Phyre 2 alignment of P76361 with c2l43A_

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Job Description | P76361
Confidence | 12.71% | Date | Thu Jan 5 12:22:20 GMT 2012
Rank | 45 | Aligned Residues | 32
% Identity | 19% | Template | c2l43A_
PDB info | PDB header:transcription | Chain: A: PDB Molecule:n-teminal domain from histone h3.3, linker, phd1 domain | PDBTitle: structural basis for histone code recognition by brpf2-phd1 finger
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 326 | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . |  | . | . | 350 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |
Query Sequence |  | H | V | D | E | L | R | I | C | A | S | C | G | L | T | E | V | H | H | A | P | E | N | . | H | K | P | D | P | E | W | Y | C | S
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | N | S | N | V | I | L | F | C | D | M | C | N | L | A | V | H | Q | E | C | Y | G | V | P | Y | I | P | E | G | Q | W | L | C | R
Template Known Secondary structure |  | S |  |  |  |  |  |  |  | S | S | S |  |  |  |  |  |  |  |  |  | T |  | S | S |  |  | S | S |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 38 | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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