Phyre 2 alignment of P0A8F0 with d1klva_

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Job Description | P0A8F0
Confidence | 20.38% | Date | Wed Jan 25 15:20:18 GMT 2012
Rank | 155 | Aligned Residues | 30
% Identity | 27% | Template | d1klva_
SCOP info | beta-Grasp (ubiquitin-like) | Ubiquitin-like | GABARAP-like
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 167 | . | . | 170 | . | . | . | . | . |  | . | . | . | . | 180 | . | . | . | . | . | . |  |  |  |  | . | . | . | 190 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |
Query Sequence |  | A | A | L | E | K | A | H | P | D | . | V | E | L | Y | T | A | S | I | D | Q | G | . | . | . | . | L | N | E | H | G | Y | I | I | P | G
Query Conservation |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | E | K | I | R | K | K | Y | P | D | R | V | P | V | I | V | E | K | A | P | K | A | R | I | G | D | L | D | K | K | K | Y | L | V | P | S
Template Known Secondary structure |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  | T | T |  |  | S |  |  |  | S |  | S |  |  |  |  |  | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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