BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (445 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P31979 NADH-quinone oxidoreductase subunit F n=44 Tax=E... 916 0.0 UniRef50_Q9I0J7 NADH-quinone oxidoreductase subunit F n=193 Tax=... 711 0.0 UniRef50_Q608Y1 NADH dehydrogenase I, F subunit n=4 Tax=Gammapro... 531 e-149 UniRef50_A5FXJ6 NADH dehydrogenase (Quinone) n=11 Tax=Proteobact... 463 e-129 UniRef50_Q20Z43 NADH dehydrogenase (Quinone) n=2 Tax=Rhodopseudo... 421 e-116 UniRef50_A5GD11 NADH dehydrogenase (Quinone) n=6 Tax=Deltaproteo... 411 e-113 UniRef50_D0LDB1 NADH-quinone oxidoreductase, F subunit n=45 Tax=... 397 e-109 UniRef50_Q9RU92 NADH dehydrogenase I, F subunit n=1 Tax=Deinococ... 393 e-108 UniRef50_Q9XAQ9 NADH-quinone oxidoreductase subunit F n=56 Tax=B... 392 e-108 UniRef50_Q56222 NADH-quinone oxidoreductase subunit 1 n=16 Tax=B... 391 e-107 UniRef50_A6FCN1 NuoF2 NADH I CHAIN F n=1 Tax=Moritella sp. PE36 ... 387 e-106 UniRef50_Q6MDR1 Probable NADH-ubiquinone oxidoreductase chain F ... 380 e-104 UniRef50_A7NPE5 NADH-quinone oxidoreductase, F subunit n=9 Tax=B... 373 e-102 UniRef50_B1L9S5 NADH dehydrogenase (Quinone) n=14 Tax=Bacteria R... 368 e-100 UniRef50_C4XMN9 NADH-quinone oxidoreductase chain F n=5 Tax=Delt... 367 e-100 UniRef50_A5FKK2 NADH dehydrogenase subunit F n=18 Tax=Bacteria R... 366 e-100 UniRef50_Q2S5I8 Respiratory-chain NADH dehydrogenase 51 Kd subun... 365 2e-99 UniRef50_A7HLR0 NADH dehydrogenase (Quinone) n=58 Tax=Bacteria R... 364 4e-99 UniRef50_Q2LS97 NADH-quinone oxidoreductase chain F n=2 Tax=Synt... 359 9e-98 UniRef50_C8W2X2 NADH dehydrogenase (Quinone) n=24 Tax=Bacteria R... 358 2e-97 UniRef50_Q1DDC8 NADH dehydrogenase I, F subunit n=5 Tax=Bacteria... 356 1e-96 UniRef50_C6X0Z6 NADH-ubiquinone oxidoreductase chain F n=2 Tax=B... 353 6e-96 UniRef50_B0TIC6 NADH dehydrogenase conserved domain protein, nuo... 353 1e-95 UniRef50_B2ULY8 NADH dehydrogenase (Quinone) n=58 Tax=Bacteria R... 352 1e-95 UniRef50_D2R5G5 NADH dehydrogenase (Quinone) n=3 Tax=Planctomyce... 349 9e-95 UniRef50_C1A8Y9 NADH-quinone oxidoreductase chain F n=1 Tax=Gemm... 345 2e-93 UniRef50_B8FFJ2 Respiratory-chain NADH dehydrogenase domain 51 k... 343 7e-93 UniRef50_Q3A639 NADH:ubiquinone oxidoreductase, NADH-binding (51... 340 6e-92 UniRef50_C0GLW6 NADH dehydrogenase (Quinone) n=2 Tax=Desulfonatr... 339 1e-91 UniRef50_C1F9D7 NADH dehydrogenase I, F subunit n=1 Tax=Acidobac... 339 2e-91 UniRef50_O66841 NADH-quinone oxidoreductase subunit F n=6 Tax=Aq... 336 1e-90 UniRef50_A8MJ02 NADH dehydrogenase (Quinone) n=4 Tax=Bacteria Re... 335 2e-90 UniRef50_B1ZTP3 NADH dehydrogenase (Quinone) n=1 Tax=Opitutus te... 335 3e-90 UniRef50_Q2LYA9 NADH:ubiquinone oxidoreductase, NADH-binding sub... 334 3e-90 UniRef50_A3DCA0 NADH dehydrogenase (Quinone) n=10 Tax=cellular o... 334 5e-90 UniRef50_Q39TW5 Respiratory-chain NADH dehydrogenase domain, 51 ... 333 5e-90 UniRef50_B4SQT1 NADH-quinone oxidoreductase, F subunit n=16 Tax=... 332 2e-89 UniRef50_C6A4M4 NADH:ubiquinone oxidoreductase, NADH-binding sub... 331 3e-89 UniRef50_A7HJL0 NADH dehydrogenase (Quinone) n=5 Tax=Bacteria Re... 330 6e-89 UniRef50_D2BG77 [Fe] hydrogenase, HymB subunit n=6 Tax=cellular ... 330 7e-89 UniRef50_A8GM77 NADH-quinone oxidoreductase subunit F n=17 Tax=P... 328 2e-88 UniRef50_Q39QB2 NADH dehydrogenase I, F subunit n=5 Tax=Bacteria... 327 7e-88 UniRef50_C9RJK0 NADH dehydrogenase (Quinone) n=1 Tax=Fibrobacter... 326 1e-87 UniRef50_O27592 NADP-reducing hydrogenase, subunit C n=5 Tax=cel... 326 1e-87 UniRef50_D0LZ02 NADH-quinone oxidoreductase, F subunit n=1 Tax=H... 325 2e-87 UniRef50_Q2FP97 NADH dehydrogenase (Quinone) n=2 Tax=Methanomicr... 325 2e-87 UniRef50_B6ALB9 NADH dehydrogenase (Quinone) n=3 Tax=Leptospiril... 323 7e-87 UniRef50_P49821 NADH dehydrogenase [ubiquinone] flavoprotein 1, ... 322 1e-86 UniRef50_A1VM65 NADH-quinone oxidoreductase, F subunit n=162 Tax... 321 3e-86 UniRef50_A1ALP4 NADH dehydrogenase (Quinone) n=1 Tax=Pelobacter ... 320 5e-86 UniRef50_Q9ZBV8 Putative respiratory chain oxidoreductase n=4 Ta... 318 3e-85 UniRef50_Q0AYU9 NADH dehydrogenase (Quinone) n=4 Tax=Bacteria Re... 317 4e-85 UniRef50_C6SUV8 MIP04331p (Fragment) n=3 Tax=Drosophila melanoga... 315 2e-84 UniRef50_B6JB78 NADH dehydrogenase i chain f n=1 Tax=Oligotropha... 313 1e-83 UniRef50_C7NU21 NADH dehydrogenase (Quinone) n=5 Tax=cellular or... 311 2e-83 UniRef50_C1YSE4 NADH:ubiquinone oxidoreductase, NADH-binding (51... 310 1e-82 UniRef50_A9EX79 NADH dehydrogenase (Ubiquinone) n=1 Tax=Sorangiu... 306 8e-82 UniRef50_Q2LQE7 NADH-quinone oxidoreductase chain F n=1 Tax=Synt... 306 1e-81 UniRef50_B5IPC7 Formate dehydrogenase, beta subunit n=1 Tax=Cyan... 306 1e-81 UniRef50_B8HVQ4 NADH dehydrogenase (Quinone) n=11 Tax=Bacteria R... 305 3e-81 UniRef50_B5ICD1 Respiratory-chain NADH dehydrogenase 51 Kd subun... 303 1e-80 UniRef50_C7M2U2 NADH dehydrogenase (Quinone) n=1 Tax=Acidimicrob... 301 2e-80 UniRef50_B2KCG6 NADH dehydrogenase (Quinone) n=3 Tax=Bacteria Re... 300 5e-80 UniRef50_C1AB34 NADH-quinone oxidoreductase chain F n=1 Tax=Gemm... 300 7e-80 UniRef50_C0GLX1 NADH dehydrogenase (Quinone) n=1 Tax=Desulfonatr... 299 1e-79 UniRef50_A9KQG9 NADH dehydrogenase (Quinone) n=6 Tax=Clostridial... 296 8e-79 UniRef50_B9KZ80 NAD-dependent formate dehydrogenase beta subunit... 296 8e-79 UniRef50_D1CCD0 NADH dehydrogenase (Quinone) n=1 Tax=Thermobacul... 296 1e-78 UniRef50_D1C356 NADH dehydrogenase (Quinone) n=1 Tax=Sphaerobact... 296 2e-78 UniRef50_B2V6E9 NADH dehydrogenase (Quinone) n=18 Tax=Bacteria R... 292 2e-77 UniRef50_A8ERL2 NADH-quinone oxidoreductase, F subunit n=2 Tax=C... 290 7e-77 UniRef50_A9BV38 Respiratory-chain NADH dehydrogenase domain 51 k... 288 4e-76 UniRef50_C9KNE8 Protein HymB n=2 Tax=Veillonellaceae RepID=C9KNE... 286 7e-76 UniRef50_B8D1I1 NADH dehydrogenase I subunit F n=2 Tax=Bacteria ... 286 9e-76 UniRef50_D2PS76 Respiratory-chain NADH dehydrogenase domain 51 k... 286 1e-75 UniRef50_Q47HE6 NADH dehydrogenase (Ubiquinone), 24 kDa subunit:... 286 2e-75 UniRef50_B1Y7Y8 Respiratory-chain NADH dehydrogenase domain 51 k... 283 7e-75 UniRef50_C4LEV2 Respiratory-chain NADH dehydrogenase domain 51 k... 281 4e-74 UniRef50_C8QXK3 NADH dehydrogenase (Quinone) n=1 Tax=Desulfurivi... 278 4e-73 UniRef50_Q2SQP5 NADH:ubiquinone oxidoreductase, NADH-binding (51... 271 4e-71 UniRef50_C0X553 NADH dehydrogenase (Quinone) n=24 Tax=Firmicutes... 266 9e-70 UniRef50_D1N816 NADH dehydrogenase (Quinone) n=1 Tax=Victivallis... 266 1e-69 UniRef50_A7IMB3 NADH dehydrogenase (Quinone) n=15 Tax=Proteobact... 265 3e-69 UniRef50_B6K7D1 NADH-quinone oxidoreductase subunit F n=1 Tax=Sc... 261 3e-68 UniRef50_B4Q4H9 GD22602 n=4 Tax=Coelomata RepID=B4Q4H9_DROSI 258 4e-67 UniRef50_B8ERX4 Respiratory-chain NADH dehydrogenase domain 51 k... 256 1e-66 UniRef50_Q1V283 NAD-dependent formate dehydrogenase beta subunit... 256 2e-66 UniRef50_A6GJI0 Putative NADH dehydrogenase I chain F n=1 Tax=Pl... 253 1e-65 UniRef50_Q1QYV5 NADH dehydrogenase (Quinone) n=66 Tax=Proteobact... 251 3e-65 UniRef50_A1SU84 Hydrogenase, NADP-reducing subunit C n=1 Tax=Psy... 251 4e-65 UniRef50_P22317 NAD-reducing hydrogenase hoxS subunit alpha n=5 ... 251 5e-65 UniRef50_B1CAU2 Putative uncharacterized protein n=1 Tax=Anaerof... 249 2e-64 UniRef50_A3EW61 NADH dehydrogenase (Quinone) n=3 Tax=Bacteria Re... 246 2e-63 UniRef50_D0IAF4 NAD-reducing hydrogenase hoxS subunit alpha n=1 ... 244 4e-63 UniRef50_A1Z9Z7 CG8102, isoform A n=7 Tax=melanogaster subgroup ... 240 6e-62 UniRef50_UPI0001AF5A30 NADH dehydrogenase I subunit F n=1 Tax=Ps... 238 3e-61 UniRef50_A2DV30 Respiratory-chain NADH dehydrogenase 51 Kd subun... 238 4e-61 UniRef50_A0K164 NADH dehydrogenase (Quinone) n=2 Tax=Actinomycet... 237 7e-61 UniRef50_C6I0C0 NADH dehydrogenase (Quinone) n=1 Tax=Leptospiril... 235 3e-60 UniRef50_A1WBG0 NADH dehydrogenase (Quinone) n=11 Tax=Proteobact... 233 1e-59 UniRef50_B9MEW2 Respiratory-chain NADH dehydrogenase domain 51 k... 228 3e-58 UniRef50_UPI0000384AE3 COG1894: NADH:ubiquinone oxidoreductase, ... 226 9e-58 UniRef50_O94500 NADH-ubiquinone oxidoreductase 51 kDa subunit, m... 218 3e-55 UniRef50_Q293C9 GA20825 n=4 Tax=Drosophila RepID=Q293C9_DROPS 213 9e-54 UniRef50_B2UIT6 NADH dehydrogenase (Quinone) n=6 Tax=Betaproteob... 211 4e-53 UniRef50_Q1PZQ6 Similar to NADH dehydrogenase I chain F (1st mod... 189 1e-46 UniRef50_D1C1S2 NADH dehydrogenase (Quinone) n=1 Tax=Sphaerobact... 183 9e-45 UniRef50_UPI00016C4299 NADH dehydrogenase (quinone) n=1 Tax=Gemm... 177 8e-43 UniRef50_B4K2N7 GH25296 n=4 Tax=Coelomata RepID=B4K2N7_DROGR 172 2e-41 UniRef50_Q67JR5 NADH dehydrogenase subunit n=1 Tax=Symbiobacteri... 168 3e-40 UniRef50_C3JHP2 Respiratory-chain NADH dehydrogenase domain, 51 ... 168 4e-40 UniRef50_Q51696 Putative uncharacterized protein ORF2 n=1 Tax=Br... 165 3e-39 UniRef50_A5X3H0 HtxX n=1 Tax=Xanthobacter flavus RepID=A5X3H0_XANFL 154 5e-36 UniRef50_B9BGV0 NAD-dependent formate dehydrogenase beta subunit... 139 2e-31 UniRef50_UPI0001A42CCF NADH dehydrogenase I subunit F n=2 Tax=En... 135 3e-30 UniRef50_O96948 Hydrogenase (Fragment) n=72 Tax=root RepID=O9694... 133 1e-29 UniRef50_C1IC09 Respiratory-chain NADH dehydrogenase n=2 Tax=Str... 130 1e-28 UniRef50_B2HFH1 NADH dehydrogenase I (Chain F) (NADH-ubiquinone ... 128 4e-28 UniRef50_Q2J9U3 Respiratory-chain NADH dehydrogenase domain, 51 ... 123 1e-26 UniRef50_B1CC51 Putative uncharacterized protein n=1 Tax=Anaerof... 117 1e-24 UniRef50_C7LYX8 Respiratory-chain NADH dehydrogenase domain 51 k... 109 2e-22 UniRef50_Q18DS5 NAD-reducing hydrogenase, alpha subunit n=1 Tax=... 109 2e-22 UniRef50_A6LZW7 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 106 2e-21 UniRef50_C7Q9V1 Respiratory-chain NADH dehydrogenase domain 51 k... 102 2e-20 UniRef50_A1SNE6 Respiratory-chain NADH dehydrogenase domain, 51 ... 102 4e-20 UniRef50_UPI0001B56646 respiratory-chain NADH dehydrogenase doma... 100 8e-20 UniRef50_D2RYM8 Respiratory-chain NADH dehydrogenase domain 51 k... 100 1e-19 UniRef50_B4V5Q7 Oxidoreductase n=1 Tax=Streptomyces sp. Mg1 RepI... 99 5e-19 UniRef50_A1SQ39 Respiratory-chain NADH dehydrogenase domain, 51 ... 96 3e-18 UniRef50_C4RMV1 Oxidoreductase (Fragment) n=6 Tax=Actinomycetale... 95 6e-18 UniRef50_D1A5I5 NADH dehydrogenase (Quinone) n=2 Tax=Actinomycet... 94 1e-17 UniRef50_B2CIR6 NADH:ubiquinone oxidoreductase NADH-binding 51kD... 92 5e-17 UniRef50_B5HXD6 Oxidoreductase n=2 Tax=Streptomyces RepID=B5HXD6... 88 7e-16 UniRef50_C8XFQ0 Respiratory-chain NADH dehydrogenase domain 51 k... 87 9e-16 UniRef50_C0R1F3 DH dehydrogenase n=3 Tax=Brachyspira RepID=C0R1F... 86 3e-15 UniRef50_C1V5Z7 NADH dehydrogenase subunit F n=1 Tax=Halogeometr... 84 1e-14 UniRef50_D2S0Q1 NADH ubiquinone oxidoreductase, F subunit, iron ... 82 5e-14 UniRef50_Q5V638 Putative NADH dehydrogenase I, F subunit n=1 Tax... 79 4e-13 UniRef50_A9SZ52 Predicted protein n=1 Tax=Physcomitrella patens ... 76 2e-12 UniRef50_D2S0T7 Respiratory-chain NADH dehydrogenase domain 51 k... 72 4e-11 UniRef50_A7BY78 Electron transport complex protein rnfC n=4 Tax=... 69 3e-10 UniRef50_D1N841 Electron transport complex, RnfABCDGE type, C su... 68 5e-10 UniRef50_D1HKS5 Whole genome shotgun sequence of line PN40024, s... 68 5e-10 UniRef50_A5ZMX0 Putative uncharacterized protein n=2 Tax=Clostri... 67 1e-09 UniRef50_D1PFH3 Electron transport complex, RnfABCDGE type, C su... 67 2e-09 UniRef50_B1KU48 Respiratory-chain NADH dehydrogenase family prot... 66 3e-09 UniRef50_B0S407 Electron transport complex protein n=2 Tax=Fineg... 65 5e-09 UniRef50_C7HT97 Na(+)-translocating NADH-quinone reductase, A su... 65 6e-09 UniRef50_C6SE09 Respiratory-chain NADH dehydrogenase, 51 kDa sub... 65 7e-09 UniRef50_C9M8J9 Electron transport complex, RnfABCDGE type, C su... 64 1e-08 UniRef50_C6L993 Na(+)-translocating NADH-quinone reductase, A su... 64 1e-08 UniRef50_C0AVA8 Putative uncharacterized protein n=1 Tax=Proteus... 64 1e-08 UniRef50_B0K144 Electron transport complex, RnfABCDGE type, C su... 63 2e-08 UniRef50_A5N6F8 NADH dehydrogenase-related protein n=2 Tax=Clost... 63 2e-08 UniRef50_D2ML02 NADH-quinone oxidoreductase, F subunit (Fragment... 62 6e-08 UniRef50_C0QFQ4 RnfC1 n=1 Tax=Desulfobacterium autotrophicum HRM... 60 2e-07 UniRef50_A8SLB1 Putative uncharacterized protein n=1 Tax=Parvimo... 60 2e-07 UniRef50_Q7XZ61 NADH dehydrogenase (Fragment) n=1 Tax=Griffithsi... 60 2e-07 UniRef50_A9KN64 Respiratory-chain NADH dehydrogenase domain 51 k... 59 3e-07 UniRef50_C9NKP5 Oxidoreductase (Fragment) n=9 Tax=Streptomyces R... 58 9e-07 UniRef50_Q603B2 Electron transport complex, C subunit n=1 Tax=Me... 57 1e-06 UniRef50_C4FA62 Putative uncharacterized protein n=2 Tax=Collins... 57 1e-06 UniRef50_A9NEB0 NADH oxidoreductase complex RnfABCDGE type, C su... 56 2e-06 UniRef50_Q67R12 Na+-transporting NADH-quinone reductase subunit ... 56 3e-06 UniRef50_Q3A1L5 Pyridine nucleotide-disulphide oxidoreductase n=... 55 4e-06 UniRef50_Q8RIJ6 Nitrogen fixation iron-sulphur protein RNFC n=17... 55 6e-06 UniRef50_Q6AIR8 Related to propanediol utilization protein (PduS... 55 6e-06 UniRef50_C9R993 Methyl-viologen-reducing hydrogenase delta subun... 55 6e-06 UniRef50_D2RN96 Electron transport complex, RnfABCDGE type, C su... 55 7e-06 UniRef50_B5JW06 EleCtron transport complex, rnfabcdge type, c su... 55 7e-06 UniRef50_Q0PIB6 Ethanolamine utilization Fe-S center protein eut... 55 8e-06 UniRef50_A5HYR2 Electron transport complex protein n=37 Tax=Bact... 54 8e-06 UniRef50_A1WT48 Electron transport complex, RnfABCDGE type, C su... 54 9e-06 UniRef50_B6BWH5 Electron transport complex protein RnfC n=2 Tax=... 54 1e-05 UniRef50_A1TZ63 Electron transport complex, RnfABCDGE type, C su... 54 1e-05 UniRef50_C0WAW3 Electron transport complex protein n=1 Tax=Acida... 54 2e-05 UniRef50_Q73PG1 Na(+)-translocating NADH-quinone reductase, A su... 53 3e-05 UniRef50_B2A1V2 Electron transport complex, RnfABCDGE type, C su... 53 3e-05 UniRef50_C9XNL2 Electron transport complex protein n=7 Tax=Clost... 52 3e-05 UniRef50_B1ZMR0 Respiratory-chain NADH dehydrogenase domain 51 k... 52 4e-05 UniRef50_Q1K3H5 FAD-dependent pyridine nucleotide-disulphide oxi... 52 5e-05 UniRef50_C4LFE2 Respiratory-chain NADH dehydrogenase domain 51 k... 52 5e-05 UniRef50_C9A8J9 Respiratory-chain NADH dehydrogenase 51 kDa subu... 51 7e-05 UniRef50_A5N7M5 RnfC n=6 Tax=Clostridiales RepID=A5N7M5_CLOK5 51 8e-05 UniRef50_Q52716 Electron transport complex protein rnfC n=9 Tax=... 51 9e-05 UniRef50_C4Z9G3 RnfC/nqrF n=16 Tax=Bacteria RepID=C4Z9G3_EUBR3 50 1e-04 UniRef50_A0L5G6 Electron transport complex, RnfABCDGE type, C su... 50 2e-04 UniRef50_Q21I18 Serine/threonine protein kinase n=1 Tax=Saccharo... 50 2e-04 UniRef50_D1AJ84 Respiratory-chain NADH dehydrogenase domain 51 k... 50 2e-04 UniRef50_A8AH10 Electron transport complex protein rnfC n=6 Tax=... 50 2e-04 UniRef50_Q65UM2 GltD protein n=9 Tax=Bacteria RepID=Q65UM2_MANSM 50 3e-04 UniRef50_Q0TQI8 Electron transport complex, RnfABCDGE type, C su... 50 3e-04 UniRef50_Q5LC48 Electron transport complex protein n=41 Tax=Bact... 49 3e-04 UniRef50_D1Y5V9 Electron transport complex protein RnfC n=1 Tax=... 49 5e-04 UniRef50_Q31GU4 NADH oxidoreductase, RnfABCDGE type, C subunit n... 48 6e-04 UniRef50_B2A142 Electron transport complex, RnfABCDGE type, C su... 48 7e-04 UniRef50_A0AHN6 Complete genome n=18 Tax=Listeria RepID=A0AHN6_L... 48 8e-04 UniRef50_A1WTR7 Electron transport complex, RnfABCDGE type, C su... 48 8e-04 UniRef50_A0LLS5 Electron transport complex, RnfABCDGE type, C su... 48 9e-04 UniRef50_B8J118 FAD-dependent pyridine nucleotide-disulphide oxi... 48 9e-04 UniRef50_A5N6H2 RnfC related NADH dehydrogenase n=2 Tax=Clostrid... 48 0.001 UniRef50_A4SEA3 Electron transport complex, RnfABCDGE type, C su... 48 0.001 UniRef50_B2TM76 Periplasmic [Fe] hydrogenase 1 n=14 Tax=Bacteria... 47 0.001 UniRef50_C7RDT7 Electron transport complex, RnfABCDGE type, C su... 47 0.001 UniRef50_Q65U33 Electron transport complex protein rnfC n=29 Tax... 47 0.001 UniRef50_C6QID3 Putative uncharacterized protein n=1 Tax=Hyphomi... 47 0.001 UniRef50_B5JR42 Electron transport complex, RnfABCDGE type, C su... 47 0.001 UniRef50_D0D1S7 EleCtron transport complex, rnfabcdge type, c su... 47 0.001 UniRef50_C9LBM9 Na(+)-translocating NADH-quinone reductase, A su... 47 0.001 UniRef50_A5EVI2 Electron transport complex protein, C subunit n=... 46 0.002 UniRef50_A1HS10 FAD dependent oxidoreductase n=1 Tax=Thermosinus... 46 0.003 UniRef50_Q0AAG9 Electron transport complex, RnfABCDGE type, C su... 46 0.003 UniRef50_A5I4Q9 NADH dehydrogenase family protein n=7 Tax=Clostr... 46 0.003 UniRef50_UPI0001BC56BC hydrogenase, Fe-only n=3 Tax=Fusobacteriu... 45 0.005 UniRef50_C6WYE0 Electron transport complex, RnfABCDGE type, C su... 45 0.005 UniRef50_UPI0001698869 electron transport complex, RnfABCDGE typ... 45 0.006 UniRef50_C8WMP9 Electron transport complex, RnfABCDGE type, C su... 45 0.007 UniRef50_C5BT99 Electron transport complex, RnfABCDGE type, C su... 44 0.009 UniRef50_B8FDM6 Respiratory-chain NADH dehydrogenase domain 51 k... 44 0.010 UniRef50_C6LEW4 PduS protein n=3 Tax=Bacteria RepID=C6LEW4_9FIRM 44 0.012 UniRef50_Q0VP39 Electron transport complex protein rnfC n=12 Tax... 44 0.014 UniRef50_C4L9H6 Electron transport complex, RnfABCDGE type, C su... 44 0.014 UniRef50_C9N0M8 Electron transport complex, RnfABCDGE type, C su... 44 0.015 UniRef50_C0R202 Electron transport complex protein n=2 Tax=Brach... 43 0.019 UniRef50_D0L1N5 Electron transport complex, RnfABCDGE type, C su... 43 0.023 UniRef50_B7CAH2 Putative uncharacterized protein n=1 Tax=Eubacte... 43 0.024 UniRef50_A9BJD0 Electron transport complex, RnfABCDGE type, C su... 43 0.026 UniRef50_Q1N6T4 Electron transport complex protein RnfC n=1 Tax=... 43 0.027 UniRef50_Q5P537 Electron transport complex protein rnfC (Nitroge... 43 0.028 UniRef50_C6PYD8 Respiratory-chain NADH dehydrogenase domain 51 k... 42 0.031 UniRef50_B0PD32 Putative uncharacterized protein n=3 Tax=Clostri... 42 0.036 UniRef50_A1AVH8 Electron transport complex, RnfABCDGE type, C su... 42 0.043 UniRef50_UPI0000D54110 formate dehydrogenase, beta subunit n=1 T... 42 0.053 UniRef50_C1DAX3 Possible oxidoreductase n=8 Tax=Proteobacteria R... 42 0.055 UniRef50_Q39R86 FAD-dependent pyridine nucleotide-disulphide oxi... 42 0.057 UniRef50_A6TL21 Respiratory-chain NADH dehydrogenase domain, 51 ... 42 0.061 UniRef50_B8G1Q5 Respiratory-chain NADH dehydrogenase domain 51 k... 42 0.066 >UniRef50_P31979 NADH-quinone oxidoreductase subunit F n=44 Tax=Enterobacteriaceae RepID=NUOF_ECOLI Length = 445 Score = 916 bits (2368), Expect = 0.0, Method: Compositional matrix adjust. Identities = 445/445 (100%), Positives = 445/445 (100%) Query: 1 MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLK 60 MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLK Sbjct: 1 MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLK 60 Query: 61 GRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISA 120 GRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISA Sbjct: 61 GRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISA 120 Query: 121 FALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYIC 180 FALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYIC Sbjct: 121 FALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYIC 180 Query: 181 GEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNIS 240 GEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNIS Sbjct: 181 GEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNIS 240 Query: 241 KSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFL 300 KSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFL Sbjct: 241 KSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFL 300 Query: 301 TEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDG 360 TEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDG Sbjct: 301 TEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDG 360 Query: 361 LPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFE 420 LPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFE Sbjct: 361 LPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFE 420 Query: 421 AGIKQPFSNTHLINGIQPNLLKERW 445 AGIKQPFSNTHLINGIQPNLLKERW Sbjct: 421 AGIKQPFSNTHLINGIQPNLLKERW 445 >UniRef50_Q9I0J7 NADH-quinone oxidoreductase subunit F n=193 Tax=Bacteria RepID=NUOF_PSEAE Length = 448 Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/426 (79%), Positives = 376/426 (88%), Gaps = 3/426 (0%) Query: 4 IIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRG 63 + R+ ETHPLTWRLR+D QPVWL+EY+SK+GY ARKALT ++ D+IV VKD+GLKGRG Sbjct: 12 MARSAETHPLTWRLREDAQPVWLEEYQSKDGYAAARKALTQMAQDDIVQTVKDSGLKGRG 71 Query: 64 GAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFAL 123 GAGF TG+KW LMPKDES+NIRYLLCNADEMEP T+KDR+LMEQLPHLLVEGMLISA AL Sbjct: 72 GAGFPTGVKWGLMPKDESLNIRYLLCNADEMEPNTWKDRMLMEQLPHLLVEGMLISARAL 131 Query: 124 KAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEE 183 KAYRGYIFLRGEY++AA NL RAI EA AGLLGKNI+G+GFDFELFVHTGAGRYICGEE Sbjct: 132 KAYRGYIFLRGEYVDAARNLNRAIDEAKAAGLLGKNILGSGFDFELFVHTGAGRYICGEE 191 Query: 184 TALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISK-- 241 TALINSLEGRRANPRSKPPFPA G WGKPTCVNNVETLCNVPAI+ NGV+WY+ +++ Sbjct: 192 TALINSLEGRRANPRSKPPFPAAVGVWGKPTCVNNVETLCNVPAIVGNGVDWYKTLARPG 251 Query: 242 SKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLT 301 S+D GTKLMGFSG+VKNPGLWELPFG +ARE+ EDYAGGMRDG + KAWQPGGAGT FL Sbjct: 252 SEDMGTKLMGFSGKVKNPGLWELPFGVSARELFEDYAGGMRDGFQLKAWQPGGAGTGFLL 311 Query: 302 EAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGL 361 HLD M I K G+R+GT LAMAVD INMVSL+RN+EEFFARESCGWCTPCRDGL Sbjct: 312 PEHLDAQMFAGGIAKVGTRMGTGLAMAVDDSINMVSLLRNMEEFFARESCGWCTPCRDGL 371 Query: 362 PWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEA 421 PWSVK+LRALERGEGQPGD+ETLEQL FLGPGKTFCAHAPGAVEPL SA+KYFR EFEA Sbjct: 372 PWSVKLLRALERGEGQPGDLETLEQLVNFLGPGKTFCAHAPGAVEPLGSALKYFRAEFEA 431 Query: 422 GI-KQP 426 GI +QP Sbjct: 432 GISRQP 437 >UniRef50_Q608Y1 NADH dehydrogenase I, F subunit n=4 Tax=Gammaproteobacteria RepID=Q608Y1_METCA Length = 427 Score = 531 bits (1368), Expect = e-149, Method: Compositional matrix adjust. Identities = 252/410 (61%), Positives = 317/410 (77%), Gaps = 1/410 (0%) Query: 12 PLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGL 71 PLT ++ D V L EY + GYEG +K L +P ++ +VKD+GL+GRGGAGF TGL Sbjct: 4 PLTRNIKSDGSTVTLAEYLASGGYEGLKKTLAEFAPLDVQQRVKDSGLRGRGGAGFPTGL 63 Query: 72 KWSLMPKDESM-NIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYI 130 KWS +P E +YL+ N DEMEPG +KDRLL+E PH L+EG++I+A+A++A Y+ Sbjct: 64 KWSFVPMGEGAPRTKYLVVNGDEMEPGAFKDRLLLEGDPHQLIEGVVIAAYAIQANIAYV 123 Query: 131 FLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSL 190 FLRGEY AA LR+AIAEA GLLG++I+G+GF +L +HT AGRYICGEETAL+NSL Sbjct: 124 FLRGEYRLAAARLRQAIAEAEAQGLLGEDILGSGFSLDLRLHTSAGRYICGEETALLNSL 183 Query: 191 EGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLM 250 EG+RANPR+KPPFP SG +GKPT VNNVETLCN+P IL NGVEWY+ +S++ + GTK+ Sbjct: 184 EGKRANPRAKPPFPQVSGLFGKPTIVNNVETLCNLPHILRNGVEWYKGLSRTGEPGTKIY 243 Query: 251 GFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPME 310 G SGRV++PG WELP GTTAREI+E++AGGMRDG + K + PGGA TDFL HLD+PM+ Sbjct: 244 GVSGRVRSPGAWELPMGTTAREIIEEHAGGMRDGYRLKGYLPGGASTDFLLPEHLDIPMD 303 Query: 311 FESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRA 370 + SIGKAGSRLGT + +D + V +V NLE FFA+ESCGWCTPCRDGLPW+V +L Sbjct: 304 YGSIGKAGSRLGTGTMILLDDKTCPVQMVLNLERFFAQESCGWCTPCRDGLPWTVSLLEG 363 Query: 371 LERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFE 420 L G G+P D+ETLE+LC LGPG TFCA APGA+EPLQSA+K+FR +FE Sbjct: 364 LIEGRGRPEDLETLERLCGLLGPGNTFCALAPGAMEPLQSALKHFRADFE 413 >UniRef50_A5FXJ6 NADH dehydrogenase (Quinone) n=11 Tax=Proteobacteria RepID=A5FXJ6_ACICJ Length = 434 Score = 463 bits (1192), Expect = e-129, Method: Compositional matrix adjust. Identities = 227/422 (53%), Positives = 298/422 (70%), Gaps = 3/422 (0%) Query: 12 PLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGL 71 PLT ++ +QP+ + Y GY RKA G+SP+ +V +VK A ++GRGGAGF G Sbjct: 7 PLTSYIQPGRQPLDIAGYERAGGYAAMRKAF-GMSPESVVEEVKRAKVRGRGGAGFPAGR 65 Query: 72 KWSLMPKD-ESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYI 130 KW P+ ++ RYL+ NADEMEPG++KDRLL+E PHL++EG++I AFA++A YI Sbjct: 66 KWEGAPRGADAPRHRYLVINADEMEPGSFKDRLLLEAAPHLMIEGIIIGAFAVQAETAYI 125 Query: 131 FLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSL 190 F+RGEY+ A L RA+AEA G LG +I+G+GF + VH GRYICGE +AL ++L Sbjct: 126 FVRGEYVLAMERLSRAVAEAEARGYLGADILGSGFSLTIHVHGSGGRYICGEASALFSAL 185 Query: 191 EGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKS-KDAGTKL 249 EG+RA PR++PP TSG WGKPT VNNVETLC VP+I+ G +W+ +S+S + GTKL Sbjct: 186 EGKRAVPRTRPPRSTTSGLWGKPTVVNNVETLCCVPSIIERGADWFLGLSRSATEGGTKL 245 Query: 250 MGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPM 309 G SGRV PGLWELP GT EI+E++AGGMR+G + +A PGGA T F+ + D+PM Sbjct: 246 YGVSGRVNRPGLWELPVGTPLNEIIEEHAGGMREGYEARAVLPGGASTAFIMRENFDVPM 305 Query: 310 EFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILR 369 +F+S+GK GS LGTA + +D + V L+RN+E FFA+ESCGWCTPCRDGLPW +IL Sbjct: 306 DFDSVGKIGSWLGTANILVLDQKRCPVGLLRNIEHFFAQESCGWCTPCRDGLPWVERILT 365 Query: 370 ALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSN 429 ALE GEG+P DIE L FLGPG+TFC APGA+ PL+S +K+FREEFE + + Sbjct: 366 ALEAGEGEPDDIELLAHHVDFLGPGRTFCDLAPGAMAPLRSGLKFFREEFERHVSERHCP 425 Query: 430 TH 431 H Sbjct: 426 WH 427 >UniRef50_Q20Z43 NADH dehydrogenase (Quinone) n=2 Tax=Rhodopseudomonas palustris RepID=Q20Z43_RHOPB Length = 428 Score = 421 bits (1081), Expect = e-116, Method: Compositional matrix adjust. Identities = 215/414 (51%), Positives = 275/414 (66%), Gaps = 5/414 (1%) Query: 12 PLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGL 71 PLT R + ++P E++ GY+ R AL SPD +V V+D+GL+GRGGAGF TG Sbjct: 5 PLTGRAQPGREPHRFAEWQRLGGYDALRGALQRHSPDALVTIVEDSGLRGRGGAGFLTGT 64 Query: 72 KWSLMPKDESM---NIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRG 128 KW LM K RYL N DEMEPG++KDRLLME LPH L+EG +++A+A+ A Sbjct: 65 KWRLMRKAAEAAGDGPRYLCVNGDEMEPGSFKDRLLMEALPHQLIEGAMLAAYAIGATEV 124 Query: 129 YIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALIN 188 I +R Y AAV L RAI EA AGLLG+NI+G+GF ++ +HT AGRYI GEETALI Sbjct: 125 IILVRDAYRAAAVALTRAITEAESAGLLGRNILGSGFGLKMRLHTSAGRYIVGEETALIA 184 Query: 189 SLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTK 248 ++EG R PR +PP+PA SG WG+PT VNNVETL VP I+ NG EW+Q +S++ + GTK Sbjct: 185 AIEGERPVPRHRPPYPAQSGLWGRPTTVNNVETLSAVPHIVQNGAEWFQGLSRTAEGGTK 244 Query: 249 LMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLP 308 L G SGRV P L E P GT A E++E AGG+RDG K A+QPGG T FL EA LD+P Sbjct: 245 LYGISGRVARPQLIEAPMGTPAGELIE-MAGGIRDGRKLLAFQPGGGATAFLQEAELDVP 303 Query: 309 MEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKIL 368 M+F + KAGS LGT + +D + V+ + F+ARESCG CTPCRDGLPW K+L Sbjct: 304 MDFAHVKKAGSSLGTGAVIVLDDQSCPVAAIGRHARFYARESCGLCTPCRDGLPWVAKLL 363 Query: 369 RALERGEGQPGDIETLEQLCRFLGP-GKTFCAHAPGAVEPLQSAIKYFREEFEA 421 ALE G G+P DI+ L GP G++FC GA+ P++S ++ F + F A Sbjct: 364 DALEAGHGKPEDIDLLHMHVELAGPSGRSFCDLMAGAMTPVKSGLERFGDIFAA 417 >UniRef50_A5GD11 NADH dehydrogenase (Quinone) n=6 Tax=Deltaproteobacteria RepID=A5GD11_GEOUR Length = 433 Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust. Identities = 210/409 (51%), Positives = 278/409 (67%), Gaps = 7/409 (1%) Query: 24 VWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMN 83 V EY + G++ +KAL LSP+++ V DA L+GRGGAGF TG KWS +P+D Sbjct: 24 VTFTEYCGEGGFDALKKALKELSPNDVQQLVIDANLRGRGGAGFPTGKKWSFVPRDLP-G 82 Query: 84 IRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNL 143 R+L+CN DEMEPGTYKDR+L+E P LVEG++++ +A+ +IF+R Y AA N+ Sbjct: 83 PRWLICNCDEMEPGTYKDRVLLEANPWSLVEGIILACYAIGVSHAFIFIRRGYETAAGNV 142 Query: 144 RRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPF 203 RRAIAEA AGL+G NI+G+GF ++ +H AGRYICGEETAL+N+LEG+RANPRSKPPF Sbjct: 143 RRAIAEAKGAGLIGDNILGSGFSCDIDLHVSAGRYICGEETALMNALEGKRANPRSKPPF 202 Query: 204 PATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKD-AGTKLMGFSGRVKNPGLW 262 PA G WG PT VNNVETL N+P I+ANG W++ ++K + AGTKL SG V+N Sbjct: 203 PAVKGLWGGPTVVNNVETLANIPYIIANGPAWFKGLAKIPEAAGTKLFCISGHVQNTVCM 262 Query: 263 ELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLG 322 ELP G +I++ GGM G +FKA PGGA T F TE H +PM+F+++ KAGSRLG Sbjct: 263 ELPLGMPLGDIIDGPCGGMLPGKRFKACIPGGASTPFFTEEHRGVPMDFDTVAKAGSRLG 322 Query: 323 TALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIE 382 T + D E +V NL +F+ARESCGWCTPCR+GLP+ V +L LE G+G+ DI+ Sbjct: 323 TGGIIVFDEETCLVGATLNLVKFYARESCGWCTPCREGLPFVVDVLARLEAGKGETEDID 382 Query: 383 TLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGI---KQPFS 428 L + ++L FCA APGA+ P++ ++ F EE I + PFS Sbjct: 383 ILREHVKYL--NLAFCALAPGAMGPVEGLLRLFEEEIREHIIKRRCPFS 429 >UniRef50_D0LDB1 NADH-quinone oxidoreductase, F subunit n=45 Tax=Bacteria RepID=D0LDB1_GORB4 Length = 706 Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust. Identities = 200/424 (47%), Positives = 274/424 (64%), Gaps = 7/424 (1%) Query: 8 PETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGF 67 PET P+ R + LD Y NGY+G RKAL PD+I+ +K +GL+GRGGAGF Sbjct: 269 PETIPVLSRHWQEPDSWTLDNYLQHNGYQGLRKALD-TPPDDIIELIKASGLRGRGGAGF 327 Query: 68 STGLKWSLMPKDESMNI--RYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKA 125 G+KWS +P+ + + YL+ NADE EPGT KD LM PH LVEG++I+A+A++A Sbjct: 328 PVGMKWSFIPQSDDPDAPPHYLVVNADESEPGTCKDMPLMLASPHSLVEGVIIAAYAIRA 387 Query: 126 YRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETA 185 + +I++RGE LR A+ +A AG LG++I+G+GFD EL VH GAG YICGEETA Sbjct: 388 HHAFIYVRGEVASVIRRLRTAVDDAYAAGYLGRDILGSGFDLELVVHAGAGAYICGEETA 447 Query: 186 LINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDA 245 L++SLEGRR PR +PPFPA +G + PT VNNVE++ +VP I+ NGV+W++++ K Sbjct: 448 LLDSLEGRRGQPRLRPPFPAVAGLYASPTVVNNVESIASVPPIIRNGVDWFRSMGTEKSP 507 Query: 246 GTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHL 305 G L SG V+ PG +E G T RE+L D AGG+R G + K W PGG+ T LT HL Sbjct: 508 GFTLYSLSGHVERPGQYEAALGVTLRELL-DRAGGVRAGHQLKFWTPGGSSTPLLTAEHL 566 Query: 306 DLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSV 365 D+P+++E +G AGS LGT D +V V +F+A ESCG CTPCR+G W V Sbjct: 567 DVPLDYEGVGAAGSMLGTKALQIFDETTCVVGAVLRWTQFYAHESCGKCTPCREGTYWLV 626 Query: 366 KILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 ++L+ LE G D++TL + + GK+FCA GA P+ S++KYFR+E++A + Sbjct: 627 QLLKRLETEGGTTADLDTLADVTNSI-VGKSFCALGDGAGSPIVSSLKYFRDEYDAHLAS 685 Query: 426 --PF 427 PF Sbjct: 686 GCPF 689 >UniRef50_Q9RU92 NADH dehydrogenase I, F subunit n=1 Tax=Deinococcus radiodurans RepID=Q9RU92_DEIRA Length = 444 Score = 393 bits (1010), Expect = e-108, Method: Compositional matrix adjust. Identities = 202/399 (50%), Positives = 264/399 (66%), Gaps = 8/399 (2%) Query: 26 LDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIR 85 LD Y+ GY+G R+A L PD ++ +VK +GL+GRGGAGF+TGLKWS MP ++ Sbjct: 34 LDTYQRGGGYQGVRRAFA-LGPDAVIEEVKKSGLRGRGGAGFATGLKWSFMPLNDG-KPH 91 Query: 86 YLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRR 145 ++CNADE EPGT+KDR LM + PH L+EGMLI +A++A RGYI++RGEY+ AA L Sbjct: 92 LIICNADESEPGTFKDRYLMSEDPHQLIEGMLIGGYAMRASRGYIYIRGEYVLAAERLWA 151 Query: 146 AIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPA 205 AI EA AGLLGK+I+G+GFDF+L VH GAG YICGEETAL+NSLEG RANPR KPPFPA Sbjct: 152 AIHEARAAGLLGKDILGSGFDFDLQVHRGAGAYICGEETALMNSLEGLRANPRLKPPFPA 211 Query: 206 TSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELP 265 +G +G PT +NNVET C IL G +W+ + K G KL SG V PG++ELP Sbjct: 212 AAGLYGLPTTINNVETFCAATHILKYGADWHAGMGTEKSKGMKLFQISGPVARPGVYELP 271 Query: 266 FGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFL--TEAHLDLPMEFESIGKAGSRLGT 323 GT RE++ D+AGG + KA PGG L +E LD PM++ES+ AGS LGT Sbjct: 272 LGTPFRELIYDWAGGPTE--DIKAIIPGGISCQLLKWSEDILDTPMDYESLAAAGSSLGT 329 Query: 324 ALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLP-WSVKILRALERGEGQPGDIE 382 + ++V N F+ ESCG CTPCR+G+ W V++ L RG GQPGD Sbjct: 330 GGVTLIPAAASIVDTTWNAVRFYGHESCGKCTPCREGISGWMVRMYEKLARGHGQPGDTN 389 Query: 383 TLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEA 421 + + +G G++FCA A + P+ S+I+ FREE++A Sbjct: 390 LILDMADNIG-GRSFCALADACLGPVLSSIRLFREEYDA 427 >UniRef50_Q9XAQ9 NADH-quinone oxidoreductase subunit F n=56 Tax=Bacteria RepID=NUOF_STRCO Length = 449 Score = 392 bits (1008), Expect = e-108, Method: Compositional matrix adjust. Identities = 195/412 (47%), Positives = 268/412 (65%), Gaps = 4/412 (0%) Query: 12 PLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGL 71 P+ D+ + LD YR GYEG RKAL ++PD+++ VK++GL+GRGGAGF TG+ Sbjct: 19 PVLSAFWDEDESWTLDVYRRHEGYEGLRKALA-MAPDDLIAYVKESGLRGRGGAGFPTGM 77 Query: 72 KWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIF 131 KW +P+ + YL+ NADE EPGT KD L+ PH L+EG++I+ +A+++ +I+ Sbjct: 78 KWQFIPQGDG-KPHYLVVNADESEPGTCKDIPLLFANPHSLIEGIVIACYAIRSSHAFIY 136 Query: 132 LRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLE 191 LRGE + L A+ EA AG LG+NI+G+G D L VH GAG YICGEETAL++SLE Sbjct: 137 LRGEVVPVLRRLHEAVREAYAAGFLGENILGSGLDLTLTVHAGAGAYICGEETALLDSLE 196 Query: 192 GRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMG 251 GRR PR +PPFPA +G + PT VNNVE++ +VPAIL G +W++++ K G L Sbjct: 197 GRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPAILNKGKDWFRSMGSEKSPGFTLYS 256 Query: 252 FSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEF 311 SG V PG +E P G T R++L D +GGMR G + K W PGG+ T T+ HLD+P+++ Sbjct: 257 LSGHVAGPGQYEAPLGITLRQLL-DMSGGMRPGHRLKFWTPGGSSTPMFTDEHLDVPLDY 315 Query: 312 ESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRAL 371 E +G AGS LGT D +V V EF+A ESCG CTPCR+G W V++LR + Sbjct: 316 EGVGAAGSMLGTKALQCFDETTCVVRAVTRWTEFYAHESCGKCTPCREGTYWLVQLLRDI 375 Query: 372 ERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGI 423 E G+GQ D++ L + + GK+FCA GA P+ S++KYFREE+E I Sbjct: 376 EAGKGQMSDLDKLNDIADNIN-GKSFCALGDGAASPIFSSLKYFREEYEEHI 426 >UniRef50_Q56222 NADH-quinone oxidoreductase subunit 1 n=16 Tax=Bacteria RepID=NQO1_THET8 Length = 438 Score = 391 bits (1005), Expect = e-107, Method: Compositional matrix adjust. Identities = 199/405 (49%), Positives = 274/405 (67%), Gaps = 8/405 (1%) Query: 21 KQPVW-LDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKD 79 K+ W LD Y GYE A++ L +PDE++ +VK +GL+GRGGAGF TGLKWS MPKD Sbjct: 23 KEGSWTLDYYLRHGGYETAKRVLKEKTPDEVIEEVKRSGLRGRGGAGFPTGLKWSFMPKD 82 Query: 80 ESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEA 139 + YL+CNADE EPG++KDR ++E +PHLL+EGM+++ +A++A GYI++RGEY A Sbjct: 83 DGKQ-HYLICNADESEPGSFKDRYILEDVPHLLIEGMILAGYAIRATVGYIYVRGEYRRA 141 Query: 140 AVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRS 199 A L +AI EA G LGKN+ GT F F+L VH GAG YICGEETAL+NSLEG RANPR Sbjct: 142 ADRLEQAIKEARARGYLGKNLFGTDFSFDLHVHRGAGAYICGEETALMNSLEGLRANPRL 201 Query: 200 KPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNP 259 KPPFPA SG WGKPT +NNVETL +V I+ G +W+ + + G KL SG VK P Sbjct: 202 KPPFPAQSGLWGKPTTINNVETLASVVPIMERGADWFAQMGTEQSKGMKLYQISGPVKRP 261 Query: 260 GLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFL--TEAHLDLPMEFESIGKA 317 G++ELP GTT RE++ ++AGG + + +A PGG+ T L TE LD PM +E + Sbjct: 262 GVYELPMGTTFRELIYEWAGGPLEPI--QAIIPGGSSTPPLPFTEEVLDTPMSYEHLQAK 319 Query: 318 GSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLP-WSVKILRALERGEG 376 GS LGT + + ++MV + NL F+A ESCG CTPCR+G+ + V + + G+G Sbjct: 320 GSMLGTGGVILIPERVSMVDAMWNLTRFYAHESCGKCTPCREGVAGFMVNLFAKIGTGQG 379 Query: 377 QPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEA 421 + D+E LE L + G++FC A AV P++ ++++F++++ A Sbjct: 380 EEKDVENLEALLPLI-EGRSFCPLADAAVWPVKGSLRHFKDQYLA 423 >UniRef50_A6FCN1 NuoF2 NADH I CHAIN F n=1 Tax=Moritella sp. PE36 RepID=A6FCN1_9GAMM Length = 425 Score = 387 bits (993), Expect = e-106, Method: Compositional matrix adjust. Identities = 191/400 (47%), Positives = 264/400 (66%), Gaps = 3/400 (0%) Query: 26 LDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIR 85 ++ Y GY+G +K LT SPD++++ VK + L+GRGGAGF TGLKWS +PKD+ I Sbjct: 18 IEFYEKTGGYQGLKKILTTYSPDKVIDAVKASNLRGRGGAGFPTGLKWSFVPKDDG-KIH 76 Query: 86 YLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRR 145 YL CNADE EPGT+KDRLLME+ PH ++EGM+I+A+A++A YI++RGEY + + + Sbjct: 77 YLCCNADEGEPGTFKDRLLMERDPHRVIEGMIIAAYAIRAEVAYIYIRGEYGLSIDMITQ 136 Query: 146 AIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPA 205 AI A G LGKNI T F ++VH GAG YICGEETAL+ S+EGRR P+ KPPFPA Sbjct: 137 AIKAAYAKGYLGKNIFNTDFCLNIYVHKGAGAYICGEETALLESIEGRRGQPKLKPPFPA 196 Query: 206 TSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELP 265 SG + PT +NNVET V I A GV+W+ +I G +L G SG+++NPG+ ELP Sbjct: 197 VSGLYDCPTVINNVETFVCVTHIFAKGVDWFTSIGPDDAPGPRLFGLSGQLQNPGIVELP 256 Query: 266 FGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTAL 325 G E++ DY GG G KFKA PGG + A LD+ M F + A S +G+A Sbjct: 257 MGLPLSELVYDYGGGPLTG-KFKAVIPGGLSAPMIPLAGLDVKMNFADLATADSMMGSAA 315 Query: 326 AMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLE 385 +A+D ++ ++ R + EFF+ ESCG C PCR+GLPW+ KIL +E G+G+PGD+E L+ Sbjct: 316 VIALDETASIPAVGRRIAEFFSHESCGKCAPCREGLPWASKILNRIESGQGRPGDLEQLQ 375 Query: 386 QLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 +C + +FCA GA +++ +K+F E++A I Q Sbjct: 376 VICGGVF-NNSFCALGVGAAWAIRATLKHFPHEYDALITQ 414 >UniRef50_Q6MDR1 Probable NADH-ubiquinone oxidoreductase chain F n=2 Tax=Parachlamydiaceae RepID=Q6MDR1_PARUW Length = 432 Score = 380 bits (977), Expect = e-104, Method: Compositional matrix adjust. Identities = 195/405 (48%), Positives = 264/405 (65%), Gaps = 3/405 (0%) Query: 19 DDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPK 78 DD ++ Y GY+ +KA++ +S D+++ VK + L+GRGG GF TGLKWS +PK Sbjct: 12 DDPHQCKIETYERNGGYQALKKAISSISSDQLIEMVKQSWLRGRGGGGFQTGLKWSFVPK 71 Query: 79 DESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIE 138 D ++ +YL+CN DE EPGT+KDR ++E PH L+EG++++ +A+ A + +I+ RGE+ E Sbjct: 72 DCQIS-KYLVCNCDESEPGTFKDRYIIENDPHQLIEGIILACYAIGAKQAFIYCRGEFFE 130 Query: 139 AAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPR 198 LR AI EA + G L + F + VH GAG YI GEETA +NSLEG RA PR Sbjct: 131 GNKKLRLAIQEAKKRGYLEAPLGEANFSVSIIVHPGAGAYIAGEETAQLNSLEGYRATPR 190 Query: 199 SKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKN 258 KPPFPA SG + KPT VNNVETLCNV I+ GVEWYQ+I K K+ GTK+ SG V+N Sbjct: 191 LKPPFPAVSGLYEKPTVVNNVETLCNVVHIVNRGVEWYQSIGKPKNTGTKIFQVSGHVQN 250 Query: 259 PGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAG 318 PG +E P G +E+LE AG M G +FKA PGG+ LTE LD PM+F+S+ Sbjct: 251 PGCFEFPLGIPLKEVLER-AGWMLPGHQFKACYPGGSSCSLLTERDLDTPMDFDSVAAKK 309 Query: 319 SRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQP 378 S LGTA + +D +MV + L EF+ ESCG CTPCR+G W+ +IL + G G Sbjct: 310 SMLGTASIIVMDDSTDMVKVANRLMEFYQNESCGKCTPCREGTRWTKQILTRILAGRGTV 369 Query: 379 GDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGI 423 GD++T+E++C+ + +FC APGA P+ SAI+ FR EFE+ I Sbjct: 370 GDLKTIERICQQM-EMDSFCPLAPGAALPIVSAIREFRGEFESYI 413 >UniRef50_A7NPE5 NADH-quinone oxidoreductase, F subunit n=9 Tax=Bacteria RepID=A7NPE5_ROSCS Length = 451 Score = 373 bits (958), Expect = e-102, Method: Compositional matrix adjust. Identities = 195/429 (45%), Positives = 265/429 (61%), Gaps = 5/429 (1%) Query: 7 TPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAG 66 +P + R D + D Y GYE R A+T +P +IV VKD+GL+GRGGAG Sbjct: 20 SPLAEHIVLRDLDIENIADFDVYLQHGGYEALRIAVTERTPADIVQTVKDSGLRGRGGAG 79 Query: 67 FSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAY 126 F TG+KW +PK + RYLLCN DE EPGT+ + ++++ PH L+EG+ ISA+A++A Sbjct: 80 FPTGVKWGFLPK--GVYPRYLLCNCDESEPGTFNNHQIIDRNPHQLIEGIAISAYAIEAN 137 Query: 127 RGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETAL 186 YI++RGE+ AA L RAIA+A G LG+NI GTG+D +++VH GAG YICGEETAL Sbjct: 138 LAYIYIRGEFAAAARRLERAIAQAYARGFLGRNIFGTGYDLDIYVHRGAGAYICGEETAL 197 Query: 187 INSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAG 246 + SLEG+ PR +PPFPA +G +GKPT +NNVETL NVP I+ +G WY+ K G Sbjct: 198 MESLEGKIGQPRLRPPFPAVAGLYGKPTIINNVETLTNVPMIVRHGAVWYRQFGTEKSPG 257 Query: 247 TKLMGFSGRVKNPGLWELPFGTTAREIL--EDYAGGMRDGLKFKAWQPGGAGTDFLTEAH 304 TK+ SG VK PG +E PFGT RE++ +Y GMR K PGGA +LT Sbjct: 258 TKVFSVSGHVKRPGNYEAPFGTPLRELIFSPEYCQGMRGNHNVKIVVPGGASAGWLTADD 317 Query: 305 LDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWS 364 LD+ M++E++ GS LG+ + +D +N V + ++EFF ESCG CTPCR+G + Sbjct: 318 LDVTMDYEALAAKGSMLGSGGVIVLDERVNAVEVAYKMDEFFKHESCGKCTPCREGTYFL 377 Query: 365 VKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIK 424 VK+L + G G+ DI L + + G FC AV P++SA++ F EFE I Sbjct: 378 VKVLHRITHGHGRQDDIPLLHDVYNQMA-GNCFCLLGESAVVPIRSALRLFPHEFERAIA 436 Query: 425 QPFSNTHLI 433 Q + H I Sbjct: 437 QAGNGRHDI 445 >UniRef50_B1L9S5 NADH dehydrogenase (Quinone) n=14 Tax=Bacteria RepID=B1L9S5_THESQ Length = 545 Score = 368 bits (944), Expect = e-100, Method: Compositional matrix adjust. Identities = 182/402 (45%), Positives = 253/402 (62%), Gaps = 3/402 (0%) Query: 22 QPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDES 81 P ++EY +++GY KAL + P E++ ++K +GL+GRGGAGF TGLKW K S Sbjct: 121 DPTRIEEYIARDGYFALAKALQ-MEPGEVIEEIKRSGLRGRGGAGFPTGLKWEFTYK-AS 178 Query: 82 MNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAV 141 + +Y+LCNADE EPGT+KDRL+ME PH L+EGM+I+ +A+ A +GYI++RGEY + Sbjct: 179 ADQKYVLCNADEGEPGTFKDRLIMEGDPHSLIEGMIIAGYAVGATKGYIYIRGEYHSSIE 238 Query: 142 NLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKP 201 L++A+ A E G LG+NI+G+GF+F+L + GAG Y+ GEETALI S+EG+ A PR KP Sbjct: 239 ILKKAVERAYEYGFLGENILGSGFNFDLKIRLGAGAYVAGEETALIESIEGKPARPRLKP 298 Query: 202 PFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGL 261 P+P T G +GKPT VNNVET NVP I+ NG EW++ GTK+ G V G+ Sbjct: 299 PYPPTFGLFGKPTVVNNVETFVNVPRIIMNGAEWFKKFGTESSPGTKVFSLVGNVVRKGI 358 Query: 262 WELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRL 321 E+P G T R+++ + GG+ G K K Q GG+ F+ LD+P++F+S K G L Sbjct: 359 VEVPMGVTVRDLIFKFGGGIEGGRKLKVVQTGGSAGTFIGPDKLDVPLDFDSYAKYGVSL 418 Query: 322 GTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDI 381 G+ + + D +V L + FF ESCG CTPCR+G V IL + RGEG+ D+ Sbjct: 419 GSGVILVADETHCVVDLALTVMRFFEHESCGKCTPCREGTRMIVNILERISRGEGKKEDL 478 Query: 382 ETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGI 423 +TL ++ R G +FC PL S + F EEF A I Sbjct: 479 DTLREIARNAGE-TSFCGLGQSIPVPLLSIVDNFEEEFRAHI 519 >UniRef50_C4XMN9 NADH-quinone oxidoreductase chain F n=5 Tax=Deltaproteobacteria RepID=C4XMN9_DESMR Length = 454 Score = 367 bits (942), Expect = e-100, Method: Compositional matrix adjust. Identities = 189/421 (44%), Positives = 264/421 (62%), Gaps = 7/421 (1%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 + ++ R +P +DEY + GYE R + +P E++ V DA L+GRGGAGF G K Sbjct: 8 VLFKNRHLGRPATIDEYLAGGGYEALRATIGQRTPAEVLQLVLDADLRGRGGAGFPAGRK 67 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 W +P D + RY++ N DEMEPGT+KDR+L+ PHL++EG+++ A+A+ A G F+ Sbjct: 68 WQGIPADH-VGTRYVVINTDEMEPGTFKDRILVNVDPHLVIEGIILCAYAVGACEGVFFI 126 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 R Y A + + A E G LGKNI+GT F F++ VH AGRYICGE +A I ++ G Sbjct: 127 RPSYEGDAKLIEQETQVARERGYLGKNILGTDFCFDVHVHRSAGRYICGEASAQIKAISG 186 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKD-AGTKLMG 251 R NPR P + G W PT VNN+ETL N+P I+ NG W++++++S+ +GTKL Sbjct: 187 LRPNPRKGGPRTSVKGLWDCPTIVNNLETLANLPGIVRNGPAWFKSLARSESGSGTKLYS 246 Query: 252 FSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEF 311 SG+V PG +ELP G T R+I+ +AGGM G FK PGGA T +L EA LDL M+F Sbjct: 247 VSGQVARPGCYELPIGVTIRDIIFTHAGGMAPGKTFKTVIPGGASTPYLPEALLDLEMDF 306 Query: 312 ESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRAL 371 + + KAG R GTA M D + +V +L EFFARESCGWCTPCR+G+P+ ++LR + Sbjct: 307 DPMRKAGQRFGTASLMVFDQDTCLVGATLSLMEFFARESCGWCTPCREGIPYVRELLRRI 366 Query: 372 ERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ---PFS 428 E GEG + L+++ L +CA APGA EPL+ + +F +E +A I + PF Sbjct: 367 EGGEGTEEHVGMLQEMLPVL--DLAYCAFAPGAAEPLRGLLTHFMDEVQAHITEKRCPFG 424 Query: 429 N 429 N Sbjct: 425 N 425 >UniRef50_A5FKK2 NADH dehydrogenase subunit F n=18 Tax=Bacteria RepID=A5FKK2_FLAJ1 Length = 456 Score = 366 bits (940), Expect = e-100, Method: Compositional matrix adjust. Identities = 196/411 (47%), Positives = 254/411 (61%), Gaps = 15/411 (3%) Query: 29 YRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLL 88 YR GY KAL L+PDE+ +VK +GL+GRGGAGF G+KWS + K +S R+L+ Sbjct: 21 YRQNGGYASVEKALKTLTPDEVTEEVKKSGLRGRGGAGFPAGMKWSFIDK-KSGRPRHLV 79 Query: 89 CNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIA 148 CNADE EPGT+KDR LME +PHLL+EGM+ S++AL A YI++RGEY+ L RAIA Sbjct: 80 CNADESEPGTFKDRFLMEYIPHLLIEGMITSSYALGANLSYIYIRGEYMWVFKILERAIA 139 Query: 149 EATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSG 208 EA AG LGKNI+G+G+D EL VH GAG YICGEETALI SLEG+R NPR KPPFPA SG Sbjct: 140 EAKAAGWLGKNILGSGYDLELHVHCGAGAYICGEETALIESLEGKRGNPRIKPPFPAVSG 199 Query: 209 AWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGT 268 W PT VNNVET+ VP I+ N + Y I + GTKL+ SG +KNPG++E+ G Sbjct: 200 LWANPTVVNNVETIATVPWIVNNSGDDYAKIGIGRSTGTKLISASGHIKNPGVYEIELGL 259 Query: 269 TAREIL--EDYAGGMRDGLKFKAWQPGGAGTDFL-------TEAHLDLPMEFESIGK--- 316 + E + ++Y GGM KA+ PGG+ L T D M +ES+ Sbjct: 260 SVDEFMNSDEYLGGMSSSRPLKAFVPGGSSVPILPAELIFKTANGEDRLMTYESLSDGGF 319 Query: 317 -AGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGE 375 GS LG+ + + +V N F+ ESCG CTPCR+G W KIL +E G+ Sbjct: 320 ATGSMLGSGGFIVYNDTACVVRNTWNFARFYHHESCGQCTPCREGTGWLEKILWRIENGQ 379 Query: 376 GQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQP 426 G+ DIE L + + G T C A P+ +AI++FR+EFE ++ P Sbjct: 380 GREEDIELLWSIQSKI-EGNTICPLGDAASWPVAAAIRHFRDEFEYHVRFP 429 >UniRef50_Q2S5I8 Respiratory-chain NADH dehydrogenase 51 Kd subunit family n=4 Tax=Bacteroidetes/Chlorobi group RepID=Q2S5I8_SALRD Length = 464 Score = 365 bits (938), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 181/396 (45%), Positives = 252/396 (63%), Gaps = 4/396 (1%) Query: 29 YRSKNGYEGARKAL--TGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRY 86 Y GY+ R+ L P ++ ++VK +GL GRGGAGF TG+KW+ MP+ + R+ Sbjct: 45 YEEHGGYDRLRRVLEDDAFEPSDVTDEVKASGLTGRGGAGFPTGIKWTFMPEPDE-RPRF 103 Query: 87 LLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRA 146 + NADE EPGT+KDR +ME PHL++EG+L++ +AL Y+++RGEY + V+L+ Sbjct: 104 IGVNADESEPGTFKDRQVMEYNPHLMLEGILLAGYALHIDTAYVYIRGEYTDWIVHLKEQ 163 Query: 147 IAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPAT 206 + A EAG +G+NIMG+ F ++ +H GAG YICGEET+L+ SLEG+R PR KPPFPA Sbjct: 164 LENAYEAGYVGENIMGSDFTMDIVLHKGAGAYICGEETSLMESLEGKRGYPRYKPPFPAQ 223 Query: 207 SGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPF 266 SG +G PT +NN ETL +VP I+ G E Y NI G L G SG VKNPG++E P Sbjct: 224 SGIFGSPTTINNAETLAHVPLIVEQGGEAYSNIGAGDMPGPALYGMSGHVKNPGVYEFPT 283 Query: 267 GTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLD-LPMEFESIGKAGSRLGTAL 325 G +++ D GGM KA PGG+ + +D + M ES+G+ GSR GT Sbjct: 284 GMLLTDMIYDVCGGMARDKDLKAVVPGGSSVPPVPADQIDGISMNDESLGEVGSRTGTFC 343 Query: 326 AMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLE 385 + +D E +MVS +R + F+ E+CG CTPCR+G W KIL ++ GEG+ DI+ L Sbjct: 344 PLVLDEETDMVSFLRRVAHFYQDETCGQCTPCREGTSWLEKILARIDEGEGRMRDIDLLL 403 Query: 386 QLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEA 421 +LC + G+T CA A GAV P+++ +K FREEF A Sbjct: 404 ELCDNMDGGRTICAFADGAVGPVRATVKRFREEFAA 439 >UniRef50_A7HLR0 NADH dehydrogenase (Quinone) n=58 Tax=Bacteria RepID=A7HLR0_FERNB Length = 610 Score = 364 bits (934), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 172/402 (42%), Positives = 258/402 (64%), Gaps = 2/402 (0%) Query: 23 PVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESM 82 P+ ++EY +++GY KALT ++P++++ ++KD+GL+GRGGAGF TGLKW L + +S Sbjct: 131 PMSIEEYIARDGYFALHKALTTMTPEDVIKEIKDSGLRGRGGAGFPTGLKWELARQQKS- 189 Query: 83 NIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVN 142 +I+Y++CNADE +PG + DR ++E PH +VE M I+ +A+ A +G++++R EY A Sbjct: 190 DIKYMICNADEGDPGAFMDRSVLEGDPHSIVEAMTIAGYAIGAQKGFVYVRAEYPLAIER 249 Query: 143 LRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPP 202 L RAI A E G LG+NI+GT F F++ + GAG ++CGEETAL++S+EG+R PR KPP Sbjct: 250 LGRAIETAHEYGFLGENILGTNFSFDIEIRIGAGAFVCGEETALMHSIEGKRGQPRVKPP 309 Query: 203 FPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLW 262 FP G WGKP+ +NNVETL VP I+ G W++ K GTK+ +G++KN GL Sbjct: 310 FPVQKGLWGKPSVINNVETLSLVPPIILKGASWFRQYGTEKSPGTKVFALAGKIKNTGLV 369 Query: 263 ELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLG 322 E+P G T RE+L + GG G + KA Q GG + D P+++ES+GK G+ +G Sbjct: 370 EVPMGITLRELLYEIGGGHPQGKQIKAVQTGGPSGGVIPSEFFDTPVDYESLGKLGAIMG 429 Query: 323 TALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIE 382 + + +D + MV + + EF ESCG CTPCR+G +L + +GEG DIE Sbjct: 430 SGGMIVLDEDDCMVDVAKFFLEFTVDESCGKCTPCREGTKVMYDLLDKITKGEGTMEDIE 489 Query: 383 TLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIK 424 LE+L + + + C A P+ S ++Y+R E+EA +K Sbjct: 490 KLERLAQVI-KDSSLCGLGQTAPNPVLSTLRYYRHEYEAHVK 530 >UniRef50_Q2LS97 NADH-quinone oxidoreductase chain F n=2 Tax=Syntrophus aciditrophicus SB RepID=Q2LS97_SYNAS Length = 638 Score = 359 bits (922), Expect = 9e-98, Method: Compositional matrix adjust. Identities = 175/411 (42%), Positives = 255/411 (62%), Gaps = 5/411 (1%) Query: 9 ETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFS 68 +T LT ++ P+ +D Y K GY +KAL PD+++ VKD+GL+GRGGAGF Sbjct: 209 QTQRLTEKI-GSIDPLSVDSYLEKGGYAAIKKALAEYQPDDVIAIVKDSGLRGRGGAGFP 267 Query: 69 TGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRG 128 G+KWS +PK + +Y++CNADE EPGTYKDR+LME+ PH L+EGM++ +A A G Sbjct: 268 AGVKWSFLPKGDMQ--KYVICNADEGEPGTYKDRILMEENPHGLLEGMMLCGYATGATVG 325 Query: 129 YIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALIN 188 YI++RGEY + L+RAI +A E G+LG NI G+ F F++F+ G G Y+CGEE++L+N Sbjct: 326 YIYIRGEYRRSIERLQRAIDQAREKGILGDNIFGSSFRFDIFIKEGGGAYVCGEESSLMN 385 Query: 189 SLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTK 248 S+EG+R PR +PPFPA +G KP+ VNNVET +VP I+ G WY+++ GTK Sbjct: 386 SMEGKRGYPRFRPPFPAGAGFLAKPSNVNNVETYASVPMIIEKGAAWYKSVGLETCTGTK 445 Query: 249 LMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLP 308 L SG++ GL E+P GTT REI+E + G+++G FK Q GG+ L +DLP Sbjct: 446 LYCLSGKLNRTGLVEMPMGTTLREIIETFGKGIKNGKTFKFAQVGGSAGGILGPELMDLP 505 Query: 309 MEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKIL 368 ++ +S KAG LG+ + + D + V + ++ FF ESCG C PCR G + Sbjct: 506 LDIDSTIKAGVTLGSGVVLVCDEDTCPVDFLLDVLNFFEHESCGQCVPCRVGTRQLHHLA 565 Query: 369 RALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEF 419 R G PGD++ + + + + + CA + P+ + +KYFRE+F Sbjct: 566 RKFATGTAVPGDLDLMVEKAKLM--KNSLCALGQSPILPITTMLKYFREDF 614 >UniRef50_C8W2X2 NADH dehydrogenase (Quinone) n=24 Tax=Bacteria RepID=C8W2X2_DESAS Length = 597 Score = 358 bits (920), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 177/413 (42%), Positives = 257/413 (62%), Gaps = 2/413 (0%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 +T R P ++EY +++GY+ K L+ SP+E+++ +K +GL+GRGGAGF TGLK Sbjct: 118 VTLRNTGLINPESIEEYIARDGYQALGKVLSKYSPEEVISAIKASGLRGRGGAGFPTGLK 177 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 W + S N +Y++CNADE +PG + DR ++E PH ++E M I +A+ A +G+I++ Sbjct: 178 WEFTAR-ASGNPKYVVCNADEGDPGAFMDRSILEGDPHSVLEAMAICGYAIGAEKGFIYV 236 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 R EY A L AI + E GLLG+NI TGF+F++ + GAG ++CGEETAL+ S+EG Sbjct: 237 RAEYPLAVQRLETAIGKCLEYGLLGRNIFSTGFNFDIEIRVGAGAFVCGEETALLASIEG 296 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGF 252 RR PR KPPFPA G WGKPT +NNVET N+P I+ NG EW+ I GTK+ Sbjct: 297 RRGEPRPKPPFPAQEGLWGKPTVINNVETWANIPPIILNGPEWFSAIGTENSKGTKVFAL 356 Query: 253 SGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFE 312 +G++ N GL E+P GT +EI+ D GG+ +G KFKA Q GG + +LD P++++ Sbjct: 357 AGKINNTGLVEVPMGTPLKEIIYDIGGGIPNGKKFKAVQTGGPSGGCIPAEYLDTPVDYD 416 Query: 313 SIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALE 372 S+ K G+ +G+ + VD + MV L + EF ESCG C PCR G ++I+ + Sbjct: 417 SLVKLGTIMGSGGMIIVDEDTCMVDLAKFFLEFVQEESCGKCAPCRIGTKRMLEIMERIV 476 Query: 373 RGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 G G+ GDIE LE+L + + C A P+ S +++FREE+ A IK Sbjct: 477 EGNGKDGDIELLEELSQGI-KSSALCGLGQTAPNPVLSTLRHFREEYIAHIKD 528 >UniRef50_Q1DDC8 NADH dehydrogenase I, F subunit n=5 Tax=Bacteria RepID=Q1DDC8_MYXXD Length = 446 Score = 356 bits (913), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 185/415 (44%), Positives = 255/415 (61%), Gaps = 13/415 (3%) Query: 26 LDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIR 85 LD YR + GYE +KAL + P I+++VK + L+GRGGAGF TGLKWS +PKD S + Sbjct: 24 LDSYRKRGGYEALKKALQ-MEPAAIIDEVKKSNLRGRGGAGFPTGLKWSFVPKD-SPKPK 81 Query: 86 YLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRR 145 YL N DE EPGT+KDR ++E PH+++EG+ I+++AL + Y++LRGE+ A + Sbjct: 82 YLAVNGDESEPGTFKDRYILEDDPHMMLEGIAIASYALGVHTCYVYLRGEFKFPAERTQA 141 Query: 146 AIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPA 205 AI EA +AG+ GK ++G ++ ++ GAG YICGEETAL+ SLEG++ PR KPPFPA Sbjct: 142 AIDEAYKAGIFGKKVLGKDYELNCYLVRGAGAYICGEETALLESLEGKKGWPRLKPPFPA 201 Query: 206 TSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELP 265 G +G PT VNNVETL +VPAI G E Y + K GT+L+ SG V PG++E+ Sbjct: 202 VVGLFGCPTVVNNVETLASVPAIFQQGAEAYAKLGTDKSGGTRLVCLSGTVNRPGVYEVS 261 Query: 266 FGTTAREILED--YAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGT 323 TT E++ D Y GM G K KA PGG+ L LD+ MEFE++ + G+ Sbjct: 262 MFTTLSELIFDDKYGRGMPAGRKVKAVIPGGSSAPVLGADELDVAMEFEALKVKQTMAGS 321 Query: 324 ALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIET 383 + +D MV + + F+A ESCG CTPCR+G PW ++LR +E G G+PGDI+ Sbjct: 322 GGVIVMDDTTCMVRSLWRVARFYAEESCGQCTPCREGTPWQTRLLRKIEEGRGEPGDIDM 381 Query: 384 LEQLCRFLGP------GKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ---PFSN 429 L + + P G T CA A P S + FR+EFEA I++ PF + Sbjct: 382 LSNVASSIAPYPPIGLGNTICALGDAAALPTHSFLMRFRDEFEAHIREHRCPFGD 436 >UniRef50_C6X0Z6 NADH-ubiquinone oxidoreductase chain F n=2 Tax=Bacteria RepID=C6X0Z6_FLAB3 Length = 467 Score = 353 bits (907), Expect = 6e-96, Method: Compositional matrix adjust. Identities = 195/416 (46%), Positives = 259/416 (62%), Gaps = 18/416 (4%) Query: 25 WLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNI 84 + D YR + GY+ KAL ++PD IV +VK +GL+GRGGAGF TG+KWS + K E + Sbjct: 33 FYDVYRRQGGYDAVDKALK-MTPDVIVEEVKTSGLRGRGGAGFPTGMKWSFLAKPEGVP- 90 Query: 85 RYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLR 144 RYL+ NADE EPGT+KDR LME LPHLL+EGM+IS++AL A YI++RGEY L Sbjct: 91 RYLVVNADESEPGTFKDRYLMEFLPHLLIEGMIISSYALGANTAYIYIRGEYSWIPDILE 150 Query: 145 RAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFP 204 +AI EA AG LGKNI+GTG+D E++VH GAG YICGEETAL+ SLEG+R NPR KPPFP Sbjct: 151 QAINEAKAAGFLGKNILGTGYDLEIYVHRGAGAYICGEETALLESLEGKRGNPRLKPPFP 210 Query: 205 ATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWEL 264 A G W PT VNNVET+ V I+ G Y I + GTKL+ G + PG++E+ Sbjct: 211 AVKGLWESPTVVNNVETIAAVVPIMNIGGAEYAKIGVGRSTGTKLISACGNINKPGVYEI 270 Query: 265 PFGTTAREIL--EDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLP--------MEFESI 314 T E + ++Y GG+ +G K KA PGG+ + A+L L M +ES+ Sbjct: 271 DMTITVEEFIYSDEYCGGIPNGKKLKACIPGGSSVP-IVPANLLLKTINGEPRYMNYESL 329 Query: 315 GKAGSRLGTALA----MAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRA 370 G GT + + +D + +V +L F+A ESCG CTPCR+G PW +IL+ Sbjct: 330 ADGGFATGTMMGSGGFIVLDEDQCVVKHTMSLAHFYAHESCGQCTPCREGTPWMYRILKN 389 Query: 371 LERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQP 426 +E G+G DI+ L + R + G T C A P+ +AI++FR+EFE I P Sbjct: 390 IETGKGTMADIDLLWDIQRKI-EGNTICPLGDAAAWPVAAAIRHFRDEFEWHIDNP 444 >UniRef50_B0TIC6 NADH dehydrogenase conserved domain protein, nuoe and nuof n=170 Tax=cellular organisms RepID=B0TIC6_HELMI Length = 906 Score = 353 bits (905), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 174/417 (41%), Positives = 258/417 (61%), Gaps = 2/417 (0%) Query: 23 PVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESM 82 P +D+Y + GY G KALT ++P ++V++V +GL+GRGGAGF TG KW+ Sbjct: 431 PEDIDDYLASGGYGGLAKALTAMTPAQVVDEVTKSGLRGRGGAGFLTGRKWAFTAAAPDT 490 Query: 83 NIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVN 142 +Y++CNADE +PG + DR ++E PH ++E M I+ +A+ A +GYI++R EY A Sbjct: 491 P-KYVVCNADEGDPGAFMDRSILEGDPHAVLEAMAIAGYAIGARQGYIYVRAEYPVAVHR 549 Query: 143 LRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPP 202 L AIA+A +AGLLG++I+GTGF F++ + GAG ++CGEETAL++S+ G+R PR++PP Sbjct: 550 LEVAIAQARQAGLLGEDILGTGFSFDIDLRLGAGAFVCGEETALLHSVSGKRGEPRARPP 609 Query: 203 FPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLW 262 +PA SG WGKPT +NNVET N+P I+ NG WY + + GTK+ +G++ N GL Sbjct: 610 YPALSGLWGKPTLLNNVETYANIPQIIVNGAAWYAAMGTERSKGTKIFSLAGKINNTGLI 669 Query: 263 ELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLG 322 E+P GTT R I+ D GG+ G FKA Q GG L +LD P++++S+ GS +G Sbjct: 670 EVPMGTTLRTIIYDIGGGIPGGKAFKAVQTGGPSGGCLPAEYLDTPIDYDSLIAVGSMMG 729 Query: 323 TALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIE 382 + + +D MV + R EF ESCG CTPCR G ++I+ + G+G+P D+E Sbjct: 730 SGGLIVMDESDCMVDIARFYLEFTQDESCGKCTPCRIGTRRLLEIITGITEGKGEPKDLE 789 Query: 383 TLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLINGIQPN 439 LE+L R + + C A + S ++YFR E+EA I + ++P Sbjct: 790 RLEELGRDIREA-SLCGLGQTAPNLVLSTLRYFRHEYEAHINHKRCPAGVCAALRPK 845 >UniRef50_B2ULY8 NADH dehydrogenase (Quinone) n=58 Tax=Bacteria RepID=B2ULY8_AKKM8 Length = 466 Score = 352 bits (904), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 190/443 (42%), Positives = 275/443 (62%), Gaps = 27/443 (6%) Query: 9 ETHPLTWR--LRDDKQPVW---LDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRG 63 E HP R L++ + W +D Y + GYE +KAL G+ P ++++VK +GL+GRG Sbjct: 10 EPHPRETRRILKNVNREGWNTSIDCYLADGGYEELKKAL-GMEPRAVIDEVKKSGLRGRG 68 Query: 64 GAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFAL 123 GAGF TG+KW+ +P + + + YL+CN DE EPGT+KDR ++ Q PH L+EGM+IS++A+ Sbjct: 69 GAGFPTGVKWTFIPPNNTKPV-YLVCNCDESEPGTFKDRYIVHQDPHQLIEGMVISSYAV 127 Query: 124 KAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEE 183 A++ YI++R E+ AA + +A+ EA E G LG NI G+G++ E+ +H GAG YICGEE Sbjct: 128 GAHQAYIYMREEFPIAAEIMLKALQEARERGFLGSNIQGSGYNLEIHLHRGAGAYICGEE 187 Query: 184 TALINSLEGRRANPRSKPP-FPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKS 242 TAL+NSLEG R PR KPP FPA G +G PT VNNVE+LC V I+A G E Y Sbjct: 188 TALLNSLEGDRPYPRIKPPYFPAAIGLYGCPTIVNNVESLCQVKHIMAMGGEAYSQEGAK 247 Query: 243 KDAGTKLMGFSGRVKNPGLWELPFGT-TAREILEDYAGGMRDGLKFKAWQPGGAGTDFL- 300 + GT+++G SG VK PG +E+ G+ T E+L D GG RDG +FKA PGG+ + + Sbjct: 248 RSPGTRIIGVSGDVKRPGFYEIVSGSMTFGELLYDVCGGPRDGRQFKAVIPGGSSSKVMR 307 Query: 301 TEAH---------------LDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEF 345 T+A D+P++ +SI + GS G+ + +D +M + N+ F Sbjct: 308 TDAEYKVQNPDGTMGKITFFDIPLDLDSIARHGSMSGSGAVIVMDDSRSMPWAMNNINRF 367 Query: 346 FARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAV 405 +A ESCG CTPCR+G PW +K+ + G+ P D++ L ++ + GKT CA A Sbjct: 368 YAHESCGQCTPCREGCPWMMKLSTRILEGKAAPSDVDLLIEVANQI-EGKTVCAFGEAAS 426 Query: 406 EPLQSAIKYFREEFEAGIKQPFS 428 P Q+ + F+EEF A + PF+ Sbjct: 427 WPTQAMVSKFKEEFVA-LTDPFN 448 >UniRef50_D2R5G5 NADH dehydrogenase (Quinone) n=3 Tax=Planctomycetaceae RepID=D2R5G5_9PLAN Length = 450 Score = 349 bits (896), Expect = 9e-95, Method: Compositional matrix adjust. Identities = 182/409 (44%), Positives = 257/409 (62%), Gaps = 14/409 (3%) Query: 29 YRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLL 88 Y GY +K L ++P+++ VK +GL+GRGGAGF TGLKW+ +P++ I + L Sbjct: 23 YERDGGYSALKKVLK-MTPNDVKETVKSSGLRGRGGAGFPTGLKWTFLPQNHPGPIYFCL 81 Query: 89 CNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIA 148 NADE EPGT+ +R+LME PH ++EG++I+ FA +A Y ++R EY A ++RAI Sbjct: 82 -NADESEPGTFNNRILMEDDPHQVLEGIIIACFATQARAAYFYMRCEYPTAYERVKRAIE 140 Query: 149 EATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSG 208 E EAG LG+NI+G+G+ ++ +H GAG YICGEET LI SLEG+RA PR KPPFPA G Sbjct: 141 ECYEAGYLGENILGSGYTLDIHLHRGAGAYICGEETGLIESLEGKRAWPRIKPPFPAVEG 200 Query: 209 AWGKPTCVNNVETLCNVPAILANGVEWYQNI------SKSKDAGT---KLMGFSGRVKNP 259 A+ KPT VNNVET V I NGV+W+++I + +DAG+ KL SG V P Sbjct: 201 AFRKPTVVNNVETCACVTQIFRNGVDWFKSIGIAPDPNNPRDAGSYGPKLYCLSGHVNKP 260 Query: 260 GLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGS 319 G +E P G T ++++ D+ GG+ G K KA PGG LT L P++F GK G Sbjct: 261 GCYEAPLGITVKDLINDFGGGVWKGRKAKAVIPGGISMGLLTGDELHCPLDFNGPGKFGC 320 Query: 320 R-LGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQP 378 LGTA + +D + +MV + N FF+ ESCG CTPCR+G W+ +++ ++ G+G+ Sbjct: 321 LGLGTAAVVVMDDQTSMVDFLLNSCRFFSHESCGQCTPCREGTSWATRMMTRIKHGQGRL 380 Query: 379 GDIETLEQLCRFLG--PGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 D++ L ++ +G PG T C A GA P+++ IK FR E E IK+ Sbjct: 381 KDLDLLAEIGETIGIMPGSTICGLADGAAWPIKNCIKKFRGELEEFIKR 429 >UniRef50_C1A8Y9 NADH-quinone oxidoreductase chain F n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8Y9_GEMAT Length = 442 Score = 345 bits (886), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 187/421 (44%), Positives = 250/421 (59%), Gaps = 10/421 (2%) Query: 8 PETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGF 67 P P+ + D + L +R++ GYE KAL P EI N VK++GL+GRGGAGF Sbjct: 9 PRETPVLSKYFGDPEARTLAGWRARGGYEALEKALA-TDPVEIQNIVKESGLRGRGGAGF 67 Query: 68 STGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYR 127 TG+KWS M D + YL CNADE EPGT+KDR +M PH LVEG+ + A A+ A Sbjct: 68 PTGMKWSFMKPDGKTH--YLCCNADESEPGTFKDREIMRWTPHGLVEGVALGAHAIYAET 125 Query: 128 GYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALI 187 YI++RGE+ E + A+ EA AG+LG N MG+G ++ VH GAG YICGEETAL+ Sbjct: 126 AYIYIRGEFTEPYARVCAAVEEAYAAGILGANAMGSGKRVDVHVHRGAGAYICGEETALM 185 Query: 188 NSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKS---KD 244 NSLEGRR NPR KPPFPA +G +GKPT +NNVETL VP I+ NG EWY+ ++ K Sbjct: 186 NSLEGRRGNPRIKPPFPAVAGLFGKPTTINNVETLTAVPYIVKNGAEWYKQFGRADNPKS 245 Query: 245 AGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLT--E 302 GTKL G + PG +E+ G +E L D GG G + KA PGG+ LT E Sbjct: 246 IGTKLFSVCGNISRPGNYEVALGFPFKEFLYDLCGGPLPGREIKAVIPGGSSVPILTREE 305 Query: 303 AHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLP 362 A L M++E + G+ +G+ + D +MV + L F+A ESC C+ CR+G Sbjct: 306 AESAL-MDYEGMVAVGTMMGSGGVIVFDDRQDMVRQIARLTRFYAHESCAQCSQCREGTA 364 Query: 363 WSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAG 422 W+ +I+ + G+G D++TL + + GKT C + P+ S +K FR EFEA Sbjct: 365 WTTRIMERIRDGQGTAEDLDTLLSIADNMS-GKTICVLSDSCATPVVSGLKKFRHEFEAK 423 Query: 423 I 423 I Sbjct: 424 I 424 >UniRef50_B8FFJ2 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=8 Tax=Bacteria RepID=B8FFJ2_DESAA Length = 1044 Score = 343 bits (880), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 169/401 (42%), Positives = 251/401 (62%), Gaps = 2/401 (0%) Query: 23 PVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESM 82 P ++ Y + GY+ + L+G++P+++ +V DA L+GRGGAGF GLKW + S Sbjct: 147 PTSIEHYIAAGGYQALVRVLSGMAPEQVAQEVIDAKLRGRGGAGFPAGLKWKF-ARQSSA 205 Query: 83 NIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVN 142 N +Y++CNADE +PG + DR ++E PH ++EGM+I AFA+ A G+I++R EY A + Sbjct: 206 NPKYIICNADEGDPGAFMDRAILEGDPHSVIEGMIIGAFAMGARYGFIYVREEYPIAVEH 265 Query: 143 LRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPP 202 L AIA+A E G+LG+NI+GTGF F L + GAG ++CGEETAL+ S+EG+R PR++PP Sbjct: 266 LNCAIAQAGELGILGENILGTGFSFSLSLKMGAGAFVCGEETALMASIEGKRGMPRARPP 325 Query: 203 FPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLW 262 FPA SG GKP+ +NNVET NVP IL NG WY + GTK+ +G+V N GL Sbjct: 326 FPAQSGVDGKPSNINNVETFANVPLILKNGAGWYAQVGTENSKGTKIFSLAGKVNNTGLV 385 Query: 263 ELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLG 322 E+P GT+ RE++ D GG+ G KFKA Q GG + L+L ++++++ K G+ +G Sbjct: 386 EVPIGTSIREVVFDIGGGIPKGRKFKAVQMGGPSGGCVPAQFLNLSIDYDTLQKIGAIMG 445 Query: 323 TALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIE 382 + + +D MV + R F ESCG C+PCR G ++IL + G G+ DIE Sbjct: 446 SGGMVVMDENNCMVEIARFFLAFTQSESCGKCSPCRLGTTQLLEILTRITTGRGRLEDIE 505 Query: 383 TLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGI 423 T++++ R + + C +P S ++YF +E+E I Sbjct: 506 TIKEIGRTMTEA-SLCGLGQNCAKPAISTLQYFLKEYEDHI 545 >UniRef50_Q3A639 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A639_PELCD Length = 571 Score = 340 bits (872), Expect = 6e-92, Method: Compositional matrix adjust. Identities = 168/411 (40%), Positives = 259/411 (63%), Gaps = 3/411 (0%) Query: 14 TWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKW 73 R R P + +Y ++GY+GA KALT +S +E++N+ +GL+GRGGAGF GLKW Sbjct: 157 VMRNRGLIDPAKIKDYIGRDGYQGAIKALTEMSSEEVINEAIGSGLRGRGGAGFPIGLKW 216 Query: 74 SLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLR 133 +++ +I+Y+LCNADE +PG + DR +ME PH ++EG++I A A+ A++GYI+ R Sbjct: 217 KFAAAEKN-DIKYILCNADEGDPGAFMDRNVMESDPHSIIEGLIIGAKAIGAHQGYIYCR 275 Query: 134 GEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGR 193 EY A L +AI +A LLG+NI+GTGF F++ V+ GAG ++CGEETAL+ S+EG+ Sbjct: 276 AEYPLAIETLNKAINQARALDLLGENILGTGFSFDISVYEGAGAFVCGEETALMRSIEGK 335 Query: 194 RANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFS 253 R NPR KPPFPA +G + KPT +NNVETL N+P I+ G +WY+ I K GTK+ + Sbjct: 336 RGNPRPKPPFPAKAGLFEKPTVLNNVETLSNIPQIIVKGADWYKEIGTEKSPGTKIFSIT 395 Query: 254 GRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFES 313 G ++N G E+P GTT I+ + G + KA Q GG + + ++ + +++E+ Sbjct: 396 GDIENVGCVEVPIGTTVDTIV-NQIGIVSPDKNLKAVQLGGPSGGCIPKDYMHVAVDYET 454 Query: 314 IGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALER 373 + + G+ +G+ +A+ + + V + + +F E+CG C P R+G ++IL ++ Sbjct: 455 LQEYGAIMGSGGLIAMSDDKSGVDIAKFFIDFCQDEACGKCLPGREGTKQMLQILEKIDS 514 Query: 374 GEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIK 424 GEG P DIETL+ LC + CA AV P+ S ++YF EE++ +K Sbjct: 515 GEGSPDDIETLKVLCGVIRK-TALCALCKTAVNPVLSTLRYFPEEYQEAVK 564 >UniRef50_C0GLW6 NADH dehydrogenase (Quinone) n=2 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GLW6_9DELT Length = 774 Score = 339 bits (870), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 168/416 (40%), Positives = 254/416 (61%), Gaps = 3/416 (0%) Query: 23 PVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESM 82 P + +Y + G++ +K + +SPD+++ +VK A L+GRGGAGF G KW+ + Sbjct: 147 PHDIHQYIAAGGFKAVKKMFSRMSPDDVLEEVKKANLRGRGGAGFPAGFKWAHTKRSGKG 206 Query: 83 NIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVN 142 + ++ N DE +PG + DR +ME P L+EGMLI A+++ A G+I++R EY A Sbjct: 207 VPKLVIANGDEGDPGAFMDRSIMEGDPFSLLEGMLICAYSIDANFGFIYVRHEYPLAIKT 266 Query: 143 LRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPP 202 L +AI +A E GLLG+NI+GTGFDF +F+ GAG ++CGE T+L+ SLEG+R PR++PP Sbjct: 267 LEKAIKQAEEMGLLGRNILGTGFDFSVFIKEGAGAFVCGEATSLVASLEGQRGFPRARPP 326 Query: 203 --FPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPG 260 GAWG P+ +NN+ET VP I+ G +W+ I GTK+ +G+V N G Sbjct: 327 RLSEVGGGAWGYPSNLNNIETYACVPPIIEKGADWFLGIGTPGSPGTKVFSLAGKVNNTG 386 Query: 261 LWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSR 320 L E+P G T REI+++ GG+ + KFKA Q GG + E +LDLP++F+S+ + GS Sbjct: 387 LVEVPMGITLREIVDEIGGGILNNRKFKAIQTGGPSGGCIPEQYLDLPVDFDSLWQVGSM 446 Query: 321 LGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGD 380 +G+ + +D MV + + F ESCG C PCR G ++I+ + GEGQPGD Sbjct: 447 MGSGGMVVMDESDCMVDIAKFFLAFCQSESCGKCPPCRVGTYQMLQIMERITSGEGQPGD 506 Query: 381 IETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLINGI 436 IE LE+L +G G + C A P+ + ++YFREE+E I + ++ +G+ Sbjct: 507 IERLEKLIETVGEG-SLCGLGRSAPNPVATTLRYFREEYEEHIHDKYCRANVCSGM 561 >UniRef50_C1F9D7 NADH dehydrogenase I, F subunit n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F9D7_ACIC5 Length = 437 Score = 339 bits (869), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 175/420 (41%), Positives = 244/420 (58%), Gaps = 4/420 (0%) Query: 1 MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLK 60 M + P+ P+ R + V +D Y GY RK L + PD I+N++K +GL+ Sbjct: 1 MAYLTTHPDVVPVV-SYRFGRGAVDIDRYIELEGYSSVRKCLE-MEPDAIINEMKTSGLR 58 Query: 61 GRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISA 120 GRGGAGF TG+KWS +PK +S +Y+L N DE EPGT KDRL+ E PH ++EG +I+ Sbjct: 59 GRGGAGFPTGMKWSFVPK-QSAKPKYVLVNGDESEPGTCKDRLIFEHDPHSVIEGTMIAG 117 Query: 121 FALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYIC 180 A+ A G+I+LRGEY + +A+A A G LGK I G+ DF++ V TGAG Y Sbjct: 118 LAIGAKMGFIYLRGEYRYLIQIMEKAVAAAYAKGFLGKGIFGSQHDFDVVVQTGAGAYEV 177 Query: 181 GEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNIS 240 GEE+AL+ SLEG+R PR KPPFPA G +G PT +NN ETL +VP I G Y Sbjct: 178 GEESALMESLEGKRGVPRIKPPFPAVVGLYGGPTVINNAETLASVPHIFRIGAAEYAKYG 237 Query: 241 KSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFL 300 ++ GT+L SG V+ PG++ELP G ++++ + AGG+ G K KA PGG+ L Sbjct: 238 TERNGGTRLFCISGHVEKPGVYELPMGYNLKKMIYEVAGGILGGKKLKAVVPGGSSVPVL 297 Query: 301 TEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDG 360 +D+ M+F+ + KAGS LG+ + +D + MV +F+ ESCGWC PCR+G Sbjct: 298 LPDEIDIGMDFDQVAKAGSMLGSGGVVVLDESVCMVEFALRTIKFYRHESCGWCIPCREG 357 Query: 361 LPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFE 420 W K + L G DI ++ + + G+TFC A P +K FR+EFE Sbjct: 358 TDWLQKSITRLHMGGAVDKDINNIQYIAENM-LGRTFCPLGDAAAMPTIGFVKKFRKEFE 416 >UniRef50_O66841 NADH-quinone oxidoreductase subunit F n=6 Tax=Aquificales RepID=NUOF_AQUAE Length = 426 Score = 336 bits (862), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 178/395 (45%), Positives = 243/395 (61%), Gaps = 10/395 (2%) Query: 26 LDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIR 85 +DEY GY+ KAL +SP+EI++ V + L+GRGGAGF TG KW ++ R Sbjct: 31 IDEYLKDGGYQALEKALN-MSPEEIIDWVDKSTLRGRGGAGFPTGKKWKFAVQNPGP--R 87 Query: 86 YLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRR 145 Y +CNADE EPGT+KDR+++E+ PHLL+EG++IS++A+ A YI++RGEY LR Sbjct: 88 YFICNADESEPGTFKDRIIIERDPHLLIEGIIISSYAIGANEAYIYIRGEYPAGYYILRD 147 Query: 146 AIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPA 205 AI EA + G LGKNI+G+GFD E++V GAG YICGEETALI SLEG+R +PR KPP+P Sbjct: 148 AIEEAKKKGFLGKNILGSGFDLEIYVARGAGAYICGEETALIESLEGKRGHPRLKPPYPV 207 Query: 206 TSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELP 265 G WGKPT VNNVET+ NVP I++ G E Y+ I S AG KL SG+VK PG++ELP Sbjct: 208 QKGLWGKPTVVNNVETIANVPFIISMGWEEYRYIGPSDYAGPKLFPVSGKVKKPGVYELP 267 Query: 266 FGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTAL 325 TT RE++ YAGG K KA G D + LD+PM++ +G GT Sbjct: 268 MNTTLREVIFKYAGGTLGNKKVKAVFSG--ALDCFSSEELDIPMDYSPLGFG----GTGT 321 Query: 326 AMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLE 385 + + E ++V + EF+ E+CG CTPCR G +L + +GE D E + Sbjct: 322 VIVLTEEDDIVEAALKIAEFYEHETCGQCTPCRVGCYEQANLLEKIYKGEATEQDWEGFD 381 Query: 386 QLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFE 420 + R + P + C A ++ ++ F EE+E Sbjct: 382 FVNRNIQP-TSICGLGAVAGRLIRQTLEKFPEEWE 415 >UniRef50_A8MJ02 NADH dehydrogenase (Quinone) n=4 Tax=Bacteria RepID=A8MJ02_ALKOO Length = 631 Score = 335 bits (859), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 172/403 (42%), Positives = 255/403 (63%), Gaps = 2/403 (0%) Query: 22 QPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDES 81 P ++EY + +GY+ K LT ++P+++V ++K +GL+GRGG GF TG+KW K E Sbjct: 162 NPEDINEYIAFDGYKALAKTLTTMTPEDVVAEIKASGLRGRGGGGFPTGMKWDFTAKAEG 221 Query: 82 MNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAV 141 +Y++CNADE +PG + DR ++E P+ L+E M+IS +A+ A GY+++R EY A Sbjct: 222 KE-KYVVCNADEGDPGAFMDRSILEGDPNALIEAMIISGYAVGAQWGYVYVRAEYPIAVG 280 Query: 142 NLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKP 201 L AI +A E GLLG NI+GT F F++ + GAG ++CGEETAL+NS+EG+R PR +P Sbjct: 281 RLDLAIKQAREKGLLGSNILGTDFSFDMEIRLGAGAFVCGEETALLNSIEGKRGMPRPRP 340 Query: 202 PFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGL 261 PFPA G WGKPT +NNVET N+P I+ +G E + K GTK+ G++ + GL Sbjct: 341 PFPAVKGLWGKPTLINNVETFANIPQIILHGAEEFIKTGTEKSKGTKVFALGGKINHTGL 400 Query: 262 WELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRL 321 E+P GTT REI+ + GG+ +G FKA Q GG ++ HLD P++++++ GS + Sbjct: 401 VEIPMGTTLREIVYEIGGGIPNGKAFKAVQTGGPSGGCISVEHLDTPIDYDNLIALGSMM 460 Query: 322 GTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDI 381 G+ + +D + MV + R +F ESCG CTPCR+G ++IL + G+G+ GDI Sbjct: 461 GSGGMIVMDEDNCMVDIARFFLDFTVDESCGKCTPCREGTKRMLEILERITEGKGKEGDI 520 Query: 382 ETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIK 424 E LE L + + + C A P+ S +KYFR E+EA I+ Sbjct: 521 ERLESLAQSIKI-SSLCGLGQTAPNPILSTLKYFRHEYEAHIQ 562 >UniRef50_B1ZTP3 NADH dehydrogenase (Quinone) n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZTP3_OPITP Length = 668 Score = 335 bits (858), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 176/421 (41%), Positives = 261/421 (61%), Gaps = 4/421 (0%) Query: 6 RTPETHP-LTWRLRDDKQPVWLDEY-RSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRG 63 +TPE + R + P +++Y R GY+ RKAL L+P++++ ++K +GL+GRG Sbjct: 214 KTPERQARIVLRNCGEVDPDSVEDYLRHAQGYQALRKALFELTPEKVIGELKASGLRGRG 273 Query: 64 GAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFAL 123 GAGF T +KW L + + RY++CN DE +PG + DR ++E PH ++EGM+++ FA+ Sbjct: 274 GAGFPTWMKWQLT-RAQPAEQRYVICNGDEGDPGAFMDRSVLESDPHSVLEGMILAGFAM 332 Query: 124 KAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEE 183 A RGY ++R EY +A + RAIA+A EAGLLG+NI+G+GF F + GAG ++CGEE Sbjct: 333 GASRGYFYIRAEYPKAVERVERAIAQAREAGLLGENILGSGFSFNAKIRLGAGAFVCGEE 392 Query: 184 TALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSK 243 TALI S+EGRR +P +PP+P+ G WG+PT +NNVETL N+PAIL G WY K Sbjct: 393 TALIASIEGRRGSPSPRPPYPSVRGLWGRPTAINNVETLANIPAILLRGGAWYAGYGTEK 452 Query: 244 DAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEA 303 GTK+ +G+V N L E+P GTT R+I+ + GG+ D + KA Q GG + E Sbjct: 453 SKGTKVFAVTGKVMNAQLVEVPMGTTLRQIVYEICGGVLDDKEIKAVQTGGPSGGVIPEK 512 Query: 304 HLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPW 363 HLD P+ +E++ + GS +G+ + +D +MV + R F ESCG C PCR G Sbjct: 513 HLDTPVSYETLQQLGSIMGSGGMLVMDKNDSMVDVARFYLRFCVDESCGKCAPCRIGGYQ 572 Query: 364 SVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGI 423 ++IL + RG G D+ TL ++C + + C A P+ S ++YF EE++A I Sbjct: 573 MLQILDRISRGRGSAEDLVTLRRICTAMQKA-SLCGLGQTAPNPVLSTLRYFEEEYKAYI 631 Query: 424 K 424 + Sbjct: 632 E 632 >UniRef50_Q2LYA9 NADH:ubiquinone oxidoreductase, NADH-binding subunit n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LYA9_SYNAS Length = 637 Score = 334 bits (857), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 179/424 (42%), Positives = 264/424 (62%), Gaps = 3/424 (0%) Query: 22 QPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDES 81 P +DEY ++ GY KALT +SP++++ +VK +GL+GRGG GF TG KW + E Sbjct: 167 DPENMDEYIARGGYTALHKALTTMSPEDVILEVKTSGLRGRGGGGFPTGTKWESCRRAEG 226 Query: 82 MNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAV 141 I+Y++CN DE +PG Y DR LME PH ++EGM+I A+A+ A+ GYI++R EY A Sbjct: 227 -EIKYVICNGDEGDPGAYMDRSLMEGDPHSVLEGMIIGAYAIGAHEGYIYVRNEYPLAVA 285 Query: 142 NLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKP 201 NL+ AI +A EAGLLGKNI+GTGF+F++ + GAG ++CGE TAL+ SLEG+ PR+K Sbjct: 286 NLQHAIGQAREAGLLGKNILGTGFEFDIKIAKGAGAFVCGESTALMASLEGKAGEPRAKY 345 Query: 202 PFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGL 261 G W +P+ +NNVET NVP I+A G +W+ I GTK+ G++ N GL Sbjct: 346 IHTVEQGLWNRPSNLNNVETWANVPVIIARGGQWFSGIGVKHSTGTKVFSLVGKINNIGL 405 Query: 262 WELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRL 321 E+P G ++I+ + GG+ G KFKA Q GG + + +DLP++F+S+ +AGS + Sbjct: 406 VEVPMGIPLKDIIYEIGGGIPGGRKFKAVQTGGPSGGCIPDTMIDLPVDFDSLWEAGSMM 465 Query: 322 GTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDI 381 G+ + +D + MV + R EF ESCG C PCR+G+ +IL+ + G+G+ GD+ Sbjct: 466 GSGGMIVMDDKTCMVDIARYFIEFLVSESCGKCVPCREGIYRMNEILQDICAGKGRRGDL 525 Query: 382 ETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLING-IQPNL 440 E L ++ + G + CA A P+ S I+YFR E++A I+ + IQ N+ Sbjct: 526 ELLGRMAEAIKDG-SLCALGGSAPNPVLSTIRYFRSEYDAHIRSKKCPAGVCKALIQYNI 584 Query: 441 LKER 444 KE+ Sbjct: 585 DKEK 588 >UniRef50_A3DCA0 NADH dehydrogenase (Quinone) n=10 Tax=cellular organisms RepID=A3DCA0_CLOTH Length = 597 Score = 334 bits (856), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 170/397 (42%), Positives = 249/397 (62%), Gaps = 2/397 (0%) Query: 23 PVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESM 82 P +DEY + +GY+ K LT ++P+++V+ +K +GL+GRGG GF TGLKW K ++ Sbjct: 127 PENIDEYIAFDGYKALAKVLTEMTPEQVVDVIKRSGLRGRGGGGFPTGLKWEFAMKQDA- 185 Query: 83 NIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVN 142 + +Y+ CNADE +PG + DR ++E PH ++E M I+ +A+ A +GY+++R EY A Sbjct: 186 DQKYVCCNADEGDPGAFMDRSVLEGDPHSVIEAMAIAGYAIGANQGYVYVRAEYPIAVKR 245 Query: 143 LRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPP 202 L AI +A E GLLGKNI GT F F++ + GAG ++CGEETAL+ S+EG R PR +PP Sbjct: 246 LGIAIQQAREYGLLGKNIFGTDFSFDVDIRLGAGAFVCGEETALMTSIEGHRGEPRPRPP 305 Query: 203 FPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLW 262 FPA G W KPT +NNVET N+P I+ G EW+ +I K GTK+ G++ N GL Sbjct: 306 FPAVKGLWQKPTLLNNVETYANIPQIILKGPEWFASIGTEKSKGTKVFAVGGKINNTGLV 365 Query: 263 ELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLG 322 E+P GTT RE++ D GG+ +G KFKA Q GG + +H+D P++++S+ + GS +G Sbjct: 366 EIPMGTTLREVIYDIGGGIPNGKKFKAAQTGGPSGGCIPASHIDTPIDYDSLTQLGSMMG 425 Query: 323 TALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIE 382 + + +D + MV + + EF ESCG C PCR G +IL + G+G+ GDIE Sbjct: 426 SGGLIIMDEDTCMVDIAKFFLEFTVDESCGKCPPCRIGTKRMYEILERITEGKGEEGDIE 485 Query: 383 TLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEF 419 LE L + + C A P+ S ++YFR E+ Sbjct: 486 KLEMLAKNI-KASALCGLGQTAPNPILSTLRYFRHEY 521 >UniRef50_Q39TW5 Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit n=5 Tax=cellular organisms RepID=Q39TW5_GEOMG Length = 635 Score = 333 bits (855), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 169/417 (40%), Positives = 254/417 (60%), Gaps = 13/417 (3%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 L+ LR D + +D+Y + GY K L ++P++++ ++K + L+GRGG GF K Sbjct: 140 LSENLRLDSKS--MDDYLAIGGYSALSKVLFQMTPEDVMGEIKKSNLRGRGGGGFPAWRK 197 Query: 73 WSLMPKDESMN----IRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRG 128 W +ES N I+Y++ NADE +PG + DR L+E PH ++EG++I A+A+ A+ G Sbjct: 198 W-----EESRNAPDPIKYVIVNADEGDPGAFMDRALIEGNPHSILEGLIIGAYAVGAHEG 252 Query: 129 YIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALIN 188 +I++R EY A N+ AI +A+E G +GK+I+G+GFDF + VH GAG ++CGE +AL+ Sbjct: 253 FIYVRQEYPLAVENINLAIRQASERGFVGKDILGSGFDFTVKVHMGAGAFVCGESSALMT 312 Query: 189 SLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTK 248 +LEGR PR K A G W P+ +NNVET NV I+ G +W+ + + GTK Sbjct: 313 ALEGRAGEPRPKYIHTAVKGVWDHPSVLNNVETWANVTQIITKGADWFTSYGTAGSTGTK 372 Query: 249 LMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLP 308 + G++ N GL E+P G T R+I+ GG+ G KFKA Q GG + EA LDLP Sbjct: 373 IFSLVGKITNTGLVEVPMGVTLRDIITKVGGGIPGGKKFKAVQTGGPSGGCIPEAMLDLP 432 Query: 309 MEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKIL 368 ++F+ + KAGS +G+ + +D + MV + R +F ESCG CTPCR+G+ + +L Sbjct: 433 VDFDELTKAGSMMGSGGMIVMDEDTCMVDIARYFIDFLKDESCGKCTPCREGIRQMLAVL 492 Query: 369 RALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 + G+G+ GDIE LE+L G CA A P+ S I+YFR+E+EA I++ Sbjct: 493 TRITVGKGKEGDIELLEELAE--STGAALCALGKSAPNPVLSTIRYFRDEYEAHIRE 547 >UniRef50_B4SQT1 NADH-quinone oxidoreductase, F subunit n=16 Tax=cellular organisms RepID=B4SQT1_STRM5 Length = 446 Score = 332 bits (850), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 181/418 (43%), Positives = 249/418 (59%), Gaps = 11/418 (2%) Query: 8 PETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALT-GLSPDEIVNQVKDAGLKGRGGAG 66 P H + + P + Y GY RK L + P++++ VK +GL+GRGGAG Sbjct: 15 PLPHQVVYTTLHYDTPWSYESYLKTGGYAALRKILEEKIPPEQVIEMVKASGLRGRGGAG 74 Query: 67 FSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAY 126 F TGLKWS MPK +Y+LCN+DE EPGT KDR ++ PH +VEGM I+ +A + Sbjct: 75 FPTGLKWSFMPKGNMQ--KYILCNSDESEPGTCKDRDILRYNPHSVVEGMAIACYATGST 132 Query: 127 RGYIFLRGEYI-EAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETA 185 GY +LRGE+ E + +A+A+A G LGKN+MG+G D +++ GAG YICGEETA Sbjct: 133 VGYNYLRGEFHHEPFEHFEQALADAYANGWLGKNVMGSGVDIDIYGALGAGAYICGEETA 192 Query: 186 LINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDA 245 L+ SLEG++ PR KPPFPA G +GKP+ +NN ET +VPAI+ NG EW++ +S + + Sbjct: 193 LMESLEGKKGQPRYKPPFPANFGLYGKPSTINNTETYGSVPAIIRNGPEWFKGLSLTANG 252 Query: 246 GTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHL 305 G K SG V+N G +E+P GTT ++L+ AGG+R G K PGG LT A L Sbjct: 253 GPKCFSVSGCVQNGGNFEVPLGTTFHDLLQ-MAGGLRPGRTLKGAIPGGVSMPVLTAAEL 311 Query: 306 -DLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWS 364 DLPM++++I GS LG+ + +D + V + +FF +ESCG CTPCR+G W Sbjct: 312 KDLPMDYDTIRALGSGLGSGAIVVLDDSVCCVKFACRISQFFHKESCGQCTPCREGTGW- 370 Query: 365 VKILRALERGEGQPGDIETLEQLCRFLGP--GKTFCAHAPGAVEPLQSAIKYFREEFE 420 + R LER +E L QL G G T CA A P+Q ++ F +EFE Sbjct: 371 --MHRVLERIVAGKATMEDLHQLKAVAGQIEGHTICAFGEAAAWPIQGFLRQFWDEFE 426 >UniRef50_C6A4M4 NADH:ubiquinone oxidoreductase, NADH-binding subunit F n=33 Tax=cellular organisms RepID=C6A4M4_THESM Length = 602 Score = 331 bits (849), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 168/403 (41%), Positives = 253/403 (62%), Gaps = 3/403 (0%) Query: 22 QPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDES 81 P ++EY + GYE +KA + P+EI++ + +GL+GRGGAGF TGLKW +D Sbjct: 127 DPENIEEYIAAGGYEALKKAFK-MKPEEIIDFITKSGLRGRGGAGFPTGLKWKFT-RDAP 184 Query: 82 MNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAV 141 + +Y++CNADE +PG + DR ++E PH ++EGM+I A+A+ A +G+I++R EY A Sbjct: 185 GDEKYIVCNADEGDPGAFMDRNVLEGDPHRVIEGMIIGAYAIGATKGFIYVRAEYPLAIK 244 Query: 142 NLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKP 201 LR A+ +A E G LG+NI+G+GF FE+ + GAG ++CGEETALI S+EG+R PR +P Sbjct: 245 RLRIALKQAREKGFLGENILGSGFSFEIVIKEGAGAFVCGEETALIASIEGKRGMPRPRP 304 Query: 202 PFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGL 261 P+PA G WG+PT +NNVET NVP I+ +G E Y + K GTK+ SG++K+ G Sbjct: 305 PYPAQKGLWGRPTNINNVETWANVPWIIKHGWEAYAALGTEKSKGTKVFALSGKIKHGGN 364 Query: 262 WELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRL 321 E+P G T REIL + GG + G K KA Q GG + + + P+++ES+ G+ + Sbjct: 365 VEVPMGITLREILYEIGGGTKTGKKIKAVQLGGPSGGCIPDYLFNTPVDYESVTATGAIM 424 Query: 322 GTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDI 381 G+ + +D + MV + + +F +ESCG CT CR G ++L + +GEG DI Sbjct: 425 GSGGMVVMDEDTCMVDVAKFFLDFTVKESCGKCTFCRLGTKRMWELLDKITKGEGALEDI 484 Query: 382 ETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIK 424 E LE+L + G + C A P+ + +KYF++E+ A I+ Sbjct: 485 EKLEKLAPLVKTG-SLCGLGQTAPNPVLTTLKYFKDEYLAHIE 526 >UniRef50_A7HJL0 NADH dehydrogenase (Quinone) n=5 Tax=Bacteria RepID=A7HJL0_FERNB Length = 632 Score = 330 bits (846), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 171/394 (43%), Positives = 249/394 (63%), Gaps = 2/394 (0%) Query: 26 LDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIR 85 +++Y ++ GY K L+G+ EI+ Q+K AGL+GRGG GF TGLKW + +I+ Sbjct: 166 IEDYMARGGYTSLAKVLSGMDRKEIIEQIKAAGLRGRGGGGFPTGLKWEAAYNSKG-DIK 224 Query: 86 YLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRR 145 Y++CNADE +PG + +R L+E+ PH ++EGM+I+A+ + A +GY ++R EY A + Sbjct: 225 YVVCNADEGDPGAFMNRTLLERDPHSVLEGMIIAAYTIGAQKGYAYIRAEYPIAVEMFNK 284 Query: 146 AIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPA 205 AI +A E GLLG+NI+GT F FEL+V GAG ++CGEETAL+ S+EG+R PR +PPFPA Sbjct: 285 AIEDAKEYGLLGENILGTDFSFELYVKEGAGAFVCGEETALLASIEGKRGVPRPRPPFPA 344 Query: 206 TSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELP 265 SG WGKPT +NNVE+ NVP I+ +GVE Y+ K GTK+ +G +K G+ E+ Sbjct: 345 QSGLWGKPTLINNVESYANVPKIIRDGVENYRKRGVEKSPGTKMFSVTGPLKLTGIIEIQ 404 Query: 266 FGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTAL 325 FGTT R IL++ GG +G K KA Q GG L E DLP++++++ G+ +G+ Sbjct: 405 FGTTLRYILDNICGGTSNGQKIKAIQIGGPSGACLPEELFDLPLDYDTLKSVGAMVGSGG 464 Query: 326 AMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLE 385 +A+ + MV + R +F RESCG C PCR+G + IL +G+ D+ETLE Sbjct: 465 IVAITEDRCMVEVARFFLDFTKRESCGKCVPCREGTTQAYNILEKFTQGKATYEDLETLE 524 Query: 386 QLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEF 419 QL + + C A P+ S +KYF+ E+ Sbjct: 525 QLSEIIKTA-SLCGLGKTAPNPIISTLKYFKNEY 557 >UniRef50_D2BG77 [Fe] hydrogenase, HymB subunit n=6 Tax=cellular organisms RepID=D2BG77_DEHSV Length = 417 Score = 330 bits (846), Expect = 7e-89, Method: Compositional matrix adjust. Identities = 173/400 (43%), Positives = 255/400 (63%), Gaps = 8/400 (2%) Query: 26 LDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIR 85 +D Y + GY+ +KAL+ ++P+E++ +VK + L GRGGA F TGLKW L K E N + Sbjct: 19 IDVYLADGGYQALKKALS-MTPEEVIAEVKRSKLVGRGGAAFPTGLKWELTRK-EKANPK 76 Query: 86 YLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRR 145 Y++CNA E EPGT+KDRL+++ PH+++EG +I+A+A+ +G+I R Y E ++ Sbjct: 77 YIVCNASEGEPGTFKDRLILKNDPHMVLEGFIIAAYAVGTSQGFIHAREVYTEEIELFQK 136 Query: 146 AIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPA 205 AI +ATE G LG+NIMG+ F ++ + AG YICGEETAL SLEG R P ++PP+P Sbjct: 137 AIDQATERGFLGQNIMGSNFSLDIQFYKSAGAYICGEETALFESLEGHRGIPAARPPYPV 196 Query: 206 TSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELP 265 G KPT VNNVETLCNVPAI+ NG +W+ +I GTKL SG VK PG++E+P Sbjct: 197 QVGLMDKPTTVNNVETLCNVPAIINNGADWFASIGHPDYPGTKLFCLSGNVKEPGVFEMP 256 Query: 266 FGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTAL 325 GT +++LE AGG DG KFKA PGG + LTE D+ ++F+++ KAG+ LG+ Sbjct: 257 LGTNLKDLLE--AGGGVDG-KFKAVLPGGISSSLLTET--DISLDFKTLAKAGTMLGSGA 311 Query: 326 AMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLE 385 + ++ + +MV++ N+ FF E CG C+ CR+G + +IL RG+G ++E L Sbjct: 312 VIVINSDTSMVNVASNVAHFFDEEGCGKCSICREGTRRAAEILSRFSRGQGNRNELEWLL 371 Query: 386 QLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 +L + + C A+ SAI+ F+ EF A +++ Sbjct: 372 ELHEVMKDTAS-CGLGQVALNVAASAIRNFKGEFLAQVRK 410 >UniRef50_A8GM77 NADH-quinone oxidoreductase subunit F n=17 Tax=Proteobacteria RepID=NUOF_RICAH Length = 423 Score = 328 bits (842), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 169/387 (43%), Positives = 242/387 (62%), Gaps = 3/387 (0%) Query: 40 KALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTY 99 KAL D I+ ++K +GL+GRGGAGFSTG+KWS MPK+ S YL+ NADE EPGT Sbjct: 33 KALLDKGRDFIIEEIKKSGLRGRGGAGFSTGMKWSFMPKN-SEKPCYLVVNADESEPGTC 91 Query: 100 KDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKN 159 KDR ++ PH L+EG L+++FA+ A YI++RGE+ A N++RA+ EA + L+GKN Sbjct: 92 KDRDILRFEPHKLIEGCLLASFAIGANNCYIYIRGEFYNEASNIQRALDEAYKDRLIGKN 151 Query: 160 IMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNV 219 G+GFD +++H GAG YICGEETAL+ SLEG++ PR KPPFPA G +G PT +NNV Sbjct: 152 ACGSGFDCNIYLHRGAGAYICGEETALLESLEGKKGMPRLKPPFPAGFGLYGCPTTINNV 211 Query: 220 ETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAG 279 E++ VP IL W+ +I K + GTK+ SG V P E G + +E++E YAG Sbjct: 212 ESIAVVPTILRRRASWFASIGKPNNTGTKIFCISGHVNKPCNVEEAMGISLKELIEKYAG 271 Query: 280 GMRDGL-KFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSL 338 G+R G KA PGG+ L ++ ++ M+F+S+ GS LGT + +D +++ Sbjct: 272 GVRGGWDNLKAIIPGGSSVPLLPKSLCEVDMDFDSLRTVGSGLGTGGIIVMDKSTDIIYA 331 Query: 339 VRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFC 398 + L +F+ ESCG CTPCR+G W +++ L +G + +I+ L + + + G T C Sbjct: 332 IARLSKFYMHESCGQCTPCREGTGWMWRVMIRLVKGNAKKSEIDELLNVTKEI-EGHTIC 390 Query: 399 AHAPGAVEPLQSAIKYFREEFEAGIKQ 425 A A P+Q I++FR E E IK Sbjct: 391 ALGDAAAWPIQGLIRHFRSEIEDRIKS 417 >UniRef50_Q39QB2 NADH dehydrogenase I, F subunit n=5 Tax=Bacteria RepID=Q39QB2_GEOMG Length = 591 Score = 327 bits (837), Expect = 7e-88, Method: Compositional matrix adjust. Identities = 169/402 (42%), Positives = 247/402 (61%), Gaps = 2/402 (0%) Query: 22 QPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDES 81 P LD Y +++G++ K + ++P ++++VK AGL+GRGG GF TG+KWS Sbjct: 123 DPESLDAYLAEDGFKAIEKCVKEMTPAAVIDEVKKAGLRGRGGGGFPTGMKWSFCAATPG 182 Query: 82 MNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAV 141 ++YL+CNADE +PG + DR ++E P+ ++EGM+I+A+A+ +GY+++R EY A Sbjct: 183 -KLKYLICNADEGDPGAFMDRSILEGDPYCIIEGMMIAAYAIGCSKGYVYVRAEYPLAIE 241 Query: 142 NLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKP 201 L++A+ E G LG NI G GFDF+L + GAG ++CGEETAL+ S+EG R PR +P Sbjct: 242 RLQKALDVCREKGYLGHNIQGWGFDFDLIIKKGAGAFVCGEETALMASIEGERGMPRPRP 301 Query: 202 PFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGL 261 PFPA G W KPT +NNVET NV I+ G EWY ++ GTK+ +G+VK+ GL Sbjct: 302 PFPAVKGLWAKPTNINNVETFANVRHIINKGAEWYASLGTDTTKGTKIFAVTGKVKHTGL 361 Query: 262 WELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRL 321 E+P G T R+++ + GG+ + KFKA Q GG + LD P++++S+ KAG+ + Sbjct: 362 VEVPAGMTVRDVIYNVCGGIANNRKFKAVQAGGPSGGCIPPEVLDTPVDYDSLIKAGAMM 421 Query: 322 GTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDI 381 G+ + +D MV + R F ESCG C PCR GL + IL + G GQ GDI Sbjct: 422 GSGGLVVMDETTCMVDVARFFLSFTRMESCGKCVPCRIGLKVMLDILERITAGRGQAGDI 481 Query: 382 ETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGI 423 ETL ++ + + C A P+ S I+YFREE+EA I Sbjct: 482 ETLLEMGSTIKKA-SLCGLGQTAPNPILSTIRYFREEYEAHI 522 >UniRef50_C9RJK0 NADH dehydrogenase (Quinone) n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJK0_FIBSS Length = 435 Score = 326 bits (836), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 171/401 (42%), Positives = 243/401 (60%), Gaps = 4/401 (0%) Query: 26 LDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIR 85 ++ Y+ GY + L +S E+++ V+ + L+GRGGAGF TG+KWS +P+ + Sbjct: 19 IEVYKKLGGYSNISERLFNMSQFELIDYVQRSNLRGRGGAGFPTGMKWSFVPRGTGKPV- 77 Query: 86 YLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRR 145 Y++ NADE E GT+KD LM + PH L+EG++I+A+AL + YI+ RGE++ L + Sbjct: 78 YIVVNADEGEGGTFKDHFLMLEDPHRLIEGLIIAAWALGSRAAYIYCRGEFLPCIEALNK 137 Query: 146 AIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPA 205 A+ +A AG LG+NI GT F F++FVH GAG YICGEETALINSLEG++ PR KPPFPA Sbjct: 138 ALNQAYAAGYLGENICGTKFSFDIFVHRGAGAYICGEETALINSLEGQKGQPRLKPPFPA 197 Query: 206 TSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELP 265 GAW PTCVNNVET+ ++P IL++ Y + + GTK+ SG VKNPG++E P Sbjct: 198 VCGAWKSPTCVNNVETIMSLPWILSHDPSDYAKMGTPRAGGTKVFCISGDVKNPGVYEAP 257 Query: 266 FGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLT-EAHLDLPMEFESIGKAGSRLGTA 324 GT ++ DYAGG+ G K KA PGG+ LT E M++E + + G+ Sbjct: 258 LGTPMMTMINDYAGGVVGG-KLKAVLPGGSSCAPLTAEEAAVATMDYECLASMKTMFGSG 316 Query: 325 LAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETL 384 + ++ NMV L+ L F++ ESCG CTPCR+G +IL + G G GD+E + Sbjct: 317 AMIVINDTHNMVDLLNCLGNFYSHESCGQCTPCREGTGLLHRILNQMVAGNGHDGDVELM 376 Query: 385 EQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 + L G G T C + P+ S FR +F+ I + Sbjct: 377 QSLSSGFG-GVTICPLSISLGGPVSSYTAKFRADFDEYIAK 416 >UniRef50_O27592 NADP-reducing hydrogenase, subunit C n=5 Tax=cellular organisms RepID=O27592_METTH Length = 630 Score = 326 bits (835), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 167/403 (41%), Positives = 247/403 (61%), Gaps = 4/403 (0%) Query: 22 QPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDES 81 P + Y + GY G +AL + PDE++ +VKD+GL+GRGGAGF T LKWSL + E+ Sbjct: 144 DPENMGHYLATGGYRGLMRALE-MEPDEVIEEVKDSGLRGRGGAGFPTWLKWSLC-RQEA 201 Query: 82 MNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAV 141 ++YL+CNADE +PG + +R L+E PH L+EG+LI+++A+ A YI+ R EY A Sbjct: 202 SEVKYLICNADEGDPGAFMNRSLIEGDPHALLEGILIASYAVGAREAYIYCRAEYPLALE 261 Query: 142 NLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKP 201 LR AI++ GLLGK+I+G+GFD ++ + GAG ++CGEETALI+S+EG+R PR++P Sbjct: 262 RLRVAISDLRNLGLLGKDILGSGFDLDIKIKEGAGAFVCGEETALISSIEGKRGMPRTRP 321 Query: 202 PFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGL 261 PFP T G WGKPT +NNVETL V I+ +G +++ ++ + GTK G V+ GL Sbjct: 322 PFPTTRGLWGKPTVINNVETLAAVSMIMQHGADYFNSLGTPESRGTKTFSLVGDVRRTGL 381 Query: 262 WELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRL 321 E+P GTT RE++ D GG+ DG + KA Q GG L +D ++++S+ AG+ + Sbjct: 382 IEVPLGTTLREVIFDIGGGVVDG-ELKAVQIGGPSGGCLPAELIDTGIDYDSLTSAGAIM 440 Query: 322 GTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDI 381 G+ + + MV L R EF RESCG C PCR G + IL + G G+P D Sbjct: 441 GSGGLVVLSDRTCMVELARYFLEFTQRESCGKCVPCRVGTRQMLMILNDIVEGSGRPEDP 500 Query: 382 ETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIK 424 + L + + + C + P+ + ++YF +E+ IK Sbjct: 501 DILRDVAESV-RAASLCGLGQTSPNPVLTTLRYFEDEYHDHIK 542 >UniRef50_D0LZ02 NADH-quinone oxidoreductase, F subunit n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LZ02_HALO1 Length = 445 Score = 325 bits (833), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 180/417 (43%), Positives = 251/417 (60%), Gaps = 28/417 (6%) Query: 29 YRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLL 88 Y + GY A++AL G++ ++I+ +VK + L+GRGGAGF TG+KW +P S ++ +L+ Sbjct: 25 YETLGGYAVAKRAL-GMAREQILAEVKASNLRGRGGAGFPTGVKWGFVPAG-SKDV-HLV 81 Query: 89 CNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIA 148 CNADE EPGT KDR L+ PH L+EGM++SA AL A YI++RGE + + L+ A+ Sbjct: 82 CNADESEPGTCKDRELLFWDPHRLIEGMIVSAHALGAVHNYIYIRGEMMREVLVLQDAVR 141 Query: 149 EATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSG 208 EA E G LG NI GTG L VH GAG YICGEETAL+NSLEG R PR KPPFPA G Sbjct: 142 EAYERGYLGDNIFGTGKACHLTVHRGAGAYICGEETALLNSLEGLRGQPRLKPPFPAVKG 201 Query: 209 AWGKPTCVNNVETLCNVPAILANGVEWYQNISK--SKDAGTKLMGFSGRVKNPGLWELPF 266 +G PT VNNVETL NVP I+ G W+ + + GT+++ SG V+ PG++ELP Sbjct: 202 LFGNPTVVNNVETLMNVPTIIDKGGAWFAALGPEGGRSGGTRIVCVSGHVEKPGVYELPM 261 Query: 267 GTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESI------------ 314 T +++++ GG+ G K KA PGG+ LT LD+P+EF+++ Sbjct: 262 TITFNQLIDEVCGGVWKGRKVKAVIPGGSSMPPLTAEELDVPIEFDALMTDERIRPVEVL 321 Query: 315 ---------GKAGSRL-GTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWS 364 G+A + G+ + +D ++V + +F+A ESCG CTPCR+G W Sbjct: 322 RGQQFDMGGGRALRTMAGSGGIVVMDDHTDVVKACWRIMKFYAHESCGQCTPCREGTGWL 381 Query: 365 VKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEA 421 +I R + G G+PGDI+ L Q+ + G + CA A P+ I FR+EFEA Sbjct: 382 EQICRRVAHGGGKPGDIDLLAQISHGIA-GNSICALGEAAAWPMMGFITKFRDEFEA 437 >UniRef50_Q2FP97 NADH dehydrogenase (Quinone) n=2 Tax=Methanomicrobiales RepID=Q2FP97_METHJ Length = 562 Score = 325 bits (833), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 171/412 (41%), Positives = 240/412 (58%), Gaps = 4/412 (0%) Query: 11 HPLTWRLRDDK--QPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFS 68 H LRD P +DEY GY A KALT + PD I+++VK +GL+GRGGAGF Sbjct: 146 HQKKVILRDSGLINPEDIDEYIGIGGYFAAYKALTSMKPDAIIDEVKRSGLRGRGGAGFP 205 Query: 69 TGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRG 128 GLKW + K ++++CNADE +PG Y +R ME PH+L+EGMLI A+A+ G Sbjct: 206 AGLKWEITKKAPGEE-KFIVCNADEGDPGAYMNRNEMESDPHMLLEGMLIGAYAMGVSEG 264 Query: 129 YIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALIN 188 I++R EY A L A+ +A GLLGKNI TGFDF++ + TGAG ++CGE TAL Sbjct: 265 LIYIRAEYPLAIERLMLALDQARTYGLLGKNIFNTGFDFDIRIATGAGAFVCGESTALAA 324 Query: 189 SLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTK 248 S+EG+ PR +PP G +GKPT +NNVET CNVP I+A G WY +I + GTK Sbjct: 325 SIEGKTGRPRLRPPRLTEKGVFGKPTDLNNVETWCNVPVIIAKGALWYSSIGAKGNTGTK 384 Query: 249 LMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLP 308 + G+V N G+ E+P GT+ I+ D G G + KA Q GG + D P Sbjct: 385 VFSLVGKVDNIGMVEVPLGTSLHSIIYDIGNGGALGKEVKAVQTGGPSGGCIPVRLFDTP 444 Query: 309 MEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKIL 368 ++FES+ + G+ +G+ + +D + NMV + R F + ESCG C PCR+GL + IL Sbjct: 445 VDFESLNQVGTMMGSGGLVVMDEDTNMVDIARYFINFASGESCGKCVPCREGLKHMLLIL 504 Query: 369 RALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFE 420 + G+G DI L +L + + C A P+ + ++YF+EE++ Sbjct: 505 NRIVAGKGTRQDIGLLRELAETV-QKTSLCGLGQTAPNPVLTTMQYFKEEYD 555 >UniRef50_B6ALB9 NADH dehydrogenase (Quinone) n=3 Tax=Leptospirillum RepID=B6ALB9_9BACT Length = 634 Score = 323 bits (828), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 170/399 (42%), Positives = 239/399 (59%), Gaps = 3/399 (0%) Query: 25 WLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNI 84 +L+ YR +GY L + Q++ +G+ GRGG F K + K+ Sbjct: 199 YLERYREDHGYRALESLLKTGDAEAAFEQIRLSGVAGRGGGAFPMYRKLDAVRKNPPP-- 256 Query: 85 RYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLR 144 RYL+CNADE EPGT+KDR +ME+ PH L+EGM I+A + A G+I+LR EY + L Sbjct: 257 RYLVCNADEGEPGTFKDRYIMERDPHSLIEGMAIAARIIGAEEGFIYLRSEYPHSFHILE 316 Query: 145 RAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFP 204 +AIAEA AGLLG I+G+ F F L ++ GAG YICGEET+LINSLEG+RA PR+KPP Sbjct: 317 KAIAEARNAGLLGPRILGSDFSFRLRLYRGAGAYICGEETSLINSLEGKRAYPRNKPPHL 376 Query: 205 ATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWEL 264 + G WGKPT NVETL N+P+IL NG +WY + K GTKL SG + PGL+E+ Sbjct: 377 SEVGLWGKPTEEQNVETLANLPSILRNGGDWYARLGDVKSPGTKLFCLSGHIARPGLYEI 436 Query: 265 PFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTA 324 P G + R ++ED GG+ G K P G+ + L HLDL +++ SI + G+ LG+A Sbjct: 437 PLGMSLRSLIEDLGGGIPGGRSLKGLLPAGSASKMLLPRHLDLSLDYPSIAEVGAFLGSA 496 Query: 325 LAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETL 384 + +D + MV L + F ESCG CTPCRDG +IL + +GEG+P ++ L Sbjct: 497 SVIVMDDSVCMVDLAYWIAAFSHHESCGQCTPCRDGTEDVYEILLKIIQGEGKPAYLDLL 556 Query: 385 EQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGI 423 + + ++ + C A S+++YF +E++A I Sbjct: 557 KSIGTYMREA-SICGLGQSAPNIPLSSMEYFEDEWKAHI 594 >UniRef50_P49821 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=426 Tax=cellular organisms RepID=NDUV1_HUMAN Length = 464 Score = 322 bits (826), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 166/376 (44%), Positives = 237/376 (63%), Gaps = 3/376 (0%) Query: 47 PDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLME 106 PD I+ ++K +GL+GRGGAGF TGLKWS M K +YL+ NADE EPGT KDR ++ Sbjct: 73 PDWILGEIKTSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREILR 132 Query: 107 QLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFD 166 PH L+EG L+ A+ A YI++RGE+ A NL+ AI EA EAGL+GKN G+G+D Sbjct: 133 HDPHKLLEGCLVGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYD 192 Query: 167 FELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVP 226 F++FV GAG YICGEETALI S+EG++ PR KPPFPA G +G PT V NVET+ P Sbjct: 193 FDVFVVRGAGAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSP 252 Query: 227 AILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGL- 285 I G W+ + +++GTKL SG V +P E +E++E +AGG+ G Sbjct: 253 TICRRGGTWFAGFGRERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWD 312 Query: 286 KFKAWQPGGAGTDFLTEAHLD-LPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEE 344 A PGG+ T + ++ + + M+F+++ +A + LGTA + +D ++V + L E Sbjct: 313 NLLAVIPGGSSTPLIPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIE 372 Query: 345 FFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGA 404 F+ ESCG CTPCR+G+ W K++ RG+ +P +I++L ++ + + G T CA GA Sbjct: 373 FYKHESCGQCTPCREGVDWMNKVMARFVRGDARPAEIDSLWEISKQI-EGHTICALGDGA 431 Query: 405 VEPLQSAIKYFREEFE 420 P+Q I++FR E E Sbjct: 432 AWPVQGLIRHFRPELE 447 >UniRef50_A1VM65 NADH-quinone oxidoreductase, F subunit n=162 Tax=Proteobacteria RepID=A1VM65_POLNA Length = 473 Score = 321 bits (823), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 179/417 (42%), Positives = 254/417 (60%), Gaps = 9/417 (2%) Query: 26 LDEYRSKNGYEGARKAL-----TGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDE 80 L +Y S+ GY+ RK L GL+PD+++ +VK GL+GRGGAGF TGLKWS MP+ + Sbjct: 49 LGDYESRGGYQALRKILGQDGGAGLTPDQVIAEVKAGGLRGRGGAGFPTGLKWSFMPR-Q 107 Query: 81 SMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAA 140 +YL+CN+DE EPGT KDR +M+ PH ++EGM I+A+A+ GY ++ GE Sbjct: 108 FPGQKYLVCNSDEGEPGTCKDRDIMQYNPHSVIEGMAIAAYAMGISVGYNYIHGEIFATY 167 Query: 141 VNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSK 200 A+ EA AGLLG NI+G+ F+F+L G G YICGEET L+ SLEG++ PR K Sbjct: 168 QRFEAALDEARAAGLLGDNILGSNFNFQLHAAHGFGAYICGEETGLLESLEGKKGQPRFK 227 Query: 201 PPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPG 260 PPFPA+ G +GKPT +NN ET VP I+ NG Y K + GTK+ SG V+ PG Sbjct: 228 PPFPASFGLYGKPTTINNTETFAAVPWIIRNGGAAYLECGKPNNGGTKIYSVSGDVELPG 287 Query: 261 LWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFL-TEAHLDLPMEFESIGKAGS 319 +E+P GT ++LE AGG+R G KA PGG+ + L + ++ M+++SI KAGS Sbjct: 288 NYEVPMGTPFAKLLE-LAGGVRKGRTLKAVIPGGSSSPVLPASSMMECTMDYDSIAKAGS 346 Query: 320 RLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPG 379 LG+ + +D MV ++ L F+ ESCG CTPCR+G W +++ + G G+ Sbjct: 347 MLGSGAVIVMDDSRCMVESLKRLSYFYMHESCGQCTPCREGTGWLWRVVDRIHNGLGRQS 406 Query: 380 DIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLINGI 436 D++ L + + G+T CA A P+++ IK++R EFEA I + S G+ Sbjct: 407 DLDLLNSVADNI-QGRTICALGDAAAMPVRAMIKHYRHEFEAMIPKNTSQVAASKGV 462 >UniRef50_A1ALP4 NADH dehydrogenase (Quinone) n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALP4_PELPD Length = 427 Score = 320 bits (821), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 165/401 (41%), Positives = 243/401 (60%), Gaps = 4/401 (0%) Query: 26 LDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIR 85 L Y+ + GY+ AL L P ++ +V +GL+GRGGAGF TG KWS + K + Sbjct: 19 LKAYQGRGGYQALENALKTLQPIDVEKEVMASGLRGRGGAGFPTGSKWSFVNKKAP--VV 76 Query: 86 YLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRR 145 YL CNADE EPGT+KDR + E H L+EGM+++A+AL +I++RGE+ + L Sbjct: 77 YLCCNADEGEPGTFKDRWIFEHNSHQLIEGMILAAYALNVRNAFIYIRGEFDLSFRRLMD 136 Query: 146 AIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPA 205 A++EA +AG LG+NI+G+ F ++ V G G Y+CGEE++L S+EG + PR+KPPFPA Sbjct: 137 AMSEAYKAGYLGENILGSSFSCDIRVMQGGGAYVCGEESSLYTSIEGFKGYPRNKPPFPA 196 Query: 206 TSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELP 265 G + PT VNNVETL NVP I+ NG + + + K GTK+ G SG VK PGL+ELP Sbjct: 197 VQGLYKAPTVVNNVETLANVPWIMTNGAKAFSAMGTEKHPGTKIFGVSGHVKKPGLYELP 256 Query: 266 FGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLP-MEFESIGKAGSRLGTA 324 G ++++ + GG+ +G + KA PGG+ T L ++ ++ E + + LG+ Sbjct: 257 LGYPLKKLIFEECGGILNGKELKAVIPGGSSTPILLPQDVETANLDAECLSTYRTMLGSG 316 Query: 325 LAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETL 384 + + + MV L+ L F+A ESCG CTPCR+G W I+ + G+G GD+E+L Sbjct: 317 GVIVIAEGVCMVRLLHTLSRFYAHESCGQCTPCREGSAWMNDIISRIVAGKGVKGDLESL 376 Query: 385 EQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 E++ + + G T CA A P+ + I FR EF+ I+ Sbjct: 377 ERITKGI-MGNTVCALGDAASMPVINFITKFRAEFDYYIEH 416 >UniRef50_Q9ZBV8 Putative respiratory chain oxidoreductase n=4 Tax=Streptomyces RepID=Q9ZBV8_STRCO Length = 646 Score = 318 bits (815), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 171/352 (48%), Positives = 216/352 (61%), Gaps = 9/352 (2%) Query: 22 QPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDES 81 P LD+YR+ GY R+A L P ++ +V DAGL GRGGA F TG KW + Sbjct: 254 DPTSLDDYRAHGGYTALRRAF-ALGPAAVIREVTDAGLVGRGGAAFPTGRKWQATAA-QP 311 Query: 82 MNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAV 141 + YL+CNADE EPGT+KDR+LME P+ LVE M I+A+A A+RGY++LRGEY A Sbjct: 312 DHPHYLVCNADESEPGTFKDRVLMEGDPYALVEAMTIAAYATGAHRGYLYLRGEYPRALA 371 Query: 142 NLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKP 201 L AI +A GLLG +++G G+ F++ + GAG YICGEETAL NS+EGRR PRSKP Sbjct: 372 RLTHAIEQARTRGLLGDDVLGQGYAFDIEIRRGAGAYICGEETALFNSIEGRRGEPRSKP 431 Query: 202 PFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGL 261 PFP G +GKPT NNVETL NV IL G E Y I G KL SG V PG+ Sbjct: 432 PFPVEKGLFGKPTVENNVETLVNVLPILTMGAEAYAAIGTPTSTGPKLFCVSGTVARPGV 491 Query: 262 WELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRL 321 +ELPFG T E+L G+RD L +A GGA F+ LD+P+ FE +AG+ L Sbjct: 492 YELPFGATLGELLA--LAGVRDNL--RAVLLGGAAGGFVRPDELDIPLTFEGTREAGTTL 547 Query: 322 GTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALER 373 G+ + MA D + + L+ + EFF ESCG C PCR G +V+ AL R Sbjct: 548 GSGVVMAFDDTVPLPRLLLRIAEFFRDESCGQCVPCRVG---TVRQEEALHR 596 >UniRef50_Q0AYU9 NADH dehydrogenase (Quinone) n=4 Tax=Bacteria RepID=Q0AYU9_SYNWW Length = 408 Score = 317 bits (813), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 161/407 (39%), Positives = 237/407 (58%), Gaps = 13/407 (3%) Query: 19 DDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPK 78 D P ++Y G++G KA G++ +++ +VK +GL+GRGGAGF+ G+KWS +P Sbjct: 13 DQIDPAQAEDYIKVGGFKGLEKA-RGMTSKDLIEEVKKSGLRGRGGAGFNAGMKWSFVPP 71 Query: 79 DESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIE 138 E ++Y++CN DE EPGTYKDR++ E+ L+EGM I A+ A +GYI+ RGEY Sbjct: 72 AE---VKYVVCNLDEGEPGTYKDRIICEKNAQALIEGMAICGVAINAKQGYIYCRGEYPF 128 Query: 139 AAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPR 198 LR+AI A + G LG +F++ V GAG Y+CGEETALI S+EG R PR Sbjct: 129 VVDLLRKAIQSAKDVGALG--------EFDIEVRMGAGAYVCGEETALIESIEGHRGEPR 180 Query: 199 SKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKN 258 KPPFP +G WG PT VNNVET +P IL NG +W+ +I K GTK++ +G V N Sbjct: 181 FKPPFPGVAGLWGVPTVVNNVETFACLPYILTNGADWFASIGAPKYPGTKVLTLTGDVNN 240 Query: 259 PGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAG 318 P +E+P +++ GG+++G KFKA Q GG F+ E +L+ ++F+S+ G Sbjct: 241 PTYFEVPTNYILSDVIYKLGGGIKNGRKFKAVQVGGTSGAFIPEQNLNTSIDFDSMSAIG 300 Query: 319 SRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQP 378 + LG+ + +D ++V +V + +FF ESCG C PCR+G +I+ + G Sbjct: 301 AALGSGAVLVMDETRDIVDIVTRISKFFEHESCGKCNPCREGTFRCREIMEKINSGRATE 360 Query: 379 GDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 DI+ L L R + C A P+ S I++F E+ + Q Sbjct: 361 ADIDNLLLLARVMKRA-ALCGLGQAAPVPITSTIEHFGHEYRRKLLQ 406 >UniRef50_C6SUV8 MIP04331p (Fragment) n=3 Tax=Drosophila melanogaster RepID=C6SUV8_DROME Length = 704 Score = 315 bits (807), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 166/378 (43%), Positives = 231/378 (61%), Gaps = 3/378 (0%) Query: 50 IVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLP 109 IVN++K +GL+GRGGAGF +GLKWS M K ++L+ NADE EPGT KDR +M P Sbjct: 301 IVNEIKTSGLRGRGGAGFPSGLKWSFMHKPPDGRPKFLVVNADEGEPGTCKDREIMRHDP 360 Query: 110 HLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFEL 169 H LVEG LI+ A+ A G+I++RGE+ A NL+ AI EA +AG LGKN G+GFDF+L Sbjct: 361 HKLVEGCLIAGRAMGANTGFIYIRGEFYNEACNLQYAIIEAYKAGYLGKNACGSGFDFDL 420 Query: 170 FVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAIL 229 +V GAG YICGEET+LI SLEG+ PR+KPPFPA G +G P+ V NVET+ P I Sbjct: 421 YVQRGAGAYICGEETSLIESLEGKAGKPRNKPPFPADIGVFGCPSTVTNVETVAVSPTIC 480 Query: 230 ANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGL-KFK 288 G W+ + +++++GTKL SG V NP E RE++E +AGG+ G Sbjct: 481 RRGGNWFASFGRTRNSGTKLFNISGHVCNPCTVEEEMSMPTRELIERHAGGVIGGWDNLL 540 Query: 289 AWQPGGAGTDFLTEAHLDLPM-EFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFA 347 A PGG+ T +T+ H + +++ + S +GT + ++ + +++ + L F+ Sbjct: 541 AIIPGGSSTPCITKEHASSAIHDYDGLMAVRSSMGTGALIVMNKDTDIIKAIARLSAFYK 600 Query: 348 RESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEP 407 ESCG CTPCR+GL W I+ G+ Q +I+ L +L + + G T CA A GA P Sbjct: 601 HESCGQCTPCREGLHWVNMIMHRFVTGQAQIAEIDMLFELTKQI-EGHTICALADGAAWP 659 Query: 408 LQSAIKYFREEFEAGIKQ 425 Q I+ FR E IK+ Sbjct: 660 PQGLIRNFRPVIEERIKK 677 >UniRef50_B6JB78 NADH dehydrogenase i chain f n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JB78_OLICO Length = 620 Score = 313 bits (801), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 171/395 (43%), Positives = 234/395 (59%), Gaps = 8/395 (2%) Query: 22 QPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDES 81 P +D+Y + +GY G R+A + P +++ +VKD+ L GRGGA F G+KW K + Sbjct: 218 DPESIDDYLATDGYAGLRRAFE-MEPAQVITEVKDSRLMGRGGAAFPAGIKWESTAK-QP 275 Query: 82 MNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAV 141 RYL+CNADE EPGT+KDR ++E P L+E M I+ +A+ A RGYI+LRGEY A Sbjct: 276 ATPRYLVCNADESEPGTFKDRSILEGDPFALIESMTIAGYAIGAERGYIYLRGEYPRAYR 335 Query: 142 NLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKP 201 L AI +A E G LG+NI G G+ FEL + GAG YICGEETA+ NS+EG R PR+KP Sbjct: 336 MLSNAIEKARERGFLGENIQGKGWSFELEIRRGAGAYICGEETAIFNSIEGYRGEPRTKP 395 Query: 202 PFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGL 261 PFP +G +GKPT VNNVETLCNVP I+ G Y I G KL SG + PG+ Sbjct: 396 PFPFEAGLFGKPTVVNNVETLCNVPLIMQLGGAEYAKIGTEGSTGPKLFCVSGNLVRPGV 455 Query: 262 WELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRL 321 +E+PFG T +ILE AGG+ G K +A GGA F+ LD+P+ FE + A + L Sbjct: 456 YEVPFGATLGDILE-LAGGVPQGRKLQAVLLGGAAGVFVRADELDIPLTFEGVRAAKATL 514 Query: 322 GTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDG-LPWSVKILRALERG---EGQ 377 G+ + +A D +++ ++ + FF ESCG C PCR G + +LR + G + + Sbjct: 515 GSGVVLAFDDTVDLSGILLRIASFFRDESCGQCVPCRVGTVRQEEALLRIMHNGHDAKAK 574 Query: 378 PGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAI 412 DI L + + + C A ++SAI Sbjct: 575 GNDIHILRDVGLVM-KDASICGLGQAAWNAVESAI 608 >UniRef50_C7NU21 NADH dehydrogenase (Quinone) n=5 Tax=cellular organisms RepID=C7NU21_HALUD Length = 634 Score = 311 bits (798), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 167/398 (41%), Positives = 246/398 (61%), Gaps = 3/398 (0%) Query: 22 QPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDES 81 P L+EY +++GY ++L+ SP+E++ +VK++ L+GRGG GF TG+KW + +++ Sbjct: 159 DPESLEEYVARDGYFALWESLSAGSPEEVIEEVKESNLRGRGGGGFPTGMKWEFLAGNDA 218 Query: 82 MNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAV 141 +++YL+CNADE +PG Y DR L+E P+ ++EGM I+ +AL A +GYI++R EY A Sbjct: 219 -DLKYLICNADEGDPGAYMDRTLLESDPYAVLEGMTIAGYALGAEKGYIYVRAEYPLAIE 277 Query: 142 NLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKP 201 L+ AI +A EAGLLG++I G GFDF+L + GAG ++CGEETA+INSLEG R P+ +P Sbjct: 278 RLQHAIEQAREAGLLGQDIFGEGFDFDLEIKKGAGAFVCGEETAMINSLEGGRGMPKPRP 337 Query: 202 PFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGL 261 P+PA G W +PT VNNVET NVPAIL NG EW+ +I + GTK+ +G V+N GL Sbjct: 338 PYPADEGLWAEPTNVNNVETWANVPAILRNGAEWFADIGTEESGGTKVFSVTGDVENTGL 397 Query: 262 WELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRL 321 E+P GT E++ + GG G +FKA Q GG + H + P+++E++ + GS + Sbjct: 398 VEVPLGTRLEEVVFEIGGGTT-GGEFKAVQTGGPSGGVIPREHAETPIDYETLMELGSMM 456 Query: 322 GTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDI 381 G+ + +D MV R EF ESCG C PCR G +++L + G P I Sbjct: 457 GSGGMIVMDESTCMVDQSRFFLEFSVDESCGKCPPCRYGTKQMLEMLEGITNGAADPDVI 516 Query: 382 ETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEF 419 L L + + C A P+ S + YF +E+ Sbjct: 517 SELRSLGDSM-EEMSLCGLGQTAANPVMSTLDYFEDEY 553 >UniRef50_C1YSE4 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit n=4 Tax=Actinomycetales RepID=C1YSE4_NOCDA Length = 656 Score = 310 bits (793), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 159/339 (46%), Positives = 214/339 (63%), Gaps = 3/339 (0%) Query: 22 QPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDES 81 P+ LD+YR+ GY R+AL L P ++ +V D+GL GRGGA F TG KW + + Sbjct: 242 DPLSLDDYRAAGGYAALRRALR-LGPAGVIREVSDSGLVGRGGAAFPTGRKWQATAQ-QP 299 Query: 82 MNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAV 141 YL+CNADE EPGT+KDR+LME P +VE M I+ +A+ A GY+++RGEY A Sbjct: 300 DGPHYLVCNADESEPGTFKDRVLMEGDPFSVVEAMTIAGYAVGARTGYLYIRGEYPRALR 359 Query: 142 NLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKP 201 +L A+A A GLLG +I+G+GF F++ + GAG YICGEETA+ S+EG+R PRSKP Sbjct: 360 HLENAVALARGRGLLGPDILGSGFAFDIEIRRGAGAYICGEETAIFGSIEGQRGEPRSKP 419 Query: 202 PFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGL 261 PFP G +GKPT VNNVETL NV +L G Y + + G KL SG V+ PGL Sbjct: 420 PFPVEKGLFGKPTAVNNVETLVNVLPVLLMGGPAYAAVGTGQSTGPKLFCLSGGVRRPGL 479 Query: 262 WELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRL 321 +ELPFG T R+++E AGGM +G +A GGA F+ LD+P+ FE AG+ L Sbjct: 480 YELPFGATLRDLIE-AAGGMPEGRTIQAVLLGGAAGTFVRGDELDIPLTFEGARAAGTSL 538 Query: 322 GTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDG 360 G+ + + +D ++V+ + + FF ESCG C PCR G Sbjct: 539 GSGVVLVLDDTADLVATLVRVAAFFRDESCGQCVPCRVG 577 >UniRef50_A9EX79 NADH dehydrogenase (Ubiquinone) n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9EX79_SORC5 Length = 450 Score = 306 bits (785), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 173/422 (40%), Positives = 243/422 (57%), Gaps = 26/422 (6%) Query: 26 LDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMP-KDESMNI 84 L Y GY+ A++AL G++ + +V ++K A ++GRGGAGF+ G+KWS MP + Sbjct: 20 LAVYEKGGGYQQAKRAL-GMTREALVEEMKAANIRGRGGAGFAMGVKWSFMPWPPKPERP 78 Query: 85 RYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLR 144 YL+ NADE EPGT+KDR LME+ PH +VEG +I F + A+ YI++R E + L Sbjct: 79 HYLVINADEGEPGTFKDRTLMEKNPHAVVEGCIIGCFGIGAHAAYIYVRDELHLSKARLW 138 Query: 145 RAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFP 204 AI EA G LGK G + E++VHTGAG YICGEET+L+NSLEG+R PR KPPFP Sbjct: 139 GAIEEARAKGYLGKRPFGIDYPVEVYVHTGAGAYICGEETSLLNSLEGKRGEPRLKPPFP 198 Query: 205 ATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISK---SKDAGTKLMGFSGRVKNPGL 261 A GA+G PT VNN+ET+ VP L G E + +S KD G +L G SG V NPG+ Sbjct: 199 AQFGAFGMPTTVNNLETIAAVPTALELGGENFSKLSSLHHLKDGGCRLFGVSGHVNNPGI 258 Query: 262 WELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLT-------------------E 302 +E G T R+++ +Y GG++ G K PGG+ L + Sbjct: 259 FEAAVGVTLRDLIYEYGGGVKHG-KLLGVIPGGSSCPILRADEVVNAPSDKSPLHPWHGQ 317 Query: 303 AHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLP 362 + LD+P+ ++ G+ LGT A+ + + V + NL F+ ESCG CTPCR+G Sbjct: 318 SVLDVPLGVDTFRALGTMLGTCCAIVLSDKACPVLAMHNLMRFYRHESCGQCTPCREGSA 377 Query: 363 WSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAG 422 W +IL + GEG +++ L ++ + G T CA G P ++ FR+EFEA Sbjct: 378 WIHRILDRIVHGEGTIEELDRLHEIADNI-MGNTICAFGEGTAMPALGFLRKFRKEFEAY 436 Query: 423 IK 424 I+ Sbjct: 437 IQ 438 >UniRef50_Q2LQE7 NADH-quinone oxidoreductase chain F n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LQE7_SYNAS Length = 574 Score = 306 bits (784), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 176/409 (43%), Positives = 240/409 (58%), Gaps = 15/409 (3%) Query: 18 RDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMP 77 R K L + Y+ KA T + P+EI+ +VK A L+GRGGAGF G+KW +P Sbjct: 180 RGVKDATALAVAKGNGAYQALAKAGT-MKPEEILEEVKKANLRGRGGAGFPAGVKWGFIP 238 Query: 78 KDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYI 137 KD + YL+CNADE EPGTYKDR +ME PHLL+EGM I+A A+ A + +I++RGE+ Sbjct: 239 KDTDKPV-YLICNADEGEPGTYKDRQIMEYDPHLLIEGMAIAARAIGARQAFIYIRGEFA 297 Query: 138 EAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANP 197 A L +AI EA G L + ++ VH GAG Y+CGEETALI S+EG+R P Sbjct: 298 WIADILEKAIGEAKADGQLS--------ELDIIVHRGAGAYVCGEETALIESIEGKRGQP 349 Query: 198 RSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVK 257 R +PPFPA G +G PT VNNVETL +VP I+ G E ++ + G KL G SG V Sbjct: 350 RIRPPFPAVEGLYGCPTIVNNVETLASVPFIIEKGAEAFKQWGFENNYGFKLFGISGCVN 409 Query: 258 NPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHL-DLPMEFESIGK 316 PG++E P G + E++E AGG++ K KA GG L L DL M+++S K Sbjct: 410 KPGVYEYPLGVSFNELMEA-AGGVKG--KLKAAIVGGLSVAILKAEELQDLTMDYDSCAK 466 Query: 317 AGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEG 376 G+ LG+ M + + ++ L +F+A ESCG C PCR+G VKIL L G+G Sbjct: 467 HGTGLGSGGIMVISEDFSIPELALRTIKFYAHESCGKCVPCREGSYTLVKILHKLLSGQG 526 Query: 377 QPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 + DIE + +C + G T C P+Q+ ++ FR EF+A IK+ Sbjct: 527 EAADIEKILGICNTV-RGLTLCPTGEAFAVPIQAMVEKFRSEFDALIKK 574 >UniRef50_B5IPC7 Formate dehydrogenase, beta subunit n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IPC7_9CHRO Length = 606 Score = 306 bits (783), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 162/411 (39%), Positives = 239/411 (58%), Gaps = 12/411 (2%) Query: 23 PVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESM 82 P +D+ + Y ++ L +P+++ +QVK +GL+GRGGAG+ TGLKW + + Sbjct: 128 PESIDDALAHGSYAQLKRVLLECTPEQVRDQVKRSGLRGRGGAGYPTGLKWDTV-ALQPP 186 Query: 83 NIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVN 142 R ++CNADE +PG + DR ++E PH L+EGM I+AFA+ A +GY+++R EY A Sbjct: 187 GPRTVVCNADEGDPGAFMDRSVLESDPHRLIEGMAIAAFAVGADQGYVYVRAEYPLAIER 246 Query: 143 LRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPP 202 LR A+ +A GLLG I G+ F+ L V GAG Y+CGEETAL+ S++G+R PR +PP Sbjct: 247 LRLALRQARSKGLLGNGIAGSSFNLRLEVRVGAGAYVCGEETALLASIQGQRGTPRPRPP 306 Query: 203 FPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLW 262 FPA G WG PT +NNVETL ++P IL G +WY + GTK+ SG V+ GL Sbjct: 307 FPAQVGLWGAPTLINNVETLASIPVILREGGDWYAAMGTEGSKGTKVFALSGAVERTGLV 366 Query: 263 ELPFGTTAREILEDY----AGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAG 318 E+P GT+ R +++ GG KA Q GG + LD P+++ES+ G Sbjct: 367 EVPMGTSLRTVVQTIGGGVPGGEGPDGGVKAVQTGGPSGGCIPAHLLDTPVDYESLRALG 426 Query: 319 SRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALER---GE 375 S +G+ + + M + R+ F ESCG C PCR G +V++L+ L+R Sbjct: 427 SMMGSGGLVVMGERTAMPEVARHFMRFSVNESCGKCVPCRAG---TVQLLQLLDRFVERR 483 Query: 376 GQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQP 426 GD+E LE LC +G + C A P+ S ++YFR+E++A ++P Sbjct: 484 ASLGDLERLEALCGMVG-ATSLCGLGQAAPNPVLSTLRYFRQEYQAACREP 533 >UniRef50_B8HVQ4 NADH dehydrogenase (Quinone) n=11 Tax=Bacteria RepID=B8HVQ4_CYAP4 Length = 543 Score = 305 bits (780), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 160/402 (39%), Positives = 243/402 (60%), Gaps = 9/402 (2%) Query: 23 PVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSL---MPKD 79 P ++EY + GY+ K L ++P E+V ++ +GL+GRGG G+ TGLKW+ MP D Sbjct: 129 PERIEEYIAVGGYQSLHKVLYEMTPAEVVTEITRSGLRGRGGGGYPTGLKWATVAKMPGD 188 Query: 80 ESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEA 139 + +Y++CN DE +PG + DR ++E PHL++EGM I+ +A+ A G+I++R EY A Sbjct: 189 Q----KYVICNGDEGDPGAFMDRSVLESDPHLVLEGMAIAGYAMGANHGFIYVRAEYPLA 244 Query: 140 AVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRS 199 L++AI +A + GLLG I + FDF++ + GAG ++CGEETALI S+EG R NPR Sbjct: 245 IQRLQKAIQQAKKYGLLGSQIFDSHFDFKIEIRIGAGAFVCGEETALIASIEGGRGNPRP 304 Query: 200 KPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNP 259 +PP+PA G W PT +NNVET N+ I+ G +WY +I K GTK+ +G+++N Sbjct: 305 RPPYPAQFGLWHCPTLINNVETFANIAPIVREGADWYASIGTEKSKGTKIFALTGKIRNN 364 Query: 260 GLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGS 319 GL E+P G + R+I+E+ GG+ +G + KA Q GG + LD P++++S+ GS Sbjct: 365 GLIEVPMGISLRQIVEEMGGGVPEG-QVKAVQTGGPSGGCIPADLLDTPVDYDSLTALGS 423 Query: 320 RLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPG 379 +G+ + +D NMV + EF ESCG C PCR G +L L + P Sbjct: 424 MMGSGGMVVMDESTNMVEVAHFYMEFCRGESCGKCIPCRAGTVQLYGLLTKLLHKQATPA 483 Query: 380 DIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEA 421 D++ L++LC + + C A P+ S ++YF EE+EA Sbjct: 484 DLDKLKELCAMVKE-TSLCGLGMSAPNPVLSTLRYFGEEYEA 524 >UniRef50_B5ICD1 Respiratory-chain NADH dehydrogenase 51 Kd subunit family n=2 Tax=Aciduliprofundum boonei T469 RepID=B5ICD1_9EURY Length = 404 Score = 303 bits (775), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 165/400 (41%), Positives = 239/400 (59%), Gaps = 6/400 (1%) Query: 26 LDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIR 85 +++Y ++ G++ RKAL DEI+ +V+ +GL GRGGA F TGLK + K++S + Sbjct: 10 VEDYLAQGGFKALRKALE-YGQDEIIREVEISGLLGRGGAAFPTGLKMKFVRKEKSTP-K 67 Query: 86 YLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRR 145 Y++ NADE EPGT+KDR+LME+ P+ ++EGM+IS +A+ A +G+ ++R EY E A +++R Sbjct: 68 YIVANADEGEPGTFKDRVLMERNPYQILEGMIISGYAIDAKKGFFYIRYEYKEIAKDIKR 127 Query: 146 AIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPA 205 I E G+LG NI G F F++ + GAG Y+CGEETAL+ S+EG+R PR KPP+PA Sbjct: 128 KIEELRRLGILGPNIYGPKFSFDIELVVGAGAYVCGEETALMESIEGKRGYPRIKPPYPA 187 Query: 206 TSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELP 265 G WGKPT +NNVETL N+P +++ G Y + K G KL SG VKNPG++E Sbjct: 188 QYGLWGKPTLINNVETLANIPIVMSMGGANYSKLGKEGCTGPKLFSVSGFVKNPGVYEAN 247 Query: 266 FGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDF-LTEAHLDLPMEFESIGKAGSRLGTA 324 G + + AGG K K GG F L E HLDLP+ F+ + G LGT Sbjct: 248 LGDKTIGEMIELAGGAEG--KIKGIMLGGGAAGFILNEEHLDLPLCFKDAKERGLFLGTG 305 Query: 325 LAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETL 384 + + + + ++ N+ +FF ESCG C PCR G +I+ + RG+G+ DIE L Sbjct: 306 NIIVFNESVGLWDVLLNISKFFEHESCGQCFPCRYGTKRMREIIEKIVRGDGRKEDIEKL 365 Query: 385 EQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIK 424 R + + C A+ +SA+K F EE I+ Sbjct: 366 NATARAMKIA-SLCPLGASAMLAYESAMKNFHEELMGVIQ 404 >UniRef50_C7M2U2 NADH dehydrogenase (Quinone) n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2U2_ACIFD Length = 432 Score = 301 bits (772), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 169/411 (41%), Positives = 245/411 (59%), Gaps = 14/411 (3%) Query: 26 LDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIR 85 L+ + + +G G R+AL L+P+++ +V +A L GRGGAGF G KWS++ K R Sbjct: 19 LERFLATDGDAGLRRALLELTPEQVHAEVLEANLLGRGGAGFEAGRKWSMLRKAPR---R 75 Query: 86 YLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRR 145 YL+ N DE EP T+KD LL+E+ PH LVEG I+A+A+ A +I+LRGE+ +++ Sbjct: 76 YLVVNGDESEPATFKDHLLVERDPHQLVEGATIAAYAIGASVAFIYLRGEFALGLERVQQ 135 Query: 146 AIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPP-FP 204 AI +A G LG+NI G+GF ++ + GAG YICGEETAL+ SLEG+R PR KPP FP Sbjct: 136 AINDAYARGALGRNIFGSGFSLDIVLQPGAGAYICGEETALLESLEGKRGFPRIKPPYFP 195 Query: 205 ATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWEL 264 A G +G PT VNNVET+ N+P I+ +G ++ + + GT++ SG V+ PG +E+ Sbjct: 196 AVIGLYGAPTIVNNVETVSNLPWIVRHGGAAFRALGAGRSTGTRIFALSGSVRRPGAFEV 255 Query: 265 PF-GTTAREIL--EDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRL 321 T RE++ + Y G+ + +A+ PGG + +L HLDLP+ + + KAGS L Sbjct: 256 EMTSVTFRELIYGDAYGQGLEPDRELRAFIPGGVSSPWLFPEHLDLPLGQDEVAKAGSML 315 Query: 322 GTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDI 381 G+ + +D V + FFARESCG CTPCR+G W ++LR LE G G+ D+ Sbjct: 316 GSGSIIVMDDGDCPVRAAWRIARFFARESCGQCTPCREGGTWIEQVLRRLELGYGREEDL 375 Query: 382 ETLEQLCRFLGPG-------KTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 + L C + PG T C P + +AI+ FR+ F IK+ Sbjct: 376 DLLLDACDNISPGVTWPPAQTTICVLGPSIPPSVVAAIRRFRDVFLTHIKE 426 >UniRef50_B2KCG6 NADH dehydrogenase (Quinone) n=3 Tax=Bacteria RepID=B2KCG6_ELUMP Length = 620 Score = 300 bits (769), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 166/410 (40%), Positives = 238/410 (58%), Gaps = 4/410 (0%) Query: 22 QPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDES 81 P ++EY S GY K L L + + ++K +GL+GRGG GF TGLKW + Sbjct: 150 NPEDINEYISHGGYSALAKCLNELKEEGTIEEIKKSGLRGRGGGGFPTGLKWQFTRASKG 209 Query: 82 MNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAV 141 +Y++CN DE +PG Y DR L+E PH ++EGM+I FA A +G ++R EY A Sbjct: 210 KQ-KYMICNGDEGDPGAYMDRSLLEGNPHAVIEGMIIGGFATGASKGLFYIRAEYPLAIS 268 Query: 142 NLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKP 201 ++ AI A +AGLLGKNI+G+ F ++L + GAG ++CGEETAL+ S+EG+R P KP Sbjct: 269 RVQAAIDAAYKAGLLGKNILGSKFSYDLEIRYGAGAFVCGEETALMRSIEGQRGTPTPKP 328 Query: 202 PFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGL 261 PFP+ G WG PT +NNVETL N+P I+ NG EW+ I K GTK+ +G+VK+ GL Sbjct: 329 PFPSVKGLWGCPTSINNVETLANIPLIIYNGSEWFSKIGSGKSTGTKVFAMTGKVKSSGL 388 Query: 262 WELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRL 321 E+P G T +E++ D G DG KA Q GG + D+P+ +ES+ +AGS + Sbjct: 389 IEVPMGITIKEVVFDIGEGAYDGRVIKAVQTGGPSGGVIPAEKFDMPITYESLIEAGSMM 448 Query: 322 GTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDI 381 G+ + +D+ MV + + EF ESCG C PCR G +KIL+ + G+ + GD Sbjct: 449 GSGGLIVMDNSDCMVDIAKFYLEFCVEESCGKCVPCRIGGYQLLKILKDISEGK-EVGDY 507 Query: 382 -ETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNT 430 E + L + + CA A P+ S +K F EF+ +K+ T Sbjct: 508 KEKIGNLALTMQKA-SLCALGQTAPNPVLSCLKSFGHEFDEHVKEKHCPT 556 >UniRef50_C1AB34 NADH-quinone oxidoreductase chain F n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AB34_GEMAT Length = 439 Score = 300 bits (768), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 151/401 (37%), Positives = 238/401 (59%), Gaps = 3/401 (0%) Query: 26 LDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIR 85 L Y+++ GY+ +KALT + P ++ +V +GL G GGA F G KW ++ K Sbjct: 19 LAAYKARGGYQSLQKALTSMQPTDVTKEVAASGLLGHGGAAFPAGRKWGVI-KLTDGEPH 77 Query: 86 YLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRR 145 Y+ NADE EPGT+KDR L+E +PHL +EG++++++A+ +I++RGE+ LR Sbjct: 78 YVCMNADEGEPGTFKDRWLLEHVPHLCIEGLILASYAIMGRHAFIYIRGEFDLPFRRLRD 137 Query: 146 AIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPA 205 AI EA AGLLG+NI+GTG+ ++ ++ GAG Y+CGE +A++ SLEG++ PR++PP Sbjct: 138 AIEEAYAAGLLGENILGTGYSLDIVLYRGAGSYVCGEASAMLASLEGKKGWPRNRPPRLT 197 Query: 206 TSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELP 265 G + +PT VNNVETL N+PAI+ G E ++ + K GT+++ SG + PG++E+ Sbjct: 198 VKGLYQRPTVVNNVETLANIPAIIGEGGETFRKVGLPKSPGTQMISISGHLVRPGVYEIE 257 Query: 266 FGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLD-LPMEFESIGKAGSRLGTA 324 +G + + + + GG+ G K PGG T L L ++ S AGS++G+ Sbjct: 258 YGYSWEKFIYEDCGGILGGRALKCVIPGGVSTKILDANELKGRTLDHNSALAAGSQIGSG 317 Query: 325 LAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETL 384 + + MV + R ++ F+ ESCG CTPCR+G+ W +IL + RGEG+P DI+ L Sbjct: 318 GMIVIAEGTCMVRVARVIQRFYHHESCGQCTPCREGMGWMERILDRIVRGEGRPEDIDRL 377 Query: 385 EQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 + G T C+ A + + ++R+EFE I Sbjct: 378 YHIST-ANDGTTICSLGDSAGYACSAILDHYRDEFEHFITH 417 >UniRef50_C0GLX1 NADH dehydrogenase (Quinone) n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GLX1_9DELT Length = 593 Score = 299 bits (766), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 155/404 (38%), Positives = 231/404 (57%), Gaps = 2/404 (0%) Query: 22 QPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDES 81 P LD Y + GY+ AR A + P EI+ ++K + L+GRGGAGFSTG KW K + Sbjct: 123 DPEDLDAYLNVKGYQAARNAFNNMHPVEIIEKIKRSKLRGRGGAGFSTGHKWEFAYKVDD 182 Query: 82 MNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAV 141 +Y++CN +E +PG + DR +ME PH ++EGM+I A A+ A +GYI++R Y A Sbjct: 183 QE-KYVVCNGNESDPGAFADRCIMEGDPHAVIEGMMICARAIGAGKGYIYIRDGYSLAVK 241 Query: 142 NLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKP 201 LR A+ + E GLLGKNI +G D ++ ++ G +ICGE TAL+ S+EG+RA P + Sbjct: 242 RLRLALKQCYERGLLGKNIFESGHDLDIKLYPAPGAFICGEATALVQSIEGKRAMPTPRM 301 Query: 202 PFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGL 261 + +G GKPT +NN ETL NVP IL NG W+ + GTK+ +G+VK+ GL Sbjct: 302 TRTSENGIRGKPTVINNAETLANVPKILRNGASWFAGLGTDTSGGTKVFSLTGKVKSNGL 361 Query: 262 WELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRL 321 E+P G T R+++ GG+ FK Q GG + + LD +++ES+ AG+ + Sbjct: 362 VEVPMGATLRDVVYKVGGGIDQDRAFKGIQLGGPTGGCVPGSCLDSRVDYESLALAGTIM 421 Query: 322 GTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDI 381 G+ + +D +V + + ESCG CTPCR G+ +IL + G G+ GD+ Sbjct: 422 GSGGMVVLDETNCIVDTAKFFLDITQAESCGKCTPCRIGMRRMYEILERITIGNGRDGDV 481 Query: 382 ETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 E LE L + + C A P+ S ++YFR+E+ I+ Sbjct: 482 ELLEDLGSHI-RATSLCGFGMTAPNPVLSTVRYFRDEYNIHIRD 524 >UniRef50_A9KQG9 NADH dehydrogenase (Quinone) n=6 Tax=Clostridiales RepID=A9KQG9_CLOPH Length = 628 Score = 296 bits (759), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 163/402 (40%), Positives = 244/402 (60%), Gaps = 7/402 (1%) Query: 26 LDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIR 85 ++EY + GY+ KAL ++ + IV+++ D+ L+GRGG GF TG KW+ + + ++ + Sbjct: 159 INEYIAMGGYQAVAKALFDMTSESIVDEISDSYLRGRGGGGFPTGKKWAQVLR-QTEETK 217 Query: 86 YLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRR 145 Y++CN DE +PG + DR +ME PH ++EGM+I+ A KA+ GYI++R EY A L Sbjct: 218 YVVCNGDEGDPGAFMDRSMMEGDPHRMIEGMIIAGIATKAHYGYIYVRAEYPLAVHRLET 277 Query: 146 AIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPA 205 AI +A GLLG NI+G+GF F L + GAG ++CGE +AL S+EG R PR KPP Sbjct: 278 AIEQARSLGLLGCNILGSGFSFALKISQGAGAFVCGEGSALTASIEGNRGMPRVKPPRTV 337 Query: 206 TSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELP 265 G + KPT +NNVET CNVP+I+ G +WY+ K+ GTK +G V N GL E+P Sbjct: 338 EKGLFEKPTVLNNVETFCNVPSIILKGADWYKTYGLEKNYGTKAFALTGNVMNTGLIEVP 397 Query: 266 FGTTAREILEDYAGGMRDGLKFKAWQPGG-AGTDFLTEA---HLDLPMEFESIGKAGSRL 321 GTT R+++ D GG++ G +FKA Q GG +G + A HLD+P++F+S+ K G+ + Sbjct: 398 MGTTLRKVIYDIGGGVKGG-EFKAVQIGGPSGGCLVLNAENDHLDMPLDFDSLKKVGAMI 456 Query: 322 GTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDI 381 G+ + ++ + MV + R F ESCG C PCR+G +++L + G G + Sbjct: 457 GSGGLVVMNDKSCMVEVARFFMNFTQNESCGKCVPCREGTKRMLELLTDIVEGRGTLEHL 516 Query: 382 ETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGI 423 + LE+L + C A P+ S IKYFR+E+ A + Sbjct: 517 DLLEELAETI-SATALCGLGKTAASPVVSTIKYFRDEYIAHV 557 >UniRef50_B9KZ80 NAD-dependent formate dehydrogenase beta subunit n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KZ80_THERP Length = 574 Score = 296 bits (759), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 153/398 (38%), Positives = 236/398 (59%), Gaps = 2/398 (0%) Query: 22 QPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDES 81 P ++++ + GY KAL ++P+E++ +VK + L+GRGGAGF TG+KW + Sbjct: 153 DPESIEDFIAIGGYRAFLKALFEMTPEEVIAEVKASNLRGRGGAGFPTGIKWE-SGRRTP 211 Query: 82 MNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAV 141 +Y++ N+ E EP +KDR L+E PHL++EG+LI +AL+ GY ++ GE+ A Sbjct: 212 ARPKYVVVNSHEGEPNVFKDRRLLESNPHLVLEGLLIGCYALETPCGYNYIGGEHALALQ 271 Query: 142 NLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKP 201 +RA+ +A E GLLG +I+G+GF + + TG G YICGE +AL+ ++ G+R PR+KP Sbjct: 272 RFQRAVEQAYELGLLGDDILGSGFSCHVRIRTGGGAYICGEGSALMYAIMGQRGQPRTKP 331 Query: 202 PFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGL 261 P G W +PT +NN ET ++PAI+ NG WY ++ + GTKL+ G VK G+ Sbjct: 332 PRSVEEGLWRRPTVLNNTETFASIPAIIQNGGSWYASLGTKESTGTKLVTMQGPVKYLGV 391 Query: 262 WELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRL 321 E+ FG + RE++ D GG+R+G + K Q GG L E LD+P++FE++ G+ + Sbjct: 392 AEIEFGLSMRELIFDVFGGLREGYRLKGIQTGGVSAGPLREDELDVPIDFEALTPLGAMV 451 Query: 322 GTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDI 381 G+ +A D + V R L F ESCG CTPCR G P V+IL + G G+P D+ Sbjct: 452 GSGGFVAFDESVCAVDFARYLVAFSRYESCGKCTPCRLGTPALVEILDRIRHGFGRPEDL 511 Query: 382 ETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEF 419 + ++ + + + C A PL ++ FR+EF Sbjct: 512 DIIQYASKHI-IELSLCGLGQVAPMPLLGMLERFRDEF 548 >UniRef50_D1CCD0 NADH dehydrogenase (Quinone) n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCD0_THET1 Length = 580 Score = 296 bits (758), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 162/405 (40%), Positives = 234/405 (57%), Gaps = 2/405 (0%) Query: 21 KQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDE 80 + P L++Y + G+ KAL +S DEI+ +VK + L+GRGGAGF G+KW + E Sbjct: 150 QNPESLEDYLALGGFSALEKALFEMSQDEIIAEVKASNLRGRGGAGFPAGIKWE-SARSE 208 Query: 81 SMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAA 140 +Y++ NA E EP +KDR L+E P+ ++EG++I+A+A+ GYI++ EY A Sbjct: 209 RNRPKYVIVNAHEGEPNVFKDRRLIEGDPYAVIEGLMIAAWAVGVNDGYIYVGSEYPLAM 268 Query: 141 VNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSK 200 L RAI + GLLGK+I+G+GFDF++ V GAG YI GE +A I ++G++ PR+K Sbjct: 269 ERLNRAIRRMHQVGLLGKDILGSGFDFDIKVVPGAGAYISGEASAAIYGIQGQKGFPRTK 328 Query: 201 PPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPG 260 PP A +G WGKPT VNNVETL NVP I+ G +W+ +I GTK+ +G + + Sbjct: 329 PPRSAEAGLWGKPTVVNNVETLANVPHIINKGAQWFASIGTENSTGTKVFSLAGDINHVS 388 Query: 261 LWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSR 320 L E G T R++L GGMR+G KFKA GG L E+ LDL EF ++ GS Sbjct: 389 LVEADMGITMRDLLFVAGGGMRNGAKFKAVLAGGISGGALPESTLDLTNEFGTLEAEGSM 448 Query: 321 LGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGD 380 +G+ + D MV L F ESCG C PCR G + +L + +G G+ D Sbjct: 449 MGSGGYIIYDENTCMVDLAFYCTRFNRDESCGKCVPCRIGTSAQLAMLDRIMKGLGEEID 508 Query: 381 IETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 I+ L Q + + C A P+ S +++FR+E EA I++ Sbjct: 509 IDRLTQSSEDI-IAYSLCGLGQAAPIPVLSVLRHFRDEVEAHIRE 552 >UniRef50_D1C356 NADH dehydrogenase (Quinone) n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C356_SPHTD Length = 575 Score = 296 bits (757), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 153/403 (37%), Positives = 234/403 (58%), Gaps = 2/403 (0%) Query: 23 PVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESM 82 P +++Y ++ GY+ KA+ ++P+E+VN+VK + ++GRGGAGF G+KW + ++ Sbjct: 153 PESIEDYIARGGYQAWIKAIFDMTPEEVVNEVKISNVRGRGGAGFPAGIKWESGRRTQAW 212 Query: 83 NIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVN 142 +Y++ N+ E EP +KDR L+E PHL++EG++I +AL+ GY ++ GE+ A Sbjct: 213 P-KYVIANSHEGEPNVFKDRRLIESNPHLVLEGIMIGCYALETPHGYNYVGGEHKLAIER 271 Query: 143 LRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPP 202 R+A+ +A E GLLG N++G+G + V TG G YICGE +AL+ S+ G+R PR+KPP Sbjct: 272 FRKAVDQAYELGLLGDNVLGSGVSCHIRVRTGGGAYICGEGSALMYSVMGQRGQPRTKPP 331 Query: 203 FPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLW 262 G W +PT +NN ET N+P I+ NG WY + K GTKL+ G V+ G+ Sbjct: 332 RSVEEGVWKRPTVLNNTETFANIPGIIRNGGAWYAAMGTEKSTGTKLITMQGPVQRIGVV 391 Query: 263 ELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLG 322 E+ G RE++ GGMR+G FK Q GG L E LD+P++F+S+ G LG Sbjct: 392 EIEMGMPMREVIFGLFGGMREGYVFKGVQTGGVSAGPLREDQLDVPVDFDSLTPLGGMLG 451 Query: 323 TALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIE 382 + + D + V R L+EF ESC C PCR G P V+I+ + G+ + GD+ Sbjct: 452 SGGFVVFDQSVCAVDFARYLQEFNRYESCAKCVPCRLGNPALVEIIERIRLGQARQGDLA 511 Query: 383 TLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 +E+ R + + C A P I+ F E+F A I++ Sbjct: 512 LIEETSRPI-IDLSLCGLGQVAPMPTLGMIRAFPEDFAAHIEE 553 >UniRef50_B2V6E9 NADH dehydrogenase (Quinone) n=18 Tax=Bacteria RepID=B2V6E9_SULSY Length = 523 Score = 292 bits (748), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 166/400 (41%), Positives = 241/400 (60%), Gaps = 7/400 (1%) Query: 22 QPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDES 81 P+ + +Y+S G+ G +KA++ + +EI+ ++K +GL+GRGGAGF TG+KW + K S Sbjct: 117 DPLSIKDYQSNGGFLGLKKAIS-MKSEEIIEEIKKSGLRGRGGAGFPTGIKWETVFKTGS 175 Query: 82 MNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAV 141 + +Y++CNADE + GT+ DR++ME P LL+EGM+I+ A+ A GYI+LR EY A Sbjct: 176 -DKKYVVCNADEGDSGTFSDRMIMESDPFLLIEGMVIAGLAVGADEGYIYLRSEYPLAKE 234 Query: 142 NLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKP 201 L +AI A + LGKNI+G+G DF+L V+ GAG Y+CGEETAL+ SLEG+R R KP Sbjct: 235 VLTKAIDLAYKNRYLGKNILGSGKDFDLEVYVGAGSYVCGEETALLESLEGKRGVVRPKP 294 Query: 202 PFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGL 261 P+PA +G W KPT +NNV TL VP I+ G + Y N K GT + SG VK+PGL Sbjct: 295 PYPAINGLWNKPTLINNVNTLATVPWIIREGGDKYFNYGVGKSRGTIAIQLSGNVKHPGL 354 Query: 262 WELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRL 321 E+PFG + ++I+ + GG + G K KA GG ++ E+ D+ +++ES+ K G + Sbjct: 355 VEVPFGISIKDIVYGFGGGTKTGKKVKAALIGGPFGIYIPESMFDISIDYESLSKIGGTI 414 Query: 322 GTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDI 381 G + D E ++ L R EF ESCG C PCR G S++ L L++ Q D Sbjct: 415 GHGSIVVFDEEADLKYLARFAMEFCFIESCGKCAPCRIG---SIRGLEILDKLLNQGRDE 471 Query: 382 ETLEQLCRF--LGPGKTFCAHAPGAVEPLQSAIKYFREEF 419 + + + C A +P+ S K+F EEF Sbjct: 472 RLISMFVDLSEVMINTSLCGLGGMAPKPILSLFKHFPEEF 511 >UniRef50_A8ERL2 NADH-quinone oxidoreductase, F subunit n=2 Tax=Campylobacteraceae RepID=A8ERL2_ARCB4 Length = 416 Score = 290 bits (742), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 163/395 (41%), Positives = 234/395 (59%), Gaps = 4/395 (1%) Query: 33 NGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNAD 92 NG + L + P+E+ +V +GL+G+GG G + G KW LMP + RYL+ N D Sbjct: 24 NGRYSSIDKLFTMKPEEVTAEVTKSGLRGKGGGGAACGPKWELMPPVDERP-RYLIVNGD 82 Query: 93 EMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATE 152 E EPGT+KDR + + PH+L+EG++ + +A++A YI++RGEY L AI EA E Sbjct: 83 ESEPGTFKDRQIFQYDPHILIEGIICTCWAIQANHAYIYIRGEYKFFIDRLNEAIKEAYE 142 Query: 153 AGLLGKNIMGT-GFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWG 211 A ++G IM F ++ VH G G YICGE++ALI SLEG+R +PR KP + Sbjct: 143 AKIIGDKIMDKYDFKVDITVHRGGGAYICGEKSALIESLEGKRGHPRLKPHGKECEWFFD 202 Query: 212 KPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAR 271 P VNNVET+ +VP I+ NG E Y K GT L SG VKNPG++E+ +G Sbjct: 203 NPATVNNVETISSVPNIVENGAEGYTKYGTEKSPGTMLFAISGPVKNPGVYEMAYGNKMI 262 Query: 272 EILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLP-MEFESIGKAGSRLGTALAMAVD 330 + L GGM +G K KA PGG+ LT + ++ +++ES+ + GS LGT + +D Sbjct: 263 DFLNVLGGGMLEGKKLKAIIPGGSSCPILTASEVEKAVLDYESMWEIGSTLGTGGMIVID 322 Query: 331 HEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRF 390 + +MV + +N+ EF+ ESCG CTPCR+G W KIL+ + GE D++T+ +C Sbjct: 323 EDTSMVEVAKNIIEFYHHESCGQCTPCREGTGWIDKILKKVIAGEASDKDLKTIMDVCDT 382 Query: 391 LGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 L GKT C AP + + S +K F EEF+A +K Sbjct: 383 LN-GKTVCVFAPAVKDIIASIVKKFPEEFKAYLKN 416 >UniRef50_A9BV38 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=188 Tax=cellular organisms RepID=A9BV38_DELAS Length = 727 Score = 288 bits (736), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 160/404 (39%), Positives = 228/404 (56%), Gaps = 10/404 (2%) Query: 23 PVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESM 82 P+ L +Y + G++G +A + P IV +V D+GL+GRGGA F G+KW + Sbjct: 316 PLNLADYAAHGGWQGLERAAR-MEPAAIVQEVLDSGLRGRGGAAFPAGIKWKTVAAAAGP 374 Query: 83 NIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVN 142 +Y+ CNADE + GT+ DRLLME P+ L+EGM I+ A+ A +G +++R EY A Sbjct: 375 Q-KYIACNADEGDSGTFADRLLMEGDPYTLIEGMAIAGLAVGATQGLVYVRSEYPHAVAT 433 Query: 143 LRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPP 202 LR AIA A AG LG+++ G+G F + V GAG Y+CGEETA++ S+EGRR R+KPP Sbjct: 434 LREAIARAEAAGWLGRDVAGSGRAFHMEVRKGAGSYVCGEETAMLESIEGRRGIVRAKPP 493 Query: 203 FPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLW 262 PA G WG+PT +NNV TL VP ILA G +YQ + GT +G + GL Sbjct: 494 LPAIEGLWGRPTVINNVITLATVPMILARGAAFYQGFGMGRSRGTLPFQLAGNIARGGLV 553 Query: 263 ELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLG 322 E FG + RE++ED+ GG G KA Q GG ++ A D P+++E+ G+ +G Sbjct: 554 EKAFGLSLRELVEDFGGGTATGRTVKAVQVGGPLGSYVAPADWDAPLDYEAYAAKGNVVG 613 Query: 323 TALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERG-------E 375 + D +M L R EF A ESCG CTPCR G V+++ + R Sbjct: 614 HGGIVVHDDTADMAQLARYAMEFCAIESCGKCTPCRIGSTRGVEVIDRIVRAGADPAAHA 673 Query: 376 GQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEF 419 G G + LE LC + G + CA P++SA+ ++ ++F Sbjct: 674 GHAGQVALLESLCDTMQHG-SMCAMGGMTPYPVRSALNHYSQDF 716 >UniRef50_C9KNE8 Protein HymB n=2 Tax=Veillonellaceae RepID=C9KNE8_9FIRM Length = 416 Score = 286 bits (733), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 155/397 (39%), Positives = 229/397 (57%), Gaps = 3/397 (0%) Query: 26 LDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIR 85 + Y + G+E RKA+T + P+EI + + +KGRGGA + G KWS + + Sbjct: 19 IGSYMNVGGFEALRKAVT-MDPEEITDLLTAVKIKGRGGAEYPLGRKWS-QARAVRGERK 76 Query: 86 YLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRR 145 ++CNADE E T+KDR L+ P L+E M+I+A+ + A G+I++R EY L Sbjct: 77 VVICNADEGETTTFKDRELICHDPFNLIEAMIIAAYVVGASDGFIYMRAEYACFRPLLLN 136 Query: 146 AIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPA 205 AI +A G LG NI+G GFDF++ +++GAG Y+CGE TALI S+EG+ PR KPPF Sbjct: 137 AIRQAKNYGFLGTNILGRGFDFDIHLYSGAGAYVCGEGTALIRSIEGKAGRPRMKPPFIK 196 Query: 206 TSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELP 265 SG + +PTC+NNVETL VP +L + Y + + GTKL+ +G V +PG++E+P Sbjct: 197 VSGVFARPTCLNNVETLSLVPHLLLDEEGVYASCGSGESIGTKLVSVAGNVNHPGVFEIP 256 Query: 266 FGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTAL 325 FGTT REIL + AGG++ K + Q GGA ++ LD P +E + AG +G+ Sbjct: 257 FGTTVREILYELAGGIQHDRKIRLIQFGGASGKIADDSILDTPYTYEDLRAAGVMVGSGG 316 Query: 326 AMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLE 385 + +D +++ +R +EFF ESCG CTPCR+G IL + G DI + Sbjct: 317 MLVIDERTSVLDFLRMNQEFFWEESCGQCTPCREGNLHIKIILDKMATGTATREDIAIMM 376 Query: 386 QLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAG 422 ++ R + + C A L SA+K F + F+ G Sbjct: 377 KIARVMSM-SSLCGLGETAQNSLLSAMKVFPDLFDIG 412 >UniRef50_B8D1I1 NADH dehydrogenase I subunit F n=2 Tax=Bacteria RepID=B8D1I1_HALOH Length = 408 Score = 286 bits (733), Expect = 9e-76, Method: Compositional matrix adjust. Identities = 139/324 (42%), Positives = 206/324 (63%), Gaps = 2/324 (0%) Query: 38 ARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPG 97 A K + +I+ ++K +GL+GRGGAGF TGLKW L K+++ +Y++CN DE EPG Sbjct: 22 ALKRALDMDKKDIIEELKKSGLRGRGGAGFPTGLKWELALKEKAGE-KYIICNGDEGEPG 80 Query: 98 TYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLG 157 T+KDR L+E P ++EG+LI A+ + A++GYI++RGEY R+ I EA + G+LG Sbjct: 81 TFKDRYLLENSPLKVLEGILIGAYTIGAHQGYIYIRGEYALPINIFRQVIKEAKKRGILG 140 Query: 158 KNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVN 217 +MG+ + F+L + GAG Y+CG+ET+LINS+EG+R R KPP+P G + KPT VN Sbjct: 141 NRVMGSDYSFDLKLIKGAGAYVCGDETSLINSIEGKRGTSRIKPPYPTRQGLFNKPTVVN 200 Query: 218 NVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGT-TAREILED 276 NVETL I+ G + Y ++ + GTKL+ SG + NPG++E+ FGT T +E+++ Sbjct: 201 NVETLAAAAEIILQGADKYGSMGTEQSRGTKLVCLSGDICNPGVYEVEFGTMTIKELIDT 260 Query: 277 YAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMV 336 + GG++ K PGG T L + LD+P +E I K GS LG+ + V + + Sbjct: 261 FGGGVKCSSGLKFVIPGGISTSVLKDDELDIPYTYEDIEKKGSSLGSGAVVVVSEDHYLP 320 Query: 337 SLVRNLEEFFARESCGWCTPCRDG 360 L+ N+ FF E+CG C PCR+G Sbjct: 321 DLMLNVSRFFMDETCGTCFPCREG 344 >UniRef50_D2PS76 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PS76_9ACTO Length = 565 Score = 286 bits (732), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 147/336 (43%), Positives = 209/336 (62%), Gaps = 4/336 (1%) Query: 27 DEYRS-KNGYEGARKALTG-LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNI 84 D Y S ++ Y R L+G LS DE++ ++DAGL+G GGAGF TG KW L+ E + Sbjct: 164 DPYASGEHHYRSLRALLSGQLSADEVITALQDAGLRGMGGAGFPTGKKWELVRAAEGA-V 222 Query: 85 RYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLR 144 +Y +CNADE EPGT+KDR L+ + PHL++EG+L+ A G++F+R EY L Sbjct: 223 KYAICNADESEPGTFKDRQLLAEQPHLVLEGLLMGMLVTGAEEGWVFIRHEYGPEEAVLH 282 Query: 145 RAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFP 204 I E GL+G +++GTG L + T G YI GEETAL+ +EG R PR+KPPFP Sbjct: 283 SEIGRLREQGLIGPDVLGTGRRLMLDIFTSPGGYILGEETALLECMEGHRGEPRNKPPFP 342 Query: 205 ATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWEL 264 G WGKPT +N+VET +VPAI+A G +W+ + G K SG V+ PG++ + Sbjct: 343 GNYGLWGKPTLMNSVETFADVPAIVARGADWWNAQGVNGATGLKFFAVSGHVERPGVYCV 402 Query: 265 PFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTA 324 P GTT R+++ D AGG+ G + +A QPGGA ++FL HLD+P++F ++ +AGS LG+ Sbjct: 403 PMGTTIRDLI-DVAGGVAGGAELEAVQPGGASSNFLGPEHLDVPLDFGTLAEAGSMLGSG 461 Query: 325 LAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDG 360 + + + ++ N+ FF ESCG C PCR G Sbjct: 462 AMVVMAAGTDALAAATNVLRFFRNESCGKCVPCRVG 497 >UniRef50_Q47HE6 NADH dehydrogenase (Ubiquinone), 24 kDa subunit:Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit n=4 Tax=Proteobacteria RepID=Q47HE6_DECAR Length = 632 Score = 286 bits (731), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 155/382 (40%), Positives = 218/382 (57%), Gaps = 15/382 (3%) Query: 47 PDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKD--ESMNIRYLLCNADEMEPGTYKDRLL 104 P ++++K A L+GRGGAGF+TGLKW ++ R ++CNADE EPGT+KDR+L Sbjct: 226 PGATLDEIKRANLRGRGGAGFTTGLKWEACRNAPLKAGAQRIVVCNADEGEPGTFKDRVL 285 Query: 105 MEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGT- 163 + + P L+ EGM ++A+A+ A RG+++LRGEY +L +A LLGK+I+G Sbjct: 286 LSRNPDLVFEGMTVAAYAVGATRGFVYLRGEYRYMLDHLNAVLAHRRREKLLGKDILGLP 345 Query: 164 GFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLC 223 G DF++ +H GAG Y+CGEE+ALI SLEG+R PR++PPFP T+G +PT VNNVET Sbjct: 346 GADFDIEIHVGAGAYVCGEESALIESLEGKRGTPRNRPPFPVTNGYLDQPTIVNNVETFA 405 Query: 224 NVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRD 283 I NG +WY I AGTKL+ SG + PG++E PFG + R++LED G RD Sbjct: 406 AAALIALNGGDWYAAIGTKHSAGTKLLSVSGDCERPGIYEYPFGVSVRQVLEDC--GARD 463 Query: 284 GLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLE 343 + P G + E D + FE I AG+ ++ +M + RN Sbjct: 464 TQAVQVSGPSGI---CIAEQEFDRVIGFEDIPTAGA------FTVFNNTRDMFEVARNYV 514 Query: 344 EFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPG 403 FF ESCG+CTPCR G ++ L G G P D +E+L + L + C Sbjct: 515 HFFQHESCGFCTPCRVGTSLLKNLMDKLHNGVGSPYDFAEIEKLNQLL-QSMSHCGLGHT 573 Query: 404 AVEPLQSAIKYFREEFEAGIKQ 425 A P+ I+ FR +E + Q Sbjct: 574 ACNPVLDTIERFRPAYERRMAQ 595 >UniRef50_B1Y7Y8 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=11 Tax=Proteobacteria RepID=B1Y7Y8_LEPCP Length = 627 Score = 283 bits (725), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 156/375 (41%), Positives = 212/375 (56%), Gaps = 16/375 (4%) Query: 50 IVNQVKDAGLKGRGGAGFSTGLKWSL---MPKDESMNIRYLLCNADEMEPGTYKDRLLME 106 ++++VK + L+GRGGAG+ TG KW L P + N Y++CNADE EPGT+KDR+L+ Sbjct: 227 LLDEVKQSNLRGRGGAGYQTGRKWELCREAPGNTPDNTHYVVCNADEGEPGTFKDRVLLS 286 Query: 107 QLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMG-TGF 165 + L EGM I+ FA+ A +G+++LRGEY L+ + EA LLG I G GF Sbjct: 287 RYADSLFEGMTIAGFAIGARQGFVYLRGEYRYLLEPLQAVLQRRREANLLGAAIQGREGF 346 Query: 166 DFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNV 225 DF++ +H GAG Y+CGEE+ALI SLEG+R PR +PP+P G +PT VNNVET C V Sbjct: 347 DFDIDIHVGAGAYVCGEESALIESLEGKRGTPRIRPPYPVEHGYLDEPTIVNNVETYCAV 406 Query: 226 PAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGL 285 I +G W+ I K GTK+ SG + PG++E P+GT ILED G RD Sbjct: 407 THIAVHGAAWWAGIGTPKSTGTKIHSVSGDCERPGIYEYPYGTRIGRILEDC--GARDT- 463 Query: 286 KFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEF 345 +A Q GG L+ + FE + AG+ M D +M + RN +F Sbjct: 464 --QAVQVGGPSGVCLSAFEFGRRIAFEDVPTAGA------FMVFDRSRDMFEVARNFAQF 515 Query: 346 FARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAV 405 FA ESCG+CTPCR G VK + L G+G D++ L +L + + T C A Sbjct: 516 FAHESCGFCTPCRVGTALVVKRMDKLAAGQGSRHDVDVLFELDKLMHTA-THCGLGGAAC 574 Query: 406 EPLQSAIKYFREEFE 420 PL+ I FR +E Sbjct: 575 NPLRDTIAKFRPAYE 589 >UniRef50_C4LEV2 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LEV2_TOLAT Length = 570 Score = 281 bits (718), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 163/406 (40%), Positives = 227/406 (55%), Gaps = 25/406 (6%) Query: 29 YRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLL 88 Y S + G KA + PDE++ ++ +GL GRGGAGF TG KW M D + +++Y++ Sbjct: 180 YASHHANAGITKA-AAMEPDEVIAEISASGLCGRGGAGFPTGTKWK-MAADANGDVKYMI 237 Query: 89 CNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIA 148 CNADE EPGT+KDR+ + L+ EGM I+A+A++A +G ++LR EY +L + + Sbjct: 238 CNADEGEPGTFKDRITLSWFADLVFEGMTIAAYAIRASQGIVYLRAEYAYLLPHLEQVLK 297 Query: 149 EATEAGLLGKNIMGT-GFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATS 207 EAGLLG +I G GF+F++ + GAG Y+CGEETALI SLEG R PR++PP+P + Sbjct: 298 ARREAGLLGCDISGKEGFNFDIRIQMGAGSYVCGEETALIESLEGNRGEPRNRPPYPTEA 357 Query: 208 GAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFG 267 G G+PT VNNVETL V ILA G +W+ I K G KL SG PGL+ELP+G Sbjct: 358 GFLGQPTVVNNVETLATVSVILARGAQWFSGIGTEKSKGFKLFSVSGECARPGLYELPWG 417 Query: 268 TTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAM 327 +T +L + G KA Q GG FL A + +E +G AGS + + Sbjct: 418 STVSGLL-----ALAGGEGAKAVQIGGYSGRFLPAAEFGRKLAYEDLG-AGSSV-----I 466 Query: 328 AVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQL 387 + +++ + N EFF ESCG CTPCRDG + +R+L G+ +QL Sbjct: 467 IYGPDRDLLEVAENYLEFFVEESCGQCTPCRDGNVVLLNGIRSLRNGKCSG------QQL 520 Query: 388 CRFLGPGKTFCAHAP---GAVEP--LQSAIKYFREEFEAGIKQPFS 428 L +T C + G P L S +YFR E A + S Sbjct: 521 DELLSLAETICVASKCGLGQSSPKVLLSINRYFRNEINAHLTAEHS 566 >UniRef50_C8QXK3 NADH dehydrogenase (Quinone) n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QXK3_9DELT Length = 601 Score = 278 bits (710), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 162/424 (38%), Positives = 241/424 (56%), Gaps = 25/424 (5%) Query: 19 DDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPK 78 ++ P ++ Y + GY L P EI++++ +GL+GRGG G+ GLKWS + K Sbjct: 153 ENIDPERIESYLAAGGYRALLDCLHHRRPVEIIDEITRSGLRGRGGGGYPVGLKWSTVAK 212 Query: 79 DESM----------------------NIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGM 116 + +Y++CNADE +PG + DR ++E PH ++EGM Sbjct: 213 AGAFVPQAGRSSRQSAGATAADRPDGPRKYVICNADEGDPGAFMDRSVLECAPHRVLEGM 272 Query: 117 LISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAG 176 I+A+A+ A GY+++R EY A LR+AI +A + GLLG+NI G+ F+F++ + GAG Sbjct: 273 AIAAYAVGADFGYLYVRAEYPLAVERLRKAIVQAEKRGLLGRNIGGSAFNFQVEIRLGAG 332 Query: 177 RYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWY 236 ++CGEETAL+ S+EGRR PR +PP+PA G WG PT +NNVETL NV AI+ G +W+ Sbjct: 333 AFVCGEETALLASIEGRRGQPRPRPPYPAEHGLWGCPTLINNVETLANVAAIINRGADWF 392 Query: 237 QNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAG 296 + K GTK+ +G++KN GL E+P G + EI+ + G G+ KA Q GG Sbjct: 393 AALGTEKSKGTKVFALAGKIKNTGLIEVPMGISIHEIVHEMGSGEVGGI--KAVQTGGPS 450 Query: 297 TDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTP 356 + H LP+++ES+ GS +G+ + +D MV + R EF ESCG C P Sbjct: 451 GGCIPAEHFHLPVDYESLQAEGSIMGSGGMIIMDEGAAMVDVARFFMEFCVEESCGKCAP 510 Query: 357 CRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFR 416 CR G + +L + RGEG D+ LE+LC L + C A P+ S +++FR Sbjct: 511 CRVGTTQVLLLLEKIGRGEGTAADLGQLEELCHLL-QQTSLCGLGQSAANPVLSTLRFFR 569 Query: 417 EEFE 420 E+E Sbjct: 570 REYE 573 >UniRef50_Q2SQP5 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit n=3 Tax=Proteobacteria RepID=Q2SQP5_HAHCH Length = 611 Score = 271 bits (693), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 167/450 (37%), Positives = 242/450 (53%), Gaps = 45/450 (10%) Query: 1 MKNIIRT------PET-----------HPLTWRL-RDDKQ---PVWLDEYRSKNGYEGAR 39 +KNI+RT P+T HPL + R++ + PV L + G + A Sbjct: 145 VKNILRTLRKTKDPQTLIGKTGDGANSHPLVQAMVRNNIRQPGPVLLTDANPDQGLQAAL 204 Query: 40 KALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSL---MPKDESMNIRYLLCNADEMEP 96 + LSP E++ QV+++ L+GRGGAGF TG KW L P +E RY++CNADE EP Sbjct: 205 Q----LSPLEVIAQVEESLLRGRGGAGFPTGRKWRLAANTPAEE----RYVICNADEGEP 256 Query: 97 GTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLL 156 GT+KDR+L+ + P LL GM I+A+A+ A G ++LRGEY L + E LL Sbjct: 257 GTFKDRVLLTEKPDLLFAGMTIAAYAVGARHGILYLRGEYRYLRAYLEATLQRRREQNLL 316 Query: 157 GKNIMG-TGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTC 215 G I+G F F++ + GAG YICGEE++LI+S EG+R P+++PPFP SG G PT Sbjct: 317 GAGILGRDDFSFDIRIQMGAGAYICGEESSLISSCEGKRGEPKNRPPFPVQSGYLGHPTV 376 Query: 216 VNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILE 275 VNNVETL VP I+ G W++ + + +GTKL+ SG PG++E+ FG T EIL Sbjct: 377 VNNVETLSCVPRIMEQGAPWFRGMGTTGSSGTKLLSVSGDCVRPGIYEIAFGVTLAEILT 436 Query: 276 DYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINM 335 G +D A GGA + + FE + AG+ + + N+ Sbjct: 437 Q--AGAQDA---AAIVVGGASGQIVGRTEFHRRLCFEDLASAGA------IVCFNSSRNI 485 Query: 336 VSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGK 395 + +FF ESCG+CTPCR G + K L + GEG+P D++ L L + Sbjct: 486 LEAAAYYMDFFIEESCGYCTPCRVGNVFLKKGLEKIMHGEGEPEDLDYLRSLSDTI-IAT 544 Query: 396 TFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 + C + P+ S ++YF + A +K+ Sbjct: 545 SRCGLGHTSPNPILSTMEYFPLVYSAMVKE 574 >UniRef50_C0X553 NADH dehydrogenase (Quinone) n=24 Tax=Firmicutes RepID=C0X553_ENTFA Length = 432 Score = 266 bits (681), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 147/407 (36%), Positives = 230/407 (56%), Gaps = 7/407 (1%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 L R+ + + EY +G++G ++A++ LS +EI+N++ A L+GRGGA + G K Sbjct: 9 LLERMGKMQSATDVAEYCKYDGFDGLKRAIS-LSDEEILNELDIAHLRGRGGAAYPLGKK 67 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 W + + +Y++CNADE EPGT+KD++L+ + P ++EGM+I+ + A GYI++ Sbjct: 68 WRHLYHAKGTT-KYIVCNADEGEPGTFKDKVLLSEDPLSVIEGMIIAGYLFSAKAGYIYM 126 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGT-GFDFELFVHTGAGRYICGEETALINSLE 191 RGEY + A+ A +AG LG+NI+G GF++++ + +GAG YICGE +AL+NS+E Sbjct: 127 RGEYRRIQKTFQEALDNARQAGFLGENILGIEGFNYDITIISGAGAYICGENSALLNSIE 186 Query: 192 GRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMG 251 G+ PR KPP A G + +PT VNNVE+ +VP IL G + + + + GTKL+ Sbjct: 187 GKTGRPRVKPPHLADVGLYLQPTLVNNVESFASVPVILREGGQAFLEMGTADGGGTKLIC 246 Query: 252 FSGRVKNPGLWELPFGTTAREIL--EDYAGGMRDGLKFKAWQPGGAGTDFLTEAHL-DLP 308 SG +KN GL+E+ GT EI+ E Y GG G K GG A L D Sbjct: 247 LSGHIKNRGLYEVNLGTPLEEIIYGEQYGGGSATGRALKFIHFGGQSGPIGAVATLRDCL 306 Query: 309 MEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKIL 368 +E + +G+ + +D +N+V + ++ FFA ESCG CTPCR G +++L Sbjct: 307 YSYEDLWAHDLSVGSGAIVVMDDSVNVVDYLVHVAAFFAHESCGKCTPCRLGTTRILELL 366 Query: 369 RALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYF 415 R E D+ LE++ + + C P++SA+ F Sbjct: 367 SKFNRNEATASDLPRLEKMLTHV-TRLSACGLGQSVANPMKSALALF 412 >UniRef50_D1N816 NADH dehydrogenase (Quinone) n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N816_9BACT Length = 573 Score = 266 bits (679), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 158/404 (39%), Positives = 235/404 (58%), Gaps = 9/404 (2%) Query: 22 QPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDES 81 P ++Y + +GY+G KAL ++ ++V++VK +GL+GRGG GF TG KW + ++ Sbjct: 109 DPTSFEDYVAHDGYKGLEKAL-AMTSQQVVDEVKLSGLRGRGGGGFPTGNKWGFLAAKQA 167 Query: 82 MNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAV 141 + + L+CNADE +PG + DR LME PH ++EGMLI+A+A A + +I+ R EY A Sbjct: 168 -DEKILICNADEGDPGAFMDRSLMESAPHQVLEGMLIAAYATGATKLFIYCRAEYPMAIK 226 Query: 142 NLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKP 201 +L+ AIA+ E L N++ G + E+ + GAG ++CGEETALI SLEG+R PR +P Sbjct: 227 HLKIAIAQIYEHKL---NVV-NGRELEIIIKEGAGAFVCGEETALIASLEGQRGTPRFRP 282 Query: 202 PFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGL 261 PFP G G P+ +NNVET NVP IL G + ++ GTKL +G +K+PGL Sbjct: 283 PFPTDKGWMGHPSMINNVETFGNVPLILREGAAAFASVGTEGSKGTKLFALAGDLKHPGL 342 Query: 262 WELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRL 321 E+P GTT REI+ D G D K KA Q GG + D P++++S+ K G+ + Sbjct: 343 VEVPMGTTLREIVFDIGGA--DPEKVKAVQTGGPSGGCIPVELFDTPVDYDSLRKLGAIM 400 Query: 322 GTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDI 381 G+ + + + MV R +F RESCG CT CR G + L + G+G D+ Sbjct: 401 GSGGMIVIGKDRCMVETARYFLDFTHRESCGKCTFCRVGTTRMYETLERIVAGKGSMEDL 460 Query: 382 ETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 LE L + G + C A P+ + ++Y+R E+EA ++ Sbjct: 461 ALLEDLGPKIRMG-SLCGLGQTAPNPVLATLRYYRHEYEAHVRD 503 >UniRef50_A7IMB3 NADH dehydrogenase (Quinone) n=15 Tax=Proteobacteria RepID=A7IMB3_XANP2 Length = 422 Score = 265 bits (677), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 160/377 (42%), Positives = 214/377 (56%), Gaps = 8/377 (2%) Query: 47 PDEIVNQVKDAGLKGRGGAGFSTGLKWSLM---PKDESMNIRYLLCNADEMEPGTYKDRL 103 PD I+ +KDA L+G GGAGF T KWS P DE +Y++CN +E EPGT+KDR Sbjct: 44 PDAIIETLKDADLRGMGGAGFPTWRKWSAAAASPCDE----KYVVCNGNEDEPGTFKDRH 99 Query: 104 LMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGT 163 L+ PH ++EG LI+A A+KA R ++ E +R A+ E T + LL Sbjct: 100 LLRWTPHQVIEGALIAAVAVKANRVVFYVNPHQAEGIDQMRWAVDEWTASDLLASVSKVV 159 Query: 164 GFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLC 223 G L V +GRYI GEETA+++ L+G PR KPPFP SG G PT +NN ETL Sbjct: 160 GRPVTLTVAPSSGRYIGGEETAIVSWLDGGFPFPRRKPPFPFESGVGGLPTLINNTETLA 219 Query: 224 NVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRD 283 NVP IL NG +WY+++ AGTKL SG V NPGL+ELP GT+ E++ + GGM D Sbjct: 220 NVPHILKNGADWYRDLGVGAAAGTKLFSLSGDVLNPGLYELPMGTSLEELVFVHGGGMLD 279 Query: 284 GLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLE 343 G FKA GG LT LD+ ++F+S+ + SRLGT + + ++V V Sbjct: 280 GRAFKAVFTGGPSNTLLTARDLDVALDFDSVKRRKSRLGTGAMIVISEGTSIVRKVAEYV 339 Query: 344 EFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPG 403 FFA SCG C C+ G ++L + G G D + L+ LCR L PG CA G Sbjct: 340 AFFASGSCGQCPSCKCGTFQMARLLDRIATGRGVEADRQALDHLCRIL-PGSGRCALIDG 398 Query: 404 AVEPLQSAIKYFREEFE 420 AV ++S+ F +E+E Sbjct: 399 AVTVVESSRHTFPDEYE 415 >UniRef50_B6K7D1 NADH-quinone oxidoreductase subunit F n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K7D1_SCHJY Length = 418 Score = 261 bits (668), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 138/370 (37%), Positives = 213/370 (57%), Gaps = 5/370 (1%) Query: 50 IVNQVKDAGLKGRGGAGFSTGLKW-SLMPKDESMN--IRYLLCNADEMEPGTYKDRLLME 106 ++N + + L+GRGG+GF TG KW S++ E + +RYL+ NA E EPG++KDR L+ Sbjct: 39 LINTISRSMLRGRGGSGFYTGRKWESVVATAELLKHPMRYLVVNASEGEPGSFKDRYLLA 98 Query: 107 QLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFD 166 +PH ++EG ++SA A+ A YI +R EY + A++L+ AI EA E G LGKNI+GT F Sbjct: 99 SVPHTVIEGSIMSAKAIGASACYISVRAEYYKEALHLQEAINEAYEEGYLGKNILGTDFS 158 Query: 167 FELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVP 226 ++F+H G G YI GEETAL+ SLEG+ A PR +PPFP G +G T VNNVET+ N+P Sbjct: 159 LDIFIHRGEGNYISGEETALLESLEGKAAKPRVRPPFPTEHGVFGCATAVNNVETIANIP 218 Query: 227 AILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLK 286 IL NG EW++++ + GTKL SG V+ P ++E +E++E + G + Sbjct: 219 CILENGDEWFRSLGSPNNYGTKLFCISGDVRQPNVYEERLSIPLKELIETHGGVIGGWDS 278 Query: 287 FKAWQPGGAGTDFLTEAHLD-LPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEF 345 A PGG + + + M+++ + + G+ LGTA + ++ + + N +F Sbjct: 279 LVAVFPGGPSMGICNKEQCEHMLMDYDYLRQIGTGLGTASVIVLNDIDKVFEAILNFSKF 338 Query: 346 FARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAV 405 + +E+C C CR+G ++L + G+ P I L Q+ ++ T C + Sbjct: 339 YKKETCRKCLACRNGTKIINELLELVREGKATPSVITDLRQVSNYV-TKDTICNFSAAPS 397 Query: 406 EPLQSAIKYF 415 L S K F Sbjct: 398 LLLNSYFKNF 407 >UniRef50_B4Q4H9 GD22602 n=4 Tax=Coelomata RepID=B4Q4H9_DROSI Length = 499 Score = 258 bits (658), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 151/412 (36%), Positives = 215/412 (52%), Gaps = 52/412 (12%) Query: 48 DEIVNQVKDAGLKGRGGAGFSTGLKWSLM--PKDESMNIRYLLCNADEMEPGTYKDRLLM 105 D IVN++K +GL+GRGGAGF +G+KWS M P D +L +DR +M Sbjct: 89 DWIVNEIKTSGLRGRGGAGFPSGMKWSFMNKPGDGRPKAWHL------------QDREIM 136 Query: 106 EQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLG-------- 157 PH LVEG LI+ A+ A YI++RGE+ LR I+ A L Sbjct: 137 RHDPHKLVEGCLIARRAMGAQAAYIYIRGEFYNEEPALRSEISAHPPAVRLSDADAPWAQ 196 Query: 158 ---------------------------KNIMGTGFDFELFVHTGAGRYICGEETALINSL 190 K GTG+DF++F+H GAG YICGEETALI SL Sbjct: 197 LPTLIVRVSTSFQHATGHAEPPSWSDWKKACGTGYDFDVFMHRGAGAYICGEETALIESL 256 Query: 191 EGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLM 250 EG++ PR KPPFPA G +G PT V NVET+ P I G W+ + +++++GTKL Sbjct: 257 EGKQGKPRLKPPFPADVGVFGCPTTVTNVETVAVAPTICRRGGVWFASFGRTRNSGTKLF 316 Query: 251 GFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGL-KFKAWQPGGAGTDFLTEAHL-DLP 308 SG V P E +E++E + GG+ G PGG+ T + + D+ Sbjct: 317 NISGHVNRPCTVEEEMSIPLKELIERHCGGVTGGWDNLLGVIPGGSSTPIIPKNVCDDVI 376 Query: 309 MEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKIL 368 M+F+ + A + LGTA + +D +++ + L F+ ESCG CTPCR+G+ W KI+ Sbjct: 377 MDFDGLIAAQTSLGTAAIIVMDKSTDVIKAIARLISFYKHESCGQCTPCREGIGWMNKIM 436 Query: 369 RALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFE 420 +G+ QP +I+ L ++ + + G T CA GA P+Q I++FR E E Sbjct: 437 TRFVKGDAQPAEIDMLWEISKQI-EGHTICALGDGAAWPVQGLIRHFRPEIE 487 >UniRef50_B8ERX4 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=1 Tax=Methylocella silvestris BL2 RepID=B8ERX4_METSB Length = 603 Score = 256 bits (655), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 141/383 (36%), Positives = 207/383 (54%), Gaps = 14/383 (3%) Query: 40 KALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTY 99 KA SP++++ ++ ++ L+GRGGAGF TG+KW L K N RY++CNADE EPGT+ Sbjct: 201 KAALDQSPEQVIEEISNSKLRGRGGAGFPTGMKWRLTRKAVGEN-RYVICNADEGEPGTF 259 Query: 100 KDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKN 159 KDRLL+ + P L+ +GM I+ +AL A RG ++LRGEY L+ + + GLLG + Sbjct: 260 KDRLLLTEFPDLVFDGMTIAGYALGARRGVVYLRGEYAYLWDPLQEVLRDRRALGLLGAD 319 Query: 160 IMG-TGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNN 218 I G +GFDF++ + GAG Y+CGEE+AL+ S+EG+R PR +PPFP G +PT ++N Sbjct: 320 ICGRSGFDFDIRIQLGAGAYMCGEESALLESMEGKRGAPRDRPPFPTERGYLRQPTAIDN 379 Query: 219 VETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYA 278 VET I+ G W+ + GTKLM SG + PG++E+PFG T E+L+ Sbjct: 380 VETFACAARIVEKGAAWFTGFGTKESTGTKLMSVSGDCQRPGVYEVPFGITVNELLDLV- 438 Query: 279 GGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSL 338 G D + P G + + +E + GS M +++ + Sbjct: 439 -GAPDAEYVQISGPSGQS---VAPKDFGRRIAYEDLSTGGS------TMIFGPNRDVLDI 488 Query: 339 VRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFC 398 V +FF ESCGWC PCR G P + + + G DI E L + + C Sbjct: 489 VLQFADFFVHESCGWCAPCRVGAPLLKQGMEKIVAGRATLADIAATEALANTVM-RMSRC 547 Query: 399 AHAPGAVEPLQSAIKYFREEFEA 421 A P+ + + F E +EA Sbjct: 548 GLGQTAPNPILTTMLSFPELYEA 570 >UniRef50_Q1V283 NAD-dependent formate dehydrogenase beta subunit n=3 Tax=Candidatus Pelagibacter RepID=Q1V283_PELUB Length = 552 Score = 256 bits (653), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 155/416 (37%), Positives = 227/416 (54%), Gaps = 19/416 (4%) Query: 9 ETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFS 68 +++ T L DDK LD+++ + K EI + D+ L GRGGAGF Sbjct: 145 KSYASTSFLMDDKLS-NLDQFKEQ------LKKFIATDKQEITKSLLDSNLTGRGGAGFP 197 Query: 69 TGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRG 128 TG+KW K S +Y++CNADE + G + DR L+E P ++ GM+I + + + G Sbjct: 198 TGMKWDFCRKAPSEK-KYVICNADEGDSGAFSDRYLLEDQPLKVLFGMVICGYVIGSDEG 256 Query: 129 YIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALIN 188 +++RGEY ++ + AI +AGLLG+NI+GT F F+L + G G YICGEETALI Sbjct: 257 VLYIRGEYPKSIEAINGAINSLKKAGLLGENILGTKFSFDLNICIGQGAYICGEETALIA 316 Query: 189 SLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTK 248 S+EGRRA +PPFP T G + KPT VNNVETL IL NG + + I K AGTK Sbjct: 317 SIEGRRAEVDVRPPFPVTEGLYKKPTVVNNVETLAAATGILINGADKFSAIGNKKSAGTK 376 Query: 249 LMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGG--AGTDFLTEAHLD 306 L+ F NPG++E+ GT +++L D GG ++ + KA Q GG G +TE Sbjct: 377 LVCFDSFFNNPGVYEVEMGTPMKKVLNDIGGGFKEPI--KALQIGGPLGGVIPITEIE-K 433 Query: 307 LPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVK 366 L ++F+ AG LG A +++ + M+ + +L EF A ESCG C P R G S + Sbjct: 434 LNLDFQEFTAAGFMLGHASIVSIPKDFPMIEYIHHLFEFSAEESCGKCFPGRLG---SYR 490 Query: 367 ILRALERGEGQPGDI--ETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFE 420 ++ + + I + L +L + G CA P+ + +KYF +E + Sbjct: 491 GKEMFDQAKNKTAKIPLKLLNELLVTMQKG-CLCALCGAIPTPIMNILKYFGDEMK 545 >UniRef50_A6GJI0 Putative NADH dehydrogenase I chain F n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GJI0_9DELT Length = 503 Score = 253 bits (645), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 153/375 (40%), Positives = 220/375 (58%), Gaps = 19/375 (5%) Query: 47 PDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLME 106 PD I+ Q+K +GL+GRGGAGF +KW + + ++ RY++ NADE EPGT+KDR +M Sbjct: 145 PDWIIEQLKTSGLQGRGGAGFPAHIKWHAV-RTQAELTRYVVVNADEGEPGTFKDREIML 203 Query: 107 QLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFD 166 + PH ++EGM I+A+ A + +I++RGE+ + L AIAEA G D Sbjct: 204 RRPHRMIEGMAIAAWVAGAAKAFIYVRGEFRDCIRALEAAIAEA-----------GERLD 252 Query: 167 -FELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNV 225 ++ + G G YICGEETAL+ ++EG+R PR KPP+P G WGKPT +NNVETL V Sbjct: 253 WLDIEIVEGHGAYICGEETALLEAIEGKRGMPRLKPPYPTEKGLWGKPTLMNNVETLACV 312 Query: 226 PAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGL 285 P IL+ G EW++ + K+ +AG+KL SG V PG++ELP G + E++E AGG Sbjct: 313 PEILSRGGEWFKALGKT-EAGSKLYCISGHVGRPGIYELPLGVSLDELVE-AAGGYVG-- 368 Query: 286 KFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEF 345 KA+ PGGA + FL P++F + K GS LG+A + ++ ++M R + F Sbjct: 369 TPKAFSPGGASSGFLPMDLRGEPLDFGGLAKLGSMLGSAGVVVLNDTVDMAVAARWQQIF 428 Query: 346 FARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAV 405 F ESCG C PCR G + + P + +E++ + G + C A Sbjct: 429 FEDESCGQCAPCRIGCRVQRQAIDKFLDARA-PESLGHVEEVAWEMDAG-SICGLGMVAS 486 Query: 406 EPLQSAIKYFREEFE 420 PLQSA+KYF EEF+ Sbjct: 487 LPLQSAMKYFGEEFD 501 >UniRef50_Q1QYV5 NADH dehydrogenase (Quinone) n=66 Tax=Proteobacteria RepID=Q1QYV5_CHRSD Length = 595 Score = 251 bits (642), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 152/424 (35%), Positives = 231/424 (54%), Gaps = 28/424 (6%) Query: 1 MKNIIRTPETHP--LTWRLRDDKQPVWLDEYRSKNGYEGARKALTG-LSPDEIVNQVKDA 57 + ++I T HP + W+ L +YR++ GY G ++ + ++ ++ A Sbjct: 190 VASVIDTGHYHPEAILWQ--------RLADYRAEGGYALLADCHAGRVTVEALMQALETA 241 Query: 58 GLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGML 117 L+G GGAGF T KW+ + ++ RY NADE EPGT+KDR+ +E+ PH +EG L Sbjct: 242 NLRGLGGAGFPTFKKWTFVRQEA--GPRYCAINADEGEPGTFKDRVYLERSPHRFLEGAL 299 Query: 118 ISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGR 177 +SA+A++A YI+LR EY LR AIAE + GL+ + + + GAG Sbjct: 300 VSAWAVEAEALYIYLRDEYPGLHRVLREAIAELEDEGLVVPDY--------IVLRRGAGA 351 Query: 178 YICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQ 237 YICGEE+A+I SLEG+ PR +PPF A G + +PT VNNVET+ +P I G E + Sbjct: 352 YICGEESAMIESLEGKPGKPRHRPPFVAQRGLFDRPTLVNNVETVYWIPLIWQRGAEAFA 411 Query: 238 NISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGT 297 + G + SGRVK+PG+ P G T E++E+Y GGM +G + A+ PGGA Sbjct: 412 RQGRHGRVGLRSFSVSGRVKHPGVHLAPAGITLEELIEEYCGGMAEGHRLVAYLPGGASG 471 Query: 298 DFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPC 357 L + ++P++F+++ G +G+A + + + ++ ++ NL FFA ESCG CTPC Sbjct: 472 GILPASKANVPLDFDTLQAYGCFIGSAAVIVLSDQDDLRAVATNLLAFFADESCGQCTPC 531 Query: 358 RDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFRE 417 R G + +L EG D TL +L + + + C A P+ +K FR Sbjct: 532 RVGTEKMLTLL------EGDEWDAATLTRLSQVMMDA-SICGLGQAAPNPVLGLLKDFRG 584 Query: 418 EFEA 421 E A Sbjct: 585 ELAA 588 >UniRef50_A1SU84 Hydrogenase, NADP-reducing subunit C n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SU84_PSYIN Length = 588 Score = 251 bits (640), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 139/385 (36%), Positives = 207/385 (53%), Gaps = 16/385 (4%) Query: 36 EGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKW-SLMPKDESMNIRYLLCNADEM 94 E +KAL +P + + ++ +GL+G GGAGF T KW S + D+ N RY++CNADE Sbjct: 187 EAIKKAL-ATAPHDSLAEIDKSGLRGCGGAGFKTAEKWKSCLLSDD--NQRYVVCNADEG 243 Query: 95 EPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAG 154 EPGT+KDR+L+ LL+EGM + A+ + A +G+I+LR EY L + A Sbjct: 244 EPGTFKDRVLLNSYADLLIEGMTLCAYVIGAQKGFIYLRYEYQHLYKKLLETLQRRRAAN 303 Query: 155 LLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPT 214 LLG +I+ + F++ + GAG Y+CGEE+AL+ SLEGRRA PR +PPFP T G KPT Sbjct: 304 LLGAHILNSELSFDIEIFMGAGSYVCGEESALLESLEGRRAIPRIRPPFPVTHGYLDKPT 363 Query: 215 CVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREIL 274 VNNVET C I+ G E + + G K++ SG V+ G++E+P G + +L Sbjct: 364 VVNNVETFCYAALIIEKGAENFSAQGLAGFTGCKILSISGDVEKTGIYEIPLGLPVKNVL 423 Query: 275 EDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEIN 334 + +A Q GG +T A + F+ + GS M + + Sbjct: 424 -----NLCGAQSVQAVQVGGPSGTLITPAEFSRVISFDDLHTGGS------FMVFNQSRD 472 Query: 335 MVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPG 394 ++ N FF +ESCG+CTPCR G + + G+G D+++++QL + G Sbjct: 473 ILENALNFTHFFMQESCGFCTPCRVGTKLIYDLADKVATGQGARLDLDSIKQLNHVMN-G 531 Query: 395 KTFCAHAPGAVEPLQSAIKYFREEF 419 + C A EPL ++ F E F Sbjct: 532 MSHCGLGQRAAEPLLETLEKFPEYF 556 >UniRef50_P22317 NAD-reducing hydrogenase hoxS subunit alpha n=5 Tax=Bacteria RepID=HOXF_RALEH Length = 602 Score = 251 bits (640), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 133/329 (40%), Positives = 191/329 (58%), Gaps = 15/329 (4%) Query: 45 LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLL 104 L P++++ + D+ L+GRGGAGFSTGLKW L +D +Y++CNADE EPGT+KDR+L Sbjct: 203 LKPEQVIETIVDSRLRGRGGAGFSTGLKWRLC-RDAESEQKYVICNADEGEPGTFKDRVL 261 Query: 105 MEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMG-T 163 + + P + GM+I+A+A+ +G ++LRGEY L R + E E GLLG+ I G Sbjct: 262 LTRAPKKVFVGMVIAAYAIGCRKGIVYLRGEYFYLKDYLERQLQELREDGLLGRAIGGRA 321 Query: 164 GFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLC 223 GFDF++ + GAG YICG+E+ALI S EG+R PR KPPFP G GKPT VNNVET Sbjct: 322 GFDFDIRIQMGAGAYICGDESALIESCEGKRGTPRVKPPFPVQQGYLGKPTSVNNVETFA 381 Query: 224 NVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRD 283 V I+ G +W++ + AGT+L+ +G PG++E+ +G T E+L G RD Sbjct: 382 AVSRIMEEGADWFRAMGTPDSAGTRLLSVAGDCSKPGIYEVEWGVTLNEVLA--MVGARD 439 Query: 284 GLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLE 343 + P G + L E S A + + + +++ +VR+ Sbjct: 440 ARAVQISGPSGECVSVAKDGERKLAYEDLSCNGAFT--------IFNCKRDLLEIVRDHM 491 Query: 344 EFFARESCGWCTPCRDGLPWSVKILRALE 372 +FF ESCG C PCR G +V + R +E Sbjct: 492 QFFVEESCGICVPCRAG---NVDLHRKVE 517 >UniRef50_B1CAU2 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CAU2_9FIRM Length = 416 Score = 249 bits (635), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 139/400 (34%), Positives = 229/400 (57%), Gaps = 4/400 (1%) Query: 26 LDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIR 85 +DEY + G++G +K++ ++ V V D+GL+GRGGA + TG K + + + R Sbjct: 19 IDEYIKRGGFKGLKKSIL-QGYEKTVKDVSDSGLQGRGGANYPTGRKLTQAREAKGNGDR 77 Query: 86 YLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRR 145 Y+LCNADE EPGT+KD+ L++ + ++EG++ISAF A +GYI++R EY ++ Sbjct: 78 YILCNADEGEPGTFKDKYLLQNGIYKVIEGIIISAFCAGANKGYIYVREEYTFMHKDIEF 137 Query: 146 AIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPA 205 AI + + G LG++I+ +GFDF+L + +G G Y+CGE A+ S+EG+ PRSKPP+ Sbjct: 138 AIKQVYDKGFLGEDILSSGFDFDLSLFSGGGSYVCGEGFAMCESIEGKSGRPRSKPPYVK 197 Query: 206 TSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELP 265 G KPT V NVET+ + ++ NG + GTK++ SG+VK+PG++E+ Sbjct: 198 ECGLHNKPTLVINVETVSVIATMMQNGFKTVLKYGVEDCPGTKMVCVSGKVKHPGVYEVE 257 Query: 266 FGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTAL 325 FGTT + I++ AGG++ G K K Q GGA + L++P + + K +G+ Sbjct: 258 FGTTVQNIIKI-AGGIKGGKKAKFVQIGGASGVIVPYEKLNIPYTYSGMKKVKGNIGSGA 316 Query: 326 AMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLE 385 + D + +++ + +E+FF E CG C PCR+G KI+ + +G D++ Sbjct: 317 IVVADEDDSVIDYLSVVEDFFFHECCGKCVPCREGNRQLKKIMDRFKIKQGTLTDLKNYV 376 Query: 386 QLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 ++ L + C + P SA F +EF+ +K+ Sbjct: 377 RIVNALDA--SLCGSGKAQIIPFISAYTNFSQEFKNALKR 414 >UniRef50_A3EW61 NADH dehydrogenase (Quinone) n=3 Tax=Bacteria RepID=A3EW61_9BACT Length = 453 Score = 246 bits (627), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 140/397 (35%), Positives = 223/397 (56%), Gaps = 3/397 (0%) Query: 26 LDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIR 85 L Y GYEG R+ L LSP E + ++K+AGL+GRGG+GF T +KW + + + Sbjct: 32 LSTYLKDGGYEGLRRVLGNLSPSEAIEELKEAGLRGRGGSGFPTAIKWEKV-AHHRIREK 90 Query: 86 YLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRR 145 Y++ N E EPG++KD L+E PH ++EGM+I++FA++A + +F++ + L++ Sbjct: 91 YVVANGSEGEPGSHKDHFLIETNPHQILEGMIIASFAVRARKAILFVKDSFPRGIDALKK 150 Query: 146 AIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPA 205 A EA E G LG I+G+ +L + G YI GEETAL+ +LEGR PR KPP Sbjct: 151 ARDEAREEGFLGDRILGSELSLDLEIFVGPSAYIAGEETALLEALEGRLPKPRPKPPGYP 210 Query: 206 TS-GAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWEL 264 T G + PT VNNVET +V I +G W++ K GT + +G VK P + EL Sbjct: 211 TDRGLYNCPTVVNNVETYAHVSHIFRHGAHWFKRRGLPKSPGTMVFSVTGSVKRPIVVEL 270 Query: 265 PFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTA 324 P GT+ R ++E+YAGG DG + +++ PGG L LD P++++++ GS +G+ Sbjct: 271 PLGTSLRTLVEEYAGGAPDGERIESFYPGGPSFGVLPAKDLDTPLDYDALRALGSGIGSG 330 Query: 325 LAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETL 384 + + + V+ R F+ SCG C PCR G +IL E G+ +++ + Sbjct: 331 GVIVLSDKDCPVATARQFAAFYETGSCGQCPPCRIGTENLHEILELFENGKASRENVQRI 390 Query: 385 EQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEA 421 ++ + G+ C + ++S +++F EEF++ Sbjct: 391 LRISDMI-KGRGNCGLITASAYSVESLVRHFPEEFQS 426 >UniRef50_D0IAF4 NAD-reducing hydrogenase hoxS subunit alpha n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0IAF4_VIBHO Length = 609 Score = 244 bits (623), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 140/394 (35%), Positives = 214/394 (54%), Gaps = 18/394 (4%) Query: 39 RKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGT 98 R A+T L P E+++ + L+GRGGAGFS GLKW L D + + +Y++CNADE EPGT Sbjct: 198 RDAVT-LVPMEVIDATSTSKLRGRGGAGFSAGLKWRLC-HDAAGDTKYVICNADEGEPGT 255 Query: 99 YKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGK 158 +KDR+++ + P + GM+I+ +A+ A G ++LR EY L + + E LLG Sbjct: 256 FKDRVILTESPEQVFAGMIIAGYAIGAREGILYLRYEYRYLVDYLEKTLNSLRERNLLGA 315 Query: 159 NIMGTG-FDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVN 217 I G F F++ + GAG YICG+E+ALI S EG+R PR KPPFP G G PT VN Sbjct: 316 KIGGNDKFSFDIRIQLGAGAYICGDESALIESCEGKRGTPRVKPPFPVHQGFMGCPTAVN 375 Query: 218 NVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDY 277 NVETL NV I G WY+++ ++ AGT+L+ SG V+ PG++E+ +G + +++LE Sbjct: 376 NVETLANVARIFEKGARWYESMGTAESAGTRLISVSGDVEKPGIYEIEWGISLKDVLE-- 433 Query: 278 AGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVS 337 G R+ + P G + + ++ + GS M +E N++ Sbjct: 434 LVGARNPRVAQISGPSGECVSAAKDG--NRVFSYKDLSCNGS------LMVFSYERNLLE 485 Query: 338 LVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTF 397 +VR FF ESCG CTPCR G + + G D++ + + + G + Sbjct: 486 IVRRFIHFFMEESCGICTPCRAGNVELYNKVSLIIEGRAVEQDLDEIVEWANII-RGSSR 544 Query: 398 CAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTH 431 C + +P+ ++++ F EE+ KQ H Sbjct: 545 CGLGTTSPKPIITSMQAFPEEY----KQKLVTQH 574 >UniRef50_A1Z9Z7 CG8102, isoform A n=7 Tax=melanogaster subgroup RepID=A1Z9Z7_DROME Length = 481 Score = 240 bits (613), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 131/377 (34%), Positives = 205/377 (54%), Gaps = 4/377 (1%) Query: 47 PDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNI-RYLLCNADEMEPGTYKDRLLM 105 P+ I+ QV +GL+GRGGAGF GLKW + + +S + + ++ N E EPGT KDR ++ Sbjct: 96 PEWIMKQVSKSGLRGRGGAGFYAGLKWEFLRQTKSEKVPKMVIVNCAEGEPGTCKDRDIL 155 Query: 106 EQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGF 165 PH L+EG+L+ A+ R +++R + A NL A+AEA GLLG ++ GTG Sbjct: 156 RHEPHKLIEGILLVGVAMGCGRAIVYIRNRFYNEACNLHFALAEAYHHGLLGNSVCGTGI 215 Query: 166 DFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNV 225 F++ V G RY+CGEETA+IN L G+ PR +PPF G + P V N E++ V Sbjct: 216 KFDVMVQRG-DRYLCGEETAMINCLMGKLGRPRRRPPFLTEKGYFEHPCLVINAESIAVV 274 Query: 226 PAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGL 285 P IL G +W+ + +S + GTKL SG+V NP E ++++E +AGG++ G Sbjct: 275 PTILRRGSQWWAGLGRSYNTGTKLYCLSGQVNNPCTVEEEMSIPLKDLIERHAGGVKGGW 334 Query: 286 -KFKAWQPGGAGTDFLTEAHL-DLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLE 343 A PGG T L + + M+F+S+ AGS G + + + + ++++ Sbjct: 335 DNLAAVFPGGLSTPLLDPSTAGKVLMDFDSLTDAGSGFGCGAVIVMTKDCDPLAIMLRSI 394 Query: 344 EFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPG 403 +FF + +C C+ CRDG W +I +G+ P +I+ + + K CA A Sbjct: 395 QFFEKHTCKQCSYCRDGAIWLPEIFARFVKGQTHPHEIDWTLVIADKMRNSKPICALAYS 454 Query: 404 AVEPLQSAIKYFREEFE 420 V +S ++ F + E Sbjct: 455 QVSVAESLVRMFSRKIE 471 >UniRef50_UPI0001AF5A30 NADH dehydrogenase I subunit F n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF5A30 Length = 148 Score = 238 bits (607), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 111/137 (81%), Positives = 123/137 (89%) Query: 4 IIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRG 63 I RT ETHPLTWRLRDD +PVWLDEY++K+GY ARKALT +PD+IV VKD+GLKGRG Sbjct: 12 ITRTAETHPLTWRLRDDGEPVWLDEYQTKDGYAAARKALTQQAPDDIVQSVKDSGLKGRG 71 Query: 64 GAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFAL 123 GAGF TG+KW LMPKDESMNIRYLLCNADEMEP T+KDR+LMEQLPHLL+EGMLISA AL Sbjct: 72 GAGFPTGVKWGLMPKDESMNIRYLLCNADEMEPNTWKDRMLMEQLPHLLIEGMLISARAL 131 Query: 124 KAYRGYIFLRGEYIEAA 140 KAYRGYIFLRGEY+ AA Sbjct: 132 KAYRGYIFLRGEYVTAA 148 >UniRef50_A2DV30 Respiratory-chain NADH dehydrogenase 51 Kd subunit family protein n=1 Tax=Trichomonas vaginalis RepID=A2DV30_TRIVA Length = 425 Score = 238 bits (607), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 128/372 (34%), Positives = 208/372 (55%), Gaps = 6/372 (1%) Query: 50 IVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLP 109 I+++V+ + L+GR GAG T KW + + + YL N +E EPGT KDR +++ P Sbjct: 52 ILDEVRKSELRGRSGAGLLTYKKWEEILTSKQLP-HYLCINGNESEPGTCKDRQILQNEP 110 Query: 110 HLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFEL 169 ++EG ++++AL +R Y+++RG Y + A L+ AI EA +A L+GKN G+DFE+ Sbjct: 111 QKIIEGAFLASYALDVHRCYVYVRGHYTKEAKRLQLAIDEAKKANLIGKN-NKFGWDFEI 169 Query: 170 FVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAIL 229 VH GAG Y+CGE+T L+ SLEG PR KPP P G + PT V+NVET+ + +I Sbjct: 170 NVHPGAGAYVCGEQTGLMTSLEGNPGTPRQKPPQPFEKGLFQCPTVVDNVETISTISSIC 229 Query: 230 ANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGL-KFK 288 G +W+ ++ G K+ SG V P + E G + +E+++ + G+R G + Sbjct: 230 RRGGKWFSSLGIPGSRGPKIYQISGHVNRPCIVEETLGMSLKELIDVHGSGVRGGWDNLQ 289 Query: 289 AWQPGGAGTDFLT-EAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFA 347 PGG +T E + + F+ + K GS LGT + +D+ ++V + R + F+ Sbjct: 290 CIIPGGTSCPPITKEQAKNAILGFDEMSKIGSGLGTGSLVVIDNTADIVEVYRRIANFYK 349 Query: 348 RESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEP 407 E CG C C +G +I + RG+G D++ LE++ G K C+ + GA +P Sbjct: 350 DECCGQCKQCVEGTETMAEIFDKIARGKGTKDDVKHLEEVA--FGMKKYICSFSVGASDP 407 Query: 408 LQSAIKYFREEF 419 ++ +K F+ + Sbjct: 408 IRGFLKVFKNKL 419 >UniRef50_A0K164 NADH dehydrogenase (Quinone) n=2 Tax=Actinomycetales RepID=A0K164_ARTS2 Length = 566 Score = 237 bits (605), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 139/315 (44%), Positives = 192/315 (60%), Gaps = 2/315 (0%) Query: 46 SPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLM 105 +P++I+ +V+ A L+GRGGAGF KW + R ++ N DE +PG+Y DRLLM Sbjct: 197 TPEDILLRVEAAQLRGRGGAGFRAAAKWRAALDHPAP--RVVVANGDEGDPGSYADRLLM 254 Query: 106 EQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGF 165 EQ H ++EG++++ FA+ A G +F+R EY AA LR A+ EA AG LG +I G+GF Sbjct: 255 EQDAHRVLEGLVLACFAVGATTGIVFVRSEYPLAAARLRNALHEARRAGHLGPDIAGSGF 314 Query: 166 DFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNV 225 E+ V GAG Y+ GEETAL+N L G R R +PPFP G G+PT VNNVETLC V Sbjct: 315 SLEVRVAEGAGSYVSGEETALLNGLAGLRGVVRPRPPFPTERGFHGRPTVVNNVETLCAV 374 Query: 226 PAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGL 285 P I+ +G Y + S +AGT + S R PG +E+ GT R I+E+ GG+R G Sbjct: 375 PWIVQHGGPAYAALGTSDEAGTVIACLSERFLRPGAYEVEIGTPVRRIVEELGGGLRGGA 434 Query: 286 KFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEF 345 +A Q GG FL LD+P+ ++ + G+ LG A +A D ++ ++RNL +F Sbjct: 435 TLRAIQIGGPLGGFLGPDDLDVPLSDTALARHGAALGHAGIVAFDDRLSGEQVLRNLWDF 494 Query: 346 FARESCGWCTPCRDG 360 A ESCG C+PCR G Sbjct: 495 AAAESCGQCSPCRVG 509 >UniRef50_C6I0C0 NADH dehydrogenase (Quinone) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I0C0_9BACT Length = 475 Score = 235 bits (599), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 148/401 (36%), Positives = 230/401 (57%), Gaps = 7/401 (1%) Query: 26 LDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIR 85 L Y GY+G R+ L+GLSP +++ ++K++GL+GRGG+GF T LKW + + + +R Sbjct: 46 LASYERGGGYKGLRRVLSGLSPSDVIAEIKESGLRGRGGSGFPTALKWEKV-ANHRVPVR 104 Query: 86 YLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRR 145 Y++ N E EPG++KD L+ + PH ++EGM+I+ FA+ A G++F++ + E LR+ Sbjct: 105 YVVANGSEGEPGSHKDHYLISRSPHQILEGMIIACFAVSAKSGHLFVKESFPEGINILRK 164 Query: 146 AIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPA 205 A EA AGLLG NI+G+GF ++ + G YI GEETAL+ +LEGR PR KPPF Sbjct: 165 AREEALAAGLLGNNILGSGFSVDIEIFVGPAAYIAGEETALLEALEGRVPRPRPKPPFYP 224 Query: 206 TS-GAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWEL 264 T G + KPT VNNVET +V ILA G ++ K GT + SG V+ P + EL Sbjct: 225 TEMGLYNKPTVVNNVETYAHVSRILAEGTVKFRERGTPKSPGTMIFSVSGSVRRPVVVEL 284 Query: 265 PFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTA 324 P G + +L DYAGG G F+ + GG L +D P+E++++ G+ LG+A Sbjct: 285 PLGFSLERLLYDYAGGPLPGETFQCFFTGGPSFGILPAREIDTPLEYDALRAKGTGLGSA 344 Query: 325 LAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETL 384 + + + ++++ EF+ + SCG C PCR G + L L G+ IE L Sbjct: 345 GIIVLGSKDSILATTAAFSEFYEKGSCGQCPPCRLGTESLHQTLEGLMNGQNSEDGIERL 404 Query: 385 EQLCRFLGPGKTFCAHAPGAVEPLQSAIKYF----REEFEA 421 ++ + + G+ C + ++S +++F REE + Sbjct: 405 LKVTKMI-KGRGNCGLITASAFMVESLLEHFTPLLREELAS 444 >UniRef50_A1WBG0 NADH dehydrogenase (Quinone) n=11 Tax=Proteobacteria RepID=A1WBG0_ACISJ Length = 640 Score = 233 bits (593), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 140/399 (35%), Positives = 213/399 (53%), Gaps = 20/399 (5%) Query: 26 LDEYRSKNGYEGARKALTG-LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNI 84 L YR+ GY+ A + G + + ++ ++D+GL+G GGAGF G KW ++ +D+ Sbjct: 232 LVTYRAHGGYQTAAALVNGEMDAEAVLAAMEDSGLRGLGGAGFPAGRKWRIV-RDQPAP- 289 Query: 85 RYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLR 144 R + N DE EPGT+KDR +E+ PH +EG+LI+A + YI+LR EY L+ Sbjct: 290 RLMAVNIDEGEPGTFKDRTYLERDPHRFLEGVLIAAQVVGTEAVYIYLRDEYHGCRALLQ 349 Query: 145 RAIAEA-TEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPF 203 A+ E E+ +I + GAG YICGEE+A+I S+EG+R PR +PP+ Sbjct: 350 SALEELRAESPCPLPHIE---------LRRGAGAYICGEESAMIESIEGKRGEPRMRPPY 400 Query: 204 PATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWE 263 A G +G+PT +N ETL V I+ G +W+ + + G + SGRVK PG+ Sbjct: 401 IAQVGLFGRPTLEHNFETLYWVRDIVEKGPQWFASFGRHGRRGLRSFSVSGRVKEPGVKL 460 Query: 264 LPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGT 323 P G T RE++++Y GGM DG A+ PGGA L D+P++F+++ G +G+ Sbjct: 461 APAGITLRELVDEYCGGMADGHVLYAYLPGGASGGILPARLSDVPLDFDTLQPHGCFIGS 520 Query: 324 ALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIET 383 A + + N+ FFA ESCG CTPCR G + ++++A D +T Sbjct: 521 AAVIVLSQHDRARDAALNMMRFFAHESCGQCTPCRVGTAKAAQLMQA------PLWDEDT 574 Query: 384 LEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAG 422 L+ L + + + C A P++ KYF E G Sbjct: 575 LDDLAQVMA-DASICGLGQAAPNPIRCIHKYFAHEVGEG 612 >UniRef50_B9MEW2 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=2 Tax=Comamonadaceae RepID=B9MEW2_DIAST Length = 661 Score = 228 bits (581), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 149/446 (33%), Positives = 220/446 (49%), Gaps = 50/446 (11%) Query: 4 IIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSP-DEIVNQVKDAGLKGR 62 I R PE W V L YR++ GY A G P D ++ ++D+GL+G Sbjct: 211 ITRGPEAVAPPW--------VGLAAYRARGGYALAAGLAQGHVPADGVLAAMEDSGLRGL 262 Query: 63 GGAGFSTGLKWSLM------------------------PKD--ESMNIRYLLCNADEMEP 96 GGAGF G KW ++ P++ E ++ + N DE EP Sbjct: 263 GGAGFPAGRKWRIVREQAALAGRQAAPSEAAAPSAGSGPREAGERGSVALMAVNIDEGEP 322 Query: 97 GTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLL 156 GT+KDR +E+ PH +EG+L++A + YI+LR EY L+ AIAE L Sbjct: 323 GTFKDRTYLERDPHRFLEGVLVAAQVVGTAEVYIYLRDEYHGCRALLQAAIAE------L 376 Query: 157 GKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCV 216 + EL GAG YICGEE+A+I S+EG+R PR +PP+ A G +G+PT Sbjct: 377 QADPPCALPRIEL--RRGAGAYICGEESAMIESIEGKRGEPRMRPPYIAQVGLFGRPTLE 434 Query: 217 NNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILED 276 +N ETL V I+ G +W+ + + G + SGRVK PG+ P G T RE++++ Sbjct: 435 HNFETLYWVRDIVEKGPQWFASFGRHGRRGLRSFSVSGRVKEPGVKLAPAGITLRELVDE 494 Query: 277 YAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMV 336 Y GGM +G A+ PGGA L D+P++F+++ G +G+A + + Sbjct: 495 YCGGMAEGHVLYAYLPGGASGGILPARLADVPLDFDTLQPHGCFIGSAAVIVLSQHDRAR 554 Query: 337 SLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKT 396 N+ FFA ESCG CTPCR G + ++++A D +TL+ L + + + Sbjct: 555 DAALNMMRFFAHESCGQCTPCRVGTAKAAQLMQA------PLWDEDTLDDLAQVMA-DAS 607 Query: 397 FCAHAPGAVEPLQSAIKYFREEFEAG 422 C A P++ KYF E G Sbjct: 608 ICGLGQAAPNPIRCIHKYFAHEVGEG 633 >UniRef50_UPI0000384AE3 COG1894: NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000384AE3 Length = 514 Score = 226 bits (577), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 141/373 (37%), Positives = 202/373 (54%), Gaps = 23/373 (6%) Query: 45 LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLL 104 L DE++ +++ AGL+G GGAGF T KW + R ++ NADE EPGT+KDR Sbjct: 162 LPRDEVLAELERAGLRGMGGAGFPTARKWRAVAARP--GPRLVVVNADEGEPGTFKDRWF 219 Query: 105 MEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTG 164 ++ ++EG LI+A+A++A Y++LR EY A LL I Sbjct: 220 LQTNAARVLEGALIAAWAVEADEVYLYLRDEY-------------ADLHKLLTVLIRALP 266 Query: 165 FDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCN 224 + + GAG Y+CGEE+ALI SLEG+R PR +PP+ A G +G+PT VNNVETL Sbjct: 267 GSVPVHLRRGAGAYVCGEESALIESLEGKRGLPRQRPPYVAEVGLFGRPTVVNNVETLYW 326 Query: 225 VPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDG 284 V ILA G E + + ++ G + SGRV+ PG+ P G T E++E++ GGM DG Sbjct: 327 VSRILAEGAELFTDEGRNGHRGLRTYSVSGRVRLPGVKIAPNGITITELIEEFCGGMEDG 386 Query: 285 LKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEE 344 + +A+ PGGA FL AH+ P+ F +I + G +G+A + E ++ + NL Sbjct: 387 HQLRAYLPGGASGGFLP-AHVTPPLAFGAIEEHGGFIGSAAVVVFSQEDDLRAHALNLAR 445 Query: 345 FFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGA 404 FFA ESCG CTPCR G + +L + E D L Q+ R + C A Sbjct: 446 FFAHESCGQCTPCRVGTAKAADLLASPRWDEDLLND---LAQVMR----DASICGLGQAA 498 Query: 405 VEPLQSAIKYFRE 417 QS +++F E Sbjct: 499 PNVWQSLLRHFPE 511 >UniRef50_O94500 NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial n=1 Tax=Schizosaccharomyces pombe RepID=NDUV1_SCHPO Length = 452 Score = 218 bits (555), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 131/407 (32%), Positives = 212/407 (52%), Gaps = 8/407 (1%) Query: 20 DKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKW-SLMPK 78 +K+ +D+ + YE + L P I+ V+++ L+GRG GF TG K SL Sbjct: 40 EKRIRRIDDALADGEYENLSEILK-YDPLNIIELVQESELRGRGRYGFPTGEKMLSLYKA 98 Query: 79 DESMNIR----YLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRG 134 S R ++ NA E + G++KDRLL+ PH ++EG +I+A A++A Y+F+R Sbjct: 99 TSSERGRKEKPVVIVNAAENDIGSFKDRLLLRHEPHKIIEGAIIAARAVEASACYLFIRK 158 Query: 135 EYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRR 194 +Y E V +++ I +A LLGKN++GT EL +H GAG YI GEE+ALI SL+G Sbjct: 159 DYYEETVMMQKCIIQAYAKKLLGKNLLGTSIGLELLIHPGAGSYITGEESALIQSLQGEF 218 Query: 195 ANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSG 254 P TSG +G PT V NVET+ N+PAI+ G +++ ++ + + GTKL SG Sbjct: 219 PVPDIPINNTITSGLFGLPTLVLNVETVSNLPAIIKKGPKFFISMGRPNNRGTKLFSISG 278 Query: 255 RVKNPGLWELPFGTTAREILEDYAGGMRDG-LKFKAWQPGGAGTDFLTEAHLD-LPMEFE 312 V P + E ++++E+YAGG+R G K PGG + L + + + M+F+ Sbjct: 279 EVNEPNVIEACMSIPLKDLIENYAGGVRGGWNKLVGIFPGGPCSGILNKNQCEQVTMDFD 338 Query: 313 SIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALE 372 S+ S LGT + ++ + + N +F++ +C C CRDG+ ++ L+ L+ Sbjct: 339 SLKALDSSLGTGSVIVLNDHDQIFESLLNFAKFYSTNTCHTCPVCRDGVEDVIETLKGLK 398 Query: 373 RGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEF 419 G ++ + K FC + S + F ++ Sbjct: 399 DGHAHLSQLKDMFSKFNMPSSSKVFCGFGDSMRHQIHSIQRNFPDQI 445 >UniRef50_Q293C9 GA20825 n=4 Tax=Drosophila RepID=Q293C9_DROPS Length = 445 Score = 213 bits (543), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 118/356 (33%), Positives = 186/356 (52%), Gaps = 3/356 (0%) Query: 72 KWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIF 131 +W+ + ES + L+ N E EPGT KDR ++ PH ++EG L++ FA+ R I+ Sbjct: 87 QWNFLRCAESKQDKVLVMNCAEGEPGTCKDREIIRHEPHKIIEGCLLAGFAMGCNRAIIY 146 Query: 132 LRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLE 191 +R + A NL+ A+AEA GLLG + TG F++ V G RY+CGEETAL+ L Sbjct: 147 VRNRFYNEACNLQFALAEAYRYGLLGPSACDTGIKFDILVQRG-DRYLCGEETALVKCLM 205 Query: 192 GRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMG 251 G+ PR +PPF G + P V N E++ +P IL G W+ ++ +S ++GTKL Sbjct: 206 GKIGRPRRRPPFLTEQGYFSHPCVVINAESIAVLPTILRRGASWWADLGRSYNSGTKLFN 265 Query: 252 FSGRVKNPGLWELPFGTTAREILEDYAGGMRDGL-KFKAWQPGGAGTDFLT-EAHLDLPM 309 SG+V +P E R+++E +AGG+R G A PGG T + + ++ M Sbjct: 266 ISGQVNSPCTVEEEMSMPMRDLIEKHAGGVRGGWDNLLAIFPGGLSTPLINKQVAGEVLM 325 Query: 310 EFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILR 369 +FE + AGS G+ + V+ + + + ++ +F+ + +C CT CRDG W ++ Sbjct: 326 DFECLEAAGSSFGSGALIVVNKQSDPLQVMLRSIQFYEKHTCKQCTYCRDGAIWLPELFD 385 Query: 370 ALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 +GE P +I+ + + + C A G V S + FR E I Q Sbjct: 386 RFVKGEAHPHEIDWTLAIGKKIKDSNPICGLAQGQVNVAVSLVDNFRPYIEDRILQ 441 >UniRef50_B2UIT6 NADH dehydrogenase (Quinone) n=6 Tax=Betaproteobacteria RepID=B2UIT6_RALPJ Length = 525 Score = 211 bits (537), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 137/392 (34%), Positives = 204/392 (52%), Gaps = 16/392 (4%) Query: 30 RSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLC 89 R E AR+ ++P +VN V + L+GRGGA F G+KW + +Y++ Sbjct: 147 RGGAALEKARR----MAPQALVNMVAASRLRGRGGAAFPAGIKWQAV-ASACAETKYVVV 201 Query: 90 NADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAE 149 NADE +PG + DR L+E+ P L+E I+A A+ A RGYI++R EY +A + A+ + Sbjct: 202 NADEGDPGAFSDRFLLEEDPFRLIEATAIAAHAVGARRGYIYIRKEYPDAVRVMSHALEQ 261 Query: 150 ATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGA 209 A AG LG + + EL V G G YICGEET+L+N+LEGRR R +PP + G Sbjct: 262 ARVAGWLGPTL-----ELELVV--GQGAYICGEETSLLNALEGRRPEVRPRPPQISECGL 314 Query: 210 WGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTT 269 +G PT V+NVETLC +P I+ +G Y + S GTKL+ + + PGL+E+ FG + Sbjct: 315 FGAPTLVHNVETLCAIPWIVTHGAAAYAALGFSNSRGTKLLSLNSLFRRPGLYEVEFGIS 374 Query: 270 AREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAV 329 +++E G+R G K GG + LD + +E + +G +A Sbjct: 375 LADVVEQLGQGLRRG-KLNGLMVGGPLAGIVPPTLLDTRLGYEEMQTIDCAVGHGGVIAF 433 Query: 330 DHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCR 389 + ++ +V + F ARESCG CTPC G P + A P D + +L Sbjct: 434 ADDTSIPRIVAQVLRFGARESCGKCTPCHLGTP--ILAAMADAAANRLPVDADRFRRLID 491 Query: 390 FLGPGKTFCAHAPGAVEPLQSAIKYFREEFEA 421 L + C H G E +QS +++ E +A Sbjct: 492 ALA-ATSLCGHGRGLAEFVQSVRRHYPSELQA 522 >UniRef50_Q1PZQ6 Similar to NADH dehydrogenase I chain F (1st module) EC: 1.6.5.3 n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZQ6_9BACT Length = 675 Score = 189 bits (481), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 128/403 (31%), Positives = 202/403 (50%), Gaps = 22/403 (5%) Query: 27 DEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRY 86 +EY G KA +SP++IV ++ +GL+GRGGAGF TG+KW + + + RY Sbjct: 241 EEYLCATGENAVHKA-RAMSPEQIVTELLASGLRGRGGAGFPTGVKWRTLVR-HTCPTRY 298 Query: 87 LLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRA 146 ++CNA E EPGT+KDR L+ + P+ +EGMLI+A A+ A YI L+ + + +R+A Sbjct: 299 VVCNAAEGEPGTFKDRYLLRKNPYATIEGMLIAAHAVNAAGIYIALKRSFGPSIERVRQA 358 Query: 147 IAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPAT 206 I+E GL+ E+ + G Y+ GEE AL+N +EG PR P Sbjct: 359 ISEMASKGLMD--------GIEIKIVEGPEEYLFGEEKALLNVVEGFPPMPREAYCPPYE 410 Query: 207 SGAWGKPTCVN-----NVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGL 261 G + P N N +TL +VP+I+ +G ++ + +GT + G V+ PG+ Sbjct: 411 IGLFATPNSPNPALLDNAQTLAHVPSIVRHGGASFRRLGTHDTSGTLIFTVCGDVQRPGV 470 Query: 262 WELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRL 321 +E G T R++ D AGG G +FK G A L + D P EF++ GS L Sbjct: 471 YECEAGITLRKLFYDVAGGPHTGRQFKVALSGVACGVILAD-RFDTPTEFDAFQMIGSGL 529 Query: 322 GTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSV----KILRALERGEGQ 377 G+A + +D+ ++ + + + F ESC C C+ GL + ++L+ L + + Sbjct: 530 GSAGFIVLDNAASIPRVTQAVARFLYVESCNQCPACKAGLRTASHGIDELLQHLHLHDDR 589 Query: 378 PGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFE 420 G +E P C + + ++ FREEFE Sbjct: 590 AGLDWIMEGA--HSAPQANRCFLPAQGAKLIPGLVQSFREEFE 630 >UniRef50_D1C1S2 NADH dehydrogenase (Quinone) n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C1S2_SPHTD Length = 442 Score = 183 bits (465), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 128/396 (32%), Positives = 188/396 (47%), Gaps = 16/396 (4%) Query: 26 LDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIR 85 L EYR++ GY A SP+E+ N + +GL+GRGGA F TG KW + + R Sbjct: 32 LMEYRAQGGYAPEGWAW---SPEELRNLIAASGLRGRGGAAFPTGRKWHGVAAQPAP--R 86 Query: 86 YLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRR 145 +L NA E EP + KDR L+ + PHL++EG L++A A+ A ++L E +L Sbjct: 87 VVLVNAAESEPASAKDRTLLLRRPHLVLEGALLAARAIDAREIVLYLHATATEVRASLEL 146 Query: 146 AIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPA 205 A+ E G+ + + T Y+ GE +A + G A P KPP P+ Sbjct: 147 ALRELRADGVQTPHFR---------IVTAPPGYVAGESSAAVRRANGGPAKPTFKPPRPS 197 Query: 206 TSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELP 265 G +PT V NVETL NVP I +G W + + GT L+ SG V PG++E+P Sbjct: 198 ERGVGKRPTLVQNVETLGNVPLIARHGANWLREVGAPNLPGTLLVTLSGAVNRPGVYEVP 257 Query: 266 FGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLD--LPMEFESIGKAGSRLGT 323 G R I+E+ GG+ G +A GG +L L+ +E ES+ G LG Sbjct: 258 SGVPLRHIVEELGGGVIGGASIQAMLVGGYFAGWLGPDALEQGARLEPESLRAWGVSLGA 317 Query: 324 ALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIET 383 + V + I ++ L FFA ES C C G + L RG P + + Sbjct: 318 GAIVVVPNWICGLAQAAWLMRFFADESAQQCGTCLYGTRAMADVFARLLRGTASPSERDR 377 Query: 384 LEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEF 419 L + PG+ C H GA ++A++ F ++ Sbjct: 378 LHLWAERMLPGRGACGHLDGAAIAARTALEVFADDI 413 >UniRef50_UPI00016C4299 NADH dehydrogenase (quinone) n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4299 Length = 686 Score = 177 bits (449), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 132/437 (30%), Positives = 204/437 (46%), Gaps = 76/437 (17%) Query: 53 QVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLL 112 ++K A L G GGAG KW L + N +Y++CN DE EPGT+KDR ++ ++PHL+ Sbjct: 244 ELKTANLLGMGGAGAPAYQKW-LDVWQQPGNEKYIVCNGDESEPGTFKDREILLRMPHLV 302 Query: 113 VEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVH 172 VEG++++ A G+I++R EY E L+ I A E G G NI G+G +F + V Sbjct: 303 VEGVILAGLMTGATSGHIYVRHEYFEQIHALKEEIKRAQELGACGPNIFGSGRNFPVEVF 362 Query: 173 TGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANG 232 G YICGE++ALI ++E RR PR++PP + +G KPT VNNVETL P I+ G Sbjct: 363 ESPGGYICGEQSALIEAMEDRRGQPRNRPPELSANGFRDKPTVVNNVETLAWAPGIILFG 422 Query: 233 VEWYQ-------NISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREIL--EDYAGGMRD 283 + Y+ K K G +L SG V PG++E+ G T E+ + Y GG+ Sbjct: 423 GDKYEMGGWRLATDPKIKFGGRRLFSVSGDVARPGVYEVAIGLTLGELFNGDKYCGGITG 482 Query: 284 GLK-FKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGS----------------------- 319 L+ A P G L A L + +F++ +A + Sbjct: 483 PLRAVAASGPSGG----LVPAKLPVDPKFDAKKRADAVARIRDRSAQDADFMEWFLNTHL 538 Query: 320 --------------------RLGTALAMAVDH-----------EINMVSLVRNLEEFFAR 348 L AL + V+ +++++ N +F+ Sbjct: 539 PLGATELDVLKIPLDLNFFRHLNGALRLPVEAMLGAAITVYAGDVDVLDQAVNYTQFYRN 598 Query: 349 ESCGWCTPCRDGLPWSVKI----LRALERGEGQPGDIETLEQLCRFLGPG---KTFCAHA 401 ESCG C PCR G V+I L++ G D+ +++ + + + C Sbjct: 599 ESCGKCVPCRLGSQKLVQIGEGLLKSRRAGRLPADDLAAIKKDVKEITKTLQLTSICGLG 658 Query: 402 PGAVEPLQSAIKYFREE 418 A PL +A++YF ++ Sbjct: 659 YVAPIPLATALEYFVDD 675 >UniRef50_B4K2N7 GH25296 n=4 Tax=Coelomata RepID=B4K2N7_DROGR Length = 833 Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 118/332 (35%), Positives = 183/332 (55%), Gaps = 15/332 (4%) Query: 15 WRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWS 74 WRL+ Q D YR+ + L + + IV++VK +GL+GRGG+G+ TG KW Sbjct: 142 WRLKGACQRG--DWYRTAD--------LLDMGANWIVDEVKRSGLRGRGGSGYYTGNKWE 191 Query: 75 LMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRG 134 + K + N + L+ N E EPGT KDR ++ PH ++EG L++ +A+ + I++R Sbjct: 192 FLQKVNANN-KILILNCAEGEPGTCKDREILRHEPHKIIEGCLLAGYAMGCEKCIIYVRN 250 Query: 135 EYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRR 194 + A NL+ A+AEA GLLG N TG F++ V G RY+ GEETAL+N L G+ Sbjct: 251 CFYNEACNLQFALAEAYRYGLLGCNACDTGIKFDIQVQRG-DRYLSGEETALVNCLMGKL 309 Query: 195 ANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSG 254 A PR +PP+ G + P V N ETL VP IL G +W+ + ++ + GTKL G Sbjct: 310 ARPRKRPPYLHEQGYFDHPCLVLNTETLAVVPTILRRGAKWFTGLGRNMNFGTKLFSICG 369 Query: 255 RVKNPGLWELPFGTTAREILEDYAGGMRDGL-KFKAWQPGGAGTDFLTEAHLD-LPMEFE 312 V++P E REI++ +AGG+ G PGG + + + + L M+++ Sbjct: 370 HVQHPCTVEEEMSMPLREIIDMHAGGVCGGWNNLLGVFPGGLSSPLIGKVGAEGLLMDYD 429 Query: 313 SIGKAGSRLGTALAMAVDHEIN-MVSLVRNLE 343 + KAGS GT + V + + ++ + R++E Sbjct: 430 CLQKAGSSFGTGGIIVVSNNCDPLLVMQRSIE 461 >UniRef50_Q67JR5 NADH dehydrogenase subunit n=1 Tax=Symbiobacterium thermophilum RepID=Q67JR5_SYMTH Length = 394 Score = 168 bits (426), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 129/353 (36%), Positives = 186/353 (52%), Gaps = 18/353 (5%) Query: 26 LDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFS--TGLKWSLMPKDESMN 83 L YR++ GY G A T S ++ QV AGL+GRGG+G G KW + + Sbjct: 16 LAAYRARGGYAGLEAARTRGS-GWVLEQVTRAGLRGRGGSGDGRPIGQKWQRVAASR-VP 73 Query: 84 IRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNL 143 RY++ NA E + + KDR L+ + PH ++EG+LI+A AL A Y+++RG+ EA Sbjct: 74 ERYVVANAAESQAVSRKDRYLLARFPHRVLEGLLIAAQALGAREAYLYVRGDSPEALDGA 133 Query: 144 RRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPF 203 R A+AEA AGLLG + V A + GEETA++++LEG P+ KPP Sbjct: 134 RDAVAEAGAAGLLG--------GVSVTVQPSAPTAVSGEETAILDALEGLEGYPQPKPPR 185 Query: 204 PATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWE 263 P G G+PT V N E+L V A+ GV+ + + GT L +G V PG++E Sbjct: 186 PEEIGLRGRPTLVQNAESLAAVAALFRLGVDRVRAVGTPTCPGTALFTVTGAVDRPGVYE 245 Query: 264 LPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLG- 322 +P GT ++L R+ + A PGG G+ L LD+P+ +E + GS LG Sbjct: 246 VPHGTPLAQLLALAGAPPRE--EILAVLPGGLGSGPLRPDELDVPLTYEDLAALGSSLGN 303 Query: 323 TALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGE 375 +A+ + + + LVR AR SCG C CR+G +LRALE G+ Sbjct: 304 SAVVVFRRADATLPDLVRENVALLARGSCGQCRGCREG---HEGLLRALEAGD 353 >UniRef50_C3JHP2 Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit n=1 Tax=Rhodococcus erythropolis SK121 RepID=C3JHP2_RHOER Length = 403 Score = 168 bits (425), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 118/377 (31%), Positives = 198/377 (52%), Gaps = 26/377 (6%) Query: 48 DEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQ 107 D +++ + +GL GRGGAGFS G+K + + + ++ N E EP + KD +L+ Sbjct: 32 DSVISAISRSGLAGRGGAGFSAGVKMAAITGRRPV----VIANGSEGEPLSSKDAVLLSD 87 Query: 108 LPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFD- 166 PHL+++G+ I+A A++A ++ + + E LR AI E +G+D Sbjct: 88 SPHLVLDGLSIAAAAVRATDAFLVVPASHTE---RLRNAITERRH----------SGWDR 134 Query: 167 FELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVP 226 ++ V AGR++ GE+TALI ++EG+ PRS + SG G+PT V+NVETL +V Sbjct: 135 TDVRVVASAGRFVSGEKTALIAAVEGKPPIPRSSLASSSKSGVKGRPTLVHNVETLAHVA 194 Query: 227 AILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLK 286 I GV+W+++ + + GT L+ SG V NPG+ E+P G+ ++ D G D Sbjct: 195 TIARFGVDWFRSSGTTSEPGTMLVTLSGAVNNPGVVEVPIGSRLEWVVGDI--GRADMDN 252 Query: 287 FKAWQPGGAGTDFLTEAHL-DLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEF 345 +A GG ++ A L + ES+ G+R G + A+ + + ++ ++ Sbjct: 253 TRAVLVGGYHGTWINRADLAGRRLSRESLAAIGARPGAGVVHALAVDTCGLRATADIVDY 312 Query: 346 FARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLG--PGKTFCAHAPG 403 ARES G C PC +GLP + L +PG+ +T+ ++ R+ G G+ C H G Sbjct: 313 LARESAGQCGPCLNGLPRLASVFGDL--AYHRPGE-QTIHEIRRYAGLVDGRGACHHPDG 369 Query: 404 AVEPLQSAIKYFREEFE 420 V ++SA+ F ++ Sbjct: 370 TVRLVRSALTAFADDVR 386 >UniRef50_Q51696 Putative uncharacterized protein ORF2 n=1 Tax=Brevundimonas diminuta RepID=Q51696_BREDI Length = 401 Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 124/389 (31%), Positives = 182/389 (46%), Gaps = 16/389 (4%) Query: 38 ARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPG 97 A + T + + + Q+ A L G+GGA F + K L ++ +YL+ N E EPG Sbjct: 27 AYRYATTIDAEAFLAQIDQAQLSGKGGANFPSARKMRLF-HQQAAPRKYLVVNGGEHEPG 85 Query: 98 TYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLG 157 + KD L+ P ++EG L A AL A +I AVN RA A Sbjct: 86 SAKDDWLLLHHPDTVIEGALCVAHALGA---------THILVAVNEGRAATVAAVREAAA 136 Query: 158 KNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVN 217 + + V Y+ GEETAL+ ++ G+ A P +PP+P SG G PT V+ Sbjct: 137 AIAIAGRLFPGIEVVLVPDEYVVGEETALLQAVAGQVAKPVRRPPYPIESGHQGMPTLVH 196 Query: 218 NVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDY 277 NVETL +VP +L G E Y+ + + G L F + G+ +P G +L Y Sbjct: 197 NVETLAHVPYLLLLGAEAYRGLG-APGQGVTLCTFGEEFVHAGVRLVPVGIDLNSLLYGY 255 Query: 278 AGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVS 337 GG++ G +A QPGG + FL D+ + S+ AGS LG A A ++V+ Sbjct: 256 GGGLKSGQAIRAVQPGGPASGFLPADRFDVAFDSASLRAAGSSLGCAAITAYAASDDLVA 315 Query: 338 LVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFL--GPGK 395 R FFA SC C CR + I+R LE G+ + TL+Q+ + GK Sbjct: 316 AARQRAAFFASASCEQCPQCRMQTQMLLAIVRQLESGK---ANARTLQQIPVIVKANAGK 372 Query: 396 TFCAHAPGAVEPLQSAIKYFREEFEAGIK 424 C V P+QS I YF+ + +A ++ Sbjct: 373 AICGLIDMPVAPIQSLIHYFKGDIDARMR 401 >UniRef50_A5X3H0 HtxX n=1 Tax=Xanthobacter flavus RepID=A5X3H0_XANFL Length = 496 Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 114/344 (33%), Positives = 164/344 (47%), Gaps = 16/344 (4%) Query: 28 EYRSKNGYEGARKALTGL-SPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRY 86 +YR+ GY R+ + + ++ Q+ GR G GF G KW + + Sbjct: 124 DYRAAGGYGQLRRVMADPGAAARMLAQLSAHQAVGRAGVGFPVGEKWRQVMAAGGTPV-- 181 Query: 87 LLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRA 146 ++ N DE E +KDR ++E PH ++E L++A A ++++R +Y +RRA Sbjct: 182 VIVNGDEGELAIFKDRFILETDPHGVLEAALVAARVTGADLVFLYVRDDYAPIHAIVRRA 241 Query: 147 IAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPAT 206 + E AGL G EL GA +ICGEETALI SLEGR A P +PPFP T Sbjct: 242 LEEVAAAGL------AEGIGLELRRSGGA--FICGEETALIASLEGRAARPTERPPFPTT 293 Query: 207 SGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPF 266 G G+PT ++NVET + A A G S D +L SGRV PG + Sbjct: 294 RGYLGRPTLLHNVETFYRLTA--AWGGTPGSPASVLLDPQVRLFSVSGRVCAPGPKPV-R 350 Query: 267 GTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALA 326 G + L + AGGM++G GG+ + A P+ + G RLGT A Sbjct: 351 GLSRLADLVEIAGGMQNGHALGGLVIGGSSGTLVGAADCRRPL--ADLLAEGLRLGTGGA 408 Query: 327 MAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRA 370 + + ++ + + ARESCG C PCR G + +IL A Sbjct: 409 IVFGADDEPRAIAARMAAYLARESCGQCGPCRIGTAHAARILAA 452 >UniRef50_B9BGV0 NAD-dependent formate dehydrogenase beta subunit (Fragment) n=1 Tax=Burkholderia multivorans CGD1 RepID=B9BGV0_9BURK Length = 281 Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 72/178 (40%), Positives = 101/178 (56%) Query: 178 YICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQ 237 Y+CGEETAL+ SLEG+R R+KPP PA +G +G+PT +NNV TL P I A G +Y+ Sbjct: 104 YVCGEETALLESLEGKRGVVRAKPPLPALAGLFGQPTVINNVITLATAPVIFARGAAFYR 163 Query: 238 NISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGT 297 + + GT +G ++ GL EL FG T RE+L D+ GG G +A Q GG Sbjct: 164 DYGMGRSRGTLPFQLAGNIRYGGLVELAFGVTLRELLFDFGGGTATGRPARAAQVGGPLG 223 Query: 298 DFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCT 355 +L E D+P+++E+ G+ +G + D N+ L +F A ESCG CT Sbjct: 224 TYLPEHQWDVPLDYEAYTAIGAVVGHGGIVLHDDTSNLAELAEYAMKFCAIESCGKCT 281 >UniRef50_UPI0001A42CCF NADH dehydrogenase I subunit F n=2 Tax=Enterobacteriaceae RepID=UPI0001A42CCF Length = 85 Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 66/77 (85%), Positives = 68/77 (88%), Gaps = 1/77 (1%) Query: 370 ALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGI-KQPFS 428 +LE+GEGQPGDIETLEQLCRFLGPG TFCAHAPGAVEPLQSAIKYFREEFEAGI KQ Sbjct: 9 SLEKGEGQPGDIETLEQLCRFLGPGNTFCAHAPGAVEPLQSAIKYFREEFEAGISKQYLG 68 Query: 429 NTHLINGIQPNLLKERW 445 N I GIQPNLLKERW Sbjct: 69 NVKAIGGIQPNLLKERW 85 >UniRef50_O96948 Hydrogenase (Fragment) n=72 Tax=root RepID=O96948_NYCOV Length = 1206 Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 115/405 (28%), Positives = 177/405 (43%), Gaps = 38/405 (9%) Query: 36 EGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEME 95 E +KA++ + P++++ +V + L GRGGAGF TG KW K + + +Y++CNADE Sbjct: 830 EATKKAVS-MGPEKVIEEVFKSNLVGRGGAGFRTGKKWESAYKTPASD-KYVVCNADEGL 887 Query: 96 PGTYKDRLLM--EQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEA 153 P TYKD L+ E + GM I A + A R +++LR EY R + A E Sbjct: 888 PSTYKDWCLLNNEAKRKEVFTGMGICAKTIGAKRCFMYLRYEY--------RNLVPALEQ 939 Query: 154 GLLGKNIMGTG---FDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPP---FPATS 207 + K++ T D + + G G Y+ GEE A S+EGR PR P FP Sbjct: 940 SI--KDVQSTCPELADLKYEIRLGGGPYVAGEENAQFESIEGRAPLPRKDRPGNIFPTME 997 Query: 208 GAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFG 267 G + KPT +NNVET +P I+ G + + + KL+ +G V P L E Sbjct: 998 GLFHKPTVINNVETFFAIPHIIQQGSQSF-----GEGKMPKLLSVTGDVDEPILIETNLN 1052 Query: 268 T-TAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALA 326 + +L++ + A + GG + + D F G+ G+ Sbjct: 1053 NYSLNHLLQEISAK-----DIVAAEIGGCTEPIIFGSKFDTLFGF---GR-GTLNAVGSV 1103 Query: 327 MAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQ 386 + + ++ + N +F A ESC C PCRDG + + L R G+ Sbjct: 1104 VLFNSSCDLGKIYENKLKFMAEESCKQCVPCRDGSYIFHRAFKEL-RDTGKSSYNMRALA 1162 Query: 387 LCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTH 431 + + CAH +SA + + I QP S H Sbjct: 1163 VASESAARSSICAHGKALESLFKSACDFMNK--TKPIYQPHSTYH 1205 >UniRef50_C1IC09 Respiratory-chain NADH dehydrogenase n=2 Tax=Streptomyces RepID=C1IC09_STRCI Length = 497 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 101/358 (28%), Positives = 157/358 (43%), Gaps = 21/358 (5%) Query: 49 EIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQL 108 +V+ V+ AGL GRGGAGF T K + + ++ NA E EP + KD+ L+ Sbjct: 112 SLVDAVEAAGLTGRGGAGFPTARKMRSVAAGRGRPV--VVVNAMESEPASRKDQFLIAVA 169 Query: 109 PHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFE 168 PHL+++G +++A + A ++ L L A+ E A L Sbjct: 170 PHLVLDGAVLAAVQVGADTVHVCLPRTRTAQQRRLGNAVEERRSARL---------DPVR 220 Query: 169 LFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAI 228 + +H Y+ E T+L+ L+G A PR PP G +PT V+N ETL ++ I Sbjct: 221 IRLHALPHGYVSSESTSLVRWLDGGPARPRGNPPHSHERGVARRPTLVHNAETLAHLALI 280 Query: 229 LANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLK-F 287 +G +W++ + GT ++ SG V PG+ E+P G L+ G D + Sbjct: 281 ARHGPDWFRRAGTPDEPGTMMITVSGAVTAPGVGEVPLGIP----LDTALGRAGDTTEPV 336 Query: 288 KAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFA 347 +A GG +L L P+ + G+ G + +A+ + + F Sbjct: 337 RALLVGGFAGTWLPAEDLHTPLTRRDLAPLGAAPGAGVLIALPRSACGLLETARILAFLG 396 Query: 348 RESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLG--PGKTFCAHAPG 403 +S C PCR GLP + AL G+ P E L +L R G P + C H G Sbjct: 397 AQSARQCGPCRYGLPAVAEDFAALAAGQSHP---ELLSRLRRRTGLLPDRGACRHPDG 451 >UniRef50_B2HFH1 NADH dehydrogenase I (Chain F) (NADH-ubiquinone oxidoreductase chain F), NuoF_1 n=12 Tax=Mycobacterium RepID=B2HFH1_MYCMM Length = 445 Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 104/363 (28%), Positives = 173/363 (47%), Gaps = 27/363 (7%) Query: 29 YRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNI---- 84 YR++ GY A D+++ ++ +GL GRGGA F +K + +D Sbjct: 39 YRAQGGYRPLGDA------DKLLREIDASGLLGRGGAAFPLAVKMRAV-RDNCRRAGPAG 91 Query: 85 -RYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNL 143 ++ N +E EP ++KDR L+ PHL+++G+ ++A + A R Y+++ E+A ++ Sbjct: 92 GAVVIANGEEGEPASFKDRWLLRNRPHLVLDGLRLAAALVAATRAYVYVSDP--ESARSV 149 Query: 144 RRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPF 203 RA+ + L + G V G Y+ GEETA + ++ G P KPP Sbjct: 150 ERALTQ------LDPDAFGGVAVSVWAVPPG---YVAGEETAAVRAINGGPVKPSDKPPR 200 Query: 204 PATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWE 263 P G G+PT V+NVETL N+P + +G Y+ + GT L +G + P L+E Sbjct: 201 PFEYGVSGRPTLVSNVETLANLPYLHRHGASEYRALGTPSSPGTFLATITGAGRAPVLYE 260 Query: 264 LPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGT 323 LP+G E+L +A K + GG L L ++ E++ + GS LG Sbjct: 261 LPYGLPFSELLALHAVAP---TKIRGVLMGGYFAGLLNRGVLGTTLDHETMRRLGSGLGC 317 Query: 324 ALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIET 383 A++V + V++ ++ +F RE+ G C C +G + AL DI+ Sbjct: 318 G-AISVITDDCPVAVAASVLSYFDRENAGQCGSCFNGTAAMAAVGGALRDFAATSEDIDR 376 Query: 384 LEQ 386 L + Sbjct: 377 LRR 379 >UniRef50_Q2J9U3 Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit n=3 Tax=Frankia RepID=Q2J9U3_FRASC Length = 510 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 106/425 (24%), Positives = 176/425 (41%), Gaps = 71/425 (16%) Query: 47 PDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMN----------------------- 83 P ++ ++ D+GL GRGGA F T K + + ++ Sbjct: 94 PGRLLPEIHDSGLTGRGGAAFPTWRKLAASAEGTCLDGSHSGSAHRGSTHRGSQHRNAGH 153 Query: 84 --IRY-------LLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLR- 133 RY ++ NA E EP + KD L+ PHL+++G+ ++A A+ A +++L+ Sbjct: 154 RADRYRSSAHPVVVANAAEGEPESAKDVTLLTVAPHLVLDGLQLAAEAVGADDAFVYLKP 213 Query: 134 GEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFD-FELFVHTGAGRYICGEETALINSLEG 192 G + T G+D F + + ++ GE +A+I +LEG Sbjct: 214 GPAV-------------TAVRRALAQRRAAGWDRFTVQIREAPETFVAGEASAVIAALEG 260 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGF 252 A PR+ A +G G+PT V N ETL ++ I G W++++ +++ GT L Sbjct: 261 GAARPRAHWQPLAEAGFHGRPTLVQNAETLAHLALIARWGASWFRSVGTAEEPGTFLATV 320 Query: 253 SGRVKNPGLWELPFGTTAREILE------DYAGGMRDGLKFKAWQPGGAGTDFLTEAHLD 306 +G V PG+ E+PFGT + + + G R G AW PGG G Sbjct: 321 TGAVAAPGVVEVPFGTPLGTLAQLAGGFTEQVGAFRVGGYSGAWLPGGPGA--------T 372 Query: 307 LPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVK 366 + M ++ G+ GT + + + + + A ++ G C PC GLP Sbjct: 373 IAMSRAALAPWGAAPGTGVVAVLPARGCGLVETARIVGYLAAQNAGQCGPCVSGLPQLAD 432 Query: 367 ILRALER----------GEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFR 416 + + R G G PG L G+ C H GA + SA++ F Sbjct: 433 AVAGMARTDGGSGGPVQGAGDPGQSAIRALRLAALVAGRGACHHPDGAARLVHSALRTFV 492 Query: 417 EEFEA 421 ++ A Sbjct: 493 DDIRA 497 >UniRef50_B1CC51 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CC51_9FIRM Length = 357 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 98/399 (24%), Positives = 170/399 (42%), Gaps = 70/399 (17%) Query: 22 QPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDES 81 P+ LD+Y + GYE + K + + ++++ +KDA L R +WS Sbjct: 25 NPICLDDYVAFGGYEASSKVVN--NEVDVISILKDANLVARKKLNELCADRWS------- 75 Query: 82 MNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAV 141 ++C ++ P D + + PH++VE M+I A +G I + E A Sbjct: 76 -GAETVVCETED--PMATLDLKVQTEAPHVIVEAMIIFMHVNNAKKGVIVVNDEL--AYN 130 Query: 142 NLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKP 201 L +A+ +A AGL K+I+ + S++G + N + Sbjct: 131 RLNKAVTDAKNAGLNDKDIIVSKV-----------------------SIDGLKENAQ--- 164 Query: 202 PFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDA-GTKLMGFSGRVKNPG 260 +LAN V QN K A G K + G+VKNPG Sbjct: 165 --------------------------LLANVVAIVQNSYKPAPAKGLKGVAIGGKVKNPG 198 Query: 261 LWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSR 320 ++E+ GTT R+++E+ AGG K KA + G ++L+ LD + F S+ G Sbjct: 199 VYEIEDGTTYRKLIEEIAGGATG--KVKAIKVGAPYGEYLSSDILDEKINFMSLMMNGMV 256 Query: 321 LGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGD 380 GTAL + +D +M + + F SCG C PC+ G ++++ + +G + Sbjct: 257 RGTALIVVLDESTDMAKEISDYLGFLLNVSCGKCFPCKVGTKRMDEMVKEVVKGNATKEN 316 Query: 381 IETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEF 419 ++ + + G T C P+ +A++ FR++F Sbjct: 317 YNMIKSIAVNMNIG-TLCPIGQKGAVPVLTALENFRDDF 354 >UniRef50_C7LYX8 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LYX8_ACIFD Length = 408 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 118/419 (28%), Positives = 181/419 (43%), Gaps = 58/419 (13%) Query: 20 DKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKD 79 D P+ LD +R+ G R L + + IV GRGGAGF K + + Sbjct: 29 DAPPLSLDAHRAIYGSLPPRPPLA--TAEHIV---------GRGGAGFPLARKLAAVASQ 77 Query: 80 ESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEA 139 R ++ N E EPG KD+ L+ PHL+++G+ ++ L+A + + E A Sbjct: 78 R--GPRVVVANGAESEPGARKDKALLTHAPHLVLDGLGLATRLLEAREAIVAV--EDATA 133 Query: 140 AVNLRRAIAEATEA---GLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRAN 196 A L RAI E ++A LL ++ Y+ G+ETAL+ +LEGR A Sbjct: 134 ADVLERAIRERSDAVRVALLDRS------------------YLTGQETALLAALEGRPAL 175 Query: 197 PRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNI-SKSKDAGTKLMGFSGR 255 PR + A G +PT V NVETL G W+Q+ ++ D T+++ + Sbjct: 176 PRFQLARVAERGYKSRPTLVANVETLAQWALAARFGTSWHQSAGTRGHDRSTRIVSIALP 235 Query: 256 VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIG 315 P + EL G T R +L+ A G+ GL GG + ++ A + M + Sbjct: 236 GSTPTVVELAPGATVRSLLD--AVGVTTGLALV----GGLFGELISVAD-ERAMARVLVD 288 Query: 316 KAGSR----LGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRAL 371 +A S LG + +V L + + E G C PC GLP ++ RAL Sbjct: 289 RADSSDELALGAGSVLLAPSATCVVCATSELVGYLSEERAGQCGPCDRGLP---ELARAL 345 Query: 372 ERGEGQPGDIETLEQLCRFLGPGK--TFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFS 428 G +P ++ T+ +L G AH A+ P +A R E +PF+ Sbjct: 346 GAG-ARPAELATVARLIARRGACALPDAAAHLATAITPADAAGHQRRRCHE----RPFA 399 >UniRef50_Q18DS5 NAD-reducing hydrogenase, alpha subunit n=1 Tax=Haloquadratum walsbyi DSM 16790 RepID=Q18DS5_HALWD Length = 502 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 105/405 (25%), Positives = 173/405 (42%), Gaps = 46/405 (11%) Query: 21 KQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDE 80 ++P +D+Y + G+ L + PD + + + +G G A + L + M D+ Sbjct: 122 RRPANVDDYDAAGGF------LKDIDPDAVFDAGESIHGRGWGDACHDSPLTKTWMDADD 175 Query: 81 SMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAA 140 + ++ NA PG D LL+ +P +++G + A + A IF A+ Sbjct: 176 AEGEAAIVINA-HSNPG---DSLLLSSVPFTILDGAVSLAQTVDASEIVIF-------AS 224 Query: 141 VNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG-RRANPRS 199 + I A A N D TG Y E T + ++EG R R Sbjct: 225 IADESTIETARTAIDRYPNESSIAIDLV----TGPAEYRAAEPTMALEAIEGNHRLEARL 280 Query: 200 KPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNP 259 +PP P + G +G+PT ++ TL ++ L + S T++M G V + Sbjct: 281 RPPGPESVGLYGRPTLIHTARTLAHLAVSL-------REDSIDSHPSTRIMSIEGDVTDR 333 Query: 260 GLWELPFGTTAREILEDYAGGMRDGLKFKAW--QPGGAGTDFLTEAHLDLPMEFESIGKA 317 + E+P TT + A DG+K + GG D LD+ ++ E++ A Sbjct: 334 TIIEVPETTTLETVC--AAADTTDGIKAACVGGRFGGLAAD------LDISVDPETLIDA 385 Query: 318 GSRLGT-ALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEG 376 LGT + + + +V V +F A E+CG C PCR+G ++LR+L G Sbjct: 386 --NLGTEGIVHVLSEDRCVVEFVGERAQFAAEENCGRCVPCREGTTQLAELLRSLYDGTY 443 Query: 377 QPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEA 421 QP E +++L R + + C A P Q+A+ F EFEA Sbjct: 444 QP---EAIDELIRVM-TTTSICEFGVNAGRPTQTALNAFESEFEA 484 >UniRef50_A6LZW7 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LZW7_CLOB8 Length = 414 Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 60/183 (32%), Positives = 93/183 (50%), Gaps = 1/183 (0%) Query: 248 KLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDL 307 K++ +G VKN G++E+PFGT+ REI+ +Y GG K Q GG TE LD Sbjct: 134 KIISIAGDVKNSGIYEIPFGTSLREIISEYGGGTESEKAIKFVQVGGNTGAVFTEEELDT 193 Query: 308 PMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKI 367 P + ++ G+ L + + ++ +V+ V ++E+CG C CR+G+ KI Sbjct: 194 PFLYSNLIGNGTMLEVSKIEVYNVDMCVVNWVTQKMLDNSKETCGKCVYCREGIYQLYKI 253 Query: 368 LRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPF 427 ++ G+G+ DI QL + G T C A PL +AI FR+EFE I + Sbjct: 254 IKDATEGKGKESDINLALQLSETIKIG-TLCDFGRTASNPLYTAINKFRDEFEKHIDRKI 312 Query: 428 SNT 430 +T Sbjct: 313 CST 315 >UniRef50_C7Q9V1 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q9V1_CATAD Length = 418 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 91/247 (36%), Positives = 128/247 (51%), Gaps = 42/247 (17%) Query: 27 DEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRY 86 D Y GY LSPD +VN++K AGL+GRGGAGF K L+ + ++ Sbjct: 26 DAYWHAGGYRD-------LSPDLLVNRIKAAGLRGRGGAGFPAAAK--LLAVRAAGSVPV 76 Query: 87 LLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRA 146 ++ N E EPG+ KDR LM PHL+++GML +A +A R Y+++ + EAA ++RRA Sbjct: 77 VVANGGEGEPGSVKDRWLMRARPHLVLDGMLRAADITRAARCYVYVADD--EAAESMRRA 134 Query: 147 IAEATEAGLLGKNIMGTGFDFELFVHTGAGR----YICGEETALINSLEGRRANPRSKPP 202 +AE E +V T R Y+ GEETA++ + G A P +KPP Sbjct: 135 LAE-----------------REPYVPTQIVRVAHTYVAGEETAVVRRINGGPALPTAKPP 177 Query: 203 FPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLW 262 P SG G PT V NVETL + A+LA ++ + + L+ SG P L Sbjct: 178 RPFESGVDGVPTLVANVETLARI-ALLA---------ARPQTPDSLLLTVSGPGLEPELV 227 Query: 263 ELPFGTT 269 E P GT+ Sbjct: 228 EAPVGTS 234 >UniRef50_A1SNE6 Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit n=1 Tax=Nocardioides sp. JS614 RepID=A1SNE6_NOCSJ Length = 412 Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 94/363 (25%), Positives = 159/363 (43%), Gaps = 34/363 (9%) Query: 61 GRGGAGFSTGLKWSLMPKDESMNIR--YLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLI 118 GRGGA F +K D S R ++ N E EP + KD L PHL+++G + Sbjct: 59 GRGGAAFPFEVKLRTA-ADRSRQGRRPVVVVNLSEGEPASAKDSALALTRPHLVLDGAVA 117 Query: 119 SAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRY 178 +A+AL A ++ + E +R A+AE + +HT GR+ Sbjct: 118 TAYALGARELHVVVPQERPLVGTAIRAALAERRD-------------RLRTHLHTAQGRF 164 Query: 179 ICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQN 238 + G+ A++ + GR P + A +G G+PT ++N ET V ++ G E Y Sbjct: 165 VAGQARAVLELMAGRPNLPVTAWSPEAVAGHRGRPTLLSNAETWAQVGRLVLAGEERYAA 224 Query: 239 ISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREIL-EDYAG-GMRDGLKFKAWQPGGAG 296 + + + GT L+ S + E+ G+ R++L E +AG + G AW P Sbjct: 225 LGSADEPGTTLLTLSAATST--VVEVELGSPWRDVLPEAWAGRSLLVGGFHGAWVPWAT- 281 Query: 297 TDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTP 356 L + + +++ A + LG + +A V+ + ++ A +S C P Sbjct: 282 ---LVAGRVSV----DAMRAAETPLGAGVVVA--PRGCPVAFTARVVDYLAAQSARRCGP 332 Query: 357 CRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFR 416 C +GLP + ++ + G G P +E L L G+ CAH G ++S + F Sbjct: 333 CLNGLPALARAVQEVVDGAGHPERVEGLAALVT----GRGACAHPDGTARLVRSMLATFP 388 Query: 417 EEF 419 +E Sbjct: 389 DEV 391 >UniRef50_UPI0001B56646 respiratory-chain NADH dehydrogenase domain-containing protein n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B56646 Length = 347 Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 100/337 (29%), Positives = 145/337 (43%), Gaps = 44/337 (13%) Query: 87 LLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRA 146 ++ N E +P + KDR L+E PHL+++G+ ++A A+ A Y+ LR E ++ A Sbjct: 39 VVANGCESDPFSSKDRALLELAPHLVLDGIQVAAHAVGATEAYLCLR----EGNRSVLAA 94 Query: 147 IAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPAT 206 +AE +A + + RY+ EETAL++ L A P K P P Sbjct: 95 LAERRDAVPVKVVAV-------------PHRYVASEETALVHFLGSGDARPTGKFPRPTE 141 Query: 207 SGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPF 266 G G+PT V NVETL + G + + T L+ +G V PG+ E+P Sbjct: 142 RGLRGRPTLVQNVETLARFALVARTGADRFVP--------TDLVTVTGAVARPGVMEVPA 193 Query: 267 GTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLD-LPMEFESIGKAGSRLG-TA 324 T IL AGG + +A GG G ++ + D LP+ G G ++ Sbjct: 194 DTPVSAILA-RAGG---SVTAQAVLIGGYGGTWMPRSLADPLPL--------GREPGLSS 241 Query: 325 LAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETL 384 L + D V L RN+ A ES C PC GLP L G G + Sbjct: 242 LHLLPDSHCG-VELTRNILHTLAGESARQCGPCMFGLPAVAADFTDLLSGRDATGRLARR 300 Query: 385 EQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEA 421 L G+ CAH GAV SA++ F + A Sbjct: 301 LPLLS----GRGACAHPDGAVRLAASALRVFAADVHA 333 >UniRef50_D2RYM8 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RYM8_9EURY Length = 565 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 119/435 (27%), Positives = 177/435 (40%), Gaps = 47/435 (10%) Query: 7 TPETHPLTW-RLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGA 65 TPE PL+ R R + W+D + E A + L G PDE +++V+D GL GRG Sbjct: 131 TPEDGPLSVGRRRVLGRCGWVDPASVPD--ESAAE-LAGDDPDEALSRVRDVGLLGRGRG 187 Query: 66 GFST----GLKWSLMPK---------DESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLL 112 +S +W L + D + ++ N +E + DR L+E P + Sbjct: 188 DWSVDDPVAEEWELAREAAAEGADEGDSEADEPVVVVNGNESDDRNATDRTLLEAAPGEV 247 Query: 113 VEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFEL--F 170 ++G L A + A ++ N RA EA + D E Sbjct: 248 LDGALAVAELVGADDVVVYCN-------ENDDRARERVHEAARNAEERFAERLDRESGPE 300 Query: 171 VHTGAGRYICGEETALINSLEGR-RANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAIL 229 V G RYI GE T + ++EG R R +PP PA G +G+PT V+ T+ V L Sbjct: 301 VVVGPDRYIAGEPTMALEAMEGNDRLEARLRPPSPAEHGLYGRPTIVHTPRTMAQVRRAL 360 Query: 230 ANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILE--DYAGGMRDGLKF 287 E+ + D GT+L +G V ELP G + ++ E D G +F Sbjct: 361 LAPDEFDAD---DADPGTRLFTVTGDVDAAATVELPTGGSLADVRETVDLEG------RF 411 Query: 288 KAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFA 347 K GG F L + G+ LGT + + +E N V FA Sbjct: 412 KMACVGGQFGGFTRS----LSQSPSAPALEGAELGTEGVVELLNEDNCVLATAGRRANFA 467 Query: 348 -RESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVE 406 E+CG C CR+G +LR + G+ Q I +L R +G + C A+ Sbjct: 468 MEENCGRCVTCREGSQELTNMLRDIYDGQYQDAKI---RELTRVMGE-TSICQFGRTAIR 523 Query: 407 PLQSAIKYFREEFEA 421 P + ++ F E A Sbjct: 524 PAVTGMREFEREVAA 538 >UniRef50_B4V5Q7 Oxidoreductase n=1 Tax=Streptomyces sp. Mg1 RepID=B4V5Q7_9ACTO Length = 481 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 100/395 (25%), Positives = 166/395 (42%), Gaps = 37/395 (9%) Query: 32 KNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKW-SLMPKDESMNIRY-LLC 89 + G+ AL D++++ + L+GRGGAGF K ++M + R ++ Sbjct: 29 RVGHLTVHGALPQYRVDDLIDLAEAIDLRGRGGAGFPFHRKLRAVMRSARAKEGRSAVVV 88 Query: 90 NADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAE 149 NA E EP KD L+ +PH++++G ++A AL A + + + +E +V R AIAE Sbjct: 89 NASEGEPSCLKDTALLLHVPHVVLDGAQLAADALGAEDVVVGVTRDDVERSV--RDAIAE 146 Query: 150 ATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGA 209 G L V R++ GE T++IN +EG A P + + G Sbjct: 147 -------------RGPGTRLRVSRLPERFVTGEGTSMINGIEGNPAVPNGQKVRTSERGL 193 Query: 210 WGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTT 269 G PT ++N ET + G Y ++ + GT ++ SG E+P GT+ Sbjct: 194 TGLPTLLSNTETYAQLAIAARLGAAGYNSVGLPAEPGTLMLTVSGATA----VEIPSGTS 249 Query: 270 AREILEDYAGGMRDGLKFKAWQ-----PGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTA 324 +LE G+ + P A L+ L F+++ LG Sbjct: 250 LAYVLELCGSSPGQGVLVGGYHGRWLTPEDASQALLSRQSL---AAFDAV------LGAG 300 Query: 325 LAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETL 384 + + + V + + A E+ G C PC GLP + + G G+ E + Sbjct: 301 AVLPLPEDTCPAGEVARVTRWMADETAGQCGPCVRGLPSLATAVEQMVAGGGR-ATFEAV 359 Query: 385 EQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEF 419 E R + G+ C+H G + SA+ F +E Sbjct: 360 EARMRAV-RGRGACSHPDGTSGFVASALNVFADEL 393 >UniRef50_A1SQ39 Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit n=1 Tax=Nocardioides sp. JS614 RepID=A1SQ39_NOCSJ Length = 412 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 99/382 (25%), Positives = 150/382 (39%), Gaps = 48/382 (12%) Query: 61 GRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISA 120 GRGGA F K +P + L N E EP + KDR LM PHL+++G L A Sbjct: 52 GRGGAAFPVATKLLAVPTGSRTQV---LVNGSESEPASRKDRTLMTLTPHLVLDGALAVA 108 Query: 121 FALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYIC 180 AL R ++ AV+ A+A A L + + + AGR++ Sbjct: 109 RAL---------RTRHVTIAVHDAAALASLRTA--LDERARDEPIHERVDLRRTAGRFVS 157 Query: 181 GEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNIS 240 GE AL+ L+G A P S+ P+ SG G PT +NVET V +++ G + + Sbjct: 158 GEVRALLRGLDGGPAVPPSRRTLPSDSGLRGAPTFASNVETFAQVALLVSLGATEFGAVG 217 Query: 241 KSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFL 300 ++ GT L+ G + G+ E+P L A PG G + Sbjct: 218 NPEEPGTTLLTLLGDTRTQGVVEVP-----------------TDLPLDALLPGAGGPVLV 260 Query: 301 TEAH------LD-LPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGW 353 H +D L + AG L + + E+ ++ V + + A +S G Sbjct: 261 GGYHGRWVRDVDGLAAARPGLRAAGLPLNAGVVARLPREVCALAEVTAVTRWLAAQSAGQ 320 Query: 354 CTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIK 413 C PC G + L G P L L G+ CAH G + +A+ Sbjct: 321 CGPCLYGTAALAHDVGELLHGRAAPAVEARLRGLV-----GRGACAHPDGTTAFVSTALA 375 Query: 414 YFREEFE-----AGIKQPFSNT 430 +E E G +P++ Sbjct: 376 TLGDELELHRQHGGCGRPYAGV 397 >UniRef50_C4RMV1 Oxidoreductase (Fragment) n=6 Tax=Actinomycetales RepID=C4RMV1_9ACTO Length = 382 Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 92/366 (25%), Positives = 153/366 (41%), Gaps = 34/366 (9%) Query: 45 LSPDEIVNQVKDAGLKGRGGAGF--STGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDR 102 + P ++ + LKG+GGAGF + L+ L + ++ NA E EP ++KD+ Sbjct: 41 MEPANLLRLAEAIQLKGKGGAGFPFARKLRAVLESCERQDASAIVVVNATEGEPASWKDK 100 Query: 103 LLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMG 162 +L+ + PHL+++G + A+AL A I + + + R ++ EA + + Sbjct: 101 VLLARAPHLILDGAALVAYALDADEIVIGVADDDVG-----RPSLTEALQERRM------ 149 Query: 163 TGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETL 222 + T R+I GE AL+N + G P + SG G PT ++N ET Sbjct: 150 ---PVPTSMVTVPDRFISGEGGALVNGINGLPHIPPGTKKRSSDSGVNGLPTLLSNAETY 206 Query: 223 CNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILE-----DY 277 + G Y + + GT L+ +G K P + E GT R+ILE D Sbjct: 207 AQLAVAARLGPYEYAALGTDDEPGTLLLTVTGAAKRPAVVECAAGTPLRDILELCEVPDG 266 Query: 278 AGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVS 337 G + G K W EA + + + G LG + + + + + Sbjct: 267 PGVLMGGYHGK-W--------ITAEAAQRAEVSRKGLTAVGGTLGAGIIVPLGRDTCPLG 317 Query: 338 LVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTF 397 + + A ES G C PC+ GLP + RA++ IE + + G+ Sbjct: 318 EAAQVVRYLAGESAGQCGPCKMGLP---DLARAVDLAVSGSAPIEIVRAAAGDV-KGRGA 373 Query: 398 CAHAPG 403 C+H G Sbjct: 374 CSHPDG 379 >UniRef50_D1A5I5 NADH dehydrogenase (Quinone) n=2 Tax=Actinomycetales RepID=D1A5I5_THECD Length = 505 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 106/423 (25%), Positives = 175/423 (41%), Gaps = 66/423 (15%) Query: 24 VWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWS--------- 74 + LD +R+ +G AL + +E++ + ++GRGGA F K Sbjct: 24 IDLDRHRALHG------ALAVPTLEELLKITEAVDIRGRGGAAFPFARKLMAVAKQVGRP 77 Query: 75 ------LMPKDES------MNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFA 122 L+P +E ++ N E EPG+ KD++L+ + PHL+++G I+A A Sbjct: 78 GDVDDFLLPGEEDDHRGRRQKRAVVVVNGSEGEPGSKKDKVLLTRNPHLVLDGAQIAATA 137 Query: 123 LKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGE 182 L I + E AA ++R AI E V R+I GE Sbjct: 138 LGTRDIVIAIEDET--AARSMRAAIVERR---------------MPAEVVRLPERFISGE 180 Query: 183 ETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKS 242 A+I ++ G P + A SG G+PT ++N ET + +++ G + Y ++ Sbjct: 181 SGAVIRAINGETPIPPGRKVRAAESGVDGRPTLLSNTETFAQLAVLVSLGPDLYASVGTD 240 Query: 243 KDAGTKLMGFSGRVKNPGLWELPFGTTAREI-----LEDYAGGMRDGLKFKAWQPGGAGT 297 + GT L+ G E P GT + ++ G + G + P A T Sbjct: 241 SEPGTTLLTVGGTTVV----ECPLGTPLASVFAQCGVQPGQGVLVGGYHGEWITPEAART 296 Query: 298 DFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPC 357 ++ A F+++G + LG + + + + V + + A +S G C PC Sbjct: 297 AIVSRAG------FQAVGGS---LGAGIILPLPEGTCPLREVARIASYMAGQSAGQCGPC 347 Query: 358 RDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFRE 417 R GLP + L AL G G P L + +G G+ C+H G SA+ F Sbjct: 348 RLGLPDLYRSLEALVDGSGSP----ELVRRAAGIGRGRGACSHPDGTARFALSALNTFAR 403 Query: 418 EFE 420 + E Sbjct: 404 DIE 406 >UniRef50_B2CIR6 NADH:ubiquinone oxidoreductase NADH-binding 51kD subunit (Fragment) n=1 Tax=Aphanomyces astaci RepID=B2CIR6_9STRA Length = 172 Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 51/139 (36%), Positives = 73/139 (52%), Gaps = 3/139 (2%) Query: 292 PGGAGTDFLTEAHL-DLPMEFESI-GKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARE 349 PGG+ + EA ++ M+F+ + GS LGTA D ++MV +R L F+ E Sbjct: 1 PGGSSVPVMDEATCQNIHMDFDDLKNTGGSGLGTAAVTIFDKSVDMVGAIRRLSHFYTHE 60 Query: 350 SCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQ 409 SCG CTPCR+G W IL +E G + +I LE++ R + G T CA A P+Q Sbjct: 61 SCGQCTPCREGTGWMESILTRMETGNAELEEIPMLEEISRQI-EGHTICALGDAAAWPVQ 119 Query: 410 SAIKYFREEFEAGIKQPFS 428 IK F+ + I+ P S Sbjct: 120 GLIKRFKHKLVERIENPAS 138 >UniRef50_B5HXD6 Oxidoreductase n=2 Tax=Streptomyces RepID=B5HXD6_9ACTO Length = 505 Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 100/374 (26%), Positives = 161/374 (43%), Gaps = 30/374 (8%) Query: 59 LKGRGGAGFSTGLKW-SLMPKDESMNIR-YLLCNADEMEPGTYKDRLLMEQLPHLLVEGM 116 LKGRGGAGF K S+ +R ++ N E EP KD +L+ + PHL+++G Sbjct: 26 LKGRGGAGFPFHKKLRSVAEAAIKRGVRPVVVVNGSEDEPACRKDTVLINRAPHLILDGA 85 Query: 117 LISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIM-GTGFDFELFVHTGA 175 L++A AL A I + R + + EA L + + G V Sbjct: 86 LLAAEALGARTLVIGV----------TRESTQRSMEAALAERGLSNGRRSALRARVQRNP 135 Query: 176 GRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEW 235 R + G +LI S++G A P + + +G G PT ++N ET + G E Sbjct: 136 VRMVTGAAASLIRSIDGGPAIPPGRKVSASQNGVGGAPTLLSNAETFAQLAIAARIGPER 195 Query: 236 YQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAG------GMRDGLKFKA 289 Y N + GT ++ SG V P + E+P G R +L+ AG G+ G Sbjct: 196 YGNTGLYDEPGTVMLTVSGAVARPMVIEVPTGVPLRYVLQ-LAGAPPVPQGVLTGGYHGK 254 Query: 290 WQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARE 349 W + + + S+ G LG + + E + + ++ A E Sbjct: 255 WIDAATVNEAIVSRN--------SLDAVGGALGAGAILPITQETCPLGESLRVAQWLAEE 306 Query: 350 SCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQ 409 S G C PC GLP + + + + G G P +E L+Q+ + + + C+H G+ L+ Sbjct: 307 SAGQCGPCYLGLPAAARGMEDILNG-GGPAALEALKQVAKNV-KRRGACSHPDGSAMFLE 364 Query: 410 SAIKYFREEFEAGI 423 S IK F ++ A + Sbjct: 365 STIKAFTDDLAAHV 378 >UniRef50_C8XFQ0 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XFQ0_NAKMY Length = 426 Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 71/236 (30%), Positives = 111/236 (47%), Gaps = 16/236 (6%) Query: 41 ALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIR--YLLCNADEMEPGT 98 AL S E+ V AGL+GRGGAGF T K + + R ++ N E +P Sbjct: 38 ALPHRSATELAAMVDAAGLQGRGGAGFPTARKIAAVAAAVGKTRRPAVVVANCCEGDPTA 97 Query: 99 YKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGK 158 KDR+L+++ PHL+++G + +A A++A R + + A L A+ E + Sbjct: 98 AKDRVLIDRSPHLVIDGAVAAARAVRADRVVLAVH-HGSPARQTLAVALTERPDE----- 151 Query: 159 NIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNN 218 + V RY+ E TAL+ L+ A P + P G G+PT V+N Sbjct: 152 -------RVRIEVVAVPARYLASEATALLRFLDTGDARPAGRLPI-WEKGVEGRPTLVDN 203 Query: 219 VETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREIL 274 ET ++ I G W+ + + GT L+ G V PG+ E+P G + R++L Sbjct: 204 AETFAHLALIARFGAGWFGAVGHPAEPGTMLLTLGGAVPRPGVIEVPTGASVRDVL 259 >UniRef50_C0R1F3 DH dehydrogenase n=3 Tax=Brachyspira RepID=C0R1F3_BRAHW Length = 387 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 70/378 (18%), Positives = 148/378 (39%), Gaps = 41/378 (10%) Query: 63 GGAGFSTGLKWSLMPKDESMNIRY------------LLCNADEMEPGTYKDRLLMEQLPH 110 G + F ++++ +D + N Y +L NA + +KD+ L+ PH Sbjct: 32 GNSFFDDLKEYTIFKRDITQNSIYQLLIDGNIKEDFILINAASFDYLVFKDKFLLRNNPH 91 Query: 111 LLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELF 170 L+++G + A L R I L+ Y+E + ++I EA +A + +D E+ Sbjct: 92 LILDGSVFIAKILNIKRIDIVLKDYYLEERDIILKSIVEAEDANFV--------YDIEIN 143 Query: 171 VHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILA 230 ++ Y + N R P F + ++ET+ + + Sbjct: 144 IYDEYAYY--------------NKYNIRITPSFLENKKY------IFDLETISQIAYLAH 183 Query: 231 NGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAW 290 G +++ + G+ ++ +G + NP L+E T R I++ G +++ + Sbjct: 184 IGGFTFKDYGNGEYKGSNILSITGDIINPNLYEFEMHTPLRNIVKAAGGTVKEYTIKCVF 243 Query: 291 QPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARES 350 G E + +++E ++G + + ++ +V + +F S Sbjct: 244 TNGFLNPPIDFETFQKMTLDYECFDSLNMKIGNGGICFIQEDRCIIRVVVKIIQFGKSIS 303 Query: 351 CGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQS 410 CG C+PC +G + + G D L++ + G + C + + S Sbjct: 304 CGKCSPCHNGFDLCEYYINRMLLGNSNFDDYSNLKEAVEMIKIGAS-CLYIRSLANCILS 362 Query: 411 AIKYFREEFEAGIKQPFS 428 ++ FR+EF I+ + Sbjct: 363 TMEMFRDEFVYLIENKIT 380 >UniRef50_C1V5Z7 NADH dehydrogenase subunit F n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=C1V5Z7_9EURY Length = 513 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 73/253 (28%), Positives = 111/253 (43%), Gaps = 18/253 (7%) Query: 171 VHTGAGRYICGEETALINSLEGR-RANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAIL 229 V G RYI GE T + SLEG R R +PP P T G +G+PT ++ TL V + Sbjct: 260 VAVGPERYIAGEPTMALESLEGNDRLEARLRPPGPETHGLYGRPTVIHTPRTLLQVREAI 319 Query: 230 ANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKA 289 E+ + D GT+++ +G V +P EL G R + Sbjct: 320 LRPEEFDAD---DADPGTRVVTVTGDVDSPATVELTTGAPLRAAAA-AVDRTETKMAIVG 375 Query: 290 WQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGT-ALAMAVDHEINMVSLVRNLEEFFAR 348 Q GG HLD + ++ +G+ LGT + + ++ V + F + Sbjct: 376 GQFGG------VTRHLDHTLSAPAL--SGANLGTEGVVELFGDDRCALATVGSRARFASE 427 Query: 349 ESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPL 408 E+CG C PCR+G +LR + G+ D +TL +L R + T C A + Sbjct: 428 ENCGRCVPCREGTTQLTDLLRDIYAGD---YDDDTLRELTRTMRNTST-CDFGRSAARTV 483 Query: 409 QSAIKYFREEFEA 421 ++A+ F EFEA Sbjct: 484 ETAMAAFEAEFEA 496 >UniRef50_D2S0Q1 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding protein n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2S0Q1_9EURY Length = 495 Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 104/393 (26%), Positives = 160/393 (40%), Gaps = 55/393 (13%) Query: 40 KALTGLSPD--EIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEP- 96 KA G +P E V V + L GRG W + +D+S+ + A + +P Sbjct: 130 KAAGGFAPSDAETVLNVG-SSLNGRG---------WEDLCQDDSLAETWRTARATDGDPV 179 Query: 97 ------GTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEA 150 G+ D LL+ P +++G + A + A R ++ E A A+ Sbjct: 180 VVVNGHGSPADTLLLSSAPFEVLDGASVLANTVAADRIVVYASSEDDTAVKTASSAVDTY 239 Query: 151 TEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG-RRANPRSKPPFPATSGA 209 + + V TG Y E T I ++EG R R +PP P G Sbjct: 240 PDPAA------------PMEVVTGPKEYRAAEPTMAIEAIEGNHRLEARLRPPGPERLGL 287 Query: 210 WGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTT 269 G+PT V+ TL ++ L G+E T++M G V EL + Sbjct: 288 DGRPTLVHTPRTLAHLAVGLREGIEEQ----------TRVMTVRGDVDAVATVEL---SE 334 Query: 270 AREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAV 329 R++ E DG FKA GG + LD+ + E++ A LGT + V Sbjct: 335 TRKLSELVNTVGVDG-SFKAACVGGRFGGITRD--LDVEIGLEALDNAD--LGTDGIVDV 389 Query: 330 DHEIN-MVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLC 388 + +V V F A E+CG C PCR+G +LR + G+ D + +++L Sbjct: 390 LSDAQCLVEFVGQRASFAAEENCGRCVPCREGTAQLTLLLRNVYDGD---FDAQAIDELG 446 Query: 389 RFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEA 421 R + + CA A P ++AI+ F EFEA Sbjct: 447 RVMA-SSSICAFGERAGRPARTAIEAFTSEFEA 478 >UniRef50_Q5V638 Putative NADH dehydrogenase I, F subunit n=1 Tax=Haloarcula marismortui RepID=Q5V638_HALMA Length = 507 Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 88/341 (25%), Positives = 142/341 (41%), Gaps = 34/341 (9%) Query: 86 YLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRR 145 ++CNA++ D L+ P +++G+ A + A +++ + +LR Sbjct: 181 VVVCNANDASDLPTGDDTLLSGAPMAVLDGIAAVAEYVDAGDAVVYVNESQTDVQADLRE 240 Query: 146 AIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG-RRANPRSKPPFP 204 AI A + + ++ G + GE TA + +LEG R PR +PP P Sbjct: 241 AIDAAADTLPVVPQLVA-----------GPDEFRAGEPTAALEALEGADRIEPRLQPPSP 289 Query: 205 ATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWEL 264 A G +G+PT V+ T V +A+ + + D GT+++ +G V + EL Sbjct: 290 AKRGLYGRPTVVHTPRTFAQVQQAVADPGSVDAD---AADPGTRIVAVAGDVADSATVEL 346 Query: 265 PFGTT---AREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRL 321 + R+ +E DG FK GG LD+ +S+ AG L Sbjct: 347 RSSASLAAVRKAVE------MDG-SFKMACVGGVLGGVTR--SLDMAPTAQSLRAAG--L 395 Query: 322 GT-ALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGD 380 GT + D V V F + E+ G C P R+G ++LR + G + Sbjct: 396 GTNGVVELFDTGRCTVETVGKRARFASMENSGRCVPGREGTKQLAELLRDIYDGSFENDK 455 Query: 381 IETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEA 421 I L ++ R +T AHAP P+ +AI F EF A Sbjct: 456 IRELSRVMRQSSNCQTG-AHAP---RPVTTAIDEFEPEFRA 492 >UniRef50_A9SZ52 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SZ52_PHYPA Length = 195 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 50/84 (59%), Gaps = 9/84 (10%) Query: 152 EAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWG 211 + GL G N G+G ++ +H GA YICGE+T + SLEG++ PR KPPFPA +G +G Sbjct: 40 KTGLPGNNACGSGHALDVLIHHGACAYICGEDTTPLESLEGKQNKPRLKPPFPANAGLYG 99 Query: 212 KPTCVNNV---------ETLCNVP 226 PT V NV +T C VP Sbjct: 100 FPTTVTNVAAVEPSISWDTHCIVP 123 >UniRef50_D2S0T7 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=2 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2S0T7_9EURY Length = 507 Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 88/347 (25%), Positives = 143/347 (41%), Gaps = 48/347 (13%) Query: 87 LLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRA 146 ++ NA+E + DR L+ P +++G+ A + A ++L E L+R Sbjct: 182 IVVNANEPDDRQQADRTLLAGAPIAVLDGVAAVAEYVGAEDAVVYLN----EHETTLQRH 237 Query: 147 IAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG-RRANPRSKPPFPA 205 + +A N + V G Y G TA + ++EG R PR +PP PA Sbjct: 238 VRQA-------ANAIEDELPVVPDVVVGPDEYRAGAPTAALEAMEGADRIEPRLQPPTPA 290 Query: 206 TSGAWGKPTCVNNVETLCNVPAILANGVEWYQNI-SKSKDAGTKLMGFSGRVKNPGLWEL 264 G +G+PT V+ T V V ++I + + D GT+L+ +G V+ P + EL Sbjct: 291 EYGLYGRPTIVHTPRTFAQV----RQAVHAPESIDADAPDPGTRLVTVTGDVETPAIVEL 346 Query: 265 PFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKA-GSRLGT 323 T L+ A M LK GG F T+ +G A +R T Sbjct: 347 DSSATLETTLD--AVSMEGSLKMACV--GGVFGGFTTD-----------LGVAPTARSLT 391 Query: 324 ALAMAVDHEINMVSLVR-------NLEEFFARESCGWCTPCRDGLPWSVKILRALERGEG 376 A + D + ++S R +F + + G C P R+G ++LR + G Sbjct: 392 AADLGTDGVVELLSDRRCAVATAGERAQFASEANSGRCVPGREGTKQLTELLRDVYAGAF 451 Query: 377 QPGDIETLEQLCRFLGPGKT--FCAHAPGAVEPLQSAIKYFREEFEA 421 + + + +L R + AHAP P+ +A+ F EF A Sbjct: 452 RS---DGIRELGRVMARSSNCQIGAHAP---RPVTTAMDEFESEFRA 492 >UniRef50_A7BY78 Electron transport complex protein rnfC n=4 Tax=Gammaproteobacteria RepID=A7BY78_9GAMM Length = 446 Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 65/240 (27%), Positives = 99/240 (41%), Gaps = 35/240 (14%) Query: 44 GLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRL 103 LS +E +N V+ AG+ G GGA F + +K++L + M I++L+ N E EP D Sbjct: 126 ALSIEEFINHVQKAGIVGMGGAAFPSHVKYAL---PDGMQIKHLVINGAECEPYLTNDHR 182 Query: 104 LMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGT 163 LM + P L+ G+ I L A + I + +A L++ I + KNI Sbjct: 183 LMLERPDTLLRGIEIVRQKLGATQATIGVELNKTDAINTLQKHIDQQQI-----KNIRMV 237 Query: 164 GFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLC 223 +Y G E +I SL P P G VNNV T+ Sbjct: 238 PLRV---------KYPQGAEKMMIKSLFNIEIPPGQ---LPRDVG-----VTVNNVSTIV 280 Query: 224 NVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRD 283 + G+ + I G V+ P +P GT ARE+L + GG+++ Sbjct: 281 AIADYFETGMPLIERIVTVSGPG---------VEQPANLMVPLGTPAREVLR-FCGGLKE 330 >UniRef50_D1N841 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N841_9BACT Length = 440 Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 70/234 (29%), Positives = 100/234 (42%), Gaps = 40/234 (17%) Query: 49 EIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQL 108 E++ + DAGL G GGA F T +K S P D++++ L+ N E EP D LM + Sbjct: 127 ELLKRTADAGLVGMGGAAFPTHVKLS-PPPDKTID--TLILNGAECEPYLTADHRLMLEQ 183 Query: 109 PHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFE 168 P ++EG ISA L YI + I+A L R AE F Sbjct: 184 PERVLEGAAISAKILNVKNVYIGVEANKIDAIEALGRRAAE-----------------FG 226 Query: 169 LFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAI 228 + V T +Y G E LI ++ GR+ P P A V NV T + Sbjct: 227 IKVATLKVQYPQGSEKQLIMAITGRKV-PTGGLPMDAGC-------VVQNVGTAAAMTDA 278 Query: 229 LANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGM 281 + G+ + ++ +G VKNPG W L GT + +E +AGG+ Sbjct: 279 VCRGIPLVERVTT----------ITGEVVKNPGNWLLKIGTPVIKAIE-FAGGV 321 >UniRef50_D1HKS5 Whole genome shotgun sequence of line PN40024, scaffold_27.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D1HKS5_VITVI Length = 350 Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 32/51 (62%), Positives = 38/51 (74%) Query: 48 DEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGT 98 D IVN++K +GL+GRGGAGF +GLKWS MPK YL+ NADE EPGT Sbjct: 216 DWIVNEMKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGT 266 >UniRef50_A5ZMX0 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5ZMX0_9FIRM Length = 583 Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 63/245 (25%), Positives = 109/245 (44%), Gaps = 39/245 (15%) Query: 39 RKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGT 98 K+L L+PDEI++ VK+AG+ G GGAGF T +K L P + + +L N E EP Sbjct: 265 HKSLDELTPDEIIDIVKEAGIVGMGGAGFPTCVK--LKP---AKPVDTILLNGCECEPYL 319 Query: 99 YKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGK 158 D ++ + ++ G+ A +G I + +A ++ +A+ Sbjct: 320 TADHKVLLEFADDIIFGLKAILKTTGAEKGIIVIEDNKPDAIELMKEKVADIG------- 372 Query: 159 NIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNN 218 + E+FV +Y G E LI + GR+ PA G V+N Sbjct: 373 -------NMEVFV--ARTKYPQGAEKTLIKRVMGRKVPSGG---LPADVGVI-----VDN 415 Query: 219 VETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYA 278 + T+ + + G+ + + T + G ++KNPG + + GT+ ++++ DY Sbjct: 416 ISTVKAISDAIQKGMPLIERV-------TTITG--EKIKNPGNFIIKIGTSVKDLI-DYC 465 Query: 279 GGMRD 283 GG D Sbjct: 466 GGFTD 470 >UniRef50_D1PFH3 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Prevotella copri DSM 18205 RepID=D1PFH3_9BACT Length = 450 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 99/356 (27%), Positives = 152/356 (42%), Gaps = 67/356 (18%) Query: 45 LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKD-RL 103 L+P+EIVN++K AGL G GGAGF T +K P ++ ++ N E EP D RL Sbjct: 125 LTPEEIVNRIKVAGLTGMGGAGFPTFIKLCPPPGAKA---ECVIINGVECEPYITADYRL 181 Query: 104 LMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGT 163 +ME +LV G+ + A + +GYI + AA+ L T Sbjct: 182 MMEHADEILV-GLNLLMKAAQVEKGYIGIEDNK-PAAIKLFEE---------------KT 224 Query: 164 GFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLC 223 D + + A +Y G E L++++ RR P + P P GA V NV T Sbjct: 225 ANDARIEIVPLAKKYPQGGEKQLVDAVI-RRQVP-APPAIPVNVGAI-----VQNVGTAF 277 Query: 224 NVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMR 282 V YQ + K+K + +G+ VKNPG + + GT +++E+ GG+ Sbjct: 278 AV----------YQAVMKNKPLFERYTTVTGKQVKNPGNFLVRMGTPFSQMIEN-CGGLP 326 Query: 283 DGLKFKAWQPGGAGTDFLTEA--HLDLPM-----EFESIGKAGSRLGTA-----LAMAVD 330 +G K AG + +A LD+P+ + A + A A VD Sbjct: 327 EG-DNKVL----AGGPMMGKAVISLDVPVTKGTNSITVLTDADAHRKKAQPCIRCAKCVD 381 Query: 331 --------HEINMVSLVRNLEEFFARE--SCGWCTPCRDGLPWSVKILRALERGEG 376 + + +S+V++ E A E SC C C+ P IL + G+G Sbjct: 382 ACPMGLEPYLLATLSVVKDYERLEAEEVTSCIACGSCQFTCPSHRPILDNIINGKG 437 >UniRef50_B1KU48 Respiratory-chain NADH dehydrogenase family protein n=10 Tax=Clostridiales RepID=B1KU48_CLOBM Length = 428 Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 70/244 (28%), Positives = 112/244 (45%), Gaps = 48/244 (19%) Query: 46 SPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLM 105 S + I++ ++ AG+ G GGAGF T +K D +N ++ NA E EP + + Sbjct: 76 SSNNILDLIQAAGIVGMGGAGFPTHIKM-----DVDLNGGVVIANAVECEPLLAHNINQI 130 Query: 106 EQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGF 165 P L+ +G+ + A+ A +G ++ + +EA +L+ I Sbjct: 131 INEPELIYKGLCYAMKAVNASKGIFAIKSKNVEAISSLKNVIK----------------- 173 Query: 166 DFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNV 225 D + + Y GEE A+I + G+ +P S+ P A + V+NVETL Sbjct: 174 DTNIEIVKLPDMYPMGEERAIIREVLGKLLDP-SQLPLEANA-------VVSNVETL--- 222 Query: 226 PAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGL-----WELPFGTTAREILEDYAGG 280 A +A VE K +K + G++KN GL +P GTT RE++E AGG Sbjct: 223 -AKIAEAVEL------KKPVISKNITVVGKLKN-GLESQVFINVPIGTTVRELIE-AAGG 273 Query: 281 MRDG 284 + DG Sbjct: 274 I-DG 276 >UniRef50_B0S407 Electron transport complex protein n=2 Tax=Finegoldia magna RepID=B0S407_FINM2 Length = 442 Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 66/251 (26%), Positives = 107/251 (42%), Gaps = 39/251 (15%) Query: 34 GYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADE 93 GY T LS + I+ ++K+AG+ G GGAGF T LK M K + I ++ N E Sbjct: 110 GYTETNDDFTQLSKEVILERIKEAGIVGLGGAGFPTHLK---MNKKPDVKIEQVILNGAE 166 Query: 94 MEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEA 153 EP D+L ME P + G+ I + +GYI + N ++AI A Sbjct: 167 CEPYLTSDQLNMELYPQKAIGGLKIIMKLMDCDKGYIGVED-------NKQKAIGILKNA 219 Query: 154 GLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKP 213 KNI + + +Y G+E LIN++ G++ SK G G Sbjct: 220 AKDEKNIS---------ICSVKTKYPQGDERRLINAITGKKI---SKAQRSNERGVQG-- 265 Query: 214 TCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTARE 272 N+ + +A Y + S +++ +G +K P +P GT ++ Sbjct: 266 ---------LNISSAMA----IYDAVVHSIPLTHRIVTMTGSAIKEPKNIYVPVGTKFKD 312 Query: 273 ILEDYAGGMRD 283 ++ DY G ++ Sbjct: 313 LV-DYCDGFKE 322 >UniRef50_C7HT97 Na(+)-translocating NADH-quinone reductase, A subunit n=3 Tax=Anaerococcus RepID=C7HT97_9FIRM Length = 443 Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 64/256 (25%), Positives = 114/256 (44%), Gaps = 41/256 (16%) Query: 29 YRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLL 88 Y + YE RK +T L+ ++IV +K+ GL G GGA F +K+S + I ++ Sbjct: 111 YDQEINYE--RKDVTNLTKEKIVEAMKENGLVGMGGASFPAHIKYS-----PNKPIDTVI 163 Query: 89 CNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIA 148 N E EP D +++ P ++V+ + + A+ A +G I + EA +++A+A Sbjct: 164 INGAECEPYVTCDDFILKTKPEVIVDALELLVQAVDAKKGIIAIEDNKAEAIEKVKKALA 223 Query: 149 EATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSG 208 + +L V T +Y G+E +IN++ R P+ Sbjct: 224 NKNSS--------------KLEVATMVTKYPQGDEKRIINAVLHRE--------VPSGGL 261 Query: 209 AWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFG 267 V+NV + AN V Y+ + K + M +G +KNP + + G Sbjct: 262 PMDVGVIVSNVSS--------ANAV--YEAVYYGKPLIERYMTVTGHGIKNPSNFLVRIG 311 Query: 268 TTAREILEDYAGGMRD 283 T+ ++E+ AGG+ + Sbjct: 312 TSFDHMIEE-AGGLTE 326 >UniRef50_C6SE09 Respiratory-chain NADH dehydrogenase, 51 kDa subunit n=1 Tax=Neisseria meningitidis alpha153 RepID=C6SE09_NEIME Length = 96 Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 29/53 (54%), Positives = 39/53 (73%), Gaps = 1/53 (1%) Query: 26 LDEYRSKNGYEGARKALT-GLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMP 77 LDEY + GY RK L+ +S +++++VK +GL+GRGGAGF TGLKWS MP Sbjct: 23 LDEYVKRGGYTALRKILSENISQTDVIDEVKTSGLRGRGGAGFPTGLKWSFMP 75 >UniRef50_C9M8J9 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8J9_9BACT Length = 439 Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 67/252 (26%), Positives = 105/252 (41%), Gaps = 37/252 (14%) Query: 42 LTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKD 101 + L P I + +K+ G+ G GGAGF T +K + PKD ++ L+ NA E EP D Sbjct: 115 IESLDPATIRDVIKNTGIVGMGGAGFPTFIKLT-PPKDAVVD--QLIINASECEPYLTCD 171 Query: 102 RLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIM 161 L+ + P +++G+ R + L E L I + + ++ Sbjct: 172 YRLILEDPQPIMDGI----------RALLVLFPE-----AKLSVGIEDNKPEAIAKFQVL 216 Query: 162 GTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVET 221 GFD + +Y G E LI ++ GR P PA GA V N T Sbjct: 217 LDGFDERASLKVLKSKYPQGGEKQLIYAITGRSVPPGK---LPADVGAI-----VCNTYT 268 Query: 222 LCNVPAILANG-VEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGG 280 ++ L +G + I+ S DA + NPG + +P G + RE+L+ G Sbjct: 269 TYDIGYALRHGRTSLKRIITVSGDA----------IANPGNYRVPLGISVREVLDAAGGF 318 Query: 281 MRDGLKFKAWQP 292 + +K A P Sbjct: 319 TAEPMKLLAGGP 330 >UniRef50_C6L993 Na(+)-translocating NADH-quinone reductase, A subunit n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L993_9FIRM Length = 672 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 68/256 (26%), Positives = 111/256 (43%), Gaps = 42/256 (16%) Query: 39 RKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGT 98 K+L L+PDEIV V++AG+ G GGAGF T +K PK I +L N E EP Sbjct: 354 HKSLDELTPDEIVEIVREAGIVGMGGAGFPTSVKLK-PPKP----IDTILLNGCECEPYL 408 Query: 99 YKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGK 158 D ++ + ++ G+ + A +G I + +A ++ A+ Sbjct: 409 TADHRVLLEFADDVIYGLKAIIKTVNAEKGLIVIEDNKPDAIELMQAKTADCD------- 461 Query: 159 NIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNN 218 + E+ V +Y G E LI + GR+ PR PA G V+N Sbjct: 462 -------NIEVVV--AKTKYPQGAEKMLIKRVMGRQV-PRGG--LPADVGCV-----VSN 504 Query: 219 VETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSG-RVKNPGLWELPFGTTAREILEDY 277 + T + + G+ + +++ +G RVK PG + + GT ++++ DY Sbjct: 505 ISTTKAISDAIQKGMPLIE----------RVVTVTGERVKKPGNYIVKIGTNTKDLI-DY 553 Query: 278 AGGMR-DGLKFKAWQP 292 GG+ D + KA P Sbjct: 554 CGGLVGDDITIKAGGP 569 >UniRef50_C0AVA8 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0AVA8_9ENTR Length = 41 Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 26/31 (83%), Positives = 29/31 (93%) Query: 2 KNIIRTPETHPLTWRLRDDKQPVWLDEYRSK 32 K IIR+ ETHPLTWRLRDD+QPVWLDEYR+K Sbjct: 8 KPIIRSAETHPLTWRLRDDRQPVWLDEYRAK 38 >UniRef50_B0K144 Electron transport complex, RnfABCDGE type, C subunit n=11 Tax=Clostridia RepID=B0K144_THEPX Length = 443 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 65/243 (26%), Positives = 100/243 (41%), Gaps = 36/243 (14%) Query: 41 ALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYK 100 +L LSP EI+ +++AG+ G GGAGF T +K S P D+ ++ +L N E EP Sbjct: 118 SLEDLSPKEIIEIIREAGITGMGGAGFPTHVKLS-PPSDKKID--TILVNGAECEPYLTT 174 Query: 101 DRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNI 160 D LM + P +V G+ A+ RG I + +A + LR A + KNI Sbjct: 175 DHRLMVEYPEKIVFGLKAIMKAVGVERGIIGVEKNKPDAILALREASKDE-------KNI 227 Query: 161 MGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVE 220 + T +Y G+E LIN++ GR P+ V N Sbjct: 228 Q---------IATLKVKYPQGDEKRLINAILGRI--------VPSGGLPMDVGVIVVNAA 270 Query: 221 TLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGG 280 T V + G Y+ ++ G +K P + GT ++++E G Sbjct: 271 TTKAVADAILEGKPLYERVTTITGHG---------IKQPKNLLVKIGTPLKDLIEQCGGF 321 Query: 281 MRD 283 D Sbjct: 322 TED 324 >UniRef50_A5N6F8 NADH dehydrogenase-related protein n=2 Tax=Clostridium kluyveri RepID=A5N6F8_CLOK5 Length = 320 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 5/106 (4%) Query: 335 MVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPG 394 MV +V++ F ++E CG C PCR+G+ +++ + G + DIE + Q+ ++ Sbjct: 162 MVDVVKDYLNFLSKEFCGKCIPCREGVKRMLEMATDICEGNAKERDIENMLQM-SYVISQ 220 Query: 395 KTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLINGIQPNL 440 + C A P+ AI+YFR+EFE +K N G+ NL Sbjct: 221 ASLCNLGKRAQNPIMIAIRYFRDEFEEHLK----NKRCRQGVCKNL 262 >UniRef50_D2ML02 NADH-quinone oxidoreductase, F subunit (Fragment) n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2ML02_9BACT Length = 110 Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 4/97 (4%) Query: 335 MVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPG 394 MV L FF ESCG C PCR G +++ +E G G D++ L Q+C F+ G Sbjct: 4 MVGQTLKLSTFFREESCGQCPPCRIGTEHLEELMAKIEEGTGTREDLDKLLQICGFV-KG 62 Query: 395 KTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ---PFS 428 +C GA +Q++++ FR EFE + + PF+ Sbjct: 63 TGYCTLVTGAAVLVQNSLRLFRHEFEEHVAKRACPFN 99 >UniRef50_C0QFQ4 RnfC1 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFQ4_DESAH Length = 455 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 6/97 (6%) Query: 46 SPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLM 105 SPDEI + AG+ G GGA F T +K +MP D+ + I LL N E EP D LM Sbjct: 138 SPDEIARLIHAAGIVGLGGAAFPTHVK--VMPNDKRL-IDSLLVNGCECEPYLTCDYRLM 194 Query: 106 EQLPHLLVEGMLISAFALKAYRGYIFL---RGEYIEA 139 ++ PH +V G L++ A+ A +I + + E IEA Sbjct: 195 KEAPHAIVAGALLAGRAVSAKEIFICIEDNKPEAIEA 231 >UniRef50_A8SLB1 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SLB1_9FIRM Length = 444 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 7/105 (6%) Query: 26 LDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIR 85 LDE GYE + +S +I++ +K+AG+ G GGAGF T +K + E Sbjct: 107 LDEL----GYEEKNLTIDEVSATDIIDAIKEAGIVGLGGAGFPTHVKLT---AREGQITD 159 Query: 86 YLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYI 130 Y++ N E EP D+L+ME P +V G+L++ A+ A +G + Sbjct: 160 YIIINCAECEPYLTSDQLMMELYPEKVVMGLLLAMKAMGAKKGIL 204 >UniRef50_Q7XZ61 NADH dehydrogenase (Fragment) n=1 Tax=Griffithsia japonica RepID=Q7XZ61_GRIJA Length = 170 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 44/111 (39%), Positives = 59/111 (53%), Gaps = 13/111 (11%) Query: 20 DKQPVWLDEYRS---------KNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGA-GFST 69 DK ++ + YR K G K L + I++++K R GA GF + Sbjct: 59 DKDRIFTNLYRDGDWRLKGAMKRGDWHMTKDLVQMGRSWILSEIKAVRPARRAGAPGFPS 118 Query: 70 GLKWSLMPKDESMNIR--YLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLI 118 GLK+S MP D S + R YL+ NADE EPGT KDR ++ PH LVEG L+ Sbjct: 119 GLKYSFMP-DGSPDGRPNYLVVNADESEPGTCKDREILRSDPHKLVEGCLL 168 >UniRef50_A9KN64 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=8 Tax=Bacteria RepID=A9KN64_CLOPH Length = 442 Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 81/321 (25%), Positives = 126/321 (39%), Gaps = 65/321 (20%) Query: 48 DEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQ 107 +E+ VK+ G+ G GGAGF T K+S + ++ N E EP R L+ Sbjct: 5 EELSQIVKEYGICGAGGAGFPTYAKFS-------NKVDTIILNCAECEPLLKLHRQLLRD 57 Query: 108 LPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDF 167 + +++ I A ++ A I ++ Y + IA A EA + M Sbjct: 58 RAYEVLKAFSIIAESIGAKEAIIVVKPSY-------KNTIA-AVEAEIGAYKNMSLKLCK 109 Query: 168 ELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPA 227 E+ Y G+E LI GR P P G V NVET+ NV Sbjct: 110 EV--------YPAGDEVVLIYEATGRVVKPGG---LPVDIGVA-----VFNVETVYNV-- 151 Query: 228 ILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKF 287 Y+ + + +KL+ G VK P +P G T +E++E GG+ K Sbjct: 152 --------YEAVINHRPVTSKLVSVVGEVKEPKTVRVPLGMTVKEVVE-MVGGITT--KE 200 Query: 288 KAWQPGGAGTDFL-TEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVR-----N 341 A+ GG + +E HL I K + + + + DH + ++R + Sbjct: 201 PAYLMGGPMMGSVESEQHL--------ITKTSNAI---IVLPKDHYV----IIRKESKPS 245 Query: 342 LEEFFARESCGWCTPCRDGLP 362 ++ A SC C C D P Sbjct: 246 IDLKRAAASCCHCEMCTDLCP 266 >UniRef50_C9NKP5 Oxidoreductase (Fragment) n=9 Tax=Streptomyces RepID=C9NKP5_9ACTO Length = 330 Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 9/221 (4%) Query: 205 ATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWEL 264 A SG G PT ++N ET + G Y + + + GT L+ SG V P + E+ Sbjct: 3 AESGVAGAPTLLSNAETYAQLAVAARLGPRRYGHTGLADEPGTVLLTVSGAVARPMVVEV 62 Query: 265 PFGTTAREILEDYAGG--MRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLG 322 P G R +L+ AG + G+ + G + A D + S+ G LG Sbjct: 63 PTGVPLRYVLQ-LAGAPPLPQGVLTGGYH----GNWIDSTALHDAVVSRASLAAVGGALG 117 Query: 323 TALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIE 382 + + E + + + A E+ G C PC+ GLP + L + G G P +E Sbjct: 118 AGAVLPIGPETCPIGESLRIANWLAAETAGQCGPCKLGLPAAAGGLSDVLNG-GGPAALE 176 Query: 383 TLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGI 423 L ++ + + G+ C H G+ L S + F ++ A + Sbjct: 177 ALREVTQAVK-GRGACKHPDGSARFLSSTLSAFTDDLAAHV 216 >UniRef50_Q603B2 Electron transport complex, C subunit n=1 Tax=Methylococcus capsulatus RepID=Q603B2_METCA Length = 523 Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 63/237 (26%), Positives = 97/237 (40%), Gaps = 38/237 (16%) Query: 45 LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLL 104 L+PDE+ + +AG+ G GGA F T +K P +++ L+ N E EP D L Sbjct: 122 LAPDELRRIIFEAGIVGLGGAAFPTAVKTD--PGHRAIDT--LILNGAECEPYITCDDSL 177 Query: 105 MEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTG 164 + P ++EG I L R + + + EA LR I TG Sbjct: 178 LRHFPREVLEGARILMRVLGVERCLLGIEDDMPEAIRALR--------------EIQETG 223 Query: 165 FDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCN 224 ++ V T Y G E LI L GR R PA +G NV T Sbjct: 224 EYQDIDVITVPALYPSGGEKQLIRILTGREVPTRG---IPADAG-----VVCQNVGTAAA 275 Query: 225 VPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGG 280 V Y+ + + + +++ +G+ ++NPG W GT +++ Y+GG Sbjct: 276 V----------YRAVVRGEPLIERIVTVTGKGIRNPGNWLTRIGTPIADLVR-YSGG 321 >UniRef50_C4FA62 Putative uncharacterized protein n=2 Tax=Collinsella RepID=C4FA62_9ACTN Length = 447 Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 60/251 (23%), Positives = 100/251 (39%), Gaps = 35/251 (13%) Query: 38 ARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPG 97 A K T + +E + V+D+G+ G GGA F T W M E + +L+ NA E EP Sbjct: 109 ALKPPTYSNKEEFIACVRDSGMVGLGGASFPT---WFKMRAPEGKSFEFLVVNAMECEPY 165 Query: 98 TYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLG 157 D M + +++G+ + AL+ I + EA + L+R + E Sbjct: 166 ITSDYRQMMEHSERVIDGVFRTIEALEIPAAVIGVEDNKPEAILELKRVVKE-------- 217 Query: 158 KNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVN 217 G + + V +Y G E LI + GR PA V Sbjct: 218 -----KGREDRIEVMEIPTKYPAGGEKVLIKATTGRD--------VPAGGLPIDVGCLVV 264 Query: 218 NVETLCNVPAILANGVEWY-QNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILED 276 NV T+ V G+ + ++ + D + NPG + +P G + R+++E Sbjct: 265 NVTTISRVEQYFRYGMPLTCKTVTVTGDC----------IANPGNYRIPLGMSVRDVIEA 314 Query: 277 YAGGMRDGLKF 287 G +++ K Sbjct: 315 TGGMVKEPKKI 325 >UniRef50_A9NEB0 NADH oxidoreductase complex RnfABCDGE type, C subunit n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NEB0_ACHLI Length = 432 Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 5/108 (4%) Query: 45 LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLL 104 L+ ++ VN K+AGL G GG+GF T +K + K I +L N E EP D + Sbjct: 119 LTKEDYVNITKEAGLVGLGGSGFPTYIKLNTKNK-----IDIILANGVECEPKLISDYEV 173 Query: 105 MEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATE 152 M + P L+ G++ + A+ A +G I ++ Y+E +R ++ TE Sbjct: 174 MMESPDELIRGLIYAMKAVGAPKGVIAVKKRYVELVERIRFSLNSYTE 221 >UniRef50_Q67R12 Na+-transporting NADH-quinone reductase subunit 1 n=1 Tax=Symbiobacterium thermophilum RepID=Q67R12_SYMTH Length = 446 Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 37/235 (15%) Query: 45 LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLL 104 L P I ++V+ AGL G GGAGF +K + P E ++ N E EP D L Sbjct: 124 LDPAFIRDRVRQAGLVGMGGAGFPAAVKLTPKPGTEP---DVVILNGAECEPAITSDHRL 180 Query: 105 MEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTG 164 M + P +V G+ + A A RG I + +AA L + +A Sbjct: 181 MLEHPEQVVLGLRLFMRASGAKRGIIAVEANKPDAAGKLSQLVAG--------------- 225 Query: 165 FDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCN 224 D + V RY G E L+ +L RRA P G P V V Sbjct: 226 -DPAISVEVLPVRYPQGAEKMLVWALL-RRAVP-----------VGGIPLDVGAVVQN-- 270 Query: 225 VPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAG 279 +A +++ + +++ +GRV PG W +P GT+ +++E G Sbjct: 271 ----VATAAAAAVALAEGRPLTHRIVTVTGRVTRPGNWLVPLGTSFVDLVEASGG 321 >UniRef50_Q3A1L5 Pyridine nucleotide-disulphide oxidoreductase n=2 Tax=Deltaproteobacteria RepID=Q3A1L5_PELCD Length = 663 Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 1/119 (0%) Query: 305 LDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWS 364 D EF+ + LG D E +++ ARESCG CTPCR G Sbjct: 30 FDQMDEFDPGNPVKAFLGANGFFVFDKETSILDAAHQYVATAARESCGKCTPCRVGTEVL 89 Query: 365 VKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGI 423 L AL +GE ++ + L + + C A +PL + +++FR+EFE I Sbjct: 90 TSKLEALSKGELGADAVDEILTLAEHI-KSTSMCGLGQTATDPLIAMLRHFRDEFEVNI 147 >UniRef50_Q8RIJ6 Nitrogen fixation iron-sulphur protein RNFC n=17 Tax=Bacteria RepID=Q8RIJ6_FUSNN Length = 441 Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 67/265 (25%), Positives = 110/265 (41%), Gaps = 47/265 (17%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 +T + +DK+ W + + +N E +KAL + +++ G+ G GGA F T +K Sbjct: 100 MTVFIENDKKEEWAELSKIENWEEADKKALLDI--------IREKGIVGIGGATFPTHVK 151 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 + P + + L+ N E EP D LM + P +VEG+ I L Y+ + Sbjct: 152 LNPPPNTQ---LDSLILNGAECEPYLNSDNRLMLENPKSIVEGIKIIKKILNVPNVYVGI 208 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 EA ++R+ ATE GTG + +Y G E LI S+ Sbjct: 209 EDNKPEAIESMRK----ATE---------GTGINIVPL----KTKYPQGGEKQLIKSILD 251 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGF 252 R+ P + P+ G V N T + Y+ + K K++ Sbjct: 252 RQV-PSGQ--LPSAVG-----VVVQNTGTAAAI----------YEAVVNGKPLIEKVVTV 293 Query: 253 SGR-VKNPGLWELPFGTTAREILED 276 SG+ +KNP ++ GT IL++ Sbjct: 294 SGKAIKNPKNVKVAIGTPFSYILDN 318 >UniRef50_Q6AIR8 Related to propanediol utilization protein (PduS) n=2 Tax=Desulfotalea psychrophila RepID=Q6AIR8_DESPS Length = 447 Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 57/235 (24%), Positives = 90/235 (38%), Gaps = 43/235 (18%) Query: 45 LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLL 104 ++ D ++ + DAG+ G GGAGF +K+ + ++ N E EP + D+ + Sbjct: 3 MNKDSLLRSILDAGIVGEGGAGFPAHVKY-------DTQVDTVIANGCECEPLLHTDQHI 55 Query: 105 MEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTG 164 M +V M A RG I ++ +Y E A + A+ E GTG Sbjct: 56 MRTRAADIVVAMQAIVSVTGATRGVIGIKRKYTEIA----KIFADCIE---------GTG 102 Query: 165 FDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCN 224 + + Y G+E L+ + G+ P P GA V NV TL Sbjct: 103 LELVQLDNF----YPAGDEQTLVYEVTGKTIPPLG---LPKDVGAV-----VANVGTLAG 150 Query: 225 VPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAG 279 V + K K++ +G V +P + +P GT E L G Sbjct: 151 V-----------ADAMKGTPVTHKIVTVTGNVGSPAVIRVPLGTKLSECLAHCGG 194 >UniRef50_C9R993 Methyl-viologen-reducing hydrogenase delta subunit n=10 Tax=cellular organisms RepID=C9R993_AMMDK Length = 270 Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 1/88 (1%) Query: 308 PMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKI 367 P +++ +GKA S LG+A + +D ++MV +VR E+ +ESC C PC G + + + Sbjct: 138 PTDWDELGKAASVLGSAGKVFLDESVSMVDIVRYFMEYVQQESCAECRPCPIGTKFILDL 197 Query: 368 LRALERGEGQPGDIETLEQLCRFLGPGK 395 L L G P D +++L R + G Sbjct: 198 LNDLGNGGAMP-DSSLVKELARTIKQGS 224 >UniRef50_D2RN96 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RN96_ACIFE Length = 455 Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 82/365 (22%), Positives = 141/365 (38%), Gaps = 75/365 (20%) Query: 17 LRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLM 76 +++D Q ++ + ++ E ++PD I +++ G+ G GGA F T +K++ Sbjct: 101 IKNDGQDTLCEDIKPRSEEE--------ITPDLIRQVLREKGIAGMGGATFPTAVKYA-P 151 Query: 77 PKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEY 136 PK+ I +L N E EP D + + +++G+ A A +G I + Sbjct: 152 PKEGHCPIDTILLNGIECEPFVTADHRTLLEYADEIIQGLKYFMLASGAAKGIIGIEDNK 211 Query: 137 IEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRAN 196 +A +++ +A + + V +Y G E LI + GR Sbjct: 212 PDAIELMQKKVAG----------------EANIEVCVCKEKYPQGSEKHLIYAATGRTVP 255 Query: 197 PRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRV 256 R PA G V+NV T + N + Y+ + G V Sbjct: 256 DRG---LPADVGVI-----VDNVGTAVAACRAVKNNIPLYERVVTISGDG---------V 298 Query: 257 KNPGLWELPFGTTAREILEDYAGGMR-DGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIG 315 PG + + GT + +E AGG++ D K A GG F + LD P I Sbjct: 299 NKPGNYIVRLGTLFSDAVEKAAGGLKGDPGKIVA---GGMMMGFAVNS-LDYP-----IT 349 Query: 316 KAGSRLGTALAMAVDHEINMVSLVRNLEEFFAR----ESCGWCTPCRDGLPWSV---KIL 368 K S L L+ N + FA+ + C C C D P + +I+ Sbjct: 350 KGSSGL----------------LIFNSKSPFAQYVEPDPCVHCARCVDACPMKLEPTEIV 393 Query: 369 RALER 373 +A+++ Sbjct: 394 QAVKK 398 >UniRef50_B5JW06 EleCtron transport complex, rnfabcdge type, c subunit n=2 Tax=Gammaproteobacteria RepID=B5JW06_9GAMM Length = 792 Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 58/245 (23%), Positives = 105/245 (42%), Gaps = 37/245 (15%) Query: 43 TGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDR 102 T L P + N++++AG+ G GGA F + +K + P S I L+ N E EP D+ Sbjct: 108 TQLDPISLRNRIREAGIVGLGGAAFPSAVKLNPGP---SRKIHTLVINGAECEPYITCDQ 164 Query: 103 LLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMG 162 LM + +V+G+ I+ AL R +I + A L +AIA+ Sbjct: 165 TLMSERADQVVQGIQIAMHALGVERCWIAIEDSMPTAHEGLSQAIAQCG----------- 213 Query: 163 TGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETL 222 D ++ + Y G E L+ L G+ P + + + Sbjct: 214 ---DTKIEIKVVPTIYPTGGEKQLLKVLTGQEVPSNGLP---------------SEIGVV 255 Query: 223 CNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGM 281 C+ P + V Y+ I+ + ++++ +G+ + +P E FGT ++ + AGG Sbjct: 256 CHNPGTI---VAMYRAIAFGEPLISRIVTITGQGIASPRNIEALFGTPIAHLVAE-AGGY 311 Query: 282 RDGLK 286 + G++ Sbjct: 312 QKGVE 316 >UniRef50_Q0PIB6 Ethanolamine utilization Fe-S center protein eut n=1 Tax=Heliobacillus mobilis RepID=Q0PIB6_HELMO Length = 444 Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 99/392 (25%), Positives = 156/392 (39%), Gaps = 66/392 (16%) Query: 48 DEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQ 107 ++IV VK+AG+ G GGAGF T +K + S +I ++ N E EP + LM Sbjct: 3 EKIVKAVKEAGVVGAGGAGFPTHIKM-----NASADI--IIANGAECEPLLRSHQHLMAA 55 Query: 108 LPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDF 167 +V G++ A A + YI L+ +Y A L ++I + Sbjct: 56 ESDRVVLGLIAVMLATGAQKSYIGLKKKYSVAIEALEQSIERHAKG------------RV 103 Query: 168 ELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPA 227 ELF+ Y G+E L+ + G + P P V NVETL N+ Sbjct: 104 ELFILPDF--YPAGDEQVLVYEVTG-KIIPEGGIPLHVG-------VVVINVETLVNITK 153 Query: 228 ILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKF 287 L +GV TK + +G V+ P ++P G R ++E G + + Sbjct: 154 AL-DGVPVM----------TKYVTVTGAVRQPVTLKVPIGIPIRLLIEAAGGAIVNDY-- 200 Query: 288 KAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHE-INMVSLVRNLEEFF 346 A GG + E +D P+ + G + + DH I +L + Sbjct: 201 -ALIDGGPMMGRIVE--VDSPVTKTT--------GGIIVLPKDHSLIAGKTLPWSAIANR 249 Query: 347 ARESCGWCTPCRDGLPWSV--------KILRALERGEGQPGDIETLEQLCRFLGPGKTF- 397 ++ C C C D P + +I++A+ G GD T LC G TF Sbjct: 250 SKSVCCACRACTDCCPRHLLGHSLEPHRIMQAIGNGTSYQGDAITRAFLCSECGACDTFG 309 Query: 398 CAHAPGAVEPLQSAIKYFREEFEAGIKQPFSN 429 C+ + P + ++ R+ AGIK P+ N Sbjct: 310 CSM---GLSPRRVNMELKRQLSAAGIKNPYHN 338 >UniRef50_A5HYR2 Electron transport complex protein n=37 Tax=Bacteria RepID=A5HYR2_CLOBH Length = 439 Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 83/362 (22%), Positives = 136/362 (37%), Gaps = 73/362 (20%) Query: 45 LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLL 104 ++ +EI+ ++ AG+ G GGA F T +K S P + I ++ NA E EP D L Sbjct: 119 MTKEEIIKLIQQAGIVGMGGACFPTHVKLSPPPDKK---IDSIIVNAAECEPYLTCDHRL 175 Query: 105 MEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTG 164 M + +VEG+ I +GYI + +A +++A G+ Sbjct: 176 MLEESDKIVEGLKIILKIFPEAKGYIGIENNKPDAIEAMKKA-----SEGIAN------- 223 Query: 165 FDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCN 224 + V +Y G E LI +++GR PA +G V N T+ Sbjct: 224 ----IEVKALKTKYPQGAEKQLIYAIKGREVQSGK---LPADAGCV-----VQNTATV-- 269 Query: 225 VPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRD 283 E Y + + +++ +G VK P + GT RE++E G D Sbjct: 270 --------REIYNAVVLGRPLIERIITVTGEAVKEPKNIRMKLGTNLRELVEFCGGYKED 321 Query: 284 GLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLE 343 +K + P +T LD+P S G ++SL Sbjct: 322 PVKVISGGPMMG----MTIPTLDIPTVKGSSG-------------------LLSLTTAQA 358 Query: 344 EFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQL----------CRFLGP 393 SC C C + P ++ I L+ + G++ + E+L C F+ P Sbjct: 359 VLPQASSCIRCGRCVEACPMNL-IPSTLDSLSNR-GELASFEELHGIDCIECGCCTFVCP 416 Query: 394 GK 395 K Sbjct: 417 AK 418 >UniRef50_A1WT48 Electron transport complex, RnfABCDGE type, C subunit n=3 Tax=Proteobacteria RepID=A1WT48_HALHL Length = 448 Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 56/237 (23%), Positives = 95/237 (40%), Gaps = 36/237 (15%) Query: 40 KALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTY 99 + L LS +E+V ++DAG+ G+GGA F T LK+++ E + L+ N E EP Sbjct: 121 RTLEALSGEELVEAIRDAGIVGQGGASFPTHLKFAV---PEGYTVDTLVVNGCECEPFLS 177 Query: 100 KDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKN 159 D LM + +++G+ ++ A+ A I + + + Sbjct: 178 ADHRLMVEATDSIIDGVRLAMRAVGAPEAVI---------------GVEDNKPDAVAALQ 222 Query: 160 IMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNV 219 G D V + +Y G E LI +L R P+ + VNN+ Sbjct: 223 AAVAGEDAIRVVQLKS-KYPQGSEKMLIKALLDRE--------VPSGGLPYEIGAVVNNI 273 Query: 220 ETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILED 276 T+ + +L G + + G V+ PG + +P GT R +LE+ Sbjct: 274 GTMAQLGYLLPRGEGLIERVITVAGPG---------VERPGNYRVPVGTPLRYLLEE 321 >UniRef50_B6BWH5 Electron transport complex protein RnfC n=2 Tax=Betaproteobacteria RepID=B6BWH5_9PROT Length = 503 Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 62/241 (25%), Positives = 104/241 (43%), Gaps = 41/241 (17%) Query: 43 TGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDR 102 + LS + + ++K +G+ G GGA F T +K + S I+ L+ NA E EP D Sbjct: 122 SNLSSEALYEKMKSSGIVGLGGATFPTHIKLN------SNKIKTLIVNAAECEPYITCDD 175 Query: 103 LLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMG 162 + M++ +EG+ I+ LK I + +A L+ + ++ KNI Sbjct: 176 MAMQEKTKEFIEGIQITMDILKIPHAIIGIEDNKPKAIEKLKTVLNKS-------KNIS- 227 Query: 163 TGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETL 222 + Y G+E LI + G + SK P G V NV TL Sbjct: 228 --------IKVVPTVYPSGDEKRLIYLMLGLKI---SKEKRPVDFGIQ-----VFNVATL 271 Query: 223 CNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMR 282 ++ G +Y S+ ++++ +G +K P +E GT +E+++D AGG Sbjct: 272 ISI------GRFFYH----SEPVISRIVTVTGALKRPNNYEALIGTPIQELIKD-AGGKS 320 Query: 283 D 283 D Sbjct: 321 D 321 >UniRef50_A1TZ63 Electron transport complex, RnfABCDGE type, C subunit n=9 Tax=Gammaproteobacteria RepID=A1TZ63_MARAV Length = 609 Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 55/232 (23%), Positives = 97/232 (41%), Gaps = 39/232 (16%) Query: 45 LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLL 104 L + ++ ++++AG+ G GGAGF T +K P+D ++ L+ N E EP D + Sbjct: 122 LDREAVLQRIREAGISGMGGAGFPTDIKLR-PPRDRKVDT--LILNGAECEPYITADDMT 178 Query: 105 MEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTG 164 M + +V G+ + A+ L+ R + + EA +R+A+A GT Sbjct: 179 MREQAAEVVAGLKVMAWILRPSRCVVGIEDNKPEAIAAMRKAVA-------------GTQ 225 Query: 165 FDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCN 224 + + +Y G E LI L G+ PA G C N Sbjct: 226 IEIAVV----PTKYPSGGEKQLIQILTGQEVPSGG---IPADIGVM----CQN------- 267 Query: 225 VPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILE 275 + V + + + K ++++ +G V+ PG +E+ GT +LE Sbjct: 268 ----IGTAVAVGRAVFEGKPLISRVVTVTGEAVREPGNFEVLIGTPIHHLLE 315 >UniRef50_C0WAW3 Electron transport complex protein n=1 Tax=Acidaminococcus sp. D21 RepID=C0WAW3_9FIRM Length = 447 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 79/336 (23%), Positives = 132/336 (39%), Gaps = 65/336 (19%) Query: 45 LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLL 104 ++PD I +++ G G GGA F T +K++ PK+ + I +L N E EP D + Sbjct: 113 ITPDVIRTALREGGSVGLGGATFPTAVKYA-PPKEGARPIDTILLNGIECEPFITGDHRI 171 Query: 105 MEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTG 164 M + +++G+ A A +G I + +A ++ +A Sbjct: 172 MLEWADEMIQGLKYFMMASGAQKGIIGIEDNKPDAIALVKEKVAS--------------- 216 Query: 165 FDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCN 224 + + V A +Y G E LI + GR R PA G V+NV T Sbjct: 217 -EPNIEVCVCAEKYPEGSEKHLIYAATGRTVPDRG---LPADVGVI-----VDNVGTAVA 267 Query: 225 VPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDG 284 ++ + Y+ ++ G V PG + GT + +E AGG++ G Sbjct: 268 CYRMVKKNIPLYERVTTISGDG---------VNKPGNYICRLGTLYSDAVELAAGGLK-G 317 Query: 285 LKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEE 344 K + GG F T + LD P+ ++ A+ L+ N E Sbjct: 318 TPGK-FISGGMMMGFSTPS-LDYPI---------AKWSGAV------------LIFNSES 354 Query: 345 FFAR----ESCGWCTPCRDGLPWSV---KILRALER 373 FA+ C C C D P + +I++A++R Sbjct: 355 PFAQYVEPSPCVHCARCVDACPMKLEPTEIVQAVKR 390 >UniRef50_Q73PG1 Na(+)-translocating NADH-quinone reductase, A subunit n=2 Tax=Treponema RepID=Q73PG1_TREDE Length = 480 Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 86/366 (23%), Positives = 139/366 (37%), Gaps = 71/366 (19%) Query: 48 DEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQ 107 +E + +V+DAG+ G GGA F T +K S P I Y++ N E EP D + Sbjct: 121 EEALKRVRDAGITGMGGASFPTHVKLSPPP---DAKIEYVIANGAECEPYLCTDAATIFS 177 Query: 108 LPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDF 167 +V+G+ I+ + A +G I L + L +AI++ + N + G + Sbjct: 178 DSDSIVDGLAITMRIVGAKQGIIALEDNKKDLVPVLEKAISK------IKANPIAAGA-Y 230 Query: 168 ELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPA 227 ++ V +Y G E L +++ R P+ + + NV TL Sbjct: 231 DISVQLCKTKYPQGGEKTLTDAVVNRE--------IPSGGLPFQIGCVIQNVGTL----- 277 Query: 228 ILANGVEWYQNISKSKDAGTKLMGFS-----GRVKNPGLWELPFGTTARE---------- 272 + IS++ G L+ + G + P P GT + Sbjct: 278 ---------KAISEAFRLGKPLIDRALTIGGGACEKPLNVIAPIGTCVGDLIPSVVSLKP 328 Query: 273 -ILEDYAGGMRDGLKFK----AWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAM 327 +++ +GG G K Q +G FLT+ + L E IG G + + Sbjct: 329 GVVKIISGGPMMGFAMKNADFPIQKNTSGVLFLTKEEISLEEESPCIG-----CGKCIDV 383 Query: 328 AVDHEINMVSLVRNLEEFFARES----------CGWCT---PCRDGLPWSVKILRALERG 374 H ++ V +VR L E+ CG C P R L VKI + + R Sbjct: 384 CSCH-LSPVLIVRALNAGNTEEAIRCGLLDCVECGTCAYTCPARIKLVQRVKIGKQIARE 442 Query: 375 EGQPGD 380 E Q D Sbjct: 443 EKQKRD 448 >UniRef50_B2A1V2 Electron transport complex, RnfABCDGE type, C subunit n=2 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A1V2_NATTJ Length = 440 Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 64/232 (27%), Positives = 97/232 (41%), Gaps = 40/232 (17%) Query: 45 LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLL 104 LS +E+ +KD+G+ G GGA F T + ++S I YLL N E EP D Sbjct: 119 LSDEELKELLKDSGIAGMGGAAFPTYVNV-----NQSQPIEYLLLNGAECEPYLTCDHRQ 173 Query: 105 MEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTG 164 M ++P L++G I + A + YI + N AI +E +N Sbjct: 174 MIEMPEKLIKGAEILMRIIGAKKCYIGIE-------TNKPDAIEVLSEQTKELEN----- 221 Query: 165 FDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCN 224 + V A +Y G ++ LIN++ R+ PR A S G V NV T Sbjct: 222 ----MEVVPLASKYPQGYKSHLINAITDRKV-PRG-----ARSAELG--CIVRNVGTTIA 269 Query: 225 VPAILANGVEWYQNISKSKDAGTKLMGFSG-RVKNPGLWELPFGTTAREILE 275 V Y+ + K +++ SG ++ PG + + GT ILE Sbjct: 270 V----------YEAVVYEKPLIERVVTVSGPKIPQPGNFSIRIGTPISHILE 311 >UniRef50_C9XNL2 Electron transport complex protein n=7 Tax=Clostridiales RepID=C9XNL2_CLODC Length = 445 Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 66/256 (25%), Positives = 100/256 (39%), Gaps = 43/256 (16%) Query: 42 LTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKD 101 L LS ++IV +K+AG+ G GGA F +K S P ++ ++ N E EP D Sbjct: 116 LEDLSKEDIVGIIKEAGIVGMGGATFPNHVKVSPPPDSKA---EVVILNGAECEPYLTAD 172 Query: 102 RLLMEQLPHLLVEGMLISAFALKAYRGYIFL---RGEYIEAAVNLRRAIAEATEAGLLGK 158 LM + P +V G+ L +G+I + + + IEA N+ + +E GL K Sbjct: 173 HRLMVENPEDVVFGLRALMKVLDVKKGFIGIETNKPDAIEAIQNVAKDYSEIEVVGLQVK 232 Query: 159 NIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNN 218 Y G E LI + G+ P +GA V+N Sbjct: 233 -------------------YPQGAEKQLIYACTGKEVPSGG---LPIAAGAV-----VDN 265 Query: 219 VETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYA 278 V T + + G+ + I T + G +K P GT EI+E Sbjct: 266 VATAAQIAKSIKTGMPLVERI-------TTITGSC--IKEPKNLITKVGTLVSEIIEQ-C 315 Query: 279 GGMRDGLKFKAWQPGG 294 GG ++ K GG Sbjct: 316 GGFKEDKKIGKVIMGG 331 >UniRef50_B1ZMR0 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=2 Tax=Bacteria RepID=B1ZMR0_OPITP Length = 441 Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 53/194 (27%), Positives = 83/194 (42%), Gaps = 37/194 (19%) Query: 87 LLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRA 146 ++ N E EP +KD +ME+ LV G+ ++ A+ A G + L+ + A + A Sbjct: 33 VIANGAECEPLLHKDAAVMERNARDLVTGLQLAMEAVGATTGIVGLKAKNQHA----QEA 88 Query: 147 IAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPAT 206 + EA + +++G D+ Y G+E L+ + GR P P Sbjct: 89 VTEACRGTTIRIHLLG---DY----------YPAGDEYDLVYTTTGRLIPPAG---IPLN 132 Query: 207 SGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPF 266 GA V+NVETL N+ A ++ + K + +G V P +P Sbjct: 133 VGAV-----VSNVETLVNIAA-----------AAEGRPVTHKTLTIAGAVAAPATLTVPL 176 Query: 267 GTTAREILEDYAGG 280 GTT R L D AGG Sbjct: 177 GTTLRACL-DAAGG 189 >UniRef50_Q1K3H5 FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3H5_DESAC Length = 651 Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 20/164 (12%) Query: 261 LWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSR 320 + ++ F + REI+++ GG D L L LP E+ GK G+ Sbjct: 1 MSDIVFSSWGREIVDNRNGGEAD----------------LASLKLKLPTEYLD-GKVGAF 43 Query: 321 LGTALAMAVDHEINMVSLVRN-LEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPG 379 +G + +D E ++V++ ++ + CG CTP + G L + +G G+ Sbjct: 44 MGWDGVVLLDGETDVVAMAAEYMKRVQEKHCCGKCTPGKKGTRVMQDTLARILQGHGEER 103 Query: 380 DIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGI 423 D+E +E L L K C + P+ +KYFR+++ A I Sbjct: 104 DLEIIENLKSLLEGCK--CTLCMTSAIPVLDTVKYFRDDYMAYI 145 >UniRef50_C4LFE2 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=63 Tax=Gammaproteobacteria RepID=C4LFE2_TOLAT Length = 459 Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 72/242 (29%), Positives = 100/242 (41%), Gaps = 44/242 (18%) Query: 39 RKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGT 98 R L L + + +V+ AG+ G GGAGF +K L K E L NA E EP Sbjct: 14 RAVLQSLDLNTLPEKVRQAGIVGAGGAGFPAYVK--LQAKAE-----IYLVNAAECEPML 66 Query: 99 YKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGK 158 D+ LM Q L+ G+ A A G I L+ +Y A L LL + Sbjct: 67 KVDQQLMTQHASQLIRGLRYGMAATGAREGIIALKAKYQPAIAALE---------PLLPE 117 Query: 159 NIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNN 218 N+ +H Y G+E I GRR P + P + G VNN Sbjct: 118 NVR---------IHILPDVYPAGDEVITIWQATGRRVPPAA---LPISIG-----VVVNN 160 Query: 219 VETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYA 278 V+TL N LA +E ++ + + +G V+NP +P G T R++L A Sbjct: 161 VQTLLN----LAAALETETPVTH------RTLTINGAVRNPMTVTVPLGVTLRDVL-TLA 209 Query: 279 GG 280 GG Sbjct: 210 GG 211 >UniRef50_C9A8J9 Respiratory-chain NADH dehydrogenase 51 kDa subunit n=3 Tax=Enterococcus casseliflavus RepID=C9A8J9_ENTCA Length = 445 Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 87/381 (22%), Positives = 143/381 (37%), Gaps = 78/381 (20%) Query: 48 DEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQ 107 + I+ +++ G+ G+GGA F T +K+S+ DE+ I L+ N E EP D LM++ Sbjct: 125 ETILKKIRQGGIAGKGGATFPTHVKFSI---DENKKIHTLILNGSECEPFLRSDAFLMQK 181 Query: 108 LPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDF 167 +++G I+ L + I + + A ++ A AE D Sbjct: 182 EAKKIIQGAKIAQKLLADPKIIIGIEDDKPLAISAMQAASAE----------------DD 225 Query: 168 ELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPA 227 + V T Y G E L+ L + P + G L NV Sbjct: 226 TIEVVTVPTVYPTGGEKQLVELLTDQEV------PLGGLTADIGI--------VLINV-- 269 Query: 228 ILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKF 287 A + + K + +G V++P + + P GT A E++ D+AGG + Sbjct: 270 --ATSFAIAEAVCYDKPLIERYTTVTGDVQHPRIVKNPLGTLAGELI-DFAGGFQ----- 321 Query: 288 KAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFA 347 GA + + L PM +GK+ L + + +V + +A Sbjct: 322 ------GAPSKLI----LGGPM----MGKSVKTLKVPVTKGSN---GIVVFNEETDWLYA 364 Query: 348 RESCGWCTPCRDGLPWSVKILRALERGE-GQPGDIETLEQL----------CRFLGPGKT 396 C C C + P +L +E + + GD + E+L C F+ P K Sbjct: 365 ENPCIRCNKCVEACPM---LLMPMEIDQFYRAGDYQKCEELLAEACINCGACTFVCPAKR 421 Query: 397 FCA----HAPGAVEPLQSAIK 413 A A G V LQ K Sbjct: 422 SLAANITAAKGKVAQLQKEAK 442 >UniRef50_A5N7M5 RnfC n=6 Tax=Clostridiales RepID=A5N7M5_CLOK5 Length = 452 Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 67/239 (28%), Positives = 100/239 (41%), Gaps = 38/239 (15%) Query: 45 LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLL 104 LS +I++ +++AG+ G GGA F + +K S P D+ + + + N E EP D Sbjct: 119 LSDKDIMSIIREAGIVGMGGATFPSHVKLS-PPADK--KVEFFILNGAECEPYLTSDYRS 175 Query: 105 MEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTG 164 M + +V G+ I LKA +G++ + N + AI ++ K GTG Sbjct: 176 MLEYTDRIVSGVKIIMKILKAEQGFVGIED-------NKKDAIE------VMEKAFEGTG 222 Query: 165 FDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCN 224 V +Y G E LI L GR P + P GA V NV T Sbjct: 223 VQ----VVALPTKYPQGAEKMLIKVLTGREV-PSGR--LPMDVGA-----VVQNVGTCIA 270 Query: 225 VPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRD 283 V + G+ Q + T L G G +K P L GTT + + D GG ++ Sbjct: 271 VSDAVEKGIPLIQRV-------TTLSG--GALKEPKNLLLRIGTTFKYAV-DLCGGFKE 319 >UniRef50_Q52716 Electron transport complex protein rnfC n=9 Tax=Bacteria RepID=RNFC_RHOCA Length = 519 Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 38/192 (19%) Query: 14 TWRLRDDKQPVW---LDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTG 70 T +R D + W L R +N +P+EI QV AG+ G GGA F + Sbjct: 110 TITIRPDGEDKWGPHLPRLRPENA-----------APEEIAAQVAAAGIVGMGGATFPSA 158 Query: 71 LKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYI 130 +K +L K ++ L+ N E EP D LM + + +G+ I A AL + ++ Sbjct: 159 VKLNLRAK---YDLTTLIINGAECEPYLTCDDRLMRERAEEIADGIGIMARALGVKQVFV 215 Query: 131 FL---RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALI 187 + + + IEA RA+ G+ F+ +H +Y G E L+ Sbjct: 216 AIESNKPQAIEAMTRYNRAL----------------GYTFK--IHVVPTQYPMGSEKHLV 257 Query: 188 NSLEGRRANPRS 199 + G+ R+ Sbjct: 258 KMITGQETPARA 269 >UniRef50_C4Z9G3 RnfC/nqrF n=16 Tax=Bacteria RepID=C4Z9G3_EUBR3 Length = 443 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 77/253 (30%), Positives = 110/253 (43%), Gaps = 40/253 (15%) Query: 31 SKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCN 90 ++ YE +T LS +EI+ +VK+AG+ G GGAGF T +K S PK E I Y++ N Sbjct: 106 TETTYESVED-VTALSKEEIIEKVKNAGVVGMGGAGFPTHVKLS--PK-EPDKIEYIIAN 161 Query: 91 ADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEA 150 E EP D M + P L+ GM I +G + + N I + Sbjct: 162 CAECEPYLTSDYRRMLENPEELIGGMKIILQLFDNAKGILGIED-------NKPDCIEKL 214 Query: 151 TEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAW 210 TE T + + V +Y G E LI + GR N + PA +G Sbjct: 215 TEL---------TKDEPRIEVCPLMTKYPQGGERQLIYATTGRAINSKM---LPADAGCI 262 Query: 211 GKPTCVNNVETLCNVPAILANGVEWYQNISK-SKDAGTKLMGFSGRVKNPGLWELPFGTT 269 V+NVET+ V + NG + IS + DA VKNP GT+ Sbjct: 263 -----VDNVETIIAVYNAVKNGQPVLKRISTVTGDA----------VKNPSNILYSIGTS 307 Query: 270 AREILEDYAGGMR 282 +E++ D AGG + Sbjct: 308 YQELV-DAAGGFK 319 >UniRef50_A0L5G6 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L5G6_MAGSM Length = 605 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 66/259 (25%), Positives = 101/259 (38%), Gaps = 40/259 (15%) Query: 28 EYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYL 87 E R +G +G + L P +I + V+ AG+ G GGA F + +K S P E + L Sbjct: 111 EDRLIDGIQGCTDPFS-LEPAQIRDAVRHAGIVGLGGATFPSHVKLS--PPGEK-KVELL 166 Query: 88 LCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAI 147 + N E EP D LME+ L+V G+ I AL I + A ++RA+ Sbjct: 167 VLNGVECEPYLTCDARLMEERSGLIVTGVRIMLHALHCKEAVIGIEDNKPGAIAAMKRAV 226 Query: 148 AEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATS 207 KNI V Y G E LI L GR+ P+ Sbjct: 227 EGE-------KNI---------SVRVLPVMYPQGSEKQLIEVLTGRQ--------VPSGG 262 Query: 208 GAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKN-PGLWELPF 266 +N+ T + + +G+ + +++ +GR N P E Sbjct: 263 LPIDVGVVCHNIATAIAIKEAIVDGMPLLK----------RVVTVTGRAINRPANVECLL 312 Query: 267 GTTAREILEDYAGGMRDGL 285 GTT ++L+ GG R + Sbjct: 313 GTTVGDLLKQ-CGGSRSSM 330 >UniRef50_Q21I18 Serine/threonine protein kinase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21I18_SACD2 Length = 745 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 21/150 (14%) Query: 45 LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLL 104 L D +V +++ AG+ G GGAGF T +K + PK + +++ L+ N E EP D +L Sbjct: 122 LDHDRLVQKIRAAGIVGMGGAGFPTAIKVN--PKS-NKHVKTLIFNGTECEPYITADDML 178 Query: 105 MEQLPHLLVEGM-LISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGT 163 M + +V+G+ LI+ F + I + EA +++A Sbjct: 179 MRERADDIVKGVQLIARFMGEVEETLIGIEDNKPEAIAAMQKA---------------AE 223 Query: 164 GFDFELFVHTGAGRYICGEETALINSLEGR 193 G D E+ V +Y G E LI L G+ Sbjct: 224 GTDIEVVVFP--TKYPSGGEKQLIQILTGK 251 >UniRef50_D1AJ84 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AJ84_SEBTE Length = 444 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 77/300 (25%), Positives = 115/300 (38%), Gaps = 56/300 (18%) Query: 87 LLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRA 146 + N E EP D+ LM + + L++GM I A LKA R + L+ +Y L Sbjct: 33 FIVNGAECEPLLEVDKFLMREKTYELIKGMEIIAGNLKAARVVLGLKKKYKVEIKKLSET 92 Query: 147 IAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPAT 206 I E L N+ ELF+ Y G+E ++ + G+ PA Sbjct: 93 IKE------LDSNV-------ELFLMDNF--YPAGDEQIMVKDITGK--------SIPAG 129 Query: 207 SGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPF 266 T V+NV T+ NV Y+ I + K K + G V NP + E+P Sbjct: 130 GIPLDVDTVVSNVGTVINV----------YEAI-EEKPVTKKYVSVLGEVNNPVMLEVPI 178 Query: 267 GTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALA 326 GT+ E ++ AG G+K K + G H D E I G+ + Sbjct: 179 GTSFEECIKR-AG----GVKIKNYAVIEGGPMMGKIVHRDELAEKAVIKTTGA----LII 229 Query: 327 MAVDHEINMVSLVRNLEEFFARES---CGWCTPCRDGLPWSV--------KILRALERGE 375 + DH + + E ES C C C D P + +++RA+ GE Sbjct: 230 LPEDHYV--IKRKERPEAHILNESRAACIQCRMCTDMCPRYLIGHKLRPHRVMRAMGMGE 287 >UniRef50_A8AH10 Electron transport complex protein rnfC n=6 Tax=Gammaproteobacteria RepID=RNFC_CITK8 Length = 705 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 4/110 (3%) Query: 46 SPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLM 105 S +E++ ++ G+ G GGAGF TG+K + I L+ NA E EP D LM Sbjct: 131 SREELITRIHQFGVAGLGGAGFPTGVKL----QGGGDKIETLIINAAECEPYITADDRLM 186 Query: 106 EQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGL 155 + +VEG+ I A L+ I + +A LR +A+A + L Sbjct: 187 QDCAAQVVEGIRILAHILQPREVLIGIEDNKPQAISMLRAVLADAHDIAL 236 >UniRef50_Q65UM2 GltD protein n=9 Tax=Bacteria RepID=Q65UM2_MANSM Length = 612 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 1/75 (1%) Query: 349 ESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPL 408 ++CG C PCRDG+P +LR + GEG + + +L + G A+E L Sbjct: 50 QTCGKCVPCRDGIPHLSFLLRDILAGEGDDSTMRQIRELAEMIRDGSDCAIGYQPAIEIL 109 Query: 409 QSAIKYFREEFEAGI 423 S I+ F+EE+E+ I Sbjct: 110 DS-IEEFKEEYESHI 123 >UniRef50_Q0TQI8 Electron transport complex, RnfABCDGE type, C subunit n=8 Tax=Clostridium perfringens RepID=Q0TQI8_CLOP1 Length = 436 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 75/349 (21%), Positives = 126/349 (36%), Gaps = 58/349 (16%) Query: 45 LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLL 104 LS ++V VKD G+ G GGA F +K ++ E I+Y++ NA E EP D + Sbjct: 119 LSLKDVVKLVKDYGIVGLGGATFPCHVKLNV---KEDKEIKYIIINAAECEPYLTCDHRV 175 Query: 105 MEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTG 164 M + ++ G+ I YI + + A + + E Sbjct: 176 MLEYTEEIISGLRILLELFPKALIYIGIEDNKLNAIDKFKSILGE--------------- 220 Query: 165 FDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCN 224 D ++ V +Y G E LI +L + P K P + NV T+ Sbjct: 221 -DNKIKVMPLKSKYPQGSEKHLIYALTKLQV-PSGKLPLDIGCIVF-------NVSTIYQ 271 Query: 225 VPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDG 284 + A L NG+ + I + +++P + GT ++I+E G + Sbjct: 272 LYASLINGLPLTERI---------ITVTGDSIRSPKNLRVKIGTPVKDIIEFCGGFINKP 322 Query: 285 LKFKAWQPGGAGTDFLTEAHLDLPMEFESIG----------------KAGSRLGTALAMA 328 K P GT LDLP+ + G + G L + Sbjct: 323 NKIILGGP-MMGTAI---NSLDLPITKGTSGILCLSKVDDFPKSHCIRCGKCLNSCPMNL 378 Query: 329 VDHEINMVSLVRNLE--EFFARESCGWCTPCRDGLPWSVKILRALERGE 375 + ++N ++L L+ EF C C C P + I+ + + Sbjct: 379 IPQKLNELALKDKLDEFEFLGGMDCLECGCCTFSCPAKISIVNNIRNAK 427 >UniRef50_Q5LC48 Electron transport complex protein n=41 Tax=Bacteria RepID=Q5LC48_BACFN Length = 445 Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 61/238 (25%), Positives = 104/238 (43%), Gaps = 39/238 (16%) Query: 45 LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLL 104 L+ +EIV ++ DAG+ G GGA F T +K P S ++ NA E EP D L Sbjct: 121 LTSEEIVKKIADAGIVGLGGACFPTQVKLCPPP---SFKAECVIINAVECEPYLTADHQL 177 Query: 105 MEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTG 164 M + ++ G+ I A+K + +I + + A+ L +A ++ AG Sbjct: 178 MLEHAEEVMVGVAILMKAVKVNKAFIGIENNKPD-AIQLMTKVA-SSYAG---------- 225 Query: 165 FDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCN 224 + V +Y G E LI+++ R+ + P ++GA V NV T Sbjct: 226 ----IEVVPLKVKYPQGGEKQLIDAITKRQV---ASGALPISTGAV-----VQNVGTAFA 273 Query: 225 VPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGM 281 V YQ + K+K +++ +G+ V P + GT ++++ D GG+ Sbjct: 274 V----------YQAVQKNKPLFERVITVTGKSVAQPSNFLARIGTPMQQLI-DACGGL 320 >UniRef50_D1Y5V9 Electron transport complex protein RnfC n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y5V9_9BACT Length = 447 Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 55/239 (23%), Positives = 101/239 (42%), Gaps = 37/239 (15%) Query: 47 PDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLME 106 P E + ++++AG+ G GGA F +K++ P+D+ I++ + N E EP D LM Sbjct: 122 PKEYLKRIREAGIVGFGGATFPAAVKFAPPPQDK---IKWFIVNGAECEPYLNCDFRLMM 178 Query: 107 QLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFD 166 + +V+G + G I + EA L ++A LG Sbjct: 179 ESTDEIVKGTALLLRLFPEAEGVIAVENNKPEAIAALSGSVAR------LGVQ------- 225 Query: 167 FELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVP 226 + V +Y G E LI +L G+ + PA G + NV T+ Sbjct: 226 -NVRVQPLTVKYPQGSEKMLIEALTGQEYVVTA---LPADVGCI-----IANVRTV---- 272 Query: 227 AILANGVEWYQNISKSKDAGTKLMGFSG-RVKNPGLWELPFGTTAREILEDYAGGMRDG 284 + ++ I+ + + +++ +G + P +P GT+ RE++ D+ GG ++ Sbjct: 273 ------QQCWRAIALGEPSTERVVTVTGDAIAEPKNVCIPLGTSIRELV-DFCGGFKEA 324 >UniRef50_Q31GU4 NADH oxidoreductase, RnfABCDGE type, C subunit n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31GU4_THICR Length = 704 Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 4/78 (5%) Query: 46 SPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLM 105 +PD++ V AG+ G GGAGF T K P I+YLL N E EP D +LM Sbjct: 148 TPDKLKALVHKAGIVGMGGAGFPTFAKIPSQPG----QIKYLLINGAECEPFITCDDMLM 203 Query: 106 EQLPHLLVEGMLISAFAL 123 + +V+G +I A +L Sbjct: 204 QTRAEDIVQGAMIVAQSL 221 >UniRef50_B2A142 Electron transport complex, RnfABCDGE type, C subunit n=3 Tax=Clostridia RepID=B2A142_NATTJ Length = 441 Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 58/243 (23%), Positives = 95/243 (39%), Gaps = 39/243 (16%) Query: 45 LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLL 104 ++ DEI +V AG+ G GGA F T +K S D+ I ++ N E EP D + Sbjct: 120 ITADEIKEKVNAAGIIGMGGAAFPTHIKIS---PDKEKPIDTVILNGAECEPYLTTDYRM 176 Query: 105 MEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTG 164 M + ++ G+ A+ G I + +A ++ +A+ Sbjct: 177 MLEAEDYVLFGLRAIMKAVNCENGVIAIENNKPQAIEKMQNIVAD--------------- 221 Query: 165 FDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCN 224 D L V +Y G E LI ++ GR P+ VNNV T Sbjct: 222 -DDRLQVMIFESKYPQGAEKQLIKTVTGRE--------VPSGGLPMDVGCIVNNVGT--- 269 Query: 225 VPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRD 283 V + I +K + ++M +G + PG + + GT A I+ + GG ++ Sbjct: 270 -------AVAIAEAIKLNKPSYERVMTVTGPGINRPGNFLVRIGTLASHIISE-CGGAKE 321 Query: 284 GLK 286 K Sbjct: 322 NTK 324 >UniRef50_A0AHN6 Complete genome n=18 Tax=Listeria RepID=A0AHN6_LISW6 Length = 454 Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 78/321 (24%), Positives = 117/321 (36%), Gaps = 54/321 (16%) Query: 45 LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLL 104 +S I+ ++KDAG+ G GGAGF T K+ S + YL+ NA E EP D + Sbjct: 1 MSQMSILEKIKDAGVVGCGGAGFPTHAKF-------SGEVEYLIINAAECEPLLKTDHFV 53 Query: 105 MEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTG 164 M ++ + + + A I + Y E LR AI E Sbjct: 54 MRNHAVETIKAIEMVKSQVGAEFAVIATKRYYTEEIAALRLAITE--------------- 98 Query: 165 FDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCN 224 + + +H Y G+E ++ + GR P P G V+NV T+ N Sbjct: 99 LNASVTIHEMDNVYPTGDEQVMVFEVTGRVVPPSG---IPLMVGCI-----VSNVSTMWN 150 Query: 225 VPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDG 284 V Y I K + +G V P L ++P GT L G D Sbjct: 151 V----------YHAIQDDAPVVRKQLTVTGAVNEPKLLDVPIGTPFEVCLAAAGGTNLDE 200 Query: 285 LKFKAWQP-GGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLE 343 F P G D T A + + K S L H+++ + +E Sbjct: 201 YLFLDGGPMMGKLNDQSTIAE-------KVVTKTTSGLIVTEDTGYLHKLHY----QTVE 249 Query: 344 EFF--ARESCGWCTPCRDGLP 362 + F + +C C+ C D P Sbjct: 250 QIFNETKSACIQCSLCSDLCP 270 >UniRef50_A1WTR7 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Halorhodospira halophila SL1 RepID=A1WTR7_HALHL Length = 506 Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 65/239 (27%), Positives = 93/239 (38%), Gaps = 39/239 (16%) Query: 45 LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLL 104 + P I +V +AG+ G GGA F +K + L+ N E EP D L Sbjct: 127 IDPATIAARVGEAGIVGMGGAAFPAAVKLG-----AGQPVATLILNGGECEPYLTCDDRL 181 Query: 105 MEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTG 164 M + +++G + A AL A R I + EA LRRA L G +++ Sbjct: 182 MRERAAGIIDGAQLMARALGAERTAIGVEDNKPEAIHALRRA-----SDALGGPDVVPV- 235 Query: 165 FDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCN 224 + G E LI +L GR PA + A V+NV T Sbjct: 236 ----------PSLWPQGSEKHLIYTLTGRE--------VPAGARAGDIGVVVHNVGTAYA 277 Query: 225 VPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRD 283 V +G IS+ G G V PG +E P G + ++E AGG+R+ Sbjct: 278 VHRAARHGRPL---ISRPVTVG------GGAVAEPGNFEAPLGLPLQALIEQ-AGGLRE 326 >UniRef50_A0LLS5 Electron transport complex, RnfABCDGE type, C subunit n=3 Tax=Deltaproteobacteria RepID=A0LLS5_SYNFM Length = 440 Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 68/242 (28%), Positives = 101/242 (41%), Gaps = 35/242 (14%) Query: 45 LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLL 104 SP+E++ ++++AGL G GGAGF T LK S P + L+ NA E EP D Sbjct: 121 FSPEELLEKIRNAGLVGLGGAGFPTHLKLSPPP---GTRLDKLILNAAECEPYLNCDNRT 177 Query: 105 MEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTG 164 M + PH ++ G I L +I + EA L RA AE+T Sbjct: 178 MIEFPHEILTGARIILRILGIKECHIGIENNKQEAIWVLSRAAAESTAP----------- 226 Query: 165 FDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCN 224 D ++ V+ +Y G E LI ++ GRR P+P G V NV T Sbjct: 227 -DCKISVNPLMVKYPQGSEKQLIQTITGRRV------PYPGLPFDVG--VMVINVGTAKT 277 Query: 225 VPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRD 283 + + + K +++ SGR + P + GT +I+ + GG D Sbjct: 278 I----------HDAVVLEKPLYERVVTISGRAIARPANLMVRIGTRLSDIV-TFLGGTMD 326 Query: 284 GL 285 L Sbjct: 327 NL 328 >UniRef50_B8J118 FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J118_DESDA Length = 618 Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 35/58 (60%) Query: 330 DHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQL 387 D ++++ ++R E A ESCG C PCR GL + L +L RG+ +P D E L++L Sbjct: 29 DETVDVLDMLRAYYEGAAAESCGQCFPCRSGLKRIAERLDSLCRGKARPDDREYLQEL 86 >UniRef50_A5N6H2 RnfC related NADH dehydrogenase n=2 Tax=Clostridium kluyveri RepID=A5N6H2_CLOK5 Length = 442 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 63/232 (27%), Positives = 96/232 (41%), Gaps = 41/232 (17%) Query: 49 EIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQL 108 +++ +VKDAG+ G GGAGF T +K + ++Y + NA E EP D+ LM Sbjct: 2 DLLKKVKDAGIIGAGGAGFPTHVKL-------NTKVKYFIVNALECEPLLQSDKYLMRNH 54 Query: 109 PHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFE 168 +V I +L A + I L+ Y E L +I E Sbjct: 55 SDEIVGATEIIGKSLGAEKIVIGLKNVYY-------------NEIDALTNSIKKLNSSVE 101 Query: 169 LFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAI 228 LF++ Y G+E L+ + G+ P + P+T GA V+NV T+ NV Sbjct: 102 LFLNRSF--YPAGDEQILVYEVTGKTIAPGA---IPSTVGAV-----VSNVGTVFNVFEA 151 Query: 229 LANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGG 280 L K + K + G V +P + ++P GT E +E G Sbjct: 152 L-----------KDEPVTYKYVTVVGEVASPAIVKVPIGTKVTECIEKCGGA 192 >UniRef50_A4SEA3 Electron transport complex, RnfABCDGE type, C subunit n=6 Tax=Chlorobiaceae RepID=A4SEA3_PROVI Length = 441 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 5/84 (5%) Query: 44 GLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRL 103 GLS + I+ ++KDAG+ G GGAGF + +K S P D++++ ++ N E EP D Sbjct: 118 GLSKESIIERIKDAGIVGMGGAGFPSSVKLS-PPPDKTID--TIILNGAECEPFLTADHR 174 Query: 104 LMEQLPHLLVEGM--LISAFALKA 125 +M + +++G+ + S F KA Sbjct: 175 VMVEYAEEVIKGLEIITSLFQGKA 198 >UniRef50_B2TM76 Periplasmic [Fe] hydrogenase 1 n=14 Tax=Bacteria RepID=B2TM76_CLOBB Length = 646 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 5/72 (6%) Query: 250 MGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPM 309 + G++ NPG+ E+P G T R+ILE GG+ + FKA Q G FL E LD Sbjct: 36 IAICGKINNPGIIEVPVGATLRDILE-LCGGVVNNSSFKAAQIGIPFGGFLNEGSLDKEF 94 Query: 310 EF----ESIGKA 317 F E+I +A Sbjct: 95 NFGLFYENISRA 106 >UniRef50_C7RDT7 Electron transport complex, RnfABCDGE type, C subunit n=2 Tax=Anaerococcus RepID=C7RDT7_ANAPD Length = 439 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 64/269 (23%), Positives = 114/269 (42%), Gaps = 35/269 (13%) Query: 20 DKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKD 79 + + V +D E K L+ +EIV ++K+AG+ G GGA F +K+ +P Sbjct: 93 NAKAVVIDTEGFDQDKEYIEKDNVDLNAEEIVAKIKEAGIVGMGGAAFPAHIKY--LP-- 148 Query: 80 ESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEA 139 + + ++ N E EP D LM+ P +++ + + A+ A +G I + +A Sbjct: 149 -AKPVDTVIVNGAECEPYITCDDYLMKNRPERILKALNQAMKAVGAKKGIIAIEDNKPKA 207 Query: 140 AVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRS 199 + A+ + + + FD E + +Y G+E +I+ R+ Sbjct: 208 FDTMVSALEKFAKE--------NSSFDIE--IKKLQTKYPQGDEKRIIDVCLNRQVPSGG 257 Query: 200 KPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKN 258 P GA V+NV T+ N + Y+ I K +++ +G+ VKN Sbjct: 258 ---LPMDVGAI-----VSNVSTM--------NAI--YEAIYMDKPLYERIVTVTGKSVKN 299 Query: 259 PGLWELPFGTTAREILEDYAGGMRDGLKF 287 P + GT ++E+ AGG D K Sbjct: 300 PTNMLVRCGTEFGYLIEE-AGGADDIAKL 327 >UniRef50_Q65U33 Electron transport complex protein rnfC n=29 Tax=Pasteurellaceae RepID=RNFC_MANSM Length = 723 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 91/396 (22%), Positives = 147/396 (37%), Gaps = 76/396 (19%) Query: 27 DEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRY 86 D++R +N + S ++++ ++ AG+ G GGA F T K K ++ Sbjct: 117 DQWREQNPIDD----FLSQSAEQLIEKIYQAGIAGLGGAVFPTAAKIDSAQK----KVKL 168 Query: 87 LLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRA 146 L+ N E EP D LM P ++EG+ I + L+ + I + EA +++ A Sbjct: 169 LIINGAECEPYITCDDRLMRDNPDEIIEGIRILRYILRPEKVVIAVEDNKPEAVQSIKNA 228 Query: 147 IAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPAT 206 L G N D E+ V +Y G LI L G PA Sbjct: 229 --------LQGAN------DIEIRVI--PTKYPSGAAKQLIQILTGME--------VPAG 264 Query: 207 SGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPF 266 + + NV T + + N + + L G ++ N G + F Sbjct: 265 QRSSSIGVLMQNVGTAFAIKRAIINDEPLIERV-------VTLTG--DKIPNKGNQWVRF 315 Query: 267 GTTAREILEDYAGGMRDGLKFKAWQPGGAGTDF--LTEAHLDLPMEFESIGKAGSRLGTA 324 GT +L++ G ++ P G LT +LD P+ ++LG Sbjct: 316 GTPISFLLKNV------GYQYDERLPVFLGGPMMGLTLPNLDAPI---------TKLGNC 360 Query: 325 LAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSV--KILRALERGEGQPGDIE 382 + +A DH + +SC C+ C D P + + L R E E Sbjct: 361 I-LAPDH--------FEYDPQAREQSCIRCSACSDACPVHLMPQQLYWYARSEDHEKSEE 411 Query: 383 TLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREE 418 + C G CA+ + PL I+YFR+E Sbjct: 412 YSLKDCIECG----LCAYVCPSHIPL---IQYFRQE 440 >UniRef50_C6QID3 Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QID3_9RHIZ Length = 386 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 57/224 (25%), Positives = 85/224 (37%), Gaps = 27/224 (12%) Query: 92 DEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEAT 151 DE PG + Q P ++EG+LI A AL A + + A + Sbjct: 161 DEHGPGEMAQSFFLAQFPQRVLEGLLIVAHALGAPEIVLCYSRRHESACRKFYKEFLFLK 220 Query: 152 EAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWG 211 G LG N+ T D E + R IC NS E P+ S Sbjct: 221 NRG-LGANVRFTLIDAESQSEQQSLRQICLTS----NSEE------------PSASALIA 263 Query: 212 KPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAR 271 P E + VP I+A G + + L+G V PG+++ P +T Sbjct: 264 DP------EFVAWVPEIVATGDALDGDAASGPQTLYALLGC---VSRPGIYKAPVFSTVH 314 Query: 272 EILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIG 315 E++ AGG+R G ++ PG L H +L ++ E +G Sbjct: 315 ELIA-LAGGIRAGESLHSFVPGDWDRVALPAHHSNLRVDAEILG 357 >UniRef50_B5JR42 Electron transport complex, RnfABCDGE type, C subunit subfamily n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JR42_9BACT Length = 456 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/100 (35%), Positives = 47/100 (47%), Gaps = 3/100 (3%) Query: 45 LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLL 104 +S EIV V++ GL G GGA F T +K + PKD + +L N E EP D + Sbjct: 133 MSQQEIVKAVQETGLVGLGGAAFPTHVKLT-PPKDH--KVHTVLINGCECEPFLTTDHRV 189 Query: 105 MEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLR 144 M + LV G I AL A R I ++A +R Sbjct: 190 MLEQAEDLVAGTRIFMKALNAERAIIGTENNKLDAVEAIR 229 >UniRef50_D0D1S7 EleCtron transport complex, rnfabcdge type, c subunit n=1 Tax=Citreicella sp. SE45 RepID=D0D1S7_9RHOB Length = 476 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 5/100 (5%) Query: 47 PDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPG-TYKDRLLM 105 P EI +V +AG+ G GGA F +K +L + + L+ NA E EP T DR L Sbjct: 166 PAEIAARVAEAGIVGMGGATFPAAVKLNLR---DRYALHTLIINAAECEPYLTCDDRHLR 222 Query: 106 EQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRR 145 E+ + +G I A AL R + + G+ EAA +RR Sbjct: 223 ERAEE-VADGAGIMARALGVARIIVAIEGDKPEAAAAMRR 261 >UniRef50_C9LBM9 Na(+)-translocating NADH-quinone reductase, A subunit n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LBM9_RUMHA Length = 449 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 70/241 (29%), Positives = 103/241 (42%), Gaps = 39/241 (16%) Query: 35 YEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEM 94 YE + + +EI+ ++D GL G GGAGF T K+ + I LL NA E Sbjct: 115 YESKLVDIENFTKEEIIAGIRDGGLTGMGGAGFPTHKKY-----ETDKKIDALLINAAEC 169 Query: 95 EPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAG 154 EP D LM + + + G+ + A A + Y+ + EA A Sbjct: 170 EPFLTCDYRLMLEYSYAVANGIRLLLKASGAPKAYLCMEDNKPEA-------------AK 216 Query: 155 LLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPT 214 +LGK I+ D E V +Y G E LI ++ GR P PA +GA Sbjct: 217 VLGK-ILENTKDIE--VKVLPTQYPQGGERQLIQAVLGREV-PMGG--LPAEAGAI---- 266 Query: 215 CVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREIL 274 V+NV T +L + I + +G VKNPG + +P GT+A+E++ Sbjct: 267 -VSNVGTAKATADMLLGKTPLIRRI----------VTVTGCVKNPGNYLVPIGTSAKELV 315 Query: 275 E 275 E Sbjct: 316 E 316 >UniRef50_A5EVI2 Electron transport complex protein, C subunit n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EVI2_DICNV Length = 535 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 7/105 (6%) Query: 48 DEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQ 107 +++ +V D G+ G GGAGF T K +L K +L+ NA E EP D + + + Sbjct: 134 EQLRARVSDCGVVGLGGAGFPTARKLALAAK-------HLVINAAECEPYISCDDMQIRE 186 Query: 108 LPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATE 152 +V G +SA+ L + + +A L +AIA+A + Sbjct: 187 HAAQIVRGAQLSAYILSVDSIRFGIENDKPQAIAALEKAIADAAD 231 >UniRef50_A1HS10 FAD dependent oxidoreductase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HS10_9FIRM Length = 666 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 44/170 (25%), Positives = 71/170 (41%), Gaps = 13/170 (7%) Query: 254 GRVKNPGLWELPFGTTAREILEDYAGGM-RDGLKFKAWQPGGAGTDFLTEAHLDLPM-EF 311 G+V+ PG + + G +I+ YAGGM + KA GGA F+ EA L P+ + Sbjct: 14 GQVRQPGTYSVQPGHNLLDIVFSYAGGMATNRFLLKAVLVGGAAGHFVGEAELKQPVSQS 73 Query: 312 ESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRAL 371 + I + + N V+L+ + C C + +VK+L L Sbjct: 74 QEIMVFDEGSCLVNVVRLLLVYNRVTLLSTRD--------AGCQVCTAAVAEAVKLLERL 125 Query: 372 ERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEA 421 G D+ +L R G C A+ PL++A+ + +EF A Sbjct: 126 TTSVGTARDVA---ELARIAGSQNPDCPSRCAALRPLKTAMALWSDEFAA 172 >UniRef50_Q0AAG9 Electron transport complex, RnfABCDGE type, C subunit n=2 Tax=Chromatiales RepID=Q0AAG9_ALHEH Length = 515 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 64/257 (24%), Positives = 101/257 (39%), Gaps = 33/257 (12%) Query: 53 QVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLL 112 +V++AG+ G GGA F T +K L P +++ L+ N E + D LM + P + Sbjct: 131 RVREAGIVGLGGAAFPTAIK--LNPPSDTLP-DTLIANGVECDTHITCDDRLMRERPEQI 187 Query: 113 VEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVH 172 ++G+ +A L R I + G+ EAA +GL + V Sbjct: 188 LDGVATAADMLNVVRIRIAVEGDKPEAARA---LRDALAASGLADDG------RRDWAVV 238 Query: 173 TGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANG 232 RY G E LI++L GRR P+ +NV T + + +G Sbjct: 239 DVPKRYPAGSERQLIHNLTGRR--------VPSDGLPKDVGVITSNVGTFAAIHRAIRHG 290 Query: 233 VEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQP 292 + I G V+ P E GT E++ D+ GG DG+ Sbjct: 291 EPLIRRIVTITGDG---------VRRPANVEARIGTPMAELI-DHCGGYHDGVYQLVMGG 340 Query: 293 GGAGTDFLTEAHLDLPM 309 GT L++ D+P+ Sbjct: 341 SLMGTALLSD---DVPL 354 >UniRef50_A5I4Q9 NADH dehydrogenase family protein n=7 Tax=Clostridium botulinum RepID=A5I4Q9_CLOBH Length = 372 Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust. Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 43/236 (18%) Query: 48 DEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQ 107 D +V+ V +AG+ G GGAGF T +K KD Y++ N E EP + + ++E+ Sbjct: 78 DNLVDTVFEAGIVGAGGAGFPTHIKLKADNKD-----GYIIANCVECEPALHHNMKVIEE 132 Query: 108 LPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDF 167 P L++ G+ + A + +GYI ++ ++ +A L A+ KN+ + + Sbjct: 133 TPELIINGIKYAMKATNSKKGYIAIKSKHEKAVRVLEEAL----------KNV--SDIEI 180 Query: 168 ELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPA 227 +L Y GEE A+IN++ + + P V N ETL N+ Sbjct: 181 KLL----KDLYPMGEERAIINAIFDKWLDVTELP--------IAAKCIVMNAETLANITR 228 Query: 228 ILANGVEWYQNISKSKDAGTKLMGFSGRVKN---PGLW-ELPFGTTAREILEDYAG 279 + G K K + G++K+ P ++ ++P GT ++++E G Sbjct: 229 AVEEG----------KPVIDKDITVIGKLKSGNKPNVFLQVPVGTPVKDLIEKSGG 274 >UniRef50_UPI0001BC56BC hydrogenase, Fe-only n=3 Tax=Fusobacterium RepID=UPI0001BC56BC Length = 652 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 45/72 (62%), Gaps = 2/72 (2%) Query: 240 SKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDF 299 +++ + G K++ +GRV+ PG+ E+ G T ++++ GG+++ +FKA Q G F Sbjct: 27 TQTVETGKKVI-IAGRVEKPGVVEIEDGMTLQDVI-TAVGGIKNKKQFKAAQFGIPFGGF 84 Query: 300 LTEAHLDLPMEF 311 LT HL+ P++F Sbjct: 85 LTSKHLEHPIDF 96 >UniRef50_C6WYE0 Electron transport complex, RnfABCDGE type, C subunit n=2 Tax=Betaproteobacteria RepID=C6WYE0_METML Length = 637 Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%) Query: 48 DEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQ 107 +E++ ++ +G+ G GGA F T +K KD + I L+ NA E EP D +LM + Sbjct: 143 NELITSLRTSGIVGLGGATFPTHIKLR---KDGASAIHTLIINAAECEPYITCDDMLMRE 199 Query: 108 LPHLLVEGMLISAFALKA 125 +++G+ I+ L+A Sbjct: 200 RADEIIQGIAIAQHLLRA 217 >UniRef50_UPI0001698869 electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698869 Length = 285 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 38/157 (24%), Positives = 66/157 (42%), Gaps = 19/157 (12%) Query: 37 GARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEP 96 G+ + + LSP +++ V+++G+ G GGA F + +K ++ E + L+ N E EP Sbjct: 43 GSERDIGALSPQQLIQAVQESGMVGLGGAAFPSHVKLTI---PEGKQVDTLVVNGCECEP 99 Query: 97 GTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLL 156 D +M + P L+ G+ + A + I + ++A L+ Sbjct: 100 YLSCDHRVMLEHPKALMRGIRYAMRATGTKQAVIGIEDNKMDAVEQLQ------------ 147 Query: 157 GKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGR 193 T D + V +Y G E LI S GR Sbjct: 148 ----THTPRDDTIKVVAVETKYPQGSEKMLIKSALGR 180 >UniRef50_C8WMP9 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WMP9_EGGLE Length = 442 Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust. Identities = 95/414 (22%), Positives = 158/414 (38%), Gaps = 80/414 (19%) Query: 22 QPVWLDEYRSKNGY----EGARKALTGLSPDEIVNQ------VKDAGLKGRGGAGFSTGL 71 QPV+ ++ +GA+ ++P E+ +Q +K +GL G GGAGF T + Sbjct: 89 QPVFYSTGKTDTTVIIESDGAQTVADTVAPPEVTDQASFLAAIKKSGLVGLGGAGFPTDI 148 Query: 72 KWSLMPKDESMNIRYLLCNADEMEPGTYKD-RLLMEQLPHLLVEGMLISAFALKAYRGYI 130 K + P E +++ Y++ NA E EP D R +ME +L F ++ ++ Sbjct: 149 KLA-PPNLEEIDL-YVV-NATECEPYLSTDYREMMESPDDVL--------FGIRETCRHL 197 Query: 131 FLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSL 190 + I N +AI E T D + V RY G E L+++ Sbjct: 198 GIPNAMICIESNKPKAIELMREL---------TKDDSSIQVKALPSRYPQGAENVLVHNA 248 Query: 191 EGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQ-NISKSKDAGTKL 249 GR PR K G +NNV T+ ++ L G+ + + S DA Sbjct: 249 TGRVV-PRGK--RQTDVGVM-----LNNVTTMASIGRFLKTGMPLVKRRFTVSGDA---- 296 Query: 250 MGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQP--GGAGTDFLTEAHLDL 307 + P + GT R+++E +AG ++ K P G A D +D Sbjct: 297 ------IARPCNANIIIGTRLRDVME-FAGLTKEPHKVVLGGPMMGNAQID------MDY 343 Query: 308 PMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKI 367 P+ ++ G ++ ++ E A +C C C + P + Sbjct: 344 PVIRQNNG-------------------VLVFSKDAMEQPATTACIRCGRCTNSCPMQLSP 384 Query: 368 LRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEA 421 + + Q D + L+ L L G C+ A +PL K R+ A Sbjct: 385 IAIKKAYTVQ--DAKKLDDLMADLCMGCGTCSFVCPAKQPLAQTSKLARDFMRA 436 >UniRef50_C5BT99 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BT99_TERTT Length = 505 Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 11/113 (9%) Query: 20 DKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKD 79 D + W+D S + Y+ P + N+V +AG+ G GGA F +K + Sbjct: 109 DGEDRWIDTGVSGDPYDE--------EPLTLANRVANAGIVGMGGAIFPAAVKLKQGTRH 160 Query: 80 ESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 E I+ +L N E EP D LM + +VEG + L+AY+ I + Sbjct: 161 E---IKTVLVNGSECEPFLTCDDRLMREKAEEIVEGARLIRHILRAYKAVIAI 210 >UniRef50_B8FDM6 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=4 Tax=Deltaproteobacteria RepID=B8FDM6_DESAA Length = 448 Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust. Identities = 66/280 (23%), Positives = 114/280 (40%), Gaps = 48/280 (17%) Query: 87 LLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRA 146 +L N EP D LME +++G+ + A+ A +G I ++ ++ A L + Sbjct: 35 VLINGASCEPLLCSDIHLMETRSDDIIKGLGLVMDAVGAEKGMIGIKAKHQNAVAILEQK 94 Query: 147 IAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPAT 206 +A+A G G+NI + F + F Y G+E L+N GR P+ P Sbjct: 95 VADAGLTG--GRNI--SVFKMKDF-------YPGGDEHVLVNEATGRIV-PQGGIPLEVG 142 Query: 207 SGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPF 266 V+N E++ N+ + + K + + +G V P + +P Sbjct: 143 -------VVVSNSESVFNMSQAMED-----------KPVTHRTLNVAGEVMKPIVVRVPV 184 Query: 267 GTTAREILEDYAGGMRDGLKFKAWQPGGAGTD--FLTEAHLDLPMEFESIGKAGSRLGTA 324 GT +L+ AGG+R +P G D + LD P E + K S L Sbjct: 185 GTPVSHVLK-LAGGVR--------RPDGKVIDGGPMMGRVLDDP-EKAFVTKTTSGL--- 231 Query: 325 LAMAVDHEINMVSLVRNLEEFF--ARESCGWCTPCRDGLP 362 + + +H + + V ++ + R +C C+ C D P Sbjct: 232 IVLPAEHNV-IRGKVTDINQLMRVTRLACCQCSLCTDLCP 270 >UniRef50_C6LEW4 PduS protein n=3 Tax=Bacteria RepID=C6LEW4_9FIRM Length = 449 Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust. Identities = 64/237 (27%), Positives = 96/237 (40%), Gaps = 50/237 (21%) Query: 50 IVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLP 109 ++ VK AG+ G GGAGF T +K + + Y + NA E EP D+ L Sbjct: 3 LIETVKAAGVVGAGGAGFPTHVKL-------NTKVEYFIVNAAECEPLIETDKYLCRTWA 55 Query: 110 HLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFEL 169 +V + + A L A + I L+ +Y L++A+ G D E+ Sbjct: 56 ERIVRTIPVIADFLGASKKVIALKAKYEREIAALKQAVETC-------------GSDVEI 102 Query: 170 FVHTGAGR-YICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAI 228 F G G Y G+E LI + GR R P+ G V+NV T+ N+ Sbjct: 103 F---GLGYFYPAGDEQTLIQQVTGRSVPERG---LPSDVGCV-----VDNVGTVLNI--- 148 Query: 229 LANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGT-------TAREILEDYA 278 A+ +E K K + G V+ L +P GT A+ ++ DYA Sbjct: 149 -ADALE-------GKPVTEKYLSVVGEVRQTLLLRVPVGTPVLECVKEAQPLISDYA 197 >UniRef50_Q0VP39 Electron transport complex protein rnfC n=12 Tax=Gammaproteobacteria RepID=Q0VP39_ALCBS Length = 991 Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust. Identities = 64/233 (27%), Positives = 93/233 (39%), Gaps = 37/233 (15%) Query: 42 LTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKD 101 T SP E+V+ ++ AG+ G GGAGF T +K +L + + L+ NA E EP D Sbjct: 148 FTEKSPAELVDIIRHAGIAGMGGAGFPTSIKVNL---GDHQRVEQLIINAVECEPYITAD 204 Query: 102 RLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIM 161 LM + +V G+ I + L R I + EA ++RA Sbjct: 205 DRLMRERAEQIVTGIHILQYLLNPRRTLIGIEDNKPEAISAIKRAC-------------- 250 Query: 162 GTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVET 221 G D E+ V +Y G E LI L G+ + PA G NV T Sbjct: 251 -KGCDIEVRV--VPTKYPSGGEKQLIQLLTGKEV---ASGQLPAQVG-----VVCQNVGT 299 Query: 222 LCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREIL 274 + + +G + T L G V PG +E+ GT R++L Sbjct: 300 AYAIKRAVCDGEPLISRV-------TTLTGDG--VSQPGNYEVLLGTPVRDLL 343 >UniRef50_C4L9H6 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9H6_TOLAT Length = 483 Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust. Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 8/87 (9%) Query: 24 VWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMN 83 + +D +N +A LS +E++N V++AG+ G GGA F T K L SM+ Sbjct: 92 IKVDVQNPRNNAGNTARANNTLSREEMINLVEEAGIVGMGGAMFPTSDKLRL-----SMH 146 Query: 84 --IRYLLCNADEMEPG-TYKDRLLMEQ 107 I L+ N E EP T DRL+ EQ Sbjct: 147 YLIDTLIINGSECEPYLTCDDRLMQEQ 173 >UniRef50_C9N0M8 Electron transport complex, RnfABCDGE type, C subunit n=2 Tax=Leptotrichia RepID=C9N0M8_9FUSO Length = 464 Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust. Identities = 58/235 (24%), Positives = 93/235 (39%), Gaps = 38/235 (16%) Query: 42 LTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKD 101 L + +EI + +K+AG+ G GGA F T +K+ + + + L+ N E EP D Sbjct: 146 LKLIKKEEIFSIIKEAGIVGLGGAQFPTHVKYDIKFR----KVDTLIINGAECEPYLTSD 201 Query: 102 RLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIM 161 +M+ ++ G+ + L I + E R + E E M Sbjct: 202 YSVMKNHTKEIINGLKVIQKLLNPKEVVIGIEEE--------NRELVEVIEE-------M 246 Query: 162 GTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVET 221 G F++ V Y G E LIN++ G + K P G V+NV T Sbjct: 247 GRKEKFQIKVKLLPTIYPQGSELQLINTVTGIKV---RKGELPLEKGV-----VVSNVST 298 Query: 222 LCNVPAILANGVEWYQNISKSKDAGTKLMGFSG-RVKNPGLWELPFGTTAREILE 275 V AI Y + K +++ SG +N G + + FGT I++ Sbjct: 299 ---VKAI-------YDAFFEGKPLIERVVTISGEEARNIGNYRIKFGTPLYHIVK 343 >UniRef50_C0R202 Electron transport complex protein n=2 Tax=Brachyspira RepID=C0R202_BRAHW Length = 435 Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust. Identities = 61/237 (25%), Positives = 95/237 (40%), Gaps = 40/237 (16%) Query: 45 LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLL 104 +S +E+ +++ AG+ G GGA F T +K K N L+ N E EP D L Sbjct: 120 MSAEEMSKKIQQAGIVGMGGATFPTHVKVDGAAKG---NADTLIINGVECEPYITSDYRL 176 Query: 105 MEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTG 164 M + L +G+ I + + + I I N +AI E + G Sbjct: 177 MIEYAQDLFKGIDILRKIVPSVKRTI------IGIENNKPKAIEEMAK----------IG 220 Query: 165 FDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCN 224 + + V RY G E LI + GR P SK P V N+ TL Sbjct: 221 KEHNVEVMALRLRYPQGAEKMLIEATTGRIV-PVSKLPMDVG-------VIVVNIATLYA 272 Query: 225 VPAILANGVEWYQNISKSKDAGTKLMGFSGRV--KNPGLWELPFGTTAREILEDYAG 279 + Y+ ++K+K +L+ SG ++ +W LP GT ++E+ G Sbjct: 273 I----------YEAVAKNKPLMERLVTISGDAIKEHKNVW-LPLGTPISHVVEECGG 318 >UniRef50_D0L1N5 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L1N5_HALNC Length = 567 Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 60/146 (41%), Gaps = 20/146 (13%) Query: 45 LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLL 104 +SP ++ ++++AG+ G GGA F T K + +R L+ N E EP D L Sbjct: 131 ISPAQLRGRLREAGIVGLGGAVFPTASKMAT----GQAAVRTLILNGAECEPYITCDDRL 186 Query: 105 MEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTG 164 M + P ++ G I+ + A R I + EA L+ A + Sbjct: 187 MREQPAEILRGAAIAMHMIGAERCLIGIEDNKPEALAALQSA----------------SR 230 Query: 165 FDFELFVHTGAGRYICGEETALINSL 190 D V++ RY G E LI L Sbjct: 231 SDPRFEVYSVPTRYPAGGEKQLIKVL 256 >UniRef50_B7CAH2 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAH2_9FIRM Length = 436 Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 7/104 (6%) Query: 48 DEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKD-RLLME 106 +E V+ VK+AG+ G GGAGF T +K+ M D + Y+L NA E EP D R +M+ Sbjct: 128 EECVDFVKNAGIVGLGGAGFPTYVKY--MKPD---GVDYVLINAVECEPYITADYRSVMD 182 Query: 107 QLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEA 150 L+ ++ A +A YI ++ + + ++ A+ +A Sbjct: 183 DAQDLVTGAKIMKKMA-EAKTVYICIKESHPDLIEKVKSALQDA 225 >UniRef50_A9BJD0 Electron transport complex, RnfABCDGE type, C subunit n=15 Tax=Bacteria RepID=A9BJD0_PETMO Length = 440 Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust. Identities = 65/265 (24%), Positives = 104/265 (39%), Gaps = 43/265 (16%) Query: 45 LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLL 104 S +E++N VK AG+ G GGA F + +K S+ + YL+ N E EP D ++ Sbjct: 120 FSKEELINIVKKAGIVGLGGAMFPSHVKLSI---PAGKKVDYLIINGAECEPYITVDDMM 176 Query: 105 MEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIA-EATEAGLLGKNIMGT 163 M +++G+ I + + + Y+ + EA ++ A+ E E +L Sbjct: 177 MRTYTEEIIKGIKIIEYIVNPGKIYVGIEENKPEAIKAMKNALKNENIEVAIL------- 229 Query: 164 GFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLC 223 +Y G E LI S+ R P +GA V N+ T Sbjct: 230 -----------KTKYPQGAEKQLIKSITKREVPSGG---LPIDAGAL-----VFNISTTY 270 Query: 224 NVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRD 283 + + NG K + + SG VK PG + GT ++L G+ + Sbjct: 271 AIYDAVING----------KPLVERGITLSGGVKKPGNYWFRIGTKVSDLLNQV--GLVE 318 Query: 284 GLKFKAWQPGGAGTDFLTEAHLDLP 308 K GG T L ++DLP Sbjct: 319 EEKIDRIIYGGPMTG-LPLPNIDLP 342 >UniRef50_Q1N6T4 Electron transport complex protein RnfC n=1 Tax=Bermanella marisrubri RepID=Q1N6T4_9GAMM Length = 727 Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust. Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 24/177 (13%) Query: 17 LRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLM 76 + D + W++ N E R D +++ ++ +G+ G GGA F T +K + + Sbjct: 106 IETDGKDTWIEHKGLDNPLETDR--------DTLIDIIQQSGITGLGGASFPTHVK-TCV 156 Query: 77 PKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEY 136 P++ I L+ NA E EP D +LM LV+G+ + + + I + Sbjct: 157 PEE---RIDTLILNAAECEPYITADDMLMRSYADGLVKGIELLFHLYQPEKCLIGIEDNK 213 Query: 137 IEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGR 193 EA L++A+ +AT T ++ V T +Y G E LI L G+ Sbjct: 214 PEAIEALQKAL-DAT-----------TDDTHKIHVVTIPTKYPSGGEKQLIQILTGK 258 >UniRef50_Q5P537 Electron transport complex protein rnfC (Nitrogen fixation protein rnfC) n=11 Tax=Proteobacteria RepID=Q5P537_AZOSE Length = 508 Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust. Identities = 60/239 (25%), Positives = 89/239 (37%), Gaps = 39/239 (16%) Query: 45 LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLL 104 L P EI +V AG+ G GGA F + +K S N+ L+ N E EP D L Sbjct: 128 LDPAEIGRRVSAAGIVGLGGAAFPSAVKLS---GGREANVDLLIINGGECEPFLSCDDRL 184 Query: 105 MEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTG 164 M + ++G+ I A A I + EA Sbjct: 185 MRERAADAIDGVAIMLHATGAREARIGIEDNKPEAIAA----------------MRAAAA 228 Query: 165 FDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCN 224 ++ V RY G E L+ +L G + PA G V+NV Sbjct: 229 GHPKIRVEPVPTRYPMGSEKHLVLALTGLEVPANGR---PADVG-----VVVHNV----- 275 Query: 225 VPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMR 282 A V + + ++L+ +G V+ PG E+ GT A E++E + GG+R Sbjct: 276 -----ATAVAVRDAVRFGRPLVSRLVTVNGACVREPGNVEVLIGTLADEVVE-FCGGLR 328 >UniRef50_C6PYD8 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=31 Tax=Clostridium RepID=C6PYD8_9CLOT Length = 435 Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust. Identities = 44/195 (22%), Positives = 83/195 (42%), Gaps = 32/195 (16%) Query: 86 YLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRR 145 Y++ N E EP + + ++E+ P L+V G+ + A + + YI ++ ++ EA +L + Sbjct: 111 YIIANCVECEPVLHHNIKMIEEKPELVVNGIRYAMKATGSKKAYIAIKAKHPEAIQSLEK 170 Query: 146 AIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPA 205 + G D ++ + Y GEE A+I+ + G+ P P Sbjct: 171 CL---------------NGSD-DIEIKKLRDMYPMGEERAVIHEIFGKWLEPTQLP---- 210 Query: 206 TSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLW-EL 264 V N ETL N+ VE + + D ++G K P ++ ++ Sbjct: 211 ----LEAKCVVLNGETLANI----TRAVEDKKPVI---DKDITVIGKLKSGKEPNVFSQV 259 Query: 265 PFGTTAREILEDYAG 279 P GT+ + ++E G Sbjct: 260 PVGTSMKSLIEKCGG 274 >UniRef50_B0PD32 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0PD32_9FIRM Length = 437 Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 7/80 (8%) Query: 49 EIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQL 108 E V +K++GL G GGAGF T +K L PK+ S + L+ NA E EP D + + Sbjct: 121 EFVQAIKESGLVGLGGAGFPTHIK--LNPKNLS-EVDTLVVNAAECEPYITSDYRTIIER 177 Query: 109 PHLLVEGMLISAFALKAYRG 128 P +++G+ A+K Y G Sbjct: 178 PQDVLDGI----EAIKKYVG 193 >UniRef50_A1AVH8 Electron transport complex, RnfABCDGE type, C subunit n=2 Tax=sulfur-oxidizing symbionts RepID=A1AVH8_RUTMC Length = 497 Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust. Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 12/119 (10%) Query: 17 LRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLM 76 + D + W+D EG +++ ++ +G+ G GGAGF T +K + Sbjct: 100 IESDDKDKWIDN-------EGCGVDFLHSPVQTMIDCIQKSGIVGLGGAGFPTHVKLGKI 152 Query: 77 PKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGE 135 + + L+ N E EPG D LM+ P ++ G+ I + A R I + + Sbjct: 153 KQCHT-----LIINGTECEPGVMCDNALMQFYPREIIRGVEILLYICGAERAIIAIEDD 206 >UniRef50_UPI0000D54110 formate dehydrogenase, beta subunit n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D54110 Length = 243 Score = 41.6 bits (96), Expect = 0.053, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%) Query: 26 LDEYRSKNGYEGARKALTGLSP---DEIVNQVKDAGLKGRGGAGFSTGLKWSLMPK 78 LD Y GYE R + D ++ Q++++ LKG GGAGF TG KW ++ + Sbjct: 187 LDSYMQSGGYEILRNLKNSNNSNKYDSVLTQLENSALKGLGGAGFPTGKKWRIVKQ 242 >UniRef50_C1DAX3 Possible oxidoreductase n=8 Tax=Proteobacteria RepID=C1DAX3_LARHH Length = 743 Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust. Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 1/95 (1%) Query: 327 MAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQ 386 + D ++V R + ESCG C PCR G + L AL+RG+ + T+ + Sbjct: 122 LVFDPAASLVDAFRQYMQRAVDESCGKCAPCRIGTRKLLDELEALQRGKLTDRSLPTILE 181 Query: 387 LCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEA 421 L + + C L +AI++F E F A Sbjct: 182 LASLVAE-SSLCGLGRTCTLALAAAIRHFPEVFAA 215 >UniRef50_Q39R86 FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=8 Tax=Geobacter RepID=Q39R86_GEOMG Length = 672 Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 5/86 (5%) Query: 351 CGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQS 410 CG CTP + G + L A+ G G ++T+ L L K C + P+ Sbjct: 74 CGKCTPGKKGTRVLMDALAAIVEGRGTEAQLDTIADLGDLLANCK--CTLCQSSTVPVID 131 Query: 411 AIKYFREEFEA---GIKQPFSNTHLI 433 A+K+FR++F A G K+P ++ I Sbjct: 132 AVKHFRDDFLAYVNGAKKPTASHRYI 157 >UniRef50_A6TL21 Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit n=3 Tax=Clostridiaceae RepID=A6TL21_ALKMQ Length = 391 Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 72/173 (41%), Gaps = 34/173 (19%) Query: 86 YLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRR 145 Y++ N E EP + LME+ P +++ G+ A +GYI ++ +Y +A L++ Sbjct: 109 YVIVNGAECEPLLAHNLKLMEESPEVIIRGIKYIMEITNAAKGYIAVKSKYKKAVRGLKK 168 Query: 146 AIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPA 205 A + TG + + Y G+E +I L G P P Sbjct: 169 ACT------------IETGIEVKFLPDI----YPSGDERVIIRELLGVVLEPGK---LPL 209 Query: 206 TSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKN 258 +GA V NVET+ ++ N +E K TK + +GRV++ Sbjct: 210 EAGAV-----VQNVETIKHI----VNAIEL------RKPFITKDITVAGRVQS 247 >UniRef50_B8G1Q5 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=4 Tax=Clostridiales RepID=B8G1Q5_DESHD Length = 451 Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust. Identities = 82/339 (24%), Positives = 128/339 (37%), Gaps = 64/339 (18%) Query: 48 DEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQ 107 +E++ ++K AG+ G GGAGF T +K + R +L N E EP D+ LM Sbjct: 3 EELIEKIKKAGVVGAGGAGFPTHVKV-------NSKARTVLVNGAECEPLLRVDQQLMAG 55 Query: 108 LPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDF 167 +V G+ + A G I L+ +Y +A L + I+ GK I Sbjct: 56 QASKVVMGLELVMSVTGAKEGIISLKHKYHDAISALEKEIS--------GKPIR------ 101 Query: 168 ELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPA 227 +H Y G+E + GR P S V+NVETL N Sbjct: 102 ---IHILDDFYPAGDEHVTVYESTGRL--------VPQGSIPLKVDCVVHNVETLLNTVD 150 Query: 228 ILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKF 287 +A+ Q ++ + + +G V P LP GT E L G D Sbjct: 151 AVAD-----QPVTDT------YLTITGEVNQPLTLRLPIGTAISEALA--MAGYHDSGGM 197 Query: 288 KAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHE-INMVSLVRNLEEFF 346 + + G + + H + I K L + + +H + + +L + Sbjct: 198 QVIEGGPMMGKIVADLH-------QPITKTTKGL---IVLPREHPLLRLKTLPADKVLRQ 247 Query: 347 ARESCGWCTPCRDGLPWSV--------KILRALERGEGQ 377 +R SC C C D P + KI+R + G+GQ Sbjct: 248 SRVSCVQCRFCTDLCPRYLLGHQLEPHKIMRMVNYGQGQ 286 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P31979 NADH-quinone oxidoreductase subunit F n=44 Tax=E... 649 0.0 UniRef50_B0TIC6 NADH dehydrogenase conserved domain protein, nuo... 563 e-159 UniRef50_Q9I0J7 NADH-quinone oxidoreductase subunit F n=193 Tax=... 560 e-158 UniRef50_C8W2X2 NADH dehydrogenase (Quinone) n=24 Tax=Bacteria R... 559 e-158 UniRef50_A7HLR0 NADH dehydrogenase (Quinone) n=58 Tax=Bacteria R... 550 e-155 UniRef50_B1L9S5 NADH dehydrogenase (Quinone) n=14 Tax=Bacteria R... 540 e-152 UniRef50_C6A4M4 NADH:ubiquinone oxidoreductase, NADH-binding sub... 537 e-151 UniRef50_C0GLW6 NADH dehydrogenase (Quinone) n=2 Tax=Desulfonatr... 536 e-151 UniRef50_Q608Y1 NADH dehydrogenase I, F subunit n=4 Tax=Gammapro... 534 e-150 UniRef50_A8MJ02 NADH dehydrogenase (Quinone) n=4 Tax=Bacteria Re... 530 e-149 UniRef50_Q2LYA9 NADH:ubiquinone oxidoreductase, NADH-binding sub... 527 e-148 UniRef50_A3DCA0 NADH dehydrogenase (Quinone) n=10 Tax=cellular o... 526 e-148 UniRef50_D0LDB1 NADH-quinone oxidoreductase, F subunit n=45 Tax=... 520 e-146 UniRef50_Q39TW5 Respiratory-chain NADH dehydrogenase domain, 51 ... 518 e-145 UniRef50_Q39QB2 NADH dehydrogenase I, F subunit n=5 Tax=Bacteria... 518 e-145 UniRef50_Q1DDC8 NADH dehydrogenase I, F subunit n=5 Tax=Bacteria... 517 e-145 UniRef50_B8FFJ2 Respiratory-chain NADH dehydrogenase domain 51 k... 514 e-144 UniRef50_D1CCD0 NADH dehydrogenase (Quinone) n=1 Tax=Thermobacul... 513 e-144 UniRef50_B1ZTP3 NADH dehydrogenase (Quinone) n=1 Tax=Opitutus te... 513 e-144 UniRef50_O27592 NADP-reducing hydrogenase, subunit C n=5 Tax=cel... 512 e-144 UniRef50_Q9XAQ9 NADH-quinone oxidoreductase subunit F n=56 Tax=B... 511 e-143 UniRef50_A6FCN1 NuoF2 NADH I CHAIN F n=1 Tax=Moritella sp. PE36 ... 508 e-142 UniRef50_A5FKK2 NADH dehydrogenase subunit F n=18 Tax=Bacteria R... 508 e-142 UniRef50_A7NPE5 NADH-quinone oxidoreductase, F subunit n=9 Tax=B... 507 e-142 UniRef50_Q56222 NADH-quinone oxidoreductase subunit 1 n=16 Tax=B... 507 e-142 UniRef50_Q2FP97 NADH dehydrogenase (Quinone) n=2 Tax=Methanomicr... 506 e-142 UniRef50_C1F9D7 NADH dehydrogenase I, F subunit n=1 Tax=Acidobac... 506 e-142 UniRef50_Q2LS97 NADH-quinone oxidoreductase chain F n=2 Tax=Synt... 503 e-141 UniRef50_A5FXJ6 NADH dehydrogenase (Quinone) n=11 Tax=Proteobact... 501 e-140 UniRef50_B6ALB9 NADH dehydrogenase (Quinone) n=3 Tax=Leptospiril... 500 e-140 UniRef50_C1A8Y9 NADH-quinone oxidoreductase chain F n=1 Tax=Gemm... 498 e-139 UniRef50_C0GLX1 NADH dehydrogenase (Quinone) n=1 Tax=Desulfonatr... 497 e-139 UniRef50_Q3A639 NADH:ubiquinone oxidoreductase, NADH-binding (51... 493 e-138 UniRef50_A7HJL0 NADH dehydrogenase (Quinone) n=5 Tax=Bacteria Re... 492 e-137 UniRef50_C7NU21 NADH dehydrogenase (Quinone) n=5 Tax=cellular or... 491 e-137 UniRef50_B2KCG6 NADH dehydrogenase (Quinone) n=3 Tax=Bacteria Re... 491 e-137 UniRef50_C6X0Z6 NADH-ubiquinone oxidoreductase chain F n=2 Tax=B... 491 e-137 UniRef50_B8HVQ4 NADH dehydrogenase (Quinone) n=11 Tax=Bacteria R... 491 e-137 UniRef50_B4SQT1 NADH-quinone oxidoreductase, F subunit n=16 Tax=... 488 e-136 UniRef50_Q9RU92 NADH dehydrogenase I, F subunit n=1 Tax=Deinococ... 486 e-136 UniRef50_Q6MDR1 Probable NADH-ubiquinone oxidoreductase chain F ... 485 e-135 UniRef50_A8GM77 NADH-quinone oxidoreductase subunit F n=17 Tax=P... 484 e-135 UniRef50_D2R5G5 NADH dehydrogenase (Quinone) n=3 Tax=Planctomyce... 484 e-135 UniRef50_B5IPC7 Formate dehydrogenase, beta subunit n=1 Tax=Cyan... 483 e-135 UniRef50_B2ULY8 NADH dehydrogenase (Quinone) n=58 Tax=Bacteria R... 482 e-135 UniRef50_A1ALP4 NADH dehydrogenase (Quinone) n=1 Tax=Pelobacter ... 482 e-134 UniRef50_B9KZ80 NAD-dependent formate dehydrogenase beta subunit... 481 e-134 UniRef50_D1C356 NADH dehydrogenase (Quinone) n=1 Tax=Sphaerobact... 481 e-134 UniRef50_A5GD11 NADH dehydrogenase (Quinone) n=6 Tax=Deltaproteo... 479 e-134 UniRef50_P49821 NADH dehydrogenase [ubiquinone] flavoprotein 1, ... 479 e-134 UniRef50_Q0AYU9 NADH dehydrogenase (Quinone) n=4 Tax=Bacteria Re... 477 e-133 UniRef50_O66841 NADH-quinone oxidoreductase subunit F n=6 Tax=Aq... 476 e-133 UniRef50_A9KQG9 NADH dehydrogenase (Quinone) n=6 Tax=Clostridial... 474 e-132 UniRef50_A1VM65 NADH-quinone oxidoreductase, F subunit n=162 Tax... 473 e-132 UniRef50_D2BG77 [Fe] hydrogenase, HymB subunit n=6 Tax=cellular ... 471 e-131 UniRef50_D0LZ02 NADH-quinone oxidoreductase, F subunit n=1 Tax=H... 471 e-131 UniRef50_Q2S5I8 Respiratory-chain NADH dehydrogenase 51 Kd subun... 470 e-131 UniRef50_Q20Z43 NADH dehydrogenase (Quinone) n=2 Tax=Rhodopseudo... 467 e-130 UniRef50_C9RJK0 NADH dehydrogenase (Quinone) n=1 Tax=Fibrobacter... 466 e-129 UniRef50_C6SUV8 MIP04331p (Fragment) n=3 Tax=Drosophila melanoga... 462 e-129 UniRef50_D1N816 NADH dehydrogenase (Quinone) n=1 Tax=Victivallis... 458 e-127 UniRef50_B6JB78 NADH dehydrogenase i chain f n=1 Tax=Oligotropha... 455 e-126 UniRef50_C4XMN9 NADH-quinone oxidoreductase chain F n=5 Tax=Delt... 454 e-126 UniRef50_C1AB34 NADH-quinone oxidoreductase chain F n=1 Tax=Gemm... 452 e-125 UniRef50_B2V6E9 NADH dehydrogenase (Quinone) n=18 Tax=Bacteria R... 452 e-125 UniRef50_A9EX79 NADH dehydrogenase (Ubiquinone) n=1 Tax=Sorangiu... 450 e-125 UniRef50_C1YSE4 NADH:ubiquinone oxidoreductase, NADH-binding (51... 448 e-124 UniRef50_C7M2U2 NADH dehydrogenase (Quinone) n=1 Tax=Acidimicrob... 447 e-124 UniRef50_B5ICD1 Respiratory-chain NADH dehydrogenase 51 Kd subun... 443 e-123 UniRef50_Q2LQE7 NADH-quinone oxidoreductase chain F n=1 Tax=Synt... 443 e-123 UniRef50_C8QXK3 NADH dehydrogenase (Quinone) n=1 Tax=Desulfurivi... 438 e-121 UniRef50_B8D1I1 NADH dehydrogenase I subunit F n=2 Tax=Bacteria ... 433 e-120 UniRef50_C9KNE8 Protein HymB n=2 Tax=Veillonellaceae RepID=C9KNE... 432 e-119 UniRef50_Q9ZBV8 Putative respiratory chain oxidoreductase n=4 Ta... 432 e-119 UniRef50_A3EW61 NADH dehydrogenase (Quinone) n=3 Tax=Bacteria Re... 424 e-117 UniRef50_Q1QYV5 NADH dehydrogenase (Quinone) n=66 Tax=Proteobact... 422 e-116 UniRef50_C0X553 NADH dehydrogenase (Quinone) n=24 Tax=Firmicutes... 422 e-116 UniRef50_B4Q4H9 GD22602 n=4 Tax=Coelomata RepID=B4Q4H9_DROSI 421 e-116 UniRef50_Q2SQP5 NADH:ubiquinone oxidoreductase, NADH-binding (51... 419 e-115 UniRef50_C4LEV2 Respiratory-chain NADH dehydrogenase domain 51 k... 416 e-115 UniRef50_Q47HE6 NADH dehydrogenase (Ubiquinone), 24 kDa subunit:... 411 e-113 UniRef50_A8ERL2 NADH-quinone oxidoreductase, F subunit n=2 Tax=C... 409 e-113 UniRef50_A1WBG0 NADH dehydrogenase (Quinone) n=11 Tax=Proteobact... 407 e-112 UniRef50_B6K7D1 NADH-quinone oxidoreductase subunit F n=1 Tax=Sc... 407 e-112 UniRef50_A9BV38 Respiratory-chain NADH dehydrogenase domain 51 k... 404 e-111 UniRef50_B1Y7Y8 Respiratory-chain NADH dehydrogenase domain 51 k... 401 e-110 UniRef50_B8ERX4 Respiratory-chain NADH dehydrogenase domain 51 k... 400 e-110 UniRef50_A1Z9Z7 CG8102, isoform A n=7 Tax=melanogaster subgroup ... 397 e-109 UniRef50_A1SU84 Hydrogenase, NADP-reducing subunit C n=1 Tax=Psy... 396 e-109 UniRef50_A7IMB3 NADH dehydrogenase (Quinone) n=15 Tax=Proteobact... 396 e-108 UniRef50_C6I0C0 NADH dehydrogenase (Quinone) n=1 Tax=Leptospiril... 393 e-108 UniRef50_Q1V283 NAD-dependent formate dehydrogenase beta subunit... 392 e-107 UniRef50_A2DV30 Respiratory-chain NADH dehydrogenase 51 Kd subun... 388 e-106 UniRef50_B9MEW2 Respiratory-chain NADH dehydrogenase domain 51 k... 387 e-106 UniRef50_B1CAU2 Putative uncharacterized protein n=1 Tax=Anaerof... 385 e-105 UniRef50_D2PS76 Respiratory-chain NADH dehydrogenase domain 51 k... 385 e-105 UniRef50_D0IAF4 NAD-reducing hydrogenase hoxS subunit alpha n=1 ... 384 e-105 UniRef50_A6GJI0 Putative NADH dehydrogenase I chain F n=1 Tax=Pl... 383 e-105 UniRef50_P22317 NAD-reducing hydrogenase hoxS subunit alpha n=5 ... 382 e-104 UniRef50_O94500 NADH-ubiquinone oxidoreductase 51 kDa subunit, m... 378 e-103 UniRef50_UPI0000384AE3 COG1894: NADH:ubiquinone oxidoreductase, ... 377 e-103 UniRef50_Q293C9 GA20825 n=4 Tax=Drosophila RepID=Q293C9_DROPS 365 2e-99 UniRef50_D1C1S2 NADH dehydrogenase (Quinone) n=1 Tax=Sphaerobact... 363 8e-99 UniRef50_B2UIT6 NADH dehydrogenase (Quinone) n=6 Tax=Betaproteob... 360 8e-98 UniRef50_Q1PZQ6 Similar to NADH dehydrogenase I chain F (1st mod... 357 7e-97 UniRef50_A0K164 NADH dehydrogenase (Quinone) n=2 Tax=Actinomycet... 343 9e-93 UniRef50_UPI00016C4299 NADH dehydrogenase (quinone) n=1 Tax=Gemm... 319 2e-85 UniRef50_Q51696 Putative uncharacterized protein ORF2 n=1 Tax=Br... 301 2e-80 UniRef50_B4K2N7 GH25296 n=4 Tax=Coelomata RepID=B4K2N7_DROGR 298 3e-79 UniRef50_B2HFH1 NADH dehydrogenase I (Chain F) (NADH-ubiquinone ... 292 2e-77 UniRef50_C3JHP2 Respiratory-chain NADH dehydrogenase domain, 51 ... 287 5e-76 UniRef50_O96948 Hydrogenase (Fragment) n=72 Tax=root RepID=O9694... 287 6e-76 UniRef50_C1IC09 Respiratory-chain NADH dehydrogenase n=2 Tax=Str... 287 6e-76 UniRef50_Q67JR5 NADH dehydrogenase subunit n=1 Tax=Symbiobacteri... 287 7e-76 UniRef50_A5X3H0 HtxX n=1 Tax=Xanthobacter flavus RepID=A5X3H0_XANFL 273 1e-71 UniRef50_B4V5Q7 Oxidoreductase n=1 Tax=Streptomyces sp. Mg1 RepI... 266 1e-69 UniRef50_Q18DS5 NAD-reducing hydrogenase, alpha subunit n=1 Tax=... 265 2e-69 UniRef50_D2RYM8 Respiratory-chain NADH dehydrogenase domain 51 k... 265 2e-69 UniRef50_Q2J9U3 Respiratory-chain NADH dehydrogenase domain, 51 ... 261 3e-68 UniRef50_D1A5I5 NADH dehydrogenase (Quinone) n=2 Tax=Actinomycet... 257 5e-67 UniRef50_B1CC51 Putative uncharacterized protein n=1 Tax=Anaerof... 254 5e-66 UniRef50_C4RMV1 Oxidoreductase (Fragment) n=6 Tax=Actinomycetale... 245 3e-63 UniRef50_B5HXD6 Oxidoreductase n=2 Tax=Streptomyces RepID=B5HXD6... 233 9e-60 UniRef50_C1V5Z7 NADH dehydrogenase subunit F n=1 Tax=Halogeometr... 229 1e-58 UniRef50_C7Q9V1 Respiratory-chain NADH dehydrogenase domain 51 k... 229 2e-58 UniRef50_Q5V638 Putative NADH dehydrogenase I, F subunit n=1 Tax... 229 2e-58 UniRef50_A1SNE6 Respiratory-chain NADH dehydrogenase domain, 51 ... 229 2e-58 UniRef50_UPI0001B56646 respiratory-chain NADH dehydrogenase doma... 228 4e-58 UniRef50_C7LYX8 Respiratory-chain NADH dehydrogenase domain 51 k... 222 3e-56 UniRef50_D2S0Q1 NADH ubiquinone oxidoreductase, F subunit, iron ... 221 4e-56 UniRef50_C0R1F3 DH dehydrogenase n=3 Tax=Brachyspira RepID=C0R1F... 221 4e-56 UniRef50_D2S0T7 Respiratory-chain NADH dehydrogenase domain 51 k... 219 2e-55 UniRef50_C8XFQ0 Respiratory-chain NADH dehydrogenase domain 51 k... 216 1e-54 UniRef50_B0K144 Electron transport complex, RnfABCDGE type, C su... 215 3e-54 UniRef50_A1SQ39 Respiratory-chain NADH dehydrogenase domain, 51 ... 214 6e-54 UniRef50_A5ZMX0 Putative uncharacterized protein n=2 Tax=Clostri... 212 1e-53 UniRef50_C6L993 Na(+)-translocating NADH-quinone reductase, A su... 211 5e-53 UniRef50_C7RDT7 Electron transport complex, RnfABCDGE type, C su... 210 9e-53 UniRef50_C9XNL2 Electron transport complex protein n=7 Tax=Clost... 209 2e-52 UniRef50_D2RN96 Electron transport complex, RnfABCDGE type, C su... 208 4e-52 UniRef50_Q65U33 Electron transport complex protein rnfC n=29 Tax... 206 1e-51 UniRef50_UPI0001AF5A30 NADH dehydrogenase I subunit F n=1 Tax=Ps... 206 2e-51 UniRef50_A5HYR2 Electron transport complex protein n=37 Tax=Bact... 206 2e-51 UniRef50_A6LZW7 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 204 5e-51 UniRef50_D1PFH3 Electron transport complex, RnfABCDGE type, C su... 204 8e-51 UniRef50_Q0TQI8 Electron transport complex, RnfABCDGE type, C su... 203 1e-50 UniRef50_Q8RIJ6 Nitrogen fixation iron-sulphur protein RNFC n=17... 201 5e-50 UniRef50_A7BY78 Electron transport complex protein rnfC n=4 Tax=... 199 1e-49 UniRef50_D1N841 Electron transport complex, RnfABCDGE type, C su... 196 1e-48 UniRef50_C0WAW3 Electron transport complex protein n=1 Tax=Acida... 196 2e-48 UniRef50_C7HT97 Na(+)-translocating NADH-quinone reductase, A su... 196 2e-48 UniRef50_C4FA62 Putative uncharacterized protein n=2 Tax=Collins... 194 5e-48 UniRef50_A5N7M5 RnfC n=6 Tax=Clostridiales RepID=A5N7M5_CLOK5 194 5e-48 UniRef50_B2A142 Electron transport complex, RnfABCDGE type, C su... 194 6e-48 UniRef50_B9BGV0 NAD-dependent formate dehydrogenase beta subunit... 192 3e-47 UniRef50_A8SLB1 Putative uncharacterized protein n=1 Tax=Parvimo... 191 4e-47 UniRef50_B0S407 Electron transport complex protein n=2 Tax=Fineg... 191 7e-47 UniRef50_B2A1V2 Electron transport complex, RnfABCDGE type, C su... 190 1e-46 UniRef50_A1WTR7 Electron transport complex, RnfABCDGE type, C su... 189 1e-46 UniRef50_C9A8J9 Respiratory-chain NADH dehydrogenase 51 kDa subu... 189 2e-46 UniRef50_Q0PIB6 Ethanolamine utilization Fe-S center protein eut... 189 2e-46 UniRef50_Q603B2 Electron transport complex, C subunit n=1 Tax=Me... 188 4e-46 UniRef50_B5JW06 EleCtron transport complex, rnfabcdge type, c su... 186 1e-45 UniRef50_A1WT48 Electron transport complex, RnfABCDGE type, C su... 186 2e-45 UniRef50_B6BWH5 Electron transport complex protein RnfC n=2 Tax=... 185 4e-45 UniRef50_A1TZ63 Electron transport complex, RnfABCDGE type, C su... 184 6e-45 UniRef50_Q5LC48 Electron transport complex protein n=41 Tax=Bact... 183 1e-44 UniRef50_Q73PG1 Na(+)-translocating NADH-quinone reductase, A su... 181 4e-44 UniRef50_D1Y5V9 Electron transport complex protein RnfC n=1 Tax=... 181 4e-44 UniRef50_C0QFQ4 RnfC1 n=1 Tax=Desulfobacterium autotrophicum HRM... 181 4e-44 UniRef50_A8AH10 Electron transport complex protein rnfC n=6 Tax=... 180 7e-44 UniRef50_B5JR42 Electron transport complex, RnfABCDGE type, C su... 180 1e-43 UniRef50_C9M8J9 Electron transport complex, RnfABCDGE type, C su... 179 2e-43 UniRef50_Q52716 Electron transport complex protein rnfC n=9 Tax=... 178 3e-43 UniRef50_A0L5G6 Electron transport complex, RnfABCDGE type, C su... 176 2e-42 UniRef50_C9LBM9 Na(+)-translocating NADH-quinone reductase, A su... 174 7e-42 UniRef50_A9KN64 Respiratory-chain NADH dehydrogenase domain 51 k... 174 8e-42 UniRef50_Q31GU4 NADH oxidoreductase, RnfABCDGE type, C subunit n... 173 1e-41 UniRef50_Q67R12 Na+-transporting NADH-quinone reductase subunit ... 172 2e-41 UniRef50_Q21I18 Serine/threonine protein kinase n=1 Tax=Saccharo... 169 2e-40 UniRef50_C4Z9G3 RnfC/nqrF n=16 Tax=Bacteria RepID=C4Z9G3_EUBR3 168 3e-40 UniRef50_A4SEA3 Electron transport complex, RnfABCDGE type, C su... 162 3e-38 UniRef50_C4LFE2 Respiratory-chain NADH dehydrogenase domain 51 k... 161 5e-38 UniRef50_A0LLS5 Electron transport complex, RnfABCDGE type, C su... 161 6e-38 UniRef50_A9NEB0 NADH oxidoreductase complex RnfABCDGE type, C su... 160 8e-38 UniRef50_Q6AIR8 Related to propanediol utilization protein (PduS... 158 5e-37 UniRef50_A5N6H2 RnfC related NADH dehydrogenase n=2 Tax=Clostrid... 156 1e-36 UniRef50_D1AJ84 Respiratory-chain NADH dehydrogenase domain 51 k... 156 2e-36 UniRef50_A0AHN6 Complete genome n=18 Tax=Listeria RepID=A0AHN6_L... 151 4e-35 UniRef50_B2CIR6 NADH:ubiquinone oxidoreductase NADH-binding 51kD... 150 1e-34 UniRef50_B1KU48 Respiratory-chain NADH dehydrogenase family prot... 148 3e-34 UniRef50_B1ZMR0 Respiratory-chain NADH dehydrogenase domain 51 k... 143 1e-32 UniRef50_C9NKP5 Oxidoreductase (Fragment) n=9 Tax=Streptomyces R... 142 3e-32 Sequences not found previously or not previously below threshold: UniRef50_Q1N6T4 Electron transport complex protein RnfC n=1 Tax=... 185 4e-45 UniRef50_D1B8H6 Electron transport complex, RnfABCDGE type, C su... 184 7e-45 UniRef50_B0VFP0 Electron transport complex protein rnfC, NAD and... 182 3e-44 UniRef50_A3DI53 Electron transport complex, RnfABCDGE type, C su... 181 4e-44 UniRef50_Q1Q5X5 Conserved hypothetical iron sulfur protein n=1 T... 181 6e-44 UniRef50_C7GZP5 Na(+)-translocating NADH-quinone reductase, A su... 180 8e-44 UniRef50_Q3A7W8 Predicted NADH:ubiquinone oxidoreductase, subuni... 176 1e-42 UniRef50_Q1ZEG2 Electron transport complex protein RnfC n=1 Tax=... 175 3e-42 UniRef50_B4RTX9 Electron transport complex protein RnfC n=2 Tax=... 175 4e-42 UniRef50_D1PN92 Na(+)-translocating NADH-quinone reductase, A su... 173 1e-41 UniRef50_Q5P537 Electron transport complex protein rnfC (Nitroge... 172 2e-41 UniRef50_Q15RL3 Electron transport complex, RnfABCDGE type, C su... 172 2e-41 UniRef50_Q2SKU6 Predicted NADH:ubiquinone oxidoreductase, subuni... 170 1e-40 UniRef50_C1SKX2 Electron transport complex, RnfABCDGE type, C su... 169 2e-40 UniRef50_C0R202 Electron transport complex protein n=2 Tax=Brach... 169 2e-40 UniRef50_A8ZSV2 Electron transport complex, RnfABCDGE type, C su... 169 2e-40 UniRef50_D0L1N5 Electron transport complex, RnfABCDGE type, C su... 169 3e-40 UniRef50_C4L9H6 Electron transport complex, RnfABCDGE type, C su... 168 3e-40 UniRef50_C2MC01 Electron transport complex protein RnfC n=1 Tax=... 168 4e-40 UniRef50_A9BJD0 Electron transport complex, RnfABCDGE type, C su... 167 5e-40 UniRef50_C8WMP9 Electron transport complex, RnfABCDGE type, C su... 167 5e-40 UniRef50_Q0F0I1 Electron transport complex protein RnfC n=1 Tax=... 167 5e-40 UniRef50_C8WE25 Electron transport complex, RnfABCDGE type, C su... 167 7e-40 UniRef50_C9N0M8 Electron transport complex, RnfABCDGE type, C su... 167 1e-39 UniRef50_B0PD32 Putative uncharacterized protein n=3 Tax=Clostri... 166 2e-39 UniRef50_Q0AAG9 Electron transport complex, RnfABCDGE type, C su... 164 4e-39 UniRef50_A5EVI2 Electron transport complex protein, C subunit n=... 164 8e-39 UniRef50_D1VUL2 Electron transport complex protein RnfC n=1 Tax=... 162 2e-38 UniRef50_C5BT99 Electron transport complex, RnfABCDGE type, C su... 161 4e-38 UniRef50_C6WYE0 Electron transport complex, RnfABCDGE type, C su... 160 1e-37 UniRef50_Q47GW4 Electron transport complex, RnfABCDGE type, C su... 160 1e-37 UniRef50_A3WQG7 Electron transport complex protein RnfC n=1 Tax=... 159 2e-37 UniRef50_Q0VP39 Electron transport complex protein rnfC n=12 Tax... 158 4e-37 UniRef50_C5SAZ1 Electron transport complex, RnfABCDGE type, C su... 154 6e-36 UniRef50_D1KBG6 Electron transport complex protein RnfC n=1 Tax=... 153 1e-35 UniRef50_C6PYB3 Respiratory-chain NADH dehydrogenase domain 51 k... 152 2e-35 UniRef50_A1AVH8 Electron transport complex, RnfABCDGE type, C su... 152 2e-35 UniRef50_C7NCF5 Electron transport complex, RnfABCDGE type, C su... 152 2e-35 UniRef50_C8NC21 Electron transport complex protein RnfC (Fragmen... 152 4e-35 UniRef50_A6FIW1 Electron transport complex protein RnfC n=2 Tax=... 151 6e-35 UniRef50_C5BDE7 Electron transport complex protein rnfC n=215 Ta... 150 7e-35 UniRef50_A9L0J9 Electron transport complex, RnfABCDGE type, C su... 150 7e-35 UniRef50_B0MQ91 Putative uncharacterized protein n=1 Tax=Eubacte... 150 1e-34 UniRef50_A1SSX3 Electron transport complex, RnfABCDGE type, C su... 148 3e-34 UniRef50_A7FHZ3 Electron transport complex protein rnfC n=42 Tax... 147 9e-34 UniRef50_B0P8J3 Putative uncharacterized protein n=1 Tax=Anaerot... 145 3e-33 UniRef50_D2MNP9 Electron transport complex, RnfABCDGE type, C su... 145 4e-33 UniRef50_D1B7S1 Respiratory-chain NADH dehydrogenase domain 51 k... 144 5e-33 UniRef50_A6NT39 Putative uncharacterized protein n=1 Tax=Bactero... 144 5e-33 UniRef50_A6VVJ2 Electron transport complex, RnfABCDGE type, C su... 144 6e-33 UniRef50_Q482U5 Electron transport complex, RnfABCDGE type, C su... 144 9e-33 UniRef50_B7CAH2 Putative uncharacterized protein n=1 Tax=Eubacte... 143 1e-32 UniRef50_C1D6V6 Electron transport complex protein RnfC n=2 Tax=... 141 6e-32 UniRef50_B8G1Q5 Respiratory-chain NADH dehydrogenase domain 51 k... 141 6e-32 UniRef50_A1U014 Respiratory-chain NADH dehydrogenase domain, 51 ... 139 2e-31 UniRef50_B8FDM6 Respiratory-chain NADH dehydrogenase domain 51 k... 139 2e-31 UniRef50_C6LEW4 PduS protein n=3 Tax=Bacteria RepID=C6LEW4_9FIRM 139 3e-31 >UniRef50_P31979 NADH-quinone oxidoreductase subunit F n=44 Tax=Enterobacteriaceae RepID=NUOF_ECOLI Length = 445 Score = 649 bits (1673), Expect = 0.0, Method: Composition-based stats. Identities = 445/445 (100%), Positives = 445/445 (100%) Query: 1 MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLK 60 MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLK Sbjct: 1 MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLK 60 Query: 61 GRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISA 120 GRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISA Sbjct: 61 GRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISA 120 Query: 121 FALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYIC 180 FALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYIC Sbjct: 121 FALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYIC 180 Query: 181 GEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNIS 240 GEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNIS Sbjct: 181 GEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNIS 240 Query: 241 KSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFL 300 KSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFL Sbjct: 241 KSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFL 300 Query: 301 TEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDG 360 TEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDG Sbjct: 301 TEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDG 360 Query: 361 LPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFE 420 LPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFE Sbjct: 361 LPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFE 420 Query: 421 AGIKQPFSNTHLINGIQPNLLKERW 445 AGIKQPFSNTHLINGIQPNLLKERW Sbjct: 421 AGIKQPFSNTHLINGIQPNLLKERW 445 >UniRef50_B0TIC6 NADH dehydrogenase conserved domain protein, nuoe and nuof n=170 Tax=cellular organisms RepID=B0TIC6_HELMI Length = 906 Score = 563 bits (1451), Expect = e-159, Method: Composition-based stats. Identities = 178/442 (40%), Positives = 267/442 (60%), Gaps = 7/442 (1%) Query: 7 TPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAG 66 P+ H + R P +D+Y + GY G KALT ++P ++V++V +GL+GRGGAG Sbjct: 416 HPQ-HRVALRNCGVINPEDIDDYLASGGYGGLAKALTAMTPAQVVDEVTKSGLRGRGGAG 474 Query: 67 FSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAY 126 F TG KW+ +Y++CNADE +PG + DR ++E PH ++E M I+ +A+ A Sbjct: 475 FLTGRKWAFTAAAPDTP-KYVVCNADEGDPGAFMDRSILEGDPHAVLEAMAIAGYAIGAR 533 Query: 127 RGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETAL 186 +GYI++R EY A L AIA+A +AGLLG++I+GTGF F++ + GAG ++CGEETAL Sbjct: 534 QGYIYVRAEYPVAVHRLEVAIAQARQAGLLGEDILGTGFSFDIDLRLGAGAFVCGEETAL 593 Query: 187 INSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAG 246 ++S+ G+R PR++PP+PA SG WGKPT +NNVET N+P I+ NG WY + + G Sbjct: 594 LHSVSGKRGEPRARPPYPALSGLWGKPTLLNNVETYANIPQIIVNGAAWYAAMGTERSKG 653 Query: 247 TKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLD 306 TK+ +G++ N GL E+P GTT R I+ D GG+ G FKA Q GG L +LD Sbjct: 654 TKIFSLAGKINNTGLIEVPMGTTLRTIIYDIGGGIPGGKAFKAVQTGGPSGGCLPAEYLD 713 Query: 307 LPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVK 366 P++++S+ GS +G+ + +D MV + R EF ESCG CTPCR G ++ Sbjct: 714 TPIDYDSLIAVGSMMGSGGLIVMDESDCMVDIARFYLEFTQDESCGKCTPCRIGTRRLLE 773 Query: 367 ILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQP 426 I+ + G+G+P D+E LE+L R + + C A + S ++YFR E+EA I Sbjct: 774 IITGITEGKGEPKDLERLEELGRDIREA-SLCGLGQTAPNLVLSTLRYFRHEYEAHINHK 832 Query: 427 FSNTHLINGIQPN----LLKER 444 + ++P + +E+ Sbjct: 833 RCPAGVCAALRPKGKFRIDEEK 854 >UniRef50_Q9I0J7 NADH-quinone oxidoreductase subunit F n=193 Tax=Bacteria RepID=NUOF_PSEAE Length = 448 Score = 560 bits (1443), Expect = e-158, Method: Composition-based stats. Identities = 335/424 (79%), Positives = 371/424 (87%), Gaps = 2/424 (0%) Query: 4 IIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRG 63 + R+ ETHPLTWRLR+D QPVWL+EY+SK+GY ARKALT ++ D+IV VKD+GLKGRG Sbjct: 12 MARSAETHPLTWRLREDAQPVWLEEYQSKDGYAAARKALTQMAQDDIVQTVKDSGLKGRG 71 Query: 64 GAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFAL 123 GAGF TG+KW LMPKDES+NIRYLLCNADEMEP T+KDR+LMEQLPHLLVEGMLISA AL Sbjct: 72 GAGFPTGVKWGLMPKDESLNIRYLLCNADEMEPNTWKDRMLMEQLPHLLVEGMLISARAL 131 Query: 124 KAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEE 183 KAYRGYIFLRGEY++AA NL RAI EA AGLLGKNI+G+GFDFELFVHTGAGRYICGEE Sbjct: 132 KAYRGYIFLRGEYVDAARNLNRAIDEAKAAGLLGKNILGSGFDFELFVHTGAGRYICGEE 191 Query: 184 TALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSK 243 TALINSLEGRRANPRSKPPFPA G WGKPTCVNNVETLCNVPAI+ NGV+WY+ +++ Sbjct: 192 TALINSLEGRRANPRSKPPFPAAVGVWGKPTCVNNVETLCNVPAIVGNGVDWYKTLARPG 251 Query: 244 D--AGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLT 301 GTKLMGFSG+VKNPGLWELPFG +ARE+ EDYAGGMRDG + KAWQPGGAGT FL Sbjct: 252 SEDMGTKLMGFSGKVKNPGLWELPFGVSARELFEDYAGGMRDGFQLKAWQPGGAGTGFLL 311 Query: 302 EAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGL 361 HLD M I K G+R+GT LAMAVD INMVSL+RN+EEFFARESCGWCTPCRDGL Sbjct: 312 PEHLDAQMFAGGIAKVGTRMGTGLAMAVDDSINMVSLLRNMEEFFARESCGWCTPCRDGL 371 Query: 362 PWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEA 421 PWSVK+LRALERGEGQPGD+ETLEQL FLGPGKTFCAHAPGAVEPL SA+KYFR EFEA Sbjct: 372 PWSVKLLRALERGEGQPGDLETLEQLVNFLGPGKTFCAHAPGAVEPLGSALKYFRAEFEA 431 Query: 422 GIKQ 425 GI + Sbjct: 432 GISR 435 >UniRef50_C8W2X2 NADH dehydrogenase (Quinone) n=24 Tax=Bacteria RepID=C8W2X2_DESAS Length = 597 Score = 559 bits (1441), Expect = e-158, Method: Composition-based stats. Identities = 177/424 (41%), Positives = 258/424 (60%), Gaps = 2/424 (0%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 +T R P ++EY +++GY+ K L+ SP+E+++ +K +GL+GRGGAGF TGLK Sbjct: 118 VTLRNTGLINPESIEEYIARDGYQALGKVLSKYSPEEVISAIKASGLRGRGGAGFPTGLK 177 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 W + S N +Y++CNADE +PG + DR ++E PH ++E M I +A+ A +G+I++ Sbjct: 178 WEFTARA-SGNPKYVVCNADEGDPGAFMDRSILEGDPHSVLEAMAICGYAIGAEKGFIYV 236 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 R EY A L AI + E GLLG+NI TGF+F++ + GAG ++CGEETAL+ S+EG Sbjct: 237 RAEYPLAVQRLETAIGKCLEYGLLGRNIFSTGFNFDIEIRVGAGAFVCGEETALLASIEG 296 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGF 252 RR PR KPPFPA G WGKPT +NNVET N+P I+ NG EW+ I GTK+ Sbjct: 297 RRGEPRPKPPFPAQEGLWGKPTVINNVETWANIPPIILNGPEWFSAIGTENSKGTKVFAL 356 Query: 253 SGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFE 312 +G++ N GL E+P GT +EI+ D GG+ +G KFKA Q GG + +LD P++++ Sbjct: 357 AGKINNTGLVEVPMGTPLKEIIYDIGGGIPNGKKFKAVQTGGPSGGCIPAEYLDTPVDYD 416 Query: 313 SIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALE 372 S+ K G+ +G+ + VD + MV L + EF ESCG C PCR G ++I+ + Sbjct: 417 SLVKLGTIMGSGGMIIVDEDTCMVDLAKFFLEFVQEESCGKCAPCRIGTKRMLEIMERIV 476 Query: 373 RGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHL 432 G G+ GDIE LE+L + + C A P+ S +++FREE+ A IK Sbjct: 477 EGNGKDGDIELLEELSQGI-KSSALCGLGQTAPNPVLSTLRHFREEYIAHIKDKRCPAGA 535 Query: 433 INGI 436 + Sbjct: 536 CQAL 539 >UniRef50_A7HLR0 NADH dehydrogenase (Quinone) n=58 Tax=Bacteria RepID=A7HLR0_FERNB Length = 610 Score = 550 bits (1417), Expect = e-155, Method: Composition-based stats. Identities = 173/423 (40%), Positives = 260/423 (61%), Gaps = 2/423 (0%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 + R P+ ++EY +++GY KALT ++P++++ ++KD+GL+GRGGAGF TGLK Sbjct: 121 IALRNVGVVDPMSIEEYIARDGYFALHKALTTMTPEDVIKEIKDSGLRGRGGAGFPTGLK 180 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 W L + +S +I+Y++CNADE +PG + DR ++E PH +VE M I+ +A+ A +G++++ Sbjct: 181 WELARQQKS-DIKYMICNADEGDPGAFMDRSVLEGDPHSIVEAMTIAGYAIGAQKGFVYV 239 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 R EY A L RAI A E G LG+NI+GT F F++ + GAG ++CGEETAL++S+EG Sbjct: 240 RAEYPLAIERLGRAIETAHEYGFLGENILGTNFSFDIEIRIGAGAFVCGEETALMHSIEG 299 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGF 252 +R PR KPPFP G WGKP+ +NNVETL VP I+ G W++ K GTK+ Sbjct: 300 KRGQPRVKPPFPVQKGLWGKPSVINNVETLSLVPPIILKGASWFRQYGTEKSPGTKVFAL 359 Query: 253 SGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFE 312 +G++KN GL E+P G T RE+L + GG G + KA Q GG + D P+++E Sbjct: 360 AGKIKNTGLVEVPMGITLRELLYEIGGGHPQGKQIKAVQTGGPSGGVIPSEFFDTPVDYE 419 Query: 313 SIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALE 372 S+GK G+ +G+ + +D + MV + + EF ESCG CTPCR+G +L + Sbjct: 420 SLGKLGAIMGSGGMIVLDEDDCMVDVAKFFLEFTVDESCGKCTPCREGTKVMYDLLDKIT 479 Query: 373 RGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHL 432 +GEG DIE LE+L + + + C A P+ S ++Y+R E+EA +K Sbjct: 480 KGEGTMEDIEKLERLAQVI-KDSSLCGLGQTAPNPVLSTLRYYRHEYEAHVKDNICPAKK 538 Query: 433 ING 435 Sbjct: 539 CKA 541 >UniRef50_B1L9S5 NADH dehydrogenase (Quinone) n=14 Tax=Bacteria RepID=B1L9S5_THESQ Length = 545 Score = 540 bits (1391), Expect = e-152, Method: Composition-based stats. Identities = 183/431 (42%), Positives = 260/431 (60%), Gaps = 3/431 (0%) Query: 4 IIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRG 63 + + E + + + P ++EY +++GY KAL + P E++ ++K +GL+GRG Sbjct: 103 VEKVAEETRIVLKNVGEIDPTRIEEYIARDGYFALAKAL-QMEPGEVIEEIKRSGLRGRG 161 Query: 64 GAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFAL 123 GAGF TGLKW K S + +Y+LCNADE EPGT+KDRL+ME PH L+EGM+I+ +A+ Sbjct: 162 GAGFPTGLKWEFTYKA-SADQKYVLCNADEGEPGTFKDRLIMEGDPHSLIEGMIIAGYAV 220 Query: 124 KAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEE 183 A +GYI++RGEY + L++A+ A E G LG+NI+G+GF+F+L + GAG Y+ GEE Sbjct: 221 GATKGYIYIRGEYHSSIEILKKAVERAYEYGFLGENILGSGFNFDLKIRLGAGAYVAGEE 280 Query: 184 TALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSK 243 TALI S+EG+ A PR KPP+P T G +GKPT VNNVET NVP I+ NG EW++ Sbjct: 281 TALIESIEGKPARPRLKPPYPPTFGLFGKPTVVNNVETFVNVPRIIMNGAEWFKKFGTES 340 Query: 244 DAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEA 303 GTK+ G V G+ E+P G T R+++ + GG+ G K K Q GG+ F+ Sbjct: 341 SPGTKVFSLVGNVVRKGIVEVPMGVTVRDLIFKFGGGIEGGRKLKVVQTGGSAGTFIGPD 400 Query: 304 HLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPW 363 LD+P++F+S K G LG+ + + D +V L + FF ESCG CTPCR+G Sbjct: 401 KLDVPLDFDSYAKYGVSLGSGVILVADETHCVVDLALTVMRFFEHESCGKCTPCREGTRM 460 Query: 364 SVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGI 423 V IL + RGEG+ D++TL ++ R G +FC PL S + F EEF A I Sbjct: 461 IVNILERISRGEGKKEDLDTLREIARNAGE-TSFCGLGQSIPVPLLSIVDNFEEEFRAHI 519 Query: 424 KQPFSNTHLIN 434 + Sbjct: 520 GADKCPVGVCE 530 >UniRef50_C6A4M4 NADH:ubiquinone oxidoreductase, NADH-binding subunit F n=33 Tax=cellular organisms RepID=C6A4M4_THESM Length = 602 Score = 537 bits (1384), Expect = e-151, Method: Composition-based stats. Identities = 170/433 (39%), Positives = 261/433 (60%), Gaps = 5/433 (1%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 + P ++EY + GYE +KA + P+EI++ + +GL+GRGGAGF TGLK Sbjct: 118 IVLENSGYIDPENIEEYIAAGGYEALKKAFK-MKPEEIIDFITKSGLRGRGGAGFPTGLK 176 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 W +D + +Y++CNADE +PG + DR ++E PH ++EGM+I A+A+ A +G+I++ Sbjct: 177 WKFT-RDAPGDEKYIVCNADEGDPGAFMDRNVLEGDPHRVIEGMIIGAYAIGATKGFIYV 235 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 R EY A LR A+ +A E G LG+NI+G+GF FE+ + GAG ++CGEETALI S+EG Sbjct: 236 RAEYPLAIKRLRIALKQAREKGFLGENILGSGFSFEIVIKEGAGAFVCGEETALIASIEG 295 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGF 252 +R PR +PP+PA G WG+PT +NNVET NVP I+ +G E Y + K GTK+ Sbjct: 296 KRGMPRPRPPYPAQKGLWGRPTNINNVETWANVPWIIKHGWEAYAALGTEKSKGTKVFAL 355 Query: 253 SGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFE 312 SG++K+ G E+P G T REIL + GG + G K KA Q GG + + + P+++E Sbjct: 356 SGKIKHGGNVEVPMGITLREILYEIGGGTKTGKKIKAVQLGGPSGGCIPDYLFNTPVDYE 415 Query: 313 SIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALE 372 S+ G+ +G+ + +D + MV + + +F +ESCG CT CR G ++L + Sbjct: 416 SVTATGAIMGSGGMVVMDEDTCMVDVAKFFLDFTVKESCGKCTFCRLGTKRMWELLDKIT 475 Query: 373 RGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHL 432 +GEG DIE LE+L + G + C A P+ + +KYF++E+ A I + + Sbjct: 476 KGEGALEDIEKLEKLAPLVKTG-SLCGLGQTAPNPVLTTLKYFKDEYLAHI-EGRCPAKV 533 Query: 433 ING-IQPNLLKER 444 I+ ++ E+ Sbjct: 534 CKPLIKYVIITEK 546 >UniRef50_C0GLW6 NADH dehydrogenase (Quinone) n=2 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GLW6_9DELT Length = 774 Score = 536 bits (1381), Expect = e-151, Method: Composition-based stats. Identities = 169/426 (39%), Positives = 257/426 (60%), Gaps = 3/426 (0%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 + R P + +Y + G++ +K + +SPD+++ +VK A L+GRGGAGF G K Sbjct: 137 IALRNTGKVDPHDIHQYIAAGGFKAVKKMFSRMSPDDVLEEVKKANLRGRGGAGFPAGFK 196 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 W+ + + ++ N DE +PG + DR +ME P L+EGMLI A+++ A G+I++ Sbjct: 197 WAHTKRSGKGVPKLVIANGDEGDPGAFMDRSIMEGDPFSLLEGMLICAYSIDANFGFIYV 256 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 R EY A L +AI +A E GLLG+NI+GTGFDF +F+ GAG ++CGE T+L+ SLEG Sbjct: 257 RHEYPLAIKTLEKAIKQAEEMGLLGRNILGTGFDFSVFIKEGAGAFVCGEATSLVASLEG 316 Query: 193 RRANPRSKPPFPATSG--AWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLM 250 +R PR++PP + G AWG P+ +NN+ET VP I+ G +W+ I GTK+ Sbjct: 317 QRGFPRARPPRLSEVGGGAWGYPSNLNNIETYACVPPIIEKGADWFLGIGTPGSPGTKVF 376 Query: 251 GFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPME 310 +G+V N GL E+P G T REI+++ GG+ + KFKA Q GG + E +LDLP++ Sbjct: 377 SLAGKVNNTGLVEVPMGITLREIVDEIGGGILNNRKFKAIQTGGPSGGCIPEQYLDLPVD 436 Query: 311 FESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRA 370 F+S+ + GS +G+ + +D MV + + F ESCG C PCR G ++I+ Sbjct: 437 FDSLWQVGSMMGSGGMVVMDESDCMVDIAKFFLAFCQSESCGKCPPCRVGTYQMLQIMER 496 Query: 371 LERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNT 430 + GEGQPGDIE LE+L +G G + C A P+ + ++YFREE+E I + Sbjct: 497 ITSGEGQPGDIERLEKLIETVGEG-SLCGLGRSAPNPVATTLRYFREEYEEHIHDKYCRA 555 Query: 431 HLINGI 436 ++ +G+ Sbjct: 556 NVCSGM 561 >UniRef50_Q608Y1 NADH dehydrogenase I, F subunit n=4 Tax=Gammaproteobacteria RepID=Q608Y1_METCA Length = 427 Score = 534 bits (1375), Expect = e-150, Method: Composition-based stats. Identities = 253/421 (60%), Positives = 322/421 (76%), Gaps = 2/421 (0%) Query: 12 PLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGL 71 PLT ++ D V L EY + GYEG +K L +P ++ +VKD+GL+GRGGAGF TGL Sbjct: 4 PLTRNIKSDGSTVTLAEYLASGGYEGLKKTLAEFAPLDVQQRVKDSGLRGRGGAGFPTGL 63 Query: 72 KWSLMP-KDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYI 130 KWS +P + + +YL+ N DEMEPG +KDRLL+E PH L+EG++I+A+A++A Y+ Sbjct: 64 KWSFVPMGEGAPRTKYLVVNGDEMEPGAFKDRLLLEGDPHQLIEGVVIAAYAIQANIAYV 123 Query: 131 FLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSL 190 FLRGEY AA LR+AIAEA GLLG++I+G+GF +L +HT AGRYICGEETAL+NSL Sbjct: 124 FLRGEYRLAAARLRQAIAEAEAQGLLGEDILGSGFSLDLRLHTSAGRYICGEETALLNSL 183 Query: 191 EGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLM 250 EG+RANPR+KPPFP SG +GKPT VNNVETLCN+P IL NGVEWY+ +S++ + GTK+ Sbjct: 184 EGKRANPRAKPPFPQVSGLFGKPTIVNNVETLCNLPHILRNGVEWYKGLSRTGEPGTKIY 243 Query: 251 GFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPME 310 G SGRV++PG WELP GTTAREI+E++AGGMRDG + K + PGGA TDFL HLD+PM+ Sbjct: 244 GVSGRVRSPGAWELPMGTTAREIIEEHAGGMRDGYRLKGYLPGGASTDFLLPEHLDIPMD 303 Query: 311 FESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRA 370 + SIGKAGSRLGT + +D + V +V NLE FFA+ESCGWCTPCRDGLPW+V +L Sbjct: 304 YGSIGKAGSRLGTGTMILLDDKTCPVQMVLNLERFFAQESCGWCTPCRDGLPWTVSLLEG 363 Query: 371 LERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNT 430 L G G+P D+ETLE+LC LGPG TFCA APGA+EPLQSA+K+FR +FE + QP + Sbjct: 364 LIEGRGRPEDLETLERLCGLLGPGNTFCALAPGAMEPLQSALKHFRADFERYL-QPQTTR 422 Query: 431 H 431 Sbjct: 423 G 423 >UniRef50_A8MJ02 NADH dehydrogenase (Quinone) n=4 Tax=Bacteria RepID=A8MJ02_ALKOO Length = 631 Score = 530 bits (1366), Expect = e-149, Method: Composition-based stats. Identities = 175/430 (40%), Positives = 261/430 (60%), Gaps = 2/430 (0%) Query: 15 WRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWS 74 R P ++EY + +GY+ K LT ++P+++V ++K +GL+GRGG GF TG+KW Sbjct: 155 LRNCGLINPEDINEYIAFDGYKALAKTLTTMTPEDVVAEIKASGLRGRGGGGFPTGMKWD 214 Query: 75 LMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRG 134 K E +Y++CNADE +PG + DR ++E P+ L+E M+IS +A+ A GY+++R Sbjct: 215 FTAKAEG-KEKYVVCNADEGDPGAFMDRSILEGDPNALIEAMIISGYAVGAQWGYVYVRA 273 Query: 135 EYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRR 194 EY A L AI +A E GLLG NI+GT F F++ + GAG ++CGEETAL+NS+EG+R Sbjct: 274 EYPIAVGRLDLAIKQAREKGLLGSNILGTDFSFDMEIRLGAGAFVCGEETALLNSIEGKR 333 Query: 195 ANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSG 254 PR +PPFPA G WGKPT +NNVET N+P I+ +G E + K GTK+ G Sbjct: 334 GMPRPRPPFPAVKGLWGKPTLINNVETFANIPQIILHGAEEFIKTGTEKSKGTKVFALGG 393 Query: 255 RVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESI 314 ++ + GL E+P GTT REI+ + GG+ +G FKA Q GG ++ HLD P++++++ Sbjct: 394 KINHTGLVEIPMGTTLREIVYEIGGGIPNGKAFKAVQTGGPSGGCISVEHLDTPIDYDNL 453 Query: 315 GKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERG 374 GS +G+ + +D + MV + R +F ESCG CTPCR+G ++IL + G Sbjct: 454 IALGSMMGSGGMIVMDEDNCMVDIARFFLDFTVDESCGKCTPCREGTKRMLEILERITEG 513 Query: 375 EGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLIN 434 +G+ GDIE LE L + + + C A P+ S +KYFR E+EA I+ L Sbjct: 514 KGKEGDIERLESLAQSIKI-SSLCGLGQTAPNPILSTLKYFRHEYEAHIQDKKCPAGLCK 572 Query: 435 GIQPNLLKER 444 + + E+ Sbjct: 573 ALLEFYITEK 582 >UniRef50_Q2LYA9 NADH:ubiquinone oxidoreductase, NADH-binding subunit n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LYA9_SYNAS Length = 637 Score = 527 bits (1357), Expect = e-148, Method: Composition-based stats. Identities = 180/433 (41%), Positives = 266/433 (61%), Gaps = 3/433 (0%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 + R P +DEY ++ GY KALT +SP++++ +VK +GL+GRGG GF TG K Sbjct: 158 IALRNCGMIDPENMDEYIARGGYTALHKALTTMSPEDVILEVKTSGLRGRGGGGFPTGTK 217 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 W + E I+Y++CN DE +PG Y DR LME PH ++EGM+I A+A+ A+ GYI++ Sbjct: 218 WESCRRAEGE-IKYVICNGDEGDPGAYMDRSLMEGDPHSVLEGMIIGAYAIGAHEGYIYV 276 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 R EY A NL+ AI +A EAGLLGKNI+GTGF+F++ + GAG ++CGE TAL+ SLEG Sbjct: 277 RNEYPLAVANLQHAIGQAREAGLLGKNILGTGFEFDIKIAKGAGAFVCGESTALMASLEG 336 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGF 252 + PR+K G W +P+ +NNVET NVP I+A G +W+ I GTK+ Sbjct: 337 KAGEPRAKYIHTVEQGLWNRPSNLNNVETWANVPVIIARGGQWFSGIGVKHSTGTKVFSL 396 Query: 253 SGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFE 312 G++ N GL E+P G ++I+ + GG+ G KFKA Q GG + + +DLP++F+ Sbjct: 397 VGKINNIGLVEVPMGIPLKDIIYEIGGGIPGGRKFKAVQTGGPSGGCIPDTMIDLPVDFD 456 Query: 313 SIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALE 372 S+ +AGS +G+ + +D + MV + R EF ESCG C PCR+G+ +IL+ + Sbjct: 457 SLWEAGSMMGSGGMIVMDDKTCMVDIARYFIEFLVSESCGKCVPCREGIYRMNEILQDIC 516 Query: 373 RGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHL 432 G+G+ GD+E L ++ + G + CA A P+ S I+YFR E++A I+ + Sbjct: 517 AGKGRRGDLELLGRMAEAIKDG-SLCALGGSAPNPVLSTIRYFRSEYDAHIRSKKCPAGV 575 Query: 433 ING-IQPNLLKER 444 IQ N+ KE+ Sbjct: 576 CKALIQYNIDKEK 588 >UniRef50_A3DCA0 NADH dehydrogenase (Quinone) n=10 Tax=cellular organisms RepID=A3DCA0_CLOTH Length = 597 Score = 526 bits (1354), Expect = e-148, Method: Composition-based stats. Identities = 172/438 (39%), Positives = 259/438 (59%), Gaps = 3/438 (0%) Query: 8 PETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGF 67 + + R P +DEY + +GY+ K LT ++P+++V+ +K +GL+GRGG GF Sbjct: 112 AKQQRIALRNCGVINPENIDEYIAFDGYKALAKVLTEMTPEQVVDVIKRSGLRGRGGGGF 171 Query: 68 STGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYR 127 TGLKW K ++ + +Y+ CNADE +PG + DR ++E PH ++E M I+ +A+ A + Sbjct: 172 PTGLKWEFAMKQDA-DQKYVCCNADEGDPGAFMDRSVLEGDPHSVIEAMAIAGYAIGANQ 230 Query: 128 GYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALI 187 GY+++R EY A L AI +A E GLLGKNI GT F F++ + GAG ++CGEETAL+ Sbjct: 231 GYVYVRAEYPIAVKRLGIAIQQAREYGLLGKNIFGTDFSFDVDIRLGAGAFVCGEETALM 290 Query: 188 NSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGT 247 S+EG R PR +PPFPA G W KPT +NNVET N+P I+ G EW+ +I K GT Sbjct: 291 TSIEGHRGEPRPRPPFPAVKGLWQKPTLLNNVETYANIPQIILKGPEWFASIGTEKSKGT 350 Query: 248 KLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDL 307 K+ G++ N GL E+P GTT RE++ D GG+ +G KFKA Q GG + +H+D Sbjct: 351 KVFAVGGKINNTGLVEIPMGTTLREVIYDIGGGIPNGKKFKAAQTGGPSGGCIPASHIDT 410 Query: 308 PMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKI 367 P++++S+ + GS +G+ + +D + MV + + EF ESCG C PCR G +I Sbjct: 411 PIDYDSLTQLGSMMGSGGLIIMDEDTCMVDIAKFFLEFTVDESCGKCPPCRIGTKRMYEI 470 Query: 368 LRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPF 427 L + G+G+ GDIE LE L + + C A P+ S ++YFR E+ ++ Sbjct: 471 LERITEGKGEEGDIEKLEMLAKNI-KASALCGLGQTAPNPILSTLRYFRHEYIEHVRDKK 529 Query: 428 SNTHLING-IQPNLLKER 444 + + + E+ Sbjct: 530 CAAGVCKALMHYEIDAEK 547 >UniRef50_D0LDB1 NADH-quinone oxidoreductase, F subunit n=45 Tax=Bacteria RepID=D0LDB1_GORB4 Length = 706 Score = 520 bits (1339), Expect = e-146, Method: Composition-based stats. Identities = 199/419 (47%), Positives = 271/419 (64%), Gaps = 5/419 (1%) Query: 8 PETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGF 67 PET P+ R + LD Y NGY+G RKAL PD+I+ +K +GL+GRGGAGF Sbjct: 269 PETIPVLSRHWQEPDSWTLDNYLQHNGYQGLRKALDTP-PDDIIELIKASGLRGRGGAGF 327 Query: 68 STGLKWSLMPK--DESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKA 125 G+KWS +P+ D YL+ NADE EPGT KD LM PH LVEG++I+A+A++A Sbjct: 328 PVGMKWSFIPQSDDPDAPPHYLVVNADESEPGTCKDMPLMLASPHSLVEGVIIAAYAIRA 387 Query: 126 YRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETA 185 + +I++RGE LR A+ +A AG LG++I+G+GFD EL VH GAG YICGEETA Sbjct: 388 HHAFIYVRGEVASVIRRLRTAVDDAYAAGYLGRDILGSGFDLELVVHAGAGAYICGEETA 447 Query: 186 LINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDA 245 L++SLEGRR PR +PPFPA +G + PT VNNVE++ +VP I+ NGV+W++++ K Sbjct: 448 LLDSLEGRRGQPRLRPPFPAVAGLYASPTVVNNVESIASVPPIIRNGVDWFRSMGTEKSP 507 Query: 246 GTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHL 305 G L SG V+ PG +E G T RE+L D AGG+R G + K W PGG+ T LT HL Sbjct: 508 GFTLYSLSGHVERPGQYEAALGVTLRELL-DRAGGVRAGHQLKFWTPGGSSTPLLTAEHL 566 Query: 306 DLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSV 365 D+P+++E +G AGS LGT D +V V +F+A ESCG CTPCR+G W V Sbjct: 567 DVPLDYEGVGAAGSMLGTKALQIFDETTCVVGAVLRWTQFYAHESCGKCTPCREGTYWLV 626 Query: 366 KILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIK 424 ++L+ LE G D++TL + + GK+FCA GA P+ S++KYFR+E++A + Sbjct: 627 QLLKRLETEGGTTADLDTLADVTNSI-VGKSFCALGDGAGSPIVSSLKYFRDEYDAHLA 684 >UniRef50_Q39TW5 Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit n=5 Tax=cellular organisms RepID=Q39TW5_GEOMG Length = 635 Score = 518 bits (1335), Expect = e-145, Method: Composition-based stats. Identities = 164/424 (38%), Positives = 251/424 (59%), Gaps = 4/424 (0%) Query: 22 QPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDES 81 +D+Y + GY K L ++P++++ ++K + L+GRGG GF KW ++ Sbjct: 147 DSKSMDDYLAIGGYSALSKVLFQMTPEDVMGEIKKSNLRGRGGGGFPAWRKWE-ESRNAP 205 Query: 82 MNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAV 141 I+Y++ NADE +PG + DR L+E PH ++EG++I A+A+ A+ G+I++R EY A Sbjct: 206 DPIKYVIVNADEGDPGAFMDRALIEGNPHSILEGLIIGAYAVGAHEGFIYVRQEYPLAVE 265 Query: 142 NLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKP 201 N+ AI +A+E G +GK+I+G+GFDF + VH GAG ++CGE +AL+ +LEGR PR K Sbjct: 266 NINLAIRQASERGFVGKDILGSGFDFTVKVHMGAGAFVCGESSALMTALEGRAGEPRPKY 325 Query: 202 PFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGL 261 A G W P+ +NNVET NV I+ G +W+ + + GTK+ G++ N GL Sbjct: 326 IHTAVKGVWDHPSVLNNVETWANVTQIITKGADWFTSYGTAGSTGTKIFSLVGKITNTGL 385 Query: 262 WELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRL 321 E+P G T R+I+ GG+ G KFKA Q GG + EA LDLP++F+ + KAGS + Sbjct: 386 VEVPMGVTLRDIITKVGGGIPGGKKFKAVQTGGPSGGCIPEAMLDLPVDFDELTKAGSMM 445 Query: 322 GTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDI 381 G+ + +D + MV + R +F ESCG CTPCR+G+ + +L + G+G+ GDI Sbjct: 446 GSGGMIVMDEDTCMVDIARYFIDFLKDESCGKCTPCREGIRQMLAVLTRITVGKGKEGDI 505 Query: 382 ETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLING-IQPNL 440 E LE+L G CA A P+ S I+YFR+E+EA I++ I ++ Sbjct: 506 ELLEELAE--STGAALCALGKSAPNPVLSTIRYFRDEYEAHIREKKCPALSCKEMIAFHI 563 Query: 441 LKER 444 E+ Sbjct: 564 DPEK 567 >UniRef50_Q39QB2 NADH dehydrogenase I, F subunit n=5 Tax=Bacteria RepID=Q39QB2_GEOMG Length = 591 Score = 518 bits (1333), Expect = e-145, Method: Composition-based stats. Identities = 169/422 (40%), Positives = 250/422 (59%), Gaps = 2/422 (0%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 + P LD Y +++G++ K + ++P ++++VK AGL+GRGG GF TG+K Sbjct: 114 IVMTGCGQIDPESLDAYLAEDGFKAIEKCVKEMTPAAVIDEVKKAGLRGRGGGGFPTGMK 173 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 WS ++YL+CNADE +PG + DR ++E P+ ++EGM+I+A+A+ +GY+++ Sbjct: 174 WSF-CAATPGKLKYLICNADEGDPGAFMDRSILEGDPYCIIEGMMIAAYAIGCSKGYVYV 232 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 R EY A L++A+ E G LG NI G GFDF+L + GAG ++CGEETAL+ S+EG Sbjct: 233 RAEYPLAIERLQKALDVCREKGYLGHNIQGWGFDFDLIIKKGAGAFVCGEETALMASIEG 292 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGF 252 R PR +PPFPA G W KPT +NNVET NV I+ G EWY ++ GTK+ Sbjct: 293 ERGMPRPRPPFPAVKGLWAKPTNINNVETFANVRHIINKGAEWYASLGTDTTKGTKIFAV 352 Query: 253 SGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFE 312 +G+VK+ GL E+P G T R+++ + GG+ + KFKA Q GG + LD P++++ Sbjct: 353 TGKVKHTGLVEVPAGMTVRDVIYNVCGGIANNRKFKAVQAGGPSGGCIPPEVLDTPVDYD 412 Query: 313 SIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALE 372 S+ KAG+ +G+ + +D MV + R F ESCG C PCR GL + IL + Sbjct: 413 SLIKAGAMMGSGGLVVMDETTCMVDVARFFLSFTRMESCGKCVPCRIGLKVMLDILERIT 472 Query: 373 RGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHL 432 G GQ GDIETL ++ + + C A P+ S I+YFREE+EA I ++ Sbjct: 473 AGRGQAGDIETLLEMGSTIKKA-SLCGLGQTAPNPILSTIRYFREEYEAHITDKRCPSNC 531 Query: 433 IN 434 Sbjct: 532 CK 533 >UniRef50_Q1DDC8 NADH dehydrogenase I, F subunit n=5 Tax=Bacteria RepID=Q1DDC8_MYXXD Length = 446 Score = 517 bits (1331), Expect = e-145, Method: Composition-based stats. Identities = 188/440 (42%), Positives = 260/440 (59%), Gaps = 12/440 (2%) Query: 1 MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLK 60 M + +T E P+ Q LD YR + GYE +KAL + P I+++VK + L+ Sbjct: 1 MASTAKTIE--PIISAAWGKPQSWTLDSYRKRGGYEALKKAL-QMEPAAIIDEVKKSNLR 57 Query: 61 GRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISA 120 GRGGAGF TGLKWS +PKD S +YL N DE EPGT+KDR ++E PH+++EG+ I++ Sbjct: 58 GRGGAGFPTGLKWSFVPKD-SPKPKYLAVNGDESEPGTFKDRYILEDDPHMMLEGIAIAS 116 Query: 121 FALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYIC 180 +AL + Y++LRGE+ A + AI EA +AG+ GK ++G ++ ++ GAG YIC Sbjct: 117 YALGVHTCYVYLRGEFKFPAERTQAAIDEAYKAGIFGKKVLGKDYELNCYLVRGAGAYIC 176 Query: 181 GEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNIS 240 GEETAL+ SLEG++ PR KPPFPA G +G PT VNNVETL +VPAI G E Y + Sbjct: 177 GEETALLESLEGKKGWPRLKPPFPAVVGLFGCPTVVNNVETLASVPAIFQQGAEAYAKLG 236 Query: 241 KSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILED--YAGGMRDGLKFKAWQPGGAGTD 298 K GT+L+ SG V PG++E+ TT E++ D Y GM G K KA PGG+ Sbjct: 237 TDKSGGTRLVCLSGTVNRPGVYEVSMFTTLSELIFDDKYGRGMPAGRKVKAVIPGGSSAP 296 Query: 299 FLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCR 358 L LD+ MEFE++ + G+ + +D MV + + F+A ESCG CTPCR Sbjct: 297 VLGADELDVAMEFEALKVKQTMAGSGGVIVMDDTTCMVRSLWRVARFYAEESCGQCTPCR 356 Query: 359 DGLPWSVKILRALERGEGQPGDIETLEQLCRFLGP------GKTFCAHAPGAVEPLQSAI 412 +G PW ++LR +E G G+PGDI+ L + + P G T CA A P S + Sbjct: 357 EGTPWQTRLLRKIEEGRGEPGDIDMLSNVASSIAPYPPIGLGNTICALGDAAALPTHSFL 416 Query: 413 KYFREEFEAGIKQPFSNTHL 432 FR+EFEA I++ Sbjct: 417 MRFRDEFEAHIREHRCPFGD 436 >UniRef50_B8FFJ2 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=8 Tax=Bacteria RepID=B8FFJ2_DESAA Length = 1044 Score = 514 bits (1323), Expect = e-144, Method: Composition-based stats. Identities = 170/423 (40%), Positives = 255/423 (60%), Gaps = 2/423 (0%) Query: 14 TWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKW 73 L P ++ Y + GY+ + L+G++P+++ +V DA L+GRGGAGF GLKW Sbjct: 138 VLALCGRIDPTSIEHYIAAGGYQALVRVLSGMAPEQVAQEVIDAKLRGRGGAGFPAGLKW 197 Query: 74 SLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLR 133 + S N +Y++CNADE +PG + DR ++E PH ++EGM+I AFA+ A G+I++R Sbjct: 198 KFARQS-SANPKYIICNADEGDPGAFMDRAILEGDPHSVIEGMIIGAFAMGARYGFIYVR 256 Query: 134 GEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGR 193 EY A +L AIA+A E G+LG+NI+GTGF F L + GAG ++CGEETAL+ S+EG+ Sbjct: 257 EEYPIAVEHLNCAIAQAGELGILGENILGTGFSFSLSLKMGAGAFVCGEETALMASIEGK 316 Query: 194 RANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFS 253 R PR++PPFPA SG GKP+ +NNVET NVP IL NG WY + GTK+ + Sbjct: 317 RGMPRARPPFPAQSGVDGKPSNINNVETFANVPLILKNGAGWYAQVGTENSKGTKIFSLA 376 Query: 254 GRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFES 313 G+V N GL E+P GT+ RE++ D GG+ G KFKA Q GG + L+L +++++ Sbjct: 377 GKVNNTGLVEVPIGTSIREVVFDIGGGIPKGRKFKAVQMGGPSGGCVPAQFLNLSIDYDT 436 Query: 314 IGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALER 373 + K G+ +G+ + +D MV + R F ESCG C+PCR G ++IL + Sbjct: 437 LQKIGAIMGSGGMVVMDENNCMVEIARFFLAFTQSESCGKCSPCRLGTTQLLEILTRITT 496 Query: 374 GEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLI 433 G G+ DIET++++ R + + C +P S ++YF +E+E I + + Sbjct: 497 GRGRLEDIETIKEIGRTMTEA-SLCGLGQNCAKPAISTLQYFLKEYEDHILENRCAGAVC 555 Query: 434 NGI 436 + Sbjct: 556 KSM 558 >UniRef50_D1CCD0 NADH dehydrogenase (Quinone) n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCD0_THET1 Length = 580 Score = 513 bits (1321), Expect = e-144, Method: Composition-based stats. Identities = 163/424 (38%), Positives = 237/424 (55%), Gaps = 2/424 (0%) Query: 11 HPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTG 70 H + + P L++Y + G+ KAL +S DEI+ +VK + L+GRGGAGF G Sbjct: 140 HRILLANCGWQNPESLEDYLALGGFSALEKALFEMSQDEIIAEVKASNLRGRGGAGFPAG 199 Query: 71 LKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYI 130 +KW + E +Y++ NA E EP +KDR L+E P+ ++EG++I+A+A+ GYI Sbjct: 200 IKWES-ARSERNRPKYVIVNAHEGEPNVFKDRRLIEGDPYAVIEGLMIAAWAVGVNDGYI 258 Query: 131 FLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSL 190 ++ EY A L RAI + GLLGK+I+G+GFDF++ V GAG YI GE +A I + Sbjct: 259 YVGSEYPLAMERLNRAIRRMHQVGLLGKDILGSGFDFDIKVVPGAGAYISGEASAAIYGI 318 Query: 191 EGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLM 250 +G++ PR+KPP A +G WGKPT VNNVETL NVP I+ G +W+ +I GTK+ Sbjct: 319 QGQKGFPRTKPPRSAEAGLWGKPTVVNNVETLANVPHIINKGAQWFASIGTENSTGTKVF 378 Query: 251 GFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPME 310 +G + + L E G T R++L GGMR+G KFKA GG L E+ LDL E Sbjct: 379 SLAGDINHVSLVEADMGITMRDLLFVAGGGMRNGAKFKAVLAGGISGGALPESTLDLTNE 438 Query: 311 FESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRA 370 F ++ GS +G+ + D MV L F ESCG C PCR G + +L Sbjct: 439 FGTLEAEGSMMGSGGYIIYDENTCMVDLAFYCTRFNRDESCGKCVPCRIGTSAQLAMLDR 498 Query: 371 LERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNT 430 + +G G+ DI+ L Q + + C A P+ S +++FR+E EA I++ Sbjct: 499 IMKGLGEEIDIDRLTQSSEDI-IAYSLCGLGQAAPIPVLSVLRHFRDEVEAHIREKRCPA 557 Query: 431 HLIN 434 + Sbjct: 558 GVCR 561 >UniRef50_B1ZTP3 NADH dehydrogenase (Quinone) n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZTP3_OPITP Length = 668 Score = 513 bits (1321), Expect = e-144, Method: Composition-based stats. Identities = 175/421 (41%), Positives = 259/421 (61%), Gaps = 4/421 (0%) Query: 6 RTPETHP-LTWRLRDDKQPVWLDEYRSK-NGYEGARKALTGLSPDEIVNQVKDAGLKGRG 63 +TPE + R + P +++Y GY+ RKAL L+P++++ ++K +GL+GRG Sbjct: 214 KTPERQARIVLRNCGEVDPDSVEDYLRHAQGYQALRKALFELTPEKVIGELKASGLRGRG 273 Query: 64 GAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFAL 123 GAGF T +KW L + RY++CN DE +PG + DR ++E PH ++EGM+++ FA+ Sbjct: 274 GAGFPTWMKWQLTRAQPAEQ-RYVICNGDEGDPGAFMDRSVLESDPHSVLEGMILAGFAM 332 Query: 124 KAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEE 183 A RGY ++R EY +A + RAIA+A EAGLLG+NI+G+GF F + GAG ++CGEE Sbjct: 333 GASRGYFYIRAEYPKAVERVERAIAQAREAGLLGENILGSGFSFNAKIRLGAGAFVCGEE 392 Query: 184 TALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSK 243 TALI S+EGRR +P +PP+P+ G WG+PT +NNVETL N+PAIL G WY K Sbjct: 393 TALIASIEGRRGSPSPRPPYPSVRGLWGRPTAINNVETLANIPAILLRGGAWYAGYGTEK 452 Query: 244 DAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEA 303 GTK+ +G+V N L E+P GTT R+I+ + GG+ D + KA Q GG + E Sbjct: 453 SKGTKVFAVTGKVMNAQLVEVPMGTTLRQIVYEICGGVLDDKEIKAVQTGGPSGGVIPEK 512 Query: 304 HLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPW 363 HLD P+ +E++ + GS +G+ + +D +MV + R F ESCG C PCR G Sbjct: 513 HLDTPVSYETLQQLGSIMGSGGMLVMDKNDSMVDVARFYLRFCVDESCGKCAPCRIGGYQ 572 Query: 364 SVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGI 423 ++IL + RG G D+ TL ++C + + C A P+ S ++YF EE++A I Sbjct: 573 MLQILDRISRGRGSAEDLVTLRRICTAMQKA-SLCGLGQTAPNPVLSTLRYFEEEYKAYI 631 Query: 424 K 424 + Sbjct: 632 E 632 >UniRef50_O27592 NADP-reducing hydrogenase, subunit C n=5 Tax=cellular organisms RepID=O27592_METTH Length = 630 Score = 512 bits (1319), Expect = e-144, Method: Composition-based stats. Identities = 169/430 (39%), Positives = 253/430 (58%), Gaps = 4/430 (0%) Query: 15 WRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWS 74 R P + Y + GY G +AL + PDE++ +VKD+GL+GRGGAGF T LKWS Sbjct: 137 LRRCGLIDPENMGHYLATGGYRGLMRAL-EMEPDEVIEEVKDSGLRGRGGAGFPTWLKWS 195 Query: 75 LMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRG 134 L + E+ ++YL+CNADE +PG + +R L+E PH L+EG+LI+++A+ A YI+ R Sbjct: 196 LCRQ-EASEVKYLICNADEGDPGAFMNRSLIEGDPHALLEGILIASYAVGAREAYIYCRA 254 Query: 135 EYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRR 194 EY A LR AI++ GLLGK+I+G+GFD ++ + GAG ++CGEETALI+S+EG+R Sbjct: 255 EYPLALERLRVAISDLRNLGLLGKDILGSGFDLDIKIKEGAGAFVCGEETALISSIEGKR 314 Query: 195 ANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSG 254 PR++PPFP T G WGKPT +NNVETL V I+ +G +++ ++ + GTK G Sbjct: 315 GMPRTRPPFPTTRGLWGKPTVINNVETLAAVSMIMQHGADYFNSLGTPESRGTKTFSLVG 374 Query: 255 RVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESI 314 V+ GL E+P GTT RE++ D GG+ DG + KA Q GG L +D ++++S+ Sbjct: 375 DVRRTGLIEVPLGTTLREVIFDIGGGVVDG-ELKAVQIGGPSGGCLPAELIDTGIDYDSL 433 Query: 315 GKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERG 374 AG+ +G+ + + MV L R EF RESCG C PCR G + IL + G Sbjct: 434 TSAGAIMGSGGLVVLSDRTCMVELARYFLEFTQRESCGKCVPCRVGTRQMLMILNDIVEG 493 Query: 375 EGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLIN 434 G+P D + L + + + C + P+ + ++YF +E+ IK + Sbjct: 494 SGRPEDPDILRDVAESV-RAASLCGLGQTSPNPVLTTLRYFEDEYHDHIKGRCTAAACSE 552 Query: 435 GIQPNLLKER 444 + + E+ Sbjct: 553 LMHYMIDPEK 562 >UniRef50_Q9XAQ9 NADH-quinone oxidoreductase subunit F n=56 Tax=Bacteria RepID=NUOF_STRCO Length = 449 Score = 511 bits (1315), Expect = e-143, Method: Composition-based stats. Identities = 195/418 (46%), Positives = 268/418 (64%), Gaps = 4/418 (0%) Query: 12 PLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGL 71 P+ D+ + LD YR GYEG RKAL ++PD+++ VK++GL+GRGGAGF TG+ Sbjct: 19 PVLSAFWDEDESWTLDVYRRHEGYEGLRKALA-MAPDDLIAYVKESGLRGRGGAGFPTGM 77 Query: 72 KWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIF 131 KW +P+ + YL+ NADE EPGT KD L+ PH L+EG++I+ +A+++ +I+ Sbjct: 78 KWQFIPQGDG-KPHYLVVNADESEPGTCKDIPLLFANPHSLIEGIVIACYAIRSSHAFIY 136 Query: 132 LRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLE 191 LRGE + L A+ EA AG LG+NI+G+G D L VH GAG YICGEETAL++SLE Sbjct: 137 LRGEVVPVLRRLHEAVREAYAAGFLGENILGSGLDLTLTVHAGAGAYICGEETALLDSLE 196 Query: 192 GRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMG 251 GRR PR +PPFPA +G + PT VNNVE++ +VPAIL G +W++++ K G L Sbjct: 197 GRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPAILNKGKDWFRSMGSEKSPGFTLYS 256 Query: 252 FSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEF 311 SG V PG +E P G T R++L D +GGMR G + K W PGG+ T T+ HLD+P+++ Sbjct: 257 LSGHVAGPGQYEAPLGITLRQLL-DMSGGMRPGHRLKFWTPGGSSTPMFTDEHLDVPLDY 315 Query: 312 ESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRAL 371 E +G AGS LGT D +V V EF+A ESCG CTPCR+G W V++LR + Sbjct: 316 EGVGAAGSMLGTKALQCFDETTCVVRAVTRWTEFYAHESCGKCTPCREGTYWLVQLLRDI 375 Query: 372 ERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSN 429 E G+GQ D++ L + + GK+FCA GA P+ S++KYFREE+E I Sbjct: 376 EAGKGQMSDLDKLNDIADNIN-GKSFCALGDGAASPIFSSLKYFREEYEEHITGRGCP 432 >UniRef50_A6FCN1 NuoF2 NADH I CHAIN F n=1 Tax=Moritella sp. PE36 RepID=A6FCN1_9GAMM Length = 425 Score = 508 bits (1308), Expect = e-142, Method: Composition-based stats. Identities = 191/421 (45%), Positives = 266/421 (63%), Gaps = 3/421 (0%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 + + ++ Y GY+G +K LT SPD++++ VK + L+GRGGAGF TGLK Sbjct: 5 VLLKYITHPDSTNIEFYEKTGGYQGLKKILTTYSPDKVIDAVKASNLRGRGGAGFPTGLK 64 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 WS +PKD+ I YL CNADE EPGT+KDRLLME+ PH ++EGM+I+A+A++A YI++ Sbjct: 65 WSFVPKDDG-KIHYLCCNADEGEPGTFKDRLLMERDPHRVIEGMIIAAYAIRAEVAYIYI 123 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 RGEY + + +AI A G LGKNI T F ++VH GAG YICGEETAL+ S+EG Sbjct: 124 RGEYGLSIDMITQAIKAAYAKGYLGKNIFNTDFCLNIYVHKGAGAYICGEETALLESIEG 183 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGF 252 RR P+ KPPFPA SG + PT +NNVET V I A GV+W+ +I G +L G Sbjct: 184 RRGQPKLKPPFPAVSGLYDCPTVINNVETFVCVTHIFAKGVDWFTSIGPDDAPGPRLFGL 243 Query: 253 SGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFE 312 SG+++NPG+ ELP G E++ DY GG G KFKA PGG + A LD+ M F Sbjct: 244 SGQLQNPGIVELPMGLPLSELVYDYGGGPLTG-KFKAVIPGGLSAPMIPLAGLDVKMNFA 302 Query: 313 SIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALE 372 + A S +G+A +A+D ++ ++ R + EFF+ ESCG C PCR+GLPW+ KIL +E Sbjct: 303 DLATADSMMGSAAVIALDETASIPAVGRRIAEFFSHESCGKCAPCREGLPWASKILNRIE 362 Query: 373 RGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHL 432 G+G+PGD+E L+ +C + +FCA GA +++ +K+F E++A I Q Sbjct: 363 SGQGRPGDLEQLQVICGGVFN-NSFCALGVGAAWAIRATLKHFPHEYDALITQQKIPIRD 421 Query: 433 I 433 Sbjct: 422 R 422 >UniRef50_A5FKK2 NADH dehydrogenase subunit F n=18 Tax=Bacteria RepID=A5FKK2_FLAJ1 Length = 456 Score = 508 bits (1307), Expect = e-142, Method: Composition-based stats. Identities = 195/415 (46%), Positives = 255/415 (61%), Gaps = 15/415 (3%) Query: 25 WLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNI 84 + YR GY KAL L+PDE+ +VK +GL+GRGGAGF G+KWS + K +S Sbjct: 17 TYEVYRQNGGYASVEKALKTLTPDEVTEEVKKSGLRGRGGAGFPAGMKWSFIDK-KSGRP 75 Query: 85 RYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLR 144 R+L+CNADE EPGT+KDR LME +PHLL+EGM+ S++AL A YI++RGEY+ L Sbjct: 76 RHLVCNADESEPGTFKDRFLMEYIPHLLIEGMITSSYALGANLSYIYIRGEYMWVFKILE 135 Query: 145 RAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFP 204 RAIAEA AG LGKNI+G+G+D EL VH GAG YICGEETALI SLEG+R NPR KPPFP Sbjct: 136 RAIAEAKAAGWLGKNILGSGYDLELHVHCGAGAYICGEETALIESLEGKRGNPRIKPPFP 195 Query: 205 ATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWEL 264 A SG W PT VNNVET+ VP I+ N + Y I + GTKL+ SG +KNPG++E+ Sbjct: 196 AVSGLWANPTVVNNVETIATVPWIVNNSGDDYAKIGIGRSTGTKLISASGHIKNPGVYEI 255 Query: 265 PFGTTAREIL--EDYAGGMRDGLKFKAWQPGGAGTDFLTEAHL-------DLPMEFESIG 315 G + E + ++Y GGM KA+ PGG+ L + D M +ES+ Sbjct: 256 ELGLSVDEFMNSDEYLGGMSSSRPLKAFVPGGSSVPILPAELIFKTANGEDRLMTYESLS 315 Query: 316 ----KAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRAL 371 GS LG+ + + +V N F+ ESCG CTPCR+G W KIL + Sbjct: 316 DGGFATGSMLGSGGFIVYNDTACVVRNTWNFARFYHHESCGQCTPCREGTGWLEKILWRI 375 Query: 372 ERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQP 426 E G+G+ DIE L + + G T C A P+ +AI++FR+EFE ++ P Sbjct: 376 ENGQGREEDIELLWSIQSKI-EGNTICPLGDAASWPVAAAIRHFRDEFEYHVRFP 429 >UniRef50_A7NPE5 NADH-quinone oxidoreductase, F subunit n=9 Tax=Bacteria RepID=A7NPE5_ROSCS Length = 451 Score = 507 bits (1305), Expect = e-142, Method: Composition-based stats. Identities = 195/429 (45%), Positives = 265/429 (61%), Gaps = 5/429 (1%) Query: 7 TPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAG 66 +P + R D + D Y GYE R A+T +P +IV VKD+GL+GRGGAG Sbjct: 20 SPLAEHIVLRDLDIENIADFDVYLQHGGYEALRIAVTERTPADIVQTVKDSGLRGRGGAG 79 Query: 67 FSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAY 126 F TG+KW +PK + RYLLCN DE EPGT+ + ++++ PH L+EG+ ISA+A++A Sbjct: 80 FPTGVKWGFLPK--GVYPRYLLCNCDESEPGTFNNHQIIDRNPHQLIEGIAISAYAIEAN 137 Query: 127 RGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETAL 186 YI++RGE+ AA L RAIA+A G LG+NI GTG+D +++VH GAG YICGEETAL Sbjct: 138 LAYIYIRGEFAAAARRLERAIAQAYARGFLGRNIFGTGYDLDIYVHRGAGAYICGEETAL 197 Query: 187 INSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAG 246 + SLEG+ PR +PPFPA +G +GKPT +NNVETL NVP I+ +G WY+ K G Sbjct: 198 MESLEGKIGQPRLRPPFPAVAGLYGKPTIINNVETLTNVPMIVRHGAVWYRQFGTEKSPG 257 Query: 247 TKLMGFSGRVKNPGLWELPFGTTAREILE--DYAGGMRDGLKFKAWQPGGAGTDFLTEAH 304 TK+ SG VK PG +E PFGT RE++ +Y GMR K PGGA +LT Sbjct: 258 TKVFSVSGHVKRPGNYEAPFGTPLRELIFSPEYCQGMRGNHNVKIVVPGGASAGWLTADD 317 Query: 305 LDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWS 364 LD+ M++E++ GS LG+ + +D +N V + ++EFF ESCG CTPCR+G + Sbjct: 318 LDVTMDYEALAAKGSMLGSGGVIVLDERVNAVEVAYKMDEFFKHESCGKCTPCREGTYFL 377 Query: 365 VKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIK 424 VK+L + G G+ DI L + + G FC AV P++SA++ F EFE I Sbjct: 378 VKVLHRITHGHGRQDDIPLLHDVYNQMA-GNCFCLLGESAVVPIRSALRLFPHEFERAIA 436 Query: 425 QPFSNTHLI 433 Q + H I Sbjct: 437 QAGNGRHDI 445 >UniRef50_Q56222 NADH-quinone oxidoreductase subunit 1 n=16 Tax=Bacteria RepID=NQO1_THET8 Length = 438 Score = 507 bits (1305), Expect = e-142, Method: Composition-based stats. Identities = 197/422 (46%), Positives = 274/422 (64%), Gaps = 7/422 (1%) Query: 8 PETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGF 67 P + + LD Y GYE A++ L +PDE++ +VK +GL+GRGGAGF Sbjct: 11 PRFERTLYAHVGKEGSWTLDYYLRHGGYETAKRVLKEKTPDEVIEEVKRSGLRGRGGAGF 70 Query: 68 STGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYR 127 TGLKWS MPKD+ YL+CNADE EPG++KDR ++E +PHLL+EGM+++ +A++A Sbjct: 71 PTGLKWSFMPKDDG-KQHYLICNADESEPGSFKDRYILEDVPHLLIEGMILAGYAIRATV 129 Query: 128 GYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALI 187 GYI++RGEY AA L +AI EA G LGKN+ GT F F+L VH GAG YICGEETAL+ Sbjct: 130 GYIYVRGEYRRAADRLEQAIKEARARGYLGKNLFGTDFSFDLHVHRGAGAYICGEETALM 189 Query: 188 NSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGT 247 NSLEG RANPR KPPFPA SG WGKPT +NNVETL +V I+ G +W+ + + G Sbjct: 190 NSLEGLRANPRLKPPFPAQSGLWGKPTTINNVETLASVVPIMERGADWFAQMGTEQSKGM 249 Query: 248 KLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLT--EAHL 305 KL SG VK PG++ELP GTT RE++ ++AGG + +A PGG+ T L E L Sbjct: 250 KLYQISGPVKRPGVYELPMGTTFRELIYEWAGGPLEP--IQAIIPGGSSTPPLPFTEEVL 307 Query: 306 DLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLP-WS 364 D PM +E + GS LGT + + ++MV + NL F+A ESCG CTPCR+G+ + Sbjct: 308 DTPMSYEHLQAKGSMLGTGGVILIPERVSMVDAMWNLTRFYAHESCGKCTPCREGVAGFM 367 Query: 365 VKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIK 424 V + + G+G+ D+E LE L + G++FC A AV P++ ++++F++++ A + Sbjct: 368 VNLFAKIGTGQGEEKDVENLEALLPLI-EGRSFCPLADAAVWPVKGSLRHFKDQYLALAR 426 Query: 425 QP 426 + Sbjct: 427 EK 428 >UniRef50_Q2FP97 NADH dehydrogenase (Quinone) n=2 Tax=Methanomicrobiales RepID=Q2FP97_METHJ Length = 562 Score = 506 bits (1304), Expect = e-142, Method: Composition-based stats. Identities = 169/411 (41%), Positives = 239/411 (58%), Gaps = 2/411 (0%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 + R P +DEY GY A KALT + PD I+++VK +GL+GRGGAGF GLK Sbjct: 150 VILRDSGLINPEDIDEYIGIGGYFAAYKALTSMKPDAIIDEVKRSGLRGRGGAGFPAGLK 209 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 W + K ++++CNADE +PG Y +R ME PH+L+EGMLI A+A+ G I++ Sbjct: 210 WEITKKAPGE-EKFIVCNADEGDPGAYMNRNEMESDPHMLLEGMLIGAYAMGVSEGLIYI 268 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 R EY A L A+ +A GLLGKNI TGFDF++ + TGAG ++CGE TAL S+EG Sbjct: 269 RAEYPLAIERLMLALDQARTYGLLGKNIFNTGFDFDIRIATGAGAFVCGESTALAASIEG 328 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGF 252 + PR +PP G +GKPT +NNVET CNVP I+A G WY +I + GTK+ Sbjct: 329 KTGRPRLRPPRLTEKGVFGKPTDLNNVETWCNVPVIIAKGALWYSSIGAKGNTGTKVFSL 388 Query: 253 SGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFE 312 G+V N G+ E+P GT+ I+ D G G + KA Q GG + D P++FE Sbjct: 389 VGKVDNIGMVEVPLGTSLHSIIYDIGNGGALGKEVKAVQTGGPSGGCIPVRLFDTPVDFE 448 Query: 313 SIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALE 372 S+ + G+ +G+ + +D + NMV + R F + ESCG C PCR+GL + IL + Sbjct: 449 SLNQVGTMMGSGGLVVMDEDTNMVDIARYFINFASGESCGKCVPCREGLKHMLLILNRIV 508 Query: 373 RGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGI 423 G+G DI L +L + + C A P+ + ++YF+EE++ I Sbjct: 509 AGKGTRQDIGLLRELAETVQK-TSLCGLGQTAPNPVLTTMQYFKEEYDDLI 558 >UniRef50_C1F9D7 NADH dehydrogenase I, F subunit n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F9D7_ACIC5 Length = 437 Score = 506 bits (1302), Expect = e-142, Method: Composition-based stats. Identities = 176/431 (40%), Positives = 246/431 (57%), Gaps = 4/431 (0%) Query: 1 MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLK 60 M + P+ P+ R + V +D Y GY RK L + PD I+N++K +GL+ Sbjct: 1 MAYLTTHPDVVPVVS-YRFGRGAVDIDRYIELEGYSSVRKCL-EMEPDAIINEMKTSGLR 58 Query: 61 GRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISA 120 GRGGAGF TG+KWS +PK +S +Y+L N DE EPGT KDRL+ E PH ++EG +I+ Sbjct: 59 GRGGAGFPTGMKWSFVPK-QSAKPKYVLVNGDESEPGTCKDRLIFEHDPHSVIEGTMIAG 117 Query: 121 FALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYIC 180 A+ A G+I+LRGEY + +A+A A G LGK I G+ DF++ V TGAG Y Sbjct: 118 LAIGAKMGFIYLRGEYRYLIQIMEKAVAAAYAKGFLGKGIFGSQHDFDVVVQTGAGAYEV 177 Query: 181 GEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNIS 240 GEE+AL+ SLEG+R PR KPPFPA G +G PT +NN ETL +VP I G Y Sbjct: 178 GEESALMESLEGKRGVPRIKPPFPAVVGLYGGPTVINNAETLASVPHIFRIGAAEYAKYG 237 Query: 241 KSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFL 300 ++ GT+L SG V+ PG++ELP G ++++ + AGG+ G K KA PGG+ L Sbjct: 238 TERNGGTRLFCISGHVEKPGVYELPMGYNLKKMIYEVAGGILGGKKLKAVVPGGSSVPVL 297 Query: 301 TEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDG 360 +D+ M+F+ + KAGS LG+ + +D + MV +F+ ESCGWC PCR+G Sbjct: 298 LPDEIDIGMDFDQVAKAGSMLGSGGVVVLDESVCMVEFALRTIKFYRHESCGWCIPCREG 357 Query: 361 LPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFE 420 W K + L G DI ++ + + G+TFC A P +K FR+EFE Sbjct: 358 TDWLQKSITRLHMGGAVDKDINNIQYIAENM-LGRTFCPLGDAAAMPTIGFVKKFRKEFE 416 Query: 421 AGIKQPFSNTH 431 + H Sbjct: 417 DHLNGKGCPYH 427 >UniRef50_Q2LS97 NADH-quinone oxidoreductase chain F n=2 Tax=Syntrophus aciditrophicus SB RepID=Q2LS97_SYNAS Length = 638 Score = 503 bits (1296), Expect = e-141, Method: Composition-based stats. Identities = 176/429 (41%), Positives = 257/429 (59%), Gaps = 5/429 (1%) Query: 8 PETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGF 67 +T LT ++ P+ +D Y K GY +KAL PD+++ VKD+GL+GRGGAGF Sbjct: 208 GQTQRLTEKI-GSIDPLSVDSYLEKGGYAAIKKALAEYQPDDVIAIVKDSGLRGRGGAGF 266 Query: 68 STGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYR 127 G+KWS +PK + +Y++CNADE EPGTYKDR+LME+ PH L+EGM++ +A A Sbjct: 267 PAGVKWSFLPKGDMQ--KYVICNADEGEPGTYKDRILMEENPHGLLEGMMLCGYATGATV 324 Query: 128 GYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALI 187 GYI++RGEY + L+RAI +A E G+LG NI G+ F F++F+ G G Y+CGEE++L+ Sbjct: 325 GYIYIRGEYRRSIERLQRAIDQAREKGILGDNIFGSSFRFDIFIKEGGGAYVCGEESSLM 384 Query: 188 NSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGT 247 NS+EG+R PR +PPFPA +G KP+ VNNVET +VP I+ G WY+++ GT Sbjct: 385 NSMEGKRGYPRFRPPFPAGAGFLAKPSNVNNVETYASVPMIIEKGAAWYKSVGLETCTGT 444 Query: 248 KLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDL 307 KL SG++ GL E+P GTT REI+E + G+++G FK Q GG+ L +DL Sbjct: 445 KLYCLSGKLNRTGLVEMPMGTTLREIIETFGKGIKNGKTFKFAQVGGSAGGILGPELMDL 504 Query: 308 PMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKI 367 P++ +S KAG LG+ + + D + V + ++ FF ESCG C PCR G + Sbjct: 505 PLDIDSTIKAGVTLGSGVVLVCDEDTCPVDFLLDVLNFFEHESCGQCVPCRVGTRQLHHL 564 Query: 368 LRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPF 427 R G PGD++ + + + + + CA + P+ + +KYFRE+F Sbjct: 565 ARKFATGTAVPGDLDLMVEKAKLMK--NSLCALGQSPILPITTMLKYFREDFLRHCDPSL 622 Query: 428 SNTHLINGI 436 N + Sbjct: 623 CCPECANSL 631 >UniRef50_A5FXJ6 NADH dehydrogenase (Quinone) n=11 Tax=Proteobacteria RepID=A5FXJ6_ACICJ Length = 434 Score = 501 bits (1290), Expect = e-140, Method: Composition-based stats. Identities = 227/425 (53%), Positives = 298/425 (70%), Gaps = 3/425 (0%) Query: 12 PLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGL 71 PLT ++ +QP+ + Y GY RKA G+SP+ +V +VK A ++GRGGAGF G Sbjct: 7 PLTSYIQPGRQPLDIAGYERAGGYAAMRKAF-GMSPESVVEEVKRAKVRGRGGAGFPAGR 65 Query: 72 KWSLMPK-DESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYI 130 KW P+ ++ RYL+ NADEMEPG++KDRLL+E PHL++EG++I AFA++A YI Sbjct: 66 KWEGAPRGADAPRHRYLVINADEMEPGSFKDRLLLEAAPHLMIEGIIIGAFAVQAETAYI 125 Query: 131 FLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSL 190 F+RGEY+ A L RA+AEA G LG +I+G+GF + VH GRYICGE +AL ++L Sbjct: 126 FVRGEYVLAMERLSRAVAEAEARGYLGADILGSGFSLTIHVHGSGGRYICGEASALFSAL 185 Query: 191 EGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSK-DAGTKL 249 EG+RA PR++PP TSG WGKPT VNNVETLC VP+I+ G +W+ +S+S + GTKL Sbjct: 186 EGKRAVPRTRPPRSTTSGLWGKPTVVNNVETLCCVPSIIERGADWFLGLSRSATEGGTKL 245 Query: 250 MGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPM 309 G SGRV PGLWELP GT EI+E++AGGMR+G + +A PGGA T F+ + D+PM Sbjct: 246 YGVSGRVNRPGLWELPVGTPLNEIIEEHAGGMREGYEARAVLPGGASTAFIMRENFDVPM 305 Query: 310 EFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILR 369 +F+S+GK GS LGTA + +D + V L+RN+E FFA+ESCGWCTPCRDGLPW +IL Sbjct: 306 DFDSVGKIGSWLGTANILVLDQKRCPVGLLRNIEHFFAQESCGWCTPCRDGLPWVERILT 365 Query: 370 ALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSN 429 ALE GEG+P DIE L FLGPG+TFC APGA+ PL+S +K+FREEFE + + Sbjct: 366 ALEAGEGEPDDIELLAHHVDFLGPGRTFCDLAPGAMAPLRSGLKFFREEFERHVSERHCP 425 Query: 430 THLIN 434 H Sbjct: 426 WHDTA 430 >UniRef50_B6ALB9 NADH dehydrogenase (Quinone) n=3 Tax=Leptospirillum RepID=B6ALB9_9BACT Length = 634 Score = 500 bits (1288), Expect = e-140, Method: Composition-based stats. Identities = 173/431 (40%), Positives = 250/431 (58%), Gaps = 3/431 (0%) Query: 11 HPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTG 70 P+ + ++ +L+ YR +GY L + Q++ +G+ GRGG F Sbjct: 185 EPVVFTGLRAEKTRYLERYREDHGYRALESLLKTGDAEAAFEQIRLSGVAGRGGGAFPMY 244 Query: 71 LKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYI 130 K + K+ RYL+CNADE EPGT+KDR +ME+ PH L+EGM I+A + A G+I Sbjct: 245 RKLDAVRKN--PPPRYLVCNADEGEPGTFKDRYIMERDPHSLIEGMAIAARIIGAEEGFI 302 Query: 131 FLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSL 190 +LR EY + L +AIAEA AGLLG I+G+ F F L ++ GAG YICGEET+LINSL Sbjct: 303 YLRSEYPHSFHILEKAIAEARNAGLLGPRILGSDFSFRLRLYRGAGAYICGEETSLINSL 362 Query: 191 EGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLM 250 EG+RA PR+KPP + G WGKPT NVETL N+P+IL NG +WY + K GTKL Sbjct: 363 EGKRAYPRNKPPHLSEVGLWGKPTEEQNVETLANLPSILRNGGDWYARLGDVKSPGTKLF 422 Query: 251 GFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPME 310 SG + PGL+E+P G + R ++ED GG+ G K P G+ + L HLDL ++ Sbjct: 423 CLSGHIARPGLYEIPLGMSLRSLIEDLGGGIPGGRSLKGLLPAGSASKMLLPRHLDLSLD 482 Query: 311 FESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRA 370 + SI + G+ LG+A + +D + MV L + F ESCG CTPCRDG +IL Sbjct: 483 YPSIAEVGAFLGSASVIVMDDSVCMVDLAYWIAAFSHHESCGQCTPCRDGTEDVYEILLK 542 Query: 371 LERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNT 430 + +GEG+P ++ L+ + ++ + C A S+++YF +E++A I T Sbjct: 543 IIQGEGKPAYLDLLKSIGTYMREA-SICGLGQSAPNIPLSSMEYFEDEWKAHIVDHVCPT 601 Query: 431 HLINGIQPNLL 441 + + + +L Sbjct: 602 GVCSMRRNGIL 612 >UniRef50_C1A8Y9 NADH-quinone oxidoreductase chain F n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8Y9_GEMAT Length = 442 Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats. Identities = 185/435 (42%), Positives = 250/435 (57%), Gaps = 8/435 (1%) Query: 7 TPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAG 66 P P+ + D + L +R++ GYE KAL P EI N VK++GL+GRGGAG Sbjct: 8 HPRETPVLSKYFGDPEARTLAGWRARGGYEALEKALAT-DPVEIQNIVKESGLRGRGGAG 66 Query: 67 FSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAY 126 F TG+KWS M D YL CNADE EPGT+KDR +M PH LVEG+ + A A+ A Sbjct: 67 FPTGMKWSFMKPDG--KTHYLCCNADESEPGTFKDREIMRWTPHGLVEGVALGAHAIYAE 124 Query: 127 RGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETAL 186 YI++RGE+ E + A+ EA AG+LG N MG+G ++ VH GAG YICGEETAL Sbjct: 125 TAYIYIRGEFTEPYARVCAAVEEAYAAGILGANAMGSGKRVDVHVHRGAGAYICGEETAL 184 Query: 187 INSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISK---SK 243 +NSLEGRR NPR KPPFPA +G +GKPT +NNVETL VP I+ NG EWY+ + K Sbjct: 185 MNSLEGRRGNPRIKPPFPAVAGLFGKPTTINNVETLTAVPYIVKNGAEWYKQFGRADNPK 244 Query: 244 DAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEA 303 GTKL G + PG +E+ G +E L D GG G + KA PGG+ LT Sbjct: 245 SIGTKLFSVCGNISRPGNYEVALGFPFKEFLYDLCGGPLPGREIKAVIPGGSSVPILTRE 304 Query: 304 HLDLP-MEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLP 362 + M++E + G+ +G+ + D +MV + L F+A ESC C+ CR+G Sbjct: 305 EAESALMDYEGMVAVGTMMGSGGVIVFDDRQDMVRQIARLTRFYAHESCAQCSQCREGTA 364 Query: 363 WSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAG 422 W+ +I+ + G+G D++TL + + GKT C + P+ S +K FR EFEA Sbjct: 365 WTTRIMERIRDGQGTAEDLDTLLSIADNMS-GKTICVLSDSCATPVVSGLKKFRHEFEAK 423 Query: 423 IKQPFSNTHLINGIQ 437 I S + ++ Sbjct: 424 IAANRSQVTVPGALR 438 >UniRef50_C0GLX1 NADH dehydrogenase (Quinone) n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GLX1_9DELT Length = 593 Score = 497 bits (1279), Expect = e-139, Method: Composition-based stats. Identities = 155/424 (36%), Positives = 235/424 (55%), Gaps = 2/424 (0%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 + + P LD Y + GY+ AR A + P EI+ ++K + L+GRGGAGFSTG K Sbjct: 114 VVLAHCGEIDPEDLDAYLNVKGYQAARNAFNNMHPVEIIEKIKRSKLRGRGGAGFSTGHK 173 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 W K + +Y++CN +E +PG + DR +ME PH ++EGM+I A A+ A +GYI++ Sbjct: 174 WEFAYKVDDQ-EKYVVCNGNESDPGAFADRCIMEGDPHAVIEGMMICARAIGAGKGYIYI 232 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 R Y A LR A+ + E GLLGKNI +G D ++ ++ G +ICGE TAL+ S+EG Sbjct: 233 RDGYSLAVKRLRLALKQCYERGLLGKNIFESGHDLDIKLYPAPGAFICGEATALVQSIEG 292 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGF 252 +RA P + + +G GKPT +NN ETL NVP IL NG W+ + GTK+ Sbjct: 293 KRAMPTPRMTRTSENGIRGKPTVINNAETLANVPKILRNGASWFAGLGTDTSGGTKVFSL 352 Query: 253 SGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFE 312 +G+VK+ GL E+P G T R+++ GG+ FK Q GG + + LD +++E Sbjct: 353 TGKVKSNGLVEVPMGATLRDVVYKVGGGIDQDRAFKGIQLGGPTGGCVPGSCLDSRVDYE 412 Query: 313 SIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALE 372 S+ AG+ +G+ + +D +V + + ESCG CTPCR G+ +IL + Sbjct: 413 SLALAGTIMGSGGMVVLDETNCIVDTAKFFLDITQAESCGKCTPCRIGMRRMYEILERIT 472 Query: 373 RGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHL 432 G G+ GD+E LE L + + C A P+ S ++YFR+E+ I+ + Sbjct: 473 IGNGRDGDVELLEDLGSHI-RATSLCGFGMTAPNPVLSTVRYFRDEYNIHIRDRKCPALV 531 Query: 433 INGI 436 + Sbjct: 532 CKSL 535 >UniRef50_Q3A639 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A639_PELCD Length = 571 Score = 493 bits (1269), Expect = e-138, Method: Composition-based stats. Identities = 169/413 (40%), Positives = 256/413 (61%), Gaps = 3/413 (0%) Query: 14 TWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKW 73 R R P + +Y ++GY+GA KALT +S +E++N+ +GL+GRGGAGF GLKW Sbjct: 157 VMRNRGLIDPAKIKDYIGRDGYQGAIKALTEMSSEEVINEAIGSGLRGRGGAGFPIGLKW 216 Query: 74 SLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLR 133 E +I+Y+LCNADE +PG + DR +ME PH ++EG++I A A+ A++GYI+ R Sbjct: 217 KF-AAAEKNDIKYILCNADEGDPGAFMDRNVMESDPHSIIEGLIIGAKAIGAHQGYIYCR 275 Query: 134 GEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGR 193 EY A L +AI +A LLG+NI+GTGF F++ V+ GAG ++CGEETAL+ S+EG+ Sbjct: 276 AEYPLAIETLNKAINQARALDLLGENILGTGFSFDISVYEGAGAFVCGEETALMRSIEGK 335 Query: 194 RANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFS 253 R NPR KPPFPA +G + KPT +NNVETL N+P I+ G +WY+ I K GTK+ + Sbjct: 336 RGNPRPKPPFPAKAGLFEKPTVLNNVETLSNIPQIIVKGADWYKEIGTEKSPGTKIFSIT 395 Query: 254 GRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFES 313 G ++N G E+P GTT I+ G + KA Q GG + + ++ + +++E+ Sbjct: 396 GDIENVGCVEVPIGTTVDTIVNQI-GIVSPDKNLKAVQLGGPSGGCIPKDYMHVAVDYET 454 Query: 314 IGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALER 373 + + G+ +G+ +A+ + + V + + +F E+CG C P R+G ++IL ++ Sbjct: 455 LQEYGAIMGSGGLIAMSDDKSGVDIAKFFIDFCQDEACGKCLPGREGTKQMLQILEKIDS 514 Query: 374 GEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQP 426 GEG P DIETL+ LC + CA AV P+ S ++YF EE++ +K Sbjct: 515 GEGSPDDIETLKVLCGVIRK-TALCALCKTAVNPVLSTLRYFPEEYQEAVKTK 566 >UniRef50_A7HJL0 NADH dehydrogenase (Quinone) n=5 Tax=Bacteria RepID=A7HJL0_FERNB Length = 632 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 172/420 (40%), Positives = 257/420 (61%), Gaps = 3/420 (0%) Query: 22 QPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDES 81 + +++Y ++ GY K L+G+ EI+ Q+K AGL+GRGG GF TGLKW + Sbjct: 162 ECESIEDYMARGGYTSLAKVLSGMDRKEIIEQIKAAGLRGRGGGGFPTGLKWEAAYNSKG 221 Query: 82 MNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAV 141 +I+Y++CNADE +PG + +R L+E+ PH ++EGM+I+A+ + A +GY ++R EY A Sbjct: 222 -DIKYVVCNADEGDPGAFMNRTLLERDPHSVLEGMIIAAYTIGAQKGYAYIRAEYPIAVE 280 Query: 142 NLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKP 201 +AI +A E GLLG+NI+GT F FEL+V GAG ++CGEETAL+ S+EG+R PR +P Sbjct: 281 MFNKAIEDAKEYGLLGENILGTDFSFELYVKEGAGAFVCGEETALLASIEGKRGVPRPRP 340 Query: 202 PFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGL 261 PFPA SG WGKPT +NNVE+ NVP I+ +GVE Y+ K GTK+ +G +K G+ Sbjct: 341 PFPAQSGLWGKPTLINNVESYANVPKIIRDGVENYRKRGVEKSPGTKMFSVTGPLKLTGI 400 Query: 262 WELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRL 321 E+ FGTT R IL++ GG +G K KA Q GG L E DLP++++++ G+ + Sbjct: 401 IEIQFGTTLRYILDNICGGTSNGQKIKAIQIGGPSGACLPEELFDLPLDYDTLKSVGAMV 460 Query: 322 GTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDI 381 G+ +A+ + MV + R +F RESCG C PCR+G + IL +G+ D+ Sbjct: 461 GSGGIVAITEDRCMVEVARFFLDFTKRESCGKCVPCREGTTQAYNILEKFTQGKATYEDL 520 Query: 382 ETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLINGIQPNLL 441 ETLEQL + + C A P+ S +KYF+ E+ I+ + + + ++ Sbjct: 521 ETLEQLSEIIKTA-SLCGLGKTAPNPIISTLKYFKNEYIEHIEGK-CPSGMCTAFKKYII 578 >UniRef50_C7NU21 NADH dehydrogenase (Quinone) n=5 Tax=cellular organisms RepID=C7NU21_HALUD Length = 634 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 166/424 (39%), Positives = 248/424 (58%), Gaps = 3/424 (0%) Query: 11 HPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTG 70 + P L+EY +++GY ++L+ SP+E++ +VK++ L+GRGG GF TG Sbjct: 148 QRVVLGNSGLVDPESLEEYVARDGYFALWESLSAGSPEEVIEEVKESNLRGRGGGGFPTG 207 Query: 71 LKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYI 130 +KW + +++ +++YL+CNADE +PG Y DR L+E P+ ++EGM I+ +AL A +GYI Sbjct: 208 MKWEFLAGNDA-DLKYLICNADEGDPGAYMDRTLLESDPYAVLEGMTIAGYALGAEKGYI 266 Query: 131 FLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSL 190 ++R EY A L+ AI +A EAGLLG++I G GFDF+L + GAG ++CGEETA+INSL Sbjct: 267 YVRAEYPLAIERLQHAIEQAREAGLLGQDIFGEGFDFDLEIKKGAGAFVCGEETAMINSL 326 Query: 191 EGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLM 250 EG R P+ +PP+PA G W +PT VNNVET NVPAIL NG EW+ +I + GTK+ Sbjct: 327 EGGRGMPKPRPPYPADEGLWAEPTNVNNVETWANVPAILRNGAEWFADIGTEESGGTKVF 386 Query: 251 GFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPME 310 +G V+N GL E+P GT E++ + G G +FKA Q GG + H + P++ Sbjct: 387 SVTGDVENTGLVEVPLGTRLEEVVFEIG-GGTTGGEFKAVQTGGPSGGVIPREHAETPID 445 Query: 311 FESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRA 370 +E++ + GS +G+ + +D MV R EF ESCG C PCR G +++L Sbjct: 446 YETLMELGSMMGSGGMIVMDESTCMVDQSRFFLEFSVDESCGKCPPCRYGTKQMLEMLEG 505 Query: 371 LERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNT 430 + G P I L L + + C A P+ S + YF +E+ ++ Sbjct: 506 ITNGAADPDVISELRSLGDSMEE-MSLCGLGQTAANPVMSTLDYFEDEYRNHVEDEECPA 564 Query: 431 HLIN 434 Sbjct: 565 GDCE 568 >UniRef50_B2KCG6 NADH dehydrogenase (Quinone) n=3 Tax=Bacteria RepID=B2KCG6_ELUMP Length = 620 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 166/437 (37%), Positives = 248/437 (56%), Gaps = 3/437 (0%) Query: 9 ETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFS 68 + H + + P ++EY S GY K L L + + ++K +GL+GRGG GF Sbjct: 137 KQHRILLKDCGKINPEDINEYISHGGYSALAKCLNELKEEGTIEEIKKSGLRGRGGGGFP 196 Query: 69 TGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRG 128 TGLKW + +Y++CN DE +PG Y DR L+E PH ++EGM+I FA A +G Sbjct: 197 TGLKWQFTRASKG-KQKYMICNGDEGDPGAYMDRSLLEGNPHAVIEGMIIGGFATGASKG 255 Query: 129 YIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALIN 188 ++R EY A ++ AI A +AGLLGKNI+G+ F ++L + GAG ++CGEETAL+ Sbjct: 256 LFYIRAEYPLAISRVQAAIDAAYKAGLLGKNILGSKFSYDLEIRYGAGAFVCGEETALMR 315 Query: 189 SLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTK 248 S+EG+R P KPPFP+ G WG PT +NNVETL N+P I+ NG EW+ I K GTK Sbjct: 316 SIEGQRGTPTPKPPFPSVKGLWGCPTSINNVETLANIPLIIYNGSEWFSKIGSGKSTGTK 375 Query: 249 LMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLP 308 + +G+VK+ GL E+P G T +E++ D G DG KA Q GG + D+P Sbjct: 376 VFAMTGKVKSSGLIEVPMGITIKEVVFDIGEGAYDGRVIKAVQTGGPSGGVIPAEKFDMP 435 Query: 309 MEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKIL 368 + +ES+ +AGS +G+ + +D+ MV + + EF ESCG C PCR G +KIL Sbjct: 436 ITYESLIEAGSMMGSGGLIVMDNSDCMVDIAKFYLEFCVEESCGKCVPCRIGGYQLLKIL 495 Query: 369 RALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFS 428 + + G+ E + L + + CA A P+ S +K F EF+ +K+ Sbjct: 496 KDISEGKEVGDYKEKIGNLALTMQKA-SLCALGQTAPNPVLSCLKSFGHEFDEHVKEKHC 554 Query: 429 NTHLING-IQPNLLKER 444 T + ++ ++++E+ Sbjct: 555 PTGKCSSLVRYSVIEEK 571 >UniRef50_C6X0Z6 NADH-ubiquinone oxidoreductase chain F n=2 Tax=Bacteria RepID=C6X0Z6_FLAB3 Length = 467 Score = 491 bits (1264), Expect = e-137, Method: Composition-based stats. Identities = 192/415 (46%), Positives = 256/415 (61%), Gaps = 16/415 (3%) Query: 25 WLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNI 84 + D YR + GY+ KAL ++PD IV +VK +GL+GRGGAGF TG+KWS + K E + Sbjct: 33 FYDVYRRQGGYDAVDKALK-MTPDVIVEEVKTSGLRGRGGAGFPTGMKWSFLAKPEGVP- 90 Query: 85 RYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLR 144 RYL+ NADE EPGT+KDR LME LPHLL+EGM+IS++AL A YI++RGEY L Sbjct: 91 RYLVVNADESEPGTFKDRYLMEFLPHLLIEGMIISSYALGANTAYIYIRGEYSWIPDILE 150 Query: 145 RAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFP 204 +AI EA AG LGKNI+GTG+D E++VH GAG YICGEETAL+ SLEG+R NPR KPPFP Sbjct: 151 QAINEAKAAGFLGKNILGTGYDLEIYVHRGAGAYICGEETALLESLEGKRGNPRLKPPFP 210 Query: 205 ATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWEL 264 A G W PT VNNVET+ V I+ G Y I + GTKL+ G + PG++E+ Sbjct: 211 AVKGLWESPTVVNNVETIAAVVPIMNIGGAEYAKIGVGRSTGTKLISACGNINKPGVYEI 270 Query: 265 PFGTTAREILE--DYAGGMRDGLKFKAWQPGGAGTDFLTEAHL-------DLPMEFESIG 315 T E + +Y GG+ +G K KA PGG+ + L M +ES+ Sbjct: 271 DMTITVEEFIYSDEYCGGIPNGKKLKACIPGGSSVPIVPANLLLKTINGEPRYMNYESLA 330 Query: 316 ----KAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRAL 371 G+ +G+ + +D + +V +L F+A ESCG CTPCR+G PW +IL+ + Sbjct: 331 DGGFATGTMMGSGGFIVLDEDQCVVKHTMSLAHFYAHESCGQCTPCREGTPWMYRILKNI 390 Query: 372 ERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQP 426 E G+G DI+ L + R + G T C A P+ +AI++FR+EFE I P Sbjct: 391 ETGKGTMADIDLLWDIQRKI-EGNTICPLGDAAAWPVAAAIRHFRDEFEWHIDNP 444 >UniRef50_B8HVQ4 NADH dehydrogenase (Quinone) n=11 Tax=Bacteria RepID=B8HVQ4_CYAP4 Length = 543 Score = 491 bits (1263), Expect = e-137, Method: Composition-based stats. Identities = 158/411 (38%), Positives = 244/411 (59%), Gaps = 3/411 (0%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 + P ++EY + GY+ K L ++P E+V ++ +GL+GRGG G+ TGLK Sbjct: 119 IVREYSGKIDPERIEEYIAVGGYQSLHKVLYEMTPAEVVTEITRSGLRGRGGGGYPTGLK 178 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 W+ + K + +Y++CN DE +PG + DR ++E PHL++EGM I+ +A+ A G+I++ Sbjct: 179 WATVAK-MPGDQKYVICNGDEGDPGAFMDRSVLESDPHLVLEGMAIAGYAMGANHGFIYV 237 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 R EY A L++AI +A + GLLG I + FDF++ + GAG ++CGEETALI S+EG Sbjct: 238 RAEYPLAIQRLQKAIQQAKKYGLLGSQIFDSHFDFKIEIRIGAGAFVCGEETALIASIEG 297 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGF 252 R NPR +PP+PA G W PT +NNVET N+ I+ G +WY +I K GTK+ Sbjct: 298 GRGNPRPRPPYPAQFGLWHCPTLINNVETFANIAPIVREGADWYASIGTEKSKGTKIFAL 357 Query: 253 SGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFE 312 +G+++N GL E+P G + R+I+E+ GG+ +G + KA Q GG + LD P++++ Sbjct: 358 TGKIRNNGLIEVPMGISLRQIVEEMGGGVPEG-QVKAVQTGGPSGGCIPADLLDTPVDYD 416 Query: 313 SIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALE 372 S+ GS +G+ + +D NMV + EF ESCG C PCR G +L L Sbjct: 417 SLTALGSMMGSGGMVVMDESTNMVEVAHFYMEFCRGESCGKCIPCRAGTVQLYGLLTKLL 476 Query: 373 RGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGI 423 + P D++ L++LC + + C A P+ S ++YF EE+EA + Sbjct: 477 HKQATPADLDKLKELCAMVKE-TSLCGLGMSAPNPVLSTLRYFGEEYEALL 526 >UniRef50_B4SQT1 NADH-quinone oxidoreductase, F subunit n=16 Tax=cellular organisms RepID=B4SQT1_STRM5 Length = 446 Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats. Identities = 178/429 (41%), Positives = 253/429 (58%), Gaps = 7/429 (1%) Query: 3 NIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTG-LSPDEIVNQVKDAGLKG 61 + P H + + P + Y GY RK L + P++++ VK +GL+G Sbjct: 10 PVGPAPLPHQVVYTTLHYDTPWSYESYLKTGGYAALRKILEEKIPPEQVIEMVKASGLRG 69 Query: 62 RGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAF 121 RGGAGF TGLKWS MPK +Y+LCN+DE EPGT KDR ++ PH +VEGM I+ + Sbjct: 70 RGGAGFPTGLKWSFMPKGNMQ--KYILCNSDESEPGTCKDRDILRYNPHSVVEGMAIACY 127 Query: 122 ALKAYRGYIFLRGEYI-EAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYIC 180 A + GY +LRGE+ E + +A+A+A G LGKN+MG+G D +++ GAG YIC Sbjct: 128 ATGSTVGYNYLRGEFHHEPFEHFEQALADAYANGWLGKNVMGSGVDIDIYGALGAGAYIC 187 Query: 181 GEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNIS 240 GEETAL+ SLEG++ PR KPPFPA G +GKP+ +NN ET +VPAI+ NG EW++ +S Sbjct: 188 GEETALMESLEGKKGQPRYKPPFPANFGLYGKPSTINNTETYGSVPAIIRNGPEWFKGLS 247 Query: 241 KSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFL 300 + + G K SG V+N G +E+P GTT ++L+ AGG+R G K PGG L Sbjct: 248 LTANGGPKCFSVSGCVQNGGNFEVPLGTTFHDLLQ-MAGGLRPGRTLKGAIPGGVSMPVL 306 Query: 301 TEAHL-DLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRD 359 T A L DLPM++++I GS LG+ + +D + V + +FF +ESCG CTPCR+ Sbjct: 307 TAAELKDLPMDYDTIRALGSGLGSGAIVVLDDSVCCVKFACRISQFFHKESCGQCTPCRE 366 Query: 360 GLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEF 419 G W ++L + G+ D+ L+ + + G T CA A P+Q ++ F +EF Sbjct: 367 GTGWMHRVLERIVAGKATMEDLHQLKAVAGQI-EGHTICAFGEAAAWPIQGFLRQFWDEF 425 Query: 420 EAGIKQPFS 428 E I S Sbjct: 426 EYYIVNGHS 434 >UniRef50_Q9RU92 NADH dehydrogenase I, F subunit n=1 Tax=Deinococcus radiodurans RepID=Q9RU92_DEIRA Length = 444 Score = 486 bits (1252), Expect = e-136, Method: Composition-based stats. Identities = 205/423 (48%), Positives = 270/423 (63%), Gaps = 11/423 (2%) Query: 5 IRTPETH---PLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKG 61 I + H P + + LD Y+ GY+G R+A L PD ++ +VK +GL+G Sbjct: 10 ITSALDHRFAPTLYAQVGQPRSWTLDTYQRGGGYQGVRRAFA-LGPDAVIEEVKKSGLRG 68 Query: 62 RGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAF 121 RGGAGF+TGLKWS MP ++ ++CNADE EPGT+KDR LM + PH L+EGMLI + Sbjct: 69 RGGAGFATGLKWSFMPLNDG-KPHLIICNADESEPGTFKDRYLMSEDPHQLIEGMLIGGY 127 Query: 122 ALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICG 181 A++A RGYI++RGEY+ AA L AI EA AGLLGK+I+G+GFDF+L VH GAG YICG Sbjct: 128 AMRASRGYIYIRGEYVLAAERLWAAIHEARAAGLLGKDILGSGFDFDLQVHRGAGAYICG 187 Query: 182 EETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISK 241 EETAL+NSLEG RANPR KPPFPA +G +G PT +NNVET C IL G +W+ + Sbjct: 188 EETALMNSLEGLRANPRLKPPFPAAAGLYGLPTTINNVETFCAATHILKYGADWHAGMGT 247 Query: 242 SKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFL- 300 K G KL SG V PG++ELP GT RE++ D+AGG + KA PGG L Sbjct: 248 EKSKGMKLFQISGPVARPGVYELPLGTPFRELIYDWAGGPTED--IKAIIPGGISCQLLK 305 Query: 301 -TEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRD 359 +E LD PM++ES+ AGS LGT + ++V N F+ ESCG CTPCR+ Sbjct: 306 WSEDILDTPMDYESLAAAGSSLGTGGVTLIPAAASIVDTTWNAVRFYGHESCGKCTPCRE 365 Query: 360 GLP-WSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREE 418 G+ W V++ L RG GQPGD + + +G G++FCA A + P+ S+I+ FREE Sbjct: 366 GISGWMVRMYEKLARGHGQPGDTNLILDMADNIG-GRSFCALADACLGPVLSSIRLFREE 424 Query: 419 FEA 421 ++A Sbjct: 425 YDA 427 >UniRef50_Q6MDR1 Probable NADH-ubiquinone oxidoreductase chain F n=2 Tax=Parachlamydiaceae RepID=Q6MDR1_PARUW Length = 432 Score = 485 bits (1249), Expect = e-135, Method: Composition-based stats. Identities = 195/416 (46%), Positives = 264/416 (63%), Gaps = 3/416 (0%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 + DD ++ Y GY+ +KA++ +S D+++ VK + L+GRGG GF TGLK Sbjct: 6 ILTAYMDDPHQCKIETYERNGGYQALKKAISSISSDQLIEMVKQSWLRGRGGGGFQTGLK 65 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 WS +PKD +YL+CN DE EPGT+KDR ++E PH L+EG++++ +A+ A + +I+ Sbjct: 66 WSFVPKD-CQISKYLVCNCDESEPGTFKDRYIIENDPHQLIEGIILACYAIGAKQAFIYC 124 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 RGE+ E LR AI EA + G L + F + VH GAG YI GEETA +NSLEG Sbjct: 125 RGEFFEGNKKLRLAIQEAKKRGYLEAPLGEANFSVSIIVHPGAGAYIAGEETAQLNSLEG 184 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGF 252 RA PR KPPFPA SG + KPT VNNVETLCNV I+ GVEWYQ+I K K+ GTK+ Sbjct: 185 YRATPRLKPPFPAVSGLYEKPTVVNNVETLCNVVHIVNRGVEWYQSIGKPKNTGTKIFQV 244 Query: 253 SGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFE 312 SG V+NPG +E P G +E+LE AG M G +FKA PGG+ LTE LD PM+F+ Sbjct: 245 SGHVQNPGCFEFPLGIPLKEVLER-AGWMLPGHQFKACYPGGSSCSLLTERDLDTPMDFD 303 Query: 313 SIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALE 372 S+ S LGTA + +D +MV + L EF+ ESCG CTPCR+G W+ +IL + Sbjct: 304 SVAAKKSMLGTASIIVMDDSTDMVKVANRLMEFYQNESCGKCTPCREGTRWTKQILTRIL 363 Query: 373 RGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFS 428 G G GD++T+E++C+ + +FC APGA P+ SAI+ FR EFE+ I + Sbjct: 364 AGRGTVGDLKTIERICQQMEMD-SFCPLAPGAALPIVSAIREFRGEFESYIMRNIH 418 >UniRef50_A8GM77 NADH-quinone oxidoreductase subunit F n=17 Tax=Proteobacteria RepID=NUOF_RICAH Length = 423 Score = 484 bits (1247), Expect = e-135, Method: Composition-based stats. Identities = 172/410 (41%), Positives = 247/410 (60%), Gaps = 4/410 (0%) Query: 16 RLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSL 75 Q L + + G KAL D I+ ++K +GL+GRGGAGFSTG+KWS Sbjct: 10 TNLHGGQIHDLKSSKKR-GDWDNTKALLDKGRDFIIEEIKKSGLRGRGGAGFSTGMKWSF 68 Query: 76 MPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGE 135 MPK+ S YL+ NADE EPGT KDR ++ PH L+EG L+++FA+ A YI++RGE Sbjct: 69 MPKN-SEKPCYLVVNADESEPGTCKDRDILRFEPHKLIEGCLLASFAIGANNCYIYIRGE 127 Query: 136 YIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRA 195 + A N++RA+ EA + L+GKN G+GFD +++H GAG YICGEETAL+ SLEG++ Sbjct: 128 FYNEASNIQRALDEAYKDRLIGKNACGSGFDCNIYLHRGAGAYICGEETALLESLEGKKG 187 Query: 196 NPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR 255 PR KPPFPA G +G PT +NNVE++ VP IL W+ +I K + GTK+ SG Sbjct: 188 MPRLKPPFPAGFGLYGCPTTINNVESIAVVPTILRRRASWFASIGKPNNTGTKIFCISGH 247 Query: 256 VKNPGLWELPFGTTAREILEDYAGGMRDGL-KFKAWQPGGAGTDFLTEAHLDLPMEFESI 314 V P E G + +E++E YAGG+R G KA PGG+ L ++ ++ M+F+S+ Sbjct: 248 VNKPCNVEEAMGISLKELIEKYAGGVRGGWDNLKAIIPGGSSVPLLPKSLCEVDMDFDSL 307 Query: 315 GKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERG 374 GS LGT + +D +++ + L +F+ ESCG CTPCR+G W +++ L +G Sbjct: 308 RTVGSGLGTGGIIVMDKSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWRVMIRLVKG 367 Query: 375 EGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIK 424 + +I+ L + + + G T CA A P+Q I++FR E E IK Sbjct: 368 NAKKSEIDELLNVTKEI-EGHTICALGDAAAWPIQGLIRHFRSEIEDRIK 416 >UniRef50_D2R5G5 NADH dehydrogenase (Quinone) n=3 Tax=Planctomycetaceae RepID=D2R5G5_9PLAN Length = 450 Score = 484 bits (1245), Expect = e-135, Method: Composition-based stats. Identities = 182/426 (42%), Positives = 256/426 (60%), Gaps = 14/426 (3%) Query: 12 PLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGL 71 P+ + Y GY +K L ++P+++ VK +GL+GRGGAGF TGL Sbjct: 6 PVLLAQVGKPESYTRKVYERDGGYSALKKVLK-MTPNDVKETVKSSGLRGRGGAGFPTGL 64 Query: 72 KWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIF 131 KW+ +P++ I Y NADE EPGT+ +R+LME PH ++EG++I+ FA +A Y + Sbjct: 65 KWTFLPQNHPGPI-YFCLNADESEPGTFNNRILMEDDPHQVLEGIIIACFATQARAAYFY 123 Query: 132 LRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLE 191 +R EY A ++RAI E EAG LG+NI+G+G+ ++ +H GAG YICGEET LI SLE Sbjct: 124 MRCEYPTAYERVKRAIEECYEAGYLGENILGSGYTLDIHLHRGAGAYICGEETGLIESLE 183 Query: 192 GRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDA------ 245 G+RA PR KPPFPA GA+ KPT VNNVET V I NGV+W+++I + D Sbjct: 184 GKRAWPRIKPPFPAVEGAFRKPTVVNNVETCACVTQIFRNGVDWFKSIGIAPDPNNPRDA 243 Query: 246 ---GTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTE 302 G KL SG V PG +E P G T ++++ D+ GG+ G K KA PGG LT Sbjct: 244 GSYGPKLYCLSGHVNKPGCYEAPLGITVKDLINDFGGGVWKGRKAKAVIPGGISMGLLTG 303 Query: 303 AHLDLPMEFESIGKAGS-RLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGL 361 L P++F GK G LGTA + +D + +MV + N FF+ ESCG CTPCR+G Sbjct: 304 DELHCPLDFNGPGKFGCLGLGTAAVVVMDDQTSMVDFLLNSCRFFSHESCGQCTPCREGT 363 Query: 362 PWSVKILRALERGEGQPGDIETLEQLCRFLG--PGKTFCAHAPGAVEPLQSAIKYFREEF 419 W+ +++ ++ G+G+ D++ L ++ +G PG T C A GA P+++ IK FR E Sbjct: 364 SWATRMMTRIKHGQGRLKDLDLLAEIGETIGIMPGSTICGLADGAAWPIKNCIKKFRGEL 423 Query: 420 EAGIKQ 425 E IK+ Sbjct: 424 EEFIKR 429 >UniRef50_B5IPC7 Formate dehydrogenase, beta subunit n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IPC7_9CHRO Length = 606 Score = 483 bits (1244), Expect = e-135, Method: Composition-based stats. Identities = 159/419 (37%), Positives = 235/419 (56%), Gaps = 6/419 (1%) Query: 12 PLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGL 71 + P +D+ + Y ++ L +P+++ +QVK +GL+GRGGAG+ TGL Sbjct: 117 AVVLESCGVVNPESIDDALAHGSYAQLKRVLLECTPEQVRDQVKRSGLRGRGGAGYPTGL 176 Query: 72 KWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIF 131 KW + + R ++CNADE +PG + DR ++E PH L+EGM I+AFA+ A +GY++ Sbjct: 177 KWDTV-ALQPPGPRTVVCNADEGDPGAFMDRSVLESDPHRLIEGMAIAAFAVGADQGYVY 235 Query: 132 LRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLE 191 +R EY A LR A+ +A GLLG I G+ F+ L V GAG Y+CGEETAL+ S++ Sbjct: 236 VRAEYPLAIERLRLALRQARSKGLLGNGIAGSSFNLRLEVRVGAGAYVCGEETALLASIQ 295 Query: 192 GRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMG 251 G+R PR +PPFPA G WG PT +NNVETL ++P IL G +WY + GTK+ Sbjct: 296 GQRGTPRPRPPFPAQVGLWGAPTLINNVETLASIPVILREGGDWYAAMGTEGSKGTKVFA 355 Query: 252 FSGRVKNPGLWELPFGTTAREILEDY----AGGMRDGLKFKAWQPGGAGTDFLTEAHLDL 307 SG V+ GL E+P GT+ R +++ GG KA Q GG + LD Sbjct: 356 LSGAVERTGLVEVPMGTSLRTVVQTIGGGVPGGEGPDGGVKAVQTGGPSGGCIPAHLLDT 415 Query: 308 PMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKI 367 P+++ES+ GS +G+ + + M + R+ F ESCG C PCR G +++ Sbjct: 416 PVDYESLRALGSMMGSGGLVVMGERTAMPEVARHFMRFSVNESCGKCVPCRAGTVQLLQL 475 Query: 368 LRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQP 426 L GD+E LE LC +G + C A P+ S ++YFR+E++A ++P Sbjct: 476 LDRFVERRASLGDLERLEALCGMVG-ATSLCGLGQAAPNPVLSTLRYFRQEYQAACREP 533 >UniRef50_B2ULY8 NADH dehydrogenase (Quinone) n=58 Tax=Bacteria RepID=B2ULY8_AKKM8 Length = 466 Score = 482 bits (1242), Expect = e-135, Method: Composition-based stats. Identities = 188/443 (42%), Positives = 271/443 (61%), Gaps = 27/443 (6%) Query: 9 ETHPLTWR--LRDDKQPVW---LDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRG 63 E HP R L++ + W +D Y + GYE +KAL G+ P ++++VK +GL+GRG Sbjct: 10 EPHPRETRRILKNVNREGWNTSIDCYLADGGYEELKKAL-GMEPRAVIDEVKKSGLRGRG 68 Query: 64 GAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFAL 123 GAGF TG+KW+ +P + + + YL+CN DE EPGT+KDR ++ Q PH L+EGM+IS++A+ Sbjct: 69 GAGFPTGVKWTFIPPNNTKPV-YLVCNCDESEPGTFKDRYIVHQDPHQLIEGMVISSYAV 127 Query: 124 KAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEE 183 A++ YI++R E+ AA + +A+ EA E G LG NI G+G++ E+ +H GAG YICGEE Sbjct: 128 GAHQAYIYMREEFPIAAEIMLKALQEARERGFLGSNIQGSGYNLEIHLHRGAGAYICGEE 187 Query: 184 TALINSLEGRRANPRSKPP-FPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKS 242 TAL+NSLEG R PR KPP FPA G +G PT VNNVE+LC V I+A G E Y Sbjct: 188 TALLNSLEGDRPYPRIKPPYFPAAIGLYGCPTIVNNVESLCQVKHIMAMGGEAYSQEGAK 247 Query: 243 KDAGTKLMGFSGRVKNPGLWELPFG-TTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLT 301 + GT+++G SG VK PG +E+ G T E+L D GG RDG +FKA PGG+ + + Sbjct: 248 RSPGTRIIGVSGDVKRPGFYEIVSGSMTFGELLYDVCGGPRDGRQFKAVIPGGSSSKVMR 307 Query: 302 EAH----------------LDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEF 345 D+P++ +SI + GS G+ + +D +M + N+ F Sbjct: 308 TDAEYKVQNPDGTMGKITFFDIPLDLDSIARHGSMSGSGAVIVMDDSRSMPWAMNNINRF 367 Query: 346 FARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAV 405 +A ESCG CTPCR+G PW +K+ + G+ P D++ L ++ + GKT CA A Sbjct: 368 YAHESCGQCTPCREGCPWMMKLSTRILEGKAAPSDVDLLIEVANQI-EGKTVCAFGEAAS 426 Query: 406 EPLQSAIKYFREEFEAGIKQPFS 428 P Q+ + F+EEF A + PF+ Sbjct: 427 WPTQAMVSKFKEEFVA-LTDPFN 448 >UniRef50_A1ALP4 NADH dehydrogenase (Quinone) n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALP4_PELPD Length = 427 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 165/406 (40%), Positives = 243/406 (59%), Gaps = 4/406 (0%) Query: 21 KQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDE 80 L Y+ + GY+ AL L P ++ +V +GL+GRGGAGF TG KWS + K Sbjct: 14 ADSHTLKAYQGRGGYQALENALKTLQPIDVEKEVMASGLRGRGGAGFPTGSKWSFVNK-- 71 Query: 81 SMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAA 140 + YL CNADE EPGT+KDR + E H L+EGM+++A+AL +I++RGE+ + Sbjct: 72 KAPVVYLCCNADEGEPGTFKDRWIFEHNSHQLIEGMILAAYALNVRNAFIYIRGEFDLSF 131 Query: 141 VNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSK 200 L A++EA +AG LG+NI+G+ F ++ V G G Y+CGEE++L S+EG + PR+K Sbjct: 132 RRLMDAMSEAYKAGYLGENILGSSFSCDIRVMQGGGAYVCGEESSLYTSIEGFKGYPRNK 191 Query: 201 PPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPG 260 PPFPA G + PT VNNVETL NVP I+ NG + + + K GTK+ G SG VK PG Sbjct: 192 PPFPAVQGLYKAPTVVNNVETLANVPWIMTNGAKAFSAMGTEKHPGTKIFGVSGHVKKPG 251 Query: 261 LWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLP-MEFESIGKAGS 319 L+ELP G ++++ + GG+ +G + KA PGG+ T L ++ ++ E + + Sbjct: 252 LYELPLGYPLKKLIFEECGGILNGKELKAVIPGGSSTPILLPQDVETANLDAECLSTYRT 311 Query: 320 RLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPG 379 LG+ + + + MV L+ L F+A ESCG CTPCR+G W I+ + G+G G Sbjct: 312 MLGSGGVIVIAEGVCMVRLLHTLSRFYAHESCGQCTPCREGSAWMNDIISRIVAGKGVKG 371 Query: 380 DIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 D+E+LE++ + + G T CA A P+ + I FR EF+ I+ Sbjct: 372 DLESLERITKGIM-GNTVCALGDAASMPVINFITKFRAEFDYYIEH 416 >UniRef50_B9KZ80 NAD-dependent formate dehydrogenase beta subunit n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KZ80_THERP Length = 574 Score = 481 bits (1238), Expect = e-134, Method: Composition-based stats. Identities = 154/415 (37%), Positives = 240/415 (57%), Gaps = 2/415 (0%) Query: 19 DDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPK 78 P ++++ + GY KAL ++P+E++ +VK + L+GRGGAGF TG+KW + Sbjct: 150 GIIDPESIEDFIAIGGYRAFLKALFEMTPEEVIAEVKASNLRGRGGAGFPTGIKWESGRR 209 Query: 79 DESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIE 138 + +Y++ N+ E EP +KDR L+E PHL++EG+LI +AL+ GY ++ GE+ Sbjct: 210 TPA-RPKYVVVNSHEGEPNVFKDRRLLESNPHLVLEGLLIGCYALETPCGYNYIGGEHAL 268 Query: 139 AAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPR 198 A +RA+ +A E GLLG +I+G+GF + + TG G YICGE +AL+ ++ G+R PR Sbjct: 269 ALQRFQRAVEQAYELGLLGDDILGSGFSCHVRIRTGGGAYICGEGSALMYAIMGQRGQPR 328 Query: 199 SKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKN 258 +KPP G W +PT +NN ET ++PAI+ NG WY ++ + GTKL+ G VK Sbjct: 329 TKPPRSVEEGLWRRPTVLNNTETFASIPAIIQNGGSWYASLGTKESTGTKLVTMQGPVKY 388 Query: 259 PGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAG 318 G+ E+ FG + RE++ D GG+R+G + K Q GG L E LD+P++FE++ G Sbjct: 389 LGVAEIEFGLSMRELIFDVFGGLREGYRLKGIQTGGVSAGPLREDELDVPIDFEALTPLG 448 Query: 319 SRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQP 378 + +G+ +A D + V R L F ESCG CTPCR G P V+IL + G G+P Sbjct: 449 AMVGSGGFVAFDESVCAVDFARYLVAFSRYESCGKCTPCRLGTPALVEILDRIRHGFGRP 508 Query: 379 GDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLI 433 D++ ++ + + + C A PL ++ FR+EF I + + Sbjct: 509 EDLDIIQYASKHIIE-LSLCGLGQVAPMPLLGMLERFRDEFIEHITERRCRAGVC 562 >UniRef50_D1C356 NADH dehydrogenase (Quinone) n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C356_SPHTD Length = 575 Score = 481 bits (1237), Expect = e-134, Method: Composition-based stats. Identities = 153/421 (36%), Positives = 236/421 (56%), Gaps = 2/421 (0%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 + P +++Y ++ GY+ KA+ ++P+E+VN+VK + ++GRGGAGF G+K Sbjct: 143 VLMADWGIIDPESIEDYIARGGYQAWIKAIFDMTPEEVVNEVKISNVRGRGGAGFPAGIK 202 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 W + ++ +Y++ N+ E EP +KDR L+E PHL++EG++I +AL+ GY ++ Sbjct: 203 WESGRRTQAWP-KYVIANSHEGEPNVFKDRRLIESNPHLVLEGIMIGCYALETPHGYNYV 261 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 GE+ A R+A+ +A E GLLG N++G+G + V TG G YICGE +AL+ S+ G Sbjct: 262 GGEHKLAIERFRKAVDQAYELGLLGDNVLGSGVSCHIRVRTGGGAYICGEGSALMYSVMG 321 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGF 252 +R PR+KPP G W +PT +NN ET N+P I+ NG WY + K GTKL+ Sbjct: 322 QRGQPRTKPPRSVEEGVWKRPTVLNNTETFANIPGIIRNGGAWYAAMGTEKSTGTKLITM 381 Query: 253 SGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFE 312 G V+ G+ E+ G RE++ GGMR+G FK Q GG L E LD+P++F+ Sbjct: 382 QGPVQRIGVVEIEMGMPMREVIFGLFGGMREGYVFKGVQTGGVSAGPLREDQLDVPVDFD 441 Query: 313 SIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALE 372 S+ G LG+ + D + V R L+EF ESC C PCR G P V+I+ + Sbjct: 442 SLTPLGGMLGSGGFVVFDQSVCAVDFARYLQEFNRYESCAKCVPCRLGNPALVEIIERIR 501 Query: 373 RGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHL 432 G+ + GD+ +E+ R + + C A P I+ F E+F A I++ + Sbjct: 502 LGQARQGDLALIEETSRPI-IDLSLCGLGQVAPMPTLGMIRAFPEDFAAHIEEHRCPAGV 560 Query: 433 I 433 Sbjct: 561 C 561 >UniRef50_A5GD11 NADH dehydrogenase (Quinone) n=6 Tax=Deltaproteobacteria RepID=A5GD11_GEOUR Length = 433 Score = 479 bits (1234), Expect = e-134, Method: Composition-based stats. Identities = 207/420 (49%), Positives = 279/420 (66%), Gaps = 4/420 (0%) Query: 11 HPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTG 70 + ++ + V EY + G++ +KAL LSP+++ V DA L+GRGGAGF TG Sbjct: 11 EQVLFQHNRPGRAVTFTEYCGEGGFDALKKALKELSPNDVQQLVIDANLRGRGGAGFPTG 70 Query: 71 LKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYI 130 KWS +P+D R+L+CN DEMEPGTYKDR+L+E P LVEG++++ +A+ +I Sbjct: 71 KKWSFVPRDL-PGPRWLICNCDEMEPGTYKDRVLLEANPWSLVEGIILACYAIGVSHAFI 129 Query: 131 FLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSL 190 F+R Y AA N+RRAIAEA AGL+G NI+G+GF ++ +H AGRYICGEETAL+N+L Sbjct: 130 FIRRGYETAAGNVRRAIAEAKGAGLIGDNILGSGFSCDIDLHVSAGRYICGEETALMNAL 189 Query: 191 EGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISK-SKDAGTKL 249 EG+RANPRSKPPFPA G WG PT VNNVETL N+P I+ANG W++ ++K + AGTKL Sbjct: 190 EGKRANPRSKPPFPAVKGLWGGPTVVNNVETLANIPYIIANGPAWFKGLAKIPEAAGTKL 249 Query: 250 MGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPM 309 SG V+N ELP G +I++ GGM G +FKA PGGA T F TE H +PM Sbjct: 250 FCISGHVQNTVCMELPLGMPLGDIIDGPCGGMLPGKRFKACIPGGASTPFFTEEHRGVPM 309 Query: 310 EFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILR 369 +F+++ KAGSRLGT + D E +V NL +F+ARESCGWCTPCR+GLP+ V +L Sbjct: 310 DFDTVAKAGSRLGTGGIIVFDEETCLVGATLNLVKFYARESCGWCTPCREGLPFVVDVLA 369 Query: 370 ALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSN 429 LE G+G+ DI+ L + ++L FCA APGA+ P++ ++ F EE I + Sbjct: 370 RLEAGKGETEDIDILREHVKYLNLA--FCALAPGAMGPVEGLLRLFEEEIREHIIKRRCP 427 >UniRef50_P49821 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=426 Tax=cellular organisms RepID=NDUV1_HUMAN Length = 464 Score = 479 bits (1234), Expect = e-134, Method: Composition-based stats. Identities = 168/394 (42%), Positives = 243/394 (61%), Gaps = 3/394 (0%) Query: 34 GYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADE 93 G K + PD I+ ++K +GL+GRGGAGF TGLKWS M K +YL+ NADE Sbjct: 60 GDWYKTKEILLKGPDWILGEIKTSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADE 119 Query: 94 MEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEA 153 EPGT KDR ++ PH L+EG L+ A+ A YI++RGE+ A NL+ AI EA EA Sbjct: 120 GEPGTCKDREILRHDPHKLLEGCLVGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYEA 179 Query: 154 GLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKP 213 GL+GKN G+G+DF++FV GAG YICGEETALI S+EG++ PR KPPFPA G +G P Sbjct: 180 GLIGKNACGSGYDFDVFVVRGAGAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCP 239 Query: 214 TCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREI 273 T V NVET+ P I G W+ + +++GTKL SG V +P E +E+ Sbjct: 240 TTVANVETVAVSPTICRRGGTWFAGFGRERNSGTKLFNISGHVNHPCTVEEEMSVPLKEL 299 Query: 274 LEDYAGGMRDGL-KFKAWQPGGAGTDFLTEAHLD-LPMEFESIGKAGSRLGTALAMAVDH 331 +E +AGG+ G A PGG+ T + ++ + + M+F+++ +A + LGTA + +D Sbjct: 300 IEKHAGGVTGGWDNLLAVIPGGSSTPLIPKSVCETVLMDFDALVQAQTGLGTAAVIVMDR 359 Query: 332 EINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFL 391 ++V + L EF+ ESCG CTPCR+G+ W K++ RG+ +P +I++L ++ + + Sbjct: 360 STDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMARFVRGDARPAEIDSLWEISKQI 419 Query: 392 GPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 G T CA GA P+Q I++FR E E +++ Sbjct: 420 -EGHTICALGDGAAWPVQGLIRHFRPELEERMQR 452 >UniRef50_Q0AYU9 NADH dehydrogenase (Quinone) n=4 Tax=Bacteria RepID=Q0AYU9_SYNWW Length = 408 Score = 477 bits (1228), Expect = e-133, Method: Composition-based stats. Identities = 162/418 (38%), Positives = 239/418 (57%), Gaps = 13/418 (3%) Query: 8 PETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGF 67 E + D P ++Y G++G KA G++ +++ +VK +GL+GRGGAGF Sbjct: 2 AEEIRILLAHADQIDPAQAEDYIKVGGFKGLEKA-RGMTSKDLIEEVKKSGLRGRGGAGF 60 Query: 68 STGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYR 127 + G+KWS +P E ++Y++CN DE EPGTYKDR++ E+ L+EGM I A+ A + Sbjct: 61 NAGMKWSFVPPAE---VKYVVCNLDEGEPGTYKDRIICEKNAQALIEGMAICGVAINAKQ 117 Query: 128 GYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALI 187 GYI+ RGEY LR+AI A + G LG+ F++ V GAG Y+CGEETALI Sbjct: 118 GYIYCRGEYPFVVDLLRKAIQSAKDVGALGE--------FDIEVRMGAGAYVCGEETALI 169 Query: 188 NSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGT 247 S+EG R PR KPPFP +G WG PT VNNVET +P IL NG +W+ +I K GT Sbjct: 170 ESIEGHRGEPRFKPPFPGVAGLWGVPTVVNNVETFACLPYILTNGADWFASIGAPKYPGT 229 Query: 248 KLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDL 307 K++ +G V NP +E+P +++ GG+++G KFKA Q GG F+ E +L+ Sbjct: 230 KVLTLTGDVNNPTYFEVPTNYILSDVIYKLGGGIKNGRKFKAVQVGGTSGAFIPEQNLNT 289 Query: 308 PMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKI 367 ++F+S+ G+ LG+ + +D ++V +V + +FF ESCG C PCR+G +I Sbjct: 290 SIDFDSMSAIGAALGSGAVLVMDETRDIVDIVTRISKFFEHESCGKCNPCREGTFRCREI 349 Query: 368 LRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 + + G DI+ L L R + C A P+ S I++F E+ + Q Sbjct: 350 MEKINSGRATEADIDNLLLLARVMKRAA-LCGLGQAAPVPITSTIEHFGHEYRRKLLQ 406 >UniRef50_O66841 NADH-quinone oxidoreductase subunit F n=6 Tax=Aquificales RepID=NUOF_AQUAE Length = 426 Score = 476 bits (1225), Expect = e-133, Method: Composition-based stats. Identities = 179/413 (43%), Positives = 248/413 (60%), Gaps = 10/413 (2%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 + + + +DEY GY+ KAL +SP+EI++ V + L+GRGGAGF TG K Sbjct: 18 MLLKRAKKPRVHSIDEYLKDGGYQALEKALN-MSPEEIIDWVDKSTLRGRGGAGFPTGKK 76 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 W ++ RY +CNADE EPGT+KDR+++E+ PHLL+EG++IS++A+ A YI++ Sbjct: 77 WKFAVQN--PGPRYFICNADESEPGTFKDRIIIERDPHLLIEGIIISSYAIGANEAYIYI 134 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 RGEY LR AI EA + G LGKNI+G+GFD E++V GAG YICGEETALI SLEG Sbjct: 135 RGEYPAGYYILRDAIEEAKKKGFLGKNILGSGFDLEIYVARGAGAYICGEETALIESLEG 194 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGF 252 +R +PR KPP+P G WGKPT VNNVET+ NVP I++ G E Y+ I S AG KL Sbjct: 195 KRGHPRLKPPYPVQKGLWGKPTVVNNVETIANVPFIISMGWEEYRYIGPSDYAGPKLFPV 254 Query: 253 SGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFE 312 SG+VK PG++ELP TT RE++ YAGG K KA G D + LD+PM++ Sbjct: 255 SGKVKKPGVYELPMNTTLREVIFKYAGGTLGNKKVKAVFSGAL--DCFSSEELDIPMDYS 312 Query: 313 SIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALE 372 +G GT + + E ++V + EF+ E+CG CTPCR G +L + Sbjct: 313 PLGFG----GTGTVIVLTEEDDIVEAALKIAEFYEHETCGQCTPCRVGCYEQANLLEKIY 368 Query: 373 RGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 +GE D E + + R + P + C A ++ ++ F EE+E K+ Sbjct: 369 KGEATEQDWEGFDFVNRNIQP-TSICGLGAVAGRLIRQTLEKFPEEWEKYRKK 420 >UniRef50_A9KQG9 NADH dehydrogenase (Quinone) n=6 Tax=Clostridiales RepID=A9KQG9_CLOPH Length = 628 Score = 474 bits (1220), Expect = e-132, Method: Composition-based stats. Identities = 162/432 (37%), Positives = 244/432 (56%), Gaps = 7/432 (1%) Query: 9 ETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFS 68 + + ++EY + GY+ KAL ++ + IV+++ D+ L+GRGG GF Sbjct: 142 QQTRVALEHCGHINAESINEYIAMGGYQAVAKALFDMTSESIVDEISDSYLRGRGGGGFP 201 Query: 69 TGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRG 128 TG KW+ + + ++ +Y++CN DE +PG + DR +ME PH ++EGM+I+ A KA+ G Sbjct: 202 TGKKWAQVLR-QTEETKYVVCNGDEGDPGAFMDRSMMEGDPHRMIEGMIIAGIATKAHYG 260 Query: 129 YIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALIN 188 YI++R EY A L AI +A GLLG NI+G+GF F L + GAG ++CGE +AL Sbjct: 261 YIYVRAEYPLAVHRLETAIEQARSLGLLGCNILGSGFSFALKISQGAGAFVCGEGSALTA 320 Query: 189 SLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTK 248 S+EG R PR KPP G + KPT +NNVET CNVP+I+ G +WY+ K+ GTK Sbjct: 321 SIEGNRGMPRVKPPRTVEKGLFEKPTVLNNVETFCNVPSIILKGADWYKTYGLEKNYGTK 380 Query: 249 LMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLT----EAH 304 +G V N GL E+P GTT R+++ D GG++ G +FKA Q GG L H Sbjct: 381 AFALTGNVMNTGLIEVPMGTTLRKVIYDIGGGVKGG-EFKAVQIGGPSGGCLVLNAENDH 439 Query: 305 LDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWS 364 LD+P++F+S+ K G+ +G+ + ++ + MV + R F ESCG C PCR+G Sbjct: 440 LDMPLDFDSLKKVGAMIGSGGLVVMNDKSCMVEVARFFMNFTQNESCGKCVPCREGTKRM 499 Query: 365 VKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIK 424 +++L + G G ++ LE+L + C A P+ S IKYFR+E+ A + Sbjct: 500 LELLTDIVEGRGTLEHLDLLEELAETIS-ATALCGLGKTAASPVVSTIKYFRDEYIAHVV 558 Query: 425 QPFSNTHLINGI 436 + Sbjct: 559 DKKCPAGQCKAL 570 >UniRef50_A1VM65 NADH-quinone oxidoreductase, F subunit n=162 Tax=Proteobacteria RepID=A1VM65_POLNA Length = 473 Score = 473 bits (1218), Expect = e-132, Method: Composition-based stats. Identities = 180/423 (42%), Positives = 255/423 (60%), Gaps = 9/423 (2%) Query: 20 DKQPVWLDEYRSKNGYEGARKAL-----TGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWS 74 D L +Y S+ GY+ RK L GL+PD+++ +VK GL+GRGGAGF TGLKWS Sbjct: 43 DGSNWHLGDYESRGGYQALRKILGQDGGAGLTPDQVIAEVKAGGLRGRGGAGFPTGLKWS 102 Query: 75 LMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRG 134 MP+ + +YL+CN+DE EPGT KDR +M+ PH ++EGM I+A+A+ GY ++ G Sbjct: 103 FMPR-QFPGQKYLVCNSDEGEPGTCKDRDIMQYNPHSVIEGMAIAAYAMGISVGYNYIHG 161 Query: 135 EYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRR 194 E A+ EA AGLLG NI+G+ F+F+L G G YICGEET L+ SLEG++ Sbjct: 162 EIFATYQRFEAALDEARAAGLLGDNILGSNFNFQLHAAHGFGAYICGEETGLLESLEGKK 221 Query: 195 ANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSG 254 PR KPPFPA+ G +GKPT +NN ET VP I+ NG Y K + GTK+ SG Sbjct: 222 GQPRFKPPFPASFGLYGKPTTINNTETFAAVPWIIRNGGAAYLECGKPNNGGTKIYSVSG 281 Query: 255 RVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHL-DLPMEFES 313 V+ PG +E+P GT ++LE AGG+R G KA PGG+ + L + + + M+++S Sbjct: 282 DVELPGNYEVPMGTPFAKLLE-LAGGVRKGRTLKAVIPGGSSSPVLPASSMMECTMDYDS 340 Query: 314 IGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALER 373 I KAGS LG+ + +D MV ++ L F+ ESCG CTPCR+G W +++ + Sbjct: 341 IAKAGSMLGSGAVIVMDDSRCMVESLKRLSYFYMHESCGQCTPCREGTGWLWRVVDRIHN 400 Query: 374 GEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLI 433 G G+ D++ L + + G+T CA A P+++ IK++R EFEA I + S Sbjct: 401 GLGRQSDLDLLNSVADNI-QGRTICALGDAAAMPVRAMIKHYRHEFEAMIPKNTSQVAAS 459 Query: 434 NGI 436 G+ Sbjct: 460 KGV 462 >UniRef50_D2BG77 [Fe] hydrogenase, HymB subunit n=6 Tax=cellular organisms RepID=D2BG77_DEHSV Length = 417 Score = 471 bits (1212), Expect = e-131, Method: Composition-based stats. Identities = 173/418 (41%), Positives = 261/418 (62%), Gaps = 8/418 (1%) Query: 9 ETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFS 68 + + R + +D Y + GY+ +KAL+ ++P+E++ +VK + L GRGGA F Sbjct: 2 KDVKIITRHLNTANSADIDVYLADGGYQALKKALS-MTPEEVIAEVKRSKLVGRGGAAFP 60 Query: 69 TGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRG 128 TGLKW L K+++ N +Y++CNA E EPGT+KDRL+++ PH+++EG +I+A+A+ +G Sbjct: 61 TGLKWELTRKEKA-NPKYIVCNASEGEPGTFKDRLILKNDPHMVLEGFIIAAYAVGTSQG 119 Query: 129 YIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALIN 188 +I R Y E ++AI +ATE G LG+NIMG+ F ++ + AG YICGEETAL Sbjct: 120 FIHAREVYTEEIELFQKAIDQATERGFLGQNIMGSNFSLDIQFYKSAGAYICGEETALFE 179 Query: 189 SLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTK 248 SLEG R P ++PP+P G KPT VNNVETLCNVPAI+ NG +W+ +I GTK Sbjct: 180 SLEGHRGIPAARPPYPVQVGLMDKPTTVNNVETLCNVPAIINNGADWFASIGHPDYPGTK 239 Query: 249 LMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLP 308 L SG VK PG++E+P GT +++LE AGG DG KFKA PGG + LTE D+ Sbjct: 240 LFCLSGNVKEPGVFEMPLGTNLKDLLE--AGGGVDG-KFKAVLPGGISSSLLTET--DIS 294 Query: 309 MEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKIL 368 ++F+++ KAG+ LG+ + ++ + +MV++ N+ FF E CG C+ CR+G + +IL Sbjct: 295 LDFKTLAKAGTMLGSGAVIVINSDTSMVNVASNVAHFFDEEGCGKCSICREGTRRAAEIL 354 Query: 369 RALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQP 426 RG+G ++E L +L + + C A+ SAI+ F+ EF A +++ Sbjct: 355 SRFSRGQGNRNELEWLLELHEVMKDTAS-CGLGQVALNVAASAIRNFKGEFLAQVRKE 411 >UniRef50_D0LZ02 NADH-quinone oxidoreductase, F subunit n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LZ02_HALO1 Length = 445 Score = 471 bits (1211), Expect = e-131, Method: Composition-based stats. Identities = 177/436 (40%), Positives = 249/436 (57%), Gaps = 28/436 (6%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 + + + + Y + GY A++AL G++ ++I+ +VK + L+GRGGAGF TG+K Sbjct: 9 VVTQHFGKDEARTIAGYETLGGYAVAKRAL-GMAREQILAEVKASNLRGRGGAGFPTGVK 67 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 W +P +L+CNADE EPGT KDR L+ PH L+EGM++SA AL A YI++ Sbjct: 68 WGFVPA--GSKDVHLVCNADESEPGTCKDRELLFWDPHRLIEGMIVSAHALGAVHNYIYI 125 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 RGE + + L+ A+ EA E G LG NI GTG L VH GAG YICGEETAL+NSLEG Sbjct: 126 RGEMMREVLVLQDAVREAYERGYLGDNIFGTGKACHLTVHRGAGAYICGEETALLNSLEG 185 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISK--SKDAGTKLM 250 R PR KPPFPA G +G PT VNNVETL NVP I+ G W+ + + GT+++ Sbjct: 186 LRGQPRLKPPFPAVKGLFGNPTVVNNVETLMNVPTIIDKGGAWFAALGPEGGRSGGTRIV 245 Query: 251 GFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPME 310 SG V+ PG++ELP T +++++ GG+ G K KA PGG+ LT LD+P+E Sbjct: 246 CVSGHVEKPGVYELPMTITFNQLIDEVCGGVWKGRKVKAVIPGGSSMPPLTAEELDVPIE 305 Query: 311 FESI----------------------GKAGSRLGTALAMAVDHEINMVSLVRNLEEFFAR 348 F+++ + G+ + +D ++V + +F+A Sbjct: 306 FDALMTDERIRPVEVLRGQQFDMGGGRALRTMAGSGGIVVMDDHTDVVKACWRIMKFYAH 365 Query: 349 ESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPL 408 ESCG CTPCR+G W +I R + G G+PGDI+ L Q+ + G + CA A P+ Sbjct: 366 ESCGQCTPCREGTGWLEQICRRVAHGGGKPGDIDLLAQISHGIA-GNSICALGEAAAWPM 424 Query: 409 QSAIKYFREEFEAGIK 424 I FR+EFEA Sbjct: 425 MGFITKFRDEFEAKCA 440 >UniRef50_Q2S5I8 Respiratory-chain NADH dehydrogenase 51 Kd subunit family n=4 Tax=Bacteroidetes/Chlorobi group RepID=Q2S5I8_SALRD Length = 464 Score = 470 bits (1209), Expect = e-131, Method: Composition-based stats. Identities = 187/433 (43%), Positives = 262/433 (60%), Gaps = 10/433 (2%) Query: 7 TPETHPLTWR------LRDDKQPVWLDEYRSKNGYEGARKALTG--LSPDEIVNQVKDAG 58 TP++ WR L + L Y GY+ R+ L P ++ ++VK +G Sbjct: 17 TPQSPAGDWRSYERMLLPPIQDLHKLGVYEEHGGYDRLRRVLEDDAFEPSDVTDEVKASG 76 Query: 59 LKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLI 118 L GRGGAGF TG+KW+ MP+ + R++ NADE EPGT+KDR +ME PHL++EG+L+ Sbjct: 77 LTGRGGAGFPTGIKWTFMPEPD-ERPRFIGVNADESEPGTFKDRQVMEYNPHLMLEGILL 135 Query: 119 SAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRY 178 + +AL Y+++RGEY + V+L+ + A EAG +G+NIMG+ F ++ +H GAG Y Sbjct: 136 AGYALHIDTAYVYIRGEYTDWIVHLKEQLENAYEAGYVGENIMGSDFTMDIVLHKGAGAY 195 Query: 179 ICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQN 238 ICGEET+L+ SLEG+R PR KPPFPA SG +G PT +NN ETL +VP I+ G E Y N Sbjct: 196 ICGEETSLMESLEGKRGYPRYKPPFPAQSGIFGSPTTINNAETLAHVPLIVEQGGEAYSN 255 Query: 239 ISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTD 298 I G L G SG VKNPG++E P G +++ D GGM KA PGG+ Sbjct: 256 IGAGDMPGPALYGMSGHVKNPGVYEFPTGMLLTDMIYDVCGGMARDKDLKAVVPGGSSVP 315 Query: 299 FLTEAHLD-LPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPC 357 + +D + M ES+G+ GSR GT + +D E +MVS +R + F+ E+CG CTPC Sbjct: 316 PVPADQIDGISMNDESLGEVGSRTGTFCPLVLDEETDMVSFLRRVAHFYQDETCGQCTPC 375 Query: 358 RDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFRE 417 R+G W KIL ++ GEG+ DI+ L +LC + G+T CA A GAV P+++ +K FRE Sbjct: 376 REGTSWLEKILARIDEGEGRMRDIDLLLELCDNMDGGRTICAFADGAVGPVRATVKRFRE 435 Query: 418 EFEAGIKQPFSNT 430 EF A + Sbjct: 436 EFAAKCQASVHPV 448 >UniRef50_Q20Z43 NADH dehydrogenase (Quinone) n=2 Tax=Rhodopseudomonas palustris RepID=Q20Z43_RHOPB Length = 428 Score = 467 bits (1203), Expect = e-130, Method: Composition-based stats. Identities = 215/426 (50%), Positives = 276/426 (64%), Gaps = 6/426 (1%) Query: 10 THPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFST 69 PLT R + ++P E++ GY+ R AL SPD +V V+D+GL+GRGGAGF T Sbjct: 3 ETPLTGRAQPGREPHRFAEWQRLGGYDALRGALQRHSPDALVTIVEDSGLRGRGGAGFLT 62 Query: 70 GLKWSLMPKDE---SMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAY 126 G KW LM K RYL N DEMEPG++KDRLLME LPH L+EG +++A+A+ A Sbjct: 63 GTKWRLMRKAAEAAGDGPRYLCVNGDEMEPGSFKDRLLMEALPHQLIEGAMLAAYAIGAT 122 Query: 127 RGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETAL 186 I +R Y AAV L RAI EA AGLLG+NI+G+GF ++ +HT AGRYI GEETAL Sbjct: 123 EVIILVRDAYRAAAVALTRAITEAESAGLLGRNILGSGFGLKMRLHTSAGRYIVGEETAL 182 Query: 187 INSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAG 246 I ++EG R PR +PP+PA SG WG+PT VNNVETL VP I+ NG EW+Q +S++ + G Sbjct: 183 IAAIEGERPVPRHRPPYPAQSGLWGRPTTVNNVETLSAVPHIVQNGAEWFQGLSRTAEGG 242 Query: 247 TKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLD 306 TKL G SGRV P L E P GT A E++E AGG+RDG K A+QPGG T FL EA LD Sbjct: 243 TKLYGISGRVARPQLIEAPMGTPAGELIE-MAGGIRDGRKLLAFQPGGGATAFLQEAELD 301 Query: 307 LPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVK 366 +PM+F + KAGS LGT + +D + V+ + F+ARESCG CTPCRDGLPW K Sbjct: 302 VPMDFAHVKKAGSSLGTGAVIVLDDQSCPVAAIGRHARFYARESCGLCTPCRDGLPWVAK 361 Query: 367 ILRALERGEGQPGDIETLEQLCRFLGP-GKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 +L ALE G G+P DI+ L GP G++FC GA+ P++S ++ F + F A + Sbjct: 362 LLDALEAGHGKPEDIDLLHMHVELAGPSGRSFCDLMAGAMTPVKSGLERFGDIFAAHL-N 420 Query: 426 PFSNTH 431 Sbjct: 421 GHCPVR 426 >UniRef50_C9RJK0 NADH dehydrogenase (Quinone) n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJK0_FIBSS Length = 435 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 174/419 (41%), Positives = 248/419 (59%), Gaps = 6/419 (1%) Query: 20 DKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKD 79 K ++ Y+ GY + L +S E+++ V+ + L+GRGGAGF TG+KWS +P+ Sbjct: 13 GKGAQDIEVYKKLGGYSNISERLFNMSQFELIDYVQRSNLRGRGGAGFPTGMKWSFVPRG 72 Query: 80 ESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEA 139 + Y++ NADE E GT+KD LM + PH L+EG++I+A+AL + YI+ RGE++ Sbjct: 73 TGKPV-YIVVNADEGEGGTFKDHFLMLEDPHRLIEGLIIAAWALGSRAAYIYCRGEFLPC 131 Query: 140 AVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRS 199 L +A+ +A AG LG+NI GT F F++FVH GAG YICGEETALINSLEG++ PR Sbjct: 132 IEALNKALNQAYAAGYLGENICGTKFSFDIFVHRGAGAYICGEETALINSLEGQKGQPRL 191 Query: 200 KPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNP 259 KPPFPA GAW PTCVNNVET+ ++P IL++ Y + + GTK+ SG VKNP Sbjct: 192 KPPFPAVCGAWKSPTCVNNVETIMSLPWILSHDPSDYAKMGTPRAGGTKVFCISGDVKNP 251 Query: 260 GLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLP-MEFESIGKAG 318 G++E P GT ++ DYAGG+ G K KA PGG+ LT + M++E + Sbjct: 252 GVYEAPLGTPMMTMINDYAGGVVGG-KLKAVLPGGSSCAPLTAEEAAVATMDYECLASMK 310 Query: 319 SRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQP 378 + G+ + ++ NMV L+ L F++ ESCG CTPCR+G +IL + G G Sbjct: 311 TMFGSGAMIVINDTHNMVDLLNCLGNFYSHESCGQCTPCREGTGLLHRILNQMVAGNGHD 370 Query: 379 GDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLINGIQ 437 GD+E ++ L G G T C + P+ S FR +F+ I + + H IQ Sbjct: 371 GDVELMQSLSSGFG-GVTICPLSISLGGPVSSYTAKFRADFDEYIAK--NPEHAKPRIQ 426 >UniRef50_C6SUV8 MIP04331p (Fragment) n=3 Tax=Drosophila melanogaster RepID=C6SUV8_DROME Length = 704 Score = 462 bits (1190), Expect = e-129, Method: Composition-based stats. Identities = 167/408 (40%), Positives = 238/408 (58%), Gaps = 4/408 (0%) Query: 20 DKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKD 79 + L + + ++ + IVN++K +GL+GRGGAGF +GLKWS M K Sbjct: 272 GRHDWRLKAAMKRGDWYKTKEIIAKGDK-WIVNEIKTSGLRGRGGAGFPSGLKWSFMHKP 330 Query: 80 ESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEA 139 ++L+ NADE EPGT KDR +M PH LVEG LI+ A+ A G+I++RGE+ Sbjct: 331 PDGRPKFLVVNADEGEPGTCKDREIMRHDPHKLVEGCLIAGRAMGANTGFIYIRGEFYNE 390 Query: 140 AVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRS 199 A NL+ AI EA +AG LGKN G+GFDF+L+V GAG YICGEET+LI SLEG+ PR+ Sbjct: 391 ACNLQYAIIEAYKAGYLGKNACGSGFDFDLYVQRGAGAYICGEETSLIESLEGKAGKPRN 450 Query: 200 KPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNP 259 KPPFPA G +G P+ V NVET+ P I G W+ + +++++GTKL SG V NP Sbjct: 451 KPPFPADIGVFGCPSTVTNVETVAVSPTICRRGGNWFASFGRTRNSGTKLFNISGHVCNP 510 Query: 260 GLWELPFGTTAREILEDYAGGMRDGL-KFKAWQPGGAGTDFLTEAHLDLPM-EFESIGKA 317 E RE++E +AGG+ G A PGG+ T +T+ H + +++ + Sbjct: 511 CTVEEEMSMPTRELIERHAGGVIGGWDNLLAIIPGGSSTPCITKEHASSAIHDYDGLMAV 570 Query: 318 GSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQ 377 S +GT + ++ + +++ + L F+ ESCG CTPCR+GL W I+ G+ Q Sbjct: 571 RSSMGTGALIVMNKDTDIIKAIARLSAFYKHESCGQCTPCREGLHWVNMIMHRFVTGQAQ 630 Query: 378 PGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 +I+ L +L + + G T CA A GA P Q I+ FR E IK+ Sbjct: 631 IAEIDMLFELTKQI-EGHTICALADGAAWPPQGLIRNFRPVIEERIKK 677 >UniRef50_D1N816 NADH dehydrogenase (Quinone) n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N816_9BACT Length = 573 Score = 458 bits (1178), Expect = e-127, Method: Composition-based stats. Identities = 160/423 (37%), Positives = 237/423 (56%), Gaps = 9/423 (2%) Query: 14 TWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKW 73 L P ++Y + +GY+G KAL ++ ++V++VK +GL+GRGG GF TG KW Sbjct: 101 VLALAGRIDPTSFEDYVAHDGYKGLEKALA-MTSQQVVDEVKLSGLRGRGGGGFPTGNKW 159 Query: 74 SLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLR 133 + ++ + + L+CNADE +PG + DR LME PH ++EGMLI+A+A A + +I+ R Sbjct: 160 GFLAAKQA-DEKILICNADEGDPGAFMDRSLMESAPHQVLEGMLIAAYATGATKLFIYCR 218 Query: 134 GEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGR 193 EY A +L+ AIA+ E L N G + E+ + GAG ++CGEETALI SLEG+ Sbjct: 219 AEYPMAIKHLKIAIAQIYEHKLNVVN----GRELEIIIKEGAGAFVCGEETALIASLEGQ 274 Query: 194 RANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFS 253 R PR +PPFP G G P+ +NNVET NVP IL G + ++ GTKL + Sbjct: 275 RGTPRFRPPFPTDKGWMGHPSMINNVETFGNVPLILREGAAAFASVGTEGSKGTKLFALA 334 Query: 254 GRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFES 313 G +K+PGL E+P GTT REI+ D G D K KA Q GG + D P++++S Sbjct: 335 GDLKHPGLVEVPMGTTLREIVFDIGG--ADPEKVKAVQTGGPSGGCIPVELFDTPVDYDS 392 Query: 314 IGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALER 373 + K G+ +G+ + + + MV R +F RESCG CT CR G + L + Sbjct: 393 LRKLGAIMGSGGMIVIGKDRCMVETARYFLDFTHRESCGKCTFCRVGTTRMYETLERIVA 452 Query: 374 GEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLI 433 G+G D+ LE L + G + C A P+ + ++Y+R E+EA ++ + Sbjct: 453 GKGSMEDLALLEDLGPKIRMG-SLCGLGQTAPNPVLATLRYYRHEYEAHVRDRQCDALQC 511 Query: 434 NGI 436 N + Sbjct: 512 NAL 514 >UniRef50_B6JB78 NADH dehydrogenase i chain f n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JB78_OLICO Length = 620 Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats. Identities = 171/418 (40%), Positives = 238/418 (56%), Gaps = 11/418 (2%) Query: 3 NIIRTPETHP---LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGL 59 I+ P+ + + P +D+Y + +GY G R+A + P +++ +VKD+ L Sbjct: 196 PIMAVPQAGQDGLMLLKRIGKVDPESIDDYLATDGYAGLRRAF-EMEPAQVITEVKDSRL 254 Query: 60 KGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLIS 119 GRGGA F G+KW K + RYL+CNADE EPGT+KDR ++E P L+E M I+ Sbjct: 255 MGRGGAAFPAGIKWESTAKQPATP-RYLVCNADESEPGTFKDRSILEGDPFALIESMTIA 313 Query: 120 AFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYI 179 +A+ A RGYI+LRGEY A L AI +A E G LG+NI G G+ FEL + GAG YI Sbjct: 314 GYAIGAERGYIYLRGEYPRAYRMLSNAIEKARERGFLGENIQGKGWSFELEIRRGAGAYI 373 Query: 180 CGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNI 239 CGEETA+ NS+EG R PR+KPPFP +G +GKPT VNNVETLCNVP I+ G Y I Sbjct: 374 CGEETAIFNSIEGYRGEPRTKPPFPFEAGLFGKPTVVNNVETLCNVPLIMQLGGAEYAKI 433 Query: 240 SKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDF 299 G KL SG + PG++E+PFG T +ILE AGG+ G K +A GGA F Sbjct: 434 GTEGSTGPKLFCVSGNLVRPGVYEVPFGATLGDILE-LAGGVPQGRKLQAVLLGGAAGVF 492 Query: 300 LTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRD 359 + LD+P+ FE + A + LG+ + +A D +++ ++ + FF ESCG C PCR Sbjct: 493 VRADELDIPLTFEGVRAAKATLGSGVVLAFDDTVDLSGILLRIASFFRDESCGQCVPCRV 552 Query: 360 GLPW----SVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIK 413 G ++I+ + + DI L + + + C A ++SAI Sbjct: 553 GTVRQEEALLRIMHNGHDAKAKGNDIHILRDVGLVMKDA-SICGLGQAAWNAVESAID 609 >UniRef50_C4XMN9 NADH-quinone oxidoreductase chain F n=5 Tax=Deltaproteobacteria RepID=C4XMN9_DESMR Length = 454 Score = 454 bits (1168), Expect = e-126, Method: Composition-based stats. Identities = 186/421 (44%), Positives = 261/421 (61%), Gaps = 4/421 (0%) Query: 12 PLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGL 71 + ++ R +P +DEY + GYE R + +P E++ V DA L+GRGGAGF G Sbjct: 7 QVLFKNRHLGRPATIDEYLAGGGYEALRATIGQRTPAEVLQLVLDADLRGRGGAGFPAGR 66 Query: 72 KWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIF 131 KW +P D + RY++ N DEMEPGT+KDR+L+ PHL++EG+++ A+A+ A G F Sbjct: 67 KWQGIPADH-VGTRYVVINTDEMEPGTFKDRILVNVDPHLVIEGIILCAYAVGACEGVFF 125 Query: 132 LRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLE 191 +R Y A + + A E G LGKNI+GT F F++ VH AGRYICGE +A I ++ Sbjct: 126 IRPSYEGDAKLIEQETQVARERGYLGKNILGTDFCFDVHVHRSAGRYICGEASAQIKAIS 185 Query: 192 GRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKD-AGTKLM 250 G R NPR P + G W PT VNN+ETL N+P I+ NG W++++++S+ +GTKL Sbjct: 186 GLRPNPRKGGPRTSVKGLWDCPTIVNNLETLANLPGIVRNGPAWFKSLARSESGSGTKLY 245 Query: 251 GFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPME 310 SG+V PG +ELP G T R+I+ +AGGM G FK PGGA T +L EA LDL M+ Sbjct: 246 SVSGQVARPGCYELPIGVTIRDIIFTHAGGMAPGKTFKTVIPGGASTPYLPEALLDLEMD 305 Query: 311 FESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRA 370 F+ + KAG R GTA M D + +V +L EFFARESCGWCTPCR+G+P+ ++LR Sbjct: 306 FDPMRKAGQRFGTASLMVFDQDTCLVGATLSLMEFFARESCGWCTPCREGIPYVRELLRR 365 Query: 371 LERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNT 430 +E GEG + L+++ L +CA APGA EPL+ + +F +E +A I + Sbjct: 366 IEGGEGTEEHVGMLQEMLPVLDLA--YCAFAPGAAEPLRGLLTHFMDEVQAHITEKRCPF 423 Query: 431 H 431 Sbjct: 424 G 424 >UniRef50_C1AB34 NADH-quinone oxidoreductase chain F n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AB34_GEMAT Length = 439 Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats. Identities = 150/404 (37%), Positives = 238/404 (58%), Gaps = 3/404 (0%) Query: 23 PVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESM 82 L Y+++ GY+ +KALT + P ++ +V +GL G GGA F G KW ++ + Sbjct: 16 SHSLAAYKARGGYQSLQKALTSMQPTDVTKEVAASGLLGHGGAAFPAGRKWGVIKLTDGE 75 Query: 83 NIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVN 142 Y+ NADE EPGT+KDR L+E +PHL +EG++++++A+ +I++RGE+ Sbjct: 76 P-HYVCMNADEGEPGTFKDRWLLEHVPHLCIEGLILASYAIMGRHAFIYIRGEFDLPFRR 134 Query: 143 LRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPP 202 LR AI EA AGLLG+NI+GTG+ ++ ++ GAG Y+CGE +A++ SLEG++ PR++PP Sbjct: 135 LRDAIEEAYAAGLLGENILGTGYSLDIVLYRGAGSYVCGEASAMLASLEGKKGWPRNRPP 194 Query: 203 FPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLW 262 G + +PT VNNVETL N+PAI+ G E ++ + K GT+++ SG + PG++ Sbjct: 195 RLTVKGLYQRPTVVNNVETLANIPAIIGEGGETFRKVGLPKSPGTQMISISGHLVRPGVY 254 Query: 263 ELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLD-LPMEFESIGKAGSRL 321 E+ +G + + + + GG+ G K PGG T L L ++ S AGS++ Sbjct: 255 EIEYGYSWEKFIYEDCGGILGGRALKCVIPGGVSTKILDANELKGRTLDHNSALAAGSQI 314 Query: 322 GTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDI 381 G+ + + MV + R ++ F+ ESCG CTPCR+G+ W +IL + RGEG+P DI Sbjct: 315 GSGGMIVIAEGTCMVRVARVIQRFYHHESCGQCTPCREGMGWMERILDRIVRGEGRPEDI 374 Query: 382 ETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 + L + G T C+ A + + ++R+EFE I Sbjct: 375 DRLYHISTA-NDGTTICSLGDSAGYACSAILDHYRDEFEHFITH 417 >UniRef50_B2V6E9 NADH dehydrogenase (Quinone) n=18 Tax=Bacteria RepID=B2V6E9_SULSY Length = 523 Score = 452 bits (1162), Expect = e-125, Method: Composition-based stats. Identities = 167/407 (41%), Positives = 240/407 (58%), Gaps = 3/407 (0%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 +T+ P+ + +Y+S G+ G +KA++ + +EI+ ++K +GL+GRGGAGF TG+K Sbjct: 108 ITFERVGLVDPLSIKDYQSNGGFLGLKKAIS-MKSEEIIEEIKKSGLRGRGGAGFPTGIK 166 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 W + K S +Y++CNADE + GT+ DR++ME P LL+EGM+I+ A+ A GYI+L Sbjct: 167 WETVFKTGSDK-KYVVCNADEGDSGTFSDRMIMESDPFLLIEGMVIAGLAVGADEGYIYL 225 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 R EY A L +AI A + LGKNI+G+G DF+L V+ GAG Y+CGEETAL+ SLEG Sbjct: 226 RSEYPLAKEVLTKAIDLAYKNRYLGKNILGSGKDFDLEVYVGAGSYVCGEETALLESLEG 285 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGF 252 +R R KPP+PA +G W KPT +NNV TL VP I+ G + Y N K GT + Sbjct: 286 KRGVVRPKPPYPAINGLWNKPTLINNVNTLATVPWIIREGGDKYFNYGVGKSRGTIAIQL 345 Query: 253 SGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFE 312 SG VK+PGL E+PFG + ++I+ + GG + G K KA GG ++ E+ D+ +++E Sbjct: 346 SGNVKHPGLVEVPFGISIKDIVYGFGGGTKTGKKVKAALIGGPFGIYIPESMFDISIDYE 405 Query: 313 SIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALE 372 S+ K G +G + D E ++ L R EF ESCG C PCR G ++IL L Sbjct: 406 SLSKIGGTIGHGSIVVFDEEADLKYLARFAMEFCFIESCGKCAPCRIGSIRGLEILDKLL 465 Query: 373 RGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEF 419 I L + + C A +P+ S K+F EEF Sbjct: 466 NQGRDERLISMFVDLSEVM-INTSLCGLGGMAPKPILSLFKHFPEEF 511 >UniRef50_A9EX79 NADH dehydrogenase (Ubiquinone) n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9EX79_SORC5 Length = 450 Score = 450 bits (1158), Expect = e-125, Method: Composition-based stats. Identities = 174/436 (39%), Positives = 243/436 (55%), Gaps = 26/436 (5%) Query: 14 TWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKW 73 + D L Y GY+ A++AL G++ + +V ++K A ++GRGGAGF+ G+KW Sbjct: 8 LTKNYDTPDGHKLAVYEKGGGYQQAKRAL-GMTREALVEEMKAANIRGRGGAGFAMGVKW 66 Query: 74 SLMP-KDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 S MP + YL+ NADE EPGT+KDR LME+ PH +VEG +I F + A+ YI++ Sbjct: 67 SFMPWPPKPERPHYLVINADEGEPGTFKDRTLMEKNPHAVVEGCIIGCFGIGAHAAYIYV 126 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 R E + L AI EA G LGK G + E++VHTGAG YICGEET+L+NSLEG Sbjct: 127 RDELHLSKARLWGAIEEARAKGYLGKRPFGIDYPVEVYVHTGAGAYICGEETSLLNSLEG 186 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNIS---KSKDAGTKL 249 +R PR KPPFPA GA+G PT VNN+ET+ VP L G E + +S KD G +L Sbjct: 187 KRGEPRLKPPFPAQFGAFGMPTTVNNLETIAAVPTALELGGENFSKLSSLHHLKDGGCRL 246 Query: 250 MGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAH----- 304 G SG V NPG++E G T R+++ +Y GG++ G K PGG+ L Sbjct: 247 FGVSGHVNNPGIFEAAVGVTLRDLIYEYGGGVKHG-KLLGVIPGGSSCPILRADEVVNAP 305 Query: 305 --------------LDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARES 350 LD+P+ ++ G+ LGT A+ + + V + NL F+ ES Sbjct: 306 SDKSPLHPWHGQSVLDVPLGVDTFRALGTMLGTCCAIVLSDKACPVLAMHNLMRFYRHES 365 Query: 351 CGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQS 410 CG CTPCR+G W +IL + GEG +++ L ++ + G T CA G P Sbjct: 366 CGQCTPCREGSAWIHRILDRIVHGEGTIEELDRLHEIADNIM-GNTICAFGEGTAMPALG 424 Query: 411 AIKYFREEFEAGIKQP 426 ++ FR+EFEA I+ Sbjct: 425 FLRKFRKEFEAYIQTK 440 >UniRef50_C1YSE4 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit n=4 Tax=Actinomycetales RepID=C1YSE4_NOCDA Length = 656 Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats. Identities = 168/412 (40%), Positives = 235/412 (57%), Gaps = 4/412 (0%) Query: 2 KNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKG 61 + + R P+ LD+YR+ GY R+AL L P ++ +V D+GL G Sbjct: 222 AAVPDAGSPDHVLLRRIGTVDPLSLDDYRAAGGYAALRRAL-RLGPAGVIREVSDSGLVG 280 Query: 62 RGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAF 121 RGGA F TG KW + + YL+CNADE EPGT+KDR+LME P +VE M I+ + Sbjct: 281 RGGAAFPTGRKWQATAQ-QPDGPHYLVCNADESEPGTFKDRVLMEGDPFSVVEAMTIAGY 339 Query: 122 ALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICG 181 A+ A GY+++RGEY A +L A+A A GLLG +I+G+GF F++ + GAG YICG Sbjct: 340 AVGARTGYLYIRGEYPRALRHLENAVALARGRGLLGPDILGSGFAFDIEIRRGAGAYICG 399 Query: 182 EETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISK 241 EETA+ S+EG+R PRSKPPFP G +GKPT VNNVETL NV +L G Y + Sbjct: 400 EETAIFGSIEGQRGEPRSKPPFPVEKGLFGKPTAVNNVETLVNVLPVLLMGGPAYAAVGT 459 Query: 242 SKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLT 301 + G KL SG V+ PGL+ELPFG T R+++E AGGM +G +A GGA F+ Sbjct: 460 GQSTGPKLFCLSGGVRRPGLYELPFGATLRDLIE-AAGGMPEGRTIQAVLLGGAAGTFVR 518 Query: 302 EAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGL 361 LD+P+ FE AG+ LG+ + + +D ++V+ + + FF ESCG C PCR G Sbjct: 519 GDELDIPLTFEGARAAGTSLGSGVVLVLDDTADLVATLVRVAAFFRDESCGQCVPCRVGT 578 Query: 362 PWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIK 413 + L + G ++ L ++ + + C A ++SAI Sbjct: 579 VRQEESLLRIRAGGDAAAEVPLLREVGLAMRDA-SICGLGQTAWNAVESAID 629 >UniRef50_C7M2U2 NADH dehydrogenase (Quinone) n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2U2_ACIFD Length = 432 Score = 447 bits (1151), Expect = e-124, Method: Composition-based stats. Identities = 169/429 (39%), Positives = 246/429 (57%), Gaps = 14/429 (3%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 + + L+ + + +G G R+AL L+P+++ +V +A L GRGGAGF G K Sbjct: 6 IVGARLGYEDSYTLERFLATDGDAGLRRALLELTPEQVHAEVLEANLLGRGGAGFEAGRK 65 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 WS++ K RYL+ N DE EP T+KD LL+E+ PH LVEG I+A+A+ A +I+L Sbjct: 66 WSMLRKA---PRRYLVVNGDESEPATFKDHLLVERDPHQLVEGATIAAYAIGASVAFIYL 122 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 RGE+ +++AI +A G LG+NI G+GF ++ + GAG YICGEETAL+ SLEG Sbjct: 123 RGEFALGLERVQQAINDAYARGALGRNIFGSGFSLDIVLQPGAGAYICGEETALLESLEG 182 Query: 193 RRANPRSKPP-FPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMG 251 +R PR KPP FPA G +G PT VNNVET+ N+P I+ +G ++ + + GT++ Sbjct: 183 KRGFPRIKPPYFPAVIGLYGAPTIVNNVETVSNLPWIVRHGGAAFRALGAGRSTGTRIFA 242 Query: 252 FSGRVKNPGLWELPF-GTTAREILE--DYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLP 308 SG V+ PG +E+ T RE++ Y G+ + +A+ PGG + +L HLDLP Sbjct: 243 LSGSVRRPGAFEVEMTSVTFRELIYGDAYGQGLEPDRELRAFIPGGVSSPWLFPEHLDLP 302 Query: 309 MEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKIL 368 + + + KAGS LG+ + +D V + FFARESCG CTPCR+G W ++L Sbjct: 303 LGQDEVAKAGSMLGSGSIIVMDDGDCPVRAAWRIARFFARESCGQCTPCREGGTWIEQVL 362 Query: 369 RALERGEGQPGDIETLEQLCRFLGPG-------KTFCAHAPGAVEPLQSAIKYFREEFEA 421 R LE G G+ D++ L C + PG T C P + +AI+ FR+ F Sbjct: 363 RRLELGYGREEDLDLLLDACDNISPGVTWPPAQTTICVLGPSIPPSVVAAIRRFRDVFLT 422 Query: 422 GIKQPFSNT 430 IK+ Sbjct: 423 HIKEERCPY 431 >UniRef50_B5ICD1 Respiratory-chain NADH dehydrogenase 51 Kd subunit family n=2 Tax=Aciduliprofundum boonei T469 RepID=B5ICD1_9EURY Length = 404 Score = 443 bits (1140), Expect = e-123, Method: Composition-based stats. Identities = 166/405 (40%), Positives = 240/405 (59%), Gaps = 6/405 (1%) Query: 21 KQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDE 80 K +++Y ++ G++ RKAL DEI+ +V+ +GL GRGGA F TGLK + K++ Sbjct: 5 KDASNVEDYLAQGGFKALRKAL-EYGQDEIIREVEISGLLGRGGAAFPTGLKMKFVRKEK 63 Query: 81 SMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAA 140 S +Y++ NADE EPGT+KDR+LME+ P+ ++EGM+IS +A+ A +G+ ++R EY E A Sbjct: 64 STP-KYIVANADEGEPGTFKDRVLMERNPYQILEGMIISGYAIDAKKGFFYIRYEYKEIA 122 Query: 141 VNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSK 200 +++R I E G+LG NI G F F++ + GAG Y+CGEETAL+ S+EG+R PR K Sbjct: 123 KDIKRKIEELRRLGILGPNIYGPKFSFDIELVVGAGAYVCGEETALMESIEGKRGYPRIK 182 Query: 201 PPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPG 260 PP+PA G WGKPT +NNVETL N+P +++ G Y + K G KL SG VKNPG Sbjct: 183 PPYPAQYGLWGKPTLINNVETLANIPIVMSMGGANYSKLGKEGCTGPKLFSVSGFVKNPG 242 Query: 261 LWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDF-LTEAHLDLPMEFESIGKAGS 319 ++E G + + AGG K K GG F L E HLDLP+ F+ + G Sbjct: 243 VYEANLGDKTIGEMIELAGGAEG--KIKGIMLGGGAAGFILNEEHLDLPLCFKDAKERGL 300 Query: 320 RLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPG 379 LGT + + + + ++ N+ +FF ESCG C PCR G +I+ + RG+G+ Sbjct: 301 FLGTGNIIVFNESVGLWDVLLNISKFFEHESCGQCFPCRYGTKRMREIIEKIVRGDGRKE 360 Query: 380 DIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIK 424 DIE L R + + C A+ +SA+K F EE I+ Sbjct: 361 DIEKLNATARAMKIA-SLCPLGASAMLAYESAMKNFHEELMGVIQ 404 >UniRef50_Q2LQE7 NADH-quinone oxidoreductase chain F n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LQE7_SYNAS Length = 574 Score = 443 bits (1140), Expect = e-123, Method: Composition-based stats. Identities = 175/414 (42%), Positives = 241/414 (58%), Gaps = 15/414 (3%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 + + R K L + Y+ KA + P+EI+ +VK A L+GRGGAGF G+K Sbjct: 175 VLLKNRGVKDATALAVAKGNGAYQALAKA-GTMKPEEILEEVKKANLRGRGGAGFPAGVK 233 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 W +PKD + YL+CNADE EPGTYKDR +ME PHLL+EGM I+A A+ A + +I++ Sbjct: 234 WGFIPKDTDKPV-YLICNADEGEPGTYKDRQIMEYDPHLLIEGMAIAARAIGARQAFIYI 292 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 RGE+ A L +AI EA G L + ++ VH GAG Y+CGEETALI S+EG Sbjct: 293 RGEFAWIADILEKAIGEAKADGQLSE--------LDIIVHRGAGAYVCGEETALIESIEG 344 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGF 252 +R PR +PPFPA G +G PT VNNVETL +VP I+ G E ++ + G KL G Sbjct: 345 KRGQPRIRPPFPAVEGLYGCPTIVNNVETLASVPFIIEKGAEAFKQWGFENNYGFKLFGI 404 Query: 253 SGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHL-DLPMEF 311 SG V PG++E P G + E++E AGG++ K KA GG L L DL M++ Sbjct: 405 SGCVNKPGVYEYPLGVSFNELME-AAGGVKG--KLKAAIVGGLSVAILKAEELQDLTMDY 461 Query: 312 ESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRAL 371 +S K G+ LG+ M + + ++ L +F+A ESCG C PCR+G VKIL L Sbjct: 462 DSCAKHGTGLGSGGIMVISEDFSIPELALRTIKFYAHESCGKCVPCREGSYTLVKILHKL 521 Query: 372 ERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 G+G+ DIE + +C + G T C P+Q+ ++ FR EF+A IK+ Sbjct: 522 LSGQGEAADIEKILGICNTV-RGLTLCPTGEAFAVPIQAMVEKFRSEFDALIKK 574 >UniRef50_C8QXK3 NADH dehydrogenase (Quinone) n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QXK3_9DELT Length = 601 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 164/447 (36%), Positives = 247/447 (55%), Gaps = 25/447 (5%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 + ++ P ++ Y + GY L P EI++++ +GL+GRGG G+ GLK Sbjct: 147 VVLEQFENIDPERIESYLAAGGYRALLDCLHHRRPVEIIDEITRSGLRGRGGGGYPVGLK 206 Query: 73 WSLMPKDES----------------------MNIRYLLCNADEMEPGTYKDRLLMEQLPH 110 WS + K + +Y++CNADE +PG + DR ++E PH Sbjct: 207 WSTVAKAGAFVPQAGRSSRQSAGATAADRPDGPRKYVICNADEGDPGAFMDRSVLECAPH 266 Query: 111 LLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELF 170 ++EGM I+A+A+ A GY+++R EY A LR+AI +A + GLLG+NI G+ F+F++ Sbjct: 267 RVLEGMAIAAYAVGADFGYLYVRAEYPLAVERLRKAIVQAEKRGLLGRNIGGSAFNFQVE 326 Query: 171 VHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILA 230 + GAG ++CGEETAL+ S+EGRR PR +PP+PA G WG PT +NNVETL NV AI+ Sbjct: 327 IRLGAGAFVCGEETALLASIEGRRGQPRPRPPYPAEHGLWGCPTLINNVETLANVAAIIN 386 Query: 231 NGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAW 290 G +W+ + K GTK+ +G++KN GL E+P G + EI+ + G G KA Sbjct: 387 RGADWFAALGTEKSKGTKVFALAGKIKNTGLIEVPMGISIHEIVHEMGSGEVGG--IKAV 444 Query: 291 QPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARES 350 Q GG + H LP+++ES+ GS +G+ + +D MV + R EF ES Sbjct: 445 QTGGPSGGCIPAEHFHLPVDYESLQAEGSIMGSGGMIIMDEGAAMVDVARFFMEFCVEES 504 Query: 351 CGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQS 410 CG C PCR G + +L + RGEG D+ LE+LC L + C A P+ S Sbjct: 505 CGKCAPCRVGTTQVLLLLEKIGRGEGTAADLGQLEELCHLLQQ-TSLCGLGQSAANPVLS 563 Query: 411 AIKYFREEFEAGIKQPFSNTHLINGIQ 437 +++FR E+E + ++ +G Q Sbjct: 564 TLRFFRREYEQLLVDNTGKSNETDGSQ 590 >UniRef50_B8D1I1 NADH dehydrogenase I subunit F n=2 Tax=Bacteria RepID=B8D1I1_HALOH Length = 408 Score = 433 bits (1113), Expect = e-120, Method: Composition-based stats. Identities = 152/410 (37%), Positives = 238/410 (58%), Gaps = 10/410 (2%) Query: 13 LTWRLRDDKQPV-WLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGL 71 +T RL + V D Y+ + ++AL + +I+ ++K +GL+GRGGAGF TGL Sbjct: 1 MTERLFLKQNEVSDFDSYK----FPALKRAL-DMDKKDIIEELKKSGLRGRGGAGFPTGL 55 Query: 72 KWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIF 131 KW L K+++ +Y++CN DE EPGT+KDR L+E P ++EG+LI A+ + A++GYI+ Sbjct: 56 KWELALKEKA-GEKYIICNGDEGEPGTFKDRYLLENSPLKVLEGILIGAYTIGAHQGYIY 114 Query: 132 LRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLE 191 +RGEY R+ I EA + G+LG +MG+ + F+L + GAG Y+CG+ET+LINS+E Sbjct: 115 IRGEYALPINIFRQVIKEAKKRGILGNRVMGSDYSFDLKLIKGAGAYVCGDETSLINSIE 174 Query: 192 GRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMG 251 G+R R KPP+P G + KPT VNNVETL I+ G + Y ++ + GTKL+ Sbjct: 175 GKRGTSRIKPPYPTRQGLFNKPTVVNNVETLAAAAEIILQGADKYGSMGTEQSRGTKLVC 234 Query: 252 FSGRVKNPGLWELPFGT-TAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPME 310 SG + NPG++E+ FGT T +E+++ + GG++ K PGG T L + LD+P Sbjct: 235 LSGDICNPGVYEVEFGTMTIKELIDTFGGGVKCSSGLKFVIPGGISTSVLKDDELDIPYT 294 Query: 311 FESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRA 370 +E I K GS LG+ + V + + L+ N+ FF E+CG C PCR+G +L+ Sbjct: 295 YEDIEKKGSSLGSGAVVVVSEDHYLPDLMLNVSRFFMDETCGTCFPCREGNRRVHLLLKN 354 Query: 371 -LERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEF 419 + G + + + + R + C ++ + S + F +E Sbjct: 355 KISDGRFDRDEKKLISDIGRAIHLAA-RCGLGQTSLNFVTSVLNKFEDEL 403 >UniRef50_C9KNE8 Protein HymB n=2 Tax=Veillonellaceae RepID=C9KNE8_9FIRM Length = 416 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 154/410 (37%), Positives = 228/410 (55%), Gaps = 3/410 (0%) Query: 11 HPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTG 70 + + Y + G+E RKA+T + P+EI + + +KGRGGA + G Sbjct: 4 VHFLTKNFGKYDTSSIGSYMNVGGFEALRKAVT-MDPEEITDLLTAVKIKGRGGAEYPLG 62 Query: 71 LKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYI 130 KWS + ++CNADE E T+KDR L+ P L+E M+I+A+ + A G+I Sbjct: 63 RKWSQARAVRGER-KVVICNADEGETTTFKDRELICHDPFNLIEAMIIAAYVVGASDGFI 121 Query: 131 FLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSL 190 ++R EY L AI +A G LG NI+G GFDF++ +++GAG Y+CGE TALI S+ Sbjct: 122 YMRAEYACFRPLLLNAIRQAKNYGFLGTNILGRGFDFDIHLYSGAGAYVCGEGTALIRSI 181 Query: 191 EGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLM 250 EG+ PR KPPF SG + +PTC+NNVETL VP +L + Y + + GTKL+ Sbjct: 182 EGKAGRPRMKPPFIKVSGVFARPTCLNNVETLSLVPHLLLDEEGVYASCGSGESIGTKLV 241 Query: 251 GFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPME 310 +G V +PG++E+PFGTT REIL + AGG++ K + Q GGA ++ LD P Sbjct: 242 SVAGNVNHPGVFEIPFGTTVREILYELAGGIQHDRKIRLIQFGGASGKIADDSILDTPYT 301 Query: 311 FESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRA 370 +E + AG +G+ + +D +++ +R +EFF ESCG CTPCR+G IL Sbjct: 302 YEDLRAAGVMVGSGGMLVIDERTSVLDFLRMNQEFFWEESCGQCTPCREGNLHIKIILDK 361 Query: 371 LERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFE 420 + G DI + ++ R + + C A L SA+K F + F+ Sbjct: 362 MATGTATREDIAIMMKIARVMSM-SSLCGLGETAQNSLLSAMKVFPDLFD 410 >UniRef50_Q9ZBV8 Putative respiratory chain oxidoreductase n=4 Tax=Streptomyces RepID=Q9ZBV8_STRCO Length = 646 Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 180/411 (43%), Positives = 232/411 (56%), Gaps = 12/411 (2%) Query: 8 PETHPLTWRLRDDK---QPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGG 64 P+ T L P LD+YR+ GY R+A L P ++ +V DAGL GRGG Sbjct: 237 PQAGDPTLTLLHRIGTTDPTSLDDYRAHGGYTALRRAFA-LGPAAVIREVTDAGLVGRGG 295 Query: 65 AGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALK 124 A F TG KW + + YL+CNADE EPGT+KDR+LME P+ LVE M I+A+A Sbjct: 296 AAFPTGRKWQAT-AAQPDHPHYLVCNADESEPGTFKDRVLMEGDPYALVEAMTIAAYATG 354 Query: 125 AYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEET 184 A+RGY++LRGEY A L AI +A GLLG +++G G+ F++ + GAG YICGEET Sbjct: 355 AHRGYLYLRGEYPRALARLTHAIEQARTRGLLGDDVLGQGYAFDIEIRRGAGAYICGEET 414 Query: 185 ALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKD 244 AL NS+EGRR PRSKPPFP G +GKPT NNVETL NV IL G E Y I Sbjct: 415 ALFNSIEGRRGEPRSKPPFPVEKGLFGKPTVENNVETLVNVLPILTMGAEAYAAIGTPTS 474 Query: 245 AGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAH 304 G KL SG V PG++ELPFG T E+L G+RD +A GGA F+ Sbjct: 475 TGPKLFCVSGTVARPGVYELPFGATLGELLALA--GVRD--NLRAVLLGGAAGGFVRPDE 530 Query: 305 LDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWS 364 LD+P+ FE +AG+ LG+ + MA D + + L+ + EFF ESCG C PCR G Sbjct: 531 LDIPLTFEGTREAGTTLGSGVVMAFDDTVPLPRLLLRIAEFFRDESCGQCVPCRVGTVRQ 590 Query: 365 VKILRALER--GEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIK 413 + L + G DI L ++ R + + C A ++SAI Sbjct: 591 EEALHRIADRTGAAAADDIALLREVGRAMRDA-SICGLGQTAWNAVESAID 640 >UniRef50_A3EW61 NADH dehydrogenase (Quinone) n=3 Tax=Bacteria RepID=A3EW61_9BACT Length = 453 Score = 424 bits (1089), Expect = e-117, Method: Composition-based stats. Identities = 136/406 (33%), Positives = 221/406 (54%), Gaps = 3/406 (0%) Query: 26 LDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIR 85 L Y GYEG R+ L LSP E + ++K+AGL+GRGG+GF T +KW + + + Sbjct: 32 LSTYLKDGGYEGLRRVLGNLSPSEAIEELKEAGLRGRGGSGFPTAIKWEKV-AHHRIREK 90 Query: 86 YLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRR 145 Y++ N E EPG++KD L+E PH ++EGM+I++FA++A + +F++ + L++ Sbjct: 91 YVVANGSEGEPGSHKDHFLIETNPHQILEGMIIASFAVRARKAILFVKDSFPRGIDALKK 150 Query: 146 AIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGR-RANPRSKPPFP 204 A EA E G LG I+G+ +L + G YI GEETAL+ +LEGR P +P Sbjct: 151 ARDEAREEGFLGDRILGSELSLDLEIFVGPSAYIAGEETALLEALEGRLPKPRPKPPGYP 210 Query: 205 ATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWEL 264 G + PT VNNVET +V I +G W++ K GT + +G VK P + EL Sbjct: 211 TDRGLYNCPTVVNNVETYAHVSHIFRHGAHWFKRRGLPKSPGTMVFSVTGSVKRPIVVEL 270 Query: 265 PFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTA 324 P GT+ R ++E+YAGG DG + +++ PGG L LD P++++++ GS +G+ Sbjct: 271 PLGTSLRTLVEEYAGGAPDGERIESFYPGGPSFGVLPAKDLDTPLDYDALRALGSGIGSG 330 Query: 325 LAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETL 384 + + + V+ R F+ SCG C PCR G +IL E G+ +++ + Sbjct: 331 GVIVLSDKDCPVATARQFAAFYETGSCGQCPPCRIGTENLHEILELFENGKASRENVQRI 390 Query: 385 EQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNT 430 ++ + G+ C + ++S +++F EEF++ + Sbjct: 391 LRISDMI-KGRGNCGLITASAYSVESLVRHFPEEFQSHLDDGGCRR 435 >UniRef50_Q1QYV5 NADH dehydrogenase (Quinone) n=66 Tax=Proteobacteria RepID=Q1QYV5_CHRSD Length = 595 Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 152/424 (35%), Positives = 231/424 (54%), Gaps = 28/424 (6%) Query: 1 MKNIIRTPETHP--LTWRLRDDKQPVWLDEYRSKNGYEGARKALTG-LSPDEIVNQVKDA 57 + ++I T HP + W+ L +YR++ GY G ++ + ++ ++ A Sbjct: 190 VASVIDTGHYHPEAILWQ--------RLADYRAEGGYALLADCHAGRVTVEALMQALETA 241 Query: 58 GLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGML 117 L+G GGAGF T KW+ + ++ RY NADE EPGT+KDR+ +E+ PH +EG L Sbjct: 242 NLRGLGGAGFPTFKKWTFVRQE--AGPRYCAINADEGEPGTFKDRVYLERSPHRFLEGAL 299 Query: 118 ISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGR 177 +SA+A++A YI+LR EY LR AIAE + GL+ + + + GAG Sbjct: 300 VSAWAVEAEALYIYLRDEYPGLHRVLREAIAELEDEGLVVPDY--------IVLRRGAGA 351 Query: 178 YICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQ 237 YICGEE+A+I SLEG+ PR +PPF A G + +PT VNNVET+ +P I G E + Sbjct: 352 YICGEESAMIESLEGKPGKPRHRPPFVAQRGLFDRPTLVNNVETVYWIPLIWQRGAEAFA 411 Query: 238 NISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGT 297 + G + SGRVK+PG+ P G T E++E+Y GGM +G + A+ PGGA Sbjct: 412 RQGRHGRVGLRSFSVSGRVKHPGVHLAPAGITLEELIEEYCGGMAEGHRLVAYLPGGASG 471 Query: 298 DFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPC 357 L + ++P++F+++ G +G+A + + + ++ ++ NL FFA ESCG CTPC Sbjct: 472 GILPASKANVPLDFDTLQAYGCFIGSAAVIVLSDQDDLRAVATNLLAFFADESCGQCTPC 531 Query: 358 RDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFRE 417 R G + +L EG D TL +L + + + C A P+ +K FR Sbjct: 532 RVGTEKMLTLL------EGDEWDAATLTRLSQVMMDA-SICGLGQAAPNPVLGLLKDFRG 584 Query: 418 EFEA 421 E A Sbjct: 585 ELAA 588 >UniRef50_C0X553 NADH dehydrogenase (Quinone) n=24 Tax=Firmicutes RepID=C0X553_ENTFA Length = 432 Score = 422 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 147/408 (36%), Positives = 230/408 (56%), Gaps = 7/408 (1%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 L R+ + + EY +G++G ++A++ LS +EI+N++ A L+GRGGA + G K Sbjct: 9 LLERMGKMQSATDVAEYCKYDGFDGLKRAIS-LSDEEILNELDIAHLRGRGGAAYPLGKK 67 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 W + + +Y++CNADE EPGT+KD++L+ + P ++EGM+I+ + A GYI++ Sbjct: 68 WRHLYHAKGT-TKYIVCNADEGEPGTFKDKVLLSEDPLSVIEGMIIAGYLFSAKAGYIYM 126 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMG-TGFDFELFVHTGAGRYICGEETALINSLE 191 RGEY + A+ A +AG LG+NI+G GF++++ + +GAG YICGE +AL+NS+E Sbjct: 127 RGEYRRIQKTFQEALDNARQAGFLGENILGIEGFNYDITIISGAGAYICGENSALLNSIE 186 Query: 192 GRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMG 251 G+ PR KPP A G + +PT VNNVE+ +VP IL G + + + + GTKL+ Sbjct: 187 GKTGRPRVKPPHLADVGLYLQPTLVNNVESFASVPVILREGGQAFLEMGTADGGGTKLIC 246 Query: 252 FSGRVKNPGLWELPFGTTAREIL--EDYAGGMRDGLKFKAWQPGGAGTDFLTEAHL-DLP 308 SG +KN GL+E+ GT EI+ E Y GG G K GG A L D Sbjct: 247 LSGHIKNRGLYEVNLGTPLEEIIYGEQYGGGSATGRALKFIHFGGQSGPIGAVATLRDCL 306 Query: 309 MEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKIL 368 +E + +G+ + +D +N+V + ++ FFA ESCG CTPCR G +++L Sbjct: 307 YSYEDLWAHDLSVGSGAIVVMDDSVNVVDYLVHVAAFFAHESCGKCTPCRLGTTRILELL 366 Query: 369 RALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFR 416 R E D+ LE++ + + C P++SA+ F Sbjct: 367 SKFNRNEATASDLPRLEKMLTHVTR-LSACGLGQSVANPMKSALALFP 413 >UniRef50_B4Q4H9 GD22602 n=4 Tax=Coelomata RepID=B4Q4H9_DROSI Length = 499 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 155/445 (34%), Positives = 224/445 (50%), Gaps = 55/445 (12%) Query: 20 DKQPVWLDEYRSKN-GYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLM-- 76 + L + Y+ L G D IVN++K +GL+GRGGAGF +G+KWS M Sbjct: 62 GRHDWRLKGALKRGDWYKTKEIVLKG--ADWIVNEIKTSGLRGRGGAGFPSGMKWSFMNK 119 Query: 77 PKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEY 136 P D +L +DR +M PH LVEG LI+ A+ A YI++RGE+ Sbjct: 120 PGDGRPKAWHL------------QDREIMRHDPHKLVEGCLIARRAMGAQAAYIYIRGEF 167 Query: 137 IEAAVNLRRAIAEATEAGLLG-----------------------------------KNIM 161 LR I+ A L K Sbjct: 168 YNEEPALRSEISAHPPAVRLSDADAPWAQLPTLIVRVSTSFQHATGHAEPPSWSDWKKAC 227 Query: 162 GTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVET 221 GTG+DF++F+H GAG YICGEETALI SLEG++ PR KPPFPA G +G PT V NVET Sbjct: 228 GTGYDFDVFMHRGAGAYICGEETALIESLEGKQGKPRLKPPFPADVGVFGCPTTVTNVET 287 Query: 222 LCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGM 281 + P I G W+ + +++++GTKL SG V P E +E++E + GG+ Sbjct: 288 VAVAPTICRRGGVWFASFGRTRNSGTKLFNISGHVNRPCTVEEEMSIPLKELIERHCGGV 347 Query: 282 RDGL-KFKAWQPGGAGTDFLTEAHL-DLPMEFESIGKAGSRLGTALAMAVDHEINMVSLV 339 G PGG+ T + + D+ M+F+ + A + LGTA + +D +++ + Sbjct: 348 TGGWDNLLGVIPGGSSTPIIPKNVCDDVIMDFDGLIAAQTSLGTAAIIVMDKSTDVIKAI 407 Query: 340 RNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCA 399 L F+ ESCG CTPCR+G+ W KI+ +G+ QP +I+ L ++ + + G T CA Sbjct: 408 ARLISFYKHESCGQCTPCREGIGWMNKIMTRFVKGDAQPAEIDMLWEISKQI-EGHTICA 466 Query: 400 HAPGAVEPLQSAIKYFREEFEAGIK 424 GA P+Q I++FR E E ++ Sbjct: 467 LGDGAAWPVQGLIRHFRPEIEKRMQ 491 >UniRef50_Q2SQP5 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit n=3 Tax=Proteobacteria RepID=Q2SQP5_HAHCH Length = 611 Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 157/439 (35%), Positives = 225/439 (51%), Gaps = 18/439 (4%) Query: 7 TPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAG 66 P + PV L + G + A LSP E++ QV+++ L+GRGGAG Sbjct: 172 HPLVQAMVRNNIRQPGPVLLTDANPDQGLQAA----LQLSPLEVIAQVEESLLRGRGGAG 227 Query: 67 FSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAY 126 F TG KW L + RY++CNADE EPGT+KDR+L+ + P LL GM I+A+A+ A Sbjct: 228 FPTGRKWRL-AANTPAEERYVICNADEGEPGTFKDRVLLTEKPDLLFAGMTIAAYAVGAR 286 Query: 127 RGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTG-FDFELFVHTGAGRYICGEETA 185 G ++LRGEY L + E LLG I+G F F++ + GAG YICGEE++ Sbjct: 287 HGILYLRGEYRYLRAYLEATLQRRREQNLLGAGILGRDDFSFDIRIQMGAGAYICGEESS 346 Query: 186 LINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDA 245 LI+S EG+R P+++PPFP SG G PT VNNVETL VP I+ G W++ + + + Sbjct: 347 LISSCEGKRGEPKNRPPFPVQSGYLGHPTVVNNVETLSCVPRIMEQGAPWFRGMGTTGSS 406 Query: 246 GTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHL 305 GTKL+ SG PG++E+ FG T EIL A GGA + Sbjct: 407 GTKLLSVSGDCVRPGIYEIAFGVTLAEILTQAGA-----QDAAAIVVGGASGQIVGRTEF 461 Query: 306 DLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSV 365 + FE + AG+ + + N++ +FF ESCG+CTPCR G + Sbjct: 462 HRRLCFEDLASAGA------IVCFNSSRNILEAAAYYMDFFIEESCGYCTPCRVGNVFLK 515 Query: 366 KILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 K L + GEG+P D++ L L + + C + P+ S ++YF + A +K+ Sbjct: 516 KGLEKIMHGEGEPEDLDYLRSLSDTI-IATSRCGLGHTSPNPILSTMEYFPLVYSAMVKE 574 Query: 426 PFSNTHLINGIQPNLLKER 444 IQ L + R Sbjct: 575 RPGGMQAGFNIQKALDEAR 593 >UniRef50_C4LEV2 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LEV2_TOLAT Length = 570 Score = 416 bits (1070), Expect = e-115, Method: Composition-based stats. Identities = 157/402 (39%), Positives = 223/402 (55%), Gaps = 15/402 (3%) Query: 28 EYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYL 87 Y S + G KA + PDE++ ++ +GL GRGGAGF TG KW M D + +++Y+ Sbjct: 179 TYASHHANAGITKA-AAMEPDEVIAEISASGLCGRGGAGFPTGTKWK-MAADANGDVKYM 236 Query: 88 LCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAI 147 +CNADE EPGT+KDR+ + L+ EGM I+A+A++A +G ++LR EY +L + + Sbjct: 237 ICNADEGEPGTFKDRITLSWFADLVFEGMTIAAYAIRASQGIVYLRAEYAYLLPHLEQVL 296 Query: 148 AEATEAGLLGKNIMG-TGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPAT 206 EAGLLG +I G GF+F++ + GAG Y+CGEETALI SLEG R PR++PP+P Sbjct: 297 KARREAGLLGCDISGKEGFNFDIRIQMGAGSYVCGEETALIESLEGNRGEPRNRPPYPTE 356 Query: 207 SGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPF 266 +G G+PT VNNVETL V ILA G +W+ I K G KL SG PGL+ELP+ Sbjct: 357 AGFLGQPTVVNNVETLATVSVILARGAQWFSGIGTEKSKGFKLFSVSGECARPGLYELPW 416 Query: 267 GTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALA 326 G+T +L + G KA Q GG FL A + +E +G S Sbjct: 417 GSTVSGLLA-----LAGGEGAKAVQIGGYSGRFLPAAEFGRKLAYEDLGAGSS------V 465 Query: 327 MAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQ 386 + + +++ + N EFF ESCG CTPCRDG + +R+L G+ ++ L Sbjct: 466 IIYGPDRDLLEVAENYLEFFVEESCGQCTPCRDGNVVLLNGIRSLRNGKCSGQQLDELLS 525 Query: 387 LCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFS 428 L + + C + + L S +YFR E A + S Sbjct: 526 LAETICVA-SKCGLGQSSPKVLLSINRYFRNEINAHLTAEHS 566 >UniRef50_Q47HE6 NADH dehydrogenase (Ubiquinone), 24 kDa subunit:Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit n=4 Tax=Proteobacteria RepID=Q47HE6_DECAR Length = 632 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 153/384 (39%), Positives = 215/384 (55%), Gaps = 15/384 (3%) Query: 46 SPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKD--ESMNIRYLLCNADEMEPGTYKDRL 103 P ++++K A L+GRGGAGF+TGLKW ++ R ++CNADE EPGT+KDR+ Sbjct: 225 GPGATLDEIKRANLRGRGGAGFTTGLKWEACRNAPLKAGAQRIVVCNADEGEPGTFKDRV 284 Query: 104 LMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGT 163 L+ + P L+ EGM ++A+A+ A RG+++LRGEY +L +A LLGK+I+G Sbjct: 285 LLSRNPDLVFEGMTVAAYAVGATRGFVYLRGEYRYMLDHLNAVLAHRRREKLLGKDILGL 344 Query: 164 -GFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETL 222 G DF++ +H GAG Y+CGEE+ALI SLEG+R PR++PPFP T+G +PT VNNVET Sbjct: 345 PGADFDIEIHVGAGAYVCGEESALIESLEGKRGTPRNRPPFPVTNGYLDQPTIVNNVETF 404 Query: 223 CNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMR 282 I NG +WY I AGTKL+ SG + PG++E PFG + R++LED Sbjct: 405 AAAALIALNGGDWYAAIGTKHSAGTKLLSVSGDCERPGIYEYPFGVSVRQVLEDCGA--- 461 Query: 283 DGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNL 342 +A Q G + E D + FE I AG+ ++ +M + RN Sbjct: 462 --RDTQAVQVSGPSGICIAEQEFDRVIGFEDIPTAGAF------TVFNNTRDMFEVARNY 513 Query: 343 EEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAP 402 FF ESCG+CTPCR G ++ L G G P D +E+L L + C Sbjct: 514 VHFFQHESCGFCTPCRVGTSLLKNLMDKLHNGVGSPYDFAEIEKL-NQLLQSMSHCGLGH 572 Query: 403 GAVEPLQSAIKYFREEFEAGIKQP 426 A P+ I+ FR +E + Q Sbjct: 573 TACNPVLDTIERFRPAYERRMAQK 596 >UniRef50_A8ERL2 NADH-quinone oxidoreductase, F subunit n=2 Tax=Campylobacteraceae RepID=A8ERL2_ARCB4 Length = 416 Score = 409 bits (1052), Expect = e-113, Method: Composition-based stats. Identities = 165/415 (39%), Positives = 239/415 (57%), Gaps = 5/415 (1%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 + + D L+ + Y K L + P+E+ +V +GL+G+GG G + G K Sbjct: 5 IVSKNFDIPNSHKLEVALANGRYSSIDK-LFTMKPEEVTAEVTKSGLRGKGGGGAACGPK 63 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 W LMP + RYL+ N DE EPGT+KDR + + PH+L+EG++ + +A++A YI++ Sbjct: 64 WELMPPVD-ERPRYLIVNGDESEPGTFKDRQIFQYDPHILIEGIICTCWAIQANHAYIYI 122 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGT-GFDFELFVHTGAGRYICGEETALINSLE 191 RGEY L AI EA EA ++G IM F ++ VH G G YICGE++ALI SLE Sbjct: 123 RGEYKFFIDRLNEAIKEAYEAKIIGDKIMDKYDFKVDITVHRGGGAYICGEKSALIESLE 182 Query: 192 GRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMG 251 G+R +PR KP + P VNNVET+ +VP I+ NG E Y K GT L Sbjct: 183 GKRGHPRLKPHGKECEWFFDNPATVNNVETISSVPNIVENGAEGYTKYGTEKSPGTMLFA 242 Query: 252 FSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLP-ME 310 SG VKNPG++E+ +G + L GGM +G K KA PGG+ LT + ++ ++ Sbjct: 243 ISGPVKNPGVYEMAYGNKMIDFLNVLGGGMLEGKKLKAIIPGGSSCPILTASEVEKAVLD 302 Query: 311 FESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRA 370 +ES+ + GS LGT + +D + +MV + +N+ EF+ ESCG CTPCR+G W KIL+ Sbjct: 303 YESMWEIGSTLGTGGMIVIDEDTSMVEVAKNIIEFYHHESCGQCTPCREGTGWIDKILKK 362 Query: 371 LERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 + GE D++T+ +C L GKT C AP + + S +K F EEF+A +K Sbjct: 363 VIAGEASDKDLKTIMDVCDTLN-GKTVCVFAPAVKDIIASIVKKFPEEFKAYLKN 416 >UniRef50_A1WBG0 NADH dehydrogenase (Quinone) n=11 Tax=Proteobacteria RepID=A1WBG0_ACISJ Length = 640 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 136/400 (34%), Positives = 207/400 (51%), Gaps = 18/400 (4%) Query: 24 VWLDEYRSKNGYEGARKALTG-LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESM 82 L YR+ GY+ A + G + + ++ ++D+GL+G GGAGF G KW ++ + Sbjct: 230 ADLVTYRAHGGYQTAAALVNGEMDAEAVLAAMEDSGLRGLGGAGFPAGRKWRIVR--DQP 287 Query: 83 NIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVN 142 R + N DE EPGT+KDR +E+ PH +EG+LI+A + YI+LR EY Sbjct: 288 APRLMAVNIDEGEPGTFKDRTYLERDPHRFLEGVLIAAQVVGTEAVYIYLRDEYHGCRAL 347 Query: 143 LRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPP 202 L+ A+ E + + GAG YICGEE+A+I S+EG+R PR +PP Sbjct: 348 LQSALEELRAESPCPL--------PHIELRRGAGAYICGEESAMIESIEGKRGEPRMRPP 399 Query: 203 FPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLW 262 + A G +G+PT +N ETL V I+ G +W+ + + G + SGRVK PG+ Sbjct: 400 YIAQVGLFGRPTLEHNFETLYWVRDIVEKGPQWFASFGRHGRRGLRSFSVSGRVKEPGVK 459 Query: 263 ELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLG 322 P G T RE++++Y GGM DG A+ PGGA L D+P++F+++ G +G Sbjct: 460 LAPAGITLRELVDEYCGGMADGHVLYAYLPGGASGGILPARLSDVPLDFDTLQPHGCFIG 519 Query: 323 TALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIE 382 +A + + N+ FFA ESCG CTPCR G + +++ + D + Sbjct: 520 SAAVIVLSQHDRARDAALNMMRFFAHESCGQCTPCRVGTAKAAQLM------QAPLWDED 573 Query: 383 TLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAG 422 TL+ L + + + C A P++ KYF E G Sbjct: 574 TLDDLAQVMADA-SICGLGQAAPNPIRCIHKYFAHEVGEG 612 >UniRef50_B6K7D1 NADH-quinone oxidoreductase subunit F n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K7D1_SCHJY Length = 418 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 138/408 (33%), Positives = 219/408 (53%), Gaps = 6/408 (1%) Query: 23 PVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESM 82 + + + Y L + ++N + + L+GRGG+GF TG KW + + Sbjct: 13 ARSIAFAKKQGRYSKLSDILKKKG-EILINTISRSMLRGRGGSGFYTGRKWESVVATAEL 71 Query: 83 ---NIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEA 139 +RYL+ NA E EPG++KDR L+ +PH ++EG ++SA A+ A YI +R EY + Sbjct: 72 LKHPMRYLVVNASEGEPGSFKDRYLLASVPHTVIEGSIMSAKAIGASACYISVRAEYYKE 131 Query: 140 AVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRS 199 A++L+ AI EA E G LGKNI+GT F ++F+H G G YI GEETAL+ SLEG+ A PR Sbjct: 132 ALHLQEAINEAYEEGYLGKNILGTDFSLDIFIHRGEGNYISGEETALLESLEGKAAKPRV 191 Query: 200 KPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNP 259 +PPFP G +G T VNNVET+ N+P IL NG EW++++ + GTKL SG V+ P Sbjct: 192 RPPFPTEHGVFGCATAVNNVETIANIPCILENGDEWFRSLGSPNNYGTKLFCISGDVRQP 251 Query: 260 GLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLD-LPMEFESIGKAG 318 ++E +E++E + G + A PGG + + + M+++ + + G Sbjct: 252 NVYEERLSIPLKELIETHGGVIGGWDSLVAVFPGGPSMGICNKEQCEHMLMDYDYLRQIG 311 Query: 319 SRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQP 378 + LGTA + ++ + + N +F+ +E+C C CR+G ++L + G+ P Sbjct: 312 TGLGTASVIVLNDIDKVFEAILNFSKFYKKETCRKCLACRNGTKIINELLELVREGKATP 371 Query: 379 GDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQP 426 I L Q+ ++ T C + L S K F + + + Sbjct: 372 SVITDLRQVSNYVTKD-TICNFSAAPSLLLNSYFKNFPADIQRRTRAK 418 >UniRef50_A9BV38 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=188 Tax=cellular organisms RepID=A9BV38_DELAS Length = 727 Score = 404 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 162/419 (38%), Positives = 232/419 (55%), Gaps = 10/419 (2%) Query: 8 PETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGF 67 LT+ P+ L +Y + G++G +A + P IV +V D+GL+GRGGA F Sbjct: 301 ARQERLTFARVGVIDPLNLADYAAHGGWQGLERA-ARMEPAAIVQEVLDSGLRGRGGAAF 359 Query: 68 STGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYR 127 G+KW + + +Y+ CNADE + GT+ DRLLME P+ L+EGM I+ A+ A + Sbjct: 360 PAGIKWKTVAAA-AGPQKYIACNADEGDSGTFADRLLMEGDPYTLIEGMAIAGLAVGATQ 418 Query: 128 GYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALI 187 G +++R EY A LR AIA A AG LG+++ G+G F + V GAG Y+CGEETA++ Sbjct: 419 GLVYVRSEYPHAVATLREAIARAEAAGWLGRDVAGSGRAFHMEVRKGAGSYVCGEETAML 478 Query: 188 NSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGT 247 S+EGRR R+KPP PA G WG+PT +NNV TL VP ILA G +YQ + GT Sbjct: 479 ESIEGRRGIVRAKPPLPAIEGLWGRPTVINNVITLATVPMILARGAAFYQGFGMGRSRGT 538 Query: 248 KLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDL 307 +G + GL E FG + RE++ED+ GG G KA Q GG ++ A D Sbjct: 539 LPFQLAGNIARGGLVEKAFGLSLRELVEDFGGGTATGRTVKAVQVGGPLGSYVAPADWDA 598 Query: 308 PMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKI 367 P+++E+ G+ +G + D +M L R EF A ESCG CTPCR G V++ Sbjct: 599 PLDYEAYAAKGNVVGHGGIVVHDDTADMAQLARYAMEFCAIESCGKCTPCRIGSTRGVEV 658 Query: 368 LRALER-------GEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEF 419 + + R G G + LE LC + G + CA P++SA+ ++ ++F Sbjct: 659 IDRIVRAGADPAAHAGHAGQVALLESLCDTMQHG-SMCAMGGMTPYPVRSALNHYSQDF 716 >UniRef50_B1Y7Y8 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=11 Tax=Proteobacteria RepID=B1Y7Y8_LEPCP Length = 627 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 152/380 (40%), Positives = 210/380 (55%), Gaps = 16/380 (4%) Query: 49 EIVNQVKDAGLKGRGGAGFSTGLKWSL---MPKDESMNIRYLLCNADEMEPGTYKDRLLM 105 ++++VK + L+GRGGAG+ TG KW L P + N Y++CNADE EPGT+KDR+L+ Sbjct: 226 ALLDEVKQSNLRGRGGAGYQTGRKWELCREAPGNTPDNTHYVVCNADEGEPGTFKDRVLL 285 Query: 106 EQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMG-TG 164 + L EGM I+ FA+ A +G+++LRGEY L+ + EA LLG I G G Sbjct: 286 SRYADSLFEGMTIAGFAIGARQGFVYLRGEYRYLLEPLQAVLQRRREANLLGAAIQGREG 345 Query: 165 FDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCN 224 FDF++ +H GAG Y+CGEE+ALI SLEG+R PR +PP+P G +PT VNNVET C Sbjct: 346 FDFDIDIHVGAGAYVCGEESALIESLEGKRGTPRIRPPYPVEHGYLDEPTIVNNVETYCA 405 Query: 225 VPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDG 284 V I +G W+ I K GTK+ SG + PG++E P+GT ILED Sbjct: 406 VTHIAVHGAAWWAGIGTPKSTGTKIHSVSGDCERPGIYEYPYGTRIGRILEDCGA----- 460 Query: 285 LKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEE 344 +A Q GG L+ + FE + AG+ + D +M + RN + Sbjct: 461 RDTQAVQVGGPSGVCLSAFEFGRRIAFEDVPTAGAFM------VFDRSRDMFEVARNFAQ 514 Query: 345 FFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGA 404 FFA ESCG+CTPCR G VK + L G+G D++ L +L + + T C A Sbjct: 515 FFAHESCGFCTPCRVGTALVVKRMDKLAAGQGSRHDVDVLFELDKLMHTA-THCGLGGAA 573 Query: 405 VEPLQSAIKYFREEFEAGIK 424 PL+ I FR +E + Sbjct: 574 CNPLRDTIAKFRPAYEQRLT 593 >UniRef50_B8ERX4 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=1 Tax=Methylocella silvestris BL2 RepID=B8ERX4_METSB Length = 603 Score = 400 bits (1028), Expect = e-110, Method: Composition-based stats. Identities = 139/392 (35%), Positives = 207/392 (52%), Gaps = 14/392 (3%) Query: 34 GYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADE 93 G KA SP++++ ++ ++ L+GRGGAGF TG+KW L K N RY++CNADE Sbjct: 195 GRADGIKAALDQSPEQVIEEISNSKLRGRGGAGFPTGMKWRLTRKAVGEN-RYVICNADE 253 Query: 94 MEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEA 153 EPGT+KDRLL+ + P L+ +GM I+ +AL A RG ++LRGEY L+ + + Sbjct: 254 GEPGTFKDRLLLTEFPDLVFDGMTIAGYALGARRGVVYLRGEYAYLWDPLQEVLRDRRAL 313 Query: 154 GLLGKNIMG-TGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGK 212 GLLG +I G +GFDF++ + GAG Y+CGEE+AL+ S+EG+R PR +PPFP G + Sbjct: 314 GLLGADICGRSGFDFDIRIQLGAGAYMCGEESALLESMEGKRGAPRDRPPFPTERGYLRQ 373 Query: 213 PTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTARE 272 PT ++NVET I+ G W+ + GTKLM SG + PG++E+PFG T E Sbjct: 374 PTAIDNVETFACAARIVEKGAAWFTGFGTKESTGTKLMSVSGDCQRPGVYEVPFGITVNE 433 Query: 273 ILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHE 332 +L+ + Q G + + +E + GS + Sbjct: 434 LLDLVGAPDAEY-----VQISGPSGQSVAPKDFGRRIAYEDLSTGGSTM------IFGPN 482 Query: 333 INMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLG 392 +++ +V +FF ESCGWC PCR G P + + + G DI E L + Sbjct: 483 RDVLDIVLQFADFFVHESCGWCAPCRVGAPLLKQGMEKIVAGRATLADIAATEALANTVM 542 Query: 393 PGKTFCAHAPGAVEPLQSAIKYFREEFEAGIK 424 + C A P+ + + F E +EA + Sbjct: 543 R-MSRCGLGQTAPNPILTTMLSFPELYEARLA 573 >UniRef50_A1Z9Z7 CG8102, isoform A n=7 Tax=melanogaster subgroup RepID=A1Z9Z7_DROME Length = 481 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 137/419 (32%), Positives = 215/419 (51%), Gaps = 13/419 (3%) Query: 19 DDKQPVWLDEYRSKN---------GYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFST 69 DD V+ + Y + G L P+ I+ QV +GL+GRGGAGF Sbjct: 59 DDCDRVFQNLYGRHDWRLHGACQRGDWHRTAELLEQGPEWIMKQVSKSGLRGRGGAGFYA 118 Query: 70 GLKWSLMPKDESMN-IRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRG 128 GLKW + + +S + ++ N E EPGT KDR ++ PH L+EG+L+ A+ R Sbjct: 119 GLKWEFLRQTKSEKVPKMVIVNCAEGEPGTCKDRDILRHEPHKLIEGILLVGVAMGCGRA 178 Query: 129 YIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALIN 188 +++R + A NL A+AEA GLLG ++ GTG F++ V G RY+CGEETA+IN Sbjct: 179 IVYIRNRFYNEACNLHFALAEAYHHGLLGNSVCGTGIKFDVMVQRG-DRYLCGEETAMIN 237 Query: 189 SLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTK 248 L G+ PR +PPF G + P V N E++ VP IL G +W+ + +S + GTK Sbjct: 238 CLMGKLGRPRRRPPFLTEKGYFEHPCLVINAESIAVVPTILRRGSQWWAGLGRSYNTGTK 297 Query: 249 LMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGL-KFKAWQPGGAGTDFLTEAHL-D 306 L SG+V NP E ++++E +AGG++ G A PGG T L + Sbjct: 298 LYCLSGQVNNPCTVEEEMSIPLKDLIERHAGGVKGGWDNLAAVFPGGLSTPLLDPSTAGK 357 Query: 307 LPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVK 366 + M+F+S+ AGS G + + + + ++++ +FF + +C C+ CRDG W + Sbjct: 358 VLMDFDSLTDAGSGFGCGAVIVMTKDCDPLAIMLRSIQFFEKHTCKQCSYCRDGAIWLPE 417 Query: 367 ILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 I +G+ P +I+ + + K CA A V +S ++ F + E + + Sbjct: 418 IFARFVKGQTHPHEIDWTLVIADKMRNSKPICALAYSQVSVAESLVRMFSRKIEERLLK 476 >UniRef50_A1SU84 Hydrogenase, NADP-reducing subunit C n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SU84_PSYIN Length = 588 Score = 396 bits (1018), Expect = e-109, Method: Composition-based stats. Identities = 136/390 (34%), Positives = 204/390 (52%), Gaps = 14/390 (3%) Query: 36 EGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEME 95 E +KAL +P + + ++ +GL+G GGAGF T KW + N RY++CNADE E Sbjct: 187 EAIKKALAT-APHDSLAEIDKSGLRGCGGAGFKTAEKWKSCLLSDD-NQRYVVCNADEGE 244 Query: 96 PGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGL 155 PGT+KDR+L+ LL+EGM + A+ + A +G+I+LR EY L + A L Sbjct: 245 PGTFKDRVLLNSYADLLIEGMTLCAYVIGAQKGFIYLRYEYQHLYKKLLETLQRRRAANL 304 Query: 156 LGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTC 215 LG +I+ + F++ + GAG Y+CGEE+AL+ SLEGRRA PR +PPFP T G KPT Sbjct: 305 LGAHILNSELSFDIEIFMGAGSYVCGEESALLESLEGRRAIPRIRPPFPVTHGYLDKPTV 364 Query: 216 VNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILE 275 VNNVET C I+ G E + + G K++ SG V+ G++E+P G + +L Sbjct: 365 VNNVETFCYAALIIEKGAENFSAQGLAGFTGCKILSISGDVEKTGIYEIPLGLPVKNVLN 424 Query: 276 DYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINM 335 +A Q GG +T A + F+ + GS + + ++ Sbjct: 425 LCGA-----QSVQAVQVGGPSGTLITPAEFSRVISFDDLHTGGSFM------VFNQSRDI 473 Query: 336 VSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGK 395 + N FF +ESCG+CTPCR G + + G+G D+++++QL + G Sbjct: 474 LENALNFTHFFMQESCGFCTPCRVGTKLIYDLADKVATGQGARLDLDSIKQLNHVMN-GM 532 Query: 396 TFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 + C A EPL ++ F E F + Sbjct: 533 SHCGLGQRAAEPLLETLEKFPEYFVKRMTD 562 >UniRef50_A7IMB3 NADH dehydrogenase (Quinone) n=15 Tax=Proteobacteria RepID=A7IMB3_XANP2 Length = 422 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 156/374 (41%), Positives = 212/374 (56%), Gaps = 2/374 (0%) Query: 47 PDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLME 106 PD I+ +KDA L+G GGAGF T KWS + +Y++CN +E EPGT+KDR L+ Sbjct: 44 PDAIIETLKDADLRGMGGAGFPTWRKWS-AAAASPCDEKYVVCNGNEDEPGTFKDRHLLR 102 Query: 107 QLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFD 166 PH ++EG LI+A A+KA R ++ E +R A+ E T + LL G Sbjct: 103 WTPHQVIEGALIAAVAVKANRVVFYVNPHQAEGIDQMRWAVDEWTASDLLASVSKVVGRP 162 Query: 167 FELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVP 226 L V +GRYI GEETA+++ L+G PR KPPFP SG G PT +NN ETL NVP Sbjct: 163 VTLTVAPSSGRYIGGEETAIVSWLDGGFPFPRRKPPFPFESGVGGLPTLINNTETLANVP 222 Query: 227 AILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLK 286 IL NG +WY+++ AGTKL SG V NPGL+ELP GT+ E++ + GGM DG Sbjct: 223 HILKNGADWYRDLGVGAAAGTKLFSLSGDVLNPGLYELPMGTSLEELVFVHGGGMLDGRA 282 Query: 287 FKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFF 346 FKA GG LT LD+ ++F+S+ + SRLGT + + ++V V FF Sbjct: 283 FKAVFTGGPSNTLLTARDLDVALDFDSVKRRKSRLGTGAMIVISEGTSIVRKVAEYVAFF 342 Query: 347 ARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVE 406 A SCG C C+ G ++L + G G D + L+ LCR + PG CA GAV Sbjct: 343 ASGSCGQCPSCKCGTFQMARLLDRIATGRGVEADRQALDHLCR-ILPGSGRCALIDGAVT 401 Query: 407 PLQSAIKYFREEFE 420 ++S+ F +E+E Sbjct: 402 VVESSRHTFPDEYE 415 >UniRef50_C6I0C0 NADH dehydrogenase (Quinone) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I0C0_9BACT Length = 475 Score = 393 bits (1010), Expect = e-108, Method: Composition-based stats. Identities = 149/419 (35%), Positives = 233/419 (55%), Gaps = 11/419 (2%) Query: 21 KQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDE 80 P L Y GY+G R+ L+GLSP +++ ++K++GL+GRGG+GF T LKW + + Sbjct: 42 GDP-SLASYERGGGYKGLRRVLSGLSPSDVIAEIKESGLRGRGGSGFPTALKWEKV-ANH 99 Query: 81 SMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAA 140 + +RY++ N E EPG++KD L+ + PH ++EGM+I+ FA+ A G++F++ + E Sbjct: 100 RVPVRYVVANGSEGEPGSHKDHYLISRSPHQILEGMIIACFAVSAKSGHLFVKESFPEGI 159 Query: 141 VNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSK 200 LR+A EA AGLLG NI+G+GF ++ + G YI GEETAL+ +LEGR PR K Sbjct: 160 NILRKAREEALAAGLLGNNILGSGFSVDIEIFVGPAAYIAGEETALLEALEGRVPRPRPK 219 Query: 201 PPFP-ATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNP 259 PPF G + KPT VNNVET +V ILA G ++ K GT + SG V+ P Sbjct: 220 PPFYPTEMGLYNKPTVVNNVETYAHVSRILAEGTVKFRERGTPKSPGTMIFSVSGSVRRP 279 Query: 260 GLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGS 319 + ELP G + +L DYAGG G F+ + GG L +D P+E++++ G+ Sbjct: 280 VVVELPLGFSLERLLYDYAGGPLPGETFQCFFTGGPSFGILPAREIDTPLEYDALRAKGT 339 Query: 320 RLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPG 379 LG+A + + + ++++ EF+ + SCG C PCR G + L L G+ Sbjct: 340 GLGSAGIIVLGSKDSILATTAAFSEFYEKGSCGQCPPCRLGTESLHQTLEGLMNGQNSED 399 Query: 380 DIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYF----REEFEAG---IKQPFSNTH 431 IE L ++ + + G+ C + ++S +++F REE + + + H Sbjct: 400 GIERLLKVTKMI-KGRGNCGLITASAFMVESLLEHFTPLLREELASRGTEVSRRIPTWH 457 >UniRef50_Q1V283 NAD-dependent formate dehydrogenase beta subunit n=3 Tax=Candidatus Pelagibacter RepID=Q1V283_PELUB Length = 552 Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 150/411 (36%), Positives = 222/411 (54%), Gaps = 13/411 (3%) Query: 9 ETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFS 68 +++ T L DDK LD+++ + K EI + D+ L GRGGAGF Sbjct: 145 KSYASTSFLMDDKLS-NLDQFKEQ------LKKFIATDKQEITKSLLDSNLTGRGGAGFP 197 Query: 69 TGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRG 128 TG+KW K S +Y++CNADE + G + DR L+E P ++ GM+I + + + G Sbjct: 198 TGMKWDFCRKAPSEK-KYVICNADEGDSGAFSDRYLLEDQPLKVLFGMVICGYVIGSDEG 256 Query: 129 YIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALIN 188 +++RGEY ++ + AI +AGLLG+NI+GT F F+L + G G YICGEETALI Sbjct: 257 VLYIRGEYPKSIEAINGAINSLKKAGLLGENILGTKFSFDLNICIGQGAYICGEETALIA 316 Query: 189 SLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTK 248 S+EGRRA +PPFP T G + KPT VNNVETL IL NG + + I K AGTK Sbjct: 317 SIEGRRAEVDVRPPFPVTEGLYKKPTVVNNVETLAAATGILINGADKFSAIGNKKSAGTK 376 Query: 249 LMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLD-L 307 L+ F NPG++E+ GT +++L D GG ++ KA Q GG + ++ L Sbjct: 377 LVCFDSFFNNPGVYEVEMGTPMKKVLNDIGGGFKEP--IKALQIGGPLGGVIPITEIEKL 434 Query: 308 PMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKI 367 ++F+ AG LG A +++ + M+ + +L EF A ESCG C P R G ++ Sbjct: 435 NLDFQEFTAAGFMLGHASIVSIPKDFPMIEYIHHLFEFSAEESCGKCFPGRLGSYRGKEM 494 Query: 368 LRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREE 418 + + ++ L +L + G CA P+ + +KYF +E Sbjct: 495 FDQAKNKTAKI-PLKLLNELLVTMQKG-CLCALCGAIPTPIMNILKYFGDE 543 >UniRef50_A2DV30 Respiratory-chain NADH dehydrogenase 51 Kd subunit family protein n=1 Tax=Trichomonas vaginalis RepID=A2DV30_TRIVA Length = 425 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 126/376 (33%), Positives = 208/376 (55%), Gaps = 6/376 (1%) Query: 50 IVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLP 109 I+++V+ + L+GR GAG T KW + + + YL N +E EPGT KDR +++ P Sbjct: 52 ILDEVRKSELRGRSGAGLLTYKKWEEILTSKQLP-HYLCINGNESEPGTCKDRQILQNEP 110 Query: 110 HLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFEL 169 ++EG ++++AL +R Y+++RG Y + A L+ AI EA +A L+GKN G+DFE+ Sbjct: 111 QKIIEGAFLASYALDVHRCYVYVRGHYTKEAKRLQLAIDEAKKANLIGKNNKF-GWDFEI 169 Query: 170 FVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAIL 229 VH GAG Y+CGE+T L+ SLEG PR KPP P G + PT V+NVET+ + +I Sbjct: 170 NVHPGAGAYVCGEQTGLMTSLEGNPGTPRQKPPQPFEKGLFQCPTVVDNVETISTISSIC 229 Query: 230 ANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGL-KFK 288 G +W+ ++ G K+ SG V P + E G + +E+++ + G+R G + Sbjct: 230 RRGGKWFSSLGIPGSRGPKIYQISGHVNRPCIVEETLGMSLKELIDVHGSGVRGGWDNLQ 289 Query: 289 AWQPGGAGTDFLTEAHL-DLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFA 347 PGG +T+ + + F+ + K GS LGT + +D+ ++V + R + F+ Sbjct: 290 CIIPGGTSCPPITKEQAKNAILGFDEMSKIGSGLGTGSLVVIDNTADIVEVYRRIANFYK 349 Query: 348 RESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEP 407 E CG C C +G +I + RG+G D++ LE++ + K C+ + GA +P Sbjct: 350 DECCGQCKQCVEGTETMAEIFDKIARGKGTKDDVKHLEEVAFGMK--KYICSFSVGASDP 407 Query: 408 LQSAIKYFREEFEAGI 423 ++ +K F+ + Sbjct: 408 IRGFLKVFKNKLLERC 423 >UniRef50_B9MEW2 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=2 Tax=Comamonadaceae RepID=B9MEW2_DIAST Length = 661 Score = 387 bits (993), Expect = e-106, Method: Composition-based stats. Identities = 143/446 (32%), Positives = 214/446 (47%), Gaps = 50/446 (11%) Query: 4 IIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDE-IVNQVKDAGLKGR 62 I R PE W V L YR++ GY A G P + ++ ++D+GL+G Sbjct: 211 ITRGPEAVAPPW--------VGLAAYRARGGYALAAGLAQGHVPADGVLAAMEDSGLRGL 262 Query: 63 GGAGFSTGLKWSLMP--------------------------KDESMNIRYLLCNADEMEP 96 GGAGF G KW ++ E ++ + N DE EP Sbjct: 263 GGAGFPAGRKWRIVREQAALAGRQAAPSEAAAPSAGSGPREAGERGSVALMAVNIDEGEP 322 Query: 97 GTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLL 156 GT+KDR +E+ PH +EG+L++A + YI+LR EY L+ AIAE Sbjct: 323 GTFKDRTYLERDPHRFLEGVLVAAQVVGTAEVYIYLRDEYHGCRALLQAAIAELQADPPC 382 Query: 157 GKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCV 216 + + GAG YICGEE+A+I S+EG+R PR +PP+ A G +G+PT Sbjct: 383 AL--------PRIELRRGAGAYICGEESAMIESIEGKRGEPRMRPPYIAQVGLFGRPTLE 434 Query: 217 NNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILED 276 +N ETL V I+ G +W+ + + G + SGRVK PG+ P G T RE++++ Sbjct: 435 HNFETLYWVRDIVEKGPQWFASFGRHGRRGLRSFSVSGRVKEPGVKLAPAGITLRELVDE 494 Query: 277 YAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMV 336 Y GGM +G A+ PGGA L D+P++F+++ G +G+A + + Sbjct: 495 YCGGMAEGHVLYAYLPGGASGGILPARLADVPLDFDTLQPHGCFIGSAAVIVLSQHDRAR 554 Query: 337 SLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKT 396 N+ FFA ESCG CTPCR G + +++ + D +TL+ L + + + Sbjct: 555 DAALNMMRFFAHESCGQCTPCRVGTAKAAQLM------QAPLWDEDTLDDLAQVMADA-S 607 Query: 397 FCAHAPGAVEPLQSAIKYFREEFEAG 422 C A P++ KYF E G Sbjct: 608 ICGLGQAAPNPIRCIHKYFAHEVGEG 633 >UniRef50_B1CAU2 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CAU2_9FIRM Length = 416 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 139/402 (34%), Positives = 227/402 (56%), Gaps = 4/402 (0%) Query: 25 WLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNI 84 +DEY + G++G +K++ ++ V V D+GL+GRGGA + TG K + + + Sbjct: 18 NIDEYIKRGGFKGLKKSILQ-GYEKTVKDVSDSGLQGRGGANYPTGRKLTQAREAKGNGD 76 Query: 85 RYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLR 144 RY+LCNADE EPGT+KD+ L++ + ++EG++ISAF A +GYI++R EY ++ Sbjct: 77 RYILCNADEGEPGTFKDKYLLQNGIYKVIEGIIISAFCAGANKGYIYVREEYTFMHKDIE 136 Query: 145 RAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFP 204 AI + + G LG++I+ +GFDF+L + +G G Y+CGE A+ S+EG+ PRSKPP+ Sbjct: 137 FAIKQVYDKGFLGEDILSSGFDFDLSLFSGGGSYVCGEGFAMCESIEGKSGRPRSKPPYV 196 Query: 205 ATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWEL 264 G KPT V NVET+ + ++ NG + GTK++ SG+VK+PG++E+ Sbjct: 197 KECGLHNKPTLVINVETVSVIATMMQNGFKTVLKYGVEDCPGTKMVCVSGKVKHPGVYEV 256 Query: 265 PFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTA 324 FGTT + I AGG++ G K K Q GGA + L++P + + K +G+ Sbjct: 257 EFGTTVQNI-IKIAGGIKGGKKAKFVQIGGASGVIVPYEKLNIPYTYSGMKKVKGNIGSG 315 Query: 325 LAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETL 384 + D + +++ + +E+FF E CG C PCR+G KI+ + +G D++ Sbjct: 316 AIVVADEDDSVIDYLSVVEDFFFHECCGKCVPCREGNRQLKKIMDRFKIKQGTLTDLKNY 375 Query: 385 EQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQP 426 ++ L + C + P SA F +EF+ +K+ Sbjct: 376 VRIVNAL--DASLCGSGKAQIIPFISAYTNFSQEFKNALKRE 415 >UniRef50_D2PS76 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PS76_9ACTO Length = 565 Score = 385 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 157/408 (38%), Positives = 227/408 (55%), Gaps = 16/408 (3%) Query: 19 DDKQPVWLDEYRSKNG------------YEGARKALTG-LSPDEIVNQVKDAGLKGRGGA 65 D+ + Y G Y R L+G LS DE++ ++DAGL+G GGA Sbjct: 145 GDRDLGAVAAYVPDGGWPNDPYASGEHHYRSLRALLSGQLSADEVITALQDAGLRGMGGA 204 Query: 66 GFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKA 125 GF TG KW L+ E ++Y +CNADE EPGT+KDR L+ + PHL++EG+L+ A Sbjct: 205 GFPTGKKWELVRAAEGA-VKYAICNADESEPGTFKDRQLLAEQPHLVLEGLLMGMLVTGA 263 Query: 126 YRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETA 185 G++F+R EY L I E GL+G +++GTG L + T G YI GEETA Sbjct: 264 EEGWVFIRHEYGPEEAVLHSEIGRLREQGLIGPDVLGTGRRLMLDIFTSPGGYILGEETA 323 Query: 186 LINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDA 245 L+ +EG R PR+KPPFP G WGKPT +N+VET +VPAI+A G +W+ + Sbjct: 324 LLECMEGHRGEPRNKPPFPGNYGLWGKPTLMNSVETFADVPAIVARGADWWNAQGVNGAT 383 Query: 246 GTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHL 305 G K SG V+ PG++ +P GTT R+++ D AGG+ G + +A QPGGA ++FL HL Sbjct: 384 GLKFFAVSGHVERPGVYCVPMGTTIRDLI-DVAGGVAGGAELEAVQPGGASSNFLGPEHL 442 Query: 306 DLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSV 365 D+P++F ++ +AGS LG+ + + + ++ N+ FF ESCG C PCR G + Sbjct: 443 DVPLDFGTLAEAGSMLGSGAMVVMAAGTDALAAATNVLRFFRNESCGKCVPCRVGSTKAH 502 Query: 366 KILRALERGEGQPGDIETLEQLCRFLGPGK-TFCAHAPGAVEPLQSAI 412 +L R G+ + L L K + C A+ P+ S + Sbjct: 503 DLLTDTLRSGGELDEARKARLLELELVLRKSSICGLGQVALGPVVSVL 550 >UniRef50_D0IAF4 NAD-reducing hydrogenase hoxS subunit alpha n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0IAF4_VIBHO Length = 609 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 136/398 (34%), Positives = 213/398 (53%), Gaps = 19/398 (4%) Query: 36 EGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEME 95 E + L P E+++ + L+GRGGAGFS GLKW L D + + +Y++CNADE E Sbjct: 194 ERVIRDAVTLVPMEVIDATSTSKLRGRGGAGFSAGLKWRL-CHDAAGDTKYVICNADEGE 252 Query: 96 PGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGL 155 PGT+KDR+++ + P + GM+I+ +A+ A G ++LR EY L + + E L Sbjct: 253 PGTFKDRVILTESPEQVFAGMIIAGYAIGAREGILYLRYEYRYLVDYLEKTLNSLRERNL 312 Query: 156 LGKNIMGTG-FDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPT 214 LG I G F F++ + GAG YICG+E+ALI S EG+R PR KPPFP G G PT Sbjct: 313 LGAKIGGNDKFSFDIRIQLGAGAYICGDESALIESCEGKRGTPRVKPPFPVHQGFMGCPT 372 Query: 215 CVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREIL 274 VNNVETL NV I G WY+++ ++ AGT+L+ SG V+ PG++E+ +G + +++L Sbjct: 373 AVNNVETLANVARIFEKGARWYESMGTAESAGTRLISVSGDVEKPGIYEIEWGISLKDVL 432 Query: 275 EDYAGGMRDGLKFKAWQPGGAGTDFLTEA-HLDLPMEFESIGKAGSRLGTALAMAVDHEI 333 E + + Q G + ++ A + ++ + GS + +E Sbjct: 433 E-----LVGARNPRVAQISGPSGECVSAAKDGNRVFSYKDLSCNGSLM------VFSYER 481 Query: 334 NMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGP 393 N++ +VR FF ESCG CTPCR G + + G D++ + + + Sbjct: 482 NLLEIVRRFIHFFMEESCGICTPCRAGNVELYNKVSLIIEGRAVEQDLDEIVEWANII-R 540 Query: 394 GKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTH 431 G + C + +P+ ++++ F EE+ KQ H Sbjct: 541 GSSRCGLGTTSPKPIITSMQAFPEEY----KQKLVTQH 574 >UniRef50_A6GJI0 Putative NADH dehydrogenase I chain F n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GJI0_9DELT Length = 503 Score = 383 bits (984), Expect = e-105, Method: Composition-based stats. Identities = 153/412 (37%), Positives = 226/412 (54%), Gaps = 19/412 (4%) Query: 10 THPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFST 69 + + + +D + A PD I+ Q+K +GL+GRGGAGF Sbjct: 108 PGAPSGGITPSHDALAIDLAGEDDPSYAAFDKARDEGPDWIIEQLKTSGLQGRGGAGFPA 167 Query: 70 GLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGY 129 +KW + + ++ RY++ NADE EPGT+KDR +M + PH ++EGM I+A+ A + + Sbjct: 168 HIKWHAV-RTQAELTRYVVVNADEGEPGTFKDREIMLRRPHRMIEGMAIAAWVAGAAKAF 226 Query: 130 IFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFD-FELFVHTGAGRYICGEETALIN 188 I++RGE+ + L AIAEA G D ++ + G G YICGEETAL+ Sbjct: 227 IYVRGEFRDCIRALEAAIAEA-----------GERLDWLDIEIVEGHGAYICGEETALLE 275 Query: 189 SLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTK 248 ++EG+R PR KPP+P G WGKPT +NNVETL VP IL+ G EW++ + K++ AG+K Sbjct: 276 AIEGKRGMPRLKPPYPTEKGLWGKPTLMNNVETLACVPEILSRGGEWFKALGKTE-AGSK 334 Query: 249 LMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLP 308 L SG V PG++ELP G + E++E G + KA+ PGGA + FL P Sbjct: 335 LYCISGHVGRPGIYELPLGVSLDELVEAAGGYVGTP---KAFSPGGASSGFLPMDLRGEP 391 Query: 309 MEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKIL 368 ++F + K GS LG+A + ++ ++M R + FF ESCG C PCR G + + Sbjct: 392 LDFGGLAKLGSMLGSAGVVVLNDTVDMAVAARWQQIFFEDESCGQCAPCRIGCRVQRQAI 451 Query: 369 RALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFE 420 P + +E++ + G + C A PLQSA+KYF EEF+ Sbjct: 452 DKFLDARA-PESLGHVEEVAWEMDAG-SICGLGMVASLPLQSAMKYFGEEFD 501 >UniRef50_P22317 NAD-reducing hydrogenase hoxS subunit alpha n=5 Tax=Bacteria RepID=HOXF_RALEH Length = 602 Score = 382 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 133/378 (35%), Positives = 211/378 (55%), Gaps = 15/378 (3%) Query: 45 LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLL 104 L P++++ + D+ L+GRGGAGFSTGLKW L +D +Y++CNADE EPGT+KDR+L Sbjct: 203 LKPEQVIETIVDSRLRGRGGAGFSTGLKWRL-CRDAESEQKYVICNADEGEPGTFKDRVL 261 Query: 105 MEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMG-T 163 + + P + GM+I+A+A+ +G ++LRGEY L R + E E GLLG+ I G Sbjct: 262 LTRAPKKVFVGMVIAAYAIGCRKGIVYLRGEYFYLKDYLERQLQELREDGLLGRAIGGRA 321 Query: 164 GFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLC 223 GFDF++ + GAG YICG+E+ALI S EG+R PR KPPFP G GKPT VNNVET Sbjct: 322 GFDFDIRIQMGAGAYICGDESALIESCEGKRGTPRVKPPFPVQQGYLGKPTSVNNVETFA 381 Query: 224 NVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRD 283 V I+ G +W++ + AGT+L+ +G PG++E+ +G T E+L M Sbjct: 382 AVSRIMEEGADWFRAMGTPDSAGTRLLSVAGDCSKPGIYEVEWGVTLNEVLA-----MVG 436 Query: 284 GLKFKAWQPGGAGTDFLT-EAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNL 342 +A Q G + ++ + + +E + G+ + + +++ +VR+ Sbjct: 437 ARDARAVQISGPSGECVSVAKDGERKLAYEDLSCNGAF------TIFNCKRDLLEIVRDH 490 Query: 343 EEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAP 402 +FF ESCG C PCR G + + + G+ D++ + + + C Sbjct: 491 MQFFVEESCGICVPCRAGNVDLHRKVEWVIAGKACQKDLDDMVSWGALVRR-TSRCGLGA 549 Query: 403 GAVEPLQSAIKYFREEFE 420 + +P+ + ++ F E ++ Sbjct: 550 TSPKPILTTLEKFPEIYQ 567 >UniRef50_O94500 NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial n=1 Tax=Schizosaccharomyces pombe RepID=NDUV1_SCHPO Length = 452 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 128/407 (31%), Positives = 210/407 (51%), Gaps = 8/407 (1%) Query: 20 DKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKD 79 +K+ +D+ + YE + L P I+ V+++ L+GRG GF TG K + K Sbjct: 40 EKRIRRIDDALADGEYENLSEILK-YDPLNIIELVQESELRGRGRYGFPTGEKMLSLYKA 98 Query: 80 -----ESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRG 134 ++ NA E + G++KDRLL+ PH ++EG +I+A A++A Y+F+R Sbjct: 99 TSSERGRKEKPVVIVNAAENDIGSFKDRLLLRHEPHKIIEGAIIAARAVEASACYLFIRK 158 Query: 135 EYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRR 194 +Y E V +++ I +A LLGKN++GT EL +H GAG YI GEE+ALI SL+G Sbjct: 159 DYYEETVMMQKCIIQAYAKKLLGKNLLGTSIGLELLIHPGAGSYITGEESALIQSLQGEF 218 Query: 195 ANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSG 254 P TSG +G PT V NVET+ N+PAI+ G +++ ++ + + GTKL SG Sbjct: 219 PVPDIPINNTITSGLFGLPTLVLNVETVSNLPAIIKKGPKFFISMGRPNNRGTKLFSISG 278 Query: 255 RVKNPGLWELPFGTTAREILEDYAGGMRDGL-KFKAWQPGGAGTDFLTEAHLD-LPMEFE 312 V P + E ++++E+YAGG+R G K PGG + L + + + M+F+ Sbjct: 279 EVNEPNVIEACMSIPLKDLIENYAGGVRGGWNKLVGIFPGGPCSGILNKNQCEQVTMDFD 338 Query: 313 SIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALE 372 S+ S LGT + ++ + + N +F++ +C C CRDG+ ++ L+ L+ Sbjct: 339 SLKALDSSLGTGSVIVLNDHDQIFESLLNFAKFYSTNTCHTCPVCRDGVEDVIETLKGLK 398 Query: 373 RGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEF 419 G ++ + K FC + S + F ++ Sbjct: 399 DGHAHLSQLKDMFSKFNMPSSSKVFCGFGDSMRHQIHSIQRNFPDQI 445 >UniRef50_UPI0000384AE3 COG1894: NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000384AE3 Length = 514 Score = 377 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 139/374 (37%), Positives = 202/374 (54%), Gaps = 23/374 (6%) Query: 44 GLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRL 103 L DE++ +++ AGL+G GGAGF T KW + R ++ NADE EPGT+KDR Sbjct: 161 ELPRDEVLAELERAGLRGMGGAGFPTARKWRAVAA--RPGPRLVVVNADEGEPGTFKDRW 218 Query: 104 LMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGT 163 ++ ++EG LI+A+A++A Y++LR EY A LL I Sbjct: 219 FLQTNAARVLEGALIAAWAVEADEVYLYLRDEY-------------ADLHKLLTVLIRAL 265 Query: 164 GFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLC 223 + + GAG Y+CGEE+ALI SLEG+R PR +PP+ A G +G+PT VNNVETL Sbjct: 266 PGSVPVHLRRGAGAYVCGEESALIESLEGKRGLPRQRPPYVAEVGLFGRPTVVNNVETLY 325 Query: 224 NVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRD 283 V ILA G E + + ++ G + SGRV+ PG+ P G T E++E++ GGM D Sbjct: 326 WVSRILAEGAELFTDEGRNGHRGLRTYSVSGRVRLPGVKIAPNGITITELIEEFCGGMED 385 Query: 284 GLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLE 343 G + +A+ PGGA FL AH+ P+ F +I + G +G+A + E ++ + NL Sbjct: 386 GHQLRAYLPGGASGGFLP-AHVTPPLAFGAIEEHGGFIGSAAVVVFSQEDDLRAHALNLA 444 Query: 344 EFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPG 403 FFA ESCG CTPCR G + +L + D + L L + + + C Sbjct: 445 RFFAHESCGQCTPCRVGTAKAADLLASPR------WDEDLLNDLAQVMRDA-SICGLGQA 497 Query: 404 AVEPLQSAIKYFRE 417 A QS +++F E Sbjct: 498 APNVWQSLLRHFPE 511 >UniRef50_Q293C9 GA20825 n=4 Tax=Drosophila RepID=Q293C9_DROPS Length = 445 Score = 365 bits (936), Expect = 2e-99, Method: Composition-based stats. Identities = 118/357 (33%), Positives = 186/357 (52%), Gaps = 3/357 (0%) Query: 71 LKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYI 130 +W+ + ES + L+ N E EPGT KDR ++ PH ++EG L++ FA+ R I Sbjct: 86 EQWNFLRCAESKQDKVLVMNCAEGEPGTCKDREIIRHEPHKIIEGCLLAGFAMGCNRAII 145 Query: 131 FLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSL 190 ++R + A NL+ A+AEA GLLG + TG F++ V G RY+CGEETAL+ L Sbjct: 146 YVRNRFYNEACNLQFALAEAYRYGLLGPSACDTGIKFDILVQRG-DRYLCGEETALVKCL 204 Query: 191 EGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLM 250 G+ PR +PPF G + P V N E++ +P IL G W+ ++ +S ++GTKL Sbjct: 205 MGKIGRPRRRPPFLTEQGYFSHPCVVINAESIAVLPTILRRGASWWADLGRSYNSGTKLF 264 Query: 251 GFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGL-KFKAWQPGGAGTDFLTEAHL-DLP 308 SG+V +P E R+++E +AGG+R G A PGG T + + ++ Sbjct: 265 NISGQVNSPCTVEEEMSMPMRDLIEKHAGGVRGGWDNLLAIFPGGLSTPLINKQVAGEVL 324 Query: 309 MEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKIL 368 M+FE + AGS G+ + V+ + + + ++ +F+ + +C CT CRDG W ++ Sbjct: 325 MDFECLEAAGSSFGSGALIVVNKQSDPLQVMLRSIQFYEKHTCKQCTYCRDGAIWLPELF 384 Query: 369 RALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 +GE P +I+ + + + C A G V S + FR E I Q Sbjct: 385 DRFVKGEAHPHEIDWTLAIGKKIKDSNPICGLAQGQVNVAVSLVDNFRPYIEDRILQ 441 >UniRef50_D1C1S2 NADH dehydrogenase (Quinone) n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C1S2_SPHTD Length = 442 Score = 363 bits (932), Expect = 8e-99, Method: Composition-based stats. Identities = 132/423 (31%), Positives = 194/423 (45%), Gaps = 20/423 (4%) Query: 6 RTPETHPLTWRLR----DDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKG 61 R HP+ R + L EYR++ GY A SP+E+ N + +GL+G Sbjct: 8 RATLHHPVGETHRLLIPGVTRRESLMEYRAQGGYAPEGWAW---SPEELRNLIAASGLRG 64 Query: 62 RGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAF 121 RGGA F TG KW + + R +L NA E EP + KDR L+ + PHL++EG L++A Sbjct: 65 RGGAAFPTGRKWHGVAAQPA--PRVVLVNAAESEPASAKDRTLLLRRPHLVLEGALLAAR 122 Query: 122 ALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICG 181 A+ A ++L E +L A+ E G+ + + T Y+ G Sbjct: 123 AIDAREIVLYLHATATEVRASLELALRELRADGVQTPHF---------RIVTAPPGYVAG 173 Query: 182 EETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISK 241 E +A + G A P KPP P+ G +PT V NVETL NVP I +G W + + Sbjct: 174 ESSAAVRRANGGPAKPTFKPPRPSERGVGKRPTLVQNVETLGNVPLIARHGANWLREVGA 233 Query: 242 SKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLT 301 GT L+ SG V PG++E+P G R I+E+ GG+ G +A GG +L Sbjct: 234 PNLPGTLLVTLSGAVNRPGVYEVPSGVPLRHIVEELGGGVIGGASIQAMLVGGYFAGWLG 293 Query: 302 EAHLD--LPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRD 359 L+ +E ES+ G LG + V + I ++ L FFA ES C C Sbjct: 294 PDALEQGARLEPESLRAWGVSLGAGAIVVVPNWICGLAQAAWLMRFFADESAQQCGTCLY 353 Query: 360 GLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEF 419 G + L RG P + + L + PG+ C H GA ++A++ F ++ Sbjct: 354 GTRAMADVFARLLRGTASPSERDRLHLWAERMLPGRGACGHLDGAAIAARTALEVFADDI 413 Query: 420 EAG 422 Sbjct: 414 RRH 416 >UniRef50_B2UIT6 NADH dehydrogenase (Quinone) n=6 Tax=Betaproteobacteria RepID=B2UIT6_RALPJ Length = 525 Score = 360 bits (923), Expect = 8e-98, Method: Composition-based stats. Identities = 137/397 (34%), Positives = 201/397 (50%), Gaps = 15/397 (3%) Query: 25 WLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNI 84 L YR KA ++P +VN V + L+GRGGA F G+KW + Sbjct: 141 DLPTYRRGG--AALEKA-RRMAPQALVNMVAASRLRGRGGAAFPAGIKWQAV-ASACAET 196 Query: 85 RYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLR 144 +Y++ NADE +PG + DR L+E+ P L+E I+A A+ A RGYI++R EY +A + Sbjct: 197 KYVVVNADEGDPGAFSDRFLLEEDPFRLIEATAIAAHAVGARRGYIYIRKEYPDAVRVMS 256 Query: 145 RAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFP 204 A+ +A AG LG EL + G G YICGEET+L+N+LEGRR R +PP Sbjct: 257 HALEQARVAGWLGP-------TLELELVVGQGAYICGEETSLLNALEGRRPEVRPRPPQI 309 Query: 205 ATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWEL 264 + G +G PT V+NVETLC +P I+ +G Y + S GTKL+ + + PGL+E+ Sbjct: 310 SECGLFGAPTLVHNVETLCAIPWIVTHGAAAYAALGFSNSRGTKLLSLNSLFRRPGLYEV 369 Query: 265 PFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTA 324 FG + +++E G+R G K GG + LD + +E + +G Sbjct: 370 EFGISLADVVEQLGQGLRRG-KLNGLMVGGPLAGIVPPTLLDTRLGYEEMQTIDCAVGHG 428 Query: 325 LAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETL 384 +A + ++ +V + F ARESCG CTPC G P A P D + Sbjct: 429 GVIAFADDTSIPRIVAQVLRFGARESCGKCTPCHLGTPILAA--MADAAANRLPVDADRF 486 Query: 385 EQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEA 421 +L L + C H G E +QS +++ E +A Sbjct: 487 RRLIDALA-ATSLCGHGRGLAEFVQSVRRHYPSELQA 522 >UniRef50_Q1PZQ6 Similar to NADH dehydrogenase I chain F (1st module) EC: 1.6.5.3 n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZQ6_9BACT Length = 675 Score = 357 bits (915), Expect = 7e-97, Method: Composition-based stats. Identities = 128/411 (31%), Positives = 203/411 (49%), Gaps = 22/411 (5%) Query: 25 WLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNI 84 +EY G KA +SP++IV ++ +GL+GRGGAGF TG+KW + + + Sbjct: 239 SYEEYLCATGENAVHKA-RAMSPEQIVTELLASGLRGRGGAGFPTGVKWRTLVR-HTCPT 296 Query: 85 RYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLR 144 RY++CNA E EPGT+KDR L+ + P+ +EGMLI+A A+ A YI L+ + + +R Sbjct: 297 RYVVCNAAEGEPGTFKDRYLLRKNPYATIEGMLIAAHAVNAAGIYIALKRSFGPSIERVR 356 Query: 145 RAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFP 204 +AI+E GL+ E+ + G Y+ GEE AL+N +EG PR P Sbjct: 357 QAISEMASKGLMD--------GIEIKIVEGPEEYLFGEEKALLNVVEGFPPMPREAYCPP 408 Query: 205 ATSGAWGKPTCVN-----NVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNP 259 G + P N N +TL +VP+I+ +G ++ + +GT + G V+ P Sbjct: 409 YEIGLFATPNSPNPALLDNAQTLAHVPSIVRHGGASFRRLGTHDTSGTLIFTVCGDVQRP 468 Query: 260 GLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGS 319 G++E G T R++ D AGG G +FK G A L D P EF++ GS Sbjct: 469 GVYECEAGITLRKLFYDVAGGPHTGRQFKVALSGVACGVIL-ADRFDTPTEFDAFQMIGS 527 Query: 320 RLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPW----SVKILRALERGE 375 LG+A + +D+ ++ + + + F ESC C C+ GL ++L+ L + Sbjct: 528 GLGSAGFIVLDNAASIPRVTQAVARFLYVESCNQCPACKAGLRTASHGIDELLQHLHLHD 587 Query: 376 GQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQP 426 + G ++ + + P C + + ++ FREEFE K Sbjct: 588 DRAG-LDWIME-GAHSAPQANRCFLPAQGAKLIPGLVQSFREEFEPYAKGK 636 >UniRef50_A0K164 NADH dehydrogenase (Quinone) n=2 Tax=Actinomycetales RepID=A0K164_ARTS2 Length = 566 Score = 343 bits (879), Expect = 9e-93, Method: Composition-based stats. Identities = 146/379 (38%), Positives = 211/379 (55%), Gaps = 13/379 (3%) Query: 40 KALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTY 99 +P++I+ +V+ A L+GRGGAGF KW + R ++ N DE +PG+Y Sbjct: 191 DVAASATPEDILLRVEAAQLRGRGGAGFRAAAKWR--AALDHPAPRVVVANGDEGDPGSY 248 Query: 100 KDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKN 159 DRLLMEQ H ++EG++++ FA+ A G +F+R EY AA LR A+ EA AG LG + Sbjct: 249 ADRLLMEQDAHRVLEGLVLACFAVGATTGIVFVRSEYPLAAARLRNALHEARRAGHLGPD 308 Query: 160 IMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNV 219 I G+GF E+ V GAG Y+ GEETAL+N L G R R +PPFP G G+PT VNNV Sbjct: 309 IAGSGFSLEVRVAEGAGSYVSGEETALLNGLAGLRGVVRPRPPFPTERGFHGRPTVVNNV 368 Query: 220 ETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAG 279 ETLC VP I+ +G Y + S +AGT + S R PG +E+ GT R I+E+ G Sbjct: 369 ETLCAVPWIVQHGGPAYAALGTSDEAGTVIACLSERFLRPGAYEVEIGTPVRRIVEELGG 428 Query: 280 GMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLV 339 G+R G +A Q GG FL LD+P+ ++ + G+ LG A +A D ++ ++ Sbjct: 429 GLRGGATLRAIQIGGPLGGFLGPDDLDVPLSDTALARHGAALGHAGIVAFDDRLSGEQVL 488 Query: 340 RNLEEFFARESCGWCTPCRDGL---PWSVKILRALERGEGQPGDIETLEQLCRFLGPGKT 396 RNL +F A ESCG C+PCR G ++ A + G + + R + G + Sbjct: 489 RNLWDFAAAESCGQCSPCRVGTWRGRALAELPDAPDVGSERG-------DVLRTMAAG-S 540 Query: 397 FCAHAPGAVEPLQSAIKYF 415 CA ++S ++ + Sbjct: 541 LCAFGRRVPAAVRSLVRVY 559 >UniRef50_UPI00016C4299 NADH dehydrogenase (quinone) n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4299 Length = 686 Score = 319 bits (817), Expect = 2e-85, Method: Composition-based stats. Identities = 129/439 (29%), Positives = 201/439 (45%), Gaps = 74/439 (16%) Query: 50 IVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLP 109 ++ ++K A L G GGAG KW L + N +Y++CN DE EPGT+KDR ++ ++P Sbjct: 241 LLWELKTANLLGMGGAGAPAYQKW-LDVWQQPGNEKYIVCNGDESEPGTFKDREILLRMP 299 Query: 110 HLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFEL 169 HL+VEG++++ A G+I++R EY E L+ I A E G G NI G+G +F + Sbjct: 300 HLVVEGVILAGLMTGATSGHIYVRHEYFEQIHALKEEIKRAQELGACGPNIFGSGRNFPV 359 Query: 170 FVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAIL 229 V G YICGE++ALI ++E RR PR++PP + +G KPT VNNVETL P I+ Sbjct: 360 EVFESPGGYICGEQSALIEAMEDRRGQPRNRPPELSANGFRDKPTVVNNVETLAWAPGII 419 Query: 230 ANGVEWYQNIS-------KSKDAGTKLMGFSGRVKNPGLWELPFGTTAREIL--EDYAGG 280 G + Y+ K K G +L SG V PG++E+ G T E+ + Y GG Sbjct: 420 LFGGDKYEMGGWRLATDPKIKFGGRRLFSVSGDVARPGVYEVAIGLTLGELFNGDKYCGG 479 Query: 281 MRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSR-------------------- 320 + +A G L A L + +F++ +A + Sbjct: 480 ITGP--LRAVAASGPSGG-LVPAKLPVDPKFDAKKRADAVARIRDRSAQDADFMEWFLNT 536 Query: 321 ---LGT-------------------------------ALAMAVDHEINMVSLVRNLEEFF 346 LG A +++++ N +F+ Sbjct: 537 HLPLGATELDVLKIPLDLNFFRHLNGALRLPVEAMLGAAITVYAGDVDVLDQAVNYTQFY 596 Query: 347 ARESCGWCTPCRDGLPWSVKI----LRALERGEGQPGDIETLEQLCRFLGPG---KTFCA 399 ESCG C PCR G V+I L++ G D+ +++ + + + C Sbjct: 597 RNESCGKCVPCRLGSQKLVQIGEGLLKSRRAGRLPADDLAAIKKDVKEITKTLQLTSICG 656 Query: 400 HAPGAVEPLQSAIKYFREE 418 A PL +A++YF ++ Sbjct: 657 LGYVAPIPLATALEYFVDD 675 >UniRef50_Q51696 Putative uncharacterized protein ORF2 n=1 Tax=Brevundimonas diminuta RepID=Q51696_BREDI Length = 401 Score = 301 bits (772), Expect = 2e-80, Method: Composition-based stats. Identities = 120/388 (30%), Positives = 180/388 (46%), Gaps = 12/388 (3%) Query: 37 GARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEP 96 A + T + + + Q+ A L G+GGA F + K L + ++ +YL+ N E EP Sbjct: 26 AAYRYATTIDAEAFLAQIDQAQLSGKGGANFPSARKMRLFHQ-QAAPRKYLVVNGGEHEP 84 Query: 97 GTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLL 156 G+ KD L+ P ++EG L A AL A + + +R A A AG L Sbjct: 85 GSAKDDWLLLHHPDTVIEGALCVAHALGATHILVAVNEGRAATVAAVREAAAAIAIAGRL 144 Query: 157 GKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCV 216 + V Y+ GEETAL+ ++ G+ A P +PP+P SG G PT V Sbjct: 145 FPG---------IEVVLVPDEYVVGEETALLQAVAGQVAKPVRRPPYPIESGHQGMPTLV 195 Query: 217 NNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILED 276 +NVETL +VP +L G E Y+ + G L F + G+ +P G +L Sbjct: 196 HNVETLAHVPYLLLLGAEAYRGLGAPGQ-GVTLCTFGEEFVHAGVRLVPVGIDLNSLLYG 254 Query: 277 YAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMV 336 Y GG++ G +A QPGG + FL D+ + S+ AGS LG A A ++V Sbjct: 255 YGGGLKSGQAIRAVQPGGPASGFLPADRFDVAFDSASLRAAGSSLGCAAITAYAASDDLV 314 Query: 337 SLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKT 396 + R FFA SC C CR + I+R LE G+ ++ + + + GK Sbjct: 315 AAARQRAAFFASASCEQCPQCRMQTQMLLAIVRQLESGKANARTLQQIPVIVKA-NAGKA 373 Query: 397 FCAHAPGAVEPLQSAIKYFREEFEAGIK 424 C V P+QS I YF+ + +A ++ Sbjct: 374 ICGLIDMPVAPIQSLIHYFKGDIDARMR 401 >UniRef50_B4K2N7 GH25296 n=4 Tax=Coelomata RepID=B4K2N7_DROGR Length = 833 Score = 298 bits (763), Expect = 3e-79, Method: Composition-based stats. Identities = 117/332 (35%), Positives = 181/332 (54%), Gaps = 14/332 (4%) Query: 15 WRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWS 74 WRL+ Q D YR+ + L + + IV++VK +GL+GRGG+G+ TG KW Sbjct: 142 WRLKGACQRG--DWYRTAD--------LLDMGANWIVDEVKRSGLRGRGGSGYYTGNKWE 191 Query: 75 LMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRG 134 + K + N + L+ N E EPGT KDR ++ PH ++EG L++ +A+ + I++R Sbjct: 192 FLQKVNANN-KILILNCAEGEPGTCKDREILRHEPHKIIEGCLLAGYAMGCEKCIIYVRN 250 Query: 135 EYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRR 194 + A NL+ A+AEA GLLG N TG F++ V G RY+ GEETAL+N L G+ Sbjct: 251 CFYNEACNLQFALAEAYRYGLLGCNACDTGIKFDIQVQRG-DRYLSGEETALVNCLMGKL 309 Query: 195 ANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSG 254 A PR +PP+ G + P V N ETL VP IL G +W+ + ++ + GTKL G Sbjct: 310 ARPRKRPPYLHEQGYFDHPCLVLNTETLAVVPTILRRGAKWFTGLGRNMNFGTKLFSICG 369 Query: 255 RVKNPGLWELPFGTTAREILEDYAGGMRDGL-KFKAWQPGGAGTDFLTEAHLD-LPMEFE 312 V++P E REI++ +AGG+ G PGG + + + + L M+++ Sbjct: 370 HVQHPCTVEEEMSMPLREIIDMHAGGVCGGWNNLLGVFPGGLSSPLIGKVGAEGLLMDYD 429 Query: 313 SIGKAGSRLGTALAMAVDHEINMVSLVRNLEE 344 + KAGS GT + V + + + +++ E Sbjct: 430 CLQKAGSSFGTGGIIVVSNNCDPLLVMQRSIE 461 >UniRef50_B2HFH1 NADH dehydrogenase I (Chain F) (NADH-ubiquinone oxidoreductase chain F), NuoF_1 n=12 Tax=Mycobacterium RepID=B2HFH1_MYCMM Length = 445 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 106/410 (25%), Positives = 184/410 (44%), Gaps = 26/410 (6%) Query: 19 DDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMP- 77 D + + YR++ GY A D+++ ++ +GL GRGGA F +K + Sbjct: 29 DQQDHEDVAAYRAQGGYRPLGDA------DKLLREIDASGLLGRGGAAFPLAVKMRAVRD 82 Query: 78 ---KDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRG 134 + ++ N +E EP ++KDR L+ PHL+++G+ ++A + A R Y+++ Sbjct: 83 NCRRAGPAGGAVVIANGEEGEPASFKDRWLLRNRPHLVLDGLRLAAALVAATRAYVYVSD 142 Query: 135 EYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRR 194 E+A ++ RA+ + G + V Y+ GEETA + ++ G Sbjct: 143 --PESARSVERALTQLDPDAFGG---------VAVSVWAVPPGYVAGEETAAVRAINGGP 191 Query: 195 ANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSG 254 P KPP P G G+PT V+NVETL N+P + +G Y+ + GT L +G Sbjct: 192 VKPSDKPPRPFEYGVSGRPTLVSNVETLANLPYLHRHGASEYRALGTPSSPGTFLATITG 251 Query: 255 RVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESI 314 + P L+ELP+G E+L +A K + GG L L ++ E++ Sbjct: 252 AGRAPVLYELPYGLPFSELLALHA---VAPTKIRGVLMGGYFAGLLNRGVLGTTLDHETM 308 Query: 315 GKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERG 374 + GS LG + + V++ ++ +F RE+ G C C +G + AL Sbjct: 309 RRLGSGLGCGAISVITDD-CPVAVAASVLSYFDRENAGQCGSCFNGTAAMAAVGGALRDF 367 Query: 375 EGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIK 424 DI+ L + + G+ CA A + + F +E + ++ Sbjct: 368 AATSEDIDRLRRWS-VVLRGRGACATLDAATNAAATLLSQFPDEVASHLE 416 >UniRef50_C3JHP2 Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit n=1 Tax=Rhodococcus erythropolis SK121 RepID=C3JHP2_RHOER Length = 403 Score = 287 bits (735), Expect = 5e-76, Method: Composition-based stats. Identities = 113/376 (30%), Positives = 187/376 (49%), Gaps = 20/376 (5%) Query: 48 DEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQ 107 D +++ + +GL GRGGAGFS G+K + + ++ N E EP + KD +L+ Sbjct: 32 DSVISAISRSGLAGRGGAGFSAGVKMAAITGRRP----VVIANGSEGEPLSSKDAVLLSD 87 Query: 108 LPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDF 167 PHL+++G+ I+A A++A ++ + + E LR AI E +G Sbjct: 88 SPHLVLDGLSIAAAAVRATDAFLVVPASHTE---RLRNAITERRHSGW---------DRT 135 Query: 168 ELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPA 227 ++ V AGR++ GE+TALI ++EG+ PRS + SG G+PT V+NVETL +V Sbjct: 136 DVRVVASAGRFVSGEKTALIAAVEGKPPIPRSSLASSSKSGVKGRPTLVHNVETLAHVAT 195 Query: 228 ILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKF 287 I GV+W+++ + + GT L+ SG V NPG+ E+P G+ ++ D G D Sbjct: 196 IARFGVDWFRSSGTTSEPGTMLVTLSGAVNNPGVVEVPIGSRLEWVVGDI--GRADMDNT 253 Query: 288 KAWQPGGAGTDFLTEAHL-DLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFF 346 +A GG ++ A L + ES+ G+R G + A+ + + ++ ++ Sbjct: 254 RAVLVGGYHGTWINRADLAGRRLSRESLAAIGARPGAGVVHALAVDTCGLRATADIVDYL 313 Query: 347 ARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVE 406 ARES G C PC +GLP + L I + + + G+ C H G V Sbjct: 314 ARESAGQCGPCLNGLPRLASVFGDLAYHRPGEQTIHEIRRYAGLV-DGRGACHHPDGTVR 372 Query: 407 PLQSAIKYFREEFEAG 422 ++SA+ F ++ Sbjct: 373 LVRSALTAFADDVRLH 388 >UniRef50_O96948 Hydrogenase (Fragment) n=72 Tax=root RepID=O96948_NYCOV Length = 1206 Score = 287 bits (734), Expect = 6e-76, Method: Composition-based stats. Identities = 110/402 (27%), Positives = 170/402 (42%), Gaps = 32/402 (7%) Query: 36 EGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEME 95 E +KA++ + P++++ +V + L GRGGAGF TG KW K + + +Y++CNADE Sbjct: 830 EATKKAVS-MGPEKVIEEVFKSNLVGRGGAGFRTGKKWESAYKTPASD-KYVVCNADEGL 887 Query: 96 PGTYKDRLLMEQLP--HLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEA 153 P TYKD L+ + GM I A + A R +++LR EY L ++I + Sbjct: 888 PSTYKDWCLLNNEAKRKEVFTGMGICAKTIGAKRCFMYLRYEYRNLVPALEQSIKDVQST 947 Query: 154 GLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPP---FPATSGAW 210 D + + G G Y+ GEE A S+EGR PR P FP G + Sbjct: 948 -------CPELADLKYEIRLGGGPYVAGEENAQFESIEGRAPLPRKDRPGNIFPTMEGLF 1000 Query: 211 GKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPF-GTT 269 KPT +NNVET +P I+ G + + + KL+ +G V P L E + Sbjct: 1001 HKPTVINNVETFFAIPHIIQQGSQSF-----GEGKMPKLLSVTGDVDEPILIETNLNNYS 1055 Query: 270 AREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAV 329 +L++ + A + GG + + D F G+ + Sbjct: 1056 LNHLLQEISA-----KDIVAAEIGGCTEPIIFGSKFDTLFGFG----RGTLNAVGSVVLF 1106 Query: 330 DHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCR 389 + ++ + N +F A ESC C PCRDG + + L R G+ + Sbjct: 1107 NSSCDLGKIYENKLKFMAEESCKQCVPCRDGSYIFHRAFKEL-RDTGKSSYNMRALAVAS 1165 Query: 390 FLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTH 431 + CAH +SA + + I QP S H Sbjct: 1166 ESAARSSICAHGKALESLFKSACDFMNK--TKPIYQPHSTYH 1205 >UniRef50_C1IC09 Respiratory-chain NADH dehydrogenase n=2 Tax=Streptomyces RepID=C1IC09_STRCI Length = 497 Score = 287 bits (734), Expect = 6e-76, Method: Composition-based stats. Identities = 106/414 (25%), Positives = 172/414 (41%), Gaps = 19/414 (4%) Query: 18 RDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMP 77 R +P L ++ E R+ T + +V+ V+ AGL GRGGAGF T K + Sbjct: 85 RATGRPATLGDHLRHR--EALRR--TTDARGSLVDAVEAAGLTGRGGAGFPTARKMRSVA 140 Query: 78 KDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYI 137 + ++ NA E EP + KD+ L+ PHL+++G +++A + A ++ L Sbjct: 141 AGRGRPV--VVVNAMESEPASRKDQFLIAVAPHLVLDGAVLAAVQVGADTVHVCLPRTRT 198 Query: 138 EAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANP 197 L A+ E A L + +H Y+ E T+L+ L+G A P Sbjct: 199 AQQRRLGNAVEERRSARL---------DPVRIRLHALPHGYVSSESTSLVRWLDGGPARP 249 Query: 198 RSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVK 257 R PP G +PT V+N ETL ++ I +G +W++ + GT ++ SG V Sbjct: 250 RGNPPHSHERGVARRPTLVHNAETLAHLALIARHGPDWFRRAGTPDEPGTMMITVSGAVT 309 Query: 258 NPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKA 317 PG+ E+P G L +A GG +L L P+ + Sbjct: 310 APGVGEVPLGIPLDTALGRAGDTTEP---VRALLVGGFAGTWLPAEDLHTPLTRRDLAPL 366 Query: 318 GSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQ 377 G+ G + +A+ + + F +S C PCR GLP + AL G+ Sbjct: 367 GAAPGAGVLIALPRSACGLLETARILAFLGAQSARQCGPCRYGLPAVAEDFAALAAGQSH 426 Query: 378 PGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTH 431 P + L + L P + C H GA SA+ F ++ + + + Sbjct: 427 PELLSRLRRRTGLL-PDRGACRHPDGAARLAASALSAFADDVDRHLARGACPAA 479 >UniRef50_Q67JR5 NADH dehydrogenase subunit n=1 Tax=Symbiobacterium thermophilum RepID=Q67JR5_SYMTH Length = 394 Score = 287 bits (734), Expect = 7e-76, Method: Composition-based stats. Identities = 135/397 (34%), Positives = 195/397 (49%), Gaps = 23/397 (5%) Query: 23 PVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGF--STGLKWSLMPKDE 80 L YR++ GY G A T S ++ QV AGL+GRGG+G G KW + Sbjct: 13 REDLAAYRARGGYAGLEAARTRGS-GWVLEQVTRAGLRGRGGSGDGRPIGQKWQRVAAS- 70 Query: 81 SMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAA 140 + RY++ NA E + + KDR L+ + PH ++EG+LI+A AL A Y+++RG+ EA Sbjct: 71 RVPERYVVANAAESQAVSRKDRYLLARFPHRVLEGLLIAAQALGAREAYLYVRGDSPEAL 130 Query: 141 VNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSK 200 R A+AEA AGLLG + V A + GEETA++++LEG P+ K Sbjct: 131 DGARDAVAEAGAAGLLG--------GVSVTVQPSAPTAVSGEETAILDALEGLEGYPQPK 182 Query: 201 PPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPG 260 PP P G G+PT V N E+L V A+ GV+ + + GT L +G V PG Sbjct: 183 PPRPEEIGLRGRPTLVQNAESLAAVAALFRLGVDRVRAVGTPTCPGTALFTVTGAVDRPG 242 Query: 261 LWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSR 320 ++E+P GT ++L R+ + A PGG G+ L LD+P+ +E + GS Sbjct: 243 VYEVPHGTPLAQLLALAGAPPRE--EILAVLPGGLGSGPLRPDELDVPLTYEDLAALGSS 300 Query: 321 LGTALAMAV-DHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPG 379 LG + + + + LVR AR SCG C CR+G +LRALE G+ Sbjct: 301 LGNSAVVVFRRADATLPDLVRENVALLARGSCGQCRGCREG---HEGLLRALEAGDATEA 357 Query: 380 DIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFR 416 + L G+ CA G A++ F Sbjct: 358 -----RRRAEVLLYGRGNCAFPTGTARFALRALQEFP 389 >UniRef50_A5X3H0 HtxX n=1 Tax=Xanthobacter flavus RepID=A5X3H0_XANFL Length = 496 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 118/392 (30%), Positives = 172/392 (43%), Gaps = 22/392 (5%) Query: 18 RDDKQPVWLDEYRSKNGYEGARKALTGLSPDE-IVNQVKDAGLKGRGGAGFSTGLKWSLM 76 R +YR+ GY R+ + ++ Q+ GR G GF G KW + Sbjct: 114 RPAPVARTFADYRAAGGYGQLRRVMADPGAAARMLAQLSAHQAVGRAGVGFPVGEKWRQV 173 Query: 77 PKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEY 136 + ++ N DE E +KDR ++E PH ++E L++A A ++++R +Y Sbjct: 174 MAAGGTPV--VIVNGDEGELAIFKDRFILETDPHGVLEAALVAARVTGADLVFLYVRDDY 231 Query: 137 IEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRAN 196 +RRA+ E AGL L + G +ICGEETALI SLEGR A Sbjct: 232 APIHAIVRRALEEVAAAGLAE--------GIGLELRRSGGAFICGEETALIASLEGRAAR 283 Query: 197 PRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRV 256 P +PPFP T G G+PT ++NVET + A G S D +L SGRV Sbjct: 284 PTERPPFPTTRGYLGRPTLLHNVETFYRLTAA--WGGTPGSPASVLLDPQVRLFSVSGRV 341 Query: 257 KNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGK 316 PG + G + L + AGGM++G GG+ + A P+ + Sbjct: 342 CAPGPKPVR-GLSRLADLVEIAGGMQNGHALGGLVIGGSSGTLVGAADCRRPLA--DLLA 398 Query: 317 AGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEG 376 G RLGT A+ + ++ + + ARESCG C PCR G + +IL A + Sbjct: 399 EGLRLGTGGAIVFGADDEPRAIAARMAAYLARESCGQCGPCRIGTAHAARILAAPGPLDL 458 Query: 377 QPGDIETLEQLCRFLGPGKTFCAHAPGAVEPL 408 + L +G G + CA A L Sbjct: 459 PLL-----DDLATVMGEG-SLCALGRNAGRFL 484 >UniRef50_B4V5Q7 Oxidoreductase n=1 Tax=Streptomyces sp. Mg1 RepID=B4V5Q7_9ACTO Length = 481 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 97/406 (23%), Positives = 164/406 (40%), Gaps = 29/406 (7%) Query: 34 GYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNI--RYLLCNA 91 G+ AL D++++ + L+GRGGAGF K + + ++ NA Sbjct: 31 GHLTVHGALPQYRVDDLIDLAEAIDLRGRGGAGFPFHRKLRAVMRSARAKEGRSAVVVNA 90 Query: 92 DEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEAT 151 E EP KD L+ +PH++++G ++A AL A + + + +E ++R AIAE Sbjct: 91 SEGEPSCLKDTALLLHVPHVVLDGAQLAADALGAEDVVVGVTRDDVE--RSVRDAIAER- 147 Query: 152 EAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWG 211 G L V R++ GE T++IN +EG A P + + G G Sbjct: 148 ------------GPGTRLRVSRLPERFVTGEGTSMINGIEGNPAVPNGQKVRTSERGLTG 195 Query: 212 KPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAR 271 PT ++N ET + G Y ++ + GT ++ SG E+P GT+ Sbjct: 196 LPTLLSNTETYAQLAIAARLGAAGYNSVGLPAEPGTLMLTVSGATA----VEIPSGTSLA 251 Query: 272 EILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLP-MEFESIGKAGSRLGTALAMAVD 330 +LE G GG +LT + +S+ + LG + + Sbjct: 252 YVLELCGSSPGQG-----VLVGGYHGRWLTPEDASQALLSRQSLAAFDAVLGAGAVLPLP 306 Query: 331 HEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRF 390 + V + + A E+ G C PC GLP + + G G+ E +E R Sbjct: 307 EDTCPAGEVARVTRWMADETAGQCGPCVRGLPSLATAVEQMVAGGGR-ATFEAVEARMRA 365 Query: 391 LGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLINGI 436 + G+ C+H G + SA+ F +E ++ + Sbjct: 366 V-RGRGACSHPDGTSGFVASALNVFADELRDHALGSGCGRRVVGAL 410 >UniRef50_Q18DS5 NAD-reducing hydrogenase, alpha subunit n=1 Tax=Haloquadratum walsbyi DSM 16790 RepID=Q18DS5_HALWD Length = 502 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 102/415 (24%), Positives = 168/415 (40%), Gaps = 43/415 (10%) Query: 21 KQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDE 80 ++P +D+Y + G+ L + PD + + + +G G A + L + M D+ Sbjct: 122 RRPANVDDYDAAGGF------LKDIDPDAVFDAGESIHGRGWGDACHDSPLTKTWMDADD 175 Query: 81 SMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAA 140 + ++ NA PG D LL+ +P +++G + A + A IF A+ Sbjct: 176 AEGEAAIVINA-HSNPG---DSLLLSSVPFTILDGAVSLAQTVDASEIVIF-------AS 224 Query: 141 VNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG-RRANPRS 199 + I A A N + + TG Y E T + ++EG R R Sbjct: 225 IADESTIETARTAIDRYPNES----SIAIDLVTGPAEYRAAEPTMALEAIEGNHRLEARL 280 Query: 200 KPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNP 259 +PP P + G +G+PT ++ TL ++ L S T++M G V + Sbjct: 281 RPPGPESVGLYGRPTLIHTARTLAHLAVSLRED-------SIDSHPSTRIMSIEGDVTDR 333 Query: 260 GLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGS 319 + E+P TT E KA GG A LD+ ++ E++ + Sbjct: 334 TIIEVPETTTL----ETVCAAADTTDGIKAACVGGRFGGL--AADLDISVDPETL--IDA 385 Query: 320 RLGTALAM-AVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQP 378 LGT + + + +V V +F A E+CG C PCR+G ++LR+L G QP Sbjct: 386 NLGTEGIVHVLSEDRCVVEFVGERAQFAAEENCGRCVPCREGTTQLAELLRSLYDGTYQP 445 Query: 379 GDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLI 433 I+ L ++ + C A P Q+A+ F EFEA T Sbjct: 446 EAIDELIRVMTT----TSICEFGVNAGRPTQTALNAFESEFEAH-ANGRCPTGSC 495 >UniRef50_D2RYM8 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RYM8_9EURY Length = 565 Score = 265 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 108/445 (24%), Positives = 172/445 (38%), Gaps = 40/445 (8%) Query: 7 TPETHPLTW-RLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGA 65 TPE PL+ R R + W+D + L G PDE +++V+D GL GRG Sbjct: 131 TPEDGPLSVGRRRVLGRCGWVDPASVPDESAAE---LAGDDPDEALSRVRDVGLLGRGRG 187 Query: 66 GF----STGLKWSLMP---------KDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLL 112 + +W L D + ++ N +E + DR L+E P + Sbjct: 188 DWSVDDPVAEEWELAREAAAEGADEGDSEADEPVVVVNGNESDDRNATDRTLLEAAPGEV 247 Query: 113 VEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVH 172 ++G L A + A ++ A + A A E + V Sbjct: 248 LDGALAVAELVGADDVVVYCNENDDRARERVHEAARNAEERFAERLDRESGP-----EVV 302 Query: 173 TGAGRYICGEETALINSLEGR-RANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILAN 231 G RYI GE T + ++EG R R +PP PA G +G+PT V+ T+ V L Sbjct: 303 VGPDRYIAGEPTMALEAMEGNDRLEARLRPPSPAEHGLYGRPTIVHTPRTMAQVRRALLA 362 Query: 232 GVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQ 291 E+ + D GT+L +G V ELP G + ++ E +G FK Sbjct: 363 PDEFDAD---DADPGTRLFTVTGDVDAAATVELPTGGSLADVRETV---DLEGR-FKMAC 415 Query: 292 PGGAGTDFLTEAHLDLPMEFESIGKAGSRLGT-ALAMAVDHEINMVSLVRNLEEFFARES 350 GG F L + G+ LGT + ++ + +++ F E+ Sbjct: 416 VGGQFGGFTRS----LSQSPSAPALEGAELGTEGVVELLNEDNCVLATAGRRANFAMEEN 471 Query: 351 CGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQS 410 CG C CR+G +LR + G+ Q + +L R +G + C A+ P + Sbjct: 472 CGRCVTCREGSQELTNMLRDIYDGQYQDA---KIRELTRVMGE-TSICQFGRTAIRPAVT 527 Query: 411 AIKYFREEFEAGIKQPFSNTHLING 435 ++ F E A + + G Sbjct: 528 GMREFEREVAAH-TEGRCPSGECEG 551 >UniRef50_Q2J9U3 Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit n=3 Tax=Frankia RepID=Q2J9U3_FRASC Length = 510 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 106/420 (25%), Positives = 178/420 (42%), Gaps = 57/420 (13%) Query: 46 SPDEIVNQVKDAGLKGRGGAGFSTGLKWSL------------------------------ 75 P ++ ++ D+GL GRGGA F T K + Sbjct: 93 GPGRLLPEIHDSGLTGRGGAAFPTWRKLAASAEGTCLDGSHSGSAHRGSTHRGSQHRNAG 152 Query: 76 --MPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLR 133 + S ++ NA E EP + KD L+ PHL+++G+ ++A A+ A +++L+ Sbjct: 153 HRADRYRSSAHPVVVANAAEGEPESAKDVTLLTVAPHLVLDGLQLAAEAVGADDAFVYLK 212 Query: 134 GEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGR 193 A +RRA+A+ AG F + + ++ GE +A+I +LEG Sbjct: 213 P--GPAVTAVRRALAQRRAAGW---------DRFTVQIREAPETFVAGEASAVIAALEGG 261 Query: 194 RANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFS 253 A PR+ A +G G+PT V N ETL ++ I G W++++ +++ GT L + Sbjct: 262 AARPRAHWQPLAEAGFHGRPTLVQNAETLAHLALIARWGASWFRSVGTAEEPGTFLATVT 321 Query: 254 GRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEA-HLDLPMEFE 312 G V PG+ E+PFGT + AGG + + A++ GG +L + M Sbjct: 322 GAVAAPGVVEVPFGTPLGTL-AQLAGGFTE--QVGAFRVGGYSGAWLPGGPGATIAMSRA 378 Query: 313 SIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALE 372 ++ G+ GT + + + + + A ++ G C PC GLP + + Sbjct: 379 ALAPWGAAPGTGVVAVLPARGCGLVETARIVGYLAAQNAGQCGPCVSGLPQLADAVAGMA 438 Query: 373 R----------GEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAG 422 R G G PG L G+ C H GA + SA++ F ++ A Sbjct: 439 RTDGGSGGPVQGAGDPGQSAIRALRLAALVAGRGACHHPDGAARLVHSALRTFVDDIRAH 498 >UniRef50_D1A5I5 NADH dehydrogenase (Quinone) n=2 Tax=Actinomycetales RepID=D1A5I5_THECD Length = 505 Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats. Identities = 102/433 (23%), Positives = 167/433 (38%), Gaps = 58/433 (13%) Query: 22 QPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKD-- 79 + LD +R+ +G AL + +E++ + ++GRGGA F K + K Sbjct: 22 DRIDLDRHRALHG------ALAVPTLEELLKITEAVDIRGRGGAAFPFARKLMAVAKQVG 75 Query: 80 -------------------ESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISA 120 ++ N E EPG+ KD++L+ + PHL+++G I+A Sbjct: 76 RPGDVDDFLLPGEEDDHRGRRQKRAVVVVNGSEGEPGSKKDKVLLTRNPHLVLDGAQIAA 135 Query: 121 FALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYIC 180 AL I + E AA ++R AI E V R+I Sbjct: 136 TALGTRDIVIAIEDE--TAARSMRAAIVERR---------------MPAEVVRLPERFIS 178 Query: 181 GEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNIS 240 GE A+I ++ G P + A SG G+PT ++N ET + +++ G + Y ++ Sbjct: 179 GESGAVIRAINGETPIPPGRKVRAAESGVDGRPTLLSNTETFAQLAVLVSLGPDLYASVG 238 Query: 241 KSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFL 300 + GT L+ G E P GT + G++ G + GG +++ Sbjct: 239 TDSEPGTTLLTVGGTTVV----ECPLGTPLASVFAQC--GVQPG---QGVLVGGYHGEWI 289 Query: 301 TEAHLDLPM-EFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRD 359 T + G LG + + + + V + + A +S G C PCR Sbjct: 290 TPEAARTAIVSRAGFQAVGGSLGAGIILPLPEGTCPLREVARIASYMAGQSAGQCGPCRL 349 Query: 360 GLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEF 419 GLP + L AL G G P L + +G G+ C+H G SA+ F + Sbjct: 350 GLPDLYRSLEALVDGSGSPE----LVRRAAGIGRGRGACSHPDGTARFALSALNTFARDI 405 Query: 420 EAGIKQPFSNTHL 432 E Sbjct: 406 EIHQLNGTCGQPC 418 >UniRef50_B1CC51 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CC51_9FIRM Length = 357 Score = 254 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 96/404 (23%), Positives = 171/404 (42%), Gaps = 68/404 (16%) Query: 16 RLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSL 75 + P+ LD+Y + GYE + K + + ++++ +KDA L R +WS Sbjct: 19 KYCGAVNPICLDDYVAFGGYEASSKVVN--NEVDVISILKDANLVARKKLNELCADRWS- 75 Query: 76 MPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGE 135 ++C + +P D + + PH++VE M+I A +G I + E Sbjct: 76 -------GAETVVCETE--DPMATLDLKVQTEAPHVIVEAMIIFMHVNNAKKGVIVVNDE 126 Query: 136 YIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRA 195 A L +A+ +A AGL K+I+ + S++G + Sbjct: 127 --LAYNRLNKAVTDAKNAGLNDKDIIVSKV-----------------------SIDGLKE 161 Query: 196 NPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR 255 N + L NV AI+ N + + G K + G+ Sbjct: 162 ----------------------NAQLLANVVAIVQN------SYKPAPAKGLKGVAIGGK 193 Query: 256 VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIG 315 VKNPG++E+ GTT R+++E+ AGG K KA + G ++L+ LD + F S+ Sbjct: 194 VKNPGVYEIEDGTTYRKLIEEIAGGATG--KVKAIKVGAPYGEYLSSDILDEKINFMSLM 251 Query: 316 KAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGE 375 G GTAL + +D +M + + F SCG C PC+ G ++++ + +G Sbjct: 252 MNGMVRGTALIVVLDESTDMAKEISDYLGFLLNVSCGKCFPCKVGTKRMDEMVKEVVKGN 311 Query: 376 GQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEF 419 + ++ + + G T C P+ +A++ FR++F Sbjct: 312 ATKENYNMIKSIAVNMNIG-TLCPIGQKGAVPVLTALENFRDDF 354 >UniRef50_C4RMV1 Oxidoreductase (Fragment) n=6 Tax=Actinomycetales RepID=C4RMV1_9ACTO Length = 382 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 89/375 (23%), Positives = 150/375 (40%), Gaps = 26/375 (6%) Query: 35 YEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLM--PKDESMNIRYLLCNAD 92 +E + + P ++ + LKG+GGAGF K + + ++ NA Sbjct: 31 HEEVHGPIGPMEPANLLRLAEAIQLKGKGGAGFPFARKLRAVLESCERQDASAIVVVNAT 90 Query: 93 EMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATE 152 E EP ++KD++L+ + PHL+++G + A+AL A I + + + +L A+ E Sbjct: 91 EGEPASWKDKVLLARAPHLILDGAALVAYALDADEIVIGVADDDV-GRPSLTEALQERR- 148 Query: 153 AGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGK 212 + T R+I GE AL+N + G P + SG G Sbjct: 149 ------------MPVPTSMVTVPDRFISGEGGALVNGINGLPHIPPGTKKRSSDSGVNGL 196 Query: 213 PTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTARE 272 PT ++N ET + G Y + + GT L+ +G K P + E GT R+ Sbjct: 197 PTLLSNAETYAQLAVAARLGPYEYAALGTDDEPGTLLLTVTGAAKRPAVVECAAGTPLRD 256 Query: 273 ILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLP-MEFESIGKAGSRLGTALAMAVDH 331 ILE + DG GG ++T + + + G LG + + + Sbjct: 257 ILELCE--VPDGP---GVLMGGYHGKWITAEAAQRAEVSRKGLTAVGGTLGAGIIVPLGR 311 Query: 332 EINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFL 391 + + + + A ES G C PC+ GLP + + G IE + + Sbjct: 312 DTCPLGEAAQVVRYLAGESAGQCGPCKMGLPDLARAVDLAVSGSAP---IEIVRAAAGDV 368 Query: 392 GPGKTFCAHAPGAVE 406 G+ C+H G Sbjct: 369 -KGRGACSHPDGTAR 382 >UniRef50_B5HXD6 Oxidoreductase n=2 Tax=Streptomyces RepID=B5HXD6_9ACTO Length = 505 Score = 233 bits (595), Expect = 9e-60, Method: Composition-based stats. Identities = 97/396 (24%), Positives = 167/396 (42%), Gaps = 18/396 (4%) Query: 38 ARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKD--ESMNIRYLLCNADEME 95 L + +++ + LKGRGGAGF K + + + ++ N E E Sbjct: 5 VHGPLEPMGGEQLAKLSEAINLKGRGGAGFPFHKKLRSVAEAAIKRGVRPVVVVNGSEDE 64 Query: 96 PGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGL 155 P KD +L+ + PHL+++G L++A AL A I + E + ++ A+AE + Sbjct: 65 PACRKDTVLINRAPHLILDGALLAAEALGARTLVIGVTRESTQ--RSMEAALAERGLSN- 121 Query: 156 LGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTC 215 G V R + G +LI S++G A P + + +G G PT Sbjct: 122 ------GRRSALRARVQRNPVRMVTGAAASLIRSIDGGPAIPPGRKVSASQNGVGGAPTL 175 Query: 216 VNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILE 275 ++N ET + G E Y N + GT ++ SG V P + E+P G R +L+ Sbjct: 176 LSNAETFAQLAIAARIGPERYGNTGLYDEPGTVMLTVSGAVARPMVIEVPTGVPLRYVLQ 235 Query: 276 DYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPM-EFESIGKAGSRLGTALAMAVDHEIN 334 + GG ++ A ++ + S+ G LG + + E Sbjct: 236 LAGAPPVP----QGVLTGGYHGKWIDAATVNEAIVSRNSLDAVGGALGAGAILPITQETC 291 Query: 335 MVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPG 394 + + ++ A ES G C PC GLP + + + + G G P +E L+Q+ + + Sbjct: 292 PLGESLRVAQWLAEESAGQCGPCYLGLPAAARGMEDILNG-GGPAALEALKQVAKNVKR- 349 Query: 395 KTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNT 430 + C+H G+ L+S IK F ++ A + Sbjct: 350 RGACSHPDGSAMFLESTIKAFTDDLAAHVLGNGCGR 385 >UniRef50_C1V5Z7 NADH dehydrogenase subunit F n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=C1V5Z7_9EURY Length = 513 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 103/435 (23%), Positives = 168/435 (38%), Gaps = 41/435 (9%) Query: 8 PETHPL-TWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGG-- 64 P+ PL R + W++ E A++ + + ++ GL GRG Sbjct: 109 PDEGPLRVGCRRVLGRCGWVNPTEPPT--ESVLDAVSD-DSESVCTEIHRIGLLGRGRGD 165 Query: 65 --AGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFA 122 A W+ K + L+ NA++ + D L+E +V+ + A Sbjct: 166 ARADRPVAEGWATARKTDGD--TVLVVNANDADERNRTDSTLVEGDAGGVVDAAMAVAHL 223 Query: 123 LKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGE 182 ++A ++ AA L A + + + V G RYI GE Sbjct: 224 VEAEDVIMYA-QTGSMAAERLSAAASRYRDE-----------YGDAPQVAVGPERYIAGE 271 Query: 183 ETALINSLEGR-RANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISK 241 T + SLEG R R +PP P T G +G+PT ++ TL V + E+ + Sbjct: 272 PTMALESLEGNDRLEARLRPPGPETHGLYGRPTVIHTPRTLLQVREAILRPEEFDAD--- 328 Query: 242 SKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLT 301 D GT+++ +G V +P EL G R D + K GG Sbjct: 329 DADPGTRVVTVTGDVDSPATVELTTGAPLRAAAAAV-----DRTETKMAIVGGQFGGVTR 383 Query: 302 EAHLDLPMEFESIGKAGSRLGT-ALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDG 360 HLD + ++ G+ LGT + + ++ V + F + E+CG C PCR+G Sbjct: 384 --HLDHTLSAPALS--GANLGTEGVVELFGDDRCALATVGSRARFASEENCGRCVPCREG 439 Query: 361 LPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFE 420 +LR + G+ D +TL +L R + T C A +++A+ F EFE Sbjct: 440 TTQLTDLLRDIYAGDY---DDDTLRELTRTMRNTST-CDFGRSAARTVETAMAAFEAEFE 495 Query: 421 AGIKQPFSNTHLING 435 A T + Sbjct: 496 AH-THGRCPTGQCDA 509 >UniRef50_C7Q9V1 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q9V1_CATAD Length = 418 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 124/417 (29%), Positives = 179/417 (42%), Gaps = 42/417 (10%) Query: 8 PETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGF 67 P + PL R D++ D Y GY LSPD +VN++K AGL+GRGGAGF Sbjct: 9 PGSAPLLGE-RPDRREAR-DAYWHAGGYR-------DLSPDLLVNRIKAAGLRGRGGAGF 59 Query: 68 STGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYR 127 K + S+ + ++ N E EPG+ KDR LM PHL+++GML +A +A R Sbjct: 60 PAAAKLLAVRAAGSVPV--VVANGGEGEPGSVKDRWLMRARPHLVLDGMLRAADITRAAR 117 Query: 128 GYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALI 187 Y+++ + EAA ++RRA+AE + A Y+ GEETA++ Sbjct: 118 CYVYVADD--EAAESMRRALAEREPY-------------VPTQIVRVAHTYVAGEETAVV 162 Query: 188 NSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGT 247 + G A P +KPP P SG G PT V NVETL + + A + + Sbjct: 163 RRINGGPALPTAKPPRPFESGVDGVPTLVANVETLARIALLAAR----------PQTPDS 212 Query: 248 KLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDL 307 L+ SG P L E P GT+ + + D L GG L L Sbjct: 213 LLLTVSGPGLEPELVEAPVGTSLQALAYRA-----DRLGTPGVLMGGMFGGILDPRGLRT 267 Query: 308 PMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKI 367 +E ++ AGS LG + V+L F A ES C C G + Sbjct: 268 ELEAAALTAAGSALGCGAVHFLAPGECPVALAAEGLAFLADESSRQCGVCVTGTAALART 327 Query: 368 LRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIK 424 + + G +P D+ L + + L + C A S ++ F EA I+ Sbjct: 328 MASAVHGTAEPDDLARLSKWSQSLRR-RGACGLLDAAANLAASLLRSFGPLTEAHIE 383 >UniRef50_Q5V638 Putative NADH dehydrogenase I, F subunit n=1 Tax=Haloarcula marismortui RepID=Q5V638_HALMA Length = 507 Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 82/371 (22%), Positives = 142/371 (38%), Gaps = 31/371 (8%) Query: 65 AGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALK 124 A W + + + ++CNA++ D L+ P +++G+ A + Sbjct: 162 ADEPVADTWETASETDGDPV--VVCNANDASDLPTGDDTLLSGAPMAVLDGIAAVAEYVD 219 Query: 125 AYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEET 184 A +++ + +LR AI A + + + G + GE T Sbjct: 220 AGDAVVYVNESQTDVQADLREAIDAAADTLPVVP-----------QLVAGPDEFRAGEPT 268 Query: 185 ALINSLEG-RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSK 243 A + +LEG R PR +PP PA G +G+PT V+ T V +A+ + + Sbjct: 269 AALEALEGADRIEPRLQPPSPAKRGLYGRPTVVHTPRTFAQVQQAVADPGSVDAD---AA 325 Query: 244 DAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEA 303 D GT+++ +G V + EL + + + + FK GG Sbjct: 326 DPGTRIVAVAGDVADSATVELRSSASLAAVRKA----VEMDGSFKMACVGGVLGGVTRS- 380 Query: 304 HLDLPMEFESIGKAGSRLGTALAM-AVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLP 362 LD+ +S+ AG LGT + D V V F + E+ G C P R+G Sbjct: 381 -LDMAPTAQSLRAAG--LGTNGVVELFDTGRCTVETVGKRARFASMENSGRCVPGREGTK 437 Query: 363 WSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAG 422 ++LR + G + + + +L R + + C A P+ +AI F EF A Sbjct: 438 QLAELLRDIYDGSF---ENDKIRELSRVMRQ-SSNCQTGAHAPRPVTTAIDEFEPEFRAH 493 Query: 423 IKQPFSNTHLI 433 + Sbjct: 494 -TDGHCPSGTC 503 >UniRef50_A1SNE6 Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit n=1 Tax=Nocardioides sp. JS614 RepID=A1SNE6_NOCSJ Length = 412 Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 88/364 (24%), Positives = 157/364 (43%), Gaps = 30/364 (8%) Query: 61 GRGGAGFSTGLKW-SLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLIS 119 GRGGA F +K + + ++ N E EP + KD L PHL+++G + + Sbjct: 59 GRGGAAFPFEVKLRTAADRSRQGRRPVVVVNLSEGEPASAKDSALALTRPHLVLDGAVAT 118 Query: 120 AFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYI 179 A+AL A ++ + E +R A+AE + +HT GR++ Sbjct: 119 AYALGARELHVVVPQERPLVGTAIRAALAERRDR-------------LRTHLHTAQGRFV 165 Query: 180 CGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNI 239 G+ A++ + GR P + A +G G+PT ++N ET V ++ G E Y + Sbjct: 166 AGQARAVLELMAGRPNLPVTAWSPEAVAGHRGRPTLLSNAETWAQVGRLVLAGEERYAAL 225 Query: 240 SKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDF 299 + + GT L+ S + E+ G+ R++L + G ++ GG + Sbjct: 226 GSADEPGTTLLTLSAATST--VVEVELGSPWRDVLPEAWAG-------RSLLVGGFHGAW 276 Query: 300 LTEAHLDL-PMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCR 358 + A L + +++ A + LG + +A V+ + ++ A +S C PC Sbjct: 277 VPWATLVAGRVSVDAMRAAETPLGAGVVVA--PRGCPVAFTARVVDYLAAQSARRCGPCL 334 Query: 359 DGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREE 418 +GLP + ++ + G G P +E L L G+ CAH G ++S + F +E Sbjct: 335 NGLPALARAVQEVVDGAGHPERVEGLAALVT----GRGACAHPDGTARLVRSMLATFPDE 390 Query: 419 FEAG 422 Sbjct: 391 VTRH 394 >UniRef50_UPI0001B56646 respiratory-chain NADH dehydrogenase domain-containing protein n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B56646 Length = 347 Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 106/380 (27%), Positives = 158/380 (41%), Gaps = 44/380 (11%) Query: 45 LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLL 104 + D +++++ AG++GRGGAGF K + S ++ N E +P + KDR L Sbjct: 1 MDRDALIHEIDVAGIRGRGGAGFPAAAKLRSVAPGRS----IVVANGCESDPFSSKDRAL 56 Query: 105 MEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTG 164 +E PHL+++G+ ++A A+ A Y+ LR E ++ A+AE +A + Sbjct: 57 LELAPHLVLDGIQVAAHAVGATEAYLCLR----EGNRSVLAALAERRDAVPVKV------ 106 Query: 165 FDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCN 224 RY+ EETAL++ L A P K P P G G+PT V NVETL Sbjct: 107 -------VAVPHRYVASEETALVHFLGSGDARPTGKFPRPTERGLRGRPTLVQNVETLAR 159 Query: 225 VPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDG 284 + G + + T L+ +G V PG+ E+P T IL G + Sbjct: 160 FALVARTGADRFVP--------TDLVTVTGAVARPGVMEVPADTPVSAILARAGGSV--- 208 Query: 285 LKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEE 344 +A GG G ++ + D G G + + V L RN+ Sbjct: 209 -TAQAVLIGGYGGTWMPRSLAD-------PLPLGREPGLSSLHLLPDSHCGVELTRNILH 260 Query: 345 FFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGA 404 A ES C PC GLP L G G + L G+ CAH GA Sbjct: 261 TLAGESARQCGPCMFGLPAVAADFTDLLSGRDATGRLARRLPLLS----GRGACAHPDGA 316 Query: 405 VEPLQSAIKYFREEFEAGIK 424 V SA++ F + A + Sbjct: 317 VRLAASALRVFAADVHAHLT 336 >UniRef50_C7LYX8 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LYX8_ACIFD Length = 408 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 100/393 (25%), Positives = 155/393 (39%), Gaps = 42/393 (10%) Query: 20 DKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKD 79 D P+ LD +R+ G R L + GRGGAGF K + + Sbjct: 29 DAPPLSLDAHRAIYGSLPPRPPLAT-----------AEHIVGRGGAGFPLARKLAAVASQ 77 Query: 80 ESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEA 139 R ++ N E EPG KD+ L+ PHL+++G+ ++ L+A + + A Sbjct: 78 RG--PRVVVANGAESEPGARKDKALLTHAPHLVLDGLGLATRLLEAREAIVAVED--ATA 133 Query: 140 AVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRS 199 A L RAI E ++A + V Y+ G+ETAL+ +LEGR A PR Sbjct: 134 ADVLERAIRERSDA---------------VRVALLDRSYLTGQETALLAALEGRPALPRF 178 Query: 200 KPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISK-SKDAGTKLMGFSGRVKN 258 + A G +PT V NVETL G W+Q+ D T+++ + Sbjct: 179 QLARVAERGYKSRPTLVANVETLAQWALAARFGTSWHQSAGTRGHDRSTRIVSIALPGST 238 Query: 259 PGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAG 318 P + EL G T R +L+ A G+ GL G + A + ++ Sbjct: 239 PTVVELAPGATVRSLLD--AVGVTTGLALVGGLFGELISVADERAMARVLVDRADSSDEL 296 Query: 319 SRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQP 378 + LG + +V L + + E G C PC GLP + L +P Sbjct: 297 A-LGAGSVLLAPSATCVVCATSELVGYLSEERAGQCGPCDRGLPELARALG----AGARP 351 Query: 379 GDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSA 411 ++ T+ +L + CA A + Sbjct: 352 AELATVARLI----ARRGACALPDAAAHLATAI 380 >UniRef50_D2S0Q1 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding protein n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2S0Q1_9EURY Length = 495 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 99/422 (23%), Positives = 162/422 (38%), Gaps = 62/422 (14%) Query: 21 KQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDE 80 ++P + ++++ G+ S E V V + L GRG W + +D+ Sbjct: 121 RRPTSVADHKAAGGFAP--------SDAETVLNVGSS-LNGRG---------WEDLCQDD 162 Query: 81 SMNIRYLLCNADEMEP-------GTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLR 133 S+ + A + +P G+ D LL+ P +++G + A + A R ++ Sbjct: 163 SLAETWRTARATDGDPVVVVNGHGSPADTLLLSSAPFEVLDGASVLANTVAADRIVVYAS 222 Query: 134 GEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG- 192 E A A+ + + V TG Y E T I ++EG Sbjct: 223 SEDDTAVKTASSAVDTYPDPA------------APMEVVTGPKEYRAAEPTMAIEAIEGN 270 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGF 252 R R +PP P G G+PT V+ TL ++ L G+E T++M Sbjct: 271 HRLEARLRPPGPERLGLDGRPTLVHTPRTLAHLAVGLREGIEE----------QTRVMTV 320 Query: 253 SGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFE 312 G V EL E++ FKA GG + LD+ + E Sbjct: 321 RGDVDAVATVELSETRKLSELVNTVGV----DGSFKAACVGGRFGGITRD--LDVEIGLE 374 Query: 313 SIGKAGSRLGTALAM-AVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRAL 371 ++ A LGT + + +V V F A E+CG C PCR+G +LR + Sbjct: 375 ALDNAD--LGTDGIVDVLSDAQCLVEFVGQRASFAAEENCGRCVPCREGTAQLTLLLRNV 432 Query: 372 ERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTH 431 G+ D + +++L R + + CA A P ++AI+ F EFEA + Sbjct: 433 YDGDF---DAQAIDELGRVMA-SSSICAFGERAGRPARTAIEAFTSEFEAH-AEGRCPAG 487 Query: 432 LI 433 Sbjct: 488 TC 489 >UniRef50_C0R1F3 DH dehydrogenase n=3 Tax=Brachyspira RepID=C0R1F3_BRAHW Length = 387 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 66/350 (18%), Positives = 140/350 (40%), Gaps = 29/350 (8%) Query: 79 DESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIE 138 D ++ ++L NA + +KD+ L+ PHL+++G + A L R I L+ Y+E Sbjct: 60 DGNIKEDFILINAASFDYLVFKDKFLLRNNPHLILDGSVFIAKILNIKRIDIVLKDYYLE 119 Query: 139 AAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPR 198 + ++I EA +A + +D E+ ++ Y + N R Sbjct: 120 ERDIILKSIVEAEDANFV--------YDIEINIYDEYAYY--------------NKYNIR 157 Query: 199 SKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKN 258 P F + ++ET+ + + G +++ + G+ ++ +G + N Sbjct: 158 ITPSFLENKKY------IFDLETISQIAYLAHIGGFTFKDYGNGEYKGSNILSITGDIIN 211 Query: 259 PGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAG 318 P L+E T R I++ G +++ + G E + +++E Sbjct: 212 PNLYEFEMHTPLRNIVKAAGGTVKEYTIKCVFTNGFLNPPIDFETFQKMTLDYECFDSLN 271 Query: 319 SRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQP 378 ++G + + ++ +V + +F SCG C+PC +G + + G Sbjct: 272 MKIGNGGICFIQEDRCIIRVVVKIIQFGKSISCGKCSPCHNGFDLCEYYINRMLLGNSNF 331 Query: 379 GDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFS 428 D L++ + G + C + + S ++ FR+EF I+ + Sbjct: 332 DDYSNLKEAVEMIKIGAS-CLYIRSLANCILSTMEMFRDEFVYLIENKIT 380 >UniRef50_D2S0T7 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=2 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2S0T7_9EURY Length = 507 Score = 219 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 85/378 (22%), Positives = 145/378 (38%), Gaps = 33/378 (8%) Query: 60 KGRGGA--GFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGML 117 +GRG A W + + + ++ NA+E + DR L+ P +++G+ Sbjct: 155 RGRGDAIADEPAIDAWERARETDGDPL--IVVNANEPDDRQQADRTLLAGAPIAVLDGVA 212 Query: 118 ISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGR 177 A + A ++L E L+R + +A N + V G Sbjct: 213 AVAEYVGAEDAVVYLN----EHETTLQRHVRQA-------ANAIEDELPVVPDVVVGPDE 261 Query: 178 YICGEETALINSLEG-RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWY 236 Y G TA + ++EG R PR +PP PA G +G+PT V+ T V + Sbjct: 262 YRAGAPTAALEAMEGADRIEPRLQPPTPAEYGLYGRPTIVHTPRTFAQVRQAVHAPESID 321 Query: 237 QNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAG 296 + + D GT+L+ +G V+ P + EL T L+ + K GG Sbjct: 322 AD---APDPGTRLVTVTGDVETPAIVELDSSATLETTLDA----VSMEGSLKMACVGGVF 374 Query: 297 TDFLTEAHLDLPMEFESIGKAGSRLGTALAM-AVDHEINMVSLVRNLEEFFARESCGWCT 355 F T+ L + S+ A LGT + + V+ +F + + G C Sbjct: 375 GGFTTD--LGVAPTARSLTAAD--LGTDGVVELLSDRRCAVATAGERAQFASEANSGRCV 430 Query: 356 PCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYF 415 P R+G ++LR + G + + + +L R + + C A P+ +A+ F Sbjct: 431 PGREGTKQLTELLRDVYAGAFRS---DGIRELGRVMAR-SSNCQIGAHAPRPVTTAMDEF 486 Query: 416 REEFEAGIKQPFSNTHLI 433 EF A + Sbjct: 487 ESEFRAH-ANGRCPSGTC 503 >UniRef50_C8XFQ0 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XFQ0_NAKMY Length = 426 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 95/396 (23%), Positives = 156/396 (39%), Gaps = 23/396 (5%) Query: 41 ALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESM--NIRYLLCNADEMEPGT 98 AL S E+ V AGL+GRGGAGF T K + + ++ N E +P Sbjct: 38 ALPHRSATELAAMVDAAGLQGRGGAGFPTARKIAAVAAAVGKTRRPAVVVANCCEGDPTA 97 Query: 99 YKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGK 158 KDR+L+++ PHL+++G + +A A++A R + + A L A+ E + Sbjct: 98 AKDRVLIDRSPHLVIDGAVAAARAVRADRVVLAVHHGSP-ARQTLAVALTERPDE----- 151 Query: 159 NIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNN 218 + V RY+ E TAL+ L+ A P + P G G+PT V+N Sbjct: 152 -------RVRIEVVAVPARYLASEATALLRFLDTGDARPAGRLPI-WEKGVEGRPTLVDN 203 Query: 219 VETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYA 278 ET ++ I G W+ + + GT L+ G V PG+ E+P G + R++L A Sbjct: 204 AETFAHLALIARFGAGWFGAVGHPAEPGTMLLTLGGAVPRPGVIEVPTGASVRDVLA-CA 262 Query: 279 GGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSL 338 G G G + + + + + G G + ++ Sbjct: 263 GSRPTGWALIGGLAGRWMN---LDRSAGIGLSTPELKEIGMTRGVGSLTVLPPGACLLQE 319 Query: 339 VRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFC 398 + A+ C PC GLP L AL G+ + L + + G+ C Sbjct: 320 TTRIVTHQAQAGARQCGPCMFGLPAIAADLAALAAGDHDA--LARLHRRLPVI-DGRGAC 376 Query: 399 AHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLIN 434 H G V SA+ + +++ + Sbjct: 377 GHPDGTVALTASALGSMNADEPGHLQRHLAGVPCRA 412 >UniRef50_B0K144 Electron transport complex, RnfABCDGE type, C subunit n=11 Tax=Clostridia RepID=B0K144_THEPX Length = 443 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 84/389 (21%), Positives = 138/389 (35%), Gaps = 62/389 (15%) Query: 39 RKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGT 98 + +L LSP EI+ +++AG+ G GGAGF T +K S I +L N E EP Sbjct: 116 KGSLEDLSPKEIIEIIREAGITGMGGAGFPTHVKLSPP---SDKKIDTILVNGAECEPYL 172 Query: 99 YKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGK 158 D LM + P +V G+ A+ RG I + +A + LR A + Sbjct: 173 TTDHRLMVEYPEKIVFGLKAIMKAVGVERGIIGVEKNKPDAILALREASKDEKN------ 226 Query: 159 NIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNN 218 + + T +Y G+E LIN++ GR P+ V N Sbjct: 227 ----------IQIATLKVKYPQGDEKRLINAILGRIV--------PSGGLPMDVGVIVVN 268 Query: 219 VETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDY 277 T V + G Y+ ++ +G +K P + GT ++++E Sbjct: 269 AATTKAVADAILEGKPLYE----------RVTTITGHGIKQPKNLLVKIGTPLKDLIEQ- 317 Query: 278 AGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVS 337 GG + K GG + + LD+P+ GT + + Sbjct: 318 CGGFTEDSPGK-IISGGPMMG-IAQHSLDVPIIK----------GTGGILIL-------- 357 Query: 338 LVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTF 397 + + C C C + P V +L + + E+ Sbjct: 358 -TKKEARPEQVQPCIKCGKCVEVCP--VNLLPLYISSYSLKKNFDKAEEYNALDCVECGS 414 Query: 398 CAHAPGAVEPLQSAIKYFREEFEAGIKQP 426 C++ A PL +I+ + E A K Sbjct: 415 CSYICPAKRPLAESIRLAKREIIAKKKSK 443 >UniRef50_A1SQ39 Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit n=1 Tax=Nocardioides sp. JS614 RepID=A1SQ39_NOCSJ Length = 412 Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats. Identities = 94/375 (25%), Positives = 146/375 (38%), Gaps = 34/375 (9%) Query: 61 GRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISA 120 GRGGA F K +P +L N E EP + KDR LM PHL+++G L A Sbjct: 52 GRGGAAFPVATKLLAVPTGSRTQ---VLVNGSESEPASRKDRTLMTLTPHLVLDGALAVA 108 Query: 121 FALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYIC 180 AL+ I + A +LR A+ E + + AGR++ Sbjct: 109 RALRTRHVTIAVHD--AAALASLRTALDER---------ARDEPIHERVDLRRTAGRFVS 157 Query: 181 GEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNIS 240 GE AL+ L+G A P S+ P+ SG G PT +NVET V +++ G + + Sbjct: 158 GEVRALLRGLDGGPAVPPSRRTLPSDSGLRGAPTFASNVETFAQVALLVSLGATEFGAVG 217 Query: 241 KSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFL 300 ++ GT L+ G + G+ E+P +L G GG ++ Sbjct: 218 NPEEPGTTLLTLLGDTRTQGVVEVPTDLPLDALLPGAGG---------PVLVGGYHGRWV 268 Query: 301 TEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDG 360 + L + AG L + + E+ ++ V + + A +S G C PC G Sbjct: 269 RDVD-GLAAARPGLRAAGLPLNAGVVARLPREVCALAEVTAVTRWLAAQSAGQCGPCLYG 327 Query: 361 LPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFE 420 + L G P L L G+ CAH G + +A+ +E E Sbjct: 328 TAALAHDVGELLHGRAAPAVEARLRGLV-----GRGACAHPDGTTAFVSTALATLGDELE 382 Query: 421 AG-----IKQPFSNT 430 +P++ Sbjct: 383 LHRQHGGCGRPYAGV 397 >UniRef50_A5ZMX0 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5ZMX0_9FIRM Length = 583 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 78/376 (20%), Positives = 145/376 (38%), Gaps = 68/376 (18%) Query: 39 RKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGT 98 K+L L+PDEI++ VK+AG+ G GGAGF T +K + + +L N E EP Sbjct: 265 HKSLDELTPDEIIDIVKEAGIVGMGGAGFPTCVKLK-----PAKPVDTILLNGCECEPYL 319 Query: 99 YKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGK 158 D ++ + ++ G+ A +G I + +A ++ +A+ Sbjct: 320 TADHKVLLEFADDIIFGLKAILKTTGAEKGIIVIEDNKPDAIELMKEKVADIGN------ 373 Query: 159 NIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNN 218 + V +Y G E LI + GR+ PA G V+N Sbjct: 374 ----------MEVFVARTKYPQGAEKTLIKRVMGRKVPSGG---LPADVGVI-----VDN 415 Query: 219 VETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSG-RVKNPGLWELPFGTTAREILEDY 277 + T+ + + G+ + ++ +G ++KNPG + + GT+ ++++ DY Sbjct: 416 ISTVKAISDAIQKGMPLIE----------RVTTITGEKIKNPGNFIIKIGTSVKDLI-DY 464 Query: 278 AGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVS 337 GG D + GG F LD+PM G+ +A+D + Sbjct: 465 CGGFTDDDVL--VKMGGPMMGF-PLNTLDVPM----------MKGSNGIIAIDTDE---- 507 Query: 338 LVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTF 397 + C C C D P + L ++ + + + ++ + Sbjct: 508 --------TKEQPCIKCGRCVDVCPMELSPLYFVK--YAKEENWQGMKDMNVMDCVECRC 557 Query: 398 CAHAPGAVEPLQSAIK 413 C + + P+ ++IK Sbjct: 558 CQYICSSKIPIINSIK 573 >UniRef50_C6L993 Na(+)-translocating NADH-quinone reductase, A subunit n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L993_9FIRM Length = 672 Score = 211 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 79/377 (20%), Positives = 145/377 (38%), Gaps = 70/377 (18%) Query: 39 RKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGT 98 K+L L+PDEIV V++AG+ G GGAGF T +K I +L N E EP Sbjct: 354 HKSLDELTPDEIVEIVREAGIVGMGGAGFPTSVKLK-----PPKPIDTILLNGCECEPYL 408 Query: 99 YKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGK 158 D ++ + ++ G+ + A +G I + +A ++ A+ Sbjct: 409 TADHRVLLEFADDVIYGLKAIIKTVNAEKGLIVIEDNKPDAIELMQAKTADCDN------ 462 Query: 159 NIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNN 218 + V +Y G E LI + GR+ PR PA G V+N Sbjct: 463 ----------IEVVVAKTKYPQGAEKMLIKRVMGRQV-PRGG--LPADVG-----CVVSN 504 Query: 219 VETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSG-RVKNPGLWELPFGTTAREILEDY 277 + T + + G+ + +++ +G RVK PG + + GT +++++ Sbjct: 505 ISTTKAISDAIQKGMPLIE----------RVVTVTGERVKKPGNYIVKIGTNTKDLIDYC 554 Query: 278 AGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVS 337 G + D + KA GG F+ + ++P+ G+ +A+D + ++ Sbjct: 555 GGLVGDDITIKA---GGPMMGFVLKDT-NVPI----------MKGSNGIIAIDTDYSV-- 598 Query: 338 LVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRF-LGPGKT 396 + C C C D P ++ + + ++ + ++ Sbjct: 599 ----------EQPCIKCGRCVDVCPM--ELSPLYFSKYADEQNWQGMKDMNVMDCVECRS 646 Query: 397 FCAHAPGAVEPLQSAIK 413 C + + PL S IK Sbjct: 647 -CEYICSSRIPLVSKIK 662 >UniRef50_C7RDT7 Electron transport complex, RnfABCDGE type, C subunit n=2 Tax=Anaerococcus RepID=C7RDT7_ANAPD Length = 439 Score = 210 bits (535), Expect = 9e-53, Method: Composition-based stats. Identities = 81/396 (20%), Positives = 140/396 (35%), Gaps = 60/396 (15%) Query: 20 DKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKD 79 + + V +D E K L+ +EIV ++K+AG+ G GGA F +K+ Sbjct: 93 NAKAVVIDTEGFDQDKEYIEKDNVDLNAEEIVAKIKEAGIVGMGGAAFPAHIKYL----- 147 Query: 80 ESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEA 139 + + ++ N E EP D LM+ P +++ + + A+ A +G I + +A Sbjct: 148 PAKPVDTVIVNGAECEPYITCDDYLMKNRPERILKALNQAMKAVGAKKGIIAIEDNKPKA 207 Query: 140 AVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRS 199 + A+ + F++ + +Y G+E +I+ R+ Sbjct: 208 FDTMVSALEK----------FAKENSSFDIEIKKLQTKYPQGDEKRIIDVCLNRQV---- 253 Query: 200 KPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKN 258 P+ V+NV T+ + Y+ I K +++ +G+ VKN Sbjct: 254 ----PSGGLPMDVGAIVSNVSTMNAI----------YEAIYMDKPLYERIVTVTGKSVKN 299 Query: 259 PGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAG 318 P + GT ++E+ AGG D K GG L P E S Sbjct: 300 PTNMLVRCGTEFGYLIEE-AGGADDIAKL---VNGGPMCGIAQPD-LTRPTEKAS----- 349 Query: 319 SRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQP 378 ++ L + E C C C D P V +L Sbjct: 350 --------------NCVLVLASDEAEPLEVSPCIRCGRCVDVCP--VYLLPLYIHKFSLE 393 Query: 379 GDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKY 414 E ++L C+ + PL AIK+ Sbjct: 394 ERFEKAQELNIMDCIECGSCSFVCPSNRPLVEAIKF 429 >UniRef50_C9XNL2 Electron transport complex protein n=7 Tax=Clostridiales RepID=C9XNL2_CLODC Length = 445 Score = 209 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 76/381 (19%), Positives = 129/381 (33%), Gaps = 61/381 (16%) Query: 42 LTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKD 101 L LS ++IV +K+AG+ G GGA F +K S P ++ N E EP D Sbjct: 116 LEDLSKEDIVGIIKEAGIVGMGGATFPNHVKVSPPP---DSKAEVVILNGAECEPYLTAD 172 Query: 102 RLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIM 161 LM + P +V G+ L +G+I + +A ++ + + Sbjct: 173 HRLMVENPEDVVFGLRALMKVLDVKKGFIGIETNKPDAIEAIQNVAKDYS---------- 222 Query: 162 GTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVET 221 E+ V +Y G E LI + G+ P+ V+NV T Sbjct: 223 ------EIEVVGLQVKYPQGAEKQLIYACTGKEV--------PSGGLPIAAGAVVDNVAT 268 Query: 222 LCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGG 280 + + G+ + ++ +G +K P GT EI+E GG Sbjct: 269 AAQIAKSIKTGMPLVE----------RITTITGSCIKEPKNLITKVGTLVSEIIEQ-CGG 317 Query: 281 MRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVR 340 ++ K GG + + + G++ + +D E + Sbjct: 318 FKEDKKIGKVIMGGPMMGI-----------AQYTTEIATNKGSSGILCLDEEES------ 360 Query: 341 NLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAH 400 ++C C C D P ++ L D +T E C+ Sbjct: 361 ---RTPDIQNCLRCGRCTDVCPSFLQPL--FISAYSLKDDYDTAEYHRAMDCIECGSCSF 415 Query: 401 APGAVEPLQSAIKYFREEFEA 421 A PL +I+ + E A Sbjct: 416 ICPARRPLLQSIRSAKREIGA 436 >UniRef50_D2RN96 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RN96_ACIFE Length = 455 Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 79/398 (19%), Positives = 144/398 (36%), Gaps = 66/398 (16%) Query: 17 LRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLM 76 +++D Q ++ + ++ ++PD I +++ G+ G GGA F T +K++ Sbjct: 101 IKNDGQDTLCEDIKP--------RSEEEITPDLIRQVLREKGIAGMGGATFPTAVKYA-P 151 Query: 77 PKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEY 136 PK+ I +L N E EP D + + +++G+ A A +G I + Sbjct: 152 PKEGHCPIDTILLNGIECEPFVTADHRTLLEYADEIIQGLKYFMLASGAAKGIIGIEDNK 211 Query: 137 IEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRAN 196 +A +++ +A + + V +Y G E LI + GR Sbjct: 212 PDAIELMQKKVA----------------GEANIEVCVCKEKYPQGSEKHLIYAATGRTVP 255 Query: 197 PRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR- 255 R PA G V+NV T + N + Y+ +++ SG Sbjct: 256 DRG---LPADVGVI-----VDNVGTAVAACRAVKNNIPLYE----------RVVTISGDG 297 Query: 256 VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIG 315 V PG + + GT + +E AGG++ GG F LD P+ Sbjct: 298 VNKPGNYIVRLGTLFSDAVEKAAGGLKGDP--GKIVAGGMMMGFAV-NSLDYPITK---- 350 Query: 316 KAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGE 375 G++ + + + ++ + C C C D P ++ ++ + Sbjct: 351 ------GSSGLLIFNSKSP-------FAQYVEPDPCVHCARCVDACPMKLEPTEIVQAVK 397 Query: 376 GQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIK 413 Q D C + CA A PL I+ Sbjct: 398 KQNWDDAE-RFFCHACIECGS-CAFVCPAHIPLVQYIR 433 >UniRef50_Q65U33 Electron transport complex protein rnfC n=29 Tax=Pasteurellaceae RepID=RNFC_MANSM Length = 723 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 82/386 (21%), Positives = 139/386 (36%), Gaps = 70/386 (18%) Query: 36 EGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEME 95 + S ++++ ++ AG+ G GGA F T K K ++ L+ N E E Sbjct: 122 QNPIDDFLSQSAEQLIEKIYQAGIAGLGGAVFPTAAKIDSAQK----KVKLLIINGAECE 177 Query: 96 PGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGL 155 P D LM P ++EG+ I + L+ + I + EA +++ A+ A Sbjct: 178 PYITCDDRLMRDNPDEIIEGIRILRYILRPEKVVIAVEDNKPEAVQSIKNALQGAN---- 233 Query: 156 LGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTC 215 ++ + +Y G LI L G PA + Sbjct: 234 ------------DIEIRVIPTKYPSGAAKQLIQILTGMEV--------PAGQRSSSIGVL 273 Query: 216 VNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREIL 274 + NV T + + N + +++ +G + N G + FGT +L Sbjct: 274 MQNVGTAFAIKRAIIN----------DEPLIERVVTLTGDKIPNKGNQWVRFGTPISFLL 323 Query: 275 EDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEIN 334 ++ G + + GG LT +LD P+ ++LG +A DH Sbjct: 324 KNV--GYQYDERL-PVFLGGPMMG-LTLPNLDAPI---------TKLGNC-ILAPDH--- 366 Query: 335 MVSLVRNLEEFFARESCGWCTPCRDGLPWSV--KILRALERGEGQPGDIETLEQLCRFLG 392 + +SC C+ C D P + + L R E E + C G Sbjct: 367 -----FEYDPQAREQSCIRCSACSDACPVHLMPQQLYWYARSEDHEKSEEYSLKDCIECG 421 Query: 393 PGKTFCAHAPGAVEPLQSAIKYFREE 418 CA+ + PL I+YFR+E Sbjct: 422 ----LCAYVCPSHIPL---IQYFRQE 440 >UniRef50_UPI0001AF5A30 NADH dehydrogenase I subunit F n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF5A30 Length = 148 Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 111/137 (81%), Positives = 123/137 (89%) Query: 4 IIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRG 63 I RT ETHPLTWRLRDD +PVWLDEY++K+GY ARKALT +PD+IV VKD+GLKGRG Sbjct: 12 ITRTAETHPLTWRLRDDGEPVWLDEYQTKDGYAAARKALTQQAPDDIVQSVKDSGLKGRG 71 Query: 64 GAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFAL 123 GAGF TG+KW LMPKDESMNIRYLLCNADEMEP T+KDR+LMEQLPHLL+EGMLISA AL Sbjct: 72 GAGFPTGVKWGLMPKDESMNIRYLLCNADEMEPNTWKDRMLMEQLPHLLIEGMLISARAL 131 Query: 124 KAYRGYIFLRGEYIEAA 140 KAYRGYIFLRGEY+ AA Sbjct: 132 KAYRGYIFLRGEYVTAA 148 >UniRef50_A5HYR2 Electron transport complex protein n=37 Tax=Bacteria RepID=A5HYR2_CLOBH Length = 439 Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 84/375 (22%), Positives = 135/375 (36%), Gaps = 63/375 (16%) Query: 40 KALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTY 99 K ++ +EI+ ++ AG+ G GGA F T +K S P I ++ NA E EP Sbjct: 114 KDYNEMTKEEIIKLIQQAGIVGMGGACFPTHVKLSPPP---DKKIDSIIVNAAECEPYLT 170 Query: 100 KDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKN 159 D LM + +VEG+ I +GYI + +A +++A Sbjct: 171 CDHRLMLEESDKIVEGLKIILKIFPEAKGYIGIENNKPDAIEAMKKA------------- 217 Query: 160 IMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNV 219 + + V +Y G E LI +++GR PA +G V N Sbjct: 218 ---SEGIANIEVKALKTKYPQGAEKQLIYAIKGREVQSGK---LPADAG-----CVVQNT 266 Query: 220 ETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSG-RVKNPGLWELPFGTTAREILEDYA 278 T+ E Y + + +++ +G VK P + GT RE++E Sbjct: 267 ATV----------REIYNAVVLGRPLIERIITVTGEAVKEPKNIRMKLGTNLRELVEFCG 316 Query: 279 GGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSL 338 G D +K GG T LD+P S G ++SL Sbjct: 317 GYKEDPVK---VISGGPMMGM-TIPTLDIPTVKGSSG-------------------LLSL 353 Query: 339 VRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFC 398 SC C C + P ++ I L+ + G++ + E+L C Sbjct: 354 TTAQAVLPQASSCIRCGRCVEACPMNL-IPSTLDSLSNR-GELASFEELHGIDCIECGCC 411 Query: 399 AHAPGAVEPLQSAIK 413 A L +I+ Sbjct: 412 TFVCPAKRHLIQSIR 426 >UniRef50_A6LZW7 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LZW7_CLOB8 Length = 414 Score = 204 bits (519), Expect = 5e-51, Method: Composition-based stats. Identities = 81/332 (24%), Positives = 129/332 (38%), Gaps = 58/332 (17%) Query: 102 RLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIM 161 R L+EQ +++G+ I L + I+L Y N Sbjct: 45 RYLLEQHISKVIDGIKICQKELGIEKVKIYLSECY---------------------SNFK 83 Query: 162 GTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVET 221 +E+ V G + A + + T V+N ET Sbjct: 84 MQLESYEIEVVLV------GNKKAF-------------------EKDVFNEVTLVHNAET 118 Query: 222 LCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGM 281 + + L K++ +G VKN G++E+PFGT+ REI+ +Y GG Sbjct: 119 MYALKNSLE-----------ENYIPKKIISIAGDVKNSGIYEIPFGTSLREIISEYGGGT 167 Query: 282 RDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRN 341 K Q GG TE LD P + ++ G+ L + + ++ +V+ V Sbjct: 168 ESEKAIKFVQVGGNTGAVFTEEELDTPFLYSNLIGNGTMLEVSKIEVYNVDMCVVNWVTQ 227 Query: 342 LEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHA 401 ++E+CG C CR+G+ KI++ G+G+ DI QL + G T C Sbjct: 228 KMLDNSKETCGKCVYCREGIYQLYKIIKDATEGKGKESDINLALQLSETIKIG-TLCDFG 286 Query: 402 PGAVEPLQSAIKYFREEFEAGIKQPFSNTHLI 433 A PL +AI FR+EFE I + +T Sbjct: 287 RTASNPLYTAINKFRDEFEKHIDRKICSTLNC 318 >UniRef50_D1PFH3 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Prevotella copri DSM 18205 RepID=D1PFH3_9BACT Length = 450 Score = 204 bits (518), Expect = 8e-51, Method: Composition-based stats. Identities = 86/355 (24%), Positives = 132/355 (37%), Gaps = 55/355 (15%) Query: 40 KALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTY 99 +A L+P+EIVN++K AGL G GGAGF T +K P ++ N E EP Sbjct: 120 EAHAELTPEEIVNRIKVAGLTGMGGAGFPTFIKLCPPPGA---KAECVIINGVECEPYIT 176 Query: 100 KDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKN 159 D LM + ++ G+ + A + +GYI + A Sbjct: 177 ADYRLMMEHADEILVGLNLLMKAAQVEKGYIGIEDNKPAAIKLFEE-------------- 222 Query: 160 IMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNV 219 T D + + A +Y G E L++++ R+ P P GA V NV Sbjct: 223 --KTANDARIEIVPLAKKYPQGGEKQLVDAVIRRQVPAP--PAIPVNVGAI-----VQNV 273 Query: 220 ETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYA 278 T V YQ + K+K + +G+ VKNPG + + GT +++E+ Sbjct: 274 GTAFAV----------YQAVMKNKPLFERYTTVTGKQVKNPGNFLVRMGTPFSQMIENCG 323 Query: 279 GGMRDGLKFKA---------------WQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGT 323 G K A G LT+A I A + Sbjct: 324 GLPEGDNKVLAGGPMMGKAVISLDVPVTKGTNSITVLTDADAHRKKAQPCIRCAKC-VDA 382 Query: 324 ALAMAVDHEINMVSLVRNLEEFFARE--SCGWCTPCRDGLPWSVKILRALERGEG 376 + + +S+V++ E A E SC C C+ P IL + G+G Sbjct: 383 CPMGLEPYLLATLSVVKDYERLEAEEVTSCIACGSCQFTCPSHRPILDNIINGKG 437 >UniRef50_Q0TQI8 Electron transport complex, RnfABCDGE type, C subunit n=8 Tax=Clostridium perfringens RepID=Q0TQI8_CLOP1 Length = 436 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 72/355 (20%), Positives = 125/355 (35%), Gaps = 60/355 (16%) Query: 40 KALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTY 99 K + LS ++V VKD G+ G GGA F +K ++ E I+Y++ NA E EP Sbjct: 114 KYSSELSLKDVVKLVKDYGIVGLGGATFPCHVKLNV---KEDKEIKYIIINAAECEPYLT 170 Query: 100 KDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKN 159 D +M + ++ G+ I YI + + A + + E Sbjct: 171 CDHRVMLEYTEEIISGLRILLELFPKALIYIGIEDNKLNAIDKFKSILGE---------- 220 Query: 160 IMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNV 219 D ++ V +Y G E LI +L K P+ V NV Sbjct: 221 ------DNKIKVMPLKSKYPQGSEKHLIYALT--------KLQVPSGKLPLDIGCIVFNV 266 Query: 220 ETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYA 278 T+ Y ++ +++ +G +++P + GT ++I+E Sbjct: 267 STIYQ----------LYASLINGLPLTERIITVTGDSIRSPKNLRVKIGTPVKDIIEFCG 316 Query: 279 GGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIG----------------KAGSRLG 322 G + K GG LDLP+ + G + G L Sbjct: 317 GFINKPNKI---ILGGPMMG-TAINSLDLPITKGTSGILCLSKVDDFPKSHCIRCGKCLN 372 Query: 323 TALAMAVDHEINMVSLVRNLE--EFFARESCGWCTPCRDGLPWSVKILRALERGE 375 + + ++N ++L L+ EF C C C P + I+ + + Sbjct: 373 SCPMNLIPQKLNELALKDKLDEFEFLGGMDCLECGCCTFSCPAKISIVNNIRNAK 427 >UniRef50_Q8RIJ6 Nitrogen fixation iron-sulphur protein RNFC n=17 Tax=Bacteria RepID=Q8RIJ6_FUSNN Length = 441 Score = 201 bits (511), Expect = 5e-50, Method: Composition-based stats. Identities = 85/402 (21%), Positives = 145/402 (36%), Gaps = 72/402 (17%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 +T + +DK+ W + + +N E +KAL ++ +++ G+ G GGA F T +K Sbjct: 100 MTVFIENDKKEEWAELSKIENWEEADKKAL--------LDIIREKGIVGIGGATFPTHVK 151 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 + P + + L+ N E EP D LM + P +VEG+ I L Y+ + Sbjct: 152 LNPPPNTQ---LDSLILNGAECEPYLNSDNRLMLENPKSIVEGIKIIKKILNVPNVYVGI 208 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 EA ++R+A GTG + + +Y G E LI S+ Sbjct: 209 EDNKPEAIESMRKATE-------------GTG----INIVPLKTKYPQGGEKQLIKSILD 251 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGF 252 R+ P+ V N T + Y+ + K K++ Sbjct: 252 RQV--------PSGQLPSAVGVVVQNTGTAAAI----------YEAVVNGKPLIEKVVTV 293 Query: 253 SGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEF 311 SG+ +KNP ++ GT IL++ + + GG L E Sbjct: 294 SGKAIKNPKNVKVAIGTPFSYILDNCGINREEMARL---VMGGPMMG------LAQMTED 344 Query: 312 ESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRAL 371 ++ K S L ++L + ++C C+ C P + L Sbjct: 345 ATVIKGTSGL--------------LALTNEEMRPYKTKACISCSKCVSACPMGLAPLMFD 390 Query: 372 ERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIK 413 + + L + G CA+ A PL +IK Sbjct: 391 RLAAAKEYEEMAAHNLMDCIECGS--CAYICPANRPLAESIK 430 >UniRef50_A7BY78 Electron transport complex protein rnfC n=4 Tax=Gammaproteobacteria RepID=A7BY78_9GAMM Length = 446 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 91/415 (21%), Positives = 151/415 (36%), Gaps = 65/415 (15%) Query: 8 PETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGF 67 P HP +L+ + D Y ++ LS +E +N V+ AG+ G GGA F Sbjct: 92 PRRHP-GGQLQPAIEIE-ADPYATQRLESKPAIDWMALSIEEFINHVQKAGIVGMGGAAF 149 Query: 68 STGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYR 127 + +K++L + M I++L+ N E EP D LM + P L+ G+ I L A + Sbjct: 150 PSHVKYALP---DGMQIKHLVINGAECEPYLTNDHRLMLERPDTLLRGIEIVRQKLGATQ 206 Query: 128 GYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALI 187 I + +A L++ I + + + +Y G E +I Sbjct: 207 ATIGVELNKTDAINTLQKHIDQQQIK--------------NIRMVPLRVKYPQGAEKMMI 252 Query: 188 NSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGT 247 SL P P VNNV T+ + G+ + Sbjct: 253 KSLFNIEIPPGQLP--------RDVGVTVNNVSTIVAIADYFETGMPLIE---------- 294 Query: 248 KLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLD 306 +++ SG V+ P +P GT ARE+L + GG+++ ++ GG A LD Sbjct: 295 RIVTVSGPGVEQPANLMVPLGTPAREVL-RFCGGLKE--TTRSVIMGGPMMGM-PIASLD 350 Query: 307 LPMEFESIGKAGSRLGTALAMAV-DHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSV 365 +P+ G++ +A D E SC C C + P + Sbjct: 351 VPILK----------GSSGILAFTDEETGKPK----------EYSCIHCGRCVEACPHFL 390 Query: 366 KILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFE 420 R + + T L + G C + + P+ IK + E Sbjct: 391 NPSRLARLSKKRRYTEMTDYNLMDCVECGA--CTFSCPSGIPIVQLIKVAKTEIR 443 >UniRef50_D1N841 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N841_9BACT Length = 440 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 89/375 (23%), Positives = 134/375 (35%), Gaps = 64/375 (17%) Query: 49 EIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQL 108 E++ + DAGL G GGA F T +K S P I L+ N E EP D LM + Sbjct: 127 ELLKRTADAGLVGMGGAAFPTHVKLSPPP---DKTIDTLILNGAECEPYLTADHRLMLEQ 183 Query: 109 PHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFE 168 P ++EG ISA L YI + I+A L R AE F Sbjct: 184 PERVLEGAAISAKILNVKNVYIGVEANKIDAIEALGRRAAE-----------------FG 226 Query: 169 LFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAI 228 + V T +Y G E LI ++ GR+ P V NV T + Sbjct: 227 IKVATLKVQYPQGSEKQLIMAITGRKV--------PTGGLPMDAGCVVQNVGTAAAMTDA 278 Query: 229 LANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKF 287 + G+ + ++ +G VKNPG W L GT + +E G + K Sbjct: 279 VCRGIPLVE----------RVTTITGEVVKNPGNWLLKIGTPVIKAIEFAGGVTAEPGKL 328 Query: 288 KAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFA 347 GG F + ++P+ T+ + + E++M + Sbjct: 329 ---ILGGPMMGF-AQKSFEVPVAK----------NTSGILLLPVELSM---------NYG 365 Query: 348 RESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEP 407 C C C +G P ++ E + D+ + L G CA+ A P Sbjct: 366 STGCIRCGRCVEGCPMNLIPCLLGNAVEAERFDLAAQNHVMDCLECGS--CAYVCPAHRP 423 Query: 408 LQSAIKYFREEFEAG 422 L ++ + E Sbjct: 424 LVQHMRRAKAEIRKR 438 >UniRef50_C0WAW3 Electron transport complex protein n=1 Tax=Acidaminococcus sp. D21 RepID=C0WAW3_9FIRM Length = 447 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 78/372 (20%), Positives = 133/372 (35%), Gaps = 58/372 (15%) Query: 43 TGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDR 102 ++PD I +++ G G GGA F T +K++ PK+ + I +L N E EP D Sbjct: 111 EEITPDVIRTALREGGSVGLGGATFPTAVKYA-PPKEGARPIDTILLNGIECEPFITGDH 169 Query: 103 LLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMG 162 +M + +++G+ A A +G I + +A ++ +A Sbjct: 170 RIMLEWADEMIQGLKYFMMASGAQKGIIGIEDNKPDAIALVKEKVAS------------- 216 Query: 163 TGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETL 222 + + V A +Y G E LI + GR R PA G V+NV T Sbjct: 217 ---EPNIEVCVCAEKYPEGSEKHLIYAATGRTVPDRG---LPADVGVI-----VDNVGTA 265 Query: 223 CNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGM 281 ++ + Y+ ++ SG V PG + GT + +E AGG+ Sbjct: 266 VACYRMVKKNIPLYE----------RVTTISGDGVNKPGNYICRLGTLYSDAVELAAGGL 315 Query: 282 RDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRN 341 + + GG F T + LD P+ + + + E Sbjct: 316 KG--TPGKFISGGMMMGFSTPS-LDYPIAKW----------SGAVLIFNSESP------- 355 Query: 342 LEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHA 401 ++ C C C D P ++ ++ + Q + C + CA Sbjct: 356 FAQYVEPSPCVHCARCVDACPMKLEPTEIVQAVKRQNWEEAE-RFSCHACVECGS-CAFV 413 Query: 402 PGAVEPLQSAIK 413 A PL I+ Sbjct: 414 CPAHIPLVQYIR 425 >UniRef50_C7HT97 Na(+)-translocating NADH-quinone reductase, A subunit n=3 Tax=Anaerococcus RepID=C7HT97_9FIRM Length = 443 Score = 196 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 78/392 (19%), Positives = 148/392 (37%), Gaps = 65/392 (16%) Query: 24 VWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMN 83 + + Y + YE RK +T L+ ++IV +K+ GL G GGA F +K+S + Sbjct: 106 IDTEGYDQEINYE--RKDVTNLTKEKIVEAMKENGLVGMGGASFPAHIKYS-----PNKP 158 Query: 84 IRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNL 143 I ++ N E EP D +++ P ++V+ + + A+ A +G I + EA + Sbjct: 159 IDTVIINGAECEPYVTCDDFILKTKPEVIVDALELLVQAVDAKKGIIAIEDNKAEAIEKV 218 Query: 144 RRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPF 203 ++A+A +L V T +Y G+E +IN++ R Sbjct: 219 KKALA--------------NKNSSKLEVATMVTKYPQGDEKRIINAVLHREV-------- 256 Query: 204 PATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLW 262 P+ V+NV + V Y+ + K + M +G +KNP + Sbjct: 257 PSGGLPMDVGVIVSNVSSANAV----------YEAVYYGKPLIERYMTVTGHGIKNPSNF 306 Query: 263 ELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLG 322 + GT+ ++E+ G + K GG +++ P+E Sbjct: 307 LVRIGTSFDHMIEEAGGLTEEAGK---VINGGPMMGIAQP-NINQPVEKA---------- 352 Query: 323 TALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIE 382 + + ++ E + + C C C + P V ++ L + Sbjct: 353 SNCILVLNKEESKAPIT---------NPCIRCAKCVNVCP--VGLMPLLIHKFSLKEKFD 401 Query: 383 TLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKY 414 + L C++ + PL AI++ Sbjct: 402 KAQDLHILDCIECGSCSYICPSKRPLVEAIRF 433 >UniRef50_C4FA62 Putative uncharacterized protein n=2 Tax=Collinsella RepID=C4FA62_9ACTN Length = 447 Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats. Identities = 84/396 (21%), Positives = 144/396 (36%), Gaps = 66/396 (16%) Query: 36 EGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEME 95 + A K T + +E + V+D+G+ G GGA F T W M E + +L+ NA E E Sbjct: 107 DPALKPPTYSNKEEFIACVRDSGMVGLGGASFPT---WFKMRAPEGKSFEFLVVNAMECE 163 Query: 96 PGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGL 155 P D M + +++G+ + AL+ I + EA + L+R + E Sbjct: 164 PYITSDYRQMMEHSERVIDGVFRTIEALEIPAAVIGVEDNKPEAILELKRVVKE------ 217 Query: 156 LGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTC 215 G + + V +Y G E LI + GR PA Sbjct: 218 -------KGREDRIEVMEIPTKYPAGGEKVLIKATTGRDV--------PAGGLPIDVGCL 262 Query: 216 VNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREIL 274 V NV T+ V G+ K + +G + NPG + +P G + R+++ Sbjct: 263 VVNVTTISRVEQYFRYGMPL----------TCKTVTVTGDCIANPGNYRIPLGMSVRDVI 312 Query: 275 EDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEIN 334 E G +++ K GG T ++D P+ L A+ H+ Sbjct: 313 EATGGMVKEPKKI---IMGGPMMGR-TITNIDCPI-----------LKANNAIVALHDAA 357 Query: 335 MVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPG 394 ++ +C C C P +++ D+ L++L Sbjct: 358 VL---------PDETACIRCGRCVRACPLALEPFALDSASRSH--DVVALDELAVMNCME 406 Query: 395 KTFCAHAPGAVEPLQSAIKY----FREEFEAGIKQP 426 CA+ A + ++I+ +R E A + P Sbjct: 407 CGSCAYVCPAHRRITASIREGKAVYRGEV-ARLTAP 441 >UniRef50_A5N7M5 RnfC n=6 Tax=Clostridiales RepID=A5N7M5_CLOK5 Length = 452 Score = 194 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 79/400 (19%), Positives = 133/400 (33%), Gaps = 79/400 (19%) Query: 10 THP-----LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGG 64 HP LT + +D + W++ + LS +I++ +++AG+ G GG Sbjct: 86 PHPGFGKCLTIVIENDGKDEWIEGI-------PISRNWQDLSDKDIMSIIREAGIVGMGG 138 Query: 65 AGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALK 124 A F + +K S + + + N E EP D M + +V G+ I LK Sbjct: 139 ATFPSHVKLSPPA---DKKVEFFILNGAECEPYLTSDYRSMLEYTDRIVSGVKIIMKILK 195 Query: 125 AYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEET 184 A +G++ + +A + +A GTG + V +Y G E Sbjct: 196 AEQGFVGIEDNKKDAIEVMEKAFE-------------GTG----VQVVALPTKYPQGAEK 238 Query: 185 ALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKD 244 LI L GR P+ V NV T V + G+ Q ++ Sbjct: 239 MLIKVLTGREV--------PSGRLPMDVGAVVQNVGTCIAVSDAVEKGIPLIQRVTTLS- 289 Query: 245 AGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAH 304 G +K P L GTT + ++ G +K GG F +++ Sbjct: 290 --------GGALKEPKNLLLRIGTTFKYAVDLCGGFKETPVK---VVMGGPMMGF-AQSN 337 Query: 305 LDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPW- 363 L++P+ G + +++ +C C C + P Sbjct: 338 LEVPILK----------GVSGILSLSESD---------ANTGTETACIRCGRCFNACPMS 378 Query: 364 ----SVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCA 399 + IL D L+ C G C Sbjct: 379 LNPSMLSILGQNNLYREAKEDYNLLD--CVECGSCVYVCP 416 >UniRef50_B2A142 Electron transport complex, RnfABCDGE type, C subunit n=3 Tax=Clostridia RepID=B2A142_NATTJ Length = 441 Score = 194 bits (493), Expect = 6e-48, Method: Composition-based stats. Identities = 82/411 (19%), Positives = 133/411 (32%), Gaps = 76/411 (18%) Query: 10 THPL-----TWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGG 64 THP+ T + +D + +Y G + ++ DEI +V AG+ G GG Sbjct: 86 THPIGEKANTIIIENDGKDEL--DYEESEGLDSP----DNITADEIKEKVNAAGIIGMGG 139 Query: 65 AGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALK 124 A F T +K S D+ I ++ N E EP D +M + ++ G+ A+ Sbjct: 140 AAFPTHIKISP---DKEKPIDTVILNGAECEPYLTTDYRMMLEAEDYVLFGLRAIMKAVN 196 Query: 125 AYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEET 184 G I + +A ++ +A+ D L V +Y G E Sbjct: 197 CENGVIAIENNKPQAIEKMQNIVAD----------------DDRLQVMIFESKYPQGAEK 240 Query: 185 ALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKD 244 LI ++ GR P+ VNNV T + + Y+ + Sbjct: 241 QLIKTVTGREV--------PSGGLPMDVGCIVNNVGTAVAIAEAIKLNKPSYERVMTVTG 292 Query: 245 AGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAH 304 G + PG + + GT A I+ + G + K GG Sbjct: 293 PG---------INRPGNFLVRIGTLASHIISECGGAKENTKK---VIMGGPMMGLSQP-- 338 Query: 305 LDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPW- 363 +EF I GT+ + + + V + F + C C C D P Sbjct: 339 ---TVEFPVIK------GTSGILLL--TGSEVKV-------FEEKPCINCGRCVDDCPAY 380 Query: 364 -SVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIK 413 ++ + C G C A PL I+ Sbjct: 381 LLPNVIAHYMENGRVNESEDYNAMDCIECGCCTYICP----ANRPLVHYIR 427 >UniRef50_B9BGV0 NAD-dependent formate dehydrogenase beta subunit (Fragment) n=1 Tax=Burkholderia multivorans CGD1 RepID=B9BGV0_9BURK Length = 281 Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 72/179 (40%), Positives = 101/179 (56%) Query: 177 RYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWY 236 Y+CGEETAL+ SLEG+R R+KPP PA +G +G+PT +NNV TL P I A G +Y Sbjct: 103 AYVCGEETALLESLEGKRGVVRAKPPLPALAGLFGQPTVINNVITLATAPVIFARGAAFY 162 Query: 237 QNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAG 296 ++ + GT +G ++ GL EL FG T RE+L D+ GG G +A Q GG Sbjct: 163 RDYGMGRSRGTLPFQLAGNIRYGGLVELAFGVTLRELLFDFGGGTATGRPARAAQVGGPL 222 Query: 297 TDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCT 355 +L E D+P+++E+ G+ +G + D N+ L +F A ESCG CT Sbjct: 223 GTYLPEHQWDVPLDYEAYTAIGAVVGHGGIVLHDDTSNLAELAEYAMKFCAIESCGKCT 281 >UniRef50_A8SLB1 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SLB1_9FIRM Length = 444 Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats. Identities = 81/382 (21%), Positives = 140/382 (36%), Gaps = 65/382 (17%) Query: 34 GYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADE 93 GYE + +S +I++ +K+AG+ G GGAGF T +K + E Y++ N E Sbjct: 111 GYEEKNLTIDEVSATDIIDAIKEAGIVGLGGAGFPTHVKLT---AREGQITDYIIINCAE 167 Query: 94 MEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEA 153 EP D+L+ME P +V G+L++ A+ A +G + + A L+ A Sbjct: 168 CEPYLTSDQLMMELYPEKVVMGLLLAMKAMGAKKGILGIEDNKPLAIDKLKEA------- 220 Query: 154 GLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKP 213 + E+ V +Y G++ LI + G P+ + Sbjct: 221 ---------SKSYPEVTVSVVKTKYPQGDQKRLIQATTGVVV--------PSGASTSAVG 263 Query: 214 TCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTARE 272 V N T + + +G Y+ KL+ +G +K P + G+ + Sbjct: 264 IRVVNANTAIAINDAVLHGKPLYE----------KLVTMTGHALKEPQNVMVRVGSKVSD 313 Query: 273 ILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHE 332 I+E G + K GG ++ G +G + + E Sbjct: 314 IVEFIGGYSSEPGKI---ISGGPMMG---------ETQYTPNVTTGKAMG--GLLFMTQE 359 Query: 333 INMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILR-ALERGEGQPGDIETLEQLCRFL 391 + V C C C D P ++ L L + + G+ E L L + Sbjct: 360 ESAPKAV---------SPCIRCGRCVDICPVYLQPLYLQLYTLKNRVGEAEKLH-LMDCI 409 Query: 392 GPGKTFCAHAPGAVEPLQSAIK 413 G C++ + PL I+ Sbjct: 410 ECGS--CSYICPSNRPLVETIR 429 >UniRef50_B0S407 Electron transport complex protein n=2 Tax=Finegoldia magna RepID=B0S407_FINM2 Length = 442 Score = 191 bits (484), Expect = 7e-47, Method: Composition-based stats. Identities = 79/380 (20%), Positives = 141/380 (37%), Gaps = 63/380 (16%) Query: 34 GYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADE 93 GY T LS + I+ ++K+AG+ G GGAGF T LK + K + I ++ N E Sbjct: 110 GYTETNDDFTQLSKEVILERIKEAGIVGLGGAGFPTHLKMN---KKPDVKIEQVILNGAE 166 Query: 94 MEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEA 153 EP D+L ME P + G+ I + +GYI + +A L+ A + Sbjct: 167 CEPYLTSDQLNMELYPQKAIGGLKIIMKLMDCDKGYIGVEDNKQKAIGILKNAAKDEKN- 225 Query: 154 GLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKP 213 + + + +Y G+E LIN++ G++ SK G G Sbjct: 226 ---------------ISICSVKTKYPQGDERRLINAITGKKI---SKAQRSNERGVQGL- 266 Query: 214 TCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSG-RVKNPGLWELPFGTTARE 272 N+ + + Y + S +++ +G +K P +P GT ++ Sbjct: 267 ----NISSAMAI----------YDAVVHSIPLTHRIVTMTGSAIKEPKNIYVPVGTKFKD 312 Query: 273 ILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHE 332 +++ G K GG +E ++ T + ++ + Sbjct: 313 LVDYCDGFKETPYKI---VVGGPMMGA-----CQYNLEAPTVKT------TGGIICMNEK 358 Query: 333 INMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLG 392 ++ + E C C C D P + +L + + GD E E++ Sbjct: 359 DATLA---------SPEPCIKCAKCVDVCP--IGLLPLFLQLKSLNGDFEGAEKMHLNDC 407 Query: 393 PGKTFCAHAPGAVEPLQSAI 412 C++ + PL AI Sbjct: 408 IECGTCSYICPSNRPLVEAI 427 >UniRef50_B2A1V2 Electron transport complex, RnfABCDGE type, C subunit n=2 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A1V2_NATTJ Length = 440 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 71/349 (20%), Positives = 125/349 (35%), Gaps = 59/349 (16%) Query: 45 LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLL 104 LS +E+ +KD+G+ G GGA F T + + +S I YLL N E EP D Sbjct: 119 LSDEELKELLKDSGIAGMGGAAFPTYVNVN-----QSQPIEYLLLNGAECEPYLTCDHRQ 173 Query: 105 MEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTG 164 M ++P L++G I + A + YI + +A L E Sbjct: 174 MIEMPEKLIKGAEILMRIIGAKKCYIGIETNKPDAIEVLSEQTKELEN------------ 221 Query: 165 FDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCN 224 + V A +Y G ++ LIN++ R+ + A G V NV T Sbjct: 222 ----MEVVPLASKYPQGYKSHLINAITDRKVP---RGARSAELG-----CIVRNVGTTIA 269 Query: 225 VPAILANGVEWYQNISKSKDAGTKLMGFSG-RVKNPGLWELPFGTTAREILEDY------ 277 V Y+ + K +++ SG ++ PG + + GT ILE Sbjct: 270 V----------YEAVVYEKPLIERVVTVSGPKIPQPGNFSIRIGTPISHILEQCEIEDIS 319 Query: 278 --------AGGMRDG---LKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALA 326 GG G +A + + + ++ + K G + Sbjct: 320 TLEGCKVILGGPMTGMSQYSVQAPIVKNSTGLLVFPPEMLPEWDYHNCVKCGDCVAHCPM 379 Query: 327 MAVDHEINMVSLVRNL--EEFFARESCGWCTPCRDGLPWSVKILRALER 373 +++++ + E + C C C P + I++ +++ Sbjct: 380 YLYPNKLSIFAEAEMYREAEDWDIMDCIECGLCVYQCPSNRPIVQFIKQ 428 >UniRef50_A1WTR7 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Halorhodospira halophila SL1 RepID=A1WTR7_HALHL Length = 506 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 91/427 (21%), Positives = 130/427 (30%), Gaps = 76/427 (17%) Query: 1 MKNIIRTPETHP-----LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVK 55 + + R P HP T L D + W + E + P I +V Sbjct: 83 VVAVDRHPAPHPSGLTVPTVVLDPDGEEQWSETLP-----EPLTAPARQIDPATIAARVG 137 Query: 56 DAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEG 115 +AG+ G GGA F +K + L+ N E EP D LM + +++G Sbjct: 138 EAGIVGMGGAAFPAAVKL-----GAGQPVATLILNGGECEPYLTCDDRLMRERAAGIIDG 192 Query: 116 MLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGA 175 + A AL A R I + EA LRRA L G + V Sbjct: 193 AQLMARALGAERTAIGVEDNKPEAIHALRRA-----SDALGGPD-----------VVPVP 236 Query: 176 GRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEW 235 + G E LI +L GR PA + A V+NV T V +G Sbjct: 237 SLWPQGSEKHLIYTLTGREV--------PAGARAGDIGVVVHNVGTAYAVHRAARHG--- 285 Query: 236 YQNISKSKDAGTKLMGF-SGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGG 294 + ++ + G V PG +E P G + ++E G + GG Sbjct: 286 -------RPLISRPVTVGGGAVAEPGNFEAPLGLPLQALIEQAGGLREPPAR---VLAGG 335 Query: 295 AGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWC 354 + A GT +A+ C C Sbjct: 336 PMMGQVAPLE------------AAVAKGTNGVIAL---------TATEIREAEGRPCIRC 374 Query: 355 TPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKY 414 C D P + R D L L G CA+ + PL Y Sbjct: 375 GRCVDACPMGLMPFDIANRAAAGDVDGAAATGLMDCLTCGS--CAYVCPSARPLVQLFHY 432 Query: 415 FREEFEA 421 R + Sbjct: 433 ARGQLAE 439 >UniRef50_C9A8J9 Respiratory-chain NADH dehydrogenase 51 kDa subunit n=3 Tax=Enterococcus casseliflavus RepID=C9A8J9_ENTCA Length = 445 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 73/366 (19%), Positives = 128/366 (34%), Gaps = 64/366 (17%) Query: 48 DEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQ 107 + I+ +++ G+ G+GGA F T +K+S+ DE+ I L+ N E EP D LM++ Sbjct: 125 ETILKKIRQGGIAGKGGATFPTHVKFSI---DENKKIHTLILNGSECEPFLRSDAFLMQK 181 Query: 108 LPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDF 167 +++G I+ L + I + + A ++ A AE D Sbjct: 182 EAKKIIQGAKIAQKLLADPKIIIGIEDDKPLAISAMQAASAE----------------DD 225 Query: 168 ELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPA 227 + V T Y G E L+ L + P + NV T + Sbjct: 226 TIEVVTVPTVYPTGGEKQLVELLTDQEV--------PLGGLTADIGIVLINVATSFAIA- 276 Query: 228 ILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKF 287 + + K + +G V++P + + P GT A E+++ G K Sbjct: 277 ---------EAVCYDKPLIERYTTVTGDVQHPRIVKNPLGTLAGELIDFAGGFQGAPSKL 327 Query: 288 KAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFA 347 GG + L +P+ G+ + + E + +A Sbjct: 328 ---ILGGPMMGKSVK-TLKVPVTK----------GSNGIVVFNEETD---------WLYA 364 Query: 348 RESCGWCTPCRDGLPWSVKILRALERGE-GQPGDIETLEQLCRFLGPGKTFCAHAPGAVE 406 C C C + P +L +E + + GD + E+L C A Sbjct: 365 ENPCIRCNKCVEACPM---LLMPMEIDQFYRAGDYQKCEELLAEACINCGACTFVCPAKR 421 Query: 407 PLQSAI 412 L + I Sbjct: 422 SLAANI 427 >UniRef50_Q0PIB6 Ethanolamine utilization Fe-S center protein eut n=1 Tax=Heliobacillus mobilis RepID=Q0PIB6_HELMO Length = 444 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 87/396 (21%), Positives = 147/396 (37%), Gaps = 70/396 (17%) Query: 47 PDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLME 106 ++IV VK+AG+ G GGAGF T +K + + ++ N E EP + LM Sbjct: 2 REKIVKAVKEAGVVGAGGAGFPTHIKMN-------ASADIIIANGAECEPLLRSHQHLMA 54 Query: 107 QLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFD 166 +V G++ A A + YI L+ +Y A L ++I + Sbjct: 55 AESDRVVLGLIAVMLATGAQKSYIGLKKKYSVAIEALEQSIERHAKG------------- 101 Query: 167 FELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVP 226 + + Y G+E L+ + G+ P V NVETL N+ Sbjct: 102 -RVELFILPDFYPAGDEQVLVYEVTGK--------IIPEGGIPLHVGVVVINVETLVNIT 152 Query: 227 AILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLK 286 L TK + +G V+ P ++P G R ++E G + + Sbjct: 153 KAL-----------DGVPVMTKYVTVTGAVRQPVTLKVPIGIPIRLLIEAAGGAIVNDY- 200 Query: 287 FKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVS---LVRNLE 343 A GG + +D P+ T + + + ++++ L + Sbjct: 201 --ALIDGGPMMGRIV--EVDSPVTKT----------TGGIIVLPKDHSLIAGKTLPWSAI 246 Query: 344 EFFARESCGWCTPCRDGLPWSV--------KILRALERGEGQPGDIETLEQLCRFLGPGK 395 ++ C C C D P + +I++A+ G GD T LC G Sbjct: 247 ANRSKSVCCACRACTDCCPRHLLGHSLEPHRIMQAIGNGTSYQGDAITRAFLCSECGACD 306 Query: 396 TF-CAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNT 430 TF C+ + P + ++ R+ AGIK P+ N Sbjct: 307 TFGCSMG---LSPRRVNMELKRQLSAAGIKNPYHNQ 339 >UniRef50_Q603B2 Electron transport complex, C subunit n=1 Tax=Methylococcus capsulatus RepID=Q603B2_METCA Length = 523 Score = 188 bits (477), Expect = 4e-46, Method: Composition-based stats. Identities = 83/400 (20%), Positives = 135/400 (33%), Gaps = 65/400 (16%) Query: 1 MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEG-ARKALTGLSPDEIVNQVKDAGL 59 + I P HP + +D +E A L+PDE+ + +AG+ Sbjct: 81 VSAIEPRPLPHPSGLADL----AIVIDTDGEDLAFETEAHPDYQRLAPDELRRIIFEAGI 136 Query: 60 KGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLIS 119 G GGA F T +K + I L+ N E EP D L+ P ++EG I Sbjct: 137 VGLGGAAFPTAVKTDPGHRA----IDTLILNGAECEPYITCDDSLLRHFPREVLEGARIL 192 Query: 120 AFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYI 179 L R + + + EA LR I TG ++ V T Y Sbjct: 193 MRVLGVERCLLGIEDDMPEAIRALRE--------------IQETGEYQDIDVITVPALYP 238 Query: 180 CGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNI 239 G E LI L GR R PA +G NV T V Y+ + Sbjct: 239 SGGEKQLIRILTGREVPTRG---IPADAGV-----VCQNVGTAAAV----------YRAV 280 Query: 240 SKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTD 298 + + +++ +G+ ++NPG W GT +++ G + GG Sbjct: 281 VRGEPLIERIVTVTGKGIRNPGNWLTRIGTPIADLVRYSGGYSGAAERL---ILGGPMMG 337 Query: 299 F-LTEAHLDLPMEFESIGKAGSRLGTALAMAVD-------HEINMVSLVRNLEEFFARE- 349 L+ L L + G T A+ E+ ++L+ +++R Sbjct: 338 ISLSSDALPLVKAANCVLVTGRGETTGPKQALPCIRCGACAEVCPINLLPQQLYWYSRAD 397 Query: 350 -----------SCGWCTPCRDGLPWSVKILRALERGEGQP 378 C C C P + +++ + + Sbjct: 398 NLRRVEEYHVTDCIECGCCDYVCPSHIPLVQYFRAAKSEL 437 >UniRef50_B5JW06 EleCtron transport complex, rnfabcdge type, c subunit n=2 Tax=Gammaproteobacteria RepID=B5JW06_9GAMM Length = 792 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 76/417 (18%), Positives = 143/417 (34%), Gaps = 73/417 (17%) Query: 8 PETHPLTWR-----LRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGR 62 P HP + D + W++ + Y T L P + N++++AG+ G Sbjct: 76 PVPHPSGLTAPCLVIEPDGKDEWIE-LKPVADY-------TQLDPISLRNRIREAGIVGL 127 Query: 63 GGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFA 122 GGA F + +K + P S I L+ N E EP D+ LM + +V+G+ I+ A Sbjct: 128 GGAAFPSAVKLNPGP---SRKIHTLVINGAECEPYITCDQTLMSERADQVVQGIQIAMHA 184 Query: 123 LKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGE 182 L R +I + A L +AIA+ D ++ + Y G Sbjct: 185 LGVERCWIAIEDSMPTAHEGLSQAIAQCG--------------DTKIEIKVVPTIYPTGG 230 Query: 183 ETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKS 242 E L+ L G+ P+ G +N T+ V Y+ I+ Sbjct: 231 EKQLLKVLTGQEVPSNG---LPSEIGV-----VCHNPGTI----------VAMYRAIAFG 272 Query: 243 KDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDF-L 300 + ++++ +G+ + +P E FGT ++ + G + + GG F L Sbjct: 273 EPLISRIVTITGQGIASPRNIEALFGTPIAHLVAEAGGYQKGVERL---IMGGPMMGFAL 329 Query: 301 TEAHLDLPMEFESIGKAGSR----LGT---ALAMAVDHEINMVSLVRNLEEFFARE---- 349 L + I + G + + L+ ++++ Sbjct: 330 HTDELPIVKATNCILAGQAGEIADPGHADPCIRCGACADACPADLLPQQLYWYSKSREFE 389 Query: 350 ---------SCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTF 397 C C C P + +++ + + + E ++ F Sbjct: 390 RAQDEYNLFDCIECGCCSYVCPSHIPLVQYYRFAKTEIRNAEVEKRKAEHAKERHDF 446 >UniRef50_A1WT48 Electron transport complex, RnfABCDGE type, C subunit n=3 Tax=Proteobacteria RepID=A1WT48_HALHL Length = 448 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 82/416 (19%), Positives = 144/416 (34%), Gaps = 69/416 (16%) Query: 1 MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLK 60 + R P+T + R V + L LS +E+V ++DAG+ Sbjct: 91 LMPTARGPKTEAILLRTAPGDSQVV---------RWSRERTLEALSGEELVEAIRDAGIV 141 Query: 61 GRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISA 120 G+GGA F T LK+++ E + L+ N E EP D LM + +++G+ ++ Sbjct: 142 GQGGASFPTHLKFAVP---EGYTVDTLVVNGCECEPFLSADHRLMVEATDSIIDGVRLAM 198 Query: 121 FALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYIC 180 A+ A I + +A +A + G++ + V +Y Sbjct: 199 RAVGAPEAVIGVEDNKPDAVAA--------LQAAVAGEDA--------IRVVQLKSKYPQ 242 Query: 181 GEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNIS 240 G E LI +L R P+ + VNN+ T+ + +L G + + Sbjct: 243 GSEKMLIKALLDREV--------PSGGLPYEIGAVVNNIGTMAQLGYLLPRGEGLIERVI 294 Query: 241 KSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFL 300 G V+ PG + +P GT R +LE+ +G GG Sbjct: 295 TVAGPG---------VERPGNYRVPVGTPLRYLLEEVG---FEGDDPSRIILGGPMMGN- 341 Query: 301 TEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDG 360 T A LD+P+ G + + + + E + C C C + Sbjct: 342 TVAFLDVPITK----------GVSGVLVLPEG------AGDESEQPPTQPCIRCGRCVEV 385 Query: 361 LPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFR 416 P + + + C++ + PL ++YFR Sbjct: 386 CPVGLNPAELGRLAAKRQYAVMEERFHLNDCFEC-GCCSYVCPSNIPL---VQYFR 437 >UniRef50_B6BWH5 Electron transport complex protein RnfC n=2 Tax=Betaproteobacteria RepID=B6BWH5_9PROT Length = 503 Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 79/403 (19%), Positives = 150/403 (37%), Gaps = 67/403 (16%) Query: 23 PVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESM 82 + ++ + R + LS + + ++K +G+ G GGA F T +K + S Sbjct: 102 CIAIETDGKDEWIKRNRIDPSNLSSEALYEKMKSSGIVGLGGATFPTHIKLN------SN 155 Query: 83 NIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVN 142 I+ L+ NA E EP D + M++ +EG+ I+ LK I + +A Sbjct: 156 KIKTLIVNAAECEPYITCDDMAMQEKTKEFIEGIQITMDILKIPHAIIGIEDNKPKAIEK 215 Query: 143 LRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPP 202 L+ + ++ + + Y G+E LI + G + SK Sbjct: 216 LKTVLNKSKN----------------ISIKVVPTVYPSGDEKRLIYLMLGLKI---SKEK 256 Query: 203 FPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLW 262 P G V NV TL ++ G +Y + + ++++ +G +K P + Sbjct: 257 RPVDFGIQ-----VFNVATLISI------GRFFYHS----EPVISRIVTVTGALKRPNNY 301 Query: 263 ELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLG 322 E GT +E+++D G + GG F LP S+ KA Sbjct: 302 EALIGTPIQELIKDAGG-----KSDQEIIMGGPMMGF------KLPHTDVSVTKA----- 345 Query: 323 TALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIE 382 ++ + + +++ + F C CT C + P ++ + L + E Sbjct: 346 ------MNCLLAITDEMKSKDTF--EMPCIRCTKCVEVCPAQLQ-PQELYW-HAKSKQFE 395 Query: 383 TLEQLCRFL-GPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIK 424 L + + C++ + PL +Y + E +K Sbjct: 396 KLTEDYKLFDCIECGCCSYVCPSNIPLVQYYRYAKSEIRDQLK 438 >UniRef50_Q1N6T4 Electron transport complex protein RnfC n=1 Tax=Bermanella marisrubri RepID=Q1N6T4_9GAMM Length = 727 Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 79/408 (19%), Positives = 133/408 (32%), Gaps = 73/408 (17%) Query: 17 LRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLM 76 + D + W++ ++G L D +++ ++ +G+ G GGA F T +K Sbjct: 106 IETDGKDTWIE-------HKGLDNPLET-DRDTLIDIIQQSGITGLGGASFPTHVK---- 153 Query: 77 PKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEY 136 I L+ NA E EP D +LM LV+G+ + + + I + Sbjct: 154 TCVPEERIDTLILNAAECEPYITADDMLMRSYADGLVKGIELLFHLYQPEKCLIGIEDNK 213 Query: 137 IEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRAN 196 EA L++A+ T+ ++ V T +Y G E LI L G+ Sbjct: 214 PEAIEALQKALDATTDDTH------------KIHVVTIPTKYPSGGEKQLIQILTGKEVP 261 Query: 197 PRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSG-R 255 PA G NV T + Y+ I K ++ +G Sbjct: 262 ANG---LPADIGV-----ACQNVGTAYAI----------YEAIYLGKPLIKRITTVTGEA 303 Query: 256 VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIG 315 N +E GT +LE G D K GG F Sbjct: 304 ANNKANFETLLGTPVHHLLEQ---GETDFDKVHRLIMGGPMMGF---------------- 344 Query: 316 KAGSRLGTALAMAVDHEINMVSLVRN-LEEFFARESCGWCTPCRDGLPW--SVKILRALE 372 L T V +++ N L + + C C C + P + L Sbjct: 345 ----TLQTDEVPVVKSTNCIIASTANELPDPAMEQPCIRCGMCTEACPAQLLPQQLYWFS 400 Query: 373 RGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFE 420 + + + + G CA+ + PL ++ + E + Sbjct: 401 KSSNLEQAEQ--HNIADCIECGA--CAYVCPSNIPLVQYYRHTKGEIK 444 >UniRef50_A1TZ63 Electron transport complex, RnfABCDGE type, C subunit n=9 Tax=Gammaproteobacteria RepID=A1TZ63_MARAV Length = 609 Score = 184 bits (467), Expect = 6e-45, Method: Composition-based stats. Identities = 81/432 (18%), Positives = 145/432 (33%), Gaps = 88/432 (20%) Query: 1 MKNIIRTPETHPLTWR-----LRDDKQPVW-----LDEYRSKNGYEGARKALTGLSPDEI 50 ++ I + P HP L+ D + W +D+Y L + + Sbjct: 81 IEAIEQRPVPHPSGMADWCVVLKPDGEDQWCALSPIDDY-------------KQLDREAV 127 Query: 51 VNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPH 110 + ++++AG+ G GGAGF T +K + L+ N E EP D + M + Sbjct: 128 LQRIREAGISGMGGAGFPTDIKLRPPR---DRKVDTLILNGAECEPYITADDMTMREQAA 184 Query: 111 LLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELF 170 +V G+ + A+ L+ R + + EA +R+A+A ++ Sbjct: 185 EVVAGLKVMAWILRPSRCVVGIEDNKPEAIAAMRKAVA-----------------GTQIE 227 Query: 171 VHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILA 230 + +Y G E LI L G+ PA G N+ T V + Sbjct: 228 IAVVPTKYPSGGEKQLIQILTGQEVPSGG---IPADIGVM-----CQNIGTAVAVGRAVF 279 Query: 231 NGVEWYQNISKSKDAGTKLMGFSG-RVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKA 289 G K ++++ +G V+ PG +E+ GT +LE + + Sbjct: 280 EG----------KPLISRVVTVTGEAVREPGNFEVLIGTPIHHLLETAG---MAQERLER 326 Query: 290 WQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSL-VRNLEEFFAR 348 GG + L T V +++ L Sbjct: 327 LILGGPMMGY--------------------TLTTDSVPVVKTTNCVIAATAAELPAPPPE 366 Query: 349 ESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPL 408 + C C C + P ++L + G+ E E L F C++ + PL Sbjct: 367 QPCIRCGQCAEACPM--ELLPQQLFWYSKAGEFEKAEHLNLFDCIECGACSYVCPSSIPL 424 Query: 409 QSAIKYFREEFE 420 ++ + E Sbjct: 425 VQYYRFAKGEIR 436 >UniRef50_D1B8H6 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B8H6_THEAS Length = 445 Score = 184 bits (466), Expect = 7e-45, Method: Composition-based stats. Identities = 74/372 (19%), Positives = 125/372 (33%), Gaps = 62/372 (16%) Query: 37 GARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEP 96 R L DEI +++AG+ G GGA F T +K + P + +++ N E EP Sbjct: 112 SPRPDWEDLPADEIRRIIREAGIVGMGGACFPTAVKLTPPP---DKKVDHVIINGAECEP 168 Query: 97 GTYKDRLLMEQLPHLLVEGMLISAFAL-KAYRGYIFLRGEYIEAAVNLRRAIAEATEAGL 155 D LM + ++ G+ I+ + +G + L +A +R + Sbjct: 169 YLTCDDRLMRERGDRVLLGLQIALKLFPQGVKGVVALEDNKPKAIEAMRGYLDRLAIQ-- 226 Query: 156 LGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTC 215 + V +Y G E LI ++ GR PA G Sbjct: 227 ------------NVTVQPVRTKYPQGAEKMLIYAVTGREVPAGG---LPADVG-----CI 266 Query: 216 VNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREIL 274 + NV T + + + +++ SG +K P + G + RE++ Sbjct: 267 ILNVRTAYAI----------WDAVVNRMPVIDRIVTVSGDAIKEPKNLGVRLGMSVRELI 316 Query: 275 EDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEIN 334 E G + LK GG + + L++P+ GT+ +A Sbjct: 317 EACGGFSVEPLK---VIMGGPMMG-VALSDLNVPVVK----------GTSGILAFSE--- 359 Query: 335 MVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPG 394 L E+C C C P +L E + + E+L Sbjct: 360 ------ALARLGEEENCIRCGKCVSTCPM--GLLPYQLNAEVLRRNYDEFERLGGMNCIE 411 Query: 395 KTFCAHAPGAVE 406 CA+A A Sbjct: 412 CGCCAYACPARR 423 >UniRef50_Q5LC48 Electron transport complex protein n=41 Tax=Bacteria RepID=Q5LC48_BACFN Length = 445 Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 74/382 (19%), Positives = 138/382 (36%), Gaps = 63/382 (16%) Query: 44 GLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRL 103 L+ +EIV ++ DAG+ G GGA F T +K P S ++ NA E EP D Sbjct: 120 ELTSEEIVKKIADAGIVGLGGACFPTQVKLCPPP---SFKAECVIINAVECEPYLTADHQ 176 Query: 104 LMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGT 163 LM + ++ G+ I A+K + +I + +A + + +A + Sbjct: 177 LMLEHAEEVMVGVAILMKAVKVNKAFIGIENNKPDAIQLMTK-VASSYAG---------- 225 Query: 164 GFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLC 223 + V +Y G E LI+++ R+ + P V NV T Sbjct: 226 -----IEVVPLKVKYPQGGEKQLIDAITKRQVASGALP--------ISTGAVVQNVGTAF 272 Query: 224 NVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMR 282 V YQ + K+K +++ +G+ V P + GT +++++ G Sbjct: 273 AV----------YQAVQKNKPLFERVITVTGKSVAQPSNFLARIGTPMQQLIDACGGLPE 322 Query: 283 DGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNL 342 D K G + +A ++ + + G++ + ++ + V+N Sbjct: 323 DTGKIIG------GGPMMGKALVNTDVP--------TAKGSSGILIMNRKEAKRGEVQN- 367 Query: 343 EEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAP 402 C C C P ++ E + E++ + G C Sbjct: 368 --------CIRCAKCVSACPMGLEPYLLSALAENTEFERMESERIMDCIECGS--CQFTC 417 Query: 403 GAVEPLQSAIKYFREEFEAGIK 424 A PL + + + A I+ Sbjct: 418 PANRPLLDYCRLGKGKVGAMIR 439 >UniRef50_B0VFP0 Electron transport complex protein rnfC, NAD and 4Fe-4S binding subunit (RnfC) n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFP0_9BACT Length = 439 Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 73/393 (18%), Positives = 126/393 (32%), Gaps = 71/393 (18%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 + ++ D W++ N L +E+ ++ +AG+ G GGAGF T +K Sbjct: 97 MAIQITGDGSDKWIELVDEPN--------FMDLPLEEMKKRIGEAGICGMGGAGFPTLVK 148 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 S I ++ N E EP D LM + ++ G+ + L A +G I + Sbjct: 149 LSPPA---DKPIDTVILNGVECEPYLTSDHRLMLEKGEEIIIGLKLIMKILSAKKGMIGI 205 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 +A ++ T + + V RY G E LI + Sbjct: 206 EANKPDAIAKMQE----------------LTKNEPHIEVVPLKLRYPQGAEKQLIYAATK 249 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGF 252 R+ PA V NV T + Y+ I K +++ Sbjct: 250 RKV--------PAGGLPLEVGIVVQNVGTAFAI----------YEAIRYQKPLIQRVITV 291 Query: 253 SG-RVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEF 311 +G V P GT E++ D+ GG ++ + GG F Sbjct: 292 TGSPVTKPQNLLARIGTPFSELV-DFCGGTKE--EVGKVICGGPMMGFALPTL------- 341 Query: 312 ESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRAL 371 +A G+ + ++ E +C C C D P ++ + Sbjct: 342 ----EATVGKGSGGLVLMNTED---------ARLNEEGNCLRCARCVDVCPLNLVPCMIV 388 Query: 372 ERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGA 404 + + L + G CA+ A Sbjct: 389 SAVKYDNQKLAVRSGLNDCMKCGA--CAYVCPA 419 >UniRef50_A3DI53 Electron transport complex, RnfABCDGE type, C subunit n=4 Tax=Clostridium RepID=A3DI53_CLOTH Length = 439 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 85/380 (22%), Positives = 130/380 (34%), Gaps = 67/380 (17%) Query: 35 YEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEM 94 YEG K + + E ++ ++++GL G GGAGF +K S P I L+ NA E Sbjct: 108 YEGI-KPPSFSNSKEFISAIRESGLVGLGGAGFPAHVKLSPPP---DKKIDTLIINAAEC 163 Query: 95 EPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAG 154 EP D + + +V G+ I L I + EA + R A Sbjct: 164 EPYITSDYREIIENSWNVVSGINIIMEILGIENVLIGIEDNKPEAIKEMTRVAAT----- 218 Query: 155 LLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPT 214 D + V RY G E LI + GR+ P PA G Sbjct: 219 -----------DDRINVIKLKSRYPQGAEKMLIYATTGRKVPPGK---LPADVGVI---- 260 Query: 215 CVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREI 273 V NV ++ + + G+ + K + G VK PG E+ GT E Sbjct: 261 -VMNVNSVSFISEYIKTGMPLIK----------KRVTVDGPSVKRPGNVEVLIGTPISE- 308 Query: 274 LEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEI 333 + + GG G+ K GG + + LD P+ T +A D Sbjct: 309 VFSFCGGF--GIVPKKILMGGPMMG-IAQYTLDTPVLKH----------TNALLAFDETT 355 Query: 334 NMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERG-EGQPGDIETLEQL-CRFL 391 ++ ++C C C P ++ L G ++ + C Sbjct: 356 AVL---------PKEQACIRCGRCVRACPMNLLPLYLNNNSIRGNIEELNRYHVMDCIEC 406 Query: 392 GPGKTFCAHAPGAVEPLQSA 411 G C P + +QS Sbjct: 407 GSCAYVC---PAKINLVQSI 423 >UniRef50_Q73PG1 Na(+)-translocating NADH-quinone reductase, A subunit n=2 Tax=Treponema RepID=Q73PG1_TREDE Length = 480 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 83/390 (21%), Positives = 144/390 (36%), Gaps = 59/390 (15%) Query: 9 ETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFS 68 E H +T + + +DE + + T + +E + +V+DAG+ G GGA F Sbjct: 84 EPHLVTGNTENLCFLIEIDEENRE-EFMPPLDPFT-CTKEEALKRVRDAGITGMGGASFP 141 Query: 69 TGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRG 128 T +K S P I Y++ N E EP D + +V+G+ I+ + A +G Sbjct: 142 THVKLSPPP---DAKIEYVIANGAECEPYLCTDAATIFSDSDSIVDGLAITMRIVGAKQG 198 Query: 129 YIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALIN 188 I L + L +AI++ N + G +++ V +Y G E L + Sbjct: 199 IIALEDNKKDLVPVLEKAISKIK------ANPIAAG-AYDISVQLCKTKYPQGGEKTLTD 251 Query: 189 SLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTK 248 ++ R P+ + + NV TL + G K + Sbjct: 252 AVVNRE--------IPSGGLPFQIGCVIQNVGTLKAISEAFRLG----------KPLIDR 293 Query: 249 LMGF-SGRVKNPGLWELPFGTTAREIL-----------EDYAGGMRDGLKFK----AWQP 292 + G + P P GT +++ + +GG G K Q Sbjct: 294 ALTIGGGACEKPLNVIAPIGTCVGDLIPSVVSLKPGVVKIISGGPMMGFAMKNADFPIQK 353 Query: 293 GGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARE--- 349 +G FLT+ + L E IG G + + H ++ V +VR L E Sbjct: 354 NTSGVLFLTKEEISLEEESPCIG-----CGKCIDVCSCH-LSPVLIVRALNAGNTEEAIR 407 Query: 350 ----SCGWCTPCRDGLPWSVKILRALERGE 375 C C C P +K+++ ++ G+ Sbjct: 408 CGLLDCVECGTCAYTCPARIKLVQRVKIGK 437 >UniRef50_D1Y5V9 Electron transport complex protein RnfC n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y5V9_9BACT Length = 447 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 74/381 (19%), Positives = 133/381 (34%), Gaps = 65/381 (17%) Query: 36 EGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEME 95 P E + ++++AG+ G GGA F +K++ P+D I++ + N E E Sbjct: 111 WAPLPDYENCDPKEYLKRIREAGIVGFGGATFPAAVKFAPPPQD---KIKWFIVNGAECE 167 Query: 96 PGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGL 155 P D LM + +V+G + G I + EA L ++A Sbjct: 168 PYLNCDFRLMMESTDEIVKGTALLLRLFPEAEGVIAVENNKPEAIAALSGSVARLGVQ-- 225 Query: 156 LGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTC 215 + V +Y G E LI +L G+ + PA G Sbjct: 226 ------------NVRVQPLTVKYPQGSEKMLIEALTGQEYVVTA---LPADVG-----CI 265 Query: 216 VNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREIL 274 + NV T+ ++ I+ + + +++ +G + P +P GT+ RE++ Sbjct: 266 IANVRTVQQC----------WRAIALGEPSTERVVTVTGDAIAEPKNVCIPLGTSIRELV 315 Query: 275 EDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEIN 334 D+ GG ++ GG + LD+P + GT+ +A+ Sbjct: 316 -DFCGGFKE--APVKVLAGGPMMGM-SMRSLDVP----------AVKGTSGVLALTARST 361 Query: 335 MVSLVRNLEEFFARESCGWCTPCRDGLPW--SVKILRALERGEGQPGDIETLEQLCRFLG 392 M+ +C C C + P L L G+ + + E Sbjct: 362 MLRRAT---------ACLHCGRCVEACPMGLVPSALDTLVLGK----EYDRFEAEGGMNC 408 Query: 393 PGKTFCAHAPGAVEPLQSAIK 413 C + A PL + + Sbjct: 409 IECGSCTYVCPACRPLTQSCR 429 >UniRef50_C0QFQ4 RnfC1 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFQ4_DESAH Length = 455 Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 79/387 (20%), Positives = 140/387 (36%), Gaps = 64/387 (16%) Query: 12 PLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGL 71 + + ++QP + + + + + SPDEI + AG+ G GGA F T + Sbjct: 105 AIEIKTEGEQQPCN-ELWEEMTSTDWSLSTIPDYSPDEIARLIHAAGIVGLGGAAFPTHV 163 Query: 72 KWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIF 131 K +MP D+ + I LL N E EP D LM++ PH +V G L++ A+ A +I Sbjct: 164 K--VMPNDKRL-IDSLLVNGCECEPYLTCDYRLMKEAPHAIVAGALLAGRAVSAKEIFIC 220 Query: 132 LRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLE 191 + EA L A + + V +Y G E L+ ++ Sbjct: 221 IEDNKPEAIEALELATR-----------------NTVVQVAVVRTKYPQGSEKQLVKAVL 263 Query: 192 GRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMG 251 P+ G ++NV T+ V + + K +++ Sbjct: 264 NLDVPLGG---LPSDVGV-----ALSNVGTMAAVA----------RAVIKKGPLTHRIVS 305 Query: 252 FS-GRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPME 310 + G + P P G + E+++ G D + A GG F L P+ Sbjct: 306 VTGGGIVTPKNIFTPIGISMGELIDFCGGLTEDAARIIA---GGPMMGFAFSD-LTTPVT 361 Query: 311 FESIG------------------KAGSRLGTALAMAVDHEINMVSLVRN--LEEFFARES 350 + G + G + V + M + +N L + + Sbjct: 362 KGTSGITILTHAETASGEETACVRCGRCVEACPMNLVPTRLAMAARYKNTALARQYNINA 421 Query: 351 CGWCTPCRDGLPWSVKILRALERGEGQ 377 C C C P ++K+++ + G+ Q Sbjct: 422 CFECGSCTYVCPANIKLVQLIRTGKAQ 448 >UniRef50_Q1Q5X5 Conserved hypothetical iron sulfur protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q5X5_9BACT Length = 446 Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats. Identities = 71/411 (17%), Positives = 129/411 (31%), Gaps = 82/411 (19%) Query: 7 TPETHPLTWR------LRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLK 60 +P HP+ + + + W + + ++P+EI +V AG+ Sbjct: 91 SPYPHPVAGAKSLAVVIENSGEEEWAETL-------NVEQDTENITPEEIRQRVFSAGIV 143 Query: 61 GRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISA 120 G GGA F T +K + + I ++ N E EP D +M + ++EG+ + Sbjct: 144 GLGGATFPTHVKLTPP---KDKTIDTIVMNGAECEPYLTCDHYVMRNNANEVLEGLRLVM 200 Query: 121 FALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYIC 180 + + +I + + L+ +A D + + +Y Sbjct: 201 KCIGCKKAHIGIEANKKDVYELLKNTLA----------------GDPSIKIDLLEVKYPQ 244 Query: 181 GEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNIS 240 G E LI +L R P P +GA V NV T + + Sbjct: 245 GAEHQLIKALLRREFKPTQ---LPMEAGA-----VVINVATAFAINNAVK---------- 286 Query: 241 KSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDF 299 + +++ +G V P + GT R++LE + GG Sbjct: 287 YKRPLIERIITVTGNGVNKPQNLRVRIGTPVRDLLEITG----TSVGLNKIIFGGPMMGI 342 Query: 300 LTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRD 359 SI A + GT + + + + +C C C Sbjct: 343 ----------AQGSIDNAVTIKGTGGILVL-----------KNQPHYESHACIRCGRCIV 381 Query: 360 GLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGK--TFCAHAPGAVEPL 408 P+ + GE + L + K C + A P+ Sbjct: 382 SCPYGLNPSELSIMGES----MNISLALENNVLECKECGCCTYICPAKRPI 428 >UniRef50_A8AH10 Electron transport complex protein rnfC n=6 Tax=Gammaproteobacteria RepID=RNFC_CITK8 Length = 705 Score = 180 bits (458), Expect = 7e-44, Method: Composition-based stats. Identities = 84/423 (19%), Positives = 141/423 (33%), Gaps = 77/423 (18%) Query: 1 MKNIIRTPETHPLTWR-LRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGL 59 + I HP L D + ++G+ ++ S +E++ ++ G+ Sbjct: 89 VIAITPHSTAHPSALAELSVMIDADGEDRWIERDGWADYQR----RSREELITRIHQFGV 144 Query: 60 KGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLIS 119 G GGAGF TG+K + I L+ NA E EP D LM+ +VEG+ I Sbjct: 145 AGLGGAGFPTGVKL----QGGGDKIETLIINAAECEPYITADDRLMQDCAAQVVEGIRIL 200 Query: 120 AFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYI 179 A L+ I + +A LR +A+A ++ + +Y Sbjct: 201 AHILQPREVLIGIEDNKPQAISMLRAVLADAH----------------DIALRVIPTKYP 244 Query: 180 CGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNI 239 G L L G++ + + NV T V + +G Sbjct: 245 SGGAKQLTQILTGKQVPHGGRSS--------DIGVLMQNVGTAYAVKRAVIDG------- 289 Query: 240 SKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTD 298 + +++ +G V PG GT +L D + GG Sbjct: 290 ---EPITERVVTLTGESVSRPGNVWARLGTPVSHLLNDAG---FCSSADQMVIMGGPLMG 343 Query: 299 FLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVS-LVRNLEEFFARESCGWCTPC 357 F LD+P V +++ + E + C C+ C Sbjct: 344 FTLP-WLDVP-------------------VVKITNCLLAPSATEMGETPEEQGCIRCSAC 383 Query: 358 RDGLPW--SVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYF 415 D P + L +G+ D T + + G CA + PL ++YF Sbjct: 384 ADACPADLLPQQLYWFSKGQQH--DKATAHNIADCIECGA--CAWVCPSSIPL---VQYF 436 Query: 416 REE 418 R+E Sbjct: 437 RQE 439 >UniRef50_C7GZP5 Na(+)-translocating NADH-quinone reductase, A subunit n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZP5_9FIRM Length = 448 Score = 180 bits (457), Expect = 8e-44, Method: Composition-based stats. Identities = 73/364 (20%), Positives = 122/364 (33%), Gaps = 65/364 (17%) Query: 48 DEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQ 107 + + V+ +G G GGA F T +K++ DE + L+ NA E EP D LM + Sbjct: 131 ESFIAAVRASGAVGLGGAAFPTHIKFNPKNIDE---VDTLIINAAECEPFITADHRLMLE 187 Query: 108 LPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDF 167 P +++G+ I+ + R I + A L I++ G Sbjct: 188 DPVDILDGIEITMRYMGIKRAIIGIESNKPNAIEVLNSEISKRKLDG------------- 234 Query: 168 ELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPA 227 + + RY G E L GR+ + PA G + NV T+ + Sbjct: 235 -VSIKVLQSRYPQGAERVLAYEATGRKLDAGV---LPADIGLI-----ITNVATIAFIGQ 285 Query: 228 ILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLK 286 + NG+ K + G V P + GT ++++ G + K Sbjct: 286 YMRNGIPLIN----------KRLTVDGDAVNTPQNVIVAIGTPIKDLIAACGGYKKHPKK 335 Query: 287 FKAWQPGGAGTD-FLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEF 345 GG + L + +A E +F Sbjct: 336 I---LMGGPMMGRAIFSDELPI------------IKNNNAILAFADED----------KF 370 Query: 346 FARES-CGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGA 404 E+ C C C P+ +L A + D++TL +L C++ A Sbjct: 371 TMPETPCISCGKCHQACPF--DLLPAAYYKAYKSQDVDTLNKLMINQCMECGSCSYVCPA 428 Query: 405 VEPL 408 +PL Sbjct: 429 RKPL 432 >UniRef50_B5JR42 Electron transport complex, RnfABCDGE type, C subunit subfamily n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JR42_9BACT Length = 456 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 78/379 (20%), Positives = 126/379 (33%), Gaps = 63/379 (16%) Query: 39 RKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGT 98 + + +S EIV V++ GL G GGA F T +K + PKD + +L N E EP Sbjct: 127 SRNVDEMSQQEIVKAVQETGLVGLGGAAFPTHVKLT-PPKDH--KVHTVLINGCECEPFL 183 Query: 99 YKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGK 158 D +M + LV G I AL A R I ++A +R + Sbjct: 184 TTDHRVMLEQAEDLVAGTRIFMKALNAERAIIGTENNKLDAVEAIRAKL----------- 232 Query: 159 NIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNN 218 D + V +Y G E L +L +P++ G V N Sbjct: 233 -----PKDGSITVQAVKTKYPQGAEKMLAKALMNLEIPSGG---YPSSVGL-----AVFN 279 Query: 219 VETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDY 277 V + V A+L + +++ +G ++ G + +P GT R IL+ Sbjct: 280 VSSTAQVGALLP----------VNGGVIERVVTVTGPGIEKQGNYNVPIGTPIRFILDQL 329 Query: 278 AGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVS 337 G R + GG + LD+P+ G + + Sbjct: 330 --GFRGSAQH--IILGGPMMGSC-ISSLDVPITK----------GCGGVLVLTERDVQSE 374 Query: 338 LVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTF 397 R C C C + P + + D + Sbjct: 375 ASR------TSHPCISCGACVEACPMHLNPCQLGRLAYKSQYDEMQSSFHLNDCFECGS- 427 Query: 398 CAHAPGAVEPLQSAIKYFR 416 C++ + PL ++YFR Sbjct: 428 CSYVCPSSIPL---VQYFR 443 >UniRef50_C9M8J9 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8J9_9BACT Length = 439 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 74/356 (20%), Positives = 134/356 (37%), Gaps = 61/356 (17%) Query: 41 ALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYK 100 + L P I + +K+ G+ G GGAGF T +K + + + L+ NA E EP Sbjct: 114 DIESLDPATIRDVIKNTGIVGMGGAGFPTFIKLTPP---KDAVVDQLIINASECEPYLTC 170 Query: 101 DRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNI 160 D L+ + P +++G+ + + + EA + + Sbjct: 171 DYRLILEDPQPIMDGIRALLVLFPEAKLSVGIEDNKPEAIAKFQ---------------V 215 Query: 161 MGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVE 220 + GFD + +Y G E LI ++ GR P PA GA V N Sbjct: 216 LLDGFDERASLKVLKSKYPQGGEKQLIYAITGRSVPPGK---LPADVGAI-----VCNTY 267 Query: 221 TLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAG 279 T ++ L +G + + +++ SG + NPG + +P G + RE+L+ G Sbjct: 268 TTYDIGYALRHG----------RTSLKRIITVSGDAIANPGNYRVPLGISVREVLDAAGG 317 Query: 280 GMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIG------------------KAGSRL 321 + +K A GG + LD+P+ + G + G + Sbjct: 318 FTAEPMKLLA---GGPMMGM-SLHSLDVPVVKGTSGLLALTAAALKVRPETRCIRCGRCI 373 Query: 322 GTALAMAVDHEINMVSLVRNLEEFFAR--ESCGWCTPCRDGLPWSVKILRALERGE 375 + ++ V +++ + F AR +C C C P + + + G+ Sbjct: 374 EACPMGLLPSALDAVVRLQDYKAFQARGGMNCIECGACTYSCPAGRFLTQTCKEGK 429 >UniRef50_Q52716 Electron transport complex protein rnfC n=9 Tax=Bacteria RepID=RNFC_RHOCA Length = 519 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 79/403 (19%), Positives = 132/403 (32%), Gaps = 71/403 (17%) Query: 7 TPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAG 66 + P T +R D + W G R +P+EI QV AG+ G GGA Sbjct: 104 SGLPVP-TITIRPDGEDKW--------GPHLPRLRPENAAPEEIAAQVAAAGIVGMGGAT 154 Query: 67 FSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAY 126 F + +K +L K ++ L+ N E EP D LM + + +G+ I A AL Sbjct: 155 FPSAVKLNLRAK---YDLTTLIINGAECEPYLTCDDRLMRERAEEIADGIGIMARALGVK 211 Query: 127 RGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETAL 186 + ++ + +A + R G+ F++ V +Y G E L Sbjct: 212 QVFVAIESNKPQAIEAMTR-------------YNRALGYTFKIHVV--PTQYPMGSEKHL 256 Query: 187 INSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAG 246 + + G+ R+ A G V+N+ T V + G Sbjct: 257 VKMITGQETPARA---LTADLGV-----VVHNIATAHAVHLAVRYGEPLIA--------- 299 Query: 247 TKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHL 305 + + SG ++ P + GT EI+ G + + GG + Sbjct: 300 -RTVTVSGHGIRRPANLRVLIGTPVSEIIAHCGGFTEEPDRL---LLGGPMMGM-PIQNP 354 Query: 306 DLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSV 365 +P+ GT +A+ + C C C G P + Sbjct: 355 RVPVVK----------GTNGILALTAAETPEAKT---------MPCIRCGRCVQGCPVGL 395 Query: 366 KILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPL 408 GD+E ++ C++ A PL Sbjct: 396 TPFEL--NARIHAGDLEGAAKVGLMDCLACGCCSYNCPANLPL 436 >UniRef50_Q3A7W8 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A7W8_PELCD Length = 437 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 76/413 (18%), Positives = 138/413 (33%), Gaps = 78/413 (18%) Query: 8 PETHP-----LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGR 62 P HP L+ D VW + E +++ L+ +++++++AG+ G Sbjct: 85 PRPHPCGTDLPAVVLKPDGDDVWAE--------EVQKQSFHVLTVAAMLDRIREAGVVGM 136 Query: 63 GGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFA 122 GGA F + +K I ++ NA E EP DR + + ++ G+ + Sbjct: 137 GGAAFPSHVKLDPPR---DKTIDTVIVNAVECEPWLTADRRTLLERMEKVLTGIEVLQKI 193 Query: 123 LKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGE 182 A +I + +A A LL + G + + +Y G Sbjct: 194 TDADHVWIGMEDNQPDA-------------AALLAPHCRQRG----IGLAVLPAKYPQGA 236 Query: 183 ETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKS 242 E LI ++ GRR R P V NV T+ + +++ Sbjct: 237 ERQLIYAVTGRRVPARGLP--------MDVGVLVQNVGTVAALTD----------AVTRQ 278 Query: 243 KDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLT 301 + +++ SG V +P + GT +LE G K GG Sbjct: 279 RPLIERMVTVSGPGVVHPQNLRVRIGTPIAHLLEHCG---LRGEPAK-VLLGGPMMG-TA 333 Query: 302 EAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGL 361 + L +P+ GT+ +A + + + SC C C Sbjct: 334 QHTLAVPV----------LRGTSGVLAFRRQDQTTAAIG---------SCVRCGRCVAAC 374 Query: 362 PWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKY 414 P ++ + ++ E+ C+ A PL +I+Y Sbjct: 375 PMH--LMPTFIADYARRDELALAERFAARNCIECGSCSFVCPAGIPLVQSIRY 425 >UniRef50_A0L5G6 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L5G6_MAGSM Length = 605 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 80/390 (20%), Positives = 131/390 (33%), Gaps = 67/390 (17%) Query: 28 EYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYL 87 E R +G +G + L P +I + V+ AG+ G GGA F + +K S + L Sbjct: 111 EDRLIDGIQGCTDPFS-LEPAQIRDAVRHAGIVGLGGATFPSHVKLSPP---GEKKVELL 166 Query: 88 LCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAI 147 + N E EP D LME+ L+V G+ I AL I + A ++RA+ Sbjct: 167 VLNGVECEPYLTCDARLMEERSGLIVTGVRIMLHALHCKEAVIGIEDNKPGAIAAMKRAV 226 Query: 148 AEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATS 207 + V Y G E LI L GR+ P+ Sbjct: 227 EGEKN----------------ISVRVLPVMYPQGSEKQLIEVLTGRQV--------PSGG 262 Query: 208 GAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPF 266 +N+ T + + +G+ + +++ +GR + P E Sbjct: 263 LPIDVGVVCHNIATAIAIKEAIVDGMPLLK----------RVVTVTGRAINRPANVECLL 312 Query: 267 GTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALA 326 GTT ++L+ G K GG + L P+ GT+ Sbjct: 313 GTTVGDLLKQCGGSRSSMAKL---VMGGPMMG-VALQSLAAPVVK----------GTSGL 358 Query: 327 MAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQ 386 + ++ + N C C C + P S+ + D Sbjct: 359 LVLEKQ----ETTDNP-----EGPCIRCAKCVNVCPMSLMPNEMAWLAKNDQFDALADHD 409 Query: 387 LCRFLGPGKTFCAHAPGAVEPLQSAIKYFR 416 L + G C++ + PL + YFR Sbjct: 410 LFDCIECGT--CSYVCPSSIPL---VHYFR 434 >UniRef50_Q1ZEG2 Electron transport complex protein RnfC n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZEG2_9GAMM Length = 839 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 82/456 (17%), Positives = 149/456 (32%), Gaps = 82/456 (17%) Query: 1 MKNIIRTPETHPL-TWRLRDDKQPVWLDEYRSKNGYEGARKALT--GLSPDEIVNQVKDA 57 + I + P+ HP L + LD Y + K L S ++++++ A Sbjct: 97 VVAIEKHPDLHPSGLSSLSVIIKTDALDRYIN------IEKPLPYWQQSSHFLIDEIQKA 150 Query: 58 GLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGML 117 G+ G GGAGF T LK + LL NA E EP D LM++ + ++ G+ Sbjct: 151 GIVGLGGAGFPTHLKLK-----GHEATQLLLINAAECEPYISADDRLMQEHANEIIAGIN 205 Query: 118 ISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGR 177 + L I + +A L A+ + + Sbjct: 206 VLQHILNPKLTIIAIEDNKPQAIEALTEALNTTKNH---------------IIIRKIPTL 250 Query: 178 YICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQ 237 Y G E LI + G++ P + N+ T+ + L +G Sbjct: 251 YPSGSEKQLIEIITGKQTPIGRHPT--------DLGIVMQNIGTVFAIKEALIDG----- 297 Query: 238 NISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAG 296 K ++++ +G + G + GT + +L+ Y K GG Sbjct: 298 -----KPLTSRIVTLTGDAIAKKGNVSVRIGTPIQYLLDKYHFNPSADQK---VIIGGPM 349 Query: 297 TDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVS-LVRNLEEFFARESCGWCT 355 F T L P+ + +++ ++ + E ++C C+ Sbjct: 350 MGF-TIQDLQSPITKKC-------------------NCILAPTIQEMPEAEQEQACIRCS 389 Query: 356 PCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYF 415 C D P V+++ + D + LE CA + PL + Sbjct: 390 YCADACP--VELMPQQLLWYAKNQDHKKLEAYNLSSCIECGICAFVCPSTIPLVDYYRIA 447 Query: 416 REEF--------EAGIKQPFSNTHLINGIQPNLLKE 443 + E +A I + IQ + ++ Sbjct: 448 KAEIHTAKKESQQADIARQRHEKREARLIQSKIDRQ 483 >UniRef50_B4RTX9 Electron transport complex protein RnfC n=2 Tax=Alteromonas macleodii RepID=B4RTX9_ALTMD Length = 852 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 77/403 (19%), Positives = 131/403 (32%), Gaps = 75/403 (18%) Query: 17 LRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLM 76 +R D + W + + + +E++ + AG+ G GGAGF T +K Sbjct: 115 IRPDGKDTWCEL--------SPIANYSDVHSNELIEAICQAGISGMGGAGFPTHIK---- 162 Query: 77 PKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEY 136 S + +L+ N E EP D LM + + +G+ I + + + Sbjct: 163 -TSTSKPVEFLILNGIECEPYITSDDRLMREHAWQIRQGLDILTHLIGPKAIIVAVEDNK 221 Query: 137 IEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRAN 196 EA L A + E V +Y G E LI + GR Sbjct: 222 PEAFEALSIACQDKK----------------EYRVVNVETKYPAGGEKQLIQVITGREVP 265 Query: 197 PRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSG-R 255 + PA G + NV T + + +G K +++ +G Sbjct: 266 ---RNGLPADIGVM-----MFNVGTCFAIADAILHG----------KPLIERIVTVTGEA 307 Query: 256 VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIG 315 V++P + GT +L++ A K GG F Sbjct: 308 VESPSNFRALIGTPVSHLLDE-AKYNPKKQKKPKVVMGGPMMGF---------------- 350 Query: 316 KAGSRLGTALAMAVDHEIN-MVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERG 374 L A + +V + L + A C C+ C D P S+ + Sbjct: 351 ----TLSDATIPVIKTTNCLLVPAKKELVDDNAERPCIRCSACADACPASLLPQQMFWHA 406 Query: 375 EGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFRE 417 + + D L + G CA+ + PL + Y+R+ Sbjct: 407 KAKEYDKAEEYDLFDCIECGA--CAYVCPSEIPL---VHYYRQ 444 >UniRef50_C9LBM9 Na(+)-translocating NADH-quinone reductase, A subunit n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LBM9_RUMHA Length = 449 Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats. Identities = 79/370 (21%), Positives = 129/370 (34%), Gaps = 61/370 (16%) Query: 35 YEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEM 94 YE + + +EI+ ++D GL G GGAGF T K+ I LL NA E Sbjct: 115 YESKLVDIENFTKEEIIAGIRDGGLTGMGGAGFPTHKKYE-----TDKKIDALLINAAEC 169 Query: 95 EPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAG 154 EP D LM + + + G+ + A A + Y+ + EAA L + + Sbjct: 170 EPFLTCDYRLMLEYSYAVANGIRLLLKASGAPKAYLCMEDNKPEAAKVLGKILENTK--- 226 Query: 155 LLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPT 214 ++ V +Y G E LI ++ GR PA +GA Sbjct: 227 -------------DIEVKVLPTQYPQGGERQLIQAVLGREVPMGG---LPAEAGAI---- 266 Query: 215 CVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREIL 274 V+NV T +L + +++ +G VKNPG + +P GT+A+E++ Sbjct: 267 -VSNVGTAKATADMLLGKTPLIR----------RIVTVTGCVKNPGNYLVPIGTSAKELV 315 Query: 275 EDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEIN 334 E G + GG T + + E + K T+ + + Sbjct: 316 ELCGGVTVKNNR---VIAGGPMTGPCVASDWNGESELFYVTK-----NTSGILVLPDSQ- 366 Query: 335 MVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPG 394 + + C C C P ++ D + E L Sbjct: 367 -----------YEEQPCIRCAGCESVCP--AGLVPYQIEFAYLEEDYDLCESLYASECIA 413 Query: 395 KTFCAHAPGA 404 C++ A Sbjct: 414 CGCCSYICPA 423 >UniRef50_A9KN64 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=8 Tax=Bacteria RepID=A9KN64_CLOPH Length = 442 Score = 174 bits (440), Expect = 8e-42, Method: Composition-based stats. Identities = 69/325 (21%), Positives = 114/325 (35%), Gaps = 61/325 (18%) Query: 45 LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLL 104 + +E+ VK+ G+ G GGAGF T K+S + ++ N E EP R L Sbjct: 2 MVIEELSQIVKEYGICGAGGAGFPTYAKFS-------NKVDTIILNCAECEPLLKLHRQL 54 Query: 105 MEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTG 164 + + +++ I A ++ A I ++ Y + I G Sbjct: 55 LRDRAYEVLKAFSIIAESIGAKEAIIVVKPSYKNTIAAVEAEI----------------G 98 Query: 165 FDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCN 224 + + Y G+E LI GR P P V NVET+ N Sbjct: 99 AYKNMSLKLCKEVYPAGDEVVLIYEATGRVVKPGGLP--------VDIGVAVFNVETVYN 150 Query: 225 VPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDG 284 V Y+ + + +KL+ G VK P +P G T +E++E G Sbjct: 151 V----------YEAVINHRPVTSKLVSVVGEVKEPKTVRVPLGMTVKEVVEMVGGITT-- 198 Query: 285 LKFKAWQPGGAGTDFL-TEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMV---SLVR 340 K A+ GG + +E HL + + + + ++ Sbjct: 199 -KEPAYLMGGPMMGSVESEQHLITKT-------------SNAIIVLPKDHYVIIRKESKP 244 Query: 341 NLEEFFARESCGWCTPCRDGLPWSV 365 +++ A SC C C D P + Sbjct: 245 SIDLKRAAASCCHCEMCTDLCPRHL 269 >UniRef50_D1PN92 Na(+)-translocating NADH-quinone reductase, A subunit n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN92_9FIRM Length = 456 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 71/371 (19%), Positives = 122/371 (32%), Gaps = 64/371 (17%) Query: 46 SPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLM 105 ++ ++ GL G GGAGF T +K + + + LL NA E EP D M Sbjct: 130 DKASLLAAIQACGLVGVGGAGFPTHVKLA------ADTVDTLLINAAECEPYLTTDCREM 183 Query: 106 EQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGF 165 + ++ G+ I + E + L +N+ G Sbjct: 184 LECSDTIISGIAAVMKYCNIPNCIIGIERNKPECIDQMYS----------LTRNMSG--- 230 Query: 166 DFELFVHTGAGRYICGEETALINSLEGRRAN---PRSKPPFPATSGAWGKPTCVNNVETL 222 + V RY G E L+ + GR P K PA G + NV ++ Sbjct: 231 ---VSVKPLPTRYPQGAEKTLVETCTGREVPQVGPSGKAGLPADVG-----CIIMNVTSV 282 Query: 223 CNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGM 281 + L G+ TK + G + P E+P GT R+++E GG+ Sbjct: 283 STLGKYLKTGMPL----------TTKRVTVEGDAIAKPQNVEVPIGTLYRDVIE-ACGGI 331 Query: 282 RDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRN 341 + ++ GG +A + ++ + Sbjct: 332 KPDVELGKIIFGGPMMGGAAP--------------------SADFPVLKQNNGLLLFSKK 371 Query: 342 LEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHA 401 + +C C C D P ++ + E + D + L+ C L C++A Sbjct: 372 AADLPEASACIRCGRCIDACPMGLEPVVVAEAFNNR--DFDALKARCVDLCVACGSCSYA 429 Query: 402 PGAVEPLQSAI 412 A P+ + Sbjct: 430 CPAKRPVSQTM 440 >UniRef50_Q31GU4 NADH oxidoreductase, RnfABCDGE type, C subunit n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31GU4_THICR Length = 704 Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 82/427 (19%), Positives = 148/427 (34%), Gaps = 83/427 (19%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 L+ L D++ ++ +G T +PD++ V AG+ G GGAGF T K Sbjct: 122 LSIVLESDQKDQAIENSLEVDG-------ATPGTPDKLKALVHKAGIVGMGGAGFPTFAK 174 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 + I+YLL N E EP D +LM+ +V+G +I A +L + Sbjct: 175 I----PSQPGQIKYLLINGAECEPFITCDDMLMQTRAEDIVQGAMIVAQSLGIKHILCGI 230 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 +A +++A D ++ ++ A Y G +T L L G Sbjct: 231 EDNKAKAIKAMQKAAK-----------------DTDVQINVVATAYPMGGQTQLTQELTG 273 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGF 252 PA + A + NV T + YQ + + ++ + Sbjct: 274 IE--------LPAHTHAIDVGVLMMNVATFAAI----------YQAVVQGNPLTSRYITV 315 Query: 253 SG-RVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEF 311 SG + P + GT+ +E+ A A P+++ Sbjct: 316 SGLGLNKPFNIDARLGTSFKEL---------------ALL-----------ADPKTPLDY 349 Query: 312 ESIGKAGSRLG----TALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKI 367 + K G +G + + +++ E C C C D P ++ + Sbjct: 350 -PLIKGGPMMGIEMQSNDVPVIKTTNCILATPPEPLE--EPMPCIRCGECMDACPVNL-L 405 Query: 368 LRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPF 427 + L + + + +E L F C+ + PL ++ + E + IKQ Sbjct: 406 PQQLYW-HSRSHEFDKVESLKVFDCIECGCCSFVCPSHIPLVQYYRFAKSEIK-HIKQEE 463 Query: 428 SNTHLIN 434 + L Sbjct: 464 ATAELAK 470 >UniRef50_Q5P537 Electron transport complex protein rnfC (Nitrogen fixation protein rnfC) n=11 Tax=Proteobacteria RepID=Q5P537_AZOSE Length = 508 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 79/384 (20%), Positives = 126/384 (32%), Gaps = 60/384 (15%) Query: 44 GLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRL 103 L P EI +V AG+ G GGA F + +K S N+ L+ N E EP D Sbjct: 127 ALDPAEIGRRVSAAGIVGLGGAAFPSAVKLS---GGREANVDLLIINGGECEPFLSCDDR 183 Query: 104 LMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGT 163 LM + ++G+ I A A I + EA Sbjct: 184 LMRERAADAIDGVAIMLHATGAREARIGIEDNKPEAIA----------------AMRAAA 227 Query: 164 GFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLC 223 ++ V RY G E L+ +L G + PA G V+NV T Sbjct: 228 AGHPKIRVEPVPTRYPMGSEKHLVLALTGLEVPANGR---PADVGV-----VVHNVATAV 279 Query: 224 NVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMR 282 V + G + ++L+ +G V+ PG E+ GT + + ++ GG+R Sbjct: 280 AVRDAVRFG----------RPLVSRLVTVNGACVREPGNVEVLIGT-LADEVVEFCGGLR 328 Query: 283 DGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNL 342 A G + L +P+ GT + +D + + Sbjct: 329 ADRGAPARLLLGGPMTGMQVPSLRVPVIK----------GTGGILVLDGDEVGLRAPG-- 376 Query: 343 EEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAP 402 C C+ C P + L R GD++ + CA+ Sbjct: 377 -------PCIRCSTCVRACPVGLLPLEIARRIGA--GDLDAAVKFGLKDCIACGCCAYDC 427 Query: 403 GAVEPLQSAIKYFREEFEAGIKQP 426 + PL + + E A + Sbjct: 428 PSHIPLVQYFHHAKGELAARDRHK 451 >UniRef50_Q67R12 Na+-transporting NADH-quinone reductase subunit 1 n=1 Tax=Symbiobacterium thermophilum RepID=Q67R12_SYMTH Length = 446 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 91/406 (22%), Positives = 139/406 (34%), Gaps = 78/406 (19%) Query: 8 PETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGF 67 PE P W D LD L P I ++V+ AGL G GGAGF Sbjct: 103 PEDQP--WEGLPDGLGWDLDP--------------ESLDPAFIRDRVRQAGLVGMGGAGF 146 Query: 68 STGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYR 127 +K + P E ++ N E EP D LM + P +V G+ + A A R Sbjct: 147 PAAVKLTPKPGTE---PDVVILNGAECEPAITSDHRLMLEHPEQVVLGLRLFMRASGAKR 203 Query: 128 GYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALI 187 G I + +AA L + +A D + V RY G E L+ Sbjct: 204 GIIAVEANKPDAAGKLSQLVA----------------GDPAISVEVLPVRYPQGAEKMLV 247 Query: 188 NSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGT 247 +L RRA P P + V +A +++ + Sbjct: 248 WALL-RRAVPVGGIPLDVGA-----------------VVQNVATAAAAAVALAEGRPLTH 289 Query: 248 KLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDL 307 +++ +GRV PG W +P GT+ +++E +GG+ GG LD+ Sbjct: 290 RIVTVTGRVTRPGNWLVPLGTSFVDLVE-ASGGLTGP--LARVIAGGPMMGIAQPD-LDV 345 Query: 308 PMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKI 367 P+ I GS + + +++ C C C P + Sbjct: 346 PV----IKTTGS-----VILLGPEDLDE----------TPAGPCIRCGRCVAACPM--GL 384 Query: 368 LRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIK 413 L A GD E+ C++ A PL +I+ Sbjct: 385 LPARLCSAALAGDWGAAERYHVRACMECGSCSYVCPARRPLVQSIR 430 >UniRef50_Q15RL3 Electron transport complex, RnfABCDGE type, C subunit n=3 Tax=Alteromonadales RepID=Q15RL3_PSEA6 Length = 890 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 72/400 (18%), Positives = 132/400 (33%), Gaps = 75/400 (18%) Query: 21 KQPVWLDEY---RSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMP 77 +P LD++ Y+ K ++ + +AG+ G GGAGF T +K Sbjct: 119 IEPDNLDKWAILSPLQDYQSLPKV-------TVLEAICNAGISGMGGAGFPTHIK----- 166 Query: 78 KDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYI 137 ++ +++ N E EP D LM + + +G+ + L + YI + Sbjct: 167 AAPKKDVEFIIINGVECEPYITSDDRLMREHAWQIRQGIDVLCHLLSPKQVYIAIEDNKP 226 Query: 138 EAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANP 197 EA +R A ++ + V A +Y G E LI + R Sbjct: 227 EAIEAMRVACQQSEQY----------------KVVPIATKYPAGGEKQLIQVITNREVPK 270 Query: 198 RSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-V 256 + P ++NV T + + +G K +++ +G+ V Sbjct: 271 QGLP--------IDVGVIMHNVGTCFAIADAIFSG----------KPLIQRVVTITGKAV 312 Query: 257 KNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGK 316 + P G+ +L AG + K GG F + Sbjct: 313 ETPKNVWALIGSPVAHLLSS-AGYVAHRQAQKHIIMGGPMMGFTVASDQ----------- 360 Query: 317 AGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEG 376 + + ++ + E A + C C+ C D P S+ + + Sbjct: 361 --------VPVVKITNCLLLPTSDEMAEPEAEQPCIRCSACADACPVSLLPQQLFWHSKA 412 Query: 377 QPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFR 416 + D L + G CA+ + PL + Y+R Sbjct: 413 KELDKAQDYNLFDCIECGA--CAYVCPSEIPL---VHYYR 447 >UniRef50_Q2SKU6 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC n=7 Tax=Proteobacteria RepID=Q2SKU6_HAHCH Length = 821 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 88/431 (20%), Positives = 143/431 (33%), Gaps = 86/431 (19%) Query: 1 MKNIIRTPETHP-----LTWRLRDDKQPVW-----LDEYRSKNGYEGARKALTGLSPDEI 50 + + R P HP + + D + W ++YR+ LSP+++ Sbjct: 81 VTAVERRPVPHPSGLSDVCIVIETDGEDAWTHLTPCEDYRA-------------LSPEQL 127 Query: 51 VNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPH 110 + +V+ G+ G GGAGF T +K D + L+ NA E EP D +LM + Sbjct: 128 LERVRQGGIAGMGGAGFPTAIKLHPPRND---KVNALILNAAECEPYITADDMLMRERAD 184 Query: 111 LLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELF 170 ++ GM I A L+ I + EA L++A + Sbjct: 185 EVIRGMEIMAQLLEPEECLIGIEDNKPEAIAALQQA-----------------ASGTHIE 227 Query: 171 VHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILA 230 V +Y G E LI L G P K PA G NV T V + Sbjct: 228 VVVIPTKYPSGGEKQLIKILTGLEV-PHGK--IPADIGVM-----CQNVGTAAAVYRAVR 279 Query: 231 NGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKA 289 G + +++ +G V PG +E+ G ++L+ D K Sbjct: 280 FG----------EPLISRITTVTGDGVATPGNFEVLLGAPMSDLLQQAG---FDADKTDR 326 Query: 290 WQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARE 349 GG F + LDLP+ M + + Sbjct: 327 LIMGGPMMGF-SLTDLDLPL------------------VKTSNCIMAVSAKEFPRPDPAQ 367 Query: 350 SCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQ 409 +C C C + P + + + Q D L + G C++ + PL Sbjct: 368 ACIRCGLCAEACPAELLPQQLYWFSKAQEFDKAENYNLFDCIECGA--CSYVCPSSIPLV 425 Query: 410 SAIKYFREEFE 420 +Y + + Sbjct: 426 QYYRYAKHQIR 436 >UniRef50_C1SKX2 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SKX2_9BACT Length = 436 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 64/345 (18%), Positives = 105/345 (30%), Gaps = 65/345 (18%) Query: 57 AGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGM 116 AG+ G GGA F + +K S ++ LL N E EP D +M + +++G Sbjct: 126 AGIAGMGGATFPSHVKLS-----PPKDVDTLLINGAECEPYLTCDHRIMLERTEDVIKGA 180 Query: 117 LISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAG 176 + LK + I + +A + ++ + Sbjct: 181 SLIRDNLKLKKLIIGIEKNKPDAIEEFAK-----------------YEQEYNFELVELEV 223 Query: 177 RYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWY 236 +Y G E LI + R P V+NV T + L + Sbjct: 224 KYPQGGEKQLIKACLNRVV--------PEGQLPMEVGVIVHNVGTCAAIYDALERQKPLF 275 Query: 237 QNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAG 296 + +++ +G VK P + GT +++E + GG K K GG Sbjct: 276 E----------RMVTVTGAVKEPKNLIVRVGTPISKLIE-HCGGFTG--KPKKIIMGGPM 322 Query: 297 TDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTP 356 L LD P+ GT+ + E +M L + C C Sbjct: 323 MG-LAVTSLDTPV----------MKGTSGILVYRDE-DMPDLTQYK--------CMRCGR 362 Query: 357 CRDGLPW--SVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCA 399 C + P + E + C G C Sbjct: 363 CIEACPMGLVPSAMDRFVVKEMYESLADWHVMNCIECGCCSYVCP 407 >UniRef50_C0R202 Electron transport complex protein n=2 Tax=Brachyspira RepID=C0R202_BRAHW Length = 435 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 68/351 (19%), Positives = 119/351 (33%), Gaps = 56/351 (15%) Query: 44 GLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRL 103 +S +E+ +++ AG+ G GGA F T +K + N L+ N E EP D Sbjct: 119 SMSAEEMSKKIQQAGIVGMGGATFPTHVK---VDGAAKGNADTLIINGVECEPYITSDYR 175 Query: 104 LMEQLPHLLVEGMLISAFALK-AYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMG 162 LM + L +G+ I + R I + +A + + Sbjct: 176 LMIEYAQDLFKGIDILRKIVPSVKRTIIGIENNKPKAIEEMAK----------------- 218 Query: 163 TGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETL 222 G + + V RY G E LI + GR P + V N+ TL Sbjct: 219 IGKEHNVEVMALRLRYPQGAEKMLIEATTGRIV--------PVSKLPMDVGVIVVNIATL 270 Query: 223 CNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYA--- 278 + Y+ ++K+K +L+ SG +K LP GT ++E+ Sbjct: 271 YAI----------YEAVAKNKPLMERLVTISGDAIKEHKNVWLPLGTPISHVVEECGGIT 320 Query: 279 --------GGMRDGLKF----KAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALA 326 GG G + G FL + L +E+ I L Sbjct: 321 AENVLILSGGPMMGAAIPNLEQCVNKGTNSLLFLDKDKLAKEVEYPCIKCGRCGNACPLH 380 Query: 327 MAVDHEINMVSL-VRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEG 376 ++ + +++ +C C C P + +++ + G+ Sbjct: 381 LSPTELAHTAKAKIKDKLNDLDIATCFECGCCTYICPSKIPLVQWIRFGKD 431 >UniRef50_A8ZSV2 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZSV2_DESOH Length = 454 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 77/382 (20%), Positives = 138/382 (36%), Gaps = 65/382 (17%) Query: 33 NGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNAD 92 G + A P I + AG+ G GGA F T +K +MP D+ + LL N Sbjct: 125 GGDWP-KDAADKHDPKAISEAISAAGIVGLGGAAFPTHVK--IMPNDKR-PVDALLINGC 180 Query: 93 EMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATE 152 E EP D +M + ++ G L++ A+ A + + + +A + RA Sbjct: 181 ECEPFLTPDYRIMVEAADAVICGALLAGRAVGAKQIVVGIEANKPKAVEAMTRA------ 234 Query: 153 AGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGK 212 GT + + +Y G E LI ++ R+ P P GA Sbjct: 235 -------AQGTA----VKIAVLKTKYPQGSEKHLIMAVMKRKVPPGK---LPLEVGA--- 277 Query: 213 PTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFS-GRVKNPGLWELPFGTTAR 271 V+NV T+ V + + + K +++ + G + P +P G + Sbjct: 278 --AVSNVGTVVAVA----------RAVLRKKPLTHRVVCVTGGGIVQPKNLLVPIGISYG 325 Query: 272 EILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDH 331 E++E + GG+R + GG F +++P+ G + + Sbjct: 326 ELIE-FCGGLRP--EAARIVSGGPMMGFAFTD-MEMPVTK----------GASGVTVLTR 371 Query: 332 EINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFL 391 + + +C C C D P + ++ + + ++E E+ F Sbjct: 372 DD---------VKKAEETACVRCGRCVDVCP--LNLVPSKLAVASRNKNLEVAERYNIFT 420 Query: 392 GPGKTFCAHAPGAVEPLQSAIK 413 CA+ A PL I+ Sbjct: 421 CLECGCCAYTCPASLPLVQLIR 442 >UniRef50_Q21I18 Serine/threonine protein kinase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21I18_SACD2 Length = 745 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 67/362 (18%), Positives = 110/362 (30%), Gaps = 66/362 (18%) Query: 43 TGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDR 102 L D +V +++ AG+ G GGAGF T +K + + +++ L+ N E EP D Sbjct: 120 AQLDHDRLVQKIRAAGIVGMGGAGFPTAIKVNP---KSNKHVKTLIFNGTECEPYITADD 176 Query: 103 LLMEQLPHLLVEGMLISAFALK-AYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIM 161 +LM + +V+G+ + A + I + EA +++A Sbjct: 177 MLMRERADDIVKGVQLIARFMGEVEETLIGIEDNKPEAIAAMQKAAE------------- 223 Query: 162 GTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVET 221 ++ V +Y G E LI L G+ PA G V NV T Sbjct: 224 ----GTDIEVVVFPTKYPSGGEKQLIQILTGKEVPSGG---LPADIGI-----VVQNVGT 271 Query: 222 LCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGM 281 + G ++ G L ++ GT +LE + Sbjct: 272 ALAAYRAVRFGEPLISRVTTV--VGETLTT-------QRNIDVLIGTPLSFVLEQHGFKA 322 Query: 282 RDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRN 341 + GG F D+P+ N + Sbjct: 323 EKKQRL---IIGGPMMGF-AANDFDVPVV--------------------KTTNCILAPTQ 358 Query: 342 LEEFFA--RESCGWCTPCRDGLPW--SVKILRALERGEGQPGDIETLEQLCRFLGPGKTF 397 E A ++C C C + P + L + E C G Sbjct: 359 KELPLAPPAQACIRCGMCAEACPASLLPQQLFWYSQAEDHDRLKAHNLFDCIECGACSYV 418 Query: 398 CA 399 C Sbjct: 419 CP 420 >UniRef50_D0L1N5 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L1N5_HALNC Length = 567 Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 79/436 (18%), Positives = 140/436 (32%), Gaps = 83/436 (19%) Query: 1 MKNIIRTPETHP-----LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVK 55 + +I P HP + L D +W + Y+ +SP ++ +++ Sbjct: 89 IVDISPQPIAHPGGLSAPSIILEADGDDIWAERMTPWVDYQ-------DISPAQLRGRLR 141 Query: 56 DAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEG 115 +AG+ G GGA F T K +R L+ N E EP D LM + P ++ G Sbjct: 142 EAGIVGLGGAVFPTASKM----ATGQAAVRTLILNGAECEPYITCDDRLMREQPAEILRG 197 Query: 116 MLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGA 175 I+ + A R I + EA L+ A + D V++ Sbjct: 198 AAIAMHMIGAERCLIGIEDNKPEALAALQSA----------------SRSDPRFEVYSVP 241 Query: 176 GRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEW 235 RY G E LI L P A NV T+ + Sbjct: 242 TRYPAGGEKQLIKVLTNIEV--------PRGHRAIEYGLLCLNVATVVGI---------- 283 Query: 236 YQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGG 294 ++ ++ + +++ +G + P ++ GT +++ + G + + GG Sbjct: 284 HRAVTLGEPMLDRIVTVTGEGIAQPENLQVRIGTLMSDVVAEAGGYRSEVDRL---IMGG 340 Query: 295 AGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFF--ARESCG 352 F + V N + +R + A + C Sbjct: 341 PMMGFAL---------------------HGDEVPVVKATNCLLALRPQDRPAEPAPQPCI 379 Query: 353 WCTPCRDGLPW--SVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQS 410 C+ C + P + L R + +E C G C + PL Sbjct: 380 RCSLCAEACPADLLPQQLYWYARAKQFDRVVEYHLFDCIECGVCSAVCP----SHLPLVD 435 Query: 411 AIKYFREEFEAGIKQP 426 +Y + E A ++ Sbjct: 436 YYRYAKTEVWAREREK 451 >UniRef50_C4L9H6 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9H6_TOLAT Length = 483 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 78/369 (21%), Positives = 129/369 (34%), Gaps = 62/369 (16%) Query: 39 RKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGT 98 +A LS +E++N V++AG+ G GGA F T K L I L+ N E EP Sbjct: 107 ARANNTLSREEMINLVEEAGIVGMGGAMFPTSDKLRLSMH---YLIDTLIINGSECEPYL 163 Query: 99 YKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGK 158 D LM++ ++ G+ A + +I + EA + A+ +A + Sbjct: 164 TCDDRLMQEQGDRIMGGIRYLQQITLADKVFIGIEENKPEAIAAME-ALCKAEK------ 216 Query: 159 NIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNN 218 + V Y G E LI ++ GR+ P+ + V N Sbjct: 217 ---------NMQVVGLPALYPMGSEKQLIEAVTGRQV--------PSGKLSADVGVLVQN 259 Query: 219 VETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDY 277 V T + L G + +++ SG V+ P P G EI+ Sbjct: 260 VATSIAIFEALRFG----------RPLTHRVITISGDAVEVPSNVMAPVGMPISEIVAQC 309 Query: 278 A-----------GGMRDGLKF----KAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLG 322 GG G G +G LTE L P + + + G +G Sbjct: 310 GGLKSTPARIVLGGPMMGRAITDIHAPVTKGTSGVLLLTEDELPNP-KASACVRCGRCIG 368 Query: 323 TALAMAVDHEINMVSLVRNLEEFFAR-----ESCGWCTPCRDGLPWSVKILRALERGEGQ 377 ++MV+ + ++ F C C C P ++ + + + G+ + Sbjct: 369 ACPMSLTP--LDMVAEL-KVDNFGKAAEMGVMDCLLCGSCAYVCPAAIPLTQYFDWGKQE 425 Query: 378 PGDIETLEQ 386 I EQ Sbjct: 426 VSKIRLSEQ 434 >UniRef50_C4Z9G3 RnfC/nqrF n=16 Tax=Bacteria RepID=C4Z9G3_EUBR3 Length = 443 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 89/388 (22%), Positives = 140/388 (36%), Gaps = 64/388 (16%) Query: 35 YEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEM 94 YE T LS +EI+ +VK+AG+ G GGAGF T +K S E I Y++ N E Sbjct: 110 YESVEDV-TALSKEEIIEKVKNAGVVGMGGAGFPTHVKLSP---KEPDKIEYIIANCAEC 165 Query: 95 EPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAG 154 EP D M + P L+ GM I +G + + + L Sbjct: 166 EPYLTSDYRRMLENPEELIGGMKIILQLFDNAKGILGIEDNKPDCIEKLTE--------- 216 Query: 155 LLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPT 214 T + + V +Y G E LI + GR N + PA +G Sbjct: 217 -------LTKDEPRIEVCPLMTKYPQGGERQLIYATTGRAINSKM---LPADAG-----C 261 Query: 215 CVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREI 273 V+NVET+ V + NG + IS +G VKNP GT+ +E+ Sbjct: 262 IVDNVETIIAVYNAVKNGQPVLKRIS----------TVTGDAVKNPSNILYSIGTSYQEL 311 Query: 274 LEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEI 333 ++ G K GG F LD+P ++ + H+ Sbjct: 312 VDAAGGFKSQPEKI---ISGGPMMGF-AMFSLDIPTTKT----------SSSILCFTHD- 356 Query: 334 NMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGP 393 + F ++C C C + P +++ + G G ++ E+ Sbjct: 357 -------EVAAF-EPQACINCGRCVEACP--EQLIPSRLAKFGLRGQMDEFEKWHGLECI 406 Query: 394 GKTFCAHAPGAVEPLQSAIKYFREEFEA 421 C+ A + + IK ++ A Sbjct: 407 ECGSCSFACPSRRQVAQPIKTMKKLVLA 434 >UniRef50_C2MC01 Electron transport complex protein RnfC n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MC01_9PORP Length = 412 Score = 168 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 57/256 (22%), Positives = 99/256 (38%), Gaps = 31/256 (12%) Query: 43 TGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDR 102 T L +I++++ + G+ G GGA F T +K S P + Y++ NA E EP D Sbjct: 119 TDLDAKQIIDRIAEMGIVGMGGATFPTHVKLSPPPGQSA---DYVIINAVECEPYLTSDD 175 Query: 103 LLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMG 162 LM ++ G I A A R I + +A +R A A E G++ Sbjct: 176 ALMRVKAMEIMVGCAIIMKAANAPRTLIGIEVNKPDAIRIMRDAAERAKEFLPEGQS--- 232 Query: 163 TGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETL 222 + V RY G E LI++L + + + V NV T Sbjct: 233 ------ISVVPLKKRYPQGGEKQLIDAL--------IRKQVASGALPISTGAIVQNVGTT 278 Query: 223 CNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGM 281 + Y+ + K K +++ +GR + +P ++ GT+ + +++ G Sbjct: 279 FAI----------YEAVMKHKPLIERIITVTGRAIMHPSNFKARIGTSMQTLIDAAGGYA 328 Query: 282 RDGLKFKAWQPGGAGT 297 + K P + Sbjct: 329 EEPGKIIGGGPMIGSS 344 >UniRef50_A9BJD0 Electron transport complex, RnfABCDGE type, C subunit n=15 Tax=Bacteria RepID=A9BJD0_PETMO Length = 440 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 72/360 (20%), Positives = 120/360 (33%), Gaps = 62/360 (17%) Query: 42 LTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKD 101 S +E++N VK AG+ G GGA F + +K S+ + YL+ N E EP D Sbjct: 117 FKKFSKEELINIVKKAGIVGLGGAMFPSHVKLSIPA---GKKVDYLIINGAECEPYITVD 173 Query: 102 RLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIM 161 ++M +++G+ I + + + Y+ + EA ++ A+ Sbjct: 174 DMMMRTYTEEIIKGIKIIEYIVNPGKIYVGIEENKPEAIKAMKNALK------------- 220 Query: 162 GTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVET 221 + + V +Y G E LI S+ R P+ V N+ T Sbjct: 221 ----NENIEVAILKTKYPQGAEKQLIKSITKREV--------PSGGLPIDAGALVFNIST 268 Query: 222 LCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGM 281 + + NG K + + SG VK PG + GT ++L G+ Sbjct: 269 TYAIYDAVING----------KPLVERGITLSGGVKKPGNYWFRIGTKVSDLLNQV--GL 316 Query: 282 RDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRN 341 + K GG T L ++DLP + G + E Sbjct: 317 VEEEKIDRIIYGGPMTG-LPLPNIDLP----------TFKGNNAITVLTKEEIPQK---- 361 Query: 342 LEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQL--CRFLGPGKTFCA 399 C C C P ++ + + + DI + C G C Sbjct: 362 -----HEYPCIRCASCVKACPIGLQPYYLKKLADARKNDIAQENGIMDCIECGACSYICP 416 >UniRef50_C8WMP9 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WMP9_EGGLE Length = 442 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 79/382 (20%), Positives = 131/382 (34%), Gaps = 66/382 (17%) Query: 46 SPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLM 105 + +K +GL G GGAGF T +K + +E I + NA E EP D M Sbjct: 123 DQASFLAAIKKSGLVGLGGAGFPTDIKLAPPNLEE---IDLYVVNATECEPYLSTDYREM 179 Query: 106 EQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGF 165 + P ++ G+ + L I + +A +R T Sbjct: 180 MESPDDVLFGIRETCRHLGIPNAMICIESNKPKAIELMRE----------------LTKD 223 Query: 166 DFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNV 225 D + V RY G E L+++ G R PR K +NNV T+ ++ Sbjct: 224 DSSIQVKALPSRYPQGAENVLVHNATG-RVVPRGKRQT-------DVGVMLNNVTTMASI 275 Query: 226 PAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDG 284 L G+ + + SG + P + GT R+++E +AG ++ Sbjct: 276 GRFLKTGMPLVK----------RRFTVSGDAIARPCNANIIIGTRLRDVME-FAGLTKEP 324 Query: 285 LKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEE 344 K G + A +D M++ I + + + E Sbjct: 325 HKVV------LGGPMMGNAQID--MDYPVIRQNN------GVLVFSKDA---------ME 361 Query: 345 FFARESCGWCTPCRDGLPWSVKILRALERGEG-QPGDIETLEQLCRFLGPGKTFCAHAPG 403 A +C C C + P L + + D + L+ L L G C+ Sbjct: 362 QPATTACIRCGRCTNSCPMQ---LSPIAIKKAYTVQDAKKLDDLMADLCMGCGTCSFVCP 418 Query: 404 AVEPLQSAIKYFREEFEAGIKQ 425 A +PL K R+ A + + Sbjct: 419 AKQPLAQTSKLARDFMRAEMAR 440 >UniRef50_Q0F0I1 Electron transport complex protein RnfC n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F0I1_9PROT Length = 521 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 75/372 (20%), Positives = 123/372 (33%), Gaps = 61/372 (16%) Query: 46 SPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLM 105 P + + + GL G GGA F T +K +D I ++ N E EP D LM Sbjct: 135 DPALLRERARMCGLAGLGGAVFPTFIKLV---QDSRFPIETVVLNGIECEPWLTTDHRLM 191 Query: 106 EQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGF 165 + ++ G+ I + I + +AA + +A+A L ++ G Sbjct: 192 LEYADEILTGLAIIMHMVNTDSAIIAIEDNKSDAAEAIEQALA-------LRDDLEGA-- 242 Query: 166 DFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNV 225 V RY G E LI SL GR PA NV T Sbjct: 243 ----RVVLLPTRYPQGSEKQLIYSLTGREV--------PAGKLPMHIGMLCQNVATA--- 287 Query: 226 PAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDG 284 Y+ + +++ +L+ SG + P + GT R + G+ D Sbjct: 288 -------RALYRAVVRAEPLTERLVTVSGDAMPRPANLHVRIGTPMRYVFAQQ--GLTDF 338 Query: 285 LKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEE 344 + G + L H D+P+ T +A+ + Sbjct: 339 EDVRILHGGPMMGELLR--HPDVPVVKS----------TNGMLAMLE-------ASFMGG 379 Query: 345 FFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGA 404 ++C C C + P ++ L + + E E F C++ + Sbjct: 380 HTQEQACIRCGHCSEACP--AGLVPNLLADQCRSDQFEKAESYDLFDCIECGACSYVCPS 437 Query: 405 VEPLQSAIKYFR 416 PL + YFR Sbjct: 438 NIPL---VHYFR 446 >UniRef50_C8WE25 Electron transport complex, RnfABCDGE type, C subunit n=3 Tax=Zymomonas mobilis RepID=C8WE25_ZYMMN Length = 487 Score = 167 bits (423), Expect = 7e-40, Method: Composition-based stats. Identities = 74/375 (19%), Positives = 135/375 (36%), Gaps = 63/375 (16%) Query: 46 SPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLM 105 P I +V AG+ G GGA F +K + I+ ++ N E EP D +M Sbjct: 123 DPQLIRERVAWAGVVGLGGAAFPAAVKLE---QSSQKPIKMVVLNGAECEPYLTGDDRVM 179 Query: 106 EQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGF 165 ++ ++ G + A A+ A + I + EA +++ AEA + Sbjct: 180 QEYADEVISGGRLIAHAVGAPKVVIGIERNKPEAIAIMKKT-AEAYD------------- 225 Query: 166 DFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNV 225 + + +Y G L+ +L G + R++ A G V NV T V Sbjct: 226 --NVEIADLPAQYPVGSARHLVQALTGLEISARTRI---ADVGV-----LVQNVGTARAV 275 Query: 226 PAILANGVEWYQNISKSKDAGTKLMGFS-GRVKNPGLWELPFGTTAREILEDYAGGMRDG 284 G + ++++ S G + +P + P G+ + ++ D+ GGM + Sbjct: 276 WRSARYG----------EPLISRIVTVSGGGMNDPKTLDAPIGSPVKALI-DFCGGMNE- 323 Query: 285 LKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEE 344 K + GG ++D+P+ GTA +A+ + Sbjct: 324 -KAEQIVTGGPLMGVGLP-NIDVPVIK----------GTAGILAL---------TSEEMD 362 Query: 345 FFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGA 404 E+C C C D P + + + +E +E+L C++ + Sbjct: 363 HRPTEACLRCGRCVDVCPCGLSPVEMASLI--RRDKLEEVEKLQVMDCFSCGSCSYVCPS 420 Query: 405 VEPLQSAIKYFREEF 419 PL Y + E Sbjct: 421 HLPLVQYFNYAKGEI 435 >UniRef50_C9N0M8 Electron transport complex, RnfABCDGE type, C subunit n=2 Tax=Leptotrichia RepID=C9N0M8_9FUSO Length = 464 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 69/367 (18%), Positives = 128/367 (34%), Gaps = 75/367 (20%) Query: 41 ALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYK 100 L + +EI + +K+AG+ G GGA F T +K+ + + + L+ N E EP Sbjct: 145 DLKLIKKEEIFSIIKEAGIVGLGGAQFPTHVKYDIKFR----KVDTLIINGAECEPYLTS 200 Query: 101 DRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNI 160 D +M+ ++ G+ + L I + E E + Sbjct: 201 DYSVMKNHTKEIINGLKVIQKLLNPKEVVIGIEEENRELVEVIEE--------------- 245 Query: 161 MGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVE 220 MG F++ V Y G E LIN++ G + K P G V+NV Sbjct: 246 MGRKEKFQIKVKLLPTIYPQGSELQLINTVTGIKVR---KGELPLEKGV-----VVSNVS 297 Query: 221 TLCNVPAILANGVEWYQNISKSKDAGTKLMGFSG-RVKNPGLWELPFGTTAREILED--- 276 T+ + Y + K +++ SG +N G + + FGT I++ Sbjct: 298 TVKAI----------YDAFFEGKPLIERVVTISGEEARNIGNYRIKFGTPLYHIVKRLKI 347 Query: 277 ------YAGGMRDGLKF----KAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALA 326 GG G++ G +G FL+ +E + G + Sbjct: 348 TNEEKVIFGGPMMGIEVFDSRVPVIKGTSGILFLSTEE----IERNNCISCGYCVEACPM 403 Query: 327 MAVDHEINMVSLVRNLEEFFAR-----------ESCGWCTPCRDGLPWSVKILRALERGE 375 + +++ + ++C C C P V ++ +++ G+ Sbjct: 404 NLMP---------FEFADYYEKGKYEKMVKANIQNCIECGACEFVCPSRVPLMESIKTGK 454 Query: 376 GQPGDIE 382 ++E Sbjct: 455 AVLSEME 461 >UniRef50_B0PD32 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0PD32_9FIRM Length = 437 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 73/357 (20%), Positives = 116/357 (32%), Gaps = 63/357 (17%) Query: 49 EIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQL 108 E V +K++GL G GGAGF T +K + E + L+ NA E EP D + + Sbjct: 121 EFVQAIKESGLVGLGGAGFPTHIKLNPKNLSE---VDTLVVNAAECEPYITSDYRTIIER 177 Query: 109 PHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFE 168 P +++G+ + + I + +A LRR T D Sbjct: 178 PQDVLDGIEAIKKYVGITQVKIAIEDNKPQAIEMLRR----------------LTKDDSS 221 Query: 169 LFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAI 228 + V + Y G E GR PA +G V N+ T + Sbjct: 222 IEVCSLHAIYPKGAEKVAAYETTGRVIKEGM---LPADAGII-----VENITTTAFIGQY 273 Query: 229 LANGVEWYQNISKSKDAGTKLMGF-SGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKF 287 L G+ TK++ G + P P G +++ G R K Sbjct: 274 LRTGMPL----------ITKMLTVDGGAIAEPKNVIAPIGAHFSDVIAFCGGYKRPAKKL 323 Query: 288 KAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFA 347 GG L D + + + L A D +V Sbjct: 324 ---IMGGPMMGTLV---FDAA--YPVLKNNNALL------AFDESQTVVE---------P 360 Query: 348 RESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGA 404 C C C P+ + + R +E+ + +I L++L L C+ A Sbjct: 361 EHPCIRCGRCMQNCPYHL-MPRQIEKA-YESENIAMLQKLKVMLCMECGCCSFVCPA 415 >UniRef50_Q0AAG9 Electron transport complex, RnfABCDGE type, C subunit n=2 Tax=Chromatiales RepID=Q0AAG9_ALHEH Length = 515 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 77/382 (20%), Positives = 132/382 (34%), Gaps = 75/382 (19%) Query: 46 SPDEIV-NQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLL 104 +P ++ +V++AG+ G GGA F T +K + L+ N E + D L Sbjct: 123 TPARVLRARVREAGIVGLGGAAFPTAIKLNPP---SDTLPDTLIANGVECDTHITCDDRL 179 Query: 105 MEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTG 164 M + P +++G+ +A L R I + G+ EAA L + + Sbjct: 180 MRERPEQILDGVATAADMLNVVRIRIAVEGDKPEAARA---------LRDALAASGLADD 230 Query: 165 FDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCN 224 + V RY G E LI++L GRR P+ +NV T Sbjct: 231 GRRDWAVVDVPKRYPAGSERQLIHNLTGRRV--------PSDGLPKDVGVITSNVGTFAA 282 Query: 225 VPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRD 283 + + +G + +++ +G V+ P E GT E++ D+ GG D Sbjct: 283 IHRAIRHGEPLIR----------RIVTITGDGVRRPANVEARIGTPMAELI-DHCGGYHD 331 Query: 284 GLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLE 343 G+ + GS +GTA + ++ ++ L Sbjct: 332 GVY--------------------------QLVMGGSLMGTA---LLSDDVPLIKASNCLL 362 Query: 344 EFFARE--------SCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGK 395 E C C C + P + + + + D E + F Sbjct: 363 AATPSELPPAEPPMPCIRCGACAEACPERLA-PQQIYWHT-RARDYEHADDWGVFDCIEC 420 Query: 396 TFCAHAPGAVEPLQSAIKYFRE 417 CA + PL ++YFR Sbjct: 421 GACAWVCPSHIPL---VQYFRH 439 >UniRef50_A5EVI2 Electron transport complex protein, C subunit n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EVI2_DICNV Length = 535 Score = 164 bits (414), Expect = 8e-39, Method: Composition-based stats. Identities = 70/377 (18%), Positives = 120/377 (31%), Gaps = 73/377 (19%) Query: 30 RSKNGYEGARKALTGLS----PDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIR 85 +G + K L L +++ +V D G+ G GGAGF T K +L + Sbjct: 112 LQADGADHFCKPLPSLDERFPREQLRARVSDCGVVGLGGAGFPTARKLALAA-------K 164 Query: 86 YLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRR 145 +L+ NA E EP D + + + +V G +SA+ L + + +A L + Sbjct: 165 HLVINAAECEPYISCDDMQIREHAAQIVRGAQLSAYILSVDSIRFGIENDKPQAIAALEK 224 Query: 146 AIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPA 205 AIA+A D + + RY G L L R N Sbjct: 225 AIADAA--------------DPRISLTIIPARYPSGNSRQLFELLFNVRVN--------- 261 Query: 206 TSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSG-RVKNPGLWEL 264 A + +N T+ V Y ++ + + + SG + P ++ + Sbjct: 262 GKHAHDRGFICHNTATMKAV----------YDALTHGRPLLERYVTVSGSEIARPQVYRV 311 Query: 265 PFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTA 324 GT E++ G + G + E L+ + + K Sbjct: 312 RIGTPLTELIAQSGGTTPNSRLL-------IGGSMMGEPQLNTEV---GLTKT------- 354 Query: 325 LAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSV--KILRALERGEGQPGDIE 382 ++ L E + C C C D P + + L R + Sbjct: 355 -------TNCLLLLPETKAEPTSE--CIRCGRCSDACPMHLLPQQLYWYSRQQNSAALKN 405 Query: 383 TLEQLCRFLGPGKTFCA 399 C G + C Sbjct: 406 YRLFDCIECGICASVCP 422 >UniRef50_D1VUL2 Electron transport complex protein RnfC n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUL2_9FIRM Length = 446 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 77/377 (20%), Positives = 133/377 (35%), Gaps = 67/377 (17%) Query: 48 DEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQ 107 D+++ VKD G+ G GGAGF K K E+ + + N E EP D +M + Sbjct: 125 DDLIPFVKDMGIVGMGGAGFPLHAKL----KGENPPLDECIINGAECEPFLTCDHRIMLE 180 Query: 108 LPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDF 167 ++EG+ I +F Y+ + +A + I++ L Sbjct: 181 RTEEILEGLDIFSFFYNQKASYMAIEENKPDAIAKMEEVISKHPNWSHL----------- 229 Query: 168 ELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPA 227 V +Y G+ L ++ GR G + + NV T Sbjct: 230 --KVVGCQTKYPQGDSKRLSEAVIGRIVPQNG---VTNDVGLF-----LTNVGTTLAFSE 279 Query: 228 ILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLK 286 + G Y+ +++ SG +K P + GT EIL D+ GG+ + Sbjct: 280 AMVKGKPTYE----------RVITVSGSGIKEPKNILVKIGTPVGEIL-DFCGGVVEDY- 327 Query: 287 FKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFF 346 K GG T + +L+ P+ + + + + D E N + Sbjct: 328 -KEIICGGPMTGK-SVFNLNSPITKTT---------SGILVFTDKEENSIE--------- 367 Query: 347 ARESCGWCTPCRDGLPWSV---KILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPG 403 C C+ C D P ++ I A+ RG ++ E+L C+ Sbjct: 368 -ESPCIRCSRCVDHCPANINPTDINAAILRGR-----LDICEELHADQCMECGICSFVCP 421 Query: 404 AVEPLQSAIKYFREEFE 420 A L ++ K + E + Sbjct: 422 AKRHLSASTKLAKREIK 438 >UniRef50_A4SEA3 Electron transport complex, RnfABCDGE type, C subunit n=6 Tax=Chlorobiaceae RepID=A4SEA3_PROVI Length = 441 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 73/403 (18%), Positives = 143/403 (35%), Gaps = 77/403 (19%) Query: 1 MKNIIRTPET---HPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDA 57 +K++ P + L+ + D + W + G A GLS + I+ ++KDA Sbjct: 78 VKSVKSVPHPGGNYSLSVTITTDGEDAWAE------GLNTAPIDWKGLSKESIIERIKDA 131 Query: 58 GLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGML 117 G+ G GGAGF + +K S P I ++ N E EP D +M + +++G+ Sbjct: 132 GIVGMGGAGFPSSVKLSPPP---DKTIDTIILNGAECEPFLTADHRVMVEYAEEVIKGLE 188 Query: 118 ISAFAL-KAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAG 176 I + +I + + + K GTG + + T Sbjct: 189 IITSLFQGKAKPFIGIEANKPD-------------AIAAMKKAAKGTG----IEIVTLET 231 Query: 177 RYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWY 236 +Y G E LIN++ GR + K V+N+ T + Y Sbjct: 232 KYPQGAEKQLINAITGRTIE--------EGQLPFDKGCLVHNIGTAVAI----------Y 273 Query: 237 QNISKSKDAGTKLMGFSG-RVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGA 295 +S ++ +++ SG + + GT + + ++GG+ + K GG Sbjct: 274 DAVSCNRPLVERVLTVSGMEISSARNIRAVIGTRFSD-IAAFSGGISE--KTNQVITGGP 330 Query: 296 GTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINM--------------VSLVRN 341 ++ L++P+ + G + A + + L+ N Sbjct: 331 MMGR-SQFTLEVPITKTTSGIL--FINNAGLESSRERTCIRCGKCIDACPQGLEPWLLGN 387 Query: 342 LEEF--------FARESCGWCTPCRDGLPWSVKILRALERGEG 376 +F + +C C C P +++ ++ + Sbjct: 388 EAQFRRLDEAELYGLANCTECGSCTFVCPSKRELVHWIKYAKA 430 >UniRef50_C5BT99 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BT99_TERTT Length = 505 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 78/403 (19%), Positives = 129/403 (32%), Gaps = 71/403 (17%) Query: 20 DKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKD 79 D + W+D S + Y+ P + N+V +AG+ G GGA F +K + Sbjct: 109 DGEDRWIDTGVSGDPYDE--------EPLTLANRVANAGIVGMGGAIFPAAVKL---KQG 157 Query: 80 ESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEA 139 I+ +L N E EP D LM + +VEG + L+AY+ I + EA Sbjct: 158 TRHEIKTVLVNGSECEPFLTCDDRLMREKAEEIVEGARLIRHILRAYKAVIAIEDNKPEA 217 Query: 140 AVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRS 199 +R A + V Y G LI + GR Sbjct: 218 IAAMRAAAEPYGM----------------VEVEAVPSMYPMGSAKQLIQEITGREV---- 257 Query: 200 KPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFS-GRVKN 258 PA + + V+NV T+ + L G + ++++ + G + Sbjct: 258 ----PAGARSTSVGVLVHNVGTVYAIHQALTYG----------RPLVSRIVTVAGGAINR 303 Query: 259 PGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAG 318 P GT + +++ G +G K G L + Sbjct: 304 PRNVNALVGTPVQHLIDACGG--LNGDPAKLILGGPMMGVPLLSTQVP------------ 349 Query: 319 SRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQP 378 + G +A+ S C C C + P + L R Sbjct: 350 TIKGATGVLALAKHEVPRSEA---------SPCIRCASCVEACPMGLLPLEMAARSRADD 400 Query: 379 GDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEA 421 + L + G CA+ + PL +Y + E +A Sbjct: 401 FEGADDYGLRDCILCGS--CAYVCPSHIPLVQYFQYAKGEQDA 441 >UniRef50_C4LFE2 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=63 Tax=Gammaproteobacteria RepID=C4LFE2_TOLAT Length = 459 Score = 161 bits (407), Expect = 5e-38, Method: Composition-based stats. Identities = 78/333 (23%), Positives = 117/333 (35%), Gaps = 60/333 (18%) Query: 36 EGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEME 95 + R L L + + +V+ AG+ G GGAGF +K L NA E E Sbjct: 11 QQIRAVLQSLDLNTLPEKVRQAGIVGAGGAGFPAYVKLQ-------AKAEIYLVNAAECE 63 Query: 96 PGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGL 155 P D+ LM Q L+ G+ A A G I L+ +Y A L L Sbjct: 64 PMLKVDQQLMTQHASQLIRGLRYGMAATGAREGIIALKAKYQPAIAALE---------PL 114 Query: 156 LGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTC 215 L +N + +H Y G+E I GRR P + P Sbjct: 115 LPEN---------VRIHILPDVYPAGDEVITIWQATGRRVPPAALP--------ISIGVV 157 Query: 216 VNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILE 275 VNNV+TL N+ A L + + +G V+NP +P G T R++L Sbjct: 158 VNNVQTLLNLAAALE----------TETPVTHRTLTINGAVRNPMTVTVPLGVTLRDVLT 207 Query: 276 DYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINM 335 G A+ GG L LD P+ T + + + + Sbjct: 208 LAGGATIPDP---AFINGGPMMGKLVTD-LDAPVTKT----------TGGLLVLPEDHLI 253 Query: 336 VSLVRNLEE---FFARESCGWCTPCRDGLPWSV 365 + + ++ A+ C C C + P + Sbjct: 254 IQRRKRSDDAILNMAKTVCEQCGLCTELCPRHI 286 >UniRef50_A0LLS5 Electron transport complex, RnfABCDGE type, C subunit n=3 Tax=Deltaproteobacteria RepID=A0LLS5_SYNFM Length = 440 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 90/422 (21%), Positives = 140/422 (33%), Gaps = 81/422 (19%) Query: 1 MKNIIRTPETHPL-----TWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVK 55 +K+I +P + T R +P SP+E++ +++ Sbjct: 83 VKSIGASPHPVRVEAPSVTIRRDPQAEPKVFTPSE-----------WEHFSPEELLEKIR 131 Query: 56 DAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEG 115 +AGL G GGAGF T LK S P L+ NA E EP D M + PH ++ G Sbjct: 132 NAGLVGLGGAGFPTHLKLSPPPGTRLDK---LILNAAECEPYLNCDNRTMIEFPHEILTG 188 Query: 116 MLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGA 175 I L +I + EA L RA AE T D ++ V+ Sbjct: 189 ARIILRILGIKECHIGIENNKQEAIWVLSRAAAE------------STAPDCKISVNPLM 236 Query: 176 GRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEW 235 +Y G E LI ++ GRR P + V NV T + Sbjct: 237 VKYPQGSEKQLIQTITGRRVPYPGLP--------FDVGVMVINVGTAKTI---------- 278 Query: 236 YQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGG 294 + + K +++ SGR + P + GT +I+ G M + GG Sbjct: 279 HDAVVLEKPLYERVVTISGRAIARPANLMVRIGTRLSDIVTFLGGTMDN---LARIVVGG 335 Query: 295 AGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWC 354 F DLP+ + + + D EI+ C C Sbjct: 336 PMMGFSIPTT-DLPVMKTT---------SGVLFLSDDEIDS----------RPHGPCIRC 375 Query: 355 TPCRDGLPWSV---KILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSA 411 C + + ++ +E G + +T + CA A PL Sbjct: 376 GKCVEVCSMGLSPNEVGIYVEAGRAR----DTAQFGVFECFEC-GACAFVCPAKRPLVQF 430 Query: 412 IK 413 + Sbjct: 431 TR 432 >UniRef50_A9NEB0 NADH oxidoreductase complex RnfABCDGE type, C subunit n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NEB0_ACHLI Length = 432 Score = 160 bits (406), Expect = 8e-38, Method: Composition-based stats. Identities = 67/373 (17%), Positives = 130/373 (34%), Gaps = 63/373 (16%) Query: 42 LTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKD 101 + L+ ++ VN K+AGL G GG+GF T +K + I +L N E EP D Sbjct: 116 IDKLTKEDYVNITKEAGLVGLGGSGFPTYIKLN-----TKNKIDIILANGVECEPKLISD 170 Query: 102 RLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIM 161 +M + P L+ G++ + A+ A +G I ++ Y+E +R ++ Sbjct: 171 YEVMMESPDELIRGLIYAMKAVGAPKGVIAVKKRYVELVERIRFSLN------------- 217 Query: 162 GTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVET 221 + ++++ V Y G E I + G + + PA G NV T Sbjct: 218 -SYTEYDIKVVPVGNHYPQGWELEAIEAATGIKVP---QFKLPADYGII-----PFNVST 268 Query: 222 LCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGM 281 L ++ Y + + + SG ++ GT + +++ AGG Sbjct: 269 LQSI----------YHAVKFNLPVLERYFVLSGDGVVNKSFKARIGTPIQSLIQ-LAGGY 317 Query: 282 RDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRN 341 D K GG ++ + + L ++ ++ + Sbjct: 318 VDKAVPKTLIMGGPMMG------SNVTNDDIVTTHTATSLIVQNSLLLNED--------- 362 Query: 342 LEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHA 401 C C C P ++ ++ + + D + L+ L C+ Sbjct: 363 --------PCIHCASCVYSCPVQIQPVQIMNAVKA--NDKDFLKALSVNKCIECGLCSFV 412 Query: 402 PGAVEPLQSAIKY 414 + L ++ Sbjct: 413 CPSKIHLTDYMRE 425 >UniRef50_C6WYE0 Electron transport complex, RnfABCDGE type, C subunit n=2 Tax=Betaproteobacteria RepID=C6WYE0_METML Length = 637 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 66/369 (17%), Positives = 123/369 (33%), Gaps = 60/369 (16%) Query: 49 EIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQL 108 E++ ++ +G+ G GGA F T +K KD + I L+ NA E EP D +LM + Sbjct: 144 ELITSLRTSGIVGLGGATFPTHIKL---RKDGASAIHTLIINAAECEPYITCDDMLMRER 200 Query: 109 PHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFE 168 +++G+ I+ L+A I + AA + Sbjct: 201 ADEIIQGIAIAQHLLRATAVVIGIEDNKPAAAH----------------AMTAASQTLAN 244 Query: 169 LFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAI 228 + V T Y G+ LI+ L G G V NV T+ Sbjct: 245 VTVTTVPTLYPSGDARRLIHLLLGVEVP---HHKRSTEVGIQ-----VFNVATVLA---- 292 Query: 229 LANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFK 288 Y+ + + + ++++ +G V +P +E+ GT ++ G D Sbjct: 293 ------LYRYFTFGEPSVSRIVTVTGNVASPQNFEVLLGTPMPLLIAAAGGAKADTTH-- 344 Query: 289 AWQPGGAGTDF-LTEAHLDLPMEFESIGKAGSRLGT-------ALAMAVDHEINMVSLVR 340 + GG F L ++ + I A L + + V+L Sbjct: 345 -YVMGGPMMGFDLPSLNVPVTKAANCIIAASPNLFAPPPPAQPCIRCTRCADACPVNLQP 403 Query: 341 NLEEFFARE------------SCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLC 388 +FA+ C C C P ++ +++ + + ++ ++ Sbjct: 404 QELYWFAKSDNFEKARDYKLFDCIECGCCTYVCPSNIPLVQYYRYAKSEIIALDKAQEAA 463 Query: 389 RFLGPGKTF 397 F Sbjct: 464 DLARERNDF 472 >UniRef50_Q47GW4 Electron transport complex, RnfABCDGE type, C subunit n=2 Tax=Rhodocyclaceae RepID=Q47GW4_DECAR Length = 570 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 83/416 (19%), Positives = 132/416 (31%), Gaps = 79/416 (18%) Query: 8 PETHPL-----TWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGR 62 P HP T + D + W+D R Y P+ + +++AG+ G Sbjct: 88 PAAHPSGLTAATVVIEPDGEDRWID--RQPVDYASLE-------PEAVRELLREAGIVGL 138 Query: 63 GGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFA 122 GGA F T K + +++ + ++ N E EP D LLM + +V G + Sbjct: 139 GGAVFPTHGKLT---ASKTVPMEEMVINGAECEPYITCDDLLMRERAEEVVRGAGVFRDL 195 Query: 123 LKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGE 182 L+ + I + EA A +G F E V RY G Sbjct: 196 LRPKKVLIGIEDNKP-----------EAAAAMTAAIKALGEAFK-EFEVVVVPTRYPAGG 243 Query: 183 ETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKS 242 LI L G+ PA+ + NV T ++ ++ Sbjct: 244 AKQLIRVLTGKEV--------PASKRSTDLGVQCFNVATAYT----------AWRALAHG 285 Query: 243 KDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTE 302 + ++L+ +G V P WE+ GT E+L G + GG FL Sbjct: 286 EPVISRLVTITGNVGEPRNWEVLIGTPMDELLRI--GQPKPDTD--GIIMGGPMMGFL-- 339 Query: 303 AHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLP 362 +P + KA + L + C C C P Sbjct: 340 ----VPDTKAPVVKATNCLIAHSPTLFPPKPP-------------EMPCIRCGECARACP 382 Query: 363 WSVKILR--ALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFR 416 ++ R + E C G C+ + PL ++YFR Sbjct: 383 HELQPFEMYWFSRAKNFGKTQEYAIFDCIECG----CCSFVCPSRIPL---VQYFR 431 >UniRef50_A3WQG7 Electron transport complex protein RnfC n=1 Tax=Idiomarina baltica OS145 RepID=A3WQG7_9GAMM Length = 624 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 72/354 (20%), Positives = 117/354 (33%), Gaps = 71/354 (20%) Query: 67 FSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAY 126 F T K + + YL+ N E EP D LM + +V GM I A+ Sbjct: 153 FPTSQKL-----AQQKPVSYLIINGVECEPYICADDRLMREHARDIVLGMRILAYITGTD 207 Query: 127 RGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETAL 186 + + + EA ++R AIAE ++ + +Y G E L Sbjct: 208 KTLLAIEDNKPEAIDSMRAAIAEYD----------------DIELRIVPTKYPSGGEKQL 251 Query: 187 INSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAG 246 I L G P+ + NV T V + + K Sbjct: 252 IQLLTGHEV--------PSKQLPIEMGIIMQNVGTAFAVK----------EAVIDDKPLI 293 Query: 247 TKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHL 305 +++ +G ++ PG P GT +LE YAG + + + GG F Sbjct: 294 ERVVTLTGECIEQPGNVWSPLGTPVDALLE-YAGFKPE--QQQRVIMGGPMMGF------ 344 Query: 306 DLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSV 365 + TA+ + +V R L +C C C + P ++ Sbjct: 345 -------------TLPITAVPVIKTTNCILVPSTRELPPPGDEMACIRCGACAEVCPATL 391 Query: 366 --KILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFRE 417 + L+ L + + P E C G CA + PL + Y+R+ Sbjct: 392 QPQQLQWLAKAKDYPALEENNLFDCIECG----ACAFVCPSEIPL---VHYYRQ 438 >UniRef50_Q0VP39 Electron transport complex protein rnfC n=12 Tax=Gammaproteobacteria RepID=Q0VP39_ALCBS Length = 991 Score = 158 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 83/382 (21%), Positives = 133/382 (34%), Gaps = 65/382 (17%) Query: 41 ALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYK 100 T SP E+V+ ++ AG+ G GGAGF T +K +L + + L+ NA E EP Sbjct: 147 DFTEKSPAELVDIIRHAGIAGMGGAGFPTSIKVNL---GDHQRVEQLIINAVECEPYITA 203 Query: 101 DRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNI 160 D LM + +V G+ I + L R I + EA ++RA Sbjct: 204 DDRLMRERAEQIVTGIHILQYLLNPRRTLIGIEDNKPEAISAIKRA-------------- 249 Query: 161 MGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVE 220 ++ V +Y G E LI L G+ PA G NV Sbjct: 250 ---CKGCDIEVRVVPTKYPSGGEKQLIQLLTGKEVASGQ---LPAQVGV-----VCQNVG 298 Query: 221 TLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAG 279 T + + +G + +++ +G V PG +E+ GT R++L A Sbjct: 299 TAYAIKRAVCDG----------EPLISRVTTLTGDGVSQPGNYEVLLGTPVRDLL---AY 345 Query: 280 GMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSL- 338 G GL+ GG F L V +++ Sbjct: 346 GNLAGLEIGRLVMGGPMMGF--------------------TLHNPAVPVVKTTNCIIAAS 385 Query: 339 VRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFC 398 L E + C C C + P ++ + + L + D+E + C Sbjct: 386 PEELPEPPPEQPCIRCGSCAEVCPANL-LPQQLYW-HAKNDDLEKAQHHNLMDCIECGAC 443 Query: 399 AHAPGAVEPLQSAIKYFREEFE 420 A+ + PL +Y + E Sbjct: 444 AYVCPSHIPLVQYYRYAKAEVR 465 >UniRef50_Q6AIR8 Related to propanediol utilization protein (PduS) n=2 Tax=Desulfotalea psychrophila RepID=Q6AIR8_DESPS Length = 447 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 65/324 (20%), Positives = 108/324 (33%), Gaps = 56/324 (17%) Query: 45 LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLL 104 ++ D ++ + DAG+ G GGAGF +K+ + ++ N E EP + D+ + Sbjct: 3 MNKDSLLRSILDAGIVGEGGAGFPAHVKY-------DTQVDTVIANGCECEPLLHTDQHI 55 Query: 105 MEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTG 164 M +V M A RG I ++ +Y E A I GTG Sbjct: 56 MRTRAADIVVAMQAIVSVTGATRGVIGIKRKYTEIAKIFADCIE-------------GTG 102 Query: 165 FDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCN 224 L + Y G+E L+ + G+ P P V NV TL Sbjct: 103 ----LELVQLDNFYPAGDEQTLVYEVTGKTIPPLGLPK--------DVGAVVANVGTLAG 150 Query: 225 VPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDG 284 V + K++ +G V +P + +P GT E L G Sbjct: 151 VADAMK-----------GTPVTHKIVTVTGNVGSPAVIRVPLGTKLSECLAHCGGATIAD 199 Query: 285 LKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRN--- 341 + GG +D EF + + T + + + ++ Sbjct: 200 P---VYILGGPMMG----RMVDSAEEFAAKVVTKT---TGGLIILPRGHYLHTMASRDLQ 249 Query: 342 LEEFFARESCGWCTPCRDGLPWSV 365 + A +C C C + P + Sbjct: 250 SMQRQAATACIQCRLCTELCPRYL 273 >UniRef50_A5N6H2 RnfC related NADH dehydrogenase n=2 Tax=Clostridium kluyveri RepID=A5N6H2_CLOK5 Length = 442 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 66/346 (19%), Positives = 111/346 (32%), Gaps = 74/346 (21%) Query: 67 FSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAY 126 F T +K + ++Y + NA E EP D+ LM +V I +L A Sbjct: 20 FPTHVKLN-------TKVKYFIVNALECEPLLQSDKYLMRNHSDEIVGATEIIGKSLGAE 72 Query: 127 RGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETAL 186 + I L+ Y L +I + + + Y G+E L Sbjct: 73 KIVIGLKNVYYNEIDALTNSIK---------------KLNSSVELFLNRSFYPAGDEQIL 117 Query: 187 INSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAG 246 + + G+ P + P+T GA V+NV T+ NV L + Sbjct: 118 VYEVTGKTIAPGA---IPSTVGA-----VVSNVGTVFNVFEALK-----------DEPVT 158 Query: 247 TKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTD--FLTEAH 304 K + G V +P + ++P GT E +E G GG E Sbjct: 159 YKYVTVVGEVASPAIVKVPIGTKVTECIEKCGGATLGDY---VVIMGGPMMGKKISKEEA 215 Query: 305 LDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNL----EEFFARESCGWCTPCRDG 360 + + + + + + + V+ L A+ +C C C + Sbjct: 216 ENTVITKTN----------GGIIVIPKD-HYVAARERLTIEEMVHRAKAACEQCRYCTEL 264 Query: 361 LPWS--------VKILRALERGEGQPGDIETLEQLCRFLGPGKTFC 398 P KI+R + G D E L++ + C Sbjct: 265 CPRYQIGHPLHPHKIMRTMALGRN---DEEVLKEA--IMCCQCGVC 305 >UniRef50_D1AJ84 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AJ84_SEBTE Length = 444 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 74/331 (22%), Positives = 114/331 (34%), Gaps = 66/331 (19%) Query: 67 FSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAY 126 F T LK + + + N E EP D+ LM + + L++GM I A LKA Sbjct: 20 FPTHLKMT-------KEVGTFIVNGAECEPLLEVDKFLMREKTYELIKGMEIIAGNLKAA 72 Query: 127 RGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETAL 186 R + L+ +Y L I E D + + Y G+E + Sbjct: 73 RVVLGLKKKYKVEIKKLSETIKE---------------LDSNVELFLMDNFYPAGDEQIM 117 Query: 187 INSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAG 246 + + G+ PA T V+NV T+ NV + K Sbjct: 118 VKDITGK--------SIPAGGIPLDVDTVVSNVGTVINVYEAIE-----------EKPVT 158 Query: 247 TKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLD 306 K + G V NP + E+P GT+ E ++ G A GG + H D Sbjct: 159 KKYVSVLGEVNNPVMLEVPIGTSFEECIKRAGGVKIKNY---AVIEGGPMMGKIV--HRD 213 Query: 307 LPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARES---CGWCTPCRDGLPW 363 E I T + + + ++ E ES C C C D P Sbjct: 214 ELAEKAVIKT------TGALIILPEDHYVIKRKERPEAHILNESRAACIQCRMCTDMCPR 267 Query: 364 SV--------KILRALERGEGQPGDIETLEQ 386 + +++RA+ GE D E L++ Sbjct: 268 YLIGHKLRPHRVMRAMGMGE---QDEEILKE 295 >UniRef50_C5SAZ1 Electron transport complex, RnfABCDGE type, C subunit n=2 Tax=Proteobacteria RepID=C5SAZ1_CHRVI Length = 482 Score = 154 bits (389), Expect = 6e-36, Method: Composition-based stats. Identities = 78/375 (20%), Positives = 125/375 (33%), Gaps = 64/375 (17%) Query: 43 TGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDR 102 ++ +I+ V+DAGL G GG F + +K I +L N E EP D Sbjct: 151 EQMNVKDIIQAVQDAGLVGLGGGAFPSHVKMQPPA---GRVIHTVLVNGCECEPYLTCDH 207 Query: 103 LLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMG 162 +M + L+ G+ I+ A +A R I + ++A +LR + Sbjct: 208 RIMLEQTENLIRGIRIALRATRAERAIIGVEDNKLDAVSHLRARL--------------- 252 Query: 163 TGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETL 222 + V +Y G E LI +L PA G V NV TL Sbjct: 253 -PKHLPITVEAVRTKYPQGAEKMLITALLDAEVPAGG---LPADVGV-----AVFNVGTL 303 Query: 223 CNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGM 281 + ++ G + +++ SG VKNPG + +P GT R +L+ G Sbjct: 304 AQMGELVPRG----------QGLIERVVTVSGPAVKNPGNFLVPIGTPVRFLLDQV--GF 351 Query: 282 RDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRN 341 + GG + LD+P+ + + + +L R Sbjct: 352 KGP--LGQVILGGPMMGMAVAS-LDVPVTKSV---------SGVVALEPED---PALARR 396 Query: 342 LEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHA 401 C C C P S+ E + + + CA Sbjct: 397 QVY-----PCIKCGECLRACPVSLNPSMLGELAVAREYGVMAEQFNLDQCFEC-GCCAFV 450 Query: 402 PGAVEPLQSAIKYFR 416 + PL +YFR Sbjct: 451 CPSNIPLT---QYFR 462 >UniRef50_D1KBG6 Electron transport complex protein RnfC n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KBG6_9GAMM Length = 502 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 64/369 (17%), Positives = 117/369 (31%), Gaps = 79/369 (21%) Query: 50 IVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLP 109 ++ ++ +G+ G GGAGF T K + + L+ N E EPG D LM+ P Sbjct: 127 MIEYIRISGIVGLGGAGFPTHTKV-----ARAQDCHTLIINGTECEPGVMCDDALMQYYP 181 Query: 110 HLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFEL 169 ++ G+ I A R I + + EA +L + + + Sbjct: 182 REVIRGVEILLHICGASRAIIAVENDKQEAFNSL-----------------LMYNHNERI 224 Query: 170 FVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAIL 229 + +Y G E LI +L G P NV T + Sbjct: 225 SIVHIPTKYTSGAEKLLIKALLGVEVPSGGFAP--------DLGVVCQNVATTKAI---- 272 Query: 230 ANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREIL----------EDYA 278 + + +SK ++++ +G V+ P +E+ G++ ++ + Sbjct: 273 ------FDAVVESKPLVSRIVTVTGSGVEKPNNFEVRLGSSFDHVIAMSQPNKRSHDIRM 326 Query: 279 GGMRDGLKFK--AWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMV 336 GGM G+ K P E I G +++ V Sbjct: 327 GGMMMGVDVKDGKVPICKITNGIFVNDQSKKPAAQECIR-----CGAC------NQVCPV 375 Query: 337 SLVRNLEEFFARE------------SCGWCTPCRDGLPWSVKILRALERGEG---QPGDI 381 SL+ ++A+ C C C P + + + + D Sbjct: 376 SLLPQQLYWYAKSENTDKAMDYNLADCIECRCCDYVCPSHIPLAEYFSFAKALHRKTTDD 435 Query: 382 ETLEQLCRF 390 + + R Sbjct: 436 QYRTDIARE 444 >UniRef50_C6PYB3 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PYB3_9CLOT Length = 449 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 67/349 (19%), Positives = 113/349 (32%), Gaps = 69/349 (19%) Query: 67 FSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAY 126 F T K + + Y + N E EP D+ +M +V+ ++A Sbjct: 20 FPTDKKLNC-------KVEYFIINGLECEPLLQSDKYIMRNKSDEIVKAAEEIGKLVEAS 72 Query: 127 RGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETAL 186 I L+ EY + L+++I + + ++ Y G+E L Sbjct: 73 NIVIGLKKEYEKEIEALKKSID---------------KLNSNITLYLSDVFYPAGDEQIL 117 Query: 187 INSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAG 246 + + GR P P V+NV T+ N+ + K Sbjct: 118 VYEVTGRTIPPAGIP--------LNVGAVVSNVSTVFNIYEAME-----------DKPVM 158 Query: 247 TKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLD 306 K + G V P + ++P GT E +E G D A GG + L Sbjct: 159 YKYVTVIGEVGTPSIIKVPIGTPVLECIESCGGAKLDDY---AVIMGGPMMG---KRVLK 212 Query: 307 LPMEFESIGKAGSRLGTALAMAVDHEINMV---SLVRNLEEFFARESCGWCTPCRDGLPW 363 +E I K + + E + + + A+ +C C C D P Sbjct: 213 KDLESRFITKTD-----GAIIVLSSEHYLFNREKITIEHMKKQAKSACIQCHYCTDMCPR 267 Query: 364 SV--------KILRALERGEGQPGDIETLEQ--LCRFLGPG-KTFCAHA 401 ++ KI+R + G D E L++ +C G C Sbjct: 268 NLIGHPMHPHKIMRNVAFGV---EDEEALKETLICCECGVCEMYACPMG 313 >UniRef50_A1AVH8 Electron transport complex, RnfABCDGE type, C subunit n=2 Tax=sulfur-oxidizing symbionts RepID=A1AVH8_RUTMC Length = 497 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 64/371 (17%), Positives = 120/371 (32%), Gaps = 62/371 (16%) Query: 15 WRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWS 74 + D + W+D G + + + ++ ++ +G+ G GGAGF T +K Sbjct: 98 ITIESDDKDKWIDNEGC--GVDFLHSPVQTM-----IDCIQKSGIVGLGGAGFPTHVKLG 150 Query: 75 LMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRG 134 + + L+ N E EPG D LM+ P ++ G+ I + A R I + Sbjct: 151 KIKQ-----CHTLIINGTECEPGVMCDNALMQFYPREIIRGVEILLYICGAERAIIAIED 205 Query: 135 EYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRR 194 + A L + + + ++ + +Y G E LI +L G Sbjct: 206 DKQVAYQAL-----------------LMFNHNDRISINQISTKYTSGAEKLLIKALLGVE 248 Query: 195 ANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSG 254 A K NV T V + + K ++++ +G Sbjct: 249 --------ISTGGFAVDKGIVCQNVATTKAV----------FDAVVDHKPLVSRIVTVTG 290 Query: 255 RVKNPGLWELPFGTTAREIL----------EDYAGGMRDGLKFKAWQPGG--AGTDFLTE 302 P +E+ G + ++ + GGM G+ Q Sbjct: 291 SGVKPNNFEVRLGASFESLISIASPSQKAHDYRMGGMMMGVDVTDIQAPICKITNAIFVS 350 Query: 303 AHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEE--FFARESCGWCTPCRDG 360 H+ P E I + G + ++ + N+E+ + C C C Sbjct: 351 NHIQKPAIQECI-RCGKCSEVCPVKLLPQQLYWHTKSENIEKALNYNLADCIECACCDYV 409 Query: 361 LPWSVKILRAL 371 P + + Sbjct: 410 CPSHISLANYF 420 >UniRef50_C7NCF5 Electron transport complex, RnfABCDGE type, C subunit n=2 Tax=Fusobacteriaceae RepID=C7NCF5_LEPBD Length = 458 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 64/353 (18%), Positives = 117/353 (33%), Gaps = 75/353 (21%) Query: 55 KDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVE 114 ++AG+ GGA F T +K+ + K + + N E EP D LM+ ++ Sbjct: 153 REAGIVELGGAQFPTHIKYDIKFK----KVETFIINGAECEPYLTSDYSLMKNFTKEILN 208 Query: 115 GMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTG 174 G+ + L I + E E L + Sbjct: 209 GIKVIEKLLNPKEIVIGIENENSNLVQKFEELAKEEK---------------VNLKIKLL 253 Query: 175 AGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVE 234 Y G E LIN++ G++ K P G V+NV T+ + Sbjct: 254 PTIYPQGSELQLINTVTGKKVK---KGELPLNQGVI-----VSNVGTVKAI--------- 296 Query: 235 WYQNISKSKDAGTKLMGFSG-RVKNPGLWELPFGTTAREILEDYA---------GGMRDG 284 Y + K +++ SG KN G +++ GT I+ + GG G Sbjct: 297 -YDAFFEGKPLVERIITISGEEAKNIGNYKVKIGTPLYHIVNELGIKKEEKVIFGGPMMG 355 Query: 285 LKF----KAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVR 340 ++ G +G FL++ +E ES G + + Sbjct: 356 IEVFDSRIPVIKGTSGILFLSKEE----IERESCISCGYCVEACPMNLMP---------F 402 Query: 341 NLEEFFAR-----------ESCGWCTPCRDGLPWSVKILRALERGEGQPGDIE 382 +++ + ++C C C P V ++ +++ G+ ++E Sbjct: 403 EFADYYEKGKYEKMIKANIQNCIECGACEFVCPSRVPLIESIKNGKAILSEME 455 >UniRef50_C8NC21 Electron transport complex protein RnfC (Fragment) n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NC21_9GAMM Length = 630 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 82/439 (18%), Positives = 137/439 (31%), Gaps = 81/439 (18%) Query: 1 MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSP-----DEIVNQVK 55 ++ I PE HP + P + + +G + + LT L P D + ++ Sbjct: 92 IRAIEPRPEMHPA-----NQPVPHLI---LASDGKDESVPPLTALDPATTDADALRERIA 143 Query: 56 DAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEG 115 G+ G GGAGF T K L+ NA E EP D L + + ++ G Sbjct: 144 ACGIVGLGGAGFPTARKL-------GHPANTLVINAAECEPYITCDDLQIRENAADIIHG 196 Query: 116 MLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGA 175 I+A L A + + + +A + D L + + Sbjct: 197 AQIAAKILGAEHIHFGIEDDKP--------------QAIAALERAAADINDPRLKISSVP 242 Query: 176 GRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEW 235 RY G L L G R PA A +N T+ V Sbjct: 243 TRYPSGNTRQLFELLLGVRV--------PADQHASDYGLICHNSGTMKAV---------- 284 Query: 236 YQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGG 294 Y + + + + SG V P + + G R+++ G D + GG Sbjct: 285 YDAVIRGEPLTERYTTISGEGVNQPQVLRIRTGAPVRDLIAQAGGEKGDNR----YIIGG 340 Query: 295 AGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWC 354 + D P + K G+ L L+ C C Sbjct: 341 PMMGY-QIISADTP-----LQKTGNSL----------------LLLPAIAPAEESPCIRC 378 Query: 355 TPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKY 414 + C D P ++L Q + + L+Q + CA + PL ++ Sbjct: 379 SRCADACPM--ELLPQQLLWYSQSDEHKRLKQYRLYDCIECGICAAVCPSAIPLVQYYRH 436 Query: 415 FREEFEAGIKQPFSNTHLI 433 + A ++ + H Sbjct: 437 SKGAIRAADEKARAAEHAR 455 >UniRef50_A0AHN6 Complete genome n=18 Tax=Listeria RepID=A0AHN6_LISW6 Length = 454 Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats. Identities = 85/416 (20%), Positives = 139/416 (33%), Gaps = 81/416 (19%) Query: 45 LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLL 104 +S I+ ++KDAG+ G GGAGF T K+S + YL+ NA E EP D + Sbjct: 1 MSQMSILEKIKDAGVVGCGGAGFPTHAKFS-------GEVEYLIINAAECEPLLKTDHFV 53 Query: 105 MEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTG 164 M ++ + + + A I + Y E LR AI E Sbjct: 54 MRNHAVETIKAIEMVKSQVGAEFAVIATKRYYTEEIAALRLAITE--------------- 98 Query: 165 FDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCN 224 + + +H Y G+E ++ + GR P P V+NV T+ N Sbjct: 99 LNASVTIHEMDNVYPTGDEQVMVFEVTGRVVPPSGIP--------LMVGCIVSNVSTMWN 150 Query: 225 VPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDG 284 V + + + K + +G V P L ++P GT L G D Sbjct: 151 VYHAIQDDAPVVR----------KQLTVTGAVNEPKLLDVPIGTPFEVCLAAAGGTNLDE 200 Query: 285 LKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINM--VSLVRNL 342 F GG L + + + + K S L H+++ V + N Sbjct: 201 YLF---LDGGPMMGKLNDQS---TIAEKVVTKTTSGLIVTEDTGYLHKLHYQTVEQIFNE 254 Query: 343 EEFFARESCGWCTPCRDGLPWS--------VKILRALERGEG----QPGDIETLEQLCRF 390 + +C C+ C D P K++R E +P I +C Sbjct: 255 T----KSACIQCSLCSDLCPRKQLGHDIHPHKVMRHFAVAEDITDIKPDPIWEEAMICCE 310 Query: 391 LGPGKTF-CAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLINGIQPNLLKERW 445 G + C + +K+ L G++ K+ + Sbjct: 311 CGICEVIACPMGLS------------PRQVNIHVKKEL----LKQGVRYQTDKKEF 350 >UniRef50_A6FIW1 Electron transport complex protein RnfC n=2 Tax=Proteobacteria RepID=A6FIW1_9GAMM Length = 931 Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats. Identities = 67/337 (19%), Positives = 110/337 (32%), Gaps = 63/337 (18%) Query: 67 FSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAY 126 F T +K + + I +LL NA E EP D +LM + +++G+ I +K Sbjct: 153 FPTAVKLN-----DRQPIEFLLINAAECEPYITSDDVLMRERADDIIQGIEILRHMIKPA 207 Query: 127 RGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETAL 186 I + +AA L AI + ++ V +Y G E L Sbjct: 208 LCVIGIEDNKPDAAQALETAINK-------------INLSNDIIVRKVPTKYPNGGEKQL 254 Query: 187 INSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAG 246 I L G+ SK PA SG + NV T+ V + + + Sbjct: 255 IQMLTGKEI---SKGQIPAQSGI-----VMQNVGTVYAVKQAIID----------RQPLL 296 Query: 247 TKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDF-LTEAH 304 ++++ +G+ P + GT +L ++ D K A GG F L Sbjct: 297 SRIVTLTGKAFPQPRNVQALIGTPISALLSEF---HCDETKAAAIIYGGPMMGFTLPHTQ 353 Query: 305 LDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPW- 363 L ++ G + V EI V ++C C C + P Sbjct: 354 FSL-----------TKTGNCILTPVKDEIPQVREA---------DACIRCGECSEVCPVD 393 Query: 364 -SVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCA 399 + L + + + C G C Sbjct: 394 LLPQQLHWYSQAKDVKKLNDYNLMDCIECGACSYVCP 430 >UniRef50_C5BDE7 Electron transport complex protein rnfC n=215 Tax=Gammaproteobacteria RepID=RNFC_EDWI9 Length = 800 Score = 150 bits (380), Expect = 7e-35, Method: Composition-based stats. Identities = 84/420 (20%), Positives = 141/420 (33%), Gaps = 76/420 (18%) Query: 2 KNIIRTPETHP-LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLK 60 + + P P L L D+Q W G ++P +++ + AG+ Sbjct: 94 RQVTAHPSGLPELCISLVPDQQDCW--------GERHPLPDYRAMTPPALIDHIHQAGIA 145 Query: 61 GRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISA 120 G GGAGF T K + + I L+ NA E EP D LM + +V G I + Sbjct: 146 GLGGAGFPTAAKLN----GGADRINTLIINAAECEPYITADDRLMREHAAEIVSGCAILS 201 Query: 121 FALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYIC 180 L R I + +A LR A+ ++ + +Y Sbjct: 202 HILAPERVLIGIEDNKPQAIAALRHALQCHE----------------KIQLRVIPTKYPS 245 Query: 181 GEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNIS 240 G LI L G P + + NV T+ + + +G Sbjct: 246 GGAKQLIKILTGMEV--------PHGRHSASIGVLMQNVATVYAIKRAVIDG-------- 289 Query: 241 KSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDF 299 + +++ +G + PG GT + +L++ GG+ K GG F Sbjct: 290 --EPLIERVVTLTGEQMHRPGNVWAAIGTPVKHLLQN--GGLIAQNKHPMVIMGGPLMGF 345 Query: 300 LTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVR-NLEEFFARESCGWCTPCR 358 SRLG + + +++ R A + C C C Sbjct: 346 TL-----------------SRLGVPVVKITN---CILTPSRDEFSVPQAEQPCIRCGACA 385 Query: 359 DGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREE 418 D P + + +G+ D L + G CA+ + PL ++Y+R+E Sbjct: 386 DVCPARLLPQQLYWFSQGKEHDKARGYHLQECIECGA--CAYVCPSNIPL---VQYYRQE 440 >UniRef50_A9L0J9 Electron transport complex, RnfABCDGE type, C subunit n=16 Tax=Shewanella RepID=A9L0J9_SHEB9 Length = 888 Score = 150 bits (380), Expect = 7e-35, Method: Composition-based stats. Identities = 77/376 (20%), Positives = 130/376 (34%), Gaps = 63/376 (16%) Query: 42 LTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKD 101 L LS +IV++V+ AG+ G GGA F T +K + + I ++ N E EP D Sbjct: 126 LDDLSNQQIVDKVRSAGIAGMGGAAFPTHIKLNPVS-----EIDLVIINGVECEPYISAD 180 Query: 102 RLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIM 161 LM + ++ G+ I L R I + EAA ++ A+++ Sbjct: 181 DRLMREYSQDILAGIGIIHRLLTPKRIVIAIEDNKPEAAKAMQAAVSQCGLPA------- 233 Query: 162 GTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVET 221 + V +Y G E LI + GR + PA G V+NV T Sbjct: 234 -----GSIRVTVIPTKYPSGGEKQLIQIITGREVPSGA---IPAKLGI-----VVHNVGT 280 Query: 222 LCNVPAILANGVEWYQNISKSKDAGTKLMGFSG-RVKNPGLWELPFGTTAREILEDYAGG 280 + + G K +++ +G V PG + LP GT +L Sbjct: 281 AYAINQAVTQG----------KPLVERVVTVTGTNVGKPGNYWLPIGTPVDHVLTATEFT 330 Query: 281 MRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVR 340 K GG A++ +P+ GT + + Sbjct: 331 PEPDQK---VIIGGPMMGH-ALANIQVPILK----------GTNCILVPSS--------Q 368 Query: 341 NLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAH 400 + ++C C C P + + + + D L + G C++ Sbjct: 369 EIGSTPEEKACIRCGECATACPALLLPQQLFWHAKAEEYDKAASYNLKDCIECG--CCSY 426 Query: 401 APGAVEPLQSAIKYFR 416 + PL ++Y+R Sbjct: 427 VCPSDIPL---VEYYR 439 >UniRef50_B0MQ91 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MQ91_9FIRM Length = 432 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 66/365 (18%), Positives = 109/365 (29%), Gaps = 75/365 (20%) Query: 46 SPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLM 105 + ++ + V+++G G GGAGF T LK PK++ +L+ N E EP D Sbjct: 113 NREQFLQAVRNSGSIGLGGAGFPTSLKLGFDPKEK--QPDFLIINGAECEPYITSDYRCF 170 Query: 106 EQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGF 165 + ++EG+L+ L + I + +A + + + Sbjct: 171 MEEGEDVLEGVLLMLKYLGIPKCIIGIEKNKPKAIEKMTK---------------LCEKH 215 Query: 166 DFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNV 225 D + V Y G E LI S GR + P V N T + Sbjct: 216 D-NITVKPLKSSYPQGAEKTLIFSTTGRVVKEGTLP--------LASGCIVINSSTAAFI 266 Query: 226 PAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDG 284 + G+ + + + G VK P + +P G + EI+ Sbjct: 267 AQYIRTGMPLVK----------RRITVDGNIVKKPSNFIVPVGMSIGEIVYY-------- 308 Query: 285 LKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEE 344 D P + I G +G D + + + Sbjct: 309 -----------------AELSDKP---DRIILGGPMMGACA---FDPDYPLSKTNNAVLM 345 Query: 345 F-----FARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCA 399 F + C C C +L D LE+L L C+ Sbjct: 346 FADSPVYEPSECIRCGKCVKACSM--NLLPTELEHAFDMRDARRLEKLKVNLCVNCGACS 403 Query: 400 HAPGA 404 A Sbjct: 404 FVCPA 408 >UniRef50_B2CIR6 NADH:ubiquinone oxidoreductase NADH-binding 51kD subunit (Fragment) n=1 Tax=Aphanomyces astaci RepID=B2CIR6_9STRA Length = 172 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 51/139 (36%), Positives = 73/139 (52%), Gaps = 3/139 (2%) Query: 292 PGGAGTDFLTEAHL-DLPMEFESIG-KAGSRLGTALAMAVDHEINMVSLVRNLEEFFARE 349 PGG+ + EA ++ M+F+ + GS LGTA D ++MV +R L F+ E Sbjct: 1 PGGSSVPVMDEATCQNIHMDFDDLKNTGGSGLGTAAVTIFDKSVDMVGAIRRLSHFYTHE 60 Query: 350 SCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQ 409 SCG CTPCR+G W IL +E G + +I LE++ R + G T CA A P+Q Sbjct: 61 SCGQCTPCREGTGWMESILTRMETGNAELEEIPMLEEISRQI-EGHTICALGDAAAWPVQ 119 Query: 410 SAIKYFREEFEAGIKQPFS 428 IK F+ + I+ P S Sbjct: 120 GLIKRFKHKLVERIENPAS 138 >UniRef50_B1KU48 Respiratory-chain NADH dehydrogenase family protein n=10 Tax=Clostridiales RepID=B1KU48_CLOBM Length = 428 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 70/279 (25%), Positives = 118/279 (42%), Gaps = 49/279 (17%) Query: 46 SPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLM 105 S + I++ ++ AG+ G GGAGF T +K D +N ++ NA E EP + + Sbjct: 76 SSNNILDLIQAAGIVGMGGAGFPTHIKM-----DVDLNGGVVIANAVECEPLLAHNINQI 130 Query: 106 EQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGF 165 P L+ +G+ + A+ A +G ++ + +EA +L+ I Sbjct: 131 INEPELIYKGLCYAMKAVNASKGIFAIKSKNVEAISSLKNVIK----------------- 173 Query: 166 DFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNV 225 D + + Y GEE A+I + G+ +P S+ P A + V+NVETL + Sbjct: 174 DTNIEIVKLPDMYPMGEERAIIREVLGKLLDP-SQLPLEANA-------VVSNVETLAKI 225 Query: 226 PAILANGVEWYQNISKSKDAGTKLMGFSGRVKN----PGLWELPFGTTAREILEDYAGGM 281 + K +K + G++KN +P GTT RE++E AGG+ Sbjct: 226 AEAVE----------LKKPVISKNITVVGKLKNGLESQVFINVPIGTTVRELIE-AAGGI 274 Query: 282 RDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSR 320 ++ GG T A +D P+ S G + Sbjct: 275 DG--EYGEIIIGGPFTG--HSAKIDEPITKTSGGIIVTM 309 >UniRef50_A1SSX3 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SSX3_PSYIN Length = 857 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 88/405 (21%), Positives = 145/405 (35%), Gaps = 70/405 (17%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 L+ + D + Y+ Y+ AL +++ ++ +G+ G GG GF + LK Sbjct: 113 LSIVIETDGLDRSIA-YKKPQDYQTQPAAL-------LIDLIQQSGIIGMGGGGFPSHLK 164 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 S + N++ L+ NA E EP D LM++ L+ G+ I LK + Sbjct: 165 LS-----NAHNVKLLIINAIECEPYITADDRLMQEHADQLITGIEILQHILKPTLTIFAI 219 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 +A + AI +A E+ L KN L V A RY G E LI + G Sbjct: 220 EDNKPQAIAAINLAIKQAPES--LQKN---------LRVSIIATRYPSGGEKQLIEMITG 268 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGF 252 ++ P + NV T+ V + +G K ++++ Sbjct: 269 QQIPLGQHPT--------ALGIVMYNVGTVFAVKEAIIDG----------KPLISRIVTL 310 Query: 253 SGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEF 311 +G K G + GT + +LE Y + + GG F T H D+P+ Sbjct: 311 TGDAFKKKGNANVRIGTPIQYLLEQYG---LEKKHVQKLLIGGPMMGF-TITHTDIPVSK 366 Query: 312 ESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRAL 371 +V + E A C C C D P + + + L Sbjct: 367 SC------------------NCILVPTPEEMPEPPAEMPCIRCGECSDVCPAVL-LPQQL 407 Query: 372 ERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFR 416 + D E L++ CA + PL ++Y+R Sbjct: 408 LW-YSKSQDHEKLDEYNLPSCIECGACAFVCPSNIPL---VEYYR 448 >UniRef50_A7FHZ3 Electron transport complex protein rnfC n=42 Tax=Gammaproteobacteria RepID=RNFC_YERP3 Length = 698 Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats. Identities = 66/358 (18%), Positives = 118/358 (32%), Gaps = 76/358 (21%) Query: 67 FSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAY 126 F T K + I L+ NA E EP D LM++ ++ G+ I L+ Sbjct: 152 FPTASKL----QGGLNGIITLIINAAECEPYITADDRLMQEHADEVITGIHILRHLLQPQ 207 Query: 127 RGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETAL 186 + I + EA L+RA+ G++ ++ + +Y G L Sbjct: 208 QVLIGIEDNKPEAIAALQRALR--------GQD--------DIHLRVVPTKYPSGGAKQL 251 Query: 187 INSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAG 246 L G+ P + + NV T+ + + + + Sbjct: 252 TKILTGKEV--------PFGKHSSSIGVLMQNVGTVVAIK----------RAVIDDEPLI 293 Query: 247 TKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHL 305 +++ +G + +PG + GT +L+ ++ GG F + L Sbjct: 294 ERVVTLTGDALSSPGNFWARIGTPVLYLLKLAGFKPQNPP---MVIMGGPLMGFTLPS-L 349 Query: 306 DLPMEFES---IGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLP 362 D+P+ S + A + +G + +SC C C D P Sbjct: 350 DVPIVKISNCILAPAETEMG------LSEP---------------EQSCIRCGLCVDACP 388 Query: 363 W--SVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREE 418 + L RGE C G CA+ + PL ++Y+R+E Sbjct: 389 AGLLPQQLYWFSRGEEHEKARNHNLFDCIECG----ACAYVCPSNIPL---VQYYRQE 439 >UniRef50_B0P8J3 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8J3_9FIRM Length = 437 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 68/344 (19%), Positives = 105/344 (30%), Gaps = 66/344 (19%) Query: 67 FSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAY 126 F T +K + ++ N E EP D+ +ME +VEG+ + A Sbjct: 20 FPTHVKINCQAG-------TVIVNGAECEPLLRVDQQVMELYAAEVVEGLRLVMEQTGAK 72 Query: 127 RGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETAL 186 G I L+ Y A L AI + L +H Y G+E + Sbjct: 73 EGVIALKKHYEGAVKALGAAIEPFGQ----------------LRLHLLREYYPAGDEQQI 116 Query: 187 INSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAG 246 + + GR P V N TL NV A K Sbjct: 117 VYEVTGRVV--------PTGGLPLDVGAVVCNASTLLNVADAAA-----------GKKVV 157 Query: 247 TKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLD 306 K + G V+ P +++P G + RE+LE G + GG + + D Sbjct: 158 EKYVTVGGAVRTPRTFKVPVGISCRELLEAAGGTAEPCR----YIIGGPCMGRVVDDP-D 212 Query: 307 LPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEE-FFARESCGWCTPCRDGLPWSV 365 +P+ T +A + + L R C C+ C P + Sbjct: 213 VPVTKT----------TGGFLAFPVDHPLWKLREETLNMQLIRSVCCQCSMCTQMCPRNA 262 Query: 366 --------KILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHA 401 K +R + +G GD + C C Sbjct: 263 LGLNVQPHKAMRTIAQGTDLLGDANGVFSCCNCGVCTYYACNFG 306 >UniRef50_D2MNP9 Electron transport complex, RnfABCDGE type, C subunit n=2 Tax=Erysipelotrichaceae RepID=D2MNP9_9FIRM Length = 438 Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 77/360 (21%), Positives = 128/360 (35%), Gaps = 75/360 (20%) Query: 46 SPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLM 105 S +E+++ VK+AG+ G GGAGF T +K+ + I L+ NA E EP D M Sbjct: 119 SREELLDFVKNAGIMGLGGAGFPTYVKYMKVD-----GIDMLIINAVECEPFLTADYKAM 173 Query: 106 EQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGF 165 E+ G+L A + + ++ + E L A E+ Sbjct: 174 EENMDSFKLGVLALWKLSAAPKAVVAIKEDKKEMIAKLEEAFVESG-------------- 219 Query: 166 DFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNV 225 + + Y G E L L ++ R P+ G VNN T + Sbjct: 220 ---VEIKAVPDMYPMGYERTLAYQLT-KKNYDR----LPSEIGLI-----VNNANTAIAL 266 Query: 226 PAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDG 284 L G+ K + SG VK P +P GT + E+L+ GG+++G Sbjct: 267 GKALVTGMPI----------THKYVTVSGDAVKKPQTVYVPVGTISGELLKAV-GGVKEG 315 Query: 285 LKFKAWQPGGAGTD-FLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLE 343 ++ GG + + N V+++++++ Sbjct: 316 IEDILMINGGPMMGRAIPNNQWS----------------------ISQSTNGVTVMKHIK 353 Query: 344 EFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQL----CRFLGPGKTFCA 399 E +C C C D P ++ +R E + D + L +L C G C Sbjct: 354 E--EAINCLRCGACVDHCPMGLEPVRI--ADEHKVVDYDHLVKLRVTDCIECGLCTYVCP 409 >UniRef50_D1B7S1 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=2 Tax=cellular organisms RepID=D1B7S1_THEAS Length = 449 Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats. Identities = 78/366 (21%), Positives = 118/366 (32%), Gaps = 68/366 (18%) Query: 48 DEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQ 107 +++V+ V+DAG+ G GGAGF T +K +L N E EP D+ LM Sbjct: 2 EDLVSAVRDAGVVGAGGAGFPTHVKL-------GGGCESVLVNGAECEPLLEVDQQLMAL 54 Query: 108 LPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDF 167 P ++E + +L A G I ++ +Y EA L I G Sbjct: 55 YPSRVLEALDAVVRSLGAREGIIGIKDKYREALEALGGEI----------------GGFP 98 Query: 168 ELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPA 227 L +H Y G+E L+ GR P V NVETL N+ Sbjct: 99 SLRLHVLPNVYPAGDEQVLVYEATGRIV--------PEGGIPLEVGVVVLNVETLLNIWG 150 Query: 228 ILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKF 287 + K + G V P +P G + E++ G Sbjct: 151 AMR-----------GIPVTEKYLTVCGEVHRPATVRVPLGVSFGEVVAAVGGSPLKDF-- 197 Query: 288 KAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEE--- 344 GG + +D P+ T + + + +V Sbjct: 198 -VVIDGGPMMGRVVRR-MDEPVTKT----------TKGLIVLPPDHPLVVAKERDMRSMM 245 Query: 345 FFARESCGWCTPCRDGLPWSV--------KILRALERGEGQPGDIETLEQ-LCRFLGPGK 395 A+ +C C C D P + K++R + GD E LC G + Sbjct: 246 SLAKTACCHCMLCTDLCPRYLLGHRLRPDKLMRLAAYNDTCEGDAAATEAFLCCECGMCE 305 Query: 396 TFCAHA 401 C Sbjct: 306 VACVMG 311 >UniRef50_A6NT39 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NT39_9BACE Length = 454 Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats. Identities = 71/359 (19%), Positives = 111/359 (30%), Gaps = 71/359 (19%) Query: 49 EIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQL 108 E+++ V+ +GL G GGAGF T +K + + L+ N E EP D + M Sbjct: 142 ELLDAVRKSGLVGLGGAGFPTWVKLNAT-------VDRLVINGSECEPYCTVDYIAMRDY 194 Query: 109 PHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFE 168 + EG+ I L + + ++ G G D Sbjct: 195 AADMAEGVRIVKTLLGIEKAIVGVK-------------------HPPKGLEDAFKGMD-G 234 Query: 169 LFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAI 228 + + Y G E LI+ G R P K P A V NV T + Sbjct: 235 VEIKQLREYYPVGAEKMLIHETTG-RVVPGGKLPKDAG-------CIVLNVNTAAFIARY 286 Query: 229 LANGVEWYQNISKSKDAGTKLMGFSG-RVKNPGLWELPFGTTAREILEDYAGGMRDGLKF 287 L G+ +K + G V P + P GT ++ G + K Sbjct: 287 LRTGMPLV----------SKTVSVDGSAVNTPSVITAPIGTPVGDLFAAAGGFKGEPAKI 336 Query: 288 KAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFA 347 A GG LD P+ +A++ + A Sbjct: 337 FA---GGPMMGIALPD-LDFPL----------LWNNNGFVALNQKD---------AAKPA 373 Query: 348 RESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVE 406 +C C C D P ++ + D+E L + L C++ A Sbjct: 374 TTACIRCGRCVDHCPMNLMAFEI--SKAYEQRDVEWLRSIRADLCIECGCCSYVCPARR 430 >UniRef50_A6VVJ2 Electron transport complex, RnfABCDGE type, C subunit n=6 Tax=Gammaproteobacteria RepID=A6VVJ2_MARMS Length = 981 Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats. Identities = 60/350 (17%), Positives = 109/350 (31%), Gaps = 63/350 (18%) Query: 67 FSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAY 126 F T +K + + + NA E EP D +L+ + LV G+ + ++A Sbjct: 146 FPTQVKLQ---GAHKNPLTHFIINAAECEPYITADDMLIREKTLELVLGIEMLQHLVEAD 202 Query: 127 RGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETAL 186 I + A L+ + + + ++ + +Y G E L Sbjct: 203 NVIIGIEDNKPTAIAALKTVLTQR---------------NSKIQIAVVPTKYPSGGEKQL 247 Query: 187 INSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAG 246 I L G+ +PA G NV T V + G K Sbjct: 248 IQLLTGKEVPSGQ---YPADIGV-----LCQNVGTCVAVHDAITQG----------KPLI 289 Query: 247 TKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHL 305 ++ +G +K+P E+ GT +LE + K GG + Sbjct: 290 SRFTTLTGDALKSPQNVEVLLGTPVEHLLEYA---DSEPKKLSRLIMGGPMMGY------ 340 Query: 306 DLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFA-RESCGWCTPCRDGLPWS 364 L +A V +++ + A ++C C C P S Sbjct: 341 --------------TLDSAAVPIVKTSNCILAASKKELPPPAPEQACIRCGMCEQACPAS 386 Query: 365 VKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKY 414 + + L + Q + L + G C++ + PL ++ Sbjct: 387 LLPQQLLWFSKSQEFEKAEHHNLFDCIECGA--CSYVCPSSIPLVQYYRH 434 >UniRef50_Q482U5 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Colwellia psychrerythraea 34H RepID=Q482U5_COLP3 Length = 788 Score = 144 bits (362), Expect = 9e-33, Method: Composition-based stats. Identities = 84/398 (21%), Positives = 143/398 (35%), Gaps = 74/398 (18%) Query: 29 YRSKNGYEGARK-----ALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMN 83 + +G + RK L LS EIV ++ +AG+ G GGAGF T +K S P + Sbjct: 111 FLDVDGEDTWRKRNVCEDLEQLSNHEIVKKIANAGIAGMGGAGFPTHIKVSSKP-----D 165 Query: 84 IRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNL 143 I++L+ N E EP D LLM + + +V+G+ I L I + +A L Sbjct: 166 IKFLIINGAECEPYITADDLLMMEQSNAIVDGIKILDRLLTPTVILIGIEANKPKAIKAL 225 Query: 144 RRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPF 203 ++A A ++ V +Y G E L+ L G+ Sbjct: 226 QKATAAIE----------------KIKVCIVPTKYPTGGEKQLVQILTGQEVK------- 262 Query: 204 PATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSG-RVKNPGLW 262 + + N+ T + + + + +++ +G + P Sbjct: 263 -SGRLPIHDGIVMQNIATCFAINEAVRHDTPLIR----------RVVTVTGQALNKPQNV 311 Query: 263 ELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLG 322 GT +LE + + K + GG F + L +P+ + Sbjct: 312 WALLGTPINFLLEQCSVEGIENQK-QPVIMGGPMMGFSVSSEL-VPI-----------VK 358 Query: 323 TALAMAVDHEINMVSLVRNLEEFFARES----CGWCTPCRDGLPWSVKILRALERGEGQP 378 T+ + V + M S F +ES C C C D P ++L + + Sbjct: 359 TSNCILVPSKKEMPSA-------FEKESNEVECIRCGQCSDVCPS--QLLPQELQWSAKA 409 Query: 379 GDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFR 416 D LE+L CA+ + PL + Y+R Sbjct: 410 KDYSQLEKLNLRDCIDCGACAYVCPSQIPL---VHYYR 444 >UniRef50_B1ZMR0 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=2 Tax=Bacteria RepID=B1ZMR0_OPITP Length = 441 Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 60/302 (19%), Positives = 98/302 (32%), Gaps = 60/302 (19%) Query: 67 FSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAY 126 F +K + ++ N E EP +KD +ME+ LV G+ ++ A+ A Sbjct: 20 FPAHIKL-------AGKADVVIANGAECEPLLHKDAAVMERNARDLVTGLQLAMEAVGAT 72 Query: 127 RGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETAL 186 G + L+ + A + A+ EA + +H Y G+E L Sbjct: 73 TGIVGLKAKNQHA----QEAVTEACRGT-------------TIRIHLLGDYYPAGDEYDL 115 Query: 187 INSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAG 246 + + GR P P V+NVETL N+ A + Sbjct: 116 VYTTTGRLIPPAGIP--------LNVGAVVSNVETLVNIAAAAE-----------GRPVT 156 Query: 247 TKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLD 306 K + +G V P +P GTT R L+ G G T LD Sbjct: 157 HKTLTIAGAVAAPATLTVPLGTTLRACLDAAGG----PTVLDPVLCIGGMMMGETTTDLD 212 Query: 307 LPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRN---LEEFFARESCGWCTPCRDGLPW 363 P+ T + + ++ L+ + +C C C + P Sbjct: 213 RPVTKT----------TGGVIVLPRSHRIIQRKLKPATLQHAIGKSACDQCRYCTEYCPR 262 Query: 364 SV 365 + Sbjct: 263 FL 264 >UniRef50_B7CAH2 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAH2_9FIRM Length = 436 Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 71/345 (20%), Positives = 120/345 (34%), Gaps = 57/345 (16%) Query: 46 SPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLM 105 + +E V+ VK+AG+ G GGAGF T +K+ + + Y+L NA E EP D + Sbjct: 126 TREECVDFVKNAGIVGLGGAGFPTYVKYM-----KPDGVDYVLINAVECEPYITADYRSV 180 Query: 106 EQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGF 165 LV G I +A YI ++ + + ++ A+ +A Sbjct: 181 MDDAQDLVTGAKIMKKMAEAKTVYICIKESHPDLIEKVKSALQDAAG------------- 227 Query: 166 DFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNV 225 + V+ Y G E L+ + + PA +GA + N + + Sbjct: 228 ---VEVYPVPDVYPMGWERVLVREVLHKEY-----GGLPAEAGAI-----IGNASSAIAI 274 Query: 226 PAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDG 284 G Q K + SG VK+P +P G EI+E G +D Sbjct: 275 AKAFEKGEAITQ----------KNLTVSGECVKDPHNVCVPVGMPVSEIIEACGGYTQDT 324 Query: 285 LKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGS-------RLGTALAMAVDHEINMVS 337 ++ + P T +D M ++ A + R G + V Sbjct: 325 VRLISGGPMMGKTIVNDMFVVDRAMNALTVLPAANDDAIACLRCGKCSDHC-PSGLQPVR 383 Query: 338 LVRNLEEFFARE-------SCGWCTPCRDGLPWSVKILRALERGE 375 + L+ E SC C C P + + + + + Sbjct: 384 ITAALKANDVDEMSKRGVMSCIECGMCTYICPSHIDVTENVRKAK 428 >UniRef50_C9NKP5 Oxidoreductase (Fragment) n=9 Tax=Streptomyces RepID=C9NKP5_9ACTO Length = 330 Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 7/227 (3%) Query: 205 ATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWEL 264 A SG G PT ++N ET + G Y + + + GT L+ SG V P + E+ Sbjct: 3 AESGVAGAPTLLSNAETYAQLAVAARLGPRRYGHTGLADEPGTVLLTVSGAVARPMVVEV 62 Query: 265 PFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHL-DLPMEFESIGKAGSRLGT 323 P G R +L+ + GG +++ L D + S+ G LG Sbjct: 63 PTGVPLRYVLQLAGAPPLP----QGVLTGGYHGNWIDSTALHDAVVSRASLAAVGGALGA 118 Query: 324 ALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIET 383 + + E + + + A E+ G C PC+ GLP + L + G G P +E Sbjct: 119 GAVLPIGPETCPIGESLRIANWLAAETAGQCGPCKLGLPAAAGGLSDVLNG-GGPAALEA 177 Query: 384 LEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNT 430 L ++ + + G+ C H G+ L S + F ++ A + Sbjct: 178 LREVTQAV-KGRGACKHPDGSARFLSSTLSAFTDDLAAHVLDGGCGR 223 >UniRef50_C1D6V6 Electron transport complex protein RnfC n=2 Tax=Betaproteobacteria RepID=C1D6V6_LARHH Length = 620 Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats. Identities = 72/387 (18%), Positives = 122/387 (31%), Gaps = 68/387 (17%) Query: 41 ALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYK 100 A + + N + D G+ G GGA F TGLK + + + L+ N E EP Sbjct: 117 AWQQMPAATLQNALADQGVVGLGGAVFPTGLKVA------AEGLETLVINGAECEPYITC 170 Query: 101 DRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNI 160 D LM + +V+G+ + A ++ + + E + + Sbjct: 171 DDRLMRERAADIVKGIRLLAERMQPREVLVGIEDNKPE-------------AIAAMMAAV 217 Query: 161 MGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVE 220 GTG + V RY G LI L G+ P + NV Sbjct: 218 AGTG----IEVVPVPTRYPGGGAKQLIRVLTGKEV--------PHGRRSTEFGVQCFNVA 265 Query: 221 TLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGG 280 T V L G+ ++L+ +G V PG E GT A +++ G Sbjct: 266 TAYTVWQALECGIPIV----------SRLVTLTGAVTRPGNVEALIGTPADWLMQSA--G 313 Query: 281 MRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVR 340 + G GG F+ G + A + ++ R Sbjct: 314 LLAGHD--GIIMGGPMMGFVLPDA-----------------GAGITKATN---CLIGKTR 351 Query: 341 NLEEFF-ARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCA 399 L A C C C P ++ + + + L + G C+ Sbjct: 352 QLFPPRPAALPCIRCGECAKACPTDLQPMDLYWFAKSRQTGRAQEHHLFDCIECGA--CS 409 Query: 400 HAPGAVEPLQSAIKYFREEFEAGIKQP 426 + + PL ++ + + A + Sbjct: 410 YVCPSQIPLVDYYRFAKSDIWAAERDK 436 >UniRef50_B8G1Q5 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=4 Tax=Clostridiales RepID=B8G1Q5_DESHD Length = 451 Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats. Identities = 85/382 (22%), Positives = 130/382 (34%), Gaps = 82/382 (21%) Query: 47 PDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLME 106 +E++ ++K AG+ G GGAGF T +K + R +L N E EP D+ LM Sbjct: 2 REELIEKIKKAGVVGAGGAGFPTHVKVNS-------KARTVLVNGAECEPLLRVDQQLMA 54 Query: 107 QLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFD 166 +V G+ + A G I L+ +Y +A L + I+ Sbjct: 55 GQASKVVMGLELVMSVTGAKEGIISLKHKYHDAISALEKEIS-----------------G 97 Query: 167 FELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVP 226 + +H Y G+E + GR P+ P V+NVETL N Sbjct: 98 KPIRIHILDDFYPAGDEHVTVYESTGRLV-PQGSIPLKVD-------CVVHNVETLLNTV 149 Query: 227 AILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYA----GGMR 282 +A + + +G V P LP GT E L GGM+ Sbjct: 150 DAVA-----------DQPVTDTYLTITGEVNQPLTLRLPIGTAISEALAMAGYHDSGGMQ 198 Query: 283 DGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSL---- 338 GG + L P+ T + + E ++ L Sbjct: 199 -------VIEGGPMMGKIVAD-LHQPITKT----------TKGLIVLPREHPLLRLKTLP 240 Query: 339 VRNLEEFFARESCGWCTPCRDGLPWSV--------KILRALERGEGQPGDIETLEQLCRF 390 + +R SC C C D P + KI+R + G+GQ ++ + C Sbjct: 241 ADKVLR-QSRVSCVQCRFCTDLCPRYLLGHQLEPHKIMRMVNYGQGQEETMK-MAFACSE 298 Query: 391 LGPG---KTFCAHAPGAVEPLQ 409 G +P AV L Sbjct: 299 CGVCEQYACIMGLSPRAVNALL 320 >UniRef50_A1U014 Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit n=3 Tax=Gammaproteobacteria RepID=A1U014_MARAV Length = 449 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 55/302 (18%), Positives = 102/302 (33%), Gaps = 61/302 (20%) Query: 67 FSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAY 126 F + +K L+ N E EP YKD+ ++++ L++GM + A Sbjct: 27 FPSYVKIQ-------ARADVLIANGAECEPLLYKDQTVIQRFSAELLQGMALLMEQTGAS 79 Query: 127 RGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETAL 186 RG I ++ ++ ++ ++ LL N + + Y G+E L Sbjct: 80 RGVIAIKEKHQDSISHIE---------PLLPGN---------IELKQMRNTYPAGDEYEL 121 Query: 187 INSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAG 246 + + G R PA V NVETL N+ Sbjct: 122 VYEITGNR--------IPAGGLPKDIGVLVQNVETLVNIARAAQ-----------GHPVT 162 Query: 247 TKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLD 306 ++ G V++P LP G +++ D GGA + + +D Sbjct: 163 RTMITVHGEVEHPFTAWLPIGMRFADVISLAGAITCDDP---VVIDGGAMMGQVVDD-MD 218 Query: 307 LPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFA---RESCGWCTPCRDGLPW 363 P+ ++ + + + N+V E+ + + C CT C + P Sbjct: 219 TPISAV----------SSGLLVLPRDTNLVRRRSETEQQYKRIGKSGCDQCTLCTEMCPR 268 Query: 364 SV 365 + Sbjct: 269 YL 270 >UniRef50_B8FDM6 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=4 Tax=Deltaproteobacteria RepID=B8FDM6_DESAA Length = 448 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 63/301 (20%), Positives = 106/301 (35%), Gaps = 55/301 (18%) Query: 67 FSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAY 126 F T +K +L N EP D LME +++G+ + A+ A Sbjct: 22 FPTHVKI-------DAKADTVLINGASCEPLLCSDIHLMETRSDDIIKGLGLVMDAVGAE 74 Query: 127 RGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETAL 186 +G I ++ ++ A L + +A+A G G+N + V Y G+E L Sbjct: 75 KGMIGIKAKHQNAVAILEQKVADAGLTG--GRN---------ISVFKMKDFYPGGDEHVL 123 Query: 187 INSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAG 246 +N G R P+ P V+N E++ N+ + K Sbjct: 124 VNEATG-RIVPQGGIPL-------EVGVVVSNSESVFNMSQAME-----------DKPVT 164 Query: 247 TKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLD 306 + + +G V P + +P GT +L+ G R K GG + Sbjct: 165 HRTLNVAGEVMKPIVVRVPVGTPVSHVLKLAGGVRRPDGK---VIDGGPMMGRVL----- 216 Query: 307 LPMEFESIGKAGSRLGTALAMAVDHEINM----VSLVRNLEEFFARESCGWCTPCRDGLP 362 + KA T+ + + E N+ V+ + L R +C C+ C D P Sbjct: 217 -----DDPEKAFVTKTTSGLIVLPAEHNVIRGKVTDINQLMR-VTRLACCQCSLCTDLCP 270 Query: 363 W 363 Sbjct: 271 R 271 >UniRef50_C6LEW4 PduS protein n=3 Tax=Bacteria RepID=C6LEW4_9FIRM Length = 449 Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 74/379 (19%), Positives = 120/379 (31%), Gaps = 70/379 (18%) Query: 67 FSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAY 126 F T +K + + Y + NA E EP D+ L +V + + A L A Sbjct: 20 FPTHVKLN-------TKVEYFIVNAAECEPLIETDKYLCRTWAERIVRTIPVIADFLGAS 72 Query: 127 RGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETAL 186 + I L+ +Y L++A+ ++ + Y G+E L Sbjct: 73 KKVIALKAKYEREIAALKQAVETCGS---------------DVEIFGLGYFYPAGDEQTL 117 Query: 187 INSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAG 246 I + GR R P+ G V+NV T+ N+ L K Sbjct: 118 IQQVTGRSVPERG---LPSDVG-----CVVDNVGTVLNIADALE-----------GKPVT 158 Query: 247 TKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLD 306 K + G V+ L +P GT E +++ + D A GG Sbjct: 159 EKYLSVVGEVRQTLLLRVPVGTPVLECVKEAQPLISDY----ALIMGGPMMG-------K 207 Query: 307 LPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARES---CGWCTPCRDGLPW 363 E ++ A T M + E + E R++ C C C D P Sbjct: 208 QLTERTAMEAAVVTKTTGNIMVLPKEHYLFKRAALPMETIKRQTRSACIQCRMCTDLCPR 267 Query: 364 SV--------KILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPL----QSA 411 + ++R L R E D E L+ C P+ + Sbjct: 268 YLIGHQMRPNLVMRNLWREETAKDDEEFLKMFGDAANCCS--CGVCEMFACPMGLSPRKV 325 Query: 412 IKYFREEFEAG-IKQPFSN 429 +Y + E I+ P + Sbjct: 326 NEYMKGELRKRGIQVPKNP 344 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P31979 NADH-quinone oxidoreductase subunit F n=44 Tax=E... 553 e-156 UniRef50_C8W2X2 NADH dehydrogenase (Quinone) n=24 Tax=Bacteria R... 527 e-148 UniRef50_B0TIC6 NADH dehydrogenase conserved domain protein, nuo... 523 e-147 UniRef50_A7HLR0 NADH dehydrogenase (Quinone) n=58 Tax=Bacteria R... 520 e-146 UniRef50_B1L9S5 NADH dehydrogenase (Quinone) n=14 Tax=Bacteria R... 516 e-145 UniRef50_C6A4M4 NADH:ubiquinone oxidoreductase, NADH-binding sub... 507 e-142 UniRef50_A8MJ02 NADH dehydrogenase (Quinone) n=4 Tax=Bacteria Re... 499 e-140 UniRef50_Q9I0J7 NADH-quinone oxidoreductase subunit F n=193 Tax=... 497 e-139 UniRef50_A3DCA0 NADH dehydrogenase (Quinone) n=10 Tax=cellular o... 496 e-139 UniRef50_C0GLW6 NADH dehydrogenase (Quinone) n=2 Tax=Desulfonatr... 492 e-138 UniRef50_D1CCD0 NADH dehydrogenase (Quinone) n=1 Tax=Thermobacul... 490 e-137 UniRef50_Q2LYA9 NADH:ubiquinone oxidoreductase, NADH-binding sub... 490 e-137 UniRef50_Q1DDC8 NADH dehydrogenase I, F subunit n=5 Tax=Bacteria... 483 e-135 UniRef50_Q608Y1 NADH dehydrogenase I, F subunit n=4 Tax=Gammapro... 482 e-135 UniRef50_B1ZTP3 NADH dehydrogenase (Quinone) n=1 Tax=Opitutus te... 482 e-135 UniRef50_Q39TW5 Respiratory-chain NADH dehydrogenase domain, 51 ... 481 e-134 UniRef50_D0LDB1 NADH-quinone oxidoreductase, F subunit n=45 Tax=... 481 e-134 UniRef50_B8FFJ2 Respiratory-chain NADH dehydrogenase domain 51 k... 481 e-134 UniRef50_Q56222 NADH-quinone oxidoreductase subunit 1 n=16 Tax=B... 481 e-134 UniRef50_O27592 NADP-reducing hydrogenase, subunit C n=5 Tax=cel... 481 e-134 UniRef50_Q39QB2 NADH dehydrogenase I, F subunit n=5 Tax=Bacteria... 481 e-134 UniRef50_Q9XAQ9 NADH-quinone oxidoreductase subunit F n=56 Tax=B... 477 e-133 UniRef50_C0GLX1 NADH dehydrogenase (Quinone) n=1 Tax=Desulfonatr... 472 e-131 UniRef50_A7NPE5 NADH-quinone oxidoreductase, F subunit n=9 Tax=B... 471 e-131 UniRef50_A6FCN1 NuoF2 NADH I CHAIN F n=1 Tax=Moritella sp. PE36 ... 469 e-131 UniRef50_C7NU21 NADH dehydrogenase (Quinone) n=5 Tax=cellular or... 467 e-130 UniRef50_B6ALB9 NADH dehydrogenase (Quinone) n=3 Tax=Leptospiril... 466 e-130 UniRef50_A5FKK2 NADH dehydrogenase subunit F n=18 Tax=Bacteria R... 464 e-129 UniRef50_Q2LS97 NADH-quinone oxidoreductase chain F n=2 Tax=Synt... 464 e-129 UniRef50_B2KCG6 NADH dehydrogenase (Quinone) n=3 Tax=Bacteria Re... 464 e-129 UniRef50_C1F9D7 NADH dehydrogenase I, F subunit n=1 Tax=Acidobac... 462 e-128 UniRef50_Q2FP97 NADH dehydrogenase (Quinone) n=2 Tax=Methanomicr... 460 e-128 UniRef50_C1A8Y9 NADH-quinone oxidoreductase chain F n=1 Tax=Gemm... 460 e-128 UniRef50_Q9RU92 NADH dehydrogenase I, F subunit n=1 Tax=Deinococ... 458 e-127 UniRef50_Q3A639 NADH:ubiquinone oxidoreductase, NADH-binding (51... 458 e-127 UniRef50_A5FXJ6 NADH dehydrogenase (Quinone) n=11 Tax=Proteobact... 456 e-127 UniRef50_A7HJL0 NADH dehydrogenase (Quinone) n=5 Tax=Bacteria Re... 456 e-127 UniRef50_B5IPC7 Formate dehydrogenase, beta subunit n=1 Tax=Cyan... 455 e-126 UniRef50_B8HVQ4 NADH dehydrogenase (Quinone) n=11 Tax=Bacteria R... 455 e-126 UniRef50_D1C356 NADH dehydrogenase (Quinone) n=1 Tax=Sphaerobact... 452 e-125 UniRef50_B4SQT1 NADH-quinone oxidoreductase, F subunit n=16 Tax=... 450 e-125 UniRef50_C6X0Z6 NADH-ubiquinone oxidoreductase chain F n=2 Tax=B... 449 e-125 UniRef50_B9KZ80 NAD-dependent formate dehydrogenase beta subunit... 449 e-124 UniRef50_D2R5G5 NADH dehydrogenase (Quinone) n=3 Tax=Planctomyce... 448 e-124 UniRef50_A1ALP4 NADH dehydrogenase (Quinone) n=1 Tax=Pelobacter ... 447 e-124 UniRef50_O66841 NADH-quinone oxidoreductase subunit F n=6 Tax=Aq... 446 e-124 UniRef50_A9KQG9 NADH dehydrogenase (Quinone) n=6 Tax=Clostridial... 446 e-124 UniRef50_A8GM77 NADH-quinone oxidoreductase subunit F n=17 Tax=P... 445 e-123 UniRef50_B2ULY8 NADH dehydrogenase (Quinone) n=58 Tax=Bacteria R... 444 e-123 UniRef50_P49821 NADH dehydrogenase [ubiquinone] flavoprotein 1, ... 443 e-123 UniRef50_A5GD11 NADH dehydrogenase (Quinone) n=6 Tax=Deltaproteo... 442 e-123 UniRef50_Q6MDR1 Probable NADH-ubiquinone oxidoreductase chain F ... 440 e-122 UniRef50_Q0AYU9 NADH dehydrogenase (Quinone) n=4 Tax=Bacteria Re... 440 e-122 UniRef50_Q2S5I8 Respiratory-chain NADH dehydrogenase 51 Kd subun... 438 e-121 UniRef50_D0LZ02 NADH-quinone oxidoreductase, F subunit n=1 Tax=H... 437 e-121 UniRef50_Q20Z43 NADH dehydrogenase (Quinone) n=2 Tax=Rhodopseudo... 435 e-120 UniRef50_D1N816 NADH dehydrogenase (Quinone) n=1 Tax=Victivallis... 435 e-120 UniRef50_D2BG77 [Fe] hydrogenase, HymB subunit n=6 Tax=cellular ... 435 e-120 UniRef50_B2V6E9 NADH dehydrogenase (Quinone) n=18 Tax=Bacteria R... 434 e-120 UniRef50_A1VM65 NADH-quinone oxidoreductase, F subunit n=162 Tax... 433 e-120 UniRef50_C9RJK0 NADH dehydrogenase (Quinone) n=1 Tax=Fibrobacter... 432 e-119 UniRef50_B6JB78 NADH dehydrogenase i chain f n=1 Tax=Oligotropha... 431 e-119 UniRef50_C6SUV8 MIP04331p (Fragment) n=3 Tax=Drosophila melanoga... 426 e-118 UniRef50_C1YSE4 NADH:ubiquinone oxidoreductase, NADH-binding (51... 426 e-117 UniRef50_C7M2U2 NADH dehydrogenase (Quinone) n=1 Tax=Acidimicrob... 420 e-116 UniRef50_A3EW61 NADH dehydrogenase (Quinone) n=3 Tax=Bacteria Re... 419 e-115 UniRef50_C1AB34 NADH-quinone oxidoreductase chain F n=1 Tax=Gemm... 418 e-115 UniRef50_A9EX79 NADH dehydrogenase (Ubiquinone) n=1 Tax=Sorangiu... 418 e-115 UniRef50_C4XMN9 NADH-quinone oxidoreductase chain F n=5 Tax=Delt... 417 e-115 UniRef50_Q9ZBV8 Putative respiratory chain oxidoreductase n=4 Ta... 410 e-113 UniRef50_B5ICD1 Respiratory-chain NADH dehydrogenase 51 Kd subun... 409 e-112 UniRef50_Q2LQE7 NADH-quinone oxidoreductase chain F n=1 Tax=Synt... 408 e-112 UniRef50_B8D1I1 NADH dehydrogenase I subunit F n=2 Tax=Bacteria ... 407 e-112 UniRef50_C8QXK3 NADH dehydrogenase (Quinone) n=1 Tax=Desulfurivi... 405 e-111 UniRef50_C4LEV2 Respiratory-chain NADH dehydrogenase domain 51 k... 401 e-110 UniRef50_Q1QYV5 NADH dehydrogenase (Quinone) n=66 Tax=Proteobact... 399 e-110 UniRef50_C9KNE8 Protein HymB n=2 Tax=Veillonellaceae RepID=C9KNE... 397 e-109 UniRef50_Q2SQP5 NADH:ubiquinone oxidoreductase, NADH-binding (51... 397 e-109 UniRef50_C0X553 NADH dehydrogenase (Quinone) n=24 Tax=Firmicutes... 385 e-105 UniRef50_A9BV38 Respiratory-chain NADH dehydrogenase domain 51 k... 383 e-105 UniRef50_A1WBG0 NADH dehydrogenase (Quinone) n=11 Tax=Proteobact... 383 e-105 UniRef50_Q47HE6 NADH dehydrogenase (Ubiquinone), 24 kDa subunit:... 382 e-104 UniRef50_B6K7D1 NADH-quinone oxidoreductase subunit F n=1 Tax=Sc... 381 e-104 UniRef50_B4Q4H9 GD22602 n=4 Tax=Coelomata RepID=B4Q4H9_DROSI 380 e-104 UniRef50_B8ERX4 Respiratory-chain NADH dehydrogenase domain 51 k... 378 e-103 UniRef50_A8ERL2 NADH-quinone oxidoreductase, F subunit n=2 Tax=C... 378 e-103 UniRef50_B1Y7Y8 Respiratory-chain NADH dehydrogenase domain 51 k... 376 e-102 UniRef50_A1SU84 Hydrogenase, NADP-reducing subunit C n=1 Tax=Psy... 375 e-102 UniRef50_C6I0C0 NADH dehydrogenase (Quinone) n=1 Tax=Leptospiril... 369 e-100 UniRef50_A6GJI0 Putative NADH dehydrogenase I chain F n=1 Tax=Pl... 367 e-100 UniRef50_Q1V283 NAD-dependent formate dehydrogenase beta subunit... 366 e-99 UniRef50_A1Z9Z7 CG8102, isoform A n=7 Tax=melanogaster subgroup ... 363 5e-99 UniRef50_D0IAF4 NAD-reducing hydrogenase hoxS subunit alpha n=1 ... 363 9e-99 UniRef50_B9MEW2 Respiratory-chain NADH dehydrogenase domain 51 k... 362 2e-98 UniRef50_A7IMB3 NADH dehydrogenase (Quinone) n=15 Tax=Proteobact... 362 2e-98 UniRef50_D2PS76 Respiratory-chain NADH dehydrogenase domain 51 k... 362 2e-98 UniRef50_P22317 NAD-reducing hydrogenase hoxS subunit alpha n=5 ... 360 8e-98 UniRef50_UPI0000384AE3 COG1894: NADH:ubiquinone oxidoreductase, ... 357 5e-97 UniRef50_B1CAU2 Putative uncharacterized protein n=1 Tax=Anaerof... 355 2e-96 UniRef50_D1C1S2 NADH dehydrogenase (Quinone) n=1 Tax=Sphaerobact... 353 9e-96 UniRef50_A2DV30 Respiratory-chain NADH dehydrogenase 51 Kd subun... 352 1e-95 UniRef50_O94500 NADH-ubiquinone oxidoreductase 51 kDa subunit, m... 339 1e-91 UniRef50_B2UIT6 NADH dehydrogenase (Quinone) n=6 Tax=Betaproteob... 335 2e-90 UniRef50_Q293C9 GA20825 n=4 Tax=Drosophila RepID=Q293C9_DROPS 331 4e-89 UniRef50_A0K164 NADH dehydrogenase (Quinone) n=2 Tax=Actinomycet... 326 1e-87 UniRef50_Q1PZQ6 Similar to NADH dehydrogenase I chain F (1st mod... 321 2e-86 UniRef50_A1TZ63 Electron transport complex, RnfABCDGE type, C su... 308 2e-82 UniRef50_Q1ZEG2 Electron transport complex protein RnfC n=1 Tax=... 308 3e-82 UniRef50_Q15RL3 Electron transport complex, RnfABCDGE type, C su... 303 1e-80 UniRef50_Q1N6T4 Electron transport complex protein RnfC n=1 Tax=... 302 1e-80 UniRef50_UPI00016C4299 NADH dehydrogenase (quinone) n=1 Tax=Gemm... 301 4e-80 UniRef50_B0K144 Electron transport complex, RnfABCDGE type, C su... 300 7e-80 UniRef50_Q65U33 Electron transport complex protein rnfC n=29 Tax... 299 1e-79 UniRef50_B5JW06 EleCtron transport complex, rnfabcdge type, c su... 299 1e-79 UniRef50_B6BWH5 Electron transport complex protein RnfC n=2 Tax=... 296 8e-79 UniRef50_Q2SKU6 Predicted NADH:ubiquinone oxidoreductase, subuni... 294 4e-78 UniRef50_Q603B2 Electron transport complex, C subunit n=1 Tax=Me... 293 1e-77 UniRef50_B4RTX9 Electron transport complex protein RnfC n=2 Tax=... 289 1e-76 UniRef50_C7RDT7 Electron transport complex, RnfABCDGE type, C su... 289 2e-76 UniRef50_Q51696 Putative uncharacterized protein ORF2 n=1 Tax=Br... 288 4e-76 UniRef50_C6L993 Na(+)-translocating NADH-quinone reductase, A su... 286 8e-76 UniRef50_Q21I18 Serine/threonine protein kinase n=1 Tax=Saccharo... 286 9e-76 UniRef50_A8AH10 Electron transport complex protein rnfC n=6 Tax=... 286 2e-75 UniRef50_C9XNL2 Electron transport complex protein n=7 Tax=Clost... 285 2e-75 UniRef50_Q0VP39 Electron transport complex protein rnfC n=12 Tax... 285 2e-75 UniRef50_A5HYR2 Electron transport complex protein n=37 Tax=Bact... 285 2e-75 UniRef50_D0L1N5 Electron transport complex, RnfABCDGE type, C su... 284 5e-75 UniRef50_Q31GU4 NADH oxidoreductase, RnfABCDGE type, C subunit n... 283 9e-75 UniRef50_B2HFH1 NADH dehydrogenase I (Chain F) (NADH-ubiquinone ... 283 1e-74 UniRef50_B4K2N7 GH25296 n=4 Tax=Coelomata RepID=B4K2N7_DROGR 281 5e-74 UniRef50_A5N7M5 RnfC n=6 Tax=Clostridiales RepID=A5N7M5_CLOK5 280 6e-74 UniRef50_C3JHP2 Respiratory-chain NADH dehydrogenase domain, 51 ... 280 7e-74 UniRef50_C1IC09 Respiratory-chain NADH dehydrogenase n=2 Tax=Str... 279 1e-73 UniRef50_A5ZMX0 Putative uncharacterized protein n=2 Tax=Clostri... 279 1e-73 UniRef50_Q47GW4 Electron transport complex, RnfABCDGE type, C su... 279 2e-73 UniRef50_A7BY78 Electron transport complex protein rnfC n=4 Tax=... 278 3e-73 UniRef50_Q8RIJ6 Nitrogen fixation iron-sulphur protein RNFC n=17... 278 3e-73 UniRef50_D1N841 Electron transport complex, RnfABCDGE type, C su... 278 3e-73 UniRef50_A1WTR7 Electron transport complex, RnfABCDGE type, C su... 278 4e-73 UniRef50_A8SLB1 Putative uncharacterized protein n=1 Tax=Parvimo... 277 7e-73 UniRef50_C7HT97 Na(+)-translocating NADH-quinone reductase, A su... 276 1e-72 UniRef50_C6WYE0 Electron transport complex, RnfABCDGE type, C su... 274 5e-72 UniRef50_D1B8H6 Electron transport complex, RnfABCDGE type, C su... 273 9e-72 UniRef50_Q52716 Electron transport complex protein rnfC n=9 Tax=... 273 9e-72 UniRef50_A3WQG7 Electron transport complex protein RnfC n=1 Tax=... 272 2e-71 UniRef50_Q67JR5 NADH dehydrogenase subunit n=1 Tax=Symbiobacteri... 271 4e-71 UniRef50_A1WT48 Electron transport complex, RnfABCDGE type, C su... 271 4e-71 UniRef50_B2A142 Electron transport complex, RnfABCDGE type, C su... 269 2e-70 UniRef50_B0VFP0 Electron transport complex protein rnfC, NAD and... 268 2e-70 UniRef50_D2RN96 Electron transport complex, RnfABCDGE type, C su... 268 2e-70 UniRef50_A9L0J9 Electron transport complex, RnfABCDGE type, C su... 267 6e-70 UniRef50_A1SSX3 Electron transport complex, RnfABCDGE type, C su... 266 1e-69 UniRef50_Q0TQI8 Electron transport complex, RnfABCDGE type, C su... 265 2e-69 UniRef50_B0S407 Electron transport complex protein n=2 Tax=Fineg... 265 3e-69 UniRef50_C5BT99 Electron transport complex, RnfABCDGE type, C su... 265 3e-69 UniRef50_D1PFH3 Electron transport complex, RnfABCDGE type, C su... 265 3e-69 UniRef50_A3DI53 Electron transport complex, RnfABCDGE type, C su... 264 4e-69 UniRef50_C5BNI0 Electron transport complex, RnfABCDGE type, C su... 263 9e-69 UniRef50_Q5P537 Electron transport complex protein rnfC (Nitroge... 263 1e-68 UniRef50_A7FHZ3 Electron transport complex protein rnfC n=42 Tax... 263 1e-68 UniRef50_Q3A7W8 Predicted NADH:ubiquinone oxidoreductase, subuni... 263 1e-68 UniRef50_C5BDE7 Electron transport complex protein rnfC n=215 Ta... 262 2e-68 UniRef50_A0L5G6 Electron transport complex, RnfABCDGE type, C su... 262 2e-68 UniRef50_C4FA62 Putative uncharacterized protein n=2 Tax=Collins... 261 4e-68 UniRef50_Q1Q5X5 Conserved hypothetical iron sulfur protein n=1 T... 261 4e-68 UniRef50_A5X3H0 HtxX n=1 Tax=Xanthobacter flavus RepID=A5X3H0_XANFL 260 6e-68 UniRef50_C9A8J9 Respiratory-chain NADH dehydrogenase 51 kDa subu... 260 1e-67 UniRef50_Q5LC48 Electron transport complex protein n=41 Tax=Bact... 259 1e-67 UniRef50_C8WE25 Electron transport complex, RnfABCDGE type, C su... 259 1e-67 UniRef50_C0QFQ4 RnfC1 n=1 Tax=Desulfobacterium autotrophicum HRM... 259 2e-67 UniRef50_B4V5Q7 Oxidoreductase n=1 Tax=Streptomyces sp. Mg1 RepI... 259 2e-67 UniRef50_C4L9H6 Electron transport complex, RnfABCDGE type, C su... 258 2e-67 UniRef50_Q0F0I1 Electron transport complex protein RnfC n=1 Tax=... 258 5e-67 UniRef50_C0R202 Electron transport complex protein n=2 Tax=Brach... 257 6e-67 UniRef50_D2RYM8 Respiratory-chain NADH dehydrogenase domain 51 k... 257 6e-67 UniRef50_C7GZP5 Na(+)-translocating NADH-quinone reductase, A su... 256 8e-67 UniRef50_Q482U5 Electron transport complex, RnfABCDGE type, C su... 256 1e-66 UniRef50_C0WAW3 Electron transport complex protein n=1 Tax=Acida... 256 1e-66 UniRef50_A9BJD0 Electron transport complex, RnfABCDGE type, C su... 256 1e-66 UniRef50_C1D6V6 Electron transport complex protein RnfC n=2 Tax=... 256 1e-66 UniRef50_A5EVI2 Electron transport complex protein, C subunit n=... 255 2e-66 UniRef50_O96948 Hydrogenase (Fragment) n=72 Tax=root RepID=O9694... 255 2e-66 UniRef50_Q0AAG9 Electron transport complex, RnfABCDGE type, C su... 255 2e-66 UniRef50_A6VVJ2 Electron transport complex, RnfABCDGE type, C su... 255 2e-66 UniRef50_C8NC21 Electron transport complex protein RnfC (Fragmen... 255 3e-66 UniRef50_Q2J9U3 Respiratory-chain NADH dehydrogenase domain, 51 ... 254 4e-66 UniRef50_A8FUX8 Electron transport complex, RnfABCDGE type, C su... 253 1e-65 UniRef50_B5JR42 Electron transport complex, RnfABCDGE type, C su... 251 3e-65 UniRef50_B3PB34 Electron transport complex protein RnfC n=1 Tax=... 251 5e-65 UniRef50_A6FIW1 Electron transport complex protein RnfC n=2 Tax=... 249 1e-64 UniRef50_A8ZSV2 Electron transport complex, RnfABCDGE type, C su... 249 1e-64 UniRef50_D1PN92 Na(+)-translocating NADH-quinone reductase, A su... 249 2e-64 UniRef50_Q67R12 Na+-transporting NADH-quinone reductase subunit ... 249 2e-64 UniRef50_B8CM56 Electron transport complex, RnfABCDGE type, C su... 249 2e-64 UniRef50_A4SEA3 Electron transport complex, RnfABCDGE type, C su... 249 2e-64 UniRef50_D1A5I5 NADH dehydrogenase (Quinone) n=2 Tax=Actinomycet... 248 2e-64 UniRef50_C9N0M8 Electron transport complex, RnfABCDGE type, C su... 248 3e-64 UniRef50_C1SKX2 Electron transport complex, RnfABCDGE type, C su... 246 9e-64 UniRef50_D1Y5V9 Electron transport complex protein RnfC n=1 Tax=... 246 1e-63 UniRef50_C9LBM9 Na(+)-translocating NADH-quinone reductase, A su... 246 1e-63 UniRef50_C9M8J9 Electron transport complex, RnfABCDGE type, C su... 246 2e-63 UniRef50_B2A1V2 Electron transport complex, RnfABCDGE type, C su... 244 4e-63 UniRef50_C8WMP9 Electron transport complex, RnfABCDGE type, C su... 243 8e-63 UniRef50_Q18DS5 NAD-reducing hydrogenase, alpha subunit n=1 Tax=... 241 5e-62 UniRef50_B0PD32 Putative uncharacterized protein n=3 Tax=Clostri... 239 2e-61 UniRef50_A1AVH8 Electron transport complex, RnfABCDGE type, C su... 239 2e-61 UniRef50_C4Z9G3 RnfC/nqrF n=16 Tax=Bacteria RepID=C4Z9G3_EUBR3 238 3e-61 UniRef50_A0LLS5 Electron transport complex, RnfABCDGE type, C su... 237 4e-61 UniRef50_C7NCF5 Electron transport complex, RnfABCDGE type, C su... 237 6e-61 UniRef50_D1KBG6 Electron transport complex protein RnfC n=1 Tax=... 237 6e-61 UniRef50_B5HXD6 Oxidoreductase n=2 Tax=Streptomyces RepID=B5HXD6... 237 8e-61 UniRef50_C4RMV1 Oxidoreductase (Fragment) n=6 Tax=Actinomycetale... 236 2e-60 UniRef50_C1V5Z7 NADH dehydrogenase subunit F n=1 Tax=Halogeometr... 235 2e-60 UniRef50_D1VUL2 Electron transport complex protein RnfC n=1 Tax=... 235 3e-60 UniRef50_C7Q9V1 Respiratory-chain NADH dehydrogenase domain 51 k... 233 1e-59 UniRef50_Q9HYB8 Electron transport complex protein rnfC n=12 Tax... 232 2e-59 UniRef50_B0MQ91 Putative uncharacterized protein n=1 Tax=Eubacte... 229 2e-58 UniRef50_C5SAZ1 Electron transport complex, RnfABCDGE type, C su... 228 3e-58 UniRef50_Q73PG1 Na(+)-translocating NADH-quinone reductase, A su... 228 3e-58 UniRef50_A9NEB0 NADH oxidoreductase complex RnfABCDGE type, C su... 226 1e-57 UniRef50_A1SNE6 Respiratory-chain NADH dehydrogenase domain, 51 ... 226 2e-57 UniRef50_UPI0001B56646 respiratory-chain NADH dehydrogenase doma... 225 2e-57 UniRef50_D2MNP9 Electron transport complex, RnfABCDGE type, C su... 225 3e-57 UniRef50_A6NT39 Putative uncharacterized protein n=1 Tax=Bactero... 225 3e-57 UniRef50_Q5V638 Putative NADH dehydrogenase I, F subunit n=1 Tax... 218 4e-55 UniRef50_C7LYX8 Respiratory-chain NADH dehydrogenase domain 51 k... 217 5e-55 UniRef50_B1CC51 Putative uncharacterized protein n=1 Tax=Anaerof... 216 2e-54 UniRef50_C7H9I3 Electron transport complex, RnfABCDGE type, C su... 214 4e-54 UniRef50_A1SQ39 Respiratory-chain NADH dehydrogenase domain, 51 ... 214 7e-54 UniRef50_Q6AIR8 Related to propanediol utilization protein (PduS... 212 2e-53 UniRef50_D2S0T7 Respiratory-chain NADH dehydrogenase domain 51 k... 212 2e-53 UniRef50_C8XFQ0 Respiratory-chain NADH dehydrogenase domain 51 k... 211 3e-53 UniRef50_B7CAH2 Putative uncharacterized protein n=1 Tax=Eubacte... 211 5e-53 UniRef50_D2S0Q1 NADH ubiquinone oxidoreductase, F subunit, iron ... 211 6e-53 UniRef50_C2MC01 Electron transport complex protein RnfC n=1 Tax=... 210 8e-53 UniRef50_Q89AW8 Electron transport complex protein rnfC n=1 Tax=... 209 2e-52 UniRef50_A6LZW7 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 209 2e-52 UniRef50_C6PYB3 Respiratory-chain NADH dehydrogenase domain 51 k... 207 5e-52 UniRef50_Q0PIB6 Ethanolamine utilization Fe-S center protein eut... 207 5e-52 UniRef50_A9KN64 Respiratory-chain NADH dehydrogenase domain 51 k... 205 3e-51 UniRef50_A5N6H2 RnfC related NADH dehydrogenase n=2 Tax=Clostrid... 202 2e-50 UniRef50_C6LEW4 PduS protein n=3 Tax=Bacteria RepID=C6LEW4_9FIRM 202 2e-50 UniRef50_P57215 Electron transport complex protein rnfC n=3 Tax=... 200 1e-49 UniRef50_A6TUS7 Respiratory-chain NADH dehydrogenase domain, 51 ... 198 3e-49 UniRef50_C3X8F4 RnfC protein n=1 Tax=Oxalobacter formigenes OXCC... 198 4e-49 UniRef50_D1B7S1 Respiratory-chain NADH dehydrogenase domain 51 k... 198 4e-49 UniRef50_C0R1F3 DH dehydrogenase n=3 Tax=Brachyspira RepID=C0R1F... 197 5e-49 UniRef50_D1AJ84 Respiratory-chain NADH dehydrogenase domain 51 k... 197 9e-49 UniRef50_C4LFE2 Respiratory-chain NADH dehydrogenase domain 51 k... 196 1e-48 UniRef50_A0AHN6 Complete genome n=18 Tax=Listeria RepID=A0AHN6_L... 195 2e-48 Sequences not found previously or not previously below threshold: >UniRef50_P31979 NADH-quinone oxidoreductase subunit F n=44 Tax=Enterobacteriaceae RepID=NUOF_ECOLI Length = 445 Score = 553 bits (1424), Expect = e-156, Method: Composition-based stats. Identities = 445/445 (100%), Positives = 445/445 (100%) Query: 1 MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLK 60 MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLK Sbjct: 1 MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLK 60 Query: 61 GRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISA 120 GRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISA Sbjct: 61 GRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISA 120 Query: 121 FALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYIC 180 FALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYIC Sbjct: 121 FALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYIC 180 Query: 181 GEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNIS 240 GEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNIS Sbjct: 181 GEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNIS 240 Query: 241 KSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFL 300 KSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFL Sbjct: 241 KSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFL 300 Query: 301 TEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDG 360 TEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDG Sbjct: 301 TEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDG 360 Query: 361 LPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFE 420 LPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFE Sbjct: 361 LPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFE 420 Query: 421 AGIKQPFSNTHLINGIQPNLLKERW 445 AGIKQPFSNTHLINGIQPNLLKERW Sbjct: 421 AGIKQPFSNTHLINGIQPNLLKERW 445 >UniRef50_C8W2X2 NADH dehydrogenase (Quinone) n=24 Tax=Bacteria RepID=C8W2X2_DESAS Length = 597 Score = 527 bits (1357), Expect = e-148, Method: Composition-based stats. Identities = 175/435 (40%), Positives = 257/435 (59%), Gaps = 3/435 (0%) Query: 9 ETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFS 68 +T R P ++EY +++GY+ K L+ SP+E+++ +K +GL+GRGGAGF Sbjct: 114 RQTRVTLRNTGLINPESIEEYIARDGYQALGKVLSKYSPEEVISAIKASGLRGRGGAGFP 173 Query: 69 TGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRG 128 TGLKW + +Y++CNADE +PG + DR ++E PH ++E M I +A+ A +G Sbjct: 174 TGLKWEFTARASGNP-KYVVCNADEGDPGAFMDRSILEGDPHSVLEAMAICGYAIGAEKG 232 Query: 129 YIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALIN 188 +I++R EY A L AI + E GLLG+NI TGF+F++ + GAG ++CGEETAL+ Sbjct: 233 FIYVRAEYPLAVQRLETAIGKCLEYGLLGRNIFSTGFNFDIEIRVGAGAFVCGEETALLA 292 Query: 189 SLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTK 248 S+EGRR PR KPPFPA G WGKPT +NNVET N+P I+ NG EW+ I GTK Sbjct: 293 SIEGRRGEPRPKPPFPAQEGLWGKPTVINNVETWANIPPIILNGPEWFSAIGTENSKGTK 352 Query: 249 LMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLP 308 + +G++ N GL E+P GT +EI+ D GG+ +G KFKA Q GG + +LD P Sbjct: 353 VFALAGKINNTGLVEVPMGTPLKEIIYDIGGGIPNGKKFKAVQTGGPSGGCIPAEYLDTP 412 Query: 309 MEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKIL 368 ++++S+ K G+ +G+ + VD + MV L + EF ESCG C PCR G ++I+ Sbjct: 413 VDYDSLVKLGTIMGSGGMIIVDEDTCMVDLAKFFLEFVQEESCGKCAPCRIGTKRMLEIM 472 Query: 369 RALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFS 428 + G G+ GDIE LE+L + + C A P+ S +++FREE+ A IK Sbjct: 473 ERIVEGNGKDGDIELLEELSQGIK-SSALCGLGQTAPNPVLSTLRHFREEYIAHIKDKRC 531 Query: 429 NTHLINGI-QPNLLK 442 + + Sbjct: 532 PAGACQALVTYYIDA 546 >UniRef50_B0TIC6 NADH dehydrogenase conserved domain protein, nuoe and nuof n=170 Tax=cellular organisms RepID=B0TIC6_HELMI Length = 906 Score = 523 bits (1347), Expect = e-147, Method: Composition-based stats. Identities = 178/442 (40%), Positives = 267/442 (60%), Gaps = 7/442 (1%) Query: 7 TPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAG 66 P+ H + R P +D+Y + GY G KALT ++P ++V++V +GL+GRGGAG Sbjct: 416 HPQ-HRVALRNCGVINPEDIDDYLASGGYGGLAKALTAMTPAQVVDEVTKSGLRGRGGAG 474 Query: 67 FSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAY 126 F TG KW+ +Y++CNADE +PG + DR ++E PH ++E M I+ +A+ A Sbjct: 475 FLTGRKWAFTAAAPDTP-KYVVCNADEGDPGAFMDRSILEGDPHAVLEAMAIAGYAIGAR 533 Query: 127 RGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETAL 186 +GYI++R EY A L AIA+A +AGLLG++I+GTGF F++ + GAG ++CGEETAL Sbjct: 534 QGYIYVRAEYPVAVHRLEVAIAQARQAGLLGEDILGTGFSFDIDLRLGAGAFVCGEETAL 593 Query: 187 INSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAG 246 ++S+ G+R PR++PP+PA SG WGKPT +NNVET N+P I+ NG WY + + G Sbjct: 594 LHSVSGKRGEPRARPPYPALSGLWGKPTLLNNVETYANIPQIIVNGAAWYAAMGTERSKG 653 Query: 247 TKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLD 306 TK+ +G++ N GL E+P GTT R I+ D GG+ G FKA Q GG L +LD Sbjct: 654 TKIFSLAGKINNTGLIEVPMGTTLRTIIYDIGGGIPGGKAFKAVQTGGPSGGCLPAEYLD 713 Query: 307 LPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVK 366 P++++S+ GS +G+ + +D MV + R EF ESCG CTPCR G ++ Sbjct: 714 TPIDYDSLIAVGSMMGSGGLIVMDESDCMVDIARFYLEFTQDESCGKCTPCRIGTRRLLE 773 Query: 367 ILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQP 426 I+ + G+G+P D+E LE+L R + + C A + S ++YFR E+EA I Sbjct: 774 IITGITEGKGEPKDLERLEELGRDIR-EASLCGLGQTAPNLVLSTLRYFRHEYEAHINHK 832 Query: 427 FSNTHLINGIQPN----LLKER 444 + ++P + +E+ Sbjct: 833 RCPAGVCAALRPKGKFRIDEEK 854 >UniRef50_A7HLR0 NADH dehydrogenase (Quinone) n=58 Tax=Bacteria RepID=A7HLR0_FERNB Length = 610 Score = 520 bits (1340), Expect = e-146, Method: Composition-based stats. Identities = 175/438 (39%), Positives = 263/438 (60%), Gaps = 3/438 (0%) Query: 8 PETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGF 67 + R P+ ++EY +++GY KALT ++P++++ ++KD+GL+GRGGAGF Sbjct: 116 ARQVKIALRNVGVVDPMSIEEYIARDGYFALHKALTTMTPEDVIKEIKDSGLRGRGGAGF 175 Query: 68 STGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYR 127 TGLKW L + +S I+Y++CNADE +PG + DR ++E PH +VE M I+ +A+ A + Sbjct: 176 PTGLKWELARQQKSD-IKYMICNADEGDPGAFMDRSVLEGDPHSIVEAMTIAGYAIGAQK 234 Query: 128 GYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALI 187 G++++R EY A L RAI A E G LG+NI+GT F F++ + GAG ++CGEETAL+ Sbjct: 235 GFVYVRAEYPLAIERLGRAIETAHEYGFLGENILGTNFSFDIEIRIGAGAFVCGEETALM 294 Query: 188 NSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGT 247 +S+EG+R PR KPPFP G WGKP+ +NNVETL VP I+ G W++ K GT Sbjct: 295 HSIEGKRGQPRVKPPFPVQKGLWGKPSVINNVETLSLVPPIILKGASWFRQYGTEKSPGT 354 Query: 248 KLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDL 307 K+ +G++KN GL E+P G T RE+L + GG G + KA Q GG + D Sbjct: 355 KVFALAGKIKNTGLVEVPMGITLRELLYEIGGGHPQGKQIKAVQTGGPSGGVIPSEFFDT 414 Query: 308 PMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKI 367 P+++ES+GK G+ +G+ + +D + MV + + EF ESCG CTPCR+G + Sbjct: 415 PVDYESLGKLGAIMGSGGMIVLDEDDCMVDVAKFFLEFTVDESCGKCTPCREGTKVMYDL 474 Query: 368 LRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPF 427 L + +GEG DIE LE+L + + + C A P+ S ++Y+R E+EA +K Sbjct: 475 LDKITKGEGTMEDIEKLERLAQVIKD-SSLCGLGQTAPNPVLSTLRYYRHEYEAHVKDNI 533 Query: 428 SNTHLING-IQPNLLKER 444 I + E+ Sbjct: 534 CPAKKCKAFISYVISPEK 551 >UniRef50_B1L9S5 NADH dehydrogenase (Quinone) n=14 Tax=Bacteria RepID=B1L9S5_THESQ Length = 545 Score = 516 bits (1330), Expect = e-145, Method: Composition-based stats. Identities = 182/433 (42%), Positives = 259/433 (59%), Gaps = 3/433 (0%) Query: 2 KNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKG 61 + + E + + + P ++EY +++GY KAL + P E++ ++K +GL+G Sbjct: 101 VEVEKVAEETRIVLKNVGEIDPTRIEEYIARDGYFALAKAL-QMEPGEVIEEIKRSGLRG 159 Query: 62 RGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAF 121 RGGAGF TGLKW K + +Y+LCNADE EPGT+KDRL+ME PH L+EGM+I+ + Sbjct: 160 RGGAGFPTGLKWEFTYKASADQ-KYVLCNADEGEPGTFKDRLIMEGDPHSLIEGMIIAGY 218 Query: 122 ALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICG 181 A+ A +GYI++RGEY + L++A+ A E G LG+NI+G+GF+F+L + GAG Y+ G Sbjct: 219 AVGATKGYIYIRGEYHSSIEILKKAVERAYEYGFLGENILGSGFNFDLKIRLGAGAYVAG 278 Query: 182 EETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISK 241 EETALI S+EG+ A PR KPP+P T G +GKPT VNNVET NVP I+ NG EW++ Sbjct: 279 EETALIESIEGKPARPRLKPPYPPTFGLFGKPTVVNNVETFVNVPRIIMNGAEWFKKFGT 338 Query: 242 SKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLT 301 GTK+ G V G+ E+P G T R+++ + GG+ G K K Q GG+ F+ Sbjct: 339 ESSPGTKVFSLVGNVVRKGIVEVPMGVTVRDLIFKFGGGIEGGRKLKVVQTGGSAGTFIG 398 Query: 302 EAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGL 361 LD+P++F+S K G LG+ + + D +V L + FF ESCG CTPCR+G Sbjct: 399 PDKLDVPLDFDSYAKYGVSLGSGVILVADETHCVVDLALTVMRFFEHESCGKCTPCREGT 458 Query: 362 PWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEA 421 V IL + RGEG+ D++TL ++ R G +FC PL S + F EEF A Sbjct: 459 RMIVNILERISRGEGKKEDLDTLREIARNAG-ETSFCGLGQSIPVPLLSIVDNFEEEFRA 517 Query: 422 GIKQPFSNTHLIN 434 I + Sbjct: 518 HIGADKCPVGVCE 530 >UniRef50_C6A4M4 NADH:ubiquinone oxidoreductase, NADH-binding subunit F n=33 Tax=cellular organisms RepID=C6A4M4_THESM Length = 602 Score = 507 bits (1305), Expect = e-142, Method: Composition-based stats. Identities = 169/433 (39%), Positives = 258/433 (59%), Gaps = 5/433 (1%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 + P ++EY + GYE +KA + P+EI++ + +GL+GRGGAGF TGLK Sbjct: 118 IVLENSGYIDPENIEEYIAAGGYEALKKAFK-MKPEEIIDFITKSGLRGRGGAGFPTGLK 176 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 W +Y++CNADE +PG + DR ++E PH ++EGM+I A+A+ A +G+I++ Sbjct: 177 WKFTRDAPGD-EKYIVCNADEGDPGAFMDRNVLEGDPHRVIEGMIIGAYAIGATKGFIYV 235 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 R EY A LR A+ +A E G LG+NI+G+GF FE+ + GAG ++CGEETALI S+EG Sbjct: 236 RAEYPLAIKRLRIALKQAREKGFLGENILGSGFSFEIVIKEGAGAFVCGEETALIASIEG 295 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGF 252 +R PR +PP+PA G WG+PT +NNVET NVP I+ +G E Y + K GTK+ Sbjct: 296 KRGMPRPRPPYPAQKGLWGRPTNINNVETWANVPWIIKHGWEAYAALGTEKSKGTKVFAL 355 Query: 253 SGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFE 312 SG++K+ G E+P G T REIL + GG + G K KA Q GG + + + P+++E Sbjct: 356 SGKIKHGGNVEVPMGITLREILYEIGGGTKTGKKIKAVQLGGPSGGCIPDYLFNTPVDYE 415 Query: 313 SIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALE 372 S+ G+ +G+ + +D + MV + + +F +ESCG CT CR G ++L + Sbjct: 416 SVTATGAIMGSGGMVVMDEDTCMVDVAKFFLDFTVKESCGKCTFCRLGTKRMWELLDKIT 475 Query: 373 RGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHL 432 +GEG DIE LE+L + G + C A P+ + +KYF++E+ A I + + Sbjct: 476 KGEGALEDIEKLEKLAPLVKTG-SLCGLGQTAPNPVLTTLKYFKDEYLAHI-EGRCPAKV 533 Query: 433 IN-GIQPNLLKER 444 I+ ++ E+ Sbjct: 534 CKPLIKYVIITEK 546 >UniRef50_A8MJ02 NADH dehydrogenase (Quinone) n=4 Tax=Bacteria RepID=A8MJ02_ALKOO Length = 631 Score = 499 bits (1285), Expect = e-140, Method: Composition-based stats. Identities = 175/433 (40%), Positives = 261/433 (60%), Gaps = 2/433 (0%) Query: 12 PLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGL 71 R P ++EY + +GY+ K LT ++P+++V ++K +GL+GRGG GF TG+ Sbjct: 152 RTALRNCGLINPEDINEYIAFDGYKALAKTLTTMTPEDVVAEIKASGLRGRGGGGFPTGM 211 Query: 72 KWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIF 131 KW K E +Y++CNADE +PG + DR ++E P+ L+E M+IS +A+ A GY++ Sbjct: 212 KWDFTAKAEG-KEKYVVCNADEGDPGAFMDRSILEGDPNALIEAMIISGYAVGAQWGYVY 270 Query: 132 LRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLE 191 +R EY A L AI +A E GLLG NI+GT F F++ + GAG ++CGEETAL+NS+E Sbjct: 271 VRAEYPIAVGRLDLAIKQAREKGLLGSNILGTDFSFDMEIRLGAGAFVCGEETALLNSIE 330 Query: 192 GRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMG 251 G+R PR +PPFPA G WGKPT +NNVET N+P I+ +G E + K GTK+ Sbjct: 331 GKRGMPRPRPPFPAVKGLWGKPTLINNVETFANIPQIILHGAEEFIKTGTEKSKGTKVFA 390 Query: 252 FSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEF 311 G++ + GL E+P GTT REI+ + GG+ +G FKA Q GG ++ HLD P+++ Sbjct: 391 LGGKINHTGLVEIPMGTTLREIVYEIGGGIPNGKAFKAVQTGGPSGGCISVEHLDTPIDY 450 Query: 312 ESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRAL 371 +++ GS +G+ + +D + MV + R +F ESCG CTPCR+G ++IL + Sbjct: 451 DNLIALGSMMGSGGMIVMDEDNCMVDIARFFLDFTVDESCGKCTPCREGTKRMLEILERI 510 Query: 372 ERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTH 431 G+G+ GDIE LE L + + + C A P+ S +KYFR E+EA I+ Sbjct: 511 TEGKGKEGDIERLESLAQSIKI-SSLCGLGQTAPNPILSTLKYFRHEYEAHIQDKKCPAG 569 Query: 432 LINGIQPNLLKER 444 L + + E+ Sbjct: 570 LCKALLEFYITEK 582 >UniRef50_Q9I0J7 NADH-quinone oxidoreductase subunit F n=193 Tax=Bacteria RepID=NUOF_PSEAE Length = 448 Score = 497 bits (1280), Expect = e-139, Method: Composition-based stats. Identities = 336/429 (78%), Positives = 372/429 (86%), Gaps = 2/429 (0%) Query: 4 IIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRG 63 + R+ ETHPLTWRLR+D QPVWL+EY+SK+GY ARKALT ++ D+IV VKD+GLKGRG Sbjct: 12 MARSAETHPLTWRLREDAQPVWLEEYQSKDGYAAARKALTQMAQDDIVQTVKDSGLKGRG 71 Query: 64 GAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFAL 123 GAGF TG+KW LMPKDES+NIRYLLCNADEMEP T+KDR+LMEQLPHLLVEGMLISA AL Sbjct: 72 GAGFPTGVKWGLMPKDESLNIRYLLCNADEMEPNTWKDRMLMEQLPHLLVEGMLISARAL 131 Query: 124 KAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEE 183 KAYRGYIFLRGEY++AA NL RAI EA AGLLGKNI+G+GFDFELFVHTGAGRYICGEE Sbjct: 132 KAYRGYIFLRGEYVDAARNLNRAIDEAKAAGLLGKNILGSGFDFELFVHTGAGRYICGEE 191 Query: 184 TALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSK 243 TALINSLEGRRANPRSKPPFPA G WGKPTCVNNVETLCNVPAI+ NGV+WY+ +++ Sbjct: 192 TALINSLEGRRANPRSKPPFPAAVGVWGKPTCVNNVETLCNVPAIVGNGVDWYKTLARPG 251 Query: 244 D--AGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLT 301 GTKLMGFSG+VKNPGLWELPFG +ARE+ EDYAGGMRDG + KAWQPGGAGT FL Sbjct: 252 SEDMGTKLMGFSGKVKNPGLWELPFGVSARELFEDYAGGMRDGFQLKAWQPGGAGTGFLL 311 Query: 302 EAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGL 361 HLD M I K G+R+GT LAMAVD INMVSL+RN+EEFFARESCGWCTPCRDGL Sbjct: 312 PEHLDAQMFAGGIAKVGTRMGTGLAMAVDDSINMVSLLRNMEEFFARESCGWCTPCRDGL 371 Query: 362 PWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEA 421 PWSVK+LRALERGEGQPGD+ETLEQL FLGPGKTFCAHAPGAVEPL SA+KYFR EFEA Sbjct: 372 PWSVKLLRALERGEGQPGDLETLEQLVNFLGPGKTFCAHAPGAVEPLGSALKYFRAEFEA 431 Query: 422 GIKQPFSNT 430 GI + S Sbjct: 432 GISRQPSAA 440 >UniRef50_A3DCA0 NADH dehydrogenase (Quinone) n=10 Tax=cellular organisms RepID=A3DCA0_CLOTH Length = 597 Score = 496 bits (1277), Expect = e-139, Method: Composition-based stats. Identities = 172/438 (39%), Positives = 258/438 (58%), Gaps = 3/438 (0%) Query: 8 PETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGF 67 + + R P +DEY + +GY+ K LT ++P+++V+ +K +GL+GRGG GF Sbjct: 112 AKQQRIALRNCGVINPENIDEYIAFDGYKALAKVLTEMTPEQVVDVIKRSGLRGRGGGGF 171 Query: 68 STGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYR 127 TGLKW K ++ +Y+ CNADE +PG + DR ++E PH ++E M I+ +A+ A + Sbjct: 172 PTGLKWEFAMKQDADQ-KYVCCNADEGDPGAFMDRSVLEGDPHSVIEAMAIAGYAIGANQ 230 Query: 128 GYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALI 187 GY+++R EY A L AI +A E GLLGKNI GT F F++ + GAG ++CGEETAL+ Sbjct: 231 GYVYVRAEYPIAVKRLGIAIQQAREYGLLGKNIFGTDFSFDVDIRLGAGAFVCGEETALM 290 Query: 188 NSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGT 247 S+EG R PR +PPFPA G W KPT +NNVET N+P I+ G EW+ +I K GT Sbjct: 291 TSIEGHRGEPRPRPPFPAVKGLWQKPTLLNNVETYANIPQIILKGPEWFASIGTEKSKGT 350 Query: 248 KLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDL 307 K+ G++ N GL E+P GTT RE++ D GG+ +G KFKA Q GG + +H+D Sbjct: 351 KVFAVGGKINNTGLVEIPMGTTLREVIYDIGGGIPNGKKFKAAQTGGPSGGCIPASHIDT 410 Query: 308 PMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKI 367 P++++S+ + GS +G+ + +D + MV + + EF ESCG C PCR G +I Sbjct: 411 PIDYDSLTQLGSMMGSGGLIIMDEDTCMVDIAKFFLEFTVDESCGKCPPCRIGTKRMYEI 470 Query: 368 LRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPF 427 L + G+G+ GDIE LE L + + C A P+ S ++YFR E+ ++ Sbjct: 471 LERITEGKGEEGDIEKLEMLAKNIK-ASALCGLGQTAPNPILSTLRYFRHEYIEHVRDKK 529 Query: 428 SNTHLING-IQPNLLKER 444 + + + E+ Sbjct: 530 CAAGVCKALMHYEIDAEK 547 >UniRef50_C0GLW6 NADH dehydrogenase (Quinone) n=2 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GLW6_9DELT Length = 774 Score = 492 bits (1268), Expect = e-138, Method: Composition-based stats. Identities = 169/438 (38%), Positives = 261/438 (59%), Gaps = 3/438 (0%) Query: 9 ETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFS 68 + + R P + +Y + G++ +K + +SPD+++ +VK A L+GRGGAGF Sbjct: 133 KQVKIALRNTGKVDPHDIHQYIAAGGFKAVKKMFSRMSPDDVLEEVKKANLRGRGGAGFP 192 Query: 69 TGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRG 128 G KW+ + + ++ N DE +PG + DR +ME P L+EGMLI A+++ A G Sbjct: 193 AGFKWAHTKRSGKGVPKLVIANGDEGDPGAFMDRSIMEGDPFSLLEGMLICAYSIDANFG 252 Query: 129 YIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALIN 188 +I++R EY A L +AI +A E GLLG+NI+GTGFDF +F+ GAG ++CGE T+L+ Sbjct: 253 FIYVRHEYPLAIKTLEKAIKQAEEMGLLGRNILGTGFDFSVFIKEGAGAFVCGEATSLVA 312 Query: 189 SLEGRRANPRSKPPFPATS--GAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAG 246 SLEG+R PR++PP + GAWG P+ +NN+ET VP I+ G +W+ I G Sbjct: 313 SLEGQRGFPRARPPRLSEVGGGAWGYPSNLNNIETYACVPPIIEKGADWFLGIGTPGSPG 372 Query: 247 TKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLD 306 TK+ +G+V N GL E+P G T REI+++ GG+ + KFKA Q GG + E +LD Sbjct: 373 TKVFSLAGKVNNTGLVEVPMGITLREIVDEIGGGILNNRKFKAIQTGGPSGGCIPEQYLD 432 Query: 307 LPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVK 366 LP++F+S+ + GS +G+ + +D MV + + F ESCG C PCR G ++ Sbjct: 433 LPVDFDSLWQVGSMMGSGGMVVMDESDCMVDIAKFFLAFCQSESCGKCPPCRVGTYQMLQ 492 Query: 367 ILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQP 426 I+ + GEGQPGDIE LE+L +G G + C A P+ + ++YFREE+E I Sbjct: 493 IMERITSGEGQPGDIERLEKLIETVGEG-SLCGLGRSAPNPVATTLRYFREEYEEHIHDK 551 Query: 427 FSNTHLINGIQPNLLKER 444 + ++ +G+ + ++ Sbjct: 552 YCRANVCSGMGVFTIDQK 569 >UniRef50_D1CCD0 NADH dehydrogenase (Quinone) n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCD0_THET1 Length = 580 Score = 490 bits (1261), Expect = e-137, Method: Composition-based stats. Identities = 163/425 (38%), Positives = 236/425 (55%), Gaps = 2/425 (0%) Query: 10 THPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFST 69 H + + P L++Y + G+ KAL +S DEI+ +VK + L+GRGGAGF Sbjct: 139 QHRILLANCGWQNPESLEDYLALGGFSALEKALFEMSQDEIIAEVKASNLRGRGGAGFPA 198 Query: 70 GLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGY 129 G+KW E +Y++ NA E EP +KDR L+E P+ ++EG++I+A+A+ GY Sbjct: 199 GIKWESAR-SERNRPKYVIVNAHEGEPNVFKDRRLIEGDPYAVIEGLMIAAWAVGVNDGY 257 Query: 130 IFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINS 189 I++ EY A L RAI + GLLGK+I+G+GFDF++ V GAG YI GE +A I Sbjct: 258 IYVGSEYPLAMERLNRAIRRMHQVGLLGKDILGSGFDFDIKVVPGAGAYISGEASAAIYG 317 Query: 190 LEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKL 249 ++G++ PR+KPP A +G WGKPT VNNVETL NVP I+ G +W+ +I GTK+ Sbjct: 318 IQGQKGFPRTKPPRSAEAGLWGKPTVVNNVETLANVPHIINKGAQWFASIGTENSTGTKV 377 Query: 250 MGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPM 309 +G + + L E G T R++L GGMR+G KFKA GG L E+ LDL Sbjct: 378 FSLAGDINHVSLVEADMGITMRDLLFVAGGGMRNGAKFKAVLAGGISGGALPESTLDLTN 437 Query: 310 EFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILR 369 EF ++ GS +G+ + D MV L F ESCG C PCR G + +L Sbjct: 438 EFGTLEAEGSMMGSGGYIIYDENTCMVDLAFYCTRFNRDESCGKCVPCRIGTSAQLAMLD 497 Query: 370 ALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSN 429 + +G G+ DI+ L Q + + C A P+ S +++FR+E EA I++ Sbjct: 498 RIMKGLGEEIDIDRLTQSSEDI-IAYSLCGLGQAAPIPVLSVLRHFRDEVEAHIREKRCP 556 Query: 430 THLIN 434 + Sbjct: 557 AGVCR 561 >UniRef50_Q2LYA9 NADH:ubiquinone oxidoreductase, NADH-binding subunit n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LYA9_SYNAS Length = 637 Score = 490 bits (1261), Expect = e-137, Method: Composition-based stats. Identities = 180/437 (41%), Positives = 267/437 (61%), Gaps = 3/437 (0%) Query: 9 ETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFS 68 + + R P +DEY ++ GY KALT +SP++++ +VK +GL+GRGG GF Sbjct: 154 KQVKIALRNCGMIDPENMDEYIARGGYTALHKALTTMSPEDVILEVKTSGLRGRGGGGFP 213 Query: 69 TGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRG 128 TG KW + E I+Y++CN DE +PG Y DR LME PH ++EGM+I A+A+ A+ G Sbjct: 214 TGTKWESCRRAEGE-IKYVICNGDEGDPGAYMDRSLMEGDPHSVLEGMIIGAYAIGAHEG 272 Query: 129 YIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALIN 188 YI++R EY A NL+ AI +A EAGLLGKNI+GTGF+F++ + GAG ++CGE TAL+ Sbjct: 273 YIYVRNEYPLAVANLQHAIGQAREAGLLGKNILGTGFEFDIKIAKGAGAFVCGESTALMA 332 Query: 189 SLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTK 248 SLEG+ PR+K G W +P+ +NNVET NVP I+A G +W+ I GTK Sbjct: 333 SLEGKAGEPRAKYIHTVEQGLWNRPSNLNNVETWANVPVIIARGGQWFSGIGVKHSTGTK 392 Query: 249 LMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLP 308 + G++ N GL E+P G ++I+ + GG+ G KFKA Q GG + + +DLP Sbjct: 393 VFSLVGKINNIGLVEVPMGIPLKDIIYEIGGGIPGGRKFKAVQTGGPSGGCIPDTMIDLP 452 Query: 309 MEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKIL 368 ++F+S+ +AGS +G+ + +D + MV + R EF ESCG C PCR+G+ +IL Sbjct: 453 VDFDSLWEAGSMMGSGGMIVMDDKTCMVDIARYFIEFLVSESCGKCVPCREGIYRMNEIL 512 Query: 369 RALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFS 428 + + G+G+ GD+E L ++ + G + CA A P+ S I+YFR E++A I+ Sbjct: 513 QDICAGKGRRGDLELLGRMAEAIKDG-SLCALGGSAPNPVLSTIRYFRSEYDAHIRSKKC 571 Query: 429 NTHLING-IQPNLLKER 444 + IQ N+ KE+ Sbjct: 572 PAGVCKALIQYNIDKEK 588 >UniRef50_Q1DDC8 NADH dehydrogenase I, F subunit n=5 Tax=Bacteria RepID=Q1DDC8_MYXXD Length = 446 Score = 483 bits (1244), Expect = e-135, Method: Composition-based stats. Identities = 186/441 (42%), Positives = 260/441 (58%), Gaps = 12/441 (2%) Query: 1 MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLK 60 M + +T E P+ Q LD YR + GYE +KAL + P I+++VK + L+ Sbjct: 1 MASTAKTIE--PIISAAWGKPQSWTLDSYRKRGGYEALKKAL-QMEPAAIIDEVKKSNLR 57 Query: 61 GRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISA 120 GRGGAGF TGLKWS +PK +S +YL N DE EPGT+KDR ++E PH+++EG+ I++ Sbjct: 58 GRGGAGFPTGLKWSFVPK-DSPKPKYLAVNGDESEPGTFKDRYILEDDPHMMLEGIAIAS 116 Query: 121 FALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYIC 180 +AL + Y++LRGE+ A + AI EA +AG+ GK ++G ++ ++ GAG YIC Sbjct: 117 YALGVHTCYVYLRGEFKFPAERTQAAIDEAYKAGIFGKKVLGKDYELNCYLVRGAGAYIC 176 Query: 181 GEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNIS 240 GEETAL+ SLEG++ PR KPPFPA G +G PT VNNVETL +VPAI G E Y + Sbjct: 177 GEETALLESLEGKKGWPRLKPPFPAVVGLFGCPTVVNNVETLASVPAIFQQGAEAYAKLG 236 Query: 241 KSKDAGTKLMGFSGRVKNPGLWELPFGTTAREIL--EDYAGGMRDGLKFKAWQPGGAGTD 298 K GT+L+ SG V PG++E+ TT E++ + Y GM G K KA PGG+ Sbjct: 237 TDKSGGTRLVCLSGTVNRPGVYEVSMFTTLSELIFDDKYGRGMPAGRKVKAVIPGGSSAP 296 Query: 299 FLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCR 358 L LD+ MEFE++ + G+ + +D MV + + F+A ESCG CTPCR Sbjct: 297 VLGADELDVAMEFEALKVKQTMAGSGGVIVMDDTTCMVRSLWRVARFYAEESCGQCTPCR 356 Query: 359 DGLPWSVKILRALERGEGQPGDIETLEQLCRF------LGPGKTFCAHAPGAVEPLQSAI 412 +G PW ++LR +E G G+PGDI+ L + +G G T CA A P S + Sbjct: 357 EGTPWQTRLLRKIEEGRGEPGDIDMLSNVASSIAPYPPIGLGNTICALGDAAALPTHSFL 416 Query: 413 KYFREEFEAGIKQPFSNTHLI 433 FR+EFEA I++ Sbjct: 417 MRFRDEFEAHIREHRCPFGDK 437 >UniRef50_Q608Y1 NADH dehydrogenase I, F subunit n=4 Tax=Gammaproteobacteria RepID=Q608Y1_METCA Length = 427 Score = 482 bits (1242), Expect = e-135, Method: Composition-based stats. Identities = 251/414 (60%), Positives = 320/414 (77%), Gaps = 1/414 (0%) Query: 12 PLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGL 71 PLT ++ D V L EY + GYEG +K L +P ++ +VKD+GL+GRGGAGF TGL Sbjct: 4 PLTRNIKSDGSTVTLAEYLASGGYEGLKKTLAEFAPLDVQQRVKDSGLRGRGGAGFPTGL 63 Query: 72 KWSLMP-KDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYI 130 KWS +P + + +YL+ N DEMEPG +KDRLL+E PH L+EG++I+A+A++A Y+ Sbjct: 64 KWSFVPMGEGAPRTKYLVVNGDEMEPGAFKDRLLLEGDPHQLIEGVVIAAYAIQANIAYV 123 Query: 131 FLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSL 190 FLRGEY AA LR+AIAEA GLLG++I+G+GF +L +HT AGRYICGEETAL+NSL Sbjct: 124 FLRGEYRLAAARLRQAIAEAEAQGLLGEDILGSGFSLDLRLHTSAGRYICGEETALLNSL 183 Query: 191 EGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLM 250 EG+RANPR+KPPFP SG +GKPT VNNVETLCN+P IL NGVEWY+ +S++ + GTK+ Sbjct: 184 EGKRANPRAKPPFPQVSGLFGKPTIVNNVETLCNLPHILRNGVEWYKGLSRTGEPGTKIY 243 Query: 251 GFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPME 310 G SGRV++PG WELP GTTAREI+E++AGGMRDG + K + PGGA TDFL HLD+PM+ Sbjct: 244 GVSGRVRSPGAWELPMGTTAREIIEEHAGGMRDGYRLKGYLPGGASTDFLLPEHLDIPMD 303 Query: 311 FESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRA 370 + SIGKAGSRLGT + +D + V +V NLE FFA+ESCGWCTPCRDGLPW+V +L Sbjct: 304 YGSIGKAGSRLGTGTMILLDDKTCPVQMVLNLERFFAQESCGWCTPCRDGLPWTVSLLEG 363 Query: 371 LERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIK 424 L G G+P D+ETLE+LC LGPG TFCA APGA+EPLQSA+K+FR +FE ++ Sbjct: 364 LIEGRGRPEDLETLERLCGLLGPGNTFCALAPGAMEPLQSALKHFRADFERYLQ 417 >UniRef50_B1ZTP3 NADH dehydrogenase (Quinone) n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZTP3_OPITP Length = 668 Score = 482 bits (1242), Expect = e-135, Method: Composition-based stats. Identities = 175/423 (41%), Positives = 259/423 (61%), Gaps = 4/423 (0%) Query: 6 RTPETH-PLTWRLRDDKQPVWLDEYRSK-NGYEGARKALTGLSPDEIVNQVKDAGLKGRG 63 +TPE + R + P +++Y GY+ RKAL L+P++++ ++K +GL+GRG Sbjct: 214 KTPERQARIVLRNCGEVDPDSVEDYLRHAQGYQALRKALFELTPEKVIGELKASGLRGRG 273 Query: 64 GAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFAL 123 GAGF T +KW L + RY++CN DE +PG + DR ++E PH ++EGM+++ FA+ Sbjct: 274 GAGFPTWMKWQLTRAQPAEQ-RYVICNGDEGDPGAFMDRSVLESDPHSVLEGMILAGFAM 332 Query: 124 KAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEE 183 A RGY ++R EY +A + RAIA+A EAGLLG+NI+G+GF F + GAG ++CGEE Sbjct: 333 GASRGYFYIRAEYPKAVERVERAIAQAREAGLLGENILGSGFSFNAKIRLGAGAFVCGEE 392 Query: 184 TALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSK 243 TALI S+EGRR +P +PP+P+ G WG+PT +NNVETL N+PAIL G WY K Sbjct: 393 TALIASIEGRRGSPSPRPPYPSVRGLWGRPTAINNVETLANIPAILLRGGAWYAGYGTEK 452 Query: 244 DAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEA 303 GTK+ +G+V N L E+P GTT R+I+ + GG+ D + KA Q GG + E Sbjct: 453 SKGTKVFAVTGKVMNAQLVEVPMGTTLRQIVYEICGGVLDDKEIKAVQTGGPSGGVIPEK 512 Query: 304 HLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPW 363 HLD P+ +E++ + GS +G+ + +D +MV + R F ESCG C PCR G Sbjct: 513 HLDTPVSYETLQQLGSIMGSGGMLVMDKNDSMVDVARFYLRFCVDESCGKCAPCRIGGYQ 572 Query: 364 SVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGI 423 ++IL + RG G D+ TL ++C + + C A P+ S ++YF EE++A I Sbjct: 573 MLQILDRISRGRGSAEDLVTLRRICTAMQKA-SLCGLGQTAPNPVLSTLRYFEEEYKAYI 631 Query: 424 KQP 426 + Sbjct: 632 EGG 634 >UniRef50_Q39TW5 Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit n=5 Tax=cellular organisms RepID=Q39TW5_GEOMG Length = 635 Score = 481 bits (1239), Expect = e-134, Method: Composition-based stats. Identities = 164/424 (38%), Positives = 250/424 (58%), Gaps = 4/424 (0%) Query: 22 QPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDES 81 +D+Y + GY K L ++P++++ ++K + L+GRGG GF KW + Sbjct: 147 DSKSMDDYLAIGGYSALSKVLFQMTPEDVMGEIKKSNLRGRGGGGFPAWRKWEESR-NAP 205 Query: 82 MNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAV 141 I+Y++ NADE +PG + DR L+E PH ++EG++I A+A+ A+ G+I++R EY A Sbjct: 206 DPIKYVIVNADEGDPGAFMDRALIEGNPHSILEGLIIGAYAVGAHEGFIYVRQEYPLAVE 265 Query: 142 NLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKP 201 N+ AI +A+E G +GK+I+G+GFDF + VH GAG ++CGE +AL+ +LEGR PR K Sbjct: 266 NINLAIRQASERGFVGKDILGSGFDFTVKVHMGAGAFVCGESSALMTALEGRAGEPRPKY 325 Query: 202 PFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGL 261 A G W P+ +NNVET NV I+ G +W+ + + GTK+ G++ N GL Sbjct: 326 IHTAVKGVWDHPSVLNNVETWANVTQIITKGADWFTSYGTAGSTGTKIFSLVGKITNTGL 385 Query: 262 WELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRL 321 E+P G T R+I+ GG+ G KFKA Q GG + EA LDLP++F+ + KAGS + Sbjct: 386 VEVPMGVTLRDIITKVGGGIPGGKKFKAVQTGGPSGGCIPEAMLDLPVDFDELTKAGSMM 445 Query: 322 GTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDI 381 G+ + +D + MV + R +F ESCG CTPCR+G+ + +L + G+G+ GDI Sbjct: 446 GSGGMIVMDEDTCMVDIARYFIDFLKDESCGKCTPCREGIRQMLAVLTRITVGKGKEGDI 505 Query: 382 ETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLIN-GIQPNL 440 E LE+L G CA A P+ S I+YFR+E+EA I++ I ++ Sbjct: 506 ELLEELAES--TGAALCALGKSAPNPVLSTIRYFRDEYEAHIREKKCPALSCKEMIAFHI 563 Query: 441 LKER 444 E+ Sbjct: 564 DPEK 567 >UniRef50_D0LDB1 NADH-quinone oxidoreductase, F subunit n=45 Tax=Bacteria RepID=D0LDB1_GORB4 Length = 706 Score = 481 bits (1239), Expect = e-134, Method: Composition-based stats. Identities = 197/430 (45%), Positives = 271/430 (63%), Gaps = 6/430 (1%) Query: 8 PETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGF 67 PET P+ R + LD Y NGY+G RKAL PD+I+ +K +GL+GRGGAGF Sbjct: 269 PETIPVLSRHWQEPDSWTLDNYLQHNGYQGLRKALDTP-PDDIIELIKASGLRGRGGAGF 327 Query: 68 STGLKWSLMPKDESM--NIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKA 125 G+KWS +P+ + YL+ NADE EPGT KD LM PH LVEG++I+A+A++A Sbjct: 328 PVGMKWSFIPQSDDPDAPPHYLVVNADESEPGTCKDMPLMLASPHSLVEGVIIAAYAIRA 387 Query: 126 YRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETA 185 + +I++RGE LR A+ +A AG LG++I+G+GFD EL VH GAG YICGEETA Sbjct: 388 HHAFIYVRGEVASVIRRLRTAVDDAYAAGYLGRDILGSGFDLELVVHAGAGAYICGEETA 447 Query: 186 LINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDA 245 L++SLEGRR PR +PPFPA +G + PT VNNVE++ +VP I+ NGV+W++++ K Sbjct: 448 LLDSLEGRRGQPRLRPPFPAVAGLYASPTVVNNVESIASVPPIIRNGVDWFRSMGTEKSP 507 Query: 246 GTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHL 305 G L SG V+ PG +E G T RE+L+ AGG+R G + K W PGG+ T LT HL Sbjct: 508 GFTLYSLSGHVERPGQYEAALGVTLRELLDR-AGGVRAGHQLKFWTPGGSSTPLLTAEHL 566 Query: 306 DLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSV 365 D+P+++E +G AGS LGT D +V V +F+A ESCG CTPCR+G W V Sbjct: 567 DVPLDYEGVGAAGSMLGTKALQIFDETTCVVGAVLRWTQFYAHESCGKCTPCREGTYWLV 626 Query: 366 KILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 ++L+ LE G D++TL + + GK+FCA GA P+ S++KYFR+E++A + Sbjct: 627 QLLKRLETEGGTTADLDTLADVTNSI-VGKSFCALGDGAGSPIVSSLKYFRDEYDAHLAS 685 Query: 426 PFSNTHLING 435 Sbjct: 686 G-CPFEARFA 694 >UniRef50_B8FFJ2 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=8 Tax=Bacteria RepID=B8FFJ2_DESAA Length = 1044 Score = 481 bits (1238), Expect = e-134, Method: Composition-based stats. Identities = 168/428 (39%), Positives = 255/428 (59%), Gaps = 2/428 (0%) Query: 9 ETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFS 68 + L P ++ Y + GY+ + L+G++P+++ +V DA L+GRGGAGF Sbjct: 133 KQERRVLALCGRIDPTSIEHYIAAGGYQALVRVLSGMAPEQVAQEVIDAKLRGRGGAGFP 192 Query: 69 TGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRG 128 GLKW + + +Y++CNADE +PG + DR ++E PH ++EGM+I AFA+ A G Sbjct: 193 AGLKWKFARQSSANP-KYIICNADEGDPGAFMDRAILEGDPHSVIEGMIIGAFAMGARYG 251 Query: 129 YIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALIN 188 +I++R EY A +L AIA+A E G+LG+NI+GTGF F L + GAG ++CGEETAL+ Sbjct: 252 FIYVREEYPIAVEHLNCAIAQAGELGILGENILGTGFSFSLSLKMGAGAFVCGEETALMA 311 Query: 189 SLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTK 248 S+EG+R PR++PPFPA SG GKP+ +NNVET NVP IL NG WY + GTK Sbjct: 312 SIEGKRGMPRARPPFPAQSGVDGKPSNINNVETFANVPLILKNGAGWYAQVGTENSKGTK 371 Query: 249 LMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLP 308 + +G+V N GL E+P GT+ RE++ D GG+ G KFKA Q GG + L+L Sbjct: 372 IFSLAGKVNNTGLVEVPIGTSIREVVFDIGGGIPKGRKFKAVQMGGPSGGCVPAQFLNLS 431 Query: 309 MEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKIL 368 ++++++ K G+ +G+ + +D MV + R F ESCG C+PCR G ++IL Sbjct: 432 IDYDTLQKIGAIMGSGGMVVMDENNCMVEIARFFLAFTQSESCGKCSPCRLGTTQLLEIL 491 Query: 369 RALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFS 428 + G G+ DIET++++ R + + C +P S ++YF +E+E I + Sbjct: 492 TRITTGRGRLEDIETIKEIGRTM-TEASLCGLGQNCAKPAISTLQYFLKEYEDHILENRC 550 Query: 429 NTHLINGI 436 + + Sbjct: 551 AGAVCKSM 558 >UniRef50_Q56222 NADH-quinone oxidoreductase subunit 1 n=16 Tax=Bacteria RepID=NQO1_THET8 Length = 438 Score = 481 bits (1238), Expect = e-134, Method: Composition-based stats. Identities = 197/423 (46%), Positives = 274/423 (64%), Gaps = 7/423 (1%) Query: 8 PETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGF 67 P + + LD Y GYE A++ L +PDE++ +VK +GL+GRGGAGF Sbjct: 11 PRFERTLYAHVGKEGSWTLDYYLRHGGYETAKRVLKEKTPDEVIEEVKRSGLRGRGGAGF 70 Query: 68 STGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYR 127 TGLKWS MPKD+ YL+CNADE EPG++KDR ++E +PHLL+EGM+++ +A++A Sbjct: 71 PTGLKWSFMPKDDG-KQHYLICNADESEPGSFKDRYILEDVPHLLIEGMILAGYAIRATV 129 Query: 128 GYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALI 187 GYI++RGEY AA L +AI EA G LGKN+ GT F F+L VH GAG YICGEETAL+ Sbjct: 130 GYIYVRGEYRRAADRLEQAIKEARARGYLGKNLFGTDFSFDLHVHRGAGAYICGEETALM 189 Query: 188 NSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGT 247 NSLEG RANPR KPPFPA SG WGKPT +NNVETL +V I+ G +W+ + + G Sbjct: 190 NSLEGLRANPRLKPPFPAQSGLWGKPTTINNVETLASVVPIMERGADWFAQMGTEQSKGM 249 Query: 248 KLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLT--EAHL 305 KL SG VK PG++ELP GTT RE++ ++AGG + +A PGG+ T L E L Sbjct: 250 KLYQISGPVKRPGVYELPMGTTFRELIYEWAGGPLEP--IQAIIPGGSSTPPLPFTEEVL 307 Query: 306 DLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLP-WS 364 D PM +E + GS LGT + + ++MV + NL F+A ESCG CTPCR+G+ + Sbjct: 308 DTPMSYEHLQAKGSMLGTGGVILIPERVSMVDAMWNLTRFYAHESCGKCTPCREGVAGFM 367 Query: 365 VKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIK 424 V + + G+G+ D+E LE L + G++FC A AV P++ ++++F++++ A + Sbjct: 368 VNLFAKIGTGQGEEKDVENLEALLPLI-EGRSFCPLADAAVWPVKGSLRHFKDQYLALAR 426 Query: 425 QPF 427 + Sbjct: 427 EKR 429 >UniRef50_O27592 NADP-reducing hydrogenase, subunit C n=5 Tax=cellular organisms RepID=O27592_METTH Length = 630 Score = 481 bits (1237), Expect = e-134, Method: Composition-based stats. Identities = 169/430 (39%), Positives = 253/430 (58%), Gaps = 4/430 (0%) Query: 15 WRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWS 74 R P + Y + GY G +AL + PDE++ +VKD+GL+GRGGAGF T LKWS Sbjct: 137 LRRCGLIDPENMGHYLATGGYRGLMRAL-EMEPDEVIEEVKDSGLRGRGGAGFPTWLKWS 195 Query: 75 LMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRG 134 L ++ S ++YL+CNADE +PG + +R L+E PH L+EG+LI+++A+ A YI+ R Sbjct: 196 LCRQEASE-VKYLICNADEGDPGAFMNRSLIEGDPHALLEGILIASYAVGAREAYIYCRA 254 Query: 135 EYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRR 194 EY A LR AI++ GLLGK+I+G+GFD ++ + GAG ++CGEETALI+S+EG+R Sbjct: 255 EYPLALERLRVAISDLRNLGLLGKDILGSGFDLDIKIKEGAGAFVCGEETALISSIEGKR 314 Query: 195 ANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSG 254 PR++PPFP T G WGKPT +NNVETL V I+ +G +++ ++ + GTK G Sbjct: 315 GMPRTRPPFPTTRGLWGKPTVINNVETLAAVSMIMQHGADYFNSLGTPESRGTKTFSLVG 374 Query: 255 RVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESI 314 V+ GL E+P GTT RE++ D GG+ DG + KA Q GG L +D ++++S+ Sbjct: 375 DVRRTGLIEVPLGTTLREVIFDIGGGVVDG-ELKAVQIGGPSGGCLPAELIDTGIDYDSL 433 Query: 315 GKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERG 374 AG+ +G+ + + MV L R EF RESCG C PCR G + IL + G Sbjct: 434 TSAGAIMGSGGLVVLSDRTCMVELARYFLEFTQRESCGKCVPCRVGTRQMLMILNDIVEG 493 Query: 375 EGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLIN 434 G+P D + L + + + C + P+ + ++YF +E+ IK + Sbjct: 494 SGRPEDPDILRDVAESVR-AASLCGLGQTSPNPVLTTLRYFEDEYHDHIKGRCTAAACSE 552 Query: 435 GIQPNLLKER 444 + + E+ Sbjct: 553 LMHYMIDPEK 562 >UniRef50_Q39QB2 NADH dehydrogenase I, F subunit n=5 Tax=Bacteria RepID=Q39QB2_GEOMG Length = 591 Score = 481 bits (1237), Expect = e-134, Method: Composition-based stats. Identities = 170/434 (39%), Positives = 256/434 (58%), Gaps = 3/434 (0%) Query: 12 PLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGL 71 + P LD Y +++G++ K + ++P ++++VK AGL+GRGG GF TG+ Sbjct: 113 RIVMTGCGQIDPESLDAYLAEDGFKAIEKCVKEMTPAAVIDEVKKAGLRGRGGGGFPTGM 172 Query: 72 KWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIF 131 KWS ++YL+CNADE +PG + DR ++E P+ ++EGM+I+A+A+ +GY++ Sbjct: 173 KWSFCAATPG-KLKYLICNADEGDPGAFMDRSILEGDPYCIIEGMMIAAYAIGCSKGYVY 231 Query: 132 LRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLE 191 +R EY A L++A+ E G LG NI G GFDF+L + GAG ++CGEETAL+ S+E Sbjct: 232 VRAEYPLAIERLQKALDVCREKGYLGHNIQGWGFDFDLIIKKGAGAFVCGEETALMASIE 291 Query: 192 GRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMG 251 G R PR +PPFPA G W KPT +NNVET NV I+ G EWY ++ GTK+ Sbjct: 292 GERGMPRPRPPFPAVKGLWAKPTNINNVETFANVRHIINKGAEWYASLGTDTTKGTKIFA 351 Query: 252 FSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEF 311 +G+VK+ GL E+P G T R+++ + GG+ + KFKA Q GG + LD P+++ Sbjct: 352 VTGKVKHTGLVEVPAGMTVRDVIYNVCGGIANNRKFKAVQAGGPSGGCIPPEVLDTPVDY 411 Query: 312 ESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRAL 371 +S+ KAG+ +G+ + +D MV + R F ESCG C PCR GL + IL + Sbjct: 412 DSLIKAGAMMGSGGLVVMDETTCMVDVARFFLSFTRMESCGKCVPCRIGLKVMLDILERI 471 Query: 372 ERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTH 431 G GQ GDIETL ++ + + C A P+ S I+YFREE+EA I ++ Sbjct: 472 TAGRGQAGDIETLLEMGSTIKKA-SLCGLGQTAPNPILSTIRYFREEYEAHITDKRCPSN 530 Query: 432 LING-IQPNLLKER 444 + +++E+ Sbjct: 531 CCKELLLWQVIEEK 544 >UniRef50_Q9XAQ9 NADH-quinone oxidoreductase subunit F n=56 Tax=Bacteria RepID=NUOF_STRCO Length = 449 Score = 477 bits (1227), Expect = e-133, Method: Composition-based stats. Identities = 194/418 (46%), Positives = 268/418 (64%), Gaps = 4/418 (0%) Query: 12 PLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGL 71 P+ D+ + LD YR GYEG RKAL ++PD+++ VK++GL+GRGGAGF TG+ Sbjct: 19 PVLSAFWDEDESWTLDVYRRHEGYEGLRKALA-MAPDDLIAYVKESGLRGRGGAGFPTGM 77 Query: 72 KWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIF 131 KW +P+ + YL+ NADE EPGT KD L+ PH L+EG++I+ +A+++ +I+ Sbjct: 78 KWQFIPQGDGKP-HYLVVNADESEPGTCKDIPLLFANPHSLIEGIVIACYAIRSSHAFIY 136 Query: 132 LRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLE 191 LRGE + L A+ EA AG LG+NI+G+G D L VH GAG YICGEETAL++SLE Sbjct: 137 LRGEVVPVLRRLHEAVREAYAAGFLGENILGSGLDLTLTVHAGAGAYICGEETALLDSLE 196 Query: 192 GRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMG 251 GRR PR +PPFPA +G + PT VNNVE++ +VPAIL G +W++++ K G L Sbjct: 197 GRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPAILNKGKDWFRSMGSEKSPGFTLYS 256 Query: 252 FSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEF 311 SG V PG +E P G T R++L+ +GGMR G + K W PGG+ T T+ HLD+P+++ Sbjct: 257 LSGHVAGPGQYEAPLGITLRQLLD-MSGGMRPGHRLKFWTPGGSSTPMFTDEHLDVPLDY 315 Query: 312 ESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRAL 371 E +G AGS LGT D +V V EF+A ESCG CTPCR+G W V++LR + Sbjct: 316 EGVGAAGSMLGTKALQCFDETTCVVRAVTRWTEFYAHESCGKCTPCREGTYWLVQLLRDI 375 Query: 372 ERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSN 429 E G+GQ D++ L + + GK+FCA GA P+ S++KYFREE+E I Sbjct: 376 EAGKGQMSDLDKLNDIADNIN-GKSFCALGDGAASPIFSSLKYFREEYEEHITGRGCP 432 >UniRef50_C0GLX1 NADH dehydrogenase (Quinone) n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GLX1_9DELT Length = 593 Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats. Identities = 155/424 (36%), Positives = 235/424 (55%), Gaps = 2/424 (0%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 + + P LD Y + GY+ AR A + P EI+ ++K + L+GRGGAGFSTG K Sbjct: 114 VVLAHCGEIDPEDLDAYLNVKGYQAARNAFNNMHPVEIIEKIKRSKLRGRGGAGFSTGHK 173 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 W K + +Y++CN +E +PG + DR +ME PH ++EGM+I A A+ A +GYI++ Sbjct: 174 WEFAYKVDDQ-EKYVVCNGNESDPGAFADRCIMEGDPHAVIEGMMICARAIGAGKGYIYI 232 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 R Y A LR A+ + E GLLGKNI +G D ++ ++ G +ICGE TAL+ S+EG Sbjct: 233 RDGYSLAVKRLRLALKQCYERGLLGKNIFESGHDLDIKLYPAPGAFICGEATALVQSIEG 292 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGF 252 +RA P + + +G GKPT +NN ETL NVP IL NG W+ + GTK+ Sbjct: 293 KRAMPTPRMTRTSENGIRGKPTVINNAETLANVPKILRNGASWFAGLGTDTSGGTKVFSL 352 Query: 253 SGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFE 312 +G+VK+ GL E+P G T R+++ GG+ FK Q GG + + LD +++E Sbjct: 353 TGKVKSNGLVEVPMGATLRDVVYKVGGGIDQDRAFKGIQLGGPTGGCVPGSCLDSRVDYE 412 Query: 313 SIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALE 372 S+ AG+ +G+ + +D +V + + ESCG CTPCR G+ +IL + Sbjct: 413 SLALAGTIMGSGGMVVLDETNCIVDTAKFFLDITQAESCGKCTPCRIGMRRMYEILERIT 472 Query: 373 RGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHL 432 G G+ GD+E LE L + + C A P+ S ++YFR+E+ I+ + Sbjct: 473 IGNGRDGDVELLEDLGSHIR-ATSLCGFGMTAPNPVLSTVRYFRDEYNIHIRDRKCPALV 531 Query: 433 INGI 436 + Sbjct: 532 CKSL 535 >UniRef50_A7NPE5 NADH-quinone oxidoreductase, F subunit n=9 Tax=Bacteria RepID=A7NPE5_ROSCS Length = 451 Score = 471 bits (1211), Expect = e-131, Method: Composition-based stats. Identities = 194/428 (45%), Positives = 264/428 (61%), Gaps = 5/428 (1%) Query: 7 TPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAG 66 +P + R D + D Y GYE R A+T +P +IV VKD+GL+GRGGAG Sbjct: 20 SPLAEHIVLRDLDIENIADFDVYLQHGGYEALRIAVTERTPADIVQTVKDSGLRGRGGAG 79 Query: 67 FSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAY 126 F TG+KW +PK + RYLLCN DE EPGT+ + ++++ PH L+EG+ ISA+A++A Sbjct: 80 FPTGVKWGFLPK--GVYPRYLLCNCDESEPGTFNNHQIIDRNPHQLIEGIAISAYAIEAN 137 Query: 127 RGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETAL 186 YI++RGE+ AA L RAIA+A G LG+NI GTG+D +++VH GAG YICGEETAL Sbjct: 138 LAYIYIRGEFAAAARRLERAIAQAYARGFLGRNIFGTGYDLDIYVHRGAGAYICGEETAL 197 Query: 187 INSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAG 246 + SLEG+ PR +PPFPA +G +GKPT +NNVETL NVP I+ +G WY+ K G Sbjct: 198 MESLEGKIGQPRLRPPFPAVAGLYGKPTIINNVETLTNVPMIVRHGAVWYRQFGTEKSPG 257 Query: 247 TKLMGFSGRVKNPGLWELPFGTTAREILE--DYAGGMRDGLKFKAWQPGGAGTDFLTEAH 304 TK+ SG VK PG +E PFGT RE++ +Y GMR K PGGA +LT Sbjct: 258 TKVFSVSGHVKRPGNYEAPFGTPLRELIFSPEYCQGMRGNHNVKIVVPGGASAGWLTADD 317 Query: 305 LDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWS 364 LD+ M++E++ GS LG+ + +D +N V + ++EFF ESCG CTPCR+G + Sbjct: 318 LDVTMDYEALAAKGSMLGSGGVIVLDERVNAVEVAYKMDEFFKHESCGKCTPCREGTYFL 377 Query: 365 VKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIK 424 VK+L + G G+ DI L + + G FC AV P++SA++ F EFE I Sbjct: 378 VKVLHRITHGHGRQDDIPLLHDVYNQM-AGNCFCLLGESAVVPIRSALRLFPHEFERAIA 436 Query: 425 QPFSNTHL 432 Q + H Sbjct: 437 QAGNGRHD 444 >UniRef50_A6FCN1 NuoF2 NADH I CHAIN F n=1 Tax=Moritella sp. PE36 RepID=A6FCN1_9GAMM Length = 425 Score = 469 bits (1208), Expect = e-131, Method: Composition-based stats. Identities = 191/421 (45%), Positives = 266/421 (63%), Gaps = 3/421 (0%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 + + ++ Y GY+G +K LT SPD++++ VK + L+GRGGAGF TGLK Sbjct: 5 VLLKYITHPDSTNIEFYEKTGGYQGLKKILTTYSPDKVIDAVKASNLRGRGGAGFPTGLK 64 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 WS +PKD+ I YL CNADE EPGT+KDRLLME+ PH ++EGM+I+A+A++A YI++ Sbjct: 65 WSFVPKDDG-KIHYLCCNADEGEPGTFKDRLLMERDPHRVIEGMIIAAYAIRAEVAYIYI 123 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 RGEY + + +AI A G LGKNI T F ++VH GAG YICGEETAL+ S+EG Sbjct: 124 RGEYGLSIDMITQAIKAAYAKGYLGKNIFNTDFCLNIYVHKGAGAYICGEETALLESIEG 183 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGF 252 RR P+ KPPFPA SG + PT +NNVET V I A GV+W+ +I G +L G Sbjct: 184 RRGQPKLKPPFPAVSGLYDCPTVINNVETFVCVTHIFAKGVDWFTSIGPDDAPGPRLFGL 243 Query: 253 SGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFE 312 SG+++NPG+ ELP G E++ DY GG G KFKA PGG + A LD+ M F Sbjct: 244 SGQLQNPGIVELPMGLPLSELVYDYGGGPLTG-KFKAVIPGGLSAPMIPLAGLDVKMNFA 302 Query: 313 SIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALE 372 + A S +G+A +A+D ++ ++ R + EFF+ ESCG C PCR+GLPW+ KIL +E Sbjct: 303 DLATADSMMGSAAVIALDETASIPAVGRRIAEFFSHESCGKCAPCREGLPWASKILNRIE 362 Query: 373 RGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHL 432 G+G+PGD+E L+ +C + +FCA GA +++ +K+F E++A I Q Sbjct: 363 SGQGRPGDLEQLQVICGGVF-NNSFCALGVGAAWAIRATLKHFPHEYDALITQQKIPIRD 421 Query: 433 I 433 Sbjct: 422 R 422 >UniRef50_C7NU21 NADH dehydrogenase (Quinone) n=5 Tax=cellular organisms RepID=C7NU21_HALUD Length = 634 Score = 467 bits (1201), Expect = e-130, Method: Composition-based stats. Identities = 166/425 (39%), Positives = 247/425 (58%), Gaps = 3/425 (0%) Query: 10 THPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFST 69 + P L+EY +++GY ++L+ SP+E++ +VK++ L+GRGG GF T Sbjct: 147 QQRVVLGNSGLVDPESLEEYVARDGYFALWESLSAGSPEEVIEEVKESNLRGRGGGGFPT 206 Query: 70 GLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGY 129 G+KW + +++ ++YL+CNADE +PG Y DR L+E P+ ++EGM I+ +AL A +GY Sbjct: 207 GMKWEFLAGNDAD-LKYLICNADEGDPGAYMDRTLLESDPYAVLEGMTIAGYALGAEKGY 265 Query: 130 IFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINS 189 I++R EY A L+ AI +A EAGLLG++I G GFDF+L + GAG ++CGEETA+INS Sbjct: 266 IYVRAEYPLAIERLQHAIEQAREAGLLGQDIFGEGFDFDLEIKKGAGAFVCGEETAMINS 325 Query: 190 LEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKL 249 LEG R P+ +PP+PA G W +PT VNNVET NVPAIL NG EW+ +I + GTK+ Sbjct: 326 LEGGRGMPKPRPPYPADEGLWAEPTNVNNVETWANVPAILRNGAEWFADIGTEESGGTKV 385 Query: 250 MGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPM 309 +G V+N GL E+P GT E++ + G G +FKA Q GG + H + P+ Sbjct: 386 FSVTGDVENTGLVEVPLGTRLEEVVFEIG-GGTTGGEFKAVQTGGPSGGVIPREHAETPI 444 Query: 310 EFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILR 369 ++E++ + GS +G+ + +D MV R EF ESCG C PCR G +++L Sbjct: 445 DYETLMELGSMMGSGGMIVMDESTCMVDQSRFFLEFSVDESCGKCPPCRYGTKQMLEMLE 504 Query: 370 ALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSN 429 + G P I L L + + C A P+ S + YF +E+ ++ Sbjct: 505 GITNGAADPDVISELRSLGDSM-EEMSLCGLGQTAANPVMSTLDYFEDEYRNHVEDEECP 563 Query: 430 THLIN 434 Sbjct: 564 AGDCE 568 >UniRef50_B6ALB9 NADH dehydrogenase (Quinone) n=3 Tax=Leptospirillum RepID=B6ALB9_9BACT Length = 634 Score = 466 bits (1200), Expect = e-130, Method: Composition-based stats. Identities = 173/431 (40%), Positives = 250/431 (58%), Gaps = 3/431 (0%) Query: 11 HPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTG 70 P+ + ++ +L+ YR +GY L + Q++ +G+ GRGG F Sbjct: 185 EPVVFTGLRAEKTRYLERYREDHGYRALESLLKTGDAEAAFEQIRLSGVAGRGGGAFPMY 244 Query: 71 LKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYI 130 K + K+ RYL+CNADE EPGT+KDR +ME+ PH L+EGM I+A + A G+I Sbjct: 245 RKLDAVRKN--PPPRYLVCNADEGEPGTFKDRYIMERDPHSLIEGMAIAARIIGAEEGFI 302 Query: 131 FLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSL 190 +LR EY + L +AIAEA AGLLG I+G+ F F L ++ GAG YICGEET+LINSL Sbjct: 303 YLRSEYPHSFHILEKAIAEARNAGLLGPRILGSDFSFRLRLYRGAGAYICGEETSLINSL 362 Query: 191 EGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLM 250 EG+RA PR+KPP + G WGKPT NVETL N+P+IL NG +WY + K GTKL Sbjct: 363 EGKRAYPRNKPPHLSEVGLWGKPTEEQNVETLANLPSILRNGGDWYARLGDVKSPGTKLF 422 Query: 251 GFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPME 310 SG + PGL+E+P G + R ++ED GG+ G K P G+ + L HLDL ++ Sbjct: 423 CLSGHIARPGLYEIPLGMSLRSLIEDLGGGIPGGRSLKGLLPAGSASKMLLPRHLDLSLD 482 Query: 311 FESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRA 370 + SI + G+ LG+A + +D + MV L + F ESCG CTPCRDG +IL Sbjct: 483 YPSIAEVGAFLGSASVIVMDDSVCMVDLAYWIAAFSHHESCGQCTPCRDGTEDVYEILLK 542 Query: 371 LERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNT 430 + +GEG+P ++ L+ + ++ + C A S+++YF +E++A I T Sbjct: 543 IIQGEGKPAYLDLLKSIGTYMR-EASICGLGQSAPNIPLSSMEYFEDEWKAHIVDHVCPT 601 Query: 431 HLINGIQPNLL 441 + + + +L Sbjct: 602 GVCSMRRNGIL 612 >UniRef50_A5FKK2 NADH dehydrogenase subunit F n=18 Tax=Bacteria RepID=A5FKK2_FLAJ1 Length = 456 Score = 464 bits (1194), Expect = e-129, Method: Composition-based stats. Identities = 193/428 (45%), Positives = 255/428 (59%), Gaps = 15/428 (3%) Query: 10 THPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFST 69 + + + + YR GY KAL L+PDE+ +VK +GL+GRGGAGF Sbjct: 2 SQKILLDKINVPGIKTYEVYRQNGGYASVEKALKTLTPDEVTEEVKKSGLRGRGGAGFPA 61 Query: 70 GLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGY 129 G+KWS + K R+L+CNADE EPGT+KDR LME +PHLL+EGM+ S++AL A Y Sbjct: 62 GMKWSFIDKKSGRP-RHLVCNADESEPGTFKDRFLMEYIPHLLIEGMITSSYALGANLSY 120 Query: 130 IFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINS 189 I++RGEY+ L RAIAEA AG LGKNI+G+G+D EL VH GAG YICGEETALI S Sbjct: 121 IYIRGEYMWVFKILERAIAEAKAAGWLGKNILGSGYDLELHVHCGAGAYICGEETALIES 180 Query: 190 LEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKL 249 LEG+R NPR KPPFPA SG W PT VNNVET+ VP I+ N + Y I + GTKL Sbjct: 181 LEGKRGNPRIKPPFPAVSGLWANPTVVNNVETIATVPWIVNNSGDDYAKIGIGRSTGTKL 240 Query: 250 MGFSGRVKNPGLWELPFGTTAREIL--EDYAGGMRDGLKFKAWQPGGAGTDFLTEAHL-- 305 + SG +KNPG++E+ G + E + ++Y GGM KA+ PGG+ L + Sbjct: 241 ISASGHIKNPGVYEIELGLSVDEFMNSDEYLGGMSSSRPLKAFVPGGSSVPILPAELIFK 300 Query: 306 -----DLPMEFESIG----KAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTP 356 D M +ES+ GS LG+ + + +V N F+ ESCG CTP Sbjct: 301 TANGEDRLMTYESLSDGGFATGSMLGSGGFIVYNDTACVVRNTWNFARFYHHESCGQCTP 360 Query: 357 CRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFR 416 CR+G W KIL +E G+G+ DIE L + + G T C A P+ +AI++FR Sbjct: 361 CREGTGWLEKILWRIENGQGREEDIELLWSIQSKI-EGNTICPLGDAASWPVAAAIRHFR 419 Query: 417 EEFEAGIK 424 +EFE ++ Sbjct: 420 DEFEYHVR 427 >UniRef50_Q2LS97 NADH-quinone oxidoreductase chain F n=2 Tax=Syntrophus aciditrophicus SB RepID=Q2LS97_SYNAS Length = 638 Score = 464 bits (1194), Expect = e-129, Method: Composition-based stats. Identities = 174/429 (40%), Positives = 252/429 (58%), Gaps = 4/429 (0%) Query: 8 PETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGF 67 P P+ +D Y K GY +KAL PD+++ VKD+GL+GRGGAGF Sbjct: 207 PGQTQRLTEKIGSIDPLSVDSYLEKGGYAAIKKALAEYQPDDVIAIVKDSGLRGRGGAGF 266 Query: 68 STGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYR 127 G+KWS +PK + +Y++CNADE EPGTYKDR+LME+ PH L+EGM++ +A A Sbjct: 267 PAGVKWSFLPKGDMQ--KYVICNADEGEPGTYKDRILMEENPHGLLEGMMLCGYATGATV 324 Query: 128 GYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALI 187 GYI++RGEY + L+RAI +A E G+LG NI G+ F F++F+ G G Y+CGEE++L+ Sbjct: 325 GYIYIRGEYRRSIERLQRAIDQAREKGILGDNIFGSSFRFDIFIKEGGGAYVCGEESSLM 384 Query: 188 NSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGT 247 NS+EG+R PR +PPFPA +G KP+ VNNVET +VP I+ G WY+++ GT Sbjct: 385 NSMEGKRGYPRFRPPFPAGAGFLAKPSNVNNVETYASVPMIIEKGAAWYKSVGLETCTGT 444 Query: 248 KLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDL 307 KL SG++ GL E+P GTT REI+E + G+++G FK Q GG+ L +DL Sbjct: 445 KLYCLSGKLNRTGLVEMPMGTTLREIIETFGKGIKNGKTFKFAQVGGSAGGILGPELMDL 504 Query: 308 PMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKI 367 P++ +S KAG LG+ + + D + V + ++ FF ESCG C PCR G + Sbjct: 505 PLDIDSTIKAGVTLGSGVVLVCDEDTCPVDFLLDVLNFFEHESCGQCVPCRVGTRQLHHL 564 Query: 368 LRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPF 427 R G PGD++ + + + + + CA + P+ + +KYFRE+F Sbjct: 565 ARKFATGTAVPGDLDLMVEKAKLMK--NSLCALGQSPILPITTMLKYFREDFLRHCDPSL 622 Query: 428 SNTHLINGI 436 N + Sbjct: 623 CCPECANSL 631 >UniRef50_B2KCG6 NADH dehydrogenase (Quinone) n=3 Tax=Bacteria RepID=B2KCG6_ELUMP Length = 620 Score = 464 bits (1194), Expect = e-129, Method: Composition-based stats. Identities = 166/437 (37%), Positives = 248/437 (56%), Gaps = 3/437 (0%) Query: 9 ETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFS 68 + H + + P ++EY S GY K L L + + ++K +GL+GRGG GF Sbjct: 137 KQHRILLKDCGKINPEDINEYISHGGYSALAKCLNELKEEGTIEEIKKSGLRGRGGGGFP 196 Query: 69 TGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRG 128 TGLKW + +Y++CN DE +PG Y DR L+E PH ++EGM+I FA A +G Sbjct: 197 TGLKWQFTRASKG-KQKYMICNGDEGDPGAYMDRSLLEGNPHAVIEGMIIGGFATGASKG 255 Query: 129 YIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALIN 188 ++R EY A ++ AI A +AGLLGKNI+G+ F ++L + GAG ++CGEETAL+ Sbjct: 256 LFYIRAEYPLAISRVQAAIDAAYKAGLLGKNILGSKFSYDLEIRYGAGAFVCGEETALMR 315 Query: 189 SLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTK 248 S+EG+R P KPPFP+ G WG PT +NNVETL N+P I+ NG EW+ I K GTK Sbjct: 316 SIEGQRGTPTPKPPFPSVKGLWGCPTSINNVETLANIPLIIYNGSEWFSKIGSGKSTGTK 375 Query: 249 LMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLP 308 + +G+VK+ GL E+P G T +E++ D G DG KA Q GG + D+P Sbjct: 376 VFAMTGKVKSSGLIEVPMGITIKEVVFDIGEGAYDGRVIKAVQTGGPSGGVIPAEKFDMP 435 Query: 309 MEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKIL 368 + +ES+ +AGS +G+ + +D+ MV + + EF ESCG C PCR G +KIL Sbjct: 436 ITYESLIEAGSMMGSGGLIVMDNSDCMVDIAKFYLEFCVEESCGKCVPCRIGGYQLLKIL 495 Query: 369 RALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFS 428 + + G+ E + L + + CA A P+ S +K F EF+ +K+ Sbjct: 496 KDISEGKEVGDYKEKIGNLALTMQKA-SLCALGQTAPNPVLSCLKSFGHEFDEHVKEKHC 554 Query: 429 NTHLINGI-QPNLLKER 444 T + + + ++++E+ Sbjct: 555 PTGKCSSLVRYSVIEEK 571 >UniRef50_C1F9D7 NADH dehydrogenase I, F subunit n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F9D7_ACIC5 Length = 437 Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 174/431 (40%), Positives = 243/431 (56%), Gaps = 4/431 (0%) Query: 1 MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLK 60 M + P+ P+ V +D Y GY RK L + PD I+N++K +GL+ Sbjct: 1 MAYLTTHPDVVPVVSYRFGRG-AVDIDRYIELEGYSSVRKCL-EMEPDAIINEMKTSGLR 58 Query: 61 GRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISA 120 GRGGAGF TG+KWS +PK + +Y+L N DE EPGT KDRL+ E PH ++EG +I+ Sbjct: 59 GRGGAGFPTGMKWSFVPKQSAKP-KYVLVNGDESEPGTCKDRLIFEHDPHSVIEGTMIAG 117 Query: 121 FALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYIC 180 A+ A G+I+LRGEY + +A+A A G LGK I G+ DF++ V TGAG Y Sbjct: 118 LAIGAKMGFIYLRGEYRYLIQIMEKAVAAAYAKGFLGKGIFGSQHDFDVVVQTGAGAYEV 177 Query: 181 GEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNIS 240 GEE+AL+ SLEG+R PR KPPFPA G +G PT +NN ETL +VP I G Y Sbjct: 178 GEESALMESLEGKRGVPRIKPPFPAVVGLYGGPTVINNAETLASVPHIFRIGAAEYAKYG 237 Query: 241 KSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFL 300 ++ GT+L SG V+ PG++ELP G ++++ + AGG+ G K KA PGG+ L Sbjct: 238 TERNGGTRLFCISGHVEKPGVYELPMGYNLKKMIYEVAGGILGGKKLKAVVPGGSSVPVL 297 Query: 301 TEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDG 360 +D+ M+F+ + KAGS LG+ + +D + MV +F+ ESCGWC PCR+G Sbjct: 298 LPDEIDIGMDFDQVAKAGSMLGSGGVVVLDESVCMVEFALRTIKFYRHESCGWCIPCREG 357 Query: 361 LPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFE 420 W K + L G DI ++ + + G+TFC A P +K FR+EFE Sbjct: 358 TDWLQKSITRLHMGGAVDKDINNIQYIAENM-LGRTFCPLGDAAAMPTIGFVKKFRKEFE 416 Query: 421 AGIKQPFSNTH 431 + H Sbjct: 417 DHLNGKGCPYH 427 >UniRef50_Q2FP97 NADH dehydrogenase (Quinone) n=2 Tax=Methanomicrobiales RepID=Q2FP97_METHJ Length = 562 Score = 460 bits (1184), Expect = e-128, Method: Composition-based stats. Identities = 169/411 (41%), Positives = 239/411 (58%), Gaps = 2/411 (0%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 + R P +DEY GY A KALT + PD I+++VK +GL+GRGGAGF GLK Sbjct: 150 VILRDSGLINPEDIDEYIGIGGYFAAYKALTSMKPDAIIDEVKRSGLRGRGGAGFPAGLK 209 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 W + K ++++CNADE +PG Y +R ME PH+L+EGMLI A+A+ G I++ Sbjct: 210 WEITKKAPGE-EKFIVCNADEGDPGAYMNRNEMESDPHMLLEGMLIGAYAMGVSEGLIYI 268 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 R EY A L A+ +A GLLGKNI TGFDF++ + TGAG ++CGE TAL S+EG Sbjct: 269 RAEYPLAIERLMLALDQARTYGLLGKNIFNTGFDFDIRIATGAGAFVCGESTALAASIEG 328 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGF 252 + PR +PP G +GKPT +NNVET CNVP I+A G WY +I + GTK+ Sbjct: 329 KTGRPRLRPPRLTEKGVFGKPTDLNNVETWCNVPVIIAKGALWYSSIGAKGNTGTKVFSL 388 Query: 253 SGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFE 312 G+V N G+ E+P GT+ I+ D G G + KA Q GG + D P++FE Sbjct: 389 VGKVDNIGMVEVPLGTSLHSIIYDIGNGGALGKEVKAVQTGGPSGGCIPVRLFDTPVDFE 448 Query: 313 SIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALE 372 S+ + G+ +G+ + +D + NMV + R F + ESCG C PCR+GL + IL + Sbjct: 449 SLNQVGTMMGSGGLVVMDEDTNMVDIARYFINFASGESCGKCVPCREGLKHMLLILNRIV 508 Query: 373 RGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGI 423 G+G DI L +L + + C A P+ + ++YF+EE++ I Sbjct: 509 AGKGTRQDIGLLRELAETVQK-TSLCGLGQTAPNPVLTTMQYFKEEYDDLI 558 >UniRef50_C1A8Y9 NADH-quinone oxidoreductase chain F n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8Y9_GEMAT Length = 442 Score = 460 bits (1183), Expect = e-128, Method: Composition-based stats. Identities = 185/437 (42%), Positives = 250/437 (57%), Gaps = 8/437 (1%) Query: 5 IRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGG 64 P P+ + D + L +R++ GYE KAL P EI N VK++GL+GRGG Sbjct: 6 PSHPRETPVLSKYFGDPEARTLAGWRARGGYEALEKALAT-DPVEIQNIVKESGLRGRGG 64 Query: 65 AGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALK 124 AGF TG+KWS M D YL CNADE EPGT+KDR +M PH LVEG+ + A A+ Sbjct: 65 AGFPTGMKWSFMKPDG--KTHYLCCNADESEPGTFKDREIMRWTPHGLVEGVALGAHAIY 122 Query: 125 AYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEET 184 A YI++RGE+ E + A+ EA AG+LG N MG+G ++ VH GAG YICGEET Sbjct: 123 AETAYIYIRGEFTEPYARVCAAVEEAYAAGILGANAMGSGKRVDVHVHRGAGAYICGEET 182 Query: 185 ALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISK--- 241 AL+NSLEGRR NPR KPPFPA +G +GKPT +NNVETL VP I+ NG EWY+ + Sbjct: 183 ALMNSLEGRRGNPRIKPPFPAVAGLFGKPTTINNVETLTAVPYIVKNGAEWYKQFGRADN 242 Query: 242 SKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLT 301 K GTKL G + PG +E+ G +E L D GG G + KA PGG+ LT Sbjct: 243 PKSIGTKLFSVCGNISRPGNYEVALGFPFKEFLYDLCGGPLPGREIKAVIPGGSSVPILT 302 Query: 302 EAHLDLP-MEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDG 360 + M++E + G+ +G+ + D +MV + L F+A ESC C+ CR+G Sbjct: 303 REEAESALMDYEGMVAVGTMMGSGGVIVFDDRQDMVRQIARLTRFYAHESCAQCSQCREG 362 Query: 361 LPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFE 420 W+ +I+ + G+G D++TL + + GKT C + P+ S +K FR EFE Sbjct: 363 TAWTTRIMERIRDGQGTAEDLDTLLSIADNM-SGKTICVLSDSCATPVVSGLKKFRHEFE 421 Query: 421 AGIKQPFSNTHLINGIQ 437 A I S + ++ Sbjct: 422 AKIAANRSQVTVPGALR 438 >UniRef50_Q9RU92 NADH dehydrogenase I, F subunit n=1 Tax=Deinococcus radiodurans RepID=Q9RU92_DEIRA Length = 444 Score = 458 bits (1178), Expect = e-127, Method: Composition-based stats. Identities = 203/413 (49%), Positives = 267/413 (64%), Gaps = 8/413 (1%) Query: 12 PLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGL 71 P + + LD Y+ GY+G R+A L PD ++ +VK +GL+GRGGAGF+TGL Sbjct: 20 PTLYAQVGQPRSWTLDTYQRGGGYQGVRRAFA-LGPDAVIEEVKKSGLRGRGGAGFATGL 78 Query: 72 KWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIF 131 KWS MP ++ ++CNADE EPGT+KDR LM + PH L+EGMLI +A++A RGYI+ Sbjct: 79 KWSFMPLNDGKP-HLIICNADESEPGTFKDRYLMSEDPHQLIEGMLIGGYAMRASRGYIY 137 Query: 132 LRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLE 191 +RGEY+ AA L AI EA AGLLGK+I+G+GFDF+L VH GAG YICGEETAL+NSLE Sbjct: 138 IRGEYVLAAERLWAAIHEARAAGLLGKDILGSGFDFDLQVHRGAGAYICGEETALMNSLE 197 Query: 192 GRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMG 251 G RANPR KPPFPA +G +G PT +NNVET C IL G +W+ + K G KL Sbjct: 198 GLRANPRLKPPFPAAAGLYGLPTTINNVETFCAATHILKYGADWHAGMGTEKSKGMKLFQ 257 Query: 252 FSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFL--TEAHLDLPM 309 SG V PG++ELP GT RE++ D+AGG + KA PGG L +E LD PM Sbjct: 258 ISGPVARPGVYELPLGTPFRELIYDWAGGPTED--IKAIIPGGISCQLLKWSEDILDTPM 315 Query: 310 EFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLP-WSVKIL 368 ++ES+ AGS LGT + ++V N F+ ESCG CTPCR+G+ W V++ Sbjct: 316 DYESLAAAGSSLGTGGVTLIPAAASIVDTTWNAVRFYGHESCGKCTPCREGISGWMVRMY 375 Query: 369 RALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEA 421 L RG GQPGD + + +G G++FCA A + P+ S+I+ FREE++A Sbjct: 376 EKLARGHGQPGDTNLILDMADNIG-GRSFCALADACLGPVLSSIRLFREEYDA 427 >UniRef50_Q3A639 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A639_PELCD Length = 571 Score = 458 bits (1178), Expect = e-127, Method: Composition-based stats. Identities = 168/413 (40%), Positives = 257/413 (62%), Gaps = 3/413 (0%) Query: 14 TWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKW 73 R R P + +Y ++GY+GA KALT +S +E++N+ +GL+GRGGAGF GLKW Sbjct: 157 VMRNRGLIDPAKIKDYIGRDGYQGAIKALTEMSSEEVINEAIGSGLRGRGGAGFPIGLKW 216 Query: 74 SLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLR 133 +++ I+Y+LCNADE +PG + DR +ME PH ++EG++I A A+ A++GYI+ R Sbjct: 217 KFAAAEKND-IKYILCNADEGDPGAFMDRNVMESDPHSIIEGLIIGAKAIGAHQGYIYCR 275 Query: 134 GEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGR 193 EY A L +AI +A LLG+NI+GTGF F++ V+ GAG ++CGEETAL+ S+EG+ Sbjct: 276 AEYPLAIETLNKAINQARALDLLGENILGTGFSFDISVYEGAGAFVCGEETALMRSIEGK 335 Query: 194 RANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFS 253 R NPR KPPFPA +G + KPT +NNVETL N+P I+ G +WY+ I K GTK+ + Sbjct: 336 RGNPRPKPPFPAKAGLFEKPTVLNNVETLSNIPQIIVKGADWYKEIGTEKSPGTKIFSIT 395 Query: 254 GRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFES 313 G ++N G E+P GTT I+ G + KA Q GG + + ++ + +++E+ Sbjct: 396 GDIENVGCVEVPIGTTVDTIVNQI-GIVSPDKNLKAVQLGGPSGGCIPKDYMHVAVDYET 454 Query: 314 IGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALER 373 + + G+ +G+ +A+ + + V + + +F E+CG C P R+G ++IL ++ Sbjct: 455 LQEYGAIMGSGGLIAMSDDKSGVDIAKFFIDFCQDEACGKCLPGREGTKQMLQILEKIDS 514 Query: 374 GEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQP 426 GEG P DIETL+ LC + CA AV P+ S ++YF EE++ +K Sbjct: 515 GEGSPDDIETLKVLCGVIRK-TALCALCKTAVNPVLSTLRYFPEEYQEAVKTK 566 >UniRef50_A5FXJ6 NADH dehydrogenase (Quinone) n=11 Tax=Proteobacteria RepID=A5FXJ6_ACICJ Length = 434 Score = 456 bits (1174), Expect = e-127, Method: Composition-based stats. Identities = 226/423 (53%), Positives = 296/423 (69%), Gaps = 3/423 (0%) Query: 12 PLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGL 71 PLT ++ +QP+ + Y GY RKA G+SP+ +V +VK A ++GRGGAGF G Sbjct: 7 PLTSYIQPGRQPLDIAGYERAGGYAAMRKAF-GMSPESVVEEVKRAKVRGRGGAGFPAGR 65 Query: 72 KWS-LMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYI 130 KW ++ RYL+ NADEMEPG++KDRLL+E PHL++EG++I AFA++A YI Sbjct: 66 KWEGAPRGADAPRHRYLVINADEMEPGSFKDRLLLEAAPHLMIEGIIIGAFAVQAETAYI 125 Query: 131 FLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSL 190 F+RGEY+ A L RA+AEA G LG +I+G+GF + VH GRYICGE +AL ++L Sbjct: 126 FVRGEYVLAMERLSRAVAEAEARGYLGADILGSGFSLTIHVHGSGGRYICGEASALFSAL 185 Query: 191 EGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSK-DAGTKL 249 EG+RA PR++PP TSG WGKPT VNNVETLC VP+I+ G +W+ +S+S + GTKL Sbjct: 186 EGKRAVPRTRPPRSTTSGLWGKPTVVNNVETLCCVPSIIERGADWFLGLSRSATEGGTKL 245 Query: 250 MGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPM 309 G SGRV PGLWELP GT EI+E++AGGMR+G + +A PGGA T F+ + D+PM Sbjct: 246 YGVSGRVNRPGLWELPVGTPLNEIIEEHAGGMREGYEARAVLPGGASTAFIMRENFDVPM 305 Query: 310 EFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILR 369 +F+S+GK GS LGTA + +D + V L+RN+E FFA+ESCGWCTPCRDGLPW +IL Sbjct: 306 DFDSVGKIGSWLGTANILVLDQKRCPVGLLRNIEHFFAQESCGWCTPCRDGLPWVERILT 365 Query: 370 ALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSN 429 ALE GEG+P DIE L FLGPG+TFC APGA+ PL+S +K+FREEFE + + Sbjct: 366 ALEAGEGEPDDIELLAHHVDFLGPGRTFCDLAPGAMAPLRSGLKFFREEFERHVSERHCP 425 Query: 430 THL 432 H Sbjct: 426 WHD 428 >UniRef50_A7HJL0 NADH dehydrogenase (Quinone) n=5 Tax=Bacteria RepID=A7HJL0_FERNB Length = 632 Score = 456 bits (1173), Expect = e-127, Method: Composition-based stats. Identities = 173/427 (40%), Positives = 258/427 (60%), Gaps = 4/427 (0%) Query: 19 DDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPK 78 + +++Y ++ GY K L+G+ EI+ Q+K AGL+GRGG GF TGLKW Sbjct: 159 GTSECESIEDYMARGGYTSLAKVLSGMDRKEIIEQIKAAGLRGRGGGGFPTGLKWEAAYN 218 Query: 79 DESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIE 138 + I+Y++CNADE +PG + +R L+E+ PH ++EGM+I+A+ + A +GY ++R EY Sbjct: 219 SKGD-IKYVVCNADEGDPGAFMNRTLLERDPHSVLEGMIIAAYTIGAQKGYAYIRAEYPI 277 Query: 139 AAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPR 198 A +AI +A E GLLG+NI+GT F FEL+V GAG ++CGEETAL+ S+EG+R PR Sbjct: 278 AVEMFNKAIEDAKEYGLLGENILGTDFSFELYVKEGAGAFVCGEETALLASIEGKRGVPR 337 Query: 199 SKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKN 258 +PPFPA SG WGKPT +NNVE+ NVP I+ +GVE Y+ K GTK+ +G +K Sbjct: 338 PRPPFPAQSGLWGKPTLINNVESYANVPKIIRDGVENYRKRGVEKSPGTKMFSVTGPLKL 397 Query: 259 PGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAG 318 G+ E+ FGTT R IL++ GG +G K KA Q GG L E DLP++++++ G Sbjct: 398 TGIIEIQFGTTLRYILDNICGGTSNGQKIKAIQIGGPSGACLPEELFDLPLDYDTLKSVG 457 Query: 319 SRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQP 378 + +G+ +A+ + MV + R +F RESCG C PCR+G + IL +G+ Sbjct: 458 AMVGSGGIVAITEDRCMVEVARFFLDFTKRESCGKCVPCREGTTQAYNILEKFTQGKATY 517 Query: 379 GDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLINGI-Q 437 D+ETLEQL + + C A P+ S +KYF+ E+ I + + + + Sbjct: 518 EDLETLEQLSEIIKTA-SLCGLGKTAPNPIISTLKYFKNEYIEHI-EGKCPSGMCTAFKK 575 Query: 438 PNLLKER 444 ++ E+ Sbjct: 576 YIIIPEK 582 >UniRef50_B5IPC7 Formate dehydrogenase, beta subunit n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IPC7_9CHRO Length = 606 Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats. Identities = 159/419 (37%), Positives = 235/419 (56%), Gaps = 6/419 (1%) Query: 12 PLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGL 71 + P +D+ + Y ++ L +P+++ +QVK +GL+GRGGAG+ TGL Sbjct: 117 AVVLESCGVVNPESIDDALAHGSYAQLKRVLLECTPEQVRDQVKRSGLRGRGGAGYPTGL 176 Query: 72 KWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIF 131 KW + + R ++CNADE +PG + DR ++E PH L+EGM I+AFA+ A +GY++ Sbjct: 177 KWDTV-ALQPPGPRTVVCNADEGDPGAFMDRSVLESDPHRLIEGMAIAAFAVGADQGYVY 235 Query: 132 LRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLE 191 +R EY A LR A+ +A GLLG I G+ F+ L V GAG Y+CGEETAL+ S++ Sbjct: 236 VRAEYPLAIERLRLALRQARSKGLLGNGIAGSSFNLRLEVRVGAGAYVCGEETALLASIQ 295 Query: 192 GRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMG 251 G+R PR +PPFPA G WG PT +NNVETL ++P IL G +WY + GTK+ Sbjct: 296 GQRGTPRPRPPFPAQVGLWGAPTLINNVETLASIPVILREGGDWYAAMGTEGSKGTKVFA 355 Query: 252 FSGRVKNPGLWELPFGTTAREILEDY----AGGMRDGLKFKAWQPGGAGTDFLTEAHLDL 307 SG V+ GL E+P GT+ R +++ GG KA Q GG + LD Sbjct: 356 LSGAVERTGLVEVPMGTSLRTVVQTIGGGVPGGEGPDGGVKAVQTGGPSGGCIPAHLLDT 415 Query: 308 PMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKI 367 P+++ES+ GS +G+ + + M + R+ F ESCG C PCR G +++ Sbjct: 416 PVDYESLRALGSMMGSGGLVVMGERTAMPEVARHFMRFSVNESCGKCVPCRAGTVQLLQL 475 Query: 368 LRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQP 426 L GD+E LE LC +G + C A P+ S ++YFR+E++A ++P Sbjct: 476 LDRFVERRASLGDLERLEALCGMVG-ATSLCGLGQAAPNPVLSTLRYFRQEYQAACREP 533 >UniRef50_B8HVQ4 NADH dehydrogenase (Quinone) n=11 Tax=Bacteria RepID=B8HVQ4_CYAP4 Length = 543 Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats. Identities = 158/411 (38%), Positives = 243/411 (59%), Gaps = 3/411 (0%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 + P ++EY + GY+ K L ++P E+V ++ +GL+GRGG G+ TGLK Sbjct: 119 IVREYSGKIDPERIEEYIAVGGYQSLHKVLYEMTPAEVVTEITRSGLRGRGGGGYPTGLK 178 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 W+ + K +Y++CN DE +PG + DR ++E PHL++EGM I+ +A+ A G+I++ Sbjct: 179 WATVAKMPGDQ-KYVICNGDEGDPGAFMDRSVLESDPHLVLEGMAIAGYAMGANHGFIYV 237 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 R EY A L++AI +A + GLLG I + FDF++ + GAG ++CGEETALI S+EG Sbjct: 238 RAEYPLAIQRLQKAIQQAKKYGLLGSQIFDSHFDFKIEIRIGAGAFVCGEETALIASIEG 297 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGF 252 R NPR +PP+PA G W PT +NNVET N+ I+ G +WY +I K GTK+ Sbjct: 298 GRGNPRPRPPYPAQFGLWHCPTLINNVETFANIAPIVREGADWYASIGTEKSKGTKIFAL 357 Query: 253 SGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFE 312 +G+++N GL E+P G + R+I+E+ GG+ +G + KA Q GG + LD P++++ Sbjct: 358 TGKIRNNGLIEVPMGISLRQIVEEMGGGVPEG-QVKAVQTGGPSGGCIPADLLDTPVDYD 416 Query: 313 SIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALE 372 S+ GS +G+ + +D NMV + EF ESCG C PCR G +L L Sbjct: 417 SLTALGSMMGSGGMVVMDESTNMVEVAHFYMEFCRGESCGKCIPCRAGTVQLYGLLTKLL 476 Query: 373 RGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGI 423 + P D++ L++LC + + C A P+ S ++YF EE+EA + Sbjct: 477 HKQATPADLDKLKELCAMVK-ETSLCGLGMSAPNPVLSTLRYFGEEYEALL 526 >UniRef50_D1C356 NADH dehydrogenase (Quinone) n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C356_SPHTD Length = 575 Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats. Identities = 154/436 (35%), Positives = 240/436 (55%), Gaps = 5/436 (1%) Query: 1 MKNIIRTP---ETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDA 57 + + + P + P +++Y ++ GY+ KA+ ++P+E+VN+VK + Sbjct: 128 VPPLNQHPFLAGQRRVLMADWGIIDPESIEDYIARGGYQAWIKAIFDMTPEEVVNEVKIS 187 Query: 58 GLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGML 117 ++GRGGAGF G+KW + ++ +Y++ N+ E EP +KDR L+E PHL++EG++ Sbjct: 188 NVRGRGGAGFPAGIKWESGRRTQAWP-KYVIANSHEGEPNVFKDRRLIESNPHLVLEGIM 246 Query: 118 ISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGR 177 I +AL+ GY ++ GE+ A R+A+ +A E GLLG N++G+G + V TG G Sbjct: 247 IGCYALETPHGYNYVGGEHKLAIERFRKAVDQAYELGLLGDNVLGSGVSCHIRVRTGGGA 306 Query: 178 YICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQ 237 YICGE +AL+ S+ G+R PR+KPP G W +PT +NN ET N+P I+ NG WY Sbjct: 307 YICGEGSALMYSVMGQRGQPRTKPPRSVEEGVWKRPTVLNNTETFANIPGIIRNGGAWYA 366 Query: 238 NISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGT 297 + K GTKL+ G V+ G+ E+ G RE++ GGMR+G FK Q GG Sbjct: 367 AMGTEKSTGTKLITMQGPVQRIGVVEIEMGMPMREVIFGLFGGMREGYVFKGVQTGGVSA 426 Query: 298 DFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPC 357 L E LD+P++F+S+ G LG+ + D + V R L+EF ESC C PC Sbjct: 427 GPLREDQLDVPVDFDSLTPLGGMLGSGGFVVFDQSVCAVDFARYLQEFNRYESCAKCVPC 486 Query: 358 RDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFRE 417 R G P V+I+ + G+ + GD+ +E+ R + + C A P I+ F E Sbjct: 487 RLGNPALVEIIERIRLGQARQGDLALIEETSRPI-IDLSLCGLGQVAPMPTLGMIRAFPE 545 Query: 418 EFEAGIKQPFSNTHLI 433 +F A I++ + Sbjct: 546 DFAAHIEEHRCPAGVC 561 >UniRef50_B4SQT1 NADH-quinone oxidoreductase, F subunit n=16 Tax=cellular organisms RepID=B4SQT1_STRM5 Length = 446 Score = 450 bits (1159), Expect = e-125, Method: Composition-based stats. Identities = 178/429 (41%), Positives = 252/429 (58%), Gaps = 7/429 (1%) Query: 3 NIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTG-LSPDEIVNQVKDAGLKG 61 + P H + + P + Y GY RK L + P++++ VK +GL+G Sbjct: 10 PVGPAPLPHQVVYTTLHYDTPWSYESYLKTGGYAALRKILEEKIPPEQVIEMVKASGLRG 69 Query: 62 RGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAF 121 RGGAGF TGLKWS MPK +Y+LCN+DE EPGT KDR ++ PH +VEGM I+ + Sbjct: 70 RGGAGFPTGLKWSFMPKGNMQ--KYILCNSDESEPGTCKDRDILRYNPHSVVEGMAIACY 127 Query: 122 ALKAYRGYIFLRGE-YIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYIC 180 A + GY +LRGE + E + +A+A+A G LGKN+MG+G D +++ GAG YIC Sbjct: 128 ATGSTVGYNYLRGEFHHEPFEHFEQALADAYANGWLGKNVMGSGVDIDIYGALGAGAYIC 187 Query: 181 GEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNIS 240 GEETAL+ SLEG++ PR KPPFPA G +GKP+ +NN ET +VPAI+ NG EW++ +S Sbjct: 188 GEETALMESLEGKKGQPRYKPPFPANFGLYGKPSTINNTETYGSVPAIIRNGPEWFKGLS 247 Query: 241 KSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFL 300 + + G K SG V+N G +E+P GTT ++L AGG+R G K PGG L Sbjct: 248 LTANGGPKCFSVSGCVQNGGNFEVPLGTTFHDLL-QMAGGLRPGRTLKGAIPGGVSMPVL 306 Query: 301 TEAHL-DLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRD 359 T A L DLPM++++I GS LG+ + +D + V + +FF +ESCG CTPCR+ Sbjct: 307 TAAELKDLPMDYDTIRALGSGLGSGAIVVLDDSVCCVKFACRISQFFHKESCGQCTPCRE 366 Query: 360 GLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEF 419 G W ++L + G+ D+ L+ + + G T CA A P+Q ++ F +EF Sbjct: 367 GTGWMHRVLERIVAGKATMEDLHQLKAVAGQI-EGHTICAFGEAAAWPIQGFLRQFWDEF 425 Query: 420 EAGIKQPFS 428 E I S Sbjct: 426 EYYIVNGHS 434 >UniRef50_C6X0Z6 NADH-ubiquinone oxidoreductase chain F n=2 Tax=Bacteria RepID=C6X0Z6_FLAB3 Length = 467 Score = 449 bits (1156), Expect = e-125, Method: Composition-based stats. Identities = 193/427 (45%), Positives = 260/427 (60%), Gaps = 16/427 (3%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 L + + + D YR + GY+ KAL ++PD IV +VK +GL+GRGGAGF TG+K Sbjct: 21 LLLKDAHIEGIRFYDVYRRQGGYDAVDKALK-MTPDVIVEEVKTSGLRGRGGAGFPTGMK 79 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 WS + K E + RYL+ NADE EPGT+KDR LME LPHLL+EGM+IS++AL A YI++ Sbjct: 80 WSFLAKPEGVP-RYLVVNADESEPGTFKDRYLMEFLPHLLIEGMIISSYALGANTAYIYI 138 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 RGEY L +AI EA AG LGKNI+GTG+D E++VH GAG YICGEETAL+ SLEG Sbjct: 139 RGEYSWIPDILEQAINEAKAAGFLGKNILGTGYDLEIYVHRGAGAYICGEETALLESLEG 198 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGF 252 +R NPR KPPFPA G W PT VNNVET+ V I+ G Y I + GTKL+ Sbjct: 199 KRGNPRLKPPFPAVKGLWESPTVVNNVETIAAVVPIMNIGGAEYAKIGVGRSTGTKLISA 258 Query: 253 SGRVKNPGLWELPFGTTAREIL--EDYAGGMRDGLKFKAWQPGGAGTDFLTEAHL----- 305 G + PG++E+ T E + ++Y GG+ +G K KA PGG+ + L Sbjct: 259 CGNINKPGVYEIDMTITVEEFIYSDEYCGGIPNGKKLKACIPGGSSVPIVPANLLLKTIN 318 Query: 306 --DLPMEFESIG----KAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRD 359 M +ES+ G+ +G+ + +D + +V +L F+A ESCG CTPCR+ Sbjct: 319 GEPRYMNYESLADGGFATGTMMGSGGFIVLDEDQCVVKHTMSLAHFYAHESCGQCTPCRE 378 Query: 360 GLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEF 419 G PW +IL+ +E G+G DI+ L + R + G T C A P+ +AI++FR+EF Sbjct: 379 GTPWMYRILKNIETGKGTMADIDLLWDIQRKI-EGNTICPLGDAAAWPVAAAIRHFRDEF 437 Query: 420 EAGIKQP 426 E I P Sbjct: 438 EWHIDNP 444 >UniRef50_B9KZ80 NAD-dependent formate dehydrogenase beta subunit n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KZ80_THERP Length = 574 Score = 449 bits (1154), Expect = e-124, Method: Composition-based stats. Identities = 154/418 (36%), Positives = 240/418 (57%), Gaps = 2/418 (0%) Query: 16 RLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSL 75 P ++++ + GY KAL ++P+E++ +VK + L+GRGGAGF TG+KW Sbjct: 147 EHAGIIDPESIEDFIAIGGYRAFLKALFEMTPEEVIAEVKASNLRGRGGAGFPTGIKWES 206 Query: 76 MPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGE 135 + + +Y++ N+ E EP +KDR L+E PHL++EG+LI +AL+ GY ++ GE Sbjct: 207 GRRTPARP-KYVVVNSHEGEPNVFKDRRLLESNPHLVLEGLLIGCYALETPCGYNYIGGE 265 Query: 136 YIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRA 195 + A +RA+ +A E GLLG +I+G+GF + + TG G YICGE +AL+ ++ G+R Sbjct: 266 HALALQRFQRAVEQAYELGLLGDDILGSGFSCHVRIRTGGGAYICGEGSALMYAIMGQRG 325 Query: 196 NPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR 255 PR+KPP G W +PT +NN ET ++PAI+ NG WY ++ + GTKL+ G Sbjct: 326 QPRTKPPRSVEEGLWRRPTVLNNTETFASIPAIIQNGGSWYASLGTKESTGTKLVTMQGP 385 Query: 256 VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIG 315 VK G+ E+ FG + RE++ D GG+R+G + K Q GG L E LD+P++FE++ Sbjct: 386 VKYLGVAEIEFGLSMRELIFDVFGGLREGYRLKGIQTGGVSAGPLREDELDVPIDFEALT 445 Query: 316 KAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGE 375 G+ +G+ +A D + V R L F ESCG CTPCR G P V+IL + G Sbjct: 446 PLGAMVGSGGFVAFDESVCAVDFARYLVAFSRYESCGKCTPCRLGTPALVEILDRIRHGF 505 Query: 376 GQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLI 433 G+P D++ ++ + + + C A PL ++ FR+EF I + + Sbjct: 506 GRPEDLDIIQYASKHI-IELSLCGLGQVAPMPLLGMLERFRDEFIEHITERRCRAGVC 562 >UniRef50_D2R5G5 NADH dehydrogenase (Quinone) n=3 Tax=Planctomycetaceae RepID=D2R5G5_9PLAN Length = 450 Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats. Identities = 181/426 (42%), Positives = 255/426 (59%), Gaps = 14/426 (3%) Query: 12 PLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGL 71 P+ + Y GY +K L ++P+++ VK +GL+GRGGAGF TGL Sbjct: 6 PVLLAQVGKPESYTRKVYERDGGYSALKKVLK-MTPNDVKETVKSSGLRGRGGAGFPTGL 64 Query: 72 KWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIF 131 KW+ +P++ I Y NADE EPGT+ +R+LME PH ++EG++I+ FA +A Y + Sbjct: 65 KWTFLPQNHPGPI-YFCLNADESEPGTFNNRILMEDDPHQVLEGIIIACFATQARAAYFY 123 Query: 132 LRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLE 191 +R EY A ++RAI E EAG LG+NI+G+G+ ++ +H GAG YICGEET LI SLE Sbjct: 124 MRCEYPTAYERVKRAIEECYEAGYLGENILGSGYTLDIHLHRGAGAYICGEETGLIESLE 183 Query: 192 GRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDA------ 245 G+RA PR KPPFPA GA+ KPT VNNVET V I NGV+W+++I + D Sbjct: 184 GKRAWPRIKPPFPAVEGAFRKPTVVNNVETCACVTQIFRNGVDWFKSIGIAPDPNNPRDA 243 Query: 246 ---GTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTE 302 G KL SG V PG +E P G T ++++ D+ GG+ G K KA PGG LT Sbjct: 244 GSYGPKLYCLSGHVNKPGCYEAPLGITVKDLINDFGGGVWKGRKAKAVIPGGISMGLLTG 303 Query: 303 AHLDLPMEFESIGKAGS-RLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGL 361 L P++F GK G LGTA + +D + +MV + N FF+ ESCG CTPCR+G Sbjct: 304 DELHCPLDFNGPGKFGCLGLGTAAVVVMDDQTSMVDFLLNSCRFFSHESCGQCTPCREGT 363 Query: 362 PWSVKILRALERGEGQPGDIETLEQLCRFLGP--GKTFCAHAPGAVEPLQSAIKYFREEF 419 W+ +++ ++ G+G+ D++ L ++ +G G T C A GA P+++ IK FR E Sbjct: 364 SWATRMMTRIKHGQGRLKDLDLLAEIGETIGIMPGSTICGLADGAAWPIKNCIKKFRGEL 423 Query: 420 EAGIKQ 425 E IK+ Sbjct: 424 EEFIKR 429 >UniRef50_A1ALP4 NADH dehydrogenase (Quinone) n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALP4_PELPD Length = 427 Score = 447 bits (1149), Expect = e-124, Method: Composition-based stats. Identities = 165/408 (40%), Positives = 245/408 (60%), Gaps = 4/408 (0%) Query: 22 QPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDES 81 L Y+ + GY+ AL L P ++ +V +GL+GRGGAGF TG KWS + ++ Sbjct: 15 DSHTLKAYQGRGGYQALENALKTLQPIDVEKEVMASGLRGRGGAGFPTGSKWSFV--NKK 72 Query: 82 MNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAV 141 + YL CNADE EPGT+KDR + E H L+EGM+++A+AL +I++RGE+ + Sbjct: 73 APVVYLCCNADEGEPGTFKDRWIFEHNSHQLIEGMILAAYALNVRNAFIYIRGEFDLSFR 132 Query: 142 NLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKP 201 L A++EA +AG LG+NI+G+ F ++ V G G Y+CGEE++L S+EG + PR+KP Sbjct: 133 RLMDAMSEAYKAGYLGENILGSSFSCDIRVMQGGGAYVCGEESSLYTSIEGFKGYPRNKP 192 Query: 202 PFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGL 261 PFPA G + PT VNNVETL NVP I+ NG + + + K GTK+ G SG VK PGL Sbjct: 193 PFPAVQGLYKAPTVVNNVETLANVPWIMTNGAKAFSAMGTEKHPGTKIFGVSGHVKKPGL 252 Query: 262 WELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLP-MEFESIGKAGSR 320 +ELP G ++++ + GG+ +G + KA PGG+ T L ++ ++ E + + Sbjct: 253 YELPLGYPLKKLIFEECGGILNGKELKAVIPGGSSTPILLPQDVETANLDAECLSTYRTM 312 Query: 321 LGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGD 380 LG+ + + + MV L+ L F+A ESCG CTPCR+G W I+ + G+G GD Sbjct: 313 LGSGGVIVIAEGVCMVRLLHTLSRFYAHESCGQCTPCREGSAWMNDIISRIVAGKGVKGD 372 Query: 381 IETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFS 428 +E+LE++ + + G T CA A P+ + I FR EF+ I+ S Sbjct: 373 LESLERITKGI-MGNTVCALGDAASMPVINFITKFRAEFDYYIEHGRS 419 >UniRef50_O66841 NADH-quinone oxidoreductase subunit F n=6 Tax=Aquificales RepID=NUOF_AQUAE Length = 426 Score = 446 bits (1147), Expect = e-124, Method: Composition-based stats. Identities = 178/413 (43%), Positives = 247/413 (59%), Gaps = 10/413 (2%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 + + + +DEY GY+ KAL +SP+EI++ V + L+GRGGAGF TG K Sbjct: 18 MLLKRAKKPRVHSIDEYLKDGGYQALEKALN-MSPEEIIDWVDKSTLRGRGGAGFPTGKK 76 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 W ++ RY +CNADE EPGT+KDR+++E+ PHLL+EG++IS++A+ A YI++ Sbjct: 77 WKFAVQNPG--PRYFICNADESEPGTFKDRIIIERDPHLLIEGIIISSYAIGANEAYIYI 134 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 RGEY LR AI EA + G LGKNI+G+GFD E++V GAG YICGEETALI SLEG Sbjct: 135 RGEYPAGYYILRDAIEEAKKKGFLGKNILGSGFDLEIYVARGAGAYICGEETALIESLEG 194 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGF 252 +R +PR KPP+P G WGKPT VNNVET+ NVP I++ G E Y+ I S AG KL Sbjct: 195 KRGHPRLKPPYPVQKGLWGKPTVVNNVETIANVPFIISMGWEEYRYIGPSDYAGPKLFPV 254 Query: 253 SGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFE 312 SG+VK PG++ELP TT RE++ YAGG K KA G + LD+PM++ Sbjct: 255 SGKVKKPGVYELPMNTTLREVIFKYAGGTLGNKKVKAVFSGALD--CFSSEELDIPMDYS 312 Query: 313 SIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALE 372 +G GT + + E ++V + EF+ E+CG CTPCR G +L + Sbjct: 313 PLG----FGGTGTVIVLTEEDDIVEAALKIAEFYEHETCGQCTPCRVGCYEQANLLEKIY 368 Query: 373 RGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 +GE D E + + R + P + C A ++ ++ F EE+E K+ Sbjct: 369 KGEATEQDWEGFDFVNRNIQP-TSICGLGAVAGRLIRQTLEKFPEEWEKYRKK 420 >UniRef50_A9KQG9 NADH dehydrogenase (Quinone) n=6 Tax=Clostridiales RepID=A9KQG9_CLOPH Length = 628 Score = 446 bits (1147), Expect = e-124, Method: Composition-based stats. Identities = 163/440 (37%), Positives = 245/440 (55%), Gaps = 8/440 (1%) Query: 9 ETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFS 68 + + ++EY + GY+ KAL ++ + IV+++ D+ L+GRGG GF Sbjct: 142 QQTRVALEHCGHINAESINEYIAMGGYQAVAKALFDMTSESIVDEISDSYLRGRGGGGFP 201 Query: 69 TGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRG 128 TG KW+ + + +Y++CN DE +PG + DR +ME PH ++EGM+I+ A KA+ G Sbjct: 202 TGKKWAQVLRQT-EETKYVVCNGDEGDPGAFMDRSMMEGDPHRMIEGMIIAGIATKAHYG 260 Query: 129 YIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALIN 188 YI++R EY A L AI +A GLLG NI+G+GF F L + GAG ++CGE +AL Sbjct: 261 YIYVRAEYPLAVHRLETAIEQARSLGLLGCNILGSGFSFALKISQGAGAFVCGEGSALTA 320 Query: 189 SLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTK 248 S+EG R PR KPP G + KPT +NNVET CNVP+I+ G +WY+ K+ GTK Sbjct: 321 SIEGNRGMPRVKPPRTVEKGLFEKPTVLNNVETFCNVPSIILKGADWYKTYGLEKNYGTK 380 Query: 249 LMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLT----EAH 304 +G V N GL E+P GTT R+++ D GG++ G +FKA Q GG L H Sbjct: 381 AFALTGNVMNTGLIEVPMGTTLRKVIYDIGGGVKGG-EFKAVQIGGPSGGCLVLNAENDH 439 Query: 305 LDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWS 364 LD+P++F+S+ K G+ +G+ + ++ + MV + R F ESCG C PCR+G Sbjct: 440 LDMPLDFDSLKKVGAMIGSGGLVVMNDKSCMVEVARFFMNFTQNESCGKCVPCREGTKRM 499 Query: 365 VKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIK 424 +++L + G G ++ LE+L + C A P+ S IKYFR+E+ A + Sbjct: 500 LELLTDIVEGRGTLEHLDLLEELAETI-SATALCGLGKTAASPVVSTIKYFRDEYIAHVV 558 Query: 425 QPFSNTHLING-IQPNLLKE 443 + ++ E Sbjct: 559 DKKCPAGQCKALMTLKIIPE 578 >UniRef50_A8GM77 NADH-quinone oxidoreductase subunit F n=17 Tax=Proteobacteria RepID=NUOF_RICAH Length = 423 Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats. Identities = 171/411 (41%), Positives = 247/411 (60%), Gaps = 4/411 (0%) Query: 15 WRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWS 74 + Q L + + G KAL D I+ ++K +GL+GRGGAGFSTG+KWS Sbjct: 9 FTNLHGGQIHDLKSSKKR-GDWDNTKALLDKGRDFIIEEIKKSGLRGRGGAGFSTGMKWS 67 Query: 75 LMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRG 134 MPK+ YL+ NADE EPGT KDR ++ PH L+EG L+++FA+ A YI++RG Sbjct: 68 FMPKNSEKPC-YLVVNADESEPGTCKDRDILRFEPHKLIEGCLLASFAIGANNCYIYIRG 126 Query: 135 EYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRR 194 E+ A N++RA+ EA + L+GKN G+GFD +++H GAG YICGEETAL+ SLEG++ Sbjct: 127 EFYNEASNIQRALDEAYKDRLIGKNACGSGFDCNIYLHRGAGAYICGEETALLESLEGKK 186 Query: 195 ANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSG 254 PR KPPFPA G +G PT +NNVE++ VP IL W+ +I K + GTK+ SG Sbjct: 187 GMPRLKPPFPAGFGLYGCPTTINNVESIAVVPTILRRRASWFASIGKPNNTGTKIFCISG 246 Query: 255 RVKNPGLWELPFGTTAREILEDYAGGMRDGLK-FKAWQPGGAGTDFLTEAHLDLPMEFES 313 V P E G + +E++E YAGG+R G KA PGG+ L ++ ++ M+F+S Sbjct: 247 HVNKPCNVEEAMGISLKELIEKYAGGVRGGWDNLKAIIPGGSSVPLLPKSLCEVDMDFDS 306 Query: 314 IGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALER 373 + GS LGT + +D +++ + L +F+ ESCG CTPCR+G W +++ L + Sbjct: 307 LRTVGSGLGTGGIIVMDKSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWRVMIRLVK 366 Query: 374 GEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIK 424 G + +I+ L + + + G T CA A P+Q I++FR E E IK Sbjct: 367 GNAKKSEIDELLNVTKEI-EGHTICALGDAAAWPIQGLIRHFRSEIEDRIK 416 >UniRef50_B2ULY8 NADH dehydrogenase (Quinone) n=58 Tax=Bacteria RepID=B2ULY8_AKKM8 Length = 466 Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats. Identities = 181/436 (41%), Positives = 262/436 (60%), Gaps = 22/436 (5%) Query: 5 IRTPETHPLTWRLRD-DKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRG 63 P + + + +D Y + GYE +KAL G+ P ++++VK +GL+GRG Sbjct: 10 EPHPRETRRILKNVNREGWNTSIDCYLADGGYEELKKAL-GMEPRAVIDEVKKSGLRGRG 68 Query: 64 GAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFAL 123 GAGF TG+KW+ +P + + + YL+CN DE EPGT+KDR ++ Q PH L+EGM+IS++A+ Sbjct: 69 GAGFPTGVKWTFIPPNNTKPV-YLVCNCDESEPGTFKDRYIVHQDPHQLIEGMVISSYAV 127 Query: 124 KAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEE 183 A++ YI++R E+ AA + +A+ EA E G LG NI G+G++ E+ +H GAG YICGEE Sbjct: 128 GAHQAYIYMREEFPIAAEIMLKALQEARERGFLGSNIQGSGYNLEIHLHRGAGAYICGEE 187 Query: 184 TALINSLEGRRANPRSKPP-FPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKS 242 TAL+NSLEG R PR KPP FPA G +G PT VNNVE+LC V I+A G E Y Sbjct: 188 TALLNSLEGDRPYPRIKPPYFPAAIGLYGCPTIVNNVESLCQVKHIMAMGGEAYSQEGAK 247 Query: 243 KDAGTKLMGFSGRVKNPGLWELPFG-TTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLT 301 + GT+++G SG VK PG +E+ G T E+L D GG RDG +FKA PGG+ + + Sbjct: 248 RSPGTRIIGVSGDVKRPGFYEIVSGSMTFGELLYDVCGGPRDGRQFKAVIPGGSSSKVMR 307 Query: 302 EAH----------------LDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEF 345 D+P++ +SI + GS G+ + +D +M + N+ F Sbjct: 308 TDAEYKVQNPDGTMGKITFFDIPLDLDSIARHGSMSGSGAVIVMDDSRSMPWAMNNINRF 367 Query: 346 FARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAV 405 +A ESCG CTPCR+G PW +K+ + G+ P D++ L ++ + GKT CA A Sbjct: 368 YAHESCGQCTPCREGCPWMMKLSTRILEGKAAPSDVDLLIEVANQI-EGKTVCAFGEAAS 426 Query: 406 EPLQSAIKYFREEFEA 421 P Q+ + F+EEF A Sbjct: 427 WPTQAMVSKFKEEFVA 442 >UniRef50_P49821 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=426 Tax=cellular organisms RepID=NDUV1_HUMAN Length = 464 Score = 443 bits (1140), Expect = e-123, Method: Composition-based stats. Identities = 170/417 (40%), Positives = 250/417 (59%), Gaps = 12/417 (2%) Query: 20 DKQPVWLDEYRSKN---------GYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTG 70 D+ ++ + Y + G K + PD I+ ++K +GL+GRGGAGF TG Sbjct: 37 DEDRIFTNLYGRHDWRLKGSLSRGDWYKTKEILLKGPDWILGEIKTSGLRGRGGAGFPTG 96 Query: 71 LKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYI 130 LKWS M K +YL+ NADE EPGT KDR ++ PH L+EG L+ A+ A YI Sbjct: 97 LKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREILRHDPHKLLEGCLVGGRAMGARAAYI 156 Query: 131 FLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSL 190 ++RGE+ A NL+ AI EA EAGL+GKN G+G+DF++FV GAG YICGEETALI S+ Sbjct: 157 YIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYICGEETALIESI 216 Query: 191 EGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLM 250 EG++ PR KPPFPA G +G PT V NVET+ P I G W+ + +++GTKL Sbjct: 217 EGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFGRERNSGTKLF 276 Query: 251 GFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLK-FKAWQPGGAGTDFLTEAHLD-LP 308 SG V +P E +E++E +AGG+ G A PGG+ T + ++ + + Sbjct: 277 NISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPLIPKSVCETVL 336 Query: 309 MEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKIL 368 M+F+++ +A + LGTA + +D ++V + L EF+ ESCG CTPCR+G+ W K++ Sbjct: 337 MDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVM 396 Query: 369 RALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 RG+ +P +I++L ++ + + G T CA GA P+Q I++FR E E +++ Sbjct: 397 ARFVRGDARPAEIDSLWEISKQI-EGHTICALGDGAAWPVQGLIRHFRPELEERMQR 452 >UniRef50_A5GD11 NADH dehydrogenase (Quinone) n=6 Tax=Deltaproteobacteria RepID=A5GD11_GEOUR Length = 433 Score = 442 bits (1138), Expect = e-123, Method: Composition-based stats. Identities = 206/420 (49%), Positives = 279/420 (66%), Gaps = 4/420 (0%) Query: 11 HPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTG 70 + ++ + V EY + G++ +KAL LSP+++ V DA L+GRGGAGF TG Sbjct: 11 EQVLFQHNRPGRAVTFTEYCGEGGFDALKKALKELSPNDVQQLVIDANLRGRGGAGFPTG 70 Query: 71 LKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYI 130 KWS +P+ + R+L+CN DEMEPGTYKDR+L+E P LVEG++++ +A+ +I Sbjct: 71 KKWSFVPR-DLPGPRWLICNCDEMEPGTYKDRVLLEANPWSLVEGIILACYAIGVSHAFI 129 Query: 131 FLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSL 190 F+R Y AA N+RRAIAEA AGL+G NI+G+GF ++ +H AGRYICGEETAL+N+L Sbjct: 130 FIRRGYETAAGNVRRAIAEAKGAGLIGDNILGSGFSCDIDLHVSAGRYICGEETALMNAL 189 Query: 191 EGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISK-SKDAGTKL 249 EG+RANPRSKPPFPA G WG PT VNNVETL N+P I+ANG W++ ++K + AGTKL Sbjct: 190 EGKRANPRSKPPFPAVKGLWGGPTVVNNVETLANIPYIIANGPAWFKGLAKIPEAAGTKL 249 Query: 250 MGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPM 309 SG V+N ELP G +I++ GGM G +FKA PGGA T F TE H +PM Sbjct: 250 FCISGHVQNTVCMELPLGMPLGDIIDGPCGGMLPGKRFKACIPGGASTPFFTEEHRGVPM 309 Query: 310 EFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILR 369 +F+++ KAGSRLGT + D E +V NL +F+ARESCGWCTPCR+GLP+ V +L Sbjct: 310 DFDTVAKAGSRLGTGGIIVFDEETCLVGATLNLVKFYARESCGWCTPCREGLPFVVDVLA 369 Query: 370 ALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSN 429 LE G+G+ DI+ L + ++L FCA APGA+ P++ ++ F EE I + Sbjct: 370 RLEAGKGETEDIDILREHVKYLNLA--FCALAPGAMGPVEGLLRLFEEEIREHIIKRRCP 427 >UniRef50_Q6MDR1 Probable NADH-ubiquinone oxidoreductase chain F n=2 Tax=Parachlamydiaceae RepID=Q6MDR1_PARUW Length = 432 Score = 440 bits (1133), Expect = e-122, Method: Composition-based stats. Identities = 194/417 (46%), Positives = 264/417 (63%), Gaps = 3/417 (0%) Query: 12 PLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGL 71 + DD ++ Y GY+ +KA++ +S D+++ VK + L+GRGG GF TGL Sbjct: 5 RILTAYMDDPHQCKIETYERNGGYQALKKAISSISSDQLIEMVKQSWLRGRGGGGFQTGL 64 Query: 72 KWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIF 131 KWS +PK + +YL+CN DE EPGT+KDR ++E PH L+EG++++ +A+ A + +I+ Sbjct: 65 KWSFVPK-DCQISKYLVCNCDESEPGTFKDRYIIENDPHQLIEGIILACYAIGAKQAFIY 123 Query: 132 LRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLE 191 RGE+ E LR AI EA + G L + F + VH GAG YI GEETA +NSLE Sbjct: 124 CRGEFFEGNKKLRLAIQEAKKRGYLEAPLGEANFSVSIIVHPGAGAYIAGEETAQLNSLE 183 Query: 192 GRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMG 251 G RA PR KPPFPA SG + KPT VNNVETLCNV I+ GVEWYQ+I K K+ GTK+ Sbjct: 184 GYRATPRLKPPFPAVSGLYEKPTVVNNVETLCNVVHIVNRGVEWYQSIGKPKNTGTKIFQ 243 Query: 252 FSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEF 311 SG V+NPG +E P G +E+LE AG M G +FKA PGG+ LTE LD PM+F Sbjct: 244 VSGHVQNPGCFEFPLGIPLKEVLER-AGWMLPGHQFKACYPGGSSCSLLTERDLDTPMDF 302 Query: 312 ESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRAL 371 +S+ S LGTA + +D +MV + L EF+ ESCG CTPCR+G W+ +IL + Sbjct: 303 DSVAAKKSMLGTASIIVMDDSTDMVKVANRLMEFYQNESCGKCTPCREGTRWTKQILTRI 362 Query: 372 ERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFS 428 G G GD++T+E++C+ + +FC APGA P+ SAI+ FR EFE+ I + Sbjct: 363 LAGRGTVGDLKTIERICQQMEMD-SFCPLAPGAALPIVSAIREFRGEFESYIMRNIH 418 >UniRef50_Q0AYU9 NADH dehydrogenase (Quinone) n=4 Tax=Bacteria RepID=Q0AYU9_SYNWW Length = 408 Score = 440 bits (1131), Expect = e-122, Method: Composition-based stats. Identities = 162/418 (38%), Positives = 239/418 (57%), Gaps = 13/418 (3%) Query: 8 PETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGF 67 E + D P ++Y G++G KA G++ +++ +VK +GL+GRGGAGF Sbjct: 2 AEEIRILLAHADQIDPAQAEDYIKVGGFKGLEKA-RGMTSKDLIEEVKKSGLRGRGGAGF 60 Query: 68 STGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYR 127 + G+KWS +P E ++Y++CN DE EPGTYKDR++ E+ L+EGM I A+ A + Sbjct: 61 NAGMKWSFVPPAE---VKYVVCNLDEGEPGTYKDRIICEKNAQALIEGMAICGVAINAKQ 117 Query: 128 GYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALI 187 GYI+ RGEY LR+AI A + G LG+ F++ V GAG Y+CGEETALI Sbjct: 118 GYIYCRGEYPFVVDLLRKAIQSAKDVGALGE--------FDIEVRMGAGAYVCGEETALI 169 Query: 188 NSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGT 247 S+EG R PR KPPFP +G WG PT VNNVET +P IL NG +W+ +I K GT Sbjct: 170 ESIEGHRGEPRFKPPFPGVAGLWGVPTVVNNVETFACLPYILTNGADWFASIGAPKYPGT 229 Query: 248 KLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDL 307 K++ +G V NP +E+P +++ GG+++G KFKA Q GG F+ E +L+ Sbjct: 230 KVLTLTGDVNNPTYFEVPTNYILSDVIYKLGGGIKNGRKFKAVQVGGTSGAFIPEQNLNT 289 Query: 308 PMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKI 367 ++F+S+ G+ LG+ + +D ++V +V + +FF ESCG C PCR+G +I Sbjct: 290 SIDFDSMSAIGAALGSGAVLVMDETRDIVDIVTRISKFFEHESCGKCNPCREGTFRCREI 349 Query: 368 LRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 + + G DI+ L L R + C A P+ S I++F E+ + Q Sbjct: 350 MEKINSGRATEADIDNLLLLARVMKRAA-LCGLGQAAPVPITSTIEHFGHEYRRKLLQ 406 >UniRef50_Q2S5I8 Respiratory-chain NADH dehydrogenase 51 Kd subunit family n=4 Tax=Bacteroidetes/Chlorobi group RepID=Q2S5I8_SALRD Length = 464 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 187/434 (43%), Positives = 262/434 (60%), Gaps = 10/434 (2%) Query: 7 TPETHPLTWR------LRDDKQPVWLDEYRSKNGYEGARKALTG--LSPDEIVNQVKDAG 58 TP++ WR L + L Y GY+ R+ L P ++ ++VK +G Sbjct: 17 TPQSPAGDWRSYERMLLPPIQDLHKLGVYEEHGGYDRLRRVLEDDAFEPSDVTDEVKASG 76 Query: 59 LKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLI 118 L GRGGAGF TG+KW+ MP+ + R++ NADE EPGT+KDR +ME PHL++EG+L+ Sbjct: 77 LTGRGGAGFPTGIKWTFMPEPD-ERPRFIGVNADESEPGTFKDRQVMEYNPHLMLEGILL 135 Query: 119 SAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRY 178 + +AL Y+++RGEY + V+L+ + A EAG +G+NIMG+ F ++ +H GAG Y Sbjct: 136 AGYALHIDTAYVYIRGEYTDWIVHLKEQLENAYEAGYVGENIMGSDFTMDIVLHKGAGAY 195 Query: 179 ICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQN 238 ICGEET+L+ SLEG+R PR KPPFPA SG +G PT +NN ETL +VP I+ G E Y N Sbjct: 196 ICGEETSLMESLEGKRGYPRYKPPFPAQSGIFGSPTTINNAETLAHVPLIVEQGGEAYSN 255 Query: 239 ISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTD 298 I G L G SG VKNPG++E P G +++ D GGM KA PGG+ Sbjct: 256 IGAGDMPGPALYGMSGHVKNPGVYEFPTGMLLTDMIYDVCGGMARDKDLKAVVPGGSSVP 315 Query: 299 FLTEAHLD-LPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPC 357 + +D + M ES+G+ GSR GT + +D E +MVS +R + F+ E+CG CTPC Sbjct: 316 PVPADQIDGISMNDESLGEVGSRTGTFCPLVLDEETDMVSFLRRVAHFYQDETCGQCTPC 375 Query: 358 RDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFRE 417 R+G W KIL ++ GEG+ DI+ L +LC + G+T CA A GAV P+++ +K FRE Sbjct: 376 REGTSWLEKILARIDEGEGRMRDIDLLLELCDNMDGGRTICAFADGAVGPVRATVKRFRE 435 Query: 418 EFEAGIKQPFSNTH 431 EF A + Sbjct: 436 EFAAKCQASVHPVS 449 >UniRef50_D0LZ02 NADH-quinone oxidoreductase, F subunit n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LZ02_HALO1 Length = 445 Score = 437 bits (1125), Expect = e-121, Method: Composition-based stats. Identities = 177/438 (40%), Positives = 249/438 (56%), Gaps = 28/438 (6%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 + + + + Y + GY A++AL G++ ++I+ +VK + L+GRGGAGF TG+K Sbjct: 9 VVTQHFGKDEARTIAGYETLGGYAVAKRAL-GMAREQILAEVKASNLRGRGGAGFPTGVK 67 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 W +P +L+CNADE EPGT KDR L+ PH L+EGM++SA AL A YI++ Sbjct: 68 WGFVPA--GSKDVHLVCNADESEPGTCKDRELLFWDPHRLIEGMIVSAHALGAVHNYIYI 125 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 RGE + + L+ A+ EA E G LG NI GTG L VH GAG YICGEETAL+NSLEG Sbjct: 126 RGEMMREVLVLQDAVREAYERGYLGDNIFGTGKACHLTVHRGAGAYICGEETALLNSLEG 185 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISK--SKDAGTKLM 250 R PR KPPFPA G +G PT VNNVETL NVP I+ G W+ + + GT+++ Sbjct: 186 LRGQPRLKPPFPAVKGLFGNPTVVNNVETLMNVPTIIDKGGAWFAALGPEGGRSGGTRIV 245 Query: 251 GFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPME 310 SG V+ PG++ELP T +++++ GG+ G K KA PGG+ LT LD+P+E Sbjct: 246 CVSGHVEKPGVYELPMTITFNQLIDEVCGGVWKGRKVKAVIPGGSSMPPLTAEELDVPIE 305 Query: 311 FESI----------------------GKAGSRLGTALAMAVDHEINMVSLVRNLEEFFAR 348 F+++ + G+ + +D ++V + +F+A Sbjct: 306 FDALMTDERIRPVEVLRGQQFDMGGGRALRTMAGSGGIVVMDDHTDVVKACWRIMKFYAH 365 Query: 349 ESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPL 408 ESCG CTPCR+G W +I R + G G+PGDI+ L Q+ + G + CA A P+ Sbjct: 366 ESCGQCTPCREGTGWLEQICRRVAHGGGKPGDIDLLAQISHGI-AGNSICALGEAAAWPM 424 Query: 409 QSAIKYFREEFEAGIKQP 426 I FR+EFEA Sbjct: 425 MGFITKFRDEFEAKCASG 442 >UniRef50_Q20Z43 NADH dehydrogenase (Quinone) n=2 Tax=Rhodopseudomonas palustris RepID=Q20Z43_RHOPB Length = 428 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 215/426 (50%), Positives = 276/426 (64%), Gaps = 6/426 (1%) Query: 10 THPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFST 69 PLT R + ++P E++ GY+ R AL SPD +V V+D+GL+GRGGAGF T Sbjct: 3 ETPLTGRAQPGREPHRFAEWQRLGGYDALRGALQRHSPDALVTIVEDSGLRGRGGAGFLT 62 Query: 70 GLKWSLMPKDE---SMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAY 126 G KW LM K RYL N DEMEPG++KDRLLME LPH L+EG +++A+A+ A Sbjct: 63 GTKWRLMRKAAEAAGDGPRYLCVNGDEMEPGSFKDRLLMEALPHQLIEGAMLAAYAIGAT 122 Query: 127 RGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETAL 186 I +R Y AAV L RAI EA AGLLG+NI+G+GF ++ +HT AGRYI GEETAL Sbjct: 123 EVIILVRDAYRAAAVALTRAITEAESAGLLGRNILGSGFGLKMRLHTSAGRYIVGEETAL 182 Query: 187 INSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAG 246 I ++EG R PR +PP+PA SG WG+PT VNNVETL VP I+ NG EW+Q +S++ + G Sbjct: 183 IAAIEGERPVPRHRPPYPAQSGLWGRPTTVNNVETLSAVPHIVQNGAEWFQGLSRTAEGG 242 Query: 247 TKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLD 306 TKL G SGRV P L E P GT A E++E AGG+RDG K A+QPGG T FL EA LD Sbjct: 243 TKLYGISGRVARPQLIEAPMGTPAGELIE-MAGGIRDGRKLLAFQPGGGATAFLQEAELD 301 Query: 307 LPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVK 366 +PM+F + KAGS LGT + +D + V+ + F+ARESCG CTPCRDGLPW K Sbjct: 302 VPMDFAHVKKAGSSLGTGAVIVLDDQSCPVAAIGRHARFYARESCGLCTPCRDGLPWVAK 361 Query: 367 ILRALERGEGQPGDIETLEQLCRFLGP-GKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 +L ALE G G+P DI+ L GP G++FC GA+ P++S ++ F + F A + Sbjct: 362 LLDALEAGHGKPEDIDLLHMHVELAGPSGRSFCDLMAGAMTPVKSGLERFGDIFAAHL-N 420 Query: 426 PFSNTH 431 Sbjct: 421 GHCPVR 426 >UniRef50_D1N816 NADH dehydrogenase (Quinone) n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N816_9BACT Length = 573 Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 160/423 (37%), Positives = 236/423 (55%), Gaps = 9/423 (2%) Query: 14 TWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKW 73 L P ++Y + +GY+G KAL ++ ++V++VK +GL+GRGG GF TG KW Sbjct: 101 VLALAGRIDPTSFEDYVAHDGYKGLEKALA-MTSQQVVDEVKLSGLRGRGGGGFPTGNKW 159 Query: 74 SLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLR 133 + ++ + L+CNADE +PG + DR LME PH ++EGMLI+A+A A + +I+ R Sbjct: 160 GFLAAKQAD-EKILICNADEGDPGAFMDRSLMESAPHQVLEGMLIAAYATGATKLFIYCR 218 Query: 134 GEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGR 193 EY A +L+ AIA+ E L N G + E+ + GAG ++CGEETALI SLEG+ Sbjct: 219 AEYPMAIKHLKIAIAQIYEHKLNVVN----GRELEIIIKEGAGAFVCGEETALIASLEGQ 274 Query: 194 RANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFS 253 R PR +PPFP G G P+ +NNVET NVP IL G + ++ GTKL + Sbjct: 275 RGTPRFRPPFPTDKGWMGHPSMINNVETFGNVPLILREGAAAFASVGTEGSKGTKLFALA 334 Query: 254 GRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFES 313 G +K+PGL E+P GTT REI+ D G D K KA Q GG + D P++++S Sbjct: 335 GDLKHPGLVEVPMGTTLREIVFDIGG--ADPEKVKAVQTGGPSGGCIPVELFDTPVDYDS 392 Query: 314 IGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALER 373 + K G+ +G+ + + + MV R +F RESCG CT CR G + L + Sbjct: 393 LRKLGAIMGSGGMIVIGKDRCMVETARYFLDFTHRESCGKCTFCRVGTTRMYETLERIVA 452 Query: 374 GEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLI 433 G+G D+ LE L + G + C A P+ + ++Y+R E+EA ++ + Sbjct: 453 GKGSMEDLALLEDLGPKIRMG-SLCGLGQTAPNPVLATLRYYRHEYEAHVRDRQCDALQC 511 Query: 434 NGI 436 N + Sbjct: 512 NAL 514 >UniRef50_D2BG77 [Fe] hydrogenase, HymB subunit n=6 Tax=cellular organisms RepID=D2BG77_DEHSV Length = 417 Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 169/418 (40%), Positives = 258/418 (61%), Gaps = 8/418 (1%) Query: 9 ETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFS 68 + + R + +D Y + GY+ +KAL+ ++P+E++ +VK + L GRGGA F Sbjct: 2 KDVKIITRHLNTANSADIDVYLADGGYQALKKALS-MTPEEVIAEVKRSKLVGRGGAAFP 60 Query: 69 TGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRG 128 TGLKW L K+++ +Y++CNA E EPGT+KDRL+++ PH+++EG +I+A+A+ +G Sbjct: 61 TGLKWELTRKEKANP-KYIVCNASEGEPGTFKDRLILKNDPHMVLEGFIIAAYAVGTSQG 119 Query: 129 YIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALIN 188 +I R Y E ++AI +ATE G LG+NIMG+ F ++ + AG YICGEETAL Sbjct: 120 FIHAREVYTEEIELFQKAIDQATERGFLGQNIMGSNFSLDIQFYKSAGAYICGEETALFE 179 Query: 189 SLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTK 248 SLEG R P ++PP+P G KPT VNNVETLCNVPAI+ NG +W+ +I GTK Sbjct: 180 SLEGHRGIPAARPPYPVQVGLMDKPTTVNNVETLCNVPAIINNGADWFASIGHPDYPGTK 239 Query: 249 LMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLP 308 L SG VK PG++E+P GT +++LE GG+ KFKA PGG + LTE D+ Sbjct: 240 LFCLSGNVKEPGVFEMPLGTNLKDLLE-AGGGV--DGKFKAVLPGGISSSLLTET--DIS 294 Query: 309 MEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKIL 368 ++F+++ KAG+ LG+ + ++ + +MV++ N+ FF E CG C+ CR+G + +IL Sbjct: 295 LDFKTLAKAGTMLGSGAVIVINSDTSMVNVASNVAHFFDEEGCGKCSICREGTRRAAEIL 354 Query: 369 RALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQP 426 RG+G ++E L +L + + C A+ SAI+ F+ EF A +++ Sbjct: 355 SRFSRGQGNRNELEWLLELHEVMKDTAS-CGLGQVALNVAASAIRNFKGEFLAQVRKE 411 >UniRef50_B2V6E9 NADH dehydrogenase (Quinone) n=18 Tax=Bacteria RepID=B2V6E9_SULSY Length = 523 Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats. Identities = 167/410 (40%), Positives = 240/410 (58%), Gaps = 3/410 (0%) Query: 10 THPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFST 69 +T+ P+ + +Y+S G+ G +KA++ + +EI+ ++K +GL+GRGGAGF T Sbjct: 105 QTRITFERVGLVDPLSIKDYQSNGGFLGLKKAIS-MKSEEIIEEIKKSGLRGRGGAGFPT 163 Query: 70 GLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGY 129 G+KW + K S +Y++CNADE + GT+ DR++ME P LL+EGM+I+ A+ A GY Sbjct: 164 GIKWETVFKTGSDK-KYVVCNADEGDSGTFSDRMIMESDPFLLIEGMVIAGLAVGADEGY 222 Query: 130 IFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINS 189 I+LR EY A L +AI A + LGKNI+G+G DF+L V+ GAG Y+CGEETAL+ S Sbjct: 223 IYLRSEYPLAKEVLTKAIDLAYKNRYLGKNILGSGKDFDLEVYVGAGSYVCGEETALLES 282 Query: 190 LEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKL 249 LEG+R R KPP+PA +G W KPT +NNV TL VP I+ G + Y N K GT Sbjct: 283 LEGKRGVVRPKPPYPAINGLWNKPTLINNVNTLATVPWIIREGGDKYFNYGVGKSRGTIA 342 Query: 250 MGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPM 309 + SG VK+PGL E+PFG + ++I+ + GG + G K KA GG ++ E+ D+ + Sbjct: 343 IQLSGNVKHPGLVEVPFGISIKDIVYGFGGGTKTGKKVKAALIGGPFGIYIPESMFDISI 402 Query: 310 EFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILR 369 ++ES+ K G +G + D E ++ L R EF ESCG C PCR G ++IL Sbjct: 403 DYESLSKIGGTIGHGSIVVFDEEADLKYLARFAMEFCFIESCGKCAPCRIGSIRGLEILD 462 Query: 370 ALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEF 419 L I L + + C A +P+ S K+F EEF Sbjct: 463 KLLNQGRDERLISMFVDLSEVM-INTSLCGLGGMAPKPILSLFKHFPEEF 511 >UniRef50_A1VM65 NADH-quinone oxidoreductase, F subunit n=162 Tax=Proteobacteria RepID=A1VM65_POLNA Length = 473 Score = 433 bits (1114), Expect = e-120, Method: Composition-based stats. Identities = 180/423 (42%), Positives = 254/423 (60%), Gaps = 9/423 (2%) Query: 20 DKQPVWLDEYRSKNGYEGARKAL-----TGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWS 74 D L +Y S+ GY+ RK L GL+PD+++ +VK GL+GRGGAGF TGLKWS Sbjct: 43 DGSNWHLGDYESRGGYQALRKILGQDGGAGLTPDQVIAEVKAGGLRGRGGAGFPTGLKWS 102 Query: 75 LMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRG 134 MP+ +YL+CN+DE EPGT KDR +M+ PH ++EGM I+A+A+ GY ++ G Sbjct: 103 FMPRQF-PGQKYLVCNSDEGEPGTCKDRDIMQYNPHSVIEGMAIAAYAMGISVGYNYIHG 161 Query: 135 EYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRR 194 E A+ EA AGLLG NI+G+ F+F+L G G YICGEET L+ SLEG++ Sbjct: 162 EIFATYQRFEAALDEARAAGLLGDNILGSNFNFQLHAAHGFGAYICGEETGLLESLEGKK 221 Query: 195 ANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSG 254 PR KPPFPA+ G +GKPT +NN ET VP I+ NG Y K + GTK+ SG Sbjct: 222 GQPRFKPPFPASFGLYGKPTTINNTETFAAVPWIIRNGGAAYLECGKPNNGGTKIYSVSG 281 Query: 255 RVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHL-DLPMEFES 313 V+ PG +E+P GT ++LE AGG+R G KA PGG+ + L + + + M+++S Sbjct: 282 DVELPGNYEVPMGTPFAKLLE-LAGGVRKGRTLKAVIPGGSSSPVLPASSMMECTMDYDS 340 Query: 314 IGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALER 373 I KAGS LG+ + +D MV ++ L F+ ESCG CTPCR+G W +++ + Sbjct: 341 IAKAGSMLGSGAVIVMDDSRCMVESLKRLSYFYMHESCGQCTPCREGTGWLWRVVDRIHN 400 Query: 374 GEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLI 433 G G+ D++ L + + G+T CA A P+++ IK++R EFEA I + S Sbjct: 401 GLGRQSDLDLLNSVADNI-QGRTICALGDAAAMPVRAMIKHYRHEFEAMIPKNTSQVAAS 459 Query: 434 NGI 436 G+ Sbjct: 460 KGV 462 >UniRef50_C9RJK0 NADH dehydrogenase (Quinone) n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJK0_FIBSS Length = 435 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 173/426 (40%), Positives = 249/426 (58%), Gaps = 7/426 (1%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 + + ++ Y+ GY + L +S E+++ V+ + L+GRGGAGF TG+K Sbjct: 7 VCTQNFGKG-AQDIEVYKKLGGYSNISERLFNMSQFELIDYVQRSNLRGRGGAGFPTGMK 65 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 WS +P+ + Y++ NADE E GT+KD LM + PH L+EG++I+A+AL + YI+ Sbjct: 66 WSFVPRGTGKPV-YIVVNADEGEGGTFKDHFLMLEDPHRLIEGLIIAAWALGSRAAYIYC 124 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 RGE++ L +A+ +A AG LG+NI GT F F++FVH GAG YICGEETALINSLEG Sbjct: 125 RGEFLPCIEALNKALNQAYAAGYLGENICGTKFSFDIFVHRGAGAYICGEETALINSLEG 184 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGF 252 ++ PR KPPFPA GAW PTCVNNVET+ ++P IL++ Y + + GTK+ Sbjct: 185 QKGQPRLKPPFPAVCGAWKSPTCVNNVETIMSLPWILSHDPSDYAKMGTPRAGGTKVFCI 244 Query: 253 SGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLP-MEF 311 SG VKNPG++E P GT ++ DYAGG+ G K KA PGG+ LT + M++ Sbjct: 245 SGDVKNPGVYEAPLGTPMMTMINDYAGGVVGG-KLKAVLPGGSSCAPLTAEEAAVATMDY 303 Query: 312 ESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRAL 371 E + + G+ + ++ NMV L+ L F++ ESCG CTPCR+G +IL + Sbjct: 304 ECLASMKTMFGSGAMIVINDTHNMVDLLNCLGNFYSHESCGQCTPCREGTGLLHRILNQM 363 Query: 372 ERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTH 431 G G GD+E ++ L G G T C + P+ S FR +F+ I + + H Sbjct: 364 VAGNGHDGDVELMQSLSSGFG-GVTICPLSISLGGPVSSYTAKFRADFDEYIAK--NPEH 420 Query: 432 LINGIQ 437 IQ Sbjct: 421 AKPRIQ 426 >UniRef50_B6JB78 NADH dehydrogenase i chain f n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JB78_OLICO Length = 620 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 169/418 (40%), Positives = 238/418 (56%), Gaps = 8/418 (1%) Query: 1 MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLK 60 + + + + + + P +D+Y + +GY G R+A + P +++ +VKD+ L Sbjct: 197 IMAVPQAGQDGLMLLKRIGKVDPESIDDYLATDGYAGLRRAF-EMEPAQVITEVKDSRLM 255 Query: 61 GRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISA 120 GRGGA F G+KW K + RYL+CNADE EPGT+KDR ++E P L+E M I+ Sbjct: 256 GRGGAAFPAGIKWESTAKQPATP-RYLVCNADESEPGTFKDRSILEGDPFALIESMTIAG 314 Query: 121 FALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYIC 180 +A+ A RGYI+LRGEY A L AI +A E G LG+NI G G+ FEL + GAG YIC Sbjct: 315 YAIGAERGYIYLRGEYPRAYRMLSNAIEKARERGFLGENIQGKGWSFELEIRRGAGAYIC 374 Query: 181 GEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNIS 240 GEETA+ NS+EG R PR+KPPFP +G +GKPT VNNVETLCNVP I+ G Y I Sbjct: 375 GEETAIFNSIEGYRGEPRTKPPFPFEAGLFGKPTVVNNVETLCNVPLIMQLGGAEYAKIG 434 Query: 241 KSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFL 300 G KL SG + PG++E+PFG T +ILE AGG+ G K +A GGA F+ Sbjct: 435 TEGSTGPKLFCVSGNLVRPGVYEVPFGATLGDILE-LAGGVPQGRKLQAVLLGGAAGVFV 493 Query: 301 TEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDG 360 LD+P+ FE + A + LG+ + +A D +++ ++ + FF ESCG C PCR G Sbjct: 494 RADELDIPLTFEGVRAAKATLGSGVVLAFDDTVDLSGILLRIASFFRDESCGQCVPCRVG 553 Query: 361 LPW----SVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKY 414 ++I+ + + DI L + + + C A ++SAI Sbjct: 554 TVRQEEALLRIMHNGHDAKAKGNDIHILRDVGLVMKDA-SICGLGQAAWNAVESAIDR 610 >UniRef50_C6SUV8 MIP04331p (Fragment) n=3 Tax=Drosophila melanogaster RepID=C6SUV8_DROME Length = 704 Score = 426 bits (1096), Expect = e-118, Method: Composition-based stats. Identities = 170/418 (40%), Positives = 240/418 (57%), Gaps = 12/418 (2%) Query: 20 DKQPVWLDEYRSKN---------GYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTG 70 D ++ + Y + G K + IVN++K +GL+GRGGAGF +G Sbjct: 262 DADRIFTNLYGRHDWRLKAAMKRGDWYKTKEIIAKGDKWIVNEIKTSGLRGRGGAGFPSG 321 Query: 71 LKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYI 130 LKWS M K ++L+ NADE EPGT KDR +M PH LVEG LI+ A+ A G+I Sbjct: 322 LKWSFMHKPPDGRPKFLVVNADEGEPGTCKDREIMRHDPHKLVEGCLIAGRAMGANTGFI 381 Query: 131 FLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSL 190 ++RGE+ A NL+ AI EA +AG LGKN G+GFDF+L+V GAG YICGEET+LI SL Sbjct: 382 YIRGEFYNEACNLQYAIIEAYKAGYLGKNACGSGFDFDLYVQRGAGAYICGEETSLIESL 441 Query: 191 EGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLM 250 EG+ PR+KPPFPA G +G P+ V NVET+ P I G W+ + +++++GTKL Sbjct: 442 EGKAGKPRNKPPFPADIGVFGCPSTVTNVETVAVSPTICRRGGNWFASFGRTRNSGTKLF 501 Query: 251 GFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLK-FKAWQPGGAGTDFLTEAHLDLPM 309 SG V NP E RE++E +AGG+ G A PGG+ T +T+ H + Sbjct: 502 NISGHVCNPCTVEEEMSMPTRELIERHAGGVIGGWDNLLAIIPGGSSTPCITKEHASSAI 561 Query: 310 -EFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKIL 368 +++ + S +GT + ++ + +++ + L F+ ESCG CTPCR+GL W I+ Sbjct: 562 HDYDGLMAVRSSMGTGALIVMNKDTDIIKAIARLSAFYKHESCGQCTPCREGLHWVNMIM 621 Query: 369 RALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQP 426 G+ Q +I+ L +L + + G T CA A GA P Q I+ FR E IK+ Sbjct: 622 HRFVTGQAQIAEIDMLFELTKQI-EGHTICALADGAAWPPQGLIRNFRPVIEERIKKR 678 >UniRef50_C1YSE4 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit n=4 Tax=Actinomycetales RepID=C1YSE4_NOCDA Length = 656 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 168/413 (40%), Positives = 234/413 (56%), Gaps = 4/413 (0%) Query: 2 KNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKG 61 + + R P+ LD+YR+ GY R+AL L P ++ +V D+GL G Sbjct: 222 AAVPDAGSPDHVLLRRIGTVDPLSLDDYRAAGGYAALRRAL-RLGPAGVIREVSDSGLVG 280 Query: 62 RGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAF 121 RGGA F TG KW + YL+CNADE EPGT+KDR+LME P +VE M I+ + Sbjct: 281 RGGAAFPTGRKWQATAQQPDGP-HYLVCNADESEPGTFKDRVLMEGDPFSVVEAMTIAGY 339 Query: 122 ALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICG 181 A+ A GY+++RGEY A +L A+A A GLLG +I+G+GF F++ + GAG YICG Sbjct: 340 AVGARTGYLYIRGEYPRALRHLENAVALARGRGLLGPDILGSGFAFDIEIRRGAGAYICG 399 Query: 182 EETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISK 241 EETA+ S+EG+R PRSKPPFP G +GKPT VNNVETL NV +L G Y + Sbjct: 400 EETAIFGSIEGQRGEPRSKPPFPVEKGLFGKPTAVNNVETLVNVLPVLLMGGPAYAAVGT 459 Query: 242 SKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLT 301 + G KL SG V+ PGL+ELPFG T R+++E AGGM +G +A GGA F+ Sbjct: 460 GQSTGPKLFCLSGGVRRPGLYELPFGATLRDLIE-AAGGMPEGRTIQAVLLGGAAGTFVR 518 Query: 302 EAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGL 361 LD+P+ FE AG+ LG+ + + +D ++V+ + + FF ESCG C PCR G Sbjct: 519 GDELDIPLTFEGARAAGTSLGSGVVLVLDDTADLVATLVRVAAFFRDESCGQCVPCRVGT 578 Query: 362 PWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKY 414 + L + G ++ L ++ + + C A ++SAI Sbjct: 579 VRQEESLLRIRAGGDAAAEVPLLREVGLAMRDA-SICGLGQTAWNAVESAIDR 630 >UniRef50_C7M2U2 NADH dehydrogenase (Quinone) n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2U2_ACIFD Length = 432 Score = 420 bits (1079), Expect = e-116, Method: Composition-based stats. Identities = 169/429 (39%), Positives = 247/429 (57%), Gaps = 14/429 (3%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 + + L+ + + +G G R+AL L+P+++ +V +A L GRGGAGF G K Sbjct: 6 IVGARLGYEDSYTLERFLATDGDAGLRRALLELTPEQVHAEVLEANLLGRGGAGFEAGRK 65 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 WS++ K RYL+ N DE EP T+KD LL+E+ PH LVEG I+A+A+ A +I+L Sbjct: 66 WSMLRKAPR---RYLVVNGDESEPATFKDHLLVERDPHQLVEGATIAAYAIGASVAFIYL 122 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 RGE+ +++AI +A G LG+NI G+GF ++ + GAG YICGEETAL+ SLEG Sbjct: 123 RGEFALGLERVQQAINDAYARGALGRNIFGSGFSLDIVLQPGAGAYICGEETALLESLEG 182 Query: 193 RRANPRSKPP-FPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMG 251 +R PR KPP FPA G +G PT VNNVET+ N+P I+ +G ++ + + GT++ Sbjct: 183 KRGFPRIKPPYFPAVIGLYGAPTIVNNVETVSNLPWIVRHGGAAFRALGAGRSTGTRIFA 242 Query: 252 FSGRVKNPGLWELPF-GTTAREIL--EDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLP 308 SG V+ PG +E+ T RE++ + Y G+ + +A+ PGG + +L HLDLP Sbjct: 243 LSGSVRRPGAFEVEMTSVTFRELIYGDAYGQGLEPDRELRAFIPGGVSSPWLFPEHLDLP 302 Query: 309 MEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKIL 368 + + + KAGS LG+ + +D V + FFARESCG CTPCR+G W ++L Sbjct: 303 LGQDEVAKAGSMLGSGSIIVMDDGDCPVRAAWRIARFFARESCGQCTPCREGGTWIEQVL 362 Query: 369 RALERGEGQPGDIETLEQLCRFLGPG-------KTFCAHAPGAVEPLQSAIKYFREEFEA 421 R LE G G+ D++ L C + PG T C P + +AI+ FR+ F Sbjct: 363 RRLELGYGREEDLDLLLDACDNISPGVTWPPAQTTICVLGPSIPPSVVAAIRRFRDVFLT 422 Query: 422 GIKQPFSNT 430 IK+ Sbjct: 423 HIKEERCPY 431 >UniRef50_A3EW61 NADH dehydrogenase (Quinone) n=3 Tax=Bacteria RepID=A3EW61_9BACT Length = 453 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 136/406 (33%), Positives = 221/406 (54%), Gaps = 3/406 (0%) Query: 26 LDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIR 85 L Y GYEG R+ L LSP E + ++K+AGL+GRGG+GF T +KW + + + Sbjct: 32 LSTYLKDGGYEGLRRVLGNLSPSEAIEELKEAGLRGRGGSGFPTAIKWEKV-AHHRIREK 90 Query: 86 YLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRR 145 Y++ N E EPG++KD L+E PH ++EGM+I++FA++A + +F++ + L++ Sbjct: 91 YVVANGSEGEPGSHKDHFLIETNPHQILEGMIIASFAVRARKAILFVKDSFPRGIDALKK 150 Query: 146 AIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGR-RANPRSKPPFP 204 A EA E G LG I+G+ +L + G YI GEETAL+ +LEGR P +P Sbjct: 151 ARDEAREEGFLGDRILGSELSLDLEIFVGPSAYIAGEETALLEALEGRLPKPRPKPPGYP 210 Query: 205 ATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWEL 264 G + PT VNNVET +V I +G W++ K GT + +G VK P + EL Sbjct: 211 TDRGLYNCPTVVNNVETYAHVSHIFRHGAHWFKRRGLPKSPGTMVFSVTGSVKRPIVVEL 270 Query: 265 PFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTA 324 P GT+ R ++E+YAGG DG + +++ PGG L LD P++++++ GS +G+ Sbjct: 271 PLGTSLRTLVEEYAGGAPDGERIESFYPGGPSFGVLPAKDLDTPLDYDALRALGSGIGSG 330 Query: 325 LAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETL 384 + + + V+ R F+ SCG C PCR G +IL E G+ +++ + Sbjct: 331 GVIVLSDKDCPVATARQFAAFYETGSCGQCPPCRIGTENLHEILELFENGKASRENVQRI 390 Query: 385 EQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNT 430 ++ + G+ C + ++S +++F EEF++ + Sbjct: 391 LRISDMIK-GRGNCGLITASAYSVESLVRHFPEEFQSHLDDGGCRR 435 >UniRef50_C1AB34 NADH-quinone oxidoreductase chain F n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AB34_GEMAT Length = 439 Score = 418 bits (1074), Expect = e-115, Method: Composition-based stats. Identities = 151/407 (37%), Positives = 239/407 (58%), Gaps = 3/407 (0%) Query: 23 PVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESM 82 L Y+++ GY+ +KALT + P ++ +V +GL G GGA F G KW ++ + Sbjct: 16 SHSLAAYKARGGYQSLQKALTSMQPTDVTKEVAASGLLGHGGAAFPAGRKWGVIKLTDGE 75 Query: 83 NIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVN 142 Y+ NADE EPGT+KDR L+E +PHL +EG++++++A+ +I++RGE+ Sbjct: 76 P-HYVCMNADEGEPGTFKDRWLLEHVPHLCIEGLILASYAIMGRHAFIYIRGEFDLPFRR 134 Query: 143 LRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPP 202 LR AI EA AGLLG+NI+GTG+ ++ ++ GAG Y+CGE +A++ SLEG++ PR++PP Sbjct: 135 LRDAIEEAYAAGLLGENILGTGYSLDIVLYRGAGSYVCGEASAMLASLEGKKGWPRNRPP 194 Query: 203 FPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLW 262 G + +PT VNNVETL N+PAI+ G E ++ + K GT+++ SG + PG++ Sbjct: 195 RLTVKGLYQRPTVVNNVETLANIPAIIGEGGETFRKVGLPKSPGTQMISISGHLVRPGVY 254 Query: 263 ELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLD-LPMEFESIGKAGSRL 321 E+ +G + + + + GG+ G K PGG T L L ++ S AGS++ Sbjct: 255 EIEYGYSWEKFIYEDCGGILGGRALKCVIPGGVSTKILDANELKGRTLDHNSALAAGSQI 314 Query: 322 GTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDI 381 G+ + + MV + R ++ F+ ESCG CTPCR+G+ W +IL + RGEG+P DI Sbjct: 315 GSGGMIVIAEGTCMVRVARVIQRFYHHESCGQCTPCREGMGWMERILDRIVRGEGRPEDI 374 Query: 382 ETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFS 428 + L + G T C+ A + + ++R+EFE I S Sbjct: 375 DRLYHISTA-NDGTTICSLGDSAGYACSAILDHYRDEFEHFITHGRS 420 >UniRef50_A9EX79 NADH dehydrogenase (Ubiquinone) n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9EX79_SORC5 Length = 450 Score = 418 bits (1074), Expect = e-115, Method: Composition-based stats. Identities = 175/443 (39%), Positives = 246/443 (55%), Gaps = 27/443 (6%) Query: 14 TWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKW 73 + D L Y GY+ A++AL G++ + +V ++K A ++GRGGAGF+ G+KW Sbjct: 8 LTKNYDTPDGHKLAVYEKGGGYQQAKRAL-GMTREALVEEMKAANIRGRGGAGFAMGVKW 66 Query: 74 SLMPKDESM-NIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 S MP YL+ NADE EPGT+KDR LME+ PH +VEG +I F + A+ YI++ Sbjct: 67 SFMPWPPKPERPHYLVINADEGEPGTFKDRTLMEKNPHAVVEGCIIGCFGIGAHAAYIYV 126 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 R E + L AI EA G LGK G + E++VHTGAG YICGEET+L+NSLEG Sbjct: 127 RDELHLSKARLWGAIEEARAKGYLGKRPFGIDYPVEVYVHTGAGAYICGEETSLLNSLEG 186 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWY---QNISKSKDAGTKL 249 +R PR KPPFPA GA+G PT VNN+ET+ VP L G E + ++ KD G +L Sbjct: 187 KRGEPRLKPPFPAQFGAFGMPTTVNNLETIAAVPTALELGGENFSKLSSLHHLKDGGCRL 246 Query: 250 MGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAH----- 304 G SG V NPG++E G T R+++ +Y GG++ G K PGG+ L Sbjct: 247 FGVSGHVNNPGIFEAAVGVTLRDLIYEYGGGVKHG-KLLGVIPGGSSCPILRADEVVNAP 305 Query: 305 --------------LDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARES 350 LD+P+ ++ G+ LGT A+ + + V + NL F+ ES Sbjct: 306 SDKSPLHPWHGQSVLDVPLGVDTFRALGTMLGTCCAIVLSDKACPVLAMHNLMRFYRHES 365 Query: 351 CGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQS 410 CG CTPCR+G W +IL + GEG +++ L ++ + G T CA G P Sbjct: 366 CGQCTPCREGSAWIHRILDRIVHGEGTIEELDRLHEIADNI-MGNTICAFGEGTAMPALG 424 Query: 411 AIKYFREEFEAGI-KQPFSNTHL 432 ++ FR+EFEA I + S+T + Sbjct: 425 FLRKFRKEFEAYIQTKGRSSTGV 447 >UniRef50_C4XMN9 NADH-quinone oxidoreductase chain F n=5 Tax=Deltaproteobacteria RepID=C4XMN9_DESMR Length = 454 Score = 417 bits (1071), Expect = e-115, Method: Composition-based stats. Identities = 185/421 (43%), Positives = 259/421 (61%), Gaps = 4/421 (0%) Query: 12 PLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGL 71 + ++ R +P +DEY + GYE R + +P E++ V DA L+GRGGAGF G Sbjct: 7 QVLFKNRHLGRPATIDEYLAGGGYEALRATIGQRTPAEVLQLVLDADLRGRGGAGFPAGR 66 Query: 72 KWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIF 131 KW +P + + RY++ N DEMEPGT+KDR+L+ PHL++EG+++ A+A+ A G F Sbjct: 67 KWQGIPA-DHVGTRYVVINTDEMEPGTFKDRILVNVDPHLVIEGIILCAYAVGACEGVFF 125 Query: 132 LRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLE 191 +R Y A + + A E G LGKNI+GT F F++ VH AGRYICGE +A I ++ Sbjct: 126 IRPSYEGDAKLIEQETQVARERGYLGKNILGTDFCFDVHVHRSAGRYICGEASAQIKAIS 185 Query: 192 GRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDA-GTKLM 250 G R NPR P + G W PT VNN+ETL N+P I+ NG W++++++S+ GTKL Sbjct: 186 GLRPNPRKGGPRTSVKGLWDCPTIVNNLETLANLPGIVRNGPAWFKSLARSESGSGTKLY 245 Query: 251 GFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPME 310 SG+V PG +ELP G T R+I+ +AGGM G FK PGGA T +L EA LDL M+ Sbjct: 246 SVSGQVARPGCYELPIGVTIRDIIFTHAGGMAPGKTFKTVIPGGASTPYLPEALLDLEMD 305 Query: 311 FESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRA 370 F+ + KAG R GTA M D + +V +L EFFARESCGWCTPCR+G+P+ ++LR Sbjct: 306 FDPMRKAGQRFGTASLMVFDQDTCLVGATLSLMEFFARESCGWCTPCREGIPYVRELLRR 365 Query: 371 LERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNT 430 +E GEG + L+++ L CA APGA EPL+ + +F +E +A I + Sbjct: 366 IEGGEGTEEHVGMLQEMLPVLDLAY--CAFAPGAAEPLRGLLTHFMDEVQAHITEKRCPF 423 Query: 431 H 431 Sbjct: 424 G 424 >UniRef50_Q9ZBV8 Putative respiratory chain oxidoreductase n=4 Tax=Streptomyces RepID=Q9ZBV8_STRCO Length = 646 Score = 410 bits (1055), Expect = e-113, Method: Composition-based stats. Identities = 174/415 (41%), Positives = 224/415 (53%), Gaps = 9/415 (2%) Query: 2 KNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKG 61 + + + P LD+YR+ GY R+A L P ++ +V DAGL G Sbjct: 234 AAVPQAGDPTLTLLHRIGTTDPTSLDDYRAHGGYTALRRAFA-LGPAAVIREVTDAGLVG 292 Query: 62 RGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAF 121 RGGA F TG KW YL+CNADE EPGT+KDR+LME P+ LVE M I+A+ Sbjct: 293 RGGAAFPTGRKWQATAAQPDHP-HYLVCNADESEPGTFKDRVLMEGDPYALVEAMTIAAY 351 Query: 122 ALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICG 181 A A+RGY++LRGEY A L AI +A GLLG +++G G+ F++ + GAG YICG Sbjct: 352 ATGAHRGYLYLRGEYPRALARLTHAIEQARTRGLLGDDVLGQGYAFDIEIRRGAGAYICG 411 Query: 182 EETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISK 241 EETAL NS+EGRR PRSKPPFP G +GKPT NNVETL NV IL G E Y I Sbjct: 412 EETALFNSIEGRRGEPRSKPPFPVEKGLFGKPTVENNVETLVNVLPILTMGAEAYAAIGT 471 Query: 242 SKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLT 301 G KL SG V PG++ELPFG T E+L +A GGA F+ Sbjct: 472 PTSTGPKLFCVSGTVARPGVYELPFGATLGELLALAGV----RDNLRAVLLGGAAGGFVR 527 Query: 302 EAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGL 361 LD+P+ FE +AG+ LG+ + MA D + + L+ + EFF ESCG C PCR G Sbjct: 528 PDELDIPLTFEGTREAGTTLGSGVVMAFDDTVPLPRLLLRIAEFFRDESCGQCVPCRVGT 587 Query: 362 PWSVKILRA--LERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKY 414 + L G DI L ++ R + + C A ++SAI Sbjct: 588 VRQEEALHRIADRTGAAAADDIALLREVGRAMRDA-SICGLGQTAWNAVESAIDR 641 >UniRef50_B5ICD1 Respiratory-chain NADH dehydrogenase 51 Kd subunit family n=2 Tax=Aciduliprofundum boonei T469 RepID=B5ICD1_9EURY Length = 404 Score = 409 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 165/400 (41%), Positives = 239/400 (59%), Gaps = 6/400 (1%) Query: 21 KQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDE 80 K +++Y ++ G++ RKAL DEI+ +V+ +GL GRGGA F TGLK + K++ Sbjct: 5 KDASNVEDYLAQGGFKALRKAL-EYGQDEIIREVEISGLLGRGGAAFPTGLKMKFVRKEK 63 Query: 81 SMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAA 140 S +Y++ NADE EPGT+KDR+LME+ P+ ++EGM+IS +A+ A +G+ ++R EY E A Sbjct: 64 STP-KYIVANADEGEPGTFKDRVLMERNPYQILEGMIISGYAIDAKKGFFYIRYEYKEIA 122 Query: 141 VNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSK 200 +++R I E G+LG NI G F F++ + GAG Y+CGEETAL+ S+EG+R PR K Sbjct: 123 KDIKRKIEELRRLGILGPNIYGPKFSFDIELVVGAGAYVCGEETALMESIEGKRGYPRIK 182 Query: 201 PPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPG 260 PP+PA G WGKPT +NNVETL N+P +++ G Y + K G KL SG VKNPG Sbjct: 183 PPYPAQYGLWGKPTLINNVETLANIPIVMSMGGANYSKLGKEGCTGPKLFSVSGFVKNPG 242 Query: 261 LWELPFGT-TAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGS 319 ++E G T E++E G +G GGA L E HLDLP+ F+ + G Sbjct: 243 VYEANLGDKTIGEMIELAGG--AEGKIKGIMLGGGAAGFILNEEHLDLPLCFKDAKERGL 300 Query: 320 RLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPG 379 LGT + + + + ++ N+ +FF ESCG C PCR G +I+ + RG+G+ Sbjct: 301 FLGTGNIIVFNESVGLWDVLLNISKFFEHESCGQCFPCRYGTKRMREIIEKIVRGDGRKE 360 Query: 380 DIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEF 419 DIE L R + + C A+ +SA+K F EE Sbjct: 361 DIEKLNATARAMKIA-SLCPLGASAMLAYESAMKNFHEEL 399 >UniRef50_Q2LQE7 NADH-quinone oxidoreductase chain F n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LQE7_SYNAS Length = 574 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 173/414 (41%), Positives = 237/414 (57%), Gaps = 15/414 (3%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 + + R K L + Y+ KA + P+EI+ +VK A L+GRGGAGF G+K Sbjct: 175 VLLKNRGVKDATALAVAKGNGAYQALAKA-GTMKPEEILEEVKKANLRGRGGAGFPAGVK 233 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 W +PKD + YL+CNADE EPGTYKDR +ME PHLL+EGM I+A A+ A + +I++ Sbjct: 234 WGFIPKDTDKPV-YLICNADEGEPGTYKDRQIMEYDPHLLIEGMAIAARAIGARQAFIYI 292 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 RGE+ A L +AI EA G L + ++ VH GAG Y+CGEETALI S+EG Sbjct: 293 RGEFAWIADILEKAIGEAKADGQLSE--------LDIIVHRGAGAYVCGEETALIESIEG 344 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGF 252 +R PR +PPFPA G +G PT VNNVETL +VP I+ G E ++ + G KL G Sbjct: 345 KRGQPRIRPPFPAVEGLYGCPTIVNNVETLASVPFIIEKGAEAFKQWGFENNYGFKLFGI 404 Query: 253 SGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHL-DLPMEF 311 SG V PG++E P G + E++E G K KA GG L L DL M++ Sbjct: 405 SGCVNKPGVYEYPLGVSFNELMEAAGGVK---GKLKAAIVGGLSVAILKAEELQDLTMDY 461 Query: 312 ESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRAL 371 +S K G+ LG+ M + + ++ L +F+A ESCG C PCR+G VKIL L Sbjct: 462 DSCAKHGTGLGSGGIMVISEDFSIPELALRTIKFYAHESCGKCVPCREGSYTLVKILHKL 521 Query: 372 ERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 G+G+ DIE + +C + G T C P+Q+ ++ FR EF+A IK+ Sbjct: 522 LSGQGEAADIEKILGICNTVR-GLTLCPTGEAFAVPIQAMVEKFRSEFDALIKK 574 >UniRef50_B8D1I1 NADH dehydrogenase I subunit F n=2 Tax=Bacteria RepID=B8D1I1_HALOH Length = 408 Score = 407 bits (1046), Expect = e-112, Method: Composition-based stats. Identities = 148/397 (37%), Positives = 232/397 (58%), Gaps = 9/397 (2%) Query: 25 WLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNI 84 D Y+ + ++AL + +I+ ++K +GL+GRGGAGF TGLKW L K+++ Sbjct: 14 DFDSYK----FPALKRAL-DMDKKDIIEELKKSGLRGRGGAGFPTGLKWELALKEKA-GE 67 Query: 85 RYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLR 144 +Y++CN DE EPGT+KDR L+E P ++EG+LI A+ + A++GYI++RGEY R Sbjct: 68 KYIICNGDEGEPGTFKDRYLLENSPLKVLEGILIGAYTIGAHQGYIYIRGEYALPINIFR 127 Query: 145 RAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFP 204 + I EA + G+LG +MG+ + F+L + GAG Y+CG+ET+LINS+EG+R R KPP+P Sbjct: 128 QVIKEAKKRGILGNRVMGSDYSFDLKLIKGAGAYVCGDETSLINSIEGKRGTSRIKPPYP 187 Query: 205 ATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWEL 264 G + KPT VNNVETL I+ G + Y ++ + GTKL+ SG + NPG++E+ Sbjct: 188 TRQGLFNKPTVVNNVETLAAAAEIILQGADKYGSMGTEQSRGTKLVCLSGDICNPGVYEV 247 Query: 265 PFGT-TAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGT 323 FGT T +E+++ + GG++ K PGG T L + LD+P +E I K GS LG+ Sbjct: 248 EFGTMTIKELIDTFGGGVKCSSGLKFVIPGGISTSVLKDDELDIPYTYEDIEKKGSSLGS 307 Query: 324 ALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILR-ALERGEGQPGDIE 382 + V + + L+ N+ FF E+CG C PCR+G +L+ + G + + Sbjct: 308 GAVVVVSEDHYLPDLMLNVSRFFMDETCGTCFPCREGNRRVHLLLKNKISDGRFDRDEKK 367 Query: 383 TLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEF 419 + + R + C ++ + S + F +E Sbjct: 368 LISDIGRAIHLAA-RCGLGQTSLNFVTSVLNKFEDEL 403 >UniRef50_C8QXK3 NADH dehydrogenase (Quinone) n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QXK3_9DELT Length = 601 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 164/451 (36%), Positives = 246/451 (54%), Gaps = 25/451 (5%) Query: 9 ETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFS 68 + ++ P ++ Y + GY L P EI++++ +GL+GRGG G+ Sbjct: 143 RQVKVVLEQFENIDPERIESYLAAGGYRALLDCLHHRRPVEIIDEITRSGLRGRGGGGYP 202 Query: 69 TGLKWSLMPK----------------------DESMNIRYLLCNADEMEPGTYKDRLLME 106 GLKWS + K +Y++CNADE +PG + DR ++E Sbjct: 203 VGLKWSTVAKAGAFVPQAGRSSRQSAGATAADRPDGPRKYVICNADEGDPGAFMDRSVLE 262 Query: 107 QLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFD 166 PH ++EGM I+A+A+ A GY+++R EY A LR+AI +A + GLLG+NI G+ F+ Sbjct: 263 CAPHRVLEGMAIAAYAVGADFGYLYVRAEYPLAVERLRKAIVQAEKRGLLGRNIGGSAFN 322 Query: 167 FELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVP 226 F++ + GAG ++CGEETAL+ S+EGRR PR +PP+PA G WG PT +NNVETL NV Sbjct: 323 FQVEIRLGAGAFVCGEETALLASIEGRRGQPRPRPPYPAEHGLWGCPTLINNVETLANVA 382 Query: 227 AILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLK 286 AI+ G +W+ + K GTK+ +G++KN GL E+P G + EI+ + G G Sbjct: 383 AIINRGADWFAALGTEKSKGTKVFALAGKIKNTGLIEVPMGISIHEIVHEMGSGEVGG-- 440 Query: 287 FKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFF 346 KA Q GG + H LP+++ES+ GS +G+ + +D MV + R EF Sbjct: 441 IKAVQTGGPSGGCIPAEHFHLPVDYESLQAEGSIMGSGGMIIMDEGAAMVDVARFFMEFC 500 Query: 347 ARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVE 406 ESCG C PCR G + +L + RGEG D+ LE+LC L + C A Sbjct: 501 VEESCGKCAPCRVGTTQVLLLLEKIGRGEGTAADLGQLEELCHLLQQ-TSLCGLGQSAAN 559 Query: 407 PLQSAIKYFREEFEAGIKQPFSNTHLINGIQ 437 P+ S +++FR E+E + ++ +G Q Sbjct: 560 PVLSTLRFFRREYEQLLVDNTGKSNETDGSQ 590 >UniRef50_C4LEV2 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LEV2_TOLAT Length = 570 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 160/423 (37%), Positives = 227/423 (53%), Gaps = 16/423 (3%) Query: 10 THPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFST 69 +H + D L Y S + G KA + PDE++ ++ +GL GRGGAGF T Sbjct: 162 SHRPITGMVGDSFTTTL-TYASHHANAGITKA-AAMEPDEVIAEISASGLCGRGGAGFPT 219 Query: 70 GLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGY 129 G KW M D + +++Y++CNADE EPGT+KDR+ + L+ EGM I+A+A++A +G Sbjct: 220 GTKWK-MAADANGDVKYMICNADEGEPGTFKDRITLSWFADLVFEGMTIAAYAIRASQGI 278 Query: 130 IFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMG-TGFDFELFVHTGAGRYICGEETALIN 188 ++LR EY +L + + EAGLLG +I G GF+F++ + GAG Y+CGEETALI Sbjct: 279 VYLRAEYAYLLPHLEQVLKARREAGLLGCDISGKEGFNFDIRIQMGAGSYVCGEETALIE 338 Query: 189 SLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTK 248 SLEG R PR++PP+P +G G+PT VNNVETL V ILA G +W+ I K G K Sbjct: 339 SLEGNRGEPRNRPPYPTEAGFLGQPTVVNNVETLATVSVILARGAQWFSGIGTEKSKGFK 398 Query: 249 LMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLP 308 L SG PGL+ELP+G+T +L G KA Q GG FL A Sbjct: 399 LFSVSGECARPGLYELPWGSTVSGLLALAGG-----EGAKAVQIGGYSGRFLPAAEFGRK 453 Query: 309 MEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKIL 368 + +E +G S + + +++ + N EFF ESCG CTPCRDG + + Sbjct: 454 LAYEDLGAGSS------VIIYGPDRDLLEVAENYLEFFVEESCGQCTPCRDGNVVLLNGI 507 Query: 369 RALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFS 428 R+L G+ ++ L L + + C + + L S +YFR E A + S Sbjct: 508 RSLRNGKCSGQQLDELLSLAETICVA-SKCGLGQSSPKVLLSINRYFRNEINAHLTAEHS 566 Query: 429 NTH 431 Sbjct: 567 ARS 569 >UniRef50_Q1QYV5 NADH dehydrogenase (Quinone) n=66 Tax=Proteobacteria RepID=Q1QYV5_CHRSD Length = 595 Score = 399 bits (1026), Expect = e-110, Method: Composition-based stats. Identities = 150/424 (35%), Positives = 229/424 (54%), Gaps = 28/424 (6%) Query: 1 MKNIIRTPETHP--LTWRLRDDKQPVWLDEYRSKNGYEGARKALT-GLSPDEIVNQVKDA 57 + ++I T HP + W+ L +YR++ GY ++ + ++ ++ A Sbjct: 190 VASVIDTGHYHPEAILWQR--------LADYRAEGGYALLADCHAGRVTVEALMQALETA 241 Query: 58 GLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGML 117 L+G GGAGF T KW+ + ++ RY NADE EPGT+KDR+ +E+ PH +EG L Sbjct: 242 NLRGLGGAGFPTFKKWTFVRQEAG--PRYCAINADEGEPGTFKDRVYLERSPHRFLEGAL 299 Query: 118 ISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGR 177 +SA+A++A YI+LR EY LR AIAE + GL+ + + + GAG Sbjct: 300 VSAWAVEAEALYIYLRDEYPGLHRVLREAIAELEDEGLVVPDY--------IVLRRGAGA 351 Query: 178 YICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQ 237 YICGEE+A+I SLEG+ PR +PPF A G + +PT VNNVET+ +P I G E + Sbjct: 352 YICGEESAMIESLEGKPGKPRHRPPFVAQRGLFDRPTLVNNVETVYWIPLIWQRGAEAFA 411 Query: 238 NISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGT 297 + G + SGRVK+PG+ P G T E++E+Y GGM +G + A+ PGGA Sbjct: 412 RQGRHGRVGLRSFSVSGRVKHPGVHLAPAGITLEELIEEYCGGMAEGHRLVAYLPGGASG 471 Query: 298 DFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPC 357 L + ++P++F+++ G +G+A + + + ++ ++ NL FFA ESCG CTPC Sbjct: 472 GILPASKANVPLDFDTLQAYGCFIGSAAVIVLSDQDDLRAVATNLLAFFADESCGQCTPC 531 Query: 358 RDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFRE 417 R G + +L G D TL +L + + + C A P+ +K FR Sbjct: 532 RVGTEKMLTLLE------GDEWDAATLTRLSQVM-MDASICGLGQAAPNPVLGLLKDFRG 584 Query: 418 EFEA 421 E A Sbjct: 585 ELAA 588 >UniRef50_C9KNE8 Protein HymB n=2 Tax=Veillonellaceae RepID=C9KNE8_9FIRM Length = 416 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 154/410 (37%), Positives = 228/410 (55%), Gaps = 3/410 (0%) Query: 11 HPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTG 70 + + Y + G+E RKA+T + P+EI + + +KGRGGA + G Sbjct: 4 VHFLTKNFGKYDTSSIGSYMNVGGFEALRKAVT-MDPEEITDLLTAVKIKGRGGAEYPLG 62 Query: 71 LKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYI 130 KWS + ++CNADE E T+KDR L+ P L+E M+I+A+ + A G+I Sbjct: 63 RKWSQARAVRGER-KVVICNADEGETTTFKDRELICHDPFNLIEAMIIAAYVVGASDGFI 121 Query: 131 FLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSL 190 ++R EY L AI +A G LG NI+G GFDF++ +++GAG Y+CGE TALI S+ Sbjct: 122 YMRAEYACFRPLLLNAIRQAKNYGFLGTNILGRGFDFDIHLYSGAGAYVCGEGTALIRSI 181 Query: 191 EGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLM 250 EG+ PR KPPF SG + +PTC+NNVETL VP +L + Y + + GTKL+ Sbjct: 182 EGKAGRPRMKPPFIKVSGVFARPTCLNNVETLSLVPHLLLDEEGVYASCGSGESIGTKLV 241 Query: 251 GFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPME 310 +G V +PG++E+PFGTT REIL + AGG++ K + Q GGA ++ LD P Sbjct: 242 SVAGNVNHPGVFEIPFGTTVREILYELAGGIQHDRKIRLIQFGGASGKIADDSILDTPYT 301 Query: 311 FESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRA 370 +E + AG +G+ + +D +++ +R +EFF ESCG CTPCR+G IL Sbjct: 302 YEDLRAAGVMVGSGGMLVIDERTSVLDFLRMNQEFFWEESCGQCTPCREGNLHIKIILDK 361 Query: 371 LERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFE 420 + G DI + ++ R + + C A L SA+K F + F+ Sbjct: 362 MATGTATREDIAIMMKIARVMSM-SSLCGLGETAQNSLLSAMKVFPDLFD 410 >UniRef50_Q2SQP5 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit n=3 Tax=Proteobacteria RepID=Q2SQP5_HAHCH Length = 611 Score = 397 bits (1019), Expect = e-109, Method: Composition-based stats. Identities = 157/440 (35%), Positives = 225/440 (51%), Gaps = 18/440 (4%) Query: 6 RTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGA 65 P + PV L + G + A LSP E++ QV+++ L+GRGGA Sbjct: 171 SHPLVQAMVRNNIRQPGPVLLTDANPDQGLQAAL----QLSPLEVIAQVEESLLRGRGGA 226 Query: 66 GFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKA 125 GF TG KW L + RY++CNADE EPGT+KDR+L+ + P LL GM I+A+A+ A Sbjct: 227 GFPTGRKWRLAANTPAE-ERYVICNADEGEPGTFKDRVLLTEKPDLLFAGMTIAAYAVGA 285 Query: 126 YRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMG-TGFDFELFVHTGAGRYICGEET 184 G ++LRGEY L + E LLG I+G F F++ + GAG YICGEE+ Sbjct: 286 RHGILYLRGEYRYLRAYLEATLQRRREQNLLGAGILGRDDFSFDIRIQMGAGAYICGEES 345 Query: 185 ALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKD 244 +LI+S EG+R P+++PPFP SG G PT VNNVETL VP I+ G W++ + + Sbjct: 346 SLISSCEGKRGEPKNRPPFPVQSGYLGHPTVVNNVETLSCVPRIMEQGAPWFRGMGTTGS 405 Query: 245 AGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAH 304 +GTKL+ SG PG++E+ FG T EIL A GGA + Sbjct: 406 SGTKLLSVSGDCVRPGIYEIAFGVTLAEILTQAGA-----QDAAAIVVGGASGQIVGRTE 460 Query: 305 LDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWS 364 + FE + AG+ + + N++ +FF ESCG+CTPCR G + Sbjct: 461 FHRRLCFEDLASAGA------IVCFNSSRNILEAAAYYMDFFIEESCGYCTPCRVGNVFL 514 Query: 365 VKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIK 424 K L + GEG+P D++ L L + + C + P+ S ++YF + A +K Sbjct: 515 KKGLEKIMHGEGEPEDLDYLRSLSDTI-IATSRCGLGHTSPNPILSTMEYFPLVYSAMVK 573 Query: 425 QPFSNTHLINGIQPNLLKER 444 + IQ L + R Sbjct: 574 ERPGGMQAGFNIQKALDEAR 593 >UniRef50_C0X553 NADH dehydrogenase (Quinone) n=24 Tax=Firmicutes RepID=C0X553_ENTFA Length = 432 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 146/411 (35%), Positives = 229/411 (55%), Gaps = 8/411 (1%) Query: 11 HPLTWRLRDD-KQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFST 69 P+ + + EY +G++G ++A++ LS +EI+N++ A L+GRGGA + Sbjct: 6 QPMLLERMGKMQSATDVAEYCKYDGFDGLKRAIS-LSDEEILNELDIAHLRGRGGAAYPL 64 Query: 70 GLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGY 129 G KW + + +Y++CNADE EPGT+KD++L+ + P ++EGM+I+ + A GY Sbjct: 65 GKKWRHLYHAKGT-TKYIVCNADEGEPGTFKDKVLLSEDPLSVIEGMIIAGYLFSAKAGY 123 Query: 130 IFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMG-TGFDFELFVHTGAGRYICGEETALIN 188 I++RGEY + A+ A +AG LG+NI+G GF++++ + +GAG YICGE +AL+N Sbjct: 124 IYMRGEYRRIQKTFQEALDNARQAGFLGENILGIEGFNYDITIISGAGAYICGENSALLN 183 Query: 189 SLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTK 248 S+EG+ PR KPP A G + +PT VNNVE+ +VP IL G + + + + GTK Sbjct: 184 SIEGKTGRPRVKPPHLADVGLYLQPTLVNNVESFASVPVILREGGQAFLEMGTADGGGTK 243 Query: 249 LMGFSGRVKNPGLWELPFGTTAREIL--EDYAGGMRDGLKFKAWQPGGAGTDFLTEAHL- 305 L+ SG +KN GL+E+ GT EI+ E Y GG G K GG A L Sbjct: 244 LICLSGHIKNRGLYEVNLGTPLEEIIYGEQYGGGSATGRALKFIHFGGQSGPIGAVATLR 303 Query: 306 DLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSV 365 D +E + +G+ + +D +N+V + ++ FFA ESCG CTPCR G + Sbjct: 304 DCLYSYEDLWAHDLSVGSGAIVVMDDSVNVVDYLVHVAAFFAHESCGKCTPCRLGTTRIL 363 Query: 366 KILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFR 416 ++L R E D+ LE++ + + C P++SA+ F Sbjct: 364 ELLSKFNRNEATASDLPRLEKMLTHVTR-LSACGLGQSVANPMKSALALFP 413 >UniRef50_A9BV38 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=188 Tax=cellular organisms RepID=A9BV38_DELAS Length = 727 Score = 383 bits (984), Expect = e-105, Method: Composition-based stats. Identities = 162/424 (38%), Positives = 230/424 (54%), Gaps = 10/424 (2%) Query: 3 NIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGR 62 I LT+ P+ L +Y + G++G +A + P IV +V D+GL+GR Sbjct: 296 AIAYLARQERLTFARVGVIDPLNLADYAAHGGWQGLERA-ARMEPAAIVQEVLDSGLRGR 354 Query: 63 GGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFA 122 GGA F G+KW + +Y+ CNADE + GT+ DRLLME P+ L+EGM I+ A Sbjct: 355 GGAAFPAGIKWKTVAAAAG-PQKYIACNADEGDSGTFADRLLMEGDPYTLIEGMAIAGLA 413 Query: 123 LKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGE 182 + A +G +++R EY A LR AIA A AG LG+++ G+G F + V GAG Y+CGE Sbjct: 414 VGATQGLVYVRSEYPHAVATLREAIARAEAAGWLGRDVAGSGRAFHMEVRKGAGSYVCGE 473 Query: 183 ETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKS 242 ETA++ S+EGRR R+KPP PA G WG+PT +NNV TL VP ILA G +YQ Sbjct: 474 ETAMLESIEGRRGIVRAKPPLPAIEGLWGRPTVINNVITLATVPMILARGAAFYQGFGMG 533 Query: 243 KDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTE 302 + GT +G + GL E FG + RE++ED+ GG G KA Q GG ++ Sbjct: 534 RSRGTLPFQLAGNIARGGLVEKAFGLSLRELVEDFGGGTATGRTVKAVQVGGPLGSYVAP 593 Query: 303 AHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLP 362 A D P+++E+ G+ +G + D +M L R EF A ESCG CTPCR G Sbjct: 594 ADWDAPLDYEAYAAKGNVVGHGGIVVHDDTADMAQLARYAMEFCAIESCGKCTPCRIGST 653 Query: 363 WSVKILRA-------LERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYF 415 V+++ G G + LE LC + G + CA P++SA+ ++ Sbjct: 654 RGVEVIDRIVRAGADPAAHAGHAGQVALLESLCDTMQHG-SMCAMGGMTPYPVRSALNHY 712 Query: 416 REEF 419 ++F Sbjct: 713 SQDF 716 >UniRef50_A1WBG0 NADH dehydrogenase (Quinone) n=11 Tax=Proteobacteria RepID=A1WBG0_ACISJ Length = 640 Score = 383 bits (984), Expect = e-105, Method: Composition-based stats. Identities = 134/398 (33%), Positives = 205/398 (51%), Gaps = 18/398 (4%) Query: 25 WLDEYRSKNGYEGARKALT-GLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMN 83 L YR+ GY+ A + + + ++ ++D+GL+G GGAGF G KW ++ + Sbjct: 231 DLVTYRAHGGYQTAAALVNGEMDAEAVLAAMEDSGLRGLGGAGFPAGRKWRIVR--DQPA 288 Query: 84 IRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNL 143 R + N DE EPGT+KDR +E+ PH +EG+LI+A + YI+LR EY L Sbjct: 289 PRLMAVNIDEGEPGTFKDRTYLERDPHRFLEGVLIAAQVVGTEAVYIYLRDEYHGCRALL 348 Query: 144 RRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPF 203 + A+ E + + GAG YICGEE+A+I S+EG+R PR +PP+ Sbjct: 349 QSALEELRAESPCPL--------PHIELRRGAGAYICGEESAMIESIEGKRGEPRMRPPY 400 Query: 204 PATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWE 263 A G +G+PT +N ETL V I+ G +W+ + + G + SGRVK PG+ Sbjct: 401 IAQVGLFGRPTLEHNFETLYWVRDIVEKGPQWFASFGRHGRRGLRSFSVSGRVKEPGVKL 460 Query: 264 LPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGT 323 P G T RE++++Y GGM DG A+ PGGA L D+P++F+++ G +G+ Sbjct: 461 APAGITLRELVDEYCGGMADGHVLYAYLPGGASGGILPARLSDVPLDFDTLQPHGCFIGS 520 Query: 324 ALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIET 383 A + + N+ FFA ESCG CTPCR G + ++++ D +T Sbjct: 521 AAVIVLSQHDRARDAALNMMRFFAHESCGQCTPCRVGTAKAAQLMQ------APLWDEDT 574 Query: 384 LEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEA 421 L+ L + + + C A P++ KYF E Sbjct: 575 LDDLAQVMADA-SICGLGQAAPNPIRCIHKYFAHEVGE 611 >UniRef50_Q47HE6 NADH dehydrogenase (Ubiquinone), 24 kDa subunit:Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit n=4 Tax=Proteobacteria RepID=Q47HE6_DECAR Length = 632 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 153/384 (39%), Positives = 215/384 (55%), Gaps = 15/384 (3%) Query: 46 SPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDE--SMNIRYLLCNADEMEPGTYKDRL 103 P ++++K A L+GRGGAGF+TGLKW + R ++CNADE EPGT+KDR+ Sbjct: 225 GPGATLDEIKRANLRGRGGAGFTTGLKWEACRNAPLKAGAQRIVVCNADEGEPGTFKDRV 284 Query: 104 LMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGT 163 L+ + P L+ EGM ++A+A+ A RG+++LRGEY +L +A LLGK+I+G Sbjct: 285 LLSRNPDLVFEGMTVAAYAVGATRGFVYLRGEYRYMLDHLNAVLAHRRREKLLGKDILGL 344 Query: 164 -GFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETL 222 G DF++ +H GAG Y+CGEE+ALI SLEG+R PR++PPFP T+G +PT VNNVET Sbjct: 345 PGADFDIEIHVGAGAYVCGEESALIESLEGKRGTPRNRPPFPVTNGYLDQPTIVNNVETF 404 Query: 223 CNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMR 282 I NG +WY I AGTKL+ SG + PG++E PFG + R++LED Sbjct: 405 AAAALIALNGGDWYAAIGTKHSAGTKLLSVSGDCERPGIYEYPFGVSVRQVLEDCGA--- 461 Query: 283 DGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNL 342 +A Q G + E D + FE I AG+ ++ +M + RN Sbjct: 462 --RDTQAVQVSGPSGICIAEQEFDRVIGFEDIPTAGAF------TVFNNTRDMFEVARNY 513 Query: 343 EEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAP 402 FF ESCG+CTPCR G ++ L G G P D +E+L + L + C Sbjct: 514 VHFFQHESCGFCTPCRVGTSLLKNLMDKLHNGVGSPYDFAEIEKLNQLL-QSMSHCGLGH 572 Query: 403 GAVEPLQSAIKYFREEFEAGIKQP 426 A P+ I+ FR +E + Q Sbjct: 573 TACNPVLDTIERFRPAYERRMAQK 596 >UniRef50_B6K7D1 NADH-quinone oxidoreductase subunit F n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K7D1_SCHJY Length = 418 Score = 381 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 138/408 (33%), Positives = 217/408 (53%), Gaps = 6/408 (1%) Query: 23 PVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDE-- 80 + + + Y L + ++N + + L+GRGG+GF TG KW + Sbjct: 13 ARSIAFAKKQGRYSKLSDILKKKG-EILINTISRSMLRGRGGSGFYTGRKWESVVATAEL 71 Query: 81 -SMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEA 139 +RYL+ NA E EPG++KDR L+ +PH ++EG ++SA A+ A YI +R EY + Sbjct: 72 LKHPMRYLVVNASEGEPGSFKDRYLLASVPHTVIEGSIMSAKAIGASACYISVRAEYYKE 131 Query: 140 AVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRS 199 A++L+ AI EA E G LGKNI+GT F ++F+H G G YI GEETAL+ SLEG+ A PR Sbjct: 132 ALHLQEAINEAYEEGYLGKNILGTDFSLDIFIHRGEGNYISGEETALLESLEGKAAKPRV 191 Query: 200 KPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNP 259 +PPFP G +G T VNNVET+ N+P IL NG EW++++ + GTKL SG V+ P Sbjct: 192 RPPFPTEHGVFGCATAVNNVETIANIPCILENGDEWFRSLGSPNNYGTKLFCISGDVRQP 251 Query: 260 GLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHL-DLPMEFESIGKAG 318 ++E +E++E + G + A PGG + + M+++ + + G Sbjct: 252 NVYEERLSIPLKELIETHGGVIGGWDSLVAVFPGGPSMGICNKEQCEHMLMDYDYLRQIG 311 Query: 319 SRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQP 378 + LGTA + ++ + + N +F+ +E+C C CR+G ++L + G+ P Sbjct: 312 TGLGTASVIVLNDIDKVFEAILNFSKFYKKETCRKCLACRNGTKIINELLELVREGKATP 371 Query: 379 GDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQP 426 I L Q+ ++ T C + L S K F + + + Sbjct: 372 SVITDLRQVSNYVTKD-TICNFSAAPSLLLNSYFKNFPADIQRRTRAK 418 >UniRef50_B4Q4H9 GD22602 n=4 Tax=Coelomata RepID=B4Q4H9_DROSI Length = 499 Score = 380 bits (976), Expect = e-104, Method: Composition-based stats. Identities = 155/453 (34%), Positives = 227/453 (50%), Gaps = 61/453 (13%) Query: 20 DKQPVWLDEYRSKN---------GYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTG 70 D+ ++ + Y + G K + D IVN++K +GL+GRGGAGF +G Sbjct: 52 DEDRIFTNLYGRHDWRLKGALKRGDWYKTKEIVLKGADWIVNEIKTSGLRGRGGAGFPSG 111 Query: 71 LKWSLM--PKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRG 128 +KWS M P D +L +DR +M PH LVEG LI+ A+ A Sbjct: 112 MKWSFMNKPGDGRPKAWHL------------QDREIMRHDPHKLVEGCLIARRAMGAQAA 159 Query: 129 YIFLRGEYIEAAVNLRRAIAEATEAGLLG------------------------------- 157 YI++RGE+ LR I+ A L Sbjct: 160 YIYIRGEFYNEEPALRSEISAHPPAVRLSDADAPWAQLPTLIVRVSTSFQHATGHAEPPS 219 Query: 158 ----KNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKP 213 K GTG+DF++F+H GAG YICGEETALI SLEG++ PR KPPFPA G +G P Sbjct: 220 WSDWKKACGTGYDFDVFMHRGAGAYICGEETALIESLEGKQGKPRLKPPFPADVGVFGCP 279 Query: 214 TCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREI 273 T V NVET+ P I G W+ + +++++GTKL SG V P E +E+ Sbjct: 280 TTVTNVETVAVAPTICRRGGVWFASFGRTRNSGTKLFNISGHVNRPCTVEEEMSIPLKEL 339 Query: 274 LEDYAGGMRDGLK-FKAWQPGGAGTDFLTEAHL-DLPMEFESIGKAGSRLGTALAMAVDH 331 +E + GG+ G PGG+ T + + D+ M+F+ + A + LGTA + +D Sbjct: 340 IERHCGGVTGGWDNLLGVIPGGSSTPIIPKNVCDDVIMDFDGLIAAQTSLGTAAIIVMDK 399 Query: 332 EINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFL 391 +++ + L F+ ESCG CTPCR+G+ W KI+ +G+ QP +I+ L ++ + + Sbjct: 400 STDVIKAIARLISFYKHESCGQCTPCREGIGWMNKIMTRFVKGDAQPAEIDMLWEISKQI 459 Query: 392 GPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIK 424 G T CA GA P+Q I++FR E E ++ Sbjct: 460 -EGHTICALGDGAAWPVQGLIRHFRPEIEKRMQ 491 >UniRef50_B8ERX4 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=1 Tax=Methylocella silvestris BL2 RepID=B8ERX4_METSB Length = 603 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 139/392 (35%), Positives = 207/392 (52%), Gaps = 14/392 (3%) Query: 34 GYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADE 93 G KA SP++++ ++ ++ L+GRGGAGF TG+KW L K N RY++CNADE Sbjct: 195 GRADGIKAALDQSPEQVIEEISNSKLRGRGGAGFPTGMKWRLTRKAVGEN-RYVICNADE 253 Query: 94 MEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEA 153 EPGT+KDRLL+ + P L+ +GM I+ +AL A RG ++LRGEY L+ + + Sbjct: 254 GEPGTFKDRLLLTEFPDLVFDGMTIAGYALGARRGVVYLRGEYAYLWDPLQEVLRDRRAL 313 Query: 154 GLLGKNIMG-TGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGK 212 GLLG +I G +GFDF++ + GAG Y+CGEE+AL+ S+EG+R PR +PPFP G + Sbjct: 314 GLLGADICGRSGFDFDIRIQLGAGAYMCGEESALLESMEGKRGAPRDRPPFPTERGYLRQ 373 Query: 213 PTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTARE 272 PT ++NVET I+ G W+ + GTKLM SG + PG++E+PFG T E Sbjct: 374 PTAIDNVETFACAARIVEKGAAWFTGFGTKESTGTKLMSVSGDCQRPGVYEVPFGITVNE 433 Query: 273 ILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHE 332 +L+ + Q G + + +E + GS + Sbjct: 434 LLDLVGAPDAEY-----VQISGPSGQSVAPKDFGRRIAYEDLSTGGSTM------IFGPN 482 Query: 333 INMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLG 392 +++ +V +FF ESCGWC PCR G P + + + G DI E L + Sbjct: 483 RDVLDIVLQFADFFVHESCGWCAPCRVGAPLLKQGMEKIVAGRATLADIAATEALANTV- 541 Query: 393 PGKTFCAHAPGAVEPLQSAIKYFREEFEAGIK 424 + C A P+ + + F E +EA + Sbjct: 542 MRMSRCGLGQTAPNPILTTMLSFPELYEARLA 573 >UniRef50_A8ERL2 NADH-quinone oxidoreductase, F subunit n=2 Tax=Campylobacteraceae RepID=A8ERL2_ARCB4 Length = 416 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 165/415 (39%), Positives = 239/415 (57%), Gaps = 5/415 (1%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 + + D L+ + Y K L + P+E+ +V +GL+G+GG G + G K Sbjct: 5 IVSKNFDIPNSHKLEVALANGRYSSIDK-LFTMKPEEVTAEVTKSGLRGKGGGGAACGPK 63 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 W LMP + RYL+ N DE EPGT+KDR + + PH+L+EG++ + +A++A YI++ Sbjct: 64 WELMPPVD-ERPRYLIVNGDESEPGTFKDRQIFQYDPHILIEGIICTCWAIQANHAYIYI 122 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGT-GFDFELFVHTGAGRYICGEETALINSLE 191 RGEY L AI EA EA ++G IM F ++ VH G G YICGE++ALI SLE Sbjct: 123 RGEYKFFIDRLNEAIKEAYEAKIIGDKIMDKYDFKVDITVHRGGGAYICGEKSALIESLE 182 Query: 192 GRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMG 251 G+R +PR KP + P VNNVET+ +VP I+ NG E Y K GT L Sbjct: 183 GKRGHPRLKPHGKECEWFFDNPATVNNVETISSVPNIVENGAEGYTKYGTEKSPGTMLFA 242 Query: 252 FSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPM-E 310 SG VKNPG++E+ +G + L GGM +G K KA PGG+ LT + ++ + + Sbjct: 243 ISGPVKNPGVYEMAYGNKMIDFLNVLGGGMLEGKKLKAIIPGGSSCPILTASEVEKAVLD 302 Query: 311 FESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRA 370 +ES+ + GS LGT + +D + +MV + +N+ EF+ ESCG CTPCR+G W KIL+ Sbjct: 303 YESMWEIGSTLGTGGMIVIDEDTSMVEVAKNIIEFYHHESCGQCTPCREGTGWIDKILKK 362 Query: 371 LERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 + GE D++T+ +C L GKT C AP + + S +K F EEF+A +K Sbjct: 363 VIAGEASDKDLKTIMDVCDTLN-GKTVCVFAPAVKDIIASIVKKFPEEFKAYLKN 416 >UniRef50_B1Y7Y8 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=11 Tax=Proteobacteria RepID=B1Y7Y8_LEPCP Length = 627 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 150/380 (39%), Positives = 208/380 (54%), Gaps = 16/380 (4%) Query: 49 EIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIR---YLLCNADEMEPGTYKDRLLM 105 ++++VK + L+GRGGAG+ TG KW L + Y++CNADE EPGT+KDR+L+ Sbjct: 226 ALLDEVKQSNLRGRGGAGYQTGRKWELCREAPGNTPDNTHYVVCNADEGEPGTFKDRVLL 285 Query: 106 EQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMG-TG 164 + L EGM I+ FA+ A +G+++LRGEY L+ + EA LLG I G G Sbjct: 286 SRYADSLFEGMTIAGFAIGARQGFVYLRGEYRYLLEPLQAVLQRRREANLLGAAIQGREG 345 Query: 165 FDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCN 224 FDF++ +H GAG Y+CGEE+ALI SLEG+R PR +PP+P G +PT VNNVET C Sbjct: 346 FDFDIDIHVGAGAYVCGEESALIESLEGKRGTPRIRPPYPVEHGYLDEPTIVNNVETYCA 405 Query: 225 VPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDG 284 V I +G W+ I K GTK+ SG + PG++E P+GT ILED Sbjct: 406 VTHIAVHGAAWWAGIGTPKSTGTKIHSVSGDCERPGIYEYPYGTRIGRILEDCGA----- 460 Query: 285 LKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEE 344 +A Q GG L+ + FE + AG+ + D +M + RN + Sbjct: 461 RDTQAVQVGGPSGVCLSAFEFGRRIAFEDVPTAGAFM------VFDRSRDMFEVARNFAQ 514 Query: 345 FFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGA 404 FFA ESCG+CTPCR G VK + L G+G D++ L +L + + T C A Sbjct: 515 FFAHESCGFCTPCRVGTALVVKRMDKLAAGQGSRHDVDVLFELDKLMHTA-THCGLGGAA 573 Query: 405 VEPLQSAIKYFREEFEAGIK 424 PL+ I FR +E + Sbjct: 574 CNPLRDTIAKFRPAYEQRLT 593 >UniRef50_A1SU84 Hydrogenase, NADP-reducing subunit C n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SU84_PSYIN Length = 588 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 135/390 (34%), Positives = 203/390 (52%), Gaps = 14/390 (3%) Query: 36 EGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEME 95 E +KAL +P + + ++ +GL+G GGAGF T KW + RY++CNADE E Sbjct: 187 EAIKKALAT-APHDSLAEIDKSGLRGCGGAGFKTAEKWKSCLLSDDNQ-RYVVCNADEGE 244 Query: 96 PGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGL 155 PGT+KDR+L+ LL+EGM + A+ + A +G+I+LR EY L + A L Sbjct: 245 PGTFKDRVLLNSYADLLIEGMTLCAYVIGAQKGFIYLRYEYQHLYKKLLETLQRRRAANL 304 Query: 156 LGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTC 215 LG +I+ + F++ + GAG Y+CGEE+AL+ SLEGRRA PR +PPFP T G KPT Sbjct: 305 LGAHILNSELSFDIEIFMGAGSYVCGEESALLESLEGRRAIPRIRPPFPVTHGYLDKPTV 364 Query: 216 VNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILE 275 VNNVET C I+ G E + + G K++ SG V+ G++E+P G + +L Sbjct: 365 VNNVETFCYAALIIEKGAENFSAQGLAGFTGCKILSISGDVEKTGIYEIPLGLPVKNVLN 424 Query: 276 DYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINM 335 +A Q GG +T A + F+ + GS + + ++ Sbjct: 425 LCGA-----QSVQAVQVGGPSGTLITPAEFSRVISFDDLHTGGSFM------VFNQSRDI 473 Query: 336 VSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGK 395 + N FF +ESCG+CTPCR G + + G+G D+++++QL + G Sbjct: 474 LENALNFTHFFMQESCGFCTPCRVGTKLIYDLADKVATGQGARLDLDSIKQLNHVMN-GM 532 Query: 396 TFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 + C A EPL ++ F E F + Sbjct: 533 SHCGLGQRAAEPLLETLEKFPEYFVKRMTD 562 >UniRef50_C6I0C0 NADH dehydrogenase (Quinone) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I0C0_9BACT Length = 475 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 150/426 (35%), Positives = 234/426 (54%), Gaps = 10/426 (2%) Query: 2 KNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKG 61 I+ P+ + D L Y GY+G R+ L+GLSP +++ ++K++GL+G Sbjct: 25 MTIMEGPDRVLTNPAIFGDP---SLASYERGGGYKGLRRVLSGLSPSDVIAEIKESGLRG 81 Query: 62 RGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAF 121 RGG+GF T LKW + + +RY++ N E EPG++KD L+ + PH ++EGM+I+ F Sbjct: 82 RGGSGFPTALKWEKVANH-RVPVRYVVANGSEGEPGSHKDHYLISRSPHQILEGMIIACF 140 Query: 122 ALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICG 181 A+ A G++F++ + E LR+A EA AGLLG NI+G+GF ++ + G YI G Sbjct: 141 AVSAKSGHLFVKESFPEGINILRKAREEALAAGLLGNNILGSGFSVDIEIFVGPAAYIAG 200 Query: 182 EETALINSLEGRRANPRSKPPFP-ATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNIS 240 EETAL+ +LEGR PR KPPF G + KPT VNNVET +V ILA G ++ Sbjct: 201 EETALLEALEGRVPRPRPKPPFYPTEMGLYNKPTVVNNVETYAHVSRILAEGTVKFRERG 260 Query: 241 KSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFL 300 K GT + SG V+ P + ELP G + +L DYAGG G F+ + GG L Sbjct: 261 TPKSPGTMIFSVSGSVRRPVVVELPLGFSLERLLYDYAGGPLPGETFQCFFTGGPSFGIL 320 Query: 301 TEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDG 360 +D P+E++++ G+ LG+A + + + ++++ EF+ + SCG C PCR G Sbjct: 321 PAREIDTPLEYDALRAKGTGLGSAGIIVLGSKDSILATTAAFSEFYEKGSCGQCPPCRLG 380 Query: 361 LPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYF----R 416 + L L G+ IE L ++ + + G+ C + ++S +++F R Sbjct: 381 TESLHQTLEGLMNGQNSEDGIERLLKVTKMIK-GRGNCGLITASAFMVESLLEHFTPLLR 439 Query: 417 EEFEAG 422 EE + Sbjct: 440 EELASR 445 >UniRef50_A6GJI0 Putative NADH dehydrogenase I chain F n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GJI0_9DELT Length = 503 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 151/411 (36%), Positives = 223/411 (54%), Gaps = 17/411 (4%) Query: 10 THPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFST 69 + + + +D + A PD I+ Q+K +GL+GRGGAGF Sbjct: 108 PGAPSGGITPSHDALAIDLAGEDDPSYAAFDKARDEGPDWIIEQLKTSGLQGRGGAGFPA 167 Query: 70 GLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGY 129 +KW + ++ RY++ NADE EPGT+KDR +M + PH ++EGM I+A+ A + + Sbjct: 168 HIKWHAVR-TQAELTRYVVVNADEGEPGTFKDREIMLRRPHRMIEGMAIAAWVAGAAKAF 226 Query: 130 IFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINS 189 I++RGE+ + L AIAEA E ++ + G G YICGEETAL+ + Sbjct: 227 IYVRGEFRDCIRALEAAIAEAGERLDW----------LDIEIVEGHGAYICGEETALLEA 276 Query: 190 LEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKL 249 +EG+R PR KPP+P G WGKPT +NNVETL VP IL+ G EW++ + K++ G+KL Sbjct: 277 IEGKRGMPRLKPPYPTEKGLWGKPTLMNNVETLACVPEILSRGGEWFKALGKTEA-GSKL 335 Query: 250 MGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPM 309 SG V PG++ELP G + E++E G + KA+ PGGA + FL P+ Sbjct: 336 YCISGHVGRPGIYELPLGVSLDELVEAAGGYVGTP---KAFSPGGASSGFLPMDLRGEPL 392 Query: 310 EFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILR 369 +F + K GS LG+A + ++ ++M R + FF ESCG C PCR G + + Sbjct: 393 DFGGLAKLGSMLGSAGVVVLNDTVDMAVAARWQQIFFEDESCGQCAPCRIGCRVQRQAID 452 Query: 370 ALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFE 420 P + +E++ + G + C A PLQSA+KYF EEF+ Sbjct: 453 KFLDARA-PESLGHVEEVAWEMDAG-SICGLGMVASLPLQSAMKYFGEEFD 501 >UniRef50_Q1V283 NAD-dependent formate dehydrogenase beta subunit n=3 Tax=Candidatus Pelagibacter RepID=Q1V283_PELUB Length = 552 Score = 366 bits (939), Expect = e-99, Method: Composition-based stats. Identities = 144/393 (36%), Positives = 214/393 (54%), Gaps = 6/393 (1%) Query: 27 DEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRY 86 D+ + + ++ K EI + D+ L GRGGAGF TG+KW K S +Y Sbjct: 156 DKLSNLDQFKEQLKKFIATDKQEITKSLLDSNLTGRGGAGFPTGMKWDFCRKAPSEK-KY 214 Query: 87 LLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRA 146 ++CNADE + G + DR L+E P ++ GM+I + + + G +++RGEY ++ + A Sbjct: 215 VICNADEGDSGAFSDRYLLEDQPLKVLFGMVICGYVIGSDEGVLYIRGEYPKSIEAINGA 274 Query: 147 IAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPAT 206 I +AGLLG+NI+GT F F+L + G G YICGEETALI S+EGRRA +PPFP T Sbjct: 275 INSLKKAGLLGENILGTKFSFDLNICIGQGAYICGEETALIASIEGRRAEVDVRPPFPVT 334 Query: 207 SGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPF 266 G + KPT VNNVETL IL NG + + I K AGTKL+ F NPG++E+ Sbjct: 335 EGLYKKPTVVNNVETLAAATGILINGADKFSAIGNKKSAGTKLVCFDSFFNNPGVYEVEM 394 Query: 267 GTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLD-LPMEFESIGKAGSRLGTAL 325 GT +++L D GG ++ KA Q GG + ++ L ++F+ AG LG A Sbjct: 395 GTPMKKVLNDIGGGFKEP--IKALQIGGPLGGVIPITEIEKLNLDFQEFTAAGFMLGHAS 452 Query: 326 AMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLE 385 +++ + M+ + +L EF A ESCG C P R G ++ + + ++ L Sbjct: 453 IVSIPKDFPMIEYIHHLFEFSAEESCGKCFPGRLGSYRGKEMFDQAKNKTAKIP-LKLLN 511 Query: 386 QLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREE 418 +L + G CA P+ + +KYF +E Sbjct: 512 ELLVTMQKGC-LCALCGAIPTPIMNILKYFGDE 543 >UniRef50_A1Z9Z7 CG8102, isoform A n=7 Tax=melanogaster subgroup RepID=A1Z9Z7_DROME Length = 481 Score = 363 bits (933), Expect = 5e-99, Method: Composition-based stats. Identities = 137/419 (32%), Positives = 216/419 (51%), Gaps = 13/419 (3%) Query: 19 DDKQPVWLDEYRSKN---------GYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFST 69 DD V+ + Y + G L P+ I+ QV +GL+GRGGAGF Sbjct: 59 DDCDRVFQNLYGRHDWRLHGACQRGDWHRTAELLEQGPEWIMKQVSKSGLRGRGGAGFYA 118 Query: 70 GLKWSLMPKDESMNI-RYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRG 128 GLKW + + +S + + ++ N E EPGT KDR ++ PH L+EG+L+ A+ R Sbjct: 119 GLKWEFLRQTKSEKVPKMVIVNCAEGEPGTCKDRDILRHEPHKLIEGILLVGVAMGCGRA 178 Query: 129 YIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALIN 188 +++R + A NL A+AEA GLLG ++ GTG F++ V G RY+CGEETA+IN Sbjct: 179 IVYIRNRFYNEACNLHFALAEAYHHGLLGNSVCGTGIKFDVMVQRG-DRYLCGEETAMIN 237 Query: 189 SLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTK 248 L G+ PR +PPF G + P V N E++ VP IL G +W+ + +S + GTK Sbjct: 238 CLMGKLGRPRRRPPFLTEKGYFEHPCLVINAESIAVVPTILRRGSQWWAGLGRSYNTGTK 297 Query: 249 LMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLK-FKAWQPGGAGTDFLTEAHL-D 306 L SG+V NP E ++++E +AGG++ G A PGG T L + Sbjct: 298 LYCLSGQVNNPCTVEEEMSIPLKDLIERHAGGVKGGWDNLAAVFPGGLSTPLLDPSTAGK 357 Query: 307 LPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVK 366 + M+F+S+ AGS G + + + + ++++ +FF + +C C+ CRDG W + Sbjct: 358 VLMDFDSLTDAGSGFGCGAVIVMTKDCDPLAIMLRSIQFFEKHTCKQCSYCRDGAIWLPE 417 Query: 367 ILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 I +G+ P +I+ + + K CA A V +S ++ F + E + + Sbjct: 418 IFARFVKGQTHPHEIDWTLVIADKMRNSKPICALAYSQVSVAESLVRMFSRKIEERLLK 476 >UniRef50_D0IAF4 NAD-reducing hydrogenase hoxS subunit alpha n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0IAF4_VIBHO Length = 609 Score = 363 bits (931), Expect = 9e-99, Method: Composition-based stats. Identities = 132/396 (33%), Positives = 211/396 (53%), Gaps = 15/396 (3%) Query: 36 EGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEME 95 E + L P E+++ + L+GRGGAGFS GLKW + D + + +Y++CNADE E Sbjct: 194 ERVIRDAVTLVPMEVIDATSTSKLRGRGGAGFSAGLKWR-LCHDAAGDTKYVICNADEGE 252 Query: 96 PGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGL 155 PGT+KDR+++ + P + GM+I+ +A+ A G ++LR EY L + + E L Sbjct: 253 PGTFKDRVILTESPEQVFAGMIIAGYAIGAREGILYLRYEYRYLVDYLEKTLNSLRERNL 312 Query: 156 LGKNIMGTG-FDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPT 214 LG I G F F++ + GAG YICG+E+ALI S EG+R PR KPPFP G G PT Sbjct: 313 LGAKIGGNDKFSFDIRIQLGAGAYICGDESALIESCEGKRGTPRVKPPFPVHQGFMGCPT 372 Query: 215 CVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREIL 274 VNNVETL NV I G WY+++ ++ AGT+L+ SG V+ PG++E+ +G + +++L Sbjct: 373 AVNNVETLANVARIFEKGARWYESMGTAESAGTRLISVSGDVEKPGIYEIEWGISLKDVL 432 Query: 275 EDYAGGMRDGLKFKAWQPGGAGTDFLTEA-HLDLPMEFESIGKAGSRLGTALAMAVDHEI 333 E + Q G + ++ A + ++ + GS + +E Sbjct: 433 ELVGA-----RNPRVAQISGPSGECVSAAKDGNRVFSYKDLSCNGSLM------VFSYER 481 Query: 334 NMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGP 393 N++ +VR FF ESCG CTPCR G + + G D++ + + + Sbjct: 482 NLLEIVRRFIHFFMEESCGICTPCRAGNVELYNKVSLIIEGRAVEQDLDEIVEWANIIR- 540 Query: 394 GKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSN 429 G + C + +P+ ++++ F EE++ + Sbjct: 541 GSSRCGLGTTSPKPIITSMQAFPEEYKQKLVTQHGP 576 >UniRef50_B9MEW2 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=2 Tax=Comamonadaceae RepID=B9MEW2_DIAST Length = 661 Score = 362 bits (929), Expect = 2e-98, Method: Composition-based stats. Identities = 142/446 (31%), Positives = 213/446 (47%), Gaps = 50/446 (11%) Query: 3 NIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDE-IVNQVKDAGLKG 61 I R PE W V L YR++ GY A G P + ++ ++D+GL+G Sbjct: 210 AITRGPEAVAPPW--------VGLAAYRARGGYALAAGLAQGHVPADGVLAAMEDSGLRG 261 Query: 62 RGGAGFSTGLKWSLMP--------------------------KDESMNIRYLLCNADEME 95 GGAGF G KW ++ E ++ + N DE E Sbjct: 262 LGGAGFPAGRKWRIVREQAALAGRQAAPSEAAAPSAGSGPREAGERGSVALMAVNIDEGE 321 Query: 96 PGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGL 155 PGT+KDR +E+ PH +EG+L++A + YI+LR EY L+ AIAE Sbjct: 322 PGTFKDRTYLERDPHRFLEGVLVAAQVVGTAEVYIYLRDEYHGCRALLQAAIAELQADPP 381 Query: 156 LGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTC 215 + + GAG YICGEE+A+I S+EG+R PR +PP+ A G +G+PT Sbjct: 382 CAL--------PRIELRRGAGAYICGEESAMIESIEGKRGEPRMRPPYIAQVGLFGRPTL 433 Query: 216 VNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILE 275 +N ETL V I+ G +W+ + + G + SGRVK PG+ P G T RE+++ Sbjct: 434 EHNFETLYWVRDIVEKGPQWFASFGRHGRRGLRSFSVSGRVKEPGVKLAPAGITLRELVD 493 Query: 276 DYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINM 335 +Y GGM +G A+ PGGA L D+P++F+++ G +G+A + + Sbjct: 494 EYCGGMAEGHVLYAYLPGGASGGILPARLADVPLDFDTLQPHGCFIGSAAVIVLSQHDRA 553 Query: 336 VSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGK 395 N+ FFA ESCG CTPCR G + ++++ D +TL+ L + + Sbjct: 554 RDAALNMMRFFAHESCGQCTPCRVGTAKAAQLMQ------APLWDEDTLDDLAQVMADA- 606 Query: 396 TFCAHAPGAVEPLQSAIKYFREEFEA 421 + C A P++ KYF E Sbjct: 607 SICGLGQAAPNPIRCIHKYFAHEVGE 632 >UniRef50_A7IMB3 NADH dehydrogenase (Quinone) n=15 Tax=Proteobacteria RepID=A7IMB3_XANP2 Length = 422 Score = 362 bits (928), Expect = 2e-98, Method: Composition-based stats. Identities = 156/374 (41%), Positives = 211/374 (56%), Gaps = 2/374 (0%) Query: 47 PDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLME 106 PD I+ +KDA L+G GGAGF T KWS +Y++CN +E EPGT+KDR L+ Sbjct: 44 PDAIIETLKDADLRGMGGAGFPTWRKWSAAAASPCD-EKYVVCNGNEDEPGTFKDRHLLR 102 Query: 107 QLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFD 166 PH ++EG LI+A A+KA R ++ E +R A+ E T + LL G Sbjct: 103 WTPHQVIEGALIAAVAVKANRVVFYVNPHQAEGIDQMRWAVDEWTASDLLASVSKVVGRP 162 Query: 167 FELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVP 226 L V +GRYI GEETA+++ L+G PR KPPFP SG G PT +NN ETL NVP Sbjct: 163 VTLTVAPSSGRYIGGEETAIVSWLDGGFPFPRRKPPFPFESGVGGLPTLINNTETLANVP 222 Query: 227 AILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLK 286 IL NG +WY+++ AGTKL SG V NPGL+ELP GT+ E++ + GGM DG Sbjct: 223 HILKNGADWYRDLGVGAAAGTKLFSLSGDVLNPGLYELPMGTSLEELVFVHGGGMLDGRA 282 Query: 287 FKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFF 346 FKA GG LT LD+ ++F+S+ + SRLGT + + ++V V FF Sbjct: 283 FKAVFTGGPSNTLLTARDLDVALDFDSVKRRKSRLGTGAMIVISEGTSIVRKVAEYVAFF 342 Query: 347 ARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVE 406 A SCG C C+ G ++L + G G D + L+ LCR + PG CA GAV Sbjct: 343 ASGSCGQCPSCKCGTFQMARLLDRIATGRGVEADRQALDHLCR-ILPGSGRCALIDGAVT 401 Query: 407 PLQSAIKYFREEFE 420 ++S+ F +E+E Sbjct: 402 VVESSRHTFPDEYE 415 >UniRef50_D2PS76 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PS76_9ACTO Length = 565 Score = 362 bits (928), Expect = 2e-98, Method: Composition-based stats. Identities = 154/408 (37%), Positives = 225/408 (55%), Gaps = 16/408 (3%) Query: 19 DDKQPVWLDEYRSKNG------------YEGARKALT-GLSPDEIVNQVKDAGLKGRGGA 65 D+ + Y G Y R L+ LS DE++ ++DAGL+G GGA Sbjct: 145 GDRDLGAVAAYVPDGGWPNDPYASGEHHYRSLRALLSGQLSADEVITALQDAGLRGMGGA 204 Query: 66 GFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKA 125 GF TG KW L+ E ++Y +CNADE EPGT+KDR L+ + PHL++EG+L+ A Sbjct: 205 GFPTGKKWELVRAAEG-AVKYAICNADESEPGTFKDRQLLAEQPHLVLEGLLMGMLVTGA 263 Query: 126 YRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETA 185 G++F+R EY L I E GL+G +++GTG L + T G YI GEETA Sbjct: 264 EEGWVFIRHEYGPEEAVLHSEIGRLREQGLIGPDVLGTGRRLMLDIFTSPGGYILGEETA 323 Query: 186 LINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDA 245 L+ +EG R PR+KPPFP G WGKPT +N+VET +VPAI+A G +W+ + Sbjct: 324 LLECMEGHRGEPRNKPPFPGNYGLWGKPTLMNSVETFADVPAIVARGADWWNAQGVNGAT 383 Query: 246 GTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHL 305 G K SG V+ PG++ +P GTT R++++ AGG+ G + +A QPGGA ++FL HL Sbjct: 384 GLKFFAVSGHVERPGVYCVPMGTTIRDLID-VAGGVAGGAELEAVQPGGASSNFLGPEHL 442 Query: 306 DLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSV 365 D+P++F ++ +AGS LG+ + + + ++ N+ FF ESCG C PCR G + Sbjct: 443 DVPLDFGTLAEAGSMLGSGAMVVMAAGTDALAAATNVLRFFRNESCGKCVPCRVGSTKAH 502 Query: 366 KILRALERGEGQPGDIETLEQLCRFLGPG-KTFCAHAPGAVEPLQSAI 412 +L R G+ + L L + C A+ P+ S + Sbjct: 503 DLLTDTLRSGGELDEARKARLLELELVLRKSSICGLGQVALGPVVSVL 550 >UniRef50_P22317 NAD-reducing hydrogenase hoxS subunit alpha n=5 Tax=Bacteria RepID=HOXF_RALEH Length = 602 Score = 360 bits (923), Expect = 8e-98, Method: Composition-based stats. Identities = 133/387 (34%), Positives = 211/387 (54%), Gaps = 15/387 (3%) Query: 45 LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLL 104 L P++++ + D+ L+GRGGAGFSTGLKW L ES +Y++CNADE EPGT+KDR+L Sbjct: 203 LKPEQVIETIVDSRLRGRGGAGFSTGLKWRLCRDAESEQ-KYVICNADEGEPGTFKDRVL 261 Query: 105 MEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGT- 163 + + P + GM+I+A+A+ +G ++LRGEY L R + E E GLLG+ I G Sbjct: 262 LTRAPKKVFVGMVIAAYAIGCRKGIVYLRGEYFYLKDYLERQLQELREDGLLGRAIGGRA 321 Query: 164 GFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLC 223 GFDF++ + GAG YICG+E+ALI S EG+R PR KPPFP G GKPT VNNVET Sbjct: 322 GFDFDIRIQMGAGAYICGDESALIESCEGKRGTPRVKPPFPVQQGYLGKPTSVNNVETFA 381 Query: 224 NVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRD 283 V I+ G +W++ + AGT+L+ +G PG++E+ +G T E+L Sbjct: 382 AVSRIMEEGADWFRAMGTPDSAGTRLLSVAGDCSKPGIYEVEWGVTLNEVLAMVGA---- 437 Query: 284 GLKFKAWQPGGAGTDFL-TEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNL 342 +A Q G + + + + +E + G+ + + +++ +VR+ Sbjct: 438 -RDARAVQISGPSGECVSVAKDGERKLAYEDLSCNGAF------TIFNCKRDLLEIVRDH 490 Query: 343 EEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAP 402 +FF ESCG C PCR G + + + G+ D++ + + + C Sbjct: 491 MQFFVEESCGICVPCRAGNVDLHRKVEWVIAGKACQKDLDDMVSWGALVRR-TSRCGLGA 549 Query: 403 GAVEPLQSAIKYFREEFEAGIKQPFSN 429 + +P+ + ++ F E ++ + + Sbjct: 550 TSPKPILTTLEKFPEIYQNKLVRHEGP 576 >UniRef50_UPI0000384AE3 COG1894: NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000384AE3 Length = 514 Score = 357 bits (916), Expect = 5e-97, Method: Composition-based stats. Identities = 137/374 (36%), Positives = 200/374 (53%), Gaps = 23/374 (6%) Query: 44 GLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRL 103 L DE++ +++ AGL+G GGAGF T KW + R ++ NADE EPGT+KDR Sbjct: 161 ELPRDEVLAELERAGLRGMGGAGFPTARKWRAVAA--RPGPRLVVVNADEGEPGTFKDRW 218 Query: 104 LMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGT 163 ++ ++EG LI+A+A++A Y++LR EY + LL I Sbjct: 219 FLQTNAARVLEGALIAAWAVEADEVYLYLRDEYADLHK-------------LLTVLIRAL 265 Query: 164 GFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLC 223 + + GAG Y+CGEE+ALI SLEG+R PR +PP+ A G +G+PT VNNVETL Sbjct: 266 PGSVPVHLRRGAGAYVCGEESALIESLEGKRGLPRQRPPYVAEVGLFGRPTVVNNVETLY 325 Query: 224 NVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRD 283 V ILA G E + + ++ G + SGRV+ PG+ P G T E++E++ GGM D Sbjct: 326 WVSRILAEGAELFTDEGRNGHRGLRTYSVSGRVRLPGVKIAPNGITITELIEEFCGGMED 385 Query: 284 GLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLE 343 G + +A+ PGGA FL H+ P+ F +I + G +G+A + E ++ + NL Sbjct: 386 GHQLRAYLPGGASGGFLPA-HVTPPLAFGAIEEHGGFIGSAAVVVFSQEDDLRAHALNLA 444 Query: 344 EFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPG 403 FFA ESCG CTPCR G + +L D + L L + + + C Sbjct: 445 RFFAHESCGQCTPCRVGTAKAADLL------ASPRWDEDLLNDLAQVMRDA-SICGLGQA 497 Query: 404 AVEPLQSAIKYFRE 417 A QS +++F E Sbjct: 498 APNVWQSLLRHFPE 511 >UniRef50_B1CAU2 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CAU2_9FIRM Length = 416 Score = 355 bits (911), Expect = 2e-96, Method: Composition-based stats. Identities = 139/412 (33%), Positives = 228/412 (55%), Gaps = 4/412 (0%) Query: 15 WRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWS 74 + +DEY + G++G +K++ ++ V V D+GL+GRGGA + TG K + Sbjct: 8 TKDYGTYDGFNIDEYIKRGGFKGLKKSILQ-GYEKTVKDVSDSGLQGRGGANYPTGRKLT 66 Query: 75 LMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRG 134 + + RY+LCNADE EPGT+KD+ L++ + ++EG++ISAF A +GYI++R Sbjct: 67 QAREAKGNGDRYILCNADEGEPGTFKDKYLLQNGIYKVIEGIIISAFCAGANKGYIYVRE 126 Query: 135 EYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRR 194 EY ++ AI + + G LG++I+ +GFDF+L + +G G Y+CGE A+ S+EG+ Sbjct: 127 EYTFMHKDIEFAIKQVYDKGFLGEDILSSGFDFDLSLFSGGGSYVCGEGFAMCESIEGKS 186 Query: 195 ANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSG 254 PRSKPP+ G KPT V NVET+ + ++ NG + GTK++ SG Sbjct: 187 GRPRSKPPYVKECGLHNKPTLVINVETVSVIATMMQNGFKTVLKYGVEDCPGTKMVCVSG 246 Query: 255 RVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESI 314 +VK+PG++E+ FGTT + I AGG++ G K K Q GGA + L++P + + Sbjct: 247 KVKHPGVYEVEFGTTVQNI-IKIAGGIKGGKKAKFVQIGGASGVIVPYEKLNIPYTYSGM 305 Query: 315 GKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERG 374 K +G+ + D + +++ + +E+FF E CG C PCR+G KI+ + Sbjct: 306 KKVKGNIGSGAIVVADEDDSVIDYLSVVEDFFFHECCGKCVPCREGNRQLKKIMDRFKIK 365 Query: 375 EGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQP 426 +G D++ ++ L + C + P SA F +EF+ +K+ Sbjct: 366 QGTLTDLKNYVRIVNAL--DASLCGSGKAQIIPFISAYTNFSQEFKNALKRE 415 >UniRef50_D1C1S2 NADH dehydrogenase (Quinone) n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C1S2_SPHTD Length = 442 Score = 353 bits (905), Expect = 9e-96, Method: Composition-based stats. Identities = 132/431 (30%), Positives = 193/431 (44%), Gaps = 20/431 (4%) Query: 6 RTPETHPLTWRLR----DDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKG 61 R HP+ R + L EYR++ GY A SP+E+ N + +GL+G Sbjct: 8 RATLHHPVGETHRLLIPGVTRRESLMEYRAQGGYAPEGWAW---SPEELRNLIAASGLRG 64 Query: 62 RGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAF 121 RGGA F TG KW + R +L NA E EP + KDR L+ + PHL++EG L++A Sbjct: 65 RGGAAFPTGRKWHGVAAQ--PAPRVVLVNAAESEPASAKDRTLLLRRPHLVLEGALLAAR 122 Query: 122 ALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICG 181 A+ A ++L E +L A+ E G+ + + T Y+ G Sbjct: 123 AIDAREIVLYLHATATEVRASLELALRELRADGVQTPHF---------RIVTAPPGYVAG 173 Query: 182 EETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISK 241 E +A + G A P KPP P+ G +PT V NVETL NVP I +G W + + Sbjct: 174 ESSAAVRRANGGPAKPTFKPPRPSERGVGKRPTLVQNVETLGNVPLIARHGANWLREVGA 233 Query: 242 SKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLT 301 GT L+ SG V PG++E+P G R I+E+ GG+ G +A GG +L Sbjct: 234 PNLPGTLLVTLSGAVNRPGVYEVPSGVPLRHIVEELGGGVIGGASIQAMLVGGYFAGWLG 293 Query: 302 EAHLD--LPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRD 359 L+ +E ES+ G LG + V + I ++ L FFA ES C C Sbjct: 294 PDALEQGARLEPESLRAWGVSLGAGAIVVVPNWICGLAQAAWLMRFFADESAQQCGTCLY 353 Query: 360 GLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEF 419 G + L RG P + + L + PG+ C H GA ++A++ F ++ Sbjct: 354 GTRAMADVFARLLRGTASPSERDRLHLWAERMLPGRGACGHLDGAAIAARTALEVFADDI 413 Query: 420 EAGIKQPFSNT 430 Sbjct: 414 RRHALGGGCGR 424 >UniRef50_A2DV30 Respiratory-chain NADH dehydrogenase 51 Kd subunit family protein n=1 Tax=Trichomonas vaginalis RepID=A2DV30_TRIVA Length = 425 Score = 352 bits (904), Expect = 1e-95, Method: Composition-based stats. Identities = 128/411 (31%), Positives = 216/411 (52%), Gaps = 7/411 (1%) Query: 15 WRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWS 74 + + L + + +K + I+++V+ + L+GR GAG T KW Sbjct: 18 FTNINGVDESDLQSCMKRGDWNDTQKIIAN-GKKYILDEVRKSELRGRSGAGLLTYKKWE 76 Query: 75 LMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRG 134 + + + YL N +E EPGT KDR +++ P ++EG ++++AL +R Y+++RG Sbjct: 77 EILTSKQLP-HYLCINGNESEPGTCKDRQILQNEPQKIIEGAFLASYALDVHRCYVYVRG 135 Query: 135 EYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRR 194 Y + A L+ AI EA +A L+GKN G+DFE+ VH GAG Y+CGE+T L+ SLEG Sbjct: 136 HYTKEAKRLQLAIDEAKKANLIGKNNKF-GWDFEINVHPGAGAYVCGEQTGLMTSLEGNP 194 Query: 195 ANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSG 254 PR KPP P G + PT V+NVET+ + +I G +W+ ++ G K+ SG Sbjct: 195 GTPRQKPPQPFEKGLFQCPTVVDNVETISTISSICRRGGKWFSSLGIPGSRGPKIYQISG 254 Query: 255 RVKNPGLWELPFGTTAREILEDYAGGMRDGLK-FKAWQPGGAGTDFLTEAHL-DLPMEFE 312 V P + E G + +E+++ + G+R G + PGG +T+ + + F+ Sbjct: 255 HVNRPCIVEETLGMSLKELIDVHGSGVRGGWDNLQCIIPGGTSCPPITKEQAKNAILGFD 314 Query: 313 SIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALE 372 + K GS LGT + +D+ ++V + R + F+ E CG C C +G +I + Sbjct: 315 EMSKIGSGLGTGSLVVIDNTADIVEVYRRIANFYKDECCGQCKQCVEGTETMAEIFDKIA 374 Query: 373 RGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGI 423 RG+G D++ LE++ + K C+ + GA +P++ +K F+ + Sbjct: 375 RGKGTKDDVKHLEEVAFGMK--KYICSFSVGASDPIRGFLKVFKNKLLERC 423 >UniRef50_O94500 NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial n=1 Tax=Schizosaccharomyces pombe RepID=NDUV1_SCHPO Length = 452 Score = 339 bits (869), Expect = 1e-91, Method: Composition-based stats. Identities = 128/406 (31%), Positives = 209/406 (51%), Gaps = 8/406 (1%) Query: 21 KQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPK-- 78 K+ +D+ + YE + L P I+ V+++ L+GRG GF TG K + K Sbjct: 41 KRIRRIDDALADGEYENLSEILK-YDPLNIIELVQESELRGRGRYGFPTGEKMLSLYKAT 99 Query: 79 ---DESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGE 135 ++ NA E + G++KDRLL+ PH ++EG +I+A A++A Y+F+R + Sbjct: 100 SSERGRKEKPVVIVNAAENDIGSFKDRLLLRHEPHKIIEGAIIAARAVEASACYLFIRKD 159 Query: 136 YIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRA 195 Y E V +++ I +A LLGKN++GT EL +H GAG YI GEE+ALI SL+G Sbjct: 160 YYEETVMMQKCIIQAYAKKLLGKNLLGTSIGLELLIHPGAGSYITGEESALIQSLQGEFP 219 Query: 196 NPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR 255 P TSG +G PT V NVET+ N+PAI+ G +++ ++ + + GTKL SG Sbjct: 220 VPDIPINNTITSGLFGLPTLVLNVETVSNLPAIIKKGPKFFISMGRPNNRGTKLFSISGE 279 Query: 256 VKNPGLWELPFGTTAREILEDYAGGMRDGL-KFKAWQPGGAGTDFLTEAHLD-LPMEFES 313 V P + E ++++E+YAGG+R G K PGG + L + + + M+F+S Sbjct: 280 VNEPNVIEACMSIPLKDLIENYAGGVRGGWNKLVGIFPGGPCSGILNKNQCEQVTMDFDS 339 Query: 314 IGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALER 373 + S LGT + ++ + + N +F++ +C C CRDG+ ++ L+ L+ Sbjct: 340 LKALDSSLGTGSVIVLNDHDQIFESLLNFAKFYSTNTCHTCPVCRDGVEDVIETLKGLKD 399 Query: 374 GEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEF 419 G ++ + K FC + S + F ++ Sbjct: 400 GHAHLSQLKDMFSKFNMPSSSKVFCGFGDSMRHQIHSIQRNFPDQI 445 >UniRef50_B2UIT6 NADH dehydrogenase (Quinone) n=6 Tax=Betaproteobacteria RepID=B2UIT6_RALPJ Length = 525 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 139/422 (32%), Positives = 205/422 (48%), Gaps = 18/422 (4%) Query: 3 NIIRTPETHP---LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGL 59 +I H + L YR KA ++P +VN V + L Sbjct: 116 DIRPHVGEHASRAVLLGNVLRGGVRDLPTYRRGG--AALEKA-RRMAPQALVNMVAASRL 172 Query: 60 KGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLIS 119 +GRGGA F G+KW + +Y++ NADE +PG + DR L+E+ P L+E I+ Sbjct: 173 RGRGGAAFPAGIKWQAV-ASACAETKYVVVNADEGDPGAFSDRFLLEEDPFRLIEATAIA 231 Query: 120 AFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYI 179 A A+ A RGYI++R EY +A + A+ +A AG LG EL + G G YI Sbjct: 232 AHAVGARRGYIYIRKEYPDAVRVMSHALEQARVAGWLGP-------TLELELVVGQGAYI 284 Query: 180 CGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNI 239 CGEET+L+N+LEGRR R +PP + G +G PT V+NVETLC +P I+ +G Y + Sbjct: 285 CGEETSLLNALEGRRPEVRPRPPQISECGLFGAPTLVHNVETLCAIPWIVTHGAAAYAAL 344 Query: 240 SKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDF 299 S GTKL+ + + PGL+E+ FG + +++E G+R G K GG Sbjct: 345 GFSNSRGTKLLSLNSLFRRPGLYEVEFGISLADVVEQLGQGLRRG-KLNGLMVGGPLAGI 403 Query: 300 LTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRD 359 + LD + +E + +G +A + ++ +V + F ARESCG CTPC Sbjct: 404 VPPTLLDTRLGYEEMQTIDCAVGHGGVIAFADDTSIPRIVAQVLRFGARESCGKCTPCHL 463 Query: 360 GLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEF 419 G P A P D + +L L + C H G E +QS +++ E Sbjct: 464 GTPILAA--MADAAANRLPVDADRFRRLIDAL-AATSLCGHGRGLAEFVQSVRRHYPSEL 520 Query: 420 EA 421 +A Sbjct: 521 QA 522 >UniRef50_Q293C9 GA20825 n=4 Tax=Drosophila RepID=Q293C9_DROPS Length = 445 Score = 331 bits (848), Expect = 4e-89, Method: Composition-based stats. Identities = 126/418 (30%), Positives = 197/418 (47%), Gaps = 31/418 (7%) Query: 19 DDKQPVWLDEYRSKN---------GYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFST 69 D V+ + Y + G L D I+ Q Sbjct: 44 HDCDRVFQNLYGRHDWRLKGACKRGDWYHTAVLLEKGSDWIMEQ---------------- 87 Query: 70 GLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGY 129 W+ + ES + L+ N E EPGT KDR ++ PH ++EG L++ FA+ R Sbjct: 88 ---WNFLRCAESKQDKVLVMNCAEGEPGTCKDREIIRHEPHKIIEGCLLAGFAMGCNRAI 144 Query: 130 IFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINS 189 I++R + A NL+ A+AEA GLLG + TG F++ V G RY+CGEETAL+ Sbjct: 145 IYVRNRFYNEACNLQFALAEAYRYGLLGPSACDTGIKFDILVQRG-DRYLCGEETALVKC 203 Query: 190 LEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKL 249 L G+ PR +PPF G + P V N E++ +P IL G W+ ++ +S ++GTKL Sbjct: 204 LMGKIGRPRRRPPFLTEQGYFSHPCVVINAESIAVLPTILRRGASWWADLGRSYNSGTKL 263 Query: 250 MGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLK-FKAWQPGGAGTDFLTEAHL-DL 307 SG+V +P E R+++E +AGG+R G A PGG T + + ++ Sbjct: 264 FNISGQVNSPCTVEEEMSMPMRDLIEKHAGGVRGGWDNLLAIFPGGLSTPLINKQVAGEV 323 Query: 308 PMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKI 367 M+FE + AGS G+ + V+ + + + ++ +F+ + +C CT CRDG W ++ Sbjct: 324 LMDFECLEAAGSSFGSGALIVVNKQSDPLQVMLRSIQFYEKHTCKQCTYCRDGAIWLPEL 383 Query: 368 LRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 +GE P +I+ + + + C A G V S + FR E I Q Sbjct: 384 FDRFVKGEAHPHEIDWTLAIGKKIKDSNPICGLAQGQVNVAVSLVDNFRPYIEDRILQ 441 >UniRef50_A0K164 NADH dehydrogenase (Quinone) n=2 Tax=Actinomycetales RepID=A0K164_ARTS2 Length = 566 Score = 326 bits (835), Expect = 1e-87, Method: Composition-based stats. Identities = 151/416 (36%), Positives = 220/416 (52%), Gaps = 14/416 (3%) Query: 4 IIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALT-GLSPDEIVNQVKDAGLKGR 62 + +P T P D PV + + +P++I+ +V+ A L+GR Sbjct: 154 LGSSPRTDPPIPVYNDSPVPVVTAGLLGASPPWSVWPDVAASATPEDILLRVEAAQLRGR 213 Query: 63 GGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFA 122 GGAGF KW + R ++ N DE +PG+Y DRLLMEQ H ++EG++++ FA Sbjct: 214 GGAGFRAAAKWR--AALDHPAPRVVVANGDEGDPGSYADRLLMEQDAHRVLEGLVLACFA 271 Query: 123 LKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGE 182 + A G +F+R EY AA LR A+ EA AG LG +I G+GF E+ V GAG Y+ GE Sbjct: 272 VGATTGIVFVRSEYPLAAARLRNALHEARRAGHLGPDIAGSGFSLEVRVAEGAGSYVSGE 331 Query: 183 ETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKS 242 ETAL+N L G R R +PPFP G G+PT VNNVETLC VP I+ +G Y + S Sbjct: 332 ETALLNGLAGLRGVVRPRPPFPTERGFHGRPTVVNNVETLCAVPWIVQHGGPAYAALGTS 391 Query: 243 KDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTE 302 +AGT + S R PG +E+ GT R I+E+ GG+R G +A Q GG FL Sbjct: 392 DEAGTVIACLSERFLRPGAYEVEIGTPVRRIVEELGGGLRGGATLRAIQIGGPLGGFLGP 451 Query: 303 AHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGL- 361 LD+P+ ++ + G+ LG A +A D ++ ++RNL +F A ESCG C+PCR G Sbjct: 452 DDLDVPLSDTALARHGAALGHAGIVAFDDRLSGEQVLRNLWDFAAAESCGQCSPCRVGTW 511 Query: 362 --PWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYF 415 ++ A + G + + T+ + CA ++S ++ + Sbjct: 512 RGRALAELPDAPDVGSERGDVLRTM--------AAGSLCAFGRRVPAAVRSLVRVY 559 >UniRef50_Q1PZQ6 Similar to NADH dehydrogenase I chain F (1st module) EC: 1.6.5.3 n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZQ6_9BACT Length = 675 Score = 321 bits (824), Expect = 2e-86, Method: Composition-based stats. Identities = 130/432 (30%), Positives = 207/432 (47%), Gaps = 25/432 (5%) Query: 8 PETHPLTWRLRDDKQPV---WLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGG 64 P T P + +EY G KA +SP++IV ++ +GL+GRGG Sbjct: 219 PLTTPTGLKTHWLIPSEPFLSYEEYLCATGENAVHKA-RAMSPEQIVTELLASGLRGRGG 277 Query: 65 AGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALK 124 AGF TG+KW + + RY++CNA E EPGT+KDR L+ + P+ +EGMLI+A A+ Sbjct: 278 AGFPTGVKWRTLVRHT-CPTRYVVCNAAEGEPGTFKDRYLLRKNPYATIEGMLIAAHAVN 336 Query: 125 AYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEET 184 A YI L+ + + +R+AI+E GL+ E+ + G Y+ GEE Sbjct: 337 AAGIYIALKRSFGPSIERVRQAISEMASKGLMD--------GIEIKIVEGPEEYLFGEEK 388 Query: 185 ALINSLEGRRANPRSKPPFPATSGAWG-----KPTCVNNVETLCNVPAILANGVEWYQNI 239 AL+N +EG PR P G + P ++N +TL +VP+I+ +G ++ + Sbjct: 389 ALLNVVEGFPPMPREAYCPPYEIGLFATPNSPNPALLDNAQTLAHVPSIVRHGGASFRRL 448 Query: 240 SKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDF 299 +GT + G V+ PG++E G T R++ D AGG G +FK G A Sbjct: 449 GTHDTSGTLIFTVCGDVQRPGVYECEAGITLRKLFYDVAGGPHTGRQFKVALSGVACGVI 508 Query: 300 LTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRD 359 L D P EF++ GS LG+A + +D+ ++ + + + F ESC C C+ Sbjct: 509 L-ADRFDTPTEFDAFQMIGSGLGSAGFIVLDNAASIPRVTQAVARFLYVESCNQCPACKA 567 Query: 360 GLPW----SVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYF 415 GL ++L+ L + + G ++ + + P C + + ++ F Sbjct: 568 GLRTASHGIDELLQHLHLHDDRAG-LDWIME-GAHSAPQANRCFLPAQGAKLIPGLVQSF 625 Query: 416 REEFEAGIKQPF 427 REEFE K Sbjct: 626 REEFEPYAKGKR 637 >UniRef50_A1TZ63 Electron transport complex, RnfABCDGE type, C subunit n=9 Tax=Gammaproteobacteria RepID=A1TZ63_MARAV Length = 609 Score = 308 bits (790), Expect = 2e-82, Method: Composition-based stats. Identities = 78/427 (18%), Positives = 139/427 (32%), Gaps = 78/427 (18%) Query: 1 MKNIIRTPETHPLTWR-----LRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVK 55 ++ I + P HP L+ D + W L + ++ +++ Sbjct: 81 IEAIEQRPVPHPSGMADWCVVLKPDGEDQWCAL--------SPIDDYKQLDREAVLQRIR 132 Query: 56 DAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEG 115 +AG+ G GGAGF T +K + L+ N E EP D + M + +V G Sbjct: 133 EAGISGMGGAGFPTDIKLRPPR---DRKVDTLILNGAECEPYITADDMTMREQAAEVVAG 189 Query: 116 MLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGA 175 + + A+ L+ R + + EA +R+A+A ++ + Sbjct: 190 LKVMAWILRPSRCVVGIEDNKPEAIAAMRKAVA-----------------GTQIEIAVVP 232 Query: 176 GRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEW 235 +Y G E LI L G+ P N+ T V + G Sbjct: 233 TKYPSGGEKQLIQILTGQEVPSGGIPA--------DIGVMCQNIGTAVAVGRAVFEG--- 281 Query: 236 YQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGG 294 K ++++ +G V+ PG +E+ GT +LE + + GG Sbjct: 282 -------KPLISRVVTVTGEAVREPGNFEVLIGTPIHHLLETAG---MAQERLERLILGG 331 Query: 295 AGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSL-VRNLEEFFARESCGW 353 G L T V +++ L + C Sbjct: 332 PMM--------------------GYTLTTDSVPVVKTTNCVIAATAAELPAPPPEQPCIR 371 Query: 354 CTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIK 413 C C + P ++L + G+ E E L F C++ + PL + Sbjct: 372 CGQCAEACPM--ELLPQQLFWYSKAGEFEKAEHLNLFDCIECGACSYVCPSSIPLVQYYR 429 Query: 414 YFREEFE 420 + + E Sbjct: 430 FAKGEIR 436 >UniRef50_Q1ZEG2 Electron transport complex protein RnfC n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZEG2_9GAMM Length = 839 Score = 308 bits (789), Expect = 3e-82, Method: Composition-based stats. Identities = 82/455 (18%), Positives = 146/455 (32%), Gaps = 80/455 (17%) Query: 1 MKNIIRTPETHPL-TWRLRDDKQPVWLDEYRSKNGYEGARKALT--GLSPDEIVNQVKDA 57 + I + P+ HP L + LD Y K L S ++++++ A Sbjct: 97 VVAIEKHPDLHPSGLSSLSVIIKTDALDRYI------NIEKPLPYWQQSSHFLIDEIQKA 150 Query: 58 GLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGML 117 G+ G GGAGF T LK + LL NA E EP D LM++ + ++ G+ Sbjct: 151 GIVGLGGAGFPTHLKL-----KGHEATQLLLINAAECEPYISADDRLMQEHANEIIAGIN 205 Query: 118 ISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGR 177 + L I + +A L A+ + + Sbjct: 206 VLQHILNPKLTIIAIEDNKPQAIEALTEALNTTKNH---------------IIIRKIPTL 250 Query: 178 YICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQ 237 Y G E LI + G++ P + N+ T+ + L +G Sbjct: 251 YPSGSEKQLIEIITGKQ--------TPIGRHPTDLGIVMQNIGTVFAIKEALIDG----- 297 Query: 238 NISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAG 296 K ++++ +G + G + GT + +L+ Y K GG Sbjct: 298 -----KPLTSRIVTLTGDAIAKKGNVSVRIGTPIQYLLDKYHFNPSADQK---VIIGGPM 349 Query: 297 TDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTP 356 F T L P+ + + ++ + E ++C C+ Sbjct: 350 MGF-TIQDLQSPITKKC------------------NCILAPTIQEMPEAEQEQACIRCSY 390 Query: 357 CRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFR 416 C D P V+++ + D + LE CA + PL + + Sbjct: 391 CADACP--VELMPQQLLWYAKNQDHKKLEAYNLSSCIECGICAFVCPSTIPLVDYYRIAK 448 Query: 417 EEF--------EAGIKQPFSNTHLINGIQPNLLKE 443 E +A I + IQ + ++ Sbjct: 449 AEIHTAKKESQQADIARQRHEKREARLIQSKIDRQ 483 >UniRef50_Q15RL3 Electron transport complex, RnfABCDGE type, C subunit n=3 Tax=Alteromonadales RepID=Q15RL3_PSEA6 Length = 890 Score = 303 bits (775), Expect = 1e-80, Method: Composition-based stats. Identities = 76/449 (16%), Positives = 142/449 (31%), Gaps = 75/449 (16%) Query: 1 MKNIIRTPETHPLTW-RLRDDKQPVWLDEY---RSKNGYEGARKALTGLSPDEIVNQVKD 56 + +I HP +P LD++ Y+ K ++ + + Sbjct: 98 VVSIGPHISAHPSALPEQTLIIEPDNLDKWAILSPLQDYQSLPKV-------TVLEAICN 150 Query: 57 AGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGM 116 AG+ G GGAGF T +K ++ +++ N E EP D LM + + +G+ Sbjct: 151 AGISGMGGAGFPTHIK-----AAPKKDVEFIIINGVECEPYITSDDRLMREHAWQIRQGI 205 Query: 117 LISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAG 176 + L + YI + EA +R A ++ + V A Sbjct: 206 DVLCHLLSPKQVYIAIEDNKPEAIEAMRVACQQSEQY----------------KVVPIAT 249 Query: 177 RYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWY 236 +Y G E LI + R P ++NV T + + +G Sbjct: 250 KYPAGGEKQLIQVITNREV--------PKQGLPIDVGVIMHNVGTCFAIADAIFSG---- 297 Query: 237 QNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGA 295 K +++ +G+ V+ P G+ +L AG + K GG Sbjct: 298 ------KPLIQRVVTITGKAVETPKNVWALIGSPVAHLL-SSAGYVAHRQAQKHIIMGGP 350 Query: 296 GTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCT 355 F + +P+ + ++ + E A + C C+ Sbjct: 351 MMGFTVASD-QVPVVKIT------------------NCLLLPTSDEMAEPEAEQPCIRCS 391 Query: 356 PCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYF 415 C D P V +L + +++ + F CA+ + PL + Sbjct: 392 ACADACP--VSLLPQQLFWHSKAKELDKAQDYNLFDCIECGACAYVCPSEIPLVHYYRVA 449 Query: 416 REEFEAGIKQPFSNTHLINGIQPNLLKER 444 + E ++Q + R Sbjct: 450 KAEI--RVEQEEKQKSDKARERFESRAAR 476 >UniRef50_Q1N6T4 Electron transport complex protein RnfC n=1 Tax=Bermanella marisrubri RepID=Q1N6T4_9GAMM Length = 727 Score = 302 bits (774), Expect = 1e-80, Method: Composition-based stats. Identities = 84/433 (19%), Positives = 138/433 (31%), Gaps = 74/433 (17%) Query: 1 MKNIIRTPETHP-----LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVK 55 +K I HP L + D + W++ ++G L D +++ ++ Sbjct: 85 IKAIEERVIAHPSGMGDLCIIIETDGKDTWIE-------HKGLDNPLET-DRDTLIDIIQ 136 Query: 56 DAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEG 115 +G+ G GGA F T +K I L+ NA E EP D +LM LV+G Sbjct: 137 QSGITGLGGASFPTHVK----TCVPEERIDTLILNAAECEPYITADDMLMRSYADGLVKG 192 Query: 116 MLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGA 175 + + + + I + EA L++A+ T ++ V T Sbjct: 193 IELLFHLYQPEKCLIGIEDNKPEAIEALQKALD------------ATTDDTHKIHVVTIP 240 Query: 176 GRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEW 235 +Y G E LI L G+ PA NV T + Sbjct: 241 TKYPSGGEKQLIQILTGKEV--------PANGLPADIGVACQNVGTAYAI---------- 282 Query: 236 YQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGG 294 Y+ I K ++ +G N +E GT +LE G D K GG Sbjct: 283 YEAIYLGKPLIKRITTVTGEAANNKANFETLLGTPVHHLLEQ---GETDFDKVHRLIMGG 339 Query: 295 AGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVS-LVRNLEEFFARESCGW 353 F L T V +++ L + + C Sbjct: 340 PMMGFT--------------------LQTDEVPVVKSTNCIIASTANELPDPAMEQPCIR 379 Query: 354 CTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIK 413 C C + P ++L + ++E EQ CA+ + PL + Sbjct: 380 CGMCTEACPA--QLLPQQLYWFSKSSNLEQAEQHNIADCIECGACAYVCPSNIPLVQYYR 437 Query: 414 YFREEFEAGIKQP 426 + + E + Sbjct: 438 HTKGEIKQAQADK 450 >UniRef50_UPI00016C4299 NADH dehydrogenase (quinone) n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4299 Length = 686 Score = 301 bits (770), Expect = 4e-80, Method: Composition-based stats. Identities = 132/506 (26%), Positives = 210/506 (41%), Gaps = 92/506 (18%) Query: 1 MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGY--------EGARKALTGLSPDEI-- 50 + P W L + W +YR+ + L ++ Sbjct: 174 VIADPEHPAPRTAGWSLDIYGRQGWPRDYRAVKRFTDYLARLIRPLVPPPRELGGKDLET 233 Query: 51 --------VNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDR 102 + ++K A L G GGAG KW + + N +Y++CN DE EPGT+KDR Sbjct: 234 YVQRFHPLLWELKTANLLGMGGAGAPAYQKWLDV-WQQPGNEKYIVCNGDESEPGTFKDR 292 Query: 103 LLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMG 162 ++ ++PHL+VEG++++ A G+I++R EY E L+ I A E G G NI G Sbjct: 293 EILLRMPHLVVEGVILAGLMTGATSGHIYVRHEYFEQIHALKEEIKRAQELGACGPNIFG 352 Query: 163 TGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETL 222 +G +F + V G YICGE++ALI ++E RR PR++PP + +G KPT VNNVETL Sbjct: 353 SGRNFPVEVFESPGGYICGEQSALIEAMEDRRGQPRNRPPELSANGFRDKPTVVNNVETL 412 Query: 223 CNVPAILANGVEWYQNIS-------KSKDAGTKLMGFSGRVKNPGLWELPFGTTAREIL- 274 P I+ G + Y+ K K G +L SG V PG++E+ G T E+ Sbjct: 413 AWAPGIILFGGDKYEMGGWRLATDPKIKFGGRRLFSVSGDVARPGVYEVAIGLTLGELFN 472 Query: 275 -EDYAGGMRDGLKFKAWQPGGAGTDFLTE------------------------------- 302 + Y GG+ +A G + Sbjct: 473 GDKYCGGITGP--LRAVAASGPSGGLVPAKLPVDPKFDAKKRADAVARIRDRSAQDADFM 530 Query: 303 ---------------AHLDLPMEFESIG--------KAGSRLGTALAMAVDHEINMVSLV 339 L +P++ + LG A +++++ Sbjct: 531 EWFLNTHLPLGATELDVLKIPLDLNFFRHLNGALRLPVEAMLGAA-ITVYAGDVDVLDQA 589 Query: 340 RNLEEFFARESCGWCTPCRDGLPWSVKI----LRALERGEGQPGDIETLEQLCRFLGPG- 394 N +F+ ESCG C PCR G V+I L++ G D+ +++ + + Sbjct: 590 VNYTQFYRNESCGKCVPCRLGSQKLVQIGEGLLKSRRAGRLPADDLAAIKKDVKEITKTL 649 Query: 395 --KTFCAHAPGAVEPLQSAIKYFREE 418 + C A PL +A++YF ++ Sbjct: 650 QLTSICGLGYVAPIPLATALEYFVDD 675 >UniRef50_B0K144 Electron transport complex, RnfABCDGE type, C subunit n=11 Tax=Clostridia RepID=B0K144_THEPX Length = 443 Score = 300 bits (768), Expect = 7e-80, Method: Composition-based stats. Identities = 83/390 (21%), Positives = 135/390 (34%), Gaps = 62/390 (15%) Query: 38 ARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPG 97 + +L LSP EI+ +++AG+ G GGAGF T +K S I +L N E EP Sbjct: 115 PKGSLEDLSPKEIIEIIREAGITGMGGAGFPTHVKLSPP---SDKKIDTILVNGAECEPY 171 Query: 98 TYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLG 157 D LM + P +V G+ A+ RG I + +A + LR A + Sbjct: 172 LTTDHRLMVEYPEKIVFGLKAIMKAVGVERGIIGVEKNKPDAILALREASKDEK------ 225 Query: 158 KNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVN 217 + + T +Y G+E LIN++ GR P+ V Sbjct: 226 ----------NIQIATLKVKYPQGDEKRLINAILGRIV--------PSGGLPMDVGVIVV 267 Query: 218 NVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILED 276 N T V + G Y ++ +G +K P + GT ++++E Sbjct: 268 NAATTKAVADAILEGKPLY----------ERVTTITGHGIKQPKNLLVKIGTPLKDLIEQ 317 Query: 277 YAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMV 336 G D GG + + LD+P+ GT + + Sbjct: 318 CGGFTED--SPGKIISGGPMMG-IAQHSLDVPI----------IKGTGGILIL------- 357 Query: 337 SLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKT 396 + + C C C + P V +L + + E+ Sbjct: 358 --TKKEARPEQVQPCIKCGKCVEVCP--VNLLPLYISSYSLKKNFDKAEEYNALDCVECG 413 Query: 397 FCAHAPGAVEPLQSAIKYFREEFEAGIKQP 426 C++ A PL +I+ + E A K Sbjct: 414 SCSYICPAKRPLAESIRLAKREIIAKKKSK 443 >UniRef50_Q65U33 Electron transport complex protein rnfC n=29 Tax=Pasteurellaceae RepID=RNFC_MANSM Length = 723 Score = 299 bits (767), Expect = 1e-79, Method: Composition-based stats. Identities = 80/424 (18%), Positives = 140/424 (33%), Gaps = 79/424 (18%) Query: 1 MKNIIRTPETHPLTWR-----LRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVK 55 + I HP + D + W + + S ++++ ++ Sbjct: 90 VIAIAPHIAAHPSGLSELAVHIHADGKDQWRE--------QNPIDDFLSQSAEQLIEKIY 141 Query: 56 DAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEG 115 AG+ G GGA F T K ++ L+ N E EP D LM P ++EG Sbjct: 142 QAGIAGLGGAVFPTAAKIDSA----QKKVKLLIINGAECEPYITCDDRLMRDNPDEIIEG 197 Query: 116 MLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGA 175 + I + L+ + I + EA +++ A+ A ++ + Sbjct: 198 IRILRYILRPEKVVIAVEDNKPEAVQSIKNALQGAN----------------DIEIRVIP 241 Query: 176 GRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEW 235 +Y G LI L G PA + + NV T + + N Sbjct: 242 TKYPSGAAKQLIQILTGMEV--------PAGQRSSSIGVLMQNVGTAFAIKRAIIN---- 289 Query: 236 YQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGG 294 + +++ +G + N G + FGT +L++ G + + GG Sbjct: 290 ------DEPLIERVVTLTGDKIPNKGNQWVRFGTPISFLLKNV--GYQYDERL-PVFLGG 340 Query: 295 AGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWC 354 LT +LD P+ LG + + +SC C Sbjct: 341 PMMG-LTLPNLDAPITK---------LGNCILAP---------DHFEYDPQAREQSCIRC 381 Query: 355 TPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKY 414 + C D P + + + D E E+ CA+ + PL I+Y Sbjct: 382 SACSDACPVHL--MPQQLYWYARSEDHEKSEEYSLKDCIECGLCAYVCPSHIPL---IQY 436 Query: 415 FREE 418 FR+E Sbjct: 437 FRQE 440 >UniRef50_B5JW06 EleCtron transport complex, rnfabcdge type, c subunit n=2 Tax=Gammaproteobacteria RepID=B5JW06_9GAMM Length = 792 Score = 299 bits (767), Expect = 1e-79, Method: Composition-based stats. Identities = 77/442 (17%), Positives = 148/442 (33%), Gaps = 74/442 (16%) Query: 1 MKNIIRTPETHPLTWR-----LRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVK 55 ++ I P HP + D + W++ T L P + N+++ Sbjct: 69 IREIGPMPVPHPSGLTAPCLVIEPDGKDEWIEL--------KPVADYTQLDPISLRNRIR 120 Query: 56 DAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEG 115 +AG+ G GGA F + +K + P S I L+ N E EP D+ LM + +V+G Sbjct: 121 EAGIVGLGGAAFPSAVKLNPGP---SRKIHTLVINGAECEPYITCDQTLMSERADQVVQG 177 Query: 116 MLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGA 175 + I+ AL R +I + A L +AIA+ D ++ + Sbjct: 178 IQIAMHALGVERCWIAIEDSMPTAHEGLSQAIAQCG--------------DTKIEIKVVP 223 Query: 176 GRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEW 235 Y G E L+ L G+ P+ +N T+ + Sbjct: 224 TIYPTGGEKQLLKVLTGQEV--------PSNGLPSEIGVVCHNPGTIVAM---------- 265 Query: 236 YQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGG 294 Y+ I+ + ++++ +G+ + +P E FGT ++ + G + + GG Sbjct: 266 YRAIAFGEPLISRIVTITGQGIASPRNIEALFGTPIAHLVAEAGGYQKGVERL---IMGG 322 Query: 295 AGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVS-LVRNLEEFFARESCGW 353 F L T V +++ + + + C Sbjct: 323 PMMGFA--------------------LHTDELPIVKATNCILAGQAGEIADPGHADPCIR 362 Query: 354 CTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIK 413 C C D P + + + + + ++ F C++ + PL + Sbjct: 363 CGACADACPADLLPQQLYWYSKSREFERAQ-DEYNLFDCIECGCCSYVCPSHIPLVQYYR 421 Query: 414 YFREEFEAGIKQPFSNTHLING 435 + + E + H Sbjct: 422 FAKTEIRNAEVEKRKAEHAKER 443 >UniRef50_B6BWH5 Electron transport complex protein RnfC n=2 Tax=Betaproteobacteria RepID=B6BWH5_9PROT Length = 503 Score = 296 bits (759), Expect = 8e-79, Method: Composition-based stats. Identities = 77/429 (17%), Positives = 151/429 (35%), Gaps = 79/429 (18%) Query: 1 MKNIIRTPETHP-----LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVK 55 + I HP + + D + W+ R + LS + + ++K Sbjct: 84 VVAIESNKIPHPSGLPDICIAIETDGKDEWIKR---------NRIDPSNLSSEALYEKMK 134 Query: 56 DAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEG 115 +G+ G GGA F T +K + S I+ L+ NA E EP D + M++ +EG Sbjct: 135 SSGIVGLGGATFPTHIKLN------SNKIKTLIVNAAECEPYITCDDMAMQEKTKEFIEG 188 Query: 116 MLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGA 175 + I+ LK I + +A L+ + ++ + + Sbjct: 189 IQITMDILKIPHAIIGIEDNKPKAIEKLKTVLNKSK----------------NISIKVVP 232 Query: 176 GRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEW 235 Y G+E LI + G + + +P V NV TL ++ + Sbjct: 233 TVYPSGDEKRLIYLMLGLKISKEKRP--------VDFGIQVFNVATLISIGRFFYH---- 280 Query: 236 YQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGA 295 S+ ++++ +G +K P +E GT +E+++D G + GG Sbjct: 281 ------SEPVISRIVTVTGALKRPNNYEALIGTPIQELIKDAGG-----KSDQEIIMGGP 329 Query: 296 GTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCT 355 F H D+ + A++ + + +++ + F C CT Sbjct: 330 MMGFKLP-HTDVSVTK----------------AMNCLLAITDEMKSKDTF--EMPCIRCT 370 Query: 356 PCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYF 415 C + P ++ + + + + E F C++ + PL +Y Sbjct: 371 KCVEVCPAQLQPQELYWHAKSKQFE-KLTEDYKLFDCIECGCCSYVCPSNIPLVQYYRYA 429 Query: 416 REEFEAGIK 424 + E +K Sbjct: 430 KSEIRDQLK 438 >UniRef50_Q2SKU6 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC n=7 Tax=Proteobacteria RepID=Q2SKU6_HAHCH Length = 821 Score = 294 bits (753), Expect = 4e-78, Method: Composition-based stats. Identities = 82/450 (18%), Positives = 143/450 (31%), Gaps = 78/450 (17%) Query: 1 MKNIIRTPETHP-----LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVK 55 + + R P HP + + D + W ++ Y SP++++ +V+ Sbjct: 81 VTAVERRPVPHPSGLSDVCIVIETDGEDAWTHLTPCED-YRAL-------SPEQLLERVR 132 Query: 56 DAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEG 115 G+ G GGAGF T +K + + L+ NA E EP D +LM + ++ G Sbjct: 133 QGGIAGMGGAGFPTAIKLHPPR---NDKVNALILNAAECEPYITADDMLMRERADEVIRG 189 Query: 116 MLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGA 175 M I A L+ I + EA L++A + + V Sbjct: 190 MEIMAQLLEPEECLIGIEDNKPEAIAALQQAAS-----------------GTHIEVVVIP 232 Query: 176 GRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEW 235 +Y G E LI L G P NV T V + G Sbjct: 233 TKYPSGGEKQLIKILTGLEV--------PHGKIPADIGVMCQNVGTAAAVYRAVRFGEPL 284 Query: 236 YQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGG 294 +++ +G V PG +E+ G ++L+ D K GG Sbjct: 285 ----------ISRITTVTGDGVATPGNFEVLLGAPMSDLLQQAG---FDADKTDRLIMGG 331 Query: 295 AGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWC 354 F + LDLP+ S M + ++C C Sbjct: 332 PMMGF-SLTDLDLPLVKTS------------------NCIMAVSAKEFPRPDPAQACIRC 372 Query: 355 TPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKY 414 C + P ++L + + + E F C++ + PL +Y Sbjct: 373 GLCAEACPA--ELLPQQLYWFSKAQEFDKAENYNLFDCIECGACSYVCPSSIPLVQYYRY 430 Query: 415 FREEFEAGIKQPFSNTHLINGIQPNLLKER 444 + + +++ + + R Sbjct: 431 AKHQIRMTVQEQ--QKSDKARERFEFRQAR 458 >UniRef50_Q603B2 Electron transport complex, C subunit n=1 Tax=Methylococcus capsulatus RepID=Q603B2_METCA Length = 523 Score = 293 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 88/448 (19%), Positives = 140/448 (31%), Gaps = 69/448 (15%) Query: 1 MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEG-ARKALTGLSPDEIVNQVKDAGL 59 + I P HP + +D +E A L+PDE+ + +AG+ Sbjct: 81 VSAIEPRPLPHPSGLADL----AIVIDTDGEDLAFETEAHPDYQRLAPDELRRIIFEAGI 136 Query: 60 KGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLIS 119 G GGA F T +K I L+ N E EP D L+ P ++EG I Sbjct: 137 VGLGGAAFPTAVKTDP----GHRAIDTLILNGAECEPYITCDDSLLRHFPREVLEGARIL 192 Query: 120 AFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYI 179 L R + + + EA LR I TG ++ V T Y Sbjct: 193 MRVLGVERCLLGIEDDMPEAIRALRE--------------IQETGEYQDIDVITVPALYP 238 Query: 180 CGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNI 239 G E LI L GR R P NV T V Y+ + Sbjct: 239 SGGEKQLIRILTGREVPTRGIPA--------DAGVVCQNVGTAAAV----------YRAV 280 Query: 240 SKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTD 298 + + +++ +G+ ++NPG W GT +++ G + GG Sbjct: 281 VRGEPLIERIVTVTGKGIRNPGNWLTRIGTPIADLVRYSGGYSGAAERL---ILGGPMMG 337 Query: 299 F-LTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPC 357 L+ L L + G T A+ C C C Sbjct: 338 ISLSSDALPLVKAANCVLVTGRGETTGPKQALP--------------------CIRCGAC 377 Query: 358 RDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFRE 417 + P + +L + ++ +E+ C + + PL + + Sbjct: 378 AEVCP--INLLPQQLYWYSRADNLRRVEEYHVTDCIECGCCDYVCPSHIPLVQYFRAAKS 435 Query: 418 EFEAGIKQPFSNTHLINGIQ-PNLLKER 444 E A + + + KER Sbjct: 436 ELVAKQRDRVKADRARERFEARQIRKER 463 >UniRef50_B4RTX9 Electron transport complex protein RnfC n=2 Tax=Alteromonas macleodii RepID=B4RTX9_ALTMD Length = 852 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 76/426 (17%), Positives = 130/426 (30%), Gaps = 75/426 (17%) Query: 1 MKNIIRTPETHPLTWR-----LRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVK 55 + I HP +R D + W + + + +E++ + Sbjct: 94 IVAIAPHVVAHPSGLTEMCISIRPDGKDTWCEL--------SPIANYSDVHSNELIEAIC 145 Query: 56 DAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEG 115 AG+ G GGAGF T +K S S + +L+ N E EP D LM + + +G Sbjct: 146 QAGISGMGGAGFPTHIKTST-----SKPVEFLILNGIECEPYITSDDRLMREHAWQIRQG 200 Query: 116 MLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGA 175 + I + + + EA L A + E V Sbjct: 201 LDILTHLIGPKAIIVAVEDNKPEAFEALSIACQDKKEY----------------RVVNVE 244 Query: 176 GRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEW 235 +Y G E LI + GR + PA G + NV T + + +G Sbjct: 245 TKYPAGGEKQLIQVITGREVP---RNGLPADIGVM-----MFNVGTCFAIADAILHG--- 293 Query: 236 YQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGG 294 K +++ +G V++P + GT +L++ K GG Sbjct: 294 -------KPLIERIVTVTGEAVESPSNFRALIGTPVSHLLDEAK-YNPKKQKKPKVVMGG 345 Query: 295 AGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWC 354 F + + +V + L + A C C Sbjct: 346 PMMGFTLSD-------------------ATIPVIKTTNCLLVPAKKELVDDNAERPCIRC 386 Query: 355 TPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKY 414 + C D P S+ + + + D L CA+ + PL + Sbjct: 387 SACADACPASLLPQQMFWHAKAKEYDKAEEYDLFD--CIECGACAYVCPSEIPLVHYYRQ 444 Query: 415 FREEFE 420 + E Sbjct: 445 AKAEIR 450 >UniRef50_C7RDT7 Electron transport complex, RnfABCDGE type, C subunit n=2 Tax=Anaerococcus RepID=C7RDT7_ANAPD Length = 439 Score = 289 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 74/400 (18%), Positives = 134/400 (33%), Gaps = 60/400 (15%) Query: 22 QPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDES 81 + V +D E K L+ +EIV ++K+AG+ G GGA F +K+ + Sbjct: 95 KAVVIDTEGFDQDKEYIEKDNVDLNAEEIVAKIKEAGIVGMGGAAFPAHIKY-----LPA 149 Query: 82 MNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAV 141 + ++ N E EP D LM+ P +++ + + A+ A +G I + +A Sbjct: 150 KPVDTVIVNGAECEPYITCDDYLMKNRPERILKALNQAMKAVGAKKGIIAIEDNKPKAFD 209 Query: 142 NLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKP 201 + A+ + F++ + +Y G+E +I+ R+ Sbjct: 210 TMVSALEK----------FAKENSSFDIEIKKLQTKYPQGDEKRIIDVCLNRQV------ 253 Query: 202 PFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPG 260 P+ V+NV T+ + + Y +++ +G+ VKNP Sbjct: 254 --PSGGLPMDVGAIVSNVSTMNAIYEAIYMDKPLY----------ERIVTVTGKSVKNPT 301 Query: 261 LWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSR 320 + GT ++E+ G GG L P E S Sbjct: 302 NMLVRCGTEFGYLIEEAGGA----DDIAKLVNGGPMCGIAQPD-LTRPTEKAS------- 349 Query: 321 LGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGD 380 ++ L + E C C C D P + L Sbjct: 350 ------------NCVLVLASDEAEPLEVSPCIRCGRCVDVCPVYLLPL--YIHKFSLEER 395 Query: 381 IETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFE 420 E ++L C+ + PL AIK+ + + Sbjct: 396 FEKAQELNIMDCIECGSCSFVCPSNRPLVEAIKFGKRQIR 435 >UniRef50_Q51696 Putative uncharacterized protein ORF2 n=1 Tax=Brevundimonas diminuta RepID=Q51696_BREDI Length = 401 Score = 288 bits (736), Expect = 4e-76, Method: Composition-based stats. Identities = 119/388 (30%), Positives = 179/388 (46%), Gaps = 12/388 (3%) Query: 37 GARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEP 96 A + T + + + Q+ A L G+GGA F + K + ++ +YL+ N E EP Sbjct: 26 AAYRYATTIDAEAFLAQIDQAQLSGKGGANFPSARKMR-LFHQQAAPRKYLVVNGGEHEP 84 Query: 97 GTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLL 156 G+ KD L+ P ++EG L A AL A + + +R A A AG L Sbjct: 85 GSAKDDWLLLHHPDTVIEGALCVAHALGATHILVAVNEGRAATVAAVREAAAAIAIAGRL 144 Query: 157 GKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCV 216 + V Y+ GEETAL+ ++ G+ A P +PP+P SG G PT V Sbjct: 145 FPG---------IEVVLVPDEYVVGEETALLQAVAGQVAKPVRRPPYPIESGHQGMPTLV 195 Query: 217 NNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILED 276 +NVETL +VP +L G E Y+ + G L F + G+ +P G +L Sbjct: 196 HNVETLAHVPYLLLLGAEAYRGLGAPGQ-GVTLCTFGEEFVHAGVRLVPVGIDLNSLLYG 254 Query: 277 YAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMV 336 Y GG++ G +A QPGG + FL D+ + S+ AGS LG A A ++V Sbjct: 255 YGGGLKSGQAIRAVQPGGPASGFLPADRFDVAFDSASLRAAGSSLGCAAITAYAASDDLV 314 Query: 337 SLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKT 396 + R FFA SC C CR + I+R LE G+ ++ + + + GK Sbjct: 315 AAARQRAAFFASASCEQCPQCRMQTQMLLAIVRQLESGKANARTLQQIPVIVKA-NAGKA 373 Query: 397 FCAHAPGAVEPLQSAIKYFREEFEAGIK 424 C V P+QS I YF+ + +A ++ Sbjct: 374 ICGLIDMPVAPIQSLIHYFKGDIDARMR 401 >UniRef50_C6L993 Na(+)-translocating NADH-quinone reductase, A subunit n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L993_9FIRM Length = 672 Score = 286 bits (733), Expect = 8e-76, Method: Composition-based stats. Identities = 82/424 (19%), Positives = 149/424 (35%), Gaps = 78/424 (18%) Query: 1 MKNIIRTPETHP---LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDA 57 + I L+ +R D + LDE K+L L+PDEIV V++A Sbjct: 320 VVAIEPHGHATRGECLSVVIRSDGKN-TLDESVK------PHKSLDELTPDEIVEIVREA 372 Query: 58 GLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGML 117 G+ G GGAGF T +K I +L N E EP D ++ + ++ G+ Sbjct: 373 GIVGMGGAGFPTSVKLKPP-----KPIDTILLNGCECEPYLTADHRVLLEFADDVIYGLK 427 Query: 118 ISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGR 177 + A +G I + +A ++ A+ + V + Sbjct: 428 AIIKTVNAEKGLIVIEDNKPDAIELMQAKTADC----------------DNIEVVVAKTK 471 Query: 178 YICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQ 237 Y G E LI + GR+ P V+N+ T + + G+ Sbjct: 472 YPQGAEKMLIKRVMGRQVPRGGLPA--------DVGCVVSNISTTKAISDAIQKGMPL-- 521 Query: 238 NISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAG 296 +++ +G VK PG + + GT +++++ G + D + KA GG Sbjct: 522 --------IERVVTVTGERVKKPGNYIVKIGTNTKDLIDYCGGLVGDDITIKA---GGPM 570 Query: 297 TDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTP 356 F+ + ++P+ G+ +A+D + ++ + C C Sbjct: 571 MGFVLKDT-NVPI----------MKGSNGIIAIDTDYSV------------EQPCIKCGR 607 Query: 357 CRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFR 416 C D P + L + + ++ + C + + PL S IK + Sbjct: 608 CVDVCPMELSPL--YFSKYADEQNWQGMKDMNVMDCVECRSCEYICSSRIPLVSKIKAGK 665 Query: 417 EEFE 420 Sbjct: 666 SAVR 669 >UniRef50_Q21I18 Serine/threonine protein kinase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21I18_SACD2 Length = 745 Score = 286 bits (733), Expect = 9e-76, Method: Composition-based stats. Identities = 76/451 (16%), Positives = 141/451 (31%), Gaps = 79/451 (17%) Query: 1 MKNIIRTPETHPL-----TWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVK 55 + I THP ++ D + W ++ L D +V +++ Sbjct: 81 VIAIEDRVVTHPSGMSAQCIIIKPDGEDRWTQLDACED--------YAQLDHDRLVQKIR 132 Query: 56 DAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEG 115 AG+ G GGAGF T +K + + +++ L+ N E EP D +LM + +V+G Sbjct: 133 AAGIVGMGGAGFPTAIKVNP---KSNKHVKTLIFNGTECEPYITADDMLMRERADDIVKG 189 Query: 116 MLISAFALK-AYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTG 174 + + A + I + EA +++A ++ V Sbjct: 190 VQLIARFMGEVEETLIGIEDNKPEAIAAMQKAAE-----------------GTDIEVVVF 232 Query: 175 AGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVE 234 +Y G E LI L G+ P+ V NV T + G Sbjct: 233 PTKYPSGGEKQLIQILTGKEV--------PSGGLPADIGIVVQNVGTALAAYRAVRFGEP 284 Query: 235 WYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPG 293 +++ G + ++ GT +LE + K + G Sbjct: 285 L----------ISRVTTVVGETLTTQRNIDVLIGTPLSFVLEQHG---FKAEKKQRLIIG 331 Query: 294 GAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGW 353 G F D+P+ T +A + ++ ++C Sbjct: 332 GPMMGFA-ANDFDVPVVKT----------TNCILAPTQKELPLA--------PPAQACIR 372 Query: 354 CTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIK 413 C C + P +L Q D + L+ F C++ + PL + Sbjct: 373 CGMCAEACPA--SLLPQQLFWYSQAEDHDRLKAHNLFDCIECGACSYVCPSNIPLVQYYR 430 Query: 414 YFREEFEAGIKQPFSNTHLINGIQPNLLKER 444 + + I ++ +ER Sbjct: 431 ASKGAIK--IANAEREKSDKARVRFEFRQER 459 >UniRef50_A8AH10 Electron transport complex protein rnfC n=6 Tax=Gammaproteobacteria RepID=RNFC_CITK8 Length = 705 Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 82/420 (19%), Positives = 134/420 (31%), Gaps = 71/420 (16%) Query: 1 MKNIIRTPETHPLTWR-LRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGL 59 + I HP L D + ++G+ S +E++ ++ G+ Sbjct: 89 VIAITPHSTAHPSALAELSVMIDADGEDRWIERDGWA----DYQRRSREELITRIHQFGV 144 Query: 60 KGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLIS 119 G GGAGF TG+K + I L+ NA E EP D LM+ +VEG+ I Sbjct: 145 AGLGGAGFPTGVKL----QGGGDKIETLIINAAECEPYITADDRLMQDCAAQVVEGIRIL 200 Query: 120 AFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYI 179 A L+ I + +A LR +A+A ++ + +Y Sbjct: 201 AHILQPREVLIGIEDNKPQAISMLRAVLADAH----------------DIALRVIPTKYP 244 Query: 180 CGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNI 239 G L L G++ + + NV T V + +G Sbjct: 245 SGGAKQLTQILTGKQVPHGGRSS--------DIGVLMQNVGTAYAVKRAVIDG------- 289 Query: 240 SKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTD 298 + +++ +G V PG GT +L D + GG Sbjct: 290 ---EPITERVVTLTGESVSRPGNVWARLGTPVSHLLNDAGFCSSAD---QMVIMGGPLMG 343 Query: 299 FLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCR 358 F LD+P+ + + + E + C C+ C Sbjct: 344 FTLP-WLDVPVVKIT------------------NCLLAPSATEMGETPEEQGCIRCSACA 384 Query: 359 DGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREE 418 D P + + +GQ D T + CA + PL YFR+E Sbjct: 385 DACPADLLPQQLYWFSKGQQHDKATAHNIAD--CIECGACAWVCPSSIPLVQ---YFRQE 439 >UniRef50_C9XNL2 Electron transport complex protein n=7 Tax=Clostridiales RepID=C9XNL2_CLODC Length = 445 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 79/431 (18%), Positives = 140/431 (32%), Gaps = 66/431 (15%) Query: 1 MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLK 60 + I + P + + +E + + L LS ++IV +K+AG+ Sbjct: 80 VIAIEQH--EVPGGSAQCVVIENDFKEE---LHESVQPKGQLEDLSKEDIVGIIKEAGIV 134 Query: 61 GRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISA 120 G GGA F +K S P ++ N E EP D LM + P +V G+ Sbjct: 135 GMGGATFPNHVKVSPPP---DSKAEVVILNGAECEPYLTADHRLMVENPEDVVFGLRALM 191 Query: 121 FALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYIC 180 L +G+I + +A ++ + E+ V +Y Sbjct: 192 KVLDVKKGFIGIETNKPDAIEAIQNVAKDY----------------SEIEVVGLQVKYPQ 235 Query: 181 GEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNIS 240 G E LI + G+ P+ V+NV T + + G+ Sbjct: 236 GAEKQLIYACTGKEV--------PSGGLPIAAGAVVDNVATAAQIAKSIKTGMPL----- 282 Query: 241 KSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDF 299 ++ +G +K P GT EI+E GG ++ K GG Sbjct: 283 -----VERITTITGSCIKEPKNLITKVGTLVSEIIEQ-CGGFKEDKKIGKVIMGGPMMGI 336 Query: 300 LTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRD 359 + + + G++ + +D E + ++C C C D Sbjct: 337 -----------AQYTTEIATNKGSSGILCLDEEES---------RTPDIQNCLRCGRCTD 376 Query: 360 GLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEF 419 P ++ L D +T E C+ A PL +I+ + E Sbjct: 377 VCPSFLQPL--FISAYSLKDDYDTAEYHRAMDCIECGSCSFICPARRPLLQSIRSAKREI 434 Query: 420 EAGIKQPFSNT 430 A ++ + Sbjct: 435 GAKRRKQAAQK 445 >UniRef50_Q0VP39 Electron transport complex protein rnfC n=12 Tax=Gammaproteobacteria RepID=Q0VP39_ALCBS Length = 991 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 90/451 (19%), Positives = 146/451 (32%), Gaps = 80/451 (17%) Query: 1 MKNIIRTPETHP-----LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVK 55 + I P HP + + D + W++ ++G T SP E+V+ ++ Sbjct: 110 VSAIGPRPIQHPSGMDAVCIVIDTDGEDQWIE-------HQGVT-DFTEKSPAELVDIIR 161 Query: 56 DAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEG 115 AG+ G GGAGF T +K +L + + L+ NA E EP D LM + +V G Sbjct: 162 HAGIAGMGGAGFPTSIKVNL---GDHQRVEQLIINAVECEPYITADDRLMRERAEQIVTG 218 Query: 116 MLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGA 175 + I + L R I + EA ++RA ++ V Sbjct: 219 IHILQYLLNPRRTLIGIEDNKPEAISAIKRACK-----------------GCDIEVRVVP 261 Query: 176 GRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEW 235 +Y G E LI L G+ PA G NV T + + +G Sbjct: 262 TKYPSGGEKQLIQLLTGKEVASGQ---LPAQVGV-----VCQNVGTAYAIKRAVCDGEPL 313 Query: 236 YQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGG 294 +++ +G V PG +E+ GT R++L G GL+ GG Sbjct: 314 ----------ISRVTTLTGDGVSQPGNYEVLLGTPVRDLLAY---GNLAGLEIGRLVMGG 360 Query: 295 AGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLV-RNLEEFFARESCGW 353 F L V +++ L E + C Sbjct: 361 PMMGFT--------------------LHNPAVPVVKTTNCIIAASPEELPEPPPEQPCIR 400 Query: 354 CTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIK 413 C C + P +L + D+E + CA+ + PL + Sbjct: 401 CGSCAEVCPA--NLLPQQLYWHAKNDDLEKAQHHNLMDCIECGACAYVCPSHIPLVQYYR 458 Query: 414 YFREEFEAGIKQPFSNTHLINGIQPNLLKER 444 Y + E + + R Sbjct: 459 YAKAEVRQQAADQL--KADKARQRFEARQAR 487 >UniRef50_A5HYR2 Electron transport complex protein n=37 Tax=Bacteria RepID=A5HYR2_CLOBH Length = 439 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 76/388 (19%), Positives = 135/388 (34%), Gaps = 63/388 (16%) Query: 40 KALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTY 99 K ++ +EI+ ++ AG+ G GGA F T +K S P I ++ NA E EP Sbjct: 114 KDYNEMTKEEIIKLIQQAGIVGMGGACFPTHVKLSPPP---DKKIDSIIVNAAECEPYLT 170 Query: 100 KDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKN 159 D LM + +VEG+ I +GYI + +A +++A Sbjct: 171 CDHRLMLEESDKIVEGLKIILKIFPEAKGYIGIENNKPDAIEAMKKA------------- 217 Query: 160 IMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNV 219 + + V +Y G E LI +++GR + V N Sbjct: 218 ---SEGIANIEVKALKTKYPQGAEKQLIYAIKGREVQ--------SGKLPADAGCVVQNT 266 Query: 220 ETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYA 278 T+ E Y + + +++ +G VK P + GT RE++E Sbjct: 267 ATV----------REIYNAVVLGRPLIERIITVTGEAVKEPKNIRMKLGTNLRELVEFCG 316 Query: 279 GGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSL 338 G D +K GG LD+P + G++ +++ ++ Sbjct: 317 GYKEDPVK---VISGGPMMGMTIPT-LDIP----------TVKGSSGLLSLTTAQAVL-- 360 Query: 339 VRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFC 398 SC C C + P ++ + G++ + E+L C Sbjct: 361 -------PQASSCIRCGRCVEACPM--NLIPSTLDSLSNRGELASFEELHGIDCIECGCC 411 Query: 399 AHAPGAVEPLQSAIKYFREEFEAGIKQP 426 A L +I+ + A ++ Sbjct: 412 TFVCPAKRHLIQSIRTAKRTVIASKRKK 439 >UniRef50_D0L1N5 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L1N5_HALNC Length = 567 Score = 284 bits (726), Expect = 5e-75, Method: Composition-based stats. Identities = 79/450 (17%), Positives = 143/450 (31%), Gaps = 77/450 (17%) Query: 1 MKNIIRTPETHP-----LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVK 55 + +I P HP + L D +W + Y+ +SP ++ +++ Sbjct: 89 IVDISPQPIAHPGGLSAPSIILEADGDDIWAERMTPWVDYQ-------DISPAQLRGRLR 141 Query: 56 DAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEG 115 +AG+ G GGA F T K +R L+ N E EP D LM + P ++ G Sbjct: 142 EAGIVGLGGAVFPTASKM----ATGQAAVRTLILNGAECEPYITCDDRLMREQPAEILRG 197 Query: 116 MLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGA 175 I+ + A R I + EA L+ A + D V++ Sbjct: 198 AAIAMHMIGAERCLIGIEDNKPEALAALQSA----------------SRSDPRFEVYSVP 241 Query: 176 GRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEW 235 RY G E LI L P A NV T+ + + G Sbjct: 242 TRYPAGGEKQLIKVLTNIEV--------PRGHRAIEYGLLCLNVATVVGIHRAVTLG--- 290 Query: 236 YQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGG 294 + +++ +G + P ++ GT +++ + G + GG Sbjct: 291 -------EPMLDRIVTVTGEGIAQPENLQVRIGTLMSDVVAEAGGYRSE---VDRLIMGG 340 Query: 295 AGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWC 354 F ++P+ T +A+ + A + C C Sbjct: 341 PMMGFALHGD-EVPVVKA----------TNCLLALRPQDRPAE--------PAPQPCIRC 381 Query: 355 TPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKY 414 + C + P +L + + + + F C+ + PL +Y Sbjct: 382 SLCAEACPA--DLLPQQLYWYARAKQFDRVVEYHLFDCIECGVCSAVCPSHLPLVDYYRY 439 Query: 415 FREEFEAGIKQPFSNTHLINGIQPNLLKER 444 + E A ++ + + ER Sbjct: 440 AKTEVWAREREKSKASQARE--RFEFRNER 467 >UniRef50_Q31GU4 NADH oxidoreductase, RnfABCDGE type, C subunit n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31GU4_THICR Length = 704 Score = 283 bits (724), Expect = 9e-75, Method: Composition-based stats. Identities = 82/443 (18%), Positives = 144/443 (32%), Gaps = 80/443 (18%) Query: 1 MKNIIRTPETHP-----LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVK 55 + I H L+ L D++ ++ +G T +PD++ V Sbjct: 105 IIAIEPRTLPHASGLSGLSIVLESDQKDQAIENSLEVDG-------ATPGTPDKLKALVH 157 Query: 56 DAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEG 115 AG+ G GGAGF T K + I+YLL N E EP D +LM+ +V+G Sbjct: 158 KAGIVGMGGAGFPTFAKI----PSQPGQIKYLLINGAECEPFITCDDMLMQTRAEDIVQG 213 Query: 116 MLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGA 175 +I A +L + +A +++A D ++ ++ A Sbjct: 214 AMIVAQSLGIKHILCGIEDNKAKAIKAMQKAAK-----------------DTDVQINVVA 256 Query: 176 GRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEW 235 Y G +T L L G PA + A + NV T + Sbjct: 257 TAYPMGGQTQLTQELTGIE--------LPAHTHAIDVGVLMMNVATFAAI---------- 298 Query: 236 YQNISKSKDAGTKLMGFSG-RVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGG 294 YQ + + ++ + SG + P + GT+ +E+ + L + GG Sbjct: 299 YQAVVQGNPLTSRYITVSGLGLNKPFNIDARLGTSFKEL--ALLADPKTPLDY-PLIKGG 355 Query: 295 AGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWC 354 + + + +++ E C C Sbjct: 356 PMMGI--------------------EMQSNDVPVIKTTNCILATPPEPLEEPMP--CIRC 393 Query: 355 TPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKY 414 C D P V +L + + + +E L F C+ + PL ++ Sbjct: 394 GECMDACP--VNLLPQQLYWHSRSHEFDKVESLKVFDCIECGCCSFVCPSHIPLVQYYRF 451 Query: 415 FREEFEAGIKQPFSNTHLINGIQ 437 + E + IKQ + L Sbjct: 452 AKSEIK-HIKQEEATAELAKKRH 473 >UniRef50_B2HFH1 NADH dehydrogenase I (Chain F) (NADH-ubiquinone oxidoreductase chain F), NuoF_1 n=12 Tax=Mycobacterium RepID=B2HFH1_MYCMM Length = 445 Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats. Identities = 108/436 (24%), Positives = 189/436 (43%), Gaps = 28/436 (6%) Query: 8 PETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGF 67 P + D + + YR++ GY A D+++ ++ +GL GRGGA F Sbjct: 18 PRLLRVAGGHADQQDHEDVAAYRAQGGYRPLGDA------DKLLREIDASGLLGRGGAAF 71 Query: 68 STGLKWSLMP----KDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFAL 123 +K + + ++ N +E EP ++KDR L+ PHL+++G+ ++A + Sbjct: 72 PLAVKMRAVRDNCRRAGPAGGAVVIANGEEGEPASFKDRWLLRNRPHLVLDGLRLAAALV 131 Query: 124 KAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEE 183 A R Y+++ E+A ++ RA+ + G + V Y+ GEE Sbjct: 132 AATRAYVYVSD--PESARSVERALTQLDPDAFGG---------VAVSVWAVPPGYVAGEE 180 Query: 184 TALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSK 243 TA + ++ G P KPP P G G+PT V+NVETL N+P + +G Y+ + Sbjct: 181 TAAVRAINGGPVKPSDKPPRPFEYGVSGRPTLVSNVETLANLPYLHRHGASEYRALGTPS 240 Query: 244 DAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEA 303 GT L +G + P L+ELP+G E+L +A K + GG L Sbjct: 241 SPGTFLATITGAGRAPVLYELPYGLPFSELLALHA---VAPTKIRGVLMGGYFAGLLNRG 297 Query: 304 HLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPW 363 L ++ E++ + GS LG + + V++ ++ +F RE+ G C C +G Sbjct: 298 VLGTTLDHETMRRLGSGLGCGAISVITDD-CPVAVAASVLSYFDRENAGQCGSCFNGTAA 356 Query: 364 SVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGI 423 + AL DI+ L + L G+ CA A + + F +E + + Sbjct: 357 MAAVGGALRDFAATSEDIDRLRRWSVVLR-GRGACATLDAATNAAATLLSQFPDEVASHL 415 Query: 424 KQPF--SNTHLINGIQ 437 + ++ + Sbjct: 416 EGACQDCSSGTGGAFR 431 >UniRef50_B4K2N7 GH25296 n=4 Tax=Coelomata RepID=B4K2N7_DROGR Length = 833 Score = 281 bits (718), Expect = 5e-74, Method: Composition-based stats. Identities = 113/336 (33%), Positives = 178/336 (52%), Gaps = 13/336 (3%) Query: 20 DKQPVWLDEYRSKN---------GYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTG 70 D ++ + Y + G L + + IV++VK +GL+GRGG+G+ TG Sbjct: 128 DCDRIFQNLYGFHDWRLKGACQRGDWYRTADLLDMGANWIVDEVKRSGLRGRGGSGYYTG 187 Query: 71 LKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYI 130 KW + K + N + L+ N E EPGT KDR ++ PH ++EG L++ +A+ + I Sbjct: 188 NKWEFLQKVNANN-KILILNCAEGEPGTCKDREILRHEPHKIIEGCLLAGYAMGCEKCII 246 Query: 131 FLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSL 190 ++R + A NL+ A+AEA GLLG N TG F++ V G RY+ GEETAL+N L Sbjct: 247 YVRNCFYNEACNLQFALAEAYRYGLLGCNACDTGIKFDIQVQRG-DRYLSGEETALVNCL 305 Query: 191 EGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLM 250 G+ A PR +PP+ G + P V N ETL VP IL G +W+ + ++ + GTKL Sbjct: 306 MGKLARPRKRPPYLHEQGYFDHPCLVLNTETLAVVPTILRRGAKWFTGLGRNMNFGTKLF 365 Query: 251 GFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGL-KFKAWQPGGAGTDFLTEAHLD-LP 308 G V++P E REI++ +AGG+ G PGG + + + + L Sbjct: 366 SICGHVQHPCTVEEEMSMPLREIIDMHAGGVCGGWNNLLGVFPGGLSSPLIGKVGAEGLL 425 Query: 309 MEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEE 344 M+++ + KAGS GT + V + + + +++ E Sbjct: 426 MDYDCLQKAGSSFGTGGIIVVSNNCDPLLVMQRSIE 461 >UniRef50_A5N7M5 RnfC n=6 Tax=Clostridiales RepID=A5N7M5_CLOK5 Length = 452 Score = 280 bits (717), Expect = 6e-74, Method: Composition-based stats. Identities = 79/428 (18%), Positives = 139/428 (32%), Gaps = 75/428 (17%) Query: 10 THP-----LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGG 64 HP LT + +D + W++ + LS +I++ +++AG+ G GG Sbjct: 86 PHPGFGKCLTIVIENDGKDEWIEGI-------PISRNWQDLSDKDIMSIIREAGIVGMGG 138 Query: 65 AGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALK 124 A F + +K S + + + N E EP D M + +V G+ I LK Sbjct: 139 ATFPSHVKLSPPA---DKKVEFFILNGAECEPYLTSDYRSMLEYTDRIVSGVKIIMKILK 195 Query: 125 AYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEET 184 A +G++ + +A + +A + V +Y G E Sbjct: 196 AEQGFVGIEDNKKDAIEVMEKAFE-----------------GTGVQVVALPTKYPQGAEK 238 Query: 185 ALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKD 244 LI L GR P+ V NV T V + G+ Q Sbjct: 239 MLIKVLTGREV--------PSGRLPMDVGAVVQNVGTCIAVSDAVEKGIPLIQ------- 283 Query: 245 AGTKLMGFS-GRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEA 303 ++ S G +K P L GTT + ++ G +K GG F ++ Sbjct: 284 ---RVTTLSGGALKEPKNLLLRIGTTFKYAVDLCGGFKETPVK---VVMGGPMMGF-AQS 336 Query: 304 HLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPW 363 +L++P+ G + +++ +C C C + P Sbjct: 337 NLEVPI----------LKGVSGILSLSESD---------ANTGTETACIRCGRCFNACPM 377 Query: 364 SVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGI 423 S+ G+ E C + A + +KY + E A Sbjct: 378 SLNPSMLSILGQNNLYREAK-EDYNLLDCVECGSCVYVCPAKRNIVQYVKYLKAENAAQA 436 Query: 424 KQPFSNTH 431 + + Sbjct: 437 ARDKAEAE 444 >UniRef50_C3JHP2 Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit n=1 Tax=Rhodococcus erythropolis SK121 RepID=C3JHP2_RHOER Length = 403 Score = 280 bits (716), Expect = 7e-74, Method: Composition-based stats. Identities = 112/389 (28%), Positives = 186/389 (47%), Gaps = 21/389 (5%) Query: 46 SPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLM 105 D +++ + +GL GRGGAGFS G+K + + ++ N E EP + KD +L+ Sbjct: 30 GDDSVISAISRSGLAGRGGAGFSAGVKMAAITGRRP----VVIANGSEGEPLSSKDAVLL 85 Query: 106 EQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGF 165 PHL+++G+ I+A A++A ++ + + LR AI E +G Sbjct: 86 SDSPHLVLDGLSIAAAAVRATDAFLVVPASHT---ERLRNAITERRHSGW---------D 133 Query: 166 DFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNV 225 ++ V AGR++ GE+TALI ++EG+ PRS + SG G+PT V+NVETL +V Sbjct: 134 RTDVRVVASAGRFVSGEKTALIAAVEGKPPIPRSSLASSSKSGVKGRPTLVHNVETLAHV 193 Query: 226 PAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGL 285 I GV+W+++ + + GT L+ SG V NPG+ E+P G+ ++ D G D Sbjct: 194 ATIARFGVDWFRSSGTTSEPGTMLVTLSGAVNNPGVVEVPIGSRLEWVVGDI--GRADMD 251 Query: 286 KFKAWQPGGAGTDFLTEAHL-DLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEE 344 +A GG ++ A L + ES+ G+R G + A+ + + ++ + Sbjct: 252 NTRAVLVGGYHGTWINRADLAGRRLSRESLAAIGARPGAGVVHALAVDTCGLRATADIVD 311 Query: 345 FFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGA 404 + ARES G C PC +GLP + L I + + + G+ C H G Sbjct: 312 YLARESAGQCGPCLNGLPRLASVFGDLAYHRPGEQTIHEIRRYAGLV-DGRGACHHPDGT 370 Query: 405 VEPLQSAIKYFREEFEAGIKQPFSNTHLI 433 V ++SA+ F ++ Sbjct: 371 VRLVRSALTAFADDVRLH-STGHCEATAR 398 >UniRef50_C1IC09 Respiratory-chain NADH dehydrogenase n=2 Tax=Streptomyces RepID=C1IC09_STRCI Length = 497 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 111/432 (25%), Positives = 177/432 (40%), Gaps = 23/432 (5%) Query: 3 NIIRTPETHPLTWRLRDD----KQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAG 58 TP T RL D +P L ++ E R+ T + +V+ V+ AG Sbjct: 66 PAPPTPGPDGYTARLLADWRATGRPATLGDHLRHR--EALRR--TTDARGSLVDAVEAAG 121 Query: 59 LKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLI 118 L GRGGAGF T K + + ++ NA E EP + KD+ L+ PHL+++G ++ Sbjct: 122 LTGRGGAGFPTARKMRSVAAGRGRPV--VVVNAMESEPASRKDQFLIAVAPHLVLDGAVL 179 Query: 119 SAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRY 178 +A + A ++ L L A+ E A L + +H Y Sbjct: 180 AAVQVGADTVHVCLPRTRTAQQRRLGNAVEERRSARL---------DPVRIRLHALPHGY 230 Query: 179 ICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQN 238 + E T+L+ L+G A PR PP G +PT V+N ETL ++ I +G +W++ Sbjct: 231 VSSESTSLVRWLDGGPARPRGNPPHSHERGVARRPTLVHNAETLAHLALIARHGPDWFRR 290 Query: 239 ISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTD 298 + GT ++ SG V PG+ E+P G L +A GG Sbjct: 291 AGTPDEPGTMMITVSGAVTAPGVGEVPLGIPLDTALGRAG---DTTEPVRALLVGGFAGT 347 Query: 299 FLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCR 358 +L L P+ + G+ G + +A+ + + F +S C PCR Sbjct: 348 WLPAEDLHTPLTRRDLAPLGAAPGAGVLIALPRSACGLLETARILAFLGAQSARQCGPCR 407 Query: 359 DGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREE 418 GLP + AL G+ P + L + L P + C H GA SA+ F ++ Sbjct: 408 YGLPAVAEDFAALAAGQSHPELLSRLRRRTGLL-PDRGACRHPDGAARLAASALSAFADD 466 Query: 419 FEAGIKQPFSNT 430 + + + Sbjct: 467 VDRHLARGACPA 478 >UniRef50_A5ZMX0 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5ZMX0_9FIRM Length = 583 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 74/377 (19%), Positives = 139/377 (36%), Gaps = 68/377 (18%) Query: 38 ARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPG 97 K+L L+PDEI++ VK+AG+ G GGAGF T +K + +L N E EP Sbjct: 264 PHKSLDELTPDEIIDIVKEAGIVGMGGAGFPTCVKLKPA-----KPVDTILLNGCECEPY 318 Query: 98 TYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLG 157 D ++ + ++ G+ A +G I + +A ++ +A+ Sbjct: 319 LTADHKVLLEFADDIIFGLKAILKTTGAEKGIIVIEDNKPDAIELMKEKVADIG------ 372 Query: 158 KNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVN 217 + V +Y G E LI + GR+ P+ V+ Sbjct: 373 ----------NMEVFVARTKYPQGAEKTLIKRVMGRKV--------PSGGLPADVGVIVD 414 Query: 218 NVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSG-RVKNPGLWELPFGTTAREILED 276 N+ T+ + + G+ ++ +G ++KNPG + + GT+ +++++ Sbjct: 415 NISTVKAISDAIQKGMPL----------IERVTTITGEKIKNPGNFIIKIGTSVKDLIDY 464 Query: 277 YAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMV 336 G D + K GG F LD+PM G+ +A+D + Sbjct: 465 CGGFTDDDVLVKM---GGPMMGF-PLNTLDVPM----------MKGSNGIIAIDTDE--- 507 Query: 337 SLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKT 396 + C C C D P + L + + + ++ + Sbjct: 508 ---------TKEQPCIKCGRCVDVCPMELSPL--YFVKYAKEENWQGMKDMNVMDCVECR 556 Query: 397 FCAHAPGAVEPLQSAIK 413 C + + P+ ++IK Sbjct: 557 CCQYICSSKIPIINSIK 573 >UniRef50_Q47GW4 Electron transport complex, RnfABCDGE type, C subunit n=2 Tax=Rhodocyclaceae RepID=Q47GW4_DECAR Length = 570 Score = 279 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 82/444 (18%), Positives = 138/444 (31%), Gaps = 72/444 (16%) Query: 1 MKNIIRTPETHPLTWR-----LRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVK 55 + + P HP + D + W+D R Y P+ + ++ Sbjct: 81 VIEVGLYPAAHPSGLTAATVVIEPDGEDRWID--RQPVDYASLE-------PEAVRELLR 131 Query: 56 DAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEG 115 +AG+ G GGA F T K + +++ + ++ N E EP D LLM + +V G Sbjct: 132 EAGIVGLGGAVFPTHGKLT---ASKTVPMEEMVINGAECEPYITCDDLLMRERAEEVVRG 188 Query: 116 MLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGA 175 + L+ + I + EA A +G F E V Sbjct: 189 AGVFRDLLRPKKVLIGIEDNKP-----------EAAAAMTAAIKALGEAFK-EFEVVVVP 236 Query: 176 GRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEW 235 RY G LI L G+ PA+ + NV T LA+G Sbjct: 237 TRYPAGGAKQLIRVLTGKEV--------PASKRSTDLGVQCFNVATAYTAWRALAHG--- 285 Query: 236 YQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGA 295 + ++L+ +G V P WE+ GT E+L G + GG Sbjct: 286 -------EPVISRLVTITGNVGEPRNWEVLIGTPMDELLRI--GQPKPDTD--GIIMGGP 334 Query: 296 GTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCT 355 FL +P + KA + L + C C Sbjct: 335 MMGFL------VPDTKAPVVKATNCLIAHSPTLFPPKPP-------------EMPCIRCG 375 Query: 356 PCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYF 415 C P ++ + + ++ F C+ + PL ++ Sbjct: 376 ECARACPHELQPFEMYWFSRAK--NFGKTQEYAIFDCIECGCCSFVCPSRIPLVQYFRFA 433 Query: 416 REEFEAGIKQPFSNTHLINGIQPN 439 + E A ++ + N + Sbjct: 434 KSEIWARERESQAAEGAKNRFEFK 457 >UniRef50_A7BY78 Electron transport complex protein rnfC n=4 Tax=Gammaproteobacteria RepID=A7BY78_9GAMM Length = 446 Score = 278 bits (711), Expect = 3e-73, Method: Composition-based stats. Identities = 87/422 (20%), Positives = 141/422 (33%), Gaps = 65/422 (15%) Query: 1 MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLK 60 ++ I P HP +L+ + D Y ++ LS +E +N V+ AG+ Sbjct: 87 VRAIE--PRRHP-GGQLQPAIEIE-ADPYATQRLESKPAIDWMALSIEEFINHVQKAGIV 142 Query: 61 GRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISA 120 G GGA F + +K++L + M I++L+ N E EP D LM + P L+ G+ I Sbjct: 143 GMGGAAFPSHVKYALP---DGMQIKHLVINGAECEPYLTNDHRLMLERPDTLLRGIEIVR 199 Query: 121 FALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYIC 180 L A + I + +A L++ I + + + +Y Sbjct: 200 QKLGATQATIGVELNKTDAINTLQKHIDQQQIK--------------NIRMVPLRVKYPQ 245 Query: 181 GEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNIS 240 G E +I SL P P VNNV T+ + G+ Sbjct: 246 GAEKMMIKSLFNIEIPPGQLP--------RDVGVTVNNVSTIVAIADYFETGMPL----- 292 Query: 241 KSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDF 299 +++ SG V+ P +P GT ARE+L G GG Sbjct: 293 -----IERIVTVSGPGVEQPANLMVPLGTPAREVLRFCGGLKETTRS---VIMGGPMMGM 344 Query: 300 LTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRD 359 A LD+P+ S + + D E SC C C + Sbjct: 345 -PIASLDVPILKGS---------SGILAFTDEETGKPK----------EYSCIHCGRCVE 384 Query: 360 GLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEF 419 P + R + + + C + + P+ IK + E Sbjct: 385 ACPHFLNPSRLARLSKKRRYT--EMTDYNLMDCVECGACTFSCPSGIPIVQLIKVAKTEI 442 Query: 420 EA 421 Sbjct: 443 RR 444 >UniRef50_Q8RIJ6 Nitrogen fixation iron-sulphur protein RNFC n=17 Tax=Bacteria RepID=Q8RIJ6_FUSNN Length = 441 Score = 278 bits (711), Expect = 3e-73, Method: Composition-based stats. Identities = 80/410 (19%), Positives = 140/410 (34%), Gaps = 72/410 (17%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 +T + +DK+ W + + +N E +KAL ++ +++ G+ G GGA F T +K Sbjct: 100 MTVFIENDKKEEWAELSKIENWEEADKKAL--------LDIIREKGIVGIGGATFPTHVK 151 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 + P + + L+ N E EP D LM + P +VEG+ I L Y+ + Sbjct: 152 LNPPPNTQ---LDSLILNGAECEPYLNSDNRLMLENPKSIVEGIKIIKKILNVPNVYVGI 208 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 EA ++R+A + + +Y G E LI S+ Sbjct: 209 EDNKPEAIESMRKATE-----------------GTGINIVPLKTKYPQGGEKQLIKSILD 251 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGF 252 R+ P+ V N T + Y+ + K K++ Sbjct: 252 RQV--------PSGQLPSAVGVVVQNTGTAAAI----------YEAVVNGKPLIEKVVTV 293 Query: 253 SGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEF 311 SG+ +KNP ++ GT IL++ + + GG Sbjct: 294 SGKAIKNPKNVKVAIGTPFSYILDNCGINREEMARL---VMGGPMMGLAQMTE------- 343 Query: 312 ESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRAL 371 A GT+ ++L + ++C C+ C P + L Sbjct: 344 ----DATVIKGTSGL---------LALTNEEMRPYKTKACISCSKCVSACPMGLAPLMFD 390 Query: 372 ERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEA 421 + + L CA+ A PL +IK + + A Sbjct: 391 RLAAAKEYEEMAAHNLMD--CIECGSCAYICPANRPLAESIKTGKAKLRA 438 >UniRef50_D1N841 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N841_9BACT Length = 440 Score = 278 bits (711), Expect = 3e-73, Method: Composition-based stats. Identities = 92/413 (22%), Positives = 142/413 (34%), Gaps = 72/413 (17%) Query: 13 LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLK 72 + D Q + + + ++ K E++ + DAGL G GGA F T +K Sbjct: 99 PAIEIEADGQDEPCEPMPAIDWHKADVK--------ELLKRTADAGLVGMGGAAFPTHVK 150 Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 S P I L+ N E EP D LM + P ++EG ISA L YI + Sbjct: 151 LSPPP---DKTIDTLILNGAECEPYLTADHRLMLEQPERVLEGAAISAKILNVKNVYIGV 207 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 I+A L R AE F + V T +Y G E LI ++ G Sbjct: 208 EANKIDAIEALGRRAAE-----------------FGIKVATLKVQYPQGSEKQLIMAITG 250 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGF 252 R+ P V NV T + + G+ ++ Sbjct: 251 RKV--------PTGGLPMDAGCVVQNVGTAAAMTDAVCRGIPL----------VERVTTI 292 Query: 253 SGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEF 311 +G VKNPG W L GT + +E G + K GG F ++ ++P+ Sbjct: 293 TGEVVKNPGNWLLKIGTPVIKAIEFAGGVTAEPGKL---ILGGPMMGFAQKS-FEVPVAK 348 Query: 312 ESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRAL 371 T+ + + E++M + C C C +G P ++ Sbjct: 349 N----------TSGILLLPVELSM---------NYGSTGCIRCGRCVEGCPMNLIPCLLG 389 Query: 372 ERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIK 424 E + D+ Q CA+ A PL ++ + E K Sbjct: 390 NAVEAERFDLAA--QNHVMDCLECGSCAYVCPAHRPLVQHMRRAKAEIRKRKK 440 >UniRef50_A1WTR7 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Halorhodospira halophila SL1 RepID=A1WTR7_HALHL Length = 506 Score = 278 bits (710), Expect = 4e-73, Method: Composition-based stats. Identities = 91/450 (20%), Positives = 137/450 (30%), Gaps = 81/450 (18%) Query: 1 MKNIIRTPETHP-----LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVK 55 + + R P HP T L D + W + E + P I +V Sbjct: 83 VVAVDRHPAPHPSGLTVPTVVLDPDGEEQWSETLP-----EPLTAPARQIDPATIAARVG 137 Query: 56 DAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEG 115 +AG+ G GGA F +K + L+ N E EP D LM + +++G Sbjct: 138 EAGIVGMGGAAFPAAVKL-----GAGQPVATLILNGGECEPYLTCDDRLMRERAAGIIDG 192 Query: 116 MLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGA 175 + A AL A R I + EA LRRA L G + V Sbjct: 193 AQLMARALGAERTAIGVEDNKPEAIHALRRA-----SDALGGPD-----------VVPVP 236 Query: 176 GRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEW 235 + G E LI +L GR PA + A V+NV T V +G Sbjct: 237 SLWPQGSEKHLIYTLTGREV--------PAGARAGDIGVVVHNVGTAYAVHRAARHG--- 285 Query: 236 YQNISKSKDAGTKLMGF-SGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGG 294 + ++ + G V PG +E P G + ++E G + GG Sbjct: 286 -------RPLISRPVTVGGGAVAEPGNFEAPLGLPLQALIEQAGGLREPPAR---VLAGG 335 Query: 295 AGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWC 354 + +A GT +A+ C C Sbjct: 336 PMMGQVAP------------LEAAVAKGTNGVIALTATE---------IREAEGRPCIRC 374 Query: 355 TPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKY 414 C D P + R D L CA+ + PL Y Sbjct: 375 GRCVDACPMGLMPFDIANRAAAGDVDGAAATGLMD--CLTCGSCAYVCPSARPLVQLFHY 432 Query: 415 FREEFEAGIKQPFSNTHLINGIQPNLLKER 444 R + + + +Q + ++R Sbjct: 433 ARGQLAE-----QATAKQRSELQRRMAEQR 457 >UniRef50_A8SLB1 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SLB1_9FIRM Length = 444 Score = 277 bits (708), Expect = 7e-73, Method: Composition-based stats. Identities = 79/395 (20%), Positives = 136/395 (34%), Gaps = 63/395 (15%) Query: 34 GYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADE 93 GYE + +S +I++ +K+AG+ G GGAGF T +K + E Y++ N E Sbjct: 111 GYEEKNLTIDEVSATDIIDAIKEAGIVGLGGAGFPTHVKLT---AREGQITDYIIINCAE 167 Query: 94 MEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEA 153 EP D+L+ME P +V G+L++ A+ A +G + + A L+ A Sbjct: 168 CEPYLTSDQLMMELYPEKVVMGLLLAMKAMGAKKGILGIEDNKPLAIDKLKEA------- 220 Query: 154 GLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKP 213 + E+ V +Y G++ LI + G P+ + Sbjct: 221 ---------SKSYPEVTVSVVKTKYPQGDQKRLIQATTGVVV--------PSGASTSAVG 263 Query: 214 TCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTARE 272 V N T + + +G Y KL+ +G +K P + G+ + Sbjct: 264 IRVVNANTAIAINDAVLHGKPLY----------EKLVTMTGHALKEPQNVMVRVGSKVSD 313 Query: 273 ILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHE 332 I+E G + K GG ++ G +G + + E Sbjct: 314 IVEFIGGYSSEPGK---IISGGPMMG---------ETQYTPNVTTGKAMG--GLLFMTQE 359 Query: 333 INMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLG 392 + V C C C D P ++ L + E+L Sbjct: 360 ESAPKAV---------SPCIRCGRCVDICPVYLQPLYLQL--YTLKNRVGEAEKLHLMDC 408 Query: 393 PGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPF 427 C++ + PL I+ + E K Sbjct: 409 IECGSCSYICPSNRPLVETIRLGKAEVRKQGKGKR 443 >UniRef50_C7HT97 Na(+)-translocating NADH-quinone reductase, A subunit n=3 Tax=Anaerococcus RepID=C7HT97_9FIRM Length = 443 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 79/398 (19%), Positives = 148/398 (37%), Gaps = 65/398 (16%) Query: 24 VWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMN 83 + + Y + YE RK +T L+ ++IV +K+ GL G GGA F +K+S + Sbjct: 106 IDTEGYDQEINYE--RKDVTNLTKEKIVEAMKENGLVGMGGASFPAHIKYSP-----NKP 158 Query: 84 IRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNL 143 I ++ N E EP D +++ P ++V+ + + A+ A +G I + EA + Sbjct: 159 IDTVIINGAECEPYVTCDDFILKTKPEVIVDALELLVQAVDAKKGIIAIEDNKAEAIEKV 218 Query: 144 RRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPF 203 ++A+A +L V T +Y G+E +IN++ R Sbjct: 219 KKALAN--------------KNSSKLEVATMVTKYPQGDEKRIINAVLHREV-------- 256 Query: 204 PATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLW 262 P+ V+NV + V Y+ + K + M +G +KNP + Sbjct: 257 PSGGLPMDVGVIVSNVSSANAV----------YEAVYYGKPLIERYMTVTGHGIKNPSNF 306 Query: 263 ELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLG 322 + GT+ ++E+ G + K GG +++ P+E S Sbjct: 307 LVRIGTSFDHMIEEAGGLTEEAGK---VINGGPMMGIAQP-NINQPVEKAS--------- 353 Query: 323 TALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIE 382 ++ L + + C C C + P + L L + Sbjct: 354 ----------NCILVLNKEESKAPITNPCIRCAKCVNVCPVGLMPL--LIHKFSLKEKFD 401 Query: 383 TLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFE 420 + L C++ + PL AI++ + + Sbjct: 402 KAQDLHILDCIECGSCSYICPSKRPLVEAIRFGKRQIR 439 >UniRef50_C6WYE0 Electron transport complex, RnfABCDGE type, C subunit n=2 Tax=Betaproteobacteria RepID=C6WYE0_METML Length = 637 Score = 274 bits (700), Expect = 5e-72, Method: Composition-based stats. Identities = 74/422 (17%), Positives = 140/422 (33%), Gaps = 75/422 (17%) Query: 3 NIIRTPETHP-LTWRLRDDKQPVWLDEYRSKNGYEGARK-ALTGLSPDEIVNQVKDAGLK 60 +I P P + L+ D + +W + + +E++ ++ +G+ Sbjct: 106 AVIPHPSGLPDICVSLQPDGKDLW----------KPLTPIDWKHTAHNELITSLRTSGIV 155 Query: 61 GRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISA 120 G GGA F T +K KD + I L+ NA E EP D +LM + +++G+ I+ Sbjct: 156 GLGGATFPTHIKL---RKDGASAIHTLIINAAECEPYITCDDMLMRERADEIIQGIAIAQ 212 Query: 121 FALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYIC 180 L+A I + + + V T Y Sbjct: 213 HLLRATAVVIGIEDNKPA----------------AAHAMTAASQTLANVTVTTVPTLYPS 256 Query: 181 GEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNIS 240 G+ LI+ L G P + V NV T+ + Y+ + Sbjct: 257 GDARRLIHLLLGVEV--------PHHKRSTEVGIQVFNVATVLAL----------YRYFT 298 Query: 241 KSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFL 300 + + ++++ +G V +P +E+ GT ++ G D + GG F Sbjct: 299 FGEPSVSRIVTVTGNVASPQNFEVLLGTPMPLLIAAAGGAKADTTH---YVMGGPMMGFD 355 Query: 301 TEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRN-LEEFFARESCGWCTPCRD 359 + L++P+ + +++ N + C CT C D Sbjct: 356 LPS-LNVPVTKAA-------------------NCIIAASPNLFAPPPPAQPCIRCTRCAD 395 Query: 360 GLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEF 419 P +++ + + E F C + + PL +Y + E Sbjct: 396 ACPVNLQPQELYWF--AKSDNFEKARDYKLFDCIECGCCTYVCPSNIPLVQYYRYAKSEI 453 Query: 420 EA 421 A Sbjct: 454 IA 455 >UniRef50_D1B8H6 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B8H6_THEAS Length = 445 Score = 273 bits (698), Expect = 9e-72, Method: Composition-based stats. Identities = 75/394 (19%), Positives = 132/394 (33%), Gaps = 62/394 (15%) Query: 37 GARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEP 96 R L DEI +++AG+ G GGA F T +K + P + +++ N E EP Sbjct: 112 SPRPDWEDLPADEIRRIIREAGIVGMGGACFPTAVKLTPPP---DKKVDHVIINGAECEP 168 Query: 97 GTYKDRLLMEQLPHLLVEGMLISAFAL-KAYRGYIFLRGEYIEAAVNLRRAIAEATEAGL 155 D LM + ++ G+ I+ + +G + L +A +R + Sbjct: 169 YLTCDDRLMRERGDRVLLGLQIALKLFPQGVKGVVALEDNKPKAIEAMRGYLDRLAIQ-- 226 Query: 156 LGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTC 215 + V +Y G E LI ++ GR PA Sbjct: 227 ------------NVTVQPVRTKYPQGAEKMLIYAVTGREV--------PAGGLPADVGCI 266 Query: 216 VNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREIL 274 + NV T + + + +++ SG +K P + G + RE++ Sbjct: 267 ILNVRTAYAI----------WDAVVNRMPVIDRIVTVSGDAIKEPKNLGVRLGMSVRELI 316 Query: 275 EDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEIN 334 E G + LK GG + + L++P+ GT+ +A Sbjct: 317 EACGGFSVEPLK---VIMGGPMMG-VALSDLNVPVVK----------GTSGILAFSEA-- 360 Query: 335 MVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPG 394 L E+C C C P + L E + + E+L Sbjct: 361 -------LARLGEEENCIRCGKCVSTCPMGL--LPYQLNAEVLRRNYDEFERLGGMNCIE 411 Query: 395 KTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFS 428 CA+A A L + + + A ++ + Sbjct: 412 CGCCAYACPARRHLTQSCRDGKRTILARRRKGGA 445 >UniRef50_Q52716 Electron transport complex protein rnfC n=9 Tax=Bacteria RepID=RNFC_RHOCA Length = 519 Score = 273 bits (698), Expect = 9e-72, Method: Composition-based stats. Identities = 76/426 (17%), Positives = 135/426 (31%), Gaps = 71/426 (16%) Query: 4 IIRTPETHPL-TWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGR 62 + P+ T +R D + W G R +P+EI QV AG+ G Sbjct: 99 VAPHASGLPVPTITIRPDGEDKW--------GPHLPRLRPENAAPEEIAAQVAAAGIVGM 150 Query: 63 GGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFA 122 GGA F + +K +L K + + L+ N E EP D LM + + +G+ I A A Sbjct: 151 GGATFPSAVKLNLRAKYD---LTTLIINGAECEPYLTCDDRLMRERAEEIADGIGIMARA 207 Query: 123 LKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGE 182 L + ++ + +A + R + +H +Y G Sbjct: 208 LGVKQVFVAIESNKPQAIEAMTR---------------YNRALGYTFKIHVVPTQYPMGS 252 Query: 183 ETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKS 242 E L+ + G+ PA + V+N+ T V + G Sbjct: 253 EKHLVKMITGQE--------TPARALTADLGVVVHNIATAHAVHLAVRYGEPLIA----- 299 Query: 243 KDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLT 301 + + SG ++ P + GT EI+ G + + GG Sbjct: 300 -----RTVTVSGHGIRRPANLRVLIGTPVSEIIAHCGGFTEEPDRL---LLGGPMMGM-P 350 Query: 302 EAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGL 361 + +P+ GT +A+ + C C C G Sbjct: 351 IQNPRVPVVK----------GTNGILALTAAETPEAKT---------MPCIRCGRCVQGC 391 Query: 362 PWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEA 421 P + GD+E ++ C++ A PL + ++ + + Sbjct: 392 PVGLTPFE--LNARIHAGDLEGAAKVGLMDCLACGCCSYNCPANLPLVQSFQFAKGKLSE 449 Query: 422 GIKQPF 427 + Sbjct: 450 RQSRKH 455 >UniRef50_A3WQG7 Electron transport complex protein RnfC n=1 Tax=Idiomarina baltica OS145 RepID=A3WQG7_9GAMM Length = 624 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 80/431 (18%), Positives = 140/431 (32%), Gaps = 77/431 (17%) Query: 1 MKNIIRTPETHPLTW-----RLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVK 55 +K I + P +H + D + W + E+++ ++ Sbjct: 90 VKAIEQRPMSHASGLPEQAIVITPDGEDKWRER--------QPLPDYQQRDKAELLDIIQ 141 Query: 56 DAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEG 115 AG+ G GGAGF T K + + YL+ N E EP D LM + +V G Sbjct: 142 AAGVAGLGGAGFPTSQKLAQ-----QKPVSYLIINGVECEPYICADDRLMREHARDIVLG 196 Query: 116 MLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGA 175 M I A+ + + + EA ++R AIAE ++ + Sbjct: 197 MRILAYITGTDKTLLAIEDNKPEAIDSMRAAIAEY----------------DDIELRIVP 240 Query: 176 GRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEW 235 +Y G E LI L G P+ + NV T V + + Sbjct: 241 TKYPSGGEKQLIQLLTGHEV--------PSKQLPIEMGIIMQNVGTAFAVKEAVID---- 288 Query: 236 YQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGG 294 K +++ +G ++ PG P GT +LE + + GG Sbjct: 289 ------DKPLIERVVTLTGECIEQPGNVWSPLGTPVDALLEYAG---FKPEQQQRVIMGG 339 Query: 295 AGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWC 354 F LP+ + K + + +V R L +C C Sbjct: 340 PMMGFT------LPITAVPVIKTTNCI-------------LVPSTRELPPPGDEMACIRC 380 Query: 355 TPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKY 414 C + P +++ + + + D LE+ F CA + PL + Sbjct: 381 GACAEVCPATLQPQQLQWLAKAK--DYPALEENNLFDCIECGACAFVCPSEIPLVHYYRQ 438 Query: 415 FREEFEAGIKQ 425 + + ++ Sbjct: 439 AKSQMRNQARE 449 >UniRef50_Q67JR5 NADH dehydrogenase subunit n=1 Tax=Symbiobacterium thermophilum RepID=Q67JR5_SYMTH Length = 394 Score = 271 bits (693), Expect = 4e-71, Method: Composition-based stats. Identities = 133/397 (33%), Positives = 193/397 (48%), Gaps = 23/397 (5%) Query: 23 PVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGF--STGLKWSLMPKDE 80 L YR++ GY G A ++ QV AGL+GRGG+G G KW + Sbjct: 13 REDLAAYRARGGYAGLEAA-RTRGSGWVLEQVTRAGLRGRGGSGDGRPIGQKWQRVAAS- 70 Query: 81 SMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAA 140 + RY++ NA E + + KDR L+ + PH ++EG+LI+A AL A Y+++RG+ EA Sbjct: 71 RVPERYVVANAAESQAVSRKDRYLLARFPHRVLEGLLIAAQALGAREAYLYVRGDSPEAL 130 Query: 141 VNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSK 200 R A+AEA AGLLG + V A + GEETA++++LEG P+ K Sbjct: 131 DGARDAVAEAGAAGLLG--------GVSVTVQPSAPTAVSGEETAILDALEGLEGYPQPK 182 Query: 201 PPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPG 260 PP P G G+PT V N E+L V A+ GV+ + + GT L +G V PG Sbjct: 183 PPRPEEIGLRGRPTLVQNAESLAAVAALFRLGVDRVRAVGTPTCPGTALFTVTGAVDRPG 242 Query: 261 LWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSR 320 ++E+P GT ++L R+ + A PGG G+ L LD+P+ +E + GS Sbjct: 243 VYEVPHGTPLAQLLALAGAPPRE--EILAVLPGGLGSGPLRPDELDVPLTYEDLAALGSS 300 Query: 321 LGTALAMAVDH-EINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPG 379 LG + + + + LVR AR SCG C CR+G +LRALE G+ Sbjct: 301 LGNSAVVVFRRADATLPDLVRENVALLARGSCGQCRGCREG---HEGLLRALEAGDATE- 356 Query: 380 DIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFR 416 + L G+ CA G A++ F Sbjct: 357 ----ARRRAEVLLYGRGNCAFPTGTARFALRALQEFP 389 >UniRef50_A1WT48 Electron transport complex, RnfABCDGE type, C subunit n=3 Tax=Proteobacteria RepID=A1WT48_HALHL Length = 448 Score = 271 bits (693), Expect = 4e-71, Method: Composition-based stats. Identities = 77/417 (18%), Positives = 140/417 (33%), Gaps = 68/417 (16%) Query: 1 MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLK 60 + R P+T + R V + L LS +E+V ++DAG+ Sbjct: 91 LMPTARGPKTEAILLRTAPGDSQVV---------RWSRERTLEALSGEELVEAIRDAGIV 141 Query: 61 GRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISA 120 G+GGA F T LK+++ E + L+ N E EP D LM + +++G+ ++ Sbjct: 142 GQGGASFPTHLKFAVP---EGYTVDTLVVNGCECEPFLSADHRLMVEATDSIIDGVRLAM 198 Query: 121 FALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYIC 180 A+ A I + + + + + V +Y Sbjct: 199 RAVGAPEAVIGVEDNKPD----------------AVAALQAAVAGEDAIRVVQLKSKYPQ 242 Query: 181 GEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNIS 240 G E LI +L R P+ + VNN+ T+ + +L G Sbjct: 243 GSEKMLIKALLDREV--------PSGGLPYEIGAVVNNIGTMAQLGYLLPRGEGL----- 289 Query: 241 KSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDF 299 +++ +G V+ PG + +P GT R +LE+ +G GG Sbjct: 290 -----IERVITVAGPGVERPGNYRVPVGTPLRYLLEEVG---FEGDDPSRIILGGPMMG- 340 Query: 300 LTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRD 359 T A LD+P+ G + + + + E + C C C + Sbjct: 341 NTVAFLDVPITK----------GVSGVLVLPEG------AGDESEQPPTQPCIRCGRCVE 384 Query: 360 GLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFR 416 P + + + E+ C++ + PL + + Sbjct: 385 VCPVGLNPAELGRLAAKRQYAVME-ERFHLNDCFECGCCSYVCPSNIPLVQYFRIAK 440 >UniRef50_B2A142 Electron transport complex, RnfABCDGE type, C subunit n=3 Tax=Clostridia RepID=B2A142_NATTJ Length = 441 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 84/424 (19%), Positives = 142/424 (33%), Gaps = 74/424 (17%) Query: 10 THPL-----TWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGG 64 THP+ T + +D + +Y G + ++ DEI +V AG+ G GG Sbjct: 86 THPIGEKANTIIIENDGKDEL--DYEESEGLDSP----DNITADEIKEKVNAAGIIGMGG 139 Query: 65 AGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALK 124 A F T +K S D+ I ++ N E EP D +M + ++ G+ A+ Sbjct: 140 AAFPTHIKISP---DKEKPIDTVILNGAECEPYLTTDYRMMLEAEDYVLFGLRAIMKAVN 196 Query: 125 AYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEET 184 G I + +A ++ +A+ D L V +Y G E Sbjct: 197 CENGVIAIENNKPQAIEKMQNIVAD----------------DDRLQVMIFESKYPQGAEK 240 Query: 185 ALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKD 244 LI ++ GR P+ VNNV T + + +K Sbjct: 241 QLIKTVTGREV--------PSGGLPMDVGCIVNNVGTAVAIAEAIK----------LNKP 282 Query: 245 AGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEA 303 + ++M +G + PG + + GT A I+ + G + K GG Sbjct: 283 SYERVMTVTGPGINRPGNFLVRIGTLASHIISECGGAKENT---KKVIMGGPMMGLSQPT 339 Query: 304 HLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPW 363 +EF I GT+ + + V F + C C C D P Sbjct: 340 -----VEFPVIK------GTSGILLLTGSEVKV---------FEEKPCINCGRCVDDCPA 379 Query: 364 SVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGI 423 + L + + G + E C + A PL I+ + + Sbjct: 380 YL--LPNVIAHYMENGRVNESEDYNAMDCIECGCCTYICPANRPLVHYIRMAKADIMKKR 437 Query: 424 KQPF 427 ++ Sbjct: 438 EKEG 441 >UniRef50_B0VFP0 Electron transport complex protein rnfC, NAD and 4Fe-4S binding subunit (RnfC) n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFP0_9BACT Length = 439 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 75/417 (17%), Positives = 127/417 (30%), Gaps = 74/417 (17%) Query: 1 MKNIIRTPETH---PLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDA 57 + I R P + ++ D W++ N L +E+ ++ +A Sbjct: 82 VTAINRFPNATGSSSMAIQITGDGSDKWIELVDEPN--------FMDLPLEEMKKRIGEA 133 Query: 58 GLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGML 117 G+ G GGAGF T +K S I ++ N E EP D LM + ++ G+ Sbjct: 134 GICGMGGAGFPTLVKLSPPA---DKPIDTVILNGVECEPYLTSDHRLMLEKGEEIIIGLK 190 Query: 118 ISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGR 177 + L A +G I + +A ++ T + + V R Sbjct: 191 LIMKILSAKKGMIGIEANKPDAIAKMQE----------------LTKNEPHIEVVPLKLR 234 Query: 178 YICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQ 237 Y G E LI + R+ PA V NV T + Y+ Sbjct: 235 YPQGAEKQLIYAATKRKV--------PAGGLPLEVGIVVQNVGTAFAI----------YE 276 Query: 238 NISKSKDAGTKLMGFSG-RVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAG 296 I K +++ +G V P GT E+++ G + GG Sbjct: 277 AIRYQKPLIQRVITVTGSPVTKPQNLLARIGTPFSELVDFCGGTKEE---VGKVICGGPM 333 Query: 297 TDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTP 356 F +A G+ + ++ E +C C Sbjct: 334 MGFALPT-----------LEATVGKGSGGLVLMNTED---------ARLNEEGNCLRCAR 373 Query: 357 CRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIK 413 C D P ++ + + + L + CA+ A L I Sbjct: 374 CVDVCPLNLVPCMIVSAVKYDNQKLAVRSGLNDCMK--CGACAYVCPAQIRLVQYID 428 >UniRef50_D2RN96 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RN96_ACIFE Length = 455 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 77/417 (18%), Positives = 145/417 (34%), Gaps = 66/417 (15%) Query: 14 TWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKW 73 +++D Q ++ + ++ ++PD I +++ G+ G GGA F T +K+ Sbjct: 98 CVVIKNDGQDTLCEDIKP--------RSEEEITPDLIRQVLREKGIAGMGGATFPTAVKY 149 Query: 74 SLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLR 133 + PK+ I +L N E EP D + + +++G+ A A +G I + Sbjct: 150 AP-PKEGHCPIDTILLNGIECEPFVTADHRTLLEYADEIIQGLKYFMLASGAAKGIIGIE 208 Query: 134 GEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGR 193 +A +++ +A + + V +Y G E LI + GR Sbjct: 209 DNKPDAIELMQKKVA----------------GEANIEVCVCKEKYPQGSEKHLIYAATGR 252 Query: 194 RANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFS 253 R P V+NV T + N + Y +++ S Sbjct: 253 TVPDRGLPA--------DVGVIVDNVGTAVAACRAVKNNIPLY----------ERVVTIS 294 Query: 254 GR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFE 312 G V PG + + GT + +E AGG++ GG F + LD P+ Sbjct: 295 GDGVNKPGNYIVRLGTLFSDAVEKAAGGLKGDP--GKIVAGGMMMGFAVNS-LDYPITK- 350 Query: 313 SIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALE 372 G++ + + + ++ + C C C D P ++ ++ Sbjct: 351 ---------GSSGLLIFNSKSP-------FAQYVEPDPCVHCARCVDACPMKLEPTEIVQ 394 Query: 373 RGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSN 429 + Q D + C CA A PL I+ ++ + Sbjct: 395 AVKKQNWD-DAERFFCHA-CIECGSCAFVCPAHIPLVQYIRMGKQFIRGKGDGGHNP 449 >UniRef50_A9L0J9 Electron transport complex, RnfABCDGE type, C subunit n=16 Tax=Shewanella RepID=A9L0J9_SHEB9 Length = 888 Score = 267 bits (682), Expect = 6e-70, Method: Composition-based stats. Identities = 73/441 (16%), Positives = 134/441 (30%), Gaps = 74/441 (16%) Query: 1 MKNIIRTPETHPLTW-----RLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVK 55 + I H + D + W + + + L LS +IV++V+ Sbjct: 89 IVAIEPRASNHASALPVNTCVIAADGKDTWCELVQHQ---------LDDLSNQQIVDKVR 139 Query: 56 DAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEG 115 AG+ G GGA F T +K + + I ++ N E EP D LM + ++ G Sbjct: 140 SAGIAGMGGAAFPTHIKLNPV-----SEIDLVIINGVECEPYISADDRLMREYSQDILAG 194 Query: 116 MLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGA 175 + I L R I + EAA ++ A+++ + V Sbjct: 195 IGIIHRLLTPKRIVIAIEDNKPEAAKAMQAAVSQCGLPAG------------SIRVTVIP 242 Query: 176 GRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEW 235 +Y G E LI + GR P+ + V+NV T + + G Sbjct: 243 TKYPSGGEKQLIQIITGREV--------PSGAIPAKLGIVVHNVGTAYAINQAVTQG--- 291 Query: 236 YQNISKSKDAGTKLMGFSG-RVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGG 294 K +++ +G V PG + LP GT +L K GG Sbjct: 292 -------KPLVERVVTVTGTNVGKPGNYWLPIGTPVDHVLTATEFTPEPDQK---VIIGG 341 Query: 295 AGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWC 354 ++ +P+ + +V + + ++C C Sbjct: 342 PMMGHALA-NIQVPILKGT------------------NCILVPSSQEIGSTPEEKACIRC 382 Query: 355 TPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKY 414 C P + L + + + C++ + PL + Sbjct: 383 GECATACPALL--LPQQLFWHAKAEEYDKAASYNLKDCIECGCCSYVCPSDIPLVEYYRI 440 Query: 415 FREEFEAGIKQPFSNTHLING 435 + + + Sbjct: 441 AKSALKQAADEKQQAERAKQR 461 >UniRef50_A1SSX3 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SSX3_PSYIN Length = 857 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 86/445 (19%), Positives = 144/445 (32%), Gaps = 74/445 (16%) Query: 1 MKNIIRTPETHPLTWR-----LRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVK 55 + I + + HP + D + Y+ Y+ AL +++ ++ Sbjct: 96 VYAIEKRTDLHPSGLAVLSIVIETDGLDRSIA-YKKPQDYQTQPAAL-------LIDLIQ 147 Query: 56 DAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEG 115 +G+ G GG GF + LK S ++ L+ NA E EP D LM++ L+ G Sbjct: 148 QSGIIGMGGGGFPSHLKLSNAHN-----VKLLIINAIECEPYITADDRLMQEHADQLITG 202 Query: 116 MLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGA 175 + I LK + +A + AI +A E+ L V A Sbjct: 203 IEILQHILKPTLTIFAIEDNKPQAIAAINLAIKQAPESLQK-----------NLRVSIIA 251 Query: 176 GRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEW 235 RY G E LI + G++ P + NV T+ V + +G Sbjct: 252 TRYPSGGEKQLIEMITGQQI--------PLGQHPTALGIVMYNVGTVFAVKEAIIDG--- 300 Query: 236 YQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGG 294 K ++++ +G K G + GT + +LE Y + + GG Sbjct: 301 -------KPLISRIVTLTGDAFKKKGNANVRIGTPIQYLLEQYG---LEKKHVQKLLIGG 350 Query: 295 AGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWC 354 F T H D+P+ +V + E A C C Sbjct: 351 PMMGF-TITHTDIPVSKSC------------------NCILVPTPEEMPEPPAEMPCIRC 391 Query: 355 TPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKY 414 C D P + L + D E L++ CA + PL + Sbjct: 392 GECSDVCPAVL--LPQQLLWYSKSQDHEKLDEYNLPSCIECGACAFVCPSNIPLVEYYRV 449 Query: 415 FREEFEAGIKQPFSNTHLINGIQPN 439 + E + + I+ Sbjct: 450 AKAEIRN--ARQEAQKAETARIRHE 472 >UniRef50_Q0TQI8 Electron transport complex, RnfABCDGE type, C subunit n=8 Tax=Clostridium perfringens RepID=Q0TQI8_CLOP1 Length = 436 Score = 265 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 71/378 (18%), Positives = 129/378 (34%), Gaps = 65/378 (17%) Query: 40 KALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTY 99 K + LS ++V VKD G+ G GGA F +K ++ E I+Y++ NA E EP Sbjct: 114 KYSSELSLKDVVKLVKDYGIVGLGGATFPCHVKLNV---KEDKEIKYIIINAAECEPYLT 170 Query: 100 KDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKN 159 D +M + ++ G+ I YI + + A + + E Sbjct: 171 CDHRVMLEYTEEIISGLRILLELFPKALIYIGIEDNKLNAIDKFKSILGE---------- 220 Query: 160 IMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNV 219 D ++ V +Y G E LI +L + P+ V NV Sbjct: 221 ------DNKIKVMPLKSKYPQGSEKHLIYALTKLQV--------PSGKLPLDIGCIVFNV 266 Query: 220 ETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYA 278 T+ + Y ++ +++ +G +++P + GT ++I+E Sbjct: 267 STIYQL----------YASLINGLPLTERIITVTGDSIRSPKNLRVKIGTPVKDIIEFCG 316 Query: 279 GGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSL 338 G + K GG LDLP+ GT+ + + Sbjct: 317 GFINKPNK---IILGGPMMG-TAINSLDLPITK----------GTSGILCLSK------- 355 Query: 339 VRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFC 398 + F + C C C + P ++ + E ++ E L C Sbjct: 356 ----VDDFPKSHCIRCGKCLNSCPMNLIPQKLNEL--ALKDKLDEFEFLGGMDCLECGCC 409 Query: 399 AHAPGAVEPLQSAIKYFR 416 + A + + I+ + Sbjct: 410 TFSCPAKISIVNNIRNAK 427 >UniRef50_B0S407 Electron transport complex protein n=2 Tax=Finegoldia magna RepID=B0S407_FINM2 Length = 442 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 81/419 (19%), Positives = 155/419 (36%), Gaps = 64/419 (15%) Query: 11 HPLTWRLRDDKQPVWLD-EYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFST 69 + + V ++ + ++ GY T LS + I+ ++K+AG+ G GGAGF T Sbjct: 86 EQMVLSNGQKGEVVVIESDGLNELGYTETNDDFTQLSKEVILERIKEAGIVGLGGAGFPT 145 Query: 70 GLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGY 129 LK + K + I ++ N E EP D+L ME P + G+ I + +GY Sbjct: 146 HLKMN---KKPDVKIEQVILNGAECEPYLTSDQLNMELYPQKAIGGLKIIMKLMDCDKGY 202 Query: 130 IFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINS 189 I + +A L+ A + + + + +Y G+E LIN+ Sbjct: 203 IGVEDNKQKAIGILKNAAKDEK----------------NISICSVKTKYPQGDERRLINA 246 Query: 190 LEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKL 249 + G++ SK G G N+ + + Y + S ++ Sbjct: 247 ITGKKI---SKAQRSNERGVQGL-----NISSAMAI----------YDAVVHSIPLTHRI 288 Query: 250 MGFSG-RVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLP 308 + +G +K P +P GT +++++ G K GG Sbjct: 289 VTMTGSAIKEPKNIYVPVGTKFKDLVDYCDGFKETPYK---IVVGGPMMGACQYN----- 340 Query: 309 MEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKIL 368 +A + T + ++ + ++ + E C C C D P + +L Sbjct: 341 ------LEAPTVKTTGGIICMNEKDATLA---------SPEPCIKCAKCVDVCP--IGLL 383 Query: 369 RALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPF 427 + + GD E E++ C++ + PL AI + + + +A ++ Sbjct: 384 PLFLQLKSLNGDFEGAEKMHLNDCIECGTCSYICPSNRPLVEAIVHAKTQLKAQQRKRG 442 >UniRef50_C5BT99 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BT99_TERTT Length = 505 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 81/427 (18%), Positives = 138/427 (32%), Gaps = 76/427 (17%) Query: 1 MKNIIRTPETHPLTWR-----LRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVK 55 + +I HP + + D + W+D S + Y+ P + N+V Sbjct: 85 VVDIAEIMAPHPSGLKSTAIIIDTDGEDRWIDTGVSGDPYDE--------EPLTLANRVA 136 Query: 56 DAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEG 115 +AG+ G GGA F +K + E I+ +L N E EP D LM + +VEG Sbjct: 137 NAGIVGMGGAIFPAAVKLKQGTRHE---IKTVLVNGSECEPFLTCDDRLMREKAEEIVEG 193 Query: 116 MLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGA 175 + L+AY+ I + EA +R A + V Sbjct: 194 ARLIRHILRAYKAVIAIEDNKPEAIAAMRAAAEPYGM----------------VEVEAVP 237 Query: 176 GRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEW 235 Y G LI + GR PA + + V+NV T+ + L G Sbjct: 238 SMYPMGSAKQLIQEITGREV--------PAGARSTSVGVLVHNVGTVYAIHQALTYG--- 286 Query: 236 YQNISKSKDAGTKLMGFS-GRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGG 294 + ++++ + G + P GT + +++ G D K GG Sbjct: 287 -------RPLVSRIVTVAGGAINRPRNVNALVGTPVQHLIDACGGLNGDPAKL---ILGG 336 Query: 295 AGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWC 354 G L + + +++L ++ C C Sbjct: 337 PMM--------------------GVPLLSTQVPTIKGATGVLALAKHEVPRSEASPCIRC 376 Query: 355 TPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKY 414 C + P + L + D E + CA+ + PL +Y Sbjct: 377 ASCVEACPMGLLPLE--MAARSRADDFEGADDYGLRDCILCGSCAYVCPSHIPLVQYFQY 434 Query: 415 FREEFEA 421 + E +A Sbjct: 435 AKGEQDA 441 >UniRef50_D1PFH3 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Prevotella copri DSM 18205 RepID=D1PFH3_9BACT Length = 450 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 87/397 (21%), Positives = 135/397 (34%), Gaps = 63/397 (15%) Query: 17 LRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLM 76 + + + W + + E A L+P+EIVN++K AGL G GGAGF T +K Sbjct: 98 IINVEGDEWEESIDRSDKLETLE-AHAELTPEEIVNRIKVAGLTGMGGAGFPTFIKLCPP 156 Query: 77 PKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEY 136 P ++ N E EP D LM + ++ G+ + A + +GYI + Sbjct: 157 P---GAKAECVIINGVECEPYITADYRLMMEHADEILVGLNLLMKAAQVEKGYIGIEDNK 213 Query: 137 IEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRAN 196 A A D + + A +Y G E L++++ R+ Sbjct: 214 PAAIKLFEEKTAN----------------DARIEIVPLAKKYPQGGEKQLVDAVIRRQVP 257 Query: 197 PRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR- 255 P P GA V NV T V YQ + K+K + +G+ Sbjct: 258 AP--PAIPVNVGA-----IVQNVGTAFAV----------YQAVMKNKPLFERYTTVTGKQ 300 Query: 256 VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIG 315 VKNPG + + GT +++E+ G K GG + LD+P+ Sbjct: 301 VKNPGNFLVRMGTPFSQMIENCGGLPEGDNK---VLAGGPMMGKAVIS-LDVPVTK---- 352 Query: 316 KAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGE 375 GT + + C C C D P ++ L Sbjct: 353 ------GTNSITVLTDADAHRKKA---------QPCIRCAKCVDACPMGLEP--YLLATL 395 Query: 376 GQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAI 412 D E LE C + P+ I Sbjct: 396 SVVKDYERLEAEEVTSCIACGSCQFTCPSHRPILDNI 432 >UniRef50_A3DI53 Electron transport complex, RnfABCDGE type, C subunit n=4 Tax=Clostridium RepID=A3DI53_CLOTH Length = 439 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 85/418 (20%), Positives = 137/418 (32%), Gaps = 64/418 (15%) Query: 12 PLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGL 71 P+ + V + + YEG K + + E ++ ++++GL G GGAGF + Sbjct: 85 PMLFAGGIYVTAVEIKTDGKQEIYEGI-KPPSFSNSKEFISAIRESGLVGLGGAGFPAHV 143 Query: 72 KWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIF 131 K S P I L+ NA E EP D + + +V G+ I L I Sbjct: 144 KLSPPP---DKKIDTLIINAAECEPYITSDYREIIENSWNVVSGINIIMEILGIENVLIG 200 Query: 132 LRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLE 191 + EA + R A D + V RY G E LI + Sbjct: 201 IEDNKPEAIKEMTRVAAT----------------DDRINVIKLKSRYPQGAEKMLIYATT 244 Query: 192 GRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMG 251 GR+ P P V NV ++ + + G+ + K + Sbjct: 245 GRKVPPGKLPA--------DVGVIVMNVNSVSFISEYIKTGMPLIK----------KRVT 286 Query: 252 FSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPME 310 G VK PG E+ GT E+ G G+ K GG + + LD P+ Sbjct: 287 VDGPSVKRPGNVEVLIGTPISEVFSFCGGF---GIVPKKILMGGPMMG-IAQYTLDTPV- 341 Query: 311 FESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRA 370 T +A D ++ ++C C C P ++ Sbjct: 342 ---------LKHTNALLAFDETTAVL---------PKEQACIRCGRCVRACPMNLLP--L 381 Query: 371 LERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFS 428 G+IE L + CA+ A L +I+ + + + + Sbjct: 382 YLNNNSIRGNIEELNRYHVMDCIECGSCAYVCPAKINLVQSIRLGKAQVRQAAAKGGN 439 >UniRef50_C5BNI0 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BNI0_TERTT Length = 747 Score = 263 bits (672), Expect = 9e-69, Method: Composition-based stats. Identities = 81/451 (17%), Positives = 139/451 (30%), Gaps = 79/451 (17%) Query: 1 MKNIIRTPETHP-----LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVK 55 + I P HP + D + W D ++ +S +E + +++ Sbjct: 83 VVAIESHPIPHPSGVNGPCIVIEPDHEDRWADLSPCED--------YRQISREECLARIR 134 Query: 56 DAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEG 115 + G+ G GGAGF +K + + I L+ N E EP D +LM + +V G Sbjct: 135 NGGVAGMGGAGFPAAVKLNP---RANQPIDTLILNGTECEPYITADDMLMREKADEVVAG 191 Query: 116 MLISAFAL-KAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTG 174 L+ A L I + EA +R+A V Sbjct: 192 ALLLAHLLGDPANILIGIEDNKPEAIDAMRKATE-----------------GTSANVVVF 234 Query: 175 AGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVE 234 +Y G E LI + GR+ P+ + V NV T + G Sbjct: 235 PTKYPSGGEKQLIEIVTGRQV--------PSGALPANIGIVVQNVGTARAAWRAVRYGEP 286 Query: 235 WYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPG 293 +++ GR + E+P GT +L+ + + G Sbjct: 287 L----------ISRITTVVGRSLAQQRNIEVPLGTPIVHVLKHHG---WNPEACARLIIG 333 Query: 294 GAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGW 353 G F E L + K + L + + ++C Sbjct: 334 GPMMGFTMENAL------APVVKTTNCLLAPSHEEMPAQPP-------------AQACIR 374 Query: 354 CTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIK 413 C C P +L Q D + L++ F C++ + PL + Sbjct: 375 CGMCAQACPA--SLLPQQMFWYAQSEDFDKLKEHNLFDCIECGACSYVCPSSIPLVQYYR 432 Query: 414 YFREEFEAGIKQPFSNTHLINGIQPNLLKER 444 + E K+ + ++ KER Sbjct: 433 ASKGEIRRLDKEK--EKSDRSRLRFEARKER 461 >UniRef50_Q5P537 Electron transport complex protein rnfC (Nitrogen fixation protein rnfC) n=11 Tax=Proteobacteria RepID=Q5P537_AZOSE Length = 508 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 83/425 (19%), Positives = 135/425 (31%), Gaps = 69/425 (16%) Query: 4 IIRTPETHPLT-WRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGR 62 + P P+ + D + W + + L P EI +V AG+ G Sbjct: 94 VAPHPSGLPVAAITIESDGRDEWTTLTACTDPFA--------LDPAEIGRRVSAAGIVGL 145 Query: 63 GGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFA 122 GGA F + +K S + N+ L+ N E EP D LM + ++G+ I A Sbjct: 146 GGAAFPSAVKLSGGRE---ANVDLLIINGGECEPFLSCDDRLMRERAADAIDGVAIMLHA 202 Query: 123 LKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGE 182 A I + E + ++ V RY G Sbjct: 203 TGAREARIGIEDNKPE----------------AIAAMRAAAAGHPKIRVEPVPTRYPMGS 246 Query: 183 ETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKS 242 E L+ +L G +P V+NV T V + G Sbjct: 247 EKHLVLALTGLEVPANGRPA--------DVGVVVHNVATAVAVRDAVRFG---------- 288 Query: 243 KDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLT 301 + ++L+ +G V+ PG E+ GT A E++E G D GG T Sbjct: 289 RPLVSRLVTVNGACVREPGNVEVLIGTLADEVVEFCGGLRADRGAPARLLLGGPMTGMQV 348 Query: 302 EAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGL 361 + L +P+ GT + +D + + C C+ C Sbjct: 349 PS-LRVPVIK----------GTGGILVLDGDEVGLRAPG---------PCIRCSTCVRAC 388 Query: 362 PWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEA 421 P + L R GD++ + CA+ + PL + + E A Sbjct: 389 PVGLLPLEIARRIGA--GDLDAAVKFGLKDCIACGCCAYDCPSHIPLVQYFHHAKGELAA 446 Query: 422 GIKQP 426 + Sbjct: 447 RDRHK 451 >UniRef50_A7FHZ3 Electron transport complex protein rnfC n=42 Tax=Gammaproteobacteria RepID=RNFC_YERP3 Length = 698 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 70/428 (16%), Positives = 131/428 (30%), Gaps = 78/428 (18%) Query: 1 MKNIIRTPETHPLTWR-----LRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVK 55 + I HP + D + W + + +++++ Sbjct: 89 ITAIAPHTTAHPSGLAELCVHITPDGEDRWRE--------QQPWADYRQRDKMALLDRIH 140 Query: 56 DAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEG 115 AG+ G GGAGF T K + I L+ NA E EP D LM++ ++ G Sbjct: 141 QAGIAGLGGAGFPTASKL----QGGLNGIITLIINAAECEPYITADDRLMQEHADEVITG 196 Query: 116 MLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGA 175 + I L+ + I + EA L+RA+ ++ + Sbjct: 197 IHILRHLLQPQQVLIGIEDNKPEAIAALQRALR----------------GQDDIHLRVVP 240 Query: 176 GRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEW 235 +Y G L L G+ P + + NV T+ + + + Sbjct: 241 TKYPSGGAKQLTKILTGKEV--------PFGKHSSSIGVLMQNVGTVVAIKRAVID---- 288 Query: 236 YQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGG 294 + +++ +G + +PG + GT +L+ ++ GG Sbjct: 289 ------DEPLIERVVTLTGDALSSPGNFWARIGTPVLYLLKLAGFKPQNP---PMVIMGG 339 Query: 295 AGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFA-RESCGW 353 F + LD+P+ S +++ +SC Sbjct: 340 PLMGFTLPS-LDVPIVKIS-------------------NCILAPAETEMGLSEPEQSCIR 379 Query: 354 CTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIK 413 C C D P + + G+ + L CA+ + PL + Sbjct: 380 CGLCVDACPAGLLPQQLYWFSRGEEHEKARNHNLFD--CIECGACAYVCPSNIPLVQYYR 437 Query: 414 YFREEFEA 421 + E A Sbjct: 438 QEKAEIRA 445 >UniRef50_Q3A7W8 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A7W8_PELCD Length = 437 Score = 263 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 73/426 (17%), Positives = 138/426 (32%), Gaps = 76/426 (17%) Query: 1 MKNIIRTPET---HPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDA 57 + + P L+ D VW + E +++ L+ +++++++A Sbjct: 80 VTAVEPRPHPCGTDLPAVVLKPDGDDVWAE--------EVQKQSFHVLTVAAMLDRIREA 131 Query: 58 GLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGML 117 G+ G GGA F + +K I ++ NA E EP DR + + ++ G+ Sbjct: 132 GVVGMGGAAFPSHVKLDPPR---DKTIDTVIVNAVECEPWLTADRRTLLERMEKVLTGIE 188 Query: 118 ISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGR 177 + A +I + +AA L + + + + Sbjct: 189 VLQKITDADHVWIGMEDNQPDAAALLAPHCRQRG-----------------IGLAVLPAK 231 Query: 178 YICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQ 237 Y G E LI ++ GRR R P V NV T+ + + Sbjct: 232 YPQGAERQLIYAVTGRRVPARGLP--------MDVGVLVQNVGTVAALTDAVTR------ 277 Query: 238 NISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAG 296 + +++ SG V +P + GT +LE + G + K GG Sbjct: 278 ----QRPLIERMVTVSGPGVVHPQNLRVRIGTPIAHLLE-HCGLRGEPAK---VLLGGPM 329 Query: 297 TDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTP 356 + L +P+ GT+ +A + + + SC C Sbjct: 330 MG-TAQHTLAVPV----------LRGTSGVLAFRRQDQTTAAIG---------SCVRCGR 369 Query: 357 CRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFR 416 C P + + + ++ E+ C+ A PL +I+Y + Sbjct: 370 CVAACPMHL--MPTFIADYARRDELALAERFAARNCIECGSCSFVCPAGIPLVQSIRYAK 427 Query: 417 EEFEAG 422 A Sbjct: 428 GAILAR 433 >UniRef50_C5BDE7 Electron transport complex protein rnfC n=215 Tax=Gammaproteobacteria RepID=RNFC_EDWI9 Length = 800 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 81/422 (19%), Positives = 136/422 (32%), Gaps = 71/422 (16%) Query: 2 KNIIRTPETHP-LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLK 60 + + P P L L D+Q W G ++P +++ + AG+ Sbjct: 94 RQVTAHPSGLPELCISLVPDQQDCW--------GERHPLPDYRAMTPPALIDHIHQAGIA 145 Query: 61 GRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISA 120 G GGAGF T K + + I L+ NA E EP D LM + +V G I + Sbjct: 146 GLGGAGFPTAAKLN----GGADRINTLIINAAECEPYITADDRLMREHAAEIVSGCAILS 201 Query: 121 FALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYIC 180 L R I + +A LR A+ ++ + +Y Sbjct: 202 HILAPERVLIGIEDNKPQAIAALRHALQCHE----------------KIQLRVIPTKYPS 245 Query: 181 GEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNIS 240 G LI L G P + + NV T+ + + +G Sbjct: 246 GGAKQLIKILTGMEV--------PHGRHSASIGVLMQNVATVYAIKRAVIDGEPL----- 292 Query: 241 KSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDF 299 +++ +G + PG GT + +L++ GG+ K GG F Sbjct: 293 -----IERVVTLTGEQMHRPGNVWAAIGTPVKHLLQN--GGLIAQNKHPMVIMGGPLMGF 345 Query: 300 LTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRD 359 T + L +P+ + + E ++ A + C C C D Sbjct: 346 -TLSRLGVPVVK---------ITNCILTPSRDEFSVPQ---------AEQPCIRCGACAD 386 Query: 360 GLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEF 419 P + + +G+ D L CA+ + PL + + E Sbjct: 387 VCPARLLPQQLYWFSQGKEHDKARGYHLQE--CIECGACAYVCPSNIPLVQYYRQEKAEI 444 Query: 420 EA 421 A Sbjct: 445 RA 446 >UniRef50_A0L5G6 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L5G6_MAGSM Length = 605 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 77/410 (18%), Positives = 131/410 (31%), Gaps = 71/410 (17%) Query: 7 TPETHPLTWR-LRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGA 65 P P+ L D + +D G +G + L P +I + V+ AG+ G GGA Sbjct: 95 HPSGLPMLCAVLDPDGEDRLID------GIQGCTDPFS-LEPAQIRDAVRHAGIVGLGGA 147 Query: 66 GFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKA 125 F + +K S + L+ N E EP D LME+ L+V G+ I AL Sbjct: 148 TFPSHVKLSPP---GEKKVELLVLNGVECEPYLTCDARLMEERSGLIVTGVRIMLHALHC 204 Query: 126 YRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETA 185 I + A ++RA+ + V Y G E Sbjct: 205 KEAVIGIEDNKPGAIAAMKRAVEGEK----------------NISVRVLPVMYPQGSEKQ 248 Query: 186 LINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDA 245 LI L GR+ P+ +N+ T + + +G+ + Sbjct: 249 LIEVLTGRQV--------PSGGLPIDVGVVCHNIATAIAIKEAIVDGMPLLK-------- 292 Query: 246 GTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAH 304 +++ +GR + P E GTT ++L+ G K GG ++ Sbjct: 293 --RVVTVTGRAINRPANVECLLGTTVGDLLKQCGGSRSSMAKL---VMGGPMMGVALQS- 346 Query: 305 LDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWS 364 A GT+ + ++ + C C C + P Sbjct: 347 ----------LAAPVVKGTSGLLVLE---------KQETTDNPEGPCIRCAKCVNVCPM- 386 Query: 365 VKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKY 414 ++ + + L F C++ + PL +Y Sbjct: 387 -SLMPNEMAWLAKNDQFDALADHDLFDCIECGTCSYVCPSSIPLVHYFRY 435 >UniRef50_C4FA62 Putative uncharacterized protein n=2 Tax=Collinsella RepID=C4FA62_9ACTN Length = 447 Score = 261 bits (667), Expect = 4e-68, Method: Composition-based stats. Identities = 77/401 (19%), Positives = 139/401 (34%), Gaps = 61/401 (15%) Query: 36 EGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEME 95 + A K T + +E + V+D+G+ G GGA F T W M E + +L+ NA E E Sbjct: 107 DPALKPPTYSNKEEFIACVRDSGMVGLGGASFPT---WFKMRAPEGKSFEFLVVNAMECE 163 Query: 96 PGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGL 155 P D M + +++G+ + AL+ I + EA + L+R + E Sbjct: 164 PYITSDYRQMMEHSERVIDGVFRTIEALEIPAAVIGVEDNKPEAILELKRVVKE------ 217 Query: 156 LGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTC 215 G + + V +Y G E LI + GR PA Sbjct: 218 -------KGREDRIEVMEIPTKYPAGGEKVLIKATTGRDV--------PAGGLPIDVGCL 262 Query: 216 VNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREIL 274 V NV T+ V G+ K + +G + NPG + +P G + R+++ Sbjct: 263 VVNVTTISRVEQYFRYGMPL----------TCKTVTVTGDCIANPGNYRIPLGMSVRDVI 312 Query: 275 EDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEIN 334 E G +++ K GG R T + + N Sbjct: 313 EATGGMVKEP---KKIIMGGPMMG---------------------RTITNIDCPILKANN 348 Query: 335 MVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPG 394 + + + +C C C P +++ D+ L++L Sbjct: 349 AIVALHDAAVLPDETACIRCGRCVRACPLALEPFALDSASRSH--DVVALDELAVMNCME 406 Query: 395 KTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLING 435 CA+ A + ++I+ + + + + + + Sbjct: 407 CGSCAYVCPAHRRITASIREGKAVYRGEVARLTAPSEKKEA 447 >UniRef50_Q1Q5X5 Conserved hypothetical iron sulfur protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q5X5_9BACT Length = 446 Score = 261 bits (667), Expect = 4e-68, Method: Composition-based stats. Identities = 70/430 (16%), Positives = 134/430 (31%), Gaps = 78/430 (18%) Query: 4 IIRTPETHPLTWR------LRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDA 57 + +P HP+ + + + W + + ++P+EI +V A Sbjct: 88 VDVSPYPHPVAGAKSLAVVIENSGEEEWAETL-------NVEQDTENITPEEIRQRVFSA 140 Query: 58 GLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGML 117 G+ G GGA F T +K + + I ++ N E EP D +M + ++EG+ Sbjct: 141 GIVGLGGATFPTHVKLTPP---KDKTIDTIVMNGAECEPYLTCDHYVMRNNANEVLEGLR 197 Query: 118 ISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGR 177 + + + +I + + L+ +A D + + + Sbjct: 198 LVMKCIGCKKAHIGIEANKKDVYELLKNTLA----------------GDPSIKIDLLEVK 241 Query: 178 YICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQ 237 Y G E LI +L R P P V NV T + + Sbjct: 242 YPQGAEHQLIKALLRREFKPTQLP--------MEAGAVVINVATAFAINNAVK------- 286 Query: 238 NISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAG 296 + +++ +G V P + GT R++LE + GG Sbjct: 287 ---YKRPLIERIITVTGNGVNKPQNLRVRIGTPVRDLLEITG----TSVGLNKIIFGGPM 339 Query: 297 TDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTP 356 + SI A + GT + + ++ + + +C C Sbjct: 340 MG----------IAQGSIDNAVTIKGTGGILVLKNQPH-----------YESHACIRCGR 378 Query: 357 CRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFR 416 C P+ + GE +I + C + A P+ IK+ + Sbjct: 379 CIVSCPYGLNPSELSIMGESM--NISLALENNVLECKECGCCTYICPAKRPIVHHIKFTK 436 Query: 417 EEFEAGIKQP 426 + Sbjct: 437 ALIAKQKTKK 446 >UniRef50_A5X3H0 HtxX n=1 Tax=Xanthobacter flavus RepID=A5X3H0_XANFL Length = 496 Score = 260 bits (665), Expect = 6e-68, Method: Composition-based stats. Identities = 118/392 (30%), Positives = 172/392 (43%), Gaps = 22/392 (5%) Query: 18 RDDKQPVWLDEYRSKNGYEGARKALTGLSPDE-IVNQVKDAGLKGRGGAGFSTGLKWSLM 76 R +YR+ GY R+ + ++ Q+ GR G GF G KW + Sbjct: 114 RPAPVARTFADYRAAGGYGQLRRVMADPGAAARMLAQLSAHQAVGRAGVGFPVGEKWRQV 173 Query: 77 PKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEY 136 + ++ N DE E +KDR ++E PH ++E L++A A ++++R +Y Sbjct: 174 MAAGGTPV--VIVNGDEGELAIFKDRFILETDPHGVLEAALVAARVTGADLVFLYVRDDY 231 Query: 137 IEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRAN 196 +RRA+ E AGL L + G +ICGEETALI SLEGR A Sbjct: 232 APIHAIVRRALEEVAAAGL--------AEGIGLELRRSGGAFICGEETALIASLEGRAAR 283 Query: 197 PRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRV 256 P +PPFP T G G+PT ++NVET + A G S D +L SGRV Sbjct: 284 PTERPPFPTTRGYLGRPTLLHNVETFYRLTAAW--GGTPGSPASVLLDPQVRLFSVSGRV 341 Query: 257 KNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGK 316 PG + G + L + AGGM++G GG+ + A P+ + Sbjct: 342 CAPGPKPVR-GLSRLADLVEIAGGMQNGHALGGLVIGGSSGTLVGAADCRRPLA--DLLA 398 Query: 317 AGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEG 376 G RLGT A+ + ++ + + ARESCG C PCR G + +IL A + Sbjct: 399 EGLRLGTGGAIVFGADDEPRAIAARMAAYLARESCGQCGPCRIGTAHAARILAAPGPLDL 458 Query: 377 QPGDIETLEQLCRFLGPGKTFCAHAPGAVEPL 408 + L +G G + CA A L Sbjct: 459 PLL-----DDLATVMGEG-SLCALGRNAGRFL 484 >UniRef50_C9A8J9 Respiratory-chain NADH dehydrogenase 51 kDa subunit n=3 Tax=Enterococcus casseliflavus RepID=C9A8J9_ENTCA Length = 445 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 74/401 (18%), Positives = 136/401 (33%), Gaps = 62/401 (15%) Query: 27 DEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRY 86 ++Y N + + + I+ +++ G+ G+GGA F T +K+S+ DE+ I Sbjct: 104 NDYAFDNDFLSTPFNWQSAANETILKKIRQGGIAGKGGATFPTHVKFSI---DENKKIHT 160 Query: 87 LLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRA 146 L+ N E EP D LM++ +++G I+ L + I + + A ++ A Sbjct: 161 LILNGSECEPFLRSDAFLMQKEAKKIIQGAKIAQKLLADPKIIIGIEDDKPLAISAMQAA 220 Query: 147 IAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPAT 206 AE D + V T Y G E L+ L + P Sbjct: 221 SAE----------------DDTIEVVTVPTVYPTGGEKQLVELLTDQEV--------PLG 256 Query: 207 SGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPF 266 + NV T + + K + +G V++P + + P Sbjct: 257 GLTADIGIVLINVATSFAIAEAVC----------YDKPLIERYTTVTGDVQHPRIVKNPL 306 Query: 267 GTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALA 326 GT A E+++ G K GG + L +P+ G+ Sbjct: 307 GTLAGELIDFAGGFQGAPSKL---ILGGPMMGKSVKT-LKVPVTK----------GSNGI 352 Query: 327 MAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQ 386 + + E + + +A C C C + P + + + + GD + E+ Sbjct: 353 VVFNEETDWL---------YAENPCIRCNKCVEACPMLLMPMEIDQF--YRAGDYQKCEE 401 Query: 387 LCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPF 427 L C A L + I + + K+ Sbjct: 402 LLAEACINCGACTFVCPAKRSLAANITAAKGKVAQLQKEAK 442 >UniRef50_Q5LC48 Electron transport complex protein n=41 Tax=Bacteria RepID=Q5LC48_BACFN Length = 445 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 69/384 (17%), Positives = 128/384 (33%), Gaps = 63/384 (16%) Query: 44 GLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRL 103 L+ +EIV ++ DAG+ G GGA F T +K P S ++ NA E EP D Sbjct: 120 ELTSEEIVKKIADAGIVGLGGACFPTQVKLCPPP---SFKAECVIINAVECEPYLTADHQ 176 Query: 104 LMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGT 163 LM + ++ G+ I A+K + +I + +A + + + Sbjct: 177 LMLEHAEEVMVGVAILMKAVKVNKAFIGIENNKPDAIQLMTKVASSYAG----------- 225 Query: 164 GFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLC 223 + V +Y G E LI+++ R+ + + V NV T Sbjct: 226 -----IEVVPLKVKYPQGGEKQLIDAITKRQVA--------SGALPISTGAVVQNVGTAF 272 Query: 224 NVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMR 282 V + + +++ +G+ V P + GT +++++ G Sbjct: 273 AVYQAVQKNKPLF----------ERVITVTGKSVAQPSNFLARIGTPMQQLIDACGGLPE 322 Query: 283 DGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNL 342 D K GG D+P G++ + ++ R Sbjct: 323 DTGK---IIGGGPMMGKALVNT-DVPTAK----------GSSGILIMN---------RKE 359 Query: 343 EEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAP 402 + ++C C C P ++ L + + E +E C Sbjct: 360 AKRGEVQNCIRCAKCVSACPMGLEP--YLLSALAENTEFERMESERIMDCIECGSCQFTC 417 Query: 403 GAVEPLQSAIKYFREEFEAGIKQP 426 A PL + + + A I+ Sbjct: 418 PANRPLLDYCRLGKGKVGAMIRAR 441 >UniRef50_C8WE25 Electron transport complex, RnfABCDGE type, C subunit n=3 Tax=Zymomonas mobilis RepID=C8WE25_ZYMMN Length = 487 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 76/433 (17%), Positives = 144/433 (33%), Gaps = 75/433 (17%) Query: 1 MKNIIRTPETHP-----LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVK 55 ++ I HP +T L D + W + + + P I +V Sbjct: 80 IRAIQNMTAPHPSGLPGMTMVLEADGKDSWAELPEAY-------SDPFAVDPQLIRERVA 132 Query: 56 DAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEG 115 AG+ G GGA F +K + I+ ++ N E EP D +M++ ++ G Sbjct: 133 WAGVVGLGGAAFPAAVKLE---QSSQKPIKMVVLNGAECEPYLTGDDRVMQEYADEVISG 189 Query: 116 MLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGA 175 + A A+ A + I + EA +++ AEA + + + Sbjct: 190 GRLIAHAVGAPKVVIGIERNKPEAIAIMKK-TAEAYD---------------NVEIADLP 233 Query: 176 GRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEW 235 +Y G L+ +L G + R++ V NV T V G Sbjct: 234 AQYPVGSARHLVQALTGLEISARTR--------IADVGVLVQNVGTARAVWRSARYGEPL 285 Query: 236 YQNISKSKDAGTKLMGFS-GRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGG 294 ++++ S G + +P + P G+ + +++ G K + GG Sbjct: 286 ----------ISRIVTVSGGGMNDPKTLDAPIGSPVKALIDFCGG---MNEKAEQIVTGG 332 Query: 295 AGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWC 354 + ++D+P+ GTA ++L + E+C C Sbjct: 333 PLMG-VGLPNIDVPVIK----------GTAGI---------LALTSEEMDHRPTEACLRC 372 Query: 355 TPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKY 414 C D P + + + +E +E+L C++ + PL Y Sbjct: 373 GRCVDVCPCGLSPVEMASLI--RRDKLEEVEKLQVMDCFSCGSCSYVCPSHLPLVQYFNY 430 Query: 415 FREEFEAGIKQPF 427 + E + Sbjct: 431 AKGEIWNRRDEER 443 >UniRef50_C0QFQ4 RnfC1 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFQ4_DESAH Length = 455 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 75/415 (18%), Positives = 133/415 (32%), Gaps = 65/415 (15%) Query: 12 PLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGL 71 + + ++QP + + + + + SPDEI + AG+ G GGA F T + Sbjct: 105 AIEIKTEGEQQPCN-ELWEEMTSTDWSLSTIPDYSPDEIARLIHAAGIVGLGGAAFPTHV 163 Query: 72 KWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIF 131 K + ++ I LL N E EP D LM++ PH +V G L++ A+ A +I Sbjct: 164 K---VMPNDKRLIDSLLVNGCECEPYLTCDYRLMKEAPHAIVAGALLAGRAVSAKEIFIC 220 Query: 132 LRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLE 191 + EA L A + + V +Y G E L+ ++ Sbjct: 221 IEDNKPEAIEALELATR-----------------NTVVQVAVVRTKYPQGSEKQLVKAVL 263 Query: 192 GRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMG 251 P ++NV T+ V + +++ Sbjct: 264 NLDVPLGGLPS--------DVGVALSNVGTMAAVARAVIKKGPL----------THRIVS 305 Query: 252 FSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPME 310 +G + P P G + E+++ G D + GG F + L P+ Sbjct: 306 VTGGGIVTPKNIFTPIGISMGELIDFCGGLTEDAAR---IIAGGPMMGFAF-SDLTTPVT 361 Query: 311 FESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRA 370 GT+ + H +C C C + P ++ R Sbjct: 362 K----------GTSGITILTHAETASG---------EETACVRCGRCVEACPMNLVPTRL 402 Query: 371 LERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQ 425 + Q C + A L I+ + + A +K+ Sbjct: 403 AMAARYKNT--ALARQYNINACFECGSCTYVCPANIKLVQLIRTGKAQVAAAMKR 455 >UniRef50_B4V5Q7 Oxidoreductase n=1 Tax=Streptomyces sp. Mg1 RepID=B4V5Q7_9ACTO Length = 481 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 96/406 (23%), Positives = 163/406 (40%), Gaps = 29/406 (7%) Query: 34 GYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNI--RYLLCNA 91 G+ AL D++++ + L+GRGGAGF K + + ++ NA Sbjct: 31 GHLTVHGALPQYRVDDLIDLAEAIDLRGRGGAGFPFHRKLRAVMRSARAKEGRSAVVVNA 90 Query: 92 DEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEAT 151 E EP KD L+ +PH++++G ++A AL A + + + + ++R AIAE Sbjct: 91 SEGEPSCLKDTALLLHVPHVVLDGAQLAADALGAEDVVVGVTRD--DVERSVRDAIAER- 147 Query: 152 EAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWG 211 G L V R++ GE T++IN +EG A P + + G G Sbjct: 148 ------------GPGTRLRVSRLPERFVTGEGTSMINGIEGNPAVPNGQKVRTSERGLTG 195 Query: 212 KPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAR 271 PT ++N ET + G Y ++ + GT ++ SG E+P GT+ Sbjct: 196 LPTLLSNTETYAQLAIAARLGAAGYNSVGLPAEPGTLMLTVSGATA----VEIPSGTSLA 251 Query: 272 EILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLP-MEFESIGKAGSRLGTALAMAVD 330 +LE G GG +LT + +S+ + LG + + Sbjct: 252 YVLELCGSSPGQG-----VLVGGYHGRWLTPEDASQALLSRQSLAAFDAVLGAGAVLPLP 306 Query: 331 HEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRF 390 + V + + A E+ G C PC GLP + + G G+ E +E R Sbjct: 307 EDTCPAGEVARVTRWMADETAGQCGPCVRGLPSLATAVEQMVAGGGRA-TFEAVEARMRA 365 Query: 391 LGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLINGI 436 + G+ C+H G + SA+ F +E ++ + Sbjct: 366 VR-GRGACSHPDGTSGFVASALNVFADELRDHALGSGCGRRVVGAL 410 >UniRef50_C4L9H6 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9H6_TOLAT Length = 483 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 74/381 (19%), Positives = 125/381 (32%), Gaps = 63/381 (16%) Query: 40 KALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTY 99 +A LS +E++N V++AG+ G GGA F T K L I L+ N E EP Sbjct: 108 RANNTLSREEMINLVEEAGIVGMGGAMFPTSDKLRLSMHYL---IDTLIINGSECEPYLT 164 Query: 100 KDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKN 159 D LM++ ++ G+ A + +I + EA + A+ +A + Sbjct: 165 CDDRLMQEQGDRIMGGIRYLQQITLADKVFIGIEENKPEAIAAME-ALCKAEK------- 216 Query: 160 IMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNV 219 + V Y G E LI ++ GR+ P+ + V NV Sbjct: 217 --------NMQVVGLPALYPMGSEKQLIEAVTGRQV--------PSGKLSADVGVLVQNV 260 Query: 220 ETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYA 278 T + L G + +++ SG V+ P P G EI+ Sbjct: 261 ATSIAIFEALRFG----------RPLTHRVITISGDAVEVPSNVMAPVGMPISEIVAQCG 310 Query: 279 GGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSL 338 G + GG + P+ GT+ + + + Sbjct: 311 GLKSTPAR---IVLGGPMMGRA-ITDIHAPVTK----------GTSGVLLLTEDE----- 351 Query: 339 VRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFC 398 +C C C P S+ L + E + + ++ C Sbjct: 352 ----LPNPKASACVRCGRCIGACPMSLTPLDMV--AELKVDNFGKAAEMGVMDCLLCGSC 405 Query: 399 AHAPGAVEPLQSAIKYFREEF 419 A+ A PL + ++E Sbjct: 406 AYVCPAAIPLTQYFDWGKQEV 426 >UniRef50_Q0F0I1 Electron transport complex protein RnfC n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F0I1_9PROT Length = 521 Score = 258 bits (658), Expect = 5e-67, Method: Composition-based stats. Identities = 76/447 (17%), Positives = 137/447 (30%), Gaps = 66/447 (14%) Query: 1 MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARK--ALTGLSPDEIVNQVKDAG 58 + I HP + ++ + P + + + G Sbjct: 92 VVRIEEYAIPHPSGMGMPSII----IESDGDDASDDSLEPITDWRNTDPALLRERARMCG 147 Query: 59 LKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLI 118 L G GGA F T +K +D I ++ N E EP D LM + ++ G+ I Sbjct: 148 LAGLGGAVFPTFIKL---VQDSRFPIETVVLNGIECEPWLTTDHRLMLEYADEILTGLAI 204 Query: 119 SAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRY 178 + I + +AA + +A+A L ++ G V RY Sbjct: 205 IMHMVNTDSAIIAIEDNKSDAAEAIEQALA-------LRDDLEGA------RVVLLPTRY 251 Query: 179 ICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQN 238 G E LI SL GR PA NV T + Y+ Sbjct: 252 PQGSEKQLIYSLTGREV--------PAGKLPMHIGMLCQNVATARAL----------YRA 293 Query: 239 ISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGT 297 + +++ +L+ SG + P + GT R + + GG Sbjct: 294 VVRAEPLTERLVTVSGDAMPRPANLHVRIGTPMRYVFAQQG---LTDFEDVRILHGGPMM 350 Query: 298 DFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPC 357 L H D+P+ T +A+ + ++C C C Sbjct: 351 GELLR-HPDVPVVKS----------TNGMLAMLE-------ASFMGGHTQEQACIRCGHC 392 Query: 358 RDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFRE 417 + P + + L + + E E F C++ + PL +Y + Sbjct: 393 SEACPAGL--VPNLLADQCRSDQFEKAESYDLFDCIECGACSYVCPSNIPLVHYFRYGKG 450 Query: 418 EFEAGIKQPFSNTHLINGIQPNLLKER 444 + ++ + + ++ + R Sbjct: 451 QIAQQRREK--SFAEASRLRSEAREMR 475 >UniRef50_C0R202 Electron transport complex protein n=2 Tax=Brachyspira RepID=C0R202_BRAHW Length = 435 Score = 257 bits (657), Expect = 6e-67, Method: Composition-based stats. Identities = 70/385 (18%), Positives = 119/385 (30%), Gaps = 65/385 (16%) Query: 39 RKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGT 98 +S +E+ +++ AG+ G GGA F T +K + N L+ N E EP Sbjct: 114 SSDYMSMSAEEMSKKIQQAGIVGMGGATFPTHVK---VDGAAKGNADTLIINGVECEPYI 170 Query: 99 YKDRLLMEQLPHLLVEGMLISAFALK-AYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLG 157 D LM + L +G+ I + R I + +A + + E Sbjct: 171 TSDYRLMIEYAQDLFKGIDILRKIVPSVKRTIIGIENNKPKAIEEMAKIGKEH------- 223 Query: 158 KNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVN 217 + V RY G E LI + GR P + V Sbjct: 224 ----------NVEVMALRLRYPQGAEKMLIEATTGRIV--------PVSKLPMDVGVIVV 265 Query: 218 NVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILED 276 N+ TL + Y+ ++K+K +L+ SG +K LP GT ++E+ Sbjct: 266 NIATLYAI----------YEAVAKNKPLMERLVTISGDAIKEHKNVWLPLGTPISHVVEE 315 Query: 277 YAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMV 336 G + + GG GT + +D + Sbjct: 316 CGGITAENV---LILSGGPMMGAAIPNLEQC-----------VNKGTNSLLFLDKDKLAK 361 Query: 337 SLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKT 396 + C C C + P + + + D L L Sbjct: 362 EV---------EYPCIKCGRCGNACPLHLSPTELAHTAKAKIKD--KLNDLDIATCFECG 410 Query: 397 FCAHAPGAVEPLQSAIKYFREEFEA 421 C + + PL I++ ++ Sbjct: 411 CCTYICPSKIPLVQWIRFGKDLLRR 435 >UniRef50_D2RYM8 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RYM8_9EURY Length = 565 Score = 257 bits (656), Expect = 6e-67, Method: Composition-based stats. Identities = 106/446 (23%), Positives = 171/446 (38%), Gaps = 40/446 (8%) Query: 6 RTPETHPL-TWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGG 64 TPE PL R R + W+D + L G PDE +++V+D GL GRG Sbjct: 130 PTPEDGPLSVGRRRVLGRCGWVDPASVPDESAAE---LAGDDPDEALSRVRDVGLLGRGR 186 Query: 65 AGF----STGLKWSLMPKDESMNIR---------YLLCNADEMEPGTYKDRLLMEQLPHL 111 + +W L + + ++ N +E + DR L+E P Sbjct: 187 GDWSVDDPVAEEWELAREAAAEGADEGDSEADEPVVVVNGNESDDRNATDRTLLEAAPGE 246 Query: 112 LVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFV 171 +++G L A + A ++ A + A A E + V Sbjct: 247 VLDGALAVAELVGADDVVVYCNENDDRARERVHEAARNAEERFAERLDRESGP-----EV 301 Query: 172 HTGAGRYICGEETALINSLEGR-RANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILA 230 G RYI GE T + ++EG R R +PP PA G +G+PT V+ T+ V L Sbjct: 302 VVGPDRYIAGEPTMALEAMEGNDRLEARLRPPSPAEHGLYGRPTIVHTPRTMAQVRRALL 361 Query: 231 NGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAW 290 E+ + D GT+L +G V ELP G + ++ E + +FK Sbjct: 362 APDEFDAD---DADPGTRLFTVTGDVDAAATVELPTGGSLADVRE----TVDLEGRFKMA 414 Query: 291 QPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGT-ALAMAVDHEINMVSLVRNLEEFFARE 349 GG F L + G+ LGT + ++ + +++ F E Sbjct: 415 CVGGQFGGFTRS----LSQSPSAPALEGAELGTEGVVELLNEDNCVLATAGRRANFAMEE 470 Query: 350 SCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQ 409 +CG C CR+G +LR + G+ Q + +L R +G + C A+ P Sbjct: 471 NCGRCVTCREGSQELTNMLRDIYDGQYQD---AKIRELTRVMG-ETSICQFGRTAIRPAV 526 Query: 410 SAIKYFREEFEAGIKQPFSNTHLING 435 + ++ F E A + + G Sbjct: 527 TGMREFEREVAAH-TEGRCPSGECEG 551 >UniRef50_C7GZP5 Na(+)-translocating NADH-quinone reductase, A subunit n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZP5_9FIRM Length = 448 Score = 256 bits (655), Expect = 8e-67, Method: Composition-based stats. Identities = 67/362 (18%), Positives = 118/362 (32%), Gaps = 61/362 (16%) Query: 48 DEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQ 107 + + V+ +G G GGA F T +K++ DE + L+ NA E EP D LM + Sbjct: 131 ESFIAAVRASGAVGLGGAAFPTHIKFNPKNIDE---VDTLIINAAECEPFITADHRLMLE 187 Query: 108 LPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDF 167 P +++G+ I+ + R I + A L I++ G Sbjct: 188 DPVDILDGIEITMRYMGIKRAIIGIESNKPNAIEVLNSEISKRKLDG------------- 234 Query: 168 ELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPA 227 + + RY G E L GR+ A + NV T+ + Sbjct: 235 -VSIKVLQSRYPQGAERVLAYEATGRK--------LDAGVLPADIGLIITNVATIAFIGQ 285 Query: 228 ILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLK 286 + NG+ K + G V P + GT ++++ G + Sbjct: 286 YMRNGIPL----------INKRLTVDGDAVNTPQNVIVAIGTPIKDLIAACGGYKKHP-- 333 Query: 287 FKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFF 346 K GG G + + + + +++ + Sbjct: 334 -KKILMGGPMM--------------------GRAIFSDELPIIKNNNAILAFADEDKFTM 372 Query: 347 ARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVE 406 C C C P+ +L A + D++TL +L C++ A + Sbjct: 373 PETPCISCGKCHQACPF--DLLPAAYYKAYKSQDVDTLNKLMINQCMECGSCSYVCPARK 430 Query: 407 PL 408 PL Sbjct: 431 PL 432 >UniRef50_Q482U5 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Colwellia psychrerythraea 34H RepID=Q482U5_COLP3 Length = 788 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 87/449 (19%), Positives = 148/449 (32%), Gaps = 77/449 (17%) Query: 2 KNIIRTPET-HPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLK 60 ++I P L L D + W + L LS EIV ++ +AG+ Sbjct: 96 MSVIAHPSGLSQLCVFLDVDGEDTWRKR--------NVCEDLEQLSNHEIVKKIANAGIA 147 Query: 61 GRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISA 120 G GGAGF T +K S +I++L+ N E EP D LLM + + +V+G+ I Sbjct: 148 GMGGAGFPTHIKVS-----SKPDIKFLIINGAECEPYITADDLLMMEQSNAIVDGIKILD 202 Query: 121 FALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYIC 180 L I + +A L++A A ++ V +Y Sbjct: 203 RLLTPTVILIGIEANKPKAIKALQKATAAIE----------------KIKVCIVPTKYPT 246 Query: 181 GEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNIS 240 G E L+ L G+ + + N+ T + + + + Sbjct: 247 GGEKQLVQILTGQEVK--------SGRLPIHDGIVMQNIATCFAINEAVRHDTPLIR--- 295 Query: 241 KSKDAGTKLMGFSG-RVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDF 299 +++ +G + P GT +LE + + K + GG F Sbjct: 296 -------RVVTVTGQALNKPQNVWALLGTPINFLLEQCSVEGIENQK-QPVIMGGPMMGF 347 Query: 300 LTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARES----CGWCT 355 + L +P+ S +V + + F +ES C C Sbjct: 348 SVSSEL-VPIVKTS------------------NCILVPSKKEMPSAFEKESNEVECIRCG 388 Query: 356 PCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYF 415 C D P ++L + + D LE+L CA+ + PL + Sbjct: 389 QCSDVCPS--QLLPQELQWSAKAKDYSQLEKLNLRDCIDCGACAYVCPSQIPLVHYYRIA 446 Query: 416 REEFEAGIKQPFSNTHLINGIQPNLLKER 444 + E +Q I+ K R Sbjct: 447 KAEIRE--QQQLDLKAEKAKIRFEARKLR 473 >UniRef50_C0WAW3 Electron transport complex protein n=1 Tax=Acidaminococcus sp. D21 RepID=C0WAW3_9FIRM Length = 447 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 76/388 (19%), Positives = 133/388 (34%), Gaps = 58/388 (14%) Query: 43 TGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDR 102 ++PD I +++ G G GGA F T +K++ PK+ + I +L N E EP D Sbjct: 111 EEITPDVIRTALREGGSVGLGGATFPTAVKYAP-PKEGARPIDTILLNGIECEPFITGDH 169 Query: 103 LLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMG 162 +M + +++G+ A A +G I + +A ++ +A Sbjct: 170 RIMLEWADEMIQGLKYFMMASGAQKGIIGIEDNKPDAIALVKEKVA-------------- 215 Query: 163 TGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETL 222 + + V A +Y G E LI + GR R P V+NV T Sbjct: 216 --SEPNIEVCVCAEKYPEGSEKHLIYAATGRTVPDRGLPA--------DVGVIVDNVGTA 265 Query: 223 CNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGM 281 ++ + Y ++ SG V PG + GT + +E AGG+ Sbjct: 266 VACYRMVKKNIPLY----------ERVTTISGDGVNKPGNYICRLGTLYSDAVELAAGGL 315 Query: 282 RDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRN 341 + + GG F T + LD P+ + + + E Sbjct: 316 KGTP--GKFISGGMMMGFSTPS-LDYPIAKW----------SGAVLIFNSESP------- 355 Query: 342 LEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHA 401 ++ C C C D P ++ ++ + + E E+ CA Sbjct: 356 FAQYVEPSPCVHCARCVDACPMKLEPTEIVQAVK--RQNWEEAERFSCHACVECGSCAFV 413 Query: 402 PGAVEPLQSAIKYFREEFEAGIKQPFSN 429 A PL I+ ++ + Sbjct: 414 CPAHIPLVQYIRMGKQFIRGKGHGGHNP 441 >UniRef50_A9BJD0 Electron transport complex, RnfABCDGE type, C subunit n=15 Tax=Bacteria RepID=A9BJD0_PETMO Length = 440 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 76/412 (18%), Positives = 138/412 (33%), Gaps = 69/412 (16%) Query: 16 RLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSL 75 + + + EY + + S +E++N VK AG+ G GGA F + +K S+ Sbjct: 97 AIVIKRTSEDIWEYIEHD------ENFKKFSKEELINIVKKAGIVGLGGAMFPSHVKLSI 150 Query: 76 MPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGE 135 + YL+ N E EP D ++M +++G+ I + + + Y+ + Sbjct: 151 PA---GKKVDYLIINGAECEPYITVDDMMMRTYTEEIIKGIKIIEYIVNPGKIYVGIEEN 207 Query: 136 YIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRA 195 EA ++ A+ + + V +Y G E LI S+ R Sbjct: 208 KPEAIKAMKNALK-----------------NENIEVAILKTKYPQGAEKQLIKSITKREV 250 Query: 196 NPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR 255 P+ V N+ T + + NG K + + SG Sbjct: 251 --------PSGGLPIDAGALVFNISTTYAIYDAVING----------KPLVERGITLSGG 292 Query: 256 VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIG 315 VK PG + GT ++L G+ + K GG T L ++DLP Sbjct: 293 VKKPGNYWFRIGTKVSDLLNQV--GLVEEEKIDRIIYGGPMTG-LPLPNIDLP------- 342 Query: 316 KAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGE 375 + G + E C C C P ++ + + Sbjct: 343 ---TFKGNNAITVLTKEEIPQK---------HEYPCIRCASCVKACPIGLQPYYLKKLAD 390 Query: 376 GQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPF 427 + DI ++ C++ + L K ++ +A I++ Sbjct: 391 ARKNDIA--QENGIMDCIECGACSYICPSNIDLVKTFKTTKKVIKA-IQKRR 439 >UniRef50_C1D6V6 Electron transport complex protein RnfC n=2 Tax=Betaproteobacteria RepID=C1D6V6_LARHH Length = 620 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 76/429 (17%), Positives = 129/429 (30%), Gaps = 72/429 (16%) Query: 1 MKNIIRTPETHPLTWR-LRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGL 59 + I P HP L +P LD + + A + + N + D G+ Sbjct: 81 VLAIEPRPFAHPSGLADLCIVIEPDGLDRSV-----DPSPVAWQQMPAATLQNALADQGV 135 Query: 60 KGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLIS 119 G GGA F TGLK + + + L+ N E EP D LM + +V+G+ + Sbjct: 136 VGLGGAVFPTGLKVA------AEGLETLVINGAECEPYITCDDRLMRERAADIVKGIRLL 189 Query: 120 AFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYI 179 A ++ + + E +M + V RY Sbjct: 190 AERMQPREVLVGIEDNKPE-----------------AIAAMMAAVAGTGIEVVPVPTRYP 232 Query: 180 CGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNI 239 G LI L G+ P + NV T V L G+ Sbjct: 233 GGGAKQLIRVLTGKEV--------PHGRRSTEFGVQCFNVATAYTVWQALECGI------ 278 Query: 240 SKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDF 299 ++L+ +G V PG E GT A +++ G+ G GG F Sbjct: 279 ----PIVSRLVTLTGAVTRPGNVEALIGTPADWLMQSA--GLLAGHD--GIIMGGPMMGF 330 Query: 300 LTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRD 359 + I KA + L + C C C Sbjct: 331 VLPDAG------AGITKATNCLIGKTRQLFPPRPAAL-------------PCIRCGECAK 371 Query: 360 GLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEF 419 P ++ + + + ++ F C++ + PL ++ + + Sbjct: 372 ACPTDLQPMDLYWFAKSRQT--GRAQEHHLFDCIECGACSYVCPSQIPLVDYYRFAKSDI 429 Query: 420 EAGIKQPFS 428 A + + Sbjct: 430 WAAERDKKA 438 >UniRef50_A5EVI2 Electron transport complex protein, C subunit n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EVI2_DICNV Length = 535 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 74/435 (17%), Positives = 132/435 (30%), Gaps = 78/435 (17%) Query: 13 LTWRLRDDKQPVWLDE-----YRSKNGYEGARKALTGLS----PDEIVNQVKDAGLKGRG 63 + + + +G + K L L +++ +V D G+ G G Sbjct: 90 IITAIEPRYDRHSSNTLALTITLQADGADHFCKPLPSLDERFPREQLRARVSDCGVVGLG 149 Query: 64 GAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFAL 123 GAGF T K +L ++L+ NA E EP D + + + +V G +SA+ L Sbjct: 150 GAGFPTARKLALA-------AKHLVINAAECEPYISCDDMQIREHAAQIVRGAQLSAYIL 202 Query: 124 KAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEE 183 + + +A L +AIA+A D + + RY G Sbjct: 203 SVDSIRFGIENDKPQAIAALEKAIADAA--------------DPRISLTIIPARYPSGNS 248 Query: 184 TALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSK 243 L L R N A + +N T+ V L +G + Sbjct: 249 RQLFELLFNVRVN---------GKHAHDRGFICHNTATMKAVYDALTHG----------R 289 Query: 244 DAGTKLMGFSG-RVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTE 302 + + SG + P ++ + GT E++ G + GG+ E Sbjct: 290 PLLERYVTVSGSEIARPQVYRVRIGTPLTELIAQSGGTTPNSR----LLIGGSMMG---E 342 Query: 303 AHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLP 362 L+ + G T + + + C C C D P Sbjct: 343 PQLNTEV--------GLTKTTNCLLLLPETKAEPT-----------SECIRCGRCSDACP 383 Query: 363 WSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAG 422 + L + + L+ F CA + PL + +++ Sbjct: 384 MHL--LPQQLYWYSRQQNSAALKNYRLFDCIECGICASVCPSRLPLVDYYRVSKDQLRTQ 441 Query: 423 IKQPFSNTHLINGIQ 437 + + Q Sbjct: 442 ERNEKNAARAQKRHQ 456 >UniRef50_O96948 Hydrogenase (Fragment) n=72 Tax=root RepID=O96948_NYCOV Length = 1206 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 111/403 (27%), Positives = 169/403 (41%), Gaps = 32/403 (7%) Query: 36 EGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEME 95 E +KA++ + P++++ +V + L GRGGAGF TG KW K + + +Y++CNADE Sbjct: 830 EATKKAVS-MGPEKVIEEVFKSNLVGRGGAGFRTGKKWESAYKTPASD-KYVVCNADEGL 887 Query: 96 PGTYKDRLLMEQLP--HLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEA 153 P TYKD L+ + GM I A + A R +++LR EY L ++I + Sbjct: 888 PSTYKDWCLLNNEAKRKEVFTGMGICAKTIGAKRCFMYLRYEYRNLVPALEQSIKDVQST 947 Query: 154 GLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPP---FPATSGAW 210 D + + G G Y+ GEE A S+EGR PR P FP G + Sbjct: 948 -------CPELADLKYEIRLGGGPYVAGEENAQFESIEGRAPLPRKDRPGNIFPTMEGLF 1000 Query: 211 GKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPF-GTT 269 KPT +NNVET +P I+ G Q+ + K KL+ +G V P L E + Sbjct: 1001 HKPTVINNVETFFAIPHIIQQGS---QSFGEGKMP--KLLSVTGDVDEPILIETNLNNYS 1055 Query: 270 AREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAV 329 +L++ + A + GG + + D F G+ + Sbjct: 1056 LNHLLQEISA-----KDIVAAEIGGCTEPIIFGSKFDTLFGFG----RGTLNAVGSVVLF 1106 Query: 330 DHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCR 389 + ++ + N +F A ESC C PCRDG + R G+ + Sbjct: 1107 NSSCDLGKIYENKLKFMAEESCKQCVPCRDGSYIFHRAF-KELRDTGKSSYNMRALAVAS 1165 Query: 390 FLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHL 432 + CAH +SA + + I QP S H Sbjct: 1166 ESAARSSICAHGKALESLFKSACDFMNK--TKPIYQPHSTYHQ 1206 >UniRef50_Q0AAG9 Electron transport complex, RnfABCDGE type, C subunit n=2 Tax=Chromatiales RepID=Q0AAG9_ALHEH Length = 515 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 72/432 (16%), Positives = 126/432 (29%), Gaps = 67/432 (15%) Query: 1 MKNIIRTPETHPLTWR-----LRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVK 55 + I HP + D G + +V+ Sbjct: 81 VVAIEDRQVPHPSGLAAPCIVIESDGDDRAAPPM-------AVIDDPAGTPARVLRARVR 133 Query: 56 DAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEG 115 +AG+ G GGA F T +K + L+ N E + D LM + P +++G Sbjct: 134 EAGIVGLGGAAFPTAIKLNPP---SDTLPDTLIANGVECDTHITCDDRLMRERPEQILDG 190 Query: 116 MLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGA 175 + +A L R I + G+ E A L + + + V Sbjct: 191 VATAADMLNVVRIRIAVEGDKPE---------AARALRDALAASGLADDGRRDWAVVDVP 241 Query: 176 GRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEW 235 RY G E LI++L GRR P+ +NV T + + +G Sbjct: 242 KRYPAGSERQLIHNLTGRRV--------PSDGLPKDVGVITSNVGTFAAIHRAIRHGEPL 293 Query: 236 YQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGG 294 + +++ +G V+ P E GT E+++ G + G Sbjct: 294 IR----------RIVTITGDGVRRPANVEARIGTPMAELIDHCGGYHDGVYQL--VMGGS 341 Query: 295 AGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWC 354 L + + KA + L A + C C Sbjct: 342 LMGTALLSDDV-------PLIKASNCLLAATPSELPPAEPP-------------MPCIRC 381 Query: 355 TPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKY 414 C + P + + + D E + F CA + PL ++ Sbjct: 382 GACAEACPERLAPQQIYWH--TRARDYEHADDWGVFDCIECGACAWVCPSHIPLVQYFRH 439 Query: 415 FREEFEAGIKQP 426 + ++ Sbjct: 440 AKGAIAQKEQEK 451 >UniRef50_A6VVJ2 Electron transport complex, RnfABCDGE type, C subunit n=6 Tax=Gammaproteobacteria RepID=A6VVJ2_MARMS Length = 981 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 74/451 (16%), Positives = 133/451 (29%), Gaps = 78/451 (17%) Query: 1 MKNIIRTPETHP-----LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVK 55 + I HP L L D W + +++ + Sbjct: 83 IAAIEERLIAHPSGLSDLCIILTPDGNETWTTL--------EPLNNWQNICKTDVLAYLS 134 Query: 56 DAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEG 115 + G+ G GGAGF T +K K+ + + + NA E EP D +L+ + LV G Sbjct: 135 EMGIIGMGGAGFPTQVKLQGAHKN---PLTHFIINAAECEPYITADDMLIREKTLELVLG 191 Query: 116 MLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGA 175 + + ++A I + A L+ + + + ++ + Sbjct: 192 IEMLQHLVEADNVIIGIEDNKPTAIAALKTVLTQR---------------NSKIQIAVVP 236 Query: 176 GRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEW 235 +Y G E LI L G+ P NV T V + G Sbjct: 237 TKYPSGGEKQLIQLLTGKEVPSGQYPA--------DIGVLCQNVGTCVAVHDAITQG--- 285 Query: 236 YQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGG 294 K ++ +G +K+P E+ GT +LE + K GG Sbjct: 286 -------KPLISRFTTLTGDALKSPQNVEVLLGTPVEHLLEYA---DSEPKKLSRLIMGG 335 Query: 295 AGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFA-RESCGW 353 G L +A V +++ + A ++C Sbjct: 336 PMM--------------------GYTLDSAAVPIVKTSNCILAASKKELPPPAPEQACIR 375 Query: 354 CTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIK 413 C C P +L + + E E F C++ + PL + Sbjct: 376 CGMCEQACPA--SLLPQQLLWFSKSQEFEKAEHHNLFDCIECGACSYVCPSSIPLVQYYR 433 Query: 414 YFREEFEAGIKQPFSNTHLINGIQPNLLKER 444 + + + + + + K R Sbjct: 434 HTKSSIRE--AREANVKSDLAKQRFEARKAR 462 >UniRef50_C8NC21 Electron transport complex protein RnfC (Fragment) n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NC21_9GAMM Length = 630 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 137/441 (31%), Gaps = 81/441 (18%) Query: 1 MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSP-----DEIVNQVK 55 ++ I PE HP + P + + +G + + LT L P D + ++ Sbjct: 92 IRAIEPRPEMHP-----ANQPVPHLI---LASDGKDESVPPLTALDPATTDADALRERIA 143 Query: 56 DAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEG 115 G+ G GGAGF T K L+ NA E EP D L + + ++ G Sbjct: 144 ACGIVGLGGAGFPTARKL-------GHPANTLVINAAECEPYITCDDLQIRENAADIIHG 196 Query: 116 MLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGA 175 I+A L A + + + +A + D L + + Sbjct: 197 AQIAAKILGAEHIHFGIEDDKP--------------QAIAALERAAADINDPRLKISSVP 242 Query: 176 GRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEW 235 RY G L L G R PA A +N T+ V Sbjct: 243 TRYPSGNTRQLFELLLGVRV--------PADQHASDYGLICHNSGTMKAV---------- 284 Query: 236 YQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGG 294 Y + + + + SG V P + + G R+++ G D + GG Sbjct: 285 YDAVIRGEPLTERYTTISGEGVNQPQVLRIRTGAPVRDLIAQAGGEKGDNR----YIIGG 340 Query: 295 AGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWC 354 + D P + K G+ L L+ C C Sbjct: 341 PMMGY-QIISADTP-----LQKTGNSL----------------LLLPAIAPAEESPCIRC 378 Query: 355 TPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKY 414 + C D P ++L Q + + L+Q + CA + PL ++ Sbjct: 379 SRCADACPM--ELLPQQLLWYSQSDEHKRLKQYRLYDCIECGICAAVCPSAIPLVQYYRH 436 Query: 415 FREEFEAGIKQPFSNTHLING 435 + A ++ + H Sbjct: 437 SKGAIRAADEKARAAEHARTR 457 >UniRef50_Q2J9U3 Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit n=3 Tax=Frankia RepID=Q2J9U3_FRASC Length = 510 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 99/433 (22%), Positives = 170/433 (39%), Gaps = 58/433 (13%) Query: 46 SPDEIVNQVKDAGLKGRGGAGFSTGLKWSL------------------------------ 75 P ++ ++ D+GL GRGGA F T K + Sbjct: 93 GPGRLLPEIHDSGLTGRGGAAFPTWRKLAASAEGTCLDGSHSGSAHRGSTHRGSQHRNAG 152 Query: 76 --MPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLR 133 + S ++ NA E EP + KD L+ PHL+++G+ ++A A+ A +++ Sbjct: 153 HRADRYRSSAHPVVVANAAEGEPESAKDVTLLTVAPHLVLDGLQLAAEAVGADDAFVY-- 210 Query: 134 GEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGR 193 L+ A L + F + + ++ GE +A+I +LEG Sbjct: 211 ---------LKPGPAVTAVRRALAQRRAAGWDRFTVQIREAPETFVAGEASAVIAALEGG 261 Query: 194 RANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFS 253 A PR+ A +G G+PT V N ETL ++ I G W++++ +++ GT L + Sbjct: 262 AARPRAHWQPLAEAGFHGRPTLVQNAETLAHLALIARWGASWFRSVGTAEEPGTFLATVT 321 Query: 254 GRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLT-EAHLDLPMEFE 312 G V PG+ E+PFGT + + G + A++ GG +L + M Sbjct: 322 GAVAAPGVVEVPFGTPLGTLAQLAGGFT---EQVGAFRVGGYSGAWLPGGPGATIAMSRA 378 Query: 313 SIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALE 372 ++ G+ GT + + + + + A ++ G C PC GLP + + Sbjct: 379 ALAPWGAAPGTGVVAVLPARGCGLVETARIVGYLAAQNAGQCGPCVSGLPQLADAVAGMA 438 Query: 373 R----------GEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAG 422 R G G PG L G+ C H GA + SA++ F ++ A Sbjct: 439 RTDGGSGGPVQGAGDPGQSAIRALRLAALVAGRGACHHPDGAARLVHSALRTFVDDIRAH 498 Query: 423 IKQPFSNTHLING 435 + Sbjct: 499 -AEGRCLGSACAS 510 >UniRef50_A8FUX8 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FUX8_SHESH Length = 842 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 73/451 (16%), Positives = 133/451 (29%), Gaps = 73/451 (16%) Query: 1 MKNIIRTPETHPLTW-----RLRDDKQPVWLDEYRSKNGYEGAR-KALTGLSPDEIVNQV 54 + I + P H + D Q + + + + S EI+ ++ Sbjct: 89 VTKIEQRPSNHASGLPVLSCVITPDGQDT-----LTPDIHAPLSWSDIASWSNQEILRKI 143 Query: 55 KDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVE 114 +DAG+ G GGA F T +K + +I L+ NA E EP D +LM + + Sbjct: 144 QDAGIAGLGGAAFPTHIKLNPA-----SDIELLIINAIECEPYITADDMLMREHSDAICL 198 Query: 115 GMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTG 174 G+ I L+ R I + EA + A+ + + + + Sbjct: 199 GIAIIHRLLQPKRLIIAVEDNKPEAIEEMHHALNRSQLP------------KEGVRITSV 246 Query: 175 AGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVE 234 Y G E LI L G P+ S V N+ T + + Sbjct: 247 PTLYPSGGEKQLIQILTGEEV--------PSGSIPAQLGIVVQNIATSYAITDAVLR--- 295 Query: 235 WYQNISKSKDAGTKLMGFSG-RVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPG 293 S +++ +G +PG + +P GT +L G + G Sbjct: 296 -------SYPLIERVVTVTGNNTSSPGNYWVPIGTPISHLLTQTG---FRGNETDKVIIG 345 Query: 294 GAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGW 353 G + P+ S + + + + L C Sbjct: 346 GPMMGYALYND-SAPIIKGS-----------NCLLLPDSNELAPAAKELA-------CIR 386 Query: 354 CTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIK 413 C C P + + + + D L C + + PL + Sbjct: 387 CGECAQVCPAQLLPQQLFWHAKAKEYDKAVNFNLAD--CIECGCCTYVCPSNIPLVEYYR 444 Query: 414 YFREEFEAGIKQPFSNTHLINGIQPNLLKER 444 + + ++ + L +R Sbjct: 445 IAKSAVKTEAEEKKQAELAKQ--RFELRTQR 473 >UniRef50_B5JR42 Electron transport complex, RnfABCDGE type, C subunit subfamily n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JR42_9BACT Length = 456 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 71/379 (18%), Positives = 119/379 (31%), Gaps = 60/379 (15%) Query: 39 RKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGT 98 + + +S EIV V++ GL G GGA F T +K + + + +L N E EP Sbjct: 127 SRNVDEMSQQEIVKAVQETGLVGLGGAAFPTHVKLTPP---KDHKVHTVLINGCECEPFL 183 Query: 99 YKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGK 158 D +M + LV G I AL A R I ++A +R + Sbjct: 184 TTDHRVMLEQAEDLVAGTRIFMKALNAERAIIGTENNKLDAVEAIRAKL----------- 232 Query: 159 NIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNN 218 D + V +Y G E L +L +P++ G V N Sbjct: 233 -----PKDGSITVQAVKTKYPQGAEKMLAKALMNLEIPSGG---YPSSVGL-----AVFN 279 Query: 219 VETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDY 277 V + V A+L + +++ +G ++ G + +P GT R IL+ Sbjct: 280 VSSTAQVGALLP----------VNGGVIERVVTVTGPGIEKQGNYNVPIGTPIRFILDQL 329 Query: 278 AGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVS 337 + GG + LD+P+ G + + Sbjct: 330 GF----RGSAQHIILGGPMMGSC-ISSLDVPITK----------GCGGVLVLTERDVQSE 374 Query: 338 LVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTF 397 R C C C + P + + D E Sbjct: 375 ASR------TSHPCISCGACVEACPMHLNPCQLGRLAYKSQYD-EMQSSFHLNDCFECGS 427 Query: 398 CAHAPGAVEPLQSAIKYFR 416 C++ + PL + + Sbjct: 428 CSYVCPSSIPLVQYFRIAK 446 >UniRef50_B3PB34 Electron transport complex protein RnfC n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PB34_CELJU Length = 786 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 80/451 (17%), Positives = 138/451 (30%), Gaps = 71/451 (15%) Query: 1 MKNIIRTPETHPLTWR-----LRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVK 55 + I H + D + W++ + L E++ +++ Sbjct: 84 IVTIAPHAIPHASGMASECIVIETDGRDEWIERQECSD--------YLVLDRLELLAKIR 135 Query: 56 DAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEG 115 AG+ G GGAGF T +K + + I L+ N E EP D +LM+ L+EG Sbjct: 136 AAGVAGLGGAGFPTDIKLAP---KSTQVIDTLIINGAECEPYITADDILMQVNARELLEG 192 Query: 116 MLISAFALK-AYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTG 174 L+ + L + + + +A L+ A+ E N + V Sbjct: 193 TLLISHILHHPRQLLVGVEDNKPKAIAALKEALLELRLNRAEAAN---------IQVVAI 243 Query: 175 AGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVE 234 +Y G L L GR P+ + NV T + G Sbjct: 244 PTKYPSGGAKQLTQILTGREI--------PSGHHSADVGVICVNVGTAVAAWRAVRYGEP 295 Query: 235 WYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPG 293 +++ G + E+ GT +L+ + R G + G Sbjct: 296 L----------ISRITTLVGEALDTQRNIEVRLGTPIDYVLQVHGFDARKGSR---VIMG 342 Query: 294 GAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGW 353 G F L P+ + L D E+ + ++C Sbjct: 343 GPMMGFTLPD-LRAPIIKTT---------NCLLAPSDTEMPLP---------PPAQACIR 383 Query: 354 CTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIK 413 C C + P V +L Q D E LE F CA+ + PL + Sbjct: 384 CGLCAEACP--VDLLPQQLFWYAQAEDFERLESHNLFDCIECGACAYVCPSSIPLVQYYR 441 Query: 414 YFREEFEAGIKQPFSNTHLINGIQPNLLKER 444 + +++ + + K R Sbjct: 442 AAKGSI--HLQELEKEKSDRSRQRFEFRKAR 470 >UniRef50_A6FIW1 Electron transport complex protein RnfC n=2 Tax=Proteobacteria RepID=A6FIW1_9GAMM Length = 931 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 91/426 (21%), Positives = 148/426 (34%), Gaps = 74/426 (17%) Query: 1 MKNIIRTPETHP-----LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVK 55 +++I + P THP + +L D++ + LS E+ + Sbjct: 90 IEHIAQYPSTHPSATPEIAIKLVCDQEDQAM--------PAQPALDYKQLSTSELQQHIS 141 Query: 56 DAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEG 115 AG+ G GGAGF T +K + + I +LL NA E EP D +LM + +++G Sbjct: 142 QAGVAGMGGAGFPTAVKLN-----DRQPIEFLLINAAECEPYITSDDVLMRERADDIIQG 196 Query: 116 MLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGA 175 + I +K I + +AA L AI + ++ V Sbjct: 197 IEILRHMIKPALCVIGIEDNKPDAAQALETAINK-------------INLSNDIIVRKVP 243 Query: 176 GRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEW 235 +Y G E LI L G+ SK PA SG + NV T+ V + + Sbjct: 244 TKYPNGGEKQLIQMLTGKEI---SKGQIPAQSG-----IVMQNVGTVYAVKQAIID---- 291 Query: 236 YQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGG 294 + ++++ +G+ P + GT +L ++ D K A GG Sbjct: 292 ------RQPLLSRIVTLTGKAFPQPRNVQALIGTPISALLSEFH---CDETKAAAIIYGG 342 Query: 295 AGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWC 354 F LP S+ K G + V EI V +C C Sbjct: 343 PMMGFT------LPHTQFSLTKT----GNCILTPVKDEIPQVREAD---------ACIRC 383 Query: 355 TPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKY 414 C + P V +L Q D++ L C++ + PL + Sbjct: 384 GECSEVCP--VDLLPQQLHWYSQAKDVKKLNDYNLMDCIECGACSYVCPSQIPLVHQYRI 441 Query: 415 FREEFE 420 + E Sbjct: 442 AKVEVR 447 >UniRef50_A8ZSV2 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZSV2_DESOH Length = 454 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 72/417 (17%), Positives = 132/417 (31%), Gaps = 64/417 (15%) Query: 6 RTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGA 65 P D Q G + + A P I + AG+ G GGA Sbjct: 97 PNGRHVPAVPIKADGDQLEGAALMEEILGGDWPKDAADKHDPKAISEAISAAGIVGLGGA 156 Query: 66 GFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKA 125 F T +K ++ + LL N E EP D +M + ++ G L++ A+ A Sbjct: 157 AFPTHVKI---MPNDKRPVDALLINGCECEPFLTPDYRIMVEAADAVICGALLAGRAVGA 213 Query: 126 YRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETA 185 + + + +A + RA + + +Y G E Sbjct: 214 KQIVVGIEANKPKAVEAMTRAAQ-----------------GTAVKIAVLKTKYPQGSEKH 256 Query: 186 LINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDA 245 LI ++ R+ P P V+NV T+ V + K Sbjct: 257 LIMAVMKRKVPPGKLP--------LEVGAAVSNVGTVVAVARAVLR----------KKPL 298 Query: 246 GTKLMGFS-GRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAH 304 +++ + G + P +P G + E++E G + + GG F Sbjct: 299 THRVVCVTGGGIVQPKNLLVPIGISYGELIEFCGGLRPEAAR---IVSGGPMMGFAF-TD 354 Query: 305 LDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWS 364 +++P+ G + + + + +C C C D P Sbjct: 355 MEMPVTK----------GASGVTVLTRDD---------VKKAEETACVRCGRCVDVCP-- 393 Query: 365 VKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEA 421 + ++ + + ++E E+ F CA+ A PL I+ + A Sbjct: 394 LNLVPSKLAVASRNKNLEVAERYNIFTCLECGCCAYTCPASLPLVQLIRMGKAAIMA 450 >UniRef50_D1PN92 Na(+)-translocating NADH-quinone reductase, A subunit n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN92_9FIRM Length = 456 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 71/391 (18%), Positives = 128/391 (32%), Gaps = 64/391 (16%) Query: 41 ALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYK 100 T ++ ++ GL G GGAGF T +K + + + LL NA E EP Sbjct: 125 PPTVTDKASLLAAIQACGLVGVGGAGFPTHVKLA------ADTVDTLLINAAECEPYLTT 178 Query: 101 DRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNI 160 D M + ++ G+ I + E + L +N+ Sbjct: 179 DCREMLECSDTIISGIAAVMKYCNIPNCIIGIERNKPECIDQMYS----------LTRNM 228 Query: 161 MGTGFDFELFVHTGAGRYICGEETALINSLEGRRAN---PRSKPPFPATSGAWGKPTCVN 217 G + V RY G E L+ + GR P K PA G + Sbjct: 229 SG------VSVKPLPTRYPQGAEKTLVETCTGREVPQVGPSGKAGLPADVG-----CIIM 277 Query: 218 NVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILED 276 NV ++ + L G+ TK + G + P E+P GT R+++E Sbjct: 278 NVTSVSTLGKYLKTGMPL----------TTKRVTVEGDAIAKPQNVEVPIGTLYRDVIE- 326 Query: 277 YAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMV 336 GG++ ++ GG +A + ++ Sbjct: 327 ACGGIKPDVELGKIIFGGPMMGGAAP--------------------SADFPVLKQNNGLL 366 Query: 337 SLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKT 396 + + +C C C D P ++ + + D + L+ C L Sbjct: 367 LFSKKAADLPEASACIRCGRCIDACPMGLEPV--VVAEAFNNRDFDALKARCVDLCVACG 424 Query: 397 FCAHAPGAVEPLQSAIKYFREEFEAGIKQPF 427 C++A A P+ + + + + +++ Sbjct: 425 SCSYACPAKRPVSQTMTLAKAWYMSELRKGG 455 >UniRef50_Q67R12 Na+-transporting NADH-quinone reductase subunit 1 n=1 Tax=Symbiobacterium thermophilum RepID=Q67R12_SYMTH Length = 446 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 88/416 (21%), Positives = 132/416 (31%), Gaps = 78/416 (18%) Query: 4 IIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRG 63 I PE P W D LD L P I ++V+ AGL G G Sbjct: 99 IEPAPEDQP--WEGLPDGLGWDLDP--------------ESLDPAFIRDRVRQAGLVGMG 142 Query: 64 GAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFAL 123 GAGF +K + P ++ N E EP D LM + P +V G+ + A Sbjct: 143 GAGFPAAVKLTPKP---GTEPDVVILNGAECEPAITSDHRLMLEHPEQVVLGLRLFMRAS 199 Query: 124 KAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEE 183 A RG I + +AA L + +A D + V RY G E Sbjct: 200 GAKRGIIAVEANKPDAAGKLSQLVA----------------GDPAISVEVLPVRYPQGAE 243 Query: 184 TALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSK 243 L+ +L R P GA +A +++ + Sbjct: 244 KMLVWALLRRAVPVGG---IPLDVGAV---------------VQNVATAAAAAVALAEGR 285 Query: 244 DAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEA 303 +++ +GRV PG W +P GT+ +++E G GG Sbjct: 286 PLTHRIVTVTGRVTRPGNWLVPLGTSFVDLVEASGGLTGP---LARVIAGGPMMGIAQPD 342 Query: 304 HLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPW 363 LD+P+ T + + E + C C C P Sbjct: 343 -LDVPVIKT----------TGSVILLGPED---------LDETPAGPCIRCGRCVAACPM 382 Query: 364 SVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEF 419 + L A GD E+ C++ A PL +I+ + E Sbjct: 383 GL--LPARLCSAALAGDWGAAERYHVRACMECGSCSYVCPARRPLVQSIRLAKYEL 436 >UniRef50_B8CM56 Electron transport complex, RnfABCDGE type, C subunit n=4 Tax=Shewanella RepID=B8CM56_SHEPW Length = 917 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 70/433 (16%), Positives = 138/433 (31%), Gaps = 73/433 (16%) Query: 1 MKNIIRTPETH----PLTWRLR-DDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVK 55 + I P H P+ + D + ++ + S+ ++ L +I+ +++ Sbjct: 89 VTAIKPMPSNHASGLPVLSCILIADGKDEAIETHTSE---------ISKLDNQQILQKIQ 139 Query: 56 DAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEG 115 DAG+ G GGA F T +K +I ++ N E EP D LM++ ++ G Sbjct: 140 DAGIAGLGGAAFPTHIKLRPA-----SDIELVIINGIECEPYITSDDRLMQEYSDEIISG 194 Query: 116 MLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGA 175 + I L R I + EA ++ ++ + + + + + Sbjct: 195 IGIIERLLTPKRIIIAIEDNKPEAFEAMQHSLNRSELS------------SEKTRITSVP 242 Query: 176 GRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEW 235 +Y G E LI L G+ P+ + V NV T + + NG Sbjct: 243 TKYPSGGEKQLIQILTGQEV--------PSGAIPAQLGMLVQNVGTAYAIQDAVINGQPL 294 Query: 236 YQNISKSKDAGTKLMGFSG-RVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGG 294 ++++ +G ++PG + +P GT +L+ G + L+ GG Sbjct: 295 ----------ISRVVTVTGQNSESPGNYWVPVGTQIDHVLQV--NGFKGKLEQDKVIIGG 342 Query: 295 AGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWC 354 A GT + + C C Sbjct: 343 PMMGHTLPD-----------IAAPVLKGTNCILLPSSDEVAPEQ--------PEMPCIRC 383 Query: 355 TPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKY 414 C P ++L Q + + C++ + PL + Sbjct: 384 GECAVACPA--QLLPQQLFWHAQAQEYDKAASFNLNDCIECGCCSYVCPSDIPLVEYYRV 441 Query: 415 FREEFEAGIKQPF 427 + + ++ Sbjct: 442 AKSALRSQSEEKK 454 >UniRef50_A4SEA3 Electron transport complex, RnfABCDGE type, C subunit n=6 Tax=Chlorobiaceae RepID=A4SEA3_PROVI Length = 441 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 75/431 (17%), Positives = 145/431 (33%), Gaps = 74/431 (17%) Query: 1 MKNIIRTPET---HPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDA 57 +K++ P + L+ + D + W + G A GLS + I+ ++KDA Sbjct: 78 VKSVKSVPHPGGNYSLSVTITTDGEDAWAE------GLNTAPIDWKGLSKESIIERIKDA 131 Query: 58 GLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGML 117 G+ G GGAGF + +K S P I ++ N E EP D +M + +++G+ Sbjct: 132 GIVGMGGAGFPSSVKLSPPP---DKTIDTIILNGAECEPFLTADHRVMVEYAEEVIKGLE 188 Query: 118 ISAFAL-KAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAG 176 I + +I + + + + + T Sbjct: 189 IITSLFQGKAKPFIGIEANKPD-----------------AIAAMKKAAKGTGIEIVTLET 231 Query: 177 RYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWY 236 +Y G E LIN++ GR + K V+N+ T + Y Sbjct: 232 KYPQGAEKQLINAITGRTIE--------EGQLPFDKGCLVHNIGTAVAI----------Y 273 Query: 237 QNISKSKDAGTKLMGFSG-RVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGA 295 +S ++ +++ SG + + GT + + ++GG+ + K GG Sbjct: 274 DAVSCNRPLVERVLTVSGMEISSARNIRAVIGTRFSD-IAAFSGGISE--KTNQVITGGP 330 Query: 296 GTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCT 355 ++ L++P+ T+ + +++ E +C C Sbjct: 331 MMGR-SQFTLEVPITKT----------TSGILFINNAG---------LESSRERTCIRCG 370 Query: 356 PCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYF 415 C D P ++ + + D L L C + L IKY Sbjct: 371 KCIDACPQGLEPWLLGNEAQFRRLDEAELYGLAN--CTECGSCTFVCPSKRELVHWIKYA 428 Query: 416 REEFEAGIKQP 426 + ++ Sbjct: 429 KALVNNRKQRK 439 >UniRef50_D1A5I5 NADH dehydrogenase (Quinone) n=2 Tax=Actinomycetales RepID=D1A5I5_THECD Length = 505 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 104/454 (22%), Positives = 168/454 (37%), Gaps = 58/454 (12%) Query: 1 MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLK 60 M + P D + LD +R+ +G AL + +E++ + ++ Sbjct: 1 MTAVSIATIGSPRLTMGFDRFDRIDLDRHRALHG------ALAVPTLEELLKITEAVDIR 54 Query: 61 GRGGAGFSTGLKWSLMPKDESMNIRY---------------------LLCNADEMEPGTY 99 GRGGA F K + K ++ N E EPG+ Sbjct: 55 GRGGAAFPFARKLMAVAKQVGRPGDVDDFLLPGEEDDHRGRRQKRAVVVVNGSEGEPGSK 114 Query: 100 KDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKN 159 KD++L+ + PHL+++G I+A AL I + E AA ++R AI E Sbjct: 115 KDKVLLTRNPHLVLDGAQIAATALGTRDIVIAIEDE--TAARSMRAAIVERR-------- 164 Query: 160 IMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNV 219 V R+I GE A+I ++ G P + A SG G+PT ++N Sbjct: 165 -------MPAEVVRLPERFISGESGAVIRAINGETPIPPGRKVRAAESGVDGRPTLLSNT 217 Query: 220 ETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAG 279 ET + +++ G + Y ++ + GT L+ V + E P GT + Sbjct: 218 ETFAQLAVLVSLGPDLYASVGTDSEPGTTLL----TVGGTTVVECPLGTPLASVFAQCGV 273 Query: 280 GMRDGLKFKAWQPGGAGTDFLTEAHLDLP-MEFESIGKAGSRLGTALAMAVDHEINMVSL 338 G GG +++T + G LG + + + + Sbjct: 274 QPGQG-----VLVGGYHGEWITPEAARTAIVSRAGFQAVGGSLGAGIILPLPEGTCPLRE 328 Query: 339 VRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFC 398 V + + A +S G C PCR GLP + L AL G G P L + +G G+ C Sbjct: 329 VARIASYMAGQSAGQCGPCRLGLPDLYRSLEALVDGSGSPE----LVRRAAGIGRGRGAC 384 Query: 399 AHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHL 432 +H G SA+ F + E Sbjct: 385 SHPDGTARFALSALNTFARDIEIHQLNGTCGQPC 418 >UniRef50_C9N0M8 Electron transport complex, RnfABCDGE type, C subunit n=2 Tax=Leptotrichia RepID=C9N0M8_9FUSO Length = 464 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 70/387 (18%), Positives = 123/387 (31%), Gaps = 68/387 (17%) Query: 41 ALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYK 100 L + +EI + +K+AG+ G GGA F T +K+ + + + L+ N E EP Sbjct: 145 DLKLIKKEEIFSIIKEAGIVGLGGAQFPTHVKYDIKFR----KVDTLIINGAECEPYLTS 200 Query: 101 DRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNI 160 D +M+ ++ G+ + L I + E E + Sbjct: 201 DYSVMKNHTKEIINGLKVIQKLLNPKEVVIGIEEENRELVEVIEE--------------- 245 Query: 161 MGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVE 220 MG F++ V Y G E LIN++ G + P K V+NV Sbjct: 246 MGRKEKFQIKVKLLPTIYPQGSELQLINTVTGIKVRKGELP--------LEKGVVVSNVS 297 Query: 221 TLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAG 279 T+ + Y + K +++ SG +N G + + FGT I++ Sbjct: 298 TVKAI----------YDAFFEGKPLIERVVTISGEEARNIGNYRIKFGTPLYHIVKRLKI 347 Query: 280 GMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLV 339 + GG D + GT+ + + E Sbjct: 348 TNEE-----KVIFGGPMMGI---EVFDSRVP--------VIKGTSGILFLSTEE------ 385 Query: 340 RNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCA 399 R +C C C + P ++ + G E + + C Sbjct: 386 ------IERNNCISCGYCVEACPMNLMPFE--FADYYEKGKYEKMVKANIQNCIECGACE 437 Query: 400 HAPGAVEPLQSAIKYFREEFEAGIKQP 426 + PL +IK + + Sbjct: 438 FVCPSRVPLMESIKTGKAVLSEMEENR 464 >UniRef50_C1SKX2 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SKX2_9BACT Length = 436 Score = 246 bits (629), Expect = 9e-64, Method: Composition-based stats. Identities = 76/429 (17%), Positives = 128/429 (29%), Gaps = 82/429 (19%) Query: 1 MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLK 60 + I P HP++ R+ V ++ + + S V AG+ Sbjct: 82 VVAIGTVP--HPVSGRVPG----VSIEVEELSDEFMPLD------SNTSFQKSVMFAGIA 129 Query: 61 GRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISA 120 G GGA F + +K S ++ LL N E EP D +M + +++G + Sbjct: 130 GMGGATFPSHVKLSPP-----KDVDTLLINGAECEPYLTCDHRIMLERTEDVIKGASLIR 184 Query: 121 FALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYIC 180 LK + I + +A + E + +Y Sbjct: 185 DNLKLKKLIIGIEKNKPDAIEEFAKYEQEY-----------------NFELVELEVKYPQ 227 Query: 181 GEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNIS 240 G E LI + R P V+NV T + L + Sbjct: 228 GGEKQLIKACLNRVV--------PEGQLPMEVGVIVHNVGTCAAIYDALERQKPLF---- 275 Query: 241 KSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFL 300 +++ +G VK P + GT +++E G K K GG L Sbjct: 276 ------ERMVTVTGAVKEPKNLIVRVGTPISKLIEHCGGFT---GKPKKIIMGGPMMG-L 325 Query: 301 TEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDG 360 LD P+ GT+ + + +M L + C C C + Sbjct: 326 AVTSLDTPV----------MKGTSGILVY-RDEDMPDLTQYK--------CMRCGRCIEA 366 Query: 361 LPWSVKI--LRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREE 418 P + + E E+L C++ + L K + Sbjct: 367 CPMGLVPSAMDRFVVKEM----YESLADWHVMNCIECGCCSYVCPSRRTLAGGFKTSKR- 421 Query: 419 FEAGIKQPF 427 AGI + Sbjct: 422 IVAGILRSR 430 >UniRef50_D1Y5V9 Electron transport complex protein RnfC n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y5V9_9BACT Length = 447 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 79/431 (18%), Positives = 146/431 (33%), Gaps = 69/431 (16%) Query: 1 MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLK 60 +K++ +T P T+ + D K+ P E + ++++AG+ Sbjct: 80 VKDVGPR-QTVPGTFDTCVVVEN---DGLYEKDERWAPLPDYENCDPKEYLKRIREAGIV 135 Query: 61 GRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISA 120 G GGA F +K++ P+ I++ + N E EP D LM + +V+G + Sbjct: 136 GFGGATFPAAVKFAPPPQ---DKIKWFIVNGAECEPYLNCDFRLMMESTDEIVKGTALLL 192 Query: 121 FALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYIC 180 G I + EA L ++A + V +Y Sbjct: 193 RLFPEAEGVIAVENNKPEAIAALSGSVARLGVQ--------------NVRVQPLTVKYPQ 238 Query: 181 GEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNIS 240 G E LI +L G+ + P + NV T+ +A G Sbjct: 239 GSEKMLIEALTGQEYVVTALPA--------DVGCIIANVRTVQQCWRAIALG-------- 282 Query: 241 KSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDF 299 + + +++ +G + P +P GT+ RE+++ G +K GG Sbjct: 283 --EPSTERVVTVTGDAIAEPKNVCIPLGTSIRELVDFCGGFKEAPVK---VLAGGPMMGM 337 Query: 300 LTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRD 359 + LD+P + GT+ +A+ M+ +C C C + Sbjct: 338 -SMRSLDVP----------AVKGTSGVLALTARSTMLRRAT---------ACLHCGRCVE 377 Query: 360 GLPWSVKI--LRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFRE 417 P + L L G+ + + E C + A PL + + + Sbjct: 378 ACPMGLVPSALDTLVLGK----EYDRFEAEGGMNCIECGSCTYVCPACRPLTQSCRDGKS 433 Query: 418 EFEAGIKQPFS 428 A K+ + Sbjct: 434 FVMAQRKKRKA 444 >UniRef50_C9LBM9 Na(+)-translocating NADH-quinone reductase, A subunit n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LBM9_RUMHA Length = 449 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 82/392 (20%), Positives = 138/392 (35%), Gaps = 61/392 (15%) Query: 35 YEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEM 94 YE + + +EI+ ++D GL G GGAGF T K+ I LL NA E Sbjct: 115 YESKLVDIENFTKEEIIAGIRDGGLTGMGGAGFPTHKKYET-----DKKIDALLINAAEC 169 Query: 95 EPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAG 154 EP D LM + + + G+ + A A + Y+ + EAA L + + Sbjct: 170 EPFLTCDYRLMLEYSYAVANGIRLLLKASGAPKAYLCMEDNKPEAAKVLGKILENTK--- 226 Query: 155 LLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPT 214 ++ V +Y G E LI ++ GR PA +GA Sbjct: 227 -------------DIEVKVLPTQYPQGGERQLIQAVLGREVPMGG---LPAEAGA----- 265 Query: 215 CVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREIL 274 V+NV T +L + +++ +G VKNPG + +P GT+A+E++ Sbjct: 266 IVSNVGTAKATADMLLGKTPLIR----------RIVTVTGCVKNPGNYLVPIGTSAKELV 315 Query: 275 EDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEIN 334 E G +K GG T + + E + K T+ + + Sbjct: 316 ELCGGVT---VKNNRVIAGGPMTGPCVASDWNGESELFYVTKN-----TSGILVLPDSQ- 366 Query: 335 MVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPG 394 + + C C C P + + D + E L Sbjct: 367 -----------YEEQPCIRCAGCESVCPAGL--VPYQIEFAYLEEDYDLCESLYASECIA 413 Query: 395 KTFCAHAPGAVEPLQSAIKYFREEFEAGIKQP 426 C++ A L + R+ + +++ Sbjct: 414 CGCCSYICPAKRELSVRTRMARDMVKQRMRER 445 >UniRef50_C9M8J9 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8J9_9BACT Length = 439 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 75/387 (19%), Positives = 135/387 (34%), Gaps = 62/387 (16%) Query: 41 ALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYK 100 + L P I + +K+ G+ G GGAGF T +K + + + L+ NA E EP Sbjct: 114 DIESLDPATIRDVIKNTGIVGMGGAGFPTFIKLTPP---KDAVVDQLIINASECEPYLTC 170 Query: 101 DRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNI 160 D L+ + P +++G+ + + + EA + + Sbjct: 171 DYRLILEDPQPIMDGIRALLVLFPEAKLSVGIEDNKPEAIAKFQ---------------V 215 Query: 161 MGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVE 220 + GFD + +Y G E LI ++ GR P P V N Sbjct: 216 LLDGFDERASLKVLKSKYPQGGEKQLIYAITGRSVPPGKLPA--------DVGAIVCNTY 267 Query: 221 TLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAG 279 T ++ L +G + + +++ SG + NPG + +P G + RE+L+ G Sbjct: 268 TTYDIGYALRHG----------RTSLKRIITVSGDAIANPGNYRVPLGISVREVLDAAGG 317 Query: 280 GMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLV 339 + +K A GG + LD+P+ GT+ +A+ V Sbjct: 318 FTAEPMKLLA---GGPMMGM-SLHSLDVPVVK----------GTSGLLALTAAALKVRPE 363 Query: 340 RNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCA 399 C C C + P + L + + D + + C Sbjct: 364 TR---------CIRCGRCIEACPMGL--LPSALDAVVRLQDYKAFQARGGMNCIECGACT 412 Query: 400 HAPGAVEPLQSAIKYFREEFEAGIKQP 426 ++ A L K ++ A ++ Sbjct: 413 YSCPAGRFLTQTCKEGKKYVAAMNRKK 439 >UniRef50_B2A1V2 Electron transport complex, RnfABCDGE type, C subunit n=2 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A1V2_NATTJ Length = 440 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 76/376 (20%), Positives = 124/376 (32%), Gaps = 62/376 (16%) Query: 39 RKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGT 98 + LS +E+ +KD+G+ G GGA F T + + S I YLL N E EP Sbjct: 113 KNDPDKLSDEELKELLKDSGIAGMGGAAFPTYVNVNQ-----SQPIEYLLLNGAECEPYL 167 Query: 99 YKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGK 158 D M ++P L++G I + A + YI + +A L E Sbjct: 168 TCDHRQMIEMPEKLIKGAEILMRIIGAKKCYIGIETNKPDAIEVLSEQTKELE------- 220 Query: 159 NIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNN 218 + V A +Y G ++ LIN++ R+ P + + V N Sbjct: 221 ---------NMEVVPLASKYPQGYKSHLINAITDRKV--------PRGARSAELGCIVRN 263 Query: 219 VETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSG-RVKNPGLWELPFGTTAREILEDY 277 V T V Y+ + K +++ SG ++ PG + + GT ILE Sbjct: 264 VGTTIAV----------YEAVVYEKPLIERVVTVSGPKIPQPGNFSIRIGTPISHILEQC 313 Query: 278 AGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVS 337 L+ GG T ++ + P+ S T L + + Sbjct: 314 EIEDISTLEGCKVILGGPMTGM-SQYSVQAPIVKNS---------TGLLVFPPEMLPEWD 363 Query: 338 LVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTF 397 +C C C P + + E + E Sbjct: 364 Y----------HNCVKCGDCVAHCPMYLYPNKLSIFAEAEM--YREAEDWDIMDCIECGL 411 Query: 398 CAHAPGAVEPLQSAIK 413 C + + P+ IK Sbjct: 412 CVYQCPSNRPIVQFIK 427 >UniRef50_C8WMP9 Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WMP9_EGGLE Length = 442 Score = 243 bits (621), Expect = 8e-63, Method: Composition-based stats. Identities = 77/388 (19%), Positives = 130/388 (33%), Gaps = 64/388 (16%) Query: 41 ALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYK 100 + +K +GL G GGAGF T +K + +E I + NA E EP Sbjct: 118 PPEVTDQASFLAAIKKSGLVGLGGAGFPTDIKLAPPNLEE---IDLYVVNATECEPYLST 174 Query: 101 DRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNI 160 D M + P ++ G+ + L I + +A +R Sbjct: 175 DYREMMESPDDVLFGIRETCRHLGIPNAMICIESNKPKAIELMRE--------------- 219 Query: 161 MGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVE 220 T D + V RY G E L+++ GR PR K +NNV Sbjct: 220 -LTKDDSSIQVKALPSRYPQGAENVLVHNATGR-VVPRGKRQT-------DVGVMLNNVT 270 Query: 221 TLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAG 279 T+ ++ L G+ + + SG + P + GT R+++E +AG Sbjct: 271 TMASIGRFLKTGMPLVK----------RRFTVSGDAIARPCNANIIIGTRLRDVME-FAG 319 Query: 280 GMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLV 339 ++ K GG + + M++ I + + + Sbjct: 320 LTKEPHK---VVLGGPMMG-----NAQIDMDYPVIRQN------NGVLVFSKDA------ 359 Query: 340 RNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCA 399 E A +C C C + P + + + D + L+ L L G C+ Sbjct: 360 ---MEQPATTACIRCGRCTNSCPMQLSPIAIKKA--YTVQDAKKLDDLMADLCMGCGTCS 414 Query: 400 HAPGAVEPLQSAIKYFREEFEAGIKQPF 427 A +PL K R+ A + + Sbjct: 415 FVCPAKQPLAQTSKLARDFMRAEMARRG 442 >UniRef50_Q18DS5 NAD-reducing hydrogenase, alpha subunit n=1 Tax=Haloquadratum walsbyi DSM 16790 RepID=Q18DS5_HALWD Length = 502 Score = 241 bits (614), Expect = 5e-62, Method: Composition-based stats. Identities = 101/422 (23%), Positives = 164/422 (38%), Gaps = 43/422 (10%) Query: 14 TWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKW 73 ++P +D+Y + G+ L + PD + + + +G G A + L Sbjct: 115 VLSGSGWRRPANVDDYDAAGGF------LKDIDPDAVFDAGESIHGRGWGDACHDSPLTK 168 Query: 74 SLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLR 133 + M D++ ++ NA PG D LL+ +P +++G + A + A IF Sbjct: 169 TWMDADDAEGEAAIVINA-HSNPG---DSLLLSSVPFTILDGAVSLAQTVDASEIVIFAS 224 Query: 134 GEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG- 192 R AI + + TG Y E T + ++EG Sbjct: 225 IADESTIETARTAIDRYPNE-----------SSIAIDLVTGPAEYRAAEPTMALEAIEGN 273 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGF 252 R R +PP P + G +G+PT ++ TL ++ L S T++M Sbjct: 274 HRLEARLRPPGPESVGLYGRPTLIHTARTLAHLAVSLRED-------SIDSHPSTRIMSI 326 Query: 253 SGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFE 312 G V + + E+P TT E KA GG A LD+ ++ E Sbjct: 327 EGDVTDRTIIEVPETTTL----ETVCAAADTTDGIKAACVGGRFGGL--AADLDISVDPE 380 Query: 313 SIGKAGSRLGT-ALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRAL 371 ++ A LGT + + + +V V +F A E+CG C PCR+G ++LR+L Sbjct: 381 TLIDA--NLGTEGIVHVLSEDRCVVEFVGERAQFAAEENCGRCVPCREGTTQLAELLRSL 438 Query: 372 ERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTH 431 G QP I+ L ++ + C A P Q+A+ F EFEA T Sbjct: 439 YDGTYQPEAIDELIRVMTT----TSICEFGVNAGRPTQTALNAFESEFEAH-ANGRCPTG 493 Query: 432 LI 433 Sbjct: 494 SC 495 >UniRef50_B0PD32 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0PD32_9FIRM Length = 437 Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 70/379 (18%), Positives = 111/379 (29%), Gaps = 63/379 (16%) Query: 49 EIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQL 108 E V +K++GL G GGAGF T +K + E + L+ NA E EP D + + Sbjct: 121 EFVQAIKESGLVGLGGAGFPTHIKLNPKNLSE---VDTLVVNAAECEPYITSDYRTIIER 177 Query: 109 PHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFE 168 P +++G+ + + I + +A LRR T D Sbjct: 178 PQDVLDGIEAIKKYVGITQVKIAIEDNKPQAIEMLRR----------------LTKDDSS 221 Query: 169 LFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAI 228 + V + Y G E GR P V N+ T + Sbjct: 222 IEVCSLHAIYPKGAEKVAAYETTGRVIKEGMLPA--------DAGIIVENITTTAFIGQY 273 Query: 229 LANGVEWYQNISKSKDAGTKLMGF-SGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKF 287 L G+ TK++ G + P P G +++ G R K Sbjct: 274 LRTGMPL----------ITKMLTVDGGAIAEPKNVIAPIGAHFSDVIAFCGGYKRPAKKL 323 Query: 288 KAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFA 347 GG L +A D +V Sbjct: 324 ---IMGGPMMGTLVFD-----------AAYPVLKNNNALLAFDESQTVVE---------P 360 Query: 348 RESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEP 407 C C C P+ + + + +I L++L L C+ A Sbjct: 361 EHPCIRCGRCMQNCPYHL--MPRQIEKAYESENIAMLQKLKVMLCMECGCCSFVCPAKRN 418 Query: 408 LQSAIKYFREEFEAGIKQP 426 L K ++ A + Sbjct: 419 LTFTNKMAKQMLRAATAKK 437 >UniRef50_A1AVH8 Electron transport complex, RnfABCDGE type, C subunit n=2 Tax=sulfur-oxidizing symbionts RepID=A1AVH8_RUTMC Length = 497 Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 70/432 (16%), Positives = 131/432 (30%), Gaps = 84/432 (19%) Query: 14 TWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKW 73 + D + W+D G + + + ++ ++ +G+ G GGAGF T +K Sbjct: 97 CITIESDDKDKWIDNEGC--GVDFLHSPVQTM-----IDCIQKSGIVGLGGAGFPTHVKL 149 Query: 74 SLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLR 133 + L+ N E EPG D LM+ P ++ G+ I + A R I + Sbjct: 150 GKI-----KQCHTLIINGTECEPGVMCDNALMQFYPREIIRGVEILLYICGAERAIIAIE 204 Query: 134 GEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGR 193 + A L + + + ++ + +Y G E LI +L G Sbjct: 205 DDKQVAYQAL-----------------LMFNHNDRISINQISTKYTSGAEKLLIKALLGV 247 Query: 194 RANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFS 253 A K NV T V + + K ++++ + Sbjct: 248 EI--------STGGFAVDKGIVCQNVATTKAV----------FDAVVDHKPLVSRIVTVT 289 Query: 254 GRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFES 313 G P +E+ G + ++ K ++ GG Sbjct: 290 GSGVKPNNFEVRLGASFESLISIA----SPSQKAHDYRMGGMMMGVDVTD---------- 335 Query: 314 IGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALER 373 +A T V N + A + C C C + P VK+L Sbjct: 336 -IQAPICKITNAI-----------FVSNHIQKPAIQECIRCGKCSEVCP--VKLLPQQLY 381 Query: 374 GEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLI 433 + +IE C + + L + + + + Sbjct: 382 WHTKSENIEKALNYNLADCIECACCDYVCPSHISLANYFSFAKT---------LNKQQTR 432 Query: 434 NGIQPNLLKERW 445 + N+ +ER+ Sbjct: 433 EQDRINIARERF 444 >UniRef50_C4Z9G3 RnfC/nqrF n=16 Tax=Bacteria RepID=C4Z9G3_EUBR3 Length = 443 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 85/388 (21%), Positives = 137/388 (35%), Gaps = 64/388 (16%) Query: 35 YEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEM 94 YE +T LS +EI+ +VK+AG+ G GGAGF T +K S E I Y++ N E Sbjct: 110 YESVE-DVTALSKEEIIEKVKNAGVVGMGGAGFPTHVKLSP---KEPDKIEYIIANCAEC 165 Query: 95 EPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAG 154 EP D M + P L+ GM I +G + + + L Sbjct: 166 EPYLTSDYRRMLENPEELIGGMKIILQLFDNAKGILGIEDNKPDCIEKLTE--------- 216 Query: 155 LLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPT 214 T + + V +Y G E LI + GR N + P Sbjct: 217 -------LTKDEPRIEVCPLMTKYPQGGERQLIYATTGRAINSKMLPA--------DAGC 261 Query: 215 CVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREI 273 V+NVET+ V + NG + ++ +G VKNP GT+ +E+ Sbjct: 262 IVDNVETIIAVYNAVKNG----------QPVLKRISTVTGDAVKNPSNILYSIGTSYQEL 311 Query: 274 LEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEI 333 ++ G K GG F LD+P S Sbjct: 312 VDAAGGFKSQPEK---IISGGPMMGFA-MFSLDIPTTKTS-------------------S 348 Query: 334 NMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGP 393 +++ + F ++C C C + P +++ + G G ++ E+ Sbjct: 349 SILCFTHDEVAAFEPQACINCGRCVEACP--EQLIPSRLAKFGLRGQMDEFEKWHGLECI 406 Query: 394 GKTFCAHAPGAVEPLQSAIKYFREEFEA 421 C+ A + + IK ++ A Sbjct: 407 ECGSCSFACPSRRQVAQPIKTMKKLVLA 434 >UniRef50_A0LLS5 Electron transport complex, RnfABCDGE type, C subunit n=3 Tax=Deltaproteobacteria RepID=A0LLS5_SYNFM Length = 440 Score = 237 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 90/423 (21%), Positives = 138/423 (32%), Gaps = 77/423 (18%) Query: 1 MKNIIRTPETHPL-----TWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVK 55 +K+I +P + T R +P SP+E++ +++ Sbjct: 83 VKSIGASPHPVRVEAPSVTIRRDPQAEPKVFTPSE-----------WEHFSPEELLEKIR 131 Query: 56 DAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEG 115 +AGL G GGAGF T LK S P + L+ NA E EP D M + PH ++ G Sbjct: 132 NAGLVGLGGAGFPTHLKLSPPP---GTRLDKLILNAAECEPYLNCDNRTMIEFPHEILTG 188 Query: 116 MLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGA 175 I L +I + EA L RA AE+ T D ++ V+ Sbjct: 189 ARIILRILGIKECHIGIENNKQEAIWVLSRAAAES------------TAPDCKISVNPLM 236 Query: 176 GRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEW 235 +Y G E LI ++ GRR P + V NV T + + Sbjct: 237 VKYPQGSEKQLIQTITGRRVPYPGLP--------FDVGVMVINVGTAKTIHDAVVLEKPL 288 Query: 236 YQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGG 294 Y +++ SGR + P + GT +I+ G M + GG Sbjct: 289 Y----------ERVVTISGRAIARPANLMVRIGTRLSDIVTFLGGTMDN---LARIVVGG 335 Query: 295 AGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWC 354 F DLP+ T+ + + + + C C Sbjct: 336 PMMGFSIPTT-DLPV----------MKTTSGVLFLSDDE---------IDSRPHGPCIRC 375 Query: 355 TPCRDGLPWSVKILRALERGE-GQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIK 413 C + + E G+ D Q F CA A PL + Sbjct: 376 GKCVEVCSMGLSPNEVGIYVEAGRARDTA---QFGVFECFECGACAFVCPAKRPLVQFTR 432 Query: 414 YFR 416 + Sbjct: 433 LAK 435 >UniRef50_C7NCF5 Electron transport complex, RnfABCDGE type, C subunit n=2 Tax=Fusobacteriaceae RepID=C7NCF5_LEPBD Length = 458 Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats. Identities = 65/373 (17%), Positives = 112/373 (30%), Gaps = 68/373 (18%) Query: 55 KDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVE 114 ++AG+ GGA F T +K+ + K + + N E EP D LM+ ++ Sbjct: 153 REAGIVELGGAQFPTHIKYDIKFK----KVETFIINGAECEPYLTSDYSLMKNFTKEILN 208 Query: 115 GMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTG 174 G+ + L I + E E L + Sbjct: 209 GIKVIEKLLNPKEIVIGIENENSNLVQKFEELAKEEK---------------VNLKIKLL 253 Query: 175 AGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVE 234 Y G E LIN++ G++ P + V+NV T+ + Sbjct: 254 PTIYPQGSELQLINTVTGKKVKKGELP--------LNQGVIVSNVGTVKAI--------- 296 Query: 235 WYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPG 293 Y + K +++ SG KN G +++ GT I+ + K + G Sbjct: 297 -YDAFFEGKPLVERIITISGEEAKNIGNYKVKIGTPLYHIVNELGI-----KKEEKVIFG 350 Query: 294 GAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGW 353 G D + GT+ + + E RESC Sbjct: 351 GPMMGI---EVFDSRIP--------VIKGTSGILFLSKEE------------IERESCIS 387 Query: 354 CTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIK 413 C C + P ++ + G E + + C + PL +IK Sbjct: 388 CGYCVEACPMNLMPFE--FADYYEKGKYEKMIKANIQNCIECGACEFVCPSRVPLIESIK 445 Query: 414 YFREEFEAGIKQP 426 + + Sbjct: 446 NGKAILSEMEENK 458 >UniRef50_D1KBG6 Electron transport complex protein RnfC n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KBG6_9GAMM Length = 502 Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats. Identities = 67/441 (15%), Positives = 128/441 (29%), Gaps = 89/441 (20%) Query: 1 MKNIIRTPETHPLTWR-----LRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVK 55 + I H + + D + W+ G ++ ++ Sbjct: 80 VIAINEQVIPHKSGIKSTCITIESDGKDEWVKN-------PGCGPDFLHCDTSTMIEYIR 132 Query: 56 DAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEG 115 +G+ G GGAGF T K + + + L+ N E EPG D LM+ P ++ G Sbjct: 133 ISGIVGLGGAGFPTHTKVA-----RAQDCHTLIINGTECEPGVMCDDALMQYYPREVIRG 187 Query: 116 MLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGA 175 + I A R I + + EA +L + + + + Sbjct: 188 VEILLHICGASRAIIAVENDKQEAFNSL-----------------LMYNHNERISIVHIP 230 Query: 176 GRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEW 235 +Y G E LI +L G P NV T + Sbjct: 231 TKYTSGAEKLLIKALLGVEVPSGGFAP--------DLGVVCQNVATTKAI---------- 272 Query: 236 YQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGG 294 + + +SK ++++ +G V+ P +E+ G++ ++ + + + GG Sbjct: 273 FDAVVESKPLVSRIVTVTGSGVEKPNNFEVRLGSSFDHVIAM----SQPNKRSHDIRMGG 328 Query: 295 AGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWC 354 + GK T D A + C C Sbjct: 329 MMMGVDVKD-----------GKVPICKITNGIFVNDQSKKP-----------AAQECIRC 366 Query: 355 TPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKY 414 C P V +L + + + C + + PL + Sbjct: 367 GACNQVCP--VSLLPQQLYWYAKSENTDKAMDYNLADCIECRCCDYVCPSHIPLAEYFSF 424 Query: 415 FR--------EEFEAGIKQPF 427 + +++ I + Sbjct: 425 AKALHRKTTDDQYRTDIARER 445 >UniRef50_B5HXD6 Oxidoreductase n=2 Tax=Streptomyces RepID=B5HXD6_9ACTO Length = 505 Score = 237 bits (604), Expect = 8e-61, Method: Composition-based stats. Identities = 97/398 (24%), Positives = 168/398 (42%), Gaps = 18/398 (4%) Query: 38 ARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKD--ESMNIRYLLCNADEME 95 L + +++ + LKGRGGAGF K + + + ++ N E E Sbjct: 5 VHGPLEPMGGEQLAKLSEAINLKGRGGAGFPFHKKLRSVAEAAIKRGVRPVVVVNGSEDE 64 Query: 96 PGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGL 155 P KD +L+ + PHL+++G L++A AL A I + E + ++ A+AE + Sbjct: 65 PACRKDTVLINRAPHLILDGALLAAEALGARTLVIGVTRESTQ--RSMEAALAERGLSN- 121 Query: 156 LGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTC 215 G V R + G +LI S++G A P + + +G G PT Sbjct: 122 ------GRRSALRARVQRNPVRMVTGAAASLIRSIDGGPAIPPGRKVSASQNGVGGAPTL 175 Query: 216 VNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILE 275 ++N ET + G E Y N + GT ++ SG V P + E+P G R +L+ Sbjct: 176 LSNAETFAQLAIAARIGPERYGNTGLYDEPGTVMLTVSGAVARPMVIEVPTGVPLRYVLQ 235 Query: 276 DYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLP-MEFESIGKAGSRLGTALAMAVDHEIN 334 + GG ++ A ++ + S+ G LG + + E Sbjct: 236 LAGAPPVP----QGVLTGGYHGKWIDAATVNEAIVSRNSLDAVGGALGAGAILPITQETC 291 Query: 335 MVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPG 394 + + ++ A ES G C PC GLP + + + + G G P +E L+Q+ + + Sbjct: 292 PLGESLRVAQWLAEESAGQCGPCYLGLPAAARGMEDILNGGG-PAALEALKQVAKNVKR- 349 Query: 395 KTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHL 432 + C+H G+ L+S IK F ++ A + + Sbjct: 350 RGACSHPDGSAMFLESTIKAFTDDLAAHVLGNGCGRPV 387 >UniRef50_C4RMV1 Oxidoreductase (Fragment) n=6 Tax=Actinomycetales RepID=C4RMV1_9ACTO Length = 382 Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 87/375 (23%), Positives = 148/375 (39%), Gaps = 26/375 (6%) Query: 35 YEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLM--PKDESMNIRYLLCNAD 92 +E + + P ++ + LKG+GGAGF K + + ++ NA Sbjct: 31 HEEVHGPIGPMEPANLLRLAEAIQLKGKGGAGFPFARKLRAVLESCERQDASAIVVVNAT 90 Query: 93 EMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATE 152 E EP ++KD++L+ + PHL+++G + A+AL A I + + + +L A+ E Sbjct: 91 EGEPASWKDKVLLARAPHLILDGAALVAYALDADEIVIGVADDDV-GRPSLTEALQERR- 148 Query: 153 AGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGK 212 + T R+I GE AL+N + G P + SG G Sbjct: 149 ------------MPVPTSMVTVPDRFISGEGGALVNGINGLPHIPPGTKKRSSDSGVNGL 196 Query: 213 PTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTARE 272 PT ++N ET + G Y + + GT L+ +G K P + E GT R+ Sbjct: 197 PTLLSNAETYAQLAVAARLGPYEYAALGTDDEPGTLLLTVTGAAKRPAVVECAAGTPLRD 256 Query: 273 ILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDL-PMEFESIGKAGSRLGTALAMAVDH 331 ILE + DG GG ++T + + + G LG + + + Sbjct: 257 ILELCE--VPDG---PGVLMGGYHGKWITAEAAQRAEVSRKGLTAVGGTLGAGIIVPLGR 311 Query: 332 EINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFL 391 + + + + A ES G C PC+ GLP + + G + + Sbjct: 312 DTCPLGEAAQVVRYLAGESAGQCGPCKMGLPDLARAVDLAVSGSAPIE----IVRAAAGD 367 Query: 392 GPGKTFCAHAPGAVE 406 G+ C+H G Sbjct: 368 VKGRGACSHPDGTAR 382 >UniRef50_C1V5Z7 NADH dehydrogenase subunit F n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=C1V5Z7_9EURY Length = 513 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 102/437 (23%), Positives = 169/437 (38%), Gaps = 41/437 (9%) Query: 6 RTPETHPL-TWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGG 64 P+ PL R + W++ E A++ + + ++ GL GRG Sbjct: 107 PVPDEGPLRVGCRRVLGRCGWVNPTEPPT--ESVLDAVSD-DSESVCTEIHRIGLLGRGR 163 Query: 65 ----AGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISA 120 A W+ K + + L+ NA++ + D L+E +V+ + A Sbjct: 164 GDARADRPVAEGWATARKTDGDTV--LVVNANDADERNRTDSTLVEGDAGGVVDAAMAVA 221 Query: 121 FALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYIC 180 ++A ++ AA L A + + + V G RYI Sbjct: 222 HLVEAEDVIMYA-QTGSMAAERLSAAASRYRDE-----------YGDAPQVAVGPERYIA 269 Query: 181 GEETALINSLEGR-RANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNI 239 GE T + SLEG R R +PP P T G +G+PT ++ TL V + E+ + Sbjct: 270 GEPTMALESLEGNDRLEARLRPPGPETHGLYGRPTVIHTPRTLLQVREAILRPEEFDAD- 328 Query: 240 SKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDF 299 D GT+++ +G V +P EL G R D + K GG Sbjct: 329 --DADPGTRVVTVTGDVDSPATVELTTGAPLRAAAAAV-----DRTETKMAIVGGQFGGV 381 Query: 300 LTEAHLDLPMEFESIGKAGSRLGT-ALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCR 358 HLD + ++ G+ LGT + + ++ V + F + E+CG C PCR Sbjct: 382 T--RHLDHTLSAPALS--GANLGTEGVVELFGDDRCALATVGSRARFASEENCGRCVPCR 437 Query: 359 DGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREE 418 +G +LR + G+ D +TL +L R + + C A +++A+ F E Sbjct: 438 EGTTQLTDLLRDIYAGDY---DDDTLRELTRTMR-NTSTCDFGRSAARTVETAMAAFEAE 493 Query: 419 FEAGIKQPFSNTHLING 435 FEA T + Sbjct: 494 FEAH-THGRCPTGQCDA 509 >UniRef50_D1VUL2 Electron transport complex protein RnfC n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUL2_9FIRM Length = 446 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 73/381 (19%), Positives = 126/381 (33%), Gaps = 61/381 (16%) Query: 48 DEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQ 107 D+++ VKD G+ G GGAGF K K E+ + + N E EP D +M + Sbjct: 125 DDLIPFVKDMGIVGMGGAGFPLHAKL----KGENPPLDECIINGAECEPFLTCDHRIMLE 180 Query: 108 LPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDF 167 ++EG+ I +F Y+ + +A + I++ L Sbjct: 181 RTEEILEGLDIFSFFYNQKASYMAIEENKPDAIAKMEEVISKHPNWSHL----------- 229 Query: 168 ELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPA 227 V +Y G+ L ++ GR G + + NV T Sbjct: 230 --KVVGCQTKYPQGDSKRLSEAVIGRIVPQNG---VTNDVGLF-----LTNVGTTLAFSE 279 Query: 228 ILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLK 286 + G Y +++ SG +K P + GT EIL+ G + D Sbjct: 280 AMVKGKPTY----------ERVITVSGSGIKEPKNILVKIGTPVGEILDFCGGVVEDY-- 327 Query: 287 FKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFF 346 K GG T +L+ P+ + + + + D E N + Sbjct: 328 -KEIICGGPMTGKSV-FNLNSPITKTT---------SGILVFTDKEENSIE--------- 367 Query: 347 ARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVE 406 C C+ C D P ++ G ++ E+L C+ A Sbjct: 368 -ESPCIRCSRCVDHCPANINPTD--INAAILRGRLDICEELHADQCMECGICSFVCPAKR 424 Query: 407 PLQSAIKYFREEFEAGIKQPF 427 L ++ K + E + + Sbjct: 425 HLSASTKLAKREIKMAQRAKR 445 >UniRef50_C7Q9V1 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q9V1_CATAD Length = 418 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 123/419 (29%), Positives = 178/419 (42%), Gaps = 42/419 (10%) Query: 8 PETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGF 67 P + PL D ++ D Y GY LSPD +VN++K AGL+GRGGAGF Sbjct: 9 PGSAPLLGERPDRREAR--DAYWHAGGYR-------DLSPDLLVNRIKAAGLRGRGGAGF 59 Query: 68 STGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYR 127 K + S+ + ++ N E EPG+ KDR LM PHL+++GML +A +A R Sbjct: 60 PAAAKLLAVRAAGSVPV--VVANGGEGEPGSVKDRWLMRARPHLVLDGMLRAADITRAAR 117 Query: 128 GYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALI 187 Y+++ + EAA ++RRA+AE + A Y+ GEETA++ Sbjct: 118 CYVYVADD--EAAESMRRALAEREPY-------------VPTQIVRVAHTYVAGEETAVV 162 Query: 188 NSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGT 247 + G A P +KPP P SG G PT V NVETL + + A + + Sbjct: 163 RRINGGPALPTAKPPRPFESGVDGVPTLVANVETLARIALLAAR----------PQTPDS 212 Query: 248 KLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDL 307 L+ SG P L E P GT+ + + D L GG L L Sbjct: 213 LLLTVSGPGLEPELVEAPVGTSLQALAYRA-----DRLGTPGVLMGGMFGGILDPRGLRT 267 Query: 308 PMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKI 367 +E ++ AGS LG + V+L F A ES C C G + Sbjct: 268 ELEAAALTAAGSALGCGAVHFLAPGECPVALAAEGLAFLADESSRQCGVCVTGTAALART 327 Query: 368 LRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQP 426 + + G +P D+ L + + L + C A S ++ F EA I+ Sbjct: 328 MASAVHGTAEPDDLARLSKWSQSLRR-RGACGLLDAAANLAASLLRSFGPLTEAHIEGR 385 >UniRef50_Q9HYB8 Electron transport complex protein rnfC n=12 Tax=Gammaproteobacteria RepID=RNFC_PSEAE Length = 774 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 80/427 (18%), Positives = 122/427 (28%), Gaps = 76/427 (17%) Query: 1 MKNIIRTPETHP-----LTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVK 55 + I P H + D W + + + SP ++ +++ Sbjct: 81 VVAIGAHPYPHASGLPAPAIVIASDGLERWTELHPCPD--------FRAESPLALLERIR 132 Query: 56 DAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEG 115 AG+ G GGAGF T K + I L+ N E EP D LLM + ++ G Sbjct: 133 AAGIGGLGGAGFPTAAKL---AARPAEKIHTLVVNGAECEPYISADDLLMRERATQVLGG 189 Query: 116 MLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGA 175 + I L + + + EA L A+ E + Sbjct: 190 IDILVQILCPEEVLVGIEDDKPEAIAALGAALGERP-----------------YRIVALP 232 Query: 176 GRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEW 235 RY G E LI L GR PA NV TL V + G Sbjct: 233 TRYPSGGERQLIQLLTGREV--------PADGLPADIGILCQNVGTLAAVHDAVVLG--- 281 Query: 236 YQNISKSKDAGTKLMGFSG-RVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGG 294 + +++ +G ++ P E GT E+L + + GG Sbjct: 282 -------RPLISRITTLAGGALERPMNVEALIGTPVHELLAFAG---LAEGRLERVLMGG 331 Query: 295 AGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWC 354 F L +P+ + L E C C Sbjct: 332 PMMGFALPD-LSVPLIKTC------------------NCLLAGDATELPEPVPAMPCIRC 372 Query: 355 TPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKY 414 C P V +L + E L F CA+ + PL + Sbjct: 373 GDCAQVCP--VSLLPQQLHFFALGDEHEQLLAHNLFDCIECGACAYVCPSSIPLVQYYRA 430 Query: 415 FREEFEA 421 + E Sbjct: 431 SKAEIRE 437 >UniRef50_B0MQ91 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MQ91_9FIRM Length = 432 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 65/388 (16%), Positives = 107/388 (27%), Gaps = 65/388 (16%) Query: 41 ALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYK 100 T + ++ + V+++G G GGAGF T LK PK+ +L+ N E EP Sbjct: 108 PPTVENREQFLQAVRNSGSIGLGGAGFPTSLKLGFDPKE--KQPDFLIINGAECEPYITS 165 Query: 101 DRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNI 160 D + ++EG+L+ L + I + +A + + + Sbjct: 166 DYRCFMEEGEDVLEGVLLMLKYLGIPKCIIGIEKNKPKAIEKMTKLCEK----------- 214 Query: 161 MGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVE 220 + V Y G E LI S GR + P V N Sbjct: 215 -----HDNITVKPLKSSYPQGAEKTLIFSTTGRVVKEGTLP--------LASGCIVINSS 261 Query: 221 TLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAG 279 T + + G+ + + + G VK P + +P G + EI+ Sbjct: 262 TAAFIAQYIRTGMPLVK----------RRITVDGNIVKKPSNFIVPVGMSIGEIVY---- 307 Query: 280 GMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLV 339 K GG D P+ + Sbjct: 308 YAELSDKPDRIILGGPMMGAC-AFDPDYPLSKT----------NNAVLMFADSPV----- 351 Query: 340 RNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCA 399 + C C C +L D LE+L L C+ Sbjct: 352 ------YEPSECIRCGKCVKACSM--NLLPTELEHAFDMRDARRLEKLKVNLCVNCGACS 403 Query: 400 HAPGAVEPLQSAIKYFREEFEAGIKQPF 427 A L + + + Sbjct: 404 FVCPAKRNLAEKNQLAKAFLREQSTRKG 431 >UniRef50_C5SAZ1 Electron transport complex, RnfABCDGE type, C subunit n=2 Tax=Proteobacteria RepID=C5SAZ1_CHRVI Length = 482 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 75/376 (19%), Positives = 120/376 (31%), Gaps = 61/376 (16%) Query: 42 LTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKD 101 ++ +I+ V+DAGL G GG F + +K I +L N E EP D Sbjct: 150 PEQMNVKDIIQAVQDAGLVGLGGGAFPSHVKMQPPA---GRVIHTVLVNGCECEPYLTCD 206 Query: 102 RLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIM 161 +M + L+ G+ I+ A +A R I + ++A +LR + Sbjct: 207 HRIMLEQTENLIRGIRIALRATRAERAIIGVEDNKLDAVSHLRARL-------------- 252 Query: 162 GTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVET 221 + V +Y G E LI +L PA V NV T Sbjct: 253 --PKHLPITVEAVRTKYPQGAEKMLITALLDAEV--------PAGGLPADVGVAVFNVGT 302 Query: 222 LCNVPAILANGVEWYQNISKSKDAGTKLMGFSG-RVKNPGLWELPFGTTAREILEDYAGG 280 L + ++ G +++ SG VKNPG + +P GT R +L+ Sbjct: 303 LAQMGELVPRGQGL----------IERVVTVSGPAVKNPGNFLVPIGTPVRFLLDQVGF- 351 Query: 281 MRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVR 340 GG + LD+P+ + + + +L R Sbjct: 352 ---KGPLGQVILGGPMMGMAVAS-LDVPVTKSV---------SGVVALEPED---PALAR 395 Query: 341 NLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAH 400 C C C P S+ E + + EQ CA Sbjct: 396 RQVY-----PCIKCGECLRACPVSLNPSMLGELAVAREYGVM-AEQFNLDQCFECGCCAF 449 Query: 401 APGAVEPLQSAIKYFR 416 + PL + + Sbjct: 450 VCPSNIPLTQYFRIAK 465 >UniRef50_Q73PG1 Na(+)-translocating NADH-quinone reductase, A subunit n=2 Tax=Treponema RepID=Q73PG1_TREDE Length = 480 Score = 228 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 73/406 (17%), Positives = 133/406 (32%), Gaps = 56/406 (13%) Query: 9 ETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFS 68 E H +T + + +DE + + T + +E + +V+DAG+ G GGA F Sbjct: 84 EPHLVTGNTENLCFLIEIDEENRE-EFMPPLDPFT-CTKEEALKRVRDAGITGMGGASFP 141 Query: 69 TGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRG 128 T +K S P I Y++ N E EP D + +V+G+ I+ + A +G Sbjct: 142 THVKLSPPP---DAKIEYVIANGAECEPYLCTDAATIFSDSDSIVDGLAITMRIVGAKQG 198 Query: 129 YIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALIN 188 I L + L +AI++ + +++ V +Y G E L + Sbjct: 199 IIALEDNKKDLVPVLEKAISKIKANPIAA-------GAYDISVQLCKTKYPQGGEKTLTD 251 Query: 189 SLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTK 248 ++ R P+ + + NV TL + G K + Sbjct: 252 AVVNREI--------PSGGLPFQIGCVIQNVGTLKAISEAFRLG----------KPLIDR 293 Query: 249 LMGF-SGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDL 307 + G + P P GT +++ + GG F + + D Sbjct: 294 ALTIGGGACEKPLNVIAPIGTCVGDLIPSV---VSLKPGVVKIISGGPMMGFAMK-NADF 349 Query: 308 PMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKI 367 P++ T+ + + E + C C C D + Sbjct: 350 PIQKN----------TSGVLFLTKEEISLE---------EESPCIGCGKCIDVCSCHLSP 390 Query: 368 LRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIK 413 + + G+ E + CA+ A L +K Sbjct: 391 VLIVRALNA--GNTEEAIRCGLLDCVECGTCAYTCPARIKLVQRVK 434 >UniRef50_A9NEB0 NADH oxidoreductase complex RnfABCDGE type, C subunit n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NEB0_ACHLI Length = 432 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 67/372 (18%), Positives = 129/372 (34%), Gaps = 63/372 (16%) Query: 42 LTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKD 101 + L+ ++ VN K+AGL G GG+GF T +K + I +L N E EP D Sbjct: 116 IDKLTKEDYVNITKEAGLVGLGGSGFPTYIKLNT-----KNKIDIILANGVECEPKLISD 170 Query: 102 RLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIM 161 +M + P L+ G++ + A+ A +G I ++ Y+E +R ++ TE Sbjct: 171 YEVMMESPDELIRGLIYAMKAVGAPKGVIAVKKRYVELVERIRFSLNSYTE--------- 221 Query: 162 GTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVET 221 +++ V Y G E I + G + + PA G NV T Sbjct: 222 -----YDIKVVPVGNHYPQGWELEAIEAATGIKVP---QFKLPADYG-----IIPFNVST 268 Query: 222 LCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGM 281 L ++ Y + + + SG ++ GT + +++ G + Sbjct: 269 LQSI----------YHAVKFNLPVLERYFVLSGDGVVNKSFKARIGTPIQSLIQLAGGYV 318 Query: 282 RDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRN 341 D K GG ++ + + L ++ ++ + Sbjct: 319 -DKAVPKTLIMGGPMMG------SNVTNDDIVTTHTATSLIVQNSLLLNED--------- 362 Query: 342 LEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHA 401 C C C P ++ ++ + + D + L+ L C+ Sbjct: 363 --------PCIHCASCVYSCPVQIQPVQIMNAVKA--NDKDFLKALSVNKCIECGLCSFV 412 Query: 402 PGAVEPLQSAIK 413 + L ++ Sbjct: 413 CPSKIHLTDYMR 424 >UniRef50_A1SNE6 Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit n=1 Tax=Nocardioides sp. JS614 RepID=A1SNE6_NOCSJ Length = 412 Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 89/372 (23%), Positives = 156/372 (41%), Gaps = 31/372 (8%) Query: 61 GRGGAGFSTGLKWSLMPKDESMNIR-YLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLIS 119 GRGGA F +K R ++ N E EP + KD L PHL+++G + + Sbjct: 59 GRGGAAFPFEVKLRTAADRSRQGRRPVVVVNLSEGEPASAKDSALALTRPHLVLDGAVAT 118 Query: 120 AFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYI 179 A+AL A ++ + E +R A+AE + +HT GR++ Sbjct: 119 AYALGARELHVVVPQERPLVGTAIRAALAERRDR-------------LRTHLHTAQGRFV 165 Query: 180 CGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNI 239 G+ A++ + GR P + A +G G+PT ++N ET V ++ G E Y + Sbjct: 166 AGQARAVLELMAGRPNLPVTAWSPEAVAGHRGRPTLLSNAETWAQVGRLVLAGEERYAAL 225 Query: 240 SKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDF 299 + + GT L+ S + E+ G+ R++L + G ++ GG + Sbjct: 226 GSADEPGTTLLTLSAATST--VVEVELGSPWRDVLPEAWAG-------RSLLVGGFHGAW 276 Query: 300 LTEAHLDL-PMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCR 358 + A L + +++ A + LG + +A V+ + ++ A +S C PC Sbjct: 277 VPWATLVAGRVSVDAMRAAETPLGAGVVVA--PRGCPVAFTARVVDYLAAQSARRCGPCL 334 Query: 359 DGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREE 418 +GLP + ++ + G G P +E L L G+ CAH G ++S + F +E Sbjct: 335 NGLPALARAVQEVVDGAGHPERVEGLAALVT----GRGACAHPDGTARLVRSMLATFPDE 390 Query: 419 FEAGIKQPFSNT 430 Sbjct: 391 VTRHAT-GRCTA 401 >UniRef50_UPI0001B56646 respiratory-chain NADH dehydrogenase domain-containing protein n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B56646 Length = 347 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 106/384 (27%), Positives = 159/384 (41%), Gaps = 44/384 (11%) Query: 45 LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLL 104 + D +++++ AG++GRGGAGF K + S ++ N E +P + KDR L Sbjct: 1 MDRDALIHEIDVAGIRGRGGAGFPAAAKLRSVAPGRS----IVVANGCESDPFSSKDRAL 56 Query: 105 MEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTG 164 +E PHL+++G+ ++A A+ A Y+ LR E ++ A+AE +A + + Sbjct: 57 LELAPHLVLDGIQVAAHAVGATEAYLCLR----EGNRSVLAALAERRDAVPVKVVAVP-- 110 Query: 165 FDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCN 224 RY+ EETAL++ L A P K P P G G+PT V NVETL Sbjct: 111 -----------HRYVASEETALVHFLGSGDARPTGKFPRPTERGLRGRPTLVQNVETLAR 159 Query: 225 VPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDG 284 + G + + T L+ +G V PG+ E+P T IL G + Sbjct: 160 FALVARTGADRFVP--------TDLVTVTGAVARPGVMEVPADTPVSAILARAGGSVTA- 210 Query: 285 LKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEE 344 +A GG G ++ + D G G + + V L RN+ Sbjct: 211 ---QAVLIGGYGGTWMPRSLADP-------LPLGREPGLSSLHLLPDSHCGVELTRNILH 260 Query: 345 FFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGA 404 A ES C PC GLP L G G + L G+ CAH GA Sbjct: 261 TLAGESARQCGPCMFGLPAVAADFTDLLSGRDATGRLARRLPLLS----GRGACAHPDGA 316 Query: 405 VEPLQSAIKYFREEFEAGIKQPFS 428 V SA++ F + A + Sbjct: 317 VRLAASALRVFAADVHAHLTAGSC 340 >UniRef50_D2MNP9 Electron transport complex, RnfABCDGE type, C subunit n=2 Tax=Erysipelotrichaceae RepID=D2MNP9_9FIRM Length = 438 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 77/386 (19%), Positives = 137/386 (35%), Gaps = 71/386 (18%) Query: 41 ALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYK 100 T S +E+++ VK+AG+ G GGAGF T +K+ + I L+ NA E EP Sbjct: 114 DYTKASREELLDFVKNAGIMGLGGAGFPTYVKYMKV-----DGIDMLIINAVECEPFLTA 168 Query: 101 DRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNI 160 D ME+ G+L A + + ++ + E L A E+ Sbjct: 169 DYKAMEENMDSFKLGVLALWKLSAAPKAVVAIKEDKKEMIAKLEEAFVESG--------- 219 Query: 161 MGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVE 220 + + Y G E L L ++ R P+ G VNN Sbjct: 220 --------VEIKAVPDMYPMGYERTLAYQLT-KKNYDR----LPSEIGL-----IVNNAN 261 Query: 221 TLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAG 279 T + L G+ K + SG VK P +P GT + E+L+ G Sbjct: 262 TAIALGKALVTGM----------PITHKYVTVSGDAVKKPQTVYVPVGTISGELLKAV-G 310 Query: 280 GMRDGLKFKAWQPGGAGTD-FLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSL 338 G+++G++ GG + ++ N V++ Sbjct: 311 GVKEGIEDILMINGGPMMGRAIPNNQW----------------------SISQSTNGVTV 348 Query: 339 VRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFC 398 +++++E +C C C D P ++ +R + + D + L +L C Sbjct: 349 MKHIKE--EAINCLRCGACVDHCPMGLEPVRIADEHK--VVDYDHLVKLRVTDCIECGLC 404 Query: 399 AHAPGAVEPLQSAIKYFREEFEAGIK 424 + + + ++ + A +K Sbjct: 405 TYVCPSKIDMTEKMRRAKTFVGAKMK 430 >UniRef50_A6NT39 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NT39_9BACE Length = 454 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 69/370 (18%), Positives = 113/370 (30%), Gaps = 71/370 (19%) Query: 49 EIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQL 108 E+++ V+ +GL G GGAGF T +K + + L+ N E EP D + M Sbjct: 142 ELLDAVRKSGLVGLGGAGFPTWVKLNAT-------VDRLVINGSECEPYCTVDYIAMRDY 194 Query: 109 PHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFE 168 + EG+ I L + + ++ G G D Sbjct: 195 AADMAEGVRIVKTLLGIEKAIVGVK-------------------HPPKGLEDAFKGMD-G 234 Query: 169 LFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAI 228 + + Y G E LI+ GR P V NV T + Sbjct: 235 VEIKQLREYYPVGAEKMLIHETTGRVV--------PGGKLPKDAGCIVLNVNTAAFIARY 286 Query: 229 LANGVEWYQNISKSKDAGTKLMGFSG-RVKNPGLWELPFGTTAREILEDYAGGMRDGLKF 287 L G+ +K + G V P + P GT ++ G + K Sbjct: 287 LRTGMPL----------VSKTVSVDGSAVNTPSVITAPIGTPVGDLFAAAGGFKGEPAKI 336 Query: 288 KAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFA 347 A GG ++F + + V+L + A Sbjct: 337 FA---GGPMMGIALPD-----LDFPLLW---------------NNNGFVALNQKDAAKPA 373 Query: 348 RESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEP 407 +C C C D P ++ + + D+E L + L C++ A Sbjct: 374 TTACIRCGRCVDHCPMNLMAFEISKA--YEQRDVEWLRSIRADLCIECGCCSYVCPARRD 431 Query: 408 LQSAIKYFRE 417 L + K + Sbjct: 432 LVTNNKLAKR 441 >UniRef50_Q5V638 Putative NADH dehydrogenase I, F subunit n=1 Tax=Haloarcula marismortui RepID=Q5V638_HALMA Length = 507 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 79/370 (21%), Positives = 139/370 (37%), Gaps = 29/370 (7%) Query: 65 AGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALK 124 A W + + + ++CNA++ D L+ P +++G+ A + Sbjct: 162 ADEPVADTWETASETDGDPV--VVCNANDASDLPTGDDTLLSGAPMAVLDGIAAVAEYVD 219 Query: 125 AYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEET 184 A +++ + +LR AI A + + + G + GE T Sbjct: 220 AGDAVVYVNESQTDVQADLREAIDAAADTLPVVP-----------QLVAGPDEFRAGEPT 268 Query: 185 ALINSLEG-RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSK 243 A + +LEG R PR +PP PA G +G+PT V+ T V +A+ + + Sbjct: 269 AALEALEGADRIEPRLQPPSPAKRGLYGRPTVVHTPRTFAQVQQAVADPGSVDADAA--- 325 Query: 244 DAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEA 303 D GT+++ +G V + EL + + + + FK GG Sbjct: 326 DPGTRIVAVAGDVADSATVELRSSASLAAVRKA----VEMDGSFKMACVGGVLGGVT--R 379 Query: 304 HLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPW 363 LD+ +S+ AG + D V V F + E+ G C P R+G Sbjct: 380 SLDMAPTAQSLRAAGLGTN-GVVELFDTGRCTVETVGKRARFASMENSGRCVPGREGTKQ 438 Query: 364 SVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGI 423 ++LR + G + + + +L R + + C A P+ +AI F EF A Sbjct: 439 LAELLRDIYDG---SFENDKIRELSRVMRQ-SSNCQTGAHAPRPVTTAIDEFEPEFRAH- 493 Query: 424 KQPFSNTHLI 433 + Sbjct: 494 TDGHCPSGTC 503 >UniRef50_C7LYX8 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LYX8_ACIFD Length = 408 Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats. Identities = 102/412 (24%), Positives = 159/412 (38%), Gaps = 45/412 (10%) Query: 20 DKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKD 79 D P+ LD +R+ G R L + GRGGAGF K + + Sbjct: 29 DAPPLSLDAHRAIYGSLPPRPPLAT-----------AEHIVGRGGAGFPLARKLAAVASQ 77 Query: 80 ESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEA 139 R ++ N E EPG KD+ L+ PHL+++G+ ++ L+A + + A Sbjct: 78 RG--PRVVVANGAESEPGARKDKALLTHAPHLVLDGLGLATRLLEAREAIVAVED--ATA 133 Query: 140 AVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRS 199 A L RAI E ++A + V Y+ G+ETAL+ +LEGR A PR Sbjct: 134 ADVLERAIRERSDA---------------VRVALLDRSYLTGQETALLAALEGRPALPRF 178 Query: 200 KPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISK-SKDAGTKLMGFSGRVKN 258 + A G +PT V NVETL G W+Q+ D T+++ + Sbjct: 179 QLARVAERGYKSRPTLVANVETLAQWALAARFGTSWHQSAGTRGHDRSTRIVSIALPGST 238 Query: 259 PGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAG 318 P + EL G T R +L+ G+ GL G + A + ++ Sbjct: 239 PTVVELAPGATVRSLLDAV--GVTTGLALVGGLFGELISVADERAMARVLVDRADSSDE- 295 Query: 319 SRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQP 378 LG + +V L + + E G C PC GLP + L +P Sbjct: 296 LALGAGSVLLAPSATCVVCATSELVGYLSEERAGQCGPCDRGLPELARAL----GAGARP 351 Query: 379 GDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNT 430 ++ T+ +L + CA A L +AI + ++ Sbjct: 352 AELATVARL----IARRGACALPDAAAH-LATAIT--PADAAGHQRRRCHER 396 >UniRef50_B1CC51 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CC51_9FIRM Length = 357 Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 95/404 (23%), Positives = 169/404 (41%), Gaps = 68/404 (16%) Query: 16 RLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSL 75 + P+ LD+Y + GYE + K + + ++++ +KDA L R K + Sbjct: 19 KYCGAVNPICLDDYVAFGGYEASSKVVN--NEVDVISILKDANLVAR--------KKLNE 68 Query: 76 MPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGE 135 + D ++C + +P D + + PH++VE M+I A +G I + E Sbjct: 69 LCADRWSGAETVVCETE--DPMATLDLKVQTEAPHVIVEAMIIFMHVNNAKKGVIVVNDE 126 Query: 136 YIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRA 195 A L +A+ +A AGL K+I+ + + Sbjct: 127 --LAYNRLNKAVTDAKNAGLNDKDIIVSKVSID--------------------------- 157 Query: 196 NPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR 255 G N + L NV AI+ N + + G K + G+ Sbjct: 158 ------------GLKE------NAQLLANVVAIVQN------SYKPAPAKGLKGVAIGGK 193 Query: 256 VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIG 315 VKNPG++E+ GTT R+++E+ AGG K KA + G ++L+ LD + F S+ Sbjct: 194 VKNPGVYEIEDGTTYRKLIEEIAGGATG--KVKAIKVGAPYGEYLSSDILDEKINFMSLM 251 Query: 316 KAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGE 375 G GTAL + +D +M + + F SCG C PC+ G ++++ + +G Sbjct: 252 MNGMVRGTALIVVLDESTDMAKEISDYLGFLLNVSCGKCFPCKVGTKRMDEMVKEVVKGN 311 Query: 376 GQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEF 419 + ++ + + G T C P+ +A++ FR++F Sbjct: 312 ATKENYNMIKSIAVNMNIG-TLCPIGQKGAVPVLTALENFRDDF 354 >UniRef50_C7H9I3 Electron transport complex, RnfABCDGE type, C subunit n=2 Tax=Faecalibacterium prausnitzii RepID=C7H9I3_9FIRM Length = 455 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 72/419 (17%), Positives = 119/419 (28%), Gaps = 65/419 (15%) Query: 11 HPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTG 70 P V + + + A KA + V++ GL G GGAGF T Sbjct: 100 EPFRLSNGRMCDSVVIKTDGKQT-VDPAVKAPEVTDKASFLAAVRECGLVGLGGAGFPTD 158 Query: 71 LKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYI 130 +K + LL NA E E D M +V G+ + I Sbjct: 159 VKLQP-----KQTVDTLLINASECEVWLTSDTQEMLNCSDDIVRGIEAVLKYTGIPKCII 213 Query: 131 FLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSL 190 + E L + + + V Y G E LI Sbjct: 214 GIENNKPECIELLTQKTKDKPA----------------IEVKALPSVYGTGAELILIEKC 257 Query: 191 EGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLM 250 GR P V NV ++ + LA G+ ++ + Sbjct: 258 LGREV--------PHGGLPADAGAIVMNVTSVSTLGKYLATGM----------PVVSRCI 299 Query: 251 GFSGR-VKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPM 309 G P +P GT ++L G++ G++ GGA +L P Sbjct: 300 TVDGDACAKPQNLIVPVGTAYEDVLNAA--GIKGGVELGKVVAGGAMMGPAV-ENLSYPT 356 Query: 310 EFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILR 369 + G ++ L E C C C + P ++ + Sbjct: 357 TKTTSG-------------------LIMLSAAAAEPPQVNPCIRCGRCVEYCPMGLEPVE 397 Query: 370 ALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFS 428 + + D++ L +L C A P + + + IK+ + Sbjct: 398 VNQAYAAR--DVQELGKLHVDYCFNCGSCTFVCPAKRPCTQMMGLAKAFYLGEIKKGGN 454 >UniRef50_A1SQ39 Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit n=1 Tax=Nocardioides sp. JS614 RepID=A1SQ39_NOCSJ Length = 412 Score = 214 bits (544), Expect = 7e-54, Method: Composition-based stats. Identities = 93/370 (25%), Positives = 143/370 (38%), Gaps = 29/370 (7%) Query: 61 GRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISA 120 GRGGA F K +P +L N E EP + KDR LM PHL+++G L A Sbjct: 52 GRGGAAFPVATKLLAVPTGSRTQ---VLVNGSESEPASRKDRTLMTLTPHLVLDGALAVA 108 Query: 121 FALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYIC 180 AL+ I + A +LR A+ E + + AGR++ Sbjct: 109 RALRTRHVTIAVHD--AAALASLRTALDER---------ARDEPIHERVDLRRTAGRFVS 157 Query: 181 GEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNIS 240 GE AL+ L+G A P S+ P+ SG G PT +NVET V +++ G + + Sbjct: 158 GEVRALLRGLDGGPAVPPSRRTLPSDSGLRGAPTFASNVETFAQVALLVSLGATEFGAVG 217 Query: 241 KSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFL 300 ++ GT L+ G + G+ E+P +L G GG ++ Sbjct: 218 NPEEPGTTLLTLLGDTRTQGVVEVPTDLPLDALLPGAGG---------PVLVGGYHGRWV 268 Query: 301 TEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDG 360 + L + AG L + + E+ ++ V + + A +S G C PC G Sbjct: 269 RDVD-GLAAARPGLRAAGLPLNAGVVARLPREVCALAEVTAVTRWLAAQSAGQCGPCLYG 327 Query: 361 LPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFE 420 + L G P L L G+ CAH G + +A+ +E E Sbjct: 328 TAALAHDVGELLHGRAAPAVEARLRGL-----VGRGACAHPDGTTAFVSTALATLGDELE 382 Query: 421 AGIKQPFSNT 430 + Sbjct: 383 LHRQHGGCGR 392 >UniRef50_Q6AIR8 Related to propanediol utilization protein (PduS) n=2 Tax=Desulfotalea psychrophila RepID=Q6AIR8_DESPS Length = 447 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 73/385 (18%), Positives = 125/385 (32%), Gaps = 66/385 (17%) Query: 45 LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLL 104 ++ D ++ + DAG+ G GGAGF +K+ + ++ N E EP + D+ + Sbjct: 3 MNKDSLLRSILDAGIVGEGGAGFPAHVKY-------DTQVDTVIANGCECEPLLHTDQHI 55 Query: 105 MEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTG 164 M +V M A RG I ++ +Y E A I Sbjct: 56 MRTRAADIVVAMQAIVSVTGATRGVIGIKRKYTEIAKIFADCIE---------------- 99 Query: 165 FDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCN 224 L + Y G+E L+ + G+ P P V NV TL Sbjct: 100 -GTGLELVQLDNFYPAGDEQTLVYEVTGKTIPPLGLPK--------DVGAVVANVGTLAG 150 Query: 225 VPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDG 284 V + K K++ +G V +P + +P GT E L G Sbjct: 151 VADAM-----------KGTPVTHKIVTVTGNVGSPAVIRVPLGTKLSECLAHCGGATIAD 199 Query: 285 LKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEE 344 + GG + ++ E T + + + ++ + Sbjct: 200 ---PVYILGGPMMGRMVDS-------AEEFAAKVVTKTTGGLIILPRGHYLHTMASRDLQ 249 Query: 345 FFARE---SCGWCTPCRDGLPWSVKILR----ALERGEGQPGDIETLEQLCRFLGPGKTF 397 R+ +C C C + P + + R G GD+ L + L Sbjct: 250 SMQRQAATACIQCRLCTELCPRYLIGQDFQTHKVMRAFGGGGDVA-LGAMQAALCCECGV 308 Query: 398 CA-HAPG---AVEPLQSAIK-YFRE 417 C + + + +A+K FRE Sbjct: 309 CELFSCPMGLSPRRINAALKARFRE 333 >UniRef50_D2S0T7 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=2 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2S0T7_9EURY Length = 507 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 90/433 (20%), Positives = 158/433 (36%), Gaps = 40/433 (9%) Query: 6 RTPETHPLT-WRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGG 64 PET PL R W++ + T V+ A +GRG Sbjct: 106 PVPETGPLAAGRRLVLGPCGWVNPLDPAD----YTLCSTERDASVAVDMGILA--RGRGD 159 Query: 65 A--GFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFA 122 A W + + + ++ NA+E + DR L+ P +++G+ A Sbjct: 160 AIADEPAIDAWERARETDGDPL--IVVNANEPDDRQQADRTLLAGAPIAVLDGVAAVAEY 217 Query: 123 LKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGE 182 + A ++L ++R+A + + +++ + Y G Sbjct: 218 VGAEDAVVYLNEHETTLQRHVRQAANAIEDELPVVPDVVVGPDE-----------YRAGA 266 Query: 183 ETALINSLEG-RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISK 241 TA + ++EG R PR +PP PA G +G+PT V+ T V + + Sbjct: 267 PTAALEAMEGADRIEPRLQPPTPAEYGLYGRPTIVHTPRTFAQVRQAVHAPESIDAD--- 323 Query: 242 SKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLT 301 + D GT+L+ +G V+ P + EL T L+ + K GG F T Sbjct: 324 APDPGTRLVTVTGDVETPAIVELDSSATLETTLDA----VSMEGSLKMACVGGVFGGFTT 379 Query: 302 EAHLDLPMEFESIGKAGSRLGT-ALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDG 360 L + S+ A LGT + + V+ +F + + G C P R+G Sbjct: 380 --DLGVAPTARSLTAAD--LGTDGVVELLSDRRCAVATAGERAQFASEANSGRCVPGREG 435 Query: 361 LPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFE 420 ++LR + G + + + +L R + + C A P+ +A+ F EF Sbjct: 436 TKQLTELLRDVYAGAFRS---DGIRELGRVMAR-SSNCQIGAHAPRPVTTAMDEFESEFR 491 Query: 421 AGIKQPFSNTHLI 433 A + Sbjct: 492 AH-ANGRCPSGTC 503 >UniRef50_C8XFQ0 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XFQ0_NAKMY Length = 426 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 94/399 (23%), Positives = 154/399 (38%), Gaps = 27/399 (6%) Query: 41 ALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESM--NIRYLLCNADEMEPGT 98 AL S E+ V AGL+GRGGAGF T K + + ++ N E +P Sbjct: 38 ALPHRSATELAAMVDAAGLQGRGGAGFPTARKIAAVAAAVGKTRRPAVVVANCCEGDPTA 97 Query: 99 YKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGK 158 KDR+L+++ PHL+++G + +A A++A R + + A L A+ E Sbjct: 98 AKDRVLIDRSPHLVIDGAVAAARAVRADRVVLAVHHGSP-ARQTLAVALTERP------- 149 Query: 159 NIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNN 218 + V RY+ E TAL+ L+ A P + P G G+PT V+N Sbjct: 150 -----DERVRIEVVAVPARYLASEATALLRFLDTGDARPAGRLPI-WEKGVEGRPTLVDN 203 Query: 219 VETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYA 278 ET ++ I G W+ + + GT L+ G V PG+ E+P G + R++L A Sbjct: 204 AETFAHLALIARFGAGWFGAVGHPAEPGTMLLTLGGAVPRPGVIEVPTGASVRDVL-ACA 262 Query: 279 GGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSL 338 G G G + + + + + G G + ++ Sbjct: 263 GSRPTGWALIGGLAGRWMNL---DRSAGIGLSTPELKEIGMTRGVGSLTVLPPGACLLQE 319 Query: 339 VRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRF--LGPGKT 396 + A+ C PC G A + GD + L +L R + G+ Sbjct: 320 TTRIVTHQAQAGARQCGPCMFG-----LPAIAADLAALAAGDHDALARLHRRLPVIDGRG 374 Query: 397 FCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLING 435 C H G V SA+ + +++ + Sbjct: 375 ACGHPDGTVALTASALGSMNADEPGHLQRHLAGVPCRAS 413 >UniRef50_B7CAH2 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAH2_9FIRM Length = 436 Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats. Identities = 68/378 (17%), Positives = 124/378 (32%), Gaps = 70/378 (18%) Query: 41 ALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYK 100 + +E V+ VK+AG+ G GGAGF T +K+ + + Y+L NA E EP Sbjct: 121 DWQSATREECVDFVKNAGIVGLGGAGFPTYVKYM-----KPDGVDYVLINAVECEPYITA 175 Query: 101 DRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNI 160 D + LV G I +A YI ++ + + ++ A+ +A Sbjct: 176 DYRSVMDDAQDLVTGAKIMKKMAEAKTVYICIKESHPDLIEKVKSALQDAAG-------- 227 Query: 161 MGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVE 220 + V+ Y G E L+ + + PA +GA + N Sbjct: 228 --------VEVYPVPDVYPMGWERVLVREVLHKEY-----GGLPAEAGA-----IIGNAS 269 Query: 221 TLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAG 279 + + G K + SG VK+P +P G EI+E G Sbjct: 270 SAIAIAKAFEKGEAI----------TQKNLTVSGECVKDPHNVCVPVGMPVSEIIEACGG 319 Query: 280 GMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLV 339 +D ++ GG VD +N ++++ Sbjct: 320 YTQDTVRL---ISGGPMMGKT---------------------IVNDMFVVDRAMNALTVL 355 Query: 340 RNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCA 399 +C C C D P ++ +R + D++ + + C Sbjct: 356 P--AANDDAIACLRCGKCSDHCPSGLQPVRITAALKA--NDVDEMSKRGVMSCIECGMCT 411 Query: 400 HAPGAVEPLQSAIKYFRE 417 + + + ++ + Sbjct: 412 YICPSHIDVTENVRKAKR 429 >UniRef50_D2S0Q1 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding protein n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2S0Q1_9EURY Length = 495 Score = 211 bits (536), Expect = 6e-53, Method: Composition-based stats. Identities = 90/424 (21%), Positives = 151/424 (35%), Gaps = 52/424 (12%) Query: 14 TWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAG--FSTGL 71 ++P + ++++ G+ + + ++N +G S Sbjct: 114 VLGACGWRRPTSVADHKAAGGFAPS-------DAETVLNVGSSLNGRGWEDLCQDDSLAE 166 Query: 72 KWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIF 131 W + + ++ N G+ D LL+ P +++G + A + A R ++ Sbjct: 167 TWRTARATDGDPV--VVVNGH----GSPADTLLLSSAPFEVLDGASVLANTVAADRIVVY 220 Query: 132 LRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLE 191 E A A+ + + V TG Y E T I ++E Sbjct: 221 ASSEDDTAVKTASSAVDTYPDPAA------------PMEVVTGPKEYRAAEPTMAIEAIE 268 Query: 192 G-RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLM 250 G R R +PP P G G+PT V+ TL ++ L G+E T++M Sbjct: 269 GNHRLEARLRPPGPERLGLDGRPTLVHTPRTLAHLAVGLREGIEE----------QTRVM 318 Query: 251 GFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPME 310 G V EL E++ FKA GG LD+ + Sbjct: 319 TVRGDVDAVATVELSETRKLSELVNTVGV----DGSFKAACVGGRFGGIT--RDLDVEIG 372 Query: 311 FESIGKAGSRLGTALAM-AVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILR 369 E++ A LGT + + +V V F A E+CG C PCR+G +LR Sbjct: 373 LEALDNAD--LGTDGIVDVLSDAQCLVEFVGQRASFAAEENCGRCVPCREGTAQLTLLLR 430 Query: 370 ALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSN 429 + G+ I+ L ++ + CA A P ++AI+ F EFEA + Sbjct: 431 NVYDGDFDAQAIDELGRVM----ASSSICAFGERAGRPARTAIEAFTSEFEAH-AEGRCP 485 Query: 430 THLI 433 Sbjct: 486 AGTC 489 >UniRef50_C2MC01 Electron transport complex protein RnfC n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MC01_9PORP Length = 412 Score = 210 bits (535), Expect = 8e-53, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 100/257 (38%), Gaps = 34/257 (13%) Query: 43 TGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDR 102 T L +I++++ + G+ G GGA F T +K S P + Y++ NA E EP D Sbjct: 119 TDLDAKQIIDRIAEMGIVGMGGATFPTHVKLSPPP---GQSADYVIINAVECEPYLTSDD 175 Query: 103 LLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMG 162 LM ++ G I A A R I + +A +R A A E G++ Sbjct: 176 ALMRVKAMEIMVGCAIIMKAANAPRTLIGIEVNKPDAIRIMRDAAERAKEFLPEGQS--- 232 Query: 163 TGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETL 222 + V RY G E LI++L ++ + + V NV T Sbjct: 233 ------ISVVPLKKRYPQGGEKQLIDALIRKQVA--------SGALPISTGAIVQNVGTT 278 Query: 223 CNVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGM 281 + Y+ + K K +++ +GR + +P ++ GT+ + +++ G Sbjct: 279 FAI----------YEAVMKHKPLIERIITVTGRAIMHPSNFKARIGTSMQTLIDAAGGYA 328 Query: 282 RDGLKFKAWQPGGAGTD 298 + K GG Sbjct: 329 EEPGK---IIGGGPMIG 342 >UniRef50_Q89AW8 Electron transport complex protein rnfC n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=RNFC_BUCBP Length = 505 Score = 209 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 66/403 (16%), Positives = 121/403 (30%), Gaps = 71/403 (17%) Query: 18 RDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMP 77 D + +W+ T S +++N + +G+ G G+GFST K Sbjct: 124 ESDGRDLWI--------SRTPICNYTQFSSKKLINLIYHSGILGLSGSGFSTSKKLQCAV 175 Query: 78 KDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYI 137 + L+ NA E EP D L++ +++G I + LK + I + E I Sbjct: 176 G----KVHTLVVNAVESEPCVTSDDCLIQNFSKEIIDGCKILIWILKIKKILIVVSEEKI 231 Query: 138 EAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANP 197 A L++++ + + +Y G LI L + Sbjct: 232 IAFNVLKKSVINLK----------------DFELLKVKNKYPSGSSKKLIQILFNKEI-- 273 Query: 198 RSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVK 257 P A + NV T+ + + +G +++ G Sbjct: 274 ------PQGKHAIDLGIIMYNVATVFAIKKAILDGEPL----------TERVITLYGDKF 317 Query: 258 NP-GLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGK 316 P + GT +++ Y + K GG T L F + Sbjct: 318 LPSKNVLVRIGTPISHLMKIY----KLNEKTLKVNIGGPITGLLIRN-----FNFSVLKT 368 Query: 317 AGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEG 376 + VS+ N F ++C C C P +L Sbjct: 369 NNCIM-------------FVSIQNNELNNFEEKNCIRCAACSYSCPM--NLLPEQLYWYS 413 Query: 377 QPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEF 419 + + E + C + PL S + +++ Sbjct: 414 KHSNHEKTQIYNIQDCIECGICEQVCPSDIPLMSYYRREKKQI 456 >UniRef50_A6LZW7 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LZW7_CLOB8 Length = 414 Score = 209 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 81/343 (23%), Positives = 131/343 (38%), Gaps = 59/343 (17%) Query: 102 RLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIM 161 R L+EQ +++G+ I L + I+L Y N Sbjct: 45 RYLLEQHISKVIDGIKICQKELGIEKVKIYLSECY---------------------SNFK 83 Query: 162 GTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVET 221 +E+ V G + A + + T V+N ET Sbjct: 84 MQLESYEIEVVLV------GNKKA-------------------FEKDVFNEVTLVHNAET 118 Query: 222 LCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGM 281 + + L K++ +G VKN G++E+PFGT+ REI+ +Y GG Sbjct: 119 MYALKNSLE-----------ENYIPKKIISIAGDVKNSGIYEIPFGTSLREIISEYGGGT 167 Query: 282 RDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRN 341 K Q GG TE LD P + ++ G+ L + + ++ +V+ V Sbjct: 168 ESEKAIKFVQVGGNTGAVFTEEELDTPFLYSNLIGNGTMLEVSKIEVYNVDMCVVNWVTQ 227 Query: 342 LEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHA 401 ++E+CG C CR+G+ KI++ G+G+ DI QL + G T C Sbjct: 228 KMLDNSKETCGKCVYCREGIYQLYKIIKDATEGKGKESDINLALQLSETIKIG-TLCDFG 286 Query: 402 PGAVEPLQSAIKYFREEFEAGIKQPFSNTHLINGIQ-PNLLKE 443 A PL +AI FR+EFE I + +T + + Sbjct: 287 RTASNPLYTAINKFRDEFEKHIDRKICSTLNCIAYANYFIDPK 329 >UniRef50_C6PYB3 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PYB3_9CLOT Length = 449 Score = 207 bits (528), Expect = 5e-52, Method: Composition-based stats. Identities = 69/391 (17%), Positives = 123/391 (31%), Gaps = 81/391 (20%) Query: 67 FSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAY 126 F T K + + Y + N E EP D+ +M +V+ ++A Sbjct: 20 FPTDKKLNC-------KVEYFIINGLECEPLLQSDKYIMRNKSDEIVKAAEEIGKLVEAS 72 Query: 127 RGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETAL 186 I L+ EY + L+++I + + + ++ Y G+E L Sbjct: 73 NIVIGLKKEYEKEIEALKKSIDKL---------------NSNITLYLSDVFYPAGDEQIL 117 Query: 187 INSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAG 246 + + GR P P V+NV T+ N+ + K Sbjct: 118 VYEVTGRTIPPAGIP--------LNVGAVVSNVSTVFNIYEAME-----------DKPVM 158 Query: 247 TKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLD 306 K + G V P + ++P GT E +E G D A GG Sbjct: 159 YKYVTVIGEVGTPSIIKVPIGTPVLECIESCGGAKLDDY---AVIMGGPMMG-------- 207 Query: 307 LPMEFESIGKAGSRLGTALAMAVDHEINMV---SLVRNLEEFFARESCGWCTPCRDGLPW 363 + + + + + E + + + A+ +C C C D P Sbjct: 208 KRVLKKDLESRFITKTDGAIIVLSSEHYLFNREKITIEHMKKQAKSACIQCHYCTDMCPR 267 Query: 364 SV--------KILRALERGEGQPGDIETLEQLCRFLGPGKTFCA-HAPGAVEPLQSAIKY 414 ++ KI+R + G D E L++ + C +A + Y Sbjct: 268 NLIGHPMHPHKIMRNVAFG---VEDEEALKE--TLICCECGVCEMYACPMGLSPKRINVY 322 Query: 415 FREEFEAGIKQPFSNTHLINGIQPNLLKERW 445 F+ E GI+ K+R+ Sbjct: 323 FKNELR------------KKGIKWVNDKKRF 341 >UniRef50_Q0PIB6 Ethanolamine utilization Fe-S center protein eut n=1 Tax=Heliobacillus mobilis RepID=Q0PIB6_HELMO Length = 444 Score = 207 bits (528), Expect = 5e-52, Method: Composition-based stats. Identities = 87/396 (21%), Positives = 146/396 (36%), Gaps = 70/396 (17%) Query: 47 PDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLME 106 ++IV VK+AG+ G GGAGF T +K + + ++ N E EP + LM Sbjct: 2 REKIVKAVKEAGVVGAGGAGFPTHIKMNA-------SADIIIANGAECEPLLRSHQHLMA 54 Query: 107 QLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFD 166 +V G++ A A + YI L+ +Y A L ++I + Sbjct: 55 AESDRVVLGLIAVMLATGAQKSYIGLKKKYSVAIEALEQSIERHAKG------------- 101 Query: 167 FELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVP 226 + + Y G+E L+ + G+ P V NVETL N+ Sbjct: 102 -RVELFILPDFYPAGDEQVLVYEVTGKII--------PEGGIPLHVGVVVINVETLVNIT 152 Query: 227 AILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLK 286 L TK + +G V+ P ++P G R ++E G + + Sbjct: 153 KAL-----------DGVPVMTKYVTVTGAVRQPVTLKVPIGIPIRLLIEAAGGAIVNDY- 200 Query: 287 FKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVS---LVRNLE 343 A GG + +D P+ T + + + ++++ L + Sbjct: 201 --ALIDGGPMMGRIV--EVDSPVTKT----------TGGIIVLPKDHSLIAGKTLPWSAI 246 Query: 344 EFFARESCGWCTPCRDGLPWSV--------KILRALERGEGQPGDIETLEQLCRFLGPGK 395 ++ C C C D P + +I++A+ G GD T LC G Sbjct: 247 ANRSKSVCCACRACTDCCPRHLLGHSLEPHRIMQAIGNGTSYQGDAITRAFLCSECGACD 306 Query: 396 TF-CAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNT 430 TF C+ P + ++ R+ AGIK P+ N Sbjct: 307 TFGCSMGLS---PRRVNMELKRQLSAAGIKNPYHNQ 339 >UniRef50_A9KN64 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=8 Tax=Bacteria RepID=A9KN64_CLOPH Length = 442 Score = 205 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 72/378 (19%), Positives = 121/378 (32%), Gaps = 64/378 (16%) Query: 48 DEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQ 107 +E+ VK+ G+ G GGAGF T K+S + ++ N E EP R L+ Sbjct: 5 EELSQIVKEYGICGAGGAGFPTYAKFS-------NKVDTIILNCAECEPLLKLHRQLLRD 57 Query: 108 LPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDF 167 + +++ I A ++ A I ++ Y + I Sbjct: 58 RAYEVLKAFSIIAESIGAKEAIIVVKPSYKNTIAAVEAEIGAYK---------------- 101 Query: 168 ELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPA 227 + + Y G+E LI GR P P V NVET+ NV Sbjct: 102 NMSLKLCKEVYPAGDEVVLIYEATGRVVKPGGLP--------VDIGVAVFNVETVYNV-- 151 Query: 228 ILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKF 287 Y+ + + +KL+ G VK P +P G T +E++E G K Sbjct: 152 --------YEAVINHRPVTSKLVSVVGEVKEPKTVRVPLGMTVKEVVEMVGGITT---KE 200 Query: 288 KAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMV---SLVRNLEE 344 A+ GG + + + + + + ++ +++ Sbjct: 201 PAYLMGGPMMGSVESEQHLI------------TKTSNAIIVLPKDHYVIIRKESKPSIDL 248 Query: 345 FFARESCGWCTPCRDGLPWSVKILR----ALERGEGQPGDIETLEQLCRFLGPGKTFCA- 399 A SC C C D P + R L C+ Sbjct: 249 KRAAASCCHCEMCTDLCPRHLLGHPSNPHLFMRAATCKDVQNPQIFLDTMYCCSCGLCSM 308 Query: 400 HAPGAVEPLQSAIKYFRE 417 +A G S I +++ Sbjct: 309 YACGQGLSPASLITLYKQ 326 >UniRef50_A5N6H2 RnfC related NADH dehydrogenase n=2 Tax=Clostridium kluyveri RepID=A5N6H2_CLOK5 Length = 442 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 72/380 (18%), Positives = 124/380 (32%), Gaps = 72/380 (18%) Query: 49 EIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQL 108 +++ +VKDAG+ G GGAGF T +K + ++Y + NA E EP D+ LM Sbjct: 2 DLLKKVKDAGIIGAGGAGFPTHVKLN-------TKVKYFIVNALECEPLLQSDKYLMRNH 54 Query: 109 PHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFE 168 +V I +L A + I L+ Y L +I + + Sbjct: 55 SDEIVGATEIIGKSLGAEKIVIGLKNVYYNEIDALTNSIKKL---------------NSS 99 Query: 169 LFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAI 228 + + Y G+E L+ + G+ P + P V+NV T+ NV Sbjct: 100 VELFLNRSFYPAGDEQILVYEVTGKTIAPGAIPST--------VGAVVSNVGTVFNVFEA 151 Query: 229 LANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFK 288 L K + K + G V +P + ++P GT E +E G Sbjct: 152 L-----------KDEPVTYKYVTVVGEVASPAIVKVPIGTKVTECIEKCGGATLGDY--- 197 Query: 289 AWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVS---LVRNLEEF 345 GG + E + + + + + L Sbjct: 198 VVIMGGPMMG--------KKISKEEAENTVITKTNGGIIVIPKDHYVAARERLTIEEMVH 249 Query: 346 FARESCGWCTPCRDGLPWS--------VKILRALERGEGQPGDIETLEQLCRFLGPGKTF 397 A+ +C C C + P KI+R + G ++ + Sbjct: 250 RAKAACEQCRYCTELCPRYQIGHPLHPHKIMRTMALGRNDEEVLKEA-----IMCCQCGV 304 Query: 398 CA-HAPG---AVEPLQSAIK 413 C +A + + +K Sbjct: 305 CEMYACPNGLSPRRINGYVK 324 >UniRef50_C6LEW4 PduS protein n=3 Tax=Bacteria RepID=C6LEW4_9FIRM Length = 449 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 73/378 (19%), Positives = 117/378 (30%), Gaps = 66/378 (17%) Query: 67 FSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAY 126 F T +K + + Y + NA E EP D+ L +V + + A L A Sbjct: 20 FPTHVKLN-------TKVEYFIVNAAECEPLIETDKYLCRTWAERIVRTIPVIADFLGAS 72 Query: 127 RGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETAL 186 + I L+ +Y L++A+ ++ + Y G+E L Sbjct: 73 KKVIALKAKYEREIAALKQAVETC---------------GSDVEIFGLGYFYPAGDEQTL 117 Query: 187 INSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAG 246 I + GR R P V+NV T+ N+ L K Sbjct: 118 IQQVTGRSVPERGLPS--------DVGCVVDNVGTVLNIADALE-----------GKPVT 158 Query: 247 TKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLD 306 K + G V+ L +P GT E +++ + D A GG Sbjct: 159 EKYLSVVGEVRQTLLLRVPVGTPVLECVKEAQPLISDY----ALIMGGPMMG-------K 207 Query: 307 LPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARE---SCGWCTPCRDGLPW 363 E ++ A T M + E + E R+ +C C C D P Sbjct: 208 QLTERTAMEAAVVTKTTGNIMVLPKEHYLFKRAALPMETIKRQTRSACIQCRMCTDLCPR 267 Query: 364 SV--------KILRALERGEGQPGDIETLEQLCR-FLGPGKTFCA-HAPGAVEPLQSAIK 413 + ++R L R E D E L+ C A + + Sbjct: 268 YLIGHQMRPNLVMRNLWREETAKDDEEFLKMFGDAANCCSCGVCEMFACPMGLSPRKVNE 327 Query: 414 YFREEFEAG-IKQPFSNT 430 Y + E I+ P + Sbjct: 328 YMKGELRKRGIQVPKNPE 345 >UniRef50_P57215 Electron transport complex protein rnfC n=3 Tax=Buchnera aphidicola (Acyrthosiphon pisum) RepID=RNFC_BUCAI Length = 473 Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 67/432 (15%), Positives = 134/432 (31%), Gaps = 73/432 (16%) Query: 16 RLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSL 75 ++ P +LD++ N K +P++++ + +G+ G GG F + K Sbjct: 65 NIKIVISPDYLDQWIRLN----PIKDYKKYAPEKLIKIIHQSGVVGLGGGQFPSSKKIIF 120 Query: 76 MPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGE 135 L+ NA E EP D L+ ++ G I + K I ++ + Sbjct: 121 SIN----RAHTLIVNAVESEPYITSDNCLIYNHISEILIGCKIICWITKIKTVLIAIQED 176 Query: 136 YIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRA 195 I++ ++ I + + +Y G L+ SL G+ Sbjct: 177 NIQSISKIQHLIKNKSL----------------FKICIIKKKYPAGSSKVLVKSLTGKEV 220 Query: 196 NPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGR 255 P + + NV T+ ++ + NG K +++ Sbjct: 221 --------PHGKHSIDIGYLIFNVATIFSIKRAIING----------KPLTERVVTLMSD 262 Query: 256 VKN-PGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESI 314 G + + GT + L + LK G F+ + + + + Sbjct: 263 KNLLSGNFWVRIGTPIKYFL------TSNKLKQSFIASVYLGGPFMGKKINN--LNHSIL 314 Query: 315 GKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERG 374 K S T + E + ++C C C P V +L Sbjct: 315 KKTNSIFIT--------------HKKEKNESISEKTCIRCGYCSYVCP--VNLLPQQLYW 358 Query: 375 EGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREE--FEAGIKQPFSNTHL 432 + + ++ C + PL +KYF +E I + + Sbjct: 359 YIKNKNHVQTKKHYVLDCIECKACEKVCPSYIPL---VKYFIQEKNILKNITLENNRKKM 415 Query: 433 INGIQPNLLKER 444 + I+ ++R Sbjct: 416 -SLIRFKTREQR 426 >UniRef50_A6TUS7 Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit n=9 Tax=Clostridiales RepID=A6TUS7_ALKMQ Length = 445 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 59/365 (16%), Positives = 112/365 (30%), Gaps = 64/365 (17%) Query: 67 FSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAY 126 F T +K ++L N E EP D+ LME P +++G+ + +K Sbjct: 20 FPTHVKLDA-------KAEFVLLNGAECEPLLRVDQQLMEYFPEEVIKGLEKARQHVKGK 72 Query: 127 RGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETAL 186 + I ++ ++ + L R I E + + + A Y G+E L Sbjct: 73 KALIGIKEKHTKVIDKLERKIKELQ-------------VESTVEIKKMADVYPAGDEQVL 119 Query: 187 INSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAG 246 + L GR P V N ET N+ + Sbjct: 120 VYELTGRVVPEAGIP--------IHVGCVVINSETALNIHRAINQ-----------DPVT 160 Query: 247 TKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLD 306 + SG V NP ++P G + L+ + + GG + E+ Sbjct: 161 HSYITVSGDVPNPLTAKVPVGMKIIDALKLTG---INDFQNHRVIDGGPMMGRVLES--- 214 Query: 307 LPMEFESIGKAGSRLGTALAMAVDHEINMVS---LVRNLEEFFARESCGWCTPCRDGLPW 363 + + + + + ++ + R +C C C D P Sbjct: 215 --------LEGSVTKKSKGYIVLHKDHYLIKKKTVTWKQSRRINRSACEQCRLCTDLCPR 266 Query: 364 SV-----KILRALERGEGQPGDIETLEQLCRFLGPGKTFCA-HAPGAVEPLQSAIKYFRE 417 + + + + ++ L+++ L C A + Q +F+E Sbjct: 267 FLIGHSIQPHKIMNASNYLTPNMNHLKRV--QLCCQCNLCELFACKSGLYPQRNNTFFKE 324 Query: 418 EFEAG 422 E Sbjct: 325 ELAEH 329 >UniRef50_C3X8F4 RnfC protein n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3X8F4_OXAFO Length = 426 Score = 198 bits (503), Expect = 4e-49, Method: Composition-based stats. Identities = 74/370 (20%), Positives = 126/370 (34%), Gaps = 66/370 (17%) Query: 44 GLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRL 103 P+ I+ ++ AG+ G GGA F LK+ L +I+ + N E EP D Sbjct: 109 DPPPEAILQAIEAAGIVGAGGAQFPAALKYRLA----GEDIKTFIVNGVECEPYLTADYA 164 Query: 104 LMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGT 163 +M + EG+ + L+A I + + E + + AG Sbjct: 165 VMRERTQAFFEGIRLVNTLLRAKEVVIAIEEKNRELEAVFAPFLTQPRYAGF-------- 216 Query: 164 GFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLC 223 V +G Y G + L+ ++ G P A G+ V+NV T+ Sbjct: 217 ------RVKVVSGGYPQGSQWQLVCAVTGLELAPP--------RHAAGEGIVVSNVATVY 262 Query: 224 NVPAILANGVEWYQNISKSKDAGTKLMGFSGR-VKNPGLWELPFGTTAREILEDYAGGMR 282 YQ + + + ++++ SG V +PG E+P GT +LE Sbjct: 263 A----------AYQAVVEKRPVVSRILTVSGEGVGHPGNIEVPIGTPVGYVLEQMGVSSD 312 Query: 283 DGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNL 342 GG L P+ GT + + + Sbjct: 313 RYT----IVLGGPMMGRLV-TDWSSPVTK----------GTNGVLVFERQTV-------- 349 Query: 343 EEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAP 402 RE+C C C D P + L+ E + G++ +++ L C Sbjct: 350 ----DRENCIGCGRCIDACPMRLMPLKYAEGW--RLGNLVMMKRHDLNLCVECGACESVC 403 Query: 403 GAVEPLQSAI 412 + PL ++I Sbjct: 404 PSNVPLMASI 413 >UniRef50_D1B7S1 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=2 Tax=cellular organisms RepID=D1B7S1_THEAS Length = 449 Score = 198 bits (503), Expect = 4e-49, Method: Composition-based stats. Identities = 78/366 (21%), Positives = 118/366 (32%), Gaps = 68/366 (18%) Query: 48 DEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQ 107 +++V+ V+DAG+ G GGAGF T +K +L N E EP D+ LM Sbjct: 2 EDLVSAVRDAGVVGAGGAGFPTHVKL-------GGGCESVLVNGAECEPLLEVDQQLMAL 54 Query: 108 LPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDF 167 P ++E + +L A G I ++ +Y EA L I G Sbjct: 55 YPSRVLEALDAVVRSLGAREGIIGIKDKYREALEALGGEI----------------GGFP 98 Query: 168 ELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPA 227 L +H Y G+E L+ GR P V NVETL N+ Sbjct: 99 SLRLHVLPNVYPAGDEQVLVYEATGRIV--------PEGGIPLEVGVVVLNVETLLNIWG 150 Query: 228 ILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKF 287 + K + G V P +P G + E++ G Sbjct: 151 AMR-----------GIPVTEKYLTVCGEVHRPATVRVPLGVSFGEVVAAVGGSPLKDF-- 197 Query: 288 KAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEE--- 344 GG + +D P+ T + + + +V Sbjct: 198 -VVIDGGPMMGRVVRR-MDEPVTKT----------TKGLIVLPPDHPLVVAKERDMRSMM 245 Query: 345 FFARESCGWCTPCRDGLPWSV--------KILRALERGEGQPGDIETLE-QLCRFLGPGK 395 A+ +C C C D P + K++R + GD E LC G + Sbjct: 246 SLAKTACCHCMLCTDLCPRYLLGHRLRPDKLMRLAAYNDTCEGDAAATEAFLCCECGMCE 305 Query: 396 TFCAHA 401 C Sbjct: 306 VACVMG 311 >UniRef50_C0R1F3 DH dehydrogenase n=3 Tax=Brachyspira RepID=C0R1F3_BRAHW Length = 387 Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats. Identities = 66/354 (18%), Positives = 140/354 (39%), Gaps = 29/354 (8%) Query: 73 WSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFL 132 + D ++ ++L NA + +KD+ L+ PHL+++G + A L R I L Sbjct: 54 IYQLLIDGNIKEDFILINAASFDYLVFKDKFLLRNNPHLILDGSVFIAKILNIKRIDIVL 113 Query: 133 RGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEG 192 + Y+E + ++I EA +A + +D E+ ++ Y Sbjct: 114 KDYYLEERDIILKSIVEAEDANFV--------YDIEINIYDEYAYY-------------- 151 Query: 193 RRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGF 252 + N R P F + ++ET+ + + G +++ + G+ ++ Sbjct: 152 NKYNIRITPSFLENKKY------IFDLETISQIAYLAHIGGFTFKDYGNGEYKGSNILSI 205 Query: 253 SGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFE 312 +G + NP L+E T R I++ G +++ + G E + +++E Sbjct: 206 TGDIINPNLYEFEMHTPLRNIVKAAGGTVKEYTIKCVFTNGFLNPPIDFETFQKMTLDYE 265 Query: 313 SIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALE 372 ++G + + ++ +V + +F SCG C+PC +G + + Sbjct: 266 CFDSLNMKIGNGGICFIQEDRCIIRVVVKIIQFGKSISCGKCSPCHNGFDLCEYYINRML 325 Query: 373 RGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQP 426 G D L++ + G + C + + S ++ FR+EF I+ Sbjct: 326 LGNSNFDDYSNLKEAVEMIKIGAS-CLYIRSLANCILSTMEMFRDEFVYLIENK 378 >UniRef50_D1AJ84 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AJ84_SEBTE Length = 444 Score = 197 bits (500), Expect = 9e-49, Method: Composition-based stats. Identities = 74/367 (20%), Positives = 121/367 (32%), Gaps = 69/367 (18%) Query: 67 FSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAY 126 F T LK + + + N E EP D+ LM + + L++GM I A LKA Sbjct: 20 FPTHLKMT-------KEVGTFIVNGAECEPLLEVDKFLMREKTYELIKGMEIIAGNLKAA 72 Query: 127 RGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETAL 186 R + L+ +Y L I E D + + Y G+E + Sbjct: 73 RVVLGLKKKYKVEIKKLSETIKEL---------------DSNVELFLMDNFYPAGDEQIM 117 Query: 187 INSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAG 246 + + G+ PA T V+NV T+ NV + K Sbjct: 118 VKDITGK--------SIPAGGIPLDVDTVVSNVGTVINVYEAIE-----------EKPVT 158 Query: 247 TKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLD 306 K + G V NP + E+P GT+ E ++ G A GG + Sbjct: 159 KKYVSVLGEVNNPVMLEVPIGTSFEECIKRAGGVKIKNY---AVIEGGPMMGKI------ 209 Query: 307 LPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARES---CGWCTPCRDGLPW 363 + + + + T + + + ++ E ES C C C D P Sbjct: 210 --VHRDELAEKAVIKTTGALIILPEDHYVIKRKERPEAHILNESRAACIQCRMCTDMCPR 267 Query: 364 SV--------KILRALERGEGQPGDIETLEQLCRFLGPGKTFCA-HAPGAVEPLQSAIKY 414 + +++RA+ G D E L++ + C A +S Y Sbjct: 268 YLIGHKLRPHRVMRAMGMG---EQDEEILKE--ALICCECNVCELFACPMGISPKSTNTY 322 Query: 415 FREEFEA 421 + F Sbjct: 323 LKGVFRE 329 >UniRef50_C4LFE2 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=63 Tax=Gammaproteobacteria RepID=C4LFE2_TOLAT Length = 459 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 80/390 (20%), Positives = 129/390 (33%), Gaps = 68/390 (17%) Query: 36 EGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEME 95 + R L L + + +V+ AG+ G GGAGF +K L NA E E Sbjct: 11 QQIRAVLQSLDLNTLPEKVRQAGIVGAGGAGFPAYVKLQA-------KAEIYLVNAAECE 63 Query: 96 PGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGL 155 P D+ LM Q L+ G+ A A G I L+ +Y A L + E Sbjct: 64 PMLKVDQQLMTQHASQLIRGLRYGMAATGAREGIIALKAKYQPAIAALEPLLPE------ 117 Query: 156 LGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTC 215 + +H Y G+E I GRR P + P Sbjct: 118 ------------NVRIHILPDVYPAGDEVITIWQATGRRVPPAALP--------ISIGVV 157 Query: 216 VNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILE 275 VNNV+TL N+ A L + + +G V+NP +P G T R++L Sbjct: 158 VNNVQTLLNLAAALE----------TETPVTHRTLTINGAVRNPMTVTVPLGVTLRDVLT 207 Query: 276 DYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINM 335 G A+ GG L LD P+ T + + + + Sbjct: 208 LAGGATIPD---PAFINGGPMMGKLV-TDLDAPVTKT----------TGGLLVLPEDHLI 253 Query: 336 VSLVRNLEE---FFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQ----LC 388 + + ++ A+ C C C + P + + + + + L Sbjct: 254 IQRRKRSDDAILNMAKTVCEQCGLCTELCPRHIIGHELPPHLLVRAMNYQQVATPSILLS 313 Query: 389 RFLGPGKTFC-AHAPG---AVEPLQSAIKY 414 + C ++A + + +K Sbjct: 314 ALTCSECSVCESYACPVEISPMRINQLLKK 343 >UniRef50_A0AHN6 Complete genome n=18 Tax=Listeria RepID=A0AHN6_LISW6 Length = 454 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 80/415 (19%), Positives = 131/415 (31%), Gaps = 79/415 (19%) Query: 45 LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLL 104 +S I+ ++KDAG+ G GGAGF T K+S + YL+ NA E EP D + Sbjct: 1 MSQMSILEKIKDAGVVGCGGAGFPTHAKFS-------GEVEYLIINAAECEPLLKTDHFV 53 Query: 105 MEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTG 164 M ++ + + + A I + Y E LR AI E Sbjct: 54 MRNHAVETIKAIEMVKSQVGAEFAVIATKRYYTEEIAALRLAITEL-------------- 99 Query: 165 FDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCN 224 + + +H Y G+E ++ + GR P P V+NV T+ N Sbjct: 100 -NASVTIHEMDNVYPTGDEQVMVFEVTGRVVPPSGIP--------LMVGCIVSNVSTMWN 150 Query: 225 VPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDG 284 V + + + K + +G V P L ++P GT L G D Sbjct: 151 VYHAIQDDAPVVR----------KQLTVTGAVNEPKLLDVPIGTPFEVCLAAAGGTNLDE 200 Query: 285 LKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEE 344 + GG L + +I + T+ + + + L E Sbjct: 201 Y---LFLDGGPMMGKLN--------DQSTIAEKVVTKTTSGLIVTEDTGYLHKLHYQTVE 249 Query: 345 FFARE---SCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCR----------FL 391 E +C C+ C D P K L E + + Sbjct: 250 QIFNETKSACIQCSLCSDLCPR--KQLGHDIHPHKVMRHFAVAEDITDIKPDPIWEEAMI 307 Query: 392 GPGKTFCA-HAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLINGIQPNLLKERW 445 C A + + +K+ L G++ K+ + Sbjct: 308 CCECGICEVIACP--------MGLSPRQVNIHVKKEL----LKQGVRYQTDKKEF 350 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.311 0.140 0.394 Lambda K H 0.267 0.0431 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,588,287,337 Number of Sequences: 3077464 Number of extensions: 107592744 Number of successful extensions: 325749 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 777 Number of HSP's successfully gapped in prelim test: 291 Number of HSP's that attempted gapping in prelim test: 320901 Number of HSP's gapped (non-prelim): 1569 length of query: 445 length of database: 1,040,396,356 effective HSP length: 132 effective length of query: 313 effective length of database: 634,171,108 effective search space: 198495556804 effective search space used: 198495556804 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 95 (41.1 bits)