12 c1itkB_ Probab=35.02   E-value=25  Score=16.55  Aligned_columns=159  Identities=15%

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHCCC--------HHHHH-------CCCCCC-CCCCCCEEHHHHHHHHHHCCCCCCC
Q ss_conf             1899999853389899999999975010--------34542-------136854-4677500115777763213888874
Q batch____       133 SYSERLDSVRTEKQLSAIFDDLINMVPM--------GQTLF-------GSLNPV-RTGGPMQVSIAFAEQHTKGYPWKMD  196 (364)
Q Consensus       133 sy~eridalkTErel~~ly~dmi~~~p~--------g~~l~-------~~~nPv-~TgGpMQVsV~fAe~h~r~~~~~~~  196 (364)
                      .|.+....|-.|---.+|++=|..--++        |+.+.       +.|+-. .|||+..=|+.|+.|  ..+|.+.+
T Consensus        34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~p~~vRlAwH~aGTy~~~~~~GG~~~gsirf~pe--~~~p~N~g  111 (714)
T c1itkB_          34 DYAEEFQKLDLEAVKSDLEELMTSSQDWWPADYGHYGPLFIRMAWHSAGTYRTADGRGGAAGGRQRFAPI--NSWPDNAN  111 (714)
T ss_dssp             CHHHHHHHSCHHHHHHHHHHHHTCCBTTBCCGGGCCHHHHHHHHHHHHTTCCTTTCCSSSTTCGGGSTTG--GGCGGGTT
T ss_pred             HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH--HCCCCCCC
T ss_conf             1789986502999999999986278777843222203477865542354411679985887740126467--17866456


Q ss_pred             -CHHHH---HHHHCCCC-HHHHHHHHHCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHH----HCCCCCCCCCCE---
Q ss_conf             -21677---76523670-5676898757787633210000024556201220799999998----609842768766---
Q batch____       197 -GTVRQ---EVFSRRGG-LWFGTYHLLNYPASYSAPIYRFADFNAGWYASRNAAFQNAVSK----ASGVKLALDGDL---  264 (364)
Q Consensus       197 -~~lR~---~vftr~GG-vyfG~a~LL~Ypa~Y~~~~YRFADfNAG~YsSRNAAFQ~~l~r----lsg~~l~~DGDL---  264 (364)
                       ..-|+   .+...+|. |=|+--+.|-=-.....+=--.-.|-.||--+-...-....+.    .++.+-+.+|.|   
T Consensus       112 L~~A~~~L~piK~k~~~~VS~ADLi~LAg~vAIe~~GGP~i~~~~GR~D~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  191 (714)
T c1itkB_         112 LDKARRLLLPIKQKYGQKISWADLMILAGNVAIESMGFKTFGYAGGREDAFEEDKAVNWGPEDEFETQERFDEPGEIQEG  191 (714)
T ss_dssp             HHHHHHHTHHHHHHHGGGSCHHHHHHHHHHHHHHHTTCCCSCCCBCCCCCSSCCTTCCCCSCSSTTCCCSCSSTTCCCTT
T ss_pred             HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             79999999999988288767999999999999997299630346886665563322235665444455566765432100


Q ss_pred             -------EEEECCC-------CCHHHHHHHHHHHHCCCCHHHH
Q ss_conf             -------7841888-------6378999999876549998999
Q batch____       265 -------IRYDSKE-------PGKTELATRKLAAKLGMSDSEI  293 (364)
Q Consensus       265 -------l~Y~~g~-------~s~te~A~~~~~~~l~lse~qi  293 (364)
                             ++|-+-|       |+.+...++..|.+.||+++|+
T Consensus       192 ~~~~~~g~~yv~peg~~~~Pdp~~sa~~lr~~F~rmGfnd~E~  234 (714)
T c1itkB_         192 LGASVMGLIYVNPEGPDGNPDPEASAKNIRQTFDRMAMNDKET  234 (714)
T ss_dssp             CSCSSTTCSSSCTTCGGGCCCHHHHHHHHHHHHHTTTCCHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHH
T ss_conf             0012233333576767679885569899999999769988787