BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (510 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P76361 Inner membrane protein yeeR n=25 Tax=Enterobacte... 1055 0.0 UniRef50_D2RK21 Putative uncharacterized protein n=1 Tax=Acidami... 126 2e-27 UniRef50_C7G879 Putative uncharacterized protein n=1 Tax=Rosebur... 120 1e-25 UniRef50_C9LXG5 Inner membrane protein YeeR n=1 Tax=Selenomonas ... 113 1e-23 UniRef50_Q7UUU7 Putative uncharacterized protein n=1 Tax=Rhodopi... 100 9e-20 UniRef50_A4ECC1 Putative uncharacterized protein n=1 Tax=Collins... 100 1e-19 UniRef50_B9WSS5 Putative uncharacterized protein n=1 Tax=Strepto... 100 2e-19 UniRef50_A7NRD7 Putative uncharacterized protein n=1 Tax=Roseifl... 96 3e-18 UniRef50_A4BP35 Putative uncharacterized protein n=1 Tax=Nitroco... 86 2e-15 UniRef50_C0R115 Putative uncharacterized protein n=1 Tax=Brachys... 81 1e-13 UniRef50_UPI00006CBFCE TPR Domain containing protein n=4 Tax=Tet... 76 3e-12 >UniRef50_P76361 Inner membrane protein yeeR n=25 Tax=Enterobacteriaceae RepID=YEER_ECOLI Length = 510 Score = 1055 bits (2728), Expect = 0.0, Method: Compositional matrix adjust. Identities = 510/510 (100%), Positives = 510/510 (100%) Query: 1 MLQIVGALILLIAGFAILRLLFRALISTASALAGLILLCLFGPALLAGYITERITRLFHI 60 MLQIVGALILLIAGFAILRLLFRALISTASALAGLILLCLFGPALLAGYITERITRLFHI Sbjct: 1 MLQIVGALILLIAGFAILRLLFRALISTASALAGLILLCLFGPALLAGYITERITRLFHI 60 Query: 61 RWLAGVFLTIAGMIISFMWGLDGKHIALEAHTFDSVKFILTTALAGGLLAVPLQIKNIQQ 120 RWLAGVFLTIAGMIISFMWGLDGKHIALEAHTFDSVKFILTTALAGGLLAVPLQIKNIQQ Sbjct: 61 RWLAGVFLTIAGMIISFMWGLDGKHIALEAHTFDSVKFILTTALAGGLLAVPLQIKNIQQ 120 Query: 121 NGITPEDISKEINGYYCCFYTAFFLMACSACAPLIALQYDISPSLMWWGGLLYWLAALVT 180 NGITPEDISKEINGYYCCFYTAFFLMACSACAPLIALQYDISPSLMWWGGLLYWLAALVT Sbjct: 121 NGITPEDISKEINGYYCCFYTAFFLMACSACAPLIALQYDISPSLMWWGGLLYWLAALVT 180 Query: 181 LLWAASQIQALKKLTCAISQTLEEQPVLNSKSWLTSLQNDYSLPDSLTERIWLTLISQRI 240 LLWAASQIQALKKLTCAISQTLEEQPVLNSKSWLTSLQNDYSLPDSLTERIWLTLISQRI Sbjct: 181 LLWAASQIQALKKLTCAISQTLEEQPVLNSKSWLTSLQNDYSLPDSLTERIWLTLISQRI 240 Query: 241 SRGELREFELADGNWLLNNAWYERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEAND 300 SRGELREFELADGNWLLNNAWYERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEAND Sbjct: 241 SRGELREFELADGNWLLNNAWYERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEAND 300 Query: 301 DFLDRCLDGGDWYPFSEGRRFVSFHHVDELRICASCGLTEVHHAPENHKPDPEWYCSSLC 360 DFLDRCLDGGDWYPFSEGRRFVSFHHVDELRICASCGLTEVHHAPENHKPDPEWYCSSLC Sbjct: 301 DFLDRCLDGGDWYPFSEGRRFVSFHHVDELRICASCGLTEVHHAPENHKPDPEWYCSSLC 360 Query: 361 RETETLCQEIYERPYNSFISDATANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHI 420 RETETLCQEIYERPYNSFISDATANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHI Sbjct: 361 RETETLCQEIYERPYNSFISDATANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHI 420 Query: 421 VDRVRLKNARILGDNNARNGADRLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNNG 480 VDRVRLKNARILGDNNARNGADRLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNNG Sbjct: 421 VDRVRLKNARILGDNNARNGADRLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNNG 480 Query: 481 PMQLEVPRDQYAGAVETMRNKIREGKVEER 510 PMQLEVPRDQYAGAVETMRNKIREGKVEER Sbjct: 481 PMQLEVPRDQYAGAVETMRNKIREGKVEER 510 >UniRef50_D2RK21 Putative uncharacterized protein n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RK21_ACIFE Length = 622 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 65/116 (56%), Positives = 83/116 (71%), Gaps = 2/116 (1%) Query: 394 ETWSTNEKMFA-SGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGADRLVSGTEIQT 452 ++ + NE+M + QG GFAAE+ N ++D + KNA+I+G++NA+NGADRLV G IQ+ Sbjct: 91 DSAAHNEQMLRFNARQGQGFAAEQANDLIDSMGGKNAQIVGNDNAKNGADRLVDGMLIQS 150 Query: 453 KYCSTAARSVGAAFDGQNGQYRYMGNNG-PMQLEVPRDQYAGAVETMRNKIREGKV 507 KYC TA SV AAF+ Q YRY+ NG PMQLEVP DQY AV+ MR KI EGKV Sbjct: 151 KYCQTAQASVNAAFNPQTKYYRYIDRNGTPMQLEVPSDQYNEAVQLMRRKIAEGKV 206 >UniRef50_C7G879 Putative uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G879_9FIRM Length = 638 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 55/102 (53%), Positives = 74/102 (72%), Gaps = 1/102 (0%) Query: 406 GGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGADRLVSGTEIQTKYCSTAARSVGAA 465 G QGHGFAAER N++ D + +A+I+GD+N +NGADR+V G IQ+KYC T + V Sbjct: 188 GRQGHGFAAERANNLYDNLTGHDAKIVGDDNVKNGADRMVDGIFIQSKYCQTGSACVNEC 247 Query: 466 FDGQNGQYRYMGNNGPMQLEVPRDQYAGAVETMRNKIREGKV 507 FD Q G +RY+ + PMQ+EVP D+Y AVE M++KIR+GKV Sbjct: 248 FDEQ-GNFRYLKDGKPMQIEVPSDKYDAAVEAMQDKIRKGKV 288 >UniRef50_C9LXG5 Inner membrane protein YeeR n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LXG5_9FIRM Length = 586 Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 56/101 (55%), Positives = 74/101 (73%), Gaps = 3/101 (2%) Query: 408 QGHGFAAERGNHIVDRVRLKNARILGDNNARNGADRLVSGTEIQTKYCSTAARSVGAAFD 467 QGHG+AAE+ N ++D++ K+A ILGD+NA+NG DR+V G IQTKYC+ A +V AAF Sbjct: 52 QGHGYAAEQVNDLIDKLSGKDAWILGDDNAKNGPDRMVDGQLIQTKYCANAQATVDAAF- 110 Query: 468 GQNGQYRYMGNNG-PMQLEVPRDQYAGAVETMRNKIREGKV 507 +NG+YRY+ G PMQLEVP DQY ++ M KI EG+V Sbjct: 111 -RNGKYRYLDAQGKPMQLEVPSDQYQASIRCMEEKIAEGQV 150 >UniRef50_Q7UUU7 Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica RepID=Q7UUU7_RHOBA Length = 488 Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 51/99 (51%), Positives = 63/99 (63%), Gaps = 4/99 (4%) Query: 409 GHGFAAERGNHIVDRVRLKNARILGDNNARNGADRLVSGTEIQTKYCSTAARSVGAAFDG 468 GHGF AE NH+ D R + A I+G NN NGADR+V G IQ+KY TAA++V +AF Sbjct: 38 GHGFTAEDANHLADVFRGRRAEIIGINNEANGADRIVDGLRIQSKYYQTAAKTVASAFAS 97 Query: 469 QNGQYRYMGNNGPMQLEVPRDQYAGAVETMRNKIREGKV 507 ++G YRY LEVP+DQY VE MR +I GKV Sbjct: 98 ESGLYRY----AQQVLEVPKDQYDACVELMRKRIAAGKV 132 >UniRef50_A4ECC1 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECC1_9ACTN Length = 730 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 52/100 (52%), Positives = 64/100 (64%), Gaps = 1/100 (1%) Query: 409 GHGFAAERGNHIVDRVRLKNARILGDNNARNGADRLVSGTEIQTKYCSTAARSVGAAFDG 468 GHG AE N I+DR++ A ILG +NA+NGADR V G IQTKY TA S+ A FD Sbjct: 265 GHGELAEEANSIIDRLQGHQAEILGRDNAKNGADRSVDGVLIQTKYYKTARGSLEACFDP 324 Query: 469 QNGQYRYMGNN-GPMQLEVPRDQYAGAVETMRNKIREGKV 507 + QYRY+ + PMQLEVP+DQY + KI +GKV Sbjct: 325 SSHQYRYLTEDRTPMQLEVPKDQYQQVLRGFEKKISQGKV 364 >UniRef50_B9WSS5 Putative uncharacterized protein n=1 Tax=Streptococcus suis 89/1591 RepID=B9WSS5_STRSU Length = 349 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 48/106 (45%), Positives = 72/106 (67%), Gaps = 7/106 (6%) Query: 404 ASGGQGHGFAAERGNHIVDRVRLKNARI--LGDNNARNGADRLVSGTEIQTKYCSTAARS 461 A QGHG AAE N+++D+++ ++ +G +N +NGADR+V +IQTKY + A+ + Sbjct: 244 AKAPQGHGHAAEYANNVIDKIKYPFQKVEQVGRDNVKNGADRIVGNQKIQTKYYAKASGT 303 Query: 462 VGAAFDGQN-GQYRYMGNNGPMQLEVPRDQYAGAVETMRNKIREGK 506 + AAFD N G+YRY G MQLEVP+DQY +++ M+ KI+ GK Sbjct: 304 INAAFDKANGGEYRYKG----MQLEVPKDQYNESIQLMKKKIKAGK 345 >UniRef50_A7NRD7 Putative uncharacterized protein n=1 Tax=Roseiflexus castenholzii DSM 13941 RepID=A7NRD7_ROSCS Length = 504 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 52/99 (52%), Positives = 60/99 (60%), Gaps = 4/99 (4%) Query: 409 GHGFAAERGNHIVDRVRLKNARILGDNNARNGADRLVSGTEIQTKYCSTAARSVGAAFDG 468 GHGFAAE N D +RL+N I G+ N NG DR+V GT IQTKY T+ ++ AAFD Sbjct: 40 GHGFAAEDANAYGDALRLRNVEITGNANKINGPDRIVDGTPIQTKYFQTSDATINAAFDH 99 Query: 469 QNGQYRYMGNNGPMQLEVPRDQYAGAVETMRNKIREGKV 507 G YRY G LEVP DQY VE + KI EGKV Sbjct: 100 TTGLYRYQG----QVLEVPADQYDECVELFQRKIAEGKV 134 >UniRef50_A4BP35 Putative uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BP35_9GAMM Length = 494 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 44/99 (44%), Positives = 60/99 (60%), Gaps = 4/99 (4%) Query: 409 GHGFAAERGNHIVDRVRLKNARILGDNNARNGADRLVSGTEIQTKYCSTAARSVGAAFDG 468 GHGFAAE + + ++ ++A+I+G N NGAD L +G ++Q KYC + ++ AAF Sbjct: 43 GHGFAAEEASALSYKLHGQDAKIIGGTNQANGADLLANGVQLQLKYCQSPQATINAAFAP 102 Query: 469 QNGQYRYMGNNGPMQLEVPRDQYAGAVETMRNKIREGKV 507 +G YRY G LEVP DQY +E MR KI GKV Sbjct: 103 DSGNYRY----GDQVLEVPADQYESCIELMRQKISGGKV 137 >UniRef50_C0R115 Putative uncharacterized protein n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0R115_BRAHW Length = 647 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 65/271 (23%), Positives = 123/271 (45%), Gaps = 18/271 (6%) Query: 242 RGELREFELADGNWLLNNAWYERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDD 301 +G++++ L D ++ N ++ + NE +K + + + + L LS E D Sbjct: 72 KGKIKKIYLFDKDYYFNINFFNKCSDKANEIIKLDTRVDKEFAVSSLKETLPLSDECLYD 131 Query: 302 FLDRCLDGGDWYPFSEGRRFVSFHHVDELRICASCGLTEVHHAPENHKPDPEWYCSSLCR 361 F D + F +G FV + D++ ICASCG + + EN+ P+ EW+CS +C Sbjct: 132 FFIVKNDDINLLEFDDGEFFVHNINNDKIVICASCGKAGLISSLENYNPNEEWFCSLICV 191 Query: 362 ETETLCQEIYERPYNSFISDATANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIV 421 TE C +I + F ++ T +++ N+ +F + E ++ Sbjct: 192 STEDKCYKIASQK--DFPNNYTEPDIVV-----DSDGNQLIFNENYNYNKNKTE---FLI 241 Query: 422 DRVRLKNARILGDNNARNGADRLVSGTEIQTKYCSTAARSVGAAF--DGQNG--QYRYMG 477 +++ N +L ++N ++ V I+ K ++ + F D + G QY+Y Sbjct: 242 NKIDPNNDAVLENDNIFLELEKYVP---IKNKIYKNVEETINSMFIIDEEIGKEQYKYYD 298 Query: 478 NNGP-MQLEVPRDQYAGAVETMRNKIREGKV 507 G + EVP+D Y ++E M+ KI G + Sbjct: 299 EEGKALSFEVPKDFYEASIEKMKEKILNGSI 329 >UniRef50_UPI00006CBFCE TPR Domain containing protein n=4 Tax=Tetrahymena thermophila RepID=UPI00006CBFCE Length = 790 Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 41/115 (35%), Positives = 68/115 (59%), Gaps = 13/115 (11%) Query: 399 NEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGADRLVSGTEIQTKYCSTA 458 N+ + + QGHG+AAE+ N+++D ++ A +L + +NG DR+V+G IQTKYC A Sbjct: 28 NDTLKFNARQGHGYAAEQANNLIDELKGDKAVVLNEY-IKNGPDRIVNGNLIQTKYCKNA 86 Query: 459 ARSVGAAFDGQNGQYRYMGNNGPMQLEVPRDQYAGAVETMRNK------IREGKV 507 + F ++G++RY G Q+EVP +QY ++ ++K IR+G V Sbjct: 87 YSTFKNCF--KDGEFRYNG----QQIEVPPEQYDEVIQLFQDKGIKDVTIRKGHV 135 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P76361 Inner membrane protein yeeR n=25 Tax=Enterobacte... 954 0.0 UniRef50_C0R115 Putative uncharacterized protein n=1 Tax=Brachys... 343 1e-92 UniRef50_D2RK21 Putative uncharacterized protein n=1 Tax=Acidami... 174 5e-42 UniRef50_C9LXG5 Inner membrane protein YeeR n=1 Tax=Selenomonas ... 162 3e-38 UniRef50_C7G879 Putative uncharacterized protein n=1 Tax=Rosebur... 162 3e-38 UniRef50_A4ECC1 Putative uncharacterized protein n=1 Tax=Collins... 151 6e-35 UniRef50_A7NRD7 Putative uncharacterized protein n=1 Tax=Roseifl... 143 2e-32 UniRef50_Q7UUU7 Putative uncharacterized protein n=1 Tax=Rhodopi... 142 2e-32 UniRef50_A4BP35 Putative uncharacterized protein n=1 Tax=Nitroco... 141 5e-32 UniRef50_B9WSS5 Putative uncharacterized protein n=1 Tax=Strepto... 138 4e-31 UniRef50_UPI00006CBFCE TPR Domain containing protein n=4 Tax=Tet... 134 6e-30 Sequences not found previously or not previously below threshold: UniRef50_C5RQT6 Putative uncharacterized protein n=1 Tax=Clostri... 53 3e-05 UniRef50_B0WCY7 Putative uncharacterized protein n=1 Tax=Culex q... 42 0.067 >UniRef50_P76361 Inner membrane protein yeeR n=25 Tax=Enterobacteriaceae RepID=YEER_ECOLI Length = 510 Score = 954 bits (2465), Expect = 0.0, Method: Composition-based stats. Identities = 510/510 (100%), Positives = 510/510 (100%) Query: 1 MLQIVGALILLIAGFAILRLLFRALISTASALAGLILLCLFGPALLAGYITERITRLFHI 60 MLQIVGALILLIAGFAILRLLFRALISTASALAGLILLCLFGPALLAGYITERITRLFHI Sbjct: 1 MLQIVGALILLIAGFAILRLLFRALISTASALAGLILLCLFGPALLAGYITERITRLFHI 60 Query: 61 RWLAGVFLTIAGMIISFMWGLDGKHIALEAHTFDSVKFILTTALAGGLLAVPLQIKNIQQ 120 RWLAGVFLTIAGMIISFMWGLDGKHIALEAHTFDSVKFILTTALAGGLLAVPLQIKNIQQ Sbjct: 61 RWLAGVFLTIAGMIISFMWGLDGKHIALEAHTFDSVKFILTTALAGGLLAVPLQIKNIQQ 120 Query: 121 NGITPEDISKEINGYYCCFYTAFFLMACSACAPLIALQYDISPSLMWWGGLLYWLAALVT 180 NGITPEDISKEINGYYCCFYTAFFLMACSACAPLIALQYDISPSLMWWGGLLYWLAALVT Sbjct: 121 NGITPEDISKEINGYYCCFYTAFFLMACSACAPLIALQYDISPSLMWWGGLLYWLAALVT 180 Query: 181 LLWAASQIQALKKLTCAISQTLEEQPVLNSKSWLTSLQNDYSLPDSLTERIWLTLISQRI 240 LLWAASQIQALKKLTCAISQTLEEQPVLNSKSWLTSLQNDYSLPDSLTERIWLTLISQRI Sbjct: 181 LLWAASQIQALKKLTCAISQTLEEQPVLNSKSWLTSLQNDYSLPDSLTERIWLTLISQRI 240 Query: 241 SRGELREFELADGNWLLNNAWYERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEAND 300 SRGELREFELADGNWLLNNAWYERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEAND Sbjct: 241 SRGELREFELADGNWLLNNAWYERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEAND 300 Query: 301 DFLDRCLDGGDWYPFSEGRRFVSFHHVDELRICASCGLTEVHHAPENHKPDPEWYCSSLC 360 DFLDRCLDGGDWYPFSEGRRFVSFHHVDELRICASCGLTEVHHAPENHKPDPEWYCSSLC Sbjct: 301 DFLDRCLDGGDWYPFSEGRRFVSFHHVDELRICASCGLTEVHHAPENHKPDPEWYCSSLC 360 Query: 361 RETETLCQEIYERPYNSFISDATANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHI 420 RETETLCQEIYERPYNSFISDATANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHI Sbjct: 361 RETETLCQEIYERPYNSFISDATANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHI 420 Query: 421 VDRVRLKNARILGDNNARNGADRLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNNG 480 VDRVRLKNARILGDNNARNGADRLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNNG Sbjct: 421 VDRVRLKNARILGDNNARNGADRLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNNG 480 Query: 481 PMQLEVPRDQYAGAVETMRNKIREGKVEER 510 PMQLEVPRDQYAGAVETMRNKIREGKVEER Sbjct: 481 PMQLEVPRDQYAGAVETMRNKIREGKVEER 510 >UniRef50_C0R115 Putative uncharacterized protein n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0R115_BRAHW Length = 647 Score = 343 bits (880), Expect = 1e-92, Method: Composition-based stats. Identities = 65/271 (23%), Positives = 123/271 (45%), Gaps = 18/271 (6%) Query: 242 RGELREFELADGNWLLNNAWYERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDD 301 +G++++ L D ++ N ++ + NE +K + + + + L LS E D Sbjct: 72 KGKIKKIYLFDKDYYFNINFFNKCSDKANEIIKLDTRVDKEFAVSSLKETLPLSDECLYD 131 Query: 302 FLDRCLDGGDWYPFSEGRRFVSFHHVDELRICASCGLTEVHHAPENHKPDPEWYCSSLCR 361 F D + F +G FV + D++ ICASCG + + EN+ P+ EW+CS +C Sbjct: 132 FFIVKNDDINLLEFDDGEFFVHNINNDKIVICASCGKAGLISSLENYNPNEEWFCSLICV 191 Query: 362 ETETLCQEIYERPYNSFISDATANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIV 421 TE C +I + F ++ T +++ N+ +F + E ++ Sbjct: 192 STEDKCYKIASQK--DFPNNYTEPDIVV-----DSDGNQLIFNENYNYNKNKTE---FLI 241 Query: 422 DRVRLKNARILGDNNARNGADRLVSGTEIQTKYCSTAARSVGAAF--DGQNG--QYRYMG 477 +++ N +L ++N ++ V I+ K ++ + F D + G QY+Y Sbjct: 242 NKIDPNNDAVLENDNIFLELEKYVP---IKNKIYKNVEETINSMFIIDEEIGKEQYKYYD 298 Query: 478 NNGP-MQLEVPRDQYAGAVETMRNKIREGKV 507 G + EVP+D Y ++E M+ KI G + Sbjct: 299 EEGKALSFEVPKDFYEASIEKMKEKILNGSI 329 >UniRef50_D2RK21 Putative uncharacterized protein n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RK21_ACIFE Length = 622 Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats. Identities = 78/202 (38%), Positives = 103/202 (50%), Gaps = 15/202 (7%) Query: 318 GRRFV--SFHHVDELRICASCGLTEVHHAPENHKPDPEWYCSSLCRETETLCQEIYERPY 375 G F+ H+ + I + G + PE H C L E Sbjct: 8 GPFFLLSQNLHIAYVIISVNAGRSGNGFVPE-HSSTYMLICGGL--HMEKKIYHQNSGLA 64 Query: 376 NSFISDATANGLI--------LMKLPETWSTNEKMF-ASGGQGHGFAAERGNHIVDRVRL 426 +A + L ++ + NE+M + QG GFAAE+ N ++D + Sbjct: 65 EKLRKNANEQEKVDTGKIGGSLYGSMDSAAHNEQMLRFNARQGQGFAAEQANDLIDSMGG 124 Query: 427 KNARILGDNNARNGADRLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNNG-PMQLE 485 KNA+I+G++NA+NGADRLV G IQ+KYC TA SV AAF+ Q YRY+ NG PMQLE Sbjct: 125 KNAQIVGNDNAKNGADRLVDGMLIQSKYCQTAQASVNAAFNPQTKYYRYIDRNGTPMQLE 184 Query: 486 VPRDQYAGAVETMRNKIREGKV 507 VP DQY AV+ MR KI EGKV Sbjct: 185 VPSDQYNEAVQLMRRKIAEGKV 206 >UniRef50_C9LXG5 Inner membrane protein YeeR n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LXG5_9FIRM Length = 586 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 57/116 (49%), Positives = 81/116 (69%), Gaps = 4/116 (3%) Query: 394 ETWSTNEKM-FASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGADRLVSGTEIQT 452 E+ + +++ + QGHG+AAE+ N ++D++ K+A ILGD+NA+NG DR+V G IQT Sbjct: 37 ESAAHGDRLGRFNARQGHGYAAEQVNDLIDKLSGKDAWILGDDNAKNGPDRMVDGQLIQT 96 Query: 453 KYCSTAARSVGAAFDGQNGQYRYMGNNG-PMQLEVPRDQYAGAVETMRNKIREGKV 507 KYC+ A +V AAF +NG+YRY+ G PMQLEVP DQY ++ M KI EG+V Sbjct: 97 KYCANAQATVDAAF--RNGKYRYLDAQGKPMQLEVPSDQYQASIRCMEEKIAEGQV 150 >UniRef50_C7G879 Putative uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G879_9FIRM Length = 638 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 61/151 (40%), Positives = 90/151 (59%), Gaps = 1/151 (0%) Query: 357 SSLCRETETLCQEIYERPYNSFISDATANGLILMKLPETWSTNEKMFASGGQGHGFAAER 416 + + + E +++ + S A A G+ + E+ G QGHGFAAER Sbjct: 139 ALIRQPAEDNIEKLNVQTDKSENYGAMAGGISSAAYGQINKLYEEEKFHGRQGHGFAAER 198 Query: 417 GNHIVDRVRLKNARILGDNNARNGADRLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYM 476 N++ D + +A+I+GD+N +NGADR+V G IQ+KYC T + V FD Q G +RY+ Sbjct: 199 ANNLYDNLTGHDAKIVGDDNVKNGADRMVDGIFIQSKYCQTGSACVNECFDEQ-GNFRYL 257 Query: 477 GNNGPMQLEVPRDQYAGAVETMRNKIREGKV 507 + PMQ+EVP D+Y AVE M++KIR+GKV Sbjct: 258 KDGKPMQIEVPSDKYDAAVEAMQDKIRKGKV 288 >UniRef50_A4ECC1 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECC1_9ACTN Length = 730 Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats. Identities = 52/104 (50%), Positives = 65/104 (62%), Gaps = 1/104 (0%) Query: 405 SGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGADRLVSGTEIQTKYCSTAARSVGA 464 + GHG AE N I+DR++ A ILG +NA+NGADR V G IQTKY TA S+ A Sbjct: 261 NNPAGHGELAEEANSIIDRLQGHQAEILGRDNAKNGADRSVDGVLIQTKYYKTARGSLEA 320 Query: 465 AFDGQNGQYRYMGNN-GPMQLEVPRDQYAGAVETMRNKIREGKV 507 FD + QYRY+ + PMQLEVP+DQY + KI +GKV Sbjct: 321 CFDPSSHQYRYLTEDRTPMQLEVPKDQYQQVLRGFEKKISQGKV 364 >UniRef50_A7NRD7 Putative uncharacterized protein n=1 Tax=Roseiflexus castenholzii DSM 13941 RepID=A7NRD7_ROSCS Length = 504 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 52/108 (48%), Positives = 61/108 (56%), Gaps = 4/108 (3%) Query: 400 EKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGADRLVSGTEIQTKYCSTAA 459 + GHGFAAE N D +RL+N I G+ N NG DR+V GT IQTKY T+ Sbjct: 31 QISKYHTKGGHGFAAEDANAYGDALRLRNVEITGNANKINGPDRIVDGTPIQTKYFQTSD 90 Query: 460 RSVGAAFDGQNGQYRYMGNNGPMQLEVPRDQYAGAVETMRNKIREGKV 507 ++ AAFD G YRY G LEVP DQY VE + KI EGKV Sbjct: 91 ATINAAFDHTTGLYRYQG----QVLEVPADQYDECVELFQRKIAEGKV 134 >UniRef50_Q7UUU7 Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica RepID=Q7UUU7_RHOBA Length = 488 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 55/136 (40%), Positives = 72/136 (52%), Gaps = 5/136 (3%) Query: 372 ERPYNSFISDATANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARI 431 +P N A L + + ++ GHGF AE NH+ D R + A I Sbjct: 2 TQPSNDKRKPAVER-LASPAIAHSLERSQIAKYHTKGGHGFTAEDANHLADVFRGRRAEI 60 Query: 432 LGDNNARNGADRLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNNGPMQLEVPRDQY 491 +G NN NGADR+V G IQ+KY TAA++V +AF ++G YRY LEVP+DQY Sbjct: 61 IGINNEANGADRIVDGLRIQSKYYQTAAKTVASAFASESGLYRY----AQQVLEVPKDQY 116 Query: 492 AGAVETMRNKIREGKV 507 VE MR +I GKV Sbjct: 117 DACVELMRKRIAAGKV 132 >UniRef50_A4BP35 Putative uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BP35_9GAMM Length = 494 Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats. Identities = 48/138 (34%), Positives = 69/138 (50%), Gaps = 5/138 (3%) Query: 370 IYERPYNSFISDATANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNA 429 I ++ + ANG + + GHGFAAE + + ++ ++A Sbjct: 5 IMANHKKNYPFN-IANGYSAAATASSLEKTQIGKFHTKGGHGFAAEEASALSYKLHGQDA 63 Query: 430 RILGDNNARNGADRLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNNGPMQLEVPRD 489 +I+G N NGAD L +G ++Q KYC + ++ AAF +G YRY G LEVP D Sbjct: 64 KIIGGTNQANGADLLANGVQLQLKYCQSPQATINAAFAPDSGNYRY----GDQVLEVPAD 119 Query: 490 QYAGAVETMRNKIREGKV 507 QY +E MR KI GKV Sbjct: 120 QYESCIELMRQKISGGKV 137 >UniRef50_B9WSS5 Putative uncharacterized protein n=1 Tax=Streptococcus suis 89/1591 RepID=B9WSS5_STRSU Length = 349 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 48/106 (45%), Positives = 72/106 (67%), Gaps = 7/106 (6%) Query: 404 ASGGQGHGFAAERGNHIVDRVRLKNARI--LGDNNARNGADRLVSGTEIQTKYCSTAARS 461 A QGHG AAE N+++D+++ ++ +G +N +NGADR+V +IQTKY + A+ + Sbjct: 244 AKAPQGHGHAAEYANNVIDKIKYPFQKVEQVGRDNVKNGADRIVGNQKIQTKYYAKASGT 303 Query: 462 VGAAFDGQN-GQYRYMGNNGPMQLEVPRDQYAGAVETMRNKIREGK 506 + AAFD N G+YRY G MQLEVP+DQY +++ M+ KI+ GK Sbjct: 304 INAAFDKANGGEYRYKG----MQLEVPKDQYNESIQLMKKKIKAGK 345 >UniRef50_UPI00006CBFCE TPR Domain containing protein n=4 Tax=Tetrahymena thermophila RepID=UPI00006CBFCE Length = 790 Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats. Identities = 41/115 (35%), Positives = 68/115 (59%), Gaps = 13/115 (11%) Query: 399 NEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGADRLVSGTEIQTKYCSTA 458 N+ + + QGHG+AAE+ N+++D ++ A +L + +NG DR+V+G IQTKYC A Sbjct: 28 NDTLKFNARQGHGYAAEQANNLIDELKGDKAVVLNEY-IKNGPDRIVNGNLIQTKYCKNA 86 Query: 459 ARSVGAAFDGQNGQYRYMGNNGPMQLEVPRDQYAGAVETMRNK------IREGKV 507 + F ++G++RY G Q+EVP +QY ++ ++K IR+G V Sbjct: 87 YSTFKNCF--KDGEFRYNG----QQIEVPPEQYDEVIQLFQDKGIKDVTIRKGHV 135 >UniRef50_C5RQT6 Putative uncharacterized protein n=1 Tax=Clostridium cellulovorans 743B RepID=C5RQT6_CLOCL Length = 590 Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Query: 429 ARILGDNNARNGADRLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNNGP---MQLE 485 ++ NN + D +IQT YC +A + + F+ +N + + +++E Sbjct: 163 DTVIKINNDVSSIDSFKGDVKIQTYYCESAEKFINQFFNEEN-DFLLCDSKQKVKNIRIE 221 Query: 486 VPRDQYAGAVETMRNKIREGKV 507 VP+D Y V+ M KI+EG + Sbjct: 222 VPKDIYIEVVKLMSEKIKEGMI 243 >UniRef50_B0WCY7 Putative uncharacterized protein n=1 Tax=Culex quinquefasciatus RepID=B0WCY7_CULQU Length = 526 Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 37/107 (34%), Gaps = 4/107 (3%) Query: 327 VDELRICASCGLTEVHHAPENHKPDPEWYCSSLCRETETLCQEIYERPYNSFISDATANG 386 V+E+ C+SCG+ H +N D EWYC CR E T Sbjct: 22 VEEIITCSSCGMKYHSHCADNTAADTEWYCPEGCRNNLDDSAEQAREQ----PDAVTDTD 77 Query: 387 LILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILG 433 ++ E + + + AER I +R K ++ Sbjct: 78 CPVVGQAEEFDAERWIREKQEEIEMELAERQAQIDRELREKEEKMAE 124 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P76361 Inner membrane protein yeeR n=25 Tax=Enterobacte... 918 0.0 UniRef50_C0R115 Putative uncharacterized protein n=1 Tax=Brachys... 322 3e-86 UniRef50_D2RK21 Putative uncharacterized protein n=1 Tax=Acidami... 235 4e-60 UniRef50_C7G879 Putative uncharacterized protein n=1 Tax=Rosebur... 203 1e-50 UniRef50_Q7UUU7 Putative uncharacterized protein n=1 Tax=Rhodopi... 172 3e-41 UniRef50_A4BP35 Putative uncharacterized protein n=1 Tax=Nitroco... 171 7e-41 UniRef50_C9LXG5 Inner membrane protein YeeR n=1 Tax=Selenomonas ... 162 2e-38 UniRef50_A7NRD7 Putative uncharacterized protein n=1 Tax=Roseifl... 158 6e-37 UniRef50_A4ECC1 Putative uncharacterized protein n=1 Tax=Collins... 149 2e-34 UniRef50_B9WSS5 Putative uncharacterized protein n=1 Tax=Strepto... 139 3e-31 UniRef50_UPI00006CBFCE TPR Domain containing protein n=4 Tax=Tet... 134 1e-29 UniRef50_C5RQT6 Putative uncharacterized protein n=1 Tax=Clostri... 93 3e-17 Sequences not found previously or not previously below threshold: CONVERGED! >UniRef50_P76361 Inner membrane protein yeeR n=25 Tax=Enterobacteriaceae RepID=YEER_ECOLI Length = 510 Score = 918 bits (2372), Expect = 0.0, Method: Composition-based stats. Identities = 510/510 (100%), Positives = 510/510 (100%) Query: 1 MLQIVGALILLIAGFAILRLLFRALISTASALAGLILLCLFGPALLAGYITERITRLFHI 60 MLQIVGALILLIAGFAILRLLFRALISTASALAGLILLCLFGPALLAGYITERITRLFHI Sbjct: 1 MLQIVGALILLIAGFAILRLLFRALISTASALAGLILLCLFGPALLAGYITERITRLFHI 60 Query: 61 RWLAGVFLTIAGMIISFMWGLDGKHIALEAHTFDSVKFILTTALAGGLLAVPLQIKNIQQ 120 RWLAGVFLTIAGMIISFMWGLDGKHIALEAHTFDSVKFILTTALAGGLLAVPLQIKNIQQ Sbjct: 61 RWLAGVFLTIAGMIISFMWGLDGKHIALEAHTFDSVKFILTTALAGGLLAVPLQIKNIQQ 120 Query: 121 NGITPEDISKEINGYYCCFYTAFFLMACSACAPLIALQYDISPSLMWWGGLLYWLAALVT 180 NGITPEDISKEINGYYCCFYTAFFLMACSACAPLIALQYDISPSLMWWGGLLYWLAALVT Sbjct: 121 NGITPEDISKEINGYYCCFYTAFFLMACSACAPLIALQYDISPSLMWWGGLLYWLAALVT 180 Query: 181 LLWAASQIQALKKLTCAISQTLEEQPVLNSKSWLTSLQNDYSLPDSLTERIWLTLISQRI 240 LLWAASQIQALKKLTCAISQTLEEQPVLNSKSWLTSLQNDYSLPDSLTERIWLTLISQRI Sbjct: 181 LLWAASQIQALKKLTCAISQTLEEQPVLNSKSWLTSLQNDYSLPDSLTERIWLTLISQRI 240 Query: 241 SRGELREFELADGNWLLNNAWYERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEAND 300 SRGELREFELADGNWLLNNAWYERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEAND Sbjct: 241 SRGELREFELADGNWLLNNAWYERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEAND 300 Query: 301 DFLDRCLDGGDWYPFSEGRRFVSFHHVDELRICASCGLTEVHHAPENHKPDPEWYCSSLC 360 DFLDRCLDGGDWYPFSEGRRFVSFHHVDELRICASCGLTEVHHAPENHKPDPEWYCSSLC Sbjct: 301 DFLDRCLDGGDWYPFSEGRRFVSFHHVDELRICASCGLTEVHHAPENHKPDPEWYCSSLC 360 Query: 361 RETETLCQEIYERPYNSFISDATANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHI 420 RETETLCQEIYERPYNSFISDATANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHI Sbjct: 361 RETETLCQEIYERPYNSFISDATANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHI 420 Query: 421 VDRVRLKNARILGDNNARNGADRLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNNG 480 VDRVRLKNARILGDNNARNGADRLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNNG Sbjct: 421 VDRVRLKNARILGDNNARNGADRLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNNG 480 Query: 481 PMQLEVPRDQYAGAVETMRNKIREGKVEER 510 PMQLEVPRDQYAGAVETMRNKIREGKVEER Sbjct: 481 PMQLEVPRDQYAGAVETMRNKIREGKVEER 510 >UniRef50_C0R115 Putative uncharacterized protein n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0R115_BRAHW Length = 647 Score = 322 bits (824), Expect = 3e-86, Method: Composition-based stats. Identities = 65/271 (23%), Positives = 123/271 (45%), Gaps = 18/271 (6%) Query: 242 RGELREFELADGNWLLNNAWYERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDD 301 +G++++ L D ++ N ++ + NE +K + + + + L LS E D Sbjct: 72 KGKIKKIYLFDKDYYFNINFFNKCSDKANEIIKLDTRVDKEFAVSSLKETLPLSDECLYD 131 Query: 302 FLDRCLDGGDWYPFSEGRRFVSFHHVDELRICASCGLTEVHHAPENHKPDPEWYCSSLCR 361 F D + F +G FV + D++ ICASCG + + EN+ P+ EW+CS +C Sbjct: 132 FFIVKNDDINLLEFDDGEFFVHNINNDKIVICASCGKAGLISSLENYNPNEEWFCSLICV 191 Query: 362 ETETLCQEIYERPYNSFISDATANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIV 421 TE C +I + F ++ T +++ N+ +F + E ++ Sbjct: 192 STEDKCYKIASQ--KDFPNNYTEPDIVV-----DSDGNQLIFNENYNYNKNKTE---FLI 241 Query: 422 DRVRLKNARILGDNNARNGADRLVSGTEIQTKYCSTAARSVGAAF--DGQNG--QYRYMG 477 +++ N +L ++N ++ V I+ K ++ + F D + G QY+Y Sbjct: 242 NKIDPNNDAVLENDNIFLELEKYVP---IKNKIYKNVEETINSMFIIDEEIGKEQYKYYD 298 Query: 478 NNGP-MQLEVPRDQYAGAVETMRNKIREGKV 507 G + EVP+D Y ++E M+ KI G + Sbjct: 299 EEGKALSFEVPKDFYEASIEKMKEKILNGSI 329 >UniRef50_D2RK21 Putative uncharacterized protein n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RK21_ACIFE Length = 622 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 78/202 (38%), Positives = 103/202 (50%), Gaps = 15/202 (7%) Query: 318 GRRFV--SFHHVDELRICASCGLTEVHHAPENHKPDPEWYCSSLCRETETLCQEIYERPY 375 G F+ H+ + I + G + PE H C L E Sbjct: 8 GPFFLLSQNLHIAYVIISVNAGRSGNGFVPE-HSSTYMLICGGL--HMEKKIYHQNSGLA 64 Query: 376 NSFISDATANGLI--------LMKLPETWSTNEKM-FASGGQGHGFAAERGNHIVDRVRL 426 +A + L ++ + NE+M + QG GFAAE+ N ++D + Sbjct: 65 EKLRKNANEQEKVDTGKIGGSLYGSMDSAAHNEQMLRFNARQGQGFAAEQANDLIDSMGG 124 Query: 427 KNARILGDNNARNGADRLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNNG-PMQLE 485 KNA+I+G++NA+NGADRLV G IQ+KYC TA SV AAF+ Q YRY+ NG PMQLE Sbjct: 125 KNAQIVGNDNAKNGADRLVDGMLIQSKYCQTAQASVNAAFNPQTKYYRYIDRNGTPMQLE 184 Query: 486 VPRDQYAGAVETMRNKIREGKV 507 VP DQY AV+ MR KI EGKV Sbjct: 185 VPSDQYNEAVQLMRRKIAEGKV 206 >UniRef50_C7G879 Putative uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G879_9FIRM Length = 638 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 63/164 (38%), Positives = 94/164 (57%), Gaps = 4/164 (2%) Query: 347 NHKPDPEWY---CSSLCRETETLCQEIYERPYNSFISDATANGLILMKLPETWSTNEKMF 403 N P ++ + + + E +++ + S A A G+ + E+ Sbjct: 126 NKTPLYRFFKELLALIRQPAEDNIEKLNVQTDKSENYGAMAGGISSAAYGQINKLYEEEK 185 Query: 404 ASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGADRLVSGTEIQTKYCSTAARSVG 463 G QGHGFAAER N++ D + +A+I+GD+N +NGADR+V G IQ+KYC T + V Sbjct: 186 FHGRQGHGFAAERANNLYDNLTGHDAKIVGDDNVKNGADRMVDGIFIQSKYCQTGSACVN 245 Query: 464 AAFDGQNGQYRYMGNNGPMQLEVPRDQYAGAVETMRNKIREGKV 507 FD Q G +RY+ + PMQ+EVP D+Y AVE M++KIR+GKV Sbjct: 246 ECFDEQ-GNFRYLKDGKPMQIEVPSDKYDAAVEAMQDKIRKGKV 288 >UniRef50_Q7UUU7 Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica RepID=Q7UUU7_RHOBA Length = 488 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 55/137 (40%), Positives = 72/137 (52%), Gaps = 5/137 (3%) Query: 371 YERPYNSFISDATANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNAR 430 +P N A L + + ++ GHGF AE NH+ D R + A Sbjct: 1 MTQPSNDKRKPAVER-LASPAIAHSLERSQIAKYHTKGGHGFTAEDANHLADVFRGRRAE 59 Query: 431 ILGDNNARNGADRLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNNGPMQLEVPRDQ 490 I+G NN NGADR+V G IQ+KY TAA++V +AF ++G YRY LEVP+DQ Sbjct: 60 IIGINNEANGADRIVDGLRIQSKYYQTAAKTVASAFASESGLYRY----AQQVLEVPKDQ 115 Query: 491 YAGAVETMRNKIREGKV 507 Y VE MR +I GKV Sbjct: 116 YDACVELMRKRIAAGKV 132 >UniRef50_A4BP35 Putative uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BP35_9GAMM Length = 494 Score = 171 bits (433), Expect = 7e-41, Method: Composition-based stats. Identities = 48/138 (34%), Positives = 69/138 (50%), Gaps = 5/138 (3%) Query: 370 IYERPYNSFISDATANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNA 429 I ++ + ANG + + GHGFAAE + + ++ ++A Sbjct: 5 IMANHKKNYPFN-IANGYSAAATASSLEKTQIGKFHTKGGHGFAAEEASALSYKLHGQDA 63 Query: 430 RILGDNNARNGADRLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNNGPMQLEVPRD 489 +I+G N NGAD L +G ++Q KYC + ++ AAF +G YRY G LEVP D Sbjct: 64 KIIGGTNQANGADLLANGVQLQLKYCQSPQATINAAFAPDSGNYRY----GDQVLEVPAD 119 Query: 490 QYAGAVETMRNKIREGKV 507 QY +E MR KI GKV Sbjct: 120 QYESCIELMRQKISGGKV 137 >UniRef50_C9LXG5 Inner membrane protein YeeR n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LXG5_9FIRM Length = 586 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 61/140 (43%), Positives = 86/140 (61%), Gaps = 6/140 (4%) Query: 370 IYERPYNSFISDATANGLILMKLPETWSTNEKM-FASGGQGHGFAAERGNHIVDRVRLKN 428 I +R A G E+ + +++ + QGHG+AAE+ N ++D++ K+ Sbjct: 15 IRQRLQGEEKEGGNAAGFNAA--MESAAHGDRLGRFNARQGHGYAAEQVNDLIDKLSGKD 72 Query: 429 ARILGDNNARNGADRLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNNG-PMQLEVP 487 A ILGD+NA+NG DR+V G IQTKYC+ A +V AAF +NG+YRY+ G PMQLEVP Sbjct: 73 AWILGDDNAKNGPDRMVDGQLIQTKYCANAQATVDAAF--RNGKYRYLDAQGKPMQLEVP 130 Query: 488 RDQYAGAVETMRNKIREGKV 507 DQY ++ M KI EG+V Sbjct: 131 SDQYQASIRCMEEKIAEGQV 150 >UniRef50_A7NRD7 Putative uncharacterized protein n=1 Tax=Roseiflexus castenholzii DSM 13941 RepID=A7NRD7_ROSCS Length = 504 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 55/135 (40%), Positives = 67/135 (49%), Gaps = 4/135 (2%) Query: 373 RPYNSFISDATANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARIL 432 S + GL ++ + GHGFAAE N D +RL+N I Sbjct: 4 NQSFSDRTGKVVMGLASAEIARALERLQISKYHTKGGHGFAAEDANAYGDALRLRNVEIT 63 Query: 433 GDNNARNGADRLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNNGPMQLEVPRDQYA 492 G+ N NG DR+V GT IQTKY T+ ++ AAFD G YRY G LEVP DQY Sbjct: 64 GNANKINGPDRIVDGTPIQTKYFQTSDATINAAFDHTTGLYRYQG----QVLEVPADQYD 119 Query: 493 GAVETMRNKIREGKV 507 VE + KI EGKV Sbjct: 120 ECVELFQRKIAEGKV 134 >UniRef50_A4ECC1 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECC1_9ACTN Length = 730 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 52/109 (47%), Positives = 67/109 (61%), Gaps = 1/109 (0%) Query: 400 EKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGADRLVSGTEIQTKYCSTAA 459 ++ + GHG AE N I+DR++ A ILG +NA+NGADR V G IQTKY TA Sbjct: 256 QRAAVNNPAGHGELAEEANSIIDRLQGHQAEILGRDNAKNGADRSVDGVLIQTKYYKTAR 315 Query: 460 RSVGAAFDGQNGQYRYMGNN-GPMQLEVPRDQYAGAVETMRNKIREGKV 507 S+ A FD + QYRY+ + PMQLEVP+DQY + KI +GKV Sbjct: 316 GSLEACFDPSSHQYRYLTEDRTPMQLEVPKDQYQQVLRGFEKKISQGKV 364 >UniRef50_B9WSS5 Putative uncharacterized protein n=1 Tax=Streptococcus suis 89/1591 RepID=B9WSS5_STRSU Length = 349 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 51/139 (36%), Positives = 82/139 (58%), Gaps = 10/139 (7%) Query: 374 PYNSFISDATANGLILMKLPETWSTNEKMFA---SGGQGHGFAAERGNHIVDRVRLKNAR 430 +F + A +I + + + + F QGHG AAE N+++D+++ + Sbjct: 211 HTENFQNGAKIGSIIGLNMMLGFHLKDIQFNAIAKAPQGHGHAAEYANNVIDKIKYPFQK 270 Query: 431 I--LGDNNARNGADRLVSGTEIQTKYCSTAARSVGAAFDGQN-GQYRYMGNNGPMQLEVP 487 + +G +N +NGADR+V +IQTKY + A+ ++ AAFD N G+YRY G MQLEVP Sbjct: 271 VEQVGRDNVKNGADRIVGNQKIQTKYYAKASGTINAAFDKANGGEYRYKG----MQLEVP 326 Query: 488 RDQYAGAVETMRNKIREGK 506 +DQY +++ M+ KI+ GK Sbjct: 327 KDQYNESIQLMKKKIKAGK 345 >UniRef50_UPI00006CBFCE TPR Domain containing protein n=4 Tax=Tetrahymena thermophila RepID=UPI00006CBFCE Length = 790 Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 42/141 (29%), Positives = 73/141 (51%), Gaps = 15/141 (10%) Query: 373 RPYNSFISDATANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARIL 432 + + + L + N+ + + QGHG+AAE+ N+++D ++ A +L Sbjct: 4 QKKIKYTKNLKVPPYNLQNDGKY--YNDTLKFNARQGHGYAAEQANNLIDELKGDKAVVL 61 Query: 433 GDNNARNGADRLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNNGPMQLEVPRDQYA 492 + +NG DR+V+G IQTKYC A + F ++G++RY G Q+EVP +QY Sbjct: 62 NEY-IKNGPDRIVNGNLIQTKYCKNAYSTFKNCF--KDGEFRYNG----QQIEVPPEQYD 114 Query: 493 GAVETMRNK------IREGKV 507 ++ ++K IR+G V Sbjct: 115 EVIQLFQDKGIKDVTIRKGHV 135 >UniRef50_C5RQT6 Putative uncharacterized protein n=1 Tax=Clostridium cellulovorans 743B RepID=C5RQT6_CLOCL Length = 590 Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Query: 429 ARILGDNNARNGADRLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNNGP---MQLE 485 ++ NN + D +IQT YC +A + + F+ +N + + +++E Sbjct: 163 DTVIKINNDVSSIDSFKGDVKIQTYYCESAEKFINQFFNEEN-DFLLCDSKQKVKNIRIE 221 Query: 486 VPRDQYAGAVETMRNKIREGKV 507 VP+D Y V+ M KI+EG + Sbjct: 222 VPKDIYIEVVKLMSEKIKEGMI 243 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.318 0.134 0.378 Lambda K H 0.267 0.0412 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,039,171,723 Number of Sequences: 3077464 Number of extensions: 124219229 Number of successful extensions: 379028 Number of sequences better than 1.0e-01: 13 Number of HSP's better than 0.1 without gapping: 33 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 378941 Number of HSP's gapped (non-prelim): 42 length of query: 510 length of database: 1,040,396,356 effective HSP length: 133 effective length of query: 377 effective length of database: 631,093,644 effective search space: 237922303788 effective search space used: 237922303788 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 95 (41.2 bits)