Phyre 2 alignment of P0A8F0 with c3u62A_

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Job Description | P0A8F0
Confidence | 32.11% | Date | Wed Jan 25 15:20:18 GMT 2012
Rank | 122 | Aligned Residues | 27
% Identity | 30% | Template | c3u62A_
PDB info | PDB header:oxidoreductase | Chain: A: PDB Molecule:shikimate dehydrogenase; | PDBTitle: crystal structure of shikimate dehydrogenase from thermotoga maritima
Resolution | 1.45 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 132 | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | M | L | A | T | G | G | S | V | I | A | T | I | D | L | L | K | K | A | G | C | S | S | I | K | V | L | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | V | V | G | A | G | G | A | A | R | A | V | I | Y | A | L | L | Q | M | G | V | K | D | I | W | V | V | N
Template Known Secondary structure |  |  |  |  |  | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 113 | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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