Phyre 2 alignment of P66817 with c2r0qF_

Return to main results | Retrieve Phyre Job Id

Job Description | P66817
Confidence | 27.70% | Date | Thu Jan 5 12:10:20 GMT 2012
Rank | 360 | Aligned Residues | 42
% Identity | 12% | Template | c2r0qF_
PDB info | PDB header:recombination/dna | Chain: F: PDB Molecule:putative transposon tn552 dna-invertase bin3; | PDBTitle: crystal structure of a serine recombinase- dna regulatory2 complex
Resolution | 3.20 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 101 | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . |  |  |  | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | K | Q | V | R | A | L | G | H | A | G | D | V | L | L | A | I | S | T | R | G | N | S | R | D | I | V | K | . | . | . | A | V | E | A | A | V | T | R | D | M | T | I | V | A | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Q | K | A | L | N | F | V | R | M | G | D | R | F | I | V | E | S | I | D | R | L | G | R | N | Y | N | E | V | I | H | T | V | N | Y | L | K | D | K | E | V | Q | L | M | I | T
Template Known Secondary structure |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  | S | S | G | G | G | G |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 47 | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions