97 c2v1uA_ Probab=99.20   E-value=1.4e-08  Score=77.86  Aligned_columns=226  Identities=17%

Q ss_pred             HHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHC---------CCCEEEEECHHHCC-----
Q ss_conf             5338969999999999998762688777448996287656446999999863---------89659955012000-----
Q batch____       322 TDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTSLGQSIAKAT---------GRKYVRMALGGVRD-----  387 (784)
Q Consensus       322 ~~~~g~~~~k~~i~e~~~~~~~~~~~~~~~~ll~GpPGvGKT~la~~ia~~l---------~~~~~~~~~~~~~~-----  387 (784)
                      +..+|.++-.+++.+++  .....+.++..++++||||+|||++|+.+++.+         ...++.++++....     
T Consensus        19 ~~lvGRe~e~~~l~~~l--~~~~~~~~~~~ilI~G~~G~GKT~la~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (382)
T c2v1uA_          19 DVLPHREAELRRLAEVL--APALRGEKPSNALLYGLTGTGKTAVARLVLRRLEARASSLGVLVKPIYVNARHRETPYRVA   96 (382)
T ss_dssp             SCCTTCHHHHHHHHHTT--GGGTSSCCCCCEEECBCTTSSHHHHHHHHHHHHHHHHHHHTCCEEEEEEETTTSCSHHHHH
T ss_pred             CCCCCHHHHHHHHHHHH--HHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHH
T ss_conf             74749589999999999--9886079987899988889998999999999997414533375159996121321279999


Q ss_pred             ---HHHHCCCCCCCCCCCHHHHHHHHHHCCCCCC--EEEEEEHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEC
Q ss_conf             ---4440367620045213689998863564588--38897125530224775778889884544466201243563001
Q batch____       388 ---EAEIRGHRRTYIGSMPGKLIQKMAKVGVKNP--LFLLDEIDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYD  462 (784)
Q Consensus       388 ---~~~l~g~~~~yvg~~~g~i~~~l~~~~~~~p--VillDEidk~~~~~~~~~~~~lL~~lD~~q~~~~~d~~~~~~~d  462 (784)
                         ...+.+....-.......+............  ++++||+|.+..  .......+....+...              
T Consensus        97 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ild~~d~l~~--~~~~~~~l~~l~~~~~--------------  160 (382)
T c2v1uA_          97 SAIAEAVGVRVPFTGLSVGEVYERLVKRLSRLRGIYIIVLDEIDFLPK--RPGGQDLLYRITRINQ--------------  160 (382)
T ss_dssp             HHHHHHHSCCCCSSCCCHHHHHHHHHHHHTTSCSEEEEEEETTTHHHH--STTHHHHHHHHHHGGG--------------
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHHHCC--CHHHHHHHHHHHHHCC--------------
T ss_conf             999997411245554304678999998754202567302000243048--5358999986443012--------------


Q ss_pred             CCCEEEEEECCCCC----CCHHHHHCC--CEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf             33479996158768----897686103--277648999899999987765799999818654433469899999984014
Q batch____       463 LSDVMFVATSNSMN----IPAPLLDRM--EVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYT  536 (784)
Q Consensus       463 ~s~v~~i~T~n~~~----i~~~ll~R~--~~i~~~~~~~~e~~~I~~~~~~~~~~~~~~~~~~~~~i~~~~l~~i~~~y~  536 (784)
                       +.+.+++|+|..+    ....+..|+  ..+.+.+++.++...++...+..        .......+++++..+++.+.
T Consensus       161 -~~~~~i~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~--------~~~~~~~~~~~~~~~~~~~~  231 (382)
T c2v1uA_         161 -ELVSLVGITNSLGFVENLEPRVKSSLGEVELVFPPYTAPQLRDILETRAEE--------AFNPGVLDPDVVPLCAALAA  231 (382)
T ss_dssp             -CCCEEEEECSCSTTSSSSCHHHHTTTTSEECCBCCCCHHHHHHHHHHHHHH--------HBCTTTBCSSHHHHHHHHHH
T ss_pred             -CCEEEEEEECCHHHHHHCCCHHHHHCCCEEEEECCCCHHHHHHHHHHHHHH--------CCCCCCCCHHHHHHHHHHHH
T ss_conf             -664899962835773210001332068614784489989999999999983--------17878899889999999972


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHC
Q ss_conf             02181257876999999999998403887608970888676617
Q batch____       537 REAGVRGLEREISKLCRKAVKQLLLDKSLKHIEINGDNLHDYLG  580 (784)
Q Consensus       537 ~~~G~R~l~r~i~~i~r~~~~~~~~~~~~~~~~i~~~~i~~~l~  580 (784)
                      ...|.   -+....+++.+..........   .++.+++.+.++
T Consensus       232 ~~~g~---~~~~~~~l~~~~~~a~~~~~~---~i~~~~~~~~~~  269 (382)
T c2v1uA_         232 REHGD---ARRALDLLRVAGEIAERRREE---RVRREHVYSARA  269 (382)
T ss_dssp             SSSCC---HHHHHHHHHHHHHHHHHTTCS---CBCHHHHHHHHH
T ss_pred             CCCCC---HHHHHHHHHHHHHHHHHCCCC---CCCHHHHHHHHH
T ss_conf             15899---889999999999999607998---048999999999