05/01/2012 21:40:25 : INFO  : Run start: Thu Jan  5 21:40:25 GMT 2012
05/01/2012 21:40:30 : INFO  : Initialised job
05/01/2012 21:40:31 : INFO  : Renaming log file 'phyre2_20120105_214023.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/5f665930ab34ae8b/phyre_20120105_214023.log'
05/01/2012 21:40:32 : INFO  : Initialised job:
Sequence
>batch____
MQEIMQFVGRHPILSIAWIALLVAVLVTTFKSLTSKVKVITRGEATRLINKEDAVVVDLR
QRDDFRKGHIAGSINLLPSEIKANNVGELEKHKDKPVIVVDGSGMQCQEPANALTKAGFA
QVFVLKEGVAGWAGENLPLVRGK

05/01/2012 21:40:33 : INFO  : Checked sequence
05/01/2012 21:40:35 : INFO  : Finding homologues with PSI-BLAST
05/01/2012 21:40:36 : INFO  : PSI-BLAST 3 iterations
05/01/2012 21:41:49 : INFO  : PSI-BLAST 5 iterations
05/01/2012 21:43:39 : INFO  : Finished PSI-BLAST
05/01/2012 21:43:42 : INFO  : Running Buildali to generate a3m file
05/01/2012 21:59:11 : INFO  : Converting to HMM
05/01/2012 21:59:14 : INFO  : Calibrating HMM
05/01/2012 21:59:23 : INFO  : Searching HMM database
05/01/2012 22:02:23 : INFO  : Finished buildali
05/01/2012 22:02:24 : INFO  : Predicting secondary structure
05/01/2012 22:02:32 : INFO  : Predicted secondary structure (PSI-Pred)
05/01/2012 22:02:34 : INFO  : Predicting Disordered regions
05/01/2012 22:02:39 : INFO  : Predicted Disorder (Disopred)
05/01/2012 22:02:41 : INFO  : Running memsat_svm check
05/01/2012 22:04:34 : INFO  : Globular protein
05/01/2012 22:04:35 : INFO  : Predicted Transmembrane (memsat_svm) ID '5f665930ab34ae8b'
05/01/2012 22:04:36 : INFO  : Initialising fold library search
05/01/2012 22:04:39 : INFO  : Initialised search input
05/01/2012 22:04:41 : INFO  : Building Ensemble models
05/01/2012 22:04:44 : INFO  : Building hh.d1yt8a1.model.1.pdb
05/01/2012 22:04:57 : INFO  : Building hh.c3tp9B_.model.2.pdb
05/01/2012 22:05:07 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/5f665930ab34ae8b/hh.c3tp9B_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/5f665930ab34ae8b/c3tp9B_.2.pdb
05/01/2012 22:05:10 : INFO  : Building hh.d1yt8a3.model.3.pdb
05/01/2012 22:05:19 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/5f665930ab34ae8b/hh.d1yt8a3.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/5f665930ab34ae8b/d1yt8a3.3.pdb
05/01/2012 22:05:22 : INFO  : Building hh.c2hhgA_.model.4.pdb
05/01/2012 22:05:30 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/5f665930ab34ae8b/hh.c2hhgA_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/5f665930ab34ae8b/c2hhgA_.4.pdb
05/01/2012 22:05:33 : INFO  : Building hh.c1yt8A_.model.5.pdb
05/01/2012 22:05:41 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/5f665930ab34ae8b/hh.c1yt8A_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/5f665930ab34ae8b/c1yt8A_.5.pdb
05/01/2012 22:05:44 : INFO  : Building hh.d1qxna_.model.6.pdb
05/01/2012 22:05:53 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/5f665930ab34ae8b/hh.d1qxna_.model.6.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/5f665930ab34ae8b/d1qxna_.6.pdb
05/01/2012 22:05:56 : INFO  : Building d1yt8a1.1.pdb
05/01/2012 22:06:07 : INFO  : Building c3tp9B_.2.pdb
05/01/2012 22:06:18 : INFO  : Building d1yt8a3.3.pdb
05/01/2012 22:06:28 : INFO  : Building c2hhgA_.4.pdb
05/01/2012 22:06:37 : INFO  : Building c1yt8A_.5.pdb
05/01/2012 22:06:45 : INFO  : Building d1qxna_.6.pdb
05/01/2012 22:06:54 : INFO  : Building c3ilmD_.7.pdb
05/01/2012 22:07:03 : INFO  : Building c2fsxA_.8.pdb
05/01/2012 22:07:12 : INFO  : Building c3aaxB_.9.pdb
05/01/2012 22:07:22 : INFO  : Building c3gk5A_.10.pdb
05/01/2012 22:07:31 : INFO  : Building c3emeA_.11.pdb
05/01/2012 22:07:40 : INFO  : Building c1e0cA_.12.pdb
05/01/2012 22:07:49 : INFO  : Building c1urhA_.13.pdb
05/01/2012 22:07:58 : INFO  : Building c3nhvE_.14.pdb
05/01/2012 22:08:09 : INFO  : Building d1e0ca1.15.pdb
05/01/2012 22:08:19 : INFO  : Building c3k9rA_.16.pdb
05/01/2012 22:08:29 : INFO  : Building d1tq1a_.17.pdb
05/01/2012 22:08:38 : INFO  : Building d1gmxa_.18.pdb
05/01/2012 22:08:46 : INFO  : Building d1t3ka_.19.pdb
05/01/2012 22:08:55 : INFO  : Building c3hzuA_.20.pdb
05/01/2012 22:10:03 : INFO  : Finished HH model building
05/01/2012 22:10:04 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
05/01/2012 22:10:54 : INFO  : html domain output complete ID '5f665930ab34ae8b'
05/01/2012 22:26:33 : INFO  : Run end  : Thu Jan  5 22:26:33 GMT 2012
