Phyre 2 alignment of P76361 with c2e6rA_

Return to main results | Retrieve Phyre Job Id

Job Description | P76361
Confidence | 9.28% | Date | Thu Jan 5 12:22:20 GMT 2012
Rank | 68 | Aligned Residues | 33
% Identity | 24% | Template | c2e6rA_
PDB info | PDB header:dna binding protein | Chain: A: PDB Molecule:jumonji/arid domain-containing protein 1d; | PDBTitle: solution structure of the phd domain in smcy protein
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 325 | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . |  |  |  | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | H | H | V | D | E | L | R | I | C | A | S | C | G | L | T | E | V | . | . | . | H | H | A | P | E | N | H | K | P | D | P | E | W | Y | C | S
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | D | E | D | D | K | L | L | F | C | D | G | C | D | D | N | Y | H | I | F | C | L | L | P | P | L | P | E | I | P | R | G | I | W | R | C | P
Template Known Secondary structure |  | G | G | G | G | G |  |  |  |  | T | T | T |  |  |  |  |  | S | S | S | S | S | S |  |  | S | S |  |  | S | S |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 26 | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions