56 c1vmaA_ Probab=99.09   E-value=2e-09  Score=77.88  Aligned_columns=195  Identities=16%

Q ss_pred             EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             69999708888988899999999999889949998572013456675433035531014788631123210123334677
Q batch____         3 RIIMLIPTGTSVGLTSVSLGVIRAMERKGVRLSVFKPIAQPRTGGDAPDQTTTIVRANSSTTTAAEPLKMSYVEGLLSSN   82 (714)
Q Consensus         3 R~I~ItSt~~gvGKTtVslgLA~aLa~~G~kV~~~KP~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~   82 (714)
                      +++++++. +|+||||++..||..++++|.||+++..|.+..             .....+..+.+.++..+........
T Consensus        93 ~vi~~~Gp-~G~GKTTt~aklA~~~~~~g~~v~li~~D~~R~-------------gA~eQL~~~a~~~~v~~~~~~~~~~  158 (294)
T c1vmaA_          93 FVIMVVGV-NGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRA-------------AAIEQLKIWGERVGATVISHSEGAD  158 (294)
T ss_dssp             EEEEEECC-TTSSHHHHHHHHHHHHHHTTCCEEEEEECTTCH-------------HHHHHHHHHHHHHTCEEECCSTTCC
T ss_pred             EEEEEEEC-CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCH-------------HHHHHHHHHHHHHCCEEEECCCCCC
T ss_conf             69999806-887602489999999996799489997587686-------------4799999999761982897488369


Q ss_pred             CCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHCC-------CCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf             6410089999999999855989999478886765411245089999709-------988999308888999999999999
Q batch____        83 QKDVLMEEIVANYHANTKDAEVVLVEGLVPTRKHQFAQSLNYEIAKTLN-------AEIVFVMSQGTDTPEQLKERIELT  155 (714)
Q Consensus        83 ~~~~l~e~I~~~~~~l~~~~DvVIIEG~~~~~~~~~~~~~na~IA~~L~-------a~VILVv~~~~~s~~~~~~~i~~~  155 (714)
                      ....+.+.+...-.   ++||+||||.+|........-.--..+.....       +.++||.++  ++-.+..+.+...
T Consensus       159 ~~~~~~~~~~~~~~---~~~d~IlIDTaGr~~~d~~~~~el~~~~~~~~~~~~~~p~~~~LVl~a--~~~~~~~~~~~~~  233 (294)
T c1vmaA_         159 PAAVAFDAVAHALA---RNKDVVIIDTAGRLHTKKNLMEELRKVHRVVKKKIPDAPHETLLVIDA--TTGQNGLVQAKIF  233 (294)
T ss_dssp             HHHHHHHHHHHHHH---TTCSEEEEEECCCCSCHHHHHHHHHHHHHHGGGTCTTCCSEEEEEEEG--GGHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH---CCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC--CCCHHHHHHHHHH
T ss_conf             89999999999997---799899981888987857999999999999630356688539998114--6878999999999


Q ss_pred             HHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCHHHCCCCHHHH
Q ss_conf             98765428980899997279987014554235554203432222111110444676369978999348802255508999
Q batch____       156 RNSFGGAKNTNITGVIVNKLNAPVDEQGRTRPDLSEIFDDSSKAKVNNVDPAKLQESSPLPVLGAVPWSFDLIATRAIDM  235 (714)
Q Consensus       156 ~~~l~~~~g~~IlGVViNkV~~~~~e~~~~~~~l~e~~~~~~~~~~~~~~~~~~l~~~gipvLG~IP~d~~L~~p~v~dl  235 (714)
                      .+.+      ++-|+|++|++                    +....+...-.......++-.+|.=+.-++|...+...+
T Consensus       234 ~~~~------~~~~iIlTKlD--------------------e~~~~G~~l~~~~~~~~Pi~~i~~Gq~v~Dl~~~~~~~l  287 (294)
T c1vmaA_         234 KEAV------NVTGIILTKLD--------------------GTAKGGITLAIARELGIPIKFIGVGEKAEDLRPFDPEAF  287 (294)
T ss_dssp             HHHS------CCCEEEEECGG--------------------GCSCTTHHHHHHHHHCCCEEEEECSSSGGGEEECCHHHH
T ss_pred             HHCC------CCCEEEEECCC--------------------CCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHH
T ss_conf             6308------99769997444--------------------788557999999985798899965998455453788999


Q ss_pred             HHHHCCE
Q ss_conf             9860976
Q batch____       236 ARHLNAT  242 (714)
Q Consensus       236 a~~L~a~  242 (714)
                      ++.|=++
T Consensus       288 ~~~lL~e  294 (294)
T c1vmaA_         288 VEVLLSE  294 (294)
T ss_dssp             HHHHTCC
T ss_pred             HHHHHCC
T ss_conf             9976089