26 c3mi6A_ Probab=46.02   E-value=16  Score=14.79  Aligned_columns=240  Identities=10%

Q ss_pred             CCCEEEEECCEEEEEEE-CCCCEEEEEEECCCCCCCCCCCCEEEECCCCCCCC----------------CEEECCCCCCC
Q ss_conf             76359998775999997-69935889995057034479995798317876642----------------00001102577
Q batch____        57 QGKLISVKTDVLDLTIN-TRGGDVEQALLPAYPKELNSTQPFQLLETSPQFIY----------------QAQSGLTGRDG  119 (548)
Q Consensus        57 ~~~~i~i~n~~~~~~is-~~Gg~I~~~~Lk~y~~~~~~~~p~~L~~~~~~~~~----------------~~~~~l~~~~~  119 (548)
                      +.+.+.|.|+...++|. ..+|.+..+..=.--....+...+...+.......                ....|.-....
T Consensus         7 ~~~~~~L~~~~~s~v~~~~~~g~~~~~y~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~p~~g~g~~~~   86 (742)
T c3mi6A_           7 ANLTFHLQTDHTSYIFQIXKNGEAGQIYYGPRIHVQPTYQNLXSQEWRDATPSLNEENPNFQPATIKAEYASLGKGDFRQ   86 (742)
T ss_dssp             TTTEEEEECSSEEEEEEECTTSSEEEEEEEECCCCCSCCTGGGCCCCCSSSCCSCTTCTTCCGGGSCBSSCCSSSSCCSC
T ss_pred             CCCEEEEECCCEEEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC
T ss_conf             77679997599389999879996899972665577776354322002466666666665668434476475357987877


Q ss_pred             CCCCCCCCCCCEEECCCCEE-------------------EECCCCCEEEEEEEECCCCEEEEEEEEECCCCEEEEEEEEE
Q ss_conf             65444666751131266157-------------------40288833899999769974999999980897599999999
Q batch____       120 PDNPANGPRPLYNVEKDAYV-------------------LAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNV  180 (548)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~v~~~~~~~~g~~i~k~yt~~~~~Y~~~~~~~v  180 (548)
                      +...+...+....+.-....                   ...+...+.+++. +...++.++..|++.++.=.+....+|
T Consensus        87 pal~~~~~~g~~~~~~~~~~~~i~~~k~~~~~lp~~~~~~~~~~~~l~i~l~-D~~~~l~v~l~y~~~~~~~vi~~~~~i  165 (742)
T c3mi6A_          87 PAFQVTQANGSRITELTYDHYQLLTGKQRLANLPSTFDDTDDDAQTLVVSFN-DRITGLALDLNYSIFPHQDVIVKSAKF  165 (742)
T ss_dssp             CSEEEECTTSCCCCCEEEEEEEEEESCCCCSSSCCCCCCSCCCCEEEEEEEE-ETTTCCEEEEEEEEEGGGTEEEEEEEE
T ss_pred             CEEEEEECCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEE-ECCCCEEEEEEEEEECCCCEEEEEEEE
T ss_conf             4599992888700025994478622665545664310025687028999999-267674999999996899869999999


Q ss_pred             EECCCCCEEECCCCEEECCCCCCCCCCCCCCCEEEEEEECEEEEECCCCEEECCCCCCCCCCCEECCCCCCEEEEEECC-
Q ss_conf             8468873320222012115776654444445314320001057704884321114444556630014774379996204-
Q batch____       181 QNAGEKPLEISSFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNENLNISSKGGWVAMLQQY-  259 (548)
Q Consensus       181 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~kY-  259 (548)
                      +|.|+.++.+........+.      +............-+.=..............++...........-|+++.+.- 
T Consensus       166 ~N~g~~~v~l~~~~S~~l~~------p~~~~~l~~~~G~W~~E~~~~~~~L~~G~~~~~s~~g~ssh~~~P~~~l~~~~~  239 (742)
T c3mi6A_         166 TNPSSEKLVLNRALSSQLDL------PDANYDLIQFSGTWARERHLYRHPLRPGXQSISSLRXASSHQQNPFXXLARPQT  239 (742)
T ss_dssp             ECCSSSCEEEEEEEEEEEEE------SCCCCEEEEEEEETTEEEEEEEEECCSEEEEEECCSSSSCSSBCSCEEEECTTC
T ss_pred             EECCCCCEEEEEEECCCCCC------CCCCEEEEEEECCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCEEEECCCCC
T ss_conf             98799958986320110568------855558999527765557616778146723401554125865475100046777


Q ss_pred             -------EEEEEEECCCCCEEEEEECCCCCEEEEEECCCCC--EECCCCCEEE
Q ss_conf             -------5999960788831488602688615888506662--2267874036
Q batch____       260 -------FATAWIPHNDGTNNFYTANLGNGIAAIGYKSQPV--LVQPGQTGAM  303 (548)
Q Consensus       260 -------F~s~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~pg~~~~~  303 (548)
                             |...+.=..+....+.....+.-....+......  .++||++.++
T Consensus       240 ~e~~G~v~g~~l~~SGn~~~~ve~~~~~~~r~~~G~~~~~~~~~L~pGesf~T  292 (742)
T c3mi6A_         240 TDEQGAVFGFNLVYSGNFLDAIEVDQYSTSRILTGINPDEFGWNLAPQATFQT  292 (742)
T ss_dssp             CSSSBCEEEEEESCCSSEEEEEEECTTSCEEEEEEECSTTCCEEECTTCEEEC
T ss_pred             CCCCCCEEEEEEEECCCEEEEEEECCCCCEEEEEECCCCCCCEEECCCCEEEE
T ss_conf             86666278999996382489999878983799962066678378279984874