105 c2fnaA_ Probab=98.67   E-value=3.8e-06  Score=60.82  Aligned_columns=160  Identities=19%

Q ss_pred             HHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECHHHCCHHHHC--------
Q ss_conf             653389699999999999987626887774489962876564469999998638965995501200044403--------
Q batch____       321 DTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRDEAEIR--------  392 (784)
Q Consensus       321 ~~~~~g~~~~k~~i~e~~~~~~~~~~~~~~~~ll~GpPGvGKT~la~~ia~~l~~~~~~~~~~~~~~~~~l~--------  392 (784)
                      .++.+|-++-.+++.+..          +++++++||+|+|||++++.+++.++..++.+++..........        
T Consensus        12 ~~~f~GRe~el~~L~~~~----------~~~v~i~G~~G~GKTsLl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   81 (352)
T c2fnaA_          12 RKDFFDREKEIEKLKGLR----------APITLVLGLRRTGKSSIIKIGINELNLPYIYLDLRKFEERNYISYKDFLLEL   81 (352)
T ss_dssp             GGGSCCCHHHHHHHHHTC----------SSEEEEEESTTSSHHHHHHHHHHHHTCCEEEEEGGGGTTCSCCCHHHHHHHH
T ss_pred             HHHCCCHHHHHHHHHHHH----------CCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHH
T ss_conf             112338799999999962----------7819998399888989999999863996899997722653357989999999


Q ss_pred             ---------------------------CCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEHHHHCCCCCCCHHHHHHHHHC
Q ss_conf             ---------------------------67620045213689998863564588388971255302247757788898845
Q batch____       393 ---------------------------GHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLD  445 (784)
Q Consensus       393 ---------------------------g~~~~yvg~~~g~i~~~l~~~~~~~pVillDEidk~~~~~~~~~~~~lL~~lD  445 (784)
                                                 .............+...+.......+++++||.+-+......+....+....+
T Consensus        82 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ide~~~~~~~~~~~~~~~l~~~~~  161 (352)
T c2fnaA_          82 QKEINKLVKRLPSLLKALKNIQGIVIXGNEIKFNRLSFANLLESFEQASKDNVIIVLDEAQELVKLRGVNLLPALAYAYD  161 (352)
T ss_dssp             HHHHHHHHHHCTTHHHHTTTSTTEEECSSSEEECCCCHHHHHHHHHHTCSSCEEEEEETGGGGGGCTTCCCHHHHHHHHH
T ss_pred             HHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECHHHHCCCCHHHHHHHHHHHHH
T ss_conf             98632100012111577653100144443455311234558999984058860899718346225232479999999830


Q ss_pred             CCCCCCCCCCCCCCEECCCCEEEEEEC-----------CCCCCCHHHHHCCCEEECCCCCHHHHHHHHHHHH
Q ss_conf             444662012435630013347999615-----------8768897686103277648999899999987765
Q batch____       446 PEQNVAFSDHYLEVDYDLSDVMFVATS-----------NSMNIPAPLLDRMEVIRLSGYTEDEKLNIAKRHL  506 (784)
Q Consensus       446 ~~q~~~~~d~~~~~~~d~s~v~~i~T~-----------n~~~i~~~ll~R~~~i~~~~~~~~e~~~I~~~~~  506 (784)
                                      ..+++.++.|.           ......+.+..++..+.+.+++.++..+++....
T Consensus       162 ----------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~e~~~ll~~~~  217 (352)
T c2fnaA_         162 ----------------NLKRIKFIXSGSEXGLLYDYLRVEDPESPLFGRAFSTVELKPFSREEAIEFLRRGF  217 (352)
T ss_dssp             ----------------HCTTEEEEEEESSHHHHHHHTTTTCTTSTTTTCCCEEEEECCCCHHHHHHHHHHHH
T ss_pred             ----------------CCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHC
T ss_conf             ----------------28985999942643200013321000122244652043324589899999986311