Phyre 2 alignment of P0A6G3 with d2ca1a1

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Job Description | P0A6G3
Confidence | 5.90% | Date | Thu Jan 5 11:03:05 GMT 2012
Rank | 35 | Aligned Residues | 30
% Identity | 23% | Template | d2ca1a1
SCOP info | Nucleocapsid protein dimerization domain | Nucleocapsid protein dimerization domain | Coronavirus nucleocapsid protein
Resolution | 2.6

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | T | A | E | S | C | T | G | G | W | V | A | K | V | I | T | D | I | A | G | S | S | A | W | F | E | R | G | F | V | T
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | N | E | E | G | I | K | D | G | R | V | T | A | M | L | N | L | V | P | S | S | H | A | C | L | F | G | S | R | V | T
Template Known Secondary structure |  |  |  |  | G | G | G | S |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  |  |  |  | S |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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