Phyre 2 Results for P76361

Email | l.a.kelley@imperial.ac.uk
Description | P76361
Date | Thu Jan 5 12:22:20 GMT 2012
Unique Job ID | 6065ac5873f4750b

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | d1vlpa1 |
|  | 61.7 | 26 | Fold:alpha/beta-Hammerhead Superfamily:Nicotinate/Quinolinate PRTase N-terminal domain-like Family:Monomeric nicotinate phosphoribosyltransferase N-terminal domain-like
2 | d1us7b_ |
|  | 45.1 | 32 | Fold:Hsp90 co-chaperone CDC37 Superfamily:Hsp90 co-chaperone CDC37 Family:Hsp90 co-chaperone CDC37
3 | c1us7B_ |
|  | 45.1 | 32 | PDB header:chaperone Chain: B: PDB Molecule:hsp90 co-chaperone cdc37; PDBTitle: complex of hsp90 and p50
4 | c2puyA_ |
|  | 39.5 | 26 | PDB header:transcription Chain: A: PDB Molecule:phd finger protein 21a; PDBTitle: crystal structure of the bhc80 phd finger
5 | d2f7fa2 |
|  | 35.7 | 25 | Fold:alpha/beta-Hammerhead Superfamily:Nicotinate/Quinolinate PRTase N-terminal domain-like Family:NadC N-terminal domain-like
6 | d1k0ga_ |
|  | 33.6 | 17 | Fold:ADC synthase Superfamily:ADC synthase Family:ADC synthase
7 | d1ybea2 |
|  | 33.2 | 26 | Fold:alpha/beta-Hammerhead Superfamily:Nicotinate/Quinolinate PRTase N-terminal domain-like Family:Monomeric nicotinate phosphoribosyltransferase N-terminal domain-like
8 | d1i7qa_ |
|  | 32.7 | 17 | Fold:ADC synthase Superfamily:ADC synthase Family:ADC synthase
9 | d1i1qa_ |
|  | 31.5 | 16 | Fold:ADC synthase Superfamily:ADC synthase Family:ADC synthase
10 | c1vlpA_ |
|  | 30.0 | 26 | PDB header:transferase Chain: A: PDB Molecule:nicotinate phosphoribosyltransferase; PDBTitle: crystal structure of a putative nicotinate phosphoribosyltransferase2 (yor209c, npt1) from saccharomyces cerevisiae at 1.75 a resolution
11 | d1j96a_ |
|  | 29.9 | 26 | Fold:TIM beta/alpha-barrel Superfamily:NAD(P)-linked oxidoreductase Family:Aldo-keto reductases (NADP)
12 | d1weqa_ |
|  | 28.6 | 24 | Fold:FYVE/PHD zinc finger Superfamily:FYVE/PHD zinc finger Family:PHD domain
13 | d1q5ma_ |
|  | 28.3 | 33 | Fold:TIM beta/alpha-barrel Superfamily:NAD(P)-linked oxidoreductase Family:Aldo-keto reductases (NADP)
14 | d1zbdb_ |
|  | 26.9 | 26 | Fold:FYVE/PHD zinc finger Superfamily:FYVE/PHD zinc finger Family:FYVE, a phosphatidylinositol-3-phosphate binding domain
15 | d1yira2 |
|  | 26.6 | 27 | Fold:alpha/beta-Hammerhead Superfamily:Nicotinate/Quinolinate PRTase N-terminal domain-like Family:Monomeric nicotinate phosphoribosyltransferase N-terminal domain-like
16 | d1ah4a_ |
|  | 25.2 | 33 | Fold:TIM beta/alpha-barrel Superfamily:NAD(P)-linked oxidoreductase Family:Aldo-keto reductases (NADP)
17 | c3o37D_ |
|  | 24.0 | 38 | PDB header:transcription/protein binding Chain: D: PDB Molecule:transcription intermediary factor 1-alpha; PDBTitle: crystal structure of trim24 phd-bromo complexed with h3(1-10)k42 peptide
18 | d2alra_ |
|  | 22.6 | 29 | Fold:TIM beta/alpha-barrel Superfamily:NAD(P)-linked oxidoreductase Family:Aldo-keto reductases (NADP)
19 | d1hqta_ |
|  | 21.8 | 32 | Fold:TIM beta/alpha-barrel Superfamily:NAD(P)-linked oxidoreductase Family:Aldo-keto reductases (NADP)
20 | d3ctaa2 |
|  | 21.5 | 22 | Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin kinase-like Family:CTP-dependent riboflavin kinase-like
21 | c2riqA_ |
| not modelled | 20.6 | 28 | PDB header:transferase Chain: A: PDB Molecule:poly [adp-ribose] polymerase 1; PDBTitle: crystal structure of the third zinc-binding domain of human parp-1
22 | c3b4sA_ |
| not modelled | 20.0 | 56 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:protein luxt; PDBTitle: crystal structure of a luxt domain from vibrio2 parahaemolyticus rimd 2210633
23 | d1mn4a_ |
| not modelled | 19.6 | 45 | Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f Superfamily:p53-like transcription factors Family:DNA-binding domain from NDT80
24 | c1yj7A_ |
| not modelled | 19.5 | 19 | PDB header:protein transport Chain: A: PDB Molecule:escj; PDBTitle: crystal structure of enteropathogenic e.coli (epec) type iii secretion2 system protein escj
25 | c2obnA_ |
| not modelled | 19.2 | 26 | PDB header:unknown function Chain: A: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a duf1611 family protein (ava_3511) from anabaena2 variabilis atcc 29413 at 2.30 a resolution
26 | c1xwhA_ |
| not modelled | 19.2 | 41 | PDB header:transcription Chain: A: PDB Molecule:autoimmune regulator; PDBTitle: nmr structure of the first phd finger of autoimmune2 regulator protein (aire1): insights into apeced
27 | c2jvnA_ |
| not modelled | 18.7 | 30 | PDB header:transferase Chain: A: PDB Molecule:poly [adp-ribose] polymerase 1; PDBTitle: domain c of human parp-1
28 | d2g5fa1 |
| not modelled | 16.8 | 10 | Fold:ADC synthase Superfamily:ADC synthase Family:ADC synthase
29 | d1q4qa_ |
| not modelled | 15.6 | 21 | Fold:Inhibitor of apoptosis (IAP) repeat Superfamily:Inhibitor of apoptosis (IAP) repeat Family:Inhibitor of apoptosis (IAP) repeat
30 | d1iega_ |
| not modelled | 15.2 | 39 | Fold:Herpes virus serine proteinase, assemblin Superfamily:Herpes virus serine proteinase, assemblin Family:Herpes virus serine proteinase, assemblin
31 | c3mhsE_ |
| not modelled | 15.0 | 33 | PDB header:hydrolase/transcription regulator/protei Chain: E: PDB Molecule:saga-associated factor 73; PDBTitle: structure of the saga ubp8/sgf11/sus1/sgf73 dub module bound to2 ubiquitin aldehyde
32 | c3h9mA_ |
| not modelled | 14.8 | 21 | PDB header:lyase Chain: A: PDB Molecule:p-aminobenzoate synthetase, component i; PDBTitle: crystal structure of para-aminobenzoate synthetase,2 component i from cytophaga hutchinsonii
33 | d2p6ra2 |
| not modelled | 14.6 | 26 | Fold:Sec63 N-terminal domain-like Superfamily:Sec63 N-terminal domain-like Family:Achaeal helicase C-terminal domain
34 | d1afsa_ |
| not modelled | 14.4 | 28 | Fold:TIM beta/alpha-barrel Superfamily:NAD(P)-linked oxidoreductase Family:Aldo-keto reductases (NADP)
35 | c2im5C_ |
| not modelled | 14.3 | 26 | PDB header:transferase Chain: C: PDB Molecule:nicotinate phosphoribosyltransferase; PDBTitle: crystal structure of nicotinate phosphoribosyltransferase2 from porphyromonas gingivalis
36 | d1at3a_ |
| not modelled | 14.0 | 19 | Fold:Herpes virus serine proteinase, assemblin Superfamily:Herpes virus serine proteinase, assemblin Family:Herpes virus serine proteinase, assemblin
37 | c2f6nA_ |
| not modelled | 13.7 | 21 | PDB header:transcription Chain: A: PDB Molecule:bromodomain phd finger transcription factor; PDBTitle: crystal structure of phd finger-linker-bromodomain fragment2 of human bptf in the free form
38 | d2g0ta1 |
| not modelled | 13.7 | 24 | Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Nitrogenase iron protein-like
39 | d1us0a_ |
| not modelled | 13.3 | 38 | Fold:TIM beta/alpha-barrel Superfamily:NAD(P)-linked oxidoreductase Family:Aldo-keto reductases (NADP)
40 | c2i6yA_ |
| not modelled | 13.3 | 10 | PDB header:lyase Chain: A: PDB Molecule:anthranilate synthase component i, putative; PDBTitle: structure and mechanism of mycobacterium tuberculosis salicylate2 synthase, mbti
41 | c2fqxA_ |
| not modelled | 13.3 | 22 | PDB header:transport protein Chain: A: PDB Molecule:membrane lipoprotein tmpc; PDBTitle: pnra from treponema pallidum complexed with guanosine
42 | c2f7fA_ |
| not modelled | 13.3 | 25 | PDB header:transferase Chain: A: PDB Molecule:nicotinate phosphoribosyltransferase, putative; PDBTitle: crystal structure of enterococcus faecalis putative nicotinate2 phosphoribosyltransferase, new york structural genomics consortium
43 | d2pbka1 |
| not modelled | 13.1 | 32 | Fold:Herpes virus serine proteinase, assemblin Superfamily:Herpes virus serine proteinase, assemblin Family:Herpes virus serine proteinase, assemblin
44 | d1ubdc2 |
| not modelled | 13.0 | 38 | Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2
45 | c2l43A_ |
| not modelled | 12.7 | 19 | PDB header:transcription Chain: A: PDB Molecule:n-teminal domain from histone h3.3, linker, phd1 domain PDBTitle: structural basis for histone code recognition by brpf2-phd1 finger
46 | c2bs5A_ |
| not modelled | 12.5 | 47 | PDB header:sugar binding protein Chain: A: PDB Molecule:fucose-binding lectin protein; PDBTitle: lectin from ralstonia solanacearum complexed with 2-2 fucosyllactose
47 | d3efxd1 |
| not modelled | 12.4 | 43 | Fold:OB-fold Superfamily:Bacterial enterotoxins Family:Bacterial AB5 toxins, B-subunits
48 | d1vzva_ |
| not modelled | 12.4 | 21 | Fold:Herpes virus serine proteinase, assemblin Superfamily:Herpes virus serine proteinase, assemblin Family:Herpes virus serine proteinase, assemblin
49 | d1vqow1 |
| not modelled | 12.4 | 13 | Fold:Ribosomal protein L30p/L7e Superfamily:Ribosomal protein L30p/L7e Family:Ribosomal protein L30p/L7e
50 | c3bu8B_ |
| not modelled | 11.8 | 16 | PDB header:dna binding protein Chain: B: PDB Molecule:telomeric repeat-binding factor 2; PDBTitle: crystal structure of trf2 trfh domain and tin2 peptide2 complex
51 | d1qdla_ |
| not modelled | 11.6 | 18 | Fold:ADC synthase Superfamily:ADC synthase Family:ADC synthase
52 | d1x3ha2 |
| not modelled | 11.3 | 36 | Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:LIM domain
53 | c3pstA_ |
| not modelled | 11.1 | 17 | PDB header:nuclear protein Chain: A: PDB Molecule:protein doa1; PDBTitle: crystal structure of pul and pfu(mutate) domain
54 | d1xg8a_ |
| not modelled | 11.0 | 83 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:YuzD-like
55 | d2olua1 |
| not modelled | 10.9 | 10 | Fold:Lysozyme-like Superfamily:Lysozyme-like Family:PBP transglycosylase domain-like
56 | c3d6zA_ |
| not modelled | 10.6 | 33 | PDB header:transcription regulator/dna Chain: A: PDB Molecule:multidrug-efflux transporter 1 regulator; PDBTitle: crystal structure of r275e mutant of bmrr bound to dna and rhodamine
57 | c2euzA_ |
| not modelled | 10.6 | 50 | PDB header:cell cycle/dna Chain: A: PDB Molecule:ndt80 protein; PDBTitle: structure of a ndt80-dna complex (mse mutant mc5t)
58 | d1mnna_ |
| not modelled | 10.6 | 50 | Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f Superfamily:p53-like transcription factors Family:DNA-binding domain from NDT80
59 | c3elfA_ |
| not modelled | 10.5 | 20 | PDB header:lyase Chain: A: PDB Molecule:fructose-bisphosphate aldolase; PDBTitle: structural characterization of tetrameric mycobacterium tuberculosis2 fructose 1,6-bisphosphate aldolase - substrate binding and catalysis3 mechanism of a class iia bacterial aldolase
60 | d1o6ea_ |
| not modelled | 10.0 | 29 | Fold:Herpes virus serine proteinase, assemblin Superfamily:Herpes virus serine proteinase, assemblin Family:Herpes virus serine proteinase, assemblin
61 | d3chbd_ |
| not modelled | 10.0 | 44 | Fold:OB-fold Superfamily:Bacterial enterotoxins Family:Bacterial AB5 toxins, B-subunits
62 | c3ln3A_ |
| not modelled | 10.0 | 39 | PDB header:oxidoreductase Chain: A: PDB Molecule:dihydrodiol dehydrogenase; PDBTitle: crystal structure of putative reductase (np_038806.2) from2 mus musculus at 1.18 a resolution
63 | c2krcA_ |
| not modelled | 9.6 | 43 | PDB header:transcription Chain: A: PDB Molecule:dna-directed rna polymerase subunit delta; PDBTitle: solution structure of the n-terminal domain of bacillus2 subtilis delta subunit of rna polymerase
64 | c2ysmA_ |
| not modelled | 9.5 | 23 | PDB header:transferase Chain: A: PDB Molecule:myeloid/lymphoid or mixed-lineage leukemia PDBTitle: solution structure of the first and second phd domain from2 myeloid/lymphoid or mixed-lineage leukemia protein 33 homolog
65 | c2w0tA_ |
| not modelled | 9.4 | 31 | PDB header:transcription Chain: A: PDB Molecule:lethal(3)malignant brain tumor-like 2 protein; PDBTitle: solution structure of the fcs zinc finger domain of human2 lmbl2
66 | c2l7pA_ |
| not modelled | 9.3 | 13 | PDB header:transferase Chain: A: PDB Molecule:histone-lysine n-methyltransferase ashh2; PDBTitle: ashh2 a cw domain
67 | c2a20A_ |
| not modelled | 9.3 | 26 | PDB header:metal binding protein Chain: A: PDB Molecule:regulating synaptic membrane exocytosis protein PDBTitle: solution structure of rim2 zinc finger domain
68 | c2e6rA_ |
| not modelled | 9.3 | 24 | PDB header:dna binding protein Chain: A: PDB Molecule:jumonji/arid domain-containing protein 1d; PDBTitle: solution structure of the phd domain in smcy protein
69 | d1npba_ |
| not modelled | 9.0 | 31 | Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Antibiotic resistance proteins
70 | c3os6A_ |
| not modelled | 9.0 | 17 | PDB header:isomerase Chain: A: PDB Molecule:isochorismate synthase dhbc; PDBTitle: crystal structure of putative 2,3-dihydroxybenzoate-specific2 isochorismate synthase, dhbc from bacillus anthracis.
71 | d1olma1 |
| not modelled | 8.7 | 20 | Fold:RuvA C-terminal domain-like Superfamily:CRAL/TRIO N-terminal domain Family:CRAL/TRIO N-terminal domain
72 | d2af7a1 |
| not modelled | 8.6 | 16 | Fold:AhpD-like Superfamily:AhpD-like Family:CMD-like
73 | d1kjna_ |
| not modelled | 8.4 | 29 | Fold:Hypothetical protein MTH777 (MT0777) Superfamily:Hypothetical protein MTH777 (MT0777) Family:Hypothetical protein MTH777 (MT0777)
74 | d2h1ta1 |
| not modelled | 8.3 | 27 | Fold:Spiral beta-roll Superfamily:PA1994-like Family:PA1994-like
75 | d1c8aa2 |
| not modelled | 8.2 | 35 | Fold:beta-clip Superfamily:AFP III-like domain Family:AFP III-like domain
76 | d1l0nk_ |
| not modelled | 8.2 | 33 | Fold:Single transmembrane helix Superfamily:Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Family:Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
77 | d1i8ta1 |
| not modelled | 8.0 | 31 | Fold:Nucleotide-binding domain Superfamily:Nucleotide-binding domain Family:UDP-galactopyranose mutase, N-terminal domain
78 | d2bv3a5 |
| not modelled | 7.9 | 17 | Fold:Ferredoxin-like Superfamily:EF-G C-terminal domain-like Family:EF-G/eEF-2 domains III and V
79 | c2wghA_ |
| not modelled | 7.9 | 24 | PDB header:oxidoreductase Chain: A: PDB Molecule:ribonucleoside-diphosphate reductase large PDBTitle: human ribonucleotide reductase r1 subunit (rrm1) in complex2 with datp and mg.
80 | d2ezla_ |
| not modelled | 7.8 | 36 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Recombinase DNA-binding domain
81 | c4a1cV_ |
| not modelled | 7.6 | 16 | PDB header:ribosome Chain: V: PDB Molecule:60s ribosomal protein l7; PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 4.
82 | c2zkr2_ |
| not modelled | 7.6 | 60 | PDB header:ribosomal protein/rna Chain: 2: PDB Molecule:60s ribosomal protein l37e; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map
83 | d2fyuk1 |
| not modelled | 7.6 | 39 | Fold:Single transmembrane helix Superfamily:Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Family:Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
84 | c2cvuA_ |
| not modelled | 7.6 | 32 | PDB header:oxidoreductase Chain: A: PDB Molecule:ribonucleoside-diphosphate reductase large chain PDBTitle: structures of yeast ribonucleotide reductase i
85 | c3p5rB_ |
| not modelled | 7.4 | 23 | PDB header:lyase Chain: B: PDB Molecule:taxadiene synthase; PDBTitle: crystal structure of taxadiene synthase from pacific yew (taxus2 brevifolia) in complex with mg2+ and 2-fluorogeranylgeranyl3 diphosphate
86 | c3r1rB_ |
| not modelled | 7.4 | 28 | PDB header:complex (oxidoreductase/peptide) Chain: B: PDB Molecule:ribonucleotide reductase r1 protein; PDBTitle: ribonucleotide reductase r1 protein with amppnp occupying2 the activity site from escherichia coli
87 | c3jueA_ |
| not modelled | 7.4 | 32 | PDB header:protein transport/endocytosis Chain: A: PDB Molecule:arfgap with coiled-coil, ank repeat and ph domain- PDBTitle: crystal structure of arfgap and ank repeat domain of acap1
88 | d2yt9a1 |
| not modelled | 7.3 | 63 | Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2
89 | c1s1iY_ |
| not modelled | 7.2 | 80 | PDB header:ribosome Chain: Y: PDB Molecule:60s ribosomal protein l37-a; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1i,4 contains 60s subunit. the 40s ribosomal subunit is in file5 1s1h.
90 | c3jywY_ |
| not modelled | 7.2 | 80 | PDB header:ribosome Chain: Y: PDB Molecule:60s ribosomal protein l37(a); PDBTitle: structure of the 60s proteins for eukaryotic ribosome based on cryo-em2 map of thermomyces lanuginosus ribosome at 8.9a resolution
91 | c2olvA_ |
| not modelled | 7.1 | 9 | PDB header:transferase Chain: A: PDB Molecule:penicillin-binding protein 2; PDBTitle: structural insight into the transglycosylation step of bacterial cell2 wall biosynthesis : donor ligand complex
92 | d1b8da_ |
| not modelled | 7.1 | 28 | Fold:Globin-like Superfamily:Globin-like Family:Phycocyanin-like phycobilisome proteins
93 | c3fehA_ |
| not modelled | 7.1 | 38 | PDB header:hydrolase activator Chain: A: PDB Molecule:centaurin-alpha-1; PDBTitle: crystal structure of full length centaurin alpha-1
94 | c3k7bA_ |
| not modelled | 7.0 | 36 | PDB header:viral protein Chain: A: PDB Molecule:protein a33; PDBTitle: the structure of the poxvirus a33 protein reveals a dimer of unique c-2 type lectin-like domains.
95 | d1xp3a1 |
| not modelled | 6.9 | 22 | Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:Endonuclease IV
96 | d1mm2a_ |
| not modelled | 6.9 | 31 | Fold:FYVE/PHD zinc finger Superfamily:FYVE/PHD zinc finger Family:PHD domain
97 | d1bb8a_ |
| not modelled | 6.8 | 33 | Fold:DNA-binding domain Superfamily:DNA-binding domain Family:DNA-binding domain from tn916 integrase
98 | d1zina2 |
| not modelled | 6.8 | 71 | Fold:Rubredoxin-like Superfamily:Microbial and mitochondrial ADK, insert "zinc finger" domain Family:Microbial and mitochondrial ADK, insert "zinc finger" domain
99 | c1ybeA_ |
| not modelled | 6.7 | 23 | PDB header:transferase Chain: A: PDB Molecule:nicotinate phosphoribosyltransferase; PDBTitle: crystal structure of a nicotinate phosphoribosyltransferase