Phyre 2 alignment of P76361 with d1mnna_

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Job Description | P76361
Confidence | 10.60% | Date | Thu Jan 5 12:22:20 GMT 2012
Rank | 58 | Aligned Residues | 22
% Identity | 50% | Template | d1mnna_
SCOP info | Common fold of diphtheria toxin/transcription factors/cytochrome f | p53-like transcription factors | DNA-binding domain from NDT80
Resolution | 1.40

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 236 | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | I | S | Q | R | I | S | R | G | E | L | R | E | F | E | L | A | D | G | N | W | L | L | N | N | A | W | Y | E | R | N
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |
Template Sequence |  | I | I | P | R | I | D | R | G | . | . | . | . | F | D | H | I | D | E | E | W | V | G | . | . | . | . | Y | K | R | N
Template Known Secondary structure |  |  |  |  |  |  |  |  | S | . | . | . | . |  |  |  |  | T | T |  |  |  |  | . | . | . | . |  | T | T | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 91 | . | . | . | . | . | . | . |  |  |  |  | . | 100 | . | . | . | . | . | . | . | . |  |  |  |  | . | 110 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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