230 (250)
T c3ks6A_         229 FT  230 (250)
T ss_dssp             EE
T ss_pred             EE
T ss_conf             99