Phyre 2 alignment of P64508 with c3d8mA_

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Job Description | P64508
Confidence | 1.58% | Date | Thu Jan 5 12:09:02 GMT 2012
Rank | 36 | Aligned Residues | 23
% Identity | 30% | Template | c3d8mA_
PDB info | PDB header:virus/viral protein | Chain: A: PDB Molecule:baseplate protein, receptor binding protein; | PDBTitle: crystal structure of a chimeric receptor binding protein from2 lactococcal phages subspecies tp901-1 and p2
Resolution | 3.35 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 12 | . | . | . |  | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | K | H | V | D | . | V | E | Y | R | F | S | A | E | P | Y | I | G | A | S | C | S | N | V | S
Query Conservation |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | N | N | D | L | V | I | V | R | F | F | G | S | V | S | N | I | Q | K | G | W | N | M | S
Template Known Secondary structure |  |  | T | T | T |  |  |  |  |  |  |  |  |  |  |  | S | B |  | T | T |  | B |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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