BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (509 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0AFE9 NADH-quinone oxidoreductase subunit M n=205 Tax=... 1014 0.0 UniRef50_Q9I0J0 NADH-quinone oxidoreductase subunit M n=15 Tax=B... 724 0.0 UniRef50_A4XV13 Proton-translocating NADH-quinone oxidoreductase... 717 0.0 UniRef50_D2U4G9 NADH-quinone oxidoreductase chain M n=1 Tax=Arse... 657 0.0 UniRef50_Q7VRW3 NADH dehydrogenase I chain M n=2 Tax=Gammaproteo... 560 e-158 UniRef50_P57263 NADH-quinone oxidoreductase subunit M n=4 Tax=Bu... 528 e-148 UniRef50_Q89AT5 NADH-quinone oxidoreductase subunit M n=2 Tax=ce... 460 e-128 UniRef50_B1KJV9 Proton-translocating NADH-quinone oxidoreductase... 436 e-121 UniRef50_Q39ZA6 Proton-translocating NADH-quinone oxidoreductase... 346 1e-93 UniRef50_Q2IN04 Proton-translocating NADH-quinone oxidoreductase... 336 1e-90 UniRef50_A4WT79 Proton-translocating NADH-quinone oxidoreductase... 333 6e-90 UniRef50_UPI0001910235 NADH dehydrogenase subunit M n=2 Tax=Salm... 333 7e-90 UniRef50_C1AB27 NADH-quinone oxidoreductase chain M n=1 Tax=Gemm... 331 5e-89 UniRef50_B0BZT1 Proton-translocating NAD(P)H-quinone oxidoreduct... 330 8e-89 UniRef50_C4XMN2 NADH-quinone oxidoreductase chain M n=1 Tax=Desu... 324 5e-87 UniRef50_A9B6Y1 Proton-translocating NADH-quinone oxidoreductase... 323 9e-87 UniRef50_A6FCN8 NuoM2 NADH-Ubiquinone/plastoquinone (Complex I) ... 321 3e-86 UniRef50_D0L251 Proton-translocating NADH-quinone oxidoreductase... 321 4e-86 UniRef50_D2L238 Proton-translocating NADH-quinone oxidoreductase... 319 1e-85 UniRef50_B9L177 Nadh-quinone oxidoreductase chain m n=1 Tax=Ther... 319 2e-85 UniRef50_D0LZ06 Proton-translocating NADH-quinone oxidoreductase... 316 1e-84 UniRef50_Q1NQL7 Proton-translocating NADH-quinone oxidoreductase... 315 3e-84 UniRef50_Q2S2L1 NADH dehydrogenase i, m subunit n=7 Tax=Bacteria... 315 3e-84 UniRef50_B1ZA34 Proton-translocating NADH-quinone oxidoreductase... 314 5e-84 UniRef50_Q3BRP1 NADH-ubiquinone oxidoreductase NQO13 subunit n=1... 310 6e-83 UniRef50_A7NEJ8 NADH-quinone oxidoreductase, subunit M n=19 Tax=... 309 1e-82 UniRef50_D1C6X8 Proton-translocating NADH-quinone oxidoreductase... 306 1e-81 UniRef50_C3XM21 NADH-ubiquinone oxidoreductase n=4 Tax=Campyloba... 306 1e-81 UniRef50_Q7NHJ9 NADH dehydrogenase subunit 4 n=1 Tax=Gloeobacter... 305 3e-81 UniRef50_Q02CT2 Proton-translocating NADH-quinone oxidoreductase... 303 9e-81 UniRef50_Q1IS53 Proton-translocating NADH-quinone oxidoreductase... 303 1e-80 UniRef50_P93313 NADH-ubiquinone oxidoreductase chain 4 n=140 Tax... 303 1e-80 UniRef50_Q1RKE5 NADH-quinone oxidoreductase subunit M n=17 Tax=R... 302 2e-80 UniRef50_D2SHE2 Proton-translocating NADH-quinone oxidoreductase... 301 4e-80 UniRef50_Q6MGN7 NADH dehydrogenase I chain M n=3 Tax=Bacteria Re... 300 6e-80 UniRef50_Q7V4E4 NAD(P)H-quinone oxidoreductase chain 4 n=43 Tax=... 300 8e-80 UniRef50_D2R5F8 Proton-translocating NADH-quinone oxidoreductase... 299 1e-79 UniRef50_A1KRT7 NADH dehydrogenase chain M n=30 Tax=Proteobacter... 297 5e-79 UniRef50_C1DT37 NADH-quinone oxidoreductase subunit m (Nadhdehyd... 297 6e-79 UniRef50_A9F578 NADH dehydrogenase I chain M n=1 Tax=Sorangium c... 296 9e-79 UniRef50_A0B819 F420H2 dehydrogenase subunit M n=2 Tax=Methanosa... 296 1e-78 UniRef50_Q1ZRW3 NADH dehydrogenase I, M subunit n=2 Tax=Photobac... 296 1e-78 UniRef50_Q057W4 NADH dehydrogenase I chain M n=1 Tax=Buchnera ap... 295 4e-78 UniRef50_C6BS86 Proton-translocating NADH-quinone oxidoreductase... 292 2e-77 UniRef50_D1AZ50 Proton-translocating NADH-quinone oxidoreductase... 292 2e-77 UniRef50_C4XGW9 NADH-quinone oxidoreductase chain M n=3 Tax=Desu... 290 1e-76 UniRef50_B5YKJ1 NADH-quinone oxidoreductase chain m n=15 Tax=cel... 289 2e-76 UniRef50_B8DS13 Proton-translocating NADH-quinone oxidoreductase... 288 4e-76 UniRef50_D2L5S8 Proton-translocating NADH-quinone oxidoreductase... 287 6e-76 UniRef50_B0SFU4 NADH dehydrogenase (Ubiquinone), M chain n=6 Tax... 286 1e-75 UniRef50_Q37617 NADH-ubiquinone oxidoreductase chain 4 n=80 Tax=... 286 1e-75 UniRef50_Q1DDD2 NADH dehydrogenase I, M subunit n=2 Tax=Cystobac... 286 1e-75 UniRef50_Q0RRV6 NADH-quinone oxidoreductase chain M (NADH dehydr... 285 3e-75 UniRef50_C1ZFV0 NADH dehydrogenase subunit M n=1 Tax=Planctomyce... 284 6e-75 UniRef50_Q9G8V8 NADH-ubiquinone oxidoreductase chain 4 n=8 Tax=E... 282 2e-74 UniRef50_C1A8Y2 NADH-quinone oxidoreductase chain M n=1 Tax=Gemm... 282 3e-74 UniRef50_Q37401 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=A... 280 1e-73 UniRef50_D1CCC3 Proton-translocating NADH-quinone oxidoreductase... 279 2e-73 UniRef50_Q3Z7Z2 Proton-translocating NADH-quinone oxidoreductase... 278 3e-73 UniRef50_Q30PJ1 Proton-translocating NADH-quinone oxidoreductase... 278 4e-73 UniRef50_B3QY39 Proton-translocating NADH-quinone oxidoreductase... 278 5e-73 UniRef50_Q5FHA2 NADH-quinone oxidoreductase chain M n=11 Tax=Ric... 277 8e-73 UniRef50_A9EX60 NADH dehydrogenase (Ubiquinone) n=1 Tax=Sorangiu... 274 6e-72 UniRef50_D2RZ76 Proton-translocating NADH-quinone oxidoreductase... 273 1e-71 UniRef50_A3ZKZ8 Proton-translocating NADH-quinone oxidoreductase... 273 2e-71 UniRef50_Q3A816 NADH dehydrogenase I chain M n=1 Tax=Pelobacter ... 273 2e-71 UniRef50_Q67KP5 NADH dehydrogenase I subunit M n=1 Tax=Symbiobac... 271 3e-71 UniRef50_A7H9U2 Proton-translocating NADH-quinone oxidoreductase... 271 4e-71 UniRef50_C1F9D1 NADH dehydrogenase I, M subunit n=1 Tax=Acidobac... 271 5e-71 UniRef50_A5UVF7 Proton-translocating NADH-quinone oxidoreductase... 271 6e-71 UniRef50_O47497 NADH-ubiquinone oxidoreductase chain 4 n=50 Tax=... 269 2e-70 UniRef50_C3XEB0 NADH-quinone oxidoreductase subunit M n=1 Tax=He... 268 5e-70 UniRef50_Q3MAR0 NAD(P)H-quinone oxidoreductase chain 4 2 n=84 Ta... 266 1e-69 UniRef50_D2QSX5 Proton-translocating NADH-quinone oxidoreductase... 266 1e-69 UniRef50_C8XBD3 Proton-translocating NADH-quinone oxidoreductase... 265 2e-69 UniRef50_D2M1W1 Proton-translocating NADH-quinone oxidoreductase... 265 4e-69 UniRef50_B7K6C0 Proton-translocating NADH-quinone oxidoreductase... 264 6e-69 UniRef50_Q85JB2 NADH-ubiquinone oxidoreductase chain 4 n=4 Tax=M... 263 1e-68 UniRef50_B5IL09 NAD(P)H dehydrogenase I, subunit D-2 n=3 Tax=Cya... 262 2e-68 UniRef50_A7UQZ1 AGAP012727-PA (Fragment) n=1 Tax=Anopheles gambi... 261 4e-68 UniRef50_B8G566 Proton-translocating NADH-quinone oxidoreductase... 261 6e-68 UniRef50_C5AJH4 Proton-translocating NADH-quinone oxidoreductase... 260 9e-68 UniRef50_A4FPS9 NADH dehydrogenase I chain M n=1 Tax=Saccharopol... 259 2e-67 UniRef50_C6X103 NADH-ubiquinone oxidoreductase chain M n=2 Tax=F... 259 2e-67 UniRef50_B7GME2 NADH dehydrogenase subunit M n=6 Tax=Bacillaceae... 258 5e-67 UniRef50_Q466B7 F420H2 dehydrogenase subunit M n=3 Tax=Methanosa... 258 5e-67 UniRef50_Q0BU96 NADH-quinone oxidoreductase chain M n=12 Tax=Ace... 257 6e-67 UniRef50_B0CBT4 Proton-translocating NAD(P)H-quinone oxidoreduct... 257 6e-67 UniRef50_UPI00019790B7 NADH dehydrogenase subunit M n=1 Tax=Heli... 256 1e-66 UniRef50_Q46LV6 Proton-translocating NADH-quinone oxidoreductase... 256 1e-66 UniRef50_C7PRG9 Proton-translocating NADH-quinone oxidoreductase... 255 3e-66 UniRef50_UPI0001C3347B NADH dehydrogenase subunit M n=6 Tax=Cyan... 255 3e-66 UniRef50_Q0H8X6 NADH-ubiquinone oxidoreductase chain 4 n=10 Tax=... 254 7e-66 UniRef50_A1T694 Proton-translocating NADH-quinone oxidoreductase... 254 7e-66 UniRef50_C2KMP1 NADH dehydrogenase (Quinone) n=4 Tax=Actinomycet... 253 1e-65 UniRef50_C5C0R5 Proton-translocating NADH-quinone oxidoreductase... 252 2e-65 UniRef50_P26288 NAD(P)H-quinone oxidoreductase chain 4, chloropl... 252 3e-65 UniRef50_Q6UVR8 NADH-ubiquinone oxidoreductase chain 4 n=5 Tax=V... 251 5e-65 UniRef50_Q950R4 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=S... 250 8e-65 UniRef50_B9XFX2 Proton-translocating NADH-quinone oxidoreductase... 250 1e-64 UniRef50_C1ZAS9 NADH dehydrogenase subunit M n=1 Tax=Planctomyce... 249 2e-64 UniRef50_C6V5H6 NADH-quinone oxidoreductase chain m n=2 Tax=Neor... 249 2e-64 UniRef50_UPI0001C3127E proton-translocating NADH-quinone oxidore... 248 3e-64 UniRef50_Q11VC4 NADH dehydrogenase I chain M n=1 Tax=Cytophaga h... 246 1e-63 UniRef50_B2TCE8 Proton-translocating NADH-quinone oxidoreductase... 246 1e-63 UniRef50_A5FKK8 NADH dehydrogenase subunit M n=2 Tax=Flavobacter... 246 1e-63 UniRef50_Q2GKR0 NADH dehydrogenase I, M subunit n=5 Tax=Anaplasm... 245 2e-63 UniRef50_Q9MD18 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=S... 244 4e-63 UniRef50_A9YMC4 NADH-ubiquinone oxidoreductase chain 4 n=17 Tax=... 244 6e-63 UniRef50_Q3JBP7 Proton-translocating NADH-quinone oxidoreductase... 244 7e-63 UniRef50_A6Q8K1 NADH-quinone oxidoreductase, chain M n=3 Tax=Eps... 243 9e-63 UniRef50_B8FRJ8 Proton-translocating NADH-quinone oxidoreductase... 243 1e-62 UniRef50_Q3T4B9 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=S... 242 3e-62 UniRef50_C0ZYI8 NADH-quinone oxidoreductase chain M n=22 Tax=Act... 240 9e-62 UniRef50_C7P4L7 Proton-translocating NADH-quinone oxidoreductase... 240 1e-61 UniRef50_B0R3V0 NADH dehydrogenase-like complex subunit M n=9 Ta... 239 2e-61 UniRef50_B4U8I0 Proton-translocating NADH-quinone oxidoreductase... 239 2e-61 UniRef50_C7M2U9 Proton-translocating NADH-quinone oxidoreductase... 238 6e-61 UniRef50_Q9G8P5 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=N... 237 1e-60 UniRef50_Q1AZS5 Proton-translocating NADH-quinone oxidoreductase... 234 4e-60 UniRef50_Q1AVJ1 Proton-translocating NADH-quinone oxidoreductase... 234 4e-60 UniRef50_A1API0 Proton-translocating NADH-quinone oxidoreductase... 234 7e-60 UniRef50_Q3JBP3 Proton-translocating NADH-quinone oxidoreductase... 234 7e-60 UniRef50_A7NL13 Proton-translocating NADH-quinone oxidoreductase... 232 2e-59 UniRef50_UPI00016C46D6 proton-translocating NADH-quinone oxidore... 232 3e-59 UniRef50_A5UXL0 Proton-translocating NADH-quinone oxidoreductase... 230 8e-59 UniRef50_A1SE39 Proton-translocating NADH-quinone oxidoreductase... 230 9e-59 UniRef50_Q37375 NADH-ubiquinone oxidoreductase chain 4 n=2 Tax=E... 230 1e-58 UniRef50_C0VVK4 NADH dehydrogenase subunit M n=2 Tax=Corynebacte... 230 1e-58 UniRef50_B9XFX1 Proton-translocating NADH-quinone oxidoreductase... 229 1e-58 UniRef50_O53307 NADH-quinone oxidoreductase subunit M n=26 Tax=A... 228 3e-58 UniRef50_A8ERK4 NADH-quinone oxidoreductase, M subunit n=1 Tax=A... 228 3e-58 UniRef50_B1ZBB1 Proton-translocating NADH-quinone oxidoreductase... 227 1e-57 UniRef50_C0Z764 NADH-quinone oxidoreductase chain M n=2 Tax=Baci... 227 1e-57 UniRef50_A0LEQ7 Proton-translocating NADH-quinone oxidoreductase... 227 1e-57 UniRef50_Q9TAK8 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=C... 226 1e-57 UniRef50_Q11RU7 NADH:ubiquinone oxidoreductase chain M n=4 Tax=F... 225 3e-57 UniRef50_Q5EM42 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=M... 224 4e-57 UniRef50_C6D5D3 Proton-translocating NADH-quinone oxidoreductase... 223 1e-56 UniRef50_Q950M6 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=R... 223 2e-56 UniRef50_Q6MDQ4 Putative NADH-ubiquinone oxidoreductase chain M ... 222 2e-56 UniRef50_D2PVJ1 Proton-translocating NADH-quinone oxidoreductase... 222 3e-56 UniRef50_D2SDG3 Proton-translocating NADH-quinone oxidoreductase... 222 3e-56 UniRef50_B9XHI7 Proton-translocating NADH-quinone oxidoreductase... 221 5e-56 UniRef50_Q0FXW0 NADH dehydrogenase subunit 4 n=3 Tax=Alphaproteo... 221 6e-56 UniRef50_C1F222 NADH dehydrogenase I, M subunit n=1 Tax=Acidobac... 221 6e-56 UniRef50_UPI0001C30612 NADH dehydrogenase subunit 4 n=1 Tax=Phae... 217 1e-54 UniRef50_B9W1R4 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=G... 215 3e-54 UniRef50_C9MQ80 NADH dehydrogenase, M subunit n=18 Tax=Bacteroid... 214 7e-54 UniRef50_B7HY49 NADH dehydrogenase (Ubiquinone), M subunit n=71 ... 213 1e-53 UniRef50_C7FEW5 NADH-ubiquinone oxidoreductase chain 4 n=2 Tax=S... 213 2e-53 UniRef50_D1A432 Proton-translocating NADH-quinone oxidoreductase... 213 2e-53 UniRef50_A7H5R9 NADH-quinone oxidoreductase, M subunit n=15 Tax=... 212 3e-53 UniRef50_A9B486 Proton-translocating NADH-quinone oxidoreductase... 211 6e-53 UniRef50_A6L163 NADH dehydrogenase I chain M n=18 Tax=Bacteroide... 211 6e-53 UniRef50_B9KDW0 NADH-quinone oxidoreductase, M subunit n=1 Tax=C... 210 9e-53 UniRef50_A3YZD4 NADH dehydrogenase subunit 4 n=1 Tax=Synechococc... 209 2e-52 UniRef50_Q9ZJV5 NADH oxidoreductase I n=12 Tax=Helicobacter RepI... 209 3e-52 UniRef50_C1F221 NADH dehydrogenase I, M subunit n=1 Tax=Acidobac... 208 4e-52 UniRef50_D1BBE0 NADH dehydrogenase subunit M n=1 Tax=Sanguibacte... 208 5e-52 UniRef50_C7RLG5 Proton-translocating NADH-quinone oxidoreductase... 207 5e-52 UniRef50_D1BW17 Proton-translocating NADH-quinone oxidoreductase... 207 9e-52 UniRef50_A3THE8 Putative NADH dehydrogenase I chain M n=1 Tax=Ja... 205 3e-51 UniRef50_Q1IZW1 NADH-quinone oxidoreductase, M subunit n=3 Tax=D... 203 1e-50 UniRef50_D1PWI6 Proton-translocating NADH-quinone oxidoreductase... 203 1e-50 UniRef50_Q47IK6 Proton-translocating NADH-quinone oxidoreductase... 202 2e-50 UniRef50_D2B4L0 NADH dehydrogenase (Quinone) n=17 Tax=Actinomyce... 202 3e-50 UniRef50_C0AF36 NADH dehydrogenase (Quinone) (Fragment) n=1 Tax=... 201 5e-50 UniRef50_C9RKX5 Proton-translocating NADH-quinone oxidoreductase... 201 5e-50 UniRef50_C9RWL8 Proton-translocating NADH-quinone oxidoreductase... 201 5e-50 UniRef50_B1ZRS1 Proton-translocating NADH-quinone oxidoreductase... 201 6e-50 UniRef50_P15582 NADH-ubiquinone oxidoreductase chain 4 n=34 Tax=... 201 8e-50 UniRef50_A7XPD6 NADH-ubiquinone oxidoreductase chain 4 n=58 Tax=... 200 1e-49 UniRef50_O21047 NADH-ubiquinone oxidoreductase chain 4 n=3 Tax=D... 199 3e-49 UniRef50_A0RME0 NADH-quinone oxidoreductase chain m n=1 Tax=Camp... 196 2e-48 UniRef50_B2XX63 NADH-ubiquinone oxidoreductase chain 4 n=3 Tax=D... 192 2e-47 UniRef50_Q5N0H9 NADH dehydrogenase subunit 4 n=7 Tax=Cyanobacter... 192 3e-47 UniRef50_A9RAH8 NADH-ubiquinone oxidoreductase chain 4 n=7 Tax=S... 190 9e-47 UniRef50_C7RLG1 Proton-translocating NADH-quinone oxidoreductase... 190 1e-46 UniRef50_C9RJZ1 Proton-translocating NADH-quinone oxidoreductase... 188 4e-46 UniRef50_D2EEH3 Proton-translocating NADH-quinone oxidoreductase... 187 8e-46 UniRef50_A4X1Y9 Proton-translocating NADH-quinone oxidoreductase... 187 8e-46 UniRef50_UPI000038E626 NADH dehydrogenase subunit M n=1 Tax=Ferr... 185 3e-45 UniRef50_C1XXS8 NADH dehydrogenase subunit M n=2 Tax=Meiothermus... 183 1e-44 UniRef50_D2QWL0 Proton-translocating NADH-quinone oxidoreductase... 182 3e-44 UniRef50_Q9B6D6 NADH-ubiquinone oxidoreductase chain 4 n=4 Tax=S... 181 4e-44 UniRef50_B3DZT1 NADH dehydrogenase subunit M n=1 Tax=Methylacidi... 181 6e-44 UniRef50_B4CV23 Proton-translocating NADH-quinone oxidoreductase... 180 9e-44 UniRef50_Q6L0I8 NADH-quinone oxidoreductase chain M n=1 Tax=Picr... 179 2e-43 UniRef50_B5IHV8 Proton-translocating NADH-quinone oxidoreductase... 179 2e-43 UniRef50_B5YL24 NADH-quinone oxidoreductase chain m, putative n=... 179 2e-43 UniRef50_Q56228 NADH-quinone oxidoreductase subunit 13 n=3 Tax=T... 177 1e-42 UniRef50_A6TVL4 NADH dehydrogenase (Quinone) n=2 Tax=Alkaliphilu... 176 1e-42 UniRef50_A6YHK2 NADH-ubiquinone oxidoreductase chain 4 n=3 Tax=H... 176 2e-42 UniRef50_Q979N1 NADH dehydrogenase I chain K n=2 Tax=Thermoplasm... 176 3e-42 UniRef50_C6NSN3 NADH dehydrogenase I, M subunit n=1 Tax=Acidithi... 172 4e-41 UniRef50_P03905 NADH-ubiquinone oxidoreductase chain 4 n=7832 Ta... 171 5e-41 UniRef50_A8A9X5 Proton-translocating NADH-quinone oxidoreductase... 164 1e-38 UniRef50_Q12ZH4 Na+/H+ antiporter subunit n=2 Tax=Methanosarcina... 162 3e-38 UniRef50_Q34949 NADH-ubiquinone oxidoreductase chain 4 n=5 Tax=L... 162 4e-38 UniRef50_C4NCD8 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=C... 160 1e-37 UniRef50_A9A3Z6 Proton-translocating NADH-quinone oxidoreductase... 159 3e-37 UniRef50_Q9B509 NADH-ubiquinone oxidoreductase chain 4 n=2 Tax=A... 159 3e-37 UniRef50_Q3KRR8 NADH-ubiquinone oxidoreductase chain 4 n=47 Tax=... 157 1e-36 UniRef50_P20113 NADH-ubiquinone oxidoreductase chain 4 n=8 Tax=C... 157 1e-36 UniRef50_Q60BG3 Putative NADH ubiquinone/plastoquinone complex s... 156 2e-36 UniRef50_A0EYN0 NADH-ubiquinone oxidoreductase chain 4 n=2 Tax=X... 156 2e-36 UniRef50_B1Q0F9 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=M... 155 4e-36 UniRef50_Q34048 NADH-ubiquinone oxidoreductase chain 4 n=219 Tax... 154 5e-36 UniRef50_Q8WB13 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=C... 154 6e-36 UniRef50_D1JBE4 Putative NADH-quinone oxidoreductase, subunit M ... 154 8e-36 UniRef50_C1KRK0 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=T... 154 1e-35 UniRef50_B2CKE1 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=P... 153 1e-35 UniRef50_Q6PYA2 NADH-ubiquinone oxidoreductase chain 4 n=3 Tax=A... 153 2e-35 UniRef50_P55781 NADH-ubiquinone oxidoreductase chain 4 n=1187 Ta... 153 2e-35 UniRef50_O79421 NADH-ubiquinone oxidoreductase chain 4 n=27 Tax=... 152 2e-35 UniRef50_B2A3T0 NADH dehydrogenase (Quinone) n=2 Tax=Clostridia ... 152 2e-35 UniRef50_P48917 NADH-ubiquinone oxidoreductase chain 4 n=5 Tax=E... 152 2e-35 UniRef50_Q94R72 NADH-ubiquinone oxidoreductase chain 4 (Fragment... 152 3e-35 UniRef50_Q9T7K5 NADH-ubiquinone oxidoreductase chain 4 n=11 Tax=... 151 7e-35 UniRef50_B5GCR5 NADH dehydrogenase subunit NuoM2 n=5 Tax=Strepto... 150 8e-35 UniRef50_Q3JBP6 Proton-translocating NADH-quinone oxidoreductase... 150 1e-34 UniRef50_P12775 NADH-ubiquinone oxidoreductase chain 4 n=29 Tax=... 150 1e-34 UniRef50_C5CEV1 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Ta... 149 2e-34 UniRef50_Q06SA1 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=A... 148 4e-34 UniRef50_A7E1Q2 NADH-ubiquinone oxidoreductase chain 4 n=2 Tax=P... 148 4e-34 UniRef50_A9LI69 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=N... 147 8e-34 UniRef50_O99825 NADH-ubiquinone oxidoreductase chain 4 n=3 Tax=I... 147 9e-34 UniRef50_C7DIL9 Proton-translocating NADH-quinone oxidoreductase... 147 1e-33 UniRef50_Q9ZY24 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=P... 147 1e-33 UniRef50_B2A694 NADH dehydrogenase (Quinone) n=1 Tax=Natranaerob... 147 1e-33 UniRef50_A1YWB8 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=C... 146 2e-33 UniRef50_B5T2Z3 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=N... 146 2e-33 UniRef50_Q2ABJ4 NADH-ubiquinone oxidoreductase chain 4 n=17 Tax=... 146 2e-33 UniRef50_Q71S52 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=O... 145 2e-33 UniRef50_Q642W5 NADH-ubiquinone oxidoreductase chain 4 n=6 Tax=P... 145 4e-33 UniRef50_D1FMY6 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=W... 145 4e-33 UniRef50_B3TJZ1 NADH-ubiquinone oxidoreductase chain 4 n=2 Tax=P... 145 4e-33 UniRef50_Q0H2F4 NADH-ubiquinone oxidoreductase chain 4 n=5 Tax=E... 144 6e-33 UniRef50_A6MVM1 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=M... 144 6e-33 UniRef50_B1L375 NADH:ubiquinone oxidoreductase subunit 4 (Chain ... 144 8e-33 UniRef50_P18931 NADH-ubiquinone oxidoreductase chain 4 n=322 Tax... 143 2e-32 UniRef50_B0K5U2 NADH dehydrogenase (Quinone) n=6 Tax=Thermoanaer... 142 3e-32 UniRef50_B1B1X6 NADH-ubiquinone oxidoreductase chain 4 n=2 Tax=L... 142 3e-32 UniRef50_A2CL32 NADH-ubiquinone oxidoreductase chain 4 n=27 Tax=... 142 4e-32 UniRef50_Q3AB32 Carbon monoxide-induced hydrogenase, membrane an... 141 5e-32 UniRef50_C1TKY1 Formate hydrogenlyase subunit 3/multisubunit Na+... 141 5e-32 UniRef50_A9X4I8 NADH-ubiquinone oxidoreductase chain 4 n=20 Tax=... 140 1e-31 UniRef50_Q6UKF6 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=P... 139 2e-31 UniRef50_Q9G2W9 NADH-ubiquinone oxidoreductase chain 4 n=193 Tax... 139 2e-31 >UniRef50_P0AFE9 NADH-quinone oxidoreductase subunit M n=205 Tax=Gammaproteobacteria RepID=NUOM_ECO57 Length = 509 Score = 1014 bits (2622), Expect = 0.0, Method: Compositional matrix adjust. Identities = 509/509 (100%), Positives = 509/509 (100%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI Sbjct: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL Sbjct: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA Sbjct: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL Sbjct: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY Sbjct: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG Sbjct: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV Sbjct: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF Sbjct: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 Query: 481 YPQPILDTSHSAIGNIQQWFVNSVTTTRP 509 YPQPILDTSHSAIGNIQQWFVNSVTTTRP Sbjct: 481 YPQPILDTSHSAIGNIQQWFVNSVTTTRP 509 >UniRef50_Q9I0J0 NADH-quinone oxidoreductase subunit M n=15 Tax=Bacteria RepID=NUOM_PSEAE Length = 509 Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust. Identities = 371/508 (73%), Positives = 434/508 (85%), Gaps = 5/508 (0%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQS-AG 59 M+LPWLILIPFIGGFLCW E +PRWIAL++M L L LSL +W G + L + G Sbjct: 1 MILPWLILIPFIGGFLCWIAEHSSKTLPRWIALLSMTLVLILSLWIWATGDFQLAPAPGG 60 Query: 60 IPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLN 119 P+W +F + WI R GISIHLA+DGLSLLMV LTGLLGVL+VLCSW EI++ GFFHLN Sbjct: 61 EPEWTLQFKVLWIERLGISIHLAMDGLSLLMVALTGLLGVLSVLCSWNEIQRRIGFFHLN 120 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGK-TRITAATKFFIYT 178 L+WILGGVIGVFLAID+FLFFFFWEMMLVPMYFLIALWGH + DGK TRI AATKFFI+T Sbjct: 121 LLWILGGVIGVFLAIDLFLFFFFWEMMLVPMYFLIALWGHSSDDGKKTRIYAATKFFIFT 180 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 QASGLVML+AIL LVFV++NATGV TF+Y LL T +S VE+LLMLGFF+AFAVKMPVV Sbjct: 181 QASGLVMLVAILGLVFVNFNATGVITFDYATLLKTQLSPHVEWLLMLGFFVAFAVKMPVV 240 Query: 239 PLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 P+H WLPDAH+QAPTAGSVDLAGILLKTAAYGL+RF+LPLFPNASAEFAPIAMWLG+IGI Sbjct: 241 PVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFALPLFPNASAEFAPIAMWLGIIGI 300 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFIL 358 FYGA ++FAQTDIKRL+AY+SVSHMGFV+I IY+GSQ+A QG V+QMIAHGLSAA LFIL Sbjct: 301 FYGALLSFAQTDIKRLVAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFIL 360 Query: 359 CGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVV 418 CGQLYER+HTRDMR MGGLWS+M +LPA+SLFFA A+LG+PGTGNFVGEF+IL G+F+VV Sbjct: 361 CGQLYERLHTRDMRKMGGLWSRMPYLPAISLFFASASLGLPGTGNFVGEFLILIGAFKVV 420 Query: 419 PVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLL 478 PVI VI+TFGLVFASVYSL M+HRAYFG ++S + + G+ REL M+L L VLLVLL Sbjct: 421 PVIIVIATFGLVFASVYSLIMIHRAYFGPSQSD---EPILGLDARELSMVLGLAVLLVLL 477 Query: 479 GFYPQPILDTSHSAIGNIQQWFVNSVTT 506 G YPQP+LD S +++ +QQW +++T Sbjct: 478 GVYPQPVLDISAASMHGVQQWLGAALST 505 >UniRef50_A4XV13 Proton-translocating NADH-quinone oxidoreductase, chain M n=10 Tax=Proteobacteria RepID=A4XV13_PSEMY Length = 509 Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust. Identities = 368/506 (72%), Positives = 427/506 (84%), Gaps = 4/506 (0%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSA-G 59 M+LPWLILIPFIGG LCWQ ERFG +PRW+ALITMGL L L L LW G ++L + G Sbjct: 1 MILPWLILIPFIGGLLCWQGERFGHVLPRWLALITMGLLLGLGLWLWASGDFTLAPAPDG 60 Query: 60 IPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLN 119 P+W EF + WIPR GI+IHLA+DGLS+LMVVLTGLLGVL+VLCSW EI+ GFFHLN Sbjct: 61 GPRWAHEFVIDWIPRLGITIHLAMDGLSVLMVVLTGLLGVLSVLCSWNEIQHRVGFFHLN 120 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 LMWILGGV+GVFLA+D+FLFFFFWEMMLVPMYFLIALWGH SDG+TRITAATKFFI+TQ Sbjct: 121 LMWILGGVVGVFLAVDLFLFFFFWEMMLVPMYFLIALWGHSGSDGRTRITAATKFFIFTQ 180 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 ASGL+ML+AILALV VH+N TGV TFNY +LL T ++ G EYLLMLGFFIAFAVK PVVP Sbjct: 181 ASGLIMLVAILALVLVHFNQTGVLTFNYADLLQTELAPGTEYLLMLGFFIAFAVKFPVVP 240 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 +H WLPDAH+QAPTAGSVDLAGILLKTAAYGLLRF+LPLFPNASAEFAPIA WLGV I Sbjct: 241 VHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAPIAQWLGVFAII 300 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 YGA ++FAQTDIKRL+AY+SVSHMGFVLIAIY+GSQ+A QGAV+QM+AHGLSAA LFILC Sbjct: 301 YGALLSFAQTDIKRLVAYSSVSHMGFVLIAIYSGSQIALQGAVVQMVAHGLSAAALFILC 360 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP 419 GQLYER+HTRD+R MGG+W++M WLPA+SLFFA A LG+PGTGNFVGEF+IL GSF P Sbjct: 361 GQLYERLHTRDLRQMGGIWARMPWLPAISLFFAAAALGLPGTGNFVGEFLILIGSFPGAP 420 Query: 420 VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLG 479 + VI+ GLV SVY+LAM+HRAYFG + LPG+ REL M+L L VLL+LLG Sbjct: 421 WVVVIAATGLVLGSVYALAMIHRAYFGPVQQD---APLPGLKPRELSMVLGLAVLLILLG 477 Query: 480 FYPQPILDTSHSAIGNIQQWFVNSVT 505 YPQP+LDTS +++ +QQW +++ Sbjct: 478 VYPQPVLDTSAASMHGVQQWMADALN 503 >UniRef50_D2U4G9 NADH-quinone oxidoreductase chain M n=1 Tax=Arsenophonus nasoniae RepID=D2U4G9_9ENTR Length = 506 Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust. Identities = 335/509 (65%), Positives = 414/509 (81%), Gaps = 3/509 (0%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 MLLPWLIL+PFIGG LCWQ+ RF + PR++AL+ MGLTL LS+ LWLQG YSLT + + Sbjct: 1 MLLPWLILLPFIGGVLCWQSGRFNQRAPRYLALLVMGLTLLLSVLLWLQGNYSLTNTLAL 60 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 PQWQ+ F MPWI GI+I LAIDGLSLLM+VLT ++G+ +VL SW E + QG +H +L Sbjct: 61 PQWQAIFFMPWITPLGINIALAIDGLSLLMIVLTAIMGIFSVLSSWSENQPNQGAYHFHL 120 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 MWIL GV+G+FLA+D+FLFFFFWEMML+PMYFLIA WGHK S+ + + AATKFFIYTQA Sbjct: 121 MWILAGVMGIFLAVDLFLFFFFWEMMLIPMYFLIANWGHKGSEERAHVNAATKFFIYTQA 180 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 SGL+ML+AI+AL +HY ++G W+F Y +LLNT MS+ +YLLMLGFFIAFAVKMP+VP Sbjct: 181 SGLIMLVAIVALALIHYQSSGNWSFAYHDLLNTKMSALTQYLLMLGFFIAFAVKMPLVPF 240 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 HGW+ D Q+PTAGSVD++GI+LKTAAYGLLRF+LPLFP AS +F PIAM LGVI IFY Sbjct: 241 HGWMADTQEQSPTAGSVDISGIMLKTAAYGLLRFTLPLFPTASIQFTPIAMTLGVISIFY 300 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 GAW+AF QTDIKRL+AY+S+SHMGFV +AIY GS LAYQGAV+QMIA+GLS A L I+ G Sbjct: 301 GAWLAFKQTDIKRLVAYSSLSHMGFVTVAIYAGSTLAYQGAVLQMIANGLSGAALIIISG 360 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 QLYER TRDMRMMGGLW ++ WLPALSLFFAVATLGMPGTGNFVGEFMILFG+F + Sbjct: 361 QLYERTGTRDMRMMGGLWKRIMWLPALSLFFAVATLGMPGTGNFVGEFMILFGTFGQFKL 420 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 +T I FG+VFAS+Y+L M+ + Y+G AKS+ A LP ++ RE+ ++L L +LLV+LGF Sbjct: 421 VTTIMVFGVVFASIYALWMMQQVYYGSAKSEKA---LPALNGREILVLLTLALLLVILGF 477 Query: 481 YPQPILDTSHSAIGNIQQWFVNSVTTTRP 509 YPQP+LDTS + + ++ + S +T RP Sbjct: 478 YPQPVLDTSKNVMESLHSLYSISFSTLRP 506 >UniRef50_Q7VRW3 NADH dehydrogenase I chain M n=2 Tax=Gammaproteobacteria RepID=Q7VRW3_BLOFL Length = 509 Score = 560 bits (1444), Expect = e-158, Method: Compositional matrix adjust. Identities = 271/506 (53%), Positives = 372/506 (73%), Gaps = 12/506 (2%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWL-QGGY------- 52 MLLP LIL+PF G + WQ++R V +PRWIAL + + LWL + GY Sbjct: 1 MLLPTLILVPFFVGIISWQSDRINVCMPRWIALFGSSMVFVVGFFLWLWRMGYCNNLVLD 60 Query: 53 SLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKE--IE 110 +L + W E+ WIPRFGI+ HLA+DGLS+LM++LTG+LGV+AVL SW+ + Sbjct: 61 NLLKLNKSSVWDLEYMCTWIPRFGINFHLALDGLSVLMLMLTGILGVMAVLSSWENSVTD 120 Query: 111 KYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITA 170 ++G F+ NL+WILG VIGV LA+DMFLFFFFWE++L+P+YFLI++WG++ + K RI A Sbjct: 121 HHKGLFYCNLLWILGSVIGVILAVDMFLFFFFWEIVLIPIYFLISIWGYEELNKKLRIIA 180 Query: 171 ATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIA 230 ATKF +Y Q SGL MLI+I+ LV+ +Y G+W+F+YE LL+ + +EY LMLGFF A Sbjct: 181 ATKFCLYAQLSGLCMLISIIILVYFNYRLYGIWSFDYENLLHVTLPKNIEYFLMLGFFCA 240 Query: 231 FAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIA 290 FA+KMP+VP H W +A++ +P GSVDL G L+K + YG RF LPL PNAS EF PIA Sbjct: 241 FAIKMPIVPFHTWSLEAYAYSPITGSVDLIGFLVKISIYGFFRFVLPLCPNASKEFVPIA 300 Query: 291 MWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGL 350 M+LG++ IFYGAWMAFAQTD KRLIAY+++SHMGF LIAIY+ QL+YQG ++QMI+ L Sbjct: 301 MFLGILNIFYGAWMAFAQTDFKRLIAYSNISHMGFALIAIYSNDQLSYQGVLVQMISCSL 360 Query: 351 SAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMI 410 + +G+ ILCGQLY+R++TR++ +MGGLW +M +PA L F V+ L +PGTGNF+GE I Sbjct: 361 TLSGMCILCGQLYKRLYTRNITVMGGLWGRMNLMPAFFLCFIVSMLSIPGTGNFIGEVTI 420 Query: 411 LFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILL 470 L GSF VP+IT+I++FG++FAS+YSL ++ R Y+G KSQI+ + L M+ E F+I++ Sbjct: 421 LLGSFHTVPIITIIASFGILFASIYSLVLMQRIYYG--KSQISCEILLDMTFLEKFIIIV 478 Query: 471 LVVLLVLLGFYPQPILDTSHSAIGNI 496 L++ ++++G +PQ I DTS I NI Sbjct: 479 LLLCVLIVGCFPQFIFDTSRETIRNI 504 >UniRef50_P57263 NADH-quinone oxidoreductase subunit M n=4 Tax=Buchnera aphidicola RepID=NUOM_BUCAI Length = 505 Score = 528 bits (1361), Expect = e-148, Method: Compositional matrix adjust. Identities = 254/508 (50%), Positives = 373/508 (73%), Gaps = 4/508 (0%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 MLL LI+IPF+ F + + R PRWIAL + TL + +Q++ Q Y + Q Sbjct: 1 MLLSLLIIIPFLSSFFSFFSPRLHNNFPRWIALSGIIATLLVVIQIFFQENYHIFQIRHY 60 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 P W + +PWI RFGI ++A+DGLS++M++ + L ++A++CSW EI+K +GFF+ N Sbjct: 61 PNWNCQLIVPWISRFGIEFNIALDGLSIIMLIFSSFLSIIAIICSWNEIKKNEGFFYFNF 120 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 M + G+IGVF++ D+FLFF FWE+ML+PMYFLIALW K ++ K AA KFF+Y+Q Sbjct: 121 MLVFTGIIGVFISCDLFLFFCFWEIMLIPMYFLIALWSDK-TEKKKNFLAANKFFLYSQT 179 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 SGL++L +IL LVF HY +T + TFNY L+N P++ VEY++M+GFF++FA+KMP+VP Sbjct: 180 SGLILLSSILLLVFSHYYSTNILTFNYNLLINKPINIYVEYIVMIGFFLSFAIKMPIVPF 239 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 HGWLPD HS++ + GSV++ G+LLKTA Y LLR++L LFP+++ F+ IA++ G+I IFY Sbjct: 240 HGWLPDIHSRSLSCGSVEIIGVLLKTAPYALLRYNLVLFPDSTKSFSLIAVFWGIISIFY 299 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 GAW+AF+QT+IKRLIAY+SVSHMG +LI IY+ ++ A QG VIQM+++ L+ A L IL G Sbjct: 300 GAWIAFSQTNIKRLIAYSSVSHMGLILIGIYSNNERALQGVVIQMLSNSLTVAALCILSG 359 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 Q+Y+R T+DM MGGLWS + W+P SLFF++A LG+PGTGNF+GEF+IL G F+V P+ Sbjct: 360 QIYKRFKTQDMSKMGGLWSCIYWIPGFSLFFSLANLGVPGTGNFIGEFLILSGVFEVFPL 419 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 +++++T G+VF+S+YSL ++ + ++G K I ++ ++ +E++ I+ LV LV LG Sbjct: 420 VSILATIGIVFSSIYSLNVIQKIFYGPCKQNI---KVFFINKQEVWTIIALVFTLVFLGL 476 Query: 481 YPQPILDTSHSAIGNIQQWFVNSVTTTR 508 PQ I+D S+++I NIQ+ F NS+ R Sbjct: 477 NPQKIIDVSYNSIHNIQKEFNNSILKIR 504 >UniRef50_Q89AT5 NADH-quinone oxidoreductase subunit M n=2 Tax=cellular organisms RepID=NUOM_BUCBP Length = 508 Score = 460 bits (1184), Expect = e-128, Method: Compositional matrix adjust. Identities = 234/506 (46%), Positives = 348/506 (68%), Gaps = 4/506 (0%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 MLLP L+ IPF GGFLC + K+ ++AL +M L LSL L + S Sbjct: 1 MLLPMLVSIPFFGGFLCLLFNQKNAKISYYLALTSMALVFILSLILLFNTINVIVSSISN 60 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 W E+ +PWI +FGIS HLA+D LS+LM+ LT +LG+++V CSWK+++K G F+ L Sbjct: 61 SSWSFEYIVPWIEKFGISFHLAVDRLSILMLNLTSILGLVSVFCSWKKVQKNIGLFYFGL 120 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGK---TRITAATKFFIY 177 +W LG +IG+F+++D+FLFF FWE+ ++P YFL+ +WG+K +D K I +A KFFIY Sbjct: 121 LWTLGSIIGIFISVDLFLFFCFWELSVLPTYFLMIMWGYKDNDRKFYYNNIFSANKFFIY 180 Query: 178 TQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPV 237 +Q SGLV+L++ L LV+ HY + TF+Y+ L +T M+ +E +MLGFF+AFA+K+P+ Sbjct: 181 SQISGLVLLLSTLVLVYTHYIYDHILTFDYDVLKHTSMNIVLESCIMLGFFLAFAIKIPI 240 Query: 238 VPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 VP H WLPD H +P G VD++GILLKT+ Y L+RF++PLFP+++ F+ I M+ G+I Sbjct: 241 VPFHSWLPDFHCYSPVIGVVDISGILLKTSIYALMRFNIPLFPHSTEIFSSIIMFFGIIT 300 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 IFYGA ++ Q +IKR IAY S+SHMGF+LIAIY+ +Q+AYQGA+IQ+I++ LS A LF+ Sbjct: 301 IFYGAIVSLFQNNIKRFIAYVSISHMGFILIAIYSINQVAYQGAIIQLISYSLSTAALFL 360 Query: 358 LCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV 417 L G +++ I T D+ MGGLWSK++W+P L F++ LG+PGTGNFVGEFMI G F Sbjct: 361 LSGHVFKSISTFDIDKMGGLWSKLRWIPGFLLIFSIINLGVPGTGNFVGEFMIFMGCFNS 420 Query: 418 VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIAS-QELPGMSLRELFMILLLVVLLV 476 +I ++S F L+ ++ SL + + FG ++ +L M++ + + + L+VL++ Sbjct: 421 HLMIVILSIFSLILLALCSLMFVQKICFGPINNRYDFLCDLNVMTICDFLIFVFLLVLIL 480 Query: 477 LLGFYPQPILDTSHSAIGNIQQWFVN 502 ++G YP I+D S+S + +I+ F N Sbjct: 481 IIGLYPNIIIDVSYSPLCSIRNIFSN 506 >UniRef50_B1KJV9 Proton-translocating NADH-quinone oxidoreductase, chain M n=2 Tax=Shewanella RepID=B1KJV9_SHEWM Length = 537 Score = 436 bits (1122), Expect = e-121, Method: Compositional matrix adjust. Identities = 233/529 (44%), Positives = 344/529 (65%), Gaps = 44/529 (8%) Query: 1 MLLPWLILIPFIGGFL-CWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAG 59 M+L L+++P IGGFL CW ++R P+WIA I +TLA + + L Sbjct: 1 MMLLTLVILPLIGGFLACW-SQRVHQDAPKWIAAICTLVTLAFLISIKLASNIE-----D 54 Query: 60 IPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLN 119 + W + WIPR I+ HLA+DGLS ++++LT L+G++ + +W EI +++GFF+ N Sbjct: 55 LELWLVDEPRAWIPRLNITAHLAMDGLSFVLLLLTLLMGLVGLSSAWSEINQHRGFFYGN 114 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 +W L G+IGVFLA+D+ LFF FWE+MLVPMYFLIA+WG++ R AA KFF++TQ Sbjct: 115 YLWTLAGIIGVFLAMDLLLFFVFWEVMLVPMYFLIAIWGNE-----NRRYAALKFFLFTQ 169 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 A GL+ML++I+AL +HY TG+ +F+Y+ L+ +P+ S + + LGF IAF VK+P P Sbjct: 170 AGGLLMLLSIIALTVIHYQQTGILSFDYQVLVQSPIQSELAKWICLGFIIAFIVKLPAFP 229 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 H WLPDAH+QAPT S+ LA +LLKT YGLLRF LPLFP ++ +AP+ M L + I Sbjct: 230 FHTWLPDAHTQAPTPASIILAAVLLKTGGYGLLRFVLPLFPESAQFWAPLMMALAGVSII 289 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 YGA MAF+QTD+KRL+AY+SVSHMGFVL+ ++ + A QGAV+QM+AHGLS + LF+L Sbjct: 290 YGAIMAFSQTDLKRLVAYSSVSHMGFVLLGCFSFNFYALQGAVMQMLAHGLSTSALFMLV 349 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP 419 G + R HTRD+ +GGLW + L A+ LFF VA+LGMPG GNF+ E ++L G+F+ P Sbjct: 350 GLIQHRFHTRDLNHLGGLWHTLPKLSAMGLFFGVASLGMPGMGNFIAELLVLLGTFKQAP 409 Query: 420 VITVISTFGLVFASVYSLAMLHRAYFG--------------------------------K 447 + ++++ GL+ A+VYSL M+ +++FG K Sbjct: 410 IFAIVASSGLILAAVYSLRMIQKSFFGMNLKLETSLSDEKSSDNSSRDGIDNSSADLGAK 469 Query: 448 AKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNI 496 S ++ + +S++E ++L+ + L+++G +PQPI +S++ I Sbjct: 470 HHSDAHTRYVTDLSVKEGLTLMLMCLGLIVMGLHPQPIFTLVNSSLMEI 518 >UniRef50_Q39ZA6 Proton-translocating NADH-quinone oxidoreductase, chain M n=7 Tax=Geobacter RepID=Q39ZA6_GEOMG Length = 496 Score = 346 bits (888), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 182/420 (43%), Positives = 267/420 (63%), Gaps = 8/420 (1%) Query: 68 DMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGV 127 D WI RFGI L +DG+SLLMV LT + V+A+ SW+ + + + ++ + G+ Sbjct: 71 DAVWIERFGIRYLLGMDGISLLMVALTAFITVVAMAVSWRAVTERTALHYFLILLMESGL 130 Query: 128 IGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLI 187 +GVFLA+D+ LF+ FWE+ML+PM+FLI +WGH RI +A KFF+YT A L+ML+ Sbjct: 131 MGVFLALDLVLFYLFWEVMLIPMFFLIGIWGHG-----RRIYSAVKFFLYTLAGSLLMLL 185 Query: 188 AILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDA 247 AI+ + +H +ATG++TF L P++ L F +AFA+K P+ P+H WLPDA Sbjct: 186 AIIGVYLIHGDATGIYTFTLPLLAKAPIAHAAAPWLFGAFLLAFAIKFPLFPVHTWLPDA 245 Query: 248 HSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFA 307 H+ APTAGSV LA +LLKT AYGL+RF PLFP A+ F P L V+GI Y +W+A+A Sbjct: 246 HTDAPTAGSVILAALLLKTGAYGLVRFGYPLFPEAAKGFTPFISALAVVGILYASWVAYA 305 Query: 308 QTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIH 367 Q D+KR++AY+SV HMGFV + I + S +A G+++QM+ HG++ LF L G L ER Sbjct: 306 QEDMKRMVAYSSVGHMGFVALGIASWSPVALSGSILQMVNHGVTTGALFALVGMLDERTD 365 Query: 368 TRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTF 427 TR++ GG+W K L L FA+ + G+PG NF GEF+IL G F+ P I+ Sbjct: 366 TREIAAYGGVWGKAPKLAFFFLLFAMTSAGLPGLNNFTGEFLILAGVFRTTPAAAAIAFI 425 Query: 428 GLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILD 487 G+V +Y++ ++ F + + LP ++LRE ++ +L + V +G +P+P+LD Sbjct: 426 GIVLPLIYTVRLVQEVLFQTERRPL---RLPDVTLREEALLAVLATIDVYIGVHPKPLLD 482 >UniRef50_Q2IN04 Proton-translocating NADH-quinone oxidoreductase, chain M n=6 Tax=Bacteria RepID=Q2IN04_ANADE Length = 542 Score = 336 bits (862), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 197/504 (39%), Positives = 304/504 (60%), Gaps = 20/504 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL + +P +G R R +AL+ +T ALSL LW + S G P Sbjct: 3 LLTVVTFLPLLGALAMVLVPRDEPSQHRALALVVSLVTFALSLGLW----FGFDASPGAP 58 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 ++Q E +PW+P GI H+ +DG++LL+ +LT +L + VL +WK + F + L+ Sbjct: 59 EFQFELMIPWMPTIGIGFHVGLDGVALLLFMLTTVLMPVVVLSAWKAVGDRVKEFMIALL 118 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + ++G F+A+D+ LF+ FWE ML+PMY LI +WG + R+ A KFF+YT A+ Sbjct: 119 VLESAMLGTFIALDLVLFYVFWEAMLIPMYLLIGIWG-----SQNRLYATVKFFVYTFAA 173 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNT-PMSSGVEYLLMLGFFIAFAVKMPVVPL 240 ++ML+AIL +V+++ G TF+Y E ++ G L L F +AFAVK+P+ PL Sbjct: 174 SVLMLLAIL---YVYFHDGG--TFDYVEARRALAVTPGAASWLFLAFALAFAVKVPMFPL 228 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H WLPDAH++APTAGSV LAG+LLK +G R++LPLFP A+ + + L VIGI Y Sbjct: 229 HTWLPDAHTEAPTAGSVILAGVLLKMGTFGFFRYALPLFPEAALQHRNLVAVLAVIGIIY 288 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 GA M+ QTD+KRL+AY+SVSH+GFV++ + S G+V QM+ HG+S LF+L G Sbjct: 289 GALMSLVQTDMKRLVAYSSVSHLGFVMLGLMALSAEGMTGSVYQMLNHGVSTGALFLLVG 348 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGS----FQ 416 LYER HTR + GG+ ++ + A + ++++G+PGT FVGEF+IL G+ Sbjct: 349 MLYERRHTRLISEYGGIAKRVPVIAAAFVIVTLSSIGLPGTNGFVGEFLILSGTWLSRLG 408 Query: 417 VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLV 476 V ++ G++ +VY L ++ + +FG ++ A+ LP +S+RE F++ ++ L+V Sbjct: 409 GSAVFATVAALGVILGAVYMLLLVEKVFFGPNQNA-ANHHLPDLSVREGFVLAPMIALIV 467 Query: 477 LLGFYPQPILDTSHSAIGNIQQWF 500 ++G P P L + A+ + Q F Sbjct: 468 VMGLLPGPFLAPAKPAVDRLIQRF 491 >UniRef50_A4WT79 Proton-translocating NADH-quinone oxidoreductase, chain M n=10 Tax=Alphaproteobacteria RepID=A4WT79_RHOS5 Length = 486 Score = 333 bits (855), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 206/494 (41%), Positives = 288/494 (58%), Gaps = 23/494 (4%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 M L LIL+PF GG R+G RW+A+ +GL L + + + S G Sbjct: 5 MELTALILLPFFGGIAALFAGRWGRDAERWVAIAALGLALLILISSFF--------SDGD 56 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 +W + W P G+ + LA+DGLS ++V++ LG+++V+ SWK I +Y G + L Sbjct: 57 GRWIAIERYDWAPSLGLQVILAMDGLSGALLVVSLALGIVSVIVSWK-ITEYSGLLNAAL 115 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 +W + GVFL+ D+ +F FFWE+MLVP + LI++WGH R AA KF ++ Sbjct: 116 LWTVAASNGVFLSFDLLVFAFFWELMLVPSFLLISVWGHG-----DREAAALKFLVFNAV 170 Query: 181 SGLVMLIAILALVFVHYNATG-VWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 +GL +L A+ + ATG TF+ E+ + GV+ LL+LGF AF VK+PV P Sbjct: 171 AGLGLLAAVF-----YLGATGDTVTFDAFEVAERQIPHGVQVLLLLGFAAAFLVKLPVPP 225 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 LH WLPDAH+QAPTAGS+ LAG+LLKT AYGL RF LFP A AP + LG G Sbjct: 226 LHAWLPDAHTQAPTAGSILLAGLLLKTGAYGLFRFPPMLFPEGFATLAPFGLALGAFGSI 285 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 YGA +A QTD KRL+AYTSV+HM VL+ I G + GA ++M+AH SA+ LF+L Sbjct: 286 YGALLACGQTDAKRLVAYTSVAHMSIVLMGICGGVYFSLMGAGVEMVAHAFSASALFLLI 345 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP 419 G LY+R TRD+R +GGL A F A L MPGT NF+GE +++ G FQV Sbjct: 346 GALYDRTGTRDLRELGGLQQNAPRFAAAFAVFFSAALAMPGTANFLGEALVITGMFQVNW 405 Query: 420 VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLG 479 + I+ LV + VY+ + R FGK++ ++ L ++LRE+ I+LL V +L G Sbjct: 406 IFASITLISLVISVVYATRLFKRVVFGKSRR---TEALEDLTLREMGPIVLLAVATLLFG 462 Query: 480 FYPQPILDTSHSAI 493 PQ ++ A+ Sbjct: 463 MLPQLLMGALEGAV 476 >UniRef50_UPI0001910235 NADH dehydrogenase subunit M n=2 Tax=Salmonella enterica subsp. enterica serovar Typhi RepID=UPI0001910235 Length = 184 Score = 333 bits (855), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 174/184 (94%), Positives = 181/184 (98%) Query: 326 VLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLP 385 +LIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYER+HTRDMRMMGGLW KMKWLP Sbjct: 1 MLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERLHTRDMRMMGGLWGKMKWLP 60 Query: 386 ALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYF 445 ALS+FFAVATLGMPGTGNFVGEFMILFGS+QVVP+ITVISTFGLVFASVYSLAMLHRAYF Sbjct: 61 ALSMFFAVATLGMPGTGNFVGEFMILFGSYQVVPMITVISTFGLVFASVYSLAMLHRAYF 120 Query: 446 GKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNSVT 505 GKAKSQIASQEL GMSLRELF+ILLLVVLLVLLGFYPQPILDTSHSA+ NIQQWFVNSVT Sbjct: 121 GKAKSQIASQELLGMSLRELFIILLLVVLLVLLGFYPQPILDTSHSAMSNIQQWFVNSVT 180 Query: 506 TTRP 509 TTRP Sbjct: 181 TTRP 184 >UniRef50_C1AB27 NADH-quinone oxidoreductase chain M n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AB27_GEMAT Length = 512 Score = 331 bits (848), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 181/451 (40%), Positives = 275/451 (60%), Gaps = 18/451 (3%) Query: 64 QSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWI 123 Q +PWI +G+S + +DGL++L+V+LTG LG L VL +W IE+ FH+ ++ + Sbjct: 62 QFATTVPWIAEWGVSYAIGMDGLNVLLVLLTGFLGPLVVLGAWTAIERDVTMFHVMVLLL 121 Query: 124 LGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGL 183 ++G FLA D+FLF+ FWE ML+PM+ +I +WG G R A KF +YT + Sbjct: 122 QFAMMGAFLAQDLFLFYVFWEAMLIPMFLIIGIWG-----GARRSYATIKFVLYTAFGSI 176 Query: 184 VMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGW 243 +ML A++ LV NA GV +F + +L+ + V+ L+ F ++FA+K+P+VPLH W Sbjct: 177 LMLAALIYLVQSLQNAGGVASFAFTDLMQAQLPLDVQITLLAAFALSFAIKVPMVPLHTW 236 Query: 244 LPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAW 303 LPDAH +APT GSV LAG+LLK YG ++ PLFP+A+ F P+ M L V+ I YGA Sbjct: 237 LPDAHVEAPTPGSVILAGVLLKMGTYGFIKLGFPLFPDATRVFTPMLMTLSVVSIVYGAC 296 Query: 304 MAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLY 363 +A QTDIK++IAY+S+SH+G+V++ + + QGA+IQM++HGL AAGLF+L G +Y Sbjct: 297 LALVQTDIKKIIAYSSISHLGYVMLGLLSLDLAGIQGAIIQMVSHGLVAAGLFLLVGMVY 356 Query: 364 ERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSF-------- 415 ER HTR++ GGL ++ + F +A++G+P T F GEFM+L G+F Sbjct: 357 ERCHTRELSAYGGLARQIPVYAMFFIVFTLASVGLPTTSGFTGEFMVLLGAFNAAWPQHL 416 Query: 416 ---QVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLV 472 Q+ ++ V++ G+V ++Y L FG AK+ A L +SLRE ++ +L+ Sbjct: 417 DGNQLPLILAVVAVTGVVLGALYMLRFALTFLFGPAKAPHA--PLNDLSLRERSILAILM 474 Query: 473 VLLVLLGFYPQPILDTSHSAIGNIQQWFVNS 503 V + LG +P L + A Q ++ Sbjct: 475 VSIFALGLFPDGALQKTELAAKAFQSRMTST 505 >UniRef50_B0BZT1 Proton-translocating NAD(P)H-quinone oxidoreductase, chain M n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0BZT1_ACAM1 Length = 490 Score = 330 bits (846), Expect = 8e-89, Method: Compositional matrix adjust. Identities = 189/486 (38%), Positives = 288/486 (59%), Gaps = 18/486 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL +I P +G + + + +WI+L M + AL+ +LQ + Q+ Sbjct: 5 LLSLIIFSPLVGAVIILLLPKAQESLYKWISLANMVVVSALTFAAFLQ--FDPNQTG--- 59 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 +Q WIP+ + L DG+S MVVLT L+ LA + S+ I+K + ++ + Sbjct: 60 -FQLVEKTLWIPQLNVYYLLGTDGISFPMVVLTALISTLASIGSF-SIKKREKEYYCLYL 117 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 +++ G++G FLA+DM LF+ FWE++LVPMYFLI +WG G + AA KFF+YT A Sbjct: 118 FLVTGMMGTFLALDMILFYVFWEVVLVPMYFLIGIWG-----GPRKEYAAMKFFLYTFAG 172 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 L+ML+ IL + F + TFN EL+ S G + ++ L F+ FAVK+P P H Sbjct: 173 SLLMLVGILGMYF----NSAPHTFNIMELVAQDFSFGFQKIVFLALFVGFAVKVPTFPFH 228 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLPDAH +APT SV LAG+LLK YG RFS P+ P A+ F P L IGI YG Sbjct: 229 TWLPDAHVEAPTPISVILAGVLLKMGTYGFFRFSFPILPEAANWFRPYLAVLAAIGIVYG 288 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 ++A AQTD K+++AY+S+SHMGFVL+ + S + GA++QM +HG+ LF+L G Sbjct: 289 GFIALAQTDFKKMVAYSSISHMGFVLLGLAAFSTNGFNGAMLQMFSHGVITGALFLLVGV 348 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 +Y+R HTRDM GGL +++ +FF++A+LG+PG FV EF++L GS++ + Sbjct: 349 IYDRAHTRDMNAFGGLNAQLPVYSGFLVFFSLASLGLPGLSGFVSEFLVLLGSYEYSKLY 408 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 T + G++ A+ Y L M+ R G A + S LP +++RE+ ++ L+++ + +G Y Sbjct: 409 TAFACMGILLAACYLLFMVRRVLLGPANPKWES--LPDINMREVVTVVPLLIITLGIGIY 466 Query: 482 PQPILD 487 P+ +L Sbjct: 467 PRYLLS 472 >UniRef50_C4XMN2 NADH-quinone oxidoreductase chain M n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XMN2_DESMR Length = 493 Score = 324 bits (830), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 176/429 (41%), Positives = 263/429 (61%), Gaps = 8/429 (1%) Query: 68 DMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGV 127 D WIP FGI L++DGLSL+ VVLT L+G+ +L S + + +H ++ L V Sbjct: 65 DAAWIPSFGIRYSLSLDGLSLIFVVLTALIGLCCMLASRHDDRERPALYHGLILASLTTV 124 Query: 128 IGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLI 187 G+FLA D+FLF FWE L+P++FLI ++GH ++ A KFF+++ GL+M + Sbjct: 125 QGIFLASDVFLFALFWEAQLIPVFFLIGVFGHG-----DKLRVAMKFFLFSATGGLLMFL 179 Query: 188 AILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDA 247 A++AL + NA F E L + V L F ++FA+K+P+VP+H WLPDA Sbjct: 180 AVIALGVLSANAPDGPNFALEALTRLDIPQNVGRWLFAAFVLSFAIKIPLVPVHMWLPDA 239 Query: 248 HSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFA 307 H++APTAGS+ LAG+LLKT Y L+RF+LPLFP A+ FAP LG++G+FY + +A A Sbjct: 240 HTEAPTAGSLILAGLLLKTGGYALIRFALPLFPEAAHAFAPALTVLGLVGLFYASAVAVA 299 Query: 308 QTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIH 367 Q D+KRLIAY+S+ HMG + A+ +GS+LA GAV+ M++H L++ GLF L G + ER+ Sbjct: 300 QEDVKRLIAYSSIGHMGLAVAAMVSGSRLALGGAVLLMVSHALTSGGLFSLAGAIGERLG 359 Query: 368 TRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTF 427 +R ++GG+W+K A LF +A+ +PG FVGE MI+FG F+V + ++ Sbjct: 360 SRRFDILGGIWNKAPHFGAAFLFCVLASAALPGLSGFVGEAMIVFGLFKVNVLAAGLAVA 419 Query: 428 GLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILD 487 G+ VY L + +G +S + P + RE ++ LL V +V LG +P P+L Sbjct: 420 GMAATLVYLLRLARDVLYGPPRSAV---PFPDLDAREAVLLSLLAVGIVWLGLFPGPVLG 476 Query: 488 TSHSAIGNI 496 + + I Sbjct: 477 LAAEPLNAI 485 >UniRef50_A9B6Y1 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B6Y1_HERA2 Length = 517 Score = 323 bits (828), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 194/466 (41%), Positives = 286/466 (61%), Gaps = 25/466 (5%) Query: 52 YSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEK 111 ++ A Q+ F+ WIP +G+ L +DG+SL +V+LT + LA+ +W EK Sbjct: 56 FNFKHDAAGLQFYEYFN--WIPDWGVRYELGLDGISLWLVLLTTFVTPLAIWSAWNVEEK 113 Query: 112 YQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAA 171 F L L+ +G ++GVFLA D+FLF+ FWE L+PMYFLI +WG GK RI A Sbjct: 114 TNNFLMLILLQEMG-MLGVFLAQDLFLFYIFWEFTLIPMYFLIGMWG-----GKRRIYAT 167 Query: 172 TKFFIYTQASGLVMLIAILALVFVHYN---ATGVWT---FNYEELLNTPMSSGVE----Y 221 KFF+YT A+ + MLI I+AL ++Y G+ T F + L+ G+ Sbjct: 168 VKFFLYTFAASVFMLIGIIALGLLNYKYLAQQGLPTDTAFQVQTLMANINQFGLSDTELK 227 Query: 222 LLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPN 281 LL L FF+AFAVK+P+ P+H WLPDAH +APTAGSV LA +LLK YG++RF + LFP Sbjct: 228 LLFLSFFVAFAVKVPLWPVHTWLPDAHVEAPTAGSVILAAVLLKMGGYGMIRFCVQLFPQ 287 Query: 282 ASAEFA-PIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQG 340 + E+A PIA+ L VIGI YGA +++AQ+DIK+L+AY+SVSHMGF+++ I+ +++ QG Sbjct: 288 IAQEWARPIAL-LAVIGIIYGAVLSYAQSDIKKLVAYSSVSHMGFIVLGIFALNEVGLQG 346 Query: 341 AVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPG 400 AV+QMI HGLS LF+L G +YER HTR++ GGLW + LF +A++G+PG Sbjct: 347 AVLQMINHGLSTGALFLLIGMVYERTHTRELADYGGLWKVVPVFVYFLLFATMASVGLPG 406 Query: 401 TGNFVGEFMILFGSFQVVPV---ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQEL 457 FVGEF+I+ G+F P+ T + G++ A+VY L M G S+ + L Sbjct: 407 LNGFVGEFLIMLGAFD-SPIGWTFTAFAAVGVILAAVYLLKMFQGIASGPF-SERRTPHL 464 Query: 458 PGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNS 503 ++ RE+ ++L L +L++++G Y + I ++ + N+ Sbjct: 465 SDLTRREVAILLPLCILMLVIGLYSSYFTRPMETTIKALEAFVANA 510 >UniRef50_A6FCN8 NuoM2 NADH-Ubiquinone/plastoquinone (Complex I) oxidoreductase n=2 Tax=Proteobacteria RepID=A6FCN8_9GAMM Length = 500 Score = 321 bits (823), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 182/440 (41%), Positives = 265/440 (60%), Gaps = 17/440 (3%) Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q Q PW+P GI+ L +DG+S+L + LT LLG + VL SW I K F + L+ Sbjct: 68 QMQFVESKPWVPSLGITYKLGVDGVSVLFLFLTSLLGWICVLASWTAIAKRIKEFMICLL 127 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 I ++GVF A+D+ LF+ FWE MLVPMY +I +WG G+ RI AA KFF+YT A Sbjct: 128 AIQSLMLGVFCALDLLLFYVFWEAMLVPMYLMIGIWG-----GEDRIYAAFKFFLYTLAG 182 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 L+ L+ IL L F G TF+ L++ ++ + + F IAFAVK+P+VP H Sbjct: 183 SLIFLVGILVLYF-----AGGRTFDILTLMDVSYDFELQRGVFIAFLIAFAVKVPMVPFH 237 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLPDAH QAPTAGS+ LAG+LLK AYG +RFSLP+ P+AS FAP+ L + I YG Sbjct: 238 TWLPDAHVQAPTAGSIILAGVLLKMGAYGFIRFSLPMLPDASHYFAPLMQGLSAVAIVYG 297 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 ++A AQ DIK+LIAY+S+SHMGF+ + ++T + GAVIQM HG++ LF+ G Sbjct: 298 GFLALAQQDIKKLIAYSSISHMGFITLGLFTFTINGTTGAVIQMFNHGITTGALFLFIGL 357 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFA---VATLGMPGTGNFVGEFMILFGSFQVV 418 +YER H+RD+ GGL +K +P +FFA ++++ +PGT F+GE ++L G+F V Sbjct: 358 VYERTHSRDIPAYGGL---LKAVPFYGIFFALFLLSSMAVPGTNGFIGEILVLSGTFGVN 414 Query: 419 PVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLL 478 G + + Y L + + G + A++ + ++ REL L L++ + + Sbjct: 415 NWAATAGVLGALLGAAYLLGIYRQMLLGPIRIPDAAK-MWDLNKRELCCALPLLIFVFWI 473 Query: 479 GFYPQPILDTSHSAIGNIQQ 498 GFYP+P L + ++ + Sbjct: 474 GFYPKPFLSILQPTLKHLLE 493 >UniRef50_D0L251 Proton-translocating NADH-quinone oxidoreductase, chain M n=41 Tax=Proteobacteria RepID=D0L251_HALNC Length = 507 Score = 321 bits (823), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 191/515 (37%), Positives = 310/515 (60%), Gaps = 40/515 (7%) Query: 2 LLPWLILIPFIGG-FLCWQTERFGV---KVPRWIALITMGLTLALSLQLWLQGGYSLTQS 57 +L ++ +P I G F+ W FG + RW AL + + LSL L L G + T + Sbjct: 8 MLSLIVWLPIIAGIFVMW----FGAGRARFARWFALASSVVVFLLSLAL-LPGFDTHTYA 62 Query: 58 AGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFH 117 Q + WIP+FGI HL +DG+SL +++LT V+ ++ +W+ I++ + Sbjct: 63 M-----QFVERVAWIPQFGIHYHLGVDGISLPLLILTTFTTVIVIVSAWEVIQEKAHQYL 117 Query: 118 LNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIY 177 + + G + G F A+D +F+FF+E ML+PM+ +I +WG G R+ A KFF+Y Sbjct: 118 AAFLIMEGMMNGTFAALDAIVFYFFFEGMLIPMFVIIGIWG-----GPRRVYATIKFFLY 172 Query: 178 TQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPV 237 T + MLIA L+++++ +F+ + P++ + L+ L FFIAFAVK+P+ Sbjct: 173 TFLGSVFMLIA---LIYMYFKGG---SFSILHMQQLPLTLTEQVLIFLAFFIAFAVKIPM 226 Query: 238 VPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 P+H WLPDAH +APT GSV LA I+LK YG LRFSLP+ P+ASA + + +I Sbjct: 227 WPVHTWLPDAHVEAPTGGSVILAAIMLKIGGYGFLRFSLPITPDASALLDSMIIAFSLIA 286 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIY--------------TGSQLAYQGAVI 343 I Y ++A Q+D+K+L+AY+S+SHMGFV + ++ +G +LA +GA++ Sbjct: 287 IVYIGFVALVQSDMKKLVAYSSISHMGFVTLGMFVIFMIAANPLNVSGSGVRLALEGAMV 346 Query: 344 QMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGN 403 QMI+HGL +A +F+ G LY+R+H+R++ GG+ + M W A+ + FA+A +G+PGT Sbjct: 347 QMISHGLISAAMFLSIGVLYDRLHSREISAYGGVVNTMPWFAAMVVVFAMANVGLPGTSG 406 Query: 404 FVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLR 463 FVGEFM++ SF+ I +++ L+ + Y+L M+ R FG +++ +L ++ R Sbjct: 407 FVGEFMVILASFKANFWIALLAALTLIIGASYTLWMVKRVIFGDVQNE-GVAKLKDVNKR 465 Query: 464 ELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQ 498 E +M+ LVVL++L+G +P P+LD H+ I ++ Q Sbjct: 466 EAWMLGSLVVLIILVGIWPNPLLDLMHATIEHLAQ 500 >UniRef50_D2L238 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L238_9DELT Length = 498 Score = 319 bits (818), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 175/431 (40%), Positives = 258/431 (59%), Gaps = 8/431 (1%) Query: 57 SAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFF 116 +AG P D WIP GI L DGLSL+ VVLT +G+ + S + + + Sbjct: 54 AAGRPDLPVVEDAAWIPELGIRYTLTCDGLSLVFVVLTACIGLCCMAASRHDDTRRPALY 113 Query: 117 HLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFI 176 H ++ L V GVFLA D+FLF FWE LVP++FLI ++GH R+ A KFF+ Sbjct: 114 HALILCSLATVQGVFLATDLFLFALFWEAQLVPVFFLIGVFGHG-----DRMRVAIKFFL 168 Query: 177 YTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMP 236 ++ GL+M +A++AL + TF +L P+ L F ++FA+K+P Sbjct: 169 FSAVGGLLMFLAVIALGIYAADGPNGPTFALFDLTRLPLPVTTGRWLFAAFVLSFAIKIP 228 Query: 237 VVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVI 296 +VP+H WLPDAH++APTAGS+ LAG+LLKT Y L+RF+LPLFP A+ FAP+ +LG+ Sbjct: 229 LVPVHMWLPDAHTEAPTAGSLILAGLLLKTGGYALIRFALPLFPEAALAFAPLLTFLGLA 288 Query: 297 GIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLF 356 G+FY + +A AQ D+KRL+AY+S+ HMG V++AI +GS+LA GAV+ M++H L++ GLF Sbjct: 289 GLFYASAVALAQEDVKRLVAYSSIGHMGLVVVAIVSGSRLALGGAVLLMVSHALTSGGLF 348 Query: 357 ILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ 416 L G + ER+ +R ++GGLW++ A L +A +PG FVGE MI+FG F+ Sbjct: 349 ALAGMIGERLGSRRFEVLGGLWNRAPAFGAAFLCCVLAAAALPGLSGFVGEAMIVFGLFK 408 Query: 417 VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLV 476 + + G+ Y L + FG A+S S P + RE +++ LV+ ++ Sbjct: 409 AHLAAGLFAVAGMAVTLAYLLRLARDVLFGPAQS---SALFPDLDARETTLLVSLVLAML 465 Query: 477 LLGFYPQPILD 487 LG +P P+L Sbjct: 466 WLGLFPGPVLS 476 >UniRef50_B9L177 Nadh-quinone oxidoreductase chain m n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L177_THERP Length = 524 Score = 319 bits (817), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 187/501 (37%), Positives = 282/501 (56%), Gaps = 41/501 (8%) Query: 26 KVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDG 85 + RWIAL+ ++ LS+ + + + + Q+ FD W+P GI+ L +DG Sbjct: 30 RAARWIALLASSVSFLLSVVMLV----AFDRDQSTLQFTETFD--WLPELGIAYRLGVDG 83 Query: 86 LSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEM 145 +S +V LT LL ++AVL SW I +++ L+ + G++GVF+++D+FLF+ FWE+ Sbjct: 84 ISAPLVGLTTLLTLIAVLASWDPIRHRVREYYITLLLLATGMLGVFVSLDLFLFYVFWEI 143 Query: 146 MLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTF 205 +L+PM +I +WG R+ AA KFF+YT A L+ML+ I+A+ ++ TG+ T Sbjct: 144 VLIPMALIIGVWGS-----ANRVYAAVKFFLYTLAGSLLMLVGIVAIYQEYFRQTGIRTL 198 Query: 206 NYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLK 265 + +L S ++ L FF+AFA+K+P+ P H WLPDAH +APTAGSV LAG+LLK Sbjct: 199 DVLQLAQGQYSEAFQFWTFLAFFLAFAIKVPMWPFHTWLPDAHVEAPTAGSVILAGVLLK 258 Query: 266 TAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGF 325 YG LRF+LPLFP+A+ +AP + L VI I YGA MA Q D K+L+AY+SVSHMGF Sbjct: 259 MGGYGFLRFNLPLFPDATRMWAPAIVVLSVIAILYGALMALVQQDFKKLVAYSSVSHMGF 318 Query: 326 VLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLP 385 V + I+ +Q GA++ M++HG + LF++ G LYER HTRD+ GGL M Sbjct: 319 VTLGIFVLNQPGLSGAMVVMLSHGFVTSALFLIVGVLYERAHTRDLAAFGGLARNMPVFA 378 Query: 386 ALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYF 445 A F +A+LG+PG FVGEF+ L G F+ V+ T ++ A+ Y L + R Sbjct: 379 AFFGLFTLASLGLPGLSGFVGEFLALLGGFRAYRWAGVLGTIVVILAAWYMLRVYQRVAL 438 Query: 446 GKAKSQIA------------------------------SQELPGMSLRELFMILLLVVLL 475 +A + + P ++ RE +L L +L Sbjct: 439 VRAPGEPPDPDDPERRLALAHGLPPIAGGSDGPHAYPDPRTFPDLTWREAVSLLPLALLT 498 Query: 476 VLLGFYPQPILDTSHSAIGNI 496 + +G YP P+L+ A+ + Sbjct: 499 IWIGVYPLPLLEMLEPALAAL 519 >UniRef50_D0LZ06 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LZ06_HALO1 Length = 585 Score = 316 bits (810), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 186/464 (40%), Positives = 278/464 (59%), Gaps = 21/464 (4%) Query: 38 LTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLL 97 LT LSL ++ GY + +A Q+Q D+PWI G L IDG+SL +VVLT Sbjct: 42 LTFGLSLGIF---GYFESANA---QFQLVIDLPWIDGLGAHFKLGIDGISLWLVVLTTFT 95 Query: 98 GVLAVLCSWKEIEKYQGFFHLNLMWILG-GVIGVFLAIDMFLFFFFWEMMLVPMYFLIAL 156 + +L S+ I K + F + LM +L G++G F+++D+FLF+ FWE+ML+PMY LI + Sbjct: 96 MPIVLLSSYSSIHKREREF-VALMLVLELGMLGAFVSLDLFLFYIFWELMLIPMYLLIGI 154 Query: 157 WGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMS 216 WG G RI A+ KF IYT L+ML AI + VH G +T + E + +S Sbjct: 155 WG-----GNRRIYASIKFVIYTMVGSLLMLAAIFYVYVVHAEVAGFYTTDLEAVQRVLLS 209 Query: 217 SGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSL 276 + F +AFA+K+P+ PLH WLPDAH QAPT GSV LAG+LLK YG LRF++ Sbjct: 210 RDAQVWCFAAFALAFAIKVPLFPLHTWLPDAHVQAPTTGSVVLAGVLLKFGVYGFLRFAV 269 Query: 277 PLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQL 336 P+FP ++ AP L V GI YGA +AFAQ D+K+L+AY+SVSH+GF ++ +++ + Sbjct: 270 PMFPYGTSVVAPYLAILAVAGIIYGALVAFAQDDVKKLVAYSSVSHLGFCILGLFSMTAR 329 Query: 337 AYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATL 396 +G++ M++HGL+ GLF+ G LYER HTR M GGLW++M + L + + Sbjct: 330 GIEGSIFAMLSHGLTTGGLFLAIGVLYERRHTRRMAEYGGLWAQMPVFAGVFLICTLGSA 389 Query: 397 GMPGTGNFVGEFMILFGSFQVVP-------VITVISTFGLVFASVYSLAMLHRAYFGKAK 449 G+PG F+GEF+ +FG+F ++ ++ G++ +VY L M + FG Sbjct: 390 GLPGLSGFIGEFLTIFGTFTTSAAYLPAPRLLGALAATGVILGAVYLLFMFQKLMFGPI- 448 Query: 450 SQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAI 493 ++ A++ L +S RE+ + LVV++ ++G PQP L T ++ Sbjct: 449 TRDANRGLRDLSGREMVVFAPLVVMIFVMGVAPQPFLKTMEPSV 492 >UniRef50_Q1NQL7 Proton-translocating NADH-quinone oxidoreductase, chain M n=4 Tax=Bacteria RepID=Q1NQL7_9DELT Length = 507 Score = 315 bits (807), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 188/491 (38%), Positives = 286/491 (58%), Gaps = 18/491 (3%) Query: 6 LILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQS 65 L+ +P +G + G R ALI +T +S+ L+ + +S + Q+ Sbjct: 16 LVFLPLLGALVMLALP--GDNACRNWALIVTVITACVSMPLF----FLFDRSTHLYQFGE 69 Query: 66 EFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILG 125 WI + I+ L IDG+SLL+V++T L+ L VL SW+ I+K F + L+ + Sbjct: 70 HHT--WIEAWNINYTLGIDGISLLLVLMTTLIMPLCVLGSWRYIQKRVKEFMICLLLMET 127 Query: 126 GVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVM 185 ++GVF+A+D LF+ FWE ML+PMY LIA+WG G R+ A+ KFF+YT A +++ Sbjct: 128 AMLGVFMALDFVLFYIFWEAMLIPMYLLIAVWG-----GPRRMYASIKFFLYTLAGSVML 182 Query: 186 LIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLP 245 L+AI+AL + + TF+ L+ S+ + + L FF+AFA+K+P+ P H WLP Sbjct: 183 LVAIIAL----FLTSEPQTFSIPLLMEQSYSTTFQIWVFLAFFLAFAIKVPMFPFHTWLP 238 Query: 246 DAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMA 305 AH +APTAGSV LA +LLK YG LRF LP+ P A+ F P +WL +IGI YG + A Sbjct: 239 AAHVEAPTAGSVILASVLLKMGTYGFLRFCLPITPEATHIFMPYILWLSIIGILYGGFTA 298 Query: 306 FAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYER 365 AQ D+K+LIAY+SV HMGFV + I+ + QGA++QMI HG++ LF G LYER Sbjct: 299 LAQQDMKKLIAYSSVGHMGFVTLGIFVLNSQGIQGAILQMINHGITTGALFFCVGMLYER 358 Query: 366 IHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVIS 425 H+R++ + G+ M FFA+++L PGT +F+GEFMIL GSF +I + Sbjct: 359 THSRELALNAGVGRFMPIYVLFLGFFALSSLAFPGTNSFIGEFMILAGSFSYSIIIAAFA 418 Query: 426 TFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPI 485 G V A+ Y +L R +G + + L ++LRE+ ++ L++ + +G P P Sbjct: 419 IPGAVLAAAYMFRLLQRVVWGGTDNP-EHRGLLDLNLREVVVLAPLLLFVFWIGLSPAPF 477 Query: 486 LDTSHSAIGNI 496 L+ ++ ++ Sbjct: 478 LEVMEVSVAHL 488 >UniRef50_Q2S2L1 NADH dehydrogenase i, m subunit n=7 Tax=Bacteria RepID=Q2S2L1_SALRD Length = 545 Score = 315 bits (806), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 210/498 (42%), Positives = 307/498 (61%), Gaps = 23/498 (4%) Query: 1 MLLPWL----ILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQ 56 M +P+L + +P G L R RW AL T +T LS+ L++ GY + Sbjct: 2 MNIPYLTSLVVFLPAAGALLTLFLRR--ASAIRWTALATTTVTFVLSIGLFV--GYDPSV 57 Query: 57 SAGIPQWQSEFDMPWIPR-FGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI-EKYQG 114 S + ++ W+P + + + +DGLSLL+V+LT LLG + VL SW I EK++G Sbjct: 58 STALGPQLADVWAGWLPDGYDVKYFVGVDGLSLLLVMLTTLLGPIVVLSSWTYIGEKHKG 117 Query: 115 FFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKF 174 ++ L L+ + G+ GVF + D+ LF+ F+E+ L+PMYF+I +WG GK RI AA KF Sbjct: 118 YYAL-LLLLQTGITGVFTSFDLLLFYIFFELTLIPMYFIIGIWG-----GKERIYAAVKF 171 Query: 175 FIYTQASGLVMLIAILALVFVHYNA--TGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFA 232 IYT L+ML+ IL L + +A GV+T ++ LL + V+ L F +FA Sbjct: 172 VIYTLVGSLLMLVGILYLGYAAGDAVNNGVFTTDWYTLLEYNIPLAVQGWLFAVFAFSFA 231 Query: 233 VKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMW 292 +K+P+ PLH WLPDAH QAPT GSV LAG+LLK YGLLRF LPLFPN + +A + Sbjct: 232 IKVPLFPLHTWLPDAHVQAPTGGSVILAGVLLKMGTYGLLRFCLPLFPNVAQSYAGLFAV 291 Query: 293 LGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSA 352 + +IGI YGA +A Q D K L+AY+S+SH+GFV++ ++ + A QGA+IQM+ HGLS Sbjct: 292 IAIIGIIYGALVARVQDDAKSLVAYSSISHLGFVVLGLFAFTTEAMQGAMIQMVNHGLST 351 Query: 353 AGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILF 412 LF+L G LYER HTR M GGL + + L L + +A+ G+PG FVGEF+IL Sbjct: 352 GALFLLVGMLYERRHTRLMDDYGGLATSVPVLTTLMVISVLASAGLPGLNGFVGEFLILL 411 Query: 413 GSFQVV----PVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMI 468 GSF+ PV+ +T G++ A++Y L M++R +FG+ + A+ ++ ++ RE ++ Sbjct: 412 GSFKSTVIDSPVLIAFATTGVILAAMYLLHMVYRTFFGEL-TDAANAQMADLNAREFGLM 470 Query: 469 LLLVVLLVLLGFYPQPIL 486 + L+VL+ +LGFYP P L Sbjct: 471 VPLIVLMFVLGFYPGPFL 488 >UniRef50_B1ZA34 Proton-translocating NADH-quinone oxidoreductase, chain M n=159 Tax=cellular organisms RepID=B1ZA34_METPB Length = 527 Score = 314 bits (804), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 185/460 (40%), Positives = 272/460 (59%), Gaps = 19/460 (4%) Query: 29 RWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSL 88 RW ALIT +T LSL W + Y + P +Q W+ I L +DG S+ Sbjct: 36 RWAALITTVVTFLLSLVAWAR--YDIAS----PSFQLVESHAWLAE-TIRFKLGVDGFSM 88 Query: 89 LMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLV 148 +++LT L + SW +E + + + + +IGVF A+D+ LF+ F+E L+ Sbjct: 89 PLILLTTFLMPFCIGASWLSVENRVKEYFVAFLVLETTMIGVFCALDLVLFYLFFEAGLI 148 Query: 149 PMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYE 208 PM+ +I +WG GK RI A+ KFF+YT ++ML+AI+A+ Y G T + Sbjct: 149 PMFLIIGIWG-----GKRRIYASFKFFLYTLLGSVLMLLAIMAM----YWEAG--TTDIP 197 Query: 209 ELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAA 268 LL G+++ L L FF +FAVKMP+ P+H WLPDAH +APTAGSV LAGILLK Sbjct: 198 TLLAHRFPVGLQWWLWLAFFASFAVKMPMWPVHTWLPDAHVEAPTAGSVILAGILLKMGG 257 Query: 269 YGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLI 328 YG +R SLP+ P+ASA FAP+ L VI I + + A QTDIK+LIAY+SV+HMGFV + Sbjct: 258 YGFIRISLPMLPDASASFAPLVFALSVIAIIFTSLTAMMQTDIKKLIAYSSVAHMGFVTL 317 Query: 329 AIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALS 388 ++T ++ QGA+ MI+HG+ + LF+ G +Y+R+HTR++ GGL +M A Sbjct: 318 GLFTLNEQGIQGALFLMISHGIVSGALFLCVGVVYDRMHTREIAAYGGLVKRMPLYAAAM 377 Query: 389 LFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKA 448 + F +A +G+PGT FVGEF+ + G+F+ P + S FG++ ++ Y+L + R +GK Sbjct: 378 MVFTMANVGLPGTSGFVGEFLAMMGAFRANPTVAFFSVFGIILSAGYALWLYARVIYGKL 437 Query: 449 KSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDT 488 Q + + RE +I LV L + G +P P+LDT Sbjct: 438 DKP-NLQGILDLDNREKIIIAPLVALTIWYGVHPAPVLDT 476 >UniRef50_Q3BRP1 NADH-ubiquinone oxidoreductase NQO13 subunit n=10 Tax=Xanthomonas RepID=Q3BRP1_XANC5 Length = 500 Score = 310 bits (795), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 187/508 (36%), Positives = 287/508 (56%), Gaps = 35/508 (6%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL LI +P IGG L + RW +L T ALSL L GY A Sbjct: 6 LLSILIWLPIIGGALILALRN--AETARWASLAVAVATFALSLPLL---GYDTANDA--- 57 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q WIP + I +L +DG+++ ++VLT L+ VLA++ +W+ I+K + + Sbjct: 58 -MQFIELHTWIPAYNIGYNLGVDGIAVALIVLTTLVTVLALIGAWRSIDKRVNQYVAAFL 116 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + G +G+F A D LF+ F+E ML+PM+ +I +WG G RI AA KFF+YT Sbjct: 117 ILEGVTVGIFAATDAMLFYVFFEAMLIPMFLIIGVWG-----GPRRIYAAMKFFLYTFLG 171 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 ++ML+ LV+++ +F +L +++ + + F IAFAVK+P+ P+H Sbjct: 172 SVLMLVG---LVYLYLKGG---SFQLADLYALQLTAKEQTWIFFAFLIAFAVKVPMFPVH 225 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLPDAH +APTAGSV LA I LK YG LRF+LP+ P+AS EFA + + L +I + Y Sbjct: 226 TWLPDAHVEAPTAGSVILAAIALKIGGYGFLRFNLPIVPDASHEFAWLVITLSLIAVIYV 285 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIY------------TGSQLAYQGAVIQMIAHG 349 +A Q D+K+L+AY+S++HMGFV + + ++L QGA++QMI+HG Sbjct: 286 GLVALVQDDMKKLVAYSSIAHMGFVTLGTFIAFTLVREYGSTDAARLGLQGAMVQMISHG 345 Query: 350 LSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFM 409 + +F G LY+R+HTR + GG+ + M W S+ F +A G+PGT FVGEFM Sbjct: 346 FVSGAMFSCIGVLYDRMHTRRIADYGGVVNVMPWFATFSMLFFMANAGLPGTSGFVGEFM 405 Query: 410 ILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGK-AKSQIASQELPGMSLRELFMI 468 ++ SFQ P++ + LV + Y+L + R +FG+ A + +A EL ++ RE F++ Sbjct: 406 VILASFQKHPLVAFGAATTLVITAAYTLWLYKRVFFGEVANAHVA--ELKDINGREAFVL 463 Query: 469 LLLVVLLVLLGFYPQPILDTSHSAIGNI 496 + ++ LG YP+P+ D +I + Sbjct: 464 GVFAAGVLALGLYPKPLTDLMEPSIAKL 491 >UniRef50_A7NEJ8 NADH-quinone oxidoreductase, subunit M n=19 Tax=Francisella RepID=A7NEJ8_FRATF Length = 529 Score = 309 bits (792), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 202/531 (38%), Positives = 292/531 (54%), Gaps = 49/531 (9%) Query: 2 LLPWLILIPFIGGF--LCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAG 59 LL +I +P +GGF L +T+ V RW+AL+ LTLAL + L YS + Sbjct: 7 LLSLIIWLPIVGGFVVLATRTKELHGDVARWVALVFSCLTLALCIPLVTSFDYS----SS 62 Query: 60 IPQWQSEFDMPWIPRFG---ISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFF 116 Q+Q + W FG I L +DG S+L +VLT ++ VL +W I+ + Sbjct: 63 AMQFQES--VKWFKVFGMHDIYYSLGVDGFSVLFIVLTSFATLVIVLAAWISIKTKVRQY 120 Query: 117 HLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFI 176 + G GVF A D L++ FWE +L+P I +WG GK + AA K+F+ Sbjct: 121 MAIFLITCGLTNGVFCATDSILYYVFWEALLIPTCLGIGIWG-----GKHKAYAAVKYFM 175 Query: 177 YTQASGLVMLIAILAL----------VFVHYNATGV-----WTFNYEELLNT-PMSSGVE 220 YT + +L AIL + V+ + + W + +++ + + Sbjct: 176 YTFFGSVFLLAAILYIQTRVAASPTHFLVNQDTYSIQNFIAWATQSQGFIDSVKFTLTAQ 235 Query: 221 YLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFP 280 +L+ FF+AFAVK+P+ P H WLPDAHS+AP GSV LA ++LK AYG LRF++P+ P Sbjct: 236 WLVFGAFFLAFAVKIPMWPFHSWLPDAHSEAPAGGSVILAALMLKLGAYGFLRFAIPMLP 295 Query: 281 NASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIY--------- 331 +A + + + +I I Y +A AQTD+KRLIAY+S+SHMG V + ++ Sbjct: 296 EVTASLEYVLIIMSLIAIVYVGVVAVAQTDVKRLIAYSSISHMGLVTLGLFSIFILKNAD 355 Query: 332 -----TGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPA 386 T +QLA QGAV QMIAH S+ G+FI G LY R+HTR++ G+ M Sbjct: 356 PVLGTTHAQLALQGAVFQMIAHAFSSGGMFIGIGYLYLRMHTREISDFSGVAKTMPIFAT 415 Query: 387 LSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFG 446 L F +A +G+PGT FVGEFMIL FQ P+I +I+ LV A +Y+L M R +FG Sbjct: 416 FFLLFCMANVGLPGTSGFVGEFMILLAVFQYSPLIALIAGLTLVIAPIYTLWMYKRVFFG 475 Query: 447 KAKS-QIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNI 496 + S Q+AS L ++ ELF+ +LL V ++L GFYP+PIL S +A +I Sbjct: 476 EVVSTQVAS--LTDLNRMELFVFILLAVPILLFGFYPEPILQLSAAASAHI 524 >UniRef50_D1C6X8 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6X8_SPHTD Length = 527 Score = 306 bits (784), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 192/528 (36%), Positives = 301/528 (57%), Gaps = 40/528 (7%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L L +P +G + + + + RW+AL ++LALSL + G+ T ++G+ Sbjct: 6 ILSALTYVPLVGAAIIFFWPKASPQAARWVALGASLVSLALSLVM--LAGFD-TSASGM- 61 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q+ F+ W+P G+S H +DG+S+L++VL+ LL + ++ SW I+ + + ++ Sbjct: 62 QFVERFE--WLPALGVSYHFGVDGISVLLIVLSTLLTTIGIVASWSSIQHRVREYMITML 119 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + G++GVF+++D+FLF+ FWE+ML+PM LI +WG R+ AA KFF+YT A Sbjct: 120 MLETGMLGVFVSLDLFLFYIFWEVMLIPMALLIGVWGSA-----NRVYAAVKFFLYTLAG 174 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 L+ML+ I+AL ++ TG+ T + +L + + FFIAFA+K+P+ P H Sbjct: 175 SLLMLVGIIALYQSYFEQTGIRTLDVLQLQQGNYGYTFQMWVFAAFFIAFAIKVPMWPFH 234 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLPDAH +APTAGSV LAG+LLK YGLLRF+LPLFP+A+ ++AP+ + L VIGI YG Sbjct: 235 TWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFNLPLFPDAARDWAPVIIVLSVIGIIYG 294 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 A +A Q D+K+L+AY+SVSHMGFV + I+ + GA+I M++HGL + LF+ G Sbjct: 295 ALVALVQPDLKKLVAYSSVSHMGFVTLGIFAFNAQGLYGAMIVMLSHGLVTSALFLCVGV 354 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 +Y+R HTR + GGL + M + F A+LG+PG FVGEF+ + G+F+ Sbjct: 355 IYDRGHTRLISRFGGLATNMPVYASFLGLFTFASLGLPGLSGFVGEFLSILGAFRAERAA 414 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSL------------------- 462 VI+ ++F++ Y L M R + +A + P L Sbjct: 415 GVIAFLVVIFSAWYMLWMYQRVAWQRAPGEPPDANDPEAKLAGDEPRPVMGGAEHGGDVV 474 Query: 463 ----------RELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWF 500 RE + L VL + +G YPQ ++ +A+ + + F Sbjct: 475 DPRTFRDVTWREAMTLAPLAVLTIWMGVYPQWFMNFLRTALELVAKPF 522 >UniRef50_C3XM21 NADH-ubiquinone oxidoreductase n=4 Tax=Campylobacterales RepID=C3XM21_9HELI Length = 534 Score = 306 bits (783), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 189/497 (38%), Positives = 296/497 (59%), Gaps = 23/497 (4%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVP-RWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 LL LI P G L G+K + A++ + LA +L LW Y +SA Sbjct: 4 LLTLLIFFPLFGALLA-----IGIKENLKTYAIVISAIELAFALLLW----YGFDKSADG 54 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 Q+ + + + FG+S + +DG+SL +++L+ +G++ + + E + ++L Sbjct: 55 FQFITALSL--VEGFGVSYLVGVDGISLFLILLSAFIGLIGFIYLNENYEAKK--LIISL 110 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + + +IGVF A+DM LF+ FWE+ LVPM ++I WG +RI AA KFF+YT Sbjct: 111 LCLESIMIGVFCALDMILFYIFWELSLVPMLYIIGAWGSG-----SRIYAAVKFFLYTFL 165 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLN-TPMSSGVEYLLMLGFFIAFAVKMPVVP 239 ++ML+ IL L + ++ +G+WTF+ E + + + GV+ L L FF AVK+P+ P Sbjct: 166 GSMLMLVGILFLAYYYFEVSGIWTFSLLEWYSLSAIPKGVQLWLFLAFFAGLAVKVPMFP 225 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEF-APIAMWLGVIGI 298 H WLP AH QAPT GS+ LA +LLK YG +RFSLPLFP+AS F P+A+ L +I I Sbjct: 226 FHTWLPYAHGQAPTIGSIILAAVLLKMGTYGFVRFSLPLFPDASIFFLMPVAI-LSLIMI 284 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFIL 358 YGA++AFAQ DIK++IAY+S+SHMG +++ I+ + G+V M++HG+ + LF+L Sbjct: 285 IYGAFVAFAQEDIKQVIAYSSISHMGVIMVGIFALNVEGITGSVFFMLSHGIISGALFML 344 Query: 359 CGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVV 418 G LYER HT+ + GG+ M A+ A+A+ G+P T FVGEF+ L G FQV Sbjct: 345 VGMLYERRHTKMIAEFGGIAKVMPNYAAIFGIMAMASAGLPLTMGFVGEFLSLLGFFQVS 404 Query: 419 PVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLL 478 P++ I+ ++ +VY L + + +FGK + + + +L ++ RE +L LV +++ L Sbjct: 405 PIMAGIAGISIIVGAVYMLHLYRKTFFGKVVN-VQNLKLSDLNAREWSALLPLVAIVIWL 463 Query: 479 GFYPQPILDTSHSAIGN 495 G YP+PIL+ + + N Sbjct: 464 GVYPKPILEPINKGVEN 480 >UniRef50_Q7NHJ9 NADH dehydrogenase subunit 4 n=1 Tax=Gloeobacter violaceus RepID=Q7NHJ9_GLOVI Length = 498 Score = 305 bits (781), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 190/459 (41%), Positives = 288/459 (62%), Gaps = 20/459 (4%) Query: 26 KVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDG 85 + R AL GLT LS + Y+ T+ PQ+ + W+P+ GIS ++A+DG Sbjct: 30 RFARVWALTVAGLTFLLSGLVAYNFDYTSTK----PQFAETIN--WLPQLGISYNIAVDG 83 Query: 86 LSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEM 145 LSL +V+LTGLL VL++L SW E+ K +++ ++ + GV+G F+A D LFF +EM Sbjct: 84 LSLPLVLLTGLLVVLSILTSW-ELNKRARLYYVLILLLSTGVLGAFMARDTILFFLAYEM 142 Query: 146 MLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTF 205 L+P+YFLI++WG GK R A TKF +YT SG+ +L+A L+ F +GV +F Sbjct: 143 ELIPLYFLISIWG-----GKRREYAGTKFLLYTFLSGVALLVAFLSTYFF----SGVNSF 193 Query: 206 NYEELLN--TPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGIL 263 + + L N TP +++ + + FA+KMP+VPLH WLPDAH +APTA SV LAG+L Sbjct: 194 SIDVLANPATPYPLAFQFITLGLITLGFAIKMPLVPLHTWLPDAHVEAPTAVSVLLAGVL 253 Query: 264 LKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHM 323 LK YG++RF L +FP A+ +FA + L I + Y + A AQTDIK++IAY+S++HM Sbjct: 254 LKLGTYGIVRFGLGIFPEAAVQFAWLLSVLAAINVVYASLAAMAQTDIKKMIAYSSIAHM 313 Query: 324 GFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKW 383 G+V++ I + ++ GA+ QMI+HG+ + LF+L G +YE+ TR++ +GGL++ M Sbjct: 314 GYVVLGIASLNETGLGGAMFQMISHGIISGLLFMLVGLIYEKSGTRELPKLGGLFATMPV 373 Query: 384 LPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRA 443 + A + A+A G+PG FV EFM+ G + PV TV+ FG+V ++Y LAML RA Sbjct: 374 VGAFFVGAAMANAGLPGMSGFVAEFMVFCGGIERYPVATVLCIFGIVLTAIYMLAMLARA 433 Query: 444 YFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYP 482 +FGK + + + +P + EL +L+V+ V LG +P Sbjct: 434 FFGKLPANL--ETMPRVKAWELIPATVLLVICVGLGLFP 470 >UniRef50_Q02CT2 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02CT2_SOLUE Length = 518 Score = 303 bits (776), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 194/481 (40%), Positives = 286/481 (59%), Gaps = 28/481 (5%) Query: 30 WIALITMGL-TLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSL 88 W L ++G+ +L L W G S Q A D+PWI I ++ +G+S+ Sbjct: 33 WALLCSLGIFAASLGLLAWFDRGLSGEQFA--------IDVPWISSPNIHFAISANGVSI 84 Query: 89 LMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLV 148 +V+L+ LL L VL SW I F+ L+ + G++GVFLA D+FLF+ FWE+ LV Sbjct: 85 WLVLLSTLLTPLCVLVSWNSIHDRTKEFYAFLLLLEFGLVGVFLAQDLFLFYVFWEIALV 144 Query: 149 PMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNY- 207 PMYF+I +WGH RI AA KFF+YT A ++ML AI+ + YN T TF+Y Sbjct: 145 PMYFMIGIWGHD-----RRIYAAVKFFLYTMAGSVLMLAAIIYI----YNKTQ--TFSYP 193 Query: 208 ---EELLNTPMS--SGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGI 262 E L N +S G + LL L FF+AFA+K+P+ PLH WLPDAH +APTAGS+ LA + Sbjct: 194 AILEMLSNGRLSFPPGEQMLLFLAFFLAFAIKVPLFPLHTWLPDAHVEAPTAGSIMLASV 253 Query: 263 LLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSH 322 +LK YG+L F LP+FP+A+ AP L +IGI YGA +A Q ++K+L+AY+SVSH Sbjct: 254 MLKMGTYGILHFCLPMFPSAARACAPWITVLAIIGIIYGALVAMVQPNMKKLVAYSSVSH 313 Query: 323 MGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMK 382 +GFV++ I+T +Q GAV QM+ HG+S LF++ G LYER H+ ++ GG+ + Sbjct: 314 LGFVVLGIFTFTQPGLDGAVYQMLNHGISTGALFLVVGLLYERNHSLEINSYGGVATVAP 373 Query: 383 WLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHR 442 WL L +A++G+P NFVGEF++L G+ V ++ G++ ++ Y L M R Sbjct: 374 WLSVAFLITTLASVGLPTLNNFVGEFLVLQGAAIANFPWAVWASIGVILSACYMLWMYQR 433 Query: 443 AYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPIL-DTSHSAIGNIQQWFV 501 ++G+ + + P ++LRE IL L+ ++V +G + Q L S + ++Q V Sbjct: 434 VFYGEVNPHV-REHTPDLNLREWAAILPLIAMMVWMGVFSQSFLPPVSQNTARILKQTNV 492 Query: 502 N 502 N Sbjct: 493 N 493 >UniRef50_Q1IS53 Proton-translocating NADH-quinone oxidoreductase, chain M n=16 Tax=Bacteria RepID=Q1IS53_ACIBL Length = 559 Score = 303 bits (775), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 194/512 (37%), Positives = 289/512 (56%), Gaps = 22/512 (4%) Query: 6 LILIPFIGGFLCWQTERFGVKVPRWIALITM--GLTLALSLQLWLQGGYSLTQSAGIP-- 61 ++ P G L + RWIA + G ++L L W +S P Sbjct: 10 VLFTPLAGAILLLMVPKENKNAIRWIANLAALAGFLVSLPLIPWFWA----VKSEVTPYF 65 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 ++ WIP G L IDG+S L+++LT LLG +++L SW IE ++ + Sbjct: 66 KFAEGSTNNWIPSIGAGYQLGIDGISFLLIILTTLLGSISILSSWTAIENRVKEYYAWFL 125 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + G++GVF+A D FLFF FWE MLVPMY LI +WG G ++ AA KFF+YT A Sbjct: 126 LLQTGMLGVFMANDFFLFFVFWEAMLVPMYLLIGIWG-----GPRKLYAAIKFFLYTLAG 180 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNT-PMSSG-VEYLLMLGFFIAFAVKMPVVP 239 ++ML+ IL L F H+ TGV+TF+ E L T P+ +G L FF+ FA+K+P+ P Sbjct: 181 SVLMLLGILFLYFHHHTVTGVYTFSLEALYATAPLITGKAAIFLFFAFFVGFAIKVPMFP 240 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAE--FAPIAMWLGVIG 297 H WLPDAH +APTAGSV LAG+LLK YGL+RFSLP FP + + + L +IG Sbjct: 241 FHTWLPDAHVEAPTAGSVILAGVLLKMGTYGLIRFSLPFFPAVATIKWVQALLITLSLIG 300 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 I YGA ++ Q D+K+L+AY+SVSH+GF + I+ +Q+ G+VIQ I HG+S LF+ Sbjct: 301 ILYGALVSLVQKDMKKLVAYSSVSHLGFCTLGIFVFTQMGIAGSVIQQINHGISTGALFL 360 Query: 358 LCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV 417 + G LYER HTR++ GG+ + M ++L ++++G+P FVGE I+ +F V Sbjct: 361 IVGILYERRHTREISEYGGISTVMPVYATIALIMFMSSMGLPLLNGFVGEMPIMMATFMV 420 Query: 418 VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVL 477 + + G+V A+ Y L + R +FG + +++L ++ REL + LV+L + Sbjct: 421 NKTWAIWAIPGVVLAAAYLLWLYQRVFFGTVTNP-KNEKLADLTPRELATFVPLVILALA 479 Query: 478 LGFYPQPILDTSHSAIGNIQQWFVNSVTTTRP 509 +G YPQP+ ++ ++ RP Sbjct: 480 IGLYPQPLFKILDQPAAKLEA----TINANRP 507 >UniRef50_P93313 NADH-ubiquinone oxidoreductase chain 4 n=140 Tax=cellular organisms RepID=NU4M_ARATH Length = 495 Score = 303 bits (775), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 178/493 (36%), Positives = 280/493 (56%), Gaps = 17/493 (3%) Query: 6 LILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQS 65 LIL P +G + +++ R I L +T SL LW+Q + ++Q Sbjct: 15 LILCPVLGSIILLFIPNSRIRLIRLIGLCASLITFLYSLVLWIQF------DSSTAKFQF 68 Query: 66 EFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILG 125 + W+P I+ +L IDG+SL V+LT L + +L W + Y + + + Sbjct: 69 VESLRWLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYIIAFLICEF 128 Query: 126 GVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVM 185 +I VF +D+ LF+ F E +L+PM+ +I +WG + + +I AA +FF+YT L M Sbjct: 129 LMIAVFCMLDLLLFYVFPESVLIPMFIIIGVWGSR----QRKIKAAYQFFLYTLLGSLFM 184 Query: 186 LIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLP 245 L+AIL ++F TG T + + LL T S + L + FF +FAVK+P+VP+H WLP Sbjct: 185 LLAILLILF----QTG--TTDLQILLTTEFSERRQIFLWIAFFASFAVKVPMVPVHIWLP 238 Query: 246 DAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMA 305 +AH +APTAGSV LAGILLK YG LRFS+P+FP A+ F P L I I Y + Sbjct: 239 EAHVEAPTAGSVILAGILLKFGTYGFLRFSIPMFPEATLCFTPFIYTLSAIAIIYTSLTT 298 Query: 306 FAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYER 365 Q D+K++IAY+SV+HM V I +++ + G+++ M++HGL ++ LF+ G LY+R Sbjct: 299 LRQIDLKKIIAYSSVAHMNLVTIGMFSPNIQGIGGSILLMLSHGLVSSALFLCVGVLYDR 358 Query: 366 IHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVIS 425 TR +R GGL S M + F +A + +PGT +F+GEF+IL G+FQ ++ ++ Sbjct: 359 HKTRLVRYYGGLVSTMPNFSTIFFSFTLANMSLPGTSSFIGEFLILVGAFQRNSLVATLA 418 Query: 426 TFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPI 485 G++ + YSL + +R G K + ++ RE+F+ + +V LV +G YP+ Sbjct: 419 ALGMILGAAYSLWLYNRVVSGNLKPDFL-HKFSDLNGREVFIFIPFLVGLVWMGVYPKVF 477 Query: 486 LDTSHSAIGNIQQ 498 LD H+++ N+ Q Sbjct: 478 LDCMHTSVSNLVQ 490 >UniRef50_Q1RKE5 NADH-quinone oxidoreductase subunit M n=17 Tax=Rickettsieae RepID=NUOM_RICBR Length = 494 Score = 302 bits (774), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 168/445 (37%), Positives = 270/445 (60%), Gaps = 28/445 (6%) Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 P +Q W+ + G+ H+ IDG+S+ V LT L ++ ++ S ++KY + + Sbjct: 64 PTYQFVERYSWLDKIGLEFHVGIDGISIFFVSLTSFLTLICIIGSLFTVKKYIKEYLVCF 123 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + + IG F +I++ +F+ F+E++LVPMY +I +WG G+ RI AA KFF+YT Sbjct: 124 LLMESFCIGAFTSINLLVFYLFFEVILVPMYIIIGVWG-----GENRIYAAVKFFLYTFF 178 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNT-PMSSGVEYLLMLGFFIAFAVKMPVVP 239 + L L++++++ N E N P+ V+ +L FIAFA+K+P++P Sbjct: 179 GSVFFL---LSIIYIYSKIHSFDLSNIGEFTNNFPLH--VQQILWWAIFIAFAIKIPMIP 233 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 H WLPDAH QAPT+GSV LAGILLK YG LR LPL PNAS EFA +WL VI I Sbjct: 234 FHTWLPDAHVQAPTSGSVILAGILLKLGGYGFLRVLLPLLPNASQEFAIYVIWLSVIAII 293 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 Y + +A AQ D+K++IAY+S++HMG+V I I++ + GA+ QM++HG+ ++ LF++ Sbjct: 294 YASLVALAQKDMKKMIAYSSITHMGYVTIGIFSFTDSGVSGALFQMLSHGIISSCLFLIV 353 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATL---GMPGTGNFVGEFMILFGSFQ 416 G LYER+HT+++ GG+ SKM P L+ FF +A L G+PGT F+GEF+ L G ++ Sbjct: 354 GTLYERLHTKEIAKYGGVASKM---PVLATFFMIAMLGSVGLPGTSGFIGEFLSLLGIYK 410 Query: 417 VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFM-----ILLL 471 V + T ++ G++ ++Y L + G +I ++E+ ++ R+L++ I L Sbjct: 411 VNVIATFLAALGIILGAIYMLKLYKEVMLG----EITNKEI--INFRDLYIYEIISIAPL 464 Query: 472 VVLLVLLGFYPQPILDTSHSAIGNI 496 ++L++ G P IL+ H ++ N+ Sbjct: 465 ILLIIYFGLMPSSILNVFHLSVENL 489 >UniRef50_D2SHE2 Proton-translocating NADH-quinone oxidoreductase, chain M n=6 Tax=Actinomycetales RepID=D2SHE2_9ACTO Length = 545 Score = 301 bits (771), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 176/472 (37%), Positives = 266/472 (56%), Gaps = 40/472 (8%) Query: 57 SAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFF 116 AG ++Q + WIP FG+ L +DG++L+M++L G+L + VL SW++ Sbjct: 55 DAGGERFQLTTSVSWIPDFGVDFALGVDGIALVMLLLIGVLVPVVVLASWRDEPTGHRSV 114 Query: 117 HLNLMWIL---GGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATK 173 W+L ++GVF A D+FLF+ F+E MLVPMYFLI +G G R AA K Sbjct: 115 KTFFAWLLLLESLMVGVFAATDVFLFYVFFEAMLVPMYFLIGSFG-----GPRRQYAAVK 169 Query: 174 FFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAV 233 FF+Y+ GLVML A++ L V G TF ++ L + GV+ LL LGFF+AFA+ Sbjct: 170 FFLYSLVGGLVMLAAVIGLYVVSAAELGEGTFAFDALRGIEIDPGVQKLLFLGFFVAFAI 229 Query: 234 KMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWL 293 K P+VP H WLPD+ ++AP GSV L G+L K +G LR+ LPLFP+AS + AP + L Sbjct: 230 KAPLVPFHTWLPDSGAEAPIGGSVLLVGVLDKVGTFGFLRYCLPLFPDASRDLAPYVLAL 289 Query: 294 GVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAA 353 V G+ Y A +A Q+D+KRL++YTS++H GF+ + I+ + A G+V+ M+ HG++ Sbjct: 290 AVAGVLYAALLAMGQSDMKRLVSYTSIAHFGFIALGIFAFTTEAATGSVLYMVNHGIATG 349 Query: 354 GLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFG 413 LF++ G L R +R++ GG+ ++ L + L +A+L +PGT +FV EF++L G Sbjct: 350 LLFLVVGMLIARGGSREVGDYGGVAAQAPLLAGVFLVAGLASLALPGTNSFVSEFLVLIG 409 Query: 414 SFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQ------------------ 455 SF PV TV++T G+V A++Y L + R G + + Sbjct: 410 SFPTRPVFTVLATVGIVLAALYVLLLYQRTMHGPPRGVLLEPSPGTPAPATGGGGGATAA 469 Query: 456 --------------ELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAI 493 + +S REL + +V L++ LG YPQP++D A+ Sbjct: 470 TATLEAPAAAPARLRVRDLSRRELAVAAPMVALVIALGVYPQPLIDLIEPAV 521 >UniRef50_Q6MGN7 NADH dehydrogenase I chain M n=3 Tax=Bacteria RepID=Q6MGN7_BDEBA Length = 517 Score = 300 bits (769), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 170/448 (37%), Positives = 266/448 (59%), Gaps = 14/448 (3%) Query: 71 WIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGV 130 WI RFGI + IDG+SL +V+LT L + +L SW I + FH+ + + ++G Sbjct: 63 WIERFGIQYFMGIDGISLWLVLLTTFLTPIIILASWTSITERVKGFHVCMFILQTAMLGT 122 Query: 131 FLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAIL 190 FLA+D F+ FWE+ LVPMYF++ +WG G RI A KFFIYT A ++ML+AI+ Sbjct: 123 FLAMDAVFFYVFWELSLVPMYFMVGIWG-----GARRIYATVKFFIYTMAGSVLMLVAII 177 Query: 191 ALVFVHYNATGVWTFNYEEL--LNTPMSSGVEYLLM----LGFFIAFAVKMPVVPLHGWL 244 ++++ ATG + + + L P G + L F +AFA+K+P P+H WL Sbjct: 178 YMMYLTQEATGQMSASLLDFYQLQIPFVGGTFFSLQTLLFFAFALAFAIKVPAFPVHTWL 237 Query: 245 PDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWM 304 PDAH +APT GSV LAG++LK YG +R+ +PLFP AS +A + M +G +GI YGA + Sbjct: 238 PDAHVEAPTPGSVILAGVMLKMGTYGFMRWVIPLFPEASEYWAWLFMLIGTVGIIYGALV 297 Query: 305 AFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYE 364 A Q D+K+L+AY+SVSHMG++L+ ++ + G + QM+ HG+S LFIL G +YE Sbjct: 298 AMVQPDVKKLVAYSSVSHMGYILLGLFAFNAYGMGGGLYQMLNHGISTGALFILIGMIYE 357 Query: 365 RIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVI 424 R H+R++ GGL + ++++ +P T FVGEF IL G++Q PV Sbjct: 358 RTHSREISKYGGLAGVLPIFTIFFFIITLSSIAVPMTNGFVGEFFILLGTYQAHPVFAYF 417 Query: 425 STFGLVFASVYSLAMLHRAYFGKAKSQIASQELP--GMSLRELFMILLLVVLLVLLGFYP 482 + G+V +VY L M R +FG+ + + P ++ RE+ +++ LV+++ +G +P Sbjct: 418 AVSGVVLGAVYMLWMFKRVFFGEQGELVKDEHHPLHDLNAREITVLVPLVIMVFWMGLFP 477 Query: 483 QPILDTSHSAIGNIQQWFVN-SVTTTRP 509 L+ S ++I ++ N ++T +P Sbjct: 478 NHFLNFSKASIDHLVNNRSNYNLTIVQP 505 >UniRef50_Q7V4E4 NAD(P)H-quinone oxidoreductase chain 4 n=43 Tax=cellular organisms RepID=NU4C_PROMM Length = 563 Score = 300 bits (768), Expect = 8e-80, Method: Compositional matrix adjust. Identities = 201/508 (39%), Positives = 287/508 (56%), Gaps = 32/508 (6%) Query: 4 PWL---ILIPFIGGFLC--WQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSA 58 PWL IL P +G FL E G +V RW AL +T +++ +L G Y + S Sbjct: 26 PWLSLSILFPIVGAFLVPFIPDEGEGKQV-RWFALGIALVTFLITVAAYLYG-YDPSLSG 83 Query: 59 GIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHL 118 Q + W+P G++ + DG+S+ +++LT + LAVL +W K + FF L Sbjct: 84 ----LQLSERVSWLPDLGLTWAVGADGISMPLILLTSFITALAVLAAWPVTFKPKLFFFL 139 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 ++ + GG I VF DM LFF WE+ L+P+Y L+A+WG GK R AATKF IYT Sbjct: 140 -ILAMDGGQIAVFAVQDMLLFFLAWELELLPVYLLLAIWG-----GKKRQYAATKFIIYT 193 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 S L +L+ LA+ F G F Y L +G + L G IAF VK+P+V Sbjct: 194 AGSSLFILLVALAMGFF---GGGTPNFEYTNLAQQSFGTGFQLLCYAGLLIAFGVKLPIV 250 Query: 239 PLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 PLH WLPDAH +A + LAGILLK Y L+RF+ L P A A+FAP+ + LGV+ I Sbjct: 251 PLHTWLPDAHGEATAPVHMLLAGILLKMGGYALMRFNAQLLPEAHAQFAPLLIVLGVVNI 310 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFIL 358 Y A +FAQ ++KR IAY+S+SHMGFVLI I + S L GA++QMI+HGL A LF L Sbjct: 311 IYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFSALGTSGAMLQMISHGLIGASLFFL 370 Query: 359 CGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFG----- 413 G Y+R HT + MGG+ KM+ + AL A+A+L +PG FV E M+ G Sbjct: 371 VGATYDRTHTLQLEEMGGVGQKMRIMFALWTVCALASLALPGMSGFVSELMVFVGFATDE 430 Query: 414 ----SFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQ-ELPGMSLRELFMI 468 +F++ VI ++ G++ +Y L+ML +FGK Q+ S L RE+++I Sbjct: 431 AYTLTFRI--VIAGLAAIGVILTPIYLLSMLREIFFGKENDQLVSHTNLVDAEPREVYII 488 Query: 469 LLLVVLLVLLGFYPQPILDTSHSAIGNI 496 L+V ++ +G YP+ + D+ ++I + Sbjct: 489 SCLLVPIIGIGLYPRLMTDSYTASIQEL 516 >UniRef50_D2R5F8 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5F8_9PLAN Length = 600 Score = 299 bits (766), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 188/470 (40%), Positives = 265/470 (56%), Gaps = 39/470 (8%) Query: 7 ILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLA-LSLQLWLQGGYSLTQSAGIPQWQS 65 + +P G L W G R+ AL G+TLA L + + + G + Sbjct: 9 VFLPLAGAILMWILAPLGKNAVRFGAL---GVTLATLVCTAIVVASFPADGAKG-----A 60 Query: 66 EF---DMPWIPRFG----ISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHL 118 EF D PW+ + G I LA+DGL L M L+ LL V AVL SW+ I++ + F Sbjct: 61 EFCTVDWPWLAQSGSLLDIRFSLALDGLGLWMFGLSALLMVTAVLVSWEAIKEREALFFG 120 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 L+ + G +GVF A D+ LF+ F+E L+P++FLI +WG + R AA+KFF+YT Sbjct: 121 MLLLLEFGCLGVFTARDLILFYVFFEFTLIPLFFLIGIWGSE-----DRKYAASKFFLYT 175 Query: 179 QASGLVMLIAILALVFVHYNATGV--WTFNYEELLNT----PMSSGVEYLLMLGFFIAFA 232 A L+ + +L +V Y GV F+ EL T P+ + + + F FA Sbjct: 176 LAGSLLTFLGLLVIVVWCYQQEGVGKLVFSIPELTATLRDAPLPPAWQLAVFIALFAGFA 235 Query: 233 VKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMW 292 +K+P+ PLH WLP AH QAPTAGSV LAG+LLK YG LRFS+P+ P+A+ P +W Sbjct: 236 IKVPLFPLHTWLPLAHVQAPTAGSVILAGVLLKIGVYGFLRFSVPMLPDATVTCMPYLLW 295 Query: 293 LGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSA 352 L VIGI YGA +A AQ D+KRLIAY+SVSH+G+ + ++ + L QG+V+QM+ HGLS Sbjct: 296 LSVIGIIYGALVALAQGDMKRLIAYSSVSHLGYCTLGLFALNPLGVQGSVLQMVNHGLST 355 Query: 353 AGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILF 412 GLF + G LYER HTR+++ +GGL + WL L F +++G+PG F GEFMIL Sbjct: 356 GGLFAVIGMLYERYHTREIKQLGGLARQTPWLSFFMLIFTFSSIGLPGLNGFPGEFMILL 415 Query: 413 GSFQV------------VPVITVISTFGLVFASVYSLAMLHRAYFGKAKS 450 G FQ + I V++ G+V + Y L ++ +FG K Sbjct: 416 GMFQRAWAQSSVENFSQLMTIAVLAVTGVVLGAWYMLWLVQHVFFGPLKE 465 >UniRef50_A1KRT7 NADH dehydrogenase chain M n=30 Tax=Proteobacteria RepID=A1KRT7_NEIMF Length = 498 Score = 297 bits (761), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 166/454 (36%), Positives = 267/454 (58%), Gaps = 27/454 (5%) Query: 48 LQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWK 107 L GGY T EF WIP I+ L +DG+S+L ++L + +L VL W+ Sbjct: 58 LSGGYQFT----------EFH-EWIPLLKINYALGVDGISVLFIILNAFITLLVVLAGWE 106 Query: 108 EIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTR 167 I+K + + + G + G F A D LF+ F+E ML+P+Y +I +WG G R Sbjct: 107 VIQKRPAQYMAAFLMMSGLINGAFAAQDAILFYVFFEGMLIPLYLIIGVWG-----GPRR 161 Query: 168 ITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGF 227 + A+ K F+YT L+ML+A +V+++Y +++ + P+ GV+ LL F Sbjct: 162 VYASVKLFLYTLMGSLLMLVA---MVYLYYQTGSFSIVDFQNIKQIPL--GVQQLLFAAF 216 Query: 228 FIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFA 287 F++FAVK+P+ P+H WLPDAH +APT GS+ LA I LK AYG LRF LP+ P+A+ FA Sbjct: 217 FLSFAVKVPMFPVHTWLPDAHVEAPTGGSMVLAAITLKLGAYGFLRFILPIMPDAARYFA 276 Query: 288 PIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIA--IYTGSQL---AYQGAV 342 P+ + L +I + Y +A QTD+K+L+AY+S+SHMGFV + ++ QL A +GA+ Sbjct: 277 PVIIVLSLIAVIYIGMVALVQTDMKKLVAYSSISHMGFVTLGMFLFVNGQLNDWALKGAI 336 Query: 343 IQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTG 402 IQMI+HG +A +F+ G +Y+R+HTR++ GG+ + M A + F +A G+P T Sbjct: 337 IQMISHGFVSAAMFMCIGVMYDRLHTRNIADYGGVVNVMPKFAAFMMLFGMANAGLPATS 396 Query: 403 NFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSL 462 FVGEFM++ G+ +V + ++ L++ + Y+L M R FG + + E+ ++ Sbjct: 397 GFVGEFMVIMGAVKVNFWVGALAAMTLIYGASYTLWMYKRVIFGAIHNPHVA-EMKDINC 455 Query: 463 RELFMILLLVVLLVLLGFYPQPILDTSHSAIGNI 496 RE ++ +L V+++ +G YP ++ H A ++ Sbjct: 456 REFAILAILAVVVLGMGLYPNAFIEVVHQAANDL 489 >UniRef50_C1DT37 NADH-quinone oxidoreductase subunit m (Nadhdehydrogenase i subunit m) (Ndh-1 subunit m) n=10 Tax=Aquificales RepID=C1DT37_SULAA Length = 502 Score = 297 bits (760), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 173/424 (40%), Positives = 252/424 (59%), Gaps = 16/424 (3%) Query: 71 WIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGV 130 WIP+FGI+ + +D LSL MV LT + V+A + S IEK + + + + IGV Sbjct: 72 WIPQFGINYEVGVDALSLTMVWLTAISFVVAFIWS-TNIEKRIKEYFVAFLVLEAACIGV 130 Query: 131 FLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAIL 190 F+A D+ F+ FWE+ML+PM+ +I +WG+ RI AATKFFIYT L +LI ++ Sbjct: 131 FVAWDLVAFYVFWEVMLIPMFLIIGVWGYA-----ERIYAATKFFIYTFFGSLFLLIGVI 185 Query: 191 ALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQ 250 + +Y V + +Y +LL + +E + L + FA+K+P+ P H WLP AH Q Sbjct: 186 GMYIYNYMENNVLSMSYFDLLKLSLPHNLEIIFFLLLALGFAIKVPMWPFHTWLPAAHVQ 245 Query: 251 APTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTD 310 APTAGSV LA +LLK YG +RF+LP FP AS F P+ LGVI I Y A MA AQT Sbjct: 246 APTAGSVILAAVLLKMGTYGFVRFNLPWFPEASKYFVPVMFALGVIAIIYTAMMAIAQTH 305 Query: 311 IKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRD 370 IKRLIAY+SVSHMGFV I + + GA+I MI+HGL++ LF+ G +YER+H+ + Sbjct: 306 IKRLIAYSSVSHMGFVTIGTFALNTEGVNGAIITMISHGLTSGALFLAAGFIYERLHSYE 365 Query: 371 MRMMGGLWSKMKWLPALSLFF---AVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTF 427 M+ +GG+ K++P + F A+A+ G+PG FVGEF+ L G+F+V + ++ Sbjct: 366 MKDLGGM---AKFVPVFATLFMISAMASAGLPGLSGFVGEFLALLGTFKVSILTAALAGL 422 Query: 428 GLVFASVYSLAMLHRAYFGKAKSQIAS----QELPGMSLRELFMILLLVVLLVLLGFYPQ 483 LV + Y+L + R F + L ++ EL+ L LV+ + ++G YP+ Sbjct: 423 SLVVGAAYTLWLYKRTMFEEELLTEEKKKEYSHLKDLNTAELWSFLPLVIFMFVIGIYPK 482 Query: 484 PILD 487 +D Sbjct: 483 WWID 486 >UniRef50_A9F578 NADH dehydrogenase I chain M n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F578_SORC5 Length = 754 Score = 296 bits (759), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 189/503 (37%), Positives = 285/503 (56%), Gaps = 40/503 (7%) Query: 11 FIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMP 70 F+ L ++ +R K+ R + ++ MG+ L L+ L+ Q T++ G +Q Sbjct: 210 FLAHLLRYRDDR---KL-RLMTVVLMGVNLVLAAWLYAQFDRGFTRADGNDGYQFIEHGV 265 Query: 71 WIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHL-NLMWILGGVIG 129 WI + + +DG+S+ MV+LT L+ + L S+ ++ +G+F + NL+ + G+ G Sbjct: 266 WIRSLNVEYFVGVDGVSISMVLLTALISFVGALASYSVHDQLKGYFAMYNLL--VTGMFG 323 Query: 130 VFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAI 189 VF+A+D+FLFF FWE+ML+PMYFLI +WG G R AA KFF+YT A + ML Sbjct: 324 VFIALDLFLFFVFWEVMLLPMYFLIGIWG-----GPRREYAAIKFFLYTLAGSVFML--- 375 Query: 190 LALVFVHYNATGVWTFN---YEELLNTPMSSGVEY----LLMLG----------FFIAFA 232 LA ++ + NA + + E + + P S V + L +LG F+ FA Sbjct: 376 LAFIWFYLNAGHTYLVDGQATERIFSIPELSRVAWAAQGLTILGVAAVKVVWIWLFVGFA 435 Query: 233 VKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMW 292 +K+P+ P H WLPDAH +APTA SV LAG+LLK YG+LR + L P A+ AP Sbjct: 436 IKIPMFPFHTWLPDAHVEAPTAISVILAGVLLKMGTYGILRINFTLLPEATQWAAPAMAV 495 Query: 293 LGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSA 352 GV+ I YGA+ A AQ+D+K+L+AY+SVSHMGF L+A+ + Q ++QM HGL Sbjct: 496 FGVVNILYGAFCAMAQSDLKKLVAYSSVSHMGFTLLALGAMTPQGIQACLVQMFNHGLIT 555 Query: 353 AGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILF 412 LF L G +Y+R+HTRD+ GGL S+M AL F +A+LG+PG F GE M Sbjct: 556 GMLFTLVGVVYDRVHTRDIDRFGGLASEMPLYTALVGFAFMASLGLPGLSGFWGEAMTFI 615 Query: 413 GSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQ--------ELPGMSLRE 464 G+F +T+++ G++ + Y L L R + G ++ + P +S RE Sbjct: 616 GAFPRYRALTILAAVGVILTAAYHLWALQRMFLGTFRASWRQSKYLEPFGGKFPEISGRE 675 Query: 465 LFMILLLVVLLVLLGFYPQPILD 487 L I L L+++LGF+P+P+L Sbjct: 676 LASIAPLAALVLVLGFWPRPLLS 698 >UniRef50_A0B819 F420H2 dehydrogenase subunit M n=2 Tax=Methanosarcinales RepID=A0B819_METTP Length = 502 Score = 296 bits (758), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 185/503 (36%), Positives = 275/503 (54%), Gaps = 22/503 (4%) Query: 6 LILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQS 65 +I +P +G L + T G R +ALI + LAL+LQ++ + +S+ + Q+ Sbjct: 9 MIAVPLVGAVLAFLTRSRGQA--RLVALIASLVPLALALQMYTE----FDKSSKLMQFVE 62 Query: 66 EFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILG 125 +D W+P G+ + +D +S +V+LT ++ VL V+ +W E + FF L L+ +G Sbjct: 63 SYD--WVPSIGVRYTVGVDCISFPLVLLTAIVSVLVVIYAWGENHRPNQFFALLLLNEVG 120 Query: 126 GVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVM 185 V+GVF A+D FLF+ FWE++L+PM+FLI +WG G + +A KFFIYT + LVM Sbjct: 121 -VLGVFTALDFFLFYIFWEIVLIPMFFLIGIWG-----GPRKDYSAIKFFIYTHVASLVM 174 Query: 186 LIAILALVFVHYNATGVWTFNYEELL-----NTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 L+AI A+ F + G TF+ LL T G+ + G F VKMP P Sbjct: 175 LLAIFAMYFTYRLPDGSRTFDMLTLLQATSDKTVFPPGLINAIFAGLLFGFLVKMPAFPF 234 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H WLPDAH +APTAGSV LA +LLK YG+ R LP+ P+ F + +GV+ I Y Sbjct: 235 HTWLPDAHVEAPTAGSVVLAALLLKMGGYGIFRVILPMLPHVDKAFVTVIAVIGVLSIIY 294 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 GA++A AQ DIK+L+AY+S+SHMGFV + + L+ QGA+ Q +HG+ LF+ G Sbjct: 295 GAFLALAQKDIKKLVAYSSISHMGFVTLGAVAFTWLSIQGAMFQQFSHGIITCALFMSAG 354 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 + + TR + +GGL +M +L L +A+LG+PG FV EFM+L GS+ PV Sbjct: 355 TIQHSVGTRIISELGGLADRMPKFASLMLAAFLASLGLPGMSGFVAEFMVLTGSYPTFPV 414 Query: 421 ITVISTFGLVFASV-YSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLG 479 T++ F V + Y L + FG + P E+ + +V L +L G Sbjct: 415 YTMLVVFTSVGVTAGYHLWACQKVLFGPILKKYLDLHDP--HAYEILAMSAIVFLTLLFG 472 Query: 480 FYPQPILDTSHSAIGNIQQWFVN 502 P I D +A + + V Sbjct: 473 LQPALITDMMGTAAHQVMEPVVT 495 >UniRef50_Q1ZRW3 NADH dehydrogenase I, M subunit n=2 Tax=Photobacterium RepID=Q1ZRW3_PHOAS Length = 500 Score = 296 bits (758), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 179/494 (36%), Positives = 280/494 (56%), Gaps = 20/494 (4%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQG---GYSLTQSA 58 +L LI +P + L + R + R + L T+ + L +++ G+S+T+S Sbjct: 1 MLSLLIFLPMVAALLIGSSCRKLPFIARSMTLTTLIIESMLVAWIFITHQVHGFSMTES- 59 Query: 59 GIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHL 118 + WIP FGI +++DG+SL ++ LT L ++A+L +W ++ ++Q F L Sbjct: 60 ----------LNWIPDFGIKYLVSMDGISLSLIGLTCTLFIVAMLVAWHQVNRWQAFGPL 109 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 L+ L G++G FLA+D+ LF+ FWE+ML+P+YF+++ WG GK AA KF + T Sbjct: 110 MLL-TLSGIMGAFLALDLMLFYVFWELMLIPIYFMLSFWG-----GKDTKQAALKFVLVT 163 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 L+ML++++AL ++ N TGVWTF+Y L + P+ + ++ GF IAF +K+P Sbjct: 164 ITGSLLMLVSLVALYIINGNNTGVWTFDYFYLASHPIMGELAIPVVCGFLIAFLIKIPGF 223 Query: 239 PLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 P H W PD + + A S+ L+G++ AYG+LRF L +FP A + I M LG IG Sbjct: 224 PFHFWAPDTYREGAPAVSLLLSGVMANVGAYGILRFCLAIFPEAMHQMMYIGMALGAIGS 283 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFIL 358 Y A +AF Q D++ +IAY+S+SHM V++AI+ A GAVIQ+IAHGLS AGLF + Sbjct: 284 LYAALLAFRQKDLRNVIAYSSISHMNLVVLAIFAWQLQALNGAVIQLIAHGLSVAGLFAV 343 Query: 359 CGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVV 418 L R + MGGL+ + + LF A++G+PG GNF GE ++L GSF V Sbjct: 344 VRMLQARGFSGKFDEMGGLYKVLPGIGVFLLFIVAASVGIPGLGNFAGEILLLAGSFSVS 403 Query: 419 PVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLL 478 P+ T ++ F +V VY L A+ G ++L ++ RE ++V+ L + Sbjct: 404 PLWTSLAAFSIVLGVVYFLRAYGLAFLGPISDDNEQRKLIDLTAREKLTASIIVIGLFWV 463 Query: 479 GFYPQPILDTSHSA 492 G P +L S+ Sbjct: 464 GLEPNYLLQLMMSS 477 >UniRef50_Q057W4 NADH dehydrogenase I chain M n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=Q057W4_BUCCC Length = 412 Score = 295 bits (754), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 168/412 (40%), Positives = 256/412 (62%), Gaps = 3/412 (0%) Query: 90 MVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVP 149 M+VLT + G+ +V C W +K G F+ L+ I+ G+ G+FL++D+FLFF FWEM+L+P Sbjct: 1 MIVLTSIFGLFSVFCEWHSKQKNSGIFYSFLLLIISGMFGIFLSLDLFLFFLFWEMILIP 60 Query: 150 MYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEE 209 +YFLI WG+ + K I A KFFIY+Q SG ++L I+ LV HYN + +WTF+Y Sbjct: 61 LYFLIVFWGNINKNKKNNIFIAHKFFIYSQLSGCMLLFFIINLVCCHYNYSKIWTFDYFL 120 Query: 210 LLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAY 269 L NTP+S E+ LM ++F +K+P++P H WLPD PT S+DL GILLK A Y Sbjct: 121 LKNTPVSLFTEFFLMFFLLLSFIIKIPLIPFHSWLPDVQECLPTTNSIDLIGILLKPAIY 180 Query: 270 GLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIA 329 G+LRF+L FP++S F+ M G++ YG+ MAF+Q +IK+ IAY+S+S MG + + Sbjct: 181 GILRFNLIFFPHSSYLFSRFFMIFGLLSTLYGSIMAFSQKNIKKFIAYSSISSMGIIFSS 240 Query: 330 IYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSL 389 IY+ + ++QG ++ + ++ +S A L I+ G+++ I+T+ + MGGLW+ M+++P+ L Sbjct: 241 IYSFNFFSHQGIILYLFSYCISTAALLIIIGKIFSHIYTQKIFKMGGLWNYMRFIPSFFL 300 Query: 390 FFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAK 449 FF + L +P +GNF GEFM+LFG F P + L F+S+YSL + + +G Sbjct: 301 FFIFSNLNIPMSGNFGGEFMMLFGIFSSFPFLGYFFILNLFFSSIYSLVTIQKVCYGLNN 360 Query: 450 SQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFV 501 + EL L LV ++ LG YP IL+ S + NI Q ++ Sbjct: 361 NFFIKHELSFFDFFIL---FFLVFMIFFLGLYPSLILNFSFNIQKNIFQHYI 409 >UniRef50_C6BS86 Proton-translocating NADH-quinone oxidoreductase, chain M n=8 Tax=Bacteria RepID=C6BS86_DESAD Length = 511 Score = 292 bits (748), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 183/480 (38%), Positives = 280/480 (58%), Gaps = 25/480 (5%) Query: 23 FGVKVPRWIALITMGLTL-ALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHL 81 F +K I + T+G+++ L+L L G+ L +A +Q M W+ ++G+ +L Sbjct: 24 FFLKGDNTIRMYTLGVSIIELALSFPLFAGFKLESAA----FQFVERMDWVKQWGVEYYL 79 Query: 82 AIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFF 141 DG+S LMVVLT + L VLCSW I+ FH L+++ +GVF A+D+ LF+ Sbjct: 80 GTDGISFLMVVLTIAVLPLCVLCSWTYIQTRVKEFHFCLLFMTAACVGVFTALDLVLFYV 139 Query: 142 FWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATG 201 FWE ML+PMY LIA+WG G + A+ KFF+YT A ++L+AI+A A G Sbjct: 140 FWEAMLIPMYLLIAVWG-----GPEKRYASLKFFLYTLAGSALLLVAIVAFRI----AGG 190 Query: 202 VWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAG 261 TF EL+ + ++ L +AFA+K+P+ P H WLP AH QAPTAGSV LA Sbjct: 191 --TFAIPELMEQNFAFNFQFWAFLALALAFAIKVPMFPFHTWLPAAHVQAPTAGSVILAS 248 Query: 262 ILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVS 321 +LLK YG LRF+LPL P AS FAP + + + GI YG +A Q DIK++IAY+SV Sbjct: 249 VLLKMGTYGFLRFNLPLTPAASEYFAPFMIAISIAGILYGGIVALGQNDIKKVIAYSSVG 308 Query: 322 HMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKM 381 HMGFV + I+ +Q +GA+ QM+ HG++ GLF++ G +YER H+R++ GL Sbjct: 309 HMGFVTLGIFLFNQRGLEGALFQMLNHGITTGGLFMMIGAVYERSHSRELDDNLGLG--- 365 Query: 382 KWLPALSLF---FAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLA 438 K++PA F FA+++ G PGT +FVGE ++ G+F+ P I + G + A+ Y L Sbjct: 366 KYMPAYMFFWGLFALSSFGFPGTNSFVGEILVFVGAFEQNPWIGALMVPGAMVAAAYMLR 425 Query: 439 MLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQ 498 + + +G+ S +E P ++LRE +++ V ++ +G P +++ +++ Sbjct: 426 VSLKLAWGRPTSW---KEWPDLNLREWTYLVIPAVFVLYIGLAPGLCFKVMDASLIKLEK 482 >UniRef50_D1AZ50 Proton-translocating NADH-quinone oxidoreductase, chain M n=3 Tax=Campylobacterales RepID=D1AZ50_SULD5 Length = 508 Score = 292 bits (747), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 166/421 (39%), Positives = 270/421 (64%), Gaps = 14/421 (3%) Query: 71 WIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGV 130 +IP +G+S +L +DG+SL +V+L+ + ++A++ IEK ++++++ ++GV Sbjct: 64 FIPSYGMSYYLGVDGISLFLVILSTFITMIALIA--LSIEKDVKNLIISVLFLEMTMVGV 121 Query: 131 FLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAIL 190 FL +D+ F+ FWE+ LVPM ++I WG G+ R+ AA KFF+YT A ++ML+ IL Sbjct: 122 FLILDVIWFYAFWELSLVPMLYIIGGWG-----GEKRMYAAIKFFLYTFAGSVLMLVGIL 176 Query: 191 ALVFVHYNATGVWTFNYEE--LLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAH 248 + F++Y ATG+W+F + LL P ++ + L FF+ FA+K+P+ P H WLP AH Sbjct: 177 YMGFLYYEATGIWSFALPDWHLLQVPFTT--QLWLFGAFFLGFAIKVPMFPFHTWLPYAH 234 Query: 249 SQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEF-APIAMWLGVIGIFYGAWMAFA 307 QAPT GS+ LA +LLK +YG +RFSLPLFP+AS F P+A+ + VI + Y A +A+A Sbjct: 235 GQAPTIGSIILAAVLLKMGSYGFVRFSLPLFPDASVYFLIPVAI-ICVIMVIYAAMIAYA 293 Query: 308 QTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIH 367 Q D+K++IAY+S+SHMG V++ + + G++ M++HG+ + LF+L G +Y+R H Sbjct: 294 QDDMKQVIAYSSISHMGIVILGTFAMNAEGITGSIFLMLSHGIVSGALFMLVGVIYDRRH 353 Query: 368 TRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTF 427 T+ M GGL M + +A++G+P T FVGEF+ L G ++V VIT+ + Sbjct: 354 TKLMSQFGGLAQVMPRFATIYGIMLMASVGLPLTIGFVGEFLSLMGFYRVSWVITLFAGT 413 Query: 428 GLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILD 487 G++ +VY L + +++FG + ++ L +S +EL ++ LV L+V LG YP+P+L Sbjct: 414 GIILGAVYMLVLYKKSFFGAVVHE-ENRGLKDLSAKELTALIPLVALVVALGVYPKPLLS 472 Query: 488 T 488 T Sbjct: 473 T 473 >UniRef50_C4XGW9 NADH-quinone oxidoreductase chain M n=3 Tax=Desulfovibrionales RepID=C4XGW9_DESMR Length = 523 Score = 290 bits (742), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 179/439 (40%), Positives = 254/439 (57%), Gaps = 19/439 (4%) Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 P +Q W+P G++ HL +DGLSL M++LT L+ L VL SW I K FH+ L Sbjct: 58 PAFQFVEKADWLPALGMTYHLGVDGLSLYMILLTALMLPLCVLGSWTYIAKRVTEFHVCL 117 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + + IGVF A+D LF+ FWE MLVPMY LIA+WG G R A+ KFF+YT A Sbjct: 118 LLMTASCIGVFAALDFVLFYVFWEAMLVPMYLLIAVWG-----GPRRRYASIKFFLYTLA 172 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 ++L AI+A + G TF+ EL+ + ++ L +AFA+K+P+ P Sbjct: 173 GSTLLLAAIVA-----FRQVG-GTFSIPELMEKSYAFKFQFWAFLAMALAFAIKVPMFPF 226 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H WLP AH +AP AGSV LA ILLK YG LRF LPL P A+ FAP+ + + + GI Y Sbjct: 227 HTWLPAAHVEAPAAGSVLLAAILLKMGTYGFLRFCLPLTPAAAETFAPLLIAVSIAGIIY 286 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 G +A QTDIK+LIAY+SV HMGFV + I+ S GA++QM+ HG++ GLF++ G Sbjct: 287 GGCIALGQTDIKKLIAYSSVGHMGFVTLGIFLFSVKGVSGAILQMLNHGITTGGLFMMIG 346 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAV---ATLGMPGTGNFVGEFMILFGSFQV 417 LYER H+R++ GL K++PA F V ++L PGT +F+GE ++L G+FQ Sbjct: 347 LLYERSHSREIADNQGLG---KFMPAFMFLFGVFSLSSLAFPGTNSFIGEVLVLIGAFQG 403 Query: 418 VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVL 477 P + + G + A+ Y L +L R +G+ + S + LRE + L +L+ Sbjct: 404 NPWVGFAAVPGAMLAAAYMLRLLQRVTWGEPAAYKPSWG--DLGLREWVTLAPLGILVFY 461 Query: 478 LGFYPQPILDTSHSAIGNI 496 +G P + T +I + Sbjct: 462 IGLAPALCIKTIEPSITRV 480 >UniRef50_B5YKJ1 NADH-quinone oxidoreductase chain m n=15 Tax=cellular organisms RepID=B5YKJ1_THEYD Length = 538 Score = 289 bits (739), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 197/509 (38%), Positives = 301/509 (59%), Gaps = 25/509 (4%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L LI P G L R ++ ++ ALI + S+ L++ ++ T S Sbjct: 47 ILSTLIFFPVAGAALIAIIPRDKEELIKFSALIISIVEFIFSIPLYIS--FNKTTS---- 100 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q Q + + WIP +GI +L +DG+S+L ++L+ LL +L V SWKEI++ F+ L+ Sbjct: 101 QMQFKEEHLWIPEWGIKYYLGVDGISILFILLSSLLTILCVTVSWKEIDRKIKEFYAALL 160 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 +IGVF+++D+FLF+ FWE ML+PMY +I +WG G RI +A KFF+YT Sbjct: 161 ITHSAMIGVFMSLDIFLFYIFWEAMLIPMYLIIGIWG-----GPRRIYSAIKFFLYTFIG 215 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 ++ML+ IL L F TG T + L+ ++ L FF AFAVK+P+ P+H Sbjct: 216 SVLMLVGILVLYF----HTG--TSDILSLMKNSYPYKMQLWLFWAFFAAFAVKVPMWPVH 269 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLPDAH++APTAGSV LAG+L+K AYG LRF+LP+FP A+ P M L VI I YG Sbjct: 270 TWLPDAHTEAPTAGSVILAGVLIKMGAYGFLRFNLPMFPEATLAMKPFMMILSVIAIIYG 329 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 A + Q D+KRLIAY+SVSHMGFV + I+ +Q QG +IQM+ HG+ LF+ G Sbjct: 330 ALICLIQKDLKRLIAYSSVSHMGFVTLGIFALNQQGIQGGIIQMLNHGVVTGALFLCIGI 389 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 +Y+R HTR + GG+ + M A + F +A++G+PGT F+GEF+IL G+F+ ++ Sbjct: 390 VYQRTHTRQIAHYGGVATVMPAYSAFFMIFTLASIGLPGTNGFIGEFLILLGTFKAWKLM 449 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPG---MSLRELFMILLLVVLLVLL 478 +++ L+ + Y L + R +F K + Q + G ++ RE+ +L LV++++ + Sbjct: 450 CILAATALIIGAAYMLWLYQRVFFEKTNPEFL-QHIHGYSDLNSREIVTLLPLVLVVLWI 508 Query: 479 GFYPQPILDTSHSAIGNIQQWFVNSVTTT 507 GFYP +L ++ + +N VT + Sbjct: 509 GFYPNALLSFMDVSVKEL----INHVTQS 533 >UniRef50_B8DS13 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DS13_DESVM Length = 519 Score = 288 bits (736), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 175/431 (40%), Positives = 251/431 (58%), Gaps = 20/431 (4%) Query: 69 MPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVI 128 M W+ R+G+ HLA+DG+S+LMV LT L VLCSW I K FH+ L+ + I Sbjct: 64 MTWVARWGLEYHLAVDGISILMVWLTLFTLPLCVLCSWTYIGKRVKEFHICLLLMTSACI 123 Query: 129 GVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIA 188 GVF ++D+ LF+ FWE ML+PMY LIA+WG G R A+ KFF+YT A ++L+A Sbjct: 124 GVFTSMDLVLFYVFWEAMLIPMYLLIAVWG-----GAERRYASIKFFLYTLAGSTLLLVA 178 Query: 189 ILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAH 248 I+A A G TF+ +L+ +Y L +AFA+K+P+ P H WLP AH Sbjct: 179 IVAFRI----AGG--TFSIPDLMQQTFGFRFQYWAFLAMALAFAIKVPMFPFHTWLPAAH 232 Query: 249 SQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQ 308 QAP+AGSV LA +LLK YG LRF LPL P AS FAP+ + + V+ I YG +A Q Sbjct: 233 VQAPSAGSVILAAVLLKMGTYGFLRFCLPLTPEASVHFAPLMIGVSVVSILYGGAVALGQ 292 Query: 309 TDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHT 368 TDIK+L+AY+SV+HMGFV + I+ + QGA++QM+ HG+ LF++ G +YER H+ Sbjct: 293 TDIKKLVAYSSVAHMGFVTLGIFLFQKSGVQGALLQMLNHGIVTGALFMMIGAMYERSHS 352 Query: 369 RDMRMMGGLWSKMKWLPALSLF---FAVATLGMPGTGNFVGEFMILFGSFQVVPVITVIS 425 R++ G+ K+LPA F +A+A+ G PGT FVGE ++ +FQ + + Sbjct: 353 REVADNMGMG---KYLPAFMFFWGLYALASFGFPGTNGFVGEVLVFVAAFQQSLTVGALI 409 Query: 426 TFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPI 485 G + A+ Y + R +G + +L + RE +LL VL++ +G P P Sbjct: 410 VPGALLAAAYMFRVSLRMAWGSPSTAKTWNDL---NRREWAYLLLPAVLVLWIGLAPAPF 466 Query: 486 LDTSHSAIGNI 496 L +I + Sbjct: 467 LRLIDPSIDRL 477 >UniRef50_D2L5S8 Proton-translocating NADH-quinone oxidoreductase, chain M n=2 Tax=Bacteria RepID=D2L5S8_9DELT Length = 526 Score = 287 bits (735), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 196/505 (38%), Positives = 274/505 (54%), Gaps = 37/505 (7%) Query: 6 LILIPFIGGF--LCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQW 63 LI++P I L W+ + + +V +TLA + L L+ S P + Sbjct: 13 LIVLPLIAALVLLVWRRDEWTTRV----------VTLATGILECLLALPLLSYSPSGPAF 62 Query: 64 QSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWI 123 Q W+P G++ HL +DGLSL MV+LT L+ L VL SW I K FH L+ + Sbjct: 63 QFVEKAQWLPAMGMTYHLGLDGLSLYMVLLTALMLPLCVLGSWTYISKRVTEFHFCLLLM 122 Query: 124 LGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGL 183 IGVF A+D LF+ FWE MLVPMY LIA+WG G R A+ KFF+YT A Sbjct: 123 TSACIGVFAALDFVLFYVFWEAMLVPMYLLIAVWG-----GPRRRYASIKFFLYTLAGST 177 Query: 184 VMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGW 243 ++L AI+A + G TF+ EL+ S + L +AFA+K+P+ P H W Sbjct: 178 LLLAAIVA-----FRQVG-GTFSIPELMEKSYSFKFQIWAFLAMALAFAIKVPMFPFHTW 231 Query: 244 LPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAW 303 LP AH +AP AGSV LA ILLK YG LRF LPL P AS API + + V I YG Sbjct: 232 LPAAHVEAPAAGSVLLAAILLKMGTYGFLRFCLPLTPAASVTAAPIMIAISVASILYGGC 291 Query: 304 MAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLY 363 +A QTDIK+LIAY+SV HMGFV + I+ S GA++QM+ HG++ GLF++ G LY Sbjct: 292 IALGQTDIKKLIAYSSVGHMGFVTLGIFLLSVKGVSGAILQMLNHGITTGGLFMMVGLLY 351 Query: 364 ERIHTRDMRMMGGLWSKMKWLPALSLFFAV---ATLGMPGTGNFVGEFMILFGSFQVVPV 420 ER H+R++ GL K++PA F + ++L PGT +FVGE ++L G+F P Sbjct: 352 ERSHSREIVDNQGLG---KFMPAFMFLFGLFSFSSLAFPGTNSFVGEILVLIGAFAGNPW 408 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 I + G + A+ Y L +L R +G+ S + +RE + L +L+ +G Sbjct: 409 IGFAAVPGAMLAAAYMLRLLQRVTWGE-PSSFKKGSWRDLGVREWLTLAPLALLVFYIGL 467 Query: 481 YP-------QPILDTSHSAIGNIQQ 498 P +P ++ + SA+ Q Sbjct: 468 APALAITTIEPSIERTLSALHAKNQ 492 >UniRef50_B0SFU4 NADH dehydrogenase (Ubiquinone), M chain n=6 Tax=Leptospira RepID=B0SFU4_LEPBA Length = 579 Score = 286 bits (733), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 190/513 (37%), Positives = 293/513 (57%), Gaps = 36/513 (7%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L +I +P + FL +R G V I+ ++ T LSL L+ + AG+ Sbjct: 5 ILSIIIFLPIVSTFLIVIQKRVGAVV--VISALSSAFTTILSLGLFF---FYDASKAGL- 58 Query: 62 QWQSEFDMPWIP------RFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF 115 +F + WIP + + H+ +DG+SLL+ LT + L+ + SW I K Sbjct: 59 ----QF-VHWIPDWILSGKLSVDYHVGLDGVSLLLFALTTFMFFLSSIASWSNIPKKIKE 113 Query: 116 FHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFF 175 FH+ L+ + V+GVF + ++ LF+ FWE+M++PM +I +WG G+ R AA K+F Sbjct: 114 FHICLLVLETAVLGVFASGNLVLFYVFWELMVLPMVLMIGIWG-----GEERTKAALKYF 168 Query: 176 IYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKM 235 +++ A L ML IL L F T + + + L S +++ L FF+AFA+K+ Sbjct: 169 LFSMAGSLFMLGGILTLYF-KTGKTSIESLSTASL--ALYSEPLQWFLFFSFFLAFAIKI 225 Query: 236 PVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGV 295 P+ P H W+PD H+QAPT GSVDLAG+LLK AYG +RF +P FP S L V Sbjct: 226 PLFPFHTWMPDVHTQAPTVGSVDLAGVLLKIGAYGFIRFCIPFFPEQSLLSQNGIQILAV 285 Query: 296 IGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGL 355 IGI YG+ A QTDIKR+IAY+S+SH+GF ++ I++ + G ++QM++HG+S + Sbjct: 286 IGIVYGSMAALVQTDIKRIIAYSSLSHLGFCILGIFSFTTEGVVGGMLQMVSHGISTGMI 345 Query: 356 FILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATL---GMPGTGNFVGEFMILF 412 F++ G +YER HTR++ GGL +M P S FF +A L G+PGT FVGEF+IL Sbjct: 346 FLMIGMIYERAHTRNISEFGGLAGQM---PVFSTFFLIAVLSSIGLPGTNGFVGEFLILI 402 Query: 413 GSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLV 472 G+ + + I+ G+V ++Y L + R FG +K+ I ++ +S RE+ ++ LV Sbjct: 403 GAIKSNVWLGGIAATGVVLGALYLLWFVKRFLFGVSKT-IQAKPYKDLSFREIGILSPLV 461 Query: 473 VLLVLLGFYPQPILDTSHSAIGNIQQWFVNSVT 505 VL+ +G YP+P L +S+ F+NS + Sbjct: 462 VLIFWIGLYPKPFLSILNSS----SNVFLNSAS 490 >UniRef50_Q37617 NADH-ubiquinone oxidoreductase chain 4 n=80 Tax=Eukaryota RepID=NU4M_PROWI Length = 523 Score = 286 bits (732), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 158/412 (38%), Positives = 246/412 (59%), Gaps = 11/412 (2%) Query: 81 LAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFF 140 L +DG+SL ++LT LL + +L SW IE Y + + + + ++ VF +D+ LF+ Sbjct: 115 LGVDGISLFFIILTTLLVPICILVSWNNIEVYVKEYCIAFLVLETLMLTVFSVLDLLLFY 174 Query: 141 FFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNAT 200 F+E +L+PM+ +I +WG + + +I AA +FF+YT ++ML+AIL + F T Sbjct: 175 IFFESVLIPMFIIIGVWGSR----ERKIRAAYQFFLYTLFGSVLMLLAILLIYF----QT 226 Query: 201 GVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLA 260 G T + E L + S + +L L FF +FAVK+P+VP+H WLP+AH +APTAGSV LA Sbjct: 227 G--TLDIEMLYLSDFSETRQCILWLAFFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILA 284 Query: 261 GILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSV 320 GILLK YG LRFS+PLFP A F P+ + VI I Y + Q D+K++IAY+SV Sbjct: 285 GILLKLGTYGFLRFSIPLFPYACIYFTPLIYTMSVIAIVYTSCTTIRQIDLKKIIAYSSV 344 Query: 321 SHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSK 380 +HM FV I +++ + +G+++ MI+HGL + LF+ G LY+R TR +R G Sbjct: 345 AHMNFVTIGLFSQNTQGIEGSILLMISHGLVSPALFLCVGVLYDRHKTRLLRYYSGCGQT 404 Query: 381 MKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAML 440 M L +FF +A + +PGT +F GEF++ GS+Q + + G+V + Y+L + Sbjct: 405 MPIFALLFVFFTMANISLPGTSSFPGEFLVFIGSYQNNSFVAFCAATGMVLGAAYALWLC 464 Query: 441 HRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSA 492 +R +G +K + ++ RE FM L+ ++ +G YP+P LD H + Sbjct: 465 NRLIYGVSKPDFINT-WSDVNRREFFMFAPLIAGILWIGVYPEPFLDAMHCS 515 >UniRef50_Q1DDD2 NADH dehydrogenase I, M subunit n=2 Tax=Cystobacterineae RepID=Q1DDD2_MYXXD Length = 577 Score = 286 bits (732), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 181/496 (36%), Positives = 270/496 (54%), Gaps = 50/496 (10%) Query: 29 RWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSL 88 R + I M L LA + W Y G P++Q E+ W FG S H+ +DGL++ Sbjct: 35 RTVTFIAMVLDLAFGV--WAYMAYV----PGGPEFQLEYRARWFDLFGTSYHIGVDGLAV 88 Query: 89 LMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLV 148 +++LT LG L VL S I+ FHL L+ + ++G +++D+ LF+ F+E ML+ Sbjct: 89 SLLLLTVFLGPLVVLASTTYIKFRIKEFHLALLVLQTTMLGALVSLDVLLFYIFFEAMLI 148 Query: 149 PMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYE 208 PMY L+ +WG + R AA KFF+YT A L+ML+AI+A+ F+ + G +F+Y Sbjct: 149 PMYLLVGVWG-----AEDRQMAAVKFFLYTLAGSLLMLVAIIAVYFIS-SPVGARSFDYA 202 Query: 209 ELLNTPMSSGVEYL--------------------------LMLGFFIAFAVKMPVVPLHG 242 + N + + + L F IAFAVK+P+ PLH Sbjct: 203 SIYNGLLDANRQLSACTAGPAGACDSLTGLAATLHTWGPWLFAAFAIAFAVKVPMWPLHT 262 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGA 302 WLPDAH QAP AGS+ LAG+ LK +G R+++P FP A+ + P L VIGI YGA Sbjct: 263 WLPDAHVQAPVAGSMILAGVTLKMGTFGFWRYAIPFFPVATQQARPFLATLAVIGIVYGA 322 Query: 303 WMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQL 362 M AQ DIK+LIAY+SVSH+G+ ++ I + G+ QM+ HG+S LF+L G L Sbjct: 323 LMCLAQRDIKKLIAYSSVSHLGYCMLGILAITAEGATGSAYQMLNHGVSTGALFLLFGYL 382 Query: 363 YERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ------ 416 YER H+R M GG+ M A + +++ +PGT F+GEF++L G+F+ Sbjct: 383 YERRHSRLMADYGGIAKVMPVFTAAFVIITFSSIAVPGTNGFIGEFLVLLGTFKSDLGEA 442 Query: 417 -----VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLL 471 + V +T G++ + Y L M+ + +FG + +Q L M+LRE +L Sbjct: 443 AGNPHLTAVFGAFATLGVILGAAYMLWMVQKVFFGGITHR-ENQHLTDMNLREGLTVLPF 501 Query: 472 VVLLVLLGFYPQPILD 487 +VL+ ++G PQP LD Sbjct: 502 IVLVAVMGLQPQPFLD 517 >UniRef50_Q0RRV6 NADH-quinone oxidoreductase chain M (NADH dehydrogenase I, chain M) (NDH-1, chain M) n=13 Tax=Actinomycetales RepID=Q0RRV6_FRAAA Length = 610 Score = 285 bits (729), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 160/391 (40%), Positives = 242/391 (61%), Gaps = 9/391 (2%) Query: 103 LCSWKEIEKYQG------FFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIAL 156 + + E+ + G FF L L+ + G+IGVF A D+FLF+ F+E ML+PMYFLI Sbjct: 176 VVTRDEVAERHGRRSVPAFFAL-LLALEAGMIGVFAATDVFLFYVFFEAMLIPMYFLIGS 234 Query: 157 WGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMS 216 +G + R AA KF +Y+ GL+ML A++ L V + G TF++ L ++ Sbjct: 235 YG-PVKEQAQRSYAAVKFLVYSLFGGLLMLAAVIGLYVVSADNLGHGTFDFATLRQMEIT 293 Query: 217 SGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSL 276 GV+ LL LGFF+AFA+K P+ P H WLPDA +Q+PT G+V L G+L K +GL+R+ + Sbjct: 294 PGVQKLLFLGFFVAFAIKAPLFPFHTWLPDAGAQSPTGGAVLLVGVLDKVGTFGLIRYCI 353 Query: 277 PLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQL 336 PLFP+A+ FAP+ + L V+GIFYGA +A Q D+KRL+AYTS++H GF+ + ++ + Sbjct: 354 PLFPDAADYFAPLVLGLAVVGIFYGALLAIGQRDMKRLVAYTSLAHFGFIALGLFAFTSQ 413 Query: 337 AYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATL 396 A GAV+ M+ HGLS LF++ G L R +RD+ GGL L + L +++L Sbjct: 414 AGTGAVLYMVNHGLSTGLLFLVVGFLVTRRGSRDVGAYGGLAKVTPVLAGVFLLAGLSSL 473 Query: 397 GMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQE 456 +PGT +FV EF++L G+F + +++T G+V A++Y L + R G + ++ Sbjct: 474 ALPGTNSFVSEFLVLVGTFTANKPLAIVATCGIVLAAIYVLYLYQRTMTGPVVHE-ENRV 532 Query: 457 LPGMSLRELFMILLLVVLLVLLGFYPQPILD 487 L + LRE ++ LV L+V LG YP+P+LD Sbjct: 533 LHDLGLREKVVVAPLVALIVALGVYPKPLLD 563 >UniRef50_C1ZFV0 NADH dehydrogenase subunit M n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZFV0_PLALI Length = 599 Score = 284 bits (726), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 168/438 (38%), Positives = 253/438 (57%), Gaps = 12/438 (2%) Query: 57 SAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFF 116 S PQ S P + +L +DGL + M++LT L V A+L SW EI + F Sbjct: 109 STSKPQDPSTARSPSGDFINLEFYLGLDGLGMAMILLTTGLCVSAILVSWSEIRERSAEF 168 Query: 117 HLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFI 176 + ++ + G+IGVFLA D+ LF+ F+E L+P++ I +WG G R AA KFFI Sbjct: 169 YAGILILEAGLIGVFLAYDLILFYAFFEFTLLPLFLTIGVWG-----GPKRRYAAGKFFI 223 Query: 177 YTQASGLVMLIAILALVFVHYNATGVWT-FNYEE----LLNTPMSSGVEYLLMLGFFIAF 231 YT A LVML+ +++LV + TG+ T F+ + L + P+ + +L L F Sbjct: 224 YTLAGSLVMLLGLVSLVVETQSLTGISTPFSMPDMARALQDQPLPVETQTILFLLIATGF 283 Query: 232 AVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFA-PIA 290 +K+P+ P H WLP H +APTAGSVDLAG+LLK YG LR ++P+ P+AS P+ Sbjct: 284 LIKVPMFPFHTWLPLVHVEAPTAGSVDLAGVLLKLGCYGFLRIAIPMLPDASLTVGQPLV 343 Query: 291 MWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGL 350 L VIG+ YG+ A+ QTDIKR++AY+S++H+G ++ ++ + G + MI HGL Sbjct: 344 AILAVIGVVYGSLCAYHQTDIKRMVAYSSIAHLGVCMLGLFALNAEGLSGGICMMINHGL 403 Query: 351 SAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMI 410 + LF L G ++ER HTR + +GGL S++ L AL +F + A++G+PG F+GE + Sbjct: 404 ATGALFSLVGMIHERYHTRSLTDLGGLASRIPVLSALLVFISFASIGLPGLNGFIGEILS 463 Query: 411 LFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQE-LPGMSLRELFMIL 469 L G FQV V VI T G+V ++ Y L M+ FG + + +++RE I Sbjct: 464 LLGMFQVSAVYAVIGTTGVVLSAWYLLRMVQVGLFGPLREPAGDHSHVSDLTVREGLAIW 523 Query: 470 LLVVLLVLLGFYPQPILD 487 L + + LG +PQ +L+ Sbjct: 524 PLALACLGLGLFPQTLLN 541 >UniRef50_Q9G8V8 NADH-ubiquinone oxidoreductase chain 4 n=8 Tax=Eukaryota RepID=Q9G8V8_RHDSA Length = 483 Score = 282 bits (722), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 156/422 (36%), Positives = 253/422 (59%), Gaps = 11/422 (2%) Query: 75 FGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAI 134 F ++ + +DG+S+ ++LT L + +L W +K +++ + I +I VF + Sbjct: 72 FNFNLFIGVDGISIFFILLTTFLIPICLLVEWFSKKKNIKEYYVCFLLINIFLIVVFSVL 131 Query: 135 DMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVF 194 D+ +F+ F+E +L+PM+ +I ++G K +I AA +FF+YT ++ML++I L+F Sbjct: 132 DILIFYIFFESILIPMFLVIGIFGSKTR----KIKAAYQFFLYTLLGSVLMLLSIF-LIF 186 Query: 195 VHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTA 254 +T +++ LL+ S + LL L FFI+FA+K+P+ PLH WLP+AH +APTA Sbjct: 187 FEAGST-----DFQILLSVKFSEKKQLLLWLAFFISFAIKIPMFPLHIWLPEAHVEAPTA 241 Query: 255 GSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRL 314 GSV LAG+LLK AYG +RFSL FP AS F P+ L ++ + Y + Q D+K++ Sbjct: 242 GSVILAGVLLKMGAYGFVRFSLTFFPIASVFFCPLIFVLSLLAVLYTSLTTLRQVDLKKI 301 Query: 315 IAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMM 374 IAY+SV+HMG V I I++ + +G+ + MI+HG ++ LF+L G LYE+ H+R ++ Sbjct: 302 IAYSSVAHMGLVTIGIFSFNLYGLEGSFLMMISHGFVSSALFLLVGMLYEKHHSRLIKYY 361 Query: 375 GGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASV 434 GG+ M LFF+VA LG PGT +F EF+IL G+FQV + S+ G+VF++ Sbjct: 362 GGIAQIMPLYTFFFLFFSVANLGFPGTSSFCAEFLILLGAFQVNTFVATFSSLGMVFSAA 421 Query: 435 YSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIG 494 Y L + +R FG+ + S + ++ ++ L + LG YP+ LD H++I Sbjct: 422 YCLWLSNRLLFGQLRVYYVSSYC-DLQKKDFAILFPLSFFTLFLGVYPEIFLDYIHASIS 480 Query: 495 NI 496 N+ Sbjct: 481 NL 482 >UniRef50_C1A8Y2 NADH-quinone oxidoreductase chain M n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8Y2_GEMAT Length = 521 Score = 282 bits (721), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 170/452 (37%), Positives = 267/452 (59%), Gaps = 18/452 (3%) Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMW 122 WQ+ D+PW+ G ++ L +DGLSL MVVLT + LA+L SW + F L+ Sbjct: 78 WQARVDIPWLADLGATLSLGVDGLSLPMVVLTAFVVPLALLGSWNNVRVRTPAFGALLLL 137 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 + G++GVF+ +D+ F+ WE+ML+P Y L+ +WG + G +R A+ ++ ++T Sbjct: 138 LTSGLVGVFITLDLLAFYLAWELMLIPTYLLVGVWG---AAGTSR--ASLRYVLFTLVGS 192 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 L+ML+AI+AL +NA G + + + LL +S + + L FF AFAVK +VP H Sbjct: 193 LLMLVAIIAL----WNAGGGTSLHIDHLLQVALSPRAQLWMFLAFFAAFAVKSALVPFHT 248 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFA--PIAMWLGVIGIFY 300 WLPDA S APT +V L LK AY +LRF++PLFP A+ ++ + L VI + Y Sbjct: 249 WLPDAQSAAPTVAAVTLG---LKVGAYAILRFAIPLFPAAAMDYTVRSTILVLSVIAVVY 305 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 GA +A AQ D KR+I+Y+SVSH+G +++ + + + QGAV+ +++ G++ LF+L G Sbjct: 306 GALVAMAQRDFKRVISYSSVSHLGLIMLGSFVLTPQSVQGAVMSIVSSGIATTALFLLAG 365 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 L +R T GGL + W + ++T+ +PGT FVGEF++L G++ PV Sbjct: 366 MLEDRRATTAFSAFGGLAKVLPWFSVALIVSMLSTVALPGTIGFVGEFLVLIGTYAEFPV 425 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 + VI+T G++FA+VY L + + F K ++ A+ LP +S RE F+++ LV +V LG Sbjct: 426 LAVIATSGVIFAAVYGLRAVQQLLFEKVDTE-ANGALPDLSGRERFVMVTLVAAMVYLGV 484 Query: 481 YPQPIL---DTSHSAIGNIQQWFVNSVTTTRP 509 P IL D + A+ ++ N+ TT P Sbjct: 485 APHAILQRADRASQALIESVRFGPNAPTTLPP 516 >UniRef50_Q37401 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Allomyces macrogynus RepID=Q37401_ALLMA Length = 482 Score = 280 bits (715), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 175/494 (35%), Positives = 271/494 (54%), Gaps = 19/494 (3%) Query: 2 LLPWLILIPFIGGFLCWQTER-FGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 +L LI++P +G + + E F + IALI G+ +S+ LW+Q + Q + Sbjct: 1 MLSTLIILPLVGALIIYLGESSFTNETRLRIALIIAGINFIISIGLWIQFDENTAQFQFV 60 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 + S F + + +DG+SL V+LT L + +L E + + L Sbjct: 61 EDFGSLFGQGLC-----HLIIGVDGISLFFVILTSFLTIPIILTPPYNGESPTAYL-ITL 114 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + + +I VF+ +D+ LF+ +E +L+PM+ +I +WG K +I AA FF+YT Sbjct: 115 LILESMLIAVFVVLDLLLFYICFETVLIPMFLIIGIWGSKVR----KIMAAYHFFLYTLL 170 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYE-ELLNTPMSS-GVEYLLMLGFFIAFAVKMPVV 238 L ML+ I+ V Y TG + Y +L T SS E LL L FF++FAVK+P+ Sbjct: 171 GSLFMLLGII----VIYYQTGTTDYQYLLAVLGTAESSLTRENLLWLTFFLSFAVKVPMF 226 Query: 239 PLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 P++GWLP AHS+APT GS+ LAGILLK + YG LR+S+PLFPNAS F P + L VIGI Sbjct: 227 PVYGWLPLAHSEAPTGGSMILAGILLKLSGYGFLRYSIPLFPNASNYFTPFVLTLAVIGI 286 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFIL 358 Y + F QTD+K +IAY+S+SHM V+ AI++ + + +GA+ MI+HG+ ++ LF Sbjct: 287 LYSIFACFRQTDLKSVIAYSSISHMNIVIAAIFSDNIIGIEGALFMMISHGIVSSALFFC 346 Query: 359 CGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVV 418 G LY+R TR + GL M + + +PG F+GEF+ G F+ Sbjct: 347 VGALYDRTGTRILAYYRGLTMVMPLFSLCFFILILNNMAVPGGIGFIGEFLCFLGIFKTN 406 Query: 419 PVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLL 478 P+I ++++ +V + Y++ + +R FG S ++ RE ++L V L +LL Sbjct: 407 PIICLLASLSIVLGAAYNIFLTNRLLFGSLSKYFKSYN--DLTRREFMILLPFVFLSILL 464 Query: 479 GFYPQPILDTSHSA 492 G P IL+ H + Sbjct: 465 GLCPNIILNAIHQS 478 >UniRef50_D1CCC3 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCC3_THET1 Length = 511 Score = 279 bits (714), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 175/470 (37%), Positives = 278/470 (59%), Gaps = 20/470 (4%) Query: 29 RWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSL 88 RWIA+I G+ L L+ + Q + +W W P + +L IDG+S+ Sbjct: 39 RWIAVIGSGVNLMLAAIALASFRFGTDQIQLVERWI------WAPSLNLQYYLGIDGISV 92 Query: 89 LMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLV 148 L+ LT LL +A++ S+ I+ +++ L+ + G++GVF+A+D+ LF+ F+E+ L+ Sbjct: 93 LLYGLTALLSFIAIVYSFGVIDYRIKEYYVALLVLETGMLGVFVALDLLLFYVFFELTLI 152 Query: 149 PMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNAT-GVWTFNY 207 PM LI +WGH ++ +A KFF+YT A L+ML AI A ++VH ++ T NY Sbjct: 153 PMALLIGVWGHG-----RKLYSAVKFFLYTLAGSLIMLAAI-ASIYVHTSSIPNGPTLNY 206 Query: 208 EELLNTPM--SSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLK 265 +LL S + + GFF AFA+K+P+ P H WLPDAH APTAGS+ LAG+LLK Sbjct: 207 VDLLRIAPNWSYAWQVWMFWGFFFAFAIKVPLFPFHTWLPDAHVDAPTAGSILLAGVLLK 266 Query: 266 TAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGF 325 YG LR+ LPL P AS + A I + L VI I YGA + Q D+K+L+AY+SV+ MGF Sbjct: 267 MGGYGFLRWLLPLAPEASRDLAVIPITLSVIAILYGALVTLVQRDLKKLVAYSSVASMGF 326 Query: 326 VLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLP 385 V++ I+ + QGA++QM++HG + LF+ G +YER+HTR++ +GGL + M Sbjct: 327 VVLGIFIFNLHGAQGAIVQMVSHGFISGALFLGVGVIYERLHTREIAKLGGLATLMGPFA 386 Query: 386 ALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRA-Y 444 +L + ++A LG+PG FVGE ++ G++ P + ++ ++ Y L M+ R Y Sbjct: 387 SLWVMLSLANLGLPGFSAFVGEVLVTLGTWLYKPWLAFPVYAYIILSAAYMLWMVARVFY 446 Query: 445 FGKAKSQIASQELPGMSL-RELFMILLLVVLLVLLGFYPQPILDTSHSAI 493 GK +S+++ LP M++ +E +++LV +LG + P L + ++ Sbjct: 447 LGKPESKVS---LPPMNIYQEALPLVVLVGFSFVLGVWATPFLRATEPSL 493 >UniRef50_Q3Z7Z2 Proton-translocating NADH-quinone oxidoreductase, M subunit n=5 Tax=Dehalococcoides RepID=Q3Z7Z2_DEHE1 Length = 497 Score = 278 bits (712), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 182/467 (38%), Positives = 271/467 (58%), Gaps = 38/467 (8%) Query: 50 GGYSLTQS-AGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKE 108 G+ + S AG+ Q++ ++PWI + HL +DGLSL +VLT LLGVLAVL SWK Sbjct: 51 AGFDRSSSMAGVIQFEE--NLPWISLLNANYHLGVDGLSLPFLVLTTLLGVLAVLISWKV 108 Query: 109 IEKYQGFFHLNLMWIL---GGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGK 165 + + FF +W+L + GVF+++D+ LFF FWE+ L+PMYFLI++WG + Sbjct: 109 DLRIKEFF----VWLLILQTSITGVFVSLDLLLFFIFWELELIPMYFLISIWGAGRKE-- 162 Query: 166 TRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLML 225 +A K+ +YT G +L IL L F ATG + + L +T +++ + +M+ Sbjct: 163 ---YSALKYVLYTLFGGAFILAGILILFF----ATG--SLDIASLASTDLNNFLRPAMMV 213 Query: 226 ----GFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPN 281 FFI FA+K+P P H WLPDAH+ APTA SV LAG LLK Y +LR ++ +FP+ Sbjct: 214 LTFFMFFIGFAIKLPAFPFHTWLPDAHTDAPTAASVILAGTLLKMGGYAMLRLNVAMFPD 273 Query: 282 ASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGA 341 ++AP+ + + VI + YGA + QTDIKRLIAY+SVSHMGFVL+ I+T +++ GA Sbjct: 274 VCRDWAPLILTIAVINVIYGAAITLKQTDIKRLIAYSSVSHMGFVLLGIFTLGEISMNGA 333 Query: 342 VIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLG---M 398 V+QM +HG+ LF + G + H RD+ +GGL +M P ++ F +A LG + Sbjct: 334 VLQMFSHGIITGLLFAITGVVMHNTHERDINKLGGLAKQM---PRTAIIFILAGLGAMAV 390 Query: 399 PGTGNFVGEFMILFGSFQ--VVP---VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIA 453 P T F+ E + GSFQ VVP V T++ GLV A+ Y L + R + G + Sbjct: 391 PATSGFIAEVSVFLGSFQSSVVPGGQVFTMLCLLGLVLAAAYILWTVQRVFLGPGLEKF- 449 Query: 454 SQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWF 500 Q + E+ L+ +V++ +G YPQ I+D + + + F Sbjct: 450 -QMVKDADKTEIVFSLVFLVVMFGVGLYPQIIVDVIQTGVAPLAAVF 495 >UniRef50_Q30PJ1 Proton-translocating NADH-quinone oxidoreductase, chain M n=8 Tax=Epsilonproteobacteria RepID=Q30PJ1_SULDN Length = 517 Score = 278 bits (711), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 175/496 (35%), Positives = 289/496 (58%), Gaps = 19/496 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L LI P + G L + + ++ +A+ T+ LA+ WL + T S Sbjct: 5 ILSILIFFPALAGILGFVVNKNSIR-SYGVAVATIEFGLAM----WLWFAFDSTLSG--M 57 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q+ + + +P FGI+ + +DG+SL +++L ++ + S E++ + + L+ Sbjct: 58 QFMEQIAL--VPAFGINYIVGVDGISLFIIILAAFFTMIGI-ASLGEMKDIKNLI-ITLL 113 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 ++ ++GVF+A+D +F+ FWE+ LVPM ++I WG G RI A+ KFF+YT A Sbjct: 114 FLQMTMVGVFVALDAIVFYLFWELSLVPMLYIIGAWG-----GPLRIYASVKFFLYTFAG 168 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 LVML+ +L + + +Y ATG W+F + + + L + FF FA+K+P+ P H Sbjct: 169 SLVMLVGMLFMAYFYYQATGEWSFALLDWYRLILPESFQNWLFIAFFFGFAIKVPMFPFH 228 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFA-PIAMWLGVIGIFY 300 WLP AH QAPT GSV LA ILLK Y +RFSLPLFP+AS F PIA+ L +I I Y Sbjct: 229 TWLPYAHGQAPTIGSVILAAILLKMGTYAFIRFSLPLFPDASVYFMYPIAV-LAIIMIIY 287 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 A +A+AQ DIK+++AY+SVSHMG +++ + + G++ MIAHG+ + LF L G Sbjct: 288 TAMVAYAQKDIKQVVAYSSVSHMGVIILGTFALNVEGITGSIFLMIAHGVVSGALFFLVG 347 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 +Y+R HT+ M GGL S M + +A++G+P T NFVGEF+ L G ++ + Sbjct: 348 VIYDRRHTKLMSEFGGLASVMPRYATIFGIMLMASVGLPLTINFVGEFLSLLGFYKQSHI 407 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 +T+++ ++ ++Y L+ + +FG + ++ LP ++ REL ++ L ++ + LG Sbjct: 408 LTLLAGTAIIVGAIYMLSAYKKMFFGVVTHE-ENRNLPDINKRELLALIPLTIITIWLGI 466 Query: 481 YPQPILDTSHSAIGNI 496 YP+PIL+ + ++ + Sbjct: 467 YPKPILEPINKSVEGV 482 >UniRef50_B3QY39 Proton-translocating NADH-quinone oxidoreductase, chain M n=14 Tax=Bacteroidetes/Chlorobi group RepID=B3QY39_CHLT3 Length = 545 Score = 278 bits (710), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 173/457 (37%), Positives = 254/457 (55%), Gaps = 41/457 (8%) Query: 74 RFG---ISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHL-NLMWILGGVIG 129 RFG I L +DGLS+ MV+LT L+ ++ V+ SW ++ +G+F L NL+ + ++G Sbjct: 83 RFGTLNIEYFLGVDGLSITMVLLTALISIIGVVSSWTIQKQVKGYFLLYNLLSM--AMMG 140 Query: 130 VFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAI 189 F+A+D FLF+ FWE+ML+PMYFLI +WG G R AA KFF+YT + ML+ + Sbjct: 141 CFVALDFFLFYVFWEIMLLPMYFLIGIWG-----GPNREYAAIKFFLYTLFGSVFMLLVL 195 Query: 190 LALVF-VHYNATGVWTFNYEELLNT----------PMSSGVEYLLMLGFFIAFAVKMPVV 238 + L F V ATG TF+ +++ P S+ Y + F+ FA+K+P+ Sbjct: 196 IGLYFSVIDPATGNHTFSMVAMVDQANYIPGSIFGPESTFWRYAAFIALFVGFAIKVPMF 255 Query: 239 PLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 P H WLPDAH +APT SV LAG+LLK YG+LR + P FP + A + G I I Sbjct: 256 PFHTWLPDAHVEAPTPISVILAGVLLKLGTYGMLRINFPFFPEVFTDLAYVIGVFGAINI 315 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFIL 358 YGA A AQ D+K+++AY+S+SHMG+VL+ + + GA+ QM HG A LF+L Sbjct: 316 IYGALCALAQLDLKKMVAYSSISHMGYVLLGMAAINTEGMSGALFQMFNHGTITAMLFLL 375 Query: 359 CGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSF--Q 416 G +Y+R H+R + GGL S M + A+LG+PG F+ E I GSF + Sbjct: 376 VGVIYDRAHSRQIEKFGGLSSYMPVYSGILTMAFFASLGLPGLSGFISEAFIFVGSFSSE 435 Query: 417 VVPVITVISTFGLVFASVYSLAMLHRAYFGKAK---------SQIASQEL--------PG 459 V I ++S G+VF + Y L L R + GK + + QE+ Sbjct: 436 VTRPIAMVSVLGIVFGAAYLLWSLQRMFLGKRRPDALYELHEDENGHQEIHFHDWTGKND 495 Query: 460 MSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNI 496 + REL M++ L ++++ LG YP P+L +I + Sbjct: 496 VDARELSMLIPLGIIVLFLGIYPMPVLGLMTESINKL 532 >UniRef50_Q5FHA2 NADH-quinone oxidoreductase chain M n=11 Tax=Rickettsiales RepID=Q5FHA2_EHRRG Length = 486 Score = 277 bits (708), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 173/495 (34%), Positives = 278/495 (56%), Gaps = 30/495 (6%) Query: 2 LLPWLILIPFIGGFLC----WQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQS 57 +L ++IL+P +G L ++T +KV I+LI+ G T L+ + ++ YS Sbjct: 1 MLLFMILLPILGSCLLTINNFKTTSVLIKV---ISLISSGATFILNFIIAIKFDYSYKGY 57 Query: 58 AGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQ-GFF 116 I F + +DGLSL +++LT L +L + S ++ Y F Sbjct: 58 QFICNLLHGFS------------IGVDGLSLPLILLTSFLFLLCTVFSLFNMKIYNLRTF 105 Query: 117 HLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFI 176 L+ + G IGVF ++D+ +F+ F+E +L+PM+F+I +WGH+ RI A K F+ Sbjct: 106 IALLLLLEGLTIGVFASLDIIMFYIFFESVLIPMFFIIGIWGHE-----DRIYATFKLFL 160 Query: 177 YTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMP 236 YT A L+ LIAI+ + + + +Y +L ++ + L FFI+FA+K+P Sbjct: 161 YTLAGSLLFLIAIIYIYLFSDKVSNIEQLSY--ILPNFLNIKAQKWLWCAFFISFAIKIP 218 Query: 237 VVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVI 296 +VP H WLP+AH QAPT GSV LAGIL+K Y LLRFS+P+ P A+ F+ + L +I Sbjct: 219 IVPFHTWLPNAHVQAPTVGSVLLAGILIKVGTYALLRFSIPMLPEANMYFSNFVIILSII 278 Query: 297 GIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLF 356 G+ Y + ++F Q++IK+ IAY+S++HMGFV I++ ++ GA+ QMI+HGL +A LF Sbjct: 279 GVIYASLISFVQSNIKKFIAYSSIAHMGFVTAGIFSFNEYGISGAIFQMISHGLISAALF 338 Query: 357 ILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ 416 G LY+R HT ++ GL M + +FF +A++ +PGT FVGEF+ + G F Sbjct: 339 FCVGMLYDRNHTLEISKYSGLAKVMPKFSIMFIFFTMASIALPGTSGFVGEFLSILGVFH 398 Query: 417 VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLV 476 + + G++ +VY L + +G + S + +L ELF++++L L++ Sbjct: 399 YSKLFAALIATGVILGAVYMLFLSKEIIWGASNSSLIVCDLNK---NELFILIILATLVL 455 Query: 477 LLGFYPQPILDTSHS 491 + G YP IL S S Sbjct: 456 VFGIYPYYILLKSLS 470 >UniRef50_A9EX60 NADH dehydrogenase (Ubiquinone) n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9EX60_SORC5 Length = 671 Score = 274 bits (700), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 187/510 (36%), Positives = 296/510 (58%), Gaps = 22/510 (4%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL LI +PF+G + +PR + + G TLA+ +L + LT + Sbjct: 108 LLNVLIGLPFVGAAAV-------LFMPRQLLSLLRGFTLAVLGAGFLASLWLLTVPMTV- 159 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 W + WIP GI H+AIDG+SL +V+LT + +A S+ I+ L+ Sbjct: 160 GWHFQSIKEWIPALGIRWHVAIDGISLWLVLLTTFIAPIAAYASFGSIKNRIKELCFCLL 219 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 ++ G ++G F+A+D+FLFF FWE+MLVPM+ +I +WG G +I AA K F+YT A Sbjct: 220 FLQGAMLGAFVALDLFLFFLFWELMLVPMFVMIGIWG-----GVEKIKAAIKLFVYTMAG 274 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 ++ML I+ LV+ + TG +TF+Y L + G + L F IAF +K+P+ P+H Sbjct: 275 SMLMLAGIVYLVWANQKLTGAYTFDYLALSRVVLPRGAQMLCFWAFSIAFFIKVPMWPVH 334 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG-IFY 300 WLPDAH QAPT GSV LA ++LK Y LRFS+ LFP ++ A + ++G + Y Sbjct: 335 TWLPDAHVQAPTGGSVILAAVMLKIGTYAYLRFSMGLFPGPASSLAANLAGIAILGGVIY 394 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 GA +A+ Q+D+KRL+AY+SV+H+G+V++ ++ + QGAVIQM+ HG+S LF+L G Sbjct: 395 GALVAWKQSDVKRLVAYSSVAHLGYVMLGLFGVTPSGIQGAVIQMVNHGVSTGALFLLVG 454 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP- 419 +Y+R HTR++ GGL M L L A++G+PGT F+GEFMI+ G++ Sbjct: 455 VIYDRRHTREVSEFGGLAKVMPVYATLFLIVTFASVGVPGTNGFIGEFMIIMGTYASERL 514 Query: 420 -----VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVL 474 + T+ + G++ A+VY L+++ + +FG + ++ LP ++ RE + L+++ Sbjct: 515 GTFSGIHTIGAAAGVILAAVYMLSVVQKMFFGPLTNP-KNKHLPDVTPREGLALAPLILM 573 Query: 475 LVLLGFYPQPILDT-SHSAIGNIQQWFVNS 503 + ++G +P LD S + Q+ V S Sbjct: 574 IFVIGLFPAIFLDRMKESVLSTYNQFKVVS 603 >UniRef50_D2RZ76 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RZ76_9EURY Length = 509 Score = 273 bits (697), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 184/518 (35%), Positives = 281/518 (54%), Gaps = 37/518 (7%) Query: 1 MLLPWLILIPFIGGFLCW-QTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAG 59 M++ LI + IG + + R K+ I+L+ +L LW+ + + +A Sbjct: 1 MMIEALIAVALIGALVTFVAPNRVAGKLAFAISLVPA------ALSLWMFTAFDGSGNAL 54 Query: 60 IP-QWQSEFDMPWIPRFGISIH--LAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFF 116 + + E + WI SI + +DG+SL +VV+T +L LA+L SW I+ + F Sbjct: 55 LDGELAFESHLEWIQFGDYSIEWFVGLDGISLPLVVMTTILCTLAILSSWTPIDSRESQF 114 Query: 117 HLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFI 176 + +++I +IGVF A+D F++F FWE +L+PMY LI +WG G R AA KFF+ Sbjct: 115 YGLVLFIEANLIGVFSALDFFVWFIFWEAVLIPMYLLIGVWG-----GPDRKYAAIKFFV 169 Query: 177 YTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSG-------------VEYLL 223 YT + LVM + +ALVF +A +F ++ + ++ G L+ Sbjct: 170 YTNVASLVMFGSFIALVFGLGDAA--TSFALPDIADAMVNGGGVQSSVFGIDPGTFTALV 227 Query: 224 MLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNAS 283 + F+ FAVK+PVVP H WLPDAH QAPT SV LAG+LLK Y LLRF+ +FP Sbjct: 228 FIAMFLGFAVKVPVVPFHTWLPDAHVQAPTPASVLLAGVLLKMGTYALLRFNFTMFPEQV 287 Query: 284 AEFA-PIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAV 342 A +A PIA + VI + YGA +A AQTD+KR++AY+SVS MG+V++ + +Q GA Sbjct: 288 ATYAVPIAA-IAVISVIYGAMLALAQTDLKRIVAYSSVSSMGYVILGLIAYTQFGVGGAT 346 Query: 343 IQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTG 402 QM++HGL + +F+ G +Y HTR + M GL +M + + A +G+P Sbjct: 347 FQMVSHGLISGLMFMSVGVIYNVTHTRSVEEMSGLADRMPIAVGILVAGAFGYMGLPLMS 406 Query: 403 NFVGEFMILFGSFQV----VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELP 458 F GEF I FG+FQ P+ T ++ FG+V + Y L L R FG + ++ Sbjct: 407 GFHGEFTIFFGAFQADFAYAPLFTALAMFGIVIVAGYLLFALQRTVFGPYHLE-TDYDVG 465 Query: 459 GMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNI 496 L ++ + +L+ L++ LG P+ I D A+ I Sbjct: 466 RAPLHDIAPMFVLLALIIALGVAPELIFDMITDAVDPI 503 >UniRef50_A3ZKZ8 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZKZ8_9PLAN Length = 609 Score = 273 bits (697), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 176/515 (34%), Positives = 269/515 (52%), Gaps = 71/515 (13%) Query: 56 QSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF 115 ++AG+ Q+ +PWIP F I L DG+S +VVLT L+ LA+ SW IEK+ Sbjct: 58 ETAGM---QNVVSLPWIPSFNIDYFLGFDGISFPLVVLTALISALAMGASWT-IEKHVKG 113 Query: 116 FHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFF 175 + + + +L G++GVF+++D FLF+ FWE+ML+PMYFLI +WG G + AA KFF Sbjct: 114 YCVLYLILLTGMMGVFVSLDFFLFYIFWEVMLLPMYFLIGVWG-----GPRKEYAAIKFF 168 Query: 176 IYTQASGLVMLIAILALVF----------------------------------------- 194 +YT ++ML+AIL + F Sbjct: 169 LYTLFGSVLMLVAILMIYFNSDLRQLSPQQLVDSNVRLAGVEHLGAVDEHLAAATKYHET 228 Query: 195 VHYNATGVWTFNYEELLNTPMSSGV-EYLLMLG----------FFIAFAVKMPVVPLHGW 243 + T V TFN L S V + L+ G FI FA+K+P VP H W Sbjct: 229 ISAAETPVHTFNLLALQQLGQHSEVFDKELLFGKSLQWWAFVLLFIGFAIKVPSVPFHTW 288 Query: 244 LPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAW 303 LPDAH +APT S+ LAG+LLK YG++R P+ P+A + A + +GVI + YGA+ Sbjct: 289 LPDAHVEAPTPISMILAGVLLKMGGYGIIRICYPICPDAGYDLAWVVCSIGVISMIYGAF 348 Query: 304 MAFAQTDIKRLIAYTSVSHMGFVLI------AIYTGSQLAY----QGAVIQMIAHGLSAA 353 A AQTD KR++AY+SVSHMG+V++ A G +A+ +GA+ QMI HG+S+A Sbjct: 349 AALAQTDFKRMVAYSSVSHMGYVVLGLGVWSATVVGDPVAWNMGVKGAMFQMIGHGISSA 408 Query: 354 GLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFG 413 G+F + G +Y+R+H R++ GGL+ KM ++++ A LG+PG F+GE ++ Sbjct: 409 GMFFMVGVIYDRVHHRNLNEFGGLFGKMPVYTSMAIIVFFAGLGLPGLCGFIGEAFVVLS 468 Query: 414 SFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVV 473 ++ + V F ++ + Y L + R Y G ++ L +++RE+ + + L V Sbjct: 469 VWKFSAGLAVAGAFVVILTAGYILWAVQRVYLGAEYKGPHAEALTEINIREMAIAVPLCV 528 Query: 474 LLVLLGFYPQPILDTSHSAIGNIQQWFVNSVTTTR 508 L +L G P + + I Q T+ Sbjct: 529 LAILFGVLPHTVFRYMDATIDQQVQDLATWTKETK 563 >UniRef50_Q3A816 NADH dehydrogenase I chain M n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A816_PELCD Length = 491 Score = 273 bits (697), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 170/435 (39%), Positives = 259/435 (59%), Gaps = 10/435 (2%) Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 +W D PWI R+G L +DGLSLLMV LT +L +A+ SW+ + G++ L L+ Sbjct: 56 RWIRFEDWPWIERYGARFSLGLDGLSLLMVWLTLILLAVAIGISWQRYRQ-AGYYAL-LL 113 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 G++GVFLA D+ LF+ WE+ML+P+ I LWG G R+ AA K ++T A Sbjct: 114 TGGTGILGVFLAQDLLLFYLCWEVMLLPLVLCIFLWG-----GAQRVQAAFKLLVFTLAG 168 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 L+ML+A L L +H TG ++F + L T + S + L +AF VK+PVVP+H Sbjct: 169 SLLMLLAFLTLYILHGRQTGDYSFALQTLTATVVPSAIAPWLFGCLAVAFLVKVPVVPVH 228 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 GWLPDA+ +APTA ++ L+G+L K +GLLR ++PL P FAP+ LG++ I YG Sbjct: 229 GWLPDAYQEAPTAVTLLLSGVLAKAGIFGLLRVAMPLLPATWQSFAPVLAILGLLSIGYG 288 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 W+AF QTD+KRL+AY SV+H+GF+++ + G+ +A QG+++Q+ HG++ A LF+L Sbjct: 289 GWLAFVQTDLKRLVAYASVAHLGFIVVGMAAGNAIALQGSLLQLFNHGVTTAALFVLVAL 348 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 + R +R + +GGLW++ L A+ L F++ATLG+PG F GE +IL G+F+ Sbjct: 349 VKRRTTSRQLPDLGGLWARTPQLGAMFLLFSLATLGLPGLNIFTGEVLILLGAFRAQAWW 408 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 + G++ A+ Y+L M+ +G + +P M E+ ++ L VL+ G Y Sbjct: 409 GAVGMAGVLLAACYTLRMVQGVLWGVPRG---PDPMPDMKRGEMALLAPLAVLVFWFGLY 465 Query: 482 PQPILDTSHSAIGNI 496 P P L + I Sbjct: 466 PLPFLKLLSGPVEQI 480 >UniRef50_Q67KP5 NADH dehydrogenase I subunit M n=1 Tax=Symbiobacterium thermophilum RepID=Q67KP5_SYMTH Length = 508 Score = 271 bits (694), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 167/444 (37%), Positives = 248/444 (55%), Gaps = 24/444 (5%) Query: 68 DMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGV 127 +PWI G+ L +DG + M++L+ LL LAVL S+ I+ + + L+ + G Sbjct: 69 HVPWIQAIGVHYTLGVDGFAFTMLLLSTLLFPLAVLASYGYIKDRVKDYLVLLLILATGT 128 Query: 128 IGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLI 187 GVF +D LF+ FWE++L+PMYFLI +WG G+ R AA KFF+YT VML+ Sbjct: 129 NGVFATLDFMLFYVFWEIVLLPMYFLIGIWG-----GERREYAAIKFFLYTLIGSTVMLV 183 Query: 188 AILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFF---IAFAVKMPVVPLHGWL 244 + L Y ATGV TFN ++ + L FF + FAVK+P+ P H WL Sbjct: 184 GAIYL----YVATGVGTFNLLQMAAASSKLPITGLTTFAFFALLVGFAVKVPMFPFHTWL 239 Query: 245 PDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWM 304 PDAH +APT S+ LAGILLK +Y ++R S P+ P + ++A + GV+GI Y A Sbjct: 240 PDAHVEAPTPISMLLAGILLKLGSYAMVRISHPMLPQLATKYADLLFVFGVVGILYAALA 299 Query: 305 AFAQTDIKRLIAYTSVSHMGFVLIAIYTGS----------QLAYQGAVIQMIAHGLSAAG 354 A AQ D K+ +AY+SV+HMGF ++A+ S Q+A QG IAHGL + Sbjct: 300 AMAQKDFKKQVAYSSVNHMGFFIMALAAASKLAPTSPELAQVALQGGYFVTIAHGLISPL 359 Query: 355 LFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGS 414 F G YER HTRD+R +GG++ + + + F A A LG+PG F+GEF+ L GS Sbjct: 360 FFFAVGMFYERTHTRDLRKLGGMFLTIPVVSFATAFVAFANLGLPGLAGFIGEFISLTGS 419 Query: 415 FQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVL 474 + + +++ G+V + + L + G+AK + Q L ++L+E + L VL Sbjct: 420 YPAFGLWVLVAGLGMVITAAWHLLTMRNVLLGEAKPE--YQGLADITLKEKIIFAPLAVL 477 Query: 475 LVLLGFYPQPILDTSHSAIGNIQQ 498 +V G YP+P++ S++ + Q Sbjct: 478 IVFFGVYPRPVMALLQSSVEVLTQ 501 >UniRef50_A7H9U2 Proton-translocating NADH-quinone oxidoreductase, chain M n=4 Tax=Anaeromyxobacter RepID=A7H9U2_ANADF Length = 554 Score = 271 bits (694), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 194/561 (34%), Positives = 292/561 (52%), Gaps = 81/561 (14%) Query: 2 LLPWLILIPFIGG--FLCWQTERFGVKVP--------RWIALITMGLTLALSLQLWLQGG 51 +L W P +G + RF +P R IAL+T GL+ ++ W Sbjct: 8 VLSWATFFPLLGAAAIVVLLAVRFVANLPKKLVDDGARLIALLTSGLSFVAAIAAWRM-- 65 Query: 52 YSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCS---WK- 107 Y T + G+ Q F WI F I ++ +DGLS+ MV+L+GL+ +A + S W Sbjct: 66 YDPTDT-GV-QLAQHFV--WIRAFNIEYYVGVDGLSISMVLLSGLISFVATIASMPWWSG 121 Query: 108 -EIEKYQGFF---------------HLNLMWILG----------GVIGVFLAIDMFLFFF 141 + + G H ++ + G G++G F+++DMFLF+ Sbjct: 122 AKAAEMAGMVDDDHGHGHDDAHHPKHFSVRMVPGYMVMLLLLQTGMMGTFVSLDMFLFYV 181 Query: 142 FWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNA-- 199 FWE+ML+PMYFLI +WG G + AA KFF+YT A ++ML+AI+ ++YN+ Sbjct: 182 FWEVMLLPMYFLIGVWG-----GPRKEYAAIKFFLYTLAGSVLMLLAIIG---IYYNSLP 233 Query: 200 --------TGVWTFNYEEL---------LNTPMSSGVEY--LLMLGFFIAFAVKMPVVPL 240 + TFN EL LN G+++ L + FI FA+K+P+ P Sbjct: 234 AMLADGTMSSGHTFNLIELGKQGAQGQFLNAAPILGMQFTKLAFVALFIGFAIKIPMFPF 293 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H WLPDAH +APT SV LAG+LLK YG+LRF+ PL P+A+A A GVI I Y Sbjct: 294 HTWLPDAHVEAPTPISVILAGVLLKMGIYGILRFNYPLLPDATAWAANAMAVFGVINIVY 353 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 A++ Q D+K+LIAY+SVSHMGF L+ + + GAV+ + HG+ + LF++ G Sbjct: 354 AAFVCLGQKDLKKLIAYSSVSHMGFSLLGMAAMTPAGISGAVLNLFTHGIISPMLFLIVG 413 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 +Y+R H R++ GGL +++ A+ A+LG+PG F+ EFM+ G+F V Sbjct: 414 VIYDRAHHREIEKFGGLAAELPEYTAIMGLAFFASLGLPGLAGFIAEFMVFTGAFPVFTT 473 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 T+IS ++ + Y L +HR + GK + P ++ RE + L + ++LGF Sbjct: 474 YTIISATAVIITAAYYLWAIHRMFLGKLNP--VYKGYPDLNWRERISLYPLAAIAIVLGF 531 Query: 481 YPQPIL----DTSHSAIGNIQ 497 YPQ IL + H I NI+ Sbjct: 532 YPQAILGVINRSLHLLIQNIR 552 >UniRef50_C1F9D1 NADH dehydrogenase I, M subunit n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F9D1_ACIC5 Length = 505 Score = 271 bits (693), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 180/482 (37%), Positives = 271/482 (56%), Gaps = 25/482 (5%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L + +P G + R G ++ +W AL+ T L+L L Y G P Sbjct: 6 ILSLMTFLPAAGAVVVALLPRKG-RLIQWWALLVSLATFLLTLHLPAHFQY------GRP 58 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 +Q E ++PWI I+ H+ +DGLS+ +VVLTG L + VL SWK IE F+ + Sbjct: 59 GFQFEVNIPWILHPAINYHIGVDGLSMWLVVLTGFLAPIGVLVSWKAIETRTKEFYFLFL 118 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 +IGVF+++D+FL++ FWE+ LVPM LIA++G AA KFF+YT Sbjct: 119 LQQTAMIGVFISLDLFLYYGFWELTLVPMAILIAMFGRSRGP-----RAAIKFFLYTFIP 173 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLM----LGFFIAFAVKMPV 237 + L+AIL L Y TG TF+YE+L + + G + L F +AFAVK+PV Sbjct: 174 SALFLVAILWL----YARTG--TFDYEKLQASIATGGFSPQALIWVSLAFLLAFAVKVPV 227 Query: 238 VPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 PLHGWL D ++APTA ++ +AG K Y +LRF+L LFP S EFAP + L VIG Sbjct: 228 FPLHGWLGDGIAEAPTAMAMVIAG---KLGLYSILRFNLGLFPEQSREFAPWMIALAVIG 284 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 + YGA +A Q D+KRL+AY+ +S + F + I+ S GAV Q+I G+S L + Sbjct: 285 LIYGALVALVQKDMKRLVAYSILSQLSFCTLGIFCFSLTGLDGAVYQIINEGVSGGALLV 344 Query: 358 LCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV 417 L G LYER T ++ GGL ++ + L + ++ +G+P FVGEFM+L GSF Sbjct: 345 LLGILYERYGTFEIAQYGGLSKRLPHMATLYVITTLSLIGLPILNGFVGEFMVLSGSFPG 404 Query: 418 VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVL 477 VI+T G++ ++ Y L M+ R ++G + + + ++ REL + +++L+V+ Sbjct: 405 HHGWVVIATLGVILSASYMLWMIQRVFYGPESALVQGRATFDVTGRELITVWPMILLMVV 464 Query: 478 LG 479 +G Sbjct: 465 MG 466 >UniRef50_A5UVF7 Proton-translocating NADH-quinone oxidoreductase, chain M n=2 Tax=Roseiflexus RepID=A5UVF7_ROSS1 Length = 507 Score = 271 bits (692), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 164/448 (36%), Positives = 260/448 (58%), Gaps = 20/448 (4%) Query: 68 DMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGV 127 + WIP +GIS +++DG+SL +VVLT L +A+ SW IE+ + FH ++ + G+ Sbjct: 66 SVAWIPSWGISYTVSVDGISLWLVVLTAFLTPVALAASWGTIERQERAFHALVLLLASGL 125 Query: 128 IGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLI 187 GVF A DM LF+ F+E LVP LI +WG G R AA KFF YT + +L+ Sbjct: 126 FGVFTAQDMLLFYVFFEFTLVPTALLIGIWG-----GVERRYAAIKFFAYTFTGSVFLLL 180 Query: 188 AILALVFVHYNATGVWTFNYEELLNT------PMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 I+ L +H ATGV+TF+ +L + ++ E L+ FFI FAVK P+ P H Sbjct: 181 GIIGLYLLHGQATGVYTFDIATILASLQLGTLQLNPAAERLMFGLFFIGFAVKTPIWPFH 240 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 W+ AH++AP++G++D+ G+L+K AYGL+R+++ LFP +A AP L VIGI Y Sbjct: 241 TWMTTAHAEAPSSGAIDIVGLLIKIGAYGLIRYTIQLFPATAAWAAPAISVLAVIGILYA 300 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 AW+A+ QTD+KRL+AY SVSH+G +++ ++ + G+V M+ L+ LF++ G Sbjct: 301 AWIAYQQTDMKRLLAYASVSHLGLIVLGMFALNPQGIAGSVAHMVNSALTTGALFLVVGM 360 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV- 420 L R +R+++ GGLW L +L+L + ++G+PG FV EF +L G+++ + Sbjct: 361 LVARRGSRELKSYGGLWKSTPVLGSLTLILVLGSIGLPGLNGFVSEFAVLQGAWRSPGLG 420 Query: 421 --ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLL 478 + + G V A+VY L M A+ G A ++A + P + REL +++++ +VL Sbjct: 421 WRYALPALLGAVLAAVYLLHMYRMAFMGDAPPELA--QAPDVRPRELALLVIMATPVVLF 478 Query: 479 GFYPQ----PILDTSHSAIGNIQQWFVN 502 G YP P+ ++ G Q+ + Sbjct: 479 GLYPNLLFGPMQQSATQIAGGTLQYLAS 506 >UniRef50_O47497 NADH-ubiquinone oxidoreductase chain 4 n=50 Tax=Metazoa RepID=NU4M_METSE Length = 491 Score = 269 bits (687), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 171/461 (37%), Positives = 261/461 (56%), Gaps = 26/461 (5%) Query: 39 TLALSLQLW----LQGGYSLTQSAGIPQW--QSEFDMPWIPRFGISIHLAIDGLSLLMVV 92 TL +L LW ++G + Q+ +W + W P F LA+DG+SL ++ Sbjct: 44 TLTATLILWAAFDMEGQF---QTINQTEWIVPPALNFKWGPLF-----LAVDGISLFFLI 95 Query: 93 LTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYF 152 LT LL + +L SW I+ F L L+++ ++GVF A+D+ LF+ +E +L+PM+ Sbjct: 96 LTALLTPICILISWNSIKFLLKEFLLCLLFLEVLLMGVFSALDLLLFYILFEGILIPMFL 155 Query: 153 LIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLN 212 LI +WG + + ++ A+ FF YT + ML+ I L Y++ G T +Y+ LLN Sbjct: 156 LIGVWGSR----EEKVRASYYFFFYTFVGSVFMLLGIFQL----YSSVG--TTDYQALLN 205 Query: 213 TPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLL 272 + + + GFF++ AVK+P VP H WLP AH +AP +GSV LAGILLK YG L Sbjct: 206 IELPISTQKWIFAGFFLSLAVKIPQVPFHIWLPQAHVEAPVSGSVILAGILLKLGGYGFL 265 Query: 273 RFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYT 332 RF+ P+ P A+ FAP + L VI I YG+ Q D+KRLIAY+SV+HMG V + ++T Sbjct: 266 RFTWPILPAATEYFAPFVIMLSVIAIIYGSLTTCRQVDLKRLIAYSSVAHMGLVTLGLFT 325 Query: 333 GSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFA 392 + AV M+AHGL ++ LFI LYER HTR ++ G+ M ++ L Sbjct: 326 HTIEGLVAAVFMMLAHGLVSSALFIAVTYLYERHHTRLIKYYRGITFSMPIFVSVFLVLT 385 Query: 393 VATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQI 452 + + +P + NFV EF L +F+ VI V++ G+V+++ YSL + +R FG + + + Sbjct: 386 LTNMAIPLSCNFVAEFFSLLAAFEYNIVIGVLAATGMVWSAAYSLYLYNRVSFGASSNYL 445 Query: 453 ASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAI 493 ++ REL I LV+L+ +LG P I+D +AI Sbjct: 446 LFTR--DLNRRELIAISPLVILIFILGVLPSLIIDPVKNAI 484 >UniRef50_C3XEB0 NADH-quinone oxidoreductase subunit M n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XEB0_9HELI Length = 536 Score = 268 bits (684), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 166/474 (35%), Positives = 267/474 (56%), Gaps = 33/474 (6%) Query: 21 ERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIH 80 +RFG R I+ I +GL +AL W+ + I Q + IP GI Sbjct: 8 KRFG----RIISFIELGLVIAL----WI------SYRVDIADTQFFTKIFLIPALGIDYI 53 Query: 81 LAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFF 140 + +DG+SL +++LT + LA + + + F + L+ + ++ +F++ ++ +F+ Sbjct: 54 VFVDGISLFLIILTAFIIFLANIYLQRRDDAKP--FVVCLLSLEAILMALFVSQNVLMFY 111 Query: 141 FFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNAT 200 WE+ L+P+ +++ +WG +I KFF+YT AS L+ML+AIL + ++ Y Sbjct: 112 TCWELALLPVLYMVGVWG-----SGQKIYIGLKFFVYTFASSLMMLLAILYIGYLCYEQL 166 Query: 201 GVWTFNY----EELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGS 256 G W+F+ L P+ + + L LGFF++ AVK+P++PLH WLP +S+AP GS Sbjct: 167 GYWSFDLGVWLSGDLKIPLDTQI--WLFLGFFVSIAVKIPIIPLHTWLPHIYSEAPALGS 224 Query: 257 VDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIA 316 V L+ +L K Y LLRF LPLFP+AS F PI L VI + Y +AF Q DIK++IA Sbjct: 225 VMLSALLSKMGTYALLRFVLPLFPDASVHFMPIVSVLAVIMVVYAGIIAFKQKDIKKVIA 284 Query: 317 YTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGG 376 Y+S+SHMG V++ I+ + GA+ M+AHG+++ GLF+L G LY R TR + GG Sbjct: 285 YSSISHMGIVVLGIFAFNNEGISGAIFMMVAHGVTSGGLFMLAGMLYYRTMTRHVDDFGG 344 Query: 377 LWSKMKWLPALSLFFAV---ATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFAS 433 + M P S FFA+ + +G+P T FVGEF+ L+G FQ P++T I+ L+ A+ Sbjct: 345 VAHVM---PHYSTFFAIVMLSNVGLPLTIGFVGEFLSLYGYFQTSPIMTAIAGTTLIIAA 401 Query: 434 VYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILD 487 Y L + ++G K +Q L + +E ++ + +++ LG +P +L Sbjct: 402 SYMLYLFKNVFYGTLKQTHITQSLKDLGFKEFCVLGPIAFVIIWLGVFPNTLLK 455 >UniRef50_Q3MAR0 NAD(P)H-quinone oxidoreductase chain 4 2 n=84 Tax=cellular organisms RepID=NU4C2_ANAVT Length = 561 Score = 266 bits (680), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 189/517 (36%), Positives = 286/517 (55%), Gaps = 53/517 (10%) Query: 4 PWL---ILIPFIG-GFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAG 59 PWL IL+P + F+ ++ G K+ RW AL G+ +A + + + S+ Sbjct: 7 PWLTAIILLPLVASAFIPLLPDKEG-KLVRWYAL---GVGIADFVLMCYTFWHHYDASSA 62 Query: 60 IPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLN 119 Q ++D W+P+ G S +++DG+S+ +V+L G + L++L +W+ K + F+ L Sbjct: 63 TFQLVEKYD--WVPQIGFSWAVSVDGISMPLVLLAGFVTTLSMLAAWQVNLKPRLFYFLM 120 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 L+ + IGVF+A D+ LFF WE+ LVP+Y L+++WG G+ R AATKF +YT Sbjct: 121 LV-LYSAQIGVFVAQDLLLFFIMWELELVPVYLLVSIWG-----GQKRRYAATKFLLYTA 174 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 A+ + +LIA LA+ +H + T TF+ EL +E LL G IAF VK+ + P Sbjct: 175 AASIFILIAGLAMA-LHGDNT---TFDIVELGAKNYPLALELLLYAGLLIAFGVKLAIFP 230 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 LH WLPDAH +A S+ LAG+LLK YGL+R +L L P+A FAP+ LGVI I Sbjct: 231 LHTWLPDAHGEASAPVSMILAGVLLKMGGYGLIRLNLELLPDAHIYFAPVLATLGVINII 290 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 YG +FAQT +KR +AY+SVSHMGFVL+ I + + + GA++QM++HGL AA LF L Sbjct: 291 YGGLNSFAQTHMKRRLAYSSVSHMGFVLLGIASFTDVGVSGAMLQMLSHGLIAAVLFFLA 350 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFG------ 413 G Y+R HT M +GG+ M + AL +A+L +PG FV E + G Sbjct: 351 GVTYDRTHTMAMDNLGGIGQAMPKVFALFTAGTMASLALPGMSGFVSELKVFIGVTTSDI 410 Query: 414 -SFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKA--------KSQIASQE-------- 456 S V+ ++ G++ +Y L+ML + ++G +QE Sbjct: 411 YSPTFCTVMVFLAAVGVILTPIYLLSMLRQVFYGTGAELSCNINNGAYENQEDEGTACFG 470 Query: 457 ----LPG------MSLRELFMILLLVVLLVLLGFYPQ 483 LPG S+RE+F+ +VL++ +G YP+ Sbjct: 471 TDCLLPGEAVYRDASIREVFIAASFLVLIIGVGVYPK 507 >UniRef50_D2QSX5 Proton-translocating NADH-quinone oxidoreductase, chain M n=3 Tax=Sphingobacteriales RepID=D2QSX5_9SPHI Length = 492 Score = 266 bits (680), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 162/443 (36%), Positives = 254/443 (57%), Gaps = 20/443 (4%) Query: 64 QSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWI 123 Q FD PWI GI + IDG+S+L+V+LTGLL VL ++ K F+ ++++ Sbjct: 54 QFAFDYPWIGSLGIRLSAGIDGISVLLVLLTGLLVPFIVLSTFNRTYKQPTTFYALMLFM 113 Query: 124 LGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGL 183 ++GVF A D FLF+ F+E L+P+YFL A+WG G+ RI KFF+YT L Sbjct: 114 QAALMGVFTARDGFLFYLFFEAALIPIYFLAAMWG-----GENRIPVTFKFFVYTIFGSL 168 Query: 184 VMLIAILALVFVHYN----ATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 MLIA LV+++Y A + + ++ E L FFIAFA+KMPV P Sbjct: 169 FMLIA---LVYLYYQTPPTAVAAHSSAIADFYKLNLTPQAENWLFWAFFIAFAIKMPVFP 225 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 H W PD + ++PT ++ LAGI+LK YGL+RF LP+ P + A+ L VIGI Sbjct: 226 FHTWQPDTYVESPTPATMLLAGIMLKMGVYGLIRFILPIVPLGVETWGKTAIILSVIGIV 285 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 YGA +A Q D+KRLIAY+S SH+G + +++ ++ QGA+IQM+AHG++ G+F + Sbjct: 286 YGAIIAIRQRDMKRLIAYSSFSHVGLMAAGVFSQTETGMQGALIQMLAHGINVVGMFFVA 345 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLG---MPGTGNFVGEFMILFGSFQ 416 ++ R TR + +GG+ P L+++F + LG +P T FVGEF++L G + Sbjct: 346 DVIFSRTSTRQLDQLGGITQST---PKLTVYFMIMLLGSVALPLTNGFVGEFLLLHGVYT 402 Query: 417 VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLV 476 + + + F ++F +VY L M ++ FG S+ ++ ++ E ++ + LVV++ Sbjct: 403 FNHYLGLAAGFTIIFGAVYMLRMFQKSMFGPTTSR--TESFTDLTTSESWVFIPLVVMVF 460 Query: 477 LLGFYPQPILDTSHSAIGNIQQW 499 +G YP L + A+ N+ ++ Sbjct: 461 WIGIYPHTFLKVTEPAVANLMKY 483 >UniRef50_C8XBD3 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XBD3_NAKMY Length = 588 Score = 265 bits (678), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 162/453 (35%), Positives = 255/453 (56%), Gaps = 16/453 (3%) Query: 6 LILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAG---IPQ 62 LI +P +G + K + IAL+ LA+ + LW+ + T +A +P Sbjct: 9 LIFLPVVGALVLAAMSGAPEKTVKLIALVFSLAELAVVVALWMSYRAATTDAASQLDVP- 67 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI----EKYQGFFHL 118 ++ F + WIP FGI+ L +DG+SL M+ L +L + + SW+E G+F L Sbjct: 68 FRETFSVTWIPYFGINFSLGVDGISLTMIALIAVLMPIVLGASWEEKLPAGRTIGGYFAL 127 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 L+ + G ++GVF A ++F+F+ +E+ML+PMYFL+ +G G R AATKFF+Y+ Sbjct: 128 -LLVLQGAMVGVFAATNVFVFYVMFEVMLIPMYFLVGAFG-----GVRRAYAATKFFLYS 181 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEEL--LNTPMSSGVEYLLMLGFFIAFAVKMP 236 GL+ML +++ L G TF++ L + + + + GF IAFA+K P Sbjct: 182 LLGGLLMLASVIGLYVASGQVLGQGTFDWVTLQSIAAQIPESTQMWIFAGFAIAFAIKAP 241 Query: 237 VVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVI 296 +VPLH WLPDA ++AP L G+L K +G LR LPL P AS++ A + + L VI Sbjct: 242 LVPLHTWLPDAGTEAPVGAGTLLVGVLDKVGTFGFLRICLPLLPAASSKLAWLIILLAVI 301 Query: 297 GIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLF 356 GI YGA +A QTD+KR + +TS++H GF+ + ++ + + GA + M+ HG++ LF Sbjct: 302 GILYGAIVAAGQTDLKRFVTFTSIAHFGFIALGVFAFTTQSIAGAALYMVNHGIATGLLF 361 Query: 357 ILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ 416 ++ G L R ++ + GG+W L L A+AT+ MPGT +F+ EF++L G+F Sbjct: 362 LIVGMLTARGGSKLVGDYGGVWKVAPILGGFFLVAALATIAMPGTNSFISEFLVLIGTFS 421 Query: 417 VVPVITVISTFGLVFASVYSLAMLHRAYFGKAK 449 P V++T G+V A+VY L + R G + Sbjct: 422 RHPAWAVLATIGIVLAAVYMLWIFQRTMTGPVR 454 >UniRef50_D2M1W1 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2M1W1_BACS4 Length = 504 Score = 265 bits (676), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 186/508 (36%), Positives = 286/508 (56%), Gaps = 27/508 (5%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLW--LQGGYSLTQSAG 59 +L WL+ +P G L + + R IA T L L +SL +W Q Sbjct: 5 ILTWLVFLPLAGALLILTVPKENKNLVRSIATGTSILALVVSLVVWGMFDRANPDMQMNH 64 Query: 60 IPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLN 119 QW FD+ ++ I+ HL +DGLS ++VLT ++ L++ S+ + + F+ Sbjct: 65 FFQW---FDLGFLQ---INYHLGVDGLSAPLLVLTTIVTTLSIFASFTIQNRVKEFYVWT 118 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 L+ +L G++GVF+A+DMFLFF F+E+ L+PM+F+IA+WG GK + AA KF +YT Sbjct: 119 LV-LLTGMLGVFVALDMFLFFLFFELTLIPMFFIIAIWG-----GKAKEYAAFKFLLYTG 172 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNY----EELLNTPMSSGVEYLLMLGFFIAFAVKM 235 +M I +A+ +V A+G TFN + N +SS V+ L L F+AFAVK+ Sbjct: 173 LGSAIMFITFIAMYYVALQASGYATFNMIVLADIFANVEVSSTVKAGLFLALFVAFAVKL 232 Query: 236 PVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGV 295 P+ P H WLP+AH +APTA S+ LAG+LLK YGL+R + +FP+ +A FA + LGV Sbjct: 233 PIFPFHTWLPNAHVEAPTAASMILAGVLLKMGGYGLIRIGIGVFPDQAARFATLIALLGV 292 Query: 296 IGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGL 355 + I YGA +A QTD+KRL+A++S+SHMG VL+ I + ++ QGA+ Q+++HG AA L Sbjct: 293 VNIIYGALLALVQTDLKRLVAFSSISHMGIVLLGIASFTESGMQGAIFQLVSHGFIAALL 352 Query: 356 FILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSF 415 F + G +YER TR + +GGL + L L A+A++G+PG FV E + G F Sbjct: 353 FFMVGAIYERTKTRTISELGGLSKSIPILAGFMLAAAMASVGLPGLSGFVSELLAFIGIF 412 Query: 416 ----QVVPV---ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMI 468 ++P VI G++ + Y L + R FG+ + +EL E + Sbjct: 413 GADASILPAAAWFGVIGGIGIILTAAYLLWAMQRTTFGQLDDK--YKELKDARPLEYIPM 470 Query: 469 LLLVVLLVLLGFYPQPILDTSHSAIGNI 496 + L+ +L+G YP + D + + +I Sbjct: 471 IGLLAFSLLIGVYPNILSDVINITVIDI 498 >UniRef50_B7K6C0 Proton-translocating NADH-quinone oxidoreductase, chain M n=6 Tax=Chroococcales RepID=B7K6C0_CYAP8 Length = 523 Score = 264 bits (674), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 171/490 (34%), Positives = 272/490 (55%), Gaps = 26/490 (5%) Query: 29 RWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSL 88 +W L T+ + + +WL + L+ S Q++ F PW G+S LAIDGLSL Sbjct: 27 QWKRLTTVLAVVVFAATIWLVTQFDLSHSG--LQFREYF--PWAKPIGLSYSLAIDGLSL 82 Query: 89 LMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLV 148 ++ L LL ++A+ + +E+ + ++ L L+ I G+ G +A ++ LF F+E+ L+ Sbjct: 83 PLLALNSLLTIIAIYSIGENVERPRLYYALTLL-INAGITGALVAQNLLLFVIFYELELI 141 Query: 149 PMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYE 208 P Y +IA+WG G+ R A+ KF +YT SGL++L L + F+ +G F+Y+ Sbjct: 142 PFYLMIAIWG-----GEKRGYASVKFLLYTALSGLLVLAGFLGIGFL----SGATNFDYD 192 Query: 209 ELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAA 268 + +S + +L+ I F +K+P+VPLH WLPDA+++A A ++ L GIL K Sbjct: 193 TISTQGLSLNTQLILLTALLIGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGILAKLGT 252 Query: 269 YGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLI 328 YGL+RF L LFP A +P +G I + YGA A AQ DIKR++AY+S+ HMG++L+ Sbjct: 253 YGLIRFGLQLFPQAWHLISPGLAIIGTISVLYGALSAIAQKDIKRMVAYSSIGHMGYILV 312 Query: 329 AIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLP--- 385 A G+QL+ GAV QMI+HGL A LF L G + ++ TRD+ ++ GL + ++ LP Sbjct: 313 AAAAGTQLSILGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPIRGLPLTS 372 Query: 386 ALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYF 445 AL + +A+ G+PG FV EF++ GSF P+ + +VY + +L+R F Sbjct: 373 ALLVMAGMASAGIPGLVGFVAEFIVFQGSFTTFPIPILFCIIASGLTAVYFVILLNRTCF 432 Query: 446 GKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYP-------QPILDTSHSAIGNIQQ 498 GK +++A P + E L +L++ LG P +P D S I +Q Sbjct: 433 GKLDNKLA--YYPPVLKSESIPAFALTILILFLGIQPNWLLRWMEPTTDVLASQINQTEQ 490 Query: 499 WFVNSVTTTR 508 V+ + + Sbjct: 491 VVVSKKSNIK 500 >UniRef50_Q85JB2 NADH-ubiquinone oxidoreductase chain 4 n=4 Tax=Monoblepharidales RepID=Q85JB2_9FUNG Length = 457 Score = 263 bits (672), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 155/410 (37%), Positives = 237/410 (57%), Gaps = 20/410 (4%) Query: 81 LAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFF 140 L IDGLSL+++VLT L +C E E L L+ I ++ VFL +D+ +F+ Sbjct: 60 LGIDGLSLVLIVLTTFL---MPICLIVEPE-----LVLPLLAIEALLMAVFLVLDVMIFY 111 Query: 141 FFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNAT 200 +E +L+P+++L+ + +A R++AA F+YT L+MLI+I L+++ + T Sbjct: 112 LCFESVLIPLFYLMGKYQGRAR----RLSAALSLFLYTLGGSLLMLISI-GLLYLEASTT 166 Query: 201 GVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLA 260 N + LL P+ + LL LGFFIAFAVK+P++P H WLP+AH ++PT GS+ LA Sbjct: 167 -----NLQALLTVPIHPDYQLLLFLGFFIAFAVKIPMIPFHLWLPEAHVESPTGGSILLA 221 Query: 261 GILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSV 320 GILLK YG LRFS+PLFP AS + P L +IGI Y A Q D+K++IAY+SV Sbjct: 222 GILLKLGGYGFLRFSIPLFPYASDYYQPFVALLALIGIVYAGLTAIRQIDMKKIIAYSSV 281 Query: 321 SHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSK 380 +HM ++ I+ + L +G++ M+AHGL + LF G LY+R HTR +R GL Sbjct: 282 AHMNLAMLGIFANNLLGIEGSIHMMVAHGLVSGALFYCVGLLYDRYHTRLVRYYRGLAIY 341 Query: 381 MKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAML 440 M LFF ++ + PG+ NF+ EF++ G + P + +I++ GL+ + YS+ + Sbjct: 342 MPLFAIFFLFFTLSNVAFPGSANFIAEFLVFTGLMDINPFLALIASTGLLLTATYSMWLY 401 Query: 441 HRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSH 490 +R FG S I+ + ++ + F + L +L G P ILD H Sbjct: 402 NRVCFGATTSYIS--KFNDLTKADTFCLSALAFTTLLFGLKPNLILDLIH 449 >UniRef50_B5IL09 NAD(P)H dehydrogenase I, subunit D-2 n=3 Tax=Cyanobacteria RepID=B5IL09_9CHRO Length = 537 Score = 262 bits (670), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 182/470 (38%), Positives = 258/470 (54%), Gaps = 27/470 (5%) Query: 28 PRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLS 87 PRW + +G TL + L L L +S G Q + W+P G+ L DGLS Sbjct: 57 PRWPRTLALG-TLLVDLGLMLVC-FSQRFDGGSSGLQLVERVSWVPALGLEWSLGADGLS 114 Query: 88 LLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIG-VFLAIDMFLFFFFWEMM 146 +VVL+GL+ +L+V SW K + +F L M + G VFL+ D LFF WE+ Sbjct: 115 APLVVLSGLVTLLSVAASWNINRKTRLYFAL--MLVQASAQGLVFLSQDFLLFFLAWELE 172 Query: 147 LVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFN 206 LVP+Y LIA+WG G+ R AATKF +YT + L++L++ LAL F + ++FN Sbjct: 173 LVPVYLLIAIWG-----GQQRQYAATKFILYTATASLLILVSGLALAF----SGDSFSFN 223 Query: 207 YEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKT 266 +L L GF I F VK+P+ PLH WLPDAH +A S+ LAG+LLK Sbjct: 224 LSDLAARSPGGVFGLLCYAGFLIGFGVKLPMFPLHTWLPDAHGEANAPVSMLLAGVLLKM 283 Query: 267 AAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFV 326 Y L+RF++ + P A AP + LG++ I YGA AFAQ ++KR IA +SVSHMGFV Sbjct: 284 GGYALMRFNVQMLPEAHLTLAPALIVLGIVNIVYGALNAFAQDNVKRRIACSSVSHMGFV 343 Query: 327 LIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPA 386 L+ I L GA++QMI+HGL AA +F + G YER T + MGGL + A Sbjct: 344 LLGIGAIDALGMSGAMLQMISHGLIAAAMFFVTGVFYERTKTLSIPNMGGLAKALPITFA 403 Query: 387 LSLFFAVATLGMPGTGNFVGEFMILFG---------SFQVVPVITVISTFGLVFASVYSL 437 L ++A+L +PG FV E + G F+V+ + V++ GLV VY L Sbjct: 404 FFLASSLASLALPGMSGFVSEITVFLGITANDGFTTGFRVITI--VLAAIGLVLTPVYLL 461 Query: 438 AMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILD 487 ++ R +FG +A + M REL + L L+V +++GF+P+ +D Sbjct: 462 SLCRRVFFGPRIPALA--VVGDMKPRELLIGLTLLVPTLVIGFWPRVAID 509 >UniRef50_A7UQZ1 AGAP012727-PA (Fragment) n=1 Tax=Anopheles gambiae str. PEST RepID=A7UQZ1_ANOGA Length = 458 Score = 261 bits (667), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 163/469 (34%), Positives = 261/469 (55%), Gaps = 23/469 (4%) Query: 29 RWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSL 88 ++IAL+ L +ALS ++ G + Q + + P S+HL +DGLS+ Sbjct: 2 KYIALVLAFLEMALSF--YMLSGLDFAATIDSQNLQYQINTPESSFLKTSLHLGVDGLSM 59 Query: 89 LMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLV 148 L ++LT +L L +L S+ + KY+ F+ ++ + G+IGVF ++D +F+ FWE+ L+ Sbjct: 60 LFILLTTILTSLIILSSFSQTVKYKNTFYGLILLMQFGLIGVFTSLDGLMFYAFWEVTLI 119 Query: 149 PMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYE 208 P++F+ LWG + D K R T TKFF+YT L ML L++V YN + +F Sbjct: 120 PIWFICGLWGQE--DQKLRFT--TKFFVYTFIGSLFML---GGLIYV-YNHSA--SFALL 169 Query: 209 ELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAA 268 ++ N+ ++ + ++ F+AFAVK+PV P H W PD ++ +PT G++ L+GI+LK A Sbjct: 170 DMYNSDLNVTQQTIVFWFIFVAFAVKLPVFPFHTWQPDTYTYSPTEGTMLLSGIMLKMAI 229 Query: 269 YGLLRFSLPLFPNASAEFA-PIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVL 327 +G+LR+ LP+ P A + I + L +IGI YGA +A + DIKR+I Y+S+SH+G ++ Sbjct: 230 FGVLRYLLPIAPGAIMGISGQIVLTLAIIGIVYGALIAIVKNDIKRIITYSSLSHIGLIV 289 Query: 328 IAIYTGSQLAY---------QGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLW 378 I+ + L +GAVIQ AHG++ GLF LY R TRD+R MGGL Sbjct: 290 AGIFASAILTLNGRFTTEGAEGAVIQAFAHGINIVGLFYCADILYRRFKTRDIRQMGGLA 349 Query: 379 SKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLA 438 L L ++ +P T F+GEF++L +IS ++ +VY L Sbjct: 350 KVAPKFAVLFLIIVFGSMAVPLTNGFIGEFILLKSISDYNTTAVIISGLTVILCAVYMLR 409 Query: 439 MLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILD 487 M +A FGK ++ + +S E ++ LVV ++L G +P IL+ Sbjct: 410 MYGKAMFGKG-DEVLLANMKDVSGVEFSVLASLVVFVILFGIFPNSILE 457 >UniRef50_B8G566 Proton-translocating NADH-quinone oxidoreductase, chain M n=6 Tax=Chloroflexus RepID=B8G566_CHLAD Length = 533 Score = 261 bits (666), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 167/464 (35%), Positives = 258/464 (55%), Gaps = 33/464 (7%) Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 P Q + W+ G S + +DG++L +V LT L A+ +W+ + L Sbjct: 71 PPLQFVDTVVWLTAIGASYFIGVDGINLWLVGLTAFLTPFAIAATWQRQTRSLRLLLALL 130 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 ++ +GVFLA DM LF+ F+E+ L+PM FLI +WGH R+TA K F+YT Sbjct: 131 LFAETAFLGVFLAQDMLLFYVFYELALIPMIFLIGMWGHHG-----RVTATLKLFLYTFG 185 Query: 181 SGLVMLIAILALVFVHYNA--------TGVWTFNYEELLNTPMSSGV-------EYLLML 225 L+ML AI+ L +H NA TG + N + + SG+ LL Sbjct: 186 GSLLMLFAIIGLHILHRNAIATINPGFTGTFALNQ---IVADLRSGLFSLDPLMAQLLFG 242 Query: 226 GFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAE 285 FF+AFA+K+ + PLH WLPDA+S APT ++ LAG++ K AYG +RF+L LFP ++ Sbjct: 243 AFFLAFAIKLALWPLHSWLPDAYSVAPTPAAIILAGLMAKFGAYGFIRFNLTLFPEVASW 302 Query: 286 FAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQM 345 AP L VIGI YGA +AF Q D++R+IAY S+SHM F+ + I T + + GA++QM Sbjct: 303 AAPAIAVLAVIGIIYGALIAFTQRDMQRMIAYASMSHMNFIALGIVTLTAIGINGALLQM 362 Query: 346 IAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFV 405 +AHG+ A L ++ + ER +R++ GGLW L+L +A G+PG FV Sbjct: 363 VAHGVIMAALLLIITVIEERRDSRELTSFGGLWRVTPVYAGLTLLTLLAMAGLPGLSGFV 422 Query: 406 GEFMILFGSFQVVPVI----TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMS 461 GEF +L G F P++ + + G++ A+VY+L + + G+ ++ A+ +LP + Sbjct: 423 GEFTMLQGVF-TSPLLGWPFALGAVIGIILAAVYALNLFRMGFMGEVRNT-ANLDLPDLQ 480 Query: 462 LRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNSVT 505 REL + L V++V LG +P +L + ++ Q V+++T Sbjct: 481 RRELMTLGALAVVIVALGLFPNVLLSGMNGSV----QGLVDALT 520 >UniRef50_C5AJH4 Proton-translocating NADH-quinone oxidoreductase, chain M n=31 Tax=Bacteria RepID=C5AJH4_BURGB Length = 517 Score = 260 bits (664), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 168/500 (33%), Positives = 272/500 (54%), Gaps = 34/500 (6%) Query: 9 IPFIGGFLCWQTERFGVKV-----------PRWIALITMGLTLALSLQLWLQGGYSLTQS 57 +PF+ W FGV V RW+AL+ G + L L + L G+ + Sbjct: 4 VPFLS-LAIWTPIVFGVAVLRIGSDRYPHRARWLALV--GAIVGLLLTVPLVAGFDAHNT 60 Query: 58 AGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFH 117 A Q+ +E+ PW+ FG + + +DGLSL +VVL+ ++ V+ SW+ + +H Sbjct: 61 A--VQF-TEYK-PWLSAFGSAWRMGVDGLSLWLVVLSAFTTLVIVIASWESVTTRVAQYH 116 Query: 118 LNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIY 177 + + + G +IGVF ++D LFF F+E L+P++ LI WGH R AA KFF Sbjct: 117 GSFLILSGLMIGVFTSLDGMLFFIFFEATLIPLFVLIGTWGHA-----NRSYAAIKFFFI 171 Query: 178 TQA-SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMP 236 + A S L++ + H VW L P + L+ LGFF AFAVK+P Sbjct: 172 SFAGSLLMLAAMLYLFGLTHTFDMAVW--QQARLGFAP-----QLLVFLGFFAAFAVKVP 224 Query: 237 VVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVI 296 + P+H WL D ++ PT +V L ++K YG LRF+LP+ P+A+ AP+ + L ++ Sbjct: 225 MWPVHTWLQDVYTDGPTGAAVSLG--MIKIGGYGFLRFALPIAPDAAHYLAPVRIGLSLV 282 Query: 297 GIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLF 356 + Y + +A AQ D+ +++AY+SV+HMG V + ++ Q++ GA++QMI++G A +F Sbjct: 283 AVVYASLLALAQKDMAKMLAYSSVAHMGLVTLGVFLFDQMSITGAIVQMISYGFVAGAMF 342 Query: 357 ILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ 416 + G LY+R TR + G+ + M L ++ F++A +G+PGT FVGEF+++ G+ + Sbjct: 343 LCVGALYDRTRTRAIAEYSGVANTMPRLALFAVLFSMANVGLPGTSGFVGEFLVIMGAVR 402 Query: 417 VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLV 476 V I I+ L+ ++ Y+L ML R FG K + L +S RE + L V+++ Sbjct: 403 VNFWIGAIAALTLILSAAYTLWMLKRVIFGAIKHDRVGK-LIDLSRRESVVFAALAVIVL 461 Query: 477 LLGFYPQPILDTSHSAIGNI 496 +G YP+P D A +I Sbjct: 462 AIGIYPKPFTDVIDPAAASI 481 >UniRef50_A4FPS9 NADH dehydrogenase I chain M n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FPS9_SACEN Length = 525 Score = 259 bits (662), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 176/498 (35%), Positives = 269/498 (54%), Gaps = 37/498 (7%) Query: 22 RFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHL 81 R +V +W AL + + L+ WL+ AG + Q +PWIP F I++ Sbjct: 22 RGNEQVAKWTALAFSLVEVVLAAVAWLE-----YDPAGA-RMQLTSSVPWIPAFDINLSF 75 Query: 82 AIDGLSLLMVVLTGLLGVLAVLCSWKEI----EKYQGFFHLNLMWILGGVIGVFLAIDMF 137 +DG++L+MV + LL L + SW E + GFF L L+ +GVF A D+F Sbjct: 76 GVDGIALVMVAVIALLLPLVLGYSWGEKLPAGRTHGGFFSL-LLLEQALTVGVFAATDVF 134 Query: 138 LFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHY 197 LF+ +E+ML+PMYFLI +G G+ R AA KFF+Y+ GL+ML + + Sbjct: 135 LFYVLFEIMLIPMYFLIGGYG-----GEQRTYAAVKFFLYSFLGGLIMLASAIGAYVYSA 189 Query: 198 NATGVWTFNYEELLN--TPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAG 255 G TF++ +L+ + V+ + LGFF AFA+K P+VP H WLPDA +QAP Sbjct: 190 QVLGQGTFDWAKLVPVLADAPTDVQVWIFLGFFTAFAIKAPLVPFHTWLPDAAAQAPIGV 249 Query: 256 SVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLI 315 +V + G+L K +G LR+SLPL P AS P+ + L V+G+ YG+ AF Q D+KR I Sbjct: 250 AVIVVGVLDKVGTFGFLRYSLPLTPEASKLLTPLVLVLAVLGVLYGSLQAFGQDDLKRFI 309 Query: 316 AYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMG 375 AY S++H GF+ + I+ + + GAV MI H ++ L + G + R + + G Sbjct: 310 AYVSIAHFGFIALGIFAFTSQSQVGAVSYMINHSIATGMLILAIGMVISRGGSTRIADYG 369 Query: 376 GLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVY 435 G+ L + L ++TL +PGT +F+ EF++L G+F PV TV++T G+V A+VY Sbjct: 370 GMARLTPLLAGVLLVAGLSTLSLPGTNSFISEFLVLIGAFPTQPVYTVLATVGMVLAAVY 429 Query: 436 SLAMLHRAYFGKAKSQ-----------IASQELP--------GMSLRELFMILLLVVLLV 476 L + + G + + ELP + LRE ++ L+VL++ Sbjct: 430 VLRIYQQVMQGPVRGDALLASAAGPGAVGDPELPEKHRRGITDLDLREKAVLAPLIVLVL 489 Query: 477 LLGFYPQPILDTSHSAIG 494 LGFYP+P+LD ++G Sbjct: 490 ALGFYPKPVLDVIGPSVG 507 >UniRef50_C6X103 NADH-ubiquinone oxidoreductase chain M n=2 Tax=Flavobacteriaceae RepID=C6X103_FLAB3 Length = 497 Score = 259 bits (661), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 150/451 (33%), Positives = 256/451 (56%), Gaps = 25/451 (5%) Query: 64 QSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWI 123 Q E + PW ++H IDG+S+LM++LT +L L +L S+ E Y+ F+ ++ + Sbjct: 60 QYEINYPWSQFIRSNLHFGIDGMSMLMLLLTNILTPLIILSSFNEKPGYRNTFYGLILLM 119 Query: 124 LGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGL 183 G+IG+F A+D LF+ FWE+ L+P++ + +WG + +I T+FF+YT L Sbjct: 120 QFGLIGIFTALDGLLFYIFWEVTLIPIWLIAGIWGQE----NKKIEFTTRFFVYTFVGSL 175 Query: 184 VMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGW 243 ML L L+FV+ N+ +F +L N +++ + ++ F AFAVK+PV P H W Sbjct: 176 FML---LGLIFVYTNSA---SFALTDLYNAQLNTTEQTVVFWFIFFAFAVKLPVFPFHSW 229 Query: 244 LPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFA-PIAMWLGVIGIFYGA 302 D ++ +PT G++ L+GI+LK A YGLLR+ LP+ P+ + I + L ++GI +GA Sbjct: 230 QADTYTYSPTQGTMLLSGIMLKMAVYGLLRYLLPITPDPVLGISGQIVLVLAIVGIVHGA 289 Query: 303 WMAFAQTDIKRLIAYTSVSHMGFVLIAIYTG---------SQLAYQGAVIQMIAHGLSAA 353 +A A D KR++AY+S+SH+G ++ I S +GA++Q AHG++ Sbjct: 290 LIAIAHNDTKRILAYSSLSHVGLMVAGIMASAIVTMKGSLSTQGGEGAMVQAFAHGINIV 349 Query: 354 GLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFG 413 GLF LY+R TRD+R MGGL L + + ++G+P T F+GEF+++ Sbjct: 350 GLFYCADILYKRFKTRDIRQMGGLAKVAPKFAVLFMIILLGSIGLPLTNGFIGEFILIKS 409 Query: 414 SFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQI--ASQELPGMSLRELFMILLL 471 F + V++ ++F++VY M +A FG+ ++ ++++L G+ E ++ L Sbjct: 410 IFDYNKLAAVVAGLTMIFSAVYLFRMYGKAMFGEGDERVLSSAEDLSGI---EFSVLATL 466 Query: 472 VVLLVLLGFYPQPILDTSHSAIGNIQQWFVN 502 ++L G +PQP++D S++ I +N Sbjct: 467 AGFVILFGVFPQPLIDMVSSSLKFIYASMLN 497 >UniRef50_B7GME2 NADH dehydrogenase subunit M n=6 Tax=Bacillaceae RepID=B7GME2_ANOFW Length = 503 Score = 258 bits (658), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 164/470 (34%), Positives = 263/470 (55%), Gaps = 21/470 (4%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSL-QLW-LQGGYSLTQSAGI 60 L LI P +G + + K +W+ ++ +L LSL W + GY +++ + Sbjct: 6 LSLLIFSPLLGILVLSLFPKEQEKAIKWLGVLATLPSLCLSLFAFWQYRNGYDISKLSEK 65 Query: 61 PQWQSEFDMPWIPR--FGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHL 118 W D P++ F ++ L +DG +L+M+VLT +L LA + S ++++G+F L Sbjct: 66 RSWIQFGDFPFLKETDFTVAYELHVDGFALVMIVLTTILATLAAIASTSIQKEWKGYFQL 125 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 L+ +G ++GVF A ++ LFF F+E+ L+PM+FLI WG+ + AA + IY Sbjct: 126 FLLLEIG-MLGVFAASNLVLFFIFFELTLIPMFFLIGKWGYFEKE-----KAAYSYLIYN 179 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNT------PMSSGVEYLLMLGFFIAFA 232 V+LI I A++F + + Y L N+ P+S + Y L L +AF Sbjct: 180 GLGSAVLLIVI-AVLFARTGTSNIAELRYI-LTNSSVQTISPISDDLRYGLFLALLVAFG 237 Query: 233 VKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMW 292 VK+P+VPLH W+ H QAP + + AG+LLK A+GL+R + LFP +F+ + Sbjct: 238 VKLPIVPLHRWMLRVHVQAPPSVVMLHAGVLLKIGAFGLVRLAFGLFPGQFQQFSTWLIV 297 Query: 293 LGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSA 352 LG++ + YGA++A QTD K ++AY+SVSHMG +LI + + ++ QGA+ Q ++HG A Sbjct: 298 LGIVNLLYGAFLALRQTDFKMVLAYSSVSHMGIILIGLGSLNEAGIQGAIFQAVSHGFIA 357 Query: 353 AGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILF 412 A LF G +YER T + +GG+ M ++ L A+A+LG+PGT FV EFM Sbjct: 358 AFLFFFVGVMYERTRTTTLARLGGMAKTMPYVSGFMLAGAMASLGLPGTSGFVSEFMAFV 417 Query: 413 GSFQVVPVITVISTFGLVFASVYSL-AMLHRAYFGKAKSQIASQELPGMS 461 G+FQ P + I T G++ +VY L A+LH + A + + ++L G+ Sbjct: 418 GAFQAAPWLAAIGTLGIIMTAVYLLRAVLHMTFGQTAVTNV--RDLRGIE 465 >UniRef50_Q466B7 F420H2 dehydrogenase subunit M n=3 Tax=Methanosarcina RepID=Q466B7_METBF Length = 495 Score = 258 bits (658), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 170/498 (34%), Positives = 271/498 (54%), Gaps = 29/498 (5%) Query: 6 LILIPFIGGFLCW--QTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQW 63 LIL+P I + + +T+ + +L T+GLTL L + S Q+ Sbjct: 8 LILVPLIFAAVTFFTKTKEQAAGLAFLGSLATLGLTLYAYL--------NFDSSTAAMQF 59 Query: 64 QSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWI 123 D WIP G+ + IDG+S+ +++L ++ +L SWKE + F+ ++ + Sbjct: 60 FESID--WIPLLGVKYSVGIDGISMPLILLNAIVIPFLILYSWKEEREDSNRFYGLILTM 117 Query: 124 LGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGL 183 VIGVF+A+D +F+ FWE+ L+P++F++ +WG G+ R A+ KFFIYT + L Sbjct: 118 QAAVIGVFVALDFVVFYIFWELTLIPLFFMVNIWG-----GEKRAHASYKFFIYTHVASL 172 Query: 184 VMLIAILALVFVHYNATGVWTFNYEELLNTP--MSSGV-EYLLMLGFFIAFAVKMPVVPL 240 VML+ I L + + TGV TF+ EL+ + SG+ + L F K+P P Sbjct: 173 VMLLGIFGLFYASWQQTGVPTFDIRELVGQFQFLGSGLLRNAIFLSIIFGFLAKLPTFPF 232 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMW--LGVIGI 298 H WLPDA+++APTAGSV ILLK YGL R SLP+ PN I + LG I Sbjct: 233 HSWLPDAYTEAPTAGSVLF--ILLKIGGYGLFRISLPMLPNTGNPELMITILGLLGAFSI 290 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFIL 358 YGA +A Q D+KR+IAY+S+SHMG+VL+ L+ GA+ Q +HGL + +F+ Sbjct: 291 LYGALLALRQKDLKRMIAYSSLSHMGYVLLGSAGFVALSVSGAMFQQFSHGLIMSIMFMS 350 Query: 359 CGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVV 418 G + TR + +GGL KM L L + +A+LG+PG F+ EF++L S+ + Sbjct: 351 AGAIQTSTGTRIINNLGGLAKKMPTLAVLMMLGFMASLGLPGLTGFIAEFLVLAFSYVNL 410 Query: 419 PVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLL 478 P +++ +V + Y L + RA FG ++ ++ ++ ++F + ++ +L+V Sbjct: 411 PGFVLLALLAIVITAGYHLWAMQRAMFGVYNEKLG--DVRDINSLQVFSMAVIALLVVYF 468 Query: 479 GFYPQPILD---TSHSAI 493 G+ P P+L+ T+ AI Sbjct: 469 GWNPNPVLNMMITNSEAI 486 >UniRef50_Q0BU96 NADH-quinone oxidoreductase chain M n=12 Tax=Acetobacteraceae RepID=Q0BU96_GRABC Length = 510 Score = 257 bits (657), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 177/484 (36%), Positives = 284/484 (58%), Gaps = 22/484 (4%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVK---VPRWIALITMGLTLALSLQLWLQGGYSLTQSA 58 +L L+ +P G FL G+ R IAL +T LSL LW++ S+T Sbjct: 9 ILSILMGLPIFGSFLLLFLRGTGISQAATARGIALGVSLITFLLSLVLWIEFDPSMTG-- 66 Query: 59 GIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHL 118 Q E W+P FG+S HL +DG SLL+++LT LL +++L +W+ I + + L Sbjct: 67 ----LQFEERANWMPGFGVSYHLGVDGFSLLLLLLTTLLTPISILAAWRVIHERVSHYML 122 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 ++ + +IGVF+A D +F+ +E LVP LI LWG G R AA KFF+ T Sbjct: 123 AVLMLQAAMIGVFVAQDFVVFYISYEATLVPGSLLIGLWG-----GPRRAFAAMKFFLLT 177 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 S L+ML+ +L +V TG + + + LL+T + L+ L F +AF K+P+ Sbjct: 178 FGSSLLMLLVLLYAWYV----TG--STDMDVLLHTRFPMTAQSLIFLAFVLAFGTKLPIW 231 Query: 239 PLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 PLH WLPDA+ +AP + L+G++ K AYGLLRF++ + P+A+ +AP+ M LGV+G+ Sbjct: 232 PLHSWLPDAYGEAPAPATALLSGVMAKAGAYGLLRFAIGMAPDAARHYAPVMMILGVVGV 291 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFIL 358 Y A +A AQTD+K+++AY+S SHMG V++ +++ + GA+ QM++HG+ AGLF Sbjct: 292 IYAAIIACAQTDMKKMVAYSSFSHMGLVVVGLFSLTTEGIDGALFQMVSHGIIIAGLFFC 351 Query: 359 CGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVV 418 + R +RD + G+ + L AL++ F++A++G+PGTG FVGE +++FG+ V Sbjct: 352 VSMVSFRAGSRDFAKVTGVVNYAPRLAALAMAFSMASIGLPGTGGFVGEVLVIFGALHVN 411 Query: 419 PVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLL 478 + +++ +V ++Y L+ R FGK ++ L M+ E+ +++ LVVL + + Sbjct: 412 VWLALLAGTSMVLGAIYMLSFYWRVMFGKLSGAVS--VLHDMTRLEMAVLVPLVVLTLWM 469 Query: 479 GFYP 482 GFYP Sbjct: 470 GFYP 473 >UniRef50_B0CBT4 Proton-translocating NAD(P)H-quinone oxidoreductase, chain M n=66 Tax=cellular organisms RepID=B0CBT4_ACAM1 Length = 529 Score = 257 bits (657), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 165/442 (37%), Positives = 264/442 (59%), Gaps = 27/442 (6%) Query: 66 EFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILG 125 EF +PWI G++ HLA+DGLSL ++ L LL +A+ + E+E+ + ++ L L+ + Sbjct: 62 EF-IPWIKAIGLNYHLAVDGLSLPLLGLNSLLTFIAIWSTDPEVERPRFYYALMLL-LNS 119 Query: 126 GVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVM 185 V G FLA D+ LFF F+E+ ++P+YFLIA+WG G R AATKF +YT SG+V+ Sbjct: 120 SVAGAFLAQDVLLFFLFYELEIIPLYFLIAIWG-----GARRSYAATKFLLYTAFSGIVL 174 Query: 186 LIAILALVFVHYNATGVWTFNYEELL-------NTP--MSSGVEYLLMLGFFIAFAVKMP 236 L L +V++ +G +F YE L +TP ++ ++ +LM+G + F +K+P Sbjct: 175 LATFLGIVWL----SGASSFAYEPLRAIIVGASDTPSGLTLKLQLILMVGILLGFGIKIP 230 Query: 237 VVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAP-IAMWLGV 295 PLH WLPDAH +A T SV LAG+LLK YGLLR+ + L P+A P +A+W V Sbjct: 231 FFPLHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRYGVGLLPDAWVYLGPWLAIWAAV 290 Query: 296 IGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGL 355 + YG A +Q D+K+++AY S++HM F+L+A ++L+ AV QM++HGL +A L Sbjct: 291 SAL-YGTSCAISQQDMKKVVAYASIAHMAFILLAAAASTELSMIAAVCQMVSHGLISALL 349 Query: 356 FILCGQLYERIHTRDMRMMGGLWSKMKWLP---ALSLFFAVATLGMPGTGNFVGEFMILF 412 F+L G +Y++ +RDM + GL + + LP ++ + +A+ G+PG F+ EF+ Sbjct: 350 FLLVGVVYKKTGSRDMFFLRGLLNPERGLPLIGSMMILGVMASAGIPGMVGFISEFLTFR 409 Query: 413 GSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLV 472 GS+ + PV T++ +VY L M++R +FG+ ++ +P ++ + +LV Sbjct: 410 GSYPIFPVQTLVCMIATGLTAVYFLLMINRVFFGRLPDEL--DRIPTVTWSDRLPAAILV 467 Query: 473 VLLVLLGFYPQPILDTSHSAIG 494 L+ LLG P I+ S + I Sbjct: 468 ALIFLLGIQPNFIVRWSETQIA 489 >UniRef50_UPI00019790B7 NADH dehydrogenase subunit M n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI00019790B7 Length = 528 Score = 256 bits (655), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 153/454 (33%), Positives = 260/454 (57%), Gaps = 25/454 (5%) Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q + +++ I + IS + IDG+SL ++ L + +L L +K + + ++ Sbjct: 57 QLSTHYEL--ISSYNISYFVGIDGISLFLLTLNAFITLLT-LYFFKYLRTP---LIIAIL 110 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 ++ V+GVF A+D+ +F+ FWE+ L+P+ ++I +WG G+ RI A+ K+F+YT + Sbjct: 111 FLESIVMGVFSALDVMMFYIFWELSLLPVLYIIGVWG-----GERRIYASIKYFLYTFGA 165 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 L+ML+ IL + ++ G W+FN + + + L + FFI AVK+P+ PLH Sbjct: 166 SLIMLVGILYFAYQYFLIMGAWSFNLIDWYQISLDIDTQKWLFVAFFIGMAVKIPIFPLH 225 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF-- 299 W P A++QAP GSV L+ +L K YGLLR LPLFP S+ I++++G++ +F Sbjct: 226 SWQPHAYTQAPLVGSVLLSAVLSKMGTYGLLRLVLPLFPFTSSN---ISLFIGLVCVFMV 282 Query: 300 -YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFIL 358 YGA++A AQT++K +AY+S+SHMG +++ I++ + GAV M+AHG+ LF+L Sbjct: 283 VYGAFIALAQTNLKTFLAYSSLSHMGIIVLGIFSLNTEGLSGAVFFMVAHGVVVGALFML 342 Query: 359 CGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAV---ATLGMPGTGNFVGEFMILFGSF 415 G L R T+D++ + GL M P S F + +L +P T FVGE + L+G F Sbjct: 343 VGVLQTRTQTQDLQDVQGLAHSM---PKYSSVFGIVMMCSLALPLTMGFVGEVLSLYGFF 399 Query: 416 QVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLL 475 QV P+I ++ ++Y L M + +FG A + + L ++LRE + + ++V++ Sbjct: 400 QVNPIIAFLAGSSFFVGAIYMLTMFRKVFFGSALPKYTT--LKDLNLREKIVFIPILVII 457 Query: 476 VLLGFYPQPILDTSHSAIGNIQQWFVNSVTTTRP 509 + LG YP+P+L ++ + Q + T P Sbjct: 458 IWLGVYPKPLLTPISTSAETLSQVIAAKIQLTNP 491 >UniRef50_Q46LV6 Proton-translocating NADH-quinone oxidoreductase, chain M n=22 Tax=cellular organisms RepID=Q46LV6_PROMT Length = 524 Score = 256 bits (654), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 183/516 (35%), Positives = 279/516 (54%), Gaps = 36/516 (6%) Query: 4 PWL---ILIPFIGG----FLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQ 56 PWL +L+P +G FL Q + +PR IAL+ + L L + L L + Sbjct: 23 PWLSLIVLLPIVGALIMPFLPTQESK-NSNLPRNIALVIL-LADFLIVVLALANLFDPNS 80 Query: 57 SAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFF 116 + Q + W+P G+ L +DG+S +VVL+GL+ L+ SWK +K + +F Sbjct: 81 ES----LQLVERLQWLPSIGLEWSLGVDGISAPLVVLSGLITFLSAAASWKVKQKTRLYF 136 Query: 117 HLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFI 176 L L+ + VFL+ D LFF WE+ LVP+Y LIA+WG GK ++ AATKF + Sbjct: 137 ALLLIQASAQAL-VFLSQDFLLFFLAWELELVPVYLLIAIWG-----GKRKLYAATKFIL 190 Query: 177 YTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMP 236 YT + L++LI+ LAL + +TFN E+ + LGF I F VK+P Sbjct: 191 YTALASLLILISGLALAL----SGDQFTFNLSEIAAKSFTGNFGIFCYLGFLIGFGVKLP 246 Query: 237 VVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVI 296 + PLH WLPDAH +A S+ LAG+LLK Y L+RF++ + P+ AP + +G++ Sbjct: 247 IFPLHTWLPDAHGEANAPVSMLLAGVLLKMGGYALIRFNVQILPDTHLILAPALIIIGIV 306 Query: 297 GIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLF 356 I YGA AFAQ ++KR IA +SVSHMGFVL+ I + L GA++QMI+HGL AA +F Sbjct: 307 NIIYGALNAFAQDNVKRRIACSSVSHMGFVLVGIGAINALGISGAMLQMISHGLIAAAMF 366 Query: 357 ILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGS-- 414 + G YER +T + MGGL + A L ++A+L +PG F+ E + G Sbjct: 367 FVTGSFYERTNTLSIPNMGGLAKALPITFAFFLASSLASLALPGMSGFISEITVFLGITS 426 Query: 415 -------FQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFM 467 F+ + ++ ++ GLV +Y L+M R +FG ++ + M REL + Sbjct: 427 QEGFTSLFRAITIL--LAAIGLVLTPIYLLSMCRRVFFGPRIPALSIVK--EMDARELSI 482 Query: 468 ILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNS 503 L L+V +++GF+P+ +D + + Q + + Sbjct: 483 GLSLLVPTLVIGFWPRIAIDLYEVSTNALAQSLITN 518 >UniRef50_C7PRG9 Proton-translocating NADH-quinone oxidoreductase, chain M n=4 Tax=Sphingobacteriales RepID=C7PRG9_CHIPD Length = 478 Score = 255 bits (652), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 158/496 (31%), Positives = 290/496 (58%), Gaps = 30/496 (6%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 ML LILIP + G + + + G P+ + L+ +LA+++ +L Q Sbjct: 1 MLTVLLILIPLVAGLVTFGLKGSG---PKALGLVASLASLAVTVA-------ALFQFRTA 50 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSW-KEIEKYQGFFHLN 119 P + WIP+ G + +DG+ L++ +LT + +L ++ + +E E+ F+ L Sbjct: 51 PD-ALQLTANWIPQLGAQFSVGLDGMGLMLCLLTAISFLLILIVIYNREYERPNSFYGLM 109 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 L+ G++GVF A D LF+ FWE+ L+P+YFL +LWG G+ RI KFF+YT Sbjct: 110 LLS-QAGLVGVFTAYDALLFYVFWELALIPVYFLCSLWG-----GEKRIPVTFKFFVYTF 163 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 A L+ML+ ++ + Y T +F+Y ++ ++ + L FF+AFA+KMP+ P Sbjct: 164 AGSLLMLVGLIYI----YLQTPEHSFSYASFVSGAITPQDQSWLFWLFFVAFAIKMPIFP 219 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 H W PD + Q+PT ++ L+GI++K +G++R+ LP+ P + ++ +A+ L +IGI Sbjct: 220 FHTWQPDTYEQSPTPVTMVLSGIMVKMGLFGVVRWLLPVLPKGAYMWSDVAIVLSIIGII 279 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 Y + +A Q+DIKRLIAY+S++H+G + AI+T ++ + QG ++QM HG++ GL+I+ Sbjct: 280 YASCIAIVQSDIKRLIAYSSIAHIGLMSAAIFTNNEQSLQGLMVQMFNHGINIIGLWIIV 339 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFF---AVATLGMPGTGNFVGEFMILFGSFQ 416 + R+ +++ MGG+ ++ P +++F ++A + +P T F+GEF++L G FQ Sbjct: 340 EIIQNRLKIKNLNEMGGI---AQYAPGIAIFLVTISLANIALPLTNGFIGEFLMLSGLFQ 396 Query: 417 VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLV 476 ++ G++ +VY+L M+ + FG++ ++ + EL +++++V +++ Sbjct: 397 YNVWFMAVAGLGIILGAVYTLNMVQKVIFGQSNQ--LTETTTDLKGNELLVLIIIVGIIL 454 Query: 477 LLGFYPQPILDTSHSA 492 +LGFYP+P+L+ S Sbjct: 455 VLGFYPKPMLELVSST 470 >UniRef50_UPI0001C3347B NADH dehydrogenase subunit M n=6 Tax=Cyanobacteria RepID=UPI0001C3347B Length = 486 Score = 255 bits (651), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 152/398 (38%), Positives = 241/398 (60%), Gaps = 15/398 (3%) Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 P+ Q WI + G++ L +DGLSL ++ L LL ++ + S K I+K Q F++ L Sbjct: 57 PEIQFYESFLWIKKIGLNYSLGVDGLSLPLLCLNNLLTLITIYSSGKNIQK-QNFYY-GL 114 Query: 121 MWILG-GVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 ++IL G+ G FL+ D+ LF F+E+ +P+YFL+ +WG G R A+ KF IYT Sbjct: 115 IFILNSGISGAFLSQDLLLFLIFYELETIPLYFLLVIWG-----GIKRDYASIKFLIYTS 169 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 SG+++LI+ L LV++ + TFNY L + +S + L++ I ++K+P+VP Sbjct: 170 ISGILVLISFLGLVWL----AEIPTFNYWSLRSHSLSLTHQLFLLIPLLIGLSIKIPIVP 225 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 H WLPD H +A T S+ LAGILLK YGLLRF + LFP+ +P+ L V+ Sbjct: 226 FHSWLPDTHVEASTPVSILLAGILLKLGTYGLLRFGIGLFPDGWVFLSPVLATLAVVSAL 285 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 YGA A AQ D+K+++AY+S++HM ++L+A + L+ AV QMI+HGL +A LF+L Sbjct: 286 YGASCAIAQKDMKKVVAYSSIAHMAYILLASSASTPLSLNAAVFQMISHGLISALLFLLV 345 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLP---ALSLFFAVATLGMPGTGNFVGEFMILFGSFQ 416 G +YE+ +RD+ + GL++ LP +L + +A+ G+PG F+ EF++ GSF Sbjct: 346 GIVYEKTGSRDVDFLSGLFNSQHGLPITGSLIILGVMASSGIPGMIGFIAEFLVFRGSFP 405 Query: 417 VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIAS 454 V P+ T++ G +VY L M++R +FG+ ++ + Sbjct: 406 VFPIQTLLCLIGSGLTAVYFLLMVNRVFFGRLTPRLVN 443 >UniRef50_Q0H8X6 NADH-ubiquinone oxidoreductase chain 4 n=10 Tax=Dikarya RepID=NU4M_USTMA Length = 484 Score = 254 bits (648), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 160/496 (32%), Positives = 273/496 (55%), Gaps = 26/496 (5%) Query: 2 LLPWLILIPFIGGFLCW----QTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQS 57 +L L++IP +G + T + ++ R +AL T + LS+ LW + S ++ Sbjct: 1 MLTLLLIIPLVGALMLAPMQGNTRQSESQMKR-LALGTSLINFVLSIVLWGEFDSSTSEY 59 Query: 58 AGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFH 117 Q+ EF+ +H+ +DG+SL V+LT + + +L +W I++ +F Sbjct: 60 ----QFTQEFNQVNFCH----LHIGVDGISLYFVLLTTFITPICILSNWDNIKEQLKYFL 111 Query: 118 LNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIY 177 + + + +I VF+ +D+ LF+ F+E +L+P++ ++ +WG A TR+ AA F+Y Sbjct: 112 MCFLVLETLLIAVFVVLDILLFYVFFESVLIPLFLIVGIWGGSA----TRVRAAFLLFLY 167 Query: 178 TQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPV 237 T L ML+A L ++YN G F L + S + LL L FI+ A+K P+ Sbjct: 168 TLFGSLFMLLAFLV---IYYN-VGSTDFQVVSLSEINLES--QKLLWLAVFISMAIKTPL 221 Query: 238 VPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 +P H WLP AH++AP AGSV LAG++LK A YG +R + P+A++ F+P+ + VI Sbjct: 222 LPFHVWLPRAHAEAPLAGSVILAGLILKLATYGYMRILIQFLPDATSYFSPLVQTIAVIT 281 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 + Y + QTD K L+AY+S+ HM V++ +++ + GA++ IAHG+ + LFI Sbjct: 282 LIYASLATLRQTDFKALVAYSSIGHMAVVVLGLFSNTIQGIDGALLLSIAHGVVSPALFI 341 Query: 358 LC-GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ 416 L G LY+R HTR +R G+ + M + F + +P + N+ GEF+ L G+FQ Sbjct: 342 LVGGVLYDRYHTRTIRYYRGMTAYMPLFSIMFFVFTIFNAAVPLSANWAGEFLCLAGAFQ 401 Query: 417 VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLV 476 PV V+ + G+V ++ YS+ + +R FG + ++ RE ++L L+ + V Sbjct: 402 RNPVFAVLGSTGIVLSAAYSIWLYNRIAFGAWSKYL--NYTTDLTRREFMLLLPLLFVAV 459 Query: 477 LLGFYPQPILDTSHSA 492 + G +P ILD+ H++ Sbjct: 460 VFGIFPNIILDSIHAS 475 >UniRef50_A1T694 Proton-translocating NADH-quinone oxidoreductase, chain M n=9 Tax=Actinomycetales RepID=A1T694_MYCVP Length = 526 Score = 254 bits (648), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 161/452 (35%), Positives = 249/452 (55%), Gaps = 28/452 (6%) Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF----FH 117 Q+Q + WIP FG L +DG++L +VVLT +L L ++ W + + H Sbjct: 61 QFQFVENYRWIPSFGTGYILGVDGIALALVVLTAVLLPLLIMAGWNDARDELSWGGRSVH 120 Query: 118 LNLMWIL---GGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKF 174 + IL G V+ +++D+ LF+ F+E ML+PMYFLI +G G R AA KF Sbjct: 121 IYFALILAVEGMVLISLVSLDILLFYVFFEAMLIPMYFLIGGFG-----GADRSRAAVKF 175 Query: 175 FIYTQASGLVMLIAILALVFVH--YNATGVWTFNYE---------ELLNTPMSSGVEYLL 223 +Y GL+ML +++ L +A TF++ E + P+ V +LL Sbjct: 176 LLYNLFGGLIMLASVVGLYVATAGSDAFDAGTFDFRAIVAAVAGGEFVVNPV---VMHLL 232 Query: 224 MLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNAS 283 GF AFAVK P+ P H WLPDA +A A +V + I+ K +G++R+ LPLFP+++ Sbjct: 233 FGGFMFAFAVKAPLWPFHRWLPDAAVEATPASAVLMMAIMDKVGTFGMIRYCLPLFPDSA 292 Query: 284 AEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVI 343 + F+ + + L VIGI YGA +A QTD+ RLIAYTS+SH GF+++ I+ + G+ + Sbjct: 293 SYFSGLIITLAVIGIVYGAVVAIGQTDVMRLIAYTSISHFGFIILGIFVMTTQGQSGSTL 352 Query: 344 QMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGN 403 M+ HG+S A LF++ G L R +R + GG+ L L +ATL +PG Sbjct: 353 YMVNHGISTAALFLIAGFLVSRRGSRLINAYGGVQKLAPVLAGTFLVAGLATLSLPGLAP 412 Query: 404 FVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQE--LPGMS 461 F+ EF++L G+F PV V++ LV +++Y L M R G A + E + + Sbjct: 413 FISEFLVLIGTFTRYPVFAVLAASALVLSAIYVLWMYQRMMTGPAPLSLVEGEHKIRDLV 472 Query: 462 LRELFMILLLVVLLVLLGFYPQPILDTSHSAI 493 RE+ ++ L+ LL++LG YP+P LD + A+ Sbjct: 473 PREIAVVAPLIALLLVLGVYPKPALDVINPAV 504 >UniRef50_C2KMP1 NADH dehydrogenase (Quinone) n=4 Tax=Actinomycetaceae RepID=C2KMP1_9ACTO Length = 544 Score = 253 bits (646), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 158/440 (35%), Positives = 250/440 (56%), Gaps = 15/440 (3%) Query: 56 QSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQ-- 113 A P +Q PWIP G+S L ++GL L+M++L L L +L SW+E + Sbjct: 67 NPAAAPAFQLGESYPWIPAIGLSWALGVNGLGLVMIILATALTPLVILSSWREDQDADAR 126 Query: 114 -GFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAAT 172 G+ L ++ + ++ +F A D+ LF+ +E MLVP+YFL+ +GH + R AA Sbjct: 127 AGYAGL-ILGLEACMVLIFTARDLLLFYLTFEAMLVPLYFLVGRFGH--GEAARRRHAAI 183 Query: 173 KFFIYTQASGLVMLIAILALVF----VHYNATGVWTFNYEELLNTPMSSG-VEYLLMLGF 227 KF +Y+ A GLVML ++A+ V + G+ F+ + L + S + Y M F Sbjct: 184 KFVLYSLAGGLVMLFGVIAVYVGAAPVTKSPAGL--FHMDNLTALDLGSNPLAYFTMWTF 241 Query: 228 FIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFA 287 +AFA+K P+VP+H WLP + A SV L G+L K +G++ F LFP ASA A Sbjct: 242 LLAFAIKAPMVPVHTWLPTTAAVARGGTSVLLVGVLDKVGTWGMIMFCWQLFPAASAAVA 301 Query: 288 PIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIA 347 P+ + L VI I +GA A A D+ RL+++TS+SH GF+++A+Y GSQ A +GA++ M+A Sbjct: 302 PLVIVLAVISILWGALAAIASKDLMRLVSFTSISHFGFMVMALYIGSQTAIEGAMLYMVA 361 Query: 348 HGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGE 407 HG+S AG+F+L G L ER T+++ G L L L +A +G+PG F+ E Sbjct: 362 HGVSIAGMFLLSGWLTERGGTQEIAAYSGFQRVTPTLAGLFLTSGLAAIGLPGLSGFLPE 421 Query: 408 FMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFM 467 ++IL G+F+V + + G+V A+VY L + G +++ + P + RE + Sbjct: 422 YLILVGTFKVSLAAALFAVLGVVLAAVYLLLPYQNLFTGPTDARV--RTAPDLGSREKLI 479 Query: 468 ILLLVVLLVLLGFYPQPILD 487 ++ +++ ++ LGF P P LD Sbjct: 480 MVPVILAMLGLGFLPGPTLD 499 >UniRef50_C5C0R5 Proton-translocating NADH-quinone oxidoreductase, chain M n=3 Tax=Actinomycetales RepID=C5C0R5_BEUC1 Length = 507 Score = 252 bits (644), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 164/446 (36%), Positives = 244/446 (54%), Gaps = 26/446 (5%) Query: 57 SAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKE-------- 108 A +PQ+ WIP G S + + GL LLMV+L L L + W + Sbjct: 57 DAAVPQFTETHS--WIPAIGASYAVGLTGLGLLMVLLATFLVPLVLAAGWNDARDDAVGA 114 Query: 109 ------IEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKAS 162 + + G L L + +I VF A D+FLF+ +E ML+P+YFLI L+G Sbjct: 115 PGSRAALRRQAGMVALVLA-LEAMMIAVFAAQDVFLFYVLFEAMLLPVYFLIGLYG---- 169 Query: 163 DGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNA-TGVWTFNYEELLNTPMSSGVEY 221 G R AA KF +Y+ A GL+ML ++A+ F G N ++ P+ ++ Sbjct: 170 -GPARRAAAVKFLLYSLAGGLIMLAGVIAVYFQGPGGPDGFLIANLSGVVADPV---LQR 225 Query: 222 LLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPN 281 L FFIAFAVK P+ P+H WLPDA +QAP S L G+L K +G++ LPLFP Sbjct: 226 WLFAAFFIAFAVKAPMWPVHTWLPDAAAQAPAGTSTLLVGVLDKVGTFGMIALCLPLFPE 285 Query: 282 ASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGA 341 ASA AP + L ++ I YG +A Q D+ R +A+TSVSH GF+++ IY GS +A GA Sbjct: 286 ASAWAAPAIIVLALVSIIYGGLVAIGQQDLMRFVAFTSVSHFGFIVLGIYVGSSVALTGA 345 Query: 342 VIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGT 401 ++ M+AHG+S AGLF++ G L +R +R + GGL + + L +A++ +PG Sbjct: 346 MLYMLAHGISTAGLFLVSGFLTDRGKSRRIDDYGGLQKVTPVIAGIFLVSGLASIALPGL 405 Query: 402 GNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMS 461 FV E+++L GSF V V++T G++ A++Y L R + G LP + Sbjct: 406 SGFVPEYLVLLGSFDASAVAGVVATAGVIIAAIYVLLTYQRIFTGPPPGDGPLASLPDLG 465 Query: 462 LRELFMILLLVVLLVLLGFYPQPILD 487 RE ++++ +V +++LGFYP P LD Sbjct: 466 GRERWVMVPIVAAMLVLGFYPAPALD 491 >UniRef50_P26288 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic n=371 Tax=Viridiplantae RepID=NU4C_ARATH Length = 500 Score = 252 bits (643), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 169/503 (33%), Positives = 265/503 (52%), Gaps = 24/503 (4%) Query: 4 PWLILI---PFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 PWL +I P G L G KV +W + L L L+ + Sbjct: 5 PWLTIIVVFPISAGSLMLFLPHRGNKVNKWYTICICILELLLTTY-----AFCYNFKMDD 59 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 P Q D WI F + IDGLS+ ++LTG + LA L ++ + + FFH + Sbjct: 60 PLIQLSEDYKWIDFFDFYWRMGIDGLSIGTILLTGFITTLATLAAF-PVTRDSRFFHFLM 118 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + + G IG F + D+ LFF WE+ L+P+Y L+++WG GK R+ +ATKF +YT Sbjct: 119 LAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLSMWG-----GKKRLYSATKFILYTAG 173 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 S + +LI +L + N T N E L N +E L +GF IAFAVK P++PL Sbjct: 174 SSIFLLIGVLGISLYGSNEP---TLNLELLANKSYPVTLEILFYIGFLIAFAVKSPIIPL 230 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H WLPD H +A + + LAGILLK AYGL+R ++ L P+A + F+P + +G I I Y Sbjct: 231 HTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSMFSPWLLVVGTIQIIY 290 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 A + Q ++K+ IAY+SVSHMGF++I I + + GA++Q+I+HG A LF L G Sbjct: 291 AASTSPGQRNLKKRIAYSSVSHMGFIIIGISSITDPGLNGAILQIISHGFIGAALFFLAG 350 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFG------S 414 Y+RI + MGG+ + + + ++A+L +PG F+ EF++ FG Sbjct: 351 TSYDRIRLVYLDEMGGMAISIPKIFTMFTILSMASLALPGMSGFIAEFIVFFGIITSQKY 410 Query: 415 FQVVPV-ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVV 473 F + + I + G++ +Y L+ML + ++G I + RELF+ + +++ Sbjct: 411 FLISKIFIIFVMAIGMILTPIYLLSMLRQMFYGYKLINIKNFSFFDSGPRELFLSISILL 470 Query: 474 LLVLLGFYPQPILDTSHSAIGNI 496 ++ +G YP +L + + +I Sbjct: 471 PIIGIGIYPDFVLSLASDKVESI 493 >UniRef50_Q6UVR8 NADH-ubiquinone oxidoreductase chain 4 n=5 Tax=Viridiplantae RepID=Q6UVR8_PSEAK Length = 548 Score = 251 bits (640), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 163/431 (37%), Positives = 243/431 (56%), Gaps = 21/431 (4%) Query: 75 FGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQ--GFFHLNLMWILGGVIG--- 129 F S IDG+SL +V+LT L + +L W Q G +L + I+ +I Sbjct: 125 FNFSFSFGIDGISLWLVLLTTFLTPICILVGWALPASLQIKGPHYLKIYCIIFLIIESLL 184 Query: 130 --VFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLI 187 VF D+ +F+ F+E +L+PM+ LI L+G + + I AA K F+YT A L ML+ Sbjct: 185 LVVFCVRDLLVFYIFFEAVLIPMFLLIGLFGSQPRN----IRAAYKMFLYTLAGSLPMLV 240 Query: 188 AILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLG-FFIAFAVKMPVVPLHGWLPD 246 IL L++ +T W+ +L+T S L++ FF +FAVK P+VP HGWLP+ Sbjct: 241 GIL-LIYFQCGSTD-WS-----ILSTSYFSPTRQLILWALFFFSFAVKAPLVPFHGWLPE 293 Query: 247 AHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAF 306 HS APTAGS+ LAGILLK YG LR+S+ LFP AS FAPI + ++G+ Y + + Sbjct: 294 THSNAPTAGSIVLAGILLKLGTYGFLRWSVTLFPLASVYFAPIVYIICLVGVVYVSLITL 353 Query: 307 AQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERI 366 Q D+K+LIAY+SVSHM L+ ++ + +G+++ M+AHG+ + GLF+ G LY+R Sbjct: 354 RQIDVKKLIAYSSVSHMALCLLGMFAFNVQGLEGSLLMMVAHGIVSPGLFLCIGILYDRY 413 Query: 367 HTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPG-TGNFVGEFMILFGSFQVVPVITVIS 425 TR ++ GGL M L L + L +P + +F E +I G F V ++ +I+ Sbjct: 414 KTRVIQYYGGLAMTMPILATSMLILIMGNLSLPILSPSFGAELLIFTGVFLVNRLVAIIA 473 Query: 426 TFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPI 485 +V + YSL + R +FG K+ SQ +S RE F + + L +LLG +P + Sbjct: 474 ISTMVLTAAYSLFLFSRVFFGNLKTVYISQ-FSDVSRREFFCLFPFLALSLLLGIFPALV 532 Query: 486 LDTSHSAIGNI 496 LDT H +I I Sbjct: 533 LDTCHVSIAYI 543 >UniRef50_Q950R4 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Spizellomyces punctatus RepID=Q950R4_SPIPN Length = 470 Score = 250 bits (639), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 152/408 (37%), Positives = 237/408 (58%), Gaps = 11/408 (2%) Query: 83 IDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFF 142 IDG+SL ++ LT +L + +L SWK + F + L+ I VF+ +D+ LF+ Sbjct: 65 IDGISLWLIFLTNMLMPIVILSSWKAVNIMVKPFIILLLLIGFWSNAVFMVLDLLLFYIS 124 Query: 143 WEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGV 202 +E +L+PM+FLI +G + +I AA +FF+YT L++ +A++ L Y TG Sbjct: 125 FEGVLIPMFFLIGFYGGR----NRKIHAAYQFFLYTLFGSLLLFLALIVL----YLETG- 175 Query: 203 WTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGI 262 T +Y+ LL P+S +Y+L L FFI+ A+K+P++P+H WLP+AH +APTA SV LA I Sbjct: 176 -TTDYQVLLTIPISQNRQYILWLAFFISLAIKIPMIPVHIWLPEAHVEAPTAASVILAAI 234 Query: 263 LLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSH 322 LLK +YG LR+ +PLFP+ S F P+ + ++ I Y + AQ D K++IAY+S+ H Sbjct: 235 LLKLGSYGFLRYVIPLFPDGSTYFTPLVCTMCILAIIYSSVACLAQVDAKKIIAYSSIGH 294 Query: 323 MGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMK 382 M IA++T V +I+HGL ++ LF+L G LY+R HTR ++ GL M Sbjct: 295 MNTATIALFTNDYHGLSAGVYFLISHGLISSALFLLIGVLYDRYHTRTIKYYRGLVMIMP 354 Query: 383 WLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHR 442 L L F++A + +PGT F+ EF+ G+ + P I V ++ +V A Y+L HR Sbjct: 355 VFTVLFLIFSLANVAVPGTSGFISEFLTFLGALNLNPFIAVSASIAIVLAPAYALWFFHR 414 Query: 443 AYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSH 490 +G + + S ++ +EL ++L L+ L G YPQ I + H Sbjct: 415 VSYGSFSTYLPSLY-QDVTAKELHLLLPLLFFTFLFGIYPQLIFEPLH 461 >UniRef50_B9XFX2 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=bacterium Ellin514 RepID=B9XFX2_9BACT Length = 518 Score = 250 bits (638), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 153/456 (33%), Positives = 247/456 (54%), Gaps = 46/456 (10%) Query: 70 PWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIG 129 PWIP F + +DGL LLMV+LT L+ +A+L SW+ EK +F + ++++ G++G Sbjct: 68 PWIPSFSAEYFVGVDGLGLLMVLLTALVTPMAMLSSWRISEKVPIYFAM-MLFLEAGLLG 126 Query: 130 VFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAI 189 F A++ F +F FWE+ LVP +FLI LWG G R AAT+FF+YT + ML++ Sbjct: 127 TFTALNCFHWFLFWELSLVPAFFLIKLWG-----GPNRSAAATQFFVYTMVGSVAMLLSF 181 Query: 190 LALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLML------------------GFFIAF 231 LA+ + TF++ +L + + +L L G F+ F Sbjct: 182 LAIYLAAH------TFDFVQLAEKGHTGELASMLNLNLGVYGLNSRQFPLFIFAGIFLGF 235 Query: 232 AVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAM 291 AVK+P++P H WLP +++APT ++ L G + K YG +R +P FP + Sbjct: 236 AVKVPLIPFHTWLPTTYAEAPTGTTMLLTGAMSKMGVYGFIRILMPFFPEQMRIIMTPLL 295 Query: 292 WLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAI-----YTGSQ--------LAY 338 WL VI I + A+ AF Q D+K++ AY+S++H+G+ L+ + +TGS A Sbjct: 296 WLAVITIVFSAYSAFVQKDLKKVFAYSSINHLGYCLLGVFAFAKFTGSDAHWNLEKAAAM 355 Query: 339 QGAVIQMIAHGLSAAGLFILCGQLYERI-HTRDMRMMGGLWSKMKWLPALSLFFAVATLG 397 G ++QM HGL+A+ LF G L +R RD+ GGL L A+LG Sbjct: 356 NGVMLQMFNHGLTASILFCFIGFLEQRSGGLRDLDQFGGLRRVAPVFCGLMGISIFASLG 415 Query: 398 MPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQEL 457 +PG F+GEF+I GSF +V T +S GL+ +++ L ++ R + G ++ A L Sbjct: 416 LPGLNGFIGEFLIFKGSFPIVTWATAMSVIGLLVTAIFLLTIIQRVFNGPLNAKWAG--L 473 Query: 458 PGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAI 493 P ++L+E ++L L++++G YPQ ++ ++ + Sbjct: 474 PDLTLKECLLVLPATALMLVMGIYPQIVIGKINTTV 509 >UniRef50_C1ZAS9 NADH dehydrogenase subunit M n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZAS9_PLALI Length = 559 Score = 249 bits (636), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 190/524 (36%), Positives = 276/524 (52%), Gaps = 58/524 (11%) Query: 25 VKVPRWIALITMGLTLALSLQL------WLQGGYSLTQSAGIPQWQSEF----DMPWIPR 74 V RW AL LA+++QL W+ S +A +++ +PWIP Sbjct: 31 VSAIRWYALAGACCELAITVQLAGIALGWIDA--SPAVNASTTSLRNDILLGMSLPWIPT 88 Query: 75 FGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAI 134 + ++ L +DG SL +++LT L+ VL+++ SW +GF L L+ + GV+GVFLA+ Sbjct: 89 WNVNYSLGVDGFSLPLILLTSLIFVLSIVASWSIKTHIRGFLFLLLL-LETGVMGVFLAL 147 Query: 135 DMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVF 194 D FLFF WE+ML+PMYFLI LWG G R AA KFF+YT A G+ +L+A+L + Sbjct: 148 DFFLFFVMWEVMLLPMYFLIGLWG-----GPRREYAAIKFFLYTLAGGVCLLMAMLMV-- 200 Query: 195 VHYNATGVWTFNYEELLNT----------PMSSGVEYLLMLG-----------FFIAFAV 233 Y+A+G +F+ EL + G+ +G IAF + Sbjct: 201 --YSASG-GSFDLLELARMAQGQAPKPGMDLDQGIALTAAMGDTSLQWRVFVLLLIAFLI 257 Query: 234 KMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWL 293 K+P VPLH WLPDAH +APT S+ LAGILLK YG LR ++P+ P AE+A + L Sbjct: 258 KLPAVPLHTWLPDAHVEAPTPVSMILAGILLKLGGYGFLRIAIPICPLGFAEWAWFMVAL 317 Query: 294 GVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAI-------YTG-------SQLAYQ 339 GV + YGA A AQ+D KRL+AY+SVSHMG+VL+ + TG S + Sbjct: 318 GVFCVLYGALAALAQSDFKRLVAYSSVSHMGYVLMGLGAFRFQELTGVVLNPDFSTMGLS 377 Query: 340 GAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMP 399 A QM+AHG+ +AG+F + G LY+R+ RD+R GG+ S A++ A LG+P Sbjct: 378 AATFQMVAHGIVSAGMFFVVGVLYDRVKHRDLRQFGGIASLQPHFSAIAAGIFFAGLGLP 437 Query: 400 GTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPG 459 G F+GE +F + V +V G++ + Y L L R Y G + + L Sbjct: 438 GLCGFIGEAFSIFSVWHVDRFFSVGGALGMILTAGYILWALQRVYLGPTYTGPNREYLTE 497 Query: 460 MSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNS 503 ++ RE + +L+ + LG YP L+ A + Q S Sbjct: 498 INFREYTVGYILLAFAIGLGVYPAMALNVIEPASRQLVQQISGS 541 >UniRef50_C6V5H6 NADH-quinone oxidoreductase chain m n=2 Tax=Neorickettsia RepID=C6V5H6_NEORI Length = 471 Score = 249 bits (636), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 148/388 (38%), Positives = 229/388 (59%), Gaps = 21/388 (5%) Query: 104 CSWKEIEKYQGFFHLNLMWILGGVIGVF-LAIDMFLFFFFWEMMLVPMYFLIALWGHKAS 162 C +K G+F L+++L V+ VF LA D+ F+ +E+ L+P++F+I LWG Sbjct: 98 CVIMAKDKSPGYF--GLLFLLEFVLAVFFLATDLLTFYITFELSLIPIFFIIGLWG---- 151 Query: 163 DGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYL 222 GK R+ AA K F+YT + LI+IL L F + + Y L+ + + L Sbjct: 152 -GKKRVYAAFKIFLYTLFGSVGFLISILYL-FAELGTLEISSLVY--LVENTIPIAAQKL 207 Query: 223 LMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNA 282 + + FF+AFAVK+P+ PLH WLPDAH QAPT GSV LAG+L+K YG+L+ LP+FP+ Sbjct: 208 IWIAFFLAFAVKIPMFPLHTWLPDAHVQAPTEGSVMLAGVLIKLGTYGMLKVLLPIFPSL 267 Query: 283 SAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAV 342 S EF+ + + L I + Y + +A AQTDIK+LIAY+S++HMG V ++ + Y+GAV Sbjct: 268 SREFSTLVLSLSAIAVIYTSLVALAQTDIKKLIAYSSIAHMGIVTAGLFAFNIEGYKGAV 327 Query: 343 IQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALS---LFFAVATLGMP 399 QM++HGL ++GLF G +Y+R TR + G+ M + P L + F++A +G+P Sbjct: 328 FQMVSHGLVSSGLFFCIGSIYDRSATRQIADHSGI---MNFAPKLGFAFVLFSLAAIGLP 384 Query: 400 GTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPG 459 GT FVGEF+ L G FQ ++ G+V + Y L + R +G + +I Sbjct: 385 GTAGFVGEFLALTGLFQSRETFAILCATGVVLGACYMLYLCKRIIWGTPEGKIFRD---- 440 Query: 460 MSLRELFMILLLVVLLVLLGFYPQPILD 487 + L E ++ L++L++ LG +P +L+ Sbjct: 441 IHLHESIPLITLIILVMFLGLHPSLLLN 468 >UniRef50_UPI0001C3127E proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3127E Length = 512 Score = 248 bits (634), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 155/438 (35%), Positives = 242/438 (55%), Gaps = 13/438 (2%) Query: 68 DMPWIPRFGISIHLAIDGLSLLMVVLTGLLG-VLAVLCSWKEIEKYQGFFHLNLMWILGG 126 D WI GI+ L +DGL++L+++L L + A+ S +E E+ G F Sbjct: 59 DEAWISELGITYKLGVDGLNVLLLLLATFLFAIAAIFASLREWER-PGLFFFWFGVAETA 117 Query: 127 VIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVML 186 V+G F+A D+ LF F+++ML+P YFL +WG + D +TR+ K IYT L+ML Sbjct: 118 VLGAFVAQDLILFVAFFDLMLIPFYFLTGIWG--SGDHETRVRGTQKLVIYTLVGSLLML 175 Query: 187 IAILAL-VFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLP 245 +A +A V TF+ L P+S G + + L F AF VKMP PLHGWLP Sbjct: 176 VAAIATGVLASQQHDTELTFSISALQQLPLSDGSQDWIFLCFAAAFLVKMPAFPLHGWLP 235 Query: 246 DAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMA 305 D + P +G+L K AAYG LR LP+FP+AS F + + + + I YG+ MA Sbjct: 236 DGYKAMPLPALAVFSGVLSKVAAYGFLRIVLPVFPDASVHFQELLLLIALASILYGSVMA 295 Query: 306 FAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYER 365 F+ +++ ++AY+SV+ MGF+ + I+ ++ QGA++QM+ HGL A LF + L R Sbjct: 296 FSAQNVRLVVAYSSVAQMGFITLGIFALNEDGAQGALLQMVNHGLVTAPLFFIVALLAAR 355 Query: 366 I-HTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVI 424 + +M+ MGG+ + L L L ++ATL MPG+ NFVGEF+IL G F+ P Sbjct: 356 AGGSEEMKDMGGIAFRAPVLATLFLIVSLATLAMPGSANFVGEFLILLGVFEAKPAFAFF 415 Query: 425 STFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQP 484 ++ G+ A+VY L +A + S+E ++ R+L +++ V++++ L YPQ Sbjct: 416 ASIGVALAAVYMLRAFIKAMHNRVNPSTDSRE---VTFRDLAVLVPSVIVIIALALYPQF 472 Query: 485 ILDTS----HSAIGNIQQ 498 L S ++ +Q+ Sbjct: 473 GLKRSERGTQESVAQVQE 490 >UniRef50_Q11VC4 NADH dehydrogenase I chain M n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VC4_CYTH3 Length = 487 Score = 246 bits (629), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 154/446 (34%), Positives = 258/446 (57%), Gaps = 19/446 (4%) Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWK-EIEKYQGFFHLNLM 121 W E +PWI I+ + +DG+SL +V+LT L L +L S ++ +GF+ L L+ Sbjct: 53 WNYEIVLPWISTLNINYAVGMDGISLALVLLTTFLLPLILLASLSGSLKNKKGFYVLALI 112 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + +IGVF + D+FLF+ FWE+ L+P+YF+ LWG + R KFFIYT Sbjct: 113 -MQSALIGVFTSKDLFLFYIFWELALIPIYFICLLWGDE-----NRKFVTFKFFIYTLFG 166 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 L+ML AI+ L Y+ V +F E + NT +++ + + F+AF +KMPV PLH Sbjct: 167 SLIMLAAIIYL----YSVAPVKSFAMENIYNTSLTTCEQVWIFAALFLAFGIKMPVFPLH 222 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 W P ++ AP AG++ L+GI+LK YG++R+ LP+ P A ++ +AM L +IGI Y Sbjct: 223 TWQPSTYTSAPVAGTMLLSGIMLKMGIYGVIRWILPVLPTALMDWGWLAMLLAIIGIIYA 282 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 + +A Q++ K LIAY S++H+G + ++T S QG + QM+AHG++ G+ + Sbjct: 283 SIIAIKQSNYKTLIAYVSIAHVGLIAAGLFTNSVEGLQGVIAQMLAHGVNVVGILFVVEI 342 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAV---ATLGMPGTGNFVGEFMILFGSFQVV 418 L R T ++ +GGL ++M P ++FF V A++ +P T FVGEF++ G F + Sbjct: 343 LLNRTGTLEIAKLGGLRNQM---PQFAVFFVVIMMASIALPSTNGFVGEFLLFVGIFNIN 399 Query: 419 PVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLL 478 P + ++ ++ +VY L+ + G+A+S+ + ++L E +++ +V+++ +L Sbjct: 400 PYLAAVAGITIILGAVYMLSSYQKIMLGEARSE--YDGVVDLTLLEKSILIPIVIVIFVL 457 Query: 479 GFYPQPILDTSHSAIGNIQQWFVNSV 504 G +P ILD + A+ I NS+ Sbjct: 458 GLFPNLILDLTEPAVNGILHSVHNSI 483 >UniRef50_B2TCE8 Proton-translocating NADH-quinone oxidoreductase, chain M n=21 Tax=Proteobacteria RepID=B2TCE8_BURPP Length = 518 Score = 246 bits (629), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 158/499 (31%), Positives = 267/499 (53%), Gaps = 27/499 (5%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKV-PRWIALI--TMGLTLALSLQLWLQGGYSLTQSA 58 LL LI IP + G + + + RW+ALI G + L + + Q Sbjct: 5 LLSLLIWIPIVAGVVVLRAGSDAARSRTRWLALIGAIAGFLPVIPLVTNFRNDVTSMQFV 64 Query: 59 GIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHL 118 +W FD+ W H+ +DG+SL +V LT L ++ V+ SW+ I + + Sbjct: 65 ENARWSPSFDIAW--------HVGVDGISLWLVALTALTTIIIVVASWESITERTAQYFG 116 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 + + G + GVF ++D LFF +E L+P+Y LI WG R AA KFF + Sbjct: 117 AFLMLSGFMQGVFTSLDGMLFFISFEATLIPLYLLIGTWGQS-----NRSYAAVKFFFVS 171 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 L ++L L+ + Y + +F+ T + + + L+ LGF AF VK+P+ Sbjct: 172 ------FLGSLLMLMSMLYLYSQTHSFDLALWRETHLGTWPQVLIFLGFLAAFGVKVPMW 225 Query: 239 PLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 PLH WLPD H PT +V + +LK YGLLRF+LP+ P AS FAP+ + L ++ + Sbjct: 226 PLHTWLPDVHLDGPTGAAVMIG--MLKLGGYGLLRFALPIAPQASHFFAPMMITLSLVAV 283 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFIL 358 Y + +A QTD++RL+AY++V+HMG V + ++ +++ GA++QM+++G+ + + + Sbjct: 284 IYASLLALVQTDMRRLLAYSTVAHMGLVTLGLFVFNRIGQAGAIVQMLSYGVVSGAMLLC 343 Query: 359 CGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVV 418 G LY+R T + GG+ + M A + F++A +G+PGT FVGEFM+L G+ + Sbjct: 344 TGMLYDRTKTASIAEYGGVANTMPRFAAFVMLFSMANIGLPGTSGFVGEFMVLMGAIRFN 403 Query: 419 PVITVISTFGLVFASVYSLAMLHRAYFGK-AKSQIASQELPGMSLRELFMILLLVVLLVL 477 I ++ L+ ++ Y+L M R FG A +++A+ L + RE ++ + +L++ Sbjct: 404 FWIGAMAATTLILSAAYTLWMYKRVIFGAIANARVAN--LKDLGKREFVLLGAMALLVLA 461 Query: 478 LGFYPQPILDTSHSAIGNI 496 +G P+P D ++G + Sbjct: 462 IGINPKPFTDAIDPSVGTL 480 >UniRef50_A5FKK8 NADH dehydrogenase subunit M n=2 Tax=Flavobacterium RepID=A5FKK8_FLAJ1 Length = 483 Score = 246 bits (628), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 154/488 (31%), Positives = 265/488 (54%), Gaps = 26/488 (5%) Query: 1 MLLPWLILIPFIGGFLCW-QTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAG 59 M + +++I +G F+ + ++ KV + +L +G ++ L SL + Sbjct: 1 MNVSLILIILLVGAFVTYFAGDKIASKVALFFSLAALGCSVVLLNHFNAGENISLINA-- 58 Query: 60 IPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLN 119 WI + IS L DGL+L M++LT L + + S+ K F+ Sbjct: 59 -----------WITQPKISFALNADGLALAMLLLTTALTPIIIFSSFGNEYKNAKAFYAL 107 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 ++++ + G FLA D L++ FWE+ L+P+YF+ +WG+ D + R A KFFIYT Sbjct: 108 ILFMAFAMTGTFLAADGLLYYIFWELALIPIYFIALIWGN--GDAEERRKAVVKFFIYTL 165 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 A L ML A + L Y G +F E+L +S+ ++ + L FF+A+A+K+P++P Sbjct: 166 AGSLFMLTAFIYL----YQKAG--SFLIEDLYKVQLSACEQFWIFLAFFLAYAIKIPIIP 219 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 H W + + +APT G++ L+GI+LK Y ++R+ LP+ +A+ EF I + LG+ G+ Sbjct: 220 FHTWQANVYQKAPTVGTMLLSGIMLKMGLYSVIRWQLPIAADAAIEFKNIFIALGIAGVI 279 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 YG+ +A Q D+K+L+AY+S++H+G + YT + ++GAV+QMIAHG GLF Sbjct: 280 YGSIVALRQKDLKKLLAYSSLAHVGLIAAGAYTLTLDGFRGAVLQMIAHGFVVVGLFYAA 339 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP 419 +Y R TR++ +GG+ ++ ++ L +A++ +P T NFVGEF +L+ Q+ Sbjct: 340 EIIYRRFETRNISELGGIRTQSPKFTSMFLILVLASVALPTTFNFVGEFTVLYSLSQINI 399 Query: 420 VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLG 479 V+ ++ + Y L M G+ S+I +S+ E + ++ +L+ G Sbjct: 400 WFAVLGGTTIILGAYYMLKMFQNVMLGETNSKI----FADVSINEGISMAAIIAVLIFFG 455 Query: 480 FYPQPILD 487 FYP+PI D Sbjct: 456 FYPKPITD 463 >UniRef50_Q2GKR0 NADH dehydrogenase I, M subunit n=5 Tax=Anaplasma RepID=Q2GKR0_ANAPZ Length = 491 Score = 245 bits (626), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 167/498 (33%), Positives = 268/498 (53%), Gaps = 42/498 (8%) Query: 2 LLPWLILIPFIGGFLC--WQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAG 59 ++P++ILIP +GG L + ++ +I++ ++++ L G G Sbjct: 1 MIPFMILIPVLGGCLIAFLRDSSSKLRGGLFISITFATFIASIAVLLSFYGN-------G 53 Query: 60 IPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLC------SWKEIEKYQ 113 +P + D WI A+D LSLLMV+L+ L L LC + E Sbjct: 54 LPVLR---DYTWIGEV-----FAVDRLSLLMVILSTFLFFLCALCGVFSRACGVDKESES 105 Query: 114 GFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATK 173 FF L L+ + V+GVF +F+ F+E L+PM+F+I WGH RI+AA + Sbjct: 106 SFFALLLL-LEATVLGVFSVHTSLMFYVFFEASLIPMFFIIGKWGHG-----DRISAAFR 159 Query: 174 FFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEEL---LNTPMSSGVEYLLMLGFFIA 230 F IYT A+ L+ LI LV+ + G++ Y ++ L P+ G+ L + F A Sbjct: 160 FLIYTGAASLLFLIG---LVYSRVFSLGMFESFYADVSVALALPI--GIRIALWIACFFA 214 Query: 231 FAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIA 290 FAVK+P+VP H WLP AH QAPT GSV LAG+L+K YG +RF L P S + + Sbjct: 215 FAVKLPMVPCHTWLPKAHVQAPTLGSVLLAGLLIKMGGYGFIRFCLSALPEISWKLSEFV 274 Query: 291 MWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGL 350 ++L I + Y + +AFAQ ++K L+AY+SV+HM FV I++ ++ GA+ QM++HGL Sbjct: 275 VYLSAISLVYSSLVAFAQKNMKTLVAYSSVAHMSFVAAGIFSLNESGIVGAIFQMLSHGL 334 Query: 351 SAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMI 410 +A LF+ G +Y R T DM GG+ + M L + +FF++A+ G+PGT F+GEF+ Sbjct: 335 ISAALFLCVGMIYSRTGTMDMSKCGGIAASMPKLSFMMIFFSMASAGLPGTSGFIGEFLS 394 Query: 411 LFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAK--SQIASQELPGMSLRELFMI 468 + G FQ V G+V ++ Y+L + +G + +++ ++ + E ++ Sbjct: 395 ILGIFQAFRFTAVCFAVGVVLSAAYTLRLCREVIWGSSPEGAKVIDSDINAV---EFVIL 451 Query: 469 LLLVVLLVLLGFYPQPIL 486 +L L++ G YP ++ Sbjct: 452 GILAALVLFFGIYPASVI 469 >UniRef50_Q9MD18 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Scenedesmus obliquus RepID=Q9MD18_SCEOB Length = 521 Score = 244 bits (624), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 165/474 (34%), Positives = 259/474 (54%), Gaps = 16/474 (3%) Query: 26 KVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP-QWQSEFDMPWIPRFGISIHLAID 84 K+ R+ AL+ +TL L +LW +A P Q + W I + +D Sbjct: 48 KLHRFYALLFTLVTLILCTRLW----RGFVPAAVEPFQQVVGLNRSWNGLLSIKLEFGLD 103 Query: 85 GLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWE 144 LSL MV+LT L LAVLCSW + F+ L+ + + F ++D+ F+ +E Sbjct: 104 SLSLWMVLLTAALMPLAVLCSWNTQNAHSQSFYRLLLALESFLFRCFTSLDLLCFYVLYE 163 Query: 145 MMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWT 204 L+PM+ LI L G +A ++ AA +YT LV +A+L + + Y+ G T Sbjct: 164 CSLLPMFLLIGLGGSRAR----KVRAAYLLVLYT----LVGSLAMLPCLLLLYSRAG--T 213 Query: 205 FNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILL 264 NY L + + S + LL GFF+AFAVK+P++PLH WLP+AH + TAGSV LAG+LL Sbjct: 214 TNYLLLRSLNIESSRQLLLWWGFFLAFAVKVPLMPLHLWLPEAHVERSTAGSVLLAGVLL 273 Query: 265 KTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMG 324 K YGLLRF+L +FP SA P + +IG+ Y + Q D+K+++AY+SV+HM Sbjct: 274 KLGTYGLLRFNLYMFPERSAYLGPRVSTICLIGVIYRSLTTLRQVDLKKIVAYSSVAHMS 333 Query: 325 FVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWL 384 V++A++T +++ G++ M+AHG+ + LF+ G LY+R HT+ ++ +GG + M Sbjct: 334 MVVLALFTMNEVGILGSIFTMLAHGVRSPALFLCVGALYDRTHTKRLKYLGGAATAMPLF 393 Query: 385 PALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAY 444 F++ + +P T NFVGEF+ L G F V I G++ ++VY+L R Sbjct: 394 SIWFFIFSLCNMALPLTPNFVGEFLSLCGIFAQNWVSLTICLGGVILSAVYTLWAYARVV 453 Query: 445 FGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQ 498 G K Q S + ++ RE + + +L ++ + G P +LD+ S + QQ Sbjct: 454 HGMPKIQYLSG-MADLNRREWWSLAILAIIALWWGLKPGAVLDSLGSTVYYWQQ 506 >UniRef50_A9YMC4 NADH-ubiquinone oxidoreductase chain 4 n=17 Tax=Eumetazoa RepID=A9YMC4_HYDOL Length = 485 Score = 244 bits (623), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 144/372 (38%), Positives = 221/372 (59%), Gaps = 10/372 (2%) Query: 82 AIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFF 141 +IDGLS+ + L+ LL + ++ S K I+ + F++ L + +IG+F +D+ F+ Sbjct: 80 SIDGLSIFFIGLSILLIPICIVISLKSIKYFIKEFNILLFLSVILLIGIFSILDILWFYI 139 Query: 142 FWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATG 201 +E +L+P++ +I +WG++ + +I AA FF YT L+MLI+I + Y+ TG Sbjct: 140 LFEGVLIPIFIMIGIWGYR----EEKIKAAFYFFFYTLIGSLLMLISIFKI----YSITG 191 Query: 202 VWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAG 261 T NYE LL + ++ L +GFFI AVK+P++P H WLP AH +AP AGS+ LAG Sbjct: 192 --TTNYENLLIIKIPYNIQLWLFIGFFIGLAVKVPMIPFHIWLPQAHVEAPIAGSILLAG 249 Query: 262 ILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVS 321 ILLK YGL+RF P+FP AS + P+ + + +I I YGA Q DIKRLIAY+SVS Sbjct: 250 ILLKLGGYGLIRFCYPIFPLASQFYNPLIIIISIIAIVYGALTTCRQIDIKRLIAYSSVS 309 Query: 322 HMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKM 381 HMG V I I++ S G+++ MIAHGLS++GLFI+ +Y R H+R ++ GL M Sbjct: 310 HMGLVTIGIFSHSIEGITGSILMMIAHGLSSSGLFIISAIIYFRFHSRIIKYFRGLTITM 369 Query: 382 KWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLH 441 L ++ +A + P T NF+ E ++ +F+ I ++ G+ +YSL + + Sbjct: 370 PILSVITFILILANISFPLTLNFIAELFLIISAFKFPLFIILLILMGVFINLIYSLWIYN 429 Query: 442 RAYFGKAKSQIA 453 R FG S + Sbjct: 430 RIXFGSNSSHLK 441 >UniRef50_Q3JBP7 Proton-translocating NADH-quinone oxidoreductase, chain M n=3 Tax=Gammaproteobacteria RepID=Q3JBP7_NITOC Length = 512 Score = 244 bits (622), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 150/440 (34%), Positives = 244/440 (55%), Gaps = 15/440 (3%) Query: 71 WIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGV 130 WIP I L +DGLS+L V LT L+ V +L S + I+ + L+++ G IGV Sbjct: 52 WIPTLNIDYLLGVDGLSVLFVPLTALITVAVILASRRSIKTLSSLYFALLLFLEGITIGV 111 Query: 131 FLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAIL 190 + +D+ LFF FWE+ L P++FLI+LWG G R AA K+ ++ G+++L + Sbjct: 112 YCTLDLALFFLFWELTLPPLFFLISLWG----IGVHRRYAALKYVLFMLTGGILLLFGFI 167 Query: 191 ALVFVHYNATGV-----WTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLP 245 L H N TG+ +FNY ELL TP+ + ++ L F FA+K P+ P H WLP Sbjct: 168 LLGLNHANETGIAAPAGLSFNYMELLQTPIPLATQSIVFLLLFFGFAIKAPLFPFHVWLP 227 Query: 246 DAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMA 305 + P + + + G LK +G++RF++PL P A++++ + M LG IG YGA +A Sbjct: 228 TMAMEGPASITAIIVG--LKLGLFGIIRFAIPLAPQAASQYFVLMMLLGAIGAIYGALIA 285 Query: 306 FAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYER 365 QT+++R++AY+S+SH GFVLI + QGAV Q+ G+ A+G+F++ G L R Sbjct: 286 LKQTNLRRMLAYSSISHAGFVLIGAAAFNIQGIQGAVFQLFNFGIVASGIFLIAGFLQYR 345 Query: 366 IHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVIS 425 + + ++ +GG M L +L +A++G+PGT F E +I+ G+F+ + + Sbjct: 346 LGSTELTALGGAARPMPILASLFFILGLASIGVPGTNGFAAEHLIVIGAFKAHIGMGLAV 405 Query: 426 TFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPI 485 G++ ++ Y L +A+ G ++ +E + RE ++ +V L +LLG +PQ I Sbjct: 406 LLGIILSAAYYLVFYQKAFLGPV-TRATVKETVDLRSREYWIAGTMVSLALLLGLFPQQI 464 Query: 486 LDTSHSAIGNIQQWFVNSVT 505 L T+ +Q W T Sbjct: 465 LTTTDK---TLQAWVARVET 481 >UniRef50_A6Q8K1 NADH-quinone oxidoreductase, chain M n=3 Tax=Epsilonproteobacteria RepID=A6Q8K1_SULNB Length = 479 Score = 243 bits (621), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 151/423 (35%), Positives = 244/423 (57%), Gaps = 20/423 (4%) Query: 72 IPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVF 131 + F + L +D LS++M++LT L +L L SW ++ + +F L L+ G + GVF Sbjct: 64 VRDFDFILSLQVDRLSVVMLILTSALLILVTLSSWT-MKDPRNYFSL-LVLFSGPIFGVF 121 Query: 132 LAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILA 191 ++ ++ FF FWE+ LVPM+FL+ +WG + RI AA KFF+YT + +++L+A Sbjct: 122 MSTNLLWFFIFWELTLVPMFFLVGIWGAEG-----RIYAAVKFFLYTHVASMLILLAF-- 174 Query: 192 LVFVHYNATGVW--TFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHS 249 F+ Y TG++ T E +L+TP+ V +LL FI FAVKMP+ P H WLPDAH Sbjct: 175 --FLIYKETGIFDMTMVKEAMLSTPVL--VWWLL----FIGFAVKMPIFPFHTWLPDAHV 226 Query: 250 QAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQT 309 QAP S LAG+LLK AY ++R + + P S FA + + LG++ +FY +MA +T Sbjct: 227 QAPAPVSALLAGVLLKMGAYAMIRMVVLMLPEQSEHFAWVILVLGLVTLFYAGFMALYET 286 Query: 310 DIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTR 369 +K+++AY+S+SHMG V +AI T S A+ +MI H L + LF++ G L+ R + Sbjct: 287 HLKKMVAYSSISHMGLVTVAIATLSYAGLSAALYEMIGHALIISPLFLIAGFLHSRTGSW 346 Query: 370 DMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGL 429 M+ MGGL K +L A+ + +A LG+PGT F+GE IL + + + ++ G Sbjct: 347 QMKDMGGLMQKAPYLSAIFVLAGLAALGLPGTMGFIGELTILIAAIEQYGIGLIVVALGS 406 Query: 430 VFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTS 489 + + Y + R +G+ KS + + M+ E +++ + ++ G +P + DT Sbjct: 407 MIGAGYIIWTFRRVVYGE-KSALVEKSDFRMNRVEFAALIIFALGIIGFGLFPSVLFDTI 465 Query: 490 HSA 492 ++A Sbjct: 466 NAA 468 >UniRef50_B8FRJ8 Proton-translocating NADH-quinone oxidoreductase, chain M n=13 Tax=Clostridia RepID=B8FRJ8_DESHD Length = 519 Score = 243 bits (621), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 146/434 (33%), Positives = 246/434 (56%), Gaps = 9/434 (2%) Query: 64 QSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWI 123 Q +P IP G+++ +DG+S+ M++LT L+ AV SW + + FF L L+ + Sbjct: 70 QFNLTIPLIPDIGVNLAFGVDGISIPMLLLTNLIAFTAVYSSWNIENRVKEFFVL-LLIL 128 Query: 124 LGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGL 183 + GV+G F+A D+F+FF F+E++++P+Y ++ +WG ++ T+ A K IY Sbjct: 129 IAGVMGTFIARDLFIFFLFYEIVVIPIYIMVIIWG--STKRVTKEYAGMKLTIYLLLGSA 186 Query: 184 VMLIAILALVFVHYNATGVW----TFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 ++L+A+++L N TF ++EL + + + F + + P Sbjct: 187 LLLVAMVSLWVNATNQLAAMGQGPTFMFDELARLQYDETFQIICFGLLAVGFGSLISMFP 246 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 H W PD ++ APTA S+ AG+L K YGL+R L +FP + +AP+ L V+ + Sbjct: 247 FHSWSPDGYAGAPTAVSMIHAGVLKKIGGYGLIRLGLMVFPLGAKFWAPVIAVLAVVNVL 306 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 Y A++A AQ D+K ++ Y+SVSHMG+VLIA+ + + GAV M AHG+ +A F + Sbjct: 307 YAAFIALAQKDLKYVVGYSSVSHMGYVLIAVAALNITSINGAVAMMFAHGVMSALFFSMI 366 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP 419 G +YE+ HTR++ +GGL +M L L +A LG+PGT NF+GEF I G+ +V+P Sbjct: 367 GFIYEKTHTRNIAELGGLAHQMPRLAVGFLLAGMAGLGLPGTVNFIGEFTIFIGTVKVLP 426 Query: 420 VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLG 479 V V+ G++F +VYSL ++ FG + + L + EL +++LV ++++ G Sbjct: 427 VHAVVGIAGIIFTAVYSLRLIANVLFGPRRKE--WDHLKDLRGPELVPLVVLVFVIIITG 484 Query: 480 FYPQPILDTSHSAI 493 +P +L + + Sbjct: 485 VFPNTVLQLIDTGV 498 >UniRef50_Q3T4B9 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Smittium culisetae RepID=Q3T4B9_SMICU Length = 484 Score = 242 bits (617), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 143/422 (33%), Positives = 243/422 (57%), Gaps = 24/422 (5%) Query: 78 SIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMF 137 +I L ID +SL+ ++LT L+ +A+L + +K + F L L+ L ++ +F ++D+ Sbjct: 63 NIRLGIDSISLIFIILTVLIMPIAILAGFNIKKKIKTFMILVLLTELIFML-IFTSLDIL 121 Query: 138 LFFFFWEMMLVPMYFLIALWGH--------KASDGKTRITAATKFFIYTQASGLVMLIAI 189 LF+ +E L+PM+FLI L+G K + KTRI A+ KFF+ T A L+ML++I Sbjct: 122 LFYITFESSLIPMFFLIGLYGSDSQGMFKGKINKEKTRIYASYKFFLMTFAGSLLMLLSI 181 Query: 190 LALVFVHYNATG---VWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPD 246 + ++ +Y T + TFN + + ++ +L LGFFI+FA+K P++P+H WLP Sbjct: 182 IK-IYTYYGTTDYLLISTFN--------IDNNLQIILWLGFFISFAIKTPLLPVHQWLPL 232 Query: 247 AHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAF 306 AH++AP GS+ LA ++LK A YG +++SL LFP AS F P+ M L +I + Y ++ Sbjct: 233 AHTEAPLTGSIILAALMLKLATYGFIKYSLILFPYASTYFLPLIMTLCIISLIYSSFSTL 292 Query: 307 AQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERI 366 Q D+K++IAY+S+ HM +++A+++ + GA+ AHGL++ LFI G LY Sbjct: 293 RQIDMKKIIAYSSIGHMAIIIMALFSNNYQGITGALFLSFAHGLTSPALFICVGILYNIF 352 Query: 367 HTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV-VPVITVIS 425 HTR + GL M L +L+ F +A + P T NF+GEF+ F P +I Sbjct: 353 HTRIILYFKGLSIYMPLLSSLTFIFILANMSTPLTSNFIGEFISFISIFNYHFPFTAIIF 412 Query: 426 TFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPI 485 T ++ VYS+ + +FG + S + +++ + +++ L+ ++ G +P + Sbjct: 413 TISIILVPVYSIYFYIKNFFGSYSIYLKSYQ--DINILDFNLLITLLGFILFTGIFPNSL 470 Query: 486 LD 487 L+ Sbjct: 471 LN 472 >UniRef50_C0ZYI8 NADH-quinone oxidoreductase chain M n=22 Tax=Actinomycetales RepID=C0ZYI8_RHOE4 Length = 534 Score = 240 bits (613), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 168/475 (35%), Positives = 261/475 (54%), Gaps = 24/475 (5%) Query: 38 LTLALSLQ-LWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGL 96 L LA+S+ L + GG + G Q+Q WIP FG S L +DG++L++V+LT + Sbjct: 47 LALAVSVAVLVIAGGLGVAFDRGGGQFQFVESHSWIPAFGTSYTLGLDGIALVLVLLTAV 106 Query: 97 LGVLAVLCSWKEIE------KYQGFFHLNLMWILGGVIGV-FLAIDMFLFFFFWEMMLVP 149 L L ++ W ++ K + L+ ++ ++ + F A+D+ LF+ F+E ML+P Sbjct: 107 LVPLLLIAGWNDVPADPASPKRMPHTYFALILVVESMVMISFSALDILLFYIFFEAMLIP 166 Query: 150 MYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWT---FN 206 MYFLI +G G R AA KF +Y GLVML A++ L V +T F+ Sbjct: 167 MYFLIGGFG-----GVGRSRAAVKFLLYNLLGGLVMLAAVIGLYVVTTRDESPFTSGTFD 221 Query: 207 YEELLNTPMSS------GVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLA 260 + + + S GV L LGF AFAVK P+ PLH WLPD+ ++ + +V + Sbjct: 222 FRAIASAASSGELGVGPGVLNALFLGFMFAFAVKAPLWPLHSWLPDSAVESTPSTAVLMM 281 Query: 261 GILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSV 320 ++ K + ++R+ L LFP +S+ FAP + L VIGI YGA +A AQTD+ RLIAYTS+ Sbjct: 282 AVVDKVGTFAMIRYCLQLFPESSSTFAPWIITLAVIGIVYGAILAIAQTDVMRLIAYTSI 341 Query: 321 SHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSK 380 SH GF+++ I+ + + G+ + M+ HG+S A LF++ G L + TR + GG+ Sbjct: 342 SHFGFIILGIFAMTSQSQAGSALYMVNHGISTAALFLIAGFLVSQRGTRSIAAYGGVQKV 401 Query: 381 MKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAML 440 L L +ATL +PG FV EF++L G++ V + +T LV +++Y L + Sbjct: 402 APVLAGTFLVAGLATLSLPGLAPFVSEFLVLIGTYSRYHVAAIAATVALVLSAIYILWLY 461 Query: 441 HRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGN 495 R G K + ++ REL ++ L+ LL+LLG YP+P LD A+ + Sbjct: 462 QRMMGGPVKE--GQGTIRDLARRELVVVAPLIALLLLLGIYPKPALDVITPAVSH 514 >UniRef50_C7P4L7 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Halomicrobium mukohataei DSM 12286 RepID=C7P4L7_HALMD Length = 522 Score = 240 bits (612), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 157/421 (37%), Positives = 232/421 (55%), Gaps = 33/421 (7%) Query: 69 MPWIPRFGISIHLAI--DGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGG 126 + WI G +I ++ DG+S+ ++ LTG+L LA++ SW I++ Q F+ ++ + Sbjct: 71 IDWIELGGYTIQYSVGLDGVSMPLLALTGILTTLALVSSWTPIDERQSQFYGLMLLMEVS 130 Query: 127 VIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVML 186 +IGVF A+D F +F FWE +L+PMY LI +WG G R AA KFF+YT + LVM Sbjct: 131 LIGVFSALDFFFWFVFWEGVLIPMYLLIGVWG-----GPRRKYAAIKFFVYTNVASLVMF 185 Query: 187 IAILALVFVHYNATGVWTFNYEE----LLNTPMSS----GVEYLLMLGF---FIAFAVKM 235 + ALVF ++ + T E L+ M S V L +L F F+ FAVK+ Sbjct: 186 VGFFALVFSLGDS--IATLGLPEITQALVAGEMGSLAGIAVADLKLLAFVLMFVGFAVKV 243 Query: 236 PVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASA----EFAPIAM 291 PV PLH WLPDAH +APT SV LAG+LLK Y LLRF+ + + + P+A+ Sbjct: 244 PVFPLHTWLPDAHVEAPTPVSVMLAGVLLKMGTYALLRFNFTMLSDVATGSVLAIMPVAI 303 Query: 292 W-LGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGL 350 +GV + YGA +A AQ D+KR++AY+S+S MG+V++ + + GA QMI+HGL Sbjct: 304 AVIGVFSVIYGALLALAQRDLKRIVAYSSISSMGYVILGLVAFTPHGMGGATFQMISHGL 363 Query: 351 SAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMI 410 + +F+ G +Y HTR + M GL +M W + + A +G+P F E I Sbjct: 364 ISGLMFMAVGVIYNETHTRMVGDMSGLADRMPWTVGIFVSAAFGYMGLPLMSGFAAEVFI 423 Query: 411 LFGSF-------QVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLR 463 GSF + PV+T I+ FG+V + Y L + R FG + + EL G + Sbjct: 424 FLGSFGATDTLGTLAPVLTSIAMFGIVIVAGYLLWAMQRTLFGGYELE-TDYELDGAAFH 482 Query: 464 E 464 + Sbjct: 483 D 483 >UniRef50_B0R3V0 NADH dehydrogenase-like complex subunit M n=9 Tax=Halobacteriaceae RepID=B0R3V0_HALS3 Length = 519 Score = 239 bits (610), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 157/416 (37%), Positives = 234/416 (56%), Gaps = 19/416 (4%) Query: 80 HLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLF 139 H+ IDG+S+ +VVL+ +L LA+ +W I++ Q F+ ++ + ++GVF A+D F++ Sbjct: 79 HVGIDGISMPLVVLSTVLTTLAITSAWTPIDERQSQFYALMLLMEASLLGVFTALDFFVW 138 Query: 140 FFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVF----V 195 F FWE +LVPMYFLI +WG G R AA KFF+YT + L+M I +ALVF Sbjct: 139 FVFWEFVLVPMYFLIGIWG-----GPRRKYAAIKFFVYTNVASLLMFIGFMALVFGLDVT 193 Query: 196 HYNATGVWTFNYEELLNTPMSSGVEYLLMLGFF---IAFAVKMPVVPLHGWLPDAHSQAP 252 + + + T G E L + FF I FAVK+P VPLH WLPDAH QAP Sbjct: 194 TMDMPAIAQAIHAGQFGTTYGLGAETLKTVAFFAMFIGFAVKVPTVPLHTWLPDAHVQAP 253 Query: 253 TAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFA-PIAMWLGVIGIFYGAWMAFAQTDI 311 T SV LAG+LLK Y LLRF+ + P + ++A PIA L V+ + YGA +A AQ D+ Sbjct: 254 TPASVMLAGVLLKMGTYALLRFNFTMMPGIAQQYAVPIAA-LAVLSVIYGAMLALAQRDL 312 Query: 312 KRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDM 371 KR++AY+SVS MG+V++ + + GA QM+AHGL + +F+ G +Y HTR + Sbjct: 313 KRIVAYSSVSSMGYVILGLVAYNYYGVGGATFQMVAHGLISGLMFMCVGVIYNTAHTRMV 372 Query: 372 RMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV----VPVITVISTF 427 + G+ KM A+ + A +G+P F GE I G F + T ++ F Sbjct: 373 GDLSGIADKMPVTAAVFIAAAFGYMGLPLMAGFAGELFIFLGGFGADFAHAQLFTALAMF 432 Query: 428 GLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQ 483 G+V + Y L + R FG ++ +P +L + I+ L++L+++ G P Sbjct: 433 GIVIVAGYLLFAMQRVLFGPFAAETDYDIVPA-ALHDTVPIVALLLLVIVAGTVPN 487 >UniRef50_B4U8I0 Proton-translocating NADH-quinone oxidoreductase, chain M n=3 Tax=Aquificaceae RepID=B4U8I0_HYDS0 Length = 501 Score = 239 bits (609), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 157/441 (35%), Positives = 259/441 (58%), Gaps = 28/441 (6%) Query: 68 DMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIE------KYQGFFHLNLM 121 + P I GIS + +DGLS + +L+ + LA+ S K+I+ +Y F L Sbjct: 68 NYPIIKELGISYVVGVDGLSEVFYILSTFISFLAIAWSVKDIQIKSRLKEYYSMFLLTTT 127 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 ++ IGVF A D+ LF+ F+E+ LVPM F+I +WG+K R+ +A KFFIY S Sbjct: 128 FL----IGVFTAWDLILFYIFYELTLVPMIFVIGVWGYK-----LRLYSAYKFFIYIFIS 178 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 L +L I+ L + TG + Y L++ + + L L FFIAFAVK P+VP H Sbjct: 179 SLFLLFGIMILSADSFKQTGHFNAFYPTLVHLHLPLNEQIFLFLLFFIAFAVKTPLVPFH 238 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLPDAH +APTAGSV LA ILLK +Y LRF++ LFP A+ + +++G++ I Y Sbjct: 239 TWLPDAHGEAPTAGSVVLAAILLKMGSYAFLRFNIGLFPEAAKHLWLVMVFIGILTIIYA 298 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 +WM AQ +IKR +AY+SVSHMGF++ A++ + ++ +V++M AHG S+A LF++ G Sbjct: 299 SWMTIAQNNIKRFVAYSSVSHMGFIVAAMFMLNFQGFRASVLEMAAHGFSSASLFMIAGF 358 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAV---ATLGMPGTGNFVGEFMILFGSFQ-- 416 +Y R+H+ + + + G ++++P S+ A+ + +G+PG +F G+F+ + + + Sbjct: 359 IYNRLHSFNTKTIAG---SVRYMPIFSILVALTGFSAMGLPGGSSFWGKFLTIVSAKEHS 415 Query: 417 -VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLL 475 + +I ++S F F+++Y L L R F + K++ + + +L ++L LVVL+ Sbjct: 416 LDLALIVIVSAF---FSAIYMLYFL-RNLFLEGKTEGSFLIFTDIRGIKLTVMLSLVVLM 471 Query: 476 VLLGFYPQPILDTSHSAIGNI 496 +G +P + ++I N+ Sbjct: 472 FTIGLFPFLFFNIFDASISNM 492 >UniRef50_C7M2U9 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2U9_ACIFD Length = 512 Score = 238 bits (606), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 172/507 (33%), Positives = 281/507 (55%), Gaps = 41/507 (8%) Query: 2 LLPWLILIPFIGGFL----------CWQTERFGVKVPRWIALITMGLTLALSLQLWLQGG 51 LL WL+ +P IG + W FG+ ++++ +G+ + L+++ + Sbjct: 3 LLDWLVAVPVIGALIVPMMALPREQAWLVRAFGIA----MSIVELGIAVLLAVRFHI--- 55 Query: 52 YSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAV--LCSWKEI 109 G P +Q D+ W+ G+ +L DG+SL++V++T +L V+A+ + ++ Sbjct: 56 -------GAPGFQDTQDLRWMGALGVHWYLGADGISLVLVIMTAVLFVIAMAAIKGVTDV 108 Query: 110 EKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRIT 169 Y G+ ++ + +G F+++D+ LFF F+E+ LVP YFLIA +G S Sbjct: 109 RAYVGW----MLLLEAACMGSFVSLDLLLFFVFFELSLVPAYFLIADFGFLGSG-----R 159 Query: 170 AATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFI 229 AA KFF+YT A ++L+ I+ALV +H + TG TF L +T +++ LL L F Sbjct: 160 AAIKFFVYTFAGSALLLVGIIALVVIHDHQTGNLTFALPALEHTRLAASTSLLLFLAFTA 219 Query: 230 AFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPI 289 AFAVK P+ P H W PD +++AP V +AG++ K +YG++RF L LFP S + A + Sbjct: 220 AFAVKTPIFPFHTWSPDTYAKAPIPAVVIVAGVMAKLGSYGIVRFDLGLFPGTSRQLAWL 279 Query: 290 AMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHG 349 + L V GI +GA +A + + RL+ Y+S+SHMGF+++ I+ S G+V+QM+ HG Sbjct: 280 MLTLAVAGILWGAIVAAGERHLGRLVGYSSLSHMGFIVLGIFAFSTEGLAGSVLQMVNHG 339 Query: 350 LSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFM 409 + A +F+L G +Y+R T D +GGL L +A G+PG FVGEF+ Sbjct: 340 IYTAAMFLLLGMIYDRSGTLDASRLGGLQRHAPVLAGAFTVVVMAQAGLPGLNGFVGEFL 399 Query: 410 ILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMIL 469 IL G+F V++ G+V ++ Y L R F +A S+ + + + RE+ +I Sbjct: 400 ILVGTFVTHRWWAVVAVAGVVGSAAYLLWAYQRV-FHRAPSE--DRVVHDLQWREVALIA 456 Query: 470 LLVVLLVLLGFYPQPIL---DTSHSAI 493 L+ ++V LG YP+P+L D + SAI Sbjct: 457 PLLAIIVFLGVYPRPVLSAIDPATSAI 483 >UniRef50_Q9G8P5 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Naegleria gruberi RepID=Q9G8P5_NAEGR Length = 474 Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 164/435 (37%), Positives = 242/435 (55%), Gaps = 31/435 (7%) Query: 69 MPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSW--------KEIEKYQGFFHLNL 120 + +I F S IDG+S+ + L+ L L +L S+ E++ YQ L Sbjct: 46 IQYINLFEYSFLFGIDGISIFFIYLSTFLIPLCLLFSFYNMKQKGVSEVKMYQS----FL 101 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 L +I VF A+D+ +F+ +E++L+P + LI + ++ K RI A+ FF YT Sbjct: 102 FLTLFLLIFVFSALDILVFYIMFEIILIPFFVLIGVSSYR----KRRIHASYLFFFYTLV 157 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 +MLI+I +L Y+ TG T N E LLN S E ++ L FFI+FA+K+P+ P Sbjct: 158 GSFLMLISIFSL----YSFTG--TSNIEVLLNNQYSFYRENIVWLTFFISFAIKIPMFPA 211 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H WLP+AH +APT GSV LAG+LLK +YG LRF +PLFPN++ ++P+ + + +GIFY Sbjct: 212 HIWLPEAHVEAPTEGSVLLAGVLLKLGSYGFLRFLMPLFPNSTYYYSPLVILIACLGIFY 271 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 +++ Q DIKR+IAY+SVSHM ++ ++T L G++ MIAHGL + GLF L G Sbjct: 272 TSFVTLKQIDIKRIIAYSSVSHMNVCILGLFTFHSLGIAGSIHLMIAHGLVSGGLFFLVG 331 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 LY R HT+ ++ GL M F ++ + P T NF+GEF+I+ G F Sbjct: 332 MLYNRHHTKLLKYYSGLVYTMPLFSFFFFIFIISNISFPLTSNFIGEFLIIVGLFLSFNY 391 Query: 421 ITVISTF-GLVFASVYSLAMLHRAYFGKAKSQIAS--QELPGMSLRELFMILLLVVLLVL 477 + T G+ +VYSL + ++ F K Q +L + LF+IL V + Sbjct: 392 YALFFTLVGVFICTVYSLWLYNKLVFMIPKYQYIKYYNDLSFLECSLLFIILFFV---LW 448 Query: 478 LGFYPQ---PILDTS 489 LG YP ILDTS Sbjct: 449 LGIYPYSIFSILDTS 463 >UniRef50_Q1AZS5 Proton-translocating NADH-quinone oxidoreductase, chain M n=3 Tax=Bacteria RepID=Q1AZS5_RUBXD Length = 487 Score = 234 bits (598), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 154/431 (35%), Positives = 245/431 (56%), Gaps = 20/431 (4%) Query: 68 DMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGV 127 ++ WIP G++ + +DG+SL +V++T +L ++++ S E+ + + L L+ + Sbjct: 63 EVAWIPSLGVAYRVGVDGISLPLVLMTAVLFFVSLVFSAGIRERARSYVALFLL-LETAS 121 Query: 128 IGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLI 187 +GVF+A+D LF+ F+E+ LV MYF+I+ WG++ R AA FF+YT + + Sbjct: 122 LGVFVALDAVLFYVFFEVTLVGMYFIISGWGYE-----DRQRAALMFFLYTL----LGSL 172 Query: 188 AILALVFVHYNATGVWTFNYEELL-NTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPD 246 +L + Y + TF+ EL+ N P++ L +L + F VK PV PLH WLP Sbjct: 173 PLLLAILGLYLGSEPNTFDMRELIANPPLTGLAATLALLAMLVTFFVKTPVFPLHTWLPA 232 Query: 247 AHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAF 306 AH +APTAGSV LAG+LLK YGL+RF+L + P+A + AP L YGA++A Sbjct: 233 AHVEAPTAGSVILAGVLLKLGTYGLVRFALQMTPDAFRDLAPYVAALAAFSALYGAFVAL 292 Query: 307 AQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAY------QGAVIQMIAHGLSAAGLFILCG 360 Q+D+KRL+AYTSV+HMG+V++ + + GAV+QM++HG+ LF+L G Sbjct: 293 GQSDLKRLVAYTSVNHMGYVVLGVAVAAAATGARAVALDGAVLQMVSHGVVTGALFLLVG 352 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 L +R HTR+M GGL + L + A A+LG+PG +F EF I G+ +V P Sbjct: 353 MLQDRAHTREMGAFGGLLGVVPGLGWAFVLAAFASLGLPGLAHFPAEFQIFLGTLRVYPP 412 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 V++ G+ + L + A+ G+ + + ++L + RE ++ L+ L VL+G Sbjct: 413 -AVVAVLGIAVTAGLYLRAIQVAFLGEPRGE--RRKLRDLGARETLAVVPLLALTVLIGV 469 Query: 481 YPQPILDTSHS 491 P L H+ Sbjct: 470 VPSLALGVIHA 480 >UniRef50_Q1AVJ1 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVJ1_RUBXD Length = 484 Score = 234 bits (598), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 158/473 (33%), Positives = 256/473 (54%), Gaps = 20/473 (4%) Query: 22 RFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHL 81 R ++ R+ A+ + + L+L ++ G L P E + WI I + Sbjct: 21 RGDERLVRYAAIGVAAVPVLLALYIYFAFGDDLDA----PALSQE--LTWIESLDIGYRV 74 Query: 82 AIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFF 141 +DG+ M L+ LL ++AV+ SW +I + GF+ L G++GVF + D+ LF+ Sbjct: 75 GLDGIGFGMFFLSALLTLIAVVASW-DIRENLGFYFALLFLAEVGMLGVFASRDLVLFYV 133 Query: 142 FWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATG 201 F+E+ L+PMY ++ +WG + R AA KFFIYT ML LAL + Sbjct: 134 FFEITLIPMYLMVGIWGDE-----NRRAAAIKFFIYTFLGSTAMLAGFLALGVLS----- 183 Query: 202 VWTFNYEELLNTP-MSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLA 260 TF+ EL +S + + + +K+P VPLHGWL D + +P + +V L+ Sbjct: 184 -GTFSIPELGEAGGLSRAAQIAIAVPVLFGLLIKVPAVPLHGWLLDVYVSSPVSTNVVLS 242 Query: 261 GILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSV 320 G+L K +G+L+ ++PL P+ F P LGVI I YGA++AF Q D+K L+AY+S+ Sbjct: 243 GVLPKLGTFGILKIAIPLLPDGVEPFLPYLAVLGVINIIYGAFVAFLQPDLKALVAYSSI 302 Query: 321 SHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSK 380 +GF+L+ + + + Y GAV Q +AHGL +A LF+L G + R TR + +GGL ++ Sbjct: 303 GTLGFILLGAASANAVGYNGAVFQQVAHGLYSALLFLLVGIIAARTGTRRISELGGLAAR 362 Query: 381 MKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAML 440 M W L A+A +G+PG FV EFM + G + PV V++ G++ +++Y L ML Sbjct: 363 MPWAGGLLALGALAAMGLPGLAVFVSEFMSIMGGYTTYPVQGVLAALGIILSAMYLLYML 422 Query: 441 HRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAI 493 R FG + + A +++ E+ ++ L LL++LGF+P ++ A+ Sbjct: 423 ARVIFGPIR-EPAYEQIGDAGPVEMAAVVPLAALLLVLGFFPALLISVQRPAV 474 >UniRef50_A1API0 Proton-translocating NADH-quinone oxidoreductase, chain M n=2 Tax=Pelobacter propionicus DSM 2379 RepID=A1API0_PELPD Length = 534 Score = 234 bits (596), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 144/446 (32%), Positives = 254/446 (56%), Gaps = 21/446 (4%) Query: 60 IPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLN 119 +P + ++PW+ GI+ HLA+DGL++ +++LTGLL + + C WK E F Sbjct: 61 LPASLLDLNIPWVGSLGINFHLAVDGLNIYLLLLTGLLFPVVLGCCWKRPETQNNLFVAM 120 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 +++ ++G FLA ++ LFF FWE++L+PM+ ++ +G G+ + +AA FF+YT Sbjct: 121 ALFLEATLLGTFLAQNLMLFFVFWEVVLIPMFIIVLAFG-----GENKRSAAFTFFMYTM 175 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 A ++ L A++ + N TG W F + L+ + + + + +A A+K P+ P Sbjct: 176 AGSILFLAAVIMMGMESLNQTGAWNFEFAHLMALKLDWNTQLFVFIAVMLACAIKCPLFP 235 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 H WLP A+ +AP AG+ +AG L K A+G+++ +LPL P+ + F P M VI I Sbjct: 236 FHSWLPLAYYEAPPAGTALMAGALSKMGAFGIIKLALPLCPDVARAFGPTVMLFAVISIL 295 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 YGA +A QTD K+L+A++S+SHMG++++ I++ Q A GA+ Q+++HG++ AGLF+L Sbjct: 296 YGAIIALKQTDFKKLVAFSSLSHMGYIVLGIFSFHQAAIHGALFQILSHGVAVAGLFLLL 355 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ--- 416 G L R+ + + L + L + + F +A++ +P T F EF+ILFG+FQ Sbjct: 356 GLLELRLGREYLNLT-ALSTHAPRLAVMLMLFILASVALPLTSGFTSEFLILFGAFQQGI 414 Query: 417 ---------VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFM 467 + ++++ G+V + Y L +G+ K + ++ MSL E Sbjct: 415 AALQANQGATMLTSVLLASTGMVLGATYMLRFGRAILYGQTKEGVGVKD---MSLMEGIG 471 Query: 468 ILLLVVLLVLLGFYPQPILDTSHSAI 493 + L+V+++ +G P PI++ +A+ Sbjct: 472 FIPLLVMIIWIGVNPMPIMNKVTTAV 497 >UniRef50_Q3JBP3 Proton-translocating NADH-quinone oxidoreductase, chain M n=4 Tax=Proteobacteria RepID=Q3JBP3_NITOC Length = 485 Score = 234 bits (596), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 145/407 (35%), Positives = 233/407 (57%), Gaps = 10/407 (2%) Query: 57 SAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFF 116 A P++Q PW P G LA+DGL+L MV+L LL +A+L S+ ++ +G+ Sbjct: 52 DASSPEFQLVELKPWNPELGSHYALAMDGLALPMVLLATLLSFIAILASYNMTDRPKGY- 110 Query: 117 HLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFI 176 ++ ++ + GV+GVF+A D LF+ FWE+ L+PM+FLI WG GK R A+ F + Sbjct: 111 NIAMLVLECGVLGVFMAEDWALFYVFWELTLIPMFFLIDQWG-----GKRRQMASLNFVL 165 Query: 177 YTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMP 236 YT + ML+++L + + + P+ + L+ LG I F VK+P Sbjct: 166 YTMGGSVFMLVSLLIIYTSSSEHSTTIAAMTQAASQMPLDK--QILVFLGLLIGFGVKVP 223 Query: 237 VVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVI 296 + PLHGWLP AH +AP+ S+ L+GILLK AYGL+R ++ + P+A+ P+ L + Sbjct: 224 IFPLHGWLPLAHVEAPSPVSILLSGILLKMGAYGLIR-AIGMLPDAALALQPLLAGLALF 282 Query: 297 GIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLF 356 I YG +A+ Q+D+K +IAY+S+SHMG V++ I ++ + GA +QMIAHGL A LF Sbjct: 283 SIVYGGLLAWRQSDLKAMIAYSSISHMGIVILGISALNEAGFLGATMQMIAHGLVAGSLF 342 Query: 357 ILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ 416 +L G LY+R H+R++ L M + +A++G+PG F E L GSF+ Sbjct: 343 LLIGLLYDRTHSREVADYSSLVQVMPKFALFTTLALLASIGLPGLVGFPAELHALIGSFE 402 Query: 417 VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQI-ASQELPGMSL 462 ++ + G+V ++ Y++ + R + G + ++ A ++L G L Sbjct: 403 RWGWWVLLVSLGVVISAAYAMRTIVRLFTGPVRPEMRALKDLHGTEL 449 >UniRef50_A7NL13 Proton-translocating NADH-quinone oxidoreductase, chain M n=2 Tax=Roseiflexus RepID=A7NL13_ROSCS Length = 566 Score = 232 bits (592), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 190/569 (33%), Positives = 284/569 (49%), Gaps = 83/569 (14%) Query: 4 PWL---ILIPFIG-------GFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYS 53 PWL IL P IG G L + W + LAL++ +W+ G+ Sbjct: 10 PWLTLLILSPLIGLALTGLAGALRLDDRTVKIGATAWSTI-----PLALAIVVWV--GFD 62 Query: 54 LTQSA---GIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIE 110 +A G+ Q+ + +PW+ + + +DG+S+ +V+LT + +A+L S+ Sbjct: 63 PNATADGQGVVQFVEK--IPWVQAIRVDYFVGVDGISMPLVILTAAMAPVAMLASFGITG 120 Query: 111 KYQGFFHLNLMWIL-GGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHK----ASDGK 165 + + ++ LM++L ++G FLA++ F FF FWE LVP YFLI WG + A + Sbjct: 121 RVK--LYIALMFLLEAAMLGYFLALNFFFFFIFWEFSLVPAYFLIQGWGRRHGADADPEQ 178 Query: 166 TRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVE----- 220 R AA KFF+YT A + ML+ + +V A G+ TF+ L VE Sbjct: 179 RRRDAALKFFVYTMAGSIGMLL-LFQFFYVATAAAGIPTFDLITLARLGQGLTVERAALD 237 Query: 221 ------------YLLMLGF-------------------FIAFAVKMPVVPLHGWLPDAHS 249 Y+ LG FIAFA+K+ + P H WLPDA+S Sbjct: 238 PVNLTLREIIFNYVEQLGIAAVLGRYPLLYTSIAFWAIFIAFAIKLGIWPFHTWLPDAYS 297 Query: 250 QAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQT 309 +APTA S+ LA ++ K AYG+LR LP P+A+ F P L +IG+ GA+ A Q Sbjct: 298 EAPTAASILLAAVMSKMGAYGMLRLMLPFVPDAAQYFGPAIGALALIGVVAGAFGALGQV 357 Query: 310 --DIKRLIAYTSVSHMGFVLIAIYTGSQL----------AYQGAVIQMIAHGLSAAGLFI 357 D+KRLIAYTS++HMG+V +AI + + A GA+ QM+AHGLS LF+ Sbjct: 358 GGDLKRLIAYTSINHMGYVGLAIAAAATVGSADSATRATAINGALFQMVAHGLSTGALFL 417 Query: 358 LCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV 417 L G L ER + +M + GL + M A LG+PG FVGEF I G + Sbjct: 418 LAGMLAERCGSDEMGTLAGLRTTMPVFAGAMGVATFANLGLPGLAGFVGEFFIFRGVWAS 477 Query: 418 VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSL--RELFMILLLVVLL 475 +P+ +++T GLV ++ L M + + GK + A +P M L RE + L++ L Sbjct: 478 LPLFALLATIGLVVTALALLRMYGQLFHGKTNERSA---MPDMRLAGREFLAVAPLLIAL 534 Query: 476 VLLGFYPQPILDTSHSAIGNIQQWFVNSV 504 ++LG YP PI+D S+ + + F V Sbjct: 535 LILGVYPAPIMDLSNRTATALVEVFTRVV 563 >UniRef50_UPI00016C46D6 proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C46D6 Length = 636 Score = 232 bits (592), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 144/442 (32%), Positives = 231/442 (52%), Gaps = 34/442 (7%) Query: 77 ISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDM 136 + +L +DGL+L +V L ++ V +L SW+ ++ G F+ L + GVIG FL+ D+ Sbjct: 119 VQFYLGVDGLNLWLVALASVMLVPVILVSWESVQHRPGAFYGWLFVLQAGVIGAFLSFDV 178 Query: 137 FLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVH 196 LF+ F+E+ L+P +FLI WG ++ R AA KFF+YT A L+ L+ ++ +V + Sbjct: 179 VLFYVFFELTLIPSFFLIGNWGATSA----RRDAARKFFLYTLAGSLLTLVGVIGVVLTN 234 Query: 197 YNATGVWTFNYEELLNT--------------------PMSSGVEYLLMLGFFIAFAVKMP 236 + G TF+ +L+ ++ L L F VK+P Sbjct: 235 PSEDGTITFSIPKLMANVQEGMHAAHLKALAGDGSALAAKHQTQFWLFLALMAGFMVKVP 294 Query: 237 VVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFA-PIAMWLGV 295 + P H WLP A+ +APT ++ L+ ++ K +G+LR LPL P+A+ ++ P+ Sbjct: 295 IWPFHTWLPSAYGEAPTGVTMLLSALMAKLGTFGILRLVLPLVPDAAIQYGLPVIGGFAA 354 Query: 296 IGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGL 355 GI Y A A+A D+K +IAY+SVSH+GF+++ ++ ++ G+ + M+ HGLS L Sbjct: 355 FGIVYAALCAYASKDMKLVIAYSSVSHLGFLVLGLFAFNREGLAGSALHMVNHGLSTGAL 414 Query: 356 FILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSF 415 F G L +R T D+ GGL + L A+A++G+PG NFV E M+L G F Sbjct: 415 FASLGFLMDRYRTTDIAKFGGLMGRYPNFAILFFALALASVGLPGLNNFVSEMMMLAGLF 474 Query: 416 QVVP------VITVISTFGLVFASVYSLAMLHRAYFGKAKS-QIASQELPG--MSLRELF 466 + V++ G+ ++ Y ML +F K + A+ E P +S RE F Sbjct: 475 DARSPGLKSLALAVVAATGIFLSAWYVFTMLRAVFFNPLKEPERAAPEAPAGDVSRREFF 534 Query: 467 MILLLVVLLVLLGFYPQPILDT 488 L L ++LG PQP+LD Sbjct: 535 AFGSLAALCLVLGLLPQPLLDA 556 >UniRef50_A5UXL0 Proton-translocating NADH-quinone oxidoreductase, chain M n=6 Tax=Chloroflexi (class) RepID=A5UXL0_ROSS1 Length = 507 Score = 230 bits (587), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 157/464 (33%), Positives = 257/464 (55%), Gaps = 20/464 (4%) Query: 38 LTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLL 97 ++LAL+L ++L Y Q Q+Q ++PW+P GI+ L +DG+SL M++L GL+ Sbjct: 48 ISLALTLLVYLAYDYRSPQ-----QFQFLEEVPWLPELGINYILGVDGVSLPMLLLNGLV 102 Query: 98 GVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALW 157 L SW E+ + ++ L L+ + GV GVF+++D+FL F F+E+ ++PMY LI +W Sbjct: 103 IFTGALISWNIEERTREYWALLLL-LAAGVYGVFVSLDLFLLFIFYELAVLPMYLLIGIW 161 Query: 158 GHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPM-S 216 G + A K +Y + IL +V V+Y+ T + TF+ L + + S Sbjct: 162 GSTRKE-----YGAMKLTLYLMGGSAFI---ILGMVAVYYSGT-LRTFDMRLLAQSALFS 212 Query: 217 SGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSL 276 V+ + + F+ FAV + P H W P H APTA S+ AG+L+K AYG LR ++ Sbjct: 213 RDVQIVFFVPLFLGFAVLAGMFPFHTWSPTGHVAAPTAVSMLHAGVLMKLGAYGCLRVAM 272 Query: 277 PLFPN-ASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQ 335 +FP AS PIA+ +I YGA +A Q D K +I Y+SVSHMG L+ + + Sbjct: 273 WIFPEGASYWLLPIAI-ATLINAVYGASIAMTQRDFKFMIGYSSVSHMGLTLMGLAAANT 331 Query: 336 LAYQGAVIQMIAHGLSAAGLFILCGQL-YERIHTRDMRMMGGLWSKMKWLPALSLFFAVA 394 + GAV+QM AHG+ A F + G++ Y+R HTR +GGL++ M + + + ++ Sbjct: 332 IGITGAVLQMFAHGVMTALFFAVVGRMVYDRTHTRQFPELGGLFNVMPFAAIVFIIAGLS 391 Query: 395 TLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIAS 454 ++GMPG F EF I G +Q P+I V++ + + Y L ++R +FG+ K+ Sbjct: 392 SMGMPGLAGFWAEFNIFMGMWQRFPLIAVLAGISIPITAGYILLAVYRVFFGELKNP-EF 450 Query: 455 QELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQ 498 + LPG++ E +L +L++ G YP + + +++ I + Sbjct: 451 RRLPGLTTPEYVAGAILAAVLIVSGIYPAYLTEPIEASVRPIAE 494 >UniRef50_A1SE39 Proton-translocating NADH-quinone oxidoreductase, chain M n=3 Tax=Propionibacterineae RepID=A1SE39_NOCSJ Length = 509 Score = 230 bits (587), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 169/505 (33%), Positives = 268/505 (53%), Gaps = 28/505 (5%) Query: 3 LPWLI---LIPFIGGFLCWQTER-FGVKVPRWI----ALITMGLTLALSLQLWLQGGYSL 54 LPWL ++P +G + R G +P+ + AL+T+ + +A+++Q G L Sbjct: 4 LPWLTALWVLPLVGALVTAFVPRATGSALPKQVGLLFALLTLAVGIAIAVQYDTGDGMQL 63 Query: 55 TQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIE-KYQ 113 T++ WI FG++ L +DGL LL++++T L L ++ +W + + + Sbjct: 64 TET-----------HTWIEAFGVNYALGVDGLGLLLILMTVALVPLVLVATWNDADDRSS 112 Query: 114 GFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATK 173 F + + + VF A D+FLF+ +E L+P YFLI +G G+ R AA K Sbjct: 113 AAFVAWALALESFSLAVFAATDVFLFYMVFEATLIPAYFLIGRFGQA---GRGR--AALK 167 Query: 174 FFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAV 233 F +Y GLV+L +++ L V +A G ++ +L +S+ E L +GF IAFAV Sbjct: 168 FLMYQLGGGLVLLASVIGLYVVSADA-GNPSYLLSDLQQLDLSTNTERWLFVGFMIAFAV 226 Query: 234 KMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWL 293 K P+ PLH WL D +A SV L IL K +G+LRF L LFP AS P+ + L Sbjct: 227 KAPLFPLHTWLADTTEKATPGTSVLLVCILDKIGTFGMLRFGLGLFPEASQWATPVVVAL 286 Query: 294 GVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAA 353 ++ I YGA +A Q DI RLI TS+SH GF+ + I+ S GA++ M+ HG+ A Sbjct: 287 ALVSIVYGALVAIGQDDILRLIGLTSLSHFGFITLGIFAFSSQGGSGAILYMVNHGVGTA 346 Query: 354 GLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFG 413 LF++ G L R T+ + + G+ +K L L L ++TLG+PG FV E ++L Sbjct: 347 ALFLIAGYLIRRKGTQLISQIAGVETKAPLLAGLFLVAGLSTLGLPGLSQFVSEILVLIS 406 Query: 414 SFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVV 473 +F + I+ G+V A++Y L + R G A + + ++ REL ++ L+ Sbjct: 407 AFDYHWWVGAIAVTGIVLAAIYVLWLYQRTMTGPATP--GDEAMTDLNRRELVAVVPLIA 464 Query: 474 LLVLLGFYPQPILDTSHSAIGNIQQ 498 LV GF+P P+LD S+ + ++ Q Sbjct: 465 ALVFFGFFPMPLLDVSNPTVDSLLQ 489 >UniRef50_Q37375 NADH-ubiquinone oxidoreductase chain 4 n=2 Tax=Eukaryota RepID=NU4M_ACACA Length = 497 Score = 230 bits (586), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 133/390 (34%), Positives = 218/390 (55%), Gaps = 10/390 (2%) Query: 58 AGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFH 117 A + +F W+ + + +D +SLL ++LT L + +L SW I+ F Sbjct: 66 AEFDIYNFQFYKQWLFLYNFHYVIGMDNISLLFLLLTFFLTPICILISWNSIKYRYNSFI 125 Query: 118 LNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIY 177 + L++I + +F +D+ F+ F+E +L+PM+ LI +WG + + +I A + F Y Sbjct: 126 ICLIFITFILFNIFCVLDLVFFYIFFESILIPMFILIGVWGSR----QRKIHAVYQLFFY 181 Query: 178 TQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPV 237 T ++++ + +++ H T + L NT S + +L FF AF VK+P+ Sbjct: 182 TLLG-SLLMLLGILVIYSHIQTTDI-----RVLYNTNFSFYRQLILWASFFFAFCVKVPL 235 Query: 238 VPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 P H WLP+AH +APT GSV LAG+LLK YGLLRF +P+F +A+ F P+ L ++G Sbjct: 236 FPFHIWLPEAHVEAPTVGSVILAGVLLKLGTYGLLRFVIPIFCDATYFFLPLVYTLCLLG 295 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 I Y Q D+K++IAY SVSHM FV++ ++T + G+V M++HG+ ++GLF Sbjct: 296 IIYTCCSTIRQVDLKKVIAYASVSHMSFVILGLFTSNIQGIGGSVFLMLSHGIVSSGLFF 355 Query: 358 LCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV 417 G +Y+R TR +R GL S M ++ + PGT +F+GEF+IL G F+ Sbjct: 356 CIGCVYDRYKTRILRYYSGLVSTMPIFSLCLFILILSNISFPGTSSFIGEFLILLGLFEN 415 Query: 418 VPVITVISTFGLVFASVYSLAMLHRAYFGK 447 +I+TF ++ +VYS+ + +R F + Sbjct: 416 NHFAALIATFSIILTAVYSIWLYNRIIFNR 445 >UniRef50_C0VVK4 NADH dehydrogenase subunit M n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VVK4_9CORY Length = 521 Score = 230 bits (586), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 151/440 (34%), Positives = 241/440 (54%), Gaps = 15/440 (3%) Query: 64 QSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKE-IEKYQGFFHLNLMW 122 Q ++PWIP G L +DG++L MV+LT +L + +L S E Q H L + Sbjct: 55 QYTVEIPWIPALGAYYALGVDGIALAMVLLTAILTPIVILYSGTEHYRADQMGEHAFLGF 114 Query: 123 IL---GGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 +L G I VF + D+ LF+ F+E L+PM+FLI +G G+ R AA KF +Y+ Sbjct: 115 VLAIEGLSIFVFSSTDVLLFYLFFEATLIPMFFLIGGFG-----GENRRYAAIKFLLYSL 169 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 SGL+ML AI+ + V G TF +L + + V L +GF IAF VK P+VP Sbjct: 170 GSGLLMLAAIIGVYIV-----GDGTFLLSDLQDADLGGTVGMWLFVGFMIAFIVKAPMVP 224 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 H WLPDA G+V + I+ K +G++RF++ LFP A+ F + +WL VI + Sbjct: 225 FHTWLPDAAENTTPGGAVMMVAIMDKIGTFGMIRFAMCLFPEATEYFRNVMIWLAVISVI 284 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 +GA A AQT++ R +AYTSVSH GF+++ ++ ++ A A + M HGLS A LF++ Sbjct: 285 WGALAALAQTNLMRFVAYTSVSHFGFIVLGMFAVNETAVSAASLYMFNHGLSTAMLFLVV 344 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP 419 G + +R T D+ GG+ L L ++ + +PG FV EF ++ G+F P Sbjct: 345 GYMIKRRSTADIHAFGGVQKVAPLLGGYLLIALLSAVALPGLAPFVSEFGVIAGTFNGAP 404 Query: 420 VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLG 479 I+ +V A+ Y + + G+ ++ + +P ++ E +++ L+VLL++ G Sbjct: 405 WAAGIAAIAMVLAACYIMRVYKTTMTGEPGDEVI-RTMPDLTHPERWVLAPLIVLLIVFG 463 Query: 480 FYPQPILDTSHSAIGNIQQW 499 YP+P+ + + A N ++ Sbjct: 464 VYPEPLTNLVNPASVNTVEY 483 >UniRef50_B9XFX1 Proton-translocating NADH-quinone oxidoreductase, chain M n=2 Tax=Verrucomicrobia RepID=B9XFX1_9BACT Length = 498 Score = 229 bits (585), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 172/496 (34%), Positives = 266/496 (53%), Gaps = 28/496 (5%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L W I I FIG F+ V+ R +AL+ L L + + Q Sbjct: 1 MLAWTIYISFIGVFVLLLLPAGAVRAARKVALLAAVLGLLGGIS-------GILQHKAPT 53 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 + + +PW+P GI L DG+SL +V+LTG+ V+ +L SW + + FF L Sbjct: 54 EIDTITKVPWVPSLGIEYFLGADGISLTLVLLTGIAAVVGILFSWNIEHRAKEFFAFYLA 113 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 ++GGV GVFL+ D+FL F F+E+ ++P YFLIA+WG + A K +Y+ Sbjct: 114 -LIGGVYGVFLSFDLFLLFVFYELAIIPKYFLIAIWGSTNKE-----YGAMKLALYSFLG 167 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 ++LI ++A Y + V T N EL ++ F+ FA+ + P H Sbjct: 168 SAMVLIGLVA----TYVMSPVKTMNLLELAKYAFPESFQHWAFPLVFVGFAILAGLWPFH 223 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 W P H APTA S+ LAG+++K AYG LR ++ LFP A + + L VIGI YG Sbjct: 224 TWAPTGHVAAPTAASMLLAGVVMKLGAYGALRVAMTLFPQGLAIWKDVIGLLAVIGIVYG 283 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 A +A Q D K +I Y+SVSHMGFVL+ + T + + + GAV+QM +HG+ A LF + G+ Sbjct: 284 AMVALVQKDFKFVIGYSSVSHMGFVLLGLLTLNTIGWSGAVLQMFSHGIIAGLLFGVVGR 343 Query: 362 L-YERIHTRDMRMMGGLWSKMKWLPALSLFFAVATL---GMPGTGNFVGEFMILFGSFQV 417 + Y+R HTR++ ++ L K LP + FA+A+L GMPG F E +L G+++ Sbjct: 344 MVYDRTHTRELPVLKKL-GLSKALPFAACTFALASLASMGMPGFSGFAAELQVLIGAWKA 402 Query: 418 VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQI------ASQELPGMSLRELFMILLL 471 PV V++ FG++ Y+L +L ++F I A+ LP +S+ E +L Sbjct: 403 FPVYAVLAGFGVLVGVAYTLRVLQLSFFNDPTPAIEGEAGEATHPLPTISVPERLGAAIL 462 Query: 472 VVLLVLLGFYPQPILD 487 + + +++G YP+ +LD Sbjct: 463 LGITIVIGIYPKLLLD 478 >UniRef50_O53307 NADH-quinone oxidoreductase subunit M n=26 Tax=Actinomycetales RepID=NUOM_MYCTU Length = 553 Score = 228 bits (582), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 169/534 (31%), Positives = 274/534 (51%), Gaps = 57/534 (10%) Query: 3 LPWLI---LIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAG 59 +PWL L+P G L ++ +W ++ LTLA+S+ + + SA Sbjct: 4 VPWLSVLWLVPLAGAVLIILLPPGRRRLAKWAGMVVSVLTLAVSIVVAAE----FKPSAE 59 Query: 60 IPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI---------- 109 Q+ + WIP FG L +DG+++++V+LT +L L ++ W + Sbjct: 60 PYQFVEKHS--WIPAFGAGYTLGVDGIAVVLVLLTTVLIPLLLVAGWNDATDADDLSPAS 117 Query: 110 -----------------EKYQG---FFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVP 149 E+ +G + L L I V+ +A+D+ LF+ F+E ML+P Sbjct: 118 GRYPQRPAPPRLRSSGGERTRGVHAYVALTLA-IESMVLMSVIALDVLLFYVFFEAMLIP 176 Query: 150 MYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILAL--VFVHYNATGVWTFNY 207 MYFLI +G A G++R AA KF +Y GL+ML A++ L V Y++ TF++ Sbjct: 177 MYFLIGGFGQGA--GRSR--AAVKFLLYNLFGGLIMLAAVIGLYVVTAQYDSG---TFDF 229 Query: 208 EELL------NTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAG 261 E++ V L LGF AFA+K P+ P H WLPDA ++ A +V + Sbjct: 230 REIVAGVAAGRYGADPAVFKALFLGFMFAFAIKAPLWPFHRWLPDAAVESTPATAVLMMA 289 Query: 262 ILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVS 321 ++ K +G+LR+ L LFP+ S F P+ + L +IG+ YGA +A QTD+ RLIAYTS+S Sbjct: 290 VMDKVGTFGMLRYCLQLFPDPSTYFRPLIVTLAIIGVIYGAIVAIGQTDMMRLIAYTSIS 349 Query: 322 HMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKM 381 H GF++ I+ + G+ + M+ HGLS A +F++ G L R +R + GG+ Sbjct: 350 HFGFIIAGIFVMTTQGQSGSTLYMLNHGLSTAAVFLIAGFLIARRGSRSIADYGGVQKVA 409 Query: 382 KWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLH 441 L + A+AT+ +PG F+ EF++L G+F + LV ++VY L + Sbjct: 410 PILAGTFMVSAMATVSLPGLAPFISEFLVLLGTFSRYWLAAAFGVTALVLSAVYMLWLYQ 469 Query: 442 RAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGN 495 R G ++ + + RE+ ++ L+ LL++LG YP+P+LD + A+ N Sbjct: 470 RVMTGPVAE--GNERIGDLVGREMIVVAPLIALLLVLGVYPKPVLDIINPAVEN 521 >UniRef50_A8ERK4 NADH-quinone oxidoreductase, M subunit n=1 Tax=Arcobacter butzleri RM4018 RepID=A8ERK4_ARCB4 Length = 495 Score = 228 bits (582), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 151/501 (30%), Positives = 269/501 (53%), Gaps = 23/501 (4%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L ++I +P + F T R V R IA +T + L L L+++++ + T Sbjct: 5 ILSFIIFLPAVVAFGLMITTR-DVNAIRNIAFLTTTVILGLVLKIYIEFDPNSTM----- 58 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q ++ WI +GI+ ++ +DG SL ++++ +L + L W+ K +G++ +N++ Sbjct: 59 --QFVTNVSWIETYGINYYVGLDGFSLTILMMIAILIPTSYLLLWEG--KTKGYW-INML 113 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + GV G L++D+ LF+FFWE+ML+P++ LI +G ++ K +YT A Sbjct: 114 LVQTGVTGSLLSLDVVLFYFFWEVMLLPVFLLIGQYGFG-----NKVFTTIKVTVYTMAG 168 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLN-TPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 L+MLIAIL L +Y+ G W+F Y++L+ + + + L L F AFA+K+P+ PL Sbjct: 169 SLLMLIAILYLGVAYYSEFGTWSFAYDKLMTISTLDYSTKAWLFLAFLAAFAIKIPIFPL 228 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H W+ + + APT L+ I+ K Y ++RF +P+FP+ EF+ + +G+ G+ Y Sbjct: 229 HTWIMETYKNAPTGAVFLLSSIMAKLGVYAIVRFMIPIFPDIYVEFSTWFVAIGLFGLIY 288 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 A Q DIKR+ AY+S SH+ F+ I++ + GA+ +IAH ++ LF+L G Sbjct: 289 FGIAALMQDDIKRMFAYSSASHLSFISAGIFSLNAYGINGALYLIIAHAIATGALFLLVG 348 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAV---ATLGMPGTGNFVGEFMILFGSFQV 417 + E+ + ++ +GG+ K P + FAV A +G+PGT FV E +I+FG ++ Sbjct: 349 LMQEQTGFKTIKDLGGIAKKA---PIFTFIFAVMLFANVGLPGTNGFVSELLIIFGIYEF 405 Query: 418 VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVL 477 + IS ++ + Y L M RA + + ++E+ + V+L+ + Sbjct: 406 NAYLGYISALTVIIGASYMLWMFQRAILQDRPEGAPELTMRDLKIKEIIGLAPWVILVFV 465 Query: 478 LGFYPQPILDTSHSAIGNIQQ 498 +GFYP+ +D + + Q Sbjct: 466 MGFYPEIFMDKFEPTVTHYLQ 486 >UniRef50_B1ZBB1 Proton-translocating NADH-quinone oxidoreductase, chain M n=5 Tax=Proteobacteria RepID=B1ZBB1_METPB Length = 492 Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 162/425 (38%), Positives = 232/425 (54%), Gaps = 33/425 (7%) Query: 7 ILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSE 66 IL+P + G R + R +AL LTL ++ LW AG QW+ Sbjct: 6 ILLPLLTGLAVLALPRHRPGLVRRVALAGSVLTLGAAVVLW----AGFDPGAGGLQWR-- 59 Query: 67 FDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGG 126 +PWIP G S + + GLSL +++LT +L + ++ E ++ L L+ + G Sbjct: 60 MTLPWIPSLGASYDVGVGGLSLALILLTAILLTVVMVYVLGEHDRAHAHAFLFLL-LATG 118 Query: 127 VIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVML 186 +IG+F A D+ LF+ F+E+ LVPMYF++ +WG G+ R AA KFF+YT+A L ML Sbjct: 119 LIGLFAAQDLLLFYLFFEVGLVPMYFIVGIWG-----GERRRYAALKFFLYTRAGSLAML 173 Query: 187 IAILALVFVHYNATGVWTFNY------EELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 + L L Y A TF+ L TP++ G+ +L +L + F VK+PVVPL Sbjct: 174 LGFLTL----YLAMEPHTFSLPAIVQARPLDRTPLAGGLVFLALL---LGFGVKLPVVPL 226 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H WLPDAH +APT GSV LAG+ LK YG+L LP P+ A F + + L + + Y Sbjct: 227 HNWLPDAHVEAPTEGSVVLAGLQLKMGGYGMLAVLLPTLPDTVARFGWLLVALALASLLY 286 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGS--------QLAYQGAVIQMIAHGLSA 352 GA A AQTD+KRL+AYTSV+HMGFV + + + +LA GA +QM++HG Sbjct: 287 GALAALAQTDMKRLVAYTSVNHMGFVTLGVAVAALAGNEGVRRLALNGAAVQMVSHGFLT 346 Query: 353 AGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILF 412 G+F+L G L R TR++ GGL M L A +LG+PG F+ EF + Sbjct: 347 GGMFLLVGMLQHRAGTRELARFGGLIGSMPAFSGLFGLLAFGSLGLPGLSGFIAEFQAIG 406 Query: 413 GSFQV 417 + Q+ Sbjct: 407 AALQL 411 >UniRef50_C0Z764 NADH-quinone oxidoreductase chain M n=2 Tax=Bacillales RepID=C0Z764_BREBN Length = 510 Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 153/435 (35%), Positives = 247/435 (56%), Gaps = 30/435 (6%) Query: 75 FGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAI 134 F I+ L IDG+S+ +++LT ++G LA + SW +I+K Q + + +L G++GVF A Sbjct: 84 FEINYELGIDGISMPLILLTAIIGTLAAIASW-QIKKRQKEYFILFHLLLIGMLGVFAAD 142 Query: 135 DMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVF 194 ++FLFF F+E+ LVPMYFLI +WG+ R AA KF +Y +ML+A + + Sbjct: 143 NLFLFFIFFELTLVPMYFLIGIWGYG-----EREQAANKFLLYNGIGSGIMLLAFIVIFV 197 Query: 195 VHYNATGVWTFNYEEL---LNTP-------MSSGVEYLLMLGFFIAFAVKMPVVPLHGWL 244 + + T N +E+ L TP ++ + + + L FIAFA+K+PV P H W+ Sbjct: 198 I------MRTLNIDEITAILTTPGHPITEILTPEMRFGIFLVLFIAFAIKLPVFPFHTWM 251 Query: 245 PDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMW---LGVIGIFYG 301 H QAP + + +GILLK AYGLLR + FP + +F+ MW LG+I I YG Sbjct: 252 LRVHVQAPPSIVMIHSGILLKMGAYGLLRMGIGFFPEQAYDFS---MWIAVLGIINILYG 308 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 A +AF Q D+K ++AY+S+SHMG VL+ + + + +QGA+ Q+++HG +A LF L G Sbjct: 309 AVLAFVQKDLKMVLAYSSISHMGIVLLGFASMNTIGFQGAMFQVVSHGFISALLFFLIGV 368 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 +++R T + +GGL M ++ + L +A+LG+PG F+ EF G F +PV+ Sbjct: 369 IWDRTQTSMLDDLGGLAKSMPFVSGVLLAGGMASLGLPGMSGFISEFFAFLGLFGRLPVM 428 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 + G+V +VY L + + FG + L E+ +++L+ ++L+G Y Sbjct: 429 AAVGAIGIVLTAVYLLRAILKTTFGPTPGRCTG--LADAQPMEVIPMVVLLGCIILIGVY 486 Query: 482 PQPILDTSHSAIGNI 496 P + + A+ I Sbjct: 487 PAVLGNPMQQALKTI 501 >UniRef50_A0LEQ7 Proton-translocating NADH-quinone oxidoreductase, chain M n=2 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LEQ7_SYNFM Length = 506 Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 162/470 (34%), Positives = 254/470 (54%), Gaps = 23/470 (4%) Query: 28 PRWIALITMGLT-LALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGL 86 P+ I +++G L L L LWL Y L Q G+ Q+ F W+ GI A+DG+ Sbjct: 49 PKLIKQVSLGFAGLGLVLCLWLYQAYDL-QKGGL-QFVERF--LWVESLGIYYFNAVDGI 104 Query: 87 SLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMM 146 +L M++LT ++ V W + + FF L + ++ GV GVF+++D+F F ++++ Sbjct: 105 NLPMLLLTAVVLFTGVWTMWDLELRVKEFFALVFL-LVAGVYGVFMSMDLFWIFVWYDVS 163 Query: 147 LVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFN 206 L PMY LIA+WG + A K +Y A ++L IL ++ A GV TF+ Sbjct: 164 LFPMYPLIAIWGSTRKE-----YGAMKLTLYLLAGSALILPGIL---YLWAQAGGV-TFD 214 Query: 207 YEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKT 266 EL S + L + F+I F + V PLH W P H APTA S+ AG+L+K Sbjct: 215 LFELQKIGFSPFAQKLAFIFFYIGFGILAAVWPLHTWSPVGHVAAPTAVSMIHAGVLMKL 274 Query: 267 AAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFV 326 AYG+LR + L P A +A + LG +GI YGA++ AQTD+K +I Y+SVSHMG V Sbjct: 275 GAYGILRLGMTLCPEGLAYWADLMALLGTVGIVYGAFVGLAQTDLKYVIGYSSVSHMGMV 334 Query: 327 LIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPA 386 + + T + GAV QM AHG+ A F G +Y+R HT+ + +GGL M P Sbjct: 335 GLGLSTMTVNGINGAVFQMFAHGVMTALFFSAVGYIYDRTHTKMIPDLGGLSRTM---PV 391 Query: 387 LSLFFAVAT---LGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRA 443 S FF VA +G+P +F E ++ + + PV +++ FGLV ++++ L ++ R Sbjct: 392 ASAFFIVAAFSGIGVPCMASFWAELLVFLSAVKTYPVRGILAVFGLVVSALFMLRVVQRT 451 Query: 444 YFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAI 493 ++G+ + A +P + L ++LV +++ G +P+ +LD SA+ Sbjct: 452 FYGERNERWA--HIPDVPLFLATPRIILVSIIIFFGIFPKLMLDVIQSAV 499 >UniRef50_Q9TAK8 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Cafeteria roenbergensis RepID=Q9TAK8_CAFRO Length = 453 Score = 226 bits (577), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 153/460 (33%), Positives = 244/460 (53%), Gaps = 18/460 (3%) Query: 36 MGLTLALSLQLWLQGGYSLTQSA-GIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLT 94 MG +++ +WL + + G+P + + D+ P + + +D LS+ V+L Sbjct: 1 MGTSISFYYCIWLLLKFFESSDIWGLPI-EFQIDLILHPSLNYVLPIGVDSLSIWFVILN 59 Query: 95 GLLGVLAVLCSWKEIEKYQGFFH--LNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYF 152 L+ L++L ++ K GF + L L W G+ G F+ D+ FF F+E+ L+P+Y Sbjct: 60 HLIIYLSLLYTFSTQNKQYGFLYCLLLLQW---GIGGAFMVFDLLGFFIFFELTLIPIYL 116 Query: 153 LIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLN 212 LI ++G + + +I A+ +YT + M I Y T N+ L+ Sbjct: 117 LILIYGSR----ERKIRASYLISLYTLFGSIFMFFNIF------YCFAKFGTTNFFVLMT 166 Query: 213 TPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLL 272 + L + FFIAFA K+P++P H WLP+AH +APT GSV LA +LLK YG+L Sbjct: 167 LDFAPEDAKFLWITFFIAFAAKIPMIPFHIWLPEAHVEAPTIGSVILAALLLKLGTYGIL 226 Query: 273 RFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYT 332 RF L LFP A+ F+P+ +I I + + A Q D+K++IAY+S+ HM VL+ + Sbjct: 227 RFLLHLFPEATLYFSPLINVFALISIVFTSMTAIRQIDLKKIIAYSSIGHMNVVLLGMLV 286 Query: 333 GSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFA 392 S + +G + QM++HG+ A LF + G Y+R R + GG L L F+ Sbjct: 287 PSVESLEGTIFQMLSHGIIAGALFFIVGAFYQRYKVRSLEYFGGFMITAPLLATFFLIFS 346 Query: 393 VATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQI 452 +A + PGT +F+GEFMI FG F+ +I++ +V + Y+L L+R FG KSQ Sbjct: 347 MANISFPGTSSFIGEFMICFGLFEYNSFAVIIASINMVTGAAYTLWALNRVNFGNLKSQY 406 Query: 453 ASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSA 492 ++ E ++ LLV+L++L+G +P IL HS Sbjct: 407 I-LSYGDVNRLEFYIFCLLVILMILMGIFPNFILGILHSV 445 >UniRef50_Q11RU7 NADH:ubiquinone oxidoreductase chain M n=4 Tax=Flexibacteraceae RepID=Q11RU7_CYTH3 Length = 564 Score = 225 bits (573), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 184/540 (34%), Positives = 276/540 (51%), Gaps = 75/540 (13%) Query: 29 RWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIP-RFG------ISIHL 81 RWI++ L L LS+ L++ Q W R G ++ L Sbjct: 32 RWISVAVTALQLCLSIYLFVAFKPEYFQFHSYDSLVYMEKANWFQLRLGNLGVLSVNYFL 91 Query: 82 AIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFF 141 IDGLSL M++L+G++ + SW ++ +G+ L L+ + + G FLA+D+FLFF Sbjct: 92 GIDGLSLSMILLSGIVLLTGACASWNITKQAKGYHALYLLLCIS-IPGCFLALDLFLFFL 150 Query: 142 FWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNA-- 199 F+E ML+PM+FLI +WG G R A+ KFF+YT +++LI + L+ Y+ Sbjct: 151 FFEFMLLPMFFLIGIWG-----GVRREYASIKFFLYTLLGSILILIVFIVLLISTYHPAE 205 Query: 200 ---------------------TGVWTFNY---EELLNTPMSSGVEY-----------LLM 224 +G T N+ L +S+ V Y L + Sbjct: 206 MIEHLADNSGYTIQHIHEGIHSGELTNNFPVVHSLDLIQLSNPVNYFPNGLLGVHNTLTI 265 Query: 225 LGF----------FIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRF 274 G+ + F +K+P P H WLPDAH +APTA SV LAGILLK YGL+R Sbjct: 266 CGYSIRAWCFAALLVGFLIKLPAFPFHTWLPDAHVEAPTAVSVVLAGILLKIGGYGLMRI 325 Query: 275 SLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGS 334 + PLFP +A+ + +GVI I Y A +A AQTD+K++IAY+SVSHMGFVL+ + + Sbjct: 326 AWPLFPQEAADASWWVGLIGVITILYAALVALAQTDLKKMIAYSSVSHMGFVLLGLAAAT 385 Query: 335 QLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAV- 393 GAV QM +HG+ +A LF+L G LY+R H R + GL SKM PA S+ + Sbjct: 386 TEGITGAVYQMFSHGIISALLFLLVGVLYDRTHDRMIPNYRGLISKM---PAYSVVVTIA 442 Query: 394 --ATLGMPGTGNFVGEFMILFGSFQVVPVITVI-------STFGLVFASVYSLAMLHRAY 444 A+LG+PG F+ E +I G+FQ + I +T GL+ ++ Y L L R + Sbjct: 443 FFASLGLPGMSGFIAEILIFIGAFQAKSITATIPQWMPLVATLGLLLSAAYYLWTLQRMF 502 Query: 445 FGKAKSQ--IASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVN 502 FGK + I L +++ E ++ L L++L G +P +LD +++ +F+N Sbjct: 503 FGKFSTHMNIDRNTLTDITVYEKALLYTLCGLIILFGLFPAVLLDKIGASMAAWTAFFIN 562 >UniRef50_Q5EM42 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Mortierella verticillata RepID=Q5EM42_9FUNG Length = 495 Score = 224 bits (572), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 164/499 (32%), Positives = 265/499 (53%), Gaps = 29/499 (5%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTL---ALSLQLWLQGGYSLTQSA 58 +L L IP IG + F K + IT+G T+ +SL +W G + Sbjct: 1 MLTALFFIPLIGAL----SLLFVNKNESLMKRITLGSTIINFVISLVIW--GKFDNNTH- 53 Query: 59 GIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHL 118 + +F W ++ IDG+SL V+LT L + +L SW + + L Sbjct: 54 -----EYQFVQEWAEISFCHFNVGIDGISLFFVLLTTFLFPIIILTSWDHKNNLKSYL-L 107 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 N + + +I F+ +D+ LF+ F+E +L+P++ +I +G D T+ A F+YT Sbjct: 108 NFLILESLLIATFIVLDLLLFYIFFESILIPLFIIIINFG----DLLTKEKAGFLLFLYT 163 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 L ML++I+ + T +++ L + V+ LL +GF IAF VK P++ Sbjct: 164 LFGSLFMLLSIITI------LILTGTTDFQILSTIDFGTDVQKLLFVGFLIAFIVKTPLI 217 Query: 239 PLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 P H WL AH AP GSV LAG++LK A Y LR +P P+A+ F P+ L VI I Sbjct: 218 PGHIWLGFAHVAAPIGGSVLLAGVILKLATYLALRVMIPFLPDATLYFTPLIYTLAVISI 277 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFIL 358 Y + D+K +IAY+SVSHMG V++ +++ + +GAVI +AHG+ + LFI+ Sbjct: 278 IYASLTCLRLIDVKAIIAYSSVSHMGVVVLGLFSNNLQGIEGAVILGLAHGVISPLLFII 337 Query: 359 CGQ-LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV 417 G LY R HTR ++ G+ + M L + F +A + P +GNF+GEFM G+FQ Sbjct: 338 VGDILYTRSHTRIIKYYRGIATSMPILSLIFFFATLANIATPFSGNFIGEFMSFAGAFQQ 397 Query: 418 VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVL 477 P++ ++ G+ + YS+ + +R FG A +++ +P +S RE F++L L+++ + Sbjct: 398 NPIMAILGATGIFLGTGYSIWLFNRISFGTASRYMST--MPDISRREFFVLLPLIIVSFI 455 Query: 478 LGFYPQPILDTSHSAIGNI 496 LG YP +LD+ H I ++ Sbjct: 456 LGIYPNVVLDSLHLGISSL 474 >UniRef50_C6D5D3 Proton-translocating NADH-quinone oxidoreductase, chain M n=3 Tax=Bacillales RepID=C6D5D3_PAESJ Length = 543 Score = 223 bits (569), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 157/475 (33%), Positives = 256/475 (53%), Gaps = 46/475 (9%) Query: 49 QGGYSLTQSA---GIPQWQSEFDMPWIPRFGISIH--LAIDGLSLLMVVLTGLLGVLAVL 103 QGG + ++A +P + + + +S + IDGLSL +V+LT L+ +A Sbjct: 61 QGGNTFEETATWVEVPLNKETQASNGVTNYTLSFQYDVGIDGLSLPLVILTTLITAMAAF 120 Query: 104 CSWKEIEKYQGFFHLNLMWIL---GGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHK 160 S ++++ F+ W L GV+GVF+A D+FLFF F+E+ L+ MYFLI +WG+ Sbjct: 121 ASVHVKKRWKAFY----AWFLLLETGVLGVFMARDLFLFFIFFEITLIAMYFLIGIWGYF 176 Query: 161 ASDGKTRITAATKFFIYTQASGLVMLIAILALVFV------HYNATGVWTFNYEELLNT- 213 R AA +F IY +MLIA + LV ++ +++ +Y ++L Sbjct: 177 -----NRERAANQFVIYNGLGSAIMLIAFILLVNTAGFHIDQDTSSFIYSGSYADILRNL 231 Query: 214 --------------------PMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPT 253 MS + ++ L +AF +K+P++P H W+ H++A Sbjct: 232 SDPSAWVNLAPDQTGGLNPFHMSETMHTVIFLLLVVAFGIKLPILPFHTWMLKVHNEAHP 291 Query: 254 AGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKR 313 A + +G+LLK AYGL+RF + LFP + ++A + LG+ + YGA +AF QTD+K Sbjct: 292 AIVMIHSGVLLKMGAYGLIRFGIVLFPEQAKDWAVVLASLGLANLLYGALIAFRQTDLKL 351 Query: 314 LIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRM 373 ++AY+S+SHMG VL+ + + + QGAV Q+++HGL +A LF++ G LYER T + Sbjct: 352 VLAYSSISHMGIVLLGLAAFNGIGLQGAVFQLVSHGLISALLFLIVGSLYERTKTTTLSE 411 Query: 374 MGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFAS 433 +GGL M ++ + L +A+LG+PG FVGEF+ L G F P I S G++ + Sbjct: 412 LGGLARSMPFISGILLAAGLASLGLPGLSGFVGEFLSLLGLFDSQPWIAGFSVIGVILTA 471 Query: 434 VYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDT 488 VY L + + FG + + + L E +++L+ ++LLG YP + DT Sbjct: 472 VYILRAVLKTTFGPIEERYLG--VKDARLVEALPMIVLLAFILLLGCYPSVLTDT 524 >UniRef50_Q950M6 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Rhizophydium sp. 136 RepID=Q950M6_9FUNG Length = 510 Score = 223 bits (567), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 144/421 (34%), Positives = 231/421 (54%), Gaps = 26/421 (6%) Query: 82 AIDGLSLLMVVLTGLLGVLAVLCSWKEIE-----------KYQGFFHLNLMWILGGVIGV 130 +DG+SL M++L ++ + +L +WKEI+ + + L L+ L +I V Sbjct: 92 GLDGISLWMILLVNIIIPVTILMAWKEIKLDNNPFNSASKMLKNYIFLILLVNLASII-V 150 Query: 131 FLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAIL 190 F D+ LF+ +E +L+PMY LI +G S K A FF+YT L ML+AI+ Sbjct: 151 FFVSDILLFYIAFEAILIPMYLLIGFYG---SRNKRIENAQNTFFLYTLFGSLFMLLAII 207 Query: 191 ALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQ 250 + Y TG + +Y+ +L P+S+ ++ L LGFFIA A+K P P HGWLP AH + Sbjct: 208 TI----YIQTG--STDYQTILTLPISNEIQGFLFLGFFIALAIKTPSFPFHGWLPLAHGE 261 Query: 251 APTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTD 310 + T SV LA ILLK A YG+LRF LPLFP AS F P+ + L ++ I Y A + D Sbjct: 262 SSTGASVILASILLKLATYGILRFILPLFPYASNYFLPLILTLAILSIIYSCISALSLID 321 Query: 311 IKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRD 370 IK ++AY+S++H ++ +++ GA I I+HG + GLFI+ G LY R T++ Sbjct: 322 IKSIVAYSSIAHKNVGMMGLFSNDINGITGAFIGSISHGFISGGLFIIIGMLYNRYGTKN 381 Query: 371 MRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLV 430 + GL M F ++ LG P T +F+GE ++ F + + P+IT+ T + Sbjct: 382 INYYRGLVLFMPTFTFFFFIFTLSNLGFPFTMSFIGENLLFFSTINISPLITIFITSVSI 441 Query: 431 FASVYSLAMLHRAYFGKAKSQIAS--QELPGMSLRELFMILLLVVLLVLLGFYPQPILDT 488 +Y + R +GK + + Q+L +++E+ ++L L++L + G +P + +T Sbjct: 442 LLPIYFIYFYQRISYGKLSPYLLTLYQDL---NIKEINLLLPLILLNTIFGLFPYMVFET 498 Query: 489 S 489 + Sbjct: 499 T 499 >UniRef50_Q6MDQ4 Putative NADH-ubiquinone oxidoreductase chain M n=2 Tax=Parachlamydiaceae RepID=Q6MDQ4_PARUW Length = 481 Score = 222 bits (566), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 146/431 (33%), Positives = 232/431 (53%), Gaps = 16/431 (3%) Query: 65 SEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWIL 124 S F W I+ L ID +SLL + LT ++ + + E F+ ++++ Sbjct: 54 SFFQYEWFALLSITFSLEIDSISLLFLYLTAIIIPIVFMNVNSEKLSNPKLFYGLILFLQ 113 Query: 125 GGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLV 184 G + G F+ D+ F FWE ML+P+YFL+ +WG G R AA KF +Y A + Sbjct: 114 GLLGGFFMTRDLVFFTIFWEAMLLPIYFLMNMWG-----GSKRHEAAIKFIVYMFAGSAL 168 Query: 185 MLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWL 244 M+ A+LAL F+ TF+ +L + L+ F +AFAVK P+ P H WL Sbjct: 169 MIAAVLALYFL------FGTFDLAQLSTQESTYPYVNLIAAAFLLAFAVKTPLFPFHAWL 222 Query: 245 PDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWM 304 PD + QA T+G++ L+G+L K YG++R L LFP+ ++P + L + G+ YGA Sbjct: 223 PDTYYQASTSGTILLSGLLSKAGIYGIIRIGLGLFPHVMKAWSPWLLGLAITGVLYGALA 282 Query: 305 AFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYE 364 A+ Q D KRL+AY+S SH+ F+LI ++ +A +GA++Q HG++ LF++ G L Sbjct: 283 AWRQNDFKRLLAYSSFSHVNFILIGLFIFDPIAQKGAILQAFNHGITITALFLVAGYLEN 342 Query: 365 RIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVI 424 R+ + GL M L L+ FF ++++ +PGT NFVGE +I G F P +T + Sbjct: 343 RLGFTIIGTSKGLARYMPNLCWLTFFFVLSSIALPGTNNFVGELLIFIGLFGKHPYLTAL 402 Query: 425 STFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQP 484 + +VF+ +Y L + + YF + S Q + ++ +E ++ L+ L + +G YP Sbjct: 403 TGLTIVFSVIYMLRWMQKMYF-EEPSPYQVQWI-DLTKKEFLIVAPLIFLNLWIGLYPMG 460 Query: 485 I---LDTSHSA 492 I LD HS Sbjct: 461 ILKYLDADHSK 471 >UniRef50_D2PVJ1 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PVJ1_9ACTO Length = 519 Score = 222 bits (565), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 172/462 (37%), Positives = 242/462 (52%), Gaps = 42/462 (9%) Query: 37 GLTLALSLQLW------------LQGGYSLTQSA------GIPQWQSEFDMPWIPRFGIS 78 GL LA S+ LW L+ G + SA G Q +E D+ WIP + Sbjct: 40 GLVLAGSVVLWVGYLRRPRGAGTLEAGVIDSDSADRGEVPGRLQSWAETDLTWIPALDVR 99 Query: 79 IHLAIDGLSLLMVVLTGLLGVLAVLCSWK---EIEKYQGFFHLNLMWILGGVIGVFLAID 135 HLA+D +SL +++L+ LL L L S + I + + L L+ I GVIG F A D Sbjct: 100 FHLAVDAISLPLILLSALLVFLCCLYSLRITPRIGRTRSLIAL-LLVIETGVIGTFAAAD 158 Query: 136 MFLFFFFWEMMLVPMYFLIALWG-HKASDGKTRITAATKFFIYTQASGLVMLIAILALVF 194 + LFF F+E++L+PM+ +I +WG H G+ R AAT F + T VML+ L + Sbjct: 159 LVLFFLFFEVVLIPMWLIIDVWGDHHDRAGRRR--AATTFVLMTVLGSAVMLVGFLLV-- 214 Query: 195 VHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFA--VKMPVVPLHGWLPDAHSQAP 252 Y G TF+ E L P++ G L IA VKMP+ PLH WLPDAH++AP Sbjct: 215 --YRQAG--TFDLELLGQDPVTGGHGAALAAAILIALGLAVKMPLWPLHIWLPDAHAKAP 270 Query: 253 TAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIK 312 T GSV LAG+LLK +YGL+R LP+ P+A+ AP + I G+ AQTD+K Sbjct: 271 TVGSVLLAGVLLKLGSYGLVRILLPVLPDATVTIAPYLAGFSTVAIVAGSLACLAQTDVK 330 Query: 313 RLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMR 372 RLIAY+SV HMGF+ + I T S GA+ IAHGL LF L G + +R T ++R Sbjct: 331 RLIAYSSVGHMGFIGLGIATLSPEGVAGALFANIAHGLITGLLFFLAGAIKDRHDTSELR 390 Query: 373 MMG-GLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP--------VITV 423 +G L++++ + L F +A+LG+PG F GE + L G+F+ V+ V Sbjct: 391 AIGRALYARLPRISVLLTFACLASLGLPGLAGFWGEMLALMGAFRPADGLPRTTYLVLMV 450 Query: 424 ISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLREL 465 I+ G V + Y L ++ G A+ +S EL Sbjct: 451 IAGLGTVLTAAYFLRLVRNLCQGDPAEYPATAFAVDLSRIEL 492 >UniRef50_D2SDG3 Proton-translocating NADH-quinone oxidoreductase, chain M n=8 Tax=Actinomycetales RepID=D2SDG3_9ACTO Length = 544 Score = 222 bits (565), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 148/400 (37%), Positives = 222/400 (55%), Gaps = 29/400 (7%) Query: 66 EFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILG 125 E D+ WIP H+ +DGLSL ++ LTG+L + + S +E ++ + F L +++ Sbjct: 66 EVDVRWIPTVDAGYHVGVDGLSLPLLALTGVLFLACAVWSPREEDRPRSFAAL-FLFLQT 124 Query: 126 GVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVM 185 +G F A+D+ LFF F+++ +V MYF+IA WGH G R +A KFF+YT L + Sbjct: 125 ACLGTFAALDLILFFVFFDLTIVGMYFIIAGWGH----GNAR-RSALKFFLYTFVGSLAL 179 Query: 186 LIAILALVFVHYNAT--GVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGW 243 L+ + L T V L ++P++ G L++L + AVK P+ P H W Sbjct: 180 LVGFIGLFLGGEERTFDMVALAQDPPLADSPVAGG---LVLLAIGLGLAVKTPLFPFHTW 236 Query: 244 LPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAW 303 LPDAH+ AP GS LAG+LLK YG +R ++P+ P A +A + + LGV+ + +GA+ Sbjct: 237 LPDAHTDAPAPGSAILAGVLLKLGTYGFVRIAMPILPEAWQRWAMVIVVLGVVSVLWGAF 296 Query: 304 MAFAQTDIKRLIAYTSVSHMGFVLI----------AIYTGSQLAYQGAVIQMIAHGLSAA 353 +A AQTD+KR+IAYTSV+HMG+VL+ A +A GAV QM++HGL Sbjct: 297 VALAQTDVKRMIAYTSVNHMGYVLLGLGAAGLVASADQGARTVATVGAVYQMVSHGLLTG 356 Query: 354 GLFILCGQLYERIHTRDMRMMGGLWSKM-KWLPALSLFFAVA---TLGMPGTGNFVGEFM 409 LF+L G L+ R T D G WS + + P + AVA +LG+PG F+ EF Sbjct: 357 ALFLLSGVLWSRGRTYD----SGRWSGLARPAPVFAASLAVAAFGSLGLPGLSGFIAEFQ 412 Query: 410 ILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAK 449 + G+ PV TV++ G++ + L L R G + Sbjct: 413 VFAGALPAAPVATVLAVVGILVTAGLFLVALQRLLTGPLR 452 >UniRef50_B9XHI7 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=bacterium Ellin514 RepID=B9XHI7_9BACT Length = 514 Score = 221 bits (563), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 155/494 (31%), Positives = 263/494 (53%), Gaps = 39/494 (7%) Query: 6 LILIPFIGGF-LCW--QTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 +IL P I LC+ + RF V R +A++ +T+ L+++++ Q ++ +G Sbjct: 7 IILCPLIAALVLCFVPRNYRF---VMRIVAMVATFVTMILAIKMFWQYDNAVIGESG--T 61 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMW 122 ++ E +PW+ G++ H+ +DG+++ ++++ ++ A SW +I F++ L+ Sbjct: 62 YKFEQLIPWVKSLGLNYHVGVDGINVGLILMGAIVAFAAACVSW-DINSRDKEFYILLLV 120 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 + GG++G F ++D+F+F+FF E+ LVP + +I +WG G+ + A + +Y Sbjct: 121 MTGGILGAFASLDIFMFYFFHELALVPTFIMIGVWGR----GENKNYATFQITLYLSIGA 176 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELL----NTPMSSGVEYLLMLGFFIAFAVKMPVV 238 L+ L+ ++AL Y +G TF+ L + P+S + + F + + + Sbjct: 177 LISLVGLIAL----YVKSGANTFDIVALTTYVKDHPISLHDQNFIFPLLLFGFGILISLW 232 Query: 239 PLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 P H W P + APTA ++ AG+L K YGL+R +LPL P A+ + + WL + I Sbjct: 233 PFHTWAPLGYGSAPTATAMLHAGVLKKFGLYGLIRIALPLLPQATHSWINVIAWLCLGNI 292 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFIL 358 FY +A Q + LI Y+SV+HMGFV + I + + + GAV+ MIAHG AA F L Sbjct: 293 FYCGLVAMRQKNFNWLIGYSSVAHMGFVFLGIASLNLIGITGAVLVMIAHGFLAALSFGL 352 Query: 359 CGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVV 418 G LY T +M MGGL K+ +L + A G+PG NF GE I FG+++ Sbjct: 353 SGYLYHITGTLEMDKMGGLLRKLPFLGTALMMALFAGCGLPGFANFAGEVTIFFGAYKTY 412 Query: 419 PVITVISTFGL-VFASVYSL----AMLH----RAYFGKAKSQIASQELPGMSLRELFMIL 469 P+IT I+ +G V +VY L MLH + G A+S +++P L Sbjct: 413 PLITGIAVWGASVIGAVYMLRAIRNMLHGVVPEKFMGVAESAFPHRKVP---------YL 463 Query: 470 LLVVLLVLLGFYPQ 483 +L+V L++ GF+P+ Sbjct: 464 ILLVSLLVFGFFPR 477 >UniRef50_Q0FXW0 NADH dehydrogenase subunit 4 n=3 Tax=Alphaproteobacteria RepID=Q0FXW0_9RHIZ Length = 500 Score = 221 bits (563), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 168/464 (36%), Positives = 249/464 (53%), Gaps = 34/464 (7%) Query: 7 ILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSE 66 ILIP + + + R +AL L+ + +W+ G+ A P +QS Sbjct: 6 ILIPLLASLGLFGWSNVTKEKARLVALGASTLSFLCLIIVWI--GFDTGSEA--PAFQSV 61 Query: 67 FDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCS--WKEIEKYQGFFHLNLMWIL 124 ++ WI G++ + +DG+SL + +++GLL LCS W K + + L Sbjct: 62 AEVGWIDALGVAWRVGVDGMSLAVSLMSGLL----FLCSIAWPAETKGRARQYYGWFLFL 117 Query: 125 GGV-IGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGL 183 GV +G+FL++D+ +F+ F+++ LV MYFLI WGH ++ AA KFF+YT A L Sbjct: 118 QGVSLGLFLSLDLLVFYVFFDLTLVGMYFLIGRWGHDQAE-----YAALKFFVYTLAGSL 172 Query: 184 VMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVE---YLLMLGFFIAFAVKMPVVPL 240 +L+AIL LV A G TF+ EL+ G + L++ GF + FA+K P+VP Sbjct: 173 AILLAILGLVL----ANGTLTFDIRELIAVQPLGGTDLRSSLILFGFLVGFAIKTPLVPF 228 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFA-PIAMWLGVIGIF 299 H WLP AH +AP S LAG+LLK YG++R + A +A P+A+ + ++ I Sbjct: 229 HTWLPLAHVEAPGPASAVLAGVLLKMGTYGMVRIPFQMMRETFAAYAFPLAI-VALVAIL 287 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYT-----GSQ----LAYQGAVIQMIAHGL 350 +G+ +A AQT++KR IAYTSV+HMG+ ++ I GS+ LA GAV +M+AHGL Sbjct: 288 WGSLVALAQTNLKRRIAYTSVNHMGYTVLGIAAAGAMIGSESVRTLALSGAVTEMVAHGL 347 Query: 351 SAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMI 410 LF++ G Y R T D+ GGL L A A+ G+PG FV EF I Sbjct: 348 ITGALFLIAGSFYTRAGTYDLSRFGGLARLTPLLMVAYFLAAFASFGLPGLAGFVAEFQI 407 Query: 411 LFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIAS 454 GSF V P++ I GLV + L M +FG+ K +IA+ Sbjct: 408 FAGSFGVYPIVAAIGLLGLVITAALFLMMGQTIFFGETKPEIAA 451 >UniRef50_C1F222 NADH dehydrogenase I, M subunit n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F222_ACIC5 Length = 525 Score = 221 bits (563), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 178/502 (35%), Positives = 268/502 (53%), Gaps = 37/502 (7%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALIT--MGLTLALSLQLWLQGGYSLTQSAGI 60 L W I F+G T + + RW+AL+T +G L L L Q G L + Sbjct: 16 LAWTIYASFLGAAAVLLTPQSRPQFTRWVALLTSLVGFVLTLGAVLQYQPGSLLVVA--- 72 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 D WIP+ GI LA DG+SL +++LTGL + +L SW + + FF L Sbjct: 73 -------DSTWIPQLGIRYTLAADGISLTLLLLTGLAAMAGILFSWNIEHRTREFFAFYL 125 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKAS-DGKTRITAATKFFIYTQ 179 + ++GGV GVFL+ D+FL F F+E+ ++P YFLIA+WG + D + R AA K +Y+ Sbjct: 126 V-LIGGVYGVFLSFDLFLLFVFYEIAIIPKYFLIAIWGSAPNGDTRPRQYAAMKLALYSF 184 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 A ++LI ILA + A+G T N L + P S + F+ FAV + P Sbjct: 185 AGSALVLIGILA----AWAASGSQTLNLAVLAHYPFSQHFQMWAFPLVFVGFAVLAGLWP 240 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFA----PIAMW--- 292 H W P H+ APTA S+ LAG+++K AYG LR ++ LFP A + + W Sbjct: 241 FHTWAPTGHAAAPTAASMLLAGVVMKLGAYGCLRVAMMLFPLGLAPWGFHILGLGSWRDV 300 Query: 293 ---LGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHG 349 L +I I YGA +A Q D K +I Y+SVSHMGFVL+ + T SQ+ GAV+QM +HG Sbjct: 301 FALLALISIVYGASVALVQRDFKFVIGYSSVSHMGFVLLGLMTLSQIGIDGAVLQMFSHG 360 Query: 350 LSAAGLFILCGQL-YERIHTRDMRMMGGLWSKMKWLPALSLFF---AVATLGMPGTGNFV 405 + A LF + G++ Y+R HTRD+ +G + + LP ++ F A+A++G+PG F+ Sbjct: 361 IIAGLLFAVVGRMVYDRTHTRDLAALGPM-HLSRALPFAAITFTLAAMASVGLPGFSGFI 419 Query: 406 GEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIA----SQELPGMS 461 E ++ G ++ +P + G++ ++ L R +F A+S LP ++ Sbjct: 420 AELQVILGVWRSMPWMVFAVALGILIGVAFTWRALTRVFFPAAQSDEPPAPIEHPLPPIT 479 Query: 462 LRELFMILLLVVLLVLLGFYPQ 483 L E LLL+ +++G YP Sbjct: 480 LPERAGALLLLTATIIVGLYPH 501 >UniRef50_UPI0001C30612 NADH dehydrogenase subunit 4 n=1 Tax=Phaeoceros laevis RepID=UPI0001C30612 Length = 487 Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 142/437 (32%), Positives = 235/437 (53%), Gaps = 19/437 (4%) Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 ++Q + W P I++++ IDG+ L VLT L + + W I+ Y+ + + + Sbjct: 65 KFQFVESIRWPPYSNINLYIGIDGIFLSSAVLTTFLIPIRISVGWSSIKSYKKEYMIAFL 124 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 +I V D LF F+E + + M+ + +I AA + F+YT + Sbjct: 125 IRESLMIAVSRMSDFLLFHVFFESVSISMF------------RQRKIQAAYQSFLYTLSG 172 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 + ML+AI ++ F TG T + LL T S + LL + FF +FAVK+P+VP+H Sbjct: 173 FVFMLLAISSISF----QTG--TTDLRILLTTESSEWRQVLLRIAFFASFAVKVPMVPVH 226 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 LP+A+ +APTAGSV AGIL K YG LRFS+ +FP + F L VI I Y Sbjct: 227 IRLPEAYVEAPTAGSVISAGILSKLGTYGSLRFSILMFPEVTFFFISFICTLSVIAIIYT 286 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 Q D+K++IAY SV+HM FV I +++ + +G++ M++HGL + G Sbjct: 287 PLTTVRQIDLKKMIAYFSVAHMNFVTIGMFSLNIQGIEGSISPMLSHGLVLLAPPLCVGA 346 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 LY+R TR ++ GGL S M +SLFF +A + + G+ +F+GEF+IL G+F+ ++ Sbjct: 347 LYDRHKTRLVKYYGGLVSTMSIFCTISLFFTLANMSLLGSSSFIGEFLILIGAFERNSLV 406 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 + G++ + Y L + + FG K ++ ++ RE+F+ LL +V ++ +G Y Sbjct: 407 ATPAALGMILGAAYFLWLYNCVVFGNFKPNFL-KKFSDLNRREVFISLLFIVGVIWMGVY 465 Query: 482 PQPILDTSHSAIGNIQQ 498 + L+ ++ + N+ Q Sbjct: 466 LEVFLECMYTCVSNLVQ 482 >UniRef50_B9W1R4 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Glomus intraradices RepID=B9W1R4_GLOIN Length = 499 Score = 215 bits (547), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 159/504 (31%), Positives = 268/504 (53%), Gaps = 33/504 (6%) Query: 2 LLPWLILIPFIGGF---LCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSA 58 +L L+LIP IG L ER R +AL+ ALSL LW + + + Sbjct: 1 MLTVLLLIPLIGVIGIILGCSNERQS----RQVALLVSLANFALSLVLWGEYDGNCSHFQ 56 Query: 59 GIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQG---- 114 + W S +I + +DG+SL V+LT + +L + G Sbjct: 57 FVQDWSSVTFCHFI--------IGLDGISLFFVLLTTFIIPTCILGTPNLTSNQSGNISA 108 Query: 115 --FFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAAT 172 F ++L+ I +I +F+ +D+ LF+ +E +L+P++ +I +W H + ++ A+ Sbjct: 109 VKSFLISLLVIETLLIALFVVLDLLLFYICFESVLIPLFLMIGIWSHS----QHKVRASF 164 Query: 173 KFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFA 232 F+YT L ML++ +AL Y + G + +Y+ + + + ++ +L LG F+A A Sbjct: 165 MLFLYTLFGSLFMLLSFIAL----YMSIG--STDYQLIATSCIQPEIQKILWLGIFLALA 218 Query: 233 VKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMW 292 +K P+VP H WLP AH++AP AGS+ LAG++LK A YG LR LPLFP AS+ + P+ Sbjct: 219 IKTPLVPFHIWLPLAHTEAPLAGSMLLAGVILKMATYGYLRILLPLFPEASSYYTPLVYT 278 Query: 293 LGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSA 352 L I I Y + Q ++K +IAY S+SHM + +++ + +G+++ +AHGL++ Sbjct: 279 LCTISIIYTSLSTLRQINLKSIIAYASISHMAIATMGVFSNNVQGIEGSILLSVAHGLAS 338 Query: 353 AGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILF 412 LFI G LY+R HT + GL S M L F +A + +P T NF+GEF+ Sbjct: 339 PALFISVGVLYDRWHTLILPYYRGLTSTMPLFSLLFFIFCLANMAVPLTANFLGEFLSFA 398 Query: 413 GSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLV 472 G++Q P IT++++ +V + Y++ +R G + +S RE F++L + Sbjct: 399 GAYQRNPFITILASSSVVLTAAYTIWTYNRVCLGSPSRYL--YPCLDISRREFFLLLPFL 456 Query: 473 VLLVLLGFYPQPILDTSHSAIGNI 496 +L+ +LG P ILD+ H ++ ++ Sbjct: 457 LLIFVLGIVPFVILDSLHFSVSSL 480 >UniRef50_C9MQ80 NADH dehydrogenase, M subunit n=18 Tax=Bacteroidales RepID=C9MQ80_9BACT Length = 503 Score = 214 bits (545), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 148/438 (33%), Positives = 228/438 (52%), Gaps = 26/438 (5%) Query: 71 WIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGV 130 W I+ + +DG+S++M++L+ ++ SW ++E + + L + + GV G Sbjct: 70 WFKPMHIAFSVGVDGISVVMILLSAIIVFTGTFASW-QLEPMKKEYFLWFVLLASGVFGF 128 Query: 131 FLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAIL 190 F++ DMF F F+E+ L+PMY LI +WG + +A K + ++++ IL Sbjct: 129 FISTDMFTMFMFYEVALIPMYLLIGVWGTGPKE-----YSAMKLTLMLMGGSALLILGIL 183 Query: 191 ALVFVHYNATGVWTFNYEELLNT-PMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHS 249 + Y +G T + EL M ++ + FI F V + P H W PD H+ Sbjct: 184 GI----YYFSGATTMDVIELARMHAMPKNIQNIFFPFVFIGFGVLGALFPFHTWSPDGHA 239 Query: 250 QAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQT 309 APTA S+ AG+L+K YG LR ++ L P+A +API + L I + YGA A QT Sbjct: 240 SAPTAVSMLHAGVLMKLGGYGCLRIAMFLMPDALQTWAPIFLVLTTISVVYGALSACVQT 299 Query: 310 DIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTR 369 D+K + AY+SVSH G VL A+ +Q A GA++QM++HGL A F G +Y R TR Sbjct: 300 DLKYINAYSSVSHCGMVLFALVMTTQTAITGAILQMLSHGLMTALFFACIGMIYHRAGTR 359 Query: 370 DMRMMGGLWSKMKWLPALSLFFAV---ATLGMPGTGNFVGEFMILFGSFQVV----PVIT 422 D+R +GGL MK +P L++ + V A LG+PG FV E I GSF+ V T Sbjct: 360 DVRYLGGL---MKVIPFLAVSYVVAGLANLGLPGFSGFVAEMTIFVGSFENAGTFHRVAT 416 Query: 423 VISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLG--- 479 +I+ +V +VY L ++ + F K ++ EL + E F I L+ + LG Sbjct: 417 IIACTAIVITAVYILRVVGKILFQKIPNK-KFYELHDATWDERFAIGCLIFCVAGLGLCP 475 Query: 480 -FYPQPILDTSHSAIGNI 496 F+ I+D H +I Sbjct: 476 LFFENMIIDAVHPIFDHI 493 >UniRef50_B7HY49 NADH dehydrogenase (Ubiquinone), M subunit n=71 Tax=Bacillus cereus group RepID=B7HY49_BACC7 Length = 500 Score = 213 bits (542), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 166/460 (36%), Positives = 253/460 (55%), Gaps = 28/460 (6%) Query: 40 LALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPR--FGISIHLAIDGLSLLMVVLTGLL 97 +A+ L G SL+ +W D + + F I L IDGLSL+M+VLT LL Sbjct: 45 MAIVLACTYASGKSLSLFDEKVKWIKFGDFAAVDKRWFSIYYELGIDGLSLVMMVLTALL 104 Query: 98 GVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALW 157 +LA + ++ + F+ L LM +G ++GVF A ++ LFF F+E+ L PM+ LI W Sbjct: 105 AMLAAIAAFTIKRNLKAFYMLLLMLEIG-MLGVFAAQNLMLFFIFFEITLPPMFLLIGKW 163 Query: 158 GHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSS 217 G +S+ AA + IY ++LI + +++F T + +E+L + + Sbjct: 164 GKLSSE-----KAAYSYLIYNGIGSAILLI-VFSVLFAKTGTTNIT--ELKEILTSVGAG 215 Query: 218 G-------VEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYG 270 G +++ L L IAFA+K+PV PLH W+ + H +A A + AG+LLK AYG Sbjct: 216 GGMAVPNSLQFGLFLSIMIAFAIKLPVFPLHRWMVNVHIEAHPAVVMLHAGVLLKIGAYG 275 Query: 271 LLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAI 330 ++RF LFP EFA + LGVI + YGA++A QTD ++++AY+S+SHMG VL+ + Sbjct: 276 IIRFGQGLFPEYFREFATLIAILGVINLLYGAFLALIQTDFRKVLAYSSISHMGIVLMGL 335 Query: 331 YTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLF 390 + QGA+ Q+++HGL AA LF L G + +R T ++ +GGL K +P LS F Sbjct: 336 AALNAPGTQGALFQVVSHGLIAALLFFLLGVIEQRFGTSNITALGGL---AKSVPVLSGF 392 Query: 391 F---AVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGK 447 F +A+LG+PG FV EF+ G FQ PVI G++ +VY L + FGK Sbjct: 393 FLAGGMASLGLPGMSGFVSEFLAFLGLFQAEPVIAAAGVLGIILTAVYVLRATLQVTFGK 452 Query: 448 AKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILD 487 K A ++ G E ILLL+ ++ +G P+ + D Sbjct: 453 -KEWEAKADIHGW---EYVPILLLIFCIIAIGVMPEILGD 488 >UniRef50_C7FEW5 NADH-ubiquinone oxidoreductase chain 4 n=2 Tax=Saccharomycetales RepID=C7FEW5_BRECS Length = 482 Score = 213 bits (541), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 135/413 (32%), Positives = 227/413 (54%), Gaps = 20/413 (4%) Query: 77 ISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM--WILGGVIGVFLAI 134 ++I DG+ L+ ++LT LG+++++ +W+ I + + + LM IL G+ F+ + Sbjct: 69 LNIDFGYDGIGLVFIILTIYLGIISIISNWENIVSKKETYMILLMSLIILMGL--NFICL 126 Query: 135 DMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVF 194 D+ F+ +E L+P+Y +I ++G G + AA IYT S L ML+AI +++ Sbjct: 127 DLISFYILFESTLIPLYLMIGIYG-----GSNKNKAAYYVLIYTLCSSLFMLLAI-VMIY 180 Query: 195 VHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTA 254 V YN T N + +S ++ +L++G I VK P+VP+H WLP HS++P Sbjct: 181 VLYNNVDFVTIN-----SKIISMELQSVLLIGLMIGLGVKTPLVPIHTWLPTVHSESPLG 235 Query: 255 GSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRL 314 GS+ LAGI+LK A YG++R L S +API +G+I I Y + + +QTD+K + Sbjct: 236 GSILLAGIILKLAIYGIIRILLSNISEISLLYAPILYVIGIITIIYSSLVTLSQTDLKVI 295 Query: 315 IAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC-GQLYERIHTRDMRM 373 IAY+S+SH+G ++ I++ + L G++I +AHG + LFIL G LY+R H R + Sbjct: 296 IAYSSISHLGVCILGIFSNNLLGIVGSLILCLAHGFVSPALFILMGGVLYDRYHNRVLFY 355 Query: 374 MGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFAS 433 GL M +FF+ G P + NFVGEF+ + G+ P+I + ++ ++ Sbjct: 356 YQGLTQFMPIFAVYLVFFSFCNTGTPLSYNFVGEFLCISGAIIKHPIIGAFTAASVILSA 415 Query: 434 VYSLAMLHRAYFGK-AKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPI 485 Y + ++ G +K + +L RE F++L L + ++LG P I Sbjct: 416 CYQFKLTNKLTSGAFSKYLHVTYDLL---YREHFILLFLAIPTLILGIAPNVI 465 >UniRef50_D1A432 Proton-translocating NADH-quinone oxidoreductase, chain M n=7 Tax=cellular organisms RepID=D1A432_THECD Length = 496 Score = 213 bits (541), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 166/451 (36%), Positives = 245/451 (54%), Gaps = 35/451 (7%) Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 + Q EFD W P + HL +DG+SL +V+LT LL L ++ + + + G L + Sbjct: 55 RMQLEFDRAWAPAIDLRFHLGVDGVSLPLVLLTALLTFLCLVYTLRHPPQ-GGSARLLIA 113 Query: 122 WILG---GVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 +L G++G F+A+D+ LFF F+E++L+PMY +IALWG G R AA KF +YT Sbjct: 114 SVLVLEVGMLGTFVALDLLLFFVFFEVVLIPMYLVIALWG-----GAGRRAAAWKFILYT 168 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFF----IAFAVK 234 + L L + T T + L P G+ + F + A+K Sbjct: 169 LLG------SGLLLAGLLVVGTNAGTLDMTALAEAP-GQGLTRTAQITAFALIGLGLAIK 221 Query: 235 MPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLG 294 +P+ PLH WLPDAH++APT GSV LAG+LLK YGL+R +LP P + +AP WLG Sbjct: 222 VPMWPLHTWLPDAHTEAPTIGSVLLAGVLLKMGTYGLVRIALPAAPEGAVVWAP---WLG 278 Query: 295 ---VIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLS 351 VIGI YGA AQ D+KRLIAY+S+ HMGFVL+ I T + + A++ IAHGL Sbjct: 279 LMAVIGIVYGALACLAQRDLKRLIAYSSIGHMGFVLLGIATLTPVGVNAALLGNIAHGLI 338 Query: 352 AAGLFILCGQLYERIHTRDMRMM-GGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMI 410 LF L G + +R T ++ + GG+ +K L + F +VA+LG+PG F GE + Sbjct: 339 TGLLFFLAGGVKDRYGTGELDSLGGGMLTKAPLLASFLTFASVASLGLPGLAGFWGEMLA 398 Query: 411 LFGSF---QVVPVIT-----VISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSL 462 L G++ + +P T + G V + Y L +L + G LPG++L Sbjct: 399 LLGAYRPAEALPRETFVTFMAVGALGAVLTAAYFLRLLAKITHGPVAEHRRRDALPGLTL 458 Query: 463 RELFMILLLVVLLVLLGFYPQPILDTSHSAI 493 E + LV L +L+G +P+ +LD + + + Sbjct: 459 AEYAAWVPLVALTLLVGLWPKLLLDLTTAPV 489 >UniRef50_A7H5R9 NADH-quinone oxidoreductase, M subunit n=15 Tax=Campylobacter RepID=A7H5R9_CAMJD Length = 495 Score = 212 bits (540), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 129/376 (34%), Positives = 213/376 (56%), Gaps = 20/376 (5%) Query: 126 GVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVM 185 ++G+F A D LF+ FWE L+P+ +++ ++G +G KFFIY A ++M Sbjct: 109 AIMGLFSAKDGLLFYVFWEFSLLPLLYIMGVYGKDFREG-------VKFFIYAFAGSILM 161 Query: 186 LIAILALVFVHYNATGVWTFNYEE-LLNTPMSSGVEYLLMLG-FFIAFAVKMPVVPLHGW 243 L+A++ +++Y ++TF+ E NT + E LL+ G FFIAFA+K P+ PLH W Sbjct: 162 LVALIYQAYLNYQLLNIFTFDLEIWKNNTSAVNFTEQLLLFGAFFIAFAIKAPLFPLHTW 221 Query: 244 LPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAW 303 P ++ +P SV L ++ K A +G L F LPLFP+AS F P+ + L ++ I Y A Sbjct: 222 APKVYANSPVLVSVML--VVFKMAPFGFLLFCLPLFPDASVYFMPLIVALCIVSIVYNAL 279 Query: 304 MAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLY 363 +A+ +IK LIAY+S+SH+G +++ I++ + L GAV M AHG+ LF++ LY Sbjct: 280 IAYKAENIKELIAYSSISHLGVMILGIFSLNALGISGAVFYMFAHGIVTGALFLMVELLY 339 Query: 364 ERIHTRDMRMMGGLWSKMKWLPALSLFFA---VATLGMPGTGNFVGEFMILFGSFQVVPV 420 +R HT D+ L K P S+FF +A++ +P T +FVGEF+IL G ++ Sbjct: 340 QRYHTYDISFYHSLAKKA---PLFSIFFMLILLASVSLPLTVSFVGEFLILLGIAKINLF 396 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 +++ ++ ++Y A+ + F + +S I S L LRE+ ++ +VV++ LG Sbjct: 397 YALLAGLVIILGAIYIFAVFRKISFMQKQSFIESFSL---RLREIVALVCIVVMIFGLGL 453 Query: 481 YPQPILDTSHSAIGNI 496 P +L + N+ Sbjct: 454 MPNILLKPIQKDVDNL 469 >UniRef50_A9B486 Proton-translocating NADH-quinone oxidoreductase, chain M n=4 Tax=Chloroflexi (class) RepID=A9B486_HERA2 Length = 565 Score = 211 bits (537), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 168/524 (32%), Positives = 264/524 (50%), Gaps = 73/524 (13%) Query: 40 LALSLQLWLQGGYS--LTQSAGIPQWQSEFD-MPWIPRFGISIHLAIDGLSLLMVVLTGL 96 L L+L LWL GG++ L AG + D + W+P F + +DGL+ +V LT Sbjct: 53 LGLTLFLWLSGGFNPALASVAGDQAMIQQVDRVRWVPFFNADYFVGLDGLNFPLVFLTTA 112 Query: 97 LGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIAL 156 L + +L +++ I+ Q + ++ + ++G F++++ L F FWE LVPM+F+I Sbjct: 113 LTPVCILAAFR-IKHRQNVYLALMLLLESAMLGYFVSLNFLLLFLFWEFSLVPMFFIINN 171 Query: 157 WGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWT------------ 204 WG G+ R AA KFF+YT A + ML L F+ Y ATG + Sbjct: 172 WG-----GENRRYAAFKFFVYTMAGSVAML---LIFEFI-YLATGTFDLVVLSRLGQGLP 222 Query: 205 -------------FNYEELLNTPMSSGVEYL---LMLG-------------FFIAFAVKM 235 + L + + S VE + +LG F+AFAVK+ Sbjct: 223 VDPALLAPKLGAGYTSGATLQSMLFSAVEDIGLTSILGTSNGTPAAIVFWSIFVAFAVKL 282 Query: 236 PVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGV 295 V PLH W PD + APT+GS+ ++ ++ K AYG++R + LFP + FAP L + Sbjct: 283 AVWPLHTWQPDTYENAPTSGSMIVSAVMSKMGAYGMIRIMIMLFPQQTKFFAPALAILAL 342 Query: 296 IGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQ---------------G 340 I +GA+ AQ ++KRLIAY S++HMG+VL+ + + A + G Sbjct: 343 ASILFGAYAGLAQINLKRLIAYASINHMGYVLLGLAAVASAAPESLGDLAVNIRASAMNG 402 Query: 341 AVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPG 400 QM+AHG S A LF L G+LYER T + GGL M + A LG+PG Sbjct: 403 VQAQMVAHGFSTAALFFLAGELYERTGTYQLDQFGGLRKVMPIFAGIMGVAMFANLGLPG 462 Query: 401 TGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGM 460 FVGEF I G++ PVIT I+ GL+ ++ + M + ++G ++ + LP + Sbjct: 463 LAGFVGEFFIFRGAWGTQPVITTIAVLGLIVTALVLIRMYQKIFYGPVNHKLTN--LPDI 520 Query: 461 SLRE--LFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVN 502 + + + L L+++L++ G +P+P++D S+ A + Q F N Sbjct: 521 KVGDWAFNVTLPLIIVLLVFGIFPKPLMDLSNYAATVMAQVFTN 564 >UniRef50_A6L163 NADH dehydrogenase I chain M n=18 Tax=Bacteroidetes RepID=A6L163_BACV8 Length = 493 Score = 211 bits (536), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 154/509 (30%), Positives = 252/509 (49%), Gaps = 26/509 (5%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGY-SLTQSAGI 60 +L + I++P + W + V + ++ +G ++ L+L ++L Y L Q+ Sbjct: 3 ILSFFIIVPLLMLASLWASR----SVNQVRGVMVVGSSILLALSVYLTIDYIELRQAGAT 58 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 + W I + +DG+S+ M++L+ ++ SWK + +F Sbjct: 59 GEMLFTASTVWYAPLHICYSVGVDGISVAMLLLSSIIVFTGTFASWKLQPLTKEYF---- 114 Query: 121 MW---ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIY 177 MW + GV G F++ D+F F F+E+ L+PMY LI +WG + AA K + Sbjct: 115 MWFTLLSVGVFGFFVSTDLFTMFMFYEVALIPMYLLIGVWGSGRKE-----YAAMKLTLM 169 Query: 178 TQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPV 237 +LI IL + Y A G T N E+ + ++ + F+ F V + Sbjct: 170 LMGGSAFLLIGILG---IFYGAGG-ETMNLLEIAKLHIPHEMQRIFFPLIFLGFGVLGAL 225 Query: 238 VPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 P H W PD H+ APTA S+ AG+L+K YG R ++ L P +A + + + L I Sbjct: 226 FPFHTWSPDGHASAPTAVSMLHAGVLMKLGGYGCFRVAMYLMPEGAAMWGDVFLILTTIS 285 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 + YGA+ A QTD+K + AY+SVSH G VL A+ ++ + GA++QM++HGL A F Sbjct: 286 VVYGAFSAVVQTDLKYINAYSSVSHCGLVLFALLMMTRTSCTGAILQMLSHGLMTALFFA 345 Query: 358 LCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV 417 L G +Y R HTRD+R+MGGL M +L + +A LG+PG FV E + GSFQ Sbjct: 346 LIGMIYGRTHTRDVRLMGGLMKIMPFLAVGYVIAGLANLGLPGLSGFVAEMTVFVGSFQN 405 Query: 418 VP----VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVV 473 V T+++T +V +VY L ++ + +GK + +L + E ++ L+ Sbjct: 406 DDTFHRVCTLVATTSIVITAVYILRVVGKILYGKVLNP-EHLKLTDATWDERVAVICLIA 464 Query: 474 LLVLLGFYPQPILDTSHSAIGNIQQWFVN 502 + LG P I D +++ I +N Sbjct: 465 CVAGLGMAPFWISDLISNSVEPIISQLLN 493 >UniRef50_B9KDW0 NADH-quinone oxidoreductase, M subunit n=1 Tax=Campylobacter lari RM2100 RepID=B9KDW0_CAMLR Length = 489 Score = 210 bits (535), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 141/429 (32%), Positives = 232/429 (54%), Gaps = 28/429 (6%) Query: 77 ISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDM 136 ++ H+ +D ++L +++L ++ L+ +C +I+ + L+ +IG+F ++D Sbjct: 61 VNFHIGVDAIALYLMLLCSIMIFLSFIC--LDIQDKSVVVSIFLLQF--CIIGLFASLDA 116 Query: 137 FLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVH 196 LF+ FWE L+P LI L G + + K A KFFIY ++ML+AI+ + F++ Sbjct: 117 LLFYVFWEFSLIP---LIYLMGRYSDNYK----AGIKFFIYAFCGSMLMLLAIIYVGFLY 169 Query: 197 YNATGVWTFN----YEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAP 252 Y + G W+F+ Y+ P S V+ L+ +GFFIAFA+K P+ P H W P ++++P Sbjct: 170 YQSFGYWSFDLLAWYKSDFFIPES--VQNLIFIGFFIAFAIKSPLFPFHTWAPKVYAKSP 227 Query: 253 TAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIK 312 T SV L K A +G LRF LPL P+ + + L ++GI Y A +AF D+K Sbjct: 228 TLVSVMLVS--FKMAPFGFLRFILPLTPDTLNHYYSLLAVLCIVGILYAALIAFKAKDLK 285 Query: 313 RLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMR 372 LIAY+S+SH+G V++ I T + G+V M AHG+ GLF+ LY+R HT D+ Sbjct: 286 ELIAYSSISHLGVVILGIVTFTYNGVSGSVFYMFAHGIVTGGLFLAAYMLYKRYHTFDLD 345 Query: 373 MMGGLWSKMKWLPALSLFFAV---ATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGL 429 L K P S FFAV +++ +P T +FVGEF+IL G V + + + Sbjct: 346 FYKNL---AKTAPLFSFFFAVLLFSSISLPLTISFVGEFLILQGIASVNLWYALFAGGVI 402 Query: 430 VFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTS 489 + ++Y L + +F ++ +I L E+F++ +L L++ LG P +LD Sbjct: 403 ILGAIYMLNIYRNMFFATSEEKIEKLVLKK---GEIFVLSILSALVIYLGIAPSAMLDEI 459 Query: 490 HSAIGNIQQ 498 + +I + Sbjct: 460 ALNVNSILE 468 >UniRef50_A3YZD4 NADH dehydrogenase subunit 4 n=1 Tax=Synechococcus sp. WH 5701 RepID=A3YZD4_9SYNE Length = 493 Score = 209 bits (532), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 158/474 (33%), Positives = 257/474 (54%), Gaps = 27/474 (5%) Query: 28 PRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLS 87 PR +AL+ GL L L +++ +Q S+ + W+P+ G+ HL DGLS Sbjct: 25 PRRLALVIPGLQLLLIVRMVIQPA-------------SDLRLVWLPQLGLDFHLGQDGLS 71 Query: 88 LLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMML 147 L +V LT LL ++AV + E+ + + FF L L LG + G LA + LF +E++L Sbjct: 72 LPLVGLTALLTLMAVAATSLELPRQRLFFALVLATNLG-LQGALLARNGLLFVIAFELIL 130 Query: 148 VPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNY 207 +P LIA+WGH+ S AA ++ IY SG+ +L +LAL ++ N ++ Y Sbjct: 131 IPTTLLIAIWGHERSR-----EAAIRYLIYGAVSGVSLLAGVLALGLLNANG---FSLAY 182 Query: 208 EELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTA 267 +E+ + G + ++ +AF +K+P VPLHGW P A+S++ + ++ LAG + K Sbjct: 183 DEMATAVLPQGSKVWILGLLILAFGLKLPAVPLHGWQPLAYSESSSPVAMLLAGAVSKLG 242 Query: 268 AYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVL 327 AYGLLRF + +AP+ G G YGA A AQTD++RL+AY+S+ HMG +L Sbjct: 243 AYGLLRFGVGFMGETWESWAPLIAVAGTAGAVYGALNAIAQTDMRRLVAYSSLGHMGLLL 302 Query: 328 IAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLP-A 386 +A+ + L+ QGAV Q++AHG+ ++ LF + G + + T ++ + GL + ++ LP Sbjct: 303 LAMAAATPLSLQGAVSQVLAHGVISSLLFCVVGLIEAKTGTTEIAELSGLLNPLRGLPFT 362 Query: 387 LSLF--FAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAY 444 L +F +A G+PG FV E ++ GS+ V P+ T+ F +VY++ + +R Sbjct: 363 LGMFLLALMAAAGLPGMVGFVAELVVFQGSWSVFPLPTLGCLFASGLTAVYAVRLFNRVG 422 Query: 445 FGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQ 498 FGK + A P + E L L + +++ G +P L S S + Q Sbjct: 423 FGKLDN--AKAFYPATTWPERLPALALSLFVLVGGLWPPLTLGWSESVTTPLAQ 474 >UniRef50_Q9ZJV5 NADH oxidoreductase I n=12 Tax=Helicobacter RepID=Q9ZJV5_HELPJ Length = 512 Score = 209 bits (531), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 154/439 (35%), Positives = 259/439 (58%), Gaps = 25/439 (5%) Query: 56 QSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF 115 Q+AG+ Q++ ++ + + G++ H+ +DG++L ++ LL + VL S +++ + Sbjct: 56 QTAGM-QFEEMKELAY--QIGVNYHVGVDGIALFLL----LLNAIVVLLSVIYVKERRKD 108 Query: 116 FHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFF 175 F + L+ + G ++GVF ++++ F+ FWE+ L+P+ +LI +G +I + KFF Sbjct: 109 FVICLLLLEGILMGVFSSLNVIFFYAFWEISLLPVLYLIGRFGRN-----NKIYSGMKFF 163 Query: 176 IYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKM 235 +YT + L ML+ IL + + + N G+ +F+ + SSG++ L + F I AVK+ Sbjct: 164 LYTFLASLCMLLGILYIGYDYANNYGMMSFDILDWYQLNFSSGIKTWLFVAFLIGIAVKI 223 Query: 236 PVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEF-APIAMWLG 294 P+ PLH WLP A+S APT GSV L+ +L K Y LLRF LPLFP S + PIA+ + Sbjct: 224 PLFPLHTWLPYAYSNAPTLGSVMLSALLSKMGTYALLRFLLPLFPELSEIYLTPIAI-VA 282 Query: 295 VIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAG 354 + I YG ++A+AQ D+K LIAY+S SHMG V++ +++ + GAV M AHG+ G Sbjct: 283 LCMIIYGGFLAYAQKDLKTLIAYSSFSHMGVVVLGVFSFNVEGVSGAVFMMFAHGVIVMG 342 Query: 355 LFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAV---ATLGMPGTGNFVGEFMIL 411 LF+L G L ER + ++ G S K P + FF + A +GMP + FVGEF+ L Sbjct: 343 LFLLAGILEERASSLEIARFG---SIAKSAPVFAAFFMIVLMANVGMPLSIGFVGEFLSL 399 Query: 412 FGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAK---SQIASQELPGMSLRELFMI 468 G F P++ +I+ ++ ++VY L +FG K +QI+ E ++ RE+ ++ Sbjct: 400 LGFFATYPLLAIIAGTSIILSAVYMLTSYKDVFFGNLKTGNNQISVFE--DLNAREVGVL 457 Query: 469 LLLVVLLVLLGFYPQPILD 487 +++ L+++LG YP+ +L Sbjct: 458 SVILALILILGIYPKALLK 476 >UniRef50_C1F221 NADH dehydrogenase I, M subunit n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F221_ACIC5 Length = 543 Score = 208 bits (530), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 163/527 (30%), Positives = 263/527 (49%), Gaps = 50/527 (9%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L WL +PF G F R + R +A++ +L +L LW+ + S+G+ Sbjct: 7 LTWLTALPFAGAFAVLALSR-NRALARALAILIAVASLLGTLALWVHFNAA---SSGM-- 60 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMW 122 Q E W G++ H+ IDGL LL++VL+ ++ +++++ SW +F L +++ Sbjct: 61 -QFEQQYAWASSIGLTYHVGIDGLGLLLLVLSAIVVLMSLIASWSNPAHGPVYFAL-VLF 118 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 + G+ G F A++ +F +WE+ L+P +FL+ WG G R A+ +FF+YT Sbjct: 119 LECGLFGTFTALNFLHWFLYWELTLIPAFFLVRQWG-----GAKRAQASLQFFLYTMVGS 173 Query: 183 LVMLIAILALVFVHYNATGVWTF------NYEELLNTPMS----------SGVEYLLMLG 226 + +L+A LAL Y A G + F ++ L + S + LL Sbjct: 174 VALLVAFLAL----YLAAGTFDFLALAQWAHQGQLTAALQQQFAWTGWSGSSLALLLFWA 229 Query: 227 FFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEF 286 F+ FAVK PVVP H WLP +++A + ++ L G + K YG LR LP+FP + Sbjct: 230 VFLGFAVKTPVVPFHTWLPATYAEASSETTMLLTGAMSKMGVYGFLRILLPIFPEQMQQM 289 Query: 287 APIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAI-----YTGSQ------ 335 +WL + I A A+AQ D+KR AY+SV+H+G+ ++ I +TG+ Sbjct: 290 LTPLLWLALASIVLPALAAWAQRDLKRTFAYSSVNHLGYCVLGICVVARFTGADPSLLLE 349 Query: 336 --LAYQGAVIQMIAHGLSAAGLFILCGQLYERIH-TRDMRMMGGLWSKMKWLPALSLFFA 392 A G ++Q+ +HGL+AA LF L R R + GGL + L Sbjct: 350 KSAALTGVLLQIFSHGLTAAALFWFVALLERRNQGKRALTDFGGLRKIVPVFCGLMGIAI 409 Query: 393 VATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQI 452 A+LG+PG F GEF+I G F + ++ GL+F +V+ LA+L R +FG + Sbjct: 410 FASLGLPGLNGFPGEFLIFKGVFPLAGWAAALALLGLLFTAVFLLAVLQRVFFGPMRESQ 469 Query: 453 ASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQW 499 +P ++ E F ++ L+++LGFYPQ I + G + QW Sbjct: 470 QQAPMPDLTAAERFAFAPVIALMLVLGFYPQLI---AGKMTGTVAQW 513 >UniRef50_D1BBE0 NADH dehydrogenase subunit M n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BBE0_SANKS Length = 567 Score = 208 bits (529), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 185/553 (33%), Positives = 272/553 (49%), Gaps = 64/553 (11%) Query: 3 LPWLIL---IPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAG 59 +PWL L +P +G + W ++ R +AL G +L + + L T +A Sbjct: 7 IPWLTLLAVVPLVGAAVVWALPHGSRRLARPVAL---GFSLLEVVLVVLAVAAFDTSAAS 63 Query: 60 IPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKE----------- 108 Q WIP+ G S L +DG+ LL+V L+ L L + +W+E Sbjct: 64 THQLVETH--AWIPQIGASYALGVDGVGLLLVALSVGLVPLVIGAAWREQGVEDAVSTVS 121 Query: 109 ----------------------------IEKYQGFFHLNLMWILGGVIGVFL-----AID 135 + G L L V+ F+ A D Sbjct: 122 TVSTEGAAGAAGAAAPARGAGTAKSPAGADDRPGEGRLRHYLALVLVLQTFMVLVFSARD 181 Query: 136 MFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFV 195 +FLF+ +E MLVP+YF+I +G +G R AA KF I++ A GLVML A++ L +V Sbjct: 182 VFLFYVVFEAMLVPVYFMIGGFG----EGARRRYAAIKFLIFSLAGGLVMLAAVIVL-YV 236 Query: 196 HYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAG 255 G F E L + E LL LGFF+AFA+K P+ P+H WLPDA AP Sbjct: 237 Q-GPGGEQGFLTENLTGLGLDQTTERLLFLGFFLAFAIKAPMFPVHSWLPDAAEHAPAGT 295 Query: 256 SVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLI 315 SV L G+L K +G+L LPLFP+AS AP+ + L V+ I YGA +A Q D+ RL+ Sbjct: 296 SVLLVGVLDKVGTFGMLTLCLPLFPDASRWAAPVVIVLAVVSIIYGALLALGQDDLMRLV 355 Query: 316 AYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERI---HTRDMR 372 AYTSVSH G +++ I+ +QL+ GA M+ HG+S LF++ G + R +R + Sbjct: 356 AYTSVSHFGVIVLGIFAFTQLSVSGASFYMVNHGISTGLLFLVGGFVVRRTVSGRSRRIS 415 Query: 373 MMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFA 432 +GGL L + L ++ L +PG FV E M+ G+F PV ++S +V A Sbjct: 416 ELGGLAKVTPVLAGVFLLAGLSALSLPGLSTFVSEIMVFIGAFGRYPVAAIVSAVVVVLA 475 Query: 433 SVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILD-TSHS 491 ++Y L R + G + ++A E+ +S RE +++ LVV L++LGF P P LD Sbjct: 476 ALYVLLTYQRIFTGPVRPELA--EVRDLSARERWVVAPLVVALLVLGFVPGPALDLVGDP 533 Query: 492 AIGNIQQWFVNSV 504 A ++Q V V Sbjct: 534 AAVTLEQVGVTDV 546 >UniRef50_C7RLG5 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RLG5_9PROT Length = 499 Score = 207 bits (528), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 138/406 (33%), Positives = 215/406 (52%), Gaps = 11/406 (2%) Query: 55 TQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQ- 113 T AG P +Q WI G+ + +DG+SLL + T LL AV+ W+ Sbjct: 54 TFDAGNPDFQFLESATWITGLGVRYLVGVDGISLLFLPATALLFCGAVVAGWRVTAAASP 113 Query: 114 ---GFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITA 170 G + L+ + +GVF A+D LFFF WE L+P+YFL++LWG G R A Sbjct: 114 LSPGLYFALLLLLEAATLGVFCALDTILFFFCWEFTLLPLYFLVSLWG----VGNGRQAA 169 Query: 171 ATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIA 230 A ++F+ A G+ +L +LA VF GV F+ LL TP+ GV++++ L + Sbjct: 170 AVRYFLVMLAGGVPLLFGLLAAVFGQAKG-GVLAFDLPTLLATPLPEGVQFVVFLLLLVG 228 Query: 231 FAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIA 290 F VK+P+VP+H WLP AP A + L G LK AYGL+R ++PL P A+ + + Sbjct: 229 FGVKVPLVPVHTWLPSIAMGAPAAVTALLVG--LKLGAYGLIRLAIPLAPLAARDLHWLL 286 Query: 291 MWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGL 350 G + I YG A AQ++++ ++AY S+SH+G V++A+ + S A QGA++ M+ + Sbjct: 287 AGFGTLAILYGGVAALAQSNLRGVLAYASLSHVGLVVLALASFSVSALQGALLLMLNFSV 346 Query: 351 SAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMI 410 S G F++ L R + D+ +GG+ M L L F +A +G+PGT F E +I Sbjct: 347 STGGGFLILSFLQRRTGSTDIGHLGGVMRSMPLLSGFFLLFGLAGIGLPGTSGFPAELLI 406 Query: 411 LFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQE 456 + + + + FG V A+ LA +A+FG + ++ Sbjct: 407 IVAALHSHTGAGLAALFGTVLAAAAFLAPFRQAFFGPVHNSDVAEA 452 >UniRef50_D1BW17 Proton-translocating NADH-quinone oxidoreductase, chain M n=3 Tax=Actinomycetales RepID=D1BW17_XYLCX Length = 527 Score = 207 bits (526), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 171/500 (34%), Positives = 249/500 (49%), Gaps = 30/500 (6%) Query: 1 MLLPWLILI---PFIGGFLCWQTER---FGVKVPRWIALITMGLTLALSLQLWLQGGYSL 54 M PWL + P + T R G R +AL+ + LAL + G + Sbjct: 1 MSFPWLTALIAWPLVAALATATTGRGRTLGAGRARQVALVGSLVELALGV-----GAFLA 55 Query: 55 TQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQG 114 +A + Q WIP G S + +DG++LL+V L+ L L +L +WKE QG Sbjct: 56 FDTARAAEHQLLETHRWIPSIGASYAVGVDGVALLLVGLSVGLVPLVILAAWKE----QG 111 Query: 115 FFHLNLMWILGGV-------IGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTR 167 L L V + VF A D+FLF+ +E ML+P+YFLI +G G R Sbjct: 112 GDLARLRTYLATVLVLQSFMVAVFAARDVFLFYVLFEAMLIPVYFLIGGFGQ----GAQR 167 Query: 168 ITAATKFFIYTQASGLVMLIAILALVF-VHYNATGVWTFNYEELLNTPMSSGVEYLLMLG 226 AA KF +Y+ A GLVML+A++AL V G TF + L + + L+ G Sbjct: 168 RYAAVKFLLYSLAGGLVMLVAVIALYLQVPAAERGPQTFLVDNLSGLELGTTAGRLMFCG 227 Query: 227 FFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEF 286 FF+AFA+K P+VP+H WLPD A S L +L K +G+L LPLFP A+ Sbjct: 228 FFLAFAIKAPLVPVHSWLPDVAENATPGTSTLLISVLDKVGTFGMLTLCLPLFPEAARWA 287 Query: 287 APIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMI 346 AP + L V+ I YGA +A QTD+ RLI YTSVSH GF+++ I+T + GA M+ Sbjct: 288 APAVVVLAVVSILYGAILAIGQTDLLRLIGYTSVSHFGFIVLGIFTFTATGTAGASFMML 347 Query: 347 AHGLSAAGLFILCGQLYERIHTRDMRMM--GGLWSKMKWLPALSLFFAVATLGMPGTGNF 404 HG+S LF++ G + R R R+ GGL L L ++ +PG F Sbjct: 348 NHGISTGALFLVAGFVIARHPERSQRIADYGGLRIAAPILGGSFLVAGLSAAALPGLATF 407 Query: 405 VGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQ-ELPGMSLR 463 E ++ G+F V +++ +V A++Y L R + G + ++ +P + R Sbjct: 408 GSEILVFLGAFSAVQWAGIVAVPAVVLAAIYVLLTYQRIFTGTVPAGLSPDGRVPDLDGR 467 Query: 464 ELFMILLLVVLLVLLGFYPQ 483 E + +L+ LL+LLGF P Sbjct: 468 ERTVAGVLIALLLLLGFVPN 487 >UniRef50_A3THE8 Putative NADH dehydrogenase I chain M n=1 Tax=Janibacter sp. HTCC2649 RepID=A3THE8_9MICO Length = 497 Score = 205 bits (522), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 151/440 (34%), Positives = 223/440 (50%), Gaps = 19/440 (4%) Query: 68 DMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKE-------IEKYQGFFHLNL 120 D WIP G+ H +DG+S ++VLT ++GVL V SW E + L Sbjct: 55 DRAWIPDLGVRWHFEVDGISAPLIVLTAVIGVLVVAHSWAEQPWADSPSSGSAATYLGAL 114 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + + G + F A D LFF +E++LVPM+ LI+ +G S K R A+ +F +YT Sbjct: 115 LLVETGALAAFSARDAVLFFIAFEIVLVPMWVLISRYGDPHSAAK-RADASARFILYTAI 173 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 +ML+ IL LV A F +S G + L+ + + AVK+PV PL Sbjct: 174 GSTLMLVGILLLVTKARTAD----FAALPAAAASLSPGQQMLIAVLLTLGLAVKVPVFPL 229 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H WLP AH+ APTAGSV LA +LLK YGL+R L P+ AP+ GVIGI + Sbjct: 230 HTWLPAAHTTAPTAGSVLLAAVLLKLGTYGLVRLPLASVPDGFTRIAPVLAIAGVIGILW 289 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 G + + D+KRLIA++SV+HMGFV++ + +G++ Q A+I IAHG+ +A LF++ G Sbjct: 290 GGLICLVERDLKRLIAFSSVAHMGFVVLGLASGTETGLQAALIGNIAHGVISALLFVIVG 349 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVAT-LGMPGTGNFVGEFMILFGSFQVVP 419 L R + D+ ++ ++ L +A LG+PG F GEF L ++ + Sbjct: 350 GLKHRWGSVDLAVLRPALREVSPRLGFGLILGLAAGLGLPGLAGFWGEFTALIAAWNPIQ 409 Query: 420 VITVIST------FGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVV 473 V+ T G A+ YSL + + G + A P EL +I L V Sbjct: 410 HTGVLRTCAVIAAVGAALAAAYSLRVARIVWVGDEVAADAPDRAPDARGVELGVISALAV 469 Query: 474 LLVLLGFYPQPILDTSHSAI 493 +V LG P + + A+ Sbjct: 470 GVVALGVAPHLVFSVTSDAV 489 >UniRef50_Q1IZW1 NADH-quinone oxidoreductase, M subunit n=3 Tax=Deinococcus RepID=Q1IZW1_DEIGD Length = 474 Score = 203 bits (517), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 132/353 (37%), Positives = 201/353 (56%), Gaps = 11/353 (3%) Query: 67 FDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGG 126 F + W+P GI+ +A+ G+SL + ++T L+ +AVL + + + L L + G Sbjct: 51 FSVNWVPALGITYSVALTGVSLALALVTALMTFIAVLYAARRVSNPGTLLSLVLA-METG 109 Query: 127 VIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVML 186 +IG+F A D+ LF+ F+E L+P ++A++G G R+ A KF YT L+ML Sbjct: 110 LIGIFAARDLVLFYVFFEDALLPALLMLAIYG-----GPNRMRALVKFAAYTLFGSLLML 164 Query: 187 IAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPD 246 ++I+ V Y G TF +L+ P+ + L LGF A AVK+P+ PLH WLPD Sbjct: 165 LSIIG---VRYYG-GSPTFALVDLVQHPVQGVTQTWLYLGFLAAMAVKLPLWPLHAWLPD 220 Query: 247 AHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAF 306 H Q +G D+ G L K YGL +F LPLFP+AS E P+ M L Y AW+AF Sbjct: 221 FHEQNHASGVPDVMGTLYKVGGYGLFQFGLPLFPDASLELRPVLMGLAAFTALYAAWIAF 280 Query: 307 AQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERI 366 QT+ KRLIAY +SHMGFV + +++ ++ A GA+ + + LF+ G L ER+ Sbjct: 281 RQTNWKRLIAYAGLSHMGFVALGVFSLNETATIGAMYLLAFQNVYTGALFLAVGMLQERV 340 Query: 367 HTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP 419 + R +GG+ ++ L L+L +A++ +PG F+GEF +L G++QV P Sbjct: 341 GSVHTR-VGGVMTQAGALGGLTLTLWLASIAVPGLAGFIGEFSVLLGAYQVQP 392 >UniRef50_D1PWI6 Proton-translocating NADH-quinone oxidoreductase n=6 Tax=Prevotella RepID=D1PWI6_9BACT Length = 507 Score = 203 bits (516), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 154/497 (30%), Positives = 247/497 (49%), Gaps = 31/497 (6%) Query: 19 QTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEF----DMPWIPR 74 ++ GV V +AL+ + + L + L A +P Q F +PW Sbjct: 24 DSQVRGVMVVGSVALLALAIYLVFAF---------LGARATMPAEQYPFLFGDAIPWFEP 74 Query: 75 FGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAI 134 I +DG++++M++L+ ++ + SW ++ Q + L + GV G F++ Sbjct: 75 LNIFYRTGVDGIAVVMILLSAIIVITGTFASW-QLHPMQKEYFLWFTLLSAGVFGFFISE 133 Query: 135 DMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVF 194 D+F F F+E+ L+PMY LI +WG + +A K + +++I IL + F Sbjct: 134 DLFTMFMFYEVALIPMYLLIGVWGTGPKE-----YSAMKLTLMLMGGSALLIIGILGIYF 188 Query: 195 VHYNATGVWTFNYEELLNT-PMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPT 253 + +G +T + + + + V+ + FI F V + P H W PD H+ APT Sbjct: 189 FNGQYSGTYTMDVVAIAQSHAIPVFVQKVFFPFIFIGFGVLGALFPFHTWSPDGHASAPT 248 Query: 254 AGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKR 313 A S+ AG+L+K YG R ++ L P+A+ E I + L I + YGA A QTD+K Sbjct: 249 AVSMLHAGVLMKLGGYGCFRVAMFLLPDAARELCWIFLILTTISVVYGALSACVQTDLKY 308 Query: 314 LIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRM 373 + AY+SVSH G VL A+ +Q A GAV+QM++HGL A F + G +Y R TRD+R Sbjct: 309 INAYSSVSHCGLVLFALCMMTQTAINGAVLQMLSHGLMTALFFAVIGMIYHRTGTRDVRR 368 Query: 374 MGGLWSKMKWLPALSLFFAV---ATLGMPGTGNFVGEFMILFGSFQVVP----VITVIST 426 +GGL MK LP LS+ + V A LG+P FV E I G+FQV T+I+ Sbjct: 369 LGGL---MKILPFLSVAYVVAGLANLGLPLFSGFVAEMNIFVGAFQVNDTFHRTCTIIAC 425 Query: 427 FGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPIL 486 +V +VY L ++ + + K +Q +L + E + L+ + LG +P Sbjct: 426 TSIVITAVYILRVVGKILYQKVPNQ-DYYKLTDATWDERLAVGALIFCVAGLGTFPLWAQ 484 Query: 487 DTSHSAIGNIQQWFVNS 503 + A+G + Q + S Sbjct: 485 SIINDAVGPMIQHIMGS 501 >UniRef50_Q47IK6 Proton-translocating NADH-quinone oxidoreductase, chain M n=2 Tax=Proteobacteria RepID=Q47IK6_DECAR Length = 485 Score = 202 bits (514), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 134/431 (31%), Positives = 228/431 (52%), Gaps = 11/431 (2%) Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 ++Q + WI + L IDG+++L + T LL + +++ SW + + L+ Sbjct: 56 RFQLVERVSWIASLNVHYLLGIDGIAVLFLPATALLFLGSLVASWNAVHDAPRLHYSLLL 115 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + +G+F A+D LFF FWE+ LVP+YFL+ WG R AAT++F+ A Sbjct: 116 LLQTANLGIFCALDTALFFVFWELTLVPLYFLLGRWGVTTG----RAAAATRYFLIMLAG 171 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 G+ +L+A + L + V TF+ LL P+ + + L I F VK+P+VPLH Sbjct: 172 GIPLLLAFVILAV----SQSVPTFDLMALLAAPLPRSTQTAVFLLCLIGFGVKVPLVPLH 227 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLP AP + + L G LK A+GL+RF++PL P+A+ + + LG + I YG Sbjct: 228 TWLPQFSLAAPGSLTALLVG--LKLGAFGLIRFAVPLAPDAALDMHWLLAGLGTVAILYG 285 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 A AQ++++ +AY S+ H+G ++ + + + QGAV +++ ++ G FIL Sbjct: 286 AVGMLAQSNLRVGLAYASICHVGLAVLGLASYTAQGAQGAVSLLLSFSVATGGAFILLEF 345 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 L +R + D+ +GG M L L +A +GMPGT +F GEF+++ + Sbjct: 346 LRQRTGSTDIHALGGAAKTMPLLATGFLICGLAGVGMPGTSSFPGEFLLIIAALHSHTGA 405 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 + + FGL A+ LA+ +A+FG + + +Q + RE +++ L+V++ +G Y Sbjct: 406 GMAALFGLSIAAGGFLALYRKAFFGPVERESVAQAT-DLRPREWAVLVALIVMIAGIGIY 464 Query: 482 PQPILDTSHSA 492 P P ++ A Sbjct: 465 PGPWIEIVRPA 475 >UniRef50_D2B4L0 NADH dehydrogenase (Quinone) n=17 Tax=Actinomycetales RepID=D2B4L0_STRRD Length = 537 Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 173/455 (38%), Positives = 246/455 (54%), Gaps = 43/455 (9%) Query: 24 GVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAI 83 G ++ R AL G+T ALS+ L G+ +A + Q D+ W+P + HL + Sbjct: 30 GGRLLRVHALAVSGITFALSVVL--AAGFDYGDAARV---QFSTDLAWVPGLDLRFHLGV 84 Query: 84 DGLSLLMVVLTGLLGV-LAVLCSWKEIE--------KYQGFFHLNLMWIL----GGVIGV 130 DG+SL +VVLT LL +V W + K G L++ L G+IG Sbjct: 85 DGISLPLVVLTTLLTFLCSVYLCWGRADGPGQLLRPKSGGNRPRALVFTLLVLEVGMIGT 144 Query: 131 FLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAIL 190 FLA+D+ LFF F+E++L+PMYF+IA+WG G+ R AA KF +YT +V+L+ +L Sbjct: 145 FLALDLLLFFVFFEVVLIPMYFVIAVWG-----GRARRAAAIKFILYTLLGSVVLLLGLL 199 Query: 191 ALVFVHYNATGVWT-FNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHS 249 + + TG MSS V+ L + I AVK P+ PLH WLP AH+ Sbjct: 200 LI----WAQTGTLDMIALARAQGAGMSSSVQVLAFVAVGIGLAVKTPMWPLHTWLPAAHT 255 Query: 250 QAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLG---VIGIFYGAWMAF 306 +APT GSV LAG+LLK YG R ++P+ P+ +A AP WLG VIGI YG+ Sbjct: 256 EAPTVGSVLLAGVLLKMGTYGFARIAIPVLPDGAAAMAP---WLGAFAVIGIVYGSLACL 312 Query: 307 AQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERI 366 AQ D+KR+IAY+S+ HMGFVL+ T + + GA+ IAHGL A LF + G + +R Sbjct: 313 AQRDLKRMIAYSSIGHMGFVLLGFATLTPVGINGALFGNIAHGLITALLFFIAGAIKDRY 372 Query: 367 HTRDM-RMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVIT--- 422 T DM + GG+ S++ L +L F AVA+LGMPG F GE + L G++ ++ Sbjct: 373 GTTDMPSLGGGMLSRLPHLGSLLTFAAVASLGMPGLAGFWGEMLALLGAYGPAAGLSRPL 432 Query: 423 -----VISTFGLVFASVYSLAMLHRAYFGKAKSQI 452 + G V + Y L ML R G++ + Sbjct: 433 YLTFMALGGLGTVLTAAYFLLMLSRVTHGRSVETV 467 >UniRef50_C0AF36 NADH dehydrogenase (Quinone) (Fragment) n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0AF36_9BACT Length = 409 Score = 201 bits (512), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 144/405 (35%), Positives = 212/405 (52%), Gaps = 43/405 (10%) Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKA-SDGKTR----ITAATKFFIY 177 I G +GVFLA D FL+F FWE+ L P +FL L+G+ S+G TR AA +F IY Sbjct: 15 IQGAALGVFLAQDFFLWFLFWELSLFPAFFLTKLYGNDTDSNGDTRPGNASRAAYQFVIY 74 Query: 178 TQASGLVMLIAILALVFVHYNATGVWTFNYEEL---------LNTPMSSGVEYLLMLGFF 228 T ML++ A+ Y TG T N+EEL L +++ L ML FF Sbjct: 75 TMGGSAFMLLSFAAI----YAVTG--TLNFEELQFHLFSSDKLADKLAAVSPALPMLVFF 128 Query: 229 ---IAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAE 285 + AVK+P+ P H WLP A++ APT S+ L I+ K YG +R +FP Sbjct: 129 GVLLGLAVKVPLFPFHTWLPSAYAAAPTGASIFLTAIMSKMGLYGFIRILWSIFPIELII 188 Query: 286 FAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIY----------TGSQ 335 API +W + G+ +GA+ A Q D+KR+IAY+S++H+G+ L+A + + SQ Sbjct: 189 TAPILIWFALAGVVFGAFAALRQRDLKRMIAYSSINHLGYCLLAFFAFVIAADHLPSTSQ 248 Query: 336 L---AYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFA 392 A G ++QM HGLSAA LF G L R T +R MG K P + F Sbjct: 249 TFTAALTGMILQMFNHGLSAAALFYCIGILENR--TGGLRGMGDFGGVRKVAPIFAAFCG 306 Query: 393 V---ATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAK 449 + ++LG+PG FVGEF+I G F PV+ I+T GL+ +++ L R + G Sbjct: 307 ISMFSSLGLPGLNGFVGEFLIFRGVFGAAPVVAAIATLGLLATALFLLTFWQRVFHGPVT 366 Query: 450 SQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIG 494 +Q + ++ E+ + +VL+ +LG PQ +++ S +G Sbjct: 367 PN--AQRVTDLTATEILTLAPAIVLMFVLGLAPQLLINLFRSLLG 409 >UniRef50_C9RKX5 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKX5_FIBSS Length = 504 Score = 201 bits (511), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 139/434 (32%), Positives = 221/434 (50%), Gaps = 21/434 (4%) Query: 68 DMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGV 127 D+PW+ F + DGL++L++ LT + VL S K I+ Q F + + V Sbjct: 75 DIPWLSMFNAHYIVGADGLNMLLLALTAFIVWAGVLVSLK-IKGNQKIFFALIQLLATSV 133 Query: 128 IGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASD-GKTRITAATKFFIYTQASGLVML 186 GV+++ D+ LFF F+EM + MY +IA +G D G ++T T A G M Sbjct: 134 YGVYMSFDLVLFFVFYEMEALCMYLMIACYGSGKRDYGGKKLT-------LTLAFGSSM- 185 Query: 187 IAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPD 246 ILA +F Y +G ++N E+ T + + F+ FAV + P H W PD Sbjct: 186 --ILATLFGLYFESGATSWNLIEIAKTTLPMDFQMWAFPLMFMGFAVSSSLFPFHFWSPD 243 Query: 247 AHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAF 306 HS APTA S+ AG+++K AYG LR ++ L P A+ + P + L + + G ++A Sbjct: 244 GHSAAPTAVSMLAAGVMMKMGAYGCLRVAMFLMPEAAKIWLPYVVALLIFNVVLGPFIAI 303 Query: 307 AQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERI 366 D+K + AY+S+SH+G + + + + + +GA +QMI+HG F G +YER Sbjct: 304 RHKDLKYITAYSSISHLGLIFLGLAALTPIGLRGASLQMISHGFLTGLFFATIGMIYERT 363 Query: 367 HTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ----VVPVIT 422 HTRD+ MGG+ KM +L + A LG+PG F+ E I G+FQ + ++T Sbjct: 364 HTRDITEMGGIMRKMPFLGVGFVLAGFAGLGLPGFSGFIAESTIFIGAFQQDSTLTRIVT 423 Query: 423 VISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYP 482 +++ + +VY L +R G + + L RE +I++LV L+ +G P Sbjct: 424 ILAILSITTTAVYILQTANRMLHGPLPQKY--ESLTDGCFREKLVIVVLVACLLFIGVCP 481 Query: 483 ---QPILDTSHSAI 493 +LD S + I Sbjct: 482 GWISELLDQSIAPI 495 >UniRef50_C9RWL8 Proton-translocating NADH-quinone oxidoreductase, chain M n=7 Tax=Geobacillus RepID=C9RWL8_GEOSY Length = 525 Score = 201 bits (511), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 179/518 (34%), Positives = 258/518 (49%), Gaps = 48/518 (9%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGG--YSLTQSA 58 M L L+ P +G L + ++ +W+ L L+L ++Q G + L + Sbjct: 2 MFLSLLVFSPLLGIMLLMFVRKTDERMIQWLGTAATVPPLILALFAFIQSGRGFRLERLD 61 Query: 59 GIPQWQSEFDMPWIPR--FGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFF 116 W D+P++ + I L IDGLSL+ +VLT +L LA L S + +G+F Sbjct: 62 EARDWVRLTDLPFLTDAAYVIRYELGIDGLSLVFIVLTAVLATLAALASMLVKTEKKGYF 121 Query: 117 HLNLMWILG---GVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATK 173 +W+L G++GVF A + FF F E+ LV M+ L+ WG G R AA Sbjct: 122 ----LWLLALEIGMLGVFSAANFVWFFLFLEVTLVAMFLLVGKWG-----GFERERAAYS 172 Query: 174 FFIYTQASGLVMLIAILALVFVHYNATGVWTFNY-EELLNTPMSSG--VEYLLMLG---- 226 + +Y ++L+ I L+ TG F E+L+ P + G + L G Sbjct: 173 YLLYNGLGSALLLVVIAVLL----ARTGTANFALLHEMLHNPAAEGQLIAPLTAEGRRWL 228 Query: 227 ---FFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNAS 283 +AFAVK+P VP H WL H +AP + AG+LLK AAYG++RF + LFP+ Sbjct: 229 LGGLLLAFAVKLPAVPFHRWLIRVHVEAPPPVVMLHAGVLLKIAAYGMIRFGVGLFPDEF 288 Query: 284 AEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVI 343 FA + GVI + YGA +A Q ++KR++AY+SVSHMG VLI + ++ QGAV Sbjct: 289 RSFAGVLALFGVINVLYGALLALRQRELKRVLAYSSVSHMGVVLIGLGALNEAGIQGAVF 348 Query: 344 QMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGN 403 Q +AHGL +A F+L G L R+ T D+ GGL M L A+A LG+PG Sbjct: 349 QSVAHGLISALSFLLVGVLAHRMGTTDINRFGGLTKAMPLFSGYLLTAALALLGLPGLAG 408 Query: 404 FVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQ------------ 451 FVGEF G FQ P + + GL+FA+VYSL + FG+ + Q Sbjct: 409 FVGEFTSFLGLFQTKPALAAVGALGLIFAAVYSLKAVLDITFGRPRDQREAVMGWREPQA 468 Query: 452 -IASQELP-----GMSLRELFMILLLVVLLVLLGFYPQ 483 AS P + +E +LV L+V +G YPQ Sbjct: 469 SAASLGEPQGGVVDLQGKEAVPAFILVALIVAVGVYPQ 506 >UniRef50_B1ZRS1 Proton-translocating NADH-quinone oxidoreductase, chain M n=3 Tax=Verrucomicrobia RepID=B1ZRS1_OPITP Length = 509 Score = 201 bits (511), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 144/473 (30%), Positives = 246/473 (52%), Gaps = 32/473 (6%) Query: 29 RW---IALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPR----FGISIHL 81 RW +A + G+ L+L +W + +PQ + P +GI + L Sbjct: 30 RWSVRLAYVAFGIPALLALHVWWH-------FSAVPQENGYAFLTNYPTGLSAYGIGLKL 82 Query: 82 AIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFF 141 ++G+SL + VL L+G+ A L + + + + + L+ + GG++GVF ++D+F F+F Sbjct: 83 GLNGISLPLFVLAALVGLAAGLYAIQSQAERLKIYLMLLLIMQGGLLGVFASVDVFFFYF 142 Query: 142 FWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATG 201 F E+ L+P + ++ +WG G+ R AA K IY ++ L+ ++AL Y +G Sbjct: 143 FHELALIPTFIMVGVWG-----GRDRSYAAMKLTIYLTVGAMLSLLGLIAL----YVKSG 193 Query: 202 VWTFN----YEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSV 257 +F+ + + P+ ++ + F + + + P H W P + AP++ ++ Sbjct: 194 ANSFDLITLRQYVAGQPLGETLQQNIFAVLMFGFGILVSLWPFHTWAPLGYGAAPSSAAM 253 Query: 258 DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG-IFYGAWMAFAQTDIKRLIA 316 AG+L K YGL++ +LPL P A ++ WL VIG + + AQ D+K++I Sbjct: 254 LHAGVLKKFGLYGLIQVALPLLPAGLAHWSHPLAWLAVIGNVLVVGLITMAQRDLKQMIG 313 Query: 317 YTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGG 376 Y+SV HMG+ + I GS L G V+ M+AHGLS A LF+L ++ R HT M MGG Sbjct: 314 YSSVMHMGYAFLGIAAGSTLGVGGVVMIMVAHGLSVALLFLLATSIHHRTHTFAMDEMGG 373 Query: 377 LWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYS 436 L K L A A++G+PG NF GEF I ++ P+IT ++ G++ +++Y Sbjct: 374 LAQKTPVLAAFFTAATFASIGLPGFANFWGEFTIFIALWRFSPLITALAVSGIIISAIYG 433 Query: 437 LAMLHRAYFGKAKSQIA--SQELPGMSLR--ELFMILLLVVLLVLLGFYPQPI 485 L + +FG + +A + + P LR E L+L+ L+ +GF+P+ I Sbjct: 434 LRSVANVFFGAPTAALATVTAQHPPADLRWSEKVPALILLAALLFVGFWPKSI 486 >UniRef50_P15582 NADH-ubiquinone oxidoreductase chain 4 n=34 Tax=Ascomycota RepID=NU4M_PODAN Length = 519 Score = 201 bits (510), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 151/463 (32%), Positives = 251/463 (54%), Gaps = 20/463 (4%) Query: 29 RWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSL 88 + IA IT + L +SL +++ +S Q +Q D + + +I+L +DGLS+ Sbjct: 66 KKIAFITTIMNLIVSLIIYILFDFSTNQ------FQFVQDALELSVY--NIYLGVDGLSI 117 Query: 89 LMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLV 148 V+LT ++ +A++ +W I + + ++ + ++ VFL +D+ LF+ F+E +L Sbjct: 118 YFVLLTTIIMPIALISNWNSITHNIKAYLIIILLLETLLLAVFLVLDVLLFYIFFESILP 177 Query: 149 PMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYE 208 P++ LI L+G S K R A+ F+YT L +L++IL + ++ + T + Sbjct: 178 PLFILIGLFG---SSNKVR--ASFYIFLYTLLGSLFLLLSILTM------SSLIGTTYLD 226 Query: 209 ELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAA 268 L + + L LG FIAFAVK P V L+ WL AH ++P GS+ LAGI+LK + Sbjct: 227 VLSKSNFEYTTQIFLFLGVFIAFAVKTPTVFLNSWLLKAHVESPLGGSIVLAGIVLKLSL 286 Query: 269 YGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLI 328 YG+ R LPL P S + I +G+I I Y ++ DIK LIAY+SVSH LI Sbjct: 287 YGIFRLILPLLPKISLNYTSIIFSIGIITIIYASFSTLRTIDIKELIAYSSVSHAAVYLI 346 Query: 329 AIYTGSQLAYQGAVIQMIAHGLSAAGLFILC-GQLYERIHTRDMRMMGGLWSKMKWLPAL 387 +++ +G ++ + HG ++GLFI G LY+R TR + G M L Sbjct: 347 GVFSNIIQGIEGGILLGLGHGFVSSGLFICAGGVLYDRSGTRIISYYRGTAQVMPLFSIL 406 Query: 388 SLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGK 447 + G P T NFVGEFM L+G+F+ +P++ + S+ ++F++ Y++ M +R FG Sbjct: 407 FFILCLGNCGAPLTLNFVGEFMSLYGTFERLPLLGLFSSSSMIFSAAYTIYMYNRIAFGG 466 Query: 448 AKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSH 490 + S+ + + ++ RE F++ L++ ++ G YP ILD H Sbjct: 467 SFSKFFEENIGDVTKREFFLLFTLIIFTIMFGIYPSFILDGLH 509 >UniRef50_A7XPD6 NADH-ubiquinone oxidoreductase chain 4 n=58 Tax=Metazoa RepID=A7XPD6_9CNID Length = 496 Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 158/437 (36%), Positives = 241/437 (55%), Gaps = 17/437 (3%) Query: 51 GYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIE 110 G S Q + +W + W P I A+DG+SL+ ++LT L + +L S K I+ Sbjct: 65 GESHFQFFSLVEWNIFSTLDWGP-----IVFAVDGVSLVFLLLTTFLIPICILISQKSIK 119 Query: 111 KYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITA 170 F L L ++ +IGVF+ D+ LF+ F+E +L+PM+FLI +WG + + Sbjct: 120 FLFKEFLLCLFFLEFLLIGVFIVFDLLLFYLFFEGILIPMFFLIGIWGSREEKVRASFYF 179 Query: 171 ATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIA 230 FI + ++L Y G T +Y LLN + ++ ++G F++ Sbjct: 180 FFFTFIGSLFFFFIILFL--------YQRIG--TTDYFLLLNIKLFLNIQKWALVGVFLS 229 Query: 231 FAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIA 290 FAVK+P++P H WLP AH +AP AGSV LAGILLK YGLLRFS PLFP AS ++P+ Sbjct: 230 FAVKLPLIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGLLRFSWPLFPGASLYWSPVI 289 Query: 291 MWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGL 350 ++ V+ + YG M Q D KRL+AY+SV+HMG V + ++T GA+ M+AHG Sbjct: 290 VFFSVVAVVYGGLMTCRQIDFKRLVAYSSVAHMGLVPLGLFTHVIEGLIGALFLMLAHGF 349 Query: 351 SAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMI 410 ++ LFI LY+R HTR ++ GL M L ++A +G P + NFVGEF Sbjct: 350 VSSALFIGVTFLYDRHHTRLIKYYRGLTLTMPLFVITMLILSLANMGFPLSCNFVGEFFS 409 Query: 411 LFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILL 470 L FQ + + G++F+++YSL++ +R FG + + +S RE+F+I Sbjct: 410 LLAVFQYHYGVGMFVILGVLFSAIYSLSLFNRISFGGGSNYLLFNR--DLSRREIFVIFP 467 Query: 471 LVVLLVLLGFYPQPILD 487 ++++ L G P PI+D Sbjct: 468 FLLIIFLGGIVPFPIID 484 >UniRef50_O21047 NADH-ubiquinone oxidoreductase chain 4 n=3 Tax=Dictyostelium RepID=NU4M_DICDI Length = 540 Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 130/400 (32%), Positives = 207/400 (51%), Gaps = 15/400 (3%) Query: 76 GISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI-EKYQGFFHLNLMWILGGVIGVFLAI 134 I+I +IDG+S + + LT +L + L S + I EK + F + L+ +I F A Sbjct: 79 NINIGYSIDGISAIFIFLTIILILSCNLISIRVIKEKTEQKFQIMLLLTEILIINFFAAT 138 Query: 135 DMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVF 194 D+ + +E L+PM +I +WG + + AA + IYT + ML++I L Sbjct: 139 DLVQLYIVYEATLIPMVIMIGVWGSRTE----KKIAAFQILIYTLIGSIFMLMSIGIL-- 192 Query: 195 VHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTA 254 Y+ G + + V L+ +GFFI FAVK+P+ PLH WL AH +APTA Sbjct: 193 --YSTLGTTDYIMIREYIDVLPENVRKLIFIGFFIGFAVKIPIAPLHLWLLRAHVEAPTA 250 Query: 255 GSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRL 314 GSV LAGILLK YG +R+++ LFP+ + PI + +I I Y Q D+KR+ Sbjct: 251 GSVLLAGILLKLGGYGYIRYNIGLFPDLCEYYFPIIGGICLISILYTGIATLTQLDVKRI 310 Query: 315 IAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMM 374 +AY+S+SHM +++ +++G +G +I MI HG+ + GLF+ G +Y+R TR + Sbjct: 311 VAYSSISHMNVIVLGLFSGVLQGIEGGIILMIGHGVVSGGLFLCIGVIYDRCKTRIVYAY 370 Query: 375 GGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASV 434 L M + L + + P T NFVGE +I G + +I S ++ ++ Sbjct: 371 NNLVHVMPIMAILFFLLVLGNIAFPITSNFVGELLIFIGLIKKNIIIAFFSALSMIVTAI 430 Query: 435 YSLAMLHRAYF------GKAKSQIASQELPGMSLRELFMI 468 YS + +R +F +A I+S+ + LF+I Sbjct: 431 YSFWLYNRIFFVNEIIKREANEVISSKGQIVADMNALFLI 470 >UniRef50_A0RME0 NADH-quinone oxidoreductase chain m n=1 Tax=Campylobacter fetus subsp. fetus 82-40 RepID=A0RME0_CAMFF Length = 495 Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 132/506 (26%), Positives = 259/506 (51%), Gaps = 29/506 (5%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L +I +PFI G L F K + A + + L L L+ + +AG+ Sbjct: 7 ILSLIIFLPFIVGVLI--ALFFNDKAGKLTAFVVSIVVAVLGLVLF----FKFDPNAGMQ 60 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSL--LMVVLTGLLGVLAVLCSWKEIEKYQGFFHLN 119 S + +P++GIS + +DG++L L+++ + + +L + K +G++ N Sbjct: 61 FVDS---ISLVPKYGISYLVGVDGINLYILLIITSAFPPLFFILKNRK-----KGYWA-N 111 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 ++++ G + V ++D+ F+ WEMML+P++ ++ ++G + R A Y Sbjct: 112 MLFMQSGFLSVVSSLDLVYFYAGWEMMLIPIFIMVGIYGKDSG----RAGALMDMMYYAI 167 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 ++ML AI+ + HY G ++F E+L+ ++S ++ +L F +AF +K+P+ P Sbjct: 168 FGSMIMLGAIIYIGAAHYYEFGFFSFRLEDLIKVSLNSDLQTVLFFCFMLAFVIKLPLFP 227 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 H W+ +A++++ T + L+ I K A + +LRF LPLFP + ++ + LG+ + Sbjct: 228 FHLWMSNAYTKSLTTATFMLSVIASKVAVFAILRFVLPLFPVSFVNYSTWFISLGLFSML 287 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 Y A D K L+AY S SH+G ++ ++ A G++ Q++AH +++ +F+L Sbjct: 288 YFGIAAIKVKDFKTLLAYASASHLGLIIAGVFALDVEAMTGSMYQVVAHAITSGIMFLLV 347 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVA---TLGMPGTGNFVGEFMILFGSFQ 416 G + E++ TR + +GGL K P + FA+A ++G+P T FVGE +I+FG F+ Sbjct: 348 GMISEQLGTRKISKLGGLAIKA---PVFATIFAIAMISSVGLPATVGFVGELLIIFGLFK 404 Query: 417 VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLV 476 + + T +V ++Y + +A A + + RE+ L+ V ++ Sbjct: 405 ANLIYGIFGTTSIVIGAIYMFIVYRKAILQNTNELTA--KFKDLRKREILAFLVAVAMIF 462 Query: 477 LLGFYPQPILDTSHSAIGNIQQWFVN 502 ++G YP+P + + + ++ Sbjct: 463 IMGIYPKPFIKQIEPTMNERYESYIK 488 >UniRef50_B2XX63 NADH-ubiquinone oxidoreductase chain 4 n=3 Tax=Dictyosteliida RepID=B2XX63_9MYCE Length = 535 Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 136/437 (31%), Positives = 224/437 (51%), Gaps = 29/437 (6%) Query: 68 DMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGV 127 D + I+I +IDG+ ++ + LT LL V VL SW +++ + + L I + Sbjct: 105 DYIYTGMLNINIGSSIDGIGIIFIWLTTLLIVSCVLISWTVVKEEVKMYMILLFIIEILL 164 Query: 128 IGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLI 187 I +F ID+ F+ +E +L+P+ +I++WG + + + AA + F+YT + ML Sbjct: 165 INLFGVIDLIHFYIIYESILIPIVIMISIWGSR----EEKKIAAYQIFVYTLIGSIFMLS 220 Query: 188 AILALVFVHYNAT-------GVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 AI ++ + T G+WT + E + LL +G FI FAVK+P+VPL Sbjct: 221 AI-GYIYYMFGTTDYFIIKEGIWTLSDIE----------QKLLFIGLFIGFAVKIPMVPL 269 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFA-PIAMWLGVIGIF 299 H WL AH +APTAGSV LAGILLK YG LRF++ LF + +F P + +I I Sbjct: 270 HLWLLRAHVEAPTAGSVLLAGILLKMGGYGFLRFNVGLFSSNILDFFFPYITVICIISIL 329 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 Y Q DIK++IAY+S+SHM V++ I++ + +G+V M++HG + LF+ Sbjct: 330 YTGIATILQLDIKKIIAYSSISHMNVVVLGIFSQNIQGIEGSVFLMVSHGFVSGSLFLCI 389 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP 419 G +YE+ +R + L M + +A + P T +F+GE +I G + Sbjct: 390 GMIYEQTKSRMLYSYNNLAVVMPNYAIIFFLLTLANIAFPITSSFIGELLIFVGVMKANI 449 Query: 420 VITVISTFGLVFASVYSLAMLHRAYF--GKAKSQIASQELPG----MSLRELFMILLLVV 473 + G++ YS + +R +F G Q+ G ++ RE ++L ++ Sbjct: 450 IAAFFGGMGMIITVFYSFWLYNRLFFDNGMLDEQVKFLNKKGKFRDINEREFASVVLPLI 509 Query: 474 LLVLLGFYPQPILDTSH 490 + +LG P +L+ H Sbjct: 510 GVGVLGVAPNVLLNIIH 526 >UniRef50_Q5N0H9 NADH dehydrogenase subunit 4 n=7 Tax=Cyanobacteria RepID=Q5N0H9_SYNP6 Length = 513 Score = 192 bits (487), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 152/437 (34%), Positives = 239/437 (54%), Gaps = 14/437 (3%) Query: 59 GIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHL 118 + + Q D W+P GI L +DGLSL +++L+ LL +LA+ S + + + + L Sbjct: 51 AVAEPQQAIDWGWLPSLGIHFSLGLDGLSLPLLLLSSLLTLLAIASSPTDQTRPRLCYSL 110 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 + G I + L+ D+ LF +E+ L+PMY LI++WG G+ R AAT+F I+T Sbjct: 111 IFLAAAGMAIAL-LSRDLLLFVLGYELELIPMYLLISIWG-----GEQRGPAATRFLIFT 164 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 SG+++L+ +A + ++F +++L + ++ L+L F AFA+K+P+V Sbjct: 165 AISGILLLLGAIATAVLSSQP---FSFAFDQLQTIELPLALQLPLLLLFVAAFAIKLPLV 221 Query: 239 PLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 P H W P A+ QA A ++ L G + K YGL RF FP A + AP L + Sbjct: 222 PFHSWQPAAYGQASPAIAMLLGGAIAKLGGYGLFRFGCSFFPEAWSLIAPSLAVLAAVTA 281 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFIL 358 YG+ A QTD++RL+A++S+ HMG +L+A+ G+ LA Q A+ QM+AHGL A LF L Sbjct: 282 LYGSLNALRQTDLQRLVAFSSIGHMGTLLLALAAGTPLALQRAIAQMVAHGLILALLFQL 341 Query: 359 CGQLYERIHTRDMRMMGGLWSKMK---WLPALSLFFAVATLGMPGTGNFVGEFMILFGSF 415 G + RD + GL + ++ L L A+A+ G+PG FV EF+I GSF Sbjct: 342 VGTIERVTGRRDRDQLSGLLNPIRGLPLTAGLLLLAAMASAGIPGLVGFVAEFLIFQGSF 401 Query: 416 QVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLL 475 + P TV +VY +++++RA FGK +Q A +S R ++L L V+ Sbjct: 402 AIFPWATVGCIAASGLTAVYFVSLINRACFGKLDNQEARWRPVTVSERWPAVVLALTVM- 460 Query: 476 VLLGFYPQPILDTSHSA 492 LG PQ ++ S S+ Sbjct: 461 -ALGLAPQGLVRWSESS 476 >UniRef50_A9RAH8 NADH-ubiquinone oxidoreductase chain 4 n=7 Tax=Saccharomycetales RepID=NU4M_DEBHA Length = 467 Score = 190 bits (483), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 122/415 (29%), Positives = 222/415 (53%), Gaps = 22/415 (5%) Query: 77 ISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEK---YQGFFHLNLMWILGGVIGVFLA 133 I ++ DG++ ++++LT + L+++ +W ++ ++ +L +M ++ F+ Sbjct: 45 IDVYYTSDGMADVLMLLTMYMLPLSMISNWNNMKSTLYFELVLNLGMMLLIN-----FMC 99 Query: 134 IDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALV 193 DM F+ ++E L P++ L+ L+G R AA +YT S L ML+A +AL Sbjct: 100 QDMTSFYMYFEASLAPLFMLMGLYG-----AANRDKAADYVLMYTLFSSLFMLLA-MALY 153 Query: 194 FVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPT 253 V + T +Y+ +S ++ +L L + AVK P+ PLH WLP HS++P Sbjct: 154 EVMLDNT-----DYQATSLLVLSLDLQCMLFLAMSMGIAVKTPLAPLHTWLPVVHSESPL 208 Query: 254 AGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKR 313 AGS+ LAG++LK A + ++R LP +AS + P + V+ + Y + + QTD+K Sbjct: 209 AGSMLLAGMILKLAVFAMIRLILPTLSDASVTYTPFVYVMCVMTMMYTSIITLRQTDLKV 268 Query: 314 LIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC-GQLYERIHTRDMR 372 +IAY+S+SHM ++ + + + G+++ IAHG + GLF++ G LY+R H R M Sbjct: 269 IIAYSSISHMAVCMLGMLSNTMTGITGSLVLCIAHGFVSPGLFMMVGGMLYDRYHNRLMY 328 Query: 373 MMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFA 432 GL S M +L + + +G P + NF+GE + L G+ PV+ ++ ++ + Sbjct: 329 YFQGLISYMPYLSVYFMMLSFCNMGTPLSINFIGEMLSLTGAINRAPVLGAMAALSVLLS 388 Query: 433 SVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILD 487 + Y + + +R G K+ S + RE +++ L+V + LGF+P ++D Sbjct: 389 ACYQMKLTNRLT-GGIKTPYMSLT-SDCTYRETVLMITLIVPTMFLGFFPSWVMD 441 >UniRef50_C7RLG1 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RLG1_9PROT Length = 504 Score = 190 bits (482), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 160/438 (36%), Positives = 236/438 (53%), Gaps = 23/438 (5%) Query: 70 PWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIG 129 PW PR G + L +DG+SL MVVL LL +A++ S + +F L L+ +I Sbjct: 77 PWNPRVGSHLALGLDGISLPMVVLATLLSFVAIVSSTGIRSGARLYFSLLLVLETSLLI- 135 Query: 130 VFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAI 189 VF A D LF+ WE+ L+P++FLI G G R AA F +YT + MLIA+ Sbjct: 136 VFTARDWSLFYVCWELTLIPLFFLIDRLG-----GANRHRAALNFVLYTLGGSVFMLIAL 190 Query: 190 LALVFVHYNATGVWTFNYEELLNT--PMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDA 247 L L Y+A +F ++ + + L+ LG + F VKMP+VPLHGWLP A Sbjct: 191 LLL----YDAAPGHSFAMADMAAGGAELPVKTQILVFLGLLLGFGVKMPIVPLHGWLPLA 246 Query: 248 HSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFA 307 H +AP+ S+ L+GILLK AYGL+R + L P A L +I + YGA +A+ Sbjct: 247 HVEAPSPISILLSGILLKMGAYGLIRAAATL-PAAVQALQDWLALLALISLLYGAVLAWR 305 Query: 308 QTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIH 367 QTD+K +IAY+S+SHMG VL+ I + GAV QM+AHGL+A LF+L G LYER H Sbjct: 306 QTDLKAMIAYSSISHMGVVLLGIAALNPAGLSGAVTQMVAHGLAAGLLFLLIGLLYERTH 365 Query: 368 TRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTF 427 TRD+ G L +F +A++G+PG+ F+ E +L G++ V+ + Sbjct: 366 TRDLGAYGSLNRSAPRFAVAIVFTLLASVGLPGSAGFMAELQVLVGAYARWGGWLVLLSI 425 Query: 428 GLVFASVYSLAML-------HRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 G++ ++ Y+L + R + G A A +L E LL+ ++ +GF Sbjct: 426 GILISAAYALRAIRCLSTGPERPFAGAAAGVTAFADL---KRSESAAAGLLIAGILGIGF 482 Query: 481 YPQPILDTSHSAIGNIQQ 498 YP P+L S++ + + Sbjct: 483 YPAPLLSLMASSVARLVR 500 >UniRef50_C9RJZ1 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJZ1_FIBSS Length = 546 Score = 188 bits (478), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 151/493 (30%), Positives = 258/493 (52%), Gaps = 22/493 (4%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIA-LITMGLTLALSLQLWLQGGYSLTQSAG 59 MLL L+L PF+ L T + K +A L+ +G T A+S+ L + GG T + Sbjct: 1 MLLHLLVLAPFVAAILMVMTSKEDSKSSSRLAILMGIGFT-AMSVAL-IAGGSVSTDAI- 57 Query: 60 IPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLN 119 +W F +P + + +L GL+ MV L+ L +++++ + + F + Sbjct: 58 --EW---FQIPGC-KGPVYYYLTSHGLASWMVFLSSGLSLVSLISARGITCRSYRNFAIG 111 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 + ++G + G FLA D LFFFF+E M++P LIA +G GK R+ AA F IYT Sbjct: 112 IFSLMGAMNGTFLAADAVLFFFFFEAMVIPAAVLIAGFG-----GKDRMKAAMTFAIYTL 166 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 M++A+ ++ + N+T + + + G + +L++ F +AF VK P+ P Sbjct: 167 VGSAPMMVALWYILTIADNSTLISL----AVAVQGLPEGTQNVLLVCFLLAFLVKTPIFP 222 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 HGW +++AP S L G + K +G + + LP+FP + + + MWLG+ Sbjct: 223 FHGWQAITYAEAPAPLSAILTGAMSKAGVFGFIVWILPIFPLSMNAVSGL-MWLGLFTAV 281 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 YGA MA TD K+L+A++S+ H+G + +++ S+ ++ ++AHG+SA F L Sbjct: 282 YGALMALRATDGKKLLAFSSMGHLGLAVAGVFSLSEAMLPAVLVLLVAHGISAGAQFYLM 341 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP 419 G TR++ +GGL SK L F V L +PGT FVGEF +L + + P Sbjct: 342 GIAERMAGTRELDQLGGLSSKNPVFSTLFGFAGVMALAVPGTAGFVGEFSVLLALWDMGP 401 Query: 420 VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLG 479 + +++ F L+ ++ Y L + + FGK +++ + M L + + ++L++LLV G Sbjct: 402 LPALVAGFTLILSAAYMLRFIQKVIFGK-QAREYEEGRRTMPLEGVSIAVMLLLLLV-FG 459 Query: 480 FYPQPILDTSHSA 492 F+P + DT + A Sbjct: 460 FHPAYVTDTLNEA 472 >UniRef50_D2EEH3 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEH3_9EURY Length = 470 Score = 187 bits (475), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 124/387 (32%), Positives = 217/387 (56%), Gaps = 11/387 (2%) Query: 102 VLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKA 161 +L + KEI++ + F++ + + VI VF++ ++ +FF FWE+ ++ ++F+ LWG Sbjct: 91 LLFAVKEIKESKDIFYIFYLLVYLSVISVFISSNLLIFFVFWEVAVLSLFFITGLWG--- 147 Query: 162 SDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEY 221 D K AA KF ++TQ L +L A+ L+F++ TG + F+ + + S +EY Sbjct: 148 -DKKKGKKAAMKFLVFTQFGSLTLL-AVFILLFLY---TGSFNFSVIASKMSLLPSYIEY 202 Query: 222 LLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPN 281 + I +KMP+ PLHGWL D++ +P++G++ L+ +L K + + F LF N Sbjct: 203 IAFFLLLITVMIKMPIFPLHGWLLDSYYYSPSSGTMFLSSMLSKLGGFAFILFGFGLFRN 262 Query: 282 ASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGA 341 F + LGV Y A+ A Q D+K+L++Y+S+ +M + I + +G A G+ Sbjct: 263 VLIAFRLPLISLGVFTAVYIAFTASGQKDLKKLLSYSSMFYMALIFIGVSSGVNTAIAGS 322 Query: 342 VIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGT 401 ++ M++H LF + L +R T +M MGG+ SKM L +F A+LG+PG Sbjct: 323 ILLMVSHAFIITLLFGVSYILLKRTGTNEMESMGGIMSKMPILSFFLVFGIFASLGIPGL 382 Query: 402 GNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMS 461 NF GE +I GS+ V I++I+ FG++ ++ Y L ++ ++ FG+ K AS L +S Sbjct: 383 SNFPGELLIFIGSYSVAG-ISLIAIFGIMLSTNYYLRVIKQSLFGQLKKTFAS--LKDIS 439 Query: 462 LRELFMILLLVVLLVLLGFYPQPILDT 488 E+ + L ++L+G +P +L+T Sbjct: 440 RAEVITMGFLSFFILLIGLFPSLLLNT 466 >UniRef50_A4X1Y9 Proton-translocating NADH-quinone oxidoreductase, chain M n=3 Tax=Micromonosporaceae RepID=A4X1Y9_SALTO Length = 503 Score = 187 bits (475), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 167/453 (36%), Positives = 242/453 (53%), Gaps = 31/453 (6%) Query: 66 EFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCS---WKEIEKYQG-FFHLNLM 121 + D+PW+P + HL +DG+S +VVLT L + + C WK G L+ Sbjct: 73 QVDLPWVPGLDLRFHLGVDGISWPLVVLTAL--LTLLCCGYTLWKVPSGGSGRALVALLL 130 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + G++G FLA+D+ LFF F+E++L+PMY +I WG G R AA KF +YT Sbjct: 131 VVEVGILGTFLALDLVLFFVFFEVVLLPMYAIIVGWG-----GPDRYRAARKFALYT--- 182 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLN-TPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 +L ++L LV V T T + L T +S G + +AFAVK P+ PL Sbjct: 183 ---LLGSVLLLVGVMVVVTAAGTADIVALTGGTGLSRGPQLAAFTLLALAFAVKSPLWPL 239 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H WLPDAH+QAPT GSV LAG+LLK YGL+R ++ + P + AP+ L V I Sbjct: 240 HSWLPDAHTQAPTVGSVILAGVLLKMGTYGLIRVAVGVAPEGAEWAAPVLGVLAVAAILV 299 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 G+ + AQT++KRLIAY+SV HMGFVL+ + T + + A+I IAHG+ LF L G Sbjct: 300 GSLVCLAQTELKRLIAYSSVGHMGFVLLGVATLTGTGLRAALIGNIAHGVITGLLFFLAG 359 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGE-FMILFGSFQVVP 419 + +R HT D+ + GL L L F AVA+LG+PG F GE F ++ P Sbjct: 360 AVKDRAHTGDLADLSGLRETAPRLAGLLGFAAVASLGLPGLAGFWGEAFAVIAAVRAGGP 419 Query: 420 V---ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLV 476 + + ++ G + Y L +L + G A S +A + PG++ EL LV+L + Sbjct: 420 LWLTLAALAALGGALTAAYLLRLLRQVTHGPASSAVA-RVGPGVARAELLTWAPLVLLTL 478 Query: 477 LLGFYPQPILDTSHSAIGNIQQWFVNSVTTTRP 509 +G P +L + Q V+++ T RP Sbjct: 479 AVGLAPILVL--------GVAQAPVDALLTGRP 503 >UniRef50_UPI000038E626 NADH dehydrogenase subunit M n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E626 Length = 498 Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 132/437 (30%), Positives = 223/437 (51%), Gaps = 30/437 (6%) Query: 77 ISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDM 136 I+ L + G S L+V++ L+ + ++L K + +F+ M G+ G+F+ + Sbjct: 74 INFSLGLTGFSDLLVIIALLITMFSILMGSKS---HGAYFYGLFMAAGFGLAGLFMVRNF 130 Query: 137 FLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVH 196 F+ FWE++L+P++F+I +G + ++ KFFIYT L +L++I L + Sbjct: 131 LFFYIFWEVVLIPVFFIIGKYGTGNKE-----KSSLKFFIYTHIGSLFLLLSIFTLSTYY 185 Query: 197 YNATGVWTFNYEELLNTPMSSGVE----YLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAP 252 + T ++TF +L+N G+ Y ++ GF +AF +K+P PLH WLPDA+ AP Sbjct: 186 FLKTSIFTFQIGDLMNVAFIIGIPTYAFYFILFGFLLAFLIKLPTFPLHVWLPDAYYDAP 245 Query: 253 TAGSVDLAGILLKTAAYGLLRFSLP---LFPNASAEFAPIAMWLGVIGIFYGAWMAFAQT 309 +G++ L+G L+ YGLL P LFP F ++LG+I I Y A+ A Q Sbjct: 246 YSGTIMLSGGLVAMGGYGLLGILYPIAGLFPKYLVYF---IIFLGLISIIYFAFSALFQP 302 Query: 310 DIKRLIAYTSVSHMGFVLIAIYTG-------SQLAYQGAVIQMIAHGLSAAGLFILCGQL 362 D+KR+ AY S + M F+ IA T L G + Q+IAH AA +F + Sbjct: 303 DLKRMAAYGSAAEMSFITIAFGTALLSTGYVRTLDLAGGMYQIIAHTFVAALIFASLSLV 362 Query: 363 YERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVIT 422 Y+R T + +GGL ++ L + L +A+LG+P F+GEF + +FQ + + T Sbjct: 363 YKRTGTSRIYELGGLNRELPILSSFLLVGMLASLGLPSLAGFIGEFSVTISAFQSIGLYT 422 Query: 423 VISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYP 482 + GL+ + + + R FG ++ L ++ +E ++ ++V + LG YP Sbjct: 423 LFIVLGLIVIAAFLIWAAQRTIFGYFNERLG--RLRDVNKQEFLILFFIMVCTIFLGVYP 480 Query: 483 Q---PILDTSHSAIGNI 496 IL S +G + Sbjct: 481 TLFFKILTAYASHLGGL 497 >UniRef50_C1XXS8 NADH dehydrogenase subunit M n=2 Tax=Meiothermus RepID=C1XXS8_9DEIN Length = 474 Score = 183 bits (464), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 116/358 (32%), Positives = 184/358 (51%), Gaps = 14/358 (3%) Query: 126 GVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVM 185 G++G+F A+D+ LF+ F+E L+P ++ L+G G+ R+ A F ++T L M Sbjct: 110 GLLGIFAALDLVLFYVFFEFTLIPALLMLGLYG-----GRERMRALYTFALFTLVGSLPM 164 Query: 186 LIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLP 245 L AILA F+ G +F +L N P+ + LGFF A AVK P+ PLH WLP Sbjct: 165 LAAILAARFLG----GAESFLIGDLYNHPLKGVAASWVFLGFFFALAVKTPLFPLHAWLP 220 Query: 246 DAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMA 305 H + +G D G L K + R+++PL P P+ + L Y AW A Sbjct: 221 SFHQENHPSGLADAMGTLYKVGIFAFFRWAMPLAPEGFQGLQPLLLTLAAFTAIYAAWAA 280 Query: 306 FAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYER 365 + D K L+AY +SHMG I +++G+ GA+ + A + G+F+ G LYER Sbjct: 281 WGAKDWKNLLAYGGISHMGLAAIGLFSGTSEGAVGALFLLGASFVYTGGMFLFTGLLYER 340 Query: 366 IHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVIS 425 T ++ + GL L AL + ++ +G+PG F GEFM L G+++ P +T ++ Sbjct: 341 TGTLEIGPVRGLAKSAPALAALGMILVMSMIGLPGLAGFPGEFMALLGAYKASPWLTFVA 400 Query: 426 TFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQ 483 F SV + A + K + ++ +P M+L+E +++V + LLG YP+ Sbjct: 401 -----FLSVIAAAAYALTAYQKVFHESENRAVPDMTLQEWSFAVVIVAAIALLGLYPK 453 >UniRef50_D2QWL0 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QWL0_9PLAN Length = 703 Score = 182 bits (461), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 101/278 (36%), Positives = 151/278 (54%), Gaps = 12/278 (4%) Query: 228 FIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFA 287 FI F +K+P VP H WLPDAH +APT S+ LAG+LLK YG++R P+ P E Sbjct: 374 FIGFIIKVPSVPFHTWLPDAHVEAPTPISMILAGVLLKMGGYGIIRICYPICPAGGYELM 433 Query: 288 PIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAI----------YTGS--Q 335 + LGV+ + YGA+ A AQ D KR++AY+SVSHMG+V + + Y Sbjct: 434 YLVCTLGVVSMVYGAFAALAQKDFKRMVAYSSVSHMGYVTLGLGVWSATAGNYYNADYWN 493 Query: 336 LAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVAT 395 + QGA+ QMI HG+S+AG+F + G +Y+R+H R++ GGL+ KM A+++ A Sbjct: 494 MGVQGAMFQMIGHGVSSAGMFFMVGIIYDRVHHRNLEEFGGLFGKMPVYTAMAMGLFFAA 553 Query: 396 LGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQ 455 LG+PG F GE ++ ++ V+ V S ++ + Y L + R Y G Sbjct: 554 LGLPGLCGFPGEVFVVLSVWKFSMVLAVFSASVVILTAAYILWAMQRVYLGAEYKGPHGD 613 Query: 456 ELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAI 493 L +LRE + L+V ++ G +P +L I Sbjct: 614 HLHPTNLRENMIGFTLLVFAIIFGVFPYTVLQYMEKTI 651 Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 75/203 (36%), Positives = 116/203 (57%), Gaps = 16/203 (7%) Query: 28 PRWIALITMGLTLAL----SLQLWLQGGYSLTQSAGIPQ--WQSEFDMPWIPRFGISIHL 81 P I +T+G+T+A+ L L G+ + + Q QS F++ WIP F I + Sbjct: 31 PDLIRFVTLGVTIAVLILTVLGLMDPLGWQASTKFDVAQAEMQSAFNVAWIPSFDIEYFM 90 Query: 82 AIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFF 141 +DG+S +V+LT + VLA+ SW + +G+ L L+ + G++GVFLA+D FLF+ Sbjct: 91 GMDGISFPLVMLTAFVSVLAMGASWSITKAVKGYCILFLL-LETGMLGVFLALDFFLFYV 149 Query: 142 FWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATG 201 FWE+ML+PMYFLI +WG G + AA KFF+YT A ++ML+AIL L F ++ Sbjct: 150 FWEVMLLPMYFLIGVWG-----GPRKEYAAIKFFLYTLAGSVLMLVAILMLYF----SSD 200 Query: 202 VWTFNYEELLNTPMSSGVEYLLM 224 + + E L +P + + M Sbjct: 201 LRVLSDEYLAGSPADRPIRWSEM 223 >UniRef50_Q9B6D6 NADH-ubiquinone oxidoreductase chain 4 n=4 Tax=Saccharomycetales RepID=NU4M_YARLI Length = 486 Score = 181 bits (460), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 135/419 (32%), Positives = 222/419 (52%), Gaps = 24/419 (5%) Query: 83 IDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGV-----FLAIDMF 137 IDGLSL ++LT LL L +L +W I F+ NL + L IG+ F A+D Sbjct: 81 IDGLSLTFILLTVLLIPLTLLGNWYNIN-----FNSNLYYTLVLAIGLVILLNFWALDYI 135 Query: 138 LFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHY 197 F+ +E L ++ LI ++G S+ A+ ++T + L ML++I+ + V Sbjct: 136 SFYILFEATLPLLFILIHIYGSSDSE-----RASFYVLMFTLSGSLFMLLSIVVISIV-L 189 Query: 198 NATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSV 257 N T N L S ++ ++ LG FIA VK P+ P+H WLP HS++P AGS+ Sbjct: 190 NTTNFINHNLFVL-----SLDLQTIIWLGLFIAIMVKTPLFPIHVWLPVVHSESPLAGSM 244 Query: 258 DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAY 317 LAG++LK A Y +LR LPL A + P+ + ++ I + Q D+K +IAY Sbjct: 245 ILAGLILKLALYAILRLLLPLLCEAQILYTPMIYIISLLTIILTSLATLRQIDLKVIIAY 304 Query: 318 TSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ-LYERIHTRDMRMMGG 376 +S+SHMG ++ + + + L G+++ +AHG + LF++ G LY+R H R + G Sbjct: 305 SSISHMGIAILGVCSNTSLGIYGSIVLGVAHGFVSPALFLIVGGILYDRYHIRIVNYYKG 364 Query: 377 LWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYS 436 L + M L + + A +G P TGNF GEF+ L G F P+I IS ++ A++Y Sbjct: 365 LTTYMPQLATYIIILSFANIGTPLTGNFTGEFLSLQGGFIRNPIIGGISCISVLLAAIYQ 424 Query: 437 LAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGN 495 L + ++ G S I +++RE F++ +L++ +++G PQ + + + + N Sbjct: 425 LKLTNKLTGG--ISSIYMHRTNDVTIREKFIMNILIISTLIIGICPQIMYNLLYWTVNN 481 >UniRef50_B3DZT1 NADH dehydrogenase subunit M n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DZT1_METI4 Length = 488 Score = 181 bits (459), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 141/473 (29%), Positives = 244/473 (51%), Gaps = 27/473 (5%) Query: 26 KVP-RWIALITMGLTLALSLQLWLQ-----GGYSLTQSAGIPQWQSEFDMPWIPRFGISI 79 +VP R AL L SL L+ Q GY Q +W +P +P I Sbjct: 21 RVPARQAALWASLLNFLASLWLYFQYDPHLSGYQFVQDN---RW---IQLPALPE--IHY 72 Query: 80 HLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLF 139 H+ +DG++L +V+LT ++ + AV+ S + I++ F+ L+ I G +G F+++D+F F Sbjct: 73 HVGVDGINLPLVLLTTVVTLAAVIVSPRGIKREPEFYS-YLLAISLGALGAFVSLDLFFF 131 Query: 140 FFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNA 199 + F E LVP + LI +WG + R + + +Y +++L+ ILAL+ + Sbjct: 132 YIFHEFALVPTFLLIGIWG-----SENRQFVSLQITLYLIVGSMILLVGILALLVL--LP 184 Query: 200 TGVWTFNYEELLN----TPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAG 255 TF+ L++ P+ E L + F + + P + W P ++ APT Sbjct: 185 PEARTFDIPTLVDYVRLHPLPIMKEPLAFGFLLVGFGTLVSLFPFYTWAPSGYAVAPTPA 244 Query: 256 SVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLI 315 ++ AG+L K YGLLR ++PL P + + L + I Y ++ AQ ++ ++ Sbjct: 245 AMLHAGVLKKFGLYGLLRLAIPLLPGGLEHWKALLYALLLGNILYIGYVTIAQKELTTML 304 Query: 316 AYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMG 375 Y+SV HMG++ + + T + + G V+ M+AHGLS A LF L G++ ++ +G Sbjct: 305 GYSSVMHMGYLFLGLATWNTIGLSGVVLLMVAHGLSIALLFALAGEIKDKTGEIKFSELG 364 Query: 376 GLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVY 435 GL +M ++ + + A++G+PG NF GE +I FGS++V P IT ++ +G+V ++VY Sbjct: 365 GLGQRMPFVSVAFILASFASIGVPGLANFAGELLIFFGSWKVQPWITALAIWGIVISAVY 424 Query: 436 SLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDT 488 L + +FGK + E +R+ F LLL+ L+++G P +L Sbjct: 425 QLRAVQSVFFGKLPPHLKEVEDVQGIMRK-FPYLLLMSFLLIIGMMPGSLLSV 476 >UniRef50_B4CV23 Proton-translocating NADH-quinone oxidoreductase, chain M n=2 Tax=Verrucomicrobia RepID=B4CV23_9BACT Length = 489 Score = 180 bits (457), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 142/430 (33%), Positives = 219/430 (50%), Gaps = 22/430 (5%) Query: 46 LWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCS 105 L L G S ++AG Q+QS P +P + ++ + DGLSL+M++LTG++ + AV + Sbjct: 36 LTLFGFLSYNKAAGGFQFQS--ITPIVPEWKLNYAVGADGLSLVMLLLTGIVTLAAVWVT 93 Query: 106 WKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGK 165 K IEK + F+ L++I G G F + D+F F+ F E+ L+P + LI LWG+ Sbjct: 94 PK-IEKRENLFYACLLFISAGAAGAFASTDLFFFYSFHELALIPTFLLIGLWGYG----- 147 Query: 166 TRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELL----NTPMSSGVEY 221 R TAA K IY +++LI ++ L A+ TF+ EL N + + + Sbjct: 148 ERYTAAWKITIYLGLGSIILLIGLVDLYLAVPAAS--RTFSLIELQRLAGNGLIPAAAQS 205 Query: 222 LLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPN 281 L I F + + + P H W P A+S APT ++ AG+L K YGL+R +LPL P Sbjct: 206 RPYLFLLIGFGILISLFPFHSWAPPAYSSAPTPVAMLHAGVLKKFGLYGLIRIALPLLPE 265 Query: 282 ASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGA 341 + +A + + L V I Y + AQ + L+ Y+SV HMG++ + I + + GA Sbjct: 266 GAKVWASLLLILLVGNIIYIGLVTIAQKKLDLLLGYSSVMHMGYIFLGIAALNIVGVSGA 325 Query: 342 VIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGT 401 + M AHGLS A LF L G L +R + GG+ W+ + A A++G+PG Sbjct: 326 ALLMFAHGLSIAALFALAGFLRQRNPLLLLESFGGVAKSAPWMGFVFGLAAFASIGLPGF 385 Query: 402 GNFVGEFMILFGSFQVVP--------VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIA 453 NF E + FG+F+ P + TV + +G+V ++VY L + G A Sbjct: 386 ANFASEVNVFFGAFKPGPGLVAPNFQLATVFALWGVVISAVYMLRAYRAIFLGAPGKDSA 445 Query: 454 SQELPGMSLR 463 P SLR Sbjct: 446 EYVDPIKSLR 455 >UniRef50_Q6L0I8 NADH-quinone oxidoreductase chain M n=1 Tax=Picrophilus torridus RepID=Q6L0I8_PICTO Length = 493 Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 128/436 (29%), Positives = 224/436 (51%), Gaps = 38/436 (8%) Query: 74 RFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILG-GVIGVFL 132 F I++ + G + +++++ ++ + A++ S + G L+ I G G+ G F Sbjct: 71 SFYITLSFGLTGFTDALIIMSMVVTLFALMISDYNNPSFYG-----LIMITGFGLSGFFA 125 Query: 133 AIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILAL 192 +++ F+ FWE++++PM+ +I+ +G G + + KFFIYT L +L++I L Sbjct: 126 SMNFLFFYVFWEVVIIPMFIIISRYG-----GNNKRLISLKFFIYTHLGSLFLLLSIFTL 180 Query: 193 VFVHYNATGVWTFNYEELLNTPMSSGVE----YLLMLGFFIAFAVKMPVVPLHGWLPDAH 248 ++ T V TF L+N + Y ++ GF AF +K+P PLH WLP+AH Sbjct: 181 SGYYFIETNVLTFQIHTLMNPYFQRTIPRAGYYFIIFGFLAAFLIKLPAFPLHEWLPNAH 240 Query: 249 SQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWL----GVIGIFYGAWM 304 AP GS+ L+G LL YGLL P+ S F I +++ G+IGI Y + Sbjct: 241 YTAPFPGSIMLSGGLLSMGGYGLLGILYPV----SVLFPKILIYILISTGIIGIVYFSLT 296 Query: 305 AFAQTDIKRLIAYTSVSHMGFVLIAIYTG-------SQLAYQGAVIQMIAHGLSAAGLFI 357 + QT++KR+IAY+S + M FVL++ T L G + Q +AH + F Sbjct: 297 SMFQTNLKRMIAYSSAAEMSFVLVSFGTSVISSGYPRVLDLSGGMYQTVAHSFVISLAFA 356 Query: 358 LCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAV---ATLGMPGTGNFVGEFMILFGS 414 +Y+R T + +GG+ + +P S FF + A+ G+P F+GEF I+ GS Sbjct: 357 SLFYIYKRTGTLQIYGLGGI---QRNIPMASSFFMISMLASFGVPALAGFIGEFSIIVGS 413 Query: 415 FQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVL 474 + + ++T+I GL+ A+ Y L R+ +G + +L ++ E ++L ++++ Sbjct: 414 YYSIGLLTLIIVAGLMIATGYFLWAAQRSLYGIYNENLG--KLNDLNGYEFLILLTMLLV 471 Query: 475 LVLLGFYPQPILDTSH 490 + G YP+P+ H Sbjct: 472 SIFFGIYPEPVFGIMH 487 >UniRef50_B5IHV8 Proton-translocating NADH-quinone oxidoreductase, chain m n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IHV8_9CHRO Length = 517 Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 136/407 (33%), Positives = 219/407 (53%), Gaps = 21/407 (5%) Query: 90 MVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVP 149 ++VLT LL L+VL S + + +F L L LG ++G FLA + LF +E++L+P Sbjct: 78 LMVLTSLLTALSVLASPVNQSRPRLYFALILATNLG-LVGAFLATNALLFLLAFELVLIP 136 Query: 150 MYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILAL----------VFVHYNA 199 L+A WG + R AA ++ +Y SGL +L +LA+ + + + Sbjct: 137 TTLLVATWGKE-----RRAAAAVRYLLYGAVSGLALLAGVLAIGWYSAQSPSGIAMASDG 191 Query: 200 TGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDL 259 + + F+Y+ L + SGV +++ ++F +K+PVVPLHGW P ++++AP + L Sbjct: 192 SALTLFSYQTLEAAEIPSGVGTVILGLLVLSFGLKLPVVPLHGWQPISYAEAPIPVVMLL 251 Query: 260 AGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTS 319 +G + K AAYGLLRF + P A A +P + I YGA A AQTDI+RL+AY+S Sbjct: 252 SGAVSKLAAYGLLRFGVGFLPEAWANLSPWIAAIAAISAVYGAMTAIAQTDIRRLMAYSS 311 Query: 320 VSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWS 379 + HMG + +A+ + L+ QGAV Q+IAHGL +A LF G + + T + + GL + Sbjct: 312 LGHMGLLTLALAAATPLSLQGAVAQVIAHGLISALLFSCVGLIERKTGTTAIPDLSGLMN 371 Query: 380 KMKWLP---ALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYS 436 ++ LP + L +A G+PG F E ++ GS+ P T++ F +VY+ Sbjct: 372 PIRGLPFTMGMLLLALMAAAGIPGLAGFPAELLVFEGSWLTFPRATLVCLVASGFTAVYA 431 Query: 437 LAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQ 483 + + +R FG+ + A + R M+L +VLL G +P Sbjct: 432 VRLFNRVGFGRLDNARADWQATTWGERAPAMVLTTLVLLA--GIWPS 476 >UniRef50_B5YL24 NADH-quinone oxidoreductase chain m, putative n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YL24_THEYD Length = 479 Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 141/454 (31%), Positives = 231/454 (50%), Gaps = 29/454 (6%) Query: 6 LILI-PFIGGFLCWQTERFGV-KVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQW 63 LILI P +G FL W + G+ K+ IAL++ L+ ++L +L + ++ Q+ Sbjct: 6 LILIFPLLGAFLIW---KIGIRKIVNLIALMSSSLSFIMALIYYL----NFDRTKKGFQF 58 Query: 64 QSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWI 123 + ++ WI + ++ L D ++ V+LT + + +L + K I+ F L+ + Sbjct: 59 LTSYE--WISAWQLNFTLGFDHINSPFVLLTTFITLAIILLATKTIKDKISSFMSLLLLL 116 Query: 124 LGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGL 183 V F++ + FFFF+E ML+P LI WG G+ A+ KF IYT + Sbjct: 117 SVSVNAFFMSTNFLQFFFFYEAMLIPAVLLIQRWG-----GENSFQASIKFLIYTFGFSI 171 Query: 184 VMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGW 243 + +AI+A Y G +F++ L N +S + LL+ GF +AF VK+P+VPLHGW Sbjct: 172 FLFLAIIA----TYYYGG--SFSFTSLENLKISETAKLLLLFGFILAFFVKIPIVPLHGW 225 Query: 244 LPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAW 303 L DA+ +A ++ L+ +L K YG+LR +P F + + + +I Y A+ Sbjct: 226 LKDAYYEAAMPVTIFLSAVLGKMGIYGILR-VIPYFNDILSVVNQWIILTCLISFVYSAF 284 Query: 304 MAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLY 363 +A +IK L AY S+SH+G + +TG+ YQG ++Q I HG+ AA LF + L Sbjct: 285 LALNSKNIKVLFAYMSLSHVGIITAGAFTGNLQGYQGVLLQSINHGILAAALFYVAELLN 344 Query: 364 ERIHTRDMRMMGGLWSKMKWLPALSLF---FAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 + D+ G L K +PAL+ F +A G PG F GE ++L G F+ Sbjct: 345 RETKSFDLEKFGAL---SKRVPALTFFTFSLIMAMGGFPGLNYFNGELLLLSGIFRENLF 401 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIAS 454 + I FG+ VY +R Y K +++++ Sbjct: 402 LGFIGVFGVALGVVYLSWFFYRVYLRKPGAELST 435 >UniRef50_Q56228 NADH-quinone oxidoreductase subunit 13 n=3 Tax=Thermus RepID=NQO13_THET8 Length = 469 Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 131/423 (30%), Positives = 217/423 (51%), Gaps = 29/423 (6%) Query: 33 LITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLS---LL 89 ++ GL+ L+L L+L T G+ F P +P G+ +DGLS L Sbjct: 26 VLGAGLSFLLNLYLFL------THPGGVAH---AFQAPLLPGAGVYWAFGLDGLSALFFL 76 Query: 90 MVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVP 149 + LT LG L + + +G F + + G ++G+F A D+ +F+ F+E L+P Sbjct: 77 TIALTVFLGAL--------VARVEGRFLGLALLMEGLLLGLFAARDLLVFYVFFEAALIP 128 Query: 150 MYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEE 209 ++ L+G +G+TR A F ++T L ML A+L + +G TF E+ Sbjct: 129 ALLMLYLYG---GEGRTR--ALYTFVLFTLVGSLPMLAAVLGARLL----SGSPTFLLED 179 Query: 210 LLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAY 269 LL P+ + + LGF +AFA+K P+ PLH WLP H + +G D G L K + Sbjct: 180 LLAHPLQEEAAFWVFLGFALAFAIKTPLFPLHAWLPPFHQENHPSGLADALGTLYKVGVF 239 Query: 270 GLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIA 329 RF++PL P A+ + ++L + YGAW+AFA D K L+AY +SHMG + Sbjct: 240 AFFRFAIPLAPEGFAQAQGLLLFLAALSALYGAWVAFAAKDFKTLLAYAGLSHMGVAALG 299 Query: 330 IYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSL 389 +++G+ G + + A G+ GLF+L G+LYER T ++ GL L AL+L Sbjct: 300 VFSGTPEGAMGGLYLLAASGVYTGGLFLLAGRLYERTGTLEIGRYRGLAQSAPGLAALAL 359 Query: 390 FFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAK 449 +A +G+PG F GEF+ L G+++ P + ++ ++ ++ Y+L + ++ + Sbjct: 360 ILFLAMVGLPGLSGFPGEFLTLLGAYKASPWLAALAFLSVIASAAYALTAFQKTFWEEGG 419 Query: 450 SQI 452 S + Sbjct: 420 SGV 422 >UniRef50_A6TVL4 NADH dehydrogenase (Quinone) n=2 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TVL4_ALKMQ Length = 694 Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 134/434 (30%), Positives = 215/434 (49%), Gaps = 57/434 (13%) Query: 3 LPWL-ILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LP L I+IP +GG + + + + T +TL L L ++ Q + Sbjct: 89 LPLLVIMIPLVGGPIEAYIGKKSENLRDMAVVDTTFVTLLLVLAMYPQ----------VA 138 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCS--WKEIEKYQGFFHLN 119 Q + + +P + +G+S +D LS +M G+L L + + + IE ++ F+L Sbjct: 139 QGEMYYHLPKLLGYGLS--FKVDMLSFIMAATAGVLWFLVSIYAHDYMGIENHRNRFYLW 196 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 + GG++G +A D+F F F+E+M YFL+A H S K I A + Sbjct: 197 MSVTFGGILGTVMAGDLFTMFLFFEIMTFSSYFLVA---HNQS--KESILAGNSYIYMGV 251 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYL-----LMLGFFIA-FAV 233 A GL +L+ ++ L Y TG F P++S ++ L LM G F+ F + Sbjct: 252 AGGLSILLGMILL----YAYTGTLEF-------IPLASEIKDLGWVKYLMTGLFVGGFGI 300 Query: 234 KMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFP------------- 280 K ++PLH WLP AH APT S L+GIL+K AYG+LR S+ F Sbjct: 301 KAGMLPLHIWLPKAHPVAPTPASALLSGILIKVGAYGILRVSISFFVPSITEISGYADSL 360 Query: 281 -NASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQ 339 S + + +W+G+I + G +MA Q+++K+++AY S+S MG++++ I + L Y+ Sbjct: 361 WEVSQKLGAVIIWIGIITMVVGVFMALQQSNMKKMLAYHSISQMGYIVMGIGVATYLGYK 420 Query: 340 GA------VIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAV 393 GA + M+ H L A LF++ G +Y R H DM +GG+W KM + L + A+ Sbjct: 421 GAMGFSGGIYHMVNHALFKALLFMVVGLVYLRTHELDMYKLGGMWRKMPFTAFLCIIAAL 480 Query: 394 ATLGMPGTGNFVGE 407 GMPG F + Sbjct: 481 GITGMPGFNGFASK 494 >UniRef50_A6YHK2 NADH-ubiquinone oxidoreductase chain 4 n=3 Tax=Hexasterophora RepID=A6YHK2_9METZ Length = 472 Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 139/410 (33%), Positives = 227/410 (55%), Gaps = 11/410 (2%) Query: 77 ISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDM 136 IS L ID LS +++ LT LL + ++L S K I L L L + F + Sbjct: 74 ISTRLTIDTLSTILMTLTALLILTSLLISEKTIYHTHTTLMLCLFTTLLILFLAFTTSSL 133 Query: 137 FLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVH 196 F+ +E ++P+ +I LWG + K +I A F +YT L + IAIL L Sbjct: 134 INFYITFESSVIPLIIIIGLWGSR----KEKIRATYYFLLYTITGSLPLFIAILIL---- 185 Query: 197 YNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGS 256 +N TG TFN + + + + LL LG F+AFA+K P++P H WLP AH +AP GS Sbjct: 186 HNKTG--TFNATLIQHQTIDQQPQLLLFLGLFLAFAIKTPLIPWHAWLPLAHVEAPAIGS 243 Query: 257 VDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIA 316 + LAGILLK YG +RF++P+ + + API + + +I ++ + + Q DIKR+IA Sbjct: 244 ILLAGILLKLGTYGFIRFTIPILTHTTTFIAPIIITISIISMWLASLNSLRQNDIKRIIA 303 Query: 317 YTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGG 376 Y+S++HMG + A ++ + ++ +GA+I MI+HGL+++ LF+L LYER +R ++ G Sbjct: 304 YSSIAHMGIITAACFSTNHISTKGAIILMISHGLTSSTLFLLVSCLYERHKSRLLKSFQG 363 Query: 377 LWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYS 436 L +L++ A+A + PGT NF+GE++ L G +++ P I++IS ++ + Y Sbjct: 364 SSYTTPTLSSLTIIAALAHMSTPGTTNFIGEYLCLVGLWELHPSISIISIASIIITTAY- 422 Query: 437 LAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPIL 486 L +L+ ++ +S +E+ L L + +G P PI+ Sbjct: 423 LLLLYIQITSSKPPIYTKYKIQDLSRQEIQATLTLTTPNIAIGIIPYPII 472 >UniRef50_Q979N1 NADH dehydrogenase I chain K n=2 Tax=Thermoplasma RepID=Q979N1_THEVO Length = 516 Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 125/434 (28%), Positives = 220/434 (50%), Gaps = 23/434 (5%) Query: 65 SEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWIL 124 S + + G+S +A+ GL+ +++L+ ++ ++AVL + + FF L M +L Sbjct: 56 SRYSVVISSSLGLSFSIAVSGLTDALLILSAVVILIAVLITDRNYG--SAFFGLE-MTVL 112 Query: 125 GGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLV 184 G+IG+ ++ D F+ FWE++L+P+YF+I +G + + + KFF+YT + Sbjct: 113 AGLIGLLISRDFLFFYIFWEVVLIPVYFMIGRYGIGNKN-----SISLKFFVYTHIGSVF 167 Query: 185 MLIAILALVFVHYNATGVWTFNYEELLNT--PMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 +L++I L Y TF L++ +S + ++ GF F VKMP P+H Sbjct: 168 ILLSIFTLYSQSYVYLASPTFEIGPLMSILPKLSLFYKGFVIFGFLFGFLVKMPSFPIHS 227 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGA 302 WLPD++ AP GSV LAG + YGL + + + + LG+I + Y A Sbjct: 228 WLPDSYYSAPYPGSVILAGAISMMGGYGLFGIMIESYKALDVYVLYLLIALGIISLIYFA 287 Query: 303 WMAFAQTDIKRLIAYTSVSHMGFVLIAI-----------YTGSQLAYQGAVIQMIAHGLS 351 A Q +IK+++A+ S S MGFV I+ Y+ L G + Q++AHGL Sbjct: 288 LTAMFQRNIKKMMAFASASAMGFVTISFAASILETSGIDYSVRALEAAGGMFQIVAHGLI 347 Query: 352 AAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMIL 411 + +F + T + +GG++ + L +L+L +A+LG+PG F+GEF I+ Sbjct: 348 MSLVFSALYYISRNTKTDSVYGLGGIYREAPKLASLTLVGLLASLGLPGFAGFIGEFSIV 407 Query: 412 FGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLL 471 G FQ V + FG++ + Y + R+ +G + + ++ E +++ L Sbjct: 408 VGVFQTVSWYIFLIIFGMIITASYHIWTAQRSLYGPYNENLG--FIRDINSGEFMILIFL 465 Query: 472 VVLLVLLGFYPQPI 485 V+++ +LG YP I Sbjct: 466 VLVIFVLGIYPNLI 479 >UniRef50_C6NSN3 NADH dehydrogenase I, M subunit n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NSN3_9GAMM Length = 484 Score = 172 bits (435), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 117/365 (32%), Positives = 194/365 (53%), Gaps = 8/365 (2%) Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 ++G ++G F + + F+ F+E++ + ++I + G AA +F +YT Sbjct: 105 LVGALMGTFFSQNFLGFYLFYEIVALSGAWMILI------SGDRDRAAALRFLLYTVGGS 158 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSG-VEYLLMLGFFIAFAVKMPVVPLH 241 L++L+A+L + + +A G++TF++ L P G V L L AVK+PV PLH Sbjct: 159 LLLLLAVLYIYLDNGSANGIYTFSWTGLAAVPRPEGAVAPWLFLAMLAGLAVKLPVFPLH 218 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 W A+ +A A S+ L+G + AYGL+ +++PL P + +FAP + G +G Y Sbjct: 219 SWAGPAYGRAAPAASMLLSGAAVLAGAYGLIHWAIPLLPQGALQFAPYGILTGAVGTLYA 278 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 A++A +++R A+ SVSHM V + ++ + A GA+ ++AH L A GLF + Sbjct: 279 AFLALDAPNLRRFAAWASVSHMNLVALGLFALQEQALHGALFLLVAHALLAVGLFGVIAI 338 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 L R +GGL+ + L A +LFF + +G+PG NF GEF+ L G+F+V P Sbjct: 339 LEARGLPGHWDGLGGLFRQTPRLGAWTLFFFLTGMGLPGLANFPGEFLSLAGAFRVSPWP 398 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 I+ FG++ + + L R G I + + +S EL M+ L +L + LG Sbjct: 399 AAIAAFGILLSVIVFLRAYERVMLGPLNPGI-PRGIGDLSGGELTMMWALGILCLWLGLD 457 Query: 482 PQPIL 486 PQP+L Sbjct: 458 PQPVL 462 >UniRef50_P03905 NADH-ubiquinone oxidoreductase chain 4 n=7832 Tax=Coelomata RepID=NU4M_HUMAN Length = 459 Score = 171 bits (434), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 123/368 (33%), Positives = 196/368 (53%), Gaps = 26/368 (7%) Query: 126 GVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVM 185 +I F A ++ +F+ F+E L+P +I WG++ R+ A T F YT L + Sbjct: 105 SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPE----RLNAGTYFLFYTLVGSLPL 160 Query: 186 LIAILALVFVHYNATG-----VWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 LIA L++ H N G + T +EL N S L+ L + +AF VKMP+ L Sbjct: 161 LIA---LIYTH-NTLGSLNILLLTLTAQELSN----SWANNLMWLAYTMAFMVKMPLYGL 212 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSL---PLFPNASAEFAPIAMWLGVIG 297 H WLP AH +AP AGS+ LA +LLK YG++R +L PL + + F +++W G Sbjct: 213 HLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLW----G 268 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 + + + QTD+K LIAY+S+SHM V+ AI + ++ GAVI MIAHGL+++ LF Sbjct: 269 MIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFC 328 Query: 358 LCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV 417 L YER H+R M + GL + + + L ++A L +P T N +GE +L +F Sbjct: 329 LANSNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSW 388 Query: 418 VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVL 477 + +++ ++ ++YSL M +G I + + P + RE ++ + + ++L Sbjct: 389 SNITLLLTGLNMLVTALYSLYMFTTTQWGSLTHHINNMK-PSFT-RENTLMFMHLSPILL 446 Query: 478 LGFYPQPI 485 L P I Sbjct: 447 LSLNPDII 454 >UniRef50_A8A9X5 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A9X5_IGNH4 Length = 496 Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 120/365 (32%), Positives = 185/365 (50%), Gaps = 31/365 (8%) Query: 57 SAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFF 116 S GI + + +P + G + +D LS L + +T L+ + + EIE+ + Sbjct: 50 SGGI--YSESYVIPGLHAIGADLTFRVDALSSLFLAITALIFIAVAWAASWEIEERPRLY 107 Query: 117 HLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFI 176 ++ +IGVF ++F F+ FWE L+PM+ I WG G+ ++ AA KFF+ Sbjct: 108 LALMLASEAALIGVFATWNLFWFYLFWEFTLLPMFIHILYWG-----GERKVYAAYKFFV 162 Query: 177 YTQASGLVMLIAILALVFVHYNATGVWTFNYEE----LLNTP--MSSGVEYLLMLGFFIA 230 YTQ GL++L+AI AL +++ G TF++ E L P + +L +L FFI Sbjct: 163 YTQVGGLMLLVAI-ALGWLY----GANTFDFTEFAASLAVAPDWVKVAFAWLTLLSFFI- 216 Query: 231 FAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAP-I 289 KMPV P H WLP AH +AP+ SV LA ++LK Y +R +L + P P I Sbjct: 217 ---KMPVPPFHTWLPAAHVEAPSPSSVILASLMLKMGGYAFIRITLGMAPYVLMGALPFI 273 Query: 290 AMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLI-------AIYTGSQLAYQGAV 342 A+W + + Y + +A AQ D KR++AYTS++HM I + S L + G+V Sbjct: 274 AVWAALAAV-YASTVAIAQEDFKRVVAYTSITHMSMSTIGAAVWALGLKEASLLGFIGSV 332 Query: 343 IQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTG 402 +MI+H LF+L G + HTR + + GL L + + A G+PGT Sbjct: 333 FEMISHSFVVGALFLLSGVIKHYCHTRKIPAIRGLAFVAPILSTVIMVAIFAGFGLPGTS 392 Query: 403 NFVGE 407 + E Sbjct: 393 GYPAE 397 >UniRef50_Q12ZH4 Na+/H+ antiporter subunit n=2 Tax=Methanosarcinaceae RepID=Q12ZH4_METBU Length = 513 Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 153/514 (29%), Positives = 250/514 (48%), Gaps = 60/514 (11%) Query: 22 RFGVKVPRW----IALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGI 77 R V +W ++L M +++ L LQ+W GG + + + +W ++GI Sbjct: 27 RSNANVQKWLNVSVSLAMMLISIILLLQVW-NGGIQVYE---VGEWG---------KYGI 73 Query: 78 SIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIE------KYQGFFHLNLMWILGGVIGVF 131 L D LS MVVL+ ++ LA+L S IE Y F+L ++ G+ G F Sbjct: 74 V--LVADLLSSGMVVLSSIVSFLALLYSLDYIEGRSLNSTYHSLFNL----LVAGLNGTF 127 Query: 132 LAIDMFLFFFFWEMMLVPMY-FLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAIL 190 L D+F F F+E++L+ +IA + ++ A K+ I VMLIA+ Sbjct: 128 LTGDIFNMFVFFEILLLASCGLVIANEKGGVTKSSDKMEATFKYLILNMIGSFVMLIAVA 187 Query: 191 ALVFVHYNATGVWTFNYEEL---LNTPMSSGVE----YLLMLGFFIAFAVKMPVVPLHGW 243 +L Y G T N +L ++T ++G Y + L F + F K + P+H W Sbjct: 188 SL----YATVG--TLNMADLSVKISTMSAAGTLPWHIYAIALLFIVVFGNKAAIFPMHYW 241 Query: 244 LPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAW 303 LPD H AP+ S L+G+++K AYG+LR +F +A PI + L ++ I GA Sbjct: 242 LPDVHPTAPSPISAMLSGVMIKVGAYGILRIFFLIFRDALFLLQPIIILLALVTIIIGAV 301 Query: 304 MAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLY 363 A Q D+K+L+AY+SVS +G+V + I GS A A++ M H ++ + LF+ G + Sbjct: 302 SAVGQNDVKKLLAYSSVSQIGYVFLGIGIGSVYALAAALVYMANHAIAKSMLFLTSGGII 361 Query: 364 ERIHTRDMRMMGGLWSKMKWLPALSLFF---AVATLGMPGTGNFVGEFMILFGSFQVVPV 420 TRDMR MGG+ K P +S+ F A++ G+P G FV +F++ + Sbjct: 362 HHAGTRDMRHMGGM---NKTSPIMSIAFLIGAMSIAGLPPMGGFVAKFILFDAGLRAEYY 418 Query: 421 ITVISTFGLVFASVYSLAMLHRA----YFGKAKSQIASQELPGM--SLRELFMILLLVVL 474 I V L FA V++L + RA ++G+ + E SL I+ L L Sbjct: 419 IPV--AIALFFA-VFTLFYMFRAWLLMFWGETRDVEEYGEYSSHKPSLMIALPIVSLAAL 475 Query: 475 LVLLGFYPQPILDTSHSAIGNI--QQWFVNSVTT 506 + + G Y +P++ + + + Q ++++V T Sbjct: 476 VFIFGVYAEPLIALAQAIAEQLIDPQPYIDAVMT 509 >UniRef50_Q34949 NADH-ubiquinone oxidoreductase chain 4 n=5 Tax=Lumbricina RepID=NU4M_LUMTE Length = 452 Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 123/411 (29%), Positives = 209/411 (50%), Gaps = 19/411 (4%) Query: 80 HLAIDGLSLLMVVLTGLLGVLAVLCSWK--EIEKYQGFFHLNLMWILGGVIGVFLAIDMF 137 +++ D +S + LT + V+ +L S K + Y F NL+ +L +I FL+ ++ Sbjct: 52 YMSSDMMSFTLSALTIWVTVMMILASTKIMHLNMYPKMFMTNLVILLIILINCFLSPNLI 111 Query: 138 LFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHY 197 +F+ ++E L+P LI WG++ R A+ IYT A+ L ML+ + + V Sbjct: 112 MFYIWFEASLIPTMVLIMTWGYQPE----RSQASMYLMIYTVAASLPMLMVLCKIFIVSK 167 Query: 198 NATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSV 257 A N E ++ P S + ++L LG F VK+P+ +H WLP AH +AP AGS+ Sbjct: 168 TAMMPMFMNMEFPMDYP-SMALAWVLTLG---GFLVKLPMFTVHLWLPKAHVEAPIAGSM 223 Query: 258 DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAY 317 LA ILLK YG+LR L LF + + + + ++G + + Q+D+K LIAY Sbjct: 224 ILAAILLKLGGYGILRM-LSLFHYMAKSTSSLLSSVALVGAVSTSLICLRQSDLKSLIAY 282 Query: 318 TSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGL 377 +SV HMG ++ S +Q A+ MIAHGLS++ LF++ YE HTR + +M GL Sbjct: 283 SSVGHMGLMVAGALMSSNWGFQAALAMMIAHGLSSSALFVMANMNYELTHTRSLFLMKGL 342 Query: 378 WSKMKWLPALSL---FFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASV 434 + P L++ F + + P + N + E M++ ++ ++ F + Sbjct: 343 ---LVLAPTLTMWWFLFTASNMAAPPSINLLSEIMLITSILKMSTSAFILLGLTSFFTAA 399 Query: 435 YSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPI 485 Y L M + G + S +P +++L ++ + +V +L+ F P+ I Sbjct: 400 YCLYMYTSMHHGPL--MLTSNPIPQFKVKDLTLMTMHLVPTILIIFKPELI 448 >UniRef50_C4NCD8 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Cephus cinctus RepID=C4NCD8_9HYME Length = 451 Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 117/399 (29%), Positives = 201/399 (50%), Gaps = 20/399 (5%) Query: 75 FGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF---FHLNLMWILGGVIGVF 131 + I +D S M+ L+ + +L +L S K + KY+ F F +NLM++L ++ F Sbjct: 54 YAIYYDFGLDFFSFWMINLSIWIILLMMLASLKVV-KYKNFLFLFVVNLMFMLFFLVMSF 112 Query: 132 LAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILA 191 +++ +F+ +E L+P FLI WG++ RI A +YT LV + L Sbjct: 113 SVLNLLMFYIMFEASLIPTLFLILGWGYQIE----RIEAGMYMMLYT----LVFSLPFLL 164 Query: 192 LVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQA 251 ++F Y+ + Y + S + +M+ FF VK+P+ LHGWLP AH +A Sbjct: 165 MMFYMYHMSYSLDIEYLNIKKLNFDSFLYNFVMMIFF----VKIPMFSLHGWLPKAHVEA 220 Query: 252 PTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDI 311 P +GS+ LAG++LK YG+ R + + N + + + ++G Y + + Q D+ Sbjct: 221 PVSGSMILAGVMLKLGGYGIYRL-MFISENLMSNYMMSILVFSLVGSIYLSLVCLRQVDM 279 Query: 312 KRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDM 371 K L+AY+SV HMG V+ +++ + QGA + MI+HGL ++GLF L YER +R + Sbjct: 280 KSLVAYSSVVHMGLVIGGLFSLEIIGVQGAFLMMISHGLCSSGLFCLVNMFYERSLSRSL 339 Query: 372 RMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVF 431 + G+ S + + + + P + N + E +L + + +I L F Sbjct: 340 IINKGMLSYCSPMMMMWFLLCMGNMSAPPSLNLISEIFLLMSLLSLTKFLVIILMLFLFF 399 Query: 432 ASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILL 470 +S YSL + +GK+ + S+RE F+IL+ Sbjct: 400 SSCYSLYLYSYVCYGKS---LFLYSFTSFSVREFFLILM 435 >UniRef50_A9A3Z6 Proton-translocating NADH-quinone oxidoreductase, chain M n=4 Tax=Thaumarchaeota RepID=A9A3Z6_NITMS Length = 517 Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 114/385 (29%), Positives = 195/385 (50%), Gaps = 28/385 (7%) Query: 115 FFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKF 174 +F L L++ +G ++G ++ ++ F+ F+E+ML+P +FL+ALWG DG R F Sbjct: 139 YFALYLVFAMG-MLGTVMSTNLIEFYIFFEVMLIPGFFLVALWG----DGPRR-KIGLMF 192 Query: 175 FIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVK 234 +T A +V+L+ L + + +F++ ++ + + V + + I VK Sbjct: 193 LFWTHAGAVVLLLGFLMI------GLTIGSFDFADIKESEIPQDVVMISAIAIAIGLGVK 246 Query: 235 MPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWL- 293 + V H WLP H APT S L+ ++ AYG+ R + P+ FA +++W Sbjct: 247 LAVFMFHVWLPYVHGSAPTPISALLSPAMIGIGAYGVFRLIVEFLPST---FAELSIWFH 303 Query: 294 --GVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLS 351 G++ + YG MA Q D+KRL+AY+S+S MG++L I + S + GA + I HGL Sbjct: 304 IWGLVTMLYGGAMALMQDDLKRLLAYSSISQMGYLLFGIGSMSAMGLAGAEMMYITHGLG 363 Query: 352 AAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMIL 411 LF++ G + ++ TR + +GGL KM ++ A+ +G+P T F+GE+++ Sbjct: 364 KGILFMMAGIIIVKVGTRSISKLGGLAGKMPITAVCAVIGALTIMGVPPTSGFMGEWILF 423 Query: 412 FGSFQVV-----PVITVISTFGLVFASV---YSLAMLHRAYFGKAKSQIASQELPGMSLR 463 +G+ + + V GLV ++ Y L ML R +FGK + + + Sbjct: 424 YGALETAIEEGSTLRAVTFGLGLVATALTMAYMLWMLKRVFFGKTPEHLEKVKEGSWYMT 483 Query: 464 ELFMILLLVVLLVLLGFYPQPILDT 488 M+ L V+LG YP L T Sbjct: 484 APMMV--LAGFTVVLGIYPDIFLKT 506 >UniRef50_Q9B509 NADH-ubiquinone oxidoreductase chain 4 n=2 Tax=Arthropleona RepID=Q9B509_TETBI Length = 452 Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 120/401 (29%), Positives = 209/401 (52%), Gaps = 25/401 (6%) Query: 82 AIDGLSLLMVVLTGLLGVLAVLCSW--KEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLF 139 +D L +++L+ + +L V SW + Y+ +F ++ +L ++ FL+++M F Sbjct: 54 GVDFLGFSLIMLSFWISLLMVSSSWMINKNNYYKEYFLFLIILLLIVLMLCFLSLNMMYF 113 Query: 140 FFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVH-YN 198 +FF+E+ L+P +I WG++ R+ A F +YT + L +L+ + VH +N Sbjct: 114 YFFFEVSLIPTLLIIMGWGYQLE----RLQAGVYFMLYTLTASLPLLLNL-----VHIFN 164 Query: 199 ATGVWTFNYEELLNTP---MSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAG 255 G + Y L +++ + +++ML + F K+P+ LH WLP AH +AP G Sbjct: 165 KMGGLSM-YMSLSGFSIMYLTNVIGFVVMLTLLMTFMAKLPIFFLHLWLPKAHVEAPVGG 223 Query: 256 SVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLI 315 S+ LAG+LLK +GL RF + L + +F+ + LG++ + Y +M + D+K L+ Sbjct: 224 SMILAGVLLKLGGFGLCRF-MALSGSILLKFSGYMIGLGIMSMVYVGFMCWRLNDMKALV 282 Query: 316 AYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMG 375 AY+SVSHMG V + T + G +I M++HGLS++GLF YER+ +R M M Sbjct: 283 AYSSVSHMGLVFSGLVTLFSWGFSGGLIMMVSHGLSSSGLFCAVNMYYERVGSRSMYMNK 342 Query: 376 GLWSKMKWLPALSLFF---AVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFA 432 G M P SL F VA + P T N +GE ++ ++ ++ G Sbjct: 343 GF---MLMFPLFSLMFFMLCVANISAPPTINLMGEIFLMLSVMAFSKIMIILFPLGSFLG 399 Query: 433 SVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVV 473 +V++L + +Y KS + G+++ EL ++L +V Sbjct: 400 AVFTLFL--YSYSQHGKSYFMGKSYLGVTMNELHSLILHLV 438 >UniRef50_Q3KRR8 NADH-ubiquinone oxidoreductase chain 4 n=47 Tax=Tetrapoda RepID=Q3KRR8_9NEOB Length = 456 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 128/410 (31%), Positives = 202/410 (49%), Gaps = 23/410 (5%) Query: 83 IDGLSLLMVVLTGLLGVLAVLCSWKEIE----KYQGFFHLNLMWILGGVIGVFLAIDMFL 138 ID +S + +LT L L +L S ++ Q + N ++ + F A D+ L Sbjct: 56 IDKISAPLAILTCWLFPLTLLASQSKLSLEPINRQRIYIANNAFLQLTTLLAFTASDLML 115 Query: 139 FFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVH-- 196 FF F+E LVP +IA WG + + R+ A YT + +++ + + H Sbjct: 116 FFVFFEASLVPTMIIIARWGAQ----ERRLEAGMFIAFYTMLGAVPLILWFIDIFSTHGS 171 Query: 197 --YNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTA 254 T TF Y PM++ + ++ + +AF VK+P+ LH WLP AH +AP A Sbjct: 172 LLSTLTLTSTFTY------PMTNYPGFFWLM-YNLAFLVKLPLYCLHLWLPKAHVEAPIA 224 Query: 255 GSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF-YGAWMAFAQTDIKR 313 GS+ LAG LLK YG+LR S L N + E M + ++GI A + QTD+K Sbjct: 225 GSMVLAGTLLKLGGYGILRTS-ALLHNITIENTLFIMLIAIVGILATAALLCLRQTDLKS 283 Query: 314 LIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRM 373 LIA +SVSHM V +A +Y G +I MIAHGL+++ LF L YER ++R M + Sbjct: 284 LIAMSSVSHMNLVAVAALISPPWSYSGDMIMMIAHGLTSSALFCLANTAYERTNSRTMIL 343 Query: 374 MGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFAS 433 + G A L + + +P T NF+ E +I+ F P+ ++ L+F + Sbjct: 344 LRGAMLIFPLASAWWLAIILFNMALPPTPNFIAELLIMITLFNWSPIAFMVVVLNLIFTT 403 Query: 434 VYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQ 483 Y+L +L G + + + L +RE +++L V+ +LL P+ Sbjct: 404 AYTLYVLWSTQRGPLPTHL--KTLFPSQIREHTLLILHVIPGLLLILKPE 451 >UniRef50_P20113 NADH-ubiquinone oxidoreductase chain 4 n=8 Tax=Chlamydomonadales RepID=NU4M_CHLRE Length = 443 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 115/383 (30%), Positives = 188/383 (49%), Gaps = 29/383 (7%) Query: 80 HLA--IDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMF 137 HLA IDG++L +++LT +L + ++ + GF L+ +L V+ +D+ Sbjct: 64 HLAFGIDGVALSLMLLTTVLFPICMML----LRTVAGFMTFILLEVL--VLSALCVLDLL 117 Query: 138 LFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHY 197 F+ +E L+ ++ LI +A G + AA K +YT A LV+L + F+ Y Sbjct: 118 GFYILFEASLILLFLLIG----RAPYGS--LEAAYKIVLYTMAGSLVLLPTL----FMIY 167 Query: 198 NATGVWTFNYEELLNTPMSSGVEYLLMLG--FFIAFAVKMPVVPLHGWLPDAHSQAPTAG 255 + G Y M+ + +LG AVK+P++P+H WLP+AH APTAG Sbjct: 168 SECGTTNVLY-------MTCAYNHQTVLGWGLLAVLAVKIPLMPVHLWLPEAHVAAPTAG 220 Query: 256 SVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLI 315 SV LAG+LLK G LRF LP+ P P+ L ++ + Q D+K+++ Sbjct: 221 SVLLAGVLLKLGGIGFLRFMLPVVPEFCVSVFPLVSTLCLVSFLFSTLSTLRQIDLKKIV 280 Query: 316 AYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMG 375 AY+S++HM V +AI++ S+ + + MIAHGL + LF++ G LY+R HT+ + Sbjct: 281 AYSSIAHMSMVTLAIFSQSEFSAYSSSFLMIAHGLISPALFLIVGILYDRAHTKFILYFS 340 Query: 376 GLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVY 435 GL + M L F + L P NF+ E + + F V ++ + V + Y Sbjct: 341 GLGASMPIGSTLFFLFTLGNLAFPLFPNFIAEVLCMVSIFAVHELLAYVFCVCQVLGAAY 400 Query: 436 SLAMLHRAYFG--KAKSQIASQE 456 +R G + + + E Sbjct: 401 GFWAFNRVVHGLPRGPADVTRTE 423 >UniRef50_Q60BG3 Putative NADH ubiquinone/plastoquinone complex subunit n=1 Tax=Methylococcus capsulatus RepID=Q60BG3_METCA Length = 516 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 132/424 (31%), Positives = 215/424 (50%), Gaps = 9/424 (2%) Query: 77 ISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDM 136 ++ HL +DG+SL V+LT LL VLA+LC + G + ++ +G+FLA+D+ Sbjct: 80 LNYHLGVDGISLGFVLLTALLTVLALLCREVGKDGPSGLYVATVLACEATAMGMFLALDL 139 Query: 137 FLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVML-IAILALVFV 195 F+ + L P+ ++ W + DG A + ++ GL +L + + L Sbjct: 140 VQFWIAACLELWPVALILGRW--EGGDGAE----ARRVYLRFAGMGLALLGVGVFLLGLG 193 Query: 196 HYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAG 255 H ATG+W+++ LL TP+S E L+ + F F+V++ PLHGWLP +Q P Sbjct: 194 HARATGIWSYDLAALLETPLSGTFESLVFVLLFYGFSVRLAQFPLHGWLPIVAAQGPPVT 253 Query: 256 SVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLI 315 ++ L + +K YGLLRF LPL PNA E+ + + L + G+FYGA +A Q D +RL+ Sbjct: 254 ALALL-VGMKVGIYGLLRFVLPLLPNAVHEWTALTLGLALAGLFYGAVLALMQLDFRRLM 312 Query: 316 AYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMG 375 A+ +VS G ++ ++ G ++ G++ AGLF L G L R T + +G Sbjct: 313 AFATVSQTGMLVAGVFALDLEGLSGTLLLAFDFGVAGAGLFFLAGMLRCRTGTLLLPRLG 372 Query: 376 GLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVV-PVITVISTFGLVFASV 434 GL+ + L L A +T+ MPGT F ++L G + P + G V A+ Sbjct: 373 GLFESLPGPGLLFLVAASSTIAMPGTPGFDAAHLLLEGLIENRGPAAAIAVAVGNVLAAG 432 Query: 435 YSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIG 494 + L R + +S E P RE +I LL ++L+ +GFY P + + ++ Sbjct: 433 FLLWAFQRVFLAHRRSHRPYPERPRPGWREHTLIALLCLVLLGVGFYTAPWVHLTRQSLF 492 Query: 495 NIQQ 498 + Q Sbjct: 493 RLAQ 496 >UniRef50_A0EYN0 NADH-ubiquinone oxidoreductase chain 4 n=2 Tax=Xenoturbella bocki RepID=A0EYN0_XENBC Length = 456 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 135/423 (31%), Positives = 215/423 (50%), Gaps = 41/423 (9%) Query: 81 LAIDGLSLLMVVLTGLLGVLAVLCS---WKEIEKYQGFFHLNLMWILG-GVIGVFLAIDM 136 +++D +S +++L+ L L +L S K+ K Q L + +L +I F + Sbjct: 54 MSLDFISSPLMILSAWLAPLMMLASKAHMKDKTKVQKKIFLTITSLLQMTLIMTFTVNEW 113 Query: 137 FLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVH 196 LFF +E L+P LI +G + K R+ A++ F IYT L +L +++ L Sbjct: 114 VLFFIMFETTLIPTLTLITKFGAQ----KERLIASSYFMIYTLCGSLPLLTSLMIL---- 165 Query: 197 YNATGVWTFNYEELLNTPMSSGVEYLL--------MLGFFIAFAVKMPVVPLHGWLPDAH 248 T T N L T + GV + + GFFI KMP+ +H WLP AH Sbjct: 166 --NTKTGTSNMMVL--TLQTDGVNMYMKNMWWMISLTGFFI----KMPLFSVHLWLPKAH 217 Query: 249 SQAPTAGSVDLAGILLKTAAYGLLRFSLPLF-PNASAEFAPIAMWLGVIGIFYGAWMAFA 307 +AP AGS+ LA +LLK YGLLR + P+F P ++ I M L + G + + Sbjct: 218 VEAPVAGSMILAAVLLKMGGYGLLRMA-PIFNPFSTLLTNKIIMALALWGTLMTSMICLR 276 Query: 308 QTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIH 367 QTD+K LIAY+SV+HM AI + ++QGA MIAHGL+++ LF L +YER H Sbjct: 277 QTDLKSLIAYSSVAHMSMTTAAILIMTSWSWQGAYNMMIAHGLTSSLLFALANTIYERSH 336 Query: 368 TRDMRMMGGLWSKMKWLPALSLFFAVATL---GMPGTGNFVGEFMILFGSFQVVPVITVI 424 TR+M + G M P++ +++ +A L +P T NF+GE M++F + ++ Sbjct: 337 TRNMTITRGYKILM---PSMYMWWMLAMLSNMSLPPTMNFLGEIMMIFSLMNWSVLTVLV 393 Query: 425 STFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLR--ELFMILLLVVLLVLLGFYP 482 + V ++YSL + GK + + + P S++ E+ L+ ++ L L+ P Sbjct: 394 TAVATVMTALYSLYTVIMTQHGKP---MNNNKNPTNSMKSTEMMNSLMHILPLTLMITMP 450 Query: 483 QPI 485 + I Sbjct: 451 EII 453 >UniRef50_B1Q0F9 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Mastigoproctus giganteus RepID=B1Q0F9_MASGI Length = 441 Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 111/373 (29%), Positives = 188/373 (50%), Gaps = 17/373 (4%) Query: 106 WKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGK 165 +K ++ Y F+ +M++ ++ F +F+ F+EM L+P++ +I WGH Sbjct: 76 FKVLKTYFDFYVKIIMFLAITLLICFFTGHFMVFYIFFEMSLIPLFLMILGWGHNPE--- 132 Query: 166 TRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLML 225 R+ A YT + L MLI ++ + +N G T + G +++++ Sbjct: 133 -RLQAGIYMLFYTLTASLPMLIGLVKV----WNLIG--TLEMSLFIFEDCQMGWWWIVLM 185 Query: 226 GFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAE 285 G AF VK+P+ +H WLP AH +AP AGS+ LAGILLK YG++R + PL Sbjct: 186 G---AFLVKLPMFFVHLWLPKAHVEAPVAGSMILAGILLKLGGYGMIRMT-PLLAFEMKI 241 Query: 286 FAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQM 345 ++ + + + ++G FY + Q D+K LIAY+SVSHMG ++ I++ + GA++ M Sbjct: 242 YSSVILGVSLVGAFYIGLICLCQNDMKALIAYSSVSHMGMMVSGIWSMKVVGMGGALVMM 301 Query: 346 IAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFV 405 IAHGL ++GLF +YER +R + + G+ S V G P + N Sbjct: 302 IAHGLCSSGLFCAANIMYERFGSRSILINRGILSIWPIFGLFCFLLCVFNFGAPPSINLF 361 Query: 406 GEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLREL 465 E ++ + ++ F++VYS+ + + GK I S G+ LRE+ Sbjct: 362 AELTLMMSIISWDILTMLLLMLICFFSAVYSIFLFSIIHHGK---TIPSYSTSGLELREM 418 Query: 466 FMILLLVVLLVLL 478 ++ +V LV+L Sbjct: 419 MILFYHLVFLVIL 431 >UniRef50_Q34048 NADH-ubiquinone oxidoreductase chain 4 n=219 Tax=Protostomia RepID=NU4M_CERCA Length = 446 Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 127/402 (31%), Positives = 212/402 (52%), Gaps = 28/402 (6%) Query: 76 GISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF---FHLNLMWILGGVIGVFL 132 IS + D LS +++L+ + L ++ S + + KY + F N++ +L ++ F Sbjct: 47 NISYFMGFDVLSYGLILLSFWICSLMIVAS-ESVNKYNNYKNLFLFNVLMLLIFLVLTFS 105 Query: 133 AIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILAL 192 ++++F+F+ F+E L+P FLI WG++ R+ A YT L +L+ I Sbjct: 106 SMNLFMFYLFFESSLIPTLFLILGWGYQPE----RLQAGVYLLFYTLLVSLPLLVGIF-- 159 Query: 193 VFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAP 252 +++ N T N+ L N + + YL M+ +AF VKMP+ +H WLP AH +AP Sbjct: 160 -YLYKNCN---TMNFYLLSNYMFNCNLLYLAMI---LAFLVKMPMFLVHLWLPKAHVEAP 212 Query: 253 TAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIK 312 +GS+ LAGI+LK YGLL ++ I + + +IG + + QTD+K Sbjct: 213 VSGSMILAGIMLKLGGYGLLA-VFSFLQLIGLKYNYIWVSISLIGGVLISLVCLRQTDLK 271 Query: 313 RLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMR 372 LIAY+SV+HMG VL + T S G+ MI HGL ++GLF L YER+ +R + Sbjct: 272 ALIAYSSVAHMGIVLGGLMTLSYWGLSGSYTLMIGHGLCSSGLFCLANITYERLGSRSLL 331 Query: 373 MMGGLWSKMKWLPALSL---FFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVIS-TFG 428 + GL + ++P+++L +V + P + N +GE +L S +T+IS +F Sbjct: 332 INKGL---LNFMPSMTLWWFLLSVCNMAAPPSLNLLGEISLL-NSIVSWSWLTMISLSFL 387 Query: 429 LVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILL 470 F++ Y+L + + GK S + S G ++RE F++ L Sbjct: 388 SFFSAAYTLYLYAYSQHGKIFSGVYS--FSGGNIREYFLLFL 427 >UniRef50_Q8WB13 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Crioceris duodecimpunctata RepID=Q8WB13_CRIDU Length = 443 Score = 154 bits (390), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 124/403 (30%), Positives = 204/403 (50%), Gaps = 32/403 (7%) Query: 66 EFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI--EKYQGFFHLNLMWI 123 EF+ + F +S + D LS +V+L+ + L ++ S K + E Y F L+ + Sbjct: 37 EFNFS-LNLFSLSYYYGYDSLSYYLVLLSFWICSLMIMASEKLLKEEYYYKIFMFLLICL 95 Query: 124 LGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGL 183 + + F++++ F+F+ F+E+ L+P+ FLI WG++ RI A YT L Sbjct: 96 MLVLFLTFVSLNFFIFYLFFEISLIPVLFLIIGWGYQPE----RIEAGLYLLFYTLLMSL 151 Query: 184 VMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLM-LGFFIAFAVKMPVVPLHG 242 M++ I F +Y ++ L+ MS +L M L + F K+P+ +H Sbjct: 152 PMMVGI----FFYYYSS-------YHLIFYLMSEQSLHLFMYLCINMVFFCKIPMFFIHL 200 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGA 302 WLP AH +AP +GS+ LAGI+LK YGL+RF +P+F + + + L +IG F+ + Sbjct: 201 WLPKAHVEAPVSGSMILAGIMLKLGGYGLMRF-MPMFMSMVLNIGVLLITLSLIGGFFVS 259 Query: 303 WMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQL 362 + Q+DIK LIAY+SV+HM ++ + + S Y G+++ MIAHGL ++GLF L Sbjct: 260 LICLRQSDIKSLIAYSSVAHMSLLIGGLMSMSLWGYYGSLMMMIAHGLCSSGLFCLANIT 319 Query: 363 YERIHTRDMRMMGGLWSKMKWLPALS---LFFAVATLGMPGTGNFVGEFMILFGSFQVVP 419 YER+ +R + + GL + P+L+ + + P T N E M++ Sbjct: 320 YERLMSRSLYLSKGL---LNIFPSLAFWWFMLLIGNMAAPLTLNLFSEIMLINSLISYSN 376 Query: 420 VITVISTFGLVFASVYSLAML----HRAYFG--KAKSQIASQE 456 I F++VYSL + H AY+ QI +E Sbjct: 377 FCLYILILLSFFSAVYSLYLYSFSQHGAYYSGLMCTYQIYFRE 419 >UniRef50_D1JBE4 Putative NADH-quinone oxidoreductase, subunit M n=1 Tax=uncultured archaeon RepID=D1JBE4_9ARCH Length = 497 Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 146/514 (28%), Positives = 235/514 (45%), Gaps = 50/514 (9%) Query: 7 ILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSE 66 I++P I + T R K +IA I + T AL + G L Q I + Sbjct: 10 IIVPVIAAIVILLTRRILGKKAGFIAAIALLYTTALLCIV----GIRLYQGTVISE---- 61 Query: 67 FDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEK--------------- 111 W P +S L DGLSL + ++ ++ S + +E+ Sbjct: 62 -SYLWGPY--VSFGLLADGLSLPIALIINIICTALAFHSLRYMEQRVDILYGEEDEKTKI 118 Query: 112 --YQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRIT 169 Y +F L L+ + +G+ A ++ + + F E++++P Y LI+ +G+ R Sbjct: 119 NYYTAYFGLYLL-VSAAFMGICFATNLIVLYLFIELLIIPFYLLISYFGYIE-----RFR 172 Query: 170 AATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFI 229 A F++ SG +L A V V+ + L +P++ V L+ +G FI Sbjct: 173 VAVMCFLWGIVSGTFVL---FASVLVYSQIGSFEISELDALAGSPIAVWVALLIFIGLFI 229 Query: 230 AFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLR-FSLPLFPNASAEFAP 288 KM V PLH W+P +APT + L I AAY ++R LPL+ + P Sbjct: 230 ----KMAVFPLHVWMPWVDGEAPTCIAASLT-IYANLAAYVIVRVLILPLYDDLKVFSIP 284 Query: 289 IAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAH 348 I M L +I I YGA +A AQTD+KRL A +++ + F +I + + + +G + ++H Sbjct: 285 I-MILALITIIYGALLAMAQTDVKRLCACSTIGQISFSVIGLGALTIWSLEGGLYYFLSH 343 Query: 349 GLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEF 408 L A LF G + RDM+ MGGL KM L + A G+P T F G++ Sbjct: 344 ILGKAILFSTAGIVVYVTGIRDMKKMGGLIHKMPITATLWITAATILTGVPLTSGFTGKW 403 Query: 409 MILFGSFQVVP-----VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQ-ELPGMSL 462 ++ G F P I ++ + +VY+ R +FG K ++A+ + L Sbjct: 404 ILFTGVFAAYPGYVGQAIAILGILATILTAVYTFGAAKRIFFGPLKPELANDTRIRDPPL 463 Query: 463 RELFMILLLVVLLVLLGFYPQPILDTSHSAIGNI 496 +L+L V+ +++G YP+PILD HS IG I Sbjct: 464 TMTIPLLILAVISIIIGLYPKPILDLFHSVIGLI 497 >UniRef50_C1KRK0 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Tachypleus tridentatus RepID=C1KRK0_TACTR Length = 445 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 118/340 (34%), Positives = 172/340 (50%), Gaps = 16/340 (4%) Query: 131 FLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAIL 190 F +D+ +F+ F+E +LVP + LI WG + R+ A F YT + L +L+ IL Sbjct: 103 FGCLDLLMFYVFFECVLVPTFLLIIGWGGQPE----RLQAGIYMFFYTLCASLPLLVGIL 158 Query: 191 ALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQ 250 L Y +G + Y +LN S +E + F IAF VK+PV LH WLP AH + Sbjct: 159 NL----YGKSGSMVY-YVLMLN---GSEMEMIWFFIFIIAFLVKLPVFLLHLWLPKAHVE 210 Query: 251 APTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTD 310 AP AGS+ LAGILLK YGL R L LF N + +G++G + +++ Q D Sbjct: 211 APIAGSMILAGILLKLGGYGLFR-VLFLFQNFVIYSGGFLLSVGLMGGLFTSFICLRQVD 269 Query: 311 IKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRD 370 +K LIAY+SV HMG V+ I T + GA++ MIAHGL ++ LF L +YER ++R Sbjct: 270 LKSLIAYSSVGHMGMVMGGIITLNSWGCSGALLLMIAHGLCSSALFCLANLVYERFYSRS 329 Query: 371 MRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLV 430 + ++ GL S L F V + P + N GE ++ + Sbjct: 330 LMVLKGLMSIFPMLAMWWFLFCVFNMAAPPSMNLFGEIFLMMSMISWSRWTMICLILLSF 389 Query: 431 FASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILL 470 F++ YSL M GK+ E+ +RE ++LL Sbjct: 390 FSACYSLFMFSSTQHGKSWMMFPFNEI---KVREYILLLL 426 >UniRef50_B2CKE1 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Phrynus sp. 1 SEM-2008 RepID=B2CKE1_9ARAC Length = 446 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 111/318 (34%), Positives = 168/318 (52%), Gaps = 31/318 (9%) Query: 131 FLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAIL 190 F + +M +F+ ++E +L+P++ ++ +G++ R+ A F YT + L +L+ ++ Sbjct: 102 FWSENMLMFYVYFEGVLIPIFLMVTGYGYQ----PERLMAGLYMFFYTLFASLPLLVGMM 157 Query: 191 ALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQ 250 G +F LL + + + F +AF VKMP+ +H WLP AH + Sbjct: 158 WFE----EQWGCLSFQVISLLESEVYGWWS----VTFMLAFLVKMPMYFVHLWLPSAHVE 209 Query: 251 APTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMW------LGVIGIFYGAWM 304 AP AGS+ LAG+LLK YGL RF LF + S I MW +G++G + + Sbjct: 210 APVAGSMILAGVLLKLGGYGLYRF---LFFSKSV----IKMWGGYMVSVGLMGGLFVGLI 262 Query: 305 AFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYE 364 Q D+K LIAY+SV+HMG V+ AI++GS YQG + M+AHGL ++GLF L LYE Sbjct: 263 CLVQIDLKSLIAYSSVAHMGLVMAAIFSGSWGGYQGGFMMMVAHGLCSSGLFCLANILYE 322 Query: 365 RIHTRDMRMMGGLWSKMKWLPALSLF---FAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 R TR M ++ G+ M P LSL+ F+ + P N GE MIL + Sbjct: 323 RFSTRSMLLLSGM---MGIFPGLSLWWFLFSTMNMAAPPGINMFGEVMILISVVSFMWWS 379 Query: 422 TVISTFGLVFASVYSLAM 439 ++ G+ A YSL M Sbjct: 380 VLVMMGGMFIAGAYSLWM 397 >UniRef50_Q6PYA2 NADH-ubiquinone oxidoreductase chain 4 n=3 Tax=Araneae RepID=Q6PYA2_9ARAC Length = 429 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 113/337 (33%), Positives = 182/337 (54%), Gaps = 35/337 (10%) Query: 81 LAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFF 140 + +D LS+LMV+L+ L+ V+ ++ S + ++ I+ +I F + ++ +F+ Sbjct: 49 MMMDPLSILMVLLS-LISVILIILSSNMLTLITP----TIIPIMLILITTFSSKNILMFY 103 Query: 141 FFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNAT 200 F+E++L+P LI + G + R+ A+ +YT + L +L+ I + +N Sbjct: 104 IFFELVLIPTMLLITMNGKQPE----RLQASIYLIMYTIVASLPLLMMI-----IFFNP- 153 Query: 201 GVWTFNYEELLNTPM--SSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVD 258 FN LLN + S + +++M AF VKMP+ H WLP AH +AP GS+ Sbjct: 154 ----FNSFPLLNITLFTYSSIMFIMM-----AFLVKMPMFLTHLWLPKAHVEAPLEGSMI 204 Query: 259 LAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWM----AFAQTDIKRL 314 LA +LLK YG++RF +PL N+ I MW+ I + GA M Q D+K L Sbjct: 205 LAAVLLKLGGYGIIRF-IPLCLNS---INSINMWVVSISLM-GATMTSMNCIRQKDLKSL 259 Query: 315 IAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMM 374 IAY+SV+HMGFVL ++T + GA++ MIAHGLS++ LF+L LY + HTR++ + Sbjct: 260 IAYSSVAHMGFVLTGLFTLYSMGMNGAILMMIAHGLSSSALFLLVNDLYFKYHTRNILLF 319 Query: 375 GGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMIL 411 GL++ M + F + P T N E M++ Sbjct: 320 KGLFTVMPNITFWWFMFMALNISAPPTINTFSEIMMM 356 >UniRef50_P55781 NADH-ubiquinone oxidoreductase chain 4 n=1187 Tax=Chordata RepID=NU4M_GADMO Length = 460 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 116/345 (33%), Positives = 170/345 (49%), Gaps = 24/345 (6%) Query: 127 VIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVML 186 +I F A +M +F+ +E L+P +I WG+ R+ A T F YT A L +L Sbjct: 107 LILAFGATEMIMFYVMFEATLIPTLLVITRWGNHTE----RLNAGTYFLFYTLAGSLPLL 162 Query: 187 IAILALVFVHYNATGVWTF----NYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 +A + + N TG + + LL P S + + IAF VKMP+ +H Sbjct: 163 VA----LLMLQNNTGTLSLLIIPYAKPLLLMPFGSKIWWA---ACMIAFLVKMPLYGMHL 215 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAP---IAMWLGVIGIF 299 WLP AH +AP AGS+ LA +LLK YG++R + L P + P +A+W G+ Sbjct: 216 WLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRLMIVLDPLSKEMVYPFIVLALW----GVI 271 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 + QTD+K LIAY+SVSHMG V I + + GA+I MIAHGL+++ LF L Sbjct: 272 ITGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLASSALFCLA 331 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP 419 YER H+R M + GL + + ++A L +P N +GE MIL F Sbjct: 332 NTNYERTHSRTMLLARGLQIALPLMTTWWFIASLANLALPPLPNLMGELMILTSLFNWSA 391 Query: 420 VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRE 464 +++ G + + YSL M + G + + LP RE Sbjct: 392 WTLILTGIGTLITAAYSLYMFLMSQRGPLPQHMLA--LPPSYTRE 434 >UniRef50_O79421 NADH-ubiquinone oxidoreductase chain 4 n=27 Tax=Cephalochordata RepID=NU4M_BRALA Length = 452 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 133/421 (31%), Positives = 203/421 (48%), Gaps = 38/421 (9%) Query: 76 GISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEK----YQGFFHLNLMWILGGVIGVF 131 +S + D +SL + VL+ L L +L S + + YQ F +++ G ++ F Sbjct: 50 NVSYMMTSDFVSLGLTVLSIWLLPLMLLASQQHMVSESLIYQRVFVGCQVFLTGALVLAF 109 Query: 132 LAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILA 191 +A D+ LF+ +E L+P LI WG + K R A T F +T L +LI ++ Sbjct: 110 MASDLLLFYIAFESTLLPTLMLITRWGAQ----KERYQAGTYFMFFTLVGSLPLLICLIG 165 Query: 192 LVFVHYNATGVWTFN--YEELLNTPMSSGVEYLLM---LGFFIAFAVKMPVVPLHGWLPD 246 Y G + YE + + YL+ +G +AF VK+P+ +H WLP Sbjct: 166 ----QYQMVGSLALDLSYEGVFQ------LSYLVNFWWVGCILAFLVKLPLYGVHLWLPK 215 Query: 247 AHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNA---SAEFAPIAMWLGVIGIFYGAW 303 AH +AP AGS+ LAG+LLK YG++R SL A S F +A+W GI Sbjct: 216 AHVEAPIAGSMVLAGVLLKLGGYGMMRVSLMWGATAMLSSEVFLALALW----GIVVMGG 271 Query: 304 MAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLY 363 + QTD+K LIAY+SV HM V+ + TG Y GA++ MIAHGL ++ LF L Y Sbjct: 272 ICLRQTDLKSLIAYSSVGHMALVVGGVLTGVAWGYNGAMVLMIAHGLVSSCLFCLANLWY 331 Query: 364 ERIHTRDMRMMGGLWSKMKWLPALSL---FFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 ER TR++ GL + P +SL ++ + +P N GE + + + P Sbjct: 332 ERSSTRNLSGSRGL---IMIFPLISLGWFLMSLMNMALPPAINLFGELVAMVALYNWSPY 388 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 V + G V + YSL + + +G + L ++ RE + L +V + L F Sbjct: 389 SIVYMSLGAVLTAAYSLYLFGMSQWGNTMKNY--KNLYTITSREYLLTTLHLVPAIYLIF 446 Query: 481 Y 481 Y Sbjct: 447 Y 447 >UniRef50_B2A3T0 NADH dehydrogenase (Quinone) n=2 Tax=Clostridia RepID=B2A3T0_NATTJ Length = 500 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 119/398 (29%), Positives = 199/398 (50%), Gaps = 25/398 (6%) Query: 72 IPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCS--WKEIEKYQGFFHLNLMWILGGVIG 129 IP FGIS +D L + +L + +L + S + + E Y G ++ L L G +G Sbjct: 72 IPPFGIS--FMVDTLGFGLSLLASFIWMLVTIYSLEYMKKENYTGRYYPALSLTLSGSMG 129 Query: 130 VFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAI 189 +FLA D+F F F+E+M + Y LI ++ K + A K+ I T GL + I Sbjct: 130 LFLAGDLFTMFIFFEIMSLVSYLLII-----HNETKEALRAGYKYLIVTIIGGLFLFFGI 184 Query: 190 LALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHS 249 + + + + T + +++TP S + + L F I F +K +VPLH WLP+AH Sbjct: 185 I----ITFELSQTITLSEMGIISTPTS--LAFAGFLSFVIGFGMKAGMVPLHIWLPEAHP 238 Query: 250 QAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNA---SAEFAPIAMWLGVIGIFYGAWMAF 306 AP+ S L+GI++KT AYGL+R +F A + I + VI IF G+ +A Sbjct: 239 VAPSPASALLSGIMIKTGAYGLIRIMFHVFDYQMILEANWHLILAVVAVITIFLGSAVAI 298 Query: 307 AQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERI 366 Q D+KR +AY+S+ MG++L+ + ++ A G + + +H + LF+ G + + Sbjct: 299 TQEDLKRRLAYSSIGQMGYILLGLAILTETAMTGDIFHIFSHAFMKSTLFLAAGAMIMKT 358 Query: 367 HTRDMRMMGGLWSKMKWLPALSLFFAVATL---GMPGTGNFVGEFMILFGSFQV-VPVIT 422 + + + G+ M P L F +A L G+P F+ ++ + G+ + P Sbjct: 359 GKKKIADLKGVGRAM---PLTMLSFTIAALAMIGIPPLNGFISKWSLSLGALEAGQPYYV 415 Query: 423 VISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGM 460 VI + SVY L +++ AYFGK++ E G+ Sbjct: 416 VILLISSLMNSVYYLPIINTAYFGKSEETDDDVESKGV 453 >UniRef50_P48917 NADH-ubiquinone oxidoreductase chain 4 n=5 Tax=Eukaryota RepID=NU4M_PICCA Length = 511 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 116/392 (29%), Positives = 213/392 (54%), Gaps = 31/392 (7%) Query: 77 ISIHLAIDGLSLLMVVLTGLLGVLAVLCSW---KEIEKYQGFFHLNLMWILGGVIGV-FL 132 I+I+ IDG+SL ++ LT +L ++++ +W K +K + ++ L+ I+G +I + F+ Sbjct: 72 ININWGIDGISLWLINLTLILLPISLISNWNISKNEDKSKVLTYVLLILIIGIIIILNFI 131 Query: 133 AIDMFLFFFFWEMMLVPMYFLIALWGH--------------KASDGKTRITAATKFFIYT 178 +D+ F+ +E L+P++ LI G ++ R AA FIYT Sbjct: 132 CLDLITFYILFEATLLPLFILIGKLGSLPYNGNNKIIIKGINNNNITPREKAAYYIFIYT 191 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 S L ML++I +++ N + N +S ++ ++ +G I VK PV Sbjct: 192 LFSSLFMLLSIGIYIYMINNIDYN------NIYNIILSIDLQSIIFIGLIIGILVKTPVF 245 Query: 239 PLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 P+H WLP H+++P +GS+ LAGI++K A Y ++R L + + P+ +G++ I Sbjct: 246 PVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIRLILINLSDVIIIYNPLIYTIGILTI 305 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFIL 358 FY + Q DIK +IAY+S+ HM +++I++ + L +G+++ IAHG ++ LF+L Sbjct: 306 FYIGLITLKQIDIKVIIAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFLL 365 Query: 359 CGQ-LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVA---TLGMPGTGNFVGEFMILFGS 414 G LY+R H+R + L + ++P S++ +A +G+P + NF+GEF+ L G Sbjct: 366 VGGILYDRYHSRLIYYYQSLAT---YMPIFSIYLLIAGLFNMGIPLSLNFIGEFLSLNGI 422 Query: 415 FQVVPVITVISTFGLVFASVYSLAMLHRAYFG 446 F + ++STF L ++Y + + + +G Sbjct: 423 FIYNSLFAILSTFSLFITTIYQMKLTTKLLYG 454 >UniRef50_Q94R72 NADH-ubiquinone oxidoreductase chain 4 (Fragment) n=29 Tax=Arthropoda RepID=Q94R72_TRICA Length = 444 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 125/389 (32%), Positives = 206/389 (52%), Gaps = 31/389 (7%) Query: 84 DGLSLLMVVLTGLLGVLAVLCSWKEIEK--YQGFFHLNLMWILGGVIGVFLAIDMFLFFF 141 D LS +M+ L+ + L +L S K K + GFF ++ ++ + F ++++F+F+ Sbjct: 54 DLLSFMMLFLSFWICSLMLLASEKIYLKNSWTGFFMFVVLMLMLSLYLTFSSLNLFIFYI 113 Query: 142 FWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATG 201 F+E+ L+P LI WG++ R+ A YT + L M+I++ F Y Sbjct: 114 FFEVSLIPTLILIVGWGYQPE----RLQAGVYLLFYTLLASLPMMISL----FFCYGK-- 163 Query: 202 VWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAG 261 ++ +Y L S + L+ + FFI K+P+ +H WLP AH +AP +GS+ LAG Sbjct: 164 FYSLHYFYLSGMVNSLFIYLLVNMVFFI----KIPMFFVHLWLPKAHVEAPVSGSMILAG 219 Query: 262 ILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVS 321 I+LK YG++R + +F A I + L ++G FY + + Q+D+K LIAY+SVS Sbjct: 220 IMLKLGGYGMMRL-MIMFQEIGALINVIFIGLSLVGGFYVSLICLRQSDMKSLIAYSSVS 278 Query: 322 HMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKM 381 HMG VL + T + G++ M+AHGL ++GLF L YER+H+R + M GL + M Sbjct: 279 HMGLVLAGVMTMNFWGLGGSLTMMVAHGLCSSGLFCLANISYERLHSRSLYMNKGLINVM 338 Query: 382 KWLPALSLF---FAVATLGMPGTGNFVGEFMI---LFGSFQVVPVITVISTFGLVFASVY 435 P+LS+F + + P + N +GE ++ L G ++ + ++ +F F +VY Sbjct: 339 ---PSLSMFWFLLLASNIAAPPSMNLLGEIVLINSLVGFSELSMIFLMLVSF---FGAVY 392 Query: 436 SLAMLHRAYFGKAKSQIASQELPGMSLRE 464 SL + + G S S S+RE Sbjct: 393 SLFLYSYSQHGCLYSGCYSYF--SCSVRE 419 >UniRef50_Q9T7K5 NADH-ubiquinone oxidoreductase chain 4 n=11 Tax=Crassostrea RepID=Q9T7K5_CRAGI Length = 451 Score = 151 bits (381), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 95/329 (28%), Positives = 169/329 (51%), Gaps = 19/329 (5%) Query: 127 VIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVML 186 ++ F+ + +F+ +E L+P+ +I +WG G+ + ++ G L Sbjct: 104 LVQCFMVNTLAMFYVLFESTLIPLASIIGIWG-----GQIERVPSIQYMAAYTVGGSFPL 158 Query: 187 IAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPD 246 + I + VH ++ +W + + ++ + +L G F+ +K+P P H WLP Sbjct: 159 LLIFTTMEVHAGSSFMWFISMK-------TTSLNWLFWGGCFLGLLIKLPAFPFHAWLPK 211 Query: 247 AHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAF 306 AH QAP GSV LAGILLK YG+ R + LF F + M ++G YGA+M Sbjct: 212 AHVQAPVGGSVILAGILLKLGGYGITRMMM-LFSYTLESFGILVMSFSIVGSVYGAFMCL 270 Query: 307 AQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERI 366 Q+DIK+LIAY+SVSHM F ++ +++ +++ GA I +++HG + GLF+L G E + Sbjct: 271 RQSDIKKLIAYSSVSHMAFSIMGLFSCTEVGMVGAYIMLVSHGFISPGLFVLSGINSEMV 330 Query: 367 HTRDMRMMGGLWSKMKWLPALSLFFAV---ATLGMPGTGNFVGEFMILFGSFQVVPVITV 423 H+R +++M ++ P+L F+ V A LG+P + E + + + P + V Sbjct: 331 HSRKIKVMS---DGVRAAPSLGFFWLVMIMANLGVPPCPVIISEVLSVVCVIALYPWVFV 387 Query: 424 ISTFGLVFASVYSLAMLHRAYFGKAKSQI 452 + + + YS ++ + K K ++ Sbjct: 388 LLLMYFILSGAYSFSLYCQLTRTKKKIKM 416 >UniRef50_B5GCR5 NADH dehydrogenase subunit NuoM2 n=5 Tax=Streptomyces RepID=B5GCR5_9ACTO Length = 564 Score = 150 bits (380), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 142/382 (37%), Positives = 199/382 (52%), Gaps = 30/382 (7%) Query: 51 GYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIE 110 G+ +A I Q+ D+ WI + I HL +DG+SL ++VLT LL L L S+ Sbjct: 31 GFDRDHAARI---QASTDVSWIAAYDIRFHLGVDGISLPLLVLTALLTFLCALHSYFRPP 87 Query: 111 K--YQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRI 168 + F L+ + GG + F +D+ LFF +E +L+PMYFLIA WG G R Sbjct: 88 RGGSPRAFVALLLLLEGGALAAFAVLDLVLFFVAFETVLIPMYFLIARWG-----GAKRE 142 Query: 169 TAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLN---TPMSSGVEYLLML 225 AA KF ++T VML+ +L TF+ L + +S+ V+ +L Sbjct: 143 QAAWKFILFTLVGSAVMLLGLL------LTGVKAGTFDMVALATDNGSGLSTSVQVTAVL 196 Query: 226 GFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAE 285 + AVK P+ PLH WLP AH+ APTAGSV LAG+LLK YG +R +P+ P Sbjct: 197 AIGLGLAVKTPMWPLHSWLPAAHTAAPTAGSVLLAGVLLKMGTYGFVRVVIPVAPEGMKV 256 Query: 286 FAPIAMWLGVIGIFYGAWMAF------AQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQ 339 FAP L GI +G+ A D+KRL+AY+SV HMGFVL+ I + + Sbjct: 257 FAPWLAVLAAAGILWGSLACLQLVRRGAGGDLKRLVAYSSVGHMGFVLLGIASMTPQGLN 316 Query: 340 GAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGG-----LWSKMKWLPALSLFFAVA 394 GA+ IAHGL LF L G + +R T + + G L+ + AL F AVA Sbjct: 317 GALFANIAHGLITGLLFFLVGGVKDRAGTSVIDRLAGSAGAALYGRAPRYAALLAFAAVA 376 Query: 395 TLGMPGTGNFVGEFMILFGSFQ 416 +LG+PG F GE + ++G+F Sbjct: 377 SLGLPGLAGFWGEMLTMYGAFD 398 >UniRef50_Q3JBP6 Proton-translocating NADH-quinone oxidoreductase, chain M n=2 Tax=Nitrosococcus oceani RepID=Q3JBP6_NITOC Length = 513 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 129/432 (29%), Positives = 220/432 (50%), Gaps = 11/432 (2%) Query: 80 HLAIDGLSLLMVVLTGLLGVLAVL-CSW--KEI--EKYQGFFHLNLMWILGGVIGVFLAI 134 HL +DG+S+L V LT LL +L +L C EI E+ GF+ ++ ++G+F++I Sbjct: 83 HLGVDGISILFVALTALLTLLLILYCKTVSTEIVDERPIGFYVASIFAFQAVLMGLFMSI 142 Query: 135 DMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVF 194 ++ F+ + LVP ++ WG + G + A +++ ++LIAIL L + Sbjct: 143 NLLGFWLLLALELVPAGIILHRWG--TTQGPEKNWALSRYLQDMVGGIGLLLIAILLLGW 200 Query: 195 VHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTA 254 H ATG W+F +LL +P+S + + + F A ++ + P H W+P P A Sbjct: 201 YHAEATGSWSFALTDLLASPLSPKAQAPIFVLFLFGIAPRLGLFPFHAWIPIVAQHGPVA 260 Query: 255 G-SVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKR 313 V L G LK Y LLRF LPL P+A E+ + L +IG FYGA MA Q +++R Sbjct: 261 TLGVFLVG--LKVGLYALLRFILPLMPDAVEEWKSFIVTLAIIGTFYGAVMALLQVNLRR 318 Query: 314 LIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRM 373 L+A+ VSH G ++I ++ +++ +G+++ I G++A+GL + G Y T + Sbjct: 319 LLAFAVVSHTGLLIIGVFCLNRVGLEGSLLLTINFGVAASGLLFVMGIFYRSTRTTLLPR 378 Query: 374 MGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP-VITVISTFGLVFA 432 +GGL+ L L A++T+ MPGT F +IL G+ I V G V A Sbjct: 379 LGGLFDATPLLGFTFLIAALSTMAMPGTPGFDAAHLILEGAIATYHWSIAVAVASGTVAA 438 Query: 433 SVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSA 492 + + L RA+ + + + + + + E+ + + +L +GFY P L+ + Sbjct: 439 AAFLLWAFQRAFLAQRRERALQPKKIKLDVPEILLAATVCSVLAGIGFYTGPWLEMVDGS 498 Query: 493 IGNIQQWFVNSV 504 + + Q F ++ Sbjct: 499 LTALSQRFETAL 510 >UniRef50_P12775 NADH-ubiquinone oxidoreductase chain 4 n=29 Tax=Coelomata RepID=NU4M_PARLI Length = 464 Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 131/415 (31%), Positives = 202/415 (48%), Gaps = 48/415 (11%) Query: 64 QSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEK----YQGFFHLN 119 + + PW +S LA D +S ++ L+ L ++++ S I K Q F + Sbjct: 45 SNHWSAPW---HNLSNILASDSISAPLIALSCWLAPISLIASNNTISKQSELNQRTFIII 101 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 +++I G +I F A+++ LF+ +E L+P LI WG + R A F YT Sbjct: 102 VIFIAGALIITFSALELLLFYVAFETTLIPTLILITRWGAQME----RFQAGLYFMFYTL 157 Query: 180 ASGLVMLIAILALVFVHY-----NATGVWTFNYE-ELLNTPMSSGVEYLLMLGFFIAFAV 233 L +LI+++A+ N +WT + E LN + + IAF + Sbjct: 158 FGSLPLLISLIAIYISSSSLSIPNVELIWTPSETMETLNIWWALSI---------IAFLI 208 Query: 234 KMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWL 293 KMP+ H WLP AH +AP AGS+ LA ILLK YGL+R + LF S +A+ Sbjct: 209 KMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLGGYGLIRL-INLFATISLNSLSLAL-- 265 Query: 294 GVIGIFYGAWMAFA-------QTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMI 346 I + +W A QTD+K LIAY+SV HM V AI++ + GA+I MI Sbjct: 266 ----ITFCSWGALVTSIICVRQTDLKALIAYSSVGHMSIVAAAIFSSTNWGTNGALILMI 321 Query: 347 AHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVG 406 A+GL ++ LF L +YER TR + + GL + + L + A LG+P + N +G Sbjct: 322 AYGLVSSDLFSLANTVYERSGTRTLAITRGLKTILPLSTLWWLVMSAANLGLPPSPNLIG 381 Query: 407 EFMILFG----SFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQEL 457 E +IL S + P+I + + FG ++YSL + + G + I + L Sbjct: 382 EILILSSLIAWSIWLFPIIGLATIFG----AIYSLMIFQLSQQGTPTNNINNISL 432 >UniRef50_C5CEV1 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CEV1_KOSOT Length = 492 Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 146/510 (28%), Positives = 240/510 (47%), Gaps = 39/510 (7%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLW----LQGGYSLTQ 56 M++P+L++IP GFL R +P IAL LA+SL L+ +GG L + Sbjct: 1 MIIPYLVIIPLAAGFLIVLLGRKNKVLPELIALTATFSLLAISLLLFPMIESEGGAILYE 60 Query: 57 SAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF- 115 +G W+ +P+ +I ID LS +V + L VL+ + S + K+ G Sbjct: 61 LSG---WK----IPY------TISFVIDYLSAFLVTMVSALAVLSTIYSVGYMRKFSGIW 107 Query: 116 -FHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKF 174 ++ LM ++ G+ GV + D+F F F E+ L+ Y L+A G AA K+ Sbjct: 108 NYYALLMLMITGLNGVAITGDLFNLFVFMEIALIATYALVAFHGEA-----EHYEAAFKY 162 Query: 175 FIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVK 234 I + S ++L I + Y+ T T ++ N + G L+ F F +K Sbjct: 163 AIMSSLSSSLVLFGIGCV----YSMTSSLTL--MQISNKMIGVGETNLVYALFLTGFGLK 216 Query: 235 MPVVPLHGWLPDAHSQAPTAGSVDLAGILLKT-AAYGLLRFSLPLFPNASAEFAPIAMWL 293 + P H WLPDAH AP+ S L+G+L+K AY L+R +F S + + Sbjct: 217 AAMFPFHSWLPDAHPSAPSPVSAMLSGVLIKVLGAYTLIRVFYMVF-GVSELVKELFLIF 275 Query: 294 GVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAA 353 G + + GA +A Q DIKR++ ++SVS MG+++ A+ G+ L GA+ M+ H + Sbjct: 276 GTLSMVIGALVAVMQKDIKRMLGFSSVSQMGYIIFALGIGTPLGVLGAIYHMLNHAVLKG 335 Query: 354 GLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFG 413 LF+ G + TRDM M G+ + ++ SL ++ G+P G F + +I+ Sbjct: 336 LLFMDAGAVELIEGTRDMEEMKGVSDRTTYVT--SLMASLGISGVPPFGGFFSKLIIITA 393 Query: 414 SFQVVPVITVISTFGLVFASV-YSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLV 472 + I I + ++ Y L ML +A+ + K LP SL+ +IL ++ Sbjct: 394 AIYTGKFIYAIIALAVSVITLGYYLGMLKKAFRKRNKEVNDKGSLPA-SLKIPMIILAVL 452 Query: 473 VLLVLLGFYP---QPILDTSHSAIGNIQQW 499 L L + P + IL+ S I + + Sbjct: 453 TLATALFYVPVVRENILEKVVSCITDRTAY 482 >UniRef50_Q06SA1 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Acanthocardia tuberculata RepID=Q06SA1_9BIVA Length = 446 Score = 148 bits (374), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 97/289 (33%), Positives = 144/289 (49%), Gaps = 30/289 (10%) Query: 131 FLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAIL 190 F+ + LFF F+E L+P+ +I WGH+ R+ A F +YT L M + + Sbjct: 96 FMVSGLILFFIFFEAGLIPLAVMILGWGHQ----PERLQACVSFALYTVVGSLPMFVIV- 150 Query: 191 ALVFVHYNATGVWTFNYE------------ELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 VW FN ELL S + LML + F VK+PV Sbjct: 151 -----------VWVFNLCKTDSMALISMGGELLEGKFSGNSVFWLML--MLCFFVKLPVF 197 Query: 239 PLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 +HGWLP AH +AP AGS+ LAG+LLK YGL+R L + S M + + G Sbjct: 198 GVHGWLPKAHVEAPVAGSMILAGVLLKFGGYGLMRVMTCLMWDNSIMLGEAMMAISLWGA 257 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFIL 358 A + Q+D+K LIAY+SVSHMG V++ +++ S + A++ M+AHG+S+ LF L Sbjct: 258 VCSALICTVQSDLKSLIAYSSVSHMGLVMVGVFSCSSFGWSMALLMMVAHGVSSPILFAL 317 Query: 359 CGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGE 407 +E H+R + + GL S ++ L ++G+P F+ E Sbjct: 318 ANYTFELFHSRSLMVCKGLLSLFPFVSMLWFLGCALSMGLPPGSTFLSE 366 >UniRef50_A7E1Q2 NADH-ubiquinone oxidoreductase chain 4 n=2 Tax=Protostomia RepID=A7E1Q2_9CHEL Length = 455 Score = 148 bits (374), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 117/395 (29%), Positives = 212/395 (53%), Gaps = 25/395 (6%) Query: 84 DGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFW 143 D +S+LM++LT L +L ++ S + + + ++ I ++ F ++D+ +F++F+ Sbjct: 59 DNISMLMIILTLWLSMLMMMSSVIPFKLNKFIYLNIILSITIILLMFFSSLDLMMFYYFF 118 Query: 144 EMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVW 203 E++L+P + LI WG++ R+ A+ YT ++ L +L++IL L Y ++ W Sbjct: 119 EIVLIPTFILILGWGYQPE----RLQASLYLLFYTISASLPLLLSILMLS--KYGSSLNW 172 Query: 204 TFNYEELLNTPMSSGVEYLLMLGFF---IAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLA 260 + + N S + ++ ++ FF +AF VK+P+ LH WLP AH +AP +GS+ LA Sbjct: 173 IYYFY---NNMFYSNLNWVNIIWFFFFTVAFLVKIPIYSLHLWLPKAHVEAPISGSMILA 229 Query: 261 GILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSV 320 G+LLK YGL R + +F M+ ++G + + Q D+K LIAY+S+ Sbjct: 230 GVLLKLGGYGLYRIYI-IFKEFIIMINHYYMYYIIMGSIMASLICMYQVDMKSLIAYSSI 288 Query: 321 SHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSK 380 +HMG V+ I++ +++ G++I M+ HGL ++GLF + +YER+ +R M GL Sbjct: 289 AHMGLVVGGIFSMNKIGMNGSLIMMLGHGLCSSGLFCIANMMYERVGSRSMIFNKGL--- 345 Query: 381 MKWLPALSL---FFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLV--FASVY 435 + P+LSL + + P + N +GE + LF S I ++ ++ F S Y Sbjct: 346 LNLYPSLSLWCFMLLIINISAPPSMNLIGE-ISLFSSLLTNSSIVMMYLMFILSFFTSCY 404 Query: 436 SLAMLHRAYFGKAKSQIASQELPGMSLRELFMILL 470 S+ + GK S + + ++REL ++ L Sbjct: 405 SIYFYYNTQHGKLHSLYSFNFI---NMRELMLMFL 436 >UniRef50_A9LI69 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Nothopuga sp. 1 LP-2008 RepID=A9LI69_9ARAC Length = 445 Score = 147 bits (372), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 135/407 (33%), Positives = 205/407 (50%), Gaps = 58/407 (14%) Query: 84 DGLSLLMVVLTGLLGVLAVLCSWK-EIEKYQGFFHLNLMWILGGVI-GVFLAIDMFLFFF 141 D +S LM++LT L L ++ S K ++EK L+ +GGV+ VF +D+F F+ Sbjct: 54 DSMSGLMILLTFWLCGLMMMASQKIKMEKDNDESFSFLVIFMGGVLFMVFGMLDLFWFYI 113 Query: 142 FWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA------SGLVMLIA------I 189 F+E++L+P +I WG + R+ A YT SG +L I Sbjct: 114 FFELVLIPTLLMILGWGFQPE----RLQAGMYMLFYTMVCFFTFISGFDVLYMMSWVEYI 169 Query: 190 LALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHS 249 + V + +N G+W L+M+ +AF VK+P+ LH WLP AH Sbjct: 170 IMFVDMWFNMEGLWI-----------------LVMM---VAFLVKLPMFMLHLWLPSAHV 209 Query: 250 QAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQT 309 +AP AGS+ LAG+L K YGL RF + LF + L +IG +++ Q Sbjct: 210 EAPVAGSIILAGVLFKLGGYGLYRF-MNLFYGGLFWVGGYMISLCLIGGVVISFICMCQV 268 Query: 310 DIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTR 369 D+K LIAY+SVSHMG +L +T S G ++ M+AHGL ++GLF L YER+HTR Sbjct: 269 DLKSLIAYSSVSHMGILLGGYFTFSGWGMGGGLVMMLAHGLCSSGLFCLVNMFYERLHTR 328 Query: 370 DMRMMGGLWSKMKWLPALSLFFAVATLG---MPGTGNFVGEFMILFG----SFQVVPVIT 422 + M+ G+ M P++ LF+ + ++G P + N +GE M++ S V+ VI Sbjct: 329 SLMMIKGM---MLMFPSIGLFWFLLSMGNMASPPSINLLGEIMLMISMIGWSSLVIFVIG 385 Query: 423 VISTFGLVFASV-YSLAMLHRAYFGKAKSQIASQELPGMSLRELFMI 468 V+S F SV Y++ M GK+ L + +RE M+ Sbjct: 386 VLS-----FMSVGYTIYMYSSVQHGKSW---VYYGLDSIKIREYLML 424 >UniRef50_O99825 NADH-ubiquinone oxidoreductase chain 4 n=3 Tax=Ixodidae RepID=NU4M_RHISA Length = 433 Score = 147 bits (371), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 127/404 (31%), Positives = 201/404 (49%), Gaps = 49/404 (12%) Query: 84 DGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFW 143 D +SL MV+LT + +L ++ S F+ L+ ++ + F+ ++ +F+ F+ Sbjct: 49 DLMSLSMVILTVWISILMIMASKSNNNYKNKIFNFYLLLMMNLLFICFMLENLLMFYLFF 108 Query: 144 EMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAI------LALVFVHY 197 E +L P+ +I+ WG + RI A +YT L +LI + L+++F Sbjct: 109 EAVLFPIILMISGWGSQPE----RIQAGFYMLMYTVFGSLPLLILMLLKNQSLSIIF--- 161 Query: 198 NATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSV 257 W FN G + LM+ + F VK+P+ H WLP AH +AP AGS+ Sbjct: 162 ---NEWLFN---------EMGFIFFLMI---LGFLVKIPMFLFHLWLPKAHVEAPRAGSM 206 Query: 258 DLAGILLKTAAYGLLRFSLPLFPNA---SAEFAPIAMWLGV-IGIFYGAWMAFAQTDIKR 313 LAG+LLK YGL RF F + S I+MW V I IF Q DIK Sbjct: 207 ILAGVLLKLGFYGLYRFKSFFFLDLLKFSFVLIVISMWGAVLISIF-----CLYQNDIKS 261 Query: 314 LIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRM 373 LIAY+SVSHMG L T G ++ MI HGL ++GLF L +YER+HTR + M Sbjct: 262 LIAYSSVSHMGITLAGCVTFQLHTSFGMLMMMIGHGLCSSGLFCLKNMIYERLHTRSIMM 321 Query: 374 MGGLWSKMKWLPALSL---FFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLV 430 + G+ + P LS+ F++ + P T N GE + G + ++++ + Sbjct: 322 IKGMIN----FPNLSMWWFLFSIINMSAPMTMNLFGELFLGLGLMKYSLLLSLPVMMMIF 377 Query: 431 FASVYSLAMLHRAYFGKAKS-QIASQELPGMSLRELFMILLLVV 473 ++ YS+ M +Y +S I S ++ +S+RE +++LL ++ Sbjct: 378 LSACYSMFM--YSYINHGQSWMIFSNKM--ISMREYYLMLLHII 417 >UniRef50_C7DIL9 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIL9_9EURY Length = 466 Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 95/348 (27%), Positives = 190/348 (54%), Gaps = 14/348 (4%) Query: 71 WIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGV 130 +IP GI + I+ +++++++++ ++ + + E ++ + L L++ + G+ Sbjct: 62 YIPSLGIGLSFRINFIAIVLLIMSSIVLLATSVAGNPERDRTRLSSSLILLFQIAAA-GL 120 Query: 131 FLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAIL 190 F + ++F+FF FW++ ++ M+F+I + G R A+ +F I+ + +++L+ I+ Sbjct: 121 FTSANLFMFFIFWDIGVIAMFFMINILG-----SANRKIASMEFLIFEIFASMMLLLGII 175 Query: 191 ALVFVHYNATGVWTFNYEELLNTP--MSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAH 248 L F T + N + T + + ++ ++ + F+AF V MP+ P H WLPDAH Sbjct: 176 VLYFY----TPGHSLNITTITQTAAALPASIQEIIFVLLFLAFMVNMPLFPTHFWLPDAH 231 Query: 249 SQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQ 308 S+A T GS+ L+G+L K +G+L + P A + + +A L VI IFY ++ Q Sbjct: 232 SEASTQGSMLLSGVLTKFGGFGMLLL-FEMLPIAQSAYIYVA-GLAVISIFYSIFVLMRQ 289 Query: 309 TDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHT 368 D+KR++AY+++ MG V++ I + GA+ M++HG++ A LF++ G ++ Sbjct: 290 NDMKRIVAYSTIVEMGIVMLGISALNTFGTNGALYLMLSHGVTIALLFLVVGSMHYIFGD 349 Query: 369 RDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ 416 RD+R + G+ S + +A G+P T F+ + ++ G+ Q Sbjct: 350 RDIRSLRGVVSGAASSAYAFVAGILAMTGVPLTSGFIADLLLFIGAEQ 397 >UniRef50_Q9ZY24 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Pedinomonas minor RepID=Q9ZY24_PEDMN Length = 478 Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 114/369 (30%), Positives = 195/369 (52%), Gaps = 19/369 (5%) Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 +L+ I ++ F++ D+ FF +E +L+P+++++ +G +++ +I AA I T Sbjct: 110 SLISIFIALLFTFISQDLLTFFIGFEFVLIPLFWIVIEFGSRSN----KIFAAFFIVILT 165 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 LI + +F+ ++ FN+ + +S + + + F+ VK+P++ Sbjct: 166 LFGSCFFLIGFFS-IFLEISSLN---FNFLSFSLSYLSESRQSFIWIFLFLGLMVKVPLI 221 Query: 239 PLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 PLH WLP+AH +APT GSV LAG++LK YGL+R + LF N I G + + Sbjct: 222 PLHLWLPEAHGEAPTVGSVLLAGVVLKLGTYGLIRCLVFLFSNVEVFIGSILFAYGFLNM 281 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFIL 358 + A ++ Q DIK+ IAY S++H+G V+I + + G+VI +I HGL + LF L Sbjct: 282 VFAALISIRQLDIKKAIAYGSIAHIGTVVIGLSEVFNFSEFGSVIIIIFHGLVSPLLFFL 341 Query: 359 CGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAV-ATLGMPGTGNFVGEFMILFGSFQV 417 G LY+R TR++ G L + + L +++ F AV + PGTG+FVGE I + Sbjct: 342 VGSLYDRFGTRNIYYFGSL-ALISPLFSVNWFLAVLGNVAFPGTGSFVGEITIFISLLFM 400 Query: 418 VPVITVISTFGLVFASVYSLA----MLHRAYFGKAKSQIASQELPGMSLRELFMILLLVV 473 P ++ LVFA+ +LA ++ R F + + +SL+E + LLL + Sbjct: 401 NPFCGIL----LVFATFANLAWNFLLITRVVFLHYQINYLTF-FYDISLKEFVIFLLLNI 455 Query: 474 LLVLLGFYP 482 L + G + Sbjct: 456 LSIFSGLFA 464 >UniRef50_B2A694 NADH dehydrogenase (Quinone) n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A694_NATTJ Length = 748 Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 137/431 (31%), Positives = 208/431 (48%), Gaps = 57/431 (13%) Query: 2 LLPWLIL-IPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 +LP LI+ +P +G F K+ +I + L L L Y L Q GI Sbjct: 14 ILPILIIFVPLLGSFGVILISSVSEKLRDIYTVIISAVPLVL-----LAVMYPLVQQ-GI 67 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI--EKYQGFFHL 118 Q+ E W G+ L D L L L L+ LA L + + I E + F+ Sbjct: 68 VQYNIE----WFLEIGLIFRL--DSLGFLFTALISLIWFLATLYATEYISHEHNRNRFYF 121 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 ++ G +GVF+ D+F F F+EMM + Y L+ H+ + K + A F Sbjct: 122 FWLFTFGATLGVFVTGDLFGLFVFFEMMSLTSYVLVI---HE--EDKDAMRAGNLFLFLG 176 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPM-----SSGVEY-LLMLGFFIAFA 232 GL AIL +F+ Y FN E L PM ++GV +L+L F I F Sbjct: 177 IGGGL----AILFGLFIMY-------FNLETLEIAPMLGDMVAAGVNIPVLLLLFIIGFG 225 Query: 233 VKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAM- 291 +K +VPLH WLP AH APT S L+G+L+KT YGL R L + AS++ + Sbjct: 226 IKAGIVPLHIWLPKAHPVAPTPASAILSGLLIKTGVYGLWRVFLMVMGPASSQEVELYQQ 285 Query: 292 ----------WLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLI----AIYTGSQ-- 335 W+G+I + GA MA QT K+++AY+SVS +GF+++ A+Y G+ Sbjct: 286 YITNWGMGLFWIGIITMVLGALMALLQTSAKKMLAYSSVSQVGFIIMGLGAAVYLGTDGP 345 Query: 336 LAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVAT 395 + + G ++ +I H L A LF++ G ++ R H D+ + G++ +M P + + F +A Sbjct: 346 IGFAGGIMHVINHALFKACLFLIVGAIFIRTHLLDIDRVRGMFKQM---PFMGIAFIIAA 402 Query: 396 LGMPGTGNFVG 406 LG+ G F G Sbjct: 403 LGIAGVPLFNG 413 >UniRef50_A1YWB8 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Cephalothrix rufifrons RepID=A1YWB8_9BILA Length = 437 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 120/377 (31%), Positives = 190/377 (50%), Gaps = 19/377 (5%) Query: 83 IDGLSLLMVVLTGLLGVLAVLCSWKEI-EKYQGFFHLNLMWILGGVIGVFLAI-DMFLFF 140 +D LS MV+L+ LG L +L S+K + L + +L + V +I ++FLF+ Sbjct: 44 VDSLSFWMVMLSLWLGGLMILASYKVLFNNLDSNIFLYSLLLLIFFLLVTFSISNIFLFY 103 Query: 141 FFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNAT 200 F+E L+P LI WG++ R+ A+ +YT + L +LI + FV + Sbjct: 104 IFFEFSLIPTMVLILGWGYQPE----RLQASIYMMMYTVTASLPLLIGL----FVIFFKV 155 Query: 201 GVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLA 260 G ++F E N S+ + L+ L +AF VK+P+ H WLP AH +AP +GS+ LA Sbjct: 156 GSYSFLMEW--NIFFSTLMNVLICLILMLAFLVKLPIYFFHLWLPKAHVEAPVSGSMILA 213 Query: 261 GILLKTAAYGLLRFSLPLFPNASAE---FAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAY 317 G+LLK YGL+R +F + + +++W G++ F + Q D+K LIAY Sbjct: 214 GVLLKLGGYGLMRXMSKMFFSFTFFSEFLISLSLWGGIVTGF----ICLRQVDMKALIAY 269 Query: 318 TSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGL 377 +SV HMG +++ +++GS + + G+ I MI+HGL + LF L YE IH+R + M GL Sbjct: 270 SSVGHMGLLIVGLFSGSLIGWIGSFIVMISHGLCSPALFALANVNYESIHSRGLLMNKGL 329 Query: 378 WSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSL 437 + + F + P + N VGE M++ V + + A YSL Sbjct: 330 MNIYSSMTIWWFLFCAFNMAAPPSLNLVGELMLIMSGLSVSWIFSFCLGMMSFLAGAYSL 389 Query: 438 AMLHRAYFGKAKSQIAS 454 + GK S S Sbjct: 390 YLYTSVQHGKMLSLYCS 406 >UniRef50_B5T2Z3 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Nasonia vitripennis RepID=B5T2Z3_NASVI Length = 446 Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 105/325 (32%), Positives = 172/325 (52%), Gaps = 26/325 (8%) Query: 134 IDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALV 193 I+ F+F+ ++E+ L P + LI WG++ RI A+ +YT + L ++I IL + Sbjct: 106 INYFMFYLYFEISLFPTFLLIMGWGYQPE----RINASMFMLLYTMFASLPLMI-ILFYL 160 Query: 194 FVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFI-AFAVKMPVVPLHGWLPDAHSQAP 252 ++N + NY +LN M LLM + I AF +K+P+ LH WLP AH +AP Sbjct: 161 LSYFN-----SLNYLIILNNTMKFTYLKLLMYLYMIFAFLIKLPLFMLHMWLPKAHVEAP 215 Query: 253 TAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIK 312 GS+ LAG++LK YG++R S+ + N S F I + ++G+F + + Q D+K Sbjct: 216 ICGSMILAGVMLKLGGYGIIR-SMMMMLNYSKYFNYIITIISLLGMFMLSVICLRQYDLK 274 Query: 313 RLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMR 372 L+AY+SV HMG +L+ + ++ G+ + M+AHGL ++ LFIL Y+ +R+M Sbjct: 275 LLVAYSSVVHMGMMLLGAMSLTKWGMVGSYLMMMAHGLCSSALFILVNLSYKCSKSRNML 334 Query: 373 MMGGLWSKMKWLPALSL---FFAVATLGMPGTGNFVGEFMI----LFGSFQVVPVITVIS 425 + G+ M P LS+ F + + P + N + E MI L SF + ++ Sbjct: 335 INKGM---MNMFPTLSMWWFLFCICNMSSPVSLNLMSEIMIINVMLNWSFNSIYLLMA-- 389 Query: 426 TFGLVFASVYSLAMLHRAYFGKAKS 450 + +S+YSL M + G S Sbjct: 390 --SMYLSSMYSLYMFSYSQHGAYNS 412 >UniRef50_Q2ABJ4 NADH-ubiquinone oxidoreductase chain 4 n=17 Tax=Protostomia RepID=Q2ABJ4_SEPLE Length = 457 Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 106/330 (32%), Positives = 168/330 (50%), Gaps = 28/330 (8%) Query: 131 FLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAIL 190 FL+ + F+ F+E+ L+P LI WG++ R+ A +YT ++ L +L+A++ Sbjct: 103 FLSAHIMYFYIFFEISLIPTLMLIIGWGYQPE----RLQAGVYMMLYTISASLPLLVALV 158 Query: 191 AL--VFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAH 248 + V YN V L N + L LG AF VK+P+ +H WLP AH Sbjct: 159 LISSVIGSYNMLLV-----SYLSNIGLMYKANVLWFLGVMGAFLVKLPMFSVHLWLPKAH 213 Query: 249 SQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNA---SAEFAPIAMWLGVIGIFYGAWMA 305 +AP AGS+ LAG+LLK YG+LR F N S+ F +++W GV+ A + Sbjct: 214 VEAPIAGSMILAGVLLKLGGYGVLRMLYTYFLNNLLLSSVFIVLSIWGGVVT----AGIC 269 Query: 306 FAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYER 365 Q+DIK LIAY+SV HMG +L T ++G ++ MI+HG ++GLF L +YE+ Sbjct: 270 VGQSDIKSLIAYSSVGHMGLMLGGCLTKFMWGWEGGMLMMISHGFCSSGLFCLANLMYEK 329 Query: 366 IHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMI-----LFGSFQVVPV 420 + +R + + GG+ + + F + +G P N V E M+ ++ S+ ++ + Sbjct: 330 LKSRSLYLCGGMVNVSPVVCLWWFLFCIGNMGAPPFINLVSEVMLFCCMYMYSSWFIITI 389 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKS 450 I ++ GL Y+L M G S Sbjct: 390 IIMVFVGGL-----YNLVMFVSTQHGSIMS 414 >UniRef50_Q71S52 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Ophiopholis aculeata RepID=Q71S52_OPHAC Length = 452 Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 94/272 (34%), Positives = 142/272 (52%), Gaps = 19/272 (6%) Query: 140 FFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNA 199 F +E L+P +LI WG + + RI A F YT S L + ++++ + Y++ Sbjct: 118 FLGFEGTLIPTLYLITRWGAQ----QERIEAGLYFVFYTLVSSLPLFLSLIHI----YSS 169 Query: 200 TGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDL 259 + N + + S + L + +AF VK+P+ LH WLP AH +AP AGS+ L Sbjct: 170 NHHLSINLSSIQSLGNISNISALFCM---LAFLVKVPIFSLHLWLPKAHVEAPVAGSMIL 226 Query: 260 AGILLKTAAYGLLR----FSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLI 315 A +LLK YG +R F LP S P W G++ + + Q+D+K LI Sbjct: 227 AAVLLKMGGYGFIRLTSLFYLPFNTFISTILIPFCCWGGLLT----SLICLTQSDLKSLI 282 Query: 316 AYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMG 375 AY+SVSHM F++ I + A+ G I MIAHG+ ++ LF L YER +TR + + Sbjct: 283 AYSSVSHMSFMVAGISVLTSWAFAGGSIVMIAHGVVSSALFCLANTFYERTNTRTLIVSR 342 Query: 376 GLWSKMKWLPALSLFFAVATLGMPGTGNFVGE 407 G+ + LP + L FA A +G+P N +GE Sbjct: 343 GIKTMFSILPIVWLVFAAANMGIPPLPNSIGE 374 >UniRef50_Q642W5 NADH-ubiquinone oxidoreductase chain 4 n=6 Tax=Protostomia RepID=Q642W5_9ANNE Length = 453 Score = 145 bits (366), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 114/391 (29%), Positives = 193/391 (49%), Gaps = 23/391 (5%) Query: 69 MPWIPRFGI--SIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF--FHLNLMWIL 124 +P+I I + +L++D LS +++LT L +L S + Q F LN++ + Sbjct: 37 LPYISSMNILATENLSLDSLSFPLILLTLWTSALMILASINILLNNQASKSFCLNILLLN 96 Query: 125 GGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLV 184 + +F + F+F+ F+E+ L+P FLI WG++ R+ A +YT + L Sbjct: 97 LTLFVMFSLNNYFMFYIFFEVSLIPTLFLILGWGYQPE----RLQAGLYLVLYTVTASLP 152 Query: 185 MLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLM--LGFFIAFAVKMPVVPLHG 242 +L++I + + Y ++ F LNT + ++ M + +AF VKMP+ H Sbjct: 153 LLMSI---IMIMYKNNSLFMF-----LNTYSPPTIYFINMWWIMSIMAFMVKMPLYTTHL 204 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMW---LGVIGIF 299 WLP AH +AP AGS+ LAGILLK +YG++R + P + ++ F I+M + V+G Sbjct: 205 WLPKAHVEAPVAGSMILAGILLKLGSYGVIRLATPFW--WTSTFTSISMMFTSISVMGAI 262 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 + Q D+K LIAY+SV HMG ++ + + ++ ++ M+AHGL ++ LF+L Sbjct: 263 ITGLICLRQPDLKALIAYSSVGHMGLIIAGFMSNTSWGWEASLTMMVAHGLCSSALFVLA 322 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP 419 YE +R M + G+ S + A A +G P + N V E +L + Sbjct: 323 NMTYETTQSRSMFLNKGMLSMFPIMALWWFMMASANMGAPPSLNLVSEVSLLASILNLSK 382 Query: 420 VITVISTFGLVFASVYSLAMLHRAYFGKAKS 450 + + + +YSL M G S Sbjct: 383 SFIIPMILSMFISGMYSLIMYTTTQHGTPTS 413 >UniRef50_D1FMY6 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Whitmania pigra RepID=D1FMY6_9ANNE Length = 444 Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 108/353 (30%), Positives = 185/353 (52%), Gaps = 27/353 (7%) Query: 83 IDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGV--FLAIDMFLFF 140 ID +S L+++LT + ++ V+CS+K + K + + +L ++ + F +++ LF+ Sbjct: 55 IDSVSFLLIMLTMWVCIMMVICSFKYLYKCMEYNLFLKLTLLLMLVLLMSFSQVNIVLFY 114 Query: 141 FFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNAT 200 +E L+P +LI WG++ R+ A+ +YT L ML IL F+ Y Sbjct: 115 ILFEFSLIPTMWLIMKWGYQPE----RLQASLYLVMYTVMGSLPMLCCIL---FMGYCNG 167 Query: 201 GVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLA 260 + F + +N + +LGF VK+P+ P H WLP AH +AP +GSV LA Sbjct: 168 SLSFFMWPVFVNMYFIESWWLMFLLGFL----VKLPMYPFHLWLPKAHVEAPVSGSVILA 223 Query: 261 GILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSV 320 ILLK YG++R L L+P + P+ + ++G +++ Q D+K LIAY+SV Sbjct: 224 SILLKLGGYGIIRMGL-LYPWLNLSMIPMLLSFSLLGGVVSSFICLRQIDLKSLIAYSSV 282 Query: 321 SHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSK 380 SHMG +L+ + ++ G+++ M++HG S++ LFI+ Y+ ++R + + G Sbjct: 283 SHMGLMLMGALSSCKIGLFGSMMMMVSHGFSSSALFIMANMNYDSCNSRSILVCKG---T 339 Query: 381 MKWLPALSLF---FAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLV 430 + +P +SLF F++ + P N V E I+ IT IS+ LV Sbjct: 340 LLVVPMVSLFWFLFSIMNMAAPPFINLVSEISIMMS-------ITFISSGSLV 385 >UniRef50_B3TJZ1 NADH-ubiquinone oxidoreductase chain 4 n=2 Tax=Polychaeta RepID=B3TJZ1_9ANNE Length = 453 Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 105/330 (31%), Positives = 176/330 (53%), Gaps = 12/330 (3%) Query: 84 DGLSLLMVVLTGLLGVLAVLCSWKEI--EKYQGFFHLNLMWILGGVIGVFLAIDMFLFFF 141 DGL + +++LT + L ++ S+K FF +NL+++ ++ F+ + +F+ Sbjct: 58 DGLGVPLIILTLWISGLMLMSSFKIYLSSDMVKFFFVNLIFLNNILMLCFMCSNFVMFYI 117 Query: 142 FWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATG 201 +E L P +I +WG++ R+ A+ F IYT ++ L +L+ L +VF+ ++ Sbjct: 118 LFESSLFPTMIMILVWGYQ----PERLQASFYFVIYTVSASLPLLVG-LMMVFMENSSLS 172 Query: 202 VWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAG 261 + L P+ V L F +AF VK+P+ +H WLP AH +AP AGS+ LA Sbjct: 173 MILI----LWGCPIFFKVSGLWWFVFILAFLVKLPLYTVHLWLPKAHVEAPVAGSMILAA 228 Query: 262 ILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVS 321 ILLK +YG+LR S+ L+P S L ++G + + Q D+K +IAY+SV Sbjct: 229 ILLKLGSYGMLRVSV-LYPIFSLSVLSFLGSLCMVGACISSAICLRQPDMKSMIAYSSVG 287 Query: 322 HMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKM 381 HMG V+I + + S + GA+ M+AHGL ++ LF + +YE I +R + ++ GL S Sbjct: 288 HMGLVIIGVLSCSSWGWCGALGLMVAHGLCSSALFSVANMVYESISSRSLVLIKGLISIF 347 Query: 382 KWLPALSLFFAVATLGMPGTGNFVGEFMIL 411 + F V + P + N GE ++L Sbjct: 348 PCMSIWWFFLCVGNMSGPPSFNLFGEILLL 377 >UniRef50_Q0H2F4 NADH-ubiquinone oxidoreductase chain 4 n=5 Tax=Endopterygota RepID=Q0H2F4_9HYME Length = 447 Score = 144 bits (364), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 94/284 (33%), Positives = 157/284 (55%), Gaps = 19/284 (6%) Query: 130 VFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAI 189 VF +D F+F+ F+EM ++PM +I WG++ R+ A +YT S L +++ + Sbjct: 106 VFSLMDYFMFYLFFEMSMIPMLIMILGWGYQPE----RVQAGMYLLLYTFMSSLPLMLCM 161 Query: 190 LALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHS 249 L + + Y + NY LLN + + + + F F VK+P +H WLP AH Sbjct: 162 LMIYYEMY------SLNYMFLLNNNLMNNFIFYFFMIF--VFLVKLPSYLVHLWLPKAHV 213 Query: 250 QAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQT 309 +AP GS+ LA I+LK YG++R SL + + + ++ + M L V+G Y + + Q Sbjct: 214 EAPVFGSMILAAIMLKLGGYGMIR-SLMMMMSLNKMYSFLLMSLSVVGSMYLSMICMQQV 272 Query: 310 DIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTR 369 DIK L+AY+SV HMG V++ +++ S + + G + MI HGL ++GLF L Y+R+++R Sbjct: 273 DIKMLVAYSSVVHMGMVILGVFSMSYMGFMGGYMLMIGHGLCSSGLFCLVNLSYKRLNSR 332 Query: 370 DMRMMGGLWSKMKWLPALSL---FFAVATLGMPGTGNFVGEFMI 410 + + G+ S M P++S+ + L P + N +GE I Sbjct: 333 SILLNKGMLSCM---PSMSMWWFMLCSSNLTSPPSLNLLGELFI 373 >UniRef50_A6MVM1 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Myzostoma seymourcollegiorum RepID=A6MVM1_MYZSE Length = 447 Score = 144 bits (364), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 111/397 (27%), Positives = 207/397 (52%), Gaps = 22/397 (5%) Query: 64 QSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQG--FFHLNLM 121 + F+ + F I+ L IDG S+L+++L+ + ++ +L + K +K F L M Sbjct: 38 NTLFNNLYTQVFLINKFLLIDGSSILLILLSMWIIIMMILGTKKISDKNNNWVMFMLMNM 97 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 +L + F + ++ +F+FF+EM L+P+ F+I +WG++ R+ A+ +YT + Sbjct: 98 IMLLALYLCFSSKNLSMFYFFFEMTLIPITFMIMIWGYQPE----RLNASIFMLMYTVIA 153 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 L + I I+ + + N + ++ FN + ++N+ ++ + L FIA VK+P+ +H Sbjct: 154 SLPLSINIVMMKNNNMNISFMYFFN-QIMVNSNFNTMIN----LFMFIALLVKLPMFFMH 208 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPL-FPNASAEFAPIAMWLGVIGIFY 300 WLP AH +AP GS+ LA ILLK +G++R L L N I++W G Sbjct: 209 MWLPKAHLEAPVFGSMILAAILLKLGGFGMMRMMLILPMSNMFLYLCIISIW----GAMI 264 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 + + TDIK LIAY+SV+HMG +++A++ + ++ A MIAH +++ LF + Sbjct: 265 ISLICCRMTDIKMLIAYSSVAHMGMLIMALFLNTPISLMAAFFMMIAHAFTSSALFFVAN 324 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALS---LFFAVATLGMPGTGNFVGEFMILFGSFQV 417 +Y T + RM S + + P+L+ + ++ P + N + E +++ + Sbjct: 325 SMYT---TSNSRMFILNKSMLMYNPSLTKWWFIIILMSMATPPSINLISEMLLVSSLIKY 381 Query: 418 VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIAS 454 I + F L+ + VYS+ M G++ + + S Sbjct: 382 TVFIMLPLGFMLMLSVVYSMIMYVNTTHGQSLNMMNS 418 >UniRef50_B1L375 NADH:ubiquinone oxidoreductase subunit 4 (Chain M) n=2 Tax=Archaea RepID=B1L375_KORCO Length = 507 Score = 144 bits (363), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 117/366 (31%), Positives = 182/366 (49%), Gaps = 32/366 (8%) Query: 106 WKEIEKYQG--------FFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALW 157 ++E+EK +G +F L +M+ ++G L+ ++ F+ F E+ L+P + LIA + Sbjct: 107 FEEMEK-EGQRPASWGIYFMLYVMFS-AAMMGTVLSTNLVEFYLFLEVSLLPSFLLIAFY 164 Query: 158 GHKASDGKTRITAATKFFIYTQASGLVMLIAIL-----ALVFVHYNA-TGVWTFNYEELL 211 G+ + RI A + I+T L LI L A F +N GV ELL Sbjct: 165 GYGR---RERI--ALLYLIWTHVGALAFLIGALLLGLNARTFDFFNPIKGVANMGLGELL 219 Query: 212 NTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGL 271 M V +++G F VKM V +H WLP AH++APT S L+ L+ A Y L Sbjct: 220 PEAMRMPVFIAILIGLF----VKMAVFGVHIWLPYAHAEAPTPVSALLSPNLIGIAGYAL 275 Query: 272 LRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIY 331 +R + LFP+ A +P + L ++ I YG MA AQ D KR +AY+SVS MG++L+ + Sbjct: 276 IRIAYVLFPSDFASISPYLLGLALLTIIYGGLMALAQDDFKRFLAYSSVSQMGYLLMGVA 335 Query: 332 TGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIH-TRDMRMMGGLWSKMKWLPALSLF 390 + + L GA++ AH + A LF G L ++H R + MGGL +KM AL+L Sbjct: 336 SVTSLGMAGALLHYAAHAVGKALLFATAGVLITQLHGLRSISKMGGLATKMPMTAALALI 395 Query: 391 FAVATLGMPGTGNFVGEFMILFGSFQVV------PVITVISTFGLVFASVYSLAMLHRAY 444 + G+P + E +IL G + +I + G+ ++ YS + R + Sbjct: 396 GFMHITGVPPSLGLWSEILILAGVSDLAMRIGQFTLIVALLLVGIGLSTAYSFVTMRRIF 455 Query: 445 FGKAKS 450 FG Sbjct: 456 FGHESE 461 >UniRef50_P18931 NADH-ubiquinone oxidoreductase chain 4 n=322 Tax=Protostomia RepID=NU4M_DROME Length = 446 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 107/328 (32%), Positives = 170/328 (51%), Gaps = 22/328 (6%) Query: 131 FLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAIL 190 F ++ +F+F+ F+E L+P FLI WG++ R+ A YT L MLI I Sbjct: 104 FSSMSLFMFYLFFESSLIPTLFLILGWGYQPE----RLQAGLYLLFYTLLVSLPMLIGIF 159 Query: 191 ALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQ 250 Y+ + + N+ + N + + Y +L AF VKMP+ ++ WLP AH + Sbjct: 160 ------YSMNKIGSMNFYLMNNFMFNYDLLYFCLL---CAFLVKMPMFLVYLWLPKAHVE 210 Query: 251 APTAGSVDLAGILLKTAAYGLLR-FSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQT 309 AP +GS+ LAGI+LK YG+LR S N F I+ + ++G + + QT Sbjct: 211 APVSGSMILAGIMLKLGGYGMLRVISFLQLMNLKYSFVWIS--ISLVGGVLVSLVCLRQT 268 Query: 310 DIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTR 369 D+K LIAY+SV+HMG VL + T + G+ MIAHGL ++GLF L YER+ +R Sbjct: 269 DLKALIAYSSVAHMGIVLSGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSR 328 Query: 370 DMRMMGGLWSKMKWLPALSL---FFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVIST 426 M + GL + ++P+++L + A + P T N +GE +L + ++ + Sbjct: 329 SMLINKGL---LNFMPSMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWISMILLS 385 Query: 427 FGLVFASVYSLAMLHRAYFGKAKSQIAS 454 F F++ Y+L + + GK S + S Sbjct: 386 FLSFFSAAYTLYLYSFSQHGKLFSGVYS 413 >UniRef50_B0K5U2 NADH dehydrogenase (Quinone) n=6 Tax=Thermoanaerobacter RepID=B0K5U2_THEPX Length = 486 Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 120/432 (27%), Positives = 220/432 (50%), Gaps = 31/432 (7%) Query: 71 WIPRFGISIHLAIDGLSLLMVVL--TGLLGVLAVLCSWK-EIEKYQGFFHLNLMWIL-GG 126 WIP GI ++ D LS+ M L + L +L S+K EI + + ++ L+ IL G Sbjct: 64 WIPPIGIELY--ADKLSVFMATLFLSCALLILVSFESFKYEIGEEKAAYYFMLVSILIGA 121 Query: 127 VIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVML 186 ++G+ D+F + F E+ + +I++ K + + AA K+FI + + +L Sbjct: 122 MLGIIFTRDLFNLYVFVEITTIAACGIISIKNEKKA-----VEAALKYFILSSIASTSIL 176 Query: 187 IAILALV----FVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 + ++ + ++HY+ +++ + SG L++ GF ++K + PLH Sbjct: 177 LGLILIYNIGGYLHYDTLKSVLLESKDVF-PKIISGSLVLIISGF----SLKSALFPLHI 231 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFP---NASAEFAPIAMWLGVIGIF 299 WLPDAHS APT S L+G+++K + ++R +F ++ + + LG +G+F Sbjct: 232 WLPDAHSAAPTTSSALLSGLVIKVYVFAIIRLLNDVFGLMYTYTSILLEVLLALGNVGVF 291 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 GA +A Q DIKR +AY+SVS MG+V + + +Q ++GA++Q++ H L+ +GLF+ Sbjct: 292 SGAVLAGFQNDIKRRLAYSSVSQMGYVFLGLGFNNQYGFEGALLQVLNHALAKSGLFLAA 351 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATL---GMPGTGNFVGEFMILFGSFQ 416 G + + TRD++ GL LP +L F+V + GMP T F+ ++ + + + Sbjct: 352 GWMVKFTGTRDIK---GLEKISDKLPLTALCFSVCAMSLVGMPFTLGFLSKWHLAMAAIE 408 Query: 417 V-VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLL 475 P+ + + Y ++ +A+ G KS E + L IL+ ++ Sbjct: 409 SGRPLQLIFIILSALLTLSYYFPIIVKAFTGD-KSFERKLEFEKIKGGSLISILIFTFVI 467 Query: 476 VLLGFYPQPILD 487 + LG YP+ +L Sbjct: 468 MFLGIYPKFLLK 479 >UniRef50_B1B1X6 NADH-ubiquinone oxidoreductase chain 4 n=2 Tax=Loxosomatidae RepID=B1B1X6_9BILA Length = 447 Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 107/354 (30%), Positives = 182/354 (51%), Gaps = 21/354 (5%) Query: 77 ISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKY--QGFFHLNLMWILGGVIGVFLAI 134 +S ++D +S +++L+ +L +L S+ +K + F ++++ ++ + FL Sbjct: 49 LSFSFSLDSMSTNLIILSFWCSLLMILGSFYISKKKLDEMLFLISVVILMIILFLSFLMT 108 Query: 135 DMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVF 194 ++ +F+ +E+ LVP ++LI WG++ RI A+ +YT + L +LI ++ + Sbjct: 109 NLLMFYICFELSLVPTFYLIMKWGYQPE----RIQASLYMLLYTICASLSLLITMVEMN- 163 Query: 195 VHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTA 254 ++ + F++E + SG LML FF VKMP+ H WLP AH +AP A Sbjct: 164 -NHLISLSMVFSFEPKTGYYVHSGYAIFLMLAFF----VKMPLYFTHLWLPKAHVEAPVA 218 Query: 255 GSVDLAGILLKTAAYGLLR---FSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDI 311 GS+ LAG+LLK +YGL+R F S F +++ GV+ + + Q+D+ Sbjct: 219 GSMVLAGVLLKLGSYGLIRVMSFCYLFMYKYSEVFMSVSLVGGVLT----SMICVVQSDL 274 Query: 312 KRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDM 371 K LIAY+S+ HMG + I + S GAVI M+AHGL ++G+F L Y+ +R + Sbjct: 275 KSLIAYSSIGHMGVLTGGILSMSWFGIVGAVIMMVAHGLCSSGMFFLSNTYYQNSKSRSV 334 Query: 372 RMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFG--SFQVVPVITV 423 M G+ ++ S + P + N GE ++ G SF V I V Sbjct: 335 LMNKGVLHAFPFMVMFSFLVFSCNMSAPPSINLAGELILCMGILSFSYVSAIPV 388 >UniRef50_A2CL32 NADH-ubiquinone oxidoreductase chain 4 n=27 Tax=Protostomia RepID=A2CL32_CONTE Length = 460 Score = 142 bits (357), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 122/399 (30%), Positives = 197/399 (49%), Gaps = 62/399 (15%) Query: 78 SIHLAIDGLSLLMVVLT---GLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAI 134 S ++ D +SL+++ LT L+ +LA S K + F +M + ++ FL Sbjct: 53 SYFMSYDSMSLMLISLTLWISLMMMLASQSSVKLSKNNDSIFSQLIMSMNLILMLTFLCS 112 Query: 135 DMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVF 194 + LF+F +E L+P LI WG++ R+ A IYT A+ L +L I Sbjct: 113 NSLLFYFLFEASLIPTLMLILGWGYQPE----RLQAGMYMMIYTVAASLPLLFCI----- 163 Query: 195 VHYNATGVWT----FNYEELLNTPMSSGV---EY-----LLMLGFFIAFAVKMPVVPLHG 242 VW F E L+++ + +Y LL + F AF VK+P+ +H Sbjct: 164 -------VWASHKIFCSEMLISSTLRLHAILPQYMWQWSLLGILVFAAFLVKLPMFSVHL 216 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFS-----LPLFPNASAEFAPIAMWLGVIG 297 WLP AH +AP AGS+ LA ILLK YG+LRF +PL+ + IAMW G+I Sbjct: 217 WLPKAHVEAPVAGSMVLAAILLKLGGYGILRFFQYFNFIPLY--SLVILFSIAMWGGMIT 274 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 + + F Q D+K LIAY+S+ HM +L ++ S + GA+I M++HG ++ LF Sbjct: 275 ----SIICFRQVDLKSLIAYSSIGHMSLMLAGAFSNSSWGWSGALILMLSHGFCSSALFA 330 Query: 358 LCGQLYERIHTRDMRMMGGLWSKMKWLPALSL---FFAVATLGMPGTGNFVGEFMILFGS 414 L YE+ TR + + G+ + +LP+L++ F + + P + N +GE MI Sbjct: 331 LANYTYEKTQTRSLLLNKGM---LMFLPSLTMWWFLFCIINMAAPPSINLLGEIMIF--- 384 Query: 415 FQVVPVITVISTFGLV-------FASVYSLAMLHRAYFG 446 P + S++ L+ F+++YS+ + + G Sbjct: 385 ----PAVIFSSSYCLLPLAFMSFFSALYSMYLFTTIHHG 419 >UniRef50_Q3AB32 Carbon monoxide-induced hydrogenase, membrane anchor subunit n=2 Tax=Clostridia RepID=Q3AB32_CARHZ Length = 1274 Score = 141 bits (356), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 134/498 (26%), Positives = 237/498 (47%), Gaps = 68/498 (13%) Query: 4 PW--LILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 PW L+L+P++GGF+ + F + +A+ G T+ L+ WL G + Sbjct: 237 PWSSLVLVPYVGGFIVYLAGCFSQALRNILAVGITGTTVYLT---WLAGNF--------- 284 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCS--WKEIEKYQGFFHLN 119 D LS +L +G L L S + + + Y + Sbjct: 285 ----------------------DSLSKFFALLMAFIGFLVTLYSVGYFKAKPYANRYFFF 322 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 L+ +LG ++G+ + ++ F+ FWE+M YFL+ + + A K+FI Sbjct: 323 LLLMLGTLLGLTTSKELGNFYVFWELMTWTSYFLVI-----QEQTQKALRAGFKYFIMCT 377 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 + +ML+AIL L V + + T + + +P G+ +++ F I F VK +VP Sbjct: 378 SGAYIMLLAILTL-HVKLGSLDLTTISANLQVLSP---GLMLVVLGMFIIGFGVKAGLVP 433 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFP-------NASAEFAPIAMW 292 LH WLPDAH AP++ S ++GIL KT YGL+R +F + +F+ I Sbjct: 434 LHSWLPDAHPVAPSSISAPMSGILTKTGIYGLVRILFVVFGVSLLTKVGTTGQFSTIGFI 493 Query: 293 LGVIGIF---YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHG 349 + ++G F YG MA QTD+K+++AY++++ +G ++I + G+ L++ GA+ ++ H Sbjct: 494 ISLLGAFTLLYGEIMALLQTDVKKMLAYSTMAQVGEIVITLGVGTYLSFIGALYHILNHA 553 Query: 350 LSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAV---ATLGMPGTGNFVG 406 + LF+ G L R+ ++++ + G+ M P SL F++ A +G+P F+ Sbjct: 554 IMKNLLFLAVGALILRVKSQEINKLKGIGRVM---PVTSLCFSIGILAIMGLPPFNGFIS 610 Query: 407 EFMILFGSFQVVPVITVISTFGL-VFASVYSLAMLHRAYFGKAKSQIASQELPGMSLREL 465 +F++L+ Q + + Y L ++ +F K + A QE P + L Sbjct: 611 KFLMLYALVQSGHLALAGLILLGSILGGFYYLKVVRIIFFEKYEGP-ARQEAP---ITML 666 Query: 466 FMILLLVVLLVLLGFYPQ 483 I++L L + G YPQ Sbjct: 667 IPIVILTGLSIFNGVYPQ 684 Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 128/500 (25%), Positives = 217/500 (43%), Gaps = 72/500 (14%) Query: 4 PWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQW 63 P + LIP +G + R VKV W+A+ TM TLA S G+ + Sbjct: 716 PIVTLIPMVGALFAYFFGRRSVKVSGWLAVATMVATLATVF----------AASTGLDIF 765 Query: 64 QSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCS--WKEIEKYQGFFHLNLM 121 F L +GVL +L S + E E Q F+L Sbjct: 766 SRSFAF-----------------------LIAFIGVLNLLYSLGYMEHEHAQNRFYLFFT 802 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLV-PMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 ++GG++GV ++ D+F FF FWE+M +YF+I H+ + R K+FI+ Sbjct: 803 LMIGGLLGVAVSKDLFNFFAFWEIMSSWTLYFVII---HEETSEALR--EGFKYFIFNYV 857 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLN--TPMSSGVEYLLMLGFFIAFAVKMPVV 238 A L L+ + TF EL + + +G+ L ++ I FA+K ++ Sbjct: 858 G------ANLLLLGLLVLTVNAGTFEMSELAGRLSALPTGLVALGLILMLIGFAMKAAML 911 Query: 239 PLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRF-----SLPLFPNASA-----EFAP 288 P APT S ++ +LLK+A +G+++ + L Sbjct: 912 PFRIDYQMHPPTAPTPVSGYISSVLLKSAPFGMVKLFYVFGGVALLSKLGQLGDMPSLMY 971 Query: 289 IAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAH 348 I W+ + I A +A Q+ +KRL+ Y +VS MG++++ I GS L G ++ ++ H Sbjct: 972 ILAWVSGLTILMAAALALLQSGMKRLLIYHTVSQMGYIILGISLGSSLGLAGGLLHLVNH 1031 Query: 349 GLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATL---GMPGTGNFV 405 L LF++ G + + D+ +GG+ KM P FA+ T G+P F Sbjct: 1032 MLFKNLLFLVAGAIMVKTGIGDLDRLGGIGRKM---PVTLSVFAIGTFSIAGIPPFNGFT 1088 Query: 406 GEFMILFGSFQVVPVITVISTFGLVFASVYS-LAMLHRAYFGKAKSQIAS-QELP-GMSL 462 +++I S + V + + ++ S L LH A+FG+ ++ + E P M + Sbjct: 1089 SKWLIYEASMEKGYVFLALLSLLASVLTLASFLKFLHSAFFGQIPKELENVTEAPWTMQI 1148 Query: 463 RELFMILLLVVLLVLLGFYP 482 +++L VL ++ G +P Sbjct: 1149 P----MVILAVLCMVFGIFP 1164 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 23/195 (11%) Query: 312 KRLIAY---TSVSHMGFVLIAIYTGSQLAYQGAVI----QMIAHGLSAAGLFILCGQLYE 364 K LI + +S++ +GFVL+ + TG+ + GA++ Q++ GL +F+ Sbjct: 33 KNLIQFLIISSIAEIGFVLLGLGTGTYVGTSGALLHLEYQIVMRGL----VFLAAAAFIF 88 Query: 365 RIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP-VITV 423 R H+ + + G+ KM L F + +G+ + +F+I++ + + + Sbjct: 89 RGHSASVEKLQGIGRKMPVTTTLFGFGLFSVMGLSPFKGSISKFLIIYAAIESGHWLSAA 148 Query: 424 ISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGM-SLRE-----LFMILLLVVLLVL 477 I+TFG + +VY L + F + QE PG +RE + ++L+L VL L Sbjct: 149 IATFGSIIEAVYFLQVFQILCF-----EDPVQEGPGAEEVRETSPGLMAVLLVLGVLTAL 203 Query: 478 LGFYPQPILDTSHSA 492 +G P+P + + A Sbjct: 204 MGLIPEPFIHGAERA 218 >UniRef50_C1TKY1 Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TKY1_9BACT Length = 487 Score = 141 bits (356), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 139/486 (28%), Positives = 222/486 (45%), Gaps = 36/486 (7%) Query: 5 WLILIPFIGGFLCWQTERFGVK-VPRWIALITMGLTLAL-SLQLWLQGGYSLTQSAGIPQ 62 W IL+P GFL FG K VP + +++G +L SL + + G L+ + G Sbjct: 5 WAILVPLCAGFLLPLLSIFGKKAVPAFT--VSIGAVSSLVSLSVAMSGWEGLSVTLG--- 59 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGV---LAVLCSWKEIEKYQGFFHLN 119 W P GIS L +D +S + L G +G LAV + ++ + Sbjct: 60 -------GWGPELGIS--LVVDRISGTFLTL-GAIGFPLSLAVSTERFGLSPWRFYVIFF 109 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 L W V G+ L D+F F F+E+ V Y +++ + A+ K+ I Sbjct: 110 LSW--ASVNGILLTGDLFNLFVFFEIFSVAAYLMVS----YPPRSWRAVEASLKYLILGT 163 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 L +L+ I + ATG L+ + S ++ F VK VP Sbjct: 164 VGALFLLLGIA----YSFMATGQLNMAALSLVLPSVPSATLAVIAGCIFTGLFVKSGTVP 219 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 H WLPDAHS A T+ S L+G+L+K + YG++R S LF +A P+ G + + Sbjct: 220 THFWLPDAHSSAQTSVSALLSGVLVKVSLYGMIRLSYLLFMDAGIGIMPVMTAFGTLSVI 279 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 G MAF Q D+KRL+AY++V+ +G VL+ I GS L A++ H S GLF++ Sbjct: 280 LGHLMAFQQEDVKRLLAYSTVAQVGTVLVGIGCGSALGISAAILHSFVHMASKMGLFLVS 339 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ--- 416 G L E TR++ M GL+ L F A + G+P F ++ +L + Sbjct: 340 GVLVEDRGTREIAEMRGLFFHRPLFVLLFCFLAASLAGVPPFSGFFSKWYLLRAISEAGY 399 Query: 417 VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLV 476 VVP + ++ G V ++ Y L + RA+F + + ++ R + + +L + L Sbjct: 400 VVPAVVLVG--GTVVSAAYYL-RIARAFFSFSDEPPVHRRPHPVTFRAILFLSILCLALA 456 Query: 477 LLGFYP 482 ++ P Sbjct: 457 VMPLIP 462 >UniRef50_A9X4I8 NADH-ubiquinone oxidoreductase chain 4 n=20 Tax=Mandibulata RepID=A9X4I8_9MYRI Length = 448 Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 105/327 (32%), Positives = 173/327 (52%), Gaps = 15/327 (4%) Query: 84 DGLSLLMVVLTGLLGVLAVLCSWKEIEKYQG-FFHLNLMWILGGVIGVFLAIDMFLFFFF 142 D +SL + +L+ + +L V+ S IE G +F ++ ++ ++GVFL++D+F F+ Sbjct: 56 DMMSLGLTLLSFWIVMLMVVASTSTIESSGGSYFSFLMVVLILLLMGVFLSVDLFSFYLS 115 Query: 143 WEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGV 202 +E +L+P Y LI WG++ R+ A YT + L +LI IL +++ Sbjct: 116 FESVLIPTYILIVGWGYQPE----RLQAGIYLMFYTLLASLPLLIVIL-----FFDSLSG 166 Query: 203 WTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGI 262 + T + + +L + +AF +K+P+ H WLP AH +AP AGS+ LAG+ Sbjct: 167 AALATSLVTVTWTNHWLSVMLYVAGVLAFLIKVPLFLFHLWLPKAHVEAPIAGSMLLAGV 226 Query: 263 LLKTAAYGLLRFSLPLFPNASAEFAPIAMW--LGVIGIFYGAWMAFAQTDIKRLIAYTSV 320 LLK YGL RFS N S +W +G+ G + + + Q+D+K LIAY+SV Sbjct: 227 LLKMGGYGLFRFSAYFMGNLSVVGC---LWTVVGLTGGVFLSLVCLRQSDVKSLIAYSSV 283 Query: 321 SHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSK 380 HMG V+ + T S L G+ + M +HGL ++GLF L Y +IH+R + + GL + Sbjct: 284 VHMGLVVGGLVTMSWLGVVGSYVLMFSHGLCSSGLFCLANMNYMQIHSRSLILNSGLINL 343 Query: 381 MKWLPALSLFFAVATLGMPGTGNFVGE 407 + + A + + P + N +GE Sbjct: 344 IPSGALIWFLLASSNMAAPPSLNLLGE 370 >UniRef50_Q6UKF6 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Phoronis psammophila RepID=Q6UKF6_9BILA Length = 453 Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 108/395 (27%), Positives = 196/395 (49%), Gaps = 25/395 (6%) Query: 84 DGLSLLMVVLTGLLGVLAVLCSWK---EIEKYQGFFHLNLMWILGGVIGVFLAI---DMF 137 D +S+ +++L+ + +L +L SW + K + F+ +W + ++ + L+ + Sbjct: 57 DSMSMALIILSSWIFILMMLASWSILLKSNKKKEFY----LWAISLILVLILSFSFNNAL 112 Query: 138 LFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHY 197 F+F +E LVP+ +I WG++ R+ A+ +YT + L +LA++ Y Sbjct: 113 FFYFSFEASLVPIMMMILGWGYQPE----RLQASFYLILYTVGASL----PLLAMLLKIY 164 Query: 198 NATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSV 257 + F Y +++ S + + + +AF V MP+ H WLP AH +AP AGS+ Sbjct: 165 FSMKSLNFFYLATVSSFSFSSIGSFMWILIILAFLVSMPMFLFHLWLPKAHVEAPVAGSM 224 Query: 258 DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAY 317 LAG+LLK +YG LR + +FP + F L + G + + Q D+K LIAY Sbjct: 225 ILAGVLLKLGSYGFLRVA-SIFPMLNISFFSTVSSLSLWGAVITSLICLRQVDMKALIAY 283 Query: 318 TSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGL 377 +SV HMG +L +G+ L ++ +++ M+AHG+ ++GLF+L +YE+ R + + GL Sbjct: 284 SSVGHMGLLLAGSLSGNFLGWESSLLMMLAHGVCSSGLFMLVNLIYEKSQNRSLFLTKGL 343 Query: 378 WSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLV--FASVY 435 + WL ++ + P + N E +++ + V T GL+ A+ Y Sbjct: 344 LNLFPWLTLGWFLLSIINMAAPPSVNLASELLLVSSVISCCGLTLV--TLGLISFLAAAY 401 Query: 436 SLAMLHRAYFGKAKSQIASQELPGMSLRELFMILL 470 SL + GK + + + + RE I++ Sbjct: 402 SLFIFTATSHGKISAYLTMES--SLKAREYLNIMM 434 >UniRef50_Q9G2W9 NADH-ubiquinone oxidoreductase chain 4 n=193 Tax=Craniata RepID=NU4M_MYXGL Length = 458 Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 132/417 (31%), Positives = 198/417 (47%), Gaps = 36/417 (8%) Query: 84 DGLSLLMVVLTGLLGVLAVLCSWKEIEK----YQGFFHLNLMWILGGVIGVFLAIDMFLF 139 D +S +V L+ + L L S ++K YQ + L+ + +I FL+ ++ F Sbjct: 62 DMISAPLVFLSLWMLPLMALASQHHMKKSPLSYQLLYITILIIMQTLLILTFLSTNLMNF 121 Query: 140 FFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNA 199 + +E L+P+ +I WG++ K RI A YT LI L L+ Sbjct: 122 YILFESSLIPILLIIFRWGNQ----KERINAGIYLSFYT-------LIGSLPLLASLLFL 170 Query: 200 TGVWTFNYEELLNTPMSSGVEY---LLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGS 256 + + Y +L M S Y +L LG F A +K P+ H WLP AH +A AGS Sbjct: 171 SNTLSTLYIPILM--MESSEMYHSPILWLGCFSALLIKTPLYGFHLWLPKAHVEATIAGS 228 Query: 257 VDLAGILLKTAAYGLLRFSLPLF---PNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKR 313 + LA ++LK YG++R SL F P S IA+W G +++ QTD+K Sbjct: 229 MTLAALMLKLGGYGMIRLSLMPFLHSPKLSLILISIALW----GAVMTSFICLRQTDLKA 284 Query: 314 LIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRM 373 LIAY+SVSHMG + +I T S GA I MIAHGLS++ LF L YE+ +TR + + Sbjct: 285 LIAYSSVSHMGLMTASIMTLSLWGMSGAFIMMIAHGLSSSALFFLANSNYEKTNTRTIIL 344 Query: 374 MGGLWSKMKWLPALS---LFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLV 430 L LP S LF + L MP + NF+ E I+ F P+ +V Sbjct: 345 ---LRHTQMLLPLTSLWWLFIILTNLAMPPSINFISEITIMSSLFLWSPLTFPFLALTMV 401 Query: 431 FASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILD 487 + YS++M A + K ++ L S RE + L + ++ + YP I++ Sbjct: 402 ITTTYSMSMFMLA---QGKLSKMTKILSPFSTREHLTLFLHLFPMIAIMAYPNMIIN 455 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0AFE9 NADH-quinone oxidoreductase subunit M n=205 Tax=... 563 e-159 UniRef50_A4XV13 Proton-translocating NADH-quinone oxidoreductase... 480 e-134 UniRef50_Q9I0J0 NADH-quinone oxidoreductase subunit M n=15 Tax=B... 478 e-133 UniRef50_D2U4G9 NADH-quinone oxidoreductase chain M n=1 Tax=Arse... 449 e-124 UniRef50_D0LZ06 Proton-translocating NADH-quinone oxidoreductase... 436 e-121 UniRef50_A9F578 NADH dehydrogenase I chain M n=1 Tax=Sorangium c... 436 e-120 UniRef50_D1C6X8 Proton-translocating NADH-quinone oxidoreductase... 435 e-120 UniRef50_Q1IS53 Proton-translocating NADH-quinone oxidoreductase... 431 e-119 UniRef50_B1KJV9 Proton-translocating NADH-quinone oxidoreductase... 418 e-115 UniRef50_B9L177 Nadh-quinone oxidoreductase chain m n=1 Tax=Ther... 418 e-115 UniRef50_P57263 NADH-quinone oxidoreductase subunit M n=4 Tax=Bu... 417 e-115 UniRef50_A3ZKZ8 Proton-translocating NADH-quinone oxidoreductase... 413 e-114 UniRef50_Q2IN04 Proton-translocating NADH-quinone oxidoreductase... 410 e-113 UniRef50_B1ZA34 Proton-translocating NADH-quinone oxidoreductase... 409 e-113 UniRef50_D2R5F8 Proton-translocating NADH-quinone oxidoreductase... 408 e-112 UniRef50_Q1NQL7 Proton-translocating NADH-quinone oxidoreductase... 405 e-111 UniRef50_Q6MGN7 NADH dehydrogenase I chain M n=3 Tax=Bacteria Re... 404 e-111 UniRef50_P93313 NADH-ubiquinone oxidoreductase chain 4 n=140 Tax... 403 e-111 UniRef50_B0BZT1 Proton-translocating NAD(P)H-quinone oxidoreduct... 403 e-110 UniRef50_B5YKJ1 NADH-quinone oxidoreductase chain m n=15 Tax=cel... 402 e-110 UniRef50_Q7VRW3 NADH dehydrogenase I chain M n=2 Tax=Gammaproteo... 401 e-110 UniRef50_B0SFU4 NADH dehydrogenase (Ubiquinone), M chain n=6 Tax... 399 e-109 UniRef50_Q3BRP1 NADH-ubiquinone oxidoreductase NQO13 subunit n=1... 399 e-109 UniRef50_Q02CT2 Proton-translocating NADH-quinone oxidoreductase... 397 e-109 UniRef50_A9B6Y1 Proton-translocating NADH-quinone oxidoreductase... 397 e-109 UniRef50_Q2S2L1 NADH dehydrogenase i, m subunit n=7 Tax=Bacteria... 397 e-109 UniRef50_C4XGW9 NADH-quinone oxidoreductase chain M n=3 Tax=Desu... 395 e-108 UniRef50_D2L5S8 Proton-translocating NADH-quinone oxidoreductase... 395 e-108 UniRef50_C6BS86 Proton-translocating NADH-quinone oxidoreductase... 393 e-108 UniRef50_A6FCN8 NuoM2 NADH-Ubiquinone/plastoquinone (Complex I) ... 390 e-107 UniRef50_B8DS13 Proton-translocating NADH-quinone oxidoreductase... 389 e-106 UniRef50_Q1DDD2 NADH dehydrogenase I, M subunit n=2 Tax=Cystobac... 388 e-106 UniRef50_B3QY39 Proton-translocating NADH-quinone oxidoreductase... 386 e-106 UniRef50_D0L251 Proton-translocating NADH-quinone oxidoreductase... 384 e-105 UniRef50_Q39ZA6 Proton-translocating NADH-quinone oxidoreductase... 382 e-104 UniRef50_A0B819 F420H2 dehydrogenase subunit M n=2 Tax=Methanosa... 381 e-104 UniRef50_Q37617 NADH-ubiquinone oxidoreductase chain 4 n=80 Tax=... 380 e-104 UniRef50_C1ZFV0 NADH dehydrogenase subunit M n=1 Tax=Planctomyce... 380 e-104 UniRef50_A1KRT7 NADH dehydrogenase chain M n=30 Tax=Proteobacter... 379 e-103 UniRef50_C1AB27 NADH-quinone oxidoreductase chain M n=1 Tax=Gemm... 379 e-103 UniRef50_D2SHE2 Proton-translocating NADH-quinone oxidoreductase... 375 e-102 UniRef50_C3XEB0 NADH-quinone oxidoreductase subunit M n=1 Tax=He... 375 e-102 UniRef50_A9EX60 NADH dehydrogenase (Ubiquinone) n=1 Tax=Sorangiu... 374 e-102 UniRef50_C3XM21 NADH-ubiquinone oxidoreductase n=4 Tax=Campyloba... 374 e-102 UniRef50_Q0RRV6 NADH-quinone oxidoreductase chain M (NADH dehydr... 373 e-102 UniRef50_D1CCC3 Proton-translocating NADH-quinone oxidoreductase... 372 e-101 UniRef50_Q30PJ1 Proton-translocating NADH-quinone oxidoreductase... 371 e-101 UniRef50_Q7V4E4 NAD(P)H-quinone oxidoreductase chain 4 n=43 Tax=... 369 e-100 UniRef50_Q1RKE5 NADH-quinone oxidoreductase subunit M n=17 Tax=R... 369 e-100 UniRef50_C1DT37 NADH-quinone oxidoreductase subunit m (Nadhdehyd... 368 e-100 UniRef50_O53307 NADH-quinone oxidoreductase subunit M n=26 Tax=A... 367 e-100 UniRef50_Q7NHJ9 NADH dehydrogenase subunit 4 n=1 Tax=Gloeobacter... 367 e-100 UniRef50_A7NEJ8 NADH-quinone oxidoreductase, subunit M n=19 Tax=... 365 2e-99 UniRef50_C8XBD3 Proton-translocating NADH-quinone oxidoreductase... 364 4e-99 UniRef50_D1AZ50 Proton-translocating NADH-quinone oxidoreductase... 363 1e-98 UniRef50_A7H9U2 Proton-translocating NADH-quinone oxidoreductase... 361 3e-98 UniRef50_Q3MAR0 NAD(P)H-quinone oxidoreductase chain 4 2 n=84 Ta... 361 4e-98 UniRef50_Q89AT5 NADH-quinone oxidoreductase subunit M n=2 Tax=ce... 359 1e-97 UniRef50_A5UVF7 Proton-translocating NADH-quinone oxidoreductase... 359 1e-97 UniRef50_B2TCE8 Proton-translocating NADH-quinone oxidoreductase... 359 1e-97 UniRef50_UPI00016C46D6 proton-translocating NADH-quinone oxidore... 358 3e-97 UniRef50_C4XMN2 NADH-quinone oxidoreductase chain M n=1 Tax=Desu... 358 3e-97 UniRef50_A1T694 Proton-translocating NADH-quinone oxidoreductase... 357 5e-97 UniRef50_C5AJH4 Proton-translocating NADH-quinone oxidoreductase... 357 7e-97 UniRef50_Q9MD18 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=S... 355 2e-96 UniRef50_O47497 NADH-ubiquinone oxidoreductase chain 4 n=50 Tax=... 355 3e-96 UniRef50_C1ZAS9 NADH dehydrogenase subunit M n=1 Tax=Planctomyce... 354 6e-96 UniRef50_D2QSX5 Proton-translocating NADH-quinone oxidoreductase... 352 1e-95 UniRef50_C1F9D1 NADH dehydrogenase I, M subunit n=1 Tax=Acidobac... 352 2e-95 UniRef50_A4FPS9 NADH dehydrogenase I chain M n=1 Tax=Saccharopol... 351 4e-95 UniRef50_Q67KP5 NADH dehydrogenase I subunit M n=1 Tax=Symbiobac... 350 5e-95 UniRef50_UPI00019790B7 NADH dehydrogenase subunit M n=1 Tax=Heli... 350 6e-95 UniRef50_D2L238 Proton-translocating NADH-quinone oxidoreductase... 350 6e-95 UniRef50_Q0H8X6 NADH-ubiquinone oxidoreductase chain 4 n=10 Tax=... 349 2e-94 UniRef50_C0ZYI8 NADH-quinone oxidoreductase chain M n=22 Tax=Act... 347 6e-94 UniRef50_D2RZ76 Proton-translocating NADH-quinone oxidoreductase... 347 6e-94 UniRef50_Q3Z7Z2 Proton-translocating NADH-quinone oxidoreductase... 347 8e-94 UniRef50_D2M1W1 Proton-translocating NADH-quinone oxidoreductase... 346 1e-93 UniRef50_B7K6C0 Proton-translocating NADH-quinone oxidoreductase... 345 2e-93 UniRef50_Q37401 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=A... 344 5e-93 UniRef50_Q0BU96 NADH-quinone oxidoreductase chain M n=12 Tax=Ace... 341 4e-92 UniRef50_C7PRG9 Proton-translocating NADH-quinone oxidoreductase... 340 8e-92 UniRef50_B7GME2 NADH dehydrogenase subunit M n=6 Tax=Bacillaceae... 339 1e-91 UniRef50_D1BBE0 NADH dehydrogenase subunit M n=1 Tax=Sanguibacte... 338 3e-91 UniRef50_B8FRJ8 Proton-translocating NADH-quinone oxidoreductase... 338 3e-91 UniRef50_Q466B7 F420H2 dehydrogenase subunit M n=3 Tax=Methanosa... 337 5e-91 UniRef50_Q1ZRW3 NADH dehydrogenase I, M subunit n=2 Tax=Photobac... 337 6e-91 UniRef50_Q3JBP3 Proton-translocating NADH-quinone oxidoreductase... 337 6e-91 UniRef50_Q46LV6 Proton-translocating NADH-quinone oxidoreductase... 337 9e-91 UniRef50_B5IL09 NAD(P)H dehydrogenase I, subunit D-2 n=3 Tax=Cya... 336 1e-90 UniRef50_A5UXL0 Proton-translocating NADH-quinone oxidoreductase... 336 2e-90 UniRef50_C0VVK4 NADH dehydrogenase subunit M n=2 Tax=Corynebacte... 335 2e-90 UniRef50_A1SE39 Proton-translocating NADH-quinone oxidoreductase... 333 7e-90 UniRef50_B0CBT4 Proton-translocating NAD(P)H-quinone oxidoreduct... 333 1e-89 UniRef50_D2SDG3 Proton-translocating NADH-quinone oxidoreductase... 332 2e-89 UniRef50_Q9G8V8 NADH-ubiquinone oxidoreductase chain 4 n=8 Tax=E... 332 2e-89 UniRef50_A4WT79 Proton-translocating NADH-quinone oxidoreductase... 332 3e-89 UniRef50_C1A8Y2 NADH-quinone oxidoreductase chain M n=1 Tax=Gemm... 331 3e-89 UniRef50_B9XFX2 Proton-translocating NADH-quinone oxidoreductase... 330 8e-89 UniRef50_C6D5D3 Proton-translocating NADH-quinone oxidoreductase... 329 1e-88 UniRef50_Q6UVR8 NADH-ubiquinone oxidoreductase chain 4 n=5 Tax=V... 329 1e-88 UniRef50_Q11VC4 NADH dehydrogenase I chain M n=1 Tax=Cytophaga h... 329 2e-88 UniRef50_Q3JBP7 Proton-translocating NADH-quinone oxidoreductase... 328 2e-88 UniRef50_Q5FHA2 NADH-quinone oxidoreductase chain M n=11 Tax=Ric... 328 2e-88 UniRef50_Q3A816 NADH dehydrogenase I chain M n=1 Tax=Pelobacter ... 328 2e-88 UniRef50_C2KMP1 NADH dehydrogenase (Quinone) n=4 Tax=Actinomycet... 328 3e-88 UniRef50_C6X103 NADH-ubiquinone oxidoreductase chain M n=2 Tax=F... 327 5e-88 UniRef50_C5C0R5 Proton-translocating NADH-quinone oxidoreductase... 327 5e-88 UniRef50_Q11RU7 NADH:ubiquinone oxidoreductase chain M n=4 Tax=F... 326 1e-87 UniRef50_B9W1R4 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=G... 326 2e-87 UniRef50_A8ERK4 NADH-quinone oxidoreductase, M subunit n=1 Tax=A... 325 2e-87 UniRef50_B9XHI7 Proton-translocating NADH-quinone oxidoreductase... 325 2e-87 UniRef50_A6L163 NADH dehydrogenase I chain M n=18 Tax=Bacteroide... 324 5e-87 UniRef50_UPI0001C3127E proton-translocating NADH-quinone oxidore... 324 6e-87 UniRef50_C7M2U9 Proton-translocating NADH-quinone oxidoreductase... 323 7e-87 UniRef50_UPI0001C3347B NADH dehydrogenase subunit M n=6 Tax=Cyan... 323 1e-86 UniRef50_D1BW17 Proton-translocating NADH-quinone oxidoreductase... 323 1e-86 UniRef50_B8G566 Proton-translocating NADH-quinone oxidoreductase... 323 1e-86 UniRef50_A0LEQ7 Proton-translocating NADH-quinone oxidoreductase... 322 2e-86 UniRef50_A5FKK8 NADH dehydrogenase subunit M n=2 Tax=Flavobacter... 322 3e-86 UniRef50_Q2GKR0 NADH dehydrogenase I, M subunit n=5 Tax=Anaplasm... 321 5e-86 UniRef50_D1PWI6 Proton-translocating NADH-quinone oxidoreductase... 321 5e-86 UniRef50_A7UQZ1 AGAP012727-PA (Fragment) n=1 Tax=Anopheles gambi... 319 2e-85 UniRef50_A7NL13 Proton-translocating NADH-quinone oxidoreductase... 318 3e-85 UniRef50_Q9ZJV5 NADH oxidoreductase I n=12 Tax=Helicobacter RepI... 318 4e-85 UniRef50_P26288 NAD(P)H-quinone oxidoreductase chain 4, chloropl... 316 1e-84 UniRef50_UPI0001C30612 NADH dehydrogenase subunit 4 n=1 Tax=Phae... 315 2e-84 UniRef50_C9MQ80 NADH dehydrogenase, M subunit n=18 Tax=Bacteroid... 315 3e-84 UniRef50_C0Z764 NADH-quinone oxidoreductase chain M n=2 Tax=Baci... 314 6e-84 UniRef50_Q1AVJ1 Proton-translocating NADH-quinone oxidoreductase... 314 6e-84 UniRef50_Q1H3T5 NADH dehydrogenase (Quinone) n=12 Tax=Proteobact... 313 7e-84 UniRef50_Q1AZS5 Proton-translocating NADH-quinone oxidoreductase... 313 8e-84 UniRef50_B9XFX1 Proton-translocating NADH-quinone oxidoreductase... 312 2e-83 UniRef50_Q6MDQ4 Putative NADH-ubiquinone oxidoreductase chain M ... 311 3e-83 UniRef50_D2PVJ1 Proton-translocating NADH-quinone oxidoreductase... 311 4e-83 UniRef50_C7P4L7 Proton-translocating NADH-quinone oxidoreductase... 310 1e-82 UniRef50_C9RKX5 Proton-translocating NADH-quinone oxidoreductase... 309 1e-82 UniRef50_UPI00003837CC COG1009: NADH:ubiquinone oxidoreductase s... 309 1e-82 UniRef50_C9RWL8 Proton-translocating NADH-quinone oxidoreductase... 308 3e-82 UniRef50_C1F221 NADH dehydrogenase I, M subunit n=1 Tax=Acidobac... 308 3e-82 UniRef50_Q37375 NADH-ubiquinone oxidoreductase chain 4 n=2 Tax=E... 308 3e-82 UniRef50_Q0FXW0 NADH dehydrogenase subunit 4 n=3 Tax=Alphaproteo... 306 1e-81 UniRef50_B0R3V0 NADH dehydrogenase-like complex subunit M n=9 Ta... 306 1e-81 UniRef50_Q950R4 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=S... 306 2e-81 UniRef50_B4U8I0 Proton-translocating NADH-quinone oxidoreductase... 305 3e-81 UniRef50_Q5EM42 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=M... 303 1e-80 UniRef50_O21047 NADH-ubiquinone oxidoreductase chain 4 n=3 Tax=D... 301 3e-80 UniRef50_D1A432 Proton-translocating NADH-quinone oxidoreductase... 301 6e-80 UniRef50_C1F222 NADH dehydrogenase I, M subunit n=1 Tax=Acidobac... 300 6e-80 UniRef50_B7HY49 NADH dehydrogenase (Ubiquinone), M subunit n=71 ... 300 7e-80 UniRef50_Q85JB2 NADH-ubiquinone oxidoreductase chain 4 n=4 Tax=M... 300 1e-79 UniRef50_C6V5H6 NADH-quinone oxidoreductase chain m n=2 Tax=Neor... 299 1e-79 UniRef50_B2XX63 NADH-ubiquinone oxidoreductase chain 4 n=3 Tax=D... 299 2e-79 UniRef50_A0AL63 Complete genome n=20 Tax=Bacillales RepID=A0AL63... 298 4e-79 UniRef50_A9B486 Proton-translocating NADH-quinone oxidoreductase... 297 6e-79 UniRef50_Q52978 Probable K(+)/H(+) antiporter subunit A/B n=110 ... 297 6e-79 UniRef50_B2A694 NADH dehydrogenase (Quinone) n=1 Tax=Natranaerob... 297 1e-78 UniRef50_B1ZBB1 Proton-translocating NADH-quinone oxidoreductase... 296 1e-78 UniRef50_C7RLG1 Proton-translocating NADH-quinone oxidoreductase... 296 2e-78 UniRef50_A9YMC4 NADH-ubiquinone oxidoreductase chain 4 n=17 Tax=... 295 3e-78 UniRef50_A1API0 Proton-translocating NADH-quinone oxidoreductase... 293 1e-77 UniRef50_A6Q8K1 NADH-quinone oxidoreductase, chain M n=3 Tax=Eps... 292 2e-77 UniRef50_A0RME0 NADH-quinone oxidoreductase chain m n=1 Tax=Camp... 291 5e-77 UniRef50_C9RJZ1 Proton-translocating NADH-quinone oxidoreductase... 290 7e-77 UniRef50_C2BM70 CPA3 family monovalent cation:proton (H+) antipo... 290 8e-77 UniRef50_B1ZRS1 Proton-translocating NADH-quinone oxidoreductase... 290 1e-76 UniRef50_A8LTG8 NADH dehydrogenase (Quinone) n=58 Tax=Proteobact... 289 2e-76 UniRef50_Q12ZH4 Na+/H+ antiporter subunit n=2 Tax=Methanosarcina... 289 2e-76 UniRef50_A3THE8 Putative NADH dehydrogenase I chain M n=1 Tax=Ja... 287 7e-76 UniRef50_A6TVL4 NADH dehydrogenase (Quinone) n=2 Tax=Alkaliphilu... 286 1e-75 UniRef50_Q609T5 Hydrogenase subunit n=1 Tax=Methylococcus capsul... 286 1e-75 UniRef50_C7FEW5 NADH-ubiquinone oxidoreductase chain 4 n=2 Tax=S... 286 2e-75 UniRef50_Q9RGZ5 Na(+)/H(+) antiporter subunit A n=9 Tax=Firmicut... 286 2e-75 UniRef50_C7NIQ7 NADH:ubiquinone oxidoreductase subunit 5 (Chain ... 285 3e-75 UniRef50_Q49W91 Na(+)/H(+) antiporter subunit A1 n=19 Tax=Bacill... 285 3e-75 UniRef50_Q9G8P5 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=N... 285 4e-75 UniRef50_B2A3T0 NADH dehydrogenase (Quinone) n=2 Tax=Clostridia ... 284 5e-75 UniRef50_Q47IK6 Proton-translocating NADH-quinone oxidoreductase... 284 6e-75 UniRef50_Q9TAK8 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=C... 284 7e-75 UniRef50_C0WGQ4 CPA3 family monovalent cation:proton (H+) antipo... 283 7e-75 UniRef50_A9A3Z6 Proton-translocating NADH-quinone oxidoreductase... 283 8e-75 UniRef50_C5A2R1 Formate hydrogenlyase II subunit D (Mhy2D) n=1 T... 283 9e-75 UniRef50_Q3T4B9 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=S... 281 5e-74 UniRef50_Q12ZH7 Na+/H+ antiporter subunit n=2 Tax=Methanosarcina... 280 6e-74 UniRef50_B6YTY8 Membrane bound hydrogenase, MbhH subunit n=9 Tax... 280 7e-74 UniRef50_A3YZD4 NADH dehydrogenase subunit 4 n=1 Tax=Synechococc... 278 3e-73 UniRef50_C0GDB1 NADH dehydrogenase (Quinone) n=2 Tax=Dethiobacte... 278 4e-73 UniRef50_B9KDW0 NADH-quinone oxidoreductase, M subunit n=1 Tax=C... 278 5e-73 UniRef50_D0XMF8 NADH dehydrogenase (Quinone) n=3 Tax=Alphaproteo... 277 9e-73 UniRef50_C5QQQ5 CPA3 family monovalent cation:proton (H+) antipo... 276 1e-72 UniRef50_Q67NV3 Na+/H+ antiporter subunit n=1 Tax=Symbiobacteriu... 276 1e-72 UniRef50_A6TVL5 NADH dehydrogenase (Quinone) n=1 Tax=Alkaliphilu... 276 1e-72 UniRef50_A0EYN0 NADH-ubiquinone oxidoreductase chain 4 n=2 Tax=X... 276 1e-72 UniRef50_B3DZT1 NADH dehydrogenase subunit M n=1 Tax=Methylacidi... 275 3e-72 UniRef50_D2QWL0 Proton-translocating NADH-quinone oxidoreductase... 275 4e-72 UniRef50_B4SLF9 NADH dehydrogenase (Quinone) n=20 Tax=cellular o... 275 4e-72 UniRef50_Q5N0H9 NADH dehydrogenase subunit 4 n=7 Tax=Cyanobacter... 273 1e-71 UniRef50_B3EIA1 Proton-translocating NADH-quinone oxidoreductase... 273 1e-71 UniRef50_C8NJU8 NADH ubiquinone oxidoreductase subunit 5 (Chain ... 273 2e-71 UniRef50_C7NST6 NADH dehydrogenase (Quinone) n=4 Tax=Halobacteri... 272 2e-71 UniRef50_D2B4L0 NADH dehydrogenase (Quinone) n=17 Tax=Actinomyce... 272 2e-71 UniRef50_B2A693 Proton-translocating NADH-quinone oxidoreductase... 271 4e-71 UniRef50_A6YHK2 NADH-ubiquinone oxidoreductase chain 4 n=3 Tax=H... 270 7e-71 UniRef50_P55781 NADH-ubiquinone oxidoreductase chain 4 n=1187 Ta... 270 8e-71 UniRef50_C0XU58 CPA3 family monovalent cation (K+ or Na+):proton... 270 1e-70 UniRef50_B3QY40 Proton-translocating NADH-quinone oxidoreductase... 270 1e-70 UniRef50_C5CEV1 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Ta... 269 2e-70 UniRef50_Q2FZV1 Na(+)/H(+) antiporter subunit A1 n=72 Tax=Bacill... 269 2e-70 UniRef50_A4X1Y9 Proton-translocating NADH-quinone oxidoreductase... 269 2e-70 UniRef50_B5YL24 NADH-quinone oxidoreductase chain m, putative n=... 268 3e-70 UniRef50_Q1IZW1 NADH-quinone oxidoreductase, M subunit n=3 Tax=D... 268 3e-70 UniRef50_B6YTX9 Hydrogenase 4, component F or formate hydrogen l... 268 5e-70 UniRef50_A7JYE5 Na(+) H(+) antiporter subunit D n=3 Tax=Vibrio R... 267 7e-70 UniRef50_C1TKY1 Formate hydrogenlyase subunit 3/multisubunit Na+... 267 8e-70 UniRef50_Q8R9B0 Formate hydrogenlyase subunit 3/Multisubunit Na+... 266 1e-69 UniRef50_Q950M6 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=R... 266 1e-69 UniRef50_P12775 NADH-ubiquinone oxidoreductase chain 4 n=29 Tax=... 266 1e-69 UniRef50_Q9UYP1 Hydrogenase 4, component F or formate hydrogen l... 265 3e-69 UniRef50_A7XPD6 NADH-ubiquinone oxidoreductase chain 4 n=58 Tax=... 265 3e-69 UniRef50_C8W236 Hydrogenase, membrane subunit n=1 Tax=Desulfotom... 265 3e-69 UniRef50_B8KBU6 pH adaption potassium efflux system protein n=6 ... 265 4e-69 UniRef50_Q9RVZ0 NADH-ubiquinone/plastoquinone subunit, putative ... 265 4e-69 UniRef50_Q47T29 NADH dehydrogenase (Quinone) n=4 Tax=Actinomycet... 264 5e-69 UniRef50_C5NVG1 Na(+)/H(+) antiporter subunit A n=1 Tax=Gemella ... 264 6e-69 UniRef50_B1ZSE3 NADH dehydrogenase (Quinone) n=1 Tax=Opitutus te... 264 6e-69 UniRef50_B4CV23 Proton-translocating NADH-quinone oxidoreductase... 264 6e-69 UniRef50_B9LT20 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Ta... 264 7e-69 UniRef50_B6YWP6 Hydrogenase 4, subunit 3 n=3 Tax=Thermococcus Re... 264 7e-69 UniRef50_B0VE74 pH adaptation potassium efflux system transmembr... 263 9e-69 UniRef50_C6A3Z7 Membrane-bound hydrogenase MBH 2, subunit Mbh2H ... 263 1e-68 UniRef50_C8XH11 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Ta... 263 2e-68 UniRef50_B1ZSD9 NADH dehydrogenase (Quinone) n=2 Tax=Bacteria Re... 261 3e-68 UniRef50_B6YWQ6 Hydrogenase 4, subunit 3 n=2 Tax=Thermococcus Re... 261 4e-68 UniRef50_P03905 NADH-ubiquinone oxidoreductase chain 4 n=7832 Ta... 261 4e-68 UniRef50_Q34949 NADH-ubiquinone oxidoreductase chain 4 n=5 Tax=L... 261 5e-68 UniRef50_A7H5R9 NADH-quinone oxidoreductase, M subunit n=15 Tax=... 260 7e-68 UniRef50_C1YJ06 NADH:ubiquinone oxidoreductase subunit 5 (Chain ... 260 7e-68 UniRef50_Q3AB32 Carbon monoxide-induced hydrogenase, membrane an... 260 8e-68 UniRef50_B8DNI8 NADH dehydrogenase (Quinone) n=4 Tax=Desulfovibr... 260 1e-67 UniRef50_C0QBF3 HyfB n=1 Tax=Desulfobacterium autotrophicum HRM2... 260 1e-67 UniRef50_C7RLG5 Proton-translocating NADH-quinone oxidoreductase... 260 1e-67 UniRef50_C7Q1G6 NADH dehydrogenase (Quinone) n=2 Tax=Actinomycet... 259 1e-67 Sequences not found previously or not previously below threshold: UniRef50_B9DJY9 Putative NADH dehydrogenase I chain L n=1 Tax=St... 279 2e-73 UniRef50_UPI00005100B6 putative monovalent cation/H+ antiporter ... 273 1e-71 UniRef50_C0A9K9 NADH dehydrogenase (Quinone) n=1 Tax=Opitutaceae... 272 2e-71 UniRef50_C4LLM4 Na(+)/H(+) antiporter subunit n=3 Tax=Corynebact... 265 3e-69 UniRef50_B9XHI6 Proton-translocating NADH-quinone oxidoreductase... 265 3e-69 UniRef50_Q6GBK7 Putative antiporter subunit mnhA2 n=63 Tax=Staph... 264 7e-69 UniRef50_D2S7T6 NADH dehydrogenase (Quinone) n=1 Tax=Geodermatop... 261 4e-68 UniRef50_B1VI36 pH adaptation potassium efflux system transmembr... 261 5e-68 >UniRef50_P0AFE9 NADH-quinone oxidoreductase subunit M n=205 Tax=Gammaproteobacteria RepID=NUOM_ECO57 Length = 509 Score = 563 bits (1452), Expect = e-159, Method: Composition-based stats. Identities = 509/509 (100%), Positives = 509/509 (100%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI Sbjct: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL Sbjct: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA Sbjct: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL Sbjct: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY Sbjct: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG Sbjct: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV Sbjct: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF Sbjct: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 Query: 481 YPQPILDTSHSAIGNIQQWFVNSVTTTRP 509 YPQPILDTSHSAIGNIQQWFVNSVTTTRP Sbjct: 481 YPQPILDTSHSAIGNIQQWFVNSVTTTRP 509 >UniRef50_A4XV13 Proton-translocating NADH-quinone oxidoreductase, chain M n=10 Tax=Proteobacteria RepID=A4XV13_PSEMY Length = 509 Score = 480 bits (1237), Expect = e-134, Method: Composition-based stats. Identities = 368/508 (72%), Positives = 427/508 (84%), Gaps = 4/508 (0%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSA-G 59 M+LPWLILIPFIGG LCWQ ERFG +PRW+ALITMGL L L L LW G ++L + G Sbjct: 1 MILPWLILIPFIGGLLCWQGERFGHVLPRWLALITMGLLLGLGLWLWASGDFTLAPAPDG 60 Query: 60 IPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLN 119 P+W EF + WIPR GI+IHLA+DGLS+LMVVLTGLLGVL+VLCSW EI+ GFFHLN Sbjct: 61 GPRWAHEFVIDWIPRLGITIHLAMDGLSVLMVVLTGLLGVLSVLCSWNEIQHRVGFFHLN 120 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 LMWILGGV+GVFLA+D+FLFFFFWEMMLVPMYFLIALWGH SDG+TRITAATKFFI+TQ Sbjct: 121 LMWILGGVVGVFLAVDLFLFFFFWEMMLVPMYFLIALWGHSGSDGRTRITAATKFFIFTQ 180 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 ASGL+ML+AILALV VH+N TGV TFNY +LL T ++ G EYLLMLGFFIAFAVK PVVP Sbjct: 181 ASGLIMLVAILALVLVHFNQTGVLTFNYADLLQTELAPGTEYLLMLGFFIAFAVKFPVVP 240 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 +H WLPDAH+QAPTAGSVDLAGILLKTAAYGLLRF+LPLFPNASAEFAPIA WLGV I Sbjct: 241 VHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAPIAQWLGVFAII 300 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 YGA ++FAQTDIKRL+AY+SVSHMGFVLIAIY+GSQ+A QGAV+QM+AHGLSAA LFILC Sbjct: 301 YGALLSFAQTDIKRLVAYSSVSHMGFVLIAIYSGSQIALQGAVVQMVAHGLSAAALFILC 360 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP 419 GQLYER+HTRD+R MGG+W++M WLPA+SLFFA A LG+PGTGNFVGEF+IL GSF P Sbjct: 361 GQLYERLHTRDLRQMGGIWARMPWLPAISLFFAAAALGLPGTGNFVGEFLILIGSFPGAP 420 Query: 420 VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLG 479 + VI+ GLV SVY+LAM+HRAYFG + LPG+ REL M+L L VLL+LLG Sbjct: 421 WVVVIAATGLVLGSVYALAMIHRAYFGPVQQDAP---LPGLKPRELSMVLGLAVLLILLG 477 Query: 480 FYPQPILDTSHSAIGNIQQWFVNSVTTT 507 YPQP+LDTS +++ +QQW +++ Sbjct: 478 VYPQPVLDTSAASMHGVQQWMADALNQL 505 >UniRef50_Q9I0J0 NADH-quinone oxidoreductase subunit M n=15 Tax=Bacteria RepID=NUOM_PSEAE Length = 509 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 371/509 (72%), Positives = 434/509 (85%), Gaps = 5/509 (0%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQS-AG 59 M+LPWLILIPFIGGFLCW E +PRWIAL++M L L LSL +W G + L + G Sbjct: 1 MILPWLILIPFIGGFLCWIAEHSSKTLPRWIALLSMTLVLILSLWIWATGDFQLAPAPGG 60 Query: 60 IPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLN 119 P+W +F + WI R GISIHLA+DGLSLLMV LTGLLGVL+VLCSW EI++ GFFHLN Sbjct: 61 EPEWTLQFKVLWIERLGISIHLAMDGLSLLMVALTGLLGVLSVLCSWNEIQRRIGFFHLN 120 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGK-TRITAATKFFIYT 178 L+WILGGVIGVFLAID+FLFFFFWEMMLVPMYFLIALWGH + DGK TRI AATKFFI+T Sbjct: 121 LLWILGGVIGVFLAIDLFLFFFFWEMMLVPMYFLIALWGHSSDDGKKTRIYAATKFFIFT 180 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 QASGLVML+AIL LVFV++NATGV TF+Y LL T +S VE+LLMLGFF+AFAVKMPVV Sbjct: 181 QASGLVMLVAILGLVFVNFNATGVITFDYATLLKTQLSPHVEWLLMLGFFVAFAVKMPVV 240 Query: 239 PLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 P+H WLPDAH+QAPTAGSVDLAGILLKTAAYGL+RF+LPLFPNASAEFAPIAMWLG+IGI Sbjct: 241 PVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFALPLFPNASAEFAPIAMWLGIIGI 300 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFIL 358 FYGA ++FAQTDIKRL+AY+SVSHMGFV+I IY+GSQ+A QG V+QMIAHGLSAA LFIL Sbjct: 301 FYGALLSFAQTDIKRLVAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFIL 360 Query: 359 CGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVV 418 CGQLYER+HTRDMR MGGLWS+M +LPA+SLFFA A+LG+PGTGNFVGEF+IL G+F+VV Sbjct: 361 CGQLYERLHTRDMRKMGGLWSRMPYLPAISLFFASASLGLPGTGNFVGEFLILIGAFKVV 420 Query: 419 PVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLL 478 PVI VI+TFGLVFASVYSL M+HRAYFG ++S + + G+ REL M+L L VLLVLL Sbjct: 421 PVIIVIATFGLVFASVYSLIMIHRAYFGPSQSD---EPILGLDARELSMVLGLAVLLVLL 477 Query: 479 GFYPQPILDTSHSAIGNIQQWFVNSVTTT 507 G YPQP+LD S +++ +QQW +++T Sbjct: 478 GVYPQPVLDISAASMHGVQQWLGAALSTL 506 >UniRef50_D2U4G9 NADH-quinone oxidoreductase chain M n=1 Tax=Arsenophonus nasoniae RepID=D2U4G9_9ENTR Length = 506 Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats. Identities = 334/509 (65%), Positives = 414/509 (81%), Gaps = 3/509 (0%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 MLLPWLIL+PFIGG LCWQ+ RF + PR++AL+ MGLTL LS+ LWLQG YSLT + + Sbjct: 1 MLLPWLILLPFIGGVLCWQSGRFNQRAPRYLALLVMGLTLLLSVLLWLQGNYSLTNTLAL 60 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 PQWQ+ F MPWI GI+I LAIDGLSLLM+VLT ++G+ +VL SW E + QG +H +L Sbjct: 61 PQWQAIFFMPWITPLGINIALAIDGLSLLMIVLTAIMGIFSVLSSWSENQPNQGAYHFHL 120 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 MWIL GV+G+FLA+D+FLFFFFWEMML+PMYFLIA WGHK S+ + + AATKFFIYTQA Sbjct: 121 MWILAGVMGIFLAVDLFLFFFFWEMMLIPMYFLIANWGHKGSEERAHVNAATKFFIYTQA 180 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 SGL+ML+AI+AL +HY ++G W+F Y +LLNT MS+ +YLLMLGFFIAFAVKMP+VP Sbjct: 181 SGLIMLVAIVALALIHYQSSGNWSFAYHDLLNTKMSALTQYLLMLGFFIAFAVKMPLVPF 240 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 HGW+ D Q+PTAGSVD++GI+LKTAAYGLLRF+LPLFP AS +F PIAM LGVI IFY Sbjct: 241 HGWMADTQEQSPTAGSVDISGIMLKTAAYGLLRFTLPLFPTASIQFTPIAMTLGVISIFY 300 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 GAW+AF QTDIKRL+AY+S+SHMGFV +AIY GS LAYQGAV+QMIA+GLS A L I+ G Sbjct: 301 GAWLAFKQTDIKRLVAYSSLSHMGFVTVAIYAGSTLAYQGAVLQMIANGLSGAALIIISG 360 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 QLYER TRDMRMMGGLW ++ WLPALSLFFAVATLGMPGTGNFVGEFMILFG+F + Sbjct: 361 QLYERTGTRDMRMMGGLWKRIMWLPALSLFFAVATLGMPGTGNFVGEFMILFGTFGQFKL 420 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 +T I FG+VFAS+Y+L M+ + Y+G AKS+ + LP ++ RE+ ++L L +LLV+LGF Sbjct: 421 VTTIMVFGVVFASIYALWMMQQVYYGSAKSE---KALPALNGREILVLLTLALLLVILGF 477 Query: 481 YPQPILDTSHSAIGNIQQWFVNSVTTTRP 509 YPQP+LDTS + + ++ + S +T RP Sbjct: 478 YPQPVLDTSKNVMESLHSLYSISFSTLRP 506 >UniRef50_D0LZ06 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LZ06_HALO1 Length = 585 Score = 436 bits (1123), Expect = e-121, Method: Composition-based stats. Identities = 185/494 (37%), Positives = 279/494 (56%), Gaps = 19/494 (3%) Query: 13 GGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWI 72 G L R + R + L LT LSL ++ + Q+Q D+PWI Sbjct: 17 GALLIMLLPREEAGLCRAVGLGFSLLTFGLSLGIFGYF------ESANAQFQLVIDLPWI 70 Query: 73 PRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFL 132 G L IDG+SL +VVLT + +L S+ I K + F ++ + G++G F+ Sbjct: 71 DGLGAHFKLGIDGISLWLVVLTTFTMPIVLLSSYSSIHKREREFVALMLVLELGMLGAFV 130 Query: 133 AIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILAL 192 ++D+FLF+ FWE+ML+PMY LI +WG G RI A+ KF IYT L+ML AI + Sbjct: 131 SLDLFLFYIFWELMLIPMYLLIGIWG-----GNRRIYASIKFVIYTMVGSLLMLAAIFYV 185 Query: 193 VFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAP 252 VH G +T + E + +S + F +AFA+K+P+ PLH WLPDAH QAP Sbjct: 186 YVVHAEVAGFYTTDLEAVQRVLLSRDAQVWCFAAFALAFAIKVPLFPLHTWLPDAHVQAP 245 Query: 253 TAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIK 312 T GSV LAG+LLK YG LRF++P+FP ++ AP L V GI YGA +AFAQ D+K Sbjct: 246 TTGSVVLAGVLLKFGVYGFLRFAVPMFPYGTSVVAPYLAILAVAGIIYGALVAFAQDDVK 305 Query: 313 RLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMR 372 +L+AY+SVSH+GF ++ +++ + +G++ M++HGL+ GLF+ G LYER HTR M Sbjct: 306 KLVAYSSVSHLGFCILGLFSMTARGIEGSIFAMLSHGLTTGGLFLAIGVLYERRHTRRMA 365 Query: 373 MMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP-------VITVIS 425 GGLW++M + L + + G+PG F+GEF+ +FG+F ++ ++ Sbjct: 366 EYGGLWAQMPVFAGVFLICTLGSAGLPGLSGFIGEFLTIFGTFTTSAAYLPAPRLLGALA 425 Query: 426 TFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPI 485 G++ +VY L M + FG A++ L +S RE+ + LVV++ ++G PQP Sbjct: 426 ATGVILGAVYLLFMFQKLMFGPITRD-ANRGLRDLSGREMVVFAPLVVMIFVMGVAPQPF 484 Query: 486 LDTSHSAIGNIQQW 499 L T ++ ++ Sbjct: 485 LKTMEPSVERFIRF 498 >UniRef50_A9F578 NADH dehydrogenase I chain M n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F578_SORC5 Length = 754 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 184/514 (35%), Positives = 279/514 (54%), Gaps = 31/514 (6%) Query: 2 LLPWLILIPFIGGFLCWQ---TERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSA 58 +L L +P +G + + R + ++ MG+ L L+ L+ Q T++ Sbjct: 194 ILSILTFLPLLGVVAVFLAHLLRYRDDRKLRLMTVVLMGVNLVLAAWLYAQFDRGFTRAD 253 Query: 59 GIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHL 118 G +Q WI + + +DG+S+ MV+LT L+ + L S+ ++ +G+F + Sbjct: 254 GNDGYQFIEHGVWIRSLNVEYFVGVDGVSISMVLLTALISFVGALASYSVHDQLKGYFAM 313 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 + ++ G+ GVF+A+D+FLFF FWE+ML+PMYFLI +WG G R AA KFF+YT Sbjct: 314 YNL-LVTGMFGVFIALDLFLFFVFWEVMLLPMYFLIGIWG-----GPRREYAAIKFFLYT 367 Query: 179 QASGLVMLIAILALVFV---HYNATGVWT---FNYEELLN--------TPMSSGVEYLLM 224 A + ML+A + Y G T F+ EL T + ++ Sbjct: 368 LAGSVFMLLAFIWFYLNAGHTYLVDGQATERIFSIPELSRVAWAAQGLTILGVAAVKVVW 427 Query: 225 LGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASA 284 + F+ FA+K+P+ P H WLPDAH +APTA SV LAG+LLK YG+LR + L P A+ Sbjct: 428 IWLFVGFAIKIPMFPFHTWLPDAHVEAPTAISVILAGVLLKMGTYGILRINFTLLPEATQ 487 Query: 285 EFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQ 344 AP GV+ I YGA+ A AQ+D+K+L+AY+SVSHMGF L+A+ + Q ++Q Sbjct: 488 WAAPAMAVFGVVNILYGAFCAMAQSDLKKLVAYSSVSHMGFTLLALGAMTPQGIQACLVQ 547 Query: 345 MIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNF 404 M HGL LF L G +Y+R+HTRD+ GGL S+M AL F +A+LG+PG F Sbjct: 548 MFNHGLITGMLFTLVGVVYDRVHTRDIDRFGGLASEMPLYTALVGFAFMASLGLPGLSGF 607 Query: 405 VGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQ--------E 456 GE M G+F +T+++ G++ + Y L L R + G ++ + Sbjct: 608 WGEAMTFIGAFPRYRALTILAAVGVILTAAYHLWALQRMFLGTFRASWRQSKYLEPFGGK 667 Query: 457 LPGMSLRELFMILLLVVLLVLLGFYPQPILDTSH 490 P +S REL I L L+++LGF+P+P+L Sbjct: 668 FPEISGRELASIAPLAALVLVLGFWPRPLLSLID 701 >UniRef50_D1C6X8 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6X8_SPHTD Length = 527 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 188/528 (35%), Positives = 294/528 (55%), Gaps = 40/528 (7%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L L +P +G + + + + RW+AL ++LALSL + S + Sbjct: 6 ILSALTYVPLVGAAIIFFWPKASPQAARWVALGASLVSLALSLVMLAGFDTSAS------ 59 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q W+P G+S H +DG+S+L++VL+ LL + ++ SW I+ + + ++ Sbjct: 60 GMQFVERFEWLPALGVSYHFGVDGISVLLIVLSTLLTTIGIVASWSSIQHRVREYMITML 119 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + G++GVF+++D+FLF+ FWE+ML+PM LI +WG R+ AA KFF+YT A Sbjct: 120 MLETGMLGVFVSLDLFLFYIFWEVMLIPMALLIGVWGS-----ANRVYAAVKFFLYTLAG 174 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 L+ML+ I+AL ++ TG+ T + +L + + FFIAFA+K+P+ P H Sbjct: 175 SLLMLVGIIALYQSYFEQTGIRTLDVLQLQQGNYGYTFQMWVFAAFFIAFAIKVPMWPFH 234 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLPDAH +APTAGSV LAG+LLK YGLLRF+LPLFP+A+ ++AP+ + L VIGI YG Sbjct: 235 TWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFNLPLFPDAARDWAPVIIVLSVIGIIYG 294 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 A +A Q D+K+L+AY+SVSHMGFV + I+ + GA+I M++HGL + LF+ G Sbjct: 295 ALVALVQPDLKKLVAYSSVSHMGFVTLGIFAFNAQGLYGAMIVMLSHGLVTSALFLCVGV 354 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 +Y+R HTR + GGL + M + F A+LG+PG FVGEF+ + G+F+ Sbjct: 355 IYDRGHTRLISRFGGLATNMPVYASFLGLFTFASLGLPGLSGFVGEFLSILGAFRAERAA 414 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELP----------------------- 458 VI+ ++F++ Y L M R + +A + P Sbjct: 415 GVIAFLVVIFSAWYMLWMYQRVAWQRAPGEPPDANDPEAKLAGDEPRPVMGGAEHGGDVV 474 Query: 459 ------GMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWF 500 ++ RE + L VL + +G YPQ ++ +A+ + + F Sbjct: 475 DPRTFRDVTWREAMTLAPLAVLTIWMGVYPQWFMNFLRTALELVAKPF 522 >UniRef50_Q1IS53 Proton-translocating NADH-quinone oxidoreductase, chain M n=16 Tax=Bacteria RepID=Q1IS53_ACIBL Length = 559 Score = 431 bits (1108), Expect = e-119, Method: Composition-based stats. Identities = 188/501 (37%), Positives = 282/501 (56%), Gaps = 10/501 (1%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L ++ P G L + RWIA + +SL L ++ Sbjct: 6 ILSIVLFTPLAGAILLLMVPKENKNAIRWIANLAALAGFLVSLPLIPWFWAVKSEVTPYF 65 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 ++ WIP G L IDG+S L+++LT LLG +++L SW IE ++ + Sbjct: 66 KFAEGSTNNWIPSIGAGYQLGIDGISFLLIILTTLLGSISILSSWTAIENRVKEYYAWFL 125 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + G++GVF+A D FLFF FWE MLVPMY LI +WG G ++ AA KFF+YT A Sbjct: 126 LLQTGMLGVFMANDFFLFFVFWEAMLVPMYLLIGIWG-----GPRKLYAAIKFFLYTLAG 180 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTP--MSSGVEYLLMLGFFIAFAVKMPVVP 239 ++ML+ IL L F H+ TGV+TF+ E L T ++ L FF+ FA+K+P+ P Sbjct: 181 SVLMLLGILFLYFHHHTVTGVYTFSLEALYATAPLITGKAAIFLFFAFFVGFAIKVPMFP 240 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASA--EFAPIAMWLGVIG 297 H WLPDAH +APTAGSV LAG+LLK YGL+RFSLP FP + + + L +IG Sbjct: 241 FHTWLPDAHVEAPTAGSVILAGVLLKMGTYGLIRFSLPFFPAVATIKWVQALLITLSLIG 300 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 I YGA ++ Q D+K+L+AY+SVSH+GF + I+ +Q+ G+VIQ I HG+S LF+ Sbjct: 301 ILYGALVSLVQKDMKKLVAYSSVSHLGFCTLGIFVFTQMGIAGSVIQQINHGISTGALFL 360 Query: 358 LCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV 417 + G LYER HTR++ GG+ + M ++L ++++G+P FVGE I+ +F V Sbjct: 361 IVGILYERRHTREISEYGGISTVMPVYATIALIMFMSSMGLPLLNGFVGEMPIMMATFMV 420 Query: 418 VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVL 477 + + G+V A+ Y L + R +FG + +++L ++ REL + LV+L + Sbjct: 421 NKTWAIWAIPGVVLAAAYLLWLYQRVFFGTVTNP-KNEKLADLTPRELATFVPLVILALA 479 Query: 478 LGFYPQPILDTSHSAIGNIQQ 498 +G YPQP+ ++ Sbjct: 480 IGLYPQPLFKILDQPAAKLEA 500 >UniRef50_B1KJV9 Proton-translocating NADH-quinone oxidoreductase, chain M n=2 Tax=Shewanella RepID=B1KJV9_SHEWM Length = 537 Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 232/541 (42%), Positives = 345/541 (63%), Gaps = 42/541 (7%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 M+L L+++P IGGFL ++R P+WIA I +TLA + + L + Sbjct: 1 MMLLTLVILPLIGGFLACWSQRVHQDAPKWIAAICTLVTLAFLISIKLASNIE-----DL 55 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 W + WIPR I+ HLA+DGLS ++++LT L+G++ + +W EI +++GFF+ N Sbjct: 56 ELWLVDEPRAWIPRLNITAHLAMDGLSFVLLLLTLLMGLVGLSSAWSEINQHRGFFYGNY 115 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 +W L G+IGVFLA+D+ LFF FWE+MLVPMYFLIA+WG++ R AA KFF++TQA Sbjct: 116 LWTLAGIIGVFLAMDLLLFFVFWEVMLVPMYFLIAIWGNE-----NRRYAALKFFLFTQA 170 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 GL+ML++I+AL +HY TG+ +F+Y+ L+ +P+ S + + LGF IAF VK+P P Sbjct: 171 GGLLMLLSIIALTVIHYQQTGILSFDYQVLVQSPIQSELAKWICLGFIIAFIVKLPAFPF 230 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H WLPDAH+QAPT S+ LA +LLKT YGLLRF LPLFP ++ +AP+ M L + I Y Sbjct: 231 HTWLPDAHTQAPTPASIILAAVLLKTGGYGLLRFVLPLFPESAQFWAPLMMALAGVSIIY 290 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 GA MAF+QTD+KRL+AY+SVSHMGFVL+ ++ + A QGAV+QM+AHGLS + LF+L G Sbjct: 291 GAIMAFSQTDLKRLVAYSSVSHMGFVLLGCFSFNFYALQGAVMQMLAHGLSTSALFMLVG 350 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 + R HTRD+ +GGLW + L A+ LFF VA+LGMPG GNF+ E ++L G+F+ P+ Sbjct: 351 LIQHRFHTRDLNHLGGLWHTLPKLSAMGLFFGVASLGMPGMGNFIAELLVLLGTFKQAPI 410 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFG--------------------------------KA 448 ++++ GL+ A+VYSL M+ +++FG K Sbjct: 411 FAIVASSGLILAAVYSLRMIQKSFFGMNLKLETSLSDEKSSDNSSRDGIDNSSADLGAKH 470 Query: 449 KSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNSVTTTR 508 S ++ + +S++E ++L+ + L+++G +PQPI +S++ I + + Sbjct: 471 HSDAHTRYVTDLSVKEGLTLMLMCLGLIVMGLHPQPIFTLVNSSLMEILSLIQSPLQPES 530 Query: 509 P 509 P Sbjct: 531 P 531 >UniRef50_B9L177 Nadh-quinone oxidoreductase chain m n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L177_THERP Length = 524 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 187/525 (35%), Positives = 284/525 (54%), Gaps = 41/525 (7%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L + P +G + + + RWIAL+ ++ LS+ + + + Sbjct: 6 ILSLITYSPLVGAAILFLWGGASPRAARWIALLASSVSFLLSVVMLVAFDRDQS------ 59 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q W+P GI+ L +DG+S +V LT LL ++AVL SW I +++ L+ Sbjct: 60 TLQFTETFDWLPELGIAYRLGVDGISAPLVGLTTLLTLIAVLASWDPIRHRVREYYITLL 119 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + G++GVF+++D+FLF+ FWE++L+PM +I +WG R+ AA KFF+YT A Sbjct: 120 LLATGMLGVFVSLDLFLFYVFWEIVLIPMALIIGVWGS-----ANRVYAAVKFFLYTLAG 174 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 L+ML+ I+A+ ++ TG+ T + +L S ++ L FF+AFA+K+P+ P H Sbjct: 175 SLLMLVGIVAIYQEYFRQTGIRTLDVLQLAQGQYSEAFQFWTFLAFFLAFAIKVPMWPFH 234 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLPDAH +APTAGSV LAG+LLK YG LRF+LPLFP+A+ +AP + L VI I YG Sbjct: 235 TWLPDAHVEAPTAGSVILAGVLLKMGGYGFLRFNLPLFPDATRMWAPAIVVLSVIAILYG 294 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 A MA Q D K+L+AY+SVSHMGFV + I+ +Q GA++ M++HG + LF++ G Sbjct: 295 ALMALVQQDFKKLVAYSSVSHMGFVTLGIFVLNQPGLSGAMVVMLSHGFVTSALFLIVGV 354 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 LYER HTRD+ GGL M A F +A+LG+PG FVGEF+ L G F+ Sbjct: 355 LYERAHTRDLAAFGGLARNMPVFAAFFGLFTLASLGLPGLSGFVGEFLALLGGFRAYRWA 414 Query: 422 TVISTFGLVFASVYSLAMLHRAYF------------------------------GKAKSQ 451 V+ T ++ A+ Y L + R + Sbjct: 415 GVLGTIVVILAAWYMLRVYQRVALVRAPGEPPDPDDPERRLALAHGLPPIAGGSDGPHAY 474 Query: 452 IASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNI 496 + P ++ RE +L L +L + +G YP P+L+ A+ + Sbjct: 475 PDPRTFPDLTWREAVSLLPLALLTIWIGVYPLPLLEMLEPALAAL 519 >UniRef50_P57263 NADH-quinone oxidoreductase subunit M n=4 Tax=Buchnera aphidicola RepID=NUOM_BUCAI Length = 505 Score = 417 bits (1072), Expect = e-115, Method: Composition-based stats. Identities = 254/508 (50%), Positives = 371/508 (73%), Gaps = 4/508 (0%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 MLL LI+IPF+ F + + R PRWIAL + TL + +Q++ Q Y + Q Sbjct: 1 MLLSLLIIIPFLSSFFSFFSPRLHNNFPRWIALSGIIATLLVVIQIFFQENYHIFQIRHY 60 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 P W + +PWI RFGI ++A+DGLS++M++ + L ++A++CSW EI+K +GFF+ N Sbjct: 61 PNWNCQLIVPWISRFGIEFNIALDGLSIIMLIFSSFLSIIAIICSWNEIKKNEGFFYFNF 120 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 M + G+IGVF++ D+FLFF FWE+ML+PMYFLIALW K K AA KFF+Y+Q Sbjct: 121 MLVFTGIIGVFISCDLFLFFCFWEIMLIPMYFLIALWSDKTEKKKN-FLAANKFFLYSQT 179 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 SGL++L +IL LVF HY +T + TFNY L+N P++ VEY++M+GFF++FA+KMP+VP Sbjct: 180 SGLILLSSILLLVFSHYYSTNILTFNYNLLINKPINIYVEYIVMIGFFLSFAIKMPIVPF 239 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 HGWLPD HS++ + GSV++ G+LLKTA Y LLR++L LFP+++ F+ IA++ G+I IFY Sbjct: 240 HGWLPDIHSRSLSCGSVEIIGVLLKTAPYALLRYNLVLFPDSTKSFSLIAVFWGIISIFY 299 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 GAW+AF+QT+IKRLIAY+SVSHMG +LI IY+ ++ A QG VIQM+++ L+ A L IL G Sbjct: 300 GAWIAFSQTNIKRLIAYSSVSHMGLILIGIYSNNERALQGVVIQMLSNSLTVAALCILSG 359 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 Q+Y+R T+DM MGGLWS + W+P SLFF++A LG+PGTGNF+GEF+IL G F+V P+ Sbjct: 360 QIYKRFKTQDMSKMGGLWSCIYWIPGFSLFFSLANLGVPGTGNFIGEFLILSGVFEVFPL 419 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 +++++T G+VF+S+YSL ++ + ++G K I ++ ++ +E++ I+ LV LV LG Sbjct: 420 VSILATIGIVFSSIYSLNVIQKIFYGPCKQNI---KVFFINKQEVWTIIALVFTLVFLGL 476 Query: 481 YPQPILDTSHSAIGNIQQWFVNSVTTTR 508 PQ I+D S+++I NIQ+ F NS+ R Sbjct: 477 NPQKIIDVSYNSIHNIQKEFNNSILKIR 504 >UniRef50_A3ZKZ8 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZKZ8_9PLAN Length = 609 Score = 413 bits (1062), Expect = e-114, Method: Composition-based stats. Identities = 177/568 (31%), Positives = 277/568 (48%), Gaps = 69/568 (12%) Query: 4 PWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQ-LWLQGGYSLTQSAGIPQ 62 LI P L V R+ L+ + + L + L +++ Sbjct: 2 SALIFFPLAAAALISLIPGDQKNVIRFTTLLATLVMFGVVLFGMALPTNETISFDIETAG 61 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMW 122 Q+ +PWIP F I L DG+S +VVLT L+ LA+ SW IEK+ + + + Sbjct: 62 MQNVVSLPWIPSFNIDYFLGFDGISFPLVVLTALISALAMGASWT-IEKHVKGYCVLYLI 120 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 +L G++GVF+++D FLF+ FWE+ML+PMYFLI +WG G + AA KFF+YT Sbjct: 121 LLTGMMGVFVSLDFFLFYIFWEVMLLPMYFLIGVWG-----GPRKEYAAIKFFLYTLFGS 175 Query: 183 LVMLIAILALVF-----------------------------------------VHYNATG 201 ++ML+AIL + F + T Sbjct: 176 VLMLVAILMIYFNSDLRQLSPQQLVDSNVRLAGVEHLGAVDEHLAAATKYHETISAAETP 235 Query: 202 VWTFNYEELLNTP-----------MSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQ 250 V TFN L +++ + FI FA+K+P VP H WLPDAH + Sbjct: 236 VHTFNLLALQQLGQHSEVFDKELLFGKSLQWWAFVLLFIGFAIKVPSVPFHTWLPDAHVE 295 Query: 251 APTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTD 310 APT S+ LAG+LLK YG++R P+ P+A + A + +GVI + YGA+ A AQTD Sbjct: 296 APTPISMILAGVLLKMGGYGIIRICYPICPDAGYDLAWVVCSIGVISMIYGAFAALAQTD 355 Query: 311 IKRLIAYTSVSHMGFVLIAIYTGSQ----------LAYQGAVIQMIAHGLSAAGLFILCG 360 KR++AY+SVSHMG+V++ + S + +GA+ QMI HG+S+AG+F + G Sbjct: 356 FKRMVAYSSVSHMGYVVLGLGVWSATVVGDPVAWNMGVKGAMFQMIGHGISSAGMFFMVG 415 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 +Y+R+H R++ GGL+ KM ++++ A LG+PG F+GE ++ ++ Sbjct: 416 VIYDRVHHRNLNEFGGLFGKMPVYTSMAIIVFFAGLGLPGLCGFIGEAFVVLSVWKFSAG 475 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 + V F ++ + Y L + R Y G ++ L +++RE+ + + L VL +L G Sbjct: 476 LAVAGAFVVILTAGYILWAVQRVYLGAEYKGPHAEALTEINIREMAIAVPLCVLAILFGV 535 Query: 481 YPQPILDTSHSAIGNIQQWFVNSVTTTR 508 P + + I Q T+ Sbjct: 536 LPHTVFRYMDATIDQQVQDLATWTKETK 563 >UniRef50_Q2IN04 Proton-translocating NADH-quinone oxidoreductase, chain M n=6 Tax=Bacteria RepID=Q2IN04_ANADE Length = 542 Score = 410 bits (1055), Expect = e-113, Method: Composition-based stats. Identities = 196/504 (38%), Positives = 299/504 (59%), Gaps = 20/504 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL + +P +G R R +AL+ +T ALSL LW + S G P Sbjct: 3 LLTVVTFLPLLGALAMVLVPRDEPSQHRALALVVSLVTFALSLGLW----FGFDASPGAP 58 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 ++Q E +PW+P GI H+ +DG++LL+ +LT +L + VL +WK + F + L+ Sbjct: 59 EFQFELMIPWMPTIGIGFHVGLDGVALLLFMLTTVLMPVVVLSAWKAVGDRVKEFMIALL 118 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + ++G F+A+D+ LF+ FWE ML+PMY LI +WG + R+ A KFF+YT A+ Sbjct: 119 VLESAMLGTFIALDLVLFYVFWEAMLIPMYLLIGIWGSQ-----NRLYATVKFFVYTFAA 173 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELL-NTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 ++ML+AIL + F TF+Y E ++ G L L F +AFAVK+P+ PL Sbjct: 174 SVLMLLAILYVYFHDGG-----TFDYVEARRALAVTPGAASWLFLAFALAFAVKVPMFPL 228 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H WLPDAH++APTAGSV LAG+LLK +G R++LPLFP A+ + + L VIGI Y Sbjct: 229 HTWLPDAHTEAPTAGSVILAGVLLKMGTFGFFRYALPLFPEAALQHRNLVAVLAVIGIIY 288 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 GA M+ QTD+KRL+AY+SVSH+GFV++ + S G+V QM+ HG+S LF+L G Sbjct: 289 GALMSLVQTDMKRLVAYSSVSHLGFVMLGLMALSAEGMTGSVYQMLNHGVSTGALFLLVG 348 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV--- 417 LYER HTR + GG+ ++ + A + ++++G+PGT FVGEF+IL G++ Sbjct: 349 MLYERRHTRLISEYGGIAKRVPVIAAAFVIVTLSSIGLPGTNGFVGEFLILSGTWLSRLG 408 Query: 418 -VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLV 476 V ++ G++ +VY L ++ + +FG A+ LP +S+RE F++ ++ L+V Sbjct: 409 GSAVFATVAALGVILGAVYMLLLVEKVFFG-PNQNAANHHLPDLSVREGFVLAPMIALIV 467 Query: 477 LLGFYPQPILDTSHSAIGNIQQWF 500 ++G P P L + A+ + Q F Sbjct: 468 VMGLLPGPFLAPAKPAVDRLIQRF 491 >UniRef50_B1ZA34 Proton-translocating NADH-quinone oxidoreductase, chain M n=159 Tax=cellular organisms RepID=B1ZA34_METPB Length = 527 Score = 409 bits (1053), Expect = e-113, Method: Composition-based stats. Identities = 186/502 (37%), Positives = 279/502 (55%), Gaps = 22/502 (4%) Query: 8 LIPFIGGFLCWQTERFGVKV---PRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQ 64 ++P G V RW ALIT +T LSL W + P +Q Sbjct: 12 IVPLAGAAFILTLGEETAAVKRNARWAALITTVVTFLLSLVAWAR------YDIASPSFQ 65 Query: 65 SEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWIL 124 W+ I L +DG S+ +++LT L + SW +E + + + + Sbjct: 66 LVESHAWLAE-TIRFKLGVDGFSMPLILLTTFLMPFCIGASWLSVENRVKEYFVAFLVLE 124 Query: 125 GGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLV 184 +IGVF A+D+ LF+ F+E L+PM+ +I +WG GK RI A+ KFF+YT ++ Sbjct: 125 TTMIGVFCALDLVLFYLFFEAGLIPMFLIIGIWG-----GKRRIYASFKFFLYTLLGSVL 179 Query: 185 MLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWL 244 ML+AI+A+ + T + LL G+++ L L FF +FAVKMP+ P+H WL Sbjct: 180 MLLAIMAMYWE------AGTTDIPTLLAHRFPVGLQWWLWLAFFASFAVKMPMWPVHTWL 233 Query: 245 PDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWM 304 PDAH +APTAGSV LAGILLK YG +R SLP+ P+ASA FAP+ L VI I + + Sbjct: 234 PDAHVEAPTAGSVILAGILLKMGGYGFIRISLPMLPDASASFAPLVFALSVIAIIFTSLT 293 Query: 305 AFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYE 364 A QTDIK+LIAY+SV+HMGFV + ++T ++ QGA+ MI+HG+ + LF+ G +Y+ Sbjct: 294 AMMQTDIKKLIAYSSVAHMGFVTLGLFTLNEQGIQGALFLMISHGIVSGALFLCVGVVYD 353 Query: 365 RIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVI 424 R+HTR++ GGL +M A + F +A +G+PGT FVGEF+ + G+F+ P + Sbjct: 354 RMHTREIAAYGGLVKRMPLYAAAMMVFTMANVGLPGTSGFVGEFLAMMGAFRANPTVAFF 413 Query: 425 STFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQP 484 S FG++ ++ Y+L + R +GK Q + + RE +I LV L + G +P P Sbjct: 414 SVFGIILSAGYALWLYARVIYGKLDKPNL-QGILDLDNREKIIIAPLVALTIWYGVHPAP 472 Query: 485 ILDTSHSAIGNIQQWFVNSVTT 506 +LDT + + Q ++ Sbjct: 473 VLDTFAPSTEALMQNMRAALAN 494 >UniRef50_D2R5F8 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5F8_9PLAN Length = 600 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 189/550 (34%), Positives = 272/550 (49%), Gaps = 55/550 (10%) Query: 7 ILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSE 66 + +P G L W G R+ AL TL + + + A Sbjct: 9 VFLPLAGAILMWILAPLGKNAVRFGALGVTLATLVCTAIVVASFPADGAKGAEFCTVDWP 68 Query: 67 FDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGG 126 + I LA+DGL L M L+ LL V AVL SW+ I++ + F L+ + G Sbjct: 69 WLAQSGSLLDIRFSLALDGLGLWMFGLSALLMVTAVLVSWEAIKEREALFFGMLLLLEFG 128 Query: 127 VIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVML 186 +GVF A D+ LF+ F+E L+P++FLI +WG + R AA+KFF+YT A L+ Sbjct: 129 CLGVFTARDLILFYVFFEFTLIPLFFLIGIWGSE-----DRKYAASKFFLYTLAGSLLTF 183 Query: 187 IAILALVFVHYNATGV--WTFNYEELLNT----PMSSGVEYLLMLGFFIAFAVKMPVVPL 240 + +L +V Y GV F+ EL T P+ + + + F FA+K+P+ PL Sbjct: 184 LGLLVIVVWCYQQEGVGKLVFSIPELTATLRDAPLPPAWQLAVFIALFAGFAIKVPLFPL 243 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H WLP AH QAPTAGSV LAG+LLK YG LRFS+P+ P+A+ P +WL VIGI Y Sbjct: 244 HTWLPLAHVQAPTAGSVILAGVLLKIGVYGFLRFSVPMLPDATVTCMPYLLWLSVIGIIY 303 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 GA +A AQ D+KRLIAY+SVSH+G+ + ++ + L QG+V+QM+ HGLS GLF + G Sbjct: 304 GALVALAQGDMKRLIAYSSVSHLGYCTLGLFALNPLGVQGSVLQMVNHGLSTGGLFAVIG 363 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 LYER HTR+++ +GGL + WL L F +++G+PG F GEFMIL G FQ Sbjct: 364 MLYERYHTREIKQLGGLARQTPWLSFFMLIFTFSSIGLPGLNGFPGEFMILLGMFQRAWA 423 Query: 421 ------------ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQE------------ 456 I V++ G+V + Y L ++ +FG K Sbjct: 424 QSSVENFSQLMTIAVLAVTGVVLGAWYMLWLVQHVFFGPLKEPADDHGHAPVAVAASQGH 483 Query: 457 --------------------LPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNI 496 +P + RE F + L V ++ +G P L + Sbjct: 484 DSHSHNGHGHGHDDHGTGSTVPDLKWREFFALAPLCVFVLWIGLRPGDFLSRMQPTLTQA 543 Query: 497 QQWFVNSVTT 506 Q + + + Sbjct: 544 TQLASDKLAS 553 >UniRef50_Q1NQL7 Proton-translocating NADH-quinone oxidoreductase, chain M n=4 Tax=Bacteria RepID=Q1NQL7_9DELT Length = 507 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 189/494 (38%), Positives = 283/494 (57%), Gaps = 18/494 (3%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L L+ +P +G + G R ALI +T +S+ L+ S Sbjct: 13 LSALVFLPLLGALVMLALP--GDNACRNWALIVTVITACVSMPLFFLFDRSTH------L 64 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMW 122 +Q WI + I+ L IDG+SLL+V++T L+ L VL SW+ I+K F + L+ Sbjct: 65 YQFGEHHTWIEAWNINYTLGIDGISLLLVLMTTLIMPLCVLGSWRYIQKRVKEFMICLLL 124 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 + ++GVF+A+D LF+ FWE ML+PMY LIA+WG G R+ A+ KFF+YT A Sbjct: 125 METAMLGVFMALDFVLFYIFWEAMLIPMYLLIAVWG-----GPRRMYASIKFFLYTLAGS 179 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 +++L+AI+AL + TF+ L+ S+ + + L FF+AFA+K+P+ P H Sbjct: 180 VMLLVAIIALFL----TSEPQTFSIPLLMEQSYSTTFQIWVFLAFFLAFAIKVPMFPFHT 235 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGA 302 WLP AH +APTAGSV LA +LLK YG LRF LP+ P A+ F P +WL +IGI YG Sbjct: 236 WLPAAHVEAPTAGSVILASVLLKMGTYGFLRFCLPITPEATHIFMPYILWLSIIGILYGG 295 Query: 303 WMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQL 362 + A AQ D+K+LIAY+SV HMGFV + I+ + QGA++QMI HG++ LF G L Sbjct: 296 FTALAQQDMKKLIAYSSVGHMGFVTLGIFVLNSQGIQGAILQMINHGITTGALFFCVGML 355 Query: 363 YERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVIT 422 YER H+R++ + G+ M FFA+++L PGT +F+GEFMIL GSF +I Sbjct: 356 YERTHSRELALNAGVGRFMPIYVLFLGFFALSSLAFPGTNSFIGEFMILAGSFSYSIIIA 415 Query: 423 VISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYP 482 + G V A+ Y +L R +G + + L ++LRE+ ++ L++ + +G P Sbjct: 416 AFAIPGAVLAAAYMFRLLQRVVWGGTDNP-EHRGLLDLNLREVVVLAPLLLFVFWIGLSP 474 Query: 483 QPILDTSHSAIGNI 496 P L+ ++ ++ Sbjct: 475 APFLEVMEVSVAHL 488 >UniRef50_Q6MGN7 NADH dehydrogenase I chain M n=3 Tax=Bacteria RepID=Q6MGN7_BDEBA Length = 517 Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 180/515 (34%), Positives = 285/515 (55%), Gaps = 21/515 (4%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 M+L ++ +P + L + R +AL + +SL L+ S T Sbjct: 1 MILSSIVFLPLLFALLVAIWPKANT--VRHLALGLSVIEFIVSLSLFKNFDASAT----- 53 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 Q WI RFGI + IDG+SL +V+LT L + +L SW I + FH+ + Sbjct: 54 -GLQMVEKFMWIERFGIQYFMGIDGISLWLVLLTTFLTPIIILASWTSITERVKGFHVCM 112 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + ++G FLA+D F+ FWE+ LVPMYF++ +WG G RI A KFFIYT A Sbjct: 113 FILQTAMLGTFLAMDAVFFYVFWELSLVPMYFMVGIWG-----GARRIYATVKFFIYTMA 167 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSS------GVEYLLMLGFFIAFAVK 234 ++ML+AI+ ++++ ATG + + + + ++ LL F +AFA+K Sbjct: 168 GSVLMLVAIIYMMYLTQEATGQMSASLLDFYQLQIPFVGGTFFSLQTLLFFAFALAFAIK 227 Query: 235 MPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLG 294 +P P+H WLPDAH +APT GSV LAG++LK YG +R+ +PLFP AS +A + M +G Sbjct: 228 VPAFPVHTWLPDAHVEAPTPGSVILAGVMLKMGTYGFMRWVIPLFPEASEYWAWLFMLIG 287 Query: 295 VIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAG 354 +GI YGA +A Q D+K+L+AY+SVSHMG++L+ ++ + G + QM+ HG+S Sbjct: 288 TVGIIYGALVAMVQPDVKKLVAYSSVSHMGYILLGLFAFNAYGMGGGLYQMLNHGISTGA 347 Query: 355 LFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGS 414 LFIL G +YER H+R++ GGL + ++++ +P T FVGEF IL G+ Sbjct: 348 LFILIGMIYERTHSREISKYGGLAGVLPIFTIFFFIITLSSIAVPMTNGFVGEFFILLGT 407 Query: 415 FQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELP--GMSLRELFMILLLV 472 +Q PV + G+V +VY L M R +FG+ + + P ++ RE+ +++ LV Sbjct: 408 YQAHPVFAYFAVSGVVLGAVYMLWMFKRVFFGEQGELVKDEHHPLHDLNAREITVLVPLV 467 Query: 473 VLLVLLGFYPQPILDTSHSAIGNIQQWFVNSVTTT 507 +++ +G +P L+ S ++I ++ N T Sbjct: 468 IMVFWMGLFPNHFLNFSKASIDHLVNNRSNYNLTI 502 >UniRef50_P93313 NADH-ubiquinone oxidoreductase chain 4 n=140 Tax=cellular organisms RepID=NU4M_ARATH Length = 495 Score = 403 bits (1037), Expect = e-111, Method: Composition-based stats. Identities = 177/497 (35%), Positives = 279/497 (56%), Gaps = 17/497 (3%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L LIL P +G + +++ R I L +T SL LW+Q + + Sbjct: 12 LSGLILCPVLGSIILLFIPNSRIRLIRLIGLCASLITFLYSLVLWIQFD------SSTAK 65 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMW 122 +Q + W+P I+ +L IDG+SL V+LT L + +L W + Y + + + Sbjct: 66 FQFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYIIAFLI 125 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 +I VF +D+ LF+ F E +L+PM+ +I +WG + + +I AA +FF+YT Sbjct: 126 CEFLMIAVFCMLDLLLFYVFPESVLIPMFIIIGVWGSR----QRKIKAAYQFFLYTLLGS 181 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 L ML+AIL ++F T + + LL T S + L + FF +FAVK+P+VP+H Sbjct: 182 LFMLLAILLILFQ------TGTTDLQILLTTEFSERRQIFLWIAFFASFAVKVPMVPVHI 235 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGA 302 WLP+AH +APTAGSV LAGILLK YG LRFS+P+FP A+ F P L I I Y + Sbjct: 236 WLPEAHVEAPTAGSVILAGILLKFGTYGFLRFSIPMFPEATLCFTPFIYTLSAIAIIYTS 295 Query: 303 WMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQL 362 Q D+K++IAY+SV+HM V I +++ + G+++ M++HGL ++ LF+ G L Sbjct: 296 LTTLRQIDLKKIIAYSSVAHMNLVTIGMFSPNIQGIGGSILLMLSHGLVSSALFLCVGVL 355 Query: 363 YERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVIT 422 Y+R TR +R GGL S M + F +A + +PGT +F+GEF+IL G+FQ ++ Sbjct: 356 YDRHKTRLVRYYGGLVSTMPNFSTIFFSFTLANMSLPGTSSFIGEFLILVGAFQRNSLVA 415 Query: 423 VISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYP 482 ++ G++ + YSL + +R G K + ++ RE+F+ + +V LV +G YP Sbjct: 416 TLAALGMILGAAYSLWLYNRVVSGNLKPDFL-HKFSDLNGREVFIFIPFLVGLVWMGVYP 474 Query: 483 QPILDTSHSAIGNIQQW 499 + LD H+++ N+ Q Sbjct: 475 KVFLDCMHTSVSNLVQH 491 >UniRef50_B0BZT1 Proton-translocating NAD(P)H-quinone oxidoreductase, chain M n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0BZT1_ACAM1 Length = 490 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 189/504 (37%), Positives = 292/504 (57%), Gaps = 18/504 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL +I P +G + + + +WI+L M + AL+ +LQ + T Sbjct: 5 LLSLIIFSPLVGAVIILLLPKAQESLYKWISLANMVVVSALTFAAFLQFDPNQT------ 58 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 +Q WIP+ + L DG+S MVVLT L+ LA + S+ I+K + ++ + Sbjct: 59 GFQLVEKTLWIPQLNVYYLLGTDGISFPMVVLTALISTLASIGSFS-IKKREKEYYCLYL 117 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 +++ G++G FLA+DM LF+ FWE++LVPMYFLI +WG G + AA KFF+YT A Sbjct: 118 FLVTGMMGTFLALDMILFYVFWEVVLVPMYFLIGIWG-----GPRKEYAAMKFFLYTFAG 172 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 L+ML+ IL + F + TFN EL+ S G + ++ L F+ FAVK+P P H Sbjct: 173 SLLMLVGILGMYF----NSAPHTFNIMELVAQDFSFGFQKIVFLALFVGFAVKVPTFPFH 228 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLPDAH +APT SV LAG+LLK YG RFS P+ P A+ F P L IGI YG Sbjct: 229 TWLPDAHVEAPTPISVILAGVLLKMGTYGFFRFSFPILPEAANWFRPYLAVLAAIGIVYG 288 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 ++A AQTD K+++AY+S+SHMGFVL+ + S + GA++QM +HG+ LF+L G Sbjct: 289 GFIALAQTDFKKMVAYSSISHMGFVLLGLAAFSTNGFNGAMLQMFSHGVITGALFLLVGV 348 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 +Y+R HTRDM GGL +++ +FF++A+LG+PG FV EF++L GS++ + Sbjct: 349 IYDRAHTRDMNAFGGLNAQLPVYSGFLVFFSLASLGLPGLSGFVSEFLVLLGSYEYSKLY 408 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 T + G++ A+ Y L M+ R G A + S LP +++RE+ ++ L+++ + +G Y Sbjct: 409 TAFACMGILLAACYLLFMVRRVLLGPANPKWES--LPDINMREVVTVVPLLIITLGIGIY 466 Query: 482 PQPILDTSHSAIGNIQQWFVNSVT 505 P+ +L + ++ ++ Sbjct: 467 PRYLLSFFIPTLQDLLASIGGTLM 490 >UniRef50_B5YKJ1 NADH-quinone oxidoreductase chain m n=15 Tax=cellular organisms RepID=B5YKJ1_THEYD Length = 538 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 190/505 (37%), Positives = 291/505 (57%), Gaps = 19/505 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L LI P G L R ++ ++ ALI + S+ L++ + +Q Sbjct: 47 ILSTLIFFPVAGAALIAIIPRDKEELIKFSALIISIVEFIFSIPLYISFNKTTSQ----- 101 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q + + WIP +GI +L +DG+S+L ++L+ LL +L V SWKEI++ F+ L+ Sbjct: 102 -MQFKEEHLWIPEWGIKYYLGVDGISILFILLSSLLTILCVTVSWKEIDRKIKEFYAALL 160 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 +IGVF+++D+FLF+ FWE ML+PMY +I +WG G RI +A KFF+YT Sbjct: 161 ITHSAMIGVFMSLDIFLFYIFWEAMLIPMYLIIGIWG-----GPRRIYSAIKFFLYTFIG 215 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 ++ML+ IL L F T + L+ ++ L FF AFAVK+P+ P+H Sbjct: 216 SVLMLVGILVLYF------HTGTSDILSLMKNSYPYKMQLWLFWAFFAAFAVKVPMWPVH 269 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLPDAH++APTAGSV LAG+L+K AYG LRF+LP+FP A+ P M L VI I YG Sbjct: 270 TWLPDAHTEAPTAGSVILAGVLIKMGAYGFLRFNLPMFPEATLAMKPFMMILSVIAIIYG 329 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 A + Q D+KRLIAY+SVSHMGFV + I+ +Q QG +IQM+ HG+ LF+ G Sbjct: 330 ALICLIQKDLKRLIAYSSVSHMGFVTLGIFALNQQGIQGGIIQMLNHGVVTGALFLCIGI 389 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 +Y+R HTR + GG+ + M A + F +A++G+PGT F+GEF+IL G+F+ ++ Sbjct: 390 VYQRTHTRQIAHYGGVATVMPAYSAFFMIFTLASIGLPGTNGFIGEFLILLGTFKAWKLM 449 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIAS--QELPGMSLRELFMILLLVVLLVLLG 479 +++ L+ + Y L + R +F K + ++ RE+ +L LV++++ +G Sbjct: 450 CILAATALIIGAAYMLWLYQRVFFEKTNPEFLQHIHGYSDLNSREIVTLLPLVLVVLWIG 509 Query: 480 FYPQPILDTSHSAIGNIQQWFVNSV 504 FYP +L ++ + SV Sbjct: 510 FYPNALLSFMDVSVKELINHVTQSV 534 >UniRef50_Q7VRW3 NADH dehydrogenase I chain M n=2 Tax=Gammaproteobacteria RepID=Q7VRW3_BLOFL Length = 509 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 269/506 (53%), Positives = 369/506 (72%), Gaps = 12/506 (2%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWL--------QGGY 52 MLLP LIL+PF G + WQ++R V +PRWIAL + + LWL Sbjct: 1 MLLPTLILVPFFVGIISWQSDRINVCMPRWIALFGSSMVFVVGFFLWLWRMGYCNNLVLD 60 Query: 53 SLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKE--IE 110 +L + W E+ WIPRFGI+ HLA+DGLS+LM++LTG+LGV+AVL SW+ + Sbjct: 61 NLLKLNKSSVWDLEYMCTWIPRFGINFHLALDGLSVLMLMLTGILGVMAVLSSWENSVTD 120 Query: 111 KYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITA 170 ++G F+ NL+WILG VIGV LA+DMFLFFFFWE++L+P+YFLI++WG++ + K RI A Sbjct: 121 HHKGLFYCNLLWILGSVIGVILAVDMFLFFFFWEIVLIPIYFLISIWGYEELNKKLRIIA 180 Query: 171 ATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIA 230 ATKF +Y Q SGL MLI+I+ LV+ +Y G+W+F+YE LL+ + +EY LMLGFF A Sbjct: 181 ATKFCLYAQLSGLCMLISIIILVYFNYRLYGIWSFDYENLLHVTLPKNIEYFLMLGFFCA 240 Query: 231 FAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIA 290 FA+KMP+VP H W +A++ +P GSVDL G L+K + YG RF LPL PNAS EF PIA Sbjct: 241 FAIKMPIVPFHTWSLEAYAYSPITGSVDLIGFLVKISIYGFFRFVLPLCPNASKEFVPIA 300 Query: 291 MWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGL 350 M+LG++ IFYGAWMAFAQTD KRLIAY+++SHMGF LIAIY+ QL+YQG ++QMI+ L Sbjct: 301 MFLGILNIFYGAWMAFAQTDFKRLIAYSNISHMGFALIAIYSNDQLSYQGVLVQMISCSL 360 Query: 351 SAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMI 410 + +G+ ILCGQLY+R++TR++ +MGGLW +M +PA L F V+ L +PGTGNF+GE I Sbjct: 361 TLSGMCILCGQLYKRLYTRNITVMGGLWGRMNLMPAFFLCFIVSMLSIPGTGNFIGEVTI 420 Query: 411 LFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILL 470 L GSF VP+IT+I++FG++FAS+YSL ++ R Y+GK SQI+ + L M+ E F+I++ Sbjct: 421 LLGSFHTVPIITIIASFGILFASIYSLVLMQRIYYGK--SQISCEILLDMTFLEKFIIIV 478 Query: 471 LVVLLVLLGFYPQPILDTSHSAIGNI 496 L++ ++++G +PQ I DTS I NI Sbjct: 479 LLLCVLIVGCFPQFIFDTSRETIRNI 504 >UniRef50_B0SFU4 NADH dehydrogenase (Ubiquinone), M chain n=6 Tax=Leptospira RepID=B0SFU4_LEPBA Length = 579 Score = 399 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 180/491 (36%), Positives = 281/491 (57%), Gaps = 14/491 (2%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L +I +P + FL +R G V I+ ++ T LSL L+ S AG+ Sbjct: 5 ILSIIIFLPIVSTFLIVIQKRVGAVVV--ISALSSAFTTILSLGLFFFYDAS---KAGLQ 59 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 D + + H+ +DG+SLL+ LT + L+ + SW I K FH+ L+ Sbjct: 60 FVHWIPDWILSGKLSVDYHVGLDGVSLLLFALTTFMFFLSSIASWSNIPKKIKEFHICLL 119 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + V+GVF + ++ LF+ FWE+M++PM +I +WG G+ R AA K+F+++ A Sbjct: 120 VLETAVLGVFASGNLVLFYVFWELMVLPMVLMIGIWG-----GEERTKAALKYFLFSMAG 174 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 L ML IL L F T + + + L S +++ L FF+AFA+K+P+ P H Sbjct: 175 SLFMLGGILTLYFKT-GKTSIESLSTASLAL--YSEPLQWFLFFSFFLAFAIKIPLFPFH 231 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 W+PD H+QAPT GSVDLAG+LLK AYG +RF +P FP S L VIGI YG Sbjct: 232 TWMPDVHTQAPTVGSVDLAGVLLKIGAYGFIRFCIPFFPEQSLLSQNGIQILAVIGIVYG 291 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 + A QTDIKR+IAY+S+SH+GF ++ I++ + G ++QM++HG+S +F++ G Sbjct: 292 SMAALVQTDIKRIIAYSSLSHLGFCILGIFSFTTEGVVGGMLQMVSHGISTGMIFLMIGM 351 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 +YER HTR++ GGL +M L ++++G+PGT FVGEF+IL G+ + + Sbjct: 352 IYERAHTRNISEFGGLAGQMPVFSTFFLIAVLSSIGLPGTNGFVGEFLILIGAIKSNVWL 411 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 I+ G+V ++Y L + R FG +K+ I ++ +S RE+ ++ LVVL+ +G Y Sbjct: 412 GGIAATGVVLGALYLLWFVKRFLFGVSKT-IQAKPYKDLSFREIGILSPLVVLIFWIGLY 470 Query: 482 PQPILDTSHSA 492 P+P L +S+ Sbjct: 471 PKPFLSILNSS 481 >UniRef50_Q3BRP1 NADH-ubiquinone oxidoreductase NQO13 subunit n=10 Tax=Xanthomonas RepID=Q3BRP1_XANC5 Length = 500 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 182/516 (35%), Positives = 280/516 (54%), Gaps = 33/516 (6%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL LI +P IGG L + RW +L T ALSL L L Sbjct: 6 LLSILIWLPIIGGALILALR--NAETARWASLAVAVATFALSLPL-------LGYDTAND 56 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q WIP + I +L +DG+++ ++VLT L+ VLA++ +W+ I+K + + Sbjct: 57 AMQFIELHTWIPAYNIGYNLGVDGIAVALIVLTTLVTVLALIGAWRSIDKRVNQYVAAFL 116 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + G +G+F A D LF+ F+E ML+PM+ +I +WG G RI AA KFF+YT Sbjct: 117 ILEGVTVGIFAATDAMLFYVFFEAMLIPMFLIIGVWG-----GPRRIYAAMKFFLYTFLG 171 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 ++ML+ ++ L +F +L +++ + + F IAFAVK+P+ P+H Sbjct: 172 SVLMLVGLVYLYLKG------GSFQLADLYALQLTAKEQTWIFFAFLIAFAVKVPMFPVH 225 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLPDAH +APTAGSV LA I LK YG LRF+LP+ P+AS EFA + + L +I + Y Sbjct: 226 TWLPDAHVEAPTAGSVILAAIALKIGGYGFLRFNLPIVPDASHEFAWLVITLSLIAVIYV 285 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQ------------LAYQGAVIQMIAHG 349 +A Q D+K+L+AY+S++HMGFV + + L QGA++QMI+HG Sbjct: 286 GLVALVQDDMKKLVAYSSIAHMGFVTLGTFIAFTLVREYGSTDAARLGLQGAMVQMISHG 345 Query: 350 LSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFM 409 + +F G LY+R+HTR + GG+ + M W S+ F +A G+PGT FVGEFM Sbjct: 346 FVSGAMFSCIGVLYDRMHTRRIADYGGVVNVMPWFATFSMLFFMANAGLPGTSGFVGEFM 405 Query: 410 ILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMIL 469 ++ SFQ P++ + LV + Y+L + R +FG+ + + EL ++ RE F++ Sbjct: 406 VILASFQKHPLVAFGAATTLVITAAYTLWLYKRVFFGEVANAHVA-ELKDINGREAFVLG 464 Query: 470 LLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNSVT 505 + ++ LG YP+P+ D +I + + Sbjct: 465 VFAAGVLALGLYPKPLTDLMEPSIAKLATQIAATKL 500 >UniRef50_Q02CT2 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02CT2_SOLUE Length = 518 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 180/484 (37%), Positives = 268/484 (55%), Gaps = 12/484 (2%) Query: 15 FLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPR 74 + R AL+ A SL L G+ Q D+PWI Sbjct: 17 VALAIPRSVSAQGSRMWALLCSLGIFAASLGLLAWFD------RGLSGEQFAIDVPWISS 70 Query: 75 FGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAI 134 I ++ +G+S+ +V+L+ LL L VL SW I F+ L+ + G++GVFLA Sbjct: 71 PNIHFAISANGVSIWLVLLSTLLTPLCVLVSWNSIHDRTKEFYAFLLLLEFGLVGVFLAQ 130 Query: 135 DMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVF 194 D+FLF+ FWE+ LVPMYF+I +WGH RI AA KFF+YT A ++ML AI+ + Sbjct: 131 DLFLFYVFWEIALVPMYFMIGIWGH-----DRRIYAAVKFFLYTMAGSVLMLAAIIYIYN 185 Query: 195 VHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTA 254 + G + LL L FF+AFA+K+P+ PLH WLPDAH +APTA Sbjct: 186 KTQTFSYPAILEMLSNGRLSFPPGEQMLLFLAFFLAFAIKVPLFPLHTWLPDAHVEAPTA 245 Query: 255 GSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRL 314 GS+ LA ++LK YG+L F LP+FP+A+ AP L +IGI YGA +A Q ++K+L Sbjct: 246 GSIMLASVMLKMGTYGILHFCLPMFPSAARACAPWITVLAIIGIIYGALVAMVQPNMKKL 305 Query: 315 IAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMM 374 +AY+SVSH+GFV++ I+T +Q GAV QM+ HG+S LF++ G LYER H+ ++ Sbjct: 306 VAYSSVSHLGFVVLGIFTFTQPGLDGAVYQMLNHGISTGALFLVVGLLYERNHSLEINSY 365 Query: 375 GGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASV 434 GG+ + WL L +A++G+P NFVGEF++L G+ V ++ G++ ++ Sbjct: 366 GGVATVAPWLSVAFLITTLASVGLPTLNNFVGEFLVLQGAAIANFPWAVWASIGVILSAC 425 Query: 435 YSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIG 494 Y L M R ++G+ + + P ++LRE IL L+ ++V +G + Q L Sbjct: 426 YMLWMYQRVFYGEVNPHV-REHTPDLNLREWAAILPLIAMMVWMGVFSQSFLPPVSQNTA 484 Query: 495 NIQQ 498 I + Sbjct: 485 RILK 488 >UniRef50_A9B6Y1 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B6Y1_HERA2 Length = 517 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 191/514 (37%), Positives = 288/514 (56%), Gaps = 26/514 (5%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L ++ +P +G + R R AL L A+SL + + Sbjct: 11 ILSLVVFLPAVGAIILAFM-RGQRGAARIFALGWSTLVFAVSLPILFNFKHD------AA 63 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q WIP +G+ L +DG+SL +V+LT + LA+ +W +E+ F + ++ Sbjct: 64 GLQFYEYFNWIPDWGVRYELGLDGISLWLVLLTTFVTPLAIWSAWN-VEEKTNNFLMLIL 122 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 G++GVFLA D+FLF+ FWE L+PMYFLI +WG GK RI A KFF+YT A+ Sbjct: 123 LQEMGMLGVFLAQDLFLFYIFWEFTLIPMYFLIGMWG-----GKRRIYATVKFFLYTFAA 177 Query: 182 GLVMLIAILALVFVHY----------NATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAF 231 + MLI I+AL ++Y + + +S LL L FF+AF Sbjct: 178 SVFMLIGIIALGLLNYKYLAQQGLPTDTAFQVQTLMANINQFGLSDTELKLLFLSFFVAF 237 Query: 232 AVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAM 291 AVK+P+ P+H WLPDAH +APTAGSV LA +LLK YG++RF + LFP + E+A Sbjct: 238 AVKVPLWPVHTWLPDAHVEAPTAGSVILAAVLLKMGGYGMIRFCVQLFPQIAQEWARPIA 297 Query: 292 WLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLS 351 L VIGI YGA +++AQ+DIK+L+AY+SVSHMGF+++ I+ +++ QGAV+QMI HGLS Sbjct: 298 LLAVIGIIYGAVLSYAQSDIKKLVAYSSVSHMGFIVLGIFALNEVGLQGAVLQMINHGLS 357 Query: 352 AAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMIL 411 LF+L G +YER HTR++ GGLW + LF +A++G+PG FVGEF+I+ Sbjct: 358 TGALFLLIGMVYERTHTRELADYGGLWKVVPVFVYFLLFATMASVGLPGLNGFVGEFLIM 417 Query: 412 FGSFQ--VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMIL 469 G+F + T + G++ A+VY L M G + L ++ RE+ ++L Sbjct: 418 LGAFDSPIGWTFTAFAAVGVILAAVYLLKMFQGIASGPFSERRTPH-LSDLTRREVAILL 476 Query: 470 LLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNS 503 L +L++++G Y + I ++ + N+ Sbjct: 477 PLCILMLVIGLYSSYFTRPMETTIKALEAFVANA 510 >UniRef50_Q2S2L1 NADH dehydrogenase i, m subunit n=7 Tax=Bacteria RepID=Q2S2L1_SALRD Length = 545 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 204/509 (40%), Positives = 302/509 (59%), Gaps = 17/509 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 L ++ +P G L R RW AL T +T LS+ L++ GY + S + Sbjct: 7 LTSLVVFLPAAGALLTLFLRR--ASAIRWTALATTTVTFVLSIGLFV--GYDPSVSTALG 62 Query: 62 QWQSEFDMPWIPR-FGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 ++ W+P + + + +DGLSLL+V+LT LLG + VL SW I + ++ L Sbjct: 63 PQLADVWAGWLPDGYDVKYFVGVDGLSLLLVMLTTLLGPIVVLSSWTYIGEKHKGYYALL 122 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + + G+ GVF + D+ LF+ F+E+ L+PMYF+I +WG GK RI AA KF IYT Sbjct: 123 LLLQTGITGVFTSFDLLLFYIFFELTLIPMYFIIGIWG-----GKERIYAAVKFVIYTLV 177 Query: 181 SGLVMLIAILALVFVHYNA--TGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 L+ML+ IL L + +A GV+T ++ LL + V+ L F +FA+K+P+ Sbjct: 178 GSLLMLVGILYLGYAAGDAVNNGVFTTDWYTLLEYNIPLAVQGWLFAVFAFSFAIKVPLF 237 Query: 239 PLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 PLH WLPDAH QAPT GSV LAG+LLK YGLLRF LPLFPN + +A + + +IGI Sbjct: 238 PLHTWLPDAHVQAPTGGSVILAGVLLKMGTYGLLRFCLPLFPNVAQSYAGLFAVIAIIGI 297 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFIL 358 YGA +A Q D K L+AY+S+SH+GFV++ ++ + A QGA+IQM+ HGLS LF+L Sbjct: 298 IYGALVARVQDDAKSLVAYSSISHLGFVVLGLFAFTTEAMQGAMIQMVNHGLSTGALFLL 357 Query: 359 CGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV- 417 G LYER HTR M GGL + + L L + +A+ G+PG FVGEF+IL GSF+ Sbjct: 358 VGMLYERRHTRLMDDYGGLATSVPVLTTLMVISVLASAGLPGLNGFVGEFLILLGSFKST 417 Query: 418 ---VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVL 474 PV+ +T G++ A++Y L M++R +FG+ + A+ ++ ++ RE +++ L+VL Sbjct: 418 VIDSPVLIAFATTGVILAAMYLLHMVYRTFFGEL-TDAANAQMADLNAREFGLMVPLIVL 476 Query: 475 LVLLGFYPQPILDTSHSAIGNIQQWFVNS 503 + +LGFYP P L + + + Sbjct: 477 MFVLGFYPGPFLRQTAPTTEFLLETVEEK 505 >UniRef50_C4XGW9 NADH-quinone oxidoreductase chain M n=3 Tax=Desulfovibrionales RepID=C4XGW9_DESMR Length = 523 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 188/502 (37%), Positives = 270/502 (53%), Gaps = 22/502 (4%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 ++ LI++P + R W +T TLA+ + L L P Sbjct: 8 VVTALIVVPLVAAVALLFMRR------DWTVRMT---TLAVGILECLLSLPLLGYVPDGP 58 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 +Q W+P G++ HL +DGLSL M++LT L+ L VL SW I K FH+ L+ Sbjct: 59 AFQFVEKADWLPALGMTYHLGVDGLSLYMILLTALMLPLCVLGSWTYIAKRVTEFHVCLL 118 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + IGVF A+D LF+ FWE MLVPMY LIA+WG G R A+ KFF+YT A Sbjct: 119 LMTASCIGVFAALDFVLFYVFWEAMLVPMYLLIAVWG-----GPRRRYASIKFFLYTLAG 173 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 ++L AI+A V TF+ EL+ + ++ L +AFA+K+P+ P H Sbjct: 174 STLLLAAIVAFRQVG------GTFSIPELMEKSYAFKFQFWAFLAMALAFAIKVPMFPFH 227 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLP AH +AP AGSV LA ILLK YG LRF LPL P A+ FAP+ + + + GI YG Sbjct: 228 TWLPAAHVEAPAAGSVLLAAILLKMGTYGFLRFCLPLTPAAAETFAPLLIAVSIAGIIYG 287 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 +A QTDIK+LIAY+SV HMGFV + I+ S GA++QM+ HG++ GLF++ G Sbjct: 288 GCIALGQTDIKKLIAYSSVGHMGFVTLGIFLFSVKGVSGAILQMLNHGITTGGLFMMIGL 347 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 LYER H+R++ GL M L F++++L PGT +F+GE ++L G+FQ P + Sbjct: 348 LYERSHSREIADNQGLGKFMPAFMFLFGVFSLSSLAFPGTNSFIGEVLVLIGAFQGNPWV 407 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 + G + A+ Y L +L R +G+ + S + LRE + L +L+ +G Sbjct: 408 GFAAVPGAMLAAAYMLRLLQRVTWGEPAAYKPSWG--DLGLREWVTLAPLGILVFYIGLA 465 Query: 482 PQPILDTSHSAIGNIQQWFVNS 503 P + T +I + Sbjct: 466 PALCIKTIEPSITRVLSAMEAK 487 >UniRef50_D2L5S8 Proton-translocating NADH-quinone oxidoreductase, chain M n=2 Tax=Bacteria RepID=D2L5S8_9DELT Length = 526 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 192/489 (39%), Positives = 261/489 (53%), Gaps = 20/489 (4%) Query: 6 LILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQS 65 LI++P I + R T +TLA + L L+ S P +Q Sbjct: 13 LIVLPLIAALVLLVWRRDEW--------TTRVVTLATGILECLLALPLLSYSPSGPAFQF 64 Query: 66 EFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILG 125 W+P G++ HL +DGLSL MV+LT L+ L VL SW I K FH L+ + Sbjct: 65 VEKAQWLPAMGMTYHLGLDGLSLYMVLLTALMLPLCVLGSWTYISKRVTEFHFCLLLMTS 124 Query: 126 GVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVM 185 IGVF A+D LF+ FWE MLVPMY LIA+WG G R A+ KFF+YT A ++ Sbjct: 125 ACIGVFAALDFVLFYVFWEAMLVPMYLLIAVWG-----GPRRRYASIKFFLYTLAGSTLL 179 Query: 186 LIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLP 245 L AI+A V TF+ EL+ S + L +AFA+K+P+ P H WLP Sbjct: 180 LAAIVAFRQVG------GTFSIPELMEKSYSFKFQIWAFLAMALAFAIKVPMFPFHTWLP 233 Query: 246 DAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMA 305 AH +AP AGSV LA ILLK YG LRF LPL P AS API + + V I YG +A Sbjct: 234 AAHVEAPAAGSVLLAAILLKMGTYGFLRFCLPLTPAASVTAAPIMIAISVASILYGGCIA 293 Query: 306 FAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYER 365 QTDIK+LIAY+SV HMGFV + I+ S GA++QM+ HG++ GLF++ G LYER Sbjct: 294 LGQTDIKKLIAYSSVGHMGFVTLGIFLLSVKGVSGAILQMLNHGITTGGLFMMVGLLYER 353 Query: 366 IHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVIS 425 H+R++ GL M L F+ ++L PGT +FVGE ++L G+F P I + Sbjct: 354 SHSREIVDNQGLGKFMPAFMFLFGLFSFSSLAFPGTNSFVGEILVLIGAFAGNPWIGFAA 413 Query: 426 TFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPI 485 G + A+ Y L +L R +G+ S + +RE + L +L+ +G P Sbjct: 414 VPGAMLAAAYMLRLLQRVTWGEPSS-FKKGSWRDLGVREWLTLAPLALLVFYIGLAPALA 472 Query: 486 LDTSHSAIG 494 + T +I Sbjct: 473 ITTIEPSIE 481 >UniRef50_C6BS86 Proton-translocating NADH-quinone oxidoreductase, chain M n=8 Tax=Bacteria RepID=C6BS86_DESAD Length = 511 Score = 393 bits (1011), Expect = e-108, Method: Composition-based stats. Identities = 178/497 (35%), Positives = 271/497 (54%), Gaps = 22/497 (4%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L L+ P + + + G R L + LALS L+ Sbjct: 8 VLTVLVFFPLLAAVGLFFLK--GDNTIRMYTLGVSIIELALSFPLFAGFKL------ESA 59 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 +Q M W+ ++G+ +L DG+S LMVVLT + L VLCSW I+ FH L+ Sbjct: 60 AFQFVERMDWVKQWGVEYYLGTDGISFLMVVLTIAVLPLCVLCSWTYIQTRVKEFHFCLL 119 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 ++ +GVF A+D+ LF+ FWE ML+PMY LIA+WG G + A+ KFF+YT A Sbjct: 120 FMTAACVGVFTALDLVLFYVFWEAMLIPMYLLIAVWG-----GPEKRYASLKFFLYTLAG 174 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 ++L+AI+A TF EL+ + ++ L +AFA+K+P+ P H Sbjct: 175 SALLLVAIVAFRIAG------GTFAIPELMEQNFAFNFQFWAFLALALAFAIKVPMFPFH 228 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLP AH QAPTAGSV LA +LLK YG LRF+LPL P AS FAP + + + GI YG Sbjct: 229 TWLPAAHVQAPTAGSVILASVLLKMGTYGFLRFNLPLTPAASEYFAPFMIAISIAGILYG 288 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 +A Q DIK++IAY+SV HMGFV + I+ +Q +GA+ QM+ HG++ GLF++ G Sbjct: 289 GIVALGQNDIKKVIAYSSVGHMGFVTLGIFLFNQRGLEGALFQMLNHGITTGGLFMMIGA 348 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 +YER H+R++ GL M FA+++ G PGT +FVGE ++ G+F+ P I Sbjct: 349 VYERSHSRELDDNLGLGKYMPAYMFFWGLFALSSFGFPGTNSFVGEILVFVGAFEQNPWI 408 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 + G + A+ Y L + + +G+ S +E P ++LRE +++ V ++ +G Sbjct: 409 GALMVPGAMVAAAYMLRVSLKLAWGRPTS---WKEWPDLNLREWTYLVIPAVFVLYIGLA 465 Query: 482 PQPILDTSHSAIGNIQQ 498 P +++ +++ Sbjct: 466 PGLCFKVMDASLIKLEK 482 >UniRef50_A6FCN8 NuoM2 NADH-Ubiquinone/plastoquinone (Complex I) oxidoreductase n=2 Tax=Proteobacteria RepID=A6FCN8_9GAMM Length = 500 Score = 390 bits (1003), Expect = e-107, Method: Composition-based stats. Identities = 189/502 (37%), Positives = 280/502 (55%), Gaps = 19/502 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L LI +P I L G K RW + + ++ L + Sbjct: 16 ILSILIFLPAIAALLVPFLS--GNKTVRWFTFTVLFVDFLIATWLLVIFD------NSTA 67 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q Q PW+P GI+ L +DG+S+L + LT LLG + VL SW I K F + L+ Sbjct: 68 QMQFVESKPWVPSLGITYKLGVDGVSVLFLFLTSLLGWICVLASWTAIAKRIKEFMICLL 127 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 I ++GVF A+D+ LF+ FWE MLVPMY +I +WG G+ RI AA KFF+YT A Sbjct: 128 AIQSLMLGVFCALDLLLFYVFWEAMLVPMYLMIGIWG-----GEDRIYAAFKFFLYTLAG 182 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 L+ L+ IL L F G TF+ L++ ++ + + F IAFAVK+P+VP H Sbjct: 183 SLIFLVGILVLYF-----AGGRTFDILTLMDVSYDFELQRGVFIAFLIAFAVKVPMVPFH 237 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLPDAH QAPTAGS+ LAG+LLK AYG +RFSLP+ P+AS FAP+ L + I YG Sbjct: 238 TWLPDAHVQAPTAGSIILAGVLLKMGAYGFIRFSLPMLPDASHYFAPLMQGLSAVAIVYG 297 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 ++A AQ DIK+LIAY+S+SHMGF+ + ++T + GAVIQM HG++ LF+ G Sbjct: 298 GFLALAQQDIKKLIAYSSISHMGFITLGLFTFTINGTTGAVIQMFNHGITTGALFLFIGL 357 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 +YER H+RD+ GGL + + F ++++ +PGT F+GE ++L G+F V Sbjct: 358 VYERTHSRDIPAYGGLLKAVPFYGIFFALFLLSSMAVPGTNGFIGEILVLSGTFGVNNWA 417 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 G + + Y L + + G + A+ ++ ++ REL L L++ + +GFY Sbjct: 418 ATAGVLGALLGAAYLLGIYRQMLLGPIRIPDAA-KMWDLNKRELCCALPLLIFVFWIGFY 476 Query: 482 PQPILDTSHSAIGNIQQWFVNS 503 P+P L + ++ + + + Sbjct: 477 PKPFLSILQPTLKHLLEQTLGA 498 >UniRef50_B8DS13 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DS13_DESVM Length = 519 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 175/461 (37%), Positives = 257/461 (55%), Gaps = 15/461 (3%) Query: 38 LTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLL 97 ++LA SL L G+ L +Q M W+ R+G+ HLA+DG+S+LMV LT Sbjct: 34 VSLAASLVG-LAAGWPLIAFNPDAGFQFVERMTWVARWGLEYHLAVDGISILMVWLTLFT 92 Query: 98 GVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALW 157 L VLCSW I K FH+ L+ + IGVF ++D+ LF+ FWE ML+PMY LIA+W Sbjct: 93 LPLCVLCSWTYIGKRVKEFHICLLLMTSACIGVFTSMDLVLFYVFWEAMLIPMYLLIAVW 152 Query: 158 GHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSS 217 G G R A+ KFF+YT A ++L+AI+A TF+ +L+ Sbjct: 153 G-----GAERRYASIKFFLYTLAGSTLLLVAIVAFRIAG------GTFSIPDLMQQTFGF 201 Query: 218 GVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLP 277 +Y L +AFA+K+P+ P H WLP AH QAP+AGSV LA +LLK YG LRF LP Sbjct: 202 RFQYWAFLAMALAFAIKVPMFPFHTWLPAAHVQAPSAGSVILAAVLLKMGTYGFLRFCLP 261 Query: 278 LFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLA 337 L P AS FAP+ + + V+ I YG +A QTDIK+L+AY+SV+HMGFV + I+ + Sbjct: 262 LTPEASVHFAPLMIGVSVVSILYGGAVALGQTDIKKLVAYSSVAHMGFVTLGIFLFQKSG 321 Query: 338 YQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLG 397 QGA++QM+ HG+ LF++ G +YER H+R++ G+ + +A+A+ G Sbjct: 322 VQGALLQMLNHGIVTGALFMMIGAMYERSHSREVADNMGMGKYLPAFMFFWGLYALASFG 381 Query: 398 MPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQEL 457 PGT FVGE ++ +FQ + + G + A+ Y + R +G + ++ Sbjct: 382 FPGTNGFVGEVLVFVAAFQQSLTVGALIVPGALLAAAYMFRVSLRMAWGSPST---AKTW 438 Query: 458 PGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQ 498 ++ RE +LL VL++ +G P P L +I + Sbjct: 439 NDLNRREWAYLLLPAVLVLWIGLAPAPFLRLIDPSIDRLLA 479 >UniRef50_Q1DDD2 NADH dehydrogenase I, M subunit n=2 Tax=Cystobacterineae RepID=Q1DDD2_MYXXD Length = 577 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 183/534 (34%), Positives = 278/534 (52%), Gaps = 50/534 (9%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL ++ +P + L R + I M L LA + ++ G P Sbjct: 8 LLNLVVFLPLVFAALVALLPAGESGQIRTVTFIAMVLDLAFGVWAYMA------YVPGGP 61 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 ++Q E+ W FG S H+ +DGL++ +++LT LG L VL S I+ FHL L+ Sbjct: 62 EFQLEYRARWFDLFGTSYHIGVDGLAVSLLLLTVFLGPLVVLASTTYIKFRIKEFHLALL 121 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + ++G +++D+ LF+ F+E ML+PMY L+ +WG + R AA KFF+YT A Sbjct: 122 VLQTTMLGALVSLDVLLFYIFFEAMLIPMYLLVGVWG-----AEDRQMAAVKFFLYTLAG 176 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEY-------------------- 221 L+ML+AI+A+ F+ + G +F+Y + N + + + Sbjct: 177 SLLMLVAIIAVYFIS-SPVGARSFDYASIYNGLLDANRQLSACTAGPAGACDSLTGLAAT 235 Query: 222 ------LLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFS 275 L F IAFAVK+P+ PLH WLPDAH QAP AGS+ LAG+ LK +G R++ Sbjct: 236 LHTWGPWLFAAFAIAFAVKVPMWPLHTWLPDAHVQAPVAGSMILAGVTLKMGTFGFWRYA 295 Query: 276 LPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQ 335 +P FP A+ + P L VIGI YGA M AQ DIK+LIAY+SVSH+G+ ++ I + Sbjct: 296 IPFFPVATQQARPFLATLAVIGIVYGALMCLAQRDIKKLIAYSSVSHLGYCMLGILAITA 355 Query: 336 LAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVAT 395 G+ QM+ HG+S LF+L G LYER H+R M GG+ M A + ++ Sbjct: 356 EGATGSAYQMLNHGVSTGALFLLFGYLYERRHSRLMADYGGIAKVMPVFTAAFVIITFSS 415 Query: 396 LGMPGTGNFVGEFMILFGSF-----------QVVPVITVISTFGLVFASVYSLAMLHRAY 444 + +PGT F+GEF++L G+F + V +T G++ + Y L M+ + + Sbjct: 416 IAVPGTNGFIGEFLVLLGTFKSDLGEAAGNPHLTAVFGAFATLGVILGAAYMLWMVQKVF 475 Query: 445 FGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQ 498 FG + +Q L M+LRE +L +VL+ ++G PQP LD + Sbjct: 476 FGGITHR-ENQHLTDMNLREGLTVLPFIVLVAVMGLQPQPFLDRLAPSTDRFLA 528 >UniRef50_B3QY39 Proton-translocating NADH-quinone oxidoreductase, chain M n=14 Tax=Bacteroidetes/Chlorobi group RepID=B3QY39_CHLT3 Length = 545 Score = 386 bits (993), Expect = e-106, Method: Composition-based stats. Identities = 178/544 (32%), Positives = 275/544 (50%), Gaps = 49/544 (9%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLW------LQGGYSLT 55 +L ++ +P I + ++ R+++L LS+ LW + G + + Sbjct: 1 MLSLIVFLPIIAFVIVLAIPGSQKQIIRFVSLAAAIAQGVLSVILWQGYDKTMPGIVAGS 60 Query: 56 QSAGIPQWQSEFDMPWI-------PRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKE 108 +Q + WI I L +DGLS+ MV+LT L+ ++ V+ SW Sbjct: 61 NGNVSETFQFVERLDWITLNFGRFGTLNIEYFLGVDGLSITMVLLTALISIIGVVSSWTI 120 Query: 109 IEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRI 168 ++ +G+F L + + ++G F+A+D FLF+ FWE+ML+PMYFLI +WG G R Sbjct: 121 QKQVKGYFLLYNLLSMA-MMGCFVALDFFLFYVFWEIMLLPMYFLIGIWG-----GPNRE 174 Query: 169 TAATKFFIYTQASGLVMLIAILALVFVHYN-ATGVWTFNYEELLNT----------PMSS 217 AA KFF+YT + ML+ ++ L F + ATG TF+ +++ P S+ Sbjct: 175 YAAIKFFLYTLFGSVFMLLVLIGLYFSVIDPATGNHTFSMVAMVDQANYIPGSIFGPEST 234 Query: 218 GVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLP 277 Y + F+ FA+K+P+ P H WLPDAH +APT SV LAG+LLK YG+LR + P Sbjct: 235 FWRYAAFIALFVGFAIKVPMFPFHTWLPDAHVEAPTPISVILAGVLLKLGTYGMLRINFP 294 Query: 278 LFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLA 337 FP + A + G I I YGA A AQ D+K+++AY+S+SHMG+VL+ + + Sbjct: 295 FFPEVFTDLAYVIGVFGAINIIYGALCALAQLDLKKMVAYSSISHMGYVLLGMAAINTEG 354 Query: 338 YQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLG 397 GA+ QM HG A LF+L G +Y+R H+R + GGL S M + A+LG Sbjct: 355 MSGALFQMFNHGTITAMLFLLVGVIYDRAHSRQIEKFGGLSSYMPVYSGILTMAFFASLG 414 Query: 398 MPGTGNFVGEFMILFGSF--QVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQ 455 +PG F+ E I GSF +V I ++S G+VF + Y L L R + GK + + Sbjct: 415 LPGLSGFISEAFIFVGSFSSEVTRPIAMVSVLGIVFGAAYLLWSLQRMFLGKRRPDALYE 474 Query: 456 -----------------ELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQ 498 + REL M++ L ++++ LG YP P+L +I + Sbjct: 475 LHEDENGHQEIHFHDWTGKNDVDARELSMLIPLGIIVLFLGIYPMPVLGLMTESINKLVD 534 Query: 499 WFVN 502 Sbjct: 535 VLTT 538 >UniRef50_D0L251 Proton-translocating NADH-quinone oxidoreductase, chain M n=41 Tax=Proteobacteria RepID=D0L251_HALNC Length = 507 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 185/518 (35%), Positives = 301/518 (58%), Gaps = 32/518 (6%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L ++ +P I G + RW AL + + LSL L Sbjct: 8 MLSLIVWLPIIAGIFVMWFGAGRARFARWFALASSVVVFLLSLALLPGFDTHTY------ 61 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q + WIP+FGI HL +DG+SL +++LT V+ ++ +W+ I++ + + Sbjct: 62 AMQFVERVAWIPQFGIHYHLGVDGISLPLLILTTFTTVIVIVSAWEVIQEKAHQYLAAFL 121 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + G + G F A+D +F+FF+E ML+PM+ +I +WG G R+ A KFF+YT Sbjct: 122 IMEGMMNGTFAALDAIVFYFFFEGMLIPMFVIIGIWG-----GPRRVYATIKFFLYTFLG 176 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 + MLIA++ + F +F+ + P++ + L+ L FFIAFAVK+P+ P+H Sbjct: 177 SVFMLIALIYMYFKG------GSFSILHMQQLPLTLTEQVLIFLAFFIAFAVKIPMWPVH 230 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLPDAH +APT GSV LA I+LK YG LRFSLP+ P+ASA + + +I I Y Sbjct: 231 TWLPDAHVEAPTGGSVILAAIMLKIGGYGFLRFSLPITPDASALLDSMIIAFSLIAIVYI 290 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIY--------------TGSQLAYQGAVIQMIA 347 ++A Q+D+K+L+AY+S+SHMGFV + ++ +G +LA +GA++QMI+ Sbjct: 291 GFVALVQSDMKKLVAYSSISHMGFVTLGMFVIFMIAANPLNVSGSGVRLALEGAMVQMIS 350 Query: 348 HGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGE 407 HGL +A +F+ G LY+R+H+R++ GG+ + M W A+ + FA+A +G+PGT FVGE Sbjct: 351 HGLISAAMFLSIGVLYDRLHSREISAYGGVVNTMPWFAAMVVVFAMANVGLPGTSGFVGE 410 Query: 408 FMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFM 467 FM++ SF+ I +++ L+ + Y+L M+ R FG +++ + +L ++ RE +M Sbjct: 411 FMVILASFKANFWIALLAALTLIIGASYTLWMVKRVIFGDVQNEGVA-KLKDVNKREAWM 469 Query: 468 ILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNSVT 505 + LVVL++L+G +P P+LD H+ I ++ Q + S Sbjct: 470 LGSLVVLIILVGIWPNPLLDLMHATIEHLAQQALTSKL 507 >UniRef50_Q39ZA6 Proton-translocating NADH-quinone oxidoreductase, chain M n=7 Tax=Geobacter RepID=Q39ZA6_GEOMG Length = 496 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 196/496 (39%), Positives = 289/496 (58%), Gaps = 9/496 (1%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L LI +P G LC R +AL LAL+ L + Sbjct: 6 ILTILIFLPLAG-CLCLAPVWHCRTSARAVALGFAVAELALAAWLLVAATGMPAAPGAPT 64 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 + D WI RFGI L +DG+SLLMV LT + V+A+ SW+ + + + ++ Sbjct: 65 GYFLWEDAVWIERFGIRYLLGMDGISLLMVALTAFITVVAMAVSWRAVTERTALHYFLIL 124 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + G++GVFLA+D+ LF+ FWE+ML+PM+FLI +WGH RI +A KFF+YT A Sbjct: 125 LMESGLMGVFLALDLVLFYLFWEVMLIPMFFLIGIWGHG-----RRIYSAVKFFLYTLAG 179 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 L+ML+AI+ + +H +ATG++TF L P++ L F +AFA+K P+ P+H Sbjct: 180 SLLMLLAIIGVYLIHGDATGIYTFTLPLLAKAPIAHAAAPWLFGAFLLAFAIKFPLFPVH 239 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLPDAH+ APTAGSV LA +LLKT AYGL+RF PLFP A+ F P L V+GI Y Sbjct: 240 TWLPDAHTDAPTAGSVILAALLLKTGAYGLVRFGYPLFPEAAKGFTPFISALAVVGILYA 299 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 +W+A+AQ D+KR++AY+SV HMGFV + I + S +A G+++QM+ HG++ LF L G Sbjct: 300 SWVAYAQEDMKRMVAYSSVGHMGFVALGIASWSPVALSGSILQMVNHGVTTGALFALVGM 359 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 L ER TR++ GG+W K L L FA+ + G+PG NF GEF+IL G F+ P Sbjct: 360 LDERTDTREIAAYGGVWGKAPKLAFFFLLFAMTSAGLPGLNNFTGEFLILAGVFRTTPAA 419 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 I+ G+V +Y++ ++ F + + LP ++LRE ++ +L + V +G + Sbjct: 420 AAIAFIGIVLPLIYTVRLVQEVLFQTERRPL---RLPDVTLREEALLAVLATIDVYIGVH 476 Query: 482 PQPILDTSHSAIGNIQ 497 P+P+LD + + Sbjct: 477 PKPLLDILKVPVALLT 492 >UniRef50_A0B819 F420H2 dehydrogenase subunit M n=2 Tax=Methanosarcinales RepID=A0B819_METTP Length = 502 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 182/506 (35%), Positives = 267/506 (52%), Gaps = 22/506 (4%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 + +I +P +G L + T G R +ALI + LAL+LQ++ + S Sbjct: 6 ISIMIAVPLVGAVLAFLTRSRGQ--ARLVALIASLVPLALALQMYTEFDKSSK------L 57 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMW 122 Q W+P G+ + +D +S +V+LT ++ VL V+ +W E F L+ Sbjct: 58 MQFVESYDWVPSIGVRYTVGVDCISFPLVLLTAIVSVLVVIYAWGE-NHRPNQFFALLLL 116 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 GV+GVF A+D FLF+ FWE++L+PM+FLI +WG G + +A KFFIYT + Sbjct: 117 NEVGVLGVFTALDFFLFYIFWEIVLIPMFFLIGIWG-----GPRKDYSAIKFFIYTHVAS 171 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLN-----TPMSSGVEYLLMLGFFIAFAVKMPV 237 LVML+AI A+ F + G TF+ LL T G+ + G F VKMP Sbjct: 172 LVMLLAIFAMYFTYRLPDGSRTFDMLTLLQATSDKTVFPPGLINAIFAGLLFGFLVKMPA 231 Query: 238 VPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 P H WLPDAH +APTAGSV LA +LLK YG+ R LP+ P+ F + +GV+ Sbjct: 232 FPFHTWLPDAHVEAPTAGSVVLAALLLKMGGYGIFRVILPMLPHVDKAFVTVIAVIGVLS 291 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 I YGA++A AQ DIK+L+AY+S+SHMGFV + + L+ QGA+ Q +HG+ LF+ Sbjct: 292 IIYGAFLALAQKDIKKLVAYSSISHMGFVTLGAVAFTWLSIQGAMFQQFSHGIITCALFM 351 Query: 358 LCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV 417 G + + TR + +GGL +M +L L +A+LG+PG FV EFM+L GS+ Sbjct: 352 SAGTIQHSVGTRIISELGGLADRMPKFASLMLAAFLASLGLPGMSGFVAEFMVLTGSYPT 411 Query: 418 VPVITVISTFGLV-FASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLV 476 PV T++ F V + Y L + FG + +L E+ + +V L + Sbjct: 412 FPVYTMLVVFTSVGVTAGYHLWACQKVLFGPILKKYL--DLHDPHAYEILAMSAIVFLTL 469 Query: 477 LLGFYPQPILDTSHSAIGNIQQWFVN 502 L G P I D +A + + V Sbjct: 470 LFGLQPALITDMMGTAAHQVMEPVVT 495 >UniRef50_Q37617 NADH-ubiquinone oxidoreductase chain 4 n=80 Tax=Eukaryota RepID=NU4M_PROWI Length = 523 Score = 380 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 172/496 (34%), Positives = 274/496 (55%), Gaps = 20/496 (4%) Query: 6 LILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYS---LTQSAGIPQ 62 ++ IP +G + + R IAL + LT +SL LW++ S + G+ Sbjct: 31 VLAIPLLGAIALLFVPSWKTQTIRNIALNSSLLTFLISLLLWIEFDSSSALFQFTDGVCS 90 Query: 63 WQSEFDMPWIPRFG------ISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFF 116 D+ ++ L +DG+SL ++LT LL + +L SW IE Y + Sbjct: 91 PNVYSDVTLAKAASSSSFSALNFALGVDGISLFFIILTTLLVPICILVSWNNIEVYVKEY 150 Query: 117 HLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFI 176 + + + ++ VF +D+ LF+ F+E +L+PM+ +I +WG + + +I AA +FF+ Sbjct: 151 CIAFLVLETLMLTVFSVLDLLLFYIFFESVLIPMFIIIGVWGSR----ERKIRAAYQFFL 206 Query: 177 YTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMP 236 YT ++ML+AIL + F T + E L + S + +L L FF +FAVK+P Sbjct: 207 YTLFGSVLMLLAILLIYFQ------TGTLDIEMLYLSDFSETRQCILWLAFFASFAVKVP 260 Query: 237 VVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVI 296 +VP+H WLP+AH +APTAGSV LAGILLK YG LRFS+PLFP A F P+ + VI Sbjct: 261 MVPVHIWLPEAHVEAPTAGSVILAGILLKLGTYGFLRFSIPLFPYACIYFTPLIYTMSVI 320 Query: 297 GIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLF 356 I Y + Q D+K++IAY+SV+HM FV I +++ + +G+++ MI+HGL + LF Sbjct: 321 AIVYTSCTTIRQIDLKKIIAYSSVAHMNFVTIGLFSQNTQGIEGSILLMISHGLVSPALF 380 Query: 357 ILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ 416 + G LY+R TR +R G M L +FF +A + +PGT +F GEF++ GS+Q Sbjct: 381 LCVGVLYDRHKTRLLRYYSGCGQTMPIFALLFVFFTMANISLPGTSSFPGEFLVFIGSYQ 440 Query: 417 VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLV 476 + + G+V + Y+L + +R +G +K + ++ RE FM L+ ++ Sbjct: 441 NNSFVAFCAATGMVLGAAYALWLCNRLIYGVSKPDFIN-TWSDVNRREFFMFAPLIAGIL 499 Query: 477 LLGFYPQPILDTSHSA 492 +G YP+P LD H + Sbjct: 500 WIGVYPEPFLDAMHCS 515 >UniRef50_C1ZFV0 NADH dehydrogenase subunit M n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZFV0_PLALI Length = 599 Score = 380 bits (976), Expect = e-104, Method: Composition-based stats. Identities = 168/448 (37%), Positives = 255/448 (56%), Gaps = 12/448 (2%) Query: 57 SAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFF 116 S PQ S P + +L +DGL + M++LT L V A+L SW EI + F Sbjct: 109 STSKPQDPSTARSPSGDFINLEFYLGLDGLGMAMILLTTGLCVSAILVSWSEIRERSAEF 168 Query: 117 HLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFI 176 + ++ + G+IGVFLA D+ LF+ F+E L+P++ I +WG G R AA KFFI Sbjct: 169 YAGILILEAGLIGVFLAYDLILFYAFFEFTLLPLFLTIGVWG-----GPKRRYAAGKFFI 223 Query: 177 YTQASGLVMLIAILALVFVHYNATGVWT-FNYEE----LLNTPMSSGVEYLLMLGFFIAF 231 YT A LVML+ +++LV + TG+ T F+ + L + P+ + +L L F Sbjct: 224 YTLAGSLVMLLGLVSLVVETQSLTGISTPFSMPDMARALQDQPLPVETQTILFLLIATGF 283 Query: 232 AVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFA-PIA 290 +K+P+ P H WLP H +APTAGSVDLAG+LLK YG LR ++P+ P+AS P+ Sbjct: 284 LIKVPMFPFHTWLPLVHVEAPTAGSVDLAGVLLKLGCYGFLRIAIPMLPDASLTVGQPLV 343 Query: 291 MWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGL 350 L VIG+ YG+ A+ QTDIKR++AY+S++H+G ++ ++ + G + MI HGL Sbjct: 344 AILAVIGVVYGSLCAYHQTDIKRMVAYSSIAHLGVCMLGLFALNAEGLSGGICMMINHGL 403 Query: 351 SAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMI 410 + LF L G ++ER HTR + +GGL S++ L AL +F + A++G+PG F+GE + Sbjct: 404 ATGALFSLVGMIHERYHTRSLTDLGGLASRIPVLSALLVFISFASIGLPGLNGFIGEILS 463 Query: 411 LFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQ-ELPGMSLRELFMIL 469 L G FQV V VI T G+V ++ Y L M+ FG + + +++RE I Sbjct: 464 LLGMFQVSAVYAVIGTTGVVLSAWYLLRMVQVGLFGPLREPAGDHSHVSDLTVREGLAIW 523 Query: 470 LLVVLLVLLGFYPQPILDTSHSAIGNIQ 497 L + + LG +PQ +L+ + + Sbjct: 524 PLALACLGLGLFPQTLLNLIEPDVKALA 551 >UniRef50_A1KRT7 NADH dehydrogenase chain M n=30 Tax=Proteobacteria RepID=A1KRT7_NEIMF Length = 498 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 171/508 (33%), Positives = 281/508 (55%), Gaps = 23/508 (4%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVK-VPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 LL I IP G L T + + R +A + ++L L+ Sbjct: 6 LLSLAIWIPIAAGVLVLSTGKDSRAPLARVLAFMGALAGFLVTLPLFTGFDRL------S 59 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 +Q WIP I+ L +DG+S+L ++L + +L VL W+ I+K + Sbjct: 60 GGYQFTEFHEWIPLLKINYALGVDGISVLFIILNAFITLLVVLAGWEVIQKRPAQYMAAF 119 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + + G + G F A D LF+ F+E ML+P+Y +I +WG G R+ A+ K F+YT Sbjct: 120 LMMSGLINGAFAAQDAILFYVFFEGMLIPLYLIIGVWG-----GPRRVYASVKLFLYTLM 174 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 L+ML+A +V+++Y +++ + P+ GV+ LL FF++FAVK+P+ P+ Sbjct: 175 GSLLMLVA---MVYLYYQTGSFSIVDFQNIKQIPL--GVQQLLFAAFFLSFAVKVPMFPV 229 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H WLPDAH +APT GS+ LA I LK AYG LRF LP+ P+A+ FAP+ + L +I + Y Sbjct: 230 HTWLPDAHVEAPTGGSMVLAAITLKLGAYGFLRFILPIMPDAARYFAPVIIVLSLIAVIY 289 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTG-----SQLAYQGAVIQMIAHGLSAAGL 355 +A QTD+K+L+AY+S+SHMGFV + ++ + A +GA+IQMI+HG +A + Sbjct: 290 IGMVALVQTDMKKLVAYSSISHMGFVTLGMFLFVNGQLNDWALKGAIIQMISHGFVSAAM 349 Query: 356 FILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSF 415 F+ G +Y+R+HTR++ GG+ + M A + F +A G+P T FVGEFM++ G+ Sbjct: 350 FMCIGVMYDRLHTRNIADYGGVVNVMPKFAAFMMLFGMANAGLPATSGFVGEFMVIMGAV 409 Query: 416 QVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLL 475 +V + ++ L++ + Y+L M R FG + + E+ ++ RE ++ +L V++ Sbjct: 410 KVNFWVGALAAMTLIYGASYTLWMYKRVIFGAIHNPHVA-EMKDINCREFAILAILAVVV 468 Query: 476 VLLGFYPQPILDTSHSAIGNIQQWFVNS 503 + +G YP ++ H A ++ S Sbjct: 469 LGMGLYPNAFIEVVHQAANDLIAHVAQS 496 >UniRef50_C1AB27 NADH-quinone oxidoreductase chain M n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AB27_GEMAT Length = 512 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 190/514 (36%), Positives = 296/514 (57%), Gaps = 24/514 (4%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 MLL W++ +P +G R R + + M + +++ L+ + + Sbjct: 5 MLLNWVLFLPLLGAGALLALPRGNAPAVRMVTVGVMTVQFLMTVALYTHFD------STV 58 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 Q +PWI +G+S + +DGL++L+V+LTG LG L VL +W IE+ FH+ + Sbjct: 59 SGLQFATTVPWIAEWGVSYAIGMDGLNVLLVLLTGFLGPLVVLGAWTAIERDVTMFHVMV 118 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + + ++G FLA D+FLF+ FWE ML+PM+ +I +WG G R A KF +YT Sbjct: 119 LLLQFAMMGAFLAQDLFLFYVFWEAMLIPMFLIIGIWG-----GARRSYATIKFVLYTAF 173 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 ++ML A++ LV NA GV +F + +L+ + V+ L+ F ++FA+K+P+VPL Sbjct: 174 GSILMLAALIYLVQSLQNAGGVASFAFTDLMQAQLPLDVQITLLAAFALSFAIKVPMVPL 233 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H WLPDAH +APT GSV LAG+LLK YG ++ PLFP+A+ F P+ M L V+ I Y Sbjct: 234 HTWLPDAHVEAPTPGSVILAGVLLKMGTYGFIKLGFPLFPDATRVFTPMLMTLSVVSIVY 293 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 GA +A QTDIK++IAY+S+SH+G+V++ + + QGA+IQM++HGL AAGLF+L G Sbjct: 294 GACLALVQTDIKKIIAYSSISHLGYVMLGLLSLDLAGIQGAIIQMVSHGLVAAGLFLLVG 353 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP- 419 +YER HTR++ GGL ++ + F +A++G+P T F GEFM+L G+F Sbjct: 354 MVYERCHTRELSAYGGLARQIPVYAMFFIVFTLASVGLPTTSGFTGEFMVLLGAFNAAWP 413 Query: 420 ----------VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMIL 469 ++ V++ G+V ++Y L FG AK+ A L +SLRE ++ Sbjct: 414 QHLDGNQLPLILAVVAVTGVVLGALYMLRFALTFLFGPAKAPHAP--LNDLSLRERSILA 471 Query: 470 LLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNS 503 +L+V + LG +P L + A Q ++ Sbjct: 472 ILMVSIFALGLFPDGALQKTELAAKAFQSRMTST 505 >UniRef50_D2SHE2 Proton-translocating NADH-quinone oxidoreductase, chain M n=6 Tax=Actinomycetales RepID=D2SHE2_9ACTO Length = 545 Score = 375 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 177/488 (36%), Positives = 269/488 (55%), Gaps = 40/488 (8%) Query: 57 SAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI---EKYQ 113 AG ++Q + WIP FG+ L +DG++L+M++L G+L + VL SW++ + Sbjct: 55 DAGGERFQLTTSVSWIPDFGVDFALGVDGIALVMLLLIGVLVPVVVLASWRDEPTGHRSV 114 Query: 114 GFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATK 173 F L+ + ++GVF A D+FLF+ F+E MLVPMYFLI +G G R AA K Sbjct: 115 KTFFAWLLLLESLMVGVFAATDVFLFYVFFEAMLVPMYFLIGSFG-----GPRRQYAAVK 169 Query: 174 FFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAV 233 FF+Y+ GLVML A++ L V G TF ++ L + GV+ LL LGFF+AFA+ Sbjct: 170 FFLYSLVGGLVMLAAVIGLYVVSAAELGEGTFAFDALRGIEIDPGVQKLLFLGFFVAFAI 229 Query: 234 KMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWL 293 K P+VP H WLPD+ ++AP GSV L G+L K +G LR+ LPLFP+AS + AP + L Sbjct: 230 KAPLVPFHTWLPDSGAEAPIGGSVLLVGVLDKVGTFGFLRYCLPLFPDASRDLAPYVLAL 289 Query: 294 GVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAA 353 V G+ Y A +A Q+D+KRL++YTS++H GF+ + I+ + A G+V+ M+ HG++ Sbjct: 290 AVAGVLYAALLAMGQSDMKRLVSYTSIAHFGFIALGIFAFTTEAATGSVLYMVNHGIATG 349 Query: 354 GLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFG 413 LF++ G L R +R++ GG+ ++ L + L +A+L +PGT +FV EF++L G Sbjct: 350 LLFLVVGMLIARGGSREVGDYGGVAAQAPLLAGVFLVAGLASLALPGTNSFVSEFLVLIG 409 Query: 414 SFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQ------------------ 455 SF PV TV++T G+V A++Y L + R G + + Sbjct: 410 SFPTRPVFTVLATVGIVLAALYVLLLYQRTMHGPPRGVLLEPSPGTPAPATGGGGGATAA 469 Query: 456 --------------ELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFV 501 + +S REL + +V L++ LG YPQP++D A+ Sbjct: 470 TATLEAPAAAPARLRVRDLSRRELAVAAPMVALVIALGVYPQPLIDLIEPAVAATMSDVG 529 Query: 502 NSVTTTRP 509 P Sbjct: 530 ADPAGVSP 537 >UniRef50_C3XEB0 NADH-quinone oxidoreductase subunit M n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XEB0_9HELI Length = 536 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 154/477 (32%), Positives = 257/477 (53%), Gaps = 15/477 (3%) Query: 23 FGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLA 82 F + I + L L + LW+ + + Q + IP GI + Sbjct: 2 FDDSGAKRFGRIISFIELGLVIALWISYRVDIADT------QFFTKIFLIPALGIDYIVF 55 Query: 83 IDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFF 142 +DG+SL +++LT + LA + + F + L+ + ++ +F++ ++ +F+ Sbjct: 56 VDGISLFLIILTAFIIFLANIYLQR--RDDAKPFVVCLLSLEAILMALFVSQNVLMFYTC 113 Query: 143 WEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGV 202 WE+ L+P+ +++ +WG +I KFF+YT AS L+ML+AIL + ++ Y G Sbjct: 114 WELALLPVLYMVGVWGSG-----QKIYIGLKFFVYTFASSLMMLLAILYIGYLCYEQLGY 168 Query: 203 WTFNYEELLNTPM--SSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLA 260 W+F+ L+ + + L LGFF++ AVK+P++PLH WLP +S+AP GSV L+ Sbjct: 169 WSFDLGVWLSGDLKIPLDTQIWLFLGFFVSIAVKIPIIPLHTWLPHIYSEAPALGSVMLS 228 Query: 261 GILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSV 320 +L K Y LLRF LPLFP+AS F PI L VI + Y +AF Q DIK++IAY+S+ Sbjct: 229 ALLSKMGTYALLRFVLPLFPDASVHFMPIVSVLAVIMVVYAGIIAFKQKDIKKVIAYSSI 288 Query: 321 SHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSK 380 SHMG V++ I+ + GA+ M+AHG+++ GLF+L G LY R TR + GG+ Sbjct: 289 SHMGIVVLGIFAFNNEGISGAIFMMVAHGVTSGGLFMLAGMLYYRTMTRHVDDFGGVAHV 348 Query: 381 MKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAML 440 M ++ +G+P T FVGEF+ L+G FQ P++T I+ L+ A+ Y L + Sbjct: 349 MPHYSTFFAIVMLSNVGLPLTIGFVGEFLSLYGYFQTSPIMTAIAGTTLIIAASYMLYLF 408 Query: 441 HRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQ 497 ++G K +Q L + +E ++ + +++ LG +P +L ++ + Sbjct: 409 KNVFYGTLKQTHITQSLKDLGFKEFCVLGPIAFVIIWLGVFPNTLLKPMQVSVQQLV 465 >UniRef50_A9EX60 NADH dehydrogenase (Ubiquinone) n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9EX60_SORC5 Length = 671 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 182/506 (35%), Positives = 287/506 (56%), Gaps = 21/506 (4%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL LI +PF+G R + + R L +G SL L Sbjct: 108 LLNVLIGLPFVGAAAVLFMPRQLLSLLRGFTLAVLGAGFLASLWLLTV--------PMTV 159 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 W + WIP GI H+AIDG+SL +V+LT + +A S+ I+ L+ Sbjct: 160 GWHFQSIKEWIPALGIRWHVAIDGISLWLVLLTTFIAPIAAYASFGSIKNRIKELCFCLL 219 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 ++ G ++G F+A+D+FLFF FWE+MLVPM+ +I +WG G +I AA K F+YT A Sbjct: 220 FLQGAMLGAFVALDLFLFFLFWELMLVPMFVMIGIWG-----GVEKIKAAIKLFVYTMAG 274 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 ++ML I+ LV+ + TG +TF+Y L + G + L F IAF +K+P+ P+H Sbjct: 275 SMLMLAGIVYLVWANQKLTGAYTFDYLALSRVVLPRGAQMLCFWAFSIAFFIKVPMWPVH 334 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG-IFY 300 WLPDAH QAPT GSV LA ++LK Y LRFS+ LFP ++ A + ++G + Y Sbjct: 335 TWLPDAHVQAPTGGSVILAAVMLKIGTYAYLRFSMGLFPGPASSLAANLAGIAILGGVIY 394 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 GA +A+ Q+D+KRL+AY+SV+H+G+V++ ++ + QGAVIQM+ HG+S LF+L G Sbjct: 395 GALVAWKQSDVKRLVAYSSVAHLGYVMLGLFGVTPSGIQGAVIQMVNHGVSTGALFLLVG 454 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ---- 416 +Y+R HTR++ GGL M L L A++G+PGT F+GEFMI+ G++ Sbjct: 455 VIYDRRHTREVSEFGGLAKVMPVYATLFLIVTFASVGVPGTNGFIGEFMIIMGTYASERL 514 Query: 417 --VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVL 474 + T+ + G++ A+VY L+++ + +FG + ++ LP ++ RE + L+++ Sbjct: 515 GTFSGIHTIGAAAGVILAAVYMLSVVQKMFFGPLTNP-KNKHLPDVTPREGLALAPLILM 573 Query: 475 LVLLGFYPQPILDTSHSAIGNIQQWF 500 + ++G +P LD ++ + F Sbjct: 574 IFVIGLFPAIFLDRMKESVLSTYNQF 599 >UniRef50_C3XM21 NADH-ubiquinone oxidoreductase n=4 Tax=Campylobacterales RepID=C3XM21_9HELI Length = 534 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 183/506 (36%), Positives = 286/506 (56%), Gaps = 19/506 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL LI P G L + + A++ + LA +L LW S Sbjct: 4 LLTLLIFFPLFGALLAIGIKEN----LKTYAIVISAIELAFALLLWYGFDKSAD------ 53 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 +Q + + FG+S + +DG+SL +++L+ +G++ + ++L+ Sbjct: 54 GFQFITALSLVEGFGVSYLVGVDGISLFLILLSAFIGLIGFIY--LNENYEAKKLIISLL 111 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + +IGVF A+DM LF+ FWE+ LVPM ++I WG +RI AA KFF+YT Sbjct: 112 CLESIMIGVFCALDMILFYIFWELSLVPMLYIIGAWGSG-----SRIYAAVKFFLYTFLG 166 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLN-TPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 ++ML+ IL L + ++ +G+WTF+ E + + + GV+ L L FF AVK+P+ P Sbjct: 167 SMLMLVGILFLAYYYFEVSGIWTFSLLEWYSLSAIPKGVQLWLFLAFFAGLAVKVPMFPF 226 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H WLP AH QAPT GS+ LA +LLK YG +RFSLPLFP+AS F L +I I Y Sbjct: 227 HTWLPYAHGQAPTIGSIILAAVLLKMGTYGFVRFSLPLFPDASIFFLMPVAILSLIMIIY 286 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 GA++AFAQ DIK++IAY+S+SHMG +++ I+ + G+V M++HG+ + LF+L G Sbjct: 287 GAFVAFAQEDIKQVIAYSSISHMGVIMVGIFALNVEGITGSVFFMLSHGIISGALFMLVG 346 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 LYER HT+ + GG+ M A+ A+A+ G+P T FVGEF+ L G FQV P+ Sbjct: 347 MLYERRHTKMIAEFGGIAKVMPNYAAIFGIMAMASAGLPLTMGFVGEFLSLLGFFQVSPI 406 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 + I+ ++ +VY L + + +FGK + + + +L ++ RE +L LV +++ LG Sbjct: 407 MAGIAGISIIVGAVYMLHLYRKTFFGKVVN-VQNLKLSDLNAREWSALLPLVAIVIWLGV 465 Query: 481 YPQPILDTSHSAIGNIQQWFVNSVTT 506 YP+PIL+ + + N + + T Sbjct: 466 YPKPILEPINKGVENTLAIMQSRIVT 491 >UniRef50_Q0RRV6 NADH-quinone oxidoreductase chain M (NADH dehydrogenase I, chain M) (NDH-1, chain M) n=13 Tax=Actinomycetales RepID=Q0RRV6_FRAAA Length = 610 Score = 373 bits (959), Expect = e-102, Method: Composition-based stats. Identities = 156/389 (40%), Positives = 237/389 (60%), Gaps = 2/389 (0%) Query: 107 KEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKT 166 + + F L+ + G+IGVF A D+FLF+ F+E ML+PMYFLI +G + Sbjct: 185 RHGRRSVPAFFALLLALEAGMIGVFAATDVFLFYVFFEAMLIPMYFLIGSYG-PVKEQAQ 243 Query: 167 RITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLG 226 R AA KF +Y+ GL+ML A++ L V + G TF++ L ++ GV+ LL LG Sbjct: 244 RSYAAVKFLVYSLFGGLLMLAAVIGLYVVSADNLGHGTFDFATLRQMEITPGVQKLLFLG 303 Query: 227 FFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEF 286 FF+AFA+K P+ P H WLPDA +Q+PT G+V L G+L K +GL+R+ +PLFP+A+ F Sbjct: 304 FFVAFAIKAPLFPFHTWLPDAGAQSPTGGAVLLVGVLDKVGTFGLIRYCIPLFPDAADYF 363 Query: 287 APIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMI 346 AP+ + L V+GIFYGA +A Q D+KRL+AYTS++H GF+ + ++ + A GAV+ M+ Sbjct: 364 APLVLGLAVVGIFYGALLAIGQRDMKRLVAYTSLAHFGFIALGLFAFTSQAGTGAVLYMV 423 Query: 347 AHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVG 406 HGLS LF++ G L R +RD+ GGL L + L +++L +PGT +FV Sbjct: 424 NHGLSTGLLFLVVGFLVTRRGSRDVGAYGGLAKVTPVLAGVFLLAGLSSLALPGTNSFVS 483 Query: 407 EFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELF 466 EF++L G+F + +++T G+V A++Y L + R G + ++ L + LRE Sbjct: 484 EFLVLVGTFTANKPLAIVATCGIVLAAIYVLYLYQRTMTGPVVHE-ENRVLHDLGLREKV 542 Query: 467 MILLLVVLLVLLGFYPQPILDTSHSAIGN 495 ++ LV L+V LG YP+P+LD + Sbjct: 543 VVAPLVALIVALGVYPKPLLDIIRPTVTA 571 >UniRef50_D1CCC3 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCC3_THET1 Length = 511 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 176/503 (34%), Positives = 282/503 (56%), Gaps = 18/503 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L +L+P L RWIA+I G+ L L+ + G Sbjct: 12 ILTLTLLVPLASAILAALVPGDRKNTIRWIAVIGSGVNLMLAAIALASFRF------GTD 65 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q Q W P + +L IDG+S+L+ LT LL +A++ S+ I+ +++ L+ Sbjct: 66 QIQLVERWIWAPSLNLQYYLGIDGISVLLYGLTALLSFIAIVYSFGVIDYRIKEYYVALL 125 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + G++GVF+A+D+ LF+ F+E+ L+PM LI +WGH ++ +A KFF+YT A Sbjct: 126 VLETGMLGVFVALDLLLFYVFFELTLIPMALLIGVWGHG-----RKLYSAVKFFLYTLAG 180 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTP--MSSGVEYLLMLGFFIAFAVKMPVVP 239 L+ML AI ++ + T NY +LL S + + GFF AFA+K+P+ P Sbjct: 181 SLIMLAAIASIYVHTSSIPNGPTLNYVDLLRIAPNWSYAWQVWMFWGFFFAFAIKVPLFP 240 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 H WLPDAH APTAGS+ LAG+LLK YG LR+ LPL P AS + A I + L VI I Sbjct: 241 FHTWLPDAHVDAPTAGSILLAGVLLKMGGYGFLRWLLPLAPEASRDLAVIPITLSVIAIL 300 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 YGA + Q D+K+L+AY+SV+ MGFV++ I+ + QGA++QM++HG + LF+ Sbjct: 301 YGALVTLVQRDLKKLVAYSSVASMGFVVLGIFIFNLHGAQGAIVQMVSHGFISGALFLGV 360 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP 419 G +YER+HTR++ +GGL + M +L + ++A LG+PG FVGE ++ G++ P Sbjct: 361 GVIYERLHTREIAKLGGLATLMGPFASLWVMLSLANLGLPGFSAFVGEVLVTLGTWLYKP 420 Query: 420 VITVISTFGLVFASVYSLAMLHRAYF-GKAKSQIASQELPGMSL-RELFMILLLVVLLVL 477 + ++ ++ Y L M+ R ++ GK +S+++ LP M++ +E +++LV + Sbjct: 421 WLAFPVYAYIILSAAYMLWMVARVFYLGKPESKVS---LPPMNIYQEALPLVVLVGFSFV 477 Query: 478 LGFYPQPILDTSHSAIGNIQQWF 500 LG + P L + ++ + Sbjct: 478 LGVWATPFLRATEPSLVTLLGHL 500 >UniRef50_Q30PJ1 Proton-translocating NADH-quinone oxidoreductase, chain M n=8 Tax=Epsilonproteobacteria RepID=Q30PJ1_SULDN Length = 517 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 170/505 (33%), Positives = 278/505 (55%), Gaps = 17/505 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L LI P + G L + R + + L++ LW +L+ Sbjct: 5 ILSILIFFPALAGILGFVV---NKNSIRSYGVAVATIEFGLAMWLWFAFDSTLS------ 55 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q + +P FGI+ + +DG+SL +++L + + S E++ + + L+ Sbjct: 56 GMQFMEQIALVPAFGINYIVGVDGISLFIIILAAF-FTMIGIASLGEMKDIKNL-IITLL 113 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 ++ ++GVF+A+D +F+ FWE+ LVPM ++I WG G RI A+ KFF+YT A Sbjct: 114 FLQMTMVGVFVALDAIVFYLFWELSLVPMLYIIGAWG-----GPLRIYASVKFFLYTFAG 168 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 LVML+ +L + + +Y ATG W+F + + + L + FF FA+K+P+ P H Sbjct: 169 SLVMLVGMLFMAYFYYQATGEWSFALLDWYRLILPESFQNWLFIAFFFGFAIKVPMFPFH 228 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLP AH QAPT GSV LA ILLK Y +RFSLPLFP+AS F L +I I Y Sbjct: 229 TWLPYAHGQAPTIGSVILAAILLKMGTYAFIRFSLPLFPDASVYFMYPIAVLAIIMIIYT 288 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 A +A+AQ DIK+++AY+SVSHMG +++ + + G++ MIAHG+ + LF L G Sbjct: 289 AMVAYAQKDIKQVVAYSSVSHMGVIILGTFALNVEGITGSIFLMIAHGVVSGALFFLVGV 348 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 +Y+R HT+ M GGL S M + +A++G+P T NFVGEF+ L G ++ ++ Sbjct: 349 IYDRRHTKLMSEFGGLASVMPRYATIFGIMLMASVGLPLTINFVGEFLSLLGFYKQSHIL 408 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 T+++ ++ ++Y L+ + +FG + ++ LP ++ REL ++ L ++ + LG Y Sbjct: 409 TLLAGTAIIVGAIYMLSAYKKMFFGVVTHE-ENRNLPDINKRELLALIPLTIITIWLGIY 467 Query: 482 PQPILDTSHSAIGNIQQWFVNSVTT 506 P+PIL+ + ++ + T Sbjct: 468 PKPILEPINKSVEGVVTLMHEKSLT 492 >UniRef50_Q7V4E4 NAD(P)H-quinone oxidoreductase chain 4 n=43 Tax=cellular organisms RepID=NU4C_PROMM Length = 563 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 193/505 (38%), Positives = 277/505 (54%), Gaps = 23/505 (4%) Query: 3 LPWLILIPFIGGFLCWQTERFGV-KVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 L IL P +G FL G K RW AL +T +++ +L G + Sbjct: 28 LSLSILFPIVGAFLVPFIPDEGEGKQVRWFALGIALVTFLITVAAYLYG-----YDPSLS 82 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q + W+P G++ + DG+S+ +++LT + LAVL +W K + F ++ Sbjct: 83 GLQLSERVSWLPDLGLTWAVGADGISMPLILLTSFITALAVLAAWPVTFKPK-LFFFLIL 141 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + GG I VF DM LFF WE+ L+P+Y L+A+WG GK R AATKF IYT S Sbjct: 142 AMDGGQIAVFAVQDMLLFFLAWELELLPVYLLLAIWG-----GKKRQYAATKFIIYTAGS 196 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 L +L+ LA+ F G F Y L +G + L G IAF VK+P+VPLH Sbjct: 197 SLFILLVALAMGFF---GGGTPNFEYTNLAQQSFGTGFQLLCYAGLLIAFGVKLPIVPLH 253 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLPDAH +A + LAGILLK Y L+RF+ L P A A+FAP+ + LGV+ I Y Sbjct: 254 TWLPDAHGEATAPVHMLLAGILLKMGGYALMRFNAQLLPEAHAQFAPLLIVLGVVNIIYA 313 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 A +FAQ ++KR IAY+S+SHMGFVLI I + S L GA++QMI+HGL A LF L G Sbjct: 314 ALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFSALGTSGAMLQMISHGLIGASLFFLVGA 373 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFG-------S 414 Y+R HT + MGG+ KM+ + AL A+A+L +PG FV E M+ G + Sbjct: 374 TYDRTHTLQLEEMGGVGQKMRIMFALWTVCALASLALPGMSGFVSELMVFVGFATDEAYT 433 Query: 415 FQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQ-ELPGMSLRELFMILLLVV 473 VI ++ G++ +Y L+ML +FGK Q+ S L RE+++I L+V Sbjct: 434 LTFRIVIAGLAAIGVILTPIYLLSMLREIFFGKENDQLVSHTNLVDAEPREVYIISCLLV 493 Query: 474 LLVLLGFYPQPILDTSHSAIGNIQQ 498 ++ +G YP+ + D+ ++I + + Sbjct: 494 PIIGIGLYPRLMTDSYTASIQELVK 518 >UniRef50_Q1RKE5 NADH-quinone oxidoreductase subunit M n=17 Tax=Rickettsieae RepID=NUOM_RICBR Length = 494 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 165/500 (33%), Positives = 279/500 (55%), Gaps = 21/500 (4%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWI-----ALITMGLTLALSLQLWLQGGYSLTQ 56 ++ I +P I K + I A+++ LT ++ + ++ Sbjct: 6 IISITIFLPLISVLYILLFISQSKKPDKQIHTMYVAVLSSVLTFISTIYILIEFD----- 60 Query: 57 SAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFF 116 + P +Q W+ + G+ H+ IDG+S+ V LT L ++ ++ S ++KY + Sbjct: 61 -SSNPTYQFVERYSWLDKIGLEFHVGIDGISIFFVSLTSFLTLICIIGSLFTVKKYIKEY 119 Query: 117 HLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFI 176 + + + IG F +I++ +F+ F+E++LVPMY +I +WG G+ RI AA KFF+ Sbjct: 120 LVCFLLMESFCIGAFTSINLLVFYLFFEVILVPMYIIIGVWG-----GENRIYAAVKFFL 174 Query: 177 YTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMP 236 YT + L++I+ + Y+ + + V+ +L FIAFA+K+P Sbjct: 175 YTFFGSVFFLLSIIYI----YSKIHSFDLSNIGEFTNNFPLHVQQILWWAIFIAFAIKIP 230 Query: 237 VVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVI 296 ++P H WLPDAH QAPT+GSV LAGILLK YG LR LPL PNAS EFA +WL VI Sbjct: 231 MIPFHTWLPDAHVQAPTSGSVILAGILLKLGGYGFLRVLLPLLPNASQEFAIYVIWLSVI 290 Query: 297 GIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLF 356 I Y + +A AQ D+K++IAY+S++HMG+V I I++ + GA+ QM++HG+ ++ LF Sbjct: 291 AIIYASLVALAQKDMKKMIAYSSITHMGYVTIGIFSFTDSGVSGALFQMLSHGIISSCLF 350 Query: 357 ILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ 416 ++ G LYER+HT+++ GG+ SKM L + + ++G+PGT F+GEF+ L G ++ Sbjct: 351 LIVGTLYERLHTKEIAKYGGVASKMPVLATFFMIAMLGSVGLPGTSGFIGEFLSLLGIYK 410 Query: 417 VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLV 476 V + T ++ G++ ++Y L + G+ ++ + + E+ I L++L++ Sbjct: 411 VNVIATFLAALGIILGAIYMLKLYKEVMLGEITNKEIIN-FRDLYIYEIISIAPLILLII 469 Query: 477 LLGFYPQPILDTSHSAIGNI 496 G P IL+ H ++ N+ Sbjct: 470 YFGLMPSSILNVFHLSVENL 489 >UniRef50_C1DT37 NADH-quinone oxidoreductase subunit m (Nadhdehydrogenase i subunit m) (Ndh-1 subunit m) n=10 Tax=Aquificales RepID=C1DT37_SULAA Length = 502 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 175/452 (38%), Positives = 258/452 (57%), Gaps = 10/452 (2%) Query: 54 LTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQ 113 LT + Q WIP+FGI+ + +D LSL MV LT + V+A + S IEK Sbjct: 55 LTYDPSGYKIQFYEKYSWIPQFGINYEVGVDALSLTMVWLTAISFVVAFIWS-TNIEKRI 113 Query: 114 GFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATK 173 + + + + IGVF+A D+ F+ FWE+ML+PM+ +I +WG+ RI AATK Sbjct: 114 KEYFVAFLVLEAACIGVFVAWDLVAFYVFWEVMLIPMFLIIGVWGY-----AERIYAATK 168 Query: 174 FFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAV 233 FFIYT L +LI ++ + +Y V + +Y +LL + +E + L + FA+ Sbjct: 169 FFIYTFFGSLFLLIGVIGMYIYNYMENNVLSMSYFDLLKLSLPHNLEIIFFLLLALGFAI 228 Query: 234 KMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWL 293 K+P+ P H WLP AH QAPTAGSV LA +LLK YG +RF+LP FP AS F P+ L Sbjct: 229 KVPMWPFHTWLPAAHVQAPTAGSVILAAVLLKMGTYGFVRFNLPWFPEASKYFVPVMFAL 288 Query: 294 GVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAA 353 GVI I Y A MA AQT IKRLIAY+SVSHMGFV I + + GA+I MI+HGL++ Sbjct: 289 GVIAIIYTAMMAIAQTHIKRLIAYSSVSHMGFVTIGTFALNTEGVNGAIITMISHGLTSG 348 Query: 354 GLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFG 413 LF+ G +YER+H+ +M+ +GG+ + L + A+A+ G+PG FVGEF+ L G Sbjct: 349 ALFLAAGFIYERLHSYEMKDLGGMAKFVPVFATLFMISAMASAGLPGLSGFVGEFLALLG 408 Query: 414 SFQVVPVITVISTFGLVFASVYSLAMLHRAYF----GKAKSQIASQELPGMSLRELFMIL 469 +F+V + ++ LV + Y+L + R F + + L ++ EL+ L Sbjct: 409 TFKVSILTAALAGLSLVVGAAYTLWLYKRTMFEEELLTEEKKKEYSHLKDLNTAELWSFL 468 Query: 470 LLVVLLVLLGFYPQPILDTSHSAIGNIQQWFV 501 LV+ + ++G YP+ +D ++ + V Sbjct: 469 PLVIFMFVIGIYPKWWIDLINNTTTFVLHKIV 500 >UniRef50_O53307 NADH-quinone oxidoreductase subunit M n=26 Tax=Actinomycetales RepID=NUOM_MYCTU Length = 553 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 161/528 (30%), Positives = 259/528 (49%), Gaps = 48/528 (9%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L L L+P G L ++ +W ++ LTLA+S+ + + Sbjct: 7 LSVLWLVPLAGAVLIILLPPGRRRLAKWAGMVVSVLTLAVSIVVAAEF------KPSAEP 60 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWK--------------- 107 +Q WIP FG L +DG+++++V+LT +L L ++ W Sbjct: 61 YQFVEKHSWIPAFGAGYTLGVDGIAVVLVLLTTVLIPLLLVAGWNDATDADDLSPASGRY 120 Query: 108 --------------EIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFL 153 E + + + I V+ +A+D+ LF+ F+E ML+PMYFL Sbjct: 121 PQRPAPPRLRSSGGERTRGVHAYVALTLAIESMVLMSVIALDVLLFYVFFEAMLIPMYFL 180 Query: 154 IALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLN- 212 I +G G R AA KF +Y GL+ML A++ L V TF++ E++ Sbjct: 181 IGGFG----QGAGRSRAAVKFLLYNLFGGLIMLAAVIGLYVVTAQY-DSGTFDFREIVAG 235 Query: 213 -----TPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTA 267 V L LGF AFA+K P+ P H WLPDA ++ A +V + ++ K Sbjct: 236 VAAGRYGADPAVFKALFLGFMFAFAIKAPLWPFHRWLPDAAVESTPATAVLMMAVMDKVG 295 Query: 268 AYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVL 327 +G+LR+ L LFP+ S F P+ + L +IG+ YGA +A QTD+ RLIAYTS+SH GF++ Sbjct: 296 TFGMLRYCLQLFPDPSTYFRPLIVTLAIIGVIYGAIVAIGQTDMMRLIAYTSISHFGFII 355 Query: 328 IAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPAL 387 I+ + G+ + M+ HGLS A +F++ G L R +R + GG+ L Sbjct: 356 AGIFVMTTQGQSGSTLYMLNHGLSTAAVFLIAGFLIARRGSRSIADYGGVQKVAPILAGT 415 Query: 388 SLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGK 447 + A+AT+ +PG F+ EF++L G+F + LV ++VY L + R G Sbjct: 416 FMVSAMATVSLPGLAPFISEFLVLLGTFSRYWLAAAFGVTALVLSAVYMLWLYQRVMTGP 475 Query: 448 AKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGN 495 ++ + + RE+ ++ L+ LL++LG YP+P+LD + A+ N Sbjct: 476 VAEG--NERIGDLVGREMIVVAPLIALLLVLGVYPKPVLDIINPAVEN 521 >UniRef50_Q7NHJ9 NADH dehydrogenase subunit 4 n=1 Tax=Gloeobacter violaceus RepID=Q7NHJ9_GLOVI Length = 498 Score = 367 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 199/515 (38%), Positives = 299/515 (58%), Gaps = 24/515 (4%) Query: 1 MLLPWLILIPFI----GGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQ 56 M +PWL LI F L + R AL GLT LS + Y+ T Sbjct: 1 MSVPWLSLILFFPTLGALGLALLPGEVSYRFARVWALTVAGLTFLLSGLVAYNFDYTST- 59 Query: 57 SAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFF 116 + Q + W+P+ GIS ++A+DGLSL +V+LTGLL VL++L SW E+ K + Sbjct: 60 -----KPQFAETINWLPQLGISYNIAVDGLSLPLVLLTGLLVVLSILTSW-ELNKRARLY 113 Query: 117 HLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFI 176 ++ ++ + GV+G F+A D LFF +EM L+P+YFLI++WG GK R A TKF + Sbjct: 114 YVLILLLSTGVLGAFMARDTILFFLAYEMELIPLYFLISIWG-----GKRREYAGTKFLL 168 Query: 177 YTQASGLVMLIAILALVFVHYNATGVWTFNYEELLN--TPMSSGVEYLLMLGFFIAFAVK 234 YT SG+ +L+A L+ F +GV +F+ + L N TP +++ + + FA+K Sbjct: 169 YTFLSGVALLVAFLSTYFF----SGVNSFSIDVLANPATPYPLAFQFITLGLITLGFAIK 224 Query: 235 MPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLG 294 MP+VPLH WLPDAH +APTA SV LAG+LLK YG++RF L +FP A+ +FA + L Sbjct: 225 MPLVPLHTWLPDAHVEAPTAVSVLLAGVLLKLGTYGIVRFGLGIFPEAAVQFAWLLSVLA 284 Query: 295 VIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAG 354 I + Y + A AQTDIK++IAY+S++HMG+V++ I + ++ GA+ QMI+HG+ + Sbjct: 285 AINVVYASLAAMAQTDIKKMIAYSSIAHMGYVVLGIASLNETGLGGAMFQMISHGIISGL 344 Query: 355 LFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGS 414 LF+L G +YE+ TR++ +GGL++ M + A + A+A G+PG FV EFM+ G Sbjct: 345 LFMLVGLIYEKSGTRELPKLGGLFATMPVVGAFFVGAAMANAGLPGMSGFVAEFMVFCGG 404 Query: 415 FQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVL 474 + PV TV+ FG+V ++Y LAML RA+FGK + + + +P + EL +L+V+ Sbjct: 405 IERYPVATVLCIFGIVLTAIYMLAMLARAFFGKLPANLET--MPRVKAWELIPATVLLVI 462 Query: 475 LVLLGFYPQPILDTSHSAIGNIQQWFVNSVTTTRP 509 V LG +P + + Q P Sbjct: 463 CVGLGLFPTLATGIFEPNVAQLVQQLDAKTVAQIP 497 >UniRef50_A7NEJ8 NADH-quinone oxidoreductase, subunit M n=19 Tax=Francisella RepID=A7NEJ8_FRATF Length = 529 Score = 365 bits (939), Expect = 2e-99, Method: Composition-based stats. Identities = 196/531 (36%), Positives = 282/531 (53%), Gaps = 47/531 (8%) Query: 2 LLPWLILIPFIGGFLCWQTE--RFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAG 59 LL +I +P +GGF+ T V RW+AL+ LTLAL + L YS + Sbjct: 7 LLSLIIWLPIVGGFVVLATRTKELHGDVARWVALVFSCLTLALCIPLVTSFDYSSS---- 62 Query: 60 IPQWQSEFDMPWIPRFG---ISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFF 116 Q + + W FG I L +DG S+L +VLT ++ VL +W I+ + Sbjct: 63 --AMQFQESVKWFKVFGMHDIYYSLGVDGFSVLFIVLTSFATLVIVLAAWISIKTKVRQY 120 Query: 117 HLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFI 176 + G GVF A D L++ FWE +L+P I +WG GK + AA K+F+ Sbjct: 121 MAIFLITCGLTNGVFCATDSILYYVFWEALLIPTCLGIGIWG-----GKHKAYAAVKYFM 175 Query: 177 YTQASGLVMLIAILAL----------------VFVHYNATGVWTFNYEELLNTPMSSGVE 220 YT + +L AIL + + N T + + + + + Sbjct: 176 YTFFGSVFLLAAILYIQTRVAASPTHFLVNQDTYSIQNFIAWATQSQGFIDSVKFTLTAQ 235 Query: 221 YLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFP 280 +L+ FF+AFAVK+P+ P H WLPDAHS+AP GSV LA ++LK AYG LRF++P+ P Sbjct: 236 WLVFGAFFLAFAVKIPMWPFHSWLPDAHSEAPAGGSVILAALMLKLGAYGFLRFAIPMLP 295 Query: 281 NASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYT-------- 332 +A + + + +I I Y +A AQTD+KRLIAY+S+SHMG V + +++ Sbjct: 296 EVTASLEYVLIIMSLIAIVYVGVVAVAQTDVKRLIAYSSISHMGLVTLGLFSIFILKNAD 355 Query: 333 ------GSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPA 386 +QLA QGAV QMIAH S+ G+FI G LY R+HTR++ G+ M Sbjct: 356 PVLGTTHAQLALQGAVFQMIAHAFSSGGMFIGIGYLYLRMHTREISDFSGVAKTMPIFAT 415 Query: 387 LSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFG 446 L F +A +G+PGT FVGEFMIL FQ P+I +I+ LV A +Y+L M R +FG Sbjct: 416 FFLLFCMANVGLPGTSGFVGEFMILLAVFQYSPLIALIAGLTLVIAPIYTLWMYKRVFFG 475 Query: 447 KAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQ 497 + S L ++ ELF+ +LL V ++L GFYP+PIL S +A +I Sbjct: 476 EVVS-TQVASLTDLNRMELFVFILLAVPILLFGFYPEPILQLSAAASAHIV 525 >UniRef50_C8XBD3 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XBD3_NAKMY Length = 588 Score = 364 bits (936), Expect = 4e-99, Method: Composition-based stats. Identities = 160/454 (35%), Positives = 253/454 (55%), Gaps = 12/454 (2%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L LI +P +G + K + IAL+ LA+ + LW+ + T +A Sbjct: 6 LVVLIFLPVVGALVLAAMSGAPEKTVKLIALVFSLAELAVVVALWMSYRAATTDAASQLD 65 Query: 63 --WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI---EKYQGFFH 117 ++ F + WIP FGI+ L +DG+SL M+ L +L + + SW+E + G + Sbjct: 66 VPFRETFSVTWIPYFGINFSLGVDGISLTMIALIAVLMPIVLGASWEEKLPAGRTIGGYF 125 Query: 118 LNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIY 177 L+ + G ++GVF A ++F+F+ +E+ML+PMYFL+ +G G R AATKFF+Y Sbjct: 126 ALLLVLQGAMVGVFAATNVFVFYVMFEVMLIPMYFLVGAFG-----GVRRAYAATKFFLY 180 Query: 178 TQASGLVMLIAILALVFVHYNATGVWTFNYEEL--LNTPMSSGVEYLLMLGFFIAFAVKM 235 + GL+ML +++ L G TF++ L + + + + GF IAFA+K Sbjct: 181 SLLGGLLMLASVIGLYVASGQVLGQGTFDWVTLQSIAAQIPESTQMWIFAGFAIAFAIKA 240 Query: 236 PVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGV 295 P+VPLH WLPDA ++AP L G+L K +G LR LPL P AS++ A + + L V Sbjct: 241 PLVPLHTWLPDAGTEAPVGAGTLLVGVLDKVGTFGFLRICLPLLPAASSKLAWLIILLAV 300 Query: 296 IGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGL 355 IGI YGA +A QTD+KR + +TS++H GF+ + ++ + + GA + M+ HG++ L Sbjct: 301 IGILYGAIVAAGQTDLKRFVTFTSIAHFGFIALGVFAFTTQSIAGAALYMVNHGIATGLL 360 Query: 356 FILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSF 415 F++ G L R ++ + GG+W L L A+AT+ MPGT +F+ EF++L G+F Sbjct: 361 FLIVGMLTARGGSKLVGDYGGVWKVAPILGGFFLVAALATIAMPGTNSFISEFLVLIGTF 420 Query: 416 QVVPVITVISTFGLVFASVYSLAMLHRAYFGKAK 449 P V++T G+V A+VY L + R G + Sbjct: 421 SRHPAWAVLATIGIVLAAVYMLWIFQRTMTGPVR 454 >UniRef50_D1AZ50 Proton-translocating NADH-quinone oxidoreductase, chain M n=3 Tax=Campylobacterales RepID=D1AZ50_SULD5 Length = 508 Score = 363 bits (932), Expect = 1e-98, Method: Composition-based stats. Identities = 172/495 (34%), Positives = 287/495 (57%), Gaps = 17/495 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L L+ P G L + + + R + + LS+ LW+ + Sbjct: 4 ILSLLVFFPAAAGLLGFLVAKESI---RAYGISVSAIEFVLSVILWMGFD------SANA 54 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 +Q +IP +G+S +L +DG+SL +V+L+ + ++A++ IEK ++++ Sbjct: 55 GYQFVEFYAFIPSYGMSYYLGVDGISLFLVILSTFITMIALIA--LSIEKDVKNLIISVL 112 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 ++ ++GVFL +D+ F+ FWE+ LVPM ++I WG G+ R+ AA KFF+YT A Sbjct: 113 FLEMTMVGVFLILDVIWFYAFWELSLVPMLYIIGGWG-----GEKRMYAAIKFFLYTFAG 167 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 ++ML+ IL + F++Y ATG+W+F + + + L FF+ FA+K+P+ P H Sbjct: 168 SVLMLVGILYMGFLYYEATGIWSFALPDWHLLQVPFTTQLWLFGAFFLGFAIKVPMFPFH 227 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLP AH QAPT GS+ LA +LLK +YG +RFSLPLFP+AS F + VI + Y Sbjct: 228 TWLPYAHGQAPTIGSIILAAVLLKMGSYGFVRFSLPLFPDASVYFLIPVAIICVIMVIYA 287 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 A +A+AQ D+K++IAY+S+SHMG V++ + + G++ M++HG+ + LF+L G Sbjct: 288 AMIAYAQDDMKQVIAYSSISHMGIVILGTFAMNAEGITGSIFLMLSHGIVSGALFMLVGV 347 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 +Y+R HT+ M GGL M + +A++G+P T FVGEF+ L G ++V VI Sbjct: 348 IYDRRHTKLMSQFGGLAQVMPRFATIYGIMLMASVGLPLTIGFVGEFLSLMGFYRVSWVI 407 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 T+ + G++ +VY L + +++FG + ++ L +S +EL ++ LV L+V LG Y Sbjct: 408 TLFAGTGIILGAVYMLVLYKKSFFGAVVHE-ENRGLKDLSAKELTALIPLVALVVALGVY 466 Query: 482 PQPILDTSHSAIGNI 496 P+P+L T ++ + Sbjct: 467 PKPLLSTIDMSVQKM 481 >UniRef50_A7H9U2 Proton-translocating NADH-quinone oxidoreductase, chain M n=4 Tax=Anaeromyxobacter RepID=A7H9U2_ANADF Length = 554 Score = 361 bits (928), Expect = 3e-98, Method: Composition-based stats. Identities = 178/555 (32%), Positives = 275/555 (49%), Gaps = 71/555 (12%) Query: 2 LLPWLILIPFIGG----------FLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGG 51 +L W P +G F+ ++ R IAL+T GL+ ++ W Sbjct: 8 VLSWATFFPLLGAAAIVVLLAVRFVANLPKKLVDDGARLIALLTSGLSFVAAIAAWRMYD 67 Query: 52 YSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSW----- 106 + T Q WI F I ++ +DGLS+ MV+L+GL+ +A + S Sbjct: 68 PTDT------GVQLAQHFVWIRAFNIEYYVGVDGLSISMVLLSGLISFVATIASMPWWSG 121 Query: 107 -------------------------KEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFF 141 + + + L+ + G++G F+++DMFLF+ Sbjct: 122 AKAAEMAGMVDDDHGHGHDDAHHPKHFSVRMVPGYMVMLLLLQTGMMGTFVSLDMFLFYV 181 Query: 142 FWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVH----- 196 FWE+ML+PMYFLI +WG G + AA KFF+YT A ++ML+AI+ + + Sbjct: 182 FWEVMLLPMYFLIGVWG-----GPRKEYAAIKFFLYTLAGSVLMLLAIIGIYYNSLPAML 236 Query: 197 --YNATGVWTFNYEEL-----------LNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGW 243 + TFN EL + L + FI FA+K+P+ P H W Sbjct: 237 ADGTMSSGHTFNLIELGKQGAQGQFLNAAPILGMQFTKLAFVALFIGFAIKIPMFPFHTW 296 Query: 244 LPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAW 303 LPDAH +APT SV LAG+LLK YG+LRF+ PL P+A+A A GVI I Y A+ Sbjct: 297 LPDAHVEAPTPISVILAGVLLKMGIYGILRFNYPLLPDATAWAANAMAVFGVINIVYAAF 356 Query: 304 MAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLY 363 + Q D+K+LIAY+SVSHMGF L+ + + GAV+ + HG+ + LF++ G +Y Sbjct: 357 VCLGQKDLKKLIAYSSVSHMGFSLLGMAAMTPAGISGAVLNLFTHGIISPMLFLIVGVIY 416 Query: 364 ERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITV 423 +R H R++ GGL +++ A+ A+LG+PG F+ EFM+ G+F V T+ Sbjct: 417 DRAHHREIEKFGGLAAELPEYTAIMGLAFFASLGLPGLAGFIAEFMVFTGAFPVFTTYTI 476 Query: 424 ISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQ 483 IS ++ + Y L +HR + GK + P ++ RE + L + ++LGFYPQ Sbjct: 477 ISATAVIITAAYYLWAIHRMFLGKLNP--VYKGYPDLNWRERISLYPLAAIAIVLGFYPQ 534 Query: 484 PILDTSHSAIGNIQQ 498 IL + ++ + Q Sbjct: 535 AILGVINRSLHLLIQ 549 >UniRef50_Q3MAR0 NAD(P)H-quinone oxidoreductase chain 4 2 n=84 Tax=cellular organisms RepID=NU4C2_ANAVT Length = 561 Score = 361 bits (927), Expect = 4e-98, Method: Composition-based stats. Identities = 176/543 (32%), Positives = 269/543 (49%), Gaps = 51/543 (9%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L +IL+P + K+ RW AL L + A Sbjct: 9 LTAIILLPLVASAFIPLLPDKEGKLVRWYALGVGIADFVLMCYTFWHH-----YDASSAT 63 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMW 122 +Q W+P+ G S +++DG+S+ +V+L G + L++L +W+ + F+ ++ Sbjct: 64 FQLVEKYDWVPQIGFSWAVSVDGISMPLVLLAGFVTTLSMLAAWQ-VNLKPRLFYFLMLV 122 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 + IGVF+A D+ LFF WE+ LVP+Y L+++WG G+ R AATKF +YT A+ Sbjct: 123 LYSAQIGVFVAQDLLLFFIMWELELVPVYLLVSIWG-----GQKRRYAATKFLLYTAAAS 177 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 + +LIA LA+ N TF+ EL +E LL G IAF VK+ + PLH Sbjct: 178 IFILIAGLAMALHGDNT----TFDIVELGAKNYPLALELLLYAGLLIAFGVKLAIFPLHT 233 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGA 302 WLPDAH +A S+ LAG+LLK YGL+R +L L P+A FAP+ LGVI I YG Sbjct: 234 WLPDAHGEASAPVSMILAGVLLKMGGYGLIRLNLELLPDAHIYFAPVLATLGVINIIYGG 293 Query: 303 WMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQL 362 +FAQT +KR +AY+SVSHMGFVL+ I + + + GA++QM++HGL AA LF L G Sbjct: 294 LNSFAQTHMKRRLAYSSVSHMGFVLLGIASFTDVGVSGAMLQMLSHGLIAAVLFFLAGVT 353 Query: 363 YERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVV---- 418 Y+R HT M +GG+ M + AL +A+L +PG FV E + G Sbjct: 354 YDRTHTMAMDNLGGIGQAMPKVFALFTAGTMASLALPGMSGFVSELKVFIGVTTSDIYSP 413 Query: 419 ---PVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQE------------------- 456 V+ ++ G++ +Y L+ML + ++G + Sbjct: 414 TFCTVMVFLAAVGVILTPIYLLSMLRQVFYGTGAELSCNINNGAYENQEDEGTACFGTDC 473 Query: 457 -------LPGMSLRELFMILLLVVLLVLLGFYPQP---ILDTSHSAIGNIQQWFVNSVTT 506 S+RE+F+ +VL++ +G YP+ + D A+ + + Sbjct: 474 LLPGEAVYRDASIREVFIAASFLVLIIGVGVYPKIATQLYDVKTVAVNTQVRQSYTQIAQ 533 Query: 507 TRP 509 + P Sbjct: 534 SNP 536 >UniRef50_Q89AT5 NADH-quinone oxidoreductase subunit M n=2 Tax=cellular organisms RepID=NUOM_BUCBP Length = 508 Score = 359 bits (923), Expect = 1e-97, Method: Composition-based stats. Identities = 234/506 (46%), Positives = 348/506 (68%), Gaps = 4/506 (0%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 MLLP L+ IPF GGFLC + K+ ++AL +M L LSL L + S Sbjct: 1 MLLPMLVSIPFFGGFLCLLFNQKNAKISYYLALTSMALVFILSLILLFNTINVIVSSISN 60 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 W E+ +PWI +FGIS HLA+D LS+LM+ LT +LG+++V CSWK+++K G F+ L Sbjct: 61 SSWSFEYIVPWIEKFGISFHLAVDRLSILMLNLTSILGLVSVFCSWKKVQKNIGLFYFGL 120 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGK---TRITAATKFFIY 177 +W LG +IG+F+++D+FLFF FWE+ ++P YFL+ +WG+K +D K I +A KFFIY Sbjct: 121 LWTLGSIIGIFISVDLFLFFCFWELSVLPTYFLMIMWGYKDNDRKFYYNNIFSANKFFIY 180 Query: 178 TQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPV 237 +Q SGLV+L++ L LV+ HY + TF+Y+ L +T M+ +E +MLGFF+AFA+K+P+ Sbjct: 181 SQISGLVLLLSTLVLVYTHYIYDHILTFDYDVLKHTSMNIVLESCIMLGFFLAFAIKIPI 240 Query: 238 VPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 VP H WLPD H +P G VD++GILLKT+ Y L+RF++PLFP+++ F+ I M+ G+I Sbjct: 241 VPFHSWLPDFHCYSPVIGVVDISGILLKTSIYALMRFNIPLFPHSTEIFSSIIMFFGIIT 300 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 IFYGA ++ Q +IKR IAY S+SHMGF+LIAIY+ +Q+AYQGA+IQ+I++ LS A LF+ Sbjct: 301 IFYGAIVSLFQNNIKRFIAYVSISHMGFILIAIYSINQVAYQGAIIQLISYSLSTAALFL 360 Query: 358 LCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV 417 L G +++ I T D+ MGGLWSK++W+P L F++ LG+PGTGNFVGEFMI G F Sbjct: 361 LSGHVFKSISTFDIDKMGGLWSKLRWIPGFLLIFSIINLGVPGTGNFVGEFMIFMGCFNS 420 Query: 418 VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQ-ELPGMSLRELFMILLLVVLLV 476 +I ++S F L+ ++ SL + + FG ++ +L M++ + + + L+VL++ Sbjct: 421 HLMIVILSIFSLILLALCSLMFVQKICFGPINNRYDFLCDLNVMTICDFLIFVFLLVLIL 480 Query: 477 LLGFYPQPILDTSHSAIGNIQQWFVN 502 ++G YP I+D S+S + +I+ F N Sbjct: 481 IIGLYPNIIIDVSYSPLCSIRNIFSN 506 >UniRef50_A5UVF7 Proton-translocating NADH-quinone oxidoreductase, chain M n=2 Tax=Roseiflexus RepID=A5UVF7_ROSS1 Length = 507 Score = 359 bits (923), Expect = 1e-97, Method: Composition-based stats. Identities = 175/505 (34%), Positives = 275/505 (54%), Gaps = 22/505 (4%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL +I +P +G + R V R +++ L LA G Sbjct: 6 LLSLMIWLPALGALVVLTLPRERVAAQRSVSMSAALLALA------AALGVVFFFDPARA 59 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 +Q + WIP +GIS +++DG+SL +VVLT L +A+ SW IE+ + FH ++ Sbjct: 60 GFQLVESVAWIPSWGISYTVSVDGISLWLVVLTAFLTPVALAASWGTIERQERAFHALVL 119 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + G+ GVF A DM LF+ F+E LVP LI +WG G R AA KFF YT Sbjct: 120 LLASGLFGVFTAQDMLLFYVFFEFTLVPTALLIGIWG-----GVERRYAAIKFFAYTFTG 174 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNT------PMSSGVEYLLMLGFFIAFAVKM 235 + +L+ I+ L +H ATGV+TF+ +L + ++ E L+ FFI FAVK Sbjct: 175 SVFLLLGIIGLYLLHGQATGVYTFDIATILASLQLGTLQLNPAAERLMFGLFFIGFAVKT 234 Query: 236 PVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGV 295 P+ P H W+ AH++AP++G++D+ G+L+K AYGL+R+++ LFP +A AP L V Sbjct: 235 PIWPFHTWMTTAHAEAPSSGAIDIVGLLIKIGAYGLIRYTIQLFPATAAWAAPAISVLAV 294 Query: 296 IGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGL 355 IGI Y AW+A+ QTD+KRL+AY SVSH+G +++ ++ + G+V M+ L+ L Sbjct: 295 IGILYAAWIAYQQTDMKRLLAYASVSHLGLIVLGMFALNPQGIAGSVAHMVNSALTTGAL 354 Query: 356 FILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSF 415 F++ G L R +R+++ GGLW L +L+L + ++G+PG FV EF +L G++ Sbjct: 355 FLVVGMLVARRGSRELKSYGGLWKSTPVLGSLTLILVLGSIGLPGLNGFVSEFAVLQGAW 414 Query: 416 QV---VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLV 472 + + + G V A+VY L M A+ G A ++A + P + REL +++++ Sbjct: 415 RSPGLGWRYALPALLGAVLAAVYLLHMYRMAFMGDAPPELA--QAPDVRPRELALLVIMA 472 Query: 473 VLLVLLGFYPQPILDTSHSAIGNIQ 497 +VL G YP + + I Sbjct: 473 TPVVLFGLYPNLLFGPMQQSATQIA 497 >UniRef50_B2TCE8 Proton-translocating NADH-quinone oxidoreductase, chain M n=21 Tax=Proteobacteria RepID=B2TCE8_BURPP Length = 518 Score = 359 bits (923), Expect = 1e-97, Method: Composition-based stats. Identities = 155/498 (31%), Positives = 261/498 (52%), Gaps = 21/498 (4%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVP-RWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 LL LI IP + G + + + RW+ALI + L +T Sbjct: 5 LLSLLIWIPIVAGVVVLRAGSDAARSRTRWLALIGAIAGFLPVIPLVTNFRNDVTS---- 60 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 Q + W P F I+ H+ +DG+SL +V LT L ++ V+ SW+ I + + Sbjct: 61 --MQFVENARWSPSFDIAWHVGVDGISLWLVALTALTTIIIVVASWESITERTAQYFGAF 118 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + + G + GVF ++D LFF +E L+P+Y LI WG R AA KFF + Sbjct: 119 LMLSGFMQGVFTSLDGMLFFISFEATLIPLYLLIGTWGQS-----NRSYAAVKFFFVSFL 173 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 ++L L+ + Y + +F+ T + + + L+ LGF AF VK+P+ PL Sbjct: 174 G------SLLMLMSMLYLYSQTHSFDLALWRETHLGTWPQVLIFLGFLAAFGVKVPMWPL 227 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H WLPD H PT +V + +LK YGLLRF+LP+ P AS FAP+ + L ++ + Y Sbjct: 228 HTWLPDVHLDGPTGAAVMIG--MLKLGGYGLLRFALPIAPQASHFFAPMMITLSLVAVIY 285 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 + +A QTD++RL+AY++V+HMG V + ++ +++ GA++QM+++G+ + + + G Sbjct: 286 ASLLALVQTDMRRLLAYSTVAHMGLVTLGLFVFNRIGQAGAIVQMLSYGVVSGAMLLCTG 345 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 LY+R T + GG+ + M A + F++A +G+PGT FVGEFM+L G+ + Sbjct: 346 MLYDRTKTASIAEYGGVANTMPRFAAFVMLFSMANIGLPGTSGFVGEFMVLMGAIRFNFW 405 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 I ++ L+ ++ Y+L M R FG + + L + RE ++ + +L++ +G Sbjct: 406 IGAMAATTLILSAAYTLWMYKRVIFGAIANARVAN-LKDLGKREFVLLGAMALLVLAIGI 464 Query: 481 YPQPILDTSHSAIGNIQQ 498 P+P D ++G + Sbjct: 465 NPKPFTDAIDPSVGTLLA 482 >UniRef50_UPI00016C46D6 proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C46D6 Length = 636 Score = 358 bits (919), Expect = 3e-97, Method: Composition-based stats. Identities = 141/452 (31%), Positives = 226/452 (50%), Gaps = 34/452 (7%) Query: 76 GISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAID 135 + +L +DGL+L +V L ++ V +L SW+ ++ G F+ L + GVIG FL+ D Sbjct: 118 NVQFYLGVDGLNLWLVALASVMLVPVILVSWESVQHRPGAFYGWLFVLQAGVIGAFLSFD 177 Query: 136 MFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFV 195 + LF+ F+E+ L+P +FLI WG R AA KFF+YT A L+ L+ ++ +V Sbjct: 178 VVLFYVFFELTLIPSFFLIGNWG----ATSARRDAARKFFLYTLAGSLLTLVGVIGVVLT 233 Query: 196 HYNATGVWTFNYEELLNT--------------------PMSSGVEYLLMLGFFIAFAVKM 235 + + G TF+ +L+ ++ L L F VK+ Sbjct: 234 NPSEDGTITFSIPKLMANVQEGMHAAHLKALAGDGSALAAKHQTQFWLFLALMAGFMVKV 293 Query: 236 PVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFA-PIAMWLG 294 P+ P H WLP A+ +APT ++ L+ ++ K +G+LR LPL P+A+ ++ P+ Sbjct: 294 PIWPFHTWLPSAYGEAPTGVTMLLSALMAKLGTFGILRLVLPLVPDAAIQYGLPVIGGFA 353 Query: 295 VIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAG 354 GI Y A A+A D+K +IAY+SVSH+GF+++ ++ ++ G+ + M+ HGLS Sbjct: 354 AFGIVYAALCAYASKDMKLVIAYSSVSHLGFLVLGLFAFNREGLAGSALHMVNHGLSTGA 413 Query: 355 LFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGS 414 LF G L +R T D+ GGL + L A+A++G+PG NFV E M+L G Sbjct: 414 LFASLGFLMDRYRTTDIAKFGGLMGRYPNFAILFFALALASVGLPGLNNFVSEMMMLAGL 473 Query: 415 FQV------VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQ---IASQELPGMSLREL 465 F + V++ G+ ++ Y ML +F K +S RE Sbjct: 474 FDARSPGLKSLALAVVAATGIFLSAWYVFTMLRAVFFNPLKEPERAAPEAPAGDVSRREF 533 Query: 466 FMILLLVVLLVLLGFYPQPILDTSHSAIGNIQ 497 F L L ++LG PQP+LD + + Sbjct: 534 FAFGSLAALCLVLGLLPQPLLDAMKQDVRKLS 565 >UniRef50_C4XMN2 NADH-quinone oxidoreductase chain M n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XMN2_DESMR Length = 493 Score = 358 bits (919), Expect = 3e-97, Method: Composition-based stats. Identities = 187/498 (37%), Positives = 284/498 (57%), Gaps = 15/498 (3%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L +I P + + R+ L +G L+L + G + +AG Sbjct: 7 LSLIIFWPLVAACVMPALRGDAAACRRFAVLAALG---ELALCALIAGLF----AAGSFG 59 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMW 122 + D WIP FGI L++DGLSL+ VVLT L+G+ +L S + + +H ++ Sbjct: 60 PELVEDAAWIPSFGIRYSLSLDGLSLIFVVLTALIGLCCMLASRHDDRERPALYHGLILA 119 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 L V G+FLA D+FLF FWE L+P++FLI ++GH ++ A KFF+++ G Sbjct: 120 SLTTVQGIFLASDVFLFALFWEAQLIPVFFLIGVFGHG-----DKLRVAMKFFLFSATGG 174 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 L+M +A++AL + NA F E L + V L F ++FA+K+P+VP+H Sbjct: 175 LLMFLAVIALGVLSANAPDGPNFALEALTRLDIPQNVGRWLFAAFVLSFAIKIPLVPVHM 234 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGA 302 WLPDAH++APTAGS+ LAG+LLKT Y L+RF+LPLFP A+ FAP LG++G+FY + Sbjct: 235 WLPDAHTEAPTAGSLILAGLLLKTGGYALIRFALPLFPEAAHAFAPALTVLGLVGLFYAS 294 Query: 303 WMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQL 362 +A AQ D+KRLIAY+S+ HMG + A+ +GS+LA GAV+ M++H L++ GLF L G + Sbjct: 295 AVAVAQEDVKRLIAYSSIGHMGLAVAAMVSGSRLALGGAVLLMVSHALTSGGLFSLAGAI 354 Query: 363 YERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVIT 422 ER+ +R ++GG+W+K A LF +A+ +PG FVGE MI+FG F+V + Sbjct: 355 GERLGSRRFDILGGIWNKAPHFGAAFLFCVLASAALPGLSGFVGEAMIVFGLFKVNVLAA 414 Query: 423 VISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYP 482 ++ G+ VY L + +G +S + P + RE ++ LL V +V LG +P Sbjct: 415 GLAVAGMAATLVYLLRLARDVLYGPPRSAVP---FPDLDAREAVLLSLLAVGIVWLGLFP 471 Query: 483 QPILDTSHSAIGNIQQWF 500 P+L + + I Sbjct: 472 GPVLGLAAEPLNAIAARV 489 >UniRef50_A1T694 Proton-translocating NADH-quinone oxidoreductase, chain M n=9 Tax=Actinomycetales RepID=A1T694_MYCVP Length = 526 Score = 357 bits (917), Expect = 5e-97, Method: Composition-based stats. Identities = 163/511 (31%), Positives = 270/511 (52%), Gaps = 28/511 (5%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L L +P +G + + +W+AL + L ++ + + + Q Sbjct: 7 VLTALWAVPMVGAVVVMLLPAAARGLAKWVALSVSLIVLGVAAVIAVGFDPAGDQ----- 61 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIE-------KYQG 114 +Q + WIP FG L +DG++L +VVLT +L L ++ W + + Sbjct: 62 -FQFVENYRWIPSFGTGYILGVDGIALALVVLTAVLLPLLIMAGWNDARDELSWGGRSVH 120 Query: 115 FFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKF 174 + ++ + G V+ +++D+ LF+ F+E ML+PMYFLI +G G R AA KF Sbjct: 121 IYFALILAVEGMVLISLVSLDILLFYVFFEAMLIPMYFLIGGFG-----GADRSRAAVKF 175 Query: 175 FIYTQASGLVMLIAILALVFVHYN--ATGVWTFNYEELLNTP------MSSGVEYLLMLG 226 +Y GL+ML +++ L A TF++ ++ ++ V +LL G Sbjct: 176 LLYNLFGGLIMLASVVGLYVATAGSDAFDAGTFDFRAIVAAVAGGEFVVNPVVMHLLFGG 235 Query: 227 FFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEF 286 F AFAVK P+ P H WLPDA +A A +V + I+ K +G++R+ LPLFP++++ F Sbjct: 236 FMFAFAVKAPLWPFHRWLPDAAVEATPASAVLMMAIMDKVGTFGMIRYCLPLFPDSASYF 295 Query: 287 APIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMI 346 + + + L VIGI YGA +A QTD+ RLIAYTS+SH GF+++ I+ + G+ + M+ Sbjct: 296 SGLIITLAVIGIVYGAVVAIGQTDVMRLIAYTSISHFGFIILGIFVMTTQGQSGSTLYMV 355 Query: 347 AHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVG 406 HG+S A LF++ G L R +R + GG+ L L +ATL +PG F+ Sbjct: 356 NHGISTAALFLIAGFLVSRRGSRLINAYGGVQKLAPVLAGTFLVAGLATLSLPGLAPFIS 415 Query: 407 EFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIA--SQELPGMSLRE 464 EF++L G+F PV V++ LV +++Y L M R G A + ++ + RE Sbjct: 416 EFLVLIGTFTRYPVFAVLAASALVLSAIYVLWMYQRMMTGPAPLSLVEGEHKIRDLVPRE 475 Query: 465 LFMILLLVVLLVLLGFYPQPILDTSHSAIGN 495 + ++ L+ LL++LG YP+P LD + A+ + Sbjct: 476 IAVVAPLIALLLVLGVYPKPALDVINPAVTH 506 >UniRef50_C5AJH4 Proton-translocating NADH-quinone oxidoreductase, chain M n=31 Tax=Bacteria RepID=C5AJH4_BURGB Length = 517 Score = 357 bits (916), Expect = 7e-97, Method: Composition-based stats. Identities = 163/502 (32%), Positives = 266/502 (52%), Gaps = 21/502 (4%) Query: 3 LPWLILIPFIGGFLCWQTER-FGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 L I P + G + RW+AL+ + L L++ L T Sbjct: 7 LSLAIWTPIVFGVAVLRIGSDRYPHRARWLALVGAIVGLLLTVPLVAGFDAHNT------ 60 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q PW+ FG + + +DGLSL +VVL+ ++ V+ SW+ + +H + + Sbjct: 61 AVQFTEYKPWLSAFGSAWRMGVDGLSLWLVVLSAFTTLVIVIASWESVTTRVAQYHGSFL 120 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + G +IGVF ++D LFF F+E L+P++ LI WGH R AA KFF + A Sbjct: 121 ILSGLMIGVFTSLDGMLFFIFFEATLIPLFVLIGTWGH-----ANRSYAAIKFFFISFAG 175 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 L+ML A+L L + TF+ + + L+ LGFF AFAVK+P+ P+H Sbjct: 176 SLLMLAAMLYLFGL------THTFDMAVWQQARLGFAPQLLVFLGFFAAFAVKVPMWPVH 229 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WL D ++ PT +V L ++K YG LRF+LP+ P+A+ AP+ + L ++ + Y Sbjct: 230 TWLQDVYTDGPTGAAVSLG--MIKIGGYGFLRFALPIAPDAAHYLAPVRIGLSLVAVVYA 287 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 + +A AQ D+ +++AY+SV+HMG V + ++ Q++ GA++QMI++G A +F+ G Sbjct: 288 SLLALAQKDMAKMLAYSSVAHMGLVTLGVFLFDQMSITGAIVQMISYGFVAGAMFLCVGA 347 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 LY+R TR + G+ + M L ++ F++A +G+PGT FVGEF+++ G+ +V I Sbjct: 348 LYDRTRTRAIAEYSGVANTMPRLALFAVLFSMANVGLPGTSGFVGEFLVIMGAVRVNFWI 407 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 I+ L+ ++ Y+L ML R FG K +L +S RE + L V+++ +G Y Sbjct: 408 GAIAALTLILSAAYTLWMLKRVIFGAIKHDRVG-KLIDLSRRESVVFAALAVIVLAIGIY 466 Query: 482 PQPILDTSHSAIGNIQQWFVNS 503 P+P D A +I + Sbjct: 467 PKPFTDVIDPAAASIVAQLERA 488 >UniRef50_Q9MD18 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Scenedesmus obliquus RepID=Q9MD18_SCEOB Length = 521 Score = 355 bits (913), Expect = 2e-96, Method: Composition-based stats. Identities = 162/497 (32%), Positives = 258/497 (51%), Gaps = 14/497 (2%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL ++++P K+ R+ AL+ +TL L +LW + + Sbjct: 24 LLLTVLIVPLARALFLCVLPGKESKLHRFYALLFTLVTLILCTRLWRGF---VPAAVEPF 80 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q + W I + +D LSL MV+LT L LAVLCSW + F+ L+ Sbjct: 81 QQVVGLNRSWNGLLSIKLEFGLDSLSLWMVLLTAALMPLAVLCSWNTQNAHSQSFYRLLL 140 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + + F ++D+ F+ +E L+PM+ LI L G +A ++ AA +YT Sbjct: 141 ALESFLFRCFTSLDLLCFYVLYECSLLPMFLLIGLGGSRA----RKVRAAYLLVLYTLVG 196 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 L L + + T NY L + + S + LL GFF+AFAVK+P++PLH Sbjct: 197 SLA------MLPCLLLLYSRAGTTNYLLLRSLNIESSRQLLLWWGFFLAFAVKVPLMPLH 250 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLP+AH + TAGSV LAG+LLK YGLLRF+L +FP SA P + +IG+ Y Sbjct: 251 LWLPEAHVERSTAGSVLLAGVLLKLGTYGLLRFNLYMFPERSAYLGPRVSTICLIGVIYR 310 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 + Q D+K+++AY+SV+HM V++A++T +++ G++ M+AHG+ + LF+ G Sbjct: 311 SLTTLRQVDLKKIVAYSSVAHMSMVVLALFTMNEVGILGSIFTMLAHGVRSPALFLCVGA 370 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 LY+R HT+ ++ +GG + M F++ + +P T NFVGEF+ L G F V Sbjct: 371 LYDRTHTKRLKYLGGAATAMPLFSIWFFIFSLCNMALPLTPNFVGEFLSLCGIFAQNWVS 430 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 I G++ ++VY+L R G K Q S + ++ RE + + +L ++ + G Sbjct: 431 LTICLGGVILSAVYTLWAYARVVHGMPKIQYLS-GMADLNRREWWSLAILAIIALWWGLK 489 Query: 482 PQPILDTSHSAIGNIQQ 498 P +LD+ S + QQ Sbjct: 490 PGAVLDSLGSTVYYWQQ 506 >UniRef50_O47497 NADH-ubiquinone oxidoreductase chain 4 n=50 Tax=Metazoa RepID=NU4M_METSE Length = 491 Score = 355 bits (911), Expect = 3e-96, Method: Composition-based stats. Identities = 171/482 (35%), Positives = 260/482 (53%), Gaps = 24/482 (4%) Query: 17 CWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFG 76 + R + AL TL +L LW Q+Q+ WI Sbjct: 22 VMRVPRDNSVKLKRTALEWSLATLTATLILWAAFDME-------GQFQTINQTEWIVPPA 74 Query: 77 ISI-----HLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVF 131 ++ LA+DG+SL ++LT LL + +L SW I+ F L L+++ ++GVF Sbjct: 75 LNFKWGPLFLAVDGISLFFLILTALLTPICILISWNSIKFLLKEFLLCLLFLEVLLMGVF 134 Query: 132 LAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILA 191 A+D+ LF+ +E +L+PM+ LI +WG + + ++ A+ FF YT + ML+ I Sbjct: 135 SALDLLLFYILFEGILIPMFLLIGVWGSR----EEKVRASYYFFFYTFVGSVFMLLGIFQ 190 Query: 192 LVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQA 251 L + V T +Y+ LLN + + + GFF++ AVK+P VP H WLP AH +A Sbjct: 191 LY------SSVGTTDYQALLNIELPISTQKWIFAGFFLSLAVKIPQVPFHIWLPQAHVEA 244 Query: 252 PTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDI 311 P +GSV LAGILLK YG LRF+ P+ P A+ FAP + L VI I YG+ Q D+ Sbjct: 245 PVSGSVILAGILLKLGGYGFLRFTWPILPAATEYFAPFVIMLSVIAIIYGSLTTCRQVDL 304 Query: 312 KRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDM 371 KRLIAY+SV+HMG V + ++T + AV M+AHGL ++ LFI LYER HTR + Sbjct: 305 KRLIAYSSVAHMGLVTLGLFTHTIEGLVAAVFMMLAHGLVSSALFIAVTYLYERHHTRLI 364 Query: 372 RMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVF 431 + G+ M ++ L + + +P + NFV EF L +F+ VI V++ G+V+ Sbjct: 365 KYYRGITFSMPIFVSVFLVLTLTNMAIPLSCNFVAEFFSLLAAFEYNIVIGVLAATGMVW 424 Query: 432 ASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHS 491 ++ YSL + +R FG + + + ++ REL I LV+L+ +LG P I+D + Sbjct: 425 SAAYSLYLYNRVSFGASSNYLLFTR--DLNRRELIAISPLVILIFILGVLPSLIIDPVKN 482 Query: 492 AI 493 AI Sbjct: 483 AI 484 >UniRef50_C1ZAS9 NADH dehydrogenase subunit M n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZAS9_PLALI Length = 559 Score = 354 bits (908), Expect = 6e-96, Method: Composition-based stats. Identities = 180/540 (33%), Positives = 271/540 (50%), Gaps = 44/540 (8%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLW--------LQGGYS 53 L+ + +P + G + V RW AL LA+++QL + Sbjct: 8 LMSCALFLPVLWGLGLFGFPSRAVSAIRWYALAGACCELAITVQLAGIALGWIDASPAVN 67 Query: 54 LTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQ 113 + ++ +PWIP + ++ L +DG SL +++LT L+ VL+++ SW + Sbjct: 68 ASTTSLRNDILLGMSLPWIPTWNVNYSLGVDGFSLPLILLTSLIFVLSIVASWSIKTHIR 127 Query: 114 GFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATK 173 GF L+ + GV+GVFLA+D FLFF WE+ML+PMYFLI LWG G R AA K Sbjct: 128 GF-LFLLLLLETGVMGVFLALDFFLFFVMWEVMLLPMYFLIGLWG-----GPRREYAAIK 181 Query: 174 FFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEE----------------LLNTPMSS 217 FF+YT A G+ +L+A+L + + + L + Sbjct: 182 FFLYTLAGGVCLLMAMLMVYSASGGSFDLLELARMAQGQAPKPGMDLDQGIALTAAMGDT 241 Query: 218 GVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLP 277 +++ + + IAF +K+P VPLH WLPDAH +APT S+ LAGILLK YG LR ++P Sbjct: 242 SLQWRVFVLLLIAFLIKLPAVPLHTWLPDAHVEAPTPVSMILAGILLKLGGYGFLRIAIP 301 Query: 278 LFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYT----- 332 + P AE+A + LGV + YGA A AQ+D KRL+AY+SVSHMG+VL+ + Sbjct: 302 ICPLGFAEWAWFMVALGVFCVLYGALAALAQSDFKRLVAYSSVSHMGYVLMGLGAFRFQE 361 Query: 333 ---------GSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKW 383 S + A QM+AHG+ +AG+F + G LY+R+ RD+R GG+ S Sbjct: 362 LTGVVLNPDFSTMGLSAATFQMVAHGIVSAGMFFVVGVLYDRVKHRDLRQFGGIASLQPH 421 Query: 384 LPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRA 443 A++ A LG+PG F+GE +F + V +V G++ + Y L L R Sbjct: 422 FSAIAAGIFFAGLGLPGLCGFIGEAFSIFSVWHVDRFFSVGGALGMILTAGYILWALQRV 481 Query: 444 YFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNS 503 Y G + + L ++ RE + +L+ + LG YP L+ A + Q S Sbjct: 482 YLGPTYTGPNREYLTEINFREYTVGYILLAFAIGLGVYPAMALNVIEPASRQLVQQISGS 541 >UniRef50_D2QSX5 Proton-translocating NADH-quinone oxidoreductase, chain M n=3 Tax=Sphingobacteriales RepID=D2QSX5_9SPHI Length = 492 Score = 352 bits (905), Expect = 1e-95, Method: Composition-based stats. Identities = 168/509 (33%), Positives = 268/509 (52%), Gaps = 18/509 (3%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 ML +LIL P + L + K L +L GY+ Sbjct: 1 MLTLFLILFPAVAATLIFFFGGERAKQ----------AALLAALAELACAGYAFFSFKPD 50 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 Q FD PWI GI + IDG+S+L+V+LTGLL VL ++ K F+ + Sbjct: 51 ASSQFAFDYPWIGSLGIRLSAGIDGISVLLVLLTGLLVPFIVLSTFNRTYKQPTTFYALM 110 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 +++ ++GVF A D FLF+ F+E L+P+YFL A+WG G+ RI KFF+YT Sbjct: 111 LFMQAALMGVFTARDGFLFYLFFEAALIPIYFLAAMWG-----GENRIPVTFKFFVYTIF 165 Query: 181 SGLVMLIAILALVFVHY-NATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 L MLIA++ L + A + + ++ E L FFIAFA+KMPV P Sbjct: 166 GSLFMLIALVYLYYQTPPTAVAAHSSAIADFYKLNLTPQAENWLFWAFFIAFAIKMPVFP 225 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 H W PD + ++PT ++ LAGI+LK YGL+RF LP+ P + A+ L VIGI Sbjct: 226 FHTWQPDTYVESPTPATMLLAGIMLKMGVYGLIRFILPIVPLGVETWGKTAIILSVIGIV 285 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 YGA +A Q D+KRLIAY+S SH+G + +++ ++ QGA+IQM+AHG++ G+F + Sbjct: 286 YGAIIAIRQRDMKRLIAYSSFSHVGLMAAGVFSQTETGMQGALIQMLAHGINVVGMFFVA 345 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP 419 ++ R TR + +GG+ L + + ++ +P T FVGEF++L G + Sbjct: 346 DVIFSRTSTRQLDQLGGITQSTPKLTVYFMIMLLGSVALPLTNGFVGEFLLLHGVYTFNH 405 Query: 420 VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLG 479 + + + F ++F +VY L M ++ FG S+ ++ ++ E ++ + LVV++ +G Sbjct: 406 YLGLAAGFTIIFGAVYMLRMFQKSMFGPTTSR--TESFTDLTTSESWVFIPLVVMVFWIG 463 Query: 480 FYPQPILDTSHSAIGNIQQWFVNSVTTTR 508 YP L + A+ N+ ++ + + + Sbjct: 464 IYPHTFLKVTEPAVANLMKYIGTTAVSMK 492 >UniRef50_C1F9D1 NADH dehydrogenase I, M subunit n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F9D1_ACIC5 Length = 505 Score = 352 bits (903), Expect = 2e-95, Method: Composition-based stats. Identities = 177/502 (35%), Positives = 270/502 (53%), Gaps = 25/502 (4%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L + +P G + R G ++ +W AL+ T L+L L Y G P Sbjct: 6 ILSLMTFLPAAGAVVVALLPRKG-RLIQWWALLVSLATFLLTLHLPAHFQY------GRP 58 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 +Q E ++PWI I+ H+ +DGLS+ +VVLTG L + VL SWK IE F+ + Sbjct: 59 GFQFEVNIPWILHPAINYHIGVDGLSMWLVVLTGFLAPIGVLVSWKAIETRTKEFYFLFL 118 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 +IGVF+++D+FL++ FWE+ LVPM LIA++G AA KFF+YT Sbjct: 119 LQQTAMIGVFISLDLFLYYGFWELTLVPMAILIAMFGRSRGP-----RAAIKFFLYTFIP 173 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNT----PMSSGVEYLLMLGFFIAFAVKMPV 237 + L+AIL L TF+YE+L + S + L F +AFAVK+PV Sbjct: 174 SALFLVAILWLYAR------TGTFDYEKLQASIATGGFSPQALIWVSLAFLLAFAVKVPV 227 Query: 238 VPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 PLHGWL D ++APTA ++ +AG K Y +LRF+L LFP S EFAP + L VIG Sbjct: 228 FPLHGWLGDGIAEAPTAMAMVIAG---KLGLYSILRFNLGLFPEQSREFAPWMIALAVIG 284 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 + YGA +A Q D+KRL+AY+ +S + F + I+ S GAV Q+I G+S L + Sbjct: 285 LIYGALVALVQKDMKRLVAYSILSQLSFCTLGIFCFSLTGLDGAVYQIINEGVSGGALLV 344 Query: 358 LCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV 417 L G LYER T ++ GGL ++ + L + ++ +G+P FVGEFM+L GSF Sbjct: 345 LLGILYERYGTFEIAQYGGLSKRLPHMATLYVITTLSLIGLPILNGFVGEFMVLSGSFPG 404 Query: 418 VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVL 477 VI+T G++ ++ Y L M+ R ++G + + + ++ REL + +++L+V+ Sbjct: 405 HHGWVVIATLGVILSASYMLWMIQRVFYGPESALVQGRATFDVTGRELITVWPMILLMVV 464 Query: 478 LGFYPQPILDTSHSAIGNIQQW 499 +G + + + Sbjct: 465 MGVASPYWIKAIDGGMKPLANV 486 >UniRef50_A4FPS9 NADH dehydrogenase I chain M n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FPS9_SACEN Length = 525 Score = 351 bits (901), Expect = 4e-95, Method: Composition-based stats. Identities = 170/506 (33%), Positives = 266/506 (52%), Gaps = 35/506 (6%) Query: 14 GFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIP 73 G + R +V +W AL + + L+ WL+ + Q +PWIP Sbjct: 14 GSVVVGLLRGNEQVAKWTALAFSLVEVVLAAVAWLE------YDPAGARMQLTSSVPWIP 67 Query: 74 RFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI---EKYQGFFHLNLMWILGGVIGV 130 F I++ +DG++L+MV + LL L + SW E + G F L+ +GV Sbjct: 68 AFDINLSFGVDGIALVMVAVIALLLPLVLGYSWGEKLPAGRTHGGFFSLLLLEQALTVGV 127 Query: 131 FLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAIL 190 F A D+FLF+ +E+ML+PMYFLI +G G+ R AA KFF+Y+ GL+ML + + Sbjct: 128 FAATDVFLFYVLFEIMLIPMYFLIGGYG-----GEQRTYAAVKFFLYSFLGGLIMLASAI 182 Query: 191 ALVFVHYNATGVWTFNYEELLN--TPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAH 248 G TF++ +L+ + V+ + LGFF AFA+K P+VP H WLPDA Sbjct: 183 GAYVYSAQVLGQGTFDWAKLVPVLADAPTDVQVWIFLGFFTAFAIKAPLVPFHTWLPDAA 242 Query: 249 SQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQ 308 +QAP +V + G+L K +G LR+SLPL P AS P+ + L V+G+ YG+ AF Q Sbjct: 243 AQAPIGVAVIVVGVLDKVGTFGFLRYSLPLTPEASKLLTPLVLVLAVLGVLYGSLQAFGQ 302 Query: 309 TDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHT 368 D+KR IAY S++H GF+ + I+ + + GAV MI H ++ L + G + R + Sbjct: 303 DDLKRFIAYVSIAHFGFIALGIFAFTSQSQVGAVSYMINHSIATGMLILAIGMVISRGGS 362 Query: 369 RDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFG 428 + GG+ L + L ++TL +PGT +F+ EF++L G+F PV TV++T G Sbjct: 363 TRIADYGGMARLTPLLAGVLLVAGLSTLSLPGTNSFISEFLVLIGAFPTQPVYTVLATVG 422 Query: 429 LVFASVYSLAMLHRAYFGKAK-------------------SQIASQELPGMSLRELFMIL 469 +V A+VY L + + G + + + + + LRE ++ Sbjct: 423 MVLAAVYVLRIYQQVMQGPVRGDALLASAAGPGAVGDPELPEKHRRGITDLDLREKAVLA 482 Query: 470 LLVVLLVLLGFYPQPILDTSHSAIGN 495 L+VL++ LGFYP+P+LD ++G Sbjct: 483 PLIVLVLALGFYPKPVLDVIGPSVGA 508 >UniRef50_Q67KP5 NADH dehydrogenase I subunit M n=1 Tax=Symbiobacterium thermophilum RepID=Q67KP5_SYMTH Length = 508 Score = 350 bits (900), Expect = 5e-95, Method: Composition-based stats. Identities = 178/514 (34%), Positives = 275/514 (53%), Gaps = 26/514 (5%) Query: 2 LLPWLILIPFIGGFLC-WQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 +L +I +P + + + + ++ W+A I + AL+L L Q + +A Sbjct: 1 MLSLIIFVPLVFALVMLFFVPKTQERLLYWLAGIGTLIPFALALVLAAQWPTAEVSTAPY 60 Query: 61 PQ-WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLN 119 Q + +PWI G+ L +DG + M++L+ LL LAVL S+ I+ + + Sbjct: 61 AQGMRFVTHVPWIQAIGVHYTLGVDGFAFTMLLLSTLLFPLAVLASYGYIKDRVKDYLVL 120 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 L+ + G GVF +D LF+ FWE++L+PMYFLI +WG G+ R AA KFF+YT Sbjct: 121 LLILATGTNGVFATLDFMLFYVFWEIVLLPMYFLIGIWG-----GERREYAAIKFFLYTL 175 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPM---SSGVEYLLMLGFFIAFAVKMP 236 VML+ + L Y ATGV TFN ++ +G+ + FAVK+P Sbjct: 176 IGSTVMLVGAIYL----YVATGVGTFNLLQMAAASSKLPITGLTTFAFFALLVGFAVKVP 231 Query: 237 VVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVI 296 + P H WLPDAH +APT S+ LAGILLK +Y ++R S P+ P + ++A + GV+ Sbjct: 232 MFPFHTWLPDAHVEAPTPISMLLAGILLKLGSYAMVRISHPMLPQLATKYADLLFVFGVV 291 Query: 297 GIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQL----------AYQGAVIQMI 346 GI Y A A AQ D K+ +AY+SV+HMGF ++A+ S+L A QG I Sbjct: 292 GILYAALAAMAQKDFKKQVAYSSVNHMGFFIMALAAASKLAPTSPELAQVALQGGYFVTI 351 Query: 347 AHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVG 406 AHGL + F G YER HTRD+R +GG++ + + + F A A LG+PG F+G Sbjct: 352 AHGLISPLFFFAVGMFYERTHTRDLRKLGGMFLTIPVVSFATAFVAFANLGLPGLAGFIG 411 Query: 407 EFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELF 466 EF+ L GS+ + +++ G+V + + L + G+AK + Q L ++L+E Sbjct: 412 EFISLTGSYPAFGLWVLVAGLGMVITAAWHLLTMRNVLLGEAKPEY--QGLADITLKEKI 469 Query: 467 MILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWF 500 + L VL+V G YP+P++ S++ + Q Sbjct: 470 IFAPLAVLIVFFGVYPRPVMALLQSSVEVLTQVM 503 >UniRef50_UPI00019790B7 NADH dehydrogenase subunit M n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI00019790B7 Length = 528 Score = 350 bits (900), Expect = 6e-95, Method: Composition-based stats. Identities = 159/508 (31%), Positives = 268/508 (52%), Gaps = 20/508 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL +I P L + + R A++ L L + LW + + Sbjct: 4 LLNIVIFFPAFAALLLYVLKGEN---SRIFAILVGILELLFVVLLWNEFNVNY------G 54 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q I + IS + IDG+SL ++ L + +L L +K + + ++ Sbjct: 55 GIQLSTHYELISSYNISYFVGIDGISLFLLTLNAFITLLT-LYFFKYLRTP---LIIAIL 110 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 ++ V+GVF A+D+ +F+ FWE+ L+P+ ++I +WG G+ RI A+ K+F+YT + Sbjct: 111 FLESIVMGVFSALDVMMFYIFWELSLLPVLYIIGVWG-----GERRIYASIKYFLYTFGA 165 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 L+ML+ IL + ++ G W+FN + + + L + FFI AVK+P+ PLH Sbjct: 166 SLIMLVGILYFAYQYFLIMGAWSFNLIDWYQISLDIDTQKWLFVAFFIGMAVKIPIFPLH 225 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 W P A++QAP GSV L+ +L K YGLLR LPLFP S+ + + V + YG Sbjct: 226 SWQPHAYTQAPLVGSVLLSAVLSKMGTYGLLRLVLPLFPFTSSNISLFIGLVCVFMVVYG 285 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 A++A AQT++K +AY+S+SHMG +++ I++ + GAV M+AHG+ LF+L G Sbjct: 286 AFIALAQTNLKTFLAYSSLSHMGIIVLGIFSLNTEGLSGAVFFMVAHGVVVGALFMLVGV 345 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 L R T+D++ + GL M ++ + +L +P T FVGE + L+G FQV P+I Sbjct: 346 LQTRTQTQDLQDVQGLAHSMPKYSSVFGIVMMCSLALPLTMGFVGEVLSLYGFFQVNPII 405 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 ++ ++Y L M + +FG A + + L ++LRE + + ++V+++ LG Y Sbjct: 406 AFLAGSSFFVGAIYMLTMFRKVFFGSALPKYTT--LKDLNLREKIVFIPILVIIIWLGVY 463 Query: 482 PQPILDTSHSAIGNIQQWFVNSVTTTRP 509 P+P+L ++ + Q + T P Sbjct: 464 PKPLLTPISTSAETLSQVIAAKIQLTNP 491 >UniRef50_D2L238 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L238_9DELT Length = 498 Score = 350 bits (899), Expect = 6e-95, Method: Composition-based stats. Identities = 189/504 (37%), Positives = 281/504 (55%), Gaps = 15/504 (2%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L +L+ P L R V R AL G+ L LS+ + L +AG P Sbjct: 7 LTFLVFWPLAAAMLMPLF-RGSVAACRRFALAAAGMELMLSVLVVLLF------AAGRPD 59 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMW 122 D WIP GI L DGLSL+ VVLT +G+ + S + + +H ++ Sbjct: 60 LPVVEDAAWIPELGIRYTLTCDGLSLVFVVLTACIGLCCMAASRHDDTRRPALYHALILC 119 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 L V GVFLA D+FLF FWE LVP++FLI ++GH R+ A KFF+++ G Sbjct: 120 SLATVQGVFLATDLFLFALFWEAQLVPVFFLIGVFGHG-----DRMRVAIKFFLFSAVGG 174 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 L+M +A++AL + TF +L P+ L F ++FA+K+P+VP+H Sbjct: 175 LLMFLAVIALGIYAADGPNGPTFALFDLTRLPLPVTTGRWLFAAFVLSFAIKIPLVPVHM 234 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGA 302 WLPDAH++APTAGS+ LAG+LLKT Y L+RF+LPLFP A+ FAP+ +LG+ G+FY + Sbjct: 235 WLPDAHTEAPTAGSLILAGLLLKTGGYALIRFALPLFPEAALAFAPLLTFLGLAGLFYAS 294 Query: 303 WMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQL 362 +A AQ D+KRL+AY+S+ HMG V++AI +GS+LA GAV+ M++H L++ GLF L G + Sbjct: 295 AVALAQEDVKRLVAYSSIGHMGLVVVAIVSGSRLALGGAVLLMVSHALTSGGLFALAGMI 354 Query: 363 YERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVIT 422 ER+ +R ++GGLW++ A L +A +PG FVGE MI+FG F+ Sbjct: 355 GERLGSRRFEVLGGLWNRAPAFGAAFLCCVLAAAALPGLSGFVGEAMIVFGLFKAHLAAG 414 Query: 423 VISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYP 482 + + G+ Y L + FG A+S P + RE +++ LV+ ++ LG +P Sbjct: 415 LFAVAGMAVTLAYLLRLARDVLFGPAQSSAL---FPDLDARETTLLVSLVLAMLWLGLFP 471 Query: 483 QPILDTSHSAIGNIQQWFVNSVTT 506 P+L + I +++ Sbjct: 472 GPVLSLVSGPLDLIAGHVWPALSG 495 >UniRef50_Q0H8X6 NADH-ubiquinone oxidoreductase chain 4 n=10 Tax=Dikarya RepID=NU4M_USTMA Length = 484 Score = 349 bits (895), Expect = 2e-94, Method: Composition-based stats. Identities = 150/499 (30%), Positives = 270/499 (54%), Gaps = 24/499 (4%) Query: 2 LLPWLILIPFIGGFLCWQTE---RFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSA 58 +L L++IP +G + + R + +AL T + LS+ LW + S ++ Sbjct: 1 MLTLLLIIPLVGALMLAPMQGNTRQSESQMKRLALGTSLINFVLSIVLWGEFDSSTSEYQ 60 Query: 59 GIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHL 118 ++ +H+ +DG+SL V+LT + + +L +W I++ +F + Sbjct: 61 FTQEFNQVNFC--------HLHIGVDGISLYFVLLTTFITPICILSNWDNIKEQLKYFLM 112 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 + + +I VF+ +D+ LF+ F+E +L+P++ ++ +WG TR+ AA F+YT Sbjct: 113 CFLVLETLLIAVFVVLDILLFYVFFESVLIPLFLIVGIWG----GSATRVRAAFLLFLYT 168 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 L ML+A L + + V + +++ + + ++ + LL L FI+ A+K P++ Sbjct: 169 LFGSLFMLLAFLVIYY------NVGSTDFQVVSLSEINLESQKLLWLAVFISMAIKTPLL 222 Query: 239 PLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 P H WLP AH++AP AGSV LAG++LK A YG +R + P+A++ F+P+ + VI + Sbjct: 223 PFHVWLPRAHAEAPLAGSVILAGLILKLATYGYMRILIQFLPDATSYFSPLVQTIAVITL 282 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFIL 358 Y + QTD K L+AY+S+ HM V++ +++ + GA++ IAHG+ + LFIL Sbjct: 283 IYASLATLRQTDFKALVAYSSIGHMAVVVLGLFSNTIQGIDGALLLSIAHGVVSPALFIL 342 Query: 359 C-GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV 417 G LY+R HTR +R G+ + M + F + +P + N+ GEF+ L G+FQ Sbjct: 343 VGGVLYDRYHTRTIRYYRGMTAYMPLFSIMFFVFTIFNAAVPLSANWAGEFLCLAGAFQR 402 Query: 418 VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVL 477 PV V+ + G+V ++ YS+ + +R FG + ++ RE ++L L+ + V+ Sbjct: 403 NPVFAVLGSTGIVLSAAYSIWLYNRIAFGAWSKYLNY--TTDLTRREFMLLLPLLFVAVV 460 Query: 478 LGFYPQPILDTSHSAIGNI 496 G +P ILD+ H++ + Sbjct: 461 FGIFPNIILDSIHASTSGL 479 >UniRef50_C0ZYI8 NADH-quinone oxidoreductase chain M n=22 Tax=Actinomycetales RepID=C0ZYI8_RHOE4 Length = 534 Score = 347 bits (891), Expect = 6e-94, Method: Composition-based stats. Identities = 171/509 (33%), Positives = 269/509 (52%), Gaps = 29/509 (5%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L L L+P IG + + + +AL L ++ GG + G Q Sbjct: 19 LTALWLLPLIGAGVVLALPARSYQFAKSLALAVSVAVLVIA------GGLGVAFDRGGGQ 72 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI-------EKYQGF 115 +Q WIP FG S L +DG++L++V+LT +L L ++ W ++ ++ Sbjct: 73 FQFVESHSWIPAFGTSYTLGLDGIALVLVLLTAVLVPLLLIAGWNDVPADPASPKRMPHT 132 Query: 116 FHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFF 175 + ++ + V+ F A+D+ LF+ F+E ML+PMYFLI +G G R AA KF Sbjct: 133 YFALILVVESMVMISFSALDILLFYIFFEAMLIPMYFLIGGFG-----GVGRSRAAVKFL 187 Query: 176 IYTQASGLVMLIAILALVFVHY---NATGVWTFNYEELLNTPMS------SGVEYLLMLG 226 +Y GLVML A++ L V + TF++ + + S GV L LG Sbjct: 188 LYNLLGGLVMLAAVIGLYVVTTRDESPFTSGTFDFRAIASAASSGELGVGPGVLNALFLG 247 Query: 227 FFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEF 286 F AFAVK P+ PLH WLPD+ ++ + +V + ++ K + ++R+ L LFP +S+ F Sbjct: 248 FMFAFAVKAPLWPLHSWLPDSAVESTPSTAVLMMAVVDKVGTFAMIRYCLQLFPESSSTF 307 Query: 287 APIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMI 346 AP + L VIGI YGA +A AQTD+ RLIAYTS+SH GF+++ I+ + + G+ + M+ Sbjct: 308 APWIITLAVIGIVYGAILAIAQTDVMRLIAYTSISHFGFIILGIFAMTSQSQAGSALYMV 367 Query: 347 AHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVG 406 HG+S A LF++ G L + TR + GG+ L L +ATL +PG FV Sbjct: 368 NHGISTAALFLIAGFLVSQRGTRSIAAYGGVQKVAPVLAGTFLVAGLATLSLPGLAPFVS 427 Query: 407 EFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELF 466 EF++L G++ V + +T LV +++Y L + R G K + + ++ REL Sbjct: 428 EFLVLIGTYSRYHVAAIAATVALVLSAIYILWLYQRMMGGPVKEGQGT--IRDLARRELV 485 Query: 467 MILLLVVLLVLLGFYPQPILDTSHSAIGN 495 ++ L+ LL+LLG YP+P LD A+ + Sbjct: 486 VVAPLIALLLLLGIYPKPALDVITPAVSH 514 >UniRef50_D2RZ76 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RZ76_9EURY Length = 509 Score = 347 bits (891), Expect = 6e-94, Method: Composition-based stats. Identities = 179/515 (34%), Positives = 274/515 (53%), Gaps = 31/515 (6%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 M++ LI + IG + + +V +A + ALSL ++ S + Sbjct: 1 MMIEALIAVALIGALVTFVAP---NRVAGKLAFAISLVPAALSLWMFTAFDGS-GNALLD 56 Query: 61 PQWQSEFDMPWIP--RFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHL 118 + E + WI + I + +DG+SL +VV+T +L LA+L SW I+ + F+ Sbjct: 57 GELAFESHLEWIQFGDYSIEWFVGLDGISLPLVVMTTILCTLAILSSWTPIDSRESQFYG 116 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 +++I +IGVF A+D F++F FWE +L+PMY LI +WG G R AA KFF+YT Sbjct: 117 LVLFIEANLIGVFSALDFFVWFIFWEAVLIPMYLLIGVWG-----GPDRKYAAIKFFVYT 171 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSG-------------VEYLLML 225 + LVM + +ALVF +A +F ++ + ++ G L+ + Sbjct: 172 NVASLVMFGSFIALVFGLGDAA--TSFALPDIADAMVNGGGVQSSVFGIDPGTFTALVFI 229 Query: 226 GFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAE 285 F+ FAVK+PVVP H WLPDAH QAPT SV LAG+LLK Y LLRF+ +FP A Sbjct: 230 AMFLGFAVKVPVVPFHTWLPDAHVQAPTPASVLLAGVLLKMGTYALLRFNFTMFPEQVAT 289 Query: 286 FAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQM 345 +A + VI + YGA +A AQTD+KR++AY+SVS MG+V++ + +Q GA QM Sbjct: 290 YAVPIAAIAVISVIYGAMLALAQTDLKRIVAYSSVSSMGYVILGLIAYTQFGVGGATFQM 349 Query: 346 IAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFV 405 ++HGL + +F+ G +Y HTR + M GL +M + + A +G+P F Sbjct: 350 VSHGLISGLMFMSVGVIYNVTHTRSVEEMSGLADRMPIAVGILVAGAFGYMGLPLMSGFH 409 Query: 406 GEFMILFGSFQ----VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMS 461 GEF I FG+FQ P+ T ++ FG+V + Y L L R FG + ++ Sbjct: 410 GEFTIFFGAFQADFAYAPLFTALAMFGIVIVAGYLLFALQRTVFGPYHLE-TDYDVGRAP 468 Query: 462 LRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNI 496 L ++ + +L+ L++ LG P+ I D A+ I Sbjct: 469 LHDIAPMFVLLALIIALGVAPELIFDMITDAVDPI 503 >UniRef50_Q3Z7Z2 Proton-translocating NADH-quinone oxidoreductase, M subunit n=5 Tax=Dehalococcoides RepID=Q3Z7Z2_DEHE1 Length = 497 Score = 347 bits (890), Expect = 8e-94, Method: Composition-based stats. Identities = 178/503 (35%), Positives = 272/503 (54%), Gaps = 18/503 (3%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L + +P G L R + + +L+ + L LSL ++ S + + I Sbjct: 6 LTLITFLPAAGAILMALWPRLSGRAIKISSLLLTLVPLVLSLVVFAGFDRSSSMAGVI-- 63 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMW 122 Q E ++PWI + HL +DGLSL +VLT LLGVLAVL SWK ++ F + L+ Sbjct: 64 -QFEENLPWISLLNANYHLGVDGLSLPFLVLTTLLGVLAVLISWK-VDLRIKEFFVWLLI 121 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 + + GVF+++D+ LFF FWE+ L+PMYFLI++WG + +A K+ +YT G Sbjct: 122 LQTSITGVFVSLDLLLFFIFWELELIPMYFLISIWG-----AGRKEYSALKYVLYTLFGG 176 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 +L IL L F + + + +L N + + L FFI FA+K+P P H Sbjct: 177 AFILAGILILFFAT-GSLDIASLASTDL-NNFLRPAMMVLTFFMFFIGFAIKLPAFPFHT 234 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGA 302 WLPDAH+ APTA SV LAG LLK Y +LR ++ +FP+ ++AP+ + + VI + YGA Sbjct: 235 WLPDAHTDAPTAASVILAGTLLKMGGYAMLRLNVAMFPDVCRDWAPLILTIAVINVIYGA 294 Query: 303 WMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQL 362 + QTDIKRLIAY+SVSHMGFVL+ I+T +++ GAV+QM +HG+ LF + G + Sbjct: 295 AITLKQTDIKRLIAYSSVSHMGFVLLGIFTLGEISMNGAVLQMFSHGIITGLLFAITGVV 354 Query: 363 YERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP--- 419 H RD+ +GGL +M + + + + +P T F+ E + GSFQ Sbjct: 355 MHNTHERDINKLGGLAKQMPRTAIIFILAGLGAMAVPATSGFIAEVSVFLGSFQSSVVPG 414 Query: 420 --VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVL 477 V T++ GLV A+ Y L + R + G + Q + E+ L+ +V++ Sbjct: 415 GQVFTMLCLLGLVLAAAYILWTVQRVFLGPGLEKF--QMVKDADKTEIVFSLVFLVVMFG 472 Query: 478 LGFYPQPILDTSHSAIGNIQQWF 500 +G YPQ I+D + + + F Sbjct: 473 VGLYPQIIVDVIQTGVAPLAAVF 495 >UniRef50_D2M1W1 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2M1W1_BACS4 Length = 504 Score = 346 bits (889), Expect = 1e-93, Method: Composition-based stats. Identities = 183/507 (36%), Positives = 280/507 (55%), Gaps = 23/507 (4%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L WL+ +P G L + + R IA T L L +SL +W ++ Sbjct: 5 ILTWLVFLPLAGALLILTVPKENKNLVRSIATGTSILALVVSLVVWGMFD----RANPDM 60 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q F + I+ HL +DGLS ++VLT ++ L++ S+ I+ F++ + Sbjct: 61 QMNHFFQWFDLGFLQINYHLGVDGLSAPLLVLTTIVTTLSIFASFT-IQNRVKEFYVWTL 119 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 +L G++GVF+A+DMFLFF F+E+ L+PM+F+IA+WG GK + AA KF +YT Sbjct: 120 VLLTGMLGVFVALDMFLFFLFFELTLIPMFFIIAIWG-----GKAKEYAAFKFLLYTGLG 174 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELL----NTPMSSGVEYLLMLGFFIAFAVKMPV 237 +M I +A+ +V A+G TFN L N +SS V+ L L F+AFAVK+P+ Sbjct: 175 SAIMFITFIAMYYVALQASGYATFNMIVLADIFANVEVSSTVKAGLFLALFVAFAVKLPI 234 Query: 238 VPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 P H WLP+AH +APTA S+ LAG+LLK YGL+R + +FP+ +A FA + LGV+ Sbjct: 235 FPFHTWLPNAHVEAPTAASMILAGVLLKMGGYGLIRIGIGVFPDQAARFATLIALLGVVN 294 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 I YGA +A QTD+KRL+A++S+SHMG VL+ I + ++ QGA+ Q+++HG AA LF Sbjct: 295 IIYGALLALVQTDLKRLVAFSSISHMGIVLLGIASFTESGMQGAIFQLVSHGFIAALLFF 354 Query: 358 LCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSF-- 415 + G +YER TR + +GGL + L L A+A++G+PG FV E + G F Sbjct: 355 MVGAIYERTKTRTISELGGLSKSIPILAGFMLAAAMASVGLPGLSGFVSELLAFIGIFGA 414 Query: 416 -----QVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILL 470 VI G++ + Y L + R FG+ + +EL E ++ Sbjct: 415 DASILPAAAWFGVIGGIGIILTAAYLLWAMQRTTFGQLDDKY--KELKDARPLEYIPMIG 472 Query: 471 LVVLLVLLGFYPQPILDTSHSAIGNIQ 497 L+ +L+G YP + D + + +I Sbjct: 473 LLAFSLLIGVYPNILSDVINITVIDIV 499 >UniRef50_B7K6C0 Proton-translocating NADH-quinone oxidoreductase, chain M n=6 Tax=Chroococcales RepID=B7K6C0_CYAP8 Length = 523 Score = 345 bits (887), Expect = 2e-93, Method: Composition-based stats. Identities = 167/502 (33%), Positives = 264/502 (52%), Gaps = 20/502 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L +L+ +P +G + V +W L T+ + + +WL + L+ S Sbjct: 1 MLSFLLWLPILGAIIIGFFPAKLSSV-QWKRLTTVLAVVVFAATIWLVTQFDLSHSG--- 56 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q PW G+S LAIDGLSL ++ L LL ++A+ S E + ++ + Sbjct: 57 -LQFREYFPWAKPIGLSYSLAIDGLSLPLLALNSLLTIIAI-YSIGENVERPRLYYALTL 114 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 I G+ G +A ++ LF F+E+ L+P Y +IA+WG G+ R A+ KF +YT S Sbjct: 115 LINAGITGALVAQNLLLFVIFYELELIPFYLMIAIWG-----GEKRGYASVKFLLYTALS 169 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 GL++L L + F+ +G F+Y+ + +S + +L+ I F +K+P+VPLH Sbjct: 170 GLLVLAGFLGIGFL----SGATNFDYDTISTQGLSLNTQLILLTALLIGFGIKIPLVPLH 225 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLPDA+++A A ++ L GIL K YGL+RF L LFP A +P +G I + YG Sbjct: 226 TWLPDAYTEASPAVAILLGGILAKLGTYGLIRFGLQLFPQAWHLISPGLAIIGTISVLYG 285 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 A A AQ DIKR++AY+S+ HMG++L+A G+QL+ GAV QMI+HGL A LF L G Sbjct: 286 ALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSILGAVAQMISHGLILALLFHLVGI 345 Query: 362 LYERIHTRDMRMMGGLW---SKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVV 418 + ++ TRD+ ++ GL + AL + +A+ G+PG FV EF++ GSF Sbjct: 346 VERKVGTRDLDVLNGLMNPIRGLPLTSALLVMAGMASAGIPGLVGFVAEFIVFQGSFTTF 405 Query: 419 PVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLL 478 P+ + +VY + +L+R FGK +++A P + E L +L++ L Sbjct: 406 PIPILFCIIASGLTAVYFVILLNRTCFGKLDNKLAYY--PPVLKSESIPAFALTILILFL 463 Query: 479 GFYPQPILDTSHSAIGNIQQWF 500 G P +L + Sbjct: 464 GIQPNWLLRWMEPTTDVLASQI 485 >UniRef50_Q37401 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Allomyces macrogynus RepID=Q37401_ALLMA Length = 482 Score = 344 bits (883), Expect = 5e-93, Method: Composition-based stats. Identities = 168/492 (34%), Positives = 267/492 (54%), Gaps = 15/492 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRW-IALITMGLTLALSLQLWLQGGYSLTQSAGI 60 +L LI++P +G + + E R IALI G+ +S+ LW+Q + Q + Sbjct: 1 MLSTLIILPLVGALIIYLGESSFTNETRLRIALIIAGINFIISIGLWIQFDENTAQFQFV 60 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 + S F + + +DG+SL V+LT L + +L + + + + L Sbjct: 61 EDFGSLFGQGLC-----HLIIGVDGISLFFVILTSFLTIPIIL-TPPYNGESPTAYLITL 114 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + + +I VF+ +D+ LF+ +E +L+PM+ +I +WG K +I AA FF+YT Sbjct: 115 LILESMLIAVFVVLDLLLFYICFETVLIPMFLIIGIWGSKV----RKIMAAYHFFLYTLL 170 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 L ML+ I+ + + T + + L S E LL L FF++FAVK+P+ P+ Sbjct: 171 GSLFMLLGIIVIYYQTG--TTDYQYLLAVLGTAESSLTRENLLWLTFFLSFAVKVPMFPV 228 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 +GWLP AHS+APT GS+ LAGILLK + YG LR+S+PLFPNAS F P + L VIGI Y Sbjct: 229 YGWLPLAHSEAPTGGSMILAGILLKLSGYGFLRYSIPLFPNASNYFTPFVLTLAVIGILY 288 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 + F QTD+K +IAY+S+SHM V+ AI++ + + +GA+ MI+HG+ ++ LF G Sbjct: 289 SIFACFRQTDLKSVIAYSSISHMNIVIAAIFSDNIIGIEGALFMMISHGIVSSALFFCVG 348 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 LY+R TR + GL M + + +PG F+GEF+ G F+ P+ Sbjct: 349 ALYDRTGTRILAYYRGLTMVMPLFSLCFFILILNNMAVPGGIGFIGEFLCFLGIFKTNPI 408 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 I ++++ +V + Y++ + +R FG S ++ RE ++L V L +LLG Sbjct: 409 ICLLASLSIVLGAAYNIFLTNRLLFGSLSKYFKSYN--DLTRREFMILLPFVFLSILLGL 466 Query: 481 YPQPILDTSHSA 492 P IL+ H + Sbjct: 467 CPNIILNAIHQS 478 >UniRef50_Q0BU96 NADH-quinone oxidoreductase chain M n=12 Tax=Acetobacteraceae RepID=Q0BU96_GRABC Length = 510 Score = 341 bits (876), Expect = 4e-92, Method: Composition-based stats. Identities = 175/497 (35%), Positives = 285/497 (57%), Gaps = 22/497 (4%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVK---VPRWIALITMGLTLALSLQLWLQGGYSLTQSA 58 +L L+ +P G FL G+ R IAL +T LSL LW++ S+T Sbjct: 9 ILSILMGLPIFGSFLLLFLRGTGISQAATARGIALGVSLITFLLSLVLWIEFDPSMT--- 65 Query: 59 GIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHL 118 Q E W+P FG+S HL +DG SLL+++LT LL +++L +W+ I + + L Sbjct: 66 ---GLQFEERANWMPGFGVSYHLGVDGFSLLLLLLTTLLTPISILAAWRVIHERVSHYML 122 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 ++ + +IGVF+A D +F+ +E LVP LI LWG G R AA KFF+ T Sbjct: 123 AVLMLQAAMIGVFVAQDFVVFYISYEATLVPGSLLIGLWG-----GPRRAFAAMKFFLLT 177 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 S L+ML+ +L +V + + + LL+T + L+ L F +AF K+P+ Sbjct: 178 FGSSLLMLLVLLYAWYV------TGSTDMDVLLHTRFPMTAQSLIFLAFVLAFGTKLPIW 231 Query: 239 PLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 PLH WLPDA+ +AP + L+G++ K AYGLLRF++ + P+A+ +AP+ M LGV+G+ Sbjct: 232 PLHSWLPDAYGEAPAPATALLSGVMAKAGAYGLLRFAIGMAPDAARHYAPVMMILGVVGV 291 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFIL 358 Y A +A AQTD+K+++AY+S SHMG V++ +++ + GA+ QM++HG+ AGLF Sbjct: 292 IYAAIIACAQTDMKKMVAYSSFSHMGLVVVGLFSLTTEGIDGALFQMVSHGIIIAGLFFC 351 Query: 359 CGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVV 418 + R +RD + G+ + L AL++ F++A++G+PGTG FVGE +++FG+ V Sbjct: 352 VSMVSFRAGSRDFAKVTGVVNYAPRLAALAMAFSMASIGLPGTGGFVGEVLVIFGALHVN 411 Query: 419 PVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLL 478 + +++ +V ++Y L+ R FGK ++ L M+ E+ +++ LVVL + + Sbjct: 412 VWLALLAGTSMVLGAIYMLSFYWRVMFGKLSGAVSV--LHDMTRLEMAVLVPLVVLTLWM 469 Query: 479 GFYPQPILDTSHSAIGN 495 GFYP +++ Sbjct: 470 GFYPTSFTRVFNASAHA 486 >UniRef50_C7PRG9 Proton-translocating NADH-quinone oxidoreductase, chain M n=4 Tax=Sphingobacteriales RepID=C7PRG9_CHIPD Length = 478 Score = 340 bits (873), Expect = 8e-92, Method: Composition-based stats. Identities = 150/500 (30%), Positives = 282/500 (56%), Gaps = 22/500 (4%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 ML LILIP + G + + + G P+ + L+ +LA+++ Q + Sbjct: 1 MLTVLLILIPLVAGLVTFGLKGSG---PKALGLVASLASLAVTVAALFQFRTAPDA---- 53 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 + WIP+ G + +DG+ L++ +LT + +L ++ + + F+ + Sbjct: 54 ----LQLTANWIPQLGAQFSVGLDGMGLMLCLLTAISFLLILIVIYNREYERPNSFYGLM 109 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + G++GVF A D LF+ FWE+ L+P+YFL +LWG G+ RI KFF+YT A Sbjct: 110 LLSQAGLVGVFTAYDALLFYVFWELALIPVYFLCSLWG-----GEKRIPVTFKFFVYTFA 164 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 L+ML+ ++ + Y T +F+Y ++ ++ + L FF+AFA+KMP+ P Sbjct: 165 GSLLMLVGLIYI----YLQTPEHSFSYASFVSGAITPQDQSWLFWLFFVAFAIKMPIFPF 220 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H W PD + Q+PT ++ L+GI++K +G++R+ LP+ P + ++ +A+ L +IGI Y Sbjct: 221 HTWQPDTYEQSPTPVTMVLSGIMVKMGLFGVVRWLLPVLPKGAYMWSDVAIVLSIIGIIY 280 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 + +A Q+DIKRLIAY+S++H+G + AI+T ++ + QG ++QM HG++ GL+I+ Sbjct: 281 ASCIAIVQSDIKRLIAYSSIAHIGLMSAAIFTNNEQSLQGLMVQMFNHGINIIGLWIIVE 340 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 + R+ +++ MGG+ + + ++A + +P T F+GEF++L G FQ Sbjct: 341 IIQNRLKIKNLNEMGGIAQYAPGIAIFLVTISLANIALPLTNGFIGEFLMLSGLFQYNVW 400 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 ++ G++ +VY+L M+ + FG++ ++ + EL +++++V ++++LGF Sbjct: 401 FMAVAGLGIILGAVYTLNMVQKVIFGQSNQ--LTETTTDLKGNELLVLIIIVGIILVLGF 458 Query: 481 YPQPILDTSHSAIGNIQQWF 500 YP+P+L+ S + + + Sbjct: 459 YPKPMLELVSSTTELVNKVY 478 >UniRef50_B7GME2 NADH dehydrogenase subunit M n=6 Tax=Bacillaceae RepID=B7GME2_ANOFW Length = 503 Score = 339 bits (871), Expect = 1e-91, Method: Composition-based stats. Identities = 165/503 (32%), Positives = 268/503 (53%), Gaps = 18/503 (3%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQG--GYSLTQSAGI 60 L LI P +G + + K +W+ ++ +L LSL + Q GY +++ + Sbjct: 6 LSLLIFSPLLGILVLSLFPKEQEKAIKWLGVLATLPSLCLSLFAFWQYRNGYDISKLSEK 65 Query: 61 PQWQSEFDMPWIPR--FGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHL 118 W D P++ F ++ L +DG +L+M+VLT +L LA + S ++++G+F L Sbjct: 66 RSWIQFGDFPFLKETDFTVAYELHVDGFALVMIVLTTILATLAAIASTSIQKEWKGYFQL 125 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 L+ + G++GVF A ++ LFF F+E+ L+PM+FLI WG+ + AA + IY Sbjct: 126 FLL-LEIGMLGVFAASNLVLFFIFFELTLIPMFFLIGKWGYF-----EKEKAAYSYLIYN 179 Query: 179 QASGLVMLIAILALVFVHYNATGV----WTFNYEELLNTPMSSGVEYLLMLGFFIAFAVK 234 V+LI I L + N +P+S + Y L L +AF VK Sbjct: 180 GLGSAVLLIVIAVLFARTGTSNIAELRYILTNSSVQTISPISDDLRYGLFLALLVAFGVK 239 Query: 235 MPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLG 294 +P+VPLH W+ H QAP + + AG+LLK A+GL+R + LFP +F+ + LG Sbjct: 240 LPIVPLHRWMLRVHVQAPPSVVMLHAGVLLKIGAFGLVRLAFGLFPGQFQQFSTWLIVLG 299 Query: 295 VIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAG 354 ++ + YGA++A QTD K ++AY+SVSHMG +LI + + ++ QGA+ Q ++HG AA Sbjct: 300 IVNLLYGAFLALRQTDFKMVLAYSSVSHMGIILIGLGSLNEAGIQGAIFQAVSHGFIAAF 359 Query: 355 LFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGS 414 LF G +YER T + +GG+ M ++ L A+A+LG+PGT FV EFM G+ Sbjct: 360 LFFFVGVMYERTRTTTLARLGGMAKTMPYVSGFMLAGAMASLGLPGTSGFVSEFMAFVGA 419 Query: 415 FQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVL 474 FQ P + I T G++ +VY L + FG+ A + + E + L++L Sbjct: 420 FQAAPWLAAIGTLGIIMTAVYLLRAVLHMTFGQT----AVTNVRDLRGIEWVPAISLLLL 475 Query: 475 LVLLGFYPQPILDTSHSAIGNIQ 497 ++++G YP + + I + Sbjct: 476 IIIIGVYPSILAMPLQTTIETMM 498 >UniRef50_D1BBE0 NADH dehydrogenase subunit M n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BBE0_SANKS Length = 567 Score = 338 bits (868), Expect = 3e-91, Method: Composition-based stats. Identities = 178/550 (32%), Positives = 266/550 (48%), Gaps = 61/550 (11%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L L ++P +G + W ++ R +AL L + L + S + Sbjct: 10 LTLLAVVPLVGAAVVWALPHGSRRLARPVALGFSLLEVVLVVLAVAAFDTSAASTH---- 65 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI------------- 109 Q WIP+ G S L +DG+ LL+V L+ L L + +W+E Sbjct: 66 -QLVETHAWIPQIGASYALGVDGVGLLLVALSVGLVPLVIGAAWREQGVEDAVSTVSTVS 124 Query: 110 -------------------------------EKYQGFFHLNLMWILGGVIGVFLAIDMFL 138 E + ++ + ++ VF A D+FL Sbjct: 125 TEGAAGAAGAAAPARGAGTAKSPAGADDRPGEGRLRHYLALVLVLQTFMVLVFSARDVFL 184 Query: 139 FFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYN 198 F+ +E MLVP+YF+I +G +G R AA KF I++ A GLVML A++ L Sbjct: 185 FYVVFEAMLVPVYFMIGGFG----EGARRRYAAIKFLIFSLAGGLVMLAAVIVLYVQ--G 238 Query: 199 ATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVD 258 G F E L + E LL LGFF+AFA+K P+ P+H WLPDA AP SV Sbjct: 239 PGGEQGFLTENLTGLGLDQTTERLLFLGFFLAFAIKAPMFPVHSWLPDAAEHAPAGTSVL 298 Query: 259 LAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYT 318 L G+L K +G+L LPLFP+AS AP+ + L V+ I YGA +A Q D+ RL+AYT Sbjct: 299 LVGVLDKVGTFGMLTLCLPLFPDASRWAAPVVIVLAVVSIIYGALLALGQDDLMRLVAYT 358 Query: 319 SVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERI---HTRDMRMMG 375 SVSH G +++ I+ +QL+ GA M+ HG+S LF++ G + R +R + +G Sbjct: 359 SVSHFGVIVLGIFAFTQLSVSGASFYMVNHGISTGLLFLVGGFVVRRTVSGRSRRISELG 418 Query: 376 GLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVY 435 GL L + L ++ L +PG FV E M+ G+F PV ++S +V A++Y Sbjct: 419 GLAKVTPVLAGVFLLAGLSALSLPGLSTFVSEIMVFIGAFGRYPVAAIVSAVVVVLAALY 478 Query: 436 SLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTS-HSAIG 494 L R + G + ++A E+ +S RE +++ LVV L++LGF P P LD A Sbjct: 479 VLLTYQRIFTGPVRPELA--EVRDLSARERWVVAPLVVALLVLGFVPGPALDLVGDPAAV 536 Query: 495 NIQQWFVNSV 504 ++Q V V Sbjct: 537 TLEQVGVTDV 546 >UniRef50_B8FRJ8 Proton-translocating NADH-quinone oxidoreductase, chain M n=13 Tax=Clostridia RepID=B8FRJ8_DESHD Length = 519 Score = 338 bits (867), Expect = 3e-91, Method: Composition-based stats. Identities = 159/498 (31%), Positives = 268/498 (53%), Gaps = 15/498 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +LP+ +L P + F+ + K + +A + +L LSL ++ SL Sbjct: 14 ILPFALLAPILAAFIIVFLPKEEGKTIKLVAALGTLTSLLLSLYVFFAYDRSLA------ 67 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q +P IP G+++ +DG+S+ M++LT L+ AV SW IE F + L+ Sbjct: 68 GMQFNLTIPLIPDIGVNLAFGVDGISIPMLLLTNLIAFTAVYSSWN-IENRVKEFFVLLL 126 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 ++ GV+G F+A D+F+FF F+E++++P+Y ++ +WG K A K IY Sbjct: 127 ILIAGVMGTFIARDLFIFFLFYEIVVIPIYIMVIIWGSTKRVTKE--YAGMKLTIYLLLG 184 Query: 182 GLVMLIAILALVFVHYNATGVW----TFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPV 237 ++L+A+++L N TF ++EL + + + F + + Sbjct: 185 SALLLVAMVSLWVNATNQLAAMGQGPTFMFDELARLQYDETFQIICFGLLAVGFGSLISM 244 Query: 238 VPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 P H W PD ++ APTA S+ AG+L K YGL+R L +FP + +AP+ L V+ Sbjct: 245 FPFHSWSPDGYAGAPTAVSMIHAGVLKKIGGYGLIRLGLMVFPLGAKFWAPVIAVLAVVN 304 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 + Y A++A AQ D+K ++ Y+SVSHMG+VLIA+ + + GAV M AHG+ +A F Sbjct: 305 VLYAAFIALAQKDLKYVVGYSSVSHMGYVLIAVAALNITSINGAVAMMFAHGVMSALFFS 364 Query: 358 LCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV 417 + G +YE+ HTR++ +GGL +M L L +A LG+PGT NF+GEF I G+ +V Sbjct: 365 MIGFIYEKTHTRNIAELGGLAHQMPRLAVGFLLAGMAGLGLPGTVNFIGEFTIFIGTVKV 424 Query: 418 VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVL 477 +PV V+ G++F +VYSL ++ FG + + L + EL +++LV ++++ Sbjct: 425 LPVHAVVGIAGIIFTAVYSLRLIANVLFGPRRKEW--DHLKDLRGPELVPLVVLVFVIII 482 Query: 478 LGFYPQPILDTSHSAIGN 495 G +P +L + + + Sbjct: 483 TGVFPNTVLQLIDTGVQS 500 >UniRef50_Q466B7 F420H2 dehydrogenase subunit M n=3 Tax=Methanosarcina RepID=Q466B7_METBF Length = 495 Score = 337 bits (866), Expect = 5e-91, Method: Composition-based stats. Identities = 163/491 (33%), Positives = 261/491 (53%), Gaps = 22/491 (4%) Query: 4 PWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQW 63 LIL+P I + + T+ +A + TL L+L +L + Sbjct: 6 SLLILVPLIFAAVTFFTKTKEQAA--GLAFLGSLATLGLTLYAYLNFD------SSTAAM 57 Query: 64 QSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWI 123 Q + WIP G+ + IDG+S+ +++L ++ +L SWKE + F+ ++ + Sbjct: 58 QFFESIDWIPLLGVKYSVGIDGISMPLILLNAIVIPFLILYSWKEEREDSNRFYGLILTM 117 Query: 124 LGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGL 183 VIGVF+A+D +F+ FWE+ L+P++F++ +WG G+ R A+ KFFIYT + L Sbjct: 118 QAAVIGVFVALDFVVFYIFWELTLIPLFFMVNIWG-----GEKRAHASYKFFIYTHVASL 172 Query: 184 VMLIAILALVFVHYNATGVWTFNYEELLNTPMSSG---VEYLLMLGFFIAFAVKMPVVPL 240 VML+ I L + + TGV TF+ EL+ G + + L F K+P P Sbjct: 173 VMLLGIFGLFYASWQQTGVPTFDIRELVGQFQFLGSGLLRNAIFLSIIFGFLAKLPTFPF 232 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNAS--AEFAPIAMWLGVIGI 298 H WLPDA+++APTAGSV ILLK YGL R SLP+ PN I LG I Sbjct: 233 HSWLPDAYTEAPTAGSVLF--ILLKIGGYGLFRISLPMLPNTGNPELMITILGLLGAFSI 290 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFIL 358 YGA +A Q D+KR+IAY+S+SHMG+VL+ L+ GA+ Q +HGL + +F+ Sbjct: 291 LYGALLALRQKDLKRMIAYSSLSHMGYVLLGSAGFVALSVSGAMFQQFSHGLIMSIMFMS 350 Query: 359 CGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVV 418 G + TR + +GGL KM L L + +A+LG+PG F+ EF++L S+ + Sbjct: 351 AGAIQTSTGTRIINNLGGLAKKMPTLAVLMMLGFMASLGLPGLTGFIAEFLVLAFSYVNL 410 Query: 419 PVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLL 478 P +++ +V + Y L + RA FG ++ ++ ++ ++F + ++ +L+V Sbjct: 411 PGFVLLALLAIVITAGYHLWAMQRAMFGVYNEKLG--DVRDINSLQVFSMAVIALLVVYF 468 Query: 479 GFYPQPILDTS 489 G+ P P+L+ Sbjct: 469 GWNPNPVLNMM 479 >UniRef50_Q1ZRW3 NADH dehydrogenase I, M subunit n=2 Tax=Photobacterium RepID=Q1ZRW3_PHOAS Length = 500 Score = 337 bits (865), Expect = 6e-91, Method: Composition-based stats. Identities = 174/507 (34%), Positives = 277/507 (54%), Gaps = 14/507 (2%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L LI +P + L + R + R + L T+ + L +++ + Sbjct: 1 MLSLLIFLPMVAALLIGSSCRKLPFIARSMTLTTLIIESMLVAWIFITHQ--------VH 52 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 + + WIP FGI +++DG+SL ++ LT L ++A+L +W ++ ++Q F ++ Sbjct: 53 GFSMTESLNWIPDFGIKYLVSMDGISLSLIGLTCTLFIVAMLVAWHQVNRWQA-FGPLML 111 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 L G++G FLA+D+ LF+ FWE+ML+P+YF+++ WG GK AA KF + T Sbjct: 112 LTLSGIMGAFLALDLMLFYVFWELMLIPIYFMLSFWG-----GKDTKQAALKFVLVTITG 166 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 L+ML++++AL ++ N TGVWTF+Y L + P+ + ++ GF IAF +K+P P H Sbjct: 167 SLLMLVSLVALYIINGNNTGVWTFDYFYLASHPIMGELAIPVVCGFLIAFLIKIPGFPFH 226 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 W PD + + A S+ L+G++ AYG+LRF L +FP A + I M LG IG Y Sbjct: 227 FWAPDTYREGAPAVSLLLSGVMANVGAYGILRFCLAIFPEAMHQMMYIGMALGAIGSLYA 286 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 A +AF Q D++ +IAY+S+SHM V++AI+ A GAVIQ+IAHGLS AGLF + Sbjct: 287 ALLAFRQKDLRNVIAYSSISHMNLVVLAIFAWQLQALNGAVIQLIAHGLSVAGLFAVVRM 346 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 L R + MGGL+ + + LF A++G+PG GNF GE ++L GSF V P+ Sbjct: 347 LQARGFSGKFDEMGGLYKVLPGIGVFLLFIVAASVGIPGLGNFAGEILLLAGSFSVSPLW 406 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 T ++ F +V VY L A+ G ++L ++ RE ++V+ L +G Sbjct: 407 TSLAAFSIVLGVVYFLRAYGLAFLGPISDDNEQRKLIDLTAREKLTASIIVIGLFWVGLE 466 Query: 482 PQPILDTSHSAIGNIQQWFVNSVTTTR 508 P +L S+ + S + Sbjct: 467 PNYLLQLMMSSTKTLASIHSGSYSLIE 493 >UniRef50_Q3JBP3 Proton-translocating NADH-quinone oxidoreductase, chain M n=4 Tax=Proteobacteria RepID=Q3JBP3_NITOC Length = 485 Score = 337 bits (865), Expect = 6e-91, Method: Composition-based stats. Identities = 162/499 (32%), Positives = 264/499 (52%), Gaps = 17/499 (3%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L +++ P IG + + R + L L LS L L A P+ Sbjct: 4 LSLILITPVIGALIIAFMPPHKSLLIRRTTVGVSALVLILSFSLLLVFD------ASSPE 57 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMW 122 +Q PW P G LA+DGL+L MV+L LL +A+L S+ ++ +G +++ ++ Sbjct: 58 FQLVELKPWNPELGSHYALAMDGLALPMVLLATLLSFIAILASYNMTDRPKG-YNIAMLV 116 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 + GV+GVF+A D LF+ FWE+ L+PM+FLI WG GK R A+ F +YT Sbjct: 117 LECGVLGVFMAEDWALFYVFWELTLIPMFFLIDQWG-----GKRRQMASLNFVLYTMGGS 171 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 + ML+++L + ++ T + M + L+ LG I F VK+P+ PLHG Sbjct: 172 VFMLVSLLIIY--TSSSEHSTTIAAMTQAASQMPLDKQILVFLGLLIGFGVKVPIFPLHG 229 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGA 302 WLP AH +AP+ S+ L+GILLK AYGL+R ++ + P+A+ P+ L + I YG Sbjct: 230 WLPLAHVEAPSPVSILLSGILLKMGAYGLIR-AIGMLPDAALALQPLLAGLALFSIVYGG 288 Query: 303 WMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQL 362 +A+ Q+D+K +IAY+S+SHMG V++ I ++ + GA +QMIAHGL A LF+L G L Sbjct: 289 LLAWRQSDLKAMIAYSSISHMGIVILGISALNEAGFLGATMQMIAHGLVAGSLFLLIGLL 348 Query: 363 YERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVIT 422 Y+R H+R++ L M + +A++G+PG F E L GSF+ Sbjct: 349 YDRTHSREVADYSSLVQVMPKFALFTTLALLASIGLPGLVGFPAELHALIGSFERWGWWV 408 Query: 423 VISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYP 482 ++ + G+V ++ Y++ + R + G + ++ + L + EL +L ++ LG P Sbjct: 409 LLVSLGVVISAAYAMRTIVRLFTGPVRPEM--RALKDLHGTELASAGVLAFGIIALGLMP 466 Query: 483 QPILDTSHSAIGNIQQWFV 501 L+ + + ++ F Sbjct: 467 ASALELFGAYVISLSAGFP 485 >UniRef50_Q46LV6 Proton-translocating NADH-quinone oxidoreductase, chain M n=22 Tax=cellular organisms RepID=Q46LV6_PROMT Length = 524 Score = 337 bits (864), Expect = 9e-91, Method: Composition-based stats. Identities = 171/511 (33%), Positives = 267/511 (52%), Gaps = 27/511 (5%) Query: 3 LPWLILIPFIGGFLCWQTE---RFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAG 59 L ++L+P +G + +PR IAL+ + + + ++S Sbjct: 25 LSLIVLLPIVGALIMPFLPTQESKNSNLPRNIALVILLADFLIVVLALANLFDPNSES-- 82 Query: 60 IPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLN 119 Q + W+P G+ L +DG+S +VVL+GL+ L+ SWK +++ + Sbjct: 83 ---LQLVERLQWLPSIGLEWSLGVDGISAPLVVLSGLITFLSAAASWK-VKQKTRLYFAL 138 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 L+ VFL+ D LFF WE+ LVP+Y LIA+WG GK ++ AATKF +YT Sbjct: 139 LLIQASAQALVFLSQDFLLFFLAWELELVPVYLLIAIWG-----GKRKLYAATKFILYTA 193 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 + L++LI+ LAL + +TFN E+ + LGF I F VK+P+ P Sbjct: 194 LASLLILISGLALAL----SGDQFTFNLSEIAAKSFTGNFGIFCYLGFLIGFGVKLPIFP 249 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 LH WLPDAH +A S+ LAG+LLK Y L+RF++ + P+ AP + +G++ I Sbjct: 250 LHTWLPDAHGEANAPVSMLLAGVLLKMGGYALIRFNVQILPDTHLILAPALIIIGIVNII 309 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 YGA AFAQ ++KR IA +SVSHMGFVL+ I + L GA++QMI+HGL AA +F + Sbjct: 310 YGALNAFAQDNVKRRIACSSVSHMGFVLVGIGAINALGISGAMLQMISHGLIAAAMFFVT 369 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ--- 416 G YER +T + MGGL + A L ++A+L +PG F+ E + G Sbjct: 370 GSFYERTNTLSIPNMGGLAKALPITFAFFLASSLASLALPGMSGFISEITVFLGITSQEG 429 Query: 417 ----VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLV 472 + +++ GLV +Y L+M R +FG ++ + M REL + L L+ Sbjct: 430 FTSLFRAITILLAAIGLVLTPIYLLSMCRRVFFGPRIPALSI--VKEMDARELSIGLSLL 487 Query: 473 VLLVLLGFYPQPILDTSHSAIGNIQQWFVNS 503 V +++GF+P+ +D + + Q + + Sbjct: 488 VPTLVIGFWPRIAIDLYEVSTNALAQSLITN 518 >UniRef50_B5IL09 NAD(P)H dehydrogenase I, subunit D-2 n=3 Tax=Cyanobacteria RepID=B5IL09_9CHRO Length = 537 Score = 336 bits (863), Expect = 1e-90, Method: Composition-based stats. Identities = 180/509 (35%), Positives = 263/509 (51%), Gaps = 26/509 (5%) Query: 3 LPWLILIPFIGGFLCWQTERFG--VKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 L ++L+P L G + PR +AL T+ + L L L + Q G Sbjct: 33 LSLIVLLPAAMALLMPLLPGDGSDPRWPRTLALGTLLVDLGLMLVCFSQR-----FDGGS 87 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 Q + W+P G+ L DGLS +VVL+GL+ +L+V SW I + + + Sbjct: 88 SGLQLVERVSWVPALGLEWSLGADGLSAPLVVLSGLVTLLSVAASWN-INRKTRLYFALM 146 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + VFL+ D LFF WE+ LVP+Y LIA+WG G+ R AATKF +YT Sbjct: 147 LVQASAQGLVFLSQDFLLFFLAWELELVPVYLLIAIWG-----GQQRQYAATKFILYTAT 201 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 + L++L++ LAL F + ++FN +L L GF I F VK+P+ PL Sbjct: 202 ASLLILVSGLALAF----SGDSFSFNLSDLAARSPGGVFGLLCYAGFLIGFGVKLPMFPL 257 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H WLPDAH +A S+ LAG+LLK Y L+RF++ + P A AP + LG++ I Y Sbjct: 258 HTWLPDAHGEANAPVSMLLAGVLLKMGGYALMRFNVQMLPEAHLTLAPALIVLGIVNIVY 317 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 GA AFAQ ++KR IA +SVSHMGFVL+ I L GA++QMI+HGL AA +F + G Sbjct: 318 GALNAFAQDNVKRRIACSSVSHMGFVLLGIGAIDALGMSGAMLQMISHGLIAAAMFFVTG 377 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ---- 416 YER T + MGGL + A L ++A+L +PG FV E + G Sbjct: 378 VFYERTKTLSIPNMGGLAKALPITFAFFLASSLASLALPGMSGFVSEITVFLGITANDGF 437 Query: 417 ---VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVV 473 + V++ GLV VY L++ R +FG +A + M REL + L L+V Sbjct: 438 TTGFRVITIVLAAIGLVLTPVYLLSLCRRVFFGPRIPALAV--VGDMKPRELLIGLTLLV 495 Query: 474 LLVLLGFYPQPILDTSHSAIGNIQQWFVN 502 +++GF+P+ +D ++ + + Sbjct: 496 PTLVIGFWPRVAIDFYEASTNALASQLAS 524 >UniRef50_A5UXL0 Proton-translocating NADH-quinone oxidoreductase, chain M n=6 Tax=Chloroflexi (class) RepID=A5UXL0_ROSS1 Length = 507 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 155/503 (30%), Positives = 261/503 (51%), Gaps = 18/503 (3%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L + L + + + R + + ++LAL+L ++L Y Q Q Sbjct: 13 LSLIWLSLVAPTLIIALLKPEQKREIRIVGAVFSFISLALTLLVYLAYDYRSPQ-----Q 67 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMW 122 +Q ++PW+P GI+ L +DG+SL M++L GL+ L SW IE+ + L+ Sbjct: 68 FQFLEEVPWLPELGINYILGVDGVSLPMLLLNGLVIFTGALISWN-IEERTREYWALLLL 126 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 + GV GVF+++D+FL F F+E+ ++PMY LI +WG + A K +Y Sbjct: 127 LAAGVYGVFVSLDLFLLFIFYELAVLPMYLLIGIWGST-----RKEYGAMKLTLYLMGGS 181 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSS-GVEYLLMLGFFIAFAVKMPVVPLH 241 + IL +V V+Y+ T + TF+ L + + S V+ + + F+ FAV + P H Sbjct: 182 AFI---ILGMVAVYYSGT-LRTFDMRLLAQSALFSRDVQIVFFVPLFLGFAVLAGMFPFH 237 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 W P H APTA S+ AG+L+K AYG LR ++ +FP ++ + +I YG Sbjct: 238 TWSPTGHVAAPTAVSMLHAGVLMKLGAYGCLRVAMWIFPEGASYWLLPIAIATLINAVYG 297 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG- 360 A +A Q D K +I Y+SVSHMG L+ + + + GAV+QM AHG+ A F + G Sbjct: 298 ASIAMTQRDFKFMIGYSSVSHMGLTLMGLAAANTIGITGAVLQMFAHGVMTALFFAVVGR 357 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 +Y+R HTR +GGL++ M + + + ++++GMPG F EF I G +Q P+ Sbjct: 358 MVYDRTHTRQFPELGGLFNVMPFAAIVFIIAGLSSMGMPGLAGFWAEFNIFMGMWQRFPL 417 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 I V++ + + Y L ++R +FG+ K+ + LPG++ E +L +L++ G Sbjct: 418 IAVLAGISIPITAGYILLAVYRVFFGELKNP-EFRRLPGLTTPEYVAGAILAAVLIVSGI 476 Query: 481 YPQPILDTSHSAIGNIQQWFVNS 503 YP + + +++ I + + Sbjct: 477 YPAYLTEPIEASVRPIAEALARA 499 >UniRef50_C0VVK4 NADH dehydrogenase subunit M n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VVK4_9CORY Length = 521 Score = 335 bits (861), Expect = 2e-90, Method: Composition-based stats. Identities = 157/506 (31%), Positives = 259/506 (51%), Gaps = 25/506 (4%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL ++P + R +A + + LAL++ + Sbjct: 3 LLTTAAMVPLVAALFMTFLR---SGAARVVAFVASLVPLALAIVMVAGFDPG-------A 52 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKY----QGFFH 117 Q ++PWIP G L +DG++L MV+LT +L + +L S E + + F Sbjct: 53 GMQYTVEIPWIPALGAYYALGVDGIALAMVLLTAILTPIVILYSGTEHYRADQMGEHAFL 112 Query: 118 LNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIY 177 ++ I G I VF + D+ LF+ F+E L+PM+FLI +G G+ R AA KF +Y Sbjct: 113 GFVLAIEGLSIFVFSSTDVLLFYLFFEATLIPMFFLIGGFG-----GENRRYAAIKFLLY 167 Query: 178 TQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPV 237 + SGL+ML AI+ + V G TF +L + + V L +GF IAF VK P+ Sbjct: 168 SLGSGLLMLAAIIGVYIV-----GDGTFLLSDLQDADLGGTVGMWLFVGFMIAFIVKAPM 222 Query: 238 VPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 VP H WLPDA G+V + I+ K +G++RF++ LFP A+ F + +WL VI Sbjct: 223 VPFHTWLPDAAENTTPGGAVMMVAIMDKIGTFGMIRFAMCLFPEATEYFRNVMIWLAVIS 282 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 + +GA A AQT++ R +AYTSVSH GF+++ ++ ++ A A + M HGLS A LF+ Sbjct: 283 VIWGALAALAQTNLMRFVAYTSVSHFGFIVLGMFAVNETAVSAASLYMFNHGLSTAMLFL 342 Query: 358 LCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV 417 + G + +R T D+ GG+ L L ++ + +PG FV EF ++ G+F Sbjct: 343 VVGYMIKRRSTADIHAFGGVQKVAPLLGGYLLIALLSAVALPGLAPFVSEFGVIAGTFNG 402 Query: 418 VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVL 477 P I+ +V A+ Y + + G+ ++ + +P ++ E +++ L+VLL++ Sbjct: 403 APWAAGIAAIAMVLAACYIMRVYKTTMTGEPGDEVI-RTMPDLTHPERWVLAPLIVLLIV 461 Query: 478 LGFYPQPILDTSHSAIGNIQQWFVNS 503 G YP+P+ + + A N ++ + Sbjct: 462 FGVYPEPLTNLVNPASVNTVEYLNSK 487 >UniRef50_A1SE39 Proton-translocating NADH-quinone oxidoreductase, chain M n=3 Tax=Propionibacterineae RepID=A1SE39_NOCSJ Length = 509 Score = 333 bits (856), Expect = 7e-90, Method: Composition-based stats. Identities = 165/500 (33%), Positives = 259/500 (51%), Gaps = 17/500 (3%) Query: 3 LPWLILIPFIGGFLCWQTERF-GVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 L L ++P +G + R G +P+ + L+ LTLA+ + + +Q Sbjct: 7 LTALWVLPLVGALVTAFVPRATGSALPKQVGLLFALLTLAVGIAIAVQYDTG-------D 59 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKE-IEKYQGFFHLNL 120 Q WI FG++ L +DGL LL++++T L L ++ +W + ++ F Sbjct: 60 GMQLTETHTWIEAFGVNYALGVDGLGLLLILMTVALVPLVLVATWNDADDRSSAAFVAWA 119 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + + + VF A D+FLF+ +E L+P YFLI +G R AA KF +Y Sbjct: 120 LALESFSLAVFAATDVFLFYMVFEATLIPAYFLIGRFGQAG-----RGRAALKFLMYQLG 174 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 GLV+L +++ L V +A G ++ +L +S+ E L +GF IAFAVK P+ PL Sbjct: 175 GGLVLLASVIGLYVVSADA-GNPSYLLSDLQQLDLSTNTERWLFVGFMIAFAVKAPLFPL 233 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H WL D +A SV L IL K +G+LRF L LFP AS P+ + L ++ I Y Sbjct: 234 HTWLADTTEKATPGTSVLLVCILDKIGTFGMLRFGLGLFPEASQWATPVVVALALVSIVY 293 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 GA +A Q DI RLI TS+SH GF+ + I+ S GA++ M+ HG+ A LF++ G Sbjct: 294 GALVAIGQDDILRLIGLTSLSHFGFITLGIFAFSSQGGSGAILYMVNHGVGTAALFLIAG 353 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 L R T+ + + G+ +K L L L ++TLG+PG FV E ++L +F Sbjct: 354 YLIRRKGTQLISQIAGVETKAPLLAGLFLVAGLSTLGLPGLSQFVSEILVLISAFDYHWW 413 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 + I+ G+V A++Y L + R G A + + ++ REL ++ L+ LV GF Sbjct: 414 VGAIAVTGIVLAAIYVLWLYQRTMTGPATPG--DEAMTDLNRRELVAVVPLIAALVFFGF 471 Query: 481 YPQPILDTSHSAIGNIQQWF 500 +P P+LD S+ + ++ Q Sbjct: 472 FPMPLLDVSNPTVDSLLQHV 491 >UniRef50_B0CBT4 Proton-translocating NAD(P)H-quinone oxidoreductase, chain M n=66 Tax=cellular organisms RepID=B0CBT4_ACAM1 Length = 529 Score = 333 bits (854), Expect = 1e-89, Method: Composition-based stats. Identities = 167/512 (32%), Positives = 276/512 (53%), Gaps = 32/512 (6%) Query: 2 LLPWLILIPFIGGFLCWQTERF--GVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAG 59 +L L+ P G L + K R +AL+ GL ++ + + Sbjct: 1 MLSVLVWFPLFGVLLLALLPKSIDANKYARSVALVVAGLVFVWTVYIAILFNPKQV---- 56 Query: 60 IPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLN 119 Q +PWI G++ HLA+DGLSL ++ L LL +A+ + E+E+ + F++ Sbjct: 57 --TMQFGEFIPWIKAIGLNYHLAVDGLSLPLLGLNSLLTFIAIWSTDPEVERPR-FYYAL 113 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 ++ + V G FLA D+ LFF F+E+ ++P+YFLIA+WG G R AATKF +YT Sbjct: 114 MLLLNSSVAGAFLAQDVLLFFLFYELEIIPLYFLIAIWG-----GARRSYAATKFLLYTA 168 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLN---------TPMSSGVEYLLMLGFFIA 230 SG+V+L L +V++ +G +F YE L + ++ ++ +LM+G + Sbjct: 169 FSGIVLLATFLGIVWL----SGASSFAYEPLRAIIVGASDTPSGLTLKLQLILMVGILLG 224 Query: 231 FAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIA 290 F +K+P PLH WLPDAH +A T SV LAG+LLK YGLLR+ + L P+A P Sbjct: 225 FGIKIPFFPLHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRYGVGLLPDAWVYLGPWL 284 Query: 291 MWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGL 350 + YG A +Q D+K+++AY S++HM F+L+A ++L+ AV QM++HGL Sbjct: 285 AIWAAVSALYGTSCAISQQDMKKVVAYASIAHMAFILLAAAASTELSMIAAVCQMVSHGL 344 Query: 351 SAAGLFILCGQLYERIHTRDMRMMGGLW---SKMKWLPALSLFFAVATLGMPGTGNFVGE 407 +A LF+L G +Y++ +RDM + GL + + ++ + +A+ G+PG F+ E Sbjct: 345 ISALLFLLVGVVYKKTGSRDMFFLRGLLNPERGLPLIGSMMILGVMASAGIPGMVGFISE 404 Query: 408 FMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFM 467 F+ GS+ + PV T++ +VY L M++R +FG+ ++ +P ++ + Sbjct: 405 FLTFRGSYPIFPVQTLVCMIATGLTAVYFLLMINRVFFGRLPDEL--DRIPTVTWSDRLP 462 Query: 468 ILLLVVLLVLLGFYPQPILDTSHSAIGNIQQW 499 +LV L+ LLG P I+ S + I + + Sbjct: 463 AAILVALIFLLGIQPNFIVRWSETQIAALIPY 494 >UniRef50_D2SDG3 Proton-translocating NADH-quinone oxidoreductase, chain M n=8 Tax=Actinomycetales RepID=D2SDG3_9ACTO Length = 544 Score = 332 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 154/462 (33%), Positives = 231/462 (50%), Gaps = 23/462 (4%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 M L +IL+P L R + I + + LAL +W + S + Sbjct: 1 MFLTVVILLPLAVAGLLLVLPRLSGRAVSGIWMAAASVDLALIGWMWWRYEPGEGASGVV 60 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 E D+ WIP H+ +DGLSL ++ LTG+L + + S +E ++ + F Sbjct: 61 DGIAYEVDVRWIPTVDAGYHVGVDGLSLPLLALTGVLFLACAVWSPREEDRPRS-FAALF 119 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 +++ +G F A+D+ LFF F+++ +V MYF+IA WGH +A KFF+YT Sbjct: 120 LFLQTACLGTFAALDLILFFVFFDLTIVGMYFIIAGWGHG-----NARRSALKFFLYTFV 174 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPM---SSGVEYLLMLGFFIAFAVKMPV 237 L +L+ + L TF+ L P S L++L + AVK P+ Sbjct: 175 GSLALLVGFIGLFLGGEER----TFDMVALAQDPPLADSPVAGGLVLLAIGLGLAVKTPL 230 Query: 238 VPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 P H WLPDAH+ AP GS LAG+LLK YG +R ++P+ P A +A + + LGV+ Sbjct: 231 FPFHTWLPDAHTDAPAPGSAILAGVLLKLGTYGFVRIAMPILPEAWQRWAMVIVVLGVVS 290 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGS----------QLAYQGAVIQMIA 347 + +GA++A AQTD+KR+IAYTSV+HMG+VL+ + +A GAV QM++ Sbjct: 291 VLWGAFVALAQTDVKRMIAYTSVNHMGYVLLGLGAAGLVASADQGARTVATVGAVYQMVS 350 Query: 348 HGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGE 407 HGL LF+L G L+ R T D GL A A +LG+PG F+ E Sbjct: 351 HGLLTGALFLLSGVLWSRGRTYDSGRWSGLARPAPVFAASLAVAAFGSLGLPGLSGFIAE 410 Query: 408 FMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAK 449 F + G+ PV TV++ G++ + L L R G + Sbjct: 411 FQVFAGALPAAPVATVLAVVGILVTAGLFLVALQRLLTGPLR 452 >UniRef50_Q9G8V8 NADH-ubiquinone oxidoreductase chain 4 n=8 Tax=Eukaryota RepID=Q9G8V8_RHDSA Length = 483 Score = 332 bits (852), Expect = 2e-89, Method: Composition-based stats. Identities = 168/494 (34%), Positives = 275/494 (55%), Gaps = 17/494 (3%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L +IL +G FL + + A + T +SL L L S + Sbjct: 6 LSLMILFSLVGVFLVIIIPDKNKVLIKKSAFVCSVFTFVISLLLLLFFDSSS------CK 59 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMW 122 +Q + + F ++ + +DG+S+ ++LT L + +L W +K +++ + Sbjct: 60 FQFVEWLELLIFFNFNLFIGVDGISIFFILLTTFLIPICLLVEWFSKKKNIKEYYVCFLL 119 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 I +I VF +D+ +F+ F+E +L+PM+ +I ++G K +I AA +FF+YT Sbjct: 120 INIFLIVVFSVLDILIFYIFFESILIPMFLVIGIFGSKT----RKIKAAYQFFLYTLLGS 175 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 ++ML++I + F + +++ LL+ S + LL L FFI+FA+K+P+ PLH Sbjct: 176 VLMLLSIFLIFFE------AGSTDFQILLSVKFSEKKQLLLWLAFFISFAIKIPMFPLHI 229 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGA 302 WLP+AH +APTAGSV LAG+LLK AYG +RFSL FP AS F P+ L ++ + Y + Sbjct: 230 WLPEAHVEAPTAGSVILAGVLLKMGAYGFVRFSLTFFPIASVFFCPLIFVLSLLAVLYTS 289 Query: 303 WMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQL 362 Q D+K++IAY+SV+HMG V I I++ + +G+ + MI+HG ++ LF+L G L Sbjct: 290 LTTLRQVDLKKIIAYSSVAHMGLVTIGIFSFNLYGLEGSFLMMISHGFVSSALFLLVGML 349 Query: 363 YERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVIT 422 YE+ H+R ++ GG+ M LFF+VA LG PGT +F EF+IL G+FQV + Sbjct: 350 YEKHHSRLIKYYGGIAQIMPLYTFFFLFFSVANLGFPGTSSFCAEFLILLGAFQVNTFVA 409 Query: 423 VISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYP 482 S+ G+VF++ Y L + +R FG+ + S + ++ ++ L + LG YP Sbjct: 410 TFSSLGMVFSAAYCLWLSNRLLFGQLRVYYVSSYC-DLQKKDFAILFPLSFFTLFLGVYP 468 Query: 483 QPILDTSHSAIGNI 496 + LD H++I N+ Sbjct: 469 EIFLDYIHASISNL 482 >UniRef50_A4WT79 Proton-translocating NADH-quinone oxidoreductase, chain M n=10 Tax=Alphaproteobacteria RepID=A4WT79_RHOS5 Length = 486 Score = 332 bits (851), Expect = 3e-89, Method: Composition-based stats. Identities = 204/495 (41%), Positives = 285/495 (57%), Gaps = 21/495 (4%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 M L LIL+PF GG R+G RW+A+ +GL L + + + S G Sbjct: 5 MELTALILLPFFGGIAALFAGRWGRDAERWVAIAALGLALLILISSFF--------SDGD 56 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 +W + W P G+ + LA+DGLS ++V++ LG+++V+ SWK I +Y G + L Sbjct: 57 GRWIAIERYDWAPSLGLQVILAMDGLSGALLVVSLALGIVSVIVSWK-ITEYSGLLNAAL 115 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 +W + GVFL+ D+ +F FFWE+MLVP + LI++WGH R AA KF ++ Sbjct: 116 LWTVAASNGVFLSFDLLVFAFFWELMLVPSFLLISVWGHG-----DREAAALKFLVFNAV 170 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 +GL +L A+ L TF+ E+ + GV+ LL+LGF AF VK+PV PL Sbjct: 171 AGLGLLAAVFYLG----ATGDTVTFDAFEVAERQIPHGVQVLLLLGFAAAFLVKLPVPPL 226 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H WLPDAH+QAPTAGS+ LAG+LLKT AYGL RF LFP A AP + LG G Y Sbjct: 227 HAWLPDAHTQAPTAGSILLAGLLLKTGAYGLFRFPPMLFPEGFATLAPFGLALGAFGSIY 286 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 GA +A QTD KRL+AYTSV+HM VL+ I G + GA ++M+AH SA+ LF+L G Sbjct: 287 GALLACGQTDAKRLVAYTSVAHMSIVLMGICGGVYFSLMGAGVEMVAHAFSASALFLLIG 346 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 LY+R TRD+R +GGL A F A L MPGT NF+GE +++ G FQV + Sbjct: 347 ALYDRTGTRDLRELGGLQQNAPRFAAAFAVFFSAALAMPGTANFLGEALVITGMFQVNWI 406 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 I+ LV + VY+ + R FGK++ ++ L ++LRE+ I+LL V +L G Sbjct: 407 FASITLISLVISVVYATRLFKRVVFGKSRR---TEALEDLTLREMGPIVLLAVATLLFGM 463 Query: 481 YPQPILDTSHSAIGN 495 PQ ++ A+ Sbjct: 464 LPQLLMGALEGAVEA 478 >UniRef50_C1A8Y2 NADH-quinone oxidoreductase chain M n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8Y2_GEMAT Length = 521 Score = 331 bits (850), Expect = 3e-89, Method: Composition-based stats. Identities = 179/519 (34%), Positives = 284/519 (54%), Gaps = 24/519 (4%) Query: 2 LLPWLILIPFIGGFLCWQTER------FGVKVPRWIALITMGLTLALSLQLWLQGGYSLT 55 +LP ++L P + L R G + P + AL+++ L Sbjct: 11 VLPAMLLWPVLAAVLVRIGGRDVSRDDAGNEAPSGGPDARVLTLAALAVEALLAVAVWGV 70 Query: 56 QSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF 115 WQ+ D+PW+ G ++ L +DGLSL MVVLT + LA+L SW + Sbjct: 71 FDVDGRGWQARVDIPWLADLGATLSLGVDGLSLPMVVLTAFVVPLALLGSWNNVRVRTPA 130 Query: 116 FHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFF 175 F L+ + G++GVF+ +D+ F+ WE+ML+P Y L+ +WG + A+ ++ Sbjct: 131 FGALLLLLTSGLVGVFITLDLLAFYLAWELMLIPTYLLVGVWGAAGTS-----RASLRYV 185 Query: 176 IYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKM 235 ++T L+ML+AI+AL +NA G + + + LL +S + + L FF AFAVK Sbjct: 186 LFTLVGSLLMLVAIIAL----WNAGGGTSLHIDHLLQVALSPRAQLWMFLAFFAAFAVKS 241 Query: 236 PVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFA--PIAMWL 293 +VP H WLPDA S APT +V L LK AY +LRF++PLFP A+ ++ + L Sbjct: 242 ALVPFHTWLPDAQSAAPTVAAVTLG---LKVGAYAILRFAIPLFPAAAMDYTVRSTILVL 298 Query: 294 GVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAA 353 VI + YGA +A AQ D KR+I+Y+SVSH+G +++ + + + QGAV+ +++ G++ Sbjct: 299 SVIAVVYGALVAMAQRDFKRVISYSSVSHLGLIMLGSFVLTPQSVQGAVMSIVSSGIATT 358 Query: 354 GLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFG 413 LF+L G L +R T GGL + W + ++T+ +PGT FVGEF++L G Sbjct: 359 ALFLLAGMLEDRRATTAFSAFGGLAKVLPWFSVALIVSMLSTVALPGTIGFVGEFLVLIG 418 Query: 414 SFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVV 473 ++ PV+ VI+T G++FA+VY L + + F K ++ A+ LP +S RE F+++ LV Sbjct: 419 TYAEFPVLAVIATSGVIFAAVYGLRAVQQLLFEKVDTE-ANGALPDLSGRERFVMVTLVA 477 Query: 474 LLVLLGFYPQPIL---DTSHSAIGNIQQWFVNSVTTTRP 509 +V LG P IL D + A+ ++ N+ TT P Sbjct: 478 AMVYLGVAPHAILQRADRASQALIESVRFGPNAPTTLPP 516 >UniRef50_B9XFX2 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=bacterium Ellin514 RepID=B9XFX2_9BACT Length = 518 Score = 330 bits (847), Expect = 8e-89, Method: Composition-based stats. Identities = 160/522 (30%), Positives = 264/522 (50%), Gaps = 40/522 (7%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 L+ + IP IG + + ++ R + L +L L +W+ + Sbjct: 6 LISTITFIPLIGAIMLVGLDAERKRLARCLGLGFSLASLVLVAVMWIHFD------SSAI 59 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q PWIP F + +DGL LLMV+LT L+ +A+L SW+ EK + ++ Sbjct: 60 DLQFVERHPWIPSFSAEYFVGVDGLGLLMVLLTALVTPMAMLSSWRISEKVP-IYFAMML 118 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 ++ G++G F A++ F +F FWE+ LVP +FLI LWG G R AAT+FF+YT Sbjct: 119 FLEAGLLGTFTALNCFHWFLFWELSLVPAFFLIKLWG-----GPNRSAAATQFFVYTMVG 173 Query: 182 GLVMLIAILALVFVHYN------ATGVWTFNYEELLNTPM------SSGVEYLLMLGFFI 229 + ML++ LA+ + A T +LN + S + G F+ Sbjct: 174 SVAMLLSFLAIYLAAHTFDFVQLAEKGHTGELASMLNLNLGVYGLNSRQFPLFIFAGIFL 233 Query: 230 AFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPI 289 FAVK+P++P H WLP +++APT ++ L G + K YG +R +P FP Sbjct: 234 GFAVKVPLIPFHTWLPTTYAEAPTGTTMLLTGAMSKMGVYGFIRILMPFFPEQMRIIMTP 293 Query: 290 AMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQL------------- 336 +WL VI I + A+ AF Q D+K++ AY+S++H+G+ L+ ++ ++ Sbjct: 294 LLWLAVITIVFSAYSAFVQKDLKKVFAYSSINHLGYCLLGVFAFAKFTGSDAHWNLEKAA 353 Query: 337 AYQGAVIQMIAHGLSAAGLFILCGQLYERI-HTRDMRMMGGLWSKMKWLPALSLFFAVAT 395 A G ++QM HGL+A+ LF G L +R RD+ GGL L A+ Sbjct: 354 AMNGVMLQMFNHGLTASILFCFIGFLEQRSGGLRDLDQFGGLRRVAPVFCGLMGISIFAS 413 Query: 396 LGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQ 455 LG+PG F+GEF+I GSF +V T +S GL+ +++ L ++ R + G ++ A Sbjct: 414 LGLPGLNGFIGEFLIFKGSFPIVTWATAMSVIGLLVTAIFLLTIIQRVFNGPLNAKWAG- 472 Query: 456 ELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQ 497 LP ++L+E ++L L++++G YPQ ++ ++ + + Sbjct: 473 -LPDLTLKECLLVLPATALMLVMGIYPQIVIGKINTTVMQMV 513 >UniRef50_C6D5D3 Proton-translocating NADH-quinone oxidoreductase, chain M n=3 Tax=Bacillales RepID=C6D5D3_PAESJ Length = 543 Score = 329 bits (845), Expect = 1e-88, Method: Composition-based stats. Identities = 161/540 (29%), Positives = 274/540 (50%), Gaps = 53/540 (9%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L +++ P IG + + + + A++ + L LSL L+ + G Sbjct: 9 ILSIILVTPLIGLLVVLLLPKHRNRWLQVAAIVATLIPLLLSLWLYA----DYDKHQGGN 64 Query: 62 QWQSEFDMPWIP--------------RFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWK 107 ++ +P + IDGLSL +V+LT L+ +A S Sbjct: 65 TFEETATWVEVPLNKETQASNGVTNYTLSFQYDVGIDGLSLPLVILTTLITAMAAFASVH 124 Query: 108 EIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTR 167 ++++ F+ + + GV+GVF+A D+FLFF F+E+ L+ MYFLI +WG+ R Sbjct: 125 VKKRWKA-FYAWFLLLETGVLGVFMARDLFLFFIFFEITLIAMYFLIGIWGYF-----NR 178 Query: 168 ITAATKFFIYTQASGLVMLIAILALVFVHY------NATGVWTFNYEELLNT-------- 213 AA +F IY +MLIA + LV ++ +++ +Y ++L Sbjct: 179 ERAANQFVIYNGLGSAIMLIAFILLVNTAGFHIDQDTSSFIYSGSYADILRNLSDPSAWV 238 Query: 214 -------------PMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLA 260 MS + ++ L +AF +K+P++P H W+ H++A A + + Sbjct: 239 NLAPDQTGGLNPFHMSETMHTVIFLLLVVAFGIKLPILPFHTWMLKVHNEAHPAIVMIHS 298 Query: 261 GILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSV 320 G+LLK AYGL+RF + LFP + ++A + LG+ + YGA +AF QTD+K ++AY+S+ Sbjct: 299 GVLLKMGAYGLIRFGIVLFPEQAKDWAVVLASLGLANLLYGALIAFRQTDLKLVLAYSSI 358 Query: 321 SHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSK 380 SHMG VL+ + + + QGAV Q+++HGL +A LF++ G LYER T + +GGL Sbjct: 359 SHMGIVLLGLAAFNGIGLQGAVFQLVSHGLISALLFLIVGSLYERTKTTTLSELGGLARS 418 Query: 381 MKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAML 440 M ++ + L +A+LG+PG FVGEF+ L G F P I S G++ +VY L + Sbjct: 419 MPFISGILLAAGLASLGLPGLSGFVGEFLSLLGLFDSQPWIAGFSVIGVILTAVYILRAV 478 Query: 441 HRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWF 500 + FG + + + L E +++L+ ++LLG YP + DT ++ + + Sbjct: 479 LKTTFGPIEERYLG--VKDARLVEALPMIVLLAFILLLGCYPSVLTDTFQYSVEGLFKPL 536 >UniRef50_Q6UVR8 NADH-ubiquinone oxidoreductase chain 4 n=5 Tax=Viridiplantae RepID=Q6UVR8_PSEAK Length = 548 Score = 329 bits (845), Expect = 1e-88, Method: Composition-based stats. Identities = 169/515 (32%), Positives = 257/515 (49%), Gaps = 47/515 (9%) Query: 18 WQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFD--------- 68 + + V R IAL +T LSL LW+ + + Sbjct: 40 FMVPAWQVGFIRLIALNVSLITFLLSLALWVLFDPLTADFQFRSLINFQQEKLDTATTLH 99 Query: 69 ----------MPWIPR---------FGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWK-- 107 + W F S IDG+SL +V+LT L + +L W Sbjct: 100 SLQGLLDNKALDWNNASIFETVGNLFNFSFSFGIDGISLWLVLLTTFLTPICILVGWALP 159 Query: 108 -----EIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKAS 162 + Y + + + I ++ VF D+ +F+ F+E +L+PM+ LI L+G + Sbjct: 160 ASLQIKGPHYLKIYCIIFLIIESLLLVVFCVRDLLVFYIFFEAVLIPMFLLIGLFGSQPR 219 Query: 163 DGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYL 222 + I AA K F+YT A L ML+ IL + F + ++ L + S + + Sbjct: 220 N----IRAAYKMFLYTLAGSLPMLVGILLIYFQC------GSTDWSILSTSYFSPTRQLI 269 Query: 223 LMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNA 282 L FF +FAVK P+VP HGWLP+ HS APTAGS+ LAGILLK YG LR+S+ LFP A Sbjct: 270 LWALFFFSFAVKAPLVPFHGWLPETHSNAPTAGSIVLAGILLKLGTYGFLRWSVTLFPLA 329 Query: 283 SAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAV 342 S FAPI + ++G+ Y + + Q D+K+LIAY+SVSHM L+ ++ + +G++ Sbjct: 330 SVYFAPIVYIICLVGVVYVSLITLRQIDVKKLIAYSSVSHMALCLLGMFAFNVQGLEGSL 389 Query: 343 IQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMP-GT 401 + M+AHG+ + GLF+ G LY+R TR ++ GGL M L L + L +P + Sbjct: 390 LMMVAHGIVSPGLFLCIGILYDRYKTRVIQYYGGLAMTMPILATSMLILIMGNLSLPILS 449 Query: 402 GNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMS 461 +F E +I G F V ++ +I+ +V + YSL + R +FG K+ SQ +S Sbjct: 450 PSFGAELLIFTGVFLVNRLVAIIAISTMVLTAAYSLFLFSRVFFGNLKTVYISQ-FSDVS 508 Query: 462 LRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNI 496 RE F + + L +LLG +P +LDT H +I I Sbjct: 509 RREFFCLFPFLALSLLLGIFPALVLDTCHVSIAYI 543 >UniRef50_Q11VC4 NADH dehydrogenase I chain M n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VC4_CYTH3 Length = 487 Score = 329 bits (844), Expect = 2e-88, Method: Composition-based stats. Identities = 157/504 (31%), Positives = 271/504 (53%), Gaps = 21/504 (4%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 M+ LI P + + + G ++ I +I + AL + ++ Sbjct: 1 MITTLLIFFPLVAALIVFIA---GQRMAPAIGIIATLIEFALGIFAYVNFD-------AA 50 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 W E +PWI I+ + +DG+SL +V+LT L L +L S K + F++ Sbjct: 51 AGWNYEIVLPWISTLNINYAVGMDGISLALVLLTTFLLPLILLASLSGSLKNKKGFYVLA 110 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + + +IGVF + D+FLF+ FWE+ L+P+YF+ LWG + R KFFIYT Sbjct: 111 LIMQSALIGVFTSKDLFLFYIFWELALIPIYFICLLWG-----DENRKFVTFKFFIYTLF 165 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 L+ML AI+ L Y+ V +F E + NT +++ + + F+AF +KMPV PL Sbjct: 166 GSLIMLAAIIYL----YSVAPVKSFAMENIYNTSLTTCEQVWIFAALFLAFGIKMPVFPL 221 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H W P ++ AP AG++ L+GI+LK YG++R+ LP+ P A ++ +AM L +IGI Y Sbjct: 222 HTWQPSTYTSAPVAGTMLLSGIMLKMGIYGVIRWILPVLPTALMDWGWLAMLLAIIGIIY 281 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 + +A Q++ K LIAY S++H+G + ++T S QG + QM+AHG++ G+ + Sbjct: 282 ASIIAIKQSNYKTLIAYVSIAHVGLIAAGLFTNSVEGLQGVIAQMLAHGVNVVGILFVVE 341 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 L R T ++ +GGL ++M + +A++ +P T FVGEF++ G F + P Sbjct: 342 ILLNRTGTLEIAKLGGLRNQMPQFAVFFVVIMMASIALPSTNGFVGEFLLFVGIFNINPY 401 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 + ++ ++ +VY L+ + G+A+S+ + ++L E +++ +V+++ +LG Sbjct: 402 LAAVAGITIILGAVYMLSSYQKIMLGEARSEY--DGVVDLTLLEKSILIPIVIVIFVLGL 459 Query: 481 YPQPILDTSHSAIGNIQQWFVNSV 504 +P ILD + A+ I NS+ Sbjct: 460 FPNLILDLTEPAVNGILHSVHNSI 483 >UniRef50_Q3JBP7 Proton-translocating NADH-quinone oxidoreductase, chain M n=3 Tax=Gammaproteobacteria RepID=Q3JBP7_NITOC Length = 512 Score = 328 bits (843), Expect = 2e-88, Method: Composition-based stats. Identities = 148/446 (33%), Positives = 243/446 (54%), Gaps = 12/446 (2%) Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMW 122 Q WIP I L +DGLS+L V LT L+ V +L S + I+ + L++ Sbjct: 44 MQFVEQHSWIPTLNIDYLLGVDGLSVLFVPLTALITVAVILASRRSIKTLSSLYFALLLF 103 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 + G IGV+ +D+ LFF FWE+ L P++FLI+LWG G R AA K+ ++ G Sbjct: 104 LEGITIGVYCTLDLALFFLFWELTLPPLFFLISLWG----IGVHRRYAALKYVLFMLTGG 159 Query: 183 LVMLIAILALVFVHYNATGV-----WTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPV 237 +++L + L H N TG+ +FNY ELL TP+ + ++ L F FA+K P+ Sbjct: 160 ILLLFGFILLGLNHANETGIAAPAGLSFNYMELLQTPIPLATQSIVFLLLFFGFAIKAPL 219 Query: 238 VPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 P H WLP + P + + + G LK +G++RF++PL P A++++ + M LG IG Sbjct: 220 FPFHVWLPTMAMEGPASITAIIVG--LKLGLFGIIRFAIPLAPQAASQYFVLMMLLGAIG 277 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 YGA +A QT+++R++AY+S+SH GFVLI + QGAV Q+ G+ A+G+F+ Sbjct: 278 AIYGALIALKQTNLRRMLAYSSISHAGFVLIGAAAFNIQGIQGAVFQLFNFGIVASGIFL 337 Query: 358 LCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV 417 + G L R+ + ++ +GG M L +L +A++G+PGT F E +I+ G+F+ Sbjct: 338 IAGFLQYRLGSTELTALGGAARPMPILASLFFILGLASIGVPGTNGFAAEHLIVIGAFKA 397 Query: 418 VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVL 477 + + G++ ++ Y L +A+ G ++ +E + RE ++ +V L +L Sbjct: 398 HIGMGLAVLLGIILSAAYYLVFYQKAFLGPV-TRATVKETVDLRSREYWIAGTMVSLALL 456 Query: 478 LGFYPQPILDTSHSAIGNIQQWFVNS 503 LG +PQ IL T+ + + Sbjct: 457 LGLFPQQILTTTDKTLQAWVARVETA 482 >UniRef50_Q5FHA2 NADH-quinone oxidoreductase chain M n=11 Tax=Rickettsiales RepID=Q5FHA2_EHRRG Length = 486 Score = 328 bits (843), Expect = 2e-88, Method: Composition-based stats. Identities = 166/487 (34%), Positives = 274/487 (56%), Gaps = 24/487 (4%) Query: 2 LLPWLILIPFIGGFLCWQTE-RFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 +L ++IL+P +G L + + + I+LI+ G T L+ + ++ YS Sbjct: 1 MLLFMILLPILGSCLLTINNFKTTSVLIKVISLISSGATFILNFIIAIKFDYSYK----- 55 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQ-GFFHLN 119 +I + +DGLSL +++LT L +L + S ++ Y F Sbjct: 56 -------GYQFICNLLHGFSIGVDGLSLPLILLTSFLFLLCTVFSLFNMKIYNLRTFIAL 108 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 L+ + G IGVF ++D+ +F+ F+E +L+PM+F+I +WGH+ RI A K F+YT Sbjct: 109 LLLLEGLTIGVFASLDIIMFYIFFESVLIPMFFIIGIWGHE-----DRIYATFKLFLYTL 163 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 A L+ LIAI+ + + + +Y +L ++ + L FFI+FA+K+P+VP Sbjct: 164 AGSLLFLIAIIYIYLFSDKVSNIEQLSY--ILPNFLNIKAQKWLWCAFFISFAIKIPIVP 221 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 H WLP+AH QAPT GSV LAGIL+K Y LLRFS+P+ P A+ F+ + L +IG+ Sbjct: 222 FHTWLPNAHVQAPTVGSVLLAGILIKVGTYALLRFSIPMLPEANMYFSNFVIILSIIGVI 281 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 Y + ++F Q++IK+ IAY+S++HMGFV I++ ++ GA+ QMI+HGL +A LF Sbjct: 282 YASLISFVQSNIKKFIAYSSIAHMGFVTAGIFSFNEYGISGAIFQMISHGLISAALFFCV 341 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP 419 G LY+R HT ++ GL M + +FF +A++ +PGT FVGEF+ + G F Sbjct: 342 GMLYDRNHTLEISKYSGLAKVMPKFSIMFIFFTMASIALPGTSGFVGEFLSILGVFHYSK 401 Query: 420 VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLG 479 + + G++ +VY L + +G + S + + ++ ELF++++L L+++ G Sbjct: 402 LFAALIATGVILGAVYMLFLSKEIIWGASNSSLI---VCDLNKNELFILIILATLVLVFG 458 Query: 480 FYPQPIL 486 YP IL Sbjct: 459 IYPYYIL 465 >UniRef50_Q3A816 NADH dehydrogenase I chain M n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A816_PELCD Length = 491 Score = 328 bits (843), Expect = 2e-88, Method: Composition-based stats. Identities = 176/475 (37%), Positives = 270/475 (56%), Gaps = 16/475 (3%) Query: 29 RWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSL 88 R A+IT+ L ++L + G + +W D PWI R+G L +DGLSL Sbjct: 29 RRAAVITVLLEAGVALSFFSGG------TLPSQRWIRFEDWPWIERYGARFSLGLDGLSL 82 Query: 89 LMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLV 148 LMV LT +L +A+ SW+ Q ++ L+ G++GVFLA D+ LF+ WE+ML+ Sbjct: 83 LMVWLTLILLAVAIGISWQ--RYRQAGYYALLLTGGTGILGVFLAQDLLLFYLCWEVMLL 140 Query: 149 PMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYE 208 P+ I LWG G R+ AA K ++T A L+ML+A L L +H TG ++F + Sbjct: 141 PLVLCIFLWG-----GAQRVQAAFKLLVFTLAGSLLMLLAFLTLYILHGRQTGDYSFALQ 195 Query: 209 ELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAA 268 L T + S + L +AF VK+PVVP+HGWLPDA+ +APTA ++ L+G+L K Sbjct: 196 TLTATVVPSAIAPWLFGCLAVAFLVKVPVVPVHGWLPDAYQEAPTAVTLLLSGVLAKAGI 255 Query: 269 YGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLI 328 +GLLR ++PL P FAP+ LG++ I YG W+AF QTD+KRL+AY SV+H+GF+++ Sbjct: 256 FGLLRVAMPLLPATWQSFAPVLAILGLLSIGYGGWLAFVQTDLKRLVAYASVAHLGFIVV 315 Query: 329 AIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALS 388 + G+ +A QG+++Q+ HG++ A LF+L + R +R + +GGLW++ L A+ Sbjct: 316 GMAAGNAIALQGSLLQLFNHGVTTAALFVLVALVKRRTTSRQLPDLGGLWARTPQLGAMF 375 Query: 389 LFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKA 448 L F++ATLG+PG F GE +IL G+F+ + G++ A+ Y+L M+ +G Sbjct: 376 LLFSLATLGLPGLNIFTGEVLILLGAFRAQAWWGAVGMAGVLLAACYTLRMVQGVLWGVP 435 Query: 449 KSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNS 503 + +P M E+ ++ L VL+ G YP P L + I Sbjct: 436 R---GPDPMPDMKRGEMALLAPLAVLVFWFGLYPLPFLKLLSGPVEQILVQLATK 487 >UniRef50_C2KMP1 NADH dehydrogenase (Quinone) n=4 Tax=Actinomycetaceae RepID=C2KMP1_9ACTO Length = 544 Score = 328 bits (842), Expect = 3e-88, Method: Composition-based stats. Identities = 166/502 (33%), Positives = 264/502 (52%), Gaps = 14/502 (2%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L L+ P + + W + + R IAL + LA L A P Sbjct: 19 LTLLVAWPLVFALVLWLVKPLRP-LGREIALAVSLVELAGVLVAAATS----YNPAAAPA 73 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF--FHLNL 120 +Q PWIP G+S L ++GL L+M++L L L +L SW+E + + + Sbjct: 74 FQLGESYPWIPAIGLSWALGVNGLGLVMIILATALTPLVILSSWREDQDADARAGYAGLI 133 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + + ++ +F A D+ LF+ +E MLVP+YFL+ +GH + R AA KF +Y+ A Sbjct: 134 LGLEACMVLIFTARDLLLFYLTFEAMLVPLYFLVGRFGH--GEAARRRHAAIKFVLYSLA 191 Query: 181 SGLVMLIAILALVFVHYNATGV--WTFNYEELLNTPM-SSGVEYLLMLGFFIAFAVKMPV 237 GLVML ++A+ T F+ + L + S+ + Y M F +AFA+K P+ Sbjct: 192 GGLVMLFGVIAVYVGAAPVTKSPAGLFHMDNLTALDLGSNPLAYFTMWTFLLAFAIKAPM 251 Query: 238 VPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 VP+H WLP + A SV L G+L K +G++ F LFP ASA AP+ + L VI Sbjct: 252 VPVHTWLPTTAAVARGGTSVLLVGVLDKVGTWGMIMFCWQLFPAASAAVAPLVIVLAVIS 311 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 I +GA A A D+ RL+++TS+SH GF+++A+Y GSQ A +GA++ M+AHG+S AG+F+ Sbjct: 312 ILWGALAAIASKDLMRLVSFTSISHFGFMVMALYIGSQTAIEGAMLYMVAHGVSIAGMFL 371 Query: 358 LCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV 417 L G L ER T+++ G L L L +A +G+PG F+ E++IL G+F+V Sbjct: 372 LSGWLTERGGTQEIAAYSGFQRVTPTLAGLFLTSGLAAIGLPGLSGFLPEYLILVGTFKV 431 Query: 418 VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVL 477 + + G+V A+VY L + G +++ + P + RE +++ +++ ++ Sbjct: 432 SLAAALFAVLGVVLAAVYLLLPYQNLFTGPTDARV--RTAPDLGSREKLIMVPVILAMLG 489 Query: 478 LGFYPQPILDTSHSAIGNIQQW 499 LGF P P LD + Sbjct: 490 LGFLPGPTLDLMKPDAAEMYAV 511 >UniRef50_C6X103 NADH-ubiquinone oxidoreductase chain M n=2 Tax=Flavobacteriaceae RepID=C6X103_FLAB3 Length = 497 Score = 327 bits (840), Expect = 5e-88, Method: Composition-based stats. Identities = 151/486 (31%), Positives = 262/486 (53%), Gaps = 24/486 (4%) Query: 27 VPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGL 86 +++AL + L+L + + T Q E + PW ++H IDG+ Sbjct: 26 ASKFLALGFAFAQMFLTLYMLAGLDFKPTVDGV---LQYEINYPWSQFIRSNLHFGIDGM 82 Query: 87 SLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMM 146 S+LM++LT +L L +L S+ E Y+ F+ ++ + G+IG+F A+D LF+ FWE+ Sbjct: 83 SMLMLLLTNILTPLIILSSFNEKPGYRNTFYGLILLMQFGLIGIFTALDGLLFYIFWEVT 142 Query: 147 LVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFN 206 L+P++ + +WG + +I T+FF+YT L ML+ ++ + T +F Sbjct: 143 LIPIWLIAGIWGQEN----KKIEFTTRFFVYTFVGSLFMLLGLIFVY------TNSASFA 192 Query: 207 YEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKT 266 +L N +++ + ++ F AFAVK+PV P H W D ++ +PT G++ L+GI+LK Sbjct: 193 LTDLYNAQLNTTEQTVVFWFIFFAFAVKLPVFPFHSWQADTYTYSPTQGTMLLSGIMLKM 252 Query: 267 AAYGLLRFSLPLFPNASAEFA-PIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGF 325 A YGLLR+ LP+ P+ + I + L ++GI +GA +A A D KR++AY+S+SH+G Sbjct: 253 AVYGLLRYLLPITPDPVLGISGQIVLVLAIVGIVHGALIAIAHNDTKRILAYSSLSHVGL 312 Query: 326 VLIAI---------YTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGG 376 ++ I + S +GA++Q AHG++ GLF LY+R TRD+R MGG Sbjct: 313 MVAGIMASAIVTMKGSLSTQGGEGAMVQAFAHGINIVGLFYCADILYKRFKTRDIRQMGG 372 Query: 377 LWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYS 436 L L + + ++G+P T F+GEF+++ F + V++ ++F++VY Sbjct: 373 LAKVAPKFAVLFMIILLGSIGLPLTNGFIGEFILIKSIFDYNKLAAVVAGLTMIFSAVYL 432 Query: 437 LAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNI 496 M +A FG+ ++ S +S E ++ L ++L G +PQP++D S++ I Sbjct: 433 FRMYGKAMFGEGDERVLS-SAEDLSGIEFSVLATLAGFVILFGVFPQPLIDMVSSSLKFI 491 Query: 497 QQWFVN 502 +N Sbjct: 492 YASMLN 497 >UniRef50_C5C0R5 Proton-translocating NADH-quinone oxidoreductase, chain M n=3 Tax=Actinomycetales RepID=C5C0R5_BEUC1 Length = 507 Score = 327 bits (840), Expect = 5e-88, Method: Composition-based stats. Identities = 166/479 (34%), Positives = 248/479 (51%), Gaps = 25/479 (5%) Query: 26 KVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDG 85 + R I L+ L ++ + Q + A Q WIP G S + + G Sbjct: 29 RASRIIGLVVSVAVLGGAIAMATQF-----EVADAAVPQFTETHSWIPAIGASYAVGLTG 83 Query: 86 LSLLMVVLTGLLGVLAVLCSWKEIE-------------KYQGFFHLNLMWILGGVIGVFL 132 L LLMV+L L L + W + + Q ++ + +I VF Sbjct: 84 LGLLMVLLATFLVPLVLAAGWNDARDDAVGAPGSRAALRRQAGMVALVLALEAMMIAVFA 143 Query: 133 AIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILAL 192 A D+FLF+ +E ML+P+YFLI L+G G R AA KF +Y+ A GL+ML ++A+ Sbjct: 144 AQDVFLFYVLFEAMLLPVYFLIGLYG-----GPARRAAAVKFLLYSLAGGLIMLAGVIAV 198 Query: 193 VFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAP 252 F G F L ++ L FFIAFAVK P+ P+H WLPDA +QAP Sbjct: 199 YFQ--GPGGPDGFLIANLSGVVADPVLQRWLFAAFFIAFAVKAPMWPVHTWLPDAAAQAP 256 Query: 253 TAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIK 312 S L G+L K +G++ LPLFP ASA AP + L ++ I YG +A Q D+ Sbjct: 257 AGTSTLLVGVLDKVGTFGMIALCLPLFPEASAWAAPAIIVLALVSIIYGGLVAIGQQDLM 316 Query: 313 RLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMR 372 R +A+TSVSH GF+++ IY GS +A GA++ M+AHG+S AGLF++ G L +R +R + Sbjct: 317 RFVAFTSVSHFGFIVLGIYVGSSVALTGAMLYMLAHGISTAGLFLVSGFLTDRGKSRRID 376 Query: 373 MMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFA 432 GGL + + L +A++ +PG FV E+++L GSF V V++T G++ A Sbjct: 377 DYGGLQKVTPVIAGIFLVSGLASIALPGLSGFVPEYLVLLGSFDASAVAGVVATAGVIIA 436 Query: 433 SVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHS 491 ++Y L R + G LP + RE ++++ +V +++LGFYP P LD Sbjct: 437 AIYVLLTYQRIFTGPPPGDGPLASLPDLGGRERWVMVPIVAAMLVLGFYPAPALDVLTP 495 >UniRef50_Q11RU7 NADH:ubiquinone oxidoreductase chain M n=4 Tax=Flexibacteraceae RepID=Q11RU7_CYTH3 Length = 564 Score = 326 bits (837), Expect = 1e-87, Method: Composition-based stats. Identities = 171/537 (31%), Positives = 265/537 (49%), Gaps = 69/537 (12%) Query: 29 RWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPW-------IPRFGISIHL 81 RWI++ L L LS+ L++ Q W + ++ L Sbjct: 32 RWISVAVTALQLCLSIYLFVAFKPEYFQFHSYDSLVYMEKANWFQLRLGNLGVLSVNYFL 91 Query: 82 AIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFF 141 IDGLSL M++L+G++ + SW ++ +G +H + + + G FLA+D+FLFF Sbjct: 92 GIDGLSLSMILLSGIVLLTGACASWNITKQAKG-YHALYLLLCISIPGCFLALDLFLFFL 150 Query: 142 FWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYN--- 198 F+E ML+PM+FLI +WG G R A+ KFF+YT +++LI + L+ Y+ Sbjct: 151 FFEFMLLPMFFLIGIWG-----GVRREYASIKFFLYTLLGSILILIVFIVLLISTYHPAE 205 Query: 199 --------------------ATGVWTFNYEELLNTPM----------------------- 215 +G T N+ + + + Sbjct: 206 MIEHLADNSGYTIQHIHEGIHSGELTNNFPVVHSLDLIQLSNPVNYFPNGLLGVHNTLTI 265 Query: 216 -SSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRF 274 + + F +K+P P H WLPDAH +APTA SV LAGILLK YGL+R Sbjct: 266 CGYSIRAWCFAALLVGFLIKLPAFPFHTWLPDAHVEAPTAVSVVLAGILLKIGGYGLMRI 325 Query: 275 SLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGS 334 + PLFP +A+ + +GVI I Y A +A AQTD+K++IAY+SVSHMGFVL+ + + Sbjct: 326 AWPLFPQEAADASWWVGLIGVITILYAALVALAQTDLKKMIAYSSVSHMGFVLLGLAAAT 385 Query: 335 QLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVA 394 GAV QM +HG+ +A LF+L G LY+R H R + GL SKM + A Sbjct: 386 TEGITGAVYQMFSHGIISALLFLLVGVLYDRTHDRMIPNYRGLISKMPAYSVVVTIAFFA 445 Query: 395 TLGMPGTGNFVGEFMILFGSFQVVP-------VITVISTFGLVFASVYSLAMLHRAYFGK 447 +LG+PG F+ E +I G+FQ + +++T GL+ ++ Y L L R +FGK Sbjct: 446 SLGLPGMSGFIAEILIFIGAFQAKSITATIPQWMPLVATLGLLLSAAYYLWTLQRMFFGK 505 Query: 448 AKSQ--IASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVN 502 + I L +++ E ++ L L++L G +P +LD +++ +F+N Sbjct: 506 FSTHMNIDRNTLTDITVYEKALLYTLCGLIILFGLFPAVLLDKIGASMAAWTAFFIN 562 >UniRef50_B9W1R4 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Glomus intraradices RepID=B9W1R4_GLOIN Length = 499 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 153/501 (30%), Positives = 263/501 (52%), Gaps = 27/501 (5%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L L+LIP IG + + R +AL+ ALSL LW + + + + Sbjct: 1 MLTVLLLIPLIG-VIGIILGCSNERQSRQVALLVSLANFALSLVLWGEYDGNCSHFQFVQ 59 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQG------F 115 W S + +DG+SL V+LT + +L + G Sbjct: 60 DWSSVTFC--------HFIIGLDGISLFFVLLTTFIIPTCILGTPNLTSNQSGNISAVKS 111 Query: 116 FHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFF 175 F ++L+ I +I +F+ +D+ LF+ +E +L+P++ +I +W H + ++ A+ F Sbjct: 112 FLISLLVIETLLIALFVVLDLLLFYICFESVLIPLFLMIGIWSH----SQHKVRASFMLF 167 Query: 176 IYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKM 235 +YT L ML++ +AL + + +Y+ + + + ++ +L LG F+A A+K Sbjct: 168 LYTLFGSLFMLLSFIALY------MSIGSTDYQLIATSCIQPEIQKILWLGIFLALAIKT 221 Query: 236 PVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGV 295 P+VP H WLP AH++AP AGS+ LAG++LK A YG LR LPLFP AS+ + P+ L Sbjct: 222 PLVPFHIWLPLAHTEAPLAGSMLLAGVILKMATYGYLRILLPLFPEASSYYTPLVYTLCT 281 Query: 296 IGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGL 355 I I Y + Q ++K +IAY S+SHM + +++ + +G+++ +AHGL++ L Sbjct: 282 ISIIYTSLSTLRQINLKSIIAYASISHMAIATMGVFSNNVQGIEGSILLSVAHGLASPAL 341 Query: 356 FILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSF 415 FI G LY+R HT + GL S M L F +A + +P T NF+GEF+ G++ Sbjct: 342 FISVGVLYDRWHTLILPYYRGLTSTMPLFSLLFFIFCLANMAVPLTANFLGEFLSFAGAY 401 Query: 416 QVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLL 475 Q P IT++++ +V + Y++ +R G + +S RE F++L ++L+ Sbjct: 402 QRNPFITILASSSVVLTAAYTIWTYNRVCLGSPSRYL--YPCLDISRREFFLLLPFLLLI 459 Query: 476 VLLGFYPQPILDTSHSAIGNI 496 +LG P ILD+ H ++ ++ Sbjct: 460 FVLGIVPFVILDSLHFSVSSL 480 >UniRef50_A8ERK4 NADH-quinone oxidoreductase, M subunit n=1 Tax=Arcobacter butzleri RM4018 RepID=A8ERK4_ARCB4 Length = 495 Score = 325 bits (835), Expect = 2e-87, Method: Composition-based stats. Identities = 146/501 (29%), Positives = 262/501 (52%), Gaps = 17/501 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L ++I +P + F T R V R IA +T + L L L+++++ + T Sbjct: 5 ILSFIIFLPAVVAFGLMITTR-DVNAIRNIAFLTTTVILGLVLKIYIEFDPNST------ 57 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q ++ WI +GI+ ++ +DG SL ++++ +L + L W E + +N++ Sbjct: 58 -MQFVTNVSWIETYGINYYVGLDGFSLTILMMIAILIPTSYLLLW---EGKTKGYWINML 113 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + GV G L++D+ LF+FFWE+ML+P++ LI +G ++ K +YT A Sbjct: 114 LVQTGVTGSLLSLDVVLFYFFWEVMLLPVFLLIGQYGFG-----NKVFTTIKVTVYTMAG 168 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLN-TPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 L+MLIAIL L +Y+ G W+F Y++L+ + + + L L F AFA+K+P+ PL Sbjct: 169 SLLMLIAILYLGVAYYSEFGTWSFAYDKLMTISTLDYSTKAWLFLAFLAAFAIKIPIFPL 228 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H W+ + + APT L+ I+ K Y ++RF +P+FP+ EF+ + +G+ G+ Y Sbjct: 229 HTWIMETYKNAPTGAVFLLSSIMAKLGVYAIVRFMIPIFPDIYVEFSTWFVAIGLFGLIY 288 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 A Q DIKR+ AY+S SH+ F+ I++ + GA+ +IAH ++ LF+L G Sbjct: 289 FGIAALMQDDIKRMFAYSSASHLSFISAGIFSLNAYGINGALYLIIAHAIATGALFLLVG 348 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 + E+ + ++ +GG+ K + A +G+PGT FV E +I+FG ++ Sbjct: 349 LMQEQTGFKTIKDLGGIAKKAPIFTFIFAVMLFANVGLPGTNGFVSELLIIFGIYEFNAY 408 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 + IS ++ + Y L M RA + + ++E+ + V+L+ ++GF Sbjct: 409 LGYISALTVIIGASYMLWMFQRAILQDRPEGAPELTMRDLKIKEIIGLAPWVILVFVMGF 468 Query: 481 YPQPILDTSHSAIGNIQQWFV 501 YP+ +D + + Q + Sbjct: 469 YPEIFMDKFEPTVTHYLQDIL 489 >UniRef50_B9XHI7 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=bacterium Ellin514 RepID=B9XHI7_9BACT Length = 514 Score = 325 bits (835), Expect = 2e-87, Method: Composition-based stats. Identities = 145/496 (29%), Positives = 251/496 (50%), Gaps = 9/496 (1%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L +IL P I + R V R +A++ +T+ L+++++ Q ++ +G Sbjct: 4 LTSIILCPLIAALVLCFVPRNYRFVMRIVAMVATFVTMILAIKMFWQYDNAVIGESGT-- 61 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMW 122 ++ E +PW+ G++ H+ +DG+++ ++++ ++ A SW +I F++ L+ Sbjct: 62 YKFEQLIPWVKSLGLNYHVGVDGINVGLILMGAIVAFAAACVSW-DINSRDKEFYILLLV 120 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 + GG++G F ++D+F+F+FF E+ LVP + +I +WG G+ + A + +Y Sbjct: 121 MTGGILGAFASLDIFMFYFFHELALVPTFIMIGVWG----RGENKNYATFQITLYLSIGA 176 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 L+ L+ ++AL T + + P+S + + F + + + P H Sbjct: 177 LISLVGLIALYVKSGANTFDIVALTTYVKDHPISLHDQNFIFPLLLFGFGILISLWPFHT 236 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGA 302 W P + APTA ++ AG+L K YGL+R +LPL P A+ + + WL + IFY Sbjct: 237 WAPLGYGSAPTATAMLHAGVLKKFGLYGLIRIALPLLPQATHSWINVIAWLCLGNIFYCG 296 Query: 303 WMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQL 362 +A Q + LI Y+SV+HMGFV + I + + + GAV+ MIAHG AA F L G L Sbjct: 297 LVAMRQKNFNWLIGYSSVAHMGFVFLGIASLNLIGITGAVLVMIAHGFLAALSFGLSGYL 356 Query: 363 YERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVIT 422 Y T +M MGGL K+ +L + A G+PG NF GE I FG+++ P+IT Sbjct: 357 YHITGTLEMDKMGGLLRKLPFLGTALMMALFAGCGLPGFANFAGEVTIFFGAYKTYPLIT 416 Query: 423 VISTFG-LVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 I+ +G V +VY L + G + R L+L+V L++ GF+ Sbjct: 417 GIAVWGASVIGAVYMLRAIRNMLHGVVPEKFMGVAESAFPHR-KVPYLILLVSLLVFGFF 475 Query: 482 PQPILDTSHSAIGNIQ 497 P+ + + + I Sbjct: 476 PRLLTEKIEPSAKRIV 491 >UniRef50_A6L163 NADH dehydrogenase I chain M n=18 Tax=Bacteroidetes RepID=A6L163_BACV8 Length = 493 Score = 324 bits (831), Expect = 5e-87, Method: Composition-based stats. Identities = 149/505 (29%), Positives = 247/505 (48%), Gaps = 18/505 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L + I++P + W + R + ++ + LALS+ L + L Q+ Sbjct: 3 ILSFFIIVPLLMLASLWASRSVNQ--VRGVMVVGSSILLALSVYLTIDY-IELRQAGATG 59 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 + W I + +DG+S+ M++L+ ++ SWK ++ + + Sbjct: 60 EMLFTASTVWYAPLHICYSVGVDGISVAMLLLSSIIVFTGTFASWK-LQPLTKEYFMWFT 118 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + GV G F++ D+F F F+E+ L+PMY LI +WG + AA K + Sbjct: 119 LLSVGVFGFFVSTDLFTMFMFYEVALIPMYLLIGVWGSG-----RKEYAAMKLTLMLMGG 173 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 +LI IL + + G T N E+ + ++ + F+ F V + P H Sbjct: 174 SAFLLIGILGIFYG----AGGETMNLLEIAKLHIPHEMQRIFFPLIFLGFGVLGALFPFH 229 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 W PD H+ APTA S+ AG+L+K YG R ++ L P +A + + + L I + YG Sbjct: 230 TWSPDGHASAPTAVSMLHAGVLMKLGGYGCFRVAMYLMPEGAAMWGDVFLILTTISVVYG 289 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 A+ A QTD+K + AY+SVSH G VL A+ ++ + GA++QM++HGL A F L G Sbjct: 290 AFSAVVQTDLKYINAYSSVSHCGLVLFALLMMTRTSCTGAILQMLSHGLMTALFFALIGM 349 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ----V 417 +Y R HTRD+R+MGGL M +L + +A LG+PG FV E + GSFQ Sbjct: 350 IYGRTHTRDVRLMGGLMKIMPFLAVGYVIAGLANLGLPGLSGFVAEMTVFVGSFQNDDTF 409 Query: 418 VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVL 477 V T+++T +V +VY L ++ + +GK + +L + E ++ L+ + Sbjct: 410 HRVCTLVATTSIVITAVYILRVVGKILYGKVLNP-EHLKLTDATWDERVAVICLIACVAG 468 Query: 478 LGFYPQPILDTSHSAIGNIQQWFVN 502 LG P I D +++ I +N Sbjct: 469 LGMAPFWISDLISNSVEPIISQLLN 493 >UniRef50_UPI0001C3127E proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3127E Length = 512 Score = 324 bits (831), Expect = 6e-87, Method: Composition-based stats. Identities = 162/492 (32%), Positives = 257/492 (52%), Gaps = 16/492 (3%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 M L LI +P + L G K+ ++++ TL +++ ++ G Sbjct: 1 MTLSILIWLPLVVAVL---GGIVGGKLAPKLSILGALATLGIAISFVVRF------KTGQ 51 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 Q D WI GI+ L +DGL++L+++L L +A + + + G F Sbjct: 52 DGLQFVTDEAWISELGITYKLGVDGLNVLLLLLATFLFAIAAIFASLREWERPGLFFFWF 111 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 V+G F+A D+ LF F+++ML+P YFL +WG D +TR+ K IYT Sbjct: 112 GVAETAVLGAFVAQDLILFVAFFDLMLIPFYFLTGIWGS--GDHETRVRGTQKLVIYTLV 169 Query: 181 SGLVMLIAILALVFVHYNATGV-WTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 L+ML+A +A + TF+ L P+S G + + L F AF VKMP P Sbjct: 170 GSLLMLVAAIATGVLASQQHDTELTFSISALQQLPLSDGSQDWIFLCFAAAFLVKMPAFP 229 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 LHGWLPD + P +G+L K AAYG LR LP+FP+AS F + + + + I Sbjct: 230 LHGWLPDGYKAMPLPALAVFSGVLSKVAAYGFLRIVLPVFPDASVHFQELLLLIALASIL 289 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 YG+ MAF+ +++ ++AY+SV+ MGF+ + I+ ++ QGA++QM+ HGL A LF + Sbjct: 290 YGSVMAFSAQNVRLVVAYSSVAQMGFITLGIFALNEDGAQGALLQMVNHGLVTAPLFFIV 349 Query: 360 GQLYERI-HTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVV 418 L R + +M+ MGG+ + L L L ++ATL MPG+ NFVGEF+IL G F+ Sbjct: 350 ALLAARAGGSEEMKDMGGIAFRAPVLATLFLIVSLATLAMPGSANFVGEFLILLGVFEAK 409 Query: 419 PVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLL 478 P ++ G+ A+VY L +A + S+E ++ R+L +++ V++++ L Sbjct: 410 PAFAFFASIGVALAAVYMLRAFIKAMHNRVNPSTDSRE---VTFRDLAVLVPSVIVIIAL 466 Query: 479 GFYPQPILDTSH 490 YPQ L S Sbjct: 467 ALYPQFGLKRSE 478 >UniRef50_C7M2U9 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2U9_ACIFD Length = 512 Score = 323 bits (830), Expect = 7e-87, Method: Composition-based stats. Identities = 164/506 (32%), Positives = 266/506 (52%), Gaps = 18/506 (3%) Query: 2 LLPWLILIPFIGGFLCWQ--TERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAG 59 LL WL+ +P IG + R + R + + L +++ L ++ G Sbjct: 3 LLDWLVAVPVIGALIVPMMALPREQAWLVRAFGIAMSIVELGIAVLLAVRF------HIG 56 Query: 60 IPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLN 119 P +Q D+ W+ G+ +L DG+SL++V++T +L V+A+ + + Sbjct: 57 APGFQDTQDLRWMGALGVHWYLGADGISLVLVIMTAVLFVIAMAAIKGVTDVRA--YVGW 114 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 ++ + +G F+++D+ LFF F+E+ LVP YFLIA +G S AA KFF+YT Sbjct: 115 MLLLEAACMGSFVSLDLLLFFVFFELSLVPAYFLIADFGFLGSG-----RAAIKFFVYTF 169 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 A ++L+ I+ALV +H + TG TF L +T +++ LL L F AFAVK P+ P Sbjct: 170 AGSALLLVGIIALVVIHDHQTGNLTFALPALEHTRLAASTSLLLFLAFTAAFAVKTPIFP 229 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 H W PD +++AP V +AG++ K +YG++RF L LFP S + A + + L V GI Sbjct: 230 FHTWSPDTYAKAPIPAVVIVAGVMAKLGSYGIVRFDLGLFPGTSRQLAWLMLTLAVAGIL 289 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 +GA +A + + RL+ Y+S+SHMGF+++ I+ S G+V+QM+ HG+ A +F+L Sbjct: 290 WGAIVAAGERHLGRLVGYSSLSHMGFIVLGIFAFSTEGLAGSVLQMVNHGIYTAAMFLLL 349 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP 419 G +Y+R T D +GGL L +A G+PG FVGEF+IL G+F Sbjct: 350 GMIYDRSGTLDASRLGGLQRHAPVLAGAFTVVVMAQAGLPGLNGFVGEFLILVGTFVTHR 409 Query: 420 VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLG 479 V++ G+V ++ Y L R + + + + RE+ +I L+ ++V LG Sbjct: 410 WWAVVAVAGVVGSAAYLLWAYQRVFHRAPSED---RVVHDLQWREVALIAPLLAIIVFLG 466 Query: 480 FYPQPILDTSHSAIGNIQQWFVNSVT 505 YP+P+L A I + Sbjct: 467 VYPRPVLSAIDPATSAIVARANRAPL 492 >UniRef50_UPI0001C3347B NADH dehydrogenase subunit M n=6 Tax=Cyanobacteria RepID=UPI0001C3347B Length = 486 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 170/499 (34%), Positives = 280/499 (56%), Gaps = 22/499 (4%) Query: 2 LLPWLILIPFIGGFLC-WQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 +L LI +P + L + ++ R A+ + L L+L + + + Sbjct: 3 VLSCLIWLPLLSAILIIFFFKQQDSNYCRLFAIFISIILLILTLVIIFKFNIN------D 56 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 P+ Q WI + G++ L +DGLSL ++ L LL ++ + S K I+K Q F++ + Sbjct: 57 PEIQFYESFLWIKKIGLNYSLGVDGLSLPLLCLNNLLTLITIYSSGKNIQK-QNFYYGLI 115 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + G+ G FL+ D+ LF F+E+ +P+YFL+ +WG G R A+ KF IYT Sbjct: 116 FILNSGISGAFLSQDLLLFLIFYELETIPLYFLLVIWG-----GIKRDYASIKFLIYTSI 170 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 SG+++LI+ L LV++ + TFNY L + +S + L++ I ++K+P+VP Sbjct: 171 SGILVLISFLGLVWL----AEIPTFNYWSLRSHSLSLTHQLFLLIPLLIGLSIKIPIVPF 226 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H WLPD H +A T S+ LAGILLK YGLLRF + LFP+ +P+ L V+ Y Sbjct: 227 HSWLPDTHVEASTPVSILLAGILLKLGTYGLLRFGIGLFPDGWVFLSPVLATLAVVSALY 286 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 GA A AQ D+K+++AY+S++HM ++L+A + L+ AV QMI+HGL +A LF+L G Sbjct: 287 GASCAIAQKDMKKVVAYSSIAHMAYILLASSASTPLSLNAAVFQMISHGLISALLFLLVG 346 Query: 361 QLYERIHTRDMRMMGGLWSK---MKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV 417 +YE+ +RD+ + GL++ + +L + +A+ G+PG F+ EF++ GSF V Sbjct: 347 IVYEKTGSRDVDFLSGLFNSQHGLPITGSLIILGVMASSGIPGMIGFIAEFLVFRGSFPV 406 Query: 418 VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVL 477 P+ T++ G +VY L M++R +FG+ ++ + +P + E LLL VL++ Sbjct: 407 FPIQTLLCLIGSGLTAVYFLLMVNRVFFGRLTPRLVN--IPRIYWSERSPALLLTVLIIT 464 Query: 478 LGFYPQPILDTSHSAIGNI 496 LG P +L S ++I + Sbjct: 465 LGIQPNWLLRWSETSINIL 483 >UniRef50_D1BW17 Proton-translocating NADH-quinone oxidoreductase, chain M n=3 Tax=Actinomycetales RepID=D1BW17_XYLCX Length = 527 Score = 323 bits (828), Expect = 1e-86, Method: Composition-based stats. Identities = 165/508 (32%), Positives = 249/508 (49%), Gaps = 19/508 (3%) Query: 3 LPWLILIPFIGGFLCWQTER---FGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAG 59 L LI P + T R G R +AL+ + LAL + +L +A Sbjct: 6 LTALIAWPLVAALATATTGRGRTLGAGRARQVALVGSLVELALGVGAFLAFD-----TAR 60 Query: 60 IPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF---F 116 + Q WIP G S + +DG++LL+V L+ L L +L +WKE + Sbjct: 61 AAEHQLLETHRWIPSIGASYAVGVDGVALLLVGLSVGLVPLVILAAWKEQGGDLARLRTY 120 Query: 117 HLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFI 176 ++ + ++ VF A D+FLF+ +E ML+P+YFLI +G G R AA KF + Sbjct: 121 LATVLVLQSFMVAVFAARDVFLFYVLFEAMLIPVYFLIGGFG----QGAQRRYAAVKFLL 176 Query: 177 YTQASGLVMLIAILALVF-VHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKM 235 Y+ A GLVML+A++AL V G TF + L + + L+ GFF+AFA+K Sbjct: 177 YSLAGGLVMLVAVIALYLQVPAAERGPQTFLVDNLSGLELGTTAGRLMFCGFFLAFAIKA 236 Query: 236 PVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGV 295 P+VP+H WLPD A S L +L K +G+L LPLFP A+ AP + L V Sbjct: 237 PLVPVHSWLPDVAENATPGTSTLLISVLDKVGTFGMLTLCLPLFPEAARWAAPAVVVLAV 296 Query: 296 IGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGL 355 + I YGA +A QTD+ RLI YTSVSH GF+++ I+T + GA M+ HG+S L Sbjct: 297 VSILYGAILAIGQTDLLRLIGYTSVSHFGFIVLGIFTFTATGTAGASFMMLNHGISTGAL 356 Query: 356 FILCGQLYERIHTRD--MRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFG 413 F++ G + R R + GGL L L ++ +PG F E ++ G Sbjct: 357 FLVAGFVIARHPERSQRIADYGGLRIAAPILGGSFLVAGLSAAALPGLATFGSEILVFLG 416 Query: 414 SFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQ-ELPGMSLRELFMILLLV 472 +F V +++ +V A++Y L R + G + ++ +P + RE + +L+ Sbjct: 417 AFSAVQWAGIVAVPAVVLAAIYVLLTYQRIFTGTVPAGLSPDGRVPDLDGRERTVAGVLI 476 Query: 473 VLLVLLGFYPQPILDTSHSAIGNIQQWF 500 LL+LLGF P L + + Sbjct: 477 ALLLLLGFVPNLGLQYVDAPATTTIEQV 504 >UniRef50_B8G566 Proton-translocating NADH-quinone oxidoreductase, chain M n=6 Tax=Chloroflexus RepID=B8G566_CHLAD Length = 533 Score = 323 bits (828), Expect = 1e-86, Method: Composition-based stats. Identities = 173/517 (33%), Positives = 269/517 (52%), Gaps = 25/517 (4%) Query: 10 PFIGGFLCWQTERFGVKVPRWIALITMGLTLALS---LQLWLQGGYSLTQSAGI-PQWQS 65 P IG + + RW A+ TL ++ + L+ G Y I P Q Sbjct: 16 PTIGALILLVLPNGRPMLYRWTAMSIALATLLVAGTVIGLFYTGPYGPAAGTVIGPPLQF 75 Query: 66 EFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILG 125 + W+ G S + +DG++L +V LT L A+ +W+ + L++ Sbjct: 76 VDTVVWLTAIGASYFIGVDGINLWLVGLTAFLTPFAIAATWQRQTRSLRLLLALLLFAET 135 Query: 126 GVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVM 185 +GVFLA DM LF+ F+E+ L+PM FLI +WGH R+TA K F+YT L+M Sbjct: 136 AFLGVFLAQDMLLFYVFYELALIPMIFLIGMWGHHG-----RVTATLKLFLYTFGGSLLM 190 Query: 186 LIAILALVFVHYNA------TGVWTFNYEELLNT------PMSSGVEYLLMLGFFIAFAV 233 L AI+ L +H NA TF +++ + + LL FF+AFA+ Sbjct: 191 LFAIIGLHILHRNAIATINPGFTGTFALNQIVADLRSGLFSLDPLMAQLLFGAFFLAFAI 250 Query: 234 KMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWL 293 K+ + PLH WLPDA+S APT ++ LAG++ K AYG +RF+L LFP ++ AP L Sbjct: 251 KLALWPLHSWLPDAYSVAPTPAAIILAGLMAKFGAYGFIRFNLTLFPEVASWAAPAIAVL 310 Query: 294 GVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAA 353 VIGI YGA +AF Q D++R+IAY S+SHM F+ + I T + + GA++QM+AHG+ A Sbjct: 311 AVIGIIYGALIAFTQRDMQRMIAYASMSHMNFIALGIVTLTAIGINGALLQMVAHGVIMA 370 Query: 354 GLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFG 413 L ++ + ER +R++ GGLW L+L +A G+PG FVGEF +L G Sbjct: 371 ALLLIITVIEERRDSRELTSFGGLWRVTPVYAGLTLLTLLAMAGLPGLSGFVGEFTMLQG 430 Query: 414 SFQV---VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILL 470 F + + G++ A+VY+L + + G+ ++ A+ +LP + REL + Sbjct: 431 VFTSPLLGWPFALGAVIGIILAAVYALNLFRMGFMGEVRN-TANLDLPDLQRRELMTLGA 489 Query: 471 LVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNSVTTT 507 L V++V LG +P +L + ++ + +V Sbjct: 490 LAVVIVALGLFPNVLLSGMNGSVQGLVDALTPAVQAA 526 >UniRef50_A0LEQ7 Proton-translocating NADH-quinone oxidoreductase, chain M n=2 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LEQ7_SYNFM Length = 506 Score = 322 bits (826), Expect = 2e-86, Method: Composition-based stats. Identities = 153/492 (31%), Positives = 250/492 (50%), Gaps = 18/492 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L ++L +G + K+ + ++L GL L L L L+ Sbjct: 26 ILSTILLSTVLGLLVILFIPADRPKLIKQVSLGFAGLGLVLCLWLYQAYDLQ------KG 79 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q W+ GI A+DG++L M++LT ++ V W ++E F + Sbjct: 80 GLQFVERFLWVESLGIYYFNAVDGINLPMLLLTAVVLFTGVWTMW-DLELRVKEFFALVF 138 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 ++ GV GVF+++D+F F ++++ L PMY LIA+WG + A K +Y A Sbjct: 139 LLVAGVYGVFMSMDLFWIFVWYDVSLFPMYPLIAIWGST-----RKEYGAMKLTLYLLAG 193 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 ++L IL L + G TF+ EL S + L + F+I F + V PLH Sbjct: 194 SALILPGILYL----WAQAGGVTFDLFELQKIGFSPFAQKLAFIFFYIGFGILAAVWPLH 249 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 W P H APTA S+ AG+L+K AYG+LR + L P A +A + LG +GI YG Sbjct: 250 TWSPVGHVAAPTAVSMIHAGVLMKLGAYGILRLGMTLCPEGLAYWADLMALLGTVGIVYG 309 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 A++ AQTD+K +I Y+SVSHMG V + + T + GAV QM AHG+ A F G Sbjct: 310 AFVGLAQTDLKYVIGYSSVSHMGMVGLGLSTMTVNGINGAVFQMFAHGVMTALFFSAVGY 369 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 +Y+R HT+ + +GGL M A + A + +G+P +F E ++ + + PV Sbjct: 370 IYDRTHTKMIPDLGGLSRTMPVASAFFIVAAFSGIGVPCMASFWAELLVFLSAVKTYPVR 429 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 +++ FGLV ++++ L ++ R ++G+ + A +P + L ++LV +++ G + Sbjct: 430 GILAVFGLVVSALFMLRVVQRTFYGERNERWA--HIPDVPLFLATPRIILVSIIIFFGIF 487 Query: 482 PQPILDTSHSAI 493 P+ +LD SA+ Sbjct: 488 PKLMLDVIQSAV 499 >UniRef50_A5FKK8 NADH dehydrogenase subunit M n=2 Tax=Flavobacterium RepID=A5FKK8_FLAJ1 Length = 483 Score = 322 bits (825), Expect = 3e-86, Method: Composition-based stats. Identities = 155/507 (30%), Positives = 264/507 (52%), Gaps = 24/507 (4%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 M + +++I +G F+ + G K+ +AL L S+ L S Sbjct: 1 MNVSLILIILLVGAFVTYFA---GDKIASKVALFFSLAALGCSVVLLNHFNAGENIS--- 54 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 WI + IS L DGL+L M++LT L + + S+ K F+ + Sbjct: 55 ------LINAWITQPKISFALNADGLALAMLLLTTALTPIIIFSSFGNEYKNAKAFYALI 108 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 +++ + G FLA D L++ FWE+ L+P+YF+ +WG+ D + R A KFFIYT A Sbjct: 109 LFMAFAMTGTFLAADGLLYYIFWELALIPIYFIALIWGN--GDAEERRKAVVKFFIYTLA 166 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 L ML A + L +F E+L +S+ ++ + L FF+A+A+K+P++P Sbjct: 167 GSLFMLTAFIYLY------QKAGSFLIEDLYKVQLSACEQFWIFLAFFLAYAIKIPIIPF 220 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H W + + +APT G++ L+GI+LK Y ++R+ LP+ +A+ EF I + LG+ G+ Y Sbjct: 221 HTWQANVYQKAPTVGTMLLSGIMLKMGLYSVIRWQLPIAADAAIEFKNIFIALGIAGVIY 280 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 G+ +A Q D+K+L+AY+S++H+G + YT + ++GAV+QMIAHG GLF Sbjct: 281 GSIVALRQKDLKKLLAYSSLAHVGLIAAGAYTLTLDGFRGAVLQMIAHGFVVVGLFYAAE 340 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 +Y R TR++ +GG+ ++ ++ L +A++ +P T NFVGEF +L+ Q+ Sbjct: 341 IIYRRFETRNISELGGIRTQSPKFTSMFLILVLASVALPTTFNFVGEFTVLYSLSQINIW 400 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 V+ ++ + Y L M G+ S+I +S+ E + ++ +L+ GF Sbjct: 401 FAVLGGTTIILGAYYMLKMFQNVMLGETNSKI----FADVSINEGISMAAIIAVLIFFGF 456 Query: 481 YPQPILDTSHSAIGNIQQWFVNSVTTT 507 YP+PI D ++ I +T Sbjct: 457 YPKPITDLITPSLETILSVIEKKYSTL 483 >UniRef50_Q2GKR0 NADH dehydrogenase I, M subunit n=5 Tax=Anaplasma RepID=Q2GKR0_ANAPZ Length = 491 Score = 321 bits (823), Expect = 5e-86, Method: Composition-based stats. Identities = 159/504 (31%), Positives = 254/504 (50%), Gaps = 26/504 (5%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 ++P++ILIP +GG L K+ + + T S+ + L + Sbjct: 1 MIPFMILIPVLGGCLIAFLRDSSSKLRGGLFISITFATFIASIAVLLSFYGNGLPVLRDY 60 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSW-----KEIEKYQGFF 116 W I A+D LSLLMV+L+ L L LC ++ + F Sbjct: 61 TW-------------IGEVFAVDRLSLLMVILSTFLFFLCALCGVFSRACGVDKESESSF 107 Query: 117 HLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFI 176 L+ + V+GVF +F+ F+E L+PM+F+I WGH RI+AA +F I Sbjct: 108 FALLLLLEATVLGVFSVHTSLMFYVFFEASLIPMFFIIGKWGHG-----DRISAAFRFLI 162 Query: 177 YTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMP 236 YT A+ L+ LI ++ ++ +F + + + G+ L + F AFAVK+P Sbjct: 163 YTGAASLLFLIGLV--YSRVFSLGMFESFYADVSVALALPIGIRIALWIACFFAFAVKLP 220 Query: 237 VVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVI 296 +VP H WLP AH QAPT GSV LAG+L+K YG +RF L P S + + ++L I Sbjct: 221 MVPCHTWLPKAHVQAPTLGSVLLAGLLIKMGGYGFIRFCLSALPEISWKLSEFVVYLSAI 280 Query: 297 GIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLF 356 + Y + +AFAQ ++K L+AY+SV+HM FV I++ ++ GA+ QM++HGL +A LF Sbjct: 281 SLVYSSLVAFAQKNMKTLVAYSSVAHMSFVAAGIFSLNESGIVGAIFQMLSHGLISAALF 340 Query: 357 ILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ 416 + G +Y R T DM GG+ + M L + +FF++A+ G+PGT F+GEF+ + G FQ Sbjct: 341 LCVGMIYSRTGTMDMSKCGGIAASMPKLSFMMIFFSMASAGLPGTSGFIGEFLSILGIFQ 400 Query: 417 VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLV 476 V G+V ++ Y+L + +G + + ++ E ++ +L L++ Sbjct: 401 AFRFTAVCFAVGVVLSAAYTLRLCREVIWGSSPEGAKVID-SDINAVEFVILGILAALVL 459 Query: 477 LLGFYPQPILDTSHSAIGNIQQWF 500 G YP ++ I I Sbjct: 460 FFGIYPASVITFLKPWISAILPEL 483 >UniRef50_D1PWI6 Proton-translocating NADH-quinone oxidoreductase n=6 Tax=Prevotella RepID=D1PWI6_9BACT Length = 507 Score = 321 bits (823), Expect = 5e-86, Method: Composition-based stats. Identities = 149/508 (29%), Positives = 245/508 (48%), Gaps = 15/508 (2%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQG-GYSLTQSAGIP 61 L ++IP + W R + ++ LAL++ L G T A Sbjct: 4 LTLFVVIPLLMLLGLWIAR--NDSQVRGVMVVGSVALLALAIYLVFAFLGARATMPAEQY 61 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 + +PW I +DG++++M++L+ ++ + SW+ + Q + L Sbjct: 62 PFLFGDAIPWFEPLNIFYRTGVDGIAVVMILLSAIIVITGTFASWQ-LHPMQKEYFLWFT 120 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + GV G F++ D+F F F+E+ L+PMY LI +WG + +A K + Sbjct: 121 LLSAGVFGFFISEDLFTMFMFYEVALIPMYLLIGVWGTGPKE-----YSAMKLTLMLMGG 175 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNT-PMSSGVEYLLMLGFFIAFAVKMPVVPL 240 +++I IL + F + +G +T + + + + V+ + FI F V + P Sbjct: 176 SALLIIGILGIYFFNGQYSGTYTMDVVAIAQSHAIPVFVQKVFFPFIFIGFGVLGALFPF 235 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H W PD H+ APTA S+ AG+L+K YG R ++ L P+A+ E I + L I + Y Sbjct: 236 HTWSPDGHASAPTAVSMLHAGVLMKLGGYGCFRVAMFLLPDAARELCWIFLILTTISVVY 295 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 GA A QTD+K + AY+SVSH G VL A+ +Q A GAV+QM++HGL A F + G Sbjct: 296 GALSACVQTDLKYINAYSSVSHCGLVLFALCMMTQTAINGAVLQMLSHGLMTALFFAVIG 355 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 +Y R TRD+R +GGL + +L + +A LG+P FV E I G+FQV Sbjct: 356 MIYHRTGTRDVRRLGGLMKILPFLSVAYVVAGLANLGLPLFSGFVAEMNIFVGAFQVNDT 415 Query: 421 I----TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLV 476 T+I+ +V +VY L ++ + + K +Q +L + E + L+ + Sbjct: 416 FHRTCTIIACTSIVITAVYILRVVGKILYQKVPNQ-DYYKLTDATWDERLAVGALIFCVA 474 Query: 477 LLGFYPQPILDTSHSAIGNIQQWFVNSV 504 LG +P + A+G + Q + S Sbjct: 475 GLGTFPLWAQSIINDAVGPMIQHIMGST 502 >UniRef50_A7UQZ1 AGAP012727-PA (Fragment) n=1 Tax=Anopheles gambiae str. PEST RepID=A7UQZ1_ANOGA Length = 458 Score = 319 bits (818), Expect = 2e-85, Method: Composition-based stats. Identities = 154/471 (32%), Positives = 254/471 (53%), Gaps = 23/471 (4%) Query: 28 PRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLS 87 ++IAL+ L +ALS ++ G + Q + + P S+HL +DGLS Sbjct: 1 AKYIALVLAFLEMALSF--YMLSGLDFAATIDSQNLQYQINTPESSFLKTSLHLGVDGLS 58 Query: 88 LLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMML 147 +L ++LT +L L +L S+ + KY+ F+ ++ + G+IGVF ++D +F+ FWE+ L Sbjct: 59 MLFILLTTILTSLIILSSFSQTVKYKNTFYGLILLMQFGLIGVFTSLDGLMFYAFWEVTL 118 Query: 148 VPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNY 207 +P++F+ LWG + ++ TKFF+YT L ML ++ + +F Sbjct: 119 IPIWFICGLWGQED----QKLRFTTKFFVYTFIGSLFMLGGLIYVY------NHSASFAL 168 Query: 208 EELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTA 267 ++ N+ ++ + ++ F+AFAVK+PV P H W PD ++ +PT G++ L+GI+LK A Sbjct: 169 LDMYNSDLNVTQQTIVFWFIFVAFAVKLPVFPFHTWQPDTYTYSPTEGTMLLSGIMLKMA 228 Query: 268 AYGLLRFSLPLFPNASAEFA-PIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFV 326 +G+LR+ LP+ P A + I + L +IGI YGA +A + DIKR+I Y+S+SH+G + Sbjct: 229 IFGVLRYLLPIAPGAIMGISGQIVLTLAIIGIVYGALIAIVKNDIKRIITYSSLSHIGLI 288 Query: 327 LIAIYT---------GSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGL 377 + I+ + +GAVIQ AHG++ GLF LY R TRD+R MGGL Sbjct: 289 VAGIFASAILTLNGRFTTEGAEGAVIQAFAHGINIVGLFYCADILYRRFKTRDIRQMGGL 348 Query: 378 WSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSL 437 L L ++ +P T F+GEF++L +IS ++ +VY L Sbjct: 349 AKVAPKFAVLFLIIVFGSMAVPLTNGFIGEFILLKSISDYNTTAVIISGLTVILCAVYML 408 Query: 438 AMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDT 488 M +A FGK + + + +S E ++ LVV ++L G +P IL+ Sbjct: 409 RMYGKAMFGKGDEVLLAN-MKDVSGVEFSVLASLVVFVILFGIFPNSILEM 458 >UniRef50_A7NL13 Proton-translocating NADH-quinone oxidoreductase, chain M n=2 Tax=Roseiflexus RepID=A7NL13_ROSCS Length = 566 Score = 318 bits (816), Expect = 3e-85, Method: Composition-based stats. Identities = 179/556 (32%), Positives = 270/556 (48%), Gaps = 58/556 (10%) Query: 3 LPWLILIPFIGGFLCWQTE--RFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 L LIL P IG L R + + A + LAL++ +W+ + T G Sbjct: 12 LTLLILSPLIGLALTGLAGALRLDDRTVKIGATAWSTIPLALAIVVWVGFDPNATAD-GQ 70 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 Q +PW+ + + +DG+S+ +V+LT + +A+L S+ I + + Sbjct: 71 GVVQFVEKIPWVQAIRVDYFVGVDGISMPLVILTAAMAPVAMLASFG-ITGRVKLYIALM 129 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHK----ASDGKTRITAATKFFI 176 + ++G FLA++ F FF FWE LVP YFLI WG + A + R AA KFF+ Sbjct: 130 FLLEAAMLGYFLALNFFFFFIFWEFSLVPAYFLIQGWGRRHGADADPEQRRRDAALKFFV 189 Query: 177 YTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVE---------------- 220 YT A + ML+ + +V A G+ TF+ L VE Sbjct: 190 YTMAGSIGMLL-LFQFFYVATAAAGIPTFDLITLARLGQGLTVERAALDPVNLTLREIIF 248 Query: 221 --------------------YLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLA 260 + FIAFA+K+ + P H WLPDA+S+APTA S+ LA Sbjct: 249 NYVEQLGIAAVLGRYPLLYTSIAFWAIFIAFAIKLGIWPFHTWLPDAYSEAPTAASILLA 308 Query: 261 GILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQT--DIKRLIAYT 318 ++ K AYG+LR LP P+A+ F P L +IG+ GA+ A Q D+KRLIAYT Sbjct: 309 AVMSKMGAYGMLRLMLPFVPDAAQYFGPAIGALALIGVVAGAFGALGQVGGDLKRLIAYT 368 Query: 319 SVSHMGFVLIAIYTGSQLA----------YQGAVIQMIAHGLSAAGLFILCGQLYERIHT 368 S++HMG+V +AI + + GA+ QM+AHGLS LF+L G L ER + Sbjct: 369 SINHMGYVGLAIAAAATVGSADSATRATAINGALFQMVAHGLSTGALFLLAGMLAERCGS 428 Query: 369 RDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFG 428 +M + GL + M A LG+PG FVGEF I G + +P+ +++T G Sbjct: 429 DEMGTLAGLRTTMPVFAGAMGVATFANLGLPGLAGFVGEFFIFRGVWASLPLFALLATIG 488 Query: 429 LVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDT 488 LV ++ L M + + GK + A ++ ++ RE + L++ L++LG YP PI+D Sbjct: 489 LVVTALALLRMYGQLFHGKTNERSAMPDMR-LAGREFLAVAPLLIALLILGVYPAPIMDL 547 Query: 489 SHSAIGNIQQWFVNSV 504 S+ + + F V Sbjct: 548 SNRTATALVEVFTRVV 563 >UniRef50_Q9ZJV5 NADH oxidoreductase I n=12 Tax=Helicobacter RepID=Q9ZJV5_HELPJ Length = 512 Score = 318 bits (815), Expect = 4e-85, Method: Composition-based stats. Identities = 152/500 (30%), Positives = 264/500 (52%), Gaps = 19/500 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL +I P + L + + R A++ + L L L LW Sbjct: 8 LLSVVIFFPMLSALLAFFM---SDQASRAYAIVIALIELLLVLLLWHGFDIQ------TA 58 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q E + G++ H+ +DG++L +++L ++ +L+V+ +++ + F + L+ Sbjct: 59 GMQFEEMKELAYQIGVNYHVGVDGIALFLLLLNAIVVLLSVIY----VKERRKDFVICLL 114 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + G ++GVF ++++ F+ FWE+ L+P+ +LI +G +I + KFF+YT + Sbjct: 115 LLEGILMGVFSSLNVIFFYAFWEISLLPVLYLIGRFGRN-----NKIYSGMKFFLYTFLA 169 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 L ML+ IL + + + N G+ +F+ + SSG++ L + F I AVK+P+ PLH Sbjct: 170 SLCMLLGILYIGYDYANNYGMMSFDILDWYQLNFSSGIKTWLFVAFLIGIAVKIPLFPLH 229 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLP A+S APT GSV L+ +L K Y LLRF LPLFP S + + + I YG Sbjct: 230 TWLPYAYSNAPTLGSVMLSALLSKMGTYALLRFLLPLFPELSEIYLTPIAIVALCMIIYG 289 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 ++A+AQ D+K LIAY+S SHMG V++ +++ + GAV M AHG+ GLF+L G Sbjct: 290 GFLAYAQKDLKTLIAYSSFSHMGVVVLGVFSFNVEGVSGAVFMMFAHGVIVMGLFLLAGI 349 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 L ER + ++ G + A + +A +GMP + FVGEF+ L G F P++ Sbjct: 350 LEERASSLEIARFGSIAKSAPVFAAFFMIVLMANVGMPLSIGFVGEFLSLLGFFATYPLL 409 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQEL-PGMSLRELFMILLLVVLLVLLGF 480 +I+ ++ ++VY L +FG K+ + ++ RE+ ++ +++ L+++LG Sbjct: 410 AIIAGTSIILSAVYMLTSYKDVFFGNLKTGNNQISVFEDLNAREVGVLSVILALILILGI 469 Query: 481 YPQPILDTSHSAIGNIQQWF 500 YP+ +L + + Sbjct: 470 YPKALLKPIEQGSKQLLEVI 489 >UniRef50_P26288 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic n=371 Tax=Viridiplantae RepID=NU4C_ARATH Length = 500 Score = 316 bits (811), Expect = 1e-84, Method: Composition-based stats. Identities = 165/505 (32%), Positives = 262/505 (51%), Gaps = 21/505 (4%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L +++ P G L G KV +W + L L L+ + P Sbjct: 7 LTIIVVFPISAGSLMLFLPHRGNKVNKWYTICICILELLLT-----TYAFCYNFKMDDPL 61 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMW 122 Q D WI F + IDGLS+ ++LTG + LA L ++ + + FFH ++ Sbjct: 62 IQLSEDYKWIDFFDFYWRMGIDGLSIGTILLTGFITTLATLAAFP-VTRDSRFFHFLMLA 120 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 + G IG F + D+ LFF WE+ L+P+Y L+++WG GK R+ +ATKF +YT S Sbjct: 121 MYSGQIGSFSSRDLLLFFIMWELELIPVYLLLSMWG-----GKKRLYSATKFILYTAGSS 175 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 + +LI +L + N T N E L N +E L +GF IAFAVK P++PLH Sbjct: 176 IFLLIGVLGISLYGSNE---PTLNLELLANKSYPVTLEILFYIGFLIAFAVKSPIIPLHT 232 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGA 302 WLPD H +A + + LAGILLK AYGL+R ++ L P+A + F+P + +G I I Y A Sbjct: 233 WLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSMFSPWLLVVGTIQIIYAA 292 Query: 303 WMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQL 362 + Q ++K+ IAY+SVSHMGF++I I + + GA++Q+I+HG A LF L G Sbjct: 293 STSPGQRNLKKRIAYSSVSHMGFIIIGISSITDPGLNGAILQIISHGFIGAALFFLAGTS 352 Query: 363 YERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP--- 419 Y+RI + MGG+ + + + ++A+L +PG F+ EF++ FG Sbjct: 353 YDRIRLVYLDEMGGMAISIPKIFTMFTILSMASLALPGMSGFIAEFIVFFGIITSQKYFL 412 Query: 420 ----VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLL 475 I + G++ +Y L+ML + ++G I + RELF+ + +++ + Sbjct: 413 ISKIFIIFVMAIGMILTPIYLLSMLRQMFYGYKLINIKNFSFFDSGPRELFLSISILLPI 472 Query: 476 VLLGFYPQPILDTSHSAIGNIQQWF 500 + +G YP +L + + +I + Sbjct: 473 IGIGIYPDFVLSLASDKVESILSNY 497 >UniRef50_UPI0001C30612 NADH dehydrogenase subunit 4 n=1 Tax=Phaeoceros laevis RepID=UPI0001C30612 Length = 487 Score = 315 bits (808), Expect = 2e-84, Method: Composition-based stats. Identities = 146/479 (30%), Positives = 245/479 (51%), Gaps = 25/479 (5%) Query: 21 ERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIH 80 +++ R I T +T S W++ ++Q + W P I+++ Sbjct: 30 PDSRIQLIRSIGPRTFLITFLYSPFFWIEFD------NSTAKFQFVESIRWPPYSNINLY 83 Query: 81 LAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFF 140 + IDG+ L VLT L + + W I+ Y+ + + + +I V D LF Sbjct: 84 IGIDGIFLSSAVLTTFLIPIRISVGWSSIKSYKKEYMIAFLIRESLMIAVSRMSDFLLFH 143 Query: 141 FFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNAT 200 F+E + + M+ + +I AA + F+YT + + ML+AI ++ F Sbjct: 144 VFFESVSISMF------------RQRKIQAAYQSFLYTLSGFVFMLLAISSISFQ----- 186 Query: 201 GVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLA 260 T + LL T S + LL + FF +FAVK+P+VP+H LP+A+ +APTAGSV A Sbjct: 187 -TGTTDLRILLTTESSEWRQVLLRIAFFASFAVKVPMVPVHIRLPEAYVEAPTAGSVISA 245 Query: 261 GILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSV 320 GIL K YG LRFS+ +FP + F L VI I Y Q D+K++IAY SV Sbjct: 246 GILSKLGTYGSLRFSILMFPEVTFFFISFICTLSVIAIIYTPLTTVRQIDLKKMIAYFSV 305 Query: 321 SHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSK 380 +HM FV I +++ + +G++ M++HGL + G LY+R TR ++ GGL S Sbjct: 306 AHMNFVTIGMFSLNIQGIEGSISPMLSHGLVLLAPPLCVGALYDRHKTRLVKYYGGLVST 365 Query: 381 MKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAML 440 M +SLFF +A + + G+ +F+GEF+IL G+F+ ++ + G++ + Y L + Sbjct: 366 MSIFCTISLFFTLANMSLLGSSSFIGEFLILIGAFERNSLVATPAALGMILGAAYFLWLY 425 Query: 441 HRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQW 499 + FG K ++ ++ RE+F+ LL +V ++ +G Y + L+ ++ + N+ Q Sbjct: 426 NCVVFGNFKPNFL-KKFSDLNRREVFISLLFIVGVIWMGVYLEVFLECMYTCVSNLVQH 483 >UniRef50_C9MQ80 NADH dehydrogenase, M subunit n=18 Tax=Bacteroidales RepID=C9MQ80_9BACT Length = 503 Score = 315 bits (807), Expect = 3e-84, Method: Composition-based stats. Identities = 154/512 (30%), Positives = 247/512 (48%), Gaps = 21/512 (4%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L ++IP + W + ++ G T L +WL + ++AG Sbjct: 4 ILTVFVIIPVLMLCGLWVAKNDNQVR----GMMVAGSTALLIGAIWLTVYFVQQRNAGNH 59 Query: 62 Q-WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 + W I+ + +DG+S++M++L+ ++ SW+ +E + + L Sbjct: 60 DAMLLANSVMWFKPMHIAFSVGVDGISVVMILLSAIIVFTGTFASWQ-LEPMKKEYFLWF 118 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + + GV G F++ DMF F F+E+ L+PMY LI +WG + +A K + Sbjct: 119 VLLASGVFGFFISTDMFTMFMFYEVALIPMYLLIGVWGTGPKE-----YSAMKLTLMLMG 173 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELL-NTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 ++++ IL + + +G T + EL M ++ + FI F V + P Sbjct: 174 GSALLILGILGIYYF----SGATTMDVIELARMHAMPKNIQNIFFPFVFIGFGVLGALFP 229 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 H W PD H+ APTA S+ AG+L+K YG LR ++ L P+A +API + L I + Sbjct: 230 FHTWSPDGHASAPTAVSMLHAGVLMKLGGYGCLRIAMFLMPDALQTWAPIFLVLTTISVV 289 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 YGA A QTD+K + AY+SVSH G VL A+ +Q A GA++QM++HGL A F Sbjct: 290 YGALSACVQTDLKYINAYSSVSHCGMVLFALVMTTQTAITGAILQMLSHGLMTALFFACI 349 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ--- 416 G +Y R TRD+R +GGL + +L + +A LG+PG FV E I GSF+ Sbjct: 350 GMIYHRAGTRDVRYLGGLMKVIPFLAVSYVVAGLANLGLPGFSGFVAEMTIFVGSFENAG 409 Query: 417 -VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLL 475 V T+I+ +V +VY L ++ + F K ++ EL + E F I L+ + Sbjct: 410 TFHRVATIIACTAIVITAVYILRVVGKILFQKIPNK-KFYELHDATWDERFAIGCLIFCV 468 Query: 476 VLLGFYPQPILDTSHSAIGNIQQWFVNSVTTT 507 LG P + A+ I + V T Sbjct: 469 AGLGLCPLFFENMIIDAVHPIFDHIITYVPTL 500 >UniRef50_C0Z764 NADH-quinone oxidoreductase chain M n=2 Tax=Bacillales RepID=C0Z764_BREBN Length = 510 Score = 314 bits (805), Expect = 6e-84, Method: Composition-based stats. Identities = 157/516 (30%), Positives = 257/516 (49%), Gaps = 30/516 (5%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL L+ P + + V + + + L L+ ++ Y Sbjct: 5 LLSSLVFSPLLAIIVMAFIPNRHAGVIKQVGIYGTLPALILAGWMFGMFNY------ETA 58 Query: 62 QWQSEFDMPWIP------------RFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI 109 Q WI F I+ L IDG+S+ +++LT ++G LA + SW+ I Sbjct: 59 NLQFVEKHSWISIPIGMAQAGTVFAFEINYELGIDGISMPLILLTAIIGTLAAIASWQ-I 117 Query: 110 EKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRIT 169 +K Q + + +L G++GVF A ++FLFF F+E+ LVPMYFLI +WG+ R Sbjct: 118 KKRQKEYFILFHLLLIGMLGVFAADNLFLFFIFFELTLVPMYFLIGIWGYG-----EREQ 172 Query: 170 AATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTP----MSSGVEYLLML 225 AA KF +Y +ML+A + + + P ++ + + + L Sbjct: 173 AANKFLLYNGIGSGIMLLAFIVIFVIMRTLNIDEITAILTTPGHPITEILTPEMRFGIFL 232 Query: 226 GFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAE 285 FIAFA+K+PV P H W+ H QAP + + +GILLK AYGLLR + FP + + Sbjct: 233 VLFIAFAIKLPVFPFHTWMLRVHVQAPPSIVMIHSGILLKMGAYGLLRMGIGFFPEQAYD 292 Query: 286 FAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQM 345 F+ LG+I I YGA +AF Q D+K ++AY+S+SHMG VL+ + + + +QGA+ Q+ Sbjct: 293 FSMWIAVLGIINILYGAVLAFVQKDLKMVLAYSSISHMGIVLLGFASMNTIGFQGAMFQV 352 Query: 346 IAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFV 405 ++HG +A LF L G +++R T + +GGL M ++ + L +A+LG+PG F+ Sbjct: 353 VSHGFISALLFFLIGVIWDRTQTSMLDDLGGLAKSMPFVSGVLLAGGMASLGLPGMSGFI 412 Query: 406 GEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLREL 465 EF G F +PV+ + G+V +VY L + + FG + L E+ Sbjct: 413 SEFFAFLGLFGRLPVMAAVGAIGIVLTAVYLLRAILKTTFGPTPGRCTG--LADAQPMEV 470 Query: 466 FMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFV 501 +++L+ ++L+G YP + + A+ I Sbjct: 471 IPMVVLLGCIILIGVYPAVLGNPMQQALKTIVPIVT 506 >UniRef50_Q1AVJ1 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVJ1_RUBXD Length = 484 Score = 314 bits (805), Expect = 6e-84, Method: Composition-based stats. Identities = 162/501 (32%), Positives = 264/501 (52%), Gaps = 21/501 (4%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 M+ I IP + G + R ++ R+ A+ + + L+L ++ G L A Sbjct: 1 MITTATIFIPLL-GAILVLLLRGDERLVRYAAIGVAAVPVLLALYIYFAFGDDLDAPA-- 57 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 ++ WI I + +DG+ M L+ LL ++AV+ SW +I + GF+ L Sbjct: 58 ----LSQELTWIESLDIGYRVGLDGIGFGMFFLSALLTLIAVVASW-DIRENLGFYFALL 112 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 G++GVF + D+ LF+ F+E+ L+PMY ++ +WG + R AA KFFIYT Sbjct: 113 FLAEVGMLGVFASRDLVLFYVFFEITLIPMYLMVGIWG-----DENRRAAAIKFFIYTFL 167 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTP-MSSGVEYLLMLGFFIAFAVKMPVVP 239 ML LAL + TF+ EL +S + + + +K+P VP Sbjct: 168 GSTAMLAGFLALGVL------SGTFSIPELGEAGGLSRAAQIAIAVPVLFGLLIKVPAVP 221 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 LHGWL D + +P + +V L+G+L K +G+L+ ++PL P+ F P LGVI I Sbjct: 222 LHGWLLDVYVSSPVSTNVVLSGVLPKLGTFGILKIAIPLLPDGVEPFLPYLAVLGVINII 281 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 YGA++AF Q D+K L+AY+S+ +GF+L+ + + + Y GAV Q +AHGL +A LF+L Sbjct: 282 YGAFVAFLQPDLKALVAYSSIGTLGFILLGAASANAVGYNGAVFQQVAHGLYSALLFLLV 341 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP 419 G + R TR + +GGL ++M W L A+A +G+PG FV EFM + G + P Sbjct: 342 GIIAARTGTRRISELGGLAARMPWAGGLLALGALAAMGLPGLAVFVSEFMSIMGGYTTYP 401 Query: 420 VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLG 479 V V++ G++ +++Y L ML R FG + A +++ E+ ++ L LL++LG Sbjct: 402 VQGVLAALGIILSAMYLLYMLARVIFGPIREP-AYEQIGDAGPVEMAAVVPLAALLLVLG 460 Query: 480 FYPQPILDTSHSAIGNIQQWF 500 F+P ++ A+ + Sbjct: 461 FFPALLISVQRPAVEAVLAAI 481 >UniRef50_Q1H3T5 NADH dehydrogenase (Quinone) n=12 Tax=Proteobacteria RepID=Q1H3T5_METFK Length = 966 Score = 313 bits (804), Expect = 7e-84, Method: Composition-based stats. Identities = 131/494 (26%), Positives = 221/494 (44%), Gaps = 30/494 (6%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 M L +L LIPFIG + R G W+A+++ L+L L L +Q T I Sbjct: 1 MGLAYLTLIPFIGAIFTKLSTRLGRYSSAWVAILSAMLSLFLLWPLAMQAWQGNTVIQRI 60 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKY--QGFFHL 118 PW+P GIS+ +DGLSLL ++ L+G++ V+ + + G F+ Sbjct: 61 T--------PWMPELGISLAFRLDGLSLLFSLMILLVGLIVVIYARYYLSPRDSMGRFYS 112 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 L+ +G ++GV L+ ++ FWE+ + + LI+ W + + A Sbjct: 113 YLLLFMGSMLGVVLSENIIQLLMFWELTSLSSFLLISYWQQREEASRGARMA-------- 164 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEY-LLMLGFFIAFAVKMPV 237 +A+L + N G + + L + S Y L++L + K Sbjct: 165 LTITGGGGLAMLGGFLLLGNMAGSYDLSDILLAGDAIRSHEHYPLMLLLILLGVFTKSAQ 224 Query: 238 VPLHGWLPDAHSQAPTAGSVDL-AGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVI 296 P H WLP+A + APT S L + ++K + L R L + + E+ I +G+ Sbjct: 225 FPFHFWLPNAMA-APTPVSAYLHSATMVKAGIFLLARLFPAL--SGTPEWTWIVSGVGIA 281 Query: 297 GIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLF 356 G+++A + D+K L+AY+++SH+G ++ G+ LA + +I H A LF Sbjct: 282 TFVTGSYIALFKHDMKALLAYSTISHLGLIVALFGIGTPLAVVAGIFHIINHATFKASLF 341 Query: 357 ILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMIL----- 411 +L G + TRD+R +GGL M + L + A A G+PG F+ + M L Sbjct: 342 MLAGIVDHETGTRDIRHLGGLRRYMPYSAVLMVIAAAAMAGIPGLNGFISKEMFLDQIVA 401 Query: 412 -FGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILL 470 +F ++ I T G VF++ YS+ + H +FG + + S + + Sbjct: 402 HGNTFPHQWLLPAIVTAGAVFSAAYSIRIAHSVFFGSEPDDL-PKAPHDPSSGMQIPVAI 460 Query: 471 LVVLLVLLGFYPQP 484 LV V +G P Sbjct: 461 LVAACVAVGVLPAI 474 >UniRef50_Q1AZS5 Proton-translocating NADH-quinone oxidoreductase, chain M n=3 Tax=Bacteria RepID=Q1AZS5_RUBXD Length = 487 Score = 313 bits (804), Expect = 8e-84, Method: Composition-based stats. Identities = 160/481 (33%), Positives = 254/481 (52%), Gaps = 27/481 (5%) Query: 25 VKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAID 84 + + + GL L + +W +G A + ++ WIP G++ + +D Sbjct: 27 PRAAHALGIAFSGLALLGAAWMWARG-------ASGEGFSQVEEVAWIPSLGVAYRVGVD 79 Query: 85 GLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWE 144 G+SL +V++T +L ++++ S E+ + + + + +GVF+A+D LF+ F+E Sbjct: 80 GISLPLVLMTAVLFFVSLVFSAGIRERARS-YVALFLLLETASLGVFVALDAVLFYVFFE 138 Query: 145 MMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWT 204 + LV MYF+I+ WG++ R AA FF+YT + +L + Y + T Sbjct: 139 VTLVGMYFIISGWGYE-----DRQRAALMFFLYTLLG----SLPLLLAILGLYLGSEPNT 189 Query: 205 FNYEEL-LNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGIL 263 F+ EL N P++ L +L + F VK PV PLH WLP AH +APTAGSV LAG+L Sbjct: 190 FDMRELIANPPLTGLAATLALLAMLVTFFVKTPVFPLHTWLPAAHVEAPTAGSVILAGVL 249 Query: 264 LKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHM 323 LK YGL+RF+L + P+A + AP L YGA++A Q+D+KRL+AYTSV+HM Sbjct: 250 LKLGTYGLVRFALQMTPDAFRDLAPYVAALAAFSALYGAFVALGQSDLKRLVAYTSVNHM 309 Query: 324 GF------VLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGL 377 G+ V A +A GAV+QM++HG+ LF+L G L +R HTR+M GGL Sbjct: 310 GYVVLGVAVAAAATGARAVALDGAVLQMVSHGVVTGALFLLVGMLQDRAHTREMGAFGGL 369 Query: 378 WSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSL 437 + L + A A+LG+PG +F EF I G+ +V P V++ G+ + L Sbjct: 370 LGVVPGLGWAFVLAAFASLGLPGLAHFPAEFQIFLGTLRVYP-PAVVAVLGIAVTAGLYL 428 Query: 438 AMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQ 497 + A+ G+ + + ++L + RE ++ L+ L VL+G P L H+ + Sbjct: 429 RAIQVAFLGEPRGE--RRKLRDLGARETLAVVPLLALTVLIGVVPSLALGVIHATTEALL 486 Query: 498 Q 498 Sbjct: 487 P 487 >UniRef50_B9XFX1 Proton-translocating NADH-quinone oxidoreductase, chain M n=2 Tax=Verrucomicrobia RepID=B9XFX1_9BACT Length = 498 Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats. Identities = 167/503 (33%), Positives = 264/503 (52%), Gaps = 26/503 (5%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L W I I FIG F+ V+ R +AL+ L L + + Q Sbjct: 1 MLAWTIYISFIGVFVLLLLPAGAVRAARKVALLAAVLGLLGGIS-------GILQHKAPT 53 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 + + +PW+P GI L DG+SL +V+LTG+ V+ +L SW IE F + Sbjct: 54 EIDTITKVPWVPSLGIEYFLGADGISLTLVLLTGIAAVVGILFSWN-IEHRAKEFFAFYL 112 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 ++GGV GVFL+ D+FL F F+E+ ++P YFLIA+WG + A K +Y+ Sbjct: 113 ALIGGVYGVFLSFDLFLLFVFYELAIIPKYFLIAIWGST-----NKEYGAMKLALYSFLG 167 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 ++LI ++A Y + V T N EL ++ F+ FA+ + P H Sbjct: 168 SAMVLIGLVA----TYVMSPVKTMNLLELAKYAFPESFQHWAFPLVFVGFAILAGLWPFH 223 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 W P H APTA S+ LAG+++K AYG LR ++ LFP A + + L VIGI YG Sbjct: 224 TWAPTGHVAAPTAASMLLAGVVMKLGAYGALRVAMTLFPQGLAIWKDVIGLLAVIGIVYG 283 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG- 360 A +A Q D K +I Y+SVSHMGFVL+ + T + + + GAV+QM +HG+ A LF + G Sbjct: 284 AMVALVQKDFKFVIGYSSVSHMGFVLLGLLTLNTIGWSGAVLQMFSHGIIAGLLFGVVGR 343 Query: 361 QLYERIHTRDMRMMG--GLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVV 418 +Y+R HTR++ ++ GL + + ++A++GMPG F E +L G+++ Sbjct: 344 MVYDRTHTRELPVLKKLGLSKALPFAACTFALASLASMGMPGFSGFAAELQVLIGAWKAF 403 Query: 419 PVITVISTFGLVFASVYSLAMLHRAYFGKAKSQI------ASQELPGMSLRELFMILLLV 472 PV V++ FG++ Y+L +L ++F I A+ LP +S+ E +L+ Sbjct: 404 PVYAVLAGFGVLVGVAYTLRVLQLSFFNDPTPAIEGEAGEATHPLPTISVPERLGAAILL 463 Query: 473 VLLVLLGFYPQPILDTSHSAIGN 495 + +++G YP+ +LD + + Sbjct: 464 GITIVIGIYPKLLLDLIGPSFDS 486 >UniRef50_Q6MDQ4 Putative NADH-ubiquinone oxidoreductase chain M n=2 Tax=Parachlamydiaceae RepID=Q6MDQ4_PARUW Length = 481 Score = 311 bits (798), Expect = 3e-83, Method: Composition-based stats. Identities = 153/489 (31%), Positives = 244/489 (49%), Gaps = 25/489 (5%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L WL LIPF+ L K +W +L + L Sbjct: 4 LFWLFLIPFVSSILIGILPINEKKHLKWASLGLSLIPFFFLLG------------NHFVW 51 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMW 122 S F W I+ L ID +SLL + LT ++ + + E F+ +++ Sbjct: 52 IGSFFQYEWFALLSITFSLEIDSISLLFLYLTAIIIPIVFMNVNSEKLSNPKLFYGLILF 111 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 + G + G F+ D+ F FWE ML+P+YFL+ +WG G R AA KF +Y A Sbjct: 112 LQGLLGGFFMTRDLVFFTIFWEAMLLPIYFLMNMWG-----GSKRHEAAIKFIVYMFAGS 166 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 +M+ A+LAL F+ TF+ +L + L+ F +AFAVK P+ P H Sbjct: 167 ALMIAAVLALYFL------FGTFDLAQLSTQESTYPYVNLIAAAFLLAFAVKTPLFPFHA 220 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGA 302 WLPD + QA T+G++ L+G+L K YG++R L LFP+ ++P + L + G+ YGA Sbjct: 221 WLPDTYYQASTSGTILLSGLLSKAGIYGIIRIGLGLFPHVMKAWSPWLLGLAITGVLYGA 280 Query: 303 WMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQL 362 A+ Q D KRL+AY+S SH+ F+LI ++ +A +GA++Q HG++ LF++ G L Sbjct: 281 LAAWRQNDFKRLLAYSSFSHVNFILIGLFIFDPIAQKGAILQAFNHGITITALFLVAGYL 340 Query: 363 YERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVIT 422 R+ + GL M L L+ FF ++++ +PGT NFVGE +I G F P +T Sbjct: 341 ENRLGFTIIGTSKGLARYMPNLCWLTFFFVLSSIALPGTNNFVGELLIFIGLFGKHPYLT 400 Query: 423 VISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYP 482 ++ +VF+ +Y L + + YF + + ++ +E ++ L+ L + +G YP Sbjct: 401 ALTGLTIVFSVIYMLRWMQKMYFEEPSPY--QVQWIDLTKKEFLIVAPLIFLNLWIGLYP 458 Query: 483 QPILDTSHS 491 IL + Sbjct: 459 MGILKYLDA 467 >UniRef50_D2PVJ1 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PVJ1_9ACTO Length = 519 Score = 311 bits (797), Expect = 4e-83, Method: Composition-based stats. Identities = 169/493 (34%), Positives = 242/493 (49%), Gaps = 34/493 (6%) Query: 24 GVKVPRWIALITMGLTLALSLQLWLQG------------------GYSLTQSAGIPQWQS 65 G ++ + GL LA S+ LW+ + G Q + Sbjct: 27 GDRIAALYGSVISGLVLAGSVVLWVGYLRRPRGAGTLEAGVIDSDSADRGEVPGRLQSWA 86 Query: 66 EFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEK--YQGFFHLNLMWI 123 E D+ WIP + HLA+D +SL +++L+ LL L L S + + L+ I Sbjct: 87 ETDLTWIPALDVRFHLAVDAISLPLILLSALLVFLCCLYSLRITPRIGRTRSLIALLLVI 146 Query: 124 LGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGL 183 GVIG F A D+ LFF F+E++L+PM+ +I +WG D R AAT F + T Sbjct: 147 ETGVIGTFAAADLVLFFLFFEVVLIPMWLIIDVWGDHH-DRAGRRRAATTFVLMTVLGSA 205 Query: 184 VMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGW 243 VML+ L + Y G + G + + AVKMP+ PLH W Sbjct: 206 VMLVGFLLV----YRQAGTFDLELLGQDPVTGGHGAALAAAILIALGLAVKMPLWPLHIW 261 Query: 244 LPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAW 303 LPDAH++APT GSV LAG+LLK +YGL+R LP+ P+A+ AP + I G+ Sbjct: 262 LPDAHAKAPTVGSVLLAGVLLKLGSYGLVRILLPVLPDATVTIAPYLAGFSTVAIVAGSL 321 Query: 304 MAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLY 363 AQTD+KRLIAY+SV HMGF+ + I T S GA+ IAHGL LF L G + Sbjct: 322 ACLAQTDVKRLIAYSSVGHMGFIGLGIATLSPEGVAGALFANIAHGLITGLLFFLAGAIK 381 Query: 364 ERIHTRDMRMMG-GLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ------ 416 +R T ++R +G L++++ + L F +A+LG+PG F GE + L G+F+ Sbjct: 382 DRHDTSELRAIGRALYARLPRISVLLTFACLASLGLPGLAGFWGEMLALMGAFRPADGLP 441 Query: 417 --VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVL 474 V+ VI+ G V + Y L ++ G A+ +S EL LVVL Sbjct: 442 RTTYLVLMVIAGLGTVLTAAYFLRLVRNLCQGDPAEYPATAFAVDLSRIELVAWAPLVVL 501 Query: 475 LVLLGFYPQPILD 487 V+LG P +LD Sbjct: 502 TVVLGLCPWLLLD 514 >UniRef50_C7P4L7 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Halomicrobium mukohataei DSM 12286 RepID=C7P4L7_HALMD Length = 522 Score = 310 bits (794), Expect = 1e-82, Method: Composition-based stats. Identities = 152/479 (31%), Positives = 241/479 (50%), Gaps = 33/479 (6%) Query: 3 LPWLILIPFIGGFLCWQTE-RFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 + L+ + +G + + R+ K ++ I + ++ + + Sbjct: 4 VAALLAVTLLGAIATFLVDDRYAAKFATAVSTIPLVGSVWMYYVYLTEYQGVGNALLSPD 63 Query: 62 QWQSEFDMPWIPRFG--ISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLN 119 + WI G I + +DG+S+ ++ LTG+L LA++ SW I++ Q F+ Sbjct: 64 TVAFRQTIDWIELGGYTIQYSVGLDGVSMPLLALTGILTTLALVSSWTPIDERQSQFYGL 123 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 ++ + +IGVF A+D F +F FWE +L+PMY LI +WG G R AA KFF+YT Sbjct: 124 MLLMEVSLIGVFSALDFFFWFVFWEGVLIPMYLLIGVWG-----GPRRKYAAIKFFVYTN 178 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSS-----------GVEYLLMLGFF 228 + LVM + ALVF ++ + T E+ ++ ++ L + F Sbjct: 179 VASLVMFVGFFALVFSLGDS--IATLGLPEITQALVAGEMGSLAGIAVADLKLLAFVLMF 236 Query: 229 IAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAP 288 + FAVK+PV PLH WLPDAH +APT SV LAG+LLK Y LLRF+ + + + Sbjct: 237 VGFAVKVPVFPLHTWLPDAHVEAPTPVSVMLAGVLLKMGTYALLRFNFTMLSDVATGSVL 296 Query: 289 IAM-----WLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVI 343 M +GV + YGA +A AQ D+KR++AY+S+S MG+V++ + + GA Sbjct: 297 AIMPVAIAVIGVFSVIYGALLALAQRDLKRIVAYSSISSMGYVILGLVAFTPHGMGGATF 356 Query: 344 QMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGN 403 QMI+HGL + +F+ G +Y HTR + M GL +M W + + A +G+P Sbjct: 357 QMISHGLISGLMFMAVGVIYNETHTRMVGDMSGLADRMPWTVGIFVSAAFGYMGLPLMSG 416 Query: 404 FVGEFMILFGSF-------QVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQ 455 F E I GSF + PV+T I+ FG+V + Y L + R FG + + + Sbjct: 417 FAAEVFIFLGSFGATDTLGTLAPVLTSIAMFGIVIVAGYLLWAMQRTLFGGYELETDYE 475 >UniRef50_C9RKX5 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKX5_FIBSS Length = 504 Score = 309 bits (793), Expect = 1e-82, Method: Composition-based stats. Identities = 142/506 (28%), Positives = 238/506 (47%), Gaps = 20/506 (3%) Query: 6 LILIPFIGGFLCWQTERFGVKVPRWI----ALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 + ++P + C K R I A I + + L+ ++ G +A Sbjct: 9 IWVLPLLTVLACVLIPATYEKTLRTIHVTSATIVLAIVCYLTYAIYALSGTPTDPAAAPL 68 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 + D+PW+ F + DGL++L++ LT + VL S K I+ Q F + Sbjct: 69 ALRFFTDIPWLSMFNAHYIVGADGLNMLLLALTAFIVWAGVLVSLK-IKGNQKIFFALIQ 127 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + V GV+++ D+ LFF F+EM + MY +IA +G R K + Sbjct: 128 LLATSVYGVYMSFDLVLFFVFYEMEALCMYLMIACYGSG-----KRDYGGKKLTLTLAFG 182 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 ++L + L F +G ++N E+ T + + F+ FAV + P H Sbjct: 183 SSMILATLFGLYF----ESGATSWNLIEIAKTTLPMDFQMWAFPLMFMGFAVSSSLFPFH 238 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 W PD HS APTA S+ AG+++K AYG LR ++ L P A+ + P + L + + G Sbjct: 239 FWSPDGHSAAPTAVSMLAAGVMMKMGAYGCLRVAMFLMPEAAKIWLPYVVALLIFNVVLG 298 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 ++A D+K + AY+S+SH+G + + + + + +GA +QMI+HG F G Sbjct: 299 PFIAIRHKDLKYITAYSSISHLGLIFLGLAALTPIGLRGASLQMISHGFLTGLFFATIGM 358 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ----V 417 +YER HTRD+ MGG+ KM +L + A LG+PG F+ E I G+FQ + Sbjct: 359 IYERTHTRDITEMGGIMRKMPFLGVGFVLAGFAGLGLPGFSGFIAESTIFIGAFQQDSTL 418 Query: 418 VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVL 477 ++T+++ + +VY L +R G + S L RE +I++LV L+ Sbjct: 419 TRIVTILAILSITTTAVYILQTANRMLHGPLPQKYES--LTDGCFREKLVIVVLVACLLF 476 Query: 478 LGFYPQPILDTSHSAIGNIQQWFVNS 503 +G P I + +I I + ++ Sbjct: 477 IGVCPGWISELLDQSIAPIFEKISSA 502 >UniRef50_UPI00003837CC COG1009: NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI00003837CC Length = 758 Score = 309 bits (793), Expect = 1e-82, Method: Composition-based stats. Identities = 118/502 (23%), Positives = 211/502 (42%), Gaps = 39/502 (7%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTL--ALSLQLWLQGGYSLTQSAG 59 LL ++PF+G L V +A + +L L+L L GG S+ + Sbjct: 6 LLAAAAILPFLGSVLAGALPSRARNVAAALAGLVTLTSLGCILALTPQLAGGSSVVHA-- 63 Query: 60 IPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIE--KYQGFFH 117 + W+P G+ L +DGL+ L VL +G L VL + + Sbjct: 64 ---------IDWLPSLGVRFVLRLDGLAWLFSVLVLAIGALVVLYARYYMSPADPVPRLF 114 Query: 118 LNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIY 177 + +G ++G+ L+ ++ FWE+ + + LI W D A Sbjct: 115 AYFLAFVGAMLGIILSGNLIQLVLFWELTSIVSFLLIGYW----YDNAAARDGARMSLTI 170 Query: 178 TQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTP---MSSGVEYLLMLGFFIAFAVK 234 T A GL +L+ + + + V +++ E +L + +S + ++ K Sbjct: 171 TAAGGLCLLVGTILIGRI------VGSYDLETVLASGDTIRNSSLYLPALVLVLAGALTK 224 Query: 235 MPVVPLHGWLPDAHSQAPTAGSVDL-AGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWL 293 P H WLP A + APT S L + ++K + ++R L + + I + Sbjct: 225 SAQFPFHIWLPRAMA-APTPISAYLHSATMVKAGIFLMIRLWPVL--AGTDAWYWIVGTI 281 Query: 294 GVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAA 353 G+ + G+W A Q D+K L+AY+++SH+G + + + S LA A+ + H A Sbjct: 282 GMATMLIGSWSAIFQHDLKGLLAYSTISHLGLITLLLGLDSPLAVVAAIFHTVNHATFKA 341 Query: 354 GLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMIL-- 411 LF+ G + TRDMR + GLW M + L++ A A G+P F+ + M L Sbjct: 342 SLFMAVGIIDHETGTRDMRRLSGLWRAMPYTATLAMVAAAAMAGVPLLNGFLSKEMFLSE 401 Query: 412 ----FGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFM 467 G + + V++T F +YSL + + +FG+ + + + Sbjct: 402 AVDNMGDHPIHLALPVLATLASAFTMLYSLRFIRQTFFGRPPHDLPEEPHEPVRW-MRIP 460 Query: 468 ILLLVVLLVLLGFYPQPILDTS 489 I +LV+ + +G P + + Sbjct: 461 IEMLVLTCIAIGLVPNLTIGPA 482 >UniRef50_C9RWL8 Proton-translocating NADH-quinone oxidoreductase, chain M n=7 Tax=Geobacillus RepID=C9RWL8_GEOSY Length = 525 Score = 308 bits (790), Expect = 3e-82, Method: Composition-based stats. Identities = 173/525 (32%), Positives = 258/525 (49%), Gaps = 34/525 (6%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGG--YSLTQSA 58 M L L+ P +G L + ++ +W+ L L+L ++Q G + L + Sbjct: 2 MFLSLLVFSPLLGIMLLMFVRKTDERMIQWLGTAATVPPLILALFAFIQSGRGFRLERLD 61 Query: 59 GIPQWQSEFDMPWI--PRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFF 116 W D+P++ + I L IDGLSL+ +VLT +L LA L S + +G+F Sbjct: 62 EARDWVRLTDLPFLTDAAYVIRYELGIDGLSLVFIVLTAVLATLAALASMLVKTEKKGYF 121 Query: 117 HLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFI 176 L L+ + G++GVF A + FF F E+ LV M+ L+ WG G R AA + + Sbjct: 122 -LWLLALEIGMLGVFSAANFVWFFLFLEVTLVAMFLLVGKWG-----GFERERAAYSYLL 175 Query: 177 YTQASGLVMLIAILALVFVHYNATGVWTFNY------EELLNTPMSSGVEYLLMLGFFIA 230 Y ++L+ I L+ A E L P+++ L+ G +A Sbjct: 176 YNGLGSALLLVVIAVLLARTGTANFALLHEMLHNPAAEGQLIAPLTAEGRRWLLGGLLLA 235 Query: 231 FAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIA 290 FAVK+P VP H WL H +AP + AG+LLK AAYG++RF + LFP+ FA + Sbjct: 236 FAVKLPAVPFHRWLIRVHVEAPPPVVMLHAGVLLKIAAYGMIRFGVGLFPDEFRSFAGVL 295 Query: 291 MWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGL 350 GVI + YGA +A Q ++KR++AY+SVSHMG VLI + ++ QGAV Q +AHGL Sbjct: 296 ALFGVINVLYGALLALRQRELKRVLAYSSVSHMGVVLIGLGALNEAGIQGAVFQSVAHGL 355 Query: 351 SAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMI 410 +A F+L G L R+ T D+ GGL M L A+A LG+PG FVGEF Sbjct: 356 ISALSFLLVGVLAHRMGTTDINRFGGLTKAMPLFSGYLLTAALALLGLPGLAGFVGEFTS 415 Query: 411 LFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIAS---------------- 454 G FQ P + + GL+FA+VYSL + FG+ + Q + Sbjct: 416 FLGLFQTKPALAAVGALGLIFAAVYSLKAVLDITFGRPRDQREAVMGWREPQASAASLGE 475 Query: 455 --QELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQ 497 + + +E +LV L+V +G YPQ + + + + Sbjct: 476 PQGGVVDLQGKEAVPAFILVALIVAVGVYPQLLAAPLTAVVKTMM 520 >UniRef50_C1F221 NADH dehydrogenase I, M subunit n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F221_ACIC5 Length = 543 Score = 308 bits (790), Expect = 3e-82, Method: Composition-based stats. Identities = 156/537 (29%), Positives = 250/537 (46%), Gaps = 51/537 (9%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L WL +PF G F R + R +A++ +L +L LW+ A Sbjct: 7 LTWLTALPFAGAFAVLALSR-NRALARALAILIAVASLLGTLALWVHFN------AASSG 59 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMW 122 Q E W G++ H+ IDGL LL++VL+ ++ +++++ SW +F L +++ Sbjct: 60 MQFEQQYAWASSIGLTYHVGIDGLGLLLLVLSAIVVLMSLIASWSNPAHGPVYFAL-VLF 118 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 + G+ G F A++ +F +WE+ L+P +FL+ WG G R A+ +FF+YT Sbjct: 119 LECGLFGTFTALNFLHWFLYWELTLIPAFFLVRQWG-----GAKRAQASLQFFLYTMVGS 173 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLN------------------TPMSSGVEYLLM 224 + +L+A LAL TF++ L S + LL Sbjct: 174 VALLVAFLALYLA------AGTFDFLALAQWAHQGQLTAALQQQFAWTGWSGSSLALLLF 227 Query: 225 LGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASA 284 F+ FAVK PVVP H WLP +++A + ++ L G + K YG LR LP+FP Sbjct: 228 WAVFLGFAVKTPVVPFHTWLPATYAEASSETTMLLTGAMSKMGVYGFLRILLPIFPEQMQ 287 Query: 285 EFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGS---------- 334 + +WL + I A A+AQ D+KR AY+SV+H+G+ ++ I + Sbjct: 288 QMLTPLLWLALASIVLPALAAWAQRDLKRTFAYSSVNHLGYCVLGICVVARFTGADPSLL 347 Query: 335 ---QLAYQGAVIQMIAHGLSAAGLFILCGQLYERI-HTRDMRMMGGLWSKMKWLPALSLF 390 A G ++Q+ +HGL+AA LF L R R + GGL + L Sbjct: 348 LEKSAALTGVLLQIFSHGLTAAALFWFVALLERRNQGKRALTDFGGLRKIVPVFCGLMGI 407 Query: 391 FAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKS 450 A+LG+PG F GEF+I G F + ++ GL+F +V+ LA+L R +FG + Sbjct: 408 AIFASLGLPGLNGFPGEFLIFKGVFPLAGWAAALALLGLLFTAVFLLAVLQRVFFGPMRE 467 Query: 451 QIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNSVTTT 507 +P ++ E F ++ L+++LGFYPQ I + + T Sbjct: 468 SQQQAPMPDLTAAERFAFAPVIALMLVLGFYPQLIAGKMTGTVAQWTAPQAAPLQTA 524 >UniRef50_Q37375 NADH-ubiquinone oxidoreductase chain 4 n=2 Tax=Eukaryota RepID=NU4M_ACACA Length = 497 Score = 308 bits (790), Expect = 3e-82, Method: Composition-based stats. Identities = 142/441 (32%), Positives = 235/441 (53%), Gaps = 11/441 (2%) Query: 53 SLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKY 112 +++ A + +F W+ + + +D +SLL ++LT L + +L SW I+ Sbjct: 61 NISVLAEFDIYNFQFYKQWLFLYNFHYVIGMDNISLLFLLLTFFLTPICILISWNSIKYR 120 Query: 113 QGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAAT 172 F + L++I + +F +D+ F+ F+E +L+PM+ LI +WG + + +I A Sbjct: 121 YNSFIICLIFITFILFNIFCVLDLVFFYIFFESILIPMFILIGVWGSR----QRKIHAVY 176 Query: 173 KFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFA 232 + F YT L+ML+ IL + + + T + L NT S + +L FF AF Sbjct: 177 QLFFYTLLGSLLMLLGILVIY------SHIQTTDIRVLYNTNFSFYRQLILWASFFFAFC 230 Query: 233 VKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMW 292 VK+P+ P H WLP+AH +APT GSV LAG+LLK YGLLRF +P+F +A+ F P+ Sbjct: 231 VKVPLFPFHIWLPEAHVEAPTVGSVILAGVLLKLGTYGLLRFVIPIFCDATYFFLPLVYT 290 Query: 293 LGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSA 352 L ++GI Y Q D+K++IAY SVSHM FV++ ++T + G+V M++HG+ + Sbjct: 291 LCLLGIIYTCCSTIRQVDLKKVIAYASVSHMSFVILGLFTSNIQGIGGSVFLMLSHGIVS 350 Query: 353 AGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILF 412 +GLF G +Y+R TR +R GL S M ++ + PGT +F+GEF+IL Sbjct: 351 SGLFFCIGCVYDRYKTRILRYYSGLVSTMPIFSLCLFILILSNISFPGTSSFIGEFLILL 410 Query: 413 GSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLV 472 G F+ +I+TF ++ +VYS+ + +R F + S +E + + Sbjct: 411 GLFENNHFAALIATFSIILTAVYSIWLYNRIIFNRLVVNY-YLRFSDFSKKEFVVGFIFC 469 Query: 473 VLLVLLGFYPQPILDTSHSAI 493 + +L G I+ + + Sbjct: 470 FITILFGLKGSYIISLIEAPL 490 >UniRef50_Q0FXW0 NADH dehydrogenase subunit 4 n=3 Tax=Alphaproteobacteria RepID=Q0FXW0_9RHIZ Length = 500 Score = 306 bits (785), Expect = 1e-81, Method: Composition-based stats. Identities = 168/502 (33%), Positives = 262/502 (52%), Gaps = 28/502 (5%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L ILIP + + + R +AL L+ + +W+ + P Sbjct: 1 MLTLSILIPLLASLGLFGWSNVTKEKARLVALGASTLSFLCLIIVWIGFDTG----SEAP 56 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 +QS ++ WI G++ + +DG+SL + +++GLL L + E + ++ + Sbjct: 57 AFQSVAEVGWIDALGVAWRVGVDGMSLAVSLMSGLL-FLCSIAWPAETKGRARQYYGWFL 115 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 ++ G +G+FL++D+ +F+ F+++ LV MYFLI WGH ++ AA KFF+YT A Sbjct: 116 FLQGVSLGLFLSLDLLVFYVFFDLTLVGMYFLIGRWGHDQAE-----YAALKFFVYTLAG 170 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGV---EYLLMLGFFIAFAVKMPVV 238 L +L+AIL LV A G TF+ EL+ G L++ GF + FA+K P+V Sbjct: 171 SLAILLAILGLVL----ANGTLTFDIRELIAVQPLGGTDLRSSLILFGFLVGFAIKTPLV 226 Query: 239 PLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 P H WLP AH +AP S LAG+LLK YG++R + A +A + ++ I Sbjct: 227 PFHTWLPLAHVEAPGPASAVLAGVLLKMGTYGMVRIPFQMMRETFAAYAFPLAIVALVAI 286 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQ---------LAYQGAVIQMIAHG 349 +G+ +A AQT++KR IAYTSV+HMG+ ++ I LA GAV +M+AHG Sbjct: 287 LWGSLVALAQTNLKRRIAYTSVNHMGYTVLGIAAAGAMIGSESVRTLALSGAVTEMVAHG 346 Query: 350 LSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFM 409 L LF++ G Y R T D+ GGL L A A+ G+PG FV EF Sbjct: 347 LITGALFLIAGSFYTRAGTYDLSRFGGLARLTPLLMVAYFLAAFASFGLPGLAGFVAEFQ 406 Query: 410 ILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMIL 469 I GSF V P++ I GLV + L M +FG+ K +IA+ + + E++ + Sbjct: 407 IFAGSFGVYPIVAAIGLLGLVITAALFLMMGQTIFFGETKPEIAA--IKDLKPAEIWPLA 464 Query: 470 LLVVLLVLLGFYPQPILDTSHS 491 +L+VL+VL+G P +LD + Sbjct: 465 VLLVLVVLIGIAPGWLLDLIQT 486 >UniRef50_B0R3V0 NADH dehydrogenase-like complex subunit M n=9 Tax=Halobacteriaceae RepID=B0R3V0_HALS3 Length = 519 Score = 306 bits (785), Expect = 1e-81, Method: Composition-based stats. Identities = 161/508 (31%), Positives = 257/508 (50%), Gaps = 22/508 (4%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 M++ L+ + + + ++ +A L + S+ +++Q S Sbjct: 1 MMIEALLGVTLLSALVVMLAP---DRIAGKLAAGLSLLPVVGSVWMFVQFDGSGNALLEG 57 Query: 61 PQWQSEFDMPWI--PRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHL 118 E WI + ++ H+ IDG+S+ +VVL+ +L LA+ +W I++ Q F+ Sbjct: 58 GSLAFETMTHWITIGPYTLNWHVGIDGISMPLVVLSTVLTTLAITSAWTPIDERQSQFYA 117 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 ++ + ++GVF A+D F++F FWE +LVPMYFLI +WG G R AA KFF+YT Sbjct: 118 LMLLMEASLLGVFTALDFFVWFVFWEFVLVPMYFLIGIWG-----GPRRKYAAIKFFVYT 172 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPM-------SSGVEYLLMLGFFIAF 231 + L+M I +ALVF T + + + ++ + FI F Sbjct: 173 NVASLLMFIGFMALVFGLDVTTMDMPAIAQAIHAGQFGTTYGLGAETLKTVAFFAMFIGF 232 Query: 232 AVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAM 291 AVK+P VPLH WLPDAH QAPT SV LAG+LLK Y LLRF+ + P + ++A Sbjct: 233 AVKVPTVPLHTWLPDAHVQAPTPASVMLAGVLLKMGTYALLRFNFTMMPGIAQQYAVPIA 292 Query: 292 WLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLS 351 L V+ + YGA +A AQ D+KR++AY+SVS MG+V++ + + GA QM+AHGL Sbjct: 293 ALAVLSVIYGAMLALAQRDLKRIVAYSSVSSMGYVILGLVAYNYYGVGGATFQMVAHGLI 352 Query: 352 AAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMIL 411 + +F+ G +Y HTR + + G+ KM A+ + A +G+P F GE I Sbjct: 353 SGLMFMCVGVIYNTAHTRMVGDLSGIADKMPVTAAVFIAAAFGYMGLPLMAGFAGELFIF 412 Query: 412 FGSFQV----VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFM 467 G F + T ++ FG+V + Y L + R FG ++ +P L + Sbjct: 413 LGGFGADFAHAQLFTALAMFGIVIVAGYLLFAMQRVLFGPFAAETDYDIVPAA-LHDTVP 471 Query: 468 ILLLVVLLVLLGFYPQPILDTSHSAIGN 495 I+ L++L+++ G P A+ Sbjct: 472 IVALLLLVIVAGTVPNVFYGMIQDAVTP 499 >UniRef50_Q950R4 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Spizellomyces punctatus RepID=Q950R4_SPIPN Length = 470 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 164/491 (33%), Positives = 261/491 (53%), Gaps = 28/491 (5%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L L+LIP + W + +V + AL + LA +L + Sbjct: 1 MLEILLLIPALSIVTVWLYCKVAQEVV-FTALAFSIINLAHTLLIVHFFD------GSTA 53 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 +Q + GI IDG+SL ++ LT +L + +L SWK + F + L+ Sbjct: 54 AFQFQ-------SLGI---FGIDGISLWLIFLTNMLMPIVILSSWKAVNIMVKPFIILLL 103 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 I VF+ +D+ LF+ +E +L+PM+FLI +G + +I AA +FF+YT Sbjct: 104 LIGFWSNAVFMVLDLLLFYISFEGVLIPMFFLIGFYGGRN----RKIHAAYQFFLYTLFG 159 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 L++ +A++ L T +Y+ LL P+S +Y+L L FFI+ A+K+P++P+H Sbjct: 160 SLLLFLALIVLYLE------TGTTDYQVLLTIPISQNRQYILWLAFFISLAIKIPMIPVH 213 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLP+AH +APTA SV LA ILLK +YG LR+ +PLFP+ S F P+ + ++ I Y Sbjct: 214 IWLPEAHVEAPTAASVILAAILLKLGSYGFLRYVIPLFPDGSTYFTPLVCTMCILAIIYS 273 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 + AQ D K++IAY+S+ HM IA++T V +I+HGL ++ LF+L G Sbjct: 274 SVACLAQVDAKKIIAYSSIGHMNTATIALFTNDYHGLSAGVYFLISHGLISSALFLLIGV 333 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 LY+R HTR ++ GL M L L F++A + +PGT F+ EF+ G+ + P I Sbjct: 334 LYDRYHTRTIKYYRGLVMIMPVFTVLFLIFSLANVAVPGTSGFISEFLTFLGALNLNPFI 393 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 V ++ +V A Y+L HR +G + + S ++ +EL ++L L+ L G Y Sbjct: 394 AVSASIAIVLAPAYALWFFHRVSYGSFSTYLPSL-YQDVTAKELHLLLPLLFFTFLFGIY 452 Query: 482 PQPILDTSHSA 492 PQ I + H + Sbjct: 453 PQLIFEPLHMS 463 >UniRef50_B4U8I0 Proton-translocating NADH-quinone oxidoreductase, chain M n=3 Tax=Aquificaceae RepID=B4U8I0_HYDS0 Length = 501 Score = 305 bits (781), Expect = 3e-81, Method: Composition-based stats. Identities = 161/497 (32%), Positives = 266/497 (53%), Gaps = 16/497 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 L+ +L+P + L K + IA I +T +SL +S + Sbjct: 10 LISISMLVPIVTTILIIFFP---EKFTKPIAFIGSLVTFLISLYTLKFLDFS-----HLS 61 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI--EKYQGFFHLN 119 + P I GIS + +DGLS + +L+ + LA+ S K+I + ++ Sbjct: 62 NIYLYENYPIIKELGISYVVGVDGLSEVFYILSTFISFLAIAWSVKDIQIKSRLKEYYSM 121 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 + +IGVF A D+ LF+ F+E+ LVPM F+I +WG+K R+ +A KFFIY Sbjct: 122 FLLTTTFLIGVFTAWDLILFYIFYELTLVPMIFVIGVWGYKL-----RLYSAYKFFIYIF 176 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 S L +L I+ L + TG + Y L++ + + L L FFIAFAVK P+VP Sbjct: 177 ISSLFLLFGIMILSADSFKQTGHFNAFYPTLVHLHLPLNEQIFLFLLFFIAFAVKTPLVP 236 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 H WLPDAH +APTAGSV LA ILLK +Y LRF++ LFP A+ + +++G++ I Sbjct: 237 FHTWLPDAHGEAPTAGSVVLAAILLKMGSYAFLRFNIGLFPEAAKHLWLVMVFIGILTII 296 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 Y +WM AQ +IKR +AY+SVSHMGF++ A++ + ++ +V++M AHG S+A LF++ Sbjct: 297 YASWMTIAQNNIKRFVAYSSVSHMGFIVAAMFMLNFQGFRASVLEMAAHGFSSASLFMIA 356 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP 419 G +Y R+H+ + + + G M L + +G+PG +F G+F+ + + + Sbjct: 357 GFIYNRLHSFNTKTIAGSVRYMPIFSILVALTGFSAMGLPGGSSFWGKFLTIVSAKEHSL 416 Query: 420 VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLG 479 + +I F+++Y L L + + K++ + + +L ++L LVVL+ +G Sbjct: 417 DLALIVIVSAFFSAIYMLYFLRNLFL-EGKTEGSFLIFTDIRGIKLTVMLSLVVLMFTIG 475 Query: 480 FYPQPILDTSHSAIGNI 496 +P + ++I N+ Sbjct: 476 LFPFLFFNIFDASISNM 492 >UniRef50_Q5EM42 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Mortierella verticillata RepID=Q5EM42_9FUNG Length = 495 Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats. Identities = 157/496 (31%), Positives = 259/496 (52%), Gaps = 23/496 (4%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L L IP IG + + + I L + + +SL +W + + + + Sbjct: 1 MLTALFFIPLIGALSLLFVNK-NESLMKRITLGSTIINFVISLVIWGKFDNNTHEYQFVQ 59 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 +W ++ IDG+SL V+LT L + +L SW + + LN + Sbjct: 60 EWAEISFC--------HFNVGIDGISLFFVLLTTFLFPIIILTSWDH-KNNLKSYLLNFL 110 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + +I F+ +D+ LF+ F+E +L+P++ +I +G D T+ A F+YT Sbjct: 111 ILESLLIATFIVLDLLLFYIFFESILIPLFIIIINFG----DLLTKEKAGFLLFLYTLFG 166 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 L M L+ + T +++ L + V+ LL +GF IAF VK P++P H Sbjct: 167 SLFM------LLSIITILILTGTTDFQILSTIDFGTDVQKLLFVGFLIAFIVKTPLIPGH 220 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WL AH AP GSV LAG++LK A Y LR +P P+A+ F P+ L VI I Y Sbjct: 221 IWLGFAHVAAPIGGSVLLAGVILKLATYLALRVMIPFLPDATLYFTPLIYTLAVISIIYA 280 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG- 360 + D+K +IAY+SVSHMG V++ +++ + +GAVI +AHG+ + LFI+ G Sbjct: 281 SLTCLRLIDVKAIIAYSSVSHMGVVVLGLFSNNLQGIEGAVILGLAHGVISPLLFIIVGD 340 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 LY R HTR ++ G+ + M L + F +A + P +GNF+GEFM G+FQ P+ Sbjct: 341 ILYTRSHTRIIKYYRGIATSMPILSLIFFFATLANIATPFSGNFIGEFMSFAGAFQQNPI 400 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 + ++ G+ + YS+ + +R FG A +++ +P +S RE F++L L+++ +LG Sbjct: 401 MAILGATGIFLGTGYSIWLFNRISFGTASRYMST--MPDISRREFFVLLPLIIVSFILGI 458 Query: 481 YPQPILDTSHSAIGNI 496 YP +LD+ H I ++ Sbjct: 459 YPNVVLDSLHLGISSL 474 >UniRef50_O21047 NADH-ubiquinone oxidoreductase chain 4 n=3 Tax=Dictyostelium RepID=NU4M_DICDI Length = 540 Score = 301 bits (772), Expect = 3e-80, Method: Composition-based stats. Identities = 131/423 (30%), Positives = 208/423 (49%), Gaps = 11/423 (2%) Query: 24 GVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAI 83 K R L G+ + LS + + + + P I+I +I Sbjct: 29 NQKFQRIFILGVQGILIVLSGIMLIGCEGTDIINRISPYINMVTVYS--NNVNINIGYSI 86 Query: 84 DGLSLLMVVLTGLLGVLAVLCSWKEI-EKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFF 142 DG+S + + LT +L + L S + I EK + F + L+ +I F A D+ + Sbjct: 87 DGISAIFIFLTIILILSCNLISIRVIKEKTEQKFQIMLLLTEILIINFFAATDLVQLYIV 146 Query: 143 WEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGV 202 +E L+PM +I +WG + AA + IYT + ML++I L Y+ G Sbjct: 147 YEATLIPMVIMIGVWGSRTEKKI----AAFQILIYTLIGSIFMLMSIGIL----YSTLGT 198 Query: 203 WTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGI 262 + + V L+ +GFFI FAVK+P+ PLH WL AH +APTAGSV LAGI Sbjct: 199 TDYIMIREYIDVLPENVRKLIFIGFFIGFAVKIPIAPLHLWLLRAHVEAPTAGSVLLAGI 258 Query: 263 LLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSH 322 LLK YG +R+++ LFP+ + PI + +I I Y Q D+KR++AY+S+SH Sbjct: 259 LLKLGGYGYIRYNIGLFPDLCEYYFPIIGGICLISILYTGIATLTQLDVKRIVAYSSISH 318 Query: 323 MGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMK 382 M +++ +++G +G +I MI HG+ + GLF+ G +Y+R TR + L M Sbjct: 319 MNVIVLGLFSGVLQGIEGGIILMIGHGVVSGGLFLCIGVIYDRCKTRIVYAYNNLVHVMP 378 Query: 383 WLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHR 442 + L + + P T NFVGE +I G + +I S ++ ++YS + +R Sbjct: 379 IMAILFFLLVLGNIAFPITSNFVGELLIFIGLIKKNIIIAFFSALSMIVTAIYSFWLYNR 438 Query: 443 AYF 445 +F Sbjct: 439 IFF 441 >UniRef50_D1A432 Proton-translocating NADH-quinone oxidoreductase, chain M n=7 Tax=cellular organisms RepID=D1A432_THECD Length = 496 Score = 301 bits (771), Expect = 6e-80, Method: Composition-based stats. Identities = 156/449 (34%), Positives = 239/449 (53%), Gaps = 25/449 (5%) Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEK--YQGFFHLN 119 + Q EFD W P + HL +DG+SL +V+LT LL L ++ + + + + Sbjct: 55 RMQLEFDRAWAPAIDLRFHLGVDGVSLPLVLLTALLTFLCLVYTLRHPPQGGSARLLIAS 114 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 ++ + G++G F+A+D+ LFF F+E++L+PMY +IALWG G R AA KF +YT Sbjct: 115 VLVLEVGMLGTFVALDLLLFFVFFEVVLIPMYLVIALWG-----GAGRRAAAWKFILYTL 169 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTP---MSSGVEYLLMLGFFIAFAVKMP 236 + L L + T T + L P ++ + + A+K+P Sbjct: 170 L------GSGLLLAGLLVVGTNAGTLDMTALAEAPGQGLTRTAQITAFALIGLGLAIKVP 223 Query: 237 VVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVI 296 + PLH WLPDAH++APT GSV LAG+LLK YGL+R +LP P + +AP + VI Sbjct: 224 MWPLHTWLPDAHTEAPTIGSVLLAGVLLKMGTYGLVRIALPAAPEGAVVWAPWLGLMAVI 283 Query: 297 GIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLF 356 GI YGA AQ D+KRLIAY+S+ HMGFVL+ I T + + A++ IAHGL LF Sbjct: 284 GIVYGALACLAQRDLKRLIAYSSIGHMGFVLLGIATLTPVGVNAALLGNIAHGLITGLLF 343 Query: 357 ILCGQLYERIHTRDMRMM-GGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSF 415 L G + +R T ++ + GG+ +K L + F +VA+LG+PG F GE + L G++ Sbjct: 344 FLAGGVKDRYGTGELDSLGGGMLTKAPLLASFLTFASVASLGLPGLAGFWGEMLALLGAY 403 Query: 416 --------QVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFM 467 + + G V + Y L +L + G LPG++L E Sbjct: 404 RPAEALPRETFVTFMAVGALGAVLTAAYFLRLLAKITHGPVAEHRRRDALPGLTLAEYAA 463 Query: 468 ILLLVVLLVLLGFYPQPILDTSHSAIGNI 496 + LV L +L+G +P+ +LD + + + + Sbjct: 464 WVPLVALTLLVGLWPKLLLDLTTAPVTAL 492 >UniRef50_C1F222 NADH dehydrogenase I, M subunit n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F222_ACIC5 Length = 525 Score = 300 bits (770), Expect = 6e-80, Method: Composition-based stats. Identities = 170/511 (33%), Positives = 259/511 (50%), Gaps = 31/511 (6%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L W I F+G T + + RW+AL+T + L+L LQ Sbjct: 16 LAWTIYASFLGAAAVLLTPQSRPQFTRWVALLTSLVGFVLTLGAVLQYQP--------GS 67 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMW 122 D WIP+ GI LA DG+SL +++LTGL + +L SW IE F + Sbjct: 68 LLVVADSTWIPQLGIRYTLAADGISLTLLLLTGLAAMAGILFSWN-IEHRTREFFAFYLV 126 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKAS-DGKTRITAATKFFIYTQAS 181 ++GGV GVFL+ D+FL F F+E+ ++P YFLIA+WG + D + R AA K +Y+ A Sbjct: 127 LIGGVYGVFLSFDLFLLFVFYEIAIIPKYFLIAIWGSAPNGDTRPRQYAAMKLALYSFAG 186 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 ++LI ILA + A+G T N L + P S + F+ FAV + P H Sbjct: 187 SALVLIGILA----AWAASGSQTLNLAVLAHYPFSQHFQMWAFPLVFVGFAVLAGLWPFH 242 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFA----------PIAM 291 W P H+ APTA S+ LAG+++K AYG LR ++ LFP A + + Sbjct: 243 TWAPTGHAAAPTAASMLLAGVVMKLGAYGCLRVAMMLFPLGLAPWGFHILGLGSWRDVFA 302 Query: 292 WLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLS 351 L +I I YGA +A Q D K +I Y+SVSHMGFVL+ + T SQ+ GAV+QM +HG+ Sbjct: 303 LLALISIVYGASVALVQRDFKFVIGYSSVSHMGFVLLGLMTLSQIGIDGAVLQMFSHGII 362 Query: 352 AAGLFILCG-QLYERIHTRDMRMMGG--LWSKMKWLPALSLFFAVATLGMPGTGNFVGEF 408 A LF + G +Y+R HTRD+ +G L + + A+A++G+PG F+ E Sbjct: 363 AGLLFAVVGRMVYDRTHTRDLAALGPMHLSRALPFAAITFTLAAMASVGLPGFSGFIAEL 422 Query: 409 MILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYF----GKAKSQIASQELPGMSLRE 464 ++ G ++ +P + G++ ++ L R +F LP ++L E Sbjct: 423 QVILGVWRSMPWMVFAVALGILIGVAFTWRALTRVFFPAAQSDEPPAPIEHPLPPITLPE 482 Query: 465 LFMILLLVVLLVLLGFYPQPILDTSHSAIGN 495 LLL+ +++G YP ++ ++ + Sbjct: 483 RAGALLLLTATIIVGLYPHILMRLILPSLQS 513 >UniRef50_B7HY49 NADH dehydrogenase (Ubiquinone), M subunit n=71 Tax=Bacillus cereus group RepID=B7HY49_BACC7 Length = 500 Score = 300 bits (770), Expect = 7e-80, Method: Composition-based stats. Identities = 164/505 (32%), Positives = 265/505 (52%), Gaps = 20/505 (3%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQL--WLQGGYSLTQSA 58 +LL + I P +G L T + + R + L L +++ L G SL+ Sbjct: 4 LLLTFFIFSPLLGILLLTLTPKKESRTVRALGLFGTVLPFGMAIVLACTYASGKSLSLFD 63 Query: 59 GIPQWQSEFDMPWIPR--FGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFF 116 +W D + + F I L IDGLSL+M+VLT LL +LA + ++ I++ F Sbjct: 64 EKVKWIKFGDFAAVDKRWFSIYYELGIDGLSLVMMVLTALLAMLAAIAAFT-IKRNLKAF 122 Query: 117 HLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFI 176 ++ L+ + G++GVF A ++ LFF F+E+ L PM+ LI WG +S+ AA + I Sbjct: 123 YMLLLMLEIGMLGVFAAQNLMLFFIFFEITLPPMFLLIGKWGKLSSE-----KAAYSYLI 177 Query: 177 YTQASGLVMLIAILALVFVHYNATGVWTF-----NYEELLNTPMSSGVEYLLMLGFFIAF 231 Y ++LI + +++F T + + + + +++ L L IAF Sbjct: 178 YNGIGSAILLI-VFSVLFAKTGTTNITELKEILTSVGAGGGMAVPNSLQFGLFLSIMIAF 236 Query: 232 AVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAM 291 A+K+PV PLH W+ + H +A A + AG+LLK AYG++RF LFP EFA + Sbjct: 237 AIKLPVFPLHRWMVNVHIEAHPAVVMLHAGVLLKIGAYGIIRFGQGLFPEYFREFATLIA 296 Query: 292 WLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLS 351 LGVI + YGA++A QTD ++++AY+S+SHMG VL+ + + QGA+ Q+++HGL Sbjct: 297 ILGVINLLYGAFLALIQTDFRKVLAYSSISHMGIVLMGLAALNAPGTQGALFQVVSHGLI 356 Query: 352 AAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMIL 411 AA LF L G + +R T ++ +GGL + L L +A+LG+PG FV EF+ Sbjct: 357 AALLFFLLGVIEQRFGTSNITALGGLAKSVPVLSGFFLAGGMASLGLPGMSGFVSEFLAF 416 Query: 412 FGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLL 471 G FQ PVI G++ +VY L + FGK + + + + E ILLL Sbjct: 417 LGLFQAEPVIAAAGVLGIILTAVYVLRATLQVTFGKKEWEAKA----DIHGWEYVPILLL 472 Query: 472 VVLLVLLGFYPQPILDTSHSAIGNI 496 + ++ +G P+ + D + + + Sbjct: 473 IFCIIAIGVMPEILGDPLQNTLKTL 497 >UniRef50_Q85JB2 NADH-ubiquinone oxidoreductase chain 4 n=4 Tax=Monoblepharidales RepID=Q85JB2_9FUNG Length = 457 Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats. Identities = 151/412 (36%), Positives = 232/412 (56%), Gaps = 20/412 (4%) Query: 79 IHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFL 138 + L IDGLSL+++VLT L + ++ + L L+ I ++ VFL +D+ + Sbjct: 58 MALGIDGLSLVLIVLTTFLMPICLIV--------EPELVLPLLAIEALLMAVFLVLDVMI 109 Query: 139 FFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYN 198 F+ +E +L+P+++L+ + R++AA F+YT L+MLI+I L Sbjct: 110 FYLCFESVLIPLFYLMGKY----QGRARRLSAALSLFLYTLGGSLLMLISIGLLYLE--- 162 Query: 199 ATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVD 258 T N + LL P+ + LL LGFFIAFAVK+P++P H WLP+AH ++PT GS+ Sbjct: 163 ---ASTTNLQALLTVPIHPDYQLLLFLGFFIAFAVKIPMIPFHLWLPEAHVESPTGGSIL 219 Query: 259 LAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYT 318 LAGILLK YG LRFS+PLFP AS + P L +IGI Y A Q D+K++IAY+ Sbjct: 220 LAGILLKLGGYGFLRFSIPLFPYASDYYQPFVALLALIGIVYAGLTAIRQIDMKKIIAYS 279 Query: 319 SVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLW 378 SV+HM ++ I+ + L +G++ M+AHGL + LF G LY+R HTR +R GL Sbjct: 280 SVAHMNLAMLGIFANNLLGIEGSIHMMVAHGLVSGALFYCVGLLYDRYHTRLVRYYRGLA 339 Query: 379 SKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLA 438 M LFF ++ + PG+ NF+ EF++ G + P + +I++ GL+ + YS+ Sbjct: 340 IYMPLFAIFFLFFTLSNVAFPGSANFIAEFLVFTGLMDINPFLALIASTGLLLTATYSMW 399 Query: 439 MLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSH 490 + +R FG S I+ + ++ + F + L +L G P ILD H Sbjct: 400 LYNRVCFGATTSYIS--KFNDLTKADTFCLSALAFTTLLFGLKPNLILDLIH 449 >UniRef50_C6V5H6 NADH-quinone oxidoreductase chain m n=2 Tax=Neorickettsia RepID=C6V5H6_NEORI Length = 471 Score = 299 bits (767), Expect = 1e-79, Method: Composition-based stats. Identities = 149/412 (36%), Positives = 233/412 (56%), Gaps = 16/412 (3%) Query: 79 IHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFL 138 I L D LS +M++LT LL +L V+ + + + L + + FLA D+ Sbjct: 76 ITLKADELSCVMLLLTSLLTMLCVIMA----KDKSPGYFGLLFLLEFVLAVFFLATDLLT 131 Query: 139 FFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYN 198 F+ +E+ L+P++F+I LWG GK R+ AA K F+YT + LI+IL L Sbjct: 132 FYITFELSLIPIFFIIGLWG-----GKKRVYAAFKIFLYTLFGSVGFLISILYLFAELGT 186 Query: 199 ATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVD 258 + L+ + + L+ + FF+AFAVK+P+ PLH WLPDAH QAPT GSV Sbjct: 187 LEIS---SLVYLVENTIPIAAQKLIWIAFFLAFAVKIPMFPLHTWLPDAHVQAPTEGSVM 243 Query: 259 LAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYT 318 LAG+L+K YG+L+ LP+FP+ S EF+ + + L I + Y + +A AQTDIK+LIAY+ Sbjct: 244 LAGVLIKLGTYGMLKVLLPIFPSLSREFSTLVLSLSAIAVIYTSLVALAQTDIKKLIAYS 303 Query: 319 SVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLW 378 S++HMG V ++ + Y+GAV QM++HGL ++GLF G +Y+R TR + G+ Sbjct: 304 SIAHMGIVTAGLFAFNIEGYKGAVFQMVSHGLVSSGLFFCIGSIYDRSATRQIADHSGIM 363 Query: 379 SKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLA 438 + L + F++A +G+PGT FVGEF+ L G FQ ++ G+V + Y L Sbjct: 364 NFAPKLGFAFVLFSLAAIGLPGTAGFVGEFLALTGLFQSRETFAILCATGVVLGACYMLY 423 Query: 439 MLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSH 490 + R +G + +I + L E ++ L++L++ LG +P +L+ Sbjct: 424 LCKRIIWGTPEGKI----FRDIHLHESIPLITLIILVMFLGLHPSLLLNFLR 471 >UniRef50_B2XX63 NADH-ubiquinone oxidoreductase chain 4 n=3 Tax=Dictyosteliida RepID=B2XX63_9MYCE Length = 535 Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats. Identities = 136/460 (29%), Positives = 227/460 (49%), Gaps = 15/460 (3%) Query: 40 LALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGV 99 L + + +L Y+ D + I+I +IDG+ ++ + LT LL V Sbjct: 77 LFVIVATFLTIEYTYLTDFEKIGMVFNSDYIYTGMLNINIGSSIDGIGIIFIWLTTLLIV 136 Query: 100 LAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGH 159 VL SW +++ + + L I +I +F ID+ F+ +E +L+P+ +I++WG Sbjct: 137 SCVLISWTVVKEEVKMYMILLFIIEILLINLFGVIDLIHFYIIYESILIPIVIMISIWGS 196 Query: 160 KASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGV 219 + AA + F+YT + ML AI + ++ G + + +S Sbjct: 197 REEKKI----AAYQIFVYTLIGSIFMLSAIGYIYYM----FGTTDYFIIKEGIWTLSDIE 248 Query: 220 EYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLF 279 + LL +G FI FAVK+P+VPLH WL AH +APTAGSV LAGILLK YG LRF++ LF Sbjct: 249 QKLLFIGLFIGFAVKIPMVPLHLWLLRAHVEAPTAGSVLLAGILLKMGGYGFLRFNVGLF 308 Query: 280 P-NASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAY 338 N F P + +I I Y Q DIK++IAY+S+SHM V++ I++ + Sbjct: 309 SSNILDFFFPYITVICIISILYTGIATILQLDIKKIIAYSSISHMNVVVLGIFSQNIQGI 368 Query: 339 QGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGM 398 +G+V M++HG + LF+ G +YE+ +R + L M + +A + Sbjct: 369 EGSVFLMVSHGFVSGSLFLCIGMIYEQTKSRMLYSYNNLAVVMPNYAIIFFLLTLANIAF 428 Query: 399 PGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYF--GKAKSQI---- 452 P T +F+GE +I G + + G++ YS + +R +F G Q+ Sbjct: 429 PITSSFIGELLIFVGVMKANIIAAFFGGMGMIITVFYSFWLYNRLFFDNGMLDEQVKFLN 488 Query: 453 ASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSA 492 + ++ RE ++L ++ + +LG P +L+ H + Sbjct: 489 KKGKFRDINEREFASVVLPLIGVGVLGVAPNVLLNIIHMS 528 >UniRef50_A0AL63 Complete genome n=20 Tax=Bacillales RepID=A0AL63_LISW6 Length = 802 Score = 298 bits (764), Expect = 4e-79, Method: Composition-based stats. Identities = 124/532 (23%), Positives = 226/532 (42%), Gaps = 48/532 (9%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L IL+PFI L R+ +V ++ + + L Y LT Sbjct: 4 LHLAILLPFIVALLIPLFYRWTKQVHTGWLVLPIPVIL---------FIYFLTFIPKTMH 54 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF---FHLN 119 + MPWIPR GI+ + +DGLSLL +L +G L S + K + F+ Sbjct: 55 EATIVSMPWIPRLGINFTVVVDGLSLLFALLITGIGSLVTFYSIYYLGKKKERLSNFYTF 114 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 L + ++GV L+ ++ + + FWE+ + + LI W H+ + A K + T Sbjct: 115 LFMFMTAMLGVVLSDNLIVLYLFWELTSISSFLLIGYWYHR----ERSRYGARKSMMITV 170 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 GL+ML + L + + + ++++ + + M+ + K VP Sbjct: 171 FGGLMMLGGFILLHIMSDSFSIRAIIQNADIISH---NSLFIPAMILVLLGAFTKSAQVP 227 Query: 240 LHGWLPDAHSQAPTAGSVDL-AGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 H WLPDA +APT S L + ++K Y + RF+ PLF ++ F +++ G+ + Sbjct: 228 FHIWLPDAM-EAPTPVSAYLHSATMVKAGIYIVARFT-PLFASSGVWFWTVSLV-GITTL 284 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQ-------------LAYQGAVIQM 345 F+G+ A + D+K ++AY+++S +G ++ + G+ +A AV + Sbjct: 285 FWGSLNATKKNDLKAILAYSTISQLGMIMALLGVGAASLHFDTLSDDIYVMAIVAAVFHL 344 Query: 346 IAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFV 405 H LF++ G + TRD+R +GGL M ++ A G+P F+ Sbjct: 345 FNHATFKGSLFMMVGIVDHETGTRDIRRLGGLMRIMPITATIAFIGTFAMAGIPPFNGFL 404 Query: 406 GEFMILFGSFQVVP-----------VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIAS 454 + M + ++ V++ VF VYS+ + + + GK K + Sbjct: 405 SKEMFFESMINITHLQLFDASTWGILLPVVAWVASVFTFVYSMIIFFKTFTGKVKPFLLP 464 Query: 455 QELPGMSLRELFMILLLVVLLVLLGFYPQPILDTS-HSAIGNIQQWFVNSVT 505 ++ L ++L + +VL+G +P I A+ I + Sbjct: 465 KKPHEAPFGLLLPPIILSIFVVLIGLFPNLIAKPILEPAVRAIVPGLATDFS 516 >UniRef50_A9B486 Proton-translocating NADH-quinone oxidoreductase, chain M n=4 Tax=Chloroflexi (class) RepID=A9B486_HERA2 Length = 565 Score = 297 bits (762), Expect = 6e-79, Method: Composition-based stats. Identities = 159/558 (28%), Positives = 258/558 (46%), Gaps = 63/558 (11%) Query: 2 LLPWLILIPFIGGFLCWQTER--FGVKVPRWIALITMGLTLALSLQLWLQGGYSL---TQ 56 + + L P +G L + + W + L L+L LWL GG++ + Sbjct: 13 ITTLIALSPLVGMLLALVFPKPAENSRTIAWGVFAWSLVPLGLTLFLWLSGGFNPALASV 72 Query: 57 SAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFF 116 + Q + W+P F + +DGL+ +V LT L + +L +++ I+ Q + Sbjct: 73 AGDQAMIQQVDRVRWVPFFNADYFVGLDGLNFPLVFLTTALTPVCILAAFR-IKHRQNVY 131 Query: 117 HLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFI 176 ++ + ++G F++++ L F FWE LVPM+F+I WG G+ R AA KFF+ Sbjct: 132 LALMLLLESAMLGYFVSLNFLLLFLFWEFSLVPMFFIINNWG-----GENRRYAAFKFFV 186 Query: 177 YTQASGLVMLIAILALVFVHYN----------------------ATGVWTFNYEELLNTP 214 YT A + ML+ + G + L + Sbjct: 187 YTMAGSVAMLLIFEFIYLATGTFDLVVLSRLGQGLPVDPALLAPKLGAGYTSGATLQSML 246 Query: 215 MS---------------SGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDL 259 S ++ F+AFAVK+ V PLH W PD + APT+GS+ + Sbjct: 247 FSAVEDIGLTSILGTSNGTPAAIVFWSIFVAFAVKLAVWPLHTWQPDTYENAPTSGSMIV 306 Query: 260 AGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTS 319 + ++ K AYG++R + LFP + FAP L + I +GA+ AQ ++KRLIAY S Sbjct: 307 SAVMSKMGAYGMIRIMIMLFPQQTKFFAPALAILALASILFGAYAGLAQINLKRLIAYAS 366 Query: 320 VSHMGFVLIAIYTGSQLA---------------YQGAVIQMIAHGLSAAGLFILCGQLYE 364 ++HMG+VL+ + + A G QM+AHG S A LF L G+LYE Sbjct: 367 INHMGYVLLGLAAVASAAPESLGDLAVNIRASAMNGVQAQMVAHGFSTAALFFLAGELYE 426 Query: 365 RIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVI 424 R T + GGL M + A LG+PG FVGEF I G++ PVIT I Sbjct: 427 RTGTYQLDQFGGLRKVMPIFAGIMGVAMFANLGLPGLAGFVGEFFIFRGAWGTQPVITTI 486 Query: 425 STFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQP 484 + GL+ ++ + M + ++G ++ + + + L L+++L++ G +P+P Sbjct: 487 AVLGLIVTALVLIRMYQKIFYGPVNHKLTNLPDIKVGDWAFNVTLPLIIVLLVFGIFPKP 546 Query: 485 ILDTSHSAIGNIQQWFVN 502 ++D S+ A + Q F N Sbjct: 547 LMDLSNYAATVMAQVFTN 564 >UniRef50_Q52978 Probable K(+)/H(+) antiporter subunit A/B n=110 Tax=Bacteria RepID=PHAAB_RHIME Length = 999 Score = 297 bits (762), Expect = 6e-79, Method: Composition-based stats. Identities = 127/506 (25%), Positives = 216/506 (42%), Gaps = 35/506 (6%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL IL+PF G + W A +AL L G Y S G+ Sbjct: 31 LLSVFILVPFAGSLIAIFFPSDQRGAISWFA-----GAIALVCFLVTAGLYPYVASGGVL 85 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI--EKYQGFFHLN 119 ++ + W+P G++ L +DG + L L +GVL L + + E F Sbjct: 86 HYR----IDWVPELGLNFTLRMDGFAWLFSALITAIGVLVALYARYYMAEEDPVPRFFAL 141 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 + +G ++GV L+ ++ L FWE+ + + LI W H A A T Sbjct: 142 FLAFMGSMLGVVLSGNLILLAVFWELTSIVSFLLIGYWHHNAHARDGARMA----LTITG 197 Query: 180 ASGLVMLIAILALV-FVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 GL M + ++ + V + + + N P+ V L++LG K Sbjct: 198 TGGLAMFVGLIIIGKIVGSYELDAVLASGDAIRNHPLYGTVLVLVLLGAL----TKSAQF 253 Query: 239 PLHGWLPDAHSQAPTAGSVDL-AGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 P H WLP A + APT S L + ++K + L+RF + + + I G+ Sbjct: 254 PFHFWLPHAMA-APTPVSAYLHSATMVKAGVFLLVRFWPVM--AGTEAWFWIVGLAGLTT 310 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 + GA+ A Q D+K L+AY+++SH+G + + + GS LA AV ++ H A LF+ Sbjct: 311 LLLGAYFAIFQQDLKGLLAYSTISHLGLITVLLSLGSPLAAVAAVFHIVNHATFKASLFM 370 Query: 358 LCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV 417 G + TRD+R +GGL+ M L++ + A G+P F+ + M + + Sbjct: 371 AAGIIDHESGTRDIRRLGGLFHFMPITATLAMVASAAMAGVPLLNGFLSKEMFFAEAIET 430 Query: 418 V------PVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLL 471 V ++T +FA YSL +H +FG+ + + ++ + L Sbjct: 431 HLVNPLDTVTPYVATIAGMFAVTYSLRFIHGVFFGRPPADL-PRKPHEPPRWMRAPLDFL 489 Query: 472 VVLLVLLGFYPQ----PILDTSHSAI 493 V+ +++G P P L T+ ++ Sbjct: 490 VLACLVVGIIPAQTIGPFLHTAVLSV 515 >UniRef50_B2A694 NADH dehydrogenase (Quinone) n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A694_NATTJ Length = 748 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 125/515 (24%), Positives = 226/515 (43%), Gaps = 53/515 (10%) Query: 2 LLPWLI-LIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 +LP LI +P +G F K+ +I + L L ++ + Q Sbjct: 14 ILPILIIFVPLLGSFGVILISSVSEKLRDIYTVIISAVPLVLLAVMYPLVQQGIVQ---- 69 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI--EKYQGFFHL 118 +++ W I + +D L L L L+ LA L + + I E + F+ Sbjct: 70 ------YNIEWF--LEIGLIFRLDSLGFLFTALISLIWFLATLYATEYISHEHNRNRFYF 121 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 ++ G +GVF+ D+F F F+EMM + Y L+ + K + A F Sbjct: 122 FWLFTFGATLGVFVTGDLFGLFVFFEMMSLTSYVLVI-----HEEDKDAMRAGNLFLFLG 176 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEY-LLMLGFFIAFAVKMPV 237 GL +L + + F + T +L +++GV +L+L F I F +K + Sbjct: 177 IGGGLAILFGLFIMYF------NLETLEIAPMLGDMVAAGVNIPVLLLLFIIGFGIKAGI 230 Query: 238 VPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAE-----------F 286 VPLH WLP AH APT S L+G+L+KT YGL R L + AS++ + Sbjct: 231 VPLHIWLPKAHPVAPTPASAILSGLLIKTGVYGLWRVFLMVMGPASSQEVELYQQYITNW 290 Query: 287 APIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTG------SQLAYQG 340 W+G+I + GA MA QT K+++AY+SVS +GF+++ + + + G Sbjct: 291 GMGLFWIGIITMVLGALMALLQTSAKKMLAYSSVSQVGFIIMGLGAAVYLGTDGPIGFAG 350 Query: 341 AVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPG 400 ++ +I H L A LF++ G ++ R H D+ + G++ +M ++ + A+ G+P Sbjct: 351 GIMHVINHALFKACLFLIVGAIFIRTHLLDIDRVRGMFKQMPFMGIAFIIAALGIAGVPL 410 Query: 401 TGNFVGEFMILFGSFQVVPVITV--------ISTFGLVFASVYSLAMLHRAYFGKAKSQI 452 + + ++ +V + I F Y + + + GK + Sbjct: 411 FNGYASKTILHHALSEVSYLTPGTAMFIADKIFVFTSALTVSYFIKLFRGLFLGKLPQEW 470 Query: 453 ASQELPGMSLRELFMILLLVVLLVLLGFYPQPILD 487 + ++ ++ + VVL++ +G +P +L+ Sbjct: 471 QNTNFS-VAPIIKVVVSVFVVLIIAIGVFPNFVLE 504 >UniRef50_B1ZBB1 Proton-translocating NADH-quinone oxidoreductase, chain M n=5 Tax=Proteobacteria RepID=B1ZBB1_METPB Length = 492 Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats. Identities = 169/507 (33%), Positives = 253/507 (49%), Gaps = 29/507 (5%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L IL+P + G R + R +AL LTL ++ LW G Sbjct: 1 MLTATILLPLLTGLAVLALPRHRPGLVRRVALAGSVLTLGAAVVLWAGFD------PGAG 54 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q +PWIP G S + + GLSL +++LT +L + ++ E ++ + Sbjct: 55 GLQWRMTLPWIPSLGASYDVGVGGLSLALILLTAILLTVVMVYVLGEHDRAHAH-AFLFL 113 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + G+IG+F A D+ LF+ F+E+ LVPMYF++ +WG G+ R AA KFF+YT+A Sbjct: 114 LLATGLIGLFAAQDLLLFYLFFEVGLVPMYFIVGIWG-----GERRRYAALKFFLYTRAG 168 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNT---PMSSGVEYLLMLGFFIAFAVKMPVV 238 L ML+ L L Y A TF+ ++ + L+ L + F VK+PVV Sbjct: 169 SLAMLLGFLTL----YLAMEPHTFSLPAIVQARPLDRTPLAGGLVFLALLLGFGVKLPVV 224 Query: 239 PLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 PLH WLPDAH +APT GSV LAG+ LK YG+L LP P+ A F + + L + + Sbjct: 225 PLHNWLPDAHVEAPTEGSVVLAGLQLKMGGYGMLAVLLPTLPDTVARFGWLLVALALASL 284 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGS--------QLAYQGAVIQMIAHGL 350 YGA A AQTD+KRL+AYTSV+HMGFV + + + +LA GA +QM++HG Sbjct: 285 LYGALAALAQTDMKRLVAYTSVNHMGFVTLGVAVAALAGNEGVRRLALNGAAVQMVSHGF 344 Query: 351 SAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMI 410 G+F+L G L R TR++ GGL M L A +LG+PG F+ EF Sbjct: 345 LTGGMFLLVGMLQHRAGTRELARFGGLIGSMPAFSGLFGLLAFGSLGLPGLSGFIAEFQA 404 Query: 411 LFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILL 470 + + Q+ + ++ LV + L ++ G+A + + LP ++ E Sbjct: 405 IGAALQLSAWVAALAVLALVVTTAVYLRLVTGLLMGRAPPDMPA--LPPLTAAEAGSAGA 462 Query: 471 LVVLLVLLGFYPQPILDTSHSAIGNIQ 497 L VL + LG P ++ + Sbjct: 463 LAVLALGLGVLPSVLVALLDGTTAALA 489 >UniRef50_C7RLG1 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RLG1_9PROT Length = 504 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 162/492 (32%), Positives = 242/492 (49%), Gaps = 19/492 (3%) Query: 13 GGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWI 72 G L V + R +A I T+ + L ++Q PW Sbjct: 26 GAALLSLLPTRSVDLMRHLASIVAAATMLCACLLVADFD------PAGAEFQFFETRPWN 79 Query: 73 PRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFL 132 PR G + L +DG+SL MVVL LL +A++ S + +F L L+ +I VF Sbjct: 80 PRVGSHLALGLDGISLPMVVLATLLSFVAIVSSTGIRSGARLYFSLLLVLETSLLI-VFT 138 Query: 133 AIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILAL 192 A D LF+ WE+ L+P++FLI G G R AA F +YT + MLIA+L L Sbjct: 139 ARDWSLFYVCWELTLIPLFFLIDRLG-----GANRHRAALNFVLYTLGGSVFMLIALLLL 193 Query: 193 VFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAP 252 + + + L+ LG + F VKMP+VPLHGWLP AH +AP Sbjct: 194 Y--DAAPGHSFAMADMAAGGAELPVKTQILVFLGLLLGFGVKMPIVPLHGWLPLAHVEAP 251 Query: 253 TAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIK 312 + S+ L+GILLK AYGL+R + L P A L +I + YGA +A+ QTD+K Sbjct: 252 SPISILLSGILLKMGAYGLIRAAATL-PAAVQALQDWLALLALISLLYGAVLAWRQTDLK 310 Query: 313 RLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMR 372 +IAY+S+SHMG VL+ I + GAV QM+AHGL+A LF+L G LYER HTRD+ Sbjct: 311 AMIAYSSISHMGVVLLGIAALNPAGLSGAVTQMVAHGLAAGLLFLLIGLLYERTHTRDLG 370 Query: 373 MMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFA 432 G L +F +A++G+PG+ F+ E +L G++ V+ + G++ + Sbjct: 371 AYGSLNRSAPRFAVAIVFTLLASVGLPGSAGFMAELQVLVGAYARWGGWLVLLSIGILIS 430 Query: 433 SVYSLAMLHRAYFGKAKSQIASQ----ELPGMSLRELFMILLLVVLLVLLGFYPQPILDT 488 + Y+L + G + + + E LL+ ++ +GFYP P+L Sbjct: 431 AAYALRAIRCLSTGPERPFAGAAAGVTAFADLKRSESAAAGLLIAGILGIGFYPAPLLSL 490 Query: 489 SHSAIGNIQQWF 500 S++ + + Sbjct: 491 MASSVARLVRQV 502 >UniRef50_A9YMC4 NADH-ubiquinone oxidoreductase chain 4 n=17 Tax=Eumetazoa RepID=A9YMC4_HYDOL Length = 485 Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats. Identities = 157/451 (34%), Positives = 251/451 (55%), Gaps = 17/451 (3%) Query: 38 LTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGI-----SIHLAIDGLSLLMVV 92 ++L SL L L + + +Q ++ W+ I ++ +IDGLS+ + Sbjct: 31 ISLFWSLTLLLYFTLFFILNXKLSNFQFSLNINWLLINTIFINWNNLIFSIDGLSIFFIG 90 Query: 93 LTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYF 152 L+ LL + ++ S K I+ + F++ L + +IG+F +D+ F+ +E +L+P++ Sbjct: 91 LSILLIPICIVISLKSIKYFIKEFNILLFLSVILLIGIFSILDILWFYILFEGVLIPIFI 150 Query: 153 LIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLN 212 +I +WG++ + +I AA FF YT L+MLI+I + + T NYE LL Sbjct: 151 MIGIWGYR----EEKIKAAFYFFFYTLIGSLLMLISIFKIYSI------TGTTNYENLLI 200 Query: 213 TPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLL 272 + ++ L +GFFI AVK+P++P H WLP AH +AP AGS+ LAGILLK YGL+ Sbjct: 201 IKIPYNIQLWLFIGFFIGLAVKVPMIPFHIWLPQAHVEAPIAGSILLAGILLKLGGYGLI 260 Query: 273 RFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYT 332 RF P+FP AS + P+ + + +I I YGA Q DIKRLIAY+SVSHMG V I I++ Sbjct: 261 RFCYPIFPLASQFYNPLIIIISIIAIVYGALTTCRQIDIKRLIAYSSVSHMGLVTIGIFS 320 Query: 333 GSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFA 392 S G+++ MIAHGLS++GLFI+ +Y R H+R ++ GL M L ++ Sbjct: 321 HSIEGITGSILMMIAHGLSSSGLFIISAIIYFRFHSRIIKYFRGLTITMPILSVITFILI 380 Query: 393 VATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQI 452 +A + P T NF+ E ++ +F+ I ++ G+ +YSL + +R FG S + Sbjct: 381 LANISFPLTLNFIAELFLIISAFKFPLFIILLILMGVFINLIYSLWIYNRIXFGSNSSHL 440 Query: 453 ASQELPGMSLRELFMILLLVVLLVLLGFYPQ 483 E ++ L++L+++LGFYP Sbjct: 441 KFSR--DXINFEYQSLIPLIILIIILGFYPD 469 >UniRef50_A1API0 Proton-translocating NADH-quinone oxidoreductase, chain M n=2 Tax=Pelobacter propionicus DSM 2379 RepID=A1API0_PELPD Length = 534 Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats. Identities = 153/509 (30%), Positives = 275/509 (54%), Gaps = 27/509 (5%) Query: 1 MLLPWLILIPFIGGFLCWQTE-RFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAG 59 +L+ L +P +G K+ R ++ M L ++ ++ G + Sbjct: 6 LLILALFCLPLVGALAVPFLPASENGKIARMWGMLCMLAVLVMAGGIFAGFG-----TPC 60 Query: 60 IPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLN 119 +P + ++PW+ GI+ HLA+DGL++ +++LTGLL + + C WK E F Sbjct: 61 LPASLLDLNIPWVGSLGINFHLAVDGLNIYLLLLTGLLFPVVLGCCWKRPETQNNLFVAM 120 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 +++ ++G FLA ++ LFF FWE++L+PM+ ++ +G G+ + +AA FF+YT Sbjct: 121 ALFLEATLLGTFLAQNLMLFFVFWEVVLIPMFIIVLAFG-----GENKRSAAFTFFMYTM 175 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 A ++ L A++ + N TG W F + L+ + + + + +A A+K P+ P Sbjct: 176 AGSILFLAAVIMMGMESLNQTGAWNFEFAHLMALKLDWNTQLFVFIAVMLACAIKCPLFP 235 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 H WLP A+ +AP AG+ +AG L K A+G+++ +LPL P+ + F P M VI I Sbjct: 236 FHSWLPLAYYEAPPAGTALMAGALSKMGAFGIIKLALPLCPDVARAFGPTVMLFAVISIL 295 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 YGA +A QTD K+L+A++S+SHMG++++ I++ Q A GA+ Q+++HG++ AGLF+L Sbjct: 296 YGAIIALKQTDFKKLVAFSSLSHMGYIVLGIFSFHQAAIHGALFQILSHGVAVAGLFLLL 355 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ--- 416 G L R+ + + L + L + + F +A++ +P T F EF+ILFG+FQ Sbjct: 356 GLLELRLGREYLN-LTALSTHAPRLAVMLMLFILASVALPLTSGFTSEFLILFGAFQQGI 414 Query: 417 ---------VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFM 467 + ++++ G+V + Y L +G+ K + + MSL E Sbjct: 415 AALQANQGATMLTSVLLASTGMVLGATYMLRFGRAILYGQTKEGV---GVKDMSLMEGIG 471 Query: 468 ILLLVVLLVLLGFYPQPILDTSHSAIGNI 496 + L+V+++ +G P PI++ +A+ + Sbjct: 472 FIPLLVMIIWIGVNPMPIMNKVTTAVSAL 500 >UniRef50_A6Q8K1 NADH-quinone oxidoreductase, chain M n=3 Tax=Epsilonproteobacteria RepID=A6Q8K1_SULNB Length = 479 Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats. Identities = 157/492 (31%), Positives = 254/492 (51%), Gaps = 24/492 (4%) Query: 5 WLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQ 64 + P I G L + + ++IAL + L S L G Sbjct: 5 LFVFGPIILGSLMMLLGKKESGMAKYIALTLFAIMLFFSFALLSALPEEGYMDLGSWFAV 64 Query: 65 SEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWIL 124 +FD + L +D LS++M++LT L +L L SW K + L+ Sbjct: 65 RDFDFI--------LSLQVDRLSVVMLILTSALLILVTLSSWTM--KDPRNYFSLLVLFS 114 Query: 125 GGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLV 184 G + GVF++ ++ FF FWE+ LVPM+FL+ +WG + RI AA KFF+YT + ++ Sbjct: 115 GPIFGVFMSTNLLWFFIFWELTLVPMFFLVGIWGAEG-----RIYAAVKFFLYTHVASML 169 Query: 185 MLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWL 244 +L+A + Y TG+ F+ + +S+ V L+ FI FAVKMP+ P H WL Sbjct: 170 ILLAFFLI----YKETGI--FDMTMVKEAMLSTPV--LVWWLLFIGFAVKMPIFPFHTWL 221 Query: 245 PDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWM 304 PDAH QAP S LAG+LLK AY ++R + + P S FA + + LG++ +FY +M Sbjct: 222 PDAHVQAPAPVSALLAGVLLKMGAYAMIRMVVLMLPEQSEHFAWVILVLGLVTLFYAGFM 281 Query: 305 AFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYE 364 A +T +K+++AY+S+SHMG V +AI T S A+ +MI H L + LF++ G L+ Sbjct: 282 ALYETHLKKMVAYSSISHMGLVTVAIATLSYAGLSAALYEMIGHALIISPLFLIAGFLHS 341 Query: 365 RIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVI 424 R + M+ MGGL K +L A+ + +A LG+PGT F+GE IL + + + ++ Sbjct: 342 RTGSWQMKDMGGLMQKAPYLSAIFVLAGLAALGLPGTMGFIGELTILIAAIEQYGIGLIV 401 Query: 425 STFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQP 484 G + + Y + R +G+ KS + + M+ E +++ + ++ G +P Sbjct: 402 VALGSMIGAGYIIWTFRRVVYGE-KSALVEKSDFRMNRVEFAALIIFALGIIGFGLFPSV 460 Query: 485 ILDTSHSAIGNI 496 + DT ++A + Sbjct: 461 LFDTINAAFSML 472 >UniRef50_A0RME0 NADH-quinone oxidoreductase chain m n=1 Tax=Campylobacter fetus subsp. fetus 82-40 RepID=A0RME0_CAMFF Length = 495 Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats. Identities = 121/500 (24%), Positives = 247/500 (49%), Gaps = 19/500 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L +I +PFI G L F K + A + + L L L+ + + Sbjct: 7 ILSLIIFLPFIVGVLIALF--FNDKAGKLTAFVVSIVVAVLGLVLFFKFDPN-------A 57 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q + +P++GIS + +DG++L ++++ ++ + + N++ Sbjct: 58 GMQFVDSISLVPKYGISYLVGVDGINLYILLIITSAFPPLFF----ILKNRKKGYWANML 113 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 ++ G + V ++D+ F+ WEMML+P++ ++ ++G + R A Y Sbjct: 114 FMQSGFLSVVSSLDLVYFYAGWEMMLIPIFIMVGIYGKDSG----RAGALMDMMYYAIFG 169 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 ++ML AI+ + HY G ++F E+L+ ++S ++ +L F +AF +K+P+ P H Sbjct: 170 SMIMLGAIIYIGAAHYYEFGFFSFRLEDLIKVSLNSDLQTVLFFCFMLAFVIKLPLFPFH 229 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 W+ +A++++ T + L+ I K A + +LRF LPLFP + ++ + LG+ + Y Sbjct: 230 LWMSNAYTKSLTTATFMLSVIASKVAVFAILRFVLPLFPVSFVNYSTWFISLGLFSMLYF 289 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 A D K L+AY S SH+G ++ ++ A G++ Q++AH +++ +F+L G Sbjct: 290 GIAAIKVKDFKTLLAYASASHLGLIIAGVFALDVEAMTGSMYQVVAHAITSGIMFLLVGM 349 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 + E++ TR + +GGL K + ++++G+P T FVGE +I+FG F+ + Sbjct: 350 ISEQLGTRKISKLGGLAIKAPVFATIFAIAMISSVGLPATVGFVGELLIIFGLFKANLIY 409 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 + T +V ++Y + +A + + + RE+ L+ V ++ ++G Y Sbjct: 410 GIFGTTSIVIGAIYMFIVYRKAILQNTNE--LTAKFKDLRKREILAFLVAVAMIFIMGIY 467 Query: 482 PQPILDTSHSAIGNIQQWFV 501 P+P + + + ++ Sbjct: 468 PKPFIKQIEPTMNERYESYI 487 >UniRef50_C9RJZ1 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJZ1_FIBSS Length = 546 Score = 290 bits (744), Expect = 7e-77, Method: Composition-based stats. Identities = 144/492 (29%), Positives = 244/492 (49%), Gaps = 20/492 (4%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 MLL L+L PF+ L T + K +A++ MG+ + GG T + Sbjct: 1 MLLHLLVLAPFVAAILMVMTSKEDSKSSSRLAIL-MGIGFTAMSVALIAGGSVSTDAIEW 59 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 Q + +L GL+ MV L+ L +++++ + + F + + Sbjct: 60 FQIPGCKGP-------VYYYLTSHGLASWMVFLSSGLSLVSLISARGITCRSYRNFAIGI 112 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 ++G + G FLA D LFFFF+E M++P LIA +G GK R+ AA F IYT Sbjct: 113 FSLMGAMNGTFLAADAVLFFFFFEAMVIPAAVLIAGFG-----GKDRMKAAMTFAIYTLV 167 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 M++A+ ++ + N+T + + + G + +L++ F +AF VK P+ P Sbjct: 168 GSAPMMVALWYILTIADNSTLIS----LAVAVQGLPEGTQNVLLVCFLLAFLVKTPIFPF 223 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 HGW +++AP S L G + K +G + + LP+FP + + MWLG+ Y Sbjct: 224 HGWQAITYAEAPAPLSAILTGAMSKAGVFGFIVWILPIFPLSMNAVSG-LMWLGLFTAVY 282 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 GA MA TD K+L+A++S+ H+G + +++ S+ ++ ++AHG+SA F L G Sbjct: 283 GALMALRATDGKKLLAFSSMGHLGLAVAGVFSLSEAMLPAVLVLLVAHGISAGAQFYLMG 342 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 TR++ +GGL SK L F V L +PGT FVGEF +L + + P+ Sbjct: 343 IAERMAGTRELDQLGGLSSKNPVFSTLFGFAGVMALAVPGTAGFVGEFSVLLALWDMGPL 402 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 +++ F L+ ++ Y L + + FGK + +E E I ++++LL++ GF Sbjct: 403 PALVAGFTLILSAAYMLRFIQKVIFGKQAREY--EEGRRTMPLEGVSIAVMLLLLLVFGF 460 Query: 481 YPQPILDTSHSA 492 +P + DT + A Sbjct: 461 HPAYVTDTLNEA 472 >UniRef50_C2BM70 CPA3 family monovalent cation:proton (H+) antiporter-3 subunit A n=5 Tax=Corynebacterium RepID=C2BM70_9CORY Length = 993 Score = 290 bits (744), Expect = 8e-77, Method: Composition-based stats. Identities = 116/511 (22%), Positives = 212/511 (41%), Gaps = 38/511 (7%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 +LL LI + L + R ++ + + L + T S + Sbjct: 3 VLLGALIAASVVAPLLIMRMGRP------AFGILALVPSAGFVWTLVHFLRGTFTDSGAV 56 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIE---KYQGFFH 117 + + W+P +S L +DGL L ++ +G L ++ W + + F Sbjct: 57 ER-----TVEWMPSANLSFSLRLDGLGALFSLIILGMGALVLVYCWGYFDGTRRRLAMFA 111 Query: 118 LNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIY 177 ++ + G+ A + L + FWE+ + Y L++ + +AS + A + Sbjct: 112 AQMVGFATAMFGLVAADNFLLMYVFWEITSILSYLLVSYYAERASSRRAAQQA----LMV 167 Query: 178 TQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPV 237 T GL ML+ I+ L TG WTF+ + + ++ K + Sbjct: 168 TALGGLSMLMGIILLG----RQTGAWTFSDIAAYQHFAQTPFVTVAIVLILAGALTKSAI 223 Query: 238 VPLHGWLPDAHSQAPTAGSVDL-AGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVI 296 P H WLP A + APT S L + ++K Y + R + ++ A+ + + + LGV Sbjct: 224 APAHFWLPGAMA-APTPVSAYLHSAAMVKAGIYLVARLAPSMYEVAT--WHVVVISLGVF 280 Query: 297 GIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLF 356 + G WMA Q D+K ++AY +VS +GF+ GS+ A Q A+ AH L A LF Sbjct: 281 TMLLGGWMALKQRDLKLVLAYGTVSQLGFITSIAAVGSREAMQAALALTFAHSLFKAALF 340 Query: 357 ILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ 416 ++ G + TRD+ + GL K +L +++ ++ G+P FV + +L + Sbjct: 341 MVVGAIDHCSGTRDITKLSGLGRKEPFLFGIAIISGLSMAGVPPLFGFVAKEAVLEATMH 400 Query: 417 VVPV-------ITVISTFGLVFASVYSLAMLHRAYFGK-----AKSQIASQELPGMSLRE 464 + + V G + Y+L L A+ K + A ++ +++ Sbjct: 401 EELLAGMPRNMMLVAYVLGSILTMAYTLRFLWGAFATKQEVNGTEPAEAVAKMHPVTMGL 460 Query: 465 LFMILLLVVLLVLLGFYPQPILDTSHSAIGN 495 LL L V+LG +P+P+ + + Sbjct: 461 WLSPALLTALTVVLGVFPKPLSAAFDQHLNS 491 >UniRef50_B1ZRS1 Proton-translocating NADH-quinone oxidoreductase, chain M n=3 Tax=Verrucomicrobia RepID=B1ZRS1_OPITP Length = 509 Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats. Identities = 136/492 (27%), Positives = 239/492 (48%), Gaps = 13/492 (2%) Query: 4 PWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQW 63 P L+ I + +A + G+ L+L +W ++ Sbjct: 8 PLLVSIASPLALALAIAAGLPKRWSVRLAYVAFGIPALLALHVWWHFSAVPQENGYAFLT 67 Query: 64 QSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWI 123 + +GI + L ++G+SL + VL L+G+ A L + + + + + L+ + Sbjct: 68 NYPTGLS---AYGIGLKLGLNGISLPLFVLAALVGLAAGLYAIQSQAERLKIYLMLLLIM 124 Query: 124 LGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGL 183 GG++GVF ++D+F F+FF E+ L+P + ++ +WG G+ R AA K IY + Sbjct: 125 QGGLLGVFASVDVFFFYFFHELALIPTFIMVGVWG-----GRDRSYAAMKLTIYLTVGAM 179 Query: 184 VMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGW 243 + L+ ++AL + + + P+ ++ + F + + + P H W Sbjct: 180 LSLLGLIALYVKSGANSFDLITLRQYVAGQPLGETLQQNIFAVLMFGFGILVSLWPFHTW 239 Query: 244 LPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG-IFYGA 302 P + AP++ ++ AG+L K YGL++ +LPL P A ++ WL VIG + Sbjct: 240 APLGYGAAPSSAAMLHAGVLKKFGLYGLIQVALPLLPAGLAHWSHPLAWLAVIGNVLVVG 299 Query: 303 WMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQL 362 + AQ D+K++I Y+SV HMG+ + I GS L G V+ M+AHGLS A LF+L + Sbjct: 300 LITMAQRDLKQMIGYSSVMHMGYAFLGIAAGSTLGVGGVVMIMVAHGLSVALLFLLATSI 359 Query: 363 YERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVIT 422 + R HT M MGGL K L A A++G+PG NF GEF I ++ P+IT Sbjct: 360 HHRTHTFAMDEMGGLAQKTPVLAAFFTAATFASIGLPGFANFWGEFTIFIALWRFSPLIT 419 Query: 423 VISTFGLVFASVYSLAMLHRAYFGKAKSQIAS----QELPGMSLRELFMILLLVVLLVLL 478 ++ G++ +++Y L + +FG + +A+ + E L+L+ L+ + Sbjct: 420 ALAVSGIIISAIYGLRSVANVFFGAPTAALATVTAQHPPADLRWSEKVPALILLAALLFV 479 Query: 479 GFYPQPILDTSH 490 GF+P+ I + Sbjct: 480 GFWPKSISTPIN 491 >UniRef50_A8LTG8 NADH dehydrogenase (Quinone) n=58 Tax=Proteobacteria RepID=A8LTG8_DINSH Length = 969 Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats. Identities = 117/503 (23%), Positives = 212/503 (42%), Gaps = 28/503 (5%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L + L+PF+G + R G + L + L L +A Sbjct: 8 LFIIALLPFLGALVPGLMIRAGRTACASFTAVPTALAFIMLLILSPAVLRGEVITA---- 63 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI--EKYQGFFHLNL 120 ++ W+P+ G+S +DGL LL ++ +G+L +L + + + G F+ L Sbjct: 64 -----EIGWLPQLGLSASFFLDGLGLLFALMITGVGLLIILYARFYLSGDDPMGQFYTYL 118 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + G ++G+ L+ ++ L FWE+ + + LI W H + A T A Sbjct: 119 LLFQGAMLGIVLSDNILLLLIFWELTSLSSFLLIGYWKHLPEGRQGARMA----LAVTGA 174 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 GL M+ +L L + + + + +S ++ + K P Sbjct: 175 GGLAMIGGMLILGNIVGSYNLT---DILQAGEQIRASEWYLPALILILLGAFTKSAQFPF 231 Query: 241 HGWLPDAHSQAPTAGSVDL-AGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 H WLP A + APT S L + ++K + + R L + + I G++ + Sbjct: 232 HFWLPHAMA-APTPVSAYLHSATMVKAGVFLMARMWPVL--AGTDAWFYIVATTGLVTMV 288 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 GA +A + D+K L+A+++VSH+G + + + G+Q A AV +I H A LF+ Sbjct: 289 MGAGIALFKDDLKALLAFSTVSHLGLLTMLLGFGTQAAAVAAVFHIINHLTFKAALFMTA 348 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMIL-----FGS 414 G + HTRD++ +GGL M A+ A++ G+P F+ + M+L G Sbjct: 349 GIVDHETHTRDIKRLGGLRHLMPITFAIGTVAALSMAGIPLFNGFLSKEMMLEEASHTGW 408 Query: 415 FQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVL 474 V+ V++TFG + + YS + + G + ++ LLVVL Sbjct: 409 LGNPWVVPVVATFGALLSVAYSFRFIGHVFLGPVRDDYPAKP-HDPPFGMWASPALLVVL 467 Query: 475 LVLLGFYPQPILDTSHSAIGNIQ 497 ++++G P +A + Sbjct: 468 VLVIGMAPFVAEGIVTAASSAVT 490 >UniRef50_Q12ZH4 Na+/H+ antiporter subunit n=2 Tax=Methanosarcinaceae RepID=Q12ZH4_METBU Length = 513 Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats. Identities = 138/511 (27%), Positives = 227/511 (44%), Gaps = 21/511 (4%) Query: 5 WLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQ 64 L+ +P + L R V +W+ + + +S+ L LQ Q + +W Sbjct: 11 LLVAVPILMSALMIFL-RSNANVQKWLNVSVSLAMMLISIILLLQVWNGGIQVYEVGEWG 69 Query: 65 SEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQ--GFFHLNLMW 122 I L D LS MVVL+ ++ LA+L S IE +H Sbjct: 70 KY-----------GIVLVADLLSSGMVVLSSIVSFLALLYSLDYIEGRSLNSTYHSLFNL 118 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFL-IALWGHKASDGKTRITAATKFFIYTQAS 181 ++ G+ G FL D+F F F+E++L+ L IA + ++ A K+ I Sbjct: 119 LVAGLNGTFLTGDIFNMFVFFEILLLASCGLVIANEKGGVTKSSDKMEATFKYLILNMIG 178 Query: 182 GLVMLIAILALVFVHYNATGV-WTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 VMLIA+ +L + + Y + L F + F K + P+ Sbjct: 179 SFVMLIAVASLYATVGTLNMADLSVKISTMSAAGTLPWHIYAIALLFIVVFGNKAAIFPM 238 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H WLPD H AP+ S L+G+++K AYG+LR +F +A PI + L ++ I Sbjct: 239 HYWLPDVHPTAPSPISAMLSGVMIKVGAYGILRIFFLIFRDALFLLQPIIILLALVTIII 298 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 GA A Q D+K+L+AY+SVS +G+V + I GS A A++ M H ++ + LF+ G Sbjct: 299 GAVSAVGQNDVKKLLAYSSVSQIGYVFLGIGIGSVYALAAALVYMANHAIAKSMLFLTSG 358 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 + TRDMR MGG+ + L A++ G+P G FV +F++ + Sbjct: 359 GIIHHAGTRDMRHMGGMNKTSPIMSIAFLIGAMSIAGLPPMGGFVAKFILFDAGLRAEYY 418 Query: 421 ITV-ISTFGLVFASVYSLAMLHRAYFGKAK--SQIASQELPGMSLRELFMILLLVVLLVL 477 I V I+ F VF Y ++G+ + + SL I+ L L+ + Sbjct: 419 IPVAIALFFAVFTLFYMFRAWLLMFWGETRDVEEYGEYSSHKPSLMIALPIVSLAALVFI 478 Query: 478 LGFYPQPILDTSHSAIGNI--QQWFVNSVTT 506 G Y +P++ + + + Q ++++V T Sbjct: 479 FGVYAEPLIALAQAIAEQLIDPQPYIDAVMT 509 >UniRef50_A3THE8 Putative NADH dehydrogenase I chain M n=1 Tax=Janibacter sp. HTCC2649 RepID=A3THE8_9MICO Length = 497 Score = 287 bits (735), Expect = 7e-76, Method: Composition-based stats. Identities = 158/513 (30%), Positives = 240/513 (46%), Gaps = 38/513 (7%) Query: 1 MLLPWLILIPFIGGFLCWQT---ERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQS 57 M L ++L+P G W R +AL+ + ++ + Sbjct: 1 MALILMLLVP--GAVGLWLVTGGRALSASTARLVALVAASVGGVAAVAATV--------- 49 Query: 58 AGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI-------E 110 + D WIP G+ H +DG+S ++VLT ++GVL V SW E Sbjct: 50 -----MRPVVDRAWIPDLGVRWHFEVDGISAPLIVLTAVIGVLVVAHSWAEQPWADSPSS 104 Query: 111 KYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITA 170 + L+ + G + F A D LFF +E++LVPM+ LI+ +G R A Sbjct: 105 GSAATYLGALLLVETGALAAFSARDAVLFFIAFEIVLVPMWVLISRYG-DPHSAAKRADA 163 Query: 171 ATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIA 230 + +F +YT +ML+ IL LV A F +S G + L+ + + Sbjct: 164 SARFILYTAIGSTLMLVGILLLVTKARTA----DFAALPAAAASLSPGQQMLIAVLLTLG 219 Query: 231 FAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIA 290 AVK+PV PLH WLP AH+ APTAGSV LA +LLK YGL+R L P+ AP+ Sbjct: 220 LAVKVPVFPLHTWLPAAHTTAPTAGSVLLAAVLLKLGTYGLVRLPLASVPDGFTRIAPVL 279 Query: 291 MWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGL 350 GVIGI +G + + D+KRLIA++SV+HMGFV++ + +G++ Q A+I IAHG+ Sbjct: 280 AIAGVIGILWGGLICLVERDLKRLIAFSSVAHMGFVVLGLASGTETGLQAALIGNIAHGV 339 Query: 351 SAAGLFILCGQLYERIHTRDMRMMG-GLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFM 409 +A LF++ G L R + D+ ++ L L + A LG+PG F GEF Sbjct: 340 ISALLFVIVGGLKHRWGSVDLAVLRPALREVSPRLGFGLILGLAAGLGLPGLAGFWGEFT 399 Query: 410 ILFGSFQVVPVITVI------STFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLR 463 L ++ + V+ + G A+ YSL + + G + A P Sbjct: 400 ALIAAWNPIQHTGVLRTCAVIAAVGAALAAAYSLRVARIVWVGDEVAADAPDRAPDARGV 459 Query: 464 ELFMILLLVVLLVLLGFYPQPILDTSHSAIGNI 496 EL +I L V +V LG P + + A+ + Sbjct: 460 ELGVISALAVGVVALGVAPHLVFSVTSDAVTTL 492 >UniRef50_A6TVL4 NADH dehydrogenase (Quinone) n=2 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TVL4_ALKMQ Length = 694 Score = 286 bits (734), Expect = 1e-75, Method: Composition-based stats. Identities = 135/516 (26%), Positives = 232/516 (44%), Gaps = 56/516 (10%) Query: 3 LPWLIL-IPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LP L++ IP +GG + + + + T +TL L L ++ Q + Sbjct: 89 LPLLVIMIPLVGGPIEAYIGKKSENLRDMAVVDTTFVTLLLVLAMYPQ----------VA 138 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKE--IEKYQGFFHLN 119 Q + + +P G + +D LS +M G+L L + + IE ++ F+L Sbjct: 139 QGEMYYHLP--KLLGYGLSFKVDMLSFIMAATAGVLWFLVSIYAHDYMGIENHRNRFYLW 196 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 + GG++G +A D+F F F+E+M YFL+A + K I A + Sbjct: 197 MSVTFGGILGTVMAGDLFTMFLFFEIMTFSSYFLVA-----HNQSKESILAGNSYIYMGV 251 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIA-FAVKMPVV 238 A GL +L+ ++ L T + L + G LM G F+ F +K ++ Sbjct: 252 AGGLSILLGMILLYAY------TGTLEFIPLASEIKDLGWVKYLMTGLFVGGFGIKAGML 305 Query: 239 PLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLF--------------PNASA 284 PLH WLP AH APT S L+GIL+K AYG+LR S+ F S Sbjct: 306 PLHIWLPKAHPVAPTPASALLSGILIKVGAYGILRVSISFFVPSITEISGYADSLWEVSQ 365 Query: 285 EFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAV-- 342 + + +W+G+I + G +MA Q+++K+++AY S+S MG++++ I + L Y+GA+ Sbjct: 366 KLGAVIIWIGIITMVVGVFMALQQSNMKKMLAYHSISQMGYIVMGIGVATYLGYKGAMGF 425 Query: 343 ----IQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGM 398 M+ H L A LF++ G +Y R H DM +GG+W KM + L + A+ GM Sbjct: 426 SGGIYHMVNHALFKALLFMVVGLVYLRTHELDMYKLGGMWRKMPFTAFLCIIAALGITGM 485 Query: 399 PGTGNFVGEFMILFGSFQV-------VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQ 451 PG F + ++ + +I T + + + GK + Sbjct: 486 PGFNGFASKSILHHAIIEAYEYGHPSFRYAEMIFTVVSAGTVCSFIKLFSFVFLGKCPEK 545 Query: 452 IASQELPGMSLRELFMILLLVVLLVLLGFYPQPILD 487 +++ G + L ++++ +G P ++D Sbjct: 546 Y--KDIEGEKGMMDLAMGGLALMIIAVGQVPNFMMD 579 >UniRef50_Q609T5 Hydrogenase subunit n=1 Tax=Methylococcus capsulatus RepID=Q609T5_METCA Length = 748 Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats. Identities = 123/511 (24%), Positives = 208/511 (40%), Gaps = 44/511 (8%) Query: 23 FGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLA 82 ++P + L A + G L A + Q F +PW + H+ Sbjct: 96 HHRRLPHAWRRMVFALLTASGVSSLGAGLLQLHADAAVSG-QLPFGLPW-----LHWHVR 149 Query: 83 IDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM-----WILGGVIGVFLAIDMF 137 +D LS +V+ GL + A + ++ G + + + G+ GV +A D + Sbjct: 150 LDTLSAFFLVVLGLGVIAAGVYGPGYTRQFAGQYSFGALGLFTGSFVAGMEGVLIADDAY 209 Query: 138 LFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHY 197 LF WE M V YFL+ AS + AA + + + + +++A L Sbjct: 210 LFVIAWEAMTVSSYFLVVYQHEHASHRR----AAFLYLLMGEVGAIAIILAFGIL----- 260 Query: 198 NATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSV 257 A +F ++ + ++ L F +K +VPLH WLP+AH AP S Sbjct: 261 -AAASHSFAFDAWRDAHVTPAWGTAAFLLALAGFGMKAGLVPLHAWLPEAHPAAPAHVSG 319 Query: 258 DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAY 317 ++G++LK A YGLLRF+ L + + I + LG G A Q+D+KRL+AY Sbjct: 320 LMSGVMLKIAVYGLLRFAFDLLGDVQWYWGAIVLGLGTGSAALGILYAVVQSDLKRLLAY 379 Query: 318 TSVSHMGFVLIAIYT-----------GSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERI 366 +S+ +MG V + + + A+ ++ H L LF+ G + + Sbjct: 380 SSIENMGIVFMGLGLCMVFIGKGHVQLGLIGLVAALYHVLNHSLFKNLLFLAAGSVVHQT 439 Query: 367 HTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI----- 421 H D+ MGGL +M L L +VA G+P FV E++ + Q VI Sbjct: 440 HRHDLEHMGGLIKRMPVTAGLFLAGSVAIAGLPPLNGFVSEWLTFQAALQAASVIDNGIL 499 Query: 422 -------TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVL 474 I F A+ + + A+ G+ + + ++ L+ +L L Sbjct: 500 RSMVSVAAAILAFTAAVAAACFVKLYGVAFLGQPRERRSAHAHEVSHSGMLWAPAMLAGL 559 Query: 475 LVLLGFYPQPILDTSHSAIGNIQQWFVNSVT 505 +LLG P +LD + + S + Sbjct: 560 CLLLGVLPTWVLDAMRPITRQLLGETLTSAS 590 >UniRef50_C7FEW5 NADH-ubiquinone oxidoreductase chain 4 n=2 Tax=Saccharomycetales RepID=C7FEW5_BRECS Length = 482 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 126/421 (29%), Positives = 227/421 (53%), Gaps = 14/421 (3%) Query: 77 ISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDM 136 ++I DG+ L+ ++LT LG+++++ +W+ I + + + LM ++ + F+ +D+ Sbjct: 69 LNIDFGYDGIGLVFIILTIYLGIISIISNWENIVSKKETYMILLMSLIILMGLNFICLDL 128 Query: 137 FLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVH 196 F+ +E L+P+Y +I ++G G + AA IYT S L ML+AI+ + ++ Sbjct: 129 ISFYILFESTLIPLYLMIGIYG-----GSNKNKAAYYVLIYTLCSSLFMLLAIVMIYVLY 183 Query: 197 YNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGS 256 N ++ + + +S ++ +L++G I VK P+VP+H WLP HS++P GS Sbjct: 184 NNV------DFVTINSKIISMELQSVLLIGLMIGLGVKTPLVPIHTWLPTVHSESPLGGS 237 Query: 257 VDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIA 316 + LAGI+LK A YG++R L S +API +G+I I Y + + +QTD+K +IA Sbjct: 238 ILLAGIILKLAIYGIIRILLSNISEISLLYAPILYVIGIITIIYSSLVTLSQTDLKVIIA 297 Query: 317 YTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC-GQLYERIHTRDMRMMG 375 Y+S+SH+G ++ I++ + L G++I +AHG + LFIL G LY+R H R + Sbjct: 298 YSSISHLGVCILGIFSNNLLGIVGSLILCLAHGFVSPALFILMGGVLYDRYHNRVLFYYQ 357 Query: 376 GLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVY 435 GL M +FF+ G P + NFVGEF+ + G+ P+I + ++ ++ Y Sbjct: 358 GLTQFMPIFAVYLVFFSFCNTGTPLSYNFVGEFLCISGAIIKHPIIGAFTAASVILSACY 417 Query: 436 SLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGN 495 + ++ G + + RE F++L L + ++LG P I + + + Sbjct: 418 QFKLTNKLTSGAFSKYL--HVTYDLLYREHFILLFLAIPTLILGIAPNVISNILYLSSNA 475 Query: 496 I 496 + Sbjct: 476 L 476 >UniRef50_Q9RGZ5 Na(+)/H(+) antiporter subunit A n=9 Tax=Firmicutes RepID=MRPA_BACPF Length = 805 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 123/513 (23%), Positives = 219/513 (42%), Gaps = 47/513 (9%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L W + PF+ L ++ ++ L L L L ++ S+T + G+ Sbjct: 3 VLHWATISPFLLAILIPFLYKYARRIHTGW----FVLVLPLVLFIYFIQYLSITSTGGV- 57 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQ---GFFHL 118 E +PW+P GI+ + +DGLSLL +L +G L +L S + K F++ Sbjct: 58 ---VEHTIPWVPSLGINFTVFVDGLSLLFALLITGIGTLVILYSIFYLSKKTESLNNFYV 114 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 L+ +G ++GV L+ ++ + + FWE+ + LI+ W H+ A K + T Sbjct: 115 YLLMFMGAMLGVVLSDNLIVLYVFWELTSLASSLLISYWFHREKST----YGAQKSMLIT 170 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 G ML L + + +L+ SS + M+ + K Sbjct: 171 VFGGFAMLGGFSLLYVMTGTFSIRGIIENVDLVT---SSELFLPAMILVLLGAFTKSAQF 227 Query: 239 PLHGWLPDAHSQAPTAGSVDL-AGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 P H WLPDA +APT S L + ++K Y + R + SAE+ + GV+ Sbjct: 228 PFHIWLPDAM-EAPTPVSAYLHSATMVKAGIYLVARLTPVF--AGSAEWFWLLTGFGVVT 284 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGS--------------QLAYQGAVI 343 + +G+ A Q D+K ++A+++VS +G ++ + GS A A+ Sbjct: 285 LLWGSTSAVRQKDLKGILAFSTVSQLGLIMTLLGLGSAAIYFGESVDPAFYSFAIMAAIF 344 Query: 344 QMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGN 403 +I H LF+ G + TRD+R +GGL + M +SL + G+P Sbjct: 345 HLINHATFKGSLFMTAGIIDHETGTRDIRKLGGLMAIMPVTFTVSLIGLASMAGLPPFNG 404 Query: 404 FVGEFMILFGSFQVV-----------PVITVISTFGLVFASVYSLAMLHRAYFGKAKSQI 452 F+ + M + +I V++ VF +Y L M + + GK K + Sbjct: 405 FLSKEMFFTALLRATEMNAFNMETFGIIIVVLAWIASVFTFLYCLIMFFKTFTGKFKPEN 464 Query: 453 ASQELPGMSLRELFMILLLVVLLVLLGFYPQPI 485 ++ + L ++L L+++ GF+P + Sbjct: 465 YDVKVHEAPIGMLISPVILGSLVIVFGFFPNIL 497 >UniRef50_C7NIQ7 NADH:ubiquinone oxidoreductase subunit 5 (Chain L)/multisubunit Na+/H+ antiporter, MnhA subunit n=2 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NIQ7_KYTSD Length = 1003 Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats. Identities = 129/520 (24%), Positives = 221/520 (42%), Gaps = 35/520 (6%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLT------ 55 +L ++ G K +AL ++ + L + S Sbjct: 1 MLALILAHLVAALCAPMLVRALGSKAFLPLALPSLASVVYLVAKAPAVHAGSTDHPHHEV 60 Query: 56 -QSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQ- 113 Q AG W+ + G+++ +D LS ++ ++ +G L ++ E + Sbjct: 61 GQGAGGLPPAVTESWTWVHQLGMNLDFRLDSLSWVLAMVVVFIGTLVLIYCVGYFEDDEP 120 Query: 114 --GFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAA 171 G F +L G ++G+ +M + + FWE+ V + LI GH+ + +R +AA Sbjct: 121 GLGLFAGSLTAFAGAMLGLVTTDNMLVLYVFWEITSVLSFLLI---GHRITSRHSR-SAA 176 Query: 172 TKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAF 231 + I T + GL ML+ I+ L ATG ++ + + + P + + ++ + Sbjct: 177 MEALIITASGGLAMLVGIVGLG----QATGSYSIS-ALMAHPPEAGPLVTASVVLLLVGA 231 Query: 232 AVKMPVVPLHGWLPDAHSQAPTAGSVDL-AGILLKTAAYGLLRFSLPLFPNASAEFAPIA 290 K +VP H WLP A + APT S L A ++K Y + RF+ P F + + Sbjct: 232 ITKSAMVPFHFWLPGAMA-APTPVSAYLHAAAMVKAGIYLIARFA-PAFADLDV-WKWTV 288 Query: 291 MWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGL 350 + LG + GAW + Q DIK ++AY +VS +GF+++ + G+Q A + ++AH L Sbjct: 289 LLLGGPTMLLGAWRSLRQVDIKLVLAYGTVSQLGFLVLVVGHGTQDAALAGLTLLVAHAL 348 Query: 351 SAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMI 410 LF++ G + TRD+R + GL M L A + A + G+P FV + Sbjct: 349 FKGSLFLVVGAIDHCTGTRDLRRLSGLARSMPVLFATACVSAASMAGVPPLLGFVSKEGA 408 Query: 411 LF-------GSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLR 463 G F V V V G + YS L A+ + + PG L+ Sbjct: 409 YTVFNPVEHGWFTVEGVTFVFILVGSMMTFAYSARFLWGAFRTQRTKPLTEVHDPGFFLQ 468 Query: 464 ELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNS 503 F LL V ++LG + +L +GN W+ S Sbjct: 469 --FSPALLAVCTIVLGLTSKTVL---EPWLGNYSGWWAAS 503 >UniRef50_Q49W91 Na(+)/H(+) antiporter subunit A1 n=19 Tax=Bacillales RepID=MNHA1_STAS1 Length = 805 Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats. Identities = 120/528 (22%), Positives = 224/528 (42%), Gaps = 52/528 (9%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL +L+P I + RF ++ L + + L + S + Sbjct: 3 LLHIAVLLPLIFALIIPFVYRFYKRIHLGW--------FVLPIPVVLFIYFLSYISTTMS 54 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQ--GFFHLN 119 W+P FG++ +L +DGL LL +L +G L VL S + + + G F+ Sbjct: 55 GNTIMEKANWMPHFGMNFNLYVDGLGLLFSLLITGIGCLIVLYSISYLSRQEQLGHFYCY 114 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 L+ +G ++G+ L+ ++ + + FWE+ + LI+ W D + I A K + T Sbjct: 115 LLLFMGAMLGLVLSDNLIILYLFWELTSFSSFLLISFW----RDKQASIYGAQKSMLVTV 170 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTP---MSSGVEYLLMLGFFIAFAVKMP 236 + L + + T + +EL+N +S M+ I K Sbjct: 171 F------GGLSLLGGIILLSIAGGTTSIQELINNASEIQTSPFFIFSMILVLIGAMTKSA 224 Query: 237 VVPLHGWLPDAHSQAPTAGSVDL-AGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGV 295 P + WLPDA +APT S L + ++K Y + R + P+F S + +G+ Sbjct: 225 QFPFYVWLPDAM-EAPTPVSAYLHSATMVKAGLYLVARMT-PIFA-VSQGWIWTVTAVGL 281 Query: 296 IGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGS-------------QLAYQGAV 342 I +F+ + A Q D+K ++A+++VS +G ++ + G+ A+ A+ Sbjct: 282 ITLFWASLNATKQQDLKGILAFSTVSQLGMIMAMLGVGAVSFHFEGAESQIYIAAFTAAI 341 Query: 343 IQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTG 402 +I H LF++ G + TRD++ +GGL + M ++L +++ G+P Sbjct: 342 FHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTIMPISFTITLITSLSMAGIPPFN 401 Query: 403 NFVGEFMILFGSFQVVPV-----------ITVISTFGLVFASVYSLAMLHRAYFGKAKSQ 451 F+ + L +V V I + + G VF VYS+ + + + G K Sbjct: 402 GFLSKEKFLESMIEVTNVNLFSLDTLGILIPITAIIGSVFTFVYSIRFIGQIFLGSYKED 461 Query: 452 IASQELPGMSLRELFMILLLVVLLVLLGFYPQPIL-DTSHSAIGNIQQ 498 ++ +S L +L +L+++ G +P + A+ I Q Sbjct: 462 KLPKKAHEVSPLMLISPSILAILVIVFGLFPAILSGSIIEPAVNAIGQ 509 >UniRef50_Q9G8P5 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Naegleria gruberi RepID=Q9G8P5_NAEGR Length = 474 Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats. Identities = 153/460 (33%), Positives = 244/460 (53%), Gaps = 16/460 (3%) Query: 40 LALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGV 99 + L + +++ S + +I F S IDG+S+ + L+ L Sbjct: 17 FYFDISLIIFFIFNIVWVLFDSFEPSFQFIQYINLFEYSFLFGIDGISIFFIYLSTFLIP 76 Query: 100 LAVLCSWKEIEKY----QGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIA 155 L +L S+ +++ + L L +I VF A+D+ +F+ +E++L+P + LI Sbjct: 77 LCLLFSFYNMKQKGVSEVKMYQSFLFLTLFLLIFVFSALDILVFYIMFEIILIPFFVLIG 136 Query: 156 LWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPM 215 + ++ K RI A+ FF YT +MLI+I +L + T N E LLN Sbjct: 137 VSSYR----KRRIHASYLFFFYTLVGSFLMLISIFSLY------SFTGTSNIEVLLNNQY 186 Query: 216 SSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFS 275 S E ++ L FFI+FA+K+P+ P H WLP+AH +APT GSV LAG+LLK +YG LRF Sbjct: 187 SFYRENIVWLTFFISFAIKIPMFPAHIWLPEAHVEAPTEGSVLLAGVLLKLGSYGFLRFL 246 Query: 276 LPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQ 335 +PLFPN++ ++P+ + + +GIFY +++ Q DIKR+IAY+SVSHM ++ ++T Sbjct: 247 MPLFPNSTYYYSPLVILIACLGIFYTSFVTLKQIDIKRIIAYSSVSHMNVCILGLFTFHS 306 Query: 336 LAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVAT 395 L G++ MIAHGL + GLF L G LY R HT+ ++ GL M F ++ Sbjct: 307 LGIAGSIHLMIAHGLVSGGLFFLVGMLYNRHHTKLLKYYSGLVYTMPLFSFFFFIFIISN 366 Query: 396 LGMPGTGNFVGEFMILFGSFQVVPVITVISTF-GLVFASVYSLAMLHRAYFGKAKSQIAS 454 + P T NF+GEF+I+ G F + T G+ +VYSL + ++ F K Q Sbjct: 367 ISFPLTSNFIGEFLIIVGLFLSFNYYALFFTLVGVFICTVYSLWLYNKLVFMIPKYQYIK 426 Query: 455 QELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIG 494 +S E ++ +++ ++ LG YP I ++I Sbjct: 427 Y-YNDLSFLECSLLFIILFFVLWLGIYPYSIFSILDTSIN 465 >UniRef50_B2A3T0 NADH dehydrogenase (Quinone) n=2 Tax=Clostridia RepID=B2A3T0_NATTJ Length = 500 Score = 284 bits (728), Expect = 5e-75, Method: Composition-based stats. Identities = 124/491 (25%), Positives = 225/491 (45%), Gaps = 31/491 (6%) Query: 5 WLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQ 64 ++L P I + + E+ + ++++T +T + ++ + Sbjct: 13 LIVLFPLIMTGVIFLVEQKSIFGRNLLSVVTSAITFLMVAAMYPVVIKGEVIYYQLANL- 71 Query: 65 SEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEK--YQGFFHLNLMW 122 IP FGIS +D L + +L + +L + S + ++K Y G ++ L Sbjct: 72 -------IPPFGIS--FMVDTLGFGLSLLASFIWMLVTIYSLEYMKKENYTGRYYPALSL 122 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 L G +G+FLA D+F F F+E+M + Y LI ++ K + A K+ I T G Sbjct: 123 TLSGSMGLFLAGDLFTMFIFFEIMSLVSYLLII-----HNETKEALRAGYKYLIVTIIGG 177 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 L + I+ + T E+ + + + L F I F +K +VPLH Sbjct: 178 LFLFFGIIITFELSQTIT------LSEMGIISTPTSLAFAGFLSFVIGFGMKAGMVPLHI 231 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLF---PNASAEFAPIAMWLGVIGIF 299 WLP+AH AP+ S L+GI++KT AYGL+R +F A + I + VI IF Sbjct: 232 WLPEAHPVAPSPASALLSGIMIKTGAYGLIRIMFHVFDYQMILEANWHLILAVVAVITIF 291 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 G+ +A Q D+KR +AY+S+ MG++L+ + ++ A G + + +H + LF+ Sbjct: 292 LGSAVAITQEDLKRRLAYSSIGQMGYILLGLAILTETAMTGDIFHIFSHAFMKSTLFLAA 351 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV-V 418 G + + + + + G+ M A+A +G+P F+ ++ + G+ + Sbjct: 352 GAMIMKTGKKKIADLKGVGRAMPLTMLSFTIAALAMIGIPPLNGFISKWSLSLGALEAGQ 411 Query: 419 PVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGM----SLRELFMILLLVVL 474 P VI + SVY L +++ AYFGK++ E G+ ++ + + +L Sbjct: 412 PYYVVILLISSLMNSVYYLPIINTAYFGKSEETDDDVESKGVISEAPMKMVMPVAILGFS 471 Query: 475 LVLLGFYPQPI 485 ++L +P I Sbjct: 472 CLILSLFPTNI 482 >UniRef50_Q47IK6 Proton-translocating NADH-quinone oxidoreductase, chain M n=2 Tax=Proteobacteria RepID=Q47IK6_DECAR Length = 485 Score = 284 bits (727), Expect = 6e-75, Method: Composition-based stats. Identities = 141/491 (28%), Positives = 240/491 (48%), Gaps = 20/491 (4%) Query: 12 IGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPW 71 G L W + + L++ + L L ++Q + W Sbjct: 15 AGAGLIWLLPSRATR---------PVVALSMIITLALGVAALAAYEPSGARFQLVERVSW 65 Query: 72 IPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVF 131 I + L IDG+++L + T LL + +++ SW + + L+ + +G+F Sbjct: 66 IASLNVHYLLGIDGIAVLFLPATALLFLGSLVASWNAVHDAPRLHYSLLLLLQTANLGIF 125 Query: 132 LAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILA 191 A+D LFF FWE+ LVP+YFL+ WG R AAT++F+ A G+ +L+A + Sbjct: 126 CALDTALFFVFWELTLVPLYFLLGRWGVTTG----RAAAATRYFLIMLAGGIPLLLAFVI 181 Query: 192 LVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQA 251 L + V TF+ LL P+ + + L I F VK+P+VPLH WLP A Sbjct: 182 LAV----SQSVPTFDLMALLAAPLPRSTQTAVFLLCLIGFGVKVPLVPLHTWLPQFSLAA 237 Query: 252 PTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDI 311 P + + L G LK A+GL+RF++PL P+A+ + + LG + I YGA AQ+++ Sbjct: 238 PGSLTALLVG--LKLGAFGLIRFAVPLAPDAALDMHWLLAGLGTVAILYGAVGMLAQSNL 295 Query: 312 KRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDM 371 + +AY S+ H+G ++ + + + QGAV +++ ++ G FIL L +R + D+ Sbjct: 296 RVGLAYASICHVGLAVLGLASYTAQGAQGAVSLLLSFSVATGGAFILLEFLRQRTGSTDI 355 Query: 372 RMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVF 431 +GG M L L +A +GMPGT +F GEF+++ + + + FGL Sbjct: 356 HALGGAAKTMPLLATGFLICGLAGVGMPGTSSFPGEFLLIIAALHSHTGAGMAALFGLSI 415 Query: 432 ASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHS 491 A+ LA+ +A+FG + + +Q + RE +++ L+V++ +G YP P ++ Sbjct: 416 AAGGFLALYRKAFFGPVERESVAQ-ATDLRPREWAVLVALIVMIAGIGIYPGPWIEIVRP 474 Query: 492 AIGNIQQWFVN 502 A V Sbjct: 475 AAEVWAAGLVR 485 >UniRef50_Q9TAK8 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Cafeteria roenbergensis RepID=Q9TAK8_CAFRO Length = 453 Score = 284 bits (727), Expect = 7e-75, Method: Composition-based stats. Identities = 149/456 (32%), Positives = 241/456 (52%), Gaps = 12/456 (2%) Query: 36 MGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTG 95 MG +++ +WL + + + + D+ P + + +D LS+ V+L Sbjct: 1 MGTSISFYYCIWLLLKFFESSDIWGLPIEFQIDLILHPSLNYVLPIGVDSLSIWFVILNH 60 Query: 96 LLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIA 155 L+ L++L ++ K GF + L+ + G+ G F+ D+ FF F+E+ L+P+Y LI Sbjct: 61 LIIYLSLLYTFSTQNKQYGFLY-CLLLLQWGIGGAFMVFDLLGFFIFFELTLIPIYLLIL 119 Query: 156 LWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPM 215 ++G + + +I A+ +YT + M I Y T N+ L+ Sbjct: 120 IYGSR----ERKIRASYLISLYTLFGSIFMFFNIF------YCFAKFGTTNFFVLMTLDF 169 Query: 216 SSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFS 275 + L + FFIAFA K+P++P H WLP+AH +APT GSV LA +LLK YG+LRF Sbjct: 170 APEDAKFLWITFFIAFAAKIPMIPFHIWLPEAHVEAPTIGSVILAALLLKLGTYGILRFL 229 Query: 276 LPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQ 335 L LFP A+ F+P+ +I I + + A Q D+K++IAY+S+ HM VL+ + S Sbjct: 230 LHLFPEATLYFSPLINVFALISIVFTSMTAIRQIDLKKIIAYSSIGHMNVVLLGMLVPSV 289 Query: 336 LAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVAT 395 + +G + QM++HG+ A LF + G Y+R R + GG L L F++A Sbjct: 290 ESLEGTIFQMLSHGIIAGALFFIVGAFYQRYKVRSLEYFGGFMITAPLLATFFLIFSMAN 349 Query: 396 LGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQ 455 + PGT +F+GEFMI FG F+ +I++ +V + Y+L L+R FG KSQ Sbjct: 350 ISFPGTSSFIGEFMICFGLFEYNSFAVIIASINMVTGAAYTLWALNRVNFGNLKSQYI-L 408 Query: 456 ELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHS 491 ++ E ++ LLV+L++L+G +P IL HS Sbjct: 409 SYGDVNRLEFYIFCLLVILMILMGIFPNFILGILHS 444 >UniRef50_C0WGQ4 CPA3 family monovalent cation:proton (H+) antiporter-3 subunit A n=2 Tax=Corynebacterium RepID=C0WGQ4_9CORY Length = 1002 Score = 283 bits (726), Expect = 7e-75, Method: Composition-based stats. Identities = 109/502 (21%), Positives = 204/502 (40%), Gaps = 30/502 (5%) Query: 11 FIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMP 70 +G + + + GL + ++ + + + Sbjct: 4 LLGALIVATV--VAPLLIMNVGRPAFGLLAIVPGVGFVWTLAHFARGTFRDGGTLNYTIE 61 Query: 71 WIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIE---KYQGFFHLNLMWILGGV 127 W+P +++ L +D L L ++ +G L +L W + + F ++ + Sbjct: 62 WMPAAHLAVDLRMDALGGLFSLIILGMGALVLLYCWGYFDSTRRRLAMFAGQMVGFATAM 121 Query: 128 IGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLI 187 G+ + + L + FWE+ + Y L++ + +AS + A + T GL ML+ Sbjct: 122 FGLVTSDSLLLMYVFWEITSLLSYLLVSYYAERASSRRAAQQA----LMVTVLGGLSMLM 177 Query: 188 AILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDA 247 I L TG WTF+ + + + ++ + K +VP H WLP A Sbjct: 178 GICLLG----RQTGAWTFSEIHAYDHFPQTPYVTVAIVLILVGALTKSAIVPAHFWLPGA 233 Query: 248 HSQAPTAGSVDL-AGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAF 306 + APT S L + ++K Y + R + ++ A+ + + + LGV + G WMA Sbjct: 234 MA-APTPVSAYLHSAAMVKAGIYLVARLAPDMYEVAT--WHLVVISLGVFTMLLGGWMAL 290 Query: 307 AQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERI 366 Q D+K ++AY +VS +GF+ + GS+ A Q + AH L A LF++ G + Sbjct: 291 KQKDLKLILAYGTVSQLGFITSIVAVGSREAMQAGLALTFAHSLFKAALFMVVGAIDHCS 350 Query: 367 HTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVIT---- 422 TRD+ + GL + +L +L+L A++ G+P FV + +L + +I Sbjct: 351 GTRDITKLSGLGRRQPFLYSLALISALSMAGVPPLFGFVSKEAVLESTMHEGLLIGMPRN 410 Query: 423 ---VISTFGLVFASVYSLAMLHRAY------FGKAKSQIASQELPGMSLRELFMILLLVV 473 V G + Y+L L A+ K A + +++ +L Sbjct: 411 MILVAYVAGSILTMAYALRFLWGAFASKNLPHDKDGVSAAVATMHKVNVGLWLAPAVLTA 470 Query: 474 LLVLLGFYPQPILDTSHSAIGN 495 L + LG PQ + + + Sbjct: 471 LTIALGLAPQALSAAIDQHLDS 492 >UniRef50_A9A3Z6 Proton-translocating NADH-quinone oxidoreductase, chain M n=4 Tax=Thaumarchaeota RepID=A9A3Z6_NITMS Length = 517 Score = 283 bits (726), Expect = 8e-75, Method: Composition-based stats. Identities = 126/533 (23%), Positives = 221/533 (41%), Gaps = 70/533 (13%) Query: 7 ILIPFIGGFLCWQTERF-GVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQS 65 + +P + + + R G W + T L + L G Sbjct: 9 VFLPLLLSPIAYILGRKVGPTPAMWFTFAILLYTTILVVNAALSG-------------TV 55 Query: 66 EFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCS-------------------- 105 E PW +FG +DGL+ ++ +L + VL S Sbjct: 56 EEHYPWTEQFG-EFGFLLDGLASPFAIIIYVLSTILVLYSKPYMIHKFHEQFEEEQKINP 114 Query: 106 --------------WKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMY 151 + G + + G++G ++ ++ F+ F+E+ML+P + Sbjct: 115 SSSGQSSVVESSALSNYVNAKSGLYFALYLVFAMGMLGTVMSTNLIEFYIFFEVMLIPGF 174 Query: 152 FLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELL 211 FL+ALWG R F +T A +V+L+ L + + +F++ ++ Sbjct: 175 FLVALWGDGP-----RRKIGLMFLFWTHAGAVVLLLGFLMIGLT------IGSFDFADIK 223 Query: 212 NTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGL 271 + + V + + I VK+ V H WLP H APT S L+ ++ AYG+ Sbjct: 224 ESEIPQDVVMISAIAIAIGLGVKLAVFMFHVWLPYVHGSAPTPISALLSPAMIGIGAYGV 283 Query: 272 LRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIY 331 R + P+ AE + G++ + YG MA Q D+KRL+AY+S+S MG++L I Sbjct: 284 FRLIVEFLPSTFAELSIWFHIWGLVTMLYGGAMALMQDDLKRLLAYSSISQMGYLLFGIG 343 Query: 332 TGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFF 391 + S + GA + I HGL LF++ G + ++ TR + +GGL KM ++ Sbjct: 344 SMSAMGLAGAEMMYITHGLGKGILFMMAGIIIVKVGTRSISKLGGLAGKMPITAVCAVIG 403 Query: 392 AVATLGMPGTGNFVGEFMILFGSFQVV--------PVITVISTFGLVFASVYSLAMLHRA 443 A+ +G+P T F+GE+++ +G+ + V + Y L ML R Sbjct: 404 ALTIMGVPPTSGFMGEWILFYGALETAIEEGSTLRAVTFGLGLVATALTMAYMLWMLKRV 463 Query: 444 YFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNI 496 +FGK + +++ S +++L V+LG YP L T + + Sbjct: 464 FFGKTPEHL--EKVKEGSWYMTAPMMVLAGFTVVLGIYPDIFLKTILPYMNGV 514 >UniRef50_C5A2R1 Formate hydrogenlyase II subunit D (Mhy2D) n=1 Tax=Thermococcus gammatolerans EJ3 RepID=C5A2R1_THEGJ Length = 694 Score = 283 bits (726), Expect = 9e-75, Method: Composition-based stats. Identities = 126/508 (24%), Positives = 215/508 (42%), Gaps = 41/508 (8%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L L +I ++ L R + + + GL +LSL + + Sbjct: 6 LFTLTVILYLISILAVLPLRKNYRASITVGHVFTGLA-SLSLLAFTVSVLPEALKGKAIE 64 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF-----FH 117 + + + IP +DGLSL++ ++ G LG+ + S K +E Y+ F + Sbjct: 65 FTYDLGVAKIP-------FHVDGLSLILCLVLGSLGLATSIYSPKYMEFYERFGRGWLYV 117 Query: 118 LNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIY 177 + + ++ + + F FFWE+M Y L+ + K A K+F+ Sbjct: 118 VLYSTFVLSMVLIVTTSNFLWFVFFWEVMTFTSYLLMVWENDEEYVRK----AGWKYFVT 173 Query: 178 TQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPV 237 + + L I+AL ++ A + N++ L + + L F + F K V Sbjct: 174 MHVASTLPL--IVALALLYAKAGSIEGLNFDNLSKLHLGP----IYYLLFLVGFGSKAGV 227 Query: 238 VPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 VPLH WLPDAH AP+ S L+G ++K A YGL+R + + + F I LG + Sbjct: 228 VPLHFWLPDAHPAAPSNVSALLSGAMIKVAVYGLIRTTCFIL-GLNETFGYIVAILGTVT 286 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGA-------------VIQ 344 + G A QTD KRL+AY SV MG++ + + G L +G + Sbjct: 287 LTVGTLYALKQTDAKRLLAYHSVGQMGYIWLGVGAGIALMAKGGSYAAFGAIAMAAGLYH 346 Query: 345 MIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNF 404 ++ H + LF+ G + R HTR++ ++GGL M + A++ G P F Sbjct: 347 LVNHAIFKGLLFLSAGSVLYRTHTRELNVLGGLAKLMPLTALFTFIAAMSIAGEPPFNGF 406 Query: 405 VGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAY---FGKAKSQIASQELPGMS 461 + ++MI G+F + V +F S +LA + Y FG +++ ++ + Sbjct: 407 MSKWMIYQGTFLSGDGLLVFCGVMALFISAATLASFVKFYTTAFGGVPTKV-TENAEEVP 465 Query: 462 LRELFMILLLVVLLVLLGFYPQPILDTS 489 L L L +L G P I+ Sbjct: 466 SSMLVGKGFLAALCLLFGLIPSSIIPLL 493 >UniRef50_Q3T4B9 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Smittium culisetae RepID=Q3T4B9_SMICU Length = 484 Score = 281 bits (719), Expect = 5e-74, Method: Composition-based stats. Identities = 145/482 (30%), Positives = 257/482 (53%), Gaps = 31/482 (6%) Query: 24 GVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAI 83 + + + +AL + + L + L +W+ Y+ + +I L I Sbjct: 22 NIVIIKKLALFSSIIELFIVLLIWILFDYNNPEYINTLMIS-------------NIRLGI 68 Query: 84 DGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFW 143 D +SL+ ++LT L+ +A+L + I+K F + ++ + +F ++D+ LF+ + Sbjct: 69 DSISLIFIILTVLIMPIAILAGFN-IKKKIKTFMILVLLTELIFMLIFTSLDILLFYITF 127 Query: 144 EMMLVPMYFLIALWGH--------KASDGKTRITAATKFFIYTQASGLVMLIAILALVFV 195 E L+PM+FLI L+G K + KTRI A+ KFF+ T A L+ML++I+ + Sbjct: 128 ESSLIPMFFLIGLYGSDSQGMFKGKINKEKTRIYASYKFFLMTFAGSLLMLLSIIKIYTY 187 Query: 196 HYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAG 255 + T +Y + + + ++ +L LGFFI+FA+K P++P+H WLP AH++AP G Sbjct: 188 Y------GTTDYLLISTFNIDNNLQIILWLGFFISFAIKTPLLPVHQWLPLAHTEAPLTG 241 Query: 256 SVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLI 315 S+ LA ++LK A YG +++SL LFP AS F P+ M L +I + Y ++ Q D+K++I Sbjct: 242 SIILAALMLKLATYGFIKYSLILFPYASTYFLPLIMTLCIISLIYSSFSTLRQIDMKKII 301 Query: 316 AYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMG 375 AY+S+ HM +++A+++ + GA+ AHGL++ LFI G LY HTR + Sbjct: 302 AYSSIGHMAIIIMALFSNNYQGITGALFLSFAHGLTSPALFICVGILYNIFHTRIILYFK 361 Query: 376 GLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVV-PVITVISTFGLVFASV 434 GL M L +L+ F +A + P T NF+GEF+ F P +I T ++ V Sbjct: 362 GLSIYMPLLSSLTFIFILANMSTPLTSNFIGEFISFISIFNYHFPFTAIIFTISIILVPV 421 Query: 435 YSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIG 494 YS+ + +FG + S + +++ + +++ L+ ++ G +P +L+ + Sbjct: 422 YSIYFYIKNFFGSYSIYLKSYQ--DINILDFNLLITLLGFILFTGIFPNSLLNILELPVS 479 Query: 495 NI 496 I Sbjct: 480 MI 481 >UniRef50_Q12ZH7 Na+/H+ antiporter subunit n=2 Tax=Methanosarcinaceae RepID=Q12ZH7_METBU Length = 788 Score = 280 bits (718), Expect = 6e-74, Method: Composition-based stats. Identities = 114/510 (22%), Positives = 209/510 (40%), Gaps = 32/510 (6%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 + I +PFI L E+ + W A + L + + I Sbjct: 7 ITVAIFLPFIFAGLVPVMEKLLKQRVGWF---------AAATALASFALIGMAATEVIEG 57 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQ--GFFHLNL 120 + + WIP G++ + DGL+ ++ + +GVL + S + + + ++ L Sbjct: 58 QIIQGSISWIPSAGVNFTIYADGLATMIGFIASGIGVLIMSYSNGYMSRTEDLTRYYQYL 117 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + +G +IG+ + + F FWE+ + + LI W HK I ATK + T + Sbjct: 118 LLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHKPES----IYGATKSLLLTAS 173 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 GL ML L L + + N +++N + + ++ I A K P Sbjct: 174 GGLAMLAGFLLLGNITGSFELAAILNDPQVINAIKEHELFLITLILILIGAAAKSAQGPF 233 Query: 241 HGWLPDAHSQAPTAGSVDL-AGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 + WLP+A +APT S L + ++K Y + R P+F A F + G+I + Sbjct: 234 YIWLPNAM-EAPTPVSAFLHSATMVKAGIYLVARIH-PIFSGTEAWFI-LVSGTGIITML 290 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQ----LAYQGAVIQMIAHGLSAAGL 355 ++AF QTDIK ++AY+++S + +++ + + A ++ H A L Sbjct: 291 VAGFLAFRQTDIKGILAYSTISQLAYMMTMYGYTTHHEPGIGVAAATFHLLNHAAFKACL 350 Query: 356 FILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSF 415 F++ G + TRD+R +GGL +M ++ +A G+P F+ + M S Sbjct: 351 FLVAGIVAHEAATRDIRKLGGLRREMPITFIIACIAGLAMAGIPPLNGFLSKEMFYESSI 410 Query: 416 QVVP--------VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFM 467 ++ +I + G VF YS+ ++ + G+ + + L Sbjct: 411 EMGASIGGIFTFLIPAFAVLGGVFTFAYSIKLIDGIFLGERDKNAIPHHIHEPPMTMLIP 470 Query: 468 ILLLVVLLVLLGFYPQPILD-TSHSAIGNI 496 L L++L G P A+ I Sbjct: 471 PAFLAFLVILFGVIPSLPTHYIIEPAVSGI 500 >UniRef50_B6YTY8 Membrane bound hydrogenase, MbhH subunit n=9 Tax=Thermococcaceae RepID=B6YTY8_THEON Length = 532 Score = 280 bits (718), Expect = 7e-74, Method: Composition-based stats. Identities = 119/525 (22%), Positives = 223/525 (42%), Gaps = 39/525 (7%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +LP+LI+IP G F G K A++ LT +S ++ + Sbjct: 6 ILPYLIIIPLFGAFAMPIVNLAGKKAREAWAVLISALTFIVSSVIFYHIWNTGEIIVYTL 65 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF--FHLN 119 ++ F F I I +D +MV + + ++AV+ S ++ G ++ Sbjct: 66 GAETPFGQG--VDFPIRIVWEVDLFGAIMVFIVAFVSLMAVIYSIGYMKHDTGLDKYYTL 123 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 ++ + G++G+ + D+F F+ F E+M + Y L+A +D I A K+ Sbjct: 124 ILILELGMLGIAITGDLFNFYVFLEIMSIASYALVAF----RNDTWEGIEAGIKYMFVGS 179 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 + +L+ I L Y G T Y + + + + F K P Sbjct: 180 IASAFVLLGIALL----YGQYGTLTMGYLAVKIVQNPTVTAKVALALFIAGLLFKSGASP 235 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAA-YGLLRFSLPLFPNASAEF------------ 286 +H WL DAH AP++ S L+G+++K Y + R ++ + Sbjct: 236 VHMWLADAHPAAPSSISAMLSGLVIKIGGIYAIARILFSIYTPMAHSIVLEAYLQPHINM 295 Query: 287 ---APIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTG--------SQ 335 I + + + G MA QTD+KRL+AY+SV +G++L+ + + Sbjct: 296 SAIGWIIIIFACLTLIIGNAMAVIQTDMKRLLAYSSVGQIGYILLGLGISIAAYGTQTGE 355 Query: 336 LAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVAT 395 +A GA+ + H L A LF++ G + ++ TR++ + GL M L A A Sbjct: 356 IALAGAIYHTVNHALMKALLFLVAGVVIHQLGTRNLNELSGLAKTMPKTTFAFLIGAAAI 415 Query: 396 LGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQ 455 +GMP F +++I S P++ I+ G F + + +L+ +FG+ ++ + Sbjct: 416 VGMPPLNGFASKWLIYESSAIFNPILGAIAIIGTAFCTAAYVRVLY-TFFGRPSEKVMAA 474 Query: 456 ELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWF 500 + P S+ ++L+L + +++G P I D + + F Sbjct: 475 KDPETSMMLPMLLLVLAI--IIMGLLPWQISDKVMIPAARMLEQF 517 >UniRef50_B9DJY9 Putative NADH dehydrogenase I chain L n=1 Tax=Staphylococcus carnosus subsp. carnosus TM300 RepID=B9DJY9_STACT Length = 824 Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats. Identities = 112/489 (22%), Positives = 201/489 (41%), Gaps = 48/489 (9%) Query: 25 VKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAID 84 + WIALI L+ + S + +PW+P + +D Sbjct: 52 ARFSGWIALIAPILSALY---------FVFKISQTADSKITSVSLPWMPIIDLDFAFRLD 102 Query: 85 GLSLLMVVLTGLLGVLAVLCSWKEIEKYQ---GFFHLNLMWILGGVIGVFLAIDMFLFFF 141 GLS++ +L L+G VL + + K F+ L+ + ++GV LA + L + Sbjct: 103 GLSMIFALLITLIGTGVVLYANAYLSKEHDDLPRFYFYLILFMFAMLGVVLADNTILLYV 162 Query: 142 FWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATG 201 FWE+ + + LI+ W + K A K F+ T G+ MLI + + Y+ +G Sbjct: 163 FWELTSIASFLLISYW----YNRKASQNGALKSFLITVFGGMFMLIGFIII----YSISG 214 Query: 202 VWTFN-YEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDL- 259 T + +T SS ++ I K P H WLPDA +APT S L Sbjct: 215 TNTISELVTQTDTLRSSPWFPFAVVCILIGAFTKSAQFPFHIWLPDAM-EAPTPVSAYLH 273 Query: 260 AGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTS 319 + ++K Y L RF+ L + ++ I + +G+I + G+++A Q D+K L+AY++ Sbjct: 274 SATMVKAGLYLLFRFTPIL--SYASWVGYIVITVGIITLAVGSFVAVGQRDLKALLAYST 331 Query: 320 VSHMGFVLIAIYTG-------------SQLAYQGAVIQMIAHGLSAAGLFILCGQLYERI 366 +S +G ++ + G ++ + +I H L + LF+ G + Sbjct: 332 ISQLGMIMSMVGFGMLTYSLHKSFVEFFVISLFAGLFHLINHALFKSVLFMGAGIIDHET 391 Query: 367 HTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ---------- 416 TR++ +GGL + + A+A G+P F+ + M Sbjct: 392 GTRNLADLGGLRKLLPVTATIMTISAMAMAGLPFFNGFLSKEMFFTTLVNGRKLPIDDQI 451 Query: 417 VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLV 476 + ++ +I+ V VYSL M+ +FG + + +++V L Sbjct: 452 FMSIMLIIAIGASVLTFVYSLRMIKDTFFGPLNKEKLPHVPGHEPIGMYIAPVIIVCGLP 511 Query: 477 LLGFYPQPI 485 L P + Sbjct: 512 LFFIIPNIL 520 >UniRef50_A3YZD4 NADH dehydrogenase subunit 4 n=1 Tax=Synechococcus sp. WH 5701 RepID=A3YZD4_9SYNE Length = 493 Score = 278 bits (713), Expect = 3e-73, Method: Composition-based stats. Identities = 151/475 (31%), Positives = 249/475 (52%), Gaps = 27/475 (5%) Query: 28 PRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLS 87 PR +AL+ GL L L +++ +Q L + W+P+ G+ HL DGLS Sbjct: 25 PRRLALVIPGLQLLLIVRMVIQPASDL-------------RLVWLPQLGLDFHLGQDGLS 71 Query: 88 LLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMML 147 L +V LT LL ++AV + E+ + Q F ++ G+ G LA + LF +E++L Sbjct: 72 LPLVGLTALLTLMAVAATSLELPR-QRLFFALVLATNLGLQGALLARNGLLFVIAFELIL 130 Query: 148 VPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNY 207 +P LIA+WGH+ AA ++ IY SG+ +L +LAL ++ N ++ Y Sbjct: 131 IPTTLLIAIWGHE-----RSREAAIRYLIYGAVSGVSLLAGVLALGLLNANG---FSLAY 182 Query: 208 EELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTA 267 +E+ + G + ++ +AF +K+P VPLHGW P A+S++ + ++ LAG + K Sbjct: 183 DEMATAVLPQGSKVWILGLLILAFGLKLPAVPLHGWQPLAYSESSSPVAMLLAGAVSKLG 242 Query: 268 AYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVL 327 AYGLLRF + +AP+ G G YGA A AQTD++RL+AY+S+ HMG +L Sbjct: 243 AYGLLRFGVGFMGETWESWAPLIAVAGTAGAVYGALNAIAQTDMRRLVAYSSLGHMGLLL 302 Query: 328 IAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGL---WSKMKWL 384 +A+ + L+ QGAV Q++AHG+ ++ LF + G + + T ++ + GL + + Sbjct: 303 LAMAAATPLSLQGAVSQVLAHGVISSLLFCVVGLIEAKTGTTEIAELSGLLNPLRGLPFT 362 Query: 385 PALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAY 444 + L +A G+PG FV E ++ GS+ V P+ T+ F +VY++ + +R Sbjct: 363 LGMFLLALMAAAGLPGMVGFVAELVVFQGSWSVFPLPTLGCLFASGLTAVYAVRLFNRVG 422 Query: 445 FGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQW 499 FGK + A P + E L L + +++ G +P L S S + Q Sbjct: 423 FGKLDNAKAFY--PATTWPERLPALALSLFVLVGGLWPPLTLGWSESVTTPLAQH 475 >UniRef50_C0GDB1 NADH dehydrogenase (Quinone) n=2 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDB1_9FIRM Length = 782 Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats. Identities = 118/517 (22%), Positives = 210/517 (40%), Gaps = 53/517 (10%) Query: 2 LLP-WLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 LLP + + +P G L + RF K+ A+IT +T + ++ Sbjct: 19 LLPVFAVAVPLAGSLLVFFAGRFSEKLRDICAVITALITFGIVFSMYPLVQ--------- 69 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIE--KYQGFFHL 118 Q+ + +SIH +D + L + LA L S +E + + +++ Sbjct: 70 ---QAVLQYEFAKFLQVSIHFRVDFFGFVFAALMSCIWFLATLYSIAYMEHGRAKNRYYV 126 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 L+ LG +GV L D+F F F+E+M Y L+ + + Sbjct: 127 FLLSTLGHCLGVVLVGDLFSLFLFFELMTFSSYVLVI-----HEETPDAMAGGAVTLYLG 181 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVE-YLLMLGFFIAFAVKMPV 237 GL +L+AI L F V T L +S + Y ++ F + F +K + Sbjct: 182 VFGGLCLLMAIFLLYF------NVGTMEIIPLYEQIAASAINPYTVVTLFLVGFGIKAGM 235 Query: 238 VPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLF-----------PNASAEF 286 VPLH WLP AH AP S L+G+++K AYG+ R +F S F Sbjct: 236 VPLHIWLPKAHPVAPAPASALLSGLMIKAGAYGIFRVVGMIFTPSEFSEVAVPSIVSVNF 295 Query: 287 APIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGS------QLAYQG 340 +W+G+I +F GA+MA T K+++AY+SVS MG++L+ + T + + + G Sbjct: 296 GYAIIWMGIITMFLGAFMALLSTGAKKILAYSSVSQMGYILLGVGTAAYLGFAGPMGFAG 355 Query: 341 AVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPG 400 A+ +I H AGLF++ G +Y H D+ + G+ K+ ++ L G+PG Sbjct: 356 ALYHIINHAFFKAGLFMMVGSIYMITHNLDITQVRGMAKKVPFIAVTFLIGYAGIGGIPG 415 Query: 401 TGNFVGEFMILFGSFQVVPVITV--------ISTFGLVFASVYSLAMLHRAYFGKAKSQI 452 + + ++ + I Y + + G + Sbjct: 416 FNGYGSKTILHHAIVDAANLHGSVPLHVAEKIFVVTSAMTLCYFAKLFRGLFLGDVPEKY 475 Query: 453 ASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTS 489 + + ++ +++ +G +P +L+ Sbjct: 476 DKKSY-NFTWPVYAVLGTFGAIIIAIGLFPHFLLNRM 511 >UniRef50_B9KDW0 NADH-quinone oxidoreductase, M subunit n=1 Tax=Campylobacter lari RM2100 RepID=B9KDW0_CAMLR Length = 489 Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats. Identities = 135/501 (26%), Positives = 245/501 (48%), Gaps = 33/501 (6%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L L+L PF F+ ++ K + +S + + + L G Sbjct: 1 MLSLLMLFPFFAAFIALFLQKEDSK----------SFAILVSFLILVFNIFLLFNYHGGI 50 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 ++ + ++ H+ +D ++L +++L ++ L+ +C ++ +++ Sbjct: 51 AYEFSLN-----SLIVNFHIGVDAIALYLMLLCSIMIFLSFIC----LDIQDKSVVVSIF 101 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + +IG+F ++D LF+ FWE L+P+ +L+ + A KFFIY Sbjct: 102 LLQFCIIGLFASLDALLFYVFWEFSLIPLIYLMGRY-------SDNYKAGIKFFIYAFCG 154 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPM--SSGVEYLLMLGFFIAFAVKMPVVP 239 ++ML+AI+ + F++Y + G W+F+ + V+ L+ +GFFIAFA+K P+ P Sbjct: 155 SMLMLLAIIYVGFLYYQSFGYWSFDLLAWYKSDFFIPESVQNLIFIGFFIAFAIKSPLFP 214 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 H W P ++++PT SV L + K A +G LRF LPL P+ + + L ++GI Sbjct: 215 FHTWAPKVYAKSPTLVSVML--VSFKMAPFGFLRFILPLTPDTLNHYYSLLAVLCIVGIL 272 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 Y A +AF D+K LIAY+S+SH+G V++ I T + G+V M AHG+ GLF+ Sbjct: 273 YAALIAFKAKDLKELIAYSSISHLGVVILGIVTFTYNGVSGSVFYMFAHGIVTGGLFLAA 332 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP 419 LY+R HT D+ L +++ +P T +FVGEF+IL G V Sbjct: 333 YMLYKRYHTFDLDFYKNLAKTAPLFSFFFAVLLFSSISLPLTISFVGEFLILQGIASVNL 392 Query: 420 VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLG 479 + + ++ ++Y L + +F ++ +I E + E+F++ +L L++ LG Sbjct: 393 WYALFAGGVIILGAIYMLNIYRNMFFATSEEKI---EKLVLKKGEIFVLSILSALVIYLG 449 Query: 480 FYPQPILDTSHSAIGNIQQWF 500 P +LD + +I + Sbjct: 450 IAPSAMLDEIALNVNSILEVM 470 >UniRef50_D0XMF8 NADH dehydrogenase (Quinone) n=3 Tax=Alphaproteobacteria RepID=D0XMF8_9CAUL Length = 992 Score = 277 bits (709), Expect = 9e-73, Method: Composition-based stats. Identities = 112/496 (22%), Positives = 210/496 (42%), Gaps = 38/496 (7%) Query: 12 IGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPW 71 IG R G AL +TLA + L A + + + W Sbjct: 48 IGALAPALAIRRGRNAS---ALAAGAVTLAALVIL------GSFAPAVLAGEVVQARIDW 98 Query: 72 IPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEK--YQGFFHLNLMWILGGVIG 129 IP G++++L +D L L+ + +G+L ++ + + K G F + L+ G + G Sbjct: 99 IPLLGLNLNLFLDALGLMFAGMILGIGLLVIVYARFYLAKADPMGRFFVYLLLFQGAMTG 158 Query: 130 VFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAI 189 + L+ ++ L FWE+ + + LI W H + A A +++ Sbjct: 159 IVLSDNVLLLLIFWELTSLSSFLLIGFWRHLPEGRQGARMA--------LAVTGAGGLSL 210 Query: 190 LALVFVHYNATGVWTF-----NYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWL 244 + + + N G + N E + +P+ L++ G F K P H WL Sbjct: 211 IGGLLILGNIAGSYDLTVILQNREAIQASPLYLPALLLILGGCF----TKSAQFPFHFWL 266 Query: 245 PDAHSQAPTAGSVDL-AGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAW 303 P A + APT S L + ++K + L R L + + E+ + G++ + + A Sbjct: 267 PHAMA-APTPVSAYLHSATMVKAGIFMLARLWPVL--SGTGEWFYLVATTGLVTMVFAAV 323 Query: 304 MAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLY 363 +A + D+K L+AY+++SH+GF+ + G+ +A V ++ H A LF+ G + Sbjct: 324 VALFKDDLKGLLAYSTISHLGFLTMLFGFGTPMAAVVGVFHILNHATFKAALFMNAGIVD 383 Query: 364 ERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV--- 420 TRD++ +GGL + M L++ ++ G+P F+ + M+L + V Sbjct: 384 HEAGTRDIKRLGGLATLMPIAATLAVVAGLSMAGIPPLNGFISKEMMLEEASHTVWWSQP 443 Query: 421 --ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLL 478 + ++T G F+ YS + YFG ++ + + +LV L+V + Sbjct: 444 WLVPALATLGATFSVAYSFRYIVHVYFGTTRTDY-PKTPHDPGIGLWGPPAVLVGLVVAI 502 Query: 479 GFYPQPILDTSHSAIG 494 G +P + A+ Sbjct: 503 GLFPAVVAGPLVEAVS 518 >UniRef50_C5QQQ5 CPA3 family monovalent cation:proton (H+) antiporter-3 subunit A n=2 Tax=Staphylococcus RepID=C5QQQ5_STAEP Length = 816 Score = 276 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 123/527 (23%), Positives = 227/527 (43%), Gaps = 52/527 (9%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L +L+P I + RF ++ L L + + L ++ S+T S Sbjct: 19 LHIAVLLPLIFALIIPILYRFVKRIH----LGWFVLPVPIVLFIYFISLISITMSGNT-- 72 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQ--GFFHLNL 120 + W+P FG++ +L +DGL LL +L +G L VL S + K + G F+ L Sbjct: 73 --VMKTLNWMPHFGMNFNLYVDGLGLLFSLLITGIGSLVVLYSIGYLSKSEQLGNFYCYL 130 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + +G ++GV L+ ++ + + FWE+ + LI+ W + K I A K I T Sbjct: 131 LLFMGAMLGVVLSDNLIILYLFWELTSFSSFLLISFW----REKKASIYGAQKSLILTVL 186 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTP---MSSGVEYLLMLGFFIAFAVKMPV 237 + L + + TF+ + ++ +S L M+ I K Sbjct: 187 ------GGLSLLGGIILLSLAADTFSIQTMIEKASEIQNSPYFILAMILVMIGAFTKSAQ 240 Query: 238 VPLHGWLPDAHSQAPTAGSVDL-AGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVI 296 VP + WLPDA +APT S L + ++K Y + R + P+F S + +G+I Sbjct: 241 VPFYIWLPDAM-EAPTPVSAYLHSATMVKAGLYLVARMT-PIFA-ISEGWVWTITLVGLI 297 Query: 297 GIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQ-------------LAYQGAVI 343 +F+ + A Q D+K ++A+++VS +G ++ + G+ + A+ Sbjct: 298 TLFWASLNATKQQDLKGILAFSTVSQLGMIMSMLGIGAVSYHYQGADSQLYVAGFVAAIF 357 Query: 344 QMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGN 403 +I H LF++ G + TR+++ +GGL + M +++ A++ G+P Sbjct: 358 HLINHATFKGALFMITGGVDHATGTRNVKKLGGLLTIMPISFTMTIITALSMAGVPPFNG 417 Query: 404 FVGEFMILFGSFQVVP-----------VITVISTFGLVFASVYSLAMLHRAYFGKAKSQI 452 F+ + L V + +I+ G +F VYS+ + +FGK K Sbjct: 418 FLSKEKFLEAMIDVTHADLMSLNTLGIIFPIIAIVGSIFTFVYSIKFIMHIFFGKYKPDS 477 Query: 453 ASQELPGMSLRELFMILLLVVLLVLLGFYPQPILD-TSHSAIGNIQQ 498 + S+ L ++L +L+V+ G +P + A + Q Sbjct: 478 LPKSAHESSMLMLLSPIILTILVVVFGLFPSILTQSIIEPATQAVSQ 524 >UniRef50_Q67NV3 Na+/H+ antiporter subunit n=1 Tax=Symbiobacterium thermophilum RepID=Q67NV3_SYMTH Length = 754 Score = 276 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 115/442 (26%), Positives = 206/442 (46%), Gaps = 22/442 (4%) Query: 69 MPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI--EKYQGFFHLNLMWILGG 126 +PW+P+ GI + + +DG L +L +G L VL S + + G F+ L+ +G Sbjct: 38 IPWVPQLGIDLSIHVDGWGRLFALLIAGIGTLVVLYSIPYLGAREDLGKFYAYLLLFMGA 97 Query: 127 VIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVML 186 ++GV A ++ L + FWE+ + + LI W + A K + T GL ML Sbjct: 98 MLGVVYAGNLMLMYVFWELTSISSFLLIGFWNTRDDAQ----YGALKAILITFGGGLCML 153 Query: 187 I--AILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWL 244 AIL V + + + ELL P+ + LL++G F K P H WL Sbjct: 154 GGLAILGTVGGTFELSALLA-KQAELLGHPLVTVALVLLLIGAF----TKSAQFPFHIWL 208 Query: 245 PDAHSQAPTAGSVDL-AGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAW 303 PDA + APT S L + ++K Y + R P+F + + P+ +G++ + G++ Sbjct: 209 PDAMA-APTPVSAYLHSATMVKAGLYLIGRL-WPIF-HTHPLWVPVVAAVGMVTMVVGSF 265 Query: 304 MAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLY 363 +A +TD+K ++A +++S +G ++ G+ A Q A ++ H A LF++ G + Sbjct: 266 LAVQKTDLKAVLALSTISQLGLIMWLFGLGTPEATQAAAFHLLNHSTFKALLFMVVGIID 325 Query: 364 ERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI-- 421 + TR++ ++ GL M L++ A + G+P F+ + M L Sbjct: 326 HQTGTREIPLLSGLRRAMPVSAGLAMVGAASMAGVPLLNGFLSKEMFLTAVHGSSMGAAG 385 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 +++T + ++Y L + H+ +FG+ E S+ L LLL V++V +G Y Sbjct: 386 ALVATGASLLTTLYCLILGHKIWFGEPHETPDVPEEGSPSI--LVPPLLLAVIIVAVGIY 443 Query: 482 PQPILDTS-HSAIGNIQQWFVN 502 P + A+ + Q + Sbjct: 444 PGLVESAIVTPAVAAVLQGPAD 465 >UniRef50_A6TVL5 NADH dehydrogenase (Quinone) n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TVL5_ALKMQ Length = 498 Score = 276 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 100/433 (23%), Positives = 200/433 (46%), Gaps = 19/433 (4%) Query: 71 WIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQG-----FFHLNLMWILG 125 W P GI +D S LM ++ + L ++ S K+IE ++ + +L Sbjct: 67 WNPTIGI--EFVVDEFSALMTLVVLSVATLIIIYSLKDIEHEILKEQFFSYYTLIFLLLF 124 Query: 126 GVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVM 185 +IG+ D+F + F E++ + +I++ K + A+ K+ + + + Sbjct: 125 SMIGMIFTNDLFNLYVFMEILSLTSCGIISI-----KRKKENLMASFKYLMLGAIGSVSI 179 Query: 186 LIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFI-AFAVKMPVVPLHGWL 244 L+ I L V + T YE + S L+ LGF + F +K + PLH WL Sbjct: 180 LMGIALLYMVTGHLN--MTAAYEVITQVWQSYPRNILIALGFILTGFGIKAAIFPLHIWL 237 Query: 245 PDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPN---ASAEFAPIAMWLGVIGIFYG 301 PDAHS APT S L+G+++K + + + + S + V+ + G Sbjct: 238 PDAHSNAPTPSSALLSGLVVKVYVFAIAKILFRVLGQDIVQSIGVTEFITYFAVLSMIMG 297 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 + A QTDIKRL+AY+SV+ +G++ + + ++L + + +I H L + LF+ G Sbjct: 298 SVFAIGQTDIKRLLAYSSVAQIGYIFLGLGLATELGFSAGLFHVITHALMKSALFLSAGA 357 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV-VPV 420 + + RD+R + G+ +M + A+ +G+PG F+ ++ + + PV Sbjct: 358 IIYQTGKRDIRDLDGIGYQMPITMGVFSVAALGMIGIPGLNGFMSKWYLSLAVLEADKPV 417 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 ++ ++Y L ++ A+ ++ + L + ++ ++++ + V++GF Sbjct: 418 FLIMILISSFLNAIYYLPIIIAAFLKESNERDNVMVLDRLPKTMMYPMVIIAIGCVVMGF 477 Query: 481 YPQPILDTSHSAI 493 +P ++D A+ Sbjct: 478 FPHIVMDVVERAV 490 >UniRef50_A0EYN0 NADH-ubiquinone oxidoreductase chain 4 n=2 Tax=Xenoturbella bocki RepID=A0EYN0_XENBC Length = 456 Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats. Identities = 118/409 (28%), Positives = 197/409 (48%), Gaps = 13/409 (3%) Query: 81 LAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKY----QGFFHLNLMWILGGVIGVFLAIDM 136 +++D +S +++L+ L L +L S ++ + F + +I F + Sbjct: 54 MSLDFISSPLMILSAWLAPLMMLASKAHMKDKTKVQKKIFLTITSLLQMTLIMTFTVNEW 113 Query: 137 FLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVH 196 LFF +E L+P LI +G + K R+ A++ F IYT L +L +++ L Sbjct: 114 VLFFIMFETTLIPTLTLITKFGAQ----KERLIASSYFMIYTLCGSLPLLTSLMIL---- 165 Query: 197 YNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGS 256 TG L ++ ++ + + F +KMP+ +H WLP AH +AP AGS Sbjct: 166 NTKTGTSNMMVLTLQTDGVNMYMKNMWWMISLTGFFIKMPLFSVHLWLPKAHVEAPVAGS 225 Query: 257 VDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIA 316 + LA +LLK YGLLR + P ++ I M L + G + + QTD+K LIA Sbjct: 226 MILAAVLLKMGGYGLLRMAPIFNPFSTLLTNKIIMALALWGTLMTSMICLRQTDLKSLIA 285 Query: 317 YTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGG 376 Y+SV+HM AI + ++QGA MIAHGL+++ LF L +YER HTR+M + G Sbjct: 286 YSSVAHMSMTTAAILIMTSWSWQGAYNMMIAHGLTSSLLFALANTIYERSHTRNMTITRG 345 Query: 377 LWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYS 436 M + + ++ + +P T NF+GE M++F + +++ V ++YS Sbjct: 346 YKILMPSMYMWWMLAMLSNMSLPPTMNFLGEIMMIFSLMNWSVLTVLVTAVATVMTALYS 405 Query: 437 LAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPI 485 L + GK + M E+ L+ ++ L L+ P+ I Sbjct: 406 LYTVIMTQHGKPMNN-NKNPTNSMKSTEMMNSLMHILPLTLMITMPEII 453 >UniRef50_B3DZT1 NADH dehydrogenase subunit M n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DZT1_METI4 Length = 488 Score = 275 bits (705), Expect = 3e-72, Method: Composition-based stats. Identities = 138/476 (28%), Positives = 240/476 (50%), Gaps = 22/476 (4%) Query: 28 PRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFG---ISIHLAID 84 R AL L SL L+ Q L+ +Q D WI I H+ +D Sbjct: 24 ARQAALWASLLNFLASLWLYFQYDPHLS------GYQFVQDNRWIQLPALPEIHYHVGVD 77 Query: 85 GLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWE 144 G++L +V+LT ++ + AV+ S + I++ F+ L+ I G +G F+++D+F F+ F E Sbjct: 78 GINLPLVLLTTVVTLAAVIVSPRGIKREP-EFYSYLLAISLGALGAFVSLDLFFFYIFHE 136 Query: 145 MMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWT 204 LVP + LI +WG + R + + +Y +++L+ ILAL+ + T Sbjct: 137 FALVPTFLLIGIWGSE-----NRQFVSLQITLYLIVGSMILLVGILALLVLLPPEA--RT 189 Query: 205 FNYEELLN----TPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLA 260 F+ L++ P+ E L + F + + P + W P ++ APT ++ A Sbjct: 190 FDIPTLVDYVRLHPLPIMKEPLAFGFLLVGFGTLVSLFPFYTWAPSGYAVAPTPAAMLHA 249 Query: 261 GILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSV 320 G+L K YGLLR ++PL P + + L + I Y ++ AQ ++ ++ Y+SV Sbjct: 250 GVLKKFGLYGLLRLAIPLLPGGLEHWKALLYALLLGNILYIGYVTIAQKELTTMLGYSSV 309 Query: 321 SHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSK 380 HMG++ + + T + + G V+ M+AHGLS A LF L G++ ++ +GGL + Sbjct: 310 MHMGYLFLGLATWNTIGLSGVVLLMVAHGLSIALLFALAGEIKDKTGEIKFSELGGLGQR 369 Query: 381 MKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAML 440 M ++ + + A++G+PG NF GE +I FGS++V P IT ++ +G+V ++VY L + Sbjct: 370 MPFVSVAFILASFASIGVPGLANFAGELLIFFGSWKVQPWITALAIWGIVISAVYQLRAV 429 Query: 441 HRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNI 496 +FGK + E +R F LLL+ L+++G P +L + + Sbjct: 430 QSVFFGKLPPHLKEVEDVQGIMR-KFPYLLLMSFLLIIGMMPGSLLSVIKPTLEHY 484 >UniRef50_D2QWL0 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QWL0_9PLAN Length = 703 Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats. Identities = 107/332 (32%), Positives = 164/332 (49%), Gaps = 22/332 (6%) Query: 199 ATGVWTFNYEELLNTP----------MSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAH 248 AT V +FN L + +++ + FI F +K+P VP H WLPDAH Sbjct: 335 ATPVHSFNLLALAAMGQHTTLFDGEILGQSLQWWAFILLFIGFIIKVPSVPFHTWLPDAH 394 Query: 249 SQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQ 308 +APT S+ LAG+LLK YG++R P+ P E + LGV+ + YGA+ A AQ Sbjct: 395 VEAPTPISMILAGVLLKMGGYGIIRICYPICPAGGYELMYLVCTLGVVSMVYGAFAALAQ 454 Query: 309 TDIKRLIAYTSVSHMGFVLIAIYTGSQ------------LAYQGAVIQMIAHGLSAAGLF 356 D KR++AY+SVSHMG+V + + S + QGA+ QMI HG+S+AG+F Sbjct: 455 KDFKRMVAYSSVSHMGYVTLGLGVWSATAGNYYNADYWNMGVQGAMFQMIGHGVSSAGMF 514 Query: 357 ILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ 416 + G +Y+R+H R++ GGL+ KM A+++ A LG+PG F GE ++ ++ Sbjct: 515 FMVGIIYDRVHHRNLEEFGGLFGKMPVYTAMAMGLFFAALGLPGLCGFPGEVFVVLSVWK 574 Query: 417 VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLV 476 V+ V S ++ + Y L + R Y G L +LRE + L+V + Sbjct: 575 FSMVLAVFSASVVILTAAYILWAMQRVYLGAEYKGPHGDHLHPTNLRENMIGFTLLVFAI 634 Query: 477 LLGFYPQPILDTSHSAIGNIQQWFVNSVTTTR 508 + G +P +L I + Sbjct: 635 IFGVFPYTVLQYMEKTITRQVNDLAAWTRDVK 666 Score = 161 bits (408), Expect = 6e-38, Method: Composition-based stats. Identities = 73/227 (32%), Positives = 118/227 (51%), Gaps = 13/227 (5%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLW---LQGGYSLTQS 57 +LL ++ +P + L + R++ L L L++ L S Sbjct: 7 LLLTAIVFLPALSAILIALLPSNKPDLIRFVTLGVTIAVLILTVLGLMDPLGWQASTKFD 66 Query: 58 AGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFH 117 + QS F++ WIP F I + +DG+S +V+LT + VLA+ SW + +G + Sbjct: 67 VAQAEMQSAFNVAWIPSFDIEYFMGMDGISFPLVMLTAFVSVLAMGASWSITKAVKG-YC 125 Query: 118 LNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIY 177 + + + G++GVFLA+D FLF+ FWE+ML+PMYFLI +WG G + AA KFF+Y Sbjct: 126 ILFLLLETGMLGVFLALDFFLFYVFWEVMLLPMYFLIGVWG-----GPRKEYAAIKFFLY 180 Query: 178 TQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLM 224 T A ++ML+AIL L F ++ + + E L +P + + M Sbjct: 181 TLAGSVLMLVAILMLYF----SSDLRVLSDEYLAGSPADRPIRWSEM 223 >UniRef50_B4SLF9 NADH dehydrogenase (Quinone) n=20 Tax=cellular organisms RepID=B4SLF9_STRM5 Length = 943 Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats. Identities = 105/440 (23%), Positives = 185/440 (42%), Gaps = 27/440 (6%) Query: 69 MPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI--EKYQGFFHLNLMWILGG 126 +PW+P+ G+ L +DGL+ + L +G L VL + + + F+ L+ +G Sbjct: 62 VPWLPQIGLDFTLRLDGLAWMFAGLVLGIGALVVLYARYYLSSQDNAHRFYTYLLLFMGA 121 Query: 127 VIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVML 186 ++G+ ++ ++ L FWEM + + LI W H+ + A Sbjct: 122 MLGMVVSGNLLLLMIFWEMTSISSFLLIGFWSHRQDAREGARMA--------LVITGGGG 173 Query: 187 IAILALVFVHYNATGVWTFNYEELLNTPMSSGVEY-LLMLGFFIAFAVKMPVVPLHGWLP 245 +A+L V + G + + + + Y + K P H WLP Sbjct: 174 LALLGGVLLIGRIVGSFDLDVVLAAGEQIRASALYPYALFLVLAGIFTKSAQFPFHFWLP 233 Query: 246 DAHSQAPTAGSVDL-AGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWM 304 A + APT S L + ++K + L R L S F +G + + GAW Sbjct: 234 HAMA-APTPVSAYLHSATMVKAGVFLLARLHPAL--AGSDLFFYTVSGIGALTLLIGAWN 290 Query: 305 AFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYE 364 A Q D+K L+AY+++SH+G + + + +A V ++ H A LF+ G + Sbjct: 291 AIFQHDLKGLLAYSTISHLGLITLLFGLSTPMAVVAGVFHILNHATFKASLFMAAGIIDH 350 Query: 365 RIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVV------ 418 TRDMR +GGL M + AL++ ++A G+P F+ + M+ + Sbjct: 351 ETGTRDMRKLGGLRRLMPFTSALAIIASLAMAGIPLLNGFLSKEMLFAEALTAGGGPGAM 410 Query: 419 -PVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVL 477 +++ + VF YSL +H +FG + + LLVV+ V Sbjct: 411 RTAVSIAALLAGVFGVAYSLRFVHDTFFGPGPHDLDRVP-HEPPRWMKVPVELLVVICVA 469 Query: 478 LGFYP----QPILDTSHSAI 493 +G P P+L + ++I Sbjct: 470 VGIAPALTVAPVLHAAAASI 489 >UniRef50_Q5N0H9 NADH dehydrogenase subunit 4 n=7 Tax=Cyanobacteria RepID=Q5N0H9_SYNP6 Length = 513 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 163/510 (31%), Positives = 264/510 (51%), Gaps = 22/510 (4%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 M+L LI +G L + ++ RW A+ L LS L + + Sbjct: 1 MMLVLLITA-ILGASLLSLGSQDSAQIRRW-AIAAASAILVLSGSLLMGFD------PAV 52 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 + Q D W+P GI L +DGLSL +++L+ LL +LA+ S + + + + L Sbjct: 53 AEPQQAIDWGWLPSLGIHFSLGLDGLSLPLLLLSSLLTLLAIASSPTDQTRPRLCYSLIF 112 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + G+ L+ D+ LF +E+ L+PMY LI++WG G+ R AAT+F I+T Sbjct: 113 LA-AAGMAIALLSRDLLLFVLGYELELIPMYLLISIWG-----GEQRGPAATRFLIFTAI 166 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 SG+++L+ +A + ++F +++L + ++ L+L F AFA+K+P+VP Sbjct: 167 SGILLLLGAIATAVLSSQP---FSFAFDQLQTIELPLALQLPLLLLFVAAFAIKLPLVPF 223 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H W P A+ QA A ++ L G + K YGL RF FP A + AP L + Y Sbjct: 224 HSWQPAAYGQASPAIAMLLGGAIAKLGGYGLFRFGCSFFPEAWSLIAPSLAVLAAVTALY 283 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 G+ A QTD++RL+A++S+ HMG +L+A+ G+ LA Q A+ QM+AHGL A LF L G Sbjct: 284 GSLNALRQTDLQRLVAFSSIGHMGTLLLALAAGTPLALQRAIAQMVAHGLILALLFQLVG 343 Query: 361 QLYERIHTRDMRMMGGLWSKMK---WLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV 417 + RD + GL + ++ L L A+A+ G+PG FV EF+I GSF + Sbjct: 344 TIERVTGRRDRDQLSGLLNPIRGLPLTAGLLLLAAMASAGIPGLVGFVAEFLIFQGSFAI 403 Query: 418 VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVL 477 P TV +VY +++++RA FGK +Q A +++ E + ++L + ++ Sbjct: 404 FPWATVGCIAASGLTAVYFVSLINRACFGKLDNQEARWR--PVTVSERWPAVVLALTVMA 461 Query: 478 LGFYPQPILDTSHSAIGNIQQWFVNSVTTT 507 LG PQ ++ S S+ I + +T Sbjct: 462 LGLAPQGLVRWSESSSLAIAAHLPQPLQST 491 >UniRef50_B3EIA1 Proton-translocating NADH-quinone oxidoreductase, chain L n=27 Tax=cellular organisms RepID=B3EIA1_CHLL2 Length = 770 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 113/520 (21%), Positives = 210/520 (40%), Gaps = 51/520 (9%) Query: 5 WLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQ 64 ++L+P + + + + +I + +G T ALSL ++ A W Sbjct: 10 AVLLLPLLSFVILIFFNKRLPRRGDFIGVGILGTTFALSLYIFWSVVVQAYDPAFRVAWD 69 Query: 65 SEF----DMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI--EKYQGFFHL 118 + ++P + I + + ID L+ +M+ + L+ L L S + + G F Sbjct: 70 FTWIDLGNVPGVGPLVIKMGIVIDNLTAIMLAMVTLISFLVHLYSTGYMAGDPRYGRFFA 129 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 L ++G+ L+ ++F + FWE++ + Y LI + K S + A F+ Sbjct: 130 YLGIFTFSMLGIVLSDNLFAIYIFWELVGLSSYLLIGFYFEKDSAADAQKKA----FLAN 185 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 + + M + IL L + + F MS + F+ K Sbjct: 186 RVGDIGMWLGILILYSQFHTFSYQEIFANLAAGKFGMSQAWLTAAGILLFMGCVGKSAQF 245 Query: 239 PLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 PLH WLPDA + PT S A ++ Y + R + L +A + ++G Sbjct: 246 PLHVWLPDAM-EGPTPVSALIHAATMVAAGVYFVARIFVLLTADALH----VIAFIGAFT 300 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 F A +A Q DIKR++AY++VS +G++++ + G AY A+ ++ H A LF+ Sbjct: 301 AFMAATIAITQHDIKRVLAYSTVSQLGYMVLGLGVG---AYSAALFHLVTHAFFKACLFL 357 Query: 358 LCGQLYER-IHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSF- 415 G + H +DMR MGGL M W A +A G+P T F+ + IL G+ Sbjct: 358 GSGAIIHAMHHEQDMRWMGGLRKNMPWTFATFTLATLALAGLPLTSGFMSKDAILAGAIG 417 Query: 416 -------QVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIAS-------------- 454 + +I + F + + Y + +FG++++ + Sbjct: 418 FANAEGGGIYYLIPFLGFFSAMLTAFYMGRQIWLVFFGESRTHLKPADDHHHGHDAHAAH 477 Query: 455 ---------QELPGMSLRELFMILLLVVLLVLLGFYPQPI 485 + ++ +++L L + + P P+ Sbjct: 478 GHDDHHEEAHGVHEVAWNMRTPLVILAALSIFAVYSPDPL 517 >UniRef50_UPI00005100B6 putative monovalent cation/H+ antiporter subunit A n=1 Tax=Brevibacterium linens BL2 RepID=UPI00005100B6 Length = 1024 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 112/505 (22%), Positives = 204/505 (40%), Gaps = 37/505 (7%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 M+L + L I + R + W L + L + G ++ T + + Sbjct: 1 MILTVVALAALI--IVTPFITRVLGRASGW---------LLAAAYLGIAGLFTPTAAEVM 49 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQG-FFHLN 119 E WIP FG+ + L DG+ ++ + ++G + + S +++ + F+ Sbjct: 50 AGSTPEVSYQWIPAFGVDLALRADGIGVIFTYIALIIGAVVFVYSTGYLDRGRNTSFYWL 109 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 ++ ++ + L+ D+ + F WE+ + +FLIA G A + T Sbjct: 110 MVIFTFSMVMLVLSNDLLVLFVCWELTSLASFFLIARSGSPGQAP------ALRTMFITF 163 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSG---VEYLLMLGFFIAFAVKMP 236 GL +L+A ++ V T N E L++P+ S V L+ + +A K Sbjct: 164 IGGLSLLVATGVIIAV------TGTTNVHEALSSPVWSAQSPVTSLVAVLIAVAAMTKSA 217 Query: 237 VVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVI 296 P H WLPDA + A + A ++K + LLRF+ +A+ + + + G+I Sbjct: 218 QFPFHSWLPDAMAAATPVSAYLHAAAVVKAGIFLLLRFTPAF--HATPAWNTLLIVAGLI 275 Query: 297 GIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLF 356 G W A Q D+K+L+AY++VS +G + I GS+ A A + +IAH L +GLF Sbjct: 276 TACIGGWFALNQYDVKKLMAYSTVSQLGLITAVIGIGSEAAIAAATLHVIAHALFKSGLF 335 Query: 357 ILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILF---- 412 ++ G + TR++ + L + + + G+P FV + + Sbjct: 336 MMVGVVDHLAGTRELTRIPQLMRAAPASFIVMIVGCASMSGIPPLLGFVSKEALFTAFGD 395 Query: 413 --GSFQVVPVITVISTFGLVFASVYSLAMLHRAYF--GKAKSQIASQELPGMSLRELFMI 468 GS +++ V Y + A+ P M + I Sbjct: 396 TPGSAWTGWAALLVAVGASVLTFAYCAKTVWGAFIDGKPVDRARLGHGSPVMLIAAAVPI 455 Query: 469 LLLVVLLVLLGFYPQPILDTSHSAI 493 L + L L + PI +A+ Sbjct: 456 LASIPLSFALFVFDNPISQAVRAAL 480 >UniRef50_C8NJU8 NADH ubiquinone oxidoreductase subunit 5 (Chain L)/multisubunit Na+/H+ antiporter, A subunit n=16 Tax=Corynebacterineae RepID=C8NJU8_COREF Length = 1018 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 113/503 (22%), Positives = 203/503 (40%), Gaps = 30/503 (5%) Query: 15 FLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPR 74 F + R + GL + + Y Q + W+P Sbjct: 6 LALTAAAVFAPLLIRTLGRPAFGLLALVPAAGFFWVAYEFIQGTFRDGGELLLHYDWMPS 65 Query: 75 FGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLN---LMWILGGVIGVF 131 ++I + +D L+ L ++ +G L +L W + G L+ + G+ Sbjct: 66 VHLNITMRLDSLAALFSLIILGVGALVLLYCWGYFDSNPGRLSAFGGQLVGFAMAMYGLV 125 Query: 132 LAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILA 191 ++ ++ L + FWE+ V + L+ +G +AS ++ A + T GL ML+ I+ Sbjct: 126 ISDNILLMYVFWEITSVLSFLLVGYYGERASSRRSAGQA----LMVTTLGGLAMLVGIIL 181 Query: 192 LVFVHYNATGVWTF-NYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQ 250 + TGVW F + + L K + P H WLP A + Sbjct: 182 IGV----QTGVWYFSDVPAFEGNWADVPYISIGALLILAGALSKSAIAPTHFWLPGAMA- 236 Query: 251 APTAGSVDL-AGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQT 309 APT S L + ++K Y + R + N + + I + LG+ + WMA Q Sbjct: 237 APTPVSAYLHSAAMVKAGIYLVARLAPDF--NVVSSWYLITLPLGIFTMIMSGWMALRQK 294 Query: 310 DIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTR 369 D+K ++AY +VS +GF++ G++ A + +H L A LF++ G + TR Sbjct: 295 DLKLILAYGTVSQLGFIISVAGIGTREALLAGLALTFSHSLFKATLFMVVGAIDHTTGTR 354 Query: 370 DMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFM-----ILFGSFQVVP--VIT 422 D+ + GLW + + AL+ A + G+P F+ + + G + +P ++ Sbjct: 355 DINQLSGLWRRQPLMFALAAISAASMAGIPPLFGFIAKETAIDSVLYEGMLRGMPGNLML 414 Query: 423 VISTFGLVFASVYSLAMLHRAYFGKAK-------SQIASQELPGMSLRELFMILLLVVLL 475 G +F YSL L+ A+ K + A E ++ + +L L Sbjct: 415 AGIILGSIFTMAYSLYFLYGAFATKRQLFPRNNGVSTAVAESHPVAFKLWIAPFILTSLT 474 Query: 476 VLLGFYPQPILDTSHSAIGNIQQ 498 VLLG +P P+ + + N+ Sbjct: 475 VLLGLFPAPLSAPIVTHLDNVTP 497 >UniRef50_C0A9K9 NADH dehydrogenase (Quinone) n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A9K9_9BACT Length = 821 Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 110/500 (22%), Positives = 202/500 (40%), Gaps = 33/500 (6%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL I PF+ + R+ W AL+ ++ + + Sbjct: 4 LLIIAIFAPFVWLPVTAFAGRWLGSRTAWFALVAPVVSTVI---------LAALALDARA 54 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQ---GFFHL 118 Q+ ++PWIP G+++ +DGLSL ++ +GVL L + ++ + G F+ Sbjct: 55 GAQTVVEIPWIPSLGLNLTFLVDGLSLFFALVVSGMGVLVALYAAAYLDDHYEWHGRFYA 114 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 L+ +G ++G LA ++ L F FWE+ + + LI K A + T Sbjct: 115 YLLLFMGAMLGTVLAGNLLLLFVFWELTGIASFLLIGFLHDKEESRSGARMA----LLVT 170 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 +GLVML + P S G+ + + + K Sbjct: 171 GLTGLVMLAGVALTGIAAGTWDLATLLAKGGEAFGPDSRGLLSVAFVLLAVGAMGKSAQF 230 Query: 239 PLHGWLPDAHSQAPTAGSVDL-AGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 P H WLP+A + APT S L + ++K + + R P+F +A + P+ + +G Sbjct: 231 PFHFWLPNAMA-APTPVSAYLHSATMVKLGVFFVARV-FPIFSDADL-WMPLLVTVGFGT 287 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGA---VIQMIAHGLSAAG 354 + + A D+K ++A+++V+ +G ++ GS+ G ++ + +H Sbjct: 288 MALASLFALLSHDLKAILAWSTVTTLGMLIGFYGMGSRTGANGVQGDLLHVASHVFFKGA 347 Query: 355 LFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILF-- 412 LF+ G + TRD+R +GGL ++ WL + A + G+PGT FV + L Sbjct: 348 LFMCAGIIDHATGTRDVRELGGLRRRLPWLAVVVTICAASMAGVPGTLGFVSKEYFLKAQ 407 Query: 413 -------GSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLREL 465 G ++ L +S ++ ++G A++ + L Sbjct: 408 MAFLAQGGGGGWAIYAVGLAWLALTLKVAFSARLVAHVFWGPLTPG-ATEHFHAPARLML 466 Query: 466 FMILLLVVLLVLLGFYPQPI 485 +L V VL G +P + Sbjct: 467 VPPAILAVACVLFGVWPAWL 486 >UniRef50_C7NST6 NADH dehydrogenase (Quinone) n=4 Tax=Halobacteriaceae RepID=C7NST6_HALUD Length = 801 Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 124/493 (25%), Positives = 209/493 (42%), Gaps = 45/493 (9%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L ++ +PF+ + R + + L L + G Sbjct: 8 VLLVVLALPFLAAAVAPLVYRLVGERVAYFGAAVAALAFGLIGTQYGAEG---------- 57 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF--FHLN 119 +PWIP +S+ L +DGLSLL+ + +G+L S + G F+ Sbjct: 58 ----VVSIPWIPSLDVSLALYVDGLSLLLGFVVSGIGILIFTYSGGYMHDEPGKAKFYTT 113 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 L+ +G ++GV A D+ F FWE+ V + LI + D AA K I T Sbjct: 114 LLVFMGAMLGVAFAADLLALFVFWELTSVSSFILIGHY----QDDPDSQYAARKAMIITV 169 Query: 180 ASGLVMLIAILALVFVHYNATGVWTF----------NYEELLNTPMSSGVEYLLMLGFFI 229 A GL +LIA L L V + G TF N + S+G+ ++ + Sbjct: 170 AGGLFLLIAFLLLHTVSADVMGTATFRLAGEGSMIENAGAMRERLRSAGLFVPVLALLAV 229 Query: 230 AFAVKMPVVPLHGWLPDAHSQAPTAGSVDL-AGILLKTAAYGLLRFSLPLFPNASAEFAP 288 A K VPLH WLP+A +APT S L + ++K Y + RF L S E+ Sbjct: 230 GAAAKSAQVPLHIWLPNAM-EAPTPVSAFLHSATMVKAGVYLIGRFRPLL---GSTEWEL 285 Query: 289 IAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAH 348 + LG++ + GA +A DIK L+AY++ SH+G ++ + + ++ H Sbjct: 286 LFAGLGLLTMTVGAMLAIKADDIKELLAYSTASHLGLIVAGFGIQYKYGAETGAFHILNH 345 Query: 349 GLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEF 408 L A LF++ G + +R + +GGLW + A+++ A+ G+P F + Sbjct: 346 ALFKAALFLVAGIVAHEAGSRLLSELGGLWRDLPITAAVAVVAALGMAGLPPFNGFYSKE 405 Query: 409 MILFGSFQVV-------PVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMS 461 ++ +F ++ V++ FG +F +YS+ L +FG + P + Sbjct: 406 LLFEATFHAAEHAGGLWWLLPVVAVFGSIFTFLYSIKFLS-LFFGDRPDALEHVHSPPLP 464 Query: 462 LRELFMILLLVVL 474 L ++L L Sbjct: 465 --MLAPPVILATL 475 >UniRef50_D2B4L0 NADH dehydrogenase (Quinone) n=17 Tax=Actinomycetales RepID=D2B4L0_STRRD Length = 537 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 164/459 (35%), Positives = 235/459 (51%), Gaps = 35/459 (7%) Query: 24 GVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAI 83 G ++ R AL G+T ALS+ L Y + Q D+ W+P + HL + Sbjct: 30 GGRLLRVHALAVSGITFALSVVLAAGFDY-----GDAARVQFSTDLAWVPGLDLRFHLGV 84 Query: 84 DGLSLLMVVLTGLLGVLAVLC-------------SWKEIEKYQGFFHLNLMWILGGVIGV 130 DG+SL +VVLT LL L + K L+ + G+IG Sbjct: 85 DGISLPLVVLTTLLTFLCSVYLCWGRADGPGQLLRPKSGGNRPRALVFTLLVLEVGMIGT 144 Query: 131 FLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAIL 190 FLA+D+ LFF F+E++L+PMYF+IA+WG G+ R AA KF +YT ++ +L Sbjct: 145 FLALDLLLFFVFFEVVLIPMYFVIAVWG-----GRARRAAAIKFILYTLL---GSVVLLL 196 Query: 191 ALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQ 250 L+ + + MSS V+ L + I AVK P+ PLH WLP AH++ Sbjct: 197 GLLLIWAQTGTLDMIALARAQGAGMSSSVQVLAFVAVGIGLAVKTPMWPLHTWLPAAHTE 256 Query: 251 APTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTD 310 APT GSV LAG+LLK YG R ++P+ P+ +A AP VIGI YG+ AQ D Sbjct: 257 APTVGSVLLAGVLLKMGTYGFARIAIPVLPDGAAAMAPWLGAFAVIGIVYGSLACLAQRD 316 Query: 311 IKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRD 370 +KR+IAY+S+ HMGFVL+ T + + GA+ IAHGL A LF + G + +R T D Sbjct: 317 LKRMIAYSSIGHMGFVLLGFATLTPVGINGALFGNIAHGLITALLFFIAGAIKDRYGTTD 376 Query: 371 MRMM-GGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSF--------QVVPVI 421 M + GG+ S++ L +L F AVA+LGMPG F GE + L G++ + Sbjct: 377 MPSLGGGMLSRLPHLGSLLTFAAVASLGMPGLAGFWGEMLALLGAYGPAAGLSRPLYLTF 436 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGM 460 + G V + Y L ML R G++ + + L + Sbjct: 437 MALGGLGTVLTAAYFLLMLSRVTHGRSVETVHAPVLAAV 475 >UniRef50_B2A693 Proton-translocating NADH-quinone oxidoreductase, chain M n=2 Tax=Clostridia RepID=B2A693_NATTJ Length = 499 Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats. Identities = 114/506 (22%), Positives = 226/506 (44%), Gaps = 26/506 (5%) Query: 5 WLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQ 64 ++LI F+ + +++L M L L +++ L ++ + + + + Sbjct: 10 IIVLIGIFVSFILPGLHFIKKNLNEYVSLSAMILMLVIAIYLVIEVSSNGPFTYVVGE-- 67 Query: 65 SEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQ-----GFFHLN 119 W P +GI + +D L + M ++ +G LA+L + +++ ++ Sbjct: 68 ------WAPPWGIEFN--VDYLGVYMTLIITGIGFLALLYASRDLHHELQENALSLYYPL 119 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 M ++ +IG+ L D+F F E+ L+ +I + + K I A+ K+ + Sbjct: 120 YMLLMASMIGMVLTNDIFNLFVLLEITLLTSVAIICV-----KENKDTIEASLKYLMLNA 174 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 +L+ I L + + + E +N V ++ FF+ F VK + P Sbjct: 175 LGSATVLMGIALLYIITGHLNMTY-IAQELAVNFEQYPTVIMAIVALFFVGFGVKSALFP 233 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAP---IAMWLGVI 296 +H WLPDAH AP+ S L+G+++K L+RF + P E P I +W Sbjct: 234 MHVWLPDAHGSAPSPSSAVLSGLVIKVYVVSLIRFYFIVLPEEILELMPVGEILLWFAAA 293 Query: 297 GIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLF 356 G+ G+ A AQ DIK+++AY+SV+ + +V + I S ++QG ++ ++ H + + LF Sbjct: 294 GMILGSMFAIAQEDIKKMLAYSSVAQISYVFLGIGLLSLTSFQGGLLHILNHAIIKSMLF 353 Query: 357 ILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ 416 ++ G + R + M G+ + + A A +G+PGT F+ ++ + G+ Sbjct: 354 LIAGAIIYTSGIRKISHMHGVGLRYPLIMICFTLGAFAMIGIPGTNGFISKWYLALGALD 413 Query: 417 VV-PVITVISTFGLVFASVYSLAMLHRAYFGKAK-SQIASQELPGMSLRELFMILLLVVL 474 P ++ + VY L ++ ++FG + + I + + + F I+L L Sbjct: 414 AGRPFFVLVILVSSLLNGVYYLPIVVNSFFGDMQDADINFIKCNKLPWQMFFPIVLCGFL 473 Query: 475 LVLLGFYPQPILDTSHSAIGNIQQWF 500 ++ +G YP L A+ + Sbjct: 474 IIFIGLYPALPLSLVEPAVEFLMPEL 499 >UniRef50_A6YHK2 NADH-ubiquinone oxidoreductase chain 4 n=3 Tax=Hexasterophora RepID=A6YHK2_9METZ Length = 472 Score = 270 bits (692), Expect = 7e-71, Method: Composition-based stats. Identities = 150/487 (30%), Positives = 246/487 (50%), Gaps = 16/487 (3%) Query: 1 MLLPWLILIPFIGGF-LCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAG 59 M L I P I L ++ + + I+ L L ++ L S + Sbjct: 1 MNLIKTITSPAITIITLILTSKTKYSNIKQNISKTAAILILIQTISLHTHTTNSKSHITI 60 Query: 60 IPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLN 119 I + D I IS L ID LS +++ LT LL + ++L S K I L Sbjct: 61 IFTSDTTIDNTKI----ISTRLTIDTLSTILMTLTALLILTSLLISEKTIYHTHTTLMLC 116 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 L L + F + F+ +E ++P+ +I LWG + K +I A F +YT Sbjct: 117 LFTTLLILFLAFTTSSLINFYITFESSVIPLIIIIGLWGSR----KEKIRATYYFLLYTI 172 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 L + IAIL L TFN + + + + LL LG F+AFA+K P++P Sbjct: 173 TGSLPLFIAILIL------HNKTGTFNATLIQHQTIDQQPQLLLFLGLFLAFAIKTPLIP 226 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 H WLP AH +AP GS+ LAGILLK YG +RF++P+ + + API + + +I ++ Sbjct: 227 WHAWLPLAHVEAPAIGSILLAGILLKLGTYGFIRFTIPILTHTTTFIAPIIITISIISMW 286 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 + + Q DIKR+IAY+S++HMG + A ++ + ++ +GA+I MI+HGL+++ LF+L Sbjct: 287 LASLNSLRQNDIKRIIAYSSIAHMGIITAACFSTNHISTKGAIILMISHGLTSSTLFLLV 346 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP 419 LYER +R ++ G L +L++ A+A + PGT NF+GE++ L G +++ P Sbjct: 347 SCLYERHKSRLLKSFQGSSYTTPTLSSLTIIAALAHMSTPGTTNFIGEYLCLVGLWELHP 406 Query: 420 VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLG 479 I++IS ++ + Y L + + K ++ +S +E+ L L + +G Sbjct: 407 SISIISIASIIITTAYLLLLYIQITSSKPPI-YTKYKIQDLSRQEIQATLTLTTPNIAIG 465 Query: 480 FYPQPIL 486 P PI+ Sbjct: 466 IIPYPII 472 >UniRef50_P55781 NADH-ubiquinone oxidoreductase chain 4 n=1187 Tax=Chordata RepID=NU4M_GADMO Length = 460 Score = 270 bits (692), Expect = 8e-71, Method: Composition-based stats. Identities = 121/398 (30%), Positives = 186/398 (46%), Gaps = 16/398 (4%) Query: 77 ISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIE----KYQGFFHLNLMWILGGVIGVFL 132 ++ ++ D LS ++VL+ L L +L S + Q + L + +I F Sbjct: 53 LNSYIGTDPLSTPLLVLSCWLLPLMLLASQNHLSSEPMNRQRMYITLLATLQLFLILAFG 112 Query: 133 AIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILAL 192 A +M +F+ +E L+P +I WG+ R+ A T F YT A L + L Sbjct: 113 ATEMIMFYVMFEATLIPTLLVITRWGNHTE----RLNAGTYFLFYTLAGSLPL----LVA 164 Query: 193 VFVHYNATGVWTFNYEELLNTPMSSGV-EYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQA 251 + + N TG + + + IAF VKMP+ +H WLP AH +A Sbjct: 165 LLMLQNNTGTLSLLIIPYAKPLLLMPFGSKIWWAACMIAFLVKMPLYGMHLWLPKAHVEA 224 Query: 252 PTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDI 311 P AGS+ LA +LLK YG++R + L P + P + L + G+ + QTD+ Sbjct: 225 PVAGSMVLAAVLLKLGGYGMMRLMIVLDPLSKEMVYPF-IVLALWGVIITGSICLRQTDL 283 Query: 312 KRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDM 371 K LIAY+SVSHMG V I + + GA+I MIAHGL+++ LF L YER H+R M Sbjct: 284 KSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLASSALFCLANTNYERTHSRTM 343 Query: 372 RMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVF 431 + GL + + ++A L +P N +GE MIL F +++ G + Sbjct: 344 LLARGLQIALPLMTTWWFIASLANLALPPLPNLMGELMILTSLFNWSAWTLILTGIGTLI 403 Query: 432 ASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMIL 469 + YSL M + G + + LP RE ++ Sbjct: 404 TAAYSLYMFLMSQRGPLPQHMLA--LPPSYTREHLLMA 439 >UniRef50_C0XU58 CPA3 family monovalent cation (K+ or Na+):proton (H+) antiporter-3, MnhA subunit n=1 Tax=Corynebacterium lipophiloflavum DSM 44291 RepID=C0XU58_9CORY Length = 954 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 114/496 (22%), Positives = 203/496 (40%), Gaps = 37/496 (7%) Query: 6 LILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQS 65 ++L PF+G L G +AL +G + +L Sbjct: 13 VVLAPFVGRVL-------GRNAGWMLALPLLGAAVIGALAYVSPSAGDA----------H 55 Query: 66 EFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILG 125 + WIP + L IDGLS++ ++L L+G + S + + + + F+L + Sbjct: 56 AETVAWIPSLNVDFALRIDGLSIVFLMLVLLIGAGVLAYSTRYLHQSKPSFYLLMCGFAA 115 Query: 126 GVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVM 185 + + L ++ +F+ WEM + +FLIA G K A + + T GL++ Sbjct: 116 AMSTLVLTDNLVVFYIAWEMTTLCSFFLIANGGEKGYAP------AIRTLLVTVGGGLLL 169 Query: 186 LIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLP 245 L A + + + E P G+ L+ L A K P WLP Sbjct: 170 LTATVIMCITTGSTQLSVVLADETWTQRP---GLTTLVALLVAGAAFTKSAQFPFQAWLP 226 Query: 246 DAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMA 305 D+ + A ++K Y +LR+S P+F A + + G+I +GA A Sbjct: 227 DSMVAIAPVSAYLHAAAMVKAGIYLILRYS-PMFA-AVDAWHIALVTAGLITSLFGAMTA 284 Query: 306 FAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYER 365 Q+D+K L+AY+++S +G ++ + G+Q A A++ IAH + A LF+ G + Sbjct: 285 VKQSDLKALLAYSTMSQLGLLVAVVGIGTQEALTAAIVHTIAHAVFKAALFMSIGIVEHE 344 Query: 366 IHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV------VP 419 TR+ + L +M A+ + A + G+P FV + M+L V Sbjct: 345 TGTRNFHELRNLRVRMPVTQAIVVISAASMAGLPPLAGFVSKEMLLAAGLSAPHKEALVT 404 Query: 420 VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIA--SQELPGMSLRELFMILLLVVLLVL 477 ++T +F YS + G ++Q++ S+ + S + +L V Sbjct: 405 LVTGGIVVTSIFTFAYSYRYVLGV-LGDRRNQLSGTSKTVGEASPSFFAVPAILAAATVA 463 Query: 478 LGFYPQPILDTSHSAI 493 +G YP + A+ Sbjct: 464 IGIYPHMLNGPVADAV 479 >UniRef50_B3QY40 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QY40_CHLT3 Length = 772 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 115/469 (24%), Positives = 202/469 (43%), Gaps = 39/469 (8%) Query: 7 ILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSE 66 +L+P + + ++ + +G++LALSL ++ + W Sbjct: 13 LLLPLLSFTFLIFFNGKLPRKGDFVGVGLVGISLALSLYIFTSVVFGEYDPNFKVGWSFT 72 Query: 67 F----DMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI--EKYQGFFHLNL 120 + ++P + IS+ + ID L+ +M+V+ L+ L + S + +KY G ++ L Sbjct: 73 WLDFGNVPGVGPLTISMGILIDNLTAIMLVVVTLISFLVHIFSMGYMAGDKYYGRYYAYL 132 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 ++G+ L+ ++F + FWE++ + Y LI + K S + A F+ + Sbjct: 133 GIFTFSMLGIVLSDNLFSIYIFWELVGLSSYLLIGFFFEKDSAADAQKKA----FLTNRV 188 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELL------NTPMSSGVEYLLMLGFFIAFAVK 234 + M + IL L + TF YEE+ N +S L F+ K Sbjct: 189 GDIGMWLGILILY------SQFHTFGYEEIYQNIQDGNFTLSEAWLTAGGLLLFMGCVGK 242 Query: 235 MPVVPLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWL 293 PLH WLPDA + PT S A ++ Y + R FP S + + ++ Sbjct: 243 SAQFPLHIWLPDAM-EGPTPVSALIHAATMVAAGVYFVARI----FPILSVDALHVIAFI 297 Query: 294 GVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAA 353 G F A +A Q DIKR++AY+++S +G++++ + G AY A ++ H A Sbjct: 298 GAFTAFMAATIAITQHDIKRVLAYSTLSQLGYMVMGMGIG---AYAPAFFHLVTHAFFKA 354 Query: 354 GLFILCGQLYERI-HTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILF 412 LF+ G + H +DMR MGGL M W A +A G+P T F+ + IL Sbjct: 355 CLFLGSGAVIHATHHEQDMRWMGGLRKNMPWTFATFTIAMLALSGLPMTSGFMSKDAILA 414 Query: 413 GSF-------QVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIAS 454 GS +I V + + Y + +FG+ ++ + Sbjct: 415 GSLGFANVEGGFYYLIPVFGFGAAMLTAFYMGRQMWLVFFGENRAHLKP 463 >UniRef50_C5CEV1 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CEV1_KOSOT Length = 492 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 133/482 (27%), Positives = 221/482 (45%), Gaps = 27/482 (5%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 M++P+L++IP GFL R +P IAL LA+SL L+ ++ I Sbjct: 1 MIIPYLVIIPLAAGFLIVLLGRKNKVLPELIALTATFSLLAISLLLFPMIE---SEGGAI 57 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF--FHL 118 S + +P+ +I ID LS +V + L VL+ + S + K+ G ++ Sbjct: 58 LYELSGWKIPY------TISFVIDYLSAFLVTMVSALAVLSTIYSVGYMRKFSGIWNYYA 111 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 LM ++ G+ GV + D+F F F E+ L+ Y L+A G AA K+ I + Sbjct: 112 LLMLMITGLNGVAITGDLFNLFVFMEIALIATYALVAFHGE-----AEHYEAAFKYAIMS 166 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 S ++L I + + + T ++ N + G L+ F F +K + Sbjct: 167 SLSSSLVLFGIGCVYSMTSSLT------LMQISNKMIGVGETNLVYALFLTGFGLKAAMF 220 Query: 239 PLHGWLPDAHSQAPTAGSVDLAGILLK-TAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 P H WLPDAH AP+ S L+G+L+K AY L+R +F S + + G + Sbjct: 221 PFHSWLPDAHPSAPSPVSAMLSGVLIKVLGAYTLIRVFYMVF-GVSELVKELFLIFGTLS 279 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 + GA +A Q DIKR++ ++SVS MG+++ A+ G+ L GA+ M+ H + LF+ Sbjct: 280 MVIGALVAVMQKDIKRMLGFSSVSQMGYIIFALGIGTPLGVLGAIYHMLNHAVLKGLLFM 339 Query: 358 LCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV 417 G + TRDM M G+ + + SL ++ G+P G F + +I+ + Sbjct: 340 DAGAVELIEGTRDMEEMKGVSDRTTY--VTSLMASLGISGVPPFGGFFSKLIIITAAIYT 397 Query: 418 VPVI-TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLV 476 I +I+ V Y L ML +A+ + K LP + ++ +L + Sbjct: 398 GKFIYAIIALAVSVITLGYYLGMLKKAFRKRNKEVNDKGSLPASLKIPMIILAVLTLATA 457 Query: 477 LL 478 L Sbjct: 458 LF 459 >UniRef50_Q2FZV1 Na(+)/H(+) antiporter subunit A1 n=72 Tax=Bacillales RepID=MNHA1_STAA8 Length = 801 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 121/534 (22%), Positives = 231/534 (43%), Gaps = 52/534 (9%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL +++P I + RF ++ L L + + + +++ T S Sbjct: 3 LLHIAVILPLIFALIIPILYRFFKRIH----LGWFVLPVPIVIFIYMLTLIKTTMSGNT- 57 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQ--GFFHLN 119 + W+P FG++ L +DGL LL +L +G L VL S + K + G F+ Sbjct: 58 ---VMKTLNWMPHFGMNFDLYLDGLGLLFSLLISGIGSLVVLYSIGYLSKSEQLGNFYCY 114 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 L+ +G ++GV L+ ++ + + FWE+ + LI+ W + + I A K I T Sbjct: 115 LLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFW----RERQASIYGAQKSLIITV 170 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTP---MSSGVEYLLMLGFFIAFAVKMP 236 + L + A +F+ + ++ +S M+ I K Sbjct: 171 F------GGLSLLGGIILLAIPTQSFSIQYMIQHASEIQNSPFFIFAMILIMIGAFTKSA 224 Query: 237 VVPLHGWLPDAHSQAPTAGSVDL-AGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGV 295 P + WLPDA +APT S L + ++K Y + R + P+F AS + +G+ Sbjct: 225 QFPFYIWLPDAM-EAPTPVSAYLHSATMVKAGLYLIARMT-PIFA-ASQGWVWTVTLVGL 281 Query: 296 IGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGS-------------QLAYQGAV 342 I +F+ + A Q D+K ++A+++VS +G ++ + G+ A+ A+ Sbjct: 282 ITLFWASLNATKQQDLKGILAFSTVSQLGMIMAMLGIGAISYHYQGDDSKIYAAAFTAAI 341 Query: 343 IQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTG 402 +I H LF++ G + TRD++ +GGL + M +++ A++ G+P Sbjct: 342 FHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTIMPISFTITVITALSMAGVPPFN 401 Query: 403 NFVGEFMILFGSFQVV-----------PVITVISTFGLVFASVYSLAMLHRAYFGKAKSQ 451 F+ + L +F + +I G VF VYS+ + +FG+ K + Sbjct: 402 GFLSKESFLETTFTASQANLFSVDTLGYLFPIIGIVGSVFTFVYSIKFIMHIFFGQYKPE 461 Query: 452 IASQELPGMSLRELFMILLLVVLLVLLGFYPQPILD-TSHSAIGNIQQWFVNSV 504 ++ +S+ L +L L+++ G +P + + A +I ++ V Sbjct: 462 QLPKKAHEVSILMLLSPAILATLVIVFGLFPGILTNSIIEPATSSINHTVIDDV 515 >UniRef50_A4X1Y9 Proton-translocating NADH-quinone oxidoreductase, chain M n=3 Tax=Micromonosporaceae RepID=A4X1Y9_SALTO Length = 503 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 160/439 (36%), Positives = 235/439 (53%), Gaps = 19/439 (4%) Query: 65 SEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCS-WKEIEKYQGFFHLNLMWI 123 + D+PW+P + HL +DG+S +VVLT LL +L + WK G + L+ + Sbjct: 72 HQVDLPWVPGLDLRFHLGVDGISWPLVVLTALLTLLCCGYTLWKVPSGGSGRALVALLLV 131 Query: 124 LG-GVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 + G++G FLA+D+ LFF F+E++L+PMY +I WG G R AA KF +YT Sbjct: 132 VEVGILGTFLALDLVLFFVFFEVVLLPMYAIIVGWG-----GPDRYRAARKFALYTLL-- 184 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLN-TPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 ++L LV V T T + L T +S G + +AFAVK P+ PLH Sbjct: 185 ----GSVLLLVGVMVVVTAAGTADIVALTGGTGLSRGPQLAAFTLLALAFAVKSPLWPLH 240 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLPDAH+QAPT GSV LAG+LLK YGL+R ++ + P + AP+ L V I G Sbjct: 241 SWLPDAHTQAPTVGSVILAGVLLKMGTYGLIRVAVGVAPEGAEWAAPVLGVLAVAAILVG 300 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 + + AQT++KRLIAY+SV HMGFVL+ + T + + A+I IAHG+ LF L G Sbjct: 301 SLVCLAQTELKRLIAYSSVGHMGFVLLGVATLTGTGLRAALIGNIAHGVITGLLFFLAGA 360 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV---- 417 + +R HT D+ + GL L L F AVA+LG+PG F GE + + + Sbjct: 361 VKDRAHTGDLADLSGLRETAPRLAGLLGFAAVASLGLPGLAGFWGEAFAVIAAVRAGGPL 420 Query: 418 VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVL 477 + ++ G + Y L +L + G A S +A PG++ EL LV+L + Sbjct: 421 WLTLAALAALGGALTAAYLLRLLRQVTHGPASSAVARVG-PGVARAELLTWAPLVLLTLA 479 Query: 478 LGFYPQPILDTSHSAIGNI 496 +G P +L + + + + Sbjct: 480 VGLAPILVLGVAQAPVDAL 498 >UniRef50_B5YL24 NADH-quinone oxidoreductase chain m, putative n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YL24_THEYD Length = 479 Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats. Identities = 138/490 (28%), Positives = 238/490 (48%), Gaps = 21/490 (4%) Query: 5 WLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQ 64 +++ P +G FL W+ K+ IAL++ L+ ++L +L + +Q Sbjct: 6 LILIFPLLGAFLIWKIGI--RKIVNLIALMSSSLSFIMALIYYLNFDRT------KKGFQ 57 Query: 65 SEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWIL 124 WI + ++ L D ++ V+LT + + +L + K I+ F L+ + Sbjct: 58 FLTSYEWISAWQLNFTLGFDHINSPFVLLTTFITLAIILLATKTIKDKISSFMSLLLLLS 117 Query: 125 GGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLV 184 V F++ + FFFF+E ML+P LI WG G+ A+ KF IYT + Sbjct: 118 VSVNAFFMSTNFLQFFFFYEAMLIPAVLLIQRWG-----GENSFQASIKFLIYTFGFSIF 172 Query: 185 MLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWL 244 + +AI+A + +F++ L N +S + LL+ GF +AF VK+P+VPLHGWL Sbjct: 173 LFLAIIATYYYG------GSFSFTSLENLKISETAKLLLLFGFILAFFVKIPIVPLHGWL 226 Query: 245 PDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWM 304 DA+ +A ++ L+ +L K YG+LR +P F + + + +I Y A++ Sbjct: 227 KDAYYEAAMPVTIFLSAVLGKMGIYGILRV-IPYFNDILSVVNQWIILTCLISFVYSAFL 285 Query: 305 AFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYE 364 A +IK L AY S+SH+G + +TG+ YQG ++Q I HG+ AA LF + L Sbjct: 286 ALNSKNIKVLFAYMSLSHVGIITAGAFTGNLQGYQGVLLQSINHGILAAALFYVAELLNR 345 Query: 365 RIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVI 424 + D+ G L ++ L + +A G PG F GE ++L G F+ + I Sbjct: 346 ETKSFDLEKFGALSKRVPALTFFTFSLIMAMGGFPGLNYFNGELLLLSGIFRENLFLGFI 405 Query: 425 STFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQP 484 FG+ VY +R Y K +++++ + + ELF + +L+++ + LG P Sbjct: 406 GVFGVALGVVYLSWFFYRVYLRKPGAELSTY-VRDVISWELFFLAILLLISIYLGLNPDY 464 Query: 485 ILDTSHSAIG 494 +L + + Sbjct: 465 VLSGVNEIVS 474 >UniRef50_Q1IZW1 NADH-quinone oxidoreductase, M subunit n=3 Tax=Deinococcus RepID=Q1IZW1_DEIGD Length = 474 Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats. Identities = 139/437 (31%), Positives = 232/437 (53%), Gaps = 13/437 (2%) Query: 67 FDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGG 126 F + W+P GI+ +A+ G+SL + ++T L+ +AVL + + + G ++ + G Sbjct: 51 FSVNWVPALGITYSVALTGVSLALALVTALMTFIAVLYAARRVS-NPGTLLSLVLAMETG 109 Query: 127 VIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVML 186 +IG+F A D+ LF+ F+E L+P ++A++G G R+ A KF YT L+ML Sbjct: 110 LIGIFAARDLVLFYVFFEDALLPALLMLAIYG-----GPNRMRALVKFAAYTLFGSLLML 164 Query: 187 IAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPD 246 ++I+ + + G TF +L+ P+ + L LGF A AVK+P+ PLH WLPD Sbjct: 165 LSIIGVRYY----GGSPTFALVDLVQHPVQGVTQTWLYLGFLAAMAVKLPLWPLHAWLPD 220 Query: 247 AHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAF 306 H Q +G D+ G L K YGL +F LPLFP+AS E P+ M L Y AW+AF Sbjct: 221 FHEQNHASGVPDVMGTLYKVGGYGLFQFGLPLFPDASLELRPVLMGLAAFTALYAAWIAF 280 Query: 307 AQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERI 366 QT+ KRLIAY +SHMGFV + +++ ++ A GA+ + + LF+ G L ER+ Sbjct: 281 RQTNWKRLIAYAGLSHMGFVALGVFSLNETATIGAMYLLAFQNVYTGALFLAVGMLQERV 340 Query: 367 HTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVIST 426 + +GG+ ++ L L+L +A++ +PG F+GEF +L G++QV P + ++ Sbjct: 341 GSVH-TRVGGVMTQAGALGGLTLTLWLASIAVPGLAGFIGEFSVLLGAYQVQPWLAFVAG 399 Query: 427 FGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPIL 486 + A+ Y+L ++ + + + E ++ L + +++ G Y P L Sbjct: 400 LSSIAAAAYALTAFQTTFWQGRP--WGAVRVADLRHTEWLVLGLPLAVVLFFGVYSAPAL 457 Query: 487 DTSHSAIGNIQQWFVNS 503 + A+ + S Sbjct: 458 NLIQPAVRGVLAGLGGS 474 >UniRef50_B6YTX9 Hydrogenase 4, component F or formate hydrogen lyase, subunit 3 n=3 Tax=Thermococcus RepID=B6YTX9_THEON Length = 522 Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats. Identities = 123/509 (24%), Positives = 216/509 (42%), Gaps = 38/509 (7%) Query: 8 LIPFIGGFLCWQTE---RFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQ 64 +IP + F T R K+ + ALI GLTL S +L+ Q S Sbjct: 9 VIPILFAFALPLTSIIVRGNRKIIQAYALIGTGLTLLASYELFRQVYNSSKPLIYTFG-- 66 Query: 65 SEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF--FHLNLMW 122 W GI +D +S L ++T L L + S++ +E +G ++ + Sbjct: 67 -----GWTAPVGIIYE--VDRMSALFALVTAALMFLIAIYSYRYLEHEEGLEWYYTLYLG 119 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 + G++GV L D F F E+ + Y L+ + D I A K+ Sbjct: 120 LEAGLLGVLLTGDAFNLFVMIEVTSIAAYALVMFY----RDRGDSICAGLKYAFIGALGT 175 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFI-------AFAVKM 235 + +A+ L L+ P++ + + + AF +K Sbjct: 176 TMYFLALGTLYGAFGTLNMANLSALIHGLSFPIAGTTYGNIAIASGVALALATWAFLIKA 235 Query: 236 PVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLF--------PNASAEFA 287 +VP H WLP+AH AP+ S L+G+++ Y L+RF ++ + Sbjct: 236 AIVPNHFWLPEAHPAAPSPISAILSGLVVNVGVYSLIRFLYTVYGGEVSGSLGGVIHALS 295 Query: 288 PIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIA 347 I + LG + +GA M AQ D+K+LIAY+++ HMG++ +A+ G+QLA Q A +I Sbjct: 296 VILIVLGAVSALFGALMMNAQRDVKKLIAYSTIMHMGYLAMAVGVGTQLALQAAAFHIIN 355 Query: 348 HGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGE 407 H ++ A LF+ G + +RD+ + GL +M ++ +G+P F + Sbjct: 356 HAIAKALLFLAAGAFIHAVGSRDISDLAGLGRQMPVATFGLAIATLSLVGIPPFNVFFSK 415 Query: 408 FMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFM 467 ++ + P + ++ V A V + + + GK + +E MS + Sbjct: 416 LLLFNAFMEESPALALVLVLSSVIALVAYVRVFQEIWLGKPRENTTIREHGSMSG----V 471 Query: 468 ILLLVVLLVLLGFY-PQPILDTSHSAIGN 495 +L+L V+ +LLG + P I + A+ Sbjct: 472 LLILAVICLLLGLFAPYIIEHYINPAVSQ 500 >UniRef50_A7JYE5 Na(+) H(+) antiporter subunit D n=3 Tax=Vibrio RepID=A7JYE5_VIBSE Length = 498 Score = 267 bits (683), Expect = 7e-70, Method: Composition-based stats. Identities = 118/513 (23%), Positives = 225/513 (43%), Gaps = 26/513 (5%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL +++ + R V W++ + L L ++ L + Q+ Sbjct: 5 LLTLPVVLSLSTALTIFFVRRSTKSV-EWLSGASAILNLVVAGLLTENIISNGIQAVAFG 63 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF--FHLN 119 QWQ+ F I D S+ MV++T ++G + V + ++ + + +H Sbjct: 64 QWQAPF----------GIVFVADYFSVAMVMITAVIGAICVFYAMADLHRKPSYSNYHAL 113 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 +L GV G FL D+F + ++E+ML+ + L+ L KT+I A K+ + Sbjct: 114 THVLLAGVYGAFLTGDIFNLYVWFEVMLIASFGLMVL-----DATKTQIDGAVKYVMLNL 168 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 S LV L+AI L Y ATG + +L F AF++K + P Sbjct: 169 ISTLVFLLAIGLL----YGATGTLNLADLYTKAGESELSINMMLSALFLFAFSIKAALFP 224 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 L WLP ++ P+ A +L K Y L+R +FP A + + P +W+ + + Sbjct: 225 LFAWLPASYHTLPSGVVALFAALLTKVGVYALIRVFTLVFPLAESGWQPTLIWIAGLTML 284 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 G A +Q DIK+++++ +S +G++++ + + LA GA+ ++ H + A LF++ Sbjct: 285 TGVLGAASQFDIKKILSFHIISQIGYMIMGLAIYTPLALAGAIFYIVHHIIVKANLFLIG 344 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP 419 G + + + + +GG++ M WL L L A + G P F G+F+++ S Q Sbjct: 345 GFIERKYGSSQLEHLGGVYKAMPWLAFLFLVPAFSLAGFPPLSGFWGKFLVIKSSLQAEY 404 Query: 420 VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLREL--FMILLLVVLLVL 477 + + +VYS+ + F K + +++ + + L I +L + ++ Sbjct: 405 YWLAGTALLVGLLTVYSMTKIWSEAFWKKPVREKTEQTLQVKVHWLYCVPIAVLTMFTLI 464 Query: 478 LGFYPQPILDTSHSAIGNIQQW--FVNSVTTTR 508 +G +P S A + ++ +V Sbjct: 465 IGLVAEPFYQFSVQAAEQLLNPNEYIRAVLGGN 497 >UniRef50_C1TKY1 Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TKY1_9BACT Length = 487 Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats. Identities = 131/483 (27%), Positives = 213/483 (44%), Gaps = 22/483 (4%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 M W IL+P GFL FG K + ++ +SL + + G L+ + G Sbjct: 1 MSPVWAILVPLCAGFLLPLLSIFGKKAVPAFTVSIGAVSSLVSLSVAMSGWEGLSVTLG- 59 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 W P GIS L +D +S + L + L++ S + F++ Sbjct: 60 ---------GWGPELGIS--LVVDRISGTFLTLGAIGFPLSLAVSTERFGLSPWRFYVIF 108 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 V G+ L D+F F F+E+ V Y +++ + A+ K+ I Sbjct: 109 FLSWASVNGILLTGDLFNLFVFFEIFSVAAYLMVSY----PPRSWRAVEASLKYLILGTV 164 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 L +L+ I + ATG L+ + S ++ F VK VP Sbjct: 165 GALFLLLGIAY----SFMATGQLNMAALSLVLPSVPSATLAVIAGCIFTGLFVKSGTVPT 220 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H WLPDAHS A T+ S L+G+L+K + YG++R S LF +A P+ G + + Sbjct: 221 HFWLPDAHSSAQTSVSALLSGVLVKVSLYGMIRLSYLLFMDAGIGIMPVMTAFGTLSVIL 280 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 G MAF Q D+KRL+AY++V+ +G VL+ I GS L A++ H S GLF++ G Sbjct: 281 GHLMAFQQEDVKRLLAYSTVAQVGTVLVGIGCGSALGISAAILHSFVHMASKMGLFLVSG 340 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 L E TR++ M GL+ L F A + G+P F ++ +L + V Sbjct: 341 VLVEDRGTREIAEMRGLFFHRPLFVLLFCFLAASLAGVPPFSGFFSKWYLLRAISEAGYV 400 Query: 421 I-TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLG 479 + V+ G V ++ Y L + RA+F + + ++ R + + +L + L ++ Sbjct: 401 VPAVVLVGGTVVSAAYYLR-IARAFFSFSDEPPVHRRPHPVTFRAILFLSILCLALAVMP 459 Query: 480 FYP 482 P Sbjct: 460 LIP 462 >UniRef50_Q8R9B0 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit n=2 Tax=Thermoanaerobacteraceae RepID=Q8R9B0_THETN Length = 673 Score = 266 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 111/505 (21%), Positives = 201/505 (39%), Gaps = 47/505 (9%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 L I + +G + R G IA G T L+ + + Sbjct: 7 LFLLSIFLYVVGALISLGLNRDGK-----IANYVSGTTAFLAGCTGVASAVPVLIEGKGF 61 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 + +P+ + +D LS M ++ LL + + S E+Y G + Sbjct: 62 ILEGMEFIPFG-----RFTINVDPLSAFMTLVISLLSIATGVYSISYQEEYIGKGTGVMG 116 Query: 122 W----ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIY 177 + + +I V + + F F FWE+M + YFL+ + + I A +F+ Sbjct: 117 FLNNIFIVSMILVVTSDNAFYFLVFWELMTLVSYFLVCF----EQENREAIKAGFVYFVM 172 Query: 178 TQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPV 237 ++++I+ + TF++ N +S ++ L L F+ F VK + Sbjct: 173 AHVGTVLIMISFILFYVY------TGTFDFAAFRNANLSPVIKNLAFLLAFLGFGVKAGI 226 Query: 238 VPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 VP H WLP AH AP+ S ++G+++KTA YG++R + A+ + + G I Sbjct: 227 VPFHFWLPQAHPAAPSNVSALMSGVMIKTAIYGIIRVGVDFLGAATWWWGLTVLAFGAIS 286 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTG-----------SQLAYQGAVIQMI 346 +G A ++ D+KRL+AY+S+ ++G +L+ + G L + +I Sbjct: 287 AVFGVLYAVSENDLKRLLAYSSIENVGIILMGVGAGMMGIATGYVSVGILGILAGLYHLI 346 Query: 347 AHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVG 406 H + LF+ G + R+HTR+M MGGL M W A++ +P FV Sbjct: 347 NHAVFKGLLFLGAGSVVYRLHTRNMEEMGGLARYMPWTGLTFFIGALSISALPPLNGFVS 406 Query: 407 EFMILFGSFQVV-----------PVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQ 455 ++ F V P+ V S+ + + G + Sbjct: 407 KWFTYHTLFAVSTKGSVLIRMAFPLAAVALALTGALTSLCFVKAYGVTFTGPFRGG-NEL 465 Query: 456 ELPGMSLRELFMILLLVVLLVLLGF 480 ++ + + L + LL + +LG Sbjct: 466 KIKEVPVTMLIGMGLLAIGCFVLGL 490 >UniRef50_Q950M6 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Rhizophydium sp. 136 RepID=Q950M6_9FUNG Length = 510 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 135/418 (32%), Positives = 224/418 (53%), Gaps = 20/418 (4%) Query: 82 AIDGLSLLMVVLTGLLGVLAVLCSWKEIE----------KYQGFFHLNLMWILGGVIGVF 131 +DG+SL M++L ++ + +L +WKEI+ K + ++ + I VF Sbjct: 92 GLDGISLWMILLVNIIIPVTILMAWKEIKLDNNPFNSASKMLKNYIFLILLVNLASIIVF 151 Query: 132 LAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILA 191 D+ LF+ +E +L+PMY LI +G + + A FF+YT L ML+AI+ Sbjct: 152 FVSDILLFYIAFEAILIPMYLLIGFYGSRNKRIEN---AQNTFFLYTLFGSLFMLLAIIT 208 Query: 192 LVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQA 251 + + +Y+ +L P+S+ ++ L LGFFIA A+K P P HGWLP AH ++ Sbjct: 209 IYIQ------TGSTDYQTILTLPISNEIQGFLFLGFFIALAIKTPSFPFHGWLPLAHGES 262 Query: 252 PTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDI 311 T SV LA ILLK A YG+LRF LPLFP AS F P+ + L ++ I Y A + DI Sbjct: 263 STGASVILASILLKLATYGILRFILPLFPYASNYFLPLILTLAILSIIYSCISALSLIDI 322 Query: 312 KRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDM 371 K ++AY+S++H ++ +++ GA I I+HG + GLFI+ G LY R T+++ Sbjct: 323 KSIVAYSSIAHKNVGMMGLFSNDINGITGAFIGSISHGFISGGLFIIIGMLYNRYGTKNI 382 Query: 372 RMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVF 431 GL M F ++ LG P T +F+GE ++ F + + P+IT+ T + Sbjct: 383 NYYRGLVLFMPTFTFFFFIFTLSNLGFPFTMSFIGENLLFFSTINISPLITIFITSVSIL 442 Query: 432 ASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTS 489 +Y + R +GK + + ++++E+ ++L L++L + G +P + +T+ Sbjct: 443 LPIYFIYFYQRISYGKLSPYLLTL-YQDLNIKEINLLLPLILLNTIFGLFPYMVFETT 499 >UniRef50_P12775 NADH-ubiquinone oxidoreductase chain 4 n=29 Tax=Coelomata RepID=NU4M_PARLI Length = 464 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 118/400 (29%), Positives = 189/400 (47%), Gaps = 14/400 (3%) Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEK----YQGFFHL 118 + + + PW +S LA D +S ++ L+ L ++++ S I K Q F + Sbjct: 44 FSNHWSAPW---HNLSNILASDSISAPLIALSCWLAPISLIASNNTISKQSELNQRTFII 100 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 +++I G +I F A+++ LF+ +E L+P LI WG + R A F YT Sbjct: 101 IVIFIAGALIITFSALELLLFYVAFETTLIPTLILITRWGAQME----RFQAGLYFMFYT 156 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 L +LI+++A+ + + N E + + + IAF +KMP+ Sbjct: 157 LFGSLPLLISLIAIYISSSSLSIP---NVELIWTPSETMETLNIWWALSIIAFLIKMPIY 213 Query: 239 PLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 H WLP AH +AP AGS+ LA ILLK YGL+R + + + G Sbjct: 214 GFHLWLPKAHVEAPVAGSMILAAILLKLGGYGLIRLINLFATISLNSLSLALITFCSWGA 273 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFIL 358 + + QTD+K LIAY+SV HM V AI++ + GA+I MIA+GL ++ LF L Sbjct: 274 LVTSIICVRQTDLKALIAYSSVGHMSIVAAAIFSSTNWGTNGALILMIAYGLVSSDLFSL 333 Query: 359 CGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVV 418 +YER TR + + GL + + L + A LG+P + N +GE +IL Sbjct: 334 ANTVYERSGTRTLAITRGLKTILPLSTLWWLVMSAANLGLPPSPNLIGEILILSSLIAWS 393 Query: 419 PVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELP 458 + I +F ++YSL + + G + I + L Sbjct: 394 IWLFPIIGLATIFGAIYSLMIFQLSQQGTPTNNINNISLS 433 >UniRef50_Q9UYP1 Hydrogenase 4, component F or formate hydrogen lyase, subunit 3 n=1 Tax=Pyrococcus abyssi RepID=Q9UYP1_PYRAB Length = 499 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 115/488 (23%), Positives = 221/488 (45%), Gaps = 27/488 (5%) Query: 8 LIPFIGGFLCWQTERF---GVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQ 64 +IP + F K+ + AL+ GLTL + +L + LT S+ +P Sbjct: 9 IIPLVFAFALPLFSVVVGGNRKIIQAYALLGTGLTLISTFKL-----FQLTYSSSLP--I 61 Query: 65 SEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF--FHLNLMW 122 W GI +D LS L+ ++T +L L + S++ +E+ +G ++ + Sbjct: 62 VYTFGKWRAPIGIVYE--VDRLSSLIALVTAVLMFLIAIYSYRYLEREKGLEWYYTLYLG 119 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 + G++GV L D F F E+ + Y L+ + D K + A K+ + Sbjct: 120 LESGLLGVLLTGDAFNLFVMIEVTSIAAYALVMFY----RDRKDSVLAGLKYALIGAVGT 175 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 + +A L + + + + E+L ++ + ++ AF +K + P H Sbjct: 176 TMYFLA-LGVFYGTFGTVNFADLS-EKLHSSGNVVLASSVALVLATWAFLIKATIFPNHF 233 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPI---AMWLGVIGIF 299 WLP+AH AP+ S L+G+++ Y ++RF L+ S + + LG I Sbjct: 234 WLPEAHPAAPSPISAILSGLVVNVGVYAMIRFLYTLYSGLSWIIGWLSFAIIILGAISSI 293 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 +GA M Q D+KRL+AY+++ HMG++L+A+ G+QL Q A+ +I H ++ A LF+ Sbjct: 294 FGALMMNTQRDVKRLVAYSTIMHMGYLLMAVGVGTQLGLQAALFHLINHAIAKALLFLAV 353 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP 419 G +R++ + GL KM ++ +G+P F + ++ + Sbjct: 354 GVFIHVAGSRNIDDLAGLGRKMPITTFSLAIATLSLVGIPPLNVFFSKLLLFNALLEKSF 413 Query: 420 VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLG 479 + ++ V A V + +L+ + GK + + +E S+ + L+L ++ + +G Sbjct: 414 FLALVIAVTSVIALVAYMRVLYTLWLGKPREDLDVKE----SISMSMICLILALICIAIG 469 Query: 480 FYPQPILD 487 +L+ Sbjct: 470 LIAPIVLE 477 >UniRef50_A7XPD6 NADH-ubiquinone oxidoreductase chain 4 n=58 Tax=Metazoa RepID=A7XPD6_9CNID Length = 496 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 171/487 (35%), Positives = 262/487 (53%), Gaps = 18/487 (3%) Query: 8 LIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQG-GYSLTQSAGIPQWQSE 66 LI + T R V + AL L +L W G S Q + +W Sbjct: 21 LIVIMALVNIIGTARERKCVLKKRALEWSLALLFSTLVFWGGFDGESHFQFFSLVEWNIF 80 Query: 67 FDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGG 126 + W P I A+DG+SL+ ++LT L + +L S K I+ F L L ++ Sbjct: 81 STLDWGP-----IVFAVDGVSLVFLLLTTFLIPICILISQKSIKFLFKEFLLCLFFLEFL 135 Query: 127 VIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVML 186 +IGVF+ D+ LF+ F+E +L+PM+FLI +WG + + ++ A+ FF +T L Sbjct: 136 LIGVFIVFDLLLFYLFFEGILIPMFFLIGIWGSR----EEKVRASFYFFFFTFIGSLFFF 191 Query: 187 IAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPD 246 IL L + T +Y LLN + ++ ++G F++FAVK+P++P H WLP Sbjct: 192 FIILFLYQR------IGTTDYFLLLNIKLFLNIQKWALVGVFLSFAVKLPLIPFHIWLPQ 245 Query: 247 AHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAF 306 AH +AP AGSV LAGILLK YGLLRFS PLFP AS ++P+ ++ V+ + YG M Sbjct: 246 AHVEAPVAGSVILAGILLKLGGYGLLRFSWPLFPGASLYWSPVIVFFSVVAVVYGGLMTC 305 Query: 307 AQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERI 366 Q D KRL+AY+SV+HMG V + ++T GA+ M+AHG ++ LFI LY+R Sbjct: 306 RQIDFKRLVAYSSVAHMGLVPLGLFTHVIEGLIGALFLMLAHGFVSSALFIGVTFLYDRH 365 Query: 367 HTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVIST 426 HTR ++ GL M L ++A +G P + NFVGEF L FQ + + Sbjct: 366 HTRLIKYYRGLTLTMPLFVITMLILSLANMGFPLSCNFVGEFFSLLAVFQYHYGVGMFVI 425 Query: 427 FGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPIL 486 G++F+++YSL++ +R FG + + +S RE+F+I ++++ L G P PI+ Sbjct: 426 LGVLFSAIYSLSLFNRISFGGGSNYLLFNR--DLSRREIFVIFPFLLIIFLGGIVPFPII 483 Query: 487 DTSHSAI 493 D +++ Sbjct: 484 DLIKNSL 490 >UniRef50_C8W236 Hydrogenase, membrane subunit n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W236_DESAS Length = 661 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 110/522 (21%), Positives = 206/522 (39%), Gaps = 43/522 (8%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L ++++ ++ G + + K+ W+ + L L G + + Sbjct: 9 LGLMVILLYLSGAILPLLLKTSRKLSLWLG----CFLGGAAGLLGLGLGLASLLAPEPWT 64 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQ----GFFHL 118 +P G+ + +DGLS V L+ L SW + Y+ ++ Sbjct: 65 VNLGTVLP-----GVVFQIVMDGLSGFFVATISLVVALVSFYSWNYMSIYKTENIAWWSF 119 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 + ++ V + +F FWE+M + YFL+ K A + + T Sbjct: 120 CYNVFVLSMLLVVTVTNAIMFLIFWELMTLASYFLVTFEYRHQQVRK----AGFSYIVMT 175 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 + ++ A + + TG W F + + V+ L+ + I F K +V Sbjct: 176 HLGTVFIMTAFFLM----FKGTGGWDFAVLSANSHGLPDAVKSLIFVCALIGFGTKAGIV 231 Query: 239 PLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 PLH WLP AH AP+ S ++G++LKTA YG++R + + A + + + +GV+ Sbjct: 232 PLHIWLPLAHPAAPSNVSAVMSGVMLKTAIYGMIRLIIDILGPGPAWWGGVVLAVGVVSA 291 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTG-----------SQLAYQGAVIQMIA 347 G A + D+KRL+A+ SV ++G +L+ + T + +A + ++ Sbjct: 292 VMGVLYALMEHDMKRLLAFHSVENIGIILMGLGTALIFYAWSMPVAAAVALAAGLFHVLN 351 Query: 348 HGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGE 407 H + + LF+ G +Y H++D+ +GGL KM L L A++ +P F E Sbjct: 352 HAIFKSLLFLGTGSVYYTTHSKDIEELGGLIKKMPQTALLFLVGAISISAIPPFNGFASE 411 Query: 408 FMILFGSFQVVP--------VITVISTFGLVFASVYSLAMLHRAY---FGKAKSQIASQE 456 + I + + V+S L + A +A+ F + Sbjct: 412 YQIYQSLLGMSYQKVSAFWSIAGVLSGVALALTGALAAACFVKAFGISFLALPRTKKAAA 471 Query: 457 LPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQ 498 + + L VL +L G P +L+ I + Sbjct: 472 AEEVPFLMRISMAPLAVLCLLFGVAPGLVLNNITPLIEQLVP 513 >UniRef50_C4LLM4 Na(+)/H(+) antiporter subunit n=3 Tax=Corynebacterium RepID=C4LLM4_CORK4 Length = 999 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 107/499 (21%), Positives = 200/499 (40%), Gaps = 25/499 (5%) Query: 6 LILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQS 65 LI IP F + R + +A ++ L + W+ Sbjct: 3 LIAIPLFVVLALILVPLFVRLLDRNAGWPLALIFIASAIPLLRK--LPDIIDGNPWTWKV 60 Query: 66 EFDMPWIPR-FGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF--FHLNLMW 122 + ++P + L D LS +L +G + S + + +G F+L + Sbjct: 61 TWIEDFLPNGADVIFSLRADALSTFFALLALGIGAAVFIYSTRYLHGGRGSMSFYLLMTA 120 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 + V+ + LA D+ L F WE++ + +FLIA G G + + I T G Sbjct: 121 FMAAVVTLVLADDVILMFISWELVSLASFFLIARSGPGGELG------SMRTIILTFFGG 174 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 L +L ++ V + + E + P + ++ + + K P H Sbjct: 175 LTLLTSLGISAGVTGTTSLSGIIHSPEWAHHP---TLLSVIAVLIATSACTKSAQFPFHF 231 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGA 302 WLP+A + + A ++K Y LLRFS + A + + + +G+ A Sbjct: 232 WLPEAMAADTPVSAFLHAAAVVKAGIYLLLRFSALF--HDDAWWRGLLIIVGMFTAIMAA 289 Query: 303 WMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQL 362 A + D+K+L AY++VS +G+++ I G+ LA AV+ +AH L + LF+L G + Sbjct: 290 LFALQKNDLKKLTAYSTVSQLGWIVCTIGIGTPLAMAAAVVHTLAHALFKSSLFMLIGVV 349 Query: 363 YERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ------ 416 + TRD+R +G +W KM W ++++ A + +P F+ + +L + Sbjct: 350 DHQTGTRDIRRLGPIWRKMPWTFSMAVIAATSMAAVPPLFGFISKEGMLDAMAEGELATP 409 Query: 417 VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLV 476 ++ + +T G + YS + G ++ L + L + Sbjct: 410 ATALLLICATVGAILTFAYS---YRYVFGGFVDGTRDVSDVHEAPLSLWLPAAIPGFLSL 466 Query: 477 LLGFYPQPILDTSHSAIGN 495 LGF P + +A + Sbjct: 467 PLGFVPGFMNSFVDAAADS 485 >UniRef50_B9XHI6 Proton-translocating NADH-quinone oxidoreductase, chain L n=2 Tax=Verrucomicrobia RepID=B9XHI6_9BACT Length = 636 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 104/483 (21%), Positives = 196/483 (40%), Gaps = 21/483 (4%) Query: 5 WLILIPFIGGFLCWQTE--RFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 ++ +P + L + +V I++ + + L+ L+ + L S Sbjct: 12 LILFLPLVSVALISLIPGIKSRPRVSAQISIAAVVVCFLLTSILY----FVLQNSGQQQF 67 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF--FHLNL 120 Q + I I L +D LS++M+++ +G L + SW+ ++ G+ + L Sbjct: 68 PQITATWLQVDYLRIDIGLKLDALSMMMMLIVTGVGGLIHIFSWEYMKGDPGYSRYFACL 127 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + ++G+ +A + + F FWE++ + Y LI W + S A K F+ + Sbjct: 128 SLFIFSMLGIVMADNFLMMFIFWELVGISSYLLIGFWYERPSAAD----ACKKAFLTNRL 183 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 L+ IL + + +T +GV L F A K PL Sbjct: 184 GDFGFLVGILLVWATLGHRLNFDALKQYLDKHTLEFAGVATAAGLLVFCGAAGKSAQFPL 243 Query: 241 HGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 H WLPDA + PT S A ++ Y L R L + + + W+G I Sbjct: 244 HVWLPDAM-EGPTPVSALIHAATMVAAGVYMLCRIYF-LLDVSGSHALEVIAWIGGITAL 301 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 A +A Q DIKR++AY+++S +G++++A+ T A+ + H A LF+ Sbjct: 302 LAAVIAIQQNDIKRILAYSTLSQLGYMVMAVGTHGP---TPAMFHLTTHAFFKALLFLGA 358 Query: 360 GQLYER-IHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVV 418 G + H +++ MG L KM +A G P F + IL + + Sbjct: 359 GAVIHAVHHEQNIWKMGALRKKMPTTFVTFTIGTLALAGCPPLSGFYSKDGILGQAMETH 418 Query: 419 PV-ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVL 477 + ++ + + Y ++ A++G +S+ A+ + +++L V + Sbjct: 419 HYGLFILGLLAAILTTFYMFRLVFVAFYGAPRSE-AADHAHEAPGMLKWPLIILAVFSFI 477 Query: 478 LGF 480 G Sbjct: 478 GGV 480 >UniRef50_B8KBU6 pH adaption potassium efflux system protein n=6 Tax=Proteobacteria RepID=B8KBU6_VIBPA Length = 522 Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats. Identities = 115/501 (22%), Positives = 227/501 (45%), Gaps = 24/501 (4%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L +++ + + +R + I+ + TL ++ L Q+ Q Sbjct: 6 LTLPVVVSLLTAVAIFCAKR-NKALVDAISGTSALATLVIAALLTHDVINGGPQAVAFGQ 64 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF--FHLNL 120 W + F I D L++ MV++T ++GV++V + ++++ + FH + Sbjct: 65 WAAPF----------GIVFVADYLAVAMVMVTAIIGVVSVFYAMGDLQEKASYGTFHALM 114 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 +L GV G FL D+F + ++E+ML+ + L+ L G K ++ A K+ + Sbjct: 115 HVLLAGVYGAFLTGDIFNLYVWFEVMLIASFGLMILDGS-----KQQVDGAVKYVLLNLI 169 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 S LV L+AI L Y A G + S + LL + F AFA+K + P+ Sbjct: 170 STLVFLLAIGLL----YGAAGTLNLADLHAKAALVPSDTKTLLAVLFLFAFAIKAALFPV 225 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 WLP ++ P+A A +L K Y L+R +FP + + + P MW+ + + Sbjct: 226 FAWLPASYHTLPSAVVALFAALLTKVGVYALIRVFTLIFPLSESGWQPTLMWVAGLTMLT 285 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 G A +Q DIK+++++ +S +G++++ + + LA GA+ ++ H + A LF++ G Sbjct: 286 GVLGAASQYDIKKILSFHIISQIGYMIMGLAIYTPLAIAGAIFYIVHHIIVKANLFLIGG 345 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 + + + ++ +GG++ M WL L L A + G P F G+F+++ S Q Sbjct: 346 FIECKYGSGNLGQLGGVYKAMPWLAFLFLIPAFSLAGFPPLSGFWGKFLVIKSSLQTELY 405 Query: 421 ITVISTFGLVFASVYSLAMLHR-AYFGKAKSQIASQELPGMSLREL-FMILLLVVLLVLL 478 + + +V+S+ + ++ K + +Q + + I L L +++ Sbjct: 406 WLAGAALLVGLLTVFSMTKIWNEVFWKKPLQTLKAQPMNKYTKGLYCVPIATLTTLSLII 465 Query: 479 GFYPQPILDTSHSAIGNIQQW 499 G +P + A + + Sbjct: 466 GLAAEPFYQFAELAAEQLIEP 486 >UniRef50_Q9RVZ0 NADH-ubiquinone/plastoquinone subunit, putative n=1 Tax=Deinococcus radiodurans RepID=Q9RVZ0_DEIRA Length = 814 Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats. Identities = 111/492 (22%), Positives = 194/492 (39%), Gaps = 34/492 (6%) Query: 4 PWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQW 63 +L PF+ +C + + A LAL +L+ + Sbjct: 2 TLAVLFPFLMAAVCALLGPQLGRRTGYFAAAGFLPALALIPRLFALPAAAPVS------- 54 Query: 64 QSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIE--KYQGFFHLNLM 121 W+P G+++ DG SLL L G++G LA L S + + G F+ L+ Sbjct: 55 ---EVTRWVPELGLNLVFRGDGFSLLFAALIGVIGTLATLYSVAYLSAGEKFGRFYPYLL 111 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 G ++G+ L+ ++ F FWEM V + LI LW +++ + A Sbjct: 112 CFGGSMLGLVLSDNLVALFGFWEMTSVTSFLLIGLWHTRSAARDGAVKA--------FLI 163 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 + + +LA + A G + +L S L+ AF K +P H Sbjct: 164 SALGGLGLLAAAAMLSIAGGSPNLSQLDLGAVRASPLFVPALLCTLLAAF-TKSAQLPFH 222 Query: 242 GWLPDAHSQAPTAGSVDL-AGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 WLP A +APT S L + ++K + +F L SA ++ I + LG++ + + Sbjct: 223 IWLPTAM-EAPTPISAFLHSATMVKAGVVLVAKFGLIF--GTSALWSGITVPLGLLTMVW 279 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 G+W+A QTD+K L+AY++VS +G ++ A ++ H A LF + G Sbjct: 280 GSWLALRQTDLKALLAYSTVSQLGLLMSLYGLADAGGRFAATAHLLNHAAFKAALFFVVG 339 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 + TR + + L +M ++L A++ G+P G FV + + + P Sbjct: 340 IIDHETGTRQIPYLQNLRRQMPVTFVIALLAALSMAGLPPLGGFVSKELFYENMLRAGPG 399 Query: 421 ITVISTFGLVFASVYSLAMLHRAY---------FGKAKSQIASQELPGMSLRELFMILLL 471 ++ G YS +L + + + + L LL Sbjct: 400 FIAVAVLGSALTLAYSARLLSIFFAPRSGLTPTRRELRQDALKAHVHEAPLGLTLPAGLL 459 Query: 472 VVLLVLLGFYPQ 483 +L G +P Sbjct: 460 AGTALLFGLWPH 471 >UniRef50_Q47T29 NADH dehydrogenase (Quinone) n=4 Tax=Actinomycetales RepID=Q47T29_THEFY Length = 982 Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats. Identities = 120/450 (26%), Positives = 197/450 (43%), Gaps = 23/450 (5%) Query: 40 LALSLQLWLQGGYSLTQSAGIPQWQSE-FDMPWIPRFGISIHLAIDGLSLLMVVLTGLLG 98 AL+L ++L ++ G+ + E F +PW P + +++ +D LSL+M++L +G Sbjct: 28 FALALVPASAAIWALPRAPGVIAGEPELFFLPWAPNYQLALAFRMDALSLVMLLLAAGIG 87 Query: 99 VLAVLCSWKEIEKYQ---GFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIA 155 L +L + + G F L G +IG+ LA D+ + +WE+ V Y LI Sbjct: 88 ALILLYCARYFSDDEPGLGRFAGVLTGFAGAMIGLVLANDLIQLYLYWELTTVFSYLLI- 146 Query: 156 LWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPM 215 GH R AA + T GL ML+ ++ L T+ +L P Sbjct: 147 --GHYPERRDNRRAAAMAINV-TTMGGLTMLVGLVILG------ESAGTYLISGILAEPP 197 Query: 216 SSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDL-AGILLKTAAYGLLRF 274 S + ++ + K + P WLP A QAPT S L A ++K Y + R Sbjct: 198 SGTAVTVALVLILVGALSKSAIFPFSLWLPAAM-QAPTPVSAYLHAAAMVKAGVYLIARL 256 Query: 275 SLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGS 334 + P F + A + A+ LG + W A Q D+K L+A+ +VS +GF+ G+ Sbjct: 257 T-PAFGDIPA-WQYTAVILGTATMIGSGWRALRQHDLKLLLAHGTVSQLGFLTAIFGIGT 314 Query: 335 QLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVA 394 + A + + AH L A LF++ G + TRD+R + GL KM + S+ ++ Sbjct: 315 RDAALAGLAMLCAHALFKAPLFLVVGIIDHSTGTRDLRELSGLRKKMPVVFWTSVVALMS 374 Query: 395 TLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLV----FASVYSLAMLHRAYFGKAKS 450 G+P F + ++ ++ G+V F YSL L A+F K + Sbjct: 375 MAGLPPMAGFAAKEAAFGAFEHADTLLATLALAGVVVGTLFTVGYSLRFLWGAFFDKENT 434 Query: 451 QIASQELPGMSLRELFMILLLVVLLVLLGF 480 P L + ++L L +L GF Sbjct: 435 SPTPLLHPPGPLF-VAPAIVLAALSLLGGF 463 >UniRef50_C5NVG1 Na(+)/H(+) antiporter subunit A n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NVG1_9BACL Length = 788 Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats. Identities = 106/500 (21%), Positives = 202/500 (40%), Gaps = 43/500 (8%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L + +P I F + + + + L L G + Sbjct: 1 MLQLAVFLPVIAMFFVPFFRKNFKTIHTG--------KFVIVVPLILFGYFISNLKYIYS 52 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI---EKYQGFFHL 118 + ++ G+ I+L +DGLSLL +L +G L +L S + ++ F++ Sbjct: 53 GGTIYKKLAFVSNVGLDINLNLDGLSLLFSLLITGIGTLVILYSCYYMSITDEKLHKFYI 112 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 L+ + ++GV L+ +M + FWEM V + LI+ W + K A K I T Sbjct: 113 FLLIFMSAMLGVVLSDNMLSMYMFWEMTSVSSFLLISYWHENDASRK----GALKSLIIT 168 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVE---YLLMLGFFIAFAVKM 235 G++ML I L + +FN E++ + G + M+ K Sbjct: 169 VFGGVLMLAGIFILNNI------TGSFNVSEIIEFTKNHGYNDKYVVAMILIIFGAFTKS 222 Query: 236 PVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGV 295 P H WLPDA + S + ++K Y LLR + + ++ F I + G Sbjct: 223 AQFPFHIWLPDAMAAPTPISSYLHSATMVKAGIYLLLRIGIVF--SFTSSFGNILIIFGT 280 Query: 296 IGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGS-----------QLAYQGAVIQ 344 I + G+ A D+K ++AY+++S +G + + I + A+ Sbjct: 281 ITMLIGSISAIFLKDLKGILAYSTISQLGMMTLMIGIANLGLYNDNHYVYTFAFYAVCFH 340 Query: 345 MIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNF 404 +I H A LF++ G + H+RD+ + G+ M LS+ + G+P F Sbjct: 341 IINHAAFKASLFMITGIIDHSFHSRDIEKLRGIKRYMPLSFILSIIAGFSMAGIPPLSGF 400 Query: 405 VGEFMILFGSF------QVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELP 458 + L + + +I + G + ++YSL + + + GK + I + Sbjct: 401 YSKEYFLTVVYGLTQSSMLYMIIVIAVVIGALGTAIYSLIVAFKPFLGKFDNSILGNKKL 460 Query: 459 GMSLRELFMILLLVVLLVLL 478 + +F+ +++V+ V++ Sbjct: 461 HLPSNGIFISPIILVVFVII 480 >UniRef50_B1ZSE3 NADH dehydrogenase (Quinone) n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZSE3_OPITP Length = 683 Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats. Identities = 116/494 (23%), Positives = 206/494 (41%), Gaps = 38/494 (7%) Query: 25 VKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAID 84 V+ R AL+ G +L + L G P + EF P P ++ + +D Sbjct: 28 VRRERLAALVGFGAPALAALAGLVAALRLLLGGVGAPLPRFEFIPPLFPFL--TLTVRVD 85 Query: 85 GLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIG-----VFLAIDMFLF 139 L +V++ L G+ + S + G ++ ++ L + VF+A D++LF Sbjct: 86 ALGAFFLVVSSLAGLAISIYSIGAAKGLAGRGNVGVLAALFNALLLATALVFMAGDLWLF 145 Query: 140 FFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNA 199 WE+M + Y L++ + + A +FI + +++ +L L + A Sbjct: 146 LGAWELMALTAYGLVSFAHEQPETRR----AGVLYFIMSHLDAACVVLGLLLL----FQA 197 Query: 200 TGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDL 259 +G +F+ + M+ G + F + F +K +VPLH WLP AH AP+ S + Sbjct: 198 SGSTSFDSLHAIGGHMAPGKRDAAFVLFLLGFGIKAGIVPLHIWLPAAHPVAPSNVSAFM 257 Query: 260 AGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTS 319 +G+L+K+ YGL+R S + + +G + G A + D+KRL+AY S Sbjct: 258 SGVLIKSGIYGLIRVSFDFLGTPPGWWGMTVLVIGTVSAVLGVLYALMEHDLKRLLAYHS 317 Query: 320 VSHMGFVLIAIYT-----------GSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHT 368 + ++G +L+ + T + LA + I H LF+ G + HT Sbjct: 318 IENIGIILMGVGTSLLFLHSGHTALATLALIAGLYHTINHATFKGLLFLGAGAVLHATHT 377 Query: 369 RDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ-----------V 417 +M MGGL +M L AVA +P FV E++ Q V Sbjct: 378 HNMEEMGGLAKRMPQTAFCFLIGAVAISALPPLNGFVSEWLTYQSLLQGFDASQSLERLV 437 Query: 418 VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVL 477 +P+ + A+ + + + +S+ A+ + F + +LVV VL Sbjct: 438 LPLSGAMLALTGALAAACFVKAYGVTFLAQPRSEAAAHAQEAGPML-RFGMAVLVVACVL 496 Query: 478 LGFYPQPILDTSHS 491 LG +P ++ Sbjct: 497 LGLFPTTVIRLLDP 510 >UniRef50_B4CV23 Proton-translocating NADH-quinone oxidoreductase, chain M n=2 Tax=Verrucomicrobia RepID=B4CV23_9BACT Length = 489 Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats. Identities = 149/482 (30%), Positives = 238/482 (49%), Gaps = 28/482 (5%) Query: 29 RWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSL 88 R AL + L+L +L + + +Q + P +P + ++ + DGLSL Sbjct: 23 RKTALGAATVQFLLTLFGFL------SYNKAAGGFQFQSITPIVPEWKLNYAVGADGLSL 76 Query: 89 LMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLV 148 +M++LTG++ + AV + K IEK + F+ L++I G G F + D+F F+ F E+ L+ Sbjct: 77 VMLLLTGIVTLAAVWVTPK-IEKRENLFYACLLFISAGAAGAFASTDLFFFYSFHELALI 135 Query: 149 PMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYE 208 P + LI LWG+ R TAA K IY +++LI ++ L A+ TF+ Sbjct: 136 PTFLLIGLWGYG-----ERYTAAWKITIYLGLGSIILLIGLVDLYLAVPAAS--RTFSLI 188 Query: 209 ELL----NTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILL 264 EL N + + + L I F + + + P H W P A+S APT ++ AG+L Sbjct: 189 ELQRLAGNGLIPAAAQSRPYLFLLIGFGILISLFPFHSWAPPAYSSAPTPVAMLHAGVLK 248 Query: 265 KTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMG 324 K YGL+R +LPL P + +A + + L V I Y + AQ + L+ Y+SV HMG Sbjct: 249 KFGLYGLIRIALPLLPEGAKVWASLLLILLVGNIIYIGLVTIAQKKLDLLLGYSSVMHMG 308 Query: 325 FVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWL 384 ++ + I + + GA + M AHGLS A LF L G L +R + GG+ W+ Sbjct: 309 YIFLGIAALNIVGVSGAALLMFAHGLSIAALFALAGFLRQRNPLLLLESFGGVAKSAPWM 368 Query: 385 PALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP--------VITVISTFGLVFASVYS 436 + A A++G+PG NF E + FG+F+ P + TV + +G+V ++VY Sbjct: 369 GFVFGLAAFASIGLPGFANFASEVNVFFGAFKPGPGLVAPNFQLATVFALWGVVISAVYM 428 Query: 437 LAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNI 496 L + G A P SLR + ++LL+ LL++ GF P L +I + Sbjct: 429 LRAYRAIFLGAPGKDSAEYVDPIKSLR--WPVILLLALLLVAGFAPSAFLAYVQPSIQAL 486 Query: 497 QQ 498 Sbjct: 487 LP 488 >UniRef50_B9LT20 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Halorubrum lacusprofundi ATCC 49239 RepID=B9LT20_HALLT Length = 798 Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats. Identities = 112/478 (23%), Positives = 200/478 (41%), Gaps = 40/478 (8%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 ++ + +PF+ L R + + + + L G Sbjct: 7 IVTTAVALPFVAAVLSPLLYRVLGERTGYAGAVVAAASFGLLATEVNSHG---------- 56 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQG--FFHLN 119 W+P + + +DG LL +L +GVL + S + +G ++ Sbjct: 57 ----TVGASWVPALDVGVQFTVDGWGLLFALLASGIGVLVFVYSAAYMHGEEGLARYYAA 112 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 L+ +G ++GV LA D+ F FWE+ + + LI + +D +A + T Sbjct: 113 LLAFMGSILGVALASDLVFIFLFWELTSLCSFVLIGHY----TDDSESRYSARMAMVVTV 168 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMS-------SGVEYLLMLGFFIAFA 232 GL +L +L L A G TF+ ++ + SG+ + A A Sbjct: 169 GGGLCLLAGLLMLAVAARGALGGVTFDLTAMIANDEAMRASLRESGLFVPALGLIVAAAA 228 Query: 233 VKMPVVPLHGWLPDAHSQAPTAGSVDL-AGILLKTAAYGLLRFSLPLFPNASAEFAPIAM 291 K VPLH WLP+A APT S L + ++K Y L R L S E+ + Sbjct: 229 AKSAQVPLHFWLPNAMV-APTPVSAFLHSATMVKVGVYFLGRVRPLLM---SPEWVLVVA 284 Query: 292 WLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLS 351 LG++ + GA +A A TD K L+AY++ SH+G ++ + ++ H L Sbjct: 285 TLGLLTMTVGALLAVAATDTKELLAYSTASHLGLMVAGFGFDIVYGGEAGAFHLLNHALF 344 Query: 352 AAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMIL 411 A LF++ G + TR++ +GGLW ++ A+++ A++ G+P F + ++ Sbjct: 345 KAPLFLVAGIIAHEAGTRNLDNLGGLWRELPVTAAITVVAALSMAGIPPFNGFYSKELLF 404 Query: 412 FGSFQV-------VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSL 462 +++V + ++T V VYS+ L +FG+ ++ A P + L Sbjct: 405 EATYEVAHEAGGIAWLYPTVATLASVLTVVYSVKFLA-LFFGERRAPTADIHRPPIGL 461 >UniRef50_B6YWP6 Hydrogenase 4, subunit 3 n=3 Tax=Thermococcus RepID=B6YWP6_THEON Length = 634 Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats. Identities = 124/505 (24%), Positives = 217/505 (42%), Gaps = 22/505 (4%) Query: 7 ILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSE 66 ++ FI L + + + L+ SL + G L +S + Sbjct: 3 VIFLFIVIILSVASFIGVFSRSAILTKLVNALSALGSLTIAYAGIVGLKESVELNITLLH 62 Query: 67 FDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQG---FFHLNLMWI 123 I ++ L +D LS +++ G+LG + ++ Y+G + N Sbjct: 63 LKSDSIINAFSTLTLKVDPLSGFFMIILGILGFCTSVYGIAYLDMYKGDKRLYAFNYPLF 122 Query: 124 LGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGL 183 L + V ++ ++ F FWE+M + FL+A + + A K+F T+A+ Sbjct: 123 LLFMFLVLVSWNLLWFVVFWELMTLFSQFLVAF-----ERNEKTLIATLKYFCMTKAAAD 177 Query: 184 VMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVE-YLLMLGFFIAFAVKMPVVPLHG 242 MLIAI+ LV + + G + +L+N S +E YL+ GF I VK +VP H Sbjct: 178 FMLIAIV-LVLITISGGGDYDILSSQLVNYFRSHPLEMYLVSAGFMIGLGVKAALVPFHV 236 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGA 302 WLPDA+ +AP+ S L+G + K Y + RF L P + + G + +F+G Sbjct: 237 WLPDAYVEAPSNVSSLLSGAMEKMPVYMMFRFFLSFTP-LTPNIGLLIALFGTLTLFFGT 295 Query: 303 WMAFAQTDIKRLIAYTSVSHMGFVLIAIYTG-----------SQLAYQGAVIQMIAHGLS 351 A QTD KRL+AY SV +G+V+ A+ G LA ++ + H Sbjct: 296 MYALKQTDSKRLLAYHSVGQIGYVVFALGAGIYLLSKGYTTFGALALMASLFHALNHAFF 355 Query: 352 AAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMIL 411 LF+ G + R +RD+ +GGL M +L +++ GMP FV ++MI Sbjct: 356 KGLLFLTAGSILYRTGSRDLDHLGGLARFMPITAFAALIGSLSIAGMPPFNGFVSKWMIY 415 Query: 412 FGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLL 471 + ++++ L ++V + + + + + + + L+L Sbjct: 416 VSTLPTPTLVSLFGALALFISAVTTASFVKYFTSIFVRPPAKEITVKEVPVSMWASQLIL 475 Query: 472 VVLLVLLGFYPQPILDTSHSAIGNI 496 VL V+ G YP L+ A+ ++ Sbjct: 476 AVLCVIFGVYPALPLEAISKAVDSV 500 >UniRef50_Q6GBK7 Putative antiporter subunit mnhA2 n=63 Tax=Staphylococcus RepID=MNHA2_STAAS Length = 800 Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats. Identities = 113/514 (21%), Positives = 215/514 (41%), Gaps = 50/514 (9%) Query: 2 LLPWLILIPFIGGFLCWQTERFG-VKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 L+ LI I I + ++R K +IAL+ ++ Y L Q + Sbjct: 3 LVYLLIAILVIMAMILLMSKRRALAKYAGYIALVAPVISSI----------YFLIQIPSV 52 Query: 61 PQWQS-EFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQ---GFF 116 + Q +PWI I++ L +DGLSL+ ++ L+G+ + + + + F Sbjct: 53 AKLQYLSTSIPWIKTLDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKDNLPRF 112 Query: 117 HLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFI 176 + L + +IG+ L+ + L + FWE+ V + LI+ W + A + F+ Sbjct: 113 YFYLTLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQ----FGAMQSFM 168 Query: 177 YTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMP 236 T GL +L+ + L + + + G+ ++ F + K Sbjct: 169 ITVFGGLALLVGFIMLYIMTGTNNITEILGQADHIKN---HGLFIPMIFMFLLGAFTKSA 225 Query: 237 VVPLHGWLPDAHSQAPTAGSVDL-AGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGV 295 P H WLP A + APT S L + ++K + LLRF+ L S + I ++G+ Sbjct: 226 QFPFHIWLPRAMA-APTPVSAYLHSATMVKAGIFLLLRFTPLL--GLSNMYVYIVTFVGL 282 Query: 296 IGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLA--------------YQGA 341 I + +G+ A Q D+K ++AY+++S +G ++ + G A GA Sbjct: 283 ITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGYAQHQQDAIASIYVFVLFGA 342 Query: 342 VIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGT 401 + ++ H + LF+ G L +RD+R++ G+ + + A++ G+P Sbjct: 343 LFHLMNHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFL 402 Query: 402 GNFVGEFMILFGSFQVVPV----------ITVISTFGLVFASVYSLAMLHRAYFGKAKSQ 451 F+ + M L Q + I + VF Y+L M+ ++ K S+ Sbjct: 403 NGFLSKEMFLDALTQTGQLSQFSLISMIAIVFVGVIASVFTFTYALYMVKEVFWTKYDSK 462 Query: 452 IASQELPGMSLRELFMILLLVVLLVLLGFYPQPI 485 + +++ L+L+VL+ ++ F P Sbjct: 463 VFTKKNIHEPWLFSLPSLILMVLVPVIFFVPNIF 496 >UniRef50_B0VE74 pH adaptation potassium efflux system transmembrane protein n=22 Tax=cellular organisms RepID=B0VE74_ACIBY Length = 949 Score = 263 bits (674), Expect = 9e-69, Method: Composition-based stats. Identities = 113/492 (22%), Positives = 214/492 (43%), Gaps = 30/492 (6%) Query: 13 GGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWI 72 G L +RF V A+ + L L + + W+ Sbjct: 17 GTTLVSLLQRFSRGVTALGAIGVSLTSFGLLLT---------QAKTVLGGASIQQSWDWL 67 Query: 73 PRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI--EKYQGFFHLNLMWILGGVIGV 130 P+ GI++ +D L LL +L +G L + ++ + + +L LM + ++G+ Sbjct: 68 PQLGINLSFRLDALGLLFSLLITGIGTLIYIYAYYYLGPKNSLSKLYLLLMLFMAAMLGI 127 Query: 131 FLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAIL 190 L+ ++ + FWE+ + + L+ W H + + A T GL ML + Sbjct: 128 SLSNNLIILLVFWELTSISSFLLVGYWSHYEAAQRGSRMA----LTITGMGGLAMLGGFV 183 Query: 191 ALVFVHYNATGVWTFN-YEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHS 249 L TG + N + + S + +L + K P H WLP+A + Sbjct: 184 LLG----QITGTYEINDIVGMKDLIQSHYLFVPTLLLILLGAFTKSAQFPFHFWLPNAMA 239 Query: 250 QAPTAGSVDL-AGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQ 308 APT S L + ++K + L R + P+F A+ + I ++G+ + A A + Sbjct: 240 -APTPVSAYLHSATMVKAGIFLLARLA-PIFIGAAL-YHNIVTFVGLFTLCMAACFAIFK 296 Query: 309 TDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHT 368 D+K L+AY+++SH+G ++ + GS LA A+ +I H A LF++ G + T Sbjct: 297 EDLKGLLAYSTISHLGLIVCLLGIGSPLAVAAAIFHIINHATFKAALFMIAGIIDHETGT 356 Query: 369 RDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSF-----QVVPVITV 423 RD+R + G+W + + L++ A + G+P T F+ + M V ++ Sbjct: 357 RDLRKLSGIWQLLPFTATLTMITAASMAGVPLTNGFISKEMFFTELLASLSGSTVIFASI 416 Query: 424 ISTFGLVFASVYSLAMLHRAYF-GKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYP 482 I+T +FA YS+ ++H +F G Q+ ++ + +LL L +L+G +P Sbjct: 417 IATLAGIFAVSYSIRLVHGVFFDGPVGKQVPNKNAHEPPIGMRAPAILLATLCILVGIFP 476 Query: 483 QPILDTSHSAIG 494 +++ +++ Sbjct: 477 ALLVEPLVNSVT 488 >UniRef50_C6A3Z7 Membrane-bound hydrogenase MBH 2, subunit Mbh2H (Hydrogenase subunit) n=2 Tax=Euryarchaeota RepID=C6A3Z7_THESM Length = 517 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 117/514 (22%), Positives = 224/514 (43%), Gaps = 33/514 (6%) Query: 5 WLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQ 64 ++ +P G F+ ++ V W A+ G+++ LSL L + + + Sbjct: 8 LMVALPLFGAFIAPLFKKHHEGVSIW-AIFVTGISVVLSLLLTKEVVTNGIIMYVFGADK 66 Query: 65 SEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF--FHLNLMW 122 +P I I +D + M + L+ + + S+ ++K G ++ LM Sbjct: 67 PTLVLPSGYAVPIRIMFEVDAMGAFMAISATLMSFIGAIYSYSHVKKDTGLEKYYALLML 126 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 + G++G+ L D+F F F E+ + L+ ++ + A K+ I + + Sbjct: 127 LEAGILGMVLTGDLFNLFVFLEIAGIAGSALVGFRNYRGEASE----AGIKYLIVSAVAS 182 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 L++L A+ L + N N + + V+ + + F +FA+K VP+H Sbjct: 183 LMVLFAVSILYGQYGN------LNLAYIAKNVSFNMVDMIALGLLFTSFAMKCGAVPMHY 236 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFA---PIAMWLGVIGIF 299 W+PDA+++ P + L + + Y L R S LF N + A I LGV+ +F Sbjct: 237 WVPDAYTEVPAGINPPLL-VATYASLYALFRVSFTLFANVVIDLARVGWIMSILGVLTMF 295 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQL-------------AYQGAVIQMI 346 G MA Q D+KRL+++ ++S G++L+ + G + A G V +I Sbjct: 296 IGVTMALIQKDVKRLMSHHAISQTGYMLLGVGVGLTVLHDPSKLAEFGRDAMAGGVFHII 355 Query: 347 AHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVG 406 + + + L + G L+ TR++ MGGL KM + A A G+P F Sbjct: 356 NNIIYKSLLLMTAGALFYVTGTRNLNEMGGLARKMPITTISFMVGAAAISGLPPFNGFAS 415 Query: 407 EFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELF 466 +F+I S+++ P++TV + V + + A+ G + ++ + + Sbjct: 416 KFLIYETSYRLNPLLTVFAMVTSVLTLASFVKVFASAFLGPPLEKFENKR--EVPKPMIV 473 Query: 467 MILLLVVLLVLLGFYPQPILD-TSHSAIGNIQQW 499 +L+L L +L G +P +LD + A+ + + Sbjct: 474 AMLILAALCILFGLFPNVVLDKLVYPAVDALINF 507 >UniRef50_C8XH11 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XH11_NAKMY Length = 956 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 111/458 (24%), Positives = 197/458 (43%), Gaps = 24/458 (5%) Query: 34 ITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVL 93 + + L + +W + G W+P ++I L +D L++ + ++ Sbjct: 37 LIVLALLPAATTVWAAAMLPSVMNGGA----LTSSTRWVPALDLAIDLRMDALAMALTLI 92 Query: 94 TGLLGVLAVLCSWKEI---EKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPM 150 +G+L +L S + + + +L+ G ++G+ A ++ L WE+ + Sbjct: 93 IAFIGMLVLLYSARYFPADDDGLSKYSGSLVAFAGAMLGLVWANNLILLVVCWELTGILS 152 Query: 151 YFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEEL 210 Y LIA + K+ TAA++ + T A GLVMLI + L T TF E+ Sbjct: 153 YLLIA----HRAGKKSSRTAASQALMVTTAGGLVMLIGAVMLG------TLAGTFTISEI 202 Query: 211 LNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYG 270 L P S + + +L + K +VP WLP A + A + A ++K Y Sbjct: 203 LAAPPSGPLVTVSVLLLIVGGISKSAIVPFQFWLPGAMAAPTPASAYLHAATMVKAGIYL 262 Query: 271 LLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAI 330 LR + + P+ + LG + +GA +A Q D+K L+AY +VS +G + + I Sbjct: 263 FLRLAPAF--ATLPVWQPVLIALGGGTMLFGAVLALRQRDLKLLLAYGTVSQLGLMTLVI 320 Query: 331 YTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLF 390 TG+ A G + +IAH A LF G + TRD+ + GL +M L L++ Sbjct: 321 GTGNPDALLGGLAMLIAHATFKAPLFFTVGIIDTTTGTRDLTKLSGLGRRMPLLATLAVL 380 Query: 391 FAVATLGMPGTGNFVGEFMILFGSFQ---VVPVITVISTFGLVFASVYSLAMLHRAYFGK 447 A++ G+P F + G + V V+ G + YS + A+ Sbjct: 381 SALSMAGIPPMLGFAAKEADYAGLLEGGTGGYVAVVVMALGSAITTAYSARFIWGAF--A 438 Query: 448 AKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPI 485 AK + + + S + + +V + ++LG P + Sbjct: 439 AKKDVPAADPAPTSAFMVGPTMAMVAIGLVLGIAPGLL 476 >UniRef50_B1ZSD9 NADH dehydrogenase (Quinone) n=2 Tax=Bacteria RepID=B1ZSD9_OPITP Length = 662 Score = 261 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 115/459 (25%), Positives = 176/459 (38%), Gaps = 43/459 (9%) Query: 76 GISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIE-----KYQGFFHLNLMWILGGVIGV 130 G ++H+ +D +S +VL ++G A + S + + +L + V Sbjct: 63 GENLHVRLDAVSAFFLVLLAVVGGAASVYSREYWSDRAHPRSARSGRAWWTLLLATMGAV 122 Query: 131 FLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAIL 190 +A + F WE+ V YFLI + + A +F + A L + Sbjct: 123 LVAANGLHFLIAWELFAVSGYFLIT----RERQRREVRAAGWLYFAASHAGTLCL----F 174 Query: 191 ALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQ 250 + TG W + L + F VK + PLH WLP AH+ Sbjct: 175 GFFTLLAARTGSWDLGAMQDRRELAP------LFWLALVGFGVKAGLFPLHIWLPSAHAN 228 Query: 251 APTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTD 310 AP+ S L+G+ LK YGL+RFS L + LGV G A Q D Sbjct: 229 APSHVSAILSGVALKMGIYGLVRFSGWL--PVPVAAGWVIALLGVASAVLGVAFALGQHD 286 Query: 311 IKRLIAYTSVSHMGFVLIAIY-----------TGSQLAYQGAVIQMIAHGLSAAGLFILC 359 +KRL+AY SV ++G +LI + +LA G ++ + HGL A LF+ Sbjct: 287 LKRLLAYHSVENIGIILIGLGFALVATANGEPAWGRLALAGGLLHIWNHGLFKALLFLGA 346 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVV- 418 G + TR+M +GGLW M W AVA G+P FV E+++ G F Sbjct: 347 GSVLHATGTREMSRLGGLWRTMPWTAGCFTLGAVAISGLPPLNGFVSEWLVFLGLFDAAG 406 Query: 419 -----PVITVISTFGLVFASVYSLAMLHR----AYFGKAKSQIASQELPGMSLRELFMIL 469 V + L +LA + + G +S +A + +L Sbjct: 407 AGGLPAWAAVPAAILLGMTGALALACFAKVCGVVFLGLPRSAVA-EHAHESGPLMRGPML 465 Query: 470 LLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNSVTTTR 508 LL V +G P AI + + +V Sbjct: 466 LLAACCVAIGLAPVFFWPALAHAIDAWRPAWSGAVALAN 504 >UniRef50_B6YWQ6 Hydrogenase 4, subunit 3 n=2 Tax=Thermococcus RepID=B6YWQ6_THEON Length = 520 Score = 261 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 114/508 (22%), Positives = 212/508 (41%), Gaps = 37/508 (7%) Query: 8 LIPFIGGFLCWQTE---RFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQ 64 +IP I F + K+ + LI GL L + +L+ ++ + Sbjct: 9 VIPVIFAFALPLFSIIIKGNRKIIQAYVLIGTGLALVSTFKLF-------QKTYASDRPL 61 Query: 65 SEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF--FHLNLMW 122 W G+ +D LS L+ ++T L L + S++ +E G ++ + Sbjct: 62 VYTFGGWSAPVGVIYE--VDKLSALIALVTAGLMFLISIYSYRYLEHENGLEWYYTLYLG 119 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 + G++GV L D F F E+ + Y L+ + D + A K+ + Sbjct: 120 LEAGLLGVLLTGDAFNLFVMIEVTSIAAYALVMFY----RDRGDSVYAGLKYALIGAVGT 175 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSG-------VEYLLMLGFFIAFAVKM 235 + +A+ L ++ P++ + + AF +K Sbjct: 176 TMYFLALGILYGAFGTVNLADLTAKVHGMDFPLTGAPVGDIVVASGVALALATWAFLIKA 235 Query: 236 PVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNA--------SAEFA 287 +VP H WLP+AH AP+ S L+G+++ Y L+RF ++ + + Sbjct: 236 AIVPNHFWLPEAHPAAPSPISAILSGLVVNVGVYSLIRFLYTVYGGTLIPELARIVSVLS 295 Query: 288 PIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIA 347 I + LG + +GA M Q D+KRLIAY+++ HMG++ +A+ G+QL Q A+ ++ Sbjct: 296 NIVVVLGAVSSLFGAAMMTVQKDVKRLIAYSTIMHMGYLFMAVGLGTQLGLQAALFHLVN 355 Query: 348 HGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGE 407 H ++ A LF+ G I +R++ + GL KM ++ +G+P F + Sbjct: 356 HAIAKALLFLAAGAFIHAIGSRNVDDLAGLGKKMPVATFSLAIATLSLVGVPPLNVFFSK 415 Query: 408 FMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFM 467 ++ + +I V A V + + H + GK + I +E MSL + Sbjct: 416 LLLFNALMEKGLGPALILVISSVIALVAYVRVFHIIWLGKPRKDIKIKEHASMSL----V 471 Query: 468 ILLLVVLLVLLGFYPQPILDTSHSAIGN 495 L+L V+ +++G I+D + Sbjct: 472 CLVLAVICIIVGLATPIIVDGLINPAAT 499 >UniRef50_D2S7T6 NADH dehydrogenase (Quinone) n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S7T6_9ACTO Length = 948 Score = 261 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 104/450 (23%), Positives = 187/450 (41%), Gaps = 35/450 (7%) Query: 18 WQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGI 77 R G +A G+ L+ + W+P + Sbjct: 19 LLYRRLGRDTGYLLAAGFAGVGGLLATGAPTVLDGGAVTA----------SWTWLPSLQV 68 Query: 78 SIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI--EKYQGFFHLNLMWILGGVIGVFLAID 135 S L +DGL+ L ++ +GVL + S + + G + L G ++G+ LA D Sbjct: 69 SFALRLDGLAGLFCLIVLGVGVLIMAYSPRYMGDSSRNGVVYGLLTLFAGAMLGLVLAAD 128 Query: 136 MFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFV 195 + L + FWE+ V + LI G A R + T A GL +L+A++ L V Sbjct: 129 VVLLYVFWELTTVCSFVLIGTAGQVAVKPGRRA------LLITAAGGLALLLAVIMLSVV 182 Query: 196 HYNATGVWTFNYEELLN---TPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAP 252 V T + +L ++S + + + A K +PLH WLP A Sbjct: 183 ------VGTTDLATILAERDQVLASPLAWPIGALIATAAFTKSAQLPLHFWLPGAMVAMT 236 Query: 253 TAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIK 312 + A ++K Y L+R + PLF + A ++ + + +G+ GA+MA + D+K Sbjct: 237 PVSAYLHAATMVKAGIYLLMR-TTPLFADQPA-WSALLITVGLASAVAGAFMALREHDLK 294 Query: 313 RLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMR 372 ++A+++VS +G ++ I G+ +A A++ AH L A LF+L G + + +RD+R Sbjct: 295 AILAHSTVSQLGLLIAVIGVGTPVALAAAMLHTFAHALFKATLFMLVGIIDKETGSRDIR 354 Query: 373 MMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ------VVPVITVIST 426 + GL M ++ A++ G+P FV + + G Q V + Sbjct: 355 ELSGLRRVMPVTATVTGLAALSMAGVPPMLGFVSKEYLFQGLLQADFAPWAGAVAGALGV 414 Query: 427 FGLVFASVYSLAMLHRAYFGKAKSQIASQE 456 Y + +++ A+ G + + Sbjct: 415 TASALTFAYGMRIVYGAFGGPTRQPDLYEP 444 >UniRef50_P03905 NADH-ubiquinone oxidoreductase chain 4 n=7832 Tax=Coelomata RepID=NU4M_HUMAN Length = 459 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 120/380 (31%), Positives = 192/380 (50%), Gaps = 12/380 (3%) Query: 112 YQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAA 171 + + L+ + +I F A ++ +F+ F+E L+P +I WG++ R+ A Sbjct: 91 RKKLYLSMLISLQISLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPE----RLNAG 146 Query: 172 TKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMS-SGVEYLLMLGFFIA 230 T F YT L +LIA++ +N G L +S S L+ L + +A Sbjct: 147 TYFLFYTLVGSLPLLIALIY----THNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMA 202 Query: 231 FAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIA 290 F VKMP+ LH WLP AH +AP AGS+ LA +LLK YG++R +L L P P Sbjct: 203 FMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFL 262 Query: 291 MWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGL 350 L + G+ + + QTD+K LIAY+S+SHM V+ AI + ++ GAVI MIAHGL Sbjct: 263 -VLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGL 321 Query: 351 SAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMI 410 +++ LF L YER H+R M + GL + + + L ++A L +P T N +GE + Sbjct: 322 TSSLLFCLANSNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSV 381 Query: 411 LFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILL 470 L +F + +++ ++ ++YSL M +G I + + RE ++ + Sbjct: 382 LVTTFSWSNITLLLTGLNMLVTALYSLYMFTTTQWGSLTHHINNMKPSF--TRENTLMFM 439 Query: 471 LVVLLVLLGFYPQPILDTSH 490 + ++LL P I S Sbjct: 440 HLSPILLLSLNPDIITGFSS 459 >UniRef50_Q34949 NADH-ubiquinone oxidoreductase chain 4 n=5 Tax=Lumbricina RepID=NU4M_LUMTE Length = 452 Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats. Identities = 121/408 (29%), Positives = 197/408 (48%), Gaps = 13/408 (3%) Query: 84 DGLSLLMVVLTGLLGVLAVLCSWK--EIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFF 141 D +S + LT + V+ +L S K + Y F NL+ +L +I FL+ ++ +F+ Sbjct: 56 DMMSFTLSALTIWVTVMMILASTKIMHLNMYPKMFMTNLVILLIILINCFLSPNLIMFYI 115 Query: 142 FWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATG 201 ++E L+P LI WG++ R A+ IYT A+ L ML+ + + V A Sbjct: 116 WFEASLIPTMVLIMTWGYQPE----RSQASMYLMIYTVAASLPMLMVLCKIFIVSKTAMM 171 Query: 202 VWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAG 261 N E PM L + F VK+P+ +H WLP AH +AP AGS+ LA Sbjct: 172 PMFMNMEF----PMDYPSMALAWVLTLGGFLVKLPMFTVHLWLPKAHVEAPIAGSMILAA 227 Query: 262 ILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVS 321 ILLK YG+LR L LF + + + + ++G + + Q+D+K LIAY+SV Sbjct: 228 ILLKLGGYGILRM-LSLFHYMAKSTSSLLSSVALVGAVSTSLICLRQSDLKSLIAYSSVG 286 Query: 322 HMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKM 381 HMG ++ S +Q A+ MIAHGLS++ LF++ YE HTR + +M GL Sbjct: 287 HMGLMVAGALMSSNWGFQAALAMMIAHGLSSSALFVMANMNYELTHTRSLFLMKGLLVLA 346 Query: 382 KWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLH 441 L F + + P + N + E M++ ++ ++ F + Y L M Sbjct: 347 PTLTMWWFLFTASNMAAPPSINLLSEIMLITSILKMSTSAFILLGLTSFFTAAYCLYMYT 406 Query: 442 RAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTS 489 + G + S +P +++L ++ + +V +L+ F P+ I S Sbjct: 407 SMHHGPL--MLTSNPIPQFKVKDLTLMTMHLVPTILIIFKPELITSWS 452 >UniRef50_B1VI36 pH adaptation potassium efflux system transmembrane protein n=5 Tax=Actinomycetales RepID=B1VI36_CORU7 Length = 1123 Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats. Identities = 107/427 (25%), Positives = 189/427 (44%), Gaps = 19/427 (4%) Query: 76 GISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF--FHLNLMWILGGVIGVFLA 133 I+ L +D LSL +L L+G + + S + + + F+L + + V+ + LA Sbjct: 78 DITFGLTMDALSLFFTLLALLIGAVVFIYSTRYLHPGEKILSFYLLMTAFMLAVLLLVLA 137 Query: 134 IDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALV 193 D+ L F WE++ + +FLIA G G TR I T GL ++ A+ +V Sbjct: 138 SDVALLFIGWELVSLASFFLIARSGSSGEAGATRT------LILTFVGGLFLIAALGIMV 191 Query: 194 FVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPT 253 V + N + +GV +L+ +A K +P H WLP+A + Sbjct: 192 GVTGSTQLADILADPSWGNNTVLTGVTAMLIA---MAGFSKAAQIPFHFWLPEAMAADTP 248 Query: 254 AGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKR 313 + A ++K Y LLRFS + + + + G++ A A +TD+K+ Sbjct: 249 VSAFLHAAAVVKAGVYLLLRFSGIF--AGTVIWHYVLIITGMVTALMAALYAMQKTDLKK 306 Query: 314 LIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRM 373 L AY++VS +G+++ I G+ A A++ AH L + LF+L G + + +RD R Sbjct: 307 LTAYSTVSQLGWIVATIGVGTPFAITAAIVHTAAHALFKSSLFMLVGVVDHQAGSRDTRR 366 Query: 374 MGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV------VPVITVISTF 427 +G LW +M + ++ A + +P T FV + +L + V V+ ++ Sbjct: 367 LGSLWRRMPFTFWSAVVAAGSMAAIPPTLGFVSKEGMLTAFQEAPFSQAGVWVLLAVAGV 426 Query: 428 GLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILD 487 G + +YS + A+ + ++E P + LL + V +P+ LD Sbjct: 427 GALATFMYSARYVFGAFVDGKTDESETREAPVSLWLPAALPGLLSLPAVFFLAWPESWLD 486 Query: 488 TSHSAIG 494 A G Sbjct: 487 NIALATG 493 >UniRef50_A7H5R9 NADH-quinone oxidoreductase, M subunit n=15 Tax=Campylobacter RepID=A7H5R9_CAMJD Length = 495 Score = 260 bits (666), Expect = 7e-68, Method: Composition-based stats. Identities = 142/501 (28%), Positives = 260/501 (51%), Gaps = 30/501 (5%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L +LI P I F+ R + +++ + LAL+L ++ + + Sbjct: 1 MLNYLIFFPLISAFVVLLLNRG---GVKVFSVVVSFMILALNLDIFADFLQGTSFDYNLS 57 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 +F S H+ +D ++L++++L+ L+ L+ L ++ Q + Sbjct: 58 FKILKF---------FSFHVGVDSIALILMLLSSLMIFLSFLF----LKLEQKALVSCIF 104 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 ++ ++G+F A D LF+ FWE L+P+ +++ ++G +G KFFIY A Sbjct: 105 FLEFAIMGLFSAKDGLLFYVFWEFSLLPLLYIMGVYGKDFREG-------VKFFIYAFAG 157 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLN--TPMSSGVEYLLMLGFFIAFAVKMPVVP 239 ++ML+A++ +++Y ++TF+ E N + ++ + LL FFIAFA+K P+ P Sbjct: 158 SILMLVALIYQAYLNYQLLNIFTFDLEIWKNNTSAVNFTEQLLLFGAFFIAFAIKAPLFP 217 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 LH W P ++ +P SV L ++ K A +G L F LPLFP+AS F P+ + L ++ I Sbjct: 218 LHTWAPKVYANSPVLVSVML--VVFKMAPFGFLLFCLPLFPDASVYFMPLIVALCIVSIV 275 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 Y A +A+ +IK LIAY+S+SH+G +++ I++ + L GAV M AHG+ LF++ Sbjct: 276 YNALIAYKAENIKELIAYSSISHLGVMILGIFSLNALGISGAVFYMFAHGIVTGALFLMV 335 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP 419 LY+R HT D+ L K + +A++ +P T +FVGEF+IL G ++ Sbjct: 336 ELLYQRYHTYDISFYHSLAKKAPLFSIFFMLILLASVSLPLTVSFVGEFLILLGIAKINL 395 Query: 420 VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLG 479 +++ ++ ++Y A+ + F + +S I S + LRE+ ++ +VV++ LG Sbjct: 396 FYALLAGLVIILGAIYIFAVFRKISFMQKQSFIESFS---LRLREIVALVCIVVMIFGLG 452 Query: 480 FYPQPILDTSHSAIGNIQQWF 500 P +L + N+ + Sbjct: 453 LMPNILLKPIQKDVDNLIKTM 473 >UniRef50_C1YJ06 NADH:ubiquinone oxidoreductase subunit 5 (Chain L)/multisubunit Na+/H+ antiporter, MnhA subunit n=4 Tax=Actinomycetales RepID=C1YJ06_NOCDA Length = 968 Score = 260 bits (666), Expect = 7e-68, Method: Composition-based stats. Identities = 104/429 (24%), Positives = 188/429 (43%), Gaps = 23/429 (5%) Query: 40 LALSLQLWLQGGYSLTQSAGIPQWQS-EFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLG 98 LAL++ + ++L Q I + ++ +PW P F + + L +D L L+M ++ +G Sbjct: 10 LALAVVPGVSTLWALFQIPAIMRGETLAVSIPWAPEFSLRLGLYMDALGLVMTLIAAGVG 69 Query: 99 VLAVLCSWKEIEKYQ---GFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIA 155 L ++ + + + F + G ++G+ LA D+ F +WE+ V Y LI Sbjct: 70 ALILIYCARYFDDSEPGLARFAGVFVAFAGAMLGLVLADDLIQLFVYWELTTVFSYLLIG 129 Query: 156 LWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPM 215 +++ K AA T GL ML+ ++ L T+ E++ +P Sbjct: 130 ----HSTELKESRRAAMTALTVTTFGGLAMLVGMIMLGET------AGTYVISEIVASPP 179 Query: 216 SSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGS-VDLAGILLKTAAYGLLRF 274 + + + ++ + K ++P WLP A +APT S A ++K Y + R Sbjct: 180 AGALVNVALVLIMVGAMSKSALLPFSLWLPAAM-RAPTPVSGYLHAAAMVKAGVYLVARL 238 Query: 275 SLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGS 334 + + A + A++ G + + W A Q D+K ++AY ++S +GF++ + G+ Sbjct: 239 TPAF--HDVAVWKYTALFFGTLTMVLAGWKALRQYDLKLVLAYGTISQLGFLITLLGAGT 296 Query: 335 QLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVA 394 Q + +IAH L A LF++ G + TRD+R + GL S M S+ + Sbjct: 297 QAGALAGISMLIAHSLFKAPLFLVVGVIDHSTGTRDLRELSGLRSSMPVTFWTSVVALAS 356 Query: 395 TLGMPGTGNFVGEFMILFGSFQ----VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKS 450 G+P T F + + G+F+ + G F YSL L A++ K Sbjct: 357 MAGLPPTLGFAAKELAF-GAFEHGGGADIAVLAGIVIGSTFTVAYSLRFLWGAFWDKENV 415 Query: 451 QIASQELPG 459 PG Sbjct: 416 PATPLHAPG 424 >UniRef50_Q3AB32 Carbon monoxide-induced hydrogenase, membrane anchor subunit n=2 Tax=Clostridia RepID=Q3AB32_CARHZ Length = 1274 Score = 260 bits (666), Expect = 8e-68, Method: Composition-based stats. Identities = 127/516 (24%), Positives = 222/516 (43%), Gaps = 60/516 (11%) Query: 6 LILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQS 65 L+L+P++GGF+ + F + +A+ G T+ L+ WL G + Sbjct: 241 LVLVPYVGGFIVYLAGCFSQALRNILAVGITGTTVYLT---WLAGNF------------- 284 Query: 66 EFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIE--KYQGFFHLNLMWI 123 D LS +L +G L L S + Y + L+ + Sbjct: 285 ------------------DSLSKFFALLMAFIGFLVTLYSVGYFKAKPYANRYFFFLLLM 326 Query: 124 LGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGL 183 LG ++G+ + ++ F+ FWE+M YFL+ + + A K+FI + Sbjct: 327 LGTLLGLTTSKELGNFYVFWELMTWTSYFLVI-----QEQTQKALRAGFKYFIMCTSGAY 381 Query: 184 VMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGW 243 +ML+AIL L G +S G+ +++ F I F VK +VPLH W Sbjct: 382 IMLLAILTLHV----KLGSLDLTTISANLQVLSPGLMLVVLGMFIIGFGVKAGLVPLHSW 437 Query: 244 LPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFP----------NASAEFAPIAMWL 293 LPDAH AP++ S ++GIL KT YGL+R +F + I L Sbjct: 438 LPDAHPVAPSSISAPMSGILTKTGIYGLVRILFVVFGVSLLTKVGTTGQFSTIGFIISLL 497 Query: 294 GVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAA 353 G + YG MA QTD+K+++AY++++ +G ++I + G+ L++ GA+ ++ H + Sbjct: 498 GAFTLLYGEIMALLQTDVKKMLAYSTMAQVGEIVITLGVGTYLSFIGALYHILNHAIMKN 557 Query: 354 GLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFG 413 LF+ G L R+ ++++ + G+ M +A +G+P F+ +F++L+ Sbjct: 558 LLFLAVGALILRVKSQEINKLKGIGRVMPVTSLCFSIGILAIMGLPPFNGFISKFLMLYA 617 Query: 414 SFQV-VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLV 472 Q + + G + Y L ++ +F K + + + L I++L Sbjct: 618 LVQSGHLALAGLILLGSILGGFYYLKVVRIIFFEKYEGPARQE----APITMLIPIVILT 673 Query: 473 VLLVLLGFYPQPILDTSHSAIGNIQQWFVNSVTTTR 508 L + G YPQ L I +VT Sbjct: 674 GLSIFNGVYPQAGLALIKPVADLIAANGHMAVTAIP 709 Score = 201 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 119/504 (23%), Positives = 209/504 (41%), Gaps = 62/504 (12%) Query: 4 PWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQW 63 P + LIP +G + R VKV W+A+ TM TLA Sbjct: 716 PIVTLIPMVGALFAYFFGRRSVKVSGWLAVATMVATLATVFAA----------------- 758 Query: 64 QSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKY--QGFFHLNLM 121 +D S L +GVL +L S +E Q F+L Sbjct: 759 ----------------STGLDIFSRSFAFLIAFIGVLNLLYSLGYMEHEHAQNRFYLFFT 802 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMML-VPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 ++GG++GV ++ D+F FF FWE+M +YF+I + + K+FI+ Sbjct: 803 LMIGGLLGVAVSKDLFNFFAFWEIMSSWTLYFVII-----HEETSEALREGFKYFIFNYV 857 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLN--TPMSSGVEYLLMLGFFIAFAVKMPVV 238 A L L+ + TF EL + + +G+ L ++ I FA+K ++ Sbjct: 858 G------ANLLLLGLLVLTVNAGTFEMSELAGRLSALPTGLVALGLILMLIGFAMKAAML 911 Query: 239 PLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNA----------SAEFAP 288 P APT S ++ +LLK+A +G+++ A Sbjct: 912 PFRIDYQMHPPTAPTPVSGYISSVLLKSAPFGMVKLFYVFGGVALLSKLGQLGDMPSLMY 971 Query: 289 IAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAH 348 I W+ + I A +A Q+ +KRL+ Y +VS MG++++ I GS L G ++ ++ H Sbjct: 972 ILAWVSGLTILMAAALALLQSGMKRLLIYHTVSQMGYIILGISLGSSLGLAGGLLHLVNH 1031 Query: 349 GLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEF 408 L LF++ G + + D+ +GG+ KM ++ + G+P F ++ Sbjct: 1032 MLFKNLLFLVAGAIMVKTGIGDLDRLGGIGRKMPVTLSVFAIGTFSIAGIPPFNGFTSKW 1091 Query: 409 MILFGSFQVVPVITVISTFGLVFASVYS-LAMLHRAYFGKAKSQIASQELPGMSLRELFM 467 +I S + V + + ++ S L LH A+FG+ ++ + + Sbjct: 1092 LIYEASMEKGYVFLALLSLLASVLTLASFLKFLHSAFFGQIPKEL--ENVTEAPWTMQIP 1149 Query: 468 ILLLVVLLVLLGFYPQPILDTSHS 491 +++L VL ++ G +P L T + Sbjct: 1150 MVILAVLCMVFGIFPGIPLATIAA 1173 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 43/212 (20%), Positives = 98/212 (46%), Gaps = 3/212 (1%) Query: 288 PIAMWLGVIGIFYGAWMAFAQ-TDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMI 346 + GV+ + G +A + ++ + + +S++ +GFVL+ + TG+ + GA++ + Sbjct: 11 SLQALFGVMLLLVGELVALLRWKNLIQFLIISSIAEIGFVLLGLGTGTYVGTSGALLHLE 70 Query: 347 AHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVG 406 + +F+ R H+ + + G+ KM L F + +G+ + Sbjct: 71 YQIVMRGLVFLAAAAFIFRGHSASVEKLQGIGRKMPVTTTLFGFGLFSVMGLSPFKGSIS 130 Query: 407 EFMILFGSFQVVPVI-TVISTFGLVFASVYSLAMLHRAYF-GKAKSQIASQELPGMSLRE 464 +F+I++ + + + I+TFG + +VY L + F + ++E+ S Sbjct: 131 KFLIIYAAIESGHWLSAAIATFGSIIEAVYFLQVFQILCFEDPVQEGPGAEEVRETSPGL 190 Query: 465 LFMILLLVVLLVLLGFYPQPILDTSHSAIGNI 496 + ++L+L VL L+G P+P + + A + Sbjct: 191 MAVLLVLGVLTALMGLIPEPFIHGAERAAAVL 222 >UniRef50_B8DNI8 NADH dehydrogenase (Quinone) n=4 Tax=Desulfovibrio vulgaris RepID=B8DNI8_DESVM Length = 1264 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 112/429 (26%), Positives = 189/429 (44%), Gaps = 27/429 (6%) Query: 83 IDGLSLLMVVLTGLLGVLAVLCSWKEI--EKYQGFFHLNLMWILGGVIGVFLAIDMFLFF 140 ID LS L V+ +G++ + S I ++ G + L+ + G + G+ LA D F+ Sbjct: 278 IDPLSRLFGVIIAGIGLVVAVYSTGYIHHDRRAGGYWFFLLLMCGSLSGLALARDFGGFY 337 Query: 141 FFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNAT 200 FWE+M YFL+A AA K+F+ A ML + L Sbjct: 338 VFWELMTFSSYFLVA-----HEATDKAFHAAVKYFVMCVAGACAMLPGFMLL----SAQA 388 Query: 201 GVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLA 260 G F L + + V ++ F+ FAVK +VP HGWLPDAH AP++ S L+ Sbjct: 389 GTLDFAALAGLAATLPAPVVKGAVVLAFVGFAVKAGLVPGHGWLPDAHPAAPSSISGPLS 448 Query: 261 GILLKTAAYGLLRFSLPLFPNA-----------SAEFAPIAMWLGVIGIFYGAWMAFAQT 309 GIL KT YG +R L +F +A + + LG + YG MA Q Sbjct: 449 GILTKTGVYGTVRLMLAVFGSAVLLKAGESAGGFSSMGLLVTALGTATMLYGELMALKQD 508 Query: 310 DIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTR 369 D+KRL+AY+++ +G + + I G+ LA G+++ ++ H + LF+ G L R ++ Sbjct: 509 DLKRLLAYSTMGQVGEIFMVIGLGTWLATTGSLLHVLNHAIMKNLLFLCAGGLILRAGSK 568 Query: 370 DMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV-VPVITVISTFG 428 + + G+ M + + ++ +G+P FVG++++L P + + G Sbjct: 569 KLADLAGMARVMPFTAGCMVVGLISIMGLPPFNGFVGKYLMLQALVAAGHPAVAAVLLLG 628 Query: 429 LVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDT 488 + VY + ++ F + + + +L L ++LG PQ L Sbjct: 629 SLAGCVYYMRIVRTLVFQPYTGPMVQE----APVSMRVATGVLAALCLVLGVLPQLGLSL 684 Query: 489 SHSAIGNIQ 497 + Sbjct: 685 VTPVADMLA 693 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 88/419 (21%), Positives = 183/419 (43%), Gaps = 25/419 (5%) Query: 82 AIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQG--FFHLNLMWILGGVIGVFLAIDMFLF 139 +D +S ++ ++G L + + +E F+ ++++GG++GV + D+F F Sbjct: 755 GLDSISFAFALVVPVIGCLNMFYAVGYMEHSHTQWRFYTFFLFMVGGLMGVAASNDLFGF 814 Query: 140 FFFWEMML-VPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYN 198 F FWE+M +YF+I + + K+F + + + ++ L + Sbjct: 815 FTFWEIMSSWSLYFVIV-----HEENPAALREGFKYFFFNVLGAAFLFLGVVML----SS 865 Query: 199 ATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVD 258 G +F M + + I F +K +P + + APT S Sbjct: 866 MAGDPSFGAVRSALPTMPVALAATAVALMAIGFTMKAAQLPFRIDVQMHPATAPTPVSGY 925 Query: 259 LAGILLKTAAYGLLRFSLPL-----FPNASAEFA-----PIAMWLGVIGIFYGAWMAFAQ 308 ++ +LLK+A +GL + L F ++++ W+G I I A +A Q Sbjct: 926 ISSVLLKSALFGLAKLFFVLGGAGFFTGLASQWGQPQVMYAIAWVGGITIVMAALLAVMQ 985 Query: 309 TDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHT 368 +D+K ++ Y++VS +G++++ + G+ L G ++ ++ H L LF++ G L H Sbjct: 986 SDLKLVLIYSTVSQLGYMVVGVALGTPLGMAGGMLHLVNHVLFKDLLFLVAGSLILCTHK 1045 Query: 369 RDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSF-QVVPVITVISTF 427 + +GG+ +M + A++ +G+P T F ++++ + + ++S Sbjct: 1046 HSLDELGGIGQRMPVTLTMFAIGALSVVGVPPTNGFASKWILYHALMAEGEVALALLSLA 1105 Query: 428 GLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPIL 486 G V Y LH A+ G+ ++A + L + +L ++ G +P L Sbjct: 1106 GSVLTLAYFAKFLHSAFLGRPSPELA--HVHEAPRIMLVPMGILAAGCIITGVFPGLPL 1162 >UniRef50_C0QBF3 HyfB n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBF3_DESAH Length = 655 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 115/527 (21%), Positives = 209/527 (39%), Gaps = 62/527 (11%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 + L + +PF+G + AL + +A S+ + G+ L Sbjct: 10 VFLAGAVFLPFLG------RSKRANTAGALFALAGSVMAMAASIDAITRDGFDLV----- 58 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHL-- 118 +PW G S+HL +D LS ++ L+ + + + ++ Y G HL Sbjct: 59 --------LPWKFLLG-SLHLRMDPLSGFFGLVICLVSGFSAIYGARYMDAYAGKKHLGI 109 Query: 119 ---NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFF 175 + + ++ V A + LF WE+M V + L+ + + A + Sbjct: 110 AWSLYLILTASMMLVITAWNGVLFLIAWEIMSVSSFLLVIFEFQRPGV----LKAGWIYL 165 Query: 176 IYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKM 235 + T ++L+ + + + FN + +T S L+ + I F K Sbjct: 166 VATHLGTALLLVMFMVM-----GKNNAYDFNLVQASSTGAS-----LVFILAVIGFGTKA 215 Query: 236 PVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGV 295 ++P H WLP+AH AP+ S ++ ++KT YG++R + + P A + + +G Sbjct: 216 GLLPFHVWLPEAHPAAPSHVSAVMSAAMIKTGIYGIIRICMLIGP-PKASWGWTLIIIGA 274 Query: 296 IGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTG-----------SQLAYQGAVIQ 344 + +G A AQ DIKRL+AY+SV +MG + I + G L G ++ Sbjct: 275 MTGIFGVMSALAQQDIKRLLAYSSVENMGIICIGLGLGFLALSTGHPFIGALGISGGMLH 334 Query: 345 MIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNF 404 ++ H L + LF G + HTRDM MGGL M + + A +P F Sbjct: 335 VLNHALFKSLLFFGAGSVLHSTHTRDMEKMGGLMKSMPVTGTTFVIASAAVCALPPLNGF 394 Query: 405 VGEFMILFGSFQ--------VVPVITVISTFGLVFASVYSLAMLHR---AYFGKAKSQIA 453 + EF+I FG+F + ++ L +LA + F Sbjct: 395 ISEFLIYFGAFSSLYASKGTFSVLAGILVIVSLALIGGLALACFSKAAGIVFSGHPRSSE 454 Query: 454 SQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWF 500 +++ L +++L L +L+G + ++D + Sbjct: 455 ARDAHESPLAMGIPMIVLAGLCLLVGIFSPLVIDFFQPVFETVINSL 501 >UniRef50_C7RLG5 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RLG5_9PROT Length = 499 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 151/460 (32%), Positives = 239/460 (51%), Gaps = 15/460 (3%) Query: 26 KVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDG 85 + P W A + +G ++ L T AG P +Q WI G+ + +DG Sbjct: 28 RRPPWAARLALGTSVLTLLL---SLLIVFTFDAGNPDFQFLESATWITGLGVRYLVGVDG 84 Query: 86 LSLLMVVLTGLLGVLAVLCSWKEIEK----YQGFFHLNLMWILGGVIGVFLAIDMFLFFF 141 +SLL + T LL AV+ W+ G + L+ + +GVF A+D LFFF Sbjct: 85 ISLLFLPATALLFCGAVVAGWRVTAAASPLSPGLYFALLLLLEAATLGVFCALDTILFFF 144 Query: 142 FWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATG 201 WE L+P+YFL++LWG G R AA ++F+ A G+ +L +LA VF G Sbjct: 145 CWEFTLLPLYFLVSLWG----VGNGRQAAAVRYFLVMLAGGVPLLFGLLAAVFGQAK-GG 199 Query: 202 VWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAG 261 V F+ LL TP+ GV++++ L + F VK+P+VP+H WLP AP A + L G Sbjct: 200 VLAFDLPTLLATPLPEGVQFVVFLLLLVGFGVKVPLVPVHTWLPSIAMGAPAAVTALLVG 259 Query: 262 ILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVS 321 LK AYGL+R ++PL P A+ + + G + I YG A AQ++++ ++AY S+S Sbjct: 260 --LKLGAYGLIRLAIPLAPLAARDLHWLLAGFGTLAILYGGVAALAQSNLRGVLAYASLS 317 Query: 322 HMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKM 381 H+G V++A+ + S A QGA++ M+ +S G F++ L R + D+ +GG+ M Sbjct: 318 HVGLVVLALASFSVSALQGALLLMLNFSVSTGGGFLILSFLQRRTGSTDIGHLGGVMRSM 377 Query: 382 KWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLH 441 L L F +A +G+PGT F E +I+ + + + FG V A+ LA Sbjct: 378 PLLSGFFLLFGLAGIGLPGTSGFPAELLIIVAALHSHTGAGLAALFGTVLAAAAFLAPFR 437 Query: 442 RAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 +A+FG + + E + RE ++LL +L++ +G Y Sbjct: 438 QAFFGPVHNSDVA-EAADLLPRETALLLLPALLILAIGVY 476 >UniRef50_C7Q1G6 NADH dehydrogenase (Quinone) n=2 Tax=Actinomycetales RepID=C7Q1G6_CATAD Length = 585 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 117/488 (23%), Positives = 190/488 (38%), Gaps = 25/488 (5%) Query: 9 IPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFD 68 IP G + R ++ +L + TLAL + + + + + + Sbjct: 16 IPLTGACVAPLVARLSPRLALVSSLTFLLGTLALLVVV--------SPAVFGGRVLVHYL 67 Query: 69 MPWIP--RFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIE----KYQGFFHLNLMW 122 W+P F + + A D L +L+ +G L VL + E+ + G F + Sbjct: 68 GGWVPVRGFALGVAFAADPFGLTFALLSAGIGALLVLYTLSELGGLGARELGGFAALVQL 127 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 +L G+IG L D F ++E+ + Y L + + + AA K + T +G Sbjct: 128 LLAGLIGAALTADTVDLFVWFEVAALASYGLTGFF----LERPPALEAAFKILVLTTIAG 183 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 + IA L YN G + T + L + F FA K +VP HG Sbjct: 184 FCVFIAAGLL----YNTHGALNYGQLATALTGPLQAADLLALGLFIAGFATKAGLVPFHG 239 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGA 302 WL DAH+ AP S +G+++ G+ R +L ++P A M LGV GA Sbjct: 240 WLADAHTAAPGPVSALFSGLMVNLGIVGITRIALQIYPAAHTPVLGALMVLGVASALVGA 299 Query: 303 WMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQL 362 +A Q D+KRL+AY +VS +G ++ + T G V +I H L LF+ G + Sbjct: 300 CLALVQDDLKRLLAYDTVSQVGVIVAGLATADPAGVAGGVYHLINHALFKTLLFLCAGAI 359 Query: 363 YERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVIT 422 R ++ MGGL L + G+P +V +I G + Sbjct: 360 VHRTGETELSRMGGLMRSWPGLTVAFGIGVASIAGVPPFNGYVSVGLIHTGLRDSDQYLP 419 Query: 423 -VISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 V+ + + A+ + +E + F + L VL G Sbjct: 420 YVLLLVAQLITIAALARAMWLAFLKPRREDYERREF--LRPGMRFSLGTLAGCCVLFGVL 477 Query: 482 PQPILDTS 489 P +LDT Sbjct: 478 PAYVLDTI 485 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0AFE9 NADH-quinone oxidoreductase subunit M n=205 Tax=... 472 e-131 UniRef50_A9F578 NADH dehydrogenase I chain M n=1 Tax=Sorangium c... 443 e-123 UniRef50_D1C6X8 Proton-translocating NADH-quinone oxidoreductase... 441 e-122 UniRef50_D0LZ06 Proton-translocating NADH-quinone oxidoreductase... 440 e-122 UniRef50_Q1IS53 Proton-translocating NADH-quinone oxidoreductase... 439 e-122 UniRef50_B9L177 Nadh-quinone oxidoreductase chain m n=1 Tax=Ther... 427 e-118 UniRef50_Q9I0J0 NADH-quinone oxidoreductase subunit M n=15 Tax=B... 425 e-117 UniRef50_A4XV13 Proton-translocating NADH-quinone oxidoreductase... 423 e-117 UniRef50_A3ZKZ8 Proton-translocating NADH-quinone oxidoreductase... 422 e-116 UniRef50_D2R5F8 Proton-translocating NADH-quinone oxidoreductase... 421 e-116 UniRef50_Q2IN04 Proton-translocating NADH-quinone oxidoreductase... 415 e-114 UniRef50_Q6MGN7 NADH dehydrogenase I chain M n=3 Tax=Bacteria Re... 414 e-114 UniRef50_B1ZA34 Proton-translocating NADH-quinone oxidoreductase... 412 e-113 UniRef50_Q02CT2 Proton-translocating NADH-quinone oxidoreductase... 412 e-113 UniRef50_Q1NQL7 Proton-translocating NADH-quinone oxidoreductase... 412 e-113 UniRef50_A9B6Y1 Proton-translocating NADH-quinone oxidoreductase... 410 e-113 UniRef50_B5YKJ1 NADH-quinone oxidoreductase chain m n=15 Tax=cel... 409 e-112 UniRef50_B0BZT1 Proton-translocating NAD(P)H-quinone oxidoreduct... 408 e-112 UniRef50_B1KJV9 Proton-translocating NADH-quinone oxidoreductase... 407 e-112 UniRef50_P93313 NADH-ubiquinone oxidoreductase chain 4 n=140 Tax... 406 e-111 UniRef50_B0SFU4 NADH dehydrogenase (Ubiquinone), M chain n=6 Tax... 406 e-111 UniRef50_Q2S2L1 NADH dehydrogenase i, m subunit n=7 Tax=Bacteria... 405 e-111 UniRef50_Q3BRP1 NADH-ubiquinone oxidoreductase NQO13 subunit n=1... 405 e-111 UniRef50_D2U4G9 NADH-quinone oxidoreductase chain M n=1 Tax=Arse... 402 e-110 UniRef50_C6BS86 Proton-translocating NADH-quinone oxidoreductase... 402 e-110 UniRef50_D2L5S8 Proton-translocating NADH-quinone oxidoreductase... 400 e-110 UniRef50_C4XGW9 NADH-quinone oxidoreductase chain M n=3 Tax=Desu... 400 e-110 UniRef50_A6FCN8 NuoM2 NADH-Ubiquinone/plastoquinone (Complex I) ... 399 e-109 UniRef50_B3QY39 Proton-translocating NADH-quinone oxidoreductase... 396 e-109 UniRef50_Q1DDD2 NADH dehydrogenase I, M subunit n=2 Tax=Cystobac... 395 e-108 UniRef50_B8DS13 Proton-translocating NADH-quinone oxidoreductase... 394 e-108 UniRef50_D0L251 Proton-translocating NADH-quinone oxidoreductase... 389 e-106 UniRef50_A1KRT7 NADH dehydrogenase chain M n=30 Tax=Proteobacter... 389 e-106 UniRef50_A0B819 F420H2 dehydrogenase subunit M n=2 Tax=Methanosa... 387 e-106 UniRef50_Q37617 NADH-ubiquinone oxidoreductase chain 4 n=80 Tax=... 387 e-106 UniRef50_C1ZFV0 NADH dehydrogenase subunit M n=1 Tax=Planctomyce... 386 e-105 UniRef50_D1CCC3 Proton-translocating NADH-quinone oxidoreductase... 385 e-105 UniRef50_Q39ZA6 Proton-translocating NADH-quinone oxidoreductase... 385 e-105 UniRef50_C3XEB0 NADH-quinone oxidoreductase subunit M n=1 Tax=He... 384 e-105 UniRef50_P57263 NADH-quinone oxidoreductase subunit M n=4 Tax=Bu... 383 e-105 UniRef50_C1AB27 NADH-quinone oxidoreductase chain M n=1 Tax=Gemm... 383 e-105 UniRef50_C3XM21 NADH-ubiquinone oxidoreductase n=4 Tax=Campyloba... 383 e-104 UniRef50_Q1RKE5 NADH-quinone oxidoreductase subunit M n=17 Tax=R... 382 e-104 UniRef50_A9EX60 NADH dehydrogenase (Ubiquinone) n=1 Tax=Sorangiu... 382 e-104 UniRef50_Q7NHJ9 NADH dehydrogenase subunit 4 n=1 Tax=Gloeobacter... 377 e-103 UniRef50_Q30PJ1 Proton-translocating NADH-quinone oxidoreductase... 375 e-102 UniRef50_C1DT37 NADH-quinone oxidoreductase subunit m (Nadhdehyd... 374 e-102 UniRef50_Q0RRV6 NADH-quinone oxidoreductase chain M (NADH dehydr... 373 e-102 UniRef50_D2SHE2 Proton-translocating NADH-quinone oxidoreductase... 372 e-101 UniRef50_O53307 NADH-quinone oxidoreductase subunit M n=26 Tax=A... 372 e-101 UniRef50_Q7V4E4 NAD(P)H-quinone oxidoreductase chain 4 n=43 Tax=... 372 e-101 UniRef50_D1AZ50 Proton-translocating NADH-quinone oxidoreductase... 371 e-101 UniRef50_Q9MD18 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=S... 370 e-101 UniRef50_Q3MAR0 NAD(P)H-quinone oxidoreductase chain 4 2 n=84 Ta... 370 e-101 UniRef50_A5UVF7 Proton-translocating NADH-quinone oxidoreductase... 369 e-100 UniRef50_A7NEJ8 NADH-quinone oxidoreductase, subunit M n=19 Tax=... 367 e-100 UniRef50_B2TCE8 Proton-translocating NADH-quinone oxidoreductase... 367 e-100 UniRef50_UPI00016C46D6 proton-translocating NADH-quinone oxidore... 366 1e-99 UniRef50_A7H9U2 Proton-translocating NADH-quinone oxidoreductase... 365 2e-99 UniRef50_Q7VRW3 NADH dehydrogenase I chain M n=2 Tax=Gammaproteo... 365 3e-99 UniRef50_C5AJH4 Proton-translocating NADH-quinone oxidoreductase... 364 5e-99 UniRef50_C8XBD3 Proton-translocating NADH-quinone oxidoreductase... 363 8e-99 UniRef50_D2QSX5 Proton-translocating NADH-quinone oxidoreductase... 360 5e-98 UniRef50_C4XMN2 NADH-quinone oxidoreductase chain M n=1 Tax=Desu... 360 5e-98 UniRef50_C1ZAS9 NADH dehydrogenase subunit M n=1 Tax=Planctomyce... 360 7e-98 UniRef50_UPI00019790B7 NADH dehydrogenase subunit M n=1 Tax=Heli... 360 9e-98 UniRef50_A1T694 Proton-translocating NADH-quinone oxidoreductase... 359 2e-97 UniRef50_O47497 NADH-ubiquinone oxidoreductase chain 4 n=50 Tax=... 358 2e-97 UniRef50_Q3Z7Z2 Proton-translocating NADH-quinone oxidoreductase... 358 2e-97 UniRef50_Q67KP5 NADH dehydrogenase I subunit M n=1 Tax=Symbiobac... 358 4e-97 UniRef50_C1F9D1 NADH dehydrogenase I, M subunit n=1 Tax=Acidobac... 357 5e-97 UniRef50_D2M1W1 Proton-translocating NADH-quinone oxidoreductase... 356 1e-96 UniRef50_B7K6C0 Proton-translocating NADH-quinone oxidoreductase... 355 3e-96 UniRef50_D2RZ76 Proton-translocating NADH-quinone oxidoreductase... 354 6e-96 UniRef50_Q0H8X6 NADH-ubiquinone oxidoreductase chain 4 n=10 Tax=... 353 7e-96 UniRef50_UPI00003837CC COG1009: NADH:ubiquinone oxidoreductase s... 352 2e-95 UniRef50_D2L238 Proton-translocating NADH-quinone oxidoreductase... 350 6e-95 UniRef50_C0ZYI8 NADH-quinone oxidoreductase chain M n=22 Tax=Act... 350 1e-94 UniRef50_B7GME2 NADH dehydrogenase subunit M n=6 Tax=Bacillaceae... 350 1e-94 UniRef50_Q37401 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=A... 348 2e-94 UniRef50_C7PRG9 Proton-translocating NADH-quinone oxidoreductase... 348 4e-94 UniRef50_C6D5D3 Proton-translocating NADH-quinone oxidoreductase... 348 4e-94 UniRef50_B8FRJ8 Proton-translocating NADH-quinone oxidoreductase... 348 4e-94 UniRef50_Q1H3T5 NADH dehydrogenase (Quinone) n=12 Tax=Proteobact... 347 6e-94 UniRef50_A5UXL0 Proton-translocating NADH-quinone oxidoreductase... 347 9e-94 UniRef50_Q3JBP3 Proton-translocating NADH-quinone oxidoreductase... 345 2e-93 UniRef50_A4FPS9 NADH dehydrogenase I chain M n=1 Tax=Saccharopol... 345 3e-93 UniRef50_B5IL09 NAD(P)H dehydrogenase I, subunit D-2 n=3 Tax=Cya... 343 8e-93 UniRef50_D2SDG3 Proton-translocating NADH-quinone oxidoreductase... 343 1e-92 UniRef50_Q466B7 F420H2 dehydrogenase subunit M n=3 Tax=Methanosa... 342 2e-92 UniRef50_D1BBE0 NADH dehydrogenase subunit M n=1 Tax=Sanguibacte... 342 2e-92 UniRef50_A0AL63 Complete genome n=20 Tax=Bacillales RepID=A0AL63... 341 4e-92 UniRef50_C0VVK4 NADH dehydrogenase subunit M n=2 Tax=Corynebacte... 340 5e-92 UniRef50_Q0BU96 NADH-quinone oxidoreductase chain M n=12 Tax=Ace... 340 7e-92 UniRef50_Q46LV6 Proton-translocating NADH-quinone oxidoreductase... 340 9e-92 UniRef50_B0CBT4 Proton-translocating NAD(P)H-quinone oxidoreduct... 340 9e-92 UniRef50_Q9G8V8 NADH-ubiquinone oxidoreductase chain 4 n=8 Tax=E... 340 1e-91 UniRef50_Q89AT5 NADH-quinone oxidoreductase subunit M n=2 Tax=ce... 339 1e-91 UniRef50_B9XHI7 Proton-translocating NADH-quinone oxidoreductase... 339 1e-91 UniRef50_A8LTG8 NADH dehydrogenase (Quinone) n=58 Tax=Proteobact... 338 2e-91 UniRef50_A0LEQ7 Proton-translocating NADH-quinone oxidoreductase... 338 2e-91 UniRef50_A1SE39 Proton-translocating NADH-quinone oxidoreductase... 338 2e-91 UniRef50_Q52978 Probable K(+)/H(+) antiporter subunit A/B n=110 ... 338 3e-91 UniRef50_C6X103 NADH-ubiquinone oxidoreductase chain M n=2 Tax=F... 338 3e-91 UniRef50_Q6UVR8 NADH-ubiquinone oxidoreductase chain 4 n=5 Tax=V... 335 2e-90 UniRef50_Q2GKR0 NADH dehydrogenase I, M subunit n=5 Tax=Anaplasm... 335 2e-90 UniRef50_Q3JBP7 Proton-translocating NADH-quinone oxidoreductase... 335 2e-90 UniRef50_A6L163 NADH dehydrogenase I chain M n=18 Tax=Bacteroide... 335 3e-90 UniRef50_B9XFX2 Proton-translocating NADH-quinone oxidoreductase... 334 4e-90 UniRef50_Q5FHA2 NADH-quinone oxidoreductase chain M n=11 Tax=Ric... 334 4e-90 UniRef50_Q3A816 NADH dehydrogenase I chain M n=1 Tax=Pelobacter ... 334 4e-90 UniRef50_C0Z764 NADH-quinone oxidoreductase chain M n=2 Tax=Baci... 334 4e-90 UniRef50_Q11VC4 NADH dehydrogenase I chain M n=1 Tax=Cytophaga h... 333 6e-90 UniRef50_C7M2U9 Proton-translocating NADH-quinone oxidoreductase... 333 9e-90 UniRef50_A5FKK8 NADH dehydrogenase subunit M n=2 Tax=Flavobacter... 332 2e-89 UniRef50_B3EIA1 Proton-translocating NADH-quinone oxidoreductase... 332 2e-89 UniRef50_C9MQ80 NADH dehydrogenase, M subunit n=18 Tax=Bacteroid... 332 2e-89 UniRef50_Q1ZRW3 NADH dehydrogenase I, M subunit n=2 Tax=Photobac... 332 2e-89 UniRef50_UPI0001C3347B NADH dehydrogenase subunit M n=6 Tax=Cyan... 332 3e-89 UniRef50_B9W1R4 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=G... 332 3e-89 UniRef50_C5C0R5 Proton-translocating NADH-quinone oxidoreductase... 331 5e-89 UniRef50_Q9ZJV5 NADH oxidoreductase I n=12 Tax=Helicobacter RepI... 330 9e-89 UniRef50_C2KMP1 NADH dehydrogenase (Quinone) n=4 Tax=Actinomycet... 329 1e-88 UniRef50_D1PWI6 Proton-translocating NADH-quinone oxidoreductase... 329 1e-88 UniRef50_A7UQZ1 AGAP012727-PA (Fragment) n=1 Tax=Anopheles gambi... 329 2e-88 UniRef50_Q12ZH7 Na+/H+ antiporter subunit n=2 Tax=Methanosarcina... 329 2e-88 UniRef50_C2BM70 CPA3 family monovalent cation:proton (H+) antipo... 328 3e-88 UniRef50_Q9RGZ5 Na(+)/H(+) antiporter subunit A n=9 Tax=Firmicut... 328 4e-88 UniRef50_A4WT79 Proton-translocating NADH-quinone oxidoreductase... 327 5e-88 UniRef50_Q49W91 Na(+)/H(+) antiporter subunit A1 n=19 Tax=Bacill... 327 7e-88 UniRef50_A8ERK4 NADH-quinone oxidoreductase, M subunit n=1 Tax=A... 327 8e-88 UniRef50_C1A8Y2 NADH-quinone oxidoreductase chain M n=1 Tax=Gemm... 327 9e-88 UniRef50_B3QY40 Proton-translocating NADH-quinone oxidoreductase... 327 9e-88 UniRef50_C0WGQ4 CPA3 family monovalent cation:proton (H+) antipo... 327 9e-88 UniRef50_D1BW17 Proton-translocating NADH-quinone oxidoreductase... 326 1e-87 UniRef50_UPI0001C3127E proton-translocating NADH-quinone oxidore... 324 5e-87 UniRef50_C7P4L7 Proton-translocating NADH-quinone oxidoreductase... 324 5e-87 UniRef50_B2A694 NADH dehydrogenase (Quinone) n=1 Tax=Natranaerob... 324 6e-87 UniRef50_B8G566 Proton-translocating NADH-quinone oxidoreductase... 324 6e-87 UniRef50_B9XHI6 Proton-translocating NADH-quinone oxidoreductase... 323 9e-87 UniRef50_C9RKX5 Proton-translocating NADH-quinone oxidoreductase... 323 1e-86 UniRef50_C7NIQ7 NADH:ubiquinone oxidoreductase subunit 5 (Chain ... 323 1e-86 UniRef50_Q1AZS5 Proton-translocating NADH-quinone oxidoreductase... 322 2e-86 UniRef50_B0R3V0 NADH dehydrogenase-like complex subunit M n=9 Ta... 321 4e-86 UniRef50_B9DJY9 Putative NADH dehydrogenase I chain L n=1 Tax=St... 320 6e-86 UniRef50_C0A9K9 NADH dehydrogenase (Quinone) n=1 Tax=Opitutaceae... 320 1e-85 UniRef50_C5QQQ5 CPA3 family monovalent cation:proton (H+) antipo... 320 1e-85 UniRef50_O21047 NADH-ubiquinone oxidoreductase chain 4 n=3 Tax=D... 319 2e-85 UniRef50_Q37375 NADH-ubiquinone oxidoreductase chain 4 n=2 Tax=E... 318 2e-85 UniRef50_Q12ZH4 Na+/H+ antiporter subunit n=2 Tax=Methanosarcina... 318 2e-85 UniRef50_B9XFX1 Proton-translocating NADH-quinone oxidoreductase... 318 3e-85 UniRef50_Q2FZV1 Na(+)/H(+) antiporter subunit A1 n=72 Tax=Bacill... 316 9e-85 UniRef50_Q6MDQ4 Putative NADH-ubiquinone oxidoreductase chain M ... 316 1e-84 UniRef50_Q0FXW0 NADH dehydrogenase subunit 4 n=3 Tax=Alphaproteo... 316 1e-84 UniRef50_B2XX63 NADH-ubiquinone oxidoreductase chain 4 n=3 Tax=D... 316 1e-84 UniRef50_C1F221 NADH dehydrogenase I, M subunit n=1 Tax=Acidobac... 315 2e-84 UniRef50_D2PVJ1 Proton-translocating NADH-quinone oxidoreductase... 315 2e-84 UniRef50_Q1AVJ1 Proton-translocating NADH-quinone oxidoreductase... 315 3e-84 UniRef50_B7HY49 NADH dehydrogenase (Ubiquinone), M subunit n=71 ... 315 4e-84 UniRef50_B2A3T0 NADH dehydrogenase (Quinone) n=2 Tax=Clostridia ... 314 4e-84 UniRef50_UPI0001C30612 NADH dehydrogenase subunit 4 n=1 Tax=Phae... 314 4e-84 UniRef50_Q609T5 Hydrogenase subunit n=1 Tax=Methylococcus capsul... 314 5e-84 UniRef50_C4LLM4 Na(+)/H(+) antiporter subunit n=3 Tax=Corynebact... 314 6e-84 UniRef50_B4U8I0 Proton-translocating NADH-quinone oxidoreductase... 314 6e-84 UniRef50_D0XMF8 NADH dehydrogenase (Quinone) n=3 Tax=Alphaproteo... 313 7e-84 UniRef50_C9RWL8 Proton-translocating NADH-quinone oxidoreductase... 313 7e-84 UniRef50_B4SLF9 NADH dehydrogenase (Quinone) n=20 Tax=cellular o... 313 8e-84 UniRef50_Q950R4 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=S... 313 9e-84 UniRef50_UPI00005100B6 putative monovalent cation/H+ antiporter ... 313 9e-84 UniRef50_C5A2R1 Formate hydrogenlyase II subunit D (Mhy2D) n=1 T... 313 1e-83 UniRef50_C6V5H6 NADH-quinone oxidoreductase chain m n=2 Tax=Neor... 313 1e-83 UniRef50_A6TVL4 NADH dehydrogenase (Quinone) n=2 Tax=Alkaliphilu... 312 2e-83 UniRef50_C0YTV8 NADH dehydrogenase I chain L n=1 Tax=Chryseobact... 312 2e-83 UniRef50_Q8R9B0 Formate hydrogenlyase subunit 3/Multisubunit Na+... 311 3e-83 UniRef50_C8NJU8 NADH ubiquinone oxidoreductase subunit 5 (Chain ... 311 5e-83 UniRef50_A9A3Z6 Proton-translocating NADH-quinone oxidoreductase... 310 8e-83 UniRef50_Q67NV3 Na+/H+ antiporter subunit n=1 Tax=Symbiobacteriu... 310 1e-82 UniRef50_Q9RVZ0 NADH-ubiquinone/plastoquinone subunit, putative ... 309 1e-82 UniRef50_P26288 NAD(P)H-quinone oxidoreductase chain 4, chloropl... 309 2e-82 UniRef50_B6YTY8 Membrane bound hydrogenase, MbhH subunit n=9 Tax... 308 3e-82 UniRef50_C0XU58 CPA3 family monovalent cation (K+ or Na+):proton... 308 3e-82 UniRef50_Q04YB3 NADH dehydrogenase (Ubiquinone), L chain n=7 Tax... 308 3e-82 UniRef50_Q6GBK7 Putative antiporter subunit mnhA2 n=63 Tax=Staph... 308 3e-82 UniRef50_A6Q8K1 NADH-quinone oxidoreductase, chain M n=3 Tax=Eps... 308 4e-82 UniRef50_C6D5D4 Proton-translocating NADH-quinone oxidoreductase... 307 5e-82 UniRef50_Q5EM42 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=M... 307 5e-82 UniRef50_B1ZBB1 Proton-translocating NADH-quinone oxidoreductase... 307 6e-82 UniRef50_C1F222 NADH dehydrogenase I, M subunit n=1 Tax=Acidobac... 307 8e-82 UniRef50_A9B486 Proton-translocating NADH-quinone oxidoreductase... 306 8e-82 UniRef50_C8W236 Hydrogenase, membrane subunit n=1 Tax=Desulfotom... 306 2e-81 UniRef50_A5UV30 NADH dehydrogenase (Quinone) n=4 Tax=Bacteria Re... 306 2e-81 UniRef50_D1A432 Proton-translocating NADH-quinone oxidoreductase... 305 3e-81 UniRef50_B6YQ51 NADH dehydrogenase I subunit L n=32 Tax=Bacteroi... 305 3e-81 UniRef50_D0LWA1 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Ta... 305 3e-81 UniRef50_A6TVL5 NADH dehydrogenase (Quinone) n=1 Tax=Alkaliphilu... 305 4e-81 UniRef50_C0Z765 NADH-quinone oxidoreductase chain L n=2 Tax=Baci... 305 4e-81 UniRef50_Q47T29 NADH dehydrogenase (Quinone) n=4 Tax=Actinomycet... 304 5e-81 UniRef50_C7NST6 NADH dehydrogenase (Quinone) n=4 Tax=Halobacteri... 304 6e-81 UniRef50_C0GDB1 NADH dehydrogenase (Quinone) n=2 Tax=Dethiobacte... 304 7e-81 UniRef50_D2QSX4 Proton-translocating NADH-quinone oxidoreductase... 303 8e-81 UniRef50_Q85JB2 NADH-ubiquinone oxidoreductase chain 4 n=4 Tax=M... 303 8e-81 UniRef50_C5C4D6 NADH dehydrogenase (Quinone) n=2 Tax=Micrococcin... 303 1e-80 UniRef50_A9YMC4 NADH-ubiquinone oxidoreductase chain 4 n=17 Tax=... 303 2e-80 UniRef50_Q11VC3 NADH dehydrogenase I chain L n=5 Tax=Bacteroidet... 302 2e-80 UniRef50_A6LXP7 Proton-translocating NADH-quinone oxidoreductase... 302 2e-80 UniRef50_C9RKX6 Proton-translocating NADH-quinone oxidoreductase... 302 2e-80 UniRef50_B8FRJ9 Proton-translocating NADH-quinone oxidoreductase... 302 3e-80 UniRef50_B2A693 Proton-translocating NADH-quinone oxidoreductase... 301 3e-80 UniRef50_B0BZT2 Proton-translocating NAD(P)H-quinone oxidoreduct... 301 3e-80 UniRef50_B0VE74 pH adaptation potassium efflux system transmembr... 301 4e-80 UniRef50_C5NVG1 Na(+)/H(+) antiporter subunit A n=1 Tax=Gemella ... 301 4e-80 UniRef50_D2S7T6 NADH dehydrogenase (Quinone) n=1 Tax=Geodermatop... 300 6e-80 UniRef50_Q28L00 NADH dehydrogenase (Quinone) n=1 Tax=Jannaschia ... 300 7e-80 UniRef50_C1F220 NADH dehydrogenase I, L subunit n=2 Tax=Bacteria... 300 8e-80 UniRef50_A0QQR3 NADH ubiquinone oxidoreductase subunit 5 n=9 Tax... 300 9e-80 UniRef50_C7MG69 NADH:ubiquinone oxidoreductase subunit 5 (Chain ... 300 9e-80 UniRef50_C8XH11 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Ta... 300 1e-79 UniRef50_C7RLG1 Proton-translocating NADH-quinone oxidoreductase... 299 1e-79 UniRef50_C6CN10 NADH/Ubiquinone/plastoquinone (Complex I) n=15 T... 298 3e-79 UniRef50_B1KJV8 Proton-translocating NADH-quinone oxidoreductase... 298 3e-79 UniRef50_C4V3R7 NADH dehydrogenase (Quinone) n=1 Tax=Selenomonas... 298 3e-79 UniRef50_C9N9J1 NADH dehydrogenase (Quinone) n=12 Tax=Streptomyc... 298 5e-79 UniRef50_B1ZSE3 NADH dehydrogenase (Quinone) n=1 Tax=Opitutus te... 298 5e-79 UniRef50_B1ZRS1 Proton-translocating NADH-quinone oxidoreductase... 297 6e-79 UniRef50_A0EYN0 NADH-ubiquinone oxidoreductase chain 4 n=2 Tax=X... 297 6e-79 UniRef50_C0W918 Na(+)/H(+) antiporter subunit n=1 Tax=Actinomyce... 297 6e-79 UniRef50_B5EN60 Proton-translocating NADH-quinone oxidoreductase... 296 9e-79 UniRef50_A1WYN7 NADH dehydrogenase (Quinone) n=5 Tax=Gammaproteo... 296 1e-78 UniRef50_B6YTX9 Hydrogenase 4, component F or formate hydrogen l... 296 1e-78 UniRef50_A5G8U2 NADH dehydrogenase (Quinone) n=13 Tax=Desulfurom... 296 1e-78 UniRef50_Q9G8P5 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=N... 296 2e-78 UniRef50_Q1AVJ0 Proton-translocating NADH-quinone oxidoreductase... 296 2e-78 UniRef50_C5C6P2 NADH:ubiquinone oxidoreductase subunit 5 (Chain ... 296 2e-78 UniRef50_Q3AH00 Proton-translocating NADH-quinone oxidoreductase... 296 2e-78 UniRef50_C4ZJD8 NADH/Ubiquinone/plastoquinone (Complex I) n=2 Ta... 296 2e-78 UniRef50_A6DPK7 NADH-ubiquinone/plastoquinone family protein n=1... 295 2e-78 UniRef50_A0RME0 NADH-quinone oxidoreductase chain m n=1 Tax=Camp... 295 2e-78 UniRef50_Q9UYP1 Hydrogenase 4, component F or formate hydrogen l... 294 5e-78 UniRef50_A4XS82 NADH dehydrogenase (Quinone) n=1 Tax=Pseudomonas... 294 5e-78 UniRef50_C7R7H2 Proton-translocating NADH-quinone oxidoreductase... 294 6e-78 UniRef50_D2BHY2 NADH:quinone oxidoreductase subunit 5 (Chain L) ... 294 7e-78 UniRef50_B3QPF9 NADH dehydrogenase (Quinone) n=1 Tax=Chlorobacul... 294 7e-78 UniRef50_A1API0 Proton-translocating NADH-quinone oxidoreductase... 294 7e-78 Sequences not found previously or not previously below threshold: UniRef50_B1WQD4 NADH dehydrogenase subunit 5 n=9 Tax=Cyanobacter... 300 9e-80 UniRef50_A9EX64 NADH dehydrogenase (Ubiquinone) n=3 Tax=cellular... 298 4e-79 UniRef50_Q9XAR5 NADH-quinone oxidoreductase subunit L n=38 Tax=A... 298 4e-79 UniRef50_Q1RKE6 NADH-quinone oxidoreductase subunit L n=15 Tax=R... 296 1e-78 UniRef50_P31971 NAD(P)H-quinone oxidoreductase chain 5 n=25 Tax=... 296 1e-78 UniRef50_B5YKJ0 NADH-quinone oxidoreductase chain l n=1 Tax=Ther... 295 2e-78 UniRef50_B8J1C9 Proton-translocating NADH-quinone oxidoreductase... 294 6e-78 >UniRef50_P0AFE9 NADH-quinone oxidoreductase subunit M n=205 Tax=Gammaproteobacteria RepID=NUOM_ECO57 Length = 509 Score = 472 bits (1217), Expect = e-131, Method: Composition-based stats. Identities = 509/509 (100%), Positives = 509/509 (100%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI Sbjct: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL Sbjct: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA Sbjct: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL Sbjct: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY Sbjct: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG Sbjct: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV Sbjct: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF Sbjct: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 Query: 481 YPQPILDTSHSAIGNIQQWFVNSVTTTRP 509 YPQPILDTSHSAIGNIQQWFVNSVTTTRP Sbjct: 481 YPQPILDTSHSAIGNIQQWFVNSVTTTRP 509 >UniRef50_A9F578 NADH dehydrogenase I chain M n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F578_SORC5 Length = 754 Score = 443 bits (1141), Expect = e-123, Method: Composition-based stats. Identities = 179/517 (34%), Positives = 272/517 (52%), Gaps = 31/517 (5%) Query: 2 LLPWLILIPFIGGFLCWQ---TERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSA 58 +L L +P +G + + R + ++ MG+ L L+ L+ Q T++ Sbjct: 194 ILSILTFLPLLGVVAVFLAHLLRYRDDRKLRLMTVVLMGVNLVLAAWLYAQFDRGFTRAD 253 Query: 59 GIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHL 118 G +Q WI + + +DG+S+ MV+LT L+ + L S+ + + Sbjct: 254 GNDGYQFIEHGVWIRSLNVEYFVGVDGVSISMVLLTALISFVGALASYS-VHDQLKGYFA 312 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 ++ G+ GVF+A+D+FLFF FWE+ML+PMYFLI +WG G R AA KFF+YT Sbjct: 313 MYNLLVTGMFGVFIALDLFLFFVFWEVMLLPMYFLIGIWG-----GPRREYAAIKFFLYT 367 Query: 179 QASGLVMLIAILALVFVHYNATGVW------TFNYEELLNTP--------MSSGVEYLLM 224 A + ML+A + + V F+ EL + ++ Sbjct: 368 LAGSVFMLLAFIWFYLNAGHTYLVDGQATERIFSIPELSRVAWAAQGLTILGVAAVKVVW 427 Query: 225 LGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASA 284 + F+ FA+K+P+ P H WLPDAH +APTA SV LAG+LLK YG+LR + L P A+ Sbjct: 428 IWLFVGFAIKIPMFPFHTWLPDAHVEAPTAISVILAGVLLKMGTYGILRINFTLLPEATQ 487 Query: 285 EFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQ 344 AP GV+ I YGA+ A AQ+D+K+L+AY+SVSHMGF L+A+ + Q ++Q Sbjct: 488 WAAPAMAVFGVVNILYGAFCAMAQSDLKKLVAYSSVSHMGFTLLALGAMTPQGIQACLVQ 547 Query: 345 MIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNF 404 M HGL LF L G +Y+R+HTRD+ GGL S+M AL F +A+LG+PG F Sbjct: 548 MFNHGLITGMLFTLVGVVYDRVHTRDIDRFGGLASEMPLYTALVGFAFMASLGLPGLSGF 607 Query: 405 VGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKS--------QIASQE 456 GE M G+F +T+++ G++ + Y L L R + G ++ + + Sbjct: 608 WGEAMTFIGAFPRYRALTILAAVGVILTAAYHLWALQRMFLGTFRASWRQSKYLEPFGGK 667 Query: 457 LPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAI 493 P +S REL I L L+++LGF+P+P+L Sbjct: 668 FPEISGRELASIAPLAALVLVLGFWPRPLLSLIDRGA 704 >UniRef50_D1C6X8 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6X8_SPHTD Length = 527 Score = 441 bits (1134), Expect = e-122, Method: Composition-based stats. Identities = 187/530 (35%), Positives = 294/530 (55%), Gaps = 40/530 (7%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L L +P +G + + + + RW+AL ++LALSL + S + Sbjct: 6 ILSALTYVPLVGAAIIFFWPKASPQAARWVALGASLVSLALSLVMLAGFDTSAS------ 59 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q W+P G+S H +DG+S+L++VL+ LL + ++ SW I+ + + ++ Sbjct: 60 GMQFVERFEWLPALGVSYHFGVDGISVLLIVLSTLLTTIGIVASWSSIQHRVREYMITML 119 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + G++GVF+++D+FLF+ FWE+ML+PM LI +WG R+ AA KFF+YT A Sbjct: 120 MLETGMLGVFVSLDLFLFYIFWEVMLIPMALLIGVWGS-----ANRVYAAVKFFLYTLAG 174 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 L+ML+ I+AL ++ TG+ T + +L + + FFIAFA+K+P+ P H Sbjct: 175 SLLMLVGIIALYQSYFEQTGIRTLDVLQLQQGNYGYTFQMWVFAAFFIAFAIKVPMWPFH 234 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLPDAH +APTAGSV LAG+LLK YGLLRF+LPLFP+A+ ++AP+ + L VIGI YG Sbjct: 235 TWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFNLPLFPDAARDWAPVIIVLSVIGIIYG 294 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 A +A Q D+K+L+AY+SVSHMGFV + I+ + GA+I M++HGL + LF+ G Sbjct: 295 ALVALVQPDLKKLVAYSSVSHMGFVTLGIFAFNAQGLYGAMIVMLSHGLVTSALFLCVGV 354 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 +Y+R HTR + GGL + M + F A+LG+PG FVGEF+ + G+F+ Sbjct: 355 IYDRGHTRLISRFGGLATNMPVYASFLGLFTFASLGLPGLSGFVGEFLSILGAFRAERAA 414 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIA---------------------------- 453 VI+ ++F++ Y L M R + +A + Sbjct: 415 GVIAFLVVIFSAWYMLWMYQRVAWQRAPGEPPDANDPEAKLAGDEPRPVMGGAEHGGDVV 474 Query: 454 -SQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVN 502 + ++ RE + L VL + +G YPQ ++ +A+ + + F Sbjct: 475 DPRTFRDVTWREAMTLAPLAVLTIWMGVYPQWFMNFLRTALELVAKPFGG 524 >UniRef50_D0LZ06 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LZ06_HALO1 Length = 585 Score = 440 bits (1132), Expect = e-122, Method: Composition-based stats. Identities = 185/492 (37%), Positives = 277/492 (56%), Gaps = 19/492 (3%) Query: 13 GGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWI 72 G L R + R + L LT LSL ++ + Q+Q D+PWI Sbjct: 17 GALLIMLLPREEAGLCRAVGLGFSLLTFGLSLGIFGYF------ESANAQFQLVIDLPWI 70 Query: 73 PRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFL 132 G L IDG+SL +VVLT + +L S+ I K + F ++ + G++G F+ Sbjct: 71 DGLGAHFKLGIDGISLWLVVLTTFTMPIVLLSSYSSIHKREREFVALMLVLELGMLGAFV 130 Query: 133 AIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILAL 192 ++D+FLF+ FWE+ML+PMY LI +WG G RI A+ KF IYT L+ML AI + Sbjct: 131 SLDLFLFYIFWELMLIPMYLLIGIWG-----GNRRIYASIKFVIYTMVGSLLMLAAIFYV 185 Query: 193 VFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAP 252 VH G +T + E + +S + F +AFA+K+P+ PLH WLPDAH QAP Sbjct: 186 YVVHAEVAGFYTTDLEAVQRVLLSRDAQVWCFAAFALAFAIKVPLFPLHTWLPDAHVQAP 245 Query: 253 TAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIK 312 T GSV LAG+LLK YG LRF++P+FP ++ AP L V GI YGA +AFAQ D+K Sbjct: 246 TTGSVVLAGVLLKFGVYGFLRFAVPMFPYGTSVVAPYLAILAVAGIIYGALVAFAQDDVK 305 Query: 313 RLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMR 372 +L+AY+SVSH+GF ++ +++ + +G++ M++HGL+ GLF+ G LYER HTR M Sbjct: 306 KLVAYSSVSHLGFCILGLFSMTARGIEGSIFAMLSHGLTTGGLFLAIGVLYERRHTRRMA 365 Query: 373 MMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP-------VITVIS 425 GGLW++M + L + + G+PG F+GEF+ +FG+F ++ ++ Sbjct: 366 EYGGLWAQMPVFAGVFLICTLGSAGLPGLSGFIGEFLTIFGTFTTSAAYLPAPRLLGALA 425 Query: 426 TFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPI 485 G++ +VY L M + FG A++ L +S RE+ + LVV++ ++G PQP Sbjct: 426 ATGVILGAVYLLFMFQKLMFGPITRD-ANRGLRDLSGREMVVFAPLVVMIFVMGVAPQPF 484 Query: 486 LDTSHSAIGNIQ 497 L T ++ Sbjct: 485 LKTMEPSVERFI 496 >UniRef50_Q1IS53 Proton-translocating NADH-quinone oxidoreductase, chain M n=16 Tax=Bacteria RepID=Q1IS53_ACIBL Length = 559 Score = 439 bits (1131), Expect = e-122, Method: Composition-based stats. Identities = 188/505 (37%), Positives = 282/505 (55%), Gaps = 10/505 (1%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L ++ P G L + RWIA + +SL L ++ Sbjct: 6 ILSIVLFTPLAGAILLLMVPKENKNAIRWIANLAALAGFLVSLPLIPWFWAVKSEVTPYF 65 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 ++ WIP G L IDG+S L+++LT LLG +++L SW IE ++ + Sbjct: 66 KFAEGSTNNWIPSIGAGYQLGIDGISFLLIILTTLLGSISILSSWTAIENRVKEYYAWFL 125 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + G++GVF+A D FLFF FWE MLVPMY LI +WG G ++ AA KFF+YT A Sbjct: 126 LLQTGMLGVFMANDFFLFFVFWEAMLVPMYLLIGIWG-----GPRKLYAAIKFFLYTLAG 180 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTP--MSSGVEYLLMLGFFIAFAVKMPVVP 239 ++ML+ IL L F H+ TGV+TF+ E L T ++ L FF+ FA+K+P+ P Sbjct: 181 SVLMLLGILFLYFHHHTVTGVYTFSLEALYATAPLITGKAAIFLFFAFFVGFAIKVPMFP 240 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNAS--AEFAPIAMWLGVIG 297 H WLPDAH +APTAGSV LAG+LLK YGL+RFSLP FP + + + L +IG Sbjct: 241 FHTWLPDAHVEAPTAGSVILAGVLLKMGTYGLIRFSLPFFPAVATIKWVQALLITLSLIG 300 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 I YGA ++ Q D+K+L+AY+SVSH+GF + I+ +Q+ G+VIQ I HG+S LF+ Sbjct: 301 ILYGALVSLVQKDMKKLVAYSSVSHLGFCTLGIFVFTQMGIAGSVIQQINHGISTGALFL 360 Query: 358 LCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV 417 + G LYER HTR++ GG+ + M ++L ++++G+P FVGE I+ +F V Sbjct: 361 IVGILYERRHTREISEYGGISTVMPVYATIALIMFMSSMGLPLLNGFVGEMPIMMATFMV 420 Query: 418 VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVL 477 + + G+V A+ Y L + R +FG + +++L ++ REL + LV+L + Sbjct: 421 NKTWAIWAIPGVVLAAAYLLWLYQRVFFGTVTNP-KNEKLADLTPRELATFVPLVILALA 479 Query: 478 LGFYPQPILDTSHSAIGNIQQWFVN 502 +G YPQP+ ++ Sbjct: 480 IGLYPQPLFKILDQPAAKLEATINA 504 >UniRef50_B9L177 Nadh-quinone oxidoreductase chain m n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L177_THERP Length = 524 Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats. Identities = 187/528 (35%), Positives = 284/528 (53%), Gaps = 41/528 (7%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L + P +G + + + RWIAL+ ++ LS+ + + + Sbjct: 6 ILSLITYSPLVGAAILFLWGGASPRAARWIALLASSVSFLLSVVMLVAFDRDQST----- 60 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q W+P GI+ L +DG+S +V LT LL ++AVL SW I +++ L+ Sbjct: 61 -LQFTETFDWLPELGIAYRLGVDGISAPLVGLTTLLTLIAVLASWDPIRHRVREYYITLL 119 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + G++GVF+++D+FLF+ FWE++L+PM +I +WG R+ AA KFF+YT A Sbjct: 120 LLATGMLGVFVSLDLFLFYVFWEIVLIPMALIIGVWGS-----ANRVYAAVKFFLYTLAG 174 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 L+ML+ I+A+ ++ TG+ T + +L S ++ L FF+AFA+K+P+ P H Sbjct: 175 SLLMLVGIVAIYQEYFRQTGIRTLDVLQLAQGQYSEAFQFWTFLAFFLAFAIKVPMWPFH 234 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLPDAH +APTAGSV LAG+LLK YG LRF+LPLFP+A+ +AP + L VI I YG Sbjct: 235 TWLPDAHVEAPTAGSVILAGVLLKMGGYGFLRFNLPLFPDATRMWAPAIVVLSVIAILYG 294 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 A MA Q D K+L+AY+SVSHMGFV + I+ +Q GA++ M++HG + LF++ G Sbjct: 295 ALMALVQQDFKKLVAYSSVSHMGFVTLGIFVLNQPGLSGAMVVMLSHGFVTSALFLIVGV 354 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 LYER HTRD+ GGL M A F +A+LG+PG FVGEF+ L G F+ Sbjct: 355 LYERAHTRDLAAFGGLARNMPVFAAFFGLFTLASLGLPGLSGFVGEFLALLGGFRAYRWA 414 Query: 422 TVISTFGLVFASVYSLAMLHRAYF------------------------------GKAKSQ 451 V+ T ++ A+ Y L + R + Sbjct: 415 GVLGTIVVILAAWYMLRVYQRVALVRAPGEPPDPDDPERRLALAHGLPPIAGGSDGPHAY 474 Query: 452 IASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQW 499 + P ++ RE +L L +L + +G YP P+L+ A+ + Sbjct: 475 PDPRTFPDLTWREAVSLLPLALLTIWIGVYPLPLLEMLEPALAALLGR 522 >UniRef50_Q9I0J0 NADH-quinone oxidoreductase subunit M n=15 Tax=Bacteria RepID=NUOM_PSEAE Length = 509 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 370/509 (72%), Positives = 433/509 (85%), Gaps = 5/509 (0%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 M+LPWLILIPFIGGFLCW E +PRWIAL++M L L LSL +W G + L + G Sbjct: 1 MILPWLILIPFIGGFLCWIAEHSSKTLPRWIALLSMTLVLILSLWIWATGDFQLAPAPGG 60 Query: 61 -PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLN 119 P+W +F + WI R GISIHLA+DGLSLLMV LTGLLGVL+VLCSW EI++ GFFHLN Sbjct: 61 EPEWTLQFKVLWIERLGISIHLAMDGLSLLMVALTGLLGVLSVLCSWNEIQRRIGFFHLN 120 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKT-RITAATKFFIYT 178 L+WILGGVIGVFLAID+FLFFFFWEMMLVPMYFLIALWGH + DGK RI AATKFFI+T Sbjct: 121 LLWILGGVIGVFLAIDLFLFFFFWEMMLVPMYFLIALWGHSSDDGKKTRIYAATKFFIFT 180 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 QASGLVML+AIL LVFV++NATGV TF+Y LL T +S VE+LLMLGFF+AFAVKMPVV Sbjct: 181 QASGLVMLVAILGLVFVNFNATGVITFDYATLLKTQLSPHVEWLLMLGFFVAFAVKMPVV 240 Query: 239 PLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 P+H WLPDAH+QAPTAGSVDLAGILLKTAAYGL+RF+LPLFPNASAEFAPIAMWLG+IGI Sbjct: 241 PVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFALPLFPNASAEFAPIAMWLGIIGI 300 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFIL 358 FYGA ++FAQTDIKRL+AY+SVSHMGFV+I IY+GSQ+A QG V+QMIAHGLSAA LFIL Sbjct: 301 FYGALLSFAQTDIKRLVAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFIL 360 Query: 359 CGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVV 418 CGQLYER+HTRDMR MGGLWS+M +LPA+SLFFA A+LG+PGTGNFVGEF+IL G+F+VV Sbjct: 361 CGQLYERLHTRDMRKMGGLWSRMPYLPAISLFFASASLGLPGTGNFVGEFLILIGAFKVV 420 Query: 419 PVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLL 478 PVI VI+TFGLVFASVYSL M+HRAYFG ++S + + G+ REL M+L L VLLVLL Sbjct: 421 PVIIVIATFGLVFASVYSLIMIHRAYFGPSQSD---EPILGLDARELSMVLGLAVLLVLL 477 Query: 479 GFYPQPILDTSHSAIGNIQQWFVNSVTTT 507 G YPQP+LD S +++ +QQW +++T Sbjct: 478 GVYPQPVLDISAASMHGVQQWLGAALSTL 506 >UniRef50_A4XV13 Proton-translocating NADH-quinone oxidoreductase, chain M n=10 Tax=Proteobacteria RepID=A4XV13_PSEMY Length = 509 Score = 423 bits (1088), Expect = e-117, Method: Composition-based stats. Identities = 368/508 (72%), Positives = 427/508 (84%), Gaps = 4/508 (0%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSA-G 59 M+LPWLILIPFIGG LCWQ ERFG +PRW+ALITMGL L L L LW G ++L + G Sbjct: 1 MILPWLILIPFIGGLLCWQGERFGHVLPRWLALITMGLLLGLGLWLWASGDFTLAPAPDG 60 Query: 60 IPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLN 119 P+W EF + WIPR GI+IHLA+DGLS+LMVVLTGLLGVL+VLCSW EI+ GFFHLN Sbjct: 61 GPRWAHEFVIDWIPRLGITIHLAMDGLSVLMVVLTGLLGVLSVLCSWNEIQHRVGFFHLN 120 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 LMWILGGV+GVFLA+D+FLFFFFWEMMLVPMYFLIALWGH SDG+TRITAATKFFI+TQ Sbjct: 121 LMWILGGVVGVFLAVDLFLFFFFWEMMLVPMYFLIALWGHSGSDGRTRITAATKFFIFTQ 180 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 ASGL+ML+AILALV VH+N TGV TFNY +LL T ++ G EYLLMLGFFIAFAVK PVVP Sbjct: 181 ASGLIMLVAILALVLVHFNQTGVLTFNYADLLQTELAPGTEYLLMLGFFIAFAVKFPVVP 240 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 +H WLPDAH+QAPTAGSVDLAGILLKTAAYGLLRF+LPLFPNASAEFAPIA WLGV I Sbjct: 241 VHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAPIAQWLGVFAII 300 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 YGA ++FAQTDIKRL+AY+SVSHMGFVLIAIY+GSQ+A QGAV+QM+AHGLSAA LFILC Sbjct: 301 YGALLSFAQTDIKRLVAYSSVSHMGFVLIAIYSGSQIALQGAVVQMVAHGLSAAALFILC 360 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP 419 GQLYER+HTRD+R MGG+W++M WLPA+SLFFA A LG+PGTGNFVGEF+IL GSF P Sbjct: 361 GQLYERLHTRDLRQMGGIWARMPWLPAISLFFAAAALGLPGTGNFVGEFLILIGSFPGAP 420 Query: 420 VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLG 479 + VI+ GLV SVY+LAM+HRAYFG + LPG+ REL M+L L VLL+LLG Sbjct: 421 WVVVIAATGLVLGSVYALAMIHRAYFGPVQQDAP---LPGLKPRELSMVLGLAVLLILLG 477 Query: 480 FYPQPILDTSHSAIGNIQQWFVNSVTTT 507 YPQP+LDTS +++ +QQW +++ Sbjct: 478 VYPQPVLDTSAASMHGVQQWMADALNQL 505 >UniRef50_A3ZKZ8 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZKZ8_9PLAN Length = 609 Score = 422 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 177/569 (31%), Positives = 278/569 (48%), Gaps = 69/569 (12%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQ-LWLQGGYSLTQSAGIP 61 + LI P L V R+ L+ + + L + L +++ Sbjct: 1 MSALIFFPLAAAALISLIPGDQKNVIRFTTLLATLVMFGVVLFGMALPTNETISFDIETA 60 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q+ +PWIP F I L DG+S +VVLT L+ LA+ SW IEK+ + + + Sbjct: 61 GMQNVVSLPWIPSFNIDYFLGFDGISFPLVVLTALISALAMGASWT-IEKHVKGYCVLYL 119 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 +L G++GVF+++D FLF+ FWE+ML+PMYFLI +WG G + AA KFF+YT Sbjct: 120 ILLTGMMGVFVSLDFFLFYIFWEVMLLPMYFLIGVWG-----GPRKEYAAIKFFLYTLFG 174 Query: 182 GLVMLIAILALVF-----------------------------------------VHYNAT 200 ++ML+AIL + F + T Sbjct: 175 SVLMLVAILMIYFNSDLRQLSPQQLVDSNVRLAGVEHLGAVDEHLAAATKYHETISAAET 234 Query: 201 GVWTFNYEELLNTP-----------MSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHS 249 V TFN L +++ + FI FA+K+P VP H WLPDAH Sbjct: 235 PVHTFNLLALQQLGQHSEVFDKELLFGKSLQWWAFVLLFIGFAIKVPSVPFHTWLPDAHV 294 Query: 250 QAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQT 309 +APT S+ LAG+LLK YG++R P+ P+A + A + +GVI + YGA+ A AQT Sbjct: 295 EAPTPISMILAGVLLKMGGYGIIRICYPICPDAGYDLAWVVCSIGVISMIYGAFAALAQT 354 Query: 310 DIKRLIAYTSVSHMGFVLIAIYTGSQ----------LAYQGAVIQMIAHGLSAAGLFILC 359 D KR++AY+SVSHMG+V++ + S + +GA+ QMI HG+S+AG+F + Sbjct: 355 DFKRMVAYSSVSHMGYVVLGLGVWSATVVGDPVAWNMGVKGAMFQMIGHGISSAGMFFMV 414 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP 419 G +Y+R+H R++ GGL+ KM ++++ A LG+PG F+GE ++ ++ Sbjct: 415 GVIYDRVHHRNLNEFGGLFGKMPVYTSMAIIVFFAGLGLPGLCGFIGEAFVVLSVWKFSA 474 Query: 420 VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLG 479 + V F ++ + Y L + R Y G ++ L +++RE+ + + L VL +L G Sbjct: 475 GLAVAGAFVVILTAGYILWAVQRVYLGAEYKGPHAEALTEINIREMAIAVPLCVLAILFG 534 Query: 480 FYPQPILDTSHSAIGNIQQWFVNSVTTTR 508 P + + I Q T+ Sbjct: 535 VLPHTVFRYMDATIDQQVQDLATWTKETK 563 >UniRef50_D2R5F8 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5F8_9PLAN Length = 600 Score = 421 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 187/555 (33%), Positives = 271/555 (48%), Gaps = 55/555 (9%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 L + +P G L W G R+ AL TL + + + A Sbjct: 4 LFITTVFLPLAGAILMWILAPLGKNAVRFGALGVTLATLVCTAIVVASFPADGAKGAEFC 63 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 + I LA+DGL L M L+ LL V AVL SW+ I++ + F L+ Sbjct: 64 TVDWPWLAQSGSLLDIRFSLALDGLGLWMFGLSALLMVTAVLVSWEAIKEREALFFGMLL 123 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + G +GVF A D+ LF+ F+E L+P++FLI +WG + R AA+KFF+YT A Sbjct: 124 LLEFGCLGVFTARDLILFYVFFEFTLIPLFFLIGIWGS-----EDRKYAASKFFLYTLAG 178 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYE------ELLNTPMSSGVEYLLMLGFFIAFAVKM 235 L+ + +L +V Y GV + L + P+ + + + F FA+K+ Sbjct: 179 SLLTFLGLLVIVVWCYQQEGVGKLVFSIPELTATLRDAPLPPAWQLAVFIALFAGFAIKV 238 Query: 236 PVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGV 295 P+ PLH WLP AH QAPTAGSV LAG+LLK YG LRFS+P+ P+A+ P +WL V Sbjct: 239 PLFPLHTWLPLAHVQAPTAGSVILAGVLLKIGVYGFLRFSVPMLPDATVTCMPYLLWLSV 298 Query: 296 IGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGL 355 IGI YGA +A AQ D+KRLIAY+SVSH+G+ + ++ + L QG+V+QM+ HGLS GL Sbjct: 299 IGIIYGALVALAQGDMKRLIAYSSVSHLGYCTLGLFALNPLGVQGSVLQMVNHGLSTGGL 358 Query: 356 FILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSF 415 F + G LYER HTR+++ +GGL + WL L F +++G+PG F GEFMIL G F Sbjct: 359 FAVIGMLYERYHTREIKQLGGLARQTPWLSFFMLIFTFSSIGLPGLNGFPGEFMILLGMF 418 Query: 416 QVVPV------------ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQE------- 456 Q I V++ G+V + Y L ++ +FG K Sbjct: 419 QRAWAQSSVENFSQLMTIAVLAVTGVVLGAWYMLWLVQHVFFGPLKEPADDHGHAPVAVA 478 Query: 457 -------------------------LPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHS 491 +P + RE F + L V ++ +G P L Sbjct: 479 ASQGHDSHSHNGHGHGHDDHGTGSTVPDLKWREFFALAPLCVFVLWIGLRPGDFLSRMQP 538 Query: 492 AIGNIQQWFVNSVTT 506 + Q + + + Sbjct: 539 TLTQATQLASDKLAS 553 >UniRef50_Q2IN04 Proton-translocating NADH-quinone oxidoreductase, chain M n=6 Tax=Bacteria RepID=Q2IN04_ANADE Length = 542 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 196/507 (38%), Positives = 299/507 (58%), Gaps = 20/507 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL + +P +G R R +AL+ +T ALSL LW S G P Sbjct: 3 LLTVVTFLPLLGALAMVLVPRDEPSQHRALALVVSLVTFALSLGLWFGFDA----SPGAP 58 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 ++Q E +PW+P GI H+ +DG++LL+ +LT +L + VL +WK + F + L+ Sbjct: 59 EFQFELMIPWMPTIGIGFHVGLDGVALLLFMLTTVLMPVVVLSAWKAVGDRVKEFMIALL 118 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + ++G F+A+D+ LF+ FWE ML+PMY LI +WG + R+ A KFF+YT A+ Sbjct: 119 VLESAMLGTFIALDLVLFYVFWEAMLIPMYLLIGIWGSQ-----NRLYATVKFFVYTFAA 173 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELL-NTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 ++ML+AIL + F TF+Y E ++ G L L F +AFAVK+P+ PL Sbjct: 174 SVLMLLAILYVYFHDG-----GTFDYVEARRALAVTPGAASWLFLAFALAFAVKVPMFPL 228 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H WLPDAH++APTAGSV LAG+LLK +G R++LPLFP A+ + + L VIGI Y Sbjct: 229 HTWLPDAHTEAPTAGSVILAGVLLKMGTFGFFRYALPLFPEAALQHRNLVAVLAVIGIIY 288 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 GA M+ QTD+KRL+AY+SVSH+GFV++ + S G+V QM+ HG+S LF+L G Sbjct: 289 GALMSLVQTDMKRLVAYSSVSHLGFVMLGLMALSAEGMTGSVYQMLNHGVSTGALFLLVG 348 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSF----Q 416 LYER HTR + GG+ ++ + A + ++++G+PGT FVGEF+IL G++ Sbjct: 349 MLYERRHTRLISEYGGIAKRVPVIAAAFVIVTLSSIGLPGTNGFVGEFLILSGTWLSRLG 408 Query: 417 VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLV 476 V ++ G++ +VY L ++ + +FG A+ LP +S+RE F++ ++ L+V Sbjct: 409 GSAVFATVAALGVILGAVYMLLLVEKVFFG-PNQNAANHHLPDLSVREGFVLAPMIALIV 467 Query: 477 LLGFYPQPILDTSHSAIGNIQQWFVNS 503 ++G P P L + A+ + Q F + Sbjct: 468 VMGLLPGPFLAPAKPAVDRLIQRFQVA 494 >UniRef50_Q6MGN7 NADH dehydrogenase I chain M n=3 Tax=Bacteria RepID=Q6MGN7_BDEBA Length = 517 Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats. Identities = 180/515 (34%), Positives = 284/515 (55%), Gaps = 21/515 (4%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 M+L ++ +P + L + R +AL + +SL L+ S T Sbjct: 1 MILSSIVFLPLLFALLVAIWPKAN--TVRHLALGLSVIEFIVSLSLFKNFDASAT----- 53 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 Q WI RFGI + IDG+SL +V+LT L + +L SW I + FH+ + Sbjct: 54 -GLQMVEKFMWIERFGIQYFMGIDGISLWLVLLTTFLTPIIILASWTSITERVKGFHVCM 112 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + ++G FLA+D F+ FWE+ LVPMYF++ +WG G RI A KFFIYT A Sbjct: 113 FILQTAMLGTFLAMDAVFFYVFWELSLVPMYFMVGIWG-----GARRIYATVKFFIYTMA 167 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSS------GVEYLLMLGFFIAFAVK 234 ++ML+AI+ ++++ ATG + + + + ++ LL F +AFA+K Sbjct: 168 GSVLMLVAIIYMMYLTQEATGQMSASLLDFYQLQIPFVGGTFFSLQTLLFFAFALAFAIK 227 Query: 235 MPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLG 294 +P P+H WLPDAH +APT GSV LAG++LK YG +R+ +PLFP AS +A + M +G Sbjct: 228 VPAFPVHTWLPDAHVEAPTPGSVILAGVMLKMGTYGFMRWVIPLFPEASEYWAWLFMLIG 287 Query: 295 VIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAG 354 +GI YGA +A Q D+K+L+AY+SVSHMG++L+ ++ + G + QM+ HG+S Sbjct: 288 TVGIIYGALVAMVQPDVKKLVAYSSVSHMGYILLGLFAFNAYGMGGGLYQMLNHGISTGA 347 Query: 355 LFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGS 414 LFIL G +YER H+R++ GGL + ++++ +P T FVGEF IL G+ Sbjct: 348 LFILIGMIYERTHSREISKYGGLAGVLPIFTIFFFIITLSSIAVPMTNGFVGEFFILLGT 407 Query: 415 FQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKS--QIASQELPGMSLRELFMILLLV 472 +Q PV + G+V +VY L M R +FG+ + L ++ RE+ +++ LV Sbjct: 408 YQAHPVFAYFAVSGVVLGAVYMLWMFKRVFFGEQGELVKDEHHPLHDLNAREITVLVPLV 467 Query: 473 VLLVLLGFYPQPILDTSHSAIGNIQQWFVNSVTTT 507 +++ +G +P L+ S ++I ++ N T Sbjct: 468 IMVFWMGLFPNHFLNFSKASIDHLVNNRSNYNLTI 502 >UniRef50_B1ZA34 Proton-translocating NADH-quinone oxidoreductase, chain M n=159 Tax=cellular organisms RepID=B1ZA34_METPB Length = 527 Score = 412 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 185/501 (36%), Positives = 279/501 (55%), Gaps = 22/501 (4%) Query: 8 LIPFIGGFLCWQTERFG---VKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQ 64 ++P G + RW ALIT +T LSL W + P +Q Sbjct: 12 IVPLAGAAFILTLGEETAAVKRNARWAALITTVVTFLLSLVAWARYD------IASPSFQ 65 Query: 65 SEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWIL 124 W+ I L +DG S+ +++LT L + SW +E + + + + Sbjct: 66 LVESHAWLAE-TIRFKLGVDGFSMPLILLTTFLMPFCIGASWLSVENRVKEYFVAFLVLE 124 Query: 125 GGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLV 184 +IGVF A+D+ LF+ F+E L+PM+ +I +WG GK RI A+ KFF+YT ++ Sbjct: 125 TTMIGVFCALDLVLFYLFFEAGLIPMFLIIGIWG-----GKRRIYASFKFFLYTLLGSVL 179 Query: 185 MLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWL 244 ML+AI+A+ + T + LL G+++ L L FF +FAVKMP+ P+H WL Sbjct: 180 MLLAIMAMYWE------AGTTDIPTLLAHRFPVGLQWWLWLAFFASFAVKMPMWPVHTWL 233 Query: 245 PDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWM 304 PDAH +APTAGSV LAGILLK YG +R SLP+ P+ASA FAP+ L VI I + + Sbjct: 234 PDAHVEAPTAGSVILAGILLKMGGYGFIRISLPMLPDASASFAPLVFALSVIAIIFTSLT 293 Query: 305 AFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYE 364 A QTDIK+LIAY+SV+HMGFV + ++T ++ QGA+ MI+HG+ + LF+ G +Y+ Sbjct: 294 AMMQTDIKKLIAYSSVAHMGFVTLGLFTLNEQGIQGALFLMISHGIVSGALFLCVGVVYD 353 Query: 365 RIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVI 424 R+HTR++ GGL +M A + F +A +G+PGT FVGEF+ + G+F+ P + Sbjct: 354 RMHTREIAAYGGLVKRMPLYAAAMMVFTMANVGLPGTSGFVGEFLAMMGAFRANPTVAFF 413 Query: 425 STFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQP 484 S FG++ ++ Y+L + R +GK Q + + RE +I LV L + G +P P Sbjct: 414 SVFGIILSAGYALWLYARVIYGKLDKPNL-QGILDLDNREKIIIAPLVALTIWYGVHPAP 472 Query: 485 ILDTSHSAIGNIQQWFVNSVT 505 +LDT + + Q ++ Sbjct: 473 VLDTFAPSTEALMQNMRAALA 493 >UniRef50_Q02CT2 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02CT2_SOLUE Length = 518 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 183/495 (36%), Positives = 274/495 (55%), Gaps = 13/495 (2%) Query: 12 IGGFLCWQTERF-GVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMP 70 G + R + R AL+ A SL L L+ Q D+P Sbjct: 13 AGFLVALAIPRSVSAQGSRMWALLCSLGIFAASLGLLAWFDRGLS------GEQFAIDVP 66 Query: 71 WIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGV 130 WI I ++ +G+S+ +V+L+ LL L VL SW I F+ L+ + G++GV Sbjct: 67 WISSPNIHFAISANGVSIWLVLLSTLLTPLCVLVSWNSIHDRTKEFYAFLLLLEFGLVGV 126 Query: 131 FLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAIL 190 FLA D+FLF+ FWE+ LVPMYF+I +WGH RI AA KFF+YT A ++ML AI+ Sbjct: 127 FLAQDLFLFYVFWEIALVPMYFMIGIWGH-----DRRIYAAVKFFLYTMAGSVLMLAAII 181 Query: 191 ALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQ 250 + + G + LL L FF+AFA+K+P+ PLH WLPDAH + Sbjct: 182 YIYNKTQTFSYPAILEMLSNGRLSFPPGEQMLLFLAFFLAFAIKVPLFPLHTWLPDAHVE 241 Query: 251 APTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTD 310 APTAGS+ LA ++LK YG+L F LP+FP+A+ AP L +IGI YGA +A Q + Sbjct: 242 APTAGSIMLASVMLKMGTYGILHFCLPMFPSAARACAPWITVLAIIGIIYGALVAMVQPN 301 Query: 311 IKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRD 370 +K+L+AY+SVSH+GFV++ I+T +Q GAV QM+ HG+S LF++ G LYER H+ + Sbjct: 302 MKKLVAYSSVSHLGFVVLGIFTFTQPGLDGAVYQMLNHGISTGALFLVVGLLYERNHSLE 361 Query: 371 MRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLV 430 + GG+ + WL L +A++G+P NFVGEF++L G+ V ++ G++ Sbjct: 362 INSYGGVATVAPWLSVAFLITTLASVGLPTLNNFVGEFLVLQGAAIANFPWAVWASIGVI 421 Query: 431 FASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSH 490 ++ Y L M R ++G+ + + P ++LRE IL L+ ++V +G + Q L Sbjct: 422 LSACYMLWMYQRVFYGEVNPHV-REHTPDLNLREWAAILPLIAMMVWMGVFSQSFLPPVS 480 Query: 491 SAIGNIQQWFVNSVT 505 I + +V+ Sbjct: 481 QNTARILKQTNVNVS 495 >UniRef50_Q1NQL7 Proton-translocating NADH-quinone oxidoreductase, chain M n=4 Tax=Bacteria RepID=Q1NQL7_9DELT Length = 507 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 189/501 (37%), Positives = 284/501 (56%), Gaps = 18/501 (3%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L L+ +P +G + G R ALI +T +S+ L+ S Sbjct: 13 LSALVFLPLLGALVMLALP--GDNACRNWALIVTVITACVSMPLFFLFDRSTHL------ 64 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMW 122 +Q WI + I+ L IDG+SLL+V++T L+ L VL SW+ I+K F + L+ Sbjct: 65 YQFGEHHTWIEAWNINYTLGIDGISLLLVLMTTLIMPLCVLGSWRYIQKRVKEFMICLLL 124 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 + ++GVF+A+D LF+ FWE ML+PMY LIA+WG G R+ A+ KFF+YT A Sbjct: 125 METAMLGVFMALDFVLFYIFWEAMLIPMYLLIAVWG-----GPRRMYASIKFFLYTLAGS 179 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 +++L+AI+AL + TF+ L+ S+ + + L FF+AFA+K+P+ P H Sbjct: 180 VMLLVAIIALFL----TSEPQTFSIPLLMEQSYSTTFQIWVFLAFFLAFAIKVPMFPFHT 235 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGA 302 WLP AH +APTAGSV LA +LLK YG LRF LP+ P A+ F P +WL +IGI YG Sbjct: 236 WLPAAHVEAPTAGSVILASVLLKMGTYGFLRFCLPITPEATHIFMPYILWLSIIGILYGG 295 Query: 303 WMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQL 362 + A AQ D+K+LIAY+SV HMGFV + I+ + QGA++QMI HG++ LF G L Sbjct: 296 FTALAQQDMKKLIAYSSVGHMGFVTLGIFVLNSQGIQGAILQMINHGITTGALFFCVGML 355 Query: 363 YERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVIT 422 YER H+R++ + G+ M FFA+++L PGT +F+GEFMIL GSF +I Sbjct: 356 YERTHSRELALNAGVGRFMPIYVLFLGFFALSSLAFPGTNSFIGEFMILAGSFSYSIIIA 415 Query: 423 VISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYP 482 + G V A+ Y +L R +G + + L ++LRE+ ++ L++ + +G P Sbjct: 416 AFAIPGAVLAAAYMFRLLQRVVWGGTDNP-EHRGLLDLNLREVVVLAPLLLFVFWIGLSP 474 Query: 483 QPILDTSHSAIGNIQQWFVNS 503 P L+ ++ ++ + Sbjct: 475 APFLEVMEVSVAHLLTQVGAT 495 >UniRef50_A9B6Y1 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B6Y1_HERA2 Length = 517 Score = 410 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 191/518 (36%), Positives = 287/518 (55%), Gaps = 26/518 (5%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L ++ +P +G + R R AL L A+SL + + Sbjct: 11 ILSLVVFLPAVGAIILAFM-RGQRGAARIFALGWSTLVFAVSLPILFNFKHD------AA 63 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q WIP +G+ L +DG+SL +V+LT + LA+ +W +E+ F + ++ Sbjct: 64 GLQFYEYFNWIPDWGVRYELGLDGISLWLVLLTTFVTPLAIWSAWN-VEEKTNNFLMLIL 122 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 G++GVFLA D+FLF+ FWE L+PMYFLI +WG GK RI A KFF+YT A+ Sbjct: 123 LQEMGMLGVFLAQDLFLFYIFWEFTLIPMYFLIGMWG-----GKRRIYATVKFFLYTFAA 177 Query: 182 GLVMLIAILALVFVHY----------NATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAF 231 + MLI I+AL ++Y + + +S LL L FF+AF Sbjct: 178 SVFMLIGIIALGLLNYKYLAQQGLPTDTAFQVQTLMANINQFGLSDTELKLLFLSFFVAF 237 Query: 232 AVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAM 291 AVK+P+ P+H WLPDAH +APTAGSV LA +LLK YG++RF + LFP + E+A Sbjct: 238 AVKVPLWPVHTWLPDAHVEAPTAGSVILAAVLLKMGGYGMIRFCVQLFPQIAQEWARPIA 297 Query: 292 WLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLS 351 L VIGI YGA +++AQ+DIK+L+AY+SVSHMGF+++ I+ +++ QGAV+QMI HGLS Sbjct: 298 LLAVIGIIYGAVLSYAQSDIKKLVAYSSVSHMGFIVLGIFALNEVGLQGAVLQMINHGLS 357 Query: 352 AAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMIL 411 LF+L G +YER HTR++ GGLW + LF +A++G+PG FVGEF+I+ Sbjct: 358 TGALFLLIGMVYERTHTRELADYGGLWKVVPVFVYFLLFATMASVGLPGLNGFVGEFLIM 417 Query: 412 FGSFQV--VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMIL 469 G+F T + G++ A+VY L M G + L ++ RE+ ++L Sbjct: 418 LGAFDSPIGWTFTAFAAVGVILAAVYLLKMFQGIASGPFSERRTP-HLSDLTRREVAILL 476 Query: 470 LLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNSVTTT 507 L +L++++G Y + I ++ + N+ Sbjct: 477 PLCILMLVIGLYSSYFTRPMETTIKALEAFVANAAPLI 514 >UniRef50_B5YKJ1 NADH-quinone oxidoreductase chain m n=15 Tax=cellular organisms RepID=B5YKJ1_THEYD Length = 538 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 190/509 (37%), Positives = 292/509 (57%), Gaps = 19/509 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L LI P G L R ++ ++ ALI + S+ L++ + +Q Sbjct: 47 ILSTLIFFPVAGAALIAIIPRDKEELIKFSALIISIVEFIFSIPLYISFNKTTSQ----- 101 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q + + WIP +GI +L +DG+S+L ++L+ LL +L V SWKEI++ F+ L+ Sbjct: 102 -MQFKEEHLWIPEWGIKYYLGVDGISILFILLSSLLTILCVTVSWKEIDRKIKEFYAALL 160 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 +IGVF+++D+FLF+ FWE ML+PMY +I +WG G RI +A KFF+YT Sbjct: 161 ITHSAMIGVFMSLDIFLFYIFWEAMLIPMYLIIGIWG-----GPRRIYSAIKFFLYTFIG 215 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 ++ML+ IL L F T + L+ ++ L FF AFAVK+P+ P+H Sbjct: 216 SVLMLVGILVLYF------HTGTSDILSLMKNSYPYKMQLWLFWAFFAAFAVKVPMWPVH 269 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLPDAH++APTAGSV LAG+L+K AYG LRF+LP+FP A+ P M L VI I YG Sbjct: 270 TWLPDAHTEAPTAGSVILAGVLIKMGAYGFLRFNLPMFPEATLAMKPFMMILSVIAIIYG 329 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 A + Q D+KRLIAY+SVSHMGFV + I+ +Q QG +IQM+ HG+ LF+ G Sbjct: 330 ALICLIQKDLKRLIAYSSVSHMGFVTLGIFALNQQGIQGGIIQMLNHGVVTGALFLCIGI 389 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 +Y+R HTR + GG+ + M A + F +A++G+PGT F+GEF+IL G+F+ ++ Sbjct: 390 VYQRTHTRQIAHYGGVATVMPAYSAFFMIFTLASIGLPGTNGFIGEFLILLGTFKAWKLM 449 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIAS--QELPGMSLRELFMILLLVVLLVLLG 479 +++ L+ + Y L + R +F K + ++ RE+ +L LV++++ +G Sbjct: 450 CILAATALIIGAAYMLWLYQRVFFEKTNPEFLQHIHGYSDLNSREIVTLLPLVLVVLWIG 509 Query: 480 FYPQPILDTSHSAIGNIQQWFVNSVTTTR 508 FYP +L ++ + SV + Sbjct: 510 FYPNALLSFMDVSVKELINHVTQSVGAMK 538 >UniRef50_B0BZT1 Proton-translocating NAD(P)H-quinone oxidoreductase, chain M n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0BZT1_ACAM1 Length = 490 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 189/504 (37%), Positives = 292/504 (57%), Gaps = 18/504 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL +I P +G + + + +WI+L M + AL+ +LQ + T Sbjct: 5 LLSLIIFSPLVGAVIILLLPKAQESLYKWISLANMVVVSALTFAAFLQFDPNQT------ 58 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 +Q WIP+ + L DG+S MVVLT L+ LA + S+ I+K + ++ + Sbjct: 59 GFQLVEKTLWIPQLNVYYLLGTDGISFPMVVLTALISTLASIGSFS-IKKREKEYYCLYL 117 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 +++ G++G FLA+DM LF+ FWE++LVPMYFLI +WG G + AA KFF+YT A Sbjct: 118 FLVTGMMGTFLALDMILFYVFWEVVLVPMYFLIGIWG-----GPRKEYAAMKFFLYTFAG 172 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 L+ML+ IL + F + TFN EL+ S G + ++ L F+ FAVK+P P H Sbjct: 173 SLLMLVGILGMYF----NSAPHTFNIMELVAQDFSFGFQKIVFLALFVGFAVKVPTFPFH 228 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLPDAH +APT SV LAG+LLK YG RFS P+ P A+ F P L IGI YG Sbjct: 229 TWLPDAHVEAPTPISVILAGVLLKMGTYGFFRFSFPILPEAANWFRPYLAVLAAIGIVYG 288 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 ++A AQTD K+++AY+S+SHMGFVL+ + S + GA++QM +HG+ LF+L G Sbjct: 289 GFIALAQTDFKKMVAYSSISHMGFVLLGLAAFSTNGFNGAMLQMFSHGVITGALFLLVGV 348 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 +Y+R HTRDM GGL +++ +FF++A+LG+PG FV EF++L GS++ + Sbjct: 349 IYDRAHTRDMNAFGGLNAQLPVYSGFLVFFSLASLGLPGLSGFVSEFLVLLGSYEYSKLY 408 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 T + G++ A+ Y L M+ R G A + S LP +++RE+ ++ L+++ + +G Y Sbjct: 409 TAFACMGILLAACYLLFMVRRVLLGPANPKWES--LPDINMREVVTVVPLLIITLGIGIY 466 Query: 482 PQPILDTSHSAIGNIQQWFVNSVT 505 P+ +L + ++ ++ Sbjct: 467 PRYLLSFFIPTLQDLLASIGGTLM 490 >UniRef50_B1KJV9 Proton-translocating NADH-quinone oxidoreductase, chain M n=2 Tax=Shewanella RepID=B1KJV9_SHEWM Length = 537 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 231/541 (42%), Positives = 344/541 (63%), Gaps = 42/541 (7%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 M+L L+++P IGGFL ++R P+WIA I +TLA + + + + Sbjct: 1 MMLLTLVILPLIGGFLACWSQRVHQDAPKWIAAICTLVTLAFLISI-----KLASNIEDL 55 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 W + WIPR I+ HLA+DGLS ++++LT L+G++ + +W EI +++GFF+ N Sbjct: 56 ELWLVDEPRAWIPRLNITAHLAMDGLSFVLLLLTLLMGLVGLSSAWSEINQHRGFFYGNY 115 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 +W L G+IGVFLA+D+ LFF FWE+MLVPMYFLIA+WG + R AA KFF++TQA Sbjct: 116 LWTLAGIIGVFLAMDLLLFFVFWEVMLVPMYFLIAIWG-----NENRRYAALKFFLFTQA 170 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 GL+ML++I+AL +HY TG+ +F+Y+ L+ +P+ S + + LGF IAF VK+P P Sbjct: 171 GGLLMLLSIIALTVIHYQQTGILSFDYQVLVQSPIQSELAKWICLGFIIAFIVKLPAFPF 230 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H WLPDAH+QAPT S+ LA +LLKT YGLLRF LPLFP ++ +AP+ M L + I Y Sbjct: 231 HTWLPDAHTQAPTPASIILAAVLLKTGGYGLLRFVLPLFPESAQFWAPLMMALAGVSIIY 290 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 GA MAF+QTD+KRL+AY+SVSHMGFVL+ ++ + A QGAV+QM+AHGLS + LF+L G Sbjct: 291 GAIMAFSQTDLKRLVAYSSVSHMGFVLLGCFSFNFYALQGAVMQMLAHGLSTSALFMLVG 350 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 + R HTRD+ +GGLW + L A+ LFF VA+LGMPG GNF+ E ++L G+F+ P+ Sbjct: 351 LIQHRFHTRDLNHLGGLWHTLPKLSAMGLFFGVASLGMPGMGNFIAELLVLLGTFKQAPI 410 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFG--------------------------------KA 448 ++++ GL+ A+VYSL M+ +++FG K Sbjct: 411 FAIVASSGLILAAVYSLRMIQKSFFGMNLKLETSLSDEKSSDNSSRDGIDNSSADLGAKH 470 Query: 449 KSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNSVTTTR 508 S ++ + +S++E ++L+ + L+++G +PQPI +S++ I + + Sbjct: 471 HSDAHTRYVTDLSVKEGLTLMLMCLGLIVMGLHPQPIFTLVNSSLMEILSLIQSPLQPES 530 Query: 509 P 509 P Sbjct: 531 P 531 >UniRef50_P93313 NADH-ubiquinone oxidoreductase chain 4 n=140 Tax=cellular organisms RepID=NU4M_ARATH Length = 495 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 177/497 (35%), Positives = 278/497 (55%), Gaps = 17/497 (3%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L LIL P +G + +++ R I L +T SL LW+Q + + Sbjct: 12 LSGLILCPVLGSIILLFIPNSRIRLIRLIGLCASLITFLYSLVLWIQFD------SSTAK 65 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMW 122 +Q + W+P I+ +L IDG+SL V+LT L + +L W + Y + + + Sbjct: 66 FQFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYIIAFLI 125 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 +I VF +D+ LF+ F E +L+PM+ +I +WG + +I AA +FF+YT Sbjct: 126 CEFLMIAVFCMLDLLLFYVFPESVLIPMFIIIGVWGS----RQRKIKAAYQFFLYTLLGS 181 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 L ML+AIL ++F T + + LL T S + L + FF +FAVK+P+VP+H Sbjct: 182 LFMLLAILLILFQ------TGTTDLQILLTTEFSERRQIFLWIAFFASFAVKVPMVPVHI 235 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGA 302 WLP+AH +APTAGSV LAGILLK YG LRFS+P+FP A+ F P L I I Y + Sbjct: 236 WLPEAHVEAPTAGSVILAGILLKFGTYGFLRFSIPMFPEATLCFTPFIYTLSAIAIIYTS 295 Query: 303 WMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQL 362 Q D+K++IAY+SV+HM V I +++ + G+++ M++HGL ++ LF+ G L Sbjct: 296 LTTLRQIDLKKIIAYSSVAHMNLVTIGMFSPNIQGIGGSILLMLSHGLVSSALFLCVGVL 355 Query: 363 YERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVIT 422 Y+R TR +R GGL S M + F +A + +PGT +F+GEF+IL G+FQ ++ Sbjct: 356 YDRHKTRLVRYYGGLVSTMPNFSTIFFSFTLANMSLPGTSSFIGEFLILVGAFQRNSLVA 415 Query: 423 VISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYP 482 ++ G++ + YSL + +R G K + ++ RE+F+ + +V LV +G YP Sbjct: 416 TLAALGMILGAAYSLWLYNRVVSGNLKPDFL-HKFSDLNGREVFIFIPFLVGLVWMGVYP 474 Query: 483 QPILDTSHSAIGNIQQW 499 + LD H+++ N+ Q Sbjct: 475 KVFLDCMHTSVSNLVQH 491 >UniRef50_B0SFU4 NADH dehydrogenase (Ubiquinone), M chain n=6 Tax=Leptospira RepID=B0SFU4_LEPBA Length = 579 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 176/497 (35%), Positives = 274/497 (55%), Gaps = 14/497 (2%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L +I +P + FL +R G I+ ++ T LSL L+ S AG+ Sbjct: 5 ILSIIIFLPIVSTFLIVIQKRVG--AVVVISALSSAFTTILSLGLFFFYDAS---KAGLQ 59 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 D + + H+ +DG+SLL+ LT + L+ + SW I K FH+ L+ Sbjct: 60 FVHWIPDWILSGKLSVDYHVGLDGVSLLLFALTTFMFFLSSIASWSNIPKKIKEFHICLL 119 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + V+GVF + ++ LF+ FWE+M++PM +I +WG G+ R AA K+F+++ A Sbjct: 120 VLETAVLGVFASGNLVLFYVFWELMVLPMVLMIGIWG-----GEERTKAALKYFLFSMAG 174 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 L ML IL L F + + S +++ L FF+AFA+K+P+ P H Sbjct: 175 SLFMLGGILTLYFKTGKTSIE---SLSTASLALYSEPLQWFLFFSFFLAFAIKIPLFPFH 231 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 W+PD H+QAPT GSVDLAG+LLK AYG +RF +P FP S L VIGI YG Sbjct: 232 TWMPDVHTQAPTVGSVDLAGVLLKIGAYGFIRFCIPFFPEQSLLSQNGIQILAVIGIVYG 291 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 + A QTDIKR+IAY+S+SH+GF ++ I++ + G ++QM++HG+S +F++ G Sbjct: 292 SMAALVQTDIKRIIAYSSLSHLGFCILGIFSFTTEGVVGGMLQMVSHGISTGMIFLMIGM 351 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 +YER HTR++ GGL +M L ++++G+PGT FVGEF+IL G+ + + Sbjct: 352 IYERAHTRNISEFGGLAGQMPVFSTFFLIAVLSSIGLPGTNGFVGEFLILIGAIKSNVWL 411 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 I+ G+V ++Y L + R FG I ++ +S RE+ ++ LVVL+ +G Y Sbjct: 412 GGIAATGVVLGALYLLWFVKRFLFG-VSKTIQAKPYKDLSFREIGILSPLVVLIFWIGLY 470 Query: 482 PQPILDTSHSAIGNIQQ 498 P+P L +S+ Sbjct: 471 PKPFLSILNSSSNVFLN 487 >UniRef50_Q2S2L1 NADH dehydrogenase i, m subunit n=7 Tax=Bacteria RepID=Q2S2L1_SALRD Length = 545 Score = 405 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 203/514 (39%), Positives = 302/514 (58%), Gaps = 17/514 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 L ++ +P G L R RW AL T +T LS+ L++ S++ + G Sbjct: 7 LTSLVVFLPAAGALLTLFLRRAS--AIRWTALATTTVTFVLSIGLFVGYDPSVSTALGPQ 64 Query: 62 QWQSEFDMPWIPR-FGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 ++ W+P + + + +DGLSLL+V+LT LLG + VL SW I + ++ L Sbjct: 65 --LADVWAGWLPDGYDVKYFVGVDGLSLLLVMLTTLLGPIVVLSSWTYIGEKHKGYYALL 122 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + + G+ GVF + D+ LF+ F+E+ L+PMYF+I +WG GK RI AA KF IYT Sbjct: 123 LLLQTGITGVFTSFDLLLFYIFFELTLIPMYFIIGIWG-----GKERIYAAVKFVIYTLV 177 Query: 181 SGLVMLIAILALVFVHYNA--TGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 L+ML+ IL L + +A GV+T ++ LL + V+ L F +FA+K+P+ Sbjct: 178 GSLLMLVGILYLGYAAGDAVNNGVFTTDWYTLLEYNIPLAVQGWLFAVFAFSFAIKVPLF 237 Query: 239 PLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 PLH WLPDAH QAPT GSV LAG+LLK YGLLRF LPLFPN + +A + + +IGI Sbjct: 238 PLHTWLPDAHVQAPTGGSVILAGVLLKMGTYGLLRFCLPLFPNVAQSYAGLFAVIAIIGI 297 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFIL 358 YGA +A Q D K L+AY+S+SH+GFV++ ++ + A QGA+IQM+ HGLS LF+L Sbjct: 298 IYGALVARVQDDAKSLVAYSSISHLGFVVLGLFAFTTEAMQGAMIQMVNHGLSTGALFLL 357 Query: 359 CGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV- 417 G LYER HTR M GGL + + L L + +A+ G+PG FVGEF+IL GSF+ Sbjct: 358 VGMLYERRHTRLMDDYGGLATSVPVLTTLMVISVLASAGLPGLNGFVGEFLILLGSFKST 417 Query: 418 ---VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVL 474 PV+ +T G++ A++Y L M++R +FG+ + A+ ++ ++ RE +++ L+VL Sbjct: 418 VIDSPVLIAFATTGVILAAMYLLHMVYRTFFGEL-TDAANAQMADLNAREFGLMVPLIVL 476 Query: 475 LVLLGFYPQPILDTSHSAIGNIQQWFVNSVTTTR 508 + +LGFYP P L + + + Sbjct: 477 MFVLGFYPGPFLRQTAPTTEFLLETVEEKRAAVE 510 >UniRef50_Q3BRP1 NADH-ubiquinone oxidoreductase NQO13 subunit n=10 Tax=Xanthomonas RepID=Q3BRP1_XANC5 Length = 500 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 181/516 (35%), Positives = 280/516 (54%), Gaps = 33/516 (6%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL LI +P IGG L + RW +L T ALSL L Sbjct: 6 LLSILIWLPIIGGALILALR--NAETARWASLAVAVATFALSLPLL-------GYDTAND 56 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q WIP + I +L +DG+++ ++VLT L+ VLA++ +W+ I+K + + Sbjct: 57 AMQFIELHTWIPAYNIGYNLGVDGIAVALIVLTTLVTVLALIGAWRSIDKRVNQYVAAFL 116 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + G +G+F A D LF+ F+E ML+PM+ +I +WG G RI AA KFF+YT Sbjct: 117 ILEGVTVGIFAATDAMLFYVFFEAMLIPMFLIIGVWG-----GPRRIYAAMKFFLYTFLG 171 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 ++ML+ ++ L +F +L +++ + + F IAFAVK+P+ P+H Sbjct: 172 SVLMLVGLVYLYLKGG------SFQLADLYALQLTAKEQTWIFFAFLIAFAVKVPMFPVH 225 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLPDAH +APTAGSV LA I LK YG LRF+LP+ P+AS EFA + + L +I + Y Sbjct: 226 TWLPDAHVEAPTAGSVILAAIALKIGGYGFLRFNLPIVPDASHEFAWLVITLSLIAVIYV 285 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYT------------GSQLAYQGAVIQMIAHG 349 +A Q D+K+L+AY+S++HMGFV + + ++L QGA++QMI+HG Sbjct: 286 GLVALVQDDMKKLVAYSSIAHMGFVTLGTFIAFTLVREYGSTDAARLGLQGAMVQMISHG 345 Query: 350 LSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFM 409 + +F G LY+R+HTR + GG+ + M W S+ F +A G+PGT FVGEFM Sbjct: 346 FVSGAMFSCIGVLYDRMHTRRIADYGGVVNVMPWFATFSMLFFMANAGLPGTSGFVGEFM 405 Query: 410 ILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMIL 469 ++ SFQ P++ + LV + Y+L + R +FG+ + EL ++ RE F++ Sbjct: 406 VILASFQKHPLVAFGAATTLVITAAYTLWLYKRVFFGEVAN-AHVAELKDINGREAFVLG 464 Query: 470 LLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNSVT 505 + ++ LG YP+P+ D +I + + Sbjct: 465 VFAAGVLALGLYPKPLTDLMEPSIAKLATQIAATKL 500 >UniRef50_D2U4G9 NADH-quinone oxidoreductase chain M n=1 Tax=Arsenophonus nasoniae RepID=D2U4G9_9ENTR Length = 506 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 334/509 (65%), Positives = 414/509 (81%), Gaps = 3/509 (0%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 MLLPWLIL+PFIGG LCWQ+ RF + PR++AL+ MGLTL LS+ LWLQG YSLT + + Sbjct: 1 MLLPWLILLPFIGGVLCWQSGRFNQRAPRYLALLVMGLTLLLSVLLWLQGNYSLTNTLAL 60 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 PQWQ+ F MPWI GI+I LAIDGLSLLM+VLT ++G+ +VL SW E + QG +H +L Sbjct: 61 PQWQAIFFMPWITPLGINIALAIDGLSLLMIVLTAIMGIFSVLSSWSENQPNQGAYHFHL 120 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 MWIL GV+G+FLA+D+FLFFFFWEMML+PMYFLIA WGHK S+ + + AATKFFIYTQA Sbjct: 121 MWILAGVMGIFLAVDLFLFFFFWEMMLIPMYFLIANWGHKGSEERAHVNAATKFFIYTQA 180 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 SGL+ML+AI+AL +HY ++G W+F Y +LLNT MS+ +YLLMLGFFIAFAVKMP+VP Sbjct: 181 SGLIMLVAIVALALIHYQSSGNWSFAYHDLLNTKMSALTQYLLMLGFFIAFAVKMPLVPF 240 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 HGW+ D Q+PTAGSVD++GI+LKTAAYGLLRF+LPLFP AS +F PIAM LGVI IFY Sbjct: 241 HGWMADTQEQSPTAGSVDISGIMLKTAAYGLLRFTLPLFPTASIQFTPIAMTLGVISIFY 300 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 GAW+AF QTDIKRL+AY+S+SHMGFV +AIY GS LAYQGAV+QMIA+GLS A L I+ G Sbjct: 301 GAWLAFKQTDIKRLVAYSSLSHMGFVTVAIYAGSTLAYQGAVLQMIANGLSGAALIIISG 360 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 QLYER TRDMRMMGGLW ++ WLPALSLFFAVATLGMPGTGNFVGEFMILFG+F + Sbjct: 361 QLYERTGTRDMRMMGGLWKRIMWLPALSLFFAVATLGMPGTGNFVGEFMILFGTFGQFKL 420 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 +T I FG+VFAS+Y+L M+ + Y+G AKS+ + LP ++ RE+ ++L L +LLV+LGF Sbjct: 421 VTTIMVFGVVFASIYALWMMQQVYYGSAKSE---KALPALNGREILVLLTLALLLVILGF 477 Query: 481 YPQPILDTSHSAIGNIQQWFVNSVTTTRP 509 YPQP+LDTS + + ++ + S +T RP Sbjct: 478 YPQPVLDTSKNVMESLHSLYSISFSTLRP 506 >UniRef50_C6BS86 Proton-translocating NADH-quinone oxidoreductase, chain M n=8 Tax=Bacteria RepID=C6BS86_DESAD Length = 511 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 178/495 (35%), Positives = 269/495 (54%), Gaps = 22/495 (4%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L L+ P + + + G R L + LALS L+ Sbjct: 8 VLTVLVFFPLLAAVGLFFLK--GDNTIRMYTLGVSIIELALSFPLFAGF------KLESA 59 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 +Q M W+ ++G+ +L DG+S LMVVLT + L VLCSW I+ FH L+ Sbjct: 60 AFQFVERMDWVKQWGVEYYLGTDGISFLMVVLTIAVLPLCVLCSWTYIQTRVKEFHFCLL 119 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 ++ +GVF A+D+ LF+ FWE ML+PMY LIA+WG G + A+ KFF+YT A Sbjct: 120 FMTAACVGVFTALDLVLFYVFWEAMLIPMYLLIAVWG-----GPEKRYASLKFFLYTLAG 174 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 ++L+AI+A TF EL+ + ++ L +AFA+K+P+ P H Sbjct: 175 SALLLVAIVAFRIAGG------TFAIPELMEQNFAFNFQFWAFLALALAFAIKVPMFPFH 228 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLP AH QAPTAGSV LA +LLK YG LRF+LPL P AS FAP + + + GI YG Sbjct: 229 TWLPAAHVQAPTAGSVILASVLLKMGTYGFLRFNLPLTPAASEYFAPFMIAISIAGILYG 288 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 +A Q DIK++IAY+SV HMGFV + I+ +Q +GA+ QM+ HG++ GLF++ G Sbjct: 289 GIVALGQNDIKKVIAYSSVGHMGFVTLGIFLFNQRGLEGALFQMLNHGITTGGLFMMIGA 348 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 +YER H+R++ GL M FA+++ G PGT +FVGE ++ G+F+ P I Sbjct: 349 VYERSHSRELDDNLGLGKYMPAYMFFWGLFALSSFGFPGTNSFVGEILVFVGAFEQNPWI 408 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 + G + A+ Y L + + +G+ S +E P ++LRE +++ V ++ +G Sbjct: 409 GALMVPGAMVAAAYMLRVSLKLAWGRPTS---WKEWPDLNLREWTYLVIPAVFVLYIGLA 465 Query: 482 PQPILDTSHSAIGNI 496 P +++ + Sbjct: 466 PGLCFKVMDASLIKL 480 >UniRef50_D2L5S8 Proton-translocating NADH-quinone oxidoreductase, chain M n=2 Tax=Bacteria RepID=D2L5S8_9DELT Length = 526 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 191/502 (38%), Positives = 260/502 (51%), Gaps = 20/502 (3%) Query: 6 LILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQS 65 LI++P I + R +TLA + L L+ S P +Q Sbjct: 13 LIVLPLIAALVLLVWRRDEWTTR--------VVTLATGILECLLALPLLSYSPSGPAFQF 64 Query: 66 EFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILG 125 W+P G++ HL +DGLSL MV+LT L+ L VL SW I K FH L+ + Sbjct: 65 VEKAQWLPAMGMTYHLGLDGLSLYMVLLTALMLPLCVLGSWTYISKRVTEFHFCLLLMTS 124 Query: 126 GVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVM 185 IGVF A+D LF+ FWE MLVPMY LIA+WG G R A+ KFF+YT A ++ Sbjct: 125 ACIGVFAALDFVLFYVFWEAMLVPMYLLIAVWG-----GPRRRYASIKFFLYTLAGSTLL 179 Query: 186 LIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLP 245 L AI+A V TF+ EL+ S + L +AFA+K+P+ P H WLP Sbjct: 180 LAAIVAFRQVGG------TFSIPELMEKSYSFKFQIWAFLAMALAFAIKVPMFPFHTWLP 233 Query: 246 DAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMA 305 AH +AP AGSV LA ILLK YG LRF LPL P AS API + + V I YG +A Sbjct: 234 AAHVEAPAAGSVLLAAILLKMGTYGFLRFCLPLTPAASVTAAPIMIAISVASILYGGCIA 293 Query: 306 FAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYER 365 QTDIK+LIAY+SV HMGFV + I+ S GA++QM+ HG++ GLF++ G LYER Sbjct: 294 LGQTDIKKLIAYSSVGHMGFVTLGIFLLSVKGVSGAILQMLNHGITTGGLFMMVGLLYER 353 Query: 366 IHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVIS 425 H+R++ GL M L F+ ++L PGT +FVGE ++L G+F P I + Sbjct: 354 SHSREIVDNQGLGKFMPAFMFLFGLFSFSSLAFPGTNSFVGEILVLIGAFAGNPWIGFAA 413 Query: 426 TFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPI 485 G + A+ Y L +L R +G+ S + +RE + L +L+ +G P Sbjct: 414 VPGAMLAAAYMLRLLQRVTWGEPSS-FKKGSWRDLGVREWLTLAPLALLVFYIGLAPALA 472 Query: 486 LDTSHSAIGNIQQWFVNSVTTT 507 + T +I Sbjct: 473 ITTIEPSIERTLSALHAKNQAM 494 >UniRef50_C4XGW9 NADH-quinone oxidoreductase chain M n=3 Tax=Desulfovibrionales RepID=C4XGW9_DESMR Length = 523 Score = 400 bits (1028), Expect = e-110, Method: Composition-based stats. Identities = 187/506 (36%), Positives = 268/506 (52%), Gaps = 22/506 (4%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 ++ LI++P + R TLA+ + L L P Sbjct: 8 VVTALIVVPLVAAVALLFMRRDW---------TVRMTTLAVGILECLLSLPLLGYVPDGP 58 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 +Q W+P G++ HL +DGLSL M++LT L+ L VL SW I K FH+ L+ Sbjct: 59 AFQFVEKADWLPALGMTYHLGVDGLSLYMILLTALMLPLCVLGSWTYIAKRVTEFHVCLL 118 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + IGVF A+D LF+ FWE MLVPMY LIA+WG G R A+ KFF+YT A Sbjct: 119 LMTASCIGVFAALDFVLFYVFWEAMLVPMYLLIAVWG-----GPRRRYASIKFFLYTLAG 173 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 ++L AI+A V TF+ EL+ + ++ L +AFA+K+P+ P H Sbjct: 174 STLLLAAIVAFRQVGG------TFSIPELMEKSYAFKFQFWAFLAMALAFAIKVPMFPFH 227 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLP AH +AP AGSV LA ILLK YG LRF LPL P A+ FAP+ + + + GI YG Sbjct: 228 TWLPAAHVEAPAAGSVLLAAILLKMGTYGFLRFCLPLTPAAAETFAPLLIAVSIAGIIYG 287 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 +A QTDIK+LIAY+SV HMGFV + I+ S GA++QM+ HG++ GLF++ G Sbjct: 288 GCIALGQTDIKKLIAYSSVGHMGFVTLGIFLFSVKGVSGAILQMLNHGITTGGLFMMIGL 347 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 LYER H+R++ GL M L F++++L PGT +F+GE ++L G+FQ P + Sbjct: 348 LYERSHSREIADNQGLGKFMPAFMFLFGVFSLSSLAFPGTNSFIGEVLVLIGAFQGNPWV 407 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 + G + A+ Y L +L R +G+ + S + LRE + L +L+ +G Sbjct: 408 GFAAVPGAMLAAAYMLRLLQRVTWGEPAAYKPSWG--DLGLREWVTLAPLGILVFYIGLA 465 Query: 482 PQPILDTSHSAIGNIQQWFVNSVTTT 507 P + T +I + T Sbjct: 466 PALCIKTIEPSITRVLSAMEAKNTAM 491 >UniRef50_A6FCN8 NuoM2 NADH-Ubiquinone/plastoquinone (Complex I) oxidoreductase n=2 Tax=Proteobacteria RepID=A6FCN8_9GAMM Length = 500 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 189/502 (37%), Positives = 280/502 (55%), Gaps = 19/502 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L LI +P I L G K RW + + ++ L + S Sbjct: 16 ILSILIFLPAIAALLVPFL--SGNKTVRWFTFTVLFVDFLIATWLLVIFDNS------TA 67 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q Q PW+P GI+ L +DG+S+L + LT LLG + VL SW I K F + L+ Sbjct: 68 QMQFVESKPWVPSLGITYKLGVDGVSVLFLFLTSLLGWICVLASWTAIAKRIKEFMICLL 127 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 I ++GVF A+D+ LF+ FWE MLVPMY +I +WG G+ RI AA KFF+YT A Sbjct: 128 AIQSLMLGVFCALDLLLFYVFWEAMLVPMYLMIGIWG-----GEDRIYAAFKFFLYTLAG 182 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 L+ L+ IL L F G TF+ L++ ++ + + F IAFAVK+P+VP H Sbjct: 183 SLIFLVGILVLYF-----AGGRTFDILTLMDVSYDFELQRGVFIAFLIAFAVKVPMVPFH 237 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLPDAH QAPTAGS+ LAG+LLK AYG +RFSLP+ P+AS FAP+ L + I YG Sbjct: 238 TWLPDAHVQAPTAGSIILAGVLLKMGAYGFIRFSLPMLPDASHYFAPLMQGLSAVAIVYG 297 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 ++A AQ DIK+LIAY+S+SHMGF+ + ++T + GAVIQM HG++ LF+ G Sbjct: 298 GFLALAQQDIKKLIAYSSISHMGFITLGLFTFTINGTTGAVIQMFNHGITTGALFLFIGL 357 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 +YER H+RD+ GGL + + F ++++ +PGT F+GE ++L G+F V Sbjct: 358 VYERTHSRDIPAYGGLLKAVPFYGIFFALFLLSSMAVPGTNGFIGEILVLSGTFGVNNWA 417 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 G + + Y L + + G + + ++ ++ REL L L++ + +GFY Sbjct: 418 ATAGVLGALLGAAYLLGIYRQMLLGPIRIP-DAAKMWDLNKRELCCALPLLIFVFWIGFY 476 Query: 482 PQPILDTSHSAIGNIQQWFVNS 503 P+P L + ++ + + + Sbjct: 477 PKPFLSILQPTLKHLLEQTLGA 498 >UniRef50_B3QY39 Proton-translocating NADH-quinone oxidoreductase, chain M n=14 Tax=Bacteroidetes/Chlorobi group RepID=B3QY39_CHLT3 Length = 545 Score = 396 bits (1019), Expect = e-109, Method: Composition-based stats. Identities = 177/544 (32%), Positives = 270/544 (49%), Gaps = 49/544 (9%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGY------SLT 55 +L ++ +P I + ++ R+++L LS+ LW + + Sbjct: 1 MLSLIVFLPIIAFVIVLAIPGSQKQIIRFVSLAAAIAQGVLSVILWQGYDKTMPGIVAGS 60 Query: 56 QSAGIPQWQSEFDMPWI-------PRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKE 108 +Q + WI I L +DGLS+ MV+LT L+ ++ V+ SW Sbjct: 61 NGNVSETFQFVERLDWITLNFGRFGTLNIEYFLGVDGLSITMVLLTALISIIGVVSSWT- 119 Query: 109 IEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRI 168 I+K + L + ++G F+A+D FLF+ FWE+ML+PMYFLI +WG G R Sbjct: 120 IQKQVKGYFLLYNLLSMAMMGCFVALDFFLFYVFWEIMLLPMYFLIGIWG-----GPNRE 174 Query: 169 TAATKFFIYTQASGLVMLIAILALVFVHYN-ATGVWTFNYEELLNT----------PMSS 217 AA KFF+YT + ML+ ++ L F + ATG TF+ +++ P S+ Sbjct: 175 YAAIKFFLYTLFGSVFMLLVLIGLYFSVIDPATGNHTFSMVAMVDQANYIPGSIFGPEST 234 Query: 218 GVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLP 277 Y + F+ FA+K+P+ P H WLPDAH +APT SV LAG+LLK YG+LR + P Sbjct: 235 FWRYAAFIALFVGFAIKVPMFPFHTWLPDAHVEAPTPISVILAGVLLKLGTYGMLRINFP 294 Query: 278 LFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLA 337 FP + A + G I I YGA A AQ D+K+++AY+S+SHMG+VL+ + + Sbjct: 295 FFPEVFTDLAYVIGVFGAINIIYGALCALAQLDLKKMVAYSSISHMGYVLLGMAAINTEG 354 Query: 338 YQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLG 397 GA+ QM HG A LF+L G +Y+R H+R + GGL S M + A+LG Sbjct: 355 MSGALFQMFNHGTITAMLFLLVGVIYDRAHSRQIEKFGGLSSYMPVYSGILTMAFFASLG 414 Query: 398 MPGTGNFVGEFMILFGSF--QVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQ 455 +PG F+ E I GSF +V I ++S G+VF + Y L L R + GK + + Sbjct: 415 LPGLSGFISEAFIFVGSFSSEVTRPIAMVSVLGIVFGAAYLLWSLQRMFLGKRRPDALYE 474 Query: 456 -----------------ELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQ 498 + REL M++ L ++++ LG YP P+L +I + Sbjct: 475 LHEDENGHQEIHFHDWTGKNDVDARELSMLIPLGIIVLFLGIYPMPVLGLMTESINKLVD 534 Query: 499 WFVN 502 Sbjct: 535 VLTT 538 >UniRef50_Q1DDD2 NADH dehydrogenase I, M subunit n=2 Tax=Cystobacterineae RepID=Q1DDD2_MYXXD Length = 577 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 182/535 (34%), Positives = 277/535 (51%), Gaps = 50/535 (9%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL ++ +P + L R + I M L LA + ++ P Sbjct: 8 LLNLVVFLPLVFAALVALLPAGESGQIRTVTFIAMVLDLAFGVWAYMAYVPGG------P 61 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 ++Q E+ W FG S H+ +DGL++ +++LT LG L VL S I+ FHL L+ Sbjct: 62 EFQLEYRARWFDLFGTSYHIGVDGLAVSLLLLTVFLGPLVVLASTTYIKFRIKEFHLALL 121 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + ++G +++D+ LF+ F+E ML+PMY L+ +WG + R AA KFF+YT A Sbjct: 122 VLQTTMLGALVSLDVLLFYIFFEAMLIPMYLLVGVWG-----AEDRQMAAVKFFLYTLAG 176 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEY-------------------- 221 L+ML+AI+A+ F+ + G +F+Y + N + + + Sbjct: 177 SLLMLVAIIAVYFIS-SPVGARSFDYASIYNGLLDANRQLSACTAGPAGACDSLTGLAAT 235 Query: 222 ------LLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFS 275 L F IAFAVK+P+ PLH WLPDAH QAP AGS+ LAG+ LK +G R++ Sbjct: 236 LHTWGPWLFAAFAIAFAVKVPMWPLHTWLPDAHVQAPVAGSMILAGVTLKMGTFGFWRYA 295 Query: 276 LPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQ 335 +P FP A+ + P L VIGI YGA M AQ DIK+LIAY+SVSH+G+ ++ I + Sbjct: 296 IPFFPVATQQARPFLATLAVIGIVYGALMCLAQRDIKKLIAYSSVSHLGYCMLGILAITA 355 Query: 336 LAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVAT 395 G+ QM+ HG+S LF+L G LYER H+R M GG+ M A + ++ Sbjct: 356 EGATGSAYQMLNHGVSTGALFLLFGYLYERRHSRLMADYGGIAKVMPVFTAAFVIITFSS 415 Query: 396 LGMPGTGNFVGEFMILFGSFQVVP-----------VITVISTFGLVFASVYSLAMLHRAY 444 + +PGT F+GEF++L G+F+ V +T G++ + Y L M+ + + Sbjct: 416 IAVPGTNGFIGEFLVLLGTFKSDLGEAAGNPHLTAVFGAFATLGVILGAAYMLWMVQKVF 475 Query: 445 FGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQW 499 FG + +Q L M+LRE +L +VL+ ++G PQP LD + Sbjct: 476 FGGI-THRENQHLTDMNLREGLTVLPFIVLVAVMGLQPQPFLDRLAPSTDRFLAR 529 >UniRef50_B8DS13 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DS13_DESVM Length = 519 Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 177/496 (35%), Positives = 261/496 (52%), Gaps = 22/496 (4%) Query: 5 WLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQ 64 ILI + R ++L + LA G+ L +Q Sbjct: 8 LSILIFLPLVAAALLLPLRDDETVRRVSLAASLVGLAA--------GWPLIAFNPDAGFQ 59 Query: 65 SEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWIL 124 M W+ R+G+ HLA+DG+S+LMV LT L VLCSW I K FH+ L+ + Sbjct: 60 FVERMTWVARWGLEYHLAVDGISILMVWLTLFTLPLCVLCSWTYIGKRVKEFHICLLLMT 119 Query: 125 GGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLV 184 IGVF ++D+ LF+ FWE ML+PMY LIA+WG G R A+ KFF+YT A + Sbjct: 120 SACIGVFTSMDLVLFYVFWEAMLIPMYLLIAVWG-----GAERRYASIKFFLYTLAGSTL 174 Query: 185 MLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWL 244 +L+AI+A TF+ +L+ +Y L +AFA+K+P+ P H WL Sbjct: 175 LLVAIVAFRIAGG------TFSIPDLMQQTFGFRFQYWAFLAMALAFAIKVPMFPFHTWL 228 Query: 245 PDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWM 304 P AH QAP+AGSV LA +LLK YG LRF LPL P AS FAP+ + + V+ I YG + Sbjct: 229 PAAHVQAPSAGSVILAAVLLKMGTYGFLRFCLPLTPEASVHFAPLMIGVSVVSILYGGAV 288 Query: 305 AFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYE 364 A QTDIK+L+AY+SV+HMGFV + I+ + QGA++QM+ HG+ LF++ G +YE Sbjct: 289 ALGQTDIKKLVAYSSVAHMGFVTLGIFLFQKSGVQGALLQMLNHGIVTGALFMMIGAMYE 348 Query: 365 RIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVI 424 R H+R++ G+ + +A+A+ G PGT FVGE ++ +FQ + + Sbjct: 349 RSHSREVADNMGMGKYLPAFMFFWGLYALASFGFPGTNGFVGEVLVFVAAFQQSLTVGAL 408 Query: 425 STFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQP 484 G + A+ Y + R +G + ++ ++ RE +LL VL++ +G P P Sbjct: 409 IVPGALLAAAYMFRVSLRMAWGSPST---AKTWNDLNRREWAYLLLPAVLVLWIGLAPAP 465 Query: 485 ILDTSHSAIGNIQQWF 500 L +I + Sbjct: 466 FLRLIDPSIDRLLADL 481 >UniRef50_D0L251 Proton-translocating NADH-quinone oxidoreductase, chain M n=41 Tax=Proteobacteria RepID=D0L251_HALNC Length = 507 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 185/518 (35%), Positives = 300/518 (57%), Gaps = 32/518 (6%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L ++ +P I G + RW AL + + LSL L Sbjct: 8 MLSLIVWLPIIAGIFVMWFGAGRARFARWFALASSVVVFLLSLALLPGFDTHTYA----- 62 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q + WIP+FGI HL +DG+SL +++LT V+ ++ +W+ I++ + + Sbjct: 63 -MQFVERVAWIPQFGIHYHLGVDGISLPLLILTTFTTVIVIVSAWEVIQEKAHQYLAAFL 121 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + G + G F A+D +F+FF+E ML+PM+ +I +WG G R+ A KFF+YT Sbjct: 122 IMEGMMNGTFAALDAIVFYFFFEGMLIPMFVIIGIWG-----GPRRVYATIKFFLYTFLG 176 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 + MLIA++ + F +F+ + P++ + L+ L FFIAFAVK+P+ P+H Sbjct: 177 SVFMLIALIYMYFKGG------SFSILHMQQLPLTLTEQVLIFLAFFIAFAVKIPMWPVH 230 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLPDAH +APT GSV LA I+LK YG LRFSLP+ P+ASA + + +I I Y Sbjct: 231 TWLPDAHVEAPTGGSVILAAIMLKIGGYGFLRFSLPITPDASALLDSMIIAFSLIAIVYI 290 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIY--------------TGSQLAYQGAVIQMIA 347 ++A Q+D+K+L+AY+S+SHMGFV + ++ +G +LA +GA++QMI+ Sbjct: 291 GFVALVQSDMKKLVAYSSISHMGFVTLGMFVIFMIAANPLNVSGSGVRLALEGAMVQMIS 350 Query: 348 HGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGE 407 HGL +A +F+ G LY+R+H+R++ GG+ + M W A+ + FA+A +G+PGT FVGE Sbjct: 351 HGLISAAMFLSIGVLYDRLHSREISAYGGVVNTMPWFAAMVVVFAMANVGLPGTSGFVGE 410 Query: 408 FMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFM 467 FM++ SF+ I +++ L+ + Y+L M+ R FG +++ +L ++ RE +M Sbjct: 411 FMVILASFKANFWIALLAALTLIIGASYTLWMVKRVIFGDVQNE-GVAKLKDVNKREAWM 469 Query: 468 ILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNSVT 505 + LVVL++L+G +P P+LD H+ I ++ Q + S Sbjct: 470 LGSLVVLIILVGIWPNPLLDLMHATIEHLAQQALTSKL 507 >UniRef50_A1KRT7 NADH dehydrogenase chain M n=30 Tax=Proteobacteria RepID=A1KRT7_NEIMF Length = 498 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 171/508 (33%), Positives = 278/508 (54%), Gaps = 23/508 (4%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVK-VPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 LL I IP G L T + + R +A + ++L L+ Sbjct: 6 LLSLAIWIPIAAGVLVLSTGKDSRAPLARVLAFMGALAGFLVTLPLFTGFDRLS------ 59 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 +Q WIP I+ L +DG+S+L ++L + +L VL W+ I+K + Sbjct: 60 GGYQFTEFHEWIPLLKINYALGVDGISVLFIILNAFITLLVVLAGWEVIQKRPAQYMAAF 119 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + + G + G F A D LF+ F+E ML+P+Y +I +WG G R+ A+ K F+YT Sbjct: 120 LMMSGLINGAFAAQDAILFYVFFEGMLIPLYLIIGVWG-----GPRRVYASVKLFLYTLM 174 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 L+ML+A++ L + + + V N + GV+ LL FF++FAVK+P+ P+ Sbjct: 175 GSLLMLVAMVYLYYQTGSFSIVDFQNI-----KQIPLGVQQLLFAAFFLSFAVKVPMFPV 229 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H WLPDAH +APT GS+ LA I LK AYG LRF LP+ P+A+ FAP+ + L +I + Y Sbjct: 230 HTWLPDAHVEAPTGGSMVLAAITLKLGAYGFLRFILPIMPDAARYFAPVIIVLSLIAVIY 289 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTG-----SQLAYQGAVIQMIAHGLSAAGL 355 +A QTD+K+L+AY+S+SHMGFV + ++ + A +GA+IQMI+HG +A + Sbjct: 290 IGMVALVQTDMKKLVAYSSISHMGFVTLGMFLFVNGQLNDWALKGAIIQMISHGFVSAAM 349 Query: 356 FILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSF 415 F+ G +Y+R+HTR++ GG+ + M A + F +A G+P T FVGEFM++ G+ Sbjct: 350 FMCIGVMYDRLHTRNIADYGGVVNVMPKFAAFMMLFGMANAGLPATSGFVGEFMVIMGAV 409 Query: 416 QVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLL 475 +V + ++ L++ + Y+L M R FG + + E+ ++ RE ++ +L V++ Sbjct: 410 KVNFWVGALAAMTLIYGASYTLWMYKRVIFGAIHNPHVA-EMKDINCREFAILAILAVVV 468 Query: 476 VLLGFYPQPILDTSHSAIGNIQQWFVNS 503 + +G YP ++ H A ++ S Sbjct: 469 LGMGLYPNAFIEVVHQAANDLIAHVAQS 496 >UniRef50_A0B819 F420H2 dehydrogenase subunit M n=2 Tax=Methanosarcinales RepID=A0B819_METTP Length = 502 Score = 387 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 181/506 (35%), Positives = 266/506 (52%), Gaps = 22/506 (4%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 + +I +P +G L + T G R +ALI + LAL+LQ++ + S Sbjct: 6 ISIMIAVPLVGAVLAFLTRSRGQ--ARLVALIASLVPLALALQMYTEFDKSSKL------ 57 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMW 122 Q W+P G+ + +D +S +V+LT ++ VL V+ +W E F L+ Sbjct: 58 MQFVESYDWVPSIGVRYTVGVDCISFPLVLLTAIVSVLVVIYAWGE-NHRPNQFFALLLL 116 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 GV+GVF A+D FLF+ FWE++L+PM+FLI +WG G + +A KFFIYT + Sbjct: 117 NEVGVLGVFTALDFFLFYIFWEIVLIPMFFLIGIWG-----GPRKDYSAIKFFIYTHVAS 171 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTP-----MSSGVEYLLMLGFFIAFAVKMPV 237 LVML+AI A+ F + G TF+ LL G+ + G F VKMP Sbjct: 172 LVMLLAIFAMYFTYRLPDGSRTFDMLTLLQATSDKTVFPPGLINAIFAGLLFGFLVKMPA 231 Query: 238 VPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 P H WLPDAH +APTAGSV LA +LLK YG+ R LP+ P+ F + +GV+ Sbjct: 232 FPFHTWLPDAHVEAPTAGSVVLAALLLKMGGYGIFRVILPMLPHVDKAFVTVIAVIGVLS 291 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 I YGA++A AQ DIK+L+AY+S+SHMGFV + + L+ QGA+ Q +HG+ LF+ Sbjct: 292 IIYGAFLALAQKDIKKLVAYSSISHMGFVTLGAVAFTWLSIQGAMFQQFSHGIITCALFM 351 Query: 358 LCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV 417 G + + TR + +GGL +M +L L +A+LG+PG FV EFM+L GS+ Sbjct: 352 SAGTIQHSVGTRIISELGGLADRMPKFASLMLAAFLASLGLPGMSGFVAEFMVLTGSYPT 411 Query: 418 VPVITVISTFGLV-FASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLV 476 PV T++ F V + Y L + FG + +L E+ + +V L + Sbjct: 412 FPVYTMLVVFTSVGVTAGYHLWACQKVLFGPILKKYL--DLHDPHAYEILAMSAIVFLTL 469 Query: 477 LLGFYPQPILDTSHSAIGNIQQWFVN 502 L G P I D +A + + V Sbjct: 470 LFGLQPALITDMMGTAAHQVMEPVVT 495 >UniRef50_Q37617 NADH-ubiquinone oxidoreductase chain 4 n=80 Tax=Eukaryota RepID=NU4M_PROWI Length = 523 Score = 387 bits (994), Expect = e-106, Method: Composition-based stats. Identities = 170/494 (34%), Positives = 267/494 (54%), Gaps = 20/494 (4%) Query: 6 LILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQW-- 63 ++ IP +G + + R IAL + LT +SL LW++ S Sbjct: 31 VLAIPLLGAIALLFVPSWKTQTIRNIALNSSLLTFLISLLLWIEFDSSSALFQFTDGVCS 90 Query: 64 -------QSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFF 116 ++ L +DG+SL ++LT LL + +L SW IE Y + Sbjct: 91 PNVYSDVTLAKAASSSSFSALNFALGVDGISLFFIILTTLLVPICILVSWNNIEVYVKEY 150 Query: 117 HLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFI 176 + + + ++ VF +D+ LF+ F+E +L+PM+ +I +WG + +I AA +FF+ Sbjct: 151 CIAFLVLETLMLTVFSVLDLLLFYIFFESVLIPMFIIIGVWGS----RERKIRAAYQFFL 206 Query: 177 YTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMP 236 YT ++ML+AIL + F T + E L + S + +L L FF +FAVK+P Sbjct: 207 YTLFGSVLMLLAILLIYFQ------TGTLDIEMLYLSDFSETRQCILWLAFFASFAVKVP 260 Query: 237 VVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVI 296 +VP+H WLP+AH +APTAGSV LAGILLK YG LRFS+PLFP A F P+ + VI Sbjct: 261 MVPVHIWLPEAHVEAPTAGSVILAGILLKLGTYGFLRFSIPLFPYACIYFTPLIYTMSVI 320 Query: 297 GIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLF 356 I Y + Q D+K++IAY+SV+HM FV I +++ + +G+++ MI+HGL + LF Sbjct: 321 AIVYTSCTTIRQIDLKKIIAYSSVAHMNFVTIGLFSQNTQGIEGSILLMISHGLVSPALF 380 Query: 357 ILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ 416 + G LY+R TR +R G M L +FF +A + +PGT +F GEF++ GS+Q Sbjct: 381 LCVGVLYDRHKTRLLRYYSGCGQTMPIFALLFVFFTMANISLPGTSSFPGEFLVFIGSYQ 440 Query: 417 VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLV 476 + + G+V + Y+L + +R +G +K + ++ RE FM L+ ++ Sbjct: 441 NNSFVAFCAATGMVLGAAYALWLCNRLIYGVSKPDFIN-TWSDVNRREFFMFAPLIAGIL 499 Query: 477 LLGFYPQPILDTSH 490 +G YP+P LD H Sbjct: 500 WIGVYPEPFLDAMH 513 >UniRef50_C1ZFV0 NADH dehydrogenase subunit M n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZFV0_PLALI Length = 599 Score = 386 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 168/450 (37%), Positives = 254/450 (56%), Gaps = 12/450 (2%) Query: 55 TQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQG 114 S PQ S P + +L +DGL + M++LT L V A+L SW EI + Sbjct: 107 PASTSKPQDPSTARSPSGDFINLEFYLGLDGLGMAMILLTTGLCVSAILVSWSEIRERSA 166 Query: 115 FFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKF 174 F+ ++ + G+IGVFLA D+ LF+ F+E L+P++ I +WG G R AA KF Sbjct: 167 EFYAGILILEAGLIGVFLAYDLILFYAFFEFTLLPLFLTIGVWG-----GPKRRYAAGKF 221 Query: 175 FIYTQASGLVMLIAILALVFVHYNATGVWT-FNYE----ELLNTPMSSGVEYLLMLGFFI 229 FIYT A LVML+ +++LV + TG+ T F+ L + P+ + +L L Sbjct: 222 FIYTLAGSLVMLLGLVSLVVETQSLTGISTPFSMPDMARALQDQPLPVETQTILFLLIAT 281 Query: 230 AFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFA-P 288 F +K+P+ P H WLP H +APTAGSVDLAG+LLK YG LR ++P+ P+AS P Sbjct: 282 GFLIKVPMFPFHTWLPLVHVEAPTAGSVDLAGVLLKLGCYGFLRIAIPMLPDASLTVGQP 341 Query: 289 IAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAH 348 + L VIG+ YG+ A+ QTDIKR++AY+S++H+G ++ ++ + G + MI H Sbjct: 342 LVAILAVIGVVYGSLCAYHQTDIKRMVAYSSIAHLGVCMLGLFALNAEGLSGGICMMINH 401 Query: 349 GLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEF 408 GL+ LF L G ++ER HTR + +GGL S++ L AL +F + A++G+PG F+GE Sbjct: 402 GLATGALFSLVGMIHERYHTRSLTDLGGLASRIPVLSALLVFISFASIGLPGLNGFIGEI 461 Query: 409 MILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQ-ELPGMSLRELFM 467 + L G FQV V VI T G+V ++ Y L M+ FG + + +++RE Sbjct: 462 LSLLGMFQVSAVYAVIGTTGVVLSAWYLLRMVQVGLFGPLREPAGDHSHVSDLTVREGLA 521 Query: 468 ILLLVVLLVLLGFYPQPILDTSHSAIGNIQ 497 I L + + LG +PQ +L+ + + Sbjct: 522 IWPLALACLGLGLFPQTLLNLIEPDVKALA 551 >UniRef50_D1CCC3 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCC3_THET1 Length = 511 Score = 385 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 171/508 (33%), Positives = 273/508 (53%), Gaps = 14/508 (2%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L +L+P L RWIA+I G+ L L+ + Sbjct: 12 ILTLTLLVPLASAILAALVPGDRKNTIRWIAVIGSGVNLMLAAIALASFRFG------TD 65 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q Q W P + +L IDG+S+L+ LT LL +A++ S+ I+ +++ L+ Sbjct: 66 QIQLVERWIWAPSLNLQYYLGIDGISVLLYGLTALLSFIAIVYSFGVIDYRIKEYYVALL 125 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + G++GVF+A+D+ LF+ F+E+ L+PM LI +WGH ++ +A KFF+YT A Sbjct: 126 VLETGMLGVFVALDLLLFYVFFELTLIPMALLIGVWGHG-----RKLYSAVKFFLYTLAG 180 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELL--NTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 L+ML AI ++ + T NY +LL S + + GFF AFA+K+P+ P Sbjct: 181 SLIMLAAIASIYVHTSSIPNGPTLNYVDLLRIAPNWSYAWQVWMFWGFFFAFAIKVPLFP 240 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 H WLPDAH APTAGS+ LAG+LLK YG LR+ LPL P AS + A I + L VI I Sbjct: 241 FHTWLPDAHVDAPTAGSILLAGVLLKMGGYGFLRWLLPLAPEASRDLAVIPITLSVIAIL 300 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 YGA + Q D+K+L+AY+SV+ MGFV++ I+ + QGA++QM++HG + LF+ Sbjct: 301 YGALVTLVQRDLKKLVAYSSVASMGFVVLGIFIFNLHGAQGAIVQMVSHGFISGALFLGV 360 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP 419 G +YER+HTR++ +GGL + M +L + ++A LG+PG FVGE ++ G++ P Sbjct: 361 GVIYERLHTREIAKLGGLATLMGPFASLWVMLSLANLGLPGFSAFVGEVLVTLGTWLYKP 420 Query: 420 VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLG 479 + ++ ++ Y L M+ R ++ S + +E +++LV +LG Sbjct: 421 WLAFPVYAYIILSAAYMLWMVARVFYLGKPESKVSLPPMNI-YQEALPLVVLVGFSFVLG 479 Query: 480 FYPQPILDTSHSAIGNIQQWFVNSVTTT 507 + P L + ++ + S + Sbjct: 480 VWATPFLRATEPSLVTLLGHLGVSTAAS 507 >UniRef50_Q39ZA6 Proton-translocating NADH-quinone oxidoreductase, chain M n=7 Tax=Geobacter RepID=Q39ZA6_GEOMG Length = 496 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 196/495 (39%), Positives = 290/495 (58%), Gaps = 9/495 (1%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L LI +P G LC R +AL LAL+ L + Sbjct: 6 ILTILIFLPLAG-CLCLAPVWHCRTSARAVALGFAVAELALAAWLLVAATGMPAAPGAPT 64 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 + D WI RFGI L +DG+SLLMV LT + V+A+ SW+ + + + ++ Sbjct: 65 GYFLWEDAVWIERFGIRYLLGMDGISLLMVALTAFITVVAMAVSWRAVTERTALHYFLIL 124 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + G++GVFLA+D+ LF+ FWE+ML+PM+FLI +WGH RI +A KFF+YT A Sbjct: 125 LMESGLMGVFLALDLVLFYLFWEVMLIPMFFLIGIWGHG-----RRIYSAVKFFLYTLAG 179 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 L+ML+AI+ + +H +ATG++TF L P++ L F +AFA+K P+ P+H Sbjct: 180 SLLMLLAIIGVYLIHGDATGIYTFTLPLLAKAPIAHAAAPWLFGAFLLAFAIKFPLFPVH 239 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLPDAH+ APTAGSV LA +LLKT AYGL+RF PLFP A+ F P L V+GI Y Sbjct: 240 TWLPDAHTDAPTAGSVILAALLLKTGAYGLVRFGYPLFPEAAKGFTPFISALAVVGILYA 299 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 +W+A+AQ D+KR++AY+SV HMGFV + I + S +A G+++QM+ HG++ LF L G Sbjct: 300 SWVAYAQEDMKRMVAYSSVGHMGFVALGIASWSPVALSGSILQMVNHGVTTGALFALVGM 359 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 L ER TR++ GG+W K L L FA+ + G+PG NF GEF+IL G F+ P Sbjct: 360 LDERTDTREIAAYGGVWGKAPKLAFFFLLFAMTSAGLPGLNNFTGEFLILAGVFRTTPAA 419 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 I+ G+V +Y++ ++ F +++ LP ++LRE ++ +L + V +G + Sbjct: 420 AAIAFIGIVLPLIYTVRLVQEVLF---QTERRPLRLPDVTLREEALLAVLATIDVYIGVH 476 Query: 482 PQPILDTSHSAIGNI 496 P+P+LD + + Sbjct: 477 PKPLLDILKVPVALL 491 >UniRef50_C3XEB0 NADH-quinone oxidoreductase subunit M n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XEB0_9HELI Length = 536 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 153/472 (32%), Positives = 256/472 (54%), Gaps = 15/472 (3%) Query: 28 PRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLS 87 + I + L L + LW+ + + Q + IP GI + +DG+S Sbjct: 7 AKRFGRIISFIELGLVIALWISYRVDIADT------QFFTKIFLIPALGIDYIVFVDGIS 60 Query: 88 LLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMML 147 L +++LT + LA + + F + L+ + ++ +F++ ++ +F+ WE+ L Sbjct: 61 LFLIILTAFIIFLANIYLQR--RDDAKPFVVCLLSLEAILMALFVSQNVLMFYTCWELAL 118 Query: 148 VPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNY 207 +P+ +++ +WG +I KFF+YT AS L+ML+AIL + ++ Y G W+F+ Sbjct: 119 LPVLYMVGVWGSG-----QKIYIGLKFFVYTFASSLMMLLAILYIGYLCYEQLGYWSFDL 173 Query: 208 EELLNTPM--SSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLK 265 L+ + + L LGFF++ AVK+P++PLH WLP +S+AP GSV L+ +L K Sbjct: 174 GVWLSGDLKIPLDTQIWLFLGFFVSIAVKIPIIPLHTWLPHIYSEAPALGSVMLSALLSK 233 Query: 266 TAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGF 325 Y LLRF LPLFP+AS F PI L VI + Y +AF Q DIK++IAY+S+SHMG Sbjct: 234 MGTYALLRFVLPLFPDASVHFMPIVSVLAVIMVVYAGIIAFKQKDIKKVIAYSSISHMGI 293 Query: 326 VLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLP 385 V++ I+ + GA+ M+AHG+++ GLF+L G LY R TR + GG+ M Sbjct: 294 VVLGIFAFNNEGISGAIFMMVAHGVTSGGLFMLAGMLYYRTMTRHVDDFGGVAHVMPHYS 353 Query: 386 ALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYF 445 ++ +G+P T FVGEF+ L+G FQ P++T I+ L+ A+ Y L + ++ Sbjct: 354 TFFAIVMLSNVGLPLTIGFVGEFLSLYGYFQTSPIMTAIAGTTLIIAASYMLYLFKNVFY 413 Query: 446 GKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQ 497 G K +Q L + +E ++ + +++ LG +P +L ++ + Sbjct: 414 GTLKQTHITQSLKDLGFKEFCVLGPIAFVIIWLGVFPNTLLKPMQVSVQQLV 465 >UniRef50_P57263 NADH-quinone oxidoreductase subunit M n=4 Tax=Buchnera aphidicola RepID=NUOM_BUCAI Length = 505 Score = 383 bits (985), Expect = e-105, Method: Composition-based stats. Identities = 254/508 (50%), Positives = 371/508 (73%), Gaps = 4/508 (0%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 MLL LI+IPF+ F + + R PRWIAL + TL + +Q++ Q Y + Q Sbjct: 1 MLLSLLIIIPFLSSFFSFFSPRLHNNFPRWIALSGIIATLLVVIQIFFQENYHIFQIRHY 60 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 P W + +PWI RFGI ++A+DGLS++M++ + L ++A++CSW EI+K +GFF+ N Sbjct: 61 PNWNCQLIVPWISRFGIEFNIALDGLSIIMLIFSSFLSIIAIICSWNEIKKNEGFFYFNF 120 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 M + G+IGVF++ D+FLFF FWE+ML+PMYFLIALW K K AA KFF+Y+Q Sbjct: 121 MLVFTGIIGVFISCDLFLFFCFWEIMLIPMYFLIALWSDKTEKKKN-FLAANKFFLYSQT 179 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 SGL++L +IL LVF HY +T + TFNY L+N P++ VEY++M+GFF++FA+KMP+VP Sbjct: 180 SGLILLSSILLLVFSHYYSTNILTFNYNLLINKPINIYVEYIVMIGFFLSFAIKMPIVPF 239 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 HGWLPD HS++ + GSV++ G+LLKTA Y LLR++L LFP+++ F+ IA++ G+I IFY Sbjct: 240 HGWLPDIHSRSLSCGSVEIIGVLLKTAPYALLRYNLVLFPDSTKSFSLIAVFWGIISIFY 299 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 GAW+AF+QT+IKRLIAY+SVSHMG +LI IY+ ++ A QG VIQM+++ L+ A L IL G Sbjct: 300 GAWIAFSQTNIKRLIAYSSVSHMGLILIGIYSNNERALQGVVIQMLSNSLTVAALCILSG 359 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 Q+Y+R T+DM MGGLWS + W+P SLFF++A LG+PGTGNF+GEF+IL G F+V P+ Sbjct: 360 QIYKRFKTQDMSKMGGLWSCIYWIPGFSLFFSLANLGVPGTGNFIGEFLILSGVFEVFPL 419 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 +++++T G+VF+S+YSL ++ + ++G K I ++ ++ +E++ I+ LV LV LG Sbjct: 420 VSILATIGIVFSSIYSLNVIQKIFYGPCKQNI---KVFFINKQEVWTIIALVFTLVFLGL 476 Query: 481 YPQPILDTSHSAIGNIQQWFVNSVTTTR 508 PQ I+D S+++I NIQ+ F NS+ R Sbjct: 477 NPQKIIDVSYNSIHNIQKEFNNSILKIR 504 >UniRef50_C1AB27 NADH-quinone oxidoreductase chain M n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AB27_GEMAT Length = 512 Score = 383 bits (985), Expect = e-105, Method: Composition-based stats. Identities = 190/514 (36%), Positives = 296/514 (57%), Gaps = 24/514 (4%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 MLL W++ +P +G R R + + M + +++ L+ + + Sbjct: 5 MLLNWVLFLPLLGAGALLALPRGNAPAVRMVTVGVMTVQFLMTVALYTHFD------STV 58 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 Q +PWI +G+S + +DGL++L+V+LTG LG L VL +W IE+ FH+ + Sbjct: 59 SGLQFATTVPWIAEWGVSYAIGMDGLNVLLVLLTGFLGPLVVLGAWTAIERDVTMFHVMV 118 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + + ++G FLA D+FLF+ FWE ML+PM+ +I +WG G R A KF +YT Sbjct: 119 LLLQFAMMGAFLAQDLFLFYVFWEAMLIPMFLIIGIWG-----GARRSYATIKFVLYTAF 173 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 ++ML A++ LV NA GV +F + +L+ + V+ L+ F ++FA+K+P+VPL Sbjct: 174 GSILMLAALIYLVQSLQNAGGVASFAFTDLMQAQLPLDVQITLLAAFALSFAIKVPMVPL 233 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H WLPDAH +APT GSV LAG+LLK YG ++ PLFP+A+ F P+ M L V+ I Y Sbjct: 234 HTWLPDAHVEAPTPGSVILAGVLLKMGTYGFIKLGFPLFPDATRVFTPMLMTLSVVSIVY 293 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 GA +A QTDIK++IAY+S+SH+G+V++ + + QGA+IQM++HGL AAGLF+L G Sbjct: 294 GACLALVQTDIKKIIAYSSISHLGYVMLGLLSLDLAGIQGAIIQMVSHGLVAAGLFLLVG 353 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP- 419 +YER HTR++ GGL ++ + F +A++G+P T F GEFM+L G+F Sbjct: 354 MVYERCHTRELSAYGGLARQIPVYAMFFIVFTLASVGLPTTSGFTGEFMVLLGAFNAAWP 413 Query: 420 ----------VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMIL 469 ++ V++ G+V ++Y L FG AK+ A L +SLRE ++ Sbjct: 414 QHLDGNQLPLILAVVAVTGVVLGALYMLRFALTFLFGPAKAPHAP--LNDLSLRERSILA 471 Query: 470 LLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNS 503 +L+V + LG +P L + A Q ++ Sbjct: 472 ILMVSIFALGLFPDGALQKTELAAKAFQSRMTST 505 >UniRef50_C3XM21 NADH-ubiquinone oxidoreductase n=4 Tax=Campylobacterales RepID=C3XM21_9HELI Length = 534 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 183/506 (36%), Positives = 285/506 (56%), Gaps = 19/506 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL LI P G L + A++ + LA +L LW S Sbjct: 4 LLTLLIFFPLFGALLAIGIKENLKT----YAIVISAIELAFALLLWYGFDKS------AD 53 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 +Q + + FG+S + +DG+SL +++L+ +G++ + ++L+ Sbjct: 54 GFQFITALSLVEGFGVSYLVGVDGISLFLILLSAFIGLIGFIY--LNENYEAKKLIISLL 111 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + +IGVF A+DM LF+ FWE+ LVPM ++I WG + RI AA KFF+YT Sbjct: 112 CLESIMIGVFCALDMILFYIFWELSLVPMLYIIGAWGSGS-----RIYAAVKFFLYTFLG 166 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLN-TPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 ++ML+ IL L + ++ +G+WTF+ E + + + GV+ L L FF AVK+P+ P Sbjct: 167 SMLMLVGILFLAYYYFEVSGIWTFSLLEWYSLSAIPKGVQLWLFLAFFAGLAVKVPMFPF 226 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H WLP AH QAPT GS+ LA +LLK YG +RFSLPLFP+AS F L +I I Y Sbjct: 227 HTWLPYAHGQAPTIGSIILAAVLLKMGTYGFVRFSLPLFPDASIFFLMPVAILSLIMIIY 286 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 GA++AFAQ DIK++IAY+S+SHMG +++ I+ + G+V M++HG+ + LF+L G Sbjct: 287 GAFVAFAQEDIKQVIAYSSISHMGVIMVGIFALNVEGITGSVFFMLSHGIISGALFMLVG 346 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 LYER HT+ + GG+ M A+ A+A+ G+P T FVGEF+ L G FQV P+ Sbjct: 347 MLYERRHTKMIAEFGGIAKVMPNYAAIFGIMAMASAGLPLTMGFVGEFLSLLGFFQVSPI 406 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 + I+ ++ +VY L + + +FGK + + + +L ++ RE +L LV +++ LG Sbjct: 407 MAGIAGISIIVGAVYMLHLYRKTFFGKVVN-VQNLKLSDLNAREWSALLPLVAIVIWLGV 465 Query: 481 YPQPILDTSHSAIGNIQQWFVNSVTT 506 YP+PIL+ + + N + + T Sbjct: 466 YPKPILEPINKGVENTLAIMQSRIVT 491 >UniRef50_Q1RKE5 NADH-quinone oxidoreductase subunit M n=17 Tax=Rickettsieae RepID=NUOM_RICBR Length = 494 Score = 382 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 163/501 (32%), Positives = 279/501 (55%), Gaps = 21/501 (4%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPR-----WIALITMGLTLALSLQLWLQGGYSLTQ 56 ++ I +P I K + ++A+++ LT ++ + ++ Sbjct: 6 IISITIFLPLISVLYILLFISQSKKPDKQIHTMYVAVLSSVLTFISTIYILIEFD----- 60 Query: 57 SAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFF 116 + P +Q W+ + G+ H+ IDG+S+ V LT L ++ ++ S ++KY + Sbjct: 61 -SSNPTYQFVERYSWLDKIGLEFHVGIDGISIFFVSLTSFLTLICIIGSLFTVKKYIKEY 119 Query: 117 HLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFI 176 + + + IG F +I++ +F+ F+E++LVPMY +I +WG G+ RI AA KFF+ Sbjct: 120 LVCFLLMESFCIGAFTSINLLVFYLFFEVILVPMYIIIGVWG-----GENRIYAAVKFFL 174 Query: 177 YTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMP 236 YT + L++I+ + + + + V+ +L FIAFA+K+P Sbjct: 175 YTFFGSVFFLLSIIYIY----SKIHSFDLSNIGEFTNNFPLHVQQILWWAIFIAFAIKIP 230 Query: 237 VVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVI 296 ++P H WLPDAH QAPT+GSV LAGILLK YG LR LPL PNAS EFA +WL VI Sbjct: 231 MIPFHTWLPDAHVQAPTSGSVILAGILLKLGGYGFLRVLLPLLPNASQEFAIYVIWLSVI 290 Query: 297 GIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLF 356 I Y + +A AQ D+K++IAY+S++HMG+V I I++ + GA+ QM++HG+ ++ LF Sbjct: 291 AIIYASLVALAQKDMKKMIAYSSITHMGYVTIGIFSFTDSGVSGALFQMLSHGIISSCLF 350 Query: 357 ILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ 416 ++ G LYER+HT+++ GG+ SKM L + + ++G+PGT F+GEF+ L G ++ Sbjct: 351 LIVGTLYERLHTKEIAKYGGVASKMPVLATFFMIAMLGSVGLPGTSGFIGEFLSLLGIYK 410 Query: 417 VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLV 476 V + T ++ G++ ++Y L + G+ ++ + + E+ I L++L++ Sbjct: 411 VNVIATFLAALGIILGAIYMLKLYKEVMLGEITNKEI-INFRDLYIYEIISIAPLILLII 469 Query: 477 LLGFYPQPILDTSHSAIGNIQ 497 G P IL+ H ++ N+ Sbjct: 470 YFGLMPSSILNVFHLSVENLL 490 >UniRef50_A9EX60 NADH dehydrogenase (Ubiquinone) n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9EX60_SORC5 Length = 671 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 182/506 (35%), Positives = 287/506 (56%), Gaps = 21/506 (4%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL LI +PF+G R + + R L +G SL L Sbjct: 108 LLNVLIGLPFVGAAAVLFMPRQLLSLLRGFTLAVLGAGFLASLWLLT--------VPMTV 159 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 W + WIP GI H+AIDG+SL +V+LT + +A S+ I+ L+ Sbjct: 160 GWHFQSIKEWIPALGIRWHVAIDGISLWLVLLTTFIAPIAAYASFGSIKNRIKELCFCLL 219 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 ++ G ++G F+A+D+FLFF FWE+MLVPM+ +I +WG G +I AA K F+YT A Sbjct: 220 FLQGAMLGAFVALDLFLFFLFWELMLVPMFVMIGIWG-----GVEKIKAAIKLFVYTMAG 274 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 ++ML I+ LV+ + TG +TF+Y L + G + L F IAF +K+P+ P+H Sbjct: 275 SMLMLAGIVYLVWANQKLTGAYTFDYLALSRVVLPRGAQMLCFWAFSIAFFIKVPMWPVH 334 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG-IFY 300 WLPDAH QAPT GSV LA ++LK Y LRFS+ LFP ++ A + ++G + Y Sbjct: 335 TWLPDAHVQAPTGGSVILAAVMLKIGTYAYLRFSMGLFPGPASSLAANLAGIAILGGVIY 394 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 GA +A+ Q+D+KRL+AY+SV+H+G+V++ ++ + QGAVIQM+ HG+S LF+L G Sbjct: 395 GALVAWKQSDVKRLVAYSSVAHLGYVMLGLFGVTPSGIQGAVIQMVNHGVSTGALFLLVG 454 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ---- 416 +Y+R HTR++ GGL M L L A++G+PGT F+GEFMI+ G++ Sbjct: 455 VIYDRRHTREVSEFGGLAKVMPVYATLFLIVTFASVGVPGTNGFIGEFMIIMGTYASERL 514 Query: 417 --VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVL 474 + T+ + G++ A+VY L+++ + +FG + ++ LP ++ RE + L+++ Sbjct: 515 GTFSGIHTIGAAAGVILAAVYMLSVVQKMFFGPLTNP-KNKHLPDVTPREGLALAPLILM 573 Query: 475 LVLLGFYPQPILDTSHSAIGNIQQWF 500 + ++G +P LD ++ + F Sbjct: 574 IFVIGLFPAIFLDRMKESVLSTYNQF 599 >UniRef50_Q7NHJ9 NADH dehydrogenase subunit 4 n=1 Tax=Gloeobacter violaceus RepID=Q7NHJ9_GLOVI Length = 498 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 189/508 (37%), Positives = 290/508 (57%), Gaps = 17/508 (3%) Query: 3 LPWLILIPFIGGFLCWQTERF-GVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 L ++ P +G + R AL GLT LS + Y+ T Sbjct: 6 LSLILFFPTLGALGLALLPGEVSYRFARVWALTVAGLTFLLSGLVAYNFDYTST------ 59 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 + Q + W+P+ GIS ++A+DGLSL +V+LTGLL VL++L SW E+ K +++ ++ Sbjct: 60 KPQFAETINWLPQLGISYNIAVDGLSLPLVLLTGLLVVLSILTSW-ELNKRARLYYVLIL 118 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + GV+G F+A D LFF +EM L+P+YFLI++WG GK R A TKF +YT S Sbjct: 119 LLSTGVLGAFMARDTILFFLAYEMELIPLYFLISIWG-----GKRREYAGTKFLLYTFLS 173 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 G+ +L+A L+ F ++ + TP +++ + + FA+KMP+VPLH Sbjct: 174 GVALLVAFLSTYFFSG--VNSFSIDVLANPATPYPLAFQFITLGLITLGFAIKMPLVPLH 231 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLPDAH +APTA SV LAG+LLK YG++RF L +FP A+ +FA + L I + Y Sbjct: 232 TWLPDAHVEAPTAVSVLLAGVLLKLGTYGIVRFGLGIFPEAAVQFAWLLSVLAAINVVYA 291 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 + A AQTDIK++IAY+S++HMG+V++ I + ++ GA+ QMI+HG+ + LF+L G Sbjct: 292 SLAAMAQTDIKKMIAYSSIAHMGYVVLGIASLNETGLGGAMFQMISHGIISGLLFMLVGL 351 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 +YE+ TR++ +GGL++ M + A + A+A G+PG FV EFM+ G + PV Sbjct: 352 IYEKSGTRELPKLGGLFATMPVVGAFFVGAAMANAGLPGMSGFVAEFMVFCGGIERYPVA 411 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 TV+ FG+V ++Y LAML RA+FGK + + + +P + EL +L+V+ V LG + Sbjct: 412 TVLCIFGIVLTAIYMLAMLARAFFGKLPANLET--MPRVKAWELIPATVLLVICVGLGLF 469 Query: 482 PQPILDTSHSAIGNIQQWFVNSVTTTRP 509 P + + Q P Sbjct: 470 PTLATGIFEPNVAQLVQQLDAKTVAQIP 497 >UniRef50_Q30PJ1 Proton-translocating NADH-quinone oxidoreductase, chain M n=8 Tax=Epsilonproteobacteria RepID=Q30PJ1_SULDN Length = 517 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 170/505 (33%), Positives = 277/505 (54%), Gaps = 17/505 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L LI P + G L + R + + L++ LW +L+ Sbjct: 5 ILSILIFFPALAGILGFVV---NKNSIRSYGVAVATIEFGLAMWLWFAFDSTLS------ 55 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q + +P FGI+ + +DG+SL +++L + + S E++ + L+ Sbjct: 56 GMQFMEQIALVPAFGINYIVGVDGISLFIIILAAF-FTMIGIASLGEMK-DIKNLIITLL 113 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 ++ ++GVF+A+D +F+ FWE+ LVPM ++I WG G RI A+ KFF+YT A Sbjct: 114 FLQMTMVGVFVALDAIVFYLFWELSLVPMLYIIGAWG-----GPLRIYASVKFFLYTFAG 168 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 LVML+ +L + + +Y ATG W+F + + + L + FF FA+K+P+ P H Sbjct: 169 SLVMLVGMLFMAYFYYQATGEWSFALLDWYRLILPESFQNWLFIAFFFGFAIKVPMFPFH 228 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLP AH QAPT GSV LA ILLK Y +RFSLPLFP+AS F L +I I Y Sbjct: 229 TWLPYAHGQAPTIGSVILAAILLKMGTYAFIRFSLPLFPDASVYFMYPIAVLAIIMIIYT 288 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 A +A+AQ DIK+++AY+SVSHMG +++ + + G++ MIAHG+ + LF L G Sbjct: 289 AMVAYAQKDIKQVVAYSSVSHMGVIILGTFALNVEGITGSIFLMIAHGVVSGALFFLVGV 348 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 +Y+R HT+ M GGL S M + +A++G+P T NFVGEF+ L G ++ ++ Sbjct: 349 IYDRRHTKLMSEFGGLASVMPRYATIFGIMLMASVGLPLTINFVGEFLSLLGFYKQSHIL 408 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 T+++ ++ ++Y L+ + +FG + ++ LP ++ REL ++ L ++ + LG Y Sbjct: 409 TLLAGTAIIVGAIYMLSAYKKMFFGVV-THEENRNLPDINKRELLALIPLTIITIWLGIY 467 Query: 482 PQPILDTSHSAIGNIQQWFVNSVTT 506 P+PIL+ + ++ + T Sbjct: 468 PKPILEPINKSVEGVVTLMHEKSLT 492 >UniRef50_C1DT37 NADH-quinone oxidoreductase subunit m (Nadhdehydrogenase i subunit m) (Ndh-1 subunit m) n=10 Tax=Aquificales RepID=C1DT37_SULAA Length = 502 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 175/453 (38%), Positives = 258/453 (56%), Gaps = 10/453 (2%) Query: 54 LTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQ 113 LT + Q WIP+FGI+ + +D LSL MV LT + V+A + S IEK Sbjct: 55 LTYDPSGYKIQFYEKYSWIPQFGINYEVGVDALSLTMVWLTAISFVVAFIWSTN-IEKRI 113 Query: 114 GFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATK 173 + + + + IGVF+A D+ F+ FWE+ML+PM+ +I +WG+ RI AATK Sbjct: 114 KEYFVAFLVLEAACIGVFVAWDLVAFYVFWEVMLIPMFLIIGVWGY-----AERIYAATK 168 Query: 174 FFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAV 233 FFIYT L +LI ++ + +Y V + +Y +LL + +E + L + FA+ Sbjct: 169 FFIYTFFGSLFLLIGVIGMYIYNYMENNVLSMSYFDLLKLSLPHNLEIIFFLLLALGFAI 228 Query: 234 KMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWL 293 K+P+ P H WLP AH QAPTAGSV LA +LLK YG +RF+LP FP AS F P+ L Sbjct: 229 KVPMWPFHTWLPAAHVQAPTAGSVILAAVLLKMGTYGFVRFNLPWFPEASKYFVPVMFAL 288 Query: 294 GVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAA 353 GVI I Y A MA AQT IKRLIAY+SVSHMGFV I + + GA+I MI+HGL++ Sbjct: 289 GVIAIIYTAMMAIAQTHIKRLIAYSSVSHMGFVTIGTFALNTEGVNGAIITMISHGLTSG 348 Query: 354 GLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFG 413 LF+ G +YER+H+ +M+ +GG+ + L + A+A+ G+PG FVGEF+ L G Sbjct: 349 ALFLAAGFIYERLHSYEMKDLGGMAKFVPVFATLFMISAMASAGLPGLSGFVGEFLALLG 408 Query: 414 SFQVVPVITVISTFGLVFASVYSLAMLHRAYF----GKAKSQIASQELPGMSLRELFMIL 469 +F+V + ++ LV + Y+L + R F + + L ++ EL+ L Sbjct: 409 TFKVSILTAALAGLSLVVGAAYTLWLYKRTMFEEELLTEEKKKEYSHLKDLNTAELWSFL 468 Query: 470 LLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVN 502 LV+ + ++G YP+ +D ++ + V Sbjct: 469 PLVIFMFVIGIYPKWWIDLINNTTTFVLHKIVG 501 >UniRef50_Q0RRV6 NADH-quinone oxidoreductase chain M (NADH dehydrogenase I, chain M) (NDH-1, chain M) n=13 Tax=Actinomycetales RepID=Q0RRV6_FRAAA Length = 610 Score = 373 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 157/394 (39%), Positives = 236/394 (59%), Gaps = 2/394 (0%) Query: 110 EKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRIT 169 + F L+ + G+IGVF A D+FLF+ F+E ML+PMYFLI +G R Sbjct: 188 RRSVPAFFALLLALEAGMIGVFAATDVFLFYVFFEAMLIPMYFLIGSYGPVKEQ-AQRSY 246 Query: 170 AATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFI 229 AA KF +Y+ GL+ML A++ L V + G TF++ L ++ GV+ LL LGFF+ Sbjct: 247 AAVKFLVYSLFGGLLMLAAVIGLYVVSADNLGHGTFDFATLRQMEITPGVQKLLFLGFFV 306 Query: 230 AFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPI 289 AFA+K P+ P H WLPDA +Q+PT G+V L G+L K +GL+R+ +PLFP+A+ FAP+ Sbjct: 307 AFAIKAPLFPFHTWLPDAGAQSPTGGAVLLVGVLDKVGTFGLIRYCIPLFPDAADYFAPL 366 Query: 290 AMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHG 349 + L V+GIFYGA +A Q D+KRL+AYTS++H GF+ + ++ + A GAV+ M+ HG Sbjct: 367 VLGLAVVGIFYGALLAIGQRDMKRLVAYTSLAHFGFIALGLFAFTSQAGTGAVLYMVNHG 426 Query: 350 LSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFM 409 LS LF++ G L R +RD+ GGL L + L +++L +PGT +FV EF+ Sbjct: 427 LSTGLLFLVVGFLVTRRGSRDVGAYGGLAKVTPVLAGVFLLAGLSSLALPGTNSFVSEFL 486 Query: 410 ILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMIL 469 +L G+F + +++T G+V A++Y L + R G + ++ L + LRE ++ Sbjct: 487 VLVGTFTANKPLAIVATCGIVLAAIYVLYLYQRTMTGPVVHE-ENRVLHDLGLREKVVVA 545 Query: 470 LLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNS 503 LV L+V LG YP+P+LD + S Sbjct: 546 PLVALIVALGVYPKPLLDIIRPTVTATYADIGKS 579 >UniRef50_D2SHE2 Proton-translocating NADH-quinone oxidoreductase, chain M n=6 Tax=Actinomycetales RepID=D2SHE2_9ACTO Length = 545 Score = 372 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 177/489 (36%), Positives = 269/489 (55%), Gaps = 40/489 (8%) Query: 56 QSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI---EKY 112 AG ++Q + WIP FG+ L +DG++L+M++L G+L + VL SW++ + Sbjct: 54 FDAGGERFQLTTSVSWIPDFGVDFALGVDGIALVMLLLIGVLVPVVVLASWRDEPTGHRS 113 Query: 113 QGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAAT 172 F L+ + ++GVF A D+FLF+ F+E MLVPMYFLI +G G R AA Sbjct: 114 VKTFFAWLLLLESLMVGVFAATDVFLFYVFFEAMLVPMYFLIGSFG-----GPRRQYAAV 168 Query: 173 KFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFA 232 KFF+Y+ GLVML A++ L V G TF ++ L + GV+ LL LGFF+AFA Sbjct: 169 KFFLYSLVGGLVMLAAVIGLYVVSAAELGEGTFAFDALRGIEIDPGVQKLLFLGFFVAFA 228 Query: 233 VKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMW 292 +K P+VP H WLPD+ ++AP GSV L G+L K +G LR+ LPLFP+AS + AP + Sbjct: 229 IKAPLVPFHTWLPDSGAEAPIGGSVLLVGVLDKVGTFGFLRYCLPLFPDASRDLAPYVLA 288 Query: 293 LGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSA 352 L V G+ Y A +A Q+D+KRL++YTS++H GF+ + I+ + A G+V+ M+ HG++ Sbjct: 289 LAVAGVLYAALLAMGQSDMKRLVSYTSIAHFGFIALGIFAFTTEAATGSVLYMVNHGIAT 348 Query: 353 AGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILF 412 LF++ G L R +R++ GG+ ++ L + L +A+L +PGT +FV EF++L Sbjct: 349 GLLFLVVGMLIARGGSREVGDYGGVAAQAPLLAGVFLVAGLASLALPGTNSFVSEFLVLI 408 Query: 413 GSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQ----------------- 455 GSF PV TV++T G+V A++Y L + R G + + Sbjct: 409 GSFPTRPVFTVLATVGIVLAALYVLLLYQRTMHGPPRGVLLEPSPGTPAPATGGGGGATA 468 Query: 456 ---------------ELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWF 500 + +S REL + +V L++ LG YPQP++D A+ Sbjct: 469 ATATLEAPAAAPARLRVRDLSRRELAVAAPMVALVIALGVYPQPLIDLIEPAVAATMSDV 528 Query: 501 VNSVTTTRP 509 P Sbjct: 529 GADPAGVSP 537 >UniRef50_O53307 NADH-quinone oxidoreductase subunit M n=26 Tax=Actinomycetales RepID=NUOM_MYCTU Length = 553 Score = 372 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 161/533 (30%), Positives = 259/533 (48%), Gaps = 48/533 (9%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L L L+P G L ++ +W ++ LTLA+S+ + + Sbjct: 7 LSVLWLVPLAGAVLIILLPPGRRRLAKWAGMVVSVLTLAVSIVVAAEF------KPSAEP 60 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSW---------------- 106 +Q WIP FG L +DG+++++V+LT +L L ++ W Sbjct: 61 YQFVEKHSWIPAFGAGYTLGVDGIAVVLVLLTTVLIPLLLVAGWNDATDADDLSPASGRY 120 Query: 107 -------------KEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFL 153 E + + + I V+ +A+D+ LF+ F+E ML+PMYFL Sbjct: 121 PQRPAPPRLRSSGGERTRGVHAYVALTLAIESMVLMSVIALDVLLFYVFFEAMLIPMYFL 180 Query: 154 IALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNT 213 I +G G R AA KF +Y GL+ML A++ L V TF++ E++ Sbjct: 181 IGGFG----QGAGRSRAAVKFLLYNLFGGLIMLAAVIGLYVVTAQY-DSGTFDFREIVAG 235 Query: 214 ------PMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTA 267 V L LGF AFA+K P+ P H WLPDA ++ A +V + ++ K Sbjct: 236 VAAGRYGADPAVFKALFLGFMFAFAIKAPLWPFHRWLPDAAVESTPATAVLMMAVMDKVG 295 Query: 268 AYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVL 327 +G+LR+ L LFP+ S F P+ + L +IG+ YGA +A QTD+ RLIAYTS+SH GF++ Sbjct: 296 TFGMLRYCLQLFPDPSTYFRPLIVTLAIIGVIYGAIVAIGQTDMMRLIAYTSISHFGFII 355 Query: 328 IAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPAL 387 I+ + G+ + M+ HGLS A +F++ G L R +R + GG+ L Sbjct: 356 AGIFVMTTQGQSGSTLYMLNHGLSTAAVFLIAGFLIARRGSRSIADYGGVQKVAPILAGT 415 Query: 388 SLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGK 447 + A+AT+ +PG F+ EF++L G+F + LV ++VY L + R G Sbjct: 416 FMVSAMATVSLPGLAPFISEFLVLLGTFSRYWLAAAFGVTALVLSAVYMLWLYQRVMTGP 475 Query: 448 AKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWF 500 ++ + + RE+ ++ L+ LL++LG YP+P+LD + A+ N Sbjct: 476 VAEG--NERIGDLVGREMIVVAPLIALLLVLGVYPKPVLDIINPAVENTMTTI 526 >UniRef50_Q7V4E4 NAD(P)H-quinone oxidoreductase chain 4 n=43 Tax=cellular organisms RepID=NU4C_PROMM Length = 563 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 192/515 (37%), Positives = 279/515 (54%), Gaps = 23/515 (4%) Query: 3 LPWLILIPFIGGFLCWQTERFGV-KVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 L IL P +G FL G K RW AL +T +++ +L G + Sbjct: 28 LSLSILFPIVGAFLVPFIPDEGEGKQVRWFALGIALVTFLITVAAYLYG-----YDPSLS 82 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q + W+P G++ + DG+S+ +++LT + LAVL +W + F ++ Sbjct: 83 GLQLSERVSWLPDLGLTWAVGADGISMPLILLTSFITALAVLAAWP-VTFKPKLFFFLIL 141 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + GG I VF DM LFF WE+ L+P+Y L+A+WG GK R AATKF IYT S Sbjct: 142 AMDGGQIAVFAVQDMLLFFLAWELELLPVYLLLAIWG-----GKKRQYAATKFIIYTAGS 196 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 L +L+ LA+ F G F Y L +G + L G IAF VK+P+VPLH Sbjct: 197 SLFILLVALAMGFFGG---GTPNFEYTNLAQQSFGTGFQLLCYAGLLIAFGVKLPIVPLH 253 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLPDAH +A + LAGILLK Y L+RF+ L P A A+FAP+ + LGV+ I Y Sbjct: 254 TWLPDAHGEATAPVHMLLAGILLKMGGYALMRFNAQLLPEAHAQFAPLLIVLGVVNIIYA 313 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 A +FAQ ++KR IAY+S+SHMGFVLI I + S L GA++QMI+HGL A LF L G Sbjct: 314 ALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFSALGTSGAMLQMISHGLIGASLFFLVGA 373 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFG-------S 414 Y+R HT + MGG+ KM+ + AL A+A+L +PG FV E M+ G + Sbjct: 374 TYDRTHTLQLEEMGGVGQKMRIMFALWTVCALASLALPGMSGFVSELMVFVGFATDEAYT 433 Query: 415 FQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQ-ELPGMSLRELFMILLLVV 473 VI ++ G++ +Y L+ML +FGK Q+ S L RE+++I L+V Sbjct: 434 LTFRIVIAGLAAIGVILTPIYLLSMLREIFFGKENDQLVSHTNLVDAEPREVYIISCLLV 493 Query: 474 LLVLLGFYPQPILDTSHSAIGNIQQWFVNSVTTTR 508 ++ +G YP+ + D+ ++I + + ++ + Sbjct: 494 PIIGIGLYPRLMTDSYTASIQELVKRDDLALQRIK 528 >UniRef50_D1AZ50 Proton-translocating NADH-quinone oxidoreductase, chain M n=3 Tax=Campylobacterales RepID=D1AZ50_SULD5 Length = 508 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 172/496 (34%), Positives = 286/496 (57%), Gaps = 17/496 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L L+ P G L + + R + + LS+ LW+ + Sbjct: 4 ILSLLVFFPAAAGLLGFLVAKES---IRAYGISVSAIEFVLSVILWMGFD------SANA 54 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 +Q +IP +G+S +L +DG+SL +V+L+ + ++A++ IEK ++++ Sbjct: 55 GYQFVEFYAFIPSYGMSYYLGVDGISLFLVILSTFITMIALIA--LSIEKDVKNLIISVL 112 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 ++ ++GVFL +D+ F+ FWE+ LVPM ++I WG G+ R+ AA KFF+YT A Sbjct: 113 FLEMTMVGVFLILDVIWFYAFWELSLVPMLYIIGGWG-----GEKRMYAAIKFFLYTFAG 167 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 ++ML+ IL + F++Y ATG+W+F + + + L FF+ FA+K+P+ P H Sbjct: 168 SVLMLVGILYMGFLYYEATGIWSFALPDWHLLQVPFTTQLWLFGAFFLGFAIKVPMFPFH 227 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLP AH QAPT GS+ LA +LLK +YG +RFSLPLFP+AS F + VI + Y Sbjct: 228 TWLPYAHGQAPTIGSIILAAVLLKMGSYGFVRFSLPLFPDASVYFLIPVAIICVIMVIYA 287 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 A +A+AQ D+K++IAY+S+SHMG V++ + + G++ M++HG+ + LF+L G Sbjct: 288 AMIAYAQDDMKQVIAYSSISHMGIVILGTFAMNAEGITGSIFLMLSHGIVSGALFMLVGV 347 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 +Y+R HT+ M GGL M + +A++G+P T FVGEF+ L G ++V VI Sbjct: 348 IYDRRHTKLMSQFGGLAQVMPRFATIYGIMLMASVGLPLTIGFVGEFLSLMGFYRVSWVI 407 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 T+ + G++ +VY L + +++FG + ++ L +S +EL ++ LV L+V LG Y Sbjct: 408 TLFAGTGIILGAVYMLVLYKKSFFGAVVHE-ENRGLKDLSAKELTALIPLVALVVALGVY 466 Query: 482 PQPILDTSHSAIGNIQ 497 P+P+L T ++ + Sbjct: 467 PKPLLSTIDMSVQKML 482 >UniRef50_Q9MD18 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Scenedesmus obliquus RepID=Q9MD18_SCEOB Length = 521 Score = 370 bits (950), Expect = e-101, Method: Composition-based stats. Identities = 164/497 (32%), Positives = 259/497 (52%), Gaps = 14/497 (2%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL ++++P K+ R+ AL+ +TL L +LW + + Sbjct: 24 LLLTVLIVPLARALFLCVLPGKESKLHRFYALLFTLVTLILCTRLWRGF---VPAAVEPF 80 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q + W I + +D LSL MV+LT L LAVLCSW + F+ L+ Sbjct: 81 QQVVGLNRSWNGLLSIKLEFGLDSLSLWMVLLTAALMPLAVLCSWNTQNAHSQSFYRLLL 140 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + + F ++D+ F+ +E L+PM+ LI L G ++ AA +YT Sbjct: 141 ALESFLFRCFTSLDLLCFYVLYECSLLPMFLLIGLGGS----RARKVRAAYLLVLYTLVG 196 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 L ML +L L + T NY L + + S + LL GFF+AFAVK+P++PLH Sbjct: 197 SLAMLPCLLLLY------SRAGTTNYLLLRSLNIESSRQLLLWWGFFLAFAVKVPLMPLH 250 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLP+AH + TAGSV LAG+LLK YGLLRF+L +FP SA P + +IG+ Y Sbjct: 251 LWLPEAHVERSTAGSVLLAGVLLKLGTYGLLRFNLYMFPERSAYLGPRVSTICLIGVIYR 310 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 + Q D+K+++AY+SV+HM V++A++T +++ G++ M+AHG+ + LF+ G Sbjct: 311 SLTTLRQVDLKKIVAYSSVAHMSMVVLALFTMNEVGILGSIFTMLAHGVRSPALFLCVGA 370 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 LY+R HT+ ++ +GG + M F++ + +P T NFVGEF+ L G F V Sbjct: 371 LYDRTHTKRLKYLGGAATAMPLFSIWFFIFSLCNMALPLTPNFVGEFLSLCGIFAQNWVS 430 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 I G++ ++VY+L R G K Q S + ++ RE + + +L ++ + G Sbjct: 431 LTICLGGVILSAVYTLWAYARVVHGMPKIQYLS-GMADLNRREWWSLAILAIIALWWGLK 489 Query: 482 PQPILDTSHSAIGNIQQ 498 P +LD+ S + QQ Sbjct: 490 PGAVLDSLGSTVYYWQQ 506 >UniRef50_Q3MAR0 NAD(P)H-quinone oxidoreductase chain 4 2 n=84 Tax=cellular organisms RepID=NU4C2_ANAVT Length = 561 Score = 370 bits (950), Expect = e-101, Method: Composition-based stats. Identities = 175/543 (32%), Positives = 268/543 (49%), Gaps = 51/543 (9%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L +IL+P + K+ RW AL L + A Sbjct: 9 LTAIILLPLVASAFIPLLPDKEGKLVRWYALGVGIADFVLMCYTFWH-----HYDASSAT 63 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMW 122 +Q W+P+ G S +++DG+S+ +V+L G + L++L +W+ + F+ ++ Sbjct: 64 FQLVEKYDWVPQIGFSWAVSVDGISMPLVLLAGFVTTLSMLAAWQ-VNLKPRLFYFLMLV 122 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 + IGVF+A D+ LFF WE+ LVP+Y L+++WG G+ R AATKF +YT A+ Sbjct: 123 LYSAQIGVFVAQDLLLFFIMWELELVPVYLLVSIWG-----GQKRRYAATKFLLYTAAAS 177 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 + +LIA LA+ N TF+ EL +E LL G IAF VK+ + PLH Sbjct: 178 IFILIAGLAMALHGDNT----TFDIVELGAKNYPLALELLLYAGLLIAFGVKLAIFPLHT 233 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGA 302 WLPDAH +A S+ LAG+LLK YGL+R +L L P+A FAP+ LGVI I YG Sbjct: 234 WLPDAHGEASAPVSMILAGVLLKMGGYGLIRLNLELLPDAHIYFAPVLATLGVINIIYGG 293 Query: 303 WMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQL 362 +FAQT +KR +AY+SVSHMGFVL+ I + + + GA++QM++HGL AA LF L G Sbjct: 294 LNSFAQTHMKRRLAYSSVSHMGFVLLGIASFTDVGVSGAMLQMLSHGLIAAVLFFLAGVT 353 Query: 363 YERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV-- 420 Y+R HT M +GG+ M + AL +A+L +PG FV E + G Sbjct: 354 YDRTHTMAMDNLGGIGQAMPKVFALFTAGTMASLALPGMSGFVSELKVFIGVTTSDIYSP 413 Query: 421 -----ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQE------------------- 456 + ++ G++ +Y L+ML + ++G + Sbjct: 414 TFCTVMVFLAAVGVILTPIYLLSMLRQVFYGTGAELSCNINNGAYENQEDEGTACFGTDC 473 Query: 457 -------LPGMSLRELFMILLLVVLLVLLGFYPQP---ILDTSHSAIGNIQQWFVNSVTT 506 S+RE+F+ +VL++ +G YP+ + D A+ + + Sbjct: 474 LLPGEAVYRDASIREVFIAASFLVLIIGVGVYPKIATQLYDVKTVAVNTQVRQSYTQIAQ 533 Query: 507 TRP 509 + P Sbjct: 534 SNP 536 >UniRef50_A5UVF7 Proton-translocating NADH-quinone oxidoreductase, chain M n=2 Tax=Roseiflexus RepID=A5UVF7_ROSS1 Length = 507 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 175/514 (34%), Positives = 279/514 (54%), Gaps = 22/514 (4%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL +I +P +G + R V R +++ L LA +L + Sbjct: 6 LLSLMIWLPALGALVVLTLPRERVAAQRSVSMSAALLALAAALGVVFFFD------PARA 59 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 +Q + WIP +GIS +++DG+SL +VVLT L +A+ SW IE+ + FH ++ Sbjct: 60 GFQLVESVAWIPSWGISYTVSVDGISLWLVVLTAFLTPVALAASWGTIERQERAFHALVL 119 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + G+ GVF A DM LF+ F+E LVP LI +WG G R AA KFF YT Sbjct: 120 LLASGLFGVFTAQDMLLFYVFFEFTLVPTALLIGIWG-----GVERRYAAIKFFAYTFTG 174 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNT------PMSSGVEYLLMLGFFIAFAVKM 235 + +L+ I+ L +H ATGV+TF+ +L + ++ E L+ FFI FAVK Sbjct: 175 SVFLLLGIIGLYLLHGQATGVYTFDIATILASLQLGTLQLNPAAERLMFGLFFIGFAVKT 234 Query: 236 PVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGV 295 P+ P H W+ AH++AP++G++D+ G+L+K AYGL+R+++ LFP +A AP L V Sbjct: 235 PIWPFHTWMTTAHAEAPSSGAIDIVGLLIKIGAYGLIRYTIQLFPATAAWAAPAISVLAV 294 Query: 296 IGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGL 355 IGI Y AW+A+ QTD+KRL+AY SVSH+G +++ ++ + G+V M+ L+ L Sbjct: 295 IGILYAAWIAYQQTDMKRLLAYASVSHLGLIVLGMFALNPQGIAGSVAHMVNSALTTGAL 354 Query: 356 FILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSF 415 F++ G L R +R+++ GGLW L +L+L + ++G+PG FV EF +L G++ Sbjct: 355 FLVVGMLVARRGSRELKSYGGLWKSTPVLGSLTLILVLGSIGLPGLNGFVSEFAVLQGAW 414 Query: 416 QV---VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLV 472 + + + G V A+VY L M A+ G A ++A P + REL +++++ Sbjct: 415 RSPGLGWRYALPALLGAVLAAVYLLHMYRMAFMGDAPPELAQ--APDVRPRELALLVIMA 472 Query: 473 VLLVLLGFYPQPILDTSHSAIGNIQQWFVNSVTT 506 +VL G YP + + I + + + Sbjct: 473 TPVVLFGLYPNLLFGPMQQSATQIAGGTLQYLAS 506 >UniRef50_A7NEJ8 NADH-quinone oxidoreductase, subunit M n=19 Tax=Francisella RepID=A7NEJ8_FRATF Length = 529 Score = 367 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 196/531 (36%), Positives = 283/531 (53%), Gaps = 47/531 (8%) Query: 2 LLPWLILIPFIGGFLCWQTE--RFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAG 59 LL +I +P +GGF+ T V RW+AL+ LTLAL + L YS + Sbjct: 7 LLSLIIWLPIVGGFVVLATRTKELHGDVARWVALVFSCLTLALCIPLVTSFDYSSSA--- 63 Query: 60 IPQWQSEFDMPWIPRFG---ISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFF 116 Q + + W FG I L +DG S+L +VLT ++ VL +W I+ + Sbjct: 64 ---MQFQESVKWFKVFGMHDIYYSLGVDGFSVLFIVLTSFATLVIVLAAWISIKTKVRQY 120 Query: 117 HLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFI 176 + G GVF A D L++ FWE +L+P I +WG GK + AA K+F+ Sbjct: 121 MAIFLITCGLTNGVFCATDSILYYVFWEALLIPTCLGIGIWG-----GKHKAYAAVKYFM 175 Query: 177 YTQASGLVMLIAILAL----------------VFVHYNATGVWTFNYEELLNTPMSSGVE 220 YT + +L AIL + + N T + + + + + Sbjct: 176 YTFFGSVFLLAAILYIQTRVAASPTHFLVNQDTYSIQNFIAWATQSQGFIDSVKFTLTAQ 235 Query: 221 YLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFP 280 +L+ FF+AFAVK+P+ P H WLPDAHS+AP GSV LA ++LK AYG LRF++P+ P Sbjct: 236 WLVFGAFFLAFAVKIPMWPFHSWLPDAHSEAPAGGSVILAALMLKLGAYGFLRFAIPMLP 295 Query: 281 NASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYT-------- 332 +A + + + +I I Y +A AQTD+KRLIAY+S+SHMG V + +++ Sbjct: 296 EVTASLEYVLIIMSLIAIVYVGVVAVAQTDVKRLIAYSSISHMGLVTLGLFSIFILKNAD 355 Query: 333 ------GSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPA 386 +QLA QGAV QMIAH S+ G+FI G LY R+HTR++ G+ M Sbjct: 356 PVLGTTHAQLALQGAVFQMIAHAFSSGGMFIGIGYLYLRMHTREISDFSGVAKTMPIFAT 415 Query: 387 LSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFG 446 L F +A +G+PGT FVGEFMIL FQ P+I +I+ LV A +Y+L M R +FG Sbjct: 416 FFLLFCMANVGLPGTSGFVGEFMILLAVFQYSPLIALIAGLTLVIAPIYTLWMYKRVFFG 475 Query: 447 KAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQ 497 + S + L ++ ELF+ +LL V ++L GFYP+PIL S +A +I Sbjct: 476 EVVSTQVA-SLTDLNRMELFVFILLAVPILLFGFYPEPILQLSAAASAHIV 525 >UniRef50_B2TCE8 Proton-translocating NADH-quinone oxidoreductase, chain M n=21 Tax=Proteobacteria RepID=B2TCE8_BURPP Length = 518 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 156/503 (31%), Positives = 262/503 (52%), Gaps = 21/503 (4%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVP-RWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 LL LI IP + G + + + RW+ALI + L +T Sbjct: 5 LLSLLIWIPIVAGVVVLRAGSDAARSRTRWLALIGAIAGFLPVIPLVTNFRNDVTS---- 60 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 Q + W P F I+ H+ +DG+SL +V LT L ++ V+ SW+ I + + Sbjct: 61 --MQFVENARWSPSFDIAWHVGVDGISLWLVALTALTTIIIVVASWESITERTAQYFGAF 118 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + + G + GVF ++D LFF +E L+P+Y LI WG R AA KFF + Sbjct: 119 LMLSGFMQGVFTSLDGMLFFISFEATLIPLYLLIGTWGQS-----NRSYAAVKFFFVSFL 173 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 ++L L+ + Y + +F+ T + + + L+ LGF AF VK+P+ PL Sbjct: 174 G------SLLMLMSMLYLYSQTHSFDLALWRETHLGTWPQVLIFLGFLAAFGVKVPMWPL 227 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H WLPD H PT +V + +LK YGLLRF+LP+ P AS FAP+ + L ++ + Y Sbjct: 228 HTWLPDVHLDGPTGAAVMIG--MLKLGGYGLLRFALPIAPQASHFFAPMMITLSLVAVIY 285 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 + +A QTD++RL+AY++V+HMG V + ++ +++ GA++QM+++G+ + + + G Sbjct: 286 ASLLALVQTDMRRLLAYSTVAHMGLVTLGLFVFNRIGQAGAIVQMLSYGVVSGAMLLCTG 345 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 LY+R T + GG+ + M A + F++A +G+PGT FVGEFM+L G+ + Sbjct: 346 MLYDRTKTASIAEYGGVANTMPRFAAFVMLFSMANIGLPGTSGFVGEFMVLMGAIRFNFW 405 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 I ++ L+ ++ Y+L M R FG + + L + RE ++ + +L++ +G Sbjct: 406 IGAMAATTLILSAAYTLWMYKRVIFGAIANARVA-NLKDLGKREFVLLGAMALLVLAIGI 464 Query: 481 YPQPILDTSHSAIGNIQQWFVNS 503 P+P D ++G + S Sbjct: 465 NPKPFTDAIDPSVGTLLAQSERS 487 >UniRef50_UPI00016C46D6 proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C46D6 Length = 636 Score = 366 bits (941), Expect = 1e-99, Method: Composition-based stats. Identities = 141/452 (31%), Positives = 226/452 (50%), Gaps = 34/452 (7%) Query: 76 GISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAID 135 + +L +DGL+L +V L ++ V +L SW+ ++ G F+ L + GVIG FL+ D Sbjct: 118 NVQFYLGVDGLNLWLVALASVMLVPVILVSWESVQHRPGAFYGWLFVLQAGVIGAFLSFD 177 Query: 136 MFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFV 195 + LF+ F+E+ L+P +FLI WG R AA KFF+YT A L+ L+ ++ +V Sbjct: 178 VVLFYVFFELTLIPSFFLIGNWG----ATSARRDAARKFFLYTLAGSLLTLVGVIGVVLT 233 Query: 196 HYNATGVWTFNYEELLNT--------------------PMSSGVEYLLMLGFFIAFAVKM 235 + + G TF+ +L+ ++ L L F VK+ Sbjct: 234 NPSEDGTITFSIPKLMANVQEGMHAAHLKALAGDGSALAAKHQTQFWLFLALMAGFMVKV 293 Query: 236 PVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFA-PIAMWLG 294 P+ P H WLP A+ +APT ++ L+ ++ K +G+LR LPL P+A+ ++ P+ Sbjct: 294 PIWPFHTWLPSAYGEAPTGVTMLLSALMAKLGTFGILRLVLPLVPDAAIQYGLPVIGGFA 353 Query: 295 VIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAG 354 GI Y A A+A D+K +IAY+SVSH+GF+++ ++ ++ G+ + M+ HGLS Sbjct: 354 AFGIVYAALCAYASKDMKLVIAYSSVSHLGFLVLGLFAFNREGLAGSALHMVNHGLSTGA 413 Query: 355 LFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGS 414 LF G L +R T D+ GGL + L A+A++G+PG NFV E M+L G Sbjct: 414 LFASLGFLMDRYRTTDIAKFGGLMGRYPNFAILFFALALASVGLPGLNNFVSEMMMLAGL 473 Query: 415 FQV------VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQ---IASQELPGMSLREL 465 F + V++ G+ ++ Y ML +F K +S RE Sbjct: 474 FDARSPGLKSLALAVVAATGIFLSAWYVFTMLRAVFFNPLKEPERAAPEAPAGDVSRREF 533 Query: 466 FMILLLVVLLVLLGFYPQPILDTSHSAIGNIQ 497 F L L ++LG PQP+LD + + Sbjct: 534 FAFGSLAALCLVLGLLPQPLLDAMKQDVRKLS 565 >UniRef50_A7H9U2 Proton-translocating NADH-quinone oxidoreductase, chain M n=4 Tax=Anaeromyxobacter RepID=A7H9U2_ANADF Length = 554 Score = 365 bits (939), Expect = 2e-99, Method: Composition-based stats. Identities = 177/557 (31%), Positives = 273/557 (49%), Gaps = 71/557 (12%) Query: 2 LLPWLILIPFIGGFLCWQT----------ERFGVKVPRWIALITMGLTLALSLQLWLQGG 51 +L W P +G ++ R IAL+T GL+ ++ W Sbjct: 8 VLSWATFFPLLGAAAIVVLLAVRFVANLPKKLVDDGARLIALLTSGLSFVAAIAAWRMYD 67 Query: 52 YSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSW----- 106 + T Q WI F I ++ +DGLS+ MV+L+GL+ +A + S Sbjct: 68 PTDT------GVQLAQHFVWIRAFNIEYYVGVDGLSISMVLLSGLISFVATIASMPWWSG 121 Query: 107 -------------------------KEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFF 141 + + + L+ + G++G F+++DMFLF+ Sbjct: 122 AKAAEMAGMVDDDHGHGHDDAHHPKHFSVRMVPGYMVMLLLLQTGMMGTFVSLDMFLFYV 181 Query: 142 FWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVH----- 196 FWE+ML+PMYFLI +WG G + AA KFF+YT A ++ML+AI+ + + Sbjct: 182 FWEVMLLPMYFLIGVWG-----GPRKEYAAIKFFLYTLAGSVLMLLAIIGIYYNSLPAML 236 Query: 197 --YNATGVWTFNYEEL-----------LNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGW 243 + TFN EL + L + FI FA+K+P+ P H W Sbjct: 237 ADGTMSSGHTFNLIELGKQGAQGQFLNAAPILGMQFTKLAFVALFIGFAIKIPMFPFHTW 296 Query: 244 LPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAW 303 LPDAH +APT SV LAG+LLK YG+LRF+ PL P+A+A A GVI I Y A+ Sbjct: 297 LPDAHVEAPTPISVILAGVLLKMGIYGILRFNYPLLPDATAWAANAMAVFGVINIVYAAF 356 Query: 304 MAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLY 363 + Q D+K+LIAY+SVSHMGF L+ + + GAV+ + HG+ + LF++ G +Y Sbjct: 357 VCLGQKDLKKLIAYSSVSHMGFSLLGMAAMTPAGISGAVLNLFTHGIISPMLFLIVGVIY 416 Query: 364 ERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITV 423 +R H R++ GGL +++ A+ A+LG+PG F+ EFM+ G+F V T+ Sbjct: 417 DRAHHREIEKFGGLAAELPEYTAIMGLAFFASLGLPGLAGFIAEFMVFTGAFPVFTTYTI 476 Query: 424 ISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQ 483 IS ++ + Y L +HR + GK + P ++ RE + L + ++LGFYPQ Sbjct: 477 ISATAVIITAAYYLWAIHRMFLGKLNP--VYKGYPDLNWRERISLYPLAAIAIVLGFYPQ 534 Query: 484 PILDTSHSAIGNIQQWF 500 IL + ++ + Q Sbjct: 535 AILGVINRSLHLLIQNI 551 >UniRef50_Q7VRW3 NADH dehydrogenase I chain M n=2 Tax=Gammaproteobacteria RepID=Q7VRW3_BLOFL Length = 509 Score = 365 bits (937), Expect = 3e-99, Method: Composition-based stats. Identities = 269/506 (53%), Positives = 368/506 (72%), Gaps = 12/506 (2%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQ--------GGY 52 MLLP LIL+PF G + WQ++R V +PRWIAL + + LWL Sbjct: 1 MLLPTLILVPFFVGIISWQSDRINVCMPRWIALFGSSMVFVVGFFLWLWRMGYCNNLVLD 60 Query: 53 SLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSW--KEIE 110 +L + W E+ WIPRFGI+ HLA+DGLS+LM++LTG+LGV+AVL SW + Sbjct: 61 NLLKLNKSSVWDLEYMCTWIPRFGINFHLALDGLSVLMLMLTGILGVMAVLSSWENSVTD 120 Query: 111 KYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITA 170 ++G F+ NL+WILG VIGV LA+DMFLFFFFWE++L+P+YFLI++WG++ + K RI A Sbjct: 121 HHKGLFYCNLLWILGSVIGVILAVDMFLFFFFWEIVLIPIYFLISIWGYEELNKKLRIIA 180 Query: 171 ATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIA 230 ATKF +Y Q SGL MLI+I+ LV+ +Y G+W+F+YE LL+ + +EY LMLGFF A Sbjct: 181 ATKFCLYAQLSGLCMLISIIILVYFNYRLYGIWSFDYENLLHVTLPKNIEYFLMLGFFCA 240 Query: 231 FAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIA 290 FA+KMP+VP H W +A++ +P GSVDL G L+K + YG RF LPL PNAS EF PIA Sbjct: 241 FAIKMPIVPFHTWSLEAYAYSPITGSVDLIGFLVKISIYGFFRFVLPLCPNASKEFVPIA 300 Query: 291 MWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGL 350 M+LG++ IFYGAWMAFAQTD KRLIAY+++SHMGF LIAIY+ QL+YQG ++QMI+ L Sbjct: 301 MFLGILNIFYGAWMAFAQTDFKRLIAYSNISHMGFALIAIYSNDQLSYQGVLVQMISCSL 360 Query: 351 SAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMI 410 + +G+ ILCGQLY+R++TR++ +MGGLW +M +PA L F V+ L +PGTGNF+GE I Sbjct: 361 TLSGMCILCGQLYKRLYTRNITVMGGLWGRMNLMPAFFLCFIVSMLSIPGTGNFIGEVTI 420 Query: 411 LFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILL 470 L GSF VP+IT+I++FG++FAS+YSL ++ R Y+GK SQI+ + L M+ E F+I++ Sbjct: 421 LLGSFHTVPIITIIASFGILFASIYSLVLMQRIYYGK--SQISCEILLDMTFLEKFIIIV 478 Query: 471 LVVLLVLLGFYPQPILDTSHSAIGNI 496 L++ ++++G +PQ I DTS I NI Sbjct: 479 LLLCVLIVGCFPQFIFDTSRETIRNI 504 >UniRef50_C5AJH4 Proton-translocating NADH-quinone oxidoreductase, chain M n=31 Tax=Bacteria RepID=C5AJH4_BURGB Length = 517 Score = 364 bits (935), Expect = 5e-99, Method: Composition-based stats. Identities = 161/502 (32%), Positives = 262/502 (52%), Gaps = 21/502 (4%) Query: 3 LPWLILIPFIGGFLCWQTER-FGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 L I P + G + RW+AL+ + L L++ L T Sbjct: 7 LSLAIWTPIVFGVAVLRIGSDRYPHRARWLALVGAIVGLLLTVPLVAGFDAHNTAV---- 62 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q PW+ FG + + +DGLSL +VVL+ ++ V+ SW+ + +H + + Sbjct: 63 --QFTEYKPWLSAFGSAWRMGVDGLSLWLVVLSAFTTLVIVIASWESVTTRVAQYHGSFL 120 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + G +IGVF ++D LFF F+E L+P++ LI WGH R AA KFF + A Sbjct: 121 ILSGLMIGVFTSLDGMLFFIFFEATLIPLFVLIGTWGH-----ANRSYAAIKFFFISFAG 175 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 L L L + Y TF+ + + L+ LGFF AFAVK+P+ P+H Sbjct: 176 SL------LMLAAMLYLFGLTHTFDMAVWQQARLGFAPQLLVFLGFFAAFAVKVPMWPVH 229 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WL D ++ PT +V L ++K YG LRF+LP+ P+A+ AP+ + L ++ + Y Sbjct: 230 TWLQDVYTDGPTGAAVSLG--MIKIGGYGFLRFALPIAPDAAHYLAPVRIGLSLVAVVYA 287 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 + +A AQ D+ +++AY+SV+HMG V + ++ Q++ GA++QMI++G A +F+ G Sbjct: 288 SLLALAQKDMAKMLAYSSVAHMGLVTLGVFLFDQMSITGAIVQMISYGFVAGAMFLCVGA 347 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 LY+R TR + G+ + M L ++ F++A +G+PGT FVGEF+++ G+ +V I Sbjct: 348 LYDRTRTRAIAEYSGVANTMPRLALFAVLFSMANVGLPGTSGFVGEFLVIMGAVRVNFWI 407 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 I+ L+ ++ Y+L ML R FG K +L +S RE + L V+++ +G Y Sbjct: 408 GAIAALTLILSAAYTLWMLKRVIFGAIKHDRVG-KLIDLSRRESVVFAALAVIVLAIGIY 466 Query: 482 PQPILDTSHSAIGNIQQWFVNS 503 P+P D A +I + Sbjct: 467 PKPFTDVIDPAAASIVAQLERA 488 >UniRef50_C8XBD3 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XBD3_NAKMY Length = 588 Score = 363 bits (933), Expect = 8e-99, Method: Composition-based stats. Identities = 160/454 (35%), Positives = 250/454 (55%), Gaps = 12/454 (2%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L LI +P +G + K + IAL+ LA+ + LW+ + T +A Sbjct: 6 LVVLIFLPVVGALVLAAMSGAPEKTVKLIALVFSLAELAVVVALWMSYRAATTDAASQLD 65 Query: 63 WQS--EFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI---EKYQGFFH 117 F + WIP FGI+ L +DG+SL M+ L +L + + SW+E + G + Sbjct: 66 VPFRETFSVTWIPYFGINFSLGVDGISLTMIALIAVLMPIVLGASWEEKLPAGRTIGGYF 125 Query: 118 LNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIY 177 L+ + G ++GVF A ++F+F+ +E+ML+PMYFL+ +G G R AATKFF+Y Sbjct: 126 ALLLVLQGAMVGVFAATNVFVFYVMFEVMLIPMYFLVGAFG-----GVRRAYAATKFFLY 180 Query: 178 TQASGLVMLIAILALVFVHYNATGVWTFNYEELL--NTPMSSGVEYLLMLGFFIAFAVKM 235 + GL+ML +++ L G TF++ L + + + GF IAFA+K Sbjct: 181 SLLGGLLMLASVIGLYVASGQVLGQGTFDWVTLQSIAAQIPESTQMWIFAGFAIAFAIKA 240 Query: 236 PVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGV 295 P+VPLH WLPDA ++AP L G+L K +G LR LPL P AS++ A + + L V Sbjct: 241 PLVPLHTWLPDAGTEAPVGAGTLLVGVLDKVGTFGFLRICLPLLPAASSKLAWLIILLAV 300 Query: 296 IGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGL 355 IGI YGA +A QTD+KR + +TS++H GF+ + ++ + + GA + M+ HG++ L Sbjct: 301 IGILYGAIVAAGQTDLKRFVTFTSIAHFGFIALGVFAFTTQSIAGAALYMVNHGIATGLL 360 Query: 356 FILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSF 415 F++ G L R ++ + GG+W L L A+AT+ MPGT +F+ EF++L G+F Sbjct: 361 FLIVGMLTARGGSKLVGDYGGVWKVAPILGGFFLVAALATIAMPGTNSFISEFLVLIGTF 420 Query: 416 QVVPVITVISTFGLVFASVYSLAMLHRAYFGKAK 449 P V++T G+V A+VY L + R G + Sbjct: 421 SRHPAWAVLATIGIVLAAVYMLWIFQRTMTGPVR 454 >UniRef50_D2QSX5 Proton-translocating NADH-quinone oxidoreductase, chain M n=3 Tax=Sphingobacteriales RepID=D2QSX5_9SPHI Length = 492 Score = 360 bits (926), Expect = 5e-98, Method: Composition-based stats. Identities = 165/509 (32%), Positives = 267/509 (52%), Gaps = 18/509 (3%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 ML +LIL P + L + K +A + + + Sbjct: 1 MLTLFLILFPAVAATLIFFFGGERAKQAALLAALAELACAGYAFFSF----------KPD 50 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 Q FD PWI GI + IDG+S+L+V+LTGLL VL ++ K F+ + Sbjct: 51 ASSQFAFDYPWIGSLGIRLSAGIDGISVLLVLLTGLLVPFIVLSTFNRTYKQPTTFYALM 110 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 +++ ++GVF A D FLF+ F+E L+P+YFL A+WG G+ RI KFF+YT Sbjct: 111 LFMQAALMGVFTARDGFLFYLFFEAALIPIYFLAAMWG-----GENRIPVTFKFFVYTIF 165 Query: 181 SGLVMLIAILALVFVHY-NATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 L MLIA++ L + A + + ++ E L FFIAFA+KMPV P Sbjct: 166 GSLFMLIALVYLYYQTPPTAVAAHSSAIADFYKLNLTPQAENWLFWAFFIAFAIKMPVFP 225 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 H W PD + ++PT ++ LAGI+LK YGL+RF LP+ P + A+ L VIGI Sbjct: 226 FHTWQPDTYVESPTPATMLLAGIMLKMGVYGLIRFILPIVPLGVETWGKTAIILSVIGIV 285 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 YGA +A Q D+KRLIAY+S SH+G + +++ ++ QGA+IQM+AHG++ G+F + Sbjct: 286 YGAIIAIRQRDMKRLIAYSSFSHVGLMAAGVFSQTETGMQGALIQMLAHGINVVGMFFVA 345 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP 419 ++ R TR + +GG+ L + + ++ +P T FVGEF++L G + Sbjct: 346 DVIFSRTSTRQLDQLGGITQSTPKLTVYFMIMLLGSVALPLTNGFVGEFLLLHGVYTFNH 405 Query: 420 VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLG 479 + + + F ++F +VY L M ++ FG S+ ++ ++ E ++ + LVV++ +G Sbjct: 406 YLGLAAGFTIIFGAVYMLRMFQKSMFGPTTSR--TESFTDLTTSESWVFIPLVVMVFWIG 463 Query: 480 FYPQPILDTSHSAIGNIQQWFVNSVTTTR 508 YP L + A+ N+ ++ + + + Sbjct: 464 IYPHTFLKVTEPAVANLMKYIGTTAVSMK 492 >UniRef50_C4XMN2 NADH-quinone oxidoreductase chain M n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XMN2_DESMR Length = 493 Score = 360 bits (926), Expect = 5e-98, Method: Composition-based stats. Identities = 187/502 (37%), Positives = 283/502 (56%), Gaps = 15/502 (2%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L +I P + + R R A++ LAL + +AG Sbjct: 7 LSLIIFWPLVAACVMPAL-RGDAAACRRFAVLAALGELALCALIAGLF------AAGSFG 59 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMW 122 + D WIP FGI L++DGLSL+ VVLT L+G+ +L S + + +H ++ Sbjct: 60 PELVEDAAWIPSFGIRYSLSLDGLSLIFVVLTALIGLCCMLASRHDDRERPALYHGLILA 119 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 L V G+FLA D+FLF FWE L+P++FLI ++GH ++ A KFF+++ G Sbjct: 120 SLTTVQGIFLASDVFLFALFWEAQLIPVFFLIGVFGHG-----DKLRVAMKFFLFSATGG 174 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 L+M +A++AL + NA F E L + V L F ++FA+K+P+VP+H Sbjct: 175 LLMFLAVIALGVLSANAPDGPNFALEALTRLDIPQNVGRWLFAAFVLSFAIKIPLVPVHM 234 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGA 302 WLPDAH++APTAGS+ LAG+LLKT Y L+RF+LPLFP A+ FAP LG++G+FY + Sbjct: 235 WLPDAHTEAPTAGSLILAGLLLKTGGYALIRFALPLFPEAAHAFAPALTVLGLVGLFYAS 294 Query: 303 WMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQL 362 +A AQ D+KRLIAY+S+ HMG + A+ +GS+LA GAV+ M++H L++ GLF L G + Sbjct: 295 AVAVAQEDVKRLIAYSSIGHMGLAVAAMVSGSRLALGGAVLLMVSHALTSGGLFSLAGAI 354 Query: 363 YERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVIT 422 ER+ +R ++GG+W+K A LF +A+ +PG FVGE MI+FG F+V + Sbjct: 355 GERLGSRRFDILGGIWNKAPHFGAAFLFCVLASAALPGLSGFVGEAMIVFGLFKVNVLAA 414 Query: 423 VISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYP 482 ++ G+ VY L + +G +S + P + RE ++ LL V +V LG +P Sbjct: 415 GLAVAGMAATLVYLLRLARDVLYGPPRS---AVPFPDLDAREAVLLSLLAVGIVWLGLFP 471 Query: 483 QPILDTSHSAIGNIQQWFVNSV 504 P+L + + I + Sbjct: 472 GPVLGLAAEPLNAIAARVWPGL 493 >UniRef50_C1ZAS9 NADH dehydrogenase subunit M n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZAS9_PLALI Length = 559 Score = 360 bits (925), Expect = 7e-98, Method: Composition-based stats. Identities = 181/540 (33%), Positives = 271/540 (50%), Gaps = 44/540 (8%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 L+ + +P + G + V RW AL LA+++QL + S + Sbjct: 8 LMSCALFLPVLWGLGLFGFPSRAVSAIRWYALAGACCELAITVQLAGIALGWIDASPAVN 67 Query: 62 --------QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQ 113 +PWIP + ++ L +DG SL +++LT L+ VL+++ SW I+ + Sbjct: 68 ASTTSLRNDILLGMSLPWIPTWNVNYSLGVDGFSLPLILLTSLIFVLSIVASWS-IKTHI 126 Query: 114 GFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATK 173 F L+ + GV+GVFLA+D FLFF WE+ML+PMYFLI LWG G R AA K Sbjct: 127 RGFLFLLLLLETGVMGVFLALDFFLFFVMWEVMLLPMYFLIGLWG-----GPRREYAAIK 181 Query: 174 FFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEE----------------LLNTPMSS 217 FF+YT A G+ +L+A+L + + + L + Sbjct: 182 FFLYTLAGGVCLLMAMLMVYSASGGSFDLLELARMAQGQAPKPGMDLDQGIALTAAMGDT 241 Query: 218 GVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLP 277 +++ + + IAF +K+P VPLH WLPDAH +APT S+ LAGILLK YG LR ++P Sbjct: 242 SLQWRVFVLLLIAFLIKLPAVPLHTWLPDAHVEAPTPVSMILAGILLKLGGYGFLRIAIP 301 Query: 278 LFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYT----- 332 + P AE+A + LGV + YGA A AQ+D KRL+AY+SVSHMG+VL+ + Sbjct: 302 ICPLGFAEWAWFMVALGVFCVLYGALAALAQSDFKRLVAYSSVSHMGYVLMGLGAFRFQE 361 Query: 333 ---------GSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKW 383 S + A QM+AHG+ +AG+F + G LY+R+ RD+R GG+ S Sbjct: 362 LTGVVLNPDFSTMGLSAATFQMVAHGIVSAGMFFVVGVLYDRVKHRDLRQFGGIASLQPH 421 Query: 384 LPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRA 443 A++ A LG+PG F+GE +F + V +V G++ + Y L L R Sbjct: 422 FSAIAAGIFFAGLGLPGLCGFIGEAFSIFSVWHVDRFFSVGGALGMILTAGYILWALQRV 481 Query: 444 YFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNS 503 Y G + + L ++ RE + +L+ + LG YP L+ A + Q S Sbjct: 482 YLGPTYTGPNREYLTEINFREYTVGYILLAFAIGLGVYPAMALNVIEPASRQLVQQISGS 541 >UniRef50_UPI00019790B7 NADH dehydrogenase subunit M n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI00019790B7 Length = 528 Score = 360 bits (924), Expect = 9e-98, Method: Composition-based stats. Identities = 159/508 (31%), Positives = 268/508 (52%), Gaps = 20/508 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL +I P L + + R A++ L L + LW + + Sbjct: 4 LLNIVIFFPAFAALLLYVLKGEN---SRIFAILVGILELLFVVLLWNEFNVNY------G 54 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q I + IS + IDG+SL ++ L + +L L +K + + ++ Sbjct: 55 GIQLSTHYELISSYNISYFVGIDGISLFLLTLNAFITLLT-LYFFKYLRTP---LIIAIL 110 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 ++ V+GVF A+D+ +F+ FWE+ L+P+ ++I +WG G+ RI A+ K+F+YT + Sbjct: 111 FLESIVMGVFSALDVMMFYIFWELSLLPVLYIIGVWG-----GERRIYASIKYFLYTFGA 165 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 L+ML+ IL + ++ G W+FN + + + L + FFI AVK+P+ PLH Sbjct: 166 SLIMLVGILYFAYQYFLIMGAWSFNLIDWYQISLDIDTQKWLFVAFFIGMAVKIPIFPLH 225 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 W P A++QAP GSV L+ +L K YGLLR LPLFP S+ + + V + YG Sbjct: 226 SWQPHAYTQAPLVGSVLLSAVLSKMGTYGLLRLVLPLFPFTSSNISLFIGLVCVFMVVYG 285 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 A++A AQT++K +AY+S+SHMG +++ I++ + GAV M+AHG+ LF+L G Sbjct: 286 AFIALAQTNLKTFLAYSSLSHMGIIVLGIFSLNTEGLSGAVFFMVAHGVVVGALFMLVGV 345 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 L R T+D++ + GL M ++ + +L +P T FVGE + L+G FQV P+I Sbjct: 346 LQTRTQTQDLQDVQGLAHSMPKYSSVFGIVMMCSLALPLTMGFVGEVLSLYGFFQVNPII 405 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 ++ ++Y L M + +FG A + + L ++LRE + + ++V+++ LG Y Sbjct: 406 AFLAGSSFFVGAIYMLTMFRKVFFGSALPKYTT--LKDLNLREKIVFIPILVIIIWLGVY 463 Query: 482 PQPILDTSHSAIGNIQQWFVNSVTTTRP 509 P+P+L ++ + Q + T P Sbjct: 464 PKPLLTPISTSAETLSQVIAAKIQLTNP 491 >UniRef50_A1T694 Proton-translocating NADH-quinone oxidoreductase, chain M n=9 Tax=Actinomycetales RepID=A1T694_MYCVP Length = 526 Score = 359 bits (922), Expect = 2e-97, Method: Composition-based stats. Identities = 163/519 (31%), Positives = 270/519 (52%), Gaps = 28/519 (5%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L L +P +G + + +W+AL + L ++ + + + Sbjct: 7 VLTALWAVPMVGAVVVMLLPAAARGLAKWVALSVSLIVLGVAAVIAVGFDPAG------D 60 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF------ 115 Q+Q + WIP FG L +DG++L +VVLT +L L ++ W + + Sbjct: 61 QFQFVENYRWIPSFGTGYILGVDGIALALVVLTAVLLPLLIMAGWNDARDELSWGGRSVH 120 Query: 116 -FHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKF 174 + ++ + G V+ +++D+ LF+ F+E ML+PMYFLI +G G R AA KF Sbjct: 121 IYFALILAVEGMVLISLVSLDILLFYVFFEAMLIPMYFLIGGFG-----GADRSRAAVKF 175 Query: 175 FIYTQASGLVMLIAILALVFVHYN--ATGVWTFNYEELLNTP------MSSGVEYLLMLG 226 +Y GL+ML +++ L A TF++ ++ ++ V +LL G Sbjct: 176 LLYNLFGGLIMLASVVGLYVATAGSDAFDAGTFDFRAIVAAVAGGEFVVNPVVMHLLFGG 235 Query: 227 FFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEF 286 F AFAVK P+ P H WLPDA +A A +V + I+ K +G++R+ LPLFP++++ F Sbjct: 236 FMFAFAVKAPLWPFHRWLPDAAVEATPASAVLMMAIMDKVGTFGMIRYCLPLFPDSASYF 295 Query: 287 APIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMI 346 + + + L VIGI YGA +A QTD+ RLIAYTS+SH GF+++ I+ + G+ + M+ Sbjct: 296 SGLIITLAVIGIVYGAVVAIGQTDVMRLIAYTSISHFGFIILGIFVMTTQGQSGSTLYMV 355 Query: 347 AHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVG 406 HG+S A LF++ G L R +R + GG+ L L +ATL +PG F+ Sbjct: 356 NHGISTAALFLIAGFLVSRRGSRLINAYGGVQKLAPVLAGTFLVAGLATLSLPGLAPFIS 415 Query: 407 EFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQI--ASQELPGMSLRE 464 EF++L G+F PV V++ LV +++Y L M R G A + ++ + RE Sbjct: 416 EFLVLIGTFTRYPVFAVLAASALVLSAIYVLWMYQRMMTGPAPLSLVEGEHKIRDLVPRE 475 Query: 465 LFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNS 503 + ++ L+ LL++LG YP+P LD + A+ + Sbjct: 476 IAVVAPLIALLLVLGVYPKPALDVINPAVTHTLTTIEQP 514 >UniRef50_O47497 NADH-ubiquinone oxidoreductase chain 4 n=50 Tax=Metazoa RepID=NU4M_METSE Length = 491 Score = 358 bits (921), Expect = 2e-97, Method: Composition-based stats. Identities = 171/482 (35%), Positives = 259/482 (53%), Gaps = 24/482 (4%) Query: 17 CWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFG 76 + R + AL TL +L LW Q+Q+ WI Sbjct: 22 VMRVPRDNSVKLKRTALEWSLATLTATLILWAAFDME-------GQFQTINQTEWIVPPA 74 Query: 77 ISI-----HLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVF 131 ++ LA+DG+SL ++LT LL + +L SW I+ F L L+++ ++GVF Sbjct: 75 LNFKWGPLFLAVDGISLFFLILTALLTPICILISWNSIKFLLKEFLLCLLFLEVLLMGVF 134 Query: 132 LAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILA 191 A+D+ LF+ +E +L+PM+ LI +WG + ++ A+ FF YT + ML+ I Sbjct: 135 SALDLLLFYILFEGILIPMFLLIGVWGS----REEKVRASYYFFFYTFVGSVFMLLGIFQ 190 Query: 192 LVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQA 251 L + V T +Y+ LLN + + + GFF++ AVK+P VP H WLP AH +A Sbjct: 191 LY------SSVGTTDYQALLNIELPISTQKWIFAGFFLSLAVKIPQVPFHIWLPQAHVEA 244 Query: 252 PTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDI 311 P +GSV LAGILLK YG LRF+ P+ P A+ FAP + L VI I YG+ Q D+ Sbjct: 245 PVSGSVILAGILLKLGGYGFLRFTWPILPAATEYFAPFVIMLSVIAIIYGSLTTCRQVDL 304 Query: 312 KRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDM 371 KRLIAY+SV+HMG V + ++T + AV M+AHGL ++ LFI LYER HTR + Sbjct: 305 KRLIAYSSVAHMGLVTLGLFTHTIEGLVAAVFMMLAHGLVSSALFIAVTYLYERHHTRLI 364 Query: 372 RMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVF 431 + G+ M ++ L + + +P + NFV EF L +F+ VI V++ G+V+ Sbjct: 365 KYYRGITFSMPIFVSVFLVLTLTNMAIPLSCNFVAEFFSLLAAFEYNIVIGVLAATGMVW 424 Query: 432 ASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHS 491 ++ YSL + +R FG + + + ++ REL I LV+L+ +LG P I+D + Sbjct: 425 SAAYSLYLYNRVSFGASSNYLLF--TRDLNRRELIAISPLVILIFILGVLPSLIIDPVKN 482 Query: 492 AI 493 AI Sbjct: 483 AI 484 >UniRef50_Q3Z7Z2 Proton-translocating NADH-quinone oxidoreductase, M subunit n=5 Tax=Dehalococcoides RepID=Q3Z7Z2_DEHE1 Length = 497 Score = 358 bits (921), Expect = 2e-97, Method: Composition-based stats. Identities = 177/505 (35%), Positives = 270/505 (53%), Gaps = 18/505 (3%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L + +P G L R + + +L+ + L LSL ++ S + + Sbjct: 6 LTLITFLPAAGAILMALWPRLSGRAIKISSLLLTLVPLVLSLVVFAGFDRSSSMA---GV 62 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMW 122 Q E ++PWI + HL +DGLSL +VLT LLGVLAVL SWK ++ F + L+ Sbjct: 63 IQFEENLPWISLLNANYHLGVDGLSLPFLVLTTLLGVLAVLISWK-VDLRIKEFFVWLLI 121 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 + + GVF+++D+ LFF FWE+ L+PMYFLI++WG + +A K+ +YT G Sbjct: 122 LQTSITGVFVSLDLLLFFIFWELELIPMYFLISIWG-----AGRKEYSALKYVLYTLFGG 176 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 +L IL L F + + + LN + + L FFI FA+K+P P H Sbjct: 177 AFILAGILILFFATGSLDIASLASTD--LNNFLRPAMMVLTFFMFFIGFAIKLPAFPFHT 234 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGA 302 WLPDAH+ APTA SV LAG LLK Y +LR ++ +FP+ ++AP+ + + VI + YGA Sbjct: 235 WLPDAHTDAPTAASVILAGTLLKMGGYAMLRLNVAMFPDVCRDWAPLILTIAVINVIYGA 294 Query: 303 WMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQL 362 + QTDIKRLIAY+SVSHMGFVL+ I+T +++ GAV+QM +HG+ LF + G + Sbjct: 295 AITLKQTDIKRLIAYSSVSHMGFVLLGIFTLGEISMNGAVLQMFSHGIITGLLFAITGVV 354 Query: 363 YERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVV---- 418 H RD+ +GGL +M + + + + +P T F+ E + GSFQ Sbjct: 355 MHNTHERDINKLGGLAKQMPRTAIIFILAGLGAMAVPATSGFIAEVSVFLGSFQSSVVPG 414 Query: 419 -PVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVL 477 V T++ GLV A+ Y L + R + G + Q + E+ L+ +V++ Sbjct: 415 GQVFTMLCLLGLVLAAAYILWTVQRVFLGPGLEKF--QMVKDADKTEIVFSLVFLVVMFG 472 Query: 478 LGFYPQPILDTSHSAIGNIQQWFVN 502 +G YPQ I+D + + + F Sbjct: 473 VGLYPQIIVDVIQTGVAPLAAVFGG 497 >UniRef50_Q67KP5 NADH dehydrogenase I subunit M n=1 Tax=Symbiobacterium thermophilum RepID=Q67KP5_SYMTH Length = 508 Score = 358 bits (919), Expect = 4e-97, Method: Composition-based stats. Identities = 170/511 (33%), Positives = 266/511 (52%), Gaps = 20/511 (3%) Query: 2 LLPWLILIPFIGGFL-CWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 +L +I +P + + + + ++ W+A I + AL+L L Q + +A Sbjct: 1 MLSLIIFVPLVFALVMLFFVPKTQERLLYWLAGIGTLIPFALALVLAAQWPTAEVSTAPY 60 Query: 61 P-QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLN 119 + +PWI G+ L +DG + M++L+ LL LAVL S+ I+ + + Sbjct: 61 AQGMRFVTHVPWIQAIGVHYTLGVDGFAFTMLLLSTLLFPLAVLASYGYIKDRVKDYLVL 120 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 L+ + G GVF +D LF+ FWE++L+PMYFLI +WG G+ R AA KFF+YT Sbjct: 121 LLILATGTNGVFATLDFMLFYVFWEIVLLPMYFLIGIWG-----GERREYAAIKFFLYTL 175 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 VML+ + L T + +G+ + FAVK+P+ P Sbjct: 176 IGSTVMLVGAIYLYVATGVGTFNL-LQMAAASSKLPITGLTTFAFFALLVGFAVKVPMFP 234 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 H WLPDAH +APT S+ LAGILLK +Y ++R S P+ P + ++A + GV+GI Sbjct: 235 FHTWLPDAHVEAPTPISMLLAGILLKLGSYAMVRISHPMLPQLATKYADLLFVFGVVGIL 294 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQL----------AYQGAVIQMIAHG 349 Y A A AQ D K+ +AY+SV+HMGF ++A+ S+L A QG IAHG Sbjct: 295 YAALAAMAQKDFKKQVAYSSVNHMGFFIMALAAASKLAPTSPELAQVALQGGYFVTIAHG 354 Query: 350 LSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFM 409 L + F G YER HTRD+R +GG++ + + + F A A LG+PG F+GEF+ Sbjct: 355 LISPLFFFAVGMFYERTHTRDLRKLGGMFLTIPVVSFATAFVAFANLGLPGLAGFIGEFI 414 Query: 410 ILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMIL 469 L GS+ + +++ G+V + + L + G+AK + Q L ++L+E + Sbjct: 415 SLTGSYPAFGLWVLVAGLGMVITAAWHLLTMRNVLLGEAKPEY--QGLADITLKEKIIFA 472 Query: 470 LLVVLLVLLGFYPQPILDTSHSAIGNIQQWF 500 L VL+V G YP+P++ S++ + Q Sbjct: 473 PLAVLIVFFGVYPRPVMALLQSSVEVLTQVM 503 >UniRef50_C1F9D1 NADH dehydrogenase I, M subunit n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F9D1_ACIC5 Length = 505 Score = 357 bits (917), Expect = 5e-97, Method: Composition-based stats. Identities = 172/507 (33%), Positives = 266/507 (52%), Gaps = 17/507 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L + +P G + R G ++ +W AL+ T L+L L Y P Sbjct: 6 ILSLMTFLPAAGAVVVALLPRKG-RLIQWWALLVSLATFLLTLHLPAHFQYG------RP 58 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 +Q E ++PWI I+ H+ +DGLS+ +VVLTG L + VL SWK IE F+ + Sbjct: 59 GFQFEVNIPWILHPAINYHIGVDGLSMWLVVLTGFLAPIGVLVSWKAIETRTKEFYFLFL 118 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 +IGVF+++D+FL++ FWE+ LVPM LIA++G AA KFF+YT Sbjct: 119 LQQTAMIGVFISLDLFLYYGFWELTLVPMAILIAMFG-----RSRGPRAAIKFFLYTFIP 173 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 + L+AIL L T + + S + L F +AFAVK+PV PLH Sbjct: 174 SALFLVAILWLYARTG--TFDYEKLQASIATGGFSPQALIWVSLAFLLAFAVKVPVFPLH 231 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 GWL D ++APTA ++ +AG K Y +LRF+L LFP S EFAP + L VIG+ YG Sbjct: 232 GWLGDGIAEAPTAMAMVIAG---KLGLYSILRFNLGLFPEQSREFAPWMIALAVIGLIYG 288 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 A +A Q D+KRL+AY+ +S + F + I+ S GAV Q+I G+S L +L G Sbjct: 289 ALVALVQKDMKRLVAYSILSQLSFCTLGIFCFSLTGLDGAVYQIINEGVSGGALLVLLGI 348 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 LYER T ++ GGL ++ + L + ++ +G+P FVGEFM+L GSF Sbjct: 349 LYERYGTFEIAQYGGLSKRLPHMATLYVITTLSLIGLPILNGFVGEFMVLSGSFPGHHGW 408 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 VI+T G++ ++ Y L M+ R ++G + + + ++ REL + +++L+V++G Sbjct: 409 VVIATLGVILSASYMLWMIQRVFYGPESALVQGRATFDVTGRELITVWPMILLMVVMGVA 468 Query: 482 PQPILDTSHSAIGNIQQWFVNSVTTTR 508 + + + + + Sbjct: 469 SPYWIKAIDGGMKPLANVPTMTGSIAN 495 >UniRef50_D2M1W1 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2M1W1_BACS4 Length = 504 Score = 356 bits (915), Expect = 1e-96, Method: Composition-based stats. Identities = 182/512 (35%), Positives = 279/512 (54%), Gaps = 23/512 (4%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L WL+ +P G L + + R IA T L L +SL +W + Sbjct: 5 ILTWLVFLPLAGALLILTVPKENKNLVRSIATGTSILALVVSLVVWGMFDRANPDMQMNH 64 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 +Q + I+ HL +DGLS ++VLT ++ L++ S+ I+ F++ + Sbjct: 65 FFQWFD----LGFLQINYHLGVDGLSAPLLVLTTIVTTLSIFASFT-IQNRVKEFYVWTL 119 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 +L G++GVF+A+DMFLFF F+E+ L+PM+F+IA+WG GK + AA KF +YT Sbjct: 120 VLLTGMLGVFVALDMFLFFLFFELTLIPMFFIIAIWG-----GKAKEYAAFKFLLYTGLG 174 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELL----NTPMSSGVEYLLMLGFFIAFAVKMPV 237 +M I +A+ +V A+G TFN L N +SS V+ L L F+AFAVK+P+ Sbjct: 175 SAIMFITFIAMYYVALQASGYATFNMIVLADIFANVEVSSTVKAGLFLALFVAFAVKLPI 234 Query: 238 VPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 P H WLP+AH +APTA S+ LAG+LLK YGL+R + +FP+ +A FA + LGV+ Sbjct: 235 FPFHTWLPNAHVEAPTAASMILAGVLLKMGGYGLIRIGIGVFPDQAARFATLIALLGVVN 294 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 I YGA +A QTD+KRL+A++S+SHMG VL+ I + ++ QGA+ Q+++HG AA LF Sbjct: 295 IIYGALLALVQTDLKRLVAFSSISHMGIVLLGIASFTESGMQGAIFQLVSHGFIAALLFF 354 Query: 358 LCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSF-- 415 + G +YER TR + +GGL + L L A+A++G+PG FV E + G F Sbjct: 355 MVGAIYERTKTRTISELGGLSKSIPILAGFMLAAAMASVGLPGLSGFVSELLAFIGIFGA 414 Query: 416 -----QVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILL 470 VI G++ + Y L + R FG+ + +EL E ++ Sbjct: 415 DASILPAAAWFGVIGGIGIILTAAYLLWAMQRTTFGQLDDKY--KELKDARPLEYIPMIG 472 Query: 471 LVVLLVLLGFYPQPILDTSHSAIGNIQQWFVN 502 L+ +L+G YP + D + + +I Sbjct: 473 LLAFSLLIGVYPNILSDVINITVIDIVSKIGG 504 >UniRef50_B7K6C0 Proton-translocating NADH-quinone oxidoreductase, chain M n=6 Tax=Chroococcales RepID=B7K6C0_CYAP8 Length = 523 Score = 355 bits (911), Expect = 3e-96, Method: Composition-based stats. Identities = 160/506 (31%), Positives = 256/506 (50%), Gaps = 22/506 (4%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPR-WIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 +L +L+ +P +G + V + + + A ++ L Q S + Sbjct: 1 MLSFLLWLPILGAIIIGFFPAKLSSVQWKRLTTVLAVVVFAATIWLVTQFDLSHS----- 55 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 Q PW G+S LAIDGL L ++ L + + S E + ++ Sbjct: 56 -GLQFREYFPWAKPIGLSYSLAIDGL-SLPLLALNSLLTIIAIYSIGENVERPRLYYALT 113 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + I G+ G +A ++ LF F+E+ L+P Y +IA+WG G+ R A+ KF +YT Sbjct: 114 LLINAGITGALVAQNLLLFVIFYELELIPFYLMIAIWG-----GEKRGYASVKFLLYTAL 168 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 SGL++L L + F+ +G F+Y+ + +S + +L+ I F +K+P+VPL Sbjct: 169 SGLLVLAGFLGIGFL----SGATNFDYDTISTQGLSLNTQLILLTALLIGFGIKIPLVPL 224 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H WLPDA+++A A ++ L GIL K YGL+RF L LFP A +P +G I + Y Sbjct: 225 HTWLPDAYTEASPAVAILLGGILAKLGTYGLIRFGLQLFPQAWHLISPGLAIIGTISVLY 284 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 GA A AQ DIKR++AY+S+ HMG++L+A G+QL+ GAV QMI+HGL A LF L G Sbjct: 285 GALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSILGAVAQMISHGLILALLFHLVG 344 Query: 361 QLYERIHTRDMRMMGGLW---SKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV 417 + ++ TRD+ ++ GL + AL + +A+ G+PG FV EF++ GSF Sbjct: 345 IVERKVGTRDLDVLNGLMNPIRGLPLTSALLVMAGMASAGIPGLVGFVAEFIVFQGSFTT 404 Query: 418 VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVL 477 P+ + +VY + +L+R FGK +++A P + E L +L++ Sbjct: 405 FPIPILFCIIASGLTAVYFVILLNRTCFGKLDNKLAYY--PPVLKSESIPAFALTILILF 462 Query: 478 LGFYPQPILDTSHSAIGNIQQWFVNS 503 LG P +L + + Sbjct: 463 LGIQPNWLLRWMEPTTDVLASQINQT 488 >UniRef50_D2RZ76 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RZ76_9EURY Length = 509 Score = 354 bits (909), Expect = 6e-96, Method: Composition-based stats. Identities = 177/515 (34%), Positives = 266/515 (51%), Gaps = 27/515 (5%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 M++ LI + IG + + +V +A + ALSL ++ S Sbjct: 1 MMIEALIAVALIGALVTFVAP---NRVAGKLAFAISLVPAALSLWMFTAFDGSGNALLD- 56 Query: 61 PQWQSEFDMPWI--PRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHL 118 + E + WI + I + +DG+SL +VV+T +L LA+L SW I+ + F+ Sbjct: 57 GELAFESHLEWIQFGDYSIEWFVGLDGISLPLVVMTTILCTLAILSSWTPIDSRESQFYG 116 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 +++I +IGVF A+D F++F FWE +L+PMY LI +WG G R AA KFF+YT Sbjct: 117 LVLFIEANLIGVFSALDFFVWFIFWEAVLIPMYLLIGVWG-----GPDRKYAAIKFFVYT 171 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPM-----------SSGVEYLLMLGF 227 + LVM + +ALVF +A + L+ + Sbjct: 172 NVASLVMFGSFIALVFGLGDAATSFALPDIADAMVNGGGVQSSVFGIDPGTFTALVFIAM 231 Query: 228 FIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFA 287 F+ FAVK+PVVP H WLPDAH QAPT SV LAG+LLK Y LLRF+ +FP A +A Sbjct: 232 FLGFAVKVPVVPFHTWLPDAHVQAPTPASVLLAGVLLKMGTYALLRFNFTMFPEQVATYA 291 Query: 288 PIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIA 347 + VI + YGA +A AQTD+KR++AY+SVS MG+V++ + +Q GA QM++ Sbjct: 292 VPIAAIAVISVIYGAMLALAQTDLKRIVAYSSVSSMGYVILGLIAYTQFGVGGATFQMVS 351 Query: 348 HGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGE 407 HGL + +F+ G +Y HTR + M GL +M + + A +G+P F GE Sbjct: 352 HGLISGLMFMSVGVIYNVTHTRSVEEMSGLADRMPIAVGILVAGAFGYMGLPLMSGFHGE 411 Query: 408 FMILFGSFQV----VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLR 463 F I FG+FQ P+ T ++ FG+V + Y L L R FG + ++ L Sbjct: 412 FTIFFGAFQADFAYAPLFTALAMFGIVIVAGYLLFALQRTVFGPYHLE-TDYDVGRAPLH 470 Query: 464 ELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQ 498 ++ + +L+ L++ LG P+ I D A+ I Sbjct: 471 DIAPMFVLLALIIALGVAPELIFDMITDAVDPILN 505 >UniRef50_Q0H8X6 NADH-ubiquinone oxidoreductase chain 4 n=10 Tax=Dikarya RepID=NU4M_USTMA Length = 484 Score = 353 bits (908), Expect = 7e-96, Method: Composition-based stats. Identities = 150/500 (30%), Positives = 269/500 (53%), Gaps = 24/500 (4%) Query: 2 LLPWLILIPFIGGFLCWQT---ERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSA 58 +L L++IP +G + R + +AL T + LS+ LW + S ++ Sbjct: 1 MLTLLLIIPLVGALMLAPMQGNTRQSESQMKRLALGTSLINFVLSIVLWGEFDSSTSEYQ 60 Query: 59 GIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHL 118 ++ +H+ +DG+SL V+LT + + +L +W I++ +F + Sbjct: 61 FTQEFNQVNFC--------HLHIGVDGISLYFVLLTTFITPICILSNWDNIKEQLKYFLM 112 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 + + +I VF+ +D+ LF+ F+E +L+P++ ++ +WG TR+ AA F+YT Sbjct: 113 CFLVLETLLIAVFVVLDILLFYVFFESVLIPLFLIVGIWG----GSATRVRAAFLLFLYT 168 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 L ML+A L + + V + +++ + + ++ + LL L FI+ A+K P++ Sbjct: 169 LFGSLFMLLAFLVIYY------NVGSTDFQVVSLSEINLESQKLLWLAVFISMAIKTPLL 222 Query: 239 PLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 P H WLP AH++AP AGSV LAG++LK A YG +R + P+A++ F+P+ + VI + Sbjct: 223 PFHVWLPRAHAEAPLAGSVILAGLILKLATYGYMRILIQFLPDATSYFSPLVQTIAVITL 282 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFIL 358 Y + QTD K L+AY+S+ HM V++ +++ + GA++ IAHG+ + LFIL Sbjct: 283 IYASLATLRQTDFKALVAYSSIGHMAVVVLGLFSNTIQGIDGALLLSIAHGVVSPALFIL 342 Query: 359 C-GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV 417 G LY+R HTR +R G+ + M + F + +P + N+ GEF+ L G+FQ Sbjct: 343 VGGVLYDRYHTRTIRYYRGMTAYMPLFSIMFFVFTIFNAAVPLSANWAGEFLCLAGAFQR 402 Query: 418 VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVL 477 PV V+ + G+V ++ YS+ + +R FG + ++ RE ++L L+ + V+ Sbjct: 403 NPVFAVLGSTGIVLSAAYSIWLYNRIAFGAWSKYLNY--TTDLTRREFMLLLPLLFVAVV 460 Query: 478 LGFYPQPILDTSHSAIGNIQ 497 G +P ILD+ H++ + Sbjct: 461 FGIFPNIILDSIHASTSGLI 480 >UniRef50_UPI00003837CC COG1009: NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI00003837CC Length = 758 Score = 352 bits (904), Expect = 2e-95, Method: Composition-based stats. Identities = 111/497 (22%), Positives = 200/497 (40%), Gaps = 29/497 (5%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL ++PF+G L V +A + +L L L Q Sbjct: 6 LLAAAAILPFLGSVLAGALPSRARNVAAALAGLVTLTSLGCILALTPQL---------AG 56 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIE--KYQGFFHLN 119 + W+P G+ L +DGL+ L VL +G L VL + + Sbjct: 57 GSSVVHAIDWLPSLGVRFVLRLDGLAWLFSVLVLAIGALVVLYARYYMSPADPVPRLFAY 116 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 + +G ++G+ L+ ++ FWE+ + + LI W A+ + T Sbjct: 117 FLAFVGAMLGIILSGNLIQLVLFWELTSIVSFLLIGYWYDNAAARDGARMS----LTITA 172 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 A GL +L+ + + + + + T +S + ++ K P Sbjct: 173 AGGLCLLVGTILIGRIVGSYDLETVLASGD---TIRNSSLYLPALVLVLAGALTKSAQFP 229 Query: 240 LHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 H WLP A + APT S + ++K + ++R L + + I +G+ + Sbjct: 230 FHIWLPRAMA-APTPISAYLHSATMVKAGIFLMIRLWPVL--AGTDAWYWIVGTIGMATM 286 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFIL 358 G+W A Q D+K L+AY+++SH+G + + + S LA A+ + H A LF+ Sbjct: 287 LIGSWSAIFQHDLKGLLAYSTISHLGLITLLLGLDSPLAVVAAIFHTVNHATFKASLFMA 346 Query: 359 CGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ-- 416 G + TRDMR + GLW M + L++ A A G+P F+ + M L + Sbjct: 347 VGIIDHETGTRDMRRLSGLWRAMPYTATLAMVAAAAMAGVPLLNGFLSKEMFLSEAVDNM 406 Query: 417 ----VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLV 472 + + V++T F +YSL + + +FG+ + +E I +LV Sbjct: 407 GDHPIHLALPVLATLASAFTMLYSLRFIRQTFFGRPPHDL-PEEPHEPVRWMRIPIEMLV 465 Query: 473 VLLVLLGFYPQPILDTS 489 + + +G P + + Sbjct: 466 LTCIAIGLVPNLTIGPA 482 >UniRef50_D2L238 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L238_9DELT Length = 498 Score = 350 bits (900), Expect = 6e-95, Method: Composition-based stats. Identities = 189/504 (37%), Positives = 281/504 (55%), Gaps = 15/504 (2%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L +L+ P L R V R AL G+ L LS+ + L +AG P Sbjct: 7 LTFLVFWPLAAAMLMPLF-RGSVAACRRFALAAAGMELMLSVLVVLLF------AAGRPD 59 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMW 122 D WIP GI L DGLSL+ VVLT +G+ + S + + +H ++ Sbjct: 60 LPVVEDAAWIPELGIRYTLTCDGLSLVFVVLTACIGLCCMAASRHDDTRRPALYHALILC 119 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 L V GVFLA D+FLF FWE LVP++FLI ++GH R+ A KFF+++ G Sbjct: 120 SLATVQGVFLATDLFLFALFWEAQLVPVFFLIGVFGHG-----DRMRVAIKFFLFSAVGG 174 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 L+M +A++AL + TF +L P+ L F ++FA+K+P+VP+H Sbjct: 175 LLMFLAVIALGIYAADGPNGPTFALFDLTRLPLPVTTGRWLFAAFVLSFAIKIPLVPVHM 234 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGA 302 WLPDAH++APTAGS+ LAG+LLKT Y L+RF+LPLFP A+ FAP+ +LG+ G+FY + Sbjct: 235 WLPDAHTEAPTAGSLILAGLLLKTGGYALIRFALPLFPEAALAFAPLLTFLGLAGLFYAS 294 Query: 303 WMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQL 362 +A AQ D+KRL+AY+S+ HMG V++AI +GS+LA GAV+ M++H L++ GLF L G + Sbjct: 295 AVALAQEDVKRLVAYSSIGHMGLVVVAIVSGSRLALGGAVLLMVSHALTSGGLFALAGMI 354 Query: 363 YERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVIT 422 ER+ +R ++GGLW++ A L +A +PG FVGE MI+FG F+ Sbjct: 355 GERLGSRRFEVLGGLWNRAPAFGAAFLCCVLAAAALPGLSGFVGEAMIVFGLFKAHLAAG 414 Query: 423 VISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYP 482 + + G+ Y L + FG A+S P + RE +++ LV+ ++ LG +P Sbjct: 415 LFAVAGMAVTLAYLLRLARDVLFGPAQSSAL---FPDLDARETTLLVSLVLAMLWLGLFP 471 Query: 483 QPILDTSHSAIGNIQQWFVNSVTT 506 P+L + I +++ Sbjct: 472 GPVLSLVSGPLDLIAGHVWPALSG 495 >UniRef50_C0ZYI8 NADH-quinone oxidoreductase chain M n=22 Tax=Actinomycetales RepID=C0ZYI8_RHOE4 Length = 534 Score = 350 bits (898), Expect = 1e-94, Method: Composition-based stats. Identities = 168/511 (32%), Positives = 266/511 (52%), Gaps = 29/511 (5%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L L L+P IG + + + +AL L ++ L + Q Sbjct: 19 LTALWLLPLIGAGVVLALPARSYQFAKSLALAVSVAVLVIAGGLGVAFDRGG------GQ 72 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI-------EKYQGF 115 +Q WIP FG S L +DG++L++V+LT +L L ++ W ++ ++ Sbjct: 73 FQFVESHSWIPAFGTSYTLGLDGIALVLVLLTAVLVPLLLIAGWNDVPADPASPKRMPHT 132 Query: 116 FHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFF 175 + ++ + V+ F A+D+ LF+ F+E ML+PMYFLI +G G R AA KF Sbjct: 133 YFALILVVESMVMISFSALDILLFYIFFEAMLIPMYFLIGGFG-----GVGRSRAAVKFL 187 Query: 176 IYTQASGLVMLIAILALVFVHY---NATGVWTFNYEELLNTP------MSSGVEYLLMLG 226 +Y GLVML A++ L V + TF++ + + + GV L LG Sbjct: 188 LYNLLGGLVMLAAVIGLYVVTTRDESPFTSGTFDFRAIASAASSGELGVGPGVLNALFLG 247 Query: 227 FFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEF 286 F AFAVK P+ PLH WLPD+ ++ + +V + ++ K + ++R+ L LFP +S+ F Sbjct: 248 FMFAFAVKAPLWPLHSWLPDSAVESTPSTAVLMMAVVDKVGTFAMIRYCLQLFPESSSTF 307 Query: 287 APIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMI 346 AP + L VIGI YGA +A AQTD+ RLIAYTS+SH GF+++ I+ + + G+ + M+ Sbjct: 308 APWIITLAVIGIVYGAILAIAQTDVMRLIAYTSISHFGFIILGIFAMTSQSQAGSALYMV 367 Query: 347 AHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVG 406 HG+S A LF++ G L + TR + GG+ L L +ATL +PG FV Sbjct: 368 NHGISTAALFLIAGFLVSQRGTRSIAAYGGVQKVAPVLAGTFLVAGLATLSLPGLAPFVS 427 Query: 407 EFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELF 466 EF++L G++ V + +T LV +++Y L + R G K + ++ REL Sbjct: 428 EFLVLIGTYSRYHVAAIAATVALVLSAIYILWLYQRMMGGPVKEG--QGTIRDLARRELV 485 Query: 467 MILLLVVLLVLLGFYPQPILDTSHSAIGNIQ 497 ++ L+ LL+LLG YP+P LD A+ + Sbjct: 486 VVAPLIALLLLLGIYPKPALDVITPAVSHTV 516 >UniRef50_B7GME2 NADH dehydrogenase subunit M n=6 Tax=Bacillaceae RepID=B7GME2_ANOFW Length = 503 Score = 350 bits (898), Expect = 1e-94, Method: Composition-based stats. Identities = 162/508 (31%), Positives = 265/508 (52%), Gaps = 18/508 (3%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQG--GYSLTQSAGI 60 L LI P +G + + K +W+ ++ +L LSL + Q GY +++ + Sbjct: 6 LSLLIFSPLLGILVLSLFPKEQEKAIKWLGVLATLPSLCLSLFAFWQYRNGYDISKLSEK 65 Query: 61 PQWQSEFDMPWIPR--FGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHL 118 W D P++ F ++ L +DG +L+M+VLT +L LA + S ++++G + Sbjct: 66 RSWIQFGDFPFLKETDFTVAYELHVDGFALVMIVLTTILATLAAIASTSIQKEWKG-YFQ 124 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 + + G++GVF A ++ LFF F+E+ L+PM+FLI WG+ + AA + IY Sbjct: 125 LFLLLEIGMLGVFAASNLVLFFIFFELTLIPMFFLIGKWGYF-----EKEKAAYSYLIYN 179 Query: 179 QASGLVMLIAILALVFVHYNATGV----WTFNYEELLNTPMSSGVEYLLMLGFFIAFAVK 234 V+LI I L + N +P+S + Y L L +AF VK Sbjct: 180 GLGSAVLLIVIAVLFARTGTSNIAELRYILTNSSVQTISPISDDLRYGLFLALLVAFGVK 239 Query: 235 MPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLG 294 +P+VPLH W+ H QAP + + AG+LLK A+GL+R + LFP +F+ + LG Sbjct: 240 LPIVPLHRWMLRVHVQAPPSVVMLHAGVLLKIGAFGLVRLAFGLFPGQFQQFSTWLIVLG 299 Query: 295 VIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAG 354 ++ + YGA++A QTD K ++AY+SVSHMG +LI + + ++ QGA+ Q ++HG AA Sbjct: 300 IVNLLYGAFLALRQTDFKMVLAYSSVSHMGIILIGLGSLNEAGIQGAIFQAVSHGFIAAF 359 Query: 355 LFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGS 414 LF G +YER T + +GG+ M ++ L A+A+LG+PGT FV EFM G+ Sbjct: 360 LFFFVGVMYERTRTTTLARLGGMAKTMPYVSGFMLAGAMASLGLPGTSGFVSEFMAFVGA 419 Query: 415 FQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVL 474 FQ P + I T G++ +VY L + FG+ A + + E + L++L Sbjct: 420 FQAAPWLAAIGTLGIIMTAVYLLRAVLHMTFGQT----AVTNVRDLRGIEWVPAISLLLL 475 Query: 475 LVLLGFYPQPILDTSHSAIGNIQQWFVN 502 ++++G YP + + I + Sbjct: 476 IIIIGVYPSILAMPLQTTIETMMNGLGG 503 >UniRef50_Q37401 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Allomyces macrogynus RepID=Q37401_ALLMA Length = 482 Score = 348 bits (895), Expect = 2e-94, Method: Composition-based stats. Identities = 169/493 (34%), Positives = 269/493 (54%), Gaps = 17/493 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRW-IALITMGLTLALSLQLWLQGGYSLTQSAGI 60 +L LI++P +G + + E R IALI G+ +S+ LW+Q + Sbjct: 1 MLSTLIILPLVGALIIYLGESSFTNETRLRIALIIAGINFIISIGLWIQFDEN------T 54 Query: 61 PQWQSEFDMPWIPRFGI-SIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLN 119 Q+Q D + G+ + + +DG+SL V+LT L + +L + + + + Sbjct: 55 AQFQFVEDFGSLFGQGLCHLIIGVDGISLFFVILTSFLTIPIIL-TPPYNGESPTAYLIT 113 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 L+ + +I VF+ +D+ LF+ +E +L+PM+ +I +WG K +I AA FF+YT Sbjct: 114 LLILESMLIAVFVVLDLLLFYICFETVLIPMFLIIGIWGSKV----RKIMAAYHFFLYTL 169 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 L ML+ I+ + + T + + L S E LL L FF++FAVK+P+ P Sbjct: 170 LGSLFMLLGIIVIYYQTG--TTDYQYLLAVLGTAESSLTRENLLWLTFFLSFAVKVPMFP 227 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 ++GWLP AHS+APT GS+ LAGILLK + YG LR+S+PLFPNAS F P + L VIGI Sbjct: 228 VYGWLPLAHSEAPTGGSMILAGILLKLSGYGFLRYSIPLFPNASNYFTPFVLTLAVIGIL 287 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 Y + F QTD+K +IAY+S+SHM V+ AI++ + + +GA+ MI+HG+ ++ LF Sbjct: 288 YSIFACFRQTDLKSVIAYSSISHMNIVIAAIFSDNIIGIEGALFMMISHGIVSSALFFCV 347 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP 419 G LY+R TR + GL M + + +PG F+GEF+ G F+ P Sbjct: 348 GALYDRTGTRILAYYRGLTMVMPLFSLCFFILILNNMAVPGGIGFIGEFLCFLGIFKTNP 407 Query: 420 VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLG 479 +I ++++ +V + Y++ + +R FG S ++ RE ++L V L +LLG Sbjct: 408 IICLLASLSIVLGAAYNIFLTNRLLFGSLSKYFKSYN--DLTRREFMILLPFVFLSILLG 465 Query: 480 FYPQPILDTSHSA 492 P IL+ H + Sbjct: 466 LCPNIILNAIHQS 478 >UniRef50_C7PRG9 Proton-translocating NADH-quinone oxidoreductase, chain M n=4 Tax=Sphingobacteriales RepID=C7PRG9_CHIPD Length = 478 Score = 348 bits (893), Expect = 4e-94, Method: Composition-based stats. Identities = 149/500 (29%), Positives = 280/500 (56%), Gaps = 22/500 (4%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 ML LILIP + G + + + G K + L+ +LA+++ Q + Sbjct: 1 MLTVLLILIPLVAGLVTFGLKGSGPKA---LGLVASLASLAVTVAALFQFRTAPDA---- 53 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 + WIP+ G + +DG+ L++ +LT + +L ++ + + F+ + Sbjct: 54 ----LQLTANWIPQLGAQFSVGLDGMGLMLCLLTAISFLLILIVIYNREYERPNSFYGLM 109 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + G++GVF A D LF+ FWE+ L+P+YFL +LWG G+ RI KFF+YT A Sbjct: 110 LLSQAGLVGVFTAYDALLFYVFWELALIPVYFLCSLWG-----GEKRIPVTFKFFVYTFA 164 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 L+ML+ ++ + T +F+Y ++ ++ + L FF+AFA+KMP+ P Sbjct: 165 GSLLMLVGLIYIYL----QTPEHSFSYASFVSGAITPQDQSWLFWLFFVAFAIKMPIFPF 220 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H W PD + Q+PT ++ L+GI++K +G++R+ LP+ P + ++ +A+ L +IGI Y Sbjct: 221 HTWQPDTYEQSPTPVTMVLSGIMVKMGLFGVVRWLLPVLPKGAYMWSDVAIVLSIIGIIY 280 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 + +A Q+DIKRLIAY+S++H+G + AI+T ++ + QG ++QM HG++ GL+I+ Sbjct: 281 ASCIAIVQSDIKRLIAYSSIAHIGLMSAAIFTNNEQSLQGLMVQMFNHGINIIGLWIIVE 340 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 + R+ +++ MGG+ + + ++A + +P T F+GEF++L G FQ Sbjct: 341 IIQNRLKIKNLNEMGGIAQYAPGIAIFLVTISLANIALPLTNGFIGEFLMLSGLFQYNVW 400 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 ++ G++ +VY+L M+ + FG++ ++ + EL +++++V ++++LGF Sbjct: 401 FMAVAGLGIILGAVYTLNMVQKVIFGQSNQ--LTETTTDLKGNELLVLIIIVGIILVLGF 458 Query: 481 YPQPILDTSHSAIGNIQQWF 500 YP+P+L+ S + + + Sbjct: 459 YPKPMLELVSSTTELVNKVY 478 >UniRef50_C6D5D3 Proton-translocating NADH-quinone oxidoreductase, chain M n=3 Tax=Bacillales RepID=C6D5D3_PAESJ Length = 543 Score = 348 bits (893), Expect = 4e-94, Method: Composition-based stats. Identities = 160/536 (29%), Positives = 263/536 (49%), Gaps = 45/536 (8%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L +++ P IG + + + + A++ + L LSL L+ + Sbjct: 9 ILSIILVTPLIGLLVVLLLPKHRNRWLQVAAIVATLIPLLLSLWLYADYDKHQGGNTFEE 68 Query: 62 QWQSEF----------DMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEK 111 + + IDGLSL +V+LT L+ +A S ++K Sbjct: 69 TATWVEVPLNKETQASNGVTNYTLSFQYDVGIDGLSLPLVILTTLITAMAAFASV-HVKK 127 Query: 112 YQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAA 171 F+ + + GV+GVF+A D+FLFF F+E+ L+ MYFLI +WG+ R AA Sbjct: 128 RWKAFYAWFLLLETGVLGVFMARDLFLFFIFFEITLIAMYFLIGIWGYF-----NRERAA 182 Query: 172 TKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEE---------------------- 209 +F IY +MLIA + LV T ++ Sbjct: 183 NQFVIYNGLGSAIMLIAFILLVNTAGFHIDQDTSSFIYSGSYADILRNLSDPSAWVNLAP 242 Query: 210 -----LLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILL 264 L MS + ++ L +AF +K+P++P H W+ H++A A + +G+LL Sbjct: 243 DQTGGLNPFHMSETMHTVIFLLLVVAFGIKLPILPFHTWMLKVHNEAHPAIVMIHSGVLL 302 Query: 265 KTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMG 324 K AYGL+RF + LFP + ++A + LG+ + YGA +AF QTD+K ++AY+S+SHMG Sbjct: 303 KMGAYGLIRFGIVLFPEQAKDWAVVLASLGLANLLYGALIAFRQTDLKLVLAYSSISHMG 362 Query: 325 FVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWL 384 VL+ + + + QGAV Q+++HGL +A LF++ G LYER T + +GGL M ++ Sbjct: 363 IVLLGLAAFNGIGLQGAVFQLVSHGLISALLFLIVGSLYERTKTTTLSELGGLARSMPFI 422 Query: 385 PALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAY 444 + L +A+LG+PG FVGEF+ L G F P I S G++ +VY L + + Sbjct: 423 SGILLAAGLASLGLPGLSGFVGEFLSLLGLFDSQPWIAGFSVIGVILTAVYILRAVLKTT 482 Query: 445 FGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWF 500 FG + + + L E +++L+ ++LLG YP + DT ++ + + Sbjct: 483 FGPIEERYL--GVKDARLVEALPMIVLLAFILLLGCYPSVLTDTFQYSVEGLFKPL 536 >UniRef50_B8FRJ8 Proton-translocating NADH-quinone oxidoreductase, chain M n=13 Tax=Clostridia RepID=B8FRJ8_DESHD Length = 519 Score = 348 bits (893), Expect = 4e-94, Method: Composition-based stats. Identities = 159/498 (31%), Positives = 268/498 (53%), Gaps = 15/498 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +LP+ +L P + F+ + K + +A + +L LSL ++ SL Sbjct: 14 ILPFALLAPILAAFIIVFLPKEEGKTIKLVAALGTLTSLLLSLYVFFAYDRSL------A 67 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q +P IP G+++ +DG+S+ M++LT L+ AV SW IE F + L+ Sbjct: 68 GMQFNLTIPLIPDIGVNLAFGVDGISIPMLLLTNLIAFTAVYSSWN-IENRVKEFFVLLL 126 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 ++ GV+G F+A D+F+FF F+E++++P+Y ++ +WG K A K IY Sbjct: 127 ILIAGVMGTFIARDLFIFFLFYEIVVIPIYIMVIIWGSTKRVTKE--YAGMKLTIYLLLG 184 Query: 182 GLVMLIAILALVFVHYNATGVW----TFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPV 237 ++L+A+++L N TF ++EL + + + F + + Sbjct: 185 SALLLVAMVSLWVNATNQLAAMGQGPTFMFDELARLQYDETFQIICFGLLAVGFGSLISM 244 Query: 238 VPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 P H W PD ++ APTA S+ AG+L K YGL+R L +FP + +AP+ L V+ Sbjct: 245 FPFHSWSPDGYAGAPTAVSMIHAGVLKKIGGYGLIRLGLMVFPLGAKFWAPVIAVLAVVN 304 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 + Y A++A AQ D+K ++ Y+SVSHMG+VLIA+ + + GAV M AHG+ +A F Sbjct: 305 VLYAAFIALAQKDLKYVVGYSSVSHMGYVLIAVAALNITSINGAVAMMFAHGVMSALFFS 364 Query: 358 LCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV 417 + G +YE+ HTR++ +GGL +M L L +A LG+PGT NF+GEF I G+ +V Sbjct: 365 MIGFIYEKTHTRNIAELGGLAHQMPRLAVGFLLAGMAGLGLPGTVNFIGEFTIFIGTVKV 424 Query: 418 VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVL 477 +PV V+ G++F +VYSL ++ FG + + L + EL +++LV ++++ Sbjct: 425 LPVHAVVGIAGIIFTAVYSLRLIANVLFGPRRKEWD--HLKDLRGPELVPLVVLVFVIII 482 Query: 478 LGFYPQPILDTSHSAIGN 495 G +P +L + + + Sbjct: 483 TGVFPNTVLQLIDTGVQS 500 >UniRef50_Q1H3T5 NADH dehydrogenase (Quinone) n=12 Tax=Proteobacteria RepID=Q1H3T5_METFK Length = 966 Score = 347 bits (891), Expect = 6e-94, Method: Composition-based stats. Identities = 130/514 (25%), Positives = 222/514 (43%), Gaps = 30/514 (5%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 M L +L LIPFIG + R G W+A+++ L+L L L +Q T I Sbjct: 1 MGLAYLTLIPFIGAIFTKLSTRLGRYSSAWVAILSAMLSLFLLWPLAMQAWQGNTVIQRI 60 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQ--GFFHL 118 PW+P GIS+ +DGLSLL ++ L+G++ V+ + + G F+ Sbjct: 61 --------TPWMPELGISLAFRLDGLSLLFSLMILLVGLIVVIYARYYLSPRDSMGRFYS 112 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 L+ +G ++GV L+ ++ FWE+ + + LI+ W + + A Sbjct: 113 YLLLFMGSMLGVVLSENIIQLLMFWELTSLSSFLLISYWQQREEASRGARMA-------- 164 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPM-SSGVEYLLMLGFFIAFAVKMPV 237 +A+L + N G + + L + S L++L + K Sbjct: 165 LTITGGGGLAMLGGFLLLGNMAGSYDLSDILLAGDAIRSHEHYPLMLLLILLGVFTKSAQ 224 Query: 238 VPLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVI 296 P H WLP+A + APT S + ++K + L R L + + E+ I +G+ Sbjct: 225 FPFHFWLPNAMA-APTPVSAYLHSATMVKAGIFLLARLFPAL--SGTPEWTWIVSGVGIA 281 Query: 297 GIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLF 356 G+++A + D+K L+AY+++SH+G ++ G+ LA + +I H A LF Sbjct: 282 TFVTGSYIALFKHDMKALLAYSTISHLGLIVALFGIGTPLAVVAGIFHIINHATFKASLF 341 Query: 357 ILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMIL----- 411 +L G + TRD+R +GGL M + L + A A G+PG F+ + M L Sbjct: 342 MLAGIVDHETGTRDIRHLGGLRRYMPYSAVLMVIAAAAMAGIPGLNGFISKEMFLDQIVA 401 Query: 412 -FGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILL 470 +F ++ I T G VF++ YS+ + H +FG + + S + + Sbjct: 402 HGNTFPHQWLLPAIVTAGAVFSAAYSIRIAHSVFFGSEPDDL-PKAPHDPSSGMQIPVAI 460 Query: 471 LVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNSV 504 LV V +G P + Q + Sbjct: 461 LVAACVAVGVLPAIAEPLVTLVTASTLQTAPPAF 494 >UniRef50_A5UXL0 Proton-translocating NADH-quinone oxidoreductase, chain M n=6 Tax=Chloroflexi (class) RepID=A5UXL0_ROSS1 Length = 507 Score = 347 bits (890), Expect = 9e-94, Method: Composition-based stats. Identities = 150/503 (29%), Positives = 258/503 (51%), Gaps = 18/503 (3%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L + L + + + R + + ++LAL+L ++L Y Q Q Sbjct: 13 LSLIWLSLVAPTLIIALLKPEQKREIRIVGAVFSFISLALTLLVYLAYDYRSPQ-----Q 67 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMW 122 +Q ++PW+P GI+ L +DG+SL M++L GL+ L SW IE+ + L+ Sbjct: 68 FQFLEEVPWLPELGINYILGVDGVSLPMLLLNGLVIFTGALISWN-IEERTREYWALLLL 126 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 + GV GVF+++D+FL F F+E+ ++PMY LI +WG + A K +Y Sbjct: 127 LAAGVYGVFVSLDLFLLFIFYELAVLPMYLLIGIWGST-----RKEYGAMKLTLYLMGGS 181 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPM-SSGVEYLLMLGFFIAFAVKMPVVPLH 241 +++ ++A+ + TF+ L + + S V+ + + F+ FAV + P H Sbjct: 182 AFIILGMVAVYYSGTLR----TFDMRLLAQSALFSRDVQIVFFVPLFLGFAVLAGMFPFH 237 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 W P H APTA S+ AG+L+K AYG LR ++ +FP ++ + +I YG Sbjct: 238 TWSPTGHVAAPTAVSMLHAGVLMKLGAYGCLRVAMWIFPEGASYWLLPIAIATLINAVYG 297 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG- 360 A +A Q D K +I Y+SVSHMG L+ + + + GAV+QM AHG+ A F + G Sbjct: 298 ASIAMTQRDFKFMIGYSSVSHMGLTLMGLAAANTIGITGAVLQMFAHGVMTALFFAVVGR 357 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 +Y+R HTR +GGL++ M + + + ++++GMPG F EF I G +Q P+ Sbjct: 358 MVYDRTHTRQFPELGGLFNVMPFAAIVFIIAGLSSMGMPGLAGFWAEFNIFMGMWQRFPL 417 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 I V++ + + Y L ++R +FG+ K+ + LPG++ E +L +L++ G Sbjct: 418 IAVLAGISIPITAGYILLAVYRVFFGELKNP-EFRRLPGLTTPEYVAGAILAAVLIVSGI 476 Query: 481 YPQPILDTSHSAIGNIQQWFVNS 503 YP + + +++ I + + Sbjct: 477 YPAYLTEPIEASVRPIAEALARA 499 >UniRef50_Q3JBP3 Proton-translocating NADH-quinone oxidoreductase, chain M n=4 Tax=Proteobacteria RepID=Q3JBP3_NITOC Length = 485 Score = 345 bits (886), Expect = 2e-93, Method: Composition-based stats. Identities = 161/499 (32%), Positives = 261/499 (52%), Gaps = 17/499 (3%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L +++ P IG + + R + L L LS L L A P+ Sbjct: 4 LSLILITPVIGALIIAFMPPHKSLLIRRTTVGVSALVLILSFSLLLVFD------ASSPE 57 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMW 122 +Q PW P G LA+DGL+L MV+L LL +A+L S+ + +++ ++ Sbjct: 58 FQLVELKPWNPELGSHYALAMDGLALPMVLLATLLSFIAILASYN-MTDRPKGYNIAMLV 116 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 + GV+GVF+A D LF+ FWE+ L+PM+FLI WG GK R A+ F +YT Sbjct: 117 LECGVLGVFMAEDWALFYVFWELTLIPMFFLIDQWG-----GKRRQMASLNFVLYTMGGS 171 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 + ML+++L + ++ T + M + L+ LG I F VK+P+ PLHG Sbjct: 172 VFMLVSLLIIY--TSSSEHSTTIAAMTQAASQMPLDKQILVFLGLLIGFGVKVPIFPLHG 229 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGA 302 WLP AH +AP+ S+ L+GILLK AYGL+R ++ + P+A+ P+ L + I YG Sbjct: 230 WLPLAHVEAPSPVSILLSGILLKMGAYGLIR-AIGMLPDAALALQPLLAGLALFSIVYGG 288 Query: 303 WMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQL 362 +A+ Q+D+K +IAY+S+SHMG V++ I ++ + GA +QMIAHGL A LF+L G L Sbjct: 289 LLAWRQSDLKAMIAYSSISHMGIVILGISALNEAGFLGATMQMIAHGLVAGSLFLLIGLL 348 Query: 363 YERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVIT 422 Y+R H+R++ L M + +A++G+PG F E L GSF+ Sbjct: 349 YDRTHSREVADYSSLVQVMPKFALFTTLALLASIGLPGLVGFPAELHALIGSFERWGWWV 408 Query: 423 VISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYP 482 ++ + G+V ++ Y++ + R + G + ++ + L + EL +L ++ LG P Sbjct: 409 LLVSLGVVISAAYAMRTIVRLFTGPVRPEM--RALKDLHGTELASAGVLAFGIIALGLMP 466 Query: 483 QPILDTSHSAIGNIQQWFV 501 L+ + + ++ F Sbjct: 467 ASALELFGAYVISLSAGFP 485 >UniRef50_A4FPS9 NADH dehydrogenase I chain M n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FPS9_SACEN Length = 525 Score = 345 bits (886), Expect = 3e-93, Method: Composition-based stats. Identities = 170/513 (33%), Positives = 267/513 (52%), Gaps = 36/513 (7%) Query: 12 IGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPW 71 G + R +V +W AL + + L+ WL+ + + Q +PW Sbjct: 13 FGSVVVGLL-RGNEQVAKWTALAFSLVEVVLAAVAWLEYDPAG------ARMQLTSSVPW 65 Query: 72 IPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI---EKYQGFFHLNLMWILGGVI 128 IP F I++ +DG++L+MV + LL L + SW E + G F L+ + Sbjct: 66 IPAFDINLSFGVDGIALVMVAVIALLLPLVLGYSWGEKLPAGRTHGGFFSLLLLEQALTV 125 Query: 129 GVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIA 188 GVF A D+FLF+ +E+ML+PMYFLI +G G+ R AA KFF+Y+ GL+ML + Sbjct: 126 GVFAATDVFLFYVLFEIMLIPMYFLIGGYG-----GEQRTYAAVKFFLYSFLGGLIMLAS 180 Query: 189 ILALVFVHYNATGVWTFNYEELLN--TPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPD 246 + G TF++ +L+ + V+ + LGFF AFA+K P+VP H WLPD Sbjct: 181 AIGAYVYSAQVLGQGTFDWAKLVPVLADAPTDVQVWIFLGFFTAFAIKAPLVPFHTWLPD 240 Query: 247 AHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAF 306 A +QAP +V + G+L K +G LR+SLPL P AS P+ + L V+G+ YG+ AF Sbjct: 241 AAAQAPIGVAVIVVGVLDKVGTFGFLRYSLPLTPEASKLLTPLVLVLAVLGVLYGSLQAF 300 Query: 307 AQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERI 366 Q D+KR IAY S++H GF+ + I+ + + GAV MI H ++ L + G + R Sbjct: 301 GQDDLKRFIAYVSIAHFGFIALGIFAFTSQSQVGAVSYMINHSIATGMLILAIGMVISRG 360 Query: 367 HTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVIST 426 + + GG+ L + L ++TL +PGT +F+ EF++L G+F PV TV++T Sbjct: 361 GSTRIADYGGMARLTPLLAGVLLVAGLSTLSLPGTNSFISEFLVLIGAFPTQPVYTVLAT 420 Query: 427 FGLVFASVYSLAMLHRAYFGKAK-------------------SQIASQELPGMSLRELFM 467 G+V A+VY L + + G + + + + + LRE + Sbjct: 421 VGMVLAAVYVLRIYQQVMQGPVRGDALLASAAGPGAVGDPELPEKHRRGITDLDLREKAV 480 Query: 468 ILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWF 500 + L+VL++ LGFYP+P+LD ++G Sbjct: 481 LAPLIVLVLALGFYPKPVLDVIGPSVGATMSEV 513 >UniRef50_B5IL09 NAD(P)H dehydrogenase I, subunit D-2 n=3 Tax=Cyanobacteria RepID=B5IL09_9CHRO Length = 537 Score = 343 bits (882), Expect = 8e-93, Method: Composition-based stats. Identities = 180/509 (35%), Positives = 263/509 (51%), Gaps = 26/509 (5%) Query: 3 LPWLILIPFIGGFLCWQTERFG--VKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 L ++L+P L G + PR +AL T+ + L L L + Q G Sbjct: 33 LSLIVLLPAAMALLMPLLPGDGSDPRWPRTLALGTLLVDLGLMLVCFSQ-----RFDGGS 87 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 Q + W+P G+ L DGLS +VVL+GL+ +L+V SW I + + + Sbjct: 88 SGLQLVERVSWVPALGLEWSLGADGLSAPLVVLSGLVTLLSVAASWN-INRKTRLYFALM 146 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + VFL+ D LFF WE+ LVP+Y LIA+WG G+ R AATKF +YT Sbjct: 147 LVQASAQGLVFLSQDFLLFFLAWELELVPVYLLIAIWG-----GQQRQYAATKFILYTAT 201 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 + L++L++ LAL F + ++FN +L L GF I F VK+P+ PL Sbjct: 202 ASLLILVSGLALAF----SGDSFSFNLSDLAARSPGGVFGLLCYAGFLIGFGVKLPMFPL 257 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H WLPDAH +A S+ LAG+LLK Y L+RF++ + P A AP + LG++ I Y Sbjct: 258 HTWLPDAHGEANAPVSMLLAGVLLKMGGYALMRFNVQMLPEAHLTLAPALIVLGIVNIVY 317 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 GA AFAQ ++KR IA +SVSHMGFVL+ I L GA++QMI+HGL AA +F + G Sbjct: 318 GALNAFAQDNVKRRIACSSVSHMGFVLLGIGAIDALGMSGAMLQMISHGLIAAAMFFVTG 377 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ---- 416 YER T + MGGL + A L ++A+L +PG FV E + G Sbjct: 378 VFYERTKTLSIPNMGGLAKALPITFAFFLASSLASLALPGMSGFVSEITVFLGITANDGF 437 Query: 417 ---VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVV 473 + V++ GLV VY L++ R +FG +A + M REL + L L+V Sbjct: 438 TTGFRVITIVLAAIGLVLTPVYLLSLCRRVFFGPRIPALAV--VGDMKPRELLIGLTLLV 495 Query: 474 LLVLLGFYPQPILDTSHSAIGNIQQWFVN 502 +++GF+P+ +D ++ + + Sbjct: 496 PTLVIGFWPRVAIDFYEASTNALASQLAS 524 >UniRef50_D2SDG3 Proton-translocating NADH-quinone oxidoreductase, chain M n=8 Tax=Actinomycetales RepID=D2SDG3_9ACTO Length = 544 Score = 343 bits (880), Expect = 1e-92, Method: Composition-based stats. Identities = 155/462 (33%), Positives = 229/462 (49%), Gaps = 23/462 (4%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 M L +IL+P L R + I + + LAL +W + S + Sbjct: 1 MFLTVVILLPLAVAGLLLVLPRLSGRAVSGIWMAAASVDLALIGWMWWRYEPGEGASGVV 60 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 E D+ WIP H+ +DGLSL ++ LTG+L + + S +E E F Sbjct: 61 DGIAYEVDVRWIPTVDAGYHVGVDGLSLPLLALTGVLFLACAVWSPRE-EDRPRSFAALF 119 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 +++ +G F A+D+ LFF F+++ +V MYF+IA WGH +A KFF+YT Sbjct: 120 LFLQTACLGTFAALDLILFFVFFDLTIVGMYFIIAGWGHG-----NARRSALKFFLYTFV 174 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPM---SSGVEYLLMLGFFIAFAVKMPV 237 L +L+ + L TF+ L P S L++L + AVK P+ Sbjct: 175 GSLALLVGFIGLFLGGEER----TFDMVALAQDPPLADSPVAGGLVLLAIGLGLAVKTPL 230 Query: 238 VPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 P H WLPDAH+ AP GS LAG+LLK YG +R ++P+ P A +A + + LGV+ Sbjct: 231 FPFHTWLPDAHTDAPAPGSAILAGVLLKLGTYGFVRIAMPILPEAWQRWAMVIVVLGVVS 290 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGS----------QLAYQGAVIQMIA 347 + +GA++A AQTD+KR+IAYTSV+HMG+VL+ + +A GAV QM++ Sbjct: 291 VLWGAFVALAQTDVKRMIAYTSVNHMGYVLLGLGAAGLVASADQGARTVATVGAVYQMVS 350 Query: 348 HGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGE 407 HGL LF+L G L+ R T D GL A A +LG+PG F+ E Sbjct: 351 HGLLTGALFLLSGVLWSRGRTYDSGRWSGLARPAPVFAASLAVAAFGSLGLPGLSGFIAE 410 Query: 408 FMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAK 449 F + G+ PV TV++ G++ + L L R G + Sbjct: 411 FQVFAGALPAAPVATVLAVVGILVTAGLFLVALQRLLTGPLR 452 >UniRef50_Q466B7 F420H2 dehydrogenase subunit M n=3 Tax=Methanosarcina RepID=Q466B7_METBF Length = 495 Score = 342 bits (878), Expect = 2e-92, Method: Composition-based stats. Identities = 164/500 (32%), Positives = 263/500 (52%), Gaps = 22/500 (4%) Query: 4 PWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQW 63 LIL+P I + + T+ +A + TL L+L +L + Sbjct: 6 SLLILVPLIFAAVTFFTKTKEQAAG--LAFLGSLATLGLTLYAYLNFD------SSTAAM 57 Query: 64 QSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWI 123 Q + WIP G+ + IDG+S+ +++L ++ +L SWKE + F+ ++ + Sbjct: 58 QFFESIDWIPLLGVKYSVGIDGISMPLILLNAIVIPFLILYSWKEEREDSNRFYGLILTM 117 Query: 124 LGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGL 183 VIGVF+A+D +F+ FWE+ L+P++F++ +WG G+ R A+ KFFIYT + L Sbjct: 118 QAAVIGVFVALDFVVFYIFWELTLIPLFFMVNIWG-----GEKRAHASYKFFIYTHVASL 172 Query: 184 VMLIAILALVFVHYNATGVWTFNYEELLNTPM---SSGVEYLLMLGFFIAFAVKMPVVPL 240 VML+ I L + + TGV TF+ EL+ S + + L F K+P P Sbjct: 173 VMLLGIFGLFYASWQQTGVPTFDIRELVGQFQFLGSGLLRNAIFLSIIFGFLAKLPTFPF 232 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNA--SAEFAPIAMWLGVIGI 298 H WLPDA+++APTAGSV ILLK YGL R SLP+ PN I LG I Sbjct: 233 HSWLPDAYTEAPTAGSVLF--ILLKIGGYGLFRISLPMLPNTGNPELMITILGLLGAFSI 290 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFIL 358 YGA +A Q D+KR+IAY+S+SHMG+VL+ L+ GA+ Q +HGL + +F+ Sbjct: 291 LYGALLALRQKDLKRMIAYSSLSHMGYVLLGSAGFVALSVSGAMFQQFSHGLIMSIMFMS 350 Query: 359 CGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVV 418 G + TR + +GGL KM L L + +A+LG+PG F+ EF++L S+ + Sbjct: 351 AGAIQTSTGTRIINNLGGLAKKMPTLAVLMMLGFMASLGLPGLTGFIAEFLVLAFSYVNL 410 Query: 419 PVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLL 478 P +++ +V + Y L + RA FG ++ ++ ++ ++F + ++ +L+V Sbjct: 411 PGFVLLALLAIVITAGYHLWAMQRAMFGVYNEKLG--DVRDINSLQVFSMAVIALLVVYF 468 Query: 479 GFYPQPILDTSHSAIGNIQQ 498 G+ P P+L+ + I Sbjct: 469 GWNPNPVLNMMITNSEAIVS 488 >UniRef50_D1BBE0 NADH dehydrogenase subunit M n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BBE0_SANKS Length = 567 Score = 342 bits (878), Expect = 2e-92, Method: Composition-based stats. Identities = 178/554 (32%), Positives = 266/554 (48%), Gaps = 61/554 (11%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L L ++P +G + W ++ R +AL L + L + S + Sbjct: 10 LTLLAVVPLVGAAVVWALPHGSRRLARPVALGFSLLEVVLVVLAVAAFDTSAASTH---- 65 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI------------- 109 Q WIP+ G S L +DG+ LL+V L+ L L + +W+E Sbjct: 66 -QLVETHAWIPQIGASYALGVDGVGLLLVALSVGLVPLVIGAAWREQGVEDAVSTVSTVS 124 Query: 110 -------------------------------EKYQGFFHLNLMWILGGVIGVFLAIDMFL 138 E + ++ + ++ VF A D+FL Sbjct: 125 TEGAAGAAGAAAPARGAGTAKSPAGADDRPGEGRLRHYLALVLVLQTFMVLVFSARDVFL 184 Query: 139 FFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYN 198 F+ +E MLVP+YF+I +G +G R AA KF I++ A GLVML A++ L Sbjct: 185 FYVVFEAMLVPVYFMIGGFG----EGARRRYAAIKFLIFSLAGGLVMLAAVIVLYVQ--G 238 Query: 199 ATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVD 258 G F E L + E LL LGFF+AFA+K P+ P+H WLPDA AP SV Sbjct: 239 PGGEQGFLTENLTGLGLDQTTERLLFLGFFLAFAIKAPMFPVHSWLPDAAEHAPAGTSVL 298 Query: 259 LAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYT 318 L G+L K +G+L LPLFP+AS AP+ + L V+ I YGA +A Q D+ RL+AYT Sbjct: 299 LVGVLDKVGTFGMLTLCLPLFPDASRWAAPVVIVLAVVSIIYGALLALGQDDLMRLVAYT 358 Query: 319 SVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERI---HTRDMRMMG 375 SVSH G +++ I+ +QL+ GA M+ HG+S LF++ G + R +R + +G Sbjct: 359 SVSHFGVIVLGIFAFTQLSVSGASFYMVNHGISTGLLFLVGGFVVRRTVSGRSRRISELG 418 Query: 376 GLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVY 435 GL L + L ++ L +PG FV E M+ G+F PV ++S +V A++Y Sbjct: 419 GLAKVTPVLAGVFLLAGLSALSLPGLSTFVSEIMVFIGAFGRYPVAAIVSAVVVVLAALY 478 Query: 436 SLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTS-HSAIG 494 L R + G + ++A E+ +S RE +++ LVV L++LGF P P LD A Sbjct: 479 VLLTYQRIFTGPVRPELA--EVRDLSARERWVVAPLVVALLVLGFVPGPALDLVGDPAAV 536 Query: 495 NIQQWFVNSVTTTR 508 ++Q V V Sbjct: 537 TLEQVGVTDVVPQP 550 >UniRef50_A0AL63 Complete genome n=20 Tax=Bacillales RepID=A0AL63_LISW6 Length = 802 Score = 341 bits (876), Expect = 4e-92, Method: Composition-based stats. Identities = 118/532 (22%), Positives = 215/532 (40%), Gaps = 48/532 (9%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L IL+PFI L R+ +V + + Y LT Sbjct: 4 LHLAILLPFIVALLIPLFYRWTKQVHTGW---------LVLPIPVILFIYFLTFIPKTMH 54 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI---EKYQGFFHLN 119 + MPWIPR GI+ + +DGLSLL +L +G L S + ++ F+ Sbjct: 55 EATIVSMPWIPRLGINFTVVVDGLSLLFALLITGIGSLVTFYSIYYLGKKKERLSNFYTF 114 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 L + ++GV L+ ++ + + FWE+ + + LI W H + A K + T Sbjct: 115 LFMFMTAMLGVVLSDNLIVLYLFWELTSISSFLLIGYWYH----RERSRYGARKSMMITV 170 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 GL+ML + L + + + ++++ + + M+ + K VP Sbjct: 171 FGGLMMLGGFILLHIMSDSFSIRAIIQNADIISH---NSLFIPAMILVLLGAFTKSAQVP 227 Query: 240 LHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 H WLPDA +APT S + ++K Y + RF+ +S + +G+ + Sbjct: 228 FHIWLPDAM-EAPTPVSAYLHSATMVKAGIYIVARFTPLF--ASSGVWFWTVSLVGITTL 284 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQ-------------LAYQGAVIQM 345 F+G+ A + D+K ++AY+++S +G ++ + G+ +A AV + Sbjct: 285 FWGSLNATKKNDLKAILAYSTISQLGMIMALLGVGAASLHFDTLSDDIYVMAIVAAVFHL 344 Query: 346 IAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFV 405 H LF++ G + TRD+R +GGL M ++ A G+P F+ Sbjct: 345 FNHATFKGSLFMMVGIVDHETGTRDIRRLGGLMRIMPITATIAFIGTFAMAGIPPFNGFL 404 Query: 406 GEFMILFGSFQ-----------VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIAS 454 + M ++ V++ VF VYS+ + + + GK K + Sbjct: 405 SKEMFFESMINITHLQLFDASTWGILLPVVAWVASVFTFVYSMIIFFKTFTGKVKPFLLP 464 Query: 455 QELPGMSLRELFMILLLVVLLVLLGFYPQPILDTS-HSAIGNIQQWFVNSVT 505 ++ L ++L + +VL+G +P I A+ I + Sbjct: 465 KKPHEAPFGLLLPPIILSIFVVLIGLFPNLIAKPILEPAVRAIVPGLATDFS 516 >UniRef50_C0VVK4 NADH dehydrogenase subunit M n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VVK4_9CORY Length = 521 Score = 340 bits (874), Expect = 5e-92, Method: Composition-based stats. Identities = 157/506 (31%), Positives = 259/506 (51%), Gaps = 25/506 (4%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL ++P + R +A + + LAL++ + Sbjct: 3 LLTTAAMVPLVAALFMTFLR---SGAARVVAFVASLVPLALAIVMVAGFDPG-------A 52 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKY----QGFFH 117 Q ++PWIP G L +DG++L MV+LT +L + +L S E + + F Sbjct: 53 GMQYTVEIPWIPALGAYYALGVDGIALAMVLLTAILTPIVILYSGTEHYRADQMGEHAFL 112 Query: 118 LNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIY 177 ++ I G I VF + D+ LF+ F+E L+PM+FLI +G G+ R AA KF +Y Sbjct: 113 GFVLAIEGLSIFVFSSTDVLLFYLFFEATLIPMFFLIGGFG-----GENRRYAAIKFLLY 167 Query: 178 TQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPV 237 + SGL+ML AI+ + V G TF +L + + V L +GF IAF VK P+ Sbjct: 168 SLGSGLLMLAAIIGVYIV-----GDGTFLLSDLQDADLGGTVGMWLFVGFMIAFIVKAPM 222 Query: 238 VPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 VP H WLPDA G+V + I+ K +G++RF++ LFP A+ F + +WL VI Sbjct: 223 VPFHTWLPDAAENTTPGGAVMMVAIMDKIGTFGMIRFAMCLFPEATEYFRNVMIWLAVIS 282 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 + +GA A AQT++ R +AYTSVSH GF+++ ++ ++ A A + M HGLS A LF+ Sbjct: 283 VIWGALAALAQTNLMRFVAYTSVSHFGFIVLGMFAVNETAVSAASLYMFNHGLSTAMLFL 342 Query: 358 LCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV 417 + G + +R T D+ GG+ L L ++ + +PG FV EF ++ G+F Sbjct: 343 VVGYMIKRRSTADIHAFGGVQKVAPLLGGYLLIALLSAVALPGLAPFVSEFGVIAGTFNG 402 Query: 418 VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVL 477 P I+ +V A+ Y + + G+ ++ + +P ++ E +++ L+VLL++ Sbjct: 403 APWAAGIAAIAMVLAACYIMRVYKTTMTGEPGDEVI-RTMPDLTHPERWVLAPLIVLLIV 461 Query: 478 LGFYPQPILDTSHSAIGNIQQWFVNS 503 G YP+P+ + + A N ++ + Sbjct: 462 FGVYPEPLTNLVNPASVNTVEYLNSK 487 >UniRef50_Q0BU96 NADH-quinone oxidoreductase chain M n=12 Tax=Acetobacteraceae RepID=Q0BU96_GRABC Length = 510 Score = 340 bits (873), Expect = 7e-92, Method: Composition-based stats. Identities = 175/497 (35%), Positives = 285/497 (57%), Gaps = 22/497 (4%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVK---VPRWIALITMGLTLALSLQLWLQGGYSLTQSA 58 +L L+ +P G FL G+ R IAL +T LSL LW++ S+T Sbjct: 9 ILSILMGLPIFGSFLLLFLRGTGISQAATARGIALGVSLITFLLSLVLWIEFDPSMT--- 65 Query: 59 GIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHL 118 Q E W+P FG+S HL +DG SLL+++LT LL +++L +W+ I + + L Sbjct: 66 ---GLQFEERANWMPGFGVSYHLGVDGFSLLLLLLTTLLTPISILAAWRVIHERVSHYML 122 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 ++ + +IGVF+A D +F+ +E LVP LI LWG G R AA KFF+ T Sbjct: 123 AVLMLQAAMIGVFVAQDFVVFYISYEATLVPGSLLIGLWG-----GPRRAFAAMKFFLLT 177 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 S L+ML+ +L +V + + + LL+T + L+ L F +AF K+P+ Sbjct: 178 FGSSLLMLLVLLYAWYV------TGSTDMDVLLHTRFPMTAQSLIFLAFVLAFGTKLPIW 231 Query: 239 PLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 PLH WLPDA+ +AP + L+G++ K AYGLLRF++ + P+A+ +AP+ M LGV+G+ Sbjct: 232 PLHSWLPDAYGEAPAPATALLSGVMAKAGAYGLLRFAIGMAPDAARHYAPVMMILGVVGV 291 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFIL 358 Y A +A AQTD+K+++AY+S SHMG V++ +++ + GA+ QM++HG+ AGLF Sbjct: 292 IYAAIIACAQTDMKKMVAYSSFSHMGLVVVGLFSLTTEGIDGALFQMVSHGIIIAGLFFC 351 Query: 359 CGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVV 418 + R +RD + G+ + L AL++ F++A++G+PGTG FVGE +++FG+ V Sbjct: 352 VSMVSFRAGSRDFAKVTGVVNYAPRLAALAMAFSMASIGLPGTGGFVGEVLVIFGALHVN 411 Query: 419 PVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLL 478 + +++ +V ++Y L+ R FGK ++ L M+ E+ +++ LVVL + + Sbjct: 412 VWLALLAGTSMVLGAIYMLSFYWRVMFGKLSGAVSV--LHDMTRLEMAVLVPLVVLTLWM 469 Query: 479 GFYPQPILDTSHSAIGN 495 GFYP +++ Sbjct: 470 GFYPTSFTRVFNASAHA 486 >UniRef50_Q46LV6 Proton-translocating NADH-quinone oxidoreductase, chain M n=22 Tax=cellular organisms RepID=Q46LV6_PROMT Length = 524 Score = 340 bits (873), Expect = 9e-92, Method: Composition-based stats. Identities = 170/510 (33%), Positives = 262/510 (51%), Gaps = 27/510 (5%) Query: 3 LPWLILIPFIGGFLCWQTE---RFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAG 59 L ++L+P +G + +PR IAL+ + + + Sbjct: 25 LSLIVLLPIVGALIMPFLPTQESKNSNLPRNIALVILLADFLIVVLALANL-----FDPN 79 Query: 60 IPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLN 119 Q + W+P G+ L +DG+S +VVL+GL+ L+ SWK +++ + Sbjct: 80 SESLQLVERLQWLPSIGLEWSLGVDGISAPLVVLSGLITFLSAAASWK-VKQKTRLYFAL 138 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 L+ VFL+ D LFF WE+ LVP+Y LIA+WG GK ++ AATKF +YT Sbjct: 139 LLIQASAQALVFLSQDFLLFFLAWELELVPVYLLIAIWG-----GKRKLYAATKFILYTA 193 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 + L++LI+ LAL +TFN E+ + LGF I F VK+P+ P Sbjct: 194 LASLLILISGLALALSGDQ----FTFNLSEIAAKSFTGNFGIFCYLGFLIGFGVKLPIFP 249 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 LH WLPDAH +A S+ LAG+LLK Y L+RF++ + P+ AP + +G++ I Sbjct: 250 LHTWLPDAHGEANAPVSMLLAGVLLKMGGYALIRFNVQILPDTHLILAPALIIIGIVNII 309 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 YGA AFAQ ++KR IA +SVSHMGFVL+ I + L GA++QMI+HGL AA +F + Sbjct: 310 YGALNAFAQDNVKRRIACSSVSHMGFVLVGIGAINALGISGAMLQMISHGLIAAAMFFVT 369 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ--- 416 G YER +T + MGGL + A L ++A+L +PG F+ E + G Sbjct: 370 GSFYERTNTLSIPNMGGLAKALPITFAFFLASSLASLALPGMSGFISEITVFLGITSQEG 429 Query: 417 ----VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLV 472 + +++ GLV +Y L+M R +FG ++ + M REL + L L+ Sbjct: 430 FTSLFRAITILLAAIGLVLTPIYLLSMCRRVFFGPRIPALSI--VKEMDARELSIGLSLL 487 Query: 473 VLLVLLGFYPQPILDTSHSAIGNIQQWFVN 502 V +++GF+P+ +D + + Q + Sbjct: 488 VPTLVIGFWPRIAIDLYEVSTNALAQSLIT 517 >UniRef50_B0CBT4 Proton-translocating NAD(P)H-quinone oxidoreductase, chain M n=66 Tax=cellular organisms RepID=B0CBT4_ACAM1 Length = 529 Score = 340 bits (872), Expect = 9e-92, Method: Composition-based stats. Identities = 162/514 (31%), Positives = 271/514 (52%), Gaps = 24/514 (4%) Query: 2 LLPWLILIPFIGGFLCWQTERF--GVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAG 59 +L L+ P G L + K R +AL+ GL ++ + + Sbjct: 1 MLSVLVWFPLFGVLLLALLPKSIDANKYARSVALVVAGLVFVWTVYIAILFNPKQVT--- 57 Query: 60 IPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLN 119 Q +PWI G++ HLA+DGLSL ++ L LL +A+ + E+E F++ Sbjct: 58 ---MQFGEFIPWIKAIGLNYHLAVDGLSLPLLGLNSLLTFIAIWSTDPEVE-RPRFYYAL 113 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 ++ + V G FLA D+ LFF F+E+ ++P+YFLIA+WG G R AATKF +YT Sbjct: 114 MLLLNSSVAGAFLAQDVLLFFLFYELEIIPLYFLIAIWG-----GARRSYAATKFLLYTA 168 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTP-----MSSGVEYLLMLGFFIAFAVK 234 SG+V+L L +V++ ++ + ++ ++ ++ +LM+G + F +K Sbjct: 169 FSGIVLLATFLGIVWLSGASSFAYEPLRAIIVGASDTPSGLTLKLQLILMVGILLGFGIK 228 Query: 235 MPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLG 294 +P PLH WLPDAH +A T SV LAG+LLK YGLLR+ + L P+A P Sbjct: 229 IPFFPLHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRYGVGLLPDAWVYLGPWLAIWA 288 Query: 295 VIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAG 354 + YG A +Q D+K+++AY S++HM F+L+A ++L+ AV QM++HGL +A Sbjct: 289 AVSALYGTSCAISQQDMKKVVAYASIAHMAFILLAAAASTELSMIAAVCQMVSHGLISAL 348 Query: 355 LFILCGQLYERIHTRDMRMMGGLW---SKMKWLPALSLFFAVATLGMPGTGNFVGEFMIL 411 LF+L G +Y++ +RDM + GL + + ++ + +A+ G+PG F+ EF+ Sbjct: 349 LFLLVGVVYKKTGSRDMFFLRGLLNPERGLPLIGSMMILGVMASAGIPGMVGFISEFLTF 408 Query: 412 FGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLL 471 GS+ + PV T++ +VY L M++R +FG+ ++ +P ++ + +L Sbjct: 409 RGSYPIFPVQTLVCMIATGLTAVYFLLMINRVFFGRLPDELD--RIPTVTWSDRLPAAIL 466 Query: 472 VVLLVLLGFYPQPILDTSHSAIGNIQQWFVNSVT 505 V L+ LLG P I+ S + I + + Sbjct: 467 VALIFLLGIQPNFIVRWSETQIAALIPYNPRPPQ 500 >UniRef50_Q9G8V8 NADH-ubiquinone oxidoreductase chain 4 n=8 Tax=Eukaryota RepID=Q9G8V8_RHDSA Length = 483 Score = 340 bits (872), Expect = 1e-91, Method: Composition-based stats. Identities = 167/495 (33%), Positives = 274/495 (55%), Gaps = 17/495 (3%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L +IL +G FL + + A + T +SL L L + Sbjct: 6 LSLMILFSLVGVFLVIIIPDKNKVLIKKSAFVCSVFTFVISLLLLLFFDS------SSCK 59 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMW 122 +Q + + F ++ + +DG+S+ ++LT L + +L W +K +++ + Sbjct: 60 FQFVEWLELLIFFNFNLFIGVDGISIFFILLTTFLIPICLLVEWFSKKKNIKEYYVCFLL 119 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 I +I VF +D+ +F+ F+E +L+PM+ +I ++G K +I AA +FF+YT Sbjct: 120 INIFLIVVFSVLDILIFYIFFESILIPMFLVIGIFGSKT----RKIKAAYQFFLYTLLGS 175 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 ++ML++I + F + +++ LL+ S + LL L FFI+FA+K+P+ PLH Sbjct: 176 VLMLLSIFLIFFE------AGSTDFQILLSVKFSEKKQLLLWLAFFISFAIKIPMFPLHI 229 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGA 302 WLP+AH +APTAGSV LAG+LLK AYG +RFSL FP AS F P+ L ++ + Y + Sbjct: 230 WLPEAHVEAPTAGSVILAGVLLKMGAYGFVRFSLTFFPIASVFFCPLIFVLSLLAVLYTS 289 Query: 303 WMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQL 362 Q D+K++IAY+SV+HMG V I I++ + +G+ + MI+HG ++ LF+L G L Sbjct: 290 LTTLRQVDLKKIIAYSSVAHMGLVTIGIFSFNLYGLEGSFLMMISHGFVSSALFLLVGML 349 Query: 363 YERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVIT 422 YE+ H+R ++ GG+ M LFF+VA LG PGT +F EF+IL G+FQV + Sbjct: 350 YEKHHSRLIKYYGGIAQIMPLYTFFFLFFSVANLGFPGTSSFCAEFLILLGAFQVNTFVA 409 Query: 423 VISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYP 482 S+ G+VF++ Y L + +R FG+ + S + ++ ++ L + LG YP Sbjct: 410 TFSSLGMVFSAAYCLWLSNRLLFGQLRVYYVSSYC-DLQKKDFAILFPLSFFTLFLGVYP 468 Query: 483 QPILDTSHSAIGNIQ 497 + LD H++I N+ Sbjct: 469 EIFLDYIHASISNLI 483 >UniRef50_Q89AT5 NADH-quinone oxidoreductase subunit M n=2 Tax=cellular organisms RepID=NUOM_BUCBP Length = 508 Score = 339 bits (871), Expect = 1e-91, Method: Composition-based stats. Identities = 234/506 (46%), Positives = 348/506 (68%), Gaps = 4/506 (0%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 MLLP L+ IPF GGFLC + K+ ++AL +M L LSL L + S Sbjct: 1 MLLPMLVSIPFFGGFLCLLFNQKNAKISYYLALTSMALVFILSLILLFNTINVIVSSISN 60 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 W E+ +PWI +FGIS HLA+D LS+LM+ LT +LG+++V CSWK+++K G F+ L Sbjct: 61 SSWSFEYIVPWIEKFGISFHLAVDRLSILMLNLTSILGLVSVFCSWKKVQKNIGLFYFGL 120 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGK---TRITAATKFFIY 177 +W LG +IG+F+++D+FLFF FWE+ ++P YFL+ +WG+K +D K I +A KFFIY Sbjct: 121 LWTLGSIIGIFISVDLFLFFCFWELSVLPTYFLMIMWGYKDNDRKFYYNNIFSANKFFIY 180 Query: 178 TQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPV 237 +Q SGLV+L++ L LV+ HY + TF+Y+ L +T M+ +E +MLGFF+AFA+K+P+ Sbjct: 181 SQISGLVLLLSTLVLVYTHYIYDHILTFDYDVLKHTSMNIVLESCIMLGFFLAFAIKIPI 240 Query: 238 VPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 VP H WLPD H +P G VD++GILLKT+ Y L+RF++PLFP+++ F+ I M+ G+I Sbjct: 241 VPFHSWLPDFHCYSPVIGVVDISGILLKTSIYALMRFNIPLFPHSTEIFSSIIMFFGIIT 300 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 IFYGA ++ Q +IKR IAY S+SHMGF+LIAIY+ +Q+AYQGA+IQ+I++ LS A LF+ Sbjct: 301 IFYGAIVSLFQNNIKRFIAYVSISHMGFILIAIYSINQVAYQGAIIQLISYSLSTAALFL 360 Query: 358 LCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV 417 L G +++ I T D+ MGGLWSK++W+P L F++ LG+PGTGNFVGEFMI G F Sbjct: 361 LSGHVFKSISTFDIDKMGGLWSKLRWIPGFLLIFSIINLGVPGTGNFVGEFMIFMGCFNS 420 Query: 418 VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQ-ELPGMSLRELFMILLLVVLLV 476 +I ++S F L+ ++ SL + + FG ++ +L M++ + + + L+VL++ Sbjct: 421 HLMIVILSIFSLILLALCSLMFVQKICFGPINNRYDFLCDLNVMTICDFLIFVFLLVLIL 480 Query: 477 LLGFYPQPILDTSHSAIGNIQQWFVN 502 ++G YP I+D S+S + +I+ F N Sbjct: 481 IIGLYPNIIIDVSYSPLCSIRNIFSN 506 >UniRef50_B9XHI7 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=bacterium Ellin514 RepID=B9XHI7_9BACT Length = 514 Score = 339 bits (870), Expect = 1e-91, Method: Composition-based stats. Identities = 144/496 (29%), Positives = 249/496 (50%), Gaps = 9/496 (1%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L +IL P I + R V R +A++ +T+ L+++++ Q ++ Sbjct: 4 LTSIILCPLIAALVLCFVPRNYRFVMRIVAMVATFVTMILAIKMFWQYDNAVI--GESGT 61 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMW 122 ++ E +PW+ G++ H+ +DG+++ ++++ ++ A SW +I F++ L+ Sbjct: 62 YKFEQLIPWVKSLGLNYHVGVDGINVGLILMGAIVAFAAACVSW-DINSRDKEFYILLLV 120 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 + GG++G F ++D+F+F+FF E+ LVP + +I +WG G+ + A + +Y Sbjct: 121 MTGGILGAFASLDIFMFYFFHELALVPTFIMIGVWG----RGENKNYATFQITLYLSIGA 176 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 L+ L+ ++AL T + + P+S + + F + + + P H Sbjct: 177 LISLVGLIALYVKSGANTFDIVALTTYVKDHPISLHDQNFIFPLLLFGFGILISLWPFHT 236 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGA 302 W P + APTA ++ AG+L K YGL+R +LPL P A+ + + WL + IFY Sbjct: 237 WAPLGYGSAPTATAMLHAGVLKKFGLYGLIRIALPLLPQATHSWINVIAWLCLGNIFYCG 296 Query: 303 WMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQL 362 +A Q + LI Y+SV+HMGFV + I + + + GAV+ MIAHG AA F L G L Sbjct: 297 LVAMRQKNFNWLIGYSSVAHMGFVFLGIASLNLIGITGAVLVMIAHGFLAALSFGLSGYL 356 Query: 363 YERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVIT 422 Y T +M MGGL K+ +L + A G+PG NF GE I FG+++ P+IT Sbjct: 357 YHITGTLEMDKMGGLLRKLPFLGTALMMALFAGCGLPGFANFAGEVTIFFGAYKTYPLIT 416 Query: 423 VISTFG-LVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 I+ +G V +VY L + G + R L+L+V L++ GF+ Sbjct: 417 GIAVWGASVIGAVYMLRAIRNMLHGVVPEKFMGVAESAFPHR-KVPYLILLVSLLVFGFF 475 Query: 482 PQPILDTSHSAIGNIQ 497 P+ + + + I Sbjct: 476 PRLLTEKIEPSAKRIV 491 >UniRef50_A8LTG8 NADH dehydrogenase (Quinone) n=58 Tax=Proteobacteria RepID=A8LTG8_DINSH Length = 969 Score = 338 bits (869), Expect = 2e-91, Method: Composition-based stats. Identities = 114/513 (22%), Positives = 211/513 (41%), Gaps = 28/513 (5%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L + L+PF+G + R G + L + L L +A Sbjct: 8 LFIIALLPFLGALVPGLMIRAGRTACASFTAVPTALAFIMLLILSPAVLRGEVITAE--- 64 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI--EKYQGFFHLNL 120 + W+P+ G+S +DGL LL ++ +G+L +L + + + G F+ L Sbjct: 65 ------IGWLPQLGLSASFFLDGLGLLFALMITGVGLLIILYARFYLSGDDPMGQFYTYL 118 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + G ++G+ L+ ++ L FWE+ + + LI W H + A T A Sbjct: 119 LLFQGAMLGIVLSDNILLLLIFWELTSLSSFLLIGYWKHLPEGRQGARMA----LAVTGA 174 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 GL M+ +L L + + + + +S ++ + K P Sbjct: 175 GGLAMIGGMLILGNIVGSYNLT---DILQAGEQIRASEWYLPALILILLGAFTKSAQFPF 231 Query: 241 HGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 H WLP A + APT S + ++K + + R L + + I G++ + Sbjct: 232 HFWLPHAMA-APTPVSAYLHSATMVKAGVFLMARMWPVL--AGTDAWFYIVATTGLVTMV 288 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 GA +A + D+K L+A+++VSH+G + + + G+Q A AV +I H A LF+ Sbjct: 289 MGAGIALFKDDLKALLAFSTVSHLGLLTMLLGFGTQAAAVAAVFHIINHLTFKAALFMTA 348 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP 419 G + HTRD++ +GGL M A+ A++ G+P F+ + M+L + Sbjct: 349 GIVDHETHTRDIKRLGGLRHLMPITFAIGTVAALSMAGIPLFNGFLSKEMMLEEASHTGW 408 Query: 420 V-----ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVL 474 + + V++TFG + + YS + + G + + LLVVL Sbjct: 409 LGNPWVVPVVATFGALLSVAYSFRFIGHVFLGPVRDDY-PAKPHDPPFGMWASPALLVVL 467 Query: 475 LVLLGFYPQPILDTSHSAIGNIQQWFVNSVTTT 507 ++++G P +A + ++ Sbjct: 468 VLVIGMAPFVAEGIVTAASSAVTGADLHPHLKI 500 >UniRef50_A0LEQ7 Proton-translocating NADH-quinone oxidoreductase, chain M n=2 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LEQ7_SYNFM Length = 506 Score = 338 bits (869), Expect = 2e-91, Method: Composition-based stats. Identities = 152/499 (30%), Positives = 248/499 (49%), Gaps = 18/499 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L ++L +G + K+ + ++L GL L L L L+ Sbjct: 26 ILSTILLSTVLGLLVILFIPADRPKLIKQVSLGFAGLGLVLCLWLYQAYDLQ------KG 79 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q W+ GI A+DG++L M++LT ++ V W ++E F + Sbjct: 80 GLQFVERFLWVESLGIYYFNAVDGINLPMLLLTAVVLFTGVWTMW-DLELRVKEFFALVF 138 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 ++ GV GVF+++D+F F ++++ L PMY LIA+WG + A K +Y A Sbjct: 139 LLVAGVYGVFMSMDLFWIFVWYDVSLFPMYPLIAIWGST-----RKEYGAMKLTLYLLAG 193 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 ++L IL L TF+ EL S + L + F+I F + V PLH Sbjct: 194 SALILPGILYLWAQAGGV----TFDLFELQKIGFSPFAQKLAFIFFYIGFGILAAVWPLH 249 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 W P H APTA S+ AG+L+K AYG+LR + L P A +A + LG +GI YG Sbjct: 250 TWSPVGHVAAPTAVSMIHAGVLMKLGAYGILRLGMTLCPEGLAYWADLMALLGTVGIVYG 309 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 A++ AQTD+K +I Y+SVSHMG V + + T + GAV QM AHG+ A F G Sbjct: 310 AFVGLAQTDLKYVIGYSSVSHMGMVGLGLSTMTVNGINGAVFQMFAHGVMTALFFSAVGY 369 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 +Y+R HT+ + +GGL M A + A + +G+P +F E ++ + + PV Sbjct: 370 IYDRTHTKMIPDLGGLSRTMPVASAFFIVAAFSGIGVPCMASFWAELLVFLSAVKTYPVR 429 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 +++ FGLV ++++ L ++ R ++G+ + A +P + L ++LV +++ G + Sbjct: 430 GILAVFGLVVSALFMLRVVQRTFYGERNERWA--HIPDVPLFLATPRIILVSIIIFFGIF 487 Query: 482 PQPILDTSHSAIGNIQQWF 500 P+ +LD SA+ Sbjct: 488 PKLMLDVIQSAVIPFVGSL 506 >UniRef50_A1SE39 Proton-translocating NADH-quinone oxidoreductase, chain M n=3 Tax=Propionibacterineae RepID=A1SE39_NOCSJ Length = 509 Score = 338 bits (869), Expect = 2e-91, Method: Composition-based stats. Identities = 166/503 (33%), Positives = 259/503 (51%), Gaps = 17/503 (3%) Query: 3 LPWLILIPFIGGFLCWQTERF-GVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 L L ++P +G + R G +P+ + L+ LTLA+ + + +Q Sbjct: 7 LTALWVLPLVGALVTAFVPRATGSALPKQVGLLFALLTLAVGIAIAVQYDTG-------D 59 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF-FHLNL 120 Q WI FG++ L +DGL LL++++T L L ++ +W + + F Sbjct: 60 GMQLTETHTWIEAFGVNYALGVDGLGLLLILMTVALVPLVLVATWNDADDRSSAAFVAWA 119 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + + + VF A D+FLF+ +E L+P YFLI +G R AA KF +Y Sbjct: 120 LALESFSLAVFAATDVFLFYMVFEATLIPAYFLIGRFGQ-----AGRGRAALKFLMYQLG 174 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 GLV+L +++ L V +A G ++ +L +S+ E L +GF IAFAVK P+ PL Sbjct: 175 GGLVLLASVIGLYVVSADA-GNPSYLLSDLQQLDLSTNTERWLFVGFMIAFAVKAPLFPL 233 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H WL D +A SV L IL K +G+LRF L LFP AS P+ + L ++ I Y Sbjct: 234 HTWLADTTEKATPGTSVLLVCILDKIGTFGMLRFGLGLFPEASQWATPVVVALALVSIVY 293 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 GA +A Q DI RLI TS+SH GF+ + I+ S GA++ M+ HG+ A LF++ G Sbjct: 294 GALVAIGQDDILRLIGLTSLSHFGFITLGIFAFSSQGGSGAILYMVNHGVGTAALFLIAG 353 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 L R T+ + + G+ +K L L L ++TLG+PG FV E ++L +F Sbjct: 354 YLIRRKGTQLISQIAGVETKAPLLAGLFLVAGLSTLGLPGLSQFVSEILVLISAFDYHWW 413 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 + I+ G+V A++Y L + R G A + + ++ REL ++ L+ LV GF Sbjct: 414 VGAIAVTGIVLAAIYVLWLYQRTMTGPATPG--DEAMTDLNRRELVAVVPLIAALVFFGF 471 Query: 481 YPQPILDTSHSAIGNIQQWFVNS 503 +P P+LD S+ + ++ Q S Sbjct: 472 FPMPLLDVSNPTVDSLLQHVGVS 494 >UniRef50_Q52978 Probable K(+)/H(+) antiporter subunit A/B n=110 Tax=Bacteria RepID=PHAAB_RHIME Length = 999 Score = 338 bits (868), Expect = 3e-91, Method: Composition-based stats. Identities = 117/514 (22%), Positives = 210/514 (40%), Gaps = 30/514 (5%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL IL+PF G + W A + ++ L+ Sbjct: 31 LLSVFILVPFAGSLIAIFFPSDQRGAISWFAGAIALVCFLVTAGLYPYVASGGV------ 84 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI--EKYQGFFHLN 119 + + W+P G++ L +DG + L L +GVL L + + E F Sbjct: 85 ---LHYRIDWVPELGLNFTLRMDGFAWLFSALITAIGVLVALYARYYMAEEDPVPRFFAL 141 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 + +G ++GV L+ ++ L FWE+ + + LI W H A A T Sbjct: 142 FLAFMGSMLGVVLSGNLILLAVFWELTSIVSFLLIGYWHHNAHARDGARMA----LTITG 197 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 GL M + ++ + + + + + G +L+L K P Sbjct: 198 TGGLAMFVGLIIIGKIVGSYELDAVLASGDAIRNHPLYGTVLVLVLL---GALTKSAQFP 254 Query: 240 LHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 H WLP A + APT S + ++K + L+RF + + + I G+ + Sbjct: 255 FHFWLPHAMA-APTPVSAYLHSATMVKAGVFLLVRFWPVM--AGTEAWFWIVGLAGLTTL 311 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFIL 358 GA+ A Q D+K L+AY+++SH+G + + + GS LA AV ++ H A LF+ Sbjct: 312 LLGAYFAIFQQDLKGLLAYSTISHLGLITVLLSLGSPLAAVAAVFHIVNHATFKASLFMA 371 Query: 359 CGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVV 418 G + TRD+R +GGL+ M L++ + A G+P F+ + M + + Sbjct: 372 AGIIDHESGTRDIRRLGGLFHFMPITATLAMVASAAMAGVPLLNGFLSKEMFFAEAIETH 431 Query: 419 ------PVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLV 472 V ++T +FA YSL +H +FG+ + + ++ + LV Sbjct: 432 LVNPLDTVTPYVATIAGMFAVTYSLRFIHGVFFGRPPADL-PRKPHEPPRWMRAPLDFLV 490 Query: 473 VLLVLLGFYP-QPILDTSHSAIGNIQQWFVNSVT 505 + +++G P Q I H+A+ ++ + + Sbjct: 491 LACLVVGIIPAQTIGPFLHTAVLSVLREGTPDYS 524 >UniRef50_C6X103 NADH-ubiquinone oxidoreductase chain M n=2 Tax=Flavobacteriaceae RepID=C6X103_FLAB3 Length = 497 Score = 338 bits (868), Expect = 3e-91, Method: Composition-based stats. Identities = 151/486 (31%), Positives = 261/486 (53%), Gaps = 24/486 (4%) Query: 27 VPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGL 86 +++AL + L+L + + T Q E + PW ++H IDG+ Sbjct: 26 ASKFLALGFAFAQMFLTLYMLAGLDFKPTVD---GVLQYEINYPWSQFIRSNLHFGIDGM 82 Query: 87 SLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMM 146 S+LM++LT +L L +L S+ E Y+ F+ ++ + G+IG+F A+D LF+ FWE+ Sbjct: 83 SMLMLLLTNILTPLIILSSFNEKPGYRNTFYGLILLMQFGLIGIFTALDGLLFYIFWEVT 142 Query: 147 LVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFN 206 L+P++ + +WG + +I T+FF+YT L ML+ ++ + T +F Sbjct: 143 LIPIWLIAGIWGQEN----KKIEFTTRFFVYTFVGSLFMLLGLIFVY------TNSASFA 192 Query: 207 YEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKT 266 +L N +++ + ++ F AFAVK+PV P H W D ++ +PT G++ L+GI+LK Sbjct: 193 LTDLYNAQLNTTEQTVVFWFIFFAFAVKLPVFPFHSWQADTYTYSPTQGTMLLSGIMLKM 252 Query: 267 AAYGLLRFSLPLFPNASAEF-APIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGF 325 A YGLLR+ LP+ P+ I + L ++GI +GA +A A D KR++AY+S+SH+G Sbjct: 253 AVYGLLRYLLPITPDPVLGISGQIVLVLAIVGIVHGALIAIAHNDTKRILAYSSLSHVGL 312 Query: 326 VLIAI---------YTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGG 376 ++ I + S +GA++Q AHG++ GLF LY+R TRD+R MGG Sbjct: 313 MVAGIMASAIVTMKGSLSTQGGEGAMVQAFAHGINIVGLFYCADILYKRFKTRDIRQMGG 372 Query: 377 LWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYS 436 L L + + ++G+P T F+GEF+++ F + V++ ++F++VY Sbjct: 373 LAKVAPKFAVLFMIILLGSIGLPLTNGFIGEFILIKSIFDYNKLAAVVAGLTMIFSAVYL 432 Query: 437 LAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNI 496 M +A FG+ ++ S +S E ++ L ++L G +PQP++D S++ I Sbjct: 433 FRMYGKAMFGEGDERVLS-SAEDLSGIEFSVLATLAGFVILFGVFPQPLIDMVSSSLKFI 491 Query: 497 QQWFVN 502 +N Sbjct: 492 YASMLN 497 >UniRef50_Q6UVR8 NADH-ubiquinone oxidoreductase chain 4 n=5 Tax=Viridiplantae RepID=Q6UVR8_PSEAK Length = 548 Score = 335 bits (861), Expect = 2e-90, Method: Composition-based stats. Identities = 169/516 (32%), Positives = 254/516 (49%), Gaps = 47/516 (9%) Query: 18 WQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFD--------- 68 + + V R IAL +T LSL LW+ + + Sbjct: 40 FMVPAWQVGFIRLIALNVSLITFLLSLALWVLFDPLTADFQFRSLINFQQEKLDTATTLH 99 Query: 69 ----------MPWIPR---------FGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI 109 + W F S IDG+SL +V+LT L + +L W Sbjct: 100 SLQGLLDNKALDWNNASIFETVGNLFNFSFSFGIDGISLWLVLLTTFLTPICILVGWALP 159 Query: 110 E-------KYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKAS 162 Y + + + I ++ VF D+ +F+ F+E +L+PM+ LI L+G + Sbjct: 160 ASLQIKGPHYLKIYCIIFLIIESLLLVVFCVRDLLVFYIFFEAVLIPMFLLIGLFGSQP- 218 Query: 163 DGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYL 222 I AA K F+YT A L ML+ IL + F + ++ L + S + + Sbjct: 219 ---RNIRAAYKMFLYTLAGSLPMLVGILLIYFQCG------STDWSILSTSYFSPTRQLI 269 Query: 223 LMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNA 282 L FF +FAVK P+VP HGWLP+ HS APTAGS+ LAGILLK YG LR+S+ LFP A Sbjct: 270 LWALFFFSFAVKAPLVPFHGWLPETHSNAPTAGSIVLAGILLKLGTYGFLRWSVTLFPLA 329 Query: 283 SAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAV 342 S FAPI + ++G+ Y + + Q D+K+LIAY+SVSHM L+ ++ + +G++ Sbjct: 330 SVYFAPIVYIICLVGVVYVSLITLRQIDVKKLIAYSSVSHMALCLLGMFAFNVQGLEGSL 389 Query: 343 IQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTG 402 + M+AHG+ + GLF+ G LY+R TR ++ GGL M L L + L +P Sbjct: 390 LMMVAHGIVSPGLFLCIGILYDRYKTRVIQYYGGLAMTMPILATSMLILIMGNLSLPILS 449 Query: 403 -NFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMS 461 +F E +I G F V ++ +I+ +V + YSL + R +FG K+ SQ +S Sbjct: 450 PSFGAELLIFTGVFLVNRLVAIIAISTMVLTAAYSLFLFSRVFFGNLKTVYISQ-FSDVS 508 Query: 462 LRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQ 497 RE F + + L +LLG +P +LDT H +I I Sbjct: 509 RREFFCLFPFLALSLLLGIFPALVLDTCHVSIAYIL 544 >UniRef50_Q2GKR0 NADH dehydrogenase I, M subunit n=5 Tax=Anaplasma RepID=Q2GKR0_ANAPZ Length = 491 Score = 335 bits (860), Expect = 2e-90, Method: Composition-based stats. Identities = 159/504 (31%), Positives = 255/504 (50%), Gaps = 26/504 (5%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 ++P++ILIP +GG L K+ + + T S+ + L + Sbjct: 1 MIPFMILIPVLGGCLIAFLRDSSSKLRGGLFISITFATFIASIAVLLSFYGNGLPVLRDY 60 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLC-----SWKEIEKYQGFF 116 W I A+D LSLLMV+L+ L L LC + ++ + F Sbjct: 61 TW-------------IGEVFAVDRLSLLMVILSTFLFFLCALCGVFSRACGVDKESESSF 107 Query: 117 HLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFI 176 L+ + V+GVF +F+ F+E L+PM+F+I WGH RI+AA +F I Sbjct: 108 FALLLLLEATVLGVFSVHTSLMFYVFFEASLIPMFFIIGKWGHG-----DRISAAFRFLI 162 Query: 177 YTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMP 236 YT A+ L+ LI ++ ++ +F + + + G+ L + F AFAVK+P Sbjct: 163 YTGAASLLFLIGLV--YSRVFSLGMFESFYADVSVALALPIGIRIALWIACFFAFAVKLP 220 Query: 237 VVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVI 296 +VP H WLP AH QAPT GSV LAG+L+K YG +RF L P S + + ++L I Sbjct: 221 MVPCHTWLPKAHVQAPTLGSVLLAGLLIKMGGYGFIRFCLSALPEISWKLSEFVVYLSAI 280 Query: 297 GIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLF 356 + Y + +AFAQ ++K L+AY+SV+HM FV I++ ++ GA+ QM++HGL +A LF Sbjct: 281 SLVYSSLVAFAQKNMKTLVAYSSVAHMSFVAAGIFSLNESGIVGAIFQMLSHGLISAALF 340 Query: 357 ILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ 416 + G +Y R T DM GG+ + M L + +FF++A+ G+PGT F+GEF+ + G FQ Sbjct: 341 LCVGMIYSRTGTMDMSKCGGIAASMPKLSFMMIFFSMASAGLPGTSGFIGEFLSILGIFQ 400 Query: 417 VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLV 476 V G+V ++ Y+L + +G + + ++ E ++ +L L++ Sbjct: 401 AFRFTAVCFAVGVVLSAAYTLRLCREVIWGSSPEGAKVID-SDINAVEFVILGILAALVL 459 Query: 477 LLGFYPQPILDTSHSAIGNIQQWF 500 G YP ++ I I Sbjct: 460 FFGIYPASVITFLKPWISAILPEL 483 >UniRef50_Q3JBP7 Proton-translocating NADH-quinone oxidoreductase, chain M n=3 Tax=Gammaproteobacteria RepID=Q3JBP7_NITOC Length = 512 Score = 335 bits (860), Expect = 2e-90, Method: Composition-based stats. Identities = 155/497 (31%), Positives = 252/497 (50%), Gaps = 18/497 (3%) Query: 17 CWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFG 76 +AL L LSL L + Q WIP Sbjct: 4 ISLLRIRNKHRILSVALGVAVAELLLSLILLGLFDPN------QDGMQFVEQHSWIPTLN 57 Query: 77 ISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDM 136 I L +DGLS+L V LT L+ V +L S + I+ + L+++ G IGV+ +D+ Sbjct: 58 IDYLLGVDGLSVLFVPLTALITVAVILASRRSIKTLSSLYFALLLFLEGITIGVYCTLDL 117 Query: 137 FLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVH 196 LFF FWE+ L P++FLI+LWG G R AA K+ ++ G+++L + L H Sbjct: 118 ALFFLFWELTLPPLFFLISLWG----IGVHRRYAALKYVLFMLTGGILLLFGFILLGLNH 173 Query: 197 YNATGV-----WTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQA 251 N TG+ +FNY ELL TP+ + ++ L F FA+K P+ P H WLP + Sbjct: 174 ANETGIAAPAGLSFNYMELLQTPIPLATQSIVFLLLFFGFAIKAPLFPFHVWLPTMAMEG 233 Query: 252 PTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDI 311 P + + + G LK +G++RF++PL P A++++ + M LG IG YGA +A QT++ Sbjct: 234 PASITAIIVG--LKLGLFGIIRFAIPLAPQAASQYFVLMMLLGAIGAIYGALIALKQTNL 291 Query: 312 KRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDM 371 +R++AY+S+SH GFVLI + QGAV Q+ G+ A+G+F++ G L R+ + ++ Sbjct: 292 RRMLAYSSISHAGFVLIGAAAFNIQGIQGAVFQLFNFGIVASGIFLIAGFLQYRLGSTEL 351 Query: 372 RMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVF 431 +GG M L +L +A++G+PGT F E +I+ G+F+ + + G++ Sbjct: 352 TALGGAARPMPILASLFFILGLASIGVPGTNGFAAEHLIVIGAFKAHIGMGLAVLLGIIL 411 Query: 432 ASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHS 491 ++ Y L +A+ G ++ +E + RE ++ +V L +LLG +PQ IL T+ Sbjct: 412 SAAYYLVFYQKAFLGPV-TRATVKETVDLRSREYWIAGTMVSLALLLGLFPQQILTTTDK 470 Query: 492 AIGNIQQWFVNSVTTTR 508 + + Sbjct: 471 TLQAWVARVETAPVAEN 487 >UniRef50_A6L163 NADH dehydrogenase I chain M n=18 Tax=Bacteroidetes RepID=A6L163_BACV8 Length = 493 Score = 335 bits (859), Expect = 3e-90, Method: Composition-based stats. Identities = 149/505 (29%), Positives = 246/505 (48%), Gaps = 18/505 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L + I++P + L V R + ++ + LALS+ L + L Q+ Sbjct: 3 ILSFFIIVPLL--MLASLWASRSVNQVRGVMVVGSSILLALSVYLTIDYI-ELRQAGATG 59 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 + W I + +DG+S+ M++L+ ++ SWK ++ + + Sbjct: 60 EMLFTASTVWYAPLHICYSVGVDGISVAMLLLSSIIVFTGTFASWK-LQPLTKEYFMWFT 118 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + GV G F++ D+F F F+E+ L+PMY LI +WG + AA K + Sbjct: 119 LLSVGVFGFFVSTDLFTMFMFYEVALIPMYLLIGVWGSG-----RKEYAAMKLTLMLMGG 173 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 +LI IL + + T N E+ + ++ + F+ F V + P H Sbjct: 174 SAFLLIGILGIFYGAGGE----TMNLLEIAKLHIPHEMQRIFFPLIFLGFGVLGALFPFH 229 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 W PD H+ APTA S+ AG+L+K YG R ++ L P +A + + + L I + YG Sbjct: 230 TWSPDGHASAPTAVSMLHAGVLMKLGGYGCFRVAMYLMPEGAAMWGDVFLILTTISVVYG 289 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 A+ A QTD+K + AY+SVSH G VL A+ ++ + GA++QM++HGL A F L G Sbjct: 290 AFSAVVQTDLKYINAYSSVSHCGLVLFALLMMTRTSCTGAILQMLSHGLMTALFFALIGM 349 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ----V 417 +Y R HTRD+R+MGGL M +L + +A LG+PG FV E + GSFQ Sbjct: 350 IYGRTHTRDVRLMGGLMKIMPFLAVGYVIAGLANLGLPGLSGFVAEMTVFVGSFQNDDTF 409 Query: 418 VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVL 477 V T+++T +V +VY L ++ + +GK + +L + E ++ L+ + Sbjct: 410 HRVCTLVATTSIVITAVYILRVVGKILYGKVLNP-EHLKLTDATWDERVAVICLIACVAG 468 Query: 478 LGFYPQPILDTSHSAIGNIQQWFVN 502 LG P I D +++ I +N Sbjct: 469 LGMAPFWISDLISNSVEPIISQLLN 493 >UniRef50_B9XFX2 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=bacterium Ellin514 RepID=B9XFX2_9BACT Length = 518 Score = 334 bits (858), Expect = 4e-90, Method: Composition-based stats. Identities = 157/525 (29%), Positives = 260/525 (49%), Gaps = 40/525 (7%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 L+ + IP IG + + ++ R + L +L L +W+ S Sbjct: 6 LISTITFIPLIGAIMLVGLDAERKRLARCLGLGFSLASLVLVAVMWIHFDSSAI------ 59 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q PWIP F + +DGL LLMV+LT L+ +A+L SW+ I + + ++ Sbjct: 60 DLQFVERHPWIPSFSAEYFVGVDGLGLLMVLLTALVTPMAMLSSWR-ISEKVPIYFAMML 118 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 ++ G++G F A++ F +F FWE+ LVP +FLI LWG G R AAT+FF+YT Sbjct: 119 FLEAGLLGTFTALNCFHWFLFWELSLVPAFFLIKLWG-----GPNRSAAATQFFVYTMVG 173 Query: 182 GLVMLIAILALVFVHYNATG------------VWTFNYEELLNTPMSSGVEYLLMLGFFI 229 + ML++ LA+ + N + S + G F+ Sbjct: 174 SVAMLLSFLAIYLAAHTFDFVQLAEKGHTGELASMLNLNLGVYGLNSRQFPLFIFAGIFL 233 Query: 230 AFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPI 289 FAVK+P++P H WLP +++APT ++ L G + K YG +R +P FP Sbjct: 234 GFAVKVPLIPFHTWLPTTYAEAPTGTTMLLTGAMSKMGVYGFIRILMPFFPEQMRIIMTP 293 Query: 290 AMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQL------------- 336 +WL VI I + A+ AF Q D+K++ AY+S++H+G+ L+ ++ ++ Sbjct: 294 LLWLAVITIVFSAYSAFVQKDLKKVFAYSSINHLGYCLLGVFAFAKFTGSDAHWNLEKAA 353 Query: 337 AYQGAVIQMIAHGLSAAGLFILCGQLYERI-HTRDMRMMGGLWSKMKWLPALSLFFAVAT 395 A G ++QM HGL+A+ LF G L +R RD+ GGL L A+ Sbjct: 354 AMNGVMLQMFNHGLTASILFCFIGFLEQRSGGLRDLDQFGGLRRVAPVFCGLMGISIFAS 413 Query: 396 LGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQ 455 LG+PG F+GEF+I GSF +V T +S GL+ +++ L ++ R + G ++ A Sbjct: 414 LGLPGLNGFIGEFLIFKGSFPIVTWATAMSVIGLLVTAIFLLTIIQRVFNGPLNAKWA-- 471 Query: 456 ELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWF 500 LP ++L+E ++L L++++G YPQ ++ ++ + + Sbjct: 472 GLPDLTLKECLLVLPATALMLVMGIYPQIVIGKINTTVMQMVDLM 516 >UniRef50_Q5FHA2 NADH-quinone oxidoreductase chain M n=11 Tax=Rickettsiales RepID=Q5FHA2_EHRRG Length = 486 Score = 334 bits (858), Expect = 4e-90, Method: Composition-based stats. Identities = 166/487 (34%), Positives = 274/487 (56%), Gaps = 24/487 (4%) Query: 2 LLPWLILIPFIGGFLCWQTE-RFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 +L ++IL+P +G L + + + I+LI+ G T L+ + ++ YS Sbjct: 1 MLLFMILLPILGSCLLTINNFKTTSVLIKVISLISSGATFILNFIIAIKFDYSYK----- 55 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQ-GFFHLN 119 +I + +DGLSL +++LT L +L + S ++ Y F Sbjct: 56 -------GYQFICNLLHGFSIGVDGLSLPLILLTSFLFLLCTVFSLFNMKIYNLRTFIAL 108 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 L+ + G IGVF ++D+ +F+ F+E +L+PM+F+I +WGH + RI A K F+YT Sbjct: 109 LLLLEGLTIGVFASLDIIMFYIFFESVLIPMFFIIGIWGH-----EDRIYATFKLFLYTL 163 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 A L+ LIAI+ + + + +Y +L ++ + L FFI+FA+K+P+VP Sbjct: 164 AGSLLFLIAIIYIYLFSDKVSNIEQLSY--ILPNFLNIKAQKWLWCAFFISFAIKIPIVP 221 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 H WLP+AH QAPT GSV LAGIL+K Y LLRFS+P+ P A+ F+ + L +IG+ Sbjct: 222 FHTWLPNAHVQAPTVGSVLLAGILIKVGTYALLRFSIPMLPEANMYFSNFVIILSIIGVI 281 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 Y + ++F Q++IK+ IAY+S++HMGFV I++ ++ GA+ QMI+HGL +A LF Sbjct: 282 YASLISFVQSNIKKFIAYSSIAHMGFVTAGIFSFNEYGISGAIFQMISHGLISAALFFCV 341 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP 419 G LY+R HT ++ GL M + +FF +A++ +PGT FVGEF+ + G F Sbjct: 342 GMLYDRNHTLEISKYSGLAKVMPKFSIMFIFFTMASIALPGTSGFVGEFLSILGVFHYSK 401 Query: 420 VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLG 479 + + G++ +VY L + +G + S + + ++ ELF++++L L+++ G Sbjct: 402 LFAALIATGVILGAVYMLFLSKEIIWGASNSSLI---VCDLNKNELFILIILATLVLVFG 458 Query: 480 FYPQPIL 486 YP IL Sbjct: 459 IYPYYIL 465 >UniRef50_Q3A816 NADH dehydrogenase I chain M n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A816_PELCD Length = 491 Score = 334 bits (858), Expect = 4e-90, Method: Composition-based stats. Identities = 176/475 (37%), Positives = 270/475 (56%), Gaps = 16/475 (3%) Query: 29 RWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSL 88 R A+IT+ L ++L + G + +W D PWI R+G L +DGLSL Sbjct: 29 RRAAVITVLLEAGVALSFFSGG------TLPSQRWIRFEDWPWIERYGARFSLGLDGLSL 82 Query: 89 LMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLV 148 LMV LT +L +A+ SW+ Q ++ L+ G++GVFLA D+ LF+ WE+ML+ Sbjct: 83 LMVWLTLILLAVAIGISWQ--RYRQAGYYALLLTGGTGILGVFLAQDLLLFYLCWEVMLL 140 Query: 149 PMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYE 208 P+ I LWG G R+ AA K ++T A L+ML+A L L +H TG ++F + Sbjct: 141 PLVLCIFLWG-----GAQRVQAAFKLLVFTLAGSLLMLLAFLTLYILHGRQTGDYSFALQ 195 Query: 209 ELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAA 268 L T + S + L +AF VK+PVVP+HGWLPDA+ +APTA ++ L+G+L K Sbjct: 196 TLTATVVPSAIAPWLFGCLAVAFLVKVPVVPVHGWLPDAYQEAPTAVTLLLSGVLAKAGI 255 Query: 269 YGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLI 328 +GLLR ++PL P FAP+ LG++ I YG W+AF QTD+KRL+AY SV+H+GF+++ Sbjct: 256 FGLLRVAMPLLPATWQSFAPVLAILGLLSIGYGGWLAFVQTDLKRLVAYASVAHLGFIVV 315 Query: 329 AIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALS 388 + G+ +A QG+++Q+ HG++ A LF+L + R +R + +GGLW++ L A+ Sbjct: 316 GMAAGNAIALQGSLLQLFNHGVTTAALFVLVALVKRRTTSRQLPDLGGLWARTPQLGAMF 375 Query: 389 LFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKA 448 L F++ATLG+PG F GE +IL G+F+ + G++ A+ Y+L M+ +G Sbjct: 376 LLFSLATLGLPGLNIFTGEVLILLGAFRAQAWWGAVGMAGVLLAACYTLRMVQGVLWGVP 435 Query: 449 KSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNS 503 + +P M E+ ++ L VL+ G YP P L + I Sbjct: 436 R---GPDPMPDMKRGEMALLAPLAVLVFWFGLYPLPFLKLLSGPVEQILVQLATK 487 >UniRef50_C0Z764 NADH-quinone oxidoreductase chain M n=2 Tax=Bacillales RepID=C0Z764_BREBN Length = 510 Score = 334 bits (858), Expect = 4e-90, Method: Composition-based stats. Identities = 157/517 (30%), Positives = 257/517 (49%), Gaps = 30/517 (5%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL L+ P + + V + + + L L+ ++ Y Sbjct: 5 LLSSLVFSPLLAIIVMAFIPNRHAGVIKQVGIYGTLPALILAGWMFGMFNY------ETA 58 Query: 62 QWQSEFDMPWIP------------RFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI 109 Q WI F I+ L IDG+S+ +++LT ++G LA + SW+ I Sbjct: 59 NLQFVEKHSWISIPIGMAQAGTVFAFEINYELGIDGISMPLILLTAIIGTLAAIASWQ-I 117 Query: 110 EKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRIT 169 +K Q + + +L G++GVF A ++FLFF F+E+ LVPMYFLI +WG+ R Sbjct: 118 KKRQKEYFILFHLLLIGMLGVFAADNLFLFFIFFELTLVPMYFLIGIWGYG-----EREQ 172 Query: 170 AATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTP----MSSGVEYLLML 225 AA KF +Y +ML+A + + + P ++ + + + L Sbjct: 173 AANKFLLYNGIGSGIMLLAFIVIFVIMRTLNIDEITAILTTPGHPITEILTPEMRFGIFL 232 Query: 226 GFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAE 285 FIAFA+K+PV P H W+ H QAP + + +GILLK AYGLLR + FP + + Sbjct: 233 VLFIAFAIKLPVFPFHTWMLRVHVQAPPSIVMIHSGILLKMGAYGLLRMGIGFFPEQAYD 292 Query: 286 FAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQM 345 F+ LG+I I YGA +AF Q D+K ++AY+S+SHMG VL+ + + + +QGA+ Q+ Sbjct: 293 FSMWIAVLGIINILYGAVLAFVQKDLKMVLAYSSISHMGIVLLGFASMNTIGFQGAMFQV 352 Query: 346 IAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFV 405 ++HG +A LF L G +++R T + +GGL M ++ + L +A+LG+PG F+ Sbjct: 353 VSHGFISALLFFLIGVIWDRTQTSMLDDLGGLAKSMPFVSGVLLAGGMASLGLPGMSGFI 412 Query: 406 GEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLREL 465 EF G F +PV+ + G+V +VY L + + FG + L E+ Sbjct: 413 SEFFAFLGLFGRLPVMAAVGAIGIVLTAVYLLRAILKTTFGPTPGRCT--GLADAQPMEV 470 Query: 466 FMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVN 502 +++L+ ++L+G YP + + A+ I Sbjct: 471 IPMVVLLGCIILIGVYPAVLGNPMQQALKTIVPIVTG 507 >UniRef50_Q11VC4 NADH dehydrogenase I chain M n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VC4_CYTH3 Length = 487 Score = 333 bits (856), Expect = 6e-90, Method: Composition-based stats. Identities = 155/508 (30%), Positives = 269/508 (52%), Gaps = 21/508 (4%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 M+ LI P + + + ++ I +I + AL + ++ Sbjct: 1 MITTLLIFFPLVAALIVFIAG---QRMAPAIGIIATLIEFALGIFAYVNFD-------AA 50 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 W E +PWI I+ + +DG+SL +V+LT L L +L S K + F++ Sbjct: 51 AGWNYEIVLPWISTLNINYAVGMDGISLALVLLTTFLLPLILLASLSGSLKNKKGFYVLA 110 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + + +IGVF + D+FLF+ FWE+ L+P+YF+ LWG + R KFFIYT Sbjct: 111 LIMQSALIGVFTSKDLFLFYIFWELALIPIYFICLLWG-----DENRKFVTFKFFIYTLF 165 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 L+ML AI+ L + V +F E + NT +++ + + F+AF +KMPV PL Sbjct: 166 GSLIMLAAIIYLY----SVAPVKSFAMENIYNTSLTTCEQVWIFAALFLAFGIKMPVFPL 221 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H W P ++ AP AG++ L+GI+LK YG++R+ LP+ P A ++ +AM L +IGI Y Sbjct: 222 HTWQPSTYTSAPVAGTMLLSGIMLKMGIYGVIRWILPVLPTALMDWGWLAMLLAIIGIIY 281 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 + +A Q++ K LIAY S++H+G + ++T S QG + QM+AHG++ G+ + Sbjct: 282 ASIIAIKQSNYKTLIAYVSIAHVGLIAAGLFTNSVEGLQGVIAQMLAHGVNVVGILFVVE 341 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 L R T ++ +GGL ++M + +A++ +P T FVGEF++ G F + P Sbjct: 342 ILLNRTGTLEIAKLGGLRNQMPQFAVFFVVIMMASIALPSTNGFVGEFLLFVGIFNINPY 401 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 + ++ ++ +VY L+ + G+A+S+ + ++L E +++ +V+++ +LG Sbjct: 402 LAAVAGITIILGAVYMLSSYQKIMLGEARSEYD--GVVDLTLLEKSILIPIVIVIFVLGL 459 Query: 481 YPQPILDTSHSAIGNIQQWFVNSVTTTR 508 +P ILD + A+ I NS+ Sbjct: 460 FPNLILDLTEPAVNGILHSVHNSIPVAN 487 >UniRef50_C7M2U9 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2U9_ACIFD Length = 512 Score = 333 bits (855), Expect = 9e-90, Method: Composition-based stats. Identities = 164/508 (32%), Positives = 266/508 (52%), Gaps = 18/508 (3%) Query: 2 LLPWLILIPFIGGFLCWQ--TERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAG 59 LL WL+ +P IG + R + R + + L +++ L ++ G Sbjct: 3 LLDWLVAVPVIGALIVPMMALPREQAWLVRAFGIAMSIVELGIAVLLAVRFH------IG 56 Query: 60 IPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLN 119 P +Q D+ W+ G+ +L DG+SL++V++T +L V+A+ + + Sbjct: 57 APGFQDTQDLRWMGALGVHWYLGADGISLVLVIMTAVLFVIAMAAIKGVTD--VRAYVGW 114 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 ++ + +G F+++D+ LFF F+E+ LVP YFLIA +G S AA KFF+YT Sbjct: 115 MLLLEAACMGSFVSLDLLLFFVFFELSLVPAYFLIADFGFLGSGR-----AAIKFFVYTF 169 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 A ++L+ I+ALV +H + TG TF L +T +++ LL L F AFAVK P+ P Sbjct: 170 AGSALLLVGIIALVVIHDHQTGNLTFALPALEHTRLAASTSLLLFLAFTAAFAVKTPIFP 229 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 H W PD +++AP V +AG++ K +YG++RF L LFP S + A + + L V GI Sbjct: 230 FHTWSPDTYAKAPIPAVVIVAGVMAKLGSYGIVRFDLGLFPGTSRQLAWLMLTLAVAGIL 289 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 +GA +A + + RL+ Y+S+SHMGF+++ I+ S G+V+QM+ HG+ A +F+L Sbjct: 290 WGAIVAAGERHLGRLVGYSSLSHMGFIVLGIFAFSTEGLAGSVLQMVNHGIYTAAMFLLL 349 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP 419 G +Y+R T D +GGL L +A G+PG FVGEF+IL G+F Sbjct: 350 GMIYDRSGTLDASRLGGLQRHAPVLAGAFTVVVMAQAGLPGLNGFVGEFLILVGTFVTHR 409 Query: 420 VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLG 479 V++ G+V ++ Y L R + + + + RE+ +I L+ ++V LG Sbjct: 410 WWAVVAVAGVVGSAAYLLWAYQRVFHRAPSED---RVVHDLQWREVALIAPLLAIIVFLG 466 Query: 480 FYPQPILDTSHSAIGNIQQWFVNSVTTT 507 YP+P+L A I + Sbjct: 467 VYPRPVLSAIDPATSAIVARANRAPLPV 494 >UniRef50_A5FKK8 NADH dehydrogenase subunit M n=2 Tax=Flavobacterium RepID=A5FKK8_FLAJ1 Length = 483 Score = 332 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 154/507 (30%), Positives = 263/507 (51%), Gaps = 24/507 (4%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 M + +++I +G F+ + K+ +AL L S+ L S Sbjct: 1 MNVSLILIILLVGAFVTYFAG---DKIASKVALFFSLAALGCSVVLLNHFNAGENISLIN 57 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 WI + IS L DGL+L M++LT L + + S+ K F+ + Sbjct: 58 A---------WITQPKISFALNADGLALAMLLLTTALTPIIIFSSFGNEYKNAKAFYALI 108 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 +++ + G FLA D L++ FWE+ L+P+YF+ +WG+ D + R A KFFIYT A Sbjct: 109 LFMAFAMTGTFLAADGLLYYIFWELALIPIYFIALIWGNG--DAEERRKAVVKFFIYTLA 166 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 L ML A + L +F E+L +S+ ++ + L FF+A+A+K+P++P Sbjct: 167 GSLFMLTAFIYLYQK------AGSFLIEDLYKVQLSACEQFWIFLAFFLAYAIKIPIIPF 220 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H W + + +APT G++ L+GI+LK Y ++R+ LP+ +A+ EF I + LG+ G+ Y Sbjct: 221 HTWQANVYQKAPTVGTMLLSGIMLKMGLYSVIRWQLPIAADAAIEFKNIFIALGIAGVIY 280 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 G+ +A Q D+K+L+AY+S++H+G + YT + ++GAV+QMIAHG GLF Sbjct: 281 GSIVALRQKDLKKLLAYSSLAHVGLIAAGAYTLTLDGFRGAVLQMIAHGFVVVGLFYAAE 340 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 +Y R TR++ +GG+ ++ ++ L +A++ +P T NFVGEF +L+ Q+ Sbjct: 341 IIYRRFETRNISELGGIRTQSPKFTSMFLILVLASVALPTTFNFVGEFTVLYSLSQINIW 400 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 V+ ++ + Y L M G+ S+I +S+ E + ++ +L+ GF Sbjct: 401 FAVLGGTTIILGAYYMLKMFQNVMLGETNSKI----FADVSINEGISMAAIIAVLIFFGF 456 Query: 481 YPQPILDTSHSAIGNIQQWFVNSVTTT 507 YP+PI D ++ I +T Sbjct: 457 YPKPITDLITPSLETILSVIEKKYSTL 483 >UniRef50_B3EIA1 Proton-translocating NADH-quinone oxidoreductase, chain L n=27 Tax=cellular organisms RepID=B3EIA1_CHLL2 Length = 770 Score = 332 bits (852), Expect = 2e-89, Method: Composition-based stats. Identities = 114/520 (21%), Positives = 209/520 (40%), Gaps = 51/520 (9%) Query: 5 WLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQ 64 ++L+P + + + + +I + +G T ALSL ++ A W Sbjct: 10 AVLLLPLLSFVILIFFNKRLPRRGDFIGVGILGTTFALSLYIFWSVVVQAYDPAFRVAWD 69 Query: 65 SEF----DMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI--EKYQGFFHL 118 + ++P + I + + ID L+ +M+ + L+ L L S + + G F Sbjct: 70 FTWIDLGNVPGVGPLVIKMGIVIDNLTAIMLAMVTLISFLVHLYSTGYMAGDPRYGRFFA 129 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 L ++G+ L+ ++F + FWE++ + Y LI + K S A K F+ Sbjct: 130 YLGIFTFSMLGIVLSDNLFAIYIFWELVGLSSYLLIGFYFEKDSAAD----AQKKAFLAN 185 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 + + M + IL L + + F MS + F+ K Sbjct: 186 RVGDIGMWLGILILYSQFHTFSYQEIFANLAAGKFGMSQAWLTAAGILLFMGCVGKSAQF 245 Query: 239 PLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 PLH WLPDA + PT S A ++ Y + R + L +A + ++G Sbjct: 246 PLHVWLPDAM-EGPTPVSALIHAATMVAAGVYFVARIFVLLTADALH----VIAFIGAFT 300 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 F A +A Q DIKR++AY++VS +G++++ + G AY A+ ++ H A LF+ Sbjct: 301 AFMAATIAITQHDIKRVLAYSTVSQLGYMVLGLGVG---AYSAALFHLVTHAFFKACLFL 357 Query: 358 LCGQLYER-IHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ 416 G + H +DMR MGGL M W A +A G+P T F+ + IL G+ Sbjct: 358 GSGAIIHAMHHEQDMRWMGGLRKNMPWTFATFTLATLALAGLPLTSGFMSKDAILAGAIG 417 Query: 417 V--------VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIAS-------------- 454 +I + F + + Y + +FG++++ + Sbjct: 418 FANAEGGGIYYLIPFLGFFSAMLTAFYMGRQIWLVFFGESRTHLKPADDHHHGHDAHAAH 477 Query: 455 ---------QELPGMSLRELFMILLLVVLLVLLGFYPQPI 485 + ++ +++L L + + P P+ Sbjct: 478 GHDDHHEEAHGVHEVAWNMRTPLVILAALSIFAVYSPDPL 517 >UniRef50_C9MQ80 NADH dehydrogenase, M subunit n=18 Tax=Bacteroidales RepID=C9MQ80_9BACT Length = 503 Score = 332 bits (851), Expect = 2e-89, Method: Composition-based stats. Identities = 149/510 (29%), Positives = 238/510 (46%), Gaps = 17/510 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L ++IP + LC R + + L ++ L + Sbjct: 4 ILTVFVIIPVL--MLCGLWVAKNDNQVRGMMVAGSTALLIGAIWLTVYFVQQRNAGNHDA 61 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 + W I+ + +DG+S++M++L+ ++ SW+ +E + + L + Sbjct: 62 -MLLANSVMWFKPMHIAFSVGVDGISVVMILLSAIIVFTGTFASWQ-LEPMKKEYFLWFV 119 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + GV G F++ DMF F F+E+ L+PMY LI +WG + +A K + Sbjct: 120 LLASGVFGFFISTDMFTMFMFYEVALIPMYLLIGVWGTGP-----KEYSAMKLTLMLMGG 174 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 ++++ IL + + T E M ++ + FI F V + P H Sbjct: 175 SALLILGILGIYYFSGATTMDV---IELARMHAMPKNIQNIFFPFVFIGFGVLGALFPFH 231 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 W PD H+ APTA S+ AG+L+K YG LR ++ L P+A +API + L I + YG Sbjct: 232 TWSPDGHASAPTAVSMLHAGVLMKLGGYGCLRIAMFLMPDALQTWAPIFLVLTTISVVYG 291 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 A A QTD+K + AY+SVSH G VL A+ +Q A GA++QM++HGL A F G Sbjct: 292 ALSACVQTDLKYINAYSSVSHCGMVLFALVMTTQTAITGAILQMLSHGLMTALFFACIGM 351 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ----V 417 +Y R TRD+R +GGL + +L + +A LG+PG FV E I GSF+ Sbjct: 352 IYHRAGTRDVRYLGGLMKVIPFLAVSYVVAGLANLGLPGFSGFVAEMTIFVGSFENAGTF 411 Query: 418 VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVL 477 V T+I+ +V +VY L ++ + F K ++ EL + E F I L+ + Sbjct: 412 HRVATIIACTAIVITAVYILRVVGKILFQKIPNK-KFYELHDATWDERFAIGCLIFCVAG 470 Query: 478 LGFYPQPILDTSHSAIGNIQQWFVNSVTTT 507 LG P + A+ I + V T Sbjct: 471 LGLCPLFFENMIIDAVHPIFDHIITYVPTL 500 >UniRef50_Q1ZRW3 NADH dehydrogenase I, M subunit n=2 Tax=Photobacterium RepID=Q1ZRW3_PHOAS Length = 500 Score = 332 bits (851), Expect = 2e-89, Method: Composition-based stats. Identities = 174/507 (34%), Positives = 278/507 (54%), Gaps = 14/507 (2%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L LI +P + L + R + R + L T+ + L +++ + + Sbjct: 1 MLSLLIFLPMVAALLIGSSCRKLPFIARSMTLTTLIIESMLVAWIFI--------THQVH 52 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 + + WIP FGI +++DG+SL ++ LT L ++A+L +W ++ ++Q F ++ Sbjct: 53 GFSMTESLNWIPDFGIKYLVSMDGISLSLIGLTCTLFIVAMLVAWHQVNRWQA-FGPLML 111 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 L G++G FLA+D+ LF+ FWE+ML+P+YF+++ WG GK AA KF + T Sbjct: 112 LTLSGIMGAFLALDLMLFYVFWELMLIPIYFMLSFWG-----GKDTKQAALKFVLVTITG 166 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 L+ML++++AL ++ N TGVWTF+Y L + P+ + ++ GF IAF +K+P P H Sbjct: 167 SLLMLVSLVALYIINGNNTGVWTFDYFYLASHPIMGELAIPVVCGFLIAFLIKIPGFPFH 226 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 W PD + + A S+ L+G++ AYG+LRF L +FP A + I M LG IG Y Sbjct: 227 FWAPDTYREGAPAVSLLLSGVMANVGAYGILRFCLAIFPEAMHQMMYIGMALGAIGSLYA 286 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 A +AF Q D++ +IAY+S+SHM V++AI+ A GAVIQ+IAHGLS AGLF + Sbjct: 287 ALLAFRQKDLRNVIAYSSISHMNLVVLAIFAWQLQALNGAVIQLIAHGLSVAGLFAVVRM 346 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 L R + MGGL+ + + LF A++G+PG GNF GE ++L GSF V P+ Sbjct: 347 LQARGFSGKFDEMGGLYKVLPGIGVFLLFIVAASVGIPGLGNFAGEILLLAGSFSVSPLW 406 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 T ++ F +V VY L A+ G ++L ++ RE ++V+ L +G Sbjct: 407 TSLAAFSIVLGVVYFLRAYGLAFLGPISDDNEQRKLIDLTAREKLTASIIVIGLFWVGLE 466 Query: 482 PQPILDTSHSAIGNIQQWFVNSVTTTR 508 P +L S+ + S + Sbjct: 467 PNYLLQLMMSSTKTLASIHSGSYSLIE 493 >UniRef50_UPI0001C3347B NADH dehydrogenase subunit M n=6 Tax=Cyanobacteria RepID=UPI0001C3347B Length = 486 Score = 332 bits (851), Expect = 3e-89, Method: Composition-based stats. Identities = 164/500 (32%), Positives = 274/500 (54%), Gaps = 22/500 (4%) Query: 2 LLPWLILIPFIGG-FLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 +L LI +P + + + ++ R A+ + L L+L + + + Sbjct: 3 VLSCLIWLPLLSAILIIFFFKQQDSNYCRLFAIFISIILLILTLVIIFKFNIN------D 56 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 P+ Q WI + G++ L +DGL L ++ L L + S + + Q F++ + Sbjct: 57 PEIQFYESFLWIKKIGLNYSLGVDGL-SLPLLCLNNLLTLITIYSSGKNIQKQNFYYGLI 115 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + G+ G FL+ D+ LF F+E+ +P+YFL+ +WG G R A+ KF IYT Sbjct: 116 FILNSGISGAFLSQDLLLFLIFYELETIPLYFLLVIWG-----GIKRDYASIKFLIYTSI 170 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 SG+++LI+ L LV++ + TFNY L + +S + L++ I ++K+P+VP Sbjct: 171 SGILVLISFLGLVWL----AEIPTFNYWSLRSHSLSLTHQLFLLIPLLIGLSIKIPIVPF 226 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H WLPD H +A T S+ LAGILLK YGLLRF + LFP+ +P+ L V+ Y Sbjct: 227 HSWLPDTHVEASTPVSILLAGILLKLGTYGLLRFGIGLFPDGWVFLSPVLATLAVVSALY 286 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 GA A AQ D+K+++AY+S++HM ++L+A + L+ AV QMI+HGL +A LF+L G Sbjct: 287 GASCAIAQKDMKKVVAYSSIAHMAYILLASSASTPLSLNAAVFQMISHGLISALLFLLVG 346 Query: 361 QLYERIHTRDMRMMGGLWSK---MKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV 417 +YE+ +RD+ + GL++ + +L + +A+ G+PG F+ EF++ GSF V Sbjct: 347 IVYEKTGSRDVDFLSGLFNSQHGLPITGSLIILGVMASSGIPGMIGFIAEFLVFRGSFPV 406 Query: 418 VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVL 477 P+ T++ G +VY L M++R +FG+ ++ + +P + E LLL VL++ Sbjct: 407 FPIQTLLCLIGSGLTAVYFLLMVNRVFFGRLTPRLVN--IPRIYWSERSPALLLTVLIIT 464 Query: 478 LGFYPQPILDTSHSAIGNIQ 497 LG P +L S ++I + Sbjct: 465 LGIQPNWLLRWSETSINILL 484 >UniRef50_B9W1R4 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Glomus intraradices RepID=B9W1R4_GLOIN Length = 499 Score = 332 bits (851), Expect = 3e-89, Method: Composition-based stats. Identities = 153/513 (29%), Positives = 265/513 (51%), Gaps = 27/513 (5%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L L+LIP IG + + R +AL+ ALSL LW + + + Sbjct: 1 MLTVLLLIPLIG-VIGIILGCSNERQSRQVALLVSLANFALSLVLWGEYDGNCSH----- 54 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQG------F 115 +F W + +DG+SL V+LT + +L + G Sbjct: 55 ---FQFVQDWSSVTFCHFIIGLDGISLFFVLLTTFIIPTCILGTPNLTSNQSGNISAVKS 111 Query: 116 FHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFF 175 F ++L+ I +I +F+ +D+ LF+ +E +L+P++ +I +W H + ++ A+ F Sbjct: 112 FLISLLVIETLLIALFVVLDLLLFYICFESVLIPLFLMIGIWSH----SQHKVRASFMLF 167 Query: 176 IYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKM 235 +YT L ML++ +AL + + +Y+ + + + ++ +L LG F+A A+K Sbjct: 168 LYTLFGSLFMLLSFIALYMS------IGSTDYQLIATSCIQPEIQKILWLGIFLALAIKT 221 Query: 236 PVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGV 295 P+VP H WLP AH++AP AGS+ LAG++LK A YG LR LPLFP AS+ + P+ L Sbjct: 222 PLVPFHIWLPLAHTEAPLAGSMLLAGVILKMATYGYLRILLPLFPEASSYYTPLVYTLCT 281 Query: 296 IGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGL 355 I I Y + Q ++K +IAY S+SHM + +++ + +G+++ +AHGL++ L Sbjct: 282 ISIIYTSLSTLRQINLKSIIAYASISHMAIATMGVFSNNVQGIEGSILLSVAHGLASPAL 341 Query: 356 FILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSF 415 FI G LY+R HT + GL S M L F +A + +P T NF+GEF+ G++ Sbjct: 342 FISVGVLYDRWHTLILPYYRGLTSTMPLFSLLFFIFCLANMAVPLTANFLGEFLSFAGAY 401 Query: 416 QVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLL 475 Q P IT++++ +V + Y++ +R G + +S RE F++L ++L+ Sbjct: 402 QRNPFITILASSSVVLTAAYTIWTYNRVCLGSPSRYL--YPCLDISRREFFLLLPFLLLI 459 Query: 476 VLLGFYPQPILDTSHSAIGNIQQWFVNSVTTTR 508 +LG P ILD+ H ++ ++ ++ Sbjct: 460 FVLGIVPFVILDSLHFSVSSLIYSKISPFQAVP 492 >UniRef50_C5C0R5 Proton-translocating NADH-quinone oxidoreductase, chain M n=3 Tax=Actinomycetales RepID=C5C0R5_BEUC1 Length = 507 Score = 331 bits (849), Expect = 5e-89, Method: Composition-based stats. Identities = 171/508 (33%), Positives = 258/508 (50%), Gaps = 26/508 (5%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 + LI++P + L W + R I L+ L ++ + Q + A Sbjct: 7 ITTLIVVPLVAAVLVWLVPALH-RASRIIGLVVSVAVLGGAIAMATQF-----EVADAAV 60 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIE------------ 110 Q WIP G S + + GL LLMV+L L L + W + Sbjct: 61 PQFTETHSWIPAIGASYAVGLTGLGLLMVLLATFLVPLVLAAGWNDARDDAVGAPGSRAA 120 Query: 111 -KYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRIT 169 + Q ++ + +I VF A D+FLF+ +E ML+P+YFLI L+G G R Sbjct: 121 LRRQAGMVALVLALEAMMIAVFAAQDVFLFYVLFEAMLLPVYFLIGLYG-----GPARRA 175 Query: 170 AATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFI 229 AA KF +Y+ A GL+ML ++A+ F G F L ++ L FFI Sbjct: 176 AAVKFLLYSLAGGLIMLAGVIAVYFQ--GPGGPDGFLIANLSGVVADPVLQRWLFAAFFI 233 Query: 230 AFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPI 289 AFAVK P+ P+H WLPDA +QAP S L G+L K +G++ LPLFP ASA AP Sbjct: 234 AFAVKAPMWPVHTWLPDAAAQAPAGTSTLLVGVLDKVGTFGMIALCLPLFPEASAWAAPA 293 Query: 290 AMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHG 349 + L ++ I YG +A Q D+ R +A+TSVSH GF+++ IY GS +A GA++ M+AHG Sbjct: 294 IIVLALVSIIYGGLVAIGQQDLMRFVAFTSVSHFGFIVLGIYVGSSVALTGAMLYMLAHG 353 Query: 350 LSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFM 409 +S AGLF++ G L +R +R + GGL + + L +A++ +PG FV E++ Sbjct: 354 ISTAGLFLVSGFLTDRGKSRRIDDYGGLQKVTPVIAGIFLVSGLASIALPGLSGFVPEYL 413 Query: 410 ILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMIL 469 +L GSF V V++T G++ A++Y L R + G LP + RE ++++ Sbjct: 414 VLLGSFDASAVAGVVATAGVIIAAIYVLLTYQRIFTGPPPGDGPLASLPDLGGRERWVMV 473 Query: 470 LLVVLLVLLGFYPQPILDTSHSAIGNIQ 497 +V +++LGFYP P LD + Sbjct: 474 PIVAAMLVLGFYPAPALDVLTPISDVLA 501 >UniRef50_Q9ZJV5 NADH oxidoreductase I n=12 Tax=Helicobacter RepID=Q9ZJV5_HELPJ Length = 512 Score = 330 bits (846), Expect = 9e-89, Method: Composition-based stats. Identities = 152/500 (30%), Positives = 263/500 (52%), Gaps = 19/500 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL +I P + L + + R A++ + L L L LW Sbjct: 8 LLSVVIFFPMLSALLAFFM---SDQASRAYAIVIALIELLLVLLLWHGFD------IQTA 58 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q E + G++ H+ +DG++L +++L ++ +L+V+ +++ + F + L+ Sbjct: 59 GMQFEEMKELAYQIGVNYHVGVDGIALFLLLLNAIVVLLSVIY----VKERRKDFVICLL 114 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + G ++GVF ++++ F+ FWE+ L+P+ +LI +G +I + KFF+YT + Sbjct: 115 LLEGILMGVFSSLNVIFFYAFWEISLLPVLYLIGRFG-----RNNKIYSGMKFFLYTFLA 169 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 L ML+ IL + + + N G+ +F+ + SSG++ L + F I AVK+P+ PLH Sbjct: 170 SLCMLLGILYIGYDYANNYGMMSFDILDWYQLNFSSGIKTWLFVAFLIGIAVKIPLFPLH 229 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLP A+S APT GSV L+ +L K Y LLRF LPLFP S + + + I YG Sbjct: 230 TWLPYAYSNAPTLGSVMLSALLSKMGTYALLRFLLPLFPELSEIYLTPIAIVALCMIIYG 289 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 ++A+AQ D+K LIAY+S SHMG V++ +++ + GAV M AHG+ GLF+L G Sbjct: 290 GFLAYAQKDLKTLIAYSSFSHMGVVVLGVFSFNVEGVSGAVFMMFAHGVIVMGLFLLAGI 349 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 L ER + ++ G + A + +A +GMP + FVGEF+ L G F P++ Sbjct: 350 LEERASSLEIARFGSIAKSAPVFAAFFMIVLMANVGMPLSIGFVGEFLSLLGFFATYPLL 409 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQE-LPGMSLRELFMILLLVVLLVLLGF 480 +I+ ++ ++VY L +FG K+ ++ RE+ ++ +++ L+++LG Sbjct: 410 AIIAGTSIILSAVYMLTSYKDVFFGNLKTGNNQISVFEDLNAREVGVLSVILALILILGI 469 Query: 481 YPQPILDTSHSAIGNIQQWF 500 YP+ +L + + Sbjct: 470 YPKALLKPIEQGSKQLLEVI 489 >UniRef50_C2KMP1 NADH dehydrogenase (Quinone) n=4 Tax=Actinomycetaceae RepID=C2KMP1_9ACTO Length = 544 Score = 329 bits (845), Expect = 1e-88, Method: Composition-based stats. Identities = 166/502 (33%), Positives = 262/502 (52%), Gaps = 14/502 (2%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L L+ P + + W + + R IAL + LA L A P Sbjct: 19 LTLLVAWPLVFALVLWLVKPLRP-LGREIALAVSLVELAGVLVAAATSYN----PAAAPA 73 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF--FHLNL 120 +Q PWIP G+S L ++GL L+M++L L L +L SW+E + + + Sbjct: 74 FQLGESYPWIPAIGLSWALGVNGLGLVMIILATALTPLVILSSWREDQDADARAGYAGLI 133 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + + ++ +F A D+ LF+ +E MLVP+YFL+ +GH + R AA KF +Y+ A Sbjct: 134 LGLEACMVLIFTARDLLLFYLTFEAMLVPLYFLVGRFGHG--EAARRRHAAIKFVLYSLA 191 Query: 181 SGLVMLIAILALVFVHYNATGV--WTFNYEELLNTPM-SSGVEYLLMLGFFIAFAVKMPV 237 GLVML ++A+ T F+ + L + S+ + Y M F +AFA+K P+ Sbjct: 192 GGLVMLFGVIAVYVGAAPVTKSPAGLFHMDNLTALDLGSNPLAYFTMWTFLLAFAIKAPM 251 Query: 238 VPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 VP+H WLP + A SV L G+L K +G++ F LFP ASA AP+ + L VI Sbjct: 252 VPVHTWLPTTAAVARGGTSVLLVGVLDKVGTWGMIMFCWQLFPAASAAVAPLVIVLAVIS 311 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 I +GA A A D+ RL+++TS+SH GF+++A+Y GSQ A +GA++ M+AHG+S AG+F+ Sbjct: 312 ILWGALAAIASKDLMRLVSFTSISHFGFMVMALYIGSQTAIEGAMLYMVAHGVSIAGMFL 371 Query: 358 LCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV 417 L G L ER T+++ G L L L +A +G+PG F+ E++IL G+F+V Sbjct: 372 LSGWLTERGGTQEIAAYSGFQRVTPTLAGLFLTSGLAAIGLPGLSGFLPEYLILVGTFKV 431 Query: 418 VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVL 477 + + G+V A+VY L + G + + P + RE +++ +++ ++ Sbjct: 432 SLAAALFAVLGVVLAAVYLLLPYQNLFTGP--TDARVRTAPDLGSREKLIMVPVILAMLG 489 Query: 478 LGFYPQPILDTSHSAIGNIQQW 499 LGF P P LD + Sbjct: 490 LGFLPGPTLDLMKPDAAEMYAV 511 >UniRef50_D1PWI6 Proton-translocating NADH-quinone oxidoreductase n=6 Tax=Prevotella RepID=D1PWI6_9BACT Length = 507 Score = 329 bits (845), Expect = 1e-88, Method: Composition-based stats. Identities = 149/508 (29%), Positives = 244/508 (48%), Gaps = 15/508 (2%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQG-GYSLTQSAGIP 61 L ++IP + W R + ++ LAL++ L G T A Sbjct: 4 LTLFVVIPLLMLLGLWIAR--NDSQVRGVMVVGSVALLALAIYLVFAFLGARATMPAEQY 61 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 + +PW I +DG++++M++L+ ++ + SW+ + Q + L Sbjct: 62 PFLFGDAIPWFEPLNIFYRTGVDGIAVVMILLSAIIVITGTFASWQ-LHPMQKEYFLWFT 120 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + GV G F++ D+F F F+E+ L+PMY LI +WG + +A K + Sbjct: 121 LLSAGVFGFFISEDLFTMFMFYEVALIPMYLLIGVWGTGP-----KEYSAMKLTLMLMGG 175 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLN-TPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 +++I IL + F + +G +T + + + V+ + FI F V + P Sbjct: 176 SALLIIGILGIYFFNGQYSGTYTMDVVAIAQSHAIPVFVQKVFFPFIFIGFGVLGALFPF 235 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H W PD H+ APTA S+ AG+L+K YG R ++ L P+A+ E I + L I + Y Sbjct: 236 HTWSPDGHASAPTAVSMLHAGVLMKLGGYGCFRVAMFLLPDAARELCWIFLILTTISVVY 295 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 GA A QTD+K + AY+SVSH G VL A+ +Q A GAV+QM++HGL A F + G Sbjct: 296 GALSACVQTDLKYINAYSSVSHCGLVLFALCMMTQTAINGAVLQMLSHGLMTALFFAVIG 355 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 +Y R TRD+R +GGL + +L + +A LG+P FV E I G+FQV Sbjct: 356 MIYHRTGTRDVRRLGGLMKILPFLSVAYVVAGLANLGLPLFSGFVAEMNIFVGAFQVNDT 415 Query: 421 I----TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLV 476 T+I+ +V +VY L ++ + + K +Q +L + E + L+ + Sbjct: 416 FHRTCTIIACTSIVITAVYILRVVGKILYQKVPNQ-DYYKLTDATWDERLAVGALIFCVA 474 Query: 477 LLGFYPQPILDTSHSAIGNIQQWFVNSV 504 LG +P + A+G + Q + S Sbjct: 475 GLGTFPLWAQSIINDAVGPMIQHIMGST 502 >UniRef50_A7UQZ1 AGAP012727-PA (Fragment) n=1 Tax=Anopheles gambiae str. PEST RepID=A7UQZ1_ANOGA Length = 458 Score = 329 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 154/471 (32%), Positives = 254/471 (53%), Gaps = 23/471 (4%) Query: 28 PRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLS 87 ++IAL+ L +ALS + ++ T + Q + + P S+HL +DGLS Sbjct: 1 AKYIALVLAFLEMALSFYMLSGLDFAATIDSQ--NLQYQINTPESSFLKTSLHLGVDGLS 58 Query: 88 LLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMML 147 +L ++LT +L L +L S+ + KY+ F+ ++ + G+IGVF ++D +F+ FWE+ L Sbjct: 59 MLFILLTTILTSLIILSSFSQTVKYKNTFYGLILLMQFGLIGVFTSLDGLMFYAFWEVTL 118 Query: 148 VPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNY 207 +P++F+ LWG + ++ TKFF+YT L ML ++ + +F Sbjct: 119 IPIWFICGLWGQED----QKLRFTTKFFVYTFIGSLFMLGGLIYVY------NHSASFAL 168 Query: 208 EELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTA 267 ++ N+ ++ + ++ F+AFAVK+PV P H W PD ++ +PT G++ L+GI+LK A Sbjct: 169 LDMYNSDLNVTQQTIVFWFIFVAFAVKLPVFPFHTWQPDTYTYSPTEGTMLLSGIMLKMA 228 Query: 268 AYGLLRFSLPLFPNASAEF-APIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFV 326 +G+LR+ LP+ P A I + L +IGI YGA +A + DIKR+I Y+S+SH+G + Sbjct: 229 IFGVLRYLLPIAPGAIMGISGQIVLTLAIIGIVYGALIAIVKNDIKRIITYSSLSHIGLI 288 Query: 327 LIAIYT---------GSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGL 377 + I+ + +GAVIQ AHG++ GLF LY R TRD+R MGGL Sbjct: 289 VAGIFASAILTLNGRFTTEGAEGAVIQAFAHGINIVGLFYCADILYRRFKTRDIRQMGGL 348 Query: 378 WSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSL 437 L L ++ +P T F+GEF++L +IS ++ +VY L Sbjct: 349 AKVAPKFAVLFLIIVFGSMAVPLTNGFIGEFILLKSISDYNTTAVIISGLTVILCAVYML 408 Query: 438 AMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDT 488 M +A FGK + + + +S E ++ LVV ++L G +P IL+ Sbjct: 409 RMYGKAMFGKGDEVLLA-NMKDVSGVEFSVLASLVVFVILFGIFPNSILEM 458 >UniRef50_Q12ZH7 Na+/H+ antiporter subunit n=2 Tax=Methanosarcinaceae RepID=Q12ZH7_METBU Length = 788 Score = 329 bits (844), Expect = 2e-88, Method: Composition-based stats. Identities = 110/511 (21%), Positives = 204/511 (39%), Gaps = 32/511 (6%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 + I +PFI L E+ + W A T + AL + Sbjct: 7 ITVAIFLPFIFAGLVPVMEKLLKQRVGWFAAATALASFALIGMAATEVIEGQIIQG---- 62 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEK--YQGFFHLNL 120 + WIP G++ + DGL+ ++ + +GVL + S + + ++ L Sbjct: 63 -----SISWIPSAGVNFTIYADGLATMIGFIASGIGVLIMSYSNGYMSRTEDLTRYYQYL 117 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + +G +IG+ + + F FWE+ + + LI W HK I ATK + T + Sbjct: 118 LLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHKPE----SIYGATKSLLLTAS 173 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 GL ML L L + + N +++N + + ++ I A K P Sbjct: 174 GGLAMLAGFLLLGNITGSFELAAILNDPQVINAIKEHELFLITLILILIGAAAKSAQGPF 233 Query: 241 HGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 + WLP+A +APT S + ++K Y + R + + + + G+I + Sbjct: 234 YIWLPNAM-EAPTPVSAFLHSATMVKAGIYLVARIHPIF--SGTEAWFILVSGTGIITML 290 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQ----LAYQGAVIQMIAHGLSAAGL 355 ++AF QTDIK ++AY+++S + +++ + + A ++ H A L Sbjct: 291 VAGFLAFRQTDIKGILAYSTISQLAYMMTMYGYTTHHEPGIGVAAATFHLLNHAAFKACL 350 Query: 356 FILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSF 415 F++ G + TRD+R +GGL +M ++ +A G+P F+ + M S Sbjct: 351 FLVAGIVAHEAATRDIRKLGGLRREMPITFIIACIAGLAMAGIPPLNGFLSKEMFYESSI 410 Query: 416 QVV--------PVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFM 467 ++ +I + G VF YS+ ++ + G+ + + L Sbjct: 411 EMGASIGGIFTFLIPAFAVLGGVFTFAYSIKLIDGIFLGERDKNAIPHHIHEPPMTMLIP 470 Query: 468 ILLLVVLLVLLGFYPQPILD-TSHSAIGNIQ 497 L L++L G P A+ I Sbjct: 471 PAFLAFLVILFGVIPSLPTHYIIEPAVSGIL 501 >UniRef50_C2BM70 CPA3 family monovalent cation:proton (H+) antiporter-3 subunit A n=5 Tax=Corynebacterium RepID=C2BM70_9CORY Length = 993 Score = 328 bits (842), Expect = 3e-88, Method: Composition-based stats. Identities = 114/510 (22%), Positives = 213/510 (41%), Gaps = 35/510 (6%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L L + R G +AL+ +L +L+G ++ + + Sbjct: 1 MLVLLGALIAASVVAPLLIMRMGRPAFGILALVPS-AGFVWTLVHFLRGTFTDSGAVER- 58 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIE---KYQGFFHL 118 + W+P +S L +DGL L ++ +G L ++ W + + F Sbjct: 59 ------TVEWMPSANLSFSLRLDGLGALFSLIILGMGALVLVYCWGYFDGTRRRLAMFAA 112 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 ++ + G+ A + L + FWE+ + Y L++ + ++ + AA + + T Sbjct: 113 QMVGFATAMFGLVAADNFLLMYVFWEITSILSYLLVSYY----AERASSRRAAQQALMVT 168 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 GL ML+ I+ L TG WTF+ + + ++ K + Sbjct: 169 ALGGLSMLMGIILL----GRQTGAWTFSDIAAYQHFAQTPFVTVAIVLILAGALTKSAIA 224 Query: 239 PLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 P H WLP A + APT S + ++K Y + R + ++ A+ + + + LGV Sbjct: 225 PAHFWLPGAMA-APTPVSAYLHSAAMVKAGIYLVARLAPSMYEVAT--WHVVVISLGVFT 281 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 + G WMA Q D+K ++AY +VS +GF+ GS+ A Q A+ AH L A LF+ Sbjct: 282 MLLGGWMALKQRDLKLVLAYGTVSQLGFITSIAAVGSREAMQAALALTFAHSLFKAALFM 341 Query: 358 LCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV 417 + G + TRD+ + GL K +L +++ ++ G+P FV + +L + Sbjct: 342 VVGAIDHCSGTRDITKLSGLGRKEPFLFGIAIISGLSMAGVPPLFGFVAKEAVLEATMHE 401 Query: 418 VPV-------ITVISTFGLVFASVYSLAMLHRAYFGK-----AKSQIASQELPGMSLREL 465 + + V G + Y+L L A+ K + A ++ +++ Sbjct: 402 ELLAGMPRNMMLVAYVLGSILTMAYTLRFLWGAFATKQEVNGTEPAEAVAKMHPVTMGLW 461 Query: 466 FMILLLVVLLVLLGFYPQPILDTSHSAIGN 495 LL L V+LG +P+P+ + + Sbjct: 462 LSPALLTALTVVLGVFPKPLSAAFDQHLNS 491 >UniRef50_Q9RGZ5 Na(+)/H(+) antiporter subunit A n=9 Tax=Firmicutes RepID=MRPA_BACPF Length = 805 Score = 328 bits (841), Expect = 4e-88, Method: Composition-based stats. Identities = 121/532 (22%), Positives = 216/532 (40%), Gaps = 48/532 (9%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L W + PF+ L ++ ++ L L L L + S Sbjct: 3 VLHWATISPFLLAILIPFLYKYARRIHTGW--------FVLVLPLVLFIYFIQYLSITST 54 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQ---GFFHL 118 E +PW+P GI+ + +DGLSLL +L +G L +L S + K F++ Sbjct: 55 GGVVEHTIPWVPSLGINFTVFVDGLSLLFALLITGIGTLVILYSIFYLSKKTESLNNFYV 114 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 L+ +G ++GV L+ ++ + + FWE+ + LI+ W H + A K + T Sbjct: 115 YLLMFMGAMLGVVLSDNLIVLYVFWELTSLASSLLISYWFH----REKSTYGAQKSMLIT 170 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 G ML L + + +L+ SS + M+ + K Sbjct: 171 VFGGFAMLGGFSLLYVMTGTFSIRGIIENVDLVT---SSELFLPAMILVLLGAFTKSAQF 227 Query: 239 PLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 P H WLPDA +APT S + ++K Y + R + SAE+ + GV+ Sbjct: 228 PFHIWLPDAM-EAPTPVSAYLHSATMVKAGIYLVARLTPVF--AGSAEWFWLLTGFGVVT 284 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQ--------------LAYQGAVI 343 + +G+ A Q D+K ++A+++VS +G ++ + GS A A+ Sbjct: 285 LLWGSTSAVRQKDLKGILAFSTVSQLGLIMTLLGLGSAAIYFGESVDPAFYSFAIMAAIF 344 Query: 344 QMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGN 403 +I H LF+ G + TRD+R +GGL + M +SL + G+P Sbjct: 345 HLINHATFKGSLFMTAGIIDHETGTRDIRKLGGLMAIMPVTFTVSLIGLASMAGLPPFNG 404 Query: 404 FVGEFMILFGSFQV-----------VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQI 452 F+ + M + +I V++ VF +Y L M + + GK K + Sbjct: 405 FLSKEMFFTALLRATEMNAFNMETFGIIIVVLAWIASVFTFLYCLIMFFKTFTGKFKPEN 464 Query: 453 ASQELPGMSLRELFMILLLVVLLVLLGFYPQPI-LDTSHSAIGNIQQWFVNS 503 ++ + L ++L L+++ GF+P + A+ + + Sbjct: 465 YDVKVHEAPIGMLISPVILGSLVIVFGFFPNILAYTIIEPAMQAVLPTVLAD 516 >UniRef50_A4WT79 Proton-translocating NADH-quinone oxidoreductase, chain M n=10 Tax=Alphaproteobacteria RepID=A4WT79_RHOS5 Length = 486 Score = 327 bits (840), Expect = 5e-88, Method: Composition-based stats. Identities = 204/495 (41%), Positives = 285/495 (57%), Gaps = 21/495 (4%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 M L LIL+PF GG R+G RW+A+ +GL L + + + S G Sbjct: 5 MELTALILLPFFGGIAALFAGRWGRDAERWVAIAALGLALLILISSFF--------SDGD 56 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 +W + W P G+ + LA+DGLS ++V++ LG+++V+ SWK I +Y G + L Sbjct: 57 GRWIAIERYDWAPSLGLQVILAMDGLSGALLVVSLALGIVSVIVSWK-ITEYSGLLNAAL 115 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 +W + GVFL+ D+ +F FFWE+MLVP + LI++WGH R AA KF ++ Sbjct: 116 LWTVAASNGVFLSFDLLVFAFFWELMLVPSFLLISVWGHG-----DREAAALKFLVFNAV 170 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 +GL +L A+ L TF+ E+ + GV+ LL+LGF AF VK+PV PL Sbjct: 171 AGLGLLAAVFYL----GATGDTVTFDAFEVAERQIPHGVQVLLLLGFAAAFLVKLPVPPL 226 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H WLPDAH+QAPTAGS+ LAG+LLKT AYGL RF LFP A AP + LG G Y Sbjct: 227 HAWLPDAHTQAPTAGSILLAGLLLKTGAYGLFRFPPMLFPEGFATLAPFGLALGAFGSIY 286 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 GA +A QTD KRL+AYTSV+HM VL+ I G + GA ++M+AH SA+ LF+L G Sbjct: 287 GALLACGQTDAKRLVAYTSVAHMSIVLMGICGGVYFSLMGAGVEMVAHAFSASALFLLIG 346 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 LY+R TRD+R +GGL A F A L MPGT NF+GE +++ G FQV + Sbjct: 347 ALYDRTGTRDLRELGGLQQNAPRFAAAFAVFFSAALAMPGTANFLGEALVITGMFQVNWI 406 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 I+ LV + VY+ + R FGK++ ++ L ++LRE+ I+LL V +L G Sbjct: 407 FASITLISLVISVVYATRLFKRVVFGKSRR---TEALEDLTLREMGPIVLLAVATLLFGM 463 Query: 481 YPQPILDTSHSAIGN 495 PQ ++ A+ Sbjct: 464 LPQLLMGALEGAVEA 478 >UniRef50_Q49W91 Na(+)/H(+) antiporter subunit A1 n=19 Tax=Bacillales RepID=MNHA1_STAS1 Length = 805 Score = 327 bits (839), Expect = 7e-88, Method: Composition-based stats. Identities = 117/526 (22%), Positives = 219/526 (41%), Gaps = 46/526 (8%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL +L+P I + RF ++ L + + L + S + Sbjct: 3 LLHIAVLLPLIFALIIPFVYRFYKRIHLGW--------FVLPIPVVLFIYFLSYISTTMS 54 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQ--GFFHLN 119 W+P FG++ +L +DGL LL +L +G L VL S + + + G F+ Sbjct: 55 GNTIMEKANWMPHFGMNFNLYVDGLGLLFSLLITGIGCLIVLYSISYLSRQEQLGHFYCY 114 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 L+ +G ++G+ L+ ++ + + FWE+ + LI+ W D + I A K + T Sbjct: 115 LLLFMGAMLGLVLSDNLIILYLFWELTSFSSFLLISFW----RDKQASIYGAQKSMLVTV 170 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 GL +L I+ L + N + +S M+ I K P Sbjct: 171 FGGLSLLGGIILLSIAGGTTSIQELINN---ASEIQTSPFFIFSMILVLIGAMTKSAQFP 227 Query: 240 LHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 + WLPDA +APT S + ++K Y + R + S + +G+I + Sbjct: 228 FYVWLPDAM-EAPTPVSAYLHSATMVKAGLYLVARMTPIF--AVSQGWIWTVTAVGLITL 284 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGS-------------QLAYQGAVIQM 345 F+ + A Q D+K ++A+++VS +G ++ + G+ A+ A+ + Sbjct: 285 FWASLNATKQQDLKGILAFSTVSQLGMIMAMLGVGAVSFHFEGAESQIYIAAFTAAIFHL 344 Query: 346 IAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFV 405 I H LF++ G + TRD++ +GGL + M ++L +++ G+P F+ Sbjct: 345 INHATFKGALFMITGAVDHSTGTRDVKKLGGLLTIMPISFTITLITSLSMAGIPPFNGFL 404 Query: 406 GEFMILFGSFQV-----------VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIAS 454 + L +V +I + + G VF VYS+ + + + G K Sbjct: 405 SKEKFLESMIEVTNVNLFSLDTLGILIPITAIIGSVFTFVYSIRFIGQIFLGSYKEDKLP 464 Query: 455 QELPGMSLRELFMILLLVVLLVLLGFYPQPIL-DTSHSAIGNIQQW 499 ++ +S L +L +L+++ G +P + A+ I Q Sbjct: 465 KKAHEVSPLMLISPSILAILVIVFGLFPAILSGSIIEPAVNAIGQT 510 >UniRef50_A8ERK4 NADH-quinone oxidoreductase, M subunit n=1 Tax=Arcobacter butzleri RM4018 RepID=A8ERK4_ARCB4 Length = 495 Score = 327 bits (839), Expect = 8e-88, Method: Composition-based stats. Identities = 146/500 (29%), Positives = 261/500 (52%), Gaps = 17/500 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L ++I +P + F T R V R IA +T + L L L+++++ + T Sbjct: 5 ILSFIIFLPAVVAFGLMITTR-DVNAIRNIAFLTTTVILGLVLKIYIEFDPNST------ 57 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q ++ WI +GI+ ++ +DG SL ++++ +L + L W E + +N++ Sbjct: 58 -MQFVTNVSWIETYGINYYVGLDGFSLTILMMIAILIPTSYLLLW---EGKTKGYWINML 113 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + GV G L++D+ LF+FFWE+ML+P++ LI +G ++ K +YT A Sbjct: 114 LVQTGVTGSLLSLDVVLFYFFWEVMLLPVFLLIGQYGFG-----NKVFTTIKVTVYTMAG 168 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLN-TPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 L+MLIAIL L +Y+ G W+F Y++L+ + + + L L F AFA+K+P+ PL Sbjct: 169 SLLMLIAILYLGVAYYSEFGTWSFAYDKLMTISTLDYSTKAWLFLAFLAAFAIKIPIFPL 228 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H W+ + + APT L+ I+ K Y ++RF +P+FP+ EF+ + +G+ G+ Y Sbjct: 229 HTWIMETYKNAPTGAVFLLSSIMAKLGVYAIVRFMIPIFPDIYVEFSTWFVAIGLFGLIY 288 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 A Q DIKR+ AY+S SH+ F+ I++ + GA+ +IAH ++ LF+L G Sbjct: 289 FGIAALMQDDIKRMFAYSSASHLSFISAGIFSLNAYGINGALYLIIAHAIATGALFLLVG 348 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 + E+ + ++ +GG+ K + A +G+PGT FV E +I+FG ++ Sbjct: 349 LMQEQTGFKTIKDLGGIAKKAPIFTFIFAVMLFANVGLPGTNGFVSELLIIFGIYEFNAY 408 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 + IS ++ + Y L M RA + + ++E+ + V+L+ ++GF Sbjct: 409 LGYISALTVIIGASYMLWMFQRAILQDRPEGAPELTMRDLKIKEIIGLAPWVILVFVMGF 468 Query: 481 YPQPILDTSHSAIGNIQQWF 500 YP+ +D + + Q Sbjct: 469 YPEIFMDKFEPTVTHYLQDI 488 >UniRef50_C1A8Y2 NADH-quinone oxidoreductase chain M n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8Y2_GEMAT Length = 521 Score = 327 bits (838), Expect = 9e-88, Method: Composition-based stats. Identities = 177/519 (34%), Positives = 281/519 (54%), Gaps = 24/519 (4%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVK------VPRWIALITMGLTLALSLQLWLQGGYSLT 55 +LP ++L P + L R + P + AL+++ L Sbjct: 11 VLPAMLLWPVLAAVLVRIGGRDVSRDDAGNEAPSGGPDARVLTLAALAVEALLAVAVWGV 70 Query: 56 QSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF 115 WQ+ D+PW+ G ++ L +DGLSL MVVLT + LA+L SW + Sbjct: 71 FDVDGRGWQARVDIPWLADLGATLSLGVDGLSLPMVVLTAFVVPLALLGSWNNVRVRTPA 130 Query: 116 FHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFF 175 F L+ + G++GVF+ +D+ F+ WE+ML+P Y L+ +WG + A+ ++ Sbjct: 131 FGALLLLLTSGLVGVFITLDLLAFYLAWELMLIPTYLLVGVWGAAGTSR-----ASLRYV 185 Query: 176 IYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKM 235 ++T L+ML+AI+AL +NA G + + + LL +S + + L FF AFAVK Sbjct: 186 LFTLVGSLLMLVAIIAL----WNAGGGTSLHIDHLLQVALSPRAQLWMFLAFFAAFAVKS 241 Query: 236 PVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFA--PIAMWL 293 +VP H WLPDA S APT +V L LK AY +LRF++PLFP A+ ++ + L Sbjct: 242 ALVPFHTWLPDAQSAAPTVAAVTLG---LKVGAYAILRFAIPLFPAAAMDYTVRSTILVL 298 Query: 294 GVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAA 353 VI + YGA +A AQ D KR+I+Y+SVSH+G +++ + + + QGAV+ +++ G++ Sbjct: 299 SVIAVVYGALVAMAQRDFKRVISYSSVSHLGLIMLGSFVLTPQSVQGAVMSIVSSGIATT 358 Query: 354 GLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFG 413 LF+L G L +R T GGL + W + ++T+ +PGT FVGEF++L G Sbjct: 359 ALFLLAGMLEDRRATTAFSAFGGLAKVLPWFSVALIVSMLSTVALPGTIGFVGEFLVLIG 418 Query: 414 SFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVV 473 ++ PV+ VI+T G++FA+VY L + + F K ++ A+ LP +S RE F+++ LV Sbjct: 419 TYAEFPVLAVIATSGVIFAAVYGLRAVQQLLFEKVDTE-ANGALPDLSGRERFVMVTLVA 477 Query: 474 LLVLLGFYPQPILDTSHSAIGNIQQWF---VNSVTTTRP 509 +V LG P IL + A + + N+ TT P Sbjct: 478 AMVYLGVAPHAILQRADRASQALIESVRFGPNAPTTLPP 516 >UniRef50_B3QY40 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QY40_CHLT3 Length = 772 Score = 327 bits (838), Expect = 9e-88, Method: Composition-based stats. Identities = 115/505 (22%), Positives = 208/505 (41%), Gaps = 43/505 (8%) Query: 5 WLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQ 64 +L+P + + ++ + +G++LALSL ++ + W Sbjct: 11 ITLLLPLLSFTFLIFFNGKLPRKGDFVGVGLVGISLALSLYIFTSVVFGEYDPNFKVGWS 70 Query: 65 SEF----DMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI--EKYQGFFHL 118 + ++P + IS+ + ID L+ +M+V+ L+ L + S + +KY G ++ Sbjct: 71 FTWLDFGNVPGVGPLTISMGILIDNLTAIMLVVVTLISFLVHIFSMGYMAGDKYYGRYYA 130 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 L ++G+ L+ ++F + FWE++ + Y LI + K S A K F+ Sbjct: 131 YLGIFTFSMLGIVLSDNLFSIYIFWELVGLSSYLLIGFFFEKDSAAD----AQKKAFLTN 186 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 + + M + IL L + + + N +S L F+ K Sbjct: 187 RVGDIGMWLGILILYSQFHTFGYEEIYQNIQDGNFTLSEAWLTAGGLLLFMGCVGKSAQF 246 Query: 239 PLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 PLH WLPDA + PT S A ++ Y + R +FP S + + ++G Sbjct: 247 PLHIWLPDAM-EGPTPVSALIHAATMVAAGVYFVAR----IFPILSVDALHVIAFIGAFT 301 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 F A +A Q DIKR++AY+++S +G++++ + G AY A ++ H A LF+ Sbjct: 302 AFMAATIAITQHDIKRVLAYSTLSQLGYMVMGMGIG---AYAPAFFHLVTHAFFKACLFL 358 Query: 358 LCGQLYERI-HTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSF- 415 G + H +DMR MGGL M W A +A G+P T F+ + IL GS Sbjct: 359 GSGAVIHATHHEQDMRWMGGLRKNMPWTFATFTIAMLALSGLPMTSGFMSKDAILAGSLG 418 Query: 416 ------QVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQ-------------- 455 +I V + + Y + +FG+ ++ + Sbjct: 419 FANVEGGFYYLIPVFGFGAAMLTAFYMGRQMWLVFFGENRAHLKPASHDDHHHGHDDHHG 478 Query: 456 --ELPGMSLRELFMILLLVVLLVLL 478 + + F +++L L V Sbjct: 479 HHSVHDVDWVMRFPLVVLATLSVFF 503 >UniRef50_C0WGQ4 CPA3 family monovalent cation:proton (H+) antiporter-3 subunit A n=2 Tax=Corynebacterium RepID=C0WGQ4_9CORY Length = 1002 Score = 327 bits (838), Expect = 9e-88, Method: Composition-based stats. Identities = 107/502 (21%), Positives = 204/502 (40%), Gaps = 30/502 (5%) Query: 11 FIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMP 70 +G + + + GL + ++ + + + Sbjct: 4 LLGALIVATV--VAPLLIMNVGRPAFGLLAIVPGVGFVWTLAHFARGTFRDGGTLNYTIE 61 Query: 71 WIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIE---KYQGFFHLNLMWILGGV 127 W+P +++ L +D L L ++ +G L +L W + + F ++ + Sbjct: 62 WMPAAHLAVDLRMDALGGLFSLIILGMGALVLLYCWGYFDSTRRRLAMFAGQMVGFATAM 121 Query: 128 IGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLI 187 G+ + + L + FWE+ + Y L++ + ++ + AA + + T GL ML+ Sbjct: 122 FGLVTSDSLLLMYVFWEITSLLSYLLVSYY----AERASSRRAAQQALMVTVLGGLSMLM 177 Query: 188 AILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDA 247 I L TG WTF+ + + + ++ + K +VP H WLP A Sbjct: 178 GICLL----GRQTGAWTFSEIHAYDHFPQTPYVTVAIVLILVGALTKSAIVPAHFWLPGA 233 Query: 248 HSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAF 306 + APT S + ++K Y + R + ++ A+ + + + LGV + G WMA Sbjct: 234 MA-APTPVSAYLHSAAMVKAGIYLVARLAPDMYEVAT--WHLVVISLGVFTMLLGGWMAL 290 Query: 307 AQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERI 366 Q D+K ++AY +VS +GF+ + GS+ A Q + AH L A LF++ G + Sbjct: 291 KQKDLKLILAYGTVSQLGFITSIVAVGSREAMQAGLALTFAHSLFKAALFMVVGAIDHCS 350 Query: 367 HTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVIT---- 422 TRD+ + GL + +L +L+L A++ G+P FV + +L + +I Sbjct: 351 GTRDITKLSGLGRRQPFLYSLALISALSMAGVPPLFGFVSKEAVLESTMHEGLLIGMPRN 410 Query: 423 ---VISTFGLVFASVYSLAMLHRAY------FGKAKSQIASQELPGMSLRELFMILLLVV 473 V G + Y+L L A+ K A + +++ +L Sbjct: 411 MILVAYVAGSILTMAYALRFLWGAFASKNLPHDKDGVSAAVATMHKVNVGLWLAPAVLTA 470 Query: 474 LLVLLGFYPQPILDTSHSAIGN 495 L + LG PQ + + + Sbjct: 471 LTIALGLAPQALSAAIDQHLDS 492 >UniRef50_D1BW17 Proton-translocating NADH-quinone oxidoreductase, chain M n=3 Tax=Actinomycetales RepID=D1BW17_XYLCX Length = 527 Score = 326 bits (837), Expect = 1e-87, Method: Composition-based stats. Identities = 165/508 (32%), Positives = 249/508 (49%), Gaps = 19/508 (3%) Query: 3 LPWLILIPFIGGFLCWQTER---FGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAG 59 L LI P + T R G R +AL+ + LAL + +L +A Sbjct: 6 LTALIAWPLVAALATATTGRGRTLGAGRARQVALVGSLVELALGVGAFLAFD-----TAR 60 Query: 60 IPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF---F 116 + Q WIP G S + +DG++LL+V L+ L L +L +WKE + Sbjct: 61 AAEHQLLETHRWIPSIGASYAVGVDGVALLLVGLSVGLVPLVILAAWKEQGGDLARLRTY 120 Query: 117 HLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFI 176 ++ + ++ VF A D+FLF+ +E ML+P+YFLI +G G R AA KF + Sbjct: 121 LATVLVLQSFMVAVFAARDVFLFYVLFEAMLIPVYFLIGGFG----QGAQRRYAAVKFLL 176 Query: 177 YTQASGLVMLIAILALVF-VHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKM 235 Y+ A GLVML+A++AL V G TF + L + + L+ GFF+AFA+K Sbjct: 177 YSLAGGLVMLVAVIALYLQVPAAERGPQTFLVDNLSGLELGTTAGRLMFCGFFLAFAIKA 236 Query: 236 PVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGV 295 P+VP+H WLPD A S L +L K +G+L LPLFP A+ AP + L V Sbjct: 237 PLVPVHSWLPDVAENATPGTSTLLISVLDKVGTFGMLTLCLPLFPEAARWAAPAVVVLAV 296 Query: 296 IGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGL 355 + I YGA +A QTD+ RLI YTSVSH GF+++ I+T + GA M+ HG+S L Sbjct: 297 VSILYGAILAIGQTDLLRLIGYTSVSHFGFIVLGIFTFTATGTAGASFMMLNHGISTGAL 356 Query: 356 FILCGQLYERIHTRD--MRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFG 413 F++ G + R R + GGL L L ++ +PG F E ++ G Sbjct: 357 FLVAGFVIARHPERSQRIADYGGLRIAAPILGGSFLVAGLSAAALPGLATFGSEILVFLG 416 Query: 414 SFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQ-ELPGMSLRELFMILLLV 472 +F V +++ +V A++Y L R + G + ++ +P + RE + +L+ Sbjct: 417 AFSAVQWAGIVAVPAVVLAAIYVLLTYQRIFTGTVPAGLSPDGRVPDLDGRERTVAGVLI 476 Query: 473 VLLVLLGFYPQPILDTSHSAIGNIQQWF 500 LL+LLGF P L + + Sbjct: 477 ALLLLLGFVPNLGLQYVDAPATTTIEQV 504 >UniRef50_UPI0001C3127E proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3127E Length = 512 Score = 324 bits (831), Expect = 5e-87, Method: Composition-based stats. Identities = 158/506 (31%), Positives = 253/506 (50%), Gaps = 16/506 (3%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 M L LI +P + L K+ ++++ TL +++ ++ G Sbjct: 1 MTLSILIWLPLVVAVLGGIVG---GKLAPKLSILGALATLGIAISFVVRF------KTGQ 51 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 Q D WI GI+ L +DGL++L+++L L +A + + + G F Sbjct: 52 DGLQFVTDEAWISELGITYKLGVDGLNVLLLLLATFLFAIAAIFASLREWERPGLFFFWF 111 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 V+G F+A D+ LF F+++ML+P YFL +WG + R+ K IYT Sbjct: 112 GVAETAVLGAFVAQDLILFVAFFDLMLIPFYFLTGIWGSGDHET--RVRGTQKLVIYTLV 169 Query: 181 SGLVMLIAILALVFVHYNATGV-WTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 L+ML+A +A + TF+ L P+S G + + L F AF VKMP P Sbjct: 170 GSLLMLVAAIATGVLASQQHDTELTFSISALQQLPLSDGSQDWIFLCFAAAFLVKMPAFP 229 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 LHGWLPD + P +G+L K AAYG LR LP+FP+AS F + + + + I Sbjct: 230 LHGWLPDGYKAMPLPALAVFSGVLSKVAAYGFLRIVLPVFPDASVHFQELLLLIALASIL 289 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 YG+ MAF+ +++ ++AY+SV+ MGF+ + I+ ++ QGA++QM+ HGL A LF + Sbjct: 290 YGSVMAFSAQNVRLVVAYSSVAQMGFITLGIFALNEDGAQGALLQMVNHGLVTAPLFFIV 349 Query: 360 GQLYERI-HTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVV 418 L R + +M+ MGG+ + L L L ++ATL MPG+ NFVGEF+IL G F+ Sbjct: 350 ALLAARAGGSEEMKDMGGIAFRAPVLATLFLIVSLATLAMPGSANFVGEFLILLGVFEAK 409 Query: 419 PVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLL 478 P ++ G+ A+VY L +A + S+ ++ R+L +++ V++++ L Sbjct: 410 PAFAFFASIGVALAAVYMLRAFIKAMHNRVNPSTDSR---EVTFRDLAVLVPSVIVIIAL 466 Query: 479 GFYPQPILDTSHSAIGNIQQWFVNSV 504 YPQ L S Sbjct: 467 ALYPQFGLKRSERGTQESVAQVQEKT 492 >UniRef50_C7P4L7 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Halomicrobium mukohataei DSM 12286 RepID=C7P4L7_HALMD Length = 522 Score = 324 bits (831), Expect = 5e-87, Method: Composition-based stats. Identities = 162/519 (31%), Positives = 253/519 (48%), Gaps = 30/519 (5%) Query: 3 LPWLILIPFIGGFLCWQTE-RFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 + L+ + +G + + R+ K ++ I + ++ + + Sbjct: 4 VAALLAVTLLGAIATFLVDDRYAAKFATAVSTIPLVGSVWMYYVYLTEYQGVGNALLSPD 63 Query: 62 QWQSEFDMPWIPRFG--ISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLN 119 + WI G I + +DG+S+ ++ LTG+L LA++ SW I++ Q F+ Sbjct: 64 TVAFRQTIDWIELGGYTIQYSVGLDGVSMPLLALTGILTTLALVSSWTPIDERQSQFYGL 123 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 ++ + +IGVF A+D F +F FWE +L+PMY LI +WG G R AA KFF+YT Sbjct: 124 MLLMEVSLIGVFSALDFFFWFVFWEGVLIPMYLLIGVWG-----GPRRKYAAIKFFVYTN 178 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSG---------VEYLLMLGFFIA 230 + LVM + ALVF ++ G ++ L + F+ Sbjct: 179 VASLVMFVGFFALVFSLGDSIATLGLPEITQALVAGEMGSLAGIAVADLKLLAFVLMFVG 238 Query: 231 FAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNAS-----AE 285 FAVK+PV PLH WLPDAH +APT SV LAG+LLK Y LLRF+ + + + A Sbjct: 239 FAVKVPVFPLHTWLPDAHVEAPTPVSVMLAGVLLKMGTYALLRFNFTMLSDVATGSVLAI 298 Query: 286 FAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQM 345 +GV + YGA +A AQ D+KR++AY+S+S MG+V++ + + GA QM Sbjct: 299 MPVAIAVIGVFSVIYGALLALAQRDLKRIVAYSSISSMGYVILGLVAFTPHGMGGATFQM 358 Query: 346 IAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFV 405 I+HGL + +F+ G +Y HTR + M GL +M W + + A +G+P F Sbjct: 359 ISHGLISGLMFMAVGVIYNETHTRMVGDMSGLADRMPWTVGIFVSAAFGYMGLPLMSGFA 418 Query: 406 GEFMILFGSFQV-------VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELP 458 E I GSF PV+T I+ FG+V + Y L + R FG EL Sbjct: 419 AEVFIFLGSFGATDTLGTLAPVLTSIAMFGIVIVAGYLLWAMQRTLFGGY-ELETDYELD 477 Query: 459 GMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQ 497 G + ++ + +L++L++LLG P A+ I Sbjct: 478 GAAFHDVAPLAVLLLLVILLGVAPDLSYGMIQEAVNPIL 516 >UniRef50_B2A694 NADH dehydrogenase (Quinone) n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A694_NATTJ Length = 748 Score = 324 bits (831), Expect = 6e-87, Method: Composition-based stats. Identities = 118/510 (23%), Positives = 214/510 (41%), Gaps = 50/510 (9%) Query: 5 WLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQ 64 +I +P +G F K+ +I + L L ++ + Q Sbjct: 18 LIIFVPLLGSFGVILISSVSEKLRDIYTVIISAVPLVLLAVMYPLVQQGIVQ-------- 69 Query: 65 SEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI--EKYQGFFHLNLMW 122 +++ W I + +D L L L L+ LA L + + I E + F+ ++ Sbjct: 70 --YNIEWF--LEIGLIFRLDSLGFLFTALISLIWFLATLYATEYISHEHNRNRFYFFWLF 125 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 G +GVF+ D+F F F+EMM + Y L+ + K + A F G Sbjct: 126 TFGATLGVFVTGDLFGLFVFFEMMSLTSYVLVI-----HEEDKDAMRAGNLFLFLGIGGG 180 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 L +L + + F + +L+L F I F +K +VPLH Sbjct: 181 LAILFGLFIMYFNLETLEIAPMLGDMVAAGVNIP-----VLLLLFIIGFGIKAGIVPLHI 235 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASA-----------EFAPIAM 291 WLP AH APT S L+G+L+KT YGL R L + AS+ + Sbjct: 236 WLPKAHPVAPTPASAILSGLLIKTGVYGLWRVFLMVMGPASSQEVELYQQYITNWGMGLF 295 Query: 292 WLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTG------SQLAYQGAVIQM 345 W+G+I + GA MA QT K+++AY+SVS +GF+++ + + + G ++ + Sbjct: 296 WIGIITMVLGALMALLQTSAKKMLAYSSVSQVGFIIMGLGAAVYLGTDGPIGFAGGIMHV 355 Query: 346 IAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFV 405 I H L A LF++ G ++ R H D+ + G++ +M ++ + A+ G+P + Sbjct: 356 INHALFKACLFLIVGAIFIRTHLLDIDRVRGMFKQMPFMGIAFIIAALGIAGVPLFNGYA 415 Query: 406 GEFMILFGSFQVVPVITV--------ISTFGLVFASVYSLAMLHRAYFGKAKSQIASQEL 457 + ++ +V + I F Y + + + GK + + Sbjct: 416 SKTILHHALSEVSYLTPGTAMFIADKIFVFTSALTVSYFIKLFRGLFLGKLPQEWQNTNF 475 Query: 458 PGMSLRELFMILLLVVLLVLLGFYPQPILD 487 + ++ + + VVL++ +G +P +L+ Sbjct: 476 SVAPIIKVVVSVF-VVLIIAIGVFPNFVLE 504 >UniRef50_B8G566 Proton-translocating NADH-quinone oxidoreductase, chain M n=6 Tax=Chloroflexus RepID=B8G566_CHLAD Length = 533 Score = 324 bits (831), Expect = 6e-87, Method: Composition-based stats. Identities = 170/517 (32%), Positives = 265/517 (51%), Gaps = 25/517 (4%) Query: 10 PFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI----PQWQS 65 P IG + + RW A+ TL ++ + A P Q Sbjct: 16 PTIGALILLVLPNGRPMLYRWTAMSIALATLLVAGTVIGLFYTGPYGPAAGTVIGPPLQF 75 Query: 66 EFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILG 125 + W+ G S + +DG++L +V LT L A+ +W+ + L++ Sbjct: 76 VDTVVWLTAIGASYFIGVDGINLWLVGLTAFLTPFAIAATWQRQTRSLRLLLALLLFAET 135 Query: 126 GVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVM 185 +GVFLA DM LF+ F+E+ L+PM FLI +WGH R+TA K F+YT L+M Sbjct: 136 AFLGVFLAQDMLLFYVFYELALIPMIFLIGMWGHHG-----RVTATLKLFLYTFGGSLLM 190 Query: 186 LIAILALVFVHYNA------TGVWTFNYEELLN------TPMSSGVEYLLMLGFFIAFAV 233 L AI+ L +H NA TF +++ + + LL FF+AFA+ Sbjct: 191 LFAIIGLHILHRNAIATINPGFTGTFALNQIVADLRSGLFSLDPLMAQLLFGAFFLAFAI 250 Query: 234 KMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWL 293 K+ + PLH WLPDA+S APT ++ LAG++ K AYG +RF+L LFP ++ AP L Sbjct: 251 KLALWPLHSWLPDAYSVAPTPAAIILAGLMAKFGAYGFIRFNLTLFPEVASWAAPAIAVL 310 Query: 294 GVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAA 353 VIGI YGA +AF Q D++R+IAY S+SHM F+ + I T + + GA++QM+AHG+ A Sbjct: 311 AVIGIIYGALIAFTQRDMQRMIAYASMSHMNFIALGIVTLTAIGINGALLQMVAHGVIMA 370 Query: 354 GLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFG 413 L ++ + ER +R++ GGLW L+L +A G+PG FVGEF +L G Sbjct: 371 ALLLIITVIEERRDSRELTSFGGLWRVTPVYAGLTLLTLLAMAGLPGLSGFVGEFTMLQG 430 Query: 414 SFQV---VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILL 470 F + + G++ A+VY+L + + G+ ++ A+ +LP + REL + Sbjct: 431 VFTSPLLGWPFALGAVIGIILAAVYALNLFRMGFMGEVRNT-ANLDLPDLQRRELMTLGA 489 Query: 471 LVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNSVTTT 507 L V++V LG +P +L + ++ + +V Sbjct: 490 LAVVIVALGLFPNVLLSGMNGSVQGLVDALTPAVQAA 526 >UniRef50_B9XHI6 Proton-translocating NADH-quinone oxidoreductase, chain L n=2 Tax=Verrucomicrobia RepID=B9XHI6_9BACT Length = 636 Score = 323 bits (829), Expect = 9e-87, Method: Composition-based stats. Identities = 105/484 (21%), Positives = 194/484 (40%), Gaps = 21/484 (4%) Query: 4 PWLILIPFIGGFLCWQTE--RFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 ++ +P + L + +V I++ + + L+ L+ S Q Sbjct: 11 WLILFLPLVSVALISLIPGIKSRPRVSAQISIAAVVVCFLLTSILYFVLQNSGQQ----Q 66 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQG--FFHLN 119 Q + I I L +D LS++M+++ +G L + SW+ ++ G + Sbjct: 67 FPQITATWLQVDYLRIDIGLKLDALSMMMMLIVTGVGGLIHIFSWEYMKGDPGYSRYFAC 126 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 L + ++G+ +A + + F FWE++ + Y LI W + S A K F+ + Sbjct: 127 LSLFIFSMLGIVMADNFLMMFIFWELVGISSYLLIGFWYERPSAAD----ACKKAFLTNR 182 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 L+ IL + + +T +GV L F A K P Sbjct: 183 LGDFGFLVGILLVWATLGHRLNFDALKQYLDKHTLEFAGVATAAGLLVFCGAAGKSAQFP 242 Query: 240 LHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 LH WLPDA + PT S A ++ Y L R L + S + W+G I Sbjct: 243 LHVWLPDAM-EGPTPVSALIHAATMVAAGVYMLCRIYFLLDVSGSHAL-EVIAWIGGITA 300 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFIL 358 A +A Q DIKR++AY+++S +G++++A+ T A+ + H A LF+ Sbjct: 301 LLAAVIAIQQNDIKRILAYSTLSQLGYMVMAVGTHGP---TPAMFHLTTHAFFKALLFLG 357 Query: 359 CGQLYER-IHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV 417 G + H +++ MG L KM +A G P F + IL + + Sbjct: 358 AGAVIHAVHHEQNIWKMGALRKKMPTTFVTFTIGTLALAGCPPLSGFYSKDGILGQAMET 417 Query: 418 VPV-ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLV 476 + ++ + + Y ++ A++G +S+ A+ + +++L V Sbjct: 418 HHYGLFILGLLAAILTTFYMFRLVFVAFYGAPRSE-AADHAHEAPGMLKWPLIILAVFSF 476 Query: 477 LLGF 480 + G Sbjct: 477 IGGV 480 >UniRef50_C9RKX5 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKX5_FIBSS Length = 504 Score = 323 bits (828), Expect = 1e-86, Method: Composition-based stats. Identities = 143/510 (28%), Positives = 238/510 (46%), Gaps = 20/510 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWI----ALITMGLTLALSLQLWLQGGYSLTQS 57 L + ++P + C K R I A I + + L+ ++ G + Sbjct: 5 LFNSIWVLPLLTVLACVLIPATYEKTLRTIHVTSATIVLAIVCYLTYAIYALSGTPTDPA 64 Query: 58 AGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFH 117 A + D+PW+ F + DGL++L++ LT + VL S K I+ Q F Sbjct: 65 AAPLALRFFTDIPWLSMFNAHYIVGADGLNMLLLALTAFIVWAGVLVSLK-IKGNQKIFF 123 Query: 118 LNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIY 177 + + V GV+++ D+ LFF F+EM + MY +IA +G R K + Sbjct: 124 ALIQLLATSVYGVYMSFDLVLFFVFYEMEALCMYLMIACYGSG-----KRDYGGKKLTLT 178 Query: 178 TQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPV 237 ++L + L F +G ++N E+ T + + F+ FAV + Sbjct: 179 LAFGSSMILATLFGLYF----ESGATSWNLIEIAKTTLPMDFQMWAFPLMFMGFAVSSSL 234 Query: 238 VPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 P H W PD HS APTA S+ AG+++K AYG LR ++ L P A+ + P + L + Sbjct: 235 FPFHFWSPDGHSAAPTAVSMLAAGVMMKMGAYGCLRVAMFLMPEAAKIWLPYVVALLIFN 294 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 + G ++A D+K + AY+S+SH+G + + + + + +GA +QMI+HG F Sbjct: 295 VVLGPFIAIRHKDLKYITAYSSISHLGLIFLGLAALTPIGLRGASLQMISHGFLTGLFFA 354 Query: 358 LCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV 417 G +YER HTRD+ MGG+ KM +L + A LG+PG F+ E I G+FQ Sbjct: 355 TIGMIYERTHTRDITEMGGIMRKMPFLGVGFVLAGFAGLGLPGFSGFIAESTIFIGAFQQ 414 Query: 418 VP----VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVV 473 ++T+++ + +VY L +R G + S L RE +I++LV Sbjct: 415 DSTLTRIVTILAILSITTTAVYILQTANRMLHGPLPQKYES--LTDGCFREKLVIVVLVA 472 Query: 474 LLVLLGFYPQPILDTSHSAIGNIQQWFVNS 503 L+ +G P I + +I I + ++ Sbjct: 473 CLLFIGVCPGWISELLDQSIAPIFEKISSA 502 >UniRef50_C7NIQ7 NADH:ubiquinone oxidoreductase subunit 5 (Chain L)/multisubunit Na+/H+ antiporter, MnhA subunit n=2 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NIQ7_KYTSD Length = 1003 Score = 323 bits (828), Expect = 1e-86, Method: Composition-based stats. Identities = 114/505 (22%), Positives = 201/505 (39%), Gaps = 32/505 (6%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLT------ 55 +L ++ G K +AL ++ + L + S Sbjct: 1 MLALILAHLVAALCAPMLVRALGSKAFLPLALPSLASVVYLVAKAPAVHAGSTDHPHHEV 60 Query: 56 -QSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQ- 113 Q AG W+ + G+++ +D LS ++ ++ +G L ++ E + Sbjct: 61 GQGAGGLPPAVTESWTWVHQLGMNLDFRLDSLSWVLAMVVVFIGTLVLIYCVGYFEDDEP 120 Query: 114 --GFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAA 171 G F +L G ++G+ +M + + FWE+ V + LI + +AA Sbjct: 121 GLGLFAGSLTAFAGAMLGLVTTDNMLVLYVFWEITSVLSFLLIG----HRITSRHSRSAA 176 Query: 172 TKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAF 231 + I T + GL ML+ I+ L + + + + P + + ++ + Sbjct: 177 MEALIITASGGLAMLVGIVGLGQATGSYSIS-----ALMAHPPEAGPLVTASVVLLLVGA 231 Query: 232 AVKMPVVPLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIA 290 K +VP H WLP A + APT S A ++K Y + RF+ + Sbjct: 232 ITKSAMVPFHFWLPGAMA-APTPVSAYLHAAAMVKAGIYLIARFAPAF--ADLDVWKWTV 288 Query: 291 MWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGL 350 + LG + GAW + Q DIK ++AY +VS +GF+++ + G+Q A + ++AH L Sbjct: 289 LLLGGPTMLLGAWRSLRQVDIKLVLAYGTVSQLGFLVLVVGHGTQDAALAGLTLLVAHAL 348 Query: 351 SAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMI 410 LF++ G + TRD+R + GL M L A + A + G+P FV + Sbjct: 349 FKGSLFLVVGAIDHCTGTRDLRRLSGLARSMPVLFATACVSAASMAGVPPLLGFVSKEGA 408 Query: 411 LF-------GSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLR 463 G F V V V G + YS L A+ + + E+ Sbjct: 409 YTVFNPVEHGWFTVEGVTFVFILVGSMMTFAYSARFLWGAFRTQRTKPLT--EVHDPGFF 466 Query: 464 ELFMILLLVVLLVLLGFYPQPILDT 488 F LL V ++LG + +L+ Sbjct: 467 LQFSPALLAVCTIVLGLTSKTVLEP 491 >UniRef50_Q1AZS5 Proton-translocating NADH-quinone oxidoreductase, chain M n=3 Tax=Bacteria RepID=Q1AZS5_RUBXD Length = 487 Score = 322 bits (826), Expect = 2e-86, Method: Composition-based stats. Identities = 160/486 (32%), Positives = 254/486 (52%), Gaps = 27/486 (5%) Query: 20 TERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISI 79 + + + GL L + +W +G A + ++ WIP G++ Sbjct: 22 WRGAPPRAAHALGIAFSGLALLGAAWMWARG-------ASGEGFSQVEEVAWIPSLGVAY 74 Query: 80 HLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLF 139 + +DG+SL +V++T +L ++++ S I + + + + +GVF+A+D LF Sbjct: 75 RVGVDGISLPLVLMTAVLFFVSLVFSAG-IRERARSYVALFLLLETASLGVFVALDAVLF 133 Query: 140 FFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNA 199 + F+E+ LV MYF+I+ WG+ + R AA FF+YT + + +L + Y Sbjct: 134 YVFFEVTLVGMYFIISGWGY-----EDRQRAALMFFLYTL----LGSLPLLLAILGLYLG 184 Query: 200 TGVWTFNYEEL-LNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVD 258 + TF+ EL N P++ L +L + F VK PV PLH WLP AH +APTAGSV Sbjct: 185 SEPNTFDMRELIANPPLTGLAATLALLAMLVTFFVKTPVFPLHTWLPAAHVEAPTAGSVI 244 Query: 259 LAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYT 318 LAG+LLK YGL+RF+L + P+A + AP L YGA++A Q+D+KRL+AYT Sbjct: 245 LAGVLLKLGTYGLVRFALQMTPDAFRDLAPYVAALAAFSALYGAFVALGQSDLKRLVAYT 304 Query: 319 SVSHMGF------VLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMR 372 SV+HMG+ V A +A GAV+QM++HG+ LF+L G L +R HTR+M Sbjct: 305 SVNHMGYVVLGVAVAAAATGARAVALDGAVLQMVSHGVVTGALFLLVGMLQDRAHTREMG 364 Query: 373 MMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFA 432 GGL + L + A A+LG+PG +F EF I G+ +V P V++ G+ Sbjct: 365 AFGGLLGVVPGLGWAFVLAAFASLGLPGLAHFPAEFQIFLGTLRVYP-PAVVAVLGIAVT 423 Query: 433 SVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSA 492 + L + A+ G+ + + ++L + RE ++ L+ L VL+G P L H+ Sbjct: 424 AGLYLRAIQVAFLGEPRGE--RRKLRDLGARETLAVVPLLALTVLIGVVPSLALGVIHAT 481 Query: 493 IGNIQQ 498 + Sbjct: 482 TEALLP 487 >UniRef50_B0R3V0 NADH dehydrogenase-like complex subunit M n=9 Tax=Halobacteriaceae RepID=B0R3V0_HALS3 Length = 519 Score = 321 bits (824), Expect = 4e-86, Method: Composition-based stats. Identities = 161/508 (31%), Positives = 258/508 (50%), Gaps = 22/508 (4%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 M++ L+ + + + ++ +A L + S+ +++Q S Sbjct: 1 MMIEALLGVTLLSALVVMLAP---DRIAGKLAAGLSLLPVVGSVWMFVQFDGSGNALLEG 57 Query: 61 PQWQSEFDMPWI--PRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHL 118 E WI + ++ H+ IDG+S+ +VVL+ +L LA+ +W I++ Q F+ Sbjct: 58 GSLAFETMTHWITIGPYTLNWHVGIDGISMPLVVLSTVLTTLAITSAWTPIDERQSQFYA 117 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 ++ + ++GVF A+D F++F FWE +LVPMYFLI +WG G R AA KFF+YT Sbjct: 118 LMLLMEASLLGVFTALDFFVWFVFWEFVLVPMYFLIGIWG-----GPRRKYAAIKFFVYT 172 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSG-------VEYLLMLGFFIAF 231 + L+M I +ALVF T + + + ++ + FI F Sbjct: 173 NVASLLMFIGFMALVFGLDVTTMDMPAIAQAIHAGQFGTTYGLGAETLKTVAFFAMFIGF 232 Query: 232 AVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAM 291 AVK+P VPLH WLPDAH QAPT SV LAG+LLK Y LLRF+ + P + ++A Sbjct: 233 AVKVPTVPLHTWLPDAHVQAPTPASVMLAGVLLKMGTYALLRFNFTMMPGIAQQYAVPIA 292 Query: 292 WLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLS 351 L V+ + YGA +A AQ D+KR++AY+SVS MG+V++ + + GA QM+AHGL Sbjct: 293 ALAVLSVIYGAMLALAQRDLKRIVAYSSVSSMGYVILGLVAYNYYGVGGATFQMVAHGLI 352 Query: 352 AAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMIL 411 + +F+ G +Y HTR + + G+ KM A+ + A +G+P F GE I Sbjct: 353 SGLMFMCVGVIYNTAHTRMVGDLSGIADKMPVTAAVFIAAAFGYMGLPLMAGFAGELFIF 412 Query: 412 FGSFQVVP----VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFM 467 G F + T ++ FG+V + Y L + R FG ++ +P +L + Sbjct: 413 LGGFGADFAHAQLFTALAMFGIVIVAGYLLFAMQRVLFGPFAAETDYDIVP-AALHDTVP 471 Query: 468 ILLLVVLLVLLGFYPQPILDTSHSAIGN 495 I+ L++L+++ G P A+ Sbjct: 472 IVALLLLVIVAGTVPNVFYGMIQDAVTP 499 >UniRef50_B9DJY9 Putative NADH dehydrogenase I chain L n=1 Tax=Staphylococcus carnosus subsp. carnosus TM300 RepID=B9DJY9_STACT Length = 824 Score = 320 bits (822), Expect = 6e-86, Method: Composition-based stats. Identities = 106/480 (22%), Positives = 192/480 (40%), Gaps = 37/480 (7%) Query: 41 ALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVL 100 AL + + S + +PW+P + +DGLS++ +L L+G Sbjct: 59 ALIAPILSALYFVFKISQTADSKITSVSLPWMPIIDLDFAFRLDGLSMIFALLITLIGTG 118 Query: 101 AVLCSWKEIEKYQ---GFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALW 157 VL + + K F+ L+ + ++GV LA + L + FWE+ + + LI+ W Sbjct: 119 VVLYANAYLSKEHDDLPRFYFYLILFMFAMLGVVLADNTILLYVFWELTSIASFLLISYW 178 Query: 158 GHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSS 217 + K A K F+ T G+ MLI + + + T +T SS Sbjct: 179 Y----NRKASQNGALKSFLITVFGGMFMLIGFIIIYSISGTNTIS---ELVTQTDTLRSS 231 Query: 218 GVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSL 276 ++ I K P H WLPDA +APT S + ++K Y L RF+ Sbjct: 232 PWFPFAVVCILIGAFTKSAQFPFHIWLPDAM-EAPTPVSAYLHSATMVKAGLYLLFRFTP 290 Query: 277 PLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGS-- 334 L + ++ I + +G+I + G+++A Q D+K L+AY+++S +G ++ + G Sbjct: 291 IL--SYASWVGYIVITVGIITLAVGSFVAVGQRDLKALLAYSTISQLGMIMSMVGFGMLT 348 Query: 335 -----------QLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKW 383 ++ + +I H L + LF+ G + TR++ +GGL + Sbjct: 349 YSLHKSFVEFFVISLFAGLFHLINHALFKSVLFMGAGIIDHETGTRNLADLGGLRKLLPV 408 Query: 384 LPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ----------VVPVITVISTFGLVFAS 433 + A+A G+P F+ + M + ++ +I+ V Sbjct: 409 TATIMTISAMAMAGLPFFNGFLSKEMFFTTLVNGRKLPIDDQIFMSIMLIIAIGASVLTF 468 Query: 434 VYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAI 493 VYSL M+ +FG + + +++V L L P + S Sbjct: 469 VYSLRMIKDTFFGPLNKEKLPHVPGHEPIGMYIAPVIIVCGLPLFFIIPNILGKYLISPA 528 >UniRef50_C0A9K9 NADH dehydrogenase (Quinone) n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A9K9_9BACT Length = 821 Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats. Identities = 106/500 (21%), Positives = 198/500 (39%), Gaps = 33/500 (6%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL I PF+ + R+ W AL+ ++ + + Sbjct: 4 LLIIAIFAPFVWLPVTAFAGRWLGSRTAWFALVAPVVSTVI---------LAALALDARA 54 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKY---QGFFHL 118 Q+ ++PWIP G+++ +DGLSL ++ +GVL L + ++ + G F+ Sbjct: 55 GAQTVVEIPWIPSLGLNLTFLVDGLSLFFALVVSGMGVLVALYAAAYLDDHYEWHGRFYA 114 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 L+ +G ++G LA ++ L F FWE+ + + LI K A + T Sbjct: 115 YLLLFMGAMLGTVLAGNLLLLFVFWELTGIASFLLIGFLHDKEESRSGARMA----LLVT 170 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 +GLVML + P S G+ + + + K Sbjct: 171 GLTGLVMLAGVALTGIAAGTWDLATLLAKGGEAFGPDSRGLLSVAFVLLAVGAMGKSAQF 230 Query: 239 PLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 P H WLP+A + APT S + ++K + + R + + + P+ + +G Sbjct: 231 PFHFWLPNAMA-APTPVSAYLHSATMVKLGVFFVARVFPIF--SDADLWMPLLVTVGFGT 287 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLA---YQGAVIQMIAHGLSAAG 354 + + A D+K ++A+++V+ +G ++ GS+ QG ++ + +H Sbjct: 288 MALASLFALLSHDLKAILAWSTVTTLGMLIGFYGMGSRTGANGVQGDLLHVASHVFFKGA 347 Query: 355 LFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGS 414 LF+ G + TRD+R +GGL ++ WL + A + G+PGT FV + L Sbjct: 348 LFMCAGIIDHATGTRDVRELGGLRRRLPWLAVVVTICAASMAGVPGTLGFVSKEYFLKAQ 407 Query: 415 FQ---------VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLREL 465 ++ L +S ++ ++G A++ + L Sbjct: 408 MAFLAQGGGGGWAIYAVGLAWLALTLKVAFSARLVAHVFWGPLTPG-ATEHFHAPARLML 466 Query: 466 FMILLLVVLLVLLGFYPQPI 485 +L V VL G +P + Sbjct: 467 VPPAILAVACVLFGVWPAWL 486 >UniRef50_C5QQQ5 CPA3 family monovalent cation:proton (H+) antiporter-3 subunit A n=2 Tax=Staphylococcus RepID=C5QQQ5_STAEP Length = 816 Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats. Identities = 117/528 (22%), Positives = 219/528 (41%), Gaps = 52/528 (9%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L +L+P I + RF ++ L + + L + S + Sbjct: 19 LHIAVLLPLIFALIIPILYRFVKRIHLGW--------FVLPVPIVLFIYFISLISITMSG 70 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQ--GFFHLNL 120 + W+P FG++ +L +DGL LL +L +G L VL S + K + G F+ L Sbjct: 71 NTVMKTLNWMPHFGMNFNLYVDGLGLLFSLLITGIGSLVVLYSIGYLSKSEQLGNFYCYL 130 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + +G ++GV L+ ++ + + FWE+ + LI+ W + K I A K I T Sbjct: 131 LLFMGAMLGVVLSDNLIILYLFWELTSFSSFLLISFW----REKKASIYGAQKSLILTVL 186 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTP---MSSGVEYLLMLGFFIAFAVKMPV 237 + L + + TF+ + ++ +S L M+ I K Sbjct: 187 ------GGLSLLGGIILLSLAADTFSIQTMIEKASEIQNSPYFILAMILVMIGAFTKSAQ 240 Query: 238 VPLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVI 296 VP + WLPDA +APT S + ++K Y + R + S + +G+I Sbjct: 241 VPFYIWLPDAM-EAPTPVSAYLHSATMVKAGLYLVARMTPIF--AISEGWVWTITLVGLI 297 Query: 297 GIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQ-------------LAYQGAVI 343 +F+ + A Q D+K ++A+++VS +G ++ + G+ + A+ Sbjct: 298 TLFWASLNATKQQDLKGILAFSTVSQLGMIMSMLGIGAVSYHYQGADSQLYVAGFVAAIF 357 Query: 344 QMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGN 403 +I H LF++ G + TR+++ +GGL + M +++ A++ G+P Sbjct: 358 HLINHATFKGALFMITGGVDHATGTRNVKKLGGLLTIMPISFTMTIITALSMAGVPPFNG 417 Query: 404 FVGEFMILFGSFQVVP-----------VITVISTFGLVFASVYSLAMLHRAYFGKAKSQI 452 F+ + L V + +I+ G +F VYS+ + +FGK K Sbjct: 418 FLSKEKFLEAMIDVTHADLMSLNTLGIIFPIIAIVGSIFTFVYSIKFIMHIFFGKYKPDS 477 Query: 453 ASQELPGMSLRELFMILLLVVLLVLLGFYPQPIL-DTSHSAIGNIQQW 499 + S+ L ++L +L+V+ G +P + A + Q Sbjct: 478 LPKSAHESSMLMLLSPIILTILVVVFGLFPSILTQSIIEPATQAVSQT 525 >UniRef50_O21047 NADH-ubiquinone oxidoreductase chain 4 n=3 Tax=Dictyostelium RepID=NU4M_DICDI Length = 540 Score = 319 bits (818), Expect = 2e-85, Method: Composition-based stats. Identities = 132/449 (29%), Positives = 215/449 (47%), Gaps = 15/449 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERF----GVKVPRWIALITMGLTLALSLQLWLQGGYSLTQS 57 ++ I+ IG + R K R L G+ + LS + + + + Sbjct: 3 IIAISIMNVVIGIAILGVILRKKIMPNQKFQRIFILGVQGILIVLSGIMLIGCEGTDIIN 62 Query: 58 AGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKY-QGFF 116 P I+I +IDG+S + + LT +L + L S + I++ + F Sbjct: 63 RISPYINMVTVYS--NNVNINIGYSIDGISAIFIFLTIILILSCNLISIRVIKEKTEQKF 120 Query: 117 HLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFI 176 + L+ +I F A D+ + +E L+PM +I +WG + AA + I Sbjct: 121 QIMLLLTEILIINFFAATDLVQLYIVYEATLIPMVIMIGVWGSRTEKKI----AAFQILI 176 Query: 177 YTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMP 236 YT + ML++I L + G + + V L+ +GFFI FAVK+P Sbjct: 177 YTLIGSIFMLMSIGILY----STLGTTDYIMIREYIDVLPENVRKLIFIGFFIGFAVKIP 232 Query: 237 VVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVI 296 + PLH WL AH +APTAGSV LAGILLK YG +R+++ LFP+ + PI + +I Sbjct: 233 IAPLHLWLLRAHVEAPTAGSVLLAGILLKLGGYGYIRYNIGLFPDLCEYYFPIIGGICLI 292 Query: 297 GIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLF 356 I Y Q D+KR++AY+S+SHM +++ +++G +G +I MI HG+ + GLF Sbjct: 293 SILYTGIATLTQLDVKRIVAYSSISHMNVIVLGLFSGVLQGIEGGIILMIGHGVVSGGLF 352 Query: 357 ILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ 416 + G +Y+R TR + L M + L + + P T NFVGE +I G + Sbjct: 353 LCIGVIYDRCKTRIVYAYNNLVHVMPIMAILFFLLVLGNIAFPITSNFVGELLIFIGLIK 412 Query: 417 VVPVITVISTFGLVFASVYSLAMLHRAYF 445 +I S ++ ++YS + +R +F Sbjct: 413 KNIIIAFFSALSMIVTAIYSFWLYNRIFF 441 >UniRef50_Q37375 NADH-ubiquinone oxidoreductase chain 4 n=2 Tax=Eukaryota RepID=NU4M_ACACA Length = 497 Score = 318 bits (817), Expect = 2e-85, Method: Composition-based stats. Identities = 142/441 (32%), Positives = 234/441 (53%), Gaps = 11/441 (2%) Query: 53 SLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKY 112 +++ A + +F W+ + + +D +SLL ++LT L + +L SW I+ Sbjct: 61 NISVLAEFDIYNFQFYKQWLFLYNFHYVIGMDNISLLFLLLTFFLTPICILISWNSIKYR 120 Query: 113 QGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAAT 172 F + L++I + +F +D+ F+ F+E +L+PM+ LI +WG + +I A Sbjct: 121 YNSFIICLIFITFILFNIFCVLDLVFFYIFFESILIPMFILIGVWGS----RQRKIHAVY 176 Query: 173 KFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFA 232 + F YT L+ML+ IL + + + T + L NT S + +L FF AF Sbjct: 177 QLFFYTLLGSLLMLLGILVIY------SHIQTTDIRVLYNTNFSFYRQLILWASFFFAFC 230 Query: 233 VKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMW 292 VK+P+ P H WLP+AH +APT GSV LAG+LLK YGLLRF +P+F +A+ F P+ Sbjct: 231 VKVPLFPFHIWLPEAHVEAPTVGSVILAGVLLKLGTYGLLRFVIPIFCDATYFFLPLVYT 290 Query: 293 LGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSA 352 L ++GI Y Q D+K++IAY SVSHM FV++ ++T + G+V M++HG+ + Sbjct: 291 LCLLGIIYTCCSTIRQVDLKKVIAYASVSHMSFVILGLFTSNIQGIGGSVFLMLSHGIVS 350 Query: 353 AGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILF 412 +GLF G +Y+R TR +R GL S M ++ + PGT +F+GEF+IL Sbjct: 351 SGLFFCIGCVYDRYKTRILRYYSGLVSTMPIFSLCLFILILSNISFPGTSSFIGEFLILL 410 Query: 413 GSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLV 472 G F+ +I+TF ++ +VYS+ + +R F + S +E + + Sbjct: 411 GLFENNHFAALIATFSIILTAVYSIWLYNRIIFNRLVVNY-YLRFSDFSKKEFVVGFIFC 469 Query: 473 VLLVLLGFYPQPILDTSHSAI 493 + +L G I+ + + Sbjct: 470 FITILFGLKGSYIISLIEAPL 490 >UniRef50_Q12ZH4 Na+/H+ antiporter subunit n=2 Tax=Methanosarcinaceae RepID=Q12ZH4_METBU Length = 513 Score = 318 bits (817), Expect = 2e-85, Method: Composition-based stats. Identities = 137/511 (26%), Positives = 226/511 (44%), Gaps = 21/511 (4%) Query: 5 WLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQ 64 L+ +P + L R V +W+ + + +S+ L LQ Q + +W Sbjct: 11 LLVAVPILMSALMIFL-RSNANVQKWLNVSVSLAMMLISIILLLQVWNGGIQVYEVGEWG 69 Query: 65 SEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQ--GFFHLNLMW 122 I L D LS MVVL+ ++ LA+L S IE +H Sbjct: 70 KY-----------GIVLVADLLSSGMVVLSSIVSFLALLYSLDYIEGRSLNSTYHSLFNL 118 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFL-IALWGHKASDGKTRITAATKFFIYTQAS 181 ++ G+ G FL D+F F F+E++L+ L IA + ++ A K+ I Sbjct: 119 LVAGLNGTFLTGDIFNMFVFFEILLLASCGLVIANEKGGVTKSSDKMEATFKYLILNMIG 178 Query: 182 GLVMLIAILALVFVHYNATGV-WTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 VMLIA+ +L + + Y + L F + F K + P+ Sbjct: 179 SFVMLIAVASLYATVGTLNMADLSVKISTMSAAGTLPWHIYAIALLFIVVFGNKAAIFPM 238 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H WLPD H AP+ S L+G+++K AYG+LR +F +A PI + L ++ I Sbjct: 239 HYWLPDVHPTAPSPISAMLSGVMIKVGAYGILRIFFLIFRDALFLLQPIIILLALVTIII 298 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 GA A Q D+K+L+AY+SVS +G+V + I GS A A++ M H ++ + LF+ G Sbjct: 299 GAVSAVGQNDVKKLLAYSSVSQIGYVFLGIGIGSVYALAAALVYMANHAIAKSMLFLTSG 358 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 + TRDMR MGG+ + L A++ G+P G FV +F++ + Sbjct: 359 GIIHHAGTRDMRHMGGMNKTSPIMSIAFLIGAMSIAGLPPMGGFVAKFILFDAGLRAEYY 418 Query: 421 I-TVISTFGLVFASVYSLAMLHRAYFGKAK--SQIASQELPGMSLRELFMILLLVVLLVL 477 I I+ F VF Y ++G+ + + SL I+ L L+ + Sbjct: 419 IPVAIALFFAVFTLFYMFRAWLLMFWGETRDVEEYGEYSSHKPSLMIALPIVSLAALVFI 478 Query: 478 LGFYPQPILDTSHSAIGNIQ--QWFVNSVTT 506 G Y +P++ + + + Q ++++V T Sbjct: 479 FGVYAEPLIALAQAIAEQLIDPQPYIDAVMT 509 >UniRef50_B9XFX1 Proton-translocating NADH-quinone oxidoreductase, chain M n=2 Tax=Verrucomicrobia RepID=B9XFX1_9BACT Length = 498 Score = 318 bits (816), Expect = 3e-85, Method: Composition-based stats. Identities = 166/503 (33%), Positives = 263/503 (52%), Gaps = 26/503 (5%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L W I I FIG F+ V+ R +AL+ L L + + Q Sbjct: 1 MLAWTIYISFIGVFVLLLLPAGAVRAARKVALLAAVLGLLGGIS-------GILQHKAPT 53 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 + + +PW+P GI L DG+SL +V+LTG+ V+ +L SW IE F + Sbjct: 54 EIDTITKVPWVPSLGIEYFLGADGISLTLVLLTGIAAVVGILFSWN-IEHRAKEFFAFYL 112 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 ++GGV GVFL+ D+FL F F+E+ ++P YFLIA+WG + A K +Y+ Sbjct: 113 ALIGGVYGVFLSFDLFLLFVFYELAIIPKYFLIAIWGST-----NKEYGAMKLALYSFLG 167 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 ++LI ++A + V T N EL ++ F+ FA+ + P H Sbjct: 168 SAMVLIGLVATYV----MSPVKTMNLLELAKYAFPESFQHWAFPLVFVGFAILAGLWPFH 223 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 W P H APTA S+ LAG+++K AYG LR ++ LFP A + + L VIGI YG Sbjct: 224 TWAPTGHVAAPTAASMLLAGVVMKLGAYGALRVAMTLFPQGLAIWKDVIGLLAVIGIVYG 283 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG- 360 A +A Q D K +I Y+SVSHMGFVL+ + T + + + GAV+QM +HG+ A LF + G Sbjct: 284 AMVALVQKDFKFVIGYSSVSHMGFVLLGLLTLNTIGWSGAVLQMFSHGIIAGLLFGVVGR 343 Query: 361 QLYERIHTRDMRMMG--GLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVV 418 +Y+R HTR++ ++ GL + + ++A++GMPG F E +L G+++ Sbjct: 344 MVYDRTHTRELPVLKKLGLSKALPFAACTFALASLASMGMPGFSGFAAELQVLIGAWKAF 403 Query: 419 PVITVISTFGLVFASVYSLAMLHRAYFGKAKSQI------ASQELPGMSLRELFMILLLV 472 PV V++ FG++ Y+L +L ++F I A+ LP +S+ E +L+ Sbjct: 404 PVYAVLAGFGVLVGVAYTLRVLQLSFFNDPTPAIEGEAGEATHPLPTISVPERLGAAILL 463 Query: 473 VLLVLLGFYPQPILDTSHSAIGN 495 + +++G YP+ +LD + + Sbjct: 464 GITIVIGIYPKLLLDLIGPSFDS 486 >UniRef50_Q2FZV1 Na(+)/H(+) antiporter subunit A1 n=72 Tax=Bacillales RepID=MNHA1_STAA8 Length = 801 Score = 316 bits (812), Expect = 9e-85, Method: Composition-based stats. Identities = 117/531 (22%), Positives = 224/531 (42%), Gaps = 46/531 (8%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL +++P I + RF ++ L + + + + Sbjct: 3 LLHIAVILPLIFALIIPILYRFFKRIHLGW--------FVLPVPIVIFIYMLTLIKTTMS 54 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQ--GFFHLN 119 + W+P FG++ L +DGL LL +L +G L VL S + K + G F+ Sbjct: 55 GNTVMKTLNWMPHFGMNFDLYLDGLGLLFSLLISGIGSLVVLYSIGYLSKSEQLGNFYCY 114 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 L+ +G ++GV L+ ++ + + FWE+ + LI+ W + + I A K I T Sbjct: 115 LLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFW----RERQASIYGAQKSLIITV 170 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 GL +L I+ L + + + + + +S M+ I K P Sbjct: 171 FGGLSLLGGIILLAIPTQSFSIQY---MIQHASEIQNSPFFIFAMILIMIGAFTKSAQFP 227 Query: 240 LHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 + WLPDA +APT S + ++K Y + R + AS + +G+I + Sbjct: 228 FYIWLPDAM-EAPTPVSAYLHSATMVKAGLYLIARMTPIF--AASQGWVWTVTLVGLITL 284 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGS-------------QLAYQGAVIQM 345 F+ + A Q D+K ++A+++VS +G ++ + G+ A+ A+ + Sbjct: 285 FWASLNATKQQDLKGILAFSTVSQLGMIMAMLGIGAISYHYQGDDSKIYAAAFTAAIFHL 344 Query: 346 IAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFV 405 I H LF++ G + TRD++ +GGL + M +++ A++ G+P F+ Sbjct: 345 INHATFKGALFMITGAVDHSTGTRDVKKLGGLLTIMPISFTITVITALSMAGVPPFNGFL 404 Query: 406 GEFMILFGSFQVV-----------PVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIAS 454 + L +F + +I G VF VYS+ + +FG+ K + Sbjct: 405 SKESFLETTFTASQANLFSVDTLGYLFPIIGIVGSVFTFVYSIKFIMHIFFGQYKPEQLP 464 Query: 455 QELPGMSLRELFMILLLVVLLVLLGFYPQPILD-TSHSAIGNIQQWFVNSV 504 ++ +S+ L +L L+++ G +P + + A +I ++ V Sbjct: 465 KKAHEVSILMLLSPAILATLVIVFGLFPGILTNSIIEPATSSINHTVIDDV 515 >UniRef50_Q6MDQ4 Putative NADH-ubiquinone oxidoreductase chain M n=2 Tax=Parachlamydiaceae RepID=Q6MDQ4_PARUW Length = 481 Score = 316 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 153/489 (31%), Positives = 243/489 (49%), Gaps = 25/489 (5%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L WL LIPF+ L K +W +L + L Sbjct: 4 LFWLFLIPFVSSILIGILPINEKKHLKWASLGLSLIPFFFLL------------GNHFVW 51 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMW 122 S F W I+ L ID +SLL + LT ++ + + E F+ +++ Sbjct: 52 IGSFFQYEWFALLSITFSLEIDSISLLFLYLTAIIIPIVFMNVNSEKLSNPKLFYGLILF 111 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 + G + G F+ D+ F FWE ML+P+YFL+ +WG G R AA KF +Y A Sbjct: 112 LQGLLGGFFMTRDLVFFTIFWEAMLLPIYFLMNMWG-----GSKRHEAAIKFIVYMFAGS 166 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 +M+ A+LAL F+ TF+ +L + L+ F +AFAVK P+ P H Sbjct: 167 ALMIAAVLALYFL------FGTFDLAQLSTQESTYPYVNLIAAAFLLAFAVKTPLFPFHA 220 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGA 302 WLPD + QA T+G++ L+G+L K YG++R L LFP+ ++P + L + G+ YGA Sbjct: 221 WLPDTYYQASTSGTILLSGLLSKAGIYGIIRIGLGLFPHVMKAWSPWLLGLAITGVLYGA 280 Query: 303 WMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQL 362 A+ Q D KRL+AY+S SH+ F+LI ++ +A +GA++Q HG++ LF++ G L Sbjct: 281 LAAWRQNDFKRLLAYSSFSHVNFILIGLFIFDPIAQKGAILQAFNHGITITALFLVAGYL 340 Query: 363 YERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVIT 422 R+ + GL M L L+ FF ++++ +PGT NFVGE +I G F P +T Sbjct: 341 ENRLGFTIIGTSKGLARYMPNLCWLTFFFVLSSIALPGTNNFVGELLIFIGLFGKHPYLT 400 Query: 423 VISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYP 482 ++ +VF+ +Y L + + YF + ++ +E ++ L+ L + +G YP Sbjct: 401 ALTGLTIVFSVIYMLRWMQKMYFEEPSPYQVQW--IDLTKKEFLIVAPLIFLNLWIGLYP 458 Query: 483 QPILDTSHS 491 IL + Sbjct: 459 MGILKYLDA 467 >UniRef50_Q0FXW0 NADH dehydrogenase subunit 4 n=3 Tax=Alphaproteobacteria RepID=Q0FXW0_9RHIZ Length = 500 Score = 316 bits (811), Expect = 1e-84, Method: Composition-based stats. Identities = 168/502 (33%), Positives = 260/502 (51%), Gaps = 28/502 (5%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L ILIP + + + R +AL L+ + +W+ + P Sbjct: 1 MLTLSILIPLLASLGLFGWSNVTKEKARLVALGASTLSFLCLIIVWIGFDTG----SEAP 56 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 +QS ++ WI G++ + +DG+SL + +++GLL L + E + ++ + Sbjct: 57 AFQSVAEVGWIDALGVAWRVGVDGMSLAVSLMSGLL-FLCSIAWPAETKGRARQYYGWFL 115 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 ++ G +G+FL++D+ +F+ F+++ LV MYFLI WGH AA KFF+YT A Sbjct: 116 FLQGVSLGLFLSLDLLVFYVFFDLTLVGMYFLIGRWGH-----DQAEYAALKFFVYTLAG 170 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGV---EYLLMLGFFIAFAVKMPVV 238 L +L+AIL LV A G TF+ EL+ G L++ GF + FA+K P+V Sbjct: 171 SLAILLAILGLVL----ANGTLTFDIRELIAVQPLGGTDLRSSLILFGFLVGFAIKTPLV 226 Query: 239 PLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 P H WLP AH +AP S LAG+LLK YG++R + A +A + ++ I Sbjct: 227 PFHTWLPLAHVEAPGPASAVLAGVLLKMGTYGMVRIPFQMMRETFAAYAFPLAIVALVAI 286 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGS---------QLAYQGAVIQMIAHG 349 +G+ +A AQT++KR IAYTSV+HMG+ ++ I LA GAV +M+AHG Sbjct: 287 LWGSLVALAQTNLKRRIAYTSVNHMGYTVLGIAAAGAMIGSESVRTLALSGAVTEMVAHG 346 Query: 350 LSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFM 409 L LF++ G Y R T D+ GGL L A A+ G+PG FV EF Sbjct: 347 LITGALFLIAGSFYTRAGTYDLSRFGGLARLTPLLMVAYFLAAFASFGLPGLAGFVAEFQ 406 Query: 410 ILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMIL 469 I GSF V P++ I GLV + L M +FG+ K +IA+ + + E++ + Sbjct: 407 IFAGSFGVYPIVAAIGLLGLVITAALFLMMGQTIFFGETKPEIAA--IKDLKPAEIWPLA 464 Query: 470 LLVVLLVLLGFYPQPILDTSHS 491 +L+VL+VL+G P +LD + Sbjct: 465 VLLVLVVLIGIAPGWLLDLIQT 486 >UniRef50_B2XX63 NADH-ubiquinone oxidoreductase chain 4 n=3 Tax=Dictyosteliida RepID=B2XX63_9MYCE Length = 535 Score = 316 bits (810), Expect = 1e-84, Method: Composition-based stats. Identities = 137/497 (27%), Positives = 237/497 (47%), Gaps = 17/497 (3%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L ++ I + + + ++ + L + ++ L ++ Y Sbjct: 42 LNIFNVLFIIVLSCLGLIHKNKEETIKRVSYWSSLLFVIVATFLTIEYTY--LTDFEKIG 99 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMW 122 D + I+I +IDG+ ++ + LT LL V VL SW +++ + + L Sbjct: 100 MVFNSDYIYTGMLNINIGSSIDGIGIIFIWLTTLLIVSCVLISWTVVKEEVKMYMILLFI 159 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 I +I +F ID+ F+ +E +L+P+ +I++WG + AA + F+YT Sbjct: 160 IEILLINLFGVIDLIHFYIIYESILIPIVIMISIWGSREEKKI----AAYQIFVYTLIGS 215 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 + ML AI + ++ G + + +S + LL +G FI FAVK+P+VPLH Sbjct: 216 IFMLSAIGYIYYMF----GTTDYFIIKEGIWTLSDIEQKLLFIGLFIGFAVKIPMVPLHL 271 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFP-NASAEFAPIAMWLGVIGIFYG 301 WL AH +APTAGSV LAGILLK YG LRF++ LF N F P + +I I Y Sbjct: 272 WLLRAHVEAPTAGSVLLAGILLKMGGYGFLRFNVGLFSSNILDFFFPYITVICIISILYT 331 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 Q DIK++IAY+S+SHM V++ I++ + +G+V M++HG + LF+ G Sbjct: 332 GIATILQLDIKKIIAYSSISHMNVVVLGIFSQNIQGIEGSVFLMVSHGFVSGSLFLCIGM 391 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 +YE+ +R + L M + +A + P T +F+GE +I G + + Sbjct: 392 IYEQTKSRMLYSYNNLAVVMPNYAIIFFLLTLANIAFPITSSFIGELLIFVGVMKANIIA 451 Query: 422 TVISTFGLVFASVYSLAMLHRAYFG------KAKSQIASQELPGMSLRELFMILLLVVLL 475 G++ YS + +R +F + K + ++ RE ++L ++ + Sbjct: 452 AFFGGMGMIITVFYSFWLYNRLFFDNGMLDEQVKFLNKKGKFRDINEREFASVVLPLIGV 511 Query: 476 VLLGFYPQPILDTSHSA 492 +LG P +L+ H + Sbjct: 512 GVLGVAPNVLLNIIHMS 528 >UniRef50_C1F221 NADH dehydrogenase I, M subunit n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F221_ACIC5 Length = 543 Score = 315 bits (808), Expect = 2e-84, Method: Composition-based stats. Identities = 150/531 (28%), Positives = 246/531 (46%), Gaps = 39/531 (7%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L WL +PF G F R + R +A++ +L +L LW+ + + Sbjct: 7 LTWLTALPFAGAFAVLALSR-NRALARALAILIAVASLLGTLALWVHFNAASS------G 59 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMW 122 Q E W G++ H+ IDGL LL++VL+ ++ +++++ SW + +++ Sbjct: 60 MQFEQQYAWASSIGLTYHVGIDGLGLLLLVLSAIVVLMSLIASWSNPAHGP-VYFALVLF 118 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 + G+ G F A++ +F +WE+ L+P +FL+ WG G R A+ +FF+YT Sbjct: 119 LECGLFGTFTALNFLHWFLYWELTLIPAFFLVRQWG-----GAKRAQASLQFFLYTMVGS 173 Query: 183 LVMLIAILALVFVHYNATG------------VWTFNYEELLNTPMSSGVEYLLMLGFFIA 230 + +L+A LAL + S + LL F+ Sbjct: 174 VALLVAFLALYLAAGTFDFLALAQWAHQGQLTAALQQQFAWTGWSGSSLALLLFWAVFLG 233 Query: 231 FAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIA 290 FAVK PVVP H WLP +++A + ++ L G + K YG LR LP+FP + Sbjct: 234 FAVKTPVVPFHTWLPATYAEASSETTMLLTGAMSKMGVYGFLRILLPIFPEQMQQMLTPL 293 Query: 291 MWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQL-------------A 337 +WL + I A A+AQ D+KR AY+SV+H+G+ ++ I ++ A Sbjct: 294 LWLALASIVLPALAAWAQRDLKRTFAYSSVNHLGYCVLGICVVARFTGADPSLLLEKSAA 353 Query: 338 YQGAVIQMIAHGLSAAGLFILCGQLYERI-HTRDMRMMGGLWSKMKWLPALSLFFAVATL 396 G ++Q+ +HGL+AA LF L R R + GGL + L A+L Sbjct: 354 LTGVLLQIFSHGLTAAALFWFVALLERRNQGKRALTDFGGLRKIVPVFCGLMGIAIFASL 413 Query: 397 GMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQE 456 G+PG F GEF+I G F + ++ GL+F +V+ LA+L R +FG + Sbjct: 414 GLPGLNGFPGEFLIFKGVFPLAGWAAALALLGLLFTAVFLLAVLQRVFFGPMRESQQQAP 473 Query: 457 LPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNSVTTT 507 +P ++ E F ++ L+++LGFYPQ I + + T Sbjct: 474 MPDLTAAERFAFAPVIALMLVLGFYPQLIAGKMTGTVAQWTAPQAAPLQTA 524 >UniRef50_D2PVJ1 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PVJ1_9ACTO Length = 519 Score = 315 bits (808), Expect = 2e-84, Method: Composition-based stats. Identities = 168/493 (34%), Positives = 241/493 (48%), Gaps = 34/493 (6%) Query: 24 GVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSA------------------GIPQWQS 65 G ++ + GL LA S+ LW+ + G Q + Sbjct: 27 GDRIAALYGSVISGLVLAGSVVLWVGYLRRPRGAGTLEAGVIDSDSADRGEVPGRLQSWA 86 Query: 66 EFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEK--YQGFFHLNLMWI 123 E D+ WIP + HLA+D +SL +++L+ LL L L S + + L+ I Sbjct: 87 ETDLTWIPALDVRFHLAVDAISLPLILLSALLVFLCCLYSLRITPRIGRTRSLIALLLVI 146 Query: 124 LGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGL 183 GVIG F A D+ LFF F+E++L+PM+ +I +WG D R AAT F + T Sbjct: 147 ETGVIGTFAAADLVLFFLFFEVVLIPMWLIIDVWGDHH-DRAGRRRAATTFVLMTVLGSA 205 Query: 184 VMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGW 243 VML+ L + G + G + + AVKMP+ PLH W Sbjct: 206 VMLVGFLLVY----RQAGTFDLELLGQDPVTGGHGAALAAAILIALGLAVKMPLWPLHIW 261 Query: 244 LPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAW 303 LPDAH++APT GSV LAG+LLK +YGL+R LP+ P+A+ AP + I G+ Sbjct: 262 LPDAHAKAPTVGSVLLAGVLLKLGSYGLVRILLPVLPDATVTIAPYLAGFSTVAIVAGSL 321 Query: 304 MAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLY 363 AQTD+KRLIAY+SV HMGF+ + I T S GA+ IAHGL LF L G + Sbjct: 322 ACLAQTDVKRLIAYSSVGHMGFIGLGIATLSPEGVAGALFANIAHGLITGLLFFLAGAIK 381 Query: 364 ERIHTRDMRMMG-GLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ------ 416 +R T ++R +G L++++ + L F +A+LG+PG F GE + L G+F+ Sbjct: 382 DRHDTSELRAIGRALYARLPRISVLLTFACLASLGLPGLAGFWGEMLALMGAFRPADGLP 441 Query: 417 --VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVL 474 V+ VI+ G V + Y L ++ G A+ +S EL LVVL Sbjct: 442 RTTYLVLMVIAGLGTVLTAAYFLRLVRNLCQGDPAEYPATAFAVDLSRIELVAWAPLVVL 501 Query: 475 LVLLGFYPQPILD 487 V+LG P +LD Sbjct: 502 TVVLGLCPWLLLD 514 >UniRef50_Q1AVJ1 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVJ1_RUBXD Length = 484 Score = 315 bits (808), Expect = 3e-84, Method: Composition-based stats. Identities = 162/503 (32%), Positives = 264/503 (52%), Gaps = 21/503 (4%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 M+ I IP + G + R ++ R+ A+ + + L+L ++ G L A Sbjct: 1 MITTATIFIP-LLGAILVLLLRGDERLVRYAAIGVAAVPVLLALYIYFAFGDDLDAPA-- 57 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 ++ WI I + +DG+ M L+ LL ++AV+ SW +I + GF+ L Sbjct: 58 ----LSQELTWIESLDIGYRVGLDGIGFGMFFLSALLTLIAVVASW-DIRENLGFYFALL 112 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 G++GVF + D+ LF+ F+E+ L+PMY ++ +WG + R AA KFFIYT Sbjct: 113 FLAEVGMLGVFASRDLVLFYVFFEITLIPMYLMVGIWG-----DENRRAAAIKFFIYTFL 167 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELL-NTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 ML LAL + TF+ EL +S + + + +K+P VP Sbjct: 168 GSTAMLAGFLALGVL------SGTFSIPELGEAGGLSRAAQIAIAVPVLFGLLIKVPAVP 221 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 LHGWL D + +P + +V L+G+L K +G+L+ ++PL P+ F P LGVI I Sbjct: 222 LHGWLLDVYVSSPVSTNVVLSGVLPKLGTFGILKIAIPLLPDGVEPFLPYLAVLGVINII 281 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 YGA++AF Q D+K L+AY+S+ +GF+L+ + + + Y GAV Q +AHGL +A LF+L Sbjct: 282 YGAFVAFLQPDLKALVAYSSIGTLGFILLGAASANAVGYNGAVFQQVAHGLYSALLFLLV 341 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP 419 G + R TR + +GGL ++M W L A+A +G+PG FV EFM + G + P Sbjct: 342 GIIAARTGTRRISELGGLAARMPWAGGLLALGALAAMGLPGLAVFVSEFMSIMGGYTTYP 401 Query: 420 VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLG 479 V V++ G++ +++Y L ML R FG + A +++ E+ ++ L LL++LG Sbjct: 402 VQGVLAALGIILSAMYLLYMLARVIFGPIREP-AYEQIGDAGPVEMAAVVPLAALLLVLG 460 Query: 480 FYPQPILDTSHSAIGNIQQWFVN 502 F+P ++ A+ + Sbjct: 461 FFPALLISVQRPAVEAVLAAIGG 483 >UniRef50_B7HY49 NADH dehydrogenase (Ubiquinone), M subunit n=71 Tax=Bacillus cereus group RepID=B7HY49_BACC7 Length = 500 Score = 315 bits (807), Expect = 4e-84, Method: Composition-based stats. Identities = 159/504 (31%), Positives = 255/504 (50%), Gaps = 18/504 (3%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 +LL + I P +G L T + + R + L L +++ L + S Sbjct: 4 LLLTFFIFSPLLGILLLTLTPKKESRTVRALGLFGTVLPFGMAIVLACTYASGKSLSLFD 63 Query: 61 PQWQSEFDMPWIPR----FGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFF 116 + + + F I L IDGLSL+M+VLT LL +LA + ++ I++ F Sbjct: 64 EKVKWIKFGDFAAVDKRWFSIYYELGIDGLSLVMMVLTALLAMLAAIAAFT-IKRNLKAF 122 Query: 117 HLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFI 176 ++ L+ + G++GVF A ++ LFF F+E+ L PM+ LI WG +S+ AA + I Sbjct: 123 YMLLLMLEIGMLGVFAAQNLMLFFIFFEITLPPMFLLIGKWGKLSSE-----KAAYSYLI 177 Query: 177 YTQASGLVMLIAILALVFVHYNATGV----WTFNYEELLNTPMSSGVEYLLMLGFFIAFA 232 Y ++LI L + + + +++ L L IAFA Sbjct: 178 YNGIGSAILLIVFSVLFAKTGTTNITELKEILTSVGAGGGMAVPNSLQFGLFLSIMIAFA 237 Query: 233 VKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMW 292 +K+PV PLH W+ + H +A A + AG+LLK AYG++RF LFP EFA + Sbjct: 238 IKLPVFPLHRWMVNVHIEAHPAVVMLHAGVLLKIGAYGIIRFGQGLFPEYFREFATLIAI 297 Query: 293 LGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSA 352 LGVI + YGA++A QTD ++++AY+S+SHMG VL+ + + QGA+ Q+++HGL A Sbjct: 298 LGVINLLYGAFLALIQTDFRKVLAYSSISHMGIVLMGLAALNAPGTQGALFQVVSHGLIA 357 Query: 353 AGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILF 412 A LF L G + +R T ++ +GGL + L L +A+LG+PG FV EF+ Sbjct: 358 ALLFFLLGVIEQRFGTSNITALGGLAKSVPVLSGFFLAGGMASLGLPGMSGFVSEFLAFL 417 Query: 413 GSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLV 472 G FQ PVI G++ +VY L + FGK + + + + E ILLL+ Sbjct: 418 GLFQAEPVIAAAGVLGIILTAVYVLRATLQVTFGKKEWEAKA----DIHGWEYVPILLLI 473 Query: 473 VLLVLLGFYPQPILDTSHSAIGNI 496 ++ +G P+ + D + + + Sbjct: 474 FCIIAIGVMPEILGDPLQNTLKTL 497 >UniRef50_B2A3T0 NADH dehydrogenase (Quinone) n=2 Tax=Clostridia RepID=B2A3T0_NATTJ Length = 500 Score = 314 bits (806), Expect = 4e-84, Method: Composition-based stats. Identities = 123/505 (24%), Positives = 227/505 (44%), Gaps = 32/505 (6%) Query: 5 WLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQ 64 ++L P I + + E+ + ++++T +T + ++ + Sbjct: 13 LIVLFPLIMTGVIFLVEQKSIFGRNLLSVVTSAITFLMVAAMYPVVIKGEVIYYQLANL- 71 Query: 65 SEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEK--YQGFFHLNLMW 122 IP FGIS +D L + +L + +L + S + ++K Y G ++ L Sbjct: 72 -------IPPFGIS--FMVDTLGFGLSLLASFIWMLVTIYSLEYMKKENYTGRYYPALSL 122 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 L G +G+FLA D+F F F+E+M + Y LI ++ K + A K+ I T G Sbjct: 123 TLSGSMGLFLAGDLFTMFIFFEIMSLVSYLLII-----HNETKEALRAGYKYLIVTIIGG 177 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 L + I+ + T E+ + + + L F I F +K +VPLH Sbjct: 178 LFLFFGIIITFEL------SQTITLSEMGIISTPTSLAFAGFLSFVIGFGMKAGMVPLHI 231 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNAS---AEFAPIAMWLGVIGIF 299 WLP+AH AP+ S L+GI++KT AYGL+R +F A + I + VI IF Sbjct: 232 WLPEAHPVAPSPASALLSGIMIKTGAYGLIRIMFHVFDYQMILEANWHLILAVVAVITIF 291 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 G+ +A Q D+KR +AY+S+ MG++L+ + ++ A G + + +H + LF+ Sbjct: 292 LGSAVAITQEDLKRRLAYSSIGQMGYILLGLAILTETAMTGDIFHIFSHAFMKSTLFLAA 351 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVV- 418 G + + + + + G+ M A+A +G+P F+ ++ + G+ + Sbjct: 352 GAMIMKTGKKKIADLKGVGRAMPLTMLSFTIAALAMIGIPPLNGFISKWSLSLGALEAGQ 411 Query: 419 PVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQE----LPGMSLRELFMILLLVVL 474 P VI + SVY L +++ AYFGK++ E + ++ + + +L Sbjct: 412 PYYVVILLISSLMNSVYYLPIINTAYFGKSEETDDDVESKGVISEAPMKMVMPVAILGFS 471 Query: 475 LVLLGFYP-QPILDTSHSAIGNIQQ 498 ++L +P + + A + Sbjct: 472 CLILSLFPTNIPYELAQLAAKALIN 496 >UniRef50_UPI0001C30612 NADH dehydrogenase subunit 4 n=1 Tax=Phaeoceros laevis RepID=UPI0001C30612 Length = 487 Score = 314 bits (806), Expect = 4e-84, Method: Composition-based stats. Identities = 147/479 (30%), Positives = 246/479 (51%), Gaps = 25/479 (5%) Query: 21 ERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIH 80 +++ R I T +T S W++ S ++Q + W P I+++ Sbjct: 30 PDSRIQLIRSIGPRTFLITFLYSPFFWIEFDNS------TAKFQFVESIRWPPYSNINLY 83 Query: 81 LAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFF 140 + IDG+ L VLT L + + W I+ Y+ + + + +I V D LF Sbjct: 84 IGIDGIFLSSAVLTTFLIPIRISVGWSSIKSYKKEYMIAFLIRESLMIAVSRMSDFLLFH 143 Query: 141 FFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNAT 200 F+E + + M+ + +I AA + F+YT + + ML+AI ++ F Sbjct: 144 VFFESVSISMF------------RQRKIQAAYQSFLYTLSGFVFMLLAISSISFQ----- 186 Query: 201 GVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLA 260 T + LL T S + LL + FF +FAVK+P+VP+H LP+A+ +APTAGSV A Sbjct: 187 -TGTTDLRILLTTESSEWRQVLLRIAFFASFAVKVPMVPVHIRLPEAYVEAPTAGSVISA 245 Query: 261 GILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSV 320 GIL K YG LRFS+ +FP + F L VI I Y Q D+K++IAY SV Sbjct: 246 GILSKLGTYGSLRFSILMFPEVTFFFISFICTLSVIAIIYTPLTTVRQIDLKKMIAYFSV 305 Query: 321 SHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSK 380 +HM FV I +++ + +G++ M++HGL + G LY+R TR ++ GGL S Sbjct: 306 AHMNFVTIGMFSLNIQGIEGSISPMLSHGLVLLAPPLCVGALYDRHKTRLVKYYGGLVST 365 Query: 381 MKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAML 440 M +SLFF +A + + G+ +F+GEF+IL G+F+ ++ + G++ + Y L + Sbjct: 366 MSIFCTISLFFTLANMSLLGSSSFIGEFLILIGAFERNSLVATPAALGMILGAAYFLWLY 425 Query: 441 HRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQW 499 + FG K ++ ++ RE+F+ LL +V ++ +G Y + L+ ++ + N+ Q Sbjct: 426 NCVVFGNFKPNFL-KKFSDLNRREVFISLLFIVGVIWMGVYLEVFLECMYTCVSNLVQH 483 >UniRef50_Q609T5 Hydrogenase subunit n=1 Tax=Methylococcus capsulatus RepID=Q609T5_METCA Length = 748 Score = 314 bits (806), Expect = 5e-84, Method: Composition-based stats. Identities = 121/517 (23%), Positives = 205/517 (39%), Gaps = 45/517 (8%) Query: 18 WQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGI 77 W ++ LT + L +A Q F +PW + Sbjct: 92 PAVGHHRRLPHAWRRMVFALLTASGVSSLGAGLLQLHADAAVSG--QLPFGLPW-----L 144 Query: 78 SIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM-----WILGGVIGVFL 132 H+ +D LS +V+ GL + A + ++ G + + + G+ GV + Sbjct: 145 HWHVRLDTLSAFFLVVLGLGVIAAGVYGPGYTRQFAGQYSFGALGLFTGSFVAGMEGVLI 204 Query: 133 AIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILAL 192 A D +LF WE M V YFL+ AS AA + + + + +++A L Sbjct: 205 ADDAYLFVIAWEAMTVSSYFLVVYQHEHASHR----RAAFLYLLMGEVGAIAIILAFGIL 260 Query: 193 VFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAP 252 A +F ++ + ++ L F +K +VPLH WLP+AH AP Sbjct: 261 ------AAASHSFAFDAWRDAHVTPAWGTAAFLLALAGFGMKAGLVPLHAWLPEAHPAAP 314 Query: 253 TAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIK 312 S ++G++LK A YGLLRF+ L + + I + LG G A Q+D+K Sbjct: 315 AHVSGLMSGVMLKIAVYGLLRFAFDLLGDVQWYWGAIVLGLGTGSAALGILYAVVQSDLK 374 Query: 313 RLIAYTSVSHMGFVLIAIYT-----------GSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 RL+AY+S+ +MG V + + + A+ ++ H L LF+ G Sbjct: 375 RLLAYSSIENMGIVFMGLGLCMVFIGKGHVQLGLIGLVAALYHVLNHSLFKNLLFLAAGS 434 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 + + H D+ MGGL +M L L +VA G+P FV E++ + Q VI Sbjct: 435 VVHQTHRHDLEHMGGLIKRMPVTAGLFLAGSVAIAGLPPLNGFVSEWLTFQAALQAASVI 494 Query: 422 TVISTFGLV------------FASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMIL 469 +V A+ + + A+ G+ + + ++ L+ Sbjct: 495 DNGILRSMVSVAAAILAFTAAVAAACFVKLYGVAFLGQPRERRSAHAHEVSHSGMLWAPA 554 Query: 470 LLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNSVTT 506 +L L +LLG P +LD + + S + Sbjct: 555 MLAGLCLLLGVLPTWVLDAMRPITRQLLGETLTSASA 591 >UniRef50_C4LLM4 Na(+)/H(+) antiporter subunit n=3 Tax=Corynebacterium RepID=C4LLM4_CORK4 Length = 999 Score = 314 bits (805), Expect = 6e-84, Method: Composition-based stats. Identities = 108/511 (21%), Positives = 202/511 (39%), Gaps = 25/511 (4%) Query: 6 LILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQS 65 LI IP F + R + +A ++ L + W+ Sbjct: 3 LIAIPLFVVLALILVPLFVRLLDRNAGWPLALIFIASAIPLLRKL--PDIIDGNPWTWKV 60 Query: 66 EFDMPWIP-RFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF--FHLNLMW 122 + ++P + L D LS +L +G + S + + +G F+L + Sbjct: 61 TWIEDFLPNGADVIFSLRADALSTFFALLALGIGAAVFIYSTRYLHGGRGSMSFYLLMTA 120 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 + V+ + LA D+ L F WE++ + +FLIA G G + + I T G Sbjct: 121 FMAAVVTLVLADDVILMFISWELVSLASFFLIARSGPGGELG------SMRTIILTFFGG 174 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 L +L ++ V + + E + P + ++ + + K P H Sbjct: 175 LTLLTSLGISAGVTGTTSLSGIIHSPEWAHHP---TLLSVIAVLIATSACTKSAQFPFHF 231 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGA 302 WLP+A + + A ++K Y LLRFS + A + + + +G+ A Sbjct: 232 WLPEAMAADTPVSAFLHAAAVVKAGIYLLLRFSALF--HDDAWWRGLLIIVGMFTAIMAA 289 Query: 303 WMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQL 362 A + D+K+L AY++VS +G+++ I G+ LA AV+ +AH L + LF+L G + Sbjct: 290 LFALQKNDLKKLTAYSTVSQLGWIVCTIGIGTPLAMAAAVVHTLAHALFKSSLFMLIGVV 349 Query: 363 YERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ------ 416 + TRD+R +G +W KM W ++++ A + +P F+ + +L + Sbjct: 350 DHQTGTRDIRRLGPIWRKMPWTFSMAVIAATSMAAVPPLFGFISKEGMLDAMAEGELATP 409 Query: 417 VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLV 476 ++ + +T G + YS + G ++ L + L + Sbjct: 410 ATALLLICATVGAILTFAYS---YRYVFGGFVDGTRDVSDVHEAPLSLWLPAAIPGFLSL 466 Query: 477 LLGFYPQPILDTSHSAIGNIQQWFVNSVTTT 507 LGF P + +A + + T Sbjct: 467 PLGFVPGFMNSFVDAAADSALSTHHATHTHL 497 >UniRef50_B4U8I0 Proton-translocating NADH-quinone oxidoreductase, chain M n=3 Tax=Aquificaceae RepID=B4U8I0_HYDS0 Length = 501 Score = 314 bits (805), Expect = 6e-84, Method: Composition-based stats. Identities = 161/501 (32%), Positives = 266/501 (53%), Gaps = 16/501 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 L+ +L+P + L K + IA I +T +SL +S + Sbjct: 10 LISISMLVPIVTTILIIFFP---EKFTKPIAFIGSLVTFLISLYTLKFLDFS-----HLS 61 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI--EKYQGFFHLN 119 + P I GIS + +DGLS + +L+ + LA+ S K+I + ++ Sbjct: 62 NIYLYENYPIIKELGISYVVGVDGLSEVFYILSTFISFLAIAWSVKDIQIKSRLKEYYSM 121 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 + +IGVF A D+ LF+ F+E+ LVPM F+I +WG+ K R+ +A KFFIY Sbjct: 122 FLLTTTFLIGVFTAWDLILFYIFYELTLVPMIFVIGVWGY-----KLRLYSAYKFFIYIF 176 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 S L +L I+ L + TG + Y L++ + + L L FFIAFAVK P+VP Sbjct: 177 ISSLFLLFGIMILSADSFKQTGHFNAFYPTLVHLHLPLNEQIFLFLLFFIAFAVKTPLVP 236 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 H WLPDAH +APTAGSV LA ILLK +Y LRF++ LFP A+ + +++G++ I Sbjct: 237 FHTWLPDAHGEAPTAGSVVLAAILLKMGSYAFLRFNIGLFPEAAKHLWLVMVFIGILTII 296 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 Y +WM AQ +IKR +AY+SVSHMGF++ A++ + ++ +V++M AHG S+A LF++ Sbjct: 297 YASWMTIAQNNIKRFVAYSSVSHMGFIVAAMFMLNFQGFRASVLEMAAHGFSSASLFMIA 356 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP 419 G +Y R+H+ + + + G M L + +G+PG +F G+F+ + + + Sbjct: 357 GFIYNRLHSFNTKTIAGSVRYMPIFSILVALTGFSAMGLPGGSSFWGKFLTIVSAKEHSL 416 Query: 420 VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLG 479 + +I F+++Y L L + + K++ + + +L ++L LVVL+ +G Sbjct: 417 DLALIVIVSAFFSAIYMLYFLRNLFL-EGKTEGSFLIFTDIRGIKLTVMLSLVVLMFTIG 475 Query: 480 FYPQPILDTSHSAIGNIQQWF 500 +P + ++I N+ Sbjct: 476 LFPFLFFNIFDASISNMLHIV 496 >UniRef50_D0XMF8 NADH dehydrogenase (Quinone) n=3 Tax=Alphaproteobacteria RepID=D0XMF8_9CAUL Length = 992 Score = 313 bits (804), Expect = 7e-84, Method: Composition-based stats. Identities = 109/491 (22%), Positives = 201/491 (40%), Gaps = 28/491 (5%) Query: 12 IGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPW 71 IG R G A L + A + + + W Sbjct: 48 IGALAPALAIRRGRNASALAAGAVTLAALVIL---------GSFAPAVLAGEVVQARIDW 98 Query: 72 IPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEK--YQGFFHLNLMWILGGVIG 129 IP G++++L +D L L+ + +G+L ++ + + K G F + L+ G + G Sbjct: 99 IPLLGLNLNLFLDALGLMFAGMILGIGLLVIVYARFYLAKADPMGRFFVYLLLFQGAMTG 158 Query: 130 VFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAI 189 + L+ ++ L FWE+ + + LI W H + A T A GL ++ + Sbjct: 159 IVLSDNVLLLLIFWELTSLSSFLLIGFWRHLPEGRQGARMA----LAVTGAGGLSLIGGL 214 Query: 190 LALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHS 249 L L + + E + LL+LG K P H WLP A + Sbjct: 215 LILGNIAGSYDLTVILQNREAIQASPLYLPALLLILG---GCFTKSAQFPFHFWLPHAMA 271 Query: 250 QAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQ 308 APT S + ++K + L R L + + E+ + G++ + + A +A + Sbjct: 272 -APTPVSAYLHSATMVKAGIFMLARLWPVL--SGTGEWFYLVATTGLVTMVFAAVVALFK 328 Query: 309 TDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHT 368 D+K L+AY+++SH+GF+ + G+ +A V ++ H A LF+ G + T Sbjct: 329 DDLKGLLAYSTISHLGFLTMLFGFGTPMAAVVGVFHILNHATFKAALFMNAGIVDHEAGT 388 Query: 369 RDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV-----ITV 423 RD++ +GGL + M L++ ++ G+P F+ + M+L + V + Sbjct: 389 RDIKRLGGLATLMPIAATLAVVAGLSMAGIPPLNGFISKEMMLEEASHTVWWSQPWLVPA 448 Query: 424 ISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQ 483 ++T G F+ YS + YFG ++ + + +LV L+V +G +P Sbjct: 449 LATLGATFSVAYSFRYIVHVYFGTTRTDY-PKTPHDPGIGLWGPPAVLVGLVVAIGLFPA 507 Query: 484 PILDTSHSAIG 494 + A+ Sbjct: 508 VVAGPLVEAVS 518 >UniRef50_C9RWL8 Proton-translocating NADH-quinone oxidoreductase, chain M n=7 Tax=Geobacillus RepID=C9RWL8_GEOSY Length = 525 Score = 313 bits (804), Expect = 7e-84, Method: Composition-based stats. Identities = 169/530 (31%), Positives = 253/530 (47%), Gaps = 34/530 (6%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQS--A 58 M L L+ P +G L + ++ +W+ L L+L ++Q G Sbjct: 2 MFLSLLVFSPLLGIMLLMFVRKTDERMIQWLGTAATVPPLILALFAFIQSGRGFRLERLD 61 Query: 59 GIPQWQSEFDMPWI--PRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFF 116 W D+P++ + I L IDGLSL+ +VLT +L LA L S ++ + + Sbjct: 62 EARDWVRLTDLPFLTDAAYVIRYELGIDGLSLVFIVLTAVLATLAALASM-LVKTEKKGY 120 Query: 117 HLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFI 176 L L+ + G++GVF A + FF F E+ LV M+ L+ WG G R AA + + Sbjct: 121 FLWLLALEIGMLGVFSAANFVWFFLFLEVTLVAMFLLVGKWG-----GFERERAAYSYLL 175 Query: 177 YTQASGLVMLIAILALVFVHYNATGVWTFNYEE------LLNTPMSSGVEYLLMLGFFIA 230 Y ++L+ I L+ A L P+++ L+ G +A Sbjct: 176 YNGLGSALLLVVIAVLLARTGTANFALLHEMLHNPAAEGQLIAPLTAEGRRWLLGGLLLA 235 Query: 231 FAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIA 290 FAVK+P VP H WL H +AP + AG+LLK AAYG++RF + LFP+ FA + Sbjct: 236 FAVKLPAVPFHRWLIRVHVEAPPPVVMLHAGVLLKIAAYGMIRFGVGLFPDEFRSFAGVL 295 Query: 291 MWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGL 350 GVI + YGA +A Q ++KR++AY+SVSHMG VLI + ++ QGAV Q +AHGL Sbjct: 296 ALFGVINVLYGALLALRQRELKRVLAYSSVSHMGVVLIGLGALNEAGIQGAVFQSVAHGL 355 Query: 351 SAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMI 410 +A F+L G L R+ T D+ GGL M L A+A LG+PG FVGEF Sbjct: 356 ISALSFLLVGVLAHRMGTTDINRFGGLTKAMPLFSGYLLTAALALLGLPGLAGFVGEFTS 415 Query: 411 LFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIAS---------------- 454 G FQ P + + GL+FA+VYSL + FG+ + Q + Sbjct: 416 FLGLFQTKPALAAVGALGLIFAAVYSLKAVLDITFGRPRDQREAVMGWREPQASAASLGE 475 Query: 455 --QELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVN 502 + + +E +LV L+V +G YPQ + + + + Sbjct: 476 PQGGVVDLQGKEAVPAFILVALIVAVGVYPQLLAAPLTAVVKTMMNGLGG 525 >UniRef50_B4SLF9 NADH dehydrogenase (Quinone) n=20 Tax=cellular organisms RepID=B4SLF9_STRM5 Length = 943 Score = 313 bits (804), Expect = 8e-84, Method: Composition-based stats. Identities = 108/494 (21%), Positives = 189/494 (38%), Gaps = 32/494 (6%) Query: 13 GGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWI 72 R W+A + LA+ L +PW+ Sbjct: 15 MAVAVAAFPRSSRSTAAWLAALAPLGGLAILGWLTPSVLDGQV---------VRTMVPWL 65 Query: 73 PRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI--EKYQGFFHLNLMWILGGVIGV 130 P+ G+ L +DGL+ + L +G L VL + + + F+ L+ +G ++G+ Sbjct: 66 PQIGLDFTLRLDGLAWMFAGLVLGIGALVVLYARYYLSSQDNAHRFYTYLLLFMGAMLGM 125 Query: 131 FLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAIL 190 ++ ++ L FWEM + + LI W H+ + A +A+L Sbjct: 126 VVSGNLLLLMIFWEMTSISSFLLIGFWSHRQDAREGARMA--------LVITGGGGLALL 177 Query: 191 ALVFVHYNATGVWTFNYEELLNTPM-SSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHS 249 V + G + + + +S + + K P H WLP A + Sbjct: 178 GGVLLIGRIVGSFDLDVVLAAGEQIRASALYPYALFLVLAGIFTKSAQFPFHFWLPHAMA 237 Query: 250 QAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQ 308 APT S + ++K + L R L S F +G + + GAW A Q Sbjct: 238 -APTPVSAYLHSATMVKAGVFLLARLHPAL--AGSDLFFYTVSGIGALTLLIGAWNAIFQ 294 Query: 309 TDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHT 368 D+K L+AY+++SH+G + + + +A V ++ H A LF+ G + T Sbjct: 295 HDLKGLLAYSTISHLGLITLLFGLSTPMAVVAGVFHILNHATFKASLFMAAGIIDHETGT 354 Query: 369 RDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVV-------PVI 421 RDMR +GGL M + AL++ ++A G+P F+ + M+ + + Sbjct: 355 RDMRKLGGLRRLMPFTSALAIIASLAMAGIPLLNGFLSKEMLFAEALTAGGGPGAMRTAV 414 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 ++ + VF YSL +H +FG + + LLVV+ V +G Sbjct: 415 SIAALLAGVFGVAYSLRFVHDTFFGPGPHDLDRVP-HEPPRWMKVPVELLVVICVAVGIA 473 Query: 482 PQPILDTSHSAIGN 495 P + A Sbjct: 474 PALTVAPVLHAAAA 487 >UniRef50_Q950R4 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Spizellomyces punctatus RepID=Q950R4_SPIPN Length = 470 Score = 313 bits (804), Expect = 9e-84, Method: Composition-based stats. Identities = 162/496 (32%), Positives = 258/496 (52%), Gaps = 28/496 (5%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L L+LIP + W + +V + AL + LA +L + S Sbjct: 1 MLEILLLIPALSIVTVWLYCKVAQEVV-FTALAFSIINLAHTLLIVHFFDGSTAAFQFQS 59 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 IDG+SL ++ LT +L + +L SWK + F + L+ Sbjct: 60 LGI----------------FGIDGISLWLIFLTNMLMPIVILSSWKAVNIMVKPFIILLL 103 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 I VF+ +D+ LF+ +E +L+PM+FLI +G +I AA +FF+YT Sbjct: 104 LIGFWSNAVFMVLDLLLFYISFEGVLIPMFFLIGFYG----GRNRKIHAAYQFFLYTLFG 159 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 L++ +A++ L T +Y+ LL P+S +Y+L L FFI+ A+K+P++P+H Sbjct: 160 SLLLFLALIVLYLE------TGTTDYQVLLTIPISQNRQYILWLAFFISLAIKIPMIPVH 213 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLP+AH +APTA SV LA ILLK +YG LR+ +PLFP+ S F P+ + ++ I Y Sbjct: 214 IWLPEAHVEAPTAASVILAAILLKLGSYGFLRYVIPLFPDGSTYFTPLVCTMCILAIIYS 273 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 + AQ D K++IAY+S+ HM IA++T V +I+HGL ++ LF+L G Sbjct: 274 SVACLAQVDAKKIIAYSSIGHMNTATIALFTNDYHGLSAGVYFLISHGLISSALFLLIGV 333 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 LY+R HTR ++ GL M L L F++A + +PGT F+ EF+ G+ + P I Sbjct: 334 LYDRYHTRTIKYYRGLVMIMPVFTVLFLIFSLANVAVPGTSGFISEFLTFLGALNLNPFI 393 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 V ++ +V A Y+L HR +G + + S ++ +EL ++L L+ L G Y Sbjct: 394 AVSASIAIVLAPAYALWFFHRVSYGSFSTYLPSL-YQDVTAKELHLLLPLLFFTFLFGIY 452 Query: 482 PQPILDTSHSAIGNIQ 497 PQ I + H + ++ Sbjct: 453 PQLIFEPLHMSCLSLL 468 >UniRef50_UPI00005100B6 putative monovalent cation/H+ antiporter subunit A n=1 Tax=Brevibacterium linens BL2 RepID=UPI00005100B6 Length = 1024 Score = 313 bits (803), Expect = 9e-84, Method: Composition-based stats. Identities = 104/502 (20%), Positives = 195/502 (38%), Gaps = 31/502 (6%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 M+L + L I + R + W L + L + G ++ T + + Sbjct: 1 MILTVVALAALI--IVTPFITRVLGRASGW---------LLAAAYLGIAGLFTPTAAEVM 49 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEK-YQGFFHLN 119 E WIP FG+ + L DG+ ++ + ++G + + S +++ F+ Sbjct: 50 AGSTPEVSYQWIPAFGVDLALRADGIGVIFTYIALIIGAVVFVYSTGYLDRGRNTSFYWL 109 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 ++ ++ + L+ D+ + F WE+ + +FLIA G A + T Sbjct: 110 MVIFTFSMVMLVLSNDLLVLFVCWELTSLASFFLIARSGSPGQAP------ALRTMFITF 163 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 GL +L+A ++ V + S V L+ + +A K P Sbjct: 164 IGGLSLLVATGVIIAVTGTTNVHEALSSPVWSAQ---SPVTSLVAVLIAVAAMTKSAQFP 220 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 H WLPDA + A + A ++K + LLRF+ +A+ + + + G+I Sbjct: 221 FHSWLPDAMAAATPVSAYLHAAAVVKAGIFLLLRFTPAF--HATPAWNTLLIVAGLITAC 278 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 G W A Q D+K+L+AY++VS +G + I GS+ A A + +IAH L +GLF++ Sbjct: 279 IGGWFALNQYDVKKLMAYSTVSQLGLITAVIGIGSEAAIAAATLHVIAHALFKSGLFMMV 338 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILF------G 413 G + TR++ + L + + + G+P FV + + G Sbjct: 339 GVVDHLAGTRELTRIPQLMRAAPASFIVMIVGCASMSGIPPLLGFVSKEALFTAFGDTPG 398 Query: 414 SFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVV 473 S +++ V Y + A+ + L S L + ++ Sbjct: 399 SAWTGWAALLVAVGASVLTFAYCAKTVWGAFI--DGKPVDRARLGHGSPVMLIAAAVPIL 456 Query: 474 LLVLLGFYPQPILDTSHSAIGN 495 + L F + A+ Sbjct: 457 ASIPLSFALFVFDNPISQAVRA 478 >UniRef50_C5A2R1 Formate hydrogenlyase II subunit D (Mhy2D) n=1 Tax=Thermococcus gammatolerans EJ3 RepID=C5A2R1_THEGJ Length = 694 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 117/511 (22%), Positives = 202/511 (39%), Gaps = 46/511 (9%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 L +++ I + + T +L SL + Sbjct: 6 LFTLTVILYLISILAVLPLRKNYRASITVGHVFTGLASL--SLLAFTVSVLPEALKGKAI 63 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF-----F 116 ++ + + IP +DGLSL++ ++ G LG+ + S K +E Y+ F + Sbjct: 64 EFTYDLGVAKIP-------FHVDGLSLILCLVLGSLGLATSIYSPKYMEFYERFGRGWLY 116 Query: 117 HLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFI 176 + + ++ + + F FFWE+M Y L+ + K A K+F+ Sbjct: 117 VVLYSTFVLSMVLIVTTSNFLWFVFFWEVMTFTSYLLMVWENDEEYVRK----AGWKYFV 172 Query: 177 YTQASG-LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKM 235 + L +++A+ L + G N++ L + + L F + F K Sbjct: 173 TMHVASTLPLIVALALLYAKAGSIEG---LNFDNLSKLHLGP----IYYLLFLVGFGSKA 225 Query: 236 PVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGV 295 VVPLH WLPDAH AP+ S L+G ++K A YGL+R + + + F I LG Sbjct: 226 GVVPLHFWLPDAHPAAPSNVSALLSGAMIKVAVYGLIRTTCFILG-LNETFGYIVAILGT 284 Query: 296 IGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGA-------------V 342 + + G A QTD KRL+AY SV MG++ + + G L +G + Sbjct: 285 VTLTVGTLYALKQTDAKRLLAYHSVGQMGYIWLGVGAGIALMAKGGSYAAFGAIAMAAGL 344 Query: 343 IQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTG 402 ++ H + LF+ G + R HTR++ ++GGL M + A++ G P Sbjct: 345 YHLVNHAIFKGLLFLSAGSVLYRTHTRELNVLGGLAKLMPLTALFTFIAAMSIAGEPPFN 404 Query: 403 NFVGEFMILFGSFQVVPVITVISTFGLVF----ASVYSLAMLHRAYFGKAKSQIASQELP 458 F+ ++MI G+F + V +F + A+ G ++ Sbjct: 405 GFMSKWMIYQGTFLSGDGLLVFCGVMALFISAATLASFVKFYTTAFGGVPTK--VTENAE 462 Query: 459 GMSLRELFMILLLVVLLVLLGFYPQPILDTS 489 + L L L +L G P I+ Sbjct: 463 EVPSSMLVGKGFLAALCLLFGLIPSSIIPLL 493 >UniRef50_C6V5H6 NADH-quinone oxidoreductase chain m n=2 Tax=Neorickettsia RepID=C6V5H6_NEORI Length = 471 Score = 313 bits (802), Expect = 1e-83, Method: Composition-based stats. Identities = 149/412 (36%), Positives = 233/412 (56%), Gaps = 16/412 (3%) Query: 79 IHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFL 138 I L D LS +M++LT LL +L V+ + + + L + + FLA D+ Sbjct: 76 ITLKADELSCVMLLLTSLLTMLCVIMA----KDKSPGYFGLLFLLEFVLAVFFLATDLLT 131 Query: 139 FFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYN 198 F+ +E+ L+P++F+I LWG GK R+ AA K F+YT + LI+IL L Sbjct: 132 FYITFELSLIPIFFIIGLWG-----GKKRVYAAFKIFLYTLFGSVGFLISILYLFAELGT 186 Query: 199 ATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVD 258 + L+ + + L+ + FF+AFAVK+P+ PLH WLPDAH QAPT GSV Sbjct: 187 LEIS---SLVYLVENTIPIAAQKLIWIAFFLAFAVKIPMFPLHTWLPDAHVQAPTEGSVM 243 Query: 259 LAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYT 318 LAG+L+K YG+L+ LP+FP+ S EF+ + + L I + Y + +A AQTDIK+LIAY+ Sbjct: 244 LAGVLIKLGTYGMLKVLLPIFPSLSREFSTLVLSLSAIAVIYTSLVALAQTDIKKLIAYS 303 Query: 319 SVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLW 378 S++HMG V ++ + Y+GAV QM++HGL ++GLF G +Y+R TR + G+ Sbjct: 304 SIAHMGIVTAGLFAFNIEGYKGAVFQMVSHGLVSSGLFFCIGSIYDRSATRQIADHSGIM 363 Query: 379 SKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLA 438 + L + F++A +G+PGT FVGEF+ L G FQ ++ G+V + Y L Sbjct: 364 NFAPKLGFAFVLFSLAAIGLPGTAGFVGEFLALTGLFQSRETFAILCATGVVLGACYMLY 423 Query: 439 MLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSH 490 + R +G + +I + L E ++ L++L++ LG +P +L+ Sbjct: 424 LCKRIIWGTPEGKI----FRDIHLHESIPLITLIILVMFLGLHPSLLLNFLR 471 >UniRef50_A6TVL4 NADH dehydrogenase (Quinone) n=2 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TVL4_ALKMQ Length = 694 Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats. Identities = 130/514 (25%), Positives = 224/514 (43%), Gaps = 55/514 (10%) Query: 4 PWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQW 63 +I+IP +GG + + + + T +TL L L ++ Q Sbjct: 91 LLVIMIPLVGGPIEAYIGKKSENLRDMAVVDTTFVTLLLVLAMYPQVAQGEMY------- 143 Query: 64 QSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI--EKYQGFFHLNLM 121 G + +D LS +M G+L L + + + E ++ F+L + Sbjct: 144 -----YHLPKLLGYGLSFKVDMLSFIMAATAGVLWFLVSIYAHDYMGIENHRNRFYLWMS 198 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 GG++G +A D+F F F+E+M YFL+A + K I A + A Sbjct: 199 VTFGGILGTVMAGDLFTMFLFFEIMTFSSYFLVA-----HNQSKESILAGNSYIYMGVAG 253 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIA-FAVKMPVVPL 240 GL +L+ ++ L T + L + G LM G F+ F +K ++PL Sbjct: 254 GLSILLGMILLYAY------TGTLEFIPLASEIKDLGWVKYLMTGLFVGGFGIKAGMLPL 307 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLF--------------PNASAEF 286 H WLP AH APT S L+GIL+K AYG+LR S+ F S + Sbjct: 308 HIWLPKAHPVAPTPASALLSGILIKVGAYGILRVSISFFVPSITEISGYADSLWEVSQKL 367 Query: 287 APIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAV---- 342 + +W+G+I + G +MA Q+++K+++AY S+S MG++++ I + L Y+GA+ Sbjct: 368 GAVIIWIGIITMVVGVFMALQQSNMKKMLAYHSISQMGYIVMGIGVATYLGYKGAMGFSG 427 Query: 343 --IQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPG 400 M+ H L A LF++ G +Y R H DM +GG+W KM + L + A+ GMPG Sbjct: 428 GIYHMVNHALFKALLFMVVGLVYLRTHELDMYKLGGMWRKMPFTAFLCIIAALGITGMPG 487 Query: 401 TGNFVGEFMILFGSFQVV-------PVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIA 453 F + ++ + +I T + + + GK + Sbjct: 488 FNGFASKSILHHAIIEAYEYGHPSFRYAEMIFTVVSAGTVCSFIKLFSFVFLGKCPEKY- 546 Query: 454 SQELPGMSLRELFMILLLVVLLVLLGFYPQPILD 487 +++ G + L ++++ +G P ++D Sbjct: 547 -KDIEGEKGMMDLAMGGLALMIIAVGQVPNFMMD 579 >UniRef50_C0YTV8 NADH dehydrogenase I chain L n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YTV8_9FLAO Length = 637 Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats. Identities = 111/484 (22%), Positives = 199/484 (41%), Gaps = 21/484 (4%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVK-VPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 L+ ++L+P +G + + K + +A + + +++ L++ S Sbjct: 4 LVYAIVLLPLLGFLINGLFGKNLPKILVGSLATAVVFGSFCIAVSLFMNFN-----SESQ 58 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF--FHL 118 P F+ + I+ ID LSL+MV++ +G L L S + +GF F Sbjct: 59 PVIVKAFEWFRVNGVQINFGFQIDQLSLMMVMIITGIGSLIHLYSIGYMSHDKGFYKFFT 118 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 L + ++ + + + + F WE + + Y LI W GK AA K FI Sbjct: 119 YLNLFIFSMLLLVMGSNYLILFIGWEGVGLCSYLLIGFWYTNEEYGK----AARKAFIMN 174 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 + L +LI I + + E + V + FI K V Sbjct: 175 RIGDLALLIGIFMIASQTNAVDYLSV--AENASKFELDGTVIIFITASLFIGATGKSAQV 232 Query: 239 PLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 PL+ WLPDA + ++ A ++ Y ++R + + + +++G + Sbjct: 233 PLYTWLPDAMAGPTPVSALIHAATMVTAGIYLVVRSNFLF--TLAPTVQGVILFIGFLTA 290 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFIL 358 + A Q DIK+++AY++VS +GF+ IA+ G AY A+ ++ H A LF+ Sbjct: 291 ALAGFYALRQNDIKKVLAYSTVSQLGFMFIALGLG---AYTTAMFHVMTHAFFKALLFLG 347 Query: 359 CGQLYER-IHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV 417 G + + +DMR MGGL + A L +A G P + + IL +F Sbjct: 348 AGSVIHAMSNEQDMRFMGGLKKYIPLTHATFLIGTLAISGFPLLSGMISKDEILVAAFAK 407 Query: 418 VPVITVISTFGLVFASVYSLAMLHRAYFGKAK-SQIASQELPGMSLRELFMILLLVVLLV 476 PV VI + Y + + + G+ + ++ L +++L VL V Sbjct: 408 NPVYWVILFVLAAITATYMFRLYYLTFHGEFRGTEEQKHHLHESPSNMTLPLIVLAVLSV 467 Query: 477 LLGF 480 + GF Sbjct: 468 IGGF 471 >UniRef50_Q8R9B0 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit n=2 Tax=Thermoanaerobacteraceae RepID=Q8R9B0_THETN Length = 673 Score = 311 bits (798), Expect = 3e-83, Method: Composition-based stats. Identities = 112/532 (21%), Positives = 203/532 (38%), Gaps = 47/532 (8%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 L I + +G + R G IA G T L+ + + Sbjct: 7 LFLLSIFLYVVGALISLGLNRDGK-----IANYVSGTTAFLAGCTGVASAVPVLIEGKGF 61 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF----FH 117 + +P+ + +D LS M ++ LL + + S E+Y G Sbjct: 62 ILEGMEFIPFG-----RFTINVDPLSAFMTLVISLLSIATGVYSISYQEEYIGKGTGVMG 116 Query: 118 LNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIY 177 + +I V + + F F FWE+M + YFL+ + + I A +F+ Sbjct: 117 FLNNIFIVSMILVVTSDNAFYFLVFWELMTLVSYFLVCF----EQENREAIKAGFVYFVM 172 Query: 178 TQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPV 237 ++++I+ + TF++ N +S ++ L L F+ F VK + Sbjct: 173 AHVGTVLIMISFILFYVY------TGTFDFAAFRNANLSPVIKNLAFLLAFLGFGVKAGI 226 Query: 238 VPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 VP H WLP AH AP+ S ++G+++KTA YG++R + A+ + + G I Sbjct: 227 VPFHFWLPQAHPAAPSNVSALMSGVMIKTAIYGIIRVGVDFLGAATWWWGLTVLAFGAIS 286 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTG-----------SQLAYQGAVIQMI 346 +G A ++ D+KRL+AY+S+ ++G +L+ + G L + +I Sbjct: 287 AVFGVLYAVSENDLKRLLAYSSIENVGIILMGVGAGMMGIATGYVSVGILGILAGLYHLI 346 Query: 347 AHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVG 406 H + LF+ G + R+HTR+M MGGL M W A++ +P FV Sbjct: 347 NHAVFKGLLFLGAGSVVYRLHTRNMEEMGGLARYMPWTGLTFFIGALSISALPPLNGFVS 406 Query: 407 EFMILFGSFQVV-----------PVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQ 455 ++ F V P+ V S+ + + G + Sbjct: 407 KWFTYHTLFAVSTKGSVLIRMAFPLAAVALALTGALTSLCFVKAYGVTFTGPFRGG-NEL 465 Query: 456 ELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNSVTTT 507 ++ + + L + LL + +LG + + V+ Sbjct: 466 KIKEVPVTMLIGMGLLAIGCFVLGLGAPVGAGYIANVASALLHVSSPKVSDG 517 >UniRef50_C8NJU8 NADH ubiquinone oxidoreductase subunit 5 (Chain L)/multisubunit Na+/H+ antiporter, A subunit n=16 Tax=Corynebacterineae RepID=C8NJU8_COREF Length = 1018 Score = 311 bits (797), Expect = 5e-83, Method: Composition-based stats. Identities = 107/522 (20%), Positives = 202/522 (38%), Gaps = 36/522 (6%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L + + F G +AL+ ++ Y Q Sbjct: 1 MLILFLALTAAAVFAPLLIRTLGRPAFGLLALVPAAGFFWVA--------YEFIQGTFRD 52 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLN-- 119 + W+P ++I + +D L+ L ++ +G L +L W + G Sbjct: 53 GGELLLHYDWMPSVHLNITMRLDSLAALFSLIILGVGALVLLYCWGYFDSNPGRLSAFGG 112 Query: 120 -LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 L+ + G+ ++ ++ L + FWE+ V + L+ +G +AS ++ A + T Sbjct: 113 QLVGFAMAMYGLVISDNILLMYVFWEITSVLSFLLVGYYGERASSRRSAGQA----LMVT 168 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 GL ML+ I+ + + + L K + Sbjct: 169 TLGGLAMLVGIILIGVQTGVWYFS---DVPAFEGNWADVPYISIGALLILAGALSKSAIA 225 Query: 239 PLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 P H WLP A + APT S + ++K Y + R + N + + I + LG+ Sbjct: 226 PTHFWLPGAMA-APTPVSAYLHSAAMVKAGIYLVARLAPDF--NVVSSWYLITLPLGIFT 282 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 + WMA Q D+K ++AY +VS +GF++ G++ A + +H L A LF+ Sbjct: 283 MIMSGWMALRQKDLKLILAYGTVSQLGFIISVAGIGTREALLAGLALTFSHSLFKATLFM 342 Query: 358 LCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFM-----ILF 412 + G + TRD+ + GLW + + AL+ A + G+P F+ + + Sbjct: 343 VVGAIDHTTGTRDINQLSGLWRRQPLMFALAAISAASMAGIPPLFGFIAKETAIDSVLYE 402 Query: 413 GSFQVVP--VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQ-------ELPGMSLR 463 G + +P ++ G +F YSL L+ A+ K + + E ++ + Sbjct: 403 GMLRGMPGNLMLAGIILGSIFTMAYSLYFLYGAFATKRQLFPRNNGVSTAVAESHPVAFK 462 Query: 464 ELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNSVT 505 +L L VLLG +P P+ + + N+ + Sbjct: 463 LWIAPFILTSLTVLLGLFPAPLSAPIVTHLDNVTPGEPTYLA 504 >UniRef50_A9A3Z6 Proton-translocating NADH-quinone oxidoreductase, chain M n=4 Tax=Thaumarchaeota RepID=A9A3Z6_NITMS Length = 517 Score = 310 bits (795), Expect = 8e-83, Method: Composition-based stats. Identities = 127/538 (23%), Positives = 222/538 (41%), Gaps = 70/538 (13%) Query: 3 LPWLILIPFIGGFLCWQTERF-GVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 L + +P + + + R G W + T L + L G Sbjct: 5 LLQAVFLPLLLSPIAYILGRKVGPTPAMWFTFAILLYTTILVVNAALSGT---------- 54 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKY--------- 112 E PW +FG +DGL+ ++ +L + VL S + Sbjct: 55 ---VEEHYPWTEQFG-EFGFLLDGLASPFAIIIYVLSTILVLYSKPYMIHKFHEQFEEEQ 110 Query: 113 -------------------------QGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMML 147 G + + G++G ++ ++ F+ F+E+ML Sbjct: 111 KINPSSSGQSSVVESSALSNYVNAKSGLYFALYLVFAMGMLGTVMSTNLIEFYIFFEVML 170 Query: 148 VPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNY 207 +P +FL+ALWG R F +T A +V+L+ L + + +F++ Sbjct: 171 IPGFFLVALWGDGP-----RRKIGLMFLFWTHAGAVVLLLGFLMIGLT------IGSFDF 219 Query: 208 EELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTA 267 ++ + + V + + I VK+ V H WLP H APT S L+ ++ Sbjct: 220 ADIKESEIPQDVVMISAIAIAIGLGVKLAVFMFHVWLPYVHGSAPTPISALLSPAMIGIG 279 Query: 268 AYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVL 327 AYG+ R + P+ AE + G++ + YG MA Q D+KRL+AY+S+S MG++L Sbjct: 280 AYGVFRLIVEFLPSTFAELSIWFHIWGLVTMLYGGAMALMQDDLKRLLAYSSISQMGYLL 339 Query: 328 IAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPAL 387 I + S + GA + I HGL LF++ G + ++ TR + +GGL KM Sbjct: 340 FGIGSMSAMGLAGAEMMYITHGLGKGILFMMAGIIIVKVGTRSISKLGGLAGKMPITAVC 399 Query: 388 SLFFAVATLGMPGTGNFVGEFMILFGSFQVVP--------VITVISTFGLVFASVYSLAM 439 ++ A+ +G+P T F+GE+++ +G+ + V + Y L M Sbjct: 400 AVIGALTIMGVPPTSGFMGEWILFYGALETAIEEGSTLRAVTFGLGLVATALTMAYMLWM 459 Query: 440 LHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQ 497 L R +FGK + +++ S +++L V+LG YP L T + + Sbjct: 460 LKRVFFGKTPEHL--EKVKEGSWYMTAPMMVLAGFTVVLGIYPDIFLKTILPYMNGVL 515 >UniRef50_Q67NV3 Na+/H+ antiporter subunit n=1 Tax=Symbiobacterium thermophilum RepID=Q67NV3_SYMTH Length = 754 Score = 310 bits (794), Expect = 1e-82, Method: Composition-based stats. Identities = 105/465 (22%), Positives = 198/465 (42%), Gaps = 18/465 (3%) Query: 44 LQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVL 103 L + ++T + + +PW+P+ GI + + +DG L +L +G L VL Sbjct: 13 LGVAATAVAAVTFVLVVLTPEMSLVIPWVPQLGIDLSIHVDGWGRLFALLIAGIGTLVVL 72 Query: 104 CSWKEI--EKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKA 161 S + + G F+ L+ +G ++GV A ++ L + FWE+ + + LI W Sbjct: 73 YSIPYLGAREDLGKFYAYLLLFMGAMLGVVYAGNLMLMYVFWELTSISSFLLIGFW---- 128 Query: 162 SDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEY 221 + A K + T GL ML + L V + + Sbjct: 129 NTRDDAQYGALKAILITFGGGLCMLGGLAILGTVGGTFELS---ALLAKQAELLGHPLVT 185 Query: 222 LLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFP 280 + ++ I K P H WLPDA + APT S + ++K Y + R Sbjct: 186 VALVLLLIGAFTKSAQFPFHIWLPDAMA-APTPVSAYLHSATMVKAGLYLIGRLWPIF-- 242 Query: 281 NASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQG 340 + + P+ +G++ + G+++A +TD+K ++A +++S +G ++ G+ A Q Sbjct: 243 HTHPLWVPVVAAVGMVTMVVGSFLAVQKTDLKAVLALSTISQLGLIMWLFGLGTPEATQA 302 Query: 341 AVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPG 400 A ++ H A LF++ G + + TR++ ++ GL M L++ A + G+P Sbjct: 303 AAFHLLNHSTFKALLFMVVGIIDHQTGTREIPLLSGLRRAMPVSAGLAMVGAASMAGVPL 362 Query: 401 TGNFVGEFMILFGSFQVVPVI--TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELP 458 F+ + M L +++T + ++Y L + H+ +FG+ E Sbjct: 363 LNGFLSKEMFLTAVHGSSMGAAGALVATGASLLTTLYCLILGHKIWFGEPHETPDVPE-- 420 Query: 459 GMSLRELFMILLLVVLLVLLGFYPQPILDTS-HSAIGNIQQWFVN 502 S L LLL V++V +G YP + A+ + Q + Sbjct: 421 EGSPSILVPPLLLAVIIVAVGIYPGLVESAIVTPAVAAVLQGPAD 465 >UniRef50_Q9RVZ0 NADH-ubiquinone/plastoquinone subunit, putative n=1 Tax=Deinococcus radiodurans RepID=Q9RVZ0_DEIRA Length = 814 Score = 309 bits (793), Expect = 1e-82, Method: Composition-based stats. Identities = 109/493 (22%), Positives = 194/493 (39%), Gaps = 34/493 (6%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 + +L PF+ +C + + A LAL +L+ Sbjct: 1 MTLAVLFPFLMAAVCALLGPQLGRRTGYFAAAGFLPALALIPRLFAL----------PAA 50 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIE--KYQGFFHLNL 120 W+P G+++ DG SLL L G++G LA L S + + G F+ L Sbjct: 51 APVSEVTRWVPELGLNLVFRGDGFSLLFAALIGVIGTLATLYSVAYLSAGEKFGRFYPYL 110 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + G ++G+ L+ ++ F FWEM V + LI LW +++ + A Sbjct: 111 LCFGGSMLGLVLSDNLVALFGFWEMTSVTSFLLIGLWHTRSAARDGAVKA--------FL 162 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 + + +LA + A G + +L S + +L +A K +P Sbjct: 163 ISALGGLGLLAAAAMLSIAGGSPNLSQLDLGAVRASP-LFVPALLCTLLAAFTKSAQLPF 221 Query: 241 HGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 H WLP A +APT S + ++K + +F L SA ++ I + LG++ + Sbjct: 222 HIWLPTAM-EAPTPISAFLHSATMVKAGVVLVAKFGLIF--GTSALWSGITVPLGLLTMV 278 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 +G+W+A QTD+K L+AY++VS +G ++ A ++ H A LF + Sbjct: 279 WGSWLALRQTDLKALLAYSTVSQLGLLMSLYGLADAGGRFAATAHLLNHAAFKAALFFVV 338 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP 419 G + TR + + L +M ++L A++ G+P G FV + + + P Sbjct: 339 GIIDHETGTRQIPYLQNLRRQMPVTFVIALLAALSMAGLPPLGGFVSKELFYENMLRAGP 398 Query: 420 VITVISTFGLVFASVYSLAMLHRAY---------FGKAKSQIASQELPGMSLRELFMILL 470 ++ G YS +L + + + + L L Sbjct: 399 GFIAVAVLGSALTLAYSARLLSIFFAPRSGLTPTRRELRQDALKAHVHEAPLGLTLPAGL 458 Query: 471 LVVLLVLLGFYPQ 483 L +L G +P Sbjct: 459 LAGTALLFGLWPH 471 >UniRef50_P26288 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic n=371 Tax=Viridiplantae RepID=NU4C_ARATH Length = 500 Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats. Identities = 164/505 (32%), Positives = 262/505 (51%), Gaps = 21/505 (4%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L +++ P G L G KV +W + L L L+ + P Sbjct: 7 LTIIVVFPISAGSLMLFLPHRGNKVNKWYTICICILELLLTTYAF-----CYNFKMDDPL 61 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMW 122 Q D WI F + IDGLS+ ++LTG + LA L ++ + + FFH ++ Sbjct: 62 IQLSEDYKWIDFFDFYWRMGIDGLSIGTILLTGFITTLATLAAFP-VTRDSRFFHFLMLA 120 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 + G IG F + D+ LFF WE+ L+P+Y L+++WG GK R+ +ATKF +YT S Sbjct: 121 MYSGQIGSFSSRDLLLFFIMWELELIPVYLLLSMWG-----GKKRLYSATKFILYTAGSS 175 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 + +LI +L + N T N E L N +E L +GF IAFAVK P++PLH Sbjct: 176 IFLLIGVLGISLYGSNE---PTLNLELLANKSYPVTLEILFYIGFLIAFAVKSPIIPLHT 232 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGA 302 WLPD H +A + + LAGILLK AYGL+R ++ L P+A + F+P + +G I I Y A Sbjct: 233 WLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSMFSPWLLVVGTIQIIYAA 292 Query: 303 WMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQL 362 + Q ++K+ IAY+SVSHMGF++I I + + GA++Q+I+HG A LF L G Sbjct: 293 STSPGQRNLKKRIAYSSVSHMGFIIIGISSITDPGLNGAILQIISHGFIGAALFFLAGTS 352 Query: 363 YERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVIT 422 Y+RI + MGG+ + + + ++A+L +PG F+ EF++ FG Sbjct: 353 YDRIRLVYLDEMGGMAISIPKIFTMFTILSMASLALPGMSGFIAEFIVFFGIITSQKYFL 412 Query: 423 V-------ISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLL 475 + + G++ +Y L+ML + ++G I + RELF+ + +++ + Sbjct: 413 ISKIFIIFVMAIGMILTPIYLLSMLRQMFYGYKLINIKNFSFFDSGPRELFLSISILLPI 472 Query: 476 VLLGFYPQPILDTSHSAIGNIQQWF 500 + +G YP +L + + +I + Sbjct: 473 IGIGIYPDFVLSLASDKVESILSNY 497 >UniRef50_B6YTY8 Membrane bound hydrogenase, MbhH subunit n=9 Tax=Thermococcaceae RepID=B6YTY8_THEON Length = 532 Score = 308 bits (791), Expect = 3e-82, Method: Composition-based stats. Identities = 118/525 (22%), Positives = 223/525 (42%), Gaps = 39/525 (7%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +LP+LI+IP G F G K A++ LT +S ++ + Sbjct: 6 ILPYLIIIPLFGAFAMPIVNLAGKKAREAWAVLISALTFIVSSVIFYHIWNTGEIIVYTL 65 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF--FHLN 119 ++ F F I I +D +MV + + ++AV+ S ++ G ++ Sbjct: 66 GAETPFGQG--VDFPIRIVWEVDLFGAIMVFIVAFVSLMAVIYSIGYMKHDTGLDKYYTL 123 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 ++ + G++G+ + D+F F+ F E+M + Y L+A +D I A K+ Sbjct: 124 ILILELGMLGIAITGDLFNFYVFLEIMSIASYALVAF----RNDTWEGIEAGIKYMFVGS 179 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 + +L+ I L + G T Y + + + + F K P Sbjct: 180 IASAFVLLGIALLYGQY----GTLTMGYLAVKIVQNPTVTAKVALALFIAGLLFKSGASP 235 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAA-YGLLRFSLPLFPNASAEF------------ 286 +H WL DAH AP++ S L+G+++K Y + R ++ + Sbjct: 236 VHMWLADAHPAAPSSISAMLSGLVIKIGGIYAIARILFSIYTPMAHSIVLEAYLQPHINM 295 Query: 287 ---APIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTG--------SQ 335 I + + + G MA QTD+KRL+AY+SV +G++L+ + + Sbjct: 296 SAIGWIIIIFACLTLIIGNAMAVIQTDMKRLLAYSSVGQIGYILLGLGISIAAYGTQTGE 355 Query: 336 LAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVAT 395 +A GA+ + H L A LF++ G + ++ TR++ + GL M L A A Sbjct: 356 IALAGAIYHTVNHALMKALLFLVAGVVIHQLGTRNLNELSGLAKTMPKTTFAFLIGAAAI 415 Query: 396 LGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQ 455 +GMP F +++I S P++ I+ G F + + +L+ +FG+ ++ + Sbjct: 416 VGMPPLNGFASKWLIYESSAIFNPILGAIAIIGTAFCTAAYVRVLY-TFFGRPSEKVMAA 474 Query: 456 ELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWF 500 + P S+ ++L+L ++++G P I D + + F Sbjct: 475 KDPETSMMLPMLLLVLA--IIIMGLLPWQISDKVMIPAARMLEQF 517 >UniRef50_C0XU58 CPA3 family monovalent cation (K+ or Na+):proton (H+) antiporter-3, MnhA subunit n=1 Tax=Corynebacterium lipophiloflavum DSM 44291 RepID=C0XU58_9CORY Length = 954 Score = 308 bits (790), Expect = 3e-82, Method: Composition-based stats. Identities = 107/501 (21%), Positives = 193/501 (38%), Gaps = 29/501 (5%) Query: 15 FLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPR 74 L R + W + L +L + + WIP Sbjct: 14 VLAPFVGRVLGRNAGW---------MLALPLLGAAVIGALAYVSPSAGDAHAETVAWIPS 64 Query: 75 FGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAI 134 + L IDGLS++ ++L L+G + S + + + + F+L + + + L Sbjct: 65 LNVDFALRIDGLSIVFLMLVLLIGAGVLAYSTRYLHQSKPSFYLLMCGFAAAMSTLVLTD 124 Query: 135 DMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVF 194 ++ +F+ WEM + +FLIA G K A + + T GL++L A + + Sbjct: 125 NLVVFYIAWEMTTLCSFFLIANGGEKGYAP------AIRTLLVTVGGGLLLLTATVIMCI 178 Query: 195 VHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTA 254 + E P G+ L+ L A K P WLPD+ Sbjct: 179 TTGSTQLSVVLADETWTQRP---GLTTLVALLVAGAAFTKSAQFPFQAWLPDSMVAIAPV 235 Query: 255 GSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRL 314 + A ++K Y +LR+S A + + G+I +GA A Q+D+K L Sbjct: 236 SAYLHAAAMVKAGIYLILRYSPMF--AAVDAWHIALVTAGLITSLFGAMTAVKQSDLKAL 293 Query: 315 IAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMM 374 +AY+++S +G ++ + G+Q A A++ IAH + A LF+ G + TR+ + Sbjct: 294 LAYSTMSQLGLLVAVVGIGTQEALTAAIVHTIAHAVFKAALFMSIGIVEHETGTRNFHEL 353 Query: 375 GGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP------VITVISTFG 428 L +M A+ + A + G+P FV + M+L ++T Sbjct: 354 RNLRVRMPVTQAIVVISAASMAGLPPLAGFVSKEMLLAAGLSAPHKEALVTLVTGGIVVT 413 Query: 429 LVFASVYSLAMLHRAYFGKAKSQIA--SQELPGMSLRELFMILLLVVLLVLLGFYPQPIL 486 +F YS + G ++Q++ S+ + S + +L V +G YP + Sbjct: 414 SIFTFAYSYRYVLGV-LGDRRNQLSGTSKTVGEASPSFFAVPAILAAATVAIGIYPHMLN 472 Query: 487 DTSHSAIGNIQQWFVNSVTTT 507 A+ F + Sbjct: 473 GPVADAVLATTGEFEDPHLAL 493 >UniRef50_Q04YB3 NADH dehydrogenase (Ubiquinone), L chain n=7 Tax=Bacteria RepID=Q04YB3_LEPBL Length = 648 Score = 308 bits (790), Expect = 3e-82, Method: Composition-based stats. Identities = 115/511 (22%), Positives = 216/511 (42%), Gaps = 24/511 (4%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 L+P L+ +P IG + ++ + + L+ L+L ++ Sbjct: 6 LIPALVALPLIGFLISGLFGKWLKGFTGIFSTGVVFLSFGLALVSFVLF-----HPMERT 60 Query: 62 QWQSEFDMPWIPRFGISIHLA--IDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQG--FFH 117 + +PWI GI + LA +D LSL M ++ +G L L S ++ G + Sbjct: 61 IPEIVAVLPWIETGGIQVSLAYQVDQLSLYMTLIITGIGSLIHLYSIGYMKDDPGFARYF 120 Query: 118 LNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIY 177 L + ++ + LA ++ L F WE + + Y LI HK S A K FI Sbjct: 121 AYLNLFIFAMLNLVLAENLILLFLGWEGVGLCSYLLIGFDYHKESAAN----AGMKAFIV 176 Query: 178 TQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPV 237 + L ML+ I + + + + +T +L P + + + FFI K Sbjct: 177 NRIGDLGMLLGIALVFWYTGSVS--FTTIEGAILEIPSFRYILPVTAVCFFIGAIGKSAQ 234 Query: 238 VPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 +PLH WLPDA + ++ A ++ + + R + ++ + + +G + Sbjct: 235 LPLHVWLPDAMAGPTPVSALIHAATMVTAGVFLIARLNPIFL--SAPQVGHWIVVIGSMT 292 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 F+ A + Q DIK+++AY++VS +G++ +A+ G AY + ++ H A LF+ Sbjct: 293 AFFAATIGLFQNDIKKVLAYSTVSQLGYMFVAMGAG---AYVAGLFHLMTHAFFKALLFL 349 Query: 358 LCGQLYER-IHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ 416 G + H +D+R MGGL +MK L ++A G+P F + +IL S+ Sbjct: 350 GSGSVIYALHHEQDLRNMGGLKKRMKITWITFLVGSLAISGIPPFSGFFSKDLILEKSYT 409 Query: 417 VVPVITVISTFGLVFASVYSLAMLHRAYFGKAK-SQIASQELPGMSLRELFMILLLVVLL 475 + + + + Y M + A++G+++ S + L L +++L + Sbjct: 410 YGALFYGLGIITALLTAFYMFRMTYLAFYGESRVSSDKALHLHESPLVMTIPLVILSIGA 469 Query: 476 VLLGFY--PQPILDTSHSAIGNIQQWFVNSV 504 + GF P + H F+ + Sbjct: 470 TVTGFLEVPHFLFGGVHILTNYFSPVFIRGI 500 >UniRef50_Q6GBK7 Putative antiporter subunit mnhA2 n=63 Tax=Staphylococcus RepID=MNHA2_STAAS Length = 800 Score = 308 bits (790), Expect = 3e-82, Method: Composition-based stats. Identities = 107/512 (20%), Positives = 210/512 (41%), Gaps = 46/512 (8%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 L+ LI I I + ++R + ++ I + + S+ +Q Sbjct: 3 LVYLLIAILVIMAMILLMSKR--RALAKYAGYIALVAPVISSIYFLIQIPSVAKLQY--- 57 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI---EKYQGFFHL 118 +PWI I++ L +DGLSL+ ++ L+G+ + + + + F+ Sbjct: 58 ---LSTSIPWIKTLDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKDNLPRFYF 114 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 L + +IG+ L+ + L + FWE+ V + LI+ W + A + F+ T Sbjct: 115 YLTLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWY----NNGDSQFGAMQSFMIT 170 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 GL +L+ + L + + + G+ ++ F + K Sbjct: 171 VFGGLALLVGFIMLYIMTGTNNIT---EILGQADHIKNHGLFIPMIFMFLLGAFTKSAQF 227 Query: 239 PLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 P H WLP A + APT S + ++K + LLRF+ L S + I ++G+I Sbjct: 228 PFHIWLPRAMA-APTPVSAYLHSATMVKAGIFLLLRFTPLL--GLSNMYVYIVTFVGLIT 284 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLA--------------YQGAVI 343 + +G+ A Q D+K ++AY+++S +G ++ + G A GA+ Sbjct: 285 MLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGYAQHQQDAIASIYVFVLFGALF 344 Query: 344 QMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGN 403 ++ H + LF+ G L +RD+R++ G+ + + A++ G+P Sbjct: 345 HLMNHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNG 404 Query: 404 FVGEFMILFGSFQVVPV----------ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIA 453 F+ + M L Q + I + VF Y+L M+ ++ K S++ Sbjct: 405 FLSKEMFLDALTQTGQLSQFSLISMIAIVFVGVIASVFTFTYALYMVKEVFWTKYDSKVF 464 Query: 454 SQELPGMSLRELFMILLLVVLLVLLGFYPQPI 485 +++ L+L+VL+ ++ F P Sbjct: 465 TKKNIHEPWLFSLPSLILMVLVPVIFFVPNIF 496 >UniRef50_A6Q8K1 NADH-quinone oxidoreductase, chain M n=3 Tax=Epsilonproteobacteria RepID=A6Q8K1_SULNB Length = 479 Score = 308 bits (789), Expect = 4e-82, Method: Composition-based stats. Identities = 154/497 (30%), Positives = 250/497 (50%), Gaps = 24/497 (4%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 M + P I G L + + ++IAL + L S L G Sbjct: 1 MSPLLFVFGPIILGSLMMLLGKKESGMAKYIALTLFAIMLFFSFALLSALPEEGYMDLG- 59 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL 120 + F + L +D LS++M++LT L +L L SW K + L Sbjct: 60 -------SWFAVRDFDFILSLQVDRLSVVMLILTSALLILVTLSSWTM--KDPRNYFSLL 110 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + G + GVF++ ++ FF FWE+ LVPM+FL+ +WG + RI AA KFF+YT Sbjct: 111 VLFSGPIFGVFMSTNLLWFFIFWELTLVPMFFLVGIWG-----AEGRIYAAVKFFLYTHV 165 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 + +++L+A + F+ + +S+ V L+ FI FAVKMP+ P Sbjct: 166 ASMLILLAFFLIYKE------TGIFDMTMVKEAMLSTPV--LVWWLLFIGFAVKMPIFPF 217 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H WLPDAH QAP S LAG+LLK AY ++R + + P S FA + + LG++ +FY Sbjct: 218 HTWLPDAHVQAPAPVSALLAGVLLKMGAYAMIRMVVLMLPEQSEHFAWVILVLGLVTLFY 277 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 +MA +T +K+++AY+S+SHMG V +AI T S A+ +MI H L + LF++ G Sbjct: 278 AGFMALYETHLKKMVAYSSISHMGLVTVAIATLSYAGLSAALYEMIGHALIISPLFLIAG 337 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 L+ R + M+ MGGL K +L A+ + +A LG+PGT F+GE IL + + + Sbjct: 338 FLHSRTGSWQMKDMGGLMQKAPYLSAIFVLAGLAALGLPGTMGFIGELTILIAAIEQYGI 397 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 ++ G + + Y + R +G+ KS + + M+ E +++ + ++ G Sbjct: 398 GLIVVALGSMIGAGYIIWTFRRVVYGE-KSALVEKSDFRMNRVEFAALIIFALGIIGFGL 456 Query: 481 YPQPILDTSHSAIGNIQ 497 +P + DT ++A + Sbjct: 457 FPSVLFDTINAAFSMLL 473 >UniRef50_C6D5D4 Proton-translocating NADH-quinone oxidoreductase, chain L n=82 Tax=Bacillales RepID=C6D5D4_PAESJ Length = 625 Score = 307 bits (788), Expect = 5e-82, Method: Composition-based stats. Identities = 112/510 (21%), Positives = 206/510 (40%), Gaps = 21/510 (4%) Query: 4 PWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQW 63 + L PF L R I I +L +SL ++++ Sbjct: 9 WLIPLFPFASFLLLTALGRSYRLAGVLIGSIGSLASLVMSLLVFIERLGPNAVDYSGD-- 66 Query: 64 QSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF--FHLNLM 121 + + + + I I L+ LM+V+ ++ L + S ++K + F+ + Sbjct: 67 --SYKWIGLGEYTLKIGFEITNLNALMLVIVTVVSFLVNVYSAGYMKKDERITVFYGYVA 124 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 ++G+ L+ +M +F+ FWE++ V + L+ W K + FI T+ Sbjct: 125 LFTFAMLGLVLSDNMLVFYMFWELVGVCSFLLVGFWYAKPAARAAAKK----AFIVTRIG 180 Query: 182 GLVMLIAILALVFVHYNATGVWTF---NYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 +L+ I+ L + ++ + E + ++ + + L F+ K Sbjct: 181 DAGLLLGIIVLFWYMPGHALDFSSIHNVFTEGQSGTITMTITTSIALLLFMGVIGKSGQF 240 Query: 239 PLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 PLH WLPDA + PT S A ++ + L R ASA + G Sbjct: 241 PLHVWLPDAM-EGPTPISALIHAATMVAAGVFLLARTFDIF--EASASAMHTVAYFGGFT 297 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 + A +A AQ DIKR++AY+++S +G++++A+ GS G V + H A LF+ Sbjct: 298 AIFAATVALAQNDIKRILAYSTISQLGYMVMAMGLGS---MTGGVFHLFTHAFFKALLFL 354 Query: 358 LCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV 417 G + +HT+++ MGGL SKM+ A++ G+P F + IL + Sbjct: 355 AAGSVIHAVHTQNIHEMGGLGSKMRITAWTFAIGALSLSGIPPFSGFWSKDAILASALDE 414 Query: 418 VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVL 477 P + + ++Y + + GK++ Q E+ S +L+L V+ V Sbjct: 415 NPFLFAVGLAAAFCTALYMSRLFFIVFMGKSRLQ-QPAEVKESSKVMTIPLLVLAVISVG 473 Query: 478 LGFYPQPILDTSHSAIGNIQQWFVNSVTTT 507 GF P S + + + S Sbjct: 474 AGFIETPWNGWLGSWLTDGAEEVHASGAAI 503 >UniRef50_Q5EM42 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Mortierella verticillata RepID=Q5EM42_9FUNG Length = 495 Score = 307 bits (788), Expect = 5e-82, Method: Composition-based stats. Identities = 156/497 (31%), Positives = 258/497 (51%), Gaps = 23/497 (4%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L L IP IG + + + I L + + +SL +W + + Sbjct: 1 MLTALFFIPLIGALSLLFVNK-NESLMKRITLGSTIINFVISLVIWGKFDNNTH------ 53 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 + +F W ++ IDG+SL V+LT L + +L SW + + LN + Sbjct: 54 --EYQFVQEWAEISFCHFNVGIDGISLFFVLLTTFLFPIIILTSWDH-KNNLKSYLLNFL 110 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + +I F+ +D+ LF+ F+E +L+P++ +I +G + + A F+YT Sbjct: 111 ILESLLIATFIVLDLLLFYIFFESILIPLFIIIINFGDLLT----KEKAGFLLFLYTLFG 166 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 L M L+ + T +++ L + V+ LL +GF IAF VK P++P H Sbjct: 167 SLFM------LLSIITILILTGTTDFQILSTIDFGTDVQKLLFVGFLIAFIVKTPLIPGH 220 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WL AH AP GSV LAG++LK A Y LR +P P+A+ F P+ L VI I Y Sbjct: 221 IWLGFAHVAAPIGGSVLLAGVILKLATYLALRVMIPFLPDATLYFTPLIYTLAVISIIYA 280 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG- 360 + D+K +IAY+SVSHMG V++ +++ + +GAVI +AHG+ + LFI+ G Sbjct: 281 SLTCLRLIDVKAIIAYSSVSHMGVVVLGLFSNNLQGIEGAVILGLAHGVISPLLFIIVGD 340 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 LY R HTR ++ G+ + M L + F +A + P +GNF+GEFM G+FQ P+ Sbjct: 341 ILYTRSHTRIIKYYRGIATSMPILSLIFFFATLANIATPFSGNFIGEFMSFAGAFQQNPI 400 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 + ++ G+ + YS+ + +R FG A +++ +P +S RE F++L L+++ +LG Sbjct: 401 MAILGATGIFLGTGYSIWLFNRISFGTASRYMST--MPDISRREFFVLLPLIIVSFILGI 458 Query: 481 YPQPILDTSHSAIGNIQ 497 YP +LD+ H I ++ Sbjct: 459 YPNVVLDSLHLGISSLL 475 >UniRef50_B1ZBB1 Proton-translocating NADH-quinone oxidoreductase, chain M n=5 Tax=Proteobacteria RepID=B1ZBB1_METPB Length = 492 Score = 307 bits (788), Expect = 6e-82, Method: Composition-based stats. Identities = 166/504 (32%), Positives = 246/504 (48%), Gaps = 23/504 (4%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L IL+P + G R + R +AL LTL ++ LW G Sbjct: 1 MLTATILLPLLTGLAVLALPRHRPGLVRRVALAGSVLTLGAAVVLWAGFD------PGAG 54 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q +PWIP G S + + GLSL +++LT +L + ++ E + Sbjct: 55 GLQWRMTLPWIPSLGASYDVGVGGLSLALILLTAILLTVVMVYVLGE-HDRAHAHAFLFL 113 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + G+IG+F A D+ LF+ F+E+ LVPMYF++ +WG G+ R AA KFF+YT+A Sbjct: 114 LLATGLIGLFAAQDLLLFYLFFEVGLVPMYFIVGIWG-----GERRRYAALKFFLYTRAG 168 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 L ML+ L L T + + L+ L + F VK+PVVPLH Sbjct: 169 SLAMLLGFLTLYLAMEPHTFSLP-AIVQARPLDRTPLAGGLVFLALLLGFGVKLPVVPLH 227 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLPDAH +APT GSV LAG+ LK YG+L LP P+ A F + + L + + YG Sbjct: 228 NWLPDAHVEAPTEGSVVLAGLQLKMGGYGMLAVLLPTLPDTVARFGWLLVALALASLLYG 287 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGS--------QLAYQGAVIQMIAHGLSAA 353 A A AQTD+KRL+AYTSV+HMGFV + + + +LA GA +QM++HG Sbjct: 288 ALAALAQTDMKRLVAYTSVNHMGFVTLGVAVAALAGNEGVRRLALNGAAVQMVSHGFLTG 347 Query: 354 GLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFG 413 G+F+L G L R TR++ GGL M L A +LG+PG F+ EF + Sbjct: 348 GMFLLVGMLQHRAGTRELARFGGLIGSMPAFSGLFGLLAFGSLGLPGLSGFIAEFQAIGA 407 Query: 414 SFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVV 473 + Q+ + ++ LV + L ++ G+A + + LP ++ E L V Sbjct: 408 ALQLSAWVAALAVLALVVTTAVYLRLVTGLLMGRAPPDMPA--LPPLTAAEAGSAGALAV 465 Query: 474 LLVLLGFYPQPILDTSHSAIGNIQ 497 L + LG P ++ + Sbjct: 466 LALGLGVLPSVLVALLDGTTAALA 489 >UniRef50_C1F222 NADH dehydrogenase I, M subunit n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F222_ACIC5 Length = 525 Score = 307 bits (787), Expect = 8e-82, Method: Composition-based stats. Identities = 170/511 (33%), Positives = 258/511 (50%), Gaps = 31/511 (6%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L W I F+G T + + RW+AL+T + L+L LQ Sbjct: 16 LAWTIYASFLGAAAVLLTPQSRPQFTRWVALLTSLVGFVLTLGAVLQYQPGS-------- 67 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMW 122 D WIP+ GI LA DG+SL +++LTGL + +L SW IE F + Sbjct: 68 LLVVADSTWIPQLGIRYTLAADGISLTLLLLTGLAAMAGILFSWN-IEHRTREFFAFYLV 126 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKA-SDGKTRITAATKFFIYTQAS 181 ++GGV GVFL+ D+FL F F+E+ ++P YFLIA+WG D + R AA K +Y+ A Sbjct: 127 LIGGVYGVFLSFDLFLLFVFYEIAIIPKYFLIAIWGSAPNGDTRPRQYAAMKLALYSFAG 186 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 ++LI ILA + A+G T N L + P S + F+ FAV + P H Sbjct: 187 SALVLIGILA----AWAASGSQTLNLAVLAHYPFSQHFQMWAFPLVFVGFAVLAGLWPFH 242 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAP----------IAM 291 W P H+ APTA S+ LAG+++K AYG LR ++ LFP A + + Sbjct: 243 TWAPTGHAAAPTAASMLLAGVVMKLGAYGCLRVAMMLFPLGLAPWGFHILGLGSWRDVFA 302 Query: 292 WLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLS 351 L +I I YGA +A Q D K +I Y+SVSHMGFVL+ + T SQ+ GAV+QM +HG+ Sbjct: 303 LLALISIVYGASVALVQRDFKFVIGYSSVSHMGFVLLGLMTLSQIGIDGAVLQMFSHGII 362 Query: 352 AAGLFILCG-QLYERIHTRDMRMMG--GLWSKMKWLPALSLFFAVATLGMPGTGNFVGEF 408 A LF + G +Y+R HTRD+ +G L + + A+A++G+PG F+ E Sbjct: 363 AGLLFAVVGRMVYDRTHTRDLAALGPMHLSRALPFAAITFTLAAMASVGLPGFSGFIAEL 422 Query: 409 MILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYF----GKAKSQIASQELPGMSLRE 464 ++ G ++ +P + G++ ++ L R +F LP ++L E Sbjct: 423 QVILGVWRSMPWMVFAVALGILIGVAFTWRALTRVFFPAAQSDEPPAPIEHPLPPITLPE 482 Query: 465 LFMILLLVVLLVLLGFYPQPILDTSHSAIGN 495 LLL+ +++G YP ++ ++ + Sbjct: 483 RAGALLLLTATIIVGLYPHILMRLILPSLQS 513 >UniRef50_A9B486 Proton-translocating NADH-quinone oxidoreductase, chain M n=4 Tax=Chloroflexi (class) RepID=A9B486_HERA2 Length = 565 Score = 306 bits (786), Expect = 8e-82, Method: Composition-based stats. Identities = 159/558 (28%), Positives = 258/558 (46%), Gaps = 63/558 (11%) Query: 2 LLPWLILIPFIGGFLCWQTER--FGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAG 59 + + L P +G L + + W + L L+L LWL GG++ ++ Sbjct: 13 ITTLIALSPLVGMLLALVFPKPAENSRTIAWGVFAWSLVPLGLTLFLWLSGGFNPALASV 72 Query: 60 IPQ---WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFF 116 Q + W+P F + +DGL+ +V LT L + +L +++ I+ Q + Sbjct: 73 AGDQAMIQQVDRVRWVPFFNADYFVGLDGLNFPLVFLTTALTPVCILAAFR-IKHRQNVY 131 Query: 117 HLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFI 176 ++ + ++G F++++ L F FWE LVPM+F+I WG G+ R AA KFF+ Sbjct: 132 LALMLLLESAMLGYFVSLNFLLLFLFWEFSLVPMFFIINNWG-----GENRRYAAFKFFV 186 Query: 177 YTQASGLVMLIAILALVFVHYNA----------------------TGVWTFNYEELLNTP 214 YT A + ML+ + G + L + Sbjct: 187 YTMAGSVAMLLIFEFIYLATGTFDLVVLSRLGQGLPVDPALLAPKLGAGYTSGATLQSML 246 Query: 215 MS---------------SGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDL 259 S ++ F+AFAVK+ V PLH W PD + APT+GS+ + Sbjct: 247 FSAVEDIGLTSILGTSNGTPAAIVFWSIFVAFAVKLAVWPLHTWQPDTYENAPTSGSMIV 306 Query: 260 AGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTS 319 + ++ K AYG++R + LFP + FAP L + I +GA+ AQ ++KRLIAY S Sbjct: 307 SAVMSKMGAYGMIRIMIMLFPQQTKFFAPALAILALASILFGAYAGLAQINLKRLIAYAS 366 Query: 320 VSHMGFVLIAIYTGSQLA---------------YQGAVIQMIAHGLSAAGLFILCGQLYE 364 ++HMG+VL+ + + A G QM+AHG S A LF L G+LYE Sbjct: 367 INHMGYVLLGLAAVASAAPESLGDLAVNIRASAMNGVQAQMVAHGFSTAALFFLAGELYE 426 Query: 365 RIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVI 424 R T + GGL M + A LG+PG FVGEF I G++ PVIT I Sbjct: 427 RTGTYQLDQFGGLRKVMPIFAGIMGVAMFANLGLPGLAGFVGEFFIFRGAWGTQPVITTI 486 Query: 425 STFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQP 484 + GL+ ++ + M + ++G ++ + + + L L+++L++ G +P+P Sbjct: 487 AVLGLIVTALVLIRMYQKIFYGPVNHKLTNLPDIKVGDWAFNVTLPLIIVLLVFGIFPKP 546 Query: 485 ILDTSHSAIGNIQQWFVN 502 ++D S+ A + Q F N Sbjct: 547 LMDLSNYAATVMAQVFTN 564 >UniRef50_C8W236 Hydrogenase, membrane subunit n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W236_DESAS Length = 661 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 105/523 (20%), Positives = 201/523 (38%), Gaps = 45/523 (8%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L ++++ ++ G + + K+ W+ G L L L L + Sbjct: 9 LGLMVILLYLSGAILPLLLKTSRKLSLWLGCFLGGAAGLLGLGLGLASLLAPEPWTVNLG 68 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIE----KYQGFFHL 118 G+ + +DGLS V L+ L SW + + ++ Sbjct: 69 TVLP---------GVVFQIVMDGLSGFFVATISLVVALVSFYSWNYMSIYKTENIAWWSF 119 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 + ++ V + +F FWE+M + YFL+ K A + + T Sbjct: 120 CYNVFVLSMLLVVTVTNAIMFLIFWELMTLASYFLVTFEYRHQQVRK----AGFSYIVMT 175 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 + ++ A + TG W F + + V+ L+ + I F K +V Sbjct: 176 HLGTVFIMTAFFLMF----KGTGGWDFAVLSANSHGLPDAVKSLIFVCALIGFGTKAGIV 231 Query: 239 PLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 PLH WLP AH AP+ S ++G++LKTA YG++R + + A + + + +GV+ Sbjct: 232 PLHIWLPLAHPAAPSNVSAVMSGVMLKTAIYGMIRLIIDILGPGPAWWGGVVLAVGVVSA 291 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYT---GSQLAY--------QGAVIQMIA 347 G A + D+KRL+A+ SV ++G +L+ + T + + ++ Sbjct: 292 VMGVLYALMEHDMKRLLAFHSVENIGIILMGLGTALIFYAWSMPVAAAVALAAGLFHVLN 351 Query: 348 HGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGE 407 H + + LF+ G +Y H++D+ +GGL KM L L A++ +P F E Sbjct: 352 HAIFKSLLFLGTGSVYYTTHSKDIEELGGLIKKMPQTALLFLVGAISISAIPPFNGFASE 411 Query: 408 FMILFGSFQVVP-VITVISTFGLVFASV-----------YSLAMLHRAYFGKAKSQIASQ 455 + I + ++ + V + V + ++ +++ + Sbjct: 412 YQIYQSLLGMSYQKVSAFWSIAGVLSGVALALTGALAAACFVKAFGISFLALPRTK-KAA 470 Query: 456 ELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQ 498 + + L VL +L G P +L+ I + Sbjct: 471 AAEEVPFLMRISMAPLAVLCLLFGVAPGLVLNNITPLIEQLVP 513 >UniRef50_A5UV30 NADH dehydrogenase (Quinone) n=4 Tax=Bacteria RepID=A5UV30_ROSS1 Length = 793 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 91/469 (19%), Positives = 182/469 (38%), Gaps = 23/469 (4%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 + +L F G RF + W+A + + + L Sbjct: 1 MLTAVLSGFGGAIAAPWLHRFAPRHAGWLAALLPFALMIYFISLVPAV---------AGG 51 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQ--GFFHLNL 120 F W+P G+++ IDGLSLL +L +G L ++ + + G L Sbjct: 52 DALRFSYAWVPGLGVNLSFRIDGLSLLFALLITGIGTLVLIYAGGYLANDPMLGRMLTLL 111 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + + ++G+ + ++ F FWE+ + Y LI + + AA + + T Sbjct: 112 LIFMAAMLGIVTSDNLIALFVFWELTTISSYMLIGY----KHEYEKARKAALQSLLVTGI 167 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 GL +L I+ L + +++ + ++ K P Sbjct: 168 GGLALLAGIVLLGQIAGTLELSEMLKQGDVVRA---HPLYGGILALVLFGAFTKSAQFPF 224 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H WLP A S + ++K + L R + L + + + + G + Sbjct: 225 HFWLPGAMEAPTPVSSYLHSATMVKAGVFLLARLNPVL--GGTEAWQLLLTFFGGATMIV 282 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 G+++A QTD+KR++AYT+VS +G +++ I G+ A + A++ + H L LF + G Sbjct: 283 GSFLAVQQTDLKRILAYTTVSALGTLVLLIGVGTDDAIKAAMVFTLGHALYKGALFQVAG 342 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 + RD+ +GGL + M A ++ A++ G+P F+ + + + P+ Sbjct: 343 SVDHETGARDISQLGGLRTAMPITAAAAMLAALSMAGLPPMLGFIAKEVQYKANLS-EPI 401 Query: 421 ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMIL 469 + ++ + V + + R + G+ + L + Sbjct: 402 LIGVALLTNILTVVAAGFVSLRVFTGQP--VHTPKHAHEAPLSMWLGPV 448 >UniRef50_D1A432 Proton-translocating NADH-quinone oxidoreductase, chain M n=7 Tax=cellular organisms RepID=D1A432_THECD Length = 496 Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats. Identities = 161/485 (33%), Positives = 246/485 (50%), Gaps = 30/485 (6%) Query: 27 VPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGL 86 R G+TL +L + + Q EFD W P + HL +DG+ Sbjct: 25 AVRRYGAAVTGITLLPALLAAAAFDHG-----DPRRMQLEFDRAWAPAIDLRFHLGVDGV 79 Query: 87 SLLMVVLTGLLGVLAVLCSWKE--IEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWE 144 SL +V+LT LL L ++ + + +++ + G++G F+A+D+ LFF F+E Sbjct: 80 SLPLVLLTALLTFLCLVYTLRHPPQGGSARLLIASVLVLEVGMLGTFVALDLLLFFVFFE 139 Query: 145 MMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWT 204 ++L+PMY +IALWG G R AA KF +YT + L L + T T Sbjct: 140 VVLIPMYLVIALWG-----GAGRRAAAWKFILYTLL------GSGLLLAGLLVVGTNAGT 188 Query: 205 FNYEELLNTP---MSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAG 261 + L P ++ + + A+K+P+ PLH WLPDAH++APT GSV LAG Sbjct: 189 LDMTALAEAPGQGLTRTAQITAFALIGLGLAIKVPMWPLHTWLPDAHTEAPTIGSVLLAG 248 Query: 262 ILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVS 321 +LLK YGL+R +LP P + +AP + VIGI YGA AQ D+KRLIAY+S+ Sbjct: 249 VLLKMGTYGLVRIALPAAPEGAVVWAPWLGLMAVIGIVYGALACLAQRDLKRLIAYSSIG 308 Query: 322 HMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMM-GGLWSK 380 HMGFVL+ I T + + A++ IAHGL LF L G + +R T ++ + GG+ +K Sbjct: 309 HMGFVLLGIATLTPVGVNAALLGNIAHGLITGLLFFLAGGVKDRYGTGELDSLGGGMLTK 368 Query: 381 MKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSF--------QVVPVITVISTFGLVFA 432 L + F +VA+LG+PG F GE + L G++ + + G V Sbjct: 369 APLLASFLTFASVASLGLPGLAGFWGEMLALLGAYRPAEALPRETFVTFMAVGALGAVLT 428 Query: 433 SVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSA 492 + Y L +L + G LPG++L E + LV L +L+G +P+ +LD + + Sbjct: 429 AAYFLRLLAKITHGPVAEHRRRDALPGLTLAEYAAWVPLVALTLLVGLWPKLLLDLTTAP 488 Query: 493 IGNIQ 497 + + Sbjct: 489 VTALL 493 >UniRef50_B6YQ51 NADH dehydrogenase I subunit L n=32 Tax=Bacteroidetes RepID=B6YQ51_AZOPC Length = 637 Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats. Identities = 107/502 (21%), Positives = 202/502 (40%), Gaps = 26/502 (5%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGV-KVPRWIALITMGL-TLALSLQLWLQGGYSLTQSA 58 M +I++PF+ F+ + I M + T + + + Sbjct: 1 MSSLLIIIVPFVLFFVLGLLGTNLKSNISGIIGTGGMSICTFTAYVMAYQYFFRIGKKGE 60 Query: 59 GIPQWQSEFDMPWIPRFG---ISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQG- 114 G+ + D W+ G I++ + +D +S++M+V+ + ++ + S ++ G Sbjct: 61 GVWKEIVPLDFQWLHFMGEMHINLGVLLDPISVMMLVVITTVSLMVHIYSLGYMKGEIGF 120 Query: 115 -FFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATK 173 ++ L ++G+ +A ++F + FWE++ V Y LI + K S + A+ K Sbjct: 121 QRYYAFLSLFSFSMLGLVVATNIFQMYIFWELVGVSSYLLIGFYYIKPS----AVAASKK 176 Query: 174 FFIYTQASGLVMLIAILALVFVH-------YNATGVWTFNYEELLNTPMSSGVEYLLMLG 226 FI T+ + L LI IL L + A T + V + Sbjct: 177 AFIVTRFADLGFLIGILILSYYTRTFDFRALTANNAVLVTASTAGRTFLGLSVSVWALAL 236 Query: 227 FFIAFAVKMPVVPLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAE 285 F+ A K + PLH WLPDA + PT S A ++ Y + R P++ A+ Sbjct: 237 IFMGGAGKSAMFPLHIWLPDAM-EGPTPVSALIHAATMVVAGVYLITRL-FPVYFFAAPS 294 Query: 286 FAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQ-----LAYQG 340 + ++G F+ A +A QTDIKR++A++++S + +++ A+ L Y Sbjct: 295 VLKMIAFVGAFTSFFTAIIAVVQTDIKRVLAFSTISQISYMMAALGVSKYGGYEGLGYTA 354 Query: 341 AVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPG 400 ++ + H A LF+ G + +++ +M M GL M L +A G+P Sbjct: 355 SMFHLFTHAFFKALLFLGAGSVIHVVNSNEMNNMCGLHKYMPITNITFLIACLAIAGIPP 414 Query: 401 TGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGM 460 F + +L + P+I I + Y + ++ K Sbjct: 415 FSGFYSKDEVLVATLHYQPIIFWILWVVAGLTAFYMFRLYFCIFWNGEKKYDIYHASHES 474 Query: 461 SLRELFMILLLVVLLVLLGFYP 482 +F +++L V V G P Sbjct: 475 PFLMIFPLVILSVFSVFGGLIP 496 >UniRef50_D0LWA1 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LWA1_HALO1 Length = 827 Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats. Identities = 111/508 (21%), Positives = 206/508 (40%), Gaps = 31/508 (6%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 M+L ++L F G R + W+ + LA L+ + S+ S Sbjct: 1 MVLGIMVL--FAGALWAPLVNRLSARFAGWLCALAPLALLAWFLRETGRLSASVDASGQP 58 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF--FHL 118 + + W+P ++ +DGL+LL VL +G L ++ + + ++ F Sbjct: 59 QPREWLETLFWLPD---AVAFRLDGLALLFAVLITGIGALVLIYAGGYLGEHPRRGTFFA 115 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 +L + ++G+ ++ D F FWE+ V + LI AA K + T Sbjct: 116 SLFLFMAAMLGIVVSDDAIALFVFWELTSVASFLLIGF----EDQRPEARVAARKALLIT 171 Query: 179 QASGLVMLI-------AILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAF 231 A G+ +L+ A + L +AT + + L P+ + +L + Sbjct: 172 GAGGMALLVGLVLLAHAAMDLGLSSADATRISRLSEVPLREHPLYTP----ALLLVLLGA 227 Query: 232 AVKMPVVPLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIA 290 K VP H WLP A + APT S + ++K + L R S L + + Sbjct: 228 FTKSAQVPFHIWLPAAMA-APTPVSAYLHSATMVKAGVFLLARLSPAL--GGTLLWQGSL 284 Query: 291 MWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGL 350 + GV+ + ++A Q D+KR++AY++V+ +G +++ + G + A + A++ ++AH L Sbjct: 285 ITAGVLTMLVAGYLAVRQRDLKRILAYSTVAVLGILVMLLGIGDRHAVEAAIVFLVAHAL 344 Query: 351 SAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMI 410 A LF++ G + TRD+ +GGL M A +L A++ G P F+G+ ++ Sbjct: 345 YKAALFMVAGNIDHGTGTRDVGRLGGLRRAMPLTCAAALLAALSKAGAPPMFGFLGKELL 404 Query: 411 LFGSFQV---VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFM 467 ++ + + + + R +FG + M Sbjct: 405 YGSRLTRDDLSALLIAAAVAVNITLVAAAFLVGVRPFFGSRRE--TPHAPHEMPPSMWLG 462 Query: 468 ILLLVVLLVLLGFYPQPILDTSHSAIGN 495 LL + G P P T S+ Sbjct: 463 PALLAAGGIFAGLVPGPFAHTLGSSAVA 490 >UniRef50_A6TVL5 NADH dehydrogenase (Quinone) n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TVL5_ALKMQ Length = 498 Score = 305 bits (781), Expect = 4e-81, Method: Composition-based stats. Identities = 92/432 (21%), Positives = 194/432 (44%), Gaps = 17/432 (3%) Query: 71 WIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQ-----GFFHLNLMWILG 125 W P GI +D S LM ++ + L ++ S K+IE ++ + +L Sbjct: 67 WNPTIGIE--FVVDEFSALMTLVVLSVATLIIIYSLKDIEHEILKEQFFSYYTLIFLLLF 124 Query: 126 GVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVM 185 +IG+ D+F + F E++ + +I++ K + A+ K+ + + + Sbjct: 125 SMIGMIFTNDLFNLYVFMEILSLTSCGIISI-----KRKKENLMASFKYLMLGAIGSVSI 179 Query: 186 LIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLP 245 L+ I L V + + + + + + F +K + PLH WLP Sbjct: 180 LMGIALLYMVTGHLNMTAAYEVITQVWQSYPRNI-LIALGFILTGFGIKAAIFPLHIWLP 238 Query: 246 DAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNA---SAEFAPIAMWLGVIGIFYGA 302 DAHS APT S L+G+++K + + + + S + V+ + G+ Sbjct: 239 DAHSNAPTPSSALLSGLVVKVYVFAIAKILFRVLGQDIVQSIGVTEFITYFAVLSMIMGS 298 Query: 303 WMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQL 362 A QTDIKRL+AY+SV+ +G++ + + ++L + + +I H L + LF+ G + Sbjct: 299 VFAIGQTDIKRLLAYSSVAQIGYIFLGLGLATELGFSAGLFHVITHALMKSALFLSAGAI 358 Query: 363 YERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVV-PVI 421 + RD+R + G+ +M + A+ +G+PG F+ ++ + + PV Sbjct: 359 IYQTGKRDIRDLDGIGYQMPITMGVFSVAALGMIGIPGLNGFMSKWYLSLAVLEADKPVF 418 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 ++ ++Y L ++ A+ ++ + L + ++ ++++ + V++GF+ Sbjct: 419 LIMILISSFLNAIYYLPIIIAAFLKESNERDNVMVLDRLPKTMMYPMVIIAIGCVVMGFF 478 Query: 482 PQPILDTSHSAI 493 P ++D A+ Sbjct: 479 PHIVMDVVERAV 490 >UniRef50_C0Z765 NADH-quinone oxidoreductase chain L n=2 Tax=Bacillales RepID=C0Z765_BREBN Length = 637 Score = 305 bits (781), Expect = 4e-81, Method: Composition-based stats. Identities = 102/495 (20%), Positives = 194/495 (39%), Gaps = 22/495 (4%) Query: 1 MLLPWLI-LIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAG 59 M WLI L P + + R + + + ++ +++ ++ + G Sbjct: 5 MHYAWLIPLFPLLAFIVIVSFGRQLKEGAAIVGITLTAVSFGIAVLIFWE-----RFQGG 59 Query: 60 IPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF--FH 117 + D I I++ ++ L+ +M+V+ L+ +L + S + + F F+ Sbjct: 60 GTDYNYVIDWLHIGDIVINMGFEVNPLNAMMLVIVTLVSLLVQIYSKGYMHGDERFPVFY 119 Query: 118 LNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIY 177 L ++G+ ++ ++ + FWE++ V + L+ + K FI Sbjct: 120 QYLALFTFSMLGLVISPNLLQVYIFWELVGVCSFLLVGYYYFKNEAKAAAKK----AFIV 175 Query: 178 TQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPV 237 T+ L + I I L + + F L + + L + FI K Sbjct: 176 TRIGDLGLFIGICLLFWWTGSFEYGAIFESIAL--GRLEPWMITLAAILIFIGAMGKSGQ 233 Query: 238 VPLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVI 296 PLH WLPDA + PT S A ++ Y + + +A + ++G Sbjct: 234 FPLHTWLPDAM-EGPTPVSALIHAATMVAAGVYLVAATYPLFIASDTA--LTVVAYVGGF 290 Query: 297 GIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLF 356 + A + Q DIKR++AY++VS +G++++A+ Y ++ H A LF Sbjct: 291 TAIFAASIGLTQRDIKRVLAYSTVSQLGYMMMALGVAGAAGYVAGSFHLMTHAFFKALLF 350 Query: 357 ILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ 416 + G + +HT+++ MGGLW KM L +A G+ F + IL + Sbjct: 351 LGAGSVIHAVHTQNVFEMGGLWKKMPITALTFLIGCLAIAGIFPFAGFWSKEAILGAVYG 410 Query: 417 VVPV-ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLL 475 + I+ F + Y + + GKA+ + E +L+L +L Sbjct: 411 AHRYDLLFIALLAAFFTAFYMFRLFFLTFAGKARGK---HEAHESPGVMTGPLLVLALLA 467 Query: 476 VLLGFYPQPILDTSH 490 V+ GF P Sbjct: 468 VVAGFVNTPYAPLLS 482 >UniRef50_Q47T29 NADH dehydrogenase (Quinone) n=4 Tax=Actinomycetales RepID=Q47T29_THEFY Length = 982 Score = 304 bits (779), Expect = 5e-81, Method: Composition-based stats. Identities = 112/487 (22%), Positives = 190/487 (39%), Gaps = 32/487 (6%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 ++ L+ ++G + +AL+ + I Sbjct: 1 MIWLLVAHFTAAALAPALVRKWGRQAFFALALVPASAAI----------WALPRAPGVIA 50 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQ---GFFHL 118 F +PW P + +++ +D LSL+M++L +G L +L + + G F Sbjct: 51 GEPELFFLPWAPNYQLALAFRMDALSLVMLLLAAGIGALILLYCARYFSDDEPGLGRFAG 110 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 L G +IG+ LA D+ + +WE+ V Y LI + R AA T Sbjct: 111 VLTGFAGAMIGLVLANDLIQLYLYWELTTVFSYLLIGHY---PERRDNRRAAAM-AINVT 166 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 GL ML+ ++ L T+ +L P S + ++ + K + Sbjct: 167 TMGGLTMLVGLVILG------ESAGTYLISGILAEPPSGTAVTVALVLILVGALSKSAIF 220 Query: 239 PLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 P WLP A QAPT S A ++K Y + R + + A+ LG Sbjct: 221 PFSLWLPAAM-QAPTPVSAYLHAAAMVKAGVYLIARLTPAF--GDIPAWQYTAVILGTAT 277 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 + W A Q D+K L+A+ +VS +GF+ G++ A + + AH L A LF+ Sbjct: 278 MIGSGWRALRQHDLKLLLAHGTVSQLGFLTAIFGIGTRDAALAGLAMLCAHALFKAPLFL 337 Query: 358 LCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV 417 + G + TRD+R + GL KM + S+ ++ G+P F + Sbjct: 338 VVGIIDHSTGTRDLRELSGLRKKMPVVFWTSVVALMSMAGLPPMAGFAAKEAAFGAFEHA 397 Query: 418 VPVITVISTFGLV----FASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVV 473 ++ ++ G+V F YSL L A+F K + L + ++L Sbjct: 398 DTLLATLALAGVVVGTLFTVGYSLRFLWGAFFDKENTSPTPL-LHPPGPLFVAPAIVLAA 456 Query: 474 LLVLLGF 480 L +L GF Sbjct: 457 LSLLGGF 463 >UniRef50_C7NST6 NADH dehydrogenase (Quinone) n=4 Tax=Halobacteriaceae RepID=C7NST6_HALUD Length = 801 Score = 304 bits (779), Expect = 6e-81, Method: Composition-based stats. Identities = 122/493 (24%), Positives = 208/493 (42%), Gaps = 45/493 (9%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L ++ +PF+ + R + + L L Sbjct: 8 VLLVVLALPFLAAAVAPLVYRLVGERVAYFGAAVAALAFGLI--------------GTQY 53 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF--FHLN 119 + +PWIP +S+ L +DGLSLL+ + +G+L S + G F+ Sbjct: 54 GAEGVVSIPWIPSLDVSLALYVDGLSLLLGFVVSGIGILIFTYSGGYMHDEPGKAKFYTT 113 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 L+ +G ++GV A D+ F FWE+ V + LI + D AA K I T Sbjct: 114 LLVFMGAMLGVAFAADLLALFVFWELTSVSSFILIGHY----QDDPDSQYAARKAMIITV 169 Query: 180 ASGLVMLIAILALVFVHYNATGVWTF----------NYEELLNTPMSSGVEYLLMLGFFI 229 A GL +LIA L L V + G TF N + S+G+ ++ + Sbjct: 170 AGGLFLLIAFLLLHTVSADVMGTATFRLAGEGSMIENAGAMRERLRSAGLFVPVLALLAV 229 Query: 230 AFAVKMPVVPLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAP 288 A K VPLH WLP+A +APT S + ++K Y + RF L S E+ Sbjct: 230 GAAAKSAQVPLHIWLPNAM-EAPTPVSAFLHSATMVKAGVYLIGRFRPLL---GSTEWEL 285 Query: 289 IAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAH 348 + LG++ + GA +A DIK L+AY++ SH+G ++ + + ++ H Sbjct: 286 LFAGLGLLTMTVGAMLAIKADDIKELLAYSTASHLGLIVAGFGIQYKYGAETGAFHILNH 345 Query: 349 GLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEF 408 L A LF++ G + +R + +GGLW + A+++ A+ G+P F + Sbjct: 346 ALFKAALFLVAGIVAHEAGSRLLSELGGLWRDLPITAAVAVVAALGMAGLPPFNGFYSKE 405 Query: 409 MILFGSFQV-------VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMS 461 ++ +F ++ V++ FG +F +YS+ L +FG + + + Sbjct: 406 LLFEATFHAAEHAGGLWWLLPVVAVFGSIFTFLYSIKFLS-LFFGDRPDAL--EHVHSPP 462 Query: 462 LRELFMILLLVVL 474 L L ++L L Sbjct: 463 LPMLAPPVILATL 475 >UniRef50_C0GDB1 NADH dehydrogenase (Quinone) n=2 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDB1_9FIRM Length = 782 Score = 304 bits (779), Expect = 7e-81, Method: Composition-based stats. Identities = 110/512 (21%), Positives = 202/512 (39%), Gaps = 50/512 (9%) Query: 5 WLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQ 64 + + +P G L + RF K+ A+IT +T + ++ Q Sbjct: 23 FAVAVPLAGSLLVFFAGRFSEKLRDICAVITALITFGIVFSMYPLVQ------------Q 70 Query: 65 SEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEK--YQGFFHLNLMW 122 + + +SIH +D + L + LA L S +E + +++ L+ Sbjct: 71 AVLQYEFAKFLQVSIHFRVDFFGFVFAALMSCIWFLATLYSIAYMEHGRAKNRYYVFLLS 130 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 LG +GV L D+F F F+E+M Y L+ + + G Sbjct: 131 TLGHCLGVVLVGDLFSLFLFFELMTFSSYVLVI-----HEETPDAMAGGAVTLYLGVFGG 185 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 L +L+AI L F + + + ++ F + F +K +VPLH Sbjct: 186 LCLLMAIFLLYFNVGTMEIIPLYEQIAASAINPYT-----VVTLFLVGFGIKAGMVPLHI 240 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNA-----------SAEFAPIAM 291 WLP AH AP S L+G+++K AYG+ R +F + S F + Sbjct: 241 WLPKAHPVAPAPASALLSGLMIKAGAYGIFRVVGMIFTPSEFSEVAVPSIVSVNFGYAII 300 Query: 292 WLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTG------SQLAYQGAVIQM 345 W+G+I +F GA+MA T K+++AY+SVS MG++L+ + T + + GA+ + Sbjct: 301 WMGIITMFLGAFMALLSTGAKKILAYSSVSQMGYILLGVGTAAYLGFAGPMGFAGALYHI 360 Query: 346 IAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFV 405 I H AGLF++ G +Y H D+ + G+ K+ ++ L G+PG + Sbjct: 361 INHAFFKAGLFMMVGSIYMITHNLDITQVRGMAKKVPFIAVTFLIGYAGIGGIPGFNGYG 420 Query: 406 GEFMILFGSFQVVPVITV--------ISTFGLVFASVYSLAMLHRAYFGKAKSQIASQEL 457 + ++ + I Y + + G + + Sbjct: 421 SKTILHHAIVDAANLHGSVPLHVAEKIFVVTSAMTLCYFAKLFRGLFLGDVPEKYDKKSY 480 Query: 458 PGMSLRELFMILLLVVLLVLLGFYPQPILDTS 489 + ++ +++ +G +P +L+ Sbjct: 481 N-FTWPVYAVLGTFGAIIIAIGLFPHFLLNRM 511 >UniRef50_D2QSX4 Proton-translocating NADH-quinone oxidoreductase, chain L n=2 Tax=Bacteroidetes RepID=D2QSX4_9SPHI Length = 642 Score = 303 bits (778), Expect = 8e-81, Method: Composition-based stats. Identities = 106/483 (21%), Positives = 194/483 (40%), Gaps = 17/483 (3%) Query: 1 MLLPWLILIPFIGGFLCWQ-TERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSA- 58 +L + L P IG + R + I+ + + + S L+ + SA Sbjct: 5 LLCALIPLFPLIGFLINGLGFRRVPKGLAGAISTVAVLASFLTSAYLFGAFLGNANLSAN 64 Query: 59 GIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF--F 116 PQ + FD + I+ ID LSLLM+++ +G L L S + +GF F Sbjct: 65 AGPQIATLFDWISVGDLHINFSFQIDQLSLLMLLVVTGVGSLIHLYSIGYMSHDEGFGKF 124 Query: 117 HLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFI 176 L + ++ + + + + F WE + + Y LI W S AA K F+ Sbjct: 125 MAFLNLFIFFMLLLVMGSNYVIMFIGWEGVGLCSYLLIGFWNKNISYNN----AARKAFV 180 Query: 177 YTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMP 236 + L L+ I L+ V F + + + L F+ K Sbjct: 181 MNRIGDLGFLLGIFMLINTFGTVEYVDIFKQAT--SLAVGDKTILAITLLLFVGAMGKSA 238 Query: 237 VVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVI 296 VPL+ WLPDA + ++ A ++ Y ++R + + + I + ++ Sbjct: 239 QVPLYTWLPDAMAGPTPVSALIHAATMVTAGIYMVVRSN--VLYTLAPLTLEIIGGIAIV 296 Query: 297 GIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLF 356 A + Q DIK+++AY++VS +G++ + + S AY + +I H A LF Sbjct: 297 TALLAASIGLLQNDIKKVLAYSTVSQLGYMFLGL---SATAYTAGMFHVITHAFFKALLF 353 Query: 357 ILCGQLYERIH-TRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSF 415 + G + + +D+R MGGL + L +A G+P F + IL F Sbjct: 354 LGAGSVIHAMSDEQDIRKMGGLRKALPVTFITFLIGTIAISGLPPFAGFFSKDEILAHVF 413 Query: 416 QVVPVITVISTFGLVFASVYSLAMLHRAYFGKAK-SQIASQELPGMSLRELFMILLLVVL 474 + ++ + G S Y +L +FG+ + ++ L +++L +L Sbjct: 414 EHNKLLWGLGVLGSGLTSFYMFRLLFLTFFGEFRGTEEQRHHLHESPATMTAPLVVLAIL 473 Query: 475 LVL 477 ++ Sbjct: 474 SII 476 >UniRef50_Q85JB2 NADH-ubiquinone oxidoreductase chain 4 n=4 Tax=Monoblepharidales RepID=Q85JB2_9FUNG Length = 457 Score = 303 bits (778), Expect = 8e-81, Method: Composition-based stats. Identities = 151/420 (35%), Positives = 233/420 (55%), Gaps = 20/420 (4%) Query: 78 SIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMF 137 + L IDGLSL+++VLT L + ++ + L L+ I ++ VFL +D+ Sbjct: 57 YMALGIDGLSLVLIVLTTFLMPICLIV--------EPELVLPLLAIEALLMAVFLVLDVM 108 Query: 138 LFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHY 197 +F+ +E +L+P+++L+ + R++AA F+YT L+MLI+I L Sbjct: 109 IFYLCFESVLIPLFYLMGKY----QGRARRLSAALSLFLYTLGGSLLMLISIGLLYLE-- 162 Query: 198 NATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSV 257 T N + LL P+ + LL LGFFIAFAVK+P++P H WLP+AH ++PT GS+ Sbjct: 163 ----ASTTNLQALLTVPIHPDYQLLLFLGFFIAFAVKIPMIPFHLWLPEAHVESPTGGSI 218 Query: 258 DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAY 317 LAGILLK YG LRFS+PLFP AS + P L +IGI Y A Q D+K++IAY Sbjct: 219 LLAGILLKLGGYGFLRFSIPLFPYASDYYQPFVALLALIGIVYAGLTAIRQIDMKKIIAY 278 Query: 318 TSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGL 377 +SV+HM ++ I+ + L +G++ M+AHGL + LF G LY+R HTR +R GL Sbjct: 279 SSVAHMNLAMLGIFANNLLGIEGSIHMMVAHGLVSGALFYCVGLLYDRYHTRLVRYYRGL 338 Query: 378 WSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSL 437 M LFF ++ + PG+ NF+ EF++ G + P + +I++ GL+ + YS+ Sbjct: 339 AIYMPLFAIFFLFFTLSNVAFPGSANFIAEFLVFTGLMDINPFLALIASTGLLLTATYSM 398 Query: 438 AMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQ 497 + +R FG S I+ + ++ + F + L +L G P ILD H + Sbjct: 399 WLYNRVCFGATTSYIS--KFNDLTKADTFCLSALAFTTLLFGLKPNLILDLIHLTSMALL 456 >UniRef50_C5C4D6 NADH dehydrogenase (Quinone) n=2 Tax=Micrococcineae RepID=C5C4D6_BEUC1 Length = 999 Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats. Identities = 104/504 (20%), Positives = 187/504 (37%), Gaps = 32/504 (6%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L L + + +G ++ +AL + T A + Sbjct: 1 MLQLLTVHLAVALVGPVLVRLWGRRMFAVLALAPLSAT----------VWALAQTPAVMA 50 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEK---YQGFFHL 118 W+P GI + +D L MV++ G +G L +L F Sbjct: 51 GDAPVVTTSWVPALGIDLSFRLDVLGWFMVLIVGGVGALVLLYCAWYFASGASNLPRFAG 110 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 + G ++G+ + F + FWE+ V Y LI + D K AA + I T Sbjct: 111 VFVAFAGAMLGLVTTDNTFALYAFWELTTVFSYLLIGHYF----DRKVSRRAAMQAIIVT 166 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 GLVML ++ L + +++ EL+ + S + + ++ + K +V Sbjct: 167 TFGGLVMLAGLVMLGELPG-----GSYSLTELVASAPESPLLPIAIVCVLVGAVSKSALV 221 Query: 239 PLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 P H WLP A + APT S A ++K Y + R + + + + L Sbjct: 222 PFHFWLPSAMA-APTPVSAYLHAAAMVKAGVYLVARLAPG--YSTLPAWQWTLLVLASAT 278 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 + G + A Q D+K L+AY +VS +GF+++ + S+ + + AH + A LF+ Sbjct: 279 MILGGYRALRQHDLKLLLAYGTVSQLGFLILLVGQPSRAVALAGLALLGAHAMFKAALFL 338 Query: 358 LCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ- 416 G + TRD+R + GL +L ++ + +G+P +V + L G Sbjct: 339 SVGIVDAAAGTRDLRQLSGLVRTQPFLAVVAGLATASMIGLPPFAGYVAKEAALEGFVHD 398 Query: 417 ---VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVV 473 ++ + G + Y L A+ K +A E+ + +L V Sbjct: 399 GDPTSIMLLAVVVLGSILTVAYGLRFWWGAF--GIKKDLADTEVDREAWPMFAAPTVLAV 456 Query: 474 LLVLLGFYPQPILDTSHSAIGNIQ 497 + G P Sbjct: 457 AGLAAGLVPALGERLLEPFADTYP 480 >UniRef50_A9YMC4 NADH-ubiquinone oxidoreductase chain 4 n=17 Tax=Eumetazoa RepID=A9YMC4_HYDOL Length = 485 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 157/451 (34%), Positives = 250/451 (55%), Gaps = 17/451 (3%) Query: 38 LTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGI-----SIHLAIDGLSLLMVV 92 ++L SL L L + + +Q ++ W+ I ++ +IDGLS+ + Sbjct: 31 ISLFWSLTLLLYFTLFFILNXKLSNFQFSLNINWLLINTIFINWNNLIFSIDGLSIFFIG 90 Query: 93 LTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYF 152 L+ LL + ++ S K I+ + F++ L + +IG+F +D+ F+ +E +L+P++ Sbjct: 91 LSILLIPICIVISLKSIKYFIKEFNILLFLSVILLIGIFSILDILWFYILFEGVLIPIFI 150 Query: 153 LIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLN 212 +I +WG+ + +I AA FF YT L+MLI+I + + T NYE LL Sbjct: 151 MIGIWGY----REEKIKAAFYFFFYTLIGSLLMLISIFKIYSI------TGTTNYENLLI 200 Query: 213 TPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLL 272 + ++ L +GFFI AVK+P++P H WLP AH +AP AGS+ LAGILLK YGL+ Sbjct: 201 IKIPYNIQLWLFIGFFIGLAVKVPMIPFHIWLPQAHVEAPIAGSILLAGILLKLGGYGLI 260 Query: 273 RFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYT 332 RF P+FP AS + P+ + + +I I YGA Q DIKRLIAY+SVSHMG V I I++ Sbjct: 261 RFCYPIFPLASQFYNPLIIIISIIAIVYGALTTCRQIDIKRLIAYSSVSHMGLVTIGIFS 320 Query: 333 GSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFA 392 S G+++ MIAHGLS++GLFI+ +Y R H+R ++ GL M L ++ Sbjct: 321 HSIEGITGSILMMIAHGLSSSGLFIISAIIYFRFHSRIIKYFRGLTITMPILSVITFILI 380 Query: 393 VATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQI 452 +A + P T NF+ E ++ +F+ I ++ G+ +YSL + +R FG S + Sbjct: 381 LANISFPLTLNFIAELFLIISAFKFPLFIILLILMGVFINLIYSLWIYNRIXFGSNSSHL 440 Query: 453 ASQELPGMSLRELFMILLLVVLLVLLGFYPQ 483 E ++ L++L+++LGFYP Sbjct: 441 KFS--RDXINFEYQSLIPLIILIIILGFYPD 469 >UniRef50_Q11VC3 NADH dehydrogenase I chain L n=5 Tax=Bacteroidetes RepID=Q11VC3_CYTH3 Length = 636 Score = 302 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 107/487 (21%), Positives = 202/487 (41%), Gaps = 20/487 (4%) Query: 1 MLLPWLI-LIPFIGGFLCWQTERFGVK-VPRWIALITMGLTLALSLQLWLQGGYSLTQSA 58 M WLI +P +G + + K +IA M + A+ L L + + Sbjct: 2 MEFVWLIPALPLLGFLILSLFNKHIPKSASGYIASAMMLGSFAIVLTLLCKAAGGDLTAT 61 Query: 59 GIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQG--FF 116 + + FD + +++ ID LS+ + + +G L + S + +G + Sbjct: 62 TV----TVFDWIHVGDLKLALSFQIDNLSVWFMSIITGVGFLIHVYSISYMHDDEGVTRY 117 Query: 117 HLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFI 176 L + ++ + + + + F WE + + Y LI W + AA K FI Sbjct: 118 FSYLNLFVFSMLLLVMGSNYVVMFTGWEGVGLCSYLLIGFWFKNQAYND----AAKKAFI 173 Query: 177 YTQASGLVMLIAILALVFVHYNATGVWTFNYEE-LLNTPMSSGVEYLLMLGFFIAFAVKM 235 + L L+ +L + + F+ ++N SG+ + + + F+ K Sbjct: 174 MNRIGDLGFLLGMLLIYNQFKSLEYSVVFDQALKIINPNEPSGIIFAITMLLFVGAMGKS 233 Query: 236 PVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGV 295 +PL+ WLPDA + ++ A ++ Y + R + + + + I +G Sbjct: 234 AQIPLYTWLPDAMAGPTPVSALIHAATMVTAGIYMIARSN--ILYSMAPCTLDIIYVVGT 291 Query: 296 IGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGL 355 A + QTDIK+++AY++VS +GF+ +AI G Y V + H A L Sbjct: 292 GTAILAALIGLTQTDIKKVLAYSTVSQLGFMFMAIGLG---GYSAGVFHVTTHAFFKALL 348 Query: 356 FILCGQLYERI-HTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGS 414 F+ G + + +D+R MGGL K+ + +A G+P F + IL + Sbjct: 349 FLGAGSVIHAMGGEQDIRKMGGLMKKLPITFITFIIATLAIAGIPPLAGFFSKDAILALA 408 Query: 415 FQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAK-SQIASQELPGMSLRELFMILLLVV 473 F+ P+ + F + + Y ML +FG+ + + + L L +++L + Sbjct: 409 FESSPLKWGLGVFAALLTTFYMFRMLFLTFFGEFRGTTHQKEHLHESPLLMTIPLMVLAL 468 Query: 474 LLVLLGF 480 L V+ GF Sbjct: 469 LTVVSGF 475 >UniRef50_A6LXP7 Proton-translocating NADH-quinone oxidoreductase, chain L n=8 Tax=cellular organisms RepID=A6LXP7_CLOB8 Length = 617 Score = 302 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 101/501 (20%), Positives = 203/501 (40%), Gaps = 24/501 (4%) Query: 3 LPWLI-LIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 L W+I + P I + + + IA+ M L+ SL ++ + S Sbjct: 6 LAWMIPVFPAIAFLIIGFITKKSKVISSAIAIGGMVLSFIFSLGVFYEVITSKVSINKPV 65 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQG--FFHLN 119 ++ + I + + ID L+ M+++ +G+L + S ++ +G F N Sbjct: 66 EYAVSWLSA---PIKIEVGVLIDPLTATMLIIVTFIGLLVEIYSLGYMKGEKGFSRFFAN 122 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 L ++G+ ++ + F FFFWE++ + Y LI + + S + A K F+ + Sbjct: 123 LSLFTSSMLGLVISNNYFQMFFFWELVGLCSYLLIGFYYDRPS----AVKANKKAFVANR 178 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 L+ +L L + ++ L F K P Sbjct: 179 VGDFGFLVGMLCLFMAFGTFNFR---ELAASIPAYQDVVYLTIIALLIFAGPVAKSAQFP 235 Query: 240 LHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 LH WLPDA + PT S A ++ Y L R + ++ E + + ++G I Sbjct: 236 LHVWLPDAM-EGPTPVSALIHAATMVAAGVYLLARGYILF--SSLHEVSLVIAYIGGITA 292 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFIL 358 F +A Q D+KR++A++++S +G++++A+ G + + + +H A LF+ Sbjct: 293 FMAGTIAIVQRDLKRILAFSTMSQLGYMVMAMGVG---GFTSGMFHLTSHAFFKALLFLG 349 Query: 359 CGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVV 418 G + I +D+ MGGL KMK + + +++ G+P F + IL +++ Sbjct: 350 AGSIIHSIGVQDIFKMGGLIKKMKLVSITFIIASLSLAGIPPLSGFFSKDEILTVTYEHG 409 Query: 419 PVIT-VISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVL 477 + + + Y ++ +FG+ + + + +++L V V Sbjct: 410 YIFLYYLGLITAFLTAFYMARLVLIVFFGEEREK---HSVHKTPWCMTVPLIILSVFSVF 466 Query: 478 LGFYPQPILDTSHSAIGNIQQ 498 GF + + I + Sbjct: 467 YGFINETFASYIYFQTSQIPE 487 >UniRef50_C9RKX6 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKX6_FIBSS Length = 651 Score = 302 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 106/503 (21%), Positives = 203/503 (40%), Gaps = 27/503 (5%) Query: 5 WLILIPFIGGFLC-WQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQW 63 ++L P I + K A+I GL A + L S + Sbjct: 10 LILLFPLITFVVNGLFLGNKCAKAAAIFAVICNGLAFAAAGTLAFHYFSSDFAPQKAILF 69 Query: 64 QSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQ--GFFHLNLM 121 F +P+I I + +D LS++M+V+ + + + S + + + G F L Sbjct: 70 DHTF-IPFIGDLVARIGMLVDPLSVMMLVVVTFISFMVNIYSIGYMREDRAAGRFFALLS 128 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 ++G+ +A ++F F FWE++ V Y LI W HK S ++A+ + FI T+ + Sbjct: 129 LFSFSMLGLVIATNLFQMFIFWELVGVSSYLLIGFWYHKPS----AVSASKQAFILTRFA 184 Query: 182 GLVMLIAILALVFVHYNATGVW--TFNYEELLNTPMSSGVEY--------LLMLGFFIAF 231 L+ I+ + +V + + + + ++ G+ L + F Sbjct: 185 DSFFLLGIVLVSYVVGSFDFSTLNSLSLIDFQKQFINLGLVTIPKSEALVLGSILIFTGG 244 Query: 232 AVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAM 291 K + P+H WLP+A S+ + ++ Y + R F + M Sbjct: 245 WGKSAMFPMHIWLPNAMEGPTPVSSIIHSATMVVAGVYLVARLFP--FFAICDNALTLIM 302 Query: 292 WLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTG------SQLAYQGAVIQM 345 W+G + + A +A Q DIKR++AY+++S +G+++ A+ + + + + Sbjct: 303 WVGAFTMVFAAVIACTQKDIKRILAYSTLSQLGYMMFALGACKIGQVVAVTGWTASTFHI 362 Query: 346 IAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFV 405 H LF++ G L ++ T D+ MGGL KMK A +L +A G+P F Sbjct: 363 FTHAFFKCSLFLIAGSLIHQVGTNDLDAMGGLGKKMKLTYACTLISILAISGIPPFSGFF 422 Query: 406 GEFMILFGSFQVVPVITV-ISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRE 464 + I+ +FQ + ++ + Y + A+ G + + Sbjct: 423 SKDEIILAAFQGHHYVVFGLALLTSGLTTFYMFRLFFLAFHGAPRHEGVKAGHVHEDFAM 482 Query: 465 LFMILLLVVLLVLLGFYPQPILD 487 I +L + +L G + I + Sbjct: 483 TLPIAILAIPALLSGVLGKGIFE 505 >UniRef50_B8FRJ9 Proton-translocating NADH-quinone oxidoreductase, chain L n=11 Tax=Firmicutes RepID=B8FRJ9_DESHD Length = 651 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 109/487 (22%), Positives = 195/487 (40%), Gaps = 24/487 (4%) Query: 4 PWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQW 63 + +PF+ L + ++ I+++ + + LS+ + L S +Q P Sbjct: 13 WLIPFLPFLSFLLIALVTKRSKRLSSTISILAILTSFGLSIAIGLGVIQSGSQIVENPVL 72 Query: 64 QSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQG--FFHLNLM 121 + + I I ID +S +M+ + L+ + + S + G ++ Sbjct: 73 TTV-NWLSIGGLHIDFGTLIDPMSAMMLFVVTLVASMVQIYSIGYMHGDPGFSRYYAFQS 131 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 ++G+ LA ++ F FWE++ + Y LI W K S AA K FI T+ Sbjct: 132 LFAASMLGMVLATNLLQLFIFWELVGLCSYLLIGFWFFKVS----AREAAKKAFITTRVG 187 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPM-------SSGVEYLLMLGFFIAFAVK 234 +L+ IL L + + T ++ + FI K Sbjct: 188 DFGLLLGILFLYNTFGTLDFYGPGSLSVQMATSFHDFALIGGVSYLTIMAILVFIGPVGK 247 Query: 235 MPVVPLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWL 293 PLH WLPDA + PT S A ++ Y + R LF NAS + + Sbjct: 248 SGQFPLHVWLPDAM-EGPTPVSALIHAATMVVAGVYLVARMFF-LFDNASPFALQLVAGM 305 Query: 294 GVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAA 353 G + A +A AQ DIKR++AY+++S +G+++ A+ GS ++ ++ H A Sbjct: 306 GAFTAIFAATIAIAQDDIKRILAYSTLSQLGYMMFALGVGS---LTASMFHLMTHAFFKA 362 Query: 354 GLFILCGQLYER-IHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILF 412 +F+ G + H +++ MGGLW KM +A G+P F + IL Sbjct: 363 LMFLGAGSVIHALHHKQNIWDMGGLWKKMPITGTTFFIGVLAIAGIPPFAGFFSKDEILL 422 Query: 413 GSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLV 472 ++ P+I + F + Y + A+ G+ K + +++L Sbjct: 423 AAYHGHPIIFAVGLFTAFLTAFYMSRLFFVAFMGEEKPE---NHPHESPWVMTLPLIILA 479 Query: 473 VLLVLLG 479 V+ G Sbjct: 480 FFSVVGG 486 >UniRef50_B2A693 Proton-translocating NADH-quinone oxidoreductase, chain M n=2 Tax=Clostridia RepID=B2A693_NATTJ Length = 499 Score = 301 bits (773), Expect = 3e-80, Method: Composition-based stats. Identities = 114/506 (22%), Positives = 225/506 (44%), Gaps = 26/506 (5%) Query: 5 WLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQ 64 ++LI F+ + +++L M L L +++ L ++ + + + + Sbjct: 10 IIVLIGIFVSFILPGLHFIKKNLNEYVSLSAMILMLVIAIYLVIEVSSNGPFTYVVGE-- 67 Query: 65 SEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQ-----GFFHLN 119 W P +GI + +D L + M ++ +G LA+L + +++ ++ Sbjct: 68 ------WAPPWGIEFN--VDYLGVYMTLIITGIGFLALLYASRDLHHELQENALSLYYPL 119 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 M ++ +IG+ L D+F F E+ L+ +I + + K I A+ K+ + Sbjct: 120 YMLLMASMIGMVLTNDIFNLFVLLEITLLTSVAIICV-----KENKDTIEASLKYLMLNA 174 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 +L+ I L + + + E +N V ++ FF+ F VK + P Sbjct: 175 LGSATVLMGIALLYIITGHLNMTY-IAQELAVNFEQYPTVIMAIVALFFVGFGVKSALFP 233 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAP---IAMWLGVI 296 +H WLPDAH AP+ S L+G+++K L+RF + P E P I +W Sbjct: 234 MHVWLPDAHGSAPSPSSAVLSGLVIKVYVVSLIRFYFIVLPEEILELMPVGEILLWFAAA 293 Query: 297 GIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLF 356 G+ G+ A AQ DIK+++AY+SV+ + +V + I S ++QG ++ ++ H + + LF Sbjct: 294 GMILGSMFAIAQEDIKKMLAYSSVAQISYVFLGIGLLSLTSFQGGLLHILNHAIIKSMLF 353 Query: 357 ILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ 416 ++ G + R + M G+ + + A A +G+PGT F+ ++ + G+ Sbjct: 354 LIAGAIIYTSGIRKISHMHGVGLRYPLIMICFTLGAFAMIGIPGTNGFISKWYLALGALD 413 Query: 417 VV-PVITVISTFGLVFASVYSLAMLHRAYFGKAKS-QIASQELPGMSLRELFMILLLVVL 474 P ++ + VY L ++ ++FG + I + + + F I+L L Sbjct: 414 AGRPFFVLVILVSSLLNGVYYLPIVVNSFFGDMQDADINFIKCNKLPWQMFFPIVLCGFL 473 Query: 475 LVLLGFYPQPILDTSHSAIGNIQQWF 500 ++ +G YP L A+ + Sbjct: 474 IIFIGLYPALPLSLVEPAVEFLMPEL 499 >UniRef50_B0BZT2 Proton-translocating NAD(P)H-quinone oxidoreductase, chain L n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0BZT2_ACAM1 Length = 671 Score = 301 bits (773), Expect = 3e-80, Method: Composition-based stats. Identities = 103/487 (21%), Positives = 197/487 (40%), Gaps = 28/487 (5%) Query: 5 WLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQ 64 + L P I + WI+++T + A++L Q+ Sbjct: 7 LIPLFPLIAFAVNLFFGHRLGSFSGWISVLTSVASSAIALPAAWVVAQG-------GQYS 59 Query: 65 SEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI--EKYQGFFHLNLMW 122 E+ + + ++ +D LS ++ + ++G L + S + EKY F + Sbjct: 60 HEWLWLTLGNYDLNFGYLLDPLSATLLFVVTVIGTLIQVYSIGYMHGEKYYHRFFAYVSL 119 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 + ++ + +A + +F WE+M + Y LI + HK S A+ K F+ T+ Sbjct: 120 FMAAMLTLVIANNYVQYFMAWEVMGLCSYLLIGFYFHKDSAAN----ASRKAFLTTRVGD 175 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 + + + I+ L + V N + + +L F K PLH Sbjct: 176 VGLFLGIMTLFVTGGTLSFVDLPN-----AVETGAPLLWLAAPLIFCGTVGKSAQFPLHV 230 Query: 243 WLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 WLPDA + PT S A ++ Y + R + + P M +G + F Sbjct: 231 WLPDAM-EGPTPVSALIHAATMVAAGVYLVARSFVLF--TSFPMVMPWVMGIGTLTAFMA 287 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 A++A TDIK+++A++++S +G+++ A+ G ++ H A LF+ G Sbjct: 288 AYIALTATDIKKVLAFSTISQLGYMVTAMGLG---GMTAGTFHLMTHAFFKALLFLGAGS 344 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 + H +D+R +GGL+SKMK A + ++A G+P F + IL ++Q + Sbjct: 345 VIHGAHEQDIRQLGGLFSKMKHTGATFVIASLAIAGVPPLSGFWSKDEILLEAYQEGHFV 404 Query: 422 TV-ISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF 480 + + Y ++ +FGKA++ + L + + +G Sbjct: 405 VYGVLLLTAFMTAFYMFRLVFMTFFGKARNPEI--HAHESPALMTVPLWCLAIGAIFVGI 462 Query: 481 YPQPILD 487 P +D Sbjct: 463 PGSPFMD 469 >UniRef50_B0VE74 pH adaptation potassium efflux system transmembrane protein n=22 Tax=cellular organisms RepID=B0VE74_ACIBY Length = 949 Score = 301 bits (772), Expect = 4e-80, Method: Composition-based stats. Identities = 107/491 (21%), Positives = 207/491 (42%), Gaps = 28/491 (5%) Query: 13 GGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWI 72 G L +RF V A+ + L L + + W+ Sbjct: 17 GTTLVSLLQRFSRGVTALGAIGVSLTSFGLLL---------TQAKTVLGGASIQQSWDWL 67 Query: 73 PRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI--EKYQGFFHLNLMWILGGVIGV 130 P+ GI++ +D L LL +L +G L + ++ + + +L LM + ++G+ Sbjct: 68 PQLGINLSFRLDALGLLFSLLITGIGTLIYIYAYYYLGPKNSLSKLYLLLMLFMAAMLGI 127 Query: 131 FLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAIL 190 L+ ++ + FWE+ + + L+ W H + + A T GL ML + Sbjct: 128 SLSNNLIILLVFWELTSISSFLLVGYWSHYEAAQRGSRMA----LTITGMGGLAMLGGFV 183 Query: 191 ALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQ 250 L + + + + S + +L + K P H WLP+A + Sbjct: 184 LLGQITGTYEIN---DIVGMKDLIQSHYLFVPTLLLILLGAFTKSAQFPFHFWLPNAMA- 239 Query: 251 APTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQT 309 APT S + ++K + L R + A + I ++G+ + A A + Sbjct: 240 APTPVSAYLHSATMVKAGIFLLARLAPIFIGAAL--YHNIVTFVGLFTLCMAACFAIFKE 297 Query: 310 DIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTR 369 D+K L+AY+++SH+G ++ + GS LA A+ +I H A LF++ G + TR Sbjct: 298 DLKGLLAYSTISHLGLIVCLLGIGSPLAVAAAIFHIINHATFKAALFMIAGIIDHETGTR 357 Query: 370 DMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSF-----QVVPVITVI 424 D+R + G+W + + L++ A + G+P T F+ + M V ++I Sbjct: 358 DLRKLSGIWQLLPFTATLTMITAASMAGVPLTNGFISKEMFFTELLASLSGSTVIFASII 417 Query: 425 STFGLVFASVYSLAMLHRAYF-GKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQ 483 +T +FA YS+ ++H +F G Q+ ++ + +LL L +L+G +P Sbjct: 418 ATLAGIFAVSYSIRLVHGVFFDGPVGKQVPNKNAHEPPIGMRAPAILLATLCILVGIFPA 477 Query: 484 PILDTSHSAIG 494 +++ +++ Sbjct: 478 LLVEPLVNSVT 488 >UniRef50_C5NVG1 Na(+)/H(+) antiporter subunit A n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NVG1_9BACL Length = 788 Score = 301 bits (772), Expect = 4e-80, Method: Composition-based stats. Identities = 106/516 (20%), Positives = 203/516 (39%), Gaps = 38/516 (7%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L + +P I F + + + + L L G + Sbjct: 1 MLQLAVFLPVIAMFFVPFFRKNFKTIHTG--------KFVIVVPLILFGYFISNLKYIYS 52 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI---EKYQGFFHL 118 + ++ G+ I+L +DGLSLL +L +G L +L S + ++ F++ Sbjct: 53 GGTIYKKLAFVSNVGLDINLNLDGLSLLFSLLITGIGTLVILYSCYYMSITDEKLHKFYI 112 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 L+ + ++GV L+ +M + FWEM V + LI+ W + K A K I T Sbjct: 113 FLLIFMSAMLGVVLSDNMLSMYMFWEMTSVSSFLLISYWHENDASRK----GALKSLIIT 168 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 G++ML I L + + E + + M+ K Sbjct: 169 VFGGVLMLAGIFILNNITGSFNVS---EIIEFTKNHGYNDKYVVAMILIIFGAFTKSAQF 225 Query: 239 PLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 P H WLPDA + S + ++K Y LLR + + ++ F I + G I + Sbjct: 226 PFHIWLPDAMAAPTPISSYLHSATMVKAGIYLLLRIGIVF--SFTSSFGNILIIFGTITM 283 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGS-----------QLAYQGAVIQMIA 347 G+ A D+K ++AY+++S +G + + I + A+ +I Sbjct: 284 LIGSISAIFLKDLKGILAYSTISQLGMMTLMIGIANLGLYNDNHYVYTFAFYAVCFHIIN 343 Query: 348 HGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGE 407 H A LF++ G + H+RD+ + G+ M LS+ + G+P F + Sbjct: 344 HAAFKASLFMITGIIDHSFHSRDIEKLRGIKRYMPLSFILSIIAGFSMAGIPPLSGFYSK 403 Query: 408 FMILFGSFQV------VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQ-IASQELPGM 460 L + + +I + G + ++YSL + + + GK + + +++L Sbjct: 404 EYFLTVVYGLTQSSMLYMIIVIAVVIGALGTAIYSLIVAFKPFLGKFDNSILGNKKLHLP 463 Query: 461 SLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNI 496 S ++LVV +++ F I+ + + + Sbjct: 464 SNGIFISPIILVVFVIINTFIKDYIVIPAQQSALAV 499 >UniRef50_D2S7T6 NADH dehydrogenase (Quinone) n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S7T6_9ACTO Length = 948 Score = 300 bits (770), Expect = 6e-80, Method: Composition-based stats. Identities = 92/425 (21%), Positives = 177/425 (41%), Gaps = 19/425 (4%) Query: 40 LALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGV 99 L + + G + + W+P +S L +DGL+ L ++ +GV Sbjct: 31 LLAAGFAGVGGLLATGAPTVLDGGAVTASWTWLPSLQVSFALRLDGLAGLFCLIVLGVGV 90 Query: 100 LAVLCSWKEIEK--YQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALW 157 L + S + + G + L G ++G+ LA D+ L + FWE+ V + LI Sbjct: 91 LIMAYSPRYMGDSSRNGVVYGLLTLFAGAMLGLVLAADVVLLYVFWELTTVCSFVLIG-- 148 Query: 158 GHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSS 217 + G+ + + + T A GL +L+A++ L V + ++S Sbjct: 149 ----TAGQVAVKPGRRALLITAAGGLALLLAVIMLSVVVGTTDLAT---ILAERDQVLAS 201 Query: 218 GVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLP 277 + + + A K +PLH WLP A + A ++K Y L+R + Sbjct: 202 PLAWPIGALIATAAFTKSAQLPLHFWLPGAMVAMTPVSAYLHAATMVKAGIYLLMRTTPL 261 Query: 278 LFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLA 337 ++ + + +G+ GA+MA + D+K ++A+++VS +G ++ I G+ +A Sbjct: 262 F--ADQPAWSALLITVGLASAVAGAFMALREHDLKAILAHSTVSQLGLLIAVIGVGTPVA 319 Query: 338 YQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLG 397 A++ AH L A LF+L G + + +RD+R + GL M ++ A++ G Sbjct: 320 LAAAMLHTFAHALFKATLFMLVGIIDKETGSRDIRELSGLRRVMPVTATVTGLAALSMAG 379 Query: 398 MPGTGNFVGEFMILFGSFQ------VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQ 451 +P FV + + G Q V + Y + +++ A+ G + Sbjct: 380 VPPMLGFVSKEYLFQGLLQADFAPWAGAVAGALGVTASALTFAYGMRIVYGAFGGPTRQP 439 Query: 452 IASQE 456 + Sbjct: 440 DLYEP 444 >UniRef50_Q28L00 NADH dehydrogenase (Quinone) n=1 Tax=Jannaschia sp. CCS1 RepID=Q28L00_JANSC Length = 782 Score = 300 bits (770), Expect = 7e-80, Method: Composition-based stats. Identities = 94/461 (20%), Positives = 184/461 (39%), Gaps = 18/461 (3%) Query: 40 LALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGV 99 +++ + L ++ A + W+P + + + IDGLSL +L +G Sbjct: 19 MSVVVPAALFLWFAQFLPAVAAGETPLIGIDWVPSMDVRLEMLIDGLSLTFALLITGIGT 78 Query: 100 LAVLCSWKEIEKYQ--GFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALW 157 L L S + + + F L L+ + G++G+ LA ++ F FWE+ + Y LI Sbjct: 79 LVTLYSTRYLGNHPEYPRFVLYLLTFMVGMLGLVLADNLIALFVFWEVTTISSYLLIGF- 137 Query: 158 GHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSS 217 SD +A + + T GL +L ++ L + + + Sbjct: 138 ---TSDSAKSRRSALQALLVTGTGGLALLAGMILLGAAAGTYSLT---EIRGMGDAIRQH 191 Query: 218 GVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSL 276 + +++ F K P H WLP+A + APT S + ++K Y + R + Sbjct: 192 DLYIPILILFLAGAFTKSAQFPFHFWLPNAMA-APTPVSAYLHSATMVKGGVYLMARMNP 250 Query: 277 PLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQL 336 L + + + G + + +A QTDIK+++AYT++ +G + + I GS Sbjct: 251 TL--GGTEPWFWALVIAGGFTTVFASVLAIRQTDIKQVLAYTTLMALGALTLFIGAGSSD 308 Query: 337 AYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATL 396 A + A++ ++ H L A LF++ G + + TR++ + GL KM A++ Sbjct: 309 AIKAAMLFLVVHSLYKAALFLMIGIVDNQTGTREVAHLRGLARKMPITFFAGALAAISMA 368 Query: 397 GMPGTGNFVGEFMILFGSFQ---VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIA 453 G+P F+G+ + + I V V + + R + G+ + Sbjct: 369 GIPPFVGFIGKEFLYKAGLEIDTAGLWIIGTIFAASVLMFVAAGISVARPFLGRLPDRF- 427 Query: 454 SQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIG 494 ++ + ++L L + G + Sbjct: 428 -KDTTEGPISMWLGPIILGALSLYFGIFADIPEVWLVGPAT 467 >UniRef50_C1F220 NADH dehydrogenase I, L subunit n=2 Tax=Bacteria RepID=C1F220_ACIC5 Length = 687 Score = 300 bits (769), Expect = 8e-80, Method: Composition-based stats. Identities = 116/522 (22%), Positives = 196/522 (37%), Gaps = 47/522 (9%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 LL + +P + L R +A+ ++G++L LSL +Q + + Sbjct: 4 LLWLIPALPMLAAALIALMPRQRRVPAAALAIGSLGISLLLSLVALVQTIANPVRQVYNF 63 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQG--FFHLN 119 W +F W + + +D L +M+V+ +G+L + S + + F Sbjct: 64 NW-LQFGSQW-----VQLGWILDPLCAVMLVMVTFVGLLIFIYSLGYMAHDENFTRFFCF 117 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 L G ++GV LA + L F WE++ + Y LI W HK S FI T+ Sbjct: 118 LALFAGAMLGVVLANSLLLLFMCWEIVGLTSYLLIGFWFHKPSAAAAAKK----AFITTR 173 Query: 180 ASGLVMLIAILALVFVHYNATGVWT---------FNYEELLNTPMSSGVEYLLMLGFFIA 230 L +L+ ++ L T V + L F Sbjct: 174 IGDLGLLLGMVWLYASSGTLLFYNNGAGCLEHSALAAMVTQTTLAGMAVSTAIALLLFCG 233 Query: 231 FAVKMPVVPLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPL----FPNASAE 285 A K VPLH WLPDA + PT S A ++ Y + R + P+ + Sbjct: 234 AAGKSGQVPLHVWLPDAM-EGPTPVSALIHAATMVAAGVYLIARVYPLMAAAATPHTISA 292 Query: 286 FAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQM 345 + W+G I F+ A +A AQ DIKR++AY++VS +G++++ + G + + Sbjct: 293 ALQVVAWVGAITAFFAACIAVAQNDIKRILAYSTVSQLGYMMLGLGVG---GVAIGMFHL 349 Query: 346 IAHGLSAAGLFILCGQLYE-RIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNF 404 I H A LF+ G + +D+R MGGL M + +A G P F Sbjct: 350 ITHAFFKALLFLGAGSVIHGCTEEQDIRNMGGLRRFMPITFVTYMCGMLALCGFPLFAGF 409 Query: 405 VGEFMILFGS--FQVVPVITVISTFGLVFASVYSLAMLHRAYFGK--------------A 448 + IL + + + + G + + Y + +FG Sbjct: 410 WSKDEILHAAHGWPISLGPFYLGAAGALLTAFYMTRQVCYVFFGPRRLPEATADLSSPRP 469 Query: 449 KSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSH 490 ++ +++L + VLLGF P Sbjct: 470 PEACVIRDPHESPAVMTVPLIVLALFAVLLGFISTPAWPWFS 511 >UniRef50_B1WQD4 NADH dehydrogenase subunit 5 n=9 Tax=Cyanobacteria RepID=B1WQD4_CYAA5 Length = 682 Score = 300 bits (769), Expect = 9e-80, Method: Composition-based stats. Identities = 106/541 (19%), Positives = 197/541 (36%), Gaps = 63/541 (11%) Query: 4 PWLILIPFIGGFLCWQ-TERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 + ++P +G + F R + + L + L +Q G Sbjct: 9 WLIPVLPLLGAMVVGLGLISFNQVTNRLRQANAVFIISLLGASMVLSFALLWSQIQGHET 68 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQG--FFHLNL 120 + + F + + +D LS LM V+ + L ++ + + G F+ L Sbjct: 69 YTRMIEWAAAGNFHLQMGYTLDHLSALMCVIVTTVAFLVMVYTDGYMAHDPGYVRFYAYL 128 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 ++G+ ++ ++ + FWE++ + Y LI W D K A K F+ + Sbjct: 129 SIFSASMLGLVISPNLVQVYIFWELVGMCSYLLIGFWF----DRKAAADACQKAFVTNRV 184 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEE--LLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 +L+ +L + + E + + ++ + L + F+ K Sbjct: 185 GDFGLLLGMLGIYWATGTFEFDLMGERLESLVSSGMIAPALAGLFAVLVFLGPVAKSAQF 244 Query: 239 PLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 PLH WLPDA + PT S A ++ + + R P +A I W G + Sbjct: 245 PLHVWLPDAM-EGPTPISALIHAATMVAAGVFLVARMYPVFEPIPTA--MTIIAWTGAVT 301 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 F GA +A Q DIK+ +AY+++S +G++++A+ G AY + ++ H A LF+ Sbjct: 302 SFLGATIALTQNDIKKGLAYSTISQLGYMVMAMGIG---AYTAGLFHLMTHAYFKAMLFL 358 Query: 358 LCGQLYERIH---------TRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEF 408 G + + +DMR+MGGL M L +A G+P F + Sbjct: 359 CSGSVIHGMEGVVGHDPVLAQDMRLMGGLRKYMPLTSLAFLVGTLAICGIPPFAGFWSKD 418 Query: 409 MILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAK------------------- 449 IL +F+ P + ++ F + Y M + G + Sbjct: 419 EILGLAFEANPALWLVGWFTAGLTAFYMFRMYFMTFEGDFRGNDMDIRNELSMAAAPVFG 478 Query: 450 -------------------SQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSH 490 S L +L+L + ++G +P +T Sbjct: 479 PGAMDVKELDHDTEDHGHDDHGHSDSPHESPLTMTLPLLILAIPSTVIGLLGKPWDNTFE 538 Query: 491 S 491 S Sbjct: 539 S 539 >UniRef50_A0QQR3 NADH ubiquinone oxidoreductase subunit 5 n=9 Tax=Actinomycetales RepID=A0QQR3_MYCS2 Length = 993 Score = 300 bits (769), Expect = 9e-80, Method: Composition-based stats. Identities = 109/512 (21%), Positives = 202/512 (39%), Gaps = 41/512 (8%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L L+ R+G ++L+ +G + ++L + P Sbjct: 35 MLAVLLAHAVATALAPLMVARWGRMAFFPLSLVPLGSLVWVAL------------NWPSP 82 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF------ 115 + W+P + L D L+ +M VL +G L + + G Sbjct: 83 DNIPTVHVSWVPELWMDFTLRFDALAAIMSVLVLAIGALVLFYCAHYFHHHDGRMEKRLP 142 Query: 116 -FHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKF 174 F L+ G + G+ ++ +M + + FWE V + L+ + ++ T AAT+ Sbjct: 143 SFAAELVAFSGAMFGLVVSDNMLVLYIFWETTTVLSFLLVGHY----AERATSRRAATQA 198 Query: 175 FIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVK 234 + T GL ML I+ L T+ EL+ P + + + I K Sbjct: 199 LLVTTFGGLAMLTGIVVLG------NMAGTYLLSELIAAPPTGTAASVGIALILIGALSK 252 Query: 235 MPVVPLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWL 293 +VP+H WLP A + APT S A ++K Y + R + +A + P+ + L Sbjct: 253 SAIVPMHFWLPGAMA-APTPVSAYLHAAAMVKAGVYLIARMTPGF--ADTAFWRPMVIGL 309 Query: 294 GVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAA 353 G++ + W A + D+K ++A+ +VS +G + + + G + +IAH + A Sbjct: 310 GLLTMLLAGWRAVREYDLKLILAFGTVSQLGLITVMVGAGGPDMMLAGLAMLIAHAMFKA 369 Query: 354 GLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFG 413 LF++ G + TRD+R + GL + L ++L + +P FV + L Sbjct: 370 SLFMVVGVIDHATGTRDIRRLAGLGRAHRPLLIIALGAVASMAALPPFFGFVAKEADLET 429 Query: 414 SFQ------VVPVITVISTFGLVFASVYSLAMLHRAYFGK--AKSQIASQELPGMSLREL 465 P + G VF ++YSL L A+ GK + + E+ + L Sbjct: 430 VLHSPALGTAAPYVLTGIVVGSVFTTIYSLRFLWGAFAGKGLSGPSVRVAEMHRPPVNFL 489 Query: 466 FMILLLVVLLVLLGFYPQPILDTSHSAIGNIQ 497 +L ++ G +P+ + + Sbjct: 490 LAPAILSAAGLVFGLWPKGLDAVLEDYADTVP 521 >UniRef50_C7MG69 NADH:ubiquinone oxidoreductase subunit 5 (Chain L)/multisubunit Na+/H+ antiporter, MnhA subunit n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MG69_BRAFD Length = 981 Score = 300 bits (769), Expect = 9e-80, Method: Composition-based stats. Identities = 111/515 (21%), Positives = 193/515 (37%), Gaps = 29/515 (5%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 + L+ + R G +A++ L L + Sbjct: 5 VFTMLLAHLVAALVGPFLVRRIGRNAFYPLAVVPGASALWLL----------TLDPRALA 54 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQ---GFFHL 118 +PWIP FGI + +D LS ++ ++ +G + ++ + + + G F Sbjct: 55 DAPRVESVPWIPAFGIDLAFRLDTLSWVLTLIATAIGAVVLVYCARYFKDTEPGLGRFAG 114 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 L G ++G+ LA D+ + + FWE+ V Y L+ + D + AA I T Sbjct: 115 VLTAFAGAMVGLVLADDVMMIYTFWELTTVFSYLLVGHY----QDRQASRRAALNALIST 170 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 A GL ML+ +L + + + M + K +V Sbjct: 171 TAGGLAMLVGLLMVAASAGSFRLSEIVIDPMWQSA---GPYLLTAMALILVGATSKSALV 227 Query: 239 PLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 P H WLP A + APT S A ++K Y +LR + L I LG Sbjct: 228 PTHFWLPGAMA-APTPVSAYLHAAAMVKAGVYLILRMAPALTH--LEIVTMILAGLGAAT 284 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 + G W A QTDIK L+AY +VS +GF+ + A + +IAH + A LF+ Sbjct: 285 MLVGGWRALRQTDIKLLLAYGTVSQLGFLAAVAGLATHDAVFAGLAMLIAHAVFKAPLFM 344 Query: 358 LCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSF-- 415 + G + ++ TRD+R++ G+ + + A + +P FV + I + Sbjct: 345 VVGIIDKKFGTRDLRVLSGVGRAAPVVAVIGTLSAASMAAVPSLYGFVAKESIYTALWVA 404 Query: 416 -QVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVL 474 ++ + G V YS +H A+ E P +++ L+ V Sbjct: 405 GGWQRLLLLSLVAGSVLTVAYSWRFVHGAF--GIAPGAPRVETPRIAVLYWLPPALVAVF 462 Query: 475 LVLLGFYPQPILDTSHSAIGNIQQWFVNSVTTTRP 509 + L P+ + + G + + P Sbjct: 463 SIGLAVAAGPLEEVLRAGAGVLPENGSEVHLAVIP 497 >UniRef50_C8XH11 NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XH11_NAKMY Length = 956 Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats. Identities = 112/479 (23%), Positives = 199/479 (41%), Gaps = 20/479 (4%) Query: 33 LITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVV 92 L L + L + + + W+P ++I L +D L++ + + Sbjct: 32 LGRGALIVLALLPAATTVWAAAMLPSVMNGGALTSSTRWVPALDLAIDLRMDALAMALTL 91 Query: 93 LTGLLGVLAVLCSWKEI---EKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVP 149 + +G+L +L S + + + +L+ G ++G+ A ++ L WE+ + Sbjct: 92 IIAFIGMLVLLYSARYFPADDDGLSKYSGSLVAFAGAMLGLVWANNLILLVVCWELTGIL 151 Query: 150 MYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEE 209 Y LIA + K+ TAA++ + T A GLVMLI + L T TF E Sbjct: 152 SYLLIA----HRAGKKSSRTAASQALMVTTAGGLVMLIGAVMLG------TLAGTFTISE 201 Query: 210 LLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAY 269 +L P S + + +L + K +VP WLP A + A + A ++K Y Sbjct: 202 ILAAPPSGPLVTVSVLLLIVGGISKSAIVPFQFWLPGAMAAPTPASAYLHAATMVKAGIY 261 Query: 270 GLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIA 329 LR + + P+ + LG + +GA +A Q D+K L+AY +VS +G + + Sbjct: 262 LFLRLAPAF--ATLPVWQPVLIALGGGTMLFGAVLALRQRDLKLLLAYGTVSQLGLMTLV 319 Query: 330 IYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSL 389 I TG+ A G + +IAH A LF G + TRD+ + GL +M L L++ Sbjct: 320 IGTGNPDALLGGLAMLIAHATFKAPLFFTVGIIDTTTGTRDLTKLSGLGRRMPLLATLAV 379 Query: 390 FFAVATLGMPGTGNFVGEFMILFGSFQ---VVPVITVISTFGLVFASVYSLAMLHRAYFG 446 A++ G+P F + G + V V+ G + YS + A+ Sbjct: 380 LSALSMAGIPPMLGFAAKEADYAGLLEGGTGGYVAVVVMALGSAITTAYSARFIWGAF-- 437 Query: 447 KAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNSVT 505 AK + + + S + + +V + ++LG P + S ++ Sbjct: 438 AAKKDVPAADPAPTSAFMVGPTMAMVAIGLVLGIAPGLLEPLLQSYAQTAGPTHPGAMA 496 >UniRef50_C7RLG1 Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RLG1_9PROT Length = 504 Score = 299 bits (767), Expect = 1e-79, Method: Composition-based stats. Identities = 160/494 (32%), Positives = 242/494 (48%), Gaps = 19/494 (3%) Query: 13 GGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWI 72 G L V + R +A I T+ + L + ++Q PW Sbjct: 26 GAALLSLLPTRSVDLMRHLASIVAAATMLCACLLVADFDPAG------AEFQFFETRPWN 79 Query: 73 PRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFL 132 PR G + L +DG+SL MVVL LL +A++ S I + L+ + ++ VF Sbjct: 80 PRVGSHLALGLDGISLPMVVLATLLSFVAIVSSTG-IRSGARLYFSLLLVLETSLLIVFT 138 Query: 133 AIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILAL 192 A D LF+ WE+ L+P++FLI G G R AA F +YT + MLIA+L L Sbjct: 139 ARDWSLFYVCWELTLIPLFFLIDRLG-----GANRHRAALNFVLYTLGGSVFMLIALLLL 193 Query: 193 VFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAP 252 + + + L+ LG + F VKMP+VPLHGWLP AH +AP Sbjct: 194 Y--DAAPGHSFAMADMAAGGAELPVKTQILVFLGLLLGFGVKMPIVPLHGWLPLAHVEAP 251 Query: 253 TAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIK 312 + S+ L+GILLK AYGL+R + L P A L +I + YGA +A+ QTD+K Sbjct: 252 SPISILLSGILLKMGAYGLIRAAATL-PAAVQALQDWLALLALISLLYGAVLAWRQTDLK 310 Query: 313 RLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMR 372 +IAY+S+SHMG VL+ I + GAV QM+AHGL+A LF+L G LYER HTRD+ Sbjct: 311 AMIAYSSISHMGVVLLGIAALNPAGLSGAVTQMVAHGLAAGLLFLLIGLLYERTHTRDLG 370 Query: 373 MMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFA 432 G L +F +A++G+PG+ F+ E +L G++ V+ + G++ + Sbjct: 371 AYGSLNRSAPRFAVAIVFTLLASVGLPGSAGFMAELQVLVGAYARWGGWLVLLSIGILIS 430 Query: 433 SVYSLAMLHRAYFGKAKSQIASQ----ELPGMSLRELFMILLLVVLLVLLGFYPQPILDT 488 + Y+L + G + + + E LL+ ++ +GFYP P+L Sbjct: 431 AAYALRAIRCLSTGPERPFAGAAAGVTAFADLKRSESAAAGLLIAGILGIGFYPAPLLSL 490 Query: 489 SHSAIGNIQQWFVN 502 S++ + + Sbjct: 491 MASSVARLVRQVGA 504 >UniRef50_C6CN10 NADH/Ubiquinone/plastoquinone (Complex I) n=15 Tax=Gammaproteobacteria RepID=C6CN10_DICZE Length = 679 Score = 298 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 106/531 (19%), Positives = 203/531 (38%), Gaps = 47/531 (8%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L + + G R R L + A L +A Sbjct: 14 LGLSLALYLAGALFSLLCCRRESLAIRLSGLCALAGGCAGVLAAAPVLLGGGALTAIFDG 73 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF----FHL 118 F + L D L+ M ++ LL ++ L S +E+Y+G Sbjct: 74 PFDAF---------AHLTLRFDTLAAFMTLVISLLVTVSALYSLAYLEEYRGRGAWAMGF 124 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 + + ++ + + + F F +E+M + YFL+ A ++A +F+ Sbjct: 125 FMNLFVASMVALVVVDNAFYFIVLFEVMSLSSYFLVI-----ADQDDEAVSAGLLYFLIA 179 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 A ++++ A L + ++ + + +S+ ++ L F F K ++ Sbjct: 180 HAGSVLIMAAFFLLYR------HSASLDFADFRHASLSAPQASVVFLLAFFGFGAKAGML 233 Query: 239 PLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 PLHGWLP AH AP+ S ++G+++K +G+++ + L + + + G + Sbjct: 234 PLHGWLPRAHPAAPSHASALMSGVMVKIGVFGIIKVGIDLLGATETWWGVVVLAFGAVSS 293 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTG-----------SQLAYQGAVIQMIA 347 G A A+ DIKRL+AY +V ++G +L+ + G + L G + ++ Sbjct: 294 VLGVLYALAEHDIKRLLAYHTVENIGIILMGVGVGMIGIATHHPLLALLGLLGGLYHLLN 353 Query: 348 HGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGE 407 H + LF+ G + R+HT+DM MGGL M L +A +P FV E Sbjct: 354 HAVFKGLLFLGAGAVIYRVHTKDMEKMGGLARLMPRTALAFLVGCMAISALPPLNGFVSE 413 Query: 408 FMILFGSFQ-----------VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQE 456 + F P+ V+ A++ + + ++ G +S+ + Sbjct: 414 WFTYQSLFTLSHDGGIGLRLAAPIAIVMLAITGALAAMCFVKVYGISFCGAPRSE-KATH 472 Query: 457 LPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNSVTTT 507 + +LLL +L VLLG + ++ Q ++ Sbjct: 473 AREVPWPMTVAMLLLALLCVLLGIGASVVSPIITRIAADLAQTPAVAMAQG 523 >UniRef50_B1KJV8 Proton-translocating NADH-quinone oxidoreductase, chain L n=2 Tax=Shewanella RepID=B1KJV8_SHEWM Length = 622 Score = 298 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 115/476 (24%), Positives = 200/476 (42%), Gaps = 29/476 (6%) Query: 21 ERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIH 80 + + +++ LA+SL + L + QW + I + +S Sbjct: 24 PKVATTQVIGVGSVSLAALLAVSLNIALWDQTQFVLQTSLGQWLT------IDKLSLSFT 77 Query: 81 LAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQG--FFHLNLMWILGGVIGVFLAIDMFL 138 L +D LSL+M+ + +G L L S +++ F + L + ++ + LA ++ L Sbjct: 78 LYLDPLSLVMITIITCIGALIHLYSASYMKEDADICRFFVYLNLFVSAMLFLVLADNLIL 137 Query: 139 FFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYN 198 + WE + + Y LI W + + AA K FI T+ MLI I+ + + Sbjct: 138 LYLGWEGVGLCSYLLIGFWYREVKNS----QAANKAFIITRIGDTAMLIGIILIFYQFDT 193 Query: 199 AT------GVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAP 252 L T + G+ L L F A K VPLH WLPDA + Sbjct: 194 LNIQQIQAHSQQLLQNSELLTKGAVGLTSLCCLLLFAGAAGKSAQVPLHSWLPDAMAGPT 253 Query: 253 TAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIK 312 ++ A ++ Y + R ++ LF + + + +GVI + GA A AQTD+K Sbjct: 254 PVSALIHAATMVTAGIYLVAR-NIELF-SLAPDVLHFIAIVGVITLILGATSALAQTDLK 311 Query: 313 RLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ-LYERIHTRDM 371 R++AY+++S +G++ +A+ GS AV ++ H A LF+ G +Y H +++ Sbjct: 312 RILAYSTISQLGYMFLALGVGSA---SAAVFHLMTHAFFKALLFLSAGALIYCMHHEKNI 368 Query: 372 RMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILF-GSFQVVPVITVISTFGLV 430 MGGL L A +P T F + +IL F P++ G Sbjct: 369 FKMGGLRKSQPLLALSFGIGCAALASLPMTSGFFSKELILERTLFAQQPILWWGGVVGAF 428 Query: 431 FASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPIL 486 F ++YS + +FGK +++ L++L ++ G PQ + Sbjct: 429 FTALYSAKLFFVIFFGKLSRP----STHNTPRAMAAVLIALMLLSLIGGIQPQGVF 480 >UniRef50_C4V3R7 NADH dehydrogenase (Quinone) n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V3R7_9FIRM Length = 634 Score = 298 bits (764), Expect = 3e-79, Method: Composition-based stats. Identities = 101/480 (21%), Positives = 196/480 (40%), Gaps = 17/480 (3%) Query: 5 WLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQ 64 + L P + + R + IA++ M L A S+ + L + Sbjct: 11 LIPLFPALAFLIIAPFTRREKNLSATIAIVMMALAFAFSVFVALAAVNYQITMGDPYVMK 70 Query: 65 SEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQG--FFHLNLMW 122 + + I +S+ + ID L+ LM+V+ L+ +L + S +E +G F + Sbjct: 71 TVWAH--IGAVELSMGVLIDPLTALMLVIVTLVSLLVYIYSVSYMEHDEGMGRFFAFISL 128 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 ++G+ ++++ + FWE + + Y LI + K S AA K FI T+ Sbjct: 129 FSAAMLGLVVSVNFLQLYVFWEGVGLCSYLLIGFYYDKVS----AREAAKKAFITTRIGD 184 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 ML+ IL + + +G ++ L F+ K PLH Sbjct: 185 FGMLVGILLVQVSFGTMDFIELRLMMPAYVLVAGTGYLTVIGLLLFMGPIGKSGQFPLHV 244 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGA 302 WL DA ++ A ++ + + R + LG + A Sbjct: 245 WLLDAMEGPTPTSALIHAATMVAAGVFLVARAFFIF--SECPLVMNFIAGLGAFTALFAA 302 Query: 303 WMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQL 362 +A Q K ++AY+++S +G++++A+ G A+ ++ ++ H A LF+ G + Sbjct: 303 VIAVTQRRFKAVLAYSTISQLGYMMLAVGIG---AFSASMFHLMTHAFFKAMLFLCAGAV 359 Query: 363 YERIH-TRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 +H D+ MGGLW KM L +A G+P F + IL + + Sbjct: 360 MHALHDETDITKMGGLWKKMPLTFVTMLIGVLAISGIPPFSGFFSKDEILAAAMHASTPL 419 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 +++TF + Y +L A+ G+++S+ E + + +++L +L ++ G + Sbjct: 420 YLMATFTSFLTAFYMARLLIVAFLGESRSE---HEAHEVDAFMRWPMIMLALLTIVSGLW 476 >UniRef50_A9EX64 NADH dehydrogenase (Ubiquinone) n=3 Tax=cellular organisms RepID=A9EX64_SORC5 Length = 854 Score = 298 bits (764), Expect = 4e-79, Method: Composition-based stats. Identities = 110/590 (18%), Positives = 202/590 (34%), Gaps = 94/590 (15%) Query: 2 LLPWLILIPFIGGFLCWQTE-RFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 LL ++ +P +G F+ R G R +AL +G ++ +L + + Sbjct: 15 LLAVILGLPALGAFVNGLFGKRLGKDAVRLMALAALGGAFLAAVTTFLMLPHEGGKLTWT 74 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQG--FFHL 118 I + ++DGLS M+++ +G L L S + + G F Sbjct: 75 AWRWFSITGRMGQSIPIDVAFSVDGLSGTMILVITGVGFLIHLYSSAYMREDPGYYRFFA 134 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 L + ++ + + ++ + F WE + + Y LI W + A K F+ Sbjct: 135 YLNLFIFSMLVLIMGDNLAVLFVGWEGVGMCSYLLIGFWFKDDKNAS----AGKKAFVVN 190 Query: 179 QASGLVMLIAILALVFVHYNATGVWT--------------------------FNYEELLN 212 + +L+A+ L + F + + Sbjct: 191 RIGDFGLLVAMAMLAYYTGTLNFDGIAANAGNLLAAVKIWPIGNMSADTVPGFLSFLIPS 250 Query: 213 TPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGL 271 P+ L L F+ A K +PL+ WLPDA + PT S A ++ Y + Sbjct: 251 QPVLVYAGTLAALALFLGCAGKSAQIPLYVWLPDAMA-GPTPVSALIHAATMVTAGVYLV 309 Query: 272 LRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIY 331 R S S + GV + A + Q D+K+++AY++VS +GF+ I + Sbjct: 310 ARLSAVFV--LSPFAMAVVAVTGVATALFAASIGLFQNDLKKVLAYSTVSQLGFMFIGVG 367 Query: 332 TGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIH--------TRDMRMMGGLWSKMKW 383 G A+ ++ H A LF+ G + +H ++DMR MGGL + M Sbjct: 368 VG---AFAAGFFHVLTHAFFKACLFLGAGSVIHAMHARIHDTDQSQDMRNMGGLKNHMPL 424 Query: 384 LPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV-------------------VPVITVI 424 L ++ G PG F + IL+ +F P I + Sbjct: 425 TRWTFLLACLSIAGFPGFAGFWSKDEILWRAFSSRIESVSTRGQPVWQWPEWLGPAIYWV 484 Query: 425 STFGLVFASVYSLAMLHRAYFGKAK--------------------------SQIASQELP 458 + Y + + G+ + ++ E Sbjct: 485 GILAATMTAFYMFRAYFQTFHGEFRGWTIVRGWKDPHPHGHHDDHHGHAHGEKLEGPEPH 544 Query: 459 GMSLRELFMILLLVVLLVLLG-FYPQPILDTSHSAIGNIQQWFVNSVTTT 507 L +++L L V G +P++ +H+ + V + Sbjct: 545 ESPLPMTIPLIVLGALSVFAGFLMAEPLVHLTHNHAFAPLAHLLEPVFSL 594 >UniRef50_Q9XAR5 NADH-quinone oxidoreductase subunit L n=38 Tax=Actinomycetales RepID=NUOL_STRCO Length = 654 Score = 298 bits (763), Expect = 4e-79, Method: Composition-based stats. Identities = 110/528 (20%), Positives = 199/528 (37%), Gaps = 44/528 (8%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 L+ L+ P +G + R +V WI + ++ L + L+ S + + Sbjct: 4 LIALLVAAPLLGAVVLLCGGRRLDRVGHWIGTLLAAVSFVLGVVLFADLLGSGAEDRTLT 63 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEK--YQGFFHLN 119 Q F + F + +D LS+ V+L +G L L S +E + F Sbjct: 64 --QHLFSWIPVEGFQADVAFRLDQLSMTFVLLITGVGSLIHLYSVAYMEHDERRRRFFGY 121 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 L L ++ + LA + L + WE + + Y LI W HK S TAA K F+ + Sbjct: 122 LNLFLAAMLILVLADNYLLLYVGWEGVGLASYLLIGFWQHKPS----AATAAKKAFLVNR 177 Query: 180 ASGLVMLIAILALVFVHYNATGVWTF--NYEELLNTPMSSGVEYLLMLGFFIAFAVKMPV 237 + + I I+ + + E L G + L +A K Sbjct: 178 VGDMGLSIGIMLMFLWFGTFAFGPVLGGHGEAGLAAGADEGKLTAIALMLLLAACGKSAQ 237 Query: 238 VPLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVI 296 VPL WL DA + PT S A ++ Y ++R N + + + +G + Sbjct: 238 VPLQSWLGDAM-EGPTPVSALIHAATMVTAGVYLIVRSGAIF--NGAPDAQLVVTIVGAV 294 Query: 297 GIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLF 356 + +GA + A+ DIK+ +A +++S +G++++A G + Y A++ ++ HG AGLF Sbjct: 295 TLLFGAIVGCAKDDIKKALAGSTMSQIGYMVLAAGLG-PIGYVFAIMHLVTHGFFKAGLF 353 Query: 357 ILCGQLYERIH-TRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSF 415 + G + ++ DMR GGL M +A +G PG F + I+ +F Sbjct: 354 LGAGSVMHGMNDEVDMRRYGGLRKYMPVTFVTFGLGYLAIIGFPGLSGFFSKDKIIEAAF 413 Query: 416 QV----VPVITVISTFGLVFASVYSLAMLHRAYFG---------------------KAKS 450 ++ + G + Y ++ +FG + + Sbjct: 414 AKGGTEGWILGACALLGAAITAYYMTRVMLMTFFGEERWRNAPTPSPAKPDVEPAAETRG 473 Query: 451 QIASQELPGMSLRELFMILLLVVLLVLLGFYPQP---ILDTSHSAIGN 495 +++L V V G + + G+ Sbjct: 474 TYEPPHPHESPGLMTIPMIVLAVGSVGAGAFFSIGDRFMHWLEPITGH 521 >UniRef50_C9N9J1 NADH dehydrogenase (Quinone) n=12 Tax=Streptomyces RepID=C9N9J1_9ACTO Length = 967 Score = 298 bits (763), Expect = 5e-79, Method: Composition-based stats. Identities = 106/485 (21%), Positives = 182/485 (37%), Gaps = 31/485 (6%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 + ++ + R G + +AL T Sbjct: 1 MTVLVLCHFVLAACAVPLVRRLGRRAFVVLALPPAATT----------VWAFTQWGTTAD 50 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF---FHL 118 WI + +++ L +D L+ LMV+L +G+L +L F Sbjct: 51 GGTVTSSWDWIATYDVTVALRLDALAELMVLLAAGVGMLVLLYCASYFTDGSPQLAPFAG 110 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 NL+ G ++ + LA D+ + FWE+ V Y LI S+ K +A + T Sbjct: 111 NLLAFAGAMLALVLADDLITLYVFWELTTVFSYLLIG----HTSERKKNRRSALQALTVT 166 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 GL ML+ L L + + P ++ + ++ K + Sbjct: 167 TLGGLAMLVGFLILGEAAGTYRIS-----AIVADPPEATLAVSVAVVLVLCGALSKSAIW 221 Query: 239 PLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 P WLP+A + APT S A ++K Y + R + + P+ + LG Sbjct: 222 PFSLWLPNAMA-APTPVSAYLHAAAMVKAGVYLVARLAPAF--ADVPVWRPVVLVLGGAT 278 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 + G W A D+K ++AY +VS +GF+ + G++ A AV ++AH L A LF+ Sbjct: 279 MLLGGWRALRLHDLKLVLAYGTVSQLGFLTVLAGAGNRNAALAAVAMILAHALFKAALFL 338 Query: 358 LCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ- 416 + G + TRD+R + GL M +L A+ + A + +P F + L Sbjct: 339 VTGIVDHATGTRDLRALSGLGRTMPYLCAVGVLAAASMAAVPPLLGFAAKEAALEALLHG 398 Query: 417 --VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVL 474 + G V Y+L + A+ K +A + L +L V Sbjct: 399 DTADRWELAVVVLGSVLTVAYTLRFVWGAF--ARKRGVADTPAHRVGAALLAPPAVLAVA 456 Query: 475 LVLLG 479 ++LG Sbjct: 457 GLVLG 461 >UniRef50_B1ZSE3 NADH dehydrogenase (Quinone) n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZSE3_OPITP Length = 683 Score = 298 bits (763), Expect = 5e-79, Method: Composition-based stats. Identities = 114/515 (22%), Positives = 199/515 (38%), Gaps = 41/515 (7%) Query: 12 IGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPW 71 G + ++ AL+ G +L + L G P + EF P Sbjct: 18 AAGVVLALLCVRRERLA---ALVGFGAPALAALAGLVAALRLLLGGVGAPLPRFEFIPPL 74 Query: 72 IPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEK-----YQGFFHLNLMWILGG 126 P ++ + +D L +V++ L G+ + S + G +L Sbjct: 75 FPFL--TLTVRVDALGAFFLVVSSLAGLAISIYSIGAAKGLAGRGNVGVLAALFNALLLA 132 Query: 127 VIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVML 186 VF+A D++LF WE+M + Y L++ + A +FI + ++ Sbjct: 133 TALVFMAGDLWLFLGAWELMALTAYGLVSFAHEQPETR----RAGVLYFIMSHLDAACVV 188 Query: 187 IAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPD 246 + +L L A+G +F+ + M+ G + F + F +K +VPLH WLP Sbjct: 189 LGLLLLF----QASGSTSFDSLHAIGGHMAPGKRDAAFVLFLLGFGIKAGIVPLHIWLPA 244 Query: 247 AHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAF 306 AH AP+ S ++G+L+K+ YGL+R S + + +G + G A Sbjct: 245 AHPVAPSNVSAFMSGVLIKSGIYGLIRVSFDFLGTPPGWWGMTVLVIGTVSAVLGVLYAL 304 Query: 307 AQTDIKRLIAYTSVSHMGFVLIAIYT-----------GSQLAYQGAVIQMIAHGLSAAGL 355 + D+KRL+AY S+ ++G +L+ + T + LA + I H L Sbjct: 305 MEHDLKRLLAYHSIENIGIILMGVGTSLLFLHSGHTALATLALIAGLYHTINHATFKGLL 364 Query: 356 FILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSF 415 F+ G + HT +M MGGL +M L AVA +P FV E++ Sbjct: 365 FLGAGAVLHATHTHNMEEMGGLAKRMPQTAFCFLIGAVAISALPPLNGFVSEWLTYQSLL 424 Query: 416 QVV-----------PVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRE 464 Q P+ + A+ + + + +S+ A+ Sbjct: 425 QGFDASQSLERLVLPLSGAMLALTGALAAACFVKAYGVTFLAQPRSEAAA-HAQEAGPML 483 Query: 465 LFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQW 499 F + +LVV VLLG +P ++ + Sbjct: 484 RFGMAVLVVACVLLGLFPTTVIRLLDPVTQLLTGQ 518 >UniRef50_B1ZRS1 Proton-translocating NADH-quinone oxidoreductase, chain M n=3 Tax=Verrucomicrobia RepID=B1ZRS1_OPITP Length = 509 Score = 297 bits (762), Expect = 6e-79, Method: Composition-based stats. Identities = 136/492 (27%), Positives = 239/492 (48%), Gaps = 13/492 (2%) Query: 4 PWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQW 63 P L+ I + +A + G+ L+L +W ++ Sbjct: 8 PLLVSIASPLALALAIAAGLPKRWSVRLAYVAFGIPALLALHVWWHFSAVPQENGYAFLT 67 Query: 64 QSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWI 123 + +GI + L ++G+SL + VL L+G+ A L + + + + + L+ + Sbjct: 68 NYPTG---LSAYGIGLKLGLNGISLPLFVLAALVGLAAGLYAIQSQAERLKIYLMLLLIM 124 Query: 124 LGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGL 183 GG++GVF ++D+F F+FF E+ L+P + ++ +WG G+ R AA K IY + Sbjct: 125 QGGLLGVFASVDVFFFYFFHELALIPTFIMVGVWG-----GRDRSYAAMKLTIYLTVGAM 179 Query: 184 VMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGW 243 + L+ ++AL + + + P+ ++ + F + + + P H W Sbjct: 180 LSLLGLIALYVKSGANSFDLITLRQYVAGQPLGETLQQNIFAVLMFGFGILVSLWPFHTW 239 Query: 244 LPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG-IFYGA 302 P + AP++ ++ AG+L K YGL++ +LPL P A ++ WL VIG + Sbjct: 240 APLGYGAAPSSAAMLHAGVLKKFGLYGLIQVALPLLPAGLAHWSHPLAWLAVIGNVLVVG 299 Query: 303 WMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQL 362 + AQ D+K++I Y+SV HMG+ + I GS L G V+ M+AHGLS A LF+L + Sbjct: 300 LITMAQRDLKQMIGYSSVMHMGYAFLGIAAGSTLGVGGVVMIMVAHGLSVALLFLLATSI 359 Query: 363 YERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVIT 422 + R HT M MGGL K L A A++G+PG NF GEF I ++ P+IT Sbjct: 360 HHRTHTFAMDEMGGLAQKTPVLAAFFTAATFASIGLPGFANFWGEFTIFIALWRFSPLIT 419 Query: 423 VISTFGLVFASVYSLAMLHRAYFGKAKSQIAS----QELPGMSLRELFMILLLVVLLVLL 478 ++ G++ +++Y L + +FG + +A+ + E L+L+ L+ + Sbjct: 420 ALAVSGIIISAIYGLRSVANVFFGAPTAALATVTAQHPPADLRWSEKVPALILLAALLFV 479 Query: 479 GFYPQPILDTSH 490 GF+P+ I + Sbjct: 480 GFWPKSISTPIN 491 >UniRef50_A0EYN0 NADH-ubiquinone oxidoreductase chain 4 n=2 Tax=Xenoturbella bocki RepID=A0EYN0_XENBC Length = 456 Score = 297 bits (762), Expect = 6e-79, Method: Composition-based stats. Identities = 118/409 (28%), Positives = 198/409 (48%), Gaps = 13/409 (3%) Query: 81 LAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKY----QGFFHLNLMWILGGVIGVFLAIDM 136 +++D +S +++L+ L L +L S ++ + F + +I F + Sbjct: 54 MSLDFISSPLMILSAWLAPLMMLASKAHMKDKTKVQKKIFLTITSLLQMTLIMTFTVNEW 113 Query: 137 FLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVH 196 LFF +E L+P LI +G + K R+ A++ F IYT L +L +++ L Sbjct: 114 VLFFIMFETTLIPTLTLITKFGAQ----KERLIASSYFMIYTLCGSLPLLTSLMIL---- 165 Query: 197 YNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGS 256 TG L ++ ++ + + F +KMP+ +H WLP AH +AP AGS Sbjct: 166 NTKTGTSNMMVLTLQTDGVNMYMKNMWWMISLTGFFIKMPLFSVHLWLPKAHVEAPVAGS 225 Query: 257 VDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIA 316 + LA +LLK YGLLR + P ++ I M L + G + + QTD+K LIA Sbjct: 226 MILAAVLLKMGGYGLLRMAPIFNPFSTLLTNKIIMALALWGTLMTSMICLRQTDLKSLIA 285 Query: 317 YTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGG 376 Y+SV+HM AI + ++QGA MIAHGL+++ LF L +YER HTR+M + G Sbjct: 286 YSSVAHMSMTTAAILIMTSWSWQGAYNMMIAHGLTSSLLFALANTIYERSHTRNMTITRG 345 Query: 377 LWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYS 436 M + + ++ + +P T NF+GE M++F + +++ V ++YS Sbjct: 346 YKILMPSMYMWWMLAMLSNMSLPPTMNFLGEIMMIFSLMNWSVLTVLVTAVATVMTALYS 405 Query: 437 LAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPI 485 L + GK + + M E+ L+ ++ L L+ P+ I Sbjct: 406 LYTVIMTQHGKPMNNNKN-PTNSMKSTEMMNSLMHILPLTLMITMPEII 453 >UniRef50_C0W918 Na(+)/H(+) antiporter subunit n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W918_9ACTO Length = 966 Score = 297 bits (762), Expect = 6e-79, Method: Composition-based stats. Identities = 113/522 (21%), Positives = 197/522 (37%), Gaps = 39/522 (7%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 MLL + L +GG + R G + AL+ WL S G+ Sbjct: 1 MLLALVALHMLVGGVVPLLARRIGTRAFFAAALVPAM------SFAWLLTQAGTVTSGGV 54 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQG--FFHL 118 Q + WIP G+S+ L + + ++ ++ +G L +L Sbjct: 55 LGSQ----VAWIPTIGVSLTLRMGLVQWILALIVTGVGALVLLYCRWYFSPGPAATRCLT 110 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 L W G ++G+ A D+ + + WE+ V Y LI K AA I T Sbjct: 111 LLTWFAGTMLGLVSADDLIVLYVMWELTTVYSYLLIG----NDFTRKANRGAALTALIVT 166 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 GL ML+ I+ L + T + ++ P + + + L + K +V Sbjct: 167 TIGGLAMLVGIVILWVL------TSTLSLSAIVAAPPTGALATVAALLMLVGALSKSALV 220 Query: 239 PLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 P H WLP A + A + A ++K Y + + ++ + LG + + Sbjct: 221 PFHFWLPGAMAAATPVSAYLHAAAMVKAGVYLVAVLAPAF--SSVPGWRLAVGLLGAVTM 278 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFIL 358 G W + QTDIK L+AY +VS +GF+++ G++ A + IAH L + LF++ Sbjct: 279 LIGGWRSLRQTDIKLLLAYGTVSQLGFMVLLTGMGTRSAALAGLAMTIAHALFKSALFLI 338 Query: 359 CGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSF--- 415 G + + TRD+R + G+ +M+ L + + A + G+P FVG+ Sbjct: 339 IGIIDKSAGTRDLRELSGVGRRMRSLSLVMVLAAASMAGLPPMLGFVGKEAAFAALVALV 398 Query: 416 ----------QVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLREL 465 V ++ + G V YSL ++ A K + +P L Sbjct: 399 SQGDGTGLSPAVAVLVLIAVVLGSVLTMAYSLRLVWGALALKPGKAETTLTMP--PRAML 456 Query: 466 FMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNSVTTT 507 LL + + G + ++ + Sbjct: 457 IAPALLTLGSLAGGLLASRLGHVLEPYAESMPLGSATTHLAL 498 >UniRef50_B5EN60 Proton-translocating NADH-quinone oxidoreductase, chain L n=25 Tax=Proteobacteria RepID=B5EN60_ACIF5 Length = 660 Score = 296 bits (760), Expect = 9e-79, Method: Composition-based stats. Identities = 102/488 (20%), Positives = 185/488 (37%), Gaps = 32/488 (6%) Query: 8 LIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEF 67 + P +G + W +I + + LSL + Q G+ +T + W Sbjct: 21 VAPLVGALVAGFWGWRLRDHAHWAPIIGVAIAFYLSLAVLWQTGHGITFYGDVYTWAVLG 80 Query: 68 DMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQG--FFHLNLMWILG 125 +P +S+ ID L+ LM+V+ + + L + + G F + Sbjct: 81 HLP------VSVGFDIDSLTALMLVVVTFVSLSVHLYTVGYMHGDPGYARFFSYIALFTF 134 Query: 126 GVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVM 185 +I + ++ + FF WE + + Y LI W + S AA K FI + Sbjct: 135 SMIMLVMSNNFLQLFFGWEAVGLVSYLLIGFWFQRESANV----AAIKAFIVNRVGDFGF 190 Query: 186 LIAILALVFVHYNATGVWTFNYEELLN-------TPMSSGVEYLLMLGFFIAFAVKMPVV 238 LI I A+ + F L V + L F+ K V Sbjct: 191 LIGIAAVYHYCGSLDYRTVFAAVPHLIGQTLEIIPGHPWSVLTWIALLLFVGAMGKSAQV 250 Query: 239 PLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 PLH WLP++ + PT S A ++ + + R S SA + + +G + Sbjct: 251 PLHVWLPESM-EGPTPISALIHAATMVTAGIFMVARMSPIF--EQSATALSVVLIIGAVT 307 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 F+ + Q DIKR+IAY+++S +G++ A+ A+ A+ ++ H A LF+ Sbjct: 308 AFFMGLVGLVQNDIKRIIAYSTISQLGYMTAALGAS---AFSAAIFHLMTHAFFKALLFL 364 Query: 358 LCGQLYER-IHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMIL----F 412 G + + +D+R MGGL M L +++ G+P F + +I+ Sbjct: 365 AAGSVIHAMSNEQDIRKMGGLRKVMPITYITFLIGSLSLSGIPPFAGFFSKDLIIEAVGL 424 Query: 413 GSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQ-ELPGMSLRELFMILLL 471 + + G ++Y+ M + G + ++ L ++ L Sbjct: 425 STLPGAGWAEWMLVAGAFVTALYTFRMFFLVFHGAPRMDAHTRAHLHESPWVITVPLIAL 484 Query: 472 VVLLVLLG 479 + V G Sbjct: 485 AIPAVYAG 492 >UniRef50_A1WYN7 NADH dehydrogenase (Quinone) n=5 Tax=Gammaproteobacteria RepID=A1WYN7_HALHL Length = 772 Score = 296 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 109/512 (21%), Positives = 206/512 (40%), Gaps = 28/512 (5%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L ++ + + W G + A + LTL + L + Sbjct: 1 MLAAVLSGFLLAVLVPWLQPVLGRRAGWAFAALPAVLTLYFATFL----------PQIVG 50 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIE--KYQGFFHLN 119 + W+P +++ +DGLSLL +L +G +L + ++ Q F+++ Sbjct: 51 GETVWMEYTWVPGLDVNLSFYVDGLSLLFALLISGIGTFVLLYASDYLDGDDRQPRFYVH 110 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 ++ + ++G+ L+ ++ F FWE+ + Y LI G+ D K R A + + T Sbjct: 111 ILAFMASMLGLVLSDNLITLFIFWELTSITSYMLI---GYDNEDAKARRYA-LQGLLVTV 166 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 GL +L + L V T +++ L L + K VP Sbjct: 167 GGGLALLAGFIMLGIVGDTYTISELLEQGDVIRE---HEWYVPLTLLILLGAFTKSAQVP 223 Query: 240 LHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 H WLP A + APT S + ++K + L + L +A + + +G I + Sbjct: 224 FHFWLPRAMA-APTPVSAYLHSATMVKAGVFLLAKLHPAL--GDTALWMTLLPLVGAITM 280 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFIL 358 F GA+ A T IK ++A ++V +G + + G++ A ++AH L LF++ Sbjct: 281 FTGAYFAVRSTGIKGVLANSTVMALGTLTMLAGIGTEGAMIAFGAFLLAHSLYKGALFLV 340 Query: 359 CGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVV 418 G L T+++ MGGL M L+ A++ G+P F+G+ ++L + Sbjct: 341 AGALDHETGTKEILQMGGLRHAMPKTAVLAAVSALSLAGIPPLFGFLGKELMLESVLEAP 400 Query: 419 PVITVISTFGLVFASVYSL---AMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLL 475 + V++ L A + + + R +FG+ +E L +L L Sbjct: 401 YLSAVLALLALGTAVLVVIVAGIVAIRPFFGERTE--TPKEPHEAPPGMLAGPAVLGTLS 458 Query: 476 VLLGFYPQPILDTSHSAIGNIQQWFVNSVTTT 507 VL G +P + ++ V+ + Sbjct: 459 VLFGLFPFLPEGLIGAVASSLAGEPVSVSLSL 490 >UniRef50_B6YTX9 Hydrogenase 4, component F or formate hydrogen lyase, subunit 3 n=3 Tax=Thermococcus RepID=B6YTX9_THEON Length = 522 Score = 296 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 121/515 (23%), Positives = 215/515 (41%), Gaps = 38/515 (7%) Query: 2 LLPWLILIPFIGGFLCWQTE---RFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSA 58 ++ +IP + F T R K+ + ALI GLTL S +L+ Q S Sbjct: 3 IVGLTPVIPILFAFALPLTSIIVRGNRKIIQAYALIGTGLTLLASYELFRQVYNSSKPLI 62 Query: 59 GIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF--F 116 W GI +D +S L ++T L L + S++ +E +G + Sbjct: 63 YTFG-------GWTAPVGIIYE--VDRMSALFALVTAALMFLIAIYSYRYLEHEEGLEWY 113 Query: 117 HLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFI 176 + + + G++GV L D F F E+ + Y L+ + D I A K+ Sbjct: 114 YTLYLGLEAGLLGVLLTGDAFNLFVMIEVTSIAAYALVMFY----RDRGDSICAGLKYAF 169 Query: 177 YTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGV-------EYLLMLGFFI 229 + +A+ L L+ P++ + + Sbjct: 170 IGALGTTMYFLALGTLYGAFGTLNMANLSALIHGLSFPIAGTTYGNIAIASGVALALATW 229 Query: 230 AFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNAS------ 283 AF +K +VP H WLP+AH AP+ S L+G+++ Y L+RF ++ Sbjct: 230 AFLIKAAIVPNHFWLPEAHPAAPSPISAILSGLVVNVGVYSLIRFLYTVYGGEVSGSLGG 289 Query: 284 --AEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGA 341 + I + LG + +GA M AQ D+K+LIAY+++ HMG++ +A+ G+QLA Q A Sbjct: 290 VIHALSVILIVLGAVSALFGALMMNAQRDVKKLIAYSTIMHMGYLAMAVGVGTQLALQAA 349 Query: 342 VIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGT 401 +I H ++ A LF+ G + +RD+ + GL +M ++ +G+P Sbjct: 350 AFHIINHAIAKALLFLAAGAFIHAVGSRDISDLAGLGRQMPVATFGLAIATLSLVGIPPF 409 Query: 402 GNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMS 461 F + ++ + P + ++ V A V + + + GK + +E Sbjct: 410 NVFFSKLLLFNAFMEESPALALVLVLSSVIALVAYVRVFQEIWLGKPRENTTIRE----H 465 Query: 462 LRELFMILLLVVLLVLLGFY-PQPILDTSHSAIGN 495 ++L+L V+ +LLG + P I + A+ Sbjct: 466 GSMSGVLLILAVICLLLGLFAPYIIEHYINPAVSQ 500 >UniRef50_A5G8U2 NADH dehydrogenase (Quinone) n=13 Tax=Desulfuromonadales RepID=A5G8U2_GEOUR Length = 669 Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats. Identities = 98/456 (21%), Positives = 180/456 (39%), Gaps = 39/456 (8%) Query: 80 HLAIDGLSLLMVVLTGLLGVLAVLCSWKE-----IEKYQGFFHLNLMWILGGVIGVFLAI 134 + +D LS + +++ L+ + + + ++ + ++ + +A Sbjct: 82 EIGLDHLSAVFLLIIFLISICCSIYATGYWPAASNQRTSRKLTFFFGLLTAALVLLVIAR 141 Query: 135 DMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVF 194 D LF WE+M + YF++ HK + A + + T L + L Sbjct: 142 DSILFLMAWEVMALSAYFVLTTEDHKPEVRE----AGIIYMVATHTGTLALFAMFSLLKG 197 Query: 195 VHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTA 254 + + + + + + F +K ++PLH WLP AH+ AP+ Sbjct: 198 AAASHQ------FSAMTAINPAPPLAAAIFCTALFGFGLKAGLMPLHIWLPSAHATAPSH 251 Query: 255 GSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRL 314 S ++G+++KT YG++R L FP + + G++ G A Q D+KRL Sbjct: 252 ISAIMSGVMIKTGIYGIIRV-LSFFPQPPIWWGITLLVAGIVSAVLGVAFALGQHDLKRL 310 Query: 315 IAYTSVSHMGFVLIAIY-----------TGSQLAYQGAVIQMIAHGLSAAGLFILCGQLY 363 +AY S+ ++G + + I + L GA++ + H L + LF+ G + Sbjct: 311 LAYHSIENIGIIFMGIGVAVIGQATGQPLLTVLGMAGALLHTLNHALFKSLLFLGAGAVI 370 Query: 364 ERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSF-------- 415 HTR++ MGGL M W L L AVA G+P FV E++I G F Sbjct: 371 HATHTREIDRMGGLAKAMPWTAILFLLGAVAICGLPPLNGFVSEYLIYLGFFGGVNTVSG 430 Query: 416 ---QVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLV 472 + + A + + + G +S+ + L ++LL Sbjct: 431 PAVPAMALAAPSLALVGALAVACFVKVFGIVFLGARRSREI-EPLQDAGWPMRAPMILLG 489 Query: 473 VLLVLLGFYPQPILDTSHSAIGNIQQWFVNSVTTTR 508 L V++G +PQ + I + V + T Sbjct: 490 ALCVIIGLFPQLVARLLQPTIYSWAPTLVITGQTIP 525 >UniRef50_Q1RKE6 NADH-quinone oxidoreductase subunit L n=15 Tax=Rickettsia RepID=NUOL_RICBR Length = 642 Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats. Identities = 103/496 (20%), Positives = 192/496 (38%), Gaps = 30/496 (6%) Query: 6 LILIPFIGGFL-CWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQ 64 +IL+P + R K+ +A + L+ +L ++ G + Sbjct: 9 IILLPLASALINGLFVRRIDKKLASIVATSFLSLSALFALIIFYHTGLN-------GHII 61 Query: 65 SEFDMPWI--PRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQG--FFHLNL 120 +PWI +F + + ID L+ +M + + + + S + + +G F L Sbjct: 62 HIKLLPWIEVSQFKVDWSIYIDQLTSIMFIAVTWVSSVVHIYSLGYMSRDKGIVRFLSFL 121 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 ++ + A + FF WE + + Y LI W K S K AA K FI + Sbjct: 122 SLFTFFMLMLVSADNFLQLFFGWEGVGICSYLLIGFWYSKESANK----AAIKAFIANRV 177 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEE------LLNTPMSSGVEYLLMLGFFIAFAVK 234 ++ ++ ++F ++A F +L + + L FI K Sbjct: 178 GDFAFILGVITIIFYCHSANYEDVFLLAPKLANTKILLADFEISILDIACLLLFIGCMGK 237 Query: 235 MPVVPLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWL 293 + LH WLPDA + PT S A ++ + + R S S + Sbjct: 238 SAQIGLHVWLPDAM-EGPTPVSALIHAATMVTAGVFLVARCSYLF--EYSPMVLQFITII 294 Query: 294 GVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAA 353 G I + A +A Q DIK++IAY++ S +G++ +A AY + ++ H A Sbjct: 295 GGITCLFAASIAIMQNDIKKIIAYSTCSQLGYMFMACGVS---AYNSGIFHLVTHAFFKA 351 Query: 354 GLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFG 413 LF+ G + +H +D+ MG L +KM L ++A +G+ F + IL Sbjct: 352 LLFLSAGSVIHAVHEQDIFKMGELRNKMPITYGNFLIGSLALIGIYPLAGFYSKDSILEA 411 Query: 414 SFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAK-SQIASQELPGMSLRELFMILLLV 472 ++ + + + ++YS+ ++ + GK + + + + LLV Sbjct: 412 AYSSGSFMFIFGILAAILTAIYSMKIIMLVFHGKTRLEKDVFEHAHEPPKVMNNPLTLLV 471 Query: 473 VLLVLLGFYPQPILDT 488 G +L Sbjct: 472 AGSFFSGMIGYYLLSM 487 >UniRef50_P31971 NAD(P)H-quinone oxidoreductase chain 5 n=25 Tax=cellular organisms RepID=NU5C_SYNP2 Length = 664 Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats. Identities = 105/524 (20%), Positives = 197/524 (37%), Gaps = 44/524 (8%) Query: 4 PWLILIPFIGGFLCWQ-TERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 + ++P +G + + L + + + + L G +Q G Sbjct: 9 WLIPVLPLLGAMVIGIGLISLNKFTNKLRQLNAVFVLSLIGTSMALSFGLLWSQIQGHEA 68 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQG--FFHLNL 120 + + F + + +D LS LM V+ + +L ++ + + G F+ L Sbjct: 69 FTYTLEWAAAGDFHLQMGYTVDHLSALMSVIVTTVALLVMIYTDGYMAHDPGYVRFYAYL 128 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 ++G+ + ++ + FWE++ + Y LI W D K A K F+ + Sbjct: 129 SIFSSSMLGLVFSPNLVQVYIFWELVGMCSYLLIGFWY----DRKAAADACQKAFVTNRV 184 Query: 181 SGLVMLIAILALVFVHYNATGVWTFN--YEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 +L+ +L L + + + + + +SS + + + F+ K Sbjct: 185 GDFGLLLGMLGLYWATGSFEFDLMGDRLMDLVSTGQISSLLAIVFAVLVFLGPVAKSAQF 244 Query: 239 PLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 PLH WLPDA + PT S A ++ + + R P E + W G Sbjct: 245 PLHVWLPDAM-EGPTPISALIHAATMVAAGVFLVARMYPVFEP--IPEAMNVIAWTGATT 301 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 F GA +A Q DIK+ +AY+++S +G++++A+ G Y + ++ H A LF+ Sbjct: 302 AFLGATIALTQNDIKKGLAYSTMSQLGYMVMAMGIG---GYTAGLFHLMTHAYFKAMLFL 358 Query: 358 LCGQLYERIHT---------RDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEF 408 G + + +DMR+MGGL M L +A G+P F + Sbjct: 359 GSGSVIHGMEEVVGHNAVLAQDMRLMGGLRKYMPITATTFLIGTLAICGIPPFAGFWSKD 418 Query: 409 MILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGK-------------------AK 449 IL +F+ PV+ I + Y M + G+ + Sbjct: 419 EILGLAFEANPVLWFIGWATAGMTAFYMFRMYFLTFEGEFRGTDQQLQEKLLTAAGQAPE 478 Query: 450 SQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAI 493 + L F ++ L V VL+G P + + + Sbjct: 479 EGHHGSKPHESPLTMTFPLMALAVPSVLIGLLGVPWGNRFEAFV 522 >UniRef50_Q9G8P5 NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Naegleria gruberi RepID=Q9G8P5_NAEGR Length = 474 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 150/460 (32%), Positives = 241/460 (52%), Gaps = 16/460 (3%) Query: 40 LALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGV 99 + L + +++ S + +I F S IDG+S+ + L+ L Sbjct: 17 FYFDISLIIFFIFNIVWVLFDSFEPSFQFIQYINLFEYSFLFGIDGISIFFIYLSTFLIP 76 Query: 100 LAVLCSWKEIEKY----QGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIA 155 L +L S+ +++ + L L +I VF A+D+ +F+ +E++L+P + LI Sbjct: 77 LCLLFSFYNMKQKGVSEVKMYQSFLFLTLFLLIFVFSALDILVFYIMFEIILIPFFVLIG 136 Query: 156 LWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPM 215 + + K RI A+ FF YT +MLI+I +L + T N E LLN Sbjct: 137 VSSY----RKRRIHASYLFFFYTLVGSFLMLISIFSLY------SFTGTSNIEVLLNNQY 186 Query: 216 SSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFS 275 S E ++ L FFI+FA+K+P+ P H WLP+AH +APT GSV LAG+LLK +YG LRF Sbjct: 187 SFYRENIVWLTFFISFAIKIPMFPAHIWLPEAHVEAPTEGSVLLAGVLLKLGSYGFLRFL 246 Query: 276 LPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQ 335 +PLFPN++ ++P+ + + +GIFY +++ Q DIKR+IAY+SVSHM ++ ++T Sbjct: 247 MPLFPNSTYYYSPLVILIACLGIFYTSFVTLKQIDIKRIIAYSSVSHMNVCILGLFTFHS 306 Query: 336 LAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVAT 395 L G++ MIAHGL + GLF L G LY R HT+ ++ GL M F ++ Sbjct: 307 LGIAGSIHLMIAHGLVSGGLFFLVGMLYNRHHTKLLKYYSGLVYTMPLFSFFFFIFIISN 366 Query: 396 LGMPGTGNFVGEFMILFGSF-QVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIAS 454 + P T NF+GEF+I+ G F + G+ +VYSL + ++ F Sbjct: 367 ISFPLTSNFIGEFLIIVGLFLSFNYYALFFTLVGVFICTVYSLWLYNKLVF-MIPKYQYI 425 Query: 455 QELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIG 494 + +S E ++ +++ ++ LG YP I ++I Sbjct: 426 KYYNDLSFLECSLLFIILFFVLWLGIYPYSIFSILDTSIN 465 >UniRef50_Q1AVJ0 Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVJ0_RUBXD Length = 656 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 94/483 (19%), Positives = 193/483 (39%), Gaps = 22/483 (4%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 +++ + +IP + F+ R + +++A+ M ++ S Sbjct: 8 LVIAAIPVIPLVVFFVLALFGRLLRENAQYVAIFGMVFSVVFSFFALYLVIRDGRPLEFS 67 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI--EKYQGFFHL 118 W + G I + ID L+ +M+V+ + ++ L S + ++ +++ Sbjct: 68 VYW-----INLGEGGGFPIGVYIDELAAVMLVVVSFVSLMIQLYSGGFMAGDRRFAWYYA 122 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 L ++G+ +A + + WE++ + Y LI W K + AA K FI T Sbjct: 123 VLNLFTASMLGLVVAPNFIELYICWELVGLCSYLLIGHWFEKPAARD----AALKAFIVT 178 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 + + + I+ E + + ++ F+ K Sbjct: 179 RIGDAALFVGIIMFWRATGTTAFEGI--AEAAQAGFIGGSLLTAAVVLVFVGAIGKSAQF 236 Query: 239 PLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 PLH WLPDA + PT S A ++ Y + R + +A I ++G Sbjct: 237 PLHVWLPDAM-EGPTPVSALIHAATMVAAGVYLVARTYDIFVQSPTAML--IVAYIGAFT 293 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 F A MA + DIKR+IAY++VS +G++++ + G A+ + + H A LF+ Sbjct: 294 AFMAATMALVKKDIKRVIAYSTVSQLGYMMLGLGVG---AFSAGMFHLYNHAFFKALLFL 350 Query: 358 LCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV 417 G + + + ++ MGGL +M + ++ G+ F + I+ +F+ Sbjct: 351 CAGSIIHAMDSYNLFEMGGLRRRMPLTFWTMVIAGLSLAGIFPLAGFWSKDAIIASAFEE 410 Query: 418 VPVITVISTFG-LVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLV 476 + G + + Y + A+ G+ +++ A++ + +++L VL V Sbjct: 411 HYYVLYALAIGTVFLTAFYIFRAIFLAFTGEPRTEGAARAV-ESPGVMTVPMVILAVLSV 469 Query: 477 LLG 479 G Sbjct: 470 ASG 472 >UniRef50_C5C6P2 NADH:ubiquinone oxidoreductase subunit 5 (Chain L)/multisubunit Na+/H+ antiporter, MnhA subunit n=3 Tax=Micrococcaceae RepID=C5C6P2_MICLC Length = 1032 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 100/460 (21%), Positives = 182/460 (39%), Gaps = 24/460 (5%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L L + + G + +A + L QL AG P Sbjct: 1 MLVILTALFVVALAAPVIFRWTGRQGFYLLAAAPAAGFVWLLTQLPHVFALQEALDAGRP 60 Query: 62 QWQ----SEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF-- 115 + +PW+P I + +D L+ M ++ +G L + + +++ Sbjct: 61 VPASAAHLDRTVPWVPYLEIELAFRMDVLAAFMSLIVLGVGALVLAYCARYFREHEPRNA 120 Query: 116 -FHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKF 174 F L+ G + G+ D+ + + FWE+ V + LI GH+ ++ ITA Sbjct: 121 VFGGQLLAFAGAMFGLVTTDDLMVLYTFWEITSVLSFLLIGYSGHRIFARRSAITA---- 176 Query: 175 FIYTQASGLVMLIAILALVFVHYNATGVWTFNY-EELLNTPMSSGVEYLLMLGFFIAFAV 233 I T GL ML ++ L + LL + + + I Sbjct: 177 LIVTTFGGLAMLAGLIMLAHFAGSWRISGVLAAAPGLLADDGGRVLLEVAVGLVLIGALT 236 Query: 234 KMPVVPLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMW 292 K P H WLP A + APT S A ++K + + R + + A + + + Sbjct: 237 KSAQAPFHFWLPAAMA-APTPVSAYLHAAAMVKAGVFLVARLAPEF--HGLAMWQVLVIG 293 Query: 293 LGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSA 352 +G+ + G W A QTD+K ++AY +VS +GF+++A G++ A + ++AH + Sbjct: 294 VGLWTLLLGGWRALRQTDVKLVLAYGTVSQLGFLMVANGLGTRDAAMAGLAMLLAHAVFK 353 Query: 353 AGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILF 412 A LF++ G + TRD+R + G+ + L A+++ ++ G+P FV + +L Sbjct: 354 APLFMIVGIIDHEAGTRDLRKLSGIGRRHPVLAAVAVAAGLSMAGLPPLFGFVAKESVLE 413 Query: 413 GSFQ--------VVPVITVISTFGLVFASVYSLAMLHRAY 444 V+ G V Y+ L + Sbjct: 414 SLAAHGAAHGGVWAWSPLVVMALGSVLTFAYTWRFLWGCF 453 >UniRef50_Q3AH00 Proton-translocating NADH-quinone oxidoreductase, chain L n=6 Tax=Chroococcales RepID=Q3AH00_SYNSC Length = 669 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 109/519 (21%), Positives = 195/519 (37%), Gaps = 46/519 (8%) Query: 3 LPWLI-LIPFIGGFLCWQ-TERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 L WLI ++P G L F + R + + L + L Q G Sbjct: 7 LAWLIPVLPLFGAVLTGLGLISFNRTINRLRKPVALLLISCVGAAAALSYSILFNQLNGA 66 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQG--FFHL 118 P + F F + + +D L +M+ L + +L ++ S + +G F Sbjct: 67 PPVEHLFVWASAGSFILPMGYVVDPLGAVMLALVTTIALLVLVYSHGYMAHDKGYVRFFT 126 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 L ++G+ ++ ++ + FWE++ + Y L+ W D AA K F+ Sbjct: 127 YLALFSSSMLGLIISPNLLEIYVFWELVGMCSYLLVGFWY----DRDGAAHAAQKAFVVN 182 Query: 179 QASGLVMLIAILALVFVHYNA--TGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMP 236 + +L+ IL L + + G+ L ++ LL L F+ K Sbjct: 183 RVGDFGLLLGILGLFWATGSFDFQGIADGLQNGLAAGTVAPWAALLLCLLVFMGPMAKSA 242 Query: 237 VVPLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGV 295 PLH WLPDA + PT S A ++ + + R + +G Sbjct: 243 QFPLHVWLPDAM-EGPTPISALIHAATMVAAGVFLVARLDP--LYAQFPVVQTVIAVVGT 299 Query: 296 IGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGL 355 I F GA +A Q D+K+ +AY++VS +G++++A+ G+ +A + ++ H A L Sbjct: 300 ITCFLGASIALTQMDLKKGLAYSTVSQLGYMMLAMGCGAPVA---GIFHLVTHAFFKAML 356 Query: 356 FILCGQLYERIHT---------RDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVG 406 F+ G + + +DMR+MGGL KM +A G+P F Sbjct: 357 FLGSGSVIHAMEEVVGHEPVLAQDMRLMGGLRKKMPVTSITFFIGCIAISGIPPLAGFWS 416 Query: 407 EFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAK----------------- 449 + IL +F P++ V+ + Y + + G+ + Sbjct: 417 KDEILGQAFNSYPLLWVVGFLTAGMTAFYMFRLYFLTFEGEFRGNDTAMQAQLLSAAGKD 476 Query: 450 ---SQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPI 485 + + + +L V VL+G P Sbjct: 477 PSEHHAHGGSVHESAWPMAAPLAVLAVPSVLIGLLGTPW 515 >UniRef50_C4ZJD8 NADH/Ubiquinone/plastoquinone (Complex I) n=2 Tax=Proteobacteria RepID=C4ZJD8_THASP Length = 911 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 114/509 (22%), Positives = 193/509 (37%), Gaps = 30/509 (5%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L + LI F R G + +AL L + + Sbjct: 1 MLASIGLIAFAMLAAVPLVGRLGERAGWVLALA----------PLAAFVHFLVHMPTVAG 50 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEI--EKYQGFFHLN 119 + W+P G+ + +DGLSLL +L +G L VL + + + G FH Sbjct: 51 GGVVTSSLAWVPALGVELAFRLDGLSLLFALLITGIGTLIVLYAGAYLSDHHHLGRFHAC 110 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 L+ + ++G+ LA D+ F FWE+ V + LIA KA + + A Sbjct: 111 LLGFMAAMLGLVLADDLIAMFVFWELTSVCSFLLIAFQHDKAESRRAALQA--------L 162 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 +A+LA + + + G W F+ + ++ I K +P Sbjct: 163 LITGGGGLALLAGLILLGSVGGSWQFSGLS-GEAIAEHALYPAILALVLIGAFTKSAQLP 221 Query: 240 LHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 H WLP+A + APT S + ++K Y L R + L S + I + +G Sbjct: 222 FHLWLPNAMA-APTPVSAYLHSATMVKAGVYLLARLNPAL--GGSTSWGTILITVGAATA 278 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFIL 358 GA +A QTD+KR++AYT+V+ +G +++ + T + Q I ++AH A LF+ Sbjct: 279 LVGAVLAIRQTDLKRVLAYTTVTVLGQLVMLLGTNTHYGLQAFAIYLVAHAFYKAALFMA 338 Query: 359 CGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ-- 416 G + TR + ++GGL M A + G+P F+ + G + Sbjct: 339 VGAIDHATGTRQIALLGGLIRHMPLTGFAVALAAFSNAGLPPFFGFIAKEFKYAGLIELG 398 Query: 417 -VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLL 475 V T + + + RA+ G + Q +SL +LL + Sbjct: 399 VAGWVTTAVMILTNALLLTAAGLVFVRAFLG--REGRYPQPPHEVSLPMWLGPMLLAIGG 456 Query: 476 VLLGFYPQPILDTSHSAIGNIQQWFVNSV 504 + G + A V Sbjct: 457 FVFGAFNNLAEVWLIDAAVQAVSRATVPV 485 >UniRef50_A6DPK7 NADH-ubiquinone/plastoquinone family protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DPK7_9BACT Length = 766 Score = 295 bits (757), Expect = 2e-78, Method: Composition-based stats. Identities = 108/498 (21%), Positives = 206/498 (41%), Gaps = 27/498 (5%) Query: 1 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI 60 M L + + + F+ F RF R + I + L + + Sbjct: 1 MFLLFSVALIFLAAFATPALARFIPNKRRALFAIVPATSFYLIFSKAQEIASGTS----- 55 Query: 61 PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQG--FFHL 118 D WIPRFGI+++ +DGLS LM +L +G L ++ + ++ Y+ F+ Sbjct: 56 ----LSEDYTWIPRFGINLNFRLDGLSFLMALLITGIGTLILIYAAGYLKDYKANTRFYT 111 Query: 119 NLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYT 178 + + ++G+ L+ ++ F FWE+ V + L+ K + A I T Sbjct: 112 IIQIFMAAMLGLVLSDNLISMFIFWELTTVSSFLLVGFNHENPDARKKALQA----LIVT 167 Query: 179 QASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVV 238 GL ML +L L + + EL+ + + +++ + K Sbjct: 168 AGGGLAMLAGLLLLGNIAGTYQVSELIQHSELIK---NHKLYEAVVILVCLGAFTKSAQF 224 Query: 239 PLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIG 297 P H WLP+A + APT S + ++K + L R + L + + + + +G Sbjct: 225 PFHFWLPNAMA-APTPVSAYLHSATMVKAGVFLLARLTPVL--GGTDFWMYLLVCVGGFT 281 Query: 298 IFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFI 357 + A + D+K+++AY+++S +G + + I G++ +++ A++ + AH L A LF+ Sbjct: 282 MLLAATLGLIYRDLKKILAYSTLSVLGIITLLIGMGTEFSFKAAIMMLFAHALYKATLFM 341 Query: 358 LCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV 417 + G + TRD+ + GL M W A + A++ G P F+ + + Sbjct: 342 VAGSIDHEAGTRDITKLRGLRKVMPWTFAAAALAALSQAGFPPFTGFLAKEYFYGSALDH 401 Query: 418 VPVITVI--STFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLL 475 +I + +F V + + + + G+A +I L + L L Sbjct: 402 NLKAVLISSAFISSMFLFVLAFKIGFQPFLGRANKKI---HAHEAPPSMLLGPIALGSLS 458 Query: 476 VLLGFYPQPILDTSHSAI 493 +L G +P PI S Sbjct: 459 LLFGLFPGPIAKYILSPA 476 >UniRef50_B5YKJ0 NADH-quinone oxidoreductase chain l n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKJ0_THEYD Length = 630 Score = 295 bits (757), Expect = 2e-78, Method: Composition-based stats. Identities = 113/522 (21%), Positives = 198/522 (37%), Gaps = 34/522 (6%) Query: 5 WLILIPFIGGFLCWQTERF-GVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQW 63 ++L P G RF KV W ++++ +L ++L Q T I W Sbjct: 7 LILLFPLAGFLFNILIGRFISPKVVSWAGVLSILGSLVVALFAIAQVFSGKTIEYNIYTW 66 Query: 64 QSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQG--FFHLNLM 121 D +S ID L+ +M+ + +G L + S + G + L Sbjct: 67 ILSDD------LKVSFGYLIDQLTAVMLFVVCFVGWLIHIYSVGYMHGDPGYPRYFAYLN 120 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 + ++ + + ++ + +F WE + + YFLI W HK KT A K FI + Sbjct: 121 LFVFSMLMLVMGNNLVMLYFGWEAVGLCSYFLIGFWYHK----KTASDAGKKAFIVNRIG 176 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYE------ELLNTPMSSGVEYLLMLGFFIAFAVKM 235 + I L Y F L + + L+ L F K Sbjct: 177 DFGFALGIFLLFINVYALNYTDIFPKIPGLQGHTLNIFGWNIDLITLIALLLFCGAVGKS 236 Query: 236 PVVPLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLG 294 +PLH WLPDA + PT S A ++ + + R + S + G Sbjct: 237 AQIPLHVWLPDAM-EGPTPVSALIHAATMVTAGVFMVARLNPI--YGMSEIALAVVAITG 293 Query: 295 VIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAG 354 + F+ A +A Q D+KR+IAY+++S +G++ I AY + + H A Sbjct: 294 AVTSFFAATIALVQRDMKRIIAYSTISQIGYMFIGCGMA---AYGAGIFHLYTHAFFKAL 350 Query: 355 LFILCGQLYERI-HTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFG 413 LF+ G + + D+ MGGL KM L ++ G+PG F + IL+ Sbjct: 351 LFMGAGSVMHAMAGELDIYKMGGLRKKMPITYITFLIASLTIAGIPGFSGFFSKDEILWA 410 Query: 414 SFQ----VVPVITVISTFGLVFASVYSLAMLHRAYFGKAK-SQIASQELPGMSLRELFMI 468 +F I ++ T + Y+ +L A+ GK + + + + + Sbjct: 411 AFASAKPYGKFIWLLGTITAALTAFYTFRILFVAFHGKFRGTPEEFKHVHESPPIMTVPL 470 Query: 469 LLLVVLLVLLGFY--PQPILDTSHSAIGNIQQWFVNSVTTTR 508 ++L + V++G++ P + + V T Sbjct: 471 IVLAIGSVIVGYFSIPHFLEPVIPKPVFAAPHEQERVVMTMS 512 >UniRef50_A0RME0 NADH-quinone oxidoreductase chain m n=1 Tax=Campylobacter fetus subsp. fetus 82-40 RepID=A0RME0_CAMFF Length = 495 Score = 295 bits (757), Expect = 2e-78, Method: Composition-based stats. Identities = 121/507 (23%), Positives = 247/507 (48%), Gaps = 19/507 (3%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L +I +PFI G L F K + A + + L L L+ + + Sbjct: 7 ILSLIIFLPFIVGVLIALF--FNDKAGKLTAFVVSIVVAVLGLVLFFKFDPN-------A 57 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLM 121 Q + +P++GIS + +DG++L ++++ ++ + + N++ Sbjct: 58 GMQFVDSISLVPKYGISYLVGVDGINLYILLIITSAFPPLFF----ILKNRKKGYWANML 113 Query: 122 WILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQAS 181 ++ G + V ++D+ F+ WEMML+P++ ++ ++G R A Y Sbjct: 114 FMQSGFLSVVSSLDLVYFYAGWEMMLIPIFIMVGIYG----KDSGRAGALMDMMYYAIFG 169 Query: 182 GLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLH 241 ++ML AI+ + HY G ++F E+L+ ++S ++ +L F +AF +K+P+ P H Sbjct: 170 SMIMLGAIIYIGAAHYYEFGFFSFRLEDLIKVSLNSDLQTVLFFCFMLAFVIKLPLFPFH 229 Query: 242 GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG 301 W+ +A++++ T + L+ I K A + +LRF LPLFP + ++ + LG+ + Y Sbjct: 230 LWMSNAYTKSLTTATFMLSVIASKVAVFAILRFVLPLFPVSFVNYSTWFISLGLFSMLYF 289 Query: 302 AWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQ 361 A D K L+AY S SH+G ++ ++ A G++ Q++AH +++ +F+L G Sbjct: 290 GIAAIKVKDFKTLLAYASASHLGLIIAGVFALDVEAMTGSMYQVVAHAITSGIMFLLVGM 349 Query: 362 LYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVI 421 + E++ TR + +GGL K + ++++G+P T FVGE +I+FG F+ + Sbjct: 350 ISEQLGTRKISKLGGLAIKAPVFATIFAIAMISSVGLPATVGFVGELLIIFGLFKANLIY 409 Query: 422 TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 + T +V ++Y + +A + + + RE+ L+ V ++ ++G Y Sbjct: 410 GIFGTTSIVIGAIYMFIVYRKAILQNTNE--LTAKFKDLRKREILAFLVAVAMIFIMGIY 467 Query: 482 PQPILDTSHSAIGNIQQWFVNSVTTTR 508 P+P + + + ++ + Sbjct: 468 PKPFIKQIEPTMNERYESYIKPNLGAK 494 >UniRef50_Q9UYP1 Hydrogenase 4, component F or formate hydrogen lyase, subunit 3 n=1 Tax=Pyrococcus abyssi RepID=Q9UYP1_PYRAB Length = 499 Score = 294 bits (754), Expect = 5e-78, Method: Composition-based stats. Identities = 113/510 (22%), Positives = 216/510 (42%), Gaps = 27/510 (5%) Query: 8 LIPFIGGFLCWQTE---RFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQ 64 +IP + F K+ + AL+ GLTL + +L+ S Sbjct: 9 IIPLVFAFALPLFSVVVGGNRKIIQAYALLGTGLTLISTFKLFQLTYSSSLPIVYTFG-- 66 Query: 65 SEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGF--FHLNLMW 122 W GI +D LS L+ ++T +L L + S++ +E+ +G ++ + Sbjct: 67 -----KWRAPIGIVYE--VDRLSSLIALVTAVLMFLIAIYSYRYLEREKGLEWYYTLYLG 119 Query: 123 ILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASG 182 + G++GV L D F F E+ + Y L+ + D K + A K+ + Sbjct: 120 LESGLLGVLLTGDAFNLFVMIEVTSIAAYALVMFY----RDRKDSVLAGLKYALIGAVGT 175 Query: 183 LVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHG 242 + +A+ E+L ++ + ++ AF +K + P H Sbjct: 176 TMYFLALGVFYGTFGTVNFAD--LSEKLHSSGNVVLASSVALVLATWAFLIKATIFPNHF 233 Query: 243 WLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPI---AMWLGVIGIF 299 WLP+AH AP+ S L+G+++ Y ++RF L+ S + + LG I Sbjct: 234 WLPEAHPAAPSPISAILSGLVVNVGVYAMIRFLYTLYSGLSWIIGWLSFAIIILGAISSI 293 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 +GA M Q D+KRL+AY+++ HMG++L+A+ G+QL Q A+ +I H ++ A LF+ Sbjct: 294 FGALMMNTQRDVKRLVAYSTIMHMGYLLMAVGVGTQLGLQAALFHLINHAIAKALLFLAV 353 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP 419 G +R++ + GL KM ++ +G+P F + ++ + Sbjct: 354 GVFIHVAGSRNIDDLAGLGRKMPITTFSLAIATLSLVGIPPLNVFFSKLLLFNALLEKSF 413 Query: 420 VITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLG 479 + ++ V A V + +L+ + GK + + +E S+ + L+L ++ + +G Sbjct: 414 FLALVIAVTSVIALVAYMRVLYTLWLGKPREDLDVKE----SISMSMICLILALICIAIG 469 Query: 480 FYPQPILDTSHSAIGNIQQWFVNSVTTTRP 509 +L+ + + V P Sbjct: 470 LIAPIVLEKLINPAVIQAMDYETYVRAALP 499 >UniRef50_A4XS82 NADH dehydrogenase (Quinone) n=1 Tax=Pseudomonas mendocina ymp RepID=A4XS82_PSEMY Length = 906 Score = 294 bits (754), Expect = 5e-78, Method: Composition-based stats. Identities = 115/509 (22%), Positives = 194/509 (38%), Gaps = 30/509 (5%) Query: 2 LLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 +L L LI T G + L + L + Sbjct: 1 MLYLLSLIALAAVSAPALTRLLGARTGW----------LLMLAPLVAFIWFVQQIPLVAG 50 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQ--GFFHLN 119 + WIP GI++ L +DGLSLL +L +G L VL + + + G FH Sbjct: 51 GETVLQSLSWIPALGINLSLRLDGLSLLFALLISGIGSLIVLYAGSYLSSHVHLGRFHAY 110 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 L+ + ++G+ LA D+ F FWE+ + + LI+ KA + + Sbjct: 111 LLVFMLAMLGLVLADDLVAMFVFWELTSIASFLLISFQHDKAVSRRAALQ--------AL 162 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 +A+LA + + ATG W F+ + +ML + K VP Sbjct: 163 LITGGGGLALLAGLILLGGATGNWQFSSLS-AEQIEGHALLPAIMLLVLLGCFTKSAQVP 221 Query: 240 LHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI 298 H WLP+A APT S + ++K Y L R + L S + + + G Sbjct: 222 FHLWLPNAM-NAPTPVSAYLHSATMVKAGIYLLARLNPVL--GGSIGWGTLLITFGAATA 278 Query: 299 FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFIL 358 GA++AF QTD+KRL+AYT+V+ +G + + I T + Q V+ ++AH L LF+ Sbjct: 279 VLGAFLAFRQTDLKRLLAYTTVTVLGQLTMLIGTNTSYGLQAFVLYLVAHSLYKGALFMA 338 Query: 359 CGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQV- 417 G + TR++ +GGL M A A + G+P F+ + G ++ Sbjct: 339 VGAIDHATGTRELARLGGLIRFMPLTGAAVALAAFSNAGLPPFFGFIAKEFKYSGLIEMG 398 Query: 418 --VPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLL 475 +T++ + + + + G + + + L +LL + Sbjct: 399 HIGWAVTLVMILTNALLFAAAGLVFLQTFLG--RRGDYPRTPHEVGLPMWLGPMLLAIGG 456 Query: 476 VLLGFYPQPILDTSHSAIGNIQQWFVNSV 504 LG + + V Sbjct: 457 FFLGAWNAWPETWLVNTAVQAVARGPVDV 485 >UniRef50_C7R7H2 Proton-translocating NADH-quinone oxidoreductase, chain L n=4 Tax=Gammaproteobacteria RepID=C7R7H2_KANKD Length = 672 Score = 294 bits (753), Expect = 6e-78, Method: Composition-based stats. Identities = 111/515 (21%), Positives = 208/515 (40%), Gaps = 50/515 (9%) Query: 3 LPWLILIPFIGGFLCWQTE-RFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIP 61 L ++L P IG L R G ++ + +I + ++ LSL+++ Y P Sbjct: 7 LLLIVLAPLIGAMLAGLLGKRLGRRLTHRLTIIGVVISFILSLRIFWGFLYG----DATP 62 Query: 62 QWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQG--FFHLN 119 + + I I ID LS LM+V+ + ++ + S + G F Sbjct: 63 VDMTVYHWASFSDLTIQIGFMIDSLSALMMVVVTFVSLMVHIYSIGYMHDDDGYQRFFSY 122 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 L ++ + +A + FF WE + + Y LI W K ++ I A K F+ + Sbjct: 123 LSLFTFSMLMLVMANNFLQLFFGWEAVGLVSYLLIGFWYQK----ESAIFANMKAFLVNR 178 Query: 180 ASGLVMLIAILALVFVHY--------------------------NATGVWTFNYEELLNT 213 ++ I A+ + NA G+ + + + Sbjct: 179 VGDFGFILGIGAIFLLFGTFDYAPIFKSMGQAEEIMQISERSAENALGLMSLDGSFVAWG 238 Query: 214 PMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLL 272 S + + + FI K VPLH WLPD+ + PT S A ++ + + Sbjct: 239 DTSWPIITFICICLFIGAMGKSAQVPLHVWLPDSM-EGPTPISALIHAATMVTAGVFMVA 297 Query: 273 RFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYT 332 R S S + +G I + +A Q DIKR+IAY+++S +G++++A+ Sbjct: 298 RMSPLF--EFSETALTMVTIIGAITALFMGLVAIVQNDIKRIIAYSTLSQLGYMVVALGV 355 Query: 333 GSQLAYQGAVIQMIAHGLSAAGLFILCGQLYER-IHTRDMRMMGGLWSKMKWLPALSLFF 391 AY A+ + H A LF+ G + H +++R MGGL+ ++ +L Sbjct: 356 S---AYSAAIFHLFTHAFFKALLFLGAGSVIVALHHEQNIRKMGGLYKRLPLTYWTTLVG 412 Query: 392 AVATLGMPGTGNFVGEFMILFGSFQVVPVITVIS----TFGLVFASVYSLAMLHRAYFGK 447 +A +G P F + I+ + + + G+V ++YS+ ML + GK Sbjct: 413 TLALIGTPFFAGFYSKDAIIMAASEAQGPAASFAYFAVMAGVVVTALYSMRMLLVVFHGK 472 Query: 448 AK-SQIASQELPGMSLRELFMILLLVVLLVLLGFY 481 + + +L + ++ L V +++G++ Sbjct: 473 SSLDEQHLNQLTESPRVITWPLIALAVPSLIIGWF 507 >UniRef50_B8J1C9 Proton-translocating NADH-quinone oxidoreductase, chain L n=4 Tax=Bacteria RepID=B8J1C9_DESDA Length = 642 Score = 294 bits (753), Expect = 6e-78, Method: Composition-based stats. Identities = 106/482 (21%), Positives = 186/482 (38%), Gaps = 31/482 (6%) Query: 13 GGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWI 72 + R+ W+ + + ++L S+ + +A + W + Sbjct: 15 AFAVTLVCGRWWGSRAHWLPIAAIVVSLCCSILALRDVMNGVIVNADVHNWITS------ 68 Query: 73 PRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQG--FFHLNLMWILGGVIGV 130 +S +D L+ +M+++ + L + S ++ G F L ++ + Sbjct: 69 GNLSVSFGFLVDQLTAVMLIVVTSVSTLVHIYSVGYMKGEDGYYRFFAYLALFSFSMLML 128 Query: 131 FLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAIL 190 L+ + FF WE + + Y LI + K S A K FI + L+ + Sbjct: 129 VLSNNFLQLFFGWEAVGLSSYLLIGFYYEKTSASD----AGKKAFIVNRFGDFGFLLGLF 184 Query: 191 ALVFVHYNATGVWTFNYEELLN------TPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWL 244 + + + F LL +S L+ L F A K +PLH WL Sbjct: 185 CIFTLFGSLHYDNVFARAGLLQGLSYTIGGISIDAATLVCLLLFCGAAGKSAQLPLHVWL 244 Query: 245 PDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAW 303 PDA + PT S A ++ + + R + + S + +G + + A Sbjct: 245 PDAM-EGPTPVSALIHAATMVTAGVFLVARCNALF--SLSPTALGVITVVGALTALFAAT 301 Query: 304 MAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLY 363 +A QTDIKR++AY+++S + F+ I G AY + + H A LF+ CG + Sbjct: 302 IALTQTDIKRVVAYSTISQLAFMFIGCGVG---AYAAGIFHLFTHAFFKALLFLGCGSVI 358 Query: 364 E-RIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ----VV 418 H +DMR MGGL M L +++ G+PG F + IL +F Sbjct: 359 LGMHHEQDMRRMGGLRKYMPVTCVTFLLASLSISGVPGLAGFFSKDEILLMAFNADTTAG 418 Query: 419 PVITVISTFGLVFASVYSLAMLHRAYFGKAK-SQIASQELPGMSLRELFMILLLVVLLVL 477 + TF + YS + ++G+ + +Q + L L +LLL V Sbjct: 419 YFAWGVGTFVAFLTAFYSFRLFFSIFYGEFRGTQHQREHLRESPLVVTIPLLLLACGAVG 478 Query: 478 LG 479 G Sbjct: 479 AG 480 >UniRef50_D2BHY2 NADH:quinone oxidoreductase subunit 5 (Chain L) n=5 Tax=Dehalococcoides RepID=D2BHY2_DEHSV Length = 654 Score = 294 bits (753), Expect = 7e-78, Method: Composition-based stats. Identities = 102/484 (21%), Positives = 191/484 (39%), Gaps = 24/484 (4%) Query: 3 LPWLILIPFIGGFLCWQTERF---GVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAG 59 L ++L+P I G L F + ++ + +G +L LS+ S Sbjct: 6 LWLIMLLPLICGALIAMGYAFFCKKPALSGYLGIAGVGGSLLLSIWGLTGLLGKEGVSHY 65 Query: 60 IPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQG--FFH 117 + IS++L D L+ +M + + ++ + S + +G ++ Sbjct: 66 ASGFSWFSIGN---SVDISLNLNFDPLAGIMCFVILFVSLMVHIYSQGYMHGDKGYPRYY 122 Query: 118 LNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIY 177 L + ++G+ L+ ++ FFFWE++ + Y LI W + + FI Sbjct: 123 AFLSFFTASMLGLVLSDNLLFTFFFWELVGLASYLLIGFWFTRPAAANAAKK----AFIV 178 Query: 178 TQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPV 237 T+ + L AIL L E+ + +G + LG F K Sbjct: 179 TRIGDVGFLAAILILFANTGTLDINSLNGMAEM--GFIGAGTVTVAALGIFAGAVGKSAQ 236 Query: 238 VPLHGWLPDAHSQAPTAGSV-DLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVI 296 PLH WLPDA + PT S A ++ + + R +SA +G + Sbjct: 237 FPLHVWLPDAM-EGPTPVSALIHAATMVAAGVFLVARTYPIF--ESSATAMLWVSIIGAV 293 Query: 297 GIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLF 356 + A MA D+KR++AY++VS +G++++ + TG + + H + LF Sbjct: 294 TAIFAATMALVMNDMKRILAYSTVSQLGYMMLGLGTG---GIAIGIFHLFNHAFFKSLLF 350 Query: 357 ILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQ 416 + G + T D+R MGGL M L +++ G+ F + IL G+ Sbjct: 351 LGSGSVNHATGTFDIREMGGLSKPMPVTSKTFLIASLSLAGIWPLSGFFSKDEILAGAMD 410 Query: 417 VVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLV 476 ++ +++ + + Y + A+ G + + + +L+LVV V Sbjct: 411 GQVILFILALITVFLTAFYMFRLYFVAFGGTYRGK---GHPHESPKVMSWPLLILVVPSV 467 Query: 477 LLGF 480 + G Sbjct: 468 ISGL 471 >UniRef50_B3QPF9 NADH dehydrogenase (Quinone) n=1 Tax=Chlorobaculum parvum NCIB 8327 RepID=B3QPF9_CHLP8 Length = 774 Score = 294 bits (753), Expect = 7e-78, Method: Composition-based stats. Identities = 113/505 (22%), Positives = 210/505 (41%), Gaps = 27/505 (5%) Query: 3 LPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQ 62 L +LI+ F + R W + A + L Sbjct: 6 LLFLIITGFAVSAIAPYLYRLLKARFVWFGVAFPLTLFA---------SFMLKYPQVASG 56 Query: 63 WQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQG--FFHLNL 120 W+P G+++ +DGLSL V+L L+G L + + Y+ F + Sbjct: 57 VPVRERWSWVPSLGLNLSFVLDGLSLTFVMLVTLIGAAVFLYASVYLRHYEEADRFFGFI 116 Query: 121 MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA 180 + ++GV LA +M L F FWE+ + + LI H + +A K + T A Sbjct: 117 GMFMTSMLGVVLADNMLLLFLFWELTSISSFLLIGFNHHAPTSRA----SALKALLVTGA 172 Query: 181 SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL 240 GL +L +L L V + + +L+ S + ++ + K P Sbjct: 173 GGLALLAGMLLLGSVTGSFEISSFYAMNDLIT---SHRLYPAIVALILVGAFTKSAQFPF 229 Query: 241 HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY 300 H WLPDA + + + ++K Y + RF+ + +A + + G + + Sbjct: 230 HFWLPDAMAAPSPVSAYLHSATMVKAGIYLIARFNHEI--GGTALWQDTILVAGATTMIF 287 Query: 301 GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG 360 +++ Q+D+KRL+AY+++S +G +++ + GS+LA + I +IAH L LF++ G Sbjct: 288 AGLLSYRQSDLKRLLAYSTLSVLGTLVMLLGIGSKLAIKAFFIYLIAHSLYKGTLFLVAG 347 Query: 361 QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV 420 L TRD+ +GGLW M + + + +G+ F+G+ + +V P Sbjct: 348 TLDHETGTRDVSKLGGLWKAMPVTAVTAALASFSMMGVIPLIGFIGKETLYKAVLEVQPW 407 Query: 421 ---ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVL 477 + V++ V + + R + GK + ++ Q++ + L +L + +L Sbjct: 408 GRVLIVLAVAASALLVVVTFLVGFRPFLGKPRPEL--QKVHEAPVAMLVGPFILALSGLL 465 Query: 478 LGFYPQPILDTS--HSAIGNIQQWF 500 LG +P + SA+ I Q Sbjct: 466 LGLFPDFFVGHLLEESAVSIISQRL 490 >UniRef50_A1API0 Proton-translocating NADH-quinone oxidoreductase, chain M n=2 Tax=Pelobacter propionicus DSM 2379 RepID=A1API0_PELPD Length = 534 Score = 294 bits (753), Expect = 7e-78, Method: Composition-based stats. Identities = 153/509 (30%), Positives = 274/509 (53%), Gaps = 27/509 (5%) Query: 1 MLLPWLILIPFIGGFLCWQTE-RFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAG 59 +L+ L +P +G K+ R ++ M L ++ ++ G + Sbjct: 6 LLILALFCLPLVGALAVPFLPASENGKIARMWGMLCMLAVLVMAGGIFAGFG-----TPC 60 Query: 60 IPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLN 119 +P + ++PW+ GI+ HLA+DGL++ +++LTGLL + + C WK E F Sbjct: 61 LPASLLDLNIPWVGSLGINFHLAVDGLNIYLLLLTGLLFPVVLGCCWKRPETQNNLFVAM 120 Query: 120 LMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQ 179 +++ ++G FLA ++ LFF FWE++L+PM+ ++ +G G+ + +AA FF+YT Sbjct: 121 ALFLEATLLGTFLAQNLMLFFVFWEVVLIPMFIIVLAFG-----GENKRSAAFTFFMYTM 175 Query: 180 ASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVP 239 A ++ L A++ + N TG W F + L+ + + + + +A A+K P+ P Sbjct: 176 AGSILFLAAVIMMGMESLNQTGAWNFEFAHLMALKLDWNTQLFVFIAVMLACAIKCPLFP 235 Query: 240 LHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIF 299 H WLP A+ +AP AG+ +AG L K A+G+++ +LPL P+ + F P M VI I Sbjct: 236 FHSWLPLAYYEAPPAGTALMAGALSKMGAFGIIKLALPLCPDVARAFGPTVMLFAVISIL 295 Query: 300 YGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC 359 YGA +A QTD K+L+A++S+SHMG++++ I++ Q A GA+ Q+++HG++ AGLF+L Sbjct: 296 YGAIIALKQTDFKKLVAFSSLSHMGYIVLGIFSFHQAAIHGALFQILSHGVAVAGLFLLL 355 Query: 360 GQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVP 419 G L R+ + + L + L + + F +A++ +P T F EF+ILFG+FQ Sbjct: 356 GLLELRLGREYLN-LTALSTHAPRLAVMLMLFILASVALPLTSGFTSEFLILFGAFQQGI 414 Query: 420 VI------------TVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFM 467 ++++ G+V + Y L +G+ K + + MSL E Sbjct: 415 AALQANQGATMLTSVLLASTGMVLGATYMLRFGRAILYGQTKEGV---GVKDMSLMEGIG 471 Query: 468 ILLLVVLLVLLGFYPQPILDTSHSAIGNI 496 + L+V+++ +G P PI++ +A+ + Sbjct: 472 FIPLLVMIIWIGVNPMPIMNKVTTAVSAL 500 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.316 0.177 0.544 Lambda K H 0.267 0.0543 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,933,215,224 Number of Sequences: 3077464 Number of extensions: 241817265 Number of successful extensions: 1581942 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 5257 Number of HSP's successfully gapped in prelim test: 5598 Number of HSP's that attempted gapping in prelim test: 1511856 Number of HSP's gapped (non-prelim): 30535 length of query: 509 length of database: 1,040,396,356 effective HSP length: 133 effective length of query: 376 effective length of database: 631,093,644 effective search space: 237291210144 effective search space used: 237291210144 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (20.7 bits) S2: 96 (41.2 bits)