Phyre 2 alignment of P76361 with d1mm2a_

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Job Description | P76361
Confidence | 6.87% | Date | Thu Jan 5 12:22:20 GMT 2012
Rank | 96 | Aligned Residues | 32
% Identity | 31% | Template | d1mm2a_
SCOP info | FYVE/PHD zinc finger | FYVE/PHD zinc finger | PHD domain
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 325 | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . |  |  |  | . | . | . | . | . | . | 350 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | H | H | V | D | E | L | R | I | C | A | S | C | G | L | T | E | V | H | H | . | . | . | A | P | E | N | H | K | P | D | P | E | W | Y | C
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | D | G | G | E | L | L | C | C | D | T | C | P | S | S | Y | H | I | H | C | L | N | P | P | L | P | E | I | P | N | G | E | W | L | C
Template Known Secondary structure |  |  |  |  | S | S |  | B |  |  | S | S | S |  |  |  | B |  | S | S | S | S | S | S |  |  | S | S |  |  | S | S |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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