91 c1nijA_ Probab=96.70   E-value=0.018  Score=34.03  Aligned_columns=153  Identities=9%

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99970888898889999999999988994999857201345667543303553101478863112321012333467764
Q batch____         5 IMLIPTGTSVGLTSVSLGVIRAMERKGVRLSVFKPIAQPRTGGDAPDQTTTIVRANSSTTTAAEPLKMSYVEGLLSSNQK   84 (714)
Q Consensus         5 I~ItSt~~gvGKTtVslgLA~aLa~~G~kV~~~KP~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~   84 (714)
                      |.|.+.=-|+||||+.-.|++.  .+|.|++++-      ........+..++............-..+...    ..+.
T Consensus         5 v~iitGfLGaGKTTll~~ll~~--~~~~~~avi~------Nefg~~~iD~~ll~~~~~~v~~l~~GCiCC~~----~~~~   72 (317)
T c1nijA_           5 VTLLTGFLGAGKTTLLRHILNE--QHGYKIAVIE------NEFGEVSVDDQLIGDRATQIKTLTNGCICCSR----SNEL   72 (317)
T ss_dssp             EEEEEESSSSSCHHHHHHHHHS--CCCCCEEEEC------SSCCSCCEEEEEECTTSCEEEEETTSCEEECT----TSCH
T ss_pred             EEEECCCCCCCHHHHHHHHHHC--CCCCEEEEEE------ECCCCCCHHHHHHHHCCCEEEEECCCCEECCC----HHHH
T ss_conf             8998089888988999999842--6997389997------16644420588984079729997799542132----4778


Q ss_pred             CHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCH--HHHHHCC-CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             1008999999999985598999947888676541124508--9999709-988999308888999999999999987654
Q batch____        85 DVLMEEIVANYHANTKDAEVVLVEGLVPTRKHQFAQSLNY--EIAKTLN-AEIVFVMSQGTDTPEQLKERIELTRNSFGG  161 (714)
Q Consensus        85 ~~l~e~I~~~~~~l~~~~DvVIIEG~~~~~~~~~~~~~na--~IA~~L~-a~VILVv~~~~~s~~~~~~~i~~~~~~l~~  161 (714)
                      ...+.++.+....-+..+|+++||.+|..+-.++......  .+...+. ..++-|+++.  ...+..+......+.+. 
T Consensus        73 ~~~l~~l~~~~~~~~~~~d~i~IE~sG~a~p~~i~~~l~~~~~l~~~~~l~~vi~vvD~~--~~~~~~~~~~~~~~Qi~-  149 (317)
T c1nijA_          73 EDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEVLCQRYLLDGVIALVDAV--HADEQMNQFTIAQSQVG-  149 (317)
T ss_dssp             HHHHHHHHHHHHHTSCCCSEEEEEEETTCCHHHHHHHHHHSHHHHHHEEEEEEEEEEETT--THHHHHHHCHHHHHHHH-
T ss_pred             HHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEEEEEEECH--HHHHHHHHHHHHHHHHH-
T ss_conf             999999998412554686689980887579899998863082011308980178997402--67776632255644531-


Q ss_pred             CCCCEEEEEEEECCC
Q ss_conf             289808999972799
Q batch____       162 AKNTNITGVIVNKLN  176 (714)
Q Consensus       162 ~~g~~IlGVViNkV~  176 (714)
                        .+.+  +|+||++
T Consensus       150 --~Ad~--ivlnk~D  160 (317)
T c1nijA_         150 --YADR--ILLTKTD  160 (317)
T ss_dssp             --TCSE--EEEECTT
T ss_pred             --HCCE--EEEECCC
T ss_conf             --0778--9960556