15 c2cisA_ Probab=95.65   E-value=0.13  Score=27.55  Aligned_columns=129  Identities=16%

Q ss_pred             CCCCCCCEEEE---ECCEEEEEEECCCCEEEEEEECCCCCCCCCCCCEEEECCCCC-----------CCCCEEECCCCCC
Q ss_conf             66667635999---877599999769935889995057034479995798317876-----------6420000110257
Q batch____        53 PASGQGKLISV---KTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLLETSPQ-----------FIYQAQSGLTGRD  118 (548)
Q Consensus        53 ~~~~~~~~i~i---~n~~~~~~is~~Gg~I~~~~Lk~y~~~~~~~~p~~L~~~~~~-----------~~~~~~~~l~~~~  118 (548)
                      |-...++.+++   +|+..++++++.||.|.|+..        +++++.-..+.+.           ......+|=...+
T Consensus         1 ~~~~~~~~v~l~~~~n~~~~~~V~~~Ga~l~s~~~--------~g~e~l~~~~~~~~~~~~~~rggip~~~P~~G~~~~~   72 (287)
T c2cisA_           1 PIKETDKEVVLTHPADETTSVHILKYGATVYSWKL--------KSEEQLWLSTAAKLDGSKPVRGGIPLVFPVFGKNSTD   72 (287)
T ss_dssp             CEEECSSEEEEEETTEEEEEEEEETBTTEEEEEEE--------TTEECBCBCTTCCCSSSSCCSBSBCEEBSCSSCCSSS
T ss_pred             CCCCCCCEEEEEECCCCCEEEEEECCCCEEEEEEE--------CCEEEEECCCHHHCCCCCCEECCEEEECCCCCCCCCC
T ss_conf             98767867999932698489999768869999985--------8876775184777057775141137854411676778


Q ss_pred             CCCCCCCCCCCCEEECCCCEEEECCCCCEEEEEEEE-----------CCCCEEEEEEEEECCCCEEEEEEEEEEEC-CCC
Q ss_conf             765444666751131266157402888338999997-----------69974999999980897599999999846-887
Q batch____       119 GPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYT-----------DAAGNTFTKTFVLKRGDYAVNVNYNVQNA-GEK  186 (548)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-----------~~~g~~i~k~yt~~~~~Y~~~~~~~v~n~-~~~  186 (548)
                      +.....+..-..............+... .|++++.           -+-.+.++.+|+|.+++  +.++++|+|. +.+
T Consensus        73 g~~~~lp~HGf~r~~~W~v~~~~~~~~~-~v~~~l~~~~~~~~~~~~yP~~~~~~~~y~L~~~~--L~~~~~v~N~~~~~  149 (287)
T c2cisA_          73 EHLSKLPQHGLARNSTWEFLGQTKENPP-TVQFGLKPEIANPELTKLWPMDYLLILTVELGSDY--LKTAIEVENTSSSK  149 (287)
T ss_dssp             TTGGGSCTTBSGGGSBCEEEEEEEETTE-EEEEEECGGGSCHHHHHHSCCCCEEEEEEEECSSC--EEEEEEEECCCSSC
T ss_pred             CEECCCCCCCCCCCCEEEEEEEECCCCC-EEEEEEEECCCCHHHHCCCCCEEEEEEEEEECCCE--EEEEEEEEECCCCC
T ss_conf             7102655246513770689997237887-39999997378956643698328999999974995--99999999889877


Q ss_pred             CEEECC
Q ss_conf             332022
Q batch____       187 PLEISS  192 (548)
Q Consensus       187 ~~~~~~  192 (548)
                      ++....
T Consensus       150 ~~p~~~  155 (287)
T c2cisA_         150 ELKFNW  155 (287)
T ss_dssp             CEEEEE
T ss_pred             CEEEEC
T ss_conf             402103