BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (135 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P06966 HTH-type transcriptional regulator dicA n=10 Tax... 275 3e-73 UniRef50_C8TRW1 Predicted phage repressor CI n=30 Tax=Enterobact... 149 3e-35 UniRef50_D2U099 Phage transcriptional regulator n=1 Tax=Arsenoph... 117 1e-25 UniRef50_D2U4L3 Phage transcriptional regulator n=1 Tax=Arsenoph... 97 1e-19 UniRef50_P69202 Repressor protein C2 n=23 Tax=root RepID=RPC2_BPP22 82 5e-15 UniRef50_D2TX49 Phage transcriptional regulator n=1 Tax=Arsenoph... 77 2e-13 UniRef50_A7JPM0 Possible LexA family repressor/S24 family protea... 75 7e-13 UniRef50_D2TVN8 Phage transcriptional regulator n=1 Tax=Arsenoph... 74 1e-12 UniRef50_C6M778 HTH-type transcriptional regulator DicA n=1 Tax=... 73 3e-12 UniRef50_Q12J32 Transciptional regulator n=10 Tax=Shewanella Rep... 72 4e-12 UniRef50_C4X6V4 Putative repressor protein of prophage n=2 Tax=E... 69 4e-11 UniRef50_D2U0V0 Phage transcriptional regulator n=1 Tax=Arsenoph... 67 2e-10 UniRef50_C7BH54 Similar to dica, regulator of dicb encoded by pr... 67 3e-10 UniRef50_B4ETH6 Putative phage repressor n=1 Tax=Proteus mirabil... 66 3e-10 UniRef50_B3IN07 Repressor protein C2 n=2 Tax=Escherichia coli Re... 66 4e-10 UniRef50_A7FIY9 Repressor protein C2 n=2 Tax=Yersinia RepID=A7FI... 65 5e-10 UniRef50_C5EI29 Predicted protein n=1 Tax=Clostridiales bacteriu... 65 7e-10 UniRef50_B5EK35 Transcriptional regulator, XRE family n=2 Tax=Ac... 60 2e-08 UniRef50_D2TX37 Phage transcriptional regulator n=1 Tax=Arsenoph... 59 3e-08 UniRef50_A1JLW6 Putative DNA-binding protein n=1 Tax=Yersinia en... 59 4e-08 UniRef50_B9Z4Y0 Transcriptional regulator, XRE family n=1 Tax=Lu... 58 8e-08 UniRef50_B5R8N7 Predicted phage regulatory protein n=9 Tax=Enter... 58 9e-08 UniRef50_A4SLB7 Phage repressor n=1 Tax=Aeromonas salmonicida su... 58 1e-07 UniRef50_Q5E364 Transcriptional repressor, Cro/CI family n=1 Tax... 57 1e-07 UniRef50_Q5DY86 DNA-binding protein RDGA n=1 Tax=Vibrio fischeri... 56 3e-07 UniRef50_Q2SPC6 SOS-response transcriptional repressors (RecA-me... 55 5e-07 UniRef50_Q5ZTV2 Hypothetical phage repressor n=1 Tax=Legionella ... 55 5e-07 UniRef50_B2TZ32 Helix-turn-helix domain protein n=4 Tax=root Rep... 55 5e-07 UniRef50_C6J5N1 Predicted protein n=1 Tax=Paenibacillus sp. oral... 55 8e-07 UniRef50_A1ACF7 Putative transcriptional regulator n=9 Tax=Enter... 54 2e-06 UniRef50_B2T1W8 Transcriptional regulator, XRE family n=1 Tax=Bu... 54 2e-06 UniRef50_A6WVE6 Putative phage repressor n=1 Tax=Ochrobactrum an... 53 3e-06 UniRef50_C6IZ53 Predicted protein n=1 Tax=Paenibacillus sp. oral... 53 4e-06 UniRef50_A2UZN6 Transcriptional regulator, XRE family n=1 Tax=Sh... 52 4e-06 UniRef50_D2U1D8 Phage transcriptional regulator n=1 Tax=Arsenoph... 52 5e-06 UniRef50_B8EFW1 Putative phage repressor n=1 Tax=Shewanella balt... 52 6e-06 UniRef50_D2MI64 Prophage repressor n=2 Tax=Candidatus Poribacter... 52 7e-06 UniRef50_Q044U1 Transcriptional regulator, xre family n=4 Tax=ro... 52 9e-06 UniRef50_C9XPP6 Putative phage regulatory protein n=5 Tax=Clostr... 51 1e-05 UniRef50_D2U1N5 Phage transcriptional regulator n=1 Tax=Arsenoph... 51 1e-05 UniRef50_A9L6K9 Putative phage repressor n=1 Tax=Shewanella balt... 51 1e-05 UniRef50_B4RHZ2 Transcriptional regulator, Cro/CI family n=2 Tax... 50 2e-05 UniRef50_D2U4K8 Phage transcriptional regulator n=1 Tax=Arsenoph... 50 2e-05 UniRef50_Q8DUT3 Putative uncharacterized protein n=3 Tax=Firmicu... 50 2e-05 UniRef50_B0SUT7 Transcriptional regulator, XRE family n=5 Tax=Al... 50 2e-05 UniRef50_B0UWI4 Putative phage repressor n=1 Tax=Haemophilus som... 50 2e-05 UniRef50_Q2JQC4 Putative DNA-binding protein n=1 Tax=Synechococc... 50 2e-05 UniRef50_Q97IR2 Predicted transcriptional regulator n=1 Tax=Clos... 50 2e-05 UniRef50_Q1YI68 Putative transcriptional regulator n=1 Tax=Auran... 50 2e-05 UniRef50_A5W7Z5 Putative phage repressor n=1 Tax=Pseudomonas put... 50 3e-05 UniRef50_Q2JNL0 Conserved domain protein n=1 Tax=Synechococcus s... 50 3e-05 UniRef50_Q6UAU6 Gp36 n=2 Tax=Siphoviridae RepID=Q6UAU6_9CAUD 50 3e-05 UniRef50_C7HWC9 Transcriptional regulator n=2 Tax=Anaerococcus R... 50 3e-05 UniRef50_A0RLU0 Transcriptional regulator n=7 Tax=Bacillus RepID... 50 3e-05 UniRef50_Q2Y8T7 Transcriptional regulator, XRE family n=1 Tax=Ni... 49 3e-05 UniRef50_B6ET56 Putative peptidase, S24-like n=1 Tax=Aliivibrio ... 49 4e-05 UniRef50_A9IYM2 Transcriptional regulator n=1 Tax=Bartonella tri... 49 4e-05 UniRef50_Q5LR46 DNA-binding protein, putative n=1 Tax=Ruegeria p... 49 4e-05 UniRef50_Q896S6 Putative transcriptional regulator n=1 Tax=Clost... 49 4e-05 UniRef50_C4ZER3 Putative uncharacterized protein n=4 Tax=Firmicu... 49 4e-05 UniRef50_B7LNL7 Repressor protein C2 n=5 Tax=Enterobacteriaceae ... 49 5e-05 UniRef50_D1PI87 Toxin-antitoxin system, antitoxin component, Xre... 49 5e-05 UniRef50_Q1NQ27 Helix-turn-helix motif n=1 Tax=delta proteobacte... 49 5e-05 UniRef50_A8VQI9 Putative transcriptional regulator, XRE family n... 49 6e-05 UniRef50_B0SWF3 Transcriptional regulator, XRE family n=2 Tax=Ca... 49 6e-05 UniRef50_C6RPZ5 Peptidase S24-like domain protein n=2 Tax=Acinet... 49 6e-05 UniRef50_B9QVC7 Bacteriophage CI repressor protein, putative n=2... 49 6e-05 UniRef50_D0Z3D3 Phage repressor n=1 Tax=Photobacterium damselae ... 49 6e-05 UniRef50_C8WMU4 Transcriptional regulator, XRE family n=1 Tax=Eg... 49 6e-05 UniRef50_C4G5J1 Putative uncharacterized protein n=1 Tax=Abiotro... 49 6e-05 UniRef50_B9WVI7 Transcriptional regulator, XRE family n=1 Tax=St... 49 7e-05 UniRef50_C6LAG2 DNA-binding protein n=1 Tax=Bryantella formatexi... 49 7e-05 UniRef50_B2N7G8 Helix-turn-helix domain protein n=1 Tax=Escheric... 49 7e-05 UniRef50_C3LHJ4 Prophage LambdaBa02, repressor protein n=12 Tax=... 49 7e-05 UniRef50_B8GUZ2 Putative uncharacterized protein n=1 Tax=Thioalk... 48 8e-05 UniRef50_A9KUS5 Transcriptional regulator, XRE family n=1 Tax=Sh... 48 8e-05 UniRef50_C6PS92 Transcriptional regulator, XRE family n=1 Tax=Cl... 48 9e-05 UniRef50_UPI000196C777 hypothetical protein CATMIT_02710 n=1 Tax... 48 9e-05 UniRef50_UPI0001AF457F putative phage repressor n=1 Tax=Pseudomo... 48 1e-04 UniRef50_Q1GFV0 Transcriptional regulator, XRE family n=8 Tax=Rh... 48 1e-04 UniRef50_A9IYN4 Transcriptional regulator n=14 Tax=Bartonella Re... 48 1e-04 UniRef50_Q2RSF5 Transcriptional regulator, XRE family n=1 Tax=Rh... 48 1e-04 UniRef50_B4TN93 Conserved domain protein n=5 Tax=Gammaproteobact... 48 1e-04 UniRef50_A8RI36 Putative uncharacterized protein n=1 Tax=Clostri... 48 1e-04 UniRef50_B0T4G6 Transcriptional regulator, XRE family n=20 Tax=c... 48 1e-04 UniRef50_A6U898 Helix-turn-helix domain protein n=3 Tax=Rhizobia... 48 1e-04 UniRef50_B6GDK8 Putative uncharacterized protein n=1 Tax=Collins... 47 1e-04 UniRef50_D0C932 Cro/CI family transcriptional regulator n=8 Tax=... 47 1e-04 UniRef50_A8SPU8 Putative uncharacterized protein n=1 Tax=Coproco... 47 2e-04 UniRef50_C6QSQ4 Transcriptional regulator, XRE family n=1 Tax=Ge... 47 2e-04 UniRef50_C2KY20 Putative uncharacterized protein n=1 Tax=Oribact... 47 2e-04 UniRef50_UPI0001C3512F putative transcriptional regulator n=1 Ta... 47 2e-04 UniRef50_A8RQA3 Putative uncharacterized protein n=1 Tax=Clostri... 47 2e-04 UniRef50_A3CPI8 Transcriptional regulator, XRE family, putative ... 47 2e-04 UniRef50_C8WL34 Transcriptional regulator, XRE family n=1 Tax=Eg... 47 2e-04 UniRef50_B6AW67 Transcriptional regulator, XRE family n=1 Tax=Rh... 47 2e-04 UniRef50_A1TUL8 Putative phage repressor n=1 Tax=Acidovorax citr... 47 2e-04 UniRef50_Q5FQ46 Putative uncharacterized protein n=1 Tax=Glucono... 47 2e-04 UniRef50_A9BRJ2 Transcriptional regulator, XRE family n=3 Tax=Co... 47 2e-04 UniRef50_C9A4E1 Predicted protein n=3 Tax=Enterococcus casselifl... 47 2e-04 UniRef50_UPI0001693962 transcriptional regulator, XRE family pro... 47 3e-04 UniRef50_B5Z300 Putative repressor protein encoded within propha... 47 3e-04 UniRef50_C9AD53 Predicted protein n=1 Tax=Enterococcus casselifl... 46 3e-04 UniRef50_Q033H7 Transcriptional regulator, xre family n=4 Tax=La... 46 3e-04 UniRef50_Q6J1N3 Putative prophage repressor protein n=1 Tax=Burk... 46 3e-04 UniRef50_A2P378 Repressor protein C2 n=1 Tax=Vibrio cholerae 158... 46 3e-04 UniRef50_B8FWP9 Transcriptional regulator, XRE family n=2 Tax=De... 46 3e-04 UniRef50_A0YEC5 Putative uncharacterized protein n=1 Tax=marine ... 46 3e-04 UniRef50_B3G141 Hypothetical bacteriophage protein n=1 Tax=Pseud... 46 3e-04 UniRef50_Q1WSI6 DNA-binding protein n=3 Tax=Lactobacillus saliva... 46 3e-04 UniRef50_C8T7G4 HTH-type transcriptional regulator RdgA n=1 Tax=... 46 3e-04 UniRef50_B4W911 Helix-turn-helix domain protein n=1 Tax=Brevundi... 46 3e-04 UniRef50_A9YWX7 Putative repressor n=3 Tax=root RepID=A9YWX7_9CAUD 46 4e-04 UniRef50_Q5L2Q2 Transcriptional regulator n=3 Tax=Geobacillus ka... 46 4e-04 UniRef50_B3IRK9 Helix-turn-helix domain protein n=2 Tax=Escheric... 46 4e-04 UniRef50_B2PWM7 Putative uncharacterized protein n=2 Tax=Provide... 46 4e-04 UniRef50_C2Q4Y2 Putative uncharacterized protein n=1 Tax=Bacillu... 46 4e-04 UniRef50_B0NKE5 Putative uncharacterized protein n=3 Tax=Firmicu... 46 4e-04 UniRef50_O48389 Repressor n=1 Tax=Streptococcus phage TP-J34 Rep... 46 4e-04 UniRef50_D0ZTD0 Regulatory protein n=8 Tax=root RepID=D0ZTD0_SALT1 46 4e-04 UniRef50_C7WFT7 Predicted protein n=22 Tax=Enterococcus faecalis... 46 4e-04 UniRef50_Q4L9W0 Similar to unknown protein n=4 Tax=Staphylococcu... 46 4e-04 UniRef50_C0BZ66 Putative uncharacterized protein n=1 Tax=Clostri... 46 5e-04 UniRef50_B4EYH8 Fimbrial operon regulator n=2 Tax=Proteus mirabi... 46 5e-04 UniRef50_C3DY68 Helix-turn-helix domain protein n=1 Tax=Bacillus... 45 5e-04 UniRef50_Q2RLS7 Transcriptional regulator, XRE family n=1 Tax=Mo... 45 5e-04 UniRef50_C8TM97 Predicted phage repressor protein n=15 Tax=Esche... 45 5e-04 UniRef50_A8RWL6 Putative uncharacterized protein n=1 Tax=Clostri... 45 5e-04 UniRef50_C9BLS2 Helix-turn-helix domain-containing protein n=6 T... 45 6e-04 UniRef50_Q6J2I4 PbsX-like transcriptional regulator n=2 Tax=Pseu... 45 6e-04 UniRef50_B7KTG3 Putative phage repressor n=2 Tax=Methylobacteriu... 45 6e-04 UniRef50_A8S5E8 Putative uncharacterized protein n=1 Tax=Clostri... 45 6e-04 UniRef50_B7ANE0 Putative uncharacterized protein n=2 Tax=Bacteri... 45 6e-04 UniRef50_A7JUV7 Putative uncharacterized protein n=1 Tax=Mannhei... 45 6e-04 UniRef50_C9AY67 Predicted protein n=4 Tax=Enterococcus RepID=C9A... 45 6e-04 UniRef50_A9HWQ2 Putative DNA-binding protein n=1 Tax=Bordetella ... 45 6e-04 UniRef50_A9NHP5 Membrane-anchored DNA-binding protein, putative ... 45 7e-04 UniRef50_Q28NZ2 Transcriptional regulator, XRE family n=1 Tax=Ja... 45 7e-04 UniRef50_A8UD60 DNA-binding protein n=2 Tax=Carnobacterium sp. A... 45 7e-04 UniRef50_Q70CB1 Putative transcriptional regulator n=2 Tax=Strep... 45 7e-04 UniRef50_C2HKP6 XRE family transcriptional regulator n=2 Tax=Lac... 45 7e-04 UniRef50_P96631 HTH-type transcriptional regulator immR n=1 Tax=... 45 7e-04 UniRef50_Q3AB02 DNA-binding protein n=2 Tax=Clostridia RepID=Q3A... 45 7e-04 UniRef50_A6X8F8 Cupin 2 conserved barrel domain protein n=2 Tax=... 45 7e-04 UniRef50_C5EPX3 Predicted protein n=1 Tax=Clostridiales bacteriu... 45 8e-04 UniRef50_C3X9A6 Predicted protein n=2 Tax=Oxalobacter formigenes... 45 8e-04 UniRef50_C6JFU4 Predicted protein n=1 Tax=Ruminococcus sp. 5_1_3... 45 8e-04 UniRef50_B6G1K3 Putative uncharacterized protein n=1 Tax=Clostri... 45 8e-04 UniRef50_C4F7R9 Putative uncharacterized protein n=1 Tax=Collins... 45 0.001 UniRef50_Q7N301 Similar to bacteriophage repressor protein CI n=... 45 0.001 UniRef50_Q2W6H5 Predicted transcriptional regulator n=14 Tax=Alp... 45 0.001 UniRef50_C5SE84 Transcriptional regulator, XRE family n=1 Tax=Al... 45 0.001 UniRef50_A6P0G8 Putative uncharacterized protein n=1 Tax=Bactero... 45 0.001 UniRef50_C5ETI6 Predicted protein n=3 Tax=Clostridiales RepID=C5... 45 0.001 UniRef50_C9B2Y2 Predicted protein n=2 Tax=Enterococcus casselifl... 45 0.001 UniRef50_B8F9V4 Transcriptional regulator, XRE family n=1 Tax=De... 45 0.001 UniRef50_A7VII3 Putative uncharacterized protein n=1 Tax=Clostri... 44 0.001 UniRef50_C0GHG0 Transcriptional regulator, XRE family n=1 Tax=De... 44 0.001 UniRef50_A3ICU1 Putative uncharacterized protein n=1 Tax=Bacillu... 44 0.001 UniRef50_A7DV91 DNA-binding protein RDGA n=1 Tax=Vibrio vulnific... 44 0.001 UniRef50_B5UTN8 Transcriptional regulator Xre n=10 Tax=Bacillus ... 44 0.001 UniRef50_C1D869 CI protein n=1 Tax=Laribacter hongkongensis HLHK... 44 0.001 UniRef50_C3RJ47 Predicted protein n=2 Tax=Bacteria RepID=C3RJ47_... 44 0.001 UniRef50_Q0C575 DNA-binding protein n=1 Tax=Hyphomonas neptunium... 44 0.001 UniRef50_D2U1N2 Phage transcriptional regulator n=1 Tax=Arsenoph... 44 0.001 UniRef50_D2LE89 Transcriptional regulator, XRE family n=1 Tax=Rh... 44 0.001 UniRef50_C7N0U4 Predicted transcriptional regulator n=1 Tax=Slac... 44 0.001 UniRef50_C8ZY37 Transcriptional regulator n=4 Tax=Enterococcus R... 44 0.001 UniRef50_C8WKX0 Transcriptional regulator, XRE family n=1 Tax=Eg... 44 0.002 UniRef50_A3CR12 Transcriptional regulator, XRE family, putative ... 44 0.002 UniRef50_B5Q1C0 Transcriptional regulator, XRE family n=1 Tax=Sa... 44 0.002 UniRef50_A1VSI6 Putative transcriptional regulator, XRE family n... 44 0.002 UniRef50_Q161J2 Helix-turn-helix domain protein, putative n=19 T... 44 0.002 UniRef50_A4JWD1 Putative phage repressor n=1 Tax=Burkholderia vi... 44 0.002 UniRef50_C7T8R9 Putative uncharacterized protein n=2 Tax=Lactoba... 44 0.002 UniRef50_B4RE45 Transcriptional regulator, Cro/CI family n=1 Tax... 44 0.002 UniRef50_C0GLD1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 44 0.002 UniRef50_Q48DU9 RtrR protein n=10 Tax=Gammaproteobacteria RepID=... 44 0.002 UniRef50_B5XSM2 DNA-binding protein n=7 Tax=Enterobacteriaceae R... 44 0.002 UniRef50_A8V2S1 Putative uncharacterized protein n=1 Tax=Hydroge... 44 0.002 UniRef50_C4LFU1 Transcriptional regulator, XRE family n=1 Tax=To... 44 0.002 UniRef50_B1HS96 Transcriptional regulator (Phage-related) n=2 Ta... 44 0.002 UniRef50_A3M515 Transcriptional regulator Cro/CI family n=2 Tax=... 44 0.002 UniRef50_C2CIB8 DNA-binding protein n=2 Tax=Clostridiales RepID=... 44 0.002 UniRef50_D1BQX9 Transcriptional regulator, XRE family n=2 Tax=Ve... 44 0.002 UniRef50_D1AGN9 Transcriptional regulator, XRE family n=1 Tax=Se... 44 0.002 UniRef50_A9C1N8 Transcriptional regulator, XRE family n=1 Tax=De... 44 0.002 UniRef50_A6LTV9 Helix-turn-helix domain protein n=1 Tax=Clostrid... 44 0.002 UniRef50_B8CP56 Repressor of flagellae, putative n=1 Tax=Shewane... 44 0.002 UniRef50_A3VTK2 Transcriptional regulator, XRE family protein n=... 43 0.002 UniRef50_C8T0E1 Repressor protein cI n=1 Tax=Klebsiella pneumoni... 43 0.002 UniRef50_B5ZDN3 Transcriptional regulator, XRE family n=4 Tax=Al... 43 0.002 UniRef50_Q1CP27 Transcriptional regulator, Cro/CI family n=8 Tax... 43 0.003 UniRef50_C3FZZ5 Putative uncharacterized protein n=1 Tax=Bacillu... 43 0.003 UniRef50_Q0AK74 Transcriptional regulator, XRE family n=2 Tax=Al... 43 0.003 UniRef50_Q5FSV4 Transcriptional regulator n=1 Tax=Gluconobacter ... 43 0.003 UniRef50_C7VU74 Cro/CI family transcriptional regulator n=1 Tax=... 43 0.003 UniRef50_B4W5L7 Helix-turn-helix domain protein n=2 Tax=Brevundi... 43 0.003 UniRef50_B0G8M8 Putative uncharacterized protein n=2 Tax=Clostri... 43 0.003 UniRef50_Q97D35 Predicted transcriptional regulator, containing ... 43 0.003 UniRef50_B1L086 DNA-binding protein n=11 Tax=Clostridium RepID=B... 43 0.003 UniRef50_D1EET7 Transcriptional regulator n=13 Tax=Neisseria Rep... 43 0.003 UniRef50_B3WV03 Repressor protein C2 n=3 Tax=Enterobacteriaceae ... 43 0.003 UniRef50_B0ACL3 Putative uncharacterized protein n=1 Tax=Clostri... 43 0.003 UniRef50_C4VDR0 Helix-turn-helix domain protein n=6 Tax=Enteroco... 43 0.003 UniRef50_C3CR43 Transcriptional regulator, XRE n=6 Tax=Bacillus ... 43 0.003 UniRef50_A6UXD9 Conserved domain protein n=2 Tax=Pseudomonas aer... 43 0.003 UniRef50_B0USW4 Putative prophage repressor n=2 Tax=Pasteurellac... 43 0.003 UniRef50_C7XUY0 Transcriptional regulator n=1 Tax=Lactobacillus ... 43 0.003 UniRef50_C9AUI7 Predicted protein n=3 Tax=Enterococcus casselifl... 43 0.004 UniRef50_A3V3P1 Transcriptional regulator, XRE family n=2 Tax=Rh... 43 0.004 UniRef50_C9BZU2 Phage CI repressor n=3 Tax=Enterococcus faecium ... 43 0.004 UniRef50_C8WQU2 Transcriptional regulator, XRE family n=2 Tax=Al... 43 0.004 UniRef50_B4EV64 Fimbrial operon regulator n=4 Tax=Proteus mirabi... 43 0.004 UniRef50_A6NPM4 Putative uncharacterized protein n=1 Tax=Bactero... 43 0.004 UniRef50_B8H0Z2 Transcriptional regulator n=2 Tax=Caulobacter vi... 43 0.004 UniRef50_A9IWS2 Transcriptional regulator n=2 Tax=Bartonella Rep... 43 0.004 UniRef50_A8S6P9 Putative uncharacterized protein n=1 Tax=Faecali... 43 0.004 UniRef50_B6FKN1 Putative uncharacterized protein n=1 Tax=Clostri... 43 0.004 UniRef50_C0B6V1 Putative uncharacterized protein n=1 Tax=Coproco... 43 0.004 UniRef50_UPI0001695282 hypothetical phagelike protein n=1 Tax=Pa... 42 0.004 UniRef50_C2IPU3 Putative uncharacterized protein n=1 Tax=Vibrio ... 42 0.004 UniRef50_B0NC49 Putative uncharacterized protein n=1 Tax=Clostri... 42 0.004 UniRef50_Q1GXR4 Transcriptional regulator, XRE family n=1 Tax=Me... 42 0.004 UniRef50_Q0H244 Immunity repressor protein n=1 Tax=Geobacillus p... 42 0.004 UniRef50_Q1JZ74 Putative phage repressor n=1 Tax=Desulfuromonas ... 42 0.005 UniRef50_C8ZWK7 DNA binding protein n=4 Tax=Enterococcus RepID=C... 42 0.005 UniRef50_B5K607 Transcriptional regulator, XRE family n=5 Tax=Rh... 42 0.005 UniRef50_C2R1U7 Putative uncharacterized protein n=3 Tax=Bacillu... 42 0.005 UniRef50_C9XZQ4 26 kDa repressor protein n=1 Tax=Cronobacter tur... 42 0.005 UniRef50_C7N3U3 Predicted transcriptional regulator n=1 Tax=Slac... 42 0.005 UniRef50_D0RVK3 Phage transcriptional regulator n=1 Tax=Streptoc... 42 0.005 UniRef50_C7H5C2 Toxin-antitoxin system, antitoxin component, Xre... 42 0.005 UniRef50_C1TL49 Predicted transcriptional regulator n=2 Tax=Deth... 42 0.005 UniRef50_A4ND54 Probable transcription regulator n=2 Tax=Pasteur... 42 0.005 UniRef50_B0SXV6 Transcriptional regulator, XRE family n=1 Tax=Ca... 42 0.005 UniRef50_B0K5Y3 Helix-turn-helix domain protein n=9 Tax=Thermoan... 42 0.005 UniRef50_C6L9K9 DNA-binding protein n=1 Tax=Bryantella formatexi... 42 0.005 UniRef50_UPI0001C35F8B hypothetical protein ChatD1_28899 n=1 Tax... 42 0.005 UniRef50_B9J6N5 Transcriptional regulator n=1 Tax=Bacillus cereu... 42 0.006 UniRef50_C0AWV5 Putative uncharacterized protein n=1 Tax=Proteus... 42 0.006 UniRef50_C0EBZ8 Putative uncharacterized protein n=2 Tax=Clostri... 42 0.006 UniRef50_D2LZS5 Transcriptional regulator, XRE family n=2 Tax=Ba... 42 0.006 UniRef50_C3RRC1 DNA-binding protein n=3 Tax=Bacteria RepID=C3RRC... 42 0.006 UniRef50_B9YAR3 Putative uncharacterized protein n=1 Tax=Holdema... 42 0.006 UniRef50_B4ESL5 Phage reprossor n=2 Tax=Enterobacteriaceae RepID... 42 0.006 UniRef50_C6IXM6 SOS-response transcriptional repressor n=1 Tax=P... 42 0.006 UniRef50_D0J194 Transcriptional regulator, XRE family n=1 Tax=Co... 42 0.006 UniRef50_C6J5T6 Helix-turn-helix domain-containing protein n=2 T... 42 0.007 UniRef50_Q4KKB9 DNA-binding protein, putative n=1 Tax=Pseudomona... 42 0.007 >UniRef50_P06966 HTH-type transcriptional regulator dicA n=10 Tax=Enterobacteriaceae RepID=DICA_ECOLI Length = 135 Score = 275 bits (704), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 135/135 (100%), Positives = 135/135 (100%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ Sbjct: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 Query: 61 CSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNK 120 CSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNK Sbjct: 61 CSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNK 120 Query: 121 LFEELLKARQRTNKR 135 LFEELLKARQRTNKR Sbjct: 121 LFEELLKARQRTNKR 135 >UniRef50_C8TRW1 Predicted phage repressor CI n=30 Tax=Enterobacteriaceae RepID=C8TRW1_ECO26 Length = 135 Score = 149 bits (375), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 73/127 (57%), Positives = 95/127 (74%), Gaps = 2/127 (1%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 T+G+RIR RRK + +Q L+KA +S S+S WE + P G+NL L++VLQCSPTWI Sbjct: 5 TLGQRIRERRKQVGLSQNGLSKAAGVSGSSISLWESDHTAPRGQNLHRLAEVLQCSPTWI 64 Query: 67 LFGDEDKQPTPPV--EKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEE 124 LFGDEDK P PPV + + LS ELE+L L+ ALP+SEQ QL+E+RARV+NFN+LF E Sbjct: 65 LFGDEDKTPAPPVSLDSALDLSEDELEMLRLYRALPKSEQQAQLSELRARVENFNRLFTE 124 Query: 125 LLKARQR 131 LL+AR+R Sbjct: 125 LLEARKR 131 >UniRef50_D2U099 Phage transcriptional regulator n=1 Tax=Arsenophonus nasoniae RepID=D2U099_9ENTR Length = 137 Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 60/132 (45%), Positives = 89/132 (67%), Gaps = 4/132 (3%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 T+GERI+ RR+ LK +QR+LA L I+HVS+SQWER +S P G+NL AL+K L C P+W Sbjct: 5 TLGERIKARRQELKLSQRALASILGIAHVSISQWERNESTPKGENLMALAKTLHCEPSW- 63 Query: 67 LFGDEDKQPTPPV---EKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFE 123 LF ++ P E P+ LS + LL+LF+ LP+SEQ+ + +R + + +++LFE Sbjct: 64 LFEEQGNLPISASELPEAPIKLSDLQKTLLDLFDELPDSEQEELVESLREKKQYYDQLFE 123 Query: 124 ELLKARQRTNKR 135 +L K R R N++ Sbjct: 124 QLAKKRIRINRQ 135 >UniRef50_D2U4L3 Phage transcriptional regulator n=1 Tax=Arsenophonus nasoniae RepID=D2U4L3_9ENTR Length = 137 Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 52/125 (41%), Positives = 75/125 (60%), Gaps = 5/125 (4%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 ME K +IGERIR RRK L+ TQ+ L K + +SHV++SQWE+ ++EP G NL +L+ L Sbjct: 1 MEMK--SIGERIRLRRKELELTQKQLGKRVGVSHVAISQWEKEETEPKGDNLLSLADALM 58 Query: 61 CSPTWILFGDEDKQPT---PPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKN 117 C+ +IL G ++P K L+ +E LLE+FNAL E EQ L E+ N Sbjct: 59 CTAEYILRGTTSEKPIRCDNDTYKYSRLTKREENLLEMFNALTEDEQKNYLKEITETRAN 118 Query: 118 FNKLF 122 +++ Sbjct: 119 LERIY 123 >UniRef50_P69202 Repressor protein C2 n=23 Tax=root RepID=RPC2_BPP22 Length = 216 Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 37/63 (58%), Positives = 49/63 (77%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 +GERIR RRK LK Q +L K + +S+V++SQWER ++EP G+NL ALSK LQCSP ++L Sbjct: 6 MGERIRARRKKLKIRQAALGKMVGVSNVAISQWERSETEPNGENLLALSKALQCSPDYLL 65 Query: 68 FGD 70 GD Sbjct: 66 KGD 68 >UniRef50_D2TX49 Phage transcriptional regulator n=1 Tax=Arsenophonus nasoniae RepID=D2TX49_9ENTR Length = 237 Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 34/68 (50%), Positives = 49/68 (72%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 +I RIR RRK L+ TQ +AKAL +S VSV++WE GD++P G+NL L+KVL C+ W+ Sbjct: 20 SISNRIRDRRKELRLTQNEIAKALGVSRVSVTKWENGDTKPDGENLHILTKVLACNIEWL 79 Query: 67 LFGDEDKQ 74 L+G + + Sbjct: 80 LYGKDSRS 87 >UniRef50_A7JPM0 Possible LexA family repressor/S24 family protease n=4 Tax=Proteobacteria RepID=A7JPM0_PASHA Length = 218 Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 36/72 (50%), Positives = 50/72 (69%), Gaps = 1/72 (1%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALK-ISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 T+G+RI+ RRK LK TQ+ LA ALK +SHV+VSQWE ++P +N+ LS VLQC +W Sbjct: 5 TLGDRIKSRRKELKLTQKDLATALKGVSHVAVSQWESSTTKPNSENILDLSTVLQCDISW 64 Query: 66 ILFGDEDKQPTP 77 +L G+ + P Sbjct: 65 LLRGNGESNVLP 76 >UniRef50_D2TVN8 Phage transcriptional regulator n=1 Tax=Arsenophonus nasoniae RepID=D2TVN8_9ENTR Length = 130 Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 40/119 (33%), Positives = 65/119 (54%), Gaps = 4/119 (3%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 IG RI RR L LA + +S V+VSQWERG S G L +S+ L+CSP WI Sbjct: 8 AIGRRIYERRTELGLRAIDLADLIGVSRVAVSQWERGVSVLGGDKLMNISEALKCSPEWI 67 Query: 67 LFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEEL 125 + G + + + + + ++++L L LP++E+D + + +V+ + KL+ EL Sbjct: 68 IAGIDRLEKI----QDLNIEASDIKILRLAQQLPDTEKDNLIKMLEDKVEYYRKLYTEL 122 >UniRef50_C6M778 HTH-type transcriptional regulator DicA n=1 Tax=Neisseria sicca ATCC 29256 RepID=C6M778_NEISI Length = 218 Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 37/73 (50%), Positives = 50/73 (68%), Gaps = 1/73 (1%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALK-ISHVSVSQWERGDSEPTGKNLFALSKVLQCSP 63 N TIG+RIR +RK K TQ+ LAK LK ISHV++SQWE ++P +NL+ LS+VL C Sbjct: 2 NKTIGQRIRQKRKEFKWTQQELAKKLKDISHVAISQWESNTTKPNAENLYELSQVLGCDL 61 Query: 64 TWILFGDEDKQPT 76 W+L G+ + T Sbjct: 62 GWLLKGEGEDTNT 74 >UniRef50_Q12J32 Transciptional regulator n=10 Tax=Shewanella RepID=Q12J32_SHEDO Length = 229 Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 32/71 (45%), Positives = 49/71 (69%) Query: 10 ERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFG 69 ERI+ RRK L TQ S+AK + ++ ++S WE G + P G+NL AL+K L+C+P ++LFG Sbjct: 4 ERIKQRRKELGLTQPSIAKTIGLTKATISLWESGSTSPKGENLHALAKALRCAPEFLLFG 63 Query: 70 DEDKQPTPPVE 80 ++ +P P E Sbjct: 64 NDSIKPEPNAE 74 >UniRef50_C4X6V4 Putative repressor protein of prophage n=2 Tax=Enterobacteriaceae RepID=C4X6V4_KLEPN Length = 241 Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 7/97 (7%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + +RIR RRK LK TQ L K + ++ V+V+ WE GD P G NL ALS L+CSP W Sbjct: 24 MKMNDRIRARRKELKLTQAVLGKLVGVNRVTVTGWESGDYAPGGSNLQALSAALKCSPKW 83 Query: 66 ILFG----DEDKQPTPPVEKPVALSPKELELLELFNA 98 ++ G D ++ P EK KE+ +L A Sbjct: 84 LIDGIGEPDNEEPSFRPTEK---FGVKEIPVLSWVQA 117 >UniRef50_D2U0V0 Phage transcriptional regulator n=1 Tax=Arsenophonus nasoniae RepID=D2U0V0_9ENTR Length = 232 Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 31/62 (50%), Positives = 41/62 (66%) Query: 10 ERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFG 69 ERIR R + K TQ SL K + +S ++SQWE G +EP GKNL +L+K L + W+L G Sbjct: 4 ERIRQARNHNKMTQESLGKRIGVSKATISQWESGTTEPNGKNLVSLAKALGVTIEWLLDG 63 Query: 70 DE 71 DE Sbjct: 64 DE 65 >UniRef50_C7BH54 Similar to dica, regulator of dicb encoded by prophage cp-933 (Putative regulatory protein) n=1 Tax=Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 RepID=C7BH54_PHOAA Length = 135 Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 45/123 (36%), Positives = 63/123 (51%), Gaps = 2/123 (1%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALK-ISHVSVSQWERGDSEPTGKNLFALSKVLQCSP 63 N +IG RI+ R K +Q +LA+ S + +E G + + LSK L SP Sbjct: 4 NESIGARIKRLRNQQKMSQAALAELCGWASQSRIGNYESGIRNVSTDDAVILSKALGVSP 63 Query: 64 TWILFGD-EDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLF 122 ++FGD E Q E LS +E LLELFN LP+SE D L + + + +N+L Sbjct: 64 AELMFGDAESSQENETSETCQELSNREKILLELFNELPDSEADELLKTLEEKKRYYNQLL 123 Query: 123 EEL 125 EEL Sbjct: 124 EEL 126 >UniRef50_B4ETH6 Putative phage repressor n=1 Tax=Proteus mirabilis HI4320 RepID=B4ETH6_PROMH Length = 215 Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 31/64 (48%), Positives = 44/64 (68%) Query: 11 RIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFGD 70 RI+ RR L TQ +LAK L +S VS+++WE +EP G+NL AL+KVL+ SP W+L+G Sbjct: 4 RIKERRLQLSLTQEALAKMLSVSRVSITKWETRVTEPDGENLQALAKVLEVSPEWLLYGG 63 Query: 71 EDKQ 74 + Sbjct: 64 NSSE 67 >UniRef50_B3IN07 Repressor protein C2 n=2 Tax=Escherichia coli RepID=B3IN07_ECOLX Length = 224 Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 37/65 (56%), Positives = 50/65 (76%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 TI ERIR RRK++ TQ+ +AKA+ IS VSV++WE G S+P G+NL+ LSK+L SP WI Sbjct: 4 TISERIRNRRKDVGLTQQQVAKAIGISRVSVTKWENGSSKPDGENLYLLSKLLSKSPEWI 63 Query: 67 LFGDE 71 L+G + Sbjct: 64 LYGKD 68 >UniRef50_A7FIY9 Repressor protein C2 n=2 Tax=Yersinia RepID=A7FIY9_YERP3 Length = 236 Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 32/63 (50%), Positives = 44/63 (69%) Query: 10 ERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFG 69 +RIR RR L TQ LAKA+ +S VSV++WE G ++P G+NL L++ L C+P WIL+G Sbjct: 23 DRIRLRRLQLDLTQLQLAKAIGVSRVSVTKWESGITKPDGENLHRLAQTLSCTPEWILYG 82 Query: 70 DED 72 D Sbjct: 83 TGD 85 >UniRef50_C5EI29 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EI29_9FIRM Length = 146 Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 42/120 (35%), Positives = 65/120 (54%), Gaps = 5/120 (4%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M+ + +G RI+ RRK L TQ+ + A IS+ ++S+ ERG+ P+ K L +LSK+LQ Sbjct: 1 MDNIDKMVGIRIKTRRKELNLTQKDVYAATGISNGNLSEIERGNVLPSSKALVSLSKLLQ 60 Query: 61 CSPTWILFG-----DEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARV 115 S WIL G D T +E + L+ E ++ + +LP EQ +RA+V Sbjct: 61 TSIDWILTGEASIIDNSSPKTSNIEYSLKLNESEELIIFMLRSLPLEEQLDVKNYLRAKV 120 >UniRef50_B5EK35 Transcriptional regulator, XRE family n=2 Tax=Acidithiobacillus ferrooxidans ATCC 53993 RepID=B5EK35_ACIF5 Length = 152 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 18/142 (12%) Query: 8 IGERIRYRRKNLKHTQRSLAK-ALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 IG+R++ RK L TQ L K A +S +V QWE G ++P L AL K L +P W+ Sbjct: 8 IGDRVKKIRKRLGLTQAELGKHAGGLSKSAVHQWENGGTKPAWDALTALRKNLGINPDWV 67 Query: 67 LFGDE---DKQPTPPVEKPV------------ALSPKELELLELFNALPESEQDTQLAEM 111 + G+ + TP + L+P++ +L +F+ L S+QD + E+ Sbjct: 68 MQGEGAMLQELGTPNAATSIESGADALPFDGRGLTPRQRAMLGIFDRLTSSQQDEAMREL 127 Query: 112 RARVKNFNKLFEELLKARQRTN 133 + ++ EEL R++TN Sbjct: 128 EETKRKNEEIIEEL--TRRKTN 147 >UniRef50_D2TX37 Phage transcriptional regulator n=1 Tax=Arsenophonus nasoniae RepID=D2TX37_9ENTR Length = 220 Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 46/69 (66%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 ME+ T+G+R++Y RK K+TQ +L KA+ ++ V+V WE+ +EP GK L L++ L Sbjct: 1 MESIVKTLGQRLKYLRKLKKYTQVTLGKAIGVTGVTVGYWEKDLNEPGGKALSKLARALN 60 Query: 61 CSPTWILFG 69 + ++L+G Sbjct: 61 TTENYLLYG 69 >UniRef50_A1JLW6 Putative DNA-binding protein n=1 Tax=Yersinia enterocolitica subsp. enterocolitica 8081 RepID=A1JLW6_YERE8 Length = 139 Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 2/105 (1%) Query: 25 SLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFGDEDKQPTPPVEKPVA 84 LA+ IS + +W S + + LS+ S +W+L DE + +P+ Sbjct: 29 GLARICGISPQAAGRWFTKGS-ISKDSALKLSEAFGVSLSWLL-SDERDSDDCSIFQPLV 86 Query: 85 LSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEELLKAR 129 LS ++ ELL LF LPES++D + +R +V+N+++LF ELL++R Sbjct: 87 LSERQRELLNLFERLPESDKDNHIETLRIKVENYDRLFNELLESR 131 >UniRef50_B9Z4Y0 Transcriptional regulator, XRE family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z4Y0_9NEIS Length = 119 Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 6/113 (5%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + IG RI+ RK + TQ+ LA + + SVSQWE G++EPT N ++++ L+ S W Sbjct: 1 MIIGFRIKEARKARRRTQKWLADEVGVKQSSVSQWEMGETEPTTANCSSVAQALRISFEW 60 Query: 66 ILFGDEDKQPTPP------VEKPVALSPKELELLELFNALPESEQDTQLAEMR 112 + G + T E L + ELL LF+ LP+ ++ L MR Sbjct: 61 LTTGRGEMDVTYASAVVHVAEPGQDLDDDKKELLALFDQLPKKKRQILLQFMR 113 >UniRef50_B5R8N7 Predicted phage regulatory protein n=9 Tax=Enterobacteriaceae RepID=B5R8N7_SALG2 Length = 132 Score = 57.8 bits (138), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 8/131 (6%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVS-VSQWERGDSEPTGKNLFALSKVL 59 M+T IGER++ R+N + LAK S S ++ +E G ++ L +VL Sbjct: 1 MKTIAEQIGERLKTIRQNRGLSMGRLAKLCGWSGSSRIANYEAGTRSIGAEDAITLGQVL 60 Query: 60 QCSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFN 119 SP ++FG ++ + LS + +LLELFN LP SEQ L R+K + Sbjct: 61 GISPAELMFGKQENANS-------WLSDNQQKLLELFNQLPASEQTRMLDLFEIRLKEID 113 Query: 120 KLFEELLKARQ 130 + E+ L++RQ Sbjct: 114 EYVEQYLRSRQ 124 >UniRef50_A4SLB7 Phage repressor n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SLB7_AERS4 Length = 227 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 2/74 (2%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +TI +RI RR L ++ +LAKA+ +S VSV +WE G ++P G+ L L+ L + W Sbjct: 1 MTISDRIFSRRTALNLSKTALAKAIGVSDVSVGKWESGLNQPKGRYLNDLAAALGVTVDW 60 Query: 66 ILFGDED--KQPTP 77 +L G D +QP P Sbjct: 61 LLAGSGDGPEQPIP 74 >UniRef50_Q5E364 Transcriptional repressor, Cro/CI family n=1 Tax=Vibrio fischeri ES114 RepID=Q5E364_VIBF1 Length = 215 Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 28/69 (40%), Positives = 42/69 (60%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 T G R+ + RK K TQ S+AKA +S SV+ WE+ ++P G++L AL+ L+C W+ Sbjct: 3 TFGSRLFHLRKARKLTQSSIAKASGVSRSSVTLWEQDTNKPKGESLMALASFLKCDVNWL 62 Query: 67 LFGDEDKQP 75 L G +P Sbjct: 63 LTGQGSPEP 71 >UniRef50_Q5DY86 DNA-binding protein RDGA n=1 Tax=Vibrio fischeri ES114 RepID=Q5DY86_VIBF1 Length = 203 Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 26/65 (40%), Positives = 44/65 (67%), Gaps = 1/65 (1%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 I R++ +RK L+++QR LA + ++ ++SQWER ++ P G++L L++VL C+ W L Sbjct: 4 ISIRLKEKRKALRYSQRKLADLVNVTTSAISQWEREETTPKGEHLVRLAEVLNCTVQW-L 62 Query: 68 FGDED 72 G ED Sbjct: 63 VGTED 67 >UniRef50_Q2SPC6 SOS-response transcriptional repressors (RecA-mediated autopeptidase) n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SPC6_HAHCH Length = 195 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 19/44 (43%), Positives = 32/44 (72%) Query: 30 LKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFGDEDK 73 +++SHV++SQWE+G++ P G+NL L L C P W+L+G ++ Sbjct: 2 VRVSHVTISQWEKGETSPRGENLHLLCSALSCQPDWLLYGKAER 45 >UniRef50_Q5ZTV2 Hypothetical phage repressor n=1 Tax=Legionella pneumophila subsp. pneumophila str. Philadelphia 1 RepID=Q5ZTV2_LEGPH Length = 207 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 33/75 (44%), Positives = 40/75 (53%), Gaps = 1/75 (1%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M+ K L IG RI+ RKN K T LA+ S +S WERG P K+ L L Sbjct: 9 MDIK-LKIGLRIKESRKNKKFTAVQLAEVTGFSAQRISNWERGTRTPRFKDAEILGSALG 67 Query: 61 CSPTWILFGDEDKQP 75 SPTW+LF D D +P Sbjct: 68 VSPTWLLFLDIDHKP 82 >UniRef50_B2TZ32 Helix-turn-helix domain protein n=4 Tax=root RepID=B2TZ32_SHIB3 Length = 109 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 5/82 (6%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 ++ KN I R+R +R+ T LA+ L + + QWE G+ EPT L L+ +L Sbjct: 3 LQNKNSAINNRLRTQREACGLTTAELARLLDLDEEIIIQWESGEYEPTISMLIPLANILG 62 Query: 61 CSPTWILFGDEDKQPTPPVEKP 82 C P W+L G+ TPP E+P Sbjct: 63 CDPMWLLTGE----VTPP-EQP 79 >UniRef50_C6J5N1 Predicted protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J5N1_9BACL Length = 115 Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 6/117 (5%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + +GE++R RK+ + Q+ A + +S ++S ERG P+ + + AL QC W Sbjct: 1 MNLGEKVRTIRKSHELNQKEFALKIGVSQGTLSDIERGVCLPSCETIIALKNTFQCDLNW 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQD--TQLAEMRARVKNFNK 120 +L D D+ + + P +S +EL+LL ALP E++ ++ E++ R + K Sbjct: 61 LL-SDYDESFS---QTPTYISSEELKLLTSIRALPAQEKNELYEIIEIKMRKNKYPK 113 >UniRef50_A1ACF7 Putative transcriptional regulator n=9 Tax=Enterobacteriaceae RepID=A1ACF7_ECOK1 Length = 139 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 66/112 (58%), Gaps = 4/112 (3%) Query: 23 QRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFGDEDKQPTPPVEKP 82 Q +A+ +K++ +VS+W G++ P + L L+ ++ +PT++L ED + + V Sbjct: 30 QAEIARRMKLTPKAVSKWFNGETIPRREKLRELATLIGTTPTYLL--GEDTEESGQVRFY 87 Query: 83 VALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEELLKARQRTNK 134 L+P++ +++L + LP+SE D L + + + +N ++EEL AR++ K Sbjct: 88 QELNPRQKIIIDLLDELPDSETDELLKTLEEKKQKYNAIYEEL--ARKKKQK 137 >UniRef50_B2T1W8 Transcriptional regulator, XRE family n=1 Tax=Burkholderia phytofirmans PsJN RepID=B2T1W8_BURPP Length = 129 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/95 (31%), Positives = 57/95 (60%), Gaps = 8/95 (8%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSE-PTGKNLFALSKVLQCSPTW 65 TIG RI+ RR++L + R LA A+ IS+ +V++ E+ S+ P+ +NLF L+ L+ P + Sbjct: 3 TIGTRIQRRREDLNLSTRQLAGAVGISNAAVTKLEKDQSKSPSAENLFRLAIALKTDPQY 62 Query: 66 ILFGDEDKQPTPPVEK-------PVALSPKELELL 93 +L+G++ + + P ++S +++E L Sbjct: 63 LLYGEQRYKFAAGSSREKQAESWPFSVSARQIEAL 97 >UniRef50_A6WVE6 Putative phage repressor n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6WVE6_OCHA4 Length = 235 Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 4/83 (4%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 TIG+RIR R TQ+ LA I+ VSV+QWE ++P L L+++L W Sbjct: 3 TIGDRIRRARTQKGFTQQQLADHFGIARVSVTQWENNTTQPGSDKLIGLTELLGGDAEWY 62 Query: 67 LFGDEDKQPTPPVEKPVALSPKE 89 + G PP+ V ++ K+ Sbjct: 63 ITG----HGMPPISDGVRIAVKQ 81 >UniRef50_C6IZ53 Predicted protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZ53_9BACL Length = 127 Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 11/122 (9%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 T+GERI+Y R+ + TQ+ LA +IS V +S++E D +P + L + L S ++ Sbjct: 12 TLGERIKYLRELRQLTQKDLASQAEISVVQLSRYETNDRKPDPEVLRNIVDALDTSADYL 71 Query: 67 LFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEELL 126 L D P+P EK ++LS F PE+ ++A M A +K + + ++LL Sbjct: 72 LGRTND--PSPAAEKGMSLS---------FFGGPEAYTADEIAMMEAALKAYREQKKKLL 120 Query: 127 KA 128 Sbjct: 121 DG 122 >UniRef50_A2UZN6 Transcriptional regulator, XRE family n=1 Tax=Shewanella putrefaciens 200 RepID=A2UZN6_SHEPU Length = 182 Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 3/121 (2%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 ME N++IG ++ RR L Q +A+ L ++ +VS+WER +EP + LSK+L+ Sbjct: 1 MENLNMSIGSVLKDRRIALNIKQEDIAEQLGLTVQTVSKWERDLTEPKASQVTQLSKILK 60 Query: 61 CSPTWILFGDEDKQPTPPVE--KPVALSPKELELLELFNALPESEQDTQ-LAEMRARVKN 117 + I G+ P+E + V + E+ EL + E DT+ +M ARV + Sbjct: 61 IAEKDICSGEIKHLKMDPLEFVRRVGILMNEVPQTELLIGMHEYINDTEGFIDMLARVSS 120 Query: 118 F 118 + Sbjct: 121 Y 121 >UniRef50_D2U1D8 Phage transcriptional regulator n=1 Tax=Arsenophonus nasoniae RepID=D2U1D8_9ENTR Length = 209 Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 42/74 (56%) Query: 4 KNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSP 63 K TI ERI R + LK + + KA K S +VSQW G ++P+ + AL+ VL+ S Sbjct: 2 KKTTINERIILRMRQLKLKHKDIVKATKASKGAVSQWVNGGNKPSADYVAALAHVLKVSE 61 Query: 64 TWILFGDEDKQPTP 77 W+L G+ + + P Sbjct: 62 KWLLEGELNDEVIP 75 >UniRef50_B8EFW1 Putative phage repressor n=1 Tax=Shewanella baltica OS223 RepID=B8EFW1_SHEB2 Length = 209 Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 6/82 (7%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + +G+R++ RK TQ +A+ + +S V+VS+WE G S+P G+ L AL +L+ W Sbjct: 1 MKLGDRLKNTRKIKGLTQLQIAEGVGVSKVAVSRWELGYSQPKGEKLNALCNLLEIDSNW 60 Query: 66 ILFGDEDKQPTPPVEKPVALSP 87 +L G +D+ K VA+ P Sbjct: 61 LLTGLKDEC------KNVAMIP 76 >UniRef50_D2MI64 Prophage repressor n=2 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MI64_9BACT Length = 130 Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 5/83 (6%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTG-KNLFALSKVLQCSPTW 65 T+ ERIR R+ +Q +AKAL+IS +V+QWE+G ++ N FAL+ +L P W Sbjct: 3 TLTERIRSAREEAGLSQADVAKALRISASAVNQWEQGLTKNMKLNNFFALANLLGQDPRW 62 Query: 66 ILFGDEDKQPTPPVEKPVALSPK 88 + G + V++P +SPK Sbjct: 63 LATGKMLSR----VQEPAVISPK 81 >UniRef50_Q044U1 Transcriptional regulator, xre family n=4 Tax=root RepID=Q044U1_LACGA Length = 115 Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 11/103 (10%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 IG+RIR R + + +Q L+K L +S ++++WE G +EP+ L L++ S ++L Sbjct: 5 IGDRIRELRTSHRLSQTELSKLLHVSQQTITKWENGKAEPSSGALAKLAEYFDVSADYLL 64 Query: 68 FGDEDKQP-TPPVEK-PVALSPKELELLELFNALPESEQDTQL 108 D+ +P + +EK PV LS + P SE+D + Sbjct: 65 GSDKTSEPKSVDLEKDPVVLS---------YGGRPVSEEDMDV 98 >UniRef50_C9XPP6 Putative phage regulatory protein n=5 Tax=Clostridium difficile RepID=C9XPP6_CLODC Length = 135 Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 6/102 (5%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 T+G+RI Y R + K TQR L LK ++ ++E GD +P L +++ + W+ Sbjct: 6 TLGKRIAYLRNSKKLTQRKLMDILKFE--NLGKYETGDRKPNCDILMSIADYFNVTTDWL 63 Query: 67 LFGDEDKQPTPPV----EKPVALSPKELELLELFNALPESEQ 104 L+G E V E + ++ E+ +L L+ L E ++ Sbjct: 64 LYGKEKVNVNSSVKEDKEDYLHVTNDEMMILNLYRQLNERDK 105 >UniRef50_D2U1N5 Phage transcriptional regulator n=1 Tax=Arsenophonus nasoniae RepID=D2U1N5_9ENTR Length = 131 Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 2/126 (1%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVL--QCSP 63 + +G RIR RK T LA A+ ++S+ ER + L ++ L Q + Sbjct: 1 MNVGTRIRELRKKKGMTILQLATAINSDVGNISRLERNKQGYSENTLLKIASALGVQVAD 60 Query: 64 TWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFE 123 ++ + + +K L ++ELLEL+++LPE E + EMR R ++ +F Sbjct: 61 LFLDSSETNNASRNNKQKYSNLKSDQIELLELYDSLPEEEAKRFIKEMRDRKTHYELIFN 120 Query: 124 ELLKAR 129 E+LK R Sbjct: 121 EMLKKR 126 >UniRef50_A9L6K9 Putative phage repressor n=1 Tax=Shewanella baltica OS195 RepID=A9L6K9_SHEB9 Length = 214 Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 22/63 (34%), Positives = 40/63 (63%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 + RI+ +RK L Q+ +AK + ++ ++S WER + P+G+ L L+ VL+ + W+L Sbjct: 4 LSNRIKTKRKILGLKQKDVAKLMDVTSQAISSWEREVTNPSGELLLKLANVLKVNEGWLL 63 Query: 68 FGD 70 +GD Sbjct: 64 YGD 66 >UniRef50_B4RHZ2 Transcriptional regulator, Cro/CI family n=2 Tax=Phenylobacterium zucineum HLK1 RepID=B4RHZ2_PHEZH Length = 171 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 42/68 (61%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 ++ +G R+R RRK L TQ+SLA+AL ++ V ++ERG + + LF +S+VL+ + Sbjct: 27 DVHVGLRVRLRRKALGLTQQSLAEALDLTFQQVQKYERGANRISASTLFRISQVLEVPVS 86 Query: 65 WILFGDED 72 + G D Sbjct: 87 YFFDGLHD 94 >UniRef50_D2U4K8 Phage transcriptional regulator n=1 Tax=Arsenophonus nasoniae RepID=D2U4K8_9ENTR Length = 152 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 35/126 (27%), Positives = 64/126 (50%), Gaps = 11/126 (8%) Query: 15 RRKNLKHTQRSLAKALKI-SHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI------- 66 +++ L TQ A+ L + +VSQ+ G + +K+L SP I Sbjct: 22 KKEALSLTQEKAAEELGFNTQGAVSQYLNGKVPLNTDTIIKFAKILHVSPEAIKPELSSL 81 Query: 67 --LFGDEDKQPTPPVEKP-VALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFE 123 + D P ++P ++++ +EL LL+L N LPESEQ + ++ + + +++LFE Sbjct: 82 LKYVRETDSDSNTPTQQPEISITNRELALLKLINQLPESEQTSLHESLQEKKRYYDRLFE 141 Query: 124 ELLKAR 129 E+ KA+ Sbjct: 142 EIAKAK 147 >UniRef50_Q8DUT3 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=Q8DUT3_STRMU Length = 296 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/66 (40%), Positives = 36/66 (54%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +T R+R RK L +Q LA+ L IS ++++WE G P NL ALS Q S Sbjct: 3 MTFETRLRDYRKQLGLSQEKLAEELHISRQAITKWESGAGTPDVVNLMALSDFFQVSIDQ 62 Query: 66 ILFGDE 71 +LFG E Sbjct: 63 LLFGKE 68 >UniRef50_B0SUT7 Transcriptional regulator, XRE family n=5 Tax=Alphaproteobacteria RepID=B0SUT7_CAUSK Length = 145 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 10/102 (9%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 +L +G R+R RRK L +Q LA +L ++ V ++ERG + + L+ ++K LQ + Sbjct: 14 DLHVGGRVRMRRKLLGVSQEQLADSLGLTFQQVQKYERGANRVSASKLYEIAKTLQVPVS 73 Query: 65 WILFG----------DEDKQPTPPVEKPVALSPKELELLELF 96 + G DE Q + + +P+ LEL E+F Sbjct: 74 FFFDGLADPMDGSENDEIGQQAERIVQEFLTTPEGLELAEVF 115 >UniRef50_B0UWI4 Putative phage repressor n=1 Tax=Haemophilus somnus 2336 RepID=B0UWI4_HAES2 Length = 235 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 1/79 (1%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 N IG RIR +R+ L T+ LAKA+ +S ++ WE + EP + ++ L +P Sbjct: 8 NSLIGNRIREQRERLNLTRPELAKAVDVSLSALQGWEMNEREPQASMIITIANELGVTPN 67 Query: 65 WILFGDEDKQPTPPVEKPV 83 ++L G+ D QP +E+ V Sbjct: 68 YLLTGEND-QPKKTIERAV 85 >UniRef50_Q2JQC4 Putative DNA-binding protein n=1 Tax=Synechococcus sp. JA-3-3Ab RepID=Q2JQC4_SYNJA Length = 108 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 5/69 (7%) Query: 8 IGERIRYRRKNLKHTQRSLAK-----ALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 IGER+R+ R+ L+ TQ LA +++ +V + Q E+G K L A +K L S Sbjct: 37 IGERVRWVREKLQLTQDQLAGRLAKYGVQLDYVKIGQVEKGKRRVIDKELVAFAKALGVS 96 Query: 63 PTWILFGDE 71 TW+L GDE Sbjct: 97 VTWLLSGDE 105 >UniRef50_Q97IR2 Predicted transcriptional regulator n=1 Tax=Clostridium acetobutylicum RepID=Q97IR2_CLOAB Length = 110 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 39/62 (62%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 IG+RIR RK+ +TQ +LA+ L +S V VS+ E G ++ + L + K L +P++IL Sbjct: 8 IGDRIRNSRKSKNYTQENLAEYLDVSTVYVSKIECGKTKINLETLMKICKFLNITPSYIL 67 Query: 68 FG 69 G Sbjct: 68 TG 69 >UniRef50_Q1YI68 Putative transcriptional regulator n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YI68_MOBAS Length = 167 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 26/69 (37%), Positives = 36/69 (52%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M+ T+G RI+ R++L T LA L + ++ WER SEP L LS +L Sbjct: 54 MQMDGDTMGGRIQRGRESLGITTAELAARLGVKPETMRGWERDRSEPRANRLITLSGILG 113 Query: 61 CSPTWILFG 69 SP W+L G Sbjct: 114 VSPAWLLGG 122 >UniRef50_A5W7Z5 Putative phage repressor n=1 Tax=Pseudomonas putida F1 RepID=A5W7Z5_PSEP1 Length = 273 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 2/77 (2%) Query: 10 ERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFG 69 +R+ R K L + L+K +S +VS W G + GKNL AL+K L+CS W+ Sbjct: 5 DRVIARMKELNLSSTDLSKLSGVSKATVSFWINGTNGAKGKNLLALAKALECSAEWL--S 62 Query: 70 DEDKQPTPPVEKPVALS 86 D QPT VA S Sbjct: 63 DGTGQPTDENSPSVAAS 79 >UniRef50_Q2JNL0 Conserved domain protein n=1 Tax=Synechococcus sp. JA-2-3B'a(2-13) RepID=Q2JNL0_SYNJB Length = 132 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 5/69 (7%) Query: 8 IGERIRYRRKNLKHTQRSLAK-----ALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 IGER+R+ R+ L+ TQ LA +++ +V + Q E+G K L A +K L S Sbjct: 61 IGERVRWVREKLQLTQDQLAGRLAKYGVQLDYVKIGQVEKGKRRVIDKELVAFAKALGVS 120 Query: 63 PTWILFGDE 71 TW+L GDE Sbjct: 121 VTWLLSGDE 129 >UniRef50_Q6UAU6 Gp36 n=2 Tax=Siphoviridae RepID=Q6UAU6_9CAUD Length = 202 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 41/73 (56%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 T GER++ RR LK T + +A+++ IS V ERGD P+ + AL+K L+ WI Sbjct: 7 TRGERLKARRLELKMTLKQVAESVGISLPGVQNLERGDVMPSLEIGLALAKCLRMPVQWI 66 Query: 67 LFGDEDKQPTPPV 79 L+G E PV Sbjct: 67 LYGTESDPDRVPV 79 >UniRef50_C7HWC9 Transcriptional regulator n=2 Tax=Anaerococcus RepID=C7HWC9_9FIRM Length = 166 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 36/59 (61%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 IG++I+ +RK L TQ LAK L IS +VS+WE+ SEP+ NL LS++ + Sbjct: 1 MIGQKIKNKRKELNLTQEYLAKELNISRQAVSKWEKEISEPSMDNLIKLSEIFGVDIGY 59 >UniRef50_A0RLU0 Transcriptional regulator n=7 Tax=Bacillus RepID=A0RLU0_BACAH Length = 116 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 2/97 (2%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 IGE+I+ RKN K TQ L A+ +S +++S +E+G P ++L ++ + ++L Sbjct: 2 IGEKIKELRKNSKMTQEQLGDAIGVSKMAISYFEKGKKSPGRESLEKIADYFGVTTDYLL 61 Query: 68 FGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQ 104 ED + +K V+ K +L + +LPE E+ Sbjct: 62 GRSEDPELNEEEDKTVSEEGK--NILAIIESLPEDER 96 >UniRef50_Q2Y8T7 Transcriptional regulator, XRE family n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y8T7_NITMU Length = 189 Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 41/78 (52%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M + I IR R+ LK Q LA+ + +S +V QWE G ++P GK L +++VL+ Sbjct: 1 MYYDGMDIARIIREGREKLKLNQSELAELVGVSPQAVQQWESGATQPRGKRLNKIAEVLK 60 Query: 61 CSPTWILFGDEDKQPTPP 78 P + FG + P P Sbjct: 61 LPPAMMHFGMSLEVPAAP 78 >UniRef50_B6ET56 Putative peptidase, S24-like n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6ET56_ALISL Length = 205 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 40/73 (54%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 TIGERI+ R N +Q SLA+ + ++ ++SQWE G ++P KNL ++ + ++ Sbjct: 3 TIGERIKSLRLNQGLSQESLAEKINVTKSTISQWEVGKAQPKNKNLLSIVTFFDTTYEYL 62 Query: 67 LFGDEDKQPTPPV 79 G E P V Sbjct: 63 KGGGEIDDRCPRV 75 >UniRef50_A9IYM2 Transcriptional regulator n=1 Tax=Bartonella tribocorum CIP 105476 RepID=A9IYM2_BART1 Length = 82 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Query: 1 METKNLTI----GERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALS 56 M+ NL I G++IR RR+ LK +Q +L AL IS + ++E+G + + L +S Sbjct: 1 MQINNLNIDLFVGKKIRLRRQMLKMSQTTLGNALGISFQQIQKYEKGLNRVSAGRLMEIS 60 Query: 57 KVLQCSPTWILFGDEDKQPTPP 78 +L ++ L G K PP Sbjct: 61 DILTVPISFFLCGYHAKTTAPP 82 >UniRef50_Q5LR46 DNA-binding protein, putative n=1 Tax=Ruegeria pomeroyi RepID=Q5LR46_SILPO Length = 134 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 30/119 (25%), Positives = 63/119 (52%), Gaps = 7/119 (5%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M+T + +G RIR RR L +Q L +A+ + V ++E G + + L+A+++VL Sbjct: 1 MDTVDTVVGRRIRARRSALGLSQAELGRAVGVRFQQVQKYESGANRVSASRLWAIAEVLD 60 Query: 61 CSPTWILFGDED------KQPTPPVEKPVALSPKE-LELLELFNALPESEQDTQLAEMR 112 + G + PV++ + L ++ +E++E++++LP +++ LA +R Sbjct: 61 VHISHFFEGIQAPDSGVIDGSDAPVDRLMFLQDRDSVEMVEIYSSLPPAQKRAVLAFVR 119 >UniRef50_Q896S6 Putative transcriptional regulator n=1 Tax=Clostridium tetani RepID=Q896S6_CLOTE Length = 126 Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 36/66 (54%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + I ER++ RK ++Q LA L +S ++S+WE G S P N+ LS + S + Sbjct: 1 MEISERLQQLRKLANYSQEQLADMLGVSRQAISKWESGQSNPDISNVIKLSGIYNVSTDY 60 Query: 66 ILFGDE 71 IL G E Sbjct: 61 ILIGKE 66 >UniRef50_C4ZER3 Putative uncharacterized protein n=4 Tax=Firmicutes RepID=C4ZER3_EUBR3 Length = 123 Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 36/56 (64%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 ++GE ++ R K TQ +A+ + +S +VS+WE G S+P+ NLFAL+K+ S Sbjct: 59 SLGEALKVHRTQCKMTQEFVAETIGVSRQAVSKWENGTSDPSTSNLFALAKLYGIS 114 >UniRef50_B7LNL7 Repressor protein C2 n=5 Tax=Enterobacteriaceae RepID=B7LNL7_ESCF3 Length = 208 Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 38/65 (58%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 T+G+RI+ R+ + +Q+ L K +S V+V WE+ + P G+ L L+K S +I Sbjct: 3 TVGQRIKALRRVTRTSQKELGKFCGVSDVAVGYWEKDINVPGGEALSKLAKFFNTSIDYI 62 Query: 67 LFGDE 71 L+G E Sbjct: 63 LYGAE 67 >UniRef50_D1PI87 Toxin-antitoxin system, antitoxin component, Xre family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PI87_9FIRM Length = 116 Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 37/57 (64%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSP 63 T+GE +R R + + TQ +A++L +S +VS+WE G S+P+ NL AL+++ P Sbjct: 52 TLGEVLRQHRTDCRMTQEFVAESLGVSRQAVSKWESGKSDPSTTNLMALARLYGLPP 108 >UniRef50_Q1NQ27 Helix-turn-helix motif n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NQ27_9DELT Length = 109 Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 38/62 (61%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + +G+RIR RR+ L +QR LA L I+ ++ +WERG++ P + L L +L+ W Sbjct: 1 MNVGQRIRSRRQVLGLSQRELAARLGITFQAIQRWERGETFPRKETLPQLLAILEVGADW 60 Query: 66 IL 67 ++ Sbjct: 61 LV 62 >UniRef50_A8VQI9 Putative transcriptional regulator, XRE family n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VQI9_9BACI Length = 210 Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 49/92 (53%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + +G I RRK L +Q +A+ + +S +VS+WE G S P+ +L L++VL C Sbjct: 1 MALGTTISQRRKELNLSQAFVAEEMGVSRQAVSKWETGQSVPSTAHLIRLAEVLGCDVQD 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFN 97 + D++ QP P E+ + ++L +F Sbjct: 61 LAEPDQEAQPAQPAEESGSKKDIRMQLAAVFG 92 >UniRef50_B0SWF3 Transcriptional regulator, XRE family n=2 Tax=Caulobacter sp. K31 RepID=B0SWF3_CAUSK Length = 149 Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 12/117 (10%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 ++ +G R+R RRK L +Q LA ++ I+ + ++ERG + + L+ ++ LQ S + Sbjct: 11 DIHVGARVRMRRKALGLSQTQLADSVGITFQQLQKYERGANRVSASKLYGMAVTLQTSVS 70 Query: 65 WILFGDEDKQPTPPVEKPV------------ALSPKELELLELFNALPESEQDTQLA 109 W G E+ + LS + LEL LF +P +++ LA Sbjct: 71 WFFQGLSAVDVANATEEQMLEEHRLKGLQRFLLSSEGLELASLFPQIPPTQRQQLLA 127 >UniRef50_C6RPZ5 Peptidase S24-like domain protein n=2 Tax=Acinetobacter radioresistens RepID=C6RPZ5_ACIRA Length = 234 Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 37/63 (58%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 + ERI R K L Q L A + S +VS+W G + P+GK++ L+K L+ +P WIL Sbjct: 4 VSERILLRMKQLNLQQVDLIAATESSKGTVSKWISGVNMPSGKSIIPLAKALKTTPEWIL 63 Query: 68 FGD 70 G+ Sbjct: 64 TGE 66 >UniRef50_B9QVC7 Bacteriophage CI repressor protein, putative n=2 Tax=Labrenzia RepID=B9QVC7_9RHOB Length = 147 Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 4/77 (5%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 + + T+GERI R + LA+ L I ++ WE SEP L L+ +L S Sbjct: 36 SSDYTLGERICKARDIAGLSTAQLARRLGIKTSTLQSWESDRSEPRSNKLILLAGILNVS 95 Query: 63 PTWILFGDEDKQPTPPV 79 PTW+L G + +PPV Sbjct: 96 PTWLLVG----RGSPPV 108 >UniRef50_D0Z3D3 Phage repressor n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z3D3_LISDA Length = 238 Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 8/72 (11%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKA-------LKISHVSVSQWERG-DSEPTGKNLFALSK 57 +T+G+RI+ RR+ L+ TQ LA+ +K S VS+S E G + K L ALS Sbjct: 14 MTLGDRIKERRQALELTQEELAQKVAKIVTDMKFSRVSLSNIELGVQNSVKDKVLLALSN 73 Query: 58 VLQCSPTWILFG 69 L+C+P W+++G Sbjct: 74 FLKCTPEWLVYG 85 >UniRef50_C8WMU4 Transcriptional regulator, XRE family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WMU4_EGGLE Length = 64 Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 20/43 (46%), Positives = 28/43 (65%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPT 48 +T GE ++Y RK L TQ LAKAL +S +V++WE G P+ Sbjct: 1 MTFGEMVKYARKQLSMTQTELAKALGVSFATVNRWENGQVNPS 43 >UniRef50_C4G5J1 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G5J1_ABIDE Length = 115 Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 3/111 (2%) Query: 1 METKNLT-IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVL 59 M+ NL IG+RIR R K TQ L++ L + +++ E+G+ T + LS + Sbjct: 1 MDMMNLVEIGKRIRSLRYESKLTQTKLSEYLSLDQSMIAKIEKGERNITSDVIEKLSALF 60 Query: 60 QCSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFN--ALPESEQDTQL 108 C+ ++LFG+ +Q + L+ +L+ L + N L + E D L Sbjct: 61 CCTVDYLLFGENQEQKCTVSFRTNNLTSDDLKALAIINKIVLNQFEMDKML 111 >UniRef50_B9WVI7 Transcriptional regulator, XRE family n=1 Tax=Streptococcus suis 89/1591 RepID=B9WVI7_STRSU Length = 126 Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 10/119 (8%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKI-SHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 +G+RIR R+ Q +A L S ++S+WE G + PTGK L L+++L S +I Sbjct: 11 VGQRIRELREMRGFEQLDIANQLGYKSQSTISKWESGVNLPTGKKLILLAEMLDTSTDYI 70 Query: 67 LFG---DEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAE--MRARVKNFNK 120 L G D + T P ++ + + ++ +P +++D L + R+KN +K Sbjct: 71 LHGKISDTSTKDTTPTIDFKEMAAESMS----YDGMPLNDEDIDLIASILETRMKNRDK 125 >UniRef50_C6LAG2 DNA-binding protein n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LAG2_9FIRM Length = 421 Score = 48.5 bits (114), Expect = 7e-05, Method: Composition-based stats. Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 ME K T G + RRK L TQ+ A L ++ +VS+WERG S P + ++ VL+ Sbjct: 8 MENKK-TFGAFVLRRRKELGMTQKEFAARLYVTESAVSKWERGMSYPDITLIRSICSVLE 66 Query: 61 CSPTWILFGDEDKQ 74 S +L G ED + Sbjct: 67 VSEHELLTGSEDTE 80 >UniRef50_B2N7G8 Helix-turn-helix domain protein n=1 Tax=Escherichia coli 53638 RepID=B2N7G8_ECOLX Length = 164 Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 5/71 (7%) Query: 12 IRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFGDE 71 +R +R+ T LA+ L + + QWE G+ EPT L L+ +L C P W+L G Sbjct: 87 LRTQREACGLTTAELARLLDLDEEIIIQWESGEYEPTISMLIPLANILGCDPMWLLTG-- 144 Query: 72 DKQPTPPVEKP 82 + TPP E+P Sbjct: 145 --EVTPP-EQP 152 >UniRef50_C3LHJ4 Prophage LambdaBa02, repressor protein n=12 Tax=Bacillus cereus group RepID=C3LHJ4_BACAC Length = 122 Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 10/116 (8%) Query: 8 IGERIRYRRKNLKHTQRSLAKALK--------ISHVSVSQWERGDSEPTGKNLFALSKVL 59 +G+RI+ RK TQ +LA +K ++ ++S +E G S P+ + L +S VL Sbjct: 4 LGQRIKLSRKKRGLTQDALALKIKEKMDTETKVTKTTISNYETGYSSPSNETLVIISDVL 63 Query: 60 QCSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARV 115 S ++L +D P + L + EL+++ +P+ +QD L M+A V Sbjct: 64 NVSVDYLLGRSDD--PELNAVQFTELRKEFNELIDMLEKMPKEKQDMLLDMMKAAV 117 >UniRef50_B8GUZ2 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GUZ2_THISH Length = 118 Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 6/107 (5%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 TI R R R L +Q +A + V +WERG + P G+ L A + +I Sbjct: 7 TISSRFREERVRLGLSQAEVAGICGVRREIVGRWERGINAPGGEALAAFG-MHGADLHYI 65 Query: 67 LFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRA 113 L G + P +PV L P ELEL+ L+ L E ++ A++RA Sbjct: 66 LTGRDKDAP-----QPVMLRPDELELVLLWRDLTEEQRKGIRAQVRA 107 >UniRef50_A9KUS5 Transcriptional regulator, XRE family n=1 Tax=Shewanella baltica OS195 RepID=A9KUS5_SHEB9 Length = 204 Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + I ER+R RK L TQ LA + + S+ + ERGD++ +N+ AL+K LQ +P + Sbjct: 1 MDIAERVRKLRKALGMTQYQLADLVSTAQTSIQKLERGDTK-NPRNIEALAKALQTTPEF 59 Query: 66 ILFGDED 72 + FG D Sbjct: 60 LRFGVGD 66 >UniRef50_C6PS92 Transcriptional regulator, XRE family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PS92_9CLOT Length = 120 Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 6/84 (7%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + I ER++ RK+ +++Q LA+ L ++ ++S+WE P N+ LS++ S + Sbjct: 1 MGISERLQKLRKDERYSQEQLAEKLGVTRQAISKWESNQGNPDINNIIKLSEIYNVSTDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKE 89 +L G+E + KP+ + KE Sbjct: 61 LLKGEEQ------ISKPIEIDSKE 78 >UniRef50_UPI000196C777 hypothetical protein CATMIT_02710 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196C777 Length = 126 Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 36/57 (63%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSP 63 ++GE ++ R K TQ +A+ L +S +VS+WE G S+P NL ALS++ + +P Sbjct: 55 SLGESLKENRLRCKMTQEFVAETLGVSRQAVSKWENGTSDPNTTNLIALSRLYKVTP 111 >UniRef50_UPI0001AF457F putative phage repressor n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF457F Length = 277 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 37/81 (45%) Query: 10 ERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFG 69 +R+ R K L +++ +S +VS W G + GKNL AL+K L+CSP W+ G Sbjct: 5 DRVSARMKALSLNATDISRLTGVSKATVSFWVSGTNGAKGKNLLALAKALKCSPDWLSEG 64 Query: 70 DEDKQPTPPVEKPVALSPKEL 90 E + EL Sbjct: 65 SGSAIDVTTTEPKFGSTSAEL 85 >UniRef50_Q1GFV0 Transcriptional regulator, XRE family n=8 Tax=Rhodobacteraceae RepID=Q1GFV0_SILST Length = 133 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 38/71 (53%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 T G+R+ R++ TQ LA+ + + ++ WE+ SEP L LS +L S +W+ Sbjct: 15 TFGDRVAAARESAGMTQGQLARRMGVKKSTLIGWEQDLSEPRANKLSTLSGILNVSMSWL 74 Query: 67 LFGDEDKQPTP 77 L G+ D+ P Sbjct: 75 LTGEGDELSAP 85 >UniRef50_A9IYN4 Transcriptional regulator n=14 Tax=Bartonella RepID=A9IYN4_BART1 Length = 157 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 6/109 (5%) Query: 1 METKNLTI----GERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALS 56 M+++NL I G++IR RR+ LK +Q +L AL +S + ++E+G + + L +S Sbjct: 37 MQSQNLNIDLLVGKKIRLRRQMLKMSQTTLGHALGVSFQQIQKYEKGLNRVSAGRLMQIS 96 Query: 57 KVLQCSPTWILFGD-EDKQPTPPVEKPVALSPKELELLELFNALPESEQ 104 +L P + D KQ P V S +E LL+ F L +Q Sbjct: 97 DILNV-PISFFYADIITKQQPPHHHDEVISSTEEYLLLKRFRTLTSIKQ 144 >UniRef50_Q2RSF5 Transcriptional regulator, XRE family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RSF5_RHORT Length = 196 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 45/81 (55%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + IG+RI RK+ +Q +LAK L ++ +++ +ERG + P + L+++L S + Sbjct: 2 IEIGKRIAEARKDQGMSQYALAKLLGVNQSTIAYYERGRNTPKPWIVEDLARILNVSAAF 61 Query: 66 ILFGDEDKQPTPPVEKPVALS 86 +L+G E P PV V L Sbjct: 62 LLYGRERTDPLVPVVGRVGLG 82 >UniRef50_B4TN93 Conserved domain protein n=5 Tax=Gammaproteobacteria RepID=B4TN93_SALSV Length = 71 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 TI +R++ +R LK TQ LA+ + S+ Q E G+++ + L L+ LQC P+W+ Sbjct: 3 TISQRLKQKRTELKMTQAQLAEKAGMKQQSIQQIESGETKRP-RFLLELATALQCDPSWL 61 Query: 67 LFG 69 L+G Sbjct: 62 LYG 64 >UniRef50_A8RI36 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RI36_9CLOT Length = 129 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 6/102 (5%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 T+GER+ Y RK +TQ SLA+ + +S + E+ +EP + A+ ++L + W+ Sbjct: 17 TLGERLNYARKQKGYTQDSLAQTIGVSRGVIFNLEKNKTEPQAIVINAVCQILNINKEWL 76 Query: 67 LFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQL 108 G D + + S K LE EL++ E +D QL Sbjct: 77 TDGTGDMESGNQAFQ----SAKLLE--ELYDIAKELSEDEQL 112 >UniRef50_B0T4G6 Transcriptional regulator, XRE family n=20 Tax=cellular organisms RepID=B0T4G6_CAUSK Length = 171 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 38/68 (55%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 +L +G R+R RRK L +Q LA AL ++ V ++ERG + + L+ ++K LQ + Sbjct: 42 DLHVGGRVRMRRKMLGISQEHLADALGLTFQQVQKYERGANRVSASKLYEIAKTLQVPVS 101 Query: 65 WILFGDED 72 + G D Sbjct: 102 YFFEGLAD 109 >UniRef50_A6U898 Helix-turn-helix domain protein n=3 Tax=Rhizobiaceae RepID=A6U898_SINMW Length = 130 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 22/63 (34%), Positives = 34/63 (53%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 T+G RI R + + LA L + + +++ WER +EP LF L+ VL SP W+ Sbjct: 20 TLGGRIWRARDATGLSTKELASKLGVRNDTIASWERDRAEPRANRLFMLAGVLGVSPAWL 79 Query: 67 LFG 69 + G Sbjct: 80 MAG 82 >UniRef50_B6GDK8 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GDK8_9ACTN Length = 125 Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 48/85 (56%), Gaps = 3/85 (3%) Query: 12 IRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFGDE 71 I+ RK ++ +Q A+ + +S +V WERG+S P+ + ++ + VL CSP IL D+ Sbjct: 5 IQQMRKKMRISQTEFAERIGVSLRTVGSWERGESVPSAEQIWNCAVVLGCSPNEILCWDD 64 Query: 72 DKQPTPPVEKPVALSPKELELLELF 96 ++ P + L+ +E E++ + Sbjct: 65 ER---PHEDSGEHLTSEEREIVGCY 86 >UniRef50_D0C932 Cro/CI family transcriptional regulator n=8 Tax=Acinetobacter baumannii RepID=D0C932_ACIBA Length = 250 Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 2/109 (1%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +++ RIR + + K LA+A K S V+ +W G S PT +NL ++K L S W Sbjct: 1 MSLHTRIRQKLEEKKLRAADLARATKKSPVAAKKWLDGTSVPTAENLKVIAKFLGVSDDW 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRAR 114 +L+G D+Q + L+ ++E + +P+SE + + A+ Sbjct: 61 LLYGGSDEQESS--NNLAQLNVIDIEAFKQKYNIPDSEDAVKFVQAPAK 107 >UniRef50_A8SPU8 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SPU8_9FIRM Length = 108 Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 7/88 (7%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 ++ IG+RI+Y RK++ TQ L + + +S+ E G S P+ K L LS+ L+C+ Sbjct: 7 VNSMIIGQRIKYARKSMNLTQEELGRLMCTDGKYISRLESGKSLPSLKRLVQLSRALKCT 66 Query: 63 PTWILF-------GDEDKQPTPPVEKPV 83 + L+ G ED V+ V Sbjct: 67 CDYFLWDMDVPETGSEDVDIEFDVDNAV 94 >UniRef50_C6QSQ4 Transcriptional regulator, XRE family n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QSQ4_9BACI Length = 148 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 42/71 (59%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 +G+R++Y R+ ++Q+ +A+A+ IS+V +S++E GD P + + A + + +IL Sbjct: 4 LGKRLKYLREKFNYSQKKVAEAIGISNVQLSRYESGDRNPDPELIAAFADFYGVTTDYIL 63 Query: 68 FGDEDKQPTPP 78 +D Q P Sbjct: 64 GRTDDPQGYAP 74 >UniRef50_C2KY20 Putative uncharacterized protein n=1 Tax=Oribacterium sinus F0268 RepID=C2KY20_9FIRM Length = 300 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 26/64 (40%), Positives = 36/64 (56%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 IG+ I +RKNL TQ+ LA+ + +S SVS+WERG P F L +L S L Sbjct: 6 IGKYISEKRKNLGMTQKQLAEKIGMSDKSVSKWERGICLPDVSLYFDLCSILGISINEFL 65 Query: 68 FGDE 71 G++ Sbjct: 66 AGED 69 >UniRef50_UPI0001C3512F putative transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C3512F Length = 365 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/60 (48%), Positives = 35/60 (58%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 +GERI Y RK K TQ LA+ L IS +VS+WE G S P L LS+VL S +L Sbjct: 32 MGERITYLRKRKKMTQAQLAEQLGISAQAVSKWESGLSCPDIMTLVPLSQVLGVSTDELL 91 >UniRef50_A8RQA3 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RQA3_9CLOT Length = 199 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 35/57 (61%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 + + E I+ RR +K +Q +A L IS +V++WE G SEPT KNL L+ + + S Sbjct: 1 MALSENIKARRTQIKMSQEYVADQLGISRQAVAKWEAGTSEPTSKNLSELASLFEMS 57 >UniRef50_A3CPI8 Transcriptional regulator, XRE family, putative n=1 Tax=Streptococcus sanguinis SK36 RepID=A3CPI8_STRSV Length = 197 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 40/65 (61%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + +G++I++ RK +Q LA+ + +S S+S WERG + P +NL LSKV + S Sbjct: 1 MQVGKQIQHYRKEKNLSQDDLAEIIFVSRQSISNWERGATYPDIQNLLLLSKVFEVSLDK 60 Query: 66 ILFGD 70 ++ GD Sbjct: 61 LVKGD 65 >UniRef50_C8WL34 Transcriptional regulator, XRE family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WL34_EGGLE Length = 380 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 41/68 (60%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 N+ I +R+ RRK +Q +LA L +S +VS+WER +S P NL AL+++ S Sbjct: 2 NVEIAQRLAERRKQAGLSQEALAARLGVSRQAVSKWERSESSPDTDNLIALAQLYGLSLD 61 Query: 65 WILFGDED 72 +L+ DE+ Sbjct: 62 DLLYVDEE 69 >UniRef50_B6AW67 Transcriptional regulator, XRE family n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6AW67_9RHOB Length = 133 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 10/127 (7%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M ++ IG RI+ RR LK +Q LA+A+ + V ++E G + + L +++ L Sbjct: 1 MTNIDVLIGARIKGRRIALKISQTKLAEAVGVRFQQVQKYESGANRVSASRLLMVAETLG 60 Query: 61 CSPTWILFG--------DEDKQPTPPVEKPV-ALSPKEL-ELLELFNALPESEQDTQLAE 110 ++ G D QP+ P+ ALS + E+L L LP+ +Q LA Sbjct: 61 VPISYFFQGLDNAGSADSTDVQPSARATAPMNALSDARVSEILALVETLPKEQQMAVLAF 120 Query: 111 MRARVKN 117 +R K Sbjct: 121 LRTLAKT 127 >UniRef50_A1TUL8 Putative phage repressor n=1 Tax=Acidovorax citrulli AAC00-1 RepID=A1TUL8_ACIAC Length = 248 Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 12/108 (11%) Query: 2 ETKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQC 61 +T +G+RIR R NL T+ A+ L++ +V ++ERG + P L +++V C Sbjct: 25 DTYASALGDRIRRCRGNL--TREEFARRLELHINTVGKFERGLTVPDAFVLLRMAEVGSC 82 Query: 62 SPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLA 109 W+L G+E PTP V PK + +E+ + + D QL+ Sbjct: 83 QVQWLLTGEE---PTPSV-------PKSIRAIEVGSYVFVPHFDVQLS 120 >UniRef50_Q5FQ46 Putative uncharacterized protein n=1 Tax=Gluconobacter oxydans RepID=Q5FQ46_GLUOX Length = 203 Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 10/97 (10%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 L +G RIR R+ +Q+ LA + IS +V+ WE G S GK+L +L++VL P Sbjct: 80 GLELGRRIRLLREMAGLSQQQLADKVGISRSAVAFWETGRSGHVGKHLGSLAQVLGVEPE 139 Query: 65 WILFGDEDK--QPTPPVEKPVALSPKELELLELFNAL 99 +L G K Q T L+P E +L L+ L Sbjct: 140 VLLTGMAYKAIQAT--------LTPDENTMLTLYRQL 168 >UniRef50_A9BRJ2 Transcriptional regulator, XRE family n=3 Tax=Comamonadaceae RepID=A9BRJ2_DELAS Length = 104 Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/99 (36%), Positives = 47/99 (47%), Gaps = 9/99 (9%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFA-LSKVLQCSPTWI 66 IGERIR RR L TQ LA+A I+ +VSQ E G + A ++ LQ + + Sbjct: 4 IGERIRARRAELGMTQGRLAEAAGITASAVSQIESGAIRTLKNDTLARVALALQTTALEL 63 Query: 67 LFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQD 105 G ED PV+ E LLE + ALP Q+ Sbjct: 64 TAGLEDDNAPLPVD--------EQRLLESYRALPAPLQE 94 >UniRef50_C9A4E1 Predicted protein n=3 Tax=Enterococcus casseliflavus RepID=C9A4E1_ENTCA Length = 207 Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 35/67 (52%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + IR RRK L TQ LAK L +S ++S WE G + P L L+++ Q S Sbjct: 1 MAFHQMIRERRKQLGMTQEELAKELNVSRSAISNWEIGRNYPDITTLIELAQMYQVSLDE 60 Query: 66 ILFGDED 72 + + D D Sbjct: 61 LFYDDID 67 >UniRef50_UPI0001693962 transcriptional regulator, XRE family protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001693962 Length = 151 Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 40/70 (57%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 ++IGERIR RRK L+ TQ +A+ LK+ + E G P+ +L ++ +LQ + + Sbjct: 1 MSIGERIRQRRKLLQITQLEIAEQLKMGRSNFGHIENGRVTPSSSDLQKIADILQTNADY 60 Query: 66 ILFGDEDKQP 75 +L +D P Sbjct: 61 LLGRTDDPSP 70 >UniRef50_B5Z300 Putative repressor protein encoded within prophage CP-933O n=16 Tax=Escherichia RepID=B5Z300_ECO5E Length = 212 Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 34/65 (52%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 TI ERI R L + L A S SVSQW G P+ + + +L+K+L+ + W+ Sbjct: 5 TISERITQRMHALNLKGKDLVNATGASKGSVSQWMNGGGAPSSRYISSLAKILKVNENWL 64 Query: 67 LFGDE 71 L G E Sbjct: 65 LNGGE 69 >UniRef50_C9AD53 Predicted protein n=1 Tax=Enterococcus casseliflavus EC20 RepID=C9AD53_ENTCA Length = 209 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 36/57 (63%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 L +G+ I+ R++ K TQ+SLAK L ++ +VS+WER +S P + L +LS S Sbjct: 2 LDLGKNIKELRQSKKMTQKSLAKMLNVTPQAVSKWERNESNPDIQTLISLSNYFNVS 58 >UniRef50_Q033H7 Transcriptional regulator, xre family n=4 Tax=Lactococcus lactis RepID=Q033H7_LACLS Length = 107 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 27/65 (41%), Positives = 35/65 (53%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + I E I+ RK +Q LAK L IS S+ +WE G S PT L LS++ CS Sbjct: 1 MEISEIIKENRKLKNLSQEELAKELHISRQSILKWETGKSLPTTDQLILLSEIFDCSLDT 60 Query: 66 ILFGD 70 +L GD Sbjct: 61 LLKGD 65 >UniRef50_Q6J1N3 Putative prophage repressor protein n=1 Tax=Burkholderia phage BcepC6B RepID=Q6J1N3_9CAUD Length = 244 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 27/63 (42%), Positives = 34/63 (53%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 IG RIR RK T + LA IS SVS+WE G S+P L L+K L + ++L Sbjct: 7 IGTRIRELRKAKGLTLQQLADVFGISRASVSEWESGRSKPDANKLVLLAKELHTAVEYLL 66 Query: 68 FGD 70 GD Sbjct: 67 NGD 69 >UniRef50_A2P378 Repressor protein C2 n=1 Tax=Vibrio cholerae 1587 RepID=A2P378_VIBCH Length = 225 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 16/91 (17%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALK-------ISHVSVSQWERGDSEPTGKNLF-ALSKV 58 T+G+R+ +RR LK TQ L +K + V+VS E + +N+F + +V Sbjct: 3 TLGKRVEWRRTQLKITQDELVTKVKKLLPDASFNRVTVSNIENEVQKSFKENVFLVVCRV 62 Query: 59 LQCSPTWILFGD---EDKQPT-----PPVEK 81 L+C P W+ FG EDK P PPVE+ Sbjct: 63 LKCRPDWLAFGTGPVEDKGPNIAQVGPPVEQ 93 >UniRef50_B8FWP9 Transcriptional regulator, XRE family n=2 Tax=Desulfitobacterium hafniense RepID=B8FWP9_DESHD Length = 140 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 8/104 (7%) Query: 7 TIGERIRYRRKNLKHTQRSLAKAL-KISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +G RI+ RKN K + L++ L IS ++ + E G+ P+ ++ +S S W Sbjct: 9 ALGTRIKQLRKNGKLSLADLSRHLPSISRANLGRIENGEVMPSAIFIYEISSFFNVSADW 68 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLA 109 +L G+ TP + P+ L+ + L+E+FN + EQ +A Sbjct: 69 LLTGN-----TPAL--PIYLNAEHERLIEMFNLMNGMEQQILMA 105 >UniRef50_A0YEC5 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YEC5_9GAMM Length = 107 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 5/96 (5%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +TI R++ R T + AK +S V W + P+ + +S+ L SP W Sbjct: 1 MTIDHRVKEIRNKHGLTHTAFAKIAGVSRQLVYNWYNQGTSPSADAVLRISRTLDISPYW 60 Query: 66 ILFGDED-----KQPTPPVEKPVALSPKELELLELF 96 L+G D Q E V LS + ELLE+F Sbjct: 61 FLYGKGDMYVVKGQQEKIAELLVDLSDADKELLEIF 96 >UniRef50_B3G141 Hypothetical bacteriophage protein n=1 Tax=Pseudomonas aeruginosa RepID=B3G141_PSEAE Length = 108 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 8/97 (8%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 +G+RIR R L + A+ L ++ +V++WE ++ P G +L L P WIL Sbjct: 1 MGDRIRQIRGGLGVGE--FAERLGVNRKTVARWESNEALPDGASLLTLHSCFGADPGWIL 58 Query: 68 FGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQ 104 G QP P L+P E LL+ + P Q Sbjct: 59 TGG-GAQP-----GPAELAPDERILLDNYRHSPPDAQ 89 >UniRef50_Q1WSI6 DNA-binding protein n=3 Tax=Lactobacillus salivarius RepID=Q1WSI6_LACS1 Length = 203 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 39/64 (60%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 IG+ I RRK+L TQ +LAK L I+ +VS+WE G S P + L ++L+ + +L Sbjct: 6 IGKFIAKRRKDLHFTQANLAKKLGITDRAVSKWENGKSIPDASLMLDLCQLLEINVNELL 65 Query: 68 FGDE 71 G++ Sbjct: 66 TGEQ 69 >UniRef50_C8T7G4 HTH-type transcriptional regulator RdgA n=1 Tax=Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884 RepID=C8T7G4_KLEPR Length = 70 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 7/72 (9%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERG-DSEPTGKNLFALSKVLQCSPT 64 +T+ R++ RRK L TQ +LA+ +S ++++ E G S P + L +S LQC P Sbjct: 1 MTLATRVKERRKELNMTQVALAELTGVSQQAINRIESGVISRP--RYLLEISAALQCDPN 58 Query: 65 WILFGDEDKQPT 76 W+L G QPT Sbjct: 59 WLLHG----QPT 66 >UniRef50_B4W911 Helix-turn-helix domain protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W911_9CAUL Length = 117 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 16/106 (15%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 ++ IG RIR RR+ L+ TQ LA ++ + ++ERG + + L ++ VL+ + Sbjct: 9 DIAIGARIRARREELRITQAQLAAGAGVTFQQIQKYERGVNRVSAARLLQIAAVLKSTGA 68 Query: 65 WILF------GDEDKQPTPPVEKPVALSPKELELLELFNALPESEQ 104 +L GDE P V ELL F ++ ++E+ Sbjct: 69 ALLGELETAEGDELALAAPGVA----------ELLSAFRSIRDAEK 104 >UniRef50_A9YWX7 Putative repressor n=3 Tax=root RepID=A9YWX7_9CAUD Length = 118 Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 1/68 (1%) Query: 4 KNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSP 63 +N G R + RR+ L +Q+ +A+ + +S ++++ ERG S T N FAL++ L + Sbjct: 5 ENPEFGRRAKERREALGLSQKHVAELVGVSQPAIAKVERGGSTTT-TNGFALARALLTTL 63 Query: 64 TWILFGDE 71 W+ FGDE Sbjct: 64 EWLEFGDE 71 >UniRef50_Q5L2Q2 Transcriptional regulator n=3 Tax=Geobacillus kaustophilus RepID=Q5L2Q2_GEOKA Length = 125 Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 2/96 (2%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 +G+R+R R+ K TQ L K + ++ VS+S +E G+ P + L L+ + ++ Sbjct: 6 VLGDRLRKLRQEKKLTQEELGKKINVTKVSISGYENGNRTPDTETLQKLADFFNVTTDYL 65 Query: 67 LFGDEDKQPTPPVEKPVALSPKELELLELFNALPES 102 L G D P PP + + K+ EL F L E+ Sbjct: 66 L-GRTD-HPNPPDQDDIPEELKDPELGLFFKELAEA 99 >UniRef50_B3IRK9 Helix-turn-helix domain protein n=2 Tax=Escherichia coli RepID=B3IRK9_ECOLX Length = 136 Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 3/73 (4%) Query: 4 KNLTIGE--RIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQC 61 +NL I RIR +R+ T LA+ L + + QWE G+ EPT L L+ VL C Sbjct: 60 QNLAINSQNRIRTQRETCGLTTAELARLLDLDEEIIIQWESGEYEPTISMLIPLANVLGC 119 Query: 62 SPTWILFGDEDKQ 74 P +L D KQ Sbjct: 120 DP-MLLLTDAYKQ 131 >UniRef50_B2PWM7 Putative uncharacterized protein n=2 Tax=Providencia RepID=B2PWM7_PROST Length = 100 Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 1/71 (1%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M+ N +G+ IR RRK L + LA + IS VS++ERG+ T NL +L+K L+ Sbjct: 1 MKNVNQIVGKEIRKRRKELGLSGAELAGLVGISQQQVSRYERGECNITLDNLLSLAKALE 60 Query: 61 CSPTWILFGDE 71 + F DE Sbjct: 61 -TDLICFFNDE 70 >UniRef50_C2Q4Y2 Putative uncharacterized protein n=1 Tax=Bacillus cereus AH621 RepID=C2Q4Y2_BACCE Length = 163 Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 35/61 (57%) Query: 9 GERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILF 68 G+RI+ R TQ+ LAK + ++ VS WER + P ++L +SK+ Q + +IL Sbjct: 9 GKRIKELRNIKNWTQKELAKNIDVTSQVVSNWEREYTSPNHEDLLKMSKLFQVTTDYILL 68 Query: 69 G 69 G Sbjct: 69 G 69 >UniRef50_B0NKE5 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=B0NKE5_EUBSP Length = 476 Score = 45.8 bits (107), Expect = 4e-04, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 39/62 (62%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 ME +++G+ I RRK+ +Q +A + +S +VS+WE+ S P+ +N+ L+++L+ Sbjct: 1 MEVSRMSLGKNIASRRKSQNFSQEDIATLVGVSRQAVSKWEKDLSSPSTENIIRLAEILR 60 Query: 61 CS 62 S Sbjct: 61 VS 62 >UniRef50_O48389 Repressor n=1 Tax=Streptococcus phage TP-J34 RepID=O48389_9CAUD Length = 121 Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Query: 9 GERIRYRRKNLKHTQRSLAKALKI-SHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 G RI R + +Q LAK L S ++S+WE G S PTG + L++ L + +IL Sbjct: 8 GSRIESLRASKGISQLELAKMLGYKSDSTISKWESGASIPTGTKIVKLAQALGTTTDYIL 67 Query: 68 FGD 70 FGD Sbjct: 68 FGD 70 >UniRef50_D0ZTD0 Regulatory protein n=8 Tax=root RepID=D0ZTD0_SALT1 Length = 136 Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 1/80 (1%) Query: 26 LAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFGDEDKQPTPPVE-KPVA 84 L++ + +SH SV +W G S +G+ L LS V W D+ E KP Sbjct: 27 LSRRVMLSHTSVRKWASGTSVASGERLKRLSAVTGRPEYWFFMEPGDESEGERAEPKPRV 86 Query: 85 LSPKELELLELFNALPESEQ 104 L KE LL LFN LPE+E+ Sbjct: 87 LDEKEETLLSLFNQLPEAEK 106 >UniRef50_C7WFT7 Predicted protein n=22 Tax=Enterococcus faecalis RepID=C7WFT7_ENTFA Length = 269 Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 1/67 (1%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVS-VSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 +G R+R RK K+T R LA + +S S +S WE G + P + L ++K + W+ Sbjct: 45 VGARMREARKKKKYTLRYLANKIGLSSGSTISNWELGLNLPNKRYLKKIAKACDTTVDWL 104 Query: 67 LFGDEDK 73 L+GD D+ Sbjct: 105 LYGDFDR 111 >UniRef50_Q4L9W0 Similar to unknown protein n=4 Tax=Staphylococcus RepID=Q4L9W0_STAHJ Length = 134 Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 2/71 (2%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M+TK ++GERIR RK+ K +Q LA+ L +S S+S WER S P L ++++ Sbjct: 1 MKTK--SVGERIRNLRKSKKMSQEKLAEKLNVSRHSISNWERDVSSPDIHALLEMTELFG 58 Query: 61 CSPTWILFGDE 71 S ++ GDE Sbjct: 59 VSLNHLVKGDE 69 >UniRef50_C0BZ66 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BZ66_9CLOT Length = 323 Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 1/69 (1%) Query: 2 ETKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQC 61 ETK + E +++ R+ +TQ +A+ L++S SVS+WE G S P L LS++ QC Sbjct: 4 ETK-MGFAENLQFLRQKKGYTQEQIAEQLQVSRQSVSKWESGGSFPEMDKLLQLSEMFQC 62 Query: 62 SPTWILFGD 70 ++ GD Sbjct: 63 GMDVLVQGD 71 >UniRef50_B4EYH8 Fimbrial operon regulator n=2 Tax=Proteus mirabilis RepID=B4EYH8_PROMH Length = 105 Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 41/66 (62%) Query: 2 ETKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQC 61 +T N IG+RIR+ RKNLK++ + AK L IS +S++ERG + + + ++ +++ Sbjct: 6 KTINFRIGQRIRHLRKNLKYSGKLFAKELGISQQQLSRYERGTNRISIEFVYLITEKFDV 65 Query: 62 SPTWIL 67 ++ L Sbjct: 66 HISYFL 71 >UniRef50_C3DY68 Helix-turn-helix domain protein n=1 Tax=Bacillus thuringiensis serovar pakistani str. T13001 RepID=C3DY68_BACTU Length = 117 Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 53/99 (53%), Gaps = 2/99 (2%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +T+GER+R R+ +TQ + + L+I ++S +E G +P L L+ + + S + Sbjct: 1 MTLGERLRTCREKSGYTQTYITEKLEIHRGTLSSYESGRRKPDYDTLSKLADIYKVSVDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQ 104 +L DK+ T +K + +++E EL + L + EQ Sbjct: 61 LLGRSTDKRLTAEQDKQATVMGRKIE--ELISNLSKEEQ 97 >UniRef50_Q2RLS7 Transcriptional regulator, XRE family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RLS7_MOOTA Length = 128 Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 47/97 (48%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 ++IG+RI+ R+ + TQ LA+ ++IS +++ +E G EP G+ L +K L S + Sbjct: 1 MSIGKRIKELREKIGLTQEELAERVQISRSALANYESGYREPKGEILVRFAKALNTSTDF 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPES 102 +L + T K L L L N PE Sbjct: 61 LLGNEVKVDKTNDKTKKYELDEATLLFARLSNLTPEG 97 >UniRef50_C8TM97 Predicted phage repressor protein n=15 Tax=Escherichia coli RepID=C8TM97_ECO26 Length = 133 Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 5/111 (4%) Query: 22 TQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFGDEDKQP--TPPV 79 +Q LA+ + ++ +V QW G + P +L L +V W L E+ + TP Sbjct: 22 SQAELARRIGVTQQTVQQWVSGKATPKASSLDKLVEVSGHPLHWFLLPPEECEQIFTPDT 81 Query: 80 EKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEELLKARQ 130 K + P++ ELL+ F+A PE +Q+ L E++ + K+ + L A++ Sbjct: 82 MK---IGPRQRELLQAFSAFPEEDQEKMLQEIKDKKKSMEETIARWLAAQK 129 >UniRef50_A8RWL6 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RWL6_9CLOT Length = 185 Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 39/62 (62%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +T GE++++ RK +Q L++ L +S ++S+WE G+S P +N+ LSK+ S + Sbjct: 1 MTFGEKLKFLRKQKGFSQERLSQQLTVSRQAISKWELGESLPDTENVIQLSKLFSVSIDF 60 Query: 66 IL 67 +L Sbjct: 61 LL 62 >UniRef50_C9BLS2 Helix-turn-helix domain-containing protein n=6 Tax=Enterococcus faecium RepID=C9BLS2_ENTFC Length = 270 Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 24/129 (18%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKAL-KISHVSVSQWERGDSEPTGKNLFALSKVL 59 ME +G RIR R+ LK + K + + +V+ WERG + P + L ++++ Sbjct: 1 MEIDKQAVGNRIRQIRQELKLSMEKFGKLIGDLPRSTVNNWERGINLPKTETLHQIAEIG 60 Query: 60 QCSPTWILFGDEDKQPT------------PPVEKPVA--------LSPKELE-LLELF-- 96 + ++L+GD++ Q P +E + +S KE++ ++E F Sbjct: 61 HVTNEYLLYGDQENQYILEMLQKKAGKLDPKIEGLIVDEIKHADLVSEKEMDRMIEFFIT 120 Query: 97 NALPESEQD 105 N +P +EQD Sbjct: 121 NLIPPTEQD 129 >UniRef50_Q6J2I4 PbsX-like transcriptional regulator n=2 Tax=Pseudomonas syringae group RepID=Q6J2I4_PSEYM Length = 116 Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 39/67 (58%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M + IG RI+ RK+ TQ +LA+A++ S+ ++ER ++ P G+ L +++ + Sbjct: 2 MSSIRKIIGSRIKAHRKSRGLTQSALAEAIECEVASIGRYERAETAPDGEQLIKMAEFFE 61 Query: 61 CSPTWIL 67 SP +L Sbjct: 62 ISPMDLL 68 >UniRef50_B7KTG3 Putative phage repressor n=2 Tax=Methylobacterium extorquens group RepID=B7KTG3_METC4 Length = 244 Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 24/55 (43%), Positives = 32/55 (58%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 +G IR RK TQ +A ALKIS +V QWE GD+ P L AL+++L+ Sbjct: 5 LGPVIREARKARGLTQGDIASALKISRPAVGQWESGDTGPDRDRLPALARLLRVD 59 >UniRef50_A8S5E8 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S5E8_9CLOT Length = 120 Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 27/72 (37%), Positives = 40/72 (55%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 IG RIR +R+ L +++ LA+ +IS+ +S ERGD + L LS+VL S +IL Sbjct: 15 IGLRIRRQREALGYSRERLAELSEISNSFLSDIERGDRGFSVALLGRLSRVLGLSADYIL 74 Query: 68 FGDEDKQPTPPV 79 FG E + Sbjct: 75 FGTEQATDISDI 86 >UniRef50_B7ANE0 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B7ANE0_9BACE Length = 204 Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 2/68 (2%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERG--DSEPTGKNLFALSKVLQCSPT 64 T +R++ R +TQ L K IS S+ ++E+G + EP+ NL L+K L +P Sbjct: 31 TFADRLKELRNIRNYTQEELGKITNISVQSIRRYEQGRLNEEPSAYNLLQLAKALDVTPE 90 Query: 65 WILFGDED 72 ++L GD + Sbjct: 91 YLLIGDNN 98 >UniRef50_A7JUV7 Putative uncharacterized protein n=1 Tax=Mannheimia haemolytica PHL213 RepID=A7JUV7_PASHA Length = 160 Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 12/132 (9%) Query: 4 KNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQ-WERGDSEPTGKNLFALSKVLQCS 62 K + G RI RKN K ++ + AL +S Q WE EP L ALS++L Sbjct: 7 KVIGFGNRIEQSRKNAKLSRSEVCDALGGIAISTLQAWEADTREPPISKLMALSQILNVE 66 Query: 63 PTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLF 122 P ++L G+ Q +P P ++ P++E+ ++ ++A+++ + Sbjct: 67 PCYLLTGERHSQSLNVTREP---QP-------VYATKPQTEEG-EVVVIKAKLQEAIETL 115 Query: 123 EELLKARQRTNK 134 EE+L+ QR K Sbjct: 116 EEVLEITQREMK 127 >UniRef50_C9AY67 Predicted protein n=4 Tax=Enterococcus RepID=C9AY67_ENTCA Length = 304 Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 23/55 (41%), Positives = 34/55 (61%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 IG++I +RK TQ +LA L +S+ +VS WERG+S P + L L+ +L S Sbjct: 9 IGQQIAAKRKEKNLTQSNLADQLLVSYQAVSNWERGNSLPDIEKLPQLAAILDLS 63 >UniRef50_A9HWQ2 Putative DNA-binding protein n=1 Tax=Bordetella petrii DSM 12804 RepID=A9HWQ2_BORPD Length = 136 Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 3/83 (3%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGD-SEPTGKNLFALSKVLQCSPTW 65 T G+R+R R TQ+ LA ++ ++ +E G +EPT L L++ L +P W Sbjct: 9 TFGQRVRGARLRFGWTQKELASVSGLTQSAIGNYESGQRTEPTSAALIKLAQALDVTPEW 68 Query: 66 ILFGDEDKQPTPPVEKPVALSPK 88 + G E K P +K ++ PK Sbjct: 69 LRQGKEAKD--GPSKKSLSYMPK 89 >UniRef50_A9NHP5 Membrane-anchored DNA-binding protein, putative n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NHP5_ACHLI Length = 231 Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 7/94 (7%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +T G+R+ RK+ +TQ L + L +S S+S+WE + P + L LSK+ Q S + Sbjct: 1 MTTGQRLAKLRKDHNYTQEELGELLDVSRQSISKWESDQAFPETQKLIELSKLYQTSVDY 60 Query: 66 ILFGDEDKQPTPPV------EKPVALSPKELELL 93 +L G+E++ + +P ++PK ++ Sbjct: 61 LL-GNENEHTQSNIGDSTHTNEPFKMTPKLFTMI 93 >UniRef50_Q28NZ2 Transcriptional regulator, XRE family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28NZ2_JANSC Length = 133 Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 40/82 (48%) Query: 2 ETKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQC 61 + + T G+R+ R+ +Q LAK L + ++ WE+ SEP L L+ +L Sbjct: 13 DAETTTFGDRVTGAREAAGLSQPELAKRLGVRVKTIRAWEQDQSEPRANKLGTLAGILGV 72 Query: 62 SPTWILFGDEDKQPTPPVEKPV 83 S W+L G + +P + P+ Sbjct: 73 SMMWLLAGQGEGLDSPELSDPL 94 >UniRef50_A8UD60 DNA-binding protein n=2 Tax=Carnobacterium sp. AT7 RepID=A8UD60_9LACT Length = 170 Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 33/57 (57%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 + +GER++ R N ++Q +A L IS S+S+WE G+S P NL LS + S Sbjct: 1 MALGERLKASRVNKGYSQGDVADYLHISRQSISKWENGNSYPDLDNLVKLSTYYEVS 57 >UniRef50_Q70CB1 Putative transcriptional regulator n=2 Tax=Streptococcus thermophilus RepID=Q70CB1_STRTR Length = 113 Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 38/68 (55%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + ER++ RK TQ +A+ L IS + + WERG +PT NL ++++L S + Sbjct: 1 MEFSERLKELRKKANFTQVEVAEKLGISQPAYASWERGVKKPTQDNLVRIAQILNVSVDY 60 Query: 66 ILFGDEDK 73 ++ E+K Sbjct: 61 LVGNSEEK 68 >UniRef50_C2HKP6 XRE family transcriptional regulator n=2 Tax=Lactobacillus acidophilus RepID=C2HKP6_LACAC Length = 174 Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 43/81 (53%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 +E +++ ++I R + +Q LA+ L +S SVS+WE G ++P + ALS + Sbjct: 37 IEVIRMSLNQKIAQLRNDNNWSQEELAEKLNVSRQSVSKWESGQAKPDLDKIIALSDIFD 96 Query: 61 CSPTWILFGDEDKQPTPPVEK 81 S ++L D +++ P K Sbjct: 97 VSTDYLLKDDNEEKSNPSTNK 117 >UniRef50_P96631 HTH-type transcriptional regulator immR n=1 Tax=Bacillus subtilis RepID=IMMR_BACSU Length = 127 Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 64/125 (51%), Gaps = 3/125 (2%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +++G+R++ R+ +TQ+ A+ L I + ++S +ER +P L LS + S + Sbjct: 1 MSLGKRLKEARQKAGYTQKEAAEKLNIGNNNLSNYERDYRDPDTDTLLKLSNLYNVSTDY 60 Query: 66 ILFGDE--DKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEM-RARVKNFNKLF 122 +L DE K T + K + + +EL+ + + + E D + A + + +KN K Sbjct: 61 LLGKDEVSKKNETDLLNKTINEAIQELKDEDTLLFMNDGEFDEETARLVKKALKNGIKFI 120 Query: 123 EELLK 127 +EL K Sbjct: 121 DELKK 125 >UniRef50_Q3AB02 DNA-binding protein n=2 Tax=Clostridia RepID=Q3AB02_CARHZ Length = 127 Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 23/76 (30%), Positives = 41/76 (53%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 ME IG+RIR R+ L+ ++ A+ L +S V Q ERG+ + + L +++ L Sbjct: 1 MEINTKAIGQRIREEREKLELSREEFAEILGLSDYYVGQLERGERQMSLPVLVNIAQCLH 60 Query: 61 CSPTWILFGDEDKQPT 76 S +++FG +P+ Sbjct: 61 VSLDYLIFGSTPFEPS 76 >UniRef50_A6X8F8 Cupin 2 conserved barrel domain protein n=2 Tax=Ochrobactrum RepID=A6X8F8_OCHA4 Length = 202 Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 36/60 (60%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 IG RIR RR+ L T L++ +S ++SQ ERG PT + L+ +++VL SP ++ Sbjct: 23 IGARIRLRRQTLGLTLGYLSEVSGLSTGALSQIERGLVSPTVRTLYTIAEVLSMSPAQLI 82 >UniRef50_C5EPX3 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EPX3_9FIRM Length = 141 Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 1/69 (1%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGK-NLFALSKVLQCSPT 64 + +GERIR RK TQ LA L + +V+++E G + LF ++++L+ SP Sbjct: 1 MELGERIRSLRKKKGLTQEELASKLGLQKSAVAKYENGRVTNIKRATLFKMAEILEVSPG 60 Query: 65 WILFGDEDK 73 +++G EDK Sbjct: 61 ELMYGKEDK 69 >UniRef50_C3X9A6 Predicted protein n=2 Tax=Oxalobacter formigenes RepID=C3X9A6_OXAFO Length = 131 Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 37/65 (56%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 I +RI R++L +Q LA+ + ++ +V +WE+ + P G L L+ VL SP +I Sbjct: 4 IAKRIENCRRHLNFSQSELARKVGVTPQAVQKWEKAKTVPRGYTLEKLAGVLGVSPAYIQ 63 Query: 68 FGDED 72 FG D Sbjct: 64 FGITD 68 >UniRef50_C6JFU4 Predicted protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFU4_9FIRM Length = 111 Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 36/62 (58%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 TIG+RI R NL TQ L + S ++S++E G ++P+ +NL LSKVL + Sbjct: 5 TIGKRIAEARINLNITQEQLEELSGFSVSTISRFETGRTQPSIENLIKLSKVLNVGIDYF 64 Query: 67 LF 68 L+ Sbjct: 65 LY 66 >UniRef50_B6G1K3 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G1K3_9CLOT Length = 359 Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 25/65 (38%), Positives = 39/65 (60%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +T+ E+I RK +Q LA+ L IS SVS+WE G+S PT + L +S++ + S + Sbjct: 1 MTLSEKIMNLRKKNGWSQEELAERLDISRQSVSKWESGESVPTLEKLIRISEIFEVSTDY 60 Query: 66 ILFGD 70 +L D Sbjct: 61 LLKDD 65 >UniRef50_C4F7R9 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F7R9_9ACTN Length = 276 Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 38/66 (57%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + E+I+ RK L +Q LA A+ +S +VS WERGD+ P ++L + + S Sbjct: 1 MILSEQIKLGRKELGMSQADLADAIWVSRNTVSNWERGDTTPDIQSLVLMGALFGLSLDE 60 Query: 66 ILFGDE 71 ++ GDE Sbjct: 61 MVKGDE 66 >UniRef50_Q7N301 Similar to bacteriophage repressor protein CI n=1 Tax=Photorhabdus luminescens subsp. laumondii RepID=Q7N301_PHOLL Length = 212 Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 1/69 (1%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +TI ER++ RR + TQ LA + S+ Q E+G ++ + L L+ LQCS ++ Sbjct: 1 MTIAERVKTRRIEMGLTQTELADLIGTKQQSIEQLEKGKTKRP-RFLPELAVALQCSVSY 59 Query: 66 ILFGDEDKQ 74 +L+G EDK+ Sbjct: 60 LLYGTEDKK 68 >UniRef50_Q2W6H5 Predicted transcriptional regulator n=14 Tax=Alphaproteobacteria RepID=Q2W6H5_MAGSA Length = 167 Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 17/117 (14%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQC--- 61 ++ +G R+R RR L +Q L +A+ ++ V ++ERG + LF LS+VL Sbjct: 33 DVHVGGRMRLRRTLLGMSQEKLGEAIGLTFQQVQKYERGANRIGASRLFDLSRVLDVPIS 92 Query: 62 -------------SPTWILFGDEDKQPTPPVEKPVALSPKE-LELLELFNALPESEQ 104 SP I+ G + TP +P + +E LEL+ + +PE ++ Sbjct: 93 YFFDDMADQVQAQSPVNIIKGSAEPSETPAGFEPDPMMKRETLELVRAYYRVPEQQR 149 >UniRef50_C5SE84 Transcriptional regulator, XRE family n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SE84_CHRVI Length = 273 Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 4/75 (5%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALK--ISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 N +IG RIR RRK L + R L++ + IS V+++ +E G P + + LS + + S Sbjct: 158 NRSIGARIRTRRKQLGLSLRKLSERIDGAISSVALNNYEIGLRRPGIEEVMQLSAIFEVS 217 Query: 63 PTWILFGDEDKQPTP 77 P W+L D+ +P P Sbjct: 218 PAWLLCIDD--RPPP 230 >UniRef50_A6P0G8 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P0G8_9BACE Length = 111 Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 3/97 (3%) Query: 1 METKNLT-IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVL 59 ME + L IG+R+R RR++L T+ +A+ I Q E G S+ + L LS + Sbjct: 1 MEKQQLIDIGQRLRQRRQDLGLTREKMAELADIGTGYYGQLEVGTSQMSIDTLIKLSHSM 60 Query: 60 QCSPTWILFGDED--KQPTPPVEKPVALSPKELELLE 94 +ILFGD P+ ++ +P+EL+L E Sbjct: 61 HLPMEYILFGDGYIPGDPSAVIDLLHRCTPRELKLAE 97 >UniRef50_C5ETI6 Predicted protein n=3 Tax=Clostridiales RepID=C5ETI6_9FIRM Length = 113 Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 42/82 (51%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 G ++R +RK K + + LA+ ++H + Q E G+ P+ LF + VL SP ++ Sbjct: 11 FGAKLRGKRKECKLSYQELAERCHVNHGYIRQLEAGNKLPSVSLLFIICDVLGTSPNYLF 70 Query: 68 FGDEDKQPTPPVEKPVALSPKE 89 ED +E+ L+P++ Sbjct: 71 GYTEDNADKELLERIYQLTPEQ 92 >UniRef50_C9B2Y2 Predicted protein n=2 Tax=Enterococcus casseliflavus RepID=C9B2Y2_ENTCA Length = 211 Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 3/63 (4%) Query: 14 YRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFGD--E 71 YR N TQ+ LA+ L +S S+S+WE GD+ P+ KN+ +S++L S +L + E Sbjct: 16 YRIAN-SLTQQELAEILDVSDKSISKWELGDTYPSKKNVIKISELLGISIEILLIEEIVE 74 Query: 72 DKQ 74 D+Q Sbjct: 75 DRQ 77 >UniRef50_B8F9V4 Transcriptional regulator, XRE family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8F9V4_DESAA Length = 196 Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 6/68 (8%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 KN+ +G RK +Q++LA A +S +++ E G EP+ + A++ LQCS Sbjct: 16 AKNVAVG------RKAHNMSQQALADASGVSKSTIAAIETGKGEPSLSTIVAIACTLQCS 69 Query: 63 PTWILFGD 70 P + F D Sbjct: 70 PQMLFFDD 77 >UniRef50_A7VII3 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VII3_9CLOT Length = 101 Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 35/62 (56%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + I ERIR R+ + TQ +LA AL IS +V+ W+ G S+P+ L L+ S + Sbjct: 3 MDISERIRELREVIGITQSNLASALNISRSAVNAWKMGTSKPSIDTLVDLADFFHVSTDY 62 Query: 66 IL 67 +L Sbjct: 63 LL 64 >UniRef50_C0GHG0 Transcriptional regulator, XRE family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHG0_9FIRM Length = 255 Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 40/73 (54%) Query: 2 ETKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQC 61 E K + G++IR R+ TQ+ LA A +IS V+Q E G +P+ K + +SK L Sbjct: 131 EGKLIATGKKIRMTRETKGMTQKQLANAAQISPGLVAQLETGKVQPSLKTIERISKALSV 190 Query: 62 SPTWILFGDEDKQ 74 S +++ ED + Sbjct: 191 SVCYLILEQEDAE 203 >UniRef50_A3ICU1 Putative uncharacterized protein n=1 Tax=Bacillus sp. B14905 RepID=A3ICU1_9BACI Length = 134 Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 2/91 (2%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + R++ RK K TQ LA L+ + ++S +E G S P+ + L LSK+L + + Sbjct: 1 MMFNHRLKAARKAKKLTQEQLAGKLQTTKGTISNYENGHSTPSNEMLVLLSKILDVTTDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELF 96 +L G D PTP K +S ++ L + Sbjct: 61 LL-GVTD-NPTPVDYKLAGISDEDYNNLSAY 89 >UniRef50_A7DV91 DNA-binding protein RDGA n=1 Tax=Vibrio vulnificus RepID=A7DV91_VIBVU Length = 208 Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%) Query: 6 LTIGERIR-YRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 +++G RI+ R ++L +++ L L +S +V+QWE G + P+ K L LS+VL+ + Sbjct: 1 MSLGGRIKKLREESLHISKKELGAILGVSQSAVNQWENGVNYPSQKRLIELSRVLKTTYE 60 Query: 65 WILFG 69 W++ G Sbjct: 61 WLVNG 65 >UniRef50_B5UTN8 Transcriptional regulator Xre n=10 Tax=Bacillus cereus group RepID=B5UTN8_BACCE Length = 117 Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 2/94 (2%) Query: 22 TQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFGDEDKQPTPPVEK 81 TQ+ LA A+ +SHVSV + G P + L ++ L + ++L G D P ++ Sbjct: 17 TQQQLADAIGVSHVSVYNYVEGKKSPGTRTLQKIANHLNVTTDYLL-GLSDS-PDLTADQ 74 Query: 82 PVALSPKELELLELFNALPESEQDTQLAEMRARV 115 + L+ + E+L++ N LPE ++ L ++ V Sbjct: 75 DLQLTKEAQEILQIINDLPEEQRKKALEQLEMFV 108 >UniRef50_C1D869 CI protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D869_LARHH Length = 128 Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/75 (30%), Positives = 38/75 (50%) Query: 10 ERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFG 69 +R R R + L TQR LAK +S ++S + G EPT L ++ L P +++FG Sbjct: 31 DRARRRMRELDLTQRELAKRCGVSTAAMSHYMNGRREPTLSQLQLIADELALDPAFMVFG 90 Query: 70 DEDKQPTPPVEKPVA 84 D+ + + +A Sbjct: 91 YLDRDKVVRIARKIA 105 >UniRef50_C3RJ47 Predicted protein n=2 Tax=Bacteria RepID=C3RJ47_9MOLU Length = 264 Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/55 (43%), Positives = 32/55 (58%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 IG RI RKNL +TQ+ L + +S +VS+WERG P L LS+ L+ S Sbjct: 6 IGIRILSARKNLGYTQKQLGNLINVSDKAVSKWERGIGCPDISLLLPLSEALKMS 60 >UniRef50_Q0C575 DNA-binding protein n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C575_HYPNA Length = 143 Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 1/70 (1%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 +GER+R RR L TQ +A AL IS+ + ++E G + + L +++VL+ P W Sbjct: 16 VGERMRRRRILLGLTQDQVADALGISYQQIQKYETGANRISAGRLAQIAEVLEVLPGW-F 74 Query: 68 FGDEDKQPTP 77 FG + P Sbjct: 75 FGVPEAADAP 84 >UniRef50_D2U1N2 Phage transcriptional regulator n=1 Tax=Arsenophonus nasoniae RepID=D2U1N2_9ENTR Length = 230 Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 T+ ERI+ R K TQ LA+ L ++ SV QWE +EP L ++ VL + W+ Sbjct: 3 TMHERIKQARLAKKMTQAELAEKLSVTPQSVQQWETS-TEPKKNRLMKIADVLDINVNWL 61 Query: 67 LFGDE 71 LFG++ Sbjct: 62 LFGEK 66 >UniRef50_D2LE89 Transcriptional regulator, XRE family n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LE89_RHOVA Length = 174 Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust. Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 1/73 (1%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 ++ +G R+RYRR + +Q L + + ++ + ++E+G + LF LSK+L+ P Sbjct: 33 DIHVGSRVRYRRMIVGMSQEKLGEKMNLTFQQIQKYEKGTNRIGASRLFQLSKILEV-PV 91 Query: 65 WILFGDEDKQPTP 77 F D P Sbjct: 92 GYFFEDAFAHSAP 104 >UniRef50_C7N0U4 Predicted transcriptional regulator n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N0U4_SLAHD Length = 459 Score = 43.9 bits (102), Expect = 0.001, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 31/54 (57%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKV 58 N + ER+ R+ +Q LA L +S +VS+WER +S P NL AL+K+ Sbjct: 2 NYEVAERLAELRRAKGLSQEELAHELGLSRQAVSKWERAESSPDTDNLIALAKL 55 >UniRef50_C8ZY37 Transcriptional regulator n=4 Tax=Enterococcus RepID=C8ZY37_ENTGA Length = 397 Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 31/57 (54%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 L IG+ I RRK+ + TQ LA + +S SVS+WE G S P L L+ CS Sbjct: 3 LPIGQEIAKRRKDKQITQTELADFMSVSKASVSKWETGQSYPDITLLPLLAAFFDCS 59 >UniRef50_C8WKX0 Transcriptional regulator, XRE family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WKX0_EGGLE Length = 247 Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 35/58 (60%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 N+ I +R+ R+ ++Q LA+ L +S +VS+WER +S P NL AL+K+ S Sbjct: 12 NVEIAQRLAAMRREQGYSQEELAERLGLSRQAVSKWERAESSPDTGNLIALAKLYGVS 69 >UniRef50_A3CR12 Transcriptional regulator, XRE family, putative n=5 Tax=Lactobacillales RepID=A3CR12_STRSV Length = 168 Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 35/64 (54%) Query: 16 RKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFGDEDKQP 75 RK +Q LA+ + +S S+S+WE G + P + + LSK+ Q + ++L D DK Sbjct: 11 RKEKGWSQEKLAEQINVSRQSISKWESGQALPELEKVVELSKIFQVTTDYLLLEDSDKPE 70 Query: 76 TPPV 79 PV Sbjct: 71 IKPV 74 >UniRef50_B5Q1C0 Transcriptional regulator, XRE family n=1 Tax=Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066 RepID=B5Q1C0_SALHA Length = 110 Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 6/101 (5%) Query: 32 ISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFGDEDKQPTPPV-EKPVA-----L 85 +S +V QW +GD+ P G+ L L+ V W + +P+ + E P + L Sbjct: 2 VSPQAVQQWAKGDTTPRGERLKRLAAVTGKPEHWFFMPLDANEPSNSLSEIPTSSSRDML 61 Query: 86 SPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEELL 126 KE LL LFN +PE+E++ + +A ++ + L +++L Sbjct: 62 DDKEKALLALFNQMPEAEKNRLIVHAKATLQELDLLKDDVL 102 >UniRef50_A1VSI6 Putative transcriptional regulator, XRE family n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VSI6_POLNA Length = 126 Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 4/96 (4%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 L+IGERI R LK +Q ++A +++ V+ +WERG P L ++K L + Sbjct: 2 LSIGERILEERNRLKMSQAAMATHCQVTTVTQGKWERGKGTPNAGYLAEMAK-LGVDVMY 60 Query: 66 ILFGDEDKQPTPPVEKP---VALSPKELELLELFNA 98 ++ G P E+ V L+ ++ L++ ++A Sbjct: 61 VVTGMRMPAPAEGTEQGTQLVQLNQRQQALIQNYDA 96 >UniRef50_Q161J2 Helix-turn-helix domain protein, putative n=19 Tax=Bacteria RepID=Q161J2_ROSDO Length = 135 Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 10/119 (8%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 T G+R+ R+ + TQ LA+ L + ++ WE SEP L ++ +L S W+ Sbjct: 14 TFGDRLAAARETSEMTQAELARRLGVRVATLRSWENDLSEPRANRLSMMAGLLNVSMMWL 73 Query: 67 LFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEEL 125 + G + P E+ + S E+ N + E D M ARV+ +L ++L Sbjct: 74 INGQGEGLDAPMEERALPASAS-----EVLNEMRELRTD-----MIARVEQMGRLEKKL 122 >UniRef50_A4JWD1 Putative phage repressor n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JWD1_BURVG Length = 235 Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 41/69 (59%), Gaps = 1/69 (1%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 ++G R+ RR L +Q+ LA+ + ++ ++S E+G S +G ++ +L+K L P W+ Sbjct: 7 SVGARVSARRTELGISQKELARRVGLTQPTISALEKGKSNTSG-SIASLAKALGVVPLWL 65 Query: 67 LFGDEDKQP 75 G DK+P Sbjct: 66 ETGLGDKEP 74 >UniRef50_C7T8R9 Putative uncharacterized protein n=2 Tax=Lactobacillus rhamnosus RepID=C7T8R9_LACRG Length = 106 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 42/74 (56%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 IGE+I+ RR+ L ++ LA+ + S VS+WE+G S P K L A+S L+ S ++ Sbjct: 3 IGEQIKDRREALAWSREELAQVVNGSVQQVSRWEKGISYPNIKQLIAISDRLELSLDNLI 62 Query: 68 FGDEDKQPTPPVEK 81 D Q T ++K Sbjct: 63 KSDPKLQKTIQIDK 76 >UniRef50_B4RE45 Transcriptional regulator, Cro/CI family n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RE45_PHEZH Length = 128 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 4/108 (3%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 ++ +G RIR RK +Q++LA+A ++ + ++ERG + + L +++ L P Sbjct: 13 DVAVGARIRLLRKLKGLSQQALAEAAGVTFQQIQKYERGANRVSASMLARIARTLGV-PV 71 Query: 65 WILFGDEDKQPTPPVEKPVAL--SPKELELLELFNALPESEQDTQLAE 110 +FG E + V++ AL P LELL+ + LP + L E Sbjct: 72 AEMFG-EASPTSSAVDEVAALLAEPGALELLKAYADLPRGASRSALVE 118 >UniRef50_C0GLD1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GLD1_9DELT Length = 915 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/81 (38%), Positives = 39/81 (48%), Gaps = 1/81 (1%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 T GER+R R TQ LA L IS + ERG+S P+ + L +LQ P Sbjct: 5 TFGERVRLFRALKNLTQGQLADMLDISRHHMGCLERGESGPSFGLIRKLCTLLQVHPA-S 63 Query: 67 LFGDEDKQPTPPVEKPVALSP 87 LF D++P P E V SP Sbjct: 64 LFLSSDQEPEYPEESQVDTSP 84 >UniRef50_Q48DU9 RtrR protein n=10 Tax=Gammaproteobacteria RepID=Q48DU9_PSE14 Length = 76 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/70 (32%), Positives = 38/70 (54%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 +G RIR +RK + +Q +LA A I + + ERG+ T + L+ ++ VL C P+ + Sbjct: 7 ALGRRIRTQRKACQISQDALALACNIDRSYMGRIERGEVNITVEKLYRIAGVLACDPSGL 66 Query: 67 LFGDEDKQPT 76 L + QP Sbjct: 67 LPQVSELQPA 76 >UniRef50_B5XSM2 DNA-binding protein n=7 Tax=Enterobacteriaceae RepID=B5XSM2_KLEP3 Length = 129 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 14/113 (12%) Query: 22 TQRSLAKA--LKISHV---SVSQWERGDSEPTGKNLFALSKVLQCSPTWILFGDEDKQPT 76 TQR ++KA +I+ V +V+ W + + K+ AL++ S TW+L Sbjct: 19 TQRGISKADMARIAGVTPQAVNGWFK-KGVISKKSAIALAEAANVSVTWLL--------G 69 Query: 77 PPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEELLKAR 129 V + L P E ++L LF LPE+EQ+ + R+K + E+ L+ R Sbjct: 70 EKVSEDSGLKPNESKMLRLFRQLPEAEQERMIDTFEVRLKEIDDYVEKYLRGR 122 >UniRef50_A8V2S1 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V2S1_9AQUI Length = 128 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/50 (44%), Positives = 30/50 (60%) Query: 9 GERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKV 58 G+ IR RK L TQ A+ L + +V++WE G SEP G+ L AL K+ Sbjct: 3 GKEIRELRKKLGLTQEEFAQLLGVGFTTVNRWENGKSEPRGQALEALEKL 52 >UniRef50_C4LFU1 Transcriptional regulator, XRE family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LFU1_TOLAT Length = 214 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 35/58 (60%) Query: 15 RRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFGDED 72 RRK T ++LA + +S +VSQWE + P G+N+ L ++L+ + W+ +G+ D Sbjct: 2 RRKMFGLTMQALADYVGVSQPTVSQWESDLTLPKGQNMRRLEEILRTNSDWLTWGEGD 59 >UniRef50_B1HS96 Transcriptional regulator (Phage-related) n=2 Tax=Bacillaceae RepID=B1HS96_LYSSC Length = 118 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 51/99 (51%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 + +R++ RK K TQ +AK L IS + +E+G +E + ++ L++ S +IL Sbjct: 4 VSQRLKELRKEAKLTQADVAKFLSISESAYGYYEQGRNEISIGSVQKLAEKYDVSVAYIL 63 Query: 68 FGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDT 106 ++KQP E + EL + LP+S+++T Sbjct: 64 CETDEKQPFDKDEAAFHAFANDPELQVFYKELPKSDEET 102 >UniRef50_A3M515 Transcriptional regulator Cro/CI family n=2 Tax=Acinetobacter baumannii ATCC 17978 RepID=A3M515_ACIBT Length = 221 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 32/62 (51%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 + ERIR R L L + +VS W +G P+ + +L++VL+ +PTW+L Sbjct: 4 VSERIRARMSELNLRHVDLMRGTGAGKATVSSWIKGAVNPSATYIDSLAQVLKTTPTWLL 63 Query: 68 FG 69 G Sbjct: 64 TG 65 >UniRef50_C2CIB8 DNA-binding protein n=2 Tax=Clostridiales RepID=C2CIB8_9FIRM Length = 367 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 14/122 (11%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 L IGE I +RK TQ LA+ + ++ SVS+WE G S P L L+ S Sbjct: 2 LKIGEIILQKRKERGITQEELAEFMMVTKASVSKWETGQSHPDILLLPKLATFFNISVDE 61 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELE--LLELFNALPESEQDTQLAEMRARVKNFNKLFE 123 ++ D D LS +++ ++L N +P++ D+ + +++ ++K + F+ Sbjct: 62 LIGYDPD------------LSSAQIQKFYIDLENRVPDAGMDSIVEDIKIKIKQYYSCFD 109 Query: 124 EL 125 L Sbjct: 110 LL 111 >UniRef50_D1BQX9 Transcriptional regulator, XRE family n=2 Tax=Veillonella parvula RepID=D1BQX9_VEIPT Length = 290 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 1/90 (1%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + E++R RK +Q LA+ L +S ++++WE G+ P NL ALS V S Sbjct: 1 MDFNEKLREYRKQSGLSQGKLAETLNVSRQAITKWESGNGMPDISNLKALSGVFNVSVDE 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLEL 95 +L +E +P P E V E++ ++ Sbjct: 61 LL-SEEAVKPRYPYESIVEYDIDEIKHFDI 89 >UniRef50_D1AGN9 Transcriptional regulator, XRE family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AGN9_SEBTE Length = 127 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/86 (26%), Positives = 54/86 (62%), Gaps = 2/86 (2%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKI-SHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 ++IG+RI+ RR+ L +TQ LA+ + S ++++ E G ++ T + A +K+L+ +P+ Sbjct: 1 MSIGKRIKKRREELGYTQEQLAEKMGYKSKSTINKIEAGINDITQSKITAFAKILKTTPS 60 Query: 65 WILFGDEDKQPTPPVEKPVALSPKEL 90 +++ ++++ V+ + L+ +EL Sbjct: 61 YLMGWEDEESEIYKVDTSI-LTDEEL 85 >UniRef50_A9C1N8 Transcriptional regulator, XRE family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9C1N8_DELAS Length = 110 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 7/102 (6%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 IGER+R R L Q ++A A +S +++ WE+G+ P L ++ L +++ Sbjct: 9 IGERLRQERLRLDVAQLAMADACDVSRGTLATWEKGEQSPNAAALAVMAG-LGVDVLYVV 67 Query: 68 FGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLA 109 G + V+ L+P E ELL+ + +S + +A Sbjct: 68 TG---QHANASVQT---LAPDERELLDCYGRADDSGRAAIMA 103 >UniRef50_A6LTV9 Helix-turn-helix domain protein n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LTV9_CLOB8 Length = 123 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 7/91 (7%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 TIGE+I+ R+ Q+ LA+ I+ ++S++E G EP G+ + L+ VL S + Sbjct: 3 TIGEKIQILREERNLKQKELAELAGITEATLSRYENGKREPKGEIISKLANVLNVSTDY- 61 Query: 67 LFGDED-----KQPTPPVEKPVALS-PKELE 91 L G D +PT + + V L KELE Sbjct: 62 LLGRNDIITSSVEPTGNLAEQVGLKLIKELE 92 >UniRef50_B8CP56 Repressor of flagellae, putative n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CP56_SHEPW Length = 116 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 1/67 (1%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGD-SEPTGKNLFALSKVLQCSPT 64 +TIGE I+ +RK+L T+ L +S +S+ ERG+ + P + L A+S L S Sbjct: 1 MTIGENIKLKRKSLGMTRSELIDRSGVSTAQLSRMERGEQNNPNLETLVAISTALNTSID 60 Query: 65 WILFGDE 71 I+FG++ Sbjct: 61 EIVFGEQ 67 >UniRef50_A3VTK2 Transcriptional regulator, XRE family protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VTK2_9PROT Length = 226 Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 3/95 (3%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 TIG+RI+ RK + Q +L + L +S +V+ WE +P L L+ L+ + W+ Sbjct: 18 TIGQRIKAARKRCRLNQENLGRELGVSQPTVANWEADIHQPRPFMLGKLADRLEVTVGWL 77 Query: 67 LFGDEDKQPTPPVEKPVA-LSPKELELLELFNALP 100 GDE + V+ P+A + L + ++NA P Sbjct: 78 AGGDEGGSVS--VDHPMASYLRRPLRHVPIYNARP 110 >UniRef50_C8T0E1 Repressor protein cI n=1 Tax=Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884 RepID=C8T0E1_KLEPR Length = 327 Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 4/82 (4%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKN-LFALSKVLQCSPTW 65 ++ +R+ RR+ L TQ +LAK ++ V++S+ E G ++ N LF +S L C P W Sbjct: 97 SLADRLISRRELLGLTQEALAKRAGVTRVAISKAELGLTKNFNSNTLFKISSALGCEPEW 156 Query: 66 ILF--GDEDKQP-TPPVEKPVA 84 + G ++K P TP +KPV+ Sbjct: 157 LSTGKGTQEKLPKTPQQQKPVS 178 >UniRef50_B5ZDN3 Transcriptional regulator, XRE family n=4 Tax=Alphaproteobacteria RepID=B5ZDN3_GLUDA Length = 174 Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 3/98 (3%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 ++ +G RIR RR + +Q L AL ++ V ++ERG + + L+ LS+VL + Sbjct: 35 DVHVGGRIRLRRTLMGLSQERLGDALGLTFQQVQKYERGTNRVSASRLYELSEVLDVPVS 94 Query: 65 WILFGDEDKQPTPPVEKPVALSPKELELLELFNALPES 102 + G + Q + P + E F PE Sbjct: 95 FFFDGLDSGQAGSKATNAI---PGFAQAQEAFGGAPEG 129 >UniRef50_Q1CP27 Transcriptional regulator, Cro/CI family n=8 Tax=root RepID=Q1CP27_STRPF Length = 271 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/125 (25%), Positives = 63/125 (50%), Gaps = 14/125 (11%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKI-SHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 +G+RIR R+ TQ L++ L + ++ +VS+WE+ ++ P GK+L L+++ + ++ Sbjct: 24 LGDRIRKLREGRNMTQTELSEILGMKTYTTVSKWEKNENFPKGKDLKKLAEIFNVTSDYL 83 Query: 67 LFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQ-------DTQLAEMRARVKNFN 119 L T + + ++ E++ ++N L + Q + QL E V F+ Sbjct: 84 L------GLTDSKLGKITIQNEQPEIVSIYNQLEQPRQEKVLNFANEQLEEQNKTVSIFD 137 Query: 120 KLFEE 124 K EE Sbjct: 138 KKSEE 142 >UniRef50_C3FZZ5 Putative uncharacterized protein n=1 Tax=Bacillus thuringiensis serovar andalousiensis BGSC 4AW1 RepID=C3FZZ5_BACTU Length = 156 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 33/60 (55%) Query: 22 TQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFGDEDKQPTPPVEK 81 TQ+SLA+ L +S +S WER + P ++L L+KV + +IL D+ +EK Sbjct: 19 TQKSLAEKLGVSSQVISNWERAYTSPNQEDLIKLAKVFNVTIDYILSSDKIINLNYDIEK 78 >UniRef50_Q0AK74 Transcriptional regulator, XRE family n=2 Tax=Alphaproteobacteria RepID=Q0AK74_MARMM Length = 140 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 ++ +G RIR RR+ LK +Q L L ++ V ++ERG + L+ +S+VL+ P Sbjct: 13 DIHVGSRIRLRRQLLKMSQERLGDDLGVTFQQVQKYERGANRVGASRLYRMSRVLEV-PV 71 Query: 65 WILF 68 F Sbjct: 72 QFFF 75 >UniRef50_Q5FSV4 Transcriptional regulator n=1 Tax=Gluconobacter oxydans RepID=Q5FSV4_GLUOX Length = 212 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 2/79 (2%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 ++ +G RIR RR + +Q L +AL ++ + ++ERG + L+ L++VL P Sbjct: 37 DVHVGNRIRLRRTLMGLSQEKLGEALGLTFQQIQKYERGANRVGASRLYDLAQVLDV-PI 95 Query: 65 WILFGD-EDKQPTPPVEKP 82 F D ++ +P+ P P Sbjct: 96 GFFFDDMQEARPSAPSSAP 114 >UniRef50_C7VU74 Cro/CI family transcriptional regulator n=1 Tax=Enterococcus faecalis Fly1 RepID=C7VU74_ENTFA Length = 246 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVS-VSQWERGDSEPTGKNLFALSKVLQCSP 63 N+ G RI+ R +L T AK + +S S V++WE+G S+P + +S++ Sbjct: 11 NIEFGNRIKVVRTDLNLTMDEFAKRIGVSGKSTVNEWEKGRSKPNKNAMKKISEISNVPL 70 Query: 64 TWILFGD 70 W FGD Sbjct: 71 EWFYFGD 77 >UniRef50_B4W5L7 Helix-turn-helix domain protein n=2 Tax=Brevundimonas RepID=B4W5L7_9CAUL Length = 142 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 19/68 (27%), Positives = 39/68 (57%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 +G R++ +R +L TQ +LA+A+ +S V ++E+G + + LF +++ ++ + Sbjct: 21 VGRRVQEKRLDLGLTQTALARAVGVSFQQVQKYEKGANRVSASKLFEMAEFMKVDIPFFF 80 Query: 68 FGDEDKQP 75 G D QP Sbjct: 81 QGFHDAQP 88 >UniRef50_B0G8M8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0G8M8_9FIRM Length = 298 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/69 (37%), Positives = 37/69 (53%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + IG+ I +RK+L TQ+ LA+ L +S SVS+WERG P L +L S Sbjct: 4 IKIGKYIASKRKSLGMTQKQLAEKLGMSDKSVSKWERGVCLPDVSVYKELCSILGISLNE 63 Query: 66 ILFGDEDKQ 74 L G++ Q Sbjct: 64 FLAGEDIAQ 72 >UniRef50_Q97D35 Predicted transcriptional regulator, containing DNA-binding domain of xre family n=1 Tax=Clostridium acetobutylicum RepID=Q97D35_CLOAB Length = 232 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 36/63 (57%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 TIGER++Y RK TQ+ +A+ + ++S +E+ D P+ L + + + + WI Sbjct: 3 TIGERLKYLRKLNNLTQKQVAEKTGVQRGNISHYEKNDFLPSRVALISFANFFKTNYDWI 62 Query: 67 LFG 69 ++G Sbjct: 63 VYG 65 >UniRef50_B1L086 DNA-binding protein n=11 Tax=Clostridium RepID=B1L086_CLOBM Length = 136 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 30/60 (50%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 I +R++Y R Q LAK L +S +VS WE G+ P L L+ CS +IL Sbjct: 4 IKDRLKYERLRKDLNQTELAKILNVSKQTVSNWENGNRIPDTLTLSKLADFFNCSVDYIL 63 >UniRef50_D1EET7 Transcriptional regulator n=13 Tax=Neisseria RepID=D1EET7_NEIGO Length = 138 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 5/110 (4%) Query: 4 KNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSP 63 K G+R++ R L Q A+ S +WERG++ P+ + LF+ SK+ Sbjct: 15 KTSLFGKRLKEERIKLGLNQAEAAEKCGFSREMWGKWERGENRPSSEKLFSFSKI-GIDI 73 Query: 64 TWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRA 113 +++ G + P E +LS +E ELL LF L S +LA+ A Sbjct: 74 DYVMHGRRGETAAMPSE---SLSAEEKELLALFRQLG-SGSRKELADYAA 119 >UniRef50_B3WV03 Repressor protein C2 n=3 Tax=Enterobacteriaceae RepID=B3WV03_ECOLX Length = 207 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +++ R + RR L TQ +A + +S S+ E G + +NL L+K L+CSP W Sbjct: 1 MSLAARFKARRLELGMTQVEVANSAGVSQQSIESIESGRTRKP-RNLLDLAKALKCSPDW 59 Query: 66 ILFG 69 +L G Sbjct: 60 LLNG 63 >UniRef50_B0ACL3 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACL3_9CLOT Length = 115 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 36/57 (63%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSP 63 ++GE ++ R K TQ +++++ +S +VS+WE G S+P+ NL AL+K+ S Sbjct: 51 SLGEVLKENRIRCKMTQEFVSESIGVSRQAVSKWENGASDPSTSNLLALAKLYGISA 107 >UniRef50_C4VDR0 Helix-turn-helix domain protein n=6 Tax=Enterococcus faecalis RepID=C4VDR0_ENTFA Length = 257 Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 6/68 (8%) Query: 15 RRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFGDEDKQ 74 RR N +TQ +A+ L ++ ++S+WE G S P+ NL LS + S DE Q Sbjct: 10 RRINNHYTQEQIAQKLHVTTQAISKWETGQSIPSIDNLLMLSDLYNVSI------DELIQ 63 Query: 75 PTPPVEKP 82 +P +KP Sbjct: 64 GSPYFKKP 71 >UniRef50_C3CR43 Transcriptional regulator, XRE n=6 Tax=Bacillus thuringiensis RepID=C3CR43_BACTU Length = 109 Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 36/61 (59%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 TIG RI+ RK+LK Q LA A+ +++ +S +E EP+ + + +++V S +I Sbjct: 4 TIGSRIKEVRKSLKMKQNELADAVGVNYTMISLYESNKREPSRETVENIARVTNVSADYI 63 Query: 67 L 67 + Sbjct: 64 M 64 >UniRef50_A6UXD9 Conserved domain protein n=2 Tax=Pseudomonas aeruginosa RepID=A6UXD9_PSEA7 Length = 73 Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 35/61 (57%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 +GERIR +RK + +Q +LA A + V + ERG+ T + L+ ++ L C P+ + Sbjct: 7 ALGERIRMQRKACRISQDALALACSLDRSYVGRIERGEVNITVEKLYRIAGELACDPSSL 66 Query: 67 L 67 L Sbjct: 67 L 67 >UniRef50_B0USW4 Putative prophage repressor n=2 Tax=Pasteurellaceae RepID=B0USW4_HAES2 Length = 228 Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 9/101 (8%) Query: 24 RSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFGDE---DKQPT---- 76 + +A LK++ +VS+W ++ P+ N + L+ L +P W+ FGD DK T Sbjct: 30 KQIADILKLTPKAVSKWFNAETMPSTANTYVLADFLSVTPEWLTFGDVKNFDKNATFVEV 89 Query: 77 -PPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVK 116 P+ LSP + N L +++ TQ + ++VK Sbjct: 90 VKSFYYPL-LSPVQAGYFTEVNLLSNTDEITQYEMISSQVK 129 >UniRef50_C7XUY0 Transcriptional regulator n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XUY0_9LACO Length = 110 Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/74 (28%), Positives = 39/74 (52%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 IG++I R + +Q LAKA+ S ++++WE G SEP+ + +++ S ++L Sbjct: 2 IGDKIHELRTQKRMSQTDLAKAIHASQQAITKWENGKSEPSSSVINSIANYFNVSTDYLL 61 Query: 68 FGDEDKQPTPPVEK 81 +K P + K Sbjct: 62 GRTSEKLPDKDLSK 75 >UniRef50_C9AUI7 Predicted protein n=3 Tax=Enterococcus casseliflavus RepID=C9AUI7_ENTCA Length = 135 Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 33/62 (53%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +TIGE ++ R + +Q +A + ++ S+S WE G + P NL LS + CS Sbjct: 1 MTIGEALKNHRVTQQMSQEEVATKILVTRTSISNWETGKTVPDSLNLLKLSTLYGCSVDE 60 Query: 66 IL 67 +L Sbjct: 61 LL 62 >UniRef50_A3V3P1 Transcriptional regulator, XRE family n=2 Tax=Rhodobacteraceae RepID=A3V3P1_9RHOB Length = 130 Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 34/71 (47%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 T G+R+ R+ +Q+ LAK+L + ++ WE EP L L+ +L S W+ Sbjct: 15 TFGDRLAGAREAAGLSQKDLAKSLGVKFATLVSWENDTGEPRANRLQMLAGMLGVSLGWL 74 Query: 67 LFGDEDKQPTP 77 + G D P Sbjct: 75 MTGLGDGLAAP 85 >UniRef50_C9BZU2 Phage CI repressor n=3 Tax=Enterococcus faecium RepID=C9BZU2_ENTFC Length = 105 Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 37/66 (56%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +TI + I+ +R + TQ LA+ L +S ++S WE G + P +NL +K+ S Sbjct: 1 MTISKVIKQKRIEKQLTQEDLAEMLLVSKKTISNWENGRTIPDTENLIQFAKLFDLSLDN 60 Query: 66 ILFGDE 71 IL G+E Sbjct: 61 ILLGEE 66 >UniRef50_C8WQU2 Transcriptional regulator, XRE family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WQU2_ALIAD Length = 106 Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust. Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 8/66 (12%) Query: 7 TIGERIRYRRKNLKH-TQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ----- 60 G R+R RK LKH TQ LA+AL +S ++ ERG +PT + A++ L Sbjct: 3 AFGRRLRAFRK-LKHMTQADLARALGVSLATIGGIERGTRQPTAHLVSAIASALSVDVEE 61 Query: 61 -CSPTW 65 C PTW Sbjct: 62 LCGPTW 67 >UniRef50_B4EV64 Fimbrial operon regulator n=4 Tax=Proteus mirabilis RepID=B4EV64_PROMH Length = 101 Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 38/67 (56%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M T N I RI +RK L T R +A +L+IS S+ E G ++ T ++LF+++ +L Sbjct: 1 MSTINSIIAYRIMQKRKELGMTGREIAHSLEISQQHYSRIENGHTKITVEHLFSIAFILG 60 Query: 61 CSPTWIL 67 P +L Sbjct: 61 VKPKELL 67 >UniRef50_A6NPM4 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NPM4_9BACE Length = 253 Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust. Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 2/80 (2%) Query: 15 RRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFGDEDKQ 74 R KNL TQ+ LA+ L +S +VS+WERG S P L ++ L + T +L G+ Sbjct: 18 REKNL--TQKELAERLFVSDKAVSKWERGLSLPDVGLLLPMADCLGVTVTELLRGERTAA 75 Query: 75 PTPPVEKPVALSPKELELLE 94 PVE+ AL L+L E Sbjct: 76 AQLPVEEVEALVKSTLQLTE 95 >UniRef50_B8H0Z2 Transcriptional regulator n=2 Tax=Caulobacter vibrioides RepID=B8H0Z2_CAUCN Length = 153 Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust. Identities = 20/68 (29%), Positives = 38/68 (55%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 ++ +G R+R RRK+L ++Q++LA AL ++ V ++E G + + L + L+ Sbjct: 32 DIHVGRRLRMRRKDLGYSQQALADALGLTFQQVQKYEGGSNRISASKLHGAAMFLKTPVA 91 Query: 65 WILFGDED 72 + G ED Sbjct: 92 FFFEGLED 99 >UniRef50_A9IWS2 Transcriptional regulator n=2 Tax=Bartonella RepID=A9IWS2_BART1 Length = 96 Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust. Identities = 22/63 (34%), Positives = 39/63 (61%), Gaps = 4/63 (6%) Query: 1 METKNLTI----GERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALS 56 M+ +NL I G+RIR+RRK LK +Q++L + L +S + ++E+G + + L +S Sbjct: 1 MQNQNLNIDLFVGKRIRFRRKMLKMSQKTLGQHLGVSFQQIQKYEKGLNRVSAGRLKEIS 60 Query: 57 KVL 59 +L Sbjct: 61 DIL 63 >UniRef50_A8S6P9 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S6P9_9FIRM Length = 134 Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 32/52 (61%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKV 58 ++ E ++ R K TQ +A+ + +S +VS+WE G SEP NL AL+++ Sbjct: 62 SLSEMLKENRTRCKMTQEFVAETIGVSRQAVSKWENGTSEPNTSNLMALARL 113 >UniRef50_B6FKN1 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FKN1_9CLOT Length = 101 Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 35/64 (54%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 L IG+RI+ R + K LA L I +S+ E G + T L+ +S++L CS + Sbjct: 15 LQIGQRIQKLRIDKKIAAVDLAAVLDIQSNQMSRIENGRANCTVPQLYVISQILGCSVDY 74 Query: 66 ILFG 69 +LFG Sbjct: 75 LLFG 78 >UniRef50_C0B6V1 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0B6V1_9FIRM Length = 316 Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust. Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 1/76 (1%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + IG+ I +RK L TQ+ LA+ L +S SVS+WERG P L +L+ S Sbjct: 4 IKIGKYIAEKRKALGLTQKQLAEKLNMSDKSVSKWERGICLPDVSIYMELCSILRISINE 63 Query: 66 ILFGDEDKQPTPPVEK 81 L G ED +EK Sbjct: 64 FLAG-EDIGAENVIEK 78 >UniRef50_UPI0001695282 hypothetical phagelike protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001695282 Length = 217 Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 1/62 (1%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKI-SHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 T GE I+ R+ TQ+ LA L + ++ ++++WE GD+ P GK++ LS+ + S + Sbjct: 3 TTGEIIKLLREQRGLTQQQLANILGLKTYTTITKWESGDNFPKGKDIKRLSEFFKVSSDY 62 Query: 66 IL 67 IL Sbjct: 63 IL 64 >UniRef50_C2IPU3 Putative uncharacterized protein n=1 Tax=Vibrio cholerae TMA 21 RepID=C2IPU3_VIBCH Length = 171 Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust. Identities = 20/73 (27%), Positives = 43/73 (58%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M+ N++IGE ++ RR L Q ++A+ + ++ ++ +WE+ +EP + LSK+L+ Sbjct: 1 MDYLNMSIGETLKNRRIELGIKQETIAEEMGVTVQTIYKWEKDTTEPKASQVSKLSKILR 60 Query: 61 CSPTWILFGDEDK 73 + I G +++ Sbjct: 61 LTEKEICQGKQEE 73 >UniRef50_B0NC49 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NC49_EUBSP Length = 94 Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 34/62 (54%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + I ++I+ R + TQ LAK L I+ SV+ WE G S P+ L LS++ S + Sbjct: 1 MMIADKIKQLRTSRDMTQSDLAKKLNITRSSVNAWEMGLSTPSTAYLVELSQLFHVSTDY 60 Query: 66 IL 67 +L Sbjct: 61 LL 62 >UniRef50_Q1GXR4 Transcriptional regulator, XRE family n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GXR4_METFK Length = 116 Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 5/97 (5%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 I ER++ R+ L +Q++LA L +S S +E G P G+ L A++ L +IL Sbjct: 4 IHERLKTEREALGLSQQALADQLGVSLRSQQNYEAGKRVPDGEYLAAIAS-LGADVLYIL 62 Query: 68 FGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQ 104 G + P E ALS + LLE F+A PE Q Sbjct: 63 TG--QRNSAAPAES--ALSKGDRVLLENFHAAPEQVQ 95 >UniRef50_Q0H244 Immunity repressor protein n=1 Tax=Geobacillus phage GBSV1 RepID=Q0H244_9CAUD Length = 148 Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Query: 10 ERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFG 69 +R+R RK TQ L + + ++ VS+S +E G+ P L AL+ L S ++L G Sbjct: 5 QRLRMLRKAKGLTQEELGRKVNVTKVSISGYESGNRTPDMDTLKALADALDVSIDYLL-G 63 Query: 70 DEDKQPT 76 ++ QPT Sbjct: 64 RDNTQPT 70 >UniRef50_Q1JZ74 Putative phage repressor n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZ74_DESAC Length = 230 Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 4/75 (5%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 TIGER+R+ R K A+ +S ++ ++E+G S P L A+ + L P W+ Sbjct: 23 TIGERLRFLRG--KQKLPDFAQRFGVSKSTLGRYEKGISLPDAGFLAAICQQLHVCPQWL 80 Query: 67 LFGDEDKQPTPPVEK 81 L G E +P P K Sbjct: 81 LMGGE--KPCQPFVK 93 >UniRef50_C8ZWK7 DNA binding protein n=4 Tax=Enterococcus RepID=C8ZWK7_ENTGA Length = 172 Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 2/76 (2%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + E+++ R+ +Q S+A+ LKIS S+S+WE G P NL LSK+ Q S Sbjct: 1 MALAEQLKLYREKSGLSQASVAEELKISRQSISKWENGRGYPDIDNLVLLSKLYQVSIDE 60 Query: 66 ILFGDEDKQPTPPVEK 81 +L E++Q ++K Sbjct: 61 LL--QENEQLKEQIQK 74 >UniRef50_B5K607 Transcriptional regulator, XRE family n=5 Tax=Rhodobacteraceae RepID=B5K607_9RHOB Length = 148 Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 37/78 (47%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 T G+R+ R + TQ+ LA+ + I ++ WE SEP L LS +L S W+ Sbjct: 34 TFGDRLAAARDVAQLTQKELAQRVGIKVSTLRNWEEDLSEPRANRLSILSGILGVSLRWL 93 Query: 67 LFGDEDKQPTPPVEKPVA 84 L + + P P+A Sbjct: 94 LTAEGEGLLAPDENAPIA 111 >UniRef50_C2R1U7 Putative uncharacterized protein n=3 Tax=Bacillus cereus group RepID=C2R1U7_BACCE Length = 274 Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust. Identities = 26/69 (37%), Positives = 37/69 (53%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + IG++I++ R K TQ +A L IS +S+WE G S P NL ALS + S Sbjct: 54 MDIGKKIKHLRLINKMTQEDVASQLFISRQVISKWELGKSLPDLTNLLALSNLFNVSIDS 113 Query: 66 ILFGDEDKQ 74 +L D + Q Sbjct: 114 LLKEDSNLQ 122 >UniRef50_C9XZQ4 26 kDa repressor protein n=1 Tax=Cronobacter turicensis RepID=C9XZQ4_CROTZ Length = 245 Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 2/96 (2%) Query: 2 ETKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQC 61 E + ER+ + +TQ +LAKA+ ++ SV++ G + +N AL+++L Sbjct: 16 EDLTMNFSERLAKAMADAGYTQGALAKAVGMAQSSVNKLLNGANGS--RNTVALARILGV 73 Query: 62 SPTWILFGDEDKQPTPPVEKPVALSPKELELLELFN 97 SP W+ G +P K A S ++ +E+F+ Sbjct: 74 SPEWLADGQGLMRPLTTERKSAAASGADVYRVEVFD 109 >UniRef50_C7N3U3 Predicted transcriptional regulator n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N3U3_SLAHD Length = 256 Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M G+ I+ RK+ TQ +A + ++ +VS+WERG++ P ++ AL K L Sbjct: 1 MPVDRAGFGKTIQALRKHASVTQGEVASRVGVTDKAVSKWERGEALPAAESFAALGKALN 60 Query: 61 CSPTWILF 68 P +LF Sbjct: 61 V-PALVLF 67 >UniRef50_D0RVK3 Phage transcriptional regulator n=1 Tax=Streptococcus sp. 2_1_36FAA RepID=D0RVK3_9STRE Length = 121 Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLF-ALSKVLQCSPT 64 + +GERI+ RRK LK + +L++ + +S ++ ++E+GD E G + ++ L SP Sbjct: 1 MNVGERIKQRRKELKMSADALSERVGVSRSTIFRYEKGDIEKVGPEVLKKIADTLNISPA 60 Query: 65 WIL 67 ++ Sbjct: 61 QLM 63 >UniRef50_C7H5C2 Toxin-antitoxin system, antitoxin component, Xre family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5C2_9FIRM Length = 100 Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 1/74 (1%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 +GER+ RK TQ++LA L IS S+ WE+G S P L A+ K+ S ++L Sbjct: 2 LGERLAELRKLNDDTQQTLADKLGISVWSIRAWEQGKSYPFSNVLLAICKLYGTSADYLL 61 Query: 68 FGDEDKQPTPPVEK 81 G D P+ K Sbjct: 62 -GLTDIDPSDEARK 74 >UniRef50_C1TL49 Predicted transcriptional regulator n=2 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL49_9BACT Length = 211 Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%) Query: 9 GERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILF 68 G ++ RK TQ+ LA + ++ ++ WE+ P G+NL +L+K L S +I+ Sbjct: 4 GNDLKRLRKEKGWTQQDLASRVGVTKTTILDWEKDRYSPVGQNLISLAKALNVSAAFIM- 62 Query: 69 GDEDKQPTP 77 E P+P Sbjct: 63 -GETNDPSP 70 >UniRef50_A4ND54 Probable transcription regulator n=2 Tax=Pasteurellaceae RepID=A4ND54_HAEIN Length = 237 Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust. Identities = 21/66 (31%), Positives = 39/66 (59%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 N +IG RIR R+ K ++ ++A+ L +S ++ WE +EP + L++ L+ SP Sbjct: 8 NSSIGNRIRELREFKKVSRNAMAEKLGLSLSALQNWETNQTEPVASMIITLAEELEVSPN 67 Query: 65 WILFGD 70 ++L G+ Sbjct: 68 YLLTGE 73 >UniRef50_B0SXV6 Transcriptional regulator, XRE family n=1 Tax=Caulobacter sp. K31 RepID=B0SXV6_CAUSK Length = 120 Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust. Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 9/91 (9%) Query: 15 RRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFGDEDKQ 74 RRK L +Q +LA AL ++ V ++ERG + + L+ ++K LQ ++ G D Sbjct: 2 RRKMLGVSQEALADALGLTFQQVQKYERGANRVSASKLYEIAKTLQVPVSYFFDGLADPM 61 Query: 75 PTPPVEKPVAL---------SPKELELLELF 96 E A +P+ LEL E+F Sbjct: 62 TNDVDEVGAAAERVVTEFLNTPEGLELAEMF 92 >UniRef50_B0K5Y3 Helix-turn-helix domain protein n=9 Tax=Thermoanaerobacter RepID=B0K5Y3_THEPX Length = 132 Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 6/101 (5%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 T+GERI+Y RK T +L+K +S ++S E S P+ L L L S W+ Sbjct: 3 TVGERIKYARKKNNLTITALSKLTGLSVGNLSDLENNKSMPSSNALIKLKNALNVSIDWL 62 Query: 67 LFGDEDKQPTPPV------EKPVALSPKELELLELFNALPE 101 L G + + E+ ++S K+ + + F LPE Sbjct: 63 LTGQQIEYVKEEEEKYLSREEFESISEKDKIIFKAFETLPE 103 >UniRef50_C6L9K9 DNA-binding protein n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L9K9_9FIRM Length = 257 Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust. Identities = 27/70 (38%), Positives = 38/70 (54%) Query: 2 ETKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQC 61 ET G + +RK K TQ+ LA+ L +S +VS+WERG S P L L++ L Sbjct: 3 ETGKEQFGRFVAQQRKKKKLTQKELAQKLYVSDKAVSKWERGSSMPDIALLTPLAEALGV 62 Query: 62 SPTWILFGDE 71 + T +L G E Sbjct: 63 TVTELLEGKE 72 >UniRef50_UPI0001C35F8B hypothetical protein ChatD1_28899 n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35F8B Length = 200 Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 34/57 (59%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 +++GE I+ +R LK +Q +A+ L +S +VS+WE S+P KNL L+ V Sbjct: 1 MSLGENIKTKRNELKLSQEYVAEQLGVSRQAVSKWETDQSQPKAKNLTELATVFHVG 57 >UniRef50_B9J6N5 Transcriptional regulator n=1 Tax=Bacillus cereus Q1 RepID=B9J6N5_BACCQ Length = 108 Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 29/56 (51%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 T+GER+ Y RKN K Q +A L ++ + + WE G +EP L +S S Sbjct: 3 TLGERLLYFRKNRKLRQEDIADHLNVARATYTNWEAGRAEPDIATLIKISDFYTIS 58 >UniRef50_C0AWV5 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0AWV5_9ENTR Length = 102 Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 36/75 (48%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M N +G+RI+ +RK LK T + + L IS S+ E G + T L +S +L Sbjct: 1 MSELNTIVGQRIKQKRKQLKLTGIEMGRRLGISQQHYSRLENGHIKITVDQLITISYILG 60 Query: 61 CSPTWILFGDEDKQP 75 SP +L E P Sbjct: 61 ISPQSLLLTSETMSP 75 >UniRef50_C0EBZ8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0EBZ8_9CLOT Length = 172 Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 42/71 (59%), Gaps = 1/71 (1%) Query: 10 ERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFG 69 E+I+ RK + +Q LA+ + +S ++++WE G + P + + +LS+ + S ++L Sbjct: 12 EKIQRERKKMGLSQEKLAEKIGVSRQAITKWENGLASPELEKIVSLSECFKVSTDYLL-K 70 Query: 70 DEDKQPTPPVE 80 D +PTPP E Sbjct: 71 DNITEPTPPQE 81 >UniRef50_D2LZS5 Transcriptional regulator, XRE family n=2 Tax=Bacillus RepID=D2LZS5_BACS4 Length = 207 Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust. Identities = 18/56 (32%), Positives = 35/56 (62%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQC 61 +++G I +RK+L +Q +A L +S +VS+WE S+P+ +NL ++ + +C Sbjct: 1 MSLGSNINNKRKSLNLSQEYVADQLGVSRQAVSKWENNLSKPSTQNLIKMATLFEC 56 >UniRef50_C3RRC1 DNA-binding protein n=3 Tax=Bacteria RepID=C3RRC1_9MOLU Length = 344 Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust. Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 1/67 (1%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + I E I+ +R L +TQ LAK L ++ +V++WERG S P L AL+++L+ Sbjct: 1 MKINEIIKEKRLALGYTQEQLAKFLNLTTPAVNKWERGISYPDITILPALARILKTDLNT 60 Query: 66 IL-FGDE 71 +L F D+ Sbjct: 61 LLSFKDD 67 >UniRef50_B9YAR3 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAR3_9FIRM Length = 174 Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust. Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 4/99 (4%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 L++GE +R R+ +Q +L + L +S ++S++E +EP LF ++++ + Sbjct: 17 LSLGENLRLLREERGISQEALGQDLSLSDGAISRYENNAAEPDINTLFGMAEIFGVDFNY 76 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQ 104 +L D + + L K++ELL F+ Q Sbjct: 77 LL----DYHGHVRKSQDIVLQNKDVELLTCFHQCSSGHQ 111 >UniRef50_B4ESL5 Phage reprossor n=2 Tax=Enterobacteriaceae RepID=B4ESL5_PROMH Length = 233 Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 9/97 (9%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 T+ ERI+ R TQ LA+ + +S SV QWE +EP + ++++L+ W+ Sbjct: 3 TMRERIKQARLAKNMTQAELAELVGVSPQSVQQWETS-TEPRKNRVIKIAEILEVDTNWL 61 Query: 67 LFGDED-----KQPTPPVEKPVALSPK---ELELLEL 95 LFG D K + + + + +S K ++E+L++ Sbjct: 62 LFGITDIDERNKVSSIQINQDIEVSDKNTYKVEMLDI 98 >UniRef50_C6IXM6 SOS-response transcriptional repressor n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IXM6_9BACL Length = 290 Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 35/65 (53%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 +GERI+ R T R L + ++ ++S+ E+G T +NLFA+S+ S W+ Sbjct: 7 ALGERIKKCRLEKGMTLRELGSQVGMTSSALSKVEKGSVSITSENLFAISEAFGVSVDWL 66 Query: 67 LFGDE 71 L G E Sbjct: 67 LTGKE 71 >UniRef50_D0J194 Transcriptional regulator, XRE family n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0J194_COMTE Length = 131 Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 5/91 (5%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +T+GER+R R L +Q + A + ++ WE G + P G + ALS + Sbjct: 1 MTLGERLREERNRLGMSQPAFAALAGTTKQTLFSWESGKTAPDGFQMTALS-AHGVDLLY 59 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELF 96 +L G TP V ALS EL LL + Sbjct: 60 VLAG----HRTPAVHPAEALSDDELRLLHGY 86 >UniRef50_C6J5T6 Helix-turn-helix domain-containing protein n=2 Tax=Bacillales RepID=C6J5T6_9BACL Length = 120 Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust. Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 13/130 (10%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 ++I ERI KN T+++ L IS + W+RG S P+ L ++ S W Sbjct: 1 MSIYERIELLIKNAGMTKKAFCLELGISTGNFGDWKRGKSTPSTNKLIEIAAFFDVSLDW 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEEL 125 ++ G E KQ ++ + + + L E+E RA V+ + E Sbjct: 61 LMTGKE-KQAEYVQDQRTEYISTDKDWISFIGTLTEAE--------RAFVREYI----EF 107 Query: 126 LKARQRTNKR 135 ++ R+R + R Sbjct: 108 VRYRRRKSGR 117 >UniRef50_Q4KKB9 DNA-binding protein, putative n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KKB9_PSEF5 Length = 120 Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust. Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%) Query: 4 KNLT-IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 +N+T ER+R RK +Q L + ++ + + ++ERG S P+G L L+ L S Sbjct: 3 ENITGFAERLRSLRKQKNLSQTELGQLAELHYTHIGRYERGTSRPSGDTLKRLADALDVS 62 Query: 63 PTWILFGDEDKQPTPPVE 80 ++L G D E Sbjct: 63 SDYLLEGASDDAAKAKFE 80 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P06966 HTH-type transcriptional regulator dicA n=10 Tax... 180 1e-44 UniRef50_C8TRW1 Predicted phage repressor CI n=30 Tax=Enterobact... 140 1e-32 UniRef50_D2U099 Phage transcriptional regulator n=1 Tax=Arsenoph... 120 1e-26 UniRef50_C7BH54 Similar to dica, regulator of dicb encoded by pr... 104 1e-21 UniRef50_D2U4L3 Phage transcriptional regulator n=1 Tax=Arsenoph... 104 1e-21 UniRef50_D2TVN8 Phage transcriptional regulator n=1 Tax=Arsenoph... 103 2e-21 UniRef50_B5EK35 Transcriptional regulator, XRE family n=2 Tax=Ac... 101 5e-21 UniRef50_B5R8N7 Predicted phage regulatory protein n=9 Tax=Enter... 101 8e-21 UniRef50_Q5LR46 DNA-binding protein, putative n=1 Tax=Ruegeria p... 99 2e-20 UniRef50_A1JLW6 Putative DNA-binding protein n=1 Tax=Yersinia en... 99 5e-20 UniRef50_C5EI29 Predicted protein n=1 Tax=Clostridiales bacteriu... 98 9e-20 UniRef50_C6M778 HTH-type transcriptional regulator DicA n=1 Tax=... 98 1e-19 UniRef50_B9Z4Y0 Transcriptional regulator, XRE family n=1 Tax=Lu... 97 1e-19 UniRef50_A8VQI9 Putative transcriptional regulator, XRE family n... 97 1e-19 UniRef50_D2U1N5 Phage transcriptional regulator n=1 Tax=Arsenoph... 97 2e-19 UniRef50_C2HKP6 XRE family transcriptional regulator n=2 Tax=Lac... 96 3e-19 UniRef50_P69202 Repressor protein C2 n=23 Tax=root RepID=RPC2_BPP22 96 3e-19 UniRef50_C4X6V4 Putative repressor protein of prophage n=2 Tax=E... 95 6e-19 UniRef50_D2TX49 Phage transcriptional regulator n=1 Tax=Arsenoph... 95 7e-19 UniRef50_A4SLB7 Phage repressor n=1 Tax=Aeromonas salmonicida su... 95 8e-19 UniRef50_D2U0V0 Phage transcriptional regulator n=1 Tax=Arsenoph... 94 1e-18 UniRef50_Q12J32 Transciptional regulator n=10 Tax=Shewanella Rep... 94 2e-18 UniRef50_C8WL34 Transcriptional regulator, XRE family n=1 Tax=Eg... 93 2e-18 UniRef50_D0C932 Cro/CI family transcriptional regulator n=8 Tax=... 93 3e-18 UniRef50_B6AW67 Transcriptional regulator, XRE family n=1 Tax=Rh... 92 6e-18 UniRef50_Q5E364 Transcriptional repressor, Cro/CI family n=1 Tax... 92 6e-18 UniRef50_B4ETH6 Putative phage repressor n=1 Tax=Proteus mirabil... 92 7e-18 UniRef50_C8TM97 Predicted phage repressor protein n=15 Tax=Esche... 91 9e-18 UniRef50_A7JPM0 Possible LexA family repressor/S24 family protea... 91 1e-17 UniRef50_A9NHP5 Membrane-anchored DNA-binding protein, putative ... 91 1e-17 UniRef50_D2TX37 Phage transcriptional regulator n=1 Tax=Arsenoph... 91 1e-17 UniRef50_Q6J1N3 Putative prophage repressor protein n=1 Tax=Burk... 90 2e-17 UniRef50_UPI0001C3512F putative transcriptional regulator n=1 Ta... 90 2e-17 UniRef50_B0SWF3 Transcriptional regulator, XRE family n=2 Tax=Ca... 89 3e-17 UniRef50_C6LAG2 DNA-binding protein n=1 Tax=Bryantella formatexi... 89 4e-17 UniRef50_A0YEC5 Putative uncharacterized protein n=1 Tax=marine ... 89 4e-17 UniRef50_Q4L9W0 Similar to unknown protein n=4 Tax=Staphylococcu... 88 6e-17 UniRef50_Q1YI68 Putative transcriptional regulator n=1 Tax=Auran... 88 7e-17 UniRef50_Q5ZTV2 Hypothetical phage repressor n=1 Tax=Legionella ... 88 8e-17 UniRef50_Q5L2Q2 Transcriptional regulator n=3 Tax=Geobacillus ka... 88 9e-17 UniRef50_B6G1K3 Putative uncharacterized protein n=1 Tax=Clostri... 88 9e-17 UniRef50_A0RLU0 Transcriptional regulator n=7 Tax=Bacillus RepID... 88 9e-17 UniRef50_C6J5N1 Predicted protein n=1 Tax=Paenibacillus sp. oral... 87 2e-16 UniRef50_B8EFW1 Putative phage repressor n=1 Tax=Shewanella balt... 87 2e-16 UniRef50_B0UWI4 Putative phage repressor n=1 Tax=Haemophilus som... 87 2e-16 UniRef50_B0NKE5 Putative uncharacterized protein n=3 Tax=Firmicu... 86 2e-16 UniRef50_Q5FQ46 Putative uncharacterized protein n=1 Tax=Glucono... 86 2e-16 UniRef50_B5UTN8 Transcriptional regulator Xre n=10 Tax=Bacillus ... 86 3e-16 UniRef50_C9XPP6 Putative phage regulatory protein n=5 Tax=Clostr... 86 3e-16 UniRef50_A1ACF7 Putative transcriptional regulator n=9 Tax=Enter... 86 3e-16 UniRef50_C7N0U4 Predicted transcriptional regulator n=1 Tax=Slac... 86 4e-16 UniRef50_A6WVE6 Putative phage repressor n=1 Tax=Ochrobactrum an... 85 6e-16 UniRef50_Q2RSF5 Transcriptional regulator, XRE family n=1 Tax=Rh... 85 6e-16 UniRef50_B4RHZ2 Transcriptional regulator, Cro/CI family n=2 Tax... 85 6e-16 UniRef50_C3LHJ4 Prophage LambdaBa02, repressor protein n=12 Tax=... 85 7e-16 UniRef50_Q896S6 Putative transcriptional regulator n=1 Tax=Clost... 85 7e-16 UniRef50_C6IZ53 Predicted protein n=1 Tax=Paenibacillus sp. oral... 85 8e-16 UniRef50_A3ICU1 Putative uncharacterized protein n=1 Tax=Bacillu... 84 1e-15 UniRef50_B4RE45 Transcriptional regulator, Cro/CI family n=1 Tax... 84 1e-15 UniRef50_Q97IR2 Predicted transcriptional regulator n=1 Tax=Clos... 84 1e-15 UniRef50_Q044U1 Transcriptional regulator, xre family n=4 Tax=ro... 84 1e-15 UniRef50_Q3AB02 DNA-binding protein n=2 Tax=Clostridia RepID=Q3A... 84 2e-15 UniRef50_C3RJ47 Predicted protein n=2 Tax=Bacteria RepID=C3RJ47_... 83 2e-15 UniRef50_A7JUV7 Putative uncharacterized protein n=1 Tax=Mannhei... 83 2e-15 UniRef50_C7HWC9 Transcriptional regulator n=2 Tax=Anaerococcus R... 83 2e-15 UniRef50_B2TZ32 Helix-turn-helix domain protein n=4 Tax=root Rep... 83 2e-15 UniRef50_C6PS92 Transcriptional regulator, XRE family n=1 Tax=Cl... 83 3e-15 UniRef50_C4G5J1 Putative uncharacterized protein n=1 Tax=Abiotro... 83 3e-15 UniRef50_B3IN07 Repressor protein C2 n=2 Tax=Escherichia coli Re... 83 3e-15 UniRef50_A7VII3 Putative uncharacterized protein n=1 Tax=Clostri... 83 3e-15 UniRef50_A9L6K9 Putative phage repressor n=1 Tax=Shewanella balt... 83 3e-15 UniRef50_Q7N301 Similar to bacteriophage repressor protein CI n=... 83 3e-15 UniRef50_D2U1N2 Phage transcriptional regulator n=1 Tax=Arsenoph... 83 3e-15 UniRef50_A7FIY9 Repressor protein C2 n=2 Tax=Yersinia RepID=A7FI... 83 3e-15 UniRef50_Q2W6H5 Predicted transcriptional regulator n=14 Tax=Alp... 83 4e-15 UniRef50_Q8DUT3 Putative uncharacterized protein n=3 Tax=Firmicu... 82 4e-15 UniRef50_B7LNL7 Repressor protein C2 n=5 Tax=Enterobacteriaceae ... 82 5e-15 UniRef50_B3G141 Hypothetical bacteriophage protein n=1 Tax=Pseud... 82 5e-15 UniRef50_Q5DY86 DNA-binding protein RDGA n=1 Tax=Vibrio fischeri... 82 6e-15 UniRef50_B0T4G6 Transcriptional regulator, XRE family n=20 Tax=c... 82 6e-15 UniRef50_Q1NQ27 Helix-turn-helix motif n=1 Tax=delta proteobacte... 81 7e-15 UniRef50_C9A4E1 Predicted protein n=3 Tax=Enterococcus casselifl... 81 1e-14 UniRef50_Q28NZ2 Transcriptional regulator, XRE family n=1 Tax=Ja... 81 1e-14 UniRef50_B8GUZ2 Putative uncharacterized protein n=1 Tax=Thioalk... 81 1e-14 UniRef50_B6GDK8 Putative uncharacterized protein n=1 Tax=Collins... 81 1e-14 UniRef50_A9IYN4 Transcriptional regulator n=14 Tax=Bartonella Re... 81 1e-14 UniRef50_B6ET56 Putative peptidase, S24-like n=1 Tax=Aliivibrio ... 81 1e-14 UniRef50_C6JFU4 Predicted protein n=1 Tax=Ruminococcus sp. 5_1_3... 81 1e-14 UniRef50_D2U4K8 Phage transcriptional regulator n=1 Tax=Arsenoph... 81 1e-14 UniRef50_C8WKX0 Transcriptional regulator, XRE family n=1 Tax=Eg... 80 1e-14 UniRef50_D2MI64 Prophage repressor n=2 Tax=Candidatus Poribacter... 80 2e-14 UniRef50_A8UD60 DNA-binding protein n=2 Tax=Carnobacterium sp. A... 80 2e-14 UniRef50_Q70CB1 Putative transcriptional regulator n=2 Tax=Strep... 80 2e-14 UniRef50_B8FWP9 Transcriptional regulator, XRE family n=2 Tax=De... 80 2e-14 UniRef50_C2KY20 Putative uncharacterized protein n=1 Tax=Oribact... 80 2e-14 UniRef50_A8RWL6 Putative uncharacterized protein n=1 Tax=Clostri... 80 2e-14 UniRef50_A8RQA3 Putative uncharacterized protein n=1 Tax=Clostri... 80 2e-14 UniRef50_Q2RLS7 Transcriptional regulator, XRE family n=1 Tax=Mo... 80 2e-14 UniRef50_Q6UAU6 Gp36 n=2 Tax=Siphoviridae RepID=Q6UAU6_9CAUD 80 2e-14 UniRef50_A3CPI8 Transcriptional regulator, XRE family, putative ... 80 2e-14 UniRef50_C4F7R9 Putative uncharacterized protein n=1 Tax=Collins... 80 3e-14 UniRef50_C4ZER3 Putative uncharacterized protein n=4 Tax=Firmicu... 80 3e-14 UniRef50_C3DY68 Helix-turn-helix domain protein n=1 Tax=Bacillus... 79 3e-14 UniRef50_A2UZN6 Transcriptional regulator, XRE family n=1 Tax=Sh... 79 3e-14 UniRef50_Q161J2 Helix-turn-helix domain protein, putative n=19 T... 79 3e-14 UniRef50_A3CR12 Transcriptional regulator, XRE family, putative ... 79 4e-14 UniRef50_A7DV91 DNA-binding protein RDGA n=1 Tax=Vibrio vulnific... 79 4e-14 UniRef50_P96631 HTH-type transcriptional regulator immR n=1 Tax=... 79 4e-14 UniRef50_B9WVI7 Transcriptional regulator, XRE family n=1 Tax=St... 79 4e-14 UniRef50_C9BLS2 Helix-turn-helix domain-containing protein n=6 T... 79 5e-14 UniRef50_C2Q4Y2 Putative uncharacterized protein n=1 Tax=Bacillu... 79 5e-14 UniRef50_B9QVC7 Bacteriophage CI repressor protein, putative n=2... 79 5e-14 UniRef50_A8RI36 Putative uncharacterized protein n=1 Tax=Clostri... 78 6e-14 UniRef50_C3X9A6 Predicted protein n=2 Tax=Oxalobacter formigenes... 78 6e-14 UniRef50_C9AY67 Predicted protein n=4 Tax=Enterococcus RepID=C9A... 78 6e-14 UniRef50_Q2Y8T7 Transcriptional regulator, XRE family n=1 Tax=Ni... 78 7e-14 Sequences not found previously or not previously below threshold: UniRef50_C7IG82 Transcriptional regulator, XRE family n=1 Tax=Cl... 93 2e-18 UniRef50_C2HM44 Helix-turn-helix motif protein n=2 Tax=Lactobaci... 92 6e-18 UniRef50_A6P0Y3 Putative uncharacterized protein n=1 Tax=Bactero... 92 8e-18 UniRef50_B0P2E7 Putative uncharacterized protein n=4 Tax=Firmicu... 91 8e-18 UniRef50_C0EID5 Putative uncharacterized protein n=2 Tax=Clostri... 91 1e-17 UniRef50_A6NYY1 Putative uncharacterized protein n=2 Tax=Bacteri... 89 5e-17 UniRef50_C2L015 Transcriptional regulator n=10 Tax=Firmicutes Re... 89 5e-17 UniRef50_A3CL00 Transcriptional regulator, XRE family, putative ... 88 6e-17 UniRef50_A6NZ66 Putative uncharacterized protein n=1 Tax=Bactero... 88 8e-17 UniRef50_B1KN13 Transcriptional regulator, XRE family n=1 Tax=Sh... 88 8e-17 UniRef50_C2HK27 Helix-turn-helix motif protein n=1 Tax=Finegoldi... 87 2e-16 UniRef50_Q046H9 Transcriptional regulator, xre family n=7 Tax=La... 86 2e-16 UniRef50_B7DU45 Transcriptional regulator, XRE family n=1 Tax=Al... 86 2e-16 UniRef50_B8CKR7 Helix-turn-helix motif protein n=1 Tax=Shewanell... 86 2e-16 UniRef50_A7B4H5 Putative uncharacterized protein n=1 Tax=Ruminoc... 86 3e-16 UniRef50_C3RPR9 Predicted protein n=2 Tax=Bacteria RepID=C3RPR9_... 86 3e-16 UniRef50_C0CR55 Putative uncharacterized protein n=2 Tax=Firmicu... 86 4e-16 UniRef50_D1PIW7 Toxin-antitoxin system, antitoxin component, Xre... 85 5e-16 UniRef50_C9LBV6 Putative helix-turn-helix protein n=1 Tax=Blauti... 85 6e-16 UniRef50_B0MLS3 Putative uncharacterized protein n=1 Tax=Eubacte... 85 6e-16 UniRef50_B5CMT0 Putative uncharacterized protein n=4 Tax=Firmicu... 85 6e-16 UniRef50_A6P2G2 Putative uncharacterized protein n=1 Tax=Bactero... 85 6e-16 UniRef50_C5EIJ5 Putative uncharacterized protein n=1 Tax=Clostri... 85 7e-16 UniRef50_C3BBP1 Putative uncharacterized protein n=2 Tax=Bacillu... 85 9e-16 UniRef50_B1SC98 Putative uncharacterized protein n=1 Tax=Strepto... 85 9e-16 UniRef50_C0C4Y4 Putative uncharacterized protein n=1 Tax=Clostri... 85 9e-16 UniRef50_B6GE04 Putative uncharacterized protein n=1 Tax=Collins... 85 1e-15 UniRef50_B6FTX3 Putative uncharacterized protein n=1 Tax=Clostri... 85 1e-15 UniRef50_B0MS43 Putative uncharacterized protein n=1 Tax=Eubacte... 84 1e-15 UniRef50_Q0AWQ8 Putative transcriptional regulator, XRE family n... 84 1e-15 UniRef50_A8SNW9 Putative uncharacterized protein n=1 Tax=Coproco... 84 1e-15 UniRef50_UPI0001C37439 XRE family transcriptional regulator n=1 ... 84 1e-15 UniRef50_C8W889 Transcriptional regulator, XRE family n=2 Tax=At... 84 1e-15 UniRef50_A8RFR8 Putative uncharacterized protein n=1 Tax=Eubacte... 84 2e-15 UniRef50_A4E806 Putative uncharacterized protein n=1 Tax=Collins... 84 2e-15 UniRef50_B9Y7G8 Putative uncharacterized protein n=2 Tax=Firmicu... 84 2e-15 UniRef50_B7C9Y7 Putative uncharacterized protein n=1 Tax=Eubacte... 83 2e-15 UniRef50_B5YSQ0 Putative repressor protein n=16 Tax=Escherichia ... 83 2e-15 UniRef50_B1R6G0 Helix-turn-helix domain protein n=3 Tax=Clostrid... 83 2e-15 UniRef50_C0EBZ8 Putative uncharacterized protein n=2 Tax=Clostri... 83 2e-15 UniRef50_A9KS31 Transcriptional regulator, XRE family n=1 Tax=Cl... 83 2e-15 UniRef50_A6NW39 Putative uncharacterized protein n=1 Tax=Bactero... 83 2e-15 UniRef50_B7DTD3 Transcriptional regulator, XRE family n=1 Tax=Al... 83 2e-15 UniRef50_A6NZN1 Putative uncharacterized protein n=1 Tax=Bactero... 83 3e-15 UniRef50_C6LAB0 Putative helix-turn-helix protein n=1 Tax=Bryant... 83 3e-15 UniRef50_C0FPM6 Putative uncharacterized protein n=1 Tax=Rosebur... 83 3e-15 UniRef50_B0NE21 Putative uncharacterized protein n=1 Tax=Clostri... 83 3e-15 UniRef50_Q28T13 Transcriptional regulator, XRE family n=20 Tax=R... 83 3e-15 UniRef50_B1C9S1 Putative uncharacterized protein n=1 Tax=Anaerof... 83 3e-15 UniRef50_B9YDL2 Putative uncharacterized protein n=1 Tax=Holdema... 83 3e-15 UniRef50_C8W874 Transcriptional regulator, XRE family n=2 Tax=At... 83 3e-15 UniRef50_Q1CP27 Transcriptional regulator, Cro/CI family n=8 Tax... 83 3e-15 UniRef50_C6JQJ3 Putative uncharacterized protein n=2 Tax=Fusobac... 83 3e-15 UniRef50_C7GAS5 DNA-binding protein n=6 Tax=Clostridiales RepID=... 83 4e-15 UniRef50_D2LZS5 Transcriptional regulator, XRE family n=2 Tax=Ba... 83 4e-15 UniRef50_C7N384 Predicted transcriptional regulator n=1 Tax=Slac... 82 4e-15 UniRef50_B8FXI2 Transcriptional regulator, XRE family n=2 Tax=De... 82 5e-15 UniRef50_B1C771 Putative uncharacterized protein n=1 Tax=Anaerof... 82 5e-15 UniRef50_C7N6T3 Predicted transcriptional regulator n=1 Tax=Slac... 82 5e-15 UniRef50_A4WB55 Transcriptional regulator, XRE family n=8 Tax=En... 82 5e-15 UniRef50_B1CBT7 Putative uncharacterized protein n=1 Tax=Anaerof... 82 5e-15 UniRef50_A8SXS8 Putative uncharacterized protein n=1 Tax=Coproco... 82 5e-15 UniRef50_B4ESL5 Phage reprossor n=2 Tax=Enterobacteriaceae RepID... 82 5e-15 UniRef50_B6GBG4 Putative uncharacterized protein n=2 Tax=Collins... 82 5e-15 UniRef50_A6NPM4 Putative uncharacterized protein n=1 Tax=Bactero... 82 6e-15 UniRef50_C4F7J1 Putative uncharacterized protein n=1 Tax=Collins... 82 6e-15 UniRef50_C7H2U3 Putative helix-turn-helix protein n=1 Tax=Faecal... 82 6e-15 UniRef50_B7AVZ0 Putative uncharacterized protein n=1 Tax=Bactero... 81 7e-15 UniRef50_C7G7I6 Toxin-antitoxin system, antitoxin component, Xre... 81 7e-15 UniRef50_A9VI55 Transcriptional regulator, XRE family n=68 Tax=B... 81 9e-15 UniRef50_UPI0001C36E3B hypothetical protein RflaF_04317 n=1 Tax=... 81 9e-15 UniRef50_C3RNM0 Predicted protein n=3 Tax=Bacteria RepID=C3RNM0_... 81 9e-15 UniRef50_C5WHH0 Putative uncharacterized protein n=4 Tax=Firmicu... 81 1e-14 UniRef50_C7GBK6 Transcriptional regulator of NagC/XylR family, s... 81 1e-14 UniRef50_C2CXS6 Transcription regulator n=1 Tax=Lactobacillus br... 81 1e-14 UniRef50_B4W5L7 Helix-turn-helix domain protein n=2 Tax=Brevundi... 81 1e-14 UniRef50_C6IXM6 SOS-response transcriptional repressor n=1 Tax=P... 81 1e-14 UniRef50_C0VYQ4 Possible transcriptional regulator n=1 Tax=Actin... 81 1e-14 UniRef50_A8Z5P9 DNA-binding protein n=35 Tax=Staphylococcus RepI... 81 1e-14 UniRef50_C7H8I0 SOS-response transcriptional repressor n=4 Tax=R... 81 1e-14 UniRef50_UPI000196AC79 hypothetical protein CATMIT_01178 n=1 Tax... 81 1e-14 UniRef50_B3XM16 Transcriptional regulator, XRE family n=1 Tax=La... 81 1e-14 UniRef50_C2KZU8 Helix-turn-helix motif protein n=3 Tax=Firmicute... 81 1e-14 UniRef50_A9KHQ0 Transcriptional regulator, XRE family n=1 Tax=Cl... 81 1e-14 UniRef50_C5A7V6 Putative phage repressor n=1 Tax=Burkholderia gl... 81 1e-14 UniRef50_C7XUY0 Transcriptional regulator n=1 Tax=Lactobacillus ... 81 1e-14 UniRef50_C4F7U6 Putative uncharacterized protein n=2 Tax=Collins... 81 1e-14 UniRef50_C3WDT3 Transcriptional regulator n=1 Tax=Fusobacterium ... 81 1e-14 UniRef50_UPI0001C364C2 helix-turn-helix domain-containing protei... 81 1e-14 UniRef50_B9YYS9 Putative phage repressor n=1 Tax=Lutiella nitrof... 80 2e-14 UniRef50_B1C3C9 Putative uncharacterized protein n=1 Tax=Clostri... 80 2e-14 UniRef50_D1P3I7 Toxin-antitoxin system, antitoxin component, Xre... 80 2e-14 UniRef50_Q88UM2 Prophage Lp2 protein 9 n=1 Tax=Lactobacillus pla... 80 2e-14 UniRef50_A5KM56 Putative uncharacterized protein n=1 Tax=Ruminoc... 80 2e-14 UniRef50_A4VWF1 Putative uncharacterized protein n=8 Tax=Lactoba... 80 2e-14 UniRef50_A8SS10 Putative uncharacterized protein n=1 Tax=Coproco... 80 2e-14 UniRef50_D1NZ39 Toxin-antitoxin system, antitoxin component, Xre... 80 2e-14 UniRef50_C0BEF9 Putative uncharacterized protein n=2 Tax=Clostri... 80 2e-14 UniRef50_B7I085 Helix-turn-helix domain protein n=48 Tax=Bacilla... 80 2e-14 UniRef50_A7ILE3 Transcriptional regulator, XRE family n=1 Tax=Xa... 80 2e-14 UniRef50_A6NZM6 Putative uncharacterized protein n=1 Tax=Bactero... 80 2e-14 UniRef50_Q5FSV4 Transcriptional regulator n=1 Tax=Gluconobacter ... 80 2e-14 UniRef50_A4EAV3 Putative uncharacterized protein n=1 Tax=Collins... 80 2e-14 UniRef50_C7XXQ9 Transcriptional regulator n=2 Tax=Lactobacillus ... 80 2e-14 UniRef50_C6L9K9 DNA-binding protein n=1 Tax=Bryantella formatexi... 80 3e-14 UniRef50_B6IN19 DNA-binding protein, putative n=1 Tax=Rhodospiri... 80 3e-14 UniRef50_B6GAN7 Putative uncharacterized protein n=1 Tax=Collins... 80 3e-14 UniRef50_A4VYH7 Predicted transcriptional regulator n=8 Tax=Stre... 80 3e-14 UniRef50_C9L3X9 Toxin-antitoxin system, antitoxin component, Xre... 80 3e-14 UniRef50_Q3ABG7 Putative prophage LambdaCh01, repressor protein ... 80 3e-14 UniRef50_C0Z6E6 Putative DNA-binding protein n=1 Tax=Brevibacill... 80 3e-14 UniRef50_C0ZFK5 Putative DNA-binding protein n=1 Tax=Brevibacill... 80 3e-14 UniRef50_C9A6X0 Putative uncharacterized protein n=3 Tax=Enteroc... 80 3e-14 UniRef50_C9RC67 Transcriptional regulator, XRE family n=1 Tax=Am... 80 3e-14 UniRef50_UPI0001C35F8B hypothetical protein ChatD1_28899 n=1 Tax... 80 3e-14 UniRef50_A7VTE0 Putative uncharacterized protein n=1 Tax=Clostri... 79 3e-14 UniRef50_B4X5D8 Helix-turn-helix domain protein n=2 Tax=Alcanivo... 79 3e-14 UniRef50_C7JC38 Transcriptional regulator n=8 Tax=Acetobacter pa... 79 4e-14 UniRef50_A9KQE6 Transcriptional regulator, XRE family n=1 Tax=Cl... 79 4e-14 UniRef50_Q3ERK0 Transcriptional regulator, MerR family n=2 Tax=B... 79 4e-14 UniRef50_D0DT23 Transcriptional regulator n=1 Tax=Lactobacillus ... 79 4e-14 UniRef50_C5QAP5 Transcriptional regulator n=3 Tax=Staphylococcus... 79 4e-14 UniRef50_C5N0R4 Cro/CI family transcriptional regulator n=24 Tax... 79 5e-14 UniRef50_A9KQH8 Transcriptional regulator, XRE family n=1 Tax=Cl... 79 5e-14 UniRef50_C0FPE4 Putative uncharacterized protein n=2 Tax=Rosebur... 79 6e-14 UniRef50_B9WW72 Transcriptional regulator, XRE family n=1 Tax=St... 78 6e-14 UniRef50_C2E976 Transcriptional regulator n=1 Tax=Lactobacillus ... 78 6e-14 UniRef50_B6B2C5 Transcriptional regulator, XRE family n=6 Tax=Rh... 78 6e-14 UniRef50_D1BQX9 Transcriptional regulator, XRE family n=2 Tax=Ve... 78 6e-14 UniRef50_B1CA13 Putative uncharacterized protein n=1 Tax=Anaerof... 78 6e-14 UniRef50_C0D7S1 Putative uncharacterized protein n=1 Tax=Clostri... 78 6e-14 UniRef50_C2D5V7 XRE family transcriptional regulator n=1 Tax=Lac... 78 7e-14 UniRef50_C8P9Q6 DNA-binding protein n=2 Tax=Lactobacillus RepID=... 78 7e-14 UniRef50_B6WXX6 Putative uncharacterized protein n=1 Tax=Desulfo... 78 7e-14 >UniRef50_P06966 HTH-type transcriptional regulator dicA n=10 Tax=Enterobacteriaceae RepID=DICA_ECOLI Length = 135 Score = 180 bits (456), Expect = 1e-44, Method: Composition-based stats. Identities = 135/135 (100%), Positives = 135/135 (100%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ Sbjct: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 Query: 61 CSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNK 120 CSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNK Sbjct: 61 CSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNK 120 Query: 121 LFEELLKARQRTNKR 135 LFEELLKARQRTNKR Sbjct: 121 LFEELLKARQRTNKR 135 >UniRef50_C8TRW1 Predicted phage repressor CI n=30 Tax=Enterobacteriaceae RepID=C8TRW1_ECO26 Length = 135 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 73/135 (54%), Positives = 96/135 (71%), Gaps = 2/135 (1%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 T+G+RIR RRK + +Q L+KA +S S+S WE + P G+NL L++VLQCS Sbjct: 1 MNEKTLGQRIRERRKQVGLSQNGLSKAAGVSGSSISLWESDHTAPRGQNLHRLAEVLQCS 60 Query: 63 PTWILFGDEDKQPTPPV--EKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNK 120 PTWILFGDEDK P PPV + + LS ELE+L L+ ALP+SEQ QL+E+RARV+NFN+ Sbjct: 61 PTWILFGDEDKTPAPPVSLDSALDLSEDELEMLRLYRALPKSEQQAQLSELRARVENFNR 120 Query: 121 LFEELLKARQRTNKR 135 LF ELL+AR+R + Sbjct: 121 LFTELLEARKRNKHQ 135 >UniRef50_D2U099 Phage transcriptional regulator n=1 Tax=Arsenophonus nasoniae RepID=D2U099_9ENTR Length = 137 Score = 120 bits (302), Expect = 1e-26, Method: Composition-based stats. Identities = 57/135 (42%), Positives = 87/135 (64%), Gaps = 2/135 (1%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 T+GERI+ RR+ LK +QR+LA L I+HVS+SQWER +S P G+NL AL+K L C Sbjct: 1 MNMKTLGERIKARRQELKLSQRALASILGIAHVSISQWERNESTPKGENLMALAKTLHCE 60 Query: 63 PTWILFGDEDKQPTPPV--EKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNK 120 P+W+ + + E P+ LS + LL+LF+ LP+SEQ+ + +R + + +++ Sbjct: 61 PSWLFEEQGNLPISASELPEAPIKLSDLQKTLLDLFDELPDSEQEELVESLREKKQYYDQ 120 Query: 121 LFEELLKARQRTNKR 135 LFE+L K R R N++ Sbjct: 121 LFEQLAKKRIRINRQ 135 >UniRef50_C7BH54 Similar to dica, regulator of dicb encoded by prophage cp-933 (Putative regulatory protein) n=1 Tax=Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 RepID=C7BH54_PHOAA Length = 135 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 45/130 (34%), Positives = 66/130 (50%), Gaps = 2/130 (1%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKI-SHVSVSQWERGDSEPTGKNLFALSKVLQCSP 63 N +IG RI+ R K +Q +LA+ S + +E G + + LSK L SP Sbjct: 4 NESIGARIKRLRNQQKMSQAALAELCGWASQSRIGNYESGIRNVSTDDAVILSKALGVSP 63 Query: 64 TWILFGD-EDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLF 122 ++FGD E Q E LS +E LLELFN LP+SE D L + + + +N+L Sbjct: 64 AELMFGDAESSQENETSETCQELSNREKILLELFNELPDSEADELLKTLEEKKRYYNQLL 123 Query: 123 EELLKARQRT 132 EEL + + + Sbjct: 124 EELSQKKSKK 133 >UniRef50_D2U4L3 Phage transcriptional regulator n=1 Tax=Arsenophonus nasoniae RepID=D2U4L3_9ENTR Length = 137 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 52/125 (41%), Positives = 75/125 (60%), Gaps = 5/125 (4%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 ME K +IGERIR RRK L+ TQ+ L K + +SHV++SQWE+ ++EP G NL +L+ L Sbjct: 1 MEMK--SIGERIRLRRKELELTQKQLGKRVGVSHVAISQWEKEETEPKGDNLLSLADALM 58 Query: 61 CSPTWILFGDEDKQPT---PPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKN 117 C+ +IL G ++P K L+ +E LLE+FNAL E EQ L E+ N Sbjct: 59 CTAEYILRGTTSEKPIRCDNDTYKYSRLTKREENLLEMFNALTEDEQKNYLKEITETRAN 118 Query: 118 FNKLF 122 +++ Sbjct: 119 LERIY 123 >UniRef50_D2TVN8 Phage transcriptional regulator n=1 Tax=Arsenophonus nasoniae RepID=D2TVN8_9ENTR Length = 130 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 4/127 (3%) Query: 2 ETKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQC 61 E IG RI RR L LA + +S V+VSQWERG S G L +S+ L+C Sbjct: 3 EYDREAIGRRIYERRTELGLRAIDLADLIGVSRVAVSQWERGVSVLGGDKLMNISEALKC 62 Query: 62 SPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKL 121 SP WI+ G + + + + + ++++L L LP++E+D + + +V+ + KL Sbjct: 63 SPEWIIAGIDRLEKI----QDLNIEASDIKILRLAQQLPDTEKDNLIKMLEDKVEYYRKL 118 Query: 122 FEELLKA 128 + EL + Sbjct: 119 YTELTQK 125 >UniRef50_B5EK35 Transcriptional regulator, XRE family n=2 Tax=Acidithiobacillus ferrooxidans ATCC 53993 RepID=B5EK35_ACIF5 Length = 152 Score = 101 bits (253), Expect = 5e-21, Method: Composition-based stats. Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 18/142 (12%) Query: 8 IGERIRYRRKNLKHTQRSLAKALK-ISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 IG+R++ RK L TQ L K +S +V QWE G ++P L AL K L +P W+ Sbjct: 8 IGDRVKKIRKRLGLTQAELGKHAGGLSKSAVHQWENGGTKPAWDALTALRKNLGINPDWV 67 Query: 67 LFGDE---DKQPTPPVEKPVA------------LSPKELELLELFNALPESEQDTQLAEM 111 + G+ + TP + L+P++ +L +F+ L S+QD + E+ Sbjct: 68 MQGEGAMLQELGTPNAATSIESGADALPFDGRGLTPRQRAMLGIFDRLTSSQQDEAMREL 127 Query: 112 RARVKNFNKLFEELLKARQRTN 133 + ++ EEL R++TN Sbjct: 128 EETKRKNEEIIEEL--TRRKTN 147 >UniRef50_B5R8N7 Predicted phage regulatory protein n=9 Tax=Enterobacteriaceae RepID=B5R8N7_SALG2 Length = 132 Score = 101 bits (251), Expect = 8e-21, Method: Composition-based stats. Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 8/133 (6%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVS-VSQWERGDSEPTGKNLFALSKVL 59 M+T IGER++ R+N + LAK S S ++ +E G ++ L +VL Sbjct: 1 MKTIAEQIGERLKTIRQNRGLSMGRLAKLCGWSGSSRIANYEAGTRSIGAEDAITLGQVL 60 Query: 60 QCSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFN 119 SP ++FG ++ + LS + +LLELFN LP SEQ L R+K + Sbjct: 61 GISPAELMFGKQENANS-------WLSDNQQKLLELFNQLPASEQTRMLDLFEIRLKEID 113 Query: 120 KLFEELLKARQRT 132 + E+ L++RQ Sbjct: 114 EYVEQYLRSRQHK 126 >UniRef50_Q5LR46 DNA-binding protein, putative n=1 Tax=Ruegeria pomeroyi RepID=Q5LR46_SILPO Length = 134 Score = 99 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 63/120 (52%), Gaps = 7/120 (5%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M+T + +G RIR RR L +Q L +A+ + V ++E G + + L+A+++VL Sbjct: 1 MDTVDTVVGRRIRARRSALGLSQAELGRAVGVRFQQVQKYESGANRVSASRLWAIAEVLD 60 Query: 61 CSPTWILFGDEDKQ------PTPPVEKPVALSPKE-LELLELFNALPESEQDTQLAEMRA 113 + G + PV++ + L ++ +E++E++++LP +++ LA +R Sbjct: 61 VHISHFFEGIQAPDSGVIDGSDAPVDRLMFLQDRDSVEMVEIYSSLPPAQKRAVLAFVRT 120 >UniRef50_A1JLW6 Putative DNA-binding protein n=1 Tax=Yersinia enterocolitica subsp. enterocolitica 8081 RepID=A1JLW6_YERE8 Length = 139 Score = 98.8 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 2/122 (1%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 I R+ + LA+ IS + +W + + LS+ S +W+L Sbjct: 12 IAARLYQIMNKTGVNKSGLARICGISPQAAGRWFT-KGSISKDSALKLSEAFGVSLSWLL 70 Query: 68 FGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEELLK 127 DE + +P+ LS ++ ELL LF LPES++D + +R +V+N+++LF ELL+ Sbjct: 71 -SDERDSDDCSIFQPLVLSERQRELLNLFERLPESDKDNHIETLRIKVENYDRLFNELLE 129 Query: 128 AR 129 +R Sbjct: 130 SR 131 >UniRef50_C5EI29 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EI29_9FIRM Length = 146 Score = 98.1 bits (243), Expect = 9e-20, Method: Composition-based stats. Identities = 43/125 (34%), Positives = 66/125 (52%), Gaps = 5/125 (4%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M+ + +G RI+ RRK L TQ+ + A IS+ ++S+ ERG+ P+ K L +LSK+LQ Sbjct: 1 MDNIDKMVGIRIKTRRKELNLTQKDVYAATGISNGNLSEIERGNVLPSSKALVSLSKLLQ 60 Query: 61 CSPTWILFG-----DEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARV 115 S WIL G D T +E + L+ E ++ + +LP EQ +RA+V Sbjct: 61 TSIDWILTGEASIIDNSSPKTSNIEYSLKLNESEELIIFMLRSLPLEEQLDVKNYLRAKV 120 Query: 116 KNFNK 120 K Sbjct: 121 AKCEK 125 >UniRef50_C6M778 HTH-type transcriptional regulator DicA n=1 Tax=Neisseria sicca ATCC 29256 RepID=C6M778_NEISI Length = 218 Score = 97.7 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 37/78 (47%), Positives = 50/78 (64%), Gaps = 1/78 (1%) Query: 4 KNLTIGERIRYRRKNLKHTQRSLAKAL-KISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 N TIG+RIR +RK K TQ+ LAK L ISHV++SQWE ++P +NL+ LS+VL C Sbjct: 1 MNKTIGQRIRQKRKEFKWTQQELAKKLKDISHVAISQWESNTTKPNAENLYELSQVLGCD 60 Query: 63 PTWILFGDEDKQPTPPVE 80 W+L G+ + T V Sbjct: 61 LGWLLKGEGEDTNTNVVF 78 >UniRef50_B9Z4Y0 Transcriptional regulator, XRE family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z4Y0_9NEIS Length = 119 Score = 97.3 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 38/114 (33%), Positives = 58/114 (50%), Gaps = 6/114 (5%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + IG RI+ RK + TQ+ LA + + SVSQWE G++EPT N ++++ L+ S W Sbjct: 1 MIIGFRIKEARKARRRTQKWLADEVGVKQSSVSQWEMGETEPTTANCSSVAQALRISFEW 60 Query: 66 ILFGDEDKQPTPP------VEKPVALSPKELELLELFNALPESEQDTQLAEMRA 113 + G + T E L + ELL LF+ LP+ ++ L MR Sbjct: 61 LTTGRGEMDVTYASAVVHVAEPGQDLDDDKKELLALFDQLPKKKRQILLQFMRD 114 >UniRef50_A8VQI9 Putative transcriptional regulator, XRE family n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VQI9_9BACI Length = 210 Score = 97.3 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 49/91 (53%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + +G I RRK L +Q +A+ + +S +VS+WE G S P+ +L L++VL C Sbjct: 1 MALGTTISQRRKELNLSQAFVAEEMGVSRQAVSKWETGQSVPSTAHLIRLAEVLGCDVQD 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELF 96 + D++ QP P E+ + ++L +F Sbjct: 61 LAEPDQEAQPAQPAEESGSKKDIRMQLAAVF 91 >UniRef50_D2U1N5 Phage transcriptional regulator n=1 Tax=Arsenophonus nasoniae RepID=D2U1N5_9ENTR Length = 131 Score = 96.5 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 2/126 (1%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + +G RIR RK T LA A+ ++S+ ER + L ++ L Sbjct: 1 MNVGTRIRELRKKKGMTILQLATAINSDVGNISRLERNKQGYSENTLLKIASALGVQVAD 60 Query: 66 IL--FGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFE 123 + + + +K L ++ELLEL+++LPE E + EMR R ++ +F Sbjct: 61 LFLDSSETNNASRNNKQKYSNLKSDQIELLELYDSLPEEEAKRFIKEMRDRKTHYELIFN 120 Query: 124 ELLKAR 129 E+LK R Sbjct: 121 EMLKKR 126 >UniRef50_C2HKP6 XRE family transcriptional regulator n=2 Tax=Lactobacillus acidophilus RepID=C2HKP6_LACAC Length = 174 Score = 96.1 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 43/81 (53%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 +E +++ ++I R + +Q LA+ L +S SVS+WE G ++P + ALS + Sbjct: 37 IEVIRMSLNQKIAQLRNDNNWSQEELAEKLNVSRQSVSKWESGQAKPDLDKIIALSDIFD 96 Query: 61 CSPTWILFGDEDKQPTPPVEK 81 S ++L D +++ P K Sbjct: 97 VSTDYLLKDDNEEKSNPSTNK 117 >UniRef50_P69202 Repressor protein C2 n=23 Tax=root RepID=RPC2_BPP22 Length = 216 Score = 96.1 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 39/70 (55%), Positives = 52/70 (74%), Gaps = 2/70 (2%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M T+ + GERIR RRK LK Q +L K + +S+V++SQWER ++EP G+NL ALSK LQ Sbjct: 1 MNTQLM--GERIRARRKKLKIRQAALGKMVGVSNVAISQWERSETEPNGENLLALSKALQ 58 Query: 61 CSPTWILFGD 70 CSP ++L GD Sbjct: 59 CSPDYLLKGD 68 >UniRef50_C4X6V4 Putative repressor protein of prophage n=2 Tax=Enterobacteriaceae RepID=C4X6V4_KLEPN Length = 241 Score = 95.0 bits (235), Expect = 6e-19, Method: Composition-based stats. Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 1/94 (1%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + +RIR RRK LK TQ L K + ++ V+V+ WE GD P G NL ALS L+CSP W Sbjct: 24 MKMNDRIRARRKELKLTQAVLGKLVGVNRVTVTGWESGDYAPGGSNLQALSAALKCSPKW 83 Query: 66 ILFGDEDKQPTPPVEKPVA-LSPKELELLELFNA 98 ++ G + P +P KE+ +L A Sbjct: 84 LIDGIGEPDNEEPSFRPTEKFGVKEIPVLSWVQA 117 >UniRef50_D2TX49 Phage transcriptional regulator n=1 Tax=Arsenophonus nasoniae RepID=D2TX49_9ENTR Length = 237 Score = 95.0 bits (235), Expect = 7e-19, Method: Composition-based stats. Identities = 40/94 (42%), Positives = 60/94 (63%), Gaps = 2/94 (2%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M+T +I RIR RRK L+ TQ +AKAL +S VSV++WE GD++P G+NL L+KVL Sbjct: 15 MKTST-SISNRIRDRRKELRLTQNEIAKALGVSRVSVTKWENGDTKPDGENLHILTKVLA 73 Query: 61 CSPTWILFG-DEDKQPTPPVEKPVALSPKELELL 93 C+ W+L+G D + + + + + K + LL Sbjct: 74 CNIEWLLYGKDSRSEDDTKLYRLSSATFKRIPLL 107 >UniRef50_A4SLB7 Phage repressor n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SLB7_AERS4 Length = 227 Score = 95.0 bits (235), Expect = 8e-19, Method: Composition-based stats. Identities = 28/72 (38%), Positives = 42/72 (58%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +TI +RI RR L ++ +LAKA+ +S VSV +WE G ++P G+ L L+ L + W Sbjct: 1 MTISDRIFSRRTALNLSKTALAKAIGVSDVSVGKWESGLNQPKGRYLNDLAAALGVTVDW 60 Query: 66 ILFGDEDKQPTP 77 +L G D P Sbjct: 61 LLAGSGDGPEQP 72 >UniRef50_D2U0V0 Phage transcriptional regulator n=1 Tax=Arsenophonus nasoniae RepID=D2U0V0_9ENTR Length = 232 Score = 94.2 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 36/96 (37%), Positives = 48/96 (50%), Gaps = 13/96 (13%) Query: 10 ERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFG 69 ERIR R + K TQ SL K + +S ++SQWE G +EP GKNL +L+K L + W+L G Sbjct: 4 ERIRQARNHNKMTQESLGKRIGVSKATISQWESGTTEPNGKNLVSLAKALGVTIEWLLDG 63 Query: 70 DEDKQPTP-------------PVEKPVALSPKELEL 92 DE P + L E+EL Sbjct: 64 DEKNAEVNAQLANAKIIGNFAPWDSNTPLGEDEIEL 99 >UniRef50_Q12J32 Transciptional regulator n=10 Tax=Shewanella RepID=Q12J32_SHEDO Length = 229 Score = 93.8 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 32/73 (43%), Positives = 50/73 (68%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 + ERI+ RRK L TQ S+AK + ++ ++S WE G + P G+NL AL+K L+C+P ++L Sbjct: 2 MNERIKQRRKELGLTQPSIAKTIGLTKATISLWESGSTSPKGENLHALAKALRCAPEFLL 61 Query: 68 FGDEDKQPTPPVE 80 FG++ +P P E Sbjct: 62 FGNDSIKPEPNAE 74 >UniRef50_C8WL34 Transcriptional regulator, XRE family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WL34_EGGLE Length = 380 Score = 93.4 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 28/88 (31%), Positives = 47/88 (53%) Query: 4 KNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSP 63 N+ I +R+ RRK +Q +LA L +S +VS+WER +S P NL AL+++ S Sbjct: 1 MNVEIAQRLAERRKQAGLSQEALAARLGVSRQAVSKWERSESSPDTDNLIALAQLYGLSL 60 Query: 64 TWILFGDEDKQPTPPVEKPVALSPKELE 91 +L+ DE+ + E + ++ E Sbjct: 61 DDLLYVDEEIRDDVTFEAADRAAKRQAE 88 >UniRef50_C7IG82 Transcriptional regulator, XRE family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IG82_9CLOT Length = 213 Score = 93.0 bits (230), Expect = 2e-18, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 41/80 (51%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + I +RI+ RK +Q LA L +S +VS+WE G S P + + +S+ + + + Sbjct: 1 MNISDRIQSLRKTKGISQEQLADELGVSRQAVSKWESGQSMPDIEKIILMSEYFKITTDY 60 Query: 66 ILFGDEDKQPTPPVEKPVAL 85 +L G + + T + A+ Sbjct: 61 LLKGIDLPKDTTEKKPSAAI 80 >UniRef50_D0C932 Cro/CI family transcriptional regulator n=8 Tax=Acinetobacter baumannii RepID=D0C932_ACIBA Length = 250 Score = 93.0 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 2/109 (1%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +++ RIR + + K LA+A K S V+ +W G S PT +NL ++K L S W Sbjct: 1 MSLHTRIRQKLEEKKLRAADLARATKKSPVAAKKWLDGTSVPTAENLKVIAKFLGVSDDW 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRAR 114 +L+G D+Q + L+ ++E + +P+SE + + A+ Sbjct: 61 LLYGGSDEQESSN--NLAQLNVIDIEAFKQKYNIPDSEDAVKFVQAPAK 107 >UniRef50_C2HM44 Helix-turn-helix motif protein n=2 Tax=Lactobacillus acidophilus RepID=C2HM44_LACAC Length = 321 Score = 91.9 bits (227), Expect = 6e-18, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 48/112 (42%), Gaps = 10/112 (8%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + +G++I RK +Q +LA+ + +S +VS+WE S P + + LS++ + + Sbjct: 1 MKLGQKITQLRKKSHLSQEALAEKMNVSRQAVSKWESNQSIPDIEKIVDLSELFGVTTDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKN 117 +L K TP E P + ++ LP + + K Sbjct: 61 LL-----KNGTPSFELPGKTTEEKQ-----IKKLPSIDDQQITQYLEVAKKT 102 >UniRef50_B6AW67 Transcriptional regulator, XRE family n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6AW67_9RHOB Length = 133 Score = 91.9 bits (227), Expect = 6e-18, Method: Composition-based stats. Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 10/129 (7%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M ++ IG RI+ RR LK +Q LA+A+ + V ++E G + + L +++ L Sbjct: 1 MTNIDVLIGARIKGRRIALKISQTKLAEAVGVRFQQVQKYESGANRVSASRLLMVAETLG 60 Query: 61 CSPTWILFG--------DEDKQPTPPVEKPVALSPKEL--ELLELFNALPESEQDTQLAE 110 ++ G D QP+ P+ E+L L LP+ +Q LA Sbjct: 61 VPISYFFQGLDNAGSADSTDVQPSARATAPMNALSDARVSEILALVETLPKEQQMAVLAF 120 Query: 111 MRARVKNFN 119 +R K Sbjct: 121 LRTLAKTTE 129 >UniRef50_Q5E364 Transcriptional repressor, Cro/CI family n=1 Tax=Vibrio fischeri ES114 RepID=Q5E364_VIBF1 Length = 215 Score = 91.9 bits (227), Expect = 6e-18, Method: Composition-based stats. Identities = 29/80 (36%), Positives = 46/80 (57%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 T G R+ + RK K TQ S+AKA +S SV+ WE+ ++P G++L AL+ L+C W+ Sbjct: 3 TFGSRLFHLRKARKLTQSSIAKASGVSRSSVTLWEQDTNKPKGESLMALASFLKCDVNWL 62 Query: 67 LFGDEDKQPTPPVEKPVALS 86 L G +P ++ +S Sbjct: 63 LTGQGSPEPAKQEQETTVVS 82 >UniRef50_B4ETH6 Putative phage repressor n=1 Tax=Proteus mirabilis HI4320 RepID=B4ETH6_PROMH Length = 215 Score = 91.5 bits (226), Expect = 7e-18, Method: Composition-based stats. Identities = 34/90 (37%), Positives = 55/90 (61%), Gaps = 2/90 (2%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + I RI+ RR L TQ +LAK L +S VS+++WE +EP G+NL AL+KVL+ SP W Sbjct: 1 MHI--RIKERRLQLSLTQEALAKMLSVSRVSITKWETRVTEPDGENLQALAKVLEVSPEW 58 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLEL 95 +L+G + + ++ K++ ++ L Sbjct: 59 LLYGGNSSEADALIITRKTVNIKKIPIITL 88 >UniRef50_A6P0Y3 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P0Y3_9BACE Length = 259 Score = 91.5 bits (226), Expect = 8e-18, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 34/62 (54%) Query: 10 ERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFG 69 ER+ R+ +Q LA + +S +V +WE G S+P NL A+S+ + ++L G Sbjct: 4 ERLYQLRRERGISQEELANIIGVSRQAVQKWESGASQPNIDNLVAISEYFGVTLDYLLKG 63 Query: 70 DE 71 DE Sbjct: 64 DE 65 >UniRef50_B0P2E7 Putative uncharacterized protein n=4 Tax=Firmicutes RepID=B0P2E7_9CLOT Length = 204 Score = 91.1 bits (225), Expect = 8e-18, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + +RI+Y RK+ +Q LA + +S +VS+WE S P + + +S + + Sbjct: 1 MNMADRIQYLRKSKGISQEELADKVGVSRQAVSKWESEQSTPDLEKIIIMSDFFGVTTDY 60 Query: 66 ILFGDEDKQPTPPVEKPV 83 IL G E K + Sbjct: 61 ILKGIEPVADKEQKNKEL 78 >UniRef50_C8TM97 Predicted phage repressor protein n=15 Tax=Escherichia coli RepID=C8TM97_ECO26 Length = 133 Score = 91.1 bits (225), Expect = 9e-18, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 58/120 (48%), Gaps = 1/120 (0%) Query: 11 RIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFGD 70 RI + +Q LA+ + ++ +V QW G + P +L L +V W L Sbjct: 11 RISKLLQETGWSQAELARRIGVTQQTVQQWVSGKATPKASSLDKLVEVSGHPLHWFLLPP 70 Query: 71 EDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEELLKARQ 130 E+ + + + + P++ ELL+ F+A PE +Q+ L E++ + K+ + L A++ Sbjct: 71 EECEQIFTPDT-MKIGPRQRELLQAFSAFPEEDQEKMLQEIKDKKKSMEETIARWLAAQK 129 >UniRef50_C0EID5 Putative uncharacterized protein n=2 Tax=Clostridium RepID=C0EID5_9CLOT Length = 261 Score = 91.1 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 41/86 (47%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + E+++ RK +Q LA+ L +S +VS+WE G S P +NL ALS + + Sbjct: 1 MQLNEKLQILRKEAGLSQERLAEKLGVSRQAVSKWESGQSTPDIENLSALSDLFGVTLDE 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELE 91 ++ + QP V + + Sbjct: 61 LIKKESAPQPAQAVRPAYGGTARSYR 86 >UniRef50_A7JPM0 Possible LexA family repressor/S24 family protease n=4 Tax=Proteobacteria RepID=A7JPM0_PASHA Length = 218 Score = 90.7 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 1/77 (1%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKAL-KISHVSVSQWERGDSEPTGKNLFALSKVLQC 61 T+G+RI+ RRK LK TQ+ LA AL +SHV+VSQWE ++P +N+ LS VLQC Sbjct: 1 MNTQTLGDRIKSRRKELKLTQKDLATALKGVSHVAVSQWESSTTKPNSENILDLSTVLQC 60 Query: 62 SPTWILFGDEDKQPTPP 78 +W+L G+ + P Sbjct: 61 DISWLLRGNGESNVLPA 77 >UniRef50_A9NHP5 Membrane-anchored DNA-binding protein, putative n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NHP5_ACHLI Length = 231 Score = 90.7 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 5/93 (5%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +T G+R+ RK+ +TQ L + L +S S+S+WE + P + L LSK+ Q S + Sbjct: 1 MTTGQRLAKLRKDHNYTQEELGELLDVSRQSISKWESDQAFPETQKLIELSKLYQTSVDY 60 Query: 66 ILFGDEDKQPTP-----PVEKPVALSPKELELL 93 +L + + + +P ++PK ++ Sbjct: 61 LLGNENEHTQSNIGDSTHTNEPFKMTPKLFTMI 93 >UniRef50_D2TX37 Phage transcriptional regulator n=1 Tax=Arsenophonus nasoniae RepID=D2TX37_9ENTR Length = 220 Score = 90.7 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 49/87 (56%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 ME+ T+G+R++Y RK K+TQ +L KA+ ++ V+V WE+ +EP GK L L++ L Sbjct: 1 MESIVKTLGQRLKYLRKLKKYTQVTLGKAIGVTGVTVGYWEKDLNEPGGKALSKLARALN 60 Query: 61 CSPTWILFGDEDKQPTPPVEKPVALSP 87 + ++L+G P + P Sbjct: 61 TTENYLLYGKNPGSVIPINNSNIRFIP 87 >UniRef50_Q6J1N3 Putative prophage repressor protein n=1 Tax=Burkholderia phage BcepC6B RepID=Q6J1N3_9CAUD Length = 244 Score = 90.0 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 28/71 (39%), Positives = 37/71 (52%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 T+ IG RIR RK T + LA IS SVS+WE G S+P L L+K L + Sbjct: 2 TEAQHIGTRIRELRKAKGLTLQQLADVFGISRASVSEWESGRSKPDANKLVLLAKELHTA 61 Query: 63 PTWILFGDEDK 73 ++L GD + Sbjct: 62 VEYLLNGDTND 72 >UniRef50_UPI0001C3512F putative transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C3512F Length = 365 Score = 90.0 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 29/61 (47%), Positives = 35/61 (57%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 +GERI Y RK K TQ LA+ L IS +VS+WE G S P L LS+VL S + Sbjct: 31 AMGERITYLRKRKKMTQAQLAEQLGISAQAVSKWESGLSCPDIMTLVPLSQVLGVSTDEL 90 Query: 67 L 67 L Sbjct: 91 L 91 >UniRef50_B0SWF3 Transcriptional regulator, XRE family n=2 Tax=Caulobacter sp. K31 RepID=B0SWF3_CAUSK Length = 149 Score = 89.2 bits (220), Expect = 3e-17, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 60/129 (46%), Gaps = 12/129 (9%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 ++ +G R+R RRK L +Q LA ++ I+ + ++ERG + + L+ ++ LQ S + Sbjct: 11 DIHVGARVRMRRKALGLSQTQLADSVGITFQQLQKYERGANRVSASKLYGMAVTLQTSVS 70 Query: 65 WILFGDEDKQPTPPVEKPV------------ALSPKELELLELFNALPESEQDTQLAEMR 112 W G E+ + LS + LEL LF +P +++ LA + Sbjct: 71 WFFQGLSAVDVANATEEQMLEEHRLKGLQRFLLSSEGLELASLFPQIPPTQRQQLLALAK 130 Query: 113 ARVKNFNKL 121 + + ++ Sbjct: 131 SLIDRGEEV 139 >UniRef50_C6LAG2 DNA-binding protein n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LAG2_9FIRM Length = 421 Score = 89.2 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 5/97 (5%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 ME K T G + RRK L TQ+ A L ++ +VS+WERG S P + ++ VL+ Sbjct: 8 MENKK-TFGAFVLRRRKELGMTQKEFAARLYVTESAVSKWERGMSYPDITLIRSICSVLE 66 Query: 61 CSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFN 97 S +L G ED + L+ K L L + Sbjct: 67 VSEHELLTGSEDTEKRTSE----KLAEKYLRLTRNYR 99 >UniRef50_A0YEC5 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YEC5_9GAMM Length = 107 Score = 88.8 bits (219), Expect = 4e-17, Method: Composition-based stats. Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 5/96 (5%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +TI R++ R T + AK +S V W + P+ + +S+ L SP W Sbjct: 1 MTIDHRVKEIRNKHGLTHTAFAKIAGVSRQLVYNWYNQGTSPSADAVLRISRTLDISPYW 60 Query: 66 ILFGDED-----KQPTPPVEKPVALSPKELELLELF 96 L+G D Q E V LS + ELLE+F Sbjct: 61 FLYGKGDMYVVKGQQEKIAELLVDLSDADKELLEIF 96 >UniRef50_A6NYY1 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A6NYY1_9BACE Length = 267 Score = 88.8 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 47/92 (51%), Gaps = 1/92 (1%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +T+GE+I+ RK +Q +LA+ + ++ ++S+WE G S P + LS + S + Sbjct: 1 MTLGEKIQKLRKQRGLSQEALAEKVTVTRQTISKWELGQSLPDLDFIAQLSDIFNVSSDY 60 Query: 66 ILFGD-EDKQPTPPVEKPVALSPKELELLELF 96 ++ + + P ++ LS + ++ + Sbjct: 61 LIKDEMTEPDELPYKKRNYRLSERSKRIILVI 92 >UniRef50_C2L015 Transcriptional regulator n=10 Tax=Firmicutes RepID=C2L015_9FIRM Length = 213 Score = 88.8 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 35/65 (53%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 IG +I+ R K TQ +A+ L +S ++S WE G S P ++ +S+ S ++L Sbjct: 5 IGSKIKAARMEKKFTQEQVAEVLGVSRQTISNWENGKSYPDIISVIKMSECYGVSLDYLL 64 Query: 68 FGDED 72 G+E Sbjct: 65 KGEEK 69 >UniRef50_Q4L9W0 Similar to unknown protein n=4 Tax=Staphylococcus RepID=Q4L9W0_STAHJ Length = 134 Score = 88.4 bits (218), Expect = 6e-17, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 39/69 (56%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 K ++GERIR RK+ K +Q LA+ L +S S+S WER S P L ++++ S Sbjct: 1 MKTKSVGERIRNLRKSKKMSQEKLAEKLNVSRHSISNWERDVSSPDIHALLEMTELFGVS 60 Query: 63 PTWILFGDE 71 ++ GDE Sbjct: 61 LNHLVKGDE 69 >UniRef50_A3CL00 Transcriptional regulator, XRE family, putative n=2 Tax=Streptococcus RepID=A3CL00_STRSV Length = 205 Score = 88.4 bits (218), Expect = 6e-17, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 5/91 (5%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + +RI+Y RK +Q LA L +S +VS+WE S P + ++S + + + Sbjct: 1 MNLSDRIQYLRKARGISQEGLADQLGVSRQAVSKWESEQSMPDLDKIISMSDYFEVTTDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELF 96 +L G E P V+K S K + Sbjct: 61 LLKGME-----PVVQKEEEQSIKHRRIASNI 86 >UniRef50_Q1YI68 Putative transcriptional regulator n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YI68_MOBAS Length = 167 Score = 88.0 bits (217), Expect = 7e-17, Method: Composition-based stats. Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 10/117 (8%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M+ T+G RI+ R++L T LA L + ++ WER SEP L LS +L Sbjct: 54 MQMDGDTMGGRIQRGRESLGITTAELAARLGVKPETMRGWERDRSEPRANRLITLSGILG 113 Query: 61 CSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQ--DTQLAEMRARV 115 SP W+L G + T ++ E + + L D ++A + A + Sbjct: 114 VSPAWLLGGYGEVPDTVDLD--------ENGMAARLDNLRARRDVLDREIARLEAAM 162 >UniRef50_A6NZ66 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NZ66_9BACE Length = 409 Score = 88.0 bits (217), Expect = 8e-17, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 43/90 (47%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +T+G+RI RK +Q L + + +S +VS+WE + P N A+S+V S Sbjct: 1 MTLGQRIAALRKEKGLSQEGLGELVGVSRQAVSKWEADKTVPDVNNCIAMSRVFGISLAG 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLEL 95 +L +E LS ++L ++E Sbjct: 61 LLEVEESLGDGAERTGGEQLSEEQLAMVEA 90 >UniRef50_Q5ZTV2 Hypothetical phage repressor n=1 Tax=Legionella pneumophila subsp. pneumophila str. Philadelphia 1 RepID=Q5ZTV2_LEGPH Length = 207 Score = 88.0 bits (217), Expect = 8e-17, Method: Composition-based stats. Identities = 38/108 (35%), Positives = 52/108 (48%), Gaps = 3/108 (2%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M+ K L IG RI+ RKN K T LA+ S +S WERG P K+ L L Sbjct: 9 MDIK-LKIGLRIKESRKNKKFTAVQLAEVTGFSAQRISNWERGTRTPRFKDAEILGSALG 67 Query: 61 CSPTWILFGDEDKQPTPPV-EKPVALSPKELELLELFNALPESEQDTQ 107 SPTW+LF D D +P + + + + +E + +P S QD Sbjct: 68 VSPTWLLFLDIDHKPMKDHPFQTIPIINASSK-IEGYLPIPSSIQDNI 114 >UniRef50_B1KN13 Transcriptional regulator, XRE family n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KN13_SHEWM Length = 327 Score = 88.0 bits (217), Expect = 8e-17, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 43/91 (47%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + E+I RK L +Q LA+ + IS SVS+WE +S P + L+ + + S + Sbjct: 1 MILAEKIIRLRKQLGWSQEELAEKMAISRQSVSKWESANSIPDLNKIIKLADIFEVSTDF 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELF 96 +L + + KP L+ LE + Sbjct: 61 LLKDEYEANSYNDEPKPSNLNQVSLEQATQY 91 >UniRef50_Q5L2Q2 Transcriptional regulator n=3 Tax=Geobacillus kaustophilus RepID=Q5L2Q2_GEOKA Length = 125 Score = 88.0 bits (217), Expect = 9e-17, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 1/114 (0%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 +G+R+R R+ K TQ L K + ++ VS+S +E G+ P + L L+ + ++L Sbjct: 7 LGDRLRKLRQEKKLTQEELGKKINVTKVSISGYENGNRTPDTETLQKLADFFNVTTDYLL 66 Query: 68 FGDEDKQPTPPVEKPVALSPKELEL-LELFNALPESEQDTQLAEMRARVKNFNK 120 + P + P L EL L + PE ++ L ++ Sbjct: 67 GRTDHPNPPDQDDIPEELKDPELGLFFKELAEAPEERREQLLKIWEILKSEGDR 120 >UniRef50_B6G1K3 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G1K3_9CLOT Length = 359 Score = 88.0 bits (217), Expect = 9e-17, Method: Composition-based stats. Identities = 32/141 (22%), Positives = 66/141 (46%), Gaps = 12/141 (8%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +T+ E+I RK +Q LA+ L IS SVS+WE G+S PT + L +S++ + S + Sbjct: 1 MTLSEKIMNLRKKNGWSQEELAERLDISRQSVSKWESGESVPTLEKLIRISEIFEVSTDY 60 Query: 66 ILFGDEDKQP---------TPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVK 116 +L D ++ +E+ ++ + + + + E+ + ++ R Sbjct: 61 LLKDDFKEEKFDRNKSSIYMNKIEESSYINNRNISSDIAIDRIIGEEKANE-NVIKRRKT 119 Query: 117 NFNKL--FEELLKARQRTNKR 135 +F ++ + EL + + R Sbjct: 120 SFEEVSNYIELAEITAKKFAR 140 >UniRef50_A0RLU0 Transcriptional regulator n=7 Tax=Bacillus RepID=A0RLU0_BACAH Length = 116 Score = 87.7 bits (216), Expect = 9e-17, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 2/111 (1%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 IGE+I+ RKN K TQ L A+ +S +++S +E+G P ++L ++ + ++L Sbjct: 2 IGEKIKELRKNSKMTQEQLGDAIGVSKMAISYFEKGKKSPGRESLEKIADYFGVTTDYLL 61 Query: 68 FGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNF 118 ED + +K V S + +L + +LPE E+ ++ V Sbjct: 62 GRSEDPELNEEEDKTV--SEEGKNILAIIESLPEDERKKAWEQLEMYVNYM 110 >UniRef50_C6J5N1 Predicted protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J5N1_9BACL Length = 115 Score = 87.3 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 6/118 (5%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + +GE++R RK+ + Q+ A + +S ++S ERG P+ + + AL QC W Sbjct: 1 MNLGEKVRTIRKSHELNQKEFALKIGVSQGTLSDIERGVCLPSCETIIALKNTFQCDLNW 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQ--LAEMRARVKNFNKL 121 +L + P +S +EL+LL ALP E++ + E++ R + K Sbjct: 61 LL----SDYDESFSQTPTYISSEELKLLTSIRALPAQEKNELYEIIEIKMRKNKYPKT 114 >UniRef50_B8EFW1 Putative phage repressor n=1 Tax=Shewanella baltica OS223 RepID=B8EFW1_SHEB2 Length = 209 Score = 86.9 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 43/68 (63%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + +G+R++ RK TQ +A+ + +S V+VS+WE G S+P G+ L AL +L+ W Sbjct: 1 MKLGDRLKNTRKIKGLTQLQIAEGVGVSKVAVSRWELGYSQPKGEKLNALCNLLEIDSNW 60 Query: 66 ILFGDEDK 73 +L G +D+ Sbjct: 61 LLTGLKDE 68 >UniRef50_B0UWI4 Putative phage repressor n=1 Tax=Haemophilus somnus 2336 RepID=B0UWI4_HAES2 Length = 235 Score = 86.9 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 3/102 (2%) Query: 4 KNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSP 63 N IG RIR +R+ L T+ LAKA+ +S ++ WE + EP + ++ L +P Sbjct: 7 NNSLIGNRIREQRERLNLTRPELAKAVDVSLSALQGWEMNEREPQASMIITIANELGVTP 66 Query: 64 TWILFGDEDKQPTP---PVEKPVALSPKELELLELFNALPES 102 ++L G+ D+ VEK L+ + ++ ++++ S Sbjct: 67 NYLLTGENDQPKKTIERAVEKVKDLTENVVIMIASYSSINVS 108 >UniRef50_C2HK27 Helix-turn-helix motif protein n=1 Tax=Finegoldia magna ATCC 53516 RepID=C2HK27_PEPMA Length = 327 Score = 86.9 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 51/123 (41%), Gaps = 16/123 (13%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + ++I RK TQ LA+ L +S SVS+WE G+S P + LS V + Sbjct: 1 MILSDKIILLRKKNNLTQEELAEKLGVSRQSVSKWEMGNSIPDINKIIQLSDVFGVKTDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEEL 125 +L + D + S +E L E+++ + + + + + ++ Sbjct: 61 LLKDEIDD---------IEYSDDTVEEL-------ETKKTISVEDANDFMSAYEEYSNDV 104 Query: 126 LKA 128 + Sbjct: 105 ADS 107 >UniRef50_Q046H9 Transcriptional regulator, xre family n=7 Tax=Lactobacillus RepID=Q046H9_LACGA Length = 334 Score = 86.5 bits (213), Expect = 2e-16, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 43/91 (47%), Gaps = 5/91 (5%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + +G++I RK +Q LA+ + +S +VS+WE S P + + LS++ + + Sbjct: 1 MRLGQKIADLRKKNNLSQEGLAEKMNVSRQAVSKWESEQSIPDIEKIVNLSELFGVTTDY 60 Query: 66 ILFGDE-----DKQPTPPVEKPVALSPKELE 91 +L E + +K LS + ++ Sbjct: 61 LLKSGEPSFELKNEDINDKDKLPVLSDELVK 91 >UniRef50_B7DU45 Transcriptional regulator, XRE family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DU45_9BACL Length = 161 Score = 86.5 bits (213), Expect = 2e-16, Method: Composition-based stats. Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 3/129 (2%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 + R+R R+ TQ + L +S V+VS +E G P K L ++ + S ++ Sbjct: 6 ALTSRLRLLRQMKNWTQEEFGRKLNVSKVTVSSYESGVRTPDAKTLIKIADLFDVSVDYL 65 Query: 67 LFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEELL 126 L + K E V +S E ELLE F L E++ L R ++ ++ +EL Sbjct: 66 LGRTDGKNEGYTSE--VLVSEDEKELLERFRNLSENDAKVLLQLARV-LERRGQISDELS 122 Query: 127 KARQRTNKR 135 Q ++ Sbjct: 123 PVTQIITEQ 131 >UniRef50_B0NKE5 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=B0NKE5_EUBSP Length = 476 Score = 86.5 bits (213), Expect = 2e-16, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 44/83 (53%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 ME +++G+ I RRK+ +Q +A + +S +VS+WE+ S P+ +N+ L+++L+ Sbjct: 1 MEVSRMSLGKNIASRRKSQNFSQEDIATLVGVSRQAVSKWEKDLSSPSTENIIRLAEILR 60 Query: 61 CSPTWILFGDEDKQPTPPVEKPV 83 S + G ++ V Sbjct: 61 VSVEELTGGRPAAAGRDREDRSV 83 >UniRef50_B8CKR7 Helix-turn-helix motif protein n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CKR7_SHEPW Length = 328 Score = 86.5 bits (213), Expect = 2e-16, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 40/88 (45%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + ++I RK +Q LA+ + +S SVS+WE +S P + L+++ + S + Sbjct: 1 MILADKIIRLRKQCGWSQEDLAEKMNVSRQSVSKWESANSIPDLNRIITLAEIFEVSTDF 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELL 93 +L + + T L E L Sbjct: 61 LLKDETEVSETLESVSQTNLISLEQALA 88 >UniRef50_Q5FQ46 Putative uncharacterized protein n=1 Tax=Gluconobacter oxydans RepID=Q5FQ46_GLUOX Length = 203 Score = 86.5 bits (213), Expect = 2e-16, Method: Composition-based stats. Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 6/113 (5%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 L +G RIR R+ +Q+ LA + IS +V+ WE G S GK+L +L++VL P Sbjct: 80 GLELGRRIRLLREMAGLSQQQLADKVGISRSAVAFWETGRSGHVGKHLGSLAQVLGVEPE 139 Query: 65 WILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKN 117 +L G K L+P E +L L+ L + + RV+N Sbjct: 140 VLLTGMAYKA------IQATLTPDENTMLTLYRQLDPLIKLQAQKWIERRVRN 186 >UniRef50_B5UTN8 Transcriptional regulator Xre n=10 Tax=Bacillus cereus group RepID=B5UTN8_BACCE Length = 117 Score = 86.5 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 52/109 (47%), Gaps = 2/109 (1%) Query: 9 GERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILF 68 +R++ + TQ+ LA A+ +SHVSV + G P + L ++ L + ++L Sbjct: 4 HQRLKLLIEKRGITQQQLADAIGVSHVSVYNYVEGKKSPGTRTLQKIANHLNVTTDYLLG 63 Query: 69 GDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKN 117 P ++ + L+ + E+L++ N LPE ++ L ++ V Sbjct: 64 --LSDSPDLTADQDLQLTKEAQEILQIINDLPEEQRKKALEQLEMFVSY 110 >UniRef50_A7B4H5 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B4H5_RUMGN Length = 248 Score = 86.1 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 6/95 (6%) Query: 2 ETKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQC 61 E N G + RK +TQ+ LA+ L +S+ ++S+WERG S P L L+ +L Sbjct: 6 EIDNQKFGGFVAALRKEKGYTQKELAEKLFLSNKAISKWERGLSLPDIALLEPLADILGV 65 Query: 62 SPTWILFGDEDKQPTPPVE------KPVALSPKEL 90 + +L G+ P E K + LS + Sbjct: 66 TVAELLKGERIHAALEPQEMDELLGKTIHLSDNQK 100 >UniRef50_C9XPP6 Putative phage regulatory protein n=5 Tax=Clostridium difficile RepID=C9XPP6_CLODC Length = 135 Score = 86.1 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 6/121 (4%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 T+G+RI Y R + K TQR L LK ++ ++E GD +P L +++ + W+ Sbjct: 6 TLGKRIAYLRNSKKLTQRKLMDILKF--ENLGKYETGDRKPNCDILMSIADYFNVTTDWL 63 Query: 67 LFGDEDKQPTPPV----EKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLF 122 L+G E V E + ++ E+ +L L+ L E ++ + ++ + L Sbjct: 64 LYGKEKVNVNSSVKEDKEDYLHVTNDEMMILNLYRQLNERDKIKIEGILELKISEYKDLK 123 Query: 123 E 123 + Sbjct: 124 K 124 >UniRef50_C3RPR9 Predicted protein n=2 Tax=Bacteria RepID=C3RPR9_9MOLU Length = 297 Score = 86.1 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 38/69 (55%) Query: 2 ETKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQC 61 E +++ + +R RK ++Q LA+ L +S +VS+WE + P ++L LS + +C Sbjct: 3 EVIKMSLSDNLRALRKQKGYSQEQLAERLNVSRQAVSKWESDNGYPEMESLIILSDLFEC 62 Query: 62 SPTWILFGD 70 + +L D Sbjct: 63 TIDDLLKND 71 >UniRef50_A1ACF7 Putative transcriptional regulator n=9 Tax=Enterobacteriaceae RepID=A1ACF7_ECOK1 Length = 139 Score = 86.1 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 65/110 (59%), Gaps = 2/110 (1%) Query: 23 QRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFGDEDKQPTPPVEKP 82 Q +A+ +K++ +VS+W G++ P + L L+ ++ +PT++L ED + + V Sbjct: 30 QAEIARRMKLTPKAVSKWFNGETIPRREKLRELATLIGTTPTYLLG--EDTEESGQVRFY 87 Query: 83 VALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEELLKARQRT 132 L+P++ +++L + LP+SE D L + + + +N ++EEL + +++ Sbjct: 88 QELNPRQKIIIDLLDELPDSETDELLKTLEEKKQKYNAIYEELARKKKQK 137 >UniRef50_C7N0U4 Predicted transcriptional regulator n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N0U4_SLAHD Length = 459 Score = 85.7 bits (211), Expect = 4e-16, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 36/70 (51%) Query: 4 KNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSP 63 N + ER+ R+ +Q LA L +S +VS+WER +S P NL AL+K+ + Sbjct: 1 MNYEVAERLAELRRAKGLSQEELAHELGLSRQAVSKWERAESSPDTDNLIALAKLYGMTL 60 Query: 64 TWILFGDEDK 73 ++ G + Sbjct: 61 DELVHGPAEA 70 >UniRef50_C0CR55 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=C0CR55_9FIRM Length = 341 Score = 85.7 bits (211), Expect = 4e-16, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 43/113 (38%), Gaps = 5/113 (4%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + E+I RK +Q LA+ +S S+S+WE S P + LS++ Q S + Sbjct: 1 MLLSEKILTLRKKNGWSQEELAEKCGVSRQSISKWEGNLSTPELSKIVLLSELFQVSTDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNF 118 +L D Q E P +P + +E + K Sbjct: 61 LLKEDVQPQTDTDAELPPMEAPSH-----SLRQVTLAEATAFIQAREQAAKKM 108 >UniRef50_D1PIW7 Toxin-antitoxin system, antitoxin component, Xre family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIW7_9FIRM Length = 399 Score = 85.3 bits (210), Expect = 5e-16, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 36/63 (57%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +T+GE I+ RK +Q +LA+ + +S ++ +WE+ + P+ NL AL+ L S Sbjct: 1 MTLGENIQAARKKKGLSQEALAEQVGVSRQALGKWEKDTALPSLDNLQALAAALDVSVDG 60 Query: 66 ILF 68 +L Sbjct: 61 LLG 63 >UniRef50_A6WVE6 Putative phage repressor n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6WVE6_OCHA4 Length = 235 Score = 85.3 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 4/83 (4%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 TIG+RIR R TQ+ LA I+ VSV+QWE ++P L L+++L W Sbjct: 3 TIGDRIRRARTQKGFTQQQLADHFGIARVSVTQWENNTTQPGSDKLIGLTELLGGDAEWY 62 Query: 67 LFGDEDKQPTPPVEKPVALSPKE 89 + G PP+ V ++ K+ Sbjct: 63 ITG----HGMPPISDGVRIAVKQ 81 >UniRef50_C9LBV6 Putative helix-turn-helix protein n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LBV6_RUMHA Length = 336 Score = 85.3 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 2/90 (2%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + ++I RK +Q LA+ + +S S+S+WE S P + LS+V S + Sbjct: 1 MILADKIVNLRKRAGWSQEELAEKMGVSRQSISKWEGAQSVPDMNRILKLSEVFCVSTDY 60 Query: 66 ILFGDEDKQPT--PPVEKPVALSPKELELL 93 +L D ++ P P+E+ L + E L Sbjct: 61 LLRDDIEEVPCIVNPLEEAEPLEDSKGETL 90 >UniRef50_B0MLS3 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MLS3_9FIRM Length = 301 Score = 85.3 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 36/74 (48%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +++G I++ RK TQ LA+ + +S +VS+WE + P L LS C+ Sbjct: 1 MSLGTNIQFYRKQKNMTQEDLAEFMNVSRQTVSKWESDTAFPETDKLITLSDYFGCTLDE 60 Query: 66 ILFGDEDKQPTPPV 79 ++ G ++ T Sbjct: 61 LIKGSAEENFTEDA 74 >UniRef50_Q2RSF5 Transcriptional regulator, XRE family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RSF5_RHORT Length = 196 Score = 85.3 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 26/80 (32%), Positives = 45/80 (56%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + IG+RI RK+ +Q +LAK L ++ +++ +ERG + P + L+++L S + Sbjct: 2 IEIGKRIAEARKDQGMSQYALAKLLGVNQSTIAYYERGRNTPKPWIVEDLARILNVSAAF 61 Query: 66 ILFGDEDKQPTPPVEKPVAL 85 +L+G E P PV V L Sbjct: 62 LLYGRERTDPLVPVVGRVGL 81 >UniRef50_B5CMT0 Putative uncharacterized protein n=4 Tax=Firmicutes RepID=B5CMT0_9FIRM Length = 336 Score = 85.0 bits (209), Expect = 6e-16, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 39/79 (49%) Query: 4 KNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSP 63 ++ + E+I RK +Q LA+ L +S +VS+WE S P + L ++K+ + S Sbjct: 1 MDMILSEKIAEERKKNGWSQEELAEKLSVSRQAVSKWESASSVPDLQKLLRMAKIFEVST 60 Query: 64 TWILFGDEDKQPTPPVEKP 82 ++L + K+ + Sbjct: 61 DYLLKDEMGKEEVEKISDY 79 >UniRef50_A6P2G2 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P2G2_9BACE Length = 297 Score = 85.0 bits (209), Expect = 6e-16, Method: Composition-based stats. Identities = 26/79 (32%), Positives = 39/79 (49%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 N+ G+ IR RK TQ+ LA L I+ +VS+WERG P L L++ L CS Sbjct: 1 MYNMKTGQLIRDLRKEKGMTQKELADKLHITDRAVSKWERGLCAPEISLLEPLAEALGCS 60 Query: 63 PTWILFGDEDKQPTPPVEK 81 ++ G+ + E+ Sbjct: 61 VLDLMAGERTAKAADSQEE 79 >UniRef50_B4RHZ2 Transcriptional regulator, Cro/CI family n=2 Tax=Phenylobacterium zucineum HLK1 RepID=B4RHZ2_PHEZH Length = 171 Score = 85.0 bits (209), Expect = 6e-16, Method: Composition-based stats. Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 9/104 (8%) Query: 2 ETKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQC 61 + ++ +G R+R RRK L TQ+SLA+AL ++ V ++ERG + + LF +S+VL+ Sbjct: 24 DPIDVHVGLRVRLRRKALGLTQQSLAEALDLTFQQVQKYERGANRISASTLFRISQVLEV 83 Query: 62 SPTWILFGDEDK---------QPTPPVEKPVALSPKELELLELF 96 ++ G D Q V + + L P L E F Sbjct: 84 PVSYFFDGLHDPAKVAGERFAQVYDTVLQDLLLEPNGPALAEAF 127 >UniRef50_C3LHJ4 Prophage LambdaBa02, repressor protein n=12 Tax=Bacillus cereus group RepID=C3LHJ4_BACAC Length = 122 Score = 85.0 bits (209), Expect = 7e-16, Method: Composition-based stats. Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 11/124 (8%) Query: 6 LTI-GERIRYRRKNLKHTQRSLAKALK--------ISHVSVSQWERGDSEPTGKNLFALS 56 +TI G+RI+ RK TQ +LA +K ++ ++S +E G S P+ + L +S Sbjct: 1 MTILGQRIKLSRKKRGLTQDALALKIKEKMDTETKVTKTTISNYETGYSSPSNETLVIIS 60 Query: 57 KVLQCSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVK 116 VL S ++L +D P + L + EL+++ +P+ +QD L M+A V Sbjct: 61 DVLNVSVDYLLGRSDD--PELNAVQFTELRKEFNELIDMLEKMPKEKQDMLLDMMKAAVG 118 Query: 117 NFNK 120 + K Sbjct: 119 HNKK 122 >UniRef50_Q896S6 Putative transcriptional regulator n=1 Tax=Clostridium tetani RepID=Q896S6_CLOTE Length = 126 Score = 85.0 bits (209), Expect = 7e-16, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 36/66 (54%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + I ER++ RK ++Q LA L +S ++S+WE G S P N+ LS + S + Sbjct: 1 MEISERLQQLRKLANYSQEQLADMLGVSRQAISKWESGQSNPDISNVIKLSGIYNVSTDY 60 Query: 66 ILFGDE 71 IL G E Sbjct: 61 ILIGKE 66 >UniRef50_C5EIJ5 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EIJ5_9FIRM Length = 232 Score = 85.0 bits (209), Expect = 7e-16, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 37/75 (49%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 +IG+ IR RK K +Q LA L ++ +VS WE G ++P + L A++ + Sbjct: 3 SIGKNIRNLRKQKKMSQEQLAGLLHVTRQAVSNWETGRTQPDIETLEAIAGAFDTDILMV 62 Query: 67 LFGDEDKQPTPPVEK 81 L+G ++ + Sbjct: 63 LYGRRQEEADAETRQ 77 >UniRef50_C6IZ53 Predicted protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZ53_9BACL Length = 127 Score = 84.6 bits (208), Expect = 8e-16, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 11/122 (9%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 T+GERI+Y R+ + TQ+ LA +IS V +S++E D +P + L + L S ++ Sbjct: 12 TLGERIKYLRELRQLTQKDLASQAEISVVQLSRYETNDRKPDPEVLRNIVDALDTSADYL 71 Query: 67 LFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEELL 126 L D P+P EK ++LS F PE+ ++A M A +K + + ++LL Sbjct: 72 LGRTND--PSPAAEKGMSLS---------FFGGPEAYTADEIAMMEAALKAYREQKKKLL 120 Query: 127 KA 128 Sbjct: 121 DG 122 >UniRef50_C3BBP1 Putative uncharacterized protein n=2 Tax=Bacillus RepID=C3BBP1_BACMY Length = 188 Score = 84.6 bits (208), Expect = 9e-16, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 37/73 (50%) Query: 2 ETKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQC 61 E + +G +++ RK ++Q LA L ++ +VS+WE P NL LS + Sbjct: 14 EESKMELGSKLKKLRKEHNYSQNQLADKLNVTAQAVSKWENDKCAPDIINLVQLSDLYNV 73 Query: 62 SPTWILFGDEDKQ 74 S +++ D++ Q Sbjct: 74 SLDYLIKSDKELQ 86 >UniRef50_B1SC98 Putative uncharacterized protein n=1 Tax=Streptococcus infantarius subsp. infantarius ATCC BAA-102 RepID=B1SC98_9STRE Length = 184 Score = 84.6 bits (208), Expect = 9e-16, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 34/67 (50%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + R+ RK +Q +A+ L +S ++S+WERG + P +L ++ S Sbjct: 1 MELERRLAELRKEKNVSQEEIAEKLYVSRQTISKWERGKTYPDINSLLLMANYFDVSLDH 60 Query: 66 ILFGDED 72 ++ GD D Sbjct: 61 LIKGDVD 67 >UniRef50_C0C4Y4 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C4Y4_9CLOT Length = 279 Score = 84.6 bits (208), Expect = 9e-16, Method: Composition-based stats. Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 6/98 (6%) Query: 1 METKNLT-IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVL 59 ME G+ I RK TQ+ LA+ L ++ ++S+WERG S P L L+KVL Sbjct: 1 MEINQSEKTGKFICVMRKEKNLTQKDLAQKLDVTDKAISKWERGISCPDISLLIPLAKVL 60 Query: 60 QCSPTWILFGDEDKQPTPP-----VEKPVALSPKELEL 92 + + +L G+ + P VE+ + S + +L Sbjct: 61 DVTTSELLNGERASEEQPEHAEAMVEEALHYSDRSSKL 98 >UniRef50_B6GE04 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GE04_9ACTN Length = 226 Score = 84.6 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 34/66 (51%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 + IG RIR R +Q LA + +S ++S WE G + P ++L LS++ S Sbjct: 17 GMKIGGRIRELRAIHGMSQDDLAARVYVSRQTISSWENGKTYPDVQSLLLLSEIFGASVD 76 Query: 65 WILFGD 70 ++ GD Sbjct: 77 SLIKGD 82 >UniRef50_B6FTX3 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTX3_9CLOT Length = 333 Score = 84.6 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 2/111 (1%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + E+I RK +Q LA+ + +S SVS+WE S P + LS+V S + Sbjct: 1 MILAEKIMELRKKNGWSQEELAEKIHVSRQSVSKWESSASIPDLSKILLLSQVFGVSTDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVK 116 +L +D + T E V + ++ E + E + + R K Sbjct: 61 LL--RDDIEETQKAEIFVEETVEKAAGGETIYKISLEESKEYIKDRRCAAK 109 >UniRef50_A3ICU1 Putative uncharacterized protein n=1 Tax=Bacillus sp. B14905 RepID=A3ICU1_9BACI Length = 134 Score = 84.2 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 8/136 (5%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + R++ RK K TQ LA L+ + ++S +E G S P+ + L LSK+L + + Sbjct: 1 MMFNHRLKAARKAKKLTQEQLAGKLQTTKGTISNYENGHSTPSNEMLVLLSKILDVTTDY 60 Query: 66 ILFGDEDKQPTP------PVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFN 119 +L ++ P E LS + E++ F Q + ++ F Sbjct: 61 LLGVTDNPTPVDYKLAGISDEDYNNLSAYQKEVINFFLTRENLFFKNQPENLLDALEQFE 120 Query: 120 KLFEELLKARQRTNKR 135 +E K Q+ NK+ Sbjct: 121 IYYEVWKK--QQENKK 134 >UniRef50_B4RE45 Transcriptional regulator, Cro/CI family n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RE45_PHEZH Length = 128 Score = 84.2 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 47/110 (42%) Query: 2 ETKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQC 61 + ++ +G RIR RK +Q++LA+A ++ + ++ERG + + L +++ L Sbjct: 10 DPVDVAVGARIRLLRKLKGLSQQALAEAAGVTFQQIQKYERGANRVSASMLARIARTLGV 69 Query: 62 SPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEM 111 + + P LELL+ + LP + L E Sbjct: 70 PVAEMFGEASPTSSAVDEVAALLAEPGALELLKAYADLPRGASRSALVEF 119 >UniRef50_B0MS43 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MS43_9FIRM Length = 271 Score = 84.2 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 37/63 (58%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + IG I +RK L TQ++LA+ L +S ++S+WE G S P + L ++ +L+ + Sbjct: 1 MNIGNVISEKRKALGLTQQALAEKLHVSFQAISKWENGTSCPDIELLPQIAAILKTTIDS 60 Query: 66 ILF 68 +L Sbjct: 61 LLG 63 >UniRef50_Q97IR2 Predicted transcriptional regulator n=1 Tax=Clostridium acetobutylicum RepID=Q97IR2_CLOAB Length = 110 Score = 84.2 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 4/98 (4%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M IG+RIR RK+ +TQ +LA+ L +S V VS+ E G ++ + L + K L Sbjct: 1 MYIDYSIIGDRIRNSRKSKNYTQENLAEYLDVSTVYVSKIECGKTKINLETLMKICKFLN 60 Query: 61 CSPTWILFG----DEDKQPTPPVEKPVALSPKELELLE 94 +P++IL G E+ Q + P++++L+ Sbjct: 61 ITPSYILTGSTTDSENYQKNEITDMLKTCPPEKIKLIS 98 >UniRef50_Q0AWQ8 Putative transcriptional regulator, XRE family n=2 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AWQ8_SYNWW Length = 359 Score = 84.2 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 37/80 (46%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +TI ERI RK +Q LA+ + ++SQ+E G P+ ++L LS L + Sbjct: 1 MTISERINKLRKERNMSQALLAERAGLKAPAISQYESGARSPSFESLIKLSSALGVPSDY 60 Query: 66 ILFGDEDKQPTPPVEKPVAL 85 +L G+E + + Sbjct: 61 LLLGEEAAPYEESSDSLSRM 80 >UniRef50_Q044U1 Transcriptional regulator, xre family n=4 Tax=root RepID=Q044U1_LACGA Length = 115 Score = 84.2 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 8/115 (6%) Query: 4 KNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSP 63 IG+RIR R + + +Q L+K L +S ++++WE G +EP+ L L++ S Sbjct: 1 MKSMIGDRIRELRTSHRLSQTELSKLLHVSQQTITKWENGKAEPSSGALAKLAEYFDVSA 60 Query: 64 TWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDT-QLAEMRARVKN 117 ++L D+ +P K V L ++ + P SE+D + + R KN Sbjct: 61 DYLLGSDKTSEP-----KSVDLEKD--PVVLSYGGRPVSEEDMDVIKAILERHKN 108 >UniRef50_A8SNW9 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SNW9_9FIRM Length = 242 Score = 83.8 bits (206), Expect = 1e-15, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 36/81 (44%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 IG RI+ RK Q A+ + +S +VS+WER + P L + ++L ++ Sbjct: 4 IGSRIQEYRKKAGLNQEEFAEKMGVSRQAVSKWERDKAYPDLDRLVCICEILDVQVGELV 63 Query: 68 FGDEDKQPTPPVEKPVALSPK 88 +G ++ TP S Sbjct: 64 YGKGEESETPEEVSRDGTSAN 84 >UniRef50_UPI0001C37439 XRE family transcriptional regulator n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37439 Length = 223 Score = 83.8 bits (206), Expect = 1e-15, Method: Composition-based stats. Identities = 25/77 (32%), Positives = 39/77 (50%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M + G+ I+ R L TQ+ LA+ + +S +VS+WERG+ P L AL+ V Sbjct: 21 MNMDQVKTGQLIKRLRTELGMTQKQLAERINVSDKAVSKWERGNGCPDVSLLSALADVFG 80 Query: 61 CSPTWILFGDEDKQPTP 77 +L G+ DK + Sbjct: 81 TDIRVLLSGEIDKNESE 97 >UniRef50_C8W889 Transcriptional regulator, XRE family n=2 Tax=Atopobium RepID=C8W889_ATOPD Length = 364 Score = 83.8 bits (206), Expect = 1e-15, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 54/129 (41%), Gaps = 5/129 (3%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + E+I RK +Q LA+ L +S SVS+WE S P + + +S++ S + Sbjct: 1 MLLSEKIMSLRKRNGWSQEELARQLNVSRQSVSKWESMASMPDIQKIMTMSELFGVSTDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEEL 125 +L + + P A + E E + E + ++K L E Sbjct: 61 LLKDEMEDLPATAASLDSAETSSESATPESSSQTNEKDN-----YSSTKIKVSLDLATEY 115 Query: 126 LKARQRTNK 134 L ++T++ Sbjct: 116 LDTIEKTSR 124 >UniRef50_A8RFR8 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RFR8_9FIRM Length = 258 Score = 83.8 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 38/72 (52%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +++GE+I RK +Q +LA+ + + ++S+WE P + L LS + + S + Sbjct: 1 MSLGEKIFKLRKEKGLSQEALAEQVGTTRQAISKWENDQGFPETEKLLRLSNIFEVSTDY 60 Query: 66 ILFGDEDKQPTP 77 +L ++ + + Sbjct: 61 LLKDEKTVKDSE 72 >UniRef50_A4E806 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E806_9ACTN Length = 238 Score = 83.8 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 6/86 (6%) Query: 4 KNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSP 63 N+ +R+ R++ +Q LA+ L +S +VS+WER +S P +NL +L+K+ S Sbjct: 1 MNVETAQRLADLRRSKGFSQEGLARKLGLSRQAVSKWERAESSPDTENLISLAKLYGVSL 60 Query: 64 TWILFGDEDKQPTPPVEKPVALSPKE 89 +L P+ +E + ++ Sbjct: 61 DELL------NPSDEIEDDIEFENED 80 >UniRef50_Q3AB02 DNA-binding protein n=2 Tax=Clostridia RepID=Q3AB02_CARHZ Length = 127 Score = 83.8 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 3/123 (2%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 ME IG+RIR R+ L+ ++ A+ L +S V Q ERG+ + + L +++ L Sbjct: 1 MEINTKAIGQRIREEREKLELSREEFAEILGLSDYYVGQLERGERQMSLPVLVNIAQCLH 60 Query: 61 CSPTWILFGDEDKQPT---PPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKN 117 S +++FG +P+ + L + ELL L + E + ++ + Sbjct: 61 VSLDYLIFGSTPFEPSGVQENISFYNFLQNLDPELLSLLSKCSHDELELFKKLIKTILPY 120 Query: 118 FNK 120 K Sbjct: 121 LGK 123 >UniRef50_B9Y7G8 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=B9Y7G8_9FIRM Length = 647 Score = 83.8 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 3/87 (3%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + E I+ RRK TQ LA+ +S +VS+WE G S P+ L L+ S Sbjct: 1 MKLAENIQRRRKAAGWTQEQLAQKCAVSRQAVSKWEAGQSVPSLDKLRQLANCFGISVDE 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELEL 92 ++ +D P + SP +EL Sbjct: 61 LV---QDDPAAEPADAHQTGSPSLVEL 84 >UniRef50_B7C9Y7 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9Y7_9FIRM Length = 334 Score = 83.4 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 38/71 (53%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + ++I RK TQ LA+ L +S SVS+WE + P K + L+ + + S + Sbjct: 16 MILADKIIEERKKNGWTQEDLAQKLGVSRQSVSKWESAGAIPDLKKIIQLADLFEVSTDY 75 Query: 66 ILFGDEDKQPT 76 +L + +K+ T Sbjct: 76 LLKDEIEKENT 86 >UniRef50_B5YSQ0 Putative repressor protein n=16 Tax=Escherichia coli RepID=B5YSQ0_ECO5E Length = 219 Score = 83.4 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 1/75 (1%) Query: 1 METKNL-TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVL 59 M+ K + ++G R++ RK+ TQ L K ++ V++ WE+ +EP K L L++ L Sbjct: 1 MQEKMMESLGFRLKRLRKDKGLTQVELGKLSGVTGVTIGYWEKDLNEPGSKALSKLAQAL 60 Query: 60 QCSPTWILFGDEDKQ 74 + +++L+G + Sbjct: 61 GTTESYLLYGVSSPE 75 >UniRef50_B1R6G0 Helix-turn-helix domain protein n=3 Tax=Clostridium perfringens RepID=B1R6G0_CLOPE Length = 268 Score = 83.4 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 7/100 (7%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + E+++ RK +Q LA+ L IS +VS+WE G S P L LS++ + + Sbjct: 1 MKLAEKLQLIRKREGLSQEDLAEKLGISRQAVSKWESGQSVPDLNKLIILSELYNVTIDY 60 Query: 66 I------LFGDEDKQPTPPVEKP-VALSPKELELLELFNA 98 + G ++K+ + ++ L KE +L+ FN Sbjct: 61 LVKETYEFEGSQEKEISNTGKQYGENLENKETQLIIHFNN 100 >UniRef50_C3RJ47 Predicted protein n=2 Tax=Bacteria RepID=C3RJ47_9MOLU Length = 264 Score = 83.4 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 36/68 (52%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 N IG RI RKNL +TQ+ L + +S +VS+WERG P L LS+ L+ S Sbjct: 1 MDNKEIGIRILSARKNLGYTQKQLGNLINVSDKAVSKWERGIGCPDISLLLPLSEALKMS 60 Query: 63 PTWILFGD 70 ++ G Sbjct: 61 IDELIGGT 68 >UniRef50_C0EBZ8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0EBZ8_9CLOT Length = 172 Score = 83.4 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 47/83 (56%), Gaps = 1/83 (1%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + E+I+ RK + +Q LA+ + +S ++++WE G + P + + +LS+ + S + Sbjct: 8 MKLPEKIQRERKKMGLSQEKLAEKIGVSRQAITKWENGLASPELEKIVSLSECFKVSTDY 67 Query: 66 ILFGDEDKQPTPPVEKPVALSPK 88 +L D +PTPP E + + + Sbjct: 68 LLK-DNITEPTPPQESALKGNKR 89 >UniRef50_A7JUV7 Putative uncharacterized protein n=1 Tax=Mannheimia haemolytica PHL213 RepID=A7JUV7_PASHA Length = 160 Score = 83.4 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 12/132 (9%) Query: 4 KNLTIGERIRYRRKNLKHTQRSLAKALK-ISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 K + G RI RKN K ++ + AL I+ ++ WE EP L ALS++L Sbjct: 7 KVIGFGNRIEQSRKNAKLSRSEVCDALGGIAISTLQAWEADTREPPISKLMALSQILNVE 66 Query: 63 PTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLF 122 P ++L G+ Q +P ++ P++E+ + ++A+++ + Sbjct: 67 PCYLLTGERHSQSLNVTREPQP----------VYATKPQTEEGEVVV-IKAKLQEAIETL 115 Query: 123 EELLKARQRTNK 134 EE+L+ QR K Sbjct: 116 EEVLEITQREMK 127 >UniRef50_C7HWC9 Transcriptional regulator n=2 Tax=Anaerococcus RepID=C7HWC9_9FIRM Length = 166 Score = 83.0 bits (204), Expect = 2e-15, Method: Composition-based stats. Identities = 26/73 (35%), Positives = 40/73 (54%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 IG++I+ +RK L TQ LAK L IS +VS+WE+ SEP+ NL LS++ + Sbjct: 2 IGQKIKNKRKELNLTQEYLAKELNISRQAVSKWEKEISEPSMDNLIKLSEIFGVDIGYFK 61 Query: 68 FGDEDKQPTPPVE 80 E++ + Sbjct: 62 NEKEEESKIRKIF 74 >UniRef50_A9KS31 Transcriptional regulator, XRE family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KS31_CLOPH Length = 276 Score = 83.0 bits (204), Expect = 2e-15, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 2/70 (2%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M+ + + + I +RK K TQ+ LA L ++ +VS+WERG S P L LS +L Sbjct: 1 MDNEKMAL--FIADQRKIKKLTQKELAAKLGVTDKAVSKWERGLSCPDISLLSTLSDILG 58 Query: 61 CSPTWILFGD 70 + +L G+ Sbjct: 59 VTTGELLNGE 68 >UniRef50_B2TZ32 Helix-turn-helix domain protein n=4 Tax=root RepID=B2TZ32_SHIB3 Length = 109 Score = 83.0 bits (204), Expect = 2e-15, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 42/90 (46%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 ++ KN I R+R +R+ T LA+ L + + QWE G+ EPT L L+ +L Sbjct: 3 LQNKNSAINNRLRTQREACGLTTAELARLLDLDEEIIIQWESGEYEPTISMLIPLANILG 62 Query: 61 CSPTWILFGDEDKQPTPPVEKPVALSPKEL 90 C P W+L G+ P E+ + Sbjct: 63 CDPMWLLTGEVTPPEQPKSEEQQHHDASQQ 92 >UniRef50_A6NW39 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NW39_9BACE Length = 210 Score = 83.0 bits (204), Expect = 2e-15, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 62/149 (41%), Gaps = 25/149 (16%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + ERI R+ +Q L +AL +S +VS+WE G ++P + + + ++ S + Sbjct: 1 MELNERIAAARRAAGMSQEQLGEALGVSRQAVSKWESGQTKPDLEAVGKMCELFHLSADY 60 Query: 66 ILFGDEDKQPTPPVEKPVAL-------------------------SPKELELLELFNALP 100 +L G E+K+ + +P+E + L + +P Sbjct: 61 LLLGKEEKKDDGSSAQAQPQPQAQSQNQTQYTSGGYSLVLVDTNPTPRETLHMLLNSGMP 120 Query: 101 ESEQDTQLAEMRARVKNFNKLFEELLKAR 129 E E D + + A + + L E +A+ Sbjct: 121 EEEVDRLIESLPAVLASGLSLEEAYRRAK 149 >UniRef50_B7DTD3 Transcriptional regulator, XRE family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DTD3_9BACL Length = 205 Score = 83.0 bits (204), Expect = 2e-15, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 45/110 (40%), Gaps = 5/110 (4%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWER--GDSEPTGKNLFALSKVLQCSP 63 ++ +R++ R+ +Q LA+ L I S++ +E D P + L ++ + Sbjct: 1 MSFSDRLKTLREQRGISQERLAEILGIPRSSIAHYESPENDRLPRPERLKKIADFFGVTT 60 Query: 64 TWILFGDEDKQPTPPV---EKPVALSPKELELLELFNALPESEQDTQLAE 110 +++ D V + ++ +E LLE LP ++ + Sbjct: 61 DYLIGRTNDPHGHAIVNFADSEPIVTAEERRLLETVRELPPEKKQELMDF 110 >UniRef50_C6PS92 Transcriptional regulator, XRE family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PS92_9CLOT Length = 120 Score = 83.0 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 47/86 (54%), Gaps = 6/86 (6%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + I ER++ RK+ +++Q LA+ L ++ ++S+WE P N+ LS++ S + Sbjct: 1 MGISERLQKLRKDERYSQEQLAEKLGVTRQAISKWESNQGNPDINNIIKLSEIYNVSTDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELE 91 +L G+E + KP+ + KE + Sbjct: 61 LLKGEE------QISKPIEIDSKENK 80 >UniRef50_A6NZN1 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NZN1_9BACE Length = 171 Score = 83.0 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 1/73 (1%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +T E+++ RK +Q LA+ L +S ++S+WE G P N+ +S+ CS + Sbjct: 1 MTFSEKLQRLRKVNGLSQEQLAEKLNVSRQAISKWEMGA-IPDMDNVIKISRFFDCSLDY 59 Query: 66 ILFGDEDKQPTPP 78 ++ + ++ P Sbjct: 60 LMNNEAEETSIKP 72 >UniRef50_C6LAB0 Putative helix-turn-helix protein n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LAB0_9FIRM Length = 330 Score = 83.0 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 49/113 (43%), Gaps = 8/113 (7%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + E+I RK +Q LA+ L++S SVS+WE G S P L ALS++ + + Sbjct: 1 MILAEKIMDLRKKNGWSQEELAQQLRVSRQSVSKWEGGQSVPDLDKLLALSQIFGVTLDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNF 118 ++ ++ + +L + + E D LA ++ + Sbjct: 61 LV--KDEISSEEVQYTATDIPEDDLPHVSV------EEADAFLATVQTAARQI 105 >UniRef50_C0FPM6 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FPM6_9FIRM Length = 305 Score = 83.0 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 2/104 (1%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 ME + IG+ IR +R TQ+ LA+ ++++ +VS+WE G P L L++ L Sbjct: 1 MEKEK--IGKYIRKKRIEKGMTQQQLAEKIQVTEKAVSRWETGRGVPDISLLEPLAEELH 58 Query: 61 CSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQ 104 S T +L G+E Q + ++ ++ + + E+ Sbjct: 59 VSVTELLNGEERVQEEAVHDTKAHMADIDITNVIEYVQENRKEK 102 >UniRef50_C4G5J1 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G5J1_ABIDE Length = 115 Score = 83.0 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 3/112 (2%) Query: 1 METKNL-TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVL 59 M+ NL IG+RIR R K TQ L++ L + +++ E+G+ T + LS + Sbjct: 1 MDMMNLVEIGKRIRSLRYESKLTQTKLSEYLSLDQSMIAKIEKGERNITSDVIEKLSALF 60 Query: 60 QCSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNA--LPESEQDTQLA 109 C+ ++LFG+ +Q + L+ +L+ L + N L + E D L Sbjct: 61 CCTVDYLLFGENQEQKCTVSFRTNNLTSDDLKALAIINKIVLNQFEMDKMLE 112 >UniRef50_B3IN07 Repressor protein C2 n=2 Tax=Escherichia coli RepID=B3IN07_ECOLX Length = 224 Score = 83.0 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 41/90 (45%), Positives = 58/90 (64%), Gaps = 5/90 (5%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M+ TI ERIR RRK++ TQ+ +AKA+ IS VSV++WE G S+P G+NL+ LSK+L Sbjct: 1 MKN---TISERIRNRRKDVGLTQQQVAKAIGISRVSVTKWENGSSKPDGENLYLLSKLLS 57 Query: 61 CSPTWILFGDE--DKQPTPPVEKPVALSPK 88 SP WIL+G + DK + + +S Sbjct: 58 KSPEWILYGKDGHDKADDLRLNQYPYISDN 87 >UniRef50_B0NE21 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NE21_EUBSP Length = 257 Score = 83.0 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 36/75 (48%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + E++ R+ +Q LA L I+ SVS+WE G + P L LS++ Q S + Sbjct: 1 MEFSEKLIQLRRKQGMSQEQLADRLGITRQSVSKWESGSAAPELSKLITLSEMFQVSIDY 60 Query: 66 ILFGDEDKQPTPPVE 80 ++ E+ + E Sbjct: 61 LVKDAEEPKGAEKEE 75 >UniRef50_Q28T13 Transcriptional regulator, XRE family n=20 Tax=Rhodobacterales RepID=Q28T13_JANSC Length = 126 Score = 83.0 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 52/114 (45%), Gaps = 6/114 (5%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 ++ +G+RIR+RR + TQ+ LA+ + I + ++E G + + L+ + + L Sbjct: 6 DVHVGKRIRHRRWMVGRTQQQLAETVGIKFQQIQKYETGMNRVSASRLWDIGEALDVPVA 65 Query: 65 WILFGDEDKQPTPPVEKPVAL------SPKELELLELFNALPESEQDTQLAEMR 112 + G ++ AL + LEL+ + A+PE+++ R Sbjct: 66 YFFEGVGSEEVASDTATGEALPGDLLADREALELVRSYYAIPENQRRRLFDLAR 119 >UniRef50_B1C9S1 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C9S1_9FIRM Length = 275 Score = 83.0 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 36/66 (54%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 IG I RK TQ+ LA L I++ ++S+WERG S P L LS +L + IL Sbjct: 6 IGTFICSLRKEKNLTQKELADKLNITNKAISKWERGISCPDISLLIPLSDILDVTTNEIL 65 Query: 68 FGDEDK 73 G+ ++ Sbjct: 66 NGEREE 71 >UniRef50_A7VII3 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VII3_9CLOT Length = 101 Score = 83.0 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 37/66 (56%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + I ERIR R+ + TQ +LA AL IS +V+ W+ G S+P+ L L+ S + Sbjct: 3 MDISERIRELREVIGITQSNLASALNISRSAVNAWKMGTSKPSIDTLVDLADFFHVSTDY 62 Query: 66 ILFGDE 71 +L +E Sbjct: 63 LLGRNE 68 >UniRef50_B9YDL2 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDL2_9FIRM Length = 400 Score = 83.0 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M+ + + G+RI RK TQ+ LA L +++ ++S+WERG+ P L L+ L Sbjct: 1 MDAEAM--GKRIAQLRKARNLTQQQLADQLNVTNRAISRWERGEGYPEITLLPKLADSLG 58 Query: 61 CSPTWILFGDEDKQP 75 + IL KQP Sbjct: 59 VTTDEILGHRTRKQP 73 >UniRef50_A9L6K9 Putative phage repressor n=1 Tax=Shewanella baltica OS195 RepID=A9L6K9_SHEB9 Length = 214 Score = 83.0 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 41/68 (60%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 + RI+ +RK L Q+ +AK + ++ ++S WER + P+G+ L L+ VL+ + W+L Sbjct: 4 LSNRIKTKRKILGLKQKDVAKLMDVTSQAISSWEREVTNPSGELLLKLANVLKVNEGWLL 63 Query: 68 FGDEDKQP 75 +GD K Sbjct: 64 YGDTFKND 71 >UniRef50_Q7N301 Similar to bacteriophage repressor protein CI n=1 Tax=Photorhabdus luminescens subsp. laumondii RepID=Q7N301_PHOLL Length = 212 Score = 82.6 bits (203), Expect = 3e-15, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +TI ER++ RR + TQ LA + S+ Q E+G ++ + L L+ LQCS ++ Sbjct: 1 MTIAERVKTRRIEMGLTQTELADLIGTKQQSIEQLEKGKTK-RPRFLPELAVALQCSVSY 59 Query: 66 ILFGDEDKQPT 76 +L+G EDK+ Sbjct: 60 LLYGTEDKKEE 70 >UniRef50_D2U1N2 Phage transcriptional regulator n=1 Tax=Arsenophonus nasoniae RepID=D2U1N2_9ENTR Length = 230 Score = 82.6 bits (203), Expect = 3e-15, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 T+ ERI+ R K TQ LA+ L ++ SV QWE +EP L ++ VL + W+ Sbjct: 3 TMHERIKQARLAKKMTQAELAEKLSVTPQSVQQWET-STEPKKNRLMKIADVLDINVNWL 61 Query: 67 LFGDEDKQP 75 LFG++ + Sbjct: 62 LFGEKKNKD 70 >UniRef50_A7FIY9 Repressor protein C2 n=2 Tax=Yersinia RepID=A7FIY9_YERP3 Length = 236 Score = 82.6 bits (203), Expect = 3e-15, Method: Composition-based stats. Identities = 32/80 (40%), Positives = 47/80 (58%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 + + +RIR RR L TQ LAKA+ +S VSV++WE G ++P G+NL L++ L Sbjct: 14 ISYMKTEMNDRIRLRRLQLDLTQLQLAKAIGVSRVSVTKWESGITKPDGENLHRLAQTLS 73 Query: 61 CSPTWILFGDEDKQPTPPVE 80 C+P WIL+G D + Sbjct: 74 CTPEWILYGTGDLRQADDTN 93 >UniRef50_C8W874 Transcriptional regulator, XRE family n=2 Tax=Atopobium RepID=C8W874_ATOPD Length = 235 Score = 82.6 bits (203), Expect = 3e-15, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 34/69 (49%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M T + T+G RI R TQ LAK L +S +VS+WE + P L L++ L Sbjct: 1 MTTSSETLGRRIARLRLAKTATQERLAKELNVSPQAVSKWESDINYPDISLLPDLARFLG 60 Query: 61 CSPTWILFG 69 S +L G Sbjct: 61 VSVDELLSG 69 >UniRef50_Q1CP27 Transcriptional regulator, Cro/CI family n=8 Tax=root RepID=Q1CP27_STRPF Length = 271 Score = 82.6 bits (203), Expect = 3e-15, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 61/116 (52%), Gaps = 7/116 (6%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKI-SHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 +G+RIR R+ TQ L++ L + ++ +VS+WE+ ++ P GK+L L+++ + ++ Sbjct: 24 LGDRIRKLREGRNMTQTELSEILGMKTYTTVSKWEKNENFPKGKDLKKLAEIFNVTSDYL 83 Query: 67 LFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLF 122 L + K + + ++ E++ ++N L + Q+ L +++ NK Sbjct: 84 LGLTDSKL------GKITIQNEQPEIVSIYNQLEQPRQEKVLNFANEQLEEQNKTV 133 >UniRef50_C6JQJ3 Putative uncharacterized protein n=2 Tax=Fusobacterium RepID=C6JQJ3_FUSVA Length = 168 Score = 82.6 bits (203), Expect = 3e-15, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 7/81 (8%) Query: 11 RIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFGD 70 +I+ RK +Q LA+ L +S SVS+WE G S P + LS + + + ++L Sbjct: 6 KIQQLRKQNGMSQEKLAQLLGVSKQSVSKWESGQSLPEIDKIIQLSNIFEVTTDYLL--- 62 Query: 71 EDKQPTPPVEKPVALSPKELE 91 EK + + KE E Sbjct: 63 ----KDVSEEKCIDILRKEKE 79 >UniRef50_C7GAS5 DNA-binding protein n=6 Tax=Clostridiales RepID=C7GAS5_9FIRM Length = 252 Score = 82.6 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 3/100 (3%) Query: 2 ETKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQC 61 + N G + RK + TQ+ LA L +S +VS+WERG+S P L ++ VL Sbjct: 3 QINNEKFGHFLAEVRKEKQMTQKDLADKLFVSDKTVSKWERGNSMPNVTLLIPIADVLGI 62 Query: 62 SPTWILFGD---EDKQPTPPVEKPVALSPKELELLELFNA 98 + T +L G+ E+K V + + ++ +L L + Sbjct: 63 TVTELLQGEKLKENKTLNSDVVETLVVNSLDLSLRDTIRQ 102 >UniRef50_D2LZS5 Transcriptional regulator, XRE family n=2 Tax=Bacillus RepID=D2LZS5_BACS4 Length = 207 Score = 82.6 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 47/87 (54%), Gaps = 1/87 (1%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +++G I +RK+L +Q +A L +S +VS+WE S+P+ +NL ++ + +C Sbjct: 1 MSLGSNINNKRKSLNLSQEYVADQLGVSRQAVSKWENNLSKPSTQNLIKMATLFECDIKE 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELEL 92 ++ D+ + +E S K++ + Sbjct: 61 LVSSDKFMEKQKNLENQTE-SKKDIRM 86 >UniRef50_Q2W6H5 Predicted transcriptional regulator n=14 Tax=Alphaproteobacteria RepID=Q2W6H5_MAGSA Length = 167 Score = 82.6 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 29/125 (23%), Positives = 55/125 (44%), Gaps = 17/125 (13%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 ++ +G R+R RR L +Q L +A+ ++ V ++ERG + LF LS+VL + Sbjct: 33 DVHVGGRMRLRRTLLGMSQEKLGEAIGLTFQQVQKYERGANRIGASRLFDLSRVLDVPIS 92 Query: 65 WIL----------------FGDEDKQPTPPVEKPVALSPKE-LELLELFNALPESEQDTQ 107 + G + TP +P + +E LEL+ + +PE ++ Sbjct: 93 YFFDDMADQVQAQSPVNIIKGSAEPSETPAGFEPDPMMKRETLELVRAYYRVPEQQRRRI 152 Query: 108 LAEMR 112 ++ Sbjct: 153 YDLIK 157 >UniRef50_Q8DUT3 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=Q8DUT3_STRMU Length = 296 Score = 82.3 bits (202), Expect = 4e-15, Method: Composition-based stats. Identities = 27/71 (38%), Positives = 38/71 (53%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +T R+R RK L +Q LA+ L IS ++++WE G P NL ALS Q S Sbjct: 3 MTFETRLRDYRKQLGLSQEKLAEELHISRQAITKWESGAGTPDVVNLMALSDFFQVSIDQ 62 Query: 66 ILFGDEDKQPT 76 +LFG E + + Sbjct: 63 LLFGKEANRQS 73 >UniRef50_C7N384 Predicted transcriptional regulator n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N384_SLAHD Length = 200 Score = 82.3 bits (202), Expect = 4e-15, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 36/66 (54%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + GE+++ RK TQ LA+AL +S +VS+WE G P+ +L +S+ + Sbjct: 1 MEFGEKLQELRKARSLTQEQLAEALYVSRTAVSKWESGRGYPSIDSLKEVSRFFSVTIDE 60 Query: 66 ILFGDE 71 ++ DE Sbjct: 61 LISPDE 66 >UniRef50_B8FXI2 Transcriptional regulator, XRE family n=2 Tax=Desulfitobacterium hafniense RepID=B8FXI2_DESHD Length = 322 Score = 82.3 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 37/76 (48%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + E+I RK+ +Q LA+ + +S S+S+WE + P + L+++ + + Sbjct: 1 MILAEKILSLRKSNGWSQEELAEKMNVSRQSISKWESAAAIPDINRILELARLFGVTTDY 60 Query: 66 ILFGDEDKQPTPPVEK 81 +L D + ++ Sbjct: 61 LLKDDFETAVYSGADE 76 >UniRef50_B7LNL7 Repressor protein C2 n=5 Tax=Enterobacteriaceae RepID=B7LNL7_ESCF3 Length = 208 Score = 82.3 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 38/65 (58%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 T+G+RI+ R+ + +Q+ L K +S V+V WE+ + P G+ L L+K S +I Sbjct: 3 TVGQRIKALRRVTRTSQKELGKFCGVSDVAVGYWEKDINVPGGEALSKLAKFFNTSIDYI 62 Query: 67 LFGDE 71 L+G E Sbjct: 63 LYGAE 67 >UniRef50_B1C771 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C771_9FIRM Length = 219 Score = 82.3 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 34/68 (50%) Query: 4 KNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSP 63 + E++ RK TQ LA L +S +VS+WE G P+ +L +S+V + Sbjct: 18 IEVEFNEKLVLIRKEKGLTQEELASLLFVSRTAVSKWESGRGYPSIDSLKEISRVFGVTI 77 Query: 64 TWILFGDE 71 +L GDE Sbjct: 78 DELLCGDE 85 >UniRef50_C7N6T3 Predicted transcriptional regulator n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N6T3_SLAHD Length = 196 Score = 82.3 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 34/65 (52%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + +G RIR R +Q LA+ + +S +VS WE G + P ++L +S + S Sbjct: 1 MEVGNRIREERDRANLSQEGLAEKIFVSRQTVSNWETGKTYPDVQSLLLMSNLFGVSIDS 60 Query: 66 ILFGD 70 ++ GD Sbjct: 61 LVKGD 65 >UniRef50_A4WB55 Transcriptional regulator, XRE family n=8 Tax=Enterobacteriaceae RepID=A4WB55_ENT38 Length = 145 Score = 82.3 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 1/127 (0%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 N+ ER+ +Q L + + ++ +VS W + P + L K L Sbjct: 11 NMNFEERLLRALDEAGISQSELGRRVGVNSQTVSNWCNTGNFPRKEKLALFPKALGKPLY 70 Query: 65 W-ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFE 123 W L +E+ L+ ++ LLE+F+ LPE EQ + R++ +K Sbjct: 71 WFFLTDEEEAHLNATSASKTVLNEQQAALLEIFDQLPEVEQTRFMQLASDRLEELDKFMA 130 Query: 124 ELLKARQ 130 E L R+ Sbjct: 131 EFLSKRK 137 >UniRef50_B1CBT7 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CBT7_9FIRM Length = 310 Score = 82.3 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 35/94 (37%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 + ++ RK +Q LA+ L +S +VS+WE G S P L L + + Sbjct: 1 MDKMNFNTNLQNLRKIHNLSQEQLAEKLDVSRQAVSKWENGTSYPEMDKLLILCDIFSLN 60 Query: 63 PTWILFGDEDKQPTPPVEKPVALSPKELELLELF 96 ++ G+ E + + ++ Sbjct: 61 MDELVKGNISLDDNSFKEDKALYENAQNKFSKMI 94 >UniRef50_B3G141 Hypothetical bacteriophage protein n=1 Tax=Pseudomonas aeruginosa RepID=B3G141_PSEAE Length = 108 Score = 82.3 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 8/103 (7%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 +G+RIR R L A+ L ++ +V++WE ++ P G +L L P WIL Sbjct: 1 MGDRIRQIRGGLGV--GEFAERLGVNRKTVARWESNEALPDGASLLTLHSCFGADPGWIL 58 Query: 68 FGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAE 110 G + P L+P E LL+ + P Q A Sbjct: 59 TGGGAQP------GPAELAPDERILLDNYRHSPPDAQAALKAT 95 >UniRef50_A8SXS8 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SXS8_9FIRM Length = 268 Score = 82.3 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 1/79 (1%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 IG RI RK + +Q A + +S +VS+WE + P L + + S ++ Sbjct: 4 IGSRILEYRKKMNMSQEEFANKIGVSRQAVSKWELDKAYPDLDKLVDICGMFGLSLDELV 63 Query: 68 FG-DEDKQPTPPVEKPVAL 85 G ++D++P E+ V + Sbjct: 64 NGVEQDEEPVMEAEQRVEI 82 >UniRef50_B4ESL5 Phage reprossor n=2 Tax=Enterobacteriaceae RepID=B4ESL5_PROMH Length = 233 Score = 81.9 bits (201), Expect = 5e-15, Method: Composition-based stats. Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 T+ ERI+ R TQ LA+ + +S SV QWE +EP + ++++L+ W+ Sbjct: 3 TMRERIKQARLAKNMTQAELAELVGVSPQSVQQWET-STEPRKNRVIKIAEILEVDTNWL 61 Query: 67 LFGDEDKQPTPPVE 80 LFG D V Sbjct: 62 LFGITDIDERNKVS 75 >UniRef50_B6GBG4 Putative uncharacterized protein n=2 Tax=Collinsella RepID=B6GBG4_9ACTN Length = 320 Score = 81.9 bits (201), Expect = 5e-15, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 3/87 (3%) Query: 2 ETKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQC 61 E ++ + + Y R TQ LA L ++ +VS+WE G S P L L ++ + Sbjct: 5 ERDTMSFRDNLLYLRDARNMTQEQLAMLLGVTRQAVSKWESGASTPDMDRLVRLCEIFEV 64 Query: 62 SPTWILFGDEDKQPTPPVEKPVALSPK 88 ++ GD +P V++ +A+ P Sbjct: 65 DLDDLIRGDVTARP---VDQALAIPPD 88 >UniRef50_A6NPM4 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NPM4_9BACE Length = 253 Score = 81.9 bits (201), Expect = 6e-15, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 7/106 (6%) Query: 2 ETKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQC 61 + G + R+ TQ+ LA+ L +S +VS+WERG S P L ++ L Sbjct: 3 DIDKERFGGFLLQLRREKNLTQKELAERLFVSDKAVSKWERGLSLPDVGLLLPMADCLGV 62 Query: 62 SPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQ 107 + T +L G+ PVE+ AL L L E E+ Q Sbjct: 63 TVTELLRGERTAAAQLPVEEVEALVKSTL-------QLTEEERQAQ 101 >UniRef50_Q5DY86 DNA-binding protein RDGA n=1 Tax=Vibrio fischeri ES114 RepID=Q5DY86_VIBF1 Length = 203 Score = 81.9 bits (201), Expect = 6e-15, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 45/66 (68%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 I R++ +RK L+++QR LA + ++ ++SQWER ++ P G++L L++VL C+ W+ Sbjct: 3 EISIRLKEKRKALRYSQRKLADLVNVTTSAISQWEREETTPKGEHLVRLAEVLNCTVQWL 62 Query: 67 LFGDED 72 + ++D Sbjct: 63 VGTEDD 68 >UniRef50_B0T4G6 Transcriptional regulator, XRE family n=20 Tax=cellular organisms RepID=B0T4G6_CAUSK Length = 171 Score = 81.9 bits (201), Expect = 6e-15, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 9/118 (7%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 +L +G R+R RRK L +Q LA AL ++ V ++ERG + + L+ ++K LQ Sbjct: 40 VVDLHVGGRVRMRRKMLGISQEHLADALGLTFQQVQKYERGANRVSASKLYEIAKTLQVP 99 Query: 63 PTWIL---------FGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEM 111 ++ GD+ + V +P+ LEL +F + + Q+ ++ Sbjct: 100 VSYFFEGLADPVTDEGDDAGEAANRVITDFLNTPEGLELAAIFPKIGKGRVRRQILDL 157 >UniRef50_C4F7J1 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F7J1_9ACTN Length = 217 Score = 81.9 bits (201), Expect = 6e-15, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 5/93 (5%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 + IG IR +R+ L +Q+ LA+A +S ++S WE G + P +++ L++V + Sbjct: 1 MEGTGIGTGIRIQRERLGMSQQDLAQACMVSRQTISNWETGKTLPDIQSMAYLAEVFGVT 60 Query: 63 PTWILFGDEDKQPTPPVEKPVALSPKELELLEL 95 ++ Q P + K V++ +EL LL L Sbjct: 61 VDDLV-----NQVAPELGKRVSVDKRELLLLTL 88 >UniRef50_C7H2U3 Putative helix-turn-helix protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2U3_9FIRM Length = 208 Score = 81.9 bits (201), Expect = 6e-15, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 38/69 (55%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 K + E+++ RK+ TQ LA+AL +S ++S+WE G P+ +L +S+ S Sbjct: 1 MKEVEFHEKLQELRKSRGLTQEELAEALFVSRTAISKWESGRGYPSIDSLKEISRYFSVS 60 Query: 63 PTWILFGDE 71 +L GD+ Sbjct: 61 IDELLSGDQ 69 >UniRef50_B7AVZ0 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AVZ0_9BACE Length = 368 Score = 81.5 bits (200), Expect = 7e-15, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 36/70 (51%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + ++I RK +Q LA+ L +S SVS++E S P + LS++ + + Sbjct: 1 MILADKIINLRKKNGWSQEELAERLGVSRQSVSKYEGAQSVPDLDKILKLSEIFGVTTDY 60 Query: 66 ILFGDEDKQP 75 ++ D +++ Sbjct: 61 LIKDDIEEEQ 70 >UniRef50_Q1NQ27 Helix-turn-helix motif n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NQ27_9DELT Length = 109 Score = 81.5 bits (200), Expect = 7e-15, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 41/82 (50%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + +G+RIR RR+ L +QR LA L I+ ++ +WERG++ P + L L +L+ W Sbjct: 1 MNVGQRIRSRRQVLGLSQRELAARLGITFQAIQRWERGETFPRKETLPQLLAILEVGADW 60 Query: 66 ILFGDEDKQPTPPVEKPVALSP 87 ++ P P L Sbjct: 61 LVGTPSLAGPDVSTIPPDVLEA 82 >UniRef50_C7G7I6 Toxin-antitoxin system, antitoxin component, Xre family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G7I6_9FIRM Length = 187 Score = 81.5 bits (200), Expect = 7e-15, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 1/83 (1%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 + IG +I RK TQ LA+ L +S ++S+WE + P +++ +S++ S Sbjct: 14 KMEIGNKINQLRKLSGMTQEQLAEKLNVSRQTISKWESDSTSPDLESIVKISRIFHVSLD 73 Query: 65 WILFGDEDKQPTPPVEKPVALSP 87 +L + + ++ + L Sbjct: 74 DLLK-EGEAGVANKTDEQITLED 95 >UniRef50_A9VI55 Transcriptional regulator, XRE family n=68 Tax=Bacillaceae RepID=A9VI55_BACWK Length = 149 Score = 81.5 bits (200), Expect = 9e-15, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 36/67 (53%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + ER++ R+ +Q LA+ + +S SVS+WE G + P+ + + LS + + Sbjct: 1 MIFSERLKEEREKRNWSQNDLAEKIHVSRQSVSKWETGKNYPSIEIIIHLSDLFGITIDE 60 Query: 66 ILFGDED 72 +L DE+ Sbjct: 61 LLRSDEE 67 >UniRef50_UPI0001C36E3B hypothetical protein RflaF_04317 n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C36E3B Length = 322 Score = 81.1 bits (199), Expect = 9e-15, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + +++ RK +Q LA+ L +S SVS+WE S P + +SK+ S + Sbjct: 1 MIFADKLIELRKKSGMSQEELAEKLGVSRQSVSKWEGAQSTPDLNRILEISKIFDVSTDY 60 Query: 66 ILFGDEDKQPTPPVEKPVA 84 +L DE + EK ++ Sbjct: 61 LLK-DEIEAGKEISEKSIS 78 >UniRef50_C3RNM0 Predicted protein n=3 Tax=Bacteria RepID=C3RNM0_9MOLU Length = 287 Score = 81.1 bits (199), Expect = 9e-15, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 40/78 (51%) Query: 4 KNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSP 63 N+ I R+ RK +Q +LA L IS +VS+WER ++ P NL L+K+ S Sbjct: 13 MNIEIANRLVRLRKEKNLSQEALANELGISRQAVSKWERAEASPDTDNLILLAKLYGMSL 72 Query: 64 TWILFGDEDKQPTPPVEK 81 +L D+ + + ++ Sbjct: 73 DDLLKTDQKEFESGNNQQ 90 >UniRef50_C5WHH0 Putative uncharacterized protein n=4 Tax=Firmicutes RepID=C5WHH0_STRDG Length = 257 Score = 81.1 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 2/83 (2%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + GE++ RK +Q +LA+ + + ++S+WE P + L LS V + S + Sbjct: 1 MNFGEKLFKLRKEKGISQENLAEQIGTTRQAISKWENNQGFPEVEKLLQLSNVFEVSVDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPK 88 +L +DK EK +S + Sbjct: 61 LL--KDDKTVNCSNEKGYYVSKE 81 >UniRef50_C7GBK6 Transcriptional regulator of NagC/XylR family, sugar n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GBK6_9FIRM Length = 403 Score = 81.1 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 37/70 (52%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +T+ E I+ R Q A+ L IS +VS+WE G S P+ +NL +S++L S Sbjct: 26 MTMAENIKTYRNKRGLNQYEFAEKLGISPQAVSKWECGQSCPSIENLCVISEILDVSIDT 85 Query: 66 ILFGDEDKQP 75 ++ + D + Sbjct: 86 LIGENSDSEK 95 >UniRef50_C2CXS6 Transcription regulator n=1 Tax=Lactobacillus brevis subsp. gravesensis ATCC 27305 RepID=C2CXS6_LACBR Length = 212 Score = 81.1 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 33/63 (52%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 ME ++I E+I+ RK TQ+ LA L +S ++S WE G P K++ LS + Sbjct: 1 MEGVPMSISEKIKQCRKQKNLTQKDLADELHLSRKTISGWENGRGYPDIKSITQLSDIFG 60 Query: 61 CSP 63 S Sbjct: 61 ISV 63 >UniRef50_B4W5L7 Helix-turn-helix domain protein n=2 Tax=Brevundimonas RepID=B4W5L7_9CAUL Length = 142 Score = 81.1 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 6/115 (5%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 + +G R++ +R +L TQ +LA+A+ +S V ++E+G + + LF +++ ++ Sbjct: 18 DRHVGRRVQEKRLDLGLTQTALARAVGVSFQQVQKYEKGANRVSASKLFEMAEFMKVDIP 77 Query: 65 WILFGDEDKQPTPPVEKPVALSPKEL------ELLELFNALPESEQDTQLAEMRA 113 + G D QP E+ + E+ L LP Q L MR Sbjct: 78 FFFQGFHDAQPGVGEEEAPGFDHEHKPTKHSVEIARLAPRLPARNQKLILDMMRE 132 >UniRef50_C6IXM6 SOS-response transcriptional repressor n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IXM6_9BACL Length = 290 Score = 81.1 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 49/119 (41%), Gaps = 7/119 (5%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M +GERI+ R T R L + ++ ++S+ E+G T +NLFA+S+ Sbjct: 1 MADLKKALGERIKKCRLEKGMTLRELGSQVGMTSSALSKVEKGSVSITSENLFAISEAFG 60 Query: 61 CSPTWILFGDE-------DKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMR 112 S W+L G E E +E E++ F L + E+ +R Sbjct: 61 VSVDWLLTGKEAQFKDEGYDTNEVRKEATPIFFDEEWEVVSQFRNLSDEEKTFVKQYLR 119 >UniRef50_C9A4E1 Predicted protein n=3 Tax=Enterococcus casseliflavus RepID=C9A4E1_ENTCA Length = 207 Score = 81.1 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 35/67 (52%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + IR RRK L TQ LAK L +S ++S WE G + P L L+++ Q S Sbjct: 1 MAFHQMIRERRKQLGMTQEELAKELNVSRSAISNWEIGRNYPDITTLIELAQMYQVSLDE 60 Query: 66 ILFGDED 72 + + D D Sbjct: 61 LFYDDID 67 >UniRef50_C0VYQ4 Possible transcriptional regulator n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VYQ4_9ACTO Length = 354 Score = 81.1 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 37/83 (44%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 ++ ++ E +++ R TQ LA L +S ++S+WE + P L + + Sbjct: 20 LKGVTMSFRENLQHLRSTRGLTQERLAVLLGVSRQAISKWESDRAYPEMDKLLTICDLFG 79 Query: 61 CSPTWILFGDEDKQPTPPVEKPV 83 C+ ++ GD +E P+ Sbjct: 80 CTLDELVTGDLRTTDADTLEDPL 102 >UniRef50_A8Z5P9 DNA-binding protein n=35 Tax=Staphylococcus RepID=A8Z5P9_STAA3 Length = 113 Score = 81.1 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 35/66 (53%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + E I+ +R+ +Q LA LK+S SVS+WE + P+ L A+S + + Sbjct: 1 MKLAEAIKEQRELKGWSQEELANILKVSRQSVSKWESAKNYPSLDILIAMSDLFGITIDH 60 Query: 66 ILFGDE 71 ++ GD Sbjct: 61 LIKGDT 66 >UniRef50_Q28NZ2 Transcriptional regulator, XRE family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28NZ2_JANSC Length = 133 Score = 81.1 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 2/102 (1%) Query: 2 ETKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQC 61 + + T G+R+ R+ +Q LAK L + ++ WE+ SEP L L+ +L Sbjct: 13 DAETTTFGDRVTGAREAAGLSQPELAKRLGVRVKTIRAWEQDQSEPRANKLGTLAGILGV 72 Query: 62 SPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESE 103 S W+L G + +P + P+ E L++L + + + Sbjct: 73 SMMWLLAGQGEGLDSPELSDPLD-GDIEKILIDL-RQMRQEQ 112 >UniRef50_B8GUZ2 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GUZ2_THISH Length = 118 Score = 81.1 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 14/132 (10%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M + TI R R R L +Q +A + V +WERG + P G+ L A + Sbjct: 1 MSRMSDTISSRFREERVRLGLSQAEVAGICGVRREIVGRWERGINAPGGEALAAF-GMHG 59 Query: 61 CSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNK 120 +IL G + P +PV L P ELEL+ L+ L E ++ A++RA Sbjct: 60 ADLHYILTGRDKDAP-----QPVMLRPDELELVLLWRDLTEEQRKGIRAQVRA------- 107 Query: 121 LFEELLKARQRT 132 L K R++T Sbjct: 108 -LAALRKGRKKT 118 >UniRef50_C7H8I0 SOS-response transcriptional repressor n=4 Tax=Ruminococcaceae RepID=C7H8I0_9FIRM Length = 209 Score = 81.1 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 1/76 (1%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 ++ E +R RK +Q LA L ++ +V +WE G S P + L+++L + + Sbjct: 1 MSFPELLRQCRKQKHMSQAELASLLGVTQQAVGKWESGKSSPDPTTVAKLAEILDTTADY 60 Query: 66 ILFGDEDKQPTPPVEK 81 +L G D E+ Sbjct: 61 LL-GLFDPTAEGQTEE 75 >UniRef50_UPI000196AC79 hypothetical protein CATMIT_01178 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196AC79 Length = 378 Score = 81.1 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 2/70 (2%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M+TK IG+ I RK TQ L L +S+ ++S+WE G+ P L LS+ L Sbjct: 1 MDTKK--IGKFISENRKRKGLTQEQLGNILGVSNKTISRWENGNYMPDLSLLIPLSETLD 58 Query: 61 CSPTWILFGD 70 S +L G Sbjct: 59 ISLNELLNGK 68 >UniRef50_B3XM16 Transcriptional regulator, XRE family n=1 Tax=Lactobacillus reuteri 100-23 RepID=B3XM16_LACRE Length = 203 Score = 81.1 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 34/65 (52%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + I+ +R NL TQ +A+ L ++ ++S WE+G S P L +S + + S Sbjct: 1 MEFRNYIKKQRNNLGFTQAEIAEKLHVTRQTISNWEQGKSYPDLDTLVKISDIYKISIDT 60 Query: 66 ILFGD 70 +L GD Sbjct: 61 LLKGD 65 >UniRef50_C2KZU8 Helix-turn-helix motif protein n=3 Tax=Firmicutes RepID=C2KZU8_9FIRM Length = 331 Score = 80.7 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 1/86 (1%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + ++I RK +Q LA+ L +S S+S+WE S P + LS+V S + Sbjct: 1 MILADKIIELRKKNGWSQEDLAEKLDVSRQSISKWEGAQSIPDMNKILKLSEVFSVSTDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELE 91 +L DE + +P V E Sbjct: 61 LLK-DEIELDSPGEAPKVDTESSLKE 85 >UniRef50_A9KHQ0 Transcriptional regulator, XRE family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KHQ0_CLOPH Length = 268 Score = 80.7 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 34/66 (51%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + +GE+I R +Q LA+ L +S S+S+WE G S P L ALS++ S Sbjct: 1 MKLGEKIVMFRTEHHLSQGDLAEKLGVSRQSISKWETGGSVPDLDKLIALSELFDVSLDN 60 Query: 66 ILFGDE 71 ++ E Sbjct: 61 LVKDQE 66 >UniRef50_C5A7V6 Putative phage repressor n=1 Tax=Burkholderia glumae BGR1 RepID=C5A7V6_BURGB Length = 241 Score = 80.7 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 35/69 (50%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + IG RIR +R T + + IS +V+ WERG + P L L+++L+ S + Sbjct: 1 MDIGSRIREKRLAHGLTLQQVGDMFGISRSAVASWERGATRPDQDKLPRLARILKTSIAF 60 Query: 66 ILFGDEDKQ 74 +L G+ Sbjct: 61 LLSGERRHD 69 >UniRef50_C7XUY0 Transcriptional regulator n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XUY0_9LACO Length = 110 Score = 80.7 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 53/115 (46%), Gaps = 7/115 (6%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 IG++I R + +Q LAKA+ S ++++WE G SEP+ + +++ S ++L Sbjct: 2 IGDKIHELRTQKRMSQTDLAKAIHASQQAITKWENGKSEPSSSVINSIANYFNVSTDYLL 61 Query: 68 FGDEDKQPTPPVEKPVALSPKELELLELFN-ALPESEQDTQLAEMRARVKNFNKL 121 +K P LS + + + + E+D + ++A K ++ Sbjct: 62 GRTSEKLPDK------DLSKNQKLIAYSIDPDTSDEERDAIIEMVQAAKKFRRRI 110 >UniRef50_B6GDK8 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GDK8_9ACTN Length = 125 Score = 80.7 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 59/120 (49%), Gaps = 3/120 (2%) Query: 12 IRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFGDE 71 I+ RK ++ +Q A+ + +S +V WERG+S P+ + ++ + VL CSP IL D+ Sbjct: 5 IQQMRKKMRISQTEFAERIGVSLRTVGSWERGESVPSAEQIWNCAVVLGCSPNEILCWDD 64 Query: 72 DKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEELLKARQR 131 ++ P + L+ +E E++ + + + + R ++ + + A ++ Sbjct: 65 ER---PHEDSGEHLTSEEREIVGCYRESTFERKKSLMQTARDSADMSKEMAKRSVSATKK 121 >UniRef50_C4F7U6 Putative uncharacterized protein n=2 Tax=Collinsella RepID=C4F7U6_9ACTN Length = 206 Score = 80.7 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 34/65 (52%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + +G I+ R L +Q LA+ + +S ++S WE G + P ++L LS V + Sbjct: 1 MELGSHIKEHRTELGLSQDDLAERIYVSRQTISNWECGRTYPDVQSLLLLSNVFGVTVDS 60 Query: 66 ILFGD 70 ++ GD Sbjct: 61 LIKGD 65 >UniRef50_A9IYN4 Transcriptional regulator n=14 Tax=Bartonella RepID=A9IYN4_BART1 Length = 157 Score = 80.7 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 4/112 (3%) Query: 1 METKNLTI----GERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALS 56 M+++NL I G++IR RR+ LK +Q +L AL +S + ++E+G + + L +S Sbjct: 37 MQSQNLNIDLLVGKKIRLRRQMLKMSQTTLGHALGVSFQQIQKYEKGLNRVSAGRLMQIS 96 Query: 57 KVLQCSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQL 108 +L ++ KQ P V S +E LL+ F L +Q L Sbjct: 97 DILNVPISFFYADIITKQQPPHHHDEVISSTEEYLLLKRFRTLTSIKQRAIL 148 >UniRef50_B6ET56 Putative peptidase, S24-like n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6ET56_ALISL Length = 205 Score = 80.7 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 25/73 (34%), Positives = 40/73 (54%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 TIGERI+ R N +Q SLA+ + ++ ++SQWE G ++P KNL ++ + ++ Sbjct: 3 TIGERIKSLRLNQGLSQESLAEKINVTKSTISQWEVGKAQPKNKNLLSIVTFFDTTYEYL 62 Query: 67 LFGDEDKQPTPPV 79 G E P V Sbjct: 63 KGGGEIDDRCPRV 75 >UniRef50_C6JFU4 Predicted protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFU4_9FIRM Length = 111 Score = 80.7 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 7/110 (6%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 K TIG+RI R NL TQ L + S ++S++E G ++P+ +NL LSKVL Sbjct: 1 MKKNTIGKRIAEARINLNITQEQLEELSGFSVSTISRFETGRTQPSIENLIKLSKVLNVG 60 Query: 63 PTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMR 112 + L+ D P + SP + + + + + E + L ++ Sbjct: 61 IDYFLY---DLIPHNETIQ----SPTVKDAVTVLSQMNERQAQYMLDIIK 103 >UniRef50_C3WDT3 Transcriptional regulator n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WDT3_FUSMR Length = 181 Score = 80.7 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 37/75 (49%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 N+ G++I+ +RK TQ L + L +S ++++WE S P K + LS + Sbjct: 18 NMNFGDKIQLQRKKKGMTQEELGEELNVSRQTITKWESNQSFPEIKKIIKLSYFFDVTID 77 Query: 65 WILFGDEDKQPTPPV 79 ++L + + + + Sbjct: 78 YLLKDEIEDEERNVI 92 >UniRef50_D2U4K8 Phage transcriptional regulator n=1 Tax=Arsenophonus nasoniae RepID=D2U4K8_9ENTR Length = 152 Score = 80.7 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 35/127 (27%), Positives = 64/127 (50%), Gaps = 11/127 (8%) Query: 14 YRRKNLKHTQRSLAKALKI-SHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI------ 66 +++ L TQ A+ L + +VSQ+ G + +K+L SP I Sbjct: 21 EKKEALSLTQEKAAEELGFNTQGAVSQYLNGKVPLNTDTIIKFAKILHVSPEAIKPELSS 80 Query: 67 ---LFGDEDKQPTPPVEKP-VALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLF 122 + D P ++P ++++ +EL LL+L N LPESEQ + ++ + + +++LF Sbjct: 81 LLKYVRETDSDSNTPTQQPEISITNRELALLKLINQLPESEQTSLHESLQEKKRYYDRLF 140 Query: 123 EELLKAR 129 EE+ KA+ Sbjct: 141 EEIAKAK 147 >UniRef50_UPI0001C364C2 helix-turn-helix domain-containing protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C364C2 Length = 260 Score = 80.7 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 31/62 (50%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + GE++ RK +Q +LA+ L + ++S+WE P + L LS + Q + Sbjct: 1 MNFGEKLFNLRKEKGLSQEALAEQLNTTRQAISKWENNHGYPETEKLLKLSDIFQVPVDF 60 Query: 66 IL 67 +L Sbjct: 61 LL 62 >UniRef50_C8WKX0 Transcriptional regulator, XRE family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WKX0_EGGLE Length = 247 Score = 80.3 bits (197), Expect = 1e-14, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 35/59 (59%) Query: 4 KNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 N+ I +R+ R+ ++Q LA+ L +S +VS+WER +S P NL AL+K+ S Sbjct: 11 MNVEIAQRLAAMRREQGYSQEELAERLGLSRQAVSKWERAESSPDTGNLIALAKLYGVS 69 >UniRef50_D2MI64 Prophage repressor n=2 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MI64_9BACT Length = 130 Score = 80.3 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 6/112 (5%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSE-PTGKNLFALSKVLQCSPTW 65 T+ ERIR R+ +Q +AKAL+IS +V+QWE+G ++ N FAL+ +L P W Sbjct: 3 TLTERIRSAREEAGLSQADVAKALRISASAVNQWEQGLTKNMKLNNFFALANLLGQDPRW 62 Query: 66 ILFGD-----EDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMR 112 + G ++ P + L+ +E LL LP + T L +R Sbjct: 63 LATGKMLSRVQEPAVISPKSEYSTLTSEEKALLHYVRRLPVKLRKTLLKFIR 114 >UniRef50_B9YYS9 Putative phage repressor n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YYS9_9NEIS Length = 324 Score = 80.3 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 1/95 (1%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 T+G+R+ + R+ TQ LAK + +S +++ E G ++ K+L A++K L S TW+ Sbjct: 96 TLGKRVTHARELKGLTQLELAKRVGVSAQTINFVENGRNK-GTKHLLAIAKALGVSATWL 154 Query: 67 LFGDEDKQPTPPVEKPVALSPKELELLELFNALPE 101 G V ++L + LPE Sbjct: 155 DSGKGSMTEVSLRPIEVWEDEEQLAQSGEYIFLPE 189 >UniRef50_A8UD60 DNA-binding protein n=2 Tax=Carnobacterium sp. AT7 RepID=A8UD60_9LACT Length = 170 Score = 80.3 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 2/106 (1%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + +GER++ R N ++Q +A L IS S+S+WE G+S P NL LS + S Sbjct: 1 MALGERLKASRVNKGYSQGDVADYLHISRQSISKWENGNSYPDLDNLVKLSTYYEVSIDE 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEM 111 +L E+++ +E+ + ++ L+ + ++ L + Sbjct: 61 LL--KENQELKRKIEENEVKIEENVQKLDFIRGNTDKDEGLILLIL 104 >UniRef50_B1C3C9 Putative uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3C9_9FIRM Length = 335 Score = 80.3 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 52/111 (46%), Gaps = 2/111 (1%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 +E N+ + ++I RK +Q LA+ L ++ S+S+WE S P + + LS++ Sbjct: 10 LEVMNVILADKIIELRKKNGWSQEQLAQKLNVTRQSISKWEGEQSVPDLQKIILLSEIFG 69 Query: 61 CSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEM 111 + +++ ++ + + + V L +++ L E L +L + Sbjct: 70 VTTDYLI--KDEIEEEEFLNEDVDLKVRKVTLTEAKEFLNIKHTSAKLMSL 118 >UniRef50_Q70CB1 Putative transcriptional regulator n=2 Tax=Streptococcus thermophilus RepID=Q70CB1_STRTR Length = 113 Score = 80.3 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 8/119 (6%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + ER++ RK TQ +A+ L IS + + WERG +PT NL ++++L S + Sbjct: 1 MEFSERLKELRKKANFTQVEVAEKLGISQPAYASWERGVKKPTQDNLVRIAQILNVSVDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEE 124 ++ E+K L EL L + E+D E+ ++ K F++ Sbjct: 61 LVGNSEEKAD--------ELDNIELLFRMNSKGLTDEEKDIFRKELIEFMEERKKAFDK 111 >UniRef50_B8FWP9 Transcriptional regulator, XRE family n=2 Tax=Desulfitobacterium hafniense RepID=B8FWP9_DESHD Length = 140 Score = 80.3 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 8/109 (7%) Query: 2 ETKNLTIGERIRYRRKNLKHTQRSLAKAL-KISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 E+ +G RI+ RKN K + L++ L IS ++ + E G+ P+ ++ +S Sbjct: 4 ESFKKALGTRIKQLRKNGKLSLADLSRHLPSISRANLGRIENGEVMPSAIFIYEISSFFN 63 Query: 61 CSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLA 109 S W+L G+ P + L+ + L+E+FN + EQ +A Sbjct: 64 VSADWLLTGNTPALP-------IYLNAEHERLIEMFNLMNGMEQQILMA 105 >UniRef50_D1P3I7 Toxin-antitoxin system, antitoxin component, Xre family n=2 Tax=Providencia RepID=D1P3I7_9ENTR Length = 106 Score = 80.3 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 42/84 (50%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 IG +I+ RRK L + LAK L IS +S++E G ++ +L +++ L+C W Sbjct: 7 IGIKIKARRKELGLSGAGLAKILNISQQQISRYENGINKIPLNHLVSIAVALKCPIDWFF 66 Query: 68 FGDEDKQPTPPVEKPVALSPKELE 91 G + + + + +EL+ Sbjct: 67 QGCISDEDYSIQDSNMGIKNQELK 90 >UniRef50_C2KY20 Putative uncharacterized protein n=1 Tax=Oribacterium sinus F0268 RepID=C2KY20_9FIRM Length = 300 Score = 80.3 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 37/69 (53%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 + IG+ I +RKNL TQ+ LA+ + +S SVS+WERG P F L +L S Sbjct: 1 MDLVKIGKYISEKRKNLGMTQKQLAEKIGMSDKSVSKWERGICLPDVSLYFDLCSILGIS 60 Query: 63 PTWILFGDE 71 L G++ Sbjct: 61 INEFLAGED 69 >UniRef50_Q88UM2 Prophage Lp2 protein 9 n=1 Tax=Lactobacillus plantarum RepID=Q88UM2_LACPL Length = 120 Score = 80.3 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 3/109 (2%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +TIG+RI RK TQ LA A+ +S +++ WE + +L LS + + Sbjct: 1 MTIGKRIANLRKQKSLTQPMLADAMNVSQSTIASWESDRRSVSNDDLIKLSDYFGVTTDY 60 Query: 66 ILFGDEDKQPTPPVEK---PVALSPKELELLELFNALPESEQDTQLAEM 111 +L + + + L E + L E E+ M Sbjct: 61 LLGKNGTPKWANEKDTKDLQDFLDANEGSMTYGGEDLTEEEKQQVRVAM 109 >UniRef50_A8RWL6 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RWL6_9CLOT Length = 185 Score = 80.3 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 39/62 (62%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +T GE++++ RK +Q L++ L +S ++S+WE G+S P +N+ LSK+ S + Sbjct: 1 MTFGEKLKFLRKQKGFSQERLSQQLTVSRQAISKWELGESLPDTENVIQLSKLFSVSIDF 60 Query: 66 IL 67 +L Sbjct: 61 LL 62 >UniRef50_A8RQA3 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RQA3_9CLOT Length = 199 Score = 80.3 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 47/88 (53%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + E I+ RR +K +Q +A L IS +V++WE G SEPT KNL L+ + + S + Sbjct: 1 MALSENIKARRTQIKMSQEYVADQLGISRQAVAKWEAGTSEPTSKNLSELASLFEMSISE 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELL 93 ++ + E+ ++ + ++L Sbjct: 61 LVDPQTYAEEQETQEQKLSTKQRNAKML 88 >UniRef50_A5KM56 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KM56_9FIRM Length = 429 Score = 80.3 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 3/105 (2%) Query: 9 GERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILF 68 GE I +RK TQ+ +A+ L +++ +VS+WE P L L K L + IL Sbjct: 48 GEFIARKRKERGMTQKEMAELLGVTNKAVSKWETSQGMPDIGILPELGKALGVTVDEILM 107 Query: 69 GDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRA 113 G++ +Q A+S ++ +LLE+ E + +T + Sbjct: 108 GEQIEQEKRAE---TAVSDEDKKLLEIVLERAERKAETIRITWKD 149 >UniRef50_A4VWF1 Putative uncharacterized protein n=8 Tax=Lactobacillales RepID=A4VWF1_STRSY Length = 178 Score = 79.9 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 32/71 (45%) Query: 4 KNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSP 63 K + G++I+ RK TQ A L ++ +VS WE + P + L +S V S Sbjct: 19 KEMNFGQQIKDLRKKKGLTQEQFALKLNVTRQAVSNWENDKNLPDLELLILMSSVFSISL 78 Query: 64 TWILFGDEDKQ 74 ++ G D Sbjct: 79 DQLILGGTDMN 89 >UniRef50_A8SS10 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SS10_9FIRM Length = 159 Score = 79.9 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 2/90 (2%) Query: 4 KNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSP 63 + +T GER+ R +Q LA+ L +S S+S+WE + P L +S S Sbjct: 12 EGMTFGERLYELRNKNNLSQEELAEVLDVSRQSISKWENDKAYPEMTRLLFMSDYFDVSL 71 Query: 64 TWILFG--DEDKQPTPPVEKPVALSPKELE 91 +++ G E+ + + +S + + Sbjct: 72 DYLMRGIKKENNEEKVTADDADKISNDKYK 101 >UniRef50_D1NZ39 Toxin-antitoxin system, antitoxin component, Xre family n=3 Tax=Providencia RepID=D1NZ39_9ENTR Length = 103 Score = 79.9 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 2/91 (2%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M+ ++ IG RI+ RRK L + +LA L +S +S++E G ++ +L ++ +L Sbjct: 1 MDIHSI-IGTRIKNRRKELGLSGANLASKLNLSQQQISRYENGINKIPIDHLLDIADILM 59 Query: 61 CSPTWILFGDEDKQPTPPVEKPVALSPKELE 91 C W G + + P ++ KEL+ Sbjct: 60 CPIEWFFKGY-KNEDNDNEQVPFDITNKELQ 89 >UniRef50_C0BEF9 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0BEF9_9FIRM Length = 319 Score = 79.9 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 2/94 (2%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M+TK IGE ++ RK TQ LA+ L +S ++S+WE G + P L +++ Sbjct: 1 MDTKK--IGEFLKVLRKERGLTQEQLAEILLVSGRTISRWETGTNMPDLSILIKMAEFYN 58 Query: 61 CSPTWILFGDEDKQPTPPVEKPVALSPKELELLE 94 IL G+ + K + LE Sbjct: 59 VEVKEILDGERKSESMDKELKETLSKVADYNKLE 92 >UniRef50_B7I085 Helix-turn-helix domain protein n=48 Tax=Bacillaceae RepID=B7I085_BACC7 Length = 262 Score = 79.9 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 2/83 (2%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + GE++ RK +Q +LA+ L + +VS+WE G P + L + V + S + Sbjct: 1 MGFGEKLFKLRKEKGLSQEALAEKLNTTRQAVSKWENGQGFPETEKLIMIGNVFEVSLDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPK 88 +L E+ + + E +S + Sbjct: 61 LL--KENAEQSNEKENGYYVSKE 81 >UniRef50_A7ILE3 Transcriptional regulator, XRE family n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7ILE3_XANP2 Length = 130 Score = 79.9 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 49/109 (44%), Gaps = 4/109 (3%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 ++ IG R++ R +Q +L + L I+ + ++E G + L ++ L+ S Sbjct: 12 DVVIGFRVKQSRLRSGVSQEALGEHLGITFQQIQKYENGKNRIACSTLVMIADFLKVSAL 71 Query: 65 WILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRA 113 ++L G E P + A +E ++L + LP + + +RA Sbjct: 72 FLLRGTEKDAGALPQARDTA----SVEAVDLLSQLPPHSKAAAINTIRA 116 >UniRef50_A6NZM6 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NZM6_9BACE Length = 296 Score = 79.9 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 43/90 (47%), Gaps = 4/90 (4%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M+ + I++ RK +Q +A L + +VS+WE G S P L ++++L Sbjct: 1 MDMIDKN----IKHFRKAKGMSQEEMAVKLNVVRQTVSKWENGLSVPDADVLIRMAELLN 56 Query: 61 CSPTWILFGDEDKQPTPPVEKPVALSPKEL 90 S + +L + + + + + ++ ++L Sbjct: 57 VSVSQLLGIEAEDKSDKDLSEKLSKLNEQL 86 >UniRef50_Q5FSV4 Transcriptional regulator n=1 Tax=Gluconobacter oxydans RepID=Q5FSV4_GLUOX Length = 212 Score = 79.9 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 40/78 (51%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 ++ +G RIR RR + +Q L +AL ++ + ++ERG + L+ L++VL Sbjct: 37 DVHVGNRIRLRRTLMGLSQEKLGEALGLTFQQIQKYERGANRVGASRLYDLAQVLDVPIG 96 Query: 65 WILFGDEDKQPTPPVEKP 82 + ++ +P+ P P Sbjct: 97 FFFDDMQEARPSAPSSAP 114 >UniRef50_Q2RLS7 Transcriptional regulator, XRE family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RLS7_MOOTA Length = 128 Score = 79.9 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 57/130 (43%), Gaps = 5/130 (3%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 ++IG+RI+ R+ + TQ LA+ ++IS +++ +E G EP G+ L +K L S + Sbjct: 1 MSIGKRIKELREKIGLTQEELAERVQISRSALANYESGYREPKGEILVRFAKALNTSTDF 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEEL 125 +L + T K L L L N PE + ++ +L + Sbjct: 61 LLGNEVKVDKTNDKTKKYELDEATLLFARLSNLTPEGREKVLRE-----LEWIEELERKR 115 Query: 126 LKARQRTNKR 135 R++ + Sbjct: 116 FLERKKKQNQ 125 >UniRef50_A4EAV3 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAV3_9ACTN Length = 127 Score = 79.9 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 4/106 (3%) Query: 11 RIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFGD 70 +++ RK ++Q LA AL + +V WERG + P + L+ +K+L P +L Sbjct: 4 KLKQARKENGYSQADLADALNVDIKTVGNWERGKTLPDIEQLWKCAKILHTDPNDLLGWY 63 Query: 71 EDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVK 116 E+ P ++P + E EL+ + E + L R + + Sbjct: 64 EEH----PEDRPTVPAGAEGELIACYRQSTEKRRSKILETARDQAE 105 >UniRef50_Q6UAU6 Gp36 n=2 Tax=Siphoviridae RepID=Q6UAU6_9CAUD Length = 202 Score = 79.9 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 31/88 (35%), Positives = 44/88 (50%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M + T GER++ RR LK T + +A+++ IS V ERGD P+ + AL+K L+ Sbjct: 1 MINRMKTRGERLKARRLELKMTLKQVAESVGISLPGVQNLERGDVMPSLEIGLALAKCLR 60 Query: 61 CSPTWILFGDEDKQPTPPVEKPVALSPK 88 WIL+G E PV P Sbjct: 61 MPVQWILYGTESDPDRVPVIGTTESGPD 88 >UniRef50_C7XXQ9 Transcriptional regulator n=2 Tax=Lactobacillus RepID=C7XXQ9_9LACO Length = 211 Score = 79.9 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 35/70 (50%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + +I+ RRK TQ +AK L ++ ++S WE+G S P L +S Q S Sbjct: 1 MKFSTQIKMRRKKRGLTQSVVAKKLYVTRQTISNWEQGKSYPDLNTLVRISDFYQISIDS 60 Query: 66 ILFGDEDKQP 75 +L D+D Q Sbjct: 61 LLREDQDLQE 70 >UniRef50_A3CPI8 Transcriptional regulator, XRE family, putative n=1 Tax=Streptococcus sanguinis SK36 RepID=A3CPI8_STRSV Length = 197 Score = 79.9 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 40/65 (61%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + +G++I++ RK +Q LA+ + +S S+S WERG + P +NL LSKV + S Sbjct: 1 MQVGKQIQHYRKEKNLSQDDLAEIIFVSRQSISNWERGATYPDIQNLLLLSKVFEVSLDK 60 Query: 66 ILFGD 70 ++ GD Sbjct: 61 LVKGD 65 >UniRef50_C6L9K9 DNA-binding protein n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L9K9_9FIRM Length = 257 Score = 79.9 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 1/106 (0%) Query: 2 ETKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQC 61 ET G + +RK K TQ+ LA+ L +S +VS+WERG S P L L++ L Sbjct: 3 ETGKEQFGRFVAQQRKKKKLTQKELAQKLYVSDKAVSKWERGSSMPDIALLTPLAEALGV 62 Query: 62 SPTWILFGDE-DKQPTPPVEKPVALSPKELELLELFNALPESEQDT 106 + T +L G E +K + L + + + PE +D Sbjct: 63 TVTELLEGKEMEKTEESRMADDSHLEMLLKKAVTITEDTPEMRRDK 108 >UniRef50_B6IN19 DNA-binding protein, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6IN19_RHOCS Length = 232 Score = 79.6 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 8/126 (6%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 + RIR RR L +Q LA+ L I+ V ++ERG + + L+ L+++L Sbjct: 16 VIESHVASRIRLRRGLLGMSQSDLARTLGITFQQVQKYERGSNRVSVGKLYRLAEILDVP 75 Query: 63 PTWILFGDEDKQPTPP--------VEKPVALSPKELELLELFNALPESEQDTQLAEMRAR 114 T+ G + P ++ LS +EL+LL + P D + +RA Sbjct: 76 LTFFFDGLDLPDLKKPPQTTTGFAEQQSPILSRRELDLLRAWKNSPPEVSDAVASLLRAI 135 Query: 115 VKNFNK 120 ++ Sbjct: 136 APYVDE 141 >UniRef50_C4F7R9 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F7R9_9ACTN Length = 276 Score = 79.6 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 38/67 (56%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + E+I+ RK L +Q LA A+ +S +VS WERGD+ P ++L + + S Sbjct: 1 MILSEQIKLGRKELGMSQADLADAIWVSRNTVSNWERGDTTPDIQSLVLMGALFGLSLDE 60 Query: 66 ILFGDED 72 ++ GDE Sbjct: 61 MVKGDEQ 67 >UniRef50_B6GAN7 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GAN7_9ACTN Length = 222 Score = 79.6 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 6/114 (5%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + I + I+ RK TQ LA+ L ++ +++QWE G S P + L+ V + Sbjct: 11 MGISQNIKRLRKQAGMTQVELAEKLDVARSTITQWETGWSSPRMGMVQKLAGVFGVTSAD 70 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFN----ALPESEQDTQLAEMRARV 115 +L ED + P PVA S + LL + AL + E+ + E+ + V Sbjct: 71 MLA--EDSEGLPSGAMPVAASSATVPLLAIGRVHAGALTDEEEVSHRVEVPSSV 122 >UniRef50_C4ZER3 Putative uncharacterized protein n=4 Tax=Firmicutes RepID=C4ZER3_EUBR3 Length = 123 Score = 79.6 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 39/69 (56%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 ++GE ++ R K TQ +A+ + +S +VS+WE G S+P+ NLFAL+K+ S Sbjct: 55 VVRKSLGEALKVHRTQCKMTQEFVAETIGVSRQAVSKWENGTSDPSTSNLFALAKLYGIS 114 Query: 63 PTWILFGDE 71 +L E Sbjct: 115 VEELLKEVE 123 >UniRef50_A4VYH7 Predicted transcriptional regulator n=8 Tax=Streptococcus RepID=A4VYH7_STRS2 Length = 121 Score = 79.6 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 39/80 (48%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 + ++IR R +Q LA+ L IS +VS+WE G++ P L L+++ S Sbjct: 1 MIMKQLAQQIRVLRTAKNLSQDELAEKLYISRQAVSKWENGEATPDIDKLVQLAEIFGVS 60 Query: 63 PTWILFGDEDKQPTPPVEKP 82 +++ G E ++ ++ Sbjct: 61 LDYLVLGKEPEKEIVVEQRG 80 >UniRef50_C9L3X9 Toxin-antitoxin system, antitoxin component, Xre family n=2 Tax=Clostridiales RepID=C9L3X9_RUMHA Length = 215 Score = 79.6 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 34/79 (43%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + IGE+I RK +Q A +S +VS WE G S P + + +S + S Sbjct: 1 MNIGEQINNLRKKHGLSQDDFANLFNVSRQTVSNWENGKSYPDLEMIIKISDYFKISVDE 60 Query: 66 ILFGDEDKQPTPPVEKPVA 84 +L D + EK V Sbjct: 61 LLRNDVQSEEKIDNEKKVK 79 >UniRef50_Q3ABG7 Putative prophage LambdaCh01, repressor protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ABG7_CARHZ Length = 254 Score = 79.6 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 33/80 (41%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + G+R+R R TQ LAK L I ++S +E +P L LS S + Sbjct: 1 MNFGQRLRQLRTERDLTQAELAKLLSIGESTISFYESNKRQPDFDTLIKLSNFFNVSIDF 60 Query: 66 ILFGDEDKQPTPPVEKPVAL 85 +L ++ K + L Sbjct: 61 LLGRTDESNKFIQNTKTIPL 80 >UniRef50_C0Z6E6 Putative DNA-binding protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6E6_BREBN Length = 203 Score = 79.6 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 26/142 (18%), Positives = 53/142 (37%), Gaps = 20/142 (14%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 L + +R+R RK TQ LA+ + + ++S +E S P L L+ VL + W Sbjct: 55 LMLSQRLRTARKTKGLTQEELAEHVCTTKGTISNYENNHSTPPNDMLRQLADVLDVTTDW 114 Query: 66 IL-------------FGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMR 112 +L G+ + + + + P + L+ + E E+ Sbjct: 115 LLGRTDEVTAYILPATGETNHRSLDELLQEKIDDPDDYYFLDGYLDASEEEKKEI----- 169 Query: 113 ARVKNFNKLFEELLKARQRTNK 134 + + L ++ + R + Sbjct: 170 --RRYWYDLKKQWKVRKVREER 189 >UniRef50_C0ZFK5 Putative DNA-binding protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZFK5_BREBN Length = 120 Score = 79.6 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 1/106 (0%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 T+G+RIR RK TQ A + +S VS WER + P+ +++ ++++ +I Sbjct: 6 TVGQRIRKLRKANNWTQEQFANRVNVSPQKVSNWERDYTSPSVEDIARIAQICNTESDYI 65 Query: 67 LFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMR 112 L G T + LS E + L E ++ L +R Sbjct: 66 LTGRTSPL-TSSAKSDKHLSEFENLFFFELDKLSEEDKKKALEHVR 110 >UniRef50_C9A6X0 Putative uncharacterized protein n=3 Tax=Enterococcus casseliflavus RepID=C9A6X0_ENTCA Length = 204 Score = 79.6 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 6/90 (6%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +TI E+I+ R L TQ+ +++ L ++ ++S WE S P L LS + Q Sbjct: 1 MTIAEKIKESRLKLGLTQQEVSEKLFVTRQTISNWENNRSTPDIDTLIKLSDLYQIDLES 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLEL 95 +L +P E+P S ++ L Sbjct: 61 LL------KPEQLAEEPEIKSDEKKPTFRL 84 >UniRef50_C9RC67 Transcriptional regulator, XRE family n=1 Tax=Ammonifex degensii KC4 RepID=C9RC67_AMMDK Length = 151 Score = 79.6 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 37/71 (52%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 +G RI++ R TQ LA+ L + ++ ++ERG + P + L L+ +L+ S +++ Sbjct: 9 LGLRIKFARLRKGLTQAELAQKLNVHPETLGKYERGTNRPDAETLRKLADILEVSTDFLV 68 Query: 68 FGDEDKQPTPP 78 D P P Sbjct: 69 GRTNDPSPIPS 79 >UniRef50_UPI0001C35F8B hypothetical protein ChatD1_28899 n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35F8B Length = 200 Score = 79.6 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 44/88 (50%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +++GE I+ +R LK +Q +A+ L +S +VS+WE S+P KNL L+ V + Sbjct: 1 MSLGENIKTKRNELKLSQEYVAEQLGVSRQAVSKWETDQSQPKAKNLTELATVFHVGLSG 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELL 93 ++ + + E + ++L Sbjct: 61 LVEPQKYQAEQAAQENEWRENRNNSKML 88 >UniRef50_C3DY68 Helix-turn-helix domain protein n=1 Tax=Bacillus thuringiensis serovar pakistani str. T13001 RepID=C3DY68_BACTU Length = 117 Score = 79.2 bits (194), Expect = 3e-14, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 57/112 (50%), Gaps = 2/112 (1%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +T+GER+R R+ +TQ + + L+I ++S +E G +P L L+ + + S + Sbjct: 1 MTLGERLRTCREKSGYTQTYITEKLEIHRGTLSSYESGRRKPDYDTLSKLADIYKVSVDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKN 117 +L DK+ T +K + +++E EL + L + EQ ++ V+ Sbjct: 61 LLGRSTDKRLTAEQDKQATVMGRKIE--ELISNLSKEEQRKAWEQLEMYVQY 110 >UniRef50_A2UZN6 Transcriptional regulator, XRE family n=1 Tax=Shewanella putrefaciens 200 RepID=A2UZN6_SHEPU Length = 182 Score = 79.2 bits (194), Expect = 3e-14, Method: Composition-based stats. Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 4/139 (2%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 ME N++IG ++ RR L Q +A+ L ++ +VS+WER +EP + LSK+L+ Sbjct: 1 MENLNMSIGSVLKDRRIALNIKQEDIAEQLGLTVQTVSKWERDLTEPKASQVTQLSKILK 60 Query: 61 CSPTWILFGDEDKQPTPPVE--KPVALSPKELELLELFNALPESEQDTQ-LAEMRARVKN 117 + I G+ P+E + V + E+ EL + E DT+ +M ARV + Sbjct: 61 IAEKDICSGEIKHLKMDPLEFVRRVGILMNEVPQTELLIGMHEYINDTEGFIDMLARVSS 120 Query: 118 FN-KLFEELLKARQRTNKR 135 + +L E + + N++ Sbjct: 121 YPYELLEMEYEHSKTENEK 139 >UniRef50_Q161J2 Helix-turn-helix domain protein, putative n=19 Tax=Bacteria RepID=Q161J2_ROSDO Length = 135 Score = 79.2 bits (194), Expect = 3e-14, Method: Composition-based stats. Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 10/119 (8%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 T G+R+ R+ + TQ LA+ L + ++ WE SEP L ++ +L S W+ Sbjct: 14 TFGDRLAAARETSEMTQAELARRLGVRVATLRSWENDLSEPRANRLSMMAGLLNVSMMWL 73 Query: 67 LFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEEL 125 + G + P E+ + S E + N + E D M ARV+ +L ++L Sbjct: 74 INGQGEGLDAPMEERALPASASE-----VLNEMRELRTD-----MIARVEQMGRLEKKL 122 >UniRef50_A7VTE0 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VTE0_9CLOT Length = 222 Score = 79.2 bits (194), Expect = 3e-14, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 49/122 (40%), Gaps = 13/122 (10%) Query: 11 RIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFGD 70 R++ R+N +Q A+ + IS +V WE G EP K + ++ S ++L + Sbjct: 20 RLKELRENAGLSQYGFAEKIGISQSTVGNWEAGSREPNFKTMERIADFFGVSVDYLLGRE 79 Query: 71 ----EDKQPTPPVEK--------PVALSPKELELLELFNAL-PESEQDTQLAEMRARVKN 117 +P+ P K P + +E + + + P+ + ++ + ++ Sbjct: 80 TVAGGPPEPSVPGSKWIPVIGTIPAGTPVEAIEDILDYEEITPQMASQGEHFALKIKGQS 139 Query: 118 FN 119 Sbjct: 140 ME 141 >UniRef50_B4X5D8 Helix-turn-helix domain protein n=2 Tax=Alcanivorax sp. DG881 RepID=B4X5D8_9GAMM Length = 119 Score = 79.2 bits (194), Expect = 3e-14, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 44/108 (40%), Gaps = 2/108 (1%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 ++ ER++ R L TQ L L ++ ++S WE G P + L L VL S Sbjct: 11 MSFPERLKAARLALGLTQEQLGDELHVTKSTISAWENGRDSPGFRLLPKLKAVLGVSLDH 70 Query: 66 ILFGD--EDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEM 111 ++ GD E + E +LL+ + L + LA + Sbjct: 71 LICGDPVEGASELNSKYDAQVRNDAEAQLLKGYRRLSVKRRQGLLAMI 118 >UniRef50_A3CR12 Transcriptional regulator, XRE family, putative n=5 Tax=Lactobacillales RepID=A3CR12_STRSV Length = 168 Score = 79.2 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 39/74 (52%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + ++ RK +Q LA+ + +S S+S+WE G + P + + LSK+ Q + + Sbjct: 1 MKLANKLFELRKEKGWSQEKLAEQINVSRQSISKWESGQALPELEKVVELSKIFQVTTDY 60 Query: 66 ILFGDEDKQPTPPV 79 +L D DK PV Sbjct: 61 LLLEDSDKPEIKPV 74 >UniRef50_A7DV91 DNA-binding protein RDGA n=1 Tax=Vibrio vulnificus RepID=A7DV91_VIBVU Length = 208 Score = 79.2 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 1/70 (1%) Query: 6 LTIGERIRYRRKN-LKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 +++G RI+ R+ L +++ L L +S +V+QWE G + P+ K L LS+VL+ + Sbjct: 1 MSLGGRIKKLREESLHISKKELGAILGVSQSAVNQWENGVNYPSQKRLIELSRVLKTTYE 60 Query: 65 WILFGDEDKQ 74 W++ G Sbjct: 61 WLVNGTTSSH 70 >UniRef50_C7JC38 Transcriptional regulator n=8 Tax=Acetobacter pasteurianus RepID=C7JC38_ACEP3 Length = 164 Score = 79.2 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 26/141 (18%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 + +G+RIR RR L +Q L +AL I+ + ++ERG + L+ ++ VL Sbjct: 22 AIDAHVGKRIRLRRTLLGLSQEKLGEALGITFQQIQKYERGANRVGASRLYHIACVLDVP 81 Query: 63 PTWIL----------------------FGDEDKQPTPPV----EKPVALSPKELELLELF 96 ++ FG + TP K V + + LEL+ + Sbjct: 82 ISFFFDDMHPVGAVSNKHAQFSETRKSFGTTSDKNTPAAPTTDTKSVFKTQETLELVRAY 141 Query: 97 NALPESEQDTQLAEMRARVKN 117 ++P+++ ++ E+ + N Sbjct: 142 YSIPDTQMRRKILELMLTMSN 162 >UniRef50_A9KQE6 Transcriptional regulator, XRE family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KQE6_CLOPH Length = 273 Score = 79.2 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 38/86 (44%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + +++ R+ +Q LA L +S SVS+WE + P L LS++ + S + Sbjct: 1 MKFCDKLIELRRERGLSQEQLADQLDVSRQSVSKWESDQTMPELSKLITLSEIFEVSLDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELE 91 ++ + +K + K++ Sbjct: 61 LMRDYIMDRSGTREKKDNTVDDKDIP 86 >UniRef50_Q3ERK0 Transcriptional regulator, MerR family n=2 Tax=Bacillus thuringiensis RepID=Q3ERK0_BACTI Length = 114 Score = 79.2 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 54/115 (46%), Gaps = 5/115 (4%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +T+G+RI++ R +Q+ LA L ++ ++S +E P+ +N + ++ L S + Sbjct: 2 VTLGDRIKFIRTKKNISQQELADILNVNRSAISLYETNRKSPSRENTYKIATALGVSIDY 61 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNK 120 +L D P + + + +L++ + +P + T + + +K K Sbjct: 62 LLGLQTD-----PSFQTDNIHSETAQLMKRLDNMPSETKQTIINLIDDLLKIHEK 111 >UniRef50_D0DT23 Transcriptional regulator n=1 Tax=Lactobacillus fermentum 28-3-CHN RepID=D0DT23_LACFE Length = 322 Score = 79.2 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 32/65 (49%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + ++I RK +Q A+ + +S S+S+WE G S P + +S++ S Sbjct: 1 MILADKITNLRKKEGWSQEEFAERMGVSRQSISKWEGGRSTPDMNKILQMSELFGVSTDV 60 Query: 66 ILFGD 70 +L D Sbjct: 61 LLKDD 65 >UniRef50_C5QAP5 Transcriptional regulator n=3 Tax=Staphylococcus RepID=C5QAP5_STAEP Length = 108 Score = 79.2 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 38/65 (58%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 I ++I+ RK +TQ LA+ L S ++S+WE+G SEP L LS++ S +++ Sbjct: 2 ISKQIKDLRKQHNYTQEELAEKLNTSRQTISKWEQGISEPDLIMLMQLSQLFSVSTDYLI 61 Query: 68 FGDED 72 G ++ Sbjct: 62 TGSDN 66 >UniRef50_P96631 HTH-type transcriptional regulator immR n=1 Tax=Bacillus subtilis RepID=IMMR_BACSU Length = 127 Score = 79.2 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 33/126 (26%), Positives = 64/126 (50%), Gaps = 3/126 (2%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +++G+R++ R+ +TQ+ A+ L I + ++S +ER +P L LS + S + Sbjct: 1 MSLGKRLKEARQKAGYTQKEAAEKLNIGNNNLSNYERDYRDPDTDTLLKLSNLYNVSTDY 60 Query: 66 ILFGDE--DKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEM-RARVKNFNKLF 122 +L DE K T + K + + +EL+ + + + E D + A + + +KN K Sbjct: 61 LLGKDEVSKKNETDLLNKTINEAIQELKDEDTLLFMNDGEFDEETARLVKKALKNGIKFI 120 Query: 123 EELLKA 128 +EL K Sbjct: 121 DELKKK 126 >UniRef50_B9WVI7 Transcriptional regulator, XRE family n=1 Tax=Streptococcus suis 89/1591 RepID=B9WVI7_STRSU Length = 126 Score = 79.2 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 4/122 (3%) Query: 2 ETKNLTIGERIRYRRKNLKHTQRSLAKALKI-SHVSVSQWERGDSEPTGKNLFALSKVLQ 60 + K +G+RIR R+ Q +A L S ++S+WE G + PTGK L L+++L Sbjct: 5 KIKYPEVGQRIRELREMRGFEQLDIANQLGYKSQSTISKWESGVNLPTGKKLILLAEMLD 64 Query: 61 CSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAE--MRARVKNF 118 S +IL G T + E + ++ +P +++D L + R+KN Sbjct: 65 TSTDYILHGKISDTSTKDTTPTIDFKEMAAESMS-YDGMPLNDEDIDLIASILETRMKNR 123 Query: 119 NK 120 +K Sbjct: 124 DK 125 >UniRef50_C5N0R4 Cro/CI family transcriptional regulator n=24 Tax=Staphylococcus RepID=C5N0R4_STAA3 Length = 189 Score = 78.8 bits (193), Expect = 5e-14, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 38/80 (47%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + ++I+ R+ ++Q LA+ L +S S+S WE S P NL + ++ + Sbjct: 1 MNLSKQIKKYRERDGYSQEYLAEKLYVSRQSISNWENDKSLPDIHNLLMMCELFNVTLDD 60 Query: 66 ILFGDEDKQPTPPVEKPVAL 85 ++ G P ++ + L Sbjct: 61 LVKGTIPFVPDIKAQRSLNL 80 >UniRef50_C9BLS2 Helix-turn-helix domain-containing protein n=6 Tax=Enterococcus faecium RepID=C9BLS2_ENTFC Length = 270 Score = 78.8 bits (193), Expect = 5e-14, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 24/142 (16%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALK-ISHVSVSQWERGDSEPTGKNLFALSKVL 59 ME +G RIR R+ LK + K + + +V+ WERG + P + L ++++ Sbjct: 1 MEIDKQAVGNRIRQIRQELKLSMEKFGKLIGDLPRSTVNNWERGINLPKTETLHQIAEIG 60 Query: 60 QCSPTWILFGDEDKQPT------------PPVEKPVA--------LSPKEL-ELLELF-- 96 + ++L+GD++ Q P +E + +S KE+ ++E F Sbjct: 61 HVTNEYLLYGDQENQYILEMLQKKAGKLDPKIEGLIVDEIKHADLVSEKEMDRMIEFFIT 120 Query: 97 NALPESEQDTQLAEMRARVKNF 118 N +P +EQD + K Sbjct: 121 NLIPPTEQDQFTFQCIDEKKQL 142 >UniRef50_C2Q4Y2 Putative uncharacterized protein n=1 Tax=Bacillus cereus AH621 RepID=C2Q4Y2_BACCE Length = 163 Score = 78.8 bits (193), Expect = 5e-14, Method: Composition-based stats. Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 4/129 (3%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M G+RI+ R TQ+ LAK + ++ VS WER + P ++L +SK+ Q Sbjct: 1 MTNNPSGYGKRIKELRNIKNWTQKELAKNIDVTSQVVSNWEREYTSPNHEDLLKMSKLFQ 60 Query: 61 CSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNK 120 + +IL G+ + + +L+ L N E + + N ++ Sbjct: 61 VTTDYILLGNNNIKKINLNYDFESLNETFGNTLAFKNK----EINLINKLLEYIENNGDE 116 Query: 121 LFEELLKAR 129 L ++L ++ Sbjct: 117 LLNKILDSK 125 >UniRef50_B9QVC7 Bacteriophage CI repressor protein, putative n=2 Tax=Labrenzia RepID=B9QVC7_9RHOB Length = 147 Score = 78.8 bits (193), Expect = 5e-14, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 35/82 (42%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 + + T+GERI R + LA+ L I ++ WE SEP L L+ +L S Sbjct: 36 SSDYTLGERICKARDIAGLSTAQLARRLGIKTSTLQSWESDRSEPRSNKLILLAGILNVS 95 Query: 63 PTWILFGDEDKQPTPPVEKPVA 84 PTW+L G + Sbjct: 96 PTWLLVGRGSPPVAEDTSADLD 117 >UniRef50_A9KQH8 Transcriptional regulator, XRE family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KQH8_CLOPH Length = 163 Score = 78.8 bits (193), Expect = 5e-14, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 2/70 (2%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M+T+ IG+ I RRK TQ+ LA L +++ ++S+WE G P L L+++L Sbjct: 1 MDTEK--IGKFIADRRKVRGLTQQQLADDLGLTNKAISKWETGQGMPDITTLPILAEMLG 58 Query: 61 CSPTWILFGD 70 + +L G+ Sbjct: 59 ITVNELLKGE 68 >UniRef50_C0FPE4 Putative uncharacterized protein n=2 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FPE4_9FIRM Length = 123 Score = 78.8 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 56/121 (46%), Gaps = 2/121 (1%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + I ERI Y + +Q L++ I+ ++S W++ + P L ++ L +P Sbjct: 1 MIISERIFYIMEQKNMSQLELSRRTGIATSNISDWKKKKTNPKADCLLSICDALDITPEQ 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRA--RVKNFNKLFE 123 +L G + ++ ++++L+ ++L + + LA M+A +++ + E Sbjct: 61 LLTGKGIDPEYKDTDMDYEVTRSDIKILKQIHSLGDEQYKRLLAYMKALKKLETMESIVE 120 Query: 124 E 124 E Sbjct: 121 E 121 >UniRef50_A8RI36 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RI36_9CLOT Length = 129 Score = 78.4 bits (192), Expect = 6e-14, Method: Composition-based stats. Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 3/109 (2%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 T+GER+ Y RK +TQ SLA+ + +S + E+ +EP + A+ ++L + W+ Sbjct: 17 TLGERLNYARKQKGYTQDSLAQTIGVSRGVIFNLEKNKTEPQAIVINAVCQILNINKEWL 76 Query: 67 LFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARV 115 G D + + L EL ++ L E EQ L ++A Sbjct: 77 TDGTGDMESGNQAFQSAKLLE---ELYDIAKELSEDEQLFLLDTVKALK 122 >UniRef50_B9WW72 Transcriptional regulator, XRE family n=1 Tax=Streptococcus suis 89/1591 RepID=B9WW72_STRSU Length = 121 Score = 78.4 bits (192), Expect = 6e-14, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 39/75 (52%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 + ++IR R +Q LA+ L IS +VS+WE G++ P L L+++ S +++ Sbjct: 4 LAQQIRILRTAKNLSQDELAEKLYISRQAVSKWENGEATPDIDKLVQLAEIFGVSLDYLV 63 Query: 68 FGDEDKQPTPPVEKP 82 G E ++ ++ Sbjct: 64 LGKEPEKEIVVEQRG 78 >UniRef50_C2E976 Transcriptional regulator n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2E976_9LACO Length = 179 Score = 78.4 bits (192), Expect = 6e-14, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 46/97 (47%) Query: 4 KNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSP 63 K L IG+R++ R +TQ +A+ L +S ++S WE G + P ++ +LS + S Sbjct: 43 KFLNIGKRLKDARIESGYTQEQVAEQLDVSRQTISSWENGRTFPDIVSVVSLSDIYDVSL 102 Query: 64 TWILFGDEDKQPTPPVEKPVALSPKELELLELFNALP 100 ++ GDE + S K+L + N L Sbjct: 103 DVLIKGDEKMLEHLEESTNIVKSNKKLLFAIIANVLT 139 >UniRef50_B6B2C5 Transcriptional regulator, XRE family n=6 Tax=Rhodobacterales RepID=B6B2C5_9RHOB Length = 135 Score = 78.4 bits (192), Expect = 6e-14, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 56/114 (49%), Gaps = 6/114 (5%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 ++ +G+RIR+RR + TQ+ LA+ + I + ++E G + + L+ +++ L+ + Sbjct: 16 DVHVGKRIRHRRWLVGVTQQRLAETVGIKFQQIQKYETGANRVSASRLWDIAESLEVDVS 75 Query: 65 WILFGDEDKQPT-----PPVEKPVALSPKE-LELLELFNALPESEQDTQLAEMR 112 + G +++ L+ KE L+L+ + A+PE ++ R Sbjct: 76 FFFSGLQNEDAAIGDAESGAVPSDILNDKEALDLVRSYYAIPEEQRRRLFDLAR 129 >UniRef50_C3X9A6 Predicted protein n=2 Tax=Oxalobacter formigenes RepID=C3X9A6_OXAFO Length = 131 Score = 78.4 bits (192), Expect = 6e-14, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 37/68 (54%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 I +RI R++L +Q LA+ + ++ +V +WE+ + P G L L+ VL SP +I Sbjct: 4 IAKRIENCRRHLNFSQSELARKVGVTPQAVQKWEKAKTVPRGYTLEKLAGVLGVSPAYIQ 63 Query: 68 FGDEDKQP 75 FG D Sbjct: 64 FGITDASS 71 >UniRef50_C9AY67 Predicted protein n=4 Tax=Enterococcus RepID=C9AY67_ENTCA Length = 304 Score = 78.4 bits (192), Expect = 6e-14, Method: Composition-based stats. Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 6/111 (5%) Query: 1 METKNL-TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVL 59 M N+ IG++I +RK TQ +LA L +S+ +VS WERG+S P + L L+ +L Sbjct: 1 MSEFNMRKIGQQIAAKRKEKNLTQSNLADQLLVSYQAVSNWERGNSLPDIEKLPQLAAIL 60 Query: 60 QCSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAE 110 S +L +P V+ A + + E+ EL + E + E Sbjct: 61 DLSIDELLG-----KPAAAVQHYQAGTAQPEEIAELAPLIKPQELSALIQE 106 >UniRef50_D1BQX9 Transcriptional regulator, XRE family n=2 Tax=Veillonella parvula RepID=D1BQX9_VEIPT Length = 290 Score = 78.4 bits (192), Expect = 6e-14, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 1/86 (1%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + E++R RK +Q LA+ L +S ++++WE G+ P NL ALS V S Sbjct: 1 MDFNEKLREYRKQSGLSQGKLAETLNVSRQAITKWESGNGMPDISNLKALSGVFNVSVDE 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELE 91 +L +E +P P E V E++ Sbjct: 61 LL-SEEAVKPRYPYESIVEYDIDEIK 85 >UniRef50_B1CA13 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CA13_9FIRM Length = 229 Score = 78.4 bits (192), Expect = 6e-14, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 33/67 (49%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +TIG +I R+ +Q LA+ L +S +VS+WE P + LS++ + Sbjct: 1 MTIGNKIMTLRRENNFSQEILAEKLGVSRQAVSKWEAEQCLPDIDKIVKLSELFSVPTDY 60 Query: 66 ILFGDED 72 IL D + Sbjct: 61 ILKEDYE 67 >UniRef50_C0D7S1 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D7S1_9CLOT Length = 228 Score = 78.4 bits (192), Expect = 6e-14, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 32/66 (48%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 ++I + +R R + TQ +A + ++ ++S +E G + P + L L +V Sbjct: 1 MSINQNLRQLRLDCGMTQEQVAAKIGLTRQALSSYESGRTRPDIEMLMRLCEVYGTDLDA 60 Query: 66 ILFGDE 71 IL+G Sbjct: 61 ILYGTS 66 >UniRef50_C2D5V7 XRE family transcriptional regulator n=1 Tax=Lactobacillus brevis subsp. gravesensis ATCC 27305 RepID=C2D5V7_LACBR Length = 245 Score = 78.4 bits (192), Expect = 7e-14, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 33/67 (49%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + +R RRK L TQ+ LA L ++ ++S+WE S P L LS+ L Sbjct: 1 MQFANVLRKRRKELHLTQQQLADKLHVTRQTLSRWENNLSYPNLDTLVNLSEFLAVPLDI 60 Query: 66 ILFGDED 72 +L GD + Sbjct: 61 LLKGDGN 67 >UniRef50_C8P9Q6 DNA-binding protein n=2 Tax=Lactobacillus RepID=C8P9Q6_9LACO Length = 112 Score = 78.4 bits (192), Expect = 7e-14, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 42/76 (55%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +T+G+RI+ R+ + TQ LA+ L +S ++S+WE G + P L +S + + Sbjct: 1 MTLGQRIKEEREKRQWTQDYLAETLNVSRQAISKWEVGSAYPDIDRLVQISNLFDITLDS 60 Query: 66 ILFGDEDKQPTPPVEK 81 ++ GD+ + + + K Sbjct: 61 LIKGDDSLKKSIVITK 76 >UniRef50_Q2Y8T7 Transcriptional regulator, XRE family n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y8T7_NITMU Length = 189 Score = 78.4 bits (192), Expect = 7e-14, Method: Composition-based stats. Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 18/131 (13%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M + I IR R+ LK Q LA+ + +S +V QWE G ++P GK L +++VL+ Sbjct: 1 MYYDGMDIARIIREGREKLKLNQSELAELVGVSPQAVQQWESGATQPRGKRLNKIAEVLK 60 Query: 61 CSPTWILFGDE-----------DKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLA 109 P + FG +QP P SP+ E P SE D + Sbjct: 61 LPPAMMHFGMSLEVPAAPDAAVSRQPENPGRGTRGTSPRVTE-------KPVSENDALIN 113 Query: 110 EMRARVKNFNK 120 ++ ++ +K Sbjct: 114 QVVEAMRRMSK 124 >UniRef50_B6WXX6 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WXX6_9DELT Length = 183 Score = 78.4 bits (192), Expect = 7e-14, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 34/67 (50%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M + +G+ I RRK + TQ LA + +S SV++WE G S P L L VLQ Sbjct: 5 MTEGRIRLGQEILRRRKAMGMTQEELASRMGVSRQSVAKWETGQSSPDIDRLSLLRDVLQ 64 Query: 61 CSPTWIL 67 S ++ Sbjct: 65 TSLDELI 71 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P06966 HTH-type transcriptional regulator dicA n=10 Tax... 148 4e-35 UniRef50_C8TRW1 Predicted phage repressor CI n=30 Tax=Enterobact... 130 1e-29 UniRef50_D2U099 Phage transcriptional regulator n=1 Tax=Arsenoph... 115 5e-25 UniRef50_C2HM44 Helix-turn-helix motif protein n=2 Tax=Lactobaci... 111 9e-24 UniRef50_A6NYY1 Putative uncharacterized protein n=2 Tax=Bacteri... 110 1e-23 UniRef50_C2HKP6 XRE family transcriptional regulator n=2 Tax=Lac... 110 2e-23 UniRef50_C0EID5 Putative uncharacterized protein n=2 Tax=Clostri... 108 5e-23 UniRef50_B8CKR7 Helix-turn-helix motif protein n=1 Tax=Shewanell... 107 9e-23 UniRef50_B0P2E7 Putative uncharacterized protein n=4 Tax=Firmicu... 106 2e-22 UniRef50_B6FTX3 Putative uncharacterized protein n=1 Tax=Clostri... 106 2e-22 UniRef50_C8W889 Transcriptional regulator, XRE family n=2 Tax=At... 106 2e-22 UniRef50_Q5L2Q2 Transcriptional regulator n=3 Tax=Geobacillus ka... 106 2e-22 UniRef50_Q046H9 Transcriptional regulator, xre family n=7 Tax=La... 106 2e-22 UniRef50_C0CR55 Putative uncharacterized protein n=2 Tax=Firmicu... 106 2e-22 UniRef50_C7IG82 Transcriptional regulator, XRE family n=1 Tax=Cl... 106 2e-22 UniRef50_B1KN13 Transcriptional regulator, XRE family n=1 Tax=Sh... 106 3e-22 UniRef50_B7DU45 Transcriptional regulator, XRE family n=1 Tax=Al... 106 3e-22 UniRef50_A6P0Y3 Putative uncharacterized protein n=1 Tax=Bactero... 106 3e-22 UniRef50_B7DTD3 Transcriptional regulator, XRE family n=1 Tax=Al... 105 5e-22 UniRef50_Q5LR46 DNA-binding protein, putative n=1 Tax=Ruegeria p... 104 8e-22 UniRef50_A3CL00 Transcriptional regulator, XRE family, putative ... 104 8e-22 UniRef50_C8WL34 Transcriptional regulator, XRE family n=1 Tax=Eg... 104 8e-22 UniRef50_C6LAB0 Putative helix-turn-helix protein n=1 Tax=Bryant... 104 1e-21 UniRef50_B8FXI2 Transcriptional regulator, XRE family n=2 Tax=De... 103 2e-21 UniRef50_B6G1K3 Putative uncharacterized protein n=1 Tax=Clostri... 103 2e-21 UniRef50_A6NZN1 Putative uncharacterized protein n=1 Tax=Bactero... 103 2e-21 UniRef50_UPI0001C36E3B hypothetical protein RflaF_04317 n=1 Tax=... 103 2e-21 UniRef50_B5CMT0 Putative uncharacterized protein n=4 Tax=Firmicu... 102 2e-21 UniRef50_B7C9Y7 Putative uncharacterized protein n=1 Tax=Eubacte... 102 3e-21 UniRef50_C9LBV6 Putative helix-turn-helix protein n=1 Tax=Blauti... 102 3e-21 UniRef50_B7AVZ0 Putative uncharacterized protein n=1 Tax=Bactero... 102 3e-21 UniRef50_C7BH54 Similar to dica, regulator of dicb encoded by pr... 102 3e-21 UniRef50_C0FTE8 Putative uncharacterized protein n=1 Tax=Rosebur... 102 4e-21 UniRef50_C2HK27 Helix-turn-helix motif protein n=1 Tax=Finegoldi... 102 5e-21 UniRef50_B1CBT7 Putative uncharacterized protein n=1 Tax=Anaerof... 101 6e-21 UniRef50_C3RPR9 Predicted protein n=2 Tax=Bacteria RepID=C3RPR9_... 101 6e-21 UniRef50_B0NE21 Putative uncharacterized protein n=1 Tax=Clostri... 101 6e-21 UniRef50_A6NZ66 Putative uncharacterized protein n=1 Tax=Bactero... 101 7e-21 UniRef50_B9Y7G8 Putative uncharacterized protein n=2 Tax=Firmicu... 101 9e-21 UniRef50_A7B4H5 Putative uncharacterized protein n=1 Tax=Ruminoc... 101 1e-20 UniRef50_B5R8N7 Predicted phage regulatory protein n=9 Tax=Enter... 101 1e-20 UniRef50_B4X5D8 Helix-turn-helix domain protein n=2 Tax=Alcanivo... 100 1e-20 UniRef50_B0MLS3 Putative uncharacterized protein n=1 Tax=Eubacte... 100 1e-20 UniRef50_A9NHP5 Membrane-anchored DNA-binding protein, putative ... 100 1e-20 UniRef50_C2L015 Transcriptional regulator n=10 Tax=Firmicutes Re... 100 1e-20 UniRef50_A4WB55 Transcriptional regulator, XRE family n=8 Tax=En... 100 1e-20 UniRef50_B1SC98 Putative uncharacterized protein n=1 Tax=Strepto... 100 1e-20 UniRef50_A8RFR8 Putative uncharacterized protein n=1 Tax=Eubacte... 100 2e-20 UniRef50_UPI0001C364C2 helix-turn-helix domain-containing protei... 100 2e-20 UniRef50_C2KZU8 Helix-turn-helix motif protein n=3 Tax=Firmicute... 100 2e-20 UniRef50_C6JQJ3 Putative uncharacterized protein n=2 Tax=Fusobac... 100 2e-20 UniRef50_C7G878 Toxin-antitoxin system, antitoxin component, Xre... 100 2e-20 UniRef50_UPI0001C3512F putative transcriptional regulator n=1 Ta... 100 2e-20 UniRef50_B5EK35 Transcriptional regulator, XRE family n=2 Tax=Ac... 100 2e-20 UniRef50_A8SNW9 Putative uncharacterized protein n=1 Tax=Coproco... 99 3e-20 UniRef50_B6AW67 Transcriptional regulator, XRE family n=1 Tax=Rh... 99 3e-20 UniRef50_B9YDL2 Putative uncharacterized protein n=1 Tax=Holdema... 99 3e-20 UniRef50_A9KQE6 Transcriptional regulator, XRE family n=1 Tax=Cl... 99 4e-20 UniRef50_Q28T13 Transcriptional regulator, XRE family n=20 Tax=R... 99 4e-20 UniRef50_Q0AWQ8 Putative transcriptional regulator, XRE family n... 99 4e-20 UniRef50_C7N0U4 Predicted transcriptional regulator n=1 Tax=Slac... 99 4e-20 UniRef50_D0DT23 Transcriptional regulator n=1 Tax=Lactobacillus ... 99 4e-20 UniRef50_C7N384 Predicted transcriptional regulator n=1 Tax=Slac... 99 4e-20 UniRef50_D2U4L3 Phage transcriptional regulator n=1 Tax=Arsenoph... 99 5e-20 UniRef50_A6NPM4 Putative uncharacterized protein n=1 Tax=Bactero... 99 5e-20 UniRef50_B4RE45 Transcriptional regulator, Cro/CI family n=1 Tax... 99 6e-20 UniRef50_D1PIW7 Toxin-antitoxin system, antitoxin component, Xre... 99 6e-20 UniRef50_B6GBG4 Putative uncharacterized protein n=2 Tax=Collins... 98 6e-20 UniRef50_C8WS89 Transcriptional regulator, XRE family n=1 Tax=Al... 98 6e-20 UniRef50_B1R6G0 Helix-turn-helix domain protein n=3 Tax=Clostrid... 98 6e-20 UniRef50_A0RLU0 Transcriptional regulator n=7 Tax=Bacillus RepID... 98 7e-20 UniRef50_B0MS43 Putative uncharacterized protein n=1 Tax=Eubacte... 98 7e-20 UniRef50_A8VQI9 Putative transcriptional regulator, XRE family n... 98 7e-20 UniRef50_B9Z4Y0 Transcriptional regulator, XRE family n=1 Tax=Lu... 98 8e-20 UniRef50_B1C9S1 Putative uncharacterized protein n=1 Tax=Anaerof... 98 8e-20 UniRef50_C7H2U3 Putative helix-turn-helix protein n=1 Tax=Faecal... 98 8e-20 UniRef50_Q4L9W0 Similar to unknown protein n=4 Tax=Staphylococcu... 98 9e-20 UniRef50_D2TVN8 Phage transcriptional regulator n=1 Tax=Arsenoph... 98 9e-20 UniRef50_A6P2G2 Putative uncharacterized protein n=1 Tax=Bactero... 98 9e-20 UniRef50_C3BBP1 Putative uncharacterized protein n=2 Tax=Bacillu... 98 1e-19 UniRef50_A6NZM6 Putative uncharacterized protein n=1 Tax=Bactero... 98 1e-19 UniRef50_D2U0V0 Phage transcriptional regulator n=1 Tax=Arsenoph... 98 1e-19 UniRef50_B1C3C9 Putative uncharacterized protein n=1 Tax=Clostri... 98 1e-19 UniRef50_B9Y589 Putative uncharacterized protein n=1 Tax=Holdema... 98 1e-19 UniRef50_C7G7I6 Toxin-antitoxin system, antitoxin component, Xre... 98 1e-19 UniRef50_A5KM56 Putative uncharacterized protein n=1 Tax=Ruminoc... 98 1e-19 UniRef50_C0VYQ4 Possible transcriptional regulator n=1 Tax=Actin... 97 1e-19 UniRef50_B0MKY5 Putative uncharacterized protein n=1 Tax=Eubacte... 97 1e-19 UniRef50_A4J2Z9 Transcriptional regulator, XRE family n=1 Tax=De... 97 1e-19 UniRef50_Q3ABG7 Putative prophage LambdaCh01, repressor protein ... 97 1e-19 UniRef50_A4E806 Putative uncharacterized protein n=1 Tax=Collins... 97 2e-19 UniRef50_C6J5U3 Transcriptional regulator n=1 Tax=Paenibacillus ... 97 2e-19 UniRef50_C6M778 HTH-type transcriptional regulator DicA n=1 Tax=... 97 2e-19 UniRef50_Q044U1 Transcriptional regulator, xre family n=4 Tax=ro... 97 2e-19 UniRef50_C7N6T3 Predicted transcriptional regulator n=1 Tax=Slac... 97 2e-19 UniRef50_C8TM97 Predicted phage repressor protein n=15 Tax=Esche... 97 2e-19 UniRef50_A9VI55 Transcriptional regulator, XRE family n=68 Tax=B... 97 2e-19 UniRef50_B0SWF3 Transcriptional regulator, XRE family n=2 Tax=Ca... 97 2e-19 UniRef50_Q896S6 Putative transcriptional regulator n=1 Tax=Clost... 97 2e-19 UniRef50_A9KHQ0 Transcriptional regulator, XRE family n=1 Tax=Cl... 97 2e-19 UniRef50_C7H8I0 SOS-response transcriptional repressor n=4 Tax=R... 96 2e-19 UniRef50_C0C4Y4 Putative uncharacterized protein n=1 Tax=Clostri... 96 3e-19 UniRef50_Q0H244 Immunity repressor protein n=1 Tax=Geobacillus p... 96 3e-19 UniRef50_Q3ERK0 Transcriptional regulator, MerR family n=2 Tax=B... 96 3e-19 UniRef50_A4VWF1 Putative uncharacterized protein n=8 Tax=Lactoba... 96 3e-19 UniRef50_C5WHH0 Putative uncharacterized protein n=4 Tax=Firmicu... 96 3e-19 UniRef50_UPI0001C37439 XRE family transcriptional regulator n=1 ... 96 3e-19 UniRef50_Q88UM2 Prophage Lp2 protein 9 n=1 Tax=Lactobacillus pla... 96 3e-19 UniRef50_B7I085 Helix-turn-helix domain protein n=48 Tax=Bacilla... 96 3e-19 UniRef50_A6NW39 Putative uncharacterized protein n=1 Tax=Bactero... 96 3e-19 UniRef50_C0Z6E6 Putative DNA-binding protein n=1 Tax=Brevibacill... 96 3e-19 UniRef50_A8SS10 Putative uncharacterized protein n=1 Tax=Coproco... 96 4e-19 UniRef50_Q1CP27 Transcriptional regulator, Cro/CI family n=8 Tax... 96 4e-19 UniRef50_C0EBZ8 Putative uncharacterized protein n=2 Tax=Clostri... 96 4e-19 UniRef50_C8W874 Transcriptional regulator, XRE family n=2 Tax=At... 96 4e-19 UniRef50_C0BEF9 Putative uncharacterized protein n=2 Tax=Clostri... 96 5e-19 UniRef50_D2U1N5 Phage transcriptional regulator n=1 Tax=Arsenoph... 96 5e-19 UniRef50_C9A6X0 Putative uncharacterized protein n=3 Tax=Enteroc... 95 5e-19 UniRef50_B1C771 Putative uncharacterized protein n=1 Tax=Anaerof... 95 5e-19 UniRef50_B5UTN8 Transcriptional regulator Xre n=10 Tax=Bacillus ... 95 5e-19 UniRef50_B1CA13 Putative uncharacterized protein n=1 Tax=Anaerof... 95 5e-19 UniRef50_B6GE04 Putative uncharacterized protein n=1 Tax=Collins... 95 5e-19 UniRef50_A3ICU1 Putative uncharacterized protein n=1 Tax=Bacillu... 95 6e-19 UniRef50_C4F7U6 Putative uncharacterized protein n=2 Tax=Collins... 95 6e-19 UniRef50_C7GBK6 Transcriptional regulator of NagC/XylR family, s... 95 7e-19 UniRef50_A4SLB7 Phage repressor n=1 Tax=Aeromonas salmonicida su... 95 7e-19 UniRef50_C6D7D3 Transcriptional regulator, XRE family n=1 Tax=Pa... 95 7e-19 UniRef50_C8P5D3 Putative uncharacterized protein n=1 Tax=Lactoba... 95 8e-19 UniRef50_B6IN19 DNA-binding protein, putative n=1 Tax=Rhodospiri... 94 8e-19 UniRef50_C0EHX1 Putative uncharacterized protein n=1 Tax=Clostri... 94 9e-19 UniRef50_Q039U4 Transcriptional regulator, xre family n=4 Tax=La... 94 9e-19 UniRef50_C3WDT3 Transcriptional regulator n=1 Tax=Fusobacterium ... 94 9e-19 UniRef50_C7GAS5 DNA-binding protein n=6 Tax=Clostridiales RepID=... 94 1e-18 UniRef50_C0WT71 Transcriptional regulator n=1 Tax=Lactobacillus ... 94 1e-18 UniRef50_A4VYH7 Predicted transcriptional regulator n=8 Tax=Stre... 94 1e-18 UniRef50_C2E976 Transcriptional regulator n=1 Tax=Lactobacillus ... 94 1e-18 UniRef50_A8SXS8 Putative uncharacterized protein n=1 Tax=Coproco... 94 1e-18 UniRef50_C9RC67 Transcriptional regulator, XRE family n=1 Tax=Am... 94 1e-18 UniRef50_C3RNM0 Predicted protein n=3 Tax=Bacteria RepID=C3RNM0_... 94 1e-18 UniRef50_A8UD60 DNA-binding protein n=2 Tax=Carnobacterium sp. A... 94 1e-18 UniRef50_A9KS31 Transcriptional regulator, XRE family n=1 Tax=Cl... 94 1e-18 UniRef50_Q2RSF5 Transcriptional regulator, XRE family n=1 Tax=Rh... 94 1e-18 UniRef50_D2U8U5 Putative transcriptional regulator transcription... 94 2e-18 UniRef50_C6IXM6 SOS-response transcriptional repressor n=1 Tax=P... 94 2e-18 UniRef50_B0NKE5 Putative uncharacterized protein n=3 Tax=Firmicu... 94 2e-18 UniRef50_C6PS92 Transcriptional regulator, XRE family n=1 Tax=Cl... 94 2e-18 UniRef50_A8Z5P9 DNA-binding protein n=35 Tax=Staphylococcus RepI... 94 2e-18 UniRef50_B3XM16 Transcriptional regulator, XRE family n=1 Tax=La... 94 2e-18 UniRef50_C0FPM6 Putative uncharacterized protein n=1 Tax=Rosebur... 94 2e-18 UniRef50_B4W5L7 Helix-turn-helix domain protein n=2 Tax=Brevundi... 93 2e-18 UniRef50_C5N0R4 Cro/CI family transcriptional regulator n=24 Tax... 93 2e-18 UniRef50_C2D5V7 XRE family transcriptional regulator n=1 Tax=Lac... 93 2e-18 UniRef50_D2NYS3 Transcriptional regulator n=1 Tax=Listeria monoc... 93 3e-18 UniRef50_C7XUY0 Transcriptional regulator n=1 Tax=Lactobacillus ... 93 3e-18 UniRef50_C9RVX6 Transcriptional regulator, XRE family n=4 Tax=Ge... 93 3e-18 UniRef50_A7VTE0 Putative uncharacterized protein n=1 Tax=Clostri... 93 3e-18 UniRef50_C7XXQ9 Transcriptional regulator n=2 Tax=Lactobacillus ... 93 3e-18 UniRef50_Q734R0 DNA-binding protein n=53 Tax=Bacillus cereus gro... 93 3e-18 UniRef50_A4EAV3 Putative uncharacterized protein n=1 Tax=Collins... 93 3e-18 UniRef50_C6PF27 Transcriptional regulator, XRE family n=1 Tax=Th... 93 3e-18 UniRef50_C0ZFK5 Putative DNA-binding protein n=1 Tax=Brevibacill... 93 4e-18 UniRef50_C0XCM7 Bacteriophage transcriptional regulator n=2 Tax=... 93 4e-18 UniRef50_C2L099 DNA-binding protein n=1 Tax=Oribacterium sinus F... 93 4e-18 UniRef50_Q5FQ46 Putative uncharacterized protein n=1 Tax=Glucono... 92 4e-18 UniRef50_Q5WIQ0 Transcriptional regulator n=1 Tax=Bacillus claus... 92 5e-18 UniRef50_B0T4G6 Transcriptional regulator, XRE family n=20 Tax=c... 92 5e-18 UniRef50_Q3AB02 DNA-binding protein n=2 Tax=Clostridia RepID=Q3A... 92 5e-18 UniRef50_A3CR12 Transcriptional regulator, XRE family, putative ... 92 5e-18 UniRef50_C7G9M2 Toxin-antitoxin system, antitoxin component, Xre... 92 6e-18 UniRef50_A5IWD1 Transcriptional regulator, XRE family n=37 Tax=S... 92 6e-18 UniRef50_Q2W6H5 Predicted transcriptional regulator n=14 Tax=Alp... 92 6e-18 UniRef50_A1JLW6 Putative DNA-binding protein n=1 Tax=Yersinia en... 92 7e-18 UniRef50_A7B688 Putative uncharacterized protein n=1 Tax=Ruminoc... 92 7e-18 UniRef50_A7ILE3 Transcriptional regulator, XRE family n=1 Tax=Xa... 92 7e-18 UniRef50_C3LHJ4 Prophage LambdaBa02, repressor protein n=12 Tax=... 91 7e-18 UniRef50_C5RHU2 Transcriptional regulator, XRE family n=1 Tax=Cl... 91 8e-18 UniRef50_B9WW72 Transcriptional regulator, XRE family n=1 Tax=St... 91 8e-18 UniRef50_Q4V0T2 Possible transcriptional regulator n=2 Tax=Bacil... 91 8e-18 UniRef50_C6D0K8 Transcriptional regulator, XRE family n=2 Tax=Ba... 91 8e-18 UniRef50_B9CLW2 Transcriptional regulator, xre family n=1 Tax=At... 91 8e-18 UniRef50_C8ZWK7 DNA binding protein n=4 Tax=Enterococcus RepID=C... 91 8e-18 UniRef50_P69202 Repressor protein C2 n=23 Tax=root RepID=RPC2_BPP22 91 8e-18 UniRef50_B5LPU6 Helix-turn-helix domain protein n=2 Tax=Viruses ... 91 8e-18 UniRef50_B6WXX6 Putative uncharacterized protein n=1 Tax=Desulfo... 91 8e-18 UniRef50_B0K4S0 Transcriptional regulator, XRE family n=12 Tax=C... 91 9e-18 UniRef50_C9L3X9 Toxin-antitoxin system, antitoxin component, Xre... 91 9e-18 UniRef50_B0MKM0 Putative uncharacterized protein n=1 Tax=Eubacte... 91 9e-18 UniRef50_B6B2C5 Transcriptional regulator, XRE family n=6 Tax=Rh... 91 1e-17 UniRef50_A9IXT1 Transcriptional regulator n=8 Tax=Bartonella Rep... 91 1e-17 UniRef50_C2CXS6 Transcription regulator n=1 Tax=Lactobacillus br... 91 1e-17 UniRef50_B6FIX0 Putative uncharacterized protein n=2 Tax=Clostri... 91 1e-17 UniRef50_B3GVX0 Putative uncharacterized protein n=1 Tax=Strepto... 91 1e-17 UniRef50_B4ETH6 Putative phage repressor n=1 Tax=Proteus mirabil... 91 1e-17 UniRef50_A8RWL6 Putative uncharacterized protein n=1 Tax=Clostri... 91 1e-17 UniRef50_C5EI29 Predicted protein n=1 Tax=Clostridiales bacteriu... 91 1e-17 UniRef50_C6L9K9 DNA-binding protein n=1 Tax=Bryantella formatexi... 91 1e-17 UniRef50_C2E445 Transcriptional regulator n=3 Tax=Lactobacillus ... 91 1e-17 UniRef50_Q5WGX0 Transcriptional regulator n=1 Tax=Bacillus claus... 91 1e-17 UniRef50_C9AY67 Predicted protein n=4 Tax=Enterococcus RepID=C9A... 91 1e-17 UniRef50_D0WI56 Toxin-antitoxin system, antitoxin component, Xre... 91 1e-17 UniRef50_A3CPI8 Transcriptional regulator, XRE family, putative ... 91 1e-17 UniRef50_C2HC66 Transcriptional regulator n=2 Tax=Enterococcus f... 91 1e-17 UniRef50_Q73AA1 DNA-binding protein n=4 Tax=Bacillus cereus grou... 91 2e-17 UniRef50_A7B234 Putative uncharacterized protein n=1 Tax=Ruminoc... 91 2e-17 UniRef50_B0A9T9 Putative uncharacterized protein n=3 Tax=Firmicu... 90 2e-17 UniRef50_C0EJ64 Putative uncharacterized protein n=1 Tax=Clostri... 90 2e-17 UniRef50_C4F7U4 Putative uncharacterized protein n=2 Tax=Collins... 90 2e-17 UniRef50_Q70CB1 Putative transcriptional regulator n=2 Tax=Strep... 90 2e-17 UniRef50_A7VII3 Putative uncharacterized protein n=1 Tax=Clostri... 90 2e-17 UniRef50_A4ISZ9 Prophage LambdaBa04, DNA-binding protein n=3 Tax... 90 2e-17 UniRef50_C8P9Q6 DNA-binding protein n=2 Tax=Lactobacillus RepID=... 90 2e-17 UniRef50_A5MYL3 Phage-related protein n=2 Tax=Clostridium kluyve... 90 2e-17 UniRef50_B9MR24 Transcriptional regulator, XRE family n=1 Tax=An... 90 2e-17 UniRef50_D2TX49 Phage transcriptional regulator n=1 Tax=Arsenoph... 90 2e-17 UniRef50_D0I2W5 Hypothetical transcriptional regulator n=1 Tax=G... 90 2e-17 UniRef50_C8WKX0 Transcriptional regulator, XRE family n=1 Tax=Eg... 90 2e-17 UniRef50_Q7M7F6 Similar to phage transcriptional repressor n=2 T... 90 3e-17 UniRef50_C6C7K6 Transcriptional regulator, XRE family n=7 Tax=Pr... 90 3e-17 UniRef50_C5SHB6 Transcriptional regulator, XRE family n=1 Tax=As... 89 3e-17 UniRef50_C9XPP6 Putative phage regulatory protein n=5 Tax=Clostr... 89 3e-17 UniRef50_D0DT22 DNA-binding protein n=1 Tax=Lactobacillus fermen... 89 3e-17 UniRef50_A5I4G6 Putative DNA-binding phage protein n=1 Tax=Clost... 89 3e-17 Sequences not found previously or not previously below threshold: UniRef50_B0N104 Putative uncharacterized protein n=2 Tax=Bacteri... 100 1e-20 UniRef50_D2RAC0 DNA-binding protein n=2 Tax=Actinobacteria (clas... 100 2e-20 UniRef50_Q5WNW9 BcrR n=10 Tax=Firmicutes RepID=Q5WNW9_ENTFA 99 3e-20 UniRef50_C2M038 DNA-binding protein n=1 Tax=Staphylococcus homin... 99 5e-20 UniRef50_A4J892 Transcriptional regulator, XRE family n=1 Tax=De... 97 1e-19 UniRef50_C8WHP2 Transcriptional regulator, XRE family n=1 Tax=Eg... 97 2e-19 UniRef50_B0ME54 Putative uncharacterized protein n=2 Tax=Clostri... 96 3e-19 UniRef50_D2Q726 Xre-type transcriptional regulator n=2 Tax=Bifid... 96 5e-19 UniRef50_C0FQ24 Putative uncharacterized protein n=1 Tax=Rosebur... 95 6e-19 UniRef50_UPI0001C3633A Xre-type transcriptional regulator n=1 Ta... 95 6e-19 UniRef50_C0BUH4 Putative uncharacterized protein n=1 Tax=Bifidob... 95 8e-19 UniRef50_C2EY84 Possible transcriptional regulator n=2 Tax=Lacto... 94 1e-18 UniRef50_A5Z7J4 Putative uncharacterized protein n=1 Tax=Eubacte... 94 1e-18 UniRef50_Q03NN3 Transcriptional regulator, xre family n=1 Tax=La... 94 1e-18 UniRef50_C0C2T3 Putative uncharacterized protein n=1 Tax=Clostri... 93 2e-18 UniRef50_A1HR30 Putative prophage repressor n=2 Tax=Firmicutes R... 93 4e-18 UniRef50_A5ZU94 Putative uncharacterized protein n=1 Tax=Ruminoc... 92 5e-18 UniRef50_Q03UG5 Transcriptional regulator, xre family n=2 Tax=Le... 92 6e-18 UniRef50_Q03N50 Transcriptional regulator, xre family n=2 Tax=La... 92 6e-18 UniRef50_C0CY08 Putative uncharacterized protein n=1 Tax=Clostri... 91 1e-17 UniRef50_D2JDW2 Transcriptional regulator, xre family n=1 Tax=St... 91 1e-17 UniRef50_A8RA35 Putative uncharacterized protein n=2 Tax=Firmicu... 91 1e-17 UniRef50_UPI0001C37AAA DNA-binding protein n=1 Tax=Ruminococcus ... 91 1e-17 UniRef50_C6JC03 Transcriptional regulator n=9 Tax=Clostridiales ... 91 1e-17 UniRef50_B4WDR6 Helix-turn-helix domain protein n=1 Tax=Brevundi... 90 2e-17 UniRef50_C0WXM9 Bacteriophage transcriptional regulator n=2 Tax=... 90 2e-17 UniRef50_A6LK16 Transcriptional regulator, XRE family n=1 Tax=Th... 90 3e-17 UniRef50_C0EJ65 Putative uncharacterized protein n=1 Tax=Clostri... 89 3e-17 >UniRef50_P06966 HTH-type transcriptional regulator dicA n=10 Tax=Enterobacteriaceae RepID=DICA_ECOLI Length = 135 Score = 148 bits (375), Expect = 4e-35, Method: Composition-based stats. Identities = 135/135 (100%), Positives = 135/135 (100%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ Sbjct: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 Query: 61 CSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNK 120 CSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNK Sbjct: 61 CSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNK 120 Query: 121 LFEELLKARQRTNKR 135 LFEELLKARQRTNKR Sbjct: 121 LFEELLKARQRTNKR 135 >UniRef50_C8TRW1 Predicted phage repressor CI n=30 Tax=Enterobacteriaceae RepID=C8TRW1_ECO26 Length = 135 Score = 130 bits (327), Expect = 1e-29, Method: Composition-based stats. Identities = 73/135 (54%), Positives = 96/135 (71%), Gaps = 2/135 (1%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 T+G+RIR RRK + +Q L+KA +S S+S WE + P G+NL L++VLQCS Sbjct: 1 MNEKTLGQRIRERRKQVGLSQNGLSKAAGVSGSSISLWESDHTAPRGQNLHRLAEVLQCS 60 Query: 63 PTWILFGDEDKQPTPPV--EKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNK 120 PTWILFGDEDK P PPV + + LS ELE+L L+ ALP+SEQ QL+E+RARV+NFN+ Sbjct: 61 PTWILFGDEDKTPAPPVSLDSALDLSEDELEMLRLYRALPKSEQQAQLSELRARVENFNR 120 Query: 121 LFEELLKARQRTNKR 135 LF ELL+AR+R + Sbjct: 121 LFTELLEARKRNKHQ 135 >UniRef50_D2U099 Phage transcriptional regulator n=1 Tax=Arsenophonus nasoniae RepID=D2U099_9ENTR Length = 137 Score = 115 bits (288), Expect = 5e-25, Method: Composition-based stats. Identities = 57/135 (42%), Positives = 87/135 (64%), Gaps = 2/135 (1%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 T+GERI+ RR+ LK +QR+LA L I+HVS+SQWER +S P G+NL AL+K L C Sbjct: 1 MNMKTLGERIKARRQELKLSQRALASILGIAHVSISQWERNESTPKGENLMALAKTLHCE 60 Query: 63 PTWILFGDEDKQPTPPV--EKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNK 120 P+W+ + + E P+ LS + LL+LF+ LP+SEQ+ + +R + + +++ Sbjct: 61 PSWLFEEQGNLPISASELPEAPIKLSDLQKTLLDLFDELPDSEQEELVESLREKKQYYDQ 120 Query: 121 LFEELLKARQRTNKR 135 LFE+L K R R N++ Sbjct: 121 LFEQLAKKRIRINRQ 135 >UniRef50_C2HM44 Helix-turn-helix motif protein n=2 Tax=Lactobacillus acidophilus RepID=C2HM44_LACAC Length = 321 Score = 111 bits (277), Expect = 9e-24, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 48/111 (43%), Gaps = 10/111 (9%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + +G++I RK +Q +LA+ + +S +VS+WE S P + + LS++ + + Sbjct: 1 MKLGQKITQLRKKSHLSQEALAEKMNVSRQAVSKWESNQSIPDIEKIVDLSELFGVTTDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVK 116 +L + P + + +E ++ LP + + K Sbjct: 61 LL------KNGTPSFELPGKTTEEKQI----KKLPSIDDQQITQYLEVAKK 101 >UniRef50_A6NYY1 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A6NYY1_9BACE Length = 267 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 47/92 (51%), Gaps = 1/92 (1%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +T+GE+I+ RK +Q +LA+ + ++ ++S+WE G S P + LS + S + Sbjct: 1 MTLGEKIQKLRKQRGLSQEALAEKVTVTRQTISKWELGQSLPDLDFIAQLSDIFNVSSDY 60 Query: 66 ILFGD-EDKQPTPPVEKPVALSPKELELLELF 96 ++ + + P ++ LS + ++ + Sbjct: 61 LIKDEMTEPDELPYKKRNYRLSERSKRIILVI 92 >UniRef50_C2HKP6 XRE family transcriptional regulator n=2 Tax=Lactobacillus acidophilus RepID=C2HKP6_LACAC Length = 174 Score = 110 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 42/80 (52%) Query: 2 ETKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQC 61 E +++ ++I R + +Q LA+ L +S SVS+WE G ++P + ALS + Sbjct: 38 EVIRMSLNQKIAQLRNDNNWSQEELAEKLNVSRQSVSKWESGQAKPDLDKIIALSDIFDV 97 Query: 62 SPTWILFGDEDKQPTPPVEK 81 S ++L D +++ P K Sbjct: 98 STDYLLKDDNEEKSNPSTNK 117 >UniRef50_C0EID5 Putative uncharacterized protein n=2 Tax=Clostridium RepID=C0EID5_9CLOT Length = 261 Score = 108 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 43/93 (46%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + E+++ RK +Q LA+ L +S +VS+WE G S P +NL ALS + + Sbjct: 1 MQLNEKLQILRKEAGLSQERLAEKLGVSRQAVSKWESGQSTPDIENLSALSDLFGVTLDE 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNA 98 ++ + QP V + + + + Sbjct: 61 LIKKESAPQPAQAVRPAYGGTARSYRFEYEYKS 93 >UniRef50_B8CKR7 Helix-turn-helix motif protein n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CKR7_SHEPW Length = 328 Score = 107 bits (269), Expect = 9e-23, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 43/98 (43%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + ++I RK +Q LA+ + +S SVS+WE +S P + L+++ + S + Sbjct: 1 MILADKIIRLRKQCGWSQEDLAEKMNVSRQSVSKWESANSIPDLNRIITLAEIFEVSTDF 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESE 103 +L + + T L E L + SE Sbjct: 61 LLKDETEVSETLESVSQTNLISLEQALAYTDKKVTVSE 98 >UniRef50_B0P2E7 Putative uncharacterized protein n=4 Tax=Firmicutes RepID=B0P2E7_9CLOT Length = 204 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 37/78 (47%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + +RI+Y RK+ +Q LA + +S +VS+WE S P + + +S + + Sbjct: 1 MNMADRIQYLRKSKGISQEELADKVGVSRQAVSKWESEQSTPDLEKIIIMSDFFGVTTDY 60 Query: 66 ILFGDEDKQPTPPVEKPV 83 IL G E K + Sbjct: 61 ILKGIEPVADKEQKNKEL 78 >UniRef50_B6FTX3 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTX3_9CLOT Length = 333 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 2/113 (1%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + E+I RK +Q LA+ + +S SVS+WE S P + LS+V S + Sbjct: 1 MILAEKIMELRKKNGWSQEELAEKIHVSRQSVSKWESSASIPDLSKILLLSQVFGVSTDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNF 118 +L +D + T E V + ++ E + E + + R K Sbjct: 61 LL--RDDIEETQKAEIFVEETVEKAAGGETIYKISLEESKEYIKDRRCAAKRI 111 >UniRef50_C8W889 Transcriptional regulator, XRE family n=2 Tax=Atopobium RepID=C8W889_ATOPD Length = 364 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 54/129 (41%), Gaps = 5/129 (3%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + E+I RK +Q LA+ L +S SVS+WE S P + + +S++ S + Sbjct: 1 MLLSEKIMSLRKRNGWSQEELARQLNVSRQSVSKWESMASMPDIQKIMTMSELFGVSTDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEEL 125 +L + + P A + E E + E + ++K L E Sbjct: 61 LLKDEMEDLPATAASLDSAETSSESATPESSSQTNEKD-----NYSSTKIKVSLDLATEY 115 Query: 126 LKARQRTNK 134 L ++T++ Sbjct: 116 LDTIEKTSR 124 >UniRef50_Q5L2Q2 Transcriptional regulator n=3 Tax=Geobacillus kaustophilus RepID=Q5L2Q2_GEOKA Length = 125 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 1/114 (0%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 +G+R+R R+ K TQ L K + ++ VS+S +E G+ P + L L+ + ++L Sbjct: 7 LGDRLRKLRQEKKLTQEELGKKINVTKVSISGYENGNRTPDTETLQKLADFFNVTTDYLL 66 Query: 68 FGDEDKQPTPPVEKPVALSPKELEL-LELFNALPESEQDTQLAEMRARVKNFNK 120 + P + P L EL L + PE ++ L ++ Sbjct: 67 GRTDHPNPPDQDDIPEELKDPELGLFFKELAEAPEERREQLLKIWEILKSEGDR 120 >UniRef50_Q046H9 Transcriptional regulator, xre family n=7 Tax=Lactobacillus RepID=Q046H9_LACGA Length = 334 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 48/111 (43%), Gaps = 5/111 (4%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + +G++I RK +Q LA+ + +S +VS+WE S P + + LS++ + + Sbjct: 1 MRLGQKIADLRKKNNLSQEGLAEKMNVSRQAVSKWESEQSIPDIEKIVNLSELFGVTTDY 60 Query: 66 ILFGDE-----DKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEM 111 +L E + +K LS + ++ + + +A + Sbjct: 61 LLKSGEPSFELKNEDINDKDKLPVLSDELVKKYLAASQKSSKLRALAIALI 111 >UniRef50_C0CR55 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=C0CR55_9FIRM Length = 341 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 43/113 (38%), Gaps = 5/113 (4%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + E+I RK +Q LA+ +S S+S+WE S P + LS++ Q S + Sbjct: 1 MLLSEKILTLRKKNGWSQEELAEKCGVSRQSISKWEGNLSTPELSKIVLLSELFQVSTDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNF 118 +L D Q E P +P + +E + K Sbjct: 61 LLKEDVQPQTDTDAELPPMEAPSH-----SLRQVTLAEATAFIQAREQAAKKM 108 >UniRef50_C7IG82 Transcriptional regulator, XRE family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IG82_9CLOT Length = 213 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 41/80 (51%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + I +RI+ RK +Q LA L +S +VS+WE G S P + + +S+ + + + Sbjct: 1 MNISDRIQSLRKTKGISQEQLADELGVSRQAVSKWESGQSMPDIEKIILMSEYFKITTDY 60 Query: 66 ILFGDEDKQPTPPVEKPVAL 85 +L G + + T + A+ Sbjct: 61 LLKGIDLPKDTTEKKPSAAI 80 >UniRef50_B1KN13 Transcriptional regulator, XRE family n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KN13_SHEWM Length = 327 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 43/91 (47%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + E+I RK L +Q LA+ + IS SVS+WE +S P + L+ + + S + Sbjct: 1 MILAEKIIRLRKQLGWSQEELAEKMAISRQSVSKWESANSIPDLNKIIKLADIFEVSTDF 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELF 96 +L + + KP L+ LE + Sbjct: 61 LLKDEYEANSYNDEPKPSNLNQVSLEQATQY 91 >UniRef50_B7DU45 Transcriptional regulator, XRE family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DU45_9BACL Length = 161 Score = 106 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 3/125 (2%) Query: 11 RIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFGD 70 R+R R+ TQ + L +S V+VS +E G P K L ++ + S ++L Sbjct: 10 RLRLLRQMKNWTQEEFGRKLNVSKVTVSSYESGVRTPDAKTLIKIADLFDVSVDYLLGRT 69 Query: 71 EDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEELLKARQ 130 + K E V +S E ELLE F L E++ L R ++ ++ +EL Q Sbjct: 70 DGKNEGYTSE--VLVSEDEKELLERFRNLSENDAKVLLQLARV-LERRGQISDELSPVTQ 126 Query: 131 RTNKR 135 ++ Sbjct: 127 IITEQ 131 >UniRef50_A6P0Y3 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P0Y3_9BACE Length = 259 Score = 106 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 35/72 (48%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 ER+ R+ +Q LA + +S +V +WE G S+P NL A+S+ + ++L Sbjct: 2 FEERLYQLRRERGISQEELANIIGVSRQAVQKWESGASQPNIDNLVAISEYFGVTLDYLL 61 Query: 68 FGDEDKQPTPPV 79 GDE + Sbjct: 62 KGDEPGWEESDI 73 >UniRef50_B7DTD3 Transcriptional regulator, XRE family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DTD3_9BACL Length = 205 Score = 105 bits (262), Expect = 5e-22, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 44/111 (39%), Gaps = 5/111 (4%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWER--GDSEPTGKNLFALSKVLQCSP 63 ++ +R++ R+ +Q LA+ L I S++ +E D P + L ++ + Sbjct: 1 MSFSDRLKTLREQRGISQERLAEILGIPRSSIAHYESPENDRLPRPERLKKIADFFGVTT 60 Query: 64 TWILFGDEDKQP---TPPVEKPVALSPKELELLELFNALPESEQDTQLAEM 111 +++ D + ++ +E LLE LP ++ + Sbjct: 61 DYLIGRTNDPHGHAIVNFADSEPIVTAEERRLLETVRELPPEKKQELMDFA 111 >UniRef50_Q5LR46 DNA-binding protein, putative n=1 Tax=Ruegeria pomeroyi RepID=Q5LR46_SILPO Length = 134 Score = 104 bits (261), Expect = 8e-22, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 63/121 (52%), Gaps = 7/121 (5%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M+T + +G RIR RR L +Q L +A+ + V ++E G + + L+A+++VL Sbjct: 1 MDTVDTVVGRRIRARRSALGLSQAELGRAVGVRFQQVQKYESGANRVSASRLWAIAEVLD 60 Query: 61 CSPTWILFGDEDKQ------PTPPVEKPVALSPKE-LELLELFNALPESEQDTQLAEMRA 113 + G + PV++ + L ++ +E++E++++LP +++ LA +R Sbjct: 61 VHISHFFEGIQAPDSGVIDGSDAPVDRLMFLQDRDSVEMVEIYSSLPPAQKRAVLAFVRT 120 Query: 114 R 114 Sbjct: 121 M 121 >UniRef50_A3CL00 Transcriptional regulator, XRE family, putative n=2 Tax=Streptococcus RepID=A3CL00_STRSV Length = 205 Score = 104 bits (261), Expect = 8e-22, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 36/79 (45%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + +RI+Y RK +Q LA L +S +VS+WE S P + ++S + + + Sbjct: 1 MNLSDRIQYLRKARGISQEGLADQLGVSRQAVSKWESEQSMPDLDKIISMSDYFEVTTDY 60 Query: 66 ILFGDEDKQPTPPVEKPVA 84 +L G E + Sbjct: 61 LLKGMEPVVQKEEEQSIKH 79 >UniRef50_C8WL34 Transcriptional regulator, XRE family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WL34_EGGLE Length = 380 Score = 104 bits (260), Expect = 8e-22, Method: Composition-based stats. Identities = 28/89 (31%), Positives = 47/89 (52%) Query: 4 KNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSP 63 N+ I +R+ RRK +Q +LA L +S +VS+WER +S P NL AL+++ S Sbjct: 1 MNVEIAQRLAERRKQAGLSQEALAARLGVSRQAVSKWERSESSPDTDNLIALAQLYGLSL 60 Query: 64 TWILFGDEDKQPTPPVEKPVALSPKELEL 92 +L+ DE+ + E + ++ E Sbjct: 61 DDLLYVDEEIRDDVTFEAADRAAKRQAEQ 89 >UniRef50_C6LAB0 Putative helix-turn-helix protein n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LAB0_9FIRM Length = 330 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 46/113 (40%), Gaps = 8/113 (7%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + E+I RK +Q LA+ L++S SVS+WE G S P L ALS++ + + Sbjct: 1 MILAEKIMDLRKKNGWSQEELAQQLRVSRQSVSKWEGGQSVPDLDKLLALSQIFGVTLDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNF 118 ++ + + + + E D LA ++ + Sbjct: 61 LVKDEISSEEVQYTATDIPEDD--------LPHVSVEEADAFLATVQTAARQI 105 >UniRef50_B8FXI2 Transcriptional regulator, XRE family n=2 Tax=Desulfitobacterium hafniense RepID=B8FXI2_DESHD Length = 322 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 37/79 (46%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + E+I RK+ +Q LA+ + +S S+S+WE + P + L+++ + + Sbjct: 1 MILAEKILSLRKSNGWSQEELAEKMNVSRQSISKWESAAAIPDINRILELARLFGVTTDY 60 Query: 66 ILFGDEDKQPTPPVEKPVA 84 +L D + ++ Sbjct: 61 LLKDDFETAVYSGADETEN 79 >UniRef50_B6G1K3 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G1K3_9CLOT Length = 359 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 10/140 (7%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +T+ E+I RK +Q LA+ L IS SVS+WE G+S PT + L +S++ + S + Sbjct: 1 MTLSEKIMNLRKKNGWSQEELAERLDISRQSVSKWESGESVPTLEKLIRISEIFEVSTDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPES--------EQDTQLAEMRARVKN 117 +L D ++ + + ++ E + E+ ++ R + Sbjct: 61 LLKDDFKEEKFDRNKSSIYMNKIEESSYINNRNISSDIAIDRIIGEEKANENVIKRRKTS 120 Query: 118 FNKLFE--ELLKARQRTNKR 135 F ++ EL + + R Sbjct: 121 FEEVSNYIELAEITAKKFAR 140 >UniRef50_A6NZN1 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NZN1_9BACE Length = 171 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 1/73 (1%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +T E+++ RK +Q LA+ L +S ++S+WE G + P N+ +S+ CS + Sbjct: 1 MTFSEKLQRLRKVNGLSQEQLAEKLNVSRQAISKWEMG-AIPDMDNVIKISRFFDCSLDY 59 Query: 66 ILFGDEDKQPTPP 78 ++ + ++ P Sbjct: 60 LMNNEAEETSIKP 72 >UniRef50_UPI0001C36E3B hypothetical protein RflaF_04317 n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C36E3B Length = 322 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 45/109 (41%), Gaps = 3/109 (2%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + +++ RK +Q LA+ L +S SVS+WE S P + +SK+ S + Sbjct: 1 MIFADKLIELRKKSGMSQEELAEKLGVSRQSVSKWEGAQSTPDLNRILEISKIFDVSTDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSP---KELELLELFNALPESEQDTQLAEM 111 +L + + + + + + + E N L + + L + Sbjct: 61 LLKDEIEAGKEISEKSISDETEPPLRRVSMEEANNFLNANGKRAVLTAI 109 >UniRef50_B5CMT0 Putative uncharacterized protein n=4 Tax=Firmicutes RepID=B5CMT0_9FIRM Length = 336 Score = 102 bits (256), Expect = 2e-21, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 39/83 (46%) Query: 4 KNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSP 63 ++ + E+I RK +Q LA+ L +S +VS+WE S P + L ++K+ + S Sbjct: 1 MDMILSEKIAEERKKNGWSQEELAEKLSVSRQAVSKWESASSVPDLQKLLRMAKIFEVST 60 Query: 64 TWILFGDEDKQPTPPVEKPVALS 86 ++L + K+ + Sbjct: 61 DYLLKDEMGKEEVEKISDYRTED 83 >UniRef50_B7C9Y7 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9Y7_9FIRM Length = 334 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 38/73 (52%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 + + ++I RK TQ LA+ L +S SVS+WE + P K + L+ + + S Sbjct: 15 TMILADKIIEERKKNGWTQEDLAQKLGVSRQSVSKWESAGAIPDLKKIIQLADLFEVSTD 74 Query: 65 WILFGDEDKQPTP 77 ++L + +K+ T Sbjct: 75 YLLKDEIEKENTD 87 >UniRef50_C9LBV6 Putative helix-turn-helix protein n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LBV6_RUMHA Length = 336 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 2/90 (2%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + ++I RK +Q LA+ + +S S+S+WE S P + LS+V S + Sbjct: 1 MILADKIVNLRKRAGWSQEELAEKMGVSRQSISKWEGAQSVPDMNRILKLSEVFCVSTDY 60 Query: 66 ILFGDEDKQP--TPPVEKPVALSPKELELL 93 +L D ++ P P+E+ L + E L Sbjct: 61 LLRDDIEEVPCIVNPLEEAEPLEDSKGETL 90 >UniRef50_B7AVZ0 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AVZ0_9BACE Length = 368 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 36/73 (49%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + ++I RK +Q LA+ L +S SVS++E S P + LS++ + + Sbjct: 1 MILADKIINLRKKNGWSQEELAERLGVSRQSVSKYEGAQSVPDLDKILKLSEIFGVTTDY 60 Query: 66 ILFGDEDKQPTPP 78 ++ D +++ Sbjct: 61 LIKDDIEEEQYSE 73 >UniRef50_C7BH54 Similar to dica, regulator of dicb encoded by prophage cp-933 (Putative regulatory protein) n=1 Tax=Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 RepID=C7BH54_PHOAA Length = 135 Score = 102 bits (255), Expect = 3e-21, Method: Composition-based stats. Identities = 46/135 (34%), Positives = 68/135 (50%), Gaps = 3/135 (2%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKI-SHVSVSQWERGDSEPTGKNLFALSKVL 59 M+T +IG RI+ R K +Q +LA+ S + +E G + + LSK L Sbjct: 1 MKTNE-SIGARIKRLRNQQKMSQAALAELCGWASQSRIGNYESGIRNVSTDDAVILSKAL 59 Query: 60 QCSPTWILFGD-EDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNF 118 SP ++FGD E Q E LS +E LLELFN LP+SE D L + + + + Sbjct: 60 GVSPAELMFGDAESSQENETSETCQELSNREKILLELFNELPDSEADELLKTLEEKKRYY 119 Query: 119 NKLFEELLKARQRTN 133 N+L EEL + + + Sbjct: 120 NQLLEELSQKKSKKK 134 >UniRef50_C0FTE8 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FTE8_9FIRM Length = 380 Score = 102 bits (254), Expect = 4e-21, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 41/90 (45%), Gaps = 1/90 (1%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 ME + + ++I RK +Q LA+ L ++ S+S++E S P + LS++ Sbjct: 45 MEEV-MILADKIINLRKKNGWSQEELAEKLGVTRQSISKYEGAQSIPDLDKILKLSEIFG 103 Query: 61 CSPTWILFGDEDKQPTPPVEKPVALSPKEL 90 + +++ + +++ + S + Sbjct: 104 VTTDYLIKDELEEEEYASSQMQENESESDR 133 >UniRef50_C2HK27 Helix-turn-helix motif protein n=1 Tax=Finegoldia magna ATCC 53516 RepID=C2HK27_PEPMA Length = 327 Score = 102 bits (254), Expect = 5e-21, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 16/124 (12%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + ++I RK TQ LA+ L +S SVS+WE G+S P + LS V + Sbjct: 1 MILSDKIILLRKKNNLTQEELAEKLGVSRQSVSKWEMGNSIPDINKIIQLSDVFGVKTDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEEL 125 +L + D + S +E LE + + + + + ++ Sbjct: 61 LLKDEIDD---------IEYSDDTVEELETKKTISVED-------ANDFMSAYEEYSNDV 104 Query: 126 LKAR 129 + Sbjct: 105 ADSI 108 >UniRef50_B1CBT7 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CBT7_9FIRM Length = 310 Score = 101 bits (253), Expect = 6e-21, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 35/94 (37%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 + ++ RK +Q LA+ L +S +VS+WE G S P L L + + Sbjct: 1 MDKMNFNTNLQNLRKIHNLSQEQLAEKLDVSRQAVSKWENGTSYPEMDKLLILCDIFSLN 60 Query: 63 PTWILFGDEDKQPTPPVEKPVALSPKELELLELF 96 ++ G+ E + + ++ Sbjct: 61 MDELVKGNISLDDNSFKEDKALYENAQNKFSKMI 94 >UniRef50_C3RPR9 Predicted protein n=2 Tax=Bacteria RepID=C3RPR9_9MOLU Length = 297 Score = 101 bits (253), Expect = 6e-21, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 38/69 (55%) Query: 2 ETKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQC 61 E +++ + +R RK ++Q LA+ L +S +VS+WE + P ++L LS + +C Sbjct: 3 EVIKMSLSDNLRALRKQKGYSQEQLAERLNVSRQAVSKWESDNGYPEMESLIILSDLFEC 62 Query: 62 SPTWILFGD 70 + +L D Sbjct: 63 TIDDLLKND 71 >UniRef50_B0NE21 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NE21_EUBSP Length = 257 Score = 101 bits (253), Expect = 6e-21, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 36/76 (47%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + E++ R+ +Q LA L I+ SVS+WE G + P L LS++ Q S + Sbjct: 1 MEFSEKLIQLRRKQGMSQEQLADRLGITRQSVSKWESGSAAPELSKLITLSEMFQVSIDY 60 Query: 66 ILFGDEDKQPTPPVEK 81 ++ E+ + E Sbjct: 61 LVKDAEEPKGAEKEES 76 >UniRef50_A6NZ66 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NZ66_9BACE Length = 409 Score = 101 bits (252), Expect = 7e-21, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 43/90 (47%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +T+G+RI RK +Q L + + +S +VS+WE + P N A+S+V S Sbjct: 1 MTLGQRIAALRKEKGLSQEGLGELVGVSRQAVSKWEADKTVPDVNNCIAMSRVFGISLAG 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLEL 95 +L +E LS ++L ++E Sbjct: 61 LLEVEESLGDGAERTGGEQLSEEQLAMVEA 90 >UniRef50_B9Y7G8 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=B9Y7G8_9FIRM Length = 647 Score = 101 bits (251), Expect = 9e-21, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 35/76 (46%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + E I+ RRK TQ LA+ +S +VS+WE G S P+ L L+ S Sbjct: 1 MKLAENIQRRRKAAGWTQEQLAQKCAVSRQAVSKWEAGQSVPSLDKLRQLANCFGISVDE 60 Query: 66 ILFGDEDKQPTPPVEK 81 ++ D +P + Sbjct: 61 LVQDDPAAEPADAHQT 76 >UniRef50_A7B4H5 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B4H5_RUMGN Length = 248 Score = 101 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 6/104 (5%) Query: 2 ETKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQC 61 E N G + RK +TQ+ LA+ L +S+ ++S+WERG S P L L+ +L Sbjct: 6 EIDNQKFGGFVAALRKEKGYTQKELAEKLFLSNKAISKWERGLSLPDIALLEPLADILGV 65 Query: 62 SPTWILFGDEDKQPTPPVE------KPVALSPKELELLELFNAL 99 + +L G+ P E K + LS + + F+ + Sbjct: 66 TVAELLKGERIHAALEPQEMDELLGKTIHLSDNQKHVHSGFHKM 109 >UniRef50_B5R8N7 Predicted phage regulatory protein n=9 Tax=Enterobacteriaceae RepID=B5R8N7_SALG2 Length = 132 Score = 101 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 8/134 (5%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVS-VSQWERGDSEPTGKNLFALSKVL 59 M+T IGER++ R+N + LAK S S ++ +E G ++ L +VL Sbjct: 1 MKTIAEQIGERLKTIRQNRGLSMGRLAKLCGWSGSSRIANYEAGTRSIGAEDAITLGQVL 60 Query: 60 QCSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFN 119 SP ++FG ++ + LS + +LLELFN LP SEQ L R+K + Sbjct: 61 GISPAELMFGKQENANS-------WLSDNQQKLLELFNQLPASEQTRMLDLFEIRLKEID 113 Query: 120 KLFEELLKARQRTN 133 + E+ L++RQ Sbjct: 114 EYVEQYLRSRQHKK 127 >UniRef50_B4X5D8 Helix-turn-helix domain protein n=2 Tax=Alcanivorax sp. DG881 RepID=B4X5D8_9GAMM Length = 119 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 44/108 (40%), Gaps = 2/108 (1%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 ++ ER++ R L TQ L L ++ ++S WE G P + L L VL S Sbjct: 11 MSFPERLKAARLALGLTQEQLGDELHVTKSTISAWENGRDSPGFRLLPKLKAVLGVSLDH 70 Query: 66 ILFGD--EDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEM 111 ++ GD E + E +LL+ + L + LA + Sbjct: 71 LICGDPVEGASELNSKYDAQVRNDAEAQLLKGYRRLSVKRRQGLLAMI 118 >UniRef50_B0MLS3 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MLS3_9FIRM Length = 301 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 36/74 (48%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +++G I++ RK TQ LA+ + +S +VS+WE + P L LS C+ Sbjct: 1 MSLGTNIQFYRKQKNMTQEDLAEFMNVSRQTVSKWESDTAFPETDKLITLSDYFGCTLDE 60 Query: 66 ILFGDEDKQPTPPV 79 ++ G ++ T Sbjct: 61 LIKGSAEENFTEDA 74 >UniRef50_B0N104 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0N104_9FIRM Length = 242 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 36/80 (45%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + + RK +Q LA L +S SVS+WE G S P + + ++ + S Sbjct: 1 MMFNDNLNKYRKQKGLSQEELAFRLGVSRQSVSKWESGQSTPELERIIEIADLFGISLDE 60 Query: 66 ILFGDEDKQPTPPVEKPVAL 85 ++ + + T E+ ++ Sbjct: 61 LIGHESNDYVTVDREELRSV 80 >UniRef50_A9NHP5 Membrane-anchored DNA-binding protein, putative n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NHP5_ACHLI Length = 231 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 41/82 (50%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +T G+R+ RK+ +TQ L + L +S S+S+WE + P + L LSK+ Q S + Sbjct: 1 MTTGQRLAKLRKDHNYTQEELGELLDVSRQSISKWESDQAFPETQKLIELSKLYQTSVDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSP 87 +L + + + + P Sbjct: 61 LLGNENEHTQSNIGDSTHTNEP 82 >UniRef50_C2L015 Transcriptional regulator n=10 Tax=Firmicutes RepID=C2L015_9FIRM Length = 213 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 35/67 (52%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 IG +I+ R K TQ +A+ L +S ++S WE G S P ++ +S+ S ++L Sbjct: 5 IGSKIKAARMEKKFTQEQVAEVLGVSRQTISNWENGKSYPDIISVIKMSECYGVSLDYLL 64 Query: 68 FGDEDKQ 74 G+E Sbjct: 65 KGEEKMS 71 >UniRef50_A4WB55 Transcriptional regulator, XRE family n=8 Tax=Enterobacteriaceae RepID=A4WB55_ENT38 Length = 145 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 52/130 (40%), Gaps = 1/130 (0%) Query: 4 KNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSP 63 N+ ER+ +Q L + + ++ +VS W + P + L K L Sbjct: 10 TNMNFEERLLRALDEAGISQSELGRRVGVNSQTVSNWCNTGNFPRKEKLALFPKALGKPL 69 Query: 64 TW-ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLF 122 W L +E+ L+ ++ LLE+F+ LPE EQ + R++ +K Sbjct: 70 YWFFLTDEEEAHLNATSASKTVLNEQQAALLEIFDQLPEVEQTRFMQLASDRLEELDKFM 129 Query: 123 EELLKARQRT 132 E L R+ Sbjct: 130 AEFLSKRKIE 139 >UniRef50_B1SC98 Putative uncharacterized protein n=1 Tax=Streptococcus infantarius subsp. infantarius ATCC BAA-102 RepID=B1SC98_9STRE Length = 184 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 34/67 (50%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + R+ RK +Q +A+ L +S ++S+WERG + P +L ++ S Sbjct: 1 MELERRLAELRKEKNVSQEEIAEKLYVSRQTISKWERGKTYPDINSLLLMANYFDVSLDH 60 Query: 66 ILFGDED 72 ++ GD D Sbjct: 61 LIKGDVD 67 >UniRef50_A8RFR8 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RFR8_9FIRM Length = 258 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 38/73 (52%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +++GE+I RK +Q +LA+ + + ++S+WE P + L LS + + S + Sbjct: 1 MSLGEKIFKLRKEKGLSQEALAEQVGTTRQAISKWENDQGFPETEKLLRLSNIFEVSTDY 60 Query: 66 ILFGDEDKQPTPP 78 +L ++ + + Sbjct: 61 LLKDEKTVKDSEE 73 >UniRef50_UPI0001C364C2 helix-turn-helix domain-containing protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C364C2 Length = 260 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 32/73 (43%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + GE++ RK +Q +LA+ L + ++S+WE P + L LS + Q + Sbjct: 1 MNFGEKLFNLRKEKGLSQEALAEQLNTTRQAISKWENNHGYPETEKLLKLSDIFQVPVDF 60 Query: 66 ILFGDEDKQPTPP 78 +L + Sbjct: 61 LLKETTGIENQNS 73 >UniRef50_C2KZU8 Helix-turn-helix motif protein n=3 Tax=Firmicutes RepID=C2KZU8_9FIRM Length = 331 Score = 99.9 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 3/85 (3%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + ++I RK +Q LA+ L +S S+S+WE S P + LS+V S + Sbjct: 1 MILADKIIELRKKNGWSQEDLAEKLDVSRQSISKWEGAQSIPDMNKILKLSEVFSVSTDY 60 Query: 66 ILFGD---EDKQPTPPVEKPVALSP 87 +L + + P V+ +L Sbjct: 61 LLKDEIELDSPGEAPKVDTESSLKE 85 >UniRef50_C6JQJ3 Putative uncharacterized protein n=2 Tax=Fusobacterium RepID=C6JQJ3_FUSVA Length = 168 Score = 99.9 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 5/89 (5%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + +I+ RK +Q LA+ L +S SVS+WE G S P + LS + + + + Sbjct: 1 MKLFVKIQQLRKQNGMSQEKLAQLLGVSKQSVSKWESGQSLPEIDKIIQLSNIFEVTTDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLE 94 +L +++ + K KE E+L Sbjct: 61 LLKDVSEEKCIDILRK-----EKEKEVLS 84 >UniRef50_C7G878 Toxin-antitoxin system, antitoxin component, Xre family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G878_9FIRM Length = 111 Score = 99.9 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 48/107 (44%), Gaps = 1/107 (0%) Query: 10 ERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFG 69 R++ R + +Q++LA L +S ++ ++E +EP L A++ + S +++ Sbjct: 2 NRLKDLRLKMGLSQQALADKLNVSQQTICKYENNTNEPNIDMLEAMADIFDVSVDYLIGY 61 Query: 70 DEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVK 116 V + AL+ EL L+ + ++ S + M ++ Sbjct: 62 SSCAHKVEEVSE-TALNEDELAFLKKYRSINPSSRALVQQFMDEFLR 107 >UniRef50_UPI0001C3512F putative transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C3512F Length = 365 Score = 99.9 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 29/60 (48%), Positives = 35/60 (58%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 +GERI Y RK K TQ LA+ L IS +VS+WE G S P L LS+VL S +L Sbjct: 32 MGERITYLRKRKKMTQAQLAEQLGISAQAVSKWESGLSCPDIMTLVPLSQVLGVSTDELL 91 >UniRef50_D2RAC0 DNA-binding protein n=2 Tax=Actinobacteria (class) RepID=D2RAC0_GARVA Length = 328 Score = 99.9 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 34/67 (50%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + ++I RK +Q LA L +S +VS+WE S P + + ALS++ S Sbjct: 1 MILADKILELRKQNGWSQEELADKLGVSRQAVSKWEGAQSIPDMERIIALSRLFGVSTDL 60 Query: 66 ILFGDED 72 ++ + D Sbjct: 61 LVKDEID 67 >UniRef50_B5EK35 Transcriptional regulator, XRE family n=2 Tax=Acidithiobacillus ferrooxidans ATCC 53993 RepID=B5EK35_ACIF5 Length = 152 Score = 99.9 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 18/150 (12%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALK-ISHVSVSQWERGDSEPTGKNLFALSKVL 59 M IG+R++ RK L TQ L K +S +V QWE G ++P L AL K L Sbjct: 1 MLDHMDDIGDRVKKIRKRLGLTQAELGKHAGGLSKSAVHQWENGGTKPAWDALTALRKNL 60 Query: 60 QCSPTWILFGDEDKQPTPPV---------------EKPVALSPKELELLELFNALPESEQ 104 +P W++ G+ L+P++ +L +F+ L S+Q Sbjct: 61 GINPDWVMQGEGAMLQELGTPNAATSIESGADALPFDGRGLTPRQRAMLGIFDRLTSSQQ 120 Query: 105 DTQLAEMRARVKNFNKLFEELLKARQRTNK 134 D + E+ + ++ EEL R++TN Sbjct: 121 DEAMRELEETKRKNEEIIEEL--TRRKTNH 148 >UniRef50_A8SNW9 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SNW9_9FIRM Length = 242 Score = 99.5 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 40/101 (39%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 IG RI+ RK Q A+ + +S +VS+WER + P L + ++L ++ Sbjct: 4 IGSRIQEYRKKAGLNQEEFAEKMGVSRQAVSKWERDKAYPDLDRLVCICEILDVQVGELV 63 Query: 68 FGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQL 108 +G ++ TP S L+ + L Sbjct: 64 YGKGEESETPEEVSRDGTSANNAVHLKNLRGKGRLARLKIL 104 >UniRef50_Q5WNW9 BcrR n=10 Tax=Firmicutes RepID=Q5WNW9_ENTFA Length = 204 Score = 99.5 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 35/77 (45%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + E+++ R TQ LA+ L +S ++S+WE G P ++L +SK + Sbjct: 1 MEFNEKLQQLRTGKNLTQEQLAEQLYVSRTAISKWESGKGYPNMESLKCISKFFSVTIDE 60 Query: 66 ILFGDEDKQPTPPVEKP 82 +L G+E + Sbjct: 61 LLSGEELITLAETENRS 77 >UniRef50_B6AW67 Transcriptional regulator, XRE family n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6AW67_9RHOB Length = 133 Score = 99.1 bits (246), Expect = 3e-20, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 54/129 (41%), Gaps = 10/129 (7%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M ++ IG RI+ RR LK +Q LA+A+ + V ++E G + + L +++ L Sbjct: 1 MTNIDVLIGARIKGRRIALKISQTKLAEAVGVRFQQVQKYESGANRVSASRLLMVAETLG 60 Query: 61 CSPTWILFGDEDKQPTPPVEKPVAL----------SPKELELLELFNALPESEQDTQLAE 110 ++ G ++ + + + E+L L LP+ +Q LA Sbjct: 61 VPISYFFQGLDNAGSADSTDVQPSARATAPMNALSDARVSEILALVETLPKEQQMAVLAF 120 Query: 111 MRARVKNFN 119 +R K Sbjct: 121 LRTLAKTTE 129 >UniRef50_B9YDL2 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDL2_9FIRM Length = 400 Score = 99.1 bits (246), Expect = 3e-20, Method: Composition-based stats. Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M+ + + G+RI RK TQ+ LA L +++ ++S+WERG+ P L L+ L Sbjct: 1 MDAEAM--GKRIAQLRKARNLTQQQLADQLNVTNRAISRWERGEGYPEITLLPKLADSLG 58 Query: 61 CSPTWILFGDEDKQP 75 + IL KQP Sbjct: 59 VTTDEILGHRTRKQP 73 >UniRef50_A9KQE6 Transcriptional regulator, XRE family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KQE6_CLOPH Length = 273 Score = 99.1 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 46/107 (42%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + +++ R+ +Q LA L +S SVS+WE + P L LS++ + S + Sbjct: 1 MKFCDKLIELRRERGLSQEQLADQLDVSRQSVSKWESDQTMPELSKLITLSEIFEVSLDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMR 112 ++ + +K + K++ E + E++ + ++ Sbjct: 61 LMRDYIMDRSGTREKKDNTVDDKDIPNRENRYSSLETQINEINDYIK 107 >UniRef50_Q28T13 Transcriptional regulator, XRE family n=20 Tax=Rhodobacterales RepID=Q28T13_JANSC Length = 126 Score = 99.1 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 52/116 (44%), Gaps = 6/116 (5%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 ++ +G+RIR+RR + TQ+ LA+ + I + ++E G + + L+ + + L Sbjct: 6 DVHVGKRIRHRRWMVGRTQQQLAETVGIKFQQIQKYETGMNRVSASRLWDIGEALDVPVA 65 Query: 65 WILFGDEDKQPTPPVEKPVAL------SPKELELLELFNALPESEQDTQLAEMRAR 114 + G ++ AL + LEL+ + A+PE+++ R Sbjct: 66 YFFEGVGSEEVASDTATGEALPGDLLADREALELVRSYYAIPENQRRRLFDLARVL 121 >UniRef50_Q0AWQ8 Putative transcriptional regulator, XRE family n=2 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AWQ8_SYNWW Length = 359 Score = 99.1 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 47/110 (42%), Gaps = 6/110 (5%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +TI ERI RK +Q LA+ + ++SQ+E G P+ ++L LS L + Sbjct: 1 MTISERINKLRKERNMSQALLAERAGLKAPAISQYESGARSPSFESLIKLSSALGVPSDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARV 115 +L G+E + + ++ + LP +++ L + Sbjct: 61 LLLGEEAAPYEESSDSLSRM------IMHISGMLPFDKREMLLDYALMLL 104 >UniRef50_C7N0U4 Predicted transcriptional regulator n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N0U4_SLAHD Length = 459 Score = 99.1 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 44/107 (41%) Query: 4 KNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSP 63 N + ER+ R+ +Q LA L +S +VS+WER +S P NL AL+K+ + Sbjct: 1 MNYEVAERLAELRRAKGLSQEELAHELGLSRQAVSKWERAESSPDTDNLIALAKLYGMTL 60 Query: 64 TWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAE 110 ++ G + E L + S ++ L + Sbjct: 61 DELVHGPAEAVGHADSGDDADAPDGADESLAEASETTASPNESLLNQ 107 >UniRef50_D0DT23 Transcriptional regulator n=1 Tax=Lactobacillus fermentum 28-3-CHN RepID=D0DT23_LACFE Length = 322 Score = 98.7 bits (245), Expect = 4e-20, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 38/101 (37%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + ++I RK +Q A+ + +S S+S+WE G S P + +S++ S Sbjct: 1 MILADKITNLRKKEGWSQEEFAERMGVSRQSISKWEGGRSTPDMNKILQMSELFGVSTDV 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDT 106 +L D + + + + L D Sbjct: 61 LLKDDLTLEDEVTTAASSVQNDNGEAIYPVSLELANEYMDQ 101 >UniRef50_C7N384 Predicted transcriptional regulator n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N384_SLAHD Length = 200 Score = 98.7 bits (245), Expect = 4e-20, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 36/66 (54%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + GE+++ RK TQ LA+AL +S +VS+WE G P+ +L +S+ + Sbjct: 1 MEFGEKLQELRKARSLTQEQLAEALYVSRTAVSKWESGRGYPSIDSLKEVSRFFSVTIDE 60 Query: 66 ILFGDE 71 ++ DE Sbjct: 61 LISPDE 66 >UniRef50_D2U4L3 Phage transcriptional regulator n=1 Tax=Arsenophonus nasoniae RepID=D2U4L3_9ENTR Length = 137 Score = 98.7 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 49/123 (39%), Positives = 73/123 (59%), Gaps = 3/123 (2%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 + +IGERIR RRK L+ TQ+ L K + +SHV++SQWE+ ++EP G NL +L+ L C+ Sbjct: 1 MEMKSIGERIRLRRKELELTQKQLGKRVGVSHVAISQWEKEETEPKGDNLLSLADALMCT 60 Query: 63 PTWILFGDEDKQP---TPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFN 119 +IL G ++P K L+ +E LLE+FNAL E EQ L E+ N Sbjct: 61 AEYILRGTTSEKPIRCDNDTYKYSRLTKREENLLEMFNALTEDEQKNYLKEITETRANLE 120 Query: 120 KLF 122 +++ Sbjct: 121 RIY 123 >UniRef50_A6NPM4 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NPM4_9BACE Length = 253 Score = 98.7 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 7/105 (6%) Query: 2 ETKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQC 61 + G + R+ TQ+ LA+ L +S +VS+WERG S P L ++ L Sbjct: 3 DIDKERFGGFLLQLRREKNLTQKELAERLFVSDKAVSKWERGLSLPDVGLLLPMADCLGV 62 Query: 62 SPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDT 106 + T +L G+ PVE+ L++ L E E+ Sbjct: 63 TVTELLRGERTAAAQLPVEEVE-------ALVKSTLQLTEEERQA 100 >UniRef50_C2M038 DNA-binding protein n=1 Tax=Staphylococcus hominis SK119 RepID=C2M038_STAHO Length = 118 Score = 98.7 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 34/71 (47%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + I+ RK +Q LA L +S SVS+WE G + P+ L +S + + Sbjct: 1 MELANVIKKYRKLNNWSQDELADILNVSRQSVSKWESGKNYPSLDILVVMSDLFGVTLDQ 60 Query: 66 ILFGDEDKQPT 76 ++ GD + + Sbjct: 61 LVKGDIELKKQ 71 >UniRef50_B4RE45 Transcriptional regulator, Cro/CI family n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RE45_PHEZH Length = 128 Score = 98.7 bits (245), Expect = 6e-20, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 50/117 (42%), Gaps = 1/117 (0%) Query: 2 ETKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQC 61 + ++ +G RIR RK +Q++LA+A ++ + ++ERG + + L +++ L Sbjct: 10 DPVDVAVGARIRLLRKLKGLSQQALAEAAGVTFQQIQKYERGANRVSASMLARIARTLGV 69 Query: 62 SPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPE-SEQDTQLAEMRARVKN 117 + + P LELL+ + LP + + + +R+ Sbjct: 70 PVAEMFGEASPTSSAVDEVAALLAEPGALELLKAYADLPRGASRSALVEFVRSLRSQ 126 >UniRef50_D1PIW7 Toxin-antitoxin system, antitoxin component, Xre family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIW7_9FIRM Length = 399 Score = 98.7 bits (245), Expect = 6e-20, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 36/63 (57%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +T+GE I+ RK +Q +LA+ + +S ++ +WE+ + P+ NL AL+ L S Sbjct: 1 MTLGENIQAARKKKGLSQEALAEQVGVSRQALGKWEKDTALPSLDNLQALAAALDVSVDG 60 Query: 66 ILF 68 +L Sbjct: 61 LLG 63 >UniRef50_B6GBG4 Putative uncharacterized protein n=2 Tax=Collinsella RepID=B6GBG4_9ACTN Length = 320 Score = 98.3 bits (244), Expect = 6e-20, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 34/78 (43%) Query: 2 ETKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQC 61 E ++ + + Y R TQ LA L ++ +VS+WE G S P L L ++ + Sbjct: 5 ERDTMSFRDNLLYLRDARNMTQEQLAMLLGVTRQAVSKWESGASTPDMDRLVRLCEIFEV 64 Query: 62 SPTWILFGDEDKQPTPPV 79 ++ GD +P Sbjct: 65 DLDDLIRGDVTARPVDQA 82 >UniRef50_C8WS89 Transcriptional regulator, XRE family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WS89_ALIAD Length = 163 Score = 98.3 bits (244), Expect = 6e-20, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 50/130 (38%), Gaps = 6/130 (4%) Query: 4 KNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSP 63 +T GER+ R++ +Q +LA+ LK++ ++ +E+G EP + L L+ S Sbjct: 1 MMMTFGERLAQLRRSKGLSQYALAEQLKMTRGQIANYEQGTREPDIETLKKLADFFDVSI 60 Query: 64 TWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFE 123 +++ G P V L+ + LE + + +Q + Sbjct: 61 DFLVLGK------PNVSDFNGLTNEVKRTLEALSQMSVEKQQEVADFAEYLRSKEEQPVV 114 Query: 124 ELLKARQRTN 133 E N Sbjct: 115 EYDVREIAAN 124 >UniRef50_B1R6G0 Helix-turn-helix domain protein n=3 Tax=Clostridium perfringens RepID=B1R6G0_CLOPE Length = 268 Score = 98.3 bits (244), Expect = 6e-20, Method: Composition-based stats. Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 7/100 (7%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + E+++ RK +Q LA+ L IS +VS+WE G S P L LS++ + + Sbjct: 1 MKLAEKLQLIRKREGLSQEDLAEKLGISRQAVSKWESGQSVPDLNKLIILSELYNVTIDY 60 Query: 66 I------LFGDEDKQPTPPVEKP-VALSPKELELLELFNA 98 + G ++K+ + ++ L KE +L+ FN Sbjct: 61 LVKETYEFEGSQEKEISNTGKQYGENLENKETQLIIHFNN 100 >UniRef50_A0RLU0 Transcriptional regulator n=7 Tax=Bacillus RepID=A0RLU0_BACAH Length = 116 Score = 98.3 bits (244), Expect = 7e-20, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 2/112 (1%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 IGE+I+ RKN K TQ L A+ +S +++S +E+G P ++L ++ + ++L Sbjct: 2 IGEKIKELRKNSKMTQEQLGDAIGVSKMAISYFEKGKKSPGRESLEKIADYFGVTTDYLL 61 Query: 68 FGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFN 119 ED + +K V S + +L + +LPE E+ ++ V Sbjct: 62 GRSEDPELNEEEDKTV--SEEGKNILAIIESLPEDERKKAWEQLEMYVNYMQ 111 >UniRef50_B0MS43 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MS43_9FIRM Length = 271 Score = 98.3 bits (244), Expect = 7e-20, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 37/63 (58%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + IG I +RK L TQ++LA+ L +S ++S+WE G S P + L ++ +L+ + Sbjct: 1 MNIGNVISEKRKALGLTQQALAEKLHVSFQAISKWENGTSCPDIELLPQIAAILKTTIDS 60 Query: 66 ILF 68 +L Sbjct: 61 LLG 63 >UniRef50_A8VQI9 Putative transcriptional regulator, XRE family n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VQI9_9BACI Length = 210 Score = 98.3 bits (244), Expect = 7e-20, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 49/91 (53%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + +G I RRK L +Q +A+ + +S +VS+WE G S P+ +L L++VL C Sbjct: 1 MALGTTISQRRKELNLSQAFVAEEMGVSRQAVSKWETGQSVPSTAHLIRLAEVLGCDVQD 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELF 96 + D++ QP P E+ + ++L +F Sbjct: 61 LAEPDQEAQPAQPAEESGSKKDIRMQLAAVF 91 >UniRef50_B9Z4Y0 Transcriptional regulator, XRE family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z4Y0_9NEIS Length = 119 Score = 97.9 bits (243), Expect = 8e-20, Method: Composition-based stats. Identities = 38/114 (33%), Positives = 58/114 (50%), Gaps = 6/114 (5%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + IG RI+ RK + TQ+ LA + + SVSQWE G++EPT N ++++ L+ S W Sbjct: 1 MIIGFRIKEARKARRRTQKWLADEVGVKQSSVSQWEMGETEPTTANCSSVAQALRISFEW 60 Query: 66 ILFGDEDKQPTPP------VEKPVALSPKELELLELFNALPESEQDTQLAEMRA 113 + G + T E L + ELL LF+ LP+ ++ L MR Sbjct: 61 LTTGRGEMDVTYASAVVHVAEPGQDLDDDKKELLALFDQLPKKKRQILLQFMRD 114 >UniRef50_B1C9S1 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C9S1_9FIRM Length = 275 Score = 97.9 bits (243), Expect = 8e-20, Method: Composition-based stats. Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 4/109 (3%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 IG I RK TQ+ LA L I++ ++S+WERG S P L LS +L + Sbjct: 1 MNYKKIGTFICSLRKEKNLTQKELADKLNITNKAISKWERGISCPDISLLIPLSDILDVT 60 Query: 63 PTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEM 111 IL G+ + + + K + L + + L + Sbjct: 61 TNEILNGERE----EISDINEDIDRKVKKTLTYMVNISSEKSKKYLNYI 105 >UniRef50_C7H2U3 Putative helix-turn-helix protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2U3_9FIRM Length = 208 Score = 97.9 bits (243), Expect = 8e-20, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 38/69 (55%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 K + E+++ RK+ TQ LA+AL +S ++S+WE G P+ +L +S+ S Sbjct: 1 MKEVEFHEKLQELRKSRGLTQEELAEALFVSRTAISKWESGRGYPSIDSLKEISRYFSVS 60 Query: 63 PTWILFGDE 71 +L GD+ Sbjct: 61 IDELLSGDQ 69 >UniRef50_Q4L9W0 Similar to unknown protein n=4 Tax=Staphylococcus RepID=Q4L9W0_STAHJ Length = 134 Score = 97.9 bits (243), Expect = 9e-20, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 39/69 (56%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 K ++GERIR RK+ K +Q LA+ L +S S+S WER S P L ++++ S Sbjct: 1 MKTKSVGERIRNLRKSKKMSQEKLAEKLNVSRHSISNWERDVSSPDIHALLEMTELFGVS 60 Query: 63 PTWILFGDE 71 ++ GDE Sbjct: 61 LNHLVKGDE 69 >UniRef50_D2TVN8 Phage transcriptional regulator n=1 Tax=Arsenophonus nasoniae RepID=D2TVN8_9ENTR Length = 130 Score = 97.9 bits (243), Expect = 9e-20, Method: Composition-based stats. Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 4/127 (3%) Query: 2 ETKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQC 61 E IG RI RR L LA + +S V+VSQWERG S G L +S+ L+C Sbjct: 3 EYDREAIGRRIYERRTELGLRAIDLADLIGVSRVAVSQWERGVSVLGGDKLMNISEALKC 62 Query: 62 SPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKL 121 SP WI+ G + + + + + ++++L L LP++E+D + + +V+ + KL Sbjct: 63 SPEWIIAGIDRLEKI----QDLNIEASDIKILRLAQQLPDTEKDNLIKMLEDKVEYYRKL 118 Query: 122 FEELLKA 128 + EL + Sbjct: 119 YTELTQK 125 >UniRef50_A6P2G2 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P2G2_9BACE Length = 297 Score = 97.9 bits (243), Expect = 9e-20, Method: Composition-based stats. Identities = 26/79 (32%), Positives = 39/79 (49%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 N+ G+ IR RK TQ+ LA L I+ +VS+WERG P L L++ L CS Sbjct: 1 MYNMKTGQLIRDLRKEKGMTQKELADKLHITDRAVSKWERGLCAPEISLLEPLAEALGCS 60 Query: 63 PTWILFGDEDKQPTPPVEK 81 ++ G+ + E+ Sbjct: 61 VLDLMAGERTAKAADSQEE 79 >UniRef50_C3BBP1 Putative uncharacterized protein n=2 Tax=Bacillus RepID=C3BBP1_BACMY Length = 188 Score = 97.9 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 39/80 (48%) Query: 2 ETKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQC 61 E + +G +++ RK ++Q LA L ++ +VS+WE P NL LS + Sbjct: 14 EESKMELGSKLKKLRKEHNYSQNQLADKLNVTAQAVSKWENDKCAPDIINLVQLSDLYNV 73 Query: 62 SPTWILFGDEDKQPTPPVEK 81 S +++ D++ Q +E Sbjct: 74 SLDYLIKSDKELQNHLSLEN 93 >UniRef50_A6NZM6 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NZM6_9BACE Length = 296 Score = 97.6 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 44/99 (44%), Gaps = 4/99 (4%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M+ + I++ RK +Q +A L + +VS+WE G S P L ++++L Sbjct: 1 MDMIDKN----IKHFRKAKGMSQEEMAVKLNVVRQTVSKWENGLSVPDADVLIRMAELLN 56 Query: 61 CSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNAL 99 S + +L + + + + + ++ ++L L Sbjct: 57 VSVSQLLGIEAEDKSDKDLSEKLSKLNEQLAKKNQKERL 95 >UniRef50_D2U0V0 Phage transcriptional regulator n=1 Tax=Arsenophonus nasoniae RepID=D2U0V0_9ENTR Length = 232 Score = 97.6 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 36/96 (37%), Positives = 48/96 (50%), Gaps = 13/96 (13%) Query: 10 ERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFG 69 ERIR R + K TQ SL K + +S ++SQWE G +EP GKNL +L+K L + W+L G Sbjct: 4 ERIRQARNHNKMTQESLGKRIGVSKATISQWESGTTEPNGKNLVSLAKALGVTIEWLLDG 63 Query: 70 DEDKQPTP-------------PVEKPVALSPKELEL 92 DE P + L E+EL Sbjct: 64 DEKNAEVNAQLANAKIIGNFAPWDSNTPLGEDEIEL 99 >UniRef50_B1C3C9 Putative uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3C9_9FIRM Length = 335 Score = 97.6 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 49/100 (49%), Gaps = 2/100 (2%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 +E N+ + ++I RK +Q LA+ L ++ S+S+WE S P + + LS++ Sbjct: 10 LEVMNVILADKIIELRKKNGWSQEQLAQKLNVTRQSISKWEGEQSVPDLQKIILLSEIFG 69 Query: 61 CSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALP 100 + +++ ++ + + + V L +++ L E L Sbjct: 70 VTTDYLI--KDEIEEEEFLNEDVDLKVRKVTLTEAKEFLN 107 >UniRef50_B9Y589 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y589_9FIRM Length = 270 Score = 97.6 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 1/126 (0%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + ++++ RRK + +Q LA L +S +VS+WE G P + L LS++L S Sbjct: 1 MNFAQKLQKRRKEVGFSQEQLAFELNVSRQAVSKWESGQGYPEVEKLIQLSELLGISLDE 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEEL 125 ++ + + P+ P++ + + LP+ D R E Sbjct: 61 LMK-ETREHPSAPIKPLDEEEQEWRDEPHSPITLPDDILDEDSLIGRFAYSTDRDTVERY 119 Query: 126 LKARQR 131 L QR Sbjct: 120 LDLNQR 125 >UniRef50_C7G7I6 Toxin-antitoxin system, antitoxin component, Xre family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G7I6_9FIRM Length = 187 Score = 97.6 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 1/83 (1%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 + IG +I RK TQ LA+ L +S ++S+WE + P +++ +S++ S Sbjct: 14 KMEIGNKINQLRKLSGMTQEQLAEKLNVSRQTISKWESDSTSPDLESIVKISRIFHVSLD 73 Query: 65 WILFGDEDKQPTPPVEKPVALSP 87 +L + + ++ + L Sbjct: 74 DLLK-EGEAGVANKTDEQITLED 95 >UniRef50_A5KM56 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KM56_9FIRM Length = 429 Score = 97.6 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 3/105 (2%) Query: 9 GERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILF 68 GE I +RK TQ+ +A+ L +++ +VS+WE P L L K L + IL Sbjct: 48 GEFIARKRKERGMTQKEMAELLGVTNKAVSKWETSQGMPDIGILPELGKALGVTVDEILM 107 Query: 69 GDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRA 113 G++ +Q A+S ++ +LLE+ E + +T + Sbjct: 108 GEQIEQE---KRAETAVSDEDKKLLEIVLERAERKAETIRITWKD 149 >UniRef50_C0VYQ4 Possible transcriptional regulator n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VYQ4_9ACTO Length = 354 Score = 97.2 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 37/83 (44%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 ++ ++ E +++ R TQ LA L +S ++S+WE + P L + + Sbjct: 20 LKGVTMSFRENLQHLRSTRGLTQERLAVLLGVSRQAISKWESDRAYPEMDKLLTICDLFG 79 Query: 61 CSPTWILFGDEDKQPTPPVEKPV 83 C+ ++ GD +E P+ Sbjct: 80 CTLDELVTGDLRTTDADTLEDPL 102 >UniRef50_B0MKY5 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKY5_9FIRM Length = 159 Score = 97.2 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 12/124 (9%) Query: 10 ERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFG 69 E+++ RK+ TQ LA+ L IS S ++ER P+ + L ++ + ++L Sbjct: 3 EQLQQLRKSRGLTQDDLAEILGISLSSYQKYERDAISPSYETLCKIADFYHVTTDYLLGR 62 Query: 70 DEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEELLKAR 129 + P + L + ++E F + P+ + L ++ E K R Sbjct: 63 E----PATDPFDMLQLPEDQKSVMERFASFPDDVRAIILDAIKE--------LAEAAKKR 110 Query: 130 QRTN 133 QR N Sbjct: 111 QRLN 114 >UniRef50_A4J2Z9 Transcriptional regulator, XRE family n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J2Z9_DESRM Length = 115 Score = 97.2 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 50/115 (43%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 ++ G R++ R+ ++ LAK L +S+ ++S++E + P + + ++ + + Sbjct: 1 MSFGNRLKSLREKNNISREELAKLLDLSYWAISKYENNERIPDHETINKIADYFIVTIDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNK 120 +L ++ P+P L L +++ ++A V++ + Sbjct: 61 LLGRSDNPSPSPKSTIDEEWPGVANILRRNGKKLTPADKKRIEKIIKAAVEDTDD 115 >UniRef50_Q3ABG7 Putative prophage LambdaCh01, repressor protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ABG7_CARHZ Length = 254 Score = 97.2 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 33/80 (41%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + G+R+R R TQ LAK L I ++S +E +P L LS S + Sbjct: 1 MNFGQRLRQLRTERDLTQAELAKLLSIGESTISFYESNKRQPDFDTLIKLSNFFNVSIDF 60 Query: 66 ILFGDEDKQPTPPVEKPVAL 85 +L ++ K + L Sbjct: 61 LLGRTDESNKFIQNTKTIPL 80 >UniRef50_A4J892 Transcriptional regulator, XRE family n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J892_DESRM Length = 139 Score = 97.2 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 44/114 (38%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 TIGER+R RK + +A L ++ SV+ +E G L AL+ S ++ Sbjct: 26 TIGERLRQLRKEKNINREDVANLLGVTVRSVTNYESGQRNLDPDQLIALADYYDVSMDYL 85 Query: 67 LFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNK 120 ++ +P L L ++ ++A V++ ++ Sbjct: 86 TGRSDNPKPPQTTTIDDEWPEVANVLRRNGKKLTTEDKKRIATIIKAAVEDIDE 139 >UniRef50_A4E806 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E806_9ACTN Length = 238 Score = 97.2 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 41/79 (51%) Query: 4 KNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSP 63 N+ +R+ R++ +Q LA+ L +S +VS+WER +S P +NL +L+K+ S Sbjct: 1 MNVETAQRLADLRRSKGFSQEGLARKLGLSRQAVSKWERAESSPDTENLISLAKLYGVSL 60 Query: 64 TWILFGDEDKQPTPPVEKP 82 +L ++ + E Sbjct: 61 DELLNPSDEIEDDIEFENE 79 >UniRef50_C6J5U3 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J5U3_9BACL Length = 143 Score = 96.8 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 49/129 (37%), Gaps = 4/129 (3%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 ++ R++ RK K TQ L L ++ VS+S +E G+ P L +S V S + Sbjct: 1 MSFPYRLKQLRKEHKWTQEELGAKLNLTKVSISGYENGNRTPDMDTLIKISNVFNVSIDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEEL 125 ++ + + P+ L + P EQ + A + ++ Sbjct: 61 LVGKSDVRSVDSPIISGQVLKNS----ITNSPKPPLLEQIFFDGFLEASNEEKEEIIRYW 116 Query: 126 LKARQRTNK 134 + ++ K Sbjct: 117 HEEIKKKKK 125 >UniRef50_C6M778 HTH-type transcriptional regulator DicA n=1 Tax=Neisseria sicca ATCC 29256 RepID=C6M778_NEISI Length = 218 Score = 96.8 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 1/86 (1%) Query: 4 KNLTIGERIRYRRKNLKHTQRSLAKAL-KISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 N TIG+RIR +RK K TQ+ LAK L ISHV++SQWE ++P +NL+ LS+VL C Sbjct: 1 MNKTIGQRIRQKRKEFKWTQQELAKKLKDISHVAISQWESNTTKPNAENLYELSQVLGCD 60 Query: 63 PTWILFGDEDKQPTPPVEKPVALSPK 88 W+L G+ + T V + + K Sbjct: 61 LGWLLKGEGEDTNTNVVFIEDSNNRK 86 >UniRef50_Q044U1 Transcriptional regulator, xre family n=4 Tax=root RepID=Q044U1_LACGA Length = 115 Score = 96.8 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 6/121 (4%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 K++ IG+RIR R + + +Q L+K L +S ++++WE G +EP+ L L++ S Sbjct: 1 MKSM-IGDRIRELRTSHRLSQTELSKLLHVSQQTITKWENGKAEPSSGALAKLAEYFDVS 59 Query: 63 PTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLF 122 ++L D+ +P K V L + L + E + D A + + + + Sbjct: 60 ADYLLGSDKTSEP-----KSVDLEKDPVVLSYGGRPVSEEDMDVIKAILERHKNDGDVHY 114 Query: 123 E 123 E Sbjct: 115 E 115 >UniRef50_C7N6T3 Predicted transcriptional regulator n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N6T3_SLAHD Length = 196 Score = 96.8 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 34/65 (52%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + +G RIR R +Q LA+ + +S +VS WE G + P ++L +S + S Sbjct: 1 MEVGNRIREERDRANLSQEGLAEKIFVSRQTVSNWETGKTYPDVQSLLLMSNLFGVSIDS 60 Query: 66 ILFGD 70 ++ GD Sbjct: 61 LVKGD 65 >UniRef50_C8TM97 Predicted phage repressor protein n=15 Tax=Escherichia coli RepID=C8TM97_ECO26 Length = 133 Score = 96.8 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 58/120 (48%), Gaps = 1/120 (0%) Query: 11 RIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFGD 70 RI + +Q LA+ + ++ +V QW G + P +L L +V W L Sbjct: 11 RISKLLQETGWSQAELARRIGVTQQTVQQWVSGKATPKASSLDKLVEVSGHPLHWFLLPP 70 Query: 71 EDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEELLKARQ 130 E+ + + + + P++ ELL+ F+A PE +Q+ L E++ + K+ + L A++ Sbjct: 71 EECEQIFTPDT-MKIGPRQRELLQAFSAFPEEDQEKMLQEIKDKKKSMEETIARWLAAQK 129 >UniRef50_A9VI55 Transcriptional regulator, XRE family n=68 Tax=Bacillaceae RepID=A9VI55_BACWK Length = 149 Score = 96.8 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 39/85 (45%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + ER++ R+ +Q LA+ + +S SVS+WE G + P+ + + LS + + Sbjct: 1 MIFSERLKEEREKRNWSQNDLAEKIHVSRQSVSKWETGKNYPSIEIIIHLSDLFGITIDE 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKEL 90 +L DE+ + PK Sbjct: 61 LLRSDEELTQKVIEDSKQLAYPKWK 85 >UniRef50_B0SWF3 Transcriptional regulator, XRE family n=2 Tax=Caulobacter sp. K31 RepID=B0SWF3_CAUSK Length = 149 Score = 96.8 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 12/128 (9%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 ++ +G R+R RRK L +Q LA ++ I+ + ++ERG + + L+ ++ LQ S + Sbjct: 11 DIHVGARVRMRRKALGLSQTQLADSVGITFQQLQKYERGANRVSASKLYGMAVTLQTSVS 70 Query: 65 WILFGDEDKQPTPPVEKPV------------ALSPKELELLELFNALPESEQDTQLAEMR 112 W G E+ + LS + LEL LF +P +++ LA + Sbjct: 71 WFFQGLSAVDVANATEEQMLEEHRLKGLQRFLLSSEGLELASLFPQIPPTQRQQLLALAK 130 Query: 113 ARVKNFNK 120 + + + Sbjct: 131 SLIDRGEE 138 >UniRef50_Q896S6 Putative transcriptional regulator n=1 Tax=Clostridium tetani RepID=Q896S6_CLOTE Length = 126 Score = 96.8 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 39/85 (45%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + I ER++ RK ++Q LA L +S ++S+WE G S P N+ LS + S + Sbjct: 1 MEISERLQQLRKLANYSQEQLADMLGVSRQAISKWESGQSNPDISNVIKLSGIYNVSTDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKEL 90 IL G E + ++ Sbjct: 61 ILIGKEPNSELTENKMETKCKVEKK 85 >UniRef50_C8WHP2 Transcriptional regulator, XRE family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WHP2_EGGLE Length = 205 Score = 96.8 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 33/66 (50%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + GE+++ R TQ LA L +S +VS+WE G P +L ++++ S Sbjct: 1 MDFGEKLKALRTERGLTQEQLAAKLYVSRTAVSKWETGGGSPNLDSLQVVARLFDVSVDD 60 Query: 66 ILFGDE 71 +L D+ Sbjct: 61 LLSTDD 66 >UniRef50_A9KHQ0 Transcriptional regulator, XRE family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KHQ0_CLOPH Length = 268 Score = 96.8 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 35/68 (51%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + +GE+I R +Q LA+ L +S S+S+WE G S P L ALS++ S Sbjct: 1 MKLGEKIVMFRTEHHLSQGDLAEKLGVSRQSISKWETGGSVPDLDKLIALSELFDVSLDN 60 Query: 66 ILFGDEDK 73 ++ E K Sbjct: 61 LVKDQEPK 68 >UniRef50_C7H8I0 SOS-response transcriptional repressor n=4 Tax=Ruminococcaceae RepID=C7H8I0_9FIRM Length = 209 Score = 96.4 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 35/76 (46%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 ++ E +R RK +Q LA L ++ +V +WE G S P + L+++L + + Sbjct: 1 MSFPELLRQCRKQKHMSQAELASLLGVTQQAVGKWESGKSSPDPTTVAKLAEILDTTADY 60 Query: 66 ILFGDEDKQPTPPVEK 81 +L + E+ Sbjct: 61 LLGLFDPTAEGQTEER 76 >UniRef50_C0C4Y4 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C4Y4_9CLOT Length = 279 Score = 96.4 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 6/98 (6%) Query: 1 METKNLT-IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVL 59 ME G+ I RK TQ+ LA+ L ++ ++S+WERG S P L L+KVL Sbjct: 1 MEINQSEKTGKFICVMRKEKNLTQKDLAQKLDVTDKAISKWERGISCPDISLLIPLAKVL 60 Query: 60 QCSPTWILFGDEDKQPTPP-----VEKPVALSPKELEL 92 + + +L G+ + P VE+ + S + +L Sbjct: 61 DVTTSELLNGERASEEQPEHAEAMVEEALHYSDRSSKL 98 >UniRef50_Q0H244 Immunity repressor protein n=1 Tax=Geobacillus phage GBSV1 RepID=Q0H244_9CAUD Length = 148 Score = 96.4 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 58/144 (40%), Gaps = 15/144 (10%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 ++ +R+R RK TQ L + + ++ VS+S +E G+ P L AL+ L S + Sbjct: 1 MSFPQRLRMLRKAKGLTQEELGRKVNVTKVSISGYESGNRTPDMDTLKALADALDVSIDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPK--ELELLELFNALP-------------ESEQDTQLAE 110 +L D + + + + EL ++ N L + + Sbjct: 61 LLGRDNTQPTDTKLPALTEKDERDIQKELEKIINGLKTGSGFAAFGGVDIDELDEEDREL 120 Query: 111 MRARVKNFNKLFEELLKARQRTNK 134 + A ++N +L + + K + K Sbjct: 121 LIASLENSLRLAKRIAKQKFTPKK 144 >UniRef50_B0ME54 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0ME54_9FIRM Length = 239 Score = 96.4 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 36/91 (39%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + + RK +Q L L +S +VS+WE G + P L LS++ Q S Sbjct: 1 MEFYKNLNRFRKEKGWSQEELGNRLNVSRQTVSKWELGTTTPEMNKLMELSRIFQVSIDE 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELF 96 ++ V V L + L +F Sbjct: 61 LVGNSNAPGEKEVVYVTVNLHYEYKSRLTVF 91 >UniRef50_Q3ERK0 Transcriptional regulator, MerR family n=2 Tax=Bacillus thuringiensis RepID=Q3ERK0_BACTI Length = 114 Score = 96.4 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 55/119 (46%), Gaps = 5/119 (4%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 +T+G+RI++ R +Q+ LA L ++ ++S +E P+ +N + ++ L S Sbjct: 1 MVTLGDRIKFIRTKKNISQQELADILNVNRSAISLYETNRKSPSRENTYKIATALGVSID 60 Query: 65 WILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFE 123 ++L D P + + + +L++ + +P + T + + +K K + Sbjct: 61 YLLGLQTD-----PSFQTDNIHSETAQLMKRLDNMPSETKQTIINLIDDLLKIHEKSHD 114 >UniRef50_A4VWF1 Putative uncharacterized protein n=8 Tax=Lactobacillales RepID=A4VWF1_STRSY Length = 178 Score = 96.4 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 33/78 (42%) Query: 2 ETKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQC 61 + K + G++I+ RK TQ A L ++ +VS WE + P + L +S V Sbjct: 17 KEKEMNFGQQIKDLRKKKGLTQEQFALKLNVTRQAVSNWENDKNLPDLELLILMSSVFSI 76 Query: 62 SPTWILFGDEDKQPTPPV 79 S ++ G D Sbjct: 77 SLDQLILGGTDMNNMTEK 94 >UniRef50_C5WHH0 Putative uncharacterized protein n=4 Tax=Firmicutes RepID=C5WHH0_STRDG Length = 257 Score = 96.4 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 2/83 (2%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + GE++ RK +Q +LA+ + + ++S+WE P + L LS V + S + Sbjct: 1 MNFGEKLFKLRKEKGISQENLAEQIGTTRQAISKWENNQGFPEVEKLLQLSNVFEVSVDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPK 88 +L +DK EK +S + Sbjct: 61 LL--KDDKTVNCSNEKGYYVSKE 81 >UniRef50_UPI0001C37439 XRE family transcriptional regulator n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37439 Length = 223 Score = 96.0 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 39/78 (50%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M + G+ I+ R L TQ+ LA+ + +S +VS+WERG+ P L AL+ V Sbjct: 21 MNMDQVKTGQLIKRLRTELGMTQKQLAERINVSDKAVSKWERGNGCPDVSLLSALADVFG 80 Query: 61 CSPTWILFGDEDKQPTPP 78 +L G+ DK + Sbjct: 81 TDIRVLLSGEIDKNESEK 98 >UniRef50_Q88UM2 Prophage Lp2 protein 9 n=1 Tax=Lactobacillus plantarum RepID=Q88UM2_LACPL Length = 120 Score = 96.0 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 3/109 (2%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +TIG+RI RK TQ LA A+ +S +++ WE + +L LS + + Sbjct: 1 MTIGKRIANLRKQKSLTQPMLADAMNVSQSTIASWESDRRSVSNDDLIKLSDYFGVTTDY 60 Query: 66 ILFGDEDK---QPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEM 111 +L + + L E + L E E+ M Sbjct: 61 LLGKNGTPKWANEKDTKDLQDFLDANEGSMTYGGEDLTEEEKQQVRVAM 109 >UniRef50_B7I085 Helix-turn-helix domain protein n=48 Tax=Bacillaceae RepID=B7I085_BACC7 Length = 262 Score = 96.0 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 2/86 (2%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + GE++ RK +Q +LA+ L + +VS+WE G P + L + V + S + Sbjct: 1 MGFGEKLFKLRKEKGLSQEALAEKLNTTRQAVSKWENGQGFPETEKLIMIGNVFEVSLDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELE 91 +L E+ + + E +S + E Sbjct: 61 LL--KENAEQSNEKENGYYVSKEMAE 84 >UniRef50_A6NW39 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NW39_9BACE Length = 210 Score = 96.0 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 62/149 (41%), Gaps = 25/149 (16%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + ERI R+ +Q L +AL +S +VS+WE G ++P + + + ++ S + Sbjct: 1 MELNERIAAARRAAGMSQEQLGEALGVSRQAVSKWESGQTKPDLEAVGKMCELFHLSADY 60 Query: 66 ILFGDEDKQPTPPVEK-------------------------PVALSPKELELLELFNALP 100 +L G E+K+ + +P+E + L + +P Sbjct: 61 LLLGKEEKKDDGSSAQAQPQPQAQSQNQTQYTSGGYSLVLVDTNPTPRETLHMLLNSGMP 120 Query: 101 ESEQDTQLAEMRARVKNFNKLFEELLKAR 129 E E D + + A + + L E +A+ Sbjct: 121 EEEVDRLIESLPAVLASGLSLEEAYRRAK 149 >UniRef50_C0Z6E6 Putative DNA-binding protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6E6_BREBN Length = 203 Score = 96.0 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 52/140 (37%), Gaps = 20/140 (14%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 + +R+R RK TQ LA+ + + ++S +E S P L L+ VL + W+L Sbjct: 57 LSQRLRTARKTKGLTQEELAEHVCTTKGTISNYENNHSTPPNDMLRQLADVLDVTTDWLL 116 Query: 68 F-------------GDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRAR 114 G+ + + + + P + L+ + E E+ Sbjct: 117 GRTDEVTAYILPATGETNHRSLDELLQEKIDDPDDYYFLDGYLDASEEEKKEI------- 169 Query: 115 VKNFNKLFEELLKARQRTNK 134 + + L ++ + R + Sbjct: 170 RRYWYDLKKQWKVRKVREER 189 >UniRef50_A8SS10 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SS10_9FIRM Length = 159 Score = 96.0 bits (238), Expect = 4e-19, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 2/88 (2%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +T GER+ R +Q LA+ L +S S+S+WE + P L +S S + Sbjct: 14 MTFGERLYELRNKNNLSQEELAEVLDVSRQSISKWENDKAYPEMTRLLFMSDYFDVSLDY 73 Query: 66 ILFG--DEDKQPTPPVEKPVALSPKELE 91 ++ G E+ + + +S + + Sbjct: 74 LMRGIKKENNEEKVTADDADKISNDKYK 101 >UniRef50_Q1CP27 Transcriptional regulator, Cro/CI family n=8 Tax=root RepID=Q1CP27_STRPF Length = 271 Score = 95.6 bits (237), Expect = 4e-19, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 64/127 (50%), Gaps = 7/127 (5%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKI-SHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 +G+RIR R+ TQ L++ L + ++ +VS+WE+ ++ P GK+L L+++ + ++ Sbjct: 24 LGDRIRKLREGRNMTQTELSEILGMKTYTTVSKWEKNENFPKGKDLKKLAEIFNVTSDYL 83 Query: 67 LFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEELL 126 L + K + + ++ E++ ++N L + Q+ L +++ NK Sbjct: 84 LGLTDSKLG------KITIQNEQPEIVSIYNQLEQPRQEKVLNFANEQLEEQNKTVSIFD 137 Query: 127 KARQRTN 133 K + T Sbjct: 138 KKSEETE 144 >UniRef50_C0EBZ8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0EBZ8_9CLOT Length = 172 Score = 95.6 bits (237), Expect = 4e-19, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 50/90 (55%), Gaps = 3/90 (3%) Query: 1 METK--NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKV 58 M+ + + + E+I+ RK + +Q LA+ + +S ++++WE G + P + + +LS+ Sbjct: 1 MKVRRFTMKLPEKIQRERKKMGLSQEKLAEKIGVSRQAITKWENGLASPELEKIVSLSEC 60 Query: 59 LQCSPTWILFGDEDKQPTPPVEKPVALSPK 88 + S ++L D +PTPP E + + + Sbjct: 61 FKVSTDYLLK-DNITEPTPPQESALKGNKR 89 >UniRef50_C8W874 Transcriptional regulator, XRE family n=2 Tax=Atopobium RepID=C8W874_ATOPD Length = 235 Score = 95.6 bits (237), Expect = 4e-19, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 34/69 (49%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M T + T+G RI R TQ LAK L +S +VS+WE + P L L++ L Sbjct: 1 MTTSSETLGRRIARLRLAKTATQERLAKELNVSPQAVSKWESDINYPDISLLPDLARFLG 60 Query: 61 CSPTWILFG 69 S +L G Sbjct: 61 VSVDELLSG 69 >UniRef50_C0BEF9 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0BEF9_9FIRM Length = 319 Score = 95.6 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 37/92 (40%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 IGE ++ RK TQ LA+ L +S ++S+WE G + P L +++ Sbjct: 1 MDTKKIGEFLKVLRKERGLTQEQLAEILLVSGRTISRWETGTNMPDLSILIKMAEFYNVE 60 Query: 63 PTWILFGDEDKQPTPPVEKPVALSPKELELLE 94 IL G+ + K + LE Sbjct: 61 VKEILDGERKSESMDKELKETLSKVADYNKLE 92 >UniRef50_D2U1N5 Phage transcriptional regulator n=1 Tax=Arsenophonus nasoniae RepID=D2U1N5_9ENTR Length = 131 Score = 95.6 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 2/126 (1%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + +G RIR RK T LA A+ ++S+ ER + L ++ L Sbjct: 1 MNVGTRIRELRKKKGMTILQLATAINSDVGNISRLERNKQGYSENTLLKIASALGVQVAD 60 Query: 66 ILFG--DEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFE 123 + + + +K L ++ELLEL+++LPE E + EMR R ++ +F Sbjct: 61 LFLDSSETNNASRNNKQKYSNLKSDQIELLELYDSLPEEEAKRFIKEMRDRKTHYELIFN 120 Query: 124 ELLKAR 129 E+LK R Sbjct: 121 EMLKKR 126 >UniRef50_D2Q726 Xre-type transcriptional regulator n=2 Tax=Bifidobacterium dentium RepID=D2Q726_9BIFI Length = 408 Score = 95.6 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 34/81 (41%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 ++ E ++Y R TQ LA L +S ++S+WE + P L + + + Sbjct: 1 MSFRENLQYLRGTRNMTQEQLAMLLGVSRQAISKWESEKAYPEMDKLLMICDLFGVTLDD 60 Query: 66 ILFGDEDKQPTPPVEKPVALS 86 ++ GD + + E S Sbjct: 61 LVMGDVRRPNSGIRESTADTS 81 >UniRef50_C9A6X0 Putative uncharacterized protein n=3 Tax=Enterococcus casseliflavus RepID=C9A6X0_ENTCA Length = 204 Score = 95.2 bits (236), Expect = 5e-19, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 36/81 (44%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +TI E+I+ R L TQ+ +++ L ++ ++S WE S P L LS + Q Sbjct: 1 MTIAEKIKESRLKLGLTQQEVSEKLFVTRQTISNWENNRSTPDIDTLIKLSDLYQIDLES 60 Query: 66 ILFGDEDKQPTPPVEKPVALS 86 +L ++ + + Sbjct: 61 LLKPEQLAEEPEIKSDEKKPT 81 >UniRef50_B1C771 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C771_9FIRM Length = 219 Score = 95.2 bits (236), Expect = 5e-19, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 36/83 (43%) Query: 4 KNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSP 63 + E++ RK TQ LA L +S +VS+WE G P+ +L +S+V + Sbjct: 18 IEVEFNEKLVLIRKEKGLTQEELASLLFVSRTAVSKWESGRGYPSIDSLKEISRVFGVTI 77 Query: 64 TWILFGDEDKQPTPPVEKPVALS 86 +L GDE K + Sbjct: 78 DELLCGDEIILLVEEDNKKKGET 100 >UniRef50_B5UTN8 Transcriptional regulator Xre n=10 Tax=Bacillus cereus group RepID=B5UTN8_BACCE Length = 117 Score = 95.2 bits (236), Expect = 5e-19, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 53/108 (49%), Gaps = 2/108 (1%) Query: 10 ERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFG 69 +R++ + TQ+ LA A+ +SHVSV + G P + L ++ L + ++L Sbjct: 5 QRLKLLIEKRGITQQQLADAIGVSHVSVYNYVEGKKSPGTRTLQKIANHLNVTTDYLLGL 64 Query: 70 DEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKN 117 + P ++ + L+ + E+L++ N LPE ++ L ++ V Sbjct: 65 SDS--PDLTADQDLQLTKEAQEILQIINDLPEEQRKKALEQLEMFVSY 110 >UniRef50_B1CA13 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CA13_9FIRM Length = 229 Score = 95.2 bits (236), Expect = 5e-19, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 1/100 (1%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +TIG +I R+ +Q LA+ L +S +VS+WE P + LS++ + Sbjct: 1 MTIGNKIMTLRRENNFSQEILAEKLGVSRQAVSKWEAEQCLPDIDKIVKLSELFSVPTDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELF-NALPESEQ 104 IL D + + + + L + ES + Sbjct: 61 ILKEDYELKISSQSNNVNNNQSVDEALSSQIEREITESIK 100 >UniRef50_B6GE04 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GE04_9ACTN Length = 226 Score = 95.2 bits (236), Expect = 5e-19, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 34/65 (52%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + IG RIR R +Q LA + +S ++S WE G + P ++L LS++ S Sbjct: 18 MKIGGRIRELRAIHGMSQDDLAARVYVSRQTISSWENGKTYPDVQSLLLLSEIFGASVDS 77 Query: 66 ILFGD 70 ++ GD Sbjct: 78 LIKGD 82 >UniRef50_C0FQ24 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FQ24_9FIRM Length = 187 Score = 95.2 bits (236), Expect = 6e-19, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 2/109 (1%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 N +G I RK TQ LA+ L ++ +VS+WERG P K L L+ VL S Sbjct: 1 MDNQKLGIFITELRKEKGLTQAQLAQKLNVTDKAVSKWERGVGFPDIKLLEPLADVLDIS 60 Query: 63 PTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEM 111 ++ + + T ++L + Q L + Sbjct: 61 LLELMKSERLPKTTVSAPDTTDAFQNVIDLASYERKI--ERQRIALVTL 107 >UniRef50_A3ICU1 Putative uncharacterized protein n=1 Tax=Bacillus sp. B14905 RepID=A3ICU1_9BACI Length = 134 Score = 95.2 bits (236), Expect = 6e-19, Method: Composition-based stats. Identities = 30/134 (22%), Positives = 55/134 (41%), Gaps = 6/134 (4%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + R++ RK K TQ LA L+ + ++S +E G S P+ + L LSK+L + + Sbjct: 1 MMFNHRLKAARKAKKLTQEQLAGKLQTTKGTISNYENGHSTPSNEMLVLLSKILDVTTDY 60 Query: 66 ILFGDEDKQPTP------PVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFN 119 +L ++ P E LS + E++ F Q + ++ F Sbjct: 61 LLGVTDNPTPVDYKLAGISDEDYNNLSAYQKEVINFFLTRENLFFKNQPENLLDALEQFE 120 Query: 120 KLFEELLKARQRTN 133 +E K ++ Sbjct: 121 IYYEVWKKQQENKK 134 >UniRef50_UPI0001C3633A Xre-type transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C3633A Length = 291 Score = 95.2 bits (236), Expect = 6e-19, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 35/74 (47%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 ++ + ++ RK TQ LA+ L++S +VS+WE G S P + L + + C Sbjct: 1 MSFSDNLQVLRKRNNMTQEQLAEQLEVSRQAVSKWESGQSYPEMEKLLIICDMFHCDMDS 60 Query: 66 ILFGDEDKQPTPPV 79 ++ GD + Sbjct: 61 LVKGDLTLEDQADA 74 >UniRef50_C4F7U6 Putative uncharacterized protein n=2 Tax=Collinsella RepID=C4F7U6_9ACTN Length = 206 Score = 94.9 bits (235), Expect = 6e-19, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 37/82 (45%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + +G I+ R L +Q LA+ + +S ++S WE G + P ++L LS V + Sbjct: 1 MELGSHIKEHRTELGLSQDDLAERIYVSRQTISNWECGRTYPDVQSLLLLSNVFGVTVDS 60 Query: 66 ILFGDEDKQPTPPVEKPVALSP 87 ++ GD + E + Sbjct: 61 LIKGDVETMAQVMNEAVKKYNA 82 >UniRef50_C7GBK6 Transcriptional regulator of NagC/XylR family, sugar n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GBK6_9FIRM Length = 403 Score = 94.9 bits (235), Expect = 7e-19, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 37/72 (51%) Query: 4 KNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSP 63 +T+ E I+ R Q A+ L IS +VS+WE G S P+ +NL +S++L S Sbjct: 24 DIMTMAENIKTYRNKRGLNQYEFAEKLGISPQAVSKWECGQSCPSIENLCVISEILDVSI 83 Query: 64 TWILFGDEDKQP 75 ++ + D + Sbjct: 84 DTLIGENSDSEK 95 >UniRef50_A4SLB7 Phage repressor n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SLB7_AERS4 Length = 227 Score = 94.9 bits (235), Expect = 7e-19, Method: Composition-based stats. Identities = 28/72 (38%), Positives = 42/72 (58%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +TI +RI RR L ++ +LAKA+ +S VSV +WE G ++P G+ L L+ L + W Sbjct: 1 MTISDRIFSRRTALNLSKTALAKAIGVSDVSVGKWESGLNQPKGRYLNDLAAALGVTVDW 60 Query: 66 ILFGDEDKQPTP 77 +L G D P Sbjct: 61 LLAGSGDGPEQP 72 >UniRef50_C6D7D3 Transcriptional regulator, XRE family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D7D3_PAESJ Length = 150 Score = 94.9 bits (235), Expect = 7e-19, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 39/86 (45%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + GE+++ R++ Q LA+ L +S SVS+WE + P+ + + +S + + Sbjct: 1 MVFGEKLKAMRQSKGWPQDELAEKLFVSRQSVSKWENNQNYPSIEIIIKISDLFGVTIDE 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELE 91 +L DE+ + P+ Sbjct: 61 LLRSDEELTQKVIKDSRQLAYPRLKA 86 >UniRef50_C0BUH4 Putative uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 RepID=C0BUH4_9BIFI Length = 167 Score = 94.9 bits (235), Expect = 8e-19, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 34/83 (40%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 ++ E ++Y R + TQ LA L +S ++S+WE + P L L + + Sbjct: 1 MSFKENLQYLRGSRNMTQEQLAMLLGVSRQAISKWESEKAYPEMDKLLMLCDMFGVTLDD 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPK 88 ++ GD V L+ Sbjct: 61 LVMGDVRASAGCGGAGRVDLAAD 83 >UniRef50_C8P5D3 Putative uncharacterized protein n=1 Tax=Lactobacillus antri DSM 16041 RepID=C8P5D3_9LACO Length = 126 Score = 94.9 bits (235), Expect = 8e-19, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 37/91 (40%), Gaps = 2/91 (2%) Query: 12 IRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFGDE 71 + R+ +Q LA L +S +VS+WE G + P + ++ +LQ S ++ G Sbjct: 8 LANLRQAAGLSQEQLADQLHVSRQAVSKWENGSTLPDIDKIVQIADILQVSLDELVLGKA 67 Query: 72 DKQPTPPVEK--PVALSPKELELLELFNALP 100 +++ L + E + + Sbjct: 68 PTVSQSKLDRLIDAHLQQSQQENHWRYREIN 98 >UniRef50_B6IN19 DNA-binding protein, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6IN19_RHOCS Length = 232 Score = 94.5 bits (234), Expect = 8e-19, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 8/122 (6%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 + RIR RR L +Q LA+ L I+ V ++ERG + + L+ L+++L T+ Sbjct: 20 HVASRIRLRRGLLGMSQSDLARTLGITFQQVQKYERGSNRVSVGKLYRLAEILDVPLTFF 79 Query: 67 LFGDEDKQPTPP--------VEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNF 118 G + P ++ LS +EL+LL + P D + +RA Sbjct: 80 FDGLDLPDLKKPPQTTTGFAEQQSPILSRRELDLLRAWKNSPPEVSDAVASLLRAIAPYV 139 Query: 119 NK 120 ++ Sbjct: 140 DE 141 >UniRef50_C0EHX1 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EHX1_9CLOT Length = 154 Score = 94.5 bits (234), Expect = 9e-19, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 42/113 (37%), Gaps = 11/113 (9%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 R+R R TQ +LAK L +S +V WE G EP + L+ + + ++ Sbjct: 47 FAHRLRQLRLERGLTQAALAKHLDVSQGTVGNWEGGKREPDFATVARLAALFGTTVDDLI 106 Query: 68 FGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNK 120 K T K + L +PE E++ L + + K Sbjct: 107 GNSPTKAET-----------KLILLARKAEHIPEQEREKILQVFEDTIDIYLK 148 >UniRef50_Q039U4 Transcriptional regulator, xre family n=4 Tax=Lactobacillus RepID=Q039U4_LACC3 Length = 185 Score = 94.5 bits (234), Expect = 9e-19, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 39/79 (49%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 GER+ RK +Q LA+A+ IS ++S++E G +EP + L +L S +L Sbjct: 2 FGERLTQLRKQKGLSQNDLAEAIGISRQAISKYENGLAEPDLDKIAKLRDILGVSYADLL 61 Query: 68 FGDEDKQPTPPVEKPVALS 86 + +Q T +++ Sbjct: 62 GKEPKQQITSNNVSSASIT 80 >UniRef50_C3WDT3 Transcriptional regulator n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WDT3_FUSMR Length = 181 Score = 94.5 bits (234), Expect = 9e-19, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 41/92 (44%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 N+ G++I+ +RK TQ L + L +S ++++WE S P K + LS + Sbjct: 18 NMNFGDKIQLQRKKKGMTQEELGEELNVSRQTITKWESNQSFPEIKKIIKLSYFFDVTID 77 Query: 65 WILFGDEDKQPTPPVEKPVALSPKELELLELF 96 ++L + + + ++ ++L Sbjct: 78 YLLKDEIEDEERNVIKIEKEEKNIFSTKIKLL 109 >UniRef50_C2EY84 Possible transcriptional regulator n=2 Tax=Lactobacillus reuteri RepID=C2EY84_LACRE Length = 161 Score = 94.5 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 36/83 (43%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 + ++++ R + +Q +A+ + ++ +VS+WE G S P + L+ S Sbjct: 16 TMEFAKQLKKLRTDKGLSQEDIAQKIHVTRQAVSRWEAGSSVPDLETAVQLAAFFDVSLD 75 Query: 65 WILFGDEDKQPTPPVEKPVALSP 87 W++ + + A++ Sbjct: 76 WLVLNKQLADNITNQDILNAVNE 98 >UniRef50_A5Z7J4 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z7J4_9FIRM Length = 236 Score = 94.5 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 1/79 (1%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +T +++ RK+ +Q LA L +S ++S+WE G + P NL +S CS + Sbjct: 1 MTFSSKLQKLRKDNNLSQEQLASELCVSRQAISKWELG-TLPDINNLVKISNFFDCSLDY 59 Query: 66 ILFGDEDKQPTPPVEKPVA 84 ++ D++ Q Sbjct: 60 LMNDDKEDQFEEEFSNEQN 78 >UniRef50_C7GAS5 DNA-binding protein n=6 Tax=Clostridiales RepID=C7GAS5_9FIRM Length = 252 Score = 94.5 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 3/100 (3%) Query: 2 ETKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQC 61 + N G + RK + TQ+ LA L +S +VS+WERG+S P L ++ VL Sbjct: 3 QINNEKFGHFLAEVRKEKQMTQKDLADKLFVSDKTVSKWERGNSMPNVTLLIPIADVLGI 62 Query: 62 SPTWILFGD---EDKQPTPPVEKPVALSPKELELLELFNA 98 + T +L G+ E+K V + + ++ +L L + Sbjct: 63 TVTELLQGEKLKENKTLNSDVVETLVVNSLDLSLRDTIRQ 102 >UniRef50_C0WT71 Transcriptional regulator n=1 Tax=Lactobacillus buchneri ATCC 11577 RepID=C0WT71_LACBU Length = 132 Score = 94.5 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 49/141 (34%), Gaps = 17/141 (12%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 +L G R++ R K TQ L K + +S S+S +E+ EP+ +L L+ S Sbjct: 1 MIHLDFGTRLKQLRTEHKLTQEELGKKINVSKASISLYEKNLREPSKDSLVTLANFFNVS 60 Query: 63 PTWILFGDEDKQPTPPVEKPVALSPKELELLEL--------FNALPESEQDTQLAEMRAR 114 ++L D+ P LE L + EQ + Sbjct: 61 TDYLLGNTIDRNGHTPSWATNDDKKDLKRFLEENANGMTYGGEGLTDEEQKQVRRVLEGL 120 Query: 115 VKNFNKLFEELLKARQRTNKR 135 K +Q+ N++ Sbjct: 121 F---------WDKQKQKNNRK 132 >UniRef50_A4VYH7 Predicted transcriptional regulator n=8 Tax=Streptococcus RepID=A4VYH7_STRS2 Length = 121 Score = 94.5 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 39/79 (49%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 + ++IR R +Q LA+ L IS +VS+WE G++ P L L+++ S Sbjct: 1 MIMKQLAQQIRVLRTAKNLSQDELAEKLYISRQAVSKWENGEATPDIDKLVQLAEIFGVS 60 Query: 63 PTWILFGDEDKQPTPPVEK 81 +++ G E ++ ++ Sbjct: 61 LDYLVLGKEPEKEIVVEQR 79 >UniRef50_C2E976 Transcriptional regulator n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2E976_9LACO Length = 179 Score = 94.5 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 45/95 (47%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 L IG+R++ R +TQ +A+ L +S ++S WE G + P ++ +LS + S Sbjct: 45 LNIGKRLKDARIESGYTQEQVAEQLDVSRQTISSWENGRTFPDIVSVVSLSDIYDVSLDV 104 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALP 100 ++ GDE + S K+L + N L Sbjct: 105 LIKGDEKMLEHLEESTNIVKSNKKLLFAIIANVLT 139 >UniRef50_Q03NN3 Transcriptional regulator, xre family n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03NN3_LACBA Length = 120 Score = 94.1 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 3/84 (3%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 ME K ++ R+ +Q LA + ++ SVS+WE+G++ P L +L+ VL Sbjct: 1 MENK---FNTQLSQLRRQAGLSQEQLASQVFVTRQSVSKWEQGETTPDLDTLISLATVLG 57 Query: 61 CSPTWILFGDEDKQPTPPVEKPVA 84 S ++ G E Sbjct: 58 VSLDELVSGRSTATHQTETETTFD 81 >UniRef50_A8SXS8 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SXS8_9FIRM Length = 268 Score = 94.1 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 1/82 (1%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 IG RI RK + +Q A + +S +VS+WE + P L + + S ++ Sbjct: 4 IGSRILEYRKKMNMSQEEFANKIGVSRQAVSKWELDKAYPDLDKLVDICGMFGLSLDELV 63 Query: 68 FG-DEDKQPTPPVEKPVALSPK 88 G ++D++P E+ V + Sbjct: 64 NGVEQDEEPVMEAEQRVEIPND 85 >UniRef50_C9RC67 Transcriptional regulator, XRE family n=1 Tax=Ammonifex degensii KC4 RepID=C9RC67_AMMDK Length = 151 Score = 93.7 bits (232), Expect = 1e-18, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 47/119 (39%), Gaps = 7/119 (5%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 +G RI++ R TQ LA+ L + ++ ++ERG + P + L L+ +L+ S +++ Sbjct: 9 LGLRIKFARLRKGLTQAELAQKLNVHPETLGKYERGTNRPDAETLRKLADILEVSTDFLV 68 Query: 68 FGDEDKQPTPPVEKPVALSPKELEL-------LELFNALPESEQDTQLAEMRARVKNFN 119 D P P + E + + + + ++A + Sbjct: 69 GRTNDPSPIPSSLDADVETYLEKIVKGEIPIHFDGVERITPEVLEDLRTILKAALTYIR 127 >UniRef50_C3RNM0 Predicted protein n=3 Tax=Bacteria RepID=C3RNM0_9MOLU Length = 287 Score = 93.7 bits (232), Expect = 1e-18, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 41/80 (51%) Query: 2 ETKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQC 61 + N+ I R+ RK +Q +LA L IS +VS+WER ++ P NL L+K+ Sbjct: 11 KFMNIEIANRLVRLRKEKNLSQEALANELGISRQAVSKWERAEASPDTDNLILLAKLYGM 70 Query: 62 SPTWILFGDEDKQPTPPVEK 81 S +L D+ + + ++ Sbjct: 71 SLDDLLKTDQKEFESGNNQQ 90 >UniRef50_A8UD60 DNA-binding protein n=2 Tax=Carnobacterium sp. AT7 RepID=A8UD60_9LACT Length = 170 Score = 93.7 bits (232), Expect = 1e-18, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 2/130 (1%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + +GER++ R N ++Q +A L IS S+S+WE G+S P NL LS + S Sbjct: 1 MALGERLKASRVNKGYSQGDVADYLHISRQSISKWENGNSYPDLDNLVKLSTYYEVSIDE 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEEL 125 +L E+++ +E+ + ++ L+ + ++ L + + L Sbjct: 61 LL--KENQELKRKIEENEVKIEENVQKLDFIRGNTDKDEGLILLILAFIGSLIPPIGLIL 118 Query: 126 LKARQRTNKR 135 + NK+ Sbjct: 119 APIIIKRNKK 128 >UniRef50_A9KS31 Transcriptional regulator, XRE family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KS31_CLOPH Length = 276 Score = 93.7 bits (232), Expect = 1e-18, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 2/91 (2%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M+ + + + I +RK K TQ+ LA L ++ +VS+WERG S P L LS +L Sbjct: 1 MDNEKMAL--FIADQRKIKKLTQKELAAKLGVTDKAVSKWERGLSCPDISLLSTLSDILG 58 Query: 61 CSPTWILFGDEDKQPTPPVEKPVALSPKELE 91 + +L G+ + S + Sbjct: 59 VTTGELLNGERAVMLENTNVDSIVESTIQYA 89 >UniRef50_Q2RSF5 Transcriptional regulator, XRE family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RSF5_RHORT Length = 196 Score = 93.7 bits (232), Expect = 1e-18, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 45/81 (55%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 + IG+RI RK+ +Q +LAK L ++ +++ +ERG + P + L+++L S Sbjct: 1 MIEIGKRIAEARKDQGMSQYALAKLLGVNQSTIAYYERGRNTPKPWIVEDLARILNVSAA 60 Query: 65 WILFGDEDKQPTPPVEKPVAL 85 ++L+G E P PV V L Sbjct: 61 FLLYGRERTDPLVPVVGRVGL 81 >UniRef50_D2U8U5 Putative transcriptional regulator transcription regulator protein n=1 Tax=Xanthomonas albilineans RepID=D2U8U5_XANAL Length = 115 Score = 93.7 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 3/111 (2%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 + G+R+R RK TQ L +L ++ S+S WE P+ + L L VL+ S Sbjct: 1 MKSFGDRLREARKAAGLTQEQLGFSLGVTKSSISAWENDRETPSFRLLPMLRVVLKRSLD 60 Query: 65 WILFG---DEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMR 112 ++ G Q P A P E LL + +P ++ L ++ Sbjct: 61 DLVCGHVPSARLQEASPDYALQARDPHEQALLTRYRNMPARRREAVLELLK 111 >UniRef50_C6IXM6 SOS-response transcriptional repressor n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IXM6_9BACL Length = 290 Score = 93.7 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 33/142 (23%), Positives = 55/142 (38%), Gaps = 9/142 (6%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M +GERI+ R T R L + ++ ++S+ E+G T +NLFA+S+ Sbjct: 1 MADLKKALGERIKKCRLEKGMTLRELGSQVGMTSSALSKVEKGSVSITSENLFAISEAFG 60 Query: 61 CSPTWILFGDE-------DKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMR- 112 S W+L G E E +E E++ F L + E+ +R Sbjct: 61 VSVDWLLTGKEAQFKDEGYDTNEVRKEATPIFFDEEWEVVSQFRNLSDEEKTFVKQYLRF 120 Query: 113 -ARVKNFNKLFEELLKARQRTN 133 K + E+ + R Sbjct: 121 TQAQKKDQQSSEDEKEDTIREE 142 >UniRef50_B0NKE5 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=B0NKE5_EUBSP Length = 476 Score = 93.7 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 44/83 (53%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 ME +++G+ I RRK+ +Q +A + +S +VS+WE+ S P+ +N+ L+++L+ Sbjct: 1 MEVSRMSLGKNIASRRKSQNFSQEDIATLVGVSRQAVSKWEKDLSSPSTENIIRLAEILR 60 Query: 61 CSPTWILFGDEDKQPTPPVEKPV 83 S + G ++ V Sbjct: 61 VSVEELTGGRPAAAGRDREDRSV 83 >UniRef50_C6PS92 Transcriptional regulator, XRE family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PS92_9CLOT Length = 120 Score = 93.7 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 41/82 (50%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + I ER++ RK+ +++Q LA+ L ++ ++S+WE P N+ LS++ S + Sbjct: 1 MGISERLQKLRKDERYSQEQLAEKLGVTRQAISKWESNQGNPDINNIIKLSEIYNVSTDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSP 87 +L G+E ++ Sbjct: 61 LLKGEEQISKPIEIDSKENKEN 82 >UniRef50_A8Z5P9 DNA-binding protein n=35 Tax=Staphylococcus RepID=A8Z5P9_STAA3 Length = 113 Score = 93.7 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 35/66 (53%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + E I+ +R+ +Q LA LK+S SVS+WE + P+ L A+S + + Sbjct: 1 MKLAEAIKEQRELKGWSQEELANILKVSRQSVSKWESAKNYPSLDILIAMSDLFGITIDH 60 Query: 66 ILFGDE 71 ++ GD Sbjct: 61 LIKGDT 66 >UniRef50_B3XM16 Transcriptional regulator, XRE family n=1 Tax=Lactobacillus reuteri 100-23 RepID=B3XM16_LACRE Length = 203 Score = 93.7 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 36/67 (53%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + I+ +R NL TQ +A+ L ++ ++S WE+G S P L +S + + S Sbjct: 1 MEFRNYIKKQRNNLGFTQAEIAEKLHVTRQTISNWEQGKSYPDLDTLVKISDIYKISIDT 60 Query: 66 ILFGDED 72 +L GD++ Sbjct: 61 LLKGDKN 67 >UniRef50_C0FPM6 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FPM6_9FIRM Length = 305 Score = 93.7 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 48/102 (47%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 + IG+ IR +R TQ+ LA+ ++++ +VS+WE G P L L++ L S Sbjct: 1 MEKEKIGKYIRKKRIEKGMTQQQLAEKIQVTEKAVSRWETGRGVPDISLLEPLAEELHVS 60 Query: 63 PTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQ 104 T +L G+E Q + ++ ++ + + E+ Sbjct: 61 VTELLNGEERVQEEAVHDTKAHMADIDITNVIEYVQENRKEK 102 >UniRef50_C0C2T3 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2T3_9CLOT Length = 262 Score = 93.3 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 35/79 (44%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 L E+++ RK+ TQ LA+ L +S ++S+WE G P+ +L +SK S Sbjct: 59 MAKLEFNEKLQKLRKSKNLTQEQLAEILSVSRTAISKWESGRGYPSIDSLKEISKFFTIS 118 Query: 63 PTWILFGDEDKQPTPPVEK 81 +L +E Sbjct: 119 LDDLLSSEEILNAAQEDTD 137 >UniRef50_B4W5L7 Helix-turn-helix domain protein n=2 Tax=Brevundimonas RepID=B4W5L7_9CAUL Length = 142 Score = 93.3 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 6/115 (5%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 +G R++ +R +L TQ +LA+A+ +S V ++E+G + + LF +++ ++ + Sbjct: 20 HVGRRVQEKRLDLGLTQTALARAVGVSFQQVQKYEKGANRVSASKLFEMAEFMKVDIPFF 79 Query: 67 LFGDEDKQPTPPVEKPVALSPKEL------ELLELFNALPESEQDTQLAEMRARV 115 G D QP E+ + E+ L LP Q L MR + Sbjct: 80 FQGFHDAQPGVGEEEAPGFDHEHKPTKHSVEIARLAPRLPARNQKLILDMMREML 134 >UniRef50_C5N0R4 Cro/CI family transcriptional regulator n=24 Tax=Staphylococcus RepID=C5N0R4_STAA3 Length = 189 Score = 93.3 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 38/80 (47%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + ++I+ R+ ++Q LA+ L +S S+S WE S P NL + ++ + Sbjct: 1 MNLSKQIKKYRERDGYSQEYLAEKLYVSRQSISNWENDKSLPDIHNLLMMCELFNVTLDD 60 Query: 66 ILFGDEDKQPTPPVEKPVAL 85 ++ G P ++ + L Sbjct: 61 LVKGTIPFVPDIKAQRSLNL 80 >UniRef50_C2D5V7 XRE family transcriptional regulator n=1 Tax=Lactobacillus brevis subsp. gravesensis ATCC 27305 RepID=C2D5V7_LACBR Length = 245 Score = 93.3 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 37/88 (42%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + +R RRK L TQ+ LA L ++ ++S+WE S P L LS+ L Sbjct: 1 MQFANVLRKRRKELHLTQQQLADKLHVTRQTLSRWENNLSYPNLDTLVNLSEFLAVPLDI 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELL 93 +L GD + + + L+ Sbjct: 61 LLKGDGNLMVNKISQDVRDKDKYKRYLM 88 >UniRef50_D2NYS3 Transcriptional regulator n=1 Tax=Listeria monocytogenes 08-5578 RepID=D2NYS3_LISMO Length = 108 Score = 92.9 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 46/107 (42%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 G+ ++ R N TQ L L IS VS+S++E G+ P L ++ + S ++L Sbjct: 2 FGKILKTLRINRGMTQADLGSKLNISKVSISKYENGNQFPDTDTLKRIADIFNVSTDFLL 61 Query: 68 FGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRAR 114 +E + L+ +L+ + + AL + ++ + Sbjct: 62 GREEAIPQNLAFDDLRGLTEDDLKKVNNYIALIKKQRQELEEIEKEL 108 >UniRef50_C7XUY0 Transcriptional regulator n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XUY0_9LACO Length = 110 Score = 92.9 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 53/115 (46%), Gaps = 7/115 (6%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 IG++I R + +Q LAKA+ S ++++WE G SEP+ + +++ S ++L Sbjct: 2 IGDKIHELRTQKRMSQTDLAKAIHASQQAITKWENGKSEPSSSVINSIANYFNVSTDYLL 61 Query: 68 FGDEDKQPTPPVEKPVALSPKELELLELFN-ALPESEQDTQLAEMRARVKNFNKL 121 +K P LS + + + + E+D + ++A K ++ Sbjct: 62 GRTSEKLPDKD------LSKNQKLIAYSIDPDTSDEERDAIIEMVQAAKKFRRRI 110 >UniRef50_C9RVX6 Transcriptional regulator, XRE family n=4 Tax=Geobacillus RepID=C9RVX6_GEOSY Length = 135 Score = 92.9 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 2/128 (1%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 +GE ++ RK + TQ LA+ L +S +S+WE G P ++L L ++ S ++ Sbjct: 3 NLGETLKQLRKQRRWTQEQLAEQLNVSRSQISKWENGSLLPDVQSLEKLCQLFNISADFL 62 Query: 67 LFGDEDKQPTPPVEKPVALSPKELE--LLELFNALPESEQDTQLAEMRARVKNFNKLFEE 124 L G+ ++ + + E L L L E + + K E Sbjct: 63 LGGETRQRELLREVTDMYGTADVHETVLAALDYLLHNQEMSEAMYALAKLPDKKRKHVET 122 Query: 125 LLKARQRT 132 ++ + Sbjct: 123 MIMTIVKE 130 >UniRef50_A7VTE0 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VTE0_9CLOT Length = 222 Score = 92.9 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 29/61 (47%) Query: 11 RIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFGD 70 R++ R+N +Q A+ + IS +V WE G EP K + ++ S ++L + Sbjct: 20 RLKELRENAGLSQYGFAEKIGISQSTVGNWEAGSREPNFKTMERIADFFGVSVDYLLGRE 79 Query: 71 E 71 Sbjct: 80 T 80 >UniRef50_C7XXQ9 Transcriptional regulator n=2 Tax=Lactobacillus RepID=C7XXQ9_9LACO Length = 211 Score = 92.9 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 35/70 (50%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + +I+ RRK TQ +AK L ++ ++S WE+G S P L +S Q S Sbjct: 1 MKFSTQIKMRRKKRGLTQSVVAKKLYVTRQTISNWEQGKSYPDLNTLVRISDFYQISIDS 60 Query: 66 ILFGDEDKQP 75 +L D+D Q Sbjct: 61 LLREDQDLQE 70 >UniRef50_Q734R0 DNA-binding protein n=53 Tax=Bacillus cereus group RepID=Q734R0_BACC1 Length = 374 Score = 92.9 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 33/125 (26%), Positives = 49/125 (39%), Gaps = 10/125 (8%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 K + I + I +RK TQ LA + I+ SVS+WE G S P L L+ S Sbjct: 1 MKEINIHKIIADKRKEKGITQEELAAYIGITKASVSKWETGQSYPDITFLPLLASYFNIS 60 Query: 63 PTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLF 122 ++ +P + L E F+ P D + E R +K + F Sbjct: 61 IDELICYTPQMEPEDIRDLYH-------RLAEAFSEKP---FDEVMVECREIIKKYYSCF 110 Query: 123 EELLK 127 LL+ Sbjct: 111 PLLLQ 115 >UniRef50_A4EAV3 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAV3_9ACTN Length = 127 Score = 92.9 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 4/106 (3%) Query: 11 RIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFGD 70 +++ RK ++Q LA AL + +V WERG + P + L+ +K+L P +L Sbjct: 4 KLKQARKENGYSQADLADALNVDIKTVGNWERGKTLPDIEQLWKCAKILHTDPNDLLGWY 63 Query: 71 EDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVK 116 E+ P ++P + E EL+ + E + L R + + Sbjct: 64 EEH----PEDRPTVPAGAEGELIACYRQSTEKRRSKILETARDQAE 105 >UniRef50_C6PF27 Transcriptional regulator, XRE family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PF27_CLOTS Length = 126 Score = 92.5 bits (229), Expect = 3e-18, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 46/112 (41%), Gaps = 7/112 (6%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 IG++++ RK TQ+ +A L +S ++ +E+ EP + + ++ S ++L Sbjct: 2 IGDKLKSLRKIKNVTQKDIADYLGVSPSAIGLYEQNRREPDLETVQKIADFFNVSVDYLL 61 Query: 68 FGDEDKQPTPPVEKPVALSPKELEL----LELFNALP---ESEQDTQLAEMR 112 + + L EL L F LP + E++ + + Sbjct: 62 GRTNKRNVDTSDDVDERLHKVMQELGPDILLAFYDLPNMTDEEKENVITLLE 113 >UniRef50_C0ZFK5 Putative DNA-binding protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZFK5_BREBN Length = 120 Score = 92.5 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 1/106 (0%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 T+G+RIR RK TQ A + +S VS WER + P+ +++ ++++ +I Sbjct: 6 TVGQRIRKLRKANNWTQEQFANRVNVSPQKVSNWERDYTSPSVEDIARIAQICNTESDYI 65 Query: 67 LFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMR 112 L G T + LS E + L E ++ L +R Sbjct: 66 LTGRTSP-LTSSAKSDKHLSEFENLFFFELDKLSEEDKKKALEHVR 110 >UniRef50_C0XCM7 Bacteriophage transcriptional regulator n=2 Tax=Lactobacillus RepID=C0XCM7_9LACO Length = 115 Score = 92.5 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 53/118 (44%), Gaps = 3/118 (2%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + I +RI+ R + TQ+ LA+ L + ++S WE G +EP+ L L+ + S + Sbjct: 1 MNIAQRIKDLRLSKHLTQKELAQLLNVKPTTISGWELGRNEPSIDTLKDLAHIFNVSVDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFE 123 + GD + Q +K + L + L + + + + A + + + +E Sbjct: 61 -MAGDTENQ--NKDKKSIDLEKDPVVLSYGGRPVSDEDMEVIKAILERHKNDGDIHYE 115 >UniRef50_A1HR30 Putative prophage repressor n=2 Tax=Firmicutes RepID=A1HR30_9FIRM Length = 215 Score = 92.5 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 33/76 (43%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 +GER++ R+ TQ+ +A L I+ + + +E EP L L+ S ++L Sbjct: 2 LGERLKSLREQKGITQQEMADILGIARGTYAHYEIDRREPDNATLSRLADFFGVSVDYLL 61 Query: 68 FGDEDKQPTPPVEKPV 83 D+ K + Sbjct: 62 GRDKPKPSITDLFPDA 77 >UniRef50_C2L099 DNA-binding protein n=1 Tax=Oribacterium sinus F0268 RepID=C2L099_9FIRM Length = 203 Score = 92.5 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 26/96 (27%), Positives = 39/96 (40%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 + IG+ I RK TQ LA+ L IS +VS+WE G S P + L L+ + Sbjct: 1 MDQIKIGKFIASCRKEEGMTQAELAEKLGISDRAVSKWETGKSMPDSGIMLELCGFLKIN 60 Query: 63 PTWILFGDEDKQPTPPVEKPVALSPKELELLELFNA 98 +L G+ + L + E+ E Sbjct: 61 VNELLSGERIMAEFYNKQLEDNLLAMKREVEERDRR 96 >UniRef50_Q5FQ46 Putative uncharacterized protein n=1 Tax=Gluconobacter oxydans RepID=Q5FQ46_GLUOX Length = 203 Score = 92.2 bits (228), Expect = 4e-18, Method: Composition-based stats. Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 6/112 (5%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 L +G RIR R+ +Q+ LA + IS +V+ WE G S GK+L +L++VL P Sbjct: 81 LELGRRIRLLREMAGLSQQQLADKVGISRSAVAFWETGRSGHVGKHLGSLAQVLGVEPEV 140 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKN 117 +L G K L+P E +L L+ L + + RV+N Sbjct: 141 LLTGMAYKA------IQATLTPDENTMLTLYRQLDPLIKLQAQKWIERRVRN 186 >UniRef50_A5ZU94 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZU94_9FIRM Length = 208 Score = 92.2 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 49/111 (44%), Gaps = 9/111 (8%) Query: 2 ETKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQC 61 E + IG ++ RK Q LA+ L +S +VS+WE G++ P L ++ Sbjct: 7 EVDQVKIGNFLKKLRKEKGIIQEQLAEILNVSGRTVSRWETGNNMPDISILVDIADYYDI 66 Query: 62 SPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMR 112 S I+ G+ + ++ +E ++ + + +E++ EM+ Sbjct: 67 SIPEIISGERKSE---------MMNEEERKIAKTMSDYATTEKEKIFKEMK 108 >UniRef50_Q5WIQ0 Transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WIQ0_BACSK Length = 135 Score = 92.2 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 36/81 (44%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 + G +++ R+ +Q LAK L +S +V +WE P +N+ LS++ S ++ Sbjct: 3 SFGSKLKQLREEQGFSQEQLAKELNVSRQAVWKWETDKGLPDIQNIVRLSELFDVSTDYL 62 Query: 67 LFGDEDKQPTPPVEKPVALSP 87 L E P K + Sbjct: 63 LKESELIAEPTPSRKWDSEQD 83 >UniRef50_B0T4G6 Transcriptional regulator, XRE family n=20 Tax=cellular organisms RepID=B0T4G6_CAUSK Length = 171 Score = 92.2 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 10/122 (8%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 +L +G R+R RRK L +Q LA AL ++ V ++ERG + + L+ ++K LQ Sbjct: 40 VVDLHVGGRVRMRRKMLGISQEHLADALGLTFQQVQKYERGANRVSASKLYEIAKTLQVP 99 Query: 63 PTWIL---------FGDEDKQPTPPVEKPVALSPKELELLELFNALPESE-QDTQLAEMR 112 ++ GD+ + V +P+ LEL +F + + + L +R Sbjct: 100 VSYFFEGLADPVTDEGDDAGEAANRVITDFLNTPEGLELAAIFPKIGKGRVRRQILDLVR 159 Query: 113 AR 114 A Sbjct: 160 AM 161 >UniRef50_Q3AB02 DNA-binding protein n=2 Tax=Clostridia RepID=Q3AB02_CARHZ Length = 127 Score = 92.2 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 3/123 (2%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 ME IG+RIR R+ L+ ++ A+ L +S V Q ERG+ + + L +++ L Sbjct: 1 MEINTKAIGQRIREEREKLELSREEFAEILGLSDYYVGQLERGERQMSLPVLVNIAQCLH 60 Query: 61 CSPTWILFGDEDKQPT---PPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKN 117 S +++FG +P+ + L + ELL L + E + ++ + Sbjct: 61 VSLDYLIFGSTPFEPSGVQENISFYNFLQNLDPELLSLLSKCSHDELELFKKLIKTILPY 120 Query: 118 FNK 120 K Sbjct: 121 LGK 123 >UniRef50_A3CR12 Transcriptional regulator, XRE family, putative n=5 Tax=Lactobacillales RepID=A3CR12_STRSV Length = 168 Score = 92.2 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 42/87 (48%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + ++ RK +Q LA+ + +S S+S+WE G + P + + LSK+ Q + + Sbjct: 1 MKLANKLFELRKEKGWSQEKLAEQINVSRQSISKWESGQALPELEKVVELSKIFQVTTDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELEL 92 +L D DK PV + E+ Sbjct: 61 LLLEDSDKPEIKPVLSEDEKNRYYKEV 87 >UniRef50_Q03UG5 Transcriptional regulator, xre family n=2 Tax=Leuconostoc RepID=Q03UG5_LEUMM Length = 204 Score = 91.8 bits (227), Expect = 6e-18, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 41/94 (43%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +T + ++ R + +Q LA+ L +S ++S WE + P + + +SKVL + Sbjct: 1 MTFSKSLKELRLLHELSQTQLARKLNVSPKTISNWENERNLPDIELIIKISKVLDVTLDE 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNAL 99 ++ G+ + + + ++ ++ Sbjct: 61 LITGNIQLENKLIKDSHKVFRDNVMSIVVSLYSM 94 >UniRef50_C7G9M2 Toxin-antitoxin system, antitoxin component, Xre family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G9M2_9FIRM Length = 94 Score = 91.8 bits (227), Expect = 6e-18, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 33/80 (41%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + +GE+++ R TQ+ LA L ++ ++S +E PT L +++ S + Sbjct: 1 MNLGEKLKQLRLEKNLTQKQLADRLGVAISAISSYESDTRCPTFDTLIKYARIFHVSTDY 60 Query: 66 ILFGDEDKQPTPPVEKPVAL 85 +L + + Sbjct: 61 LLGLEPIHTLDVSGLSDTEI 80 >UniRef50_A5IWD1 Transcriptional regulator, XRE family n=37 Tax=Staphylococcus RepID=A5IWD1_STAA9 Length = 189 Score = 91.8 bits (227), Expect = 6e-18, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 39/80 (48%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + ++I+ R+ ++Q LA+ L +S S+S WE S P NL + ++ + Sbjct: 1 MNLSKQIKKYRERDGYSQEYLAEKLYVSRQSISNWENDKSLPDIHNLLMMCELFNVTLDD 60 Query: 66 ILFGDEDKQPTPPVEKPVAL 85 ++ G P V++ + L Sbjct: 61 LVKGTIPFVPDIKVQRSLNL 80 >UniRef50_Q2W6H5 Predicted transcriptional regulator n=14 Tax=Alphaproteobacteria RepID=Q2W6H5_MAGSA Length = 167 Score = 91.8 bits (227), Expect = 6e-18, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 56/127 (44%), Gaps = 17/127 (13%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 ++ +G R+R RR L +Q L +A+ ++ V ++ERG + LF LS+VL + Sbjct: 33 DVHVGGRMRLRRTLLGMSQEKLGEAIGLTFQQVQKYERGANRIGASRLFDLSRVLDVPIS 92 Query: 65 WIL----------------FGDEDKQPTPPVEKPVALSPKE-LELLELFNALPESEQDTQ 107 + G + TP +P + +E LEL+ + +PE ++ Sbjct: 93 YFFDDMADQVQAQSPVNIIKGSAEPSETPAGFEPDPMMKRETLELVRAYYRVPEQQRRRI 152 Query: 108 LAEMRAR 114 +++ Sbjct: 153 YDLIKSM 159 >UniRef50_Q03N50 Transcriptional regulator, xre family n=2 Tax=Lactobacillus RepID=Q03N50_LACBA Length = 254 Score = 91.8 bits (227), Expect = 6e-18, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 42/93 (45%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 ++ E I+ R+ TQ +LA+ L ++ +VS WE G + P + L ALS++ S Sbjct: 1 MSFKEDIKTLRRQSNLTQEALAQQLHVTRQTVSTWETGKNMPNLETLHALSQLFNISLEK 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNA 98 +LF +E +++L + Sbjct: 61 LLFNEEITMKKDKDPSLATQIDHDVKLKSRYRR 93 >UniRef50_A1JLW6 Putative DNA-binding protein n=1 Tax=Yersinia enterocolitica subsp. enterocolitica 8081 RepID=A1JLW6_YERE8 Length = 139 Score = 91.8 bits (227), Expect = 7e-18, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 2/122 (1%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 I R+ + LA+ IS + +W + + LS+ S +W+L Sbjct: 12 IAARLYQIMNKTGVNKSGLARICGISPQAAGRWFT-KGSISKDSALKLSEAFGVSLSWLL 70 Query: 68 FGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEELLK 127 + D + +P+ LS ++ ELL LF LPES++D + +R +V+N+++LF ELL+ Sbjct: 71 SDERDSDDC-SIFQPLVLSERQRELLNLFERLPESDKDNHIETLRIKVENYDRLFNELLE 129 Query: 128 AR 129 +R Sbjct: 130 SR 131 >UniRef50_A7B688 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B688_RUMGN Length = 107 Score = 91.8 bits (227), Expect = 7e-18, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 44/110 (40%), Gaps = 6/110 (5%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 ++ R + +Q+ LA L IS +VS +E+G EP L ++ + Q ++L Sbjct: 4 FANILKTLRTDKHLSQQELATRLGISKSAVSMYEQGRREPDFDILNKIADIFQVDADYLL 63 Query: 68 FGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKN 117 PV L +L EL + + + +R++ K Sbjct: 64 GRSSLSHEPEPVTIAAHLDTSDLTQAEL------DDVEKYIQFIRSKRKQ 107 >UniRef50_A7ILE3 Transcriptional regulator, XRE family n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7ILE3_XANP2 Length = 130 Score = 91.8 bits (227), Expect = 7e-18, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 51/115 (44%), Gaps = 4/115 (3%) Query: 2 ETKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQC 61 + ++ IG R++ R +Q +L + L I+ + ++E G + L ++ L+ Sbjct: 9 KELDVVIGFRVKQSRLRSGVSQEALGEHLGITFQQIQKYENGKNRIACSTLVMIADFLKV 68 Query: 62 SPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVK 116 S ++L G E P + A +E ++L + LP + + +RA + Sbjct: 69 SALFLLRGTEKDAGALPQARDTAS----VEAVDLLSQLPPHSKAAAINTIRALHE 119 >UniRef50_C3LHJ4 Prophage LambdaBa02, repressor protein n=12 Tax=Bacillus cereus group RepID=C3LHJ4_BACAC Length = 122 Score = 91.4 bits (226), Expect = 7e-18, Method: Composition-based stats. Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 10/121 (8%) Query: 8 IGERIRYRRKNLKHTQRSLAKALK--------ISHVSVSQWERGDSEPTGKNLFALSKVL 59 +G+RI+ RK TQ +LA +K ++ ++S +E G S P+ + L +S VL Sbjct: 4 LGQRIKLSRKKRGLTQDALALKIKEKMDTETKVTKTTISNYETGYSSPSNETLVIISDVL 63 Query: 60 QCSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFN 119 S ++L +D P + L + EL+++ +P+ +QD L M+A V + Sbjct: 64 NVSVDYLLGRSDD--PELNAVQFTELRKEFNELIDMLEKMPKEKQDMLLDMMKAAVGHNK 121 Query: 120 K 120 K Sbjct: 122 K 122 >UniRef50_C5RHU2 Transcriptional regulator, XRE family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RHU2_CLOCL Length = 296 Score = 91.4 bits (226), Expect = 8e-18, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 55/130 (42%), Gaps = 3/130 (2%) Query: 4 KNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSP 63 N ++ RI+ RKN +TQ+ L+ L I +V+ +E+G P + L ++ + + + Sbjct: 1 MNNSLANRIKDLRKNNGYTQKELSSLLGIGQTTVANYEQGTRIPDTEKLNKMADLFEVTL 60 Query: 64 TWILFGDEDKQPTPPVEKPVAL---SPKELELLELFNALPESEQDTQLAEMRARVKNFNK 120 ++L +E P+ K + S E L L + + L+ +K Sbjct: 61 DYLLGRNEKISPSNKEVKSKTIDLKSANETYLEYLLKGDSKKARKFILSLHEEGIKIDYI 120 Query: 121 LFEELLKARQ 130 F L K + Sbjct: 121 FFNILDKVLK 130 >UniRef50_B9WW72 Transcriptional regulator, XRE family n=1 Tax=Streptococcus suis 89/1591 RepID=B9WW72_STRSU Length = 121 Score = 91.4 bits (226), Expect = 8e-18, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 3/108 (2%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 + ++IR R +Q LA+ L IS +VS+WE G++ P L L+++ S +++ Sbjct: 4 LAQQIRILRTAKNLSQDELAEKLYISRQAVSKWENGEATPDIDKLVQLAEIFGVSLDYLV 63 Query: 68 FGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARV 115 G E ++ ++ E L + P ++ L + + Sbjct: 64 LGKEPEKEIVVEQRGKM---NGWEFLSEESKRPVENKEIFLFILSMAI 108 >UniRef50_Q4V0T2 Possible transcriptional regulator n=2 Tax=Bacillus cereus group RepID=Q4V0T2_BACCZ Length = 143 Score = 91.4 bits (226), Expect = 8e-18, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 36/77 (46%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + G++++ R+ +Q LA + +S SVS+WE G + P+ + LS + + Sbjct: 1 MFFGDKLKKEREKKGWSQEYLATKIHVSRQSVSKWETGKNYPSIGVIIDLSDLFGITIDE 60 Query: 66 ILFGDEDKQPTPPVEKP 82 +L D + + + Sbjct: 61 LLRSDGELKEKIIQDSK 77 >UniRef50_C6D0K8 Transcriptional regulator, XRE family n=2 Tax=Bacillales RepID=C6D0K8_PAESJ Length = 122 Score = 91.4 bits (226), Expect = 8e-18, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 44/117 (37%), Gaps = 9/117 (7%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + IG RI R+ K TQ A L IS ++S +E+ EP + L + + Q + + Sbjct: 1 MNIGNRIAGLREERKWTQEQTASKLGISRAALSHYEKNRREPDTETLAKFADLYQVTIDY 60 Query: 66 ILFGDEDKQPTPPVE---------KPVALSPKELELLELFNALPESEQDTQLAEMRA 113 ++ + Q + ++ L L E +A +RA Sbjct: 61 LVGRTTNTQAALSEDVRNFVDHLELSDEELLEKYNLSVDGRKLTAEETKRFIAFVRA 117 >UniRef50_B9CLW2 Transcriptional regulator, xre family n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CLW2_9ACTN Length = 236 Score = 91.4 bits (226), Expect = 8e-18, Method: Composition-based stats. Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 5/96 (5%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 + IG+ ++ RK TQ LA+ + ++ +VS+WE G + P L LS Sbjct: 1 MDIVKIGKVLQELRKEKGLTQEQLAEQMGVTRRTVSRWETGSNMPDLDILMELSDFYAVD 60 Query: 63 PTWILFGDE-----DKQPTPPVEKPVALSPKELELL 93 IL G+ DK+ + + S E E L Sbjct: 61 LREILCGERTREHMDKELRETILEVADYSNDEKERL 96 >UniRef50_C8ZWK7 DNA binding protein n=4 Tax=Enterococcus RepID=C8ZWK7_ENTGA Length = 172 Score = 91.4 bits (226), Expect = 8e-18, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 1/114 (0%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + + E+++ R+ +Q S+A+ LKIS S+S+WE G P NL LSK+ Q S Sbjct: 1 MALAEQLKLYREKSGLSQASVAEELKISRQSISKWENGRGYPDIDNLVLLSKLYQVSIDE 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFN 119 +L + ++ + V + K+ +L + + + + + + A V +F Sbjct: 61 LLQ-ENEQLKEQIQKNNVEIEDKKKKLSFITQQMSSDKDEGLILLLLAGVSSFI 113 >UniRef50_P69202 Repressor protein C2 n=23 Tax=root RepID=RPC2_BPP22 Length = 216 Score = 91.4 bits (226), Expect = 8e-18, Method: Composition-based stats. Identities = 37/68 (54%), Positives = 49/68 (72%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 +GERIR RRK LK Q +L K + +S+V++SQWER ++EP G+NL ALSK LQCS Sbjct: 1 MNTQLMGERIRARRKKLKIRQAALGKMVGVSNVAISQWERSETEPNGENLLALSKALQCS 60 Query: 63 PTWILFGD 70 P ++L GD Sbjct: 61 PDYLLKGD 68 >UniRef50_B5LPU6 Helix-turn-helix domain protein n=2 Tax=Viruses RepID=B5LPU6_9CAUD Length = 137 Score = 91.4 bits (226), Expect = 8e-18, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 56/115 (48%), Gaps = 2/115 (1%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 K + + ER++ R+ +TQ +++ L ++ ++S +E G +P + L L+ + + S Sbjct: 21 NKIMNLNERLKACREKKGYTQTFISEKLDVNKATLSSYESGRRKPDYETLTKLADIYEVS 80 Query: 63 PTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKN 117 ++L V++ +S + E ++L N L E ++ + +++ + Sbjct: 81 VDYLLGRSI--HQKLTVKETEEISKETNEWMKLINQLSEDNKELFKSTIQSFISK 133 >UniRef50_B6WXX6 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WXX6_9DELT Length = 183 Score = 91.4 bits (226), Expect = 8e-18, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 34/67 (50%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M + +G+ I RRK + TQ LA + +S SV++WE G S P L L VLQ Sbjct: 5 MTEGRIRLGQEILRRRKAMGMTQEELASRMGVSRQSVAKWETGQSSPDIDRLSLLRDVLQ 64 Query: 61 CSPTWIL 67 S ++ Sbjct: 65 TSLDELI 71 >UniRef50_B0K4S0 Transcriptional regulator, XRE family n=12 Tax=Clostridia RepID=B0K4S0_THEPX Length = 137 Score = 91.4 bits (226), Expect = 9e-18, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 5/128 (3%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 +R+R R+ Q+ +AK L I+ + +E+G EP+ + L LS S ++L Sbjct: 10 FSQRLRQLREEKGLLQKDVAKILGITPSAYGYYEQGKREPSMEVLKKLSDFFNVSIDYLL 69 Query: 68 FGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEELLK 127 + + P + + V + ELLE +N L E E L + K + +++++ Sbjct: 70 GRTDIRSPVDEITEAV---SDDPELLEFWNELKEREDLKLL--FKQTKKLSPREIKQIIR 124 Query: 128 ARQRTNKR 135 + + Sbjct: 125 IIKAIEEE 132 >UniRef50_C9L3X9 Toxin-antitoxin system, antitoxin component, Xre family n=2 Tax=Clostridiales RepID=C9L3X9_RUMHA Length = 215 Score = 91.4 bits (226), Expect = 9e-18, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 34/78 (43%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + IGE+I RK +Q A +S +VS WE G S P + + +S + S Sbjct: 1 MNIGEQINNLRKKHGLSQDDFANLFNVSRQTVSNWENGKSYPDLEMIIKISDYFKISVDE 60 Query: 66 ILFGDEDKQPTPPVEKPV 83 +L D + EK V Sbjct: 61 LLRNDVQSEEKIDNEKKV 78 >UniRef50_B0MKM0 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKM0_9FIRM Length = 124 Score = 91.4 bits (226), Expect = 9e-18, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 45/104 (43%) Query: 2 ETKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQC 61 E + + GER++ R + TQ LA+ + ++ ++S +E + P+ + + ++ V Sbjct: 16 EARMVKFGERVKQLRLSAGMTQEQLAERIWVTKAAISNYELSERNPSPETIIKIAGVFGV 75 Query: 62 SPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQD 105 + ++L ++ + T + + L+ + + Sbjct: 76 TTDYLLGLEDKRSRTLDISGLCEEDIRFLQSAAALLKKKNAVKK 119 >UniRef50_B6B2C5 Transcriptional regulator, XRE family n=6 Tax=Rhodobacterales RepID=B6B2C5_9RHOB Length = 135 Score = 91.0 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 57/116 (49%), Gaps = 6/116 (5%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 ++ +G+RIR+RR + TQ+ LA+ + I + ++E G + + L+ +++ L+ + Sbjct: 16 DVHVGKRIRHRRWLVGVTQQRLAETVGIKFQQIQKYETGANRVSASRLWDIAESLEVDVS 75 Query: 65 WILFGDEDKQPTPPVEK-----PVALSPKE-LELLELFNALPESEQDTQLAEMRAR 114 + G +++ + L+ KE L+L+ + A+PE ++ R Sbjct: 76 FFFSGLQNEDAAIGDAESGAVPSDILNDKEALDLVRSYYAIPEEQRRRLFDLARVL 131 >UniRef50_A9IXT1 Transcriptional regulator n=8 Tax=Bartonella RepID=A9IXT1_BART1 Length = 130 Score = 91.0 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 4/114 (3%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 + +IG RIR+RR ++ +Q++L L +S + ++E+G + + L +++ LQ + Sbjct: 17 DTSIGARIRHRRISMGLSQKALGNTLGVSFQQIQKYEKGLNRVSAGCLLEIAQKLQVPIS 76 Query: 65 W----ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRAR 114 + +L D + S KE LL+ F L +Q L + R Sbjct: 77 FFYADLLTTDIATKENLSHCNQDTYSEKEHALLKNFRELQPKKQKAILCLLSER 130 >UniRef50_C2CXS6 Transcription regulator n=1 Tax=Lactobacillus brevis subsp. gravesensis ATCC 27305 RepID=C2CXS6_LACBR Length = 212 Score = 91.0 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 33/63 (52%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 ME ++I E+I+ RK TQ+ LA L +S ++S WE G P K++ LS + Sbjct: 1 MEGVPMSISEKIKQCRKQKNLTQKDLADELHLSRKTISGWENGRGYPDIKSITQLSDIFG 60 Query: 61 CSP 63 S Sbjct: 61 ISV 63 >UniRef50_C0CY08 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CY08_9CLOT Length = 179 Score = 91.0 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 44/104 (42%), Gaps = 4/104 (3%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 ++ E +R RK +Q LA+ L +S +VS+WE+G P + L LS L S Sbjct: 1 MSFAEHLRQIRKEKGLSQEDLAELLDVSRQAVSKWEQGAGYPEVETLLLLSNRLNISLDS 60 Query: 66 ILFGDEDKQP----TPPVEKPVALSPKELELLELFNALPESEQD 105 ++ + ++ + SP E ++ + + + Sbjct: 61 LMATEIAREGGGGRAEVTGTILITSPHENVVVSCYKVISSQKMK 104 >UniRef50_B6FIX0 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B6FIX0_9CLOT Length = 119 Score = 91.0 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 44/107 (41%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + G ++ R+ TQ LA+ L++S +++ +E +P + L L+ S + Sbjct: 1 MNFGNNLKDLRETRNVTQGQLAEYLQVSRPTIAGYETKSRQPDFEKLEKLANYFHVSIDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMR 112 ++ G E P++K + ++ + L + L + Sbjct: 61 LVSGSETTSTDIPLKKEPNEKSLDRDVAMAYQKLSLESKQDVLKYIE 107 >UniRef50_B3GVX0 Putative uncharacterized protein n=1 Tax=Streptococcus phage PH15 RepID=B3GVX0_9CAUD Length = 249 Score = 91.0 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 47/125 (37%), Gaps = 13/125 (10%) Query: 1 METKNLT--IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKV 58 M+ + + IGE+I+ R TQ+ L + IS ++ +E+G P +F L+ Sbjct: 1 MDKEQIAGVIGEKIKQYRLENGWTQQELGSKIGISKNAIGNYEKGIRSPKKDTMFDLANA 60 Query: 59 LQCSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNF 118 S + P + +S + E++N L Q L + ++ Sbjct: 61 FGISIDDLF-------PQIRKDSYTKISTIQ----EIYNELKPPRQAKVLTYAKRQLNEQ 109 Query: 119 NKLFE 123 + Sbjct: 110 KNEED 114 >UniRef50_B4ETH6 Putative phage repressor n=1 Tax=Proteus mirabilis HI4320 RepID=B4ETH6_PROMH Length = 215 Score = 91.0 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 34/90 (37%), Positives = 55/90 (61%), Gaps = 2/90 (2%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + I RI+ RR L TQ +LAK L +S VS+++WE +EP G+NL AL+KVL+ SP W Sbjct: 1 MHI--RIKERRLQLSLTQEALAKMLSVSRVSITKWETRVTEPDGENLQALAKVLEVSPEW 58 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLEL 95 +L+G + + ++ K++ ++ L Sbjct: 59 LLYGGNSSEADALIITRKTVNIKKIPIITL 88 >UniRef50_A8RWL6 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RWL6_9CLOT Length = 185 Score = 91.0 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 43/76 (56%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +T GE++++ RK +Q L++ L +S ++S+WE G+S P +N+ LSK+ S + Sbjct: 1 MTFGEKLKFLRKQKGFSQERLSQQLTVSRQAISKWELGESLPDTENVIQLSKLFSVSIDF 60 Query: 66 ILFGDEDKQPTPPVEK 81 +L + + P + Sbjct: 61 LLNDNICSEADIPAVQ 76 >UniRef50_C5EI29 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EI29_9FIRM Length = 146 Score = 91.0 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 5/125 (4%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M+ + +G RI+ RRK L TQ+ + A IS+ ++S+ ERG+ P+ K L +LSK+LQ Sbjct: 1 MDNIDKMVGIRIKTRRKELNLTQKDVYAATGISNGNLSEIERGNVLPSSKALVSLSKLLQ 60 Query: 61 CSPTWILFGD-----EDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARV 115 S WIL G+ T +E + L+ E ++ + +LP EQ +RA+V Sbjct: 61 TSIDWILTGEASIIDNSSPKTSNIEYSLKLNESEELIIFMLRSLPLEEQLDVKNYLRAKV 120 Query: 116 KNFNK 120 K Sbjct: 121 AKCEK 125 >UniRef50_D2JDW2 Transcriptional regulator, xre family n=1 Tax=Staphylococcus aureus RepID=D2JDW2_STAAU Length = 207 Score = 91.0 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 39/87 (44%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + GE+I+ RK+ + TQ+ + L +S ++S WE + P + L +SK S Sbjct: 1 MNFGEQIKQLRKSNEITQQEMGARLGVSRQAISHWENNRNLPDIEMLIIISKEFDISLDI 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELEL 92 ++ G D +++++ Sbjct: 61 LILGGNDMNNMTEKIIRDGSELRKMKM 87 >UniRef50_C6L9K9 DNA-binding protein n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L9K9_9FIRM Length = 257 Score = 90.6 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 2/108 (1%) Query: 1 METKNLT-IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVL 59 M+ G + +RK K TQ+ LA+ L +S +VS+WERG S P L L++ L Sbjct: 1 MDETGKEQFGRFVAQQRKKKKLTQKELAQKLYVSDKAVSKWERGSSMPDIALLTPLAEAL 60 Query: 60 QCSPTWILFGDE-DKQPTPPVEKPVALSPKELELLELFNALPESEQDT 106 + T +L G E +K + L + + + PE +D Sbjct: 61 GVTVTELLEGKEMEKTEESRMADDSHLEMLLKKAVTITEDTPEMRRDK 108 >UniRef50_C2E445 Transcriptional regulator n=3 Tax=Lactobacillus johnsonii RepID=C2E445_LACJO Length = 161 Score = 90.6 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 33/74 (44%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + E+I+ RK TQ +AK L ++ ++ WE+ + P + + ++K S Sbjct: 1 MDFNEQIKRLRKESNLTQEEMAKKLNVTRQAIFNWEKNRNPPDFEMIILIAKTFGVSLDE 60 Query: 66 ILFGDEDKQPTPPV 79 ++ GD+ Sbjct: 61 LILGDKKMNKIEQT 74 >UniRef50_Q5WGX0 Transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WGX0_BACSK Length = 106 Score = 90.6 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 3/90 (3%) Query: 6 LTI-GERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 +TI ER++ RK + TQ L + + ++ VS+S +E G+ P L L+ V S Sbjct: 1 MTIVPERLKTLRKERQLTQEQLGELINVTKVSISGYENGNRTPDTDTLRRLADVFGVSTD 60 Query: 65 WILFGDEDKQPTPPVEKPVALSPKELELLE 94 ++L ++K + + L+ KE +LL Sbjct: 61 YLLGRSKEKNGSFFYDN--ELTHKEAQLLR 88 >UniRef50_C9AY67 Predicted protein n=4 Tax=Enterococcus RepID=C9AY67_ENTCA Length = 304 Score = 90.6 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 6/111 (5%) Query: 1 METKNL-TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVL 59 M N+ IG++I +RK TQ +LA L +S+ +VS WERG+S P + L L+ +L Sbjct: 1 MSEFNMRKIGQQIAAKRKEKNLTQSNLADQLLVSYQAVSNWERGNSLPDIEKLPQLAAIL 60 Query: 60 QCSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAE 110 S +L +P V+ A + + E+ EL + E + E Sbjct: 61 DLSIDELLG-----KPAAAVQHYQAGTAQPEEIAELAPLIKPQELSALIQE 106 >UniRef50_A8RA35 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=A8RA35_9FIRM Length = 313 Score = 90.6 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 41/103 (39%), Gaps = 1/103 (0%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 + E IR RK +Q +A L + ++S+WE S P L ++K+LQ S +L Sbjct: 20 LNENIRKYRKECGLSQEEMAVKLHVVRQTISKWETNLSVPDADMLVEIAKLLQVSVEQLL 79 Query: 68 FGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAE 110 + E L+ + + ++ L Q L Sbjct: 80 DYSGKDSLSVDTE-LARLNEELAKHIKEERRLQLYHQKRNLIL 121 >UniRef50_D0WI56 Toxin-antitoxin system, antitoxin component, Xre family n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WI56_9ACTN Length = 200 Score = 90.6 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 40/86 (46%) Query: 4 KNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSP 63 + I +R+ R+ +Q +A + +S +VS+WE +S P NL AL+ + + Sbjct: 1 MKIEIAKRLYEYRRASGLSQEQVAAKISVSRQAVSKWECAESSPDTDNLIALAMLYGVTV 60 Query: 64 TWILFGDEDKQPTPPVEKPVALSPKE 89 +LF D +K + + + E Sbjct: 61 DELLFADPEKTAAETTKGTIRTNDAE 86 >UniRef50_A3CPI8 Transcriptional regulator, XRE family, putative n=1 Tax=Streptococcus sanguinis SK36 RepID=A3CPI8_STRSV Length = 197 Score = 90.6 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 24/77 (31%), Positives = 43/77 (55%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + +G++I++ RK +Q LA+ + +S S+S WERG + P +NL LSKV + S Sbjct: 1 MQVGKQIQHYRKEKNLSQDDLAEIIFVSRQSISNWERGATYPDIQNLLLLSKVFEVSLDK 60 Query: 66 ILFGDEDKQPTPPVEKP 82 ++ GD + ++ Sbjct: 61 LVKGDLETMKQIIHDQE 77 >UniRef50_UPI0001C37AAA DNA-binding protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37AAA Length = 190 Score = 90.6 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 33/78 (42%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + +G +I+ R +Q LA+ +S +VS WE S P +L L + S Sbjct: 1 MEVGNQIKKHRTKNGWSQEVLAEKAFVSRQTVSNWENNKSYPDIHSLVLLGNIFNISLDE 60 Query: 66 ILFGDEDKQPTPPVEKPV 83 ++ GD + + V Sbjct: 61 LIKGDVEVMKNEINKNEV 78 >UniRef50_C6JC03 Transcriptional regulator n=9 Tax=Clostridiales RepID=C6JC03_9FIRM Length = 313 Score = 90.6 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 35/82 (42%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 IG ++ RK TQ LA+ +S +VS+WE G + P L L++ Sbjct: 1 MDTKKIGAFLKQCRKEKNLTQEQLAEKFGVSARTVSRWETGINMPDLSILVQLAEYYDVE 60 Query: 63 PTWILFGDEDKQPTPPVEKPVA 84 +L G+ + +++ + Sbjct: 61 MRELLDGERSQTMNKEMKETLD 82 >UniRef50_C2HC66 Transcriptional regulator n=2 Tax=Enterococcus faecium RepID=C2HC66_ENTFC Length = 123 Score = 90.6 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 41/106 (38%), Gaps = 2/106 (1%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 + +RI+ RK TQ LAK + +S ++ WE G +EP + L L+ + S ++L Sbjct: 2 LKDRIKELRKQHGWTQAELAKKMSVSQQTIGSWEVGRAEPNSEALTKLAHLFNVSTDYLL 61 Query: 68 FGDEDKQPTPPVE--KPVALSPKELELLELFNALPESEQDTQLAEM 111 + + + + L + L + + Sbjct: 62 SNHKTPEWATKEDIIELDKLLESNANMAYGGETLTPEQLQRVRDVL 107 >UniRef50_Q73AA1 DNA-binding protein n=4 Tax=Bacillus cereus group RepID=Q73AA1_BACC1 Length = 142 Score = 90.6 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 40/71 (56%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +++GE+++ R++ +Q +AK + ++ ++ +WE S P NL LS++ + Sbjct: 1 MSLGEQLKKLRESKGFSQEDVAKKIGVTRQAIYRWENNKSYPDIDNLILLSEMYNVTLDA 60 Query: 66 ILFGDEDKQPT 76 ++ G+++ + Sbjct: 61 LIKGNQNMKEK 71 >UniRef50_A7B234 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B234_RUMGN Length = 262 Score = 90.6 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 1/115 (0%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + IG +IR+RR L ++ LA ++++ +++ +E G S P L AL L + Sbjct: 1 MKIGNQIRHRRTELNLSRGELANKIQVTPSAIANYENGVSYPKPDILVALMNALDVDANY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNK 120 + + + + V LSP+E E + + L E+ + + K N+ Sbjct: 61 LYWNYLSNSTIQRLYRKV-LSPEEKESILKYRELSENGKSLVRLIIDEEYKRMNQ 114 >UniRef50_B0A9T9 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=B0A9T9_9CLOT Length = 139 Score = 90.2 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 41/91 (45%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 + E ++ RK+ +Q LA L + ++S+WE+G S P L ++ + + S + +L Sbjct: 2 LNENLKQLRKSKGLSQEELAIRLNVVRQTISKWEKGLSVPDADMLIKIADIFEVSVSELL 61 Query: 68 FGDEDKQPTPPVEKPVALSPKELELLELFNA 98 +++ V + E L + N Sbjct: 62 GAKIEEKKEQDVNAVADQLMRVNEQLAIKNR 92 >UniRef50_C0EJ64 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EJ64_9CLOT Length = 122 Score = 90.2 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 61/120 (50%), Gaps = 2/120 (1%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + G++I+ R + Q+ +A+ LK+S S+S +E+ ++P + L+K+ S + Sbjct: 1 MRFGDKIKNLRTDADLKQKEVAEILKVSRSSISSYEQNKNQPDLHAVIELAKLFNVSTDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQ--LAEMRARVKNFNKLFE 123 +L E K + ++ + ++++EL N + + ++ L E+ +KN NK + Sbjct: 61 LLGLSEYKTSWVDETECISTNSDNVKIVELLNDIKKLDKPDVSHLVELINIMKNQNKYLQ 120 >UniRef50_C4F7U4 Putative uncharacterized protein n=2 Tax=Collinsella RepID=C4F7U4_9ACTN Length = 206 Score = 90.2 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 36/65 (55%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + I +I+ RR+ + +Q LA+ L +S ++S WER + P ++L LS + S Sbjct: 1 MDISNQIKTRREAMGLSQEQLAEKLYVSRQTISNWERDKTYPDVQSLLMLSVLFDTSIDT 60 Query: 66 ILFGD 70 ++ GD Sbjct: 61 LVKGD 65 >UniRef50_Q70CB1 Putative transcriptional regulator n=2 Tax=Streptococcus thermophilus RepID=Q70CB1_STRTR Length = 113 Score = 90.2 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 8/119 (6%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + ER++ RK TQ +A+ L IS + + WERG +PT NL ++++L S + Sbjct: 1 MEFSERLKELRKKANFTQVEVAEKLGISQPAYASWERGVKKPTQDNLVRIAQILNVSVDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEE 124 ++ E+K L EL L + E+D E+ ++ K F++ Sbjct: 61 LVGNSEEKAD--------ELDNIELLFRMNSKGLTDEEKDIFRKELIEFMEERKKAFDK 111 >UniRef50_B4WDR6 Helix-turn-helix domain protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WDR6_9CAUL Length = 139 Score = 90.2 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 50/121 (41%), Gaps = 1/121 (0%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 +L +G R+ RR+ L+++Q LA+A ++ + ++ERG + L+ +++ L Sbjct: 18 DLHVGRRVAERRQALRYSQAQLAQAAGVTFQQIQKYERGSNRIAASRLWEIAEFLNVDLN 77 Query: 65 WILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEE 124 + G P A + + E+ L Q L ++ + + E Sbjct: 78 YFFEGLGLP-DGPEARMGGAPTKQTAEIARRAPELSVRNQKLVLDLIQQLARVSAETGAE 136 Query: 125 L 125 + Sbjct: 137 I 137 >UniRef50_A7VII3 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VII3_9CLOT Length = 101 Score = 90.2 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 37/68 (54%) Query: 4 KNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSP 63 + I ERIR R+ + TQ +LA AL IS +V+ W+ G S+P+ L L+ S Sbjct: 1 MVMDISERIRELREVIGITQSNLASALNISRSAVNAWKMGTSKPSIDTLVDLADFFHVST 60 Query: 64 TWILFGDE 71 ++L +E Sbjct: 61 DYLLGRNE 68 >UniRef50_A4ISZ9 Prophage LambdaBa04, DNA-binding protein n=3 Tax=Geobacillus RepID=A4ISZ9_GEOTN Length = 137 Score = 90.2 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 54/131 (41%), Gaps = 2/131 (1%) Query: 4 KNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSP 63 +GE ++ RK + TQ LA+ L +S +S+WE G + P ++L L ++ S Sbjct: 1 MMKKLGEMLKRLRKQQRWTQEQLAEQLNVSRSQISKWENGSTLPDIQSLEKLCRLFNVSA 60 Query: 64 TWILFGDEDKQPTPPVEKPVALSPK--ELELLELFNALPESEQDTQLAEMRARVKNFNKL 121 +++ + ++ K + + + E L + L + + + + K Sbjct: 61 DFLIGSEVQRREVLREVKRLYGTTEMNEKTLTAIDYLLHNQDMSEAMYTLANLPEKKRKH 120 Query: 122 FEELLKARQRT 132 E +L + Sbjct: 121 VETMLITIIKE 131 >UniRef50_C8P9Q6 DNA-binding protein n=2 Tax=Lactobacillus RepID=C8P9Q6_9LACO Length = 112 Score = 89.8 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 44/89 (49%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 +T+G+RI+ R+ + TQ LA+ L +S ++S+WE G + P L +S + + Sbjct: 1 MTLGQRIKEEREKRQWTQDYLAETLNVSRQAISKWEVGSAYPDIDRLVQISNLFDITLDS 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLE 94 ++ GD+ + + + K E + Sbjct: 61 LIKGDDSLKKSIVITKNAKAQTNVWEFMR 89 >UniRef50_A5MYL3 Phage-related protein n=2 Tax=Clostridium kluyveri RepID=A5MYL3_CLOK5 Length = 261 Score = 89.8 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 21/128 (16%), Positives = 63/128 (49%), Gaps = 9/128 (7%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + +G +I+ R++ TQ+ LA+ + ++ V+++++E EP+ + L ++K L + Sbjct: 1 MNVGAKIKEIRESKNLTQKQLAEKIGVTPVTITRYENNKREPSIETLNKIAKALDVTIND 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEEL 125 + G++D +++ ++ +L ++ + + + +KN + +E+ Sbjct: 61 L-AGEKDTVTKKVLKQLISGGVNLEQL--------STDTKIHIDRLNSLLKNDDATCDEI 111 Query: 126 LKARQRTN 133 + + T+ Sbjct: 112 QQIAKYTD 119 >UniRef50_B9MR24 Transcriptional regulator, XRE family n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MR24_ANATD Length = 321 Score = 89.8 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 21/128 (16%), Positives = 44/128 (34%), Gaps = 1/128 (0%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 + R++ R+ TQ LA+ L I ++S +E G +P L ++ S Sbjct: 43 IEENIFAMRLKELREEANLTQNELAEKLGIGRATLSNYELGVRKPDIDTLQKIANYFNVS 102 Query: 63 PTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLF 122 ++L K+ + K+++ L+ F E + + + K Sbjct: 103 SDYLLGMTPIKKRDSLNSIEEIIKEKKVKELKNFFK-HEENVKAYFEYIVSLFEPLLKAI 161 Query: 123 EELLKARQ 130 + Sbjct: 162 SIYEDEKI 169 >UniRef50_D2TX49 Phage transcriptional regulator n=1 Tax=Arsenophonus nasoniae RepID=D2TX49_9ENTR Length = 237 Score = 89.8 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 36/79 (45%), Positives = 52/79 (65%), Gaps = 1/79 (1%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M+T +I RIR RRK L+ TQ +AKAL +S VSV++WE GD++P G+NL L+KVL Sbjct: 15 MKTST-SISNRIRDRRKELRLTQNEIAKALGVSRVSVTKWENGDTKPDGENLHILTKVLA 73 Query: 61 CSPTWILFGDEDKQPTPPV 79 C+ W+L+G + + Sbjct: 74 CNIEWLLYGKDSRSEDDTK 92 >UniRef50_D0I2W5 Hypothetical transcriptional regulator n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I2W5_VIBHO Length = 121 Score = 89.8 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 5/124 (4%) Query: 1 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQ 60 M + +RIR R+ TQ +A+ L ++ + E G +EP +L ++ V Sbjct: 1 MLIVKAHVAQRIREAREYRDITQVEMAQHLDVARQTYLDIESGKTEPKVSSLATIADVTG 60 Query: 61 CSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNK 120 W LFG+ + + LL LF+ LP+S + + + + Sbjct: 61 RPLNWFLFGESTRSDIAFTHR-----DDLNTLLALFSQLPDSARKLVMDQALLLAQYMIN 115 Query: 121 LFEE 124 + Sbjct: 116 MVSR 119 >UniRef50_C8WKX0 Transcriptional regulator, XRE family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WKX0_EGGLE Length = 247 Score = 89.8 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 35/59 (59%) Query: 4 KNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 N+ I +R+ R+ ++Q LA+ L +S +VS+WER +S P NL AL+K+ S Sbjct: 11 MNVEIAQRLAAMRREQGYSQEELAERLGLSRQAVSKWERAESSPDTGNLIALAKLYGVS 69 >UniRef50_C0WXM9 Bacteriophage transcriptional regulator n=2 Tax=Lactobacillus fermentum RepID=C0WXM9_LACFE Length = 115 Score = 89.8 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 50/106 (47%), Gaps = 4/106 (3%) Query: 8 IGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWIL 67 IG RI++ RK +Q L K + +S +V+ WE +EP+ + L+++ + S ++L Sbjct: 14 IGARIKHLRKGRNLSQAMLGKYIGVSQTTVTAWETNRTEPSSTYVTKLAELFEVSTDYLL 73 Query: 68 FGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRA 113 D + + V L+ + + L L +++++ M Sbjct: 74 ----DHERSIRQPVTVDLADENVNLTYRGRPLSKNDRNIIYRLMED 115 >UniRef50_A6LK16 Transcriptional regulator, XRE family n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LK16_THEM4 Length = 244 Score = 89.8 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 34/81 (41%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + +GE+I+ R +Q LAK L IS S+S +E P L ++K+ S + Sbjct: 1 MDLGEKIKQLRLERDISQEQLAKRLGISRESISHYENNRIVPPVHILREIAKIFNVSVNY 60 Query: 66 ILFGDEDKQPTPPVEKPVALS 86 + + + V + Sbjct: 61 FFEEEHYDKNVKGESELVDYN 81 >UniRef50_Q7M7F6 Similar to phage transcriptional repressor n=2 Tax=Enterobacteriaceae RepID=Q7M7F6_PHOLL Length = 111 Score = 89.8 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 5/116 (4%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 +T+G+RI RK+ TQ LA+AL +S +V WE G L ++K+L S Sbjct: 1 MMTLGQRISALRKHAGLTQAQLAQALNVSQQAVQSWEAGRRRIQISVLPEIAKLLSVSLE 60 Query: 65 WILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNK 120 + + D P + + + + +++ + LP ++Q + A + + Sbjct: 61 ELFGEESDTIP-----RKRGPASRLEQQIQIISQLPRAKQKLVSEMLDAVIAQAQQ 111 >UniRef50_C6C7K6 Transcriptional regulator, XRE family n=7 Tax=Proteobacteria RepID=C6C7K6_DICDC Length = 144 Score = 89.8 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 49/119 (41%), Gaps = 5/119 (4%) Query: 2 ETKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQC 61 +T +G+RI RK+ TQ LA+AL +S +V WE G L A+++ L Sbjct: 23 QTFMTELGKRITALRKDAGLTQVQLAQALNVSQQAVQSWESGRRRIQISALPAVARQLSV 82 Query: 62 SPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNK 120 S +L P + + + + +++ LP S Q + A + + Sbjct: 83 SLDALLGDSHTPPP-----RKRGPASRLEQQIQMIGQLPRSRQKLVSEMLDAVIAQAQQ 136 >UniRef50_C5SHB6 Transcriptional regulator, XRE family n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SHB6_9CAUL Length = 125 Score = 89.5 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 ++ +G RIR RRK + +Q LA L ++ V ++ERG + + + ++ L Sbjct: 8 DVHVGHRIRSRRKEIGMSQTDLANHLSLTFQQVQKYERGFNRISASKMHDAARALGVHIE 67 Query: 65 WILFGDEDKQPTPPVEKPVA-----LSPKELELLELFNALPESEQDTQLAEMRARV 115 + G +++ E + L+ + EL F+ L +++ LA +R V Sbjct: 68 YFFEGLDNETELDRSESEASVTQFLLTREGAELSSHFSKLSANQRKGVLALVRMLV 123 >UniRef50_C0EJ65 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EJ65_9CLOT Length = 125 Score = 89.5 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 61/132 (46%), Gaps = 10/132 (7%) Query: 6 LTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTW 65 + I +R++ R + Q+ +A A+ ++ S+S +E G + P + L+K S + Sbjct: 1 MIISQRLKDLRSDADLNQQDVADAVNVTQSSISNYELGVNLPDLDVVIKLAKFFNVSSDY 60 Query: 66 ILFGDEDKQPTPPVEKPVALSPKELELLELFN---ALPESEQDTQLAEMRARVKNFNKLF 122 +L + K ++ + L ++ + + +L +++++ + + + Sbjct: 61 LLGITDVKTSWSDMKDHIILPSGKVPITKFLRDVKSLDTNDRESLIQVLNLAL------- 113 Query: 123 EELLKARQRTNK 134 ++ A+++TNK Sbjct: 114 NQVKYAKKKTNK 125 >UniRef50_C9XPP6 Putative phage regulatory protein n=5 Tax=Clostridium difficile RepID=C9XPP6_CLODC Length = 135 Score = 89.5 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 56/121 (46%), Gaps = 6/121 (4%) Query: 7 TIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWI 66 T+G+RI Y R + K TQR L L ++ ++E GD +P L +++ + W+ Sbjct: 6 TLGKRIAYLRNSKKLTQRKLMDIL--KFENLGKYETGDRKPNCDILMSIADYFNVTTDWL 63 Query: 67 LFGDE----DKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLF 122 L+G E + E + ++ E+ +L L+ L E ++ + ++ + L Sbjct: 64 LYGKEKVNVNSSVKEDKEDYLHVTNDEMMILNLYRQLNERDKIKIEGILELKISEYKDLK 123 Query: 123 E 123 + Sbjct: 124 K 124 >UniRef50_D0DT22 DNA-binding protein n=1 Tax=Lactobacillus fermentum 28-3-CHN RepID=D0DT22_LACFE Length = 204 Score = 89.5 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 42/97 (43%) Query: 3 TKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCS 62 + IG+ I RK TQ +LA+ L+IS ++S+WE G S P + L +L+ + Sbjct: 1 MDQIKIGKFIASCRKERGMTQANLAEKLRISDRAISKWETGKSMPDSGIMLELCDLLKIN 60 Query: 63 PTWILFGDEDKQPTPPVEKPVALSPKELELLELFNAL 99 +L G+ L + E+ E + Sbjct: 61 VNELLSGERIMTEAYDKRAEENLLAMKQEVEEKNRQM 97 >UniRef50_A5I4G6 Putative DNA-binding phage protein n=1 Tax=Clostridium botulinum A str. Hall RepID=A5I4G6_CLOBH Length = 144 Score = 89.5 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 30/129 (23%), Positives = 49/129 (37%) Query: 5 NLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPT 64 TIGERI+ R+ Q L+K L + SVS WE P L ++ CS Sbjct: 1 MKTIGERIKELREEKGINQLELSKILNVHKGSVSNWENNKRTPDADMLTKIADFFNCSVD 60 Query: 65 WILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEE 124 ++L + K + +L+ + ES +T + M L+ E Sbjct: 61 YLLGNTDIKNKLNMSKLFSGAGGLKLDSFKELIEKDESNDNTLFSFMLQDKLKEAGLYNE 120 Query: 125 LLKARQRTN 133 + ++ N Sbjct: 121 NMSNEEKNN 129 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.310 0.162 0.457 Lambda K H 0.267 0.0499 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 864,873,199 Number of Sequences: 3077464 Number of extensions: 40956723 Number of successful extensions: 187885 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 14398 Number of HSP's successfully gapped in prelim test: 3714 Number of HSP's that attempted gapping in prelim test: 168989 Number of HSP's gapped (non-prelim): 18873 length of query: 135 length of database: 1,040,396,356 effective HSP length: 100 effective length of query: 35 effective length of database: 732,649,956 effective search space: 25642748460 effective search space used: 25642748460 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.4 bits) S2: 88 (38.2 bits)