45 c1in8A_ Probab=99.75   E-value=4.5e-16  Score=130.31  Aligned_columns=207  Identities=20%

Q ss_pred             HHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECHHHCCHHHHCCCCCCCCCC
Q ss_conf             53389699999999999987626887774489962876564469999998638965995501200044403676200452
Q batch____       322 TDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGS  401 (784)
Q Consensus       322 ~~~~g~~~~k~~i~e~~~~~~~~~~~~~~~~ll~GpPGvGKT~la~~ia~~l~~~~~~~~~~~~~~~~~l~g~~~~yvg~  401 (784)
                      +|++|++++++.+..++...+..+...++++ |+||||||||++|++||+.++.+++.++++.......+..        
T Consensus         9 ~d~iG~e~~~~~L~~~i~~~~~~~~~~~~il-l~GppGtGKT~la~~ia~~l~~~~~~i~~~~~~~~~~~~~--------   79 (298)
T c1in8A_           9 DEFIGQENVKKKLSLALEAAKMRGEVLDHVL-LAGPPGLGKTTLAHIIASELQTNIHVTSGPVLVKQGDMAA--------   79 (298)
T ss_dssp             GGCCSCHHHHHHHHHHHHHHHHHTCCCCCEE-EESSTTSSHHHHHHHHHHHHTCCEEEEETTTCCSHHHHHH--------
T ss_pred             HHHCCHHHHHHHHHHHHHHHHHCCCCCCCEE-EECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHH--------
T ss_conf             7812709999999999999863388888579-9869889888999999997099799994155332012456--------


Q ss_pred             CHHHHHHHHHHCCCCCCEEEEEEHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEECCCCEEEEEECCCCC--CCH
Q ss_conf             136899988635645883889712553022477577888988454446620124356300133479996158768--897
Q batch____       402 MPGKLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSNSMN--IPA  479 (784)
Q Consensus       402 ~~g~i~~~l~~~~~~~pVillDEidk~~~~~~~~~~~~lL~~lD~~q~~~~~d~~~~~~~d~s~v~~i~T~n~~~--i~~  479 (784)
                              .......+.++|+||+|.+    ..+..+.++..++            +...+....++++.++..+  .+.
T Consensus        80 --------~~~~~~~~~il~~dei~~l----~~~~~~~l~~~l~------------~~~~~~~~~~~~~~~~~~~~~~~~  135 (298)
T c1in8A_          80 --------ILTSLERGDVLFIDEIHRL----NKAVEELLYSAIE------------DFQIDIQPFTLVGATVRSGLLSSP  135 (298)
T ss_dssp             --------HHHTCCTTCEEEEETGGGC----CHHHHHHHHHHHH------------HSCCCCCCCEEEEEESCGGGSCHH
T ss_pred             --------HHHHHCCCCEEEEEEHHHC----CHHHHHHHHHHHH------------CCCCCCCEEEECCCCCCHHHCCCH
T ss_conf             --------6885137998999423676----9899999999970------------553344406652654585631464


Q ss_pred             HHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             68610327764899989999998776579999981865443346989999998401402181257876999999999998
Q batch____       480 PLLDRMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRGLEREISKLCRKAVKQL  559 (784)
Q Consensus       480 ~ll~R~~~i~~~~~~~~e~~~I~~~~~~~~~~~~~~~~~~~~~i~~~~l~~i~~~y~~~~G~R~l~r~i~~i~r~~~~~~  559 (784)
                      ....++..+.+..|+.+++..|.+.+          .....+.+++++++.+++.+  ....|.+.+.+..++..+..+.
T Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~i~~~~--~g~~R~~~~ll~~~~~~~~~~~  203 (298)
T c1in8A_         136 LRSRFGIILELDFYTVKELKEIIKRA----------ASLMDVEIEDAAAEMIAKRS--RGTPRIAIRLTKRVRDMLTVVK  203 (298)
T ss_dssp             HHTTCSEEEECCCCCHHHHHHHHHHH----------HHHTTCCBCHHHHHHHHHTS--TTCHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHCCCCCCCHHHHHHHHHHH----------HHHCCCCCCHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHCC
T ss_conf             33234431136789899999999999----------99829855889999999983--9998999999999999998529


Q ss_pred             HCCCCCCEEEEEHHHHHHHHC
Q ss_conf             403887608970888676617
Q batch____       560 LLDKSLKHIEINGDNLHDYLG  580 (784)
Q Consensus       560 ~~~~~~~~~~i~~~~i~~~l~  580 (784)
                      ..       .++.+.+.+.++
T Consensus       204 ~~-------~i~~~~i~~~~~  217 (298)
T c1in8A_         204 AD-------RINTDIVLKTME  217 (298)
T ss_dssp             CS-------SBCHHHHHHHHH
T ss_pred             CC-------CCCHHHHHHHHH
T ss_conf             88-------769899999997