54 c3dm5A_ Probab=99.12   E-value=6.4e-09  Score=74.75  Aligned_columns=170  Identities=13%

Q ss_pred             EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             69999708888988899999999999889949998572013456675433035531014788631123210123334677
Q batch____         3 RIIMLIPTGTSVGLTSVSLGVIRAMERKGVRLSVFKPIAQPRTGGDAPDQTTTIVRANSSTTTAAEPLKMSYVEGLLSSN   82 (714)
Q Consensus         3 R~I~ItSt~~gvGKTtVslgLA~aLa~~G~kV~~~KP~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~   82 (714)
                      ++|++++.. |+||||++..||..+.++|.||+++-.|.+.+...+-.......+.                 -+.....
T Consensus       101 ~vI~~vG~~-G~GKTTT~aKLA~~~~~~g~kv~li~aDt~R~aA~eQL~~~a~~~~-----------------vp~~~~~  162 (416)
T c3dm5A_         101 TILLMVGIQ-GSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPGAYHQLRQLLDRYH-----------------IEVFGNP  162 (416)
T ss_dssp             EEEEEECCT-TSSHHHHHHHHHHHHHTTTCCEEEEECCCSSTHHHHHHHHHHGGGT-----------------CEEECCT
T ss_pred             EEEEEECCC-CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHC-----------------CCEEECC
T ss_conf             499997058-8773468999999999569918999618867016999999988609-----------------9158548


Q ss_pred             CCCHHHHHHHHHHHHHHH-CCCEEEEECCCCCCCCCCCCCCCHHHHHHCCCC-EEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             641008999999999985-598999947888676541124508999970998-899930888899999999999998765
Q batch____        83 QKDVLMEEIVANYHANTK-DAEVVLVEGLVPTRKHQFAQSLNYEIAKTLNAE-IVFVMSQGTDTPEQLKERIELTRNSFG  160 (714)
Q Consensus        83 ~~~~l~e~I~~~~~~l~~-~~DvVIIEG~~~~~~~~~~~~~na~IA~~L~a~-VILVv~~~~~s~~~~~~~i~~~~~~l~  160 (714)
                      ......+-+.+.++..+. +||+||||.+|..........--..+....... ++||.++..+  .+..+.+..-.+.+ 
T Consensus       163 ~~~d~~~i~~~ai~~~~~~~~DvIlIDTaGR~~~d~~lm~EL~~i~~~~~p~~vllV~dA~~g--q~a~~~a~~F~~~i-  239 (416)
T c3dm5A_         163 QEKDAIKLAKEGVDYFKSKGVDIIIVDTAGRHKEDKALIEEMKQISNVIHPHEVILVIDGTIG--QQAYNQALAFKEAT-  239 (416)
T ss_dssp             TCCCHHHHHHHHHHHHHHTTCSEEEEECCCCSSCCHHHHHHHHHHHHHHCCSEEEEEEEGGGG--GGHHHHHHHHHHSC-
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCC--HHHHHHHHHHHHCC-
T ss_conf             857889999999999996799899981888879988999999999841484219998226787--88999999997308-


Q ss_pred             HCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCEEEE
Q ss_conf             428980899997279987014554235554203432222111110444676369978999
Q batch____       161 GAKNTNITGVIVNKLNAPVDEQGRTRPDLSEIFDDSSKAKVNNVDPAKLQESSPLPVLGA  220 (714)
Q Consensus       161 ~~~g~~IlGVViNkV~~~~~e~~~~~~~l~e~~~~~~~~~~~~~~~~~~l~~~gipvLG~  220 (714)
                           ++-|+|++|++....-.+                      ........+.|+..+
T Consensus       240 -----~i~gvIlTKlD~~argG~----------------------aLs~~~~t~~PI~fi  272 (416)
T c3dm5A_         240 -----PIGSIIVTKLDGSAKGGG----------------------ALSAVAATGAPIKFI  272 (416)
T ss_dssp             -----TTEEEEEECCSSCSSHHH----------------------HHHHHHTTCCCEEEE
T ss_pred             -----CCCEEEEECCCCCCCHHH----------------------HHHHHHHHCCCEEEE
T ss_conf             -----997699972456772679----------------------999999847988999