BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (282 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_C7MQM6 Transcriptional regulator, RpiR family n=5 Tax=A... 311 1e-83 UniRef50_Q8R7I8 Transcriptional regulator n=3 Tax=Firmicutes Rep... 310 4e-83 UniRef50_C6WFA6 Transcriptional regulator, RpiR family n=2 Tax=A... 308 2e-82 UniRef50_UPI0001788119 transcriptional regulator, RpiR family n=... 304 2e-81 UniRef50_A4F6M8 RpiR-family transcriptional regulator n=7 Tax=Ac... 304 3e-81 UniRef50_C0ZD50 Transcriptional regulator n=32 Tax=Bacillales Re... 301 3e-80 UniRef50_Q8RD36 Uncharacterized HTH-type transcriptional regulat... 296 4e-79 UniRef50_A1HSQ6 Transcriptional regulator, RpiR family n=1 Tax=T... 296 5e-79 UniRef50_B8E0M8 Transcriptional regulator, RpiR family n=2 Tax=D... 293 4e-78 UniRef50_UPI000196C77F hypothetical protein CATMIT_02718 n=1 Tax... 293 5e-78 UniRef50_C6Q8T9 Transcriptional regulator, RpiR family n=1 Tax=T... 292 1e-77 UniRef50_C4L752 Transcriptional regulator, RpiR family n=4 Tax=B... 290 3e-77 UniRef50_D2AR91 Putative transcriptional regulator, RpiR family ... 290 4e-77 UniRef50_A8S9N1 Putative uncharacterized protein n=3 Tax=Bacteri... 289 5e-77 UniRef50_Q97MK5 Uncharacterized HTH-type transcriptional regulat... 289 6e-77 UniRef50_C6J1X3 RpiR family transcriptional regulator n=2 Tax=Ba... 289 8e-77 UniRef50_A8FJ30 Possible RpiR family transcriptional regulator n... 287 3e-76 UniRef50_C0ZJF9 Transcriptional regulator n=1 Tax=Brevibacillus ... 286 4e-76 UniRef50_C6D7K6 Transcriptional regulator, RpiR family n=1 Tax=P... 286 6e-76 UniRef50_C6J4B4 Transcriptional regulator n=1 Tax=Paenibacillus ... 286 7e-76 UniRef50_A7GD47 Transcriptional regulator, RpiR family n=10 Tax=... 284 3e-75 UniRef50_A9KIQ0 Transcriptional regulator, RpiR family n=1 Tax=C... 283 7e-75 UniRef50_C5CIM2 Transcriptional regulator, RpiR family n=1 Tax=K... 282 1e-74 UniRef50_C2D8M2 Possible transcriptional regulator n=1 Tax=Atopo... 281 1e-74 UniRef50_A8LV24 Transcriptional regulator, RpiR family n=7 Tax=A... 281 2e-74 UniRef50_UPI0001693BD8 YbbH n=1 Tax=Paenibacillus larvae subsp. ... 281 2e-74 UniRef50_B5I8T9 Sugar isomerase n=1 Tax=Streptomyces sviceus ATC... 281 2e-74 UniRef50_C6XNZ1 Transcriptional regulator, RpiR family n=1 Tax=H... 281 2e-74 UniRef50_C0Z7S3 Transcriptional regulator n=1 Tax=Brevibacillus ... 281 3e-74 UniRef50_P44540 Uncharacterized HTH-type transcriptional regulat... 280 3e-74 UniRef50_C0CSK7 Putative uncharacterized protein n=1 Tax=Blautia... 280 3e-74 UniRef50_C5C2G7 Transcriptional regulator, RpiR family n=1 Tax=B... 279 9e-74 UniRef50_B2TJ91 Transcriptional regulator, RpiR family n=1 Tax=C... 279 1e-73 UniRef50_C4G9W4 Putative uncharacterized protein n=1 Tax=Shuttle... 279 1e-73 UniRef50_B6ITC5 HTH-type transcriptional regulator hexR, putativ... 278 1e-73 UniRef50_A8RRF4 Putative uncharacterized protein n=5 Tax=Clostri... 278 2e-73 UniRef50_Q4LA29 Similar to transcriptional regulator n=1 Tax=Sta... 278 2e-73 UniRef50_C4V1J5 RpiR family transcriptional regulator n=1 Tax=Se... 277 3e-73 UniRef50_B4EZY5 RpiR-family transcriptional regulator n=54 Tax=G... 277 4e-73 UniRef50_Q1LPJ6 Transcriptional regulator, RpiR family n=6 Tax=B... 276 4e-73 UniRef50_A8RI47 Putative uncharacterized protein n=1 Tax=Clostri... 276 8e-73 UniRef50_A6LRF3 Transcriptional regulator, RpiR family n=2 Tax=B... 275 1e-72 UniRef50_C1PDB4 Transcriptional regulator, RpiR family n=1 Tax=B... 275 1e-72 UniRef50_UPI0001789683 transcriptional regulator, RpiR family n=... 274 2e-72 UniRef50_C2L140 RpiR family transcriptional regulator n=6 Tax=Cl... 274 3e-72 UniRef50_Q1QSE2 Transcriptional regulator, RpiR family n=28 Tax=... 273 3e-72 UniRef50_B1YJ20 Transcriptional regulator, RpiR family n=1 Tax=E... 273 4e-72 UniRef50_A4TMJ1 RpiR-family transcriptional regulatory protein n... 273 4e-72 UniRef50_C4FUK3 Putative uncharacterized protein n=1 Tax=Catonel... 273 6e-72 UniRef50_B0N1V0 Putative uncharacterized protein n=2 Tax=Bacteri... 273 6e-72 UniRef50_C0D6A5 Putative uncharacterized protein n=1 Tax=Clostri... 272 8e-72 UniRef50_Q45581 Uncharacterized HTH-type transcriptional regulat... 272 8e-72 UniRef50_C6L9A2 Transcriptional regulator, RpiR family n=1 Tax=B... 272 1e-71 UniRef50_C8W838 Transcriptional regulator, RpiR family n=1 Tax=A... 271 1e-71 UniRef50_A9KMQ5 Transcriptional regulator, RpiR family n=1 Tax=C... 271 3e-71 UniRef50_A0KFB6 Transcriptional regulator, RpiR family n=3 Tax=G... 271 3e-71 UniRef50_C3WE65 Transcriptional regulator n=5 Tax=Fusobacterium ... 270 3e-71 UniRef50_A6LVH8 Transcriptional regulator, RpiR family n=8 Tax=F... 270 4e-71 UniRef50_C9AZQ1 Phosphosugar isomerase transcriptional regulator... 270 4e-71 UniRef50_A6LUR0 Transcriptional regulator, RpiR family n=2 Tax=C... 270 4e-71 UniRef50_D1ALE3 Transcriptional regulator, RpiR family n=1 Tax=S... 269 5e-71 UniRef50_A7VQA6 Putative uncharacterized protein n=1 Tax=Clostri... 269 6e-71 UniRef50_A5L3V2 Transcriptional regulator, RpiR family protein n... 269 7e-71 UniRef50_D1YCB1 Transcriptional regulator, RpiR family n=3 Tax=P... 269 8e-71 UniRef50_A8RWE9 Putative uncharacterized protein n=1 Tax=Clostri... 268 2e-70 UniRef50_B6GA31 Putative uncharacterized protein n=1 Tax=Collins... 267 3e-70 UniRef50_C4DDH7 Transcriptional regulator, RpiR family n=1 Tax=S... 266 4e-70 UniRef50_A8FIY5 Possible RpiR family transcriptional regulator n... 266 6e-70 UniRef50_C3RKW6 Sugar isomerase n=3 Tax=Bacteria RepID=C3RKW6_9MOLU 266 6e-70 UniRef50_C8NZR0 RpiR family transcriptional regulator n=1 Tax=Er... 266 6e-70 UniRef50_P46118 HTH-type transcriptional regulator hexR n=302 Ta... 265 1e-69 UniRef50_Q2G836 Transcriptional regulator, RpiR family n=4 Tax=P... 263 4e-69 UniRef50_UPI000197C448 transcriptional regulator n=1 Tax=Provide... 263 4e-69 UniRef50_D0W145 Transcriptional regulator HexR n=3 Tax=Neisseria... 263 4e-69 UniRef50_A9M040 RpiR/YebK/YfhH family transcriptional regulator ... 263 5e-69 UniRef50_Q184N2 Putative phosphosugar-binding transcriptional re... 263 8e-69 UniRef50_Q3JNN8 Transcriptional regulator, RpiR family n=54 Tax=... 262 8e-69 UniRef50_A8F3D9 Transcriptional regulator, RpiR family n=1 Tax=T... 262 1e-68 UniRef50_P37767 Uncharacterized HTH-type transcriptional regulat... 262 1e-68 UniRef50_B9K581 Transcriptional repressor of rpiB expression; tr... 262 1e-68 UniRef50_D1AUV3 Transcriptional regulator, RpiR family n=5 Tax=B... 261 1e-68 UniRef50_A4EAC5 Putative uncharacterized protein n=2 Tax=Collins... 261 2e-68 UniRef50_A1AYM0 Transcriptional regulator, RpiR family n=3 Tax=P... 261 2e-68 UniRef50_C4KZ09 Transcriptional regulator, RpiR family n=85 Tax=... 261 3e-68 UniRef50_UPI000196C511 hypothetical protein CATMIT_02677 n=1 Tax... 260 3e-68 UniRef50_Q04DU1 Transcriptional regulator n=2 Tax=Oenococcus oen... 260 4e-68 UniRef50_C3RM33 Sugar isomerase n=2 Tax=Bacteria RepID=C3RM33_9MOLU 260 4e-68 UniRef50_C2D9S0 RpiR family transcriptional regulator n=1 Tax=At... 260 5e-68 UniRef50_A9BXM8 Transcriptional regulator, RpiR family n=16 Tax=... 259 5e-68 UniRef50_C1I531 Transcriptional regulator n=1 Tax=Clostridium sp... 259 6e-68 UniRef50_C2D3P4 RpiR family transcriptional regulator (Fragment)... 259 9e-68 UniRef50_B8KWX3 Bifunctional protein glk n=3 Tax=unclassified Ga... 259 9e-68 UniRef50_A4VXR0 Transcriptional regulator n=5 Tax=Streptococcus ... 258 1e-67 UniRef50_A0AJB4 Complete genome n=7 Tax=Bacillales RepID=A0AJB4_... 258 1e-67 UniRef50_C1XRD4 Transcriptional regulator n=1 Tax=Meiothermus si... 258 2e-67 UniRef50_A6UCC0 Transcriptional regulator, RpiR family n=4 Tax=P... 257 3e-67 UniRef50_P26833 Uncharacterized HTH-type transcriptional regulat... 257 4e-67 UniRef50_Q02VU4 Transcriptional regulator n=4 Tax=Lactococcus la... 256 5e-67 UniRef50_C5CG85 Transcriptional regulator, RpiR family n=1 Tax=K... 256 6e-67 UniRef50_C0D4M2 Putative uncharacterized protein n=1 Tax=Clostri... 256 8e-67 UniRef50_Q38YX9 Gluconate operon transcriptional regulator, RpiR... 255 1e-66 UniRef50_C2C2H3 Bifunctional RpiR family transcriptional regulat... 254 2e-66 UniRef50_C8NHI8 Probable transcriptional regulator YbbH n=1 Tax=... 254 2e-66 UniRef50_Q9CKN4 Putative uncharacterized protein n=1 Tax=Pasteur... 254 2e-66 UniRef50_D0GPL3 Transcriptional regulator, RpiR family n=1 Tax=L... 254 2e-66 UniRef50_C3JIB3 RpiR-family transcriptional regulator n=2 Tax=Rh... 254 2e-66 UniRef50_Q9K6Z8 Transcriptional regulator (Hex regulon repressor... 254 2e-66 UniRef50_A5EB66 Transcriptional regulator, RpiR family n=1 Tax=B... 254 3e-66 UniRef50_Q13K65 Transcriptional regulator, RpiR family n=7 Tax=B... 254 4e-66 UniRef50_A8SDH7 Putative uncharacterized protein n=1 Tax=Faecali... 253 4e-66 UniRef50_A9MIE1 HTH-type transcriptional regulator murR n=48 Tax... 253 4e-66 UniRef50_A9NEV7 Transcriptional regulator, RpiR family n=1 Tax=A... 253 5e-66 UniRef50_C6JFM8 Transcriptional regulator n=2 Tax=Clostridiales ... 253 5e-66 UniRef50_B7GUA9 Transcriptional regulator, RpiR family n=7 Tax=B... 253 5e-66 UniRef50_C4L7F8 Transcriptional regulator, RpiR family n=2 Tax=G... 252 7e-66 UniRef50_C2D9G3 RpiR family transcriptional regulator n=1 Tax=At... 252 1e-65 UniRef50_Q9WYG1 Uncharacterized HTH-type transcriptional regulat... 252 1e-65 UniRef50_C0CU66 Putative uncharacterized protein n=2 Tax=Clostri... 252 1e-65 UniRef50_Q7MD38 Transcriptional regulator n=31 Tax=Gammaproteoba... 251 2e-65 UniRef50_D2PUN7 Transcriptional regulator, RpiR family n=1 Tax=K... 251 2e-65 UniRef50_A0JVW9 Transcriptional regulator, RpiR family n=2 Tax=A... 251 2e-65 UniRef50_C2JLW7 Bifunctional RpiR family transcriptional regulat... 251 3e-65 UniRef50_Q03Q61 Transcriptional regulator n=1 Tax=Lactobacillus ... 250 3e-65 UniRef50_A9BH25 Transcriptional regulator, RpiR family n=1 Tax=P... 250 4e-65 UniRef50_D1AG49 Transcriptional regulator, RpiR family n=1 Tax=S... 250 4e-65 UniRef50_B7RYI4 Transcriptional regulator, RpiR family protein n... 250 4e-65 UniRef50_C1PED1 Transcriptional regulator, RpiR family n=1 Tax=B... 249 1e-64 UniRef50_Q03YQ8 Transcriptional regulator n=4 Tax=Leuconostocace... 248 2e-64 UniRef50_Q03HR4 Transcriptional regulator, RpiR family n=2 Tax=P... 247 2e-64 UniRef50_A8RZI5 Putative uncharacterized protein n=1 Tax=Clostri... 247 2e-64 UniRef50_B9CM70 Transcriptional regulator, RpiR family n=1 Tax=A... 247 3e-64 UniRef50_D1PSB4 Transcriptional regulator n=3 Tax=Clostridiales ... 247 3e-64 UniRef50_C0R285 Transcriptional regulator n=1 Tax=Brachyspira hy... 247 3e-64 UniRef50_A1JQZ2 RpiR family regulatory protein n=12 Tax=Enteroba... 247 4e-64 UniRef50_D0DKU0 Transcriptional regulator n=1 Tax=Lactobacillus ... 246 6e-64 UniRef50_Q2JBJ8 Transcriptional regulator, RpiR family n=1 Tax=F... 246 7e-64 UniRef50_A0Z4E2 Transcriptional regulator n=3 Tax=Bacteria RepID... 246 9e-64 UniRef50_B5HLI6 RpiR-family transcriptional regulator n=3 Tax=St... 245 1e-63 UniRef50_A8UCF6 Phosphosugar-binding transcriptional regulator, ... 245 1e-63 UniRef50_C1IBM1 Phosphosugar-binding transcriptional regulator n... 245 1e-63 UniRef50_A6T0F7 Transcriptional regulator, RpiR family n=2 Tax=O... 245 1e-63 UniRef50_A4WDW6 Transcriptional regulator n=10 Tax=Enterobacteri... 245 2e-63 UniRef50_C9L6X6 Transcriptional regulator, RpiR family n=1 Tax=B... 245 2e-63 UniRef50_A8RDU7 Putative uncharacterized protein n=1 Tax=Eubacte... 244 2e-63 UniRef50_A8UBX8 Phosphosugar-binding transcriptional regulator, ... 244 2e-63 UniRef50_A2RL41 Transcriptional regulator, RpiR family n=4 Tax=L... 244 2e-63 UniRef50_B5FDJ7 Transcriptional regulator, RpiR family protein n... 244 2e-63 UniRef50_B1QW74 Transcriptional regulator n=2 Tax=Clostridium bu... 244 3e-63 UniRef50_C5BVH6 Transcriptional regulator, RpiR family n=2 Tax=A... 244 4e-63 UniRef50_Q6AH41 Transcriptional regulator, RpiR family n=1 Tax=L... 243 5e-63 UniRef50_Q2SNY6 Transcriptional regulator n=1 Tax=Hahella chejue... 243 6e-63 UniRef50_C0X1P6 Transcriptional regulator RpiR n=21 Tax=Enteroco... 243 6e-63 UniRef50_B9DJX2 Putative RpiR family transcriptional regulator n... 242 8e-63 UniRef50_C7REF2 Transcriptional regulator, RpiR family n=2 Tax=A... 242 8e-63 UniRef50_C5C1Y9 Transcriptional regulator, RpiR family n=1 Tax=B... 242 9e-63 UniRef50_A6D304 DNA-binding transcriptional repressor RpiR n=1 T... 242 9e-63 UniRef50_D0KLH9 Transcriptional regulator, RpiR family n=1 Tax=P... 242 1e-62 UniRef50_Q040R4 Transcriptional regulator n=8 Tax=Lactobacillus ... 242 1e-62 UniRef50_D0XGH5 Putative uncharacterized protein n=1 Tax=Vibrio ... 242 1e-62 UniRef50_D0I0X8 Sialic acid utilization regulator RpiR family n=... 242 1e-62 UniRef50_B6G0W9 Putative uncharacterized protein n=1 Tax=Clostri... 241 1e-62 UniRef50_D0R5V5 Transcriptional regulator n=10 Tax=Lactobacillus... 241 1e-62 UniRef50_D2AGN5 Transcriptional regulator, RpiR family n=1 Tax=S... 241 2e-62 UniRef50_B0NYS8 Putative uncharacterized protein n=2 Tax=Clostri... 241 2e-62 UniRef50_Q03CI3 Transcriptional regulator n=10 Tax=Lactobacillac... 241 3e-62 UniRef50_Q03CT7 Transcriptional regulator n=7 Tax=Lactobacillus ... 240 3e-62 UniRef50_UPI00016945F6 hypothetical protein Plarl_13824 n=1 Tax=... 240 4e-62 UniRef50_C8SX74 Transcriptional regulator, RpiR family n=1 Tax=M... 240 4e-62 UniRef50_C6VNS3 Transcription regulator n=3 Tax=Lactobacillus pl... 239 6e-62 UniRef50_Q1WQV4 Transcriptional regulator, RpiR family n=4 Tax=L... 239 9e-62 UniRef50_C5EPZ9 Transcriptional regulator n=2 Tax=Clostridiales ... 239 1e-61 UniRef50_C0C246 Putative uncharacterized protein n=2 Tax=Clostri... 239 1e-61 UniRef50_C2H8J8 Bifunctional RpiR family transcriptional regulat... 239 1e-61 UniRef50_C8JWL0 Phosphosugar-binding transcriptional regulator n... 238 1e-61 UniRef50_Q2J8J9 Transcriptional regulator, RpiR family n=1 Tax=F... 238 2e-61 UniRef50_C2HLD1 Transcriptional regulator n=3 Tax=Lactobacillus ... 237 3e-61 UniRef50_B1R0U2 Transcriptional regulator, RpiR family n=9 Tax=F... 237 3e-61 UniRef50_A1BB20 Transcriptional regulator, RpiR family n=1 Tax=P... 237 4e-61 UniRef50_UPI000197BCAC RpiR family transcriptional regulator n=1... 237 4e-61 UniRef50_Q02YU6 Transcriptional regulator n=4 Tax=Lactobacillale... 237 4e-61 UniRef50_UPI0001BCD92E RpiR family transcriptional regulator n=1... 236 5e-61 UniRef50_A6LRG7 Transcriptional regulator, RpiR family n=2 Tax=F... 236 6e-61 UniRef50_Q1J2N3 Transcriptional regulator, RpiR family n=2 Tax=D... 236 1e-60 UniRef50_UPI00017F2FF2 transcriptional regulator n=1 Tax=Escheri... 235 1e-60 UniRef50_B9NXN7 Bifunctional protein glk n=2 Tax=Rhodobacteracea... 235 2e-60 UniRef50_A9MLD6 Putative uncharacterized protein n=1 Tax=Salmone... 234 2e-60 UniRef50_B7UNF1 Predicted transcriptional regulator, RpiR family... 234 3e-60 UniRef50_B9YAK0 Putative uncharacterized protein n=1 Tax=Holdema... 234 4e-60 UniRef50_C0X148 RpiR family transcriptional regulator n=22 Tax=E... 233 5e-60 UniRef50_C6J2D0 Transcription regulator n=1 Tax=Paenibacillus sp... 233 5e-60 UniRef50_Q5WK55 RpiR family transcriptional regulator n=1 Tax=Ba... 233 6e-60 UniRef50_C3RHA3 Transcriptional regulator n=3 Tax=Bacteria RepID... 232 7e-60 UniRef50_P46117 Uncharacterized HTH-type transcriptional regulat... 232 7e-60 UniRef50_B7RLA4 Transcriptional regulator, RpiR family n=1 Tax=R... 232 9e-60 UniRef50_B5GNW3 RpiR-family transcriptional regulator n=14 Tax=S... 232 1e-59 UniRef50_Q28KP3 Transcriptional regulator, RpiR family n=6 Tax=A... 231 2e-59 UniRef50_D1AK74 Transcriptional regulator, RpiR family n=1 Tax=S... 231 2e-59 UniRef50_D0RS60 RpiR family transcriptional regulator n=2 Tax=La... 231 3e-59 UniRef50_P0ACS8 HTH-type transcriptional regulator rpiR n=34 Tax... 230 4e-59 UniRef50_B7C842 Putative uncharacterized protein n=1 Tax=Eubacte... 230 4e-59 UniRef50_D1AYR1 Transcriptional regulator, RpiR family n=2 Tax=F... 230 5e-59 UniRef50_UPI00016A71F3 transcriptional regulator, RpiR family pr... 229 6e-59 UniRef50_C3RI81 Sugar isomerase n=1 Tax=Mollicutes bacterium D7 ... 229 7e-59 UniRef50_C3RM35 Transcriptional regulator n=2 Tax=Bacteria RepID... 229 7e-59 UniRef50_C0X6G8 RpiR family transcriptional regulator n=23 Tax=E... 229 9e-59 UniRef50_C7HWK5 RpiR family phosphosugar-binding transcriptional... 228 2e-58 UniRef50_A3DDB2 Transcriptional regulator, RpiR family n=5 Tax=C... 228 2e-58 UniRef50_C4FU45 Putative uncharacterized protein n=1 Tax=Catonel... 228 2e-58 UniRef50_D2BPE4 Transcriptional regulator, RpiR family n=1 Tax=L... 227 2e-58 UniRef50_C2KD15 RpiR family transcriptional regulator n=3 Tax=La... 227 2e-58 UniRef50_B7CB00 Putative uncharacterized protein n=1 Tax=Eubacte... 227 2e-58 UniRef50_B6GAC9 Putative uncharacterized protein n=1 Tax=Collins... 227 2e-58 UniRef50_Q71VW8 Phosphosugar-binding transcriptional regulator, ... 227 2e-58 UniRef50_C8P0W4 RpiR family phosphosugar-binding transcriptional... 227 4e-58 UniRef50_Q03FC5 Transcriptional regulator n=1 Tax=Pediococcus pe... 227 4e-58 UniRef50_A8UCF8 Phosphosugar-binding transcriptional regulator, ... 226 5e-58 UniRef50_Q03HW7 Transcriptional regulator n=13 Tax=Lactobacillal... 226 7e-58 UniRef50_A9BEU1 Transcriptional regulator, RpiR family n=1 Tax=P... 226 7e-58 UniRef50_C6B6F5 Transcriptional regulator, RpiR family n=7 Tax=A... 226 8e-58 UniRef50_C6VMT8 Transcription regulator n=3 Tax=Lactobacillus pl... 226 9e-58 UniRef50_B7X566 Transcriptional regulator, RpiR family n=1 Tax=C... 226 9e-58 UniRef50_C7XVK6 6-phospho 3-hexuloisomerase n=1 Tax=Lactobacillu... 225 1e-57 UniRef50_D2ELR8 Transcription regulator n=1 Tax=Pediococcus acid... 225 2e-57 UniRef50_C4KYQ0 Transcriptional regulator, RpiR family n=1 Tax=E... 224 2e-57 UniRef50_Q1YGT9 Putative transcriptional regulator, RpiR family ... 224 2e-57 UniRef50_B2UK47 Transcriptional regulator, RpiR family n=5 Tax=R... 224 3e-57 UniRef50_B7LQI9 Transcriptional regulator n=32 Tax=Gammaproteoba... 224 3e-57 UniRef50_C0X0S9 RpiR family transcriptional regulator n=22 Tax=E... 224 3e-57 UniRef50_A8RCR9 Putative uncharacterized protein n=1 Tax=Eubacte... 224 3e-57 UniRef50_C5D4L1 Transcriptional regulator, RpiR family n=1 Tax=G... 224 4e-57 UniRef50_C2L0R5 Possible transcriptional regulator RpiR n=1 Tax=... 223 4e-57 UniRef50_C0D858 Putative uncharacterized protein n=1 Tax=Clostri... 223 5e-57 UniRef50_Q15N75 Transcriptional regulator, RpiR family n=1 Tax=P... 223 6e-57 UniRef50_C2KAY2 Transcriptional regulator n=6 Tax=Lactobacillus ... 223 6e-57 UniRef50_C0XD02 RpiR family transcriptional regulator n=1 Tax=La... 222 8e-57 UniRef50_C3WAG5 Transcriptional regulator n=1 Tax=Fusobacterium ... 222 9e-57 UniRef50_UPI000196B715 hypothetical protein CATMIT_00151 n=1 Tax... 222 9e-57 UniRef50_C0C5Q9 Putative uncharacterized protein n=1 Tax=Clostri... 222 1e-56 UniRef50_C9A459 Phosphosugar isomerase transcriptional regulator... 222 1e-56 UniRef50_C2C459 RpiR family transcriptional regulator n=1 Tax=Li... 222 1e-56 UniRef50_Q1J381 Transcriptional regulator, RpiR family n=1 Tax=D... 222 1e-56 UniRef50_Q71W74 Phosphosugar-binding transcriptional regulator, ... 221 2e-56 UniRef50_C2LK66 Phosphosugar-binding transcriptional regulator n... 221 2e-56 UniRef50_Q38V38 Putative transcriptional regulator with a sugari... 221 2e-56 UniRef50_Q0BBX6 Transcriptional regulator, RpiR family n=65 Tax=... 221 3e-56 UniRef50_A9WVK2 Transcriptional regulator, RpiR family n=2 Tax=M... 221 3e-56 UniRef50_A1HTD9 Transcriptional regulator, RpiR family n=1 Tax=T... 220 3e-56 UniRef50_B9Y4T6 Putative uncharacterized protein n=2 Tax=Holdema... 220 4e-56 UniRef50_C3RHU4 Transcriptional regulator n=2 Tax=Bacteria RepID... 220 4e-56 UniRef50_C9A857 Transcription regulator n=3 Tax=Enterococcus cas... 220 4e-56 UniRef50_A6UGP6 Transcriptional regulator, RpiR family n=1 Tax=S... 220 4e-56 UniRef50_UPI0001BC57B3 oxygen-independent coproporphyrinogen III... 220 5e-56 UniRef50_A4E6N7 Putative uncharacterized protein n=1 Tax=Collins... 219 7e-56 UniRef50_A8U5E8 Putative uncharacterized protein n=1 Tax=Carnoba... 219 8e-56 UniRef50_C3RHU3 Transcriptional regulator n=2 Tax=Bacteria RepID... 219 9e-56 UniRef50_C9XPJ9 RpiR-family transcriptional regulator n=5 Tax=Cl... 219 1e-55 UniRef50_C9S176 Transcriptional regulator, RpiR family n=2 Tax=G... 219 1e-55 UniRef50_UPI00019054B9 hypothetical protein RetlB5_21050 n=1 Tax... 219 1e-55 UniRef50_B9E8A7 Putative uncharacterized protein n=1 Tax=Macroco... 218 1e-55 UniRef50_C7TGD6 Transcriptional regulator, RpiR family n=3 Tax=L... 218 2e-55 UniRef50_B7IEI4 Transcriptional regulator, RpiR family n=1 Tax=T... 217 3e-55 UniRef50_B1Y2D5 Glucokinase n=1 Tax=Leptothrix cholodnii SP-6 Re... 217 4e-55 UniRef50_C8QBF9 Transcriptional regulator, RpiR family n=1 Tax=P... 217 4e-55 UniRef50_C7T7Y4 Transcriptional regulator n=8 Tax=Lactobacillus ... 217 4e-55 UniRef50_C3RKL9 Sugar isomerase n=3 Tax=Bacteria RepID=C3RKL9_9MOLU 217 4e-55 UniRef50_C8ZYC7 Sugar isomerase n=4 Tax=Enterococcus RepID=C8ZYC... 216 7e-55 UniRef50_A5IV96 Transcriptional regulator, RpiR family n=113 Tax... 216 8e-55 UniRef50_Q041H9 Transcriptional regulator n=22 Tax=Lactobacillus... 216 8e-55 UniRef50_C4F999 Putative uncharacterized protein n=1 Tax=Collins... 215 1e-54 UniRef50_B1Q8U9 Putative phosphosugar-binding transcriptional re... 215 2e-54 UniRef50_C3FD32 Phosphosugar-binding transcriptional regulator n... 215 2e-54 UniRef50_C2HCM3 RpiR family transcriptional regulator n=12 Tax=E... 214 2e-54 UniRef50_B4SHK0 Transcriptional regulator, RpiR family n=3 Tax=S... 214 2e-54 UniRef50_C5RF15 Transcriptional regulator, RpiR family n=1 Tax=C... 214 2e-54 UniRef50_B1QVU2 Transcriptional regulator, RpiR family n=9 Tax=C... 214 3e-54 UniRef50_C0Q155 Protein rpiR n=2 Tax=Salmonella enterica RepID=C... 214 3e-54 UniRef50_Q88UA4 Transcription regulator n=1 Tax=Lactobacillus pl... 214 3e-54 UniRef50_B0NFU9 Putative uncharacterized protein n=2 Tax=Clostri... 214 3e-54 UniRef50_A6LS27 Transcriptional regulator, RpiR family n=1 Tax=C... 214 4e-54 UniRef50_C6JFN2 Transcriptional regulator n=3 Tax=Clostridiales ... 213 5e-54 UniRef50_C3RR03 Sugar isomerase n=2 Tax=Bacteria RepID=C3RR03_9MOLU 213 5e-54 UniRef50_B0MBA6 Putative uncharacterized protein n=2 Tax=Clostri... 213 5e-54 UniRef50_A6M2X4 Transcriptional regulator, RpiR family n=4 Tax=C... 213 6e-54 UniRef50_B0NJ36 Putative uncharacterized protein n=1 Tax=Clostri... 212 1e-53 UniRef50_A6UIG8 Transcriptional regulator, RpiR family n=8 Tax=R... 212 1e-53 UniRef50_Q4L9T6 Similar to transcriptional regulator n=2 Tax=Sta... 212 1e-53 UniRef50_A8FIJ8 RpiR family transcriptional regulator n=2 Tax=Ba... 212 1e-53 UniRef50_Q0STT6 Transcriptional regulator, RpiR family n=14 Tax=... 211 2e-53 UniRef50_A6M3B1 Transcriptional regulator, RpiR family n=1 Tax=C... 211 2e-53 UniRef50_A5IPI4 Transcriptional regulator, RpiR family n=54 Tax=... 211 2e-53 UniRef50_C0BYY2 Putative uncharacterized protein n=1 Tax=Clostri... 211 2e-53 UniRef50_UPI000196B4B9 hypothetical protein CATMIT_00397 n=1 Tax... 211 3e-53 UniRef50_B9Y3J7 Putative uncharacterized protein n=1 Tax=Holdema... 211 3e-53 UniRef50_C3RJC3 Sugar isomerase n=5 Tax=Bacteria RepID=C3RJC3_9MOLU 211 3e-53 UniRef50_C3RM54 Putative uncharacterized protein n=2 Tax=Bacteri... 210 4e-53 UniRef50_B9DVM9 RpiR family regulatory protein n=2 Tax=Streptoco... 210 4e-53 UniRef50_A6BIK8 Putative uncharacterized protein n=9 Tax=Clostri... 210 4e-53 UniRef50_UPI0001BC58DB RpiR family transcriptional regulator n=1... 210 5e-53 UniRef50_D1TJG3 Putative transcriptional regulator, RpiR family ... 210 5e-53 UniRef50_C0DAS9 Putative uncharacterized protein n=1 Tax=Clostri... 210 5e-53 UniRef50_B9Y4Q7 Putative uncharacterized protein n=3 Tax=Firmicu... 210 6e-53 UniRef50_Q9K8R3 BH2940 protein n=4 Tax=Bacillus RepID=Q9K8R3_BACHD 210 6e-53 UniRef50_C4Z5R8 N-acylmannosamine kinase n=1 Tax=Eubacterium eli... 210 6e-53 UniRef50_A9IGF4 Transcriptional regulator, RpiR family n=10 Tax=... 209 6e-53 UniRef50_B3EUN5 Transcriptional regulator, RpiR family n=1 Tax=B... 209 6e-53 UniRef50_C2EDG2 RpiR family transcriptional regulator n=1 Tax=La... 209 6e-53 UniRef50_C9KLC1 Transcriptional regulator, RpiR family n=1 Tax=M... 209 7e-53 UniRef50_C8N6B7 RpiR family phosphosugar-binding transcriptional... 209 1e-52 UniRef50_C9Q9L7 Helix-turn-helix protein RpiR n=6 Tax=Vibrio Rep... 208 2e-52 UniRef50_UPI000169311A hypothetical protein Plarl_08670 n=1 Tax=... 208 2e-52 UniRef50_D2PSH8 Transcriptional regulator, RpiR family n=1 Tax=K... 208 2e-52 UniRef50_C8NE33 RpiR family phosphosugar-binding transcriptional... 207 2e-52 UniRef50_B0N5H7 Putative uncharacterized protein n=1 Tax=Clostri... 207 4e-52 UniRef50_C6JLG4 Predicted protein n=2 Tax=Fusobacterium RepID=C6... 206 6e-52 UniRef50_Q1GCY7 Transcriptional regulator, RpiR family n=2 Tax=R... 206 6e-52 UniRef50_D1C9F1 Transcriptional regulator, RpiR family n=1 Tax=S... 206 6e-52 UniRef50_B9B6B2 Transcriptional regulator, RpiR family n=3 Tax=B... 206 6e-52 UniRef50_A5KIQ4 Putative uncharacterized protein n=2 Tax=Ruminoc... 206 6e-52 UniRef50_A6W619 Transcriptional regulator, RpiR family n=1 Tax=K... 206 7e-52 UniRef50_A0YBK7 Transcriptional regulator n=1 Tax=marine gamma p... 206 7e-52 UniRef50_D1BBP1 Transcriptional regulator n=2 Tax=Micrococcineae... 206 8e-52 UniRef50_UPI0001C36367 transcriptional regulator, RpiR family pr... 205 9e-52 UniRef50_A0ZNS9 Putative uncharacterized protein n=3 Tax=Photoba... 205 1e-51 UniRef50_UPI0000D541FA probable transcriptional regulator n=1 Ta... 205 1e-51 UniRef50_B1KTP2 Transcriptional regulator, RpiR family n=10 Tax=... 205 1e-51 UniRef50_C0C1I3 Putative uncharacterized protein n=1 Tax=Clostri... 205 2e-51 UniRef50_B2UF98 Transcriptional regulator, RpiR family n=2 Tax=R... 205 2e-51 UniRef50_B9DUA5 Putative transcriptional regulator n=1 Tax=Strep... 204 2e-51 UniRef50_Q8RAK1 Transcriptional regulator n=1 Tax=Thermoanaeroba... 204 3e-51 UniRef50_A8F424 Transcriptional regulator, RpiR family n=1 Tax=T... 204 4e-51 UniRef50_C3WA33 Transcriptional regulator n=3 Tax=Fusobacterium ... 204 4e-51 UniRef50_UPI0001C42AD8 transcriptional regulator n=1 Tax=Bacillu... 203 5e-51 UniRef50_C7CRC1 Predicted protein n=24 Tax=Enterococcus RepID=C7... 203 6e-51 UniRef50_Q89XK4 Transcriptional regulatory protein n=1 Tax=Brady... 203 6e-51 UniRef50_B1QUP4 Phosphosugar-binding transcriptional regulator, ... 202 7e-51 UniRef50_C8STB5 Transcriptional regulator, RpiR family n=1 Tax=M... 202 9e-51 UniRef50_A1WRM9 Transcriptional regulator, RpiR family n=2 Tax=C... 202 1e-50 UniRef50_C5CD76 Transcriptional regulator, RpiR family n=1 Tax=K... 202 1e-50 UniRef50_UPI0001B56E76 RpiR family transcriptional regulator n=1... 202 1e-50 UniRef50_B9DT48 RpiR family regulatory protein n=1 Tax=Streptoco... 200 3e-50 UniRef50_B2TKZ2 RpiR-family transcriptional regulator n=49 Tax=B... 200 3e-50 UniRef50_C3RI70 Phosphosugar-binding transcriptional regulator n... 200 4e-50 UniRef50_C3RH23 Predicted protein n=2 Tax=Bacteria RepID=C3RH23_... 200 4e-50 UniRef50_A4IT25 Transcriptional regulator n=5 Tax=Bacillaceae Re... 200 4e-50 UniRef50_B0N0Q7 Putative uncharacterized protein n=1 Tax=Clostri... 200 5e-50 UniRef50_C7NDE7 Transcriptional regulator, RpiR family n=2 Tax=L... 200 5e-50 UniRef50_A5VV40 Transcriptional regulator, RpiR family n=37 Tax=... 199 7e-50 UniRef50_A4CAD1 Transcriptional regulator n=1 Tax=Pseudoalteromo... 199 7e-50 UniRef50_C4Z9F6 N-acetylmannosamine kinase n=4 Tax=Clostridiales... 199 8e-50 UniRef50_UPI000196C8C2 hypothetical protein CATMIT_03055 n=1 Tax... 199 9e-50 UniRef50_C8P486 Transcription regulator n=1 Tax=Lactobacillus an... 199 1e-49 UniRef50_A5KNM9 Putative uncharacterized protein n=1 Tax=Ruminoc... 199 1e-49 UniRef50_B7GSI0 Transcriptional regulator, RpiR family n=1 Tax=B... 198 2e-49 UniRef50_A8S4W0 Putative uncharacterized protein n=1 Tax=Clostri... 198 2e-49 UniRef50_B1M7S3 Transcriptional regulator, RpiR family n=1 Tax=M... 198 2e-49 UniRef50_B6GAY7 Putative uncharacterized protein n=1 Tax=Collins... 197 4e-49 UniRef50_Q46ZY9 Transcriptional regulator, RpiR family n=74 Tax=... 197 4e-49 UniRef50_B0PG82 Putative uncharacterized protein n=1 Tax=Anaerot... 197 5e-49 UniRef50_B2IRS9 Phosphosugar-binding transcriptional regulator, ... 197 5e-49 UniRef50_Q9KGC3 BH0181 protein n=3 Tax=Bacillus RepID=Q9KGC3_BACHD 196 6e-49 UniRef50_D1AP79 Transcriptional regulator, RpiR family n=1 Tax=S... 196 7e-49 UniRef50_Q21ZX8 Transcriptional regulator, RpiR family n=4 Tax=C... 196 8e-49 UniRef50_C5EP47 Transcriptional regulator n=2 Tax=Clostridiales ... 195 1e-48 UniRef50_C1B8E5 Putative RpiR family transcriptional regulator n... 195 1e-48 UniRef50_A6LTU2 Transcriptional regulator, RpiR family n=3 Tax=C... 195 1e-48 UniRef50_C7H192 RpiR familytranscriptional regulator with phosph... 195 1e-48 UniRef50_A4XR90 Transcriptional regulator, RpiR family n=2 Tax=P... 195 1e-48 UniRef50_B8DD46 Phosphosugar-binding transcriptional regulator, ... 195 1e-48 UniRef50_C8NIR7 RpiR family phosphosugar-binding transcriptional... 195 2e-48 UniRef50_A6DTP0 Putative transcriptional regulator, rpiR family ... 195 2e-48 UniRef50_A8F3C1 Transcriptional regulator, RpiR family n=7 Tax=T... 195 2e-48 UniRef50_A4EBN8 Putative uncharacterized protein n=1 Tax=Collins... 194 2e-48 UniRef50_C2MLM8 Transcriptional regulator n=1 Tax=Bacillus cereu... 194 3e-48 UniRef50_C3RRE4 Transcriptional regulator n=2 Tax=Bacteria RepID... 194 3e-48 UniRef50_A8U8R6 Putative uncharacterized protein n=1 Tax=Carnoba... 194 3e-48 UniRef50_B9Y9Y3 Putative uncharacterized protein n=1 Tax=Holdema... 194 4e-48 UniRef50_C6JEA0 Transcriptional regulator n=1 Tax=Ruminococcus s... 194 4e-48 UniRef50_D0BLW5 Transcriptional regulator, RpiR family n=3 Tax=G... 194 4e-48 UniRef50_C0EW96 Putative uncharacterized protein n=1 Tax=Eubacte... 193 5e-48 UniRef50_Q2J952 Transcriptional regulator, RpiR family n=3 Tax=F... 193 5e-48 UniRef50_B6FRS1 Putative uncharacterized protein n=1 Tax=Clostri... 193 6e-48 UniRef50_C0CJY4 Putative uncharacterized protein n=1 Tax=Blautia... 193 8e-48 UniRef50_C5BXN6 Transcriptional regulator, RpiR family n=1 Tax=B... 192 9e-48 UniRef50_C0ZHI7 Transcriptional regulator n=1 Tax=Brevibacillus ... 192 1e-47 UniRef50_D0KI21 Transcriptional regulator, RpiR family n=84 Tax=... 192 1e-47 UniRef50_C1TN65 Transcriptional regulator n=1 Tax=Dethiosulfovib... 191 2e-47 UniRef50_C5RND9 Transcriptional regulator, RpiR family n=1 Tax=C... 191 2e-47 UniRef50_Q5WD27 Transcriptional regulator n=8 Tax=Bacilli RepID=... 191 3e-47 UniRef50_Q5WBH0 RpiR family transcriptional regulator n=1 Tax=Ba... 190 3e-47 UniRef50_C0ZE98 Transcriptional regulator n=1 Tax=Brevibacillus ... 190 3e-47 UniRef50_Q2BFK6 Probable glucose kinase n=3 Tax=Firmicutes RepID... 190 5e-47 UniRef50_Q1JDL9 Transcriptional regulator, RpiR family n=21 Tax=... 190 5e-47 UniRef50_A6VVN8 Transcriptional regulator, RpiR family n=1 Tax=M... 189 7e-47 UniRef50_C9XQG1 Phosphosugar-binding transcriptional regulator n... 189 7e-47 UniRef50_C1I751 Predicted protein n=3 Tax=Bacteria RepID=C1I751_... 189 8e-47 UniRef50_Q2SAA1 Transcriptional regulator n=1 Tax=Hahella chejue... 189 1e-46 UniRef50_B6G7X7 Putative uncharacterized protein n=1 Tax=Collins... 189 1e-46 UniRef50_A7G380 Transcriptional regulator, RpiR family n=1 Tax=C... 189 1e-46 UniRef50_B4BI96 Transcriptional regulator, RpiR family n=1 Tax=G... 189 1e-46 UniRef50_Q03HS5 Transcriptional regulator n=2 Tax=Pediococcus Re... 189 1e-46 UniRef50_C1DL90 Sugar isomerase (SIS) n=48 Tax=Proteobacteria Re... 188 2e-46 UniRef50_B5XS91 Transcriptional regulator, RpiR family n=3 Tax=E... 188 2e-46 UniRef50_C3WYI9 Transcription regulator n=6 Tax=Fusobacterium Re... 188 2e-46 UniRef50_UPI0001BC5E7D RpiR family transcriptional regulator n=1... 188 2e-46 UniRef50_C4ZEF4 Glucokinase n=2 Tax=Clostridiales RepID=C4ZEF4_E... 188 2e-46 UniRef50_Q0KEK8 Transcriptional regulator, GlvR-family n=57 Tax=... 187 3e-46 UniRef50_A3IB77 Transcriptional regulator n=1 Tax=Bacillus sp. B... 187 3e-46 UniRef50_A7GA30 Transcriptional regulator, RpiR family n=10 Tax=... 187 4e-46 UniRef50_UPI000196AB43 hypothetical protein CATMIT_01461 n=1 Tax... 187 5e-46 UniRef50_A1WPP9 Transcriptional regulator, RpiR family n=1 Tax=V... 186 7e-46 UniRef50_A6LZ63 Transcriptional regulator, RpiR family n=1 Tax=C... 186 7e-46 UniRef50_C6QNE5 Transcriptional regulator, RpiR family n=1 Tax=G... 186 7e-46 UniRef50_C3RP06 Transcriptional regulator n=2 Tax=Bacteria RepID... 186 8e-46 UniRef50_C9RVZ8 Transcriptional regulator, RpiR family n=5 Tax=B... 185 1e-45 UniRef50_B0NY52 Putative uncharacterized protein n=1 Tax=Clostri... 185 1e-45 UniRef50_C0CX07 Putative uncharacterized protein n=1 Tax=Clostri... 185 1e-45 UniRef50_A6M2C0 Transcriptional regulator, RpiR family n=50 Tax=... 185 1e-45 UniRef50_C5EFX0 N-acetylmannosamine kinase n=1 Tax=Clostridiales... 185 1e-45 UniRef50_C7HVZ9 RpiR family phosphosugar-binding transcriptional... 184 2e-45 UniRef50_Q03HE1 Transcriptional regulator n=1 Tax=Pediococcus pe... 184 2e-45 UniRef50_C9M9W1 Transcriptional regulator, RpiR family n=1 Tax=J... 184 2e-45 UniRef50_D2AU61 Putative transcriptional regulator, RpiR family ... 184 2e-45 UniRef50_Q723C8 Phosphosugar-binding transcriptional regulator, ... 184 2e-45 UniRef50_C1I4M4 Predicted protein n=1 Tax=Clostridium sp. 7_2_43... 184 4e-45 UniRef50_C5BWC4 Transcriptional regulator, RpiR family n=1 Tax=B... 184 4e-45 UniRef50_C8Q2X6 Transcriptional regulator, RpiR family n=1 Tax=P... 183 5e-45 UniRef50_A9BVS1 Transcriptional regulator, RpiR family n=4 Tax=c... 183 5e-45 UniRef50_Q6MTZ4 Transcription regulator gntR n=2 Tax=Mycoplasma ... 183 5e-45 UniRef50_B5RKH7 Transcriptional regulator, RpiR family n=2 Tax=P... 183 6e-45 UniRef50_C6JLR3 Transcription regulator n=1 Tax=Fusobacterium va... 182 8e-45 UniRef50_C3RJI4 Transcriptional regulator n=2 Tax=Bacteria RepID... 182 1e-44 UniRef50_C5F607 Predicted protein n=1 Tax=Lactobacillus paracase... 182 2e-44 UniRef50_A9WLS8 Transcriptional regulator, RpiR family n=1 Tax=R... 181 2e-44 UniRef50_Q11C05 Transcriptional regulator, RpiR family n=1 Tax=C... 181 2e-44 UniRef50_UPI000196B851 hypothetical protein CATMIT_00169 n=1 Tax... 181 2e-44 UniRef50_B9DLT1 Truncated putative RpiR family transcriptional r... 181 3e-44 UniRef50_B9K550 Transcriptional regulator n=1 Tax=Agrobacterium ... 181 3e-44 UniRef50_C5SGA6 Transcriptional regulator, RpiR family n=1 Tax=A... 181 3e-44 UniRef50_C5B7U9 Transcriptional regulator, RpiR family protein n... 181 3e-44 UniRef50_B5E566 Transcriptional regulator, RpiR family n=10 Tax=... 180 4e-44 UniRef50_A4WSY4 Transcriptional regulator, RpiR family n=19 Tax=... 180 4e-44 UniRef50_C9NY46 Predicted transcriptional regulator of the myo-i... 180 5e-44 UniRef50_C0D8Y2 Putative uncharacterized protein n=1 Tax=Clostri... 180 5e-44 UniRef50_C9M9F8 Transcriptional regulator, RpiR family n=1 Tax=J... 180 6e-44 UniRef50_P54717 HTH-type transcriptional regulator glvR n=4 Tax=... 180 6e-44 UniRef50_B9R568 SIS domain protein n=2 Tax=Labrenzia RepID=B9R56... 180 6e-44 UniRef50_Q6LK40 Putative transcriptional regulator n=3 Tax=Vibri... 179 7e-44 UniRef50_D1Y5K3 SIS domain protein n=1 Tax=Pyramidobacter piscol... 179 7e-44 UniRef50_C2HQZ9 Transcriptional regulator n=2 Tax=Lactobacillus ... 179 7e-44 UniRef50_UPI000196B86F hypothetical protein CATMIT_00765 n=1 Tax... 179 8e-44 UniRef50_B4BR41 Transcriptional regulator, RpiR family n=3 Tax=B... 179 9e-44 UniRef50_Q6M5C3 Transcriptional regulator, rpiR family n=3 Tax=C... 179 1e-43 UniRef50_C2H000 RpiR family transcriptional regulator n=26 Tax=E... 179 1e-43 UniRef50_B0NHF5 Putative uncharacterized protein n=3 Tax=Clostri... 179 1e-43 UniRef50_C6VJY7 Transcription regulator n=3 Tax=Lactobacillus pl... 179 1e-43 UniRef50_A6BJ02 Putative uncharacterized protein n=3 Tax=Clostri... 179 1e-43 UniRef50_A9BZX9 Transcriptional regulator, RpiR family n=1 Tax=D... 179 1e-43 UniRef50_D1P280 Transcriptional regulator n=5 Tax=Enterobacteria... 179 1e-43 UniRef50_D1Y461 Transcriptional regulator, RpiR family protein n... 178 2e-43 UniRef50_UPI0001C316A3 transcriptional regulator, RpiR family n=... 178 2e-43 UniRef50_C2JTN9 Transcriptional regulator n=3 Tax=Lactobacillus ... 178 3e-43 UniRef50_D1B967 Transcriptional regulator, RpiR family n=2 Tax=S... 177 3e-43 UniRef50_D2BNU3 Transcriptional regulator, RpiR family n=4 Tax=L... 177 3e-43 UniRef50_A1BAR1 Transcriptional regulator, RpiR family n=1 Tax=P... 177 4e-43 UniRef50_C2CZ55 RpiR family transcriptional regulator n=3 Tax=La... 177 4e-43 UniRef50_A6M2I1 Transcriptional regulator, RpiR family n=3 Tax=C... 175 1e-42 UniRef50_B1QZ16 Transcriptional regulator, RpiR family n=2 Tax=C... 175 1e-42 UniRef50_C3RPM1 Predicted protein n=3 Tax=Bacteria RepID=C3RPM1_... 175 1e-42 UniRef50_UPI000196BB09 hypothetical protein CATMIT_01392 n=1 Tax... 175 1e-42 UniRef50_C3RHW9 Phosphosugar-binding transcriptional regulator n... 175 1e-42 UniRef50_C9KM39 Transcriptional regulator GlvR n=2 Tax=Veillonel... 175 2e-42 UniRef50_C7MYE5 Transcriptional regulator n=1 Tax=Saccharomonosp... 175 2e-42 UniRef50_B8H4I3 Transcriptional regulator IolR n=2 Tax=Caulobact... 175 2e-42 UniRef50_C7HWU0 Putative uncharacterized protein n=1 Tax=Anaeroc... 175 2e-42 UniRef50_A5IVA6 Transcriptional regulator n=63 Tax=Staphylococcu... 174 2e-42 UniRef50_A6M092 Transcriptional regulator, RpiR family n=1 Tax=C... 174 2e-42 UniRef50_C6L8R9 Putative phosphosugar-binding transcriptional re... 174 2e-42 UniRef50_D2EJM8 Phosphosugar-binding transcriptional regulator n... 174 3e-42 UniRef50_B3WB04 RpiR-like protein n=8 Tax=Lactobacillus RepID=B3... 174 3e-42 UniRef50_C3RPB8 LacI-family transcriptional regulator n=2 Tax=Ba... 174 3e-42 UniRef50_C2APV8 Transcriptional regulator n=1 Tax=Tsukamurella p... 174 3e-42 UniRef50_C3RNE4 Transcriptional regulator n=3 Tax=Bacteria RepID... 174 4e-42 UniRef50_B9DUC4 RpiR-family regulatory protein n=1 Tax=Streptoco... 174 5e-42 UniRef50_UPI0001973198 transcriptional regulator, RpiR family pr... 174 5e-42 UniRef50_D2EIN0 Putative uncharacterized protein n=1 Tax=Pedioco... 173 7e-42 UniRef50_A6LRA2 Transcriptional regulator, RpiR family n=3 Tax=C... 173 7e-42 UniRef50_A6M2I0 Transcriptional regulator, RpiR family n=3 Tax=C... 172 9e-42 UniRef50_C0CQ65 Putative uncharacterized protein n=1 Tax=Blautia... 172 1e-41 UniRef50_A1WR14 Transcriptional regulator, RpiR family n=25 Tax=... 172 1e-41 UniRef50_D2EJX0 Transcriptional regulator n=1 Tax=Pediococcus ac... 172 1e-41 UniRef50_A8RA11 Putative uncharacterized protein n=1 Tax=Eubacte... 172 1e-41 UniRef50_Q04H60 Transcriptional regulator n=2 Tax=Oenococcus oen... 172 1e-41 UniRef50_C5EFT9 HTH-type transcriptional regulator glvR n=1 Tax=... 172 2e-41 UniRef50_Q38ZK5 Putative transcriptional regulator, RpiR family ... 171 2e-41 UniRef50_C2EL56 RpiR family transcriptional regulator n=4 Tax=La... 171 2e-41 UniRef50_A3TM76 Putative uncharacterized protein n=1 Tax=Janibac... 171 2e-41 UniRef50_Q0C066 SIS domain protein n=1 Tax=Hyphomonas neptunium ... 170 4e-41 UniRef50_B5ZFL0 Transcriptional regulator, RpiR family n=2 Tax=G... 170 4e-41 UniRef50_B2SAV7 SIS domain protein n=40 Tax=Alphaproteobacteria ... 170 5e-41 UniRef50_B2V3J3 Transcriptional regulator, RpiR family n=2 Tax=C... 170 6e-41 UniRef50_D2NRV5 Transcriptional regulator n=2 Tax=Rothia mucilag... 170 7e-41 UniRef50_UPI00019039EA RpiR family transcriptional regulator n=2... 169 7e-41 UniRef50_A9BRR5 Transcriptional regulator, RpiR family n=2 Tax=c... 169 1e-40 UniRef50_A5I3B9 Phosphosugar-binding transcriptional regulator n... 169 1e-40 UniRef50_A5IZ72 Transcriptional regulator n=1 Tax=Mycoplasma aga... 168 2e-40 UniRef50_A8GCW7 Transcriptional regulator, RpiR family n=1 Tax=S... 168 2e-40 UniRef50_B6R4H6 Transcriptional regulator, RpiR family n=1 Tax=P... 168 2e-40 UniRef50_A6X7I1 Transcriptional regulator, RpiR family n=1 Tax=O... 168 2e-40 UniRef50_UPI000196AB39 hypothetical protein CATMIT_01159 n=1 Tax... 168 2e-40 UniRef50_Q4KEH9 Transcriptional regulator, putative n=8 Tax=Pseu... 168 2e-40 UniRef50_C1IAA4 Transcriptional regulator n=1 Tax=Clostridium sp... 167 3e-40 UniRef50_B0NEG5 Putative uncharacterized protein n=1 Tax=Clostri... 167 3e-40 UniRef50_Q1GCU6 Transcriptional regulator, RpiR family n=2 Tax=R... 167 3e-40 UniRef50_UPI0001788C32 transcriptional regulator, RpiR family n=... 167 3e-40 UniRef50_A4JTS2 Transcriptional regulator, RpiR family n=1 Tax=B... 167 3e-40 UniRef50_A3X377 SIS domain protein n=5 Tax=Rhodobacteraceae RepI... 167 3e-40 UniRef50_A8TQ66 Transcriptional regulator n=1 Tax=alpha proteoba... 167 4e-40 UniRef50_Q02WG9 Transcriptional regulator n=6 Tax=Lactococcus Re... 167 4e-40 UniRef50_C6VQQ2 Transcription regulator n=4 Tax=Firmicutes RepID... 167 5e-40 UniRef50_UPI0001BC4077 transcriptional regulator n=1 Tax=Fusobac... 166 7e-40 UniRef50_B1HYT1 Transcriptional regulator n=2 Tax=Bacillaceae Re... 166 8e-40 UniRef50_Q5WG85 Transcriptional regulator n=3 Tax=Bacteria RepID... 166 8e-40 UniRef50_C3RJQ3 Predicted protein n=2 Tax=Bacteria RepID=C3RJQ3_... 166 8e-40 UniRef50_A6LTH7 Transcriptional regulator, RpiR family n=1 Tax=C... 166 9e-40 UniRef50_Q14LR0 Hypothetical transcriptional regulator with heli... 165 1e-39 UniRef50_B0MFI6 Putative uncharacterized protein n=2 Tax=Anaeros... 165 1e-39 UniRef50_C5EIL0 RpiR-family transcriptional regulator n=3 Tax=Cl... 165 1e-39 UniRef50_A6UBD6 Transcriptional regulator, RpiR family n=16 Tax=... 165 1e-39 UniRef50_C6VKP3 Transcription regulator n=3 Tax=Lactobacillus pl... 165 2e-39 UniRef50_C3W9G1 Predicted protein n=3 Tax=Fusobacterium RepID=C3... 165 2e-39 UniRef50_C6DBI2 Transcriptional regulator, RpiR family n=9 Tax=E... 165 2e-39 UniRef50_A9WNR4 Transcriptional regulator, RpiR family n=1 Tax=R... 165 2e-39 UniRef50_A4EUM4 Putative transcriptional regulator protein n=1 T... 164 2e-39 UniRef50_Q03NG7 Transcriptional regulator n=18 Tax=Bacilli RepID... 164 3e-39 UniRef50_C4XE43 Putative uncharacterized protein n=1 Tax=Mycopla... 164 3e-39 UniRef50_A6FUC4 Transcriptional regulator, RpiR family protein n... 164 3e-39 UniRef50_D1AK32 Transcriptional regulator, RpiR family n=1 Tax=S... 164 3e-39 UniRef50_C3RLZ3 Transcriptional regulator n=3 Tax=Bacteria RepID... 164 4e-39 UniRef50_C2HBU5 RpiR family transcriptional regulator n=3 Tax=En... 163 6e-39 UniRef50_Q4A725 Transcriptional regulator n=1 Tax=Mycoplasma syn... 163 6e-39 UniRef50_B5J441 SIS domain protein n=1 Tax=Octadecabacter antarc... 163 7e-39 UniRef50_C0FQ68 Putative uncharacterized protein n=1 Tax=Rosebur... 163 7e-39 UniRef50_C5NW06 Transcriptional regulator, RpiR family n=2 Tax=F... 162 9e-39 UniRef50_B2TLN0 Phosphosugar-binding protein n=1 Tax=Clostridium... 162 1e-38 UniRef50_A3V1X8 Transcriptional regulator, RpiR family n=1 Tax=L... 162 1e-38 UniRef50_A1FB39 Transcriptional regulator (Fragment) n=1 Tax=Vib... 162 1e-38 UniRef50_A6WWJ9 Transcriptional regulator, RpiR family n=1 Tax=O... 162 1e-38 UniRef50_C4V4P0 RpiR family transcriptional regulator n=1 Tax=Se... 162 2e-38 UniRef50_D1ARL0 Transcriptional regulator, RpiR family n=1 Tax=S... 161 2e-38 UniRef50_UPI0001C31BBF transcriptional regulator, RpiR family n=... 161 2e-38 UniRef50_A8S164 Putative uncharacterized protein n=1 Tax=Clostri... 161 2e-38 UniRef50_C3RJ39 Transcriptional regulator n=2 Tax=Bacteria RepID... 161 3e-38 UniRef50_A9D8B4 Putative uncharacterized protein n=1 Tax=Hoeflea... 160 3e-38 UniRef50_D2TS37 Putative DNA binding protein n=1 Tax=Citrobacter... 160 3e-38 UniRef50_A6P0T4 Putative uncharacterized protein n=1 Tax=Bactero... 160 3e-38 UniRef50_A3JGM7 Putative uncharacterized protein n=2 Tax=Proteob... 160 4e-38 UniRef50_A8S127 Putative uncharacterized protein n=1 Tax=Clostri... 160 4e-38 UniRef50_D0CNW7 Transcriptional regulator, RpiR family n=1 Tax=S... 160 4e-38 UniRef50_A3YDZ1 Putative transcriptional regulator n=1 Tax=Marin... 160 4e-38 UniRef50_A1BB42 Transcriptional regulator, RpiR family n=1 Tax=P... 160 5e-38 UniRef50_A9H555 Putative uncharacterized protein n=1 Tax=Roseoba... 160 5e-38 UniRef50_A4AG13 Putative uncharacterized protein n=1 Tax=marine ... 160 6e-38 UniRef50_Q8EMY0 Putative uncharacterized protein OB2710 n=1 Tax=... 160 6e-38 UniRef50_C2BN80 RpiR family transcriptional regulator n=1 Tax=Co... 159 7e-38 UniRef50_C5EIL1 RpiR-family transcriptional regulator n=2 Tax=Cl... 159 8e-38 UniRef50_C5EHV8 RpiR-family transcriptional regulator n=1 Tax=Cl... 159 8e-38 UniRef50_A1B8L9 Transcriptional regulator, RpiR family n=3 Tax=A... 159 9e-38 UniRef50_Q5LQ93 Transcriptional regulator, RpiR family n=5 Tax=R... 159 1e-37 UniRef50_B9JRN1 Transcriptional regulator protein n=2 Tax=Agroba... 159 1e-37 UniRef50_A5G0Y8 Transcriptional regulator, RpiR family n=7 Tax=P... 159 1e-37 UniRef50_B7QPC3 Transcriptional regulator, RpiR family n=4 Tax=R... 158 2e-37 UniRef50_A5TS02 RpiR family transcriptional regulator n=3 Tax=Fu... 158 2e-37 UniRef50_Q046R3 Transcriptional regulator n=7 Tax=Lactobacillus ... 158 3e-37 UniRef50_C4XF00 Putative uncharacterized protein n=1 Tax=Mycopla... 158 3e-37 UniRef50_Q97LM6 Transcriptional regulator, RpiR family n=6 Tax=C... 158 3e-37 UniRef50_B0G8I7 Putative uncharacterized protein n=1 Tax=Dorea f... 157 3e-37 UniRef50_Q184P9 Phosphosugar-binding transcriptional regulator n... 157 3e-37 UniRef50_Q16A62 Transcriptional regulator, RpiR family, putative... 157 3e-37 UniRef50_C2CHV1 RpiR family transcriptional regulator n=1 Tax=An... 157 4e-37 UniRef50_D0J1V5 Transcriptional regulator, RpiR family n=2 Tax=C... 157 4e-37 UniRef50_C2GZH1 RpiR family transcriptional regulator n=17 Tax=E... 157 5e-37 UniRef50_Q1IJ92 Transcriptional regulator, RpiR family n=1 Tax=C... 157 6e-37 UniRef50_C5EP41 RpiR family transcriptional regulator n=1 Tax=Cl... 157 6e-37 UniRef50_C9A4Z8 Transcription regulator n=4 Tax=Enterococcus Rep... 156 7e-37 UniRef50_B9DVI9 RpiR family regulatory protein n=1 Tax=Streptoco... 156 7e-37 UniRef50_C0VS80 RpiR family transcriptional regulator n=2 Tax=Co... 155 1e-36 UniRef50_Q09KH2 FitR n=27 Tax=Proteobacteria RepID=Q09KH2_ECOLX 155 2e-36 UniRef50_B2V3J2 Transcriptional regulator, RpiR family n=2 Tax=C... 154 2e-36 UniRef50_A6UKE0 Transcriptional regulator, RpiR family n=4 Tax=A... 154 3e-36 UniRef50_D2BPU5 Transcriptional regulator, RpiR family n=4 Tax=L... 154 3e-36 UniRef50_C7TGE4 Transcriptional regulator, RpiR family n=4 Tax=L... 153 4e-36 UniRef50_C3RLZ2 Transcriptional regulator n=3 Tax=Bacteria RepID... 153 4e-36 UniRef50_D1AJC9 Transcriptional regulator, RpiR family n=4 Tax=B... 153 5e-36 UniRef50_B0NY53 Putative uncharacterized protein n=1 Tax=Clostri... 153 5e-36 UniRef50_D0Z271 Transcriptional regulator n=6 Tax=Vibrionaceae R... 153 6e-36 UniRef50_B6QWT3 Putative transcriptional regulator protein n=1 T... 153 8e-36 UniRef50_C9XQF1 Phosphosugar-binding transcriptional regulator n... 153 8e-36 UniRef50_C9A974 Transcription regulator n=4 Tax=Enterococcus Rep... 153 9e-36 UniRef50_C8SN57 Transcriptional regulator, RpiR family n=1 Tax=M... 152 9e-36 UniRef50_A5LQQ9 Phosphosugar-binding transcriptional regulator, ... 152 1e-35 UniRef50_Q46SK2 Transcriptional regulator, RpiR family n=1 Tax=R... 152 2e-35 UniRef50_A6WYS0 Transcriptional regulator, RpiR family n=4 Tax=R... 152 2e-35 UniRef50_C2ECD8 Transcriptional regulator n=1 Tax=Lactobacillus ... 152 2e-35 UniRef50_Q2BDH7 RpiR-family transcriptional regulator n=1 Tax=Ba... 152 2e-35 UniRef50_C5J6W4 Transcriptional regulator n=1 Tax=Mycoplasma con... 152 2e-35 UniRef50_A1WL40 Transcriptional regulator, RpiR family n=1 Tax=V... 151 3e-35 UniRef50_C8WCY0 Transcriptional regulator, RpiR family n=3 Tax=Z... 150 3e-35 UniRef50_B8IEA9 Transcriptional regulator, RpiR family n=4 Tax=R... 150 3e-35 UniRef50_B9R3N6 SIS domain protein n=3 Tax=Alphaproteobacteria R... 150 4e-35 UniRef50_B9QTZ2 SIS domain protein n=2 Tax=Labrenzia RepID=B9QTZ... 150 4e-35 UniRef50_C2BXZ0 RpiR family transcriptional regulator n=4 Tax=Ba... 150 4e-35 UniRef50_Q98JM0 Mlr1883 protein n=2 Tax=Mesorhizobium RepID=Q98J... 150 4e-35 UniRef50_UPI000196ADBA hypothetical protein CATMIT_01190 n=1 Tax... 150 5e-35 UniRef50_C5F7B7 Phosphosugar-binding transcriptional regulator n... 150 6e-35 UniRef50_C6ATF5 Transcriptional regulator, RpiR family n=17 Tax=... 150 6e-35 UniRef50_Q1ZB96 Transcriptional regulator n=1 Tax=Photobacterium... 149 1e-34 UniRef50_Q2KXW9 Putative transcriptional regulator n=1 Tax=Borde... 149 1e-34 UniRef50_A5EGL2 Transcriptional regulator, RpiR family n=1 Tax=B... 149 1e-34 UniRef50_C1YQ52 Transcriptional regulator n=1 Tax=Nocardiopsis d... 148 2e-34 UniRef50_Q03C42 Transcriptional regulator n=1 Tax=Lactobacillus ... 148 2e-34 UniRef50_UPI00016A9B9D transcriptional regulator, RpiR family pr... 148 2e-34 UniRef50_Q1LZ65 RpiR-like protein n=27 Tax=Lactobacillales RepID... 148 3e-34 UniRef50_UPI00016C007A transcriptional regulator, RpiR family pr... 147 3e-34 UniRef50_B6GCS3 Putative uncharacterized protein n=1 Tax=Collins... 147 3e-34 UniRef50_A9IJZ1 Putative regulator (SIS family) n=4 Tax=Bordetel... 147 3e-34 UniRef50_C9AB15 Phosphosugar isomerase transcriptional regulator... 147 4e-34 UniRef50_Q1IJW8 Transcriptional regulator, RpiR family n=1 Tax=C... 147 5e-34 UniRef50_A6DXB0 SIS domain protein n=1 Tax=Roseovarius sp. TM103... 147 5e-34 UniRef50_A7FLM3 Transcriptional regulator, RpiR family n=47 Tax=... 147 5e-34 UniRef50_Q13FP6 Transcriptional regulator, RpiR family n=3 Tax=P... 147 6e-34 UniRef50_A2RL75 Putative HTH-type transcriptional regulator n=1 ... 147 6e-34 UniRef50_A8AMT2 Putative uncharacterized protein n=3 Tax=Enterob... 146 9e-34 UniRef50_C2FAJ3 RpiR family transcriptional regulator n=1 Tax=La... 146 1e-33 UniRef50_C7LIK3 Transcriptional regulator, RpiR family n=39 Tax=... 145 1e-33 UniRef50_B9J832 Transcriptional regulator protein n=1 Tax=Agroba... 145 1e-33 UniRef50_A8FAT4 Transcriptional regulator n=2 Tax=Bacillus RepID... 145 1e-33 UniRef50_C7RG92 Transcriptional regulator, RpiR family n=2 Tax=A... 145 2e-33 UniRef50_C2HLE6 Transcriptional regulator n=8 Tax=Lactobacillus ... 145 2e-33 UniRef50_B5I710 Transcriptional regulator n=6 Tax=Streptomyces R... 145 2e-33 UniRef50_A9BSK7 Transcriptional regulator, RpiR family n=4 Tax=B... 145 2e-33 UniRef50_C9A749 Putative uncharacterized protein n=1 Tax=Enteroc... 145 2e-33 UniRef50_C3RP07 Transcriptional regulator n=2 Tax=Bacteria RepID... 144 3e-33 UniRef50_UPI000196AB3E hypothetical protein CATMIT_01164 n=1 Tax... 144 3e-33 UniRef50_C3RH58 Predicted protein n=2 Tax=Bacteria RepID=C3RH58_... 144 3e-33 UniRef50_B1IEE2 Transcriptional regulator, RpiR family n=11 Tax=... 144 4e-33 UniRef50_A3PT11 Transcriptional regulator, RpiR family n=4 Tax=M... 144 4e-33 UniRef50_D2BNU6 Transcriptional regulator, RpiR family n=4 Tax=L... 144 4e-33 UniRef50_C2HN51 Transcriptional regulator n=7 Tax=Lactobacillus ... 143 4e-33 UniRef50_C7QJ71 Transcriptional regulator, RpiR family n=5 Tax=A... 143 4e-33 UniRef50_Q6F0H6 Putative transcriptional regulator n=1 Tax=Mesop... 143 5e-33 UniRef50_C1D3U9 Putative transcriptional regulator, RpiR family ... 143 7e-33 UniRef50_UPI000196AA29 hypothetical protein CATMIT_01879 n=1 Tax... 143 8e-33 UniRef50_B5H8Z9 Transcriptional regulator n=3 Tax=Streptomyces R... 143 8e-33 UniRef50_D1PQY5 RpiR-family transcriptional regulator n=1 Tax=Su... 143 8e-33 UniRef50_C9A1P4 Transcriptional regulator n=1 Tax=Enterococcus g... 143 9e-33 UniRef50_A3VFQ4 Putative transcriptional regulator protein n=1 T... 142 1e-32 UniRef50_C1IAG1 Predicted protein n=1 Tax=Clostridium sp. 7_2_43... 142 1e-32 UniRef50_C9XKC3 RpiR-family transcriptional regulator n=4 Tax=Cl... 142 1e-32 UniRef50_D0CS12 Transcriptional regulator, RpiR family n=1 Tax=S... 142 2e-32 UniRef50_C8P353 Putative uncharacterized protein n=1 Tax=Erysipe... 142 2e-32 UniRef50_A4NYS2 N-acetylneuraminate lyase n=2 Tax=Haemophilus in... 141 2e-32 UniRef50_C8SNA8 Transcriptional regulator, RpiR family n=2 Tax=M... 141 3e-32 UniRef50_Q1QYR8 Transcriptional regulator, RpiR family n=1 Tax=C... 141 3e-32 UniRef50_Q13RF5 Transcriptional regulator, RpiR family n=3 Tax=P... 141 3e-32 UniRef50_C1YMF9 Transcriptional regulator n=1 Tax=Nocardiopsis d... 141 3e-32 UniRef50_C9XKC4 RpiR-family transcriptional regulator n=3 Tax=Cl... 141 3e-32 UniRef50_C3RQD3 Predicted protein n=1 Tax=Mollicutes bacterium D... 141 3e-32 UniRef50_B5XW96 SIS domain protein n=11 Tax=Enterobacteriaceae R... 140 4e-32 UniRef50_A1VUM9 Transcriptional regulator, RpiR family n=4 Tax=C... 140 4e-32 UniRef50_Q1YL64 Possible transcriptional regulator n=1 Tax=Auran... 140 5e-32 UniRef50_B9KVH6 Transcriptional regulator, RpiR family n=2 Tax=R... 140 5e-32 UniRef50_C6CS19 Transcriptional regulator, RpiR family n=1 Tax=P... 140 6e-32 UniRef50_C7M1X3 Transcriptional regulator, RpiR family n=1 Tax=A... 140 6e-32 UniRef50_C7RFE2 Transcriptional regulator, RpiR family n=1 Tax=A... 140 6e-32 UniRef50_A4JPM3 Transcriptional regulator, RpiR family n=11 Tax=... 140 7e-32 UniRef50_C9M9T3 Putative SIS domain protein n=1 Tax=Jonquetella ... 139 1e-31 UniRef50_Q98AI2 Mlr5989 protein n=1 Tax=Mesorhizobium loti RepID... 139 1e-31 UniRef50_A6X385 Transcriptional regulator, RpiR family n=2 Tax=O... 139 1e-31 UniRef50_A3SJ61 SIS domain protein n=1 Tax=Roseovarius nubinhibe... 138 1e-31 UniRef50_A8IDV1 Transcriptional regulator n=1 Tax=Azorhizobium c... 138 2e-31 UniRef50_C7T7R2 Transcriptional regulator, RpiR family n=7 Tax=L... 138 2e-31 UniRef50_C3RLW4 Predicted protein n=3 Tax=Bacteria RepID=C3RLW4_... 138 2e-31 UniRef50_C9Q7M3 Transcriptional regulator n=2 Tax=Vibrio RepID=C... 138 3e-31 UniRef50_Q4A886 Transcriptional regulator n=5 Tax=Mycoplasma hyo... 138 3e-31 UniRef50_C8PCG0 Transcriptional regulator n=2 Tax=Lactobacillus ... 137 3e-31 UniRef50_C6BI14 Transcriptional regulator, RpiR family n=6 Tax=R... 137 3e-31 UniRef50_B1R0N4 SIS domain protein n=2 Tax=Clostridium butyricum... 137 5e-31 UniRef50_UPI0001909264 RpiR family transcriptional regulator n=1... 137 5e-31 UniRef50_A4VW77 Transcriptional regulator n=1 Tax=Streptococcus ... 137 5e-31 UniRef50_Q1GH80 Transcriptional regulator, RpiR family n=6 Tax=R... 136 7e-31 UniRef50_Q03HM4 Transcriptional regulator n=1 Tax=Pediococcus pe... 136 9e-31 UniRef50_Q6A765 Transcriptional regulator, RpiR family n=3 Tax=P... 136 1e-30 UniRef50_D2BP23 Transcriptional regulator, RpiR family n=3 Tax=L... 135 1e-30 UniRef50_UPI0001AF5353 RpiR family transcriptional regulator n=1... 135 1e-30 UniRef50_C3WCJ9 Predicted protein n=1 Tax=Fusobacterium mortifer... 135 1e-30 UniRef50_C1YLY0 Transcriptional regulator n=1 Tax=Nocardiopsis d... 135 1e-30 UniRef50_C9A748 Transcriptional regulator n=1 Tax=Enterococcus c... 135 2e-30 UniRef50_Q7D403 Transcriptional regulator, RpiR family n=2 Tax=A... 135 2e-30 UniRef50_A3K8P8 Sugar isomerase (SIS) n=2 Tax=Rhodobacteraceae R... 135 2e-30 UniRef50_A6TPC3 Transcriptional regulator, RpiR family n=1 Tax=A... 135 2e-30 UniRef50_UPI000196AA26 hypothetical protein CATMIT_01876 n=1 Tax... 134 4e-30 UniRef50_B5G8P1 Transcriptional regulator (Fragment) n=1 Tax=Str... 134 4e-30 UniRef50_Q11LZ5 Transcriptional regulator, RpiR family n=1 Tax=C... 133 4e-30 UniRef50_C2DZ33 Transcriptional regulator n=9 Tax=Lactobacillus ... 133 5e-30 UniRef50_B8DD88 Phosphosugar-binding protein n=16 Tax=Listeria m... 133 6e-30 UniRef50_C2EN35 RpiR family transcriptional regulator n=1 Tax=La... 133 7e-30 UniRef50_C4FYW5 Putative uncharacterized protein n=2 Tax=Abiotro... 133 8e-30 UniRef50_UPI000050FE27 transcriptional regulator, RpiR family pr... 133 9e-30 UniRef50_D1AGI8 Transcriptional regulator, RpiR family n=1 Tax=S... 132 1e-29 UniRef50_A0K0Z5 Transcriptional regulator, RpiR family n=3 Tax=M... 132 1e-29 UniRef50_Q8EWN1 Transcriptional regulator n=1 Tax=Mycoplasma pen... 132 2e-29 UniRef50_C1I6H5 Predicted protein n=1 Tax=Clostridium sp. 7_2_43... 132 2e-29 UniRef50_Q14NM0 Hypothetical transmembrane protein n=1 Tax=Spiro... 131 2e-29 UniRef50_A3PQG1 Transcriptional regulator, RpiR family n=6 Tax=R... 131 3e-29 UniRef50_B2JHA3 Transcriptional regulator, RpiR family n=5 Tax=B... 131 3e-29 UniRef50_Q12C10 Transcriptional regulator, RpiR family n=2 Tax=C... 131 3e-29 UniRef50_A8U5R1 RpiR-family transcriptional regulator n=2 Tax=Ba... 130 4e-29 UniRef50_C0D3Y2 Putative uncharacterized protein (Fragment) n=1 ... 129 9e-29 UniRef50_A0AGT3 Complete genome n=1 Tax=Listeria welshimeri sero... 129 1e-28 UniRef50_C7LLS0 Transcriptional regulator, RpiR family protein n... 129 1e-28 UniRef50_A6W9S6 Transcriptional regulator, RpiR family n=1 Tax=K... 128 1e-28 UniRef50_UPI000196CB04 hypothetical protein CATMIT_02765 n=1 Tax... 128 1e-28 UniRef50_Q930C4 Transcriptional regulator, RpiR family n=1 Tax=S... 128 1e-28 UniRef50_A8LRZ7 Transcriptional regulator n=2 Tax=Rhodobacterale... 128 1e-28 UniRef50_C2K0T0 Possible transcriptional regulator n=2 Tax=Lacto... 128 2e-28 UniRef50_A1RA62 Putative SIS (Sugar ISomerase) domain protein n=... 128 2e-28 UniRef50_A7MI97 Putative uncharacterized protein n=3 Tax=Enterob... 128 2e-28 UniRef50_D0ALV4 Transcriptional regulator (Fragment) n=2 Tax=Ent... 128 3e-28 UniRef50_Q2ST84 Phosphosugar-binding transcriptional regulator, ... 128 3e-28 UniRef50_A6M3E6 Transcriptional regulator, RpiR family n=1 Tax=C... 127 3e-28 UniRef50_A6VSF8 Transcriptional regulator, RpiR family n=4 Tax=G... 127 3e-28 UniRef50_A4FJ87 Transcriptional regulator, RpiR family n=1 Tax=S... 127 4e-28 UniRef50_B6GDB9 Putative uncharacterized protein n=1 Tax=Collins... 127 4e-28 UniRef50_C4XDS0 Putative uncharacterized protein n=1 Tax=Mycopla... 127 4e-28 UniRef50_C9A505 Transcriptional regulator n=4 Tax=Enterococcus R... 127 4e-28 UniRef50_A0QRN2 Transcriptional regulator n=1 Tax=Mycobacterium ... 127 5e-28 UniRef50_B9CKY1 Transcriptional regulator, RpiR family protein n... 127 6e-28 UniRef50_Q1GL90 Transcriptional regulator, RpiR family n=9 Tax=R... 127 7e-28 UniRef50_B7QTT1 Transcriptional regulator, rpir family n=2 Tax=R... 126 7e-28 UniRef50_C3RJ80 Predicted protein n=3 Tax=Bacteria RepID=C3RJ80_... 125 2e-27 UniRef50_B1IED4 SIS domain protein n=10 Tax=Clostridium RepID=B1... 125 2e-27 UniRef50_Q1AYI2 Transcriptional regulator, RpiR family n=17 Tax=... 125 2e-27 UniRef50_Q7MJB4 Transcriptional regulator n=3 Tax=Vibrio RepID=Q... 124 3e-27 UniRef50_A3K9H4 Putative uncharacterized protein n=1 Tax=Sagittu... 124 4e-27 UniRef50_UPI00016A65F3 transcriptional regulator, RpiR family pr... 123 5e-27 UniRef50_A1A2Z7 Putative RpiR-family transcriptional regulatory ... 123 6e-27 UniRef50_A0K0I4 Transcriptional regulator, RpiR family n=1 Tax=A... 123 8e-27 UniRef50_C4L7E2 Transcriptional regulator, RpiR family n=1 Tax=T... 122 1e-26 UniRef50_B6G7Y4 Putative uncharacterized protein n=1 Tax=Collins... 122 2e-26 UniRef50_C4ICI5 Transcriptional regulator, RpiR family n=2 Tax=C... 121 2e-26 UniRef50_UPI00016AAD50 transcriptional regulator, RpiR family pr... 121 3e-26 UniRef50_C9N979 Transcriptional regulator, RpiR family n=2 Tax=S... 121 3e-26 UniRef50_Q0FH55 Sugar isomerase (SIS) n=2 Tax=Rhodobacteraceae R... 121 4e-26 UniRef50_Q6XYV4 Transcriptional regulator n=2 Tax=Spiroplasma Re... 120 4e-26 UniRef50_Q041A4 Transcriptional regulator n=8 Tax=Lactobacillus ... 120 5e-26 UniRef50_Q1QYQ3 Transcriptional regulator, RpiR family n=1 Tax=C... 120 7e-26 UniRef50_A4EA48 Putative uncharacterized protein n=1 Tax=Collins... 119 1e-25 UniRef50_Q4A7H2 Putative uncharacterized protein n=6 Tax=Mycopla... 118 2e-25 UniRef50_A9DTL4 Transcriptional regulator, RpiR family protein n... 118 2e-25 UniRef50_A8GDB9 Transcriptional regulator, RpiR family n=1 Tax=S... 118 3e-25 UniRef50_Q0FJM2 Putative uncharacterized protein n=1 Tax=Roseova... 117 3e-25 UniRef50_O27589 Conserved protein n=6 Tax=Methanobacteriaceae Re... 116 7e-25 UniRef50_Q15U63 Transcriptional regulator, RpiR family n=1 Tax=P... 116 7e-25 UniRef50_UPI0001C35662 hypothetical protein ChatD1_20770 n=1 Tax... 116 9e-25 UniRef50_Q8U472 Hexulose-6-phosphate synthase (D-arabino 3-hexul... 116 1e-24 UniRef50_C3RNI1 Predicted protein n=2 Tax=Bacteria RepID=C3RNI1_... 115 2e-24 UniRef50_D2Q6J1 Sugar isomerase or sugar amino transferase n=6 T... 115 2e-24 UniRef50_Q7MCJ0 Transcriptional regulator n=4 Tax=Vibrionaceae R... 115 2e-24 UniRef50_B9Y5H0 Putative uncharacterized protein n=1 Tax=Holdema... 114 3e-24 UniRef50_D0D8D8 Transcriptional regulator, RpiR family n=1 Tax=C... 114 3e-24 UniRef50_A6M2T4 Transcriptional regulator, RpiR family n=3 Tax=C... 114 4e-24 UniRef50_C4X1H8 Putative uncharacterized protein n=3 Tax=Klebsie... 114 4e-24 UniRef50_B0N144 Putative uncharacterized protein n=2 Tax=Bacteri... 114 4e-24 UniRef50_C3RLJ5 Transcriptional regulator n=2 Tax=Bacteria RepID... 113 7e-24 UniRef50_C0X7I6 Phosphosugar-binding transcriptional regulator n... 113 7e-24 UniRef50_O67500 Uncharacterized phosphosugar isomerase aq_1546 n... 113 1e-23 UniRef50_D2TXX6 Hex regulon repressor (RpiR-family transcription... 112 1e-23 UniRef50_Q88GX5 Transcriptional regulator, RpiR family n=7 Tax=P... 112 2e-23 UniRef50_C4ICA8 SIS domain protein n=2 Tax=Clostridium butyricum... 112 2e-23 UniRef50_A4X3Y2 Helix-turn-helix protein RpiR n=3 Tax=Actinomyce... 112 2e-23 UniRef50_B0N1U0 Putative uncharacterized protein n=3 Tax=Bacteri... 112 2e-23 UniRef50_B5I9S2 SIS domain protein n=2 Tax=Aciduliprofundum boon... 111 2e-23 UniRef50_Q14LK5 Hypothetical transmembrane protein n=1 Tax=Spiro... 111 2e-23 UniRef50_C8S7V2 6-phospho 3-hexuloisomerase n=1 Tax=Ferroglobus ... 111 3e-23 UniRef50_Q89R61 Bll2911 protein n=1 Tax=Bradyrhizobium japonicum... 111 3e-23 UniRef50_Q0RUQ9 Possible 6-phospho-3-hexuloisomerase n=3 Tax=Rho... 111 3e-23 UniRef50_C8S1A0 Transcriptional regulator, RpiR family n=1 Tax=R... 111 3e-23 UniRef50_C3RMD5 Transcriptional regulator (Fragment) n=2 Tax=Bac... 111 3e-23 UniRef50_B0N5S7 Putative uncharacterized protein n=2 Tax=Bacteri... 110 5e-23 UniRef50_C6A1J9 Bifunctional D-arabino 3-hexulose-6-phosphate fo... 110 6e-23 UniRef50_Q2NVC3 Putative uncharacterized protein n=1 Tax=Sodalis... 109 1e-22 UniRef50_D1S1T7 Transcriptional regulator, RpiR family n=3 Tax=A... 109 1e-22 UniRef50_B5H4P8 Predicted protein n=4 Tax=Streptomyces RepID=B5H... 108 1e-22 UniRef50_C9D0H7 Putative transcriptional regulator RpiR family p... 108 2e-22 UniRef50_C9AU51 Predicted protein n=2 Tax=Enterococcus casselifl... 108 2e-22 UniRef50_B0VH11 Carbohydrate isomerase, KpsF/GutQ family n=1 Tax... 108 3e-22 UniRef50_C2BZN1 RpiR family transcriptional regulator n=1 Tax=Li... 107 3e-22 UniRef50_Q47334 Polysialic acid capsule expression protein kpsF ... 107 4e-22 UniRef50_C3WG43 SIS domain-containing protein n=1 Tax=Fusobacter... 107 4e-22 UniRef50_A0P1C3 SIS domain protein n=2 Tax=Rhodobacteraceae RepI... 107 5e-22 UniRef50_D2RHI3 6-phospho 3-hexuloisomerase n=1 Tax=Archaeoglobu... 107 5e-22 UniRef50_C3RLV2 Predicted protein n=2 Tax=Bacteria RepID=C3RLV2_... 107 6e-22 UniRef50_A1WQC0 Transcriptional regulator, RpiR family n=1 Tax=V... 107 7e-22 UniRef50_Q14PH5 Conserved hypothetical containing isomerase doma... 107 7e-22 UniRef50_B5XTC8 Transcriptional regulator, RpiR family n=6 Tax=E... 106 7e-22 UniRef50_O28478 Uncharacterized protein AF_1796 n=1 Tax=Archaeog... 106 8e-22 UniRef50_C7LLH6 SIS domain protein n=3 Tax=Mycoplasma mycoides g... 106 1e-21 UniRef50_C6JMB7 Polysialic acid capsule expression protein kpsF ... 106 1e-21 UniRef50_C1RI47 Transcriptional regulator n=1 Tax=Cellulomonas f... 106 1e-21 UniRef50_A5V7B7 Transcriptional regulator, RpiR family n=1 Tax=S... 106 1e-21 UniRef50_C1I4S5 Putative uncharacterized protein n=1 Tax=Clostri... 106 1e-21 UniRef50_C1TKE5 KpsF/GutQ family protein n=1 Tax=Dethiosulfovibr... 105 1e-21 UniRef50_C5D0V0 Transcriptional regulator, RpiR family n=1 Tax=V... 105 2e-21 UniRef50_C6VIW0 Transcription regulator n=3 Tax=Lactobacillus pl... 105 2e-21 UniRef50_C3RJC2 Predicted protein n=2 Tax=Bacteria RepID=C3RJC2_... 104 4e-21 UniRef50_A1SXE5 DNA-binding helix-turn-helix domain-containing t... 103 5e-21 UniRef50_C9AU43 Putative uncharacterized protein n=3 Tax=Enteroc... 103 5e-21 UniRef50_A9EFQ3 SIS domain protein n=2 Tax=Rhodobacteraceae RepI... 103 7e-21 UniRef50_C1A8V3 Arabinose 5-phosphate isomerase n=1 Tax=Gemmatim... 103 8e-21 UniRef50_Q0C3E7 Sugar isomerase, KpsF/GutQ family n=2 Tax=Alphap... 103 8e-21 UniRef50_C7M027 Transcriptional regulator, RpiR family n=1 Tax=A... 103 9e-21 UniRef50_A4GJ53 Putative KpsF/GutQ n=1 Tax=uncultured marine Nit... 103 1e-20 UniRef50_Q04HE6 Hexulose-6-phosphate isomerase n=6 Tax=Firmicute... 103 1e-20 UniRef50_UPI0001C354ED RpiR family transcriptional regulator n=1... 102 1e-20 UniRef50_Q9LBW5 3-hexulose-6-phosphate isomerase n=2 Tax=Actinom... 102 2e-20 UniRef50_B0BZZ6 Sugar isomerase, KpsF/GutQ family n=1 Tax=Acaryo... 101 2e-20 UniRef50_A6X2Q6 Transcriptional regulator, RpiR family n=1 Tax=O... 101 2e-20 UniRef50_O26351 Uncharacterized protein MTH_249 n=1 Tax=Methanot... 101 2e-20 UniRef50_D1PR02 Transcriptional regulator, RpiR family n=1 Tax=S... 101 2e-20 UniRef50_A0LE58 KpsF/GutQ family protein n=8 Tax=Bacteria RepID=... 101 4e-20 UniRef50_B6WAA6 Putative uncharacterized protein n=1 Tax=Anaeroc... 100 5e-20 UniRef50_B0SHW1 Sugar phosphate isomerase n=6 Tax=Leptospira Rep... 100 6e-20 UniRef50_B3E057 Arabinose 5-phosphate isomerase and CBS domains ... 100 7e-20 UniRef50_C2JQK2 Phosphosugar-binding transcriptional regulator n... 100 7e-20 UniRef50_Q6MPN9 Polysialic acid capsule expression protein n=1 T... 100 7e-20 UniRef50_Q9YAK0 Uncharacterized protein APE_1940.1 n=23 Tax=Ther... 100 7e-20 UniRef50_C8ZXB1 Putative uncharacterized protein n=4 Tax=Enteroc... 100 8e-20 UniRef50_C9LT74 Arabinose 5-phosphate isomerase n=2 Tax=Bacteria... 100 8e-20 UniRef50_B4RJ65 KpsF n=58 Tax=Bacteria RepID=B4RJ65_NEIG2 100 8e-20 UniRef50_C0AWM1 Putative uncharacterized protein n=1 Tax=Proteus... 100 8e-20 UniRef50_C9AA73 Predicted protein n=1 Tax=Enterococcus casselifl... 100 9e-20 UniRef50_B1C5Y4 Putative uncharacterized protein n=1 Tax=Anaerof... 99 1e-19 UniRef50_Q6AQ42 Related to polysialic acid capsule expression pr... 99 1e-19 UniRef50_B6IXW6 Sugar isomerase, KpsF n=1 Tax=Rhodospirillum cen... 99 1e-19 UniRef50_A1RZ63 Glutamine amidotransferase, class-II n=1 Tax=The... 99 2e-19 UniRef50_Q048M7 Transcriptional regulator n=2 Tax=Lactobacillus ... 99 2e-19 UniRef50_Q2LUX9 Arabinose-5-phosphate isomerase n=1 Tax=Syntroph... 99 2e-19 UniRef50_A4FI47 Transcriptional regulator, RpiR family n=2 Tax=P... 99 2e-19 UniRef50_D2RHI7 Sugar isomerase (SIS) n=1 Tax=Archaeoglobus prof... 99 2e-19 UniRef50_Q03Y13 Sugar phosphate isomerase with CBS domains n=6 T... 99 2e-19 UniRef50_B3QSH3 KpsF/GutQ family protein n=1 Tax=Chloroherpeton ... 99 2e-19 UniRef50_D1U3G0 KpsF/GutQ family protein n=1 Tax=Desulfovibrio a... 99 2e-19 UniRef50_A4INF7 Predicted sugar phosphate aminotransferaseinvolv... 99 2e-19 UniRef50_A0B0Z7 Transcriptional regulator, RpiR family n=68 Tax=... 99 2e-19 UniRef50_Q3ATD5 KpsF/GutQ n=10 Tax=Chlorobiaceae RepID=Q3ATD5_CHLCH 99 3e-19 UniRef50_D1B671 KpsF/GutQ family protein n=2 Tax=Synergistaceae ... 98 3e-19 UniRef50_Q0W0H5 Putative hexulose-6-phosphate isomerase n=1 Tax=... 98 3e-19 UniRef50_Q0BL14 Arabinose-5-phosphate isomerase n=20 Tax=Gammapr... 98 3e-19 UniRef50_B8CZC0 KpsF/GutQ family protein n=4 Tax=Bacteria RepID=... 98 4e-19 UniRef50_C2CUT9 Possible glucose-6-phosphate isomerase n=1 Tax=G... 98 4e-19 UniRef50_B0PES3 Putative uncharacterized protein n=1 Tax=Anaerot... 98 4e-19 UniRef50_Q0RXZ1 Possible transcriptional regulator n=1 Tax=Rhodo... 98 4e-19 UniRef50_C6AWU1 Transcriptional regulator, RpiR family n=11 Tax=... 97 5e-19 UniRef50_C6DIN8 KpsF/GutQ family protein n=10 Tax=Enterobacteria... 97 6e-19 UniRef50_Q1Q2H0 Putative uncharacterized protein n=1 Tax=Candida... 97 6e-19 UniRef50_P45313 Probable phosphosugar isomerase HI1678 n=43 Tax=... 97 6e-19 UniRef50_D1PYZ2 Arabinose 5-phosphate isomerase n=9 Tax=Prevotel... 97 6e-19 UniRef50_A6NTR6 Putative uncharacterized protein n=2 Tax=Bacteri... 97 6e-19 UniRef50_C7NES0 KpsF/GutQ family protein n=6 Tax=Fusobacteriacea... 97 7e-19 UniRef50_Q5JH71 Glucosamine--fructose-6-phosphate aminotransfera... 97 7e-19 UniRef50_Q1Q5Y0 Conserved hypothetical sugar phosphate isomerase... 97 7e-19 UniRef50_B1L7C4 Sugar isomerase (SIS) n=1 Tax=Candidatus Korarch... 97 8e-19 UniRef50_Q4FNC0 Arabinose 5-phosphate isomerase n=3 Tax=Candidat... 97 8e-19 UniRef50_Q1IST9 KpsF/GutQ family protein n=5 Tax=Bacteria RepID=... 97 8e-19 UniRef50_Q8TUU0 Predicted sugar phosphate isomerase n=1 Tax=Meth... 96 1e-18 UniRef50_Q4J6D9 Glucosamine--fructose-6-phosphate aminotransfera... 96 1e-18 UniRef50_C6VU42 KpsF/GutQ family protein n=3 Tax=Sphingobacteria... 96 1e-18 UniRef50_Q8D1Q8 Arabinose 5-phosphate isomerase n=525 Tax=cellul... 96 1e-18 UniRef50_C3RQ42 Predicted protein n=2 Tax=Bacteria RepID=C3RQ42_... 96 1e-18 UniRef50_D0ZGM2 Sugar isomerase (SIS) n=5 Tax=Enterobacteriaceae... 96 1e-18 UniRef50_Q2GAE9 KpsF/GutQ family protein n=1 Tax=Novosphingobium... 96 1e-18 UniRef50_A8IPW3 Sugar isomerase n=58 Tax=Bacteria RepID=A8IPW3_A... 96 1e-18 UniRef50_A3DPP9 Glutamine--fructose-6-phosphate transaminase n=1... 96 2e-18 UniRef50_D1TFW4 Putative transcriptional regulator, RpiR family ... 95 2e-18 UniRef50_Q2RYH6 KpsF/GutQ n=64 Tax=Proteobacteria RepID=Q2RYH6_R... 95 2e-18 UniRef50_C6X0T7 Arabinose 5-phosphate isomerase n=2 Tax=Flavobac... 95 2e-18 UniRef50_A8TDJ4 Glucosamine--fructose-6-phosphate aminotransfera... 95 2e-18 UniRef50_A6M3A2 Transcriptional regulator, RpiR family n=3 Tax=C... 95 2e-18 UniRef50_B0RAL7 6-phospho-3-hexuloisomerase n=3 Tax=Micrococcine... 95 2e-18 UniRef50_Q3JP70 Arabinose-5-phosphate isomerase n=5 Tax=Proteoba... 95 3e-18 UniRef50_A3CVN6 Hexulose-6-phosphate isomerase n=6 Tax=Methanomi... 95 3e-18 UniRef50_C9B1X5 Putative uncharacterized protein n=2 Tax=Enteroc... 94 4e-18 UniRef50_C3RK04 Predicted protein n=2 Tax=Bacteria RepID=C3RK04_... 94 4e-18 UniRef50_A9A435 Glucosamine--fructose-6-phosphate aminotransfera... 94 4e-18 UniRef50_D2R6F2 KpsF/GutQ family protein n=1 Tax=Pirellula stale... 94 5e-18 UniRef50_D1AIY1 KpsF/GutQ family protein n=11 Tax=Fusobacteriace... 94 5e-18 UniRef50_B1CBZ6 Putative uncharacterized protein n=1 Tax=Anaerof... 94 5e-18 UniRef50_Q1ZIS3 GutQ protein n=1 Tax=Psychromonas sp. CNPT3 RepI... 94 5e-18 UniRef50_Q96XH0 581aa long hypothetical glucosamine--fructose-6-... 94 6e-18 UniRef50_C2DAD6 3-hexulose-6-phosphate isomerase n=2 Tax=Enteroc... 94 6e-18 UniRef50_B4U6U7 KpsF/GutQ family protein n=1 Tax=Hydrogenobaculu... 94 6e-18 UniRef50_B6W753 Putative uncharacterized protein n=1 Tax=Anaeroc... 94 7e-18 UniRef50_Q3B0E2 KpsF/GutQ n=16 Tax=Cyanobacteria RepID=Q3B0E2_SYNS9 94 7e-18 UniRef50_Q1CZW3 GutQ protein n=6 Tax=Cystobacterineae RepID=Q1CZ... 94 8e-18 UniRef50_B6BVE7 Arabinose 5-phosphate isomerase n=1 Tax=beta pro... 94 8e-18 UniRef50_A3ZL92 Putative uncharacterized protein n=1 Tax=Blastop... 93 9e-18 UniRef50_Q2FSA6 Hexulose-6-phosphate isomerase n=1 Tax=Methanosp... 93 9e-18 UniRef50_Q1RR96 Putative 6-phospho-3-hexuloisomerase n=1 Tax=Str... 93 9e-18 UniRef50_C8W8B6 Sugar isomerase (SIS) n=13 Tax=Bacteria RepID=C8... 93 9e-18 UniRef50_A1RWB5 Glutamine--fructose-6-phosphate transaminase n=1... 93 1e-17 UniRef50_C0BZ30 Putative uncharacterized protein n=1 Tax=Clostri... 93 1e-17 UniRef50_C3HBK2 Glucosamine--fructose-6-phosphate aminotransfera... 93 1e-17 UniRef50_B9KF21 Arabinose-5-phosphate isomerase n=29 Tax=Bacteri... 93 1e-17 UniRef50_Q6F0Y2 Putative uncharacterized protein n=1 Tax=Mesopla... 93 1e-17 UniRef50_Q723E8 SIS domain protein n=15 Tax=Firmicutes RepID=Q72... 93 1e-17 UniRef50_Q9F5F9 Riorf33 protein n=1 Tax=Agrobacterium rhizogenes... 92 1e-17 UniRef50_B2KC19 KpsF/GutQ family protein n=1 Tax=Elusimicrobium ... 92 2e-17 UniRef50_C1PA35 Sugar isomerase (SIS) n=1 Tax=Bacillus coagulans... 92 2e-17 UniRef50_A5IWG2 Hexulose-6-phosphate isomerase n=67 Tax=Staphylo... 92 2e-17 UniRef50_B6ARK4 Sugar isomerase, KpsF/GutQ family n=3 Tax=Bacter... 92 2e-17 UniRef50_C2DAE3 3-hexulose-6-phosphate isomerase n=7 Tax=Enteroc... 92 2e-17 UniRef50_B0N682 Putative uncharacterized protein n=2 Tax=Bacteri... 92 3e-17 UniRef50_Q1MS86 FOG: CBS domain n=10 Tax=Desulfovibrionales RepI... 92 3e-17 UniRef50_C7TGG9 Phosphosugar isomerase n=4 Tax=Lactobacillus Rep... 92 3e-17 UniRef50_C1B3M0 Putative RpiR family transcriptional regulator n... 92 3e-17 UniRef50_A5VEU9 KpsF/GutQ family protein n=2 Tax=Sphingomonas wi... 92 3e-17 UniRef50_C1NBK9 KpsF/GutQ family protein n=1 Tax=Escherichia sp.... 91 3e-17 UniRef50_A6CXK8 D-arabinose 5-phosphate isomerase n=1 Tax=Vibrio... 91 3e-17 UniRef50_Q9Z826 Uncharacterized protein CPn_0526/CP_0226/CPj0526... 91 4e-17 UniRef50_C6QLS8 6-phospho 3-hexuloisomerase n=2 Tax=Geobacillus ... 91 4e-17 UniRef50_C6I0S8 Sugar isomerase, KpsF/GutQ family protein n=1 Ta... 91 4e-17 UniRef50_Q10ZT6 KpsF/GutQ family protein n=1 Tax=Trichodesmium e... 91 4e-17 UniRef50_A7VQ52 Putative uncharacterized protein n=1 Tax=Clostri... 91 5e-17 UniRef50_C5A3S6 Glucosamine--fructose-6-phosphate aminotransfera... 90 5e-17 UniRef50_A8RAB2 Putative uncharacterized protein n=1 Tax=Eubacte... 90 6e-17 UniRef50_D0LJS5 KpsF/GutQ family protein n=1 Tax=Haliangium ochr... 90 7e-17 UniRef50_Q30U66 Sugar isomerase (SIS) n=2 Tax=Helicobacteraceae ... 90 7e-17 UniRef50_C8SIC4 Sugar isomerase (SIS) n=1 Tax=Mesorhizobium oppo... 90 7e-17 UniRef50_C2KEC0 SIS domain protein n=2 Tax=Lactobacillus RepID=C... 90 7e-17 UniRef50_D1C5T9 Glutamine--fructose-6-phosphate transaminase (Is... 90 7e-17 UniRef50_Q58815 Mja gf6p intein n=17 Tax=cellular organisms RepI... 90 7e-17 UniRef50_Q8EMY6 Hypothetical conserved protein n=1 Tax=Oceanobac... 90 8e-17 UniRef50_D0RRD5 Arabinose 5-phosphate isomerase n=2 Tax=alpha pr... 90 9e-17 UniRef50_C1I9S8 Transcriptional regulator n=1 Tax=Clostridium sp... 89 1e-16 UniRef50_Q11YC7 Sugar phosphate isomerase, KpsF/GutQ family n=27... 89 1e-16 UniRef50_Q5HRH6 SIS domain protein n=6 Tax=Staphylococcus epider... 89 2e-16 UniRef50_Q467C4 Hexulose-6-phosphate isomerase n=4 Tax=Methanosa... 89 2e-16 UniRef50_B5JQT0 Sugar isomerase, KpsF/GutQ family n=1 Tax=Verruc... 89 2e-16 UniRef50_A5EVJ8 Arabinose 5-phosphate isomerase n=1 Tax=Dichelob... 89 2e-16 UniRef50_Q0FF93 KpsF/GutQ family protein n=1 Tax=Rhodobacterales... 89 2e-16 UniRef50_B7UNE8 Predicted phosphosugar isomerase n=12 Tax=cellul... 89 2e-16 UniRef50_A4THA2 Phosphosugar isomerase/binding protein n=30 Tax=... 89 2e-16 UniRef50_B0NET0 Putative uncharacterized protein n=2 Tax=Clostri... 89 2e-16 UniRef50_D1PQW6 Transcriptional regulator, RpiR family n=1 Tax=S... 89 2e-16 UniRef50_D1Y338 Arabinose 5-phosphate isomerase n=1 Tax=Pyramido... 89 2e-16 UniRef50_A8MC94 Glutamine amidotransferase class-II n=1 Tax=Cald... 88 3e-16 UniRef50_B1Y4W5 Transcriptional regulator, RpiR family n=1 Tax=L... 88 3e-16 UniRef50_A7B0I1 Putative uncharacterized protein n=1 Tax=Ruminoc... 88 4e-16 UniRef50_Q9WXZ5 Glucosamine--fructose-6-phosphate aminotransfera... 88 4e-16 UniRef50_C3RNG5 Predicted protein n=3 Tax=Bacteria RepID=C3RNG5_... 88 4e-16 UniRef50_A3VSH4 Arabinose 5-phosphate isomerase n=1 Tax=Parvular... 87 5e-16 UniRef50_UPI000196BAB9 hypothetical protein CATMIT_00189 n=1 Tax... 87 6e-16 UniRef50_D2PN41 Arabinose-5-phosphate isomerase n=1 Tax=Kribbell... 87 6e-16 UniRef50_C3RI60 Predicted protein n=2 Tax=Bacteria RepID=C3RI60_... 87 6e-16 UniRef50_C5CFI6 Glutamine--fructose-6-phosphate transaminase (Is... 87 6e-16 UniRef50_D1AJ20 6-phospho 3-hexuloisomerase n=2 Tax=Bacteria Rep... 87 7e-16 UniRef50_A5VTJ4 Sugar isomerase, KpsF/GutQ n=36 Tax=Rhizobiales ... 87 8e-16 UniRef50_UPI000058959B transcriptional regulator n=1 Tax=Staphyl... 87 8e-16 UniRef50_B4TE86 6-phospho 3-hexuloisomerase n=8 Tax=Enterobacter... 87 9e-16 UniRef50_B1LR09 Sugar isomerase, KpsF/GutQ family n=21 Tax=Bacte... 87 1e-15 UniRef50_A6VUC5 KpsF/GutQ family protein n=12 Tax=Bacteria RepID... 86 1e-15 UniRef50_C3RJM3 Predicted protein n=2 Tax=Bacteria RepID=C3RJM3_... 86 1e-15 UniRef50_Q8D2M7 YrbH protein n=1 Tax=Wigglesworthia glossinidia ... 86 1e-15 UniRef50_C0QVG6 D-arabinose-5-phosphate isomerase n=1 Tax=Brachy... 86 1e-15 UniRef50_C1QDK1 KpsF/GutQ family protein n=1 Tax=Brachyspira mur... 86 1e-15 UniRef50_Q9YCQ6 Glucosamine--fructose-6-phosphate aminotransfera... 86 1e-15 UniRef50_B9KZ32 Glucosamine--fructose-6-phosphate aminotransfera... 86 1e-15 UniRef50_C2KEC1 3-hexulose-6-phosphate isomerase n=2 Tax=Lactoba... 86 1e-15 UniRef50_B1I1Y6 Glucosamine--fructose-6-phosphate aminotransfera... 86 2e-15 UniRef50_C0W508 RpiR family transcriptional regulator n=1 Tax=Ac... 86 2e-15 UniRef50_Q6ET44 Os02g0158300 protein n=7 Tax=Magnoliophyta RepID... 85 2e-15 UniRef50_A1VGM9 KpsF/GutQ family protein n=1 Tax=Desulfovibrio v... 85 3e-15 UniRef50_Q9ZD42 Uncharacterized protein RP505 n=16 Tax=cellular ... 85 4e-15 UniRef50_C9KLZ5 3-hexulose-6-phosphate isomerase n=1 Tax=Mitsuok... 84 4e-15 UniRef50_Q9M1T1 Sugar-phosphate isomerase-like protein n=10 Tax=... 84 4e-15 UniRef50_Q7UL04 Putative uncharacterized protein n=1 Tax=Rhodopi... 84 4e-15 UniRef50_C6JKU7 Putative uncharacterized protein n=2 Tax=Fusobac... 84 4e-15 UniRef50_O26273 Glucosamine--fructose-6-phosphate aminotransfera... 84 5e-15 UniRef50_B1L6C6 Glutamine--fructose-6-phosphate transaminase (Is... 84 5e-15 UniRef50_C3MFV3 Sugar isomerase, KpsF/GutQ family protein n=8 Ta... 84 5e-15 UniRef50_D1NAS0 KpsF/GutQ family protein n=1 Tax=Victivallis vad... 84 5e-15 UniRef50_C9YDK4 Putative uncharacterized protein n=1 Tax=Curviba... 84 6e-15 UniRef50_UPI00019F1EA3 transcriptional regulator, RpiR family pr... 84 7e-15 UniRef50_D0XK10 KpsF/GutQ family protein n=1 Tax=Brevundimonas s... 84 7e-15 UniRef50_C1ZGN7 KpsF/GutQ family protein n=1 Tax=Planctomyces li... 84 7e-15 UniRef50_B4TGU2 3-hexulose-6-phosphate isomerase n=6 Tax=Bacteri... 84 8e-15 UniRef50_Q1N8R1 Sugar isomerase, KpsF/GutQ n=1 Tax=Sphingomonas ... 83 1e-14 UniRef50_C9KTU4 Arabinose 5-phosphate isomerase n=31 Tax=Bactero... 83 1e-14 UniRef50_A5FSX5 Sugar isomerase (SIS) n=2 Tax=Dehalococcoides Re... 83 1e-14 UniRef50_Q3Z924 Glucosamine--fructose-6-phosphate aminotransfera... 83 1e-14 >UniRef50_C7MQM6 Transcriptional regulator, RpiR family n=5 Tax=Actinomycetales RepID=C7MQM6_SACVD Length = 333 Score = 311 bits (799), Expect = 1e-83, Method: Composition-based stats. Identities = 77/278 (27%), Positives = 132/278 (47%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L+RIR GLA++++++A +L P + S ++A A S+++V +F + +G Sbjct: 38 SPLVRIRSLLPGLARAEQRVAKVVLEDPSSVARRSITEVAMAAKTSETTVTRFCKAIGVG 97 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L++AL+ A S + I DD L V K+ + A+ T + Sbjct: 98 GYPQLRIALAADTARTEAKSSRDLGGDITADDDLASVVSKVSFADARAVEETAEQLDIAE 157 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L +L A R+ + G+GAS VA + KL +IG + A D H +L + S D Sbjct: 158 LTRVTELLAEATRVDVYGVGASAFVAADLQQKLHRIGRVSFAWSDTHIMLTSAAVLSEGD 217 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + +AIS++G + A G +AIT F + + A H L T A E S + Sbjct: 218 VAVAISHSGATTDTVEALRVAKEHGATTVAITNFPRSPIASVADHVLTTAARETTFRSGA 277 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ AQ + D LFI + Q+ ++ + + + V Sbjct: 278 TASRIAQLTVIDCLFIGVAQRRMDESMAALEATREAVN 315 >UniRef50_Q8R7I8 Transcriptional regulator n=3 Tax=Firmicutes RepID=Q8R7I8_THETN Length = 285 Score = 310 bits (795), Expect = 4e-83, Method: Composition-based stats. Identities = 79/277 (28%), Positives = 148/277 (53%), Gaps = 4/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N +L+I+ Y L ++KK+ADY+L ++ +LS +LA + G ++++V+F +++G Sbjct: 8 NVILKIQSIYNSLTNAEKKVADYVLENAESVIYLSITELAEKCGTGETTIVRFCRRIGLS 67 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF KL L++ +A P IH I +DPL ++ +K+ ENT A+ T+ + S + Sbjct: 68 GFQEFKLNLAKEIAE----PETSIHENISFNDPLDVLVQKITTENTLAISNTVKLLSMSE 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + V + +AR+I G+GASG A + +K M++G N A D H + + + D Sbjct: 124 LEKAVDAIINARKIQFYGVGASGYTALDAKYKFMRLGLNVDANLDAHIQAISAVSLTDKD 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS++G ++ G +V+AIT + + + A L T A+E S + Sbjct: 184 VAVGISFSGSTKDTVETCRLAKEAGARVIAITNYARSPITSVADIVLLTSAKETPLRSGA 243 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +++ AQ + D+L+ A+ + + A + + + V Sbjct: 244 LTSKIAQLHILDILYTAVAVKLKDKAVQELNKTAKAV 280 >UniRef50_C6WFA6 Transcriptional regulator, RpiR family n=2 Tax=Actinomycetales RepID=C6WFA6_ACTMD Length = 304 Score = 308 bits (789), Expect = 2e-82, Method: Composition-based stats. Identities = 79/277 (28%), Positives = 131/277 (47%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L++IR GLA++++++A +L P T H S ++A AG S+++V +F + +G Sbjct: 9 SPLVKIRSLLPGLARAEQRVAKVVLDNPATVAHRSITEVAESAGTSETTVTRFCKAIGVG 68 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L++AL+ A + I D LR V K+ + A+ T + + Sbjct: 69 GYPELRIALAADTARTAARTDRDLGGDIGPGDDLRQVVGKVAFADARAVEETAEQLNVDT 128 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V + A R+ + G GAS VA + KL +IG A D H L + + D Sbjct: 129 LQAVVDAVARAGRVDVYGFGASAFVAFDLQQKLHRIGRTCFAWNDTHIALTSAAVLTGAD 188 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS+TG E A G +A+T F + + + A H L T A E S + Sbjct: 189 VAVGISHTGSTTETVEALRVARERGATTVALTNFPRSPISEVADHVLTTAARETTFRSGA 248 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +++ AQ + D LFI + Q +E A + + V Sbjct: 249 MASRIAQLTVVDCLFIGVAQHHVESATSALEATYDAV 285 >UniRef50_UPI0001788119 transcriptional regulator, RpiR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788119 Length = 278 Score = 304 bits (781), Expect = 2e-81, Method: Composition-based stats. Identities = 78/282 (27%), Positives = 143/282 (50%), Gaps = 5/282 (1%) Query: 1 MNG-LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 MNG L+R+R+ Y L S++K+A ++L +P +S LA +G SQ+++V+ + +G Sbjct: 1 MNGGLVRLREVYDSLNPSERKVAAFILQEPAEMIQMSVADLAVRSGSSQAAIVRLCKTMG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 +KG+ LKL ++ L P + IR +D + + + + N ++ T+ + E Sbjct: 61 FKGYQDLKLKVAGDLQE----PLATGYQDIRPNDSISAIIQNVSNNNIQSIRDTMKIMEE 116 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + E V L ++RI + G+GAS L+ + K ++I + D H L + +P Sbjct: 117 GMVEEAVLALDQSKRIFMFGVGASNLIGMDAQQKFLRINKVCISFPDPHVQLTSAVLLTP 176 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD + ISY+G E+ AA G K + IT + + L + LYT + E S Sbjct: 177 DDAAVCISYSGETDEVIRAAAIAKEKGCKTIGITKYGDSTLSRSVDIPLYTSSTENEIRS 236 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++S+ Q L D+L++ + ++ E + + + S +K+L Sbjct: 237 GAMSSRITQLNLIDILYLGVASRNYENSVKYLDESRRAIKRL 278 >UniRef50_A4F6M8 RpiR-family transcriptional regulator n=7 Tax=Actinomycetales RepID=A4F6M8_SACEN Length = 308 Score = 304 bits (779), Expect = 3e-81, Method: Composition-based stats. Identities = 79/277 (28%), Positives = 136/277 (49%), Gaps = 1/277 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L+RIR GLA++++++A+ +L P + S ++A AG S+++V +F + +G Sbjct: 14 SPLIRIRSLLPGLARAEQRVANIVLADPASVARRSITEVAEAAGTSETTVTRFCKAIGVG 73 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L++AL+ A + S + + I +D +R + EK+ + A+ T + E Sbjct: 74 GYPDLRIALAADTA-RTSSRDRDLGSDIGPEDDVRKIIEKVSYADAKAVEETADQLDAET 132 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V + ARRI + G+GAS VA + KL +IG A D H L + D Sbjct: 133 LRSLVDAVARARRIDVYGVGASAFVALDLQQKLHRIGLTCFAWSDTHNALTSAAVLREGD 192 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS+TG E A E + G A+T F + + + A H L T E S + Sbjct: 193 VAIGISHTGATTETVEALQEAGKRGATTAALTNFARSPITEVADHVLTTAVRETTYRSGA 252 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +++ Q + D LFI + Q+ L+ + + V Sbjct: 253 MASRIGQLTVIDCLFIGVAQRHLDQTKAALEATYEAV 289 >UniRef50_C0ZD50 Transcriptional regulator n=32 Tax=Bacillales RepID=C0ZD50_BREBN Length = 288 Score = 301 bits (771), Expect = 3e-80, Method: Composition-based stats. Identities = 69/277 (24%), Positives = 138/277 (49%), Gaps = 3/277 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L ++R Y L+ ++++ADY+L H S +LA++ + ++V + ++LG++G Sbjct: 11 VLTQLRAIYTQLSGKEQQIADYILEHASEIIHFSITELADQCQCADATVFRLCRRLGFRG 70 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + A K+AL+ + + ++ I+ DD + + EK+ N + T + ++++L Sbjct: 71 YQAFKIALASEVTNPKQTIHQEINLD---DDDVSAIAEKIFTANIETIRDTQQIINKDEL 127 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V+ L +A RI G G S ++AQ+ K M+ G D H + + + + Sbjct: 128 MKIVSCLENASRIEFYGSGGSAVIAQDAYHKFMRTGIPCLYHSDAHYQVMSASLLTKGAV 187 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ IS++G +++ A G K + IT + + L + A CLYT + E + ++ Sbjct: 188 VVGISHSGSNKDILAALQVAKEAGAKTIGITSYGKSPLVRLADMCLYTTSRETVFRTEAL 247 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S+ AQ L DLL++A+ + E I+H + Sbjct: 248 SSRLAQLSLIDLLYVAVSLRRQEDTIANIQHIREAIS 284 >UniRef50_Q8RD36 Uncharacterized HTH-type transcriptional regulator TTE0211 n=3 Tax=Clostridia RepID=Y211_THETN Length = 282 Score = 296 bits (760), Expect = 4e-79, Method: Composition-based stats. Identities = 72/278 (25%), Positives = 134/278 (48%), Gaps = 4/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L IR+ S+ K+A Y+L P LS +LAN S++S+++F + +G K Sbjct: 3 DVLAVIREMSSSFTPSEAKIAKYILENPTVVTELSVNELANACDTSEASIIRFCRTIGLK 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ ++ +LA Q + I +D + V +K+ N A+ +T+ V + E+ Sbjct: 63 GFQELKIKIAVSLAKQTRK----LDGGITSEDDVMAVIQKIANFNKQAIDSTIAVLNAEE 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + L +A +I G+ ASG+VA + K +I A +D H L + D Sbjct: 119 LTKAAEALANANKIDFYGVAASGVVAYDAMLKFSRINIPCTAYQDTHLQLTSAVNLKKGD 178 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + ISY+G +E+ A G +++T + + L + A L+ +EE + + Sbjct: 179 VAFGISYSGATKEIVEAIQTAKEAGATTISLTKYGQSPLAKAADINLFVSSEEAMFRAGA 238 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +++ AQ + D+LFI + Q+ + ++ ++ Sbjct: 239 MASRIAQLTVIDILFILVAQKKYNDVVRYLENTSEVLS 276 >UniRef50_A1HSQ6 Transcriptional regulator, RpiR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSQ6_9FIRM Length = 287 Score = 296 bits (760), Expect = 5e-79, Method: Composition-based stats. Identities = 70/277 (25%), Positives = 134/277 (48%), Gaps = 4/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L RIR Y+ L ++++K+ADY+L HLS +LA +G +++++ + QK+GY+ Sbjct: 10 GCLPRIRSIYKALTKAEQKVADYILENAAKVVHLSITELAEVSGSAEATIFRLCQKVGYR 69 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ K+AL+ L +P+ ++ + D + ++ K+ + + TL + E Sbjct: 70 GYQHFKIALAGDLY----TPAELVYKDVNAGDSMGVIARKVFHDINEGLQDTLKIIDEAA 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + V + ARRI G S ++A + ++ M+ G A D H + + P D Sbjct: 126 LDKAVAAITKARRIDAYGSAGSAVIAADIEYRFMRFGIPVRAYADPHMQIISAALMQPGD 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L +A+S+TG R+L + + G V+AIT + + L + A L A+E S + Sbjct: 186 LAIAVSHTGANRDLLDSVAMAKQNGATVIAITSYMKSPLSKLADITLCGSAKETEYRSEA 245 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++A + D L++ ++ + E + + Sbjct: 246 MAARLVHLAIVDALYVGVMLDRQDCIVENMEKIRKAI 282 >UniRef50_B8E0M8 Transcriptional regulator, RpiR family n=2 Tax=Dictyoglomus RepID=B8E0M8_DICTD Length = 281 Score = 293 bits (752), Expect = 4e-78, Method: Composition-based stats. Identities = 75/277 (27%), Positives = 139/277 (50%), Gaps = 4/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +I+++ + S++K+A+Y+L + HL +LA GVS++++V+ +KLG + Sbjct: 4 SILEKIKEQKESFRDSEEKVANYILARWQEVLHLPITELAERIGVSEATIVRMCKKLGLR 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+AL+ P +H ++ D L + +K+ N AM +TLNV S ++ Sbjct: 64 GFQELKIALATE----KIQPIKTVHQAVQEGDDLETILKKVFSANIRAMESTLNVISVKE 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + + +AR++ + G+G SG VA + K MK G A D H + + P D Sbjct: 120 IERAIDAILNARQLQIYGVGGSGPVALDAQHKFMKTGIPTVAYIDSHMMAMSASILEPQD 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++ IS +G +++ A + G + IT + L + L +EE + S Sbjct: 180 VVIGISASGSSKDIFEALELAKNRGATTIGITHYAKTPLDRVLDIKLSVSSEETFYRTES 239 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 SA AQ + D L+I + + L+ E ++ + + Sbjct: 240 TSARIAQLSIIDTLYIGVALKRLDKMIENLKLTREAI 276 >UniRef50_UPI000196C77F hypothetical protein CATMIT_02718 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196C77F Length = 277 Score = 293 bits (751), Expect = 5e-78, Method: Composition-based stats. Identities = 73/281 (25%), Positives = 147/281 (52%), Gaps = 6/281 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + RI++ L +++K++A Y++ P+ S+ +L + S ++VV+FA+KLGY Sbjct: 1 MSCITRIKEA--SLTETEKEIAQYIIEHPEQVLDDSAMKLGEKTHSSSAAVVRFAKKLGY 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GFP LK+ L++ L +H D+ + + K+ + T ++ S Sbjct: 59 SGFPQLKIELAKDLVGSIPEVDNLLH----PDEDMATLMNKVHHSQIVTIDKTYHLLSAS 114 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V L A+ + L G+G S +V +F KLM+IG A D+H + +V + + Sbjct: 115 TLEDVVKALEQAKHVYLFGVGGSAIVCDDFIHKLMRIGKYACFYPDVHLQMTSVPNMTEE 174 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL + +SY+G + + AA + +AIT N L + H L ++EQ+ Sbjct: 175 DLAIFVSYSGETKGIVTAAKWAKEMNIPSVAITQSAYNKLGKLVDHVLTIPSQEQSLRIG 234 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++S+ ++ ++ DLL+ L++++ E ++I ++ +++++ Sbjct: 235 AMSSRYSSLIVVDLLYYGLVKRNKEKYAQKIINTRRIIQEM 275 >UniRef50_C6Q8T9 Transcriptional regulator, RpiR family n=1 Tax=Thermoanaerobacter mathranii subsp. mathranii str. A3 RepID=C6Q8T9_9THEO Length = 282 Score = 292 bits (748), Expect = 1e-77, Method: Composition-based stats. Identities = 71/278 (25%), Positives = 131/278 (47%), Gaps = 4/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L I++ S+ K+A Y+L D LS +LA S++S+V+F + +G K Sbjct: 3 DILTVIKELEATFKPSEAKIAKYILDNADVVTELSINELARACDTSEASIVRFCRTIGLK 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ ++ +L+ Q + + I DD + V +K+ N A+ T+++ + Sbjct: 63 GFQELKIKIAVSLSKQTKK----LDGGITDDDDVSDVIQKIANFNKQAIDNTISLLDVKS 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V L +A +I G+ ASG VA + K +I A +D H L + D Sbjct: 119 IIKAVDALSNANKIDFYGVAASGTVAYDAMLKFARINIPCTAYQDTHLQLTSAANLKKGD 178 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + ISY+G RE+ A + G +++T F L + A L+ +EE S + Sbjct: 179 VAFGISYSGCTREIVEALEVAKEAGATTISLTKFGQFPLVKVADINLFVSSEEPLFRSGA 238 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ AQ + D+LFI + ++ + + ++ + Sbjct: 239 TASRIAQLTVIDILFILVAKRKYNDVVKFLENTTEALS 276 >UniRef50_C4L752 Transcriptional regulator, RpiR family n=4 Tax=Bacillales RepID=C4L752_EXISA Length = 282 Score = 290 bits (744), Expect = 3e-77, Method: Composition-based stats. Identities = 81/279 (29%), Positives = 146/279 (52%), Gaps = 4/279 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MNG RIR Y L++ ++++ADY+L QP+ H + Q+A++ V++S+V +F Q++G+ Sbjct: 4 MNGTARIRGAYSTLSKKEQRIADYILKQPEQIIHHTINQVADDLDVAESTVFRFCQRVGF 63 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG+ ALK+AL+ + +P IH I D + EK+ N + +T + Sbjct: 64 KGYQALKIALASDVV----APLQDIHEDITETDTALEIAEKIFSTNGKTIESTRQILEGV 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V + ARRI G G S +VA + K ++ G +A+ + H L + + Sbjct: 120 SLEKAVELFLGARRIEFFGSGGSAVVALDAYHKFVRSGLQVSAMLESHMQLMSASQLTTA 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ + IS++G +E A + G ++AIT + + L + A LYT+++E A S Sbjct: 180 DVAVVISHSGASKETLDIAKLLKEKGVPMIAITNYAKSPLSKIADVSLYTVSQETAFRSE 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++++ A+ L D LF A++ + E A ++ + Sbjct: 240 ALASRIAELSLIDALFTAVMMRRGEAARTSLQQMREAIS 278 >UniRef50_D2AR91 Putative transcriptional regulator, RpiR family n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AR91_STRRD Length = 299 Score = 290 bits (743), Expect = 4e-77, Method: Composition-based stats. Identities = 71/281 (25%), Positives = 139/281 (49%), Gaps = 2/281 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + +R L + + +A +L P + + + +G S++++V+ A+ LG+ Sbjct: 11 NLVATVRAVLPSLTPAAQAIARLILDDPGMVARSTITEFSAVSGTSEATIVRTARALGFA 70 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ L+ AL+ A+A E P + + DDPL V K+ + + A+ T + ++ Sbjct: 71 GYSQLRFALAAAVAR--EEPERLVPGDLGPDDPLTDVIAKVTRAESEALADTAAQLNPDR 128 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V + +ARR+ + G+GASGLVA + A KLM+IG ++ A D H L + D Sbjct: 129 LGAVVEAMTAARRVDVYGVGASGLVAADMAQKLMRIGRSSHAFTDAHLALTSAALLGEGD 188 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + +S TG ++ + G +AIT ++L + A H L + E A + Sbjct: 189 VTVGVSCTGETPDVIAPMRVARKAGATTVAITNNPRSSLAELAEHVLVSAGRETAFRPGA 248 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 +++ +Q ++ D +F+ + Q+ E + +R + + + + Sbjct: 249 LASRISQLLIVDCIFVGIAQRTFETSDAALRATRGALDEFM 289 >UniRef50_A8S9N1 Putative uncharacterized protein n=3 Tax=Bacteria RepID=A8S9N1_9FIRM Length = 321 Score = 289 bits (742), Expect = 5e-77, Method: Composition-based stats. Identities = 75/273 (27%), Positives = 145/273 (53%), Gaps = 1/273 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LLR+R+ L+ +++++A ++L PD L+ + LA + S SSVV+ + +G++ Sbjct: 36 NVLLRLREVQPSLSSTERQIAQFILENPDETTTLTIRDLARRSFSSPSSVVRICRVIGFQ 95 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ L+ AL+ LA+ E+ S I D L+ + +K+ +N ++ T + ++ Sbjct: 96 GYKELRHALTLELATLGENGSHR-EKDITPQDSLQEIVDKVTHKNIQSLLDTQRLLLLDE 154 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L +CV ++ +AR ++L GIG+S VA++ K +++ D H+ L + ++ D Sbjct: 155 LEQCVELIANARTVLLFGIGSSLCVAKDTYLKFLRLDKPCVVNEDSHSQLLQARNATAQD 214 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + SY+G E+ EM G V+A+T + P+ + Q A H LY A E + + Sbjct: 215 VGIVFSYSGQTMEMIQCIKEMKAGGAPVIAVTRYYPSEVAQLADHVLYVAANESLFRNGA 274 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 +S+ +Q + D+L+ A ++ E R+ + Sbjct: 275 MSSRLSQLNVVDILYTAYASRNHEDTMRRLTKT 307 >UniRef50_Q97MK5 Uncharacterized HTH-type transcriptional regulator CA_C0191 n=5 Tax=Clostridia RepID=Y191_CLOAB Length = 283 Score = 289 bits (742), Expect = 6e-77, Method: Composition-based stats. Identities = 70/276 (25%), Positives = 135/276 (48%), Gaps = 2/276 (0%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L+RI++ L S++K+A+Y+L LS ++LA ++G S+S+VV+ + L YKG+ Sbjct: 5 LIRIKEIINDLNPSERKIAEYILNNSKAISDLSIKELAGKSGSSKSAVVRLCKILNYKGY 64 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 ++A+++ + + + + I D L + + + N ++ T+ V SEE + Sbjct: 65 KEFRIAIAKDTVNVDKEENR--YTDINPKDDLHTIIKNISYNNKKSIDNTMEVLSEELVE 122 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 + + A R+ GIGAS +VA + K M+I N A D H + D+ Sbjct: 123 KASEAISKAYRVDFYGIGASYIVAMDAFQKFMRINKNVRATPDTHLQVEFASNLKKGDVA 182 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 +AISYTG ++ + G +++T F N++ L+ ++ E S ++S Sbjct: 183 VAISYTGETKDTFESIKAAKEAGATTISVTKFGSNSISDLCDINLFVLSPEITFRSGAMS 242 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + AQ + D+LF ++ + E E + ++ + Sbjct: 243 SRIAQLNVIDILFTSVAGRMFEEVKEFLENTRKSTR 278 >UniRef50_C6J1X3 RpiR family transcriptional regulator n=2 Tax=Bacillales RepID=C6J1X3_9BACL Length = 289 Score = 289 bits (741), Expect = 8e-77, Method: Composition-based stats. Identities = 76/277 (27%), Positives = 135/277 (48%), Gaps = 3/277 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L + + L+ ++KL +Y+L P T H +LAN G+S S+V +F + +KG Sbjct: 4 ILHAVSSHLETLSPQERKLGEYILESPATVIHQGITELANACGISPSTVTRFCKTFHFKG 63 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 FP K+ L+ LA + P+ + I + L+ + E + + A++ T + +L Sbjct: 64 FPDFKMKLASELAHK---PAENHYQDIIAGNDLQKIVEAMEANHLASITDTTRLLDMNQL 120 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V L A+RI L G+ S +VAQ+F KL++IG N A D H + + + D+ Sbjct: 121 SRAVEALCRAKRIDLYGVATSSIVAQDFYQKLVRIGKNCTAFADSHMQITSASSLGEGDV 180 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 LAISY+G E A G L++T ++ N+L A L++ + E+ + Sbjct: 181 ALAISYSGETPETIDALRCAKDSGATTLSLTQYSSNSLASLADIALFSSSLEEGMRRGDM 240 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ AQ + D+LF ++ + + ++ S V+ Sbjct: 241 ASRIAQLHVIDILFTGMVSLEFQDFIPKLESSYQNVQ 277 >UniRef50_A8FJ30 Possible RpiR family transcriptional regulator n=51 Tax=Bacillus RepID=A8FJ30_BACP2 Length = 285 Score = 287 bits (735), Expect = 3e-76, Method: Composition-based stats. Identities = 65/277 (23%), Positives = 136/277 (49%), Gaps = 3/277 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 + +IR +GL K +A+++ +P HLS +LA + S++++ + ++LG++GF Sbjct: 9 IEKIRAASRGLPPKLKAIAEHITSEPRDIIHLSIVELAKKTASSEATIFRLCKRLGFEGF 68 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 LK+A+++ + ++ + ++ DD + + +K+ + N +A+ + + + E + Sbjct: 69 QDLKIAIAQEI---DQTKPNYVDEEMSLDDDMAVFMQKVFQTNISALKDSFQLLNPEDVE 125 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 + + ++ A+R+ G G SGL+A + K M+ G N D H + + Sbjct: 126 KAIQIIHEAKRLEFYGSGGSGLIATDAFHKFMRTGINCIVHTDSHFQAMSAGLLDQHSTV 185 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + IS++G ++L A G K + IT + + L Q A LYT +E A + ++S Sbjct: 186 IGISHSGRNKDLLDAMKTAKSKGAKTIGITSYQRSPLSQLADVTLYTATQETAFRTEAMS 245 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A AQ + D+L+ AL + ++ + + Sbjct: 246 ARLAQLTVIDVLYFALAHLRQQETITNLKQMRETISQ 282 >UniRef50_C0ZJF9 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZJF9_BREBN Length = 297 Score = 286 bits (734), Expect = 4e-76, Method: Composition-based stats. Identities = 70/277 (25%), Positives = 132/277 (47%), Gaps = 4/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LL I+ +S++K+A +L Q D+ + S LA +AGV +++V++F +K+G+ Sbjct: 20 NTLLHIQSLLPSFTKSEQKVAHIVLQQTDSVIYSSVIDLAEKAGVGETTVLRFCRKIGFH 79 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ KLAL++ L + P +H ++ DD L ++ K+ N A+ T + E+ Sbjct: 80 GYQEFKLALAQELVN----PVKNLHGEVGEDDSLDIITHKVTATNQQAIGDTSALFQLEQ 135 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L CV +L+ A I G+G S + AQ+ + ++IG A + H P D Sbjct: 136 LERCVDLLQKANTIHFYGVGTSAVTAQDAKYTFLRIGLRVDAFNESHLQAMAAATLGPGD 195 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + +S +G ++ + + G + +T + + + A L T A+E S Sbjct: 196 VAIGLSVSGSTKDTIDSLKVAKQAGAACICLTHYRRSPITNVADITLLTAAQEGPLQGGS 255 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++A AQ + D++ + ++ E A + V Sbjct: 256 LAAKIAQLHVLDVISTTITMRNKEKALLYKERTAKAV 292 >UniRef50_C6D7K6 Transcriptional regulator, RpiR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D7K6_PAESJ Length = 284 Score = 286 bits (733), Expect = 6e-76, Method: Composition-based stats. Identities = 69/277 (24%), Positives = 125/277 (45%), Gaps = 2/277 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + I Y ++KK ADY+L D ++S LA GV ++S+ +F + LG+K Sbjct: 5 SITSTIHSHYNRFTATEKKTADYILEHADAVVYMSITDLAEGCGVGEASIFRFCKALGFK 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ K+AL+ ++++ E P + +I+ D L K ++ N A+ T + + Sbjct: 65 GYQQFKIALAHSISADNEIPQLSGQVKIQ--DTLEDAVSKTLQSNINALNETFKLIQLDS 122 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 ++ + +L + R I G+G+S + A K M+I D H + D Sbjct: 123 INRAIDLLIRSDRFIFYGVGSSLMTAMEANNKFMRITNKTGCSVDSHQQAMSAALMGERD 182 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + ISY+G ++ A + G ++ IT F + L + L A E S Sbjct: 183 VAIIISYSGSTKDSIEVAKKAKERGAAIIVITRFVKSPLTSYSDITLLCGANEGPLQGGS 242 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +SA AQ L D+L++ ++ E + ++ A V Sbjct: 243 LSAKIAQLYLLDVLYVEYFKRTYEASIVNKENTSAAV 279 >UniRef50_C6J4B4 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J4B4_9BACL Length = 288 Score = 286 bits (732), Expect = 7e-76, Method: Composition-based stats. Identities = 66/277 (23%), Positives = 130/277 (46%), Gaps = 1/277 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L++IR + L ++ +A+Y+L + HLS + LA + S +SV++F + +GY Sbjct: 7 NILIKIRDMKENLTPVERMVAEYILANTEDIPHLSIKSLAKLSKTSDASVLRFCKTMGYS 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + +++S AL S + + I+ D L + + + N ++ TL+V + Sbjct: 67 GYRSFIVSISAALGSMDDERK-DQYTDIQPGDDLDTIIANISRNNMKSIEDTLSVLDRGE 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V LR++ RI+ GIGASGLV Q+ K +I + D H+ L D Sbjct: 126 VARAVKALRASNRIVFFGIGASGLVCQDGEQKFSRINKMCHSYTDGHSQLTAATLLGKGD 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + +S +G E+ + + +AIT + + L +A L E S + Sbjct: 186 VAIFVSNSGNTLEIIETLEIAKKNNATTVAITKYNKSELADKADILLGISTPEITMRSGA 245 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + + A + D+LF + + + + + + +++ Sbjct: 246 MGSRIAMLTIIDMLFAGVASAEYQNVKKYLTKTHSIL 282 >UniRef50_A7GD47 Transcriptional regulator, RpiR family n=10 Tax=Clostridium RepID=A7GD47_CLOBL Length = 281 Score = 284 bits (727), Expect = 3e-75, Method: Composition-based stats. Identities = 84/281 (29%), Positives = 147/281 (52%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M LLRIR+ + + +S+KK+A+Y+ P S+Q++A + S +S+++F +K+GY Sbjct: 1 MGVLLRIRENFDSMTKSEKKIAEYIFKSPKDIISDSAQEIAIKTSTSPASIIRFTKKVGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 K AL +A + S I +D + + KL + + T + +E Sbjct: 61 NSLNEFKFAL---VAEEYTKESTEFDYIINYNDSIDSIINKLGNKVIDTINDTKELVDDE 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 KL E V +++A I L G+GAS +VA +F +KL++I +D H LA + Sbjct: 118 KLLEAVKAIKNAETIYLYGVGASAMVAMDFQYKLLRINKKVMFQQDSHLQLAVSVHITNR 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ +AISY+G RE+NLA +E + G +AIT + L A L + E+ Sbjct: 178 DVAVAISYSGNTREVNLAVEEAKKNGATTIAITKCGKSILSNIADINLNIPSIEKDLRIG 237 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +IS+ +Q +TD LF+ + +++L+ + + ++ LV+ L Sbjct: 238 AISSRTSQLFVTDSLFLGIAKENLDKTEKNLINTRNLVEVL 278 >UniRef50_A9KIQ0 Transcriptional regulator, RpiR family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KIQ0_CLOPH Length = 284 Score = 283 bits (724), Expect = 7e-75, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 122/278 (43%), Gaps = 1/278 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 RI Y +S+K +AD++ P+ + S LA GV ++V +F + L Sbjct: 4 GIFARIESSYSKFTKSEKIVADFVFENPEKVLYTSITDLAEICGVGDTTVFRFCKALKLN 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ K+ L++ +A + I+ + DD ++ + +K + + AA+ T + E Sbjct: 64 GYQEFKMFLAQDIAVR-TGSDYTINGSVSQDDDIQTICKKALAVDIAALTETFEGLNFEA 122 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V M+ +A ++ G+G+SG++A K M+I N + D H + S D Sbjct: 123 VTKVVDMISNANKVQFFGMGSSGVIALEAKMKFMRILPNVEHIADCHMQFMSAALLSSRD 182 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L + SY+G ++ A+ G KV++IT + + L + + + E + + Sbjct: 183 LAIIFSYSGSTKDSIEIANLAKSNGCKVVSITRYVNSHLANISDVVIPCGSNEGPLDGGA 242 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S Q + D+L++ + + + + Sbjct: 243 SSTSMVQFYILDILYLLYFTKHYHQSKLNKAKTTESIS 280 >UniRef50_C5CIM2 Transcriptional regulator, RpiR family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CIM2_KOSOT Length = 283 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 83/281 (29%), Positives = 135/281 (48%), Gaps = 4/281 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LL I +++KK+A +++ P ++S ++++ VS+ S+V+F QKLGY Sbjct: 6 NVLLTIETLKDSFTKTEKKIATFVVKNPQKVVYMSLTEVSDILKVSEGSIVRFCQKLGYT 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF K+AL+ S+ + D L + + + + + T SEE Sbjct: 66 GFHPFKIALA---VSENQESFSSSEFDFNSRD-LSSLKNYVAQRHIDVIKNTSEFISEEI 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L CV + +AR I+++G+GASG A + +K M+IG N D H D Sbjct: 122 LEACVEKILTARTILISGVGASGNTAHDAFYKFMRIGLNCKTSHDAHIQAMIASELREGD 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +LLAIS +G E+ AD + G V+AITG+ + L + A H L T E S + Sbjct: 182 VLLAISQSGSTLEIVDIADIARKGGATVIAITGYARSPLARFAHHVLLTPTRESPFESGA 241 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 + + AQ + +LLF A+ + E + I + V K + Sbjct: 242 LRSKIAQLYVLELLFTAVFHRMEEKGRKFIERTADSVAKWI 282 >UniRef50_C2D8M2 Possible transcriptional regulator n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D8M2_9ACTN Length = 291 Score = 281 bits (721), Expect = 1e-74, Method: Composition-based stats. Identities = 72/274 (26%), Positives = 138/274 (50%), Gaps = 1/274 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N ++R+R+ L ++K +A Y+L P + LS + LA + VS ++VV+ + +G++ Sbjct: 3 NIIIRLRENIGFLNPAEKAVARYVLQCPHESNRLSVKALAARSFVSPAAVVRMCKSIGFE 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF K L+ LA++ + I+ +D L + +K+ +N ++Y L + E Sbjct: 63 GFKEFKTELTRELATEKLILPLD-TKDIKQNDTLESIIKKITLKNIHSLYDALRLIDPET 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V +L++ RI+L G+GAS + A++ K +++ D H L T + S+ D Sbjct: 122 IEKAVELLQACDRILLFGLGASLIAAKDANLKFLRVNKTCLINDDWHLQLITARNSTSQD 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + ISY+G E A+ + ++AIT + + + A LYT + E SA+ Sbjct: 182 VGIVISYSGQTAETLTCAEILKHNNTPIIAITRCIESPISKLADVLLYTTSNESLFRSAA 241 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 +S+ +Q + D+L+ A D E + + Sbjct: 242 MSSRISQLNIIDILYTAFAVSDYEKNFTYLSKTR 275 >UniRef50_A8LV24 Transcriptional regulator, RpiR family n=7 Tax=Actinomycetales RepID=A8LV24_SALAI Length = 320 Score = 281 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 74/279 (26%), Positives = 137/279 (49%), Gaps = 1/279 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L R+R L + +++A+++L P+ A + +LA +G S +++ +F + +G++ Sbjct: 32 GVLARVRAGADDLTGALRRVAEHVLSDPEAAARATIVELAERSGTSPATITRFCRAMGFE 91 Query: 62 GFPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ L+L ++ + +V I +I+ DPLR V +++I +T AM+ T + Sbjct: 92 GYADLRLGIAAETGRARLAGWTVDIGREIQPGDPLRRVLDQIIAADTRAMHDTAALLDLA 151 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ + A R+ + G S LV + + L +IG A A D+H LA+ Sbjct: 152 EVERAAVAIAGASRVNIFGASGSALVGEEMQFMLHRIGVAAWAWSDVHEGLASAALLRVG 211 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ L +S++G RE E G +A+TGF + L + A L T + Sbjct: 212 DVALGVSHSGQTRETIEMLAEAGSRGATTVAVTGFPRSPLAELADIALLTASRATTFRPD 271 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++SA H Q ++ DLL+IA+ Q+ + A +R + V Sbjct: 272 ALSARHPQLVVLDLLYIAVAQRTHDRAHAALRRTAQAVD 310 >UniRef50_UPI0001693BD8 YbbH n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001693BD8 Length = 265 Score = 281 bits (719), Expect = 2e-74, Method: Composition-based stats. Identities = 70/260 (26%), Positives = 127/260 (48%), Gaps = 3/260 (1%) Query: 21 LADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPES 80 LA Y++ + +LA + S +++ +F + L ++GF KL LS LA Q Sbjct: 2 LASYIVEHAHEVVSMGITELAERSQTSPATISRFCKSLHFQGFTDFKLKLSGELAKQ--- 58 Query: 81 PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGI 140 PS + I +PL + + + ++ T +N ++L + V+ L++AR+I L G+ Sbjct: 59 PSEHSYQDIVAGNPLSEIVSAIEANHLRSIADTTQLNDIKQLQQAVSALKNARQIDLYGV 118 Query: 141 GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAAD 200 SG+VAQ+F KL++IG + D H + + +D++ AISY+G E A Sbjct: 119 ATSGIVAQDFYQKLVRIGKRTSVFSDPHMQITSASNLGENDVVFAISYSGDTEETIQALR 178 Query: 201 EMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALI 260 G +++T F N L + L+ E+ +++ AQ + D+LF +L+ Sbjct: 179 CAKERGAVTISLTKFGTNPLANLSDIRLFASTLEEGMRRGDMASRIAQLHVIDILFTSLV 238 Query: 261 QQDLELAPERIRHSEALVKK 280 ++ + R+ S LV+K Sbjct: 239 SEEFDELIPRLERSYQLVRK 258 >UniRef50_B5I8T9 Sugar isomerase n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I8T9_9ACTO Length = 312 Score = 281 bits (719), Expect = 2e-74, Method: Composition-based stats. Identities = 69/281 (24%), Positives = 122/281 (43%), Gaps = 2/281 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + IR LA S +K+ + +L P H S+ +L G SQ++V +F + +G + Sbjct: 23 DVTTLIRTELPRLAGSLRKVGELILEDPAAVTHCSAAELGRRTGTSQATVTRFCRAIGLE 82 Query: 62 GFPALKLALSEALASQPES--PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 + L + L++ S S I I DD L V + + + A+ T+ Sbjct: 83 SYQHLLIELAQERGRGEVSDWGSAEIGPDISPDDSLERVVQVVGSADLRAIQQTIERIDL 142 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L L ARRI + G+G SG VAQ +L +IG ++H + +P Sbjct: 143 DALERAAQALAKARRIDVYGVGGSGAVAQETETRLFRIGCQVRGWTEVHGAATSAALLTP 202 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+ + IS++G RE + G +AIT + L + A L + E + + Sbjct: 203 ADVAIGISHSGATRETLEPFEMAKERGATTIAITTDPRSPLAKAADIRLISATSETSFRT 262 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 SI H+ M+ D L++ + Q + A + ++ + + Sbjct: 263 GSIGGRHSVLMIVDCLYVRVGQVAYQRASASLALTDHITPQ 303 >UniRef50_C6XNZ1 Transcriptional regulator, RpiR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XNZ1_HIRBI Length = 297 Score = 281 bits (719), Expect = 2e-74, Method: Composition-based stats. Identities = 82/278 (29%), Positives = 139/278 (50%), Gaps = 4/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + RIR R L S +ADY+L + +S +LA G S+ SV+ ++LG Sbjct: 20 NVISRIRIRKDSLGPSTSTIADYVLGHANAVVGMSVTELAEATGTSEGSVINLCRQLGLS 79 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LKL+L++ + P IH ++ D V +K+ + A+ TL++ + Sbjct: 80 GFQQLKLSLAQEVVR----PVQFIHEDLQPSDDTSTVCQKMFHAGSEALRETLSILDPDA 135 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V ++RSA R+ + GIG+S +A++ +++++IG +A V D H + + P+ Sbjct: 136 ISMAVDVIRSADRVEIYGIGSSAPIAEDAQYRMLRIGLDAKVVVDSHIQAISASRTGPNV 195 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L IS++G E A G K + IT F + LQ A LYT+A E S + Sbjct: 196 AVLTISHSGSTHETLAATRLARDAGAKTIIITNFASSPLQAYADVKLYTMARETKFRSEA 255 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +++ AQ + D+L AL D E A +R + ++ Sbjct: 256 MTSRIAQLCILDVLIAALALDDYERATTVLRQTSEVLS 293 >UniRef50_C0Z7S3 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z7S3_BREBN Length = 288 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 75/274 (27%), Positives = 146/274 (53%), Gaps = 3/274 (1%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 ++ L S++K+ADY+L P+ LS Q+LA +GVS++++++ A+ L KG+ L Sbjct: 12 LQAILDQLKPSERKVADYILAHPEDVVKLSVQKLAEYSGVSEATIIRLARSLNMKGYQEL 71 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 KL ++ L Q S + +I + + + + + N ++ TL+V S E++ + V Sbjct: 72 KLRVAGDLTKQTARGS---YQEIMMEGSVESIMQAVSWNNIQSIQDTLSVLSNEEVKKAV 128 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 +L AR+I + G+GAS ++A + K +I A D HA L + + D+++ I Sbjct: 129 DVLSVARKIDVYGVGASAVIADDIRQKFSRINLWCEAYSDFHAQLTSAVTLTEKDVVIGI 188 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 SY+G ++ + E + G ++ +T F P+ + + A+ L+T + E++ S ++++ Sbjct: 189 SYSGQTEDIIQSLTEAKQQGATIITLTKFGPSPVAELANIRLFTSSVEKSIRSGAMASRI 248 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 AQ + D+LFI +I + E + S V + Sbjct: 249 AQLNVIDILFITMISRMQERVIPLLEKSRLAVSR 282 >UniRef50_P44540 Uncharacterized HTH-type transcriptional regulator HI0143 n=33 Tax=Gammaproteobacteria RepID=Y143_HAEIN Length = 288 Score = 280 bits (718), Expect = 3e-74, Method: Composition-based stats. Identities = 76/277 (27%), Positives = 138/277 (49%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L +I YQ L +S+KK+AD +L PD S ++A V ++++V+F + +G+K Sbjct: 6 NVLNKIGSLYQSLTKSEKKIADTILRSPDLVSQCSLSEIAKHLQVGEATLVRFCRTIGFK 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF KL LS LA++ + +I D + +KL M T+N+ ++ Sbjct: 66 GFSEFKLELSIELATKDNQDESILETEIMPSDDSLTIAQKLQTAVANVMEETINLLDLKQ 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L E V +L+ ARRI L G+G+SG+ A++ KLM+IGF A + H + + D Sbjct: 126 LEEVVKVLKKARRIFLFGVGSSGVTAEDAKNKLMRIGFQVDASGNNHFMYMQAALLTSSD 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + +S++G E + G +A+T + + + A + L ++ S Sbjct: 186 VAIGLSHSGYSAETAHTIKIAKQNGATTVALTHSLRSPVTEYADYVLVNGNKQGKLQGDS 245 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 I AQ + DL++ L+Q + ++A + + + ++ Sbjct: 246 IGTKIAQLFVLDLIYALLVQGEEDIAAQTKQKTLNVI 282 >UniRef50_C0CSK7 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CSK7_9FIRM Length = 282 Score = 280 bits (718), Expect = 3e-74, Method: Composition-based stats. Identities = 61/279 (21%), Positives = 120/279 (43%), Gaps = 4/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + IR R L +++K+A+Y+L D + + +LA A VS +SVV+F + LGYK Sbjct: 5 SCKEIIRGRMNYLTNTERKIANYVLENYDQVLNSNITELAENAKVSDASVVRFCRSLGYK 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ K+ ++ + + + ++ + D ++ K+ + + TL + + Sbjct: 65 GYQDFKINAAKDVLPREK----HLNPILEESDSPDMICHKIFNLEISVLERTLASLNMRE 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + + +R++ G G S LV Q+ K MKIG D L + D Sbjct: 121 VEKAAQFIFHGKRVLFFGSGGSLLVGQDALHKFMKIGVQVYVHEDRDLQLMASSLAGEGD 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++ IS++G + G + +A+ L + A + T +EE S S Sbjct: 181 VVIGISHSGSNYSVLRCLKNAKENGAQTIALVSRGKTPLSKIADVVIDTASEETIFQSES 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +S AQ + D L + + + + I+ + + Sbjct: 241 VSTRIAQLAIIDSLVSIVAFMNYDESYRAIQKTRKATSE 279 >UniRef50_C5C2G7 Transcriptional regulator, RpiR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C2G7_BEUC1 Length = 285 Score = 279 bits (714), Expect = 9e-74, Method: Composition-based stats. Identities = 70/283 (24%), Positives = 132/283 (46%), Gaps = 2/283 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ I+ R A S +++A+ +L +P + +LA++ S++++V+F + LG Sbjct: 1 MSIQSSIQSRLDQFAPSMRRVAEAILERPQVVLEKTISELASQCETSETTIVRFCRTLGL 60 Query: 61 KGFPALKLALSEALASQ--PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 G+ L+L L+ + + I +D L + K+ +T + TL Sbjct: 61 TGYVQLRLELATEIGRENAQRGELGDHGADILAEDGLAAMAAKIAFTDTLGIEETLASLD 120 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 E L V + +A R + G+G+SG A + KL +IG A D H + SS Sbjct: 121 IEHLERVVDAIDTAGRSVTYGVGSSGSSAADLQRKLFRIGRVAFTFDDPHDAVTAAALSS 180 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P D+ +A S++G RE + G + +A+T +AL + A L T E Sbjct: 181 PGDVAVAFSHSGATREALAFLATAGKHGARTVAVTNSAESALARAADIVLVTSVRETQFR 240 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S ++++ AQ M+ D +F+ + Q+ + + ++ + A ++L Sbjct: 241 SGAMASRIAQLMIVDCIFVGVAQRRYDQTVDALKSTYAAAQEL 283 >UniRef50_B2TJ91 Transcriptional regulator, RpiR family n=1 Tax=Clostridium botulinum B str. Eklund 17B RepID=B2TJ91_CLOBB Length = 285 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 66/277 (23%), Positives = 133/277 (48%), Gaps = 4/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L RI Y L ++KK+A Y+L P H S +LA + S+++V + KLGYK Sbjct: 8 GCLERITNIYSELKGAEKKVAQYVLENPKNIIHFSITELAEVSKASEATVFRLCSKLGYK 67 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ LK+ L+ ++ P I+ +++ +D ++ K++ N ++ +TL +N E Sbjct: 68 GYQDLKINLAGSVIE----PIDNIYEEVKENDDTYIIMRKIMSSNINSIESTLKINKTED 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + + ++ +A++I+ G+G S +A + K ++ G + A D H + ++ D Sbjct: 124 LDKAIAIILNAKKIMFFGMGGSWTIANDAYHKFIRTGIDCVASCDSHWQVMFSSMANSGD 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++A S +G +EL + + G K++AITG + L + + L E S + Sbjct: 184 AIIAFSNSGSNKELVENINLAKKRGIKIIAITGNEKSPLAKISDLHLIAYGNESMFRSEA 243 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + + M+ D L++ + + + + + Sbjct: 244 MESRLTSLMIVDWLYVGVAIKRKDKTLGNLERIRNGI 280 >UniRef50_C4G9W4 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G9W4_9FIRM Length = 280 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 66/277 (23%), Positives = 124/277 (44%), Gaps = 6/277 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LL ++ Y L +++KK+ADY+ +S +LA E V+ +SV +F + +G K Sbjct: 5 NVLLSMQLSYNQLTRTEKKIADYVQKNAQKVLFMSITELAEECHVADASVHRFCRTIGAK 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ K+ LS + + + + ++++K + A+ T + +EK Sbjct: 65 GYQEFKMWLSINMGHEKGEEESEEEDGKEP------IFQQVLKSHLEAINETNQLLDKEK 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V ML AR+I+ G+G S A K + + D H + +D Sbjct: 119 VDQAVRMLTEARQIMFFGVGDSKTAAIEANNKFLHVTPKVMCAGDTHLQAMAASMMTEED 178 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 LL +SY+G ++ A G KV++IT F + L + + L ++E S Sbjct: 179 LLFVVSYSGSTKDTVEVAQIAKEAGAKVISITRFLKSPLTEFSDCVLICGSKEGPLEGGS 238 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + A +Q + D+L+ + + + A E + + V Sbjct: 239 MGAKLSQLHIIDILYQCYFKANGKKARENRQKTANAV 275 >UniRef50_B6ITC5 HTH-type transcriptional regulator hexR, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6ITC5_RHOCS Length = 280 Score = 278 bits (713), Expect = 1e-73, Method: Composition-based stats. Identities = 84/277 (30%), Positives = 137/277 (49%), Gaps = 5/277 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RIR GL +S++K+AD +L QP + S +LA++A VSQ +VV+F + +G G Sbjct: 1 MLDRIRSMRPGLRRSEQKIADIVLRQPHAVVNASVAELAHDADVSQPTVVRFCRSIGCSG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + KL L++ LA+ P P + +R DDP+ + KL+ + A+ N + + L Sbjct: 61 YQDFKLRLAQDLAAGPARP----EDAVRPDDPVAEIAAKLLNRSIGALTRLRNQLNPDAL 116 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V +L RR+ G GASG+VA + K ++G A D H P + Sbjct: 117 EAAVQVLTETRRLDCYGFGASGVVALDAQNKFFRLGLPVVAHTDSHVQAMAAALLGPQGV 176 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 LA+S +G REL + D L G +V+AIT + L RA+ L A E ++ + Sbjct: 177 ALAVSRSGRTRELLRSVDLALAGGARVIAITA-GGSPLAGRATVPLLVDAPEDSSPYTPM 235 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ A + D+L +A + + +R A ++ Sbjct: 236 TSRIAHLAVVDILQVATALRRGVHTGDPLRRPAAALR 272 >UniRef50_A8RRF4 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A8RRF4_9CLOT Length = 289 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 70/279 (25%), Positives = 140/279 (50%), Gaps = 1/279 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L+RI++ + ++K + +L P+ A S +QLA++ S +++V+ +K+G+ Sbjct: 3 SVLVRIQEYSAQASGAEKGVLRFLRENPEEAAGYSIKQLADKTFSSAATIVRLCRKMGFD 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ L+ +L A + + P+ +I+ DD L + K+ +N ++ T + + Sbjct: 63 GYKELQKSLLYESALR-RESTRPMEQEIKKDDSLEELVNKVTYKNIVSLDNTRKLVDLDI 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L++CV +L ++ + L GIG+S LVA++ KL+++ D HA L + D Sbjct: 122 LNQCVELLDRSQTVYLFGIGSSLLVARDMYLKLLRVNKACVICDDWHAQLLQARNIRSCD 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L L +SY+G+ E+ A E V+ I+ F + L + A + L A E S + Sbjct: 182 LALIVSYSGLTEEMITCAREARLREAPVITISRFEQSPLVRLADYNLAVAATELIFRSGA 241 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +S+ +Q + D+L+ A + + + E+ R + + Sbjct: 242 MSSRISQLNMIDILYTAYVHKRYDECMEQFRKTHIAKSE 280 >UniRef50_Q4LA29 Similar to transcriptional regulator n=1 Tax=Staphylococcus haemolyticus JCSC1435 RepID=Q4LA29_STAHJ Length = 283 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 70/276 (25%), Positives = 136/276 (49%), Gaps = 2/276 (0%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L+ I L S++++A+Y+L PD + S Q+LA+ VS ++VV+ ++KL KGF Sbjct: 5 LIIIESSLSDLNPSERRVAEYILEHPDEIINYSVQKLADLTNVSVATVVRLSKKLKCKGF 64 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 LKL ++ L + +I D + V + + NT + T + S E + Sbjct: 65 QDLKLKIAYDLNE--PGNIQRGYAEIDKDYSIEEVTQTVFHNNTKTLRDTERILSTENIK 122 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 ++ ++R+ + GIGAS L+AQ+F KL +I + + S +D++ Sbjct: 123 HAFELIVNSRKTCIYGIGASALIAQDFKQKLTRIDYWCDVGSSFDEQVTLSANLSSEDVV 182 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 +AIS +G +++ + G KV++IT + N + + L+ + E+A S ++S Sbjct: 183 IAISSSGQTKDIVNSTQLAKEKGAKVISITKYGDNPISNLSDVQLFVSSSEKAKRSGAMS 242 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + A + D+L+I + D +++ ++ +K Sbjct: 243 SRIAMLSIIDILYICIASNDYLSNRQKLENTRKAIK 278 >UniRef50_C4V1J5 RpiR family transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1J5_9FIRM Length = 282 Score = 277 bits (709), Expect = 3e-73, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 119/278 (42%), Gaps = 4/278 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L I + L +S+KK+A+Y+L P+ + +LA G S +S+V+F + G KG Sbjct: 6 FLQLIEDKLGTLTKSEKKIAEYILEHPNRVVDATITELAERIGTSDASIVRFCKLFGCKG 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + K+ L+ + + ++ + D + +K+ A ++ TL + + E L Sbjct: 66 YQNFKIRLAREVVPHYKQ----LNVALEQHDTALTICQKIFNTEIATLHETLEMLNVEHL 121 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 +R A I + G G S +VAQ+ K +K+G + D + D+ Sbjct: 122 QTMAQRIREADYIEVFGSGGSSVVAQDIRHKFLKVGIRCTVLLDADIQAMSASLLKKGDV 181 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + IS+TG + + + G V+ +T + + + A + ++E S S Sbjct: 182 AIGISHTGSTKSVFHCLKMARKNGAYVILLTTQAKSPIGRIADLVIPVGSKETLFKSEST 241 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 SA A+ ++ D + + D + +I + + Sbjct: 242 SARIAELVVMDAVLALAVSDDYKKYNVKITKTRDATSE 279 >UniRef50_B4EZY5 RpiR-family transcriptional regulator n=54 Tax=Gammaproteobacteria RepID=B4EZY5_PROMH Length = 295 Score = 277 bits (709), Expect = 4e-73, Method: Composition-based stats. Identities = 72/279 (25%), Positives = 126/279 (45%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L + L + +++ADY+L P LS QL+ +++VV+F + LGYK Sbjct: 13 KILDTLGAMKNSLTRVSQRIADYILFHPTEVTQLSIAQLSQATKAGEATVVRFCRTLGYK 72 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF K+ L+ +A+ S + ++ D + +G KL + TLN+ ++ Sbjct: 73 GFQDFKMDLAIEMATSDNDESPILDAEVSHQDDIHTIGLKLQATINNVLSETLNLLDMQQ 132 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V L SA + + G+G+SG+ A++ KLM+IG+ AV + H + D Sbjct: 133 VQGAVNALLSANYVFICGVGSSGITAEDLKNKLMRIGYRVDAVTNNHFMYMQASLLKSGD 192 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS++G E A G +A+T + + + A H L + S Sbjct: 193 VAIGISHSGNSLETVHALKLAKEAGASTIALTHNLGSQIMEYADHHLINGNRQGKLQGDS 252 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 I AQ + DLL+ L+Q E E+ + +K+ Sbjct: 253 IGTKTAQLFVLDLLYTLLVQAKPETVKEQKLRTLNALKQ 291 >UniRef50_Q1LPJ6 Transcriptional regulator, RpiR family n=6 Tax=Burkholderiaceae RepID=Q1LPJ6_RALME Length = 338 Score = 276 bits (708), Expect = 4e-73, Method: Composition-based stats. Identities = 68/278 (24%), Positives = 126/278 (45%), Gaps = 5/278 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RI Y L S+++LADY+ + L+ +LA+ AGVSQ ++ +F LGY G Sbjct: 1 MRDRILAVYDSLRPSERRLADYVARHGASVIRLTMPELADRAGVSQPTIARFCAALGYDG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F KL ++ + + +H + DD + K+ A + + N S +++ Sbjct: 61 FKEFKLQFAQNVG----GGTPFVHQDVEADDRPADIAGKVFDRTIATLMSVRNALSADQI 116 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + +L ARRI G G SG+VA + K ++G A D H + P D+ Sbjct: 117 EHGIRLLAGARRIEFYGCGNSGIVALDIQHKFFRLGIPTTAYSDPHVFSMSAALLRPGDV 176 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + +S +G ++ AA G VLA+T + L + A C+++ EE + + Sbjct: 177 AVLVSNSGRTWDMLTAATLARSSGASVLALTHSG-SPLARLADVCVFSDVEEDSEVYTPM 235 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ +L D+L + + ++ ++A +++ Sbjct: 236 TSRICHLVLGDVLAAGVALDRADSVAAGLQRAKAHLRE 273 >UniRef50_A8RI47 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RI47_9CLOT Length = 285 Score = 276 bits (706), Expect = 8e-73, Method: Composition-based stats. Identities = 72/275 (26%), Positives = 148/275 (53%), Gaps = 5/275 (1%) Query: 6 RIRQRYQGLAQ-SDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 R++ + + ++ K+ +++ + H+S A GVS++++V++AQKLGYKG+ Sbjct: 11 RVQSILPSINKKNEMKIYEFIEINRKEIIHMSVADAAEACGVSEAAIVRYAQKLGYKGYQ 70 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 A+K+++++ + P I+ Q+ D + + +K+ N ++ T +V S E + E Sbjct: 71 AMKISIAQDVIE----PGQQIYGQLSKGDTIPTIVDKIFDSNIQSLRDTSDVLSRENIDE 126 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 V ++ RR++ G+G SG VA + K +KIG+ A A D + + D+L+ Sbjct: 127 AVNLILGCRRLLFFGVGGSGCVAMDGQHKFLKIGYMAMAFTDSNLQAMAASVLTSRDVLV 186 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 A+S++G +++ +A D + G K +AIT + + + ++A LYT + E A NS ++S+ Sbjct: 187 AVSHSGASKDILMAMDIAKQSGAKTIAITNYGKSPIVEKADVVLYTSSNETAFNSDALSS 246 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 A+ + D+L+I + + + + I + + Sbjct: 247 RIAELTIIDMLYIGVSYKRYDESYANILKTRKALD 281 >UniRef50_A6LRF3 Transcriptional regulator, RpiR family n=2 Tax=Bacteria RepID=A6LRF3_CLOB8 Length = 294 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 68/283 (24%), Positives = 135/283 (47%), Gaps = 4/283 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + +I+ Y L S+KK+ADY+LL + ++ +L+ + GVS+ ++++F + +G Sbjct: 6 SYEYKIKNMYNLLRSSEKKVADYVLLNGHSVSTMTLAELSRQVGVSEPTIIRFVKSIGCS 65 Query: 62 GFPALKLALSEALASQPESPSVP----IHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 G+ K+AL + + + I D+ + V K+I A+ TL + Sbjct: 66 GYSEFKMALMKEWGRESVDKQYDSKLLVELHIDRDEKIEDVPVKMIGLTIKALEDTLKII 125 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 K + + M+RS+ I + G+G SG VA + K ++IG A D + Sbjct: 126 DINKYKKAIEMIRSSNIIDVYGVGNSGSVASDIRNKFLRIGLECRAYSDSNIQQICASHL 185 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 + +DL + +S++G + A G + +A+T F A+ + A +T EE Sbjct: 186 TSNDLAIGVSHSGSTIDTVNALKIAKESGARTIALTNFKAPAISEYADITFFTGGEETTF 245 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 S ++ + +Q + D+L++ ++ D +L +R+ L+K+ Sbjct: 246 YSETMVSRISQLAIVDMLYMGILLDDYDLYTKRLEKINLLLKE 288 >UniRef50_C1PDB4 Transcriptional regulator, RpiR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PDB4_BACCO Length = 283 Score = 275 bits (704), Expect = 1e-72, Method: Composition-based stats. Identities = 70/277 (25%), Positives = 139/277 (50%), Gaps = 4/277 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RI+ Y + ++K+ADY+L P H + Q+A++ V+ ++V +F +++G+ G Sbjct: 10 CLHRIQTMYSEFSAKERKIADYILENPQRLVHSTINQVADQLLVADATVFRFCKRIGFSG 69 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F ALK+AL+ A P + ++ D + V K+ + N + T++ +++ L Sbjct: 70 FQALKIALAAEAAR----PGKNMDEAVKDTDNEKAVAIKVFESNIETLQDTIHTLNQKHL 125 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 HE V + A+ I+ G G++ ++A + K ++ A D H L + + +D+ Sbjct: 126 HEAVEWICRAKHIVFYGCGSASVIALDALEKFLQTDLAVTAYTDPHLQLLSAARCTKEDV 185 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + IS+ G +E+ + + G K +AIT F + L Q+A L+T+++E +S Sbjct: 186 AVFISHAGADKEMLKLLQAVQKTGAKTIAITQFAKSPLSQKADVPLFTVSQEADFRFSSF 245 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 SA Q L D L++ ++ + + E ++ + Sbjct: 246 SARIVQLSLIDTLYVNVMLRYKDTNEEILQKGKETYT 282 >UniRef50_UPI0001789683 transcriptional regulator, RpiR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789683 Length = 289 Score = 274 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 76/280 (27%), Positives = 141/280 (50%), Gaps = 3/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LL I Y L +++KK+ADY+ P+ + L+ +AGV ++SV++F +KLG++ Sbjct: 12 NTLLMISSIYSSLTKTEKKVADYVKGFPEETVLATVTDLSEKAGVGETSVIRFCRKLGFR 71 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF KL++++ L + P + I D L V KL ++ + TL++ + + Sbjct: 72 GFHEFKLSVAQDLVDR---PPSVVDTSIDEQDDLMTVARKLTMQHEILLKNTLDLVNADN 128 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V L +A ++ + G+G+SG+ A + ++LM++G N A RD H + + D Sbjct: 129 LRMAVDKLLAANKVYVYGVGSSGITALDLHYQLMRLGLNVEAHRDSHIIAMSASLVKKGD 188 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L+ AIS +G R+L A E + G V+ +TG + + A L + E T + Sbjct: 189 LVFAISTSGSTRDLVDAVKEAKKNGADVICLTGHLRSPIATYADTVLLVSSREMPTEGGA 248 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++ Q + ++L L + + + + + ++ KL Sbjct: 249 LATKFMQTYMLNILTTLLTMKKEDASESLKKTASSVADKL 288 >UniRef50_C2L140 RpiR family transcriptional regulator n=6 Tax=Clostridiales RepID=C2L140_9FIRM Length = 285 Score = 274 bits (701), Expect = 3e-72, Method: Composition-based stats. Identities = 68/279 (24%), Positives = 122/279 (43%), Gaps = 1/279 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +IR Y +++KK+ADY+L PD +S LA V +SV +F + + K Sbjct: 4 DFLTKIRSAYNQFTKAEKKVADYILQNPDQVLFMSISDLAETCKVGDTSVFRFCKTMNVK 63 Query: 62 GFPALKLALSEALA-SQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ K+ LS ++ + ES N D+ + + K+++E ++ T ++ Sbjct: 64 GYQEFKMTLSLSMRGNGKESKEGDGGNVSLQDNNIAELAGKVLEETIDSIKETHSLLDFN 123 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 K+ E + L A+RI+ G+GAS L A K +I + L + Sbjct: 124 KVTEAMNALSKAKRILFFGVGASMLTAMKAMNKFHRIEPKVYCSEMVSQQLMSAATMERG 183 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ + SY+G R++ A G V++IT F + L L A + Sbjct: 184 DVAVIFSYSGATRDIVEIAKLAKESGATVVSITRFQKSELTDYTDILLLCGANVGSLQKG 243 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S SA +Q L D+++ ++ E + + + +K Sbjct: 244 STSAEISQLFLVDIMYTEYYRRHYEYCNQILEKTTVAIK 282 >UniRef50_Q1QSE2 Transcriptional regulator, RpiR family n=28 Tax=cellular organisms RepID=Q1QSE2_CHRSD Length = 289 Score = 273 bits (700), Expect = 3e-72, Method: Composition-based stats. Identities = 66/280 (23%), Positives = 124/280 (44%), Gaps = 7/280 (2%) Query: 1 MN--GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 M+ +R+R + +S++K+A ++L P+ H+ LA EA VS+ +VV+F + L Sbjct: 1 MSSALFDEMRRRMEHFRRSEQKVARFVLRHPEDVIHMRIVDLATEAKVSEPTVVRFCRAL 60 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 G GF KL L++ LA+ + +++ D + + + + + Sbjct: 61 GCNGFQDFKLKLAQMLATGSQFAQFSMND----SDSVAEFAHNIFDSTVGTLLSVRDRLD 116 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 L + VT L A R+ G GASG VA + K ++ + AA D H + + Sbjct: 117 HAALGKAVTALAMANRVEFYGFGASGAVAFDAQHKFFRLQISTAAYTDPHMQNMSAVTLT 176 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P D+++AIS TG R L + G V+ + + + L + LY E Sbjct: 177 PRDVVVAISQTGRTRALVASVRLARETGATVIGL-CPSDSPLASEVTLPLYIDVHEDTEI 235 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +S+ A ++ D+L + + + E+++ + + Sbjct: 236 YTPMSSRVAHLVIIDVLAVGVAKTRGPKLAEQLKSVKKSL 275 >UniRef50_B1YJ20 Transcriptional regulator, RpiR family n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YJ20_EXIS2 Length = 284 Score = 273 bits (700), Expect = 4e-72, Method: Composition-based stats. Identities = 81/281 (28%), Positives = 139/281 (49%), Gaps = 5/281 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 +I ++ L S +K+AD++L + ++ LA E+G S ++VV+F + LG K Sbjct: 4 GIFSQISAVHEELPSSSRKVADFVLAHMNEIAGMTIHHLAEESGTSAAAVVRFCRALGLK 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L++ +S A + ++ I ++ + EK + + A+ T SE++ Sbjct: 64 GYPELRMRISADTART----DLKGYHDIEKNERPADLVEKTVSNSIQALQDTAKQLSEDR 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + E +L AR I GIGAS +VA + A K ++G D H + + +S DD Sbjct: 120 IAEAADVLDQARAIYFYGIGASNVVALDAAQKWTRVGKLTIQESDQHLVATILANASQDD 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSA 240 + AISY+G E+ G KV+++T F N + Q A L+T A E SA Sbjct: 180 VFFAISYSGETEEVVELIRLAKIRGLKVISLTRFGDNRVSQLADIALWTSRAPEAPLRSA 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++S+ AQ D+LF++ + ER++++ VK L Sbjct: 240 ALSSRLAQLFAIDVLFLSYAAVHYDDTIERLQYTRESVKML 280 >UniRef50_A4TMJ1 RpiR-family transcriptional regulatory protein n=22 Tax=Gammaproteobacteria RepID=A4TMJ1_YERPP Length = 292 Score = 273 bits (700), Expect = 4e-72, Method: Composition-based stats. Identities = 72/279 (25%), Positives = 129/279 (46%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L + L +S +++A Y+L QP LS L+ ++++++F + LGYK Sbjct: 12 KILDALGAMQNSLTRSAQRIAAYILAQPAQVTQLSIADLSALTQAGEATIIRFCRTLGYK 71 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF K+ L+ +A++ S + + ++ D +G KL + TLN+ S E Sbjct: 72 GFQDFKMDLAIEVATRHNSENSLLDADVQEGDDTLAIGSKLQSAINNVLSETLNLLSIES 131 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V +LR A RI + G+G+SG+ A++ KLM+IG A + H + +P D Sbjct: 132 VEQVVKVLRPADRICIFGVGSSGITAEDAKGKLMRIGLRVDAATNNHFMYMQASLMNPGD 191 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS++G E A G +A+T + + + A + L + S Sbjct: 192 VAIGISHSGTSAETVQALKLAKEAGATTVALTHNMGSRITELADYVLINGNRQGQLQGDS 251 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 I AQ + DL++ L++ D A R + V + Sbjct: 252 IGTKIAQLFVLDLIYALLVKADPAQAESIKRKTTQAVSQ 290 >UniRef50_C4FUK3 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FUK3_9FIRM Length = 280 Score = 273 bits (698), Expect = 6e-72, Method: Composition-based stats. Identities = 72/282 (25%), Positives = 135/282 (47%), Gaps = 4/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + +I+ + + +++ + Y+L +++ +L +G S ++ +FA+K+GY Sbjct: 1 MSCITKIKSALESMTATEQMIGRYILEHRHEVLEMNTLELGWASGTSGAAWTRFAKKMGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG PALKL L++ + + + + D L + K + T + E Sbjct: 61 KGLPALKLDLAQD---RTDEEMPEVDLFLDPRDTLGALLHKTQTILEQNLRRTYELIDEA 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + + M+ SA R+ L GIG SG+V + KL +I RD H L+A + P Sbjct: 118 VLAQAIDMMASAHRLFLCGIGGSGIVCMDLVHKLTRINRPVTYDRDTHVLMAQMAHCMPG 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITG-FTPNALQQRASHCLYTIAEEQATNS 239 D++L +SY+G +N A G K++AITG L A CL+ +E+ Sbjct: 178 DVVLVVSYSGNTHTVNQMAYLAKEQGAKIIAITGHNLKAPLASLADVCLFIPRDEKEIRL 237 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+++ ++TDLL+ + Q+ E + + +++K+ Sbjct: 238 GSVTSRDGSLIVTDLLYYGVAQRQFHATKEHLVKTRKMIRKI 279 >UniRef50_B0N1V0 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0N1V0_9FIRM Length = 277 Score = 273 bits (698), Expect = 6e-72, Method: Composition-based stats. Identities = 74/281 (26%), Positives = 140/281 (49%), Gaps = 4/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN +I++ ++K +A Y+L S+Q L + G S +++++F++KLGY Sbjct: 1 MNSYAKIKEAQSSYTSTEKVIAKYILENAADVLKCSAQSLGEKTGTSAAAIIRFSKKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK++L+++ +P I I +D + + +K + N + T + Sbjct: 61 NGFSELKMSLAQS----KRAPEEKIDFIIDENDDIVTLADKCCRLNMNTVLKTYQLIDTN 116 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L + L +A I L G+G S +VAQ+ KL +IG +D+H L ++ + + Sbjct: 117 QLDNAIKKLIAANTIYLFGVGGSAIVAQDVEQKLTRIGKKVIYNKDLHVQLTFSESMNKE 176 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D L ISY+G + L A + +++IT F PN L + + L EE+ Sbjct: 177 DAALFISYSGTTKGLVEIAKMIKNKNVPIISITQFKPNPLSKLSDIILQVPNEEKEIRMG 236 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +IS+ + ++TDLL+ + + DL +++ ++ +V K+ Sbjct: 237 AISSRISSLVMTDLLYYGVFKNDLTGNKDKLIETKRIVSKI 277 >UniRef50_C0D6A5 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D6A5_9CLOT Length = 282 Score = 272 bits (697), Expect = 8e-72, Method: Composition-based stats. Identities = 66/276 (23%), Positives = 134/276 (48%), Gaps = 2/276 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L+++R Y+ L+ ++ ++ +Y+L P + +LA E+ S ++VV+ +K+ Sbjct: 6 MSVLIKLRD-YRNLSAAENQVREYILKYPKKVLEYTVYELAKESFTSPATVVRLCKKIDI 64 Query: 61 KGFPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 KGF LK+ L+E Q ++ I +D + EK+ + T + +E Sbjct: 65 KGFARLKVLLAEETKYFQDMKLNLLDTTTIEKNDSPHAIIEKITNIAVKTIEETRVLVNE 124 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++ + +L+ A + G+GAS VA + +K M+IG N + S Sbjct: 125 KQFMQVARLLQKAVIVDFYGVGASSPVAIDAQYKFMRIGKNVITYQLYDRQYVQAVNSDA 184 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 + + ISY+G +E+ A + + G V+A+T N+L + A + L+ A+E S Sbjct: 185 SHVGIIISYSGETKEMLKIAGILQKNGTPVVAVTSSGENSLNRIADYNLFVTAKETVFRS 244 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 ++++ AQ + D+L+ D + + ++I+ + Sbjct: 245 GAMASRTAQLYIIDILYALYCSLDYDESIKKIQQTR 280 >UniRef50_Q45581 Uncharacterized HTH-type transcriptional regulator ybbH n=7 Tax=Bacillaceae RepID=YBBH_BACSU Length = 283 Score = 272 bits (697), Expect = 8e-72, Method: Composition-based stats. Identities = 75/279 (26%), Positives = 137/279 (49%), Gaps = 5/279 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L I+ L S++KLADY+L P A + +++ A S ++V++ + LG KGF Sbjct: 6 LAIIQSMKHKLPPSERKLADYILAHPHKAIESTVNEISALANSSDAAVIRLCKSLGLKGF 65 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 LK+ ++ LA P+ + I +PL + EK A+ T ++ ++L Sbjct: 66 QDLKMRVAGDLAK----PTFQGYRDIVPHEPLPSISEKTAGNAIQAIQDTSDLMDYKELE 121 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 V++L A + G+GASG+VA++ K ++I A A D H + + + + DD++ Sbjct: 122 RAVSLLLKAHTVHFIGLGASGIVAKDAQQKWLRIHKQATAFTDTHLVASLIANADKDDIV 181 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSASI 242 AIS++G +E+ G +++T F+ ++ A LYT + E SA+ Sbjct: 182 FAISFSGETQEIVELFAMAKEKGITTISLTQFSQTSVSALADVPLYTAHSNEALIRSAAT 241 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+ AQ + D+LF+ + + E I + A ++ + Sbjct: 242 SSRLAQLFIIDVLFLGMAAEQYETTTGYIDKTRAAIQSM 280 >UniRef50_C6L9A2 Transcriptional regulator, RpiR family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L9A2_9FIRM Length = 336 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 65/261 (24%), Positives = 120/261 (45%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L I ++Y L +S KKLADY+ ++LS LA +GVS++++ +F +KLG Sbjct: 55 NILDLITEQYPTLTRSGKKLADYIFANTTETQYLSISALAENSGVSEATITRFCRKLGLS 114 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ KLA++++ + I D L + +KL+ N ++ T ++ E++ Sbjct: 115 GYNDFKLAIAKSDHVTDMGEPSGSPSTITSQDSLPDIFQKLLSANILSLTETFDLLDEKE 174 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V +L A + G G+S ++A + + D H + ++ ++P D Sbjct: 175 ISRAVDLLYGAHHVYCLGNGSSSVMAMEAWARFSTASTRFIHIADSHMQMLSIALATPQD 234 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++L SY+G R++ + + V+ +T F + A L E S S Sbjct: 235 VILFFSYSGATRDMEDIMNIAHKRKIPVILVTHFPKSQAAAFADVTLLCGYNESPLQSGS 294 Query: 242 ISACHAQGMLTDLLFIALIQQ 262 I+A Q ++ D LF + Sbjct: 295 IAARMGQMLIIDCLFHGFCLK 315 >UniRef50_C8W838 Transcriptional regulator, RpiR family n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8W838_ATOPD Length = 304 Score = 271 bits (695), Expect = 1e-71, Method: Composition-based stats. Identities = 74/273 (27%), Positives = 134/273 (49%), Gaps = 2/273 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 LR+ + + + +++ + DY+L P+ S +LA + S S+VV+ +KLG Sbjct: 3 GVRLRLEEYRKNASSAERDIIDYILSDPEAVVGQSIHKLAAQTYTSASTVVRLCKKLGCG 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + AL LA +S + + I D ++ EK+ +N +++ T+ + + Sbjct: 63 GYKEFQQALIYELAVSNKSNDIAVGGVI-AGDTTDVIIEKVTAKNISSLELTMQLLDAQV 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V+++ A I L G+GAS LVA++ KLM++ N D H+ L + S +D Sbjct: 122 VDSVVSLMMQAHSICLFGMGASLLVARDLQLKLMRLNINCNLSDDYHSQLLYAKNMSRED 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT-PNALQQRASHCLYTIAEEQATNSA 240 L + +SY+G+ RE A G KV++IT + L R+ + L E S Sbjct: 182 LAIVVSYSGLTREAIECAWIAKANGAKVISITRGGIDSELIHRSDYVLGVAETEHIMRSG 241 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRH 273 ++S+ AQ + D LF A + ++ E + +R Sbjct: 242 AMSSRIAQLNVVDALFAAYVNRNYEKSVKRFST 274 >UniRef50_A9KMQ5 Transcriptional regulator, RpiR family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KMQ5_CLOPH Length = 285 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 1/277 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N ++ R L S++K+A Y L + + +LA E+GVSQ + ++F + +G+ Sbjct: 3 NIEIKTRSIMDSLNNSERKVATYFLNNIENIFSIPIARLAEESGVSQVTWIRFCKAIGFD 62 Query: 62 GFPALKLALSEALASQPESP-SVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G LK +L L S + I+ L + + A+ T+ + + Sbjct: 63 GLKDLKKSLFMELNSSTSEGIDTSDFSDIKKHSTLEQMCNTIRNTTLQAVEDTIKLIDYD 122 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V++L A I L G+GAS LVA +F KL++I N DMH L + P+ Sbjct: 123 TLKKVVSILSKASCIKLFGVGASALVADDFCKKLLRINKNVNFSYDMHTQLVYGANARPE 182 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ + SY+G +E+ D + + IT +T + L A + +Y A E S Sbjct: 183 DVAVIFSYSGTTKEMLEIMDLAKKSNCPTIVITKYTKSPLVASADYSIYISAPEINYRSG 242 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 ++S+ AQ + DLLF +L ++ + + S + Sbjct: 243 AMSSRIAQLTIVDLLFTSLANKNYTSVEKYLEKSSEV 279 >UniRef50_A0KFB6 Transcriptional regulator, RpiR family n=3 Tax=Gammaproteobacteria RepID=A0KFB6_AERHH Length = 286 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 101/284 (35%), Positives = 155/284 (54%), Gaps = 4/284 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L +I L+ S+ K+ADY+L P+ H SSQ+LA +A VSQSS+VKF QK+G+ Sbjct: 1 MLTLSKISNIRSQLSPSELKIADYILACPEQVTHFSSQELAQQADVSQSSIVKFTQKIGF 60 Query: 61 KGFPALKLALSEALASQ---PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 KGF A KLA+SE L + ++N I DD L + +KL +E ++ T Sbjct: 61 KGFTAFKLAVSEDLGRKHAIKTDNVGDLYNGIGRDDDLETMAKKLAQEKINSIVETTQAL 120 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 L + ++ A R+ L GIG S L A++ +KL+KIG +D H ++ Q Sbjct: 121 DNATLARVLDVINQAGRVQLVGIGGSALTAKDLWYKLLKIGVTTLFAQDSHVQISIAQTL 180 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 P D+ L +SY+G R++ AA+ R G ++A+T F L+Q A L T+A+E Sbjct: 181 GPGDVQLVVSYSGASRDVLAAAELAKRNGATLIAVTSFRNTPLRQMADMVLDTVADENEL 240 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +SIS+ AQ +TD+LF+ L+Q+ + A I + + +L Sbjct: 241 RISSISSRTAQNTITDILFLGLVQRR-DEAWALIDGTRGAIDRL 283 >UniRef50_C3WE65 Transcriptional regulator n=5 Tax=Fusobacterium RepID=C3WE65_FUSMR Length = 284 Score = 270 bits (692), Expect = 3e-71, Method: Composition-based stats. Identities = 89/265 (33%), Positives = 151/265 (56%), Gaps = 1/265 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L++I ++ ++KK+ +Y+L PD + L++ +LAN SQ++VV+FA++LG+ Sbjct: 1 MGVLIKINSMLDNISSTEKKVGEYILENPDKIKDLNTYELANITKTSQATVVRFAKRLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPI-HNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 KGFPA KLALS+ L ++ V I H +I+ DD ++G K+ EN A+ T V Sbjct: 61 KGFPAFKLALSQDLGNRKAESHVNIMHEEIKPDDSFEIIGRKISNENITAISDTYEVTDF 120 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 +L + V ML AR+I+L GIG SG+VA++F +KL+++G +A D H L+ + Sbjct: 121 TELEKAVVMLSKARKIMLAGIGFSGIVAKDFYYKLLELGKHAMIEVDTHMQLSCLSTMGE 180 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD+L IS++G E+ G V+A+T PN ++ A L T+ S Sbjct: 181 DDVLFVISHSGKTMEMYNVVKVAKSKGITVIAMTSIAPNPIKDLADIRLNTVEMNSNFRS 240 Query: 240 ASISACHAQGMLTDLLFIALIQQDL 264 ++S +Q + D+L++ ++ ++ Sbjct: 241 TALSPRISQLTVIDMLYVKMMLENK 265 >UniRef50_A6LVH8 Transcriptional regulator, RpiR family n=8 Tax=Firmicutes RepID=A6LVH8_CLOB8 Length = 282 Score = 270 bits (691), Expect = 4e-71, Method: Composition-based stats. Identities = 70/277 (25%), Positives = 135/277 (48%), Gaps = 3/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L+I+ Y GL+ ++ +ADY+L P + H S L++E V+ S++ +FA+KLGY Sbjct: 4 SVRLKIKSLYNGLSAKEQNIADYILENPISVAHNSISYLSDELNVADSTLFQFAKKLGYS 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF K+A+ L + + IH +I DD + +K+ N + T + + Sbjct: 64 GFKEFKMAI---LIEENNFSTTSIHEKIEIDDNELTMAQKVFDSNIKTLTNTKKILGLDD 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + ++ ++ + G+G SG++A++ K ++ + D H L +P D Sbjct: 121 LKKAAEIISNSNLLYFFGVGGSGILAEDAYHKFLRSPAHVRHSTDYHIQLMEASLLTPQD 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + IS+TG +E A+ + G KV+ IT + L + +I+EE +S + Sbjct: 181 CAICISHTGKSKETIRIAEIVKEAGAKVIVITSHASSPLAKIGDVVFISISEEIEFHSEA 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +S+ +Q + D L++ L+ + E + E + + Sbjct: 241 LSSRISQLSILDSLYVILMFMNKEKSKEALSKVRRTI 277 >UniRef50_C9AZQ1 Phosphosugar isomerase transcriptional regulator n=2 Tax=Enterococcus casseliflavus RepID=C9AZQ1_ENTCA Length = 283 Score = 270 bits (691), Expect = 4e-71, Method: Composition-based stats. Identities = 75/280 (26%), Positives = 133/280 (47%), Gaps = 3/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L+I+ Y+ L+ ++ +ADY+L P H S L+NE G++ S+ +F +KLGY Sbjct: 4 SIRLQIKTLYKDLSLKEQAIADYILENPSKVSHSSISDLSNELGIADSTFFQFTKKLGYN 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF K+A+ L + + ++ IH I+ D + +K+ N + T N+ EE Sbjct: 64 GFKDFKMAM---LMQENDFSAISIHENIQKSDNELTMAQKVFDSNMTTLTDTKNLLKEED 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L M+ ++R+ G+G S +VA + K ++ D H L +PDD Sbjct: 121 LKLAAAMINQSKRLFFFGVGGSEIVATDAYHKFLRSPITVFHSSDYHIQLMEASLLTPDD 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + IS+TG RE A G K++ IT + L + +I+EE S + Sbjct: 181 CGIFISHTGKSRETIELAQVAKNNGAKIIVITSHAASPLAKLGDVVFISISEETEFRSEA 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +++ AQ + D L++ L+ + + A + I + K+ Sbjct: 241 LASRIAQLSIMDSLYVILMFINRDKAQQSIAKIRRSISKI 280 >UniRef50_A6LUR0 Transcriptional regulator, RpiR family n=2 Tax=Clostridium RepID=A6LUR0_CLOB8 Length = 281 Score = 270 bits (691), Expect = 4e-71, Method: Composition-based stats. Identities = 73/282 (25%), Positives = 139/282 (49%), Gaps = 2/282 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L I+Q Y +K +ADYL+ + +S++ +A S +VV+FA+K+G+ Sbjct: 1 MNVLQYIKQNYDSFTDREKLIADYLIETKERIISMSARDIAEATKTSAPTVVRFAKKIGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 LKL LS ++ + E+ ++ + D + + + + + M T+++ EE Sbjct: 61 NTLNELKLKLSINISKEEEAGAIQFQY-LDNDLGTKNIIYGIKQSVDSIMEQTVSLLDEE 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + + +L SA+ I + +G SGLV Q+F +KL ++ D H + + Sbjct: 120 CLDKAIELLISAKNIYIFSVGVSGLVGQDFYYKLSRMNKRCICNTDTHLQITSSVLLEEG 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAIT-GFTPNALQQRASHCLYTIAEEQATNS 239 D+ LAISY+G +E+ V+AIT N + + + A E++ Sbjct: 180 DVALAISYSGETKEVIKCVKNARNRKVPVIAITKASVNNTIADISDIVIRIPAVEKSIRE 239 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +IS+ +Q + D+L+I +I+ +++ E++ + VK+L Sbjct: 240 GAISSRISQLAIIDMLYIGMIRNNIKEVEEKLISTRKAVKEL 281 >UniRef50_D1ALE3 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1ALE3_SEBTE Length = 282 Score = 269 bits (690), Expect = 5e-71, Method: Composition-based stats. Identities = 65/278 (23%), Positives = 136/278 (48%), Gaps = 2/278 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N +I + S+ K+ +Y+ P++ ++ ++L+N ++++++F +K G+K Sbjct: 7 NLFNKINSLKKSFTASETKVFNYIEKNPESVVRMNIRELSNAIDTGETTIIRFCKKTGFK 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ K++L +L+ + +S I I D+ + E + + + TL++ + E Sbjct: 67 GYNDFKISLISSLSKEKQSNKYKI--DILADENYNSIAEGIYNNSFNVLKDTLSLINNEI 124 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L +C+ ++ +A+ I GIG S L AQ+ +K ++IG + A+ D H S +D Sbjct: 125 LDKCINLINNAKHIEFIGIGHSNLTAQDAKYKFLRIGKSVASHSDPHLFKMAASISDRED 184 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++ IS TG RE+ + G K +AIT + + A + L E+ + S Sbjct: 185 VIIGISQTGETREVIDSLQSAKVRGAKTIAITNNDKTEITKYADYVLLNGFNEELLETGS 244 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S +Q + +LL++ ++ ++ + A E + V Sbjct: 245 FSERISQLFIIELLYLGVLSKNKDKAMELKDLTIKAVT 282 >UniRef50_A7VQA6 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQA6_9CLOT Length = 290 Score = 269 bits (689), Expect = 6e-71, Method: Composition-based stats. Identities = 65/278 (23%), Positives = 131/278 (47%), Gaps = 4/278 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M RI+ Y L+ + KK+AD+++ PD A H++ QLA VS++SVV+F Q L Y Sbjct: 12 MGCTERIQATYSALSGASKKIADFVIDHPDQAVHMTVVQLAESCEVSEASVVRFCQCLQY 71 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF KL+L+ + S I I +D + EK+ A+ TL + + + Sbjct: 72 AGFYEFKLSLAAEIV----PASQMIQEDITVEDTEPTILEKVFAGEQQALQETLQMLNRQ 127 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 V + + ++ G + +AQ+ ++L++ G ++ D + L Sbjct: 128 DFISAVNHIAFSNKVEFFSCGNARPIAQDAHYRLLRTGIDSRIGIDDYDCLIHASMLRTG 187 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ + IS++G + +E + G + ITG + + + C+ + ++E S Sbjct: 188 DVAIGISHSGSTKNTIKMLEEAKKNGATTICITGMEKAPITRVSDICMVSHSKETMFRSM 247 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++++ AQ + D L +A+ + E + + + ++ ++ Sbjct: 248 AMASRIAQMAIIDALVVAVSFKRFERSKQYLTLTDKIL 285 >UniRef50_A5L3V2 Transcriptional regulator, RpiR family protein n=3 Tax=Vibrionales RepID=A5L3V2_9GAMM Length = 282 Score = 269 bits (689), Expect = 7e-71, Method: Composition-based stats. Identities = 107/281 (38%), Positives = 161/281 (57%), Gaps = 1/281 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M G+ +++ L+ SD +A Y+L P + LSS +LA GVSQS++VKF+QK+GY Sbjct: 1 MKGIAKVKALLPKLSPSDSLVARYVLDHPQQVKQLSSPELAKAVGVSQSTIVKFSQKIGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGF +K+ L ++ S IH I D V EKL+ T ++ T+ +N E Sbjct: 61 KGFSEMKVKLYQSDMSYQPVSQRGIHGTITRKDSPDTVMEKLLASKTQSLERTVLLNEGE 120 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L +L A +I ++G+GAS LVA++FA+KLMKIG A D H +A + + + Sbjct: 121 QLSNAADLLHLANKIQISGVGASSLVAKDFAYKLMKIGHAVHAEPDAHIQIANAASLTEN 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L+AISY+G RE+ A KV+ I+ +P+AL + A L + A+E S+ Sbjct: 181 DVLVAISYSGKTREVVKVAQLARSKKAKVIVISQLSPSALDKYADIKLISAADENHIRSS 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 SI+A +Q +TDLLFIAL QQ E A + I S++ V + Sbjct: 241 SITARDSQFYITDLLFIALTQQ-EEQADQLIEQSKSAVAEF 280 >UniRef50_D1YCB1 Transcriptional regulator, RpiR family n=3 Tax=Propionibacterium acnes RepID=D1YCB1_PROAC Length = 290 Score = 269 bits (689), Expect = 8e-71, Method: Composition-based stats. Identities = 72/280 (25%), Positives = 124/280 (44%), Gaps = 2/280 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L RI + ++ ++A +L +PD S+ QLA AGVS ++VV+F + LG Sbjct: 4 SLLPRIDMARTTMRPAEAQVAAVILAKPDWTLAASTSQLAEAAGVSPATVVRFCRALGMS 63 Query: 62 GFPALKLALSEALASQPESPSVP--IHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ L+ L+ L+ + I DD L + K+ + T Sbjct: 64 GYRELRTELARDLSRRTLELERSSVAEGTITLDDSLTQMITKIAFHEARTIENTARAVDA 123 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++L + + A R L G+G+SGLVA + + KL +IG +D H L Sbjct: 124 DELEAVASAISIAPRTALFGVGSSGLVASDLSEKLERIGLVCQHHQDTHMQLVHAALCKR 183 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 + L IS++G +E+ A + G +A+TG + + + A H L T A E + Sbjct: 184 PCVALGISFSGNTQEVVEALTVAQKHGATTVAMTGLPDSPVGRLADHVLVTSARETQVRA 243 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++S+ AQ + D LF + Q ++ + + V Sbjct: 244 GAMSSRMAQLAVVDFLFARVAQLCMDDLETLLSSTRTAVS 283 >UniRef50_A8RWE9 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RWE9_9CLOT Length = 301 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 71/276 (25%), Positives = 132/276 (47%), Gaps = 4/276 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R+ ++ L++ + + A+Y+ + + S LA AG S+++V + KLGY+G Sbjct: 25 LYDRVEEKRGSLSKKELETAEYMAAHQEQLIYSSITDLAERAGSSEATVTRVCGKLGYRG 84 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F ALK+ ++ L +P IH + D P ++ EK+ + T + + + Sbjct: 85 FQALKVGVAREL----TTPQEKIHENLEADSPAEVIIEKIFSSAIETLSMTQKSINVKAV 140 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + L ARRII+ G G S +A + K +++ NA A D H + V + + D+ Sbjct: 141 AASIDALCRARRIIIIGNGNSASIAADAQHKFLRLDLNAHAYTDDHMQMIAVSSMTDQDV 200 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 LLAISY+G R + AA + G V+++T + + + A CL T ++E + +I Sbjct: 201 LLAISYSGSSRNVVEAAHQAKEQGATVISLTNEGSSPVSKLADICLNTYSQETRYRTYAI 260 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 S+ A+ + D ++ + + + A E + Sbjct: 261 SSRMAELTIIDTIYTGVALRLGDKAIANFEALERAL 296 >UniRef50_B6GA31 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GA31_9ACTN Length = 281 Score = 267 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 82/273 (30%), Positives = 141/273 (51%), Gaps = 2/273 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L+R++Q + ++++L + +L P++ LS +LA A VS S++ + +KLG K Sbjct: 3 SLLVRLKQYRDNASPAERELIERILDDPESISGLSIHELAAYAFVSPSTITRLCKKLGLK 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + L LA ES S I + D R EK+ ++N ++ +N E Sbjct: 63 GYKEFQHLLIYDLALLRESSSSKIE-DLAPTDTSRQTIEKVTRDNIDSLRLVEKLNDPET 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 CV ++ AR I L G+GAS L A++ +KL++IG + + D H L S P+D Sbjct: 122 YEACVDLMSDARTINLFGMGASLLSARDMHYKLLRIGVSCNLIDDWHGQLLCASNSGPED 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT-PNALQQRASHCLYTIAEEQATNSA 240 L +AISY+G+ E+N+ GGKV+AITG + L ++A L + E SA Sbjct: 182 LSIAISYSGLTEEVNVCVGRARERGGKVIAITGSAFDSKLARQADEVLLVGSTEPLMRSA 241 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRH 273 ++++ Q + D+LF + + ++ E + Sbjct: 242 AMASRIGQLGVIDILFKSFVNRNYARFSEVLEQ 274 >UniRef50_C4DDH7 Transcriptional regulator, RpiR family n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DDH7_9ACTO Length = 342 Score = 266 bits (682), Expect = 4e-70, Method: Composition-based stats. Identities = 72/280 (25%), Positives = 123/280 (43%), Gaps = 2/280 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L+R+R GL S++++A+ +L P L+ +LA S ++VV+F Q++GY Sbjct: 12 VLVRVRAALPGLRPSERRIAEAILDDPHATAGLTVAELAAACDTSTTTVVRFYQRIGYGR 71 Query: 63 FPALKLALSEALASQP--ESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + L+L L+ + + I DD + + K+ T ++ T + + Sbjct: 72 YKDLRLDLTREATREQLETANLPAASGDIDRDDTIDDIIAKVAANETLSIADTAEILDRD 131 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L V + +ARR+ G+GASG V + KL +IG A + D A + Sbjct: 132 ALARAVDCVLNARRVDSFGVGASGFVGLDLQQKLTRIGRTALSWLDTDAAWSAAVTLDEQ 191 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 + +AIS+TG G +AIT AL + A L T A E S Sbjct: 192 CVAIAISHTGTTAATVEFLAMAAAEGATTIAITNHDNTALAETADVVLTTAARETRFRSG 251 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ + AQ M+ D LF + + + + +R + A V + Sbjct: 252 ALGSRIAQLMVVDCLFTGVARASYDASMSALRKTYAAVHR 291 >UniRef50_A8FIY5 Possible RpiR family transcriptional regulator n=4 Tax=Firmicutes RepID=A8FIY5_BACP2 Length = 286 Score = 266 bits (681), Expect = 6e-70, Method: Composition-based stats. Identities = 64/279 (22%), Positives = 139/279 (49%), Gaps = 3/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N IR + L+ + KK+A+Y+L P S LA+E S++++ +F +K+GY+ Sbjct: 8 NIFSHIRTTFHSLSPTQKKIANYILENPQKVVLHSISALASECNTSETTIFRFLRKIGYE 67 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + ++ +++ +A+ I+ +I D + + K+I+ T ++ ++ + Sbjct: 68 SYQVFRVHVAQDIATNT---PQSIYGEIEASDSVADIKHKVIELTTNSIQDMKHIVEDHA 124 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + + ++ A + + G GAS +A + K +++GF+ + D H + ++ D Sbjct: 125 VTQFIEQMKQAHKTVFFGAGASSFIAGDAYHKFLQLGFDVSLCSDPHMMNMIATHATEHD 184 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++AIS++G RE+ A G K+ +IT + + L +R+ L + + E S S Sbjct: 185 FIVAISHSGESREILDAVQFAKEKGAKIASITSYPKSELAKRSDFHLLSSSRETTYRSDS 244 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + Q ++ D+L++A + + A E ++ S V K Sbjct: 245 MISRINQLVIIDVLYVAAVLELGSNAIENVKRSRLAVAK 283 >UniRef50_C3RKW6 Sugar isomerase n=3 Tax=Bacteria RepID=C3RKW6_9MOLU Length = 291 Score = 266 bits (681), Expect = 6e-70, Method: Composition-based stats. Identities = 65/279 (23%), Positives = 124/279 (44%), Gaps = 3/279 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + ++ + S+K +A Y+L + +LS ++LA + S +++V+ +KLG Sbjct: 1 MSIMTQLEFELD-FSSSEKTIAKYILDNGEDILNLSVKELAKQTYTSPATIVRLCRKLGL 59 Query: 61 KGFPALKLALSEALA-SQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ K+ S L + V ++ D + ++ + A+ TLN+ Sbjct: 60 NGYGDFKIKYSAELQFDKKNKKRVDVNFPFGNTDSNSQIAYRIANLHQEAIEDTLNLVDF 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L + + +L ARRI L G G S L +F K+M+IG SP Sbjct: 120 KNLDKIINLLDQARRIYLFGNGNSLLAGFDFQHKMMRIGKMVEMRAHAGEQGFLSYTCSP 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-N 238 DD+ + ISY+G E+ A + ++ +L IT N L + ++ + T + E+ Sbjct: 180 DDVAILISYSGETNEMVELAKFLKKMHVPLLGITSIGDNQLSKYCTYIMNTGSREKIFSK 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 A S+ + L DL+F + + + + + + L Sbjct: 240 IAPYSSKTSISYLLDLIFSCIFRLNYDHYINEKINRDKL 278 >UniRef50_C8NZR0 RpiR family transcriptional regulator n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZR0_ERYRH Length = 280 Score = 266 bits (681), Expect = 6e-70, Method: Composition-based stats. Identities = 72/279 (25%), Positives = 140/279 (50%), Gaps = 4/279 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + RI++ ++K++A+Y+L D + SSQ A E S +++V+F++K+GY Sbjct: 1 MSCIYRIKENMHTYTDTEKRIAEYILENKDEVVNFSSQHFAKEINSSAAAIVRFSKKIGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+ L+ + + +S I+ +D + + K N T + + E Sbjct: 61 NGFTHLKVELARDHSEEEQS----FDKLIKEEDTIETMVRKSHYSNHRTFDNTYKLLNLE 116 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + + +ARRI L GIG SG+V Q+ K ++I + D H ++++ + + Sbjct: 117 VLDASIAAISNARRIYLLGIGGSGIVCQDLYHKFVRIDADVVYFDDFHLEMSSLTHITEN 176 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ +A+SY+G RE+ +A G +AIT N L + + + EE Sbjct: 177 DVTIALSYSGQTREIIMAQKLAQDKGATTIAITQVGRNELAKNSDFVINIPKEESEVRLG 236 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 SI++ + ++DLL++ + + ++E +I ++ +K Sbjct: 237 SIASRFSMLAISDLLYLGVAKNNIEETRRKIVNTRDTIK 275 >UniRef50_P46118 HTH-type transcriptional regulator hexR n=302 Tax=Gammaproteobacteria RepID=HEXR_ECOLI Length = 289 Score = 265 bits (678), Expect = 1e-69, Method: Composition-based stats. Identities = 63/280 (22%), Positives = 126/280 (45%), Gaps = 5/280 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L +I+ + + L++S++K+A+ +L PD A H S +A EA VS+ +V +F + + Sbjct: 1 MNMLEKIQSQLEHLSKSERKVAEVILASPDNAIHSSIAAMALEANVSEPTVNRFCRSMDT 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GFP KL L+++LA+ ++ + DD + K+ + A + + + Sbjct: 61 RGFPDFKLHLAQSLANGTPY----VNRNVNEDDSVESYTGKIFESAMATLDHVRHSLDKS 116 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ V +L A++I G+G+S VA + K + D+ + S Sbjct: 117 AINRAVDLLTQAKKIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNCSDG 176 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ IS+TG + L A V+A+T L + A+ + E Sbjct: 177 DVVVLISHTGRTKNLVELAQLARENDAMVIALTSAG-TPLAREATLAITLDVPEDTDIYM 235 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + AQ + D+L + + ++ + +K+ Sbjct: 236 PMVSRLAQLTVIDVLATGFTLRRGAKFRDNLKRVKEALKE 275 >UniRef50_Q2G836 Transcriptional regulator, RpiR family n=4 Tax=Proteobacteria RepID=Q2G836_NOVAD Length = 296 Score = 263 bits (674), Expect = 4e-69, Method: Composition-based stats. Identities = 73/278 (26%), Positives = 135/278 (48%), Gaps = 4/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L RIR ++++ K+A Y++ P +S LA S+ SV+ F + +G Sbjct: 19 NALTRIRSALPQMSKTAAKIAAYVVEHPADVVGMSITDLAALVDASEGSVINFCRSIGLG 78 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LKL+L++ + P IH + +D V K+ A+ +L+V + Sbjct: 79 GFQHLKLSLAQEIVQ----PVHFIHEDLEREDSTETVCRKVFHSGIQALRDSLSVLDPKA 134 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V ++R+ARR+ + GIG+S +A++ ++L++IG +A V D H + D Sbjct: 135 MAAAVDIIRAARRVEIYGIGSSAPIAEDAHYRLLRIGLDARVVIDSHVQAISASRCDKDV 194 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L IS++G E A G + + IT F + +Q A L+T+A E + + Sbjct: 195 AVLTISHSGSTNETVAATRLAHEAGARTIVITNFGRSPIQAYADVVLFTMARETRFRTEA 254 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +++ AQ + D L AL D + + + ++ + ++ Sbjct: 255 MTSRIAQLCVIDALIAALALADYDRSTDVLKQTFDVLS 292 >UniRef50_UPI000197C448 transcriptional regulator n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C448 Length = 286 Score = 263 bits (674), Expect = 4e-69, Method: Composition-based stats. Identities = 105/284 (36%), Positives = 162/284 (57%), Gaps = 3/284 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L I LA++ +K+A ++L P+ +LSSQQLA VSQS++VKF+QK+G Sbjct: 1 MTLLDIITYSLPRLAENQRKIAQFILENPENVLNLSSQQLAEILDVSQSAIVKFSQKVGV 60 Query: 61 KGFPALKLALSEALASQPES---PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 KG+PALKLALSE + Q P +HN+I DD L +V +KL E ++ T + Sbjct: 61 KGYPALKLALSEIIGRQQLKDGAPHSALHNRIAPDDNLMVVAQKLAMEKNHSITETTKLI 120 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 ++ V + ++R+ + GIG SGL A++ ++KL KIG D H +A Sbjct: 121 DFKQFERIVERIDQSQRVQIVGIGGSGLTAKDLSYKLQKIGITTLVESDHHVQIAAALTL 180 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 + D+ + IS+TG R+++ AA+ + G V+AIT + L Q A + L +IAEE Sbjct: 181 NTHDVQIVISFTGRRKDMLTAANIARKQGACVIAITRDCDSPLGQLADYVLESIAEEDEW 240 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+SIS+ AQ LTDL+F+AL+Q+ A + ++ ++ KL Sbjct: 241 RSSSISSRTAQNTLTDLIFMALLQRREAKAKSLVMNARVVINKL 284 >UniRef50_D0W145 Transcriptional regulator HexR n=3 Tax=Neisseriaceae RepID=D0W145_NEICI Length = 315 Score = 263 bits (674), Expect = 4e-69, Method: Composition-based stats. Identities = 78/276 (28%), Positives = 131/276 (47%), Gaps = 4/276 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +I + L+ +++K+A+ L +P H + ++A + VSQ +V++F + LGYKG Sbjct: 1 MLSKISESLADLSGAERKVAECALAKPKWFVHAAVAEIAEHSSVSQPTVIRFCRSLGYKG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 P KLALS ++ +H ++ DD + V EK++ A++ E +L Sbjct: 61 LPEFKLALSASIG---HEGMPYVHEELNADDDMSSVVEKVLGNAAASLLGERRFLKESEL 117 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + L ARR+ G+G SG+VAQ+ K + G + A D H L S +D+ Sbjct: 118 ENAIATLMHARRVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYVDTHTQLMAASVLSSEDV 177 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L+AIS TG EL A G ++A+T + L Q A L +E A + Sbjct: 178 LIAISNTGSSIELLDAVSIAKENGASIIALTRN-ESPLAQMADCVLSIATQENAELYTPM 236 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + Q + D+L I L + + A +++ S+ Sbjct: 237 VSRLLQLAVIDILAIGLALRLGDAASLQLQKSKKAY 272 >UniRef50_A9M040 RpiR/YebK/YfhH family transcriptional regulator n=24 Tax=Neisseria RepID=A9M040_NEIM0 Length = 282 Score = 263 bits (673), Expect = 5e-69, Method: Composition-based stats. Identities = 80/277 (28%), Positives = 131/277 (47%), Gaps = 4/277 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +I + L+ +++K+A+ L +P H + ++A A VSQ +V++F + LGYKG Sbjct: 1 MLSKISESLANLSGAERKVAECALAEPKWFVHAAVAEIAERASVSQPTVIRFCRSLGYKG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 P KLALS ++ +H ++ DD + V EK++ A++ E +L Sbjct: 61 LPEFKLALSASIG---HEGMPYVHEELNADDDMASVVEKVLGNAAASLLGERRFLKESEL 117 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + L ARR+ G+G SG+VAQ+ K + G + A D H L S D+ Sbjct: 118 ENAIATLMHARRVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYVDTHTQLMAASVLSDQDV 177 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L+AIS TG EL A G V+A+T + L Q A L +E A + Sbjct: 178 LVAISNTGSSIELLDAVSIAKENGASVIALTRN-DSPLAQLADCVLSVATQENAELYTPM 236 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + Q + D+L I L + + A +++ S+ + Sbjct: 237 VSRLLQLAVIDILAIGLALRLGDAASLQLQKSKKSIH 273 >UniRef50_Q184N2 Putative phosphosugar-binding transcriptional regulator n=4 Tax=Clostridium difficile RepID=Q184N2_CLOD6 Length = 283 Score = 263 bits (672), Expect = 8e-69, Method: Composition-based stats. Identities = 77/281 (27%), Positives = 150/281 (53%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ +L+++Q Y+ L + DKK+ADY+L + LS +LA+ + S +S+V+F++K+GY Sbjct: 1 MSCILKLKQIYEDLTEVDKKIADYILNNTEAISKLSVSELASNSKTSTASIVRFSRKMGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+ +++ L + + + D + V K+ +N + T +N ++ Sbjct: 61 SGFGDLKIEIAKDLMGKENEYT---YVDENYDCNIDSVINKITNKNIETINQTRLLNEKD 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + E V + A+ + + G+G S LVA + KL++I A D H L + Sbjct: 118 IIKEAVEQIIKAKNVYIFGVGGSALVALDLQMKLLRINKQAFTSLDSHTQLMVSSNVDKE 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ +AISY+G +E+ + + G KV+ IT ++ N L + + L E+ Sbjct: 178 DIAIAISYSGESKEVIKSIENAKLKGCKVICITKYSDNHLSKISDLKLVVPNIEKRLREG 237 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +IS+ A L D+++I++IQ++L A ++++ ++ ++ L Sbjct: 238 AISSRIAMLTLIDIIYISIIQENLNEAEQKLQETKRILDYL 278 >UniRef50_Q3JNN8 Transcriptional regulator, RpiR family n=54 Tax=Burkholderiaceae RepID=Q3JNN8_BURP1 Length = 339 Score = 262 bits (671), Expect = 8e-69, Method: Composition-based stats. Identities = 71/278 (25%), Positives = 129/278 (46%), Gaps = 5/278 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RI L S++KLAD++L P LS +LA AG SQ ++ +F Q LG G Sbjct: 8 MLPRIETIRAQLRPSERKLADFVLAAPREVLDLSMTELAARAGASQPTIARFCQALGCSG 67 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F K+ L++++A ++ + D+ + K+ A+ N S + Sbjct: 68 FREFKIRLAQSVA----PGVASVYRDVEPDERAPGIIGKVFDRTIGALIEVRNSLSATSV 123 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 E + +L A RI G G SG+ AQ+ K ++G + A D H + +D+ Sbjct: 124 AEAIELLTRASRIEFYGAGGSGIAAQDIQHKFFRLGVPSVAYSDPHTFSMSAALLGANDV 183 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++AIS TG R++ AA L G KV++IT + L Q ++ L + E+ + + Sbjct: 184 VVAISNTGRTRDIVDAARAALACGAKVISITHS-HSPLAQLSTVSLASNVAEETDVFSPM 242 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ + + D+L + + + +R+ ++ + + Sbjct: 243 TSRMSHLAIGDILAVGVALRRGPELVDRLGRAKEAITR 280 >UniRef50_A8F3D9 Transcriptional regulator, RpiR family n=1 Tax=Thermotoga lettingae TMO RepID=A8F3D9_THELT Length = 276 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 66/283 (23%), Positives = 135/283 (47%), Gaps = 13/283 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + I+ + + + +LA +++ PD H+S ++ +E + Q +VV+F QKLG+ Sbjct: 4 DVQTIIKANQKQFTKKENELAQFVIDHPDEVIHMSITEIVDELRIGQGTVVRFCQKLGFS 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN--SE 119 GF K+AL+++L Q E+ + + + + +++ A+ T + +E Sbjct: 64 GFHPFKIALAKSLGRQEEAS-----------EGSKDMLAMVKEDHIKAIEETSKLLKLNE 112 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + +++C + + RR+ L G+GASG+ A + +K M+IG + + D H ++ + Sbjct: 113 KVVYQCAEKISNCRRLYLLGVGASGVTALDAYYKFMRIGVDVKYMLDPHFQAMSLSGCNE 172 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D ++A S +G + A + V+A+TG+ + L A L T E S Sbjct: 173 KDCVVAFSQSGSTAVVVDMAQIAKQNKACVIAVTGYNKSPLTFYADFVLLTAVRENPFQS 232 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 +I + AQ + ++LF + A + + + V+K + Sbjct: 233 GAIRSKIAQLHVLEVLFEQTKLLLADKAKQNVDRTARSVEKWI 275 >UniRef50_P37767 Uncharacterized HTH-type transcriptional regulator yfhH n=149 Tax=Enterobacteriaceae RepID=YFHH_ECOLI Length = 282 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 282/282 (100%), Positives = 282/282 (100%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY Sbjct: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE Sbjct: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD Sbjct: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA Sbjct: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV Sbjct: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 >UniRef50_B9K581 Transcriptional repressor of rpiB expression; transcriptional repressor of ribose catabolism (RpiR/YebK family) n=3 Tax=Proteobacteria RepID=B9K581_AGRVS Length = 291 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 69/274 (25%), Positives = 129/274 (47%), Gaps = 4/274 (1%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 RIR L + K+ D + D + S +Q+A AGVS++ VVK +KLG+ GF Sbjct: 14 RIRMMMPMLTPLEAKVVDTVFGMRDFSEETSLKQIAENAGVSEAMVVKITKKLGFSGFRD 73 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 + ++S+ P+ +H ++ DD + +K+ + + A+ TL + + Sbjct: 74 FRSSVSQY----NRQPTTEMHQELSVDDTSLEIVQKVFRTSIHALEETLAILDMAAFDQA 129 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 M+ AR G+G S +A++ A K ++IG A+ D H +L + + D+ + Sbjct: 130 ADMIHKARNRDFYGVGGSAQIARDVAHKFLRIGVRASVFDDSHMMLMSAALLADTDVAIG 189 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 S++G + A + G +A+T + +AL Q A L + A+ + +A Sbjct: 190 FSHSGNTIAVIEALQLARKNGASTIAVTNYGSSALAQSADVVLCSTAQGSPLMGENAAAR 249 Query: 246 HAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 AQ + D +F+A+ Q+D + A + + + V Sbjct: 250 IAQLNILDAIFVAVAQRDYQAAERNLDRTMSAVT 283 >UniRef50_D1AUV3 Transcriptional regulator, RpiR family n=5 Tax=Bacteria RepID=D1AUV3_STRM9 Length = 272 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 126/268 (47%), Gaps = 11/268 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + I+ Y ++ + K+ADY++ + D + ++ + VS++++V+F +K+G+ Sbjct: 1 MKYITLIQSFYPSFSKQEIKVADYVIKEKDAICFMPLHEITKKINVSEATIVRFVKKIGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGF KL ++ +A+ + + H E + + T N+ ++E Sbjct: 61 KGFIDFKLEVAREIATIEDERNTKEHY-----------IENIEYNIIETIKNTKNLINKE 109 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + + +++++ + G+GASG+ A F + M+ G +V D H + ++ Sbjct: 110 DVENAIEAIENSKKLYVFGMGASGVAALEFQNRFMRFGKIGHSVSDGHFQVMYASTTTEK 169 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ IS +G +L G K++AIT + + + + + + T +E N Sbjct: 170 DVIVVISLSGETVDLIYPLSIAKENGCKIIAITNYILSPIAKLSDIVILTSGKETLLNGG 229 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAP 268 ++ + +Q + D+L ++ + A Sbjct: 230 ALVSKMSQLYIIDVLATGYALRNSKKAK 257 >UniRef50_A4EAC5 Putative uncharacterized protein n=2 Tax=Collinsella RepID=A4EAC5_9ACTN Length = 283 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 73/260 (28%), Positives = 119/260 (45%), Gaps = 2/260 (0%) Query: 15 AQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEAL 74 + +++ + Y+ P LS + LA+ S SS+++F ++LG+ G+ + L L Sbjct: 17 SPAERNVIAYVSAHPHEVVGLSVRGLADVTFSSPSSILRFCKRLGFAGYKEFQRELIAEL 76 Query: 75 ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARR 134 A + V + I DD + + K++K N + AT L C L+ AR Sbjct: 77 ALLGDKKDVALE-DISMDDSVERIVGKVMKSNVRTIEATARTLDYTVLERCAARLKRARA 135 Query: 135 IILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRE 194 + L GIGAS LVA + A KLM++ D H L + D+ +A SY+G+ +E Sbjct: 136 VNLFGIGASRLVAHDLAQKLMRVDKECRLYDDWHDQLLCAKNMHEGDMAIAFSYSGLTQE 195 Query: 195 LNLAADEMLRVGGKVLAITG-FTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTD 253 + E R V+A+T + L A L A E S ++++ AQ M+ D Sbjct: 196 VLDCTAEAQRHNCPVVAVTKVDGSSKLATMADAVLGVAASEPLVRSGAMASRMAQLMVVD 255 Query: 254 LLFIALIQQDLELAPERIRH 273 L+ A + D E A I+ Sbjct: 256 ALYAAYVASDYERATHVIKQ 275 >UniRef50_A1AYM0 Transcriptional regulator, RpiR family n=3 Tax=Proteobacteria RepID=A1AYM0_PARDP Length = 287 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 71/275 (25%), Positives = 135/275 (49%), Gaps = 4/275 (1%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 +IR + L + ++ D + + D + +Q++ +AGVS + VVK A+KLG+ GF Sbjct: 12 AQIRMKLPFLTPLEARVVDTITGRNDLDLTTALRQVSEDAGVSDAMVVKIAKKLGFNGFR 71 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 + AL ++ +H++I +D + K+ + + A+ T+++ Sbjct: 72 DFREAL----VVYRQTDVASLHSEISPEDSSADIIRKVFQTSIQALEETMSIIDVSAFDR 127 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 T+L AR+ G+G S +A++ A K ++IG A D H +L + P+D+++ Sbjct: 128 AATLLHGARQRDFYGVGGSAQIARDVAHKFLRIGLRAGVQDDPHMMLMSAALLGPEDVVV 187 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 A S++G + AA + G +V+AIT + L + A L + A+ + +A Sbjct: 188 AFSHSGTTSNVIEAARLARQQGARVIAITNYATAPLSELADIALCSTAQGSPLLGENAAA 247 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 AQ + D +F+A+ Q+DLE A ++ + V Sbjct: 248 RIAQLNIMDAIFVAVAQRDLERAEAQLARTRNAVD 282 >UniRef50_C4KZ09 Transcriptional regulator, RpiR family n=85 Tax=Bacillales RepID=C4KZ09_EXISA Length = 301 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 74/280 (26%), Positives = 134/280 (47%), Gaps = 2/280 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +I + + +KK+ADY+L ++++++LA + VS++S+V+FA+ +G Sbjct: 22 SLLTKIDLAKEDMTAVEKKIADYILSHSTLIPNMTTKELAQKTDVSEASIVRFARVVGID 81 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F A KLAL + LA + + N ++ D +K+I N AA+ A + + Sbjct: 82 SFKAFKLALVKDLAVTETTLTD--FNVLQQKDTPYDSFQKVIHVNKAAIEACAEAMDKRE 139 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V + A R+I G+G S A + +K K+G+ A D H +L+ + D Sbjct: 140 LEHAVDLFARASRVIFYGVGGSSTAAIDAQYKFTKLGYAATTSPDFHYMLSLIPHLGKSD 199 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + +AIS +G +++ + V+AIT + L + A L T E AS Sbjct: 200 VFVAISTSGRTKDVLELVRFAKKKRVPVIAITNLDKSPLYREADVRLCTPNVESDFRIAS 259 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 I++ Q + D L++ L+ + E +R + + KL Sbjct: 260 IASRMTQLTIIDTLYMGLLHRKGEGLIDRYAEARDEMVKL 299 >UniRef50_UPI000196C511 hypothetical protein CATMIT_02677 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196C511 Length = 286 Score = 260 bits (666), Expect = 3e-68, Method: Composition-based stats. Identities = 68/279 (24%), Positives = 138/279 (49%), Gaps = 5/279 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN +RI++ ++K +A+Y+L S+Q L + S +++++F++K+G+ Sbjct: 9 MNAYIRIKEYNDSYTATEKLIAEYILEN--DILQDSAQALGEKTNTSAAAIIRFSKKIGF 66 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGF LK+ L+++ + + I +D + + EK + N + T + + + Sbjct: 67 KGFSDLKMNLAQSTKEEKQQEVDLI---FEPEDNISTLVEKGCRLNMNTVLKTYQLINID 123 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L E + +L +A I L G+G S ++ + KLM+IG D+H + Q+ + Sbjct: 124 TLEESIDLLNNASTIYLFGVGGSSVIGLDIYQKLMRIGKKVIYNADLHVQMTFAQSMDQN 183 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D L ISY+G L A + V++IT N + + +++ L +EE+A Sbjct: 184 DAALIISYSGSTTGLVDVARVLHEKQIPVISITQINANPISKLSTYSLKVPSEEKALRIG 243 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++S+ + ++TDLL+ + +++ E + + S+ V Sbjct: 244 AVSSRISSFVITDLLYYGVFKKNFEEHKKNLIDSKDNVS 282 >UniRef50_Q04DU1 Transcriptional regulator n=2 Tax=Oenococcus oeni RepID=Q04DU1_OENOB Length = 282 Score = 260 bits (665), Expect = 4e-68, Method: Composition-based stats. Identities = 73/279 (26%), Positives = 133/279 (47%), Gaps = 4/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N IR Y+ L +K++ADY+L D+ + Q L+++ G+S +S+ +F + LGY Sbjct: 3 NVTETIRSYYEKLHPGEKRIADYILSHQDSVMDATIQSLSDKIGISTASISRFTRHLGYP 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F +ALS + ++ S +I+ D + +KL AA+ AT + + Sbjct: 63 NFRDFLIALSAS----KKNSSSDFFTEIKQSDQSEQIVKKLFSAGIAALTATAANINMKD 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V L S+ +I GIG S +VA N K ++ N + D + + +D Sbjct: 119 LDRVVDWLVSSNKIGFFGIGGSSIVAFNAYHKFLRTNLNIVSHPDYDIQIMQAAHLTSED 178 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L + IS++G ++ L +++ G K++AIT F + + + A L + +EE S Sbjct: 179 LGIVISHSGRNQDTLLVENKLRENGSKIVAITAFPESPIAKNADIVLNSYSEEVNFRQES 238 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +S+ AQ + D LF + + E + I ++++ Sbjct: 239 MSSLVAQITIIDTLFTLVGHRLNEQTDQVINSMRRVIEQ 277 >UniRef50_C3RM33 Sugar isomerase n=2 Tax=Bacteria RepID=C3RM33_9MOLU Length = 312 Score = 260 bits (665), Expect = 4e-68, Method: Composition-based stats. Identities = 59/282 (20%), Positives = 126/282 (44%), Gaps = 3/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L ++ + S+K +A Y+L ++S+ QLA S +++ + QKL Y Sbjct: 1 MSLLRKLEMAVD-FSTSEKLIATYILKNGPDVLNMSTSQLAKATYTSPATITRLCQKLEY 59 Query: 61 KGFPALKLALSEALASQ-PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 KG+ K+ALS L + + + D + + + ++ T+N Sbjct: 60 KGYNDFKIALSAQLQYTFDRNSETNPNFPFKKRDTIHTIKHSIATLAKDSINLTVNNIDN 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L + + ML A+ I + G+ +A +F +K+ +IG N ++ L S+ Sbjct: 120 DILAKIIIMLDQAKVIDIYGVSGPLRIASDFQYKMFRIGKNVQIAPMVNEQLFQAAQSNK 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-N 238 D + ISY+G E+ AA+ + R ++AIT F + L + + L+ + E+ Sbjct: 180 DHCAILISYSGETNEVIAAAELLKRRKVPMIAITSFGESRLSKLCDYVLFLDSRERIYSK 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ + + ++ D+++ L + + E ++ ++ Sbjct: 240 VSTFGSTISIHIMLDIIYSCLFARHYDENLELKLETDHIIDH 281 >UniRef50_C2D9S0 RpiR family transcriptional regulator n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9S0_9ACTN Length = 282 Score = 260 bits (665), Expect = 5e-68, Method: Composition-based stats. Identities = 65/272 (23%), Positives = 128/272 (47%), Gaps = 2/272 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L+ +++ ++ S++++ Y+L +P+ ++ +LA VS +++ + +KL Sbjct: 5 SLLVLLKENKDRVSTSEQQIITYILKKPEAIVGVTIHELAQMTFVSAATISRLLRKLSLG 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + L LAS S I I D + + K++++ ++ T +N+ + Sbjct: 65 GYKEFQQYLIYELASMKTSRQSSIE-DINPKDSTKQIMFKIMRKTIESITLTEKLNNPKT 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + C ++ +AR I + G+G+S L AQ+ +K ++ + D H L S D Sbjct: 124 IDSCAELIHNARHITIFGMGSSLLSAQDLQYKFLRANIDCTLSADWHMQLIAANNMSDGD 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNA-LQQRASHCLYTIAEEQATNSA 240 + +A SY+GV E GGKV+AIT + L + A LY + E S+ Sbjct: 184 VAIAFSYSGVTPETLRCVHAAQDHGGKVIAITRSVNSTELVRHADIVLYVASTEPLLRSS 243 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIR 272 + ++ Q M+ D LF L+ + ++ I Sbjct: 244 AGTSRITQLMIVDTLFSTLVNKHYDVYATAIE 275 >UniRef50_A9BXM8 Transcriptional regulator, RpiR family n=16 Tax=cellular organisms RepID=A9BXM8_DELAS Length = 323 Score = 259 bits (664), Expect = 5e-68, Method: Composition-based stats. Identities = 67/281 (23%), Positives = 115/281 (40%), Gaps = 9/281 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RI LA +++++A +L P ++LA A VS+ +VV+F + +GY G Sbjct: 43 MLDRITASLPSLAPAEQRVARLVLADPRAFARQPVRELAERAHVSKPTVVRFCRSMGYDG 102 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 KL L+ +++ IH + DD V K++ AA N S + Sbjct: 103 LADFKLKLAGSVSEGVPF----IHRSVDTDDKTSDVMVKVVDNAVAAFLQYRNAASTTAI 158 Query: 123 HECVTMLRSA----RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 + + S RRI G G SG+VAQ+ K ++G + A D H + + Sbjct: 159 EQAAQAIASTWQTGRRIEFYGAGNSGIVAQDAQHKFFRLGVTSLATSDGHMQVMSATLLG 218 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P D + IS +G R+L AAD + G +AIT + L L E Sbjct: 219 PGDCAVIISNSGRTRDLMDAADIARKNGATTIAITASG-SPLASACHIHLAADHPEGYDR 277 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + + + ++ D+L + + + + ++ Sbjct: 278 YSPMVSRLLHLLVIDVLATCVALRIGPALQPALEQMKNNLR 318 >UniRef50_C1I531 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I531_9CLOT Length = 284 Score = 259 bits (664), Expect = 6e-68, Method: Composition-based stats. Identities = 69/272 (25%), Positives = 135/272 (49%), Gaps = 1/272 (0%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 L +++ K+ DY+ +++ +++ ++AN GV +++V +F +KLG++ F K+ + Sbjct: 9 RSELTKAENKICDYIEEYMNSSIYMTVTEIANNCGVGEATVTRFCRKLGFRSFLEFKMTM 68 Query: 71 SEALASQPESPSVPIHNQI-RGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTML 129 ++ + I +++ +D L +K + N ++ TL + E +L Sbjct: 69 AQEFKNSGYDNEDIIESEVVSENDSLGEFVKKFYEINVNSLEETLKKIDYSMIEEISDIL 128 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYT 189 A+RI TG+G SG++A++ +K MKIG RD H L+ D+L IS + Sbjct: 129 VKAKRISFTGVGHSGIIAEDAYYKFMKIGLICNCYRDSHTLVMMASLMKEGDVLFIISNS 188 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQG 249 G E+N+AA+ KV++IT + L + + + L +E + S +Q Sbjct: 189 GNTEEINIAAEIARENNVKVISITENLLSKLARVSDYVLNYTDQEIKIDMESFGIRISQN 248 Query: 250 MLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 L DL+ +I+++ E+A +E ++KL Sbjct: 249 FLIDLICTNVIRKNKEIAVVSKSKTEKAIEKL 280 >UniRef50_C2D3P4 RpiR family transcriptional regulator (Fragment) n=3 Tax=Lactobacillus RepID=C2D3P4_LACBR Length = 281 Score = 259 bits (662), Expect = 9e-68, Method: Composition-based stats. Identities = 60/273 (21%), Positives = 119/273 (43%), Gaps = 3/273 (1%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 ++Q + L++++KK+A Y++ P A + + LA S +SV + + LGY F Sbjct: 8 LKQSFDNLSRTNKKIAKYVIDNPQAASEANIEDLAAVTETSTASVSRLVKTLGYSNFREF 67 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 L+L+ +Q ++PI I +D L + +K+ + A+ T E + V Sbjct: 68 TLSLA---YTQLRPQNLPIFKDIDANDTLSTIADKIFTSSQRALQDTREGIDENEFARSV 124 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 + RR+ G+G S + A + K ++ + D L DD + + Sbjct: 125 LRIIHCRRLGFFGLGGSSVAALDGYHKFLRTSIDCFYYPDFDVQLMQAVKLGEDDCAIVV 184 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S++G R+ A+ + R V+AIT + + L + + ++E S + + Sbjct: 185 SHSGKNRQTIKIAETLKRRKVPVIAITSYQDSPLVGHSDITFISSSDESNYRSEGMYSLL 244 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 AQ + D LF+ + + IR + +++ Sbjct: 245 AQLTIIDTLFMMATVRMGPATEDTIRSVQNIIE 277 >UniRef50_B8KWX3 Bifunctional protein glk n=3 Tax=unclassified Gammaproteobacteria RepID=B8KWX3_9GAMM Length = 337 Score = 259 bits (662), Expect = 9e-68, Method: Composition-based stats. Identities = 69/278 (24%), Positives = 112/278 (40%), Gaps = 5/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L I Q GL +S+ K+A +L PD A +S LA+ AGVS+ SV +F ++ G Sbjct: 52 NLLEDINQSLPGLNKSEVKVAQAILSDPDAATRMSIASLASRAGVSEPSVNRFCKRFGAS 111 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GFP KL L+ ++ S S + D + KL +A+ A Sbjct: 112 GFPDFKLRLATSMVSGVRYISRAVEF----SDDIDTYPGKLFDNAISALVAAKEQLPTGD 167 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V L ARRI G+G S V ++ K + +D A S D Sbjct: 168 IARAVDFLAQARRIHFFGLGTSAAVTKDAEHKFFRFNVPVTNHQDPLMQRMLAAAGSVGD 227 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + IS+TG R L A+ + V+++T + L Q + + E Sbjct: 228 VFFIISHTGRTRALVEVAELARQTEATVVSLTA-PQSPLAQESDCAITLTIGENTEEYLP 286 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +++ Q + D+L + + E + + +K Sbjct: 287 MTSRLVQLAVIDVLATGVTLRRGERFLPHLARIKDSLK 324 >UniRef50_A4VXR0 Transcriptional regulator n=5 Tax=Streptococcus suis RepID=A4VXR0_STRSY Length = 275 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 75/279 (26%), Positives = 131/279 (46%), Gaps = 7/279 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + + L ++ KL DY+ ++ QLA+ AGVS +++ + ++K+GY Sbjct: 1 MN-RNILNHSIENLTPTENKLLDYIEENIHRIETMNIYQLADNAGVSTATISRISKKMGY 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F LK+ ++++ ++ D + + KLI T + T++ + E Sbjct: 60 SNFNKLKIEIAKS------KYDDLLNAHFTPSDSIDDISTKLIHSITISNQQTVSFLNLE 113 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L V +L+SA RI L G+GASG+V +F +KL +IG +D H +A + + Sbjct: 114 ELEAAVKLLQSASRIYLFGVGASGIVCSDFYYKLSRIGKTCIFAQDTHIQMANIATAGNG 173 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL + ISY+G+ +E+ G + ITG N L A E Sbjct: 174 DLAIGISYSGMTKEVVEPLRFAKENGVSTITITGTGKNQLADLADITFRIPRHEHELRVG 233 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +I++ LTDLL++ALIQ + + ++ L + Sbjct: 234 AITSRSNSLFLTDLLYLALIQDHKQEITAILEQTKHLTE 272 >UniRef50_A0AJB4 Complete genome n=7 Tax=Bacillales RepID=A0AJB4_LISW6 Length = 283 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 74/281 (26%), Positives = 126/281 (44%), Gaps = 5/281 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + RI L S+KK+ +L P+ S +LA +A S ++VV+F + +G + Sbjct: 5 SIINRIEGILHDLPTSEKKIGQTVLANPEFTTTASIHKLAQKADASGAAVVRFCKSIGLQ 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 FP LK LS LA P + I ++ + +KL+ M T + E K Sbjct: 65 SFPELKRQLSLDLAQ----PQKIGYYDIEPNEDFHTITDKLVSNMMQTMNDTASQLDETK 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + +L A I G+GAS LVA++ + K ++ G + A +D H L Sbjct: 121 VLTACDLLGDADTIYTYGVGASWLVAEDISQKWLRAGKHVLATQDAHVLAMAFATGKRKS 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSA 240 + +AIS +G E+ D+ V+++T F N L+++A L T A E S Sbjct: 181 VFIAISNSGETSEVLQLVDQAKLNDVTVISLTRFGNNKLKEKADLALETSRAPEAEIRST 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + S+ AQ ++ D+LF + ++I+ S + Sbjct: 241 ATSSRQAQLLVVDILFYYYASHHYDEMIQQIKQSREATNRF 281 >UniRef50_C1XRD4 Transcriptional regulator n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XRD4_9DEIN Length = 264 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 72/265 (27%), Positives = 122/265 (46%), Gaps = 6/265 (2%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 + + +++A Y+L D + + ++A+ AG S++SVV+F + LG++GF KLAL+ Sbjct: 1 MTPALERIAQYVLHNADQVIYQTVIEVADAAGSSEASVVRFCRDLGFQGFQDFKLALASD 60 Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR 133 L + S I + + + + + T + + + L E V + AR Sbjct: 61 LVT-----SPVILPKQEKPTSAQSTADYVYNTARQVLDETRRLMNVDLLEEVVERILKAR 115 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRR 193 RI G+G +G AQ+FA KL ++G A A D H+ + P DL IS +G Sbjct: 116 RIDFYGVGNAGTTAQDFAQKLQRLGCAAIAYPDPHSAAVSAATLGPKDLAFGISVSGSSI 175 Query: 194 ELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTD 253 + A ++ G +A+T + + + A L T A E S+ A +Q ML D Sbjct: 176 DTVKALEQAKLAGAYTVAVTRGARSPITRFADAVLLTSAPESPLTRGSMGAKISQLMLLD 235 Query: 254 LLFIALIQQDLELAPERIRHSEALV 278 LF + + A E + + A V Sbjct: 236 FLFTRTALRHPKGA-ELLSKTAAAV 259 >UniRef50_A6UCC0 Transcriptional regulator, RpiR family n=4 Tax=Proteobacteria RepID=A6UCC0_SINMW Length = 296 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 68/280 (24%), Positives = 113/280 (40%), Gaps = 5/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L IR R L +SD+K+A+ +L P + + + A AGVSQ +V++F +G + Sbjct: 16 NILEVIRLRRADLRKSDRKVAELVLADPKRVINATIAEAAEWAGVSQPTVIRFCASIGCQ 75 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ KL L+++LA + H+ I D V K+ ++ N + Sbjct: 76 GYQDFKLRLAQSLALGMSAT----HSVIDASDTPAQVSAKIFDYTITSLDWVRNHLDPVQ 131 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + L A RI G GASG+VA++ K G A D H + V P D Sbjct: 132 VSRAIDALSKASRIEFFGFGASGIVARDAQQKFPLFGVPCGAETDAHQQIMVVSMLKPGD 191 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS TG + A G +V+ I G L + L E Sbjct: 192 VAVVISNTGATLAIIETARRARESGCQVIGIVGS-DGPLVEFCDIVLMVETLENTNIYTP 250 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + A + D+L ++ + + + ++ L Sbjct: 251 TISRIAALTVIDILSTSVALRRGAEHVDLFTGMKRNLRYL 290 >UniRef50_P26833 Uncharacterized HTH-type transcriptional regulator CPE0189 n=15 Tax=Clostridiales RepID=Y189_CLOPE Length = 279 Score = 257 bits (657), Expect = 4e-67, Method: Composition-based stats. Identities = 67/278 (24%), Positives = 143/278 (51%), Gaps = 2/278 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L ++ +S+K L +Y+ D + S +A E+GV ++++ +F +KLG+ Sbjct: 1 MGILEQLENPKFKATKSEKTLIEYIKSDLDNIIYKSISIIAKESGVGEATITRFTKKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF K+ L++ ++++ + + +H + D+ + K++K + + T+ + Sbjct: 61 NGFQDFKVTLAKEISNKKNTSIINLH--VHRDESVTETANKMLKSSINILEQTVKQIDLD 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + +C ++ +A+R+ GIG SG+ A + +K M+IGF V D H ++ ++ D Sbjct: 119 LMCKCRDLIMNAKRVYFIGIGYSGIAATDINYKFMRIGFTTVPVTDSHTMVIMSSITNDD 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++AIS +G +E+ + G K++ +T + N L++ + + L + E + Sbjct: 179 DVIVAISNSGTTKEVIKTVKQAKENGTKIITLTEDSDNPLRKLSDYELTYTSAETIFETG 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 SIS+ Q L DLL+ +I++ A E+ + + + Sbjct: 239 SISSKIPQIFLLDLLYTEVIKEMFSEAVEKKIKTTSAI 276 >UniRef50_Q02VU4 Transcriptional regulator n=4 Tax=Lactococcus lactis RepID=Q02VU4_LACLS Length = 282 Score = 256 bits (656), Expect = 5e-67, Method: Composition-based stats. Identities = 65/281 (23%), Positives = 135/281 (48%), Gaps = 6/281 (2%) Query: 1 MN--GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 M+ + RIR Y L++SD+ ++DYL+ D+A LS Q+ A + VS +++ +F++K+ Sbjct: 1 MSRTLISRIRSYYDNLSKSDQAISDYLIANIDSAAMLSIQEFAQKTQVSTATISRFSKKI 60 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 G+ F LKLA+ + + +++ D + + K N +++ +TLN+ S Sbjct: 61 GFNSFQELKLAI----HATDSTRDDEFFSELSPTDDYKEILTKNFNGNISSLNSTLNLIS 116 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 +L + + +L A G+G S VA K +++ + +D H + Sbjct: 117 NRQLDQTMEILLKANTCGFFGLGGSNAVALIAFHKFLRMPLHCVYHQDFHFQQMQAAKLT 176 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 +D IS+TG ++ + + G ++A+T F + L + A L +I+EE + Sbjct: 177 SEDCAFVISHTGKNKDTMHLVEILKSRGVPIIALTSFASSPLAKAADVALISISEEISFR 236 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++++ +Q L D LF+ + +++ + ++ Sbjct: 237 PEAVASTVSQISLLDALFMMYGMKMKDVSEGTLSEIRKVIS 277 >UniRef50_C5CG85 Transcriptional regulator, RpiR family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CG85_KOSOT Length = 275 Score = 256 bits (655), Expect = 6e-67, Method: Composition-based stats. Identities = 61/277 (22%), Positives = 140/277 (50%), Gaps = 7/277 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +++++ Y L++S++++A Y++ +PD H + +LA + S+++V + +KLG+ G Sbjct: 2 IIVQLKGIYDSLSESERRVAKYIIERPDDVIHYTITELAKFSHSSEATVYRLVKKLGFSG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + + K++L+ L+ E + + E++++EN + T+ V + L Sbjct: 62 YQSFKISLARELSIPQEVIEE------GSEGSYQNFVERIVQENISLAKETMAVLDLDAL 115 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V ++ +ARR++ G+G S +VAQ+ ++ +GF++ D HA + + +D+ Sbjct: 116 KKAVELIINARRLVFFGVGRSAVVAQSGSFNFALLGFSSTHYIDPHAQVMVASGLTNEDV 175 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ IS+TG R+ + G K + IT + + + LYT A + + S Sbjct: 176 VVGISHTGTIRDTVKSVQVAHAAGAKTIVITSGINSPITEVGDVVLYTAA-GKPSTSEFT 234 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + + ++ D+L+ ++ + E + E ++K Sbjct: 235 VSRIGEFLILDILYKTVVARMSERLSKHFDKLEEILK 271 >UniRef50_C0D4M2 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D4M2_9CLOT Length = 282 Score = 256 bits (654), Expect = 8e-67, Method: Composition-based stats. Identities = 67/278 (24%), Positives = 135/278 (48%), Gaps = 3/278 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 IR +Y L+ S K +ADY+L PD + ++A VS+++V++F KL Y Sbjct: 5 IFSLIRTKYNTLSSSQKDVADYILTNPDKVMMNTLNEIAAACRVSETTVLRFLHKLNYNS 64 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + ++ L++ L+ + +++ + D + +K+I +++ + + + Sbjct: 65 YQLFRINLTQELSKDNQET---VYDDVGFQDTEDEIIDKIIHSTVSSITDSRQIIDPASV 121 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V + ARRI++ G+GASG +AQ+ KL+K+G NA D H + + + Sbjct: 122 KAVVEKIAGARRIVVAGVGASGFIAQDLYHKLIKLGLNAVCANDPHIMNILATGLDQNTI 181 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L+ S++G RE+ A +V A+T + + L +A + L + + E S ++ Sbjct: 182 LILFSHSGESREVLDMAAIAKERRCQVCAVTSYAKSTLANQAGYLLCSSSRETMFRSDAM 241 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ Q ++ D+L+++L+ + +I S V K Sbjct: 242 TSRIVQMVIIDILYVSLVIALGDGILPQIHSSRLAVAK 279 >UniRef50_Q38YX9 Gluconate operon transcriptional regulator, RpiR family n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Q38YX9_LACSS Length = 280 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 70/278 (25%), Positives = 136/278 (48%), Gaps = 5/278 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +R Y ++ K++ADY+ + + L+ Q+ A GVS +++ +FA+ LG+ Sbjct: 5 IDSLLRSYYDNFSEKYKQIADYIFQESQFNQRLTIQEFAANCGVSTATISRFAKILGFDN 64 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F A K+AL E+ + P+ ++I +D + EK+ N+ A+ AT ++ +EE+L Sbjct: 65 FQAFKMAL-----LAKEANTSPLFHEINANDTFTTMAEKIFSSNSNALKATWSLLTEEQL 119 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V ++ A + L G+GASG+VAQ+ K ++ +D H L + D Sbjct: 120 QKAVALINRAHLLSLFGLGASGIVAQDGYHKFLRTSIPTVFNQDYHLQLMQATKLTNQDC 179 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + IS++G ++ A + ++ IT F ++L + L +I+EE + ++ Sbjct: 180 AIIISHSGQNKDALELARILKERQVPLIVITSFGNSSLAKLGDITLLSISEETNYRAEAL 239 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A AQ L D LF+ + + + + + A + + Sbjct: 240 HALIAQISLIDSLFMMVAVNNGQETEQSFKEIRAEIDR 277 >UniRef50_C2C2H3 Bifunctional RpiR family transcriptional regulator/sugar isomerase n=1 Tax=Listeria grayi DSM 20601 RepID=C2C2H3_LISGR Length = 282 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 77/281 (27%), Positives = 125/281 (44%), Gaps = 6/281 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L RI ++ L +S+KK+A+ +L P A S LA A S +++V+F + LG K Sbjct: 5 SILNRIETLFKDLPKSEKKVAEMVLQDPAFASASSIHSLAKRADTSAAAIVRFCKSLGLK 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 FP K L L+ SP + D+ + +KL+ + T SE K Sbjct: 65 SFPDFKRQLYSELS----SPVASGYYDFEEDESFDGISQKLLANYFQTLNDTAGQISEAK 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + L A I G+GAS LVAQ+ A K ++ G +D H L A Sbjct: 121 IRTVSEQLEKADTIYTYGVGASWLVAQDIAQKWLRAGKQVVISQDEHVLAMAFAARKSG- 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSA 240 + A+S +G + A++ + V+ +T F P+ L+ +A L T A E S Sbjct: 180 VFFAVSNSGETTSVIELAEQAKQNNLTVIGLTRFGPSKLKAKADFLLETSRAPEAKFRST 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + S+ AQ + D+L+ + + + E+IR S + Sbjct: 240 ATSSKQAQFFIIDVLYYHYVSRHYDQMIEQIRESRQATDRF 280 >UniRef50_C8NHI8 Probable transcriptional regulator YbbH n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NHI8_9LACT Length = 281 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 63/281 (22%), Positives = 137/281 (48%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L +I+ ++D+ +A+++ + ++++L + S ++ V+F++K+GY Sbjct: 1 MSVLYKIKSSMSAFTETDRSIAEFVFVNRQVVLESNAKELGDMTKTSAAAWVRFSKKMGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG PA K+AL++ +Q + I + D L + +K T + T ++ Sbjct: 61 KGLPAFKVALAKE--TQSYTNEDDIETFLNPQDSLMGLLQKTENMLTQNIRETFSLLDYH 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + + + A+ + L G+G S +V +F K+ +I N RD+H L+ + + Sbjct: 119 ALEKAIEFIHEAKTVFLLGVGGSSIVCLDFYHKMTRIHQNVMYDRDLHTLMPRIAQLDKN 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT-PNALQQRASHCLYTIAEEQATNS 239 D++L ISY G +N A +G +++ +T + + L + L+ EE+ Sbjct: 179 DVVLVISYNGETESVNSIAKVAKTMGARIVGVTKYNLKSTLSTLSDIRLFVPVEEKEIRL 238 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 SI++ ++ +TDLL+ + + D + + + + +K+ Sbjct: 239 GSITSRNSLLTITDLLYYGIAKTDFNVTKDLLVRTRQFIKE 279 >UniRef50_Q9CKN4 Putative uncharacterized protein n=1 Tax=Pasteurella multocida RepID=Q9CKN4_PASMU Length = 286 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 110/283 (38%), Positives = 168/283 (59%), Gaps = 3/283 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L++++ Y L+ +++++AD++L P + SS+ LAN+ VSQS+++KF+QKLG Sbjct: 1 MGFLIKLKHTYPSLSPNEQRIADFILKHPHEVKSSSSKALANQIAVSQSAIIKFSQKLGA 60 Query: 61 KGFPALKLALSEAL--ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 F KLA+SEAL P V +H+ I D L + EKL E A+ +L++N+ Sbjct: 61 DKFSDFKLAISEALIRQETQSEPRVHLHDSITDKDDLSEIAEKLFVEKQQALKESLSLNA 120 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 + V L A+RI L GIG S LVA++F +KL KIG D HA LA Q+ + Sbjct: 121 IPYVARVVEQLMQAKRIQLMGIGNSALVAKDFFYKLTKIGLPVVTETDTHASLAMSQSLT 180 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P D+L IS++G RE+ LAA+ K++A+T T N L + A + LY++A+E Sbjct: 181 PQDILFLISFSGRHREILLAAENAKARQIKIIALTALTTNPLHELADYLLYSVADESTFR 240 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+SI++ AQ +TDLLF+ ++QQ E A + I S AL+ +L Sbjct: 241 SSSIASRTAQHAITDLLFMGILQQ-KEHANDLILESRALIGQL 282 >UniRef50_D0GPL3 Transcriptional regulator, RpiR family n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GPL3_9FUSO Length = 285 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 61/279 (21%), Positives = 125/279 (44%), Gaps = 4/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N I+ Y L++ +K +ADY+L + + +L+ LA GV S++ F +KLG+K Sbjct: 5 NMKFTIKTIYNDLSKKEKLIADYILKNINKSTNLTIADLAENIGVVNSTIFSFTKKLGFK 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF + ++L + ++ +H +I +D + + EK+ N ++ T + ++ Sbjct: 65 GFREFR----DSLLRDQFNSNINVHEKISKNDSITSIIEKVFNSNIKSLEDTKKIAEKKS 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + +L + G+G S ++A + K ++ D H L + +D Sbjct: 121 FSTALKILTQVDIVHFFGVGGSSVIAHDAYHKFLRSPLKCRFDSDFHLQLMQASLLTKND 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 IS++G+ +E AD K++ +T + + L ++A + AEE S + Sbjct: 181 CAFIISHSGMTKESIEIADIAKERKAKIIVLTSYPLSILAKKADITFISTAEEIEYRSEA 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +S+ AQ + D +FI ++ + + + K Sbjct: 241 LSSRIAQLSILDTIFILVMLNNPTKTQISLNKIRTTIAK 279 >UniRef50_C3JIB3 RpiR-family transcriptional regulator n=2 Tax=Rhodococcus erythropolis RepID=C3JIB3_RHOER Length = 291 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 79/277 (28%), Positives = 136/277 (49%), Gaps = 2/277 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L RIR L+ ++ ++A+ + P A L+ LA A S ++VV+ A++LG++ Sbjct: 12 DLLARIRASLSSLSPAELRIAEIIEADPSLASTLTVNDLAERASTSTATVVRTAKRLGFE 71 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L+LAL+ A++ ++P+ I D V KL + + + T + Sbjct: 72 GYPQLRLALA-AISGSGTENTIPLGVDIVAADSAGEVMAKLAEFESEQLKGTAQLTDPAA 130 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L E V+ +RSARR+ + GIGASG+VAQ+ KL +I N D A + + PDD Sbjct: 131 LEEVVSRIRSARRVEVYGIGASGIVAQDLTLKLSRIDVNCRVHLDRDAAMVSASLLGPDD 190 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS++G ++ R G AITG + L ++ H L T E SA+ Sbjct: 191 IAVGISHSGETSDVVEPLALARRTGASTAAITGGARSTLAVQSHHVLLTAGREFGFRSAA 250 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +++ Q ++ D +F + A ++ S + Sbjct: 251 MASRTGQLLVVDTIFAMVAHSLP-SALSALQRSHDAI 286 >UniRef50_Q9K6Z8 Transcriptional regulator (Hex regulon repressor) n=2 Tax=Bacillus RepID=Q9K6Z8_BACHD Length = 284 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 68/278 (24%), Positives = 137/278 (49%), Gaps = 2/278 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +I Q ++ K+A+Y+L P+ ++++QLA +A SQSS+V+F ++LG + Sbjct: 6 LLAKIEQELASFPAAETKVANYVLKHPELVPTMTTKQLAEQANASQSSIVRFCKRLGLES 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 FP LKLAL++ L + + + + DD ++ +K+ N A+ +E+ Sbjct: 66 FPKLKLALAKELTRKEAYINSA--SLLETDDSPPILFQKVSSLNQMALDMATKAMNEQAF 123 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 E V + A++I G+G S + +K M++GF++ A D H ++ + D+ Sbjct: 124 TEAVEQMVKAKKIAFFGVGGSFTSCIDGQYKFMRLGFHSLASGDYHQMIPFITMMDEQDV 183 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ +S +G +E+ AD K++ IT + +AL ++A+ L E SI Sbjct: 184 VICMSTSGNTKEVLDIADYAKERNVKLIGITASSRSALTRKAAVSLLIPDIEVQQRIGSI 243 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ +Q + D L++++ + + S ++ Sbjct: 244 ASRTSQLNVIDALYVSVFHRIGSDLLDAFDASRKKTEE 281 >UniRef50_A5EB66 Transcriptional regulator, RpiR family n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EB66_BRASB Length = 270 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 69/271 (25%), Positives = 127/271 (46%), Gaps = 4/271 (1%) Query: 10 RYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLA 69 L +++A+ + QP+ H S ++A VS+ ++V F +++G +GF LK+ Sbjct: 1 MLPELPPKARQIAELIAAQPEPFVHKSITEVAEACDVSEGTIVSFCRRVGVRGFQELKIM 60 Query: 70 LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTML 129 L+ L P I + D V + + + A++ T + S E L E +L Sbjct: 61 LARDLIE----PVRLIQEDLHRGDDPATVTDHIFAAHAASLQETRRLLSMEALAEATRLL 116 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYT 189 R A+RI + GIG+S +AQ+ +++L+++G A A+ D H + + P + +S++ Sbjct: 117 REAQRIEIYGIGSSAPIAQDLSYRLLQLGLAANAIVDSHVQAVSAGMTGPGVATVTVSHS 176 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQG 249 G E LA G + + IT + L LYT+A E ++S+ AQ Sbjct: 177 GSTVETVLATRLAQAAGARTIGITRLGKSPLAAHCEVLLYTVANETRYRPEAMSSRVAQL 236 Query: 250 MLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + D L D E + R++H+ ++ + Sbjct: 237 AIIDTLVSCCALTDTERSVGRLQHAARILSE 267 >UniRef50_Q13K65 Transcriptional regulator, RpiR family n=7 Tax=Burkholderia RepID=Q13K65_BURXL Length = 287 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 65/276 (23%), Positives = 117/276 (42%), Gaps = 6/276 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + IR L +++K+AD +L D A S +LA A VS+ SV +F + +G Sbjct: 5 NLIPHIRSALANLRPAERKVADMVLSDVDFAMRASITELAQRAEVSEPSVTRFCRAIGAH 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G K+ L++++A S + DD ++ + +K+ + + Sbjct: 65 GLRDFKMQLAQSVAGGVPYAS----TAVARDDDVQTLMDKVGEAAIGGITHARGALDPAV 120 Query: 122 LHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + L SARR+ G+G+ SGLVAQ+ A + +++ + A D H P Sbjct: 121 VESAIAALSSARRVFFFGVGSGSGLVAQDAALRFLRLDIASTAFTDGHLQRLYAGLMEPG 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ AIS++G E+N + G +A+T + L L + Sbjct: 181 DVAFAISHSGRSVEVNESIQIAKERGATTIALTNVG-SRLAWLVDIPLLLRVPSPIDPNT 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + + D L I + + E++RH++A Sbjct: 240 PGVSRLVHLCIMDALAIGVALKAGPKTLEKMRHAKA 275 >UniRef50_A8SDH7 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SDH7_9FIRM Length = 281 Score = 253 bits (648), Expect = 4e-66, Method: Composition-based stats. Identities = 66/277 (23%), Positives = 122/277 (44%), Gaps = 4/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N ++Q L +S + +A+YL+ A++LS LA E V++++V +F + LG++ Sbjct: 4 NFWELLQQHQGDLTKSGRTVAEYLVQHAAEAQYLSISSLARECQVAEATVFRFCRALGFE 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ +++AL++A A+ + D + E A+ T N S + Sbjct: 64 GYHEMRIALAQANATGVLVNQ----QEPAPDADTATLCEHASALFMTAINGTQNALSPQA 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V +L SAR++ G G S A+ + I AV D H + + D Sbjct: 120 VDQAVALLHSARQVFCMGQGGSMAAAKEICARFACITNKFRAVADSHMQVMAASLMTEQD 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++L +SY+G R+L G K++ IT + + + A L A+E +S S Sbjct: 180 VVLFVSYSGATRDLMETLRTAKANGAKIILITHYEDSPGAKLADIVLLCGAQESPLDSGS 239 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 I A + ++L + I D + E + + Sbjct: 240 IPIKVAVLYVAEVLVLRYILDDKPGSTEAQERTTEAL 276 >UniRef50_A9MIE1 HTH-type transcriptional regulator murR n=48 Tax=Enterobacteriaceae RepID=MURR_SALAR Length = 287 Score = 253 bits (648), Expect = 4e-66, Method: Composition-based stats. Identities = 95/284 (33%), Positives = 157/284 (55%), Gaps = 3/284 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L ++R ++++K+A +LL + +SS+ +A + +SQSS+VKFAQKLG Sbjct: 1 MLYLAKMRNAEGEFTENEQKIATFLLAHVGELKTVSSRNMAKQLEISQSSIVKFAQKLGA 60 Query: 61 KGFPALKLALSEA---LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 GF L++AL E + +V +H+ I +D L ++ KL +E A+ T N+ Sbjct: 61 NGFTELRMALIEEHSVSREKKRDKAVHLHSSITSEDSLEMMARKLNREKIVALEETYNLM 120 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 E+L + + ++ A I +TG+G S LV ++ ++KLMKIGF A D H QA Sbjct: 121 DYERLEQVINLISKAPLIQITGVGGSALVGRDLSFKLMKIGFRVACEVDTHVQATIAQAL 180 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 D+ +AISY+G ++E+ L A+ + G V+AIT + L++ A + L T++ E Sbjct: 181 RQGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLADSPLRRLADYTLDTVSGETEW 240 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+S+S AQ +TDLLF+ ++Q + + I S L+ L Sbjct: 241 RSSSMSTRTAQNSVTDLLFVGMVQLNDVESLRMIERSSELITLL 284 >UniRef50_A9NEV7 Transcriptional regulator, RpiR family n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NEV7_ACHLI Length = 281 Score = 253 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 66/281 (23%), Positives = 134/281 (47%), Gaps = 2/281 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ +L + + + L+ +++ + DYL+ + S +++A A S +SVV+ +KLGY Sbjct: 1 MSVMLNMLKNKEALSMAERIVLDYLIENKTLLKDFSVEKIAEAAYTSPASVVRMCKKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF K+ A + + + I D G+K I+ N A+ T+N+ E+ Sbjct: 61 NGFKDFKIDFILANSKVEIPETSEYTDVILIKDQNN--GKKAIENNIRALEETINLYDEK 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + +++ +AR+I++ G G+S LV ++ KL +I A + H + Sbjct: 119 TYTKAASLIMNARKILIFGKGSSFLVCKDLEMKLRRINKFCVAQGESHDQFVDASFINNK 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ IS +G +E+ +A +++IT + L + LYT A E SA Sbjct: 179 DVVIFISNSGKTKEIISSALLAKENKTPIISITRIGSSILADISDVVLYTSALESEFRSA 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++++ +Q + D L+ D++ + + + + +KK Sbjct: 239 AMTSRISQMSVVDALYAKCAYTDIDRSIQALETTYRTIKKF 279 >UniRef50_C6JFM8 Transcriptional regulator n=2 Tax=Clostridiales RepID=C6JFM8_9FIRM Length = 285 Score = 253 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 71/282 (25%), Positives = 124/282 (43%), Gaps = 1/282 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L I ++Y L +S KKLADY+ ++LS LA VS++++ +F + LG Sbjct: 4 SILDSITEQYHSLTKSGKKLADYVFSHTTETQYLSITSLAENCKVSEATITRFCRGLGLS 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ A KLAL++A + S + +D + + K+ N ++ + + EE+ Sbjct: 64 GYNAFKLALAQADRTTDLGDSSNSAEPVSSEDSISTICAKVHAANLLSLNESYALYDEEE 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + +++L S+RRI G G S ++A + N + D H + + + D Sbjct: 124 MSKAISILSSSRRIYCFGQGGSMIMAMEAWARFSTASPNFVHICDSHMQASAIAMADSKD 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L SY+G R++ V+ IT F +A + AS L E S S Sbjct: 184 AILFFSYSGSTRDMCDTLQIASSRHVPVILITHFPKSAGAEFASVVLQCGYNESPLQSGS 243 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV-KKLV 282 ++A Q L D LF Q + + + KL+ Sbjct: 244 VAAKVGQLFLIDCLFYGYCSQKPDTCSAARSATAHAIANKLL 285 >UniRef50_B7GUA9 Transcriptional regulator, RpiR family n=7 Tax=Bifidobacterium RepID=B7GUA9_BIFLI Length = 289 Score = 253 bits (647), Expect = 5e-66, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 108/278 (38%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 RI Y L +++ +A Y+ + A L+ Q+A+ A VSQ +V++FA+KLG+ Sbjct: 6 GIRERIDHVYPSLRPAERAVAQYIRDHIEEAADLTVGQMADIAHVSQPTVIRFARKLGFG 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ L+ L A + + + D + K A + + + Sbjct: 66 GYRELRYVLRHPAAEHKVTFNPLDGFDLNPWDGEDEIPSKAADGAKALIDELHSALDPKA 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V +L + I + G+ S A + KL +G D + + Sbjct: 126 YRKAVALLAESEFIDIFGVENSLTPAMDLFTKLGYLGLTCRLNTDAYLQQIGAGHLTHGA 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + +A S++G + A G K +AIT L A L T + + Sbjct: 186 VAVAFSHSGSSADTVKALRLAKSHGAKTIAITNAIGAPLASWADVTLLTGRDSHTIYGNA 245 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 I +C A L D+L++ +I D + S +++ Sbjct: 246 IFSCVADTALVDMLYMGVILSDYGRFSTALDESGRMIR 283 >UniRef50_C4L7F8 Transcriptional regulator, RpiR family n=2 Tax=Gammaproteobacteria RepID=C4L7F8_TOLAT Length = 292 Score = 252 bits (646), Expect = 7e-66, Method: Composition-based stats. Identities = 75/277 (27%), Positives = 140/277 (50%), Gaps = 4/277 (1%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 +IR GL+ +++++A++LL + + S + +A + VS+ +VK ++KLG+ GF Sbjct: 13 AKIRMALPGLSNTERQIAEWLLAKGNVESKTSIKSVAEQLEVSEPLIVKLSKKLGFAGFR 72 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 L+ AL E L+ S + +I D + V K+ + AM +V + Sbjct: 73 ELRQALVEYLS----SLPIDSEQEIEPTDSVESVLNKVFANSIQAMKEARSVADPILIAN 128 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 ++ +A+ +++ G+G S V Q+F KL++IG + A D H +L +D+++ Sbjct: 129 AAQLIFNAKNVVIFGVGGSAAVCQDFEHKLLRIGILSRAYSDFHMMLMVSSQLDENDVIV 188 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 IS +G REL A + + +V+ IT +AL Q A + +++ A+ + A Sbjct: 189 VISQSGDTRELLKAVENAKQRHSRVICITNNDTSALAQLADYAIFSPAKGGILLGQNAVA 248 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 Q L D+LFIA++ QD + E++ +V+ L Sbjct: 249 RIVQLNLLDVLFIAILLQDHDKNREKLTRGSRVVRHL 285 >UniRef50_C2D9G3 RpiR family transcriptional regulator n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9G3_9ACTN Length = 285 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 58/280 (20%), Positives = 131/280 (46%), Gaps = 5/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + +I+ A+ ++ +A ++L +++ +LA++ GV+ S++ KFAQK+GYK Sbjct: 5 SVTAKIKSLLPSCAEKEQAIAQFILQHVRETSYMTIHELADKLGVADSTIFKFAQKMGYK 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF + L ++ P V +H I D L + + + +++ TL + +E+ Sbjct: 65 GFRDFR----NDLLTEAYDPEVSVHEHITTRDSLATIAATIFHSSVTSLHNTLALLNEDN 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L ++++ +A + G G S +VA + K ++ + D H + D Sbjct: 121 LKRALSLINNAHTLTFFGCGGSNIVAADAYHKFLRSPLHCQNAIDEHIQIMQASLLGAQD 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS++G+ R A+ + ++ IT + + + A + +EE S S Sbjct: 181 VAIIISHSGLSRTTLQIAEILRENRVPIIFITSYLNTPITRFADVVFISASEETGYRSES 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAP-ERIRHSEALVKK 280 +++ AQ ++ D LF A++ + + + + + + + + Sbjct: 241 LASRVAQLVILDTLFCAVMFKSDDKNVAQTLHNIRSAINR 280 >UniRef50_Q9WYG1 Uncharacterized HTH-type transcriptional regulator TM_0326 n=7 Tax=Thermotogaceae RepID=Y326_THEMA Length = 280 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 81/282 (28%), Positives = 143/282 (50%), Gaps = 5/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGV-SQSSVVKFAQKLG 59 M+ + RI+++Y ++KK+AD +L P S L+ +AGV S++SVVKF +KLG Sbjct: 1 MDVIQRIKEKYDEFTNAEKKIADTILSDPKGIIESSISDLSEKAGVKSEASVVKFYKKLG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 F K+ L+++++ +P ++ + +D + + EK+ K A+ TLN Sbjct: 61 LNSFQQFKVLLAQSIS---RAPLEIVYEDVSSEDDTKTITEKIFKATVRAILDTLNWLDI 117 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + + V + ++A+RII G AS VA + K +IG N D H + A + +SP Sbjct: 118 DSIERTVDLFKNAQRIIFIGFAASAAVAFDAFHKFTRIGKNCLFSNDEHIIAAILATASP 177 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DLL+AIS+TG + A + + V+ ITG + L + + L T +E + Sbjct: 178 SDLLVAISHTGETISVVNFAKKAKEMKMPVVTITGNRKSTLAKYSDVVLATNTKETKIRT 237 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++++ Q ++ D ++ L +D A E + S V +L Sbjct: 238 DAMTSRIVQLVILDTIYTLLAARDP-RAIENLNKSRLAVSEL 278 >UniRef50_C0CU66 Putative uncharacterized protein n=2 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CU66_9CLOT Length = 285 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 67/279 (24%), Positives = 118/279 (42%), Gaps = 1/279 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L+ IR Y L + +KK+ADY+L P ++ +L+N GV ++V +F + + Sbjct: 5 NLLISIRSCYDRLTRLEKKVADYVLQHPQEVVKMTINELSNSCGVGDTTVFRFCRSMNVG 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ KLAL+ + S N + D L + +++ T A+ TL+ + Sbjct: 65 GYQDFKLALALSSNVNDMLDSKGEFNLAQSHD-LHELAQQVSGVFTDAVNETLSSLDYDA 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V + +AR + L G G SG+ A ++M+I N D+H L + D Sbjct: 124 ISRTVEAILNARSVHLFGFGNSGVSALMMQNRMMRILPNIFYTSDVHMQLTSAATMQEDS 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + +G+ ++ A G + IT F A L + A E S Sbjct: 184 VAIIFCNSGITKDSIRIAQMTHEAGAFTVFITKFMQTPAAPYADVLLCSGATEGPIQGGS 243 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 IS +Q + LL+ L ++ A E + + + Sbjct: 244 ISGVASQMYIVMLLYSELFRRMETRAQENKIKAAHAIAE 282 >UniRef50_Q7MD38 Transcriptional regulator n=31 Tax=Gammaproteobacteria RepID=Q7MD38_VIBVY Length = 278 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 59/281 (20%), Positives = 121/281 (43%), Gaps = 10/281 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L+R+R + ++ + +ADY+L + + LA S+++VV+ + +GYK Sbjct: 6 NLLVRLRSNMEPFSKKLRVVADYILENAHDVQFQTITDLARNTQTSEATVVRLCRDMGYK 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ ++AL+ L+ I + + + ++ T + + Sbjct: 66 GYSDFRMALAVDLSQTESRQQNHIEGD---------ICDVSAQSAVDSLQDTAKLIDRKS 116 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V + A I G+GAS +V + A++L++IG A D H + SS D Sbjct: 117 LARIVERVHQAEFIGCIGVGASSIVGRYLAYRLIRIGKKAIMFEDTHLAAMSASRSSQGD 176 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L A+S +G +E+ AA + V+++T + L ++ L E + Sbjct: 177 LWFAVSSSGSTKEVIHAAGLAYKRDIPVVSLTNINHSPLSSLSTEMLVAARPEGPLTGGA 236 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 ++ +L D+L +L++ + ++ + +V L+ Sbjct: 237 FASKVGALLLVDVLVNSLLES-YPEYKDSVQETAEVVIPLM 276 >UniRef50_D2PUN7 Transcriptional regulator, RpiR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PUN7_9ACTO Length = 294 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 64/261 (24%), Positives = 113/261 (43%), Gaps = 1/261 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RIR L +++++A+ +L P + QLA + S ++V +F + LG G Sbjct: 4 IETRIRGLVPTLTPAEQRVAEQVLADPLGTHRGTIGQLAERSRTSLTTVTRFCRALGMAG 63 Query: 63 FPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + L+ AL+ ++ I DDP++ V L+ + A+ T + Sbjct: 64 YQELRFALATEAGEASSRDWTLGAAADIGPDDPMQSVLANLVATDVRALQETASQLDLAV 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V + +ARR+ L + S V + +L ++G D+H LA+ P+D Sbjct: 124 AEQLVDAITTARRVDLYAVSGSAAVTNDLQRRLHQLGITCHLWIDVHDALASATLLGPED 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS++G E+ G A+T F +A+ A L T A E S S Sbjct: 184 VAIGISHSGETIEVIEPLTAARDAGAVTAAVTNFPRSAITSVAGLLLTTSAREATYRSGS 243 Query: 242 ISACHAQGMLTDLLFIALIQQ 262 +S H Q ++ D L + Q+ Sbjct: 244 LSGRHTQLLVIDCLVTGVAQR 264 >UniRef50_A0JVW9 Transcriptional regulator, RpiR family n=2 Tax=Actinomycetales RepID=A0JVW9_ARTS2 Length = 309 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 62/283 (21%), Positives = 124/283 (43%), Gaps = 8/283 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L RI R L S +++A+ +L P+ A+ ++ +LA AGV +S+V +F ++LG Sbjct: 9 GLLHRISGRLPYLPPSLRQVAEAVLKSPEQAQTMTISELAVAAGVGESTVSRFVKELGID 68 Query: 62 GFPALKLALSEAL------ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLN 115 G+ ++ L L+EA S + S ++ + D + K+ + + ++ T Sbjct: 69 GYKSMLLGLAEATFISKAATSARTADSEVVYEGVNRGDTAAEIAGKVERSSVQSLRRTGQ 128 Query: 116 VNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQ 175 E + V ++ ++ +I + +G+S + A+ + + G RD + Sbjct: 129 RQDVEAIQRAVDLIDASNTVIFSCMGSSSIAAEEAVMRFTRAGKKCMLYRDTTIQVMLAA 188 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA--E 233 P DLL+ IS +G + A + G +AITG + L+ A LYT Sbjct: 189 IIEPGDLLIGISDSGRSTPIIDAMHLARQRGAATIAITGAEGSPLRNYADVVLYTATVPS 248 Query: 234 EQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 S+++ Q ++ D+L+ + + E ++ + Sbjct: 249 GGELYGESVTSKWGQLLVIDILYATYASRHYDATVEHLKQTYQ 291 >UniRef50_C2JLW7 Bifunctional RpiR family transcriptional regulator/sugar isomerase n=22 Tax=Enterococcus faecalis RepID=C2JLW7_ENTFA Length = 290 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 70/281 (24%), Positives = 139/281 (49%), Gaps = 5/281 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N +L I+ R Q L +S++K+A+Y+L +T +++Q+LA +AG S +++++F + Sbjct: 12 NIVLSIQDRLQQLPKSERKIAEYILKNTETVISMNAQELAKQAGSSPAAIIRFCHSMDVN 71 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LKL LS L + ++ ++ + + +KL + + + Sbjct: 72 GFTELKLLLSANLGQMKQQ----MYTEVTKGESTADIKQKLQARFVHVVERSGQTLEDVA 127 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 ++E V +L I + G+GAS LVAQ+ K ++G D H + + ++ Sbjct: 128 VNEAVDLLEKTEVIFVYGLGASSLVAQDIYQKFTRLGRTVFTTLDHHLFASMLGSTEKPS 187 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ-ATNSA 240 + + IS +G +E + AD + G +++IT + + +++ L T + E SA Sbjct: 188 VFIVISNSGTNKEASTLADLAKQQGIPIVSITQDEKSVIGEKSDIVLQTSSGEDVPLRSA 247 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + AQ + D+LF A ++ + E+I+ S V++L Sbjct: 248 ATVSLVAQLYVVDVLFFAYAAKNYKETLEKIQISRKNVERL 288 >UniRef50_Q03Q61 Transcriptional regulator n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03Q61_LACBA Length = 286 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 123/279 (44%), Gaps = 1/279 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + +IR Y L++++KK+A L P ++ ++LA+ GVS +++ +F +++ Y Sbjct: 4 STIGKIRGTYDQLSRTEKKVAQMALNTPAVVSEMTIKELASATGVSTATISRFVKRMDYA 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + +AL+ LA + ++ D L + K +++ AT SE+ Sbjct: 64 NYREFTMALAH-LAIEDGGEHQSSFPELAEGDSLATIANKTFHYTISSLEATNEALSEKD 122 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V L +A ++ G+G S + A + K ++ + D L S D Sbjct: 123 LARAVLKLINAEKVTFFGLGGSSIAALDGYHKFLRTALSVTYYPDFDIQLMQAARLSDQD 182 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + IS++G E +E+ R ++AIT ++ + L Q A ++ +E S Sbjct: 183 CAVVISHSGRNSETLQVVEELQRNDVSIIAITSYSGSPLAQAADVTFLSLTDEVNYRSEG 242 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + +Q + D LF+ + + + ++++ Sbjct: 243 MYSLISQLAILDTLFMMTVLRVSSRTGNVMTKVHDVIEQ 281 >UniRef50_A9BH25 Transcriptional regulator, RpiR family n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BH25_PETMO Length = 283 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 58/277 (20%), Positives = 127/277 (45%), Gaps = 4/277 (1%) Query: 7 IRQRYQGLAQSDKKLADYLLL-QPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 + R +S+KK+A+Y+L + + ++ +LA + G S++++ +F +K G++ F Sbjct: 8 LNSRMPTFTKSEKKVAEYILNSKKEDITRITITELATKCGTSEATIARFVKKAGFETFQD 67 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 KL L+ I I +D + + K+ + ++ +T ++ + Sbjct: 68 FKLTLALDNNEDIFEEEKDI--TIFKNDSPQEILRKVKLGSLKSIESTTSILDINNFLQA 125 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 +RSA+RI + G+G+S VA+ +KL ++GF + A+ D H + + DL + Sbjct: 126 ANFIRSAKRIEIYGVGSSSAVAKILQYKLTRLGFPSYALEDPHMQAISAATLNFGDLAIG 185 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 IS +G ++ + + + G +++T + + + + L + E +++ + Sbjct: 186 ISQSGSTKDTVDSLNVAKKHGATTISLTEHANSPITKYSDVVLEIFSGENPVKTSAGRSI 245 Query: 246 HAQGMLTDLLFIALIQQDLELAPER-IRHSEALVKKL 281 Q ++L L + E A + A+V KL Sbjct: 246 LVQIFAVEILSGLLYSIEYEKALTTGKDTARAVVNKL 282 >UniRef50_D1AG49 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AG49_SEBTE Length = 283 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 60/276 (21%), Positives = 125/276 (45%), Gaps = 2/276 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ ++++R+ + ++ A Y++ D LS +LA + S +++++ +K+G Sbjct: 1 MSLIIKLREA-KNFTPNEIGAAKYIISHSDEVIRLSCTELAKKTYTSPATIIRLCKKIGI 59 Query: 61 KGFPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ K+ L+ + S + +N+I D + + +K+ + ++ T + + Sbjct: 60 GGYQEFKVILATEINFFIKNSMEINKNNEIDKKDSISDIIDKISSLSIDSLKETKILTDK 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + + M+ +A + L G GAS VA + +K M+IG A + S+ Sbjct: 120 NVVKSVIDMINNAEILDLYGSGASHFVALDANYKFMRIGKVTATYALYDQQYVQAKNSNE 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 + + SY+G E+ A + K++ IT + N L++ A LY A+E S Sbjct: 180 NHAAIIFSYSGETAEMIEIAKILTENKAKIITITKNSDNTLEKFADKSLYVTAKENLYRS 239 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 A+I + + + D+L+ A E A E + + Sbjct: 240 AAIYSRISMLNVIDILYTAYFNLIYEKALEALGKTR 275 >UniRef50_B7RYI4 Transcriptional regulator, RpiR family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RYI4_9GAMM Length = 278 Score = 250 bits (639), Expect = 4e-65, Method: Composition-based stats. Identities = 72/280 (25%), Positives = 122/280 (43%), Gaps = 5/280 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L + ++S K+A ++ P+ ++ LA +AGVS+ +V +F LGY Sbjct: 1 MTLLTDLADPLSKRSKSAHKIAACVVANPEAILASTTASLAAQAGVSEPTVNRFCTGLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGFP KL+L+ LA + + I DD V K+ + A++ T + Sbjct: 61 KGFPDFKLSLAAELARKQ----PRMTRDIDPDDSAAKVAAKIFESTQASLSNTQDHLDLA 116 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V + +AR I L G+GAS VA + KL++ A D+ D Sbjct: 117 ALQDVVAAMSNARSIALCGLGASASVALDAQHKLLRFPIPIMAHTDIINQRVVAAGLGAD 176 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DLL+ ISYTG + A+ + G +V IT + L L + E Sbjct: 177 DLLICISYTGRTTAMIELAELAVSRGCQVAGITS-PHSPLANTCPLVLGVESGEDTDRYT 235 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +++ AQ ++ D+L L + E + ++ + + + Sbjct: 236 PMTSRIAQLVIIDILATCLALEQGEAFADHLQEVKRNLSQ 275 >UniRef50_C1PED1 Transcriptional regulator, RpiR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PED1_BACCO Length = 289 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 69/279 (24%), Positives = 131/279 (46%), Gaps = 4/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N +L+I+ + L++S+KKL +Y+L + ++ +LA +AGVS ++VV+F + +G Sbjct: 6 NIILQIKSKLTSLSKSEKKLGEYILSHAVETVNDNTSELAKKAGVSPATVVRFCRSIGLS 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ L A I+ I ++ + ++ +KL ++ T N+ Sbjct: 66 GFSQLKIRL---YADASGGLDREIYTDITPNEDITMIADKLALRFNQSITQTANLLETSC 122 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + M+ + I + GIGAS + A++F K +IG D H L +++ +S D Sbjct: 123 IEKITAMVDKSPAIYVYGIGASHVAAEDFTHKFSRIGKPVVHTLDHHLLGSSLINASKDC 182 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ-ATNSA 240 + +AIS +G E + G + IT + L L E SA Sbjct: 183 MFVAISNSGETNEAIKLTQIAKQNGLFTVGITQKRDSTLASIVDAPLIHHGGEAVLLRSA 242 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + ++ AQ D+L+ A + + R+++S+ ++ Sbjct: 243 ATTSLAAQLFTIDVLYFAYVAKHYHEIMGRLKNSKINIQ 281 >UniRef50_Q03YQ8 Transcriptional regulator n=4 Tax=Leuconostocaceae RepID=Q03YQ8_LEUMM Length = 284 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 68/279 (24%), Positives = 136/279 (48%), Gaps = 2/279 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + ++R + + +++KL D+++ AR + Q+++ +GVS +++ +F +K+G + Sbjct: 4 NIIAQLRAQRKQYNTTEQKLIDFIINHVSEAREANIQEMSELSGVSTATISRFVKKIGLE 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F ++L+ A+ + SV + +I D V +K+ A+ AT++ + + Sbjct: 64 SFREFSVSLAS--AATQMAASVDLFGEIADTDDTIAVAQKVFGGAENALAATVSNLTATQ 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L E L SARR+ GIG S +VA N K ++ + A D L + +D Sbjct: 122 LDEATLALISARRVGFFGIGGSSIVAFNAYHKFLRTPIDVIAHPDYDVQLMQAVKLNSND 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + IS++G ++ L A ++ K++A+T F + L + A L ++AEE S S Sbjct: 182 TAVVISHSGRNKDTLLIAKKLHEQHVKIIAVTSFKDSPLAKLADLVLLSLAEEVNFRSES 241 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +S+ AQ + D LF + + + ++++ Sbjct: 242 MSSLIAQLTIIDTLFTLVGSHLSQDTQSVVDTMRDVIEE 280 >UniRef50_Q03HR4 Transcriptional regulator, RpiR family n=2 Tax=Pediococcus RepID=Q03HR4_PEDPA Length = 270 Score = 247 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 68/278 (24%), Positives = 136/278 (48%), Gaps = 14/278 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + + Q+Y L++ ++K+A ++ P + ++ L+ +A VS ++V +F +K+GY Sbjct: 1 MNIIDVVEQKYPSLSRQERKIALKVVQHPADVKKMNINTLSKKAEVSTATVTRFVKKMGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F KL L+EA ++ I + + +++ + T +++ Sbjct: 61 PDFSQFKLGLAEATSN------------ITENVDNAPLPDQVTDFYNQMITGTWKRINQK 108 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L++ ++++A R+ + G+G+SG AQ + +LM++G NA A D H + + D Sbjct: 109 TLNQVAMLIKNAPRVFIFGLGSSGYNAQELSQRLMRMGINAFAPSDSHTMYISSSIMQKD 168 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DLL+ +S +G E+N A + KV++IT F + L + + + L E N+ Sbjct: 169 DLLIVLSVSGKSNEVNEAVAVAKQHQLKVVSITAFDDSPLAEMSDYQLSVQYSEFVDNTQ 228 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 I++ + D+L L+Q E R + + A + Sbjct: 229 FINSQLGVVYIIDILSTMLLQN--ETYKARYQQTVAAI 264 >UniRef50_A8RZI5 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RZI5_9CLOT Length = 294 Score = 247 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 59/279 (21%), Positives = 126/279 (45%), Gaps = 2/279 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +L IR + Q + K +A+Y+L + + LA E+ VS+++V +F + +GY+ Sbjct: 14 IVLDIRSKMQDFNPAQKAVANYILNNFYDMEGMPIRDLAVESEVSEATVSRFVKAMGYEN 73 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + A +L ++++ A + S+ + ++ +D + K+ + N A+ TL V + L Sbjct: 74 YRAFQLEVTKSKAER-RKGSLKGYAEVTEEDNAPGICRKIFESNIQALQDTLTVIDYDAL 132 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 ++ ARR+ + G S + A + +L ++G D H P+D+ Sbjct: 133 ERAADLIARARRLCIFAQGRSKVTANSIRLRLHRLGIEGTLYTDPHEQAIASSLMGPEDV 192 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL-YTIAEEQATNSAS 241 + IS G R + ++ G ++ +T + L++ A L +E S Sbjct: 193 AVGISTFGRSRSILVSIRRAAARGSSIIGVTSYQNTPLEKEADILLRTVNNDEADFGSEP 252 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A Q ++ D L++ + ++ A ER + + +++ Sbjct: 253 SCASVTQMVMLDCLYMLVAKRMEGKAEERFKITRDAIQQ 291 >UniRef50_B9CM70 Transcriptional regulator, RpiR family n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CM70_9ACTN Length = 283 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 71/277 (25%), Positives = 129/277 (46%), Gaps = 4/277 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +R+R L+ +++LA++LL P A ++ Q+A G++ S+V KF QKLG++G Sbjct: 6 IRVRVRALESSLSDKERQLAEFLLADPHKASKMTISQIAQTLGMADSTVFKFTQKLGFEG 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F + L+ P V IH I + + E + + + ++ T + SE+ + Sbjct: 66 FRDFRGELAAE----GFDPEVSIHEHITHKSTPKQMAETVFESSIRSLTDTKELFSEQDI 121 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 ++ ++ G+G S +VA + K ++ A D H L S+ DD Sbjct: 122 IHAAKLIEDCYQLTFYGMGGSSVVAADAYHKFLRTPKRVAYDADFHLQLMRASRSNGDDC 181 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L +S++G + A+++ VG + IT + L A CL TIAEE A S S+ Sbjct: 182 ALLVSHSGRCIQTIQIAEKLREVGASTIVITSNPSSPLTALADACLVTIAEETAYRSESL 241 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ +Q L D L+ ++ D A ++ ++ Sbjct: 242 ASRISQLALVDALYTIVMFSDENAASRSLKEVREVIS 278 >UniRef50_D1PSB4 Transcriptional regulator n=3 Tax=Clostridiales RepID=D1PSB4_9FIRM Length = 282 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 71/282 (25%), Positives = 131/282 (46%), Gaps = 5/282 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N +R RY L +S +++ADYL + A++LS LA E GV+++++ +F + LG+ Sbjct: 5 NFWELLRSRYSELTRSGRRVADYLTRHAEEAQYLSISSLAAECGVAEATIFRFCRSLGFD 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ +K++L++A A P+ +++ + A+ T +V + E Sbjct: 65 GYNEMKISLAQANA----IPTAAGADKLEPGADTATLCTHASAVALEAINGTRSVLNPEA 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + T+L+ AR++ G G S ++A + + + D H P+D Sbjct: 121 IDAAATLLQRARQVFCFGQGGSQILANDIWARFATVSTKFRTAGDSHMQTIAASLMVPED 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++L ISY+G R++ + G KV+ +T + A L A+E + S Sbjct: 181 VVLFISYSGSTRDMMETLRIVKGNGAKVILLTHYADAPGTALADVVLLCGAKESPLDGGS 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLE-LAPERIRHSEALVKKLV 282 I+A A + ++L + + E A R R S+AL KL+ Sbjct: 241 IAAKIAVLFVAEVLVLRFTLDNQELAAIARERTSKALAPKLL 282 >UniRef50_C0R285 Transcriptional regulator n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0R285_BRAHW Length = 285 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 75/281 (26%), Positives = 141/281 (50%), Gaps = 2/281 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L IR +Y+ +++ KK+++Y+L P L++ ++ GVS +SVV+FA+ LG+ Sbjct: 1 MNAYLIIRDKYEDFSKAYKKISNYILSNPKEVIKLTALDISKNCGVSSASVVRFAKDLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG LK++++ + + I+ I DD + + K++ ++ +E Sbjct: 61 KGLDELKISIAS--KNGDDDNKYNINTIISADDNVEELCNKIMLLIKSSNEDFFYQLDKE 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + ++R+AR I + GIGAS L A + KL + FNA D H + + Sbjct: 119 ALEKAFKLIRNARNIYMLGIGASSLSAYDLFHKLKRANFNAFFYEDAHLNAEFFNYLTEE 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++A SY+G E+ ++A+T N L + A + E+ T Sbjct: 179 DVVIAFSYSGRTNEVIYPVKIASSKKASIIAVTRKKTNNLSKMADVLITVPNNEELTRMG 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +I++ ++ +++DLL+ IQ+D E E + ++ L ++L Sbjct: 239 AITSKYSSLIVSDLLYFGAIQKDFENIKENLINTSILTREL 279 >UniRef50_A1JQZ2 RpiR family regulatory protein n=12 Tax=Enterobacteriaceae RepID=A1JQZ2_YERE8 Length = 286 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 103/284 (36%), Positives = 167/284 (58%), Gaps = 3/284 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L I LA++ KK+A +L P++ +SS Q A +AGVSQS++VKF+QK+G Sbjct: 1 MSILNEITWLLPELAENQKKIAKCILDNPESILSISSSQFAEDAGVSQSAIVKFSQKIGM 60 Query: 61 KGFPALKLALSEALASQP---ESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 KGFPALK+A+SE L+ P +HN I +D L ++ +KL E TA++ T Sbjct: 61 KGFPALKIAISEELSRNNLFKSYPHKALHNSISPEDSLMVMAQKLAHEKTASIMETTRKI 120 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 + + V+++ +A+R+ + GI +GL A++ ++KL KIG D+H +A Sbjct: 121 NFSVFQQVVSLINAAQRVQIVGIWGAGLTAKDLSYKLQKIGIMTLVEADLHVQIAAALTL 180 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 +P D+ + +S+TG R+++ +AA G V+AITG + L + A + L +I++E Sbjct: 181 TPKDVQIVLSFTGRRKDMKIAATVAKAQGATVIAITGSKVSPLAKIADYVLESISDENEW 240 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+SIS+ AQ LTDL+F+AL+QQ E+A I ++ + L Sbjct: 241 RSSSISSRTAQNTLTDLIFLALMQQRKEMAKPLILNASMTINNL 284 >UniRef50_D0DKU0 Transcriptional regulator n=1 Tax=Lactobacillus crispatus MV-3A-US RepID=D0DKU0_9LACO Length = 284 Score = 246 bits (630), Expect = 6e-64, Method: Composition-based stats. Identities = 68/281 (24%), Positives = 139/281 (49%), Gaps = 2/281 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN RI + Y L +S + +AD +L P + +++++ N S +SV++F ++L Y Sbjct: 1 MNVRDRILENYTELKKSSRIIADAVLENPKILLNKNAKEIGNYTNTSAASVIRFCKQLNY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG ++ L+++ Q + + + + DD V KL + + Sbjct: 61 KGLKDFQIDLAQSTVKQSQLKPIDM--IVTKDDKADEVMTKLRVSLSQNFEDLSKTIDIK 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V++++ +R + + GIGAS A++ +KL++ G D+H L + S+P Sbjct: 119 DLQKAVSLIKKSRAVYIAGIGASSFSAKDLFYKLIRSGKTVFYNDDVHIALERIYYSTPK 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ SY+G+ +EL LA + + ++A+T + + L + A L E Sbjct: 179 DVMICFSYSGLTQELLLAVKQAKKNKTPIVAVTRKSESPLSKLADINLKLPDHESLMRVG 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +I++ AQ ++++L++ I DL + + + L++KL Sbjct: 239 AINSTFAQMFISNVLYLCSISSDLGEVKQEMEATGKLLEKL 279 >UniRef50_Q2JBJ8 Transcriptional regulator, RpiR family n=1 Tax=Frankia sp. CcI3 RepID=Q2JBJ8_FRASC Length = 299 Score = 246 bits (629), Expect = 7e-64, Method: Composition-based stats. Identities = 71/277 (25%), Positives = 117/277 (42%), Gaps = 4/277 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 + +R L S +K+ +L P HL+ LA+ G S ++VV+F Q LG KGF Sbjct: 24 IAHLRACLPTLTPSGRKIGQLILDDPREIVHLTVTDLADRTGTSVATVVRFCQDLGLKGF 83 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 LK+ L+ P +H + D + EK++ +A+ T Sbjct: 84 ADLKIRLAGE----AIPPERGLHEAVTHADSPATILEKILHSTESALSETTRTVDRAAFT 139 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 V L+ A R++L G G S +AQ+ A++ +G A A D H + P Sbjct: 140 RAVDALQCADRVLLIGAGTSAPLAQDAAYRFRTLGLLAEAPADAHVQHVAARLLPPASAC 199 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 LAIS+TG RE A G +A+T F + L + A L + E ++S Sbjct: 200 LAISHTGQTRETLAGAAAARAAGATTIALTSFFRSPLTRLADVALVAGSSETNYRVEAMS 259 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + D LF+A+ + A + + ++ + Sbjct: 260 SRIIHATVLDALFVAVHLAQPDRAQKAQELTAEVLTE 296 >UniRef50_A0Z4E2 Transcriptional regulator n=3 Tax=Bacteria RepID=A0Z4E2_9GAMM Length = 291 Score = 246 bits (628), Expect = 9e-64, Method: Composition-based stats. Identities = 68/277 (24%), Positives = 117/277 (42%), Gaps = 5/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L +I+ GL++SD K+A +L P+ A H S LA +A VS+ SV +F ++LG Sbjct: 6 NVLTQIQAALPGLSKSDTKIAHVVLADPEAATHASIALLAQQANVSEPSVNRFCKRLGAT 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P K+ L+ +L + I + +D + KL+ A+ + Sbjct: 66 GYPDFKIWLARSLVAGVRY----ISQVVDPEDTVTTYPGKLVDNTVNALLLAREQLPLKT 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V L +A RI G+G S VAQ+ K + D L S D Sbjct: 122 LEVAVEHLDAAGRIYFFGMGTSAAVAQDAEHKFFRFQTPVTTHTDPLMLRMLAAGGSQGD 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS+TG + AA G V+++T + L Q + + A E + Sbjct: 182 VFVFISHTGRTEAIVDAAALASASGATVISLTA-QDSPLAQVSHCVIGLEAPENTEDYLP 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +++ ++ D+L + + E E + + + Sbjct: 241 MTSRIVHLVIIDILVTGVTLKRGEPCIEHLARIKESL 277 >UniRef50_B5HLI6 RpiR-family transcriptional regulator n=3 Tax=Streptomyces RepID=B5HLI6_9ACTO Length = 317 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 81/275 (29%), Positives = 129/275 (46%), Gaps = 1/275 (0%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 ++R + +S ++A+ + P L+ LA G S+++VV+ A+ LGY G+ Sbjct: 37 AKVRTLGPSMTRSMHRVAEAVAADPAGCAALTVTGLAERTGTSEATVVRTARLLGYPGYR 96 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 L+LAL+ A Q + I I DDP+ V KL + + T +L Sbjct: 97 DLRLALAGLAAQQQSGRAPAITTDIAVDDPIADVVAKLAYDEQQTLADTAAGLDTAQLGA 156 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 V SARRI + G+GASGLVAQ+ KL++IG A A D H + D+ + Sbjct: 157 AVAATASARRIDVYGVGASGLVAQDLTQKLLRIGLIAQAHSDPHLAVTNAVQLRSGDVAI 216 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA-EEQATNSASIS 243 AI+++G ++ G +AITG A+ Q A H L T E A++S Sbjct: 217 AITHSGATGDVIEPLRVAFEHGATTVAITGRPDGAVTQYADHVLTTSTARESELRPAAMS 276 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + +Q ++ D LF+ + Q+ E A + S + Sbjct: 277 SRTSQLLVVDCLFVGVAQRTYETAAPALAASYEAL 311 >UniRef50_A8UCF6 Phosphosugar-binding transcriptional regulator, RpiR family protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8UCF6_9LACT Length = 292 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 130/279 (46%), Gaps = 2/279 (0%) Query: 2 NGLLRI-RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 N L ++ R + ++K +AD+ + + + LA++ G+S++++ KF +K+G+ Sbjct: 4 NYLEKLLRPYIKSFNDTEKIIADHFIKLGHDVVNKTLSNLADDTGLSEATIFKFVKKIGF 63 Query: 61 KGFPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 GFP K++++ + + + + + I +D + +KL+ N A+ + E Sbjct: 64 DGFPNFKISVASNFQNIEERKNELTVFSDISKEDSSYAIAQKLVYSNKLALDNLIGSLDE 123 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E++++ + ++ ++ I G GAS ++A + K ++ F + D H L+ P Sbjct: 124 ERINQALNLIYDSQTIHFFGQGASSVIALDSYHKFLRTRFLCNYISDYHMQLSYATKLGP 183 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +D + S++G E A + ++ +TG L + +S +EE A S Sbjct: 184 NDCVFLFSHSGETNETIEVARILRNNQVNIIVLTGNHHTDLVKLSSISFVVDSEESAFQS 243 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++++ + D+L++AL+ D + + + Sbjct: 244 ETLTSRILYLTIIDILYVALMYHDEAKNKDSLEKIRKAL 282 >UniRef50_C1IBM1 Phosphosugar-binding transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IBM1_9CLOT Length = 266 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 131/279 (46%), Gaps = 14/279 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L ++++Y + +K +ADY++ D ++++ LA E G S +++ +FA+K+G Sbjct: 1 MDILCEVQRKYNEFSDKEKDIADYIMQHGDKIKNINITDLAKEIGTSGATITRFAKKIGC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F +K+ L S + I +D + + + T + +E Sbjct: 61 DSFVDMKIKL----------GSNKVELPINDEDG---IFSYTYQYYNEVIERTKMLIDKE 107 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ + V ++ A+ I + G+G+SGL + +L+++GFN + D H ++ S + Sbjct: 108 EIFKVVNEIKKAKNIYIYGVGSSGLTCKEMMQRLLRMGFNVHCISDSHMMIINSSIVSEN 167 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++ IS +G +E+ + + G K+++ITGF + + + + S Sbjct: 168 DLVIGISISGETQEVIHSLRKSKENGAKIVSITGFEGSTVSKYSDIKFIVYNPNFVDRSR 227 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 I+ + L D L ++ +D+ L+ + A++ Sbjct: 228 FINTQFSAMYLLD-LISMVLLKDINLSNKMQTTINAIIN 265 >UniRef50_A6T0F7 Transcriptional regulator, RpiR family n=2 Tax=Oxalobacteraceae RepID=A6T0F7_JANMA Length = 286 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 63/279 (22%), Positives = 120/279 (43%), Gaps = 5/279 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L IR +Y L++S+KK+A +L QP+ A + LA +A VS+ +VV+F + +G+ G Sbjct: 2 LLDSIRTQYDSLSKSEKKVALAVLEQPELAIAENITALAKKAEVSEPTVVRFCRAIGFDG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + A KL L++ LA P + +D + +K+ + + N + Sbjct: 62 WQAFKLKLAQGLALAPGTGDESP----MLEDMAADLVDKVCNRSINTLLDLRNSLDANAI 117 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + +L A I G G SG++A + K + G A D H D+ Sbjct: 118 EQALQVLGRANTIEFYGQGTSGIIAADAQHKFFRSGVPTVAYSDPHIHSIAASLLKKGDV 177 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++AIS G L + G ++ + + L + A+ + I Sbjct: 178 VVAISQRGSSLSLLRSVQLARSSGAAIVVL-APSGTPLAELATVLIPIDLHFHTDPYTPI 236 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 SA A ++ D+L + L + +++ +++ ++K Sbjct: 237 SARLAHLVVIDILAVGLALRLSPERRKKMLNAQKALQKF 275 >UniRef50_A4WDW6 Transcriptional regulator n=10 Tax=Enterobacteriaceae RepID=A4WDW6_ENT38 Length = 274 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 68/281 (24%), Positives = 128/281 (45%), Gaps = 12/281 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LLR+RQ G + + +KL ++L P +L+ +LA E+ S++SV + + LG K Sbjct: 6 NLLLRLRQGVSGYSPTQQKLGSFVLNDPSRVLYLTITELARESDTSEASVTRLCRTLGCK 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ K+AL+ + + H ++ D + + E+ + A+ T + E Sbjct: 66 GYTEFKMALALDVQRE--------HVPLKKGDEIDEIVEE----SILALQDTSRLLDREI 113 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + L +R + + G+ AS ++ +KL+++G A DMH + DD Sbjct: 114 LLKAAQALHQSRSVYIYGVAASAIIGDYLHYKLLRLGKPAQLFSDMHRASMNATTLTSDD 173 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++AIS +G R+L + G VLA++ + L + L E ++ + Sbjct: 174 LVVAISSSGSTRDLLHVVKLARKRGAHVLALSNTPRSPLTSLSDMLLVAAKPEGPLSAGA 233 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 ++A +L +LL +I D + + A + L+ Sbjct: 234 LNAKVGVMLLVELLATTMISLDDRYGDASQQTASATLPLLL 274 >UniRef50_C9L6X6 Transcriptional regulator, RpiR family n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L6X6_RUMHA Length = 297 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 72/281 (25%), Positives = 133/281 (47%), Gaps = 6/281 (2%) Query: 1 MNGLLRIRQRYQ--GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 M R+ + ++++K+A YLL D + H + +LA+E GVS +S+V+F + + Sbjct: 17 MGCRERLIDKRDGEHTKKTERKIAAYLLGNFDKSLHSTLLELADEIGVSDASIVRFCKSI 76 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 GY GF K+ A Q + + DD + +K+ ++A+ T Sbjct: 77 GYTGFQEYKI----NAALQSVPEPRLYNPSLSVDDNPAEICDKIFAIESSALEQTKQELD 132 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 +++ +L ARRI L G G S + A++F KL+KIG A D L + + Sbjct: 133 ISVMNKVADVLLKARRINLVGTGGSAISARDFQHKLLKIGVRAELQEDKDLQLMSASLLT 192 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 +D+L AIS++G + + + K++ +T + N L ++A + LY ++E+ Sbjct: 193 EEDVLFAISHSGSNLHVAETIELAQKRNAKIITLTMKSKNILVEKADYPLYVVSEKTIFE 252 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S S SA AQ + D L + ++ + + E ++ + Sbjct: 253 SESFSARLAQLAMLDCLVALMAFKNFDGSLEAMKATRIATS 293 >UniRef50_A8RDU7 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RDU7_9FIRM Length = 281 Score = 244 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 60/280 (21%), Positives = 130/280 (46%), Gaps = 2/280 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L+++R+ Y L+ S+ ++ Y+L +S+Q+LA ++ S ++V++ ++L Sbjct: 3 MSVLVKLRE-YHTLSNSENEVRMYILRNSKKVISMSTQELAAKSYTSPATVIRLCKRLEL 61 Query: 61 KGFPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 KG+ LK+ L+ + + + + V + D L + +K+ + ++ T + Sbjct: 62 KGYSELKIQLASEIKAFETMNLDVVDQTTFKKGDSLTELIDKVTDISIHSIEETRLLLDY 121 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E L + A I L G+GAS +A + +K M+IG + + + + S Sbjct: 122 EVLLCVARQIMDASIIDLYGVGASNNIAFDAGYKFMRIGKSISCLSLIDRQRIQAINSDS 181 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 + ISY+G E+ A + + ++ITG N L + L+ + E + Sbjct: 182 SHFAIIISYSGETPEIIEIAKILEKNNVPAVSITGSIQNQLVNLVEYNLFVSSRESNFRN 241 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +I + + + DL++I I + + + +R+ + + K Sbjct: 242 GAIVSRTSTLYMLDLIYITCISLNYDDSAKRLGQTLTISK 281 >UniRef50_A8UBX8 Phosphosugar-binding transcriptional regulator, RpiR family protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8UBX8_9LACT Length = 285 Score = 244 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 77/280 (27%), Positives = 133/280 (47%), Gaps = 5/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LL IR++ L QS+KK+A+ +L P +S+ LA EAG S ++V++F + +G K Sbjct: 4 NVLLTIREKKITLPQSEKKIAETILRDPVKVIQMSATDLATEAGSSSAAVIRFCRSIGIK 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LKL LS + ++ I D+ L V +K++ T NV ++ Sbjct: 64 GFTELKLQLSAD----SQGIKDNLYTDILADENLEQVKKKMLINTNHLFKETNNVLDTKQ 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + +L + I L G+GAS +VA + K ++G D H L+ ++ + + Sbjct: 120 IERVSELLHESSIIYLYGLGASHIVASDIQQKFSRMGKIVVCSLDQHLLVTSMAVAGENA 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSA 240 + +S +G ++E+ +G K +A+T T NAL A L T A E S Sbjct: 180 VFFGVSNSGEKKEVLALMIMAKELGLKTVALTNNTENALSLEADIALKTAFAHEAPLRSG 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + Q D+LF ++ +L + S+A +++ Sbjct: 240 ATISLLTQMYAVDILFYDYASKNYDLTVTNLEKSKAAIQR 279 >UniRef50_A2RL41 Transcriptional regulator, RpiR family n=4 Tax=Lactococcus lactis RepID=A2RL41_LACLM Length = 283 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 72/282 (25%), Positives = 138/282 (48%), Gaps = 3/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ LL IRQ Y +KK+ADY+ + S+Q++A+E G S +++V+F++KLGY Sbjct: 1 MDTLLIIRQNYSNFTTVEKKIADYIFEVGEKMLEKSAQEVASEIGSSSAALVRFSRKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK LS + A + ++ + + KL + T S++ Sbjct: 61 DGFSQLKQKLSASYA--VHEDDEDYYKEVNDSETPSSIKNKLKVRVNHMVETTNAALSDD 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ V ++ A I + GIGAS +VAQ+ K +IG ++D H ++++ S Sbjct: 119 EIMAAVALIDEAESIFVFGIGASSMVAQDIFQKFSRIGKQVFFIQDAHLFVSSLSISDRK 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA-TNS 239 + + IS G +E+ A + + ++AIT + L Q + + L++++ E + Sbjct: 179 TIFIGISMKGETKEVIELARVVRGMEIPIIAITSREESTLGQMSDYILHSVSGEDYQMRT 238 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 A+ + AQ + D+LF + + + +++ + +K L Sbjct: 239 AATMSLMAQLYVVDILFYMFVSEHFTESYDKLEKTRDAIKLL 280 >UniRef50_B5FDJ7 Transcriptional regulator, RpiR family protein n=48 Tax=Gammaproteobacteria RepID=B5FDJ7_VIBFM Length = 283 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 107/283 (37%), Positives = 167/283 (59%), Gaps = 2/283 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L +I+ + L+ + K+ D++L P + SSQ LA + GVSQSS+VK Q+LG+ Sbjct: 1 MNILEKIQNQRSNLSSNGIKILDFILDDPASISSYSSQALAAKVGVSQSSIVKLTQRLGF 60 Query: 61 KGFPALKLALSEALASQPE--SPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 KGF A KLA+ E L + P PIHN+I DD + +KL++E T A+ AT N + Sbjct: 61 KGFTAFKLAIIEDLGRKQAILEPERPIHNKINSDDSSLTIAQKLVQEKTHALIATTNAIN 120 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 + T+L A+RI + GIG S L A++ A+KL+KIG A +D H +AT + Sbjct: 121 FSEFELVTTLLNQAQRIQIVGIGGSALTAKDLAFKLLKIGMTALTEQDSHVQIATANTLT 180 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D+ + ISY+G R+E+ +AA + G V+A+T + L++ A+ C+ TIA+E+ Sbjct: 181 KQDVQIVISYSGSRKEILMAAQTAMDKGATVIALTSTKKSPLRKLANFCIDTIADERQFR 240 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+SIS+ AQ ++TDLLF+ L+Q + A I + + ++ Sbjct: 241 SSSISSRTAQNVITDLLFMTLLQIKSDKAKLLIDEISSTMNRI 283 >UniRef50_B1QW74 Transcriptional regulator n=2 Tax=Clostridium butyricum RepID=B1QW74_CLOBU Length = 281 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 78/281 (27%), Positives = 144/281 (51%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L I+Q Y + +S+KK+ADY+L+ S+ +LAN S SSVV+F++KLG+ Sbjct: 1 MNCSLLIKQIYDKMTESEKKIADYVLVNSSEVYKFSASELANITKTSSSSVVRFSRKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GF K+ L++ + E+ I +D +R V K +N ++ T+++ E Sbjct: 61 EGFQEFKIELAKDDINPVENIEYDY---IDTEDNIREVIVKTANKNIQSINDTISLLDEH 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + E + +++A+ I + GIG S L+ + +KL++I NA + H L+ S D Sbjct: 118 TIEEAIKAIKNAKNIYIFGIGESALIGLDLQYKLLRIHKNAMISLESHVQLSMSANISND 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ + ISY G +E+ A + G K + IT F N + + E+ Sbjct: 178 DIAIGISYLGKTKEVYSALSKCKEKGAKCITITKFGENPVSSLGDIKIQVPFVEKDLRIG 237 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +IS+ Q + D+LF+ L +++ + ++ + ++++L Sbjct: 238 AISSRIVQLTVIDILFVGLAKENFSDVEKYLKETRNMIEEL 278 >UniRef50_C5BVH6 Transcriptional regulator, RpiR family n=2 Tax=Actinomycetales RepID=C5BVH6_BEUC1 Length = 299 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 73/278 (26%), Positives = 128/278 (46%), Gaps = 1/278 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L R+ L S++++A+ +L P + +QLA G S++SV +F + +G G Sbjct: 16 VLTRLPGLLPTLRSSERRIAEAILDDPQAVSRDTIEQLAARCGTSKTSVTRFCRTIGLAG 75 Query: 63 FPALKLALSEAL-ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + L+LAL+ + + ES + + +P +V ++L+ N A+ T+ Sbjct: 76 YTELRLALAGDVGRRRDESWRAELGSSADPQNPADVVVDELLTANVRALTETVRTLDRAA 135 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V L SA RI L GIG SG VA + + +IG A A + H L D Sbjct: 136 LAASVDALASAGRIDLYGIGGSGTVAADLQRRFHRIGRVAHAWSESHDALTGAAMLGASD 195 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + +A+S+TG E+ A G +A+T + +A+ A L T A E+ + Sbjct: 196 VAIALSHTGETSEVAAALALARDRGATTIAVTNYPGSAVAAAADLVLVTAAHEERARADG 255 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ HAQ + D L++ + + + +R + V+ Sbjct: 256 LAGRHAQMFVVDCLYVLVAGVLHDESQSGLRRTSEAVR 293 >UniRef50_Q6AH41 Transcriptional regulator, RpiR family n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6AH41_LEIXX Length = 289 Score = 243 bits (621), Expect = 5e-63, Method: Composition-based stats. Identities = 75/280 (26%), Positives = 132/280 (47%), Gaps = 2/280 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +RQ L+ ++ ++A ++ P L+ +LA SQ+S+ +F Q L Y Sbjct: 3 DVLSAVRQAVPRLSATEARIAQTVIEHPQRVVDLTIAELAAVCDASQASIARFCQALRYS 62 Query: 62 GFPALKLALSEALASQPESPSV--PIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ +LA++ A + + + ++I D L+ V K+ + T A+ T Sbjct: 63 GYREFRLAVAAATSREQATRERFELTESEIDPSDSLQEVVAKIAYQETLAIERTARELDA 122 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E L V + +A R+ L GIG+S L AQ+ KL +IG A D H L++ P Sbjct: 123 EALDAVVAAIIAASRVDLYGIGSSILTAQDLQQKLSRIGLTAFCSVDSHLALSSAALQKP 182 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 ++ +A S++G RE N A G +AIT +++ + L T A E S Sbjct: 183 GNVAIAFSHSGETRETNHALAVARAAGATTVAITNVPESSIAAVSDLLLMTQARENFYRS 242 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++++ AQ L D LF+ + Q+ + + +R + V+ Sbjct: 243 GAMASRTAQLALVDFLFVRVAQRLYDQMTDSLRLTYEAVR 282 >UniRef50_Q2SNY6 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SNY6_HAHCH Length = 285 Score = 243 bits (621), Expect = 6e-63, Method: Composition-based stats. Identities = 63/280 (22%), Positives = 132/280 (47%), Gaps = 5/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +RQ L +S++K+A+ +L P+ H+ LA EAGVS+ ++V+F + + + Sbjct: 6 DILSWLRQNRDTLRKSEQKVAECVLRNPNDVIHMRIVDLATEAGVSEPTIVRFCRTICFD 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F + K++L++ LAS + D L+ +G K+ + +++ N + ++ Sbjct: 66 SFQSFKVSLAQQLASMQRQTPFRARS----GDSLQQLGAKIFSDVQSSLQQVFNQLAWDR 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + + ++ R+ G GAS VA + K ++ + A D + +D Sbjct: 122 IEQACAWISNSPRLYFFGYGASAAVAADAQQKFFRLKPSTHACPDPDTQMLIAGLVETND 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++AIS++G L + + G KV+AI +AL A+ + +E A Sbjct: 182 VIIAISHSGRTNNLIQSCMQARASGAKVVAI-SPPQSALANIANLNIGVSVDENADAFTP 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +++ A M+ D + L Q+ E +++ ++ + L Sbjct: 241 LASRLAHLMILDTIASNLFQKLDEQHVQKLNQAKKNLSSL 280 >UniRef50_C0X1P6 Transcriptional regulator RpiR n=21 Tax=Enterococcus RepID=C0X1P6_ENTFA Length = 285 Score = 243 bits (621), Expect = 6e-63, Method: Composition-based stats. Identities = 63/283 (22%), Positives = 133/283 (46%), Gaps = 13/283 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + I + Y L +S++K+AD++L ++ + + + +A V +++++F QKLG+ Sbjct: 14 MNYIYLINEHYPLLTKSERKVADFILNSGESIIYSTMNDIKTKANVGDATIIRFCQKLGF 73 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+ +++ S+ + +++ K + +T + +EE Sbjct: 74 SGFSDLKIEIAKEDFSKKKEQP-----------SSGKYHDEVAKSLIEVLQSTSCLINEE 122 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 KL + + ++ A + + G+G+SG + + +++G A AV D H + Sbjct: 123 KLTKAIQLINQASSLYIFGVGSSGNTSLDLESMFLRVGIQAKAVLDPHYQAQVASLLTDR 182 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++ S +G ++ + G K+LAIT + + + + A L T EE N Sbjct: 183 DLVIIFSLSGKTKDTYDSLKIAKNNGAKILAITNYIHSPIGKSADLVLQTAIEE-FLNGG 241 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPE-RIRHSEALVKKLV 282 S++ +Q + DLL Q + + + R + +++ K + Sbjct: 242 SLAGKISQLYICDLLVHEYEQNNKINSLDLREKVLRSIIDKRI 284 >UniRef50_B9DJX2 Putative RpiR family transcriptional regulator n=1 Tax=Staphylococcus carnosus subsp. carnosus TM300 RepID=B9DJX2_STACT Length = 288 Score = 242 bits (620), Expect = 8e-63, Method: Composition-based stats. Identities = 71/280 (25%), Positives = 130/280 (46%), Gaps = 7/280 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 ++ IR++ + L ++++ +A +LL P+ +S+Q L + S ++V++ A KLG+KG Sbjct: 6 LIIHIREQMKHLTKNEQHIAQFLLEHPEKVLEMSAQTLGDVTKTSSATVIRCAHKLGFKG 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LKL+LS L + +I D+ R + KL+ + T + ++ L Sbjct: 66 FVDLKLSLSRNLPQHEAHN----YKEIAQDESPREIKRKLLSRAAYTLETTEVLLEDQAL 121 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD- 181 V L ++I++ G+GAS +VA++ K + G D H L + D Sbjct: 122 EALVDKLYDVQKIVVFGVGASHIVAEDIYQKFTRAGMEVIQSADAHVLATVLAGYHKKDN 181 Query: 182 -LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT-IAEEQATNS 239 L + +S +G +E A G V AIT + + L A L + E++ Sbjct: 182 VLFIGVSNSGHNQETLRLAHVAHYYGATVAAITSRSDSKLAGEADIVLLHDASSEKSLRL 241 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 A+ S+ AQ M D+LF + +D + + ++ V+ Sbjct: 242 AATSSLIAQLMTVDILFYTYLSKDYQAHVAHLSETKKAVE 281 >UniRef50_C7REF2 Transcriptional regulator, RpiR family n=2 Tax=Anaerococcus RepID=C7REF2_ANAPD Length = 279 Score = 242 bits (619), Expect = 8e-63, Method: Composition-based stats. Identities = 81/281 (28%), Positives = 153/281 (54%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M ++I++R + SD K+A Y+L +P ++SQ+LA+ G SQS++++F QK+GY Sbjct: 1 MTYTIKIKERSEDFTPSDTKIAKYILDKPGEVIKINSQKLADLTGTSQSAIIRFVQKIGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG+ +LKL ++++L + + + I DD + + EK +++ T + E+ Sbjct: 61 KGYTSLKLDIAKSLENDEINLKSEV---ISADDKVGDIIEKSKINVISSIEKTYALIDED 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ + + + A + L GIG+SGLV ++F +KL + G A D H L+ + D Sbjct: 118 QISKAIDNIVYANFVYLAGIGSSGLVCEDFLYKLQRSGKKAFYETDAHTNLSLLTNIKED 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DLL+ I+YT + +E+ +AA+ +G K+++IT L + + E+ Sbjct: 178 DLLICITYTALSKEVLIAAEYAKTIGAKLISITKAGRGKLANMSDILIPIPEIEKKMRYG 237 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +IS+ A ++TD+LF I ++++ + + S+ L KL Sbjct: 238 AISSRFASQIITDILFYGYISKNMDEVVKNLMVSKELTDKL 278 >UniRef50_C5C1Y9 Transcriptional regulator, RpiR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C1Y9_BEUC1 Length = 307 Score = 242 bits (619), Expect = 9e-63, Method: Composition-based stats. Identities = 70/280 (25%), Positives = 125/280 (44%), Gaps = 1/280 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L +R+ L S ++ A+ +L P + + LA +G S S+V + ++LG Sbjct: 16 GILAELRRLLPDLPDSVRRTAERVLADPVASVAGTITDLAEASGTSPSAVSRLCRRLGVD 75 Query: 62 GFPALKLAL-SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+PAL++A+ ++A AS + I I D L V L + A++ TL + Sbjct: 76 GYPALRIAVVADATASASSPWEIDISRTIGPTDSLEDVAGTLGAATSRAVHDTLAGLDLD 135 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + + ARR+ L G+ S ++ +L +IG + D+H L P Sbjct: 136 VLRDVAHAVAGARRVHLYGVSGSAVMTAELQLRLHRIGIATWSFADVHEGLTGAALLGPG 195 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ +A+SYTG E +A+TG ++L A L T+ EE Sbjct: 196 DVAIAVSYTGETIETLEMLRAAGSRDALTVAVTGAPRSSLAAVADRILVTVTEETTFREG 255 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++A ++ + +LL++A+ Q E E + + V++ Sbjct: 256 PLAARFSELTVVELLYLAVGQLTYERTTELLTQTALAVRR 295 >UniRef50_A6D304 DNA-binding transcriptional repressor RpiR n=1 Tax=Vibrio shilonii AK1 RepID=A6D304_9VIBR Length = 289 Score = 242 bits (619), Expect = 9e-63, Method: Composition-based stats. Identities = 66/279 (23%), Positives = 129/279 (46%), Gaps = 4/279 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + IR L ++++ +A+ L + S ++A VS + +VK ++KLG+ G Sbjct: 13 VIPNIRMMMPSLTKTEQSIAENFLQPHFLQKSTSINEVAERLSVSPALIVKVSKKLGFSG 72 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK E+L +Q E+ S ++ DD + K+++ + A+ LN + Sbjct: 73 FKQLK----ESLYAQSETQSYAPSERLLPDDSAEKIVSKVLQNSINALTEILNFVDVSMV 128 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 L AR I L +G S ++ ++F KL++IG ++ +D H +L + + D+ Sbjct: 129 DAAAEALLKARNIELFAVGGSSIICEDFQHKLLRIGIKSSVPKDRHLMLMSASIMTDQDV 188 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 +L +S++G +L A + + G V++IT L + LY A + + Sbjct: 189 VLVVSHSGQTVDLMDAVRQAKQSGATVISITNNYHAELSSLSDIPLYAPASPEPVLGKNG 248 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +A + + D L+ + + LA E + + V++L Sbjct: 249 TARLVKLAMIDSLYATMASKMPSLAEESLSKTIRAVERL 287 >UniRef50_D0KLH9 Transcriptional regulator, RpiR family n=1 Tax=Pectobacterium wasabiae WPP163 RepID=D0KLH9_PECWW Length = 320 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 77/279 (27%), Positives = 137/279 (49%), Gaps = 1/279 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 I GL+ +++ +A+Y+L P L ++LA E GVS++++V+F + +GY Sbjct: 35 KVRTYIANILHGLSDTNQTIANYVLQNPSMVAQLPVKKLAVEIGVSEATIVRFCKHIGYA 94 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G LK AL+ L S+P+ I +D V +K+ A+ T+++ + Sbjct: 95 GLLELKSALNREL-FDDSDLSLPVTPDILMNDTRHDVAQKIALTVDRAVKETIDLIDMQT 153 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 +++ V++ SARR++ G GASGL A K+ +IG ++ A D ++ + PDD Sbjct: 154 INQIVSLFISARRVMFIGFGASGLAALEARDKMNRIGIDSDAFTDRFSMTLKLANLKPDD 213 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++A S++G E+ A + G LAIT T + L ++ L T E + S Sbjct: 214 LVVAFSHSGETPEVVNAFKLAEKAGATRLAITHSTHSPLTSLGNYVLLTCGESERYQGDS 273 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 I +Q + + L L +Q+ + + +AL+ K Sbjct: 274 IGTRVSQLFMIEFLCTELTKQNFKDFSSQSISIKALLIK 312 >UniRef50_Q040R4 Transcriptional regulator n=8 Tax=Lactobacillus RepID=Q040R4_LACGA Length = 283 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 75/281 (26%), Positives = 137/281 (48%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ ++ Y + KK+ADYLL P T +Q L S +S+++F Q+LG+ Sbjct: 1 MDLSTKVLNNYPNFKGASKKIADYLLAHPKTFLQEDAQGLGKMTKTSAASMIRFCQQLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG ++ L++ E PI + D +V +KL+ T ++ Sbjct: 61 KGLKDFQIQLAQDTPQDNEETIDPI---VDHHDNPHIVLQKLLSSIEKNTEQTAHLIDGL 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L++ + L++A RI L G+GAS L AQ+ +K ++ N +D+H L + S Sbjct: 118 ALNQAINFLKNADRIYLAGVGASSLPAQDLYYKFIRSDKNVVFNQDIHIALERICYSHST 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D L+ SY+G+ +E+ L AD+ + ++ +T + L + A L +E+ Sbjct: 178 DALVIFSYSGLTQEILLMADQARKNHTPIIVVTRSRQSPLVELADVVLGVSTDEKLLRVG 237 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +I++ ++ ++ +LF+A I Q+L ER R +E + +L Sbjct: 238 AINSLFSEMFVSSVLFLATINQELPRLEERFRETELITNQL 278 >UniRef50_D0XGH5 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0XGH5_VIBHA Length = 296 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 68/276 (24%), Positives = 128/276 (46%), Gaps = 4/276 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + IR R L ++++ +A+ L + S +++A GVS + +VK ++KLG+ G Sbjct: 20 VIPNIRMRMPSLTRTEQSIAENFLKPHFMQKSTSIKEVAERLGVSTALIVKVSKKLGFSG 79 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK AL+ S +PS Q++ DD + K+++ + A+ LN + Sbjct: 80 FKQLKDALNAHHHSDSYAPS----EQLQPDDSCEQIVTKVLQNSINALTEILNFVDANMV 135 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + +AR I L G S ++ ++F KL++ G A+ RD H +L + S D+ Sbjct: 136 SAAAEAIINARNIELYAAGGSNIICEDFQHKLLRFGIRASVPRDRHLMLMSASVLSEKDV 195 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 +L +S++G +L A + G +++IT L Q + + LY A + + Sbjct: 196 VLVVSHSGQTVDLMDAVRLAKQSGATIISITNNFHAELSQLSDYPLYAPASPEPLLGKNG 255 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 A + + D L+ + + + A E + + V Sbjct: 256 IARLVKLAMIDSLYATIASKIPDQAEENLEKTTKAV 291 >UniRef50_D0I0X8 Sialic acid utilization regulator RpiR family n=1 Tax=Vibrio cholerae CT 5369-93 RepID=D0I0X8_VIBCH Length = 282 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 58/274 (21%), Positives = 127/274 (46%), Gaps = 6/274 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L R+R +G + K +AD+++ D+A++L+ +LA + S+++V++ + LG+K Sbjct: 8 NLLSRLRYGMEGYSPKLKTVADFIVSNADSAQYLTITELARDTMTSEATVIRLCRDLGFK 67 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ ++AL+ ++ P +N + +D + + ++ T + ++ Sbjct: 68 GYSDFRMALAIEISQ----PQFTKNNDVAKEDG--DRIDDATQSAITSLQDTSILIDRKQ 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 ++ M+ A I G+GAS +V + +++L +IG ++ D H S+P D Sbjct: 122 INRICQMIHQADNIHCVGVGASSIVGRYLSFRLTRIGKSSTMFEDTHIAAMRAVKSTPSD 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L AIS +G +++ A + V+++T + L + + E + Sbjct: 182 LWFAISSSGSTKDVVYVATRAKKQQSPVVSLTNIRHSPLSVTSDEVMVAARPEGPLTGGA 241 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 ++ + +L D+L L+ + E A +E Sbjct: 242 FASKVSALLLVDILINQLVAEHAEYAESVKDTAE 275 >UniRef50_B6G0W9 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G0W9_9CLOT Length = 310 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 58/277 (20%), Positives = 129/277 (46%), Gaps = 1/277 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RI +Y L++S+KK+AD++ A L+ +++A EAGVS+ S+++F++ +G G Sbjct: 31 LLFRIATKYMALSKSEKKVADFIKNFNGKAEKLTMKKVAKEAGVSEPSIMRFSKSIGLDG 90 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK L + + I +D + ++ K++ + + L S + Sbjct: 91 FNELKYCLMKTKKDDEGTMKPLHGFDINREDTIDMIPGKIVMTVENQINSMLESISLKSY 150 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + + +A+ + + + S A + A KL+ +G N D + + + +D+ Sbjct: 151 SDMINCIINAKNVDIYSVENSVSSANDLATKLLYLGINVKMYTDSYLQKISAYNLTSEDV 210 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + ISY+G ++ + G + IT + + + + A L + +Q +I Sbjct: 211 AIGISYSGNSKDTVEMIKTAKKRGATTVVITNYKDSKIVKYADI-LICTSSDQMLYGDAI 269 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + Q ++ D++++ +I D + E + +E ++ Sbjct: 270 FSRAIQLVINDMIYMGIIHSDYDKYIEILNKNEKAIR 306 >UniRef50_D0R5V5 Transcriptional regulator n=10 Tax=Lactobacillus RepID=D0R5V5_LACJF Length = 272 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 64/280 (22%), Positives = 120/280 (42%), Gaps = 11/280 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + R Q L +S+ KLA+Y+ + + + + L +++V+ +KLGY Sbjct: 1 MEFIQRYNQNKDKLTKSENKLANYIATHTEHVIYDTIKSLGTANNTGDATIVRLCKKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+AL++ + K++ +++ T + + Sbjct: 61 SGFSDLKIALAQDSMMTTSKSHEEAQ-------TSSELSSKVL---ISSIEKTEELINPS 110 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V++L ARRI + G+G SG A+++ ++IG A A D H + S D Sbjct: 111 VLKQAVSLLAKARRIHIFGLGHSGESARDYERTWLRIGLIANAESDPHIQVQVATLLSKD 170 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++ +S +G ++ + G K++AIT + + Q L T E N Sbjct: 171 DLVVGLSLSGHTKDTYDSLKVAKEYGAKIIAITNDLTSPIAQLGDVSLQTSVSE-FMNIG 229 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +++ +Q L D+L + + + + A V K Sbjct: 230 TVAGQVSQLYLCDVLAREYEKLNKVDVDKIKEQALAAVMK 269 >UniRef50_D2AGN5 Transcriptional regulator, RpiR family n=1 Tax=Shigella flexneri 2002017 RepID=D2AGN5_SHIF2 Length = 333 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 91/265 (34%), Positives = 151/265 (56%), Gaps = 3/265 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L +IR +++K+AD+L + + +SS+Q+A + G+SQSS+VKFAQKLG Sbjct: 68 MLYLTKIRNAESEFTGNEQKIADFLRARVSELKSVSSRQMAKQLGISQSSIVKFAQKLGA 127 Query: 61 KGFPALKLALSEALA---SQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 +GF L++AL + + + ++ +H+ I DD L ++ KL +E A+ T + Sbjct: 128 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALF 187 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 +L + + ++ A I +TG+G S LV ++ ++KLMKIG+ A D H QA Sbjct: 188 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 247 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 D+ +AISY+G ++E+ L A+ + G V+AIT + L++ A L T++ E Sbjct: 248 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLADSPLRRLAHFTLDTVSGETEW 307 Query: 238 NSASISACHAQGMLTDLLFIALIQQ 262 S+S+S AQ +TDLLF+ L+Q Sbjct: 308 RSSSMSTRTAQNSVTDLLFVGLVQH 332 >UniRef50_B0NYS8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0NYS8_9CLOT Length = 282 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 64/278 (23%), Positives = 120/278 (43%), Gaps = 4/278 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +I Y L ++KK+ADYL+ P A +S +LA+ SQ+++++F +K+G KG Sbjct: 7 VRDQIFSTYDSLYDAEKKVADYLISHPSEAIEMSVSELASHCDASQATIIRFCKKIGCKG 66 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK+ L+ Q E + I D ++ + AT + + E+L Sbjct: 67 FHQLKIKLAGE-QRQQEEQVISNEIDIDQMDKS---LNNIMISKVEEIKATFHNFNPEEL 122 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 E V ++ A I +G + +A + ++K ++G A + + A + D+ Sbjct: 123 REIVDLIIHANLIEFAAMGDTIPIALDGSYKFNQLGLKAVSSTIWESQEAFSRTLRKGDV 182 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 AIS +G + L + + G +AIT + + L + H L T E + Sbjct: 183 FFAISASGASKRLVKMVEIVKDNGVTTIAITNQSKSPLAELCDHVLLTATREHIFHDQVS 242 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A + D LF+ L + +H +++ ++ Sbjct: 243 FTRMAAMSVIDTLFLLLFSTKWDSFENVAQHEQSVAEE 280 >UniRef50_Q03CI3 Transcriptional regulator n=10 Tax=Lactobacillaceae RepID=Q03CI3_LACC3 Length = 280 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 67/278 (24%), Positives = 123/278 (44%), Gaps = 4/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L++++ L+ +KKLA YL PD A + +L+ GVS +++ +FA+ LGY Sbjct: 3 DFLVQLQIYKPNLSGQEKKLAAYLQAHPDHASQANISELSQLTGVSTATISRFAKALGYT 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F AL++AL++ + ++ D + + +K+ N A+ TL + Sbjct: 63 NFQALRMALAQ----TSPEDDHALFAELSPKDSVDTLAQKIFTSNIDALRTTLANLDTDA 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + V + A + L G+GAS LVA + K ++ A D H L P D Sbjct: 119 LTKAVKWITHAEHLGLFGLGASNLVALDGYHKFLRTAIPVAYAADYHMQLMAATHLGPRD 178 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++ S++G ++ A+ + ++ ITG + L + A +AEE + + Sbjct: 179 AMILTSHSGEDKDAIALAELAKKQQVPLIVITGSPTSRLVKMADAAFVAVAEESRYRTEA 238 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + A A+ + D LF+ + R A + Sbjct: 239 LHALIAEISIMDTLFMISAIKTDSQTAPLFRQVRATID 276 >UniRef50_Q03CT7 Transcriptional regulator n=7 Tax=Lactobacillus RepID=Q03CT7_LACC3 Length = 289 Score = 240 bits (614), Expect = 3e-62, Method: Composition-based stats. Identities = 69/281 (24%), Positives = 130/281 (46%), Gaps = 5/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + L++++KK+ DY++ +S LA AG S +SV + A++L + Sbjct: 1 MSVKGNYQSTRSELSETEKKIVDYVMAHSQAVLTMSVHDLAKAAGTSPASVSRAARRLQF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ LK+ L+ L +I+ + L + +KL+ + ++ T++ +E Sbjct: 61 SGYNELKMQLAADLKGDTNQSD---DQEIQKNATLTTIKQKLLIDANQSLRETVDQINEA 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS-P 179 + + ++ + R+++ G+GAS L AQN A K ++G+ D++ L + Sbjct: 118 NVDTIINLIHQSDRLLVFGVGASYLAAQNIAQKWGRLGYPCHFSDDLNLFLPLAATADVE 177 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE-EQATN 238 L IS +G E+ LAA + G +V+ T N+L + A + T E Sbjct: 178 QTLCWFISNSGESPEVVLAAKLAKKAGLQVIVTTKLGKNSLTKYADVSIQTSQPMEARNR 237 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 A+ + H Q ML D+L+ A + + + A S+A V Sbjct: 238 FAATQSLHTQFMLIDILYYAYVSRYYDAAKIATDQSKAAVT 278 >UniRef50_UPI00016945F6 hypothetical protein Plarl_13824 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI00016945F6 Length = 248 Score = 240 bits (613), Expect = 4e-62, Method: Composition-based stats. Identities = 65/242 (26%), Positives = 126/242 (52%) Query: 40 LANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVG 99 LA A VS++++V+ ++ L KG+ LKL ++ LA S + +I D + + Sbjct: 3 LAELAEVSEATIVRLSRSLNLKGYQELKLRIAADLAQSLNSNLAESYQEIHMDASSQSLV 62 Query: 100 EKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF 159 E + N ++ T++V + ++L + +L AR+I L GIGAS ++AQ+F KL +I Sbjct: 63 ESISHNNMRSIQDTMSVLNIKELDRAIEVLGGARKITLFGIGASAVIAQDFKQKLTRINR 122 Query: 160 NAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNA 219 A D + D +L ISY+G +++ LA G ++++T F N Sbjct: 123 WCEAAYDFDSQATLAANLQEKDAVLGISYSGNTQDILLAMQAAKERGATLISLTKFGHNP 182 Query: 220 LQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + ++A L+T + E++ S ++++ AQ + D+L++ + +Q+ E + ++ VK Sbjct: 183 VAEQAHIRLFTSSLEKSIRSGAMASRIAQLNVIDILYVGIARQNYEENILALENTRKAVK 242 Query: 280 KL 281 + Sbjct: 243 MM 244 >UniRef50_C8SX74 Transcriptional regulator, RpiR family n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SX74_9RHIZ Length = 314 Score = 240 bits (613), Expect = 4e-62, Method: Composition-based stats. Identities = 60/275 (21%), Positives = 114/275 (41%), Gaps = 5/275 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + ++ Y L ++++++AD +L A S+ LA AGVS+ +V +F + +G + Sbjct: 27 DIISLVKDSYSELRRAERRVADVVLDDVKYAVDASNAALAQRAGVSEPTVTRFCRAIGCE 86 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G KL L+++L + G + E A+ + Sbjct: 87 GLRDFKLKLAQSLVVGALY---LAKSPAPGSGNGMPFWNAVFGEARRALQEAERQLDPVE 143 Query: 122 LHECVTMLRSARRIILTGI-GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + ++ AR++ + G+ G+S +AQ ++L + G A D + + T P Sbjct: 144 LQKAAELIAKARQVTVFGLGGSSSALAQETQYRLFRYGITVNAQCDPYLMRMTASTLKPG 203 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++AIS TG RE+ A + + +T L + L E Sbjct: 204 DLVIAISATGRTREVIEAVELAKHYRANAIGVTA-PDTELARACDVRLAVAVPEYPDTLK 262 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 ++ +A + DLL +A + A E +R + Sbjct: 263 PTASRYAFLAMIDLLAVASAYKLDASARETVRRIK 297 >UniRef50_C6VNS3 Transcription regulator n=3 Tax=Lactobacillus plantarum RepID=C6VNS3_LACPJ Length = 292 Score = 239 bits (612), Expect = 6e-62, Method: Composition-based stats. Identities = 62/278 (22%), Positives = 114/278 (41%), Gaps = 2/278 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L IR Y L+ +D+K+ADY++ P S LA GVS ++V +F +++ + Sbjct: 12 VLTLIRSYYPNLSVTDRKIADYIIADPIKTAAQSISDLAAAVGVSTATVSRFVKRISFSS 71 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F L+ A E + + + + E +++ T V +E L Sbjct: 72 FRDFSRELTA--AEPIEQTNAEAFQDVEKQTTFKGIAESTFNSIRSSLDQTSQVMTEADL 129 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V +L +AR I G+G S + A + K ++ G A D L + D+ Sbjct: 130 KRAVELLLNARSIGFYGLGGSAVAALDGYHKFVRTGIPCAHNSDYDMQLMQAAQMNASDV 189 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + IS+TG ++ + V+A+T F + L + ++ ++AEE S + Sbjct: 190 AVVISHTGRNQQTLQVLATLTSQSVPVIALTSFGNSPLAKDSTVAFISVAEEINYRSEGL 249 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ AQ + D LF+ E + + + Sbjct: 250 TSLIAQMSIIDSLFLMTAVHGNIEMAESLGRVREAISQ 287 >UniRef50_Q1WQV4 Transcriptional regulator, RpiR family n=4 Tax=Lactobacillus RepID=Q1WQV4_LACS1 Length = 274 Score = 239 bits (611), Expect = 9e-62, Method: Composition-based stats. Identities = 66/278 (23%), Positives = 133/278 (47%), Gaps = 11/278 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L I + L++ ++K+A +L P + ++ +LA +AGVS +++ +F +++ Sbjct: 1 MNLLNNIEAIFSTLSRQERKVALKVLQNPQEVQSMNITKLAKKAGVSNATITRFVRRMEC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F KL L+ + AS PE P +G+K+ + + T + Sbjct: 61 SDFHDFKLKLAISAASSPEVPVSS---------ESDSMGDKVYEFYQKVLQGTWKQLDTD 111 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +H V + ARR+ + G+G+SG AQ F +L+++G A D H + + D Sbjct: 112 TIHNIVHAITKARRVYVYGLGSSGYTAQEFTQRLIRMGIAAFCTVDSHMMFIDSTIVNSD 171 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++AIS +G ++N+A + G K+++ITGF + L + ++ N+ Sbjct: 172 DVIIAISQSGNTDDVNVACSLAKQKGTKIISITGFYQSPLIELSTWSAVVKNSNFVDNTR 231 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 I++ A + D++ + L+++ + + L+ Sbjct: 232 FINSQLAIVYVIDIITMELMEK--SEYSSTMNKTVELI 267 >UniRef50_C5EPZ9 Transcriptional regulator n=2 Tax=Clostridiales RepID=C5EPZ9_9FIRM Length = 295 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 64/289 (22%), Positives = 124/289 (42%), Gaps = 12/289 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 I++ Y L +S++K ADY L +S +A AGVSQ +V++F + LG +G Sbjct: 5 LEYEIKRIYASLRKSEQKAADYYLGYDGPVETMSIAAMARAAGVSQPTVMRFVKALGLEG 64 Query: 63 FPALKLALSEALASQPESPS-----------VPIHNQIRGDDPLRLVGEKLIKENTAAMY 111 F K + +A S + +I D V +++ ++ + + Sbjct: 65 FKEFKYQVLKASMGGNGSGMGEEEGGRSEEVLRYGYEISARDRPEEVPGRVVAQSVSYLD 124 Query: 112 ATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL 171 L S + ++ AR+I + + S VA + KLM +GFN D++ Sbjct: 125 DALKHISPSSIGRAAKLICGARQIAVYYVENSASVAGDLVTKLMYLGFNCIMYNDIYLQH 184 Query: 172 ATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI 231 + D+ + ISY+G + + G +AIT F + + A L T Sbjct: 185 ISAGNLDSRDVAIGISYSGSSKNTVDVMKLAKKKGAATIAITNFEHSLIAGHADILLCTS 244 Query: 232 AEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ Q +I + +Q + D++++ +I +D E++ S ++++ Sbjct: 245 SQ-QLLYGNAIFSRMSQTAVVDMIYMGIILRDYGHFTEKLDESSRIIRR 292 >UniRef50_C0C246 Putative uncharacterized protein n=2 Tax=Clostridium hylemonae DSM 15053 RepID=C0C246_9CLOT Length = 292 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 115/278 (41%), Gaps = 3/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L R L ++K++A+++L P +S ++LA ++++V+ + +G Sbjct: 9 NILATTRFLLPSLTAAEKRVAEFVLASPKEVTRMSLKKLAVRCECGEATIVRLCKTIGVS 68 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ LK L L ++ + + ++ + N + TL V + E+ Sbjct: 69 GYAELKSLLETQLQLPAVKEESV---RLSTGQGMGEIVARVFELNILNLRRTLEVAAVEE 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 +L +A +I IG + + + +IG++ A D + D Sbjct: 126 YENACEVLSTANKICFFAIGDAMFPCSYASLRFRRIGYDCYADSDADVQIVNACNMKEGD 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + +AIS++G +++ A G + IT + L + + LY + + + Sbjct: 186 VAIAISHSGRTKQVVEAMRIAKSRGAVTICITKAGKSELTKYSDIVLYNVTTDTTVDKEI 245 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 I+ A+ + D +++ ++Q+ + R++ +K Sbjct: 246 IARRVAEQAMLDAVYMGVLQKMEANSFARLQEVSENLK 283 >UniRef50_C2H8J8 Bifunctional RpiR family transcriptional regulator/sugar isomerase n=16 Tax=Enterococcus RepID=C2H8J8_ENTFC Length = 286 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 63/280 (22%), Positives = 140/280 (50%), Gaps = 6/280 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + RI + + ++KKLA+Y++ + +++ +LA +G+S +VV+F++K+G+ Sbjct: 5 MSVISRIESMMEDYSSAEKKLANYIIGNIEKVPTMTANELAEASGLSAPTVVRFSKKIGF 64 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + K+ +S L + + + I ++ + KL A+ T+++ EE Sbjct: 65 QSLTDFKITISTELQTGIDEG----FSDIEANESFYSIKNKLGNNAQVAIKETVDILEEE 120 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + V L +A + L G+GAS LV ++ K ++G +D+H LL + ++ Sbjct: 121 TIQKVVECLETAESVFLYGVGASSLVVEDILQKWSRVGKPIIFEKDIHVLLPQLVSNEKK 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNS 239 +L +S +G ++ A+ + +++A+T F N L + A + T +E S Sbjct: 181 KVLWLVSNSGRSTDVVALAELAKNMNIEIIALTQFGNNPLSKIADVLVQTSRPKEITNRS 240 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 A+ ++ AQ D++F + ++ E E+++ + ++ Sbjct: 241 AATNSLLAQFATIDIIFYFYMAKN-ESLSEKVKKTREAIQ 279 >UniRef50_C8JWL0 Phosphosugar-binding transcriptional regulator n=3 Tax=Listeria monocytogenes RepID=C8JWL0_LISMO Length = 273 Score = 238 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 65/282 (23%), Positives = 125/282 (44%), Gaps = 10/282 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L I + L++S++K+A +L PD +LS LA A V +S++V+F++K+G Sbjct: 1 MDLLATISSYFPSLSKSEQKVAQLILSNPDEVENLSINDLALMANVGESTIVRFSRKIGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+AL + SQ + D + + ++ + T + +E Sbjct: 61 TGFQDLKIALVKYQTSQKQ----------NITDESNEAKDLVYRQFVDGLQDTKSFIEQE 110 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 KL + M+ A + + +G S +A + +L ++G V D H V Sbjct: 111 KLEQAAKMIHRAEHVYILSVGTSAFIAMQLSNRLKRLGKFVEFVPDGHLQSIYVTMVKKT 170 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ IS +G +E+ + + G V+ ++ F + + Q L ++E +++ Sbjct: 171 DIVIGISKSGNTKEVIQNIELASQSGAPVVTLSNFINSKISQMGDVSLVASSKEFLSDAG 230 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 S SA +Q L D L L+ + + + K + Sbjct: 231 SFSAEVSQLYLLDTLIKVLVDINPSSYHNIRSLTNKALVKRI 272 >UniRef50_Q2J8J9 Transcriptional regulator, RpiR family n=1 Tax=Frankia sp. CcI3 RepID=Q2J8J9_FRASC Length = 293 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 62/260 (23%), Positives = 114/260 (43%), Gaps = 4/260 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RIR L+ +++++A +L P H S +LA +G S ++VV+F Q LG +G Sbjct: 18 VLERIRALSASLSSAEQRVARQVLADPVAMIHQSVSELAQVSGSSPATVVRFCQSLGLRG 77 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + LKLAL + +++ D + K++ +A+ L Sbjct: 78 YQELKLALIRE----TLPVERQLVDEVSAADGPDEIAGKVLGGAASALTEAARGIDGGVL 133 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 ++ +A R + +G S +A + A++L +G +A D H T + + DL Sbjct: 134 AAIADLVVAAPRTLFVAVGTSAPLAMDAAYRLTTVGVDARFAGDAHVQHVTARMLAAGDL 193 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 +A+S+TG E A + G AIT F + L + H + + E A ++ Sbjct: 194 CVAVSHTGSTAETLAAMRAAVDAGAHTAAITSFARSPLTELVRHAVVVGSRETAYRIEAM 253 Query: 243 SACHAQGMLTDLLFIALIQQ 262 ++ + D LF ++ + Sbjct: 254 TSRIVHLSVLDALFALVVVR 273 >UniRef50_C2HLD1 Transcriptional regulator n=3 Tax=Lactobacillus RepID=C2HLD1_LACAC Length = 284 Score = 237 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 63/278 (22%), Positives = 134/278 (48%), Gaps = 5/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N I+ + L + ++ L DY++ P+ S Q+L+ + G+S +++V+F +++G Sbjct: 3 NIFSIIKGKKSQLPKKEQLLGDYIIANPENVISSSIQKLSKDTGISTATIVRFCREIGTN 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LKL L A S + +++ + + + + +A+ AT + ++ Sbjct: 63 GFSDLKLQLVAA----QSSVNNNDYHEFDAGEGIAAIKNTMAARFESAIEATQSGLNDNS 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V + ++ I++ G GASG+VA + K M++G N + D+H LA + + + DD Sbjct: 119 VEKAVRKIYNSSSILVYGAGASGIVASDMYQKFMRVGKNINYISDLHVALAQLASFTSDD 178 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE-EQATNSA 240 LL+ IS G E++ + G L +T + + ++A L T E + S Sbjct: 179 LLILISNDGKTTEVSDIQKVADKFGIPTLLLTANPRSFVAKKADLVLLTQDIGEPSIRSG 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + ++ +Q + D+L + + + ++++ S Sbjct: 239 ATTSLISQMFVVDVLVFSYVSVHSDEVLKKLKRSNEAT 276 >UniRef50_B1R0U2 Transcriptional regulator, RpiR family n=9 Tax=Firmicutes RepID=B1R0U2_CLOBU Length = 284 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 55/277 (19%), Positives = 122/277 (44%), Gaps = 3/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I Y +++KK+ADY+L ++ +LA AG S ++V +F +K K Sbjct: 6 SIIDTIYAEYNSFFEAEKKIADYILKYGTKLIEMTISELAEAAGTSDATVTRFCRKCNMK 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ L++ L+ + + + ++ ++ ++ M T+ +EEK Sbjct: 66 GFHHLKITLAKELSESQKEDTRVSGD--VSEENIKESLNNILFNKIEEMKQTILTINEEK 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 E + +LR+A + +G + VA + +K ++G + A +A +D Sbjct: 124 FKEILQILRNAGIVQFVAVGNTIPVALDGCYKFNQVGVASVANTIWETQIAYTYNLKEND 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++AIS +G + L + G +AIT + L + +++ + T E+ Sbjct: 184 VVIAISNSGASKRLIDVIEIAKEKGAVTIAITNSDKSPLAKLSNYHIKTATREKLFLEEY 243 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + + + ++LF+ + + + + E + Sbjct: 244 YFSRISAMTVIEILFLFMTVGKHD-VYKTLSRHEQSI 279 >UniRef50_A1BB20 Transcriptional regulator, RpiR family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1BB20_PARDP Length = 280 Score = 237 bits (605), Expect = 4e-61, Method: Composition-based stats. Identities = 67/267 (25%), Positives = 112/267 (41%), Gaps = 3/267 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RIRQ +++++A+ +L P TA S A A VS+ S+++F ++L G Sbjct: 15 MLDRIRQSLASFTPAERRVAEAVLDTPSTAITWSISDAARIAKVSEPSIIRFCRRLDCDG 74 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 FP +L L++ LA +P DDPL + + + + A+ L Sbjct: 75 FPDFRLKLAQQLAKHQPAPQPLARPGSGNDDPLAAMVDDIFQRAGQAIEEARRDLDLGAL 134 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V ML ARR+ + G G+SG +A +L + A A D + + P DL Sbjct: 135 RAAVAMLGKARRVDIYGYGSSGFMASEAQHRLAALAIPAVAYSDPTLQMHSAPLLGPGDL 194 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL-YTIAEEQATNSAS 241 L +S++G+ L + + G VLAI + + A L + + A Sbjct: 195 LFVLSFSGLTSYLISNIEIARKAGAPVLAI-SPKGSIVASLADVNLNLNAYRQSSGRMAV 253 Query: 242 ISACHAQGML-TDLLFIALIQQDLELA 267 + A + D LF A+ ++ Sbjct: 254 PTGRVAPMYVLLDALFAAMAEEMGGEH 280 >UniRef50_UPI000197BCAC RpiR family transcriptional regulator n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197BCAC Length = 283 Score = 237 bits (605), Expect = 4e-61, Method: Composition-based stats. Identities = 61/274 (22%), Positives = 129/274 (47%), Gaps = 2/274 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L++R+ L+ +K++A+Y++ + +S Q LA E VS +++++ KLGY+G Sbjct: 2 IDLKLREARDSLSTKEKQVAEYIIANKKNMQSMSIQSLAQENKVSTTTILRLCHKLGYQG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK+ L ++ + S + I +D + V K+ +++ T + + Sbjct: 62 FSDLKIDLISSINHK--SYGTLLQEDIDINDSMETVNHKVGLIEKSSIEETCALVNLNAF 119 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 ++ +++I++ G G+SGLVA+ F ++L+KI + D + V +DL Sbjct: 120 KLANELISKSKKIVIYGAGSSGLVAKEFEYQLIKIKKDVNCHLDYSIQFSIVNTLDQNDL 179 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ IS++G E + +AIT +++ A L+TI+ E + I Sbjct: 180 VIVISHSGENHECIKLLTLARELKVPTIAITKMGQSSVSSLAETVLHTISTEHVSRLIPI 239 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + +Q + ++L L + + ++ + A Sbjct: 240 RSKISQLTVINMLITNLFIKQYDERIQKQISTRA 273 >UniRef50_Q02YU6 Transcriptional regulator n=4 Tax=Lactobacillales RepID=Q02YU6_LACLS Length = 273 Score = 237 bits (605), Expect = 4e-61, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 119/278 (42%), Gaps = 15/278 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I+++Y+ L +S+KK+A+Y+L + + + + V +++V+F QKLGY Sbjct: 1 MKIETVIKEKYELLTKSEKKIANYVLASKERIVYGTMNDIKKAIKVGDATIVRFCQKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+ +++ SQ S + ++ ++ T + E Sbjct: 61 SGFSDLKIEVAKESYSQKSSNRTDLTLFFDENE----------NSIIEILHETKSKLDLE 110 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + ++ A I + G+G SG A++ ++IG A+ H L T Sbjct: 111 QFEKSSKLISEASAIYIFGVGLSGNTAKDLEAMFLRIGVPVKAISGSHFQLQTAALLKKT 170 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++ IS +G EL + +++ IT + L Q + L T E+ + Sbjct: 171 DLIIGISLSGKTLELFESIKIAKEQKAQIITITSSDYSPLAQLSDINLQT-VNEEFFDGG 229 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 S++ +Q + ++L ++ L ++ S + Sbjct: 230 SLTGKISQLYICEIL----VKNHERLYKDKSIQSREAI 263 >UniRef50_UPI0001BCD92E RpiR family transcriptional regulator n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCD92E Length = 288 Score = 236 bits (604), Expect = 5e-61, Method: Composition-based stats. Identities = 58/268 (21%), Positives = 124/268 (46%), Gaps = 2/268 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +I Y L ++K+LADY+L ++ LA G S ++VV+F +K G Sbjct: 6 SILEKIFSIYPVLFDAEKRLADYVLQNEAKVVDMTVSDLAAACGTSDATVVRFCKKCGCN 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ +++ +A++P + + + + + + + TL Sbjct: 66 GFHHLKINMAKEMATKPSDGAPIVGSNELDCARMDVSLRNIFASKQEELRQTLAEIDPAV 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 V +R+AR I +G + VA + A+K ++G A + +LA + ++PDD Sbjct: 126 FRSVVERIRAARFIFCAAMGNTIPVAMDAAYKFNELGLTAISAPVWENMLAMMHTATPDD 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA-TNSA 240 +LLAIS +G ++L G ++ +T +++ + + L+ +++E+ + Sbjct: 186 VLLAISASGETKDLMRIVSAARGRGAYIVLVTNQVHSSIARVSDRVLHAVSQERMFFRTF 245 Query: 241 SISA-CHAQGMLTDLLFIALIQQDLELA 267 S S+ + + + ++ L+ + + Sbjct: 246 SFSSTRLSMTAVIEAVYYMLLSVKRDSS 273 >UniRef50_A6LRG7 Transcriptional regulator, RpiR family n=2 Tax=Firmicutes RepID=A6LRG7_CLOB8 Length = 291 Score = 236 bits (603), Expect = 6e-61, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 130/279 (46%), Gaps = 5/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +I Y+ L +++KK+ADY++ + ++ +LA E+ VS++++V+F +K K Sbjct: 15 SVLDKILCIYKSLHEAEKKIADYIINNKERVIEMTVSELALESSVSEATIVRFCKKCDLK 74 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ +++ + + S + + + ++ + T+++ +E Sbjct: 75 GFYDLKIKIAKEMVNLKSSNISNE----LDSNNIMQSLQNILANKIEELKQTISMMNEGN 130 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + ++ AR + +G + VA + A+K ++G ++ LA + +D Sbjct: 131 IKRILEAIKGARIVQFAAVGNTIPVAMDGAYKFNQLGISSVTNTIWETQLAFSYTLTKED 190 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++ IS +G +EL + ++IT + + ++ + + T E+ Sbjct: 191 VVIVISNSGASKELVALLEIANERQATTISITNHENSPVANKSKYHINTSTREKLFLDEF 250 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + ++ ++L++ L+ +D E A I E + + Sbjct: 251 SFSRVSAMVVIEILYL-LLTRDKEDAYNWISQHEQSIAE 288 >UniRef50_Q1J2N3 Transcriptional regulator, RpiR family n=2 Tax=Deinococcus RepID=Q1J2N3_DEIGD Length = 290 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 70/252 (27%), Positives = 116/252 (46%), Gaps = 5/252 (1%) Query: 20 KLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPE 79 ++ D +L+ P+ L+ +L+ AG S ++VV+ Q LG+ G+ KL LS ALA Sbjct: 28 RVIDQILMDPERFLSLTIAELSEAAGTSDATVVRLVQHLGFGGYQEFKLQLSRALAV--- 84 Query: 80 SPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTG 139 S + D + K+ + A+ TL + E V + AR I L G Sbjct: 85 --SRKADLTVEPQDASVTILRKIFDSSNTALDDTLEHLNLEAFSAAVQAMTLARHIELIG 142 Query: 140 IGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAA 199 +GASG+VA + ++ +++G + A D L+T P D+L+A+S++G R ++ AA Sbjct: 143 MGASGVVALSGQYRGLRLGLSCRASTDPGTFLSTCSLLEPTDVLIAVSFSGTRPQVVQAA 202 Query: 200 DEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIAL 259 + G V+A+TG L + H L A ++ Q + D LF +L Sbjct: 203 RLARQAGAIVVALTGLGRTPLSKVVHHTLTVSAPGDRYRPEGLATQIPQVAILDALFTSL 262 Query: 260 IQQDLELAPERI 271 ER+ Sbjct: 263 HVAQDPYLSERL 274 >UniRef50_UPI00017F2FF2 transcriptional regulator n=1 Tax=Escherichia coli O157:H7 str. EC4024 RepID=UPI00017F2FF2 Length = 285 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 65/276 (23%), Positives = 121/276 (43%), Gaps = 1/276 (0%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 I R L Q++ ++ ++ +S +LA+ V ++S+++F +KLGYKG Sbjct: 9 TLINTRINELTQTEIRIYQFIKNNRMRFIDMSIAKLADAMNVGEASIIRFCKKLGYKGLS 68 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 LK L ++ + + + + + ++L N A+ TL + E+ L Sbjct: 69 ELKTTLRLE-TDTDDTLLSKVTSLDEQTNSMTGIAQQLANNNYFAINETLALQEEQALVR 127 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 L +A ++ GIG S + ++ M+I N A+ D H + D+++ Sbjct: 128 AADYLSNAGQVYFYGIGMSAISVLYAKYRFMRIMANVDALIDNHTMTLNSNNVGKKDVVV 187 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 AIS++G R++ A + G + I+ ++L Q A L T S S + Sbjct: 188 AISHSGETRDVVDALKRVKEKGAVTIVISKLQHSSLSQYADVVLLTGGTSNPYQSDSSTI 247 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 AQ + D+LF AL+ + E+I S ++ K Sbjct: 248 TAAQSFMVDVLFNALLFINRGGNVEKIISSLDIINK 283 >UniRef50_B9NXN7 Bifunctional protein glk n=2 Tax=Rhodobacteraceae RepID=B9NXN7_9RHOB Length = 320 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 116/279 (41%), Gaps = 5/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + + LA ++K+ADY+ + ++ LA VS+ +VV+F + LG + Sbjct: 33 DLIPALHNSQTKLAVQEQKVADYVKDHLNEISSMTIGNLAERCSVSKPTVVRFCRSLGCE 92 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF KL L++ +A + ++ + ++++ A + E+ Sbjct: 93 GFRDFKLRLAQNVAVSAQYLYRNAGDESSDANSA---IDQVLGALFATLDVMRGQIDTER 149 Query: 122 LHECVTMLRSARRIILTGI-GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L E R+I+ GI G S LVAQ + + ++G + V D + L A + Sbjct: 150 LEEARDACLDRRQILFAGIGGGSSLVAQEASNRFFRLGIPSFFVNDSYVLQMRAAALGLE 209 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L +S +G + AA+ G ++IT L + L T E + Sbjct: 210 DVLFLVSASGEADAIVSAAEVANGYGATTISITK-PNTRLSDISKIALLTELPEDSDIYK 268 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ +A + D L + + Q+ + E +R A + Sbjct: 269 PTASRYAHLAIVDALAMTVAQEMTDETKENLRRIRASLT 307 >UniRef50_A9MLD6 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- RepID=A9MLD6_SALAR Length = 293 Score = 234 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 74/282 (26%), Positives = 129/282 (45%), Gaps = 2/282 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + + L ++D K+A Y+L QP ++LA E GVS++++V+F +K+GY Sbjct: 7 NVRVYLANILGSLGETDAKIAGYILQQPGLVVQFPVKKLAQEIGVSEATIVRFCKKVGYG 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G LK L L ++ + S+P I DD V +K+ + T+ + + Sbjct: 67 GLLNLKADLKRELLAEND-LSLPSSPDIFLDDSRNDVAQKIALTIETSARETIGLLDMKI 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V SARR++ G GASGL A K+ ++G ++ A D + + DD Sbjct: 126 VKPVVERFLSARRVMFVGFGASGLAALEARDKMNRLGIDSDAFTDRFTMTLKLANLKRDD 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++A S++G E+ A + G LAIT + L + A+ T E S Sbjct: 186 LVVAFSHSGETPEVVNAFRLAQKKGAYTLAITHSPHSPLNELANTFWLTSGEAGPMQGDS 245 Query: 242 ISACHAQGMLTDLLFIALIQQD-LELAPERIRHSEALVKKLV 282 IS +Q + + L + + + + + E L+K+ + Sbjct: 246 ISTRISQLFIIEFLCTEITRHNLRDSGMTGLSIKEILIKERI 287 >UniRef50_B7UNF1 Predicted transcriptional regulator, RpiR family n=11 Tax=Escherichia RepID=B7UNF1_ECO27 Length = 281 Score = 234 bits (597), Expect = 3e-60, Method: Composition-based stats. Identities = 57/284 (20%), Positives = 118/284 (41%), Gaps = 8/284 (2%) Query: 1 MNGLL---RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQK 57 MN + I+ Y L Q++KK+ADY+L + S +L+ ++ S++++V+ +K Sbjct: 1 MNNITVKSLIQSNYPTLHQAEKKVADYILSHAHEVVNYSVTELSEKSHASEATIVRTCKK 60 Query: 58 LGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 LGY+G+ LK+AL++ + + S + + + L+K+ + + Sbjct: 61 LGYQGYYHLKIALAKEVINPDNS-----YPDNTDFTDITSLATFLLKKQAEDLIQSTQFF 115 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 + E L + +L + I G S +A A+K ++G + + Sbjct: 116 NAEVLESILKLLANCDTIFFFAAGNSNPLAVYGAYKFSQLGLKTVVHVSPEMQINAAYSM 175 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 DL + IS +G + + G K + IT + + L + ++H L T ++ Sbjct: 176 GKRDLAIGISNSGSTNLMVDIFKVVKERGAKSVCITNYIKSPLSKLSTHQLNTAVSDKIF 235 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 A S + D+L + + ++ + E L + Sbjct: 236 FEAFDSTRVPAMGVIDMLVLLFMYKNKAHYEKYRTREEFLGSRF 279 >UniRef50_B9YAK0 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAK0_9FIRM Length = 364 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 57/281 (20%), Positives = 130/281 (46%), Gaps = 2/281 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L +++ + +K + +Y++ P+ ++ + LA E S+S++ +F +K GY Sbjct: 81 MSFFLELQKNHSS-TPVEKSIINYIINHPNEVIEMTMEDLARETYTSRSTISRFCKKNGY 139 Query: 61 KGFPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 +GF +LK+ L+ L + S D + + + ++T ++ T+ N Sbjct: 140 EGFNSLKMQLAIELNLFLKDEMSSSTSLLFEKGDNASSIIDNITSQDTYSIIETVRTNPV 199 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E + + + + R ++ G+ SG++A + + ++G +L + P Sbjct: 200 EHIEKLADKILNCRHVVFLGVQFSGIIAYDAHLRFSRLGIPCKYFNTECDILTYSYFADP 259 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+++ SY+G + AAD + G + ++T N L + + LY + + N+ Sbjct: 260 QDVVIIFSYSGKTAVILEAADHIRGKGTFLASVTKNYNNELLEISDLHLYINSIDDPENN 319 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 S+S+ A L D+++ L+ + + +++ + L KK Sbjct: 320 LSLSSRIAALCLVDMIYAVLVNKKSDNFYDKLMQTNKLYKK 360 >UniRef50_C0X148 RpiR family transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X148_ENTFA Length = 295 Score = 233 bits (596), Expect = 5e-60, Method: Composition-based stats. Identities = 63/280 (22%), Positives = 133/280 (47%), Gaps = 3/280 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RIR + L+ ++KK++DY + ++ + LANE GVSQSSV +F +K+GY G Sbjct: 6 LDQRIRIKKPNLSLTEKKISDYFVHSESLLTQMTLESLANEIGVSQSSVYQFVKKIGYSG 65 Query: 63 FPALKLALSEALASQPESPSVPIHN---QIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 F K+ ++ QP +V N I DD + +K+++ N ++ ++ Sbjct: 66 FQEFKIDIARNSNYQPTFQNVNSVNGADDISPDDDSITIAKKVLQANIYSLSNATQFLTK 125 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E L + ++ SA+ + G G S +VA + K ++ + + D H L+ V + Sbjct: 126 ELLDNVLALMYSAKTLHFFGQGGSSIVAFDSFHKFIRTNYRCNYIFDYHMQLSFVTKLTS 185 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +D + S++G +E A ++ + K++ +TG + + L + + + EE + Sbjct: 186 EDCVFIFSHSGKTKESINLARQVKKTNAKMITLTGNSGSELAGLSDEAIIVVTEEGLFRA 245 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S+++ + + D+L+ + + + + ++ + Sbjct: 246 ESLASRISYLTVMDILYTNTMYHNFDQNADSLKKIRDNIS 285 >UniRef50_C6J2D0 Transcription regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J2D0_9BACL Length = 284 Score = 233 bits (595), Expect = 5e-60, Method: Composition-based stats. Identities = 73/278 (26%), Positives = 133/278 (47%), Gaps = 5/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L ++ + L +S++K A Y+L LS +A++AG S +++ + + LG Sbjct: 5 SVLTQMEAMLEQLPESERKAAQYILTASAEVSGLSIHAVADKAGTSAAAITRLCRSLGLS 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GFP LK+ LS A P P + I + ++ V +K + + A+ + E Sbjct: 65 GFPDLKMRLSVDNAK----PQRPGYYDIERGETIQNVIQKTVSNSLQAIQDMMLHLQPEL 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V R A I + G+GAS +VA + A K +++G A A++D H + A + ++ P Sbjct: 121 IEQVVDSFREASVIHMYGVGASAIVAADAAQKWLRLGKQAFALQDEHLIAAALASAPPGA 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSA 240 L + ISY+G +E+ + G + + ++ F + + + A LYT A E S Sbjct: 181 LFMGISYSGNTKEVLQLFRVAQKYGVRTIGLSRFGNHKVAELADLMLYTPQAPEATLRSG 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + S+ AQ ++ D+LF A E R+ + Sbjct: 241 ASSSRLAQLVMIDILFFAYASTQYEETILRLSQTHEAT 278 >UniRef50_Q5WK55 RpiR family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WK55_BACSK Length = 268 Score = 233 bits (595), Expect = 6e-60, Method: Composition-based stats. Identities = 59/279 (21%), Positives = 130/279 (46%), Gaps = 17/279 (6%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +I+ Y L+ ++K++ADY++ P+ ++ + LA + VS +++ +F +K+G Sbjct: 4 MLQQIQVNYHALSAAEKRIADYVMSAPEELANIHIKDLAAKCSVSVATITRFCRKVGAAN 63 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F K+++ +++ ++ E + ++ A + + + +++ + Sbjct: 64 FVEFKMSVRDSIRTEEEGG---------------ELIAEMESIYKAIIGGSRELINQDDI 108 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + T+L +A RI + GIG+SGL Q ++LM++G D H ++ + D+ Sbjct: 109 VQAATLLENANRIEIYGIGSSGLSGQEMKFRLMRMGMRVDCHIDSHTMVMNASLLTAADV 168 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 +LAIS +G ++ A G V+ +T L + A L + + + + Sbjct: 169 VLAISNSGHTVDIQEAVALAKENGATVILLTNHEHTPLSEMADLLLLSFSPKPFYARGFL 228 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +A + + D L ++ Q+ E A R R + + +L Sbjct: 229 NAQLSIVHVLD-LISLVLAQNEERAKAR-RKTLHALSQL 265 >UniRef50_C3RHA3 Transcriptional regulator n=3 Tax=Bacteria RepID=C3RHA3_9MOLU Length = 288 Score = 232 bits (594), Expect = 7e-60, Method: Composition-based stats. Identities = 67/275 (24%), Positives = 120/275 (43%), Gaps = 2/275 (0%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 RI+ Y L S+KK+ADY+L LS LA E VSQ +V++F + +GY F Sbjct: 8 RIKTIYNILRPSEKKVADYILNYCGKLEDLSMTLLAKEVAVSQPTVMRFVKAIGYDSFKQ 67 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 KL L++ + + + I DD + + K++ T+ + L S + Sbjct: 68 FKLELAKNY-DKENNIDILYGFSINTDDKIMDLPGKIVATATSMLENALKSLSLVNYQKT 126 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 V ++ ++ I + + S VA + KL+ +G + D + + D L + Sbjct: 127 VALINQSQHISIYAVENSMGVAHDLMTKLIYLGKSVTCHSDYYLQSIDASNLTRDSLAIG 186 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 ISY+G + G + +AI F L + L T + +Q +I + Sbjct: 187 ISYSGNSKNTVEVLKIAKDAGAQTIAIVNFENTMLTRYGDIVLST-SNDQFLYGDAIFSR 245 Query: 246 HAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 AQ L D++++ +I D + +++ H L+K Sbjct: 246 TAQIALVDMIYMGVIISDYDNYTKKLDHYSRLIKH 280 >UniRef50_P46117 Uncharacterized HTH-type transcriptional regulator in aarA 3'region n=5 Tax=Enterobacteriaceae RepID=YARA_PROST Length = 282 Score = 232 bits (594), Expect = 7e-60, Method: Composition-based stats. Identities = 62/282 (21%), Positives = 126/282 (44%), Gaps = 4/282 (1%) Query: 1 MNGLL-RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M+ L ++ ++++LA +LL D ++ +LA AGVS +SV++F +++G Sbjct: 3 MSTLTSKLESLLNRGKGTEQRLARFLLDSRDNFVAMNVAELAQAAGVSSASVIRFTRQMG 62 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 Y+G+ K+ L+ + + + + + D + K + A+ +L + Sbjct: 63 YRGYSDFKVD---YLSDEKQYKAESLSGSLNPYDDTEQIIAKSGQMFITAIEKSLELLDP 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + E + A+RI+L G+G S +VA + +KL+++ A D+H L+ Sbjct: 120 NTMDEIAQKIVEAKRIVLFGVGTSAIVAYDIFYKLIRVNKYALFSPDLHVQLSYSSNVDA 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DDL++AI+ G ++N + G + +T F + + A L +EQ + Sbjct: 180 DDLVIAITAKGNTPDINHMLKLANKKGCSTIVLTRFGQDEAVRLADLVLPYFYDEQLFQT 239 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 I+ Q ++ D LF + E ++ + +L Sbjct: 240 GVITPQVLQMVVFDTLFFKYLTLTNEDVVLALQKEREAIIQL 281 >UniRef50_B7RLA4 Transcriptional regulator, RpiR family n=1 Tax=Roseobacter sp. GAI101 RepID=B7RLA4_9RHOB Length = 317 Score = 232 bits (593), Expect = 9e-60, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 108/279 (38%), Gaps = 5/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + +R+ LA ++K+A+Y+ + ++ +LA VS +V++F + LG Sbjct: 30 DVISALRRHDGHLATQEQKVANYVKAHLEDISAMTIAELAGHCDVSTPTVIRFCRTLGCD 89 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF KL L++ LA + S + D +++ A+ E Sbjct: 90 GFREFKLRLAQNLAVSMQYLSADPQPEPADGDTA---INQILGGIYASANVMRRQIDPEV 146 Query: 122 LHECVTMLRSARRIILTGI-GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + L R ++ GI G S V+Q A + ++G + + D + L Sbjct: 147 LDRAKSALLKTRHLLFAGIGGGSSNVSQEAANRFFRLGIPSFSTSDSYILQMRAATLQAG 206 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L IS +G + AA+ G + IT L + + E Sbjct: 207 DVLFLISASGEADAIVGAAEIAGGYGATTICITKSG-TRLANVCNIPILIDLPEDRDIHK 265 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ + ++ D L +++ Q E +R A + Sbjct: 266 PTASRYIHMIIVDALAMSVAQDLAHETTENLRRIRASLT 304 >UniRef50_B5GNW3 RpiR-family transcriptional regulator n=14 Tax=Streptomyces RepID=B5GNW3_STRCL Length = 354 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 78/275 (28%), Positives = 127/275 (46%), Gaps = 1/275 (0%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 ++R + +S +++A+ + P L+ LA G S+++VV+ A+ LGY G+ Sbjct: 70 SKVRTLVPSMTRSMQRVAEAVADDPAGCAALTVTGLAERTGTSEATVVRTARLLGYPGYR 129 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 L+LAL+ A Q S + I DDPL V KL ++ + T L Sbjct: 130 DLRLALAGLAAHQQSGRSPSVTADISVDDPLPDVVAKLARDEQQTLADTAATLDTAALAA 189 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 V+ +ARRI + G+GAS LV + A KL++IG A A D H + D+ + Sbjct: 190 AVSAAATARRIDIYGVGASSLVGLDLAQKLLRIGLIAHAHTDPHLAVTNAVQLRTGDVAV 249 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSASIS 243 AI+++G ++ G +AITG + Q A H L T + E A++S Sbjct: 250 AITHSGSTGDVIEPLRAAFERGATTIAITGRADGPVTQYADHVLTTSTSRESELRPAAMS 309 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + Q ++ D LFI + Q+ A + S + Sbjct: 310 SRTGQLLVVDCLFIGVAQRTYASAAPALAASYEAL 344 >UniRef50_Q28KP3 Transcriptional regulator, RpiR family n=6 Tax=Alphaproteobacteria RepID=Q28KP3_JANSC Length = 306 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 86/247 (34%), Positives = 139/247 (56%), Gaps = 1/247 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L ++ + L+ D+++AD +L PD LSS +LA AG SQSSVVKF QKLG+ Sbjct: 27 SILTIMQAQLPTLSAGDRQIADTILGDPDRMARLSSGELARAAGRSQSSVVKFCQKLGFS 86 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ L+LA++ A A+Q +P+ +H+ I D + +KL+ A+ TL++N + Sbjct: 87 GYQDLRLAVTRAAATQK-APNDAVHSSIEVSDDASMTAQKLLASKIHALQETLSINPAKN 145 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L L A R+ L+G+GAS LVA++F +KL K+G + D H +A +PDD Sbjct: 146 LDAARDALNGAARVQLSGVGASSLVARDFVYKLQKLGISVLFDADSHIQMAHSATLTPDD 205 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L+++S +G E A+ + G ++ +TG PN L A L T+ +E S++ Sbjct: 206 VLVSLSQSGFSLETLRIAEAAAKRGATIITVTGLHPNPLADVADKALCTVTDEDQVRSSA 265 Query: 242 ISACHAQ 248 I++ AQ Sbjct: 266 ITSRDAQ 272 >UniRef50_D1AK74 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AK74_SEBTE Length = 284 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 69/276 (25%), Positives = 135/276 (48%), Gaps = 6/276 (2%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 +++ Y L +S+KK+A++++ + + ++S ++ + V Q++V++F++KLGY F Sbjct: 13 KLKSVYNDLTKSEKKIANFIMKNFEKTKTMTSYDISKKVNVGQATVIRFSKKLGYSSFNE 72 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 L ++ + I D + K+ + + TL +N E Sbjct: 73 LINSI------NKLDQEDILEKNISLGDDIATTNTKIANQYIDVIKLTLELNPVYVFEEV 126 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 + + +A RI++ GIG S +V+ +F KL ++G NA D H + + +DLL+ Sbjct: 127 IEAIIAAERIVVLGIGNSAIVSTDFVNKLARVGMNAFTNLDTHLQFSMISNLGKNDLLIL 186 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 IS +G RE+ AA + ++++IT FT N L + L T + + + ++ Sbjct: 187 ISDSGETREIIEAAKLAKQNKTRIISITKFTKNKLHAYSDFILKTASFDINLRLDATTSR 246 Query: 246 HAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 Q + D++FI +++ D E I +S+ VK L Sbjct: 247 ITQFTIIDMIFINILKTDFSKYKEIITNSDNAVKLL 282 >UniRef50_D0RS60 RpiR family transcriptional regulator n=2 Tax=Lactobacillales RepID=D0RS60_9STRE Length = 277 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 120/279 (43%), Gaps = 14/279 (5%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L I Y L +KK+ADY L LS+Q ++ VS S+ +FA+K G+ Sbjct: 4 NILPVIESVYGSLTHLEKKIADYFLSAEALTADLSAQAVSQRLYVSVPSLTRFAKKCGFS 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ E+ + R + ++ + + T ++ EE+ Sbjct: 64 GYRQFIFEFQESSSESKNVS--------------RDLTRNVLSDYGELLNKTFSLIDEEQ 109 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 ML +A R+ + G G+SGLVA+ ++ M++G A+ D H + +PD Sbjct: 110 FLRVGDMLNNAGRVYIYGQGSSGLVAREMEFRFMRLGMVCKAITDDHMIRMNRVMLNPDC 169 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++ IS +G + + A +VG K + +T + L+Q+ + ++ + Sbjct: 170 LVIGISISGETKIITQAIQNAKKVGAKTVLVTSNNSDDLRQQCDELVLVAVKKHLAQGNN 229 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 IS ++ D+ + + D + + ++ + +++ Sbjct: 230 ISPQFPVLVVMDIFYAYYMDLDRDHRSQIFTNTLSALEE 268 >UniRef50_P0ACS8 HTH-type transcriptional regulator rpiR n=34 Tax=Gammaproteobacteria RepID=RPIR_ECOL6 Length = 296 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 54/273 (19%), Positives = 130/273 (47%), Gaps = 4/273 (1%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 +R + +G+ +++ ++ ++LL + + + + +A VS++ +VK ++ LG+ GF L Sbjct: 20 LRMKQEGMTENESRIVEWLLKPGNLSCAPAIKDVAEALAVSEAMIVKVSKLLGFSGFRNL 79 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 + AL + + + + +++ D+ + V K+ + ++ + +++H Sbjct: 80 RSALEDYFSQSEQV----LPSELAFDEAPQDVVNKVFNITLRTIMEGQSIVNVDEIHRAA 135 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 AR+ L G G S + + K ++IG A D H ++ + D++L + Sbjct: 136 RFFYQARQRDLYGAGGSNAICADVQHKFLRIGVRCQAYPDAHIMMMSASLLQEGDVVLVV 195 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 +++G ++ A + + G K++ IT + + + A + + + A E + SA Sbjct: 196 THSGRTSDVKAAVELAKKNGAKIICITHSYHSPIAKLADYIICSPAPETPLLGRNASARI 255 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 Q L D F+++ Q ++E A ++ + A+V Sbjct: 256 LQLTLLDAFFVSVAQLNIEQANINMQKTGAIVD 288 >UniRef50_B7C842 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C842_9FIRM Length = 276 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 122/279 (43%), Gaps = 6/279 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L I Y S+KK+ADY++ P +++ +QLA SQ+SV +FA+K Sbjct: 2 ILDTIHGHYNSFFDSEKKIADYIIQHPKEVVNMTIKQLAQACNTSQASVSRFARKCQMDS 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK+ L+ ++ E S I + E ++ + + AT+ ++ Sbjct: 62 FHHLKVNLARDCVNEIEQKSNTI-----STSDISGSLETILSNKISELTATIRNIDVDQF 116 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 ++++++A+ +++ +G + VA + +K +IG ++ +D+ Sbjct: 117 SVILSLIQNAKHVLVCAVGNTVPVALDCMFKFNEIGILTFTSTIWENQVSYALGLDSNDV 176 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++AIS +G ++ EM + G + IT + + + + + T E+ + Sbjct: 177 VIAISNSGESSQVLAVCKEMKKRGVPTIGITNNEDSVVAKECVYHIQTSTREKLFLNEFC 236 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + + ++L++ L + + +RI E L L Sbjct: 237 FSRISAATIIEILYLFLTNA-SDNSYDRISQCEELYASL 274 >UniRef50_D1AYR1 Transcriptional regulator, RpiR family n=2 Tax=Fusobacteriaceae RepID=D1AYR1_STRM9 Length = 281 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 63/275 (22%), Positives = 139/275 (50%), Gaps = 1/275 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L+++R+ S+K +A +L+ + + ++++A E S S+V + +K+G Sbjct: 1 MSILVKLREN-NDFTSSEKDIAKFLMNNYKNIKKIDARKIAKETFTSVSAVTRTCKKIGL 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GF K+ L E LA+ + +++ I ++ R++ EKL K + +++ T + + Sbjct: 60 RGFQEFKIDLIEELANLEQQKLEFVNSDIERNNDTRMIIEKLNKLSISSLKETKLLQDPD 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + V +++ + I GIGAS +V + +K M+IG A S+ D Sbjct: 120 IIDKVVKLIKKKKVIDFYGIGASHIVCLDAQYKFMRIGKVCNAFGPFDLQYIQAVNSTDD 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +L + ISY+G+ ++ ++ + G + ++IT + N + A+H LY ++E SA Sbjct: 180 NLAIIISYSGMTEDIIKISEVLRNKGIETVSITMYGSNKVASNANHNLYVTSKESLKRSA 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 +I + + L D++++ + + +I ++ Sbjct: 240 AIYSRISMLNLIDVIYLKYSNMNFDEVSVKINETQ 274 >UniRef50_UPI00016A71F3 transcriptional regulator, RpiR family protein n=1 Tax=Burkholderia oklahomensis EO147 RepID=UPI00016A71F3 Length = 300 Score = 229 bits (586), Expect = 6e-59, Method: Composition-based stats. Identities = 62/279 (22%), Positives = 115/279 (41%), Gaps = 6/279 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + I R LA + + +A L +P+ A ++A AGVS+ +VV+F + LG+ Sbjct: 11 DLFSLIHARLPDLAAAQRLVAKVFLDKPEWAMQAHVNEIAVFAGVSEPTVVRFCRALGFH 70 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G KL +++ +A SV +H + D + + K+++ + + E+ Sbjct: 71 GLRDFKLRVAQQVAL----GSVALHRNVTAVDSIDEIVGKVLRSSADILLDIERQLPREQ 126 Query: 122 LHECVTMLRSARRIILTGIG-ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + ++ L SA R+ G+G SG VA + +L + G A D + + + SP Sbjct: 127 IKRAISALGSAHRVDCYGVGTTSGFVAADAQARLFRFGIQAQTYTDANMQMFSAATLSPG 186 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D ++A+S+ G L A G V+ I L L Sbjct: 187 DGVIAVSHFGRMPFLLEAVRVARERGAVVIGI-CEPGTPLAGECDIPLTFALPASVNAYI 245 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 AC A + D+L + + + E++R + ++ Sbjct: 246 GSDACIAHLAIIDILIVGVAFERGAAGIEQLRRLQNVLS 284 >UniRef50_C3RI81 Sugar isomerase n=1 Tax=Mollicutes bacterium D7 RepID=C3RI81_9MOLU Length = 296 Score = 229 bits (585), Expect = 7e-59, Method: Composition-based stats. Identities = 53/283 (18%), Positives = 116/283 (40%), Gaps = 3/283 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + ++ + ++ ++ +A ++L S++ +A S ++V++ +KL + Sbjct: 1 MLIIEKLN-LKEKMSDGEESIAAFILTLGKELHKYSTRNIAEATLTSPATVIRLCKKLDF 59 Query: 61 KGFPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 KGF K + + + V + +D + K+ + T+ + Sbjct: 60 KGFDDFKEQFLKEINYLDQQYGKVDANFPFNRNDTMMKTAHKISHLYEDTVTDTMTLLHH 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L + + +L+++ I + G + +A++F K++KIG N +++ L V Sbjct: 120 DDLQKALRLLKNSNSIHIFSTGTALNLAESFKEKMLKIGKNVVISNNLNYQLYEVSCIPK 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-N 238 D+ + ISY+G A ++AIT F N L + AS L +E N Sbjct: 180 GDIAIIISYSGETINTIKIAQTCKNNKIPIIAITSFGENTLAKLASCKLTISTKESLYHN 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S A ++ D+L+ +D + + ++ L Sbjct: 240 LGDFSTHLATHLMLDILYSVFFLEDYDQNYDNKIKITKDLEAL 282 >UniRef50_C3RM35 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RM35_9MOLU Length = 284 Score = 229 bits (585), Expect = 7e-59, Method: Composition-based stats. Identities = 61/271 (22%), Positives = 126/271 (46%), Gaps = 2/271 (0%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 + ++ L Y+L + ++S+++LA S +S+V+F +KL Y+G+ K+AL+ Sbjct: 3 NNFSSVERILGKYVLENGEKVLNMSTKELAKATFTSPASIVRFCRKLEYEGYNDFKIALA 62 Query: 72 EALA-SQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 L S+ + + + +G D + V + + ++ T+ E+L V M+ Sbjct: 63 AQLQYSRLSNDDINANYPFKGTDSVYTVASNIANLSKESIDITMKNLDLEELRLVVLMIT 122 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 A+ I + G+ +A +F +K+ +IG + + ++ L S+ + L + ISY+G Sbjct: 123 KAKVIDIYGVSGPLRIASDFQYKMFRIGKDVRISQMINEQLFQAAQSTSEHLAILISYSG 182 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-NSASISACHAQG 249 E+ AA + R +AIT F N L + LY + E A+ S+ + Sbjct: 183 ETEEVIEAAKILYRRKIPAIAITSFGENRLVKYTQRVLYLNSSEFIYSKIATFSSTLSLH 242 Query: 250 MLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +L D+++ + ++ E ++ L+ Sbjct: 243 LLLDIIYGCVFSKNYEDNLNYKIETDNLIDH 273 >UniRef50_C0X6G8 RpiR family transcriptional regulator n=23 Tax=Enterococcus RepID=C0X6G8_ENTFA Length = 283 Score = 229 bits (585), Expect = 9e-59, Method: Composition-based stats. Identities = 68/282 (24%), Positives = 133/282 (47%), Gaps = 3/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + IRQ+Y+ ++ +K++ADY+L P L++ ++A+ + S +SV +F+++LG+ Sbjct: 1 MEPIRSIRQKYKDFSKVNKRIADYILKDPTRLLSLTANEIASNSETSPASVTRFSKQLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + LKL+++ + I + DD + + K+ A + ++ Sbjct: 61 DSWEELKLSIAA--VQAASNGKKDIDPIVAADDSVDTICMKVESLLNATIEDLFYTVDKQ 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + ++ A +I L GIGAS L N K + G A D H +L + ++ Sbjct: 119 ALERAIAHVKKAEKIHLVGIGASSLTTYNLYHKFNRAGRQAIFNYDSHMMLEFLNYATAQ 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L+ +SY+G+ +E +A + G V+ IT ++ + L E Sbjct: 179 DILITVSYSGLTKEALIACEIAKNRGATVIFITSNDGENVRSLSDEVLLVPNNEHLIRVG 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLE-LAPERIRHSEALVKKL 281 +IS+ + + D+L++ IQ DL+ + + LV +L Sbjct: 239 AISSIASSMAIGDVLYLGSIQDDLDTEIERNMIETSQLVSRL 280 >UniRef50_C7HWK5 RpiR family phosphosugar-binding transcriptional regulator n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HWK5_9FIRM Length = 297 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 50/273 (18%), Positives = 118/273 (43%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I + +++ A+Y L D + + +A E S +S+ KF +KLG+KG+ Sbjct: 21 ILSKKSTFTKTENFYAEYFLKLDDEILNKTISNVAEETESSTASIFKFIKKLGFKGYKDF 80 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 +L L+ + + + + +D + K++ N +MY C+ Sbjct: 81 QLNLATNINKNSDDSLLTAITSVNENDSPDEIANKIMAFNIQSMYTLKEDIKNIPFESCL 140 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 +++ +++I G+G S +A + K ++ + + D H L+ +D + Sbjct: 141 NLIKKSKKIHFFGMGGSATIAYDSYHKFLRTKYMVNYISDSHMQLSACTKMDQNDCIFVF 200 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S++G E+ + + K++A+TG + + + + + + E + S++A Sbjct: 201 SHSGRTLEVIEVSKVAKKNKAKIIALTGNPKSEMVKISDEAMILPSIESEHGTESLNARI 260 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + D+L I+L+ ++E + ++ +K Sbjct: 261 LYLTVMDILLISLMYDNVEENKKYMKKRLDALK 293 >UniRef50_A3DDB2 Transcriptional regulator, RpiR family n=5 Tax=Clostridiales RepID=A3DDB2_CLOTH Length = 299 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 58/281 (20%), Positives = 125/281 (44%), Gaps = 8/281 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L RI+ G ++ K +A++++ D A ++++ +L E GVS+S+VV+FA ++G+ Sbjct: 8 DLLKRIQAGMPGFSKGQKLIANFIINHYDKAAYMTAAKLGEEVGVSESTVVRFANEIGFD 67 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L+ L E S+ + R ++ + + +++ + + ATL +E Sbjct: 68 GYPKLQKVLREMNKSKLTAVQRIEVTSSRINEG--NILKSVLQSDMEKIKATLEEIDQES 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAV--RDMHALLATVQASSP 179 + V + +AR+I + G+ +S +A + I N V + + + +S Sbjct: 126 FNNIVKSILNARKIYILGVRSSAPLASFLGFYFNLIFDNVRLVHTTSVSEMFEQIIHASR 185 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+++ IS+ + A G V+AIT + L + A H + ++ + Sbjct: 186 GDVVIGISFPRYSKRTINAMRFAQNQGATVVAITDSLYSPLAKNADHVITARSDMASF-- 243 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + A + + L +A+ E E + + Sbjct: 244 --VDSLVAPLSVINALIVAIGMSRKPHVQETFERLEKIWDE 282 >UniRef50_C4FU45 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FU45_9FIRM Length = 277 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 57/284 (20%), Positives = 127/284 (44%), Gaps = 17/284 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L RI + L+ ++ LA Y++ + +++ ++A E GVS +++ +F +K+G Sbjct: 1 MGVLERIEANFVHLSPKEQLLATYIMQESPYFTNITISEMAKETGVSAATITRFCRKVGC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + F LK+ L + + + + + + + T + SE Sbjct: 61 ESFVDLKIQLQASEGESASNHQN------------HDMFDTVSEFYNRIIQRTSELQSEY 108 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L + + +L A RI++ G+G+SGL A+ A +L ++G A + D H ++ + + Sbjct: 109 QLRQLIQVLSQANRIMVYGMGSSGLTARELAIRLSRMGLPATSETDSHMMIISSTVTRSS 168 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++AIS +G +++ A + G ++AIT ++L + A L + Sbjct: 169 DVVIAISNSGETKDVIDALGNAKQNGAILVAITSMKGSSLAKLADETLLVHNSRFVNSEF 228 Query: 241 SISACHAQGMLTDLLFIA-----LIQQDLELAPERIRHSEALVK 279 ++ L D + + + Q+++ + I ++ Sbjct: 229 FVNTQLPIFFLIDAITLMMLENPVFSQNMQKTIQEITSINQKLQ 272 >UniRef50_D2BPE4 Transcriptional regulator, RpiR family n=1 Tax=Lactococcus lactis subsp. lactis KF147 RepID=D2BPE4_LACLK Length = 273 Score = 227 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 53/280 (18%), Positives = 123/280 (43%), Gaps = 10/280 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L +I+ +Q +S+KK+A+++L P + LA + VS++S+ +F +KL Sbjct: 1 MNILDQIQVNFQNFFESEKKIAEFILKNPKKVIDMPIALLARNSNVSEASISRFCKKLNL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+ L+ + ++ + L + + + K T + A + + Sbjct: 61 TGFHQLKIELAR--------IQDNENIKVNKNTSLNELIKNISKIKTTELIAATDNLDID 112 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + ++ + + G + VA++ +++ ++G + D A + Sbjct: 113 NLQSIIKIITNVKLTHFVASGNTIPVAEDASYRFNQLGITSVVFDDWQVQTAFTLNMRKE 172 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DLL+ IS +G + L + +++IT + + + ++ L + + + ++ Sbjct: 173 DLLIVISNSGESKSLIKLINIAKEKKIPIISITNHPDSPIARLSNFHLTSFSRDYFFHND 232 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + L +L+F+ L Q + E I+ E ++ + Sbjct: 233 YYFSRLSAMYLIELIFLILSQD--KSRLENIKLHEQIISE 270 >UniRef50_C2KD15 RpiR family transcriptional regulator n=3 Tax=Lactobacillus crispatus RepID=C2KD15_9LACO Length = 279 Score = 227 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 124/264 (46%), Gaps = 7/264 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L ++ R L Q ++K+A ++L P + + QLA+ VS +++ +FA+++ Sbjct: 1 MTFLTDLQNRLPDLPQQERKIALFILQDPQFIQSANINQLASTIKVSNATITRFARRVNC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F LK+ L+ A AS N I D + ++ + T N + Sbjct: 61 SSFTDLKVKLAAAAASSQV-------NTITNQDNSKTTAHQVYDFYNRVLSETQNKLDIK 113 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L + + +++SA+R+ GIG+SG + +L+++G +A A + + + T S D Sbjct: 114 QLKKIIQLIKSAKRVYFYGIGSSGYTSLEATQRLLRMGISAFAETESNNMFMTSSIISKD 173 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++AIS TG L A + + V+A+T + + L Q A + ++ Sbjct: 174 DLIIAISSTGSTDSLVRAIELAKKNKATVVALTSYDNSPLAQLADIVVGVQDTNYINDAR 233 Query: 241 SISACHAQGMLTDLLFIALIQQDL 264 I++ + + D++ L++ + Sbjct: 234 FINSQFSIMYVIDVITTLLLKNNK 257 >UniRef50_B7CB00 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CB00_9FIRM Length = 291 Score = 227 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 51/281 (18%), Positives = 116/281 (41%), Gaps = 4/281 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + RI ++ + +K +ADYLL +++S LA S S++ +F KLG G Sbjct: 2 IIERIIKQ-EEFTDVEKSIADYLLKNGYEVKNMSISSLAQVTYSSTSTITRFCHKLGLDG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + ++ + + + V ++ G+D + ++L + N + T++ + +L Sbjct: 61 YKKFQILFNSEYEAYEKKGLVNVNYPFTGEDSYEQIAKQLERLNQETIAKTISCFNYNQL 120 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V + A I + +G S VA F K+++ G + L A + + + Sbjct: 121 NRIVRRMDKADMINIFSVGTSVTVAMEFQQKMLRFGKIVNLTQQACFLPGYALAGTENTV 180 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ---ATNS 239 L IS +G R++ + + + G + +T + + + + EE Sbjct: 181 NLVISLSGENRDVVESLNLLKEQGRYTVGMTSTPNSTVARECKEVILVDIEENNSYEAKI 240 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + A + D LF L + + + + + ++++ Sbjct: 241 DTFAIYSAFHFVLDCLFSFLYKYNFDSNTKITKEKAYMIER 281 >UniRef50_B6GAC9 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GAC9_9ACTN Length = 270 Score = 227 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 60/284 (21%), Positives = 119/284 (41%), Gaps = 17/284 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDT-ARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M+ + +I +++ +A ++L + L+ E GV ++++V+F +KLG Sbjct: 1 MSIIGKIESCLPSFTKTETIIARFILDHREDGVEQYLLGDLSRELGVGEATIVRFCRKLG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 GF LK LS + + +++ T ++ S Sbjct: 61 LGGFTELKFLLSVENEEHTAARENSGE---------------IKDILISSIKMTDSMVSS 105 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + + + V + +A + GIG SGL A +L + G A+ + HA Sbjct: 106 KDISDVVDLAGAASEVFFFGIGMSGLSASMGESRLFRFGKRTKAITEAHAQNMQASLCDE 165 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 + L++A+S +G +L A G KV+AIT + + L + A + L + + N+ Sbjct: 166 NSLIVAVSISGETIDLIEAVSLAKESGAKVVAITSYLRSTLAELADYVLLSFGKPNYINA 225 Query: 240 ASISACHAQGMLTDLLFIALIQQ-DLELAPERIRHSEALVKKLV 282 + S +Q + DL+ + E A + R + +++ K+V Sbjct: 226 GAFSTVVSQLYILDLITSEYALRFSAEAARSKKRIARSIINKMV 269 >UniRef50_Q71VW8 Phosphosugar-binding transcriptional regulator, RpiR family n=15 Tax=Firmicutes RepID=Q71VW8_LISMF Length = 268 Score = 227 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 123/279 (44%), Gaps = 15/279 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L I+Q Y L +K++A Y+L + D ++++ ++LA E G S S++ +F + + Sbjct: 1 MTILNEIQQNYNRLPNKEKQIAKYILEKSDELKNINIKELAEETGTSISTITRFCRHVRC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F LK+ V + + E++ + T+ + Sbjct: 61 DSFVDLKMR-------------VNTAATMVPSLGYDDLFEEVYSFYHKVIDNTVKLIEPA 107 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 K+ E V ++ A+R+ + G+G+SGL A + +L+++G N +V D H ++ T ++ + Sbjct: 108 KIREVVQYIQEAKRVYICGVGSSGLTAVEMSQRLIRMGLNVISVNDPHMMIITSSITTKE 167 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D ++ IS +G EL A + KV T F + + + + + + Sbjct: 168 DFVIGISNSGNTPELVTALKIAKKNKSKVATFTSFENSEMTEISDVTIPVYNTLFVSKRY 227 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ + + D++ + L+Q E + + + V Sbjct: 228 FANSQFSIMYVMDIISMMLLQN--ESYRDNMEKTINTVT 264 >UniRef50_C8P0W4 RpiR family phosphosugar-binding transcriptional regulator n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P0W4_ERYRH Length = 285 Score = 227 bits (579), Expect = 4e-58, Method: Composition-based stats. Identities = 63/282 (22%), Positives = 116/282 (41%), Gaps = 3/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + RI+ L+ ++ K+A Y+L P L+ +L+ S S++ +F +K+ Sbjct: 1 MLLINRIKNS-TQLSDTESKIAQYILENPQLVTQLTIHELSEITYASASTITRFCRKMKT 59 Query: 61 KGFPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 +GF K+ L+ L+S + + + + + ++ N +M T N Sbjct: 60 EGFSDFKVKLAGELSSFSITENRIRDDVPFQSNHTSTEIVQSILSLNYQSMSDTYNNIDL 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E+L + A I L G G S ++AQ+F +KL +I + + Sbjct: 120 EQLERIAHKIYYAPHIYLYGSGQSLILAQDFQYKLFRIELDCNLETSLGFQSLKANTQPL 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-N 238 D + L ISY G D ++ + ITG N L AS ++ +E+ Sbjct: 180 DSIALIISYYGQNEHNKTIVDSLVERNIPYILITGPLNNPLCTHASEVVHVSPQEELVTK 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 AS S+ + ++ D ++ + D E + I +KK Sbjct: 240 MASFSSRTSMQLVLDFIYALIFAIDYEKNQKIIEKHPWYIKK 281 >UniRef50_Q03FC5 Transcriptional regulator n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03FC5_PEDPA Length = 280 Score = 227 bits (579), Expect = 4e-58, Method: Composition-based stats. Identities = 60/281 (21%), Positives = 136/281 (48%), Gaps = 9/281 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L + ++ ++S++K+A +++ P ++++++++ VS ++VV+ A+K+ Sbjct: 3 NILFTLSNDFEKFSRSEQKVARFMIDYPREVIQMNAEEISDRTQVSPATVVRLAKKICKS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G P LK+ ++ + ++ ++ D L ++ KL + A+ T + + Sbjct: 63 GLPGLKIQVASEIK-----VDDSLYTEVNPSDDLDVMKHKLEFRISHAIGQTNQILLKND 117 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + ++ A I + G+GAS LVA++F K ++IG + D H L V + P+ Sbjct: 118 VKKATDIVEQADDIYVFGMGASNLVAEDFQQKFIRIGKSVIQTLDTH--LMAVGLAKPNS 175 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI--AEEQATNS 239 +L+ +S +G +E + ++AIT + + + ++ L E + Sbjct: 176 VLIVVSDSGETKESCHITRVASSLNIPIIAITHERNSTIAKNSTVTLTHDDGGESGVLRT 235 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A+ ++ AQ + DLL+ A + QD R+ S+ ++ + Sbjct: 236 AATTSLLAQLYVVDLLYYAYLTQDFSNNKARLVKSKTIIAE 276 >UniRef50_A8UCF8 Phosphosugar-binding transcriptional regulator, RpiR family protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8UCF8_9LACT Length = 283 Score = 226 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 67/279 (24%), Positives = 138/279 (49%), Gaps = 4/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L RI+ L S++K+ +Y+L P+ +++ QL A + ++V++ ++G Sbjct: 5 NILGRIKSVLDDLPNSERKIGEYILTYPEETIKMTTSQLGIAAESNSTAVIRLCNRIGVN 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ LS + S ES + +I ++ + + KL+ +M T+++ +E Sbjct: 65 GFTKLKVNLSAEIVSVDESG----YAEIEAEETIGTIKNKLLTNAFKSMEETISLMNEFD 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + ++ SA + + G+G S ++A+N K ++G D H L++ + A+ + Sbjct: 121 IERVIELIESASMVYVYGVGNSRIIAENMVQKWSRVGKIVICPTDNHQLVSMLGAAPKNA 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L IS +G RE+ + K + +T F N+L +A + + T+ ++ + Sbjct: 181 LFFGISNSGETREIIELIKLAKKCSLKTVGLTQFGQNSLTNKADYTIQTVKTIESDSQFI 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 S+ HAQ + D+LF + + ++ ERI+ S + + Sbjct: 241 SSSLHAQLIAIDVLFYSFLSKNYVAGTERIKQSREEMNQ 279 >UniRef50_Q03HW7 Transcriptional regulator n=13 Tax=Lactobacillales RepID=Q03HW7_PEDPA Length = 295 Score = 226 bits (577), Expect = 7e-58, Method: Composition-based stats. Identities = 57/282 (20%), Positives = 122/282 (43%), Gaps = 3/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + ++ ++ +++++ADY+L ++ +L+ S S+VV+ +KLG+ Sbjct: 1 MLLIDKL-SNHENFTNTEQRIADYILKNITDIPPMNIDKLSKVTYTSHSAVVRLTKKLGF 59 Query: 61 KGFPALKLALSEALASQPES-PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 +GF K+A+SEA+ SQ + SV + +D + + +K+ + + ++ T E Sbjct: 60 EGFKDFKVAISEAVYSQTTNMNSVDANFPFDSNDSVSTISKKVAELSVESIQRTFAQLDE 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + E + + RI L G S + A++F KL+K+ A + T + Sbjct: 120 RLIEEAANTIAKSERIFLFAQGDSQIRARSFQNKLVKLNRFAILGEEYSDEDWTAANLTK 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-N 238 D + ISY G + + +TG + L + A + T E Sbjct: 180 KDCAIFISYGGRISQYERMLTHFSENKIPSVVLTGNQKSPLIRLAQTAIVTTQNEYDFLK 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ S+ L D +F + ++ + +++ L+++ Sbjct: 240 ISTFSSQITFEYLLDTIFSVIYAKEYQQNIINLKNKFNLIQR 281 >UniRef50_A9BEU1 Transcriptional regulator, RpiR family n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BEU1_PETMO Length = 269 Score = 226 bits (577), Expect = 7e-58, Method: Composition-based stats. Identities = 55/265 (20%), Positives = 117/265 (44%), Gaps = 12/265 (4%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 +I+ Y L +K+ A Y++ +P H S +L+N AG S++++ + +K+GY G+ Sbjct: 4 SKIKGIYNSLTNKEKQAAQYIIERPGDVIHYSITELSNWAGTSETTIYRVLKKVGYSGYQ 63 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 KL L+ L++ + + + + A+ L +K+ Sbjct: 64 KFKLELARELSTPTLDSKES-----------KDLFDMIYNRTVNALTDILRQVDRDKITH 112 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 ++ ++++++ +G S +A + + K +GF + A D H + DD+++ Sbjct: 113 ASEIIMNSKKLLFYAVGRSFPIALDASLKFAALGFASTAYSDPHMQVIVASNLEKDDVVI 172 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 AIS++GV R+ +A G + +T + L + + LYT A E S + Sbjct: 173 AISHSGVIRDTYKSAQVAKEAGAFTIGMTAGVNSPLSKIVNLVLYTSA-EMPQESEFTVS 231 Query: 245 CHAQGMLTDLLFIALIQQDLELAPE 269 + + +LL+ ++ + E Sbjct: 232 RIGEMFMVELLYNSVASKMSLKNKE 256 >UniRef50_C6B6F5 Transcriptional regulator, RpiR family n=7 Tax=Alphaproteobacteria RepID=C6B6F5_RHILS Length = 287 Score = 226 bits (576), Expect = 8e-58, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 105/277 (37%), Gaps = 7/277 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ +++ L+ S+ ++A+ ++ + A + S +LA A VS +V +F ++LG Sbjct: 1 MDIFSTLQEDKGRLSPSESRIAEIIVNDFEFAVNASIIELAERAKVSPPTVTRFCRRLGC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + F K+ L+ V V + +I + A++ Sbjct: 61 ESFSDFKVQLAR-----TAHIGVRYLKPESKSTDPADVAQDIITKAQNALFLLHRSLDLA 115 Query: 121 KLHECVTMLRSARRIILTGI-GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + V+ + A I G G S ++A +L ++G A D L A+ P Sbjct: 116 AIEAAVSHIAKADMIYAFGSGGNSSMIADELQNRLFRLGLRITASSDHSMQLMMAAAARP 175 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+L+ S++G EL A + + K +A+T + + + A + E Sbjct: 176 GDVLIGSSFSGRNMELVRAFELARQTKVKTIALTQT-DSPVAKAAEIVVPIDLPEGHNIY 234 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 S A D+L + A +R + Sbjct: 235 RPTSTRIAYIATIDILSSLVAYAVQPKATTTLRRIKQ 271 >UniRef50_C6VMT8 Transcription regulator n=3 Tax=Lactobacillus plantarum RepID=C6VMT8_LACPJ Length = 282 Score = 226 bits (576), Expect = 9e-58, Method: Composition-based stats. Identities = 69/284 (24%), Positives = 128/284 (45%), Gaps = 12/284 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL--- 58 + L I R + +++++K+ Y+L + +S+ +LA GVS ++V +F + L Sbjct: 3 SVLFTIHNRLENFSKAEQKIGRYILDHTNAVIKMSTAELAAATGVSTATVARFGKTLIPD 62 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 G G+PALKL LS + ++++I D L + KL T + T Sbjct: 63 G--GYPALKLRLSAE-----STVDQTLYDEINPKDSLDAIKSKLALRITHTIDETNRSLD 115 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 + L ++ + + G+GAS +VA +F K ++IG +D H L + Sbjct: 116 DAALQAASQLIADKASVYVYGLGASNVVATDFEQKFIRIGKAVIHSQDPHLLAVGMTTQR 175 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE--QA 236 + +LL IS +G + E A+ + V+ ++ + L + A L E Q Sbjct: 176 QNVVLLLISNSGEKSESIRLANLAHSINVPVIVLSRNATSTLGKLADIILINDDSEENQT 235 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +A+ ++ AQ + DLL+ I D E +++ S +K+ Sbjct: 236 ARAAATTSLMAQLYVVDLLYYTFITNDYERHIKQLVASREAIKE 279 >UniRef50_B7X566 Transcriptional regulator, RpiR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X566_COMTE Length = 282 Score = 226 bits (576), Expect = 9e-58, Method: Composition-based stats. Identities = 61/283 (21%), Positives = 123/283 (43%), Gaps = 10/283 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L ++ + L ++K++ ++ P +S+ ++A+E VSQ +VV+F + LGY G Sbjct: 1 MLDQVMATLETLTPAEKRVGKLVIENPRRFASMSTSEIASECFVSQPTVVRFCKGLGYGG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 K L +H+ + D V K++ + A + + + Sbjct: 61 LTQFKQKLRGD----RSDGVPYVHSSVDAGDTSFNVALKVVDSSIATLALFRTYVPKISI 116 Query: 123 HECVTMLRSA----RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 L +A R + G G SG+VAQ+ + ++GFN+ A+ D ++ + + Sbjct: 117 ERASNTLAAAYSEQRSLSFYGSGHSGVVAQDAQLRFSRLGFNSTALNDGYSQVLNAASRK 176 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D+++A+S +G +EL + D R G V+A+TG L S L T E Sbjct: 177 EGDVVVALSCSGRTKELLESVDVAKRQGATVIAVTGSG-TPLATMGSIHLATDHLEDIDR 235 Query: 239 SASISACHAQGMLTDLLFIALIQQDL-ELAPERIRHSEALVKK 280 +S+ ++ D++ A+ Q +++ ++ ++ Sbjct: 236 YLPMSSRLLHLVVIDIVATAVALQIGCGRLQDQLERTQNHLRH 278 >UniRef50_C7XVK6 6-phospho 3-hexuloisomerase n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XVK6_9LACO Length = 280 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 61/274 (22%), Positives = 131/274 (47%), Gaps = 14/274 (5%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 +++ + L + +KK+A L +P+ R ++ +LAN+AGV ++V +F +++G K F Sbjct: 2 EQVQNLFINLPRQEKKVARVTLQKPELVRRMNITELANQAGVGVATVSRFTKRVGCKNFA 61 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 KLAL P++ + + + +K+ + T+ + S ++L + Sbjct: 62 DFKLALV-----TPDTMQRESEQNVSTPNDIHNYYQKI-------LAETMAMVSTKQLRQ 109 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 ++ A+R+ + GIG+SG AQ FA +LM++G A A+ + + + +D+++ Sbjct: 110 AANLIHGAKRVYVFGIGSSGYNAQEFAQRLMRMGKPAFAMTESNMMTIASATMQDNDIVI 169 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 A+S +G E+ A + + G ++A+T F + L + + + E + I++ Sbjct: 170 ALSVSGSTPEVCSAVRDSRKNGATIIAVTAFKNSLLGKMSDLLFQIKSTELVGDYDFINS 229 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 A + D+L L+Q + + + Sbjct: 230 QFAVTYVIDMLTQMLLQ--FTDFRATMNKTVEAI 261 >UniRef50_D2ELR8 Transcription regulator n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2ELR8_PEDAC Length = 280 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 56/280 (20%), Positives = 123/280 (43%), Gaps = 9/280 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + ++ + + +K++A +++ P +++Q+A++ G S ++V++ A+++ Sbjct: 5 SVVFTLKNQLGDFTKKEKQVARFIIKYPQAVIDSNAKQVADQVGTSAATVIRLAKRVCKN 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G P LK L + +I D L ++ +K+ + T Sbjct: 65 GLPELKERLKNETMVNDKF-----FEEIDPADTLEVMKQKMEYRINHTIEQTNRTVKGGA 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + ++ A + GIGAS LVA + K ++G A +D+H L + S Sbjct: 120 VRNAAKLVDQADVVYTYGIGASHLVADDLQQKFGRLGKPVAQTQDVH--LLAAEMSKGRG 177 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT--IAEEQATNS 239 +++ IS +G +E + V+AIT + L ++++ L E S Sbjct: 178 VVVLISNSGETKETLQLLGAARALDLPVVAITRVLSSPLARQSTVVLAHSDSGEGNQLRS 237 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 A+ ++ AQ + DLL+ + ++ E +++ S ++K Sbjct: 238 AATTSLMAQLYVVDLLYYSFLKLHFEDNVDQLTKSRKIIK 277 >UniRef50_C4KYQ0 Transcriptional regulator, RpiR family n=1 Tax=Exiguobacterium sp. AT1b RepID=C4KYQ0_EXISA Length = 267 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 116/277 (41%), Gaps = 17/277 (6%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 +I+ Y + S+KK+ADYL+ + A ++ LAN S ++ +F +K+G + Sbjct: 3 EQIKHVYSEMTGSEKKIADYLMANMNEAIEMNITDLANAIATSPGTITRFCKKIGVGSYS 62 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 +LKL + + L + + + + + T ++ +++L Sbjct: 63 SLKLMMQKTLTETNLPQTTSLEP--------------MQRSYIELIQTTAHLIDQDELLA 108 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 + S+R + L G+G +GLVAQ ++L ++G A D H+++ + +D+++ Sbjct: 109 ICKEITSSRSVHLYGLGNAGLVAQEMEYRLRRMGLLATTAFDSHSMVMDASIVTSEDVVI 168 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 A S +G RE+ A G +A G+ + L + + L T I+ Sbjct: 169 AFSNSGESREVVQAMQLAKESGCTTVAFVGYQHSPLAELVDYRLLTAGASGEAFL--INT 226 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 D + L++ + E + + +L Sbjct: 227 QLPLLFTADAVTKTLMETN-EALKAHYLQTLKALDRL 262 >UniRef50_Q1YGT9 Putative transcriptional regulator, RpiR family n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YGT9_MOBAS Length = 305 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 62/282 (21%), Positives = 120/282 (42%), Gaps = 6/282 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + R+RQ + ++D+ +AD LL D A S + +A AGVS+ SV++FA+ +G + Sbjct: 17 SLIDRMRQELPAMKRADRAVADALLENIDAATRSSVKAVAGRAGVSEPSVIRFARHMGCE 76 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF K+ L++ A S + + V + + + A+ + Sbjct: 77 GFSDFKIRLAQDYAIGRMYLSADYQHPAK---TGSDVAGHVYEATSQALASAFAQRDPAA 133 Query: 122 LHECVTMLRSARRIILTGI-GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L ++ +RR+ G+ G+S VA +L ++ A+A D + T + D Sbjct: 134 LDRAADLIDGSRRVFCFGVGGSSANVAAEAENRLFRLDLAASATADAYKQRITAATAGKD 193 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL-YTIAEEQATNS 239 D+ L S TG R L +A + G ++A+T L A + +E+ Sbjct: 194 DVFLMFSVTGRPRSLIESARSAKQCGASIIAVT-TAGTPLAIEADVLIPLIAFDEEKFFY 252 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + Q + D L L + ++ ++ ++ ++ L Sbjct: 253 MPNRGRYGQLFILDCLATLLGGRRMKHISSKLWNARTMLADL 294 >UniRef50_B2UK47 Transcriptional regulator, RpiR family n=5 Tax=Ralstonia RepID=B2UK47_RALPJ Length = 280 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 60/232 (25%), Positives = 111/232 (47%), Gaps = 7/232 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + RIR L+ +++++AD++L QP T L +A EAGVSQ +V++F + +G Sbjct: 16 DLRERIRAARPSLSPAERQVADWVLRQPGTVLSLPVAAIAREAGVSQPTVIRFCRSMGCH 75 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G KL L++ A+ + + + +++++ A+ A + Sbjct: 76 GLSDFKLRLAQGNAAHDKPRGAAAPSNVPRSGT------RVLQDTIDALAAMRDRFDPLA 129 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V ++ +A RI L G G+SG+VA++ K + G A A D + + ++ D Sbjct: 130 LDAAVALVDTAHRIDLYGFGSSGVVARDAQTKFFRYGIPANAYSDPYLVSMSLNVLQAGD 189 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE 233 +++AIS +G EL A + + +G V+A+T + L A L + Sbjct: 190 VVIAISKSGALPELQTAVERVRELGVHVIAVTA-PGSPLAALADVVLPADVD 240 >UniRef50_B7LQI9 Transcriptional regulator n=32 Tax=Gammaproteobacteria RepID=B7LQI9_ESCF3 Length = 301 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 117/279 (41%), Gaps = 11/279 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I +R+ L ++K++A ++L A L +LA SQ+SV +FA+ LG K Sbjct: 20 DIISCITERFMALTATEKRIAQFILDDVPAAVELPIAELARLTQTSQASVTRFARALGCK 79 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 LK+ L+++LA + + + + + Sbjct: 80 DVRELKVKLAQSLAIGQRFILDVPDLDG---------VQGIYESIISVLETHRRSLDMNA 130 Query: 122 LHECVTMLRSARRIILTGI-GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + V+ L AR+I+ G G S + +Q ++L ++G + D + A P Sbjct: 131 ISQAVSWLSQARQILALGTGGGSTICSQEIQYRLFRLGLPVVSQNDALMMRMMCSAVMPQ 190 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ +S G E+ +A + G +V+AIT L ++ L + +E Sbjct: 191 DVVIVLSLGGYTPEIIESAAIARQYGARVIAIT-PAQTPLAEQVDLVLPLLVQESDYIFK 249 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + +A + D+L L + A +R+R + ++ Sbjct: 250 PTPSRYAMLAMVDVLATELAMANKAQAKDRLRRIKLVLD 288 >UniRef50_C0X0S9 RpiR family transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X0S9_ENTFA Length = 285 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 55/285 (19%), Positives = 121/285 (42%), Gaps = 4/285 (1%) Query: 1 MNGLLRIR--QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 MN L I ++ + ++ + D++L + H+S +LA S S++V+ +K Sbjct: 1 MNPLNLIECLEQKERYTYNEGLIIDFILSHTERVLHMSIYELAEATNSSTSTIVRLCKKT 60 Query: 59 GYKGFPALKLALSEALA-SQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 GF K+ LS L +V + D L+ +K+ + T + +T + Sbjct: 61 ETSGFKEFKIRLSRDLEIHYQAIRNVDANMPFLAQDSDLLIAKKIAQLTTETVQSTQQLL 120 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 +E L++ + +L +A I+ G+ S + +F KL++I + + Sbjct: 121 TEAMLNKSIDLLLTAENILAVGVSNSYIRLTDFQTKLLRIQLFIHLIPYQAEQFYLAINA 180 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ-A 236 + +D+ + +SY+G E+ A G ++AIT + L + A+ L E Sbjct: 181 TKNDVAILVSYSGNTAEIVNEARIFAEGGTPIIAITSDLNSQLAKYATVILPIPNVEHAD 240 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++ S+ A + ++L+ + ++ + +++ + K Sbjct: 241 FKVSTFSSQLAIEYILNVLYSCIFSRNFDKNYTSQKNTPTSILKF 285 >UniRef50_A8RCR9 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RCR9_9FIRM Length = 289 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 67/283 (23%), Positives = 125/283 (44%), Gaps = 7/283 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RI L++S++KL +Y+L P +S+ L+ +S+ ++++F ++LG++G Sbjct: 6 ILTRIESLMPFLSKSEQKLGNYILTHPKDVTDMSTSALSQACDISEPTLIRFTRRLGFQG 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + KL LS S + ++ +D + KL ++ +TLN L Sbjct: 66 YKDFKLHLSANFISNQIDSTPV---KVNLNDSAIEIYRKLASFTINSLNSTLNTLDANDL 122 Query: 123 HECVTMLRSA----RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 + A R+I L+G+GAS ++ F K+M++ D+H L Sbjct: 123 ENATNYIYVAAKQNRKIFLSGMGASTVLIHEFQIKMMRLNIQTIFFEDIHLRLEACANLK 182 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 +DL + + G +E D K++ IT F + + ++A LYT E Sbjct: 183 KNDLFICFTTLGASKENYELIDIAHERKAKIIVITQFGNSQIAEKADIALYTSIIENNLR 242 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 AS ++ Q M+ D+LF+ + +D ++ K+L Sbjct: 243 LASQTSIILQSMVIDVLFLTIACKDYASITNSVKDFREKFKQL 285 >UniRef50_C5D4L1 Transcriptional regulator, RpiR family n=1 Tax=Geobacillus sp. WCH70 RepID=C5D4L1_GEOSW Length = 282 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 120/282 (42%), Gaps = 6/282 (2%) Query: 1 MN-GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 MN I ++ ++++ +K+A Y+L P+ + +LA AGVS+++VV+FA LG Sbjct: 1 MNEVYRLIAEKLPEMSRAQRKIAKYVLNNPEAVPFFTVGKLAKMAGVSEATVVRFATFLG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 + G+P + A+ E++ Q + ++ D + + E + +E+ + A Sbjct: 61 FSGYPEWQQAMQESMKRQLTTVERLKISEEVYDSEDKSIFE-MFQEDIERIKAMSVQIDM 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + ++ V + A+RI + ++ + + + NA +R+ H + + + Sbjct: 120 DLFYQAVQYITDAKRIFIIANRSAVSLGLFLEFYFDILFENAELIRNPHGISEKLFRLNK 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD+++ +S+ + A G K++ IT + L L E + Sbjct: 180 DDVVIGLSFARYTKSTIEAVAFAKDRGAKIIVITDHLLSPLVSYGDVTLCAPTEMPSF-- 237 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 I + A L + L + ++ + + E + ++ Sbjct: 238 --IDSFVAPLSLVNALITEVGRRKRSEVEKHLSDLEEIWERF 277 >UniRef50_C2L0R5 Possible transcriptional regulator RpiR n=1 Tax=Oribacterium sinus F0268 RepID=C2L0R5_9FIRM Length = 314 Score = 223 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 118/283 (41%), Gaps = 5/283 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I+ Y + ++ +K+ADYL+ D + +LA +GVS +SV +F + +GYK Sbjct: 27 SVIPEIKSLYPQMNEAMQKIADYLIDTEDKKCVERASELARRSGVSTASVSRFVKMMGYK 86 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRG-DDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F +L + + ++ + + + ++ + T + + Sbjct: 87 EFRDFRLKIVMEKQEENRQEENELNYNGEPITGDAHSICKTIFSKSVRELEETWGILDFD 146 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + ++ ARRI++ G+G S + + +L +IG+ D H ++ Sbjct: 147 TMQTVADLIHEARRIVVIGVGRSKVTMEALYSRLYRIGYPIMMFSDAHEIVNITSIMEKK 206 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L+ +S G + + A + G +V+ I+ + L + + + L++ + Sbjct: 207 DILICVSNFGQSKSVVEGARRAKKRGIQVVGISSIKESPLAKISDYTLFSAYDYNNAQDG 266 Query: 241 SI----SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ S AQ ++ D L++ + ++ + + Sbjct: 267 NLFDPSSENLAQLVIVDCLYMLVAHKNKRKNITYFKTFSNEIH 309 >UniRef50_C0D858 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D858_9CLOT Length = 275 Score = 223 bits (569), Expect = 5e-57, Method: Composition-based stats. Identities = 53/257 (20%), Positives = 112/257 (43%), Gaps = 6/257 (2%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 ++R L +++ A+YLL LA EA VS+++VV+ K+GY G Sbjct: 12 KLRGVIGSLGAQERRFAEYLLNSFAGIEKEPIAVLAKEAQVSEATVVRVCHKMGYSGLKE 71 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 LK+ ++ + + + E++ A+ T+N+ E+++ + Sbjct: 72 LKIVVARENETAGSFDGGIGGQY------MDELKERVFMGAIRALQDTMNLIDEDEVEKA 125 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 +L +A I + G+G S VA++ +LMK+G + + + + + D+ + Sbjct: 126 TKVLCNANYISIYGVGGSVPVARSLKHQLMKLGIPSNVYNEFQPTIIAAEKYNKGDVAIG 185 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 IS++G ++ A G + IT + +A+ + +T +E + A Sbjct: 186 ISHSGESSQVVEALRIARGKGATTICITSYGDSAITHCSDVKFFTTSETLLNGGDNSLAR 245 Query: 246 HAQGMLTDLLFIALIQQ 262 AQ + +LL++ + + Sbjct: 246 IAQTSIINLLYLNVALK 262 >UniRef50_Q15N75 Transcriptional regulator, RpiR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15N75_PSEA6 Length = 282 Score = 223 bits (569), Expect = 6e-57, Method: Composition-based stats. Identities = 107/281 (38%), Positives = 162/281 (57%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ +I+ L+ S+ KLA ++L + R LSSQ+LAN GVSQSSVVKFAQKLGY Sbjct: 1 MSTFTKIKAIKDTLSNSELKLAKFVLSSSNAVRDLSSQELANVVGVSQSSVVKFAQKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG+PA KL + +AL S + +H +I +D + V EKL+ A + T N+N E Sbjct: 61 KGYPAFKLGVIDALNSTASEGN--LHGKITLNDSFKQVSEKLLSSKVAVLTETKNLNEEA 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 H+ V +L+SA+RI++ G+G S LV ++F++KL K+G A DMHA LA S + Sbjct: 119 AFHQAVELLKSAKRILICGLGGSALVGKDFSYKLQKLGMLAIEEPDMHAQLAFAATLSEN 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL+ AIS +G RE+ + + KV+ +T + + A LY++AEE++ + Sbjct: 179 DLVFAISESGSTREIVNVVKQAKQNSCKVITVTRYGATPVSDLADIKLYSVAEEESARLS 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 SI A AQ + D+LFIA+ Q + + + ++V Sbjct: 239 SIMARTAQEFIIDILFIAITQS-SRQGRQLLEKTNSVVSDF 278 >UniRef50_C2KAY2 Transcriptional regulator n=6 Tax=Lactobacillus RepID=C2KAY2_9LACO Length = 281 Score = 223 bits (569), Expect = 6e-57, Method: Composition-based stats. Identities = 72/280 (25%), Positives = 137/280 (48%), Gaps = 3/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N +I Y L ++ K +AD +P + + Q+L S +SVV+F + LG+K Sbjct: 3 NLANKISDVYPNLNKTSKLIADVYFKEPRIFLNKNLQELGTITQTSGASVVRFCRNLGFK 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF ++A ++ + ++ + I +D V KL + + Sbjct: 63 GFKDFQIACAQEMPNKQ---DAMVDTIINTNDEPTSVLYKLQLSLGKNIADIGKTIDHKS 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V ++RSA++I + G GASGL AQ+ +KL++ G N V+ H L V + +D Sbjct: 120 LDAAVDLMRSAQQIYVAGEGASGLAAQDLFYKLIRSGKNVNFVQSSHIALEQVANINKED 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L+ SY+G+ +E L A + + K++A+T + L+ A + + E+ + Sbjct: 180 ILIVFSYSGLTQEPLLMAKQAQKNNAKIVAVTRIQDSPLKNMADTVITLPSNEKLLRYGA 239 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 I++ A+ + LL+++LI +LE +++ ++ L +L Sbjct: 240 INSLFAEIFASSLLYLSLISPNLEELNMKMKTTQNLTNQL 279 >UniRef50_C0XD02 RpiR family transcriptional regulator n=1 Tax=Lactobacillus gasseri JV-V03 RepID=C0XD02_9LACO Length = 294 Score = 222 bits (568), Expect = 8e-57, Method: Composition-based stats. Identities = 60/282 (21%), Positives = 114/282 (40%), Gaps = 3/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M ++R++ + ++ ++K +A+YLL + + + +A + S S++++ KLG+ Sbjct: 1 MLIKDQLREK-KNMSNNEKIVANYLLKADENIEKDTVRTVAEKTYTSPSTIIRLCHKLGF 59 Query: 61 KGFPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 GF K + + +V ++ R +D R V K+ + T V Sbjct: 60 TGFSDFKNKFLNEVKYFNLQFQNVDVNFPFRREDTAREVMSKITDLYIETIKDTEKVVDM 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 L C + + I + G A +F K+MKIG +++ L + Sbjct: 120 RTLLRCRKICSESEEIHIFSYGTYLNQAYSFKEKMMKIGKKVMISSNLNYQLYEAEIMQA 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-N 238 D+ + ISY+G L A + + +AIT N L + LY +E N Sbjct: 180 GDIAIIISYSGETNNSLLIAKQCRKNNIPTIAITSIGENDLTKICDETLYISTKESLYKN 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 S + + D+L+ + Q D E E + ++K Sbjct: 240 IGDYSIHLSVSYVLDVLYSLIFQNDFEHFYETKMNLAMSLEK 281 >UniRef50_C3WAG5 Transcriptional regulator n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WAG5_FUSMR Length = 283 Score = 222 bits (567), Expect = 9e-57, Method: Composition-based stats. Identities = 50/277 (18%), Positives = 124/277 (44%), Gaps = 3/277 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L + Q + +++K+A ++L ++ + ++ + G S +S+ +F +K+G++ F Sbjct: 7 LFLLDQLLPSFSPAEQKIALFILENTFAVIDMTIEDMSEKIGTSVASISRFTKKIGFENF 66 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 LKL +++ + S + I + + + + K N+A + ++ + +K+ Sbjct: 67 YLLKLGIAKEFVN---SSNKTISLNVNKNSNATDIYTNVAKTNSAILEESIEYFNTDKME 123 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 E ++ +A I L +GASG++A+ +K +++G + + D H+ L D+ Sbjct: 124 EISEIILNANHIYLFAMGASGILAKESWYKFIRLGLKCSMIEDFHSQLLQASILDDTDVA 183 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 L S++G+ +++ + + + IT + Q CL+ + S Sbjct: 184 LIFSHSGINKDVLTLLEIINETPAYSIGITNYARTPFSQSVDICLFFSENSTPMDKVGFS 243 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + Q ++ + L+ L + + + + + KK Sbjct: 244 SRIPQLIIIESLYRILSLKLGKKSKICQERYKQIFKK 280 >UniRef50_UPI000196B715 hypothetical protein CATMIT_00151 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B715 Length = 282 Score = 222 bits (567), Expect = 9e-57, Method: Composition-based stats. Identities = 60/277 (21%), Positives = 124/277 (44%), Gaps = 3/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + I Y S+KK+A Y++ +++ L+ +G S++SV +F +++G K Sbjct: 4 NVIDEIYSSYDHFFDSEKKIAKYIMHHTSEVVNMTVGDLSQASGASEASVSRFCKRIGLK 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK++L++ L S + I N+I D + + ++ + T+ + K Sbjct: 64 GFHHLKISLAQELVE-IPSCNTTISNRISITD-VNNSLDSILANKVEELTQTITMMKSNK 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L E + + +R I +G + VA + +K +IG ++ + L + S +D Sbjct: 122 LDEILDCILKSRHIYFVAVGNTVPVALDGCFKFNQIGIPSSTSSILETELGMILNVSKED 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++AIS +G + A E L+IT +++ + + + T E+ Sbjct: 182 MVIAISNSGESSGVLTAIKEAHNQKATTLSITNSDKSSIALESDYHITTATREKVYLEGY 241 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + + + ++L++ L E A E+ E L+ Sbjct: 242 CFSRVSATAVIEILYLFLT-TMKEDAHEKSAQHEDLI 277 >UniRef50_C0C5Q9 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C5Q9_9CLOT Length = 287 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 70/278 (25%), Positives = 136/278 (48%), Gaps = 5/278 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGV-SQSSVVKFAQKLGYKG 62 L +I + Y L + K+LADY+L P + S L + + S++SVVKF + LG+ G Sbjct: 11 LAKISELYPQLTKGQKQLADYILKNPSEVVNKSITDLISHTSLKSEASVVKFYRLLGFDG 70 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F + K+ L++ L ++ S + I DD + +K+ +++ ++ + E + Sbjct: 71 FKSFKIKLAQELVNRTFYHS---ESDITIDDEPTEIKKKVFLGAMSSLSKNADIAAGECM 127 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 +L SA+RII+ G GAS + Q ++L ++G N +D H A + P D+ Sbjct: 128 D-AQKLLSSAKRIIILGHGASASICQYAFFRLTELGLNCVCNQDAHMNAAILTHPRPGDV 186 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 +L +S +G +L + + + ITG +++ + + L T++EE+ + ++ Sbjct: 187 ILCVSQSGETADLYKQIEMAYQRRIPAILITGAPGSSIARLSQVILSTVSEERNILTDAL 246 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ +Q L D LF + + R++ + KK Sbjct: 247 NSRVSQFCLIDALFSMISIANANEMLPRLQDTRNTFKK 284 >UniRef50_C9A459 Phosphosugar isomerase transcriptional regulator n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A459_ENTGA Length = 268 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 64/266 (24%), Positives = 127/266 (47%), Gaps = 8/266 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + I L+ +D KLADY++ D ++S LA + S ++V++F++KLG+ Sbjct: 1 MSVVTTIESIKNELSTTDLKLADYIVENLDEIPTMTSNVLAVHSNTSPAAVIRFSKKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F KLAL++ + ++ + ++ I+ DD + K+++ N + AT + E+ Sbjct: 61 SKFSDFKLALTKDIENRIYNE----YSDIQNDDSFQTAKNKILRNNKMIIDATDPILDEQ 116 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + V + A+RI + G+G S L A++ K +IG +D + L ++ D Sbjct: 117 TVQQVVDKMFHAKRIYVYGVGTSVLAAEDIRQKWTRIGKTVIFDKDRYLLTQQMKNDGAD 176 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ----A 236 L IS++G R++ + +G L ++ N L ++ ++T E Sbjct: 177 SLFWGISHSGKNRDVLSLVEIAKSLGMPTLGMSQLGQNQLTKKVDTPIHTARTEDIKNGH 236 Query: 237 TNSASISACHAQGMLTDLLFIALIQQ 262 S + + Q + DLLF +++ Sbjct: 237 YGSGATHSIILQIVTIDLLFYFYMRR 262 >UniRef50_C2C459 RpiR family transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C459_LISGR Length = 284 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 61/271 (22%), Positives = 116/271 (42%), Gaps = 4/271 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +I+ ++K +ADY+L L+ Q+LA + S +S+++F +KLG G Sbjct: 2 LLQKIKT-MTNFTNTEKVIADYILANTANMEQLTIQELARKTYTSHASIIRFTRKLGLDG 60 Query: 63 FPALKLALSEALASQPES-PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F + K+ L + + + + DD + + ++++ + + ++ E+K Sbjct: 61 FKSFKIELLKTNQQENHVLSEINPNIPFEHDDSILKISREMMELTQQTITESYHLLDEQK 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + L A+RI L +G S + A++F KL KI A D + +D Sbjct: 121 LFQATRQLYDAKRIFLFALGDSQIRAESFQNKLWKINQYAILATDRSEWAVHTANITSED 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE--QATNS 239 L ISY AA+ + G ++ +T + L + A C+ E Sbjct: 181 CALFISYDAKSPHDITAAEWLKSRGVPIILLTSHITSKLSKIADICIAVPNLEDKSELKI 240 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPER 270 A+ ++ A + +++F L Q D E + Sbjct: 241 ATFASQIAFDYILNVIFSTLYQIDYEKNKDY 271 >UniRef50_Q1J381 Transcriptional regulator, RpiR family n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1J381_DEIGD Length = 286 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 55/253 (21%), Positives = 105/253 (41%), Gaps = 12/253 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L R+ L + +++A Y++ P+ + + +LA AGV +S+V + ++LG+ Sbjct: 18 SALARLHAERAQLPPTLERIAAYVVAHPEEVIYQTITELAATAGVVESAVTRLCRRLGFS 77 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF A K+ALS ++ + + ++ A+ T V Sbjct: 78 GFHAFKIALSGDVSQAQGAAEATDPFSVA------------ARQAVQAIEGTRQVADPAA 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + +A R+ + G SGL AQ A KL ++G A A D H SP Sbjct: 126 LERVAQAIAAATRVDVVGQSNSGLSAQFLANKLARVGVPAFAYTDPHLAAVAAATQSPRG 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++ + +G + G +A+T + + + A L T + E + Sbjct: 186 VVVGFTRSGSTIDTVQTLRLAASKGACTVAVTHRASSPVTRYAREVLATSSPESPLAGGA 245 Query: 242 ISACHAQGMLTDL 254 +S+ +Q +L + Sbjct: 246 LSSLVSQVLLVEA 258 >UniRef50_Q71W74 Phosphosugar-binding transcriptional regulator, RpiR family n=17 Tax=Listeria RepID=Q71W74_LISMF Length = 283 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 65/277 (23%), Positives = 116/277 (41%), Gaps = 2/277 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L++IR+ L S+K+LA+Y+L P ++LA A VS +++ + KLG Sbjct: 1 MNILIKIRE-LTNLTNSEKELANYILANPKKTLQCKPKELATAAFVSAATIYRLINKLGL 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G LK+ ++ +L E + I D + L + + TLN E Sbjct: 60 NGIGELKIEIASSLRETNEEKDLNYDYPILESDTPYQIMTNLNQIYKGTIDETLNNADPE 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L + L A+ I + A+ AQNF +++ +IG + + + S + Sbjct: 120 ELVKIGEKLIQAKTIDVYAASANLFFAQNFKFQMQEIGVLVNVPEEDYIQSLSAANSDEN 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS- 239 + + +SY G R L + ++ IT N L + A+H +Y + E N Sbjct: 180 HIAIVVSYGGRSRTLQRVVKILSENNVDIILITSMQDNPLVEFATHKIYMASAENHYNKV 239 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 +S S + + D L+ Q+ E + + Sbjct: 240 SSFSTRQSLLSIFDTLYSIYFNQNYEKNIQYKTTNYQ 276 >UniRef50_C2LK66 Phosphosugar-binding transcriptional regulator n=4 Tax=Enterobacteriaceae RepID=C2LK66_PROMI Length = 283 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 71/284 (25%), Positives = 134/284 (47%), Gaps = 8/284 (2%) Query: 1 MNGLLRIRQRYQGLA----QSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQ 56 M+ L + + + L ++++LA YLL D +++ +LA +AGVS +SV++F++ Sbjct: 1 MSTLTK---KLENLRLQGKGTEQRLAHYLLENSDNIASMNAAELAQKAGVSSASVIRFSR 57 Query: 57 KLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNV 116 ++GY G+P K+ Q +S S ++ + D + K T A+ ++ + Sbjct: 58 QMGYGGYPEFKIDYLSE-EKQQKSSSDILYANLAKTDSTEQIIAKTGHLFTTAIQDSIAL 116 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA 176 + + SA+RI+L G+GAS +VA + KL+++ N D+HA LA Sbjct: 117 LDAATIDLLAEKMISAKRIVLFGVGASAIVASDIFHKLIRVNKNTLFSADLHAQLAYSAN 176 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 S DDL +A++ G ++N + G +A+T F + + A++ L +EQ Sbjct: 177 LSADDLAIAVTARGNTADINRMLKAAKQEGCITVALTRFGQDEATRLANYTLPYFYDEQH 236 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + I+ Q + D+LF + A + + V + Sbjct: 237 SQLGVITPQVLQMVAFDVLFFKYMTLAKGSAEKALLKGRQAVMQ 280 >UniRef50_Q38V38 Putative transcriptional regulator with a sugarisomerase domain, RpiR family n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Q38V38_LACSS Length = 276 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 126/278 (45%), Gaps = 9/278 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + I+Q+Y L+ ++K+A ++ + + + + +LA E VS S++ +F +K+G Sbjct: 1 MAIIEHIKQQYSFLSPQEQKVALAVIQKGASIQRIGIDELAAELQVSNSTISRFVRKIGC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + F KL SE P + D ++ + + T + Sbjct: 61 QNFVDFKLQFSE-------GPQPTMTGVQGQVDHESQTSVEIYQFYQDVITKTQARIKQA 113 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V+ +++++++ + G+G+SG F +L ++G A V + H +L T + + Sbjct: 114 DLDQLVSWIKTSQQLFIYGLGSSGYTGAEFGQRLTRMGIQATVVTESHMMLMTSRIINKT 173 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++ +S +G E+N A G K AIT T + L + L+ ++ Sbjct: 174 DLVIGLSNSGNTEEVNQAVQNARENGAKTAAITSGTDSPLAAASDLTLFVEDSIGFASAR 233 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +++ A + D+L + L++ E R++ + + Sbjct: 234 FVNSQFALTYVIDILAMLLLED--EQYNWRMKQTVDTI 269 >UniRef50_Q0BBX6 Transcriptional regulator, RpiR family n=65 Tax=Proteobacteria RepID=Q0BBX6_BURCM Length = 324 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 120/279 (43%), Gaps = 6/279 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + RI + L ++++K+A Y+L A H S LA +AGVS ++V +FA+ +G + Sbjct: 38 DIVARIAECAPELREAERKVAAYILADLARAAHASIGALARDAGVSVATVTRFAKAVGCR 97 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 LK+ +++A A + P +V +++ A+ + Sbjct: 98 DVRELKVLVAQAAAVGQRFLVPSDAHPAEDASPASVVYDEI----RVALAHNHQLLRNTS 153 Query: 122 LHECVTMLRSARRIILTGI-GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L A+ + + G G S +A ++L++ G A+ +D S D Sbjct: 154 FDAAADLLAGAKMVYVYGQGGGSTALADELRFRLVRFGRPVASYQDSLLQRMVAATLSRD 213 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +++A+S +G EL + R G ++AIT + L + A H + +A E Sbjct: 214 AVVVALSVSGRVPELLESCRLAKRYGATLIAITA-PASPLAKLADHLIPVVAFETDFIYK 272 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ +A M D+L + + + E +R + + Sbjct: 273 PSTSRYAMMMAIDVLVTGVALRLGDAGRESLRRIKHALD 311 >UniRef50_A9WVK2 Transcriptional regulator, RpiR family n=2 Tax=Micrococcineae RepID=A9WVK2_RENSM Length = 346 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 55/249 (22%), Positives = 107/249 (42%), Gaps = 2/249 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + R++ + ++ + K+A YL+ +P LS ++LA+E G S ++V +F + +GY Sbjct: 36 GVVNRLKAQLPEMSGAMSKIARYLIEKPLAPLELSIKELADETGTSAATVTRFCRLIGYT 95 Query: 62 GFPALKLALSEALASQP--ESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ ++ ++ L ES I DD R V L+ + ++ T V Sbjct: 96 GYAPFRVGVASDLGRSDARESWKTDIGRAFGPDDSPRDVLSTLMNAHARSLQETAAVLDL 155 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + + + + + GIG S ++A+ +L +IG +++A L + + Sbjct: 156 RLMKNLARRIALSEHVDIYGIGGSAVMAKELQNRLYRIGIPCHHCTEVYAGLTSASLQNS 215 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 + + IS TG E + G +A++ + L + A + T EQ Sbjct: 216 QCIAIGISNTGRTEETIQMLRQAGLAGATTVALSNNPNSTLAESADFQITTSVHEQFLQP 275 Query: 240 ASISACHAQ 248 +SA H Q Sbjct: 276 DDLSAKHVQ 284 >UniRef50_A1HTD9 Transcriptional regulator, RpiR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HTD9_9FIRM Length = 282 Score = 220 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 61/278 (21%), Positives = 129/278 (46%), Gaps = 7/278 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I++ Y G++ S KK+A+YLL D A L++++L GVS+++V++FA L YK Sbjct: 4 SLVKNIQEHYHGMSASHKKIAEYLLDHYDKAVFLTAKELGQTLGVSEATVIRFAVALNYK 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L+ AL + + ++ + ++ D + K + + + + T+ + Sbjct: 64 GYPELQQALQDMVKNKITTVERL---RLALLDGQTNLPHKALSTDISNIQLTMEEVTSAD 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V + AR I + + ++ + + L + N+ + + ++ + P D Sbjct: 121 FEKAVNEIIQARNIYIVSLRSATALGYFLHFYLQLLLQNSRLIHGVGTFFEEIRPAGPGD 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++ IS+ R+ G +VLAIT + L + H L +++ + Sbjct: 181 LVIGISFPRYTRQTVEGLKYARENGARVLAITDSLTSPLAPYSHHVLTARSQQISF---- 236 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 I + A L + L +A+ +D + +R EA+ + Sbjct: 237 IDSFAAPLSLINALILAVGARDSAKTADVLRQMEAVWE 274 >UniRef50_B9Y4T6 Putative uncharacterized protein n=2 Tax=Holdemania filiformis DSM 12042 RepID=B9Y4T6_9FIRM Length = 277 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 72/275 (26%), Positives = 135/275 (49%), Gaps = 6/275 (2%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 +++Q L Q++K +AD+ AR +S QLA+ + QS++++F++KLGY+ F Sbjct: 4 EKLKQVQNELTQTEKIIADFFQNHSLEARSFTSYQLADRLNIGQSTIIRFSKKLGYRSFR 63 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 L LS +L + + +I ++ +K+I++ TL N + + + Sbjct: 64 ELLEDLSTSLTEEK------VKEEIVVNEGTSSTNQKIIQQYQKMAQLTLEFNPPQVIDQ 117 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 V+ L+ AR+II+ G G S L A+ + + +K+G ++ + H + + + P D+L Sbjct: 118 TVSALKKARKIIVFGFGNSNLFAEYISNQWLKMGLDSFCSANSHIIFSMLSQFGPQDVLF 177 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 IS +G E+ AA V+A+T N L + L T+ E T +++ Sbjct: 178 LISESGETPEILKAARIAGHQNVTVIAMTRIQKNRLHGYSDIVLKTVNYETNTRLNAMTL 237 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +Q L D++++ L + D E + I SE L+ Sbjct: 238 RCSQLCLLDMIYLNLYKTDFEHYEKIIAESEKLLD 272 >UniRef50_C3RHU4 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RHU4_9MOLU Length = 285 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 57/281 (20%), Positives = 129/281 (45%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L ++ + +G + +K +A+Y++ + ++ +LA S +++ +F +KLG Sbjct: 1 MSLLSKL-EYKKGFSDIEKGIANYIIDHKEEVANMRLVELAEATFTSTATISRFCKKLGE 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 K + + K+ + ++ + ++ V + + +D ++ V +L + + AT + + Sbjct: 60 KNYNSFKINFASSVLTSYQT-DVDYNRPFKENDSIQEVTNQLGELYKDTIEATKALLDYD 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L++ + L I + +GAS L F +++ I + + + Sbjct: 119 VLNQVIEKLLKTSVIDIFAVGASYLSGLLFEHRMISIDHFVNFKSSPNDQDKRSLFVNKN 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-NS 239 + + ISY+G E+ D ++ G ++AIT + L++RA++CL ++E Sbjct: 179 TVAIVISYSGESHEIKTIVDRIVDNKGTIIAITSINDSYLRKRANYCLTMCSKENIVSKI 238 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + S+ + L DL+F L Q+D R + E +K Sbjct: 239 ETYSSKLSSDYLMDLIFSILFQKDYYPNLIRKINCEQKYEK 279 >UniRef50_C9A857 Transcription regulator n=3 Tax=Enterococcus casseliflavus RepID=C9A857_ENTCA Length = 297 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 64/281 (22%), Positives = 126/281 (44%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M ++R +GL ++K++ADY+L + L+ + +A S SSV++ A+K+GY Sbjct: 1 MLLGDKLR-LQEGLTNTEKRIADYILQNINDVPSLTIEVIAKHTYTSHSSVIRLAKKMGY 59 Query: 61 KGFPALKLALSEALASQPESPS-VPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 +GF + +L L+E +Q +P+ V + D + +K+ +++ T + Sbjct: 60 EGFKSFRLGLAEIAHNQMFNPTFVDANFPFSPKDQTPDILKKMADLTINSIHKTHAQVAP 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E + V L +A+RI L G S + A++F KL+KI + + Sbjct: 120 EMMEAVVQSLEAAQRIFLFARGDSQIRARSFQNKLVKINKYLILADEYGDDAWNASNVTQ 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-N 238 +D + I+Y G + VG V+ I+G + A+H + +E+ Sbjct: 180 NDCAVFITYRGKNTQYEKIMQHFRDVGVPVIVISGNAHAKIIPLATHAIIASHDERDFLK 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + S+ A + D LF L ++ + +R + +++ Sbjct: 240 VGTFSSQVAFEYILDSLFALLYAKEYQKNIVELRKKQTVLE 280 >UniRef50_A6UGP6 Transcriptional regulator, RpiR family n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6UGP6_SINMW Length = 284 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 72/274 (26%), Positives = 131/274 (47%), Gaps = 8/274 (2%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 R+R L+ +++++A ++L D + S +A VS ++V++ + G++GF Sbjct: 14 SRLRSVLPKLSDAERRVALWMLKNVDLSIRQSMSAIAQATDVSDTTVLRMCRTAGFEGFT 73 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 LKLAL++ E H+ + +L + T A+ T V E + Sbjct: 74 DLKLALAQEPREAIE------HSSGEPEASALQAAGRLFRAITQALNDTFGVLDEATFAK 127 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 + ++ +A+ I++ G+G SG+VAQ F + +++G A D + + P DL++ Sbjct: 128 ALDLVANAKHIMVGGVGGSGIVAQAFYQRCIRLGLRCDAPIDSQLQIMHAALTGPGDLVV 187 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 AISY+G+ + L E G L ITG + +AL + A L +++ EQ S ++A Sbjct: 188 AISYSGITSDPVLVLQEAKARGASTLCITGNSSSALARLADVVLVSVSHEQ--GSEPMAA 245 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 AQ L D L+ AL+ ++ E A + Sbjct: 246 QIAQMTLVDALYAALVARNPEPAQLTEERMVNAI 279 >UniRef50_UPI0001BC57B3 oxygen-independent coproporphyrinogen III oxidase n=2 Tax=Fusobacterium RepID=UPI0001BC57B3 Length = 538 Score = 220 bits (561), Expect = 5e-56, Method: Composition-based stats. Identities = 67/240 (27%), Positives = 132/240 (55%), Gaps = 2/240 (0%) Query: 41 ANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPI-HNQIRGDDPLRLVG 99 A +++V+F++KLG+KGFP KL+LS+ + ++ V I H +I+ D ++G Sbjct: 295 AENIYQGGTNIVRFSKKLGFKGFPDFKLSLSQDIGNRKAESHVNIMHEEIKPTDTFEIIG 354 Query: 100 EKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF 159 +K+ ENT A+ T + ++L + V M+ AR+I+L G+G SG+VA++F +KL+++G Sbjct: 355 KKVATENTMAVNNTYEITDFKELEKAVKMISEARKIMLAGVGFSGIVAKDFHFKLLELGK 414 Query: 160 NAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNA 219 D H L+ + + +D+L IS++G E+ A K++ +T + Sbjct: 415 QTLFENDTHMQLSYLATMNENDVLFVISHSGKTLEVFNLAKAAKNRKVKIITLTSVVQSP 474 Query: 220 LQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +++ L T+ + + ++S +Q + D+++I L+ ++ E + I ++ LVK Sbjct: 475 IRELGDIKLSTVEMKSDFRATALSPRISQLTVIDMIYIKLMLEN-EDLQDYIFNAIELVK 533 >UniRef50_A4E6N7 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6N7_9ACTN Length = 301 Score = 219 bits (560), Expect = 7e-56, Method: Composition-based stats. Identities = 57/266 (21%), Positives = 120/266 (45%), Gaps = 6/266 (2%) Query: 15 AQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEAL 74 ++S++++ DY+L A L++ QL+ A S+++V +F +KLG+ F + + +L+ L Sbjct: 35 SESEQRIVDYILEHQSEAPRLTAAQLSRAAATSEATVSRFCRKLGFGSFRSFQFSLARDL 94 Query: 75 ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARR 134 SQ D + + ++ + + AT++ + L V L+ A Sbjct: 95 ESQRNEGL----TDEVSLDNMEQSLKNILAAKVSELNATIDGIDHDTLAAVVHALKHAGV 150 Query: 135 IILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRE 194 I +G + VA + +K ++G A + P D+++ IS +G R Sbjct: 151 IEFAAVGNTNAVALDATFKFSQLGLRCMASTISETSIGFALTLRPGDVIVLISNSGKSRR 210 Query: 195 LNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS-ACHAQGMLTD 253 LN A G V+ I+ + + L + A + T+ E + + + + M+ + Sbjct: 211 LNRMAKAARNCGATVVVISSDSKSPLARLADYTFNTVNHEALLTTGDFAFSKISATMIIE 270 Query: 254 LLFIALIQQDLELAPERIRHSEALVK 279 +++ L+ + + A E I + E L++ Sbjct: 271 VIYNFLLPEIKD-AREHISYYEELIQ 295 >UniRef50_A8U5E8 Putative uncharacterized protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8U5E8_9LACT Length = 268 Score = 219 bits (559), Expect = 8e-56, Method: Composition-based stats. Identities = 55/278 (19%), Positives = 115/278 (41%), Gaps = 17/278 (6%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + RI Q Y L++ +K++A ++L + + L+ S +++ +F KL Y+ Sbjct: 6 DLSNRINQNYSLLSKKEKQVAAFILEHKKDIESWNIKDLSRLTETSNATISRFCAKLSYR 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F K +++ L+ P VP+ K+ T +++ + ++ Sbjct: 66 NFNEFKTFVTQELSGNPTPLQVPV---------------KIASYYTQLIHSASQLIETKQ 110 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 +++ V + + +I++ G+G SGL A ++L+++G V D H +L D Sbjct: 111 INDFVEAIHLSNKILICGVGNSGLSAMELKYRLVRMGLIVDVVTDPHMMLMDAVLLKKYD 170 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++AIS G + + A + V IT L + A L+ + Sbjct: 171 LMIAISNYGQTQAVIDACTIAKKEDATVFVITNQNHTPLTKIADQVLFASGRTSIPDEQF 230 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 I++ + D+L L++ + E R + + Sbjct: 231 INSQLPIHFILDVLCYVLLEN--KSYKENRRKTLTAID 266 >UniRef50_C3RHU3 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RHU3_9MOLU Length = 281 Score = 219 bits (559), Expect = 9e-56, Method: Composition-based stats. Identities = 56/266 (21%), Positives = 117/266 (43%), Gaps = 2/266 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L ++R+R + S+K +A+Y+L P+ LS ++L E S+++V++ +KL Sbjct: 5 ILEKLRER-KRFTNSEKLIAEYVLKHPEQLYQLSVEELGKETYTSKATVIRLCKKLEVNS 63 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + K + S+ + + + + + + ++ T + K+ Sbjct: 64 YQEFKRQVEFEYNELSRISSLLKDEPVDENSTYQDIVKVIPTIYDKSIVQTRLDLDQNKM 123 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + L A+RI + G G S +A A+K+M +G A ++ Q +S + Sbjct: 124 IQVINRLSQAKRISIYGTGISYTIASQAAFKIMTLGKECDAHSGINEHFILSQKNSRQCV 183 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + IS+TG E+ A + + G V+AI G LQ L + + + I Sbjct: 184 AILISFTGNNSEMIKIAKYLKKAGIYVIAI-GGKKGELQNYCDIYLNVYSSQDILSLEVI 242 Query: 243 SACHAQGMLTDLLFIALIQQDLELAP 268 ++ A + D++F++L+ +D + Sbjct: 243 TSFTATMYVLDVIFVSLLVKDYQSNV 268 >UniRef50_C9XPJ9 RpiR-family transcriptional regulator n=5 Tax=Clostridium difficile RepID=C9XPJ9_CLODC Length = 250 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 53/262 (20%), Positives = 112/262 (42%), Gaps = 15/262 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + ++ + L+ ++ L +Y L + + +ANE S + +V+F QKLG+ Sbjct: 1 MNLIDKLDINQKKLSTNEISLLNYFLKNSEKINQKKIKDIANETFNSTAYIVRFCQKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ K L + +++ E + ++ T N+ + E Sbjct: 61 SGYSEFKNFLVFSYSNRNERNKEF-------TKSQSDIFTDVM--------DTQNLINVE 105 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + C+ + +++ I G+G+S LV + + IG N D + + D Sbjct: 106 NIDMCLNEIHNSKHIYFFGVGSSRLVCTEMSQRFSAIGVNVKYYDDSTLMYLAASNITKD 165 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++A+S +G ++ A + KV+++T + N+L A L+ + + NS Sbjct: 166 DLVIAVSMSGETAQVIKACNIAKTNQVKVISLTNISVNSLSNIADIKLFVSSPQYNFNSV 225 Query: 241 SISACHAQGMLTDLLFIALIQQ 262 + ++ L + +F I++ Sbjct: 226 NYTSRVPALSLMEYMFHKYIEK 247 >UniRef50_C9S176 Transcriptional regulator, RpiR family n=2 Tax=Geobacillus RepID=C9S176_GEOSY Length = 244 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 57/259 (22%), Positives = 103/259 (39%), Gaps = 23/259 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M R+R L +D ++ DY++ + + Q++A +++V+FA+KLGY Sbjct: 1 MRFDERVRLYADRLNDTDDQIVDYIMEHREEIADIPIQKMAEALYTVPNTIVRFAKKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGF LK AL+ ++ + + + T + E Sbjct: 61 KGFAELKAALALEQRAEAAALAGG-----------------------TVIEKTKELLDER 97 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + E V L A+ + G+G S + A L +G A H +L Sbjct: 98 LIEEAVGKLHEAKHVFFYGVGDSAYFCEMMAKHLRCVGKRADFFVQRHDMLYNADRCGEK 157 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D++ IS +G +++ A + G V+++T F PN+L A LY A +Q N Sbjct: 158 DVVFVISASGETKQVLEAVAAAKQNGAFVISLTHFCPNSLADLADFRLYCWAPKQFLNKY 217 Query: 241 SISACHAQGMLTDLLFIAL 259 ++ + ++ L Sbjct: 218 DVTDRTSLYLVLRALSERY 236 >UniRef50_UPI00019054B9 hypothetical protein RetlB5_21050 n=1 Tax=Rhizobium etli Brasil 5 RepID=UPI00019054B9 Length = 259 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 67/267 (25%), Positives = 123/267 (46%), Gaps = 10/267 (3%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 + ++ +K+A ++L P T + S +LA EA S++SV++F ++LGY+GF KLAL+ Sbjct: 1 MTRALEKVAAFVLADPQTVLYKSITELAEEAESSEASVIRFCRELGYQGFQNFKLALAHE 60 Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR 133 LA+ + + + ++L++ A+ T + + + ++L AR Sbjct: 61 LATLQQPTASA----------PGDMVQELVETARTALEETERLLDRDAIQRVSSLLLDAR 110 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRR 193 I + G+ AS + AQ +KL ++G A RD H +S DDL + IS +G Sbjct: 111 HIEIFGVAASAITAQYLEYKLARLGIQAHIPRDSHLATMASATASADDLYILISSSGSTI 170 Query: 194 ELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTD 253 + A+ G KV+AIT T + L L + E + + +Q ++ D Sbjct: 171 DTLRVAESAHARGAKVIAITNRTKSPLAAICDFKLLASSPETPLTGGAFPSKISQLLIVD 230 Query: 254 LLFIALIQQDLELAPERIRHSEALVKK 280 L + + D +E++ + Sbjct: 231 ALANTITKLDPARLKTIKETAESVSDR 257 >UniRef50_B9E8A7 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E8A7_MACCJ Length = 285 Score = 218 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 58/282 (20%), Positives = 126/282 (44%), Gaps = 6/282 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +I + Y +K++AD ++ P+ +L +++A+ + S++++V+F+++LG Sbjct: 3 SVLGQITKMYDSFTPVEKRIADVVIEYPEKVVNLPIKEIAHLSNTSEAAIVRFSKRLGLS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G +K+ L+ L + +I D ++ EK+ A+Y T V S + Sbjct: 63 GIKVVKVELAREL---HTIADKKVPTKIELTDDEEVMKEKVFNNTIQALYNTEKVISAKV 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + E + SA+R+++ G+G S +VA + KLM I +A D+ + + + D Sbjct: 120 IDEAAQAITSAKRVMIFGVGNSRVVATDLHVKLMNIDQSAILATDLLSAITLLGHYEAGD 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L S T + + G K++ +T + + A L EE N Sbjct: 180 VLFVTSETSKNKVITDICKYAKEKGIKIILLTQKFSSPAIRMADIVLAMAKEENEINLGY 239 Query: 242 ISACHAQGMLTDLLFIALIQQDLE---LAPERIRHSEALVKK 280 ++ AQ + D+L++ + + + + + + + Sbjct: 240 MTVRTAQLTIVDVLYLRVCAYLKDTVLSNMQNLNETRKITHE 281 >UniRef50_C7TGD6 Transcriptional regulator, RpiR family n=3 Tax=Lactobacillus rhamnosus RepID=C7TGD6_LACRL Length = 277 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 64/281 (22%), Positives = 137/281 (48%), Gaps = 8/281 (2%) Query: 1 MNGLL-RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 MN RI Q Y L ++ +++ADY + S + L+++ GVS +++ +FA++LG Sbjct: 1 MNTFDSRIAQVYSALGEASRQVADYFRHNYAKVANSSLRNLSDKIGVSTATISRFARQLG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 + F LKLAL + + + + + +D K + N AA+ TL+ ++ Sbjct: 61 FASFDQLKLALLKEIDNTT-------NGDVETNDNSLASARKTVNANIAALEGTLSFLTQ 113 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 +++ V +L A ++ L G+G+S ++A+ +++ A D H L + + Sbjct: 114 DQIDHSVNLLLDANKVALFGLGSSNVIAKAAYHTFLRLPLTLIADNDYHMQLMSANKLTE 173 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+ + IS+TG ++ D + ++A+T + + L +R S ++I+E+ S Sbjct: 174 HDVAIVISHTGNDTDILALVDLLSAHQVPIIAVTSYATSPLAKRVSDVFFSISEDTRYRS 233 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ + +Q + D+L+ L+++ + + I V + Sbjct: 234 DALISMTSQLAIFDVLYTELVRRMGLQSEKTIALVHQAVAQ 274 >UniRef50_B7IEI4 Transcriptional regulator, RpiR family n=1 Tax=Thermosipho africanus TCF52B RepID=B7IEI4_THEAB Length = 290 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 121/278 (43%), Gaps = 16/278 (5%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + +++ Y L +++K+A Y++ PD H S +L+ A V ++++ + ++KLGYK Sbjct: 18 GIIEKLKAIYDQLKPAERKIARYIINYPDDVIHHSISELSELAKVGEATISRISRKLGYK 77 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF ALK+ L++ L+S + +I E ++ + +E + Sbjct: 78 GFQALKIELAKELSSISFEETKT---------------NSVISEVIESLNKLSKIINENE 122 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 +++ + + +I G+G+SG+VA+ A + GF A D H + + Sbjct: 123 INQIAKKVVESNKIFFFGVGSSGVVAEYGALLFTRGGFFANYYNDPHMQVISAAGMDNQT 182 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++ IS +G R+ + +AITG + + + +Y Sbjct: 183 VVFGISSSGNIRDTVKSMKVAKDSKAFTVAITGGYESKITEVVDKTIYIPPAGLERGMPK 242 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 IS +Q + ++F ++ E A E I+ + +K Sbjct: 243 ISPIVSQISILHMIFEEVLSLKKE-AIEIIKKANTTLK 279 >UniRef50_B1Y2D5 Glucokinase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y2D5_LEPCP Length = 616 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 63/269 (23%), Positives = 113/269 (42%), Gaps = 5/269 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +R L+ S++ +A LL P S ++A+ GVS +V++F + +G+KG Sbjct: 337 LLDDVRAALPRLSTSERLVAGDLLSAPRAWMSDSIARIADRCGVSTPTVMRFCRTMGFKG 396 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 KL L L+ + H +R DP ++ + +A+ + + Sbjct: 397 LADFKLRLGAGLS----GSTKVAHRPVRAADPTAERMATILNNSISALIELRDRLHPQAF 452 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V +L +ARRI + G+GA+ L A+ K ++G A D T PDD+ Sbjct: 453 EQAVKLLANARRIEVYGVGAAALAAEEAQHKFGRLGLQVVARTDSQLQNVTAAFLGPDDV 512 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 LL +S +G +N A R G +V+ + + L + + L E + Sbjct: 513 LLVLSNSGAVDPVNEAVMRARRSGTRVIGM-CPQRSDLARLSDVILPVDHPEDLQALVPM 571 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERI 271 + Q ++ D+L L Q + + Sbjct: 572 VSRLMQTVIVDVLVTDLALQRRDHINAAL 600 >UniRef50_C8QBF9 Transcriptional regulator, RpiR family n=1 Tax=Pantoea sp. At-9b RepID=C8QBF9_9ENTR Length = 297 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 57/279 (20%), Positives = 117/279 (41%), Gaps = 5/279 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L R L + ++ +A ++ P+T +S +A+ VS +S+ K A+KLG+ G Sbjct: 14 IFLLARTLAPELGRKERSIARFIDDNPETLASMSITDIADYLDVSVASITKVAKKLGFTG 73 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK+ + + + E VP + + E + + A+ L + Sbjct: 74 FHDLKMNIGKHITVSEELIDVPPVSGGEFY--TEKIVESTLYNSILALQDALKAIDIAVV 131 Query: 123 HECVTM-LRSAR--RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + + + RI++ G G SG + ++F KL+KIG ++ D H L T P Sbjct: 132 KSVAALFIHRSENARIVIAGCGGSGSICEDFNHKLLKIGIFSSVFSDSHKQLMTASLMRP 191 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+LL +S++G ++ G + + +T + + L + H + + + Sbjct: 192 GDILLTVSHSGQTTDIINMTKMANDKGAETICLTNYPNSPLSHISRHAIISSVKNNPITG 251 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + + + D +F + + E + E + ++ V Sbjct: 252 ENATTRIVHLNILDAIFTIIASKTSEFSQESLHNTRNAV 290 >UniRef50_C7T7Y4 Transcriptional regulator n=8 Tax=Lactobacillus RepID=C7T7Y4_LACRG Length = 315 Score = 217 bits (553), Expect = 4e-55, Method: Composition-based stats. Identities = 71/279 (25%), Positives = 135/279 (48%), Gaps = 3/279 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +++ + L+ ++ LADY+L + ++ Q+A +GVS +SV++F + Y Sbjct: 4 LLAKVQAQLPQLSPVNRALADYVLTDAEAFIAQTTAQIARASGVSAASVIRFVRLFDYPD 63 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + KLAL P+ ++ DD L + KL + AA+ + + + Sbjct: 64 LQSFKLALVRD---TQAPALTPLDPLVQDDDDLPTMMRKLSQTAIAAVRDLPDELDQAAV 120 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 +T LR AR I L G+ AS LVAQ+ KL++ G+ A D H L V ++ D Sbjct: 121 QTAITTLRHARHIYLVGMSASALVAQDLYLKLIRAGYLAIFDADAHTALERVYYTTAADA 180 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ SY+G+ +E+ LAA + R V+ +T P+ L+ AS + E ++ Sbjct: 181 VVVFSYSGLTKEVVLAAQQARRNQTPVIVVTRAEPSPLRDAASCVIALPPTEPLLRIGAV 240 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++ + + ++LF+ ++ +++ + R + L +L Sbjct: 241 TSMFTETYVANILFLGVVHGEIKQTEQNYRATSQLTGEL 279 >UniRef50_C3RKL9 Sugar isomerase n=3 Tax=Bacteria RepID=C3RKL9_9MOLU Length = 294 Score = 217 bits (553), Expect = 4e-55, Method: Composition-based stats. Identities = 56/280 (20%), Positives = 106/280 (37%), Gaps = 3/280 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + ++ + S+ + DY+L Q +++S+ +A S +V+ A+KLGY Sbjct: 1 MLIIHKLEHT--HFSSSEAIIIDYILEQGLKIKNMSANSIAKATFTSAPLLVRIAKKLGY 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ A K L + V D + + + + A+ T+++ + + Sbjct: 59 SGWNAFKEDFIAELEYLFKEQKVDASIPFVVSDDIMTISNNIGQLQIDAIQDTMSMLNHD 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + LR+A+ + L G+ + L+A+ F KL I N R S Sbjct: 119 DLQTALRYLRNAKELDLYGVSNNLLLAEGFRSKLFYIHRNVNICRLPGNPKVQAAMSDET 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-NS 239 + ISY+G + A + + ++AIT N L + A L + E Sbjct: 179 HCAILISYSGETEFIIEVAKVLKKKETPIIAITCIANNRLSKIADVTLRISSREMLHTKI 238 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + + L D L+ + D + + V Sbjct: 239 GDFATTTSIKYLLDTLYAGIFSFDYQKNLDYKIQIAKAVD 278 >UniRef50_C8ZYC7 Sugar isomerase n=4 Tax=Enterococcus RepID=C8ZYC7_ENTGA Length = 306 Score = 216 bits (551), Expect = 7e-55, Method: Composition-based stats. Identities = 59/282 (20%), Positives = 115/282 (40%), Gaps = 4/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M ++RQ LA +++ L D+LL P + ++L+ + V S+ ++ A+KLG+ Sbjct: 1 MLLQEKMRQI--KLAPAERSLIDFLLANPTAMADQTIKELSEKTYVHPSTFIRIAKKLGF 58 Query: 61 KGFPALKLA-LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ LK A L E V + D + + +KL K + TL++ Sbjct: 59 NGWLDLKTAFLEEQTYMSSHFTDVDANFPFSSHDGIMTIAKKLAKLEQTTIEDTLSLIHH 118 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++L + L +A I + A+ L++Q+F K+ ++G N + Sbjct: 119 DELQKAKQSLLNASHIKIFASNANTLISQDFVLKMRRLGKNIHVCDTFGESAYEASNCTS 178 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-N 238 D + ISYTG + + + ++ +T NAL + + L E+ Sbjct: 179 DTTAILISYTGENKMIKEIGKILAERQVSIIGMTSIGENALAKLSDCVLNITTRERLYSK 238 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A+ + + L D+L+ + + E + + K Sbjct: 239 IANFTINTSVCYLLDVLYGIVFSEHYEKNLQHLIDIGMAYDK 280 >UniRef50_A5IV96 Transcriptional regulator, RpiR family n=113 Tax=Staphylococcus RepID=A5IV96_STAA9 Length = 290 Score = 216 bits (551), Expect = 8e-55, Method: Composition-based stats. Identities = 61/279 (21%), Positives = 128/279 (45%), Gaps = 5/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L I +Y + +++KK+A ++L P + SQ LA+ +S SSV++F++K+ Sbjct: 3 NVLTEIDSQYPYMTKNEKKIAKFILNSPQKVIKMRSQDLASLLDISTSSVIRFSKKITDG 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ +S+ + S + ++ ++ + KL T A+ N +++ Sbjct: 63 GFHDLKINISKYV----PKASSIYNVELMNNESTESLRTKLHTRTTRALNHANNELNDKT 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + L+ + I + G GAS +VA + KL +IG N V++ H + + +D Sbjct: 119 IDQICHCLKRSETIFIYGFGASFVVATDLYQKLSRIGLNIQLVQETHIFATLLATHNSND 178 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSA 240 ++ I+ G + E+ + ++ IT N + Q ++ L +E + Sbjct: 179 SVILITNNGTQSEMQSMVKVIDDYHIPIITITSTRDNPVAQASNIVLTYGKTDENEMHMG 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + ++ AQ D+L+ + + + + I S+ + Sbjct: 239 ATTSLFAQMFTIDILYYRYVALNYHASLDFITQSKMALD 277 >UniRef50_Q041H9 Transcriptional regulator n=22 Tax=Lactobacillus RepID=Q041H9_LACGA Length = 279 Score = 216 bits (551), Expect = 8e-55, Method: Composition-based stats. Identities = 61/279 (21%), Positives = 124/279 (44%), Gaps = 7/279 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + +I + ++ SD+K+ +L P +++ QLA A VS +S+ +F + L Sbjct: 3 NIIDKIYAQMSSMSTSDQKVGRTILKNPAVVINITISQLAKRANVSDASITRFCRNLSLS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ L++ + + + D ++ ++ K ++ATL+ EK Sbjct: 63 GFHELKILLAQCIGQKESESLKKL-----PKDDMQAALGEIEKNKVGEIHATLSQIPTEK 117 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASSPD 180 L + ++++ ++R I ++ G + VA + +K +IG + A + A Sbjct: 118 LEKILSIIEASRVIQISAEGDTYPVAADAVYKFNQIGLLSFASGGNVETADAQTMNLGRK 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D L+ IS +G L + KV++IT + + + + L T + + Sbjct: 178 DCLIVISNSGESAALLKEIKLAHKNKLKVISITNNPASPIALASDYHLKTGVRQTILQNQ 237 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + A + + LF+ LI+++ E E I+ E +V Sbjct: 238 YYFSRVAAFTIIEALFLLLIKRN-EKRIENIKQHEKIVS 275 >UniRef50_C4F999 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F999_9ACTN Length = 288 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 57/286 (19%), Positives = 119/286 (41%), Gaps = 11/286 (3%) Query: 1 MNGLLRIRQRYQ------GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKF 54 M+ + + S++ + D++L + A ++S QLA + S++SV +F Sbjct: 1 MSTITELPSALPLITSSRQFLDSEQHIVDFILANTERAPQMTSAQLARASSTSEASVSRF 60 Query: 55 AQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATL 114 +KLG+K + + + +L+ LA++ V + D + + + ATL Sbjct: 61 CKKLGFKNYRSFQFSLARDLAAREGDERVTGEVTL---DDIEQSLANIKHAKQREIEATL 117 Query: 115 NVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATV 174 + + L V + R A ++ +G + VA + A K ++G A + + Sbjct: 118 DALDPDTLRRVVDLFRRAGLVMFAAVGNTNAVAIDAAIKFGQLGIRCVANTITESSTSLA 177 Query: 175 QASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE 234 DD+L+ +S +G + L G V+ I G L + A L T+ E Sbjct: 178 LTMGKDDVLVLVSNSGKSQRLERILRAAKHGGATVILICGNENAPLARLADIVLRTVNYE 237 Query: 235 QATNSASIS-ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + + + + ++ ++++ L+ A +RI E L++ Sbjct: 238 ALLTTVDFTFSKISATLIIEVIYSFLLSVMP-GARDRISGYEELIQ 282 >UniRef50_B1Q8U9 Putative phosphosugar-binding transcriptional regulator n=1 Tax=Clostridium botulinum NCTC 2916 RepID=B1Q8U9_CLOBO Length = 291 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 57/281 (20%), Positives = 116/281 (41%), Gaps = 4/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M ++ + S+K + DY+L ++ + ++++ E ++ S+ ++ ++KLGY Sbjct: 1 MLLTEKLLNT--KFSPSEKIIVDYMLKHKYDIKNKTIKEISKETFINPSTFIRISKKLGY 58 Query: 61 KGFPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 KG+ LK + ++ + +D + KL K N + TL++ S Sbjct: 59 KGWNELKEKYLNEIKYLDSNFENIDANIPFDKNDSYISISNKLGKLNEITIKDTLSLLSN 118 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L V +L SA I L S L++Q+FA K+ +I + + Sbjct: 119 DDLKNAVEILNSASDIKLFANNESILISQDFALKMNRIKKYVSICTVDGEQVFEAFNCRK 178 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-N 238 + + ISY+G + L + + +LAIT N L A+ L E Sbjct: 179 NSCAIIISYSGETKRLLETIPILKKYNIPILAITSLGNNTLANNANCVLRITTREHLYSK 238 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ ++ ++ + D+L+ + ++ E LV Sbjct: 239 ISNFTSNNSICFILDILYSCIFSKNFEKNLIHKIKVSKLVD 279 >UniRef50_C3FD32 Phosphosugar-binding transcriptional regulator n=1 Tax=Bacillus thuringiensis serovar monterrey BGSC 4AJ1 RepID=C3FD32_BACTU Length = 294 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 57/279 (20%), Positives = 116/279 (41%), Gaps = 8/279 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + ++++ + S+ ++ YL Q + + +++Q++ E S++++ A+KLGY Sbjct: 1 MLLIEKMKE--DIFSPSESEIIVYLFKQRENIKDKTTKQISKETYTHPSTLIRIAKKLGY 58 Query: 61 KGFPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ LK + + S+ + D + V K+ N + TL++ + Sbjct: 59 SGWVELKNSFLGEIEYLNSHFSSIDANYPFDDRDSIMTVANKMALLNQTTISDTLSLLNH 118 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASS 178 + L ML A I + + + L+ +F K+ +IG + + D H S+ Sbjct: 119 DDLQRATNMLDEAAHIKVFSMYHNLLICHDFKSKMNRIGKHVSLCTVDPHF---EAVNSN 175 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT- 237 + + ISY+G ++ + R V+A+T N L + A L E+ Sbjct: 176 TETCAIVISYSGESEDIVGRLPFLKRKKVPVIALTSIGENTLTKYADCILRITTREKLYS 235 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 S S+ + L DLL+ + +D + E Sbjct: 236 KIGSFSSNESICFLLDLLYACVFSEDYKNNLEYKIRISK 274 >UniRef50_C2HCM3 RpiR family transcriptional regulator n=12 Tax=Enterococcus faecium RepID=C2HCM3_ENTFC Length = 300 Score = 214 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 46/273 (16%), Positives = 116/273 (42%), Gaps = 4/273 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M +I++ + S+ ++ +LL ++ Q++A V S++++ A+K+G+ Sbjct: 1 MLLREKIKEI--SFSPSENEVIQFLLSDSPALGEMTIQEIAERCYVHPSTLIRVAKKMGF 58 Query: 61 KGFPALKLA-LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ + + A L+E + V + D + + K+ + TL++ Sbjct: 59 DGWVSFRNAFLAETAYLEGNFQDVDANLPFSTTDGIMTIANKMASLEQMTIQDTLSLIHH 118 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++L + ++ A++I++ ++ L++Q+F K+ +I + V + Sbjct: 119 DQLQKAKQLMLQAKKIVIFASNSNTLISQDFMLKMKRIKMDVTIVTTFGESFYEAYNCTS 178 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-N 238 D + ISYTG + A+ + + +LA+T + L ++ L E+ Sbjct: 179 DMCGILISYTGENNVILRTAEILKQNHVPILALTSIGDSTLSSMSTAALRLTTRERLYSK 238 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERI 271 + + + L D+L+ + ++ + + Sbjct: 239 IGNFTINTSICYLLDVLYSCVFAENYQQNLVHL 271 >UniRef50_B4SHK0 Transcriptional regulator, RpiR family n=3 Tax=Stenotrophomonas RepID=B4SHK0_STRM5 Length = 282 Score = 214 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 90/282 (31%), Positives = 142/282 (50%), Gaps = 4/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M LL+IR ++ ++++AD++L R SSQQLA+ G+SQSSVVKF+QKLG+ Sbjct: 1 MPPLLKIRSERGQMSAIERRIADFILDNAHLLRDYSSQQLASALGISQSSVVKFSQKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG+P LK ++ + +A P GDD LR +GE L + A T N E Sbjct: 61 KGYPDLKYSIGQDVARAGADPQQAPSEPDSGDDYLR-LGEALRRSKAQAEEETRQANPRE 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ V +L A ++ + G+G GL A+ FA +L +G D +LA + A+ P Sbjct: 120 EIERIVQLLDGAPKLFVYGLGDDGLYAREFAMRLSLLGLLVVPHTDPILMLANLSAARPG 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+LL S G +L+ + + +GGKV++IT T N L+ A L A ++ A Sbjct: 180 DVLLMFSEFGNLPQLSQLSRQFQDMGGKVISITRHTANPLRAHADAALAVCAHDRTPQVA 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPE---RIRHSEALVK 279 + A L D LF+ L + + + + + L+ Sbjct: 240 QLLYRSAMHALLDFLFVLLCHANPDRQQQLAVNLERIDHLLD 281 >UniRef50_C5RF15 Transcriptional regulator, RpiR family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RF15_CLOCL Length = 289 Score = 214 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 52/281 (18%), Positives = 121/281 (43%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN ++ + L +++K L Y+ P+ +S+ ++++ +S S++ + QKL Sbjct: 1 MNIFSKLN-KLTNLTENEKTLVSYMQDNPEGFVKMSALEISDACFISTSTIYRLCQKLDL 59 Query: 61 KGFPALKLALSEALASQ-PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G LK+ +S ++ E S+ + I+ ++ + KL + + ++LN+ Sbjct: 60 SGLSELKVQISLSINEYLKEQSSLDYNYPIKQNETQHQIVLKLKELYEQTLVSSLNLIDL 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E+L +L++A+ I + +NF +++ +IG + + L T S Sbjct: 120 EQLRLIANVLKNAQHIDFYTSAGNMYFVENFKFQMQEIGTFINVPIEEYHQLLTASTSDE 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN- 238 + + + +S+ G + AD + ++ I+ N L + A++ LY + E N Sbjct: 180 NHIAIVVSFEGRGVIIKRIADMLKVNKTPIILISSTNENPLTKYANYHLYLSSNENHFNK 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +S S + + D L+ + + ++ + Sbjct: 240 ISSFSTRLSLLYVLDCLYTCYFNLNYDKNVSYKLNAYKKLS 280 >UniRef50_B1QVU2 Transcriptional regulator, RpiR family n=9 Tax=Clostridiales RepID=B1QVU2_CLOBU Length = 275 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 45/277 (16%), Positives = 110/277 (39%), Gaps = 14/277 (5%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + +I Y+ +K +A++ + + SS+ ++ + VS++++ +F++K G+KG Sbjct: 8 IIPKIESLYENFTPLEKTIANFFIHNTEKI-DFSSKNISKKLFVSEAALSRFSKKCGFKG 66 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + + +P + + ++++ + + + EE++ Sbjct: 67 YREFIFLYEQNFVEKPSNVTTNYT-------------KQVLDTYQELLNKSYALLDEEQM 113 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + +R+ + G G+S L AQ + M+IG N ++ D H + + D L Sbjct: 114 VRITKLFNQKKRVYVYGRGSSALAAQEIKLRFMRIGVNIESIVDSHIMKMNFVLLNSDCL 173 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ IS +G E+ + + IT ++ + +E N +I Sbjct: 174 VIGISVSGKTDEVLDSLRAAKSRNATTVLITSRKEKEFEEFCDEIILLAVKEHLDNGKAI 233 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S ++ D+ + +Q D E ++ + Sbjct: 234 SPQFPILVMVDIFYAHFLQSDKFHKQELHDYTLNALH 270 >UniRef50_C0Q155 Protein rpiR n=2 Tax=Salmonella enterica RepID=C0Q155_SALPC Length = 293 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 116/274 (42%), Gaps = 5/274 (1%) Query: 8 RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALK 67 + L + ++ +A ++ P T ++S +A+ VS SS+ K ++KLG+ GF LK Sbjct: 15 KTLAPELGKKERAIARFIHDNPQTLSNMSITDIAHYLKVSVSSITKVSKKLGFTGFHDLK 74 Query: 68 LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 L++S+ + + ++ +P+ + + + E + + A+ LNV + Sbjct: 75 LSISKNINNNEDTVDIPVIPD--SEGFIEKIFESTLLNSILALQEALNVIDCSIIKSVAW 132 Query: 128 MLRSAR---RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 + +I + G G S + +F KL+KIG + D H L + D+LL Sbjct: 133 LFIHKNAEAKIFIAGCGGSASICDDFNHKLLKIGIFSTVFSDSHKQLMSASLMRQGDILL 192 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 A+S++G ++ + G + + +T + + L H + + + + + Sbjct: 193 AVSHSGQTSDIIQMVNIANERGAETICLTNYPNSPLSLICRHSIISAVKNNPITGENATT 252 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + D +F + + E+ + + V Sbjct: 253 RIVHLNILDAIFTIIASKTSEITKNSLLSTRNAV 286 >UniRef50_Q88UA4 Transcription regulator n=1 Tax=Lactobacillus plantarum RepID=Q88UA4_LACPL Length = 287 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 60/281 (21%), Positives = 121/281 (43%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + ++ ++ ++A Y+L D ++ ++LA + S S++++ AQKLG+ Sbjct: 1 MQLIEQL-SHRSDFTTTETRIATYILSHQDAMPNILIKELAAKTYTSHSAIIRLAQKLGF 59 Query: 61 KGFPALKLALSEALA-SQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 GF + AL+ + + + +V + D + + +K+ T A+ + Sbjct: 60 HGFRDFQRALTTEIVINTQATTNVDANFPFTDKDAVTEIIKKMADLKTNAIANAQHQLRP 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E L + +L AR I+L G S L A++F KL+KI A + + +P Sbjct: 120 EVLTKSAYLLNKARHIMLFSQGDSQLRARSFQNKLVKINRFAQIAEMYADEAWNIASLTP 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-N 238 D + ISY G A V+ +TG + LQQ A++ L E+ Sbjct: 180 QDCAMFISYAGNTDVHQRFAKYCQAHHIPVIVLTGNVDSPLQQFATYQLVITQNERNNAK 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + ++ + + D LF + + + ++ ++ L++ Sbjct: 240 LGTFASQVSFDYVLDTLFAIMYANNFQTNLAHLKTTQLLIQ 280 >UniRef50_B0NFU9 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B0NFU9_EUBSP Length = 285 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 62/280 (22%), Positives = 128/280 (45%), Gaps = 14/280 (5%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L I+++Y + +++K+AD++L P A + +LA ++GVS ++VV+ +GY G Sbjct: 14 VLEVIKEQYDYIFSAERKVADFVLQNPQKAVDSNVSELAKQSGVSDATVVRMCHHIGYTG 73 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + +++L+ L + S + R EKL +E M A + + + Sbjct: 74 YYQFRISLARDLGKKQYGSSALAES--------RDAVEKLFQEYAQTMLAIGSRIDADVM 125 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 CV +L++ + + +G + +AQ ++L ++G + + V + DDL Sbjct: 126 WNCVNLLKTCKEAHIMAVGNTCPLAQYMGFRLGRLGIKSTYNVAAEYFMNHVNLADQDDL 185 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L+AIS +G R++ + G K +AIT F + + A + L + +E+ + Sbjct: 186 LIAISQSGTSRQVIQGLELGKEKGLKSIAITAFAQSPVSNLADYVLLSAGKEEPFSFYKG 245 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 A + + D L + E I+ ++A +++ Sbjct: 246 YAHMNETAVIDALL------NFVTNEELIKTTQADKPEMI 279 >UniRef50_A6LS27 Transcriptional regulator, RpiR family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LS27_CLOB8 Length = 288 Score = 214 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 56/274 (20%), Positives = 115/274 (41%), Gaps = 5/274 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + L +++K LA+Y+L + +S +LA + S S++ + +K+G Sbjct: 1 MTIYNLLL-YANNLTETEKLLANYILENQEQVAGMSLDELAKVSFSSISTIHRLCKKIGL 59 Query: 61 KGFPALKLALSEALASQPESP-SVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 GF K+ E L S+ P ++ I+ + DD + + + + T + + Sbjct: 60 TGFKEFKIKFVEELYSKMNKPENIDINFPFKKDDTQFQIASNIKQLYIDTLTNTFSFFNS 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF--NAAAVRDMHALLATVQAS 177 E+L + V ++ +A + + + + A NF K+ IG N + + A + Sbjct: 120 EQLEDAVDLIYNAEIVDVYAVTNNIQTALNFQDKMQSIGRYVNVSLIPMNQVYRAAASNN 179 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 + + +SY+G E+ A + R + L I N L + + ++ ++E Sbjct: 180 KNKQVAIILSYSGKTPEIKEIALVLKRKEIETLVICSAQENYLTKLFKYHIFVSSKENLK 239 Query: 238 NSAS-ISACHAQGMLTDLLFIALIQQDLELAPER 270 S S+ A + D++F + +D E E Sbjct: 240 KKISHYSSHIATQYVLDVIFSCIFNKDYEKNMEY 273 >UniRef50_C6JFN2 Transcriptional regulator n=3 Tax=Clostridiales RepID=C6JFN2_9FIRM Length = 275 Score = 213 bits (544), Expect = 5e-54, Method: Composition-based stats. Identities = 54/281 (19%), Positives = 107/281 (38%), Gaps = 14/281 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + I Y ++ +AD+ + + + SS+ ++ VS++S+ +FAQK G+ Sbjct: 7 KIIPLIESYYHTFTPLERTIADFFIHNTEE-QDFSSKNISGLLYVSEASLSRFAQKCGFH 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ ++LA PE + + + + + Sbjct: 66 GYREFIYEYKQSLAPGPEENIPNFEVSE-------------FNTYQELLNKSNALLDKAQ 112 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + +L S R+ + G G+SGLVAQ + M+IG N AV D H + + Sbjct: 113 ITRITNLLVSKPRVYVYGRGSSGLVAQEMKLRFMRIGLNIEAVTDSHIMKVNSVILDENC 172 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++ IS +G ++ + + G L +T + Q L + E Sbjct: 173 LVIGISVSGQTDDIISSLKAAHQHGAYTLLMTARQDKSYQDFCDETLIFASMEHLEYGNI 232 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 IS ++ D+L+ +Q D ++ ++ + Sbjct: 233 ISPQFPILLVLDVLYAHYLQIDRSKKEALHEYTIQTLQPFL 273 >UniRef50_C3RR03 Sugar isomerase n=2 Tax=Bacteria RepID=C3RR03_9MOLU Length = 298 Score = 213 bits (544), Expect = 5e-54, Method: Composition-based stats. Identities = 57/272 (20%), Positives = 115/272 (42%), Gaps = 4/272 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M +I + L+QS + +ADYLL + + ++ ++LA S ++++ A+KLGY Sbjct: 1 MLIEQKIERAR--LSQSQQLIADYLLEKRSNIKDMTIKELAVATYTSTGTIIRLAKKLGY 58 Query: 61 KGFPALKLA-LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ K L E ++ + D ++ + K+ + TL + Sbjct: 59 HGYEDFKADFLKEVYYLDTHFKNIDPNFPFVKTDNIQKIASKVTLLAQETLSDTLALLEH 118 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L + + +++ A +I L I S L+ Q F +++IG N L Sbjct: 119 DNLQKALRIMQKANQIHLAAISYSLLLGQIFKLDMLRIGKNVNICNTNGEELFLPAVIKN 178 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +D ++ ISY+G L A + ++AIT N L++ A L+ E+ + Sbjct: 179 NDCIIIISYSGEIHNLCSLARTLKGRSVPIIAITSLGDNELKKYADVVLHISTREKLYSK 238 Query: 240 ASISAC-HAQGMLTDLLFIALIQQDLELAPER 270 + + ++ ++ D+L+ + R Sbjct: 239 IAGYSNENSIKLILDILYSCYFNLMYDDNLAR 270 >UniRef50_B0MBA6 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0MBA6_9FIRM Length = 286 Score = 213 bits (543), Expect = 5e-54, Method: Composition-based stats. Identities = 59/260 (22%), Positives = 119/260 (45%), Gaps = 12/260 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L I YQ L +K++ADY+ PD ++ QLA +G S+++VV+ + LGY+ Sbjct: 6 NVLDSIDNLYQQLFSKEKQIADYIKDHPDEVVMMNVSQLAKASGTSEATVVRTCKHLGYQ 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ L+L LS + ++ + + N + + S++ Sbjct: 66 GYYQLRLILSRDIGTKSNDIGIDADTDF---------VSYTFERNIQNLRNLSSNLSKDV 116 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L +C +L A + + G + +A + +++L + G + + L V S +D Sbjct: 117 LLQCALILLKAPAVHIIATGNTTPIALDLSFRLSRFGVQSFSSSISEYYLNNVSLGSKED 176 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++AIS +G +++ AAD +G +++IT + + L + + H L + +EE + + Sbjct: 177 VVIAISGSGTSKQVLQAADIAKDIGMTIISITSDSDSPLARVSDHIL-SSSEEHPLFNET 235 Query: 242 IS--ACHAQGMLTDLLFIAL 259 + + D L A+ Sbjct: 236 KEPLSHLCSMAICDTLLYAV 255 >UniRef50_A6M2X4 Transcriptional regulator, RpiR family n=4 Tax=Clostridiales RepID=A6M2X4_CLOB8 Length = 286 Score = 213 bits (543), Expect = 6e-54, Method: Composition-based stats. Identities = 65/281 (23%), Positives = 126/281 (44%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I+ L Q++ LA Y++ + LS QQL+ + VS+S++ +F +K+G Sbjct: 1 MTIENMIKCC-DKLTQTENILAQYIIKNKNEISTLSIQQLSEKTFVSKSAIHRFCKKIGV 59 Query: 61 KGFPALKLALSEALASQPE-SPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 GF LK+ +++ +A + + + ++ D ++ +KLIK + T Sbjct: 60 DGFNELKVKVAQDIAEESKIENDIDVNFPFLEGDTQGVIAQKLIKLYETTIRDTYKYIDV 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 EKL+ CV++L A I + + VA+NF K+ IG + + T AS Sbjct: 120 EKLNTCVSILHKADVIDIYTHAHNSNVAENFMDKMRSIGRMVNCTKSFYDQRCTATASKK 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA-TN 238 + L +SY+G L ++ + + G + + I +++ + H LY E Sbjct: 180 NHAALLLSYSGKSNFLKPISEVLYKRGIETIWIGRVGSSSVPEYIKHRLYISDRENFKNR 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + S+ A + DL++ + ++D + I+ +V Sbjct: 240 ISQFSSHIAMQYMLDLIYSCIFKRDYNDNIKYIKEIANIVD 280 >UniRef50_B0NJ36 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NJ36_EUBSP Length = 277 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 121/269 (44%), Gaps = 10/269 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I++ Y+ + +++K+AD +L P+ + ++LA +GVS+++VV+ Q GY Sbjct: 5 SVIDNIQKHYREFSPTERKVADCVLRHPNQVTEYTVKELAMASGVSEATVVRMCQHAGYT 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + L+ + + D+ + + ++ M + + Sbjct: 65 GYWPFRTMLARDMGMMGREE--------KRDNDQANIVAGIFRKYADIMQNLSSKIDLDA 116 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + C ++ + + + G +G +A++ + L +IG A L T+ + +D Sbjct: 117 MSTCARLIDNCHEVHVIAAGDTGTLAKHMGFCLGRIGIKATYSGLADYYLNTINLADEND 176 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L+AIS +G+ + + A+ G KV+AIT + + L + A H L + + + Sbjct: 177 VLIAISKSGITKTVIQGAELAKEKGLKVIAITEYGNSKLGELADHVLLSKGDSSRFDYYK 236 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPER 270 ++ + + L + ++++ E+ Sbjct: 237 NYNHLSETAVIEALLELV--KNVDKIVEK 263 >UniRef50_A6UIG8 Transcriptional regulator, RpiR family n=8 Tax=Rhizobiaceae RepID=A6UIG8_SINMW Length = 287 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 55/277 (19%), Positives = 104/277 (37%), Gaps = 7/277 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ +++ L+QS+ ++AD LL + A + S +LA +A VS +V +F ++LG Sbjct: 1 MDIFATLQEEKGRLSQSENRIADILLNDFEFAVNASIIELAGKADVSPPTVTRFCRRLGC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + F K+ L+ + V + +I + A+ Sbjct: 61 ESFSDFKVQLAR-----TPYVGMRYLKPEPKSQEPGDVAQDIITKAQNALLLLHRSLDLA 115 Query: 121 KLHECVTMLRSARRIILTGI-GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L A I G G S ++A F +L ++G + D + A+ P Sbjct: 116 AIERAADQLAQAEMIYAFGSGGNSSMIAGEFQNRLFRLGMRITSSSDHSMQMMMAAAARP 175 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+++ S++G EL A +A+T + + Q A + E Sbjct: 176 ADVIVGSSFSGRNAELVRAFILAREAKVPTIALTQSG-SPVAQAADITVPVDLPEGNNIY 234 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 S A L D++ + + A +R + Sbjct: 235 RPTSTRIAYLALLDIVASLVAYRVQPQATVTLRRIKQ 271 >UniRef50_Q4L9T6 Similar to transcriptional regulator n=2 Tax=Staphylococcus RepID=Q4L9T6_STAHJ Length = 268 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 63/278 (22%), Positives = 118/278 (42%), Gaps = 16/278 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M RI++ L + DKK+ +Y+ + LA G S +++ +F+ KL Y Sbjct: 1 MKFENRIQRSRHVLTKMDKKIIEYIQTHELDENFSTINSLAYAIGTSPATITRFSGKLNY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F +K L + + + + + + + + + T SEE Sbjct: 61 ANFQDMKFNLQHEKSEKVVENAP--------------LVQLIHRYHQNIIQQTGEFISEE 106 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 K+ L++ R++ G+G+SGL A F ++ M++G + D H + + S Sbjct: 107 KIKRLAHNLKTCRQVNFAGLGSSGLTASEFYYRTMRMGIKGSVSTDAHQMKISASLLSSR 166 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ +AIS +G EL AA G V+ IT F +AL + A L T A+ +S Sbjct: 167 DMFVAISNSGETLELIEAAKIARNQGAYVVVITNFEGSALTKNADLVLITTAQSSNNDSK 226 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 I++ A L D+ ++ + + + + ++ Sbjct: 227 FINSQIATLFLLDI--VSYLLLNDTHMHHVYQQTRDVI 262 >UniRef50_A8FIJ8 RpiR family transcriptional regulator n=2 Tax=Bacillus pumilus RepID=A8FIJ8_BACP2 Length = 283 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 118/281 (41%), Gaps = 7/281 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + +++ + L + +++ADY++ P L+ +LA++ G S +++++F+ +GY Sbjct: 3 DLIHKLQHKVVELTDAQRRIADYIVQHPMEVAFLTVDKLASKVGTSTATIMRFSAAVGYS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF + L A+ + + + + ++ + L+ +EE Sbjct: 63 GFSEFQKELQSAMKHKADPQTRL--EANLKHSNKSQLLHNHVELQFQNIQYALDNITEET 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSPD 180 + V + SAR ++ T + + V + ++ + ++ N + D + + + Sbjct: 121 FQQIVGKIASARHVLCTSVRSGRPVGEYMSFGINRLLGNCQYIDADQSDWVDDLVHFNSG 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D ++A+SY + + + G +VL IT + L + A + L + Sbjct: 181 DFIIAVSYPRYAKRMKDLMEAAKSYGVEVLLITDSYSSPLTKYAQYVLPCSSASV----G 236 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S ++ + + D + AL D E R+ ++ K+ Sbjct: 237 SHNSVVSAIFIVDFILSALAMNDPERTKPRLDQINHMLTKM 277 >UniRef50_Q0STT6 Transcriptional regulator, RpiR family n=14 Tax=Clostridium RepID=Q0STT6_CLOPS Length = 291 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 59/279 (21%), Positives = 122/279 (43%), Gaps = 7/279 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I+ ++ L++ K +A+Y+L D A +++ +L N GVS+S+VV+FA +LG+ Sbjct: 5 DLMRLIQVKFPKLSKGQKLIAEYILKNYDKAAFMTAAKLGNNVGVSESTVVRFATELGFS 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L+ AL E + ++ S + ++K + + ATL + + Sbjct: 65 GYPKLQKALQELIKNKLTSVQRL--ELSNDFISEENALKGVLKADIENIRATLEKINHKT 122 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSPD 180 E V + A+RI + G+ +S +A+ + L I N + + + Sbjct: 123 FDEVVNEIFKAKRIYIIGLRSSTALAEFLGFYLNLILDNVRVISNGISDTFEQMLNLGEG 182 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++ I + + A + K+++IT + L ++ H L + + Sbjct: 183 DLVIGIGFPRYALKTIDALEFAKTRNAKIVSITDSLISPLASQSDHTLIAQSNMASF--- 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + + A + + L IA+ ++ E E + K Sbjct: 240 -VDSLVAPLSVINALIIAVGIREKEKITSTFSELEKIWK 277 >UniRef50_A6M3B1 Transcriptional regulator, RpiR family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M3B1_CLOB8 Length = 247 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 104/262 (39%), Gaps = 17/262 (6%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I + + L +++ L Y+L + ++ Q L+ E S +++V+F KL Y Sbjct: 1 MTIFDTIEKNRKFLNKNENYLLKYILENIEKVSNMRIQDLSKETFTSTATIVRFCNKLSY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ K L ++ + + + + D + T ++ ++ Sbjct: 61 SGYSEFKANLRNSIDRENNHKKISDNMFLFDD-----------------IAKTKDLINDS 103 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + E ++++ A +I G G+S V + + K + N D + +T Sbjct: 104 LIDEVISIIHDAEKIDFYGEGSSKDVCIDISRKFHLVEKNCRYFNDSSIMYSTASDLDSK 163 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 L++AIS +G ++ A + G K++ +T N L + CL+ + E NS Sbjct: 164 TLIIAISMSGETSQVIKAVNIAKTRGCKIICVTSVGYNTLANLSDKCLFIFSSEYEINSI 223 Query: 241 SISACHAQGMLTDLLFIALIQQ 262 + + + +F + + Sbjct: 224 KFKSRVTANAIMEYVFFRYLDK 245 >UniRef50_A5IPI4 Transcriptional regulator, RpiR family n=54 Tax=Staphylococcus RepID=A5IPI4_STAA9 Length = 266 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 124/278 (44%), Gaps = 16/278 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M R+++ ++DK++ +Y+ + + LA+ G S +++ +F+ KL Y Sbjct: 1 MKFENRVQRYQHLFTKTDKRIVNYIRQNGYSDAFSTINSLAHAIGTSPATMTRFSHKLDY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + F LK + + + S + +++ K + + T + Sbjct: 61 ENFQDLKFNIQQEMTETVIENSP--------------IIQRIHKYHQQIIQQTGEFIDND 106 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + L+S+R I+ G+G+SGL A F ++++++G D H + + S Sbjct: 107 IIQTFIDKLQSSRHILFAGLGSSGLSATEFYYRMIRMGLKGNVTTDSHLMKISASLLSHS 166 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ +A+S +G EL AA+ G V+AIT F + L A L T + + T+ Sbjct: 167 DMFIAMSNSGNTSELISAAEVAKSHGAYVVAITNFEGSKLTDCADLVLLTTDQSRNTDHQ 226 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 I+ A L D++ L++ + +H+++++ Sbjct: 227 FINTQIATLFLIDIVSYHLLENT--NLSQTYQHTKSII 262 >UniRef50_C0BYY2 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BYY2_9CLOT Length = 280 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 62/272 (22%), Positives = 114/272 (41%), Gaps = 11/272 (4%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 + +++AD L+ + + S +A ++ VS +SV +F Q LGYK F A + +L E Sbjct: 2 HFNPAMRRIADILITDTQSLLNCSIGDIAEKSNVSAASVTRFVQILGYKNFKAFRQSLQE 61 Query: 73 ALASQPESPSVPIHNQIRGDDP-LRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 L + + SV + + +I+ + TL++ + + + S Sbjct: 62 YLLAGQDQLSVTSSEIAMSESSAPESICNYVIQSEIEMLRDTLSLMDFPTMDKVAKKICS 121 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGV 191 AR +I G G S + AQ+ + ++G + D H++L + + P+DL++ IS G Sbjct: 122 ARHVIFIGEGRSYIAAQSACNRFDRLGILCSCYGDPHSMLPAIGMAQPEDLIVGISNFGH 181 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT-------IAEEQATNSASISA 244 R + G +AIT + L Q+A + T + + +S Sbjct: 182 SRPVVNCIKYAREHGVPTVAITSSQDSPLAQQAESLIITGFNYNNLANQGEIICYEPMSE 241 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 Q L D L+ LI + + ER+ Sbjct: 242 NLPQFSLIDCLY--LIAGNY-QSKERVNRYYE 270 >UniRef50_UPI000196B4B9 hypothetical protein CATMIT_00397 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B4B9 Length = 290 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 57/270 (21%), Positives = 117/270 (43%), Gaps = 2/270 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + I + + + S++++ADY+L + R SS+ +A++ ++ S + +F QKLG+ G Sbjct: 1 MIEDILKEKKNMTSSEERIADYMLEKKTLLRKQSSRSIASQLFINPSMITRFCQKLGFHG 60 Query: 63 FPALKLALSEALA-SQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + + + ++ ++ ++ D ++ K+ + + TL + S + Sbjct: 61 YTDFLEEYLKEIEYTESHFQNLDPNHPFDNQDKNTVIANKIGQLYHEIVDDTLKLISHDA 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + L + I + G G VA+ F K++KIG N M+ L + Sbjct: 121 LQNAINCLNKSDIIYVYSAGVQGDVAETFKDKMLKIGKNVVLETKMNELYYRASYCPLNC 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA-TNSA 240 + ISY+G ++ +LAIT + N L Q A + L E+ N Sbjct: 181 TFIIISYSGEIETELRGVKKLKERHIPLLAITSYGDNTLSQYADYILNVSTREKLKDNLG 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPER 270 + + ++ D+L++++ D ER Sbjct: 241 DFAMNISTMLILDILYVSIFNTDYSTHVER 270 >UniRef50_B9Y3J7 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3J7_9FIRM Length = 274 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 51/282 (18%), Positives = 112/282 (39%), Gaps = 14/282 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ +I+ Y +S++++A Y L + QLA +A +++VV+F +K+G Sbjct: 1 MSIYSKIKDNYDVFTKSEQRVAKYCLDNYTEVAGNTLSQLAEKAHCGEATVVRFCKKIGN 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + + K L+E +S + ++ + ++ T+ E Sbjct: 61 ESYHDFKEELTEETQEHLKSEN-------------DSFVTQIYQNLRTSIEYTIQNLDLE 107 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ E ++ A I G+G SG+ A+ A +L++ G N +D H + Sbjct: 108 QIDEIAQLMNKADIIFCAGVGNSGIPAEACAMRLVRNGKNGIYFKDNHFQSIYLNELKRS 167 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ + S +G + A+ + + K + +T ++L +C+ Sbjct: 168 DIAILFSASGESNDTIHCAEILKQRKVKTVCVTSSVVSSLAVLCDYCILLKRWLGPLGGG 227 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHS-EALVKKL 281 S+ Q + DLL D + + + + ++ K+ Sbjct: 228 SMIGQITQMYIADLLSTRTGMIDQKTTLKAKETTFDYIIDKM 269 >UniRef50_C3RJC3 Sugar isomerase n=5 Tax=Bacteria RepID=C3RJC3_9MOLU Length = 291 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 51/269 (18%), Positives = 115/269 (42%), Gaps = 2/269 (0%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 + S++ + D++L + + + S+ +A E S S +V+ ++KLG+ G+ K A E Sbjct: 5 KFSPSEEIVIDFILTKQERIKDYSTTMIAGETYTSPSLLVRISKKLGFSGYNNFKNAFLE 64 Query: 73 ALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 + ++ + D + + K+ + T ++ TL++ + L + V L+ Sbjct: 65 EVQYLHKSHLNIDANQPFLKTDSIMNIANKITQLKTESLNDTLSLIHHDTLQKAVRALQK 124 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGV 191 + + + G+ A+ F +KL IG NA + ++ +DL + +SY+G Sbjct: 125 SNTVKVFGVSNLSFPAEEFVFKLRHIGKNAEVFVLNSNIYQEAMMANSNDLGICLSYSGE 184 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-NSASISACHAQGM 250 E+ A+ + + ++AIT N+L + A L E++ + S+ + + Sbjct: 185 SGEIIKIANILKKKNVPIIAITSIGENSLTRLADIVLRVTTREKSYSKIGAYSSLESISL 244 Query: 251 LTDLLFIALIQQDLELAPERIRHSEALVK 279 + D+L+ + + Sbjct: 245 ILDVLYSCFFTTAYDQHYTFKTELAKNTE 273 >UniRef50_C3RM54 Putative uncharacterized protein n=2 Tax=Bacteria RepID=C3RM54_9MOLU Length = 273 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 51/278 (18%), Positives = 120/278 (43%), Gaps = 16/278 (5%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I Y+ L +K +A+Y + Q + LSS+ ++ VS++S+ +FA+KLG+ Sbjct: 7 SVIPIIESAYEELTNVEKNIANYFIDQVED-EDLSSKAVSQRLYVSEASLSRFAKKLGFS 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ A ++ S L L+ ++++ + T ++ ++ Sbjct: 66 GYRQFLFAYQDSHQSSRH---------------LDLLTKQVLNSYQKVLEKTYSLIDNDQ 110 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + ML R+ + GIG+S +VA+ F + M++G + + + H++ + + + Sbjct: 111 MVRIAKMLDEYNRVYIYGIGSSSVVAREFKLRFMRLGLDVDYLAESHSIRMNITRVNQES 170 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++ IS +G E+ E G K + ++ + + + S Sbjct: 171 LVIGISVSGKTEEVIEGLREAKEKGAKTIMLSAARVYEYRSYYDELILIGGLKNLAISDK 230 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 IS ++ D+L+ + + + E+++ + + Sbjct: 231 ISPQIPALIVVDILYSHYLNYNNDNKKEKLQMTLEHIN 268 >UniRef50_B9DVM9 RpiR family regulatory protein n=2 Tax=Streptococcus RepID=B9DVM9_STRU0 Length = 295 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 50/281 (17%), Positives = 114/281 (40%), Gaps = 4/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M +I + S++K+ D++L + + S+ Q+A E S+S++V+ AQKLG+ Sbjct: 1 MFINEKIE--LSAFSPSEQKVVDFILKEKEHISEWSTSQIAKETYTSKSTLVRIAQKLGF 58 Query: 61 KGFPALKLALSEALASQPESPSV-PIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ + + A E + + + D + KL + TL+++ Sbjct: 59 SGWTSFRQAFHEEVTYLLKQADAHDANLPFDKTDNNLEIASKLAHLKKEVIDETLHLSRN 118 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L++ + ++ AR + L + + FA + +I + + + Sbjct: 119 KDLNKAIHLISHARTVHLFAASNNLHNGREFAHNMKRIQKDVQLHDLHGEIHFDALLAEE 178 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-N 238 D + ISY+G L A + + ++A+T N + Q + L +E+ Sbjct: 179 DSCAIIISYSGGTLSLIKVAQILRKKEIPIIALTSLGDNPISQLSQVTLRLSTKEKLYSK 238 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + + + + DLL+ +Q+ + + + ++ Sbjct: 239 IGTYATDTSITFILDLLYSIYFRQNYDYNLAFRQKTSQEIE 279 >UniRef50_A6BIK8 Putative uncharacterized protein n=9 Tax=Clostridiales RepID=A6BIK8_9FIRM Length = 315 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 60/280 (21%), Positives = 114/280 (40%), Gaps = 8/280 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L I +RY ++ KKLAD++ D A L++ ++ E GVS+S+VV+FA LGY G Sbjct: 18 LLKMIDERYHKFSKGQKKLADFIREDYDKAAFLTAAKMGGEVGVSESTVVRFATALGYDG 77 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 +P + AL E + + S G + ++ + + T+ E Sbjct: 78 YPEFQKALGELVRMKLNSIQRM--EVTYGRISQGEILTSVLHSDIEKIKLTMEAIDHEAF 135 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD--MHALLATVQASSPD 180 V + A+RI + GI + +A ++ L I N AV + + S D Sbjct: 136 EMAVDTILKAKRIYVIGIRSCSPLASFLSFYLNLICENVTAVNTNSSSEIFEQLIRVSED 195 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ IS+ A + V+ +T + + +S L ++ + Sbjct: 196 DVVIGISFPRYSMRTLKALEFASNRKATVITLTDSVHSPMTLYSSCNLIARSDMASI--- 252 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + A + + L +AL + + + E + + Sbjct: 253 -VDSLVAPLSVINALVVALCMKKQKEVITTLETLEQIWDE 291 >UniRef50_UPI0001BC58DB RpiR family transcriptional regulator n=1 Tax=Fusobacterium sp. D12 RepID=UPI0001BC58DB Length = 283 Score = 210 bits (535), Expect = 5e-53, Method: Composition-based stats. Identities = 56/284 (19%), Positives = 123/284 (43%), Gaps = 9/284 (3%) Query: 1 MNGLLRI-RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 MN L + ++ Y L + +KK+A+Y + P LS+ +L E GVS +S+++F++ LG Sbjct: 1 MNKLNQFYKEHYNTLTKGEKKIAEYFVKNPKKVMMLSALELGKEIGVSDASILRFSKALG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 ++ F LK ++ +P+ + + K++ + + L Sbjct: 61 FQKFSDLKNYIAS--GFSTITPNDRMVKNWDNFHSQNDIVNKIVNSDLENIKEFLLHIDF 118 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATV-QASS 178 E++ V + A++I GIG+S ++Q W + ++GFN + + L + Sbjct: 119 EQIETVVNWMNKAKKIYFLGIGSSRAISQFMFWHMKRLGFNTECINEGGLGLYEAFSHIT 178 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D+++ S+ + + G K++ +T + + + L T E N Sbjct: 179 KKDIVMLFSFPRFLNDEVKSITLAKEQGAKIITVTSNPFSEISFLSDMVLETFVE----N 234 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 ++ L +++ A+ +++ E ++ +LVK + Sbjct: 235 DGFFNSYMVPMELCNIMLTAIFEKNKESIFTELKK-NSLVKDFL 277 >UniRef50_D1TJG3 Putative transcriptional regulator, RpiR family n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TJG3_9BURK Length = 325 Score = 210 bits (535), Expect = 5e-53, Method: Composition-based stats. Identities = 64/279 (22%), Positives = 116/279 (41%), Gaps = 7/279 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + RI + L +++K+A +L A S LA +A VS ++V +FA+ +G + Sbjct: 40 DIVARIAECAPELRSAERKVAALILDDLTGASRASIGALAQQAEVSIATVTRFAKAVGCR 99 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 LKL L++A A D + ++ E A+ + + Sbjct: 100 DVRELKLRLAQAAAVGQRFLERDA-----ASDAPEPIATRVFDELQTALAHNHQLLRQAP 154 Query: 122 LHECVTMLRSARRIILTGI-GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L E LR+AR I + G+ G S +A ++L+++G A +D S D Sbjct: 155 LAEAAAALRNARMIYVFGMGGGSTALADEMRFRLVRLGRPVATYQDGLLQRMVASTVSRD 214 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +++A+S TG E+ G V+A+T + L + A + +A E Sbjct: 215 CVVVALSTTGRVPEMVENCKIARSYGATVVAVTA-PASPLARLADWLIPIVAFETDFIYK 273 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S+ +A M D+L L + + E +R + + Sbjct: 274 PSSSRYAMMMALDVLVTELAVSQGDESRELLRRMKHALD 312 >UniRef50_C0DAS9 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DAS9_9CLOT Length = 290 Score = 210 bits (535), Expect = 5e-53, Method: Composition-based stats. Identities = 62/275 (22%), Positives = 117/275 (42%), Gaps = 7/275 (2%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 + RI+ +Y L++S K++A+Y+L + H S +A + G S+V +F Q L YKGF Sbjct: 17 IGRIKMQYASLSKSQKRIANYILNHREAVIHHSITTMAQKTGTVPSTVTRFCQALSYKGF 76 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 +K+ + + LAS + + I+ D L++V +KL+ + A+ T+ L Sbjct: 77 SEMKVYMEKNLAS-----PLTMDALIQKTDTLQVVLQKLMNSSQNAIQDTMRTLDARSLT 131 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 E V + +A I+L G + A L++I + AV D D+ Sbjct: 132 EAVDAILAAGNILLFGQSGGYISATYARQLLLRINVLSQAVNDRVDANLAASTLKKGDVA 191 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + +Y+G R + A + IT T + + + A L+ Sbjct: 192 IGFAYSGEARSVIEALTTAKHNKATTIVITANTNSTMAKLADLKLFYSYNIPDDLQYLHL 251 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 A + M+ + ++++ + E+I + V Sbjct: 252 ASMCEIMIIGAIQAEILRR--PMQLEKIDACKKAV 284 >UniRef50_B9Y4Q7 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=B9Y4Q7_9FIRM Length = 289 Score = 210 bits (535), Expect = 6e-53, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 116/283 (40%), Gaps = 2/283 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L ++ + + + +++ L D +L P++ +++A+ VS ++ + KLG Sbjct: 1 MNLLKKL-ENLENVTPNERILIDAILKDPESFIAAKPKEIASLTYVSVPTIYRLINKLGL 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G LKL L +AL S+ E P I I D + + L T + TL+++ ++ Sbjct: 60 SGVNDLKLQLQDALRSETEVPVESIDFPISPTDTVNEILLHLKDVYTQTIEDTLSLSDQQ 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + +++ A I + + A+NF +++ +I N + + + Sbjct: 120 VLVDVSALMKQAAFIDVYASAGNLFFARNFQFQMQEINVNVNVPEAEYMQKLSAGNADAR 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-NS 239 L + IS+ G +N + ++ IT N L + A + +Y + E Sbjct: 180 HLSIVISFGGRGGSMNTVCQILSDNHSPIVLITSTQKNPLTRFAQYKIYMSSYENHYQKI 239 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 +S S + D L+ + + R + + + + Sbjct: 240 SSFSTRMTLLYILDTLYSIYFRLQYDELLNRKLTTYEKIHRRL 282 >UniRef50_Q9K8R3 BH2940 protein n=4 Tax=Bacillus RepID=Q9K8R3_BACHD Length = 284 Score = 210 bits (535), Expect = 6e-53, Method: Composition-based stats. Identities = 64/277 (23%), Positives = 120/277 (43%), Gaps = 5/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + RI + +++S KK+A+YL+ PDTA L++ +LA A V +++V++FA LGY+ Sbjct: 5 DVYKRIMDLQEKMSKSQKKIANYLIQHPDTAPFLTASKLAKYAAVGEATVIRFAVFLGYE 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L+ L EAL + S V +D E+++ ++ A + ATL E+ Sbjct: 65 GYPDLQRHLQEALQKKMTSAEVFARTT-DREDRPSHAIEEILTDDMANLRATLQQIELEE 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V + A+RI + ++ + Q + L + N V + + + DD Sbjct: 124 FEQAVNSIIEAKRIYVIAYRSAASLGQFLTFYLDLVLQNTELVEQADGVSEHLLDITEDD 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++ + + + + G K + IT + L L E + Sbjct: 184 LVIGFGFARYTKRTVDVLKYVKQRGAKTIVITDHALSPLVPYGDRVLLAATEINSF---- 239 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 I + A + A+ + + E R++ E L Sbjct: 240 IDSFAAPHSIVSAFITAVTRSEHEKVQNRLQQLEELW 276 >UniRef50_C4Z5R8 N-acylmannosamine kinase n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z5R8_EUBE2 Length = 316 Score = 210 bits (535), Expect = 6e-53, Method: Composition-based stats. Identities = 55/282 (19%), Positives = 116/282 (41%), Gaps = 8/282 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L IR R GL++ K++A+Y+L + L++ +L GVS+S+ V+F LG+ Sbjct: 9 DVLSLIRVRMSGLSKGHKRIAEYILANYEKCAFLTAAKLGEVVGVSESTAVRFPAALGFS 68 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P + AL + L + S + + +V ++ + + TL Sbjct: 69 GYPEFQKALEDILQEKIHSFDRI--DVLNSHMTTNMVVNNVMSMDARKIEHTLKSFDTTS 126 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR--DMHALLATVQASSP 179 V + +A + + G + +A+ F + L + N V+ + + L + Sbjct: 127 FDMAVEDIMAAESVYIIGARSCEPLAEFFGYYLRMVKKNVQVVKTGNTNELFEQMMYIGE 186 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+ + IS+ A + +V++IT + + +S L+ ++ + Sbjct: 187 GDVAIGISFPRYSMRTLKAMEFANNRQARVISITDSVHSPMNMYSSCNLFARSDMASI-- 244 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + A L + L +++ ++ E E I A V Sbjct: 245 --VDSLVAPMSLINALIVSICLKNSEQVVENIEKINAFVDNF 284 >UniRef50_A9IGF4 Transcriptional regulator, RpiR family n=10 Tax=Proteobacteria RepID=A9IGF4_BORPD Length = 307 Score = 209 bits (534), Expect = 6e-53, Method: Composition-based stats. Identities = 64/280 (22%), Positives = 123/280 (43%), Gaps = 9/280 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + +IR R L+ +++K+AD +L A + QLA++AGVS +++ +FA+ +G Sbjct: 24 DIVYQIRSRRDALSATERKVADAILDDIAAAAGATVDQLADKAGVSIATISRFARSVGCD 83 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 LKL L++A A + +L + A + A L SE Sbjct: 84 DTRDLKLKLAQASAVGERFLDPSTPEE-------STFYARLYADIEATLRAHLPRFSEAL 136 Query: 122 LHECVTMLRSARRIILTGI-GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + ++R AR + G+ GAS +++Q +L+++G+ AA D L Sbjct: 137 FEQAAGIVREARMTYVFGMGGASAVLSQELQSRLVRLGYAVAAYSDAVLLRMVAATLDER 196 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ +S +G+ E+ + + G +++ +T + L A L E Sbjct: 197 DVVVVLSTSGLTPEILAGTRIVKQYGARIVTLTD-PASPLAGLADVVLPIHTAETDFIYK 255 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 S+ +A + D+L L E ER+R + + + Sbjct: 256 PSSSRYAMLLAIDILATELALARQEATQERLRRIKLALDE 295 >UniRef50_B3EUN5 Transcriptional regulator, RpiR family n=1 Tax=Bordetella bronchiseptica RepID=B3EUN5_BORBR Length = 303 Score = 209 bits (534), Expect = 6e-53, Method: Composition-based stats. Identities = 59/280 (21%), Positives = 114/280 (40%), Gaps = 6/280 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L ++++R L+ + K + +L P A + +QLA +AGVS ++V+ + G+ Sbjct: 7 NLLQQMQERSPELSPAQKMVVRVILDDPQAAVLATVEQLAQKAGVSMPTIVRTCRSFGFV 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 +AL+++ A+ S +H + DD + V K+I +++ Sbjct: 67 SVRDFMVALAQSYAAT----SSLLHRSVLADDGVADVSSKVIHAAISSLSELDRDLDVVI 122 Query: 122 LHECVTMLRSARRIILTGIG-ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + + A RI +G AS +A +L ++G + DMH L + Sbjct: 123 LDKVAERVAQAERIDCYSVGAASTFIAHELHSRLFRLGLRSNTFFDMHQQLMSASTLGAK 182 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 + IS+ G AA G V+A+T L A L + Sbjct: 183 GVAFVISHVGRMPYTLEAARYAREHGATVVALTQ-PGTPLAAAADLVLAVSGPQDPLRRV 241 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A ++ ++L + L Q+ +A ++ + L+++ Sbjct: 242 GTETQLAHLVVIEILMVRLAQKLGPVAVHGLQGFKQLLQQ 281 >UniRef50_C2EDG2 RpiR family transcriptional regulator n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2EDG2_9LACO Length = 274 Score = 209 bits (534), Expect = 6e-53, Method: Composition-based stats. Identities = 61/272 (22%), Positives = 118/272 (43%), Gaps = 9/272 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + +I + L+ D+K+A +L P + +LA EAGVS +S+ +F + LG Sbjct: 1 MTIVDKIYDKQPELSTCDQKIAHVILKNPIEVVDKTISELAEEAGVSLASISRFCKTLGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+ L+ + ++ + E + + + T + S+E Sbjct: 61 AGFHQLKIELAR-------VSEENTTQAVEKENFGGQLSEFVKDKEIE-LEKTFSQISQE 112 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + L AR I + G + A++ +K +IG A + LA + Sbjct: 113 TCEKICGKLLHARAIQVIAEGNTYANAEDAVYKFSQIGLFAFSSASWETALAQTMNLQKE 172 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+LL S +G + L + DE + G V+++T + + Q++ T+A + S Sbjct: 173 DVLLVFSNSGEAKSLLVQIDEAKKRGITVISLTNHENSPIAQKSDLHWRTVARPKVLMSE 232 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIR 272 + A + +FI +++++ + ERI+ Sbjct: 233 YYYSRLALVSAIEAMFILILKKEPKR-LERIK 263 >UniRef50_C9KLC1 Transcriptional regulator, RpiR family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KLC1_9FIRM Length = 279 Score = 209 bits (534), Expect = 7e-53, Method: Composition-based stats. Identities = 51/271 (18%), Positives = 104/271 (38%), Gaps = 3/271 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + ++++ + S++ +A YLL ++++QLA E S +++V+F QKLG+ Sbjct: 1 MNLIKELQEQQD-FSDSERTIATYLLQHSRLLPSMTTRQLARETYTSSAAIVRFCQKLGF 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ ++ + E P + + D + + +K+ + A+ T + + Sbjct: 60 GGYTEFRVEFLAQMMKYLEQP-YGVELSVTNQDSVHSILDKVTRLEIDALQETYQMLDAK 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + +L+ + I + + +A A + + M + + Sbjct: 119 EFVRAFAILQKTQHIDFYAMDNNLDIANMAASSFIMANKCSTVHTAMTMQYLQATGAPKE 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 + IS TG R L A + G L IT + L A + + Sbjct: 179 HVGFFISRTGENRMLIDIAHLLKLRGNPFLLITANQESTLASLADVVFPVASVKSMEELG 238 Query: 241 SISACHAQGMLTDLLFIALIQQ-DLELAPER 270 +TD+LF L+ + D A E+ Sbjct: 239 PRVFLMGAKYVTDVLFAVLMTRVDFRNAQEK 269 >UniRef50_C8N6B7 RpiR family phosphosugar-binding transcriptional regulator n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N6B7_9GAMM Length = 273 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 49/274 (17%), Positives = 105/274 (38%), Gaps = 17/274 (6%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I Q + ++K+ADY L +T + + LA GVS++++ +F+QK G++G L Sbjct: 12 IEAHLQEFSPVERKIADYFLGGGETPPEETGKALAKRLGVSEAALTRFSQKCGFRGLREL 71 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 + + + ++ + T + ++ Sbjct: 72 -----------------FYAHNQTENHGGSDFVQPVLASYQELLNKTYAIIDMRQIRRIT 114 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 +L +R+ + G G+SG+VAQ ++ M+IG A+ D + T + P+ L + I Sbjct: 115 ALLLHKKRVYIYGKGSSGMVAQEMKFRFMRIGLICEAITDDDMIRMTAVLTDPECLAIGI 174 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S +G + + A G + +T + + Q + IS Sbjct: 175 SISGRSKIIIEALQTAKSQGAATVLLTANADREYRDTFDEVQLFAVKNQMEHGRLISPQF 234 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ D+L+ + D + + +++ Sbjct: 235 PVLVVLDILYADYMNHDAAERDRIWQRTYRALQR 268 >UniRef50_C9Q9L7 Helix-turn-helix protein RpiR n=6 Tax=Vibrio RepID=C9Q9L7_9VIBR Length = 281 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 65/261 (24%), Positives = 124/261 (47%), Gaps = 1/261 (0%) Query: 1 MN-GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M+ + +++ Q+++KL+ ++ + LS+ ++ G+S SSV+++A+ LG Sbjct: 1 MDKLINKVKTLVHSSNQNEQKLSQLIVERQFDLSELSATKVGALLGISDSSVIRYAKSLG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 GFP LKL L+ + ++ I D + EK + + ++ + Sbjct: 61 CSGFPDLKLKLAAQAPQVMARTAQSVYASIETGDSTAQIIEKAKHLFVSTIEQSIGLMDA 120 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E + +C L A +I L GIGAS +VA + KL++ GFN +D H + Sbjct: 121 ESVEQCAQQLLKANKIALAGIGASAIVAADINHKLIRAGFNVQFNQDYHIQIVQASLLKA 180 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD+LL +S G +E+ A + + G +V+A+T + + + Q A + + E+ + Sbjct: 181 DDVLLVVSARGNTQEVLTAIERAQQNGAQVIALTRYGRDKVAQLADYVIPYSYTEEHSQL 240 Query: 240 ASISACHAQGMLTDLLFIALI 260 ++ Q D++F LI Sbjct: 241 GMVTPQLLQMAAFDIVFFKLI 261 >UniRef50_UPI000169311A hypothetical protein Plarl_08670 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI000169311A Length = 267 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 67/278 (24%), Positives = 127/278 (45%), Gaps = 22/278 (7%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L I+ +Y ++ +KK+AD+LL P A +++A++ GVS +S+ +F++K+ + Sbjct: 7 SLLKTIQSKYSSFSEKEKKIADFLLSSPAAAAQCHIKEIADQTGVSVASITRFSKKVLCQ 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F LKL L+ D + +L + ++ E Sbjct: 67 SFVELKLKLARE----------------SYDHTKDELDVELKNQYKEMFNDIESLIENEP 110 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L E +++++ A+R+ + G+G+SGL AQ F ++L ++GF + AV D H ++ DD Sbjct: 111 LKEVLSLIKKAKRLFIYGLGSSGLAAQEFNYRLSRMGFYSEAVTDPHLMIIRSVLLEKDD 170 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++A S +G ++L + + K++A T F L + A ++TI S Sbjct: 171 VVIAFSRSGQTKDLLKSLEAAKGKKAKLIAFTAFGDTPLTKMAHKVIWTIHP-VRYQYLS 229 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + L DL+ L+ +R R V Sbjct: 230 TGLDMSVLYLIDLISFHLL-----KNEDRKRIYTETVN 262 >UniRef50_D2PSH8 Transcriptional regulator, RpiR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PSH8_9ACTO Length = 309 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 73/274 (26%), Positives = 122/274 (44%), Gaps = 12/274 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L R+R GL+ + ++A LL +P A L+ +LA G S +V +F + L Sbjct: 5 GFLTRLRAEQPGLSGALGRIAAALLAEPGEAARLTITELAERTGTSPGTVTRFCRTLRLA 64 Query: 62 GFPALKLALSEALASQPESP-SVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+AL+E + S S I I D L V + ++ NT A+ T + Sbjct: 65 GFAELKVALAEEVGRAAPSRWSTDIGRSIEPADELDQVLKVIVGANTQALLDTADQLDLG 124 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + E + AR I L G+G SG+ A +L +IGF ++H+ L +V + Sbjct: 125 AVDEAARAISDARAIHLFGVGTSGITADELRIRLHRIGFACWVWPELHSALVSVALADRR 184 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT--- 237 D+++ IS++G E G + +AIT +AL A L T A Sbjct: 185 DVVIGISHSGQIAETIAVLRAAAARGARTIAITNDATSALAGEAGLVLATAQNGSALTTV 244 Query: 238 --------NSASISACHAQGMLTDLLFIALIQQD 263 + +++ H+Q ++ D+L+ + Q + Sbjct: 245 PPGGAGSSQADALADRHSQFLVLDVLYTRVAQLN 278 >UniRef50_C8NE33 RpiR family phosphosugar-binding transcriptional regulator n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NE33_9LACT Length = 273 Score = 207 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 54/278 (19%), Positives = 107/278 (38%), Gaps = 15/278 (5%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + I Y L +K +A Y L LS+Q+++N VS S+ +FAQK GY Sbjct: 9 KVVPIIESIYDTLTPIEKTIAQYFLEPIPEGVSLSAQEVSNRLFVSIPSLTRFAQKCGYN 68 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + + ++++ + + ++ +E + Sbjct: 69 GYRQFIYDYEKRSKEESTLHINSTKI--------------VLEDYAELLSKSFSLVNEAQ 114 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L +L SA+R+ + G G+SGL A ++ M++G A+ D+H +L D Sbjct: 115 LIRVCELLSSAKRVYIYGQGSSGLAALEMKFRFMRLGMICEAITDLHTMLMNRVLVDEDC 174 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++ I+ + + A + G K + IT L + + + Sbjct: 175 LVIGITVS-ANESVVKAVNIAKNQGAKTVLITSKKSEELSHECDELVLIAMKNALEQGTT 233 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 IS ++ D+L+ + D E ++ ++ Sbjct: 234 ISPQFPVLVVVDILYSYYKEIDKERKHSIFSNTLHAIQ 271 >UniRef50_B0N5H7 Putative uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N5H7_9FIRM Length = 264 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 44/265 (16%), Positives = 116/265 (43%), Gaps = 3/265 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + + + +S+ ++ +++ P+ +++ +LAN+ S +++++ +KLG+ Sbjct: 1 MSLIDNL-SNEKLFTKSEIEVINFIKENPNLVLNMTIGELANQTFSSNTTIIRICKKLGF 59 Query: 61 KGFPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 GF K+ + S + + + ++P + + ++ + + Sbjct: 60 NGFRDFKIEYLRNIESLKYLNNETDFTLPFQENEPTWQIINSISNVYKDSINLINSELNI 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 +L + V +L ++ R + GIG S + A NF KL+KIG + + + + + Sbjct: 120 AELEDIVEVLDTSPRTFVFGIGDSKITAMNFINKLVKIGKFFILTTENNEQESFCKGITK 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD L I+Y + + K++ IT N L + +++ + +E+ Sbjct: 180 DDCCLFITYD-KNESYKACLKILFQKRCKIIVITSNCDNPLVKYSNYHIIIPHKEKDEKI 238 Query: 240 ASISACHAQGMLTDLLFIALIQQDL 264 A+ + A + +++ + +++ Sbjct: 239 ATFYSQLAFNYILSIIYSLIYKRNK 263 >UniRef50_C6JLG4 Predicted protein n=2 Tax=Fusobacterium RepID=C6JLG4_FUSVA Length = 299 Score = 206 bits (526), Expect = 6e-52, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 122/278 (43%), Gaps = 7/278 (2%) Query: 1 MNGLLRI-RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M G+ ++ R+ Y L +++K++A+Y+ ++S +L E VS ++V++F++K+G Sbjct: 12 MTGIAKLYRKNYNNLTKAEKQIAEYICENSKKVIMMTSLELGKELNVSDATVLRFSKKIG 71 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 + + LK L+E L ++ + N + V +K+I + M Sbjct: 72 FSKYNELKEYLAEELEARKSVIDKMLDNWNNDREDNNSV-KKMINADIKNMQKLYMDLDL 130 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASS 178 E++ V +++++++I + G+G+S VA+ W M +G A + + + L + + Sbjct: 131 EEIDNAVKLMQTSKKIFVIGVGSSRAVAEMLGWHCMVLGLEAVTISEGGYGLFEKIAHVT 190 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 DD ++ S ++ + + + IT + + AS + + Sbjct: 191 KDDCVIFFSVPKYLKDEVQMMELLHAKKVPSVVITNNLFSKIASYASIFIPVETNNTSF- 249 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 ++ + +++ + L + D + + +E Sbjct: 250 ---FNSFILHAEVCNVILLKLFEGDRNRYFQYFKQNEK 284 >UniRef50_Q1GCY7 Transcriptional regulator, RpiR family n=2 Tax=Rhodobacteraceae RepID=Q1GCY7_SILST Length = 300 Score = 206 bits (526), Expect = 6e-52, Method: Composition-based stats. Identities = 62/279 (22%), Positives = 121/279 (43%), Gaps = 5/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + +R+ A ++K+AD++ + +++ +LA GVS +VV+F + +G Sbjct: 13 DLISNLRELNGSFAAREQKVADFVSAHLEEISNMTIAELAGAVGVSTPTVVRFCRSMGCD 72 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF KL L++ LA + + G ++++ A + E+ Sbjct: 73 GFREFKLRLAQNLAVSLQYLAPSQREVPEGGAGA---VDQVLGALYATVNVMRQQLVPER 129 Query: 122 LHECVTMLRSARRIILTGI-GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L L +A +I++ G+ G S +VAQ A ++ ++G A ++ D + L Sbjct: 130 LDAAAAALAAAGQIVVAGVGGGSTMVAQEAANRMFRLGIPAVSISDSYLLQMRAATLVKG 189 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+LL +S +G E+ AA G V+AI + L Q A+ + E Sbjct: 190 DVLLLVSASGAADEIVSAAAIAGGYGATVVAI-ARPGSRLAQEATVAIEADLPEDPDILK 248 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ +A ++ D L +++ Q E +R A + Sbjct: 249 PTASRYAHLVIVDALAMSVAQARTAATTENLRRIRASLT 287 >UniRef50_D1C9F1 Transcriptional regulator, RpiR family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C9F1_SPHTD Length = 290 Score = 206 bits (526), Expect = 6e-52, Method: Composition-based stats. Identities = 52/276 (18%), Positives = 106/276 (38%), Gaps = 6/276 (2%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 RI +RY L+ +++A ++ S+ +L V ++VV+ AQ LG+ G+ Sbjct: 9 RIAERYDQLSPKQRQVARFIADNEAFTAFASAAELGKAVDVDAATVVRLAQSLGFSGYAE 68 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 L+ + + + + + D + + ++ + + TLN E + Sbjct: 69 LQGVIRGRIPERLTFVQRIEQQRQQPMDR-QQLPVQVFTNDIENLNQTLNQTQPEAIEAA 127 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQASSPDDLLL 184 V + A +I+ G+G S VA L +G + + L T+ P DL++ Sbjct: 128 VEAICRADHVIVVGMGFSAAVAVFLGHGLNSLGIRTTVLTEGGSTLTITLANLRPTDLMI 187 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 +S R+ A G +A+T + + + A H L + Sbjct: 188 GVSVWRYLRDTVAALAGAAERGVPTMALTDSSVSPPARIADHVLVAATR----GVGHSLS 243 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + +LL + ++ E A +R + L ++ Sbjct: 244 PVGLIAVVNLLLAEIAVREPERALAVLREVDRLYRE 279 >UniRef50_B9B6B2 Transcriptional regulator, RpiR family n=3 Tax=Burkholderia multivorans RepID=B9B6B2_9BURK Length = 311 Score = 206 bits (526), Expect = 6e-52, Method: Composition-based stats. Identities = 64/265 (24%), Positives = 111/265 (41%), Gaps = 3/265 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 + I+ R LA S+ K+ + LL P ++ Q+A AGVS +V++ A+ LG+ GF Sbjct: 37 IGSIQARSGDLAASEAKVVELLLSDPLFVGASTTAQVAARAGVSPPTVIRAARALGFTGF 96 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 LK+ ++ A + + + D V E I+ A+ A L Sbjct: 97 TELKIEIARARGTARFFAPPEV---LTADASSAAVLETSIRTGVDALSALSGAIEIAALD 153 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 + V ++ AR++ G G S VA + ++L +G + D + + + P D++ Sbjct: 154 KAVASIQQARQVFAFGAGPSATVAADAVFRLRAVGVTTVGIPDYLSAMIAARLLGPGDVV 213 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 +A+S TG AD G ++A+T L A L A+ Sbjct: 214 IAVSSTGRTSSTLAVADAASSAGATLVAVTNQYGTPLANLADIALVVGGAPLPAQMAAAG 273 Query: 244 ACHAQGMLTDLLFIALIQQDLELAP 268 + AQ ++ D L AL +D + Sbjct: 274 SRLAQLVVIDALVAALALRDPARSR 298 >UniRef50_A5KIQ4 Putative uncharacterized protein n=2 Tax=Ruminococcus RepID=A5KIQ4_9FIRM Length = 288 Score = 206 bits (526), Expect = 6e-52, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 110/282 (39%), Gaps = 3/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + I+++ + + ++ + Y+L P+ +SS++L + S +SV +F QK+G Sbjct: 1 MSIIQIIKEQM-NMTERERDICRYILENPEKIEEMSSRELGHATFTSAASVTRFCQKIGV 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGFP K+ L + + + + + + K K A+ T S Sbjct: 60 KGFPEFKMQFVRELRTGGMEDVSAV--TMSERENVVTMVRKAEKIQRQAVEETNKELSYT 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L ++ A + + +A+ G ++ +++ + Sbjct: 118 QLVRIGKLIADASCVDFYVYDMNIYLAKYGCALFFHAGKLSSVHSEINIQGLHAAMPADG 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 + + IS+TG +L + R G K++ I+G + Q A+ LY E+ Sbjct: 178 HVAIIISHTGKNEQLAEIEKMLHRGGTKIIVISGNRKGVVGQYATEFLYAAGSEKVEEFW 237 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 S + + L D+L+ + E E K L+ Sbjct: 238 SSTFFASGKYLLDILYGMEFSRRYEENIALNSRYEKSGKNLL 279 >UniRef50_A6W619 Transcriptional regulator, RpiR family n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W619_KINRD Length = 296 Score = 206 bits (525), Expect = 7e-52, Method: Composition-based stats. Identities = 70/268 (26%), Positives = 120/268 (44%), Gaps = 2/268 (0%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 S ++ LL P A L+ LA S+++VV+ A+ LG+ G+P +L L+ Sbjct: 18 PSATASGARVLQALLADPAGAAQLTVTDLARRTSTSEATVVRTARSLGFAGYP--QLRLA 75 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 A A P+ + + L V L T A+ AT L + + Sbjct: 76 LAAAGAHHEPAALLTGSLEDTADLATVVATLAAVETEAVAATARTLDVAALAAAADAVHA 135 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGV 191 AR + GIGASGL+A +F K ++G + HA L + P D LA+S++G Sbjct: 136 ARVVDCYGIGASGLLAADFDHKAARVGLVTRLRTEGHAALVSSALLGPGDAALAVSHSGR 195 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGML 251 +L +A + G V+A+T + L A H L E A + ++++ + ++ Sbjct: 196 TPDLVGSARQARERGAAVIAVTSSPGSPLAAAADHVLVATGRETAYRAGAMASRASSLLV 255 Query: 252 TDLLFIALIQQDLELAPERIRHSEALVK 279 D L++A++Q+ A +R + V+ Sbjct: 256 LDCLYVAVVQRLGPAATAALRGTYRAVE 283 >UniRef50_A0YBK7 Transcriptional regulator n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YBK7_9GAMM Length = 271 Score = 206 bits (525), Expect = 7e-52, Method: Composition-based stats. Identities = 62/271 (22%), Positives = 115/271 (42%), Gaps = 6/271 (2%) Query: 10 RYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLA 69 L++++ +A +L PD A + ++ LA A VS + +F + LG FP K+ Sbjct: 1 MLPSLSKAESSIARAILADPDAAVNSTTADLARIAAVSDPMISRFCRTLGCSSFPDFKVR 60 Query: 70 LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTML 129 L+++L S+ I + D L EK I N AA+ + + + V L Sbjct: 61 LAKSLVSKASF----ISEAVSKGDDAALYIEKRINANQAALEYIRSKLKPAIIEQTVAAL 116 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYT 189 ++RI + G+G + +A++ KL ++G A D A+ + ++L IS+T Sbjct: 117 GRSKRIEIFGMGGAAAIAKDAQHKLFRLGIPTVAYEDHLMQRMAAAAADENTVVLVISFT 176 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE-EQATNSASISACHAQ 248 G R + AD ++AIT + L + A + + E E T ++ Sbjct: 177 GRTRAMIEIADIAKNSQATLIAITN-PKSPLAKLADITITSGDEIEDTTIYVPMTTRIII 235 Query: 249 GMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + D+L L E+++ + + Sbjct: 236 LTIIDILATGLALTQGPAIDEKLKTIKHSLD 266 >UniRef50_D1BBP1 Transcriptional regulator n=2 Tax=Micrococcineae RepID=D1BBP1_SANKS Length = 290 Score = 206 bits (525), Expect = 8e-52, Method: Composition-based stats. Identities = 60/275 (21%), Positives = 117/275 (42%), Gaps = 9/275 (3%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 RI L +++++ D +L A ++Q++A+ AGV++SSV++ Q+LGY+G+P Sbjct: 19 RIATVRNTLQPTERRVVDLVLDDVAGAVEATAQEIADRAGVARSSVIRTCQRLGYRGYPQ 78 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 L++AL+ LAS E + P D ++ A + +V ++++ Sbjct: 79 LRVALARELASGAEPSTHP--------DTAVGRVRTHVESLAATLPQITSVLDDDQVERA 130 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 VT+ A R+++TG G S +A + A +L +G V D + DL L Sbjct: 131 VTLCVGAGRVLVTGNGLSSPLAADLALRLTAVGRPTECVADPIGQQIAAAQLTSADLCLV 190 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA-SISA 244 +S +G A G V+ +T F + L A L + + ++ Sbjct: 191 VSGSGASESSLRVARAGRAAGVTVVVLTSFVESPLTALADVALVVGPAAGSFRAELEHTS 250 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ + L + + E + + ++ Sbjct: 251 RVPHAIVLEALVEVVADRLGERSRQVRSRVLDVLS 285 >UniRef50_UPI0001C36367 transcriptional regulator, RpiR family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36367 Length = 299 Score = 205 bits (524), Expect = 9e-52, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 114/268 (42%), Gaps = 3/268 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +++ R +G ++ +A Y+L + + +S+++LA + S+++VV+ +KL G Sbjct: 2 ILEKLK-RMEGFTHQEQAVARYILEHVEEIQQMSTEELARVSYTSKATVVRLCKKLDTAG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + LKL L L + I L+ + L K A+ T + + Sbjct: 61 YQELKLKLVSELVQNIRVNQLLNREPITETSTLQDILHTLPKLYDKAITDTELCMDKNVI 120 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 +R++ RI + G G S ++AQ+ A+K +G AA ++A + + + Sbjct: 121 KRICNRIRTSDRIDIYGNGISYILAQSAAFKFATLGMECAAYDSVNAHFLSAGK-TKKTV 179 Query: 183 LLAISYTGVRRELNLAADEMLR-VGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 I++TG + + A + V+ I G +++ + + + + Sbjct: 180 SFVITFTGANKSMIDTARYLKETTETYVVGIVGRHNEEIRKWCHEIVEIPSRDSLLSLKV 239 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPE 269 I++ A + D+ F L+ Q E + Sbjct: 240 ITSFTATTYVLDIFFSMLLAQTYESHVK 267 >UniRef50_A0ZNS9 Putative uncharacterized protein n=3 Tax=Photobacterium RepID=A0ZNS9_PHOPO Length = 277 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 96/270 (35%), Positives = 142/270 (52%), Gaps = 8/270 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + +I L+ S +K+A +L QP LSS QLA +A V QSS+VKF QKLG+ Sbjct: 1 MTIIAKIANIKSQLSPSAQKIAALILQQPAAVVSLSSLQLAQQANVGQSSIVKFTQKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVP--IHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 GFPA K A+ E LA Q + P + NQI D L + +KL + T A+ T N Sbjct: 61 TGFPAFKNAIKEELARQQAIGNDPQQLQNQISHSDTLITIAQKLAHQKTDAIIETTNAID 120 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 E+ L + + +A+RI L G G S ++A++F+ KL+ +G A A +D + + + Sbjct: 121 EQNLKNIIALFINAQRIQLVGFGHSAIIAKDFSTKLLTLGMMAIAEQDSRSQIDIAKTLG 180 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT- 237 P D+ I Y G ++ L A G ++A+T L+Q A L T+A E + Sbjct: 181 PTDIQCHICYDGNHQDALLTAHSAKMKGATLIALTSPHSTPLRQLAQFSLDTLAIETSNH 240 Query: 238 -----NSASISACHAQGMLTDLLFIALIQQ 262 ++ SI++ AQ LTDLLF+AL Q Sbjct: 241 RQYQPHNYSIASHAAQQTLTDLLFMALTHQ 270 >UniRef50_UPI0000D541FA probable transcriptional regulator n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D541FA Length = 207 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 46/211 (21%), Positives = 104/211 (49%), Gaps = 6/211 (2%) Query: 1 MN--GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 M+ L +I+ L +S++K+ +++L P + + + + ++ G+S+ ++++F + + Sbjct: 1 MSTKLLRQIKNSLSDLRKSEQKVGEFILNDPKSVITMKTAEASSAMGISEPTLIRFCKAI 60 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 G+ GF LK+ LS+ LA+ + +I DD + + EK+ + + + + Sbjct: 61 GFTGFQDLKINLSQQLAAD----DYFVMYEINEDDSIHELCEKVFDTSISEILNVRSQID 116 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 ++ L + L +A+R+ G S VA + K ++ ++ + D H + + Sbjct: 117 QDILENAIETLVNAKRVEFYAFGGSAPVAMDGQHKFFRLKIPSSYISDPHLQFMSANSLE 176 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKV 209 DD+++AIS +G L + + + G KV Sbjct: 177 RDDVVVAISQSGTTTALIESVKIVRKNGAKV 207 >UniRef50_B1KTP2 Transcriptional regulator, RpiR family n=10 Tax=Clostridium RepID=B1KTP2_CLOBM Length = 255 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 99/256 (38%), Gaps = 12/256 (4%) Query: 8 RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALK 67 + + L +++K L +Y+ +S + A VS ++V++ +KLG+ GF LK Sbjct: 7 EKILKELTKNEKDLLNYINSNNSKIYKMSINEFAQSTYVSTATVLRLCKKLGFNGFNELK 66 Query: 68 LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 L ++L + + I L+ + T+ + E+L V Sbjct: 67 FNLKKSLTLKNKGYDSSIG------------LNGLLSRRLLELKETMISLNLEQLDSIVD 114 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAIS 187 L S + I + G G + + + L+ + D + T +D+ + S Sbjct: 115 YLCSDKNIHIFGRGLTQMSLEYLYNILISLNRQCMFYLDPPLVYQTASQMDENDVFIIGS 174 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHA 247 + G + A + G V+AIT + L ++A L + + + I++ + Sbjct: 175 FGGSTDPIVKAVEISKENPGTVIAITSNPNSELAKKADIVLIGETQNRFFSGIDINSRLS 234 Query: 248 QGMLTDLLFIALIQQD 263 + +++ + + Sbjct: 235 IQFIVEIIVELYMSRM 250 >UniRef50_C0C1I3 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C1I3_9CLOT Length = 288 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 64/275 (23%), Positives = 124/275 (45%), Gaps = 2/275 (0%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSS-QQLANEAGVSQSSVVKFAQKLGYKGFPA 65 I Y L +++K ADY+LL P A S + A AG S+++ V+ AQKLGY G+ Sbjct: 12 ITAIYDTLRGAERKAADYVLLHPQEAALHSIITESAGRAGCSEATFVRLAQKLGYNGYAQ 71 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 LK L A A+ E ++ + I + + V + A+ TL++ + E Sbjct: 72 LKQMLLPAEAAF-EPETLLPYGDIGRGEDSQAVLCSVFHAAARALDDTLDLLDRKVYEES 130 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 ++ + A +I+ G G + A + K +IG A D + D+LL Sbjct: 131 LSYITRAGKILSAGAGDAYTAAYSAYLKFSRIGLRAVCPADFDVQIMEASGMKRGDVLLL 190 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 IS++G R L A+ +++ +T + + L + + + T A + + +++ Sbjct: 191 ISHSGSTRTLCQVAETAKAKKARIITVTNYPLSPLAKLSDCVIRTAAFTKNPCNETVAKR 250 Query: 246 HAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + + L+I+++Q E + + + ++K Sbjct: 251 IPELCIIEALYISILQGREEKYAKMLAAANEELRK 285 >UniRef50_B2UF98 Transcriptional regulator, RpiR family n=2 Tax=Ralstonia pickettii RepID=B2UF98_RALPJ Length = 287 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 68/279 (24%), Positives = 117/279 (41%), Gaps = 6/279 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +R + L+ + + +A +L P+ + S + LA AGVS ++V+ Q LG++G Sbjct: 8 LLNALRAQLPALSPAQQGVARLILDAPELSLEQSVETLAVRAGVSMPTIVRMCQALGFEG 67 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 K L+ LA + + + DP LV K+I T A+ S ++ Sbjct: 68 LREFKATLAAELAHAQPT----LPGHVGRADPPALVASKVIDGATRALAKLRESLSTTQV 123 Query: 123 HECVTMLRSARRIILTGIG-ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + ARR+ G AS +A + +LM++G + A D H L + D Sbjct: 124 DAAAERIARARRVDCYAAGAASSFMANDMQARLMRLGLASNAYFDAHLQLVSAAMLGASD 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++A S+ G L + G V+AIT L +RA L E A Sbjct: 184 VVVAFSHVGRMPYLLESIAYAAEQGACVIAITQAG-TPLAERAQIALTVDVPEDAVMRVG 242 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A + ++L + Q+ E+ R+R + L+ + Sbjct: 243 TEAYLVHLTVIEILMTCVAQRRDEMVRSRMRAIQRLLTE 281 >UniRef50_B9DUA5 Putative transcriptional regulator n=1 Tax=Streptococcus uberis 0140J RepID=B9DUA5_STRU0 Length = 290 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 109/278 (39%), Gaps = 4/278 (1%) Query: 6 RIRQRYQG--LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 I++ + + ++ ++L + + LS Q +A + S++V+ A+KLG+KG+ Sbjct: 2 LIKEELETYPFSPAEAVTVAFILREVEVLESLSIQAIAKKTYTQPSTLVRIAKKLGFKGW 61 Query: 64 PALKLA-LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 K A L+E V + D + +K+ A + +++ ++L Sbjct: 62 VDFKKAYLAEHDYLTRSFTKVDSNIPFSALDNPMSIAKKIGILEKATIDDLISLLHYDQL 121 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + +L A I + A+ ++A++FA K+ +IG + P+ + Sbjct: 122 SKAKKLLSQAEMIYIFAQSANIILAEDFALKMRRIGKTVHIATTLGEERYVAHNMMPNAI 181 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-NSAS 241 + IS +G + + + K + IT N L Q L E+ + Sbjct: 182 AIFISTSGETQPILDIVSIAKKAKIKTIGITSIGNNQLSQEVDLFLPMTTREKLFSKIGN 241 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + + +L D+L+ + E ++ S + Sbjct: 242 FTTNISVHVLLDILYSLTFSSQYDFHLEHLKESGQKID 279 >UniRef50_Q8RAK1 Transcriptional regulator n=1 Tax=Thermoanaerobacter tengcongensis RepID=Q8RAK1_THETN Length = 263 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 113/261 (43%), Gaps = 8/261 (3%) Query: 21 LADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPES 80 +A Y++ + A ++S+ +A E +S+S+VV+FA +LGY GFP LK AL E + + + Sbjct: 2 IAQYIVNNYEKAVFMTSKDIAKELKISESTVVRFASELGYNGFPELKTALQEFVKGKLTT 61 Query: 81 PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGI 140 +I + + +++ + ++ TLN + V + +AR+I + G+ Sbjct: 62 LQRL---EITKESNEEKLLAEVLNLDIGSIKQTLNEVDVGTFKKVVDCILNARKIYIVGL 118 Query: 141 GASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSPDDLLLAISYTGVRRELNLAA 199 S ++A+ + L + N V+ + L + +DL++ I + R Sbjct: 119 RTSTVIAEYMGFYLNLLRDNVIVVKRGVSDLFEQILRVEREDLVIGIGFPRYSRRTVDLL 178 Query: 200 DEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIAL 259 G V+A+T + L + A L + + + A L + + +A+ Sbjct: 179 KYAKSQGATVIALTDSFISPLARIADEVLTAKNSIISF----VDSLVAPLSLVNAIVVAV 234 Query: 260 IQQDLELAPERIRHSEALVKK 280 ++ E E + ++ Sbjct: 235 GTRERETITGVFEKLENIWEE 255 >UniRef50_A8F424 Transcriptional regulator, RpiR family n=1 Tax=Thermotoga lettingae TMO RepID=A8F424_THELT Length = 282 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 115/279 (41%), Gaps = 9/279 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + +++ +++S ++A +++ P +++ +LA S S+VV+F++KLG+ Sbjct: 4 SVFQKMKDMMPSMSRSQIRIAQFIIENPSKVLNMNILELARSCESSPSTVVEFSKKLGFS 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + ++AL++ +A D LR + + + + ++ + S+E Sbjct: 64 GYKSFQIALAQEIALFETLKPDS--------DRLRRICRDFLGFVFSELKQSVELISDEV 115 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L ++ + + + G + ++ KL + GF + + Sbjct: 116 LTRASDIILKSNVVEIFAYGFDSIAGKDLFLKLKEFGFQVNFFSNPFLQSISASHLGNRG 175 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +AIS + +L A + G V+AI + + + L + + Sbjct: 176 CAVAISSSHSSTDLLDAISFSKKSGASVIAI-ASPSSKIAEVCDILLPAYVRTEILSEGG 234 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + Q ++ DLL + + + D + E+ +H E ++ + Sbjct: 235 FLTKYLQIVIVDLLILKMFEIDKDRLYEKYKHFETILSQ 273 >UniRef50_C3WA33 Transcriptional regulator n=3 Tax=Fusobacterium RepID=C3WA33_FUSMR Length = 283 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 58/281 (20%), Positives = 110/281 (39%), Gaps = 8/281 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L + Y ++S KK+A+Y+ +S +LA E S +++ +F++ LG+K Sbjct: 4 KILRYLDDNYNSFSKSFKKIAEYIKYNQSIISFISINELAKETETSPATITRFSKNLGFK 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P + + + Q S + N I D V +++I N + E+ Sbjct: 64 GYPDFQKIFQKEV-EQQTSYMKGLKNSITERDDSSSVLQEMINTNIELLQEMDVFEIEKS 122 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAA-VRDMHALLATVQASSPD 180 L + V + S+R++ + G S +A + L + + + + PD Sbjct: 123 LDQAVDWINSSRKLYILGARGSYALAYYLYFMLKEFREGVELMISGASDFTDKLLYTQPD 182 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DLLL IS+ + G KV+ IT + L + L T E+A Sbjct: 183 DLLLTISFHPYTNFTYQVTEFFKEHGNKVITITDKKDSTLGNISDLVLTTKNGEKAY--- 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++ + L + L D E E++ + + + Sbjct: 240 ---TFVPGTVIINALLVKLGMVDKENTVEKLDKLKEITDRF 277 >UniRef50_UPI0001C42AD8 transcriptional regulator n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42AD8 Length = 281 Score = 203 bits (518), Expect = 5e-51, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 108/281 (38%), Gaps = 7/281 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L I++ L + + +ADY+L L+ LA S +++++ LGY Sbjct: 3 NPLTVIKEHLSKLTNAQRIIADYILKNSSEVAFLTIHDLAQRVNTSSTTIMRLMSNLGYS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + L + L +P + + + + I + + + + + Sbjct: 63 GYSEFQKGLQK-LIRDQTAPQTRLEINLE-NVNKDDLWGNTINHHLYQIQKVMEQMPKSQ 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAA-AVRDMHALLATVQASSPD 180 L E V + S+R++I T + + + Q L + N + D + + + Sbjct: 121 LDEVVKKITSSRQVICTSVRSGLPIGQYLTHGLNRTLGNCRLVIADTSDWVDEIITMKSE 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++A S+ + + G +++AIT + + + A L ++ A ++ Sbjct: 181 DLIIATSFPRYAKRIIDFVKAAKCHGVQIVAITDSYSSPIVEYADIVLPCDSDSLAFHN- 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + ++ D L A E +R+ ++K + Sbjct: 240 ---SPIVAMIVADYLINATAIGQSEETRKRLDKINEMLKDM 277 >UniRef50_C7CRC1 Predicted protein n=24 Tax=Enterococcus RepID=C7CRC1_ENTFA Length = 270 Score = 203 bits (518), Expect = 6e-51, Method: Composition-based stats. Identities = 50/265 (18%), Positives = 109/265 (41%), Gaps = 13/265 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + ++ L++ + ++ DY+L + ++A VS +++ + A+ LGY+ Sbjct: 19 GLIALLEKKRNHLSKIENQVLDYILTHMTEISSQTIYEVAQALFVSTATISRTAKHLGYR 78 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK A+ +++ S+ + + ++ A + + E K Sbjct: 79 GFQELKYAIVQSVQSESTESDSRS-------------FQAITQQLIANVQDSFQQMDEAK 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + E + M+ A I + G+G S + +FA KL +G A A D A V+ D Sbjct: 126 VAEMLKMIERANTIEVFGVGGSFPICTDFARKLTFLGKKAYARSDWDEQAAAVKNLDGQD 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L + +SYTG + + A ++++ + L++ ++ L+ + Sbjct: 186 LAIFVSYTGETKGILAYARVAQEQQVPMISLISTKGSTLEKLSTTTLFAKGTTRYHQRVD 245 Query: 242 ISACHAQGMLTDLLFIALIQQDLEL 266 +S+ A L D + + + Sbjct: 246 LSSRIAVICLFDTVLLMYAEAKQPR 270 >UniRef50_Q89XK4 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89XK4_BRAJA Length = 318 Score = 203 bits (517), Expect = 6e-51, Method: Composition-based stats. Identities = 57/246 (23%), Positives = 106/246 (43%), Gaps = 4/246 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + IRQ L+ S++++A LL + A H S+ +LA A VS+ +V +F++ +G + Sbjct: 30 DIISVIRQSAPSLSPSEQRVAMALLADVEFAIHASNAELARSARVSEPTVTRFSRSVGCR 89 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G LK+ L++A+A +P H + D + + +E A+ A +E Sbjct: 90 GVRDLKVRLAQAMAVGRIYVELPPH--VGTDLARPALWRSVFQEIRRAIAAAEEGLRKED 147 Query: 122 LHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + ++ G+G S L A + ++G + D + + Sbjct: 148 IERAAEAISRCSKLAAFGVGGGSTLAAMEVQNRFFRLGIAVSHTSDPSLMRMIAATLGEE 207 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++AIS TG E+ AA + G V+AIT + L A L E Sbjct: 208 DVVVAISTTGAASEVIEAAGIAKQYGALVVAITR-PQSRLASIADIALGVHVPEAPDALK 266 Query: 241 SISACH 246 ++ + Sbjct: 267 PTASRY 272 >UniRef50_B1QUP4 Phosphosugar-binding transcriptional regulator, RpiR family n=2 Tax=Clostridium butyricum RepID=B1QUP4_CLOBU Length = 286 Score = 202 bits (516), Expect = 7e-51, Method: Composition-based stats. Identities = 54/281 (19%), Positives = 118/281 (41%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN +I + L +++K L +++ + L + + N+ VS+S++ + +KL Sbjct: 1 MNIFFKIDELVD-LTENEKILVEFIKSKRFEFAELEVEDICNQCFVSKSTIYRLCKKLNL 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G LK+A+S + + V I+ + V + L + + +T N+ + Sbjct: 60 IGLSQLKVAVSAGVKDYVQE-QVDYDFPIKSNQTQTEVLDSLKTIYRSTINSTYNLMDLQ 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L+ L+ A I + + A+NF +++ +IG N + + T S Sbjct: 119 ELNYIALQLKKANVIDIYTSAGNIFFAENFKFQMAEIGVNINVPEEEYIQHLTASTSDKS 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN-S 239 + + IS+ G R + + ++ +T N L++ A H LY + E N Sbjct: 179 HVAIVISFGGRGRCTSSIIGLLKEKKTPIILVTSTDDNPLKKYAKHILYMSSFENHFNKI 238 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +S S + + D+++ + D + + + ++K Sbjct: 239 SSFSTRLSLLYILDVIYGCYFKLDYDKNIKYKTDTYKRMRK 279 >UniRef50_C8STB5 Transcriptional regulator, RpiR family n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8STB5_9RHIZ Length = 275 Score = 202 bits (516), Expect = 9e-51, Method: Composition-based stats. Identities = 57/277 (20%), Positives = 117/277 (42%), Gaps = 10/277 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + +R + + ++A+ +L QPD S +LA + S++SV++F + G+ G Sbjct: 5 LIASLRAAAGDMTPALARVAETVLAQPDATLRQSITELAEASASSEASVMRFCRDQGFAG 64 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F KLAL++ LA+ + + + ++L++ ++ T + E + Sbjct: 65 FQDFKLALAKELATDERARDIGLPTDD---------IQRLVETAIISLRETEQLIVREDI 115 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + L +A I GI AS + AQ A+K+ +IG + A+ D H + + + Sbjct: 116 AKAARQLLAATAIDCFGIAASAITAQYLAYKMTRIGKLSRALGDAHLAVMAAGTTQKGTV 175 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + IS +G + A+ G V+ I+ + + L L E + Sbjct: 176 QVVISSSGSTIDAVRIAELARSQGAFVIGISNRSKSPLVAACDLALIASWPETPLTGGAF 235 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + +Q ++ D L +++QD + + +V Sbjct: 236 PSKISQLLIVDALAAEMMRQDPAR-LALLGRTAEVVS 271 >UniRef50_A1WRM9 Transcriptional regulator, RpiR family n=2 Tax=Comamonadaceae RepID=A1WRM9_VEREI Length = 324 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 52/261 (19%), Positives = 95/261 (36%), Gaps = 8/261 (3%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 RI Q L +S +++AD++L P L +LA AGVS ++ +FA+ L + G+ Sbjct: 14 QRIAQALPRLTRSHRQVADFVLAHPLQVATLPIDELAAAAGVSVATANRFARALDFDGYA 73 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 + L +P + + + V + E+ + AT Sbjct: 74 TFRAELVRGF-ESLVAPIERLRGNLEHPTTVAEVFATALDESRRNIEATRQSLDYAACEA 132 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS---SPDD 181 V + AR I + G GAS +A L + + + + + + P D Sbjct: 133 AVQRILKARSIYIGGFGASAWLAGLLQHGLDGSCNDVRMLSSVSGVTHSARTLMHAGPQD 192 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L + +++ + A G VLA+T + A LY E + Sbjct: 193 LFIGLTFPRYLTDTVALAQIARSQGCAVLALTDRPNAPIAPLADVVLYCQT-ETSYRPNC 251 Query: 242 ISACHAQGMLTDLLFIALIQQ 262 ++ L + L A+ + Sbjct: 252 ETS---VLALIEALTSAVALR 269 >UniRef50_C5CD76 Transcriptional regulator, RpiR family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CD76_KOSOT Length = 278 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 68/278 (24%), Positives = 122/278 (43%), Gaps = 10/278 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L + +R L S++K+A Y+ P ++S Q LANE V S+V+K A+KLG+ Sbjct: 4 SFLNQFNERVGALTSSEEKVARYIKENPLKVVNMSIQSLANECFVVPSTVIKTAKKLGFS 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+AL+ L + D L ++ + + SEE Sbjct: 64 GFSELKIALAAELDKAAITGLDS--------DILSNTFKRYAEFVQELIEQASVRLSEEL 115 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L+E ++ A +I + G + + KL++IG A + + + + +D Sbjct: 116 LNEAARIVLEANKIDIYSFGFDSIAGLDLYLKLVQIGKTTAHYENGYMQMISATYLGTED 175 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++AIS TG ++L A + G KV+ I + + L + L T Sbjct: 176 AVIAISSTGSSKDLFDAVKRAIESGAKVIVI-APSSSMLAGLETVYLDTYFSTLVLPEGG 234 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 I+ Q L D L++ +++ D E + ER + +++ Sbjct: 235 IATRLVQLFLIDQLYLRILKMD-EKSSERYEKFQNVLE 271 >UniRef50_UPI0001B56E76 RpiR family transcriptional regulator n=1 Tax=Streptomyces sp. SPB78 RepID=UPI0001B56E76 Length = 294 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 109/279 (39%), Gaps = 2/279 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + IR GL+ ++ ++A +L + LS ++A A + SSVV+ Q+L ++ Sbjct: 11 DLAAHIRSHLSGLSGAEARVARTVLDLGERLVGLSVSEVAALAETAPSSVVRTCQRLEFR 70 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKE--NTAAMYATLNVNSE 119 GF LK+A + P GD + A+ Sbjct: 71 GFQELKIAAARQAPRPAREPGAAGGPADSGDAADPAARALAATLAASREALDGLRTTLPP 130 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 +L E +L A R+++ G G S V + A++L +G A D + + Sbjct: 131 ARLGEAARLLHGASRVLVVGAGLSQPVVADAAYRLRAVGRAVDAPTDPLTAQLSAGLLTD 190 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 + LA+S+TG R AA G VLA+T + + L + + L ++ Sbjct: 191 SSVCLAVSHTGATRSTVDAARRARLQGAAVLALTSYVRSPLTETSDCVLVAGGQDLVLGL 250 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++++ A + D L L+ + A + S + Sbjct: 251 EAVASRLAHLAVIDALVQTLLDLGGDEARRALDVSAEVT 289 >UniRef50_B9DT48 RpiR family regulatory protein n=1 Tax=Streptococcus uberis 0140J RepID=B9DT48_STRU0 Length = 265 Score = 200 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 53/266 (19%), Positives = 107/266 (40%), Gaps = 2/266 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L R ++ + +++ + DYL + L+ QLA S +S+++ QK GY Sbjct: 1 MTILSRFAEK-ENFTPTEQLIIDYLQSHQEELESLTIGQLAKGTFSSNASIIRLCQKCGY 59 Query: 61 KGFPALKLALSEAL-ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 +GF +LAL L +S+ V + + + + L +++ ++ Sbjct: 60 QGFRDFRLALVSELTSSRYLGKIVDFSRPFQIKESSQEMVNSLFSLYKSSIDQVQSLLDI 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 +L E + + R+ L G G L ++F+ KL+KI + + V + Sbjct: 120 PQLEEMAEQIAQSNRLFLFGYGDVKLTLKSFSNKLVKINYFPIMATENEEEHEIVPHITN 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+ L +SY G ++ + R G IT + L + L E+ Sbjct: 180 GDVALFVSYRGKNEKMAQHIVSLRRQGVATFVITANQKSPLLPYSKGYLLIPDLEKEDKI 239 Query: 240 ASISACHAQGMLTDLLFIALIQQDLE 265 + + + L +L++ L ++ + Sbjct: 240 GTFYSQLSFDYLLNLIYTFLYKKHYD 265 >UniRef50_B2TKZ2 RpiR-family transcriptional regulator n=49 Tax=Bacteria RepID=B2TKZ2_CLOBB Length = 301 Score = 200 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 59/279 (21%), Positives = 121/279 (43%), Gaps = 7/279 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I+ ++ L++ K +A+Y+L D A +++ +L GVS+S+VV+FA +LG+ Sbjct: 14 DLMRLIQIKFSRLSKGQKLIAEYILKNYDKAAFMTAARLGTSVGVSESTVVRFANELGFS 73 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L+ AL E + ++ + D + ++K + + ATL ++ Sbjct: 74 GYPKLQKALQELIKNKLTTVQRIELQNDYYSDG--DALKGVLKADMENIRATLEKINQNV 131 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSPD 180 V + A+RI + G+ +S +A+ + L I N V + + + D Sbjct: 132 FENVVQSIFEAKRIYIIGLRSSTALAEFLGFYLNVILQNVRIVSYGISDIFEQMINIGED 191 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++ I + + KV+AIT + L +A + L + + Sbjct: 192 DLVIGIGFPRYAAKTIDVLAFAQDRSAKVVAITDSLLSPLASKADYALIAQSNMASF--- 248 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + + A + + L IA+ ++ + E + K Sbjct: 249 -VDSLVAPLSVINALVIAVGMREKDRISTTFGSLEQIWK 286 >UniRef50_C3RI70 Phosphosugar-binding transcriptional regulator n=4 Tax=Bacteria RepID=C3RI70_9MOLU Length = 284 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 44/277 (15%), Positives = 114/277 (41%), Gaps = 3/277 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN R+ L +++ L DY+ P+ ++S+ +++ +S ++ + +KL Sbjct: 1 MNIFSRL-DNLTDLTTNEQTLVDYMKNNPERFINMSADEISAACFISIPTIYRLCKKLEL 59 Query: 61 KGFPALKLALSEALASQ-PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G LK+ +S ++ E ++ + ++ + K+ + + A+ N+ Sbjct: 60 NGLAQLKVMVSTSIRDYLKEKKTIDYNYPFSQNETQYQITMKMKELYEQTLIASNNLIDL 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++L + L++A+ I + + +NF +++ +IG + + L +S Sbjct: 120 DQLRLIASALKNAQFIDMYTSAGNLYFVENFKFQMSEIGRFVNVPVEEYQQLLAAASSDK 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN- 238 + + + +S+ G ++ + + ++ I+ T +L + LY E N Sbjct: 180 EHIAIVVSFEGRGMIVDKIVKLLKKNNTPIILISSTTLKSLVSLCDYNLYLSPYENHYNK 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 +S S + L D ++ + D + + + Sbjct: 240 ISSFSTRLSLLYLLDCIYTCYFKLDYDKNVKYKTETY 276 >UniRef50_C3RH23 Predicted protein n=2 Tax=Bacteria RepID=C3RH23_9MOLU Length = 294 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 48/274 (17%), Positives = 106/274 (38%), Gaps = 6/274 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + ++ + L +K + DY++ P +S +LAN + S S++ + +KLG KG Sbjct: 13 IIDKMNT-LENLTNQEKAVVDYIIANPKALLEMSVNELANASYTSASTITRLCKKLGTKG 71 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + +K + + + + + + + A+ T ++ + Sbjct: 72 YADMKFIYVSEYSEMMKLKDSLKVVPFSRNSGIDDIIHTMPLIYSRAIDHTRSMLDRNTV 131 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD-- 180 +++ A+ I L G G + +A+N +KL +IG +A A + D Sbjct: 132 IRVSNLMKRAQVIDLYGDGINFEIARNICYKLDEIGISANAYN--SIQWNHCKRLQQDKI 189 Query: 181 -DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 + +S+TG + AA + + L+ITG L + + E Sbjct: 190 PSFSILLSHTGKNPSMVDAAKRLKQYNIPSLSITGNVDKRLLNLTDYNFQIMITENTFEF 249 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRH 273 +++ + + D+L +LI + + + Sbjct: 250 STVIFTMSSLYILDILVASLIVHNYDKIERHLEE 283 >UniRef50_A4IT25 Transcriptional regulator n=5 Tax=Bacillaceae RepID=A4IT25_GEOTN Length = 262 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 41/253 (16%), Positives = 93/253 (36%), Gaps = 19/253 (7%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 ++ ++ D + DY++ P ++ ++LA VS +V++F +K+G GF K Sbjct: 5 EQIAQFSELDYAIYDYVVKHPHEVAYMRIRELAEAVHVSPPTVLRFCKKVGCDGFSEFKT 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L + + +R TL + E + + T+ Sbjct: 65 KWKLHLRENERTSIISSQEALREF-----------------FERTLTADYERTILDAATV 107 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + A +I G G+SG++A+ + + ++D + +++A+S Sbjct: 108 IARADHVIFVGSGSSGILAEYGSRYFSAFQKFSVYIKDP--FFPIYGHYFTNCVVIALSV 165 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 +G + GG +++IT +L + + L A + ++ Sbjct: 166 SGETQHTLAQVHRFKEKGGTIISITNRKHCSLANISDYNLTYYATAERMGQTDVTTQLPV 225 Query: 249 GMLTDLLFIALIQ 261 L + L + + Sbjct: 226 VYLLERLAKEMYR 238 >UniRef50_B0N0Q7 Putative uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N0Q7_9FIRM Length = 296 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 118/283 (41%), Gaps = 5/283 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + +I + + + D++L + + + ++A + S+++VV+FA+ LG+ Sbjct: 1 MFLIQKIEELMVNHPDARYAVGDFVLHEQKNLHNYTINEVAEHSYTSKATVVRFAKTLGF 60 Query: 61 KGFPAL-KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 +G+ K+ +SE + V + D + + + K ++ T ++ Sbjct: 61 EGWREFMKVFISEMKYLEQHQGDVDANYPFTEDSSVDEIINNIKKVQIESIQDTADLIET 120 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L + L A+ I++ G+ + + + F K++ IG + + + + + Sbjct: 121 DMLEMATSYLLKAKHIVIFGLSPNIFLGELFRRKMITIGKSIDIAK-LGEMGIISRTLGS 179 Query: 180 DDLLLAISYTGVRR--ELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 DD + ISY+G E +L V+ IT N L+++ S L ++E+ Sbjct: 180 DDCAIMISYSGNNEKGEPMRYLPVLLDNQVPVIGITSGGDNYLRKKLSCVLTISSKERLY 239 Query: 238 -NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ + + + + LF +D + H +++ Sbjct: 240 TKISNFATEESIHFILNCLFSCYFARDFQNNNHFKLHHSKVLE 282 >UniRef50_C7NDE7 Transcriptional regulator, RpiR family n=2 Tax=Leptotrichia RepID=C7NDE7_LEPBD Length = 286 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 115/266 (43%), Gaps = 1/266 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + ++ ++ + ++K++ADY+L + LS++ LA +A VS+++VV+F +KLG + Sbjct: 2 IINKL-EKKENFTNNEKEIADYILRHLEEIHLLSAENLAKKAFVSKATVVRFCRKLGVER 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + + L + + + + + + + + + AT + Sbjct: 61 YREFQRRLDKEVEEMMKIKGLLSEEPVNSETKYDEIISIIPSLYERVIGATKLNLDTTVM 120 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + L++A++I + G G S ++A+ ++K M +G +AA ++ D+ Sbjct: 121 EKIIEKLKNAKKIEIYGTGISYILAKLTSFKFMTLGIESAAYDGLNEHYIISAEKGEKDI 180 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L IS +G + A+ + + V+ I + +++ S + A + + Sbjct: 181 ALIISLSGTNPYMIRIAEYLKKRNVFVVGIGNGSSEEIKKACSEYIEIHAPNYILSFEMV 240 Query: 243 SACHAQGMLTDLLFIALIQQDLELAP 268 S + D+ F +L+ + Sbjct: 241 SLFTGINYVLDIFFTSLLVLNYYKNI 266 >UniRef50_A5VV40 Transcriptional regulator, RpiR family n=37 Tax=Rhizobiales RepID=A5VV40_BRUO2 Length = 305 Score = 199 bits (508), Expect = 7e-50, Method: Composition-based stats. Identities = 57/281 (20%), Positives = 111/281 (39%), Gaps = 5/281 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + R+ Q ++SD++LA +L P A + ++A AGVS+ +V +F + LG Sbjct: 18 DIITRLHVVAQEGSKSDRRLAGLVLADPHYASKAAISEIAARAGVSEPTVTRFCRALGCD 77 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G K L++ALA + + I + + + + AA+ + Sbjct: 78 GVRDFKFFLAQALAIGGQYLTAEIPARDVRE---SRIATAVTDAAIAAIQRAGDGVDMGV 134 Query: 122 LHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + L + ++ G G S ++A +L ++G A D ++ + Sbjct: 135 LMKVAERLAAGGPVLCLGSGGMSSMLATEMENRLFRLGIPVNAQVDGQLQRMYAAVTTHE 194 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +LA S +G R + A + G + +AIT + L + A + E Sbjct: 195 TTVLAFSVSGFARSVVEAVLVARQYGAETVAITAAG-SDLARAADMLIPFQPNEDGNIYK 253 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 SA + + D++ A + E +R + + L Sbjct: 254 PTSARYGLLAILDMIATAAAEARGPKVLESLRRIKHSLNTL 294 >UniRef50_A4CAD1 Transcriptional regulator n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CAD1_9GAMM Length = 283 Score = 199 bits (508), Expect = 7e-50, Method: Composition-based stats. Identities = 64/281 (22%), Positives = 123/281 (43%), Gaps = 11/281 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + RI++R L QS++ +A +L A S +LA A VS +S+ + A+ L Sbjct: 1 MDIVSRIKERLGHLRQSEQLVAQLILENLQFAASASIGELAQRANVSHASITRLAKALDC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +KL L+++LA I ++ R + K A + + ++ Sbjct: 61 DNVRDMKLQLAQSLAVGERF--------ISENNSQREDIPAIYKAIHAILDLNAGLIAQT 112 Query: 121 KLHECVTMLRSARRIILTGI-GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++ E + S+R ++ G+ G S +VAQ +L ++ + A D + T + Sbjct: 113 QVEEAARCIASSRHTLIFGVGGGSSVVAQECHNRLFRLDVLSNAYSDPVMMRMTAASVDV 172 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+++ +S TG+ ++L AA G KV+AI +AL A+ L E Sbjct: 173 CDVVVVLSLTGLPQDLIDAASIAKDYGAKVIAIC--PDSALADVATFHLPIKTNESDYIF 230 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +A +A D+L + + + E++R + + + Sbjct: 231 TPSTARYAMLAAVDVLASEVAILTQKKSREKLRRIKHELDE 271 >UniRef50_C4Z9F6 N-acetylmannosamine kinase n=4 Tax=Clostridiales RepID=C4Z9F6_EUBR3 Length = 310 Score = 199 bits (508), Expect = 8e-50, Method: Composition-based stats. Identities = 56/281 (19%), Positives = 117/281 (41%), Gaps = 8/281 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L RI +Y +++ K LA Y+ D A L++ ++ G+S+S+VV+FA LGYK Sbjct: 7 DLLNRINAKYSTMSKGHKLLATYITDNYDKAVFLTAAKMGETVGISESTVVRFATSLGYK 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P + AL E + ++ S G + E +++ + + TL + Sbjct: 67 GYPDFQKALEELVRNKLNSVQRM--EVTYGRISQSQILETVLQSDRDKIKTTLEKIDADA 124 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD--MHALLATVQASSP 179 V + +R+I + GI + +A A+ + + + + L + Sbjct: 125 FDLAVDTILQSRKIYIVGIRSCAPLASFLAFYMNLMFEDVCLLTTNSSSELFEQMVRIGK 184 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD+++ IS+ A + KV+ IT + + +S L ++ + Sbjct: 185 DDVIIGISFPRYSMRTLKALEFANNRSAKVITITDSIHSPMNLYSSCNLIADSDMASI-- 242 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + A + + L +AL + + + + E + + Sbjct: 243 --VDSLVAPLSVINALIVALCMKKQNIVAKTLTELEDIWNE 281 >UniRef50_UPI000196C8C2 hypothetical protein CATMIT_03055 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196C8C2 Length = 277 Score = 199 bits (507), Expect = 9e-50, Method: Composition-based stats. Identities = 56/278 (20%), Positives = 113/278 (40%), Gaps = 5/278 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 ++ Q L +S+K L DY++ + ++S+ ++ + VS S++ + KL G Sbjct: 1 IYDKLEQL--SLTESEKTLIDYVVEHSEDIMNMSAADISKNSYVSVSTIYRIIDKLELSG 58 Query: 63 FPALKLALS-EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 A K + + Q E SV + R ++ + K++ +++TLN+ + ++ Sbjct: 59 LQAFKSHIHFDRERYQKELVSVDYNYPFRINNTNHEIMTKMLNLYDQTLHSTLNLVNLDE 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V + A I L + +A+ F +++IG + + + + D Sbjct: 119 FGKIVQKMYDANVIALFPSIGNFFMAECFRQNMLEIGKDVIVEKQIFYQTKVAETLKKGD 178 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE-QATNSA 240 L + ISY + M + + I+ + L + + LY + E A Sbjct: 179 LAIVISYANRTPHVEDFIRVMNKNQVTTVLISSTKESELSKLVDYHLYFASYEDSEEKIA 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPE-RIRHSEAL 277 S S+ + L D L+ +D E + RI H L Sbjct: 239 SFSSRVSLQFLLDCLYACYFNKDYEKNIDYRIEHYIEL 276 >UniRef50_C8P486 Transcription regulator n=1 Tax=Lactobacillus antri DSM 16041 RepID=C8P486_9LACO Length = 277 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 129/283 (45%), Gaps = 17/283 (6%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L I+ L + +KK+ +L +P+ + ++ +LA +A V +++ +FA+ +G Sbjct: 5 FLKSIKLISADLTRQEKKIVRVVLNEPEAVQAMTILELAKKARVGTATISRFAKHVGCVD 64 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F K L+ + Q + + +++I ++ T ++ S +L Sbjct: 65 FADFKSYLTTSNLIQAKRL------------SESSILDEVISYYKQSLAETKSLISLNQL 112 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + ++R A ++ + G+G+ G AQ +LM++G N+ A+ D + SP D Sbjct: 113 KKITRLIRKANKVYILGVGSFGYNAQELNQRLMRMGINSCAICDSSMMSIIDTIISPKDT 172 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 +LA S +G E+ A + G + +IT F+ + L +R+++ L E++ N + Sbjct: 173 ILAFSVSGNTIEVCDAVQKCREKGVVITSITAFSNSVLAKRSNNILLIKNTEKSPNYNFM 232 Query: 243 SACHAQGMLTDLLFIALIQ-----QDLELAPERIRHSEALVKK 280 ++ + DLL L++ +++ E + + KK Sbjct: 233 NSQFTINYVIDLLTEILLEHPTYLKNMNKTIEEVLRIKEANKK 275 >UniRef50_A5KNM9 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KNM9_9FIRM Length = 291 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 55/280 (19%), Positives = 117/280 (41%), Gaps = 6/280 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L ++++ + +K +A+Y+L D LS+ +LA + S+++VV+ +QKLG G Sbjct: 2 LLEKLQEH-KNFTAHEKDVAEYILSHLDQISELSAGELAKASYTSKATVVRLSQKLGLNG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK+ L+ + + + + + + + + L A+ T + + Sbjct: 61 FQDLKITLTAEINQKKRIDQLLANEPVTAESTYDDIVKTLPALYDKAVTNTRLSLDKNSM 120 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 +L+ A I + G G S ++AQ+ A+K+ +G +A +++ + + + Sbjct: 121 KRISQVLQKAECIDIYGTGISYILAQSAAFKISTLGLECSAYESINSHYLAARKHKKN-I 179 Query: 183 LLAISYTGVRRELNLAADEMLRV-GGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 IS TG + A + V+ I G L++ + + + Sbjct: 180 AFLISLTGSNHTVICMAKYLREATETYVVGIAGPYHTELKKWCHEIVEIPNRDALLSLDV 239 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 I++ + D+ F L+ + E E R S ++ L Sbjct: 240 ITSFSGATYILDIFFALLLSKRYE---EHARSSMEMLNHL 276 >UniRef50_B7GSI0 Transcriptional regulator, RpiR family n=1 Tax=Bifidobacterium longum subsp. infantis ATCC 15697 RepID=B7GSI0_BIFLI Length = 289 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 58/255 (22%), Positives = 98/255 (38%), Gaps = 1/255 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L RIR L + +K+A + L D L +A E GVS +VV+ LG Sbjct: 12 SILARIRLALDALDPAQRKVARFFLENSDVIGDLPIATVARETGVSAGTVVRTCADLGCH 71 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ +++ ++ A + I+ + + Sbjct: 72 GYREMRILIARDNAIRSLLEQRGHARADGEAGSEGERIIARIRGMLDMLRELPDCLDAGA 131 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + M+R AR I++ G S VA N +L++ G VRD + P D Sbjct: 132 FNRALEMIRDARGIVIVASGLSSGVAANLESRLLRYGRLVTFVRDPLGQDISASLLKPGD 191 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++AIS +G R A + G LA+T F ++L RA+ L N Sbjct: 192 LIIAISGSGENRHTVHAVEVATANGADALAVTSFANSSLATRATTTLVASTPATTFNDEL 251 Query: 242 I-SACHAQGMLTDLL 255 I ++ ++ + L Sbjct: 252 IDTSRLPLDIVIESL 266 >UniRef50_A8S4W0 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S4W0_9CLOT Length = 283 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 55/280 (19%), Positives = 108/280 (38%), Gaps = 6/280 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + I +RY+ L +S K +AD+LL + ++A+ G+S +S+++F++ +GYK Sbjct: 3 NIIDEINKRYENLTKSQKIIADFLLENYALVPFETLNEIAHRIGLSTTSLIRFSRTMGYK 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + LK + + + + PS + + + ATL + EK Sbjct: 63 DYTDLKKNIQDLIKVKVSLPSRFGELS-EQGGTPNDLLLRCRDIAVNNIEATLRLQDTEK 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASSPD 180 L V + SA + G+ A A L +I ++ + Sbjct: 122 LDLAVDWISSANHNYVLGLRTCFSPAFYLAVVLSQIKKKVRLIQGIASTYPEEITDVEEG 181 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ S+ +E A M R G KV+ ITG ++ + A + Sbjct: 182 DVCTVFSFPRFYKETVNIAHFMRRRGAKVIIITGKDIRPVKPYGDIIIPCSAVGPSFKD- 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + A L D + ++ ++ + E + E ++ + Sbjct: 241 ---SYVAVHFLIDYIISSIAAKNKDEGIEVVSKIEEILSQ 277 >UniRef50_B1M7S3 Transcriptional regulator, RpiR family n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M7S3_METRJ Length = 312 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 61/283 (21%), Positives = 117/283 (41%), Gaps = 8/283 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + RI Q Y L+ + +++A ++L P A L +LA+ GVS ++ +FA+ +GY Sbjct: 9 SVAQRIAQAYPSLSAAHRQVARFVLDHPLRAATLPVNELADLVGVSVATANRFARAVGYA 68 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + AL + +P + + + + + + + AT E Sbjct: 69 GYAKFRAALVLGY-EKALAPVEKLRGGREQPTTVSGILDGALADIVRNIEATRRGLDGET 127 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAA---VRDMHALLATVQASS 178 V +R ARR+ + G+G+S A A L + + T++ + Sbjct: 128 CGRAVEAIRQARRVYVVGLGSSSWPAGILARNLDVNREDVHLLATLEGPGFAARTLRRLT 187 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 DDL++A++ + A+ + G VLA+T + L A+ LY + Sbjct: 188 ADDLVIALATPRYFADTVRLAEIARKHGAAVLALTDGPHSPLVATATLALYAQTDCHYFA 247 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++ + L + L A ++L P R +EA++ L Sbjct: 248 ----ASDASLTALVEALASAFAHATVDLVPAATRVTEAVLPWL 286 >UniRef50_B6GAY7 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GAY7_9ACTN Length = 288 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 118/258 (45%), Gaps = 4/258 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I Y L+ ++ +ADY++ P ++++ +A E+ S +SV +FA++LGY+ Sbjct: 6 SVINEICSLYDQLSDGERSIADYMMANPFDVASMTTRDIAQESETSAASVSRFARRLGYE 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F AL +AL + + D E ++ + TL++ + Sbjct: 66 SFS----ALRQALLRDEAAYDDRGQLAVISIDAPAAALETVLMVKNRELTDTLSLLDARE 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V +L + I +G + VA + ++ L ++G A A++ + +P D Sbjct: 122 LVRAVHLLERSVSITFAAVGNTIPVALSASFLLGQLGLRCACAPTTEAMMLDSLSLTPRD 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++ +S +G + LN D ++ + IT + L +RA+ L+ ++ ++ Sbjct: 182 VIVFLSKSGHSKRLNKMMDNVIDSETPTIVITNQPSSPLARRATCVLHAATHDKMLSTEL 241 Query: 242 ISACHAQGMLTDLLFIAL 259 + ++ + ++LF+ L Sbjct: 242 PFSHNSINYIIEVLFLLL 259 >UniRef50_Q46ZY9 Transcriptional regulator, RpiR family n=74 Tax=Burkholderiales RepID=Q46ZY9_RALEJ Length = 358 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 108/283 (38%), Gaps = 8/283 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + RI + L + +++A+Y+L P A + + A VS ++ +FA+ LG+ Sbjct: 42 SISERIARSLPALTPAHQRMAEYVLANPFRAATMRIDEFATAVQVSVATANRFARALGFD 101 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P + L +P + +++ + A + AT + Sbjct: 102 GYPQFRAELVRGF-EATLAPVERLRSELERPTTAAEAFAASLDNAAANLEATRRALDADA 160 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLM---KIGFNAAAVRDMHALLATVQASS 178 V+ + +A R+ + G GASG ++ L ++ + A + S Sbjct: 161 CERAVSAILAAERVYIAGFGASGFLSGLLQHGLEMHCRMVTSVAGAGGASHAARQLFKLS 220 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P DL++AI++ + A G ++LA+T + L A LY A + Sbjct: 221 PADLVIAIAFPRYVSATVVLAQRAKARGARLLALTDGPTSPLAPIADIALYAQAANRL-- 278 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S ++ L + L A+ + +E L+ L Sbjct: 279 --SANSDANVLALIEALCGAVAHRAERPVKAAAEMTEFLLPWL 319 >UniRef50_B0PG82 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PG82_9FIRM Length = 296 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 111/279 (39%), Gaps = 5/279 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +++ L +S+K A YL+ L+ ++ E S +++++ + +GY+G Sbjct: 11 LKTKLQLILPSLPRSEKAAATYLVENLHRIGSLNLNTISAETNSSGATIIRLCKHMGYRG 70 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F + ++ P +R + +I +N ++ TL + S ++ Sbjct: 71 FLDFR----NSVRMAEYPPYDGGDAVPAEHASIRELMCAVIDKNNETVHNTLALIS-DQY 125 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 LR A I + G G + + Q K MK+G + D + + D+ Sbjct: 126 EPAALALREANIITMFGNGDAIIPCQLIGMKFMKVGKACVVLNDQDMQMFCASSIRSGDV 185 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 LA+S+TG + + A G + +T + L + S+ L+T ++ I Sbjct: 186 ALAVSHTGRSKSVVEAMRIAYERGAITIGVTASAKSPLLKHCSYALFTGTVDETDTGDII 245 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S A+ + + L++ + + E + ++ ++ Sbjct: 246 SRRIAEQTILETLYLRAVDDAGKDLEEVKKQGAKVIAQM 284 >UniRef50_B2IRS9 Phosphosugar-binding transcriptional regulator, putative n=36 Tax=Streptococcus RepID=B2IRS9_STRPS Length = 283 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 56/280 (20%), Positives = 114/280 (40%), Gaps = 13/280 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + I ++ + ++++A Y L LSSQQ+ + +SQ+++ +FA+K G+ Sbjct: 5 DIATVIDSHFEEMTDLEQEIARYFLQAETIQDDLSSQQVTQKLHISQAALTRFAKKCGFT 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ +Q S + +++++ + T ++ E + Sbjct: 65 GYREFIFQYQHEAENQANQVSKH-----------SPLTKRVLRSYSNMREQTQDLIDEVQ 113 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L ++ A R+ G G+SGLVA+ + M++G A+ D T + Sbjct: 114 LERIAQLIEDAERVYFFGTGSSGLVAREMKLRFMRLGVVCEALTDQDGFAWTTSIMDENC 173 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L+L S +G + + + +G K + + N Q + + Q + Sbjct: 174 LVLGFSLSGSTPSILDSLLDAKEMGAKTVLFSSVP-NKDSQAYTETVLVATHSQPSYIQR 232 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ISA DL++ ++ + E + E+I +S KKL Sbjct: 233 ISAQLPMLFFIDLIYAYFLEINRE-SKEKIFNSYWENKKL 271 >UniRef50_Q9KGC3 BH0181 protein n=3 Tax=Bacillus RepID=Q9KGC3_BACHD Length = 241 Score = 196 bits (500), Expect = 6e-49, Method: Composition-based stats. Identities = 42/253 (16%), Positives = 103/253 (40%), Gaps = 19/253 (7%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 + + + + +Y+ + ++ ++LA+E VS +++++F +K+ GF K+ Sbjct: 5 EVIASFNELEMSIYNYICQHAEKVAYMRIRELADETHVSTATILRFCRKVDCDGFSEFKV 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L L + ++P + I + EE++ E + Sbjct: 65 KLKMHLEKEKKAPIKSSQHAIAEF-----------------FERAFRGDLEERISEAAAL 107 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + A +I GIG+SG++A+ A +G + ++D + + + +A+S Sbjct: 108 VADAENVIFIGIGSSGILAEYGARYFSALGKLSMYIKDFSYPIH--SKLRQNSVTIALSV 165 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 +G +++ + G K+++IT + + + A L E+ A+I+ Sbjct: 166 SGETHFTITQVNQLKQEGSKIISITNNKFSTIAKVADVNLSYYVSEEFFEKANITTQVPV 225 Query: 249 GMLTDLLFIALIQ 261 + + + L + Sbjct: 226 VYILEAMARELYK 238 >UniRef50_D1AP79 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AP79_SEBTE Length = 261 Score = 196 bits (499), Expect = 7e-49, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 118/266 (44%), Gaps = 18/266 (6%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M IR +Y+ L +++K++ Y++ + R L + LA+ S +++V+ ++K+G+ Sbjct: 1 MKIENLIRDKYKNLNETEKEILRYIISNSNKIRGLRIKDLADAVFCSPNTIVRMSKKMGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF +K + E L + VPI D + T + + E Sbjct: 61 TGFSEMKHVIFEEL--EKNFSQVPISEDGLYKD----------------LLKTKELINSE 102 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L ++ + I + G+G S L A F+ +L +G A + D HA+L + Sbjct: 103 LLDYLAALIVKKKNISIFGLGPSRLSADIFSMRLTFLGIAAISFIDQHAMLFYANKIKEN 162 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ L IS++G ++ + A G ++++TG + N L + A H ++ + A Sbjct: 163 DICLFISFSGEQKGILGPAVIAKGRKGVIISLTGLSDNELSRIADHSMFFKTTSMYYDGA 222 Query: 241 SISACHAQGMLTDLLFIALIQQDLEL 266 I++ M+ D LF ++ + Sbjct: 223 DITSRVPADMVLDYLFSKMVLIMKDE 248 >UniRef50_Q21ZX8 Transcriptional regulator, RpiR family n=4 Tax=Comamonadaceae RepID=Q21ZX8_RHOFD Length = 310 Score = 196 bits (499), Expect = 8e-49, Method: Composition-based stats. Identities = 62/279 (22%), Positives = 113/279 (40%), Gaps = 6/279 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L RI + S + + +L P S +QLA+ AG S +V++ + LGY Sbjct: 4 KVLARIAETMAHAPTSRRSVLAMILQDPQRVLDESFEQLAHRAGSSVPTVMRTCRDLGYP 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G KLAL++ LA P+H +++ D + V K+I+ A+ + Sbjct: 64 GLREFKLALAQELAV----SGSPLHRRVQLHDGAQEVISKVIRGAATAVSGVQAQLGVAE 119 Query: 122 LHECVTMLRSARRIILTGIG-ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + A R+ +G S +A + +L ++G + A D+H L + Sbjct: 120 VEAAADAIVRASRVDCYSVGVTSSFMASDMQARLFRLGLVSNAYLDIHLQLVSAATLGTQ 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 ++ AIS+ G L A D G V+A+T L + A L E Sbjct: 180 GVVFAISHVGGMPSLIEAVDVAHSQGATVIALTQ-QETELAKHADIVLGIHVPEDPIMHV 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 A + +++ + + Q+ +LA +R+ ++ Sbjct: 239 GTEAYLVHLTVIEIVTVLVAQRLGDLAVKRLGGVREVLS 277 >UniRef50_C5EP47 Transcriptional regulator n=2 Tax=Clostridiales RepID=C5EP47_9FIRM Length = 294 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 55/280 (19%), Positives = 117/280 (41%), Gaps = 6/280 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +++++ + +K +A Y+L + +S+ LA+ + S+++VV+ +QKLG G Sbjct: 2 LLEQLKEQL-NFTKHEKDVALYILEHREQIPGMSAGDLASASLTSKATVVRLSQKLGLAG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + LKL L + + ++ I + L A+ T + Sbjct: 61 YQELKLRLVAEINQDNRISQMLANDPITDKSSYADIVSTLPVLYDKAVTRTRLSLDTNSM 120 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + +L+ A I + G G S ++AQ +K +G ++A +++ ++ + Sbjct: 121 NRINNVLQKAECIDIYGTGISYILAQAATFKFATLGVESSAYESINSHYLAARS-HKKTV 179 Query: 183 LLAISYTGVRRELNLAADEMLRV-GGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 IS+TG R +N A + V+ I G + ++Q + + + Sbjct: 180 SFLISFTGANRTVNSMARYLREATNNHVVGIMGPHSSDIRQWCHEIVEISNRDSLLSLDV 239 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 IS+ A + D+ F L+ + E + S ++K + Sbjct: 240 ISSFTAANYVLDIFFALLLSRRY---KEHAKSSIEMLKHM 276 >UniRef50_C1B8E5 Putative RpiR family transcriptional regulator n=1 Tax=Rhodococcus opacus B4 RepID=C1B8E5_RHOOB Length = 289 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 61/276 (22%), Positives = 107/276 (38%), Gaps = 4/276 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L IR LA S++++AD + +P S+ +A AG S ++V++ Q LG+KGF Sbjct: 14 LSAIRAVAPKLAPSERRVADVCVERPQDVAWWSAADVAEHAGTSTATVIRACQNLGFKGF 73 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 +++ L L + P +D + + + L E+ Sbjct: 74 QHVRMLLLRDLGAADTEPVGTPP----AEDKGAALVRAVFSGLATDLAGALAPLDEDAFE 129 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 VT L A R+++ G G SG A A + + G +A A D T + D+ Sbjct: 130 RAVTALAEAERVLVVGNGGSGPSAATLAVRFILNGRHAEAPTDAVIQQLTAGRLTSRDVC 189 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 LA+S +G+ + G V+ +T + + L +++ L S Sbjct: 190 LAVSDSGLNSVTLRPVEAARAAGATVIGVTSYARSTLVEKSDIGLVIGGGTGPWGGLGAS 249 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 A Q L IA+ + + A + +V Sbjct: 250 ATVVQIAFLISLQIAVSRARGDAAEAAAETFKQIVP 285 >UniRef50_A6LTU2 Transcriptional regulator, RpiR family n=3 Tax=Clostridium RepID=A6LTU2_CLOB8 Length = 281 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 120/282 (42%), Gaps = 6/282 (2%) Query: 1 MN-GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M+ ++ ++ ++++ +K+A Y+L P++ L+ ++LA +GVS ++V +F LG Sbjct: 1 MSEVYQKMAEKIPNMSKAQEKIAKYILAHPNSTPFLTVEKLAKLSGVSIATVTRFVIFLG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 YKG+P ++ Q S + I D + +++ + T+ + Sbjct: 61 YKGYPEFLRD-TQESMQQQVSKAKRIRIDSDSSDSEERDIYNIFEDDVNNIKLTMEDLNI 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 +L + V +L +A+RI + +S ++ + L + N + + + + + Sbjct: 120 YELRKSVNLLLNAKRIYIVARRSSAVLGMFLKYYLDLMFNNVNLIEHIEQIPKQISGVNN 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +D+++ I++ R + R G ++IT + L + L I++ Sbjct: 180 EDVIIGITFEKYARSTVEIFTHLKRKGATTISITDSMLSPLVPYSDITLTAISKGTRF-- 237 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 I + A L + L ++ ++ + + E +K Sbjct: 238 --IESFAAPLSLINALIASIEKEKKDFFNSNVELLEEACRKF 277 >UniRef50_C7H192 RpiR familytranscriptional regulator with phosphosugar-binding domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H192_9FIRM Length = 266 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 60/248 (24%), Positives = 108/248 (43%), Gaps = 4/248 (1%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L +++++AD +L A +S +LA + S+++V + KLGY + +L L+ Sbjct: 17 QLYSAERRIADCILADVKWASVATSAELAKASHSSEATVTRLCHKLGYANYRKFQLELAR 76 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 + Q E+ + +DPL L + AT+ + +L + +++LR+A Sbjct: 77 DVLEQQETEARKRP----PNDPLHQALLDLQNNRQEEVQATIQALNLVQLRKVLSILRAA 132 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVR 192 I + G+S VA + + KL +G + A +P D LL IS G Sbjct: 133 EIIEIEANGSSLPVAMDASLKLGSLGKRCMISPVPEKARSFASALTPKDALLLISSAGRC 192 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLT 252 L AA + G V+ IT +AL AS+ L Q S + + + ++ Sbjct: 193 EALETAARAAKKNGTPVILITCDKRSALAGHASYTLLASNRIQRIASDMMPSQLSAALVV 252 Query: 253 DLLFIALI 260 + L+ L+ Sbjct: 253 EALYYLLV 260 >UniRef50_A4XR90 Transcriptional regulator, RpiR family n=2 Tax=Pseudomonas RepID=A4XR90_PSEMY Length = 309 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 64/282 (22%), Positives = 114/282 (40%), Gaps = 8/282 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L ++ + L S +K+AD++L P A L+ ++LA S ++V + A+ + +G Sbjct: 16 ILRKLAEVAPQLQPSLRKVADFILRHPLKAATLTIEELAQATHTSPAAVNRLAKAMELRG 75 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + +LK L L + D + E+L + ++ + A + N Sbjct: 76 YISLKAELVATLQDMVSPVDKLRDELAQRPDGAFGLHEQL-QIASSNLGAAASNNDAAVF 134 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR---DMHALLATVQASSP 179 + L ARRI + G G S +A A L+ +A A+ + A + Sbjct: 135 EAVIGRLLGARRIYILGFGNSAYMAGLAAANLVPFCDDATAISMEGGNENAAYRLAAITE 194 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+LL IS + A G VLAIT + L + A + L+ AE Sbjct: 195 RDVLLTISLPRYSLDTLQLARFARERGACVLAITDSPASPLVEIAEYSLFAPAEHPVL-- 252 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 IS+ A L + L ++ ++ E +E+++ L Sbjct: 253 --ISSNAAVLALIEALVAGVMARNKEAVSLAQELTESVMAYL 292 >UniRef50_B8DD46 Phosphosugar-binding transcriptional regulator, RpiR family n=17 Tax=Listeria RepID=B8DD46_LISMH Length = 245 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 99/254 (38%), Gaps = 22/254 (8%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 +++ L Y++ D + ++L+ VS +S+V+F +KLG +GF K+ L + Sbjct: 9 QFTETEHHLYRYIMDNRDKVMFMRVRELSEVTHVSPASIVRFTRKLGCEGFSEFKVKLKQ 68 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 + + + + T+N + + L ++ A Sbjct: 69 EATREVKKKTADTVEVLEEF-----------------FERTMNRDYDHVLDAAAEIINEA 111 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVR 192 ++ GIG SG++A+ + + ++D + +++ +S +G Sbjct: 112 DLVVFFGIGTSGILAEYGSRFFSNMKKRTFYIKDPFYPNPG-EQFKNKAVMIILSVSGET 170 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLT 252 ++ A M + G ++++IT + N L + + ++ + +I+ L Sbjct: 171 DQVLEQAQNMQQYGSRIISITNTSHNTLAGLSDVNIPYYVTQEMVDKTNITTQIPVLFLL 230 Query: 253 DLLFIALIQQDLEL 266 + A+ +++ Sbjct: 231 E----AMAKKNYNQ 240 >UniRef50_C8NIR7 RpiR family phosphosugar-binding transcriptional regulator n=2 Tax=Lactobacillales RepID=C8NIR7_9LACT Length = 256 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 97/252 (38%), Gaps = 6/252 (2%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 +GL ++K L Y+ + +S +L+ A VS +S+V+ +KLGY GF + K L Sbjct: 5 KGLTNTEKYLLAYIEEHIEEMPSISIVKLSERANVSTASIVRTMRKLGYDGFTSFKHDLK 64 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 + E+ S ++ + ++ +N + T+ + + V + Sbjct: 65 KQYRFANENLSTFKSLEV-----VDQKIRAVVVKNEQEVRRTIEQLDSRAIEDAVQAIFG 119 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGV 191 A+R+ L G S ++A K + D + + + D+ + IS G Sbjct: 120 AQRVYLFSRGLSEMIASEMEIKFHLLERTCEQYVDPNIIKTISHRLNAQDVAIIISLNGH 179 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY-TIAEEQATNSASISACHAQGM 250 EL AA + ++ +T + L + + +E + + + Sbjct: 180 TEELVEAAKVCQQNEVPIVLVTANGASPLAKLSDITFVGYKSESSYFPDYEVRSRLPLQV 239 Query: 251 LTDLLFIALIQQ 262 ++ +L A + Sbjct: 240 ISRILLDAYAIR 251 >UniRef50_A6DTP0 Putative transcriptional regulator, rpiR family protein (Fragment) n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DTP0_9BACT Length = 262 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 56/250 (22%), Positives = 108/250 (43%), Gaps = 6/250 (2%) Query: 27 LQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIH 86 + A + S +A +AGVS++SV +F++ +G K P LK AL + A + Sbjct: 1 SDLEWAGNASIHDMAAKAGVSEASVTRFSRSVGCKNVPDLKKALVSSFAIGQRFLEGHMD 60 Query: 87 NQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGA-SGL 145 + V + + A+ S++K+ + +++ R+++ G G S + Sbjct: 61 PITEESGAIGQVVKGI----IEALNTVNTQTSQQKIEQTASLVNELERVVVFGSGGGSTV 116 Query: 146 VAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRV 205 +A + ++ + G N + D + D L+L IS TG E+N +A + Sbjct: 117 IADDAVNRMFRFGVNITSYGDFLMQRMVAATLNEDSLVLVISTTGQIAEINESAQIAKQY 176 Query: 206 GGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLE 265 G KV+AIT + L Q A L +E + ++ +A + D + + L + Sbjct: 177 GAKVVAITR-GDSPLAQLADIHLEVHIQEDEGIYKATASRYALLAVIDAIALELAVLRKD 235 Query: 266 LAPERIRHSE 275 + E +R + Sbjct: 236 SSKETLRRIK 245 >UniRef50_A8F3C1 Transcriptional regulator, RpiR family n=7 Tax=Thermotogaceae RepID=A8F3C1_THELT Length = 275 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 50/277 (18%), Positives = 114/277 (41%), Gaps = 12/277 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + + L+ S+KK+A Y+L +PD H S + A VS++++ + +K+ +KG Sbjct: 2 IFDYLLGIFDRLSDSEKKVAMYILERPDDVIHYSITEFARVVDVSETTIYRVIKKMKFKG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + A K+ L + P + + L E++ ++ L Sbjct: 62 YQAFKIELIRQTSGVKSVP-------LTNMETLDEYVEEIKSLA----ERMKTTLKKDDL 110 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + +++ I G+G S +VA+ + L +GF++ D H + DL Sbjct: 111 QKAADWIVQSQKTIFFGVGLSSVVAEYGSLLLSLLGFSSFCYNDPHVQVIVATGLCKKDL 170 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++++S++G R+ + VG + +A+T + L LY+ + + Sbjct: 171 VISVSHSGNIRDTVKSTQVARDVGARTVAVTAGINSPLSSVVDIALYSPVA-RFEKYEFL 229 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + + ++LF ++++ + ++K Sbjct: 230 RGNLGEMAVLEILFKMVLKKIYGEKESHLNDLSEVLK 266 >UniRef50_A4EBN8 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBN8_9ACTN Length = 285 Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 58/278 (20%), Positives = 112/278 (40%), Gaps = 3/278 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +R ++D+ +A YLL + L+ +LA E S +++++F +KLG G Sbjct: 2 ILDSLRNS-ASFNETDRAIATYLLNHTGDLKTLTMAKLAQETYTSNATIIRFCKKLGLSG 60 Query: 63 FPALKLALSEALA-SQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + L + L + ++ + +V + D + + L + T K Sbjct: 61 YRELIMQLIQEISGDYLLAATVDHNRPFGSTDSIEAIEGNLANLLKGVIDQTKIELDSAK 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + SA RI + G S L F L+K+ + D V+ P D Sbjct: 121 LSIIAKAVLSAPRIYIFAKGESYLAGCIFRNNLLKLDRHVTMADDGGLQTLHVKNGRPGD 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-NSA 240 L L +SY+G+ + + A + G K IT F+ +AL ++ L E+ A Sbjct: 181 LFLFLSYSGIHYDYSKYAAALSERGIKPCLITAFSDSALARQCDTVLLIPKSERVIGKVA 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + S+ + +++ + QD + +++ + Sbjct: 241 NYSSMISLTYTLQVIYSLIFNQDYQENYRVKHEADSFI 278 >UniRef50_C2MLM8 Transcriptional regulator n=1 Tax=Bacillus cereus m1293 RepID=C2MLM8_BACCE Length = 280 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 56/278 (20%), Positives = 112/278 (40%), Gaps = 6/278 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ I+Q Y L++ +K+A YLL QP + ++ + GVS+++V++F + Sbjct: 1 MDLKKIIQQEYNQLSKGQQKVAKYLLEQPGEFAVKLASEIGEQVGVSETTVIRFCYSIKL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF L+ + E L S +++ + K+++ + + T+N E Sbjct: 61 SGFSELQKMVREQLLLMQSSLGQYFSSKLELAEQPH-FYAKVMERDCQYIQQTINNIDEN 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNA-AAVRDMHALLATVQASSP 179 ++ + V L +I + G+ +S A L + N + + LL T+ Sbjct: 120 EIEQVVDQLIKTEKIYVLGLKSSFSAANWLTMTLGLVRGNVQILHPETNDLLCTLSEMDH 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 L+ IS+ +E A+ G V+ IT +++ A + E+ Sbjct: 180 RSTLITISFHRYLKETIKVAEMAKEQGAFVIGITDSPLAPIREYADAIFSMYSSER---- 235 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 ++I A + + + +D E +R E L Sbjct: 236 STIDATPVLFSFLNAIVAGVSIKDKERFEKRKDRYEKL 273 >UniRef50_C3RRE4 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RRE4_9MOLU Length = 290 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 45/281 (16%), Positives = 99/281 (35%), Gaps = 7/281 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + + + ++ + Y+L + +S++ LA E + S++++F QK+GY Sbjct: 16 MNLVDLLNDS-KQFNETQNIICQYILNHSEDVVKMSARALAKETYTNASTIIRFVQKIGY 74 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + + K+ L L +I + + +K+ + + T N S + Sbjct: 75 ENYNDFKIHLVHDLKEYQA-----ADIKITEKEKSISIVDKISELEKNVIEKTKNQLSLQ 129 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ +L+ I A+ +A A + L + Sbjct: 130 QIEYIAELLKKTTYIDFISSDANACIADYACHLFFLERKIANNYTTSNQQLYLTLTELKE 189 Query: 181 DLLLAISYTGVRRELNLAADEMLRVG-GKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 ++ IS G ++ E+ + K++AITG + + + L I Sbjct: 190 HVVFVISRRGEDEKILKVVQELHKNKEIKIIAITGRKESPIARYCDEILSAIHIGSFVEL 249 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + + + LF L D + + E + K Sbjct: 250 RDMIFQVSAQYIINCLFSLLFTDDYQSIVQFNDEYEKIYLK 290 >UniRef50_A8U8R6 Putative uncharacterized protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8U8R6_9LACT Length = 256 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 58/272 (21%), Positives = 108/272 (39%), Gaps = 18/272 (6%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + + Q Y L ++D ++ Y++ + + + +L + S+SS+V+ A+KLG+ Sbjct: 1 MDLEVLVNQHYHELNENDLQIISYIMKHKNECQTMPIVELGQKTHTSKSSIVRLAKKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF K +L + + + ++ D AT + ++ Sbjct: 61 SGFSEFKYSLKNDSEQVQRNETQVNFSSMQSLDS----------------QATSKLFNQT 104 Query: 121 KLHECVTMLRSARRIILTGIG-ASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASS 178 +L + + A+RI G G V +F + + + +A + Sbjct: 105 ELTPILKEIHGAKRIFCYGTGWGQRDVLSDFRRNFVPLEKFFILLSAQRELQMAVASTIT 164 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 DDLL+ +S +G +E + + G +L+IT N L A+H LY A N Sbjct: 165 EDDLLIVLSLSGDIQEAKDEMNMLKLKGVPILSITNLRNNKLASMATHNLYFQATSIPLN 224 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPER 270 I + +TD LF A + ER Sbjct: 225 GEDIFSFLPLFQVTDSLFRAYFDYYQQNKDER 256 >UniRef50_B9Y9Y3 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y9Y3_9FIRM Length = 252 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 106/259 (40%), Gaps = 19/259 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ Y L S++ L Y+L P T + ++ ++LA++ GVS++ V+ +QKLG+ Sbjct: 1 MDFYS---NNYDLLTNSERSLLHYILDHPQTIQKMTCRKLADQCGVSKTVVINMSQKLGF 57 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +G+ L+ L + S E + E T + T+ +N E Sbjct: 58 EGYNDLRFFLKNRAKETGPAAS----------------VETVEAEITGNVTKTMQLNKPE 101 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + + +++ + + G S V L+ + + D + L + + + Sbjct: 102 NMRQAAQSIVNSQCVYVISRGTSKAVGNYLEHLLLTLNVKCINIPDYNLLNIIARQMTHE 161 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 ++L+AIS +G + A + G ++ +T F+ + L Q LY + T Sbjct: 162 EVLIAISLSGKTPIIVETAKIVKAYGNALITLTAFSNSPLVQYGDLALYCSSSTTDTKID 221 Query: 241 SISACHAQGMLTDLLFIAL 259 I + DLL + Sbjct: 222 DIVTRIGMFAVVDLLVHYV 240 >UniRef50_C6JEA0 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEA0_9FIRM Length = 291 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 54/282 (19%), Positives = 124/282 (43%), Gaps = 11/282 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ I ++ L+ +K+A+Y+L D + + +L+ + VS+++V++FA LG+ Sbjct: 15 MSLDQLIYEKIPSLSAGQRKVAEYILNNKDEFSYATLAKLSKDISVSETTVIRFAYSLGF 74 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F A++ L E + S P + QI+ + +K+ T A+ ++ +EE Sbjct: 75 DSFSAMQQKLREEILS---VPQRNVEGQIQN----QTFYQKVFSRETQALQDWISHINEE 127 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHAL-LATVQASSP 179 L + V L +A I++TG +S A F +L + N +++ + + + Sbjct: 128 LLDKTVEALLNADHILVTGARSSYHAANWFGNRLNLLLGNTHIIQEFYDPRFDLLNHITD 187 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 ++++I++ + AD ++G +++IT + + + + +S Sbjct: 188 KTVVISIAFARYTKWTYRYADSAKKMGATLVSITDSVSSPFFNISHYTILAA---PVKDS 244 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+ L D + + + ++ ER++ E + Sbjct: 245 MGFSSPICMYCLFDAIISKIHDERKDMIVERLKQYEDTYRDF 286 >UniRef50_D0BLW5 Transcriptional regulator, RpiR family n=3 Tax=Granulicatella RepID=D0BLW5_9LACT Length = 268 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 78/272 (28%), Positives = 134/272 (49%), Gaps = 7/272 (2%) Query: 10 RYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLA 69 L +DKK+A+Y+ T S LAN GVS SS+ K+ +K+GY + K+ Sbjct: 1 MKDFLTDTDKKIANYIEQNISTVLSSSIHDLANLIGVSSSSISKYIKKIGYASYSRFKVV 60 Query: 70 LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTML 129 L++ A PI Q+ +D ++ + KL T + TL + ++E L V + Sbjct: 61 LAQQNAQ-------PIDAQLDSNDTIKTIQSKLFHTITRSYEMTLELLNDELLETIVQQI 113 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYT 189 SARRI + G+GASG+V + +KL +IG N D H LA++ ++ D ++ ISY+ Sbjct: 114 HSARRIYMFGVGASGMVCNDLYFKLSRIGKNIIYHTDSHIQLASLSGATNQDFIIGISYS 173 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQG 249 +E+ A + L+ITG L +++ L E S++I++ + Sbjct: 174 SNTKEVITAFKIAKELSIPTLSITGIGNQQLDSLSTYQLKIPRHENTIRSSAITSRNDSF 233 Query: 250 MLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 L D+L++AL+Q++ + + S + L Sbjct: 234 FLIDILYLALLQKEEHRHFQNLEKSYRMTHPL 265 >UniRef50_C0EW96 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EW96_9FIRM Length = 306 Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 56/282 (19%), Positives = 122/282 (43%), Gaps = 9/282 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L RI ++ ++ ++LA Y+ D A +L++ +L EAGVS+S+VV+FA +L Y+ Sbjct: 22 NLLQRIEKKSSEFSKGQRRLAQYITENYDIAAYLTASKLGKEAGVSESTVVRFAYQLDYE 81 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNV-NSEE 120 G+P L+ A+ + + S + R + + V + ++ ++ + T+ EE Sbjct: 82 GYPELQKAIQVIVKTNSNSIQRMSLSSKRYQE--KGVLKSILYTDSERLRDTIQSGVDEE 139 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAV--RDMHALLATVQASS 178 + + V ++ ARR+ + G ++ +A + + N V L + S Sbjct: 140 EFNRSVMLINDARRLYILGARSAAYLAGLMGYYFKMMFDNVIIVDANSTSETLEQIYDIS 199 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D+++ I++ + A G K +A+T + + + A L ++ Sbjct: 200 DKDVMMGITFPRYSKRTICALQYAKNHGAKTIALTDNMQSPIVEYADCKLIAKSDVMTI- 258 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + + + + A+ + +R+ E L + Sbjct: 259 ---VDSLVCPLSVVNAMVTAIALLRKDDVEKRLMALEELWNE 297 >UniRef50_Q2J952 Transcriptional regulator, RpiR family n=3 Tax=Frankia RepID=Q2J952_FRASC Length = 319 Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 64/241 (26%), Positives = 107/241 (44%), Gaps = 3/241 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 IR GL S++++A+ L +P S+ QLA AG S ++VV+ Q LG++ Sbjct: 19 GLFATIRAALPGLLPSEQRVAEVCLARPGDVVEWSAAQLAEAAGTSTATVVRACQHLGFR 78 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF ++ L+ + + + DP+ + + + TA + L + Sbjct: 79 GFQHFRVELARESGAAALRGEI---GRTDAADPVERLVDTVFGAATAVLADALGPLDRSR 135 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V +L A R+++ G G S VAQ+ A + + +G A A D A T + +P D Sbjct: 136 LAPAVDLLDRADRLLVIGNGGSAPVAQDAALRFLGMGRPAEAPGDSIAQELTARLLAPSD 195 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + L I+ +G AA+ G V+ IT +T L + A L A + +S Sbjct: 196 VCLVITSSGANEPSLRAAEAARTAGAAVIGITSYTAGPLAEIADISLVVGAPDWPISSDM 255 Query: 242 I 242 I Sbjct: 256 I 256 >UniRef50_B6FRS1 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FRS1_9CLOT Length = 237 Score = 193 bits (492), Expect = 6e-48, Method: Composition-based stats. Identities = 47/247 (19%), Positives = 108/247 (43%), Gaps = 20/247 (8%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 + + +Y++ ++++ ++LA+ VS SS+++F +K G G+ ++ Sbjct: 10 FNDLELVIYNYIMKNSSQVQYMTIRELADAVHVSTSSIMRFCKKAGCDGYAEFRVKFKLY 69 Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR 133 L S+ +I+ + L + +T+A E++ V M+R A+ Sbjct: 70 LESRK---------EIQPQNDLSELLHYFQGVHTSAFE--------EQISRAVDMVRGAQ 112 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRR 193 ++IL G+G+SG +A+ A +G + + D + ++ D +++A+S +G R Sbjct: 113 QVILIGVGSSGTLARYGARYFSNVGKFSQYIDDPYYPISRDTYI--DTVVIALSESGETR 170 Query: 194 ELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS-ASISACHAQGMLT 252 + + R K+L+IT + L + + L E+ ++++ L Sbjct: 171 QTIEMTESFKRHQCKILSITNKDSSTLSKISDMNLSYFVTERFVEGRYNVTSQVPVLFLM 230 Query: 253 DLLFIAL 259 + + L Sbjct: 231 ETIARRL 237 >UniRef50_C0CJY4 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CJY4_9FIRM Length = 296 Score = 193 bits (491), Expect = 8e-48, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 116/280 (41%), Gaps = 7/280 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + ++ + S K +A+YL+ D + + LA + GVS ++V++F++ LGY+ Sbjct: 17 DFFHKLTDNFDAFTYSQKTVANYLIDNQDNVAFDTLEDLAEKIGVSTTTVIRFSRVLGYQ 76 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ ++ + + ++ P ++ P + ++ + + TL++ ++ Sbjct: 77 GYSDMQKDIQNNVRTKAALPDRFDKTNLQI--PKNQLLQQSFTNDLNNIQKTLSLQKDQD 134 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL-ATVQASSPD 180 L + + M+ A+ + + G+ AS +A FA ++ +I N + + V ++ Sbjct: 135 LEQAIQMISDAQNVFVLGMRASFSIAHYFASRIGEIKANVRLISSTGLIYPEEVNSAQKG 194 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ +A + + G K++ IT ++ L + Sbjct: 195 DVCVAYMFPRYCKTATTILSWFRSCGVKIILITSQNITSVTNYGDIILPCTVSSVYYKN- 253 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + A LT+ L AL Q E + + +E ++ + Sbjct: 254 ---SYAAPLCLTNFLIAALAQASPEESRAMLERTENILSQ 290 >UniRef50_C5BXN6 Transcriptional regulator, RpiR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5BXN6_BEUC1 Length = 293 Score = 192 bits (490), Expect = 9e-48, Method: Composition-based stats. Identities = 66/279 (23%), Positives = 122/279 (43%), Gaps = 6/279 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RIR L ++++A +L +P+ S+Q +A+ AGVS+++VV+ AQ+LG+ G Sbjct: 13 VLARIRAHTGELHPGEQRVAHVVLDRPEWTIEASAQDVADAAGVSRATVVRTAQRLGFAG 72 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 +P L++ L+ + + + + A+ L + + + + Sbjct: 73 YPQLRVLLARDVGLSGAWTRTSGEPE-----EPIEIVRAYFHDVARAVDGMLALLAADDV 127 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V +L A ++ G G S +A A +L IG +A A D + + P D+ Sbjct: 128 RRAVDLLAGAATTLVIGNGLSSTLAAEAAMRLNAIGRSAEAPADYVSQSVKARLLRPQDV 187 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA-S 241 L +S TG AA G +++A+T FT + L + AS L + + Sbjct: 188 CLVVSGTGSTTPTLQAARAARSAGAEIVALTAFTGSPLGELASVTLVAGMGATSFRDEIT 247 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + QGML + L A+ ++D A + ++ + Sbjct: 248 TTTRIPQGMLLNALVGAVRRRDPAGAQDAQARLLEVIGE 286 >UniRef50_C0ZHI7 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZHI7_BREBN Length = 292 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 53/283 (18%), Positives = 115/283 (40%), Gaps = 7/283 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + RIR+ Y L K A Y+L +P T ++ + +G S++++++ + L Y Sbjct: 5 SVQERIRKHYPELTNQQKLAAKYILAEPKTVALQPAKVVGALSGTSETTIIRLSYALAYS 64 Query: 62 GFPALKLALSEALASQPESPSV--PIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ L+ + +L + + + ++++ A + TL + Sbjct: 65 GYSELQSEIRSSLLEKVPKADAIHSFRTAAVEMKGKQDLISYNMEQDVAYIRQTLGELQK 124 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASS 178 L + V+ + +A+ I++ G +S A A+ L + NA + + + Sbjct: 125 NHLLQAVSSIMAAKHILVVGFRSSYAPAHWLAFTLNVVRGNAHLYNGPVDDVNYLLTQIN 184 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D L++A+S+ E L A G K++ IT + + A L A Sbjct: 185 QDWLVIALSFPRYTSETILFAKAAKERGAKIIGITDDELSPIGPVADQILKVSAPAPT-- 242 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++ A + ++L ++Q D E +R++ E +++ Sbjct: 243 --ALKGMTAIFSMLNILISGVVQADGEQVQQRLKEYEETSRQI 283 >UniRef50_D0KI21 Transcriptional regulator, RpiR family n=84 Tax=Gammaproteobacteria RepID=D0KI21_PECWW Length = 285 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 47/277 (16%), Positives = 105/277 (37%), Gaps = 10/277 (3%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 +IR+RY L++ +++A Y+L ++ + +A A V S++++FA + GF Sbjct: 12 EQIRERYDSLSKRLQQVAHYVLDNTNSIAFDTVAVIAERADVPPSTLIRFANAFDFSGFN 71 Query: 65 ALKLALSEALASQPESPSVPIH-----NQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 +K L + S + + + + + N AM + Sbjct: 72 EMKQLFRMNLVEETASYTDRARLFRAMEADAVPETPLDILHEFARSNAQAMQQLAARTPQ 131 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL-ATVQASS 178 + L + V +L A I + G+ S VA + L + N V + + + + Sbjct: 132 DDLQKAVDLLAQAETIYIVGLRRSFSVATYLTYALSHLESNPILVNGLGGMFREQLSRVN 191 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D +++IS++ +E + ++ + G + + IT + L + C + Sbjct: 192 SRDAVVSISFSPYSQETVMVSEMAAKAGARQIVITDSQISPLATLSDVCFVV----KEAQ 247 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 + + A L L ++L + + + Sbjct: 248 VDAFRSQSATLCLVQSLMVSLAYRQGNGTEQSEKQRR 284 >UniRef50_C1TN65 Transcriptional regulator n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TN65_9BACT Length = 279 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 109/280 (38%), Gaps = 11/280 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +I + + + K+A ++L P A +++ Q+A S+SSV++FA LGY G Sbjct: 2 LKEKIIAGMKDFSTTQAKVARFILENPREAPFMTANQMAESVDTSESSVIRFASMLGYSG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 +P LK A+ L Q + + +++ + + + + + + Sbjct: 62 YPELKEAMKSLLLDQMTTIERMAVYDDDPRESP---CHRIMTLDMLDLGESQTNLNPQGI 118 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + A I + +S +A ++ L + + D + + + + Sbjct: 119 RSWASEVLEAPAIYMAAQRSSLALAGYLSFYLSWFHPSVHQLNDT-LIREQMTTAPKGSM 177 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRAS--HCLYTIAEEQATNSA 240 ++ IS+ R A +G + AI+ N + + A H L + Sbjct: 178 MIGISFPRYSRWTVDAMKLGRSLGLTLTAISDSPHNPMTE-ADPEHVLTAPCRHISF--- 233 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 I + A L + L +A+ + + A +R++ E L + Sbjct: 234 -IDSLTAPMSLMNCLIMAVADEMGDEAKKRLQELEELWTE 272 >UniRef50_C5RND9 Transcriptional regulator, RpiR family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RND9_CLOCL Length = 252 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 39/259 (15%), Positives = 97/259 (37%), Gaps = 22/259 (8%) Query: 10 RYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLA 69 L + +L Y+ + ++ ++LA E VS +++++F + +G +G+ K Sbjct: 6 NVNNLNDLELQLYRYISENMEKVVYMRIRELAQETHVSTTTIIRFCKAMGCEGYSDFKTM 65 Query: 70 LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTML 129 L L + S + + +D L V + + +++ ++ Sbjct: 66 LKLYLKEYKRNDSKLMLSTGILEDFLERVVNGDLD---------------DAMNKAAKLI 110 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYT 189 ++ GIG SG + A L +G A + D + L + + +AIS + Sbjct: 111 HEQENVLFIGIGNSGHSSGYGARYLSSLGKFALYIDDPYYPLT--GDIIKNSVTIAISVS 168 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-----NSASISA 244 G + + G K++++T + L + A + ++++ I++ Sbjct: 169 GESDSILRLTNIFKERGSKIISVTNRKSSPLSKMADVNISYYIQQESFADNGLEYRDITS 228 Query: 245 CHAQGMLTDLLFIALIQQD 263 + + + + + Sbjct: 229 QVPSIFIVETIAKKVHELM 247 >UniRef50_Q5WD27 Transcriptional regulator n=8 Tax=Bacilli RepID=Q5WD27_BACSK Length = 266 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 49/263 (18%), Positives = 107/263 (40%), Gaps = 17/263 (6%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 ++ L+ +++ L Y+ D +S L+ A VS ++VV+ +K+G+KG+ + K L Sbjct: 13 FERLSDTERYLLTYIHDHLDEIATMSIVTLSERAAVSTATVVRLMKKIGFKGYTSFKYKL 72 Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKL---IKENTAAMYATLNVNSEEKLHECVT 127 + I + L +G ++ +++N + T+ + S ++ + V Sbjct: 73 EQDKQM------------IDKEGSLSDIGNEIKQALQKNEEEVRRTIQLQSIGQIEDAVQ 120 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD-DLLLAI 186 + A +I + G S ++A+ A KL + D + + Q D DL + + Sbjct: 121 KMHDANKIYIFARGFSQMIAKEMAVKLQVLDKTCEMHDDPNIIRIKSQKMHHDTDLAIFV 180 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN-SASISAC 245 S G +EL A + + +T + L + + L E + + + Sbjct: 181 SLNGETKELVEACQNLSIRQVTTITLTTKVNSTLNKLSDMTLIGYKSEHSLIPDYEVRSR 240 Query: 246 HAQGMLTDLLFIALIQQDLELAP 268 + ++ +L A + + E Sbjct: 241 LSLNVIARVLLDAYVIRTKESVK 263 >UniRef50_Q5WBH0 RpiR family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WBH0_BACSK Length = 287 Score = 190 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 59/281 (20%), Positives = 120/281 (42%), Gaps = 7/281 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L +++ L +S K + DY++ ++ QL+N G S ++V++ +GY Sbjct: 3 NPLEVLKESAGSLPRSQKLVVDYMIDHYSEVGFMTVGQLSNNVGTSTTTVMRLMSNIGYS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ A + +L L +P + + ++ + + +N E Sbjct: 63 GYSAFQKSLQAHLKE-EAAPQIRLEKNLKNLSHNESWLHH-YELQLEQIQKANQLNVETN 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMK-IGFNAAAVRDMHALLATVQASSPD 180 L+E V ++ SA +I T + + VAQ L + +G + D + V + + + Sbjct: 121 LNEAVKLICSASQIYCTSVRSGLPVAQYLTHNLNRMLGNTKLTLADSSDWVDDVISFTEN 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DLL+ +SY L A++ + G VLAIT + L A A+ A Sbjct: 181 DLLIVVSYARYGERLLHYAEQAKKKGASVLAITDKFSSPLSAYADLVFACPADS----IA 236 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S ++ + + D L +L + E +R++ ++++ ++ Sbjct: 237 SHNSIVSSIFIVDYLIGSLSLEKTEYISKRLKEVDSILTQM 277 >UniRef50_C0ZE98 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZE98_BREBN Length = 295 Score = 190 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 55/279 (19%), Positives = 110/279 (39%), Gaps = 6/279 (2%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 RIR++Y L S K + + +P +++++A S+++V++F LGY G+ Sbjct: 7 ERIRKQYGKLTASQKIICKIAIEKPSLLAIHTAKKIAEFTNTSEATVIRFCYALGYSGYT 66 Query: 65 ALKLALSEALA-SQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 L+ + ++L + + L ++++ + A + L LH Sbjct: 67 ELQEEIKKSLLIGDQRKGPIQKYRDTEVTLDLSNYAHQVMESDIAYLQQGLQQIDYNLLH 126 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASSPDDL 182 + V + A RI++ G + A+ L I N + + L Sbjct: 127 DVVKSIVQANRIVVVGFRWCHIPAKWLFSALNAIKGNTHLYTGAVDNADYFLTERDQEWL 186 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++AIS+ E +G K+LAIT + + Q A H L + + Sbjct: 187 VIAISFPRHPSETVAMVHSAKELGAKILAITEGEFSPISQVADHLLKITTPQPV----AT 242 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S + ++L ++ D E +R++H + + KL Sbjct: 243 SGMPTLFSMLNVLIKGVMLHDSENVQKRLQHYDEISSKL 281 >UniRef50_Q2BFK6 Probable glucose kinase n=3 Tax=Firmicutes RepID=Q2BFK6_9BACI Length = 559 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 46/270 (17%), Positives = 107/270 (39%), Gaps = 11/270 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + I L + ++ +A Y++ ++ + + +L+ + VS++++ +F QKL + Sbjct: 300 SITTMIESNKHKLTKREELIAKYIISNVESVPNKTISELSKQINVSEATITRFCQKLEFG 359 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + L+L EA S + + + +K + E+ Sbjct: 360 SYNKLRLMAKEASVSTRLHEQSDMPGLTEVKETYSSMLKKFDALHITN--------DMEQ 411 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L++ ++ + ++ L GI VA+ +KL+K+G A A + + +VQ + Sbjct: 412 LNK---LVAGSEQVYLYGINEMSHVAEQLKFKLLKLGIRADAFLTPYQMEMSVQTLTRKT 468 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++ ++ TG +E+ + + G K + IT + L + L + +S Sbjct: 469 AVVGLNTTGYAQEVIGMLETAKKAGCKTIGITSQQDSPLAHASDLRLLIPSAGDIAGDSS 528 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERI 271 + L D++ L + + I Sbjct: 529 SIEEVSALYLVDIILKELQAGLKQKERKEI 558 >UniRef50_Q1JDL9 Transcriptional regulator, RpiR family n=21 Tax=Streptococcus RepID=Q1JDL9_STRPB Length = 280 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 109/272 (40%), Gaps = 11/272 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + +I + + +K +A + + T + L++ ++ +SQ+++ +FA+K G+ G Sbjct: 11 LITKIEASLEHMTSLEKGIAHFFITTDLTPQELTASEIVKRLHISQAALTRFAKKCGFTG 70 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + A +L E+ + ++++ + A + T + +EEKL Sbjct: 71 YRAFAFDYLHSLQESQETFQSIH----------LELTKRVLMDYDALINKTYELVNEEKL 120 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 ++ ++ R+ G G+SGLVA+ + M++G A D + + L Sbjct: 121 LNLAKLIDASERVYFFGKGSSGLVAREMKLRFMRLGLICDAYSDTDGFTWANSLVNENCL 180 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + S +G + A + + G K + +T + + Q + Sbjct: 181 VFGFSLSGKTNSVITALHQASQRGAKTVLLTTDNQTEFDDSLDI-IPVSSTHQLHYGNRV 239 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 S ++ D+++ ++ D + +++ Sbjct: 240 SPQFPLLIMMDIIYAYVLAIDKPHKEKIFKNT 271 >UniRef50_A6VVN8 Transcriptional regulator, RpiR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VVN8_MARMS Length = 286 Score = 189 bits (482), Expect = 7e-47, Method: Composition-based stats. Identities = 55/260 (21%), Positives = 108/260 (41%), Gaps = 8/260 (3%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I + Y L++ +++A +LL P+T + LA + V S++V+FA Y GF + Sbjct: 14 ISRNYDDLSKRLQQVARFLLEHPNTVALETVASLAEQCDVPPSTLVRFAAAFEYNGFSEM 73 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRL---VGEKLIKENTAAMYATLNVNSEEKLH 123 + +AL Q S S I + E+ N +M + S+E L+ Sbjct: 74 QNLFRQALVEQTSSYSERIKLSKSTASTTIDASHILEEFSSSNAFSMNHMNHHFSQEMLN 133 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLA-TVQASSPDDL 182 + V +L +A+ I L G+ + ++ FA+ L + + +L +D+ Sbjct: 134 KAVDLLENAQNIYLIGLRRAFPISSYFAYSLRHLDKTTHLIDGGGGMLIEQASNIRENDV 193 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++A +++ +E ++ + G +V+AIT + L + C E Sbjct: 194 IIATAFSPYAKETVNVSEYAFKAGAQVIAITDSKISPLAALSDVCFDIKEAEVL----GF 249 Query: 243 SACHAQGMLTDLLFIALIQQ 262 + + L L +AL + Sbjct: 250 RSLTSSMTLAQTLLVALAYR 269 >UniRef50_C9XQG1 Phosphosugar-binding transcriptional regulator n=4 Tax=Clostridium difficile RepID=C9XQG1_CLODC Length = 251 Score = 189 bits (482), Expect = 7e-47, Method: Composition-based stats. Identities = 55/259 (21%), Positives = 105/259 (40%), Gaps = 21/259 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M R ++ ++ + +Y+ + LS Q LA++ +++V+ +K+ Y Sbjct: 11 MEFYERAKKYEYKFTDTEDMIIEYMRKNKEEIVKLSIQSLADKFFTVPNTIVRLCKKMEY 70 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK L E L ++ + P + + TL + E Sbjct: 71 DGFSQLKNNLKEELKNEDKEPKNGFESD---------------------IKKTLELIDYE 109 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 K+++ +++ +R II+ GIG + + + ++ N H +L + Sbjct: 110 KINKVADIIQKSRSIIVYGIGQNIPLCEILVKEIRGGHDNITYYSQRHEVLHDIGKLGEQ 169 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ A+S +G +E+ AA + G KV+A+T N LQQ A LY + + N Sbjct: 170 DMFFALSLSGETKEVIEAAKTAVNKGCKVVALTHICENQLQQIADISLYCYSTIKQVNGY 229 Query: 241 SISACHAQGMLTDLLFIAL 259 +IS M+ + Sbjct: 230 NISDKVPIMMIMRAIIEQY 248 >UniRef50_C1I751 Predicted protein n=3 Tax=Bacteria RepID=C1I751_9CLOT Length = 246 Score = 189 bits (481), Expect = 8e-47, Method: Composition-based stats. Identities = 47/255 (18%), Positives = 96/255 (37%), Gaps = 16/255 (6%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 + + + L S++K+ Y+ + LA E S++ ++ +QKLG++GF Sbjct: 2 ENLAKLFNKLTNSEQKVFTYIYANQQKVIKMKINDLAKETFTSKTVIINLSQKLGFEGFS 61 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 LK L D V E L + T V + + Sbjct: 62 DLKYYLKSN----------------NSADDDIKVLEDLQYGLKQNIEKTFVVIEADLYKK 105 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 + A+ + + G S L+ +G V+D + L D+L++ Sbjct: 106 ISREVIEAKTVYVFARGTSKAAGYYLNHLLLTLGVKCIFVKDYNLLTLVGNTLESDELVI 165 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 IS +G ++ A+ G + +AIT F N L + + + L+ ++ + T + Sbjct: 166 LISLSGNTEKILEVANIAKVKGSRTIAITSFGNNELSKISDYTLHCVSNDTETKFNDSIS 225 Query: 245 CHAQGMLTDLLFIAL 259 ++ ++L ++ Sbjct: 226 RIGMFIVIEMLVNSI 240 >UniRef50_Q2SAA1 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SAA1_HAHCH Length = 283 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 56/270 (20%), Positives = 106/270 (39%), Gaps = 13/270 (4%) Query: 2 NGLLR---IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 N L I +RY L++ K++A +++ P T + +A +A V+ S++++FA Sbjct: 9 NLLELQQAITERYNDLSKRLKQIAQFVMDHPSTVAMETVSVIAEQAEVTPSALIRFAAAF 68 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQI-----RGDDPLRLVGEKLIKENTAAMYAT 113 GY GF ++ + L S I G + + + N ++ Sbjct: 69 GYDGFSEMQQLFRQKLVENSTSYRERIRLSSAQPVHSGKVTSHTILNEFVNGNLLSLEHL 128 Query: 114 LNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL-A 172 + S E + + +L +A+ I + G+ S VA + L +I + +L Sbjct: 129 PEMVSGESMDAAIKLLHNAKAIHVLGMRRSFSVASYLTYALRQIKRRVYLIDGSGGMLQE 188 Query: 173 TVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA 232 D+L+AISY+ +E A + G +++IT + L +S Y Sbjct: 189 QAAFLDKSDVLVAISYSPYAQETRAAVIKAYENGVPIISITDSRLSPLAPISSV--YFDV 246 Query: 233 EEQATNSASISACHAQGMLTDLLFIALIQQ 262 +E + + L L I + Q Sbjct: 247 KESEVRG--FRSLTSSLCLAQALVIGMAYQ 274 >UniRef50_B6G7X7 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G7X7_9ACTN Length = 303 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 61/276 (22%), Positives = 108/276 (39%), Gaps = 3/276 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ R+ +R S+ ++A + + L+ ++LA A VS SV +F +KLG Sbjct: 1 MDIKRRM-ERASDFTPSELQIARTVSALGPRLQSLTLKELALAAHVSIPSVHRFCKKLGL 59 Query: 61 KGFPALKLALSEALASQP-ESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 +GF LK+ ++++ A E V I+ DD V ++ + T ++ Sbjct: 60 EGFKELKVEMAKSDARHTGERGEVDINFPFAADDTADGVLAQMASVYETTLSDTRDLLDP 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L +L +A I + + AQ F +L+ IG +A + T AS Sbjct: 120 DSLAHAAELLDNALSIDIYTQSHNLYPAQMFCDRLLSIGRHATCFESIERQSRTALASDR 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA-TN 238 L ISY+G+ L+ + + + L S L+ E Sbjct: 180 THAALLISYSGLGPNLSTLLPILQERDVPTIFVGTPRGGQLNPGLSIYLHVSDRESLQNR 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 ++ A + D LF L +D E + + S Sbjct: 240 ITQFASHIAVQYVLDSLFGCLFARDYEQSRAFLERS 275 >UniRef50_A7G380 Transcriptional regulator, RpiR family n=1 Tax=Clostridium botulinum A str. Hall RepID=A7G380_CLOBH Length = 179 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 54/175 (30%), Positives = 93/175 (53%) Query: 107 TAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD 166 + T + +EKL E V +++A I L G+GAS +VA +F +KL++I +D Sbjct: 2 IDTINDTKELVDDEKLLEAVKAIKNAETIYLYGVGASAMVAMDFQYKLLRINKKVMFQQD 61 Query: 167 MHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASH 226 H LA + D+ +AISY+G RE+NLA +E + G +AIT + L A Sbjct: 62 SHLQLAVSVHITNRDVAVAISYSGNTREVNLAVEEAKKNGATTIAITKCGKSILSNIADI 121 Query: 227 CLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 L + E+ +IS+ +Q +TD LF+ + +++L+ + + ++ LV+ L Sbjct: 122 NLNIPSIEKDLRIGAISSRTSQLFVTDSLFLGIAKENLDKTEKNLINTRNLVEVL 176 >UniRef50_B4BI96 Transcriptional regulator, RpiR family n=1 Tax=Geobacillus sp. G11MC16 RepID=B4BI96_9BACI Length = 270 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 105/258 (40%), Gaps = 5/258 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L I +S+ +A+Y+L + +S LA S +++ +F Q+ Sbjct: 7 KLLNFIESSTDQ-TKSEIIIAEYILRNVEKIPKMSIYDLAEACHTSPATITRFCQRFENI 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F LK E S E + Q + E A++ T + ++ Sbjct: 66 TFKELK----EYARSFIEFNDTEVDCQNLKTKFNIKQINEYYDELHASLKQTEQLLRSKE 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V + ++++ G+ S L+A+N +K +++G A A + ++ ++ +P D Sbjct: 122 IIQVVHEIHRSKKVAFFGVTFSHLIARNAQFKFIRLGKYATAYSNHENQISEAESLTPRD 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L + IS++G R + + + G ++AITG L Q A + + + + + Sbjct: 182 LAVVISFSGETRFIVQLVKILKKRGIPIVAITGNEKGYLAQHAKQIIKVSSCKLKSFKSP 241 Query: 242 ISACHAQGMLTDLLFIAL 259 I + + +++ Sbjct: 242 ILEEINMLSVINSIYLVY 259 >UniRef50_Q03HS5 Transcriptional regulator n=2 Tax=Pediococcus RepID=Q03HS5_PEDPA Length = 248 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 43/255 (16%), Positives = 106/255 (41%), Gaps = 11/255 (4%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 L+ +++ + ++ + LS +L+ A VS +++++ +K G+ GF K ++ Sbjct: 4 DNLSSTEQFVWKFIQDNLELVPFLSIVELSERANVSTATIIRALRKKGFTGFSDFKHGVA 63 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 + +S+ + + I+ I +N + T+ + + + + V ++ Sbjct: 64 KNNSSKDFTNLERADSDIKSA----------ILKNEHEVTNTIKMINIPDIEQSVQRIKH 113 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGV 191 A+ I + G S L+A+ KL + N D + + P +L++ IS G Sbjct: 114 AKTIYIFARGFSELIAKELLVKLQLLNKNCQLSDDPNIIRTLSADIRPGNLVIIISLNGE 173 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS-ISACHAQGM 250 EL AA + + ++ IT + + + ++ L E A + + + Sbjct: 174 TPELIEAAKKTSKNKIPIILITTNADSTIGKYSTIELCGFKSETTYFPAFEVHSRLPLQV 233 Query: 251 LTDLLFIALIQQDLE 265 ++ +L + + + + Sbjct: 234 ISRVLLDSYVIRTQK 248 >UniRef50_C1DL90 Sugar isomerase (SIS) n=48 Tax=Proteobacteria RepID=C1DL90_AZOVD Length = 310 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 52/275 (18%), Positives = 98/275 (35%), Gaps = 13/275 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L I Y+ L + K++A+Y+ Q D +A V S++V+F+Q+ G+KG Sbjct: 24 LLQLITAEYESLPRQLKRIANYMSQQSDRVMVDRVSDIAQHCEVHPSAIVRFSQRFGFKG 83 Query: 63 FPALKLALSEALASQPESPSVPIHNQI-------RGDDPLRLVGEKLIKENTAAMYATLN 115 F ++ AL + +P +I + + I + + Sbjct: 84 FSEMQ-ALFREAYTDKATPIQNYQQRIRRMIANRSHKASGGELARECINATRSGLDRLAQ 142 Query: 116 VNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATV 174 E + + V +L A I + G+ S VA + L + + Sbjct: 143 ELDEREFDKAVDLLVEADNIYVVGVRRSFAVAHYMVYSLQHTNKRIHLISGLGGGYREQM 202 Query: 175 QASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE 234 ++ DL++A+S++ +E + L IT L ++A+ L Sbjct: 203 RSVREGDLVVAVSFSPYGKETQQCVRIARHHKARALVITDSQLAPLAKQANALLLVNEGS 262 Query: 235 QATNSASISACHAQGMLTDLLFIALIQQDLELAPE 269 + + A L LFIA+ + E Sbjct: 263 TF----AFRSLSATLSLCQALFIAVAYRMELKVEE 293 >UniRef50_B5XS91 Transcriptional regulator, RpiR family n=3 Tax=Enterobacteriaceae RepID=B5XS91_KLEP3 Length = 285 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 115/279 (41%), Gaps = 7/279 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN +I + GL+ ++ A++ L LS + A EAGV +++++ AQ+LGY Sbjct: 1 MNLREKIINEFGGLSPELQRAAEFSLQNASQLVVLSMRAFAAEAGVKPATLLRLAQRLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +G+ LK + L + ++ + + +++ + + A + T N + + Sbjct: 61 RGWSELKSDFIDDLGLRNDTYVSKAEK-MMARGTQTQLYKEVFQAHQANLTFTQNE-NAQ 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASSP 179 ++ + VT+L SA + + G AS +A + + + + + + + Sbjct: 119 EMEQAVTLLDSAENVYICGFRASFPIAWSLFYVYRLFNRQVSLIDGLASNIEVFTRELTN 178 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D +L S+ RE + G K+LAIT + L Q A L + + Sbjct: 179 RDCVLLTSFAPYSRESLDVLRAARQAGAKILAITDSPVSPLAQAADCTLLFSIDSPSF-- 236 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + + L + L L+ + A +I +E + Sbjct: 237 --FPSVVSGMGLAECLLAMLVVRHGREAVSKIESAERYL 273 >UniRef50_C3WYI9 Transcription regulator n=6 Tax=Fusobacterium RepID=C3WYI9_9FUSO Length = 282 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 48/284 (16%), Positives = 121/284 (42%), Gaps = 9/284 (3%) Query: 1 MNGLLRI-RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 MN + ++ ++ Y L +++K++A+++ P LS+ +L E GVS +SV++F++ +G Sbjct: 1 MNEIHKLYKKNYAKLTKTEKRIAEFISKNPKKLITLSALELGKELGVSDASVLRFSKNIG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 + F K ++ L+ + I + K+I + + L Sbjct: 61 FNKFSDFKNYVALELSEGN--LNERIVKNWNNFTSENDLANKIINADLRNIQDFLLNIDF 118 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAA-VRDMHALLATVQASS 178 E + + ++ +++I + GIGAS +AQ W + ++G+++ + L T+ Sbjct: 119 ELIERLIDLIEKSKKIYILGIGASRAIAQFMFWHIKRLGYSSECIIEGGFGLYETISKIK 178 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 ++LL+ ++ + + K + IT + + + A Sbjct: 179 KEELLILFAFPKFLNDEINTLKVIKEKKAKSVVITSSLFSEISFLGDIVFRVPIQNNAF- 237 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 +++ +++ +L +++ + E + + +KK + Sbjct: 238 ---LNSYMVPMEFCNIVLTSLFEKNKDKIYEEWKKNNN-IKKFL 277 >UniRef50_UPI0001BC5E7D RpiR family transcriptional regulator n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=UPI0001BC5E7D Length = 284 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 55/276 (19%), Positives = 116/276 (42%), Gaps = 8/276 (2%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 L DK + DY+L TA L+S ++A VS SSVV+ ++K+G++ F A K Sbjct: 9 SYKSDLTNKDKIILDYILRNKKTACFLTSNEIAELLNVSPSSVVRLSKKIGFENFSAFKK 68 Query: 69 ALSEALASQPESPSVP--IHNQIRGDDPLRLV--GEKLIKENTAAMYATLNVNSEEKLHE 124 AL +A Q S + +I D L + + + + A ++ ++K E Sbjct: 69 ALQMEIAEQEPSLDANEIPYEKIEQYDKLSDIELIKAFRQNVLKNITADISSKEDKKFIE 128 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 ++ A+R+ + G A +A F L I + + + ++ + +D+++ Sbjct: 129 SADIISKAKRVFIVGYRACAGLASTFGIMLSCIRPDVFVLNNNGPIVDRLIDLGKNDVVV 188 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 AIS+ A G K+++ T F + + Q + E + ++ Sbjct: 189 AISFNRYSGNTKFAVQIARDAGAKIISFTDFYTSPIAQGVDKVIINSVENFSF----YNS 244 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + M + + + ++++ +R+ E +++ Sbjct: 245 YASSMMNIETIVALVSKKNMAANKKRLMKMETYLEQ 280 >UniRef50_C4ZEF4 Glucokinase n=2 Tax=Clostridiales RepID=C4ZEF4_EUBR3 Length = 250 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 104/250 (41%), Gaps = 22/250 (8%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 + + Q + + +Y++ + ++ ++LA E VS +++++F +K+G +G+ +L Sbjct: 5 EMIKSFNQLEMDVYNYIISNEEKVVYMKVRELAEEVHVSTTTILRFCKKVGCEGYSEFRL 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L + ++S+ + L V + + T A E + E V + Sbjct: 65 KLKQEVSSKEQKKINL---------DLTAVKDFFERVQTQAF--------AENIQEAVKL 107 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 L A II G+G S + + A +G+ + A+ D + +A+S Sbjct: 108 LTKASSIIFVGVGNSSFIGKYGARYFNNVGWFSFAIDDP--FTPVFRGKGERIATIALSV 165 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN---SASISAC 245 +G + + A+++ R G +++IT +L + + + E +++ Sbjct: 166 SGETEQTLMLAEKLKRRGSSLISITNKANCSLAKMSDCNINYYVSEYKYKQDEDYDLTSQ 225 Query: 246 HAQGMLTDLL 255 A + +L+ Sbjct: 226 MAVVFILELI 235 >UniRef50_Q0KEK8 Transcriptional regulator, GlvR-family n=57 Tax=Burkholderiaceae RepID=Q0KEK8_RALEH Length = 302 Score = 187 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 51/274 (18%), Positives = 108/274 (39%), Gaps = 7/274 (2%) Query: 8 RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALK 67 R + L+ + A YLL P LS +++A AGV +++V+ +Q LG++G+ L+ Sbjct: 25 RSNFPTLSTQFQGGARYLLDHPQDVPVLSMRKIAASAGVQPATLVRLSQHLGFEGWQGLR 84 Query: 68 LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 +AL + + + + + +++ + + N+E+ L + Sbjct: 85 ELFVDALRGGSQPYARRARK-VVRESSSSRMLGEILDAQHHNL-DMIAANNEKTLQQAAE 142 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASSPDDLLLAI 186 +L A + + G + +A F + + D L ++ +P D +L + Sbjct: 143 LLSHAACVHVAGFRSCFPIAFTFHYVYRLFRSTVHLIRADAGTLEMELRGLAPKDAVLVV 202 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S+ +E A G KV+A+T T + A L E + + Sbjct: 203 SFAPYSQESIRVAAAARECGCKVIALTDSTVAPIALAADCTLLFSVESPSF----FPSVT 258 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A + + L L+ + + A + +E + + Sbjct: 259 AGVAVVEALVEQLLARKGKGAIRALEQAEGELHR 292 >UniRef50_A3IB77 Transcriptional regulator n=1 Tax=Bacillus sp. B14905 RepID=A3IB77_9BACI Length = 287 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 57/278 (20%), Positives = 113/278 (40%), Gaps = 7/278 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N RIR+++ L + K +A Y++ P +S+QL + S ++V++ + LGY Sbjct: 3 NYNERIRKQFNELTKRQKLVAKYIVDFPKEVAFQTSKQLGIASETSDTTVIRLSYALGYS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRL--VGEKLIKENTAAMYATLNVNSE 119 GF L+ + L S PI L+ + + +I+++T+ + ATL Sbjct: 63 GFSELQKEIQATLLEDSSPISDPIEGLRSTSKSLKDTNLIQHVIEKDTSYIRATLEQIDY 122 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASS 178 + + + +L S+ + I+ G +S A ++ L + N R ++ + Sbjct: 123 TQYKKAIDLLISSEKRIVIGFRSSYGPANWLSFSLNVVVGNTFLYRGEIEDSNYLLSLID 182 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 LL+AIS+ +E N + G +V+ IT + L + +A + Sbjct: 183 EKTLLVAISFPRYSKETNAFVKAAKKKGAQVIGITDDELSPLGLLSDILFKVVAPSPISL 242 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + L +LL + D +R+ + Sbjct: 243 KGA----TPTFALLNLLITGIAASDEIKVQKRMEDYDQ 276 >UniRef50_A7GA30 Transcriptional regulator, RpiR family n=10 Tax=Clostridium RepID=A7GA30_CLOBL Length = 259 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 51/254 (20%), Positives = 97/254 (38%), Gaps = 12/254 (4%) Query: 8 RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALK 67 L QS+ + Y+ + + +S Q+L+ + S +++++ +KL GF LK Sbjct: 7 NNILNTLTQSELSVLQYIDVHSNEVLTMSIQELSEKVFFSTATILRLCKKLNLSGFSELK 66 Query: 68 LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 L ++S S I +K++ + + + T + + L V+ Sbjct: 67 FTLKNNVSSNNSLKSTAIST------------KKIVTDLYSEIENTGRLLDTKTLDTIVS 114 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAIS 187 L S ++I L G + + + L+ G + V + +D+L S Sbjct: 115 YLLSNKKIHLFSYGLTNMAFEYMQRYLLATGRQTILYKTDTLAYKAVNNLTENDVLFLSS 174 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHA 247 TG A ++AIT FT N L + A LYT +E+ + I Sbjct: 175 STGSNPSTLKLAKIAKNSNTIIVAITPFTNNPLSKIADINLYTFIKERDFFDSDIKNRTC 234 Query: 248 QGMLTDLLFIALIQ 261 + D++ I+ Sbjct: 235 IFYIVDMIIECYIK 248 >UniRef50_UPI000196AB43 hypothetical protein CATMIT_01461 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196AB43 Length = 295 Score = 187 bits (475), Expect = 5e-46, Method: Composition-based stats. Identities = 57/274 (20%), Positives = 110/274 (40%), Gaps = 4/274 (1%) Query: 6 RIRQRYQG--LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 IR+ + + ++K+L YL+ Q + + + +A E ++ SSVV+F QKLG++GF Sbjct: 2 LIRESLEKCPMNPNEKRLGQYLISQGIQLENATVRTVAKEVFLAPSSVVRFVQKLGFEGF 61 Query: 64 PALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 K E + + + +D ++ K+ + T+++ + + L Sbjct: 62 NDFKKQYLEEIRYLSTHFQEIDSNRPFSQNDKNIVIANKIGLLYDETLQDTISLLNHDTL 121 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 E + + I + GA +A F K+MKIG S + L Sbjct: 122 QEAINRIEKKEHIAIVVSGAQKGIAYTFKEKMMKIGKKVDIFDSTDEAFYEACYCSSNTL 181 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-NSAS 241 + ISY+G + +++ + IT + N+L ++ CLY E+ N + Sbjct: 182 FILISYSGETSKCLFICHKLVERKLSFITITTYGTNSLSSQSDCCLYVSTREKLIDNLGT 241 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 S + L D+L+ + E + Sbjct: 242 FSFNLSLLYLLDVLYAGYFNTNYNEHLENKTVTS 275 >UniRef50_A1WPP9 Transcriptional regulator, RpiR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WPP9_VEREI Length = 310 Score = 186 bits (474), Expect = 7e-46, Method: Composition-based stats. Identities = 61/282 (21%), Positives = 114/282 (40%), Gaps = 13/282 (4%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 + R+ Y L +S +++ADY+L S ++LA A VS ++ +FA+ LGY + Sbjct: 16 IQRVAGMYAALPRSQQRIADYVLRHAFDVATASIEELAQAAKVSIATANRFARALGYSSY 75 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 P + L + + E I+ L +I ++ + AT ++++ + Sbjct: 76 PDFRADLLQVFKTALEPVEKL--RDIKPGTRLHDTLLAVIAQSVDNLQATRSMSNADAHE 133 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP---D 180 V LR + R+ + G G+S +A + A+ L N ++ V+ + Sbjct: 134 HFVLALRQSERVYIVGFGSSAFLASSAAYHLGLYCPNVHSIGGEGGAEQAVRRMNQLTAQ 193 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL+ IS+ + + G V A+T + L Q A H LY A + Sbjct: 194 DLVFGISFPRYSADTVRLLHFAQQRGAVVAALTDAPTSPLVQLAQHVLYAKANSALLS-- 251 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 S+ A + + L L Q + + L ++L+ Sbjct: 252 --SSNVAALTVLEALGAMLAQGQSN----ALAQARDLAEQLM 287 >UniRef50_A6LZ63 Transcriptional regulator, RpiR family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LZ63_CLOB8 Length = 288 Score = 186 bits (474), Expect = 7e-46, Method: Composition-based stats. Identities = 50/270 (18%), Positives = 120/270 (44%), Gaps = 7/270 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + +I R + L S+ ++A++++ + + + +A E VS++S+ +F +K+G+KG Sbjct: 8 VIAKIISRQKNLTFSENEIANFVINNAEFVINNTITNIAIETKVSETSINRFCKKIGFKG 67 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F K+AL++ + + + + + + + T ++ +E L Sbjct: 68 FNDFKIALAQDNFYRNLKANDKSR-------DNNSLIDSIASDYNELILNTCSLINEMDL 120 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V M++SA+++ + + S A +L +G A + D++++ SS DDL Sbjct: 121 IKVVEMIKSAKKVNIFSVFGSWQSAIELKQRLNMMGIKAESYNDVYSMKLCSANSSQDDL 180 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ I+ R++ + K++ IT + L + + T + N+ I Sbjct: 181 IIGITRNISVRDIQEPLISGRQNNAKIVTITSYDSPKLSELTDIKIITSDKLAIENNTVI 240 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIR 272 S D++ LI+ + + +++ Sbjct: 241 SDNMTFLFTIDVIVGMLIKSNKKYLQKKLD 270 >UniRef50_C6QNE5 Transcriptional regulator, RpiR family n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QNE5_9BACI Length = 260 Score = 186 bits (473), Expect = 7e-46, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 107/262 (40%), Gaps = 20/262 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I + Y L ++D + Y+L L LA + VS+SS+++ AQKLG+ Sbjct: 1 MKIEELINKHYNQLNETDFHILKYILNNKSECHKLGINSLAEKCNVSRSSILRLAQKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ ++ L Q + S +I +D + TL + Sbjct: 61 SGYSEFRVFLK--WQEQEGNNSDKSQAEILSND----------------ILETLKYIKTK 102 Query: 121 KLHECVTMLRSARRIILTGIGASGL-VAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E ++ A+RI + G G + L A + + ++ L ++ +P Sbjct: 103 DFSEMCKLIHRAQRIFIYGTGTAQLDCAFELQRMFLAVQKYLYVIQAQTELEMVIKDMTP 162 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DDL++ IS++G + A ++ G +++T N L + + LY + + Sbjct: 163 DDLVIIISFSGDTPAIFPAVQSLVAKGIPFISVTNLKNNRLARMTPYNLYANSSSNELSD 222 Query: 240 AS-ISACHAQGMLTDLLFIALI 260 + ++ + +++++LF + Sbjct: 223 GTKLNTFASFFIISEMLFSHYV 244 >UniRef50_C3RP06 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RP06_9MOLU Length = 261 Score = 186 bits (473), Expect = 8e-46, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 101/259 (38%), Gaps = 14/259 (5%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 + + L+QS+ + Y+ PD +S Q+LA S +++++F +KL + GF K Sbjct: 16 EIIKNLSQSELYILHYVYDHPDEVIDMSIQELAKAVAFSSATILRFCKKLNFSGFAEFKF 75 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 AL + + I D + + + + +T + E L E + + Sbjct: 76 ALKQ-----QNKEIANLKKPISSMDSITSLYDD--------IESTSLLIKERYLKEIIDL 122 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGF-NAAAVRDMHALLATVQASSPDDLLLAIS 187 + S +RI L G G S + L IG N + ++ DD+L+AIS Sbjct: 123 IDSNKRIHLYGEGISRIPVDYLEKLLFSIGRQNVYKYKSSRLAAHIASNANEDDILIAIS 182 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHA 247 +G ++AI+ +T NA+ A+ + ++ A Sbjct: 183 TSGNYPTTVKIVKLFNLNHATIIAISPYTKNAIADLANINFRFFVNHRENIDTEYTSRLA 242 Query: 248 QGMLTDLLFIALIQQDLEL 266 + D++F + + + Sbjct: 243 IFYIIDVIFKTYLVRKEKE 261 >UniRef50_C9RVZ8 Transcriptional regulator, RpiR family n=5 Tax=Bacillaceae RepID=C9RVZ8_GEOSY Length = 255 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 38/260 (14%), Positives = 88/260 (33%), Gaps = 19/260 (7%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 ++ ++ D + DY++ P ++ ++LA VS +V++F +K+G +GF K Sbjct: 5 EQIAQFSELDYAIYDYVMKHPHEVAYMRIRELAEAVHVSPPTVLRFCKKVGCEGFSEFKT 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L + + ++ TL + E + + Sbjct: 65 KWKLYLRETKRTAIISSQEALKEF-----------------FERTLTADYERTILDAAAA 107 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + A +I G G+SG++A+ + + ++D + ++A+S Sbjct: 108 IARADHVIFVGSGSSGILAEYGSRYFSAFQKFSVYIKDP--FFPIYGHYFHNCAVIALSV 165 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 +G G +++IT L + + L A + ++ Sbjct: 166 SGETSYTLAQVHRFKENGSTIISITNRKHCTLANISDYNLTYYATPERIGQTDVTTQLPV 225 Query: 249 GMLTDLLFIALIQQDLELAP 268 L + L + + Sbjct: 226 VYLLERLAKEMYRLLGRKTE 245 >UniRef50_B0NY52 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NY52_9CLOT Length = 256 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 55/271 (20%), Positives = 107/271 (39%), Gaps = 22/271 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + Q L+++D + DY+ +++ ++LA + VS+++V++F +KL Sbjct: 1 MRLEELLNQYSDRLSENDLYIWDYVEKHKKQCENMTIEELARKCNVSRTTVLRFTKKLSL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGF K+ L N + D + V K+ M + + Sbjct: 61 KGFGEFKVHLRME-------------NDDKKQDTSKAV--KVCLAYEEMMQDMVQ----Q 101 Query: 121 KLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E ++ A+RI + G G +VA+ F M V+ Sbjct: 102 DFKEISELIYQAKRIFVYGTGMVQKIVAKEFKRLFYFTDKRFYDFSGMTEYETVVKYVDS 161 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE--EQAT 237 DDL+L IS +G A ++ G +++IT N L + +++ LY EQ Sbjct: 162 DDLVLIISVSGEADFTIDFAKKVRIKGTPIISITKQKKNPLAEISNYNLYISTTMVEQNL 221 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAP 268 + + +L +++F+ ++ E + Sbjct: 222 CKGRYESMTSYYILAEMMFLRYLEYLEERSQ 252 >UniRef50_C0CX07 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CX07_9CLOT Length = 293 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 53/255 (20%), Positives = 105/255 (41%), Gaps = 15/255 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN R+ + L ++D + Y+ LS Q++A + ++ ++V++ ++KL Y Sbjct: 43 MNFEERVLRHEDQLNETDDDIVAYIRSHRQEIMKLSIQKIAADLFIAPNAVMRLSKKLEY 102 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK ++ + + + +++ + + + TL+ Sbjct: 103 SGFSELKFSVQNE---------------GEPEGTGKTISGRILGQLPSNIVKTLDTIDVL 147 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + M++ AR I G+G S + L + + + +H + V+ D Sbjct: 148 TLKKTAAMMKKARCCIFAGVGDSTYFCEMLGKNLRCLDCSVQFYQQIHDMFYAVRHGCRD 207 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L+ IS G L A E +G V++IT F N L + LY E++ Sbjct: 208 DMLIIISARGENDRLIEMAGEAKAMGMPVVSITHFYENRLAKACDVNLYFWGEDREVQGY 267 Query: 241 SISACHAQGMLTDLL 255 +++ +L LL Sbjct: 268 NVTDRSGLMVLVRLL 282 >UniRef50_A6M2C0 Transcriptional regulator, RpiR family n=50 Tax=Bacteria RepID=A6M2C0_CLOB8 Length = 249 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 39/245 (15%), Positives = 99/245 (40%), Gaps = 19/245 (7%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 + Q L + L Y++ + ++ ++LA+EA VS +++++F +KL +G+ K+ Sbjct: 5 EIIQSLNDLELSLYRYIMKNIEKVVYMRIRELADEAHVSTTTILRFCKKLNCEGYSEFKV 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L L + ++ ++ + K + + + LNV + Sbjct: 65 KLKLYLEENESTKV---------NNDTSIIVDFFKKLDNSELDRKLNVL--------CDL 107 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 ++ A ++ G G SG++ + A IG + + D + D +++A+S Sbjct: 108 IKKASNVVFIGTGTSGILCKYAARYFSSIGKFSMYIDDPYFPRNY--KLYEDSIIIAMSV 165 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 +G R + + R +++IT + + + + +++ + I+ Sbjct: 166 SGETRTVIDYISNIKRENTTLVSITNSENCTISKISDLNISYYVQQERLGISDITTQIPV 225 Query: 249 GMLTD 253 + + Sbjct: 226 LYIIE 230 >UniRef50_C5EFX0 N-acetylmannosamine kinase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EFX0_9FIRM Length = 290 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 60/261 (22%), Positives = 119/261 (45%), Gaps = 6/261 (2%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 R+ +Y L + KKLA+Y+L D S L+++ G++ S++ +F Q L Y GF Sbjct: 21 SRLSSQYSFLPKQQKKLANYILNHQDEVIRSSITMLSHKTGIAASTITRFCQSLSYSGFS 80 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 +K ++S+ + S + I+ D + ++ +KL+K ++ +T+ ++L E Sbjct: 81 EMKFSMSKKVLSNNDEAL------IQKGDSINVIAKKLLKSSSECFASTMRTIDLKQLEE 134 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 + +L SA I + G +S A LM G A D + +P+D+ + Sbjct: 135 VIHILMSAHNIHIYGQSSSYCSASYAQQMLMLSGLLGQAYNDTVNMNIVAHLLTPNDVAI 194 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 ++Y+G R +N A G K++ IT + + + A + LY E Sbjct: 195 GMAYSGESRNVNSALAIAKENGVKIVVITSAPYSTMAKLADYVLYYSHEIPDDIHYMFLP 254 Query: 245 CHAQGMLTDLLFIALIQQDLE 265 + ++ ++ +++ QD + Sbjct: 255 NLCEIIIWGIIQSSILLQDSK 275 >UniRef50_C7HVZ9 RpiR family phosphosugar-binding transcriptional regulator n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HVZ9_9FIRM Length = 272 Score = 184 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 108/281 (38%), Gaps = 18/281 (6%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + ++ I Y + +K +ADY + S + + N+ VS+SS+ +F+QK G+K Sbjct: 5 SAIVAIVDSYDKFTEVEKLIADYFIKNKHK-EDFSIKNIKNKLHVSESSITRFSQKCGFK 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ E S E+++ + ++ E+ Sbjct: 64 GYREFIYRYEEGFLKGISKSSFN--------------VEEVLNTYGRILNMFPSLIDNEQ 109 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + ++ ++ ++ GIG+SGLVA+ +L ++G A+ + + Sbjct: 110 IDRIADLIIKSKSVLFVGIGSSGLVAREMQSRLTRLGILVMAIDYQDEMRMRAVFQKENS 169 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 LL+ IS + + + A + G K + +T + + + E Sbjct: 170 LLIGISLSANKESVLFALKQAKENGAKTILVTSNSKDKFS-FVDEKVIIPTIEDLRGGNI 228 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERI--RHSEALVKK 280 IS + D + +I+ +LE ++ + + +++ Sbjct: 229 ISPQFPVLVFMDFCYNKIIKNNLEDDYRKLLHKKTIDALEE 269 >UniRef50_Q03HE1 Transcriptional regulator n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03HE1_PEDPA Length = 251 Score = 184 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 49/247 (19%), Positives = 98/247 (39%), Gaps = 17/247 (6%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 ++ Q L Q + + Y+ + + ++ + L+ ++ VS +++++F +K+G++GF K Sbjct: 5 EKVQTLNQLELFVYKYVTSHLEECKTMTIRDLSTQSHVSSTTILRFLKKMGFEGFSDFKY 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L P S I + T EK+ E + Sbjct: 65 VLRHRNDRTPASELSQDLGPIG-----------------QFLKQTATTEYTEKMEEVARV 107 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + + + G+G+SG +AQ A L G A+ D + L++ +S Sbjct: 108 VAQSNTRLFFGMGSSGSMAQYGARILSNYGMLTLAITDPFQPQPISERDYSKTLIILLSV 167 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 +G + A+ + G K++AIT + + L Q A + L E S + ++ Sbjct: 168 SGETEGVLTQANYYRQNGAKIVAITANSTSTLAQIADYSLTYDIPENKVGSLNFTSQIPV 227 Query: 249 GMLTDLL 255 L + L Sbjct: 228 VYLLEQL 234 >UniRef50_C9M9W1 Transcriptional regulator, RpiR family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M9W1_9BACT Length = 313 Score = 184 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 59/281 (20%), Positives = 120/281 (42%), Gaps = 11/281 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L +R+ + L++S KK+A Y+L P T +++QQLA ++G S+++VV+FA+ +G + Sbjct: 37 KILEELRRSFSTLSRSQKKIATYILENPTTVAFMTAQQLAEQSGTSEATVVRFARAVGLE 96 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GFP LK L + + + + G + + +I ++ TL + E Sbjct: 97 GFPNLKSKLQSCVEDRLTAAERLESYRTIGKK--ANLVQNVISQDLD--KETLPYINIED 152 Query: 122 --LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + ++ SA ++ L G+ ++ + + L N + + ++ + Sbjct: 153 SSIVALSKVICSAPQVYLIGLRSARALIEYLVAYLSWFLPNIVPLAG-DSFTESLGLADK 211 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 L+L IS+ + G +IT + L + + + L+ A Sbjct: 212 SSLVLGISFPRYTQLTIDCLSFAHDQGFLTASITDSEKSPLAKVSDYHLFVPCSHLAF-- 269 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 I + + L + +++ A ER+ H EAL K+ Sbjct: 270 --IDSLVLPMCAINALLLQIVECLGGEAQERLLHLEALWKR 308 >UniRef50_D2AU61 Putative transcriptional regulator, RpiR family n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AU61_STRRD Length = 334 Score = 184 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 59/282 (20%), Positives = 118/282 (41%), Gaps = 13/282 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + R+R+ G + ++ +A LL TA ++ +LA AGVS +VV+F +LG+ Sbjct: 55 SVAERVRRSLDGSSPGERLVARTLLASYPTAGLETAARLAERAGVSAPTVVRFVARLGFA 114 Query: 62 GFPALKLALSEALASQPESPSVPIHN--QIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ A + AL + + ++ SP D LR+ + + + + S+ Sbjct: 115 GYRAFQQALRDEIEARRASPLTLAQQLGDGVTPDSLRVSAGAIFR---QRLDESFAALSD 171 Query: 120 EKLHECVTMLRS-ARRIILTGIGASGLVAQ--NFAWKLMKIGFNAAAVRDMHALLATVQA 176 +L + +L ARRI + G S ++A+ + +L++ G R +L A Sbjct: 172 PELEAVLDLLADPARRIAMIGGRFSHILAEYLDLHLRLLRPGTRVLDPR-PESLAAFSVD 230 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 D+++ Y +R++ A + G KV+ T + + A + E Sbjct: 231 VGRRDVIVVFDYRRYQRDVVEFARRVHERGAKVVLFTDPWLSPASEAADLVIPVRVEAP- 289 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + + L + + ++ + + ER+R E +V Sbjct: 290 ---SPFDSLVPALALVETVVAGVMARLGKEGEERLRQCEEIV 328 >UniRef50_Q723C8 Phosphosugar-binding transcriptional regulator, RpiR family n=18 Tax=Listeria RepID=Q723C8_LISMF Length = 250 Score = 184 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 44/257 (17%), Positives = 97/257 (37%), Gaps = 19/257 (7%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L ++ + +Y++ D ++ + LA EA VS +++++F +K G GF ++ L Sbjct: 9 ELNDTELDIYNYIVANLDKVVYMRIRDLATEAHVSTTTILRFCRKFGCNGFSEFRVKLQL 68 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 L Q + + T + ++ V +LR Sbjct: 69 YLEEQKLAQIDMADET----------------TYIDFLKRTAQPEFKAQIQNAVEILRDR 112 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM--HALLATVQASSPDDLLLAISYTG 190 ++ G+G+SG++A+ A + A + D H S ++AIS G Sbjct: 113 ELVLFAGVGSSGVIAEYGAIYFSSLFTLALHIEDPLNHPFYHLSSKLSDKICMIAISVEG 172 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGM 250 ++ ++ KV++IT + + + + + ++ A+I++ Sbjct: 173 ENEDIIRYIHQLKAQNCKVISITNSAKSTIARLSDANIAYYINKEMYQEANITSQLPALY 232 Query: 251 LTDLLFIAL-IQQDLEL 266 + + + Q D E Sbjct: 233 TIENIAREIRTQIDKEK 249 >UniRef50_C1I4M4 Predicted protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I4M4_9CLOT Length = 264 Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 99/278 (35%), Gaps = 18/278 (6%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +LRI ++++A+Y L + S +L+ VS +S+ +F +K+G Sbjct: 5 IILRITHAKVKFTYVEEQIAEYFLSNREP---RSINELSKLLCVSPASITRFCKKIGLNN 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + L SE L S I + ++ +K+ Sbjct: 62 YKELMYLYSEHLKENNGIRSNKISSDLQ-------------NSYFKIFNNIDTNFDRDKI 108 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + + R + + +G S AQ+F ++ ++G + D A+ DDL Sbjct: 109 EKICEAIHNNRFMHIFALGLSATAAQDFKFRFSRMGKLVEVIYDKEAIEMASTLIKEDDL 168 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + + G + L A + G ++ ITG + + + + + T ++ I Sbjct: 169 VFIFTLRG-NKHLQKCAKLLREKGANIILITGNRNSKIVEYSDISVITDNLSGEESTGMI 227 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 SA + D L + + +E + K Sbjct: 228 SAQIPILIQID-LIHYYYVRKYSEVLDEWVSTEKVFNK 264 >UniRef50_C5BWC4 Transcriptional regulator, RpiR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5BWC4_BEUC1 Length = 335 Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 55/265 (20%), Positives = 98/265 (36%), Gaps = 1/265 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +R L + + A +++ P A S +LA +GVS +++ + A LGY Sbjct: 38 SPLQALRDALPSLTGALARAAAHIVDAPAEASRGSITRLATASGVSPATLTRLAGLLGYD 97 Query: 62 GFPALKLALSEALASQPESP-SVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GFPA++ A++ + + I I DDP V L+ ++ A + Sbjct: 98 GFPAMRAAIATEHGREVQGGWQRDIGTAIAPDDPADQVLGVLVAHSSRAARNAMGALDLA 157 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + +A RI L G + +L++IG A P Sbjct: 158 GATRAADWIAAAERIHLYGEWGDSVSLHELYLRLLRIGRPVWFHEGKQATRVAASLLRPG 217 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ +A+S G G + ITG L A L+T E + Sbjct: 218 DVAIALSRAGHDAVGEAFCALAQENGAHTVVITGDPEGPLADVADLVLFTGTREGTAWTD 277 Query: 241 SISACHAQGMLTDLLFIALIQQDLE 265 + + + LL++ + Q+ + Sbjct: 278 YFAGRASDTLTAALLWVLVAQRVPD 302 >UniRef50_C8Q2X6 Transcriptional regulator, RpiR family n=1 Tax=Pantoea sp. At-9b RepID=C8Q2X6_9ENTR Length = 283 Score = 183 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 58/275 (21%), Positives = 124/275 (45%), Gaps = 7/275 (2%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 +I+ L+ +++K+A +L A S QQLA AGVS SVV+FA+++G+ GF Sbjct: 4 QQIKDNMAELSPAERKIARAMLADYPGAGLGSVQQLAERAGVSLPSVVRFARRMGFGGFV 63 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 + AL + ++ Q + P + + + + E IK +T A+ +L +E ++ E Sbjct: 64 DFQQALRDEISEQAKGPLQRLETWVT-TESASALMEAAIKSSTLAIQCSLRDIAEYEIAE 122 Query: 125 CVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASSPDDL 182 ++ + ++ G G S +A F L ++ + + H + + + +D+ Sbjct: 123 ATRLIGAKEHHVILGGGRISQSLAMYFGRNLQQVRRGVDVLAENHHDRIQQIIDVNKNDV 182 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + + ++++ A E++ G ++A+T + + A L E Sbjct: 183 FVLFDFRRYQQDMYELAQEIVARGATLIAVTDTQLSPIASLAKVVLAIHVETPWLFDG-- 240 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 A +L D + ++++ + +R++ EAL Sbjct: 241 --YAAGIVLIDAIIASIMESQGDKTVQRLQQWEAL 273 >UniRef50_A9BVS1 Transcriptional regulator, RpiR family n=4 Tax=cellular organisms RepID=A9BVS1_DELAS Length = 292 Score = 183 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 111/277 (40%), Gaps = 6/277 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ IRQR+ L+ + +++A ++L P+ S + + AG +++V+FAQ LG+ Sbjct: 1 MSVQDDIRQRFAELSPALQQVARFVLEHPNDVVTASMRSVGTRAGSPPATLVRFAQWLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+P LK A ++ + + + G + + + + + +T + Sbjct: 61 DGWPQLKQAFAQDMGLGSDEAYGQRAKALVGRAGDHDLVGETFEVHRRNLESTERRL-GD 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL-ATVQASSP 179 L + +L AR + + G AS VA +F + + + + L +A Sbjct: 120 ALQQACALLEKARSVHVAGFRASYPVAFSFVYVYRLLRASVHLLDGQGGTLEMQCRAMER 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D LL +++ RE G +++A+T + L A L + Sbjct: 180 GDALLVVAFAPYSREALAVTQAARDAGCRIVALTDSPASPLALLADATLLFSLHSPSF-- 237 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + + L++ L L + + +RI +E Sbjct: 238 --FPSITSAVALSEALVELLASRAGKGVVQRIGQAEE 272 >UniRef50_Q6MTZ4 Transcription regulator gntR n=2 Tax=Mycoplasma mycoides RepID=Q6MTZ4_MYCMS Length = 278 Score = 183 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 112/256 (43%), Gaps = 9/256 (3%) Query: 21 LADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPES 80 +A+Y+L D+ ++ QLA S +++ +F + L G+ L + + + + + Sbjct: 25 IANYVLSNLDSIEKMTINQLAKATYTSVATINRFVKFLNLDGYKEL-VHIIKYFKNSLQG 83 Query: 81 PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN--SEEKLHECVTMLRSARRIILT 138 I + +++ T + ++ + ++ ++ A +I + Sbjct: 84 DQ------ITYSLTSNSLILNAYNNIISSLDETSKLTIEQQDTIKNLISKIKKALKIAVF 137 Query: 139 GIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLA 198 +G + +A++F KL++IGFN AV D H + +DL + +SY+G +L Sbjct: 138 AVGGTFNIAKDFQQKLLRIGFNITAVNDFHNGYLLANQLNNNDLAIFVSYSGETLDLIKL 197 Query: 199 ADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIA 258 A ++ ++ + T N L +++ + + E+ S ++ + DL++I Sbjct: 198 AQVCIKNNVQIAVVCKATNNTLSNLSNYLINISSNEKIDRLVSTTSRFSLLFALDLIYIF 257 Query: 259 LIQQDLELAPERIRHS 274 L+ DL+ E + + Sbjct: 258 LLSTDLKNYTELLEKT 273 >UniRef50_B5RKH7 Transcriptional regulator, RpiR family n=2 Tax=Proteobacteria RepID=B5RKH7_KLEP3 Length = 294 Score = 183 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 70/265 (26%), Positives = 116/265 (43%), Gaps = 3/265 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L I R LA S+ K+ D LL+ P ++ Q+A AGVS +V++ A+ +G+ GF Sbjct: 20 LGSIHARSGDLAASEAKVVDLLLVDPLFVGTSTAAQVATRAGVSPPTVIRAARAIGFTGF 79 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 LK+ ++ A + + + D L V E I+ A+ A L Sbjct: 80 TELKIEIARARGTAQFFAPPEV---LTADATLASVLETSIRAGVDALTALSGAIEISALD 136 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 E V ++RSAR++ G G S VA + ++L G +++D + + + P D++ Sbjct: 137 EAVDLIRSARQVFAFGAGPSATVAADAVFRLRTAGVITVSIQDYLSAMIAARLLGPGDVI 196 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + +S TG AD G ++AIT L A+ L A+ Sbjct: 197 IVVSSTGRTSSTLSIADAASSAGASLIAITNQYDTPLATLANVSLVVGGMPLPAQMAAAG 256 Query: 244 ACHAQGMLTDLLFIALIQQDLELAP 268 + AQ ++ D L AL +D E + Sbjct: 257 SRLAQLVVIDTLVAALTLRDKEQSR 281 >UniRef50_C6JLR3 Transcription regulator n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JLR3_FUSVA Length = 281 Score = 182 bits (464), Expect = 8e-45, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 109/280 (38%), Gaps = 8/280 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + I+++Y L +S K +AD++ LS ++++ G+S +++++F Q +KG Sbjct: 5 IINIIKEQYGELTKSFKVMADFIFENITQIPFLSIKEISEITGLSSATIIRFTQYFKFKG 64 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 +P + + + + + +P I + + +I +N + N N +E Sbjct: 65 YPEFQKNI-QEILKKEITPMKEFKESILQTGEEETLLDDVILQNIEILKKLPNENLKENF 123 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNA-AAVRDMHALLATVQASSPDD 181 + + ++ ++ +I + +S + F + L + N + + +D Sbjct: 124 KKALEIIENSGKIYIVSSRSSYSLGYYFYFMLKEFKENVEIIISGTEDYTHKLLYLKEND 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L IS+ A + K++ +T + + L + E+ Sbjct: 184 VLFTISFHAYTDFTYKIAQFFKKRNNKIICLTDTLTSPFALISDCALLSKNGEKTY---- 239 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + + L I L + + E E + + + ++ Sbjct: 240 --SFVGAMTILNALCIKLAKLNKENTLESLEKLKEIAMEM 277 >UniRef50_C3RJI4 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RJI4_9MOLU Length = 252 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 99/262 (37%), Gaps = 20/262 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + Q Y L ++D + Y+L +S +L+ +S++++ +F+QK+ + Sbjct: 1 MQLEELVNQYYDDLNENDLMIWKYILAHKKECCEISIDELSKRCNISRATISRFSQKISF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GF K+ L + +++ +M T + Sbjct: 61 EGFREFKMRLKLECQQVQVKN--------------DGMLDEICNNYLKSMELTKDS---- 102 Query: 121 KLHECVTMLRSARRIILTGIG-ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 L + + ARR+ + G G VA+ ++ + L T+ Sbjct: 103 DLDDLFEHIHHARRLFVFGTGETQNTVAEMIKRVFLQTKVFFVTLYGKSELKMTINGLGE 162 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE-QATN 238 D+++ IS +G A + G +++IT N L + A LY I ++ + N Sbjct: 163 QDVMIFISVSGENEMAIEAMKTLKNKGTYIVSITKLNNNTLARLADKSLYVITDQYKRFN 222 Query: 239 SASISACHAQGMLTDLLFIALI 260 + + A ++LF+ + Sbjct: 223 NRTYETTSAYFNTVEILFLKYL 244 >UniRef50_C5F607 Predicted protein n=1 Tax=Lactobacillus paracasei subsp. paracasei 8700:2 RepID=C5F607_LACPA Length = 269 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 102/279 (36%), Gaps = 19/279 (6%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I ++ +AD+ ++ +L+ VS+SS+ +F +K+G Sbjct: 10 DIFILIESCRLNFTSVEQVIADH---HLSKRPAMTIDKLSEHLAVSKSSITRFCKKIGLD 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + L +L ++ + S K+ + + + S+ Sbjct: 67 NYKELIFLYKLSLNNETANLSAS---------------SKITAAYHSLATRSDSNYSQAV 111 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + +L + + G G + +F +K ++G + D +++L + ++ D+ Sbjct: 112 IDAFCELLHQHKIVHFFGKGFNSYAGSDFQFKFSRVGKYIRVITDENSILMSANFANKDE 171 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++ S G EL A + +L IT + L A L + + + Sbjct: 172 LIVVASLRGDDEELLEAMKIAKKRRVPILLITSNRYSQLIPHADVTLLAASLTKEEALGN 231 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 IS + D+++ I A R SE ++ K Sbjct: 232 ISPQIPILIQLDIVYERYIHL-YADAIARWLTSEQILHK 269 >UniRef50_A9WLS8 Transcriptional regulator, RpiR family n=1 Tax=Renibacterium salmoninarum ATCC 33209 RepID=A9WLS8_RENSM Length = 214 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 2/206 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + L + ++A + A +L+ +LA +A S+ +V++ + LG+K Sbjct: 3 DFQALVSAHLNELTPAAYRVASVITDNLGEAVNLTISELAVKAKTSEPTVLRVCRVLGFK 62 Query: 62 GFPALKLALSEALAS--QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+P L+LAL+ + E + D L V K+ T + TL Sbjct: 63 GYPQLRLALASEIGRIAGAEEGLGLPETALHPHDSLADVVAKVRFNETRGIDQTLAAADL 122 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L+ T+L A +I L G+GA LVA++ +KL ++G AA + H L Sbjct: 123 DNLNTIATVLDGAEKIHLYGVGAGDLVAKDMYYKLFRVGRQAAVYTNPHDALMGAALMGK 182 Query: 180 DDLLLAISYTGVRRELNLAADEMLRV 205 D+ +A S++G + Sbjct: 183 RDVAMAFSHSGTTVLTLDFITTAQKA 208 >UniRef50_Q11C05 Transcriptional regulator, RpiR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11C05_MESSB Length = 307 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 51/281 (18%), Positives = 105/281 (37%), Gaps = 13/281 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + IR R + Q + +AD+++ + S +LA ++ S++V+FA+ LG+ Sbjct: 24 GLINLIRLRRMSMPQKLRAVADFIIERAHEVPIHSITELARMLDIAPSAIVRFAKLLGFS 83 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGD----DPLRLVGEKLIKENTAAMYATLNVN 117 GF ++ L + S R + V + N +A+ A Sbjct: 84 GFSEMQRLLRSQAITGQNSYVGLTSKLTRPGAGQVSTIGHVLDAFFDANISALQACRAEV 143 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLA-TVQA 176 +++ + V + SA I + G + +A + L +G LL Sbjct: 144 DVQEMEKIVEAMASANLIAVIGQKRAFPLASYLFYGLSMLGCKTVLFDGPGGLLQRQAAI 203 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT-IAEEQ 235 +D+L+ IS+ ++ A +V+AIT + L A+ L+ + Sbjct: 204 LDKNDVLITISFAKYAEDVIATARAAKEANVEVIAITDSKESPLADIATRALFVQDSNLN 263 Query: 236 ATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 S S+++ + LF+ L + + + + Sbjct: 264 GIRSISVTS-----TILQSLFVGLGIRI--ENKQALNKNRE 297 >UniRef50_UPI000196B851 hypothetical protein CATMIT_00169 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B851 Length = 283 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 94/256 (36%), Gaps = 5/256 (1%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L+ ++K + Y++ D ++SS++LA + +S+++ ++K GY F K + Sbjct: 22 KLSDAEKSICQYIIEHLDQVPYMSSRELARLTYSNPTSILRLSRKFGYANFNDFKFDIVL 81 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 L ++ +D K + + T N S + E + +L Sbjct: 82 KLRDMHMPKV-----ELNKNDSGLECINKTAQLYDNVIARTKNNISLAQYDEIIDVLNKC 136 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVR 192 I + + +A LM IG + + +++ ++ TG + Sbjct: 137 EAIDIIATDMNANIAHYAQHVLMPIGKQIHVYENQDLQVHASLNVPSTHVVILVTKTGFK 196 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLT 252 R + A + R G +AIT + + ++ + + E + + + Sbjct: 197 RHILDNARILCRRGITTIAITPDDKGPISKCVTYTIKAESNETFVKLRDVIFSISTKFIF 256 Query: 253 DLLFIALIQQDLELAP 268 DL F +L + E Sbjct: 257 DLFFTSLCAINYENTL 272 >UniRef50_B9DLT1 Truncated putative RpiR family transcriptional regulator (Fragment 1) n=1 Tax=Staphylococcus carnosus subsp. carnosus TM300 RepID=B9DLT1_STACT Length = 190 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 48/192 (25%), Positives = 97/192 (50%), Gaps = 4/192 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L ++ +Y L +S+KK+ADY+L +P +++ LA+ S SSVV+F K+ Sbjct: 3 NILYKLESKYPSLTKSEKKIADYILRRPQQIVDMTTHTLADRTSTSPSSVVRFGYKITDG 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK +S+ ++++ + + +++ ++ L + K++ T + + E Sbjct: 63 GFQELKTEVSKYMSARTKPRQL----ELQSNESLDTIKRKMLSRTTQTLCKVSDAVDEND 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + L+ +R + + G GAS + A++ KL ++G N + +H L+ + D Sbjct: 119 IDKVCARLKQSRTVFIFGFGASYVAARDLFQKLSRVGINVHCIEGVHTLINVIATHDARD 178 Query: 182 LLLAISYTGVRR 193 L IS +G + Sbjct: 179 CLFIISNSGRTQ 190 >UniRef50_B9K550 Transcriptional regulator n=1 Tax=Agrobacterium vitis S4 RepID=B9K550_AGRVS Length = 313 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 53/262 (20%), Positives = 99/262 (37%), Gaps = 10/262 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M RI L+ + +++ADY+L P + +++LA VS +V +FA+ LG+ Sbjct: 13 MPMSQRI--IQATLSPAHRQIADYVLDYPLRVAAMRAEELAEIVHVSVPTVNRFARALGF 70 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ + L +P + + + V + T + T E Sbjct: 71 AGYAQFRADLVLGY-ETALAPVEKLQRRSQAATSPADVFANNLAMITRNIERTHQALDTE 129 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATV---QAS 177 L + ++ SARRI + G+G+S + + + + + + Sbjct: 130 TLSRAIGLILSARRISIIGLGSSAWLGGLMQRRFDLFCDDVRLLATVEGASFAARALRNV 189 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 DL++AI++ + A M G VLA+T + L A+ L+ E Sbjct: 190 RAGDLVIAIAFPRYMADTVTLAKRMRDAGADVLALTDNASSPLVAHATMTLFAQVESDYF 249 Query: 238 NSASISACHAQGMLTDLLFIAL 259 S + L + L A+ Sbjct: 250 ASCE----ASALALIESLSAAV 267 >UniRef50_C5SGA6 Transcriptional regulator, RpiR family n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SGA6_9CAUL Length = 292 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 105/267 (39%), Gaps = 11/267 (4%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I ++Y ++ K++A ++L +P+ + +A A V S++V+FA+ LGY G + Sbjct: 29 IMRQYDDASRRMKQVASFVLDKPEDVAFETLAVVAERADVQPSTLVRFAKTLGYAGASQM 88 Query: 67 KLALSEALASQP------ESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + + + L S E ++ G++ L + ++ + + A+ S + Sbjct: 89 QKVIRDELLSSHISLAYGERARAFGASEAIGEEGLSTILDEFAEADILALNHLRQSVSAD 148 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASSP 179 ++ V + +A + + G + VA A+ L + G + + Sbjct: 149 QIRTSVEAIIAAENVYIAGFRRAFPVASYLAYALQRAGKRVVFLDGAGGLWEQQARGIRA 208 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +DLL+AIS+ E L G +VL+IT + L + L E Sbjct: 209 EDLLIAISFRPYAEETVRCHALALERGAQVLSITDSNVSPLVKPGHQSLLLRESEVR--- 265 Query: 240 ASISACHAQGMLTDLLFIALIQQDLEL 266 + + A L L +A + Sbjct: 266 -AFRSLTAPLCLAQSLVVAYAFANAPE 291 >UniRef50_C5B7U9 Transcriptional regulator, RpiR family protein n=1 Tax=Edwardsiella ictaluri 93-146 RepID=C5B7U9_EDWI9 Length = 225 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 97/204 (47%), Positives = 138/204 (67%), Gaps = 6/204 (2%) Query: 2 NGLLRIRQRYQGLAQS-----DKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQ 56 + ++ + L+ + ++KLAD++L P+ LSSQ+LAN G+SQSSVVKFA+ Sbjct: 15 DIYEQLGENKAALSFAGTKRDERKLADFILSSPEQLGKLSSQELANTLGISQSSVVKFAK 74 Query: 57 KLGYKGFPALKLAL-SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLN 115 KLG++GFPALK + + L Q + +H+ I DPL++VGEKL+ E AA+ +TL Sbjct: 75 KLGFRGFPALKQDISAHLLRHQAPANEAALHHGILRHDPLKVVGEKLMAEKIAALQSTLT 134 Query: 116 VNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQ 175 +N EE+L + ML ARRI++TG+GASGLVA++FA KLM+IG A A D H +A Q Sbjct: 135 INHEEQLQRALRMLLGARRIVITGLGASGLVARDFANKLMQIGLAAYAESDTHMQIACAQ 194 Query: 176 ASSPDDLLLAISYTGVRRELNLAA 199 A P DLL+AISY+G R+E+N+AA Sbjct: 195 AMQPQDLLMAISYSGERKEVNIAA 218 >UniRef50_B5E566 Transcriptional regulator, RpiR family n=10 Tax=Streptococcus pneumoniae RepID=B5E566_STRP4 Length = 269 Score = 180 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 100/259 (38%), Gaps = 13/259 (5%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + I +A ++K +A + L Q SS+ L VS++++ +FA+K G+KG Sbjct: 7 LIPMIEANLPNMAYAEKDIAKFFLKQ-QPLNDYSSKALCEYLNVSKATLTRFAKKCGFKG 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F E + + + EK++ + + T V E +L Sbjct: 66 FRQFIFKYQEMIHEKEKLAL------------YTEATEKVLSDYEEMLRKTYTVLDEVQL 113 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 M+ +A R+ L G G+S L Q + M++G + D +L + + + L Sbjct: 114 ERIAEMIETAERVYLYGKGSSVLALQEMKMRFMRLGVIGEVLSDEDMILWSSLLLNENCL 173 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ S +G + + G K + +T + L + + + I Sbjct: 174 VIGASISGQTDIVLEGLQKAADKGAKTVLMTTRKFDEEDCFFDELLLLASTDHLSYGNRI 233 Query: 243 SACHAQGMLTDLLFIALIQ 261 S ++TD LF ++ Sbjct: 234 SPQFPILLITDCLFSNYLE 252 >UniRef50_A4WSY4 Transcriptional regulator, RpiR family n=19 Tax=Alphaproteobacteria RepID=A4WSY4_RHOS5 Length = 299 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 58/280 (20%), Positives = 103/280 (36%), Gaps = 7/280 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +R L +++++LA ++L Q A S LA A VS +VV+ QKLG+KG Sbjct: 17 IEELMRSALPDLTRAERQLATHILRQYPVAALGSITALAKAADVSTPTVVRLVQKLGFKG 76 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 +P + L + + SP H + G P + + A + ATL + Sbjct: 77 YPDFQAGLRGEVEAMLMSPLAK-HERWAGGVPDTHILNRFADAVVANLEATLGQIDHAEF 135 Query: 123 HECVTMLRS-ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASSPD 180 +L RR+ + G + +A F + + D + Sbjct: 136 DAAARLLADPGRRVFVLGGRITHALADYFVTMMKVTRPEVMLMSDMSSTWPPALLDMGKG 195 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+LL + A+ + G +V+ +T + A H E + Sbjct: 196 DILLLFDIRRYENTVLQVAEMAVEQGVEVVLMTDRWISPAAVHARHTFSCQIEVP----S 251 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + A +L + L A+ E ER++ E L + Sbjct: 252 AWDSTVAMLVLLETLISAVQSLTWEQTEERMKRLEELYAR 291 >UniRef50_C9NY46 Predicted transcriptional regulator of the myo-inositol catabolism operon n=2 Tax=Vibrio RepID=C9NY46_9VIBR Length = 281 Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 53/265 (20%), Positives = 105/265 (39%), Gaps = 9/265 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R+ +RY L+Q +++AD+++ QP + +A +A V S++ +FA +G+ G Sbjct: 18 LRDRVVKRYDRLSQRLQQVADFVMAQPMLVAVETMATIAEQANVPLSTLSRFANTMGFSG 77 Query: 63 FPALKLALSEALASQPESPSVPI----HNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 F ++ E ++P + + D V + N A+ S Sbjct: 78 FSQMQALFREQYLNRPRDYKERVRQAREHDDMASDSPAAVFQDFGHANVEAIEQLQIAVS 137 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL-ATVQAS 177 +KL + V++L A I + G+ + VA + LMK N + D +L + Sbjct: 138 PQKLEKAVSLLDEAETIYIQGMRRAYPVAFYLWYALMKSDNNVVLIDDHGGMLKPLTKRM 197 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 + D+LL +++T E + + ++AIT + C E Sbjct: 198 NKKDVLLCVTFTPYAPETSELVENAHEKQVPIVAITDNQMTENGSKYDVCFEVKEGEVM- 256 Query: 238 NSASISACHAQGMLTDLLFIALIQQ 262 + + L L ++L+ + Sbjct: 257 ---GFRSLSSSMYLAQTLAVSLMCR 278 >UniRef50_C0D8Y2 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D8Y2_9CLOT Length = 278 Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 112/279 (40%), Gaps = 11/279 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M ++++ L+ KK+A Y+L + +L+ +++ EA VS+++V++FA +G+ Sbjct: 1 MQFEALVKEKIAELSAGQKKVAQYILGHLEETSYLTLTKISREANVSETTVIRFAYSIGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + F A++ AL + + + G+ + ++ + + T S + Sbjct: 61 ESFSAMQGALQQEILGNNSVKA-------EGNAHESAYYDHVLNREISILEKTKKGLSRD 113 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSP 179 K+ E V L A + G A F L + V + + V + Sbjct: 114 KVDEAVERLYRADMVFSVGSRTGFPAALWFGIALGRFRDGVFPVNPVGEDFFSNVMKVTE 173 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +++AIS + + G ++ +T + A T + T Sbjct: 174 HSVVVAISMARYSKATYRFIQQAKARGASIILVTDSQISPPALLADLVFLTESNRDETGI 233 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +IS+ A L +++ + L ++D A ER++ E L Sbjct: 234 NTISSISA---LLNIMAVGLRRRDPRQAMERLKVLETLY 269 >UniRef50_C9M9F8 Transcriptional regulator, RpiR family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M9F8_9BACT Length = 289 Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats. Identities = 49/270 (18%), Positives = 108/270 (40%), Gaps = 8/270 (2%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 +R R + +++ ++LL A L+ +A E VS++ +V+ A+ LG+ G+ Sbjct: 8 EVLRARLENSPPKARRVVEFLLSHMREAAFLTIGDVAGELNVSKAQLVRVARMLGFGGYS 67 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 LK A+ E + Q P+ ++ + ++ + ++ + A + T N + + Sbjct: 68 ELKAAIQETVLEQVN-PAAMLNRALSENESA--LAARIHQMEHANLEDTWNRLDPANIKK 124 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSPDDLL 183 ML +A I G G S + ++ +L ++G + ++ L+ V+ D+L Sbjct: 125 FSAMLLAADSIFCAGWGISAMTSECLFSRLRELGLKSFTLQPGCLTLIEQVRCLDSRDVL 184 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 +A L + + G K++ +T + + A + S Sbjct: 185 IAFDLPSYALLLTESVARAKQAGAKIITVTDSPAAPICKMADLSFFVSDSSPTFG----S 240 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRH 273 + L +L AL + + A + + Sbjct: 241 SLIGAVFLIHVLTSALSVEMGDRARKALEE 270 >UniRef50_P54717 HTH-type transcriptional regulator glvR n=4 Tax=Bacillus subtilis group RepID=GLVR_BACSU Length = 254 Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats. Identities = 60/272 (22%), Positives = 108/272 (39%), Gaps = 23/272 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I Q Y L +D + Y+L T HL LA VS+SS+++ AQKLG+ Sbjct: 1 MQLEELINQHYSKLNDNDFHILKYILNHKHTCYHLGIDALAKACSVSRSSILRLAQKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ ++ L + ++ + EKL+ + + A L + Sbjct: 61 SGYSEFRVFLKWE---------------DQPEEGESMSFEKLLDD----IEANLKFLRTK 101 Query: 121 KLHECVTMLRSARRIILTGIGASGLV-AQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + + ++ +A RI + G G + + A++ + + D + Sbjct: 102 DMTDMCQLIDAADRIFVYGSGNAQKICARDLQRMFIPRHRYLILIEDTNEFNLMRDDFKV 161 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +DL + IS +G EL A + G ++IT N L Q H LY ++ + Sbjct: 162 NDLFIIISLSGETPELIPQARMLSAKGIPFISITNLKNNVLAQLTPHNLYATSKPVTLSD 221 Query: 240 AS-ISACHAQGMLTDLLFIALIQQDLELAPER 270 + I A ++ + LF A + D + A + Sbjct: 222 RTEIVAFAPFFLVGEALFRAYV--DYKEAEKN 251 >UniRef50_B9R568 SIS domain protein n=2 Tax=Labrenzia RepID=B9R568_9RHOB Length = 289 Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats. Identities = 60/277 (21%), Positives = 110/277 (39%), Gaps = 11/277 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L IR R ++KK A L+ + + A AGVS ++++F +LG+ G Sbjct: 5 LLDDIRDRLDEFTATEKKAAHALMANYPVQGLGTVAEFAKAAGVSAPTILRFVARLGFPG 64 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F + L LA+Q SP + + VG+ + T + + +L Sbjct: 65 FAEFQKKLRSELANQLNSPLARSTSLAKDTTGDPHVGQ-----LIENIRETFDHLPKGEL 119 Query: 123 HECVTMLRSARR-IILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSPD 180 V +L R+ + L G + +A+ A L + N V H L + P Sbjct: 120 DGLVKLLADDRKTVHLIGGRFTDGLARYMAAHLRIVRPNVVHVAGQHGNWLDQLLGIGPK 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D++L + E+ A+ + G V +T + + + AS+ L + Sbjct: 180 DVVLVFDIRRYQAEIIQFAEAAAKQGATVALVTDSWMSPIGRIASYVLPARVAVP----S 235 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + A + ++L + +++ + A ER+R EAL Sbjct: 236 PWDSSLALMAIAEVLIAGVTRENQDKAEERMRALEAL 272 >UniRef50_Q6LK40 Putative transcriptional regulator n=3 Tax=Vibrionaceae RepID=Q6LK40_PHOPR Length = 280 Score = 179 bits (456), Expect = 7e-44, Method: Composition-based stats. Identities = 55/265 (20%), Positives = 104/265 (39%), Gaps = 9/265 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 I +RY L+Q +++ADY++ QP + +A +A V S++ +FA +G+ G Sbjct: 17 LRDLIVKRYDKLSQRLQQVADYIMAQPMLVAVETMATIAEQANVPLSTLSRFANTMGFSG 76 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGD----DPLRLVGEKLIKENTAAMYATLNVNS 118 F ++ + ++P + D + + + N AM S Sbjct: 77 FSQMQALFRDQYLNRPRDYKERVRQARDQDCFEPESPTSIFQDYGAANIEAMEQLQVSVS 136 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL-ATVQAS 177 +KL V++L A I + G+ + VA + LMK N + D +L + Sbjct: 137 PQKLERAVSLLDKADTIYIQGMRRAYPVAFYLWYALMKSDNNVVLLDDHGGMLAPMTRRI 196 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 S D+L+ I++T E + ++AIT N+ + C E Sbjct: 197 SDKDVLVTITFTPYAPETSELIKLASEKNVPIIAITDNQMNSQGSKMDVCFEVQEGEVM- 255 Query: 238 NSASISACHAQGMLTDLLFIALIQQ 262 + + L L ++L+ + Sbjct: 256 ---GFRSLSSSMYLAQTLAVSLMCR 277 >UniRef50_D1Y5K3 SIS domain protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y5K3_9BACT Length = 284 Score = 179 bits (456), Expect = 7e-44, Method: Composition-based stats. Identities = 45/277 (16%), Positives = 105/277 (37%), Gaps = 8/277 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L +I++R + + +K+A Y++ + +A AGVS +SV+KF ++ Y Sbjct: 3 NFLEKIQKRQSAFSPAVRKVATYIMEHYSDIPFCTITDVATAAGVSVTSVIKFCTEMQYS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNV-NSEE 120 F K A+ + + Q I++ + + V +++ + + ++ T+N ++E Sbjct: 63 AFSEFKQAMRDHIQ-QTLISHYNINDDNFTEAHQQSVLDEVTRLDIENIHRTMNNPINQE 121 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSP 179 + + + A I G S + A + L G + + + + Sbjct: 122 NIKKFFHLAEKAHIIYTMGFRTSAIFATYTSLLLRMQGLTVFPITPGIGDYIDKMLTVHS 181 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DDL++A S+ +++ + ++ +T + A Q Sbjct: 182 DDLVMAFSFNRYSKDVVKMLKTLHDRKIPIVLVTDDKLSPSYVYADLVFTCSTRTQNY-- 239 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 +++ L + +F A + + + E Sbjct: 240 --VASYVGCMSLLNSIF-AYGISHYKNYVKSLSQLEQ 273 >UniRef50_C2HQZ9 Transcriptional regulator n=2 Tax=Lactobacillus acidophilus RepID=C2HQZ9_LACAC Length = 277 Score = 179 bits (456), Expect = 7e-44, Method: Composition-based stats. Identities = 66/269 (24%), Positives = 109/269 (40%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 Q L S+K++A YLL Q LS+Q+L S+ +V++F +KLGYK F Sbjct: 7 QNETNLTNSEKEIARYLLNQNLDLATLSAQKLGELTFTSKPTVLRFIKKLGYKKFNEFCY 66 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L +S + H I D L + K+ A+ T ++ +E L+ V Sbjct: 67 DLISEQERIKKSRDLLKHININKDSNLSDLLIKVPNLYNQAINRTNSLMDQENLNLIVKK 126 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 L + I G G + +AQ ++K IG +++ T + IS+ Sbjct: 127 LNTLDYIDFYGSGITEGLAQIGSFKFSSIGKFGGVYSNVNEHYLTSIHGINKHGAIIISF 186 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 TG + + AA ++ ++ L I G L+ S L E + SI A Sbjct: 187 TGGNKAMINAAKDLKKLNIYSLGIGGLENEELKNNCSSYLTIPFENLSLGMESIVPSVAI 246 Query: 249 GMLTDLLFIALIQQDLELAPERIRHSEAL 277 + D+LF +L ++L + L Sbjct: 247 NYVIDILFTSLTIKNLSQNVTNALKVKNL 275 >UniRef50_UPI000196B86F hypothetical protein CATMIT_00765 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B86F Length = 281 Score = 179 bits (456), Expect = 8e-44, Method: Composition-based stats. Identities = 49/255 (19%), Positives = 96/255 (37%), Gaps = 2/255 (0%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 + +++K++ DYL+ D LS LA + S +++++ +K GY G+ ALK+ Sbjct: 25 SQENKYTETEKEVIDYLMNHLDLLEELSINDLAKKTYTSNATIIRLCRKTGYSGYKALKV 84 Query: 69 ALSEA-LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 L + A++ SV + ++ + + + ++ + + L Sbjct: 85 DLIKEREANKYIVESVDYTTPFQFNETTEEIMKNMFSLYQESIKQVYSSLDIDVLKSIAH 144 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAIS 187 + +RI L G + NF KL+K+ + + DD L IS Sbjct: 145 EIIHKKRIFLFSYGDTQTTVINFTNKLVKVNIFPTLATQFGEERHISKRMNKDDYALIIS 204 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHA 247 Y G L + R K+ IT N+L + E+ ++ + A Sbjct: 205 YRGQ-ERLLECVQTLSRNHVKIGLITANKKNSLMAYCDDLIMIPDCEKENRISTFYSQLA 263 Query: 248 QGMLTDLLFIALIQQ 262 + L+ + Q Sbjct: 264 FQYVLSNLYAIIYHQ 278 >UniRef50_B4BR41 Transcriptional regulator, RpiR family n=3 Tax=Bacillales RepID=B4BR41_9BACI Length = 248 Score = 179 bits (455), Expect = 9e-44, Method: Composition-based stats. Identities = 54/264 (20%), Positives = 111/264 (42%), Gaps = 19/264 (7%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L R L ++K + Y+ + A+ LS +A + VS +++++ KLG + Sbjct: 3 KLLDRFSNYIGQLTHAEKHVLYYIDGHVEQAKQLSLTAMAEKNNVSTTTIIRMCHKLGLE 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF L+ L DD VGE I+ A M TL+ + Sbjct: 63 GFSELRYILK------------------TIDDQAIPVGENTIERYKADMNQTLDSLERKH 104 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + E ++ A R+++ +G S ++ + F+ L+++ ++ V + H + P D Sbjct: 105 VEEISQLIFEANRVLVVAVGLSKMIGEYFSKLLIQVNKPSSYVYESHIIDLLPNMVQPKD 164 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++ IS +G + + AA+++ + +AIT + L + + + Sbjct: 165 MVIFISSSGETKTIVQAAEKLRFKNIETVAITNSADSTLAKLVRKHISAYVQRVQFAGYD 224 Query: 242 ISACHAQGMLTDLLFIALIQQDLE 265 +SA +L D+LF ++ + Sbjct: 225 LSARSTLVVLIDILF-EFFMKNYK 247 >UniRef50_Q6M5C3 Transcriptional regulator, rpiR family n=3 Tax=Corynebacterium glutamicum RepID=Q6M5C3_CORGL Length = 293 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 59/258 (22%), Positives = 116/258 (44%), Gaps = 3/258 (1%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 RI L + +K+A+ +L+ + L++Q LA+ GV +++V++ AQ LGY GFP Sbjct: 16 RITTLAPSLQPNQRKVAEVMLVDAPSIVELTAQGLADRVGVGRATVIRTAQSLGYDGFPQ 75 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 L++AL++ LA + + + L + I + A++ + +E+ L C Sbjct: 76 LRVALAQELALAQGASRSMVEGALSS--SLLGHLQAGISDFQASLGTVASALTEDDLTRC 133 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 + L SARR+++ G S + +F+ +L +G +A D + + + A Sbjct: 134 IEGLDSARRVLVASHGLSAPLGLDFSQRLNSMGRSAEVHSDSMSEQIVARQLGEGSVCFA 193 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI-SA 244 IS +G + + G ++A+T F +A+ A L + ++ Sbjct: 194 ISGSGASKATLATIEAARAGGATIMAMTCFAHSAIDVAADVSLIVPPMTASFQDELTRTS 253 Query: 245 CHAQGMLTDLLFIALIQQ 262 A ++++ L LI Sbjct: 254 RAALMLVSEQLIELLITH 271 >UniRef50_C2H000 RpiR family transcriptional regulator n=26 Tax=Enterococcus RepID=C2H000_ENTFA Length = 253 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 96/252 (38%), Gaps = 22/252 (8%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 ++ Q L + + + Y+L + +QLA VS S++++F K+GY GF LK Sbjct: 5 EKVQTLNELEMLVYHYVLEHLHQIPQQTIRQLATSCHVSTSTILRFCNKMGYAGFSELKY 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 A+ E + + +KL T E L + M Sbjct: 65 AVKEEAKQTQTFENFY-----DATVHVDAFLKKLN-------QETY----YEMLRPAIQM 108 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + AR + TGIG SG++ + + N+ ++ D + + L L +S Sbjct: 109 IVQARHVAFTGIGTSGILGSYGSRYFANLNINSYSIADPFTPIPKRGF--ENTLALILSV 166 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA----TNSASISA 244 +G E+ + G KVL+IT + + + A + + ++ S + + Sbjct: 167 SGETNEMIKQMTDFKTAGAKVLSITNNQHSTIARLADYNISYYMPDERSPFADKSVNTTT 226 Query: 245 CHAQGMLTDLLF 256 L +LL Sbjct: 227 QIPVIALIELLA 238 >UniRef50_B0NHF5 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0NHF5_EUBSP Length = 280 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 52/276 (18%), Positives = 107/276 (38%), Gaps = 10/276 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L RIR Y L + K +ADYL+ P+ +++ QL+ + S+ ++++F +K+G Sbjct: 1 MDILQRIRDMYPALTKKQKGIADYLMENPEDVCYITLAQLSQQTASSELTLLRFCEKIGC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIR----GDDPLRLVGEKLIKENTAAMYATLNV 116 F LK E S P + + + ++ AA+ Sbjct: 61 SSFLELKNEFREYTQHMIRLLSAPAYFPPENASCERSAKEALLTDICRQEAAAVADFSAS 120 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAV--RDMHALLATV 174 + E + ++ +RRI + S ++ A +L + FNA + D+ + Sbjct: 121 FNPESIVAAAGKIKKSRRIFIFAHDISKILGDFLAARLRLLYFNATLIDLDDLAETQNRL 180 Query: 175 QASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE 234 Q DL++ S+ + A + G +L IT + + ++H L Sbjct: 181 QQLCEGDLVIFFSFPKYYYPMGSIARKAADTGVPILTITDSISSPAAEHSTHLLLCQTST 240 Query: 235 QATNSASISACHAQGMLTDLLFIALIQQDLELAPER 270 + ++ + +LL L+ + + + Sbjct: 241 KMF----YNSLTLPMTILNLLASCLVIDMVPESERK 272 >UniRef50_C6VJY7 Transcription regulator n=3 Tax=Lactobacillus plantarum RepID=C6VJY7_LACPJ Length = 243 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 51/252 (20%), Positives = 99/252 (39%), Gaps = 18/252 (7%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 + Q L + + ++ Y++ P ++ +QLA+ + VS +++++F + +GY G+ K Sbjct: 5 DQVQQLKRLEIEIYKYIVGHPAEVSTMTIRQLADHSHVSATTILRFLKHMGYDGYAEFKF 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L E L P +R +++ + A KLH + Sbjct: 65 TLKEQLRQDATQPLAQTVVP------MRTFFDRMNLPDITA-----------KLHRVAEL 107 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + AR ++L G G S +A + G + + D Q D + A+S Sbjct: 108 VHQARMVVLIGSGTSAGLAAYGSHLFANFGLYSLMISDTSQPHPVQQQDLSDTVFFALSV 167 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE-QATNSASISACHA 247 +G ++ + + G KV+AIT + + L A L E QA + S + Sbjct: 168 SGESEDIIEQSVYYRQSGAKVVAITASSHSTLAGIADVVLTYDTPEVQAISGGSTLSQLP 227 Query: 248 QGMLTDLLFIAL 259 + L + + Sbjct: 228 VVYYLEQLAMII 239 >UniRef50_A6BJ02 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A6BJ02_9FIRM Length = 300 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 49/276 (17%), Positives = 106/276 (38%), Gaps = 12/276 (4%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L ++ K +A+Y+L A ++S ++A + GVS+SSV++F++ +G+ GF + AL + Sbjct: 27 HLTKTQKIIAEYVLDNASEACFMTSTEIALKLGVSESSVIRFSRTIGFDGFMDFQKALRK 86 Query: 73 ALASQPESPSVPIHNQIR------GDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 + S S I + D + K + NS E + Sbjct: 87 DYQDKVLSISSSITVPSQRIAKQAKLDTSSDYINRHFKNAAHNLEEIFIQNSIETFEQAA 146 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHAL-LATVQASSPDDLLLA 185 ++ S++ + + +A F L ++ + + + S D L+ Sbjct: 147 DLIVSSKHKYIAATRGNICLADFFLLYLKQMVPHVTMTTTTSMSPIDHMCNISHTDCLVL 206 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 S+ + + A+ G ++ IT + L + A L + ++ Sbjct: 207 FSFPRYSSQDEVTAEMAHDAGASIIVITDKPSSLLAKYADILLTVPVDSNTF----FNSM 262 Query: 246 HAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +T+ L + +I + +R+ + + KL Sbjct: 263 IGPQFVTEAL-LEIISHRAKGIEKRLNIIDKYLNKL 297 >UniRef50_A9BZX9 Transcriptional regulator, RpiR family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BZX9_DELAS Length = 325 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 59/283 (20%), Positives = 110/283 (38%), Gaps = 11/283 (3%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 +R G + + ++ ++ P A LS++++AN G S ++V +FA+ GY+GF Sbjct: 21 ELLRASVDG-SPAVARVGRWMAAHPVLAVTLSAEEVANACGGSLAAVNRFAKHAGYEGFA 79 Query: 65 ALKLALSEALASQPESPSVP---IHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 L+L L L E + + + +GE+ + + A Sbjct: 80 DLRLHLGRQLQQALEPVNKLRAAHGPEAATAGAVGTMGEQAFRHTQRNLQAAAQACDPGL 139 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR---DMHALLATVQASS 178 L + + ARR++ G G+S VA A L V + + + Sbjct: 140 LDQLAQRICRARRVLFMGFGSSHHVAAFGADVLQPYLPQVVEVTSAGGSEQAVRRMTGLT 199 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D+L+AIS RE + G +AIT + + L + A + L A Sbjct: 200 EQDVLIAISLPRYSREAVALTAHARQRGALTIAITDESTSPLAREADYTLLAPASHPLLP 259 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+ + A + + L +I+ + + SE+++ L Sbjct: 260 SSPM----AAMAMVEALATQVIRATPQAVRSLVELSESVLPYL 298 >UniRef50_D1P280 Transcriptional regulator n=5 Tax=Enterobacteriaceae RepID=D1P280_9ENTR Length = 250 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 55/251 (21%), Positives = 109/251 (43%), Gaps = 14/251 (5%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 + Y L S+KK+ YL +L+ +L + VS++ ++ +QKLG+ GF LK Sbjct: 6 KNYDNLTVSEKKVLKYLTDNIADIPYLNINELVAKTFVSKTVIINLSQKLGFSGFKELKF 65 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 ++ + SQ ++ + K+ ++ T + +EE++H+C Sbjct: 66 QINNHILSQNKAEKKNPAS--------------YKKQLENNIHKTFTLINEEQIHDCAKT 111 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 LR +R I + G S V L +G + + D + + + + DD ++ IS Sbjct: 112 LRHSRNIFIVARGTSKAVGYYLEHLLFSLGLHCFFINDYNLSDSFTRLVNKDDTVIFISL 171 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 +G +++ A + ++++T F N L +++ L+ A+ T + Sbjct: 172 SGGTKKIIETAKIVQLKDANIISMTAFHTNELTAYSTNSLFCFADSYDTKRDDSKSRTGF 231 Query: 249 GMLTDLLFIAL 259 +L DLL L Sbjct: 232 FILVDLLINEL 242 >UniRef50_D1Y461 Transcriptional regulator, RpiR family protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y461_9BACT Length = 290 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 53/278 (19%), Positives = 106/278 (38%), Gaps = 11/278 (3%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 +R + +++ +YLL A +S +A + VS++ +V+ A+ LG+KG+ Sbjct: 8 ELLRSNLDSMPSKARRVVEYLLTHMREAAFVSIGDVAEQLNVSKAQLVRVARILGFKGYA 67 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 LK AL EA+ Q ++ D + E++ + A + T N E + Sbjct: 68 DLKGALKEAVLEQVNPAAMLARAMSEEGD----LSERIRQMEHANLEDTWNRLRVEDVRS 123 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAA-AVRDMH--ALLATVQASSPDD 181 ++++A I G SG++A+ +L ++G A L+ ++ D Sbjct: 124 FCELVKAAEGIYCAGWSISGMMAECLHSRLRELGLRAHQMYPGSGCLTLIEQARSVRKSD 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++A L A R G K++ +T + A + Sbjct: 184 LIIAFDLPSYSVLLTEALQRGRRNGAKIVTVTDSPAAPICGDADLSFFVSDNSPTFG--- 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S+ L +L L + A + + +++ Sbjct: 241 -SSLIGPLFLIHILTSRLSIDMGDAAMKALAEQSKILR 277 >UniRef50_UPI0001C316A3 transcriptional regulator, RpiR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C316A3 Length = 280 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 74/257 (28%), Positives = 109/257 (42%), Gaps = 7/257 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +R R L SD+K+A+ +L QP S ++LA+ AG ++SSVV+F Q G +G Sbjct: 7 LLPHLRTRLPLLGGSDRKIAEVVLRQPQDVVFWSVRELADAAGTAKSSVVRFCQGSGLRG 66 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LKL L++ A ES DP V +++ + Sbjct: 67 FHDLKLILAQETALARES-------DPLAHDPAGDVLGAVVRAGAETLRDAAATVQRSAF 119 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 +L A +++ G G SG +AQ+ A +L IG AAA D S D Sbjct: 120 DATAGLLARADAVLVVGGGGSGPLAQDAAQRLRVIGVRAAAPADAPGQHVAAALLSRGDA 179 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 LAIS+ G A G AIT F + L A H L A + A++ Sbjct: 180 CLAISHRGATAGTLEAVAAAADAGAATAAITSFAGSPLTGLADHVLVAGARAASPRLAAL 239 Query: 243 SACHAQGMLTDLLFIAL 259 ++ A + D L +A+ Sbjct: 240 TSRLAHVAVLDALLVAV 256 >UniRef50_C2JTN9 Transcriptional regulator n=3 Tax=Lactobacillus rhamnosus RepID=C2JTN9_LACRH Length = 268 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 19/279 (6%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I ++ +ADY ++ + + VS++S+ +F +K+G Sbjct: 9 DIFILIESCRLNFTAVEQVIADY---HLSKQPAMTIDKSSAHLAVSKASITRFCKKIGLS 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + L +L + S V K+ + + + S+ Sbjct: 66 NYKELVFLYKLSLNQETTDLS---------------VSSKITAAYHSLATRSDSHYSQAV 110 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + L R I G G + +F +K ++G + D +++L + ++ D+ Sbjct: 111 IDAFCERLHQHRIIHFFGKGFNSYAGADFQFKFSRVGKYVRVITDENSILMSANFANQDE 170 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++ S G EL A + +L IT + L A L + + + Sbjct: 171 LIMVASLRGDDEELLKAMKIAKQRQVPILLITSNRYSQLVTHADVTLIAASLTKEEALGN 230 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 IS + D+++ I + + + SE ++ K Sbjct: 231 ISPQIPILIQLDMVYERYIHLYADAVSQWL-ASEQILHK 268 >UniRef50_D1B967 Transcriptional regulator, RpiR family n=2 Tax=Synergistaceae RepID=D1B967_THEAS Length = 288 Score = 177 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 54/276 (19%), Positives = 105/276 (38%), Gaps = 9/276 (3%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 + R + +++ +YLL A S +A + VS++ +V+ A+ LG++G+ Sbjct: 8 ALMMDRIDSMPNKARRVVEYLLSNMREAAFRSIGDVAEDLKVSKAQLVRVARMLGFEGYS 67 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 LK AL A+ Q P+ + +D L K+ N + T S Sbjct: 68 ELKDALQRAILEQVN-PAAMLAKVSNSEDSLPDTIYKMEHAN---LDDTWTQMSAASSAS 123 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSPDDLL 183 M+ A I G G S +VA++ +L + N+ ++ L V+ + DLL Sbjct: 124 FCQMVTEANNIYCLGWGISSMVAESLQVRLRVMNLNSFLLKRGTLTLHEQVRVAREGDLL 183 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + E+ + + G ++++IT + + A L+ A S Sbjct: 184 VVCELPSYVVEVTESVEIAHSNGCRIISITDSPAAPVCRFADLSLFVSASSPTFG----S 239 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + L +L L + + A + + + Sbjct: 240 SIIGPLFLVHVLTSILAIRMGDRAKKALEEQARFLH 275 >UniRef50_D2BNU3 Transcriptional regulator, RpiR family n=4 Tax=Lactococcus lactis RepID=D2BNU3_LACLK Length = 248 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 100/251 (39%), Gaps = 21/251 (8%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 ++ L + + + D+++ P+ + ++ + LA++A VS S++V+ KLG++G+ LK Sbjct: 6 EQISKLNELETLVFDFIIKSPEEVQQMTIRDLASQAHVSTSTIVRLCTKLGFEGWSDLKF 65 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L L + + +++ N + N + KL+ M Sbjct: 66 YLKNQLKEKTPEEQH---------------YDNMLEFNM-FLRRMNTDNYQAKLNNAAQM 109 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + A + G+G SG +++ + G + + D VQ + + + +S Sbjct: 110 IAKADYTVFLGLGTSGSLSEYATKYFVNTGLRSFVISDP-FQAVQVQGMG-NVVAVIMSV 167 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL---YTIAEEQATNSASISAC 245 +G ++ E G K+++IT + + A + L + +++ Sbjct: 168 SGETEQVVNKELEFKAGGAKIISITNNEDCTVAKLADYQLSYNLVNEWSKQYPLGNLTTQ 227 Query: 246 HAQGMLTDLLF 256 + ++L Sbjct: 228 LPVLAILEILA 238 >UniRef50_A1BAR1 Transcriptional regulator, RpiR family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1BAR1_PARDP Length = 294 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 61/280 (21%), Positives = 112/280 (40%), Gaps = 7/280 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R+ QR+ L +++ LA +L A S LA EAGVS +V++ QKLG++G Sbjct: 11 IEDRLMQRFGTLTPTERLLAGHLTRNFPVAGLASMTYLAKEAGVSTPTVLRLVQKLGFRG 70 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 +P + L + ++ ESP + H + P + + A + TL+ Sbjct: 71 YPEFQAQLRNEIEARLESP-LSKHARWTDGVPQTHILNRFADAVLANLTRTLSRIDHADF 129 Query: 123 HECVTMLRS-ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA-SSPD 180 C ML RR+++TG + +A +L + +A+ + + P Sbjct: 130 DACAEMLADPKRRVLVTGGRITHALADYLVTQLGIVRPGVSALPSQSSTWPSALLEMRPG 189 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L+ A+ G V+ IT + + A E + Sbjct: 190 DVLIVFDIRRYESATLQLAEMAAERGADVVLITDPWISPISAHARFRFAAQIEVP----S 245 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + A +L + L A+ + + A +R+ EAL ++ Sbjct: 246 AWDSSTALMVLIETLLAAVQELNWPQAQDRMTRLEALYER 285 >UniRef50_C2CZ55 RpiR family transcriptional regulator n=3 Tax=Lactobacillus RepID=C2CZ55_LACBR Length = 263 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 42/271 (15%), Positives = 99/271 (36%), Gaps = 12/271 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN I+ + L +++ L DY++ ++ S +++A VS ++ ++F +K+G+ Sbjct: 1 MNFFEIIKPYVEKLTKNEYTLLDYVIKHMAEIQNKSIREVAAACFVSTTTFLRFVRKIGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ + + + + + + + E + T+ V E Sbjct: 61 SGYSEFSTVIKYTVLNSDKKADSDVTFVEKQS--------QYRNEYLKNIEETVRVLDER 112 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 KL + + ++ G S + F ++ + + Sbjct: 113 KLLKICQQMDKHPKLYFYAKGFSKYTTDYIEYLYTLNDFIVIFPKNYEQRKLAYRNIDQN 172 Query: 181 DLLLAISYTGVRRELNLAADEMLRVG--GKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D++ Y G EL + +++ITG N +Q + LY +E N Sbjct: 173 DIIFVFDYEGEDDELIQLIQNLKSNTQFASLVSITGANNNTIQNMSDENLYLFTDELKIN 232 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPE 269 S +++ + ++ +LL ++ + E Sbjct: 233 SVDMTSHVSLIVIMELLLYQYLE--YKKNKE 261 >UniRef50_A6M2I1 Transcriptional regulator, RpiR family n=3 Tax=Clostridiales RepID=A6M2I1_CLOB8 Length = 263 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 48/276 (17%), Positives = 111/276 (40%), Gaps = 22/276 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I + ++ L ++D + +Y+ L+ QLA++ VS++++++F+QKL Sbjct: 1 MKLDELINKYHKHLNENDLYIWNYISKHRKECETLAIDQLAHKCNVSRTTILRFSQKLSL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG+ LK+ L E+ + ++ A + E+ Sbjct: 61 KGYGELKVYLKLDNEKSKENVNN-------------------VEAVCDAYNEVIKNIKEK 101 Query: 121 KLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + ++ +R + + GIG + + F + G + A V ++ Sbjct: 102 DCTDIFELIDKSRTLYVYGIGMVQSSIKKEFKRTFLTAGKIFYDLSGYTEANAIVDLATD 161 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE--EQAT 237 +D+ + IS +G + + A + +++IT N+L + + + LYT Sbjct: 162 EDVFVIISVSGENQFIMDFAKNLKIKNIPIISITKLKDNSLAKLSDYNLYTSTALIPSIY 221 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRH 273 N + + +L ++LF+ ++ + + +H Sbjct: 222 NDIDFESLTSYFILIEILFLKYMEYKTQKNKKEEKH 257 >UniRef50_B1QZ16 Transcriptional regulator, RpiR family n=2 Tax=Clostridium butyricum RepID=B1QZ16_CLOBU Length = 246 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 39/255 (15%), Positives = 106/255 (41%), Gaps = 20/255 (7%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 ++ + L + ++ +Y++ D L+ ++LA VS +++++F +K+ +GF K Sbjct: 5 KQIESLNDLELRVYEYVIKNHDRVLKLTIRELAKNIHVSTTTILRFCRKMDCEGFHEFKY 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L + +A + + + + + + N + +K+ + + Sbjct: 65 KLKDQIAETDK--------DFKLNTDDYAIIDYFERSNQPS--------EVQKILDATKI 108 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + +++II GIG SG++A+ + + IG A + + L+ +++ S Sbjct: 109 IHKSKQIIFLGIGTSGILAKYASRCFVNIGRFAVYIDYPYFLVPD--GFYDKMVIIVFSV 166 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL--YTIAEEQATNSASISACH 246 TG ++ + +++IT + + + + + Y + + N ++++ Sbjct: 167 TGETEDIIKQLRQFRNFDCIIISITNSEMSTIAKLSDLVISYYLPLQIKGDNKVNLTSQI 226 Query: 247 AQGMLTDLLFIALIQ 261 + + L L Q Sbjct: 227 PVMNIIEKLTFNLSQ 241 >UniRef50_C3RPM1 Predicted protein n=3 Tax=Bacteria RepID=C3RPM1_9MOLU Length = 278 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 35/258 (13%), Positives = 88/258 (34%), Gaps = 2/258 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L I Y + +L + +S +LA+ S +++ +F + L Sbjct: 16 NLLTYINASYSQ--DMYYTICYQVLNNIEKIPDISINELADLCYTSPATISRFCKALKCD 73 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F K + L + + + + + ++ + + + Sbjct: 74 NFAEFKKEVQVGLKQASHEIKLHPDDLVEIHQNPVHCVDMVYDLTINSLIESKKHINIHE 133 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + ++ A+++ G + ++A + +KL+K+G + A D ++ D Sbjct: 134 IDRLCDIIYDAKKLHFFGFQFNKILASDIQFKLVKLGKFSYAFADRGDDSQRIELLDEDS 193 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + +S + + KV+ +T + + + A +E +S Sbjct: 194 VAIVLSVRARLSPVGDLIKSIKNREAKVILVTLNAESEVIELADKTFVVHGKESDFTESS 253 Query: 242 ISACHAQGMLTDLLFIAL 259 IS D+L++ Sbjct: 254 ISGTTVMKTFFDVLYVRY 271 >UniRef50_UPI000196BB09 hypothetical protein CATMIT_01392 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196BB09 Length = 279 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 54/267 (20%), Positives = 110/267 (41%), Gaps = 6/267 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L + ++ + L ++D + Y++ + SS QLA E S +++++ +K+G+K Sbjct: 5 ILEQFKKDF-KLNENDLFIIQYIIEHSEEITSYSSHQLAKETYSSPTAIIRLVKKIGFKN 63 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + KL + L S + +I ++ L + KL K T + T + Sbjct: 64 YNDFKLNIHSLLNKYTLS-----NMRIMSNEDLYTIKNKLAKIETGIINQTKENLNSNVF 118 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 +E +T++ + I + A+ +++ + L + + + L + D Sbjct: 119 NEVMTIISRNKYIDIIANDANAAISEYGSHILSSVNKFVNVYHNGNRQLWFSLNVTSDHT 178 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ IS G R L AD + + + IT N L + + LY I + N + Sbjct: 179 VILISKFGKTRHLLNIADTLKQRHIPFIVITTDDTNDLAHKTPYVLYGINHGELDNLKDM 238 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPE 269 + + DL++ AL D + A E Sbjct: 239 IFYISLKYIFDLIYTALFSYDYKQAKE 265 >UniRef50_C3RHW9 Phosphosugar-binding transcriptional regulator n=2 Tax=Bacteria RepID=C3RHW9_9MOLU Length = 248 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 56/264 (21%), Positives = 107/264 (40%), Gaps = 23/264 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M R+ Q+ L +D + DY+ HLS Q++A + + +S+++ +KLGY Sbjct: 6 MKFEERVLQQEFTLNDTDDLIVDYIRKNKANLEHLSIQKVAEDLYLVPNSIMRLCKKLGY 65 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGF +K ++ ++ + +KL+ +Y ++ + + + Sbjct: 66 KGFAEMKFLVNNEVSENLD-------------------IQKLLS---KNLYKSMELINYK 103 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L E +++AR G+G S + L + A + + ++ Sbjct: 104 TLEEVAAKIKNARTCHFIGVGESLYFCEMMVDNLRCYDYRAEYYQTYREIEYRIKHCEEK 163 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L IS +G LN +E + G V+++T F N L A LY +EQ N Sbjct: 164 DILFVISASGENGRLNNWVEEAKQNGIFVISVTHFNENRLAGLAHIPLYYWGDEQKLNGY 223 Query: 241 SISACHAQGMLTDLLFIALIQQDL 264 +++ ML L + + Sbjct: 224 NVADRTGMMMLLREL-TEVFWRMY 246 >UniRef50_C9KM39 Transcriptional regulator GlvR n=2 Tax=Veillonellaceae RepID=C9KM39_9FIRM Length = 264 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 59/279 (21%), Positives = 97/279 (34%), Gaps = 28/279 (10%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I Q L +D + Y+L + ARH+S +LA VS +++V+FAQKLG Sbjct: 1 MRLDEIINTHRQSLNDTDMVIWKYILQHREVARHISIHELAKACCVSSTTIVRFAQKLGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK L P S + D GEK+ K N Sbjct: 61 DGFGELKAILKMEEQETPRYSSNVLE---DLSDFYLKTGEKIFKRN-------------- 103 Query: 121 KLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++ A R+ G V Q + + ++ + Sbjct: 104 -FDSASRLVHEANRVFTYASGYVQANVLQELKRLFFYDNVFLYDIPAREEFYSVLETLTK 162 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DDL + +S +G + A E+ +++IT N L ++ LY E Sbjct: 163 DDLFIIVSLSGETPAVVEFARELQLRDIPLISITKLHDNTLASLSTVNLYISPAEFQLYD 222 Query: 240 A------SISACHAQGMLTDLLFI---ALIQQDLELAPE 269 A S + ML ++ ++ + + E + Sbjct: 223 AEDGKHISFKSMMPYFMLIEVWYVKYRMYVHRLKERNIQ 261 >UniRef50_C7MYE5 Transcriptional regulator n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MYE5_SACVD Length = 310 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 56/280 (20%), Positives = 102/280 (36%), Gaps = 7/280 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 ++ R LA +++A LL P+ S + A AGV QSS+V+FA LG +G Sbjct: 25 LRAELQARMDSLAPGQQRIARLLLSDPEGTAFRSITETARLAGVHQSSLVRFASSLGLRG 84 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 +PAL E L Q + + +++ + + T + E+ Sbjct: 85 YPALVKLCRERLTEQVHLVHR--FESAQRHSASGDLLTSVVEHDQQNLARTFARVAPEEW 142 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASSPDD 181 V +L A R+ + G+ VAQ ++ L + + V L+ ++ D Sbjct: 143 ARMVDLLAEAPRVYVMGLRKCLSVAQLMSYLLHMVRPDVRLVAPVSGGLVDELRDLRAGD 202 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS + A + R G +A+T + L A L+ Sbjct: 203 VFVGISIRRYTADTVRAMELAKRRGAHAIALTDDAASPLAAIAELALFVETGGVTL---- 258 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + A L A+ + + + E L+ Sbjct: 259 LRSLSAFVSLVQAAATAVALRIGARSRSELLQDEELLDSF 298 >UniRef50_B8H4I3 Transcriptional regulator IolR n=2 Tax=Caulobacter vibrioides RepID=B8H4I3_CAUCN Length = 291 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 59/273 (21%), Positives = 111/273 (40%), Gaps = 11/273 (4%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I +RY L++ +++A Y+L +P+ + ++ GV S++V+FA+ GY G + Sbjct: 21 ILERYDSLSKRLQQIARYVLDEPNELALETLAVISERCGVQPSAIVRFAKTFGYPGASQM 80 Query: 67 KLALSEALASQPE----SPSVPIHNQIRGDDPL--RLVGEKLIKENTAAMYATLNVNSEE 120 + + L S S V N+ P V + ++ NT A+ S Sbjct: 81 QRLFRDGLLSGHAGLGYSERVRHFNEAVAMTPQGGADVLAEFVEGNTLALQNLGQTVSAA 140 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASSP 179 + + V+++ A + + G S VA A+ L + + VQ P Sbjct: 141 DMAKAVSLIDKAETVYVAGFRRSFPVASYLAYSLQQANKRTLFIDGVAGLTKQQVQTIGP 200 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DLL+A+SY E +AA+ + G K+L+I+ + + + A L+ E Sbjct: 201 KDLLIAVSYHPYAEETVMAAEMATQRGAKILSISDSLVSPIAKPAELVLHVRESEVR--- 257 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIR 272 + + A L L I + + + + Sbjct: 258 -TFRSLAASICLAQALVIGFAFEAGKEERKAQK 289 >UniRef50_C7HWU0 Putative uncharacterized protein n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HWU0_9FIRM Length = 285 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 43/269 (15%), Positives = 108/269 (40%), Gaps = 11/269 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + Y+ L +++K +ADY++ P+ +S +++ANE VS ++VV+ Q G+ Sbjct: 9 KVIDIFKNNYKNLFKAEKIVADYIINNPNKVTLMSVKEIANETKVSDATVVRMCQHSGFD 68 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF +K+ L + ++ D E + + + ++ Sbjct: 69 GFYQMKILLLRDIGEGNQN---------DIADFQDKPIEFFLNRKKSLINTINKEDNINN 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V+ L + ++ G + VA + ++L ++G LL + +D Sbjct: 120 IKKLVSKLLDSNITLIAATGNTLPVALDLEFRLNRLGIKTFTTSTNERLLNYTSNLNEND 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI--AEEQATNS 239 L+ IS +G+ + + +D K IT ++L + + +++ + + Sbjct: 180 FLITISKSGLSKNILKVSDIANNKNIKQACITSEINSSLSENSDITIFSGKLYNDINDSY 239 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAP 268 + + + ++ D++ + Sbjct: 240 NGLESHIGEFIINDIIIAFVASTKHNKNQ 268 >UniRef50_A5IVA6 Transcriptional regulator n=63 Tax=Staphylococcus RepID=A5IVA6_STAA9 Length = 254 Score = 174 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 95/261 (36%), Gaps = 20/261 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I + + L +D +A ++ D +++ Q LA S +++ +F +KLG+ Sbjct: 1 MFLDEHINRNFDKLNDNDLHIAHFINTHIDECKNMKIQDLAQFTHASNATIHRFTRKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ K L + PS I + +T + Sbjct: 61 DGYSDFKSYLKFESNKTHQLPSNSI------------------DSFKQEIDSTFSYLERV 102 Query: 121 KLHECVTMLRSARRIILTGIGASGL-VAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + +A I L G G + L VA L+ + + + D H L + S P Sbjct: 103 DYQLLTEKMHTASTIYLYGTGRAQLNVASEAQRILLTLHNHVIVLHDEHELKMILNKSEP 162 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-N 238 +DL IS +G EL + + +++T N L Q+A++ +Y + + Sbjct: 163 NDLFFIISLSGETHELLEVTNLLQLRQKYFISVTTMKDNTLAQKANYNVYVSSNTFYLTD 222 Query: 239 SASISACHAQGMLTDLLFIAL 259 S+ + + + L Sbjct: 223 GTDYSSFISYHIFFETLVRKY 243 >UniRef50_A6M092 Transcriptional regulator, RpiR family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M092_CLOB8 Length = 236 Score = 174 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 36/252 (14%), Positives = 96/252 (38%), Gaps = 21/252 (8%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 Q +++ K+ +++ + +++ ++LA+ VS S++++F KL G+ K Sbjct: 5 DNIQRFNETEIKIYKFIIDNEEKIHYMTIRELASAIQVSTSTIIRFCNKLDCDGYKKFKE 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L + + +I L + K N + K+ + + Sbjct: 65 RLEKYVHRMQ---------EIPPQSDLTEMLNYFKKTNINSFEQ--------KIEQGGEV 107 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 +R + ++ G G+SG +A+ A +G + + D + +++A+S Sbjct: 108 IRKSETVLFLGSGSSGALAKYGARYFSNLGKFSMGLEDT---FYPITKDMKTTVVIALSV 164 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA-SISACHA 247 +G + + ++ +L+IT + + + + + + + N + + Sbjct: 165 SGETKGVIDLINQFKVSKCIILSITNQSNSTIAKMSDWNISYNMDMHQANGGYNATTQVP 224 Query: 248 QGMLTDLLFIAL 259 L + L + Sbjct: 225 VLFLIEALARRI 236 >UniRef50_C6L8R9 Putative phosphosugar-binding transcriptional regulator n=3 Tax=Clostridiales RepID=C6L8R9_9FIRM Length = 289 Score = 174 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 42/243 (17%), Positives = 99/243 (40%), Gaps = 16/243 (6%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLS----SQQLANEAGVSQSSVVKFAQKLGYKG 62 IR +Y+ Q +K +AD+ + + + + ++ +A VS++S+ +FA+K G++G Sbjct: 12 IRTKYESFTQIEKCIADFFTDEERLSGYGTEELAAKNVAERLFVSEASLSRFAKKCGFRG 71 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + + ++L + + ++ + T N+ E ++ Sbjct: 72 YREMIYQYEKSLRDVRRKKHADNN------------IQMVLDLYQEVLNKTYNLVDETQI 119 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V + +A R+ + G+G+SG A + +IG + +++D + +P L Sbjct: 120 LHIVRCMNTANRVYVCGMGSSGQAACEMESRFARIGVDIDSIQDADRMRMQTVFMNPGKL 179 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ +S +G E+ E + + + T L+Q + + + I Sbjct: 180 VIGLSLSGETEEVLYLLRESGKRKAQTVLFTANEREQLRQYCTEVVRLPSFRYMNFGNVI 239 Query: 243 SAC 245 S Sbjct: 240 SPQ 242 >UniRef50_D2EJM8 Phosphosugar-binding transcriptional regulator n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EJM8_PEDAC Length = 249 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 96/268 (35%), Gaps = 38/268 (14%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M +R + L ++++ + +Y+L+ ++ LA +++ +F +KLGY Sbjct: 1 MKFAIRAQNLEYKLTETEENIVEYILVHQAEVINMKIVTLAERFFTVPNTITRFCRKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+ L L + + A + + E+ Sbjct: 61 GGFTELKVELRHELLEKQTG-----------------------NQQLALIEENFGLVDEK 97 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL-------AT 173 + + +L+ AR + AQ+ + ++G V D L + Sbjct: 98 REIKLAKLLQKARLVNFY--------AQDQTHLIAELGVECFQVLDSKFQLLGYEKEVLS 149 Query: 174 VQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE 233 + D+ IS +G + A + G +V+++T + N+L A +Y + E Sbjct: 150 RINNGAGDVFFFISISGETPAIVNLAKKAKERGHQVVSLTNLSNNSLSAIADVAIYCLTE 209 Query: 234 EQATNSASISACHAQGMLTDLLFIALIQ 261 ++ ++ LF ++ Sbjct: 210 VTYIAGIEVTDKTPMFVILQSLFQRYLE 237 >UniRef50_B3WB04 RpiR-like protein n=8 Tax=Lactobacillus RepID=B3WB04_LACCB Length = 250 Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 95/254 (37%), Gaps = 10/254 (3%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 L+ ++ L DY+ + S QL+ A VS ++VV+ +K G+ G+ + L Sbjct: 1 MATLSPTEAYLWDYIENHQQAVVNASITQLSTAANVSPATVVRTMKKKGFNGYTDFRHDL 60 Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 + D + +K+I +N +Y TL + + V +L Sbjct: 61 LKRTGDAA---------PFSILDQVDDQIKKVIMQNQVEVYNTLENLKVSVIEDSVQLLA 111 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 A +++ G S +A KL +G A D + + SP + + I+ G Sbjct: 112 KAEIVLILARGLSESIASEVTLKLQLLGKYAEFFSDPNIIQTIAGQVSPKAVAITITLNG 171 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY-TIAEEQATNSASISACHAQG 249 EL AA + + +T + Q A ++ + +++ Sbjct: 172 ETPELVAAAKTLAARDIPQIILTTNAEAPIVQYADELFVGYKSKAAYFDKYEVASRLPLQ 231 Query: 250 MLTDLLFIALIQQD 263 +++ +L + + + Sbjct: 232 VMSRILLDSYVVRK 245 >UniRef50_C3RPB8 LacI-family transcriptional regulator n=2 Tax=Bacteria RepID=C3RPB8_9MOLU Length = 255 Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 47/246 (19%), Positives = 98/246 (39%), Gaps = 20/246 (8%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 ++ L +++ + Y++ ++S + LA VS ++VV+F QKL GF K Sbjct: 6 KQIANLNETETFIYRYVMKHIKVVTNMSVRDLAECTHVSTATVVRFCQKLDCNGFVEFKT 65 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L + D V + +V+ +EK+++ V Sbjct: 66 KLK----------LFNDGLTLPETDDEIDVLLEFFNYA-------RSVDFKEKINKFVKY 108 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 ++ A+ I GIG SG + + A +G+ + ++ D + + LL+A++ Sbjct: 109 IKEAKSICFLGIGTSGTLGKYGARYFSNVGYYSQSIDDPYYPPPV--DGNESSLLIALTE 166 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-NSASISACHA 247 +G RE+ K++ IT + + Q A +Y ++ + +IS+ Sbjct: 167 SGETREVIDQLKMYQSQNTKIVVITNKPGSTIDQMADLGIYYYVKDIILPQTYNISSQVP 226 Query: 248 QGMLTD 253 + + Sbjct: 227 VLYILE 232 >UniRef50_C2APV8 Transcriptional regulator n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2APV8_TSUPA Length = 303 Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 57/282 (20%), Positives = 96/282 (34%), Gaps = 7/282 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M ++ + A +++A +L P+ + + A A V QSS+V+FA LG Sbjct: 23 MELRTVLQAQMDRFAPGQQRIATVILTDPEGTALRTIAETARIAEVHQSSLVRFATGLGL 82 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+PAL E LA Q S +D + + + + T Sbjct: 83 SGYPALVKLCREHLAEQAHLVSRFDRAAAEHEDS--ELFLAAVDNDQQNLSRTYARIDSH 140 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASSP 179 + VT L A + + G+ VAQ FA+ L + + L+ ++ Sbjct: 141 QWSRTVTALAEAPNVHVMGLRKCLGVAQMFAYLLHMVRPGVHQIAPPMGGLVDQLRDLHT 200 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD+ + IS + A R G +A+T + L A Sbjct: 201 DDVFVGISIRRYTADTVNAMRYARRTGLHTIALTDDAASPLAAVADTTFLIDTHGVTI-- 258 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + A L L A+ + EAL+ + Sbjct: 259 --FRSMSAFTSLIQSLSTAVALARGARTRNELAQDEALLDEF 298 >UniRef50_C3RNE4 Transcriptional regulator n=3 Tax=Bacteria RepID=C3RNE4_9MOLU Length = 263 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 53/270 (19%), Positives = 104/270 (38%), Gaps = 20/270 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + + L +SD + +Y+ + ++ + L + VS++++++F++K+G Sbjct: 1 MQLNELVNLHFDDLNESDLYIWNYINNHREVCTKITIEDLGKKCNVSRTTILRFSKKIGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GF LK L ++ L + + + N Sbjct: 61 EGFAELKYYLRNEQTLADVGLGKTVN------------IYALFENHAKMIRELQNR---- 104 Query: 121 KLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + C M+ A+RI + G VA+ + + +K+G V + +A + Sbjct: 105 DYNTCCRMIDHAKRIFVVSSGTIQRSVAKELSRQFLKLGIIMTLVNGDSEINMLARAITA 164 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-N 238 DDLL+ IS TG + A VG K ++IT N+L A +Y + Sbjct: 165 DDLLIIISLTGESESVIRIAKVAKTVGSKTISITRINANSLSLLADEPIYIFFGDFPIVF 224 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAP 268 + ++ LT+LLF + + Sbjct: 225 ETAYTSPTMFFALTELLFANY--HNYQQKK 252 >UniRef50_B9DUC4 RpiR-family regulatory protein n=1 Tax=Streptococcus uberis 0140J RepID=B9DUC4_STRU0 Length = 289 Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 53/263 (20%), Positives = 115/263 (43%), Gaps = 5/263 (1%) Query: 21 LADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL-SEALASQPE 79 +A+ +L D+ LS + +A + S+SSVV+FAQ LG+KG+ AL SE + + Sbjct: 25 IAETILEHLDSIEQLSLEDIARLSFTSKSSVVRFAQSLGFKGWVDFLPALLSERIYADAH 84 Query: 80 SPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTG 139 ++ DD ++ + +K+ ++ T + S+E+L + L A+RI++ G Sbjct: 85 YSNIDHSLPFNQDDSIKAIIQKIATIEKESIQDTADQLSQEELEKASQQLAKAKRIVVFG 144 Query: 140 IGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG--VRRELNL 197 + + +A F K++ +G N + T + S DD+ + ISY+G + + Sbjct: 145 LSPNDYLAHLFKRKMLTLGKNIE-IAHSSEFGLTAASLSQDDIAILISYSGISEKNDTLR 203 Query: 198 AADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE-QATNSASISACHAQGMLTDLLF 256 + + + ++ + L++ ++ E + + S + + + L+ Sbjct: 204 HLPLLEKNKVFRIGLSSQNGHYLKEHSNAFFQICTREDKHKKIGNFSTEESILFILNTLY 263 Query: 257 IALIQQDLELAPERIRHSEALVK 279 + D R + ++ Sbjct: 264 AVYFKADYMKNYIRKLNLSQALE 286 >UniRef50_UPI0001973198 transcriptional regulator, RpiR family protein n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001973198 Length = 325 Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 56/283 (19%), Positives = 105/283 (37%), Gaps = 11/283 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RI L D+ + DY++ A ++ Q+A +AGVS S+ V+ + +LG++ Sbjct: 45 LEARIAAAR--LTPRDRAVLDYIVKNKKEACFETAAQIAKKAGVSASAAVRVSGRLGFES 102 Query: 63 FPALKLALSEALASQPESPSV---PIHNQIRGDD--PLRLVGEKLIKENTAAMYATLNVN 117 F K AL L + E + +I+ D + + + + N Sbjct: 103 FAQFKRALQAELKRELEGGMKVRPIPYEKIKSYDGLTDEELIGAIRQNALRNIERDQNPG 162 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 +L A R+ L G A A +F L + V + T+ Sbjct: 163 DYGSCSRAADILSEAERVFLVGFRACAGFAASFGVMLSCVRPGVHVVNGSCPTVDTLVDL 222 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 + D + ISY E AA + G +++A+T + + A L E + Sbjct: 223 TGRDAVAVISYDRYSSEAVFAASMARKAGSRIIAVTDRPSSPVCAGAEAILLNSTENLSF 282 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ + M ++L + + E ER++ E + + Sbjct: 283 ----YNSYVSLVMTMEVLTGLMSSRGREQNEERLKKMEEFLTE 321 >UniRef50_D2EIN0 Putative uncharacterized protein n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EIN0_PEDAC Length = 271 Score = 173 bits (439), Expect = 7e-42, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 96/280 (34%), Gaps = 18/280 (6%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N +L I + + D+ +A+Y + R LA + VS SS+ +F+ K+G Sbjct: 7 NLILMIESKREQFTDVDQIIANYFVAH-QEVRD--INGLAKKLAVSPSSITRFSHKIGLS 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + L E L S S + ++ A T + E+ Sbjct: 64 NYKELVFLYKEYLGSLNRKVSR--------------ISSDVVDSYRAIAQRTSDRYDEQT 109 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + R I G+G + V +F ++ + G D ++ D Sbjct: 110 VQLFCERIFKNRIIFFWGLGFNSFVGLDFEFRFARFGKIVQHFSDQQSISLNANFLKKGD 169 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 LL S + + + + + G +L IT +A +YT + + + Sbjct: 170 TLLISSISAKDKSILKSIETAKARGAHILLITANHESAYLPYCDGVMYTASFSPEESLGN 229 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 IS + D+++ I + SE ++K Sbjct: 230 ISPQVPALIDLDIIYSKYIDLHQHD-LSQWAKSENILKNW 268 >UniRef50_A6LRA2 Transcriptional regulator, RpiR family n=3 Tax=Clostridium RepID=A6LRA2_CLOB8 Length = 247 Score = 173 bits (439), Expect = 7e-42, Method: Composition-based stats. Identities = 38/237 (16%), Positives = 91/237 (38%), Gaps = 19/237 (8%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 + + L + + +Y++ D R++ ++LA E+ VS ++++ F +K+G G+ KL Sbjct: 5 SQIKSLNDLEISVYNYIMDNKDKVRYMKIRELAVESHVSTTTILNFCKKVGCSGYSEFKL 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 + + + +I T +EK+ E V Sbjct: 65 KFKLFIEEKEIKKVSEDNTEI-----------------IDFFKKTNTEEYDEKIEEIVKA 107 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + A+R I G SG++A+ A L +G + + D + T + +++ S Sbjct: 108 ILKAKRTIFIGSSMSGIIARYGARYLSSVGQFSLCIDDPY--YPTTGKFYENSVVIVCSV 165 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 +G +++ + + +++IT + + + + + I+ Sbjct: 166 SGESKDIIGHINRFKKDNCCIVSITNTENCTIAKMSDYNIPYYVPYVKVGIYDITTQ 222 >UniRef50_A6M2I0 Transcriptional regulator, RpiR family n=3 Tax=Clostridiales RepID=A6M2I0_CLOB8 Length = 248 Score = 172 bits (438), Expect = 9e-42, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 103/266 (38%), Gaps = 21/266 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I + Y+ L +SD + Y+L + +S Q+LA++ VS +++++F KLG Sbjct: 1 MKLETLIDENYEKLNESDLYIWKYILHHKKECQTMSIQELASKCNVSHTTILRFTHKLGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +G+ +K+ L + K I++ + T+ + E Sbjct: 61 QGYSEMKIHLKWEDKQRNSFD------------------NKEIEKTYKDIEKTMEIMKER 102 Query: 121 KLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++ ++ A +I + G GA A++ ++ + + A S Sbjct: 103 DFYDVFELVEKADKIYVYGSGAVQKNAAKDLKRSMIFGNKLIYVIEGREETNIILDALSS 162 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL--YTIAEEQAT 237 D+ +S +G +N A ++ K+++IT N L + L YT Sbjct: 163 KDIFFLLSLSGNNLFMNEFAQKLKEKDVKIISITQVGNNELASISDISLQFYTHPISVGE 222 Query: 238 NSASISACHAQGMLTDLLFIALIQQD 263 N + + ++ +L + ++ Sbjct: 223 NKTKLYSTTQFFLINQILLLKYLEYR 248 >UniRef50_C0CQ65 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CQ65_9FIRM Length = 285 Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 56/282 (19%), Positives = 110/282 (39%), Gaps = 9/282 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M R+ Q L ++++K+ + ++ A + QLA GVS S V + QKLGY Sbjct: 1 MTLAERVEQT--KLTRTEEKIVEMVMNDISKAAFFNGAQLAAFCGVSASLVTRLIQKLGY 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + F KL L + + Q +P + + I ++ + A NS E Sbjct: 59 QSFNEFKLEL-QEIYRQEVTPYDIFQKYLSEEGSKNSSIHAFIAQDIENLAAIEQNNSAE 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHAL-LATVQASSP 179 + + A+++ + + AS A+ A L ++ V D+ P Sbjct: 118 TIDAVANAVHKAKKVYILAMFASESPARTLAHYLDRLNIPYQCVFDLGLSKKIEYIRPKP 177 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +D+++A S+ G+ +E+ A + + + +++IT N L + + + L + Sbjct: 178 EDVVIAFSFQGILKEIYEACEYIHQGKTPIISITDTKANRLTRLSDYSLTVSVSGSVFDY 237 Query: 240 ASISACHAQGMLTDLLFIALIQQ-DLELAPERIRHSEALVKK 280 + A + +L L + E R K+ Sbjct: 238 ----SHVATMAMVTILANRLADTFEPEYLFSRFAQIRNEWKE 275 >UniRef50_A1WR14 Transcriptional regulator, RpiR family n=25 Tax=Burkholderiales RepID=A1WR14_VEREI Length = 334 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 58/267 (21%), Positives = 103/267 (38%), Gaps = 11/267 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L I Q Y+GL++ K ++ ++ D Q +A + GV S++V+FA+ G+ G Sbjct: 40 FLQCISQEYEGLSKQLKAISRHVEAHRDHLGLQGIQSVAEQCGVQPSAMVRFAKHFGFSG 99 Query: 63 FPALKLALSEALASQP---ESPSVPIHNQIRGDDP---LRLVGEKLIKENTAAMYATLNV 116 F ++ E LA Q + ++ + + I + ++ IK + A M Sbjct: 100 FSEMQRLFREGLAEQIAPGRAYNLRLRDVIEAGSTSLQSPQIADEFIKGSIAGMQQLRQE 159 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQ 175 ++ V +L + I + G S VA + L + ++ Sbjct: 160 LDQQAFARAVELLADTQAIWIAGSRRSFPVAVYLDYALQHTEKRIGLLNALGSMQQGQIR 219 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 + D+L+AIS+ E A + + G +V+AIT L + A L Sbjct: 220 SVRAGDVLIAISFNPYAEETLQVAQQATQRGARVIAITDSRMGPLARTAEATLIVQDSAT 279 Query: 236 ATNSASISACHAQGMLTDLLFIALIQQ 262 A A L LF+AL + Sbjct: 280 F----GFRALTATMGLAQSLFVALAYR 302 >UniRef50_D2EJX0 Transcriptional regulator n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EJX0_PEDAC Length = 253 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 43/247 (17%), Positives = 92/247 (37%), Gaps = 17/247 (6%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 +R Q L Q + + Y+ + + ++ + L+ ++ VS ++V++F +K+GY+GF K Sbjct: 5 ERIQTLNQLEMFVYKYVAGHLEECKTMTIRDLSAKSHVSSTTVLRFLKKMGYEGFSDFKY 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 AL I + + +K+ + Sbjct: 65 ALRHHDKPDRFGQVEQEWGPIAQFLTQANLPKY-----------------RQKISAVAQL 107 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 A + G+G+S +AQ A L G + A+ D + L++ +S Sbjct: 108 FLKAHTRLFLGMGSSSSLAQYGARVLSNYGLFSLAIMDPYQPQPIEGRDYTKTLIMFLSV 167 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 +G + A+ + G +A+T + L + HCL E+ + ++ Sbjct: 168 SGESDAILRQANYYRQNGATTVAVTANHLSTLARVCDHCLAYDIPEKKVGTLDFTSQVPV 227 Query: 249 GMLTDLL 255 + + + Sbjct: 228 VYVLEQI 234 >UniRef50_A8RA11 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RA11_9FIRM Length = 248 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 52/255 (20%), Positives = 115/255 (45%), Gaps = 14/255 (5%) Query: 8 RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALK 67 + Y+ L++++K + +L + ++S +A + SQS+V + QK GY+G L+ Sbjct: 7 KTIYEKLSEAEKGVIQFLNQNEEKIPYMSITNIAEKTFTSQSTVSRTIQKCGYQGISQLR 66 Query: 68 LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 A+S+ + S ++ ++ T++ S + + + Sbjct: 67 FAISQQEQMKNHHESSYG-------------VNNILSKSYRESTKTIDNISPVAMLQTIE 113 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAIS 187 +++A+RI + G + L+A+ F L +G+NA V+D+ + T + + +D++ +S Sbjct: 114 FMKTAKRIFIFSRGFTALIAEEFQMYLQLLGYNAIIVKDVKWMENTERIVNTNDVVFILS 173 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA-SISACH 246 EL +A R G KV++ +P L+ + +Y +E+ S ++ + Sbjct: 174 VRNTTPELATSARAAKRKGAKVISCCCKSPCELENFSDIIIYGHSEQIMKASGMTVYSRI 233 Query: 247 AQGMLTDLLFIALIQ 261 ++T + L Q Sbjct: 234 PLLIITRTIIEYLGQ 248 >UniRef50_Q04H60 Transcriptional regulator n=2 Tax=Oenococcus oeni RepID=Q04H60_OENOB Length = 242 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 101/256 (39%), Gaps = 17/256 (6%) Query: 8 RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALK 67 ++ ++ + D+L+ D + + LA VS +SV++ +K+G+ F LK Sbjct: 3 QRNIFNFTSTETDIYDFLMSHKDEVIKSNLRNLAKTIHVSPASVLRCIKKMGFNSFYELK 62 Query: 68 LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 L + I D L+ + + NV Sbjct: 63 FDFRNKLQAIQVYGQSDHLIDISRD----FFNRPLLDQYQNTITDIKNV----------- 107 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAIS 187 + +++ + GIG SG++A+ + + G N+ +D + ++ +++ +S Sbjct: 108 -IENSKMVFFFGIGTSGILAEYGSRQFANFGINSFYNKDPYYPFQLIEKDISSTVMVVLS 166 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL-YTIAEEQATNSASISACH 246 +G E+ + + K+++IT + + + + + L Y I EE + + ++ Sbjct: 167 VSGETHEVIKQITSLKNLKCKIISITNTSYSMVAKLSDINLSYNIGEEVFPDEINATSQI 226 Query: 247 AQGMLTDLLFIALIQQ 262 L +LL L ++ Sbjct: 227 PVIFLLELLARELKKK 242 >UniRef50_C5EFT9 HTH-type transcriptional regulator glvR n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EFT9_9FIRM Length = 256 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 52/263 (19%), Positives = 108/263 (41%), Gaps = 19/263 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN I Q Y+ L +D + +Y++ +++ +L++E +S +S+V+ +KLG+ Sbjct: 1 MNLEALINQYYKNLNSNDMIVLNYVMQHKKECTNMNISRLSSECSISTASIVRTMKKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ K L + + G LI+ + AT+ + + Sbjct: 61 SGYSEFKFLLKG-----------------QNPGNMPTEGSNLIELLEKDIQATMKLMKQV 103 Query: 121 KLHECVTMLRSARRIILTGIGASGLVA-QNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 L+ +T+L +A+RI G G A Q+FA ++ + + L + Sbjct: 104 DLNPILTLLYNAKRIYGFGTGFRQQNALQDFAHNMVSCDKSIFLIPAKQELDTQISFMKQ 163 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D++L SY+G ++ + + + +++IT F N L + LY + N Sbjct: 164 GDIILIASYSGDIKDYVESIHTLKLLDIPIISITNFNKNDLSTFTPYNLYYQSTSLTPNL 223 Query: 240 ASISACHAQGMLT-DLLFIALIQ 261 + + D+L+ ++ Sbjct: 224 KPKRISYPTLNIVQDILYREYVR 246 >UniRef50_Q38ZK5 Putative transcriptional regulator, RpiR family n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Q38ZK5_LACSS Length = 248 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 102/250 (40%), Gaps = 15/250 (6%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 + ++++ L DY++ D ++ S ++LA E VS ++ ++F +K+G+ G+ + Sbjct: 1 MNKNEQILLDYVIKNMDDIKNRSIRELAAECFVSTTTFLRFVRKIGFSGYSEFITVIKYT 60 Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKE--NTAAMYATLNVNSEEKLHECVTMLRS 131 + +Q ++ V V ++ + T+ V +KL+ VT++ Sbjct: 61 ILNQDQTEEVNPF-----------VVNQVANRTEYLKNINETVRVLDNDKLNAIVTLMTK 109 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGV 191 ++ G S A+ + GF ++ + + DD+L +Y G Sbjct: 110 KPKLYFFAKGFSKYAAEYIEYLYTLKGFIVIFPKNYEQRQLAYRNINQDDILFVFNYEGE 169 Query: 192 RRELNLAADEM--LRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQG 249 +EL + K+++IT N +Q + LY +E + +++ + Sbjct: 170 DKELIEILQIIERKCQYAKLVSITSANNNTIQNMSDINLYLFTDELYQHKVEMTSHVSLI 229 Query: 250 MLTDLLFIAL 259 + +LL Sbjct: 230 AIMELLLYQY 239 >UniRef50_C2EL56 RpiR family transcriptional regulator n=4 Tax=Lactobacillus RepID=C2EL56_9LACO Length = 251 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 101/265 (38%), Gaps = 25/265 (9%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 L+ + + +++ P+ ++ + +AN+ V+ SSV++F KLG+ FP K L Sbjct: 9 LSSLSDVELTVYRFVVNNPEKVVYMRVRDIANQTHVANSSVMRFIHKLGFGSFPEFKAYL 68 Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 + I + ++ L + K + +L Sbjct: 69 K---NINQTVATRHIFTFVNQNNFLPDIENK--------------------IRLVADLLY 105 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 + I L GIG S A A L +GFNA + D L ++ ++ +L S +G Sbjct: 106 QSDNIPLLGIGNSASTAMYAARILALLGFNAFPITDPFYPLNKQLENTSNNTILCFSVSG 165 Query: 191 VRRELNLAADEMLRV-GGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSASISACHAQ 248 EL + + +V+AIT + + + + L +++ +S+ Sbjct: 166 ETEELIEQLNYCTKRPDNQVVAITSNPTSTIANISKYVLAYKEQKQRLFKYCDLSSQIPA 225 Query: 249 GMLTDLLFIALIQQDLELAPERIRH 273 + + L LI ++ +L E Sbjct: 226 MYIVEALAQVLISKNQDLTNENKAQ 250 >UniRef50_A3TM76 Putative uncharacterized protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TM76_9MICO Length = 282 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 57/278 (20%), Positives = 105/278 (37%), Gaps = 6/278 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M R+R+ L+ +K LA LL +A +S A VS ++VV+FA+ LGY Sbjct: 1 MTVADRVRRDMSSLSPREKLLARALLSDYPSAALGTSSDFGRAANVSAATVVRFARSLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF L+ L L+ + SP R + + +L + Sbjct: 61 GGFSELQAGLVAELSERAASPVSQYGESTDRRTGSRHWFDDAVAVTVGEAARSLEAIPKA 120 Query: 121 KLHECVTMLRS-ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASS 178 + V +L RR+ + G SG +A+ A+ L ++ + + D + + + Sbjct: 121 DIDAAVALLSDPKRRVCVLGGRYSGFIARYLAFHLQQVRPGVSTLDDAMNTGSSLAIDAR 180 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D+ + + AA + G ++ +T + + A+ L T Sbjct: 181 RRDVAVIFDLRRYQSSTVEAAVALSAKGTTIICVTDEWLSPVADVATVTLTTSVASV--- 237 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + A +L +LL ++Q + A R+ E Sbjct: 238 -GPFDSAAAAFVLAELLVDGVLQSLGQKALRRMEKWEQ 274 >UniRef50_Q0C066 SIS domain protein n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C066_HYPNA Length = 276 Score = 170 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 45/269 (16%), Positives = 101/269 (37%), Gaps = 12/269 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L+I++ Y+G ++ + +A Y+L P+ + +A GV S+VV+ A+ LG+ G Sbjct: 9 LRLQIKREYEGFSKQLRIVAQYILDHPNEIGLETVTVVAERMGVQPSTVVRLAKVLGFDG 68 Query: 63 FPALKLALSEA-------LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLN 115 L+ + L + + + V ++ ++ + + Sbjct: 69 ASQLQKLFKDEVVNSAGALGYKERIRRYKAPASNAKSNHVSSVLDEALECGILGLEDLRH 128 Query: 116 VNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLA-TV 174 + ++ V ++++A I + G S VA ++ L ++ N + L + Sbjct: 129 SMNASEIATAVKLIQTASTIYVAGFQRSFPVAAYLSYALQRLRKNTIFIDGTGGLYEHQI 188 Query: 175 QASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE 234 ++ DDLL+AI + ++ D+ R K++ I+ + + A Sbjct: 189 SFANKDDLLIAIGFNPYSDQIVATLDQAKRNKLKIVGISDSHVSPVVSGAHAPFIVHDPV 248 Query: 235 QATNSASISACHAQGMLTDLLFIALIQQD 263 + L + +A D Sbjct: 249 VR----GFRTLTSSMTLAQAIVLAYAFSD 273 >UniRef50_B5ZFL0 Transcriptional regulator, RpiR family n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZFL0_GLUDA Length = 285 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 49/272 (18%), Positives = 97/272 (35%), Gaps = 8/272 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 IR RY L + ++AD ++ PD + +A+ AGV S++++FA+ G+ G Sbjct: 18 LRDDIRARYDSLPKRLAQVADAIMAAPDDFTFGTVSSVASVAGVQPSTIIRFARAFGFHG 77 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDD---PLRLVGEKLIKENTAAMYATLNVNSE 119 F +++ E L + + + D P ++ E ++ Sbjct: 78 FSDMQVVFRERLRGRASTYQARLDALRGPDGASPPATMLLEGFAHALEQSLTRLRASIDA 137 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFN-AAAVRDMHALLATVQASS 178 E+L +L A + + G+ S VA ++ L K+ ++ Sbjct: 138 ERLERACAVLAEAETLFVLGLRRSAPVADYLSYLLNKLSIRHVDVRSATGMEDEIASFAT 197 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D + ISY+ R ++ VG + +T + + L+ EQ Sbjct: 198 HRDAAIVISYSPYARRTIEVFNQFQAVGVPTIVLTDSPFSPVVPAG--GLWFEILEQDFQ 255 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPER 270 + A L L ++ + +R Sbjct: 256 G--FRSNAAATALVMTLATSVAKIRDVKGRKR 285 >UniRef50_B2SAV7 SIS domain protein n=40 Tax=Alphaproteobacteria RepID=B2SAV7_BRUA1 Length = 286 Score = 170 bits (431), Expect = 5e-41, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 102/258 (39%), Gaps = 6/258 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R+ + L + K+ ADY+ D + ++A AGV S+ ++F Q LG+ G Sbjct: 27 FEARLLEVADRLPKRLKQCADYVAANQDRIAVSTVAEMAEGAGVQSSAFMRFCQILGFSG 86 Query: 63 FPALKLALSEALASQ-PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F ++ E A P+ + +H + + + + ++ L E Sbjct: 87 FSEMQRLFRETYAGGWPDYSTRLLHLRETAAGRAPALLAEFAEAGRTSLEGLLKTIEPEA 146 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + V +L SA I + GI + VA A+ L K+ A + L + A D Sbjct: 147 LEKAVELLASANTIHIIGIRRAFPVASYLAYALEKMAVPAMLHSAVGK-LENLHAIHKGD 205 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +LLAI+++ E + + G V+ IT + + + A L + + Sbjct: 206 VLLAITFSPYSPETIGMTEAVAARGIDVIGITDTIVSPMSKVARQTLLVS----EVDFGA 261 Query: 242 ISACHAQGMLTDLLFIAL 259 + A L + +A+ Sbjct: 262 FRSLSATLCLAIAIAVAV 279 >UniRef50_B2V3J3 Transcriptional regulator, RpiR family n=2 Tax=Clostridium botulinum E RepID=B2V3J3_CLOBA Length = 252 Score = 170 bits (431), Expect = 6e-41, Method: Composition-based stats. Identities = 49/263 (18%), Positives = 102/263 (38%), Gaps = 20/263 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I Y L Q+D ++ +Y+ + + ++ +Q+AN+ VS++++++F +KL Sbjct: 1 MKIYELINNNYDKLTQNDHEIFNYISNNQEQCKDMTCEQVANKCHVSRTTLLRFCRKLNL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F LK L + E S+ I ++ + T++ Sbjct: 61 NSFAELKYLLKSSACKVYEDSSLDI------------------EKACQTYHKTIDEIKGH 102 Query: 121 KLHECVTMLRSARRIILTGIGASGLV-AQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + +++ +A I + G G + A+ F + G + D+ + + Sbjct: 103 EYKNICSLIYNAETIYIYGTGNAQKAEAEEFKRIFLSAGKCVVDLFDLGEVQLIQNKFTG 162 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE-QATN 238 DL + IS +G E + ++IT F N + + LY + Sbjct: 163 KDLFVIISLSGETIEGIEILKSIESRKINTMSITRFQNNTIARMCKDNLYVSTKMLHGFK 222 Query: 239 SASISACHAQGMLTDLLFIALIQ 261 + S A +L D+LF+ ++ Sbjct: 223 NLSYEMTAAFYVLLDILFVYYLE 245 >UniRef50_D2NRV5 Transcriptional regulator n=2 Tax=Rothia mucilaginosa RepID=D2NRV5_9MICC Length = 272 Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats. Identities = 39/275 (14%), Positives = 96/275 (34%), Gaps = 21/275 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + +++++++ ++L + + LA++ S SS+++ +KL + Sbjct: 1 MDLQDVVNANQHRFSETEREILAFMLENEEFVAESTINSLAHKTYTSTSSIIRLTKKLNF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK + +L + I+ + T + Sbjct: 61 SGFAELKYFIKSSLNRSEPFNP------------------RFIESGREDIQRTYDYLEHM 102 Query: 121 KLHECVTMLRSARRIILTGIGASGLVA-QNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 +L + + AR + G G + A Q F + G + + + + + Sbjct: 103 ELSGLLKRIHEARTVYCFGTGYAQRNAVQEFTKSMQVCGKFCQVIPARNEFESAMNNMTQ 162 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-- 237 DD+++ +S++G + + ++A+T N + A + L+ Sbjct: 163 DDVVIIVSFSGQTENMREHIKMLALRRIPMIAVTAIGVNYMSSHAEYSLHYQTTPTQIST 222 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIR 272 + A +L D + I+ E ++ Sbjct: 223 QRKPYYSFVALSVLLDYIVRRYIEHVENERRESLQ 257 >UniRef50_UPI00019039EA RpiR family transcriptional regulator n=2 Tax=Rhizobium etli RepID=UPI00019039EA Length = 290 Score = 169 bits (430), Expect = 7e-41, Method: Composition-based stats. Identities = 59/276 (21%), Positives = 113/276 (40%), Gaps = 8/276 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RI+ +Y L S++ LAD +L P S+ +L+ VS+++V +F ++LGY+ Sbjct: 11 LEERIQSQYDDLPGSERALADLILEFPGDLLVYSATELSERGRVSKAAVTRFVKRLGYQD 70 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + ++ + EA Q V ++ + G P R ++ ++ + A + T S + L Sbjct: 71 YREMQREVREA---QEAGEPVYLNTGLLGPAPDRTRLQQHLERDIANLRQTFEAVSPDDL 127 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLA-TVQASSPDD 181 E V +ARR+ + G S A +L+++ + V L + ++PDD Sbjct: 128 GEVVRRCLTARRVWVLGFRNSYFFAAYIRRQLIQVRSDVTLVPAAGQTLMEELAGATPDD 187 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++A+ L A + +G + T + A+ + Sbjct: 188 LMIAVGLRRRTSALGRAMKIVRDLGVPIAFFTDRVAVTTPKFATWTFPCQVRGMSL---- 243 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + A L + L ++ E ER+ E L Sbjct: 244 FDSYVAVISLANYLCTEVVAAAGEGGRERLSRIEDL 279 >UniRef50_A9BRR5 Transcriptional regulator, RpiR family n=2 Tax=cellular organisms RepID=A9BRR5_DELAS Length = 299 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 54/279 (19%), Positives = 105/279 (37%), Gaps = 11/279 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +R+ ++ L++ K + ++ +Q D Q A + GV S+VV+FA+ G+ G Sbjct: 25 FLTVLREGFEALSRQLKAIGRHVEMQGDRLAFDGIQATAEQCGVQPSAVVRFAKHFGFSG 84 Query: 63 FPALKLALSEALASQ---PESPSVPIHNQIRGDD---PLRLVGEKLIKENTAAMYATLNV 116 + L+ A Q I I + + ++I+ + ++ A Sbjct: 85 YSELQALFRADAARQLSAQHDYQDRIRGLIASGNEPRSSARLAHEVIEGSIESLQALQRG 144 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQ 175 E+ V ++ A + L + V A+ L + + ++ Sbjct: 145 LPPEQFEAAVDLMLDAPSLWLAASRRAFPVGAYLAYALQHTEKPVHWLHGLGAMQKGELR 204 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 A +P D++LA+S+ E D L G ++LA+T + L RA+ L Sbjct: 205 ALAPGDVMLAVSFEPYAPETLEVVDAALARGARLLALTDSQLSPLASRATVTLLAQDAAT 264 Query: 236 ATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 + + L LF+AL + ++ S Sbjct: 265 F----GFRSLTSTLTLAQSLFLALAYRMELAYEPSVKRS 299 >UniRef50_A5I3B9 Phosphosugar-binding transcriptional regulator n=11 Tax=Clostridium RepID=A5I3B9_CLOBH Length = 245 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 107/259 (41%), Gaps = 17/259 (6%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + + + L +++K + Y+ ++S +A ++ S ++V + +K G +G Sbjct: 2 VIEVNKSIFDSLTETEKTVVKYINSNESNIPNMSIVDVAEKSFTSPATVSRTIKKCGLEG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F L+ +S +S +++ ++ + T+ S E L Sbjct: 62 FSELRYKISAKNDYNHDSKK----------------VNEILGKSLIEVTKTIENISVENL 105 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V +++ A+RI + G + LVAQ F KL +G+N + D + + + ++L Sbjct: 106 LKTVRLIKEAKRIYILARGLTELVAQEFNLKLELLGYNTFLIVDPNIMRKICKTLDKEEL 165 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE-QATNSAS 241 ++ S E+ +A+ ++ G K++ + L+ + L + A Sbjct: 166 VIVFSLKIGSPEIVESAESAVKTGAKLITCCCVKNSKLENLSDITLIGYKQSRTAIKEFE 225 Query: 242 ISACHAQGMLTDLLFIALI 260 +++ +++ + LI Sbjct: 226 VTSRLPLFIISRAIIDYLI 244 >UniRef50_A5IZ72 Transcriptional regulator n=1 Tax=Mycoplasma agalactiae PG2 RepID=A5IZ72_MYCAP Length = 288 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 48/268 (17%), Positives = 113/268 (42%), Gaps = 6/268 (2%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 L +S+K + D++ + +LS +LA A S+++V +F +K +K + +++ Sbjct: 17 LTKSEKNILDFINSFEQSEFNLSQAELAKLANSSEAAVSRFVRKYHFKDYRNFIASINIK 76 Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR 133 L++ + N + + A+ + E + ++ ++R Sbjct: 77 LSNFQRMYPIKYDNGQEPN-----PFSVIYSSYKYAIENINEESVTENCIKAAELINNSR 131 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRR 193 +++ G G+S + + L+KIG + D H + + +D L+ S Sbjct: 132 NVLIYGSGSSQRRSLDLVANLIKIGKSVVYNSDFHIFFPALANADSNDTLIVFSNNLKST 191 Query: 194 ELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTD 253 E + + G K++AIT N + + + + T +S+ +Q ++ + Sbjct: 192 ESHFVISNAHKNGLKIIAITSKNDNKINKNLDVIIQYQKIQNDTLLVPVSSRVSQMLIGN 251 Query: 254 LLFIALIQQDLELAPERIRHSEALVKKL 281 +LF A+I + + +++ S AL+ + Sbjct: 252 ILFEAIIYNN-DENYNKLKKSSALIDEW 278 >UniRef50_A8GCW7 Transcriptional regulator, RpiR family n=1 Tax=Serratia proteamaculans 568 RepID=A8GCW7_SERP5 Length = 380 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 49/230 (21%), Positives = 99/230 (43%), Gaps = 6/230 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + +IR R L+Q + K+A +L A + + LA++AGVS +++ +FA+ +G Sbjct: 126 DIVYQIRARQNQLSQQEAKVAQTILDDIAFASSATIELLASQAGVSPATITRFAKTIGCD 185 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 L++ L++A S S + Q + P RL +++ + ++ L Sbjct: 186 DIRDLRMKLAQA----SVSGSRYLTAQTTPNGPPRLWLQRV-NDVETTLHQQLQQVEHSA 240 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + + + + + G+ + GL +L+ +G+ A A +D + T S Sbjct: 241 LIDASQQVSQCKSVHIFGVNSMGLYVNELQQRLVGLGYPAFACQDAALMRMTASTLSTQQ 300 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI 231 ++ +S +G +L AA G +A+ + L A L Sbjct: 301 CVILLSLSGENTDLLNAARLAGATGAYRIAL-APAGSTLASLADKVLPLS 349 Score = 65.4 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 30/66 (45%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + I+ R + + K+A +L P + +QLA AGVS V FAQ LG Sbjct: 1 MDLVYHIQFRQDPFNRQEAKIARTILDNPGFTSTATIEQLAERAGVSTEIVAHFAQSLGC 60 Query: 61 KGFPAL 66 + Sbjct: 61 QDLNDF 66 >UniRef50_B6R4H6 Transcriptional regulator, RpiR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R4H6_9RHOB Length = 283 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 48/260 (18%), Positives = 102/260 (39%), Gaps = 6/260 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + RI + + + + A Y L PD ++ ++A+ AGV S++V+FAQ LG+ Sbjct: 18 SLKARISTLSESMPKRLLQCARYALANPDRIALGTTAEIASAAGVQPSTLVRFAQTLGFD 77 Query: 62 GFPALKLALSEALASQPESPSVPIHN-QIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF ++ L + + + + G + + ++ + ++ L Sbjct: 78 GFSQMQQIFQGQLVGRSSEYTERLTKIRESGTNTPGSILGNFVERSKQSLDDLLRQVDTV 137 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLAT-VQASSP 179 L + L +A I L G+ + V + L K+G + +L VQ + Sbjct: 138 ALERTIEALSAAENIHLLGLRRAYPVVSYLHYTLGKMGVRTNLLEYTGGILEERVQFINE 197 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +D L +++ E+ A + G V+++T + + + +S L E Sbjct: 198 NDALFVATFSPYSPEVVEFASKAFGRGVAVVSLTDSVLSPIARVSSTVLEVNEAEH---- 253 Query: 240 ASISACHAQGMLTDLLFIAL 259 + + L + +A+ Sbjct: 254 GAFRSLSTTMCLATSIAVAV 273 >UniRef50_A6X7I1 Transcriptional regulator, RpiR family n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X7I1_OCHA4 Length = 293 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 98/279 (35%), Gaps = 7/279 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M R+ +++ K+ LL A + LA AGVS +VV+FA KLGY Sbjct: 1 MAIRDRLTDGEIDFTRAELKIVRQLLSNYPAAGLNTVAHLAAAAGVSNPTVVRFANKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+P + AL + + SP + + + + ++ + A+ +++ + + Sbjct: 61 DGYPEFQTALLGEVQERMSSPLSMLDTR-KPSLEQENFYQYFLRASIHALESSMQMLPPD 119 Query: 121 KLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQASS 178 + R+ G SG +A + ++ + + + Sbjct: 120 DFEAAIDAAADLNMRVHCLGGRFSGFLAGLLWSHMKQLRGETRWINGTQADQVDWLVDLG 179 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D+L Y + + A + + G +++ T + + + AS L + Sbjct: 180 KRDVLFVYDYRRYQIDTIRFARQAAKQGARIVLFTDRWVSPIAEFASVTLTAAVDTV--- 236 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + T+ L L + + RI E L Sbjct: 237 -SPYDTMVPAIAQTEALIAGLTARLANQSRGRIERMEEL 274 >UniRef50_UPI000196AB39 hypothetical protein CATMIT_01159 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196AB39 Length = 243 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 47/248 (18%), Positives = 99/248 (39%), Gaps = 21/248 (8%) Query: 8 RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALK 67 ++ + + +D ++ +Y+L ++S ++LA+E S +S+++F +K+GY FP LK Sbjct: 4 EEKIKSFSTTDMRIYNYILKHSIQFPYMSIRELADEIPTSTASIMRFVKKMGYDSFPELK 63 Query: 68 LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 A + + I +K + E Sbjct: 64 YAYKKEEKEVSLYMVNDLDETI-------DCLKKFNTPYYQDL-----------FKEIAY 105 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAIS 187 +L A II G+G S +A+ A + GF +AA+ D + + + +++ +S Sbjct: 106 ILGDANMIIFDGMGDSAKIAEYAARRFSSNGFFSAALTDPYQ---KISMDGTNIVVVMLS 162 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHA 247 +G EL A+ G ++ IT N L + + + + + +S + Sbjct: 163 ISGDTVELFRKANAYKAAGSTLITITASDDNTLAKMSDYHISYYINDVRNELSSHTTQVP 222 Query: 248 QGMLTDLL 255 + ++L Sbjct: 223 ALSIIEIL 230 >UniRef50_Q4KEH9 Transcriptional regulator, putative n=8 Tax=Pseudomonas RepID=Q4KEH9_PSEF5 Length = 284 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 93/278 (33%), Gaps = 9/278 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + I L S++K+ LL +LA AGVS ++V+ +KLG+ Sbjct: 3 SLRDLITDPALDLTPSERKVVRALLDHYPRNGLGPMSRLAEHAGVSDPTIVRLVKKLGFS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + AL + + SPS + + + + + ++ + T + E Sbjct: 63 GYGEFQEALLSDMDDRLRSPSTLLRPRSQVA--QGDTWGRYLADSQRVLQDTQALTQPED 120 Query: 122 LHECVTMLRSARR-IILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + L +R + G S +A L + + D L + Sbjct: 121 IRVLMDWLLDSRHSVYCFGGRFSSFLALYLFNHLRLMRPGCFFLDDNAQLPDRLFDVQRQ 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL+L Y + + A + +V+ T + L++ A + E + Sbjct: 181 DLVLLFDYRRYQSQAMRVASAVKARNARVVLFTDIYASPLRELADLVISAPVES----LS 236 Query: 241 SISACHAQGMLTDLLFIALIQQ--DLELAPERIRHSEA 276 + L L + L+ E I A Sbjct: 237 PFDTLVPALAQVEALVACLTPRSPHLDQRLEGIDALRA 274 >UniRef50_C1IAA4 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IAA4_9CLOT Length = 245 Score = 167 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 108/259 (41%), Gaps = 17/259 (6%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ R + ++KK+ +Y+L + ++ + +AN+ +S +++++ +KLGY Sbjct: 1 MSFYERFSNENIHINNTEKKIIEYILERANSFSKIKLTDIANDLFLSSNTIIRLCKKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK + + + H I ++ TL++N +E Sbjct: 61 SGFSELKYDIINNNYEKVSDSNEHSHITI-----------------QNSILQTLSLNKKE 103 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 EC T+++ + ++I+ +G S A +FA KL D A Sbjct: 104 TFKECATLIKDSNKVIIFSLGLSQYPALSFAKKLQYFNKICLVPEDRDATTLFANNLKDG 163 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL + +S +G + + + +++ITGF+ N + + LY ++ + Sbjct: 164 DLAIIVSSSGNTDIMRKISSIITTKNVSIISITGFSQNIVSHFSDISLYAYLKDYNIDGH 223 Query: 241 SISACHAQGMLTDLLFIAL 259 +++ ++ DLLF Sbjct: 224 DLTSRIGFNIIFDLLFEEY 242 >UniRef50_B0NEG5 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NEG5_EUBSP Length = 287 Score = 167 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 55/285 (19%), Positives = 119/285 (41%), Gaps = 19/285 (6%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + RI Y+ L ++ K++A YL + + A +S++ L+ + VS+++V + A LGY Sbjct: 15 SLCERIDLVYEKLTEAQKQIAIYLKKKWEQACLMSAKSLSEQVDVSEATVHRLAASLGYD 74 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F +K + E L ++ N+ ++ L ++ + T +N ++K Sbjct: 75 SFTDMKEKMKEELLMNRAVTNMSFRNRGISENWLDE----CLQTEMVNLVNTYQLNLKDK 130 Query: 122 LHECVTMLRSARRIILT----GIGASGLVAQNFAWKLMKIGFNAAA-VRDMHALLATVQA 176 + + MLR++RRI + G+G S + + L G + D++ + Sbjct: 131 ISQGAEMLRNSRRIYVIGDKQGLGTSSYLGFVLNYLL---GNTVHLTLADVYEQ---IGF 184 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 +D+L+ I + A + ++LA T + Q+A LY + Sbjct: 185 MGSEDVLIVIGFQRYCPRTQKAVELAADRNVRILAFTDCNLSPFAQKAEISLYATMDSTY 244 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + A + L ++ +D E + + +E + ++ Sbjct: 245 F----LDSYTAVVSIAQALIARIVMKDEERIRKNVEATEYVYRRF 285 >UniRef50_Q1GCU6 Transcriptional regulator, RpiR family n=2 Tax=Ruegeria RepID=Q1GCU6_SILST Length = 285 Score = 167 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 106/279 (37%), Gaps = 6/279 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +++ R L +++++L+ +L S +LA A VS +V + QKLG+ G Sbjct: 4 IAEKLKSRESDLTRAERQLSAAILDNYPIPGLGSITELAELAEVSTPTVARMVQKLGFSG 63 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 +P + AL E L +P V + + P + + + ATL + E+ Sbjct: 64 YPEFQHALREELREIISNP-VEKRAEQAPELPEGHMLNRYAVAVYDNIRATLENVNLEEF 122 Query: 123 HECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 +L R+ + G SG +AQNF L I + + + +V P D Sbjct: 123 DTLCALLADTNSRVHIAGGRLSGTLAQNFYLHLQMIRRDVFMIPPRASWTHSVLDLLPGD 182 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L+ L A+ G KV+ T + +Q+ A+ + ++ Sbjct: 183 TLILFDIRRYENATLLLAEMAHERGVKVVLFTDQWRSPIQKEATFTFAA----RIAVPSA 238 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + A +L + + + + + R EA + Sbjct: 239 WDSGVALLLLIESMIAKIQEDHWDTVKARNDELEAAFDR 277 >UniRef50_UPI0001788C32 transcriptional regulator, RpiR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C32 Length = 280 Score = 167 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 53/262 (20%), Positives = 116/262 (44%), Gaps = 9/262 (3%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 GL+ S K+AD++ P+ ++ Q++A+ G S ++V +F + +G++ A KL L Sbjct: 9 SGLSPSQLKIADFIERNPEEMLFMTEQEIADRLGTSIATVSRFWRAVGHENAKAFKLMLR 68 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 E+ +P+V + I D + K++++ + T+ N ++L E ++ S Sbjct: 69 ES---SDTTPAVKLEKTISRLD-ASSLPAKMLEQAKHHLQDTMEKNRPDELEEAAGLMAS 124 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASSPDDLLLAISYTG 190 ARR+ + G S + + +++L + G + + H LL ++ +D++L S+T Sbjct: 125 ARRVYVHAPGPSLSLGELLSYRLSRFGMSVRIMAGSGHELLESLAHMEREDVVLIFSFTR 184 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGM 250 + E + D + RV + IT A + + + + Sbjct: 185 MLPETEVILDCVSRVQNAAIMITDREEFRYGTPAQISFFVS----RGDMGEFHSMVTPLL 240 Query: 251 LTDLLFIALIQQDLELAPERIR 272 L + L +++ + E ++ Sbjct: 241 LIEQLILSMGMLNKEKVLSKLD 262 >UniRef50_A4JTS2 Transcriptional regulator, RpiR family n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JTS2_BURVG Length = 285 Score = 167 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 55/275 (20%), Positives = 101/275 (36%), Gaps = 9/275 (3%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 R+R+ L+ +++KLA LL A + Q A A VS +V++ KLG+ +P Sbjct: 10 DRLRRMLDSLSPAERKLARVLLGNYPVAGLETIAQFAQRAEVSGPTVLRLTTKLGFATYP 69 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 + AL + L + +SP + + + + K+ + TLN Sbjct: 70 DFQQALRDELEDRLQSPILAQRDVLTDSNDP---LVKMSDALVQNLRETLNDLPRATFDS 126 Query: 125 CVTMLRSARR-IILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASSPDDL 182 V++L RR I L G +A +L + N + T+ D+ Sbjct: 127 VVSLLADPRRSIYLLGGRFGYALAVYLRTRLHMLRKNVHLIGGQSSTWPETLVDMGSKDV 186 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L+ +R++ + G +V+ T + + A+H L E + Sbjct: 187 LVVFDARRYQRDIEEFSSAAAARGIQVVLFTDQWLSPIVNVAAHTLIMRVEMPTRWDTA- 245 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 L + L + + + A R+ E L Sbjct: 246 ---VPTLALLEFLLATITDRHWQEARSRLERLETL 277 >UniRef50_A3X377 SIS domain protein n=5 Tax=Rhodobacteraceae RepID=A3X377_9RHOB Length = 298 Score = 167 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 108/283 (38%), Gaps = 9/283 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L R+ + ++ L +K A Y+L P+ + +++A A V ++ V+ A+++G++G Sbjct: 13 VLDRLTEEWEALTPEAQKAARYVLENPNDVGVSTVREIAEAASVKPNTFVRMARQVGFEG 72 Query: 63 FPALKLALSEALASQPESPSVPIH--NQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + + +A+ S IR L + + + + T + E Sbjct: 73 YDDFRAPFRDAIRQGTASFPDRARWLQDIRKSGDLGGLYADMAEAAIRNLEDTFSGIDAE 132 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF-NAAAVRDMH-ALLATVQASS 178 + + +R++ G+G + A+NF + L G A+ + + + Sbjct: 133 AMKLAAEAIWGSRQVFTLGVGVNNANARNFTY-LASTGMTQFHAIPRPGSTAVDDLAWAD 191 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D+L+A+S R E+ A + G ++ ++ + + + A H + Sbjct: 192 NRDVLIAMSMRPYRSEVIAALEVAREQGMTIIGLSDSPASPIIRAADHGFVVAVDTPQF- 250 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + L + L +I E ER+ KL Sbjct: 251 ---FPSSVSAIALLETLLSFVIAVASEEIVERVEKFHQRRHKL 290 >UniRef50_A8TQ66 Transcriptional regulator n=1 Tax=alpha proteobacterium BAL199 RepID=A8TQ66_9PROT Length = 288 Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 101/258 (39%), Gaps = 7/258 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + +++ RY GL+ ++LA L P++ + +LA A V S++++FA++ GY Sbjct: 14 SLRHQVQARYDGLSPHLQRLARLALEDPNSFALETVTRLAQVAEVQPSTLIRFAKEFGYS 73 Query: 62 GFPALKLALSEALASQPESPSVPIHN-----QIRGDDPLRLVGEKLIKENTAAMYATLNV 116 GF ++ L + I+ + + + E+ + + + Sbjct: 74 GFSDMQKVFKLRLIEGAPAYREQIYQHRQRLEATAESDPMAILEEFTDASILCLERLKDT 133 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL-ATVQ 175 S E L + + M+ +A I + G + +A A+ L ++ + + ++ Sbjct: 134 VSPESLAKAIEMMAAAEHIYVIGQRRAFPIAAYLAYGLARLEHRTQLLDFVGGMVPQQAA 193 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT-IAEE 234 P DLL+A+++ + ++ L IT + L Q + A+ Sbjct: 194 TLRPTDLLIAVAFAEYTPAVVEVVRDVHIRNIPTLTITDVPTSPLAQHGTVYFCVDDADI 253 Query: 235 QATNSASISACHAQGMLT 252 S S AQ ++ Sbjct: 254 HRFRPISGSMSLAQSLII 271 >UniRef50_Q02WG9 Transcriptional regulator n=6 Tax=Lactococcus RepID=Q02WG9_LACLS Length = 250 Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats. Identities = 48/264 (18%), Positives = 95/264 (35%), Gaps = 16/264 (6%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 L ++ + + LS +LA A VS S+V + +K G++G+ + ++ Sbjct: 1 MSNLTNAESYTWQIIQENYEKIPQLSISELAELAHVSLSTVNRTVRKKGFEGYGEFRYSI 60 Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 E + S + I N + T+ S E++ + V +++ Sbjct: 61 REKKLPEINGFSKEVLGAIAK--------------NQEELLKTIENISAEEIEKAVELIQ 106 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 + I++ G S VA KL + D + Q + L++ +S +G Sbjct: 107 ESEEILIFSRGLSTNVADELMKKLQLFRKRVSLHDDSKYMAYYAQFVNEKSLIIVLSLSG 166 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL--YTIAEEQATNSASISACHAQ 248 E+ A K+L++T L + L Y + E + + + Sbjct: 167 ETVEILNALRIAKAQNPKILSLTVNANTNLTNLSDISLIGYKSSLEVNYFDLDVHSRLSL 226 Query: 249 GMLTDLLFIALIQQDLELAPERIR 272 +L+ +L A L+ IR Sbjct: 227 SILSRVLIDAYSIYTLKQGRSDIR 250 >UniRef50_C6VQQ2 Transcription regulator n=4 Tax=Firmicutes RepID=C6VQQ2_LACPJ Length = 237 Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats. Identities = 51/252 (20%), Positives = 103/252 (40%), Gaps = 20/252 (7%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 ++ + ++D ++ Y++ D ++S ++LA+E VS S++++F K G++G+ K Sbjct: 5 EQLEKYNETDVEIYRYVINNMDRVGYMSIRELAHELHVSTSTILRFCLKNGFEGYRDFKR 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 AL + + K N++A KL +T Sbjct: 65 ALKSEQQQLTTY---------EPKSDVSELAHFFAKTNSSAYER--------KLMPALTY 107 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 LR A +I GIG+SG +++ A G A + D + + + D ++ A+S Sbjct: 108 LRRATLVIFVGIGSSGSLSRYAARCFTNAGKVAFGLEDSNYPVNAFEI--HDTVVFALSE 165 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSASISACHA 247 +G EL + VL+IT + + L + + A ++ + +I+ Sbjct: 166 SGETPELIALVQYFQQRRCAVLSITNQSQSTLAKLSDWNFSYQLAHQRINGNYNITTQVP 225 Query: 248 QGMLTDLLFIAL 259 + + L L Sbjct: 226 VVYVIETLAKRL 237 >UniRef50_UPI0001BC4077 transcriptional regulator n=1 Tax=Fusobacterium sp. 3_1_5R RepID=UPI0001BC4077 Length = 275 Score = 166 bits (422), Expect = 7e-40, Method: Composition-based stats. Identities = 40/280 (14%), Positives = 113/280 (40%), Gaps = 11/280 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +I++ L +++K++A + L + ++S+++A +S +S+++F + +G+ Sbjct: 4 LYEKIKEA--KLTKTEKRIAQFFLESEEDIFFMTSKEIAELLQISDTSIIRFVKHIGFTN 61 Query: 63 FPALKLALSEALASQPESPSVPIHN-QIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F + + L ++ S I N + + + + +N + ++ T ++ K Sbjct: 62 FTDFRDFIKNNLQTKMASLPQFIQNMEELKHNSVEQALLSQMNKNISTLFDTKSL---AK 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKL-MKIGFNAAAVRDMHALLATVQASSPD 180 + E + +L A + G+ ++ +A +L +G V + L +++ + Sbjct: 119 MEEIIDVLWEAENRYIVGLKSTVGLANFLGIRLSFMLGKVYTFVSNDTILFNSIRNIKKE 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L Y RE+ L + G K++ ++ + A + + Sbjct: 179 DVLFLFDYPTYSREMILLCRVAKKRGAKIILVSDMINSPCSMYADIHFTIKIKGISL--- 235 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + + L A+ ++ + + + L+ + Sbjct: 236 -FHSLISSQFFVEYLLSAISKKMTKDQKKEFLVWKKLLSE 274 >UniRef50_B1HYT1 Transcriptional regulator n=2 Tax=Bacillaceae RepID=B1HYT1_LYSSC Length = 291 Score = 166 bits (421), Expect = 8e-40, Method: Composition-based stats. Identities = 42/279 (15%), Positives = 116/279 (41%), Gaps = 9/279 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ I++R+ L++ +K+A +++ P+T + ++ A VS+S+V++F + Sbjct: 4 MSIREDIKKRFVRLSKGQRKVAQFVMDNPNTVIANGAAEVGRLANVSESTVIRFCYAMDL 63 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ L+ + + SQ + + + G+ + K+++ ++ + T+ + +++ Sbjct: 64 SGYVELQEEIRGYIMSQDVGTN--LQSTYTGNKLVNSSFGKVMQRDSRNIQETIQLINDQ 121 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSP 179 ++ + A I + G + +A + L + N +R D ++ + Sbjct: 122 QIQTSSKWMHEAENIYILGTREAVSIANWLSNTLKTLRSNIKQLRIDSDEIMNQINNMGE 181 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 L+ +S+ +++ + K++AITG + +++ A+ + ++ Sbjct: 182 RTTLIVLSFDQQLKDIQTIVEIAKMKKVKIIAITGTAFSPVREYANILFALGTNKHSSLD 241 Query: 240 ASISACHAQGM-LTDLLFIALIQQDLELAPERIRHSEAL 277 L +I QD + + +E + Sbjct: 242 I-----VPVLFSFLHALLEEMINQDKGQYEKYQKSNEQV 275 >UniRef50_Q5WG85 Transcriptional regulator n=3 Tax=Bacteria RepID=Q5WG85_BACSK Length = 245 Score = 166 bits (421), Expect = 8e-40, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 114/255 (44%), Gaps = 14/255 (5%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I + Y+ L S+K++ Y++ D H+ LA VS++ ++ AQKL + GF + Sbjct: 4 ILKNYEELTVSEKRVLSYIMENQDQIPHIKINDLAEATFVSKTVIINLAQKLDFSGFREM 63 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 K +S+ + + + ++ +++K +M T ++ +EE+L + Sbjct: 64 KYYISQRIIEKM-----------SAQETSTVLYREILK---QSMDKTFSLVTEEQLQKTA 109 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 +++A+ + + G S V L+ IG ++D + + +D+++ I Sbjct: 110 AKIKAAKNVFIMARGTSKAVGYYLEHLLLTIGIQCIFIKDYNLSEVFTDFVAEEDIVIFI 169 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S +G +++ A ++ ++++IT F N L + ++ L+ ++ T+ + Sbjct: 170 SLSGDTKKIINTAKKIHLKKAEIISITSFKTNELTRYTTNNLFCYTDKTNTSKNDTISRT 229 Query: 247 AQGMLTDLLFIALIQ 261 + DLL L Sbjct: 230 GFFLTIDLLVDKLAN 244 >UniRef50_C3RJQ3 Predicted protein n=2 Tax=Bacteria RepID=C3RJQ3_9MOLU Length = 258 Score = 166 bits (421), Expect = 8e-40, Method: Composition-based stats. Identities = 52/263 (19%), Positives = 105/263 (39%), Gaps = 9/263 (3%) Query: 7 IRQRYQG--LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 IR+ L + ++ +++YL +PD ++++LA VS ++++F QKLG+KG+ Sbjct: 2 IRELIDSIKLTKKEQVISEYLEQEPDCVLQYNAKELAALIKVSAPTLIRFVQKLGFKGYS 61 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 ++ ++ + +I +R V E L T + E Sbjct: 62 DFQVTYTQE----KTMYDQMKNIRIDSKSSIRDVIETLPAIYDHVFKETRKLTRFESFVR 117 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD-LL 183 + + A++I + Q+ KL IG A ++ P D L Sbjct: 118 TINYMLQAKQIDFYANDNNYSEVQSACLKLNTIGIKAQCFNTLNTAYID--NIDPRDILA 175 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 +S++G + + AA E+ + +V+AITG L+ + LY + + Sbjct: 176 FVVSHSGKNQTMVDAAYELRKKRIRVIAITGKIDPTLELVCNEALYIDSSSHHLPHHIML 235 Query: 244 ACHAQGMLTDLLFIALIQQDLEL 266 + + D+L +L + + Sbjct: 236 YGLSIHYILDILVTSLYYKKYKE 258 >UniRef50_A6LTH7 Transcriptional regulator, RpiR family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LTH7_CLOB8 Length = 252 Score = 166 bits (421), Expect = 9e-40, Method: Composition-based stats. Identities = 45/265 (16%), Positives = 108/265 (40%), Gaps = 13/265 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + ++ + + ++ + L+ P + + LA + VS S++ +F +KLGY Sbjct: 1 MDPISLMKSMASTFTKVELEIYNRLMSDPTLIMNSTIVVLAEDLNVSNSAITRFCKKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG+ + S + +D + + + + + + SE+ Sbjct: 61 KGYVEFRYDFS-------------CYFNKEEEDNEDHIVNRTVTTYLSVLNILEKMISED 107 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ + V+ ++ + I + GIG SGL+A+ +++ K N A+ + + + + Sbjct: 108 EIRKLVSKMKKSNNIRVIGIGESGLIAKYLRYRIFKYKRNIEALDNKFEIDESCSLAEEG 167 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L+AI+ +G +E+N E G + IT L+ ++ + Q Sbjct: 168 DMLIAITNSGKSKEINRQIVEAYNNGITTVVITTNDIAVLRSKSHFYFQMPSAGQFYKPG 227 Query: 241 SISACHAQGMLTDLLFIALIQQDLE 265 + + +++ + E Sbjct: 228 AYDNQPIIIIFLEMIVNLFAFFNEE 252 >UniRef50_Q14LR0 Hypothetical transcriptional regulator with helix-turn-helix domain transcription regulator protein n=1 Tax=Spiroplasma citri RepID=Q14LR0_SPICI Length = 283 Score = 165 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 117/279 (41%), Gaps = 9/279 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L + L ++ + + P + +LA VS+S++ + A+ LG+K Sbjct: 1 MLSLLTYDKNTLTDTEISVIKQIFQNPLLFTSKTITELAKTYYVSESTITRMAKHLGFKN 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 L++ + E L + + + L+ + + + +++ T++ E L Sbjct: 61 IKELQMHIYERLNFLNK------NYETNETMNLKDIANNMRVYYSYSIHETIDNIDLEVL 114 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + +RI GIGAS L + L IG+N ++H+L+ T+ + DDL Sbjct: 115 DRLINDIVLKKRIFAFGIGASFLACRVLHSNLNMIGYNCYTTENIHSLMVTLSNAEADDL 174 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTP-NALQQRASHCLYTIAEEQATNSAS 241 ++ S +G E+ + ++ V +T + L + L+ + ++ + Sbjct: 175 IIIFSKSGKTNEVVNIINLANKLNIDVALVTNNPNIDELYKIKHKILFEVHTKENERFPA 234 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +S+ Q +++D++F +L++ E + + + Sbjct: 235 LSSKIVQILISDIIFRSLLKIHP--NLENKIKAANAITE 271 >UniRef50_B0MFI6 Putative uncharacterized protein n=2 Tax=Anaerostipes caccae DSM 14662 RepID=B0MFI6_9FIRM Length = 245 Score = 165 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 105/259 (40%), Gaps = 18/259 (6%) Query: 3 GLLRIRQ-RYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 ++R+ + +++ L ++K + Y+ + S ++A E+ S ++V + +K G+ Sbjct: 1 MIIRLEEDQWKTLTDAEKSVITYINNNEELIPEKSISEMAEESYTSPATVSRTIRKSGFD 60 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G L+ +S E ++ + +++ T+ Sbjct: 61 GISELRYRISARNEFNQE----------------AMIVNAIFQKSMLECQKTIENLKVPT 104 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + E V ++ A++I L GA+ LVA+ F +L +G+N +RD + + DD Sbjct: 105 ILEVVKRIKRAKKIYLLARGATVLVAEEFEMQLQLLGYNVWIMRDSEHMKRSNLIFKEDD 164 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRAS-HCLYTIAEEQATNSA 240 L++ + EL +AA V++ T + L Q + + + + A Sbjct: 165 LVIIFTVKNSTPELGMAAKFAKENKAYVVSCTCLPRSELNQYSDVYVVGYTKYDYAIKEF 224 Query: 241 SISACHAQGMLTDLLFIAL 259 +++ +++ + L Sbjct: 225 LVTSRLPLQIISRTIIEYL 243 >UniRef50_C5EIL0 RpiR-family transcriptional regulator n=3 Tax=Clostridiales RepID=C5EIL0_9FIRM Length = 251 Score = 165 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 91/261 (34%), Gaps = 21/261 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M R + Y ++++ + YLL D+ LS + A VS+S +V+FA+K G Sbjct: 1 MGLEERFNENYHRFTENEQYICRYLLEHKDSCIRLSITEFAGMCHVSESMLVRFAKKNGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ LK Q D + ++L++ + ++ Sbjct: 61 SGYGELKARFRLE---QDTGDRREGELLDLVTDSYHKMMDELMRRDMTSL---------- 107 Query: 121 KLHECVTMLRSARRIILTGIGASGL-VAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 L ARR+ L G G++ A + + + A + + Sbjct: 108 -----FEKLHRARRVFLYGSGSAQTRAASEMKRIFLPV-KEMFHINGHDMRGALSRVVTA 161 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+ + IS +G A+E+ +L+IT N L LY + + Sbjct: 162 KDMAVIISLSGESGATVGLAEELRLRQVPMLSITRMGNNTLASVCDENLYIHSITLPASY 221 Query: 240 A-SISACHAQGMLTDLLFIAL 259 +L + L++A Sbjct: 222 GIEYEISTPYFILIEYLYLAY 242 >UniRef50_A6UBD6 Transcriptional regulator, RpiR family n=16 Tax=Proteobacteria RepID=A6UBD6_SINMW Length = 292 Score = 165 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 49/277 (17%), Positives = 101/277 (36%), Gaps = 7/277 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I + L +++++LA+ LL + S +A AGVS +V + QKLG+ Sbjct: 8 MTVSDVINAHFAALTRAERQLAETLLDNYPVSGLGSITTVAENAGVSTPTVARMVQKLGF 67 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GFP + L + L + +P H++ P + M TL+ Sbjct: 68 RGFPDFQARLHQELEATISNPIAK-HDRWAASAPGTHTLNRFADAVMGNMRQTLSQIEPA 126 Query: 121 KLHECVTMLRS-ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASS 178 + ++ R++ L G + +A L I + + + V Sbjct: 127 EFDTAAALVADLKRKVYLVGGRITRSLADYLFTHLQVIRTGVTQIAANPSSWPHYVLDMR 186 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D+L+ +E+ A G +++ T + + + +S E Sbjct: 187 QGDVLILFDIRRYEQEMETLARFARDRGVEIVLFTDQWGSPVAKSSSKVFRARIEVP--- 243 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 ++ + L + L A+ + + +R++ E Sbjct: 244 -SAWDSSVMLLFLVEALIEAVQSSNWDQTRDRMKTLE 279 >UniRef50_C6VKP3 Transcription regulator n=3 Tax=Lactobacillus plantarum RepID=C6VKP3_LACPJ Length = 248 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 48/264 (18%), Positives = 109/264 (41%), Gaps = 26/264 (9%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 L+ D + +++ + ++ ++LA A VS SSV++F +K+GY FP K++L Sbjct: 9 IDKLSGVDLAIYRFIVEHDEQIPYMRVRELARGAHVSNSSVMRFIRKIGYDSFPEFKVSL 68 Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 + + P P ++ + + + ++ Sbjct: 69 RSE--TPIQKPDAPGIQFVQPSAFPADI--------------------TKIIRLAAQLMV 106 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 +A I+ GIGAS + + + + +GFN+ V+D L ++ +++L+A+S +G Sbjct: 107 NADNIVFVGIGASAALGEYASRQTSSLGFNSYVVKDPFYPLLPQLRNTSNNVLVAVSVSG 166 Query: 191 VRRELNLAADEMLRV-GGKVLAITGFTPNALQQRASHCLYT-IAEEQATNSASISACHAQ 248 EL ++ + +++IT + + + + + L EE+ +++ Sbjct: 167 QTSELVEMLNDFVNNPEVNIISITSNLESTIARMSRYALTYRATEERIHQYYDLTSQVPC 226 Query: 249 GMLTDLLFIALIQQDLELAPERIR 272 + + L L + E+ R Sbjct: 227 LYIIEALLREL--RHQEVVQHRFE 248 >UniRef50_C3W9G1 Predicted protein n=3 Tax=Fusobacterium RepID=C3W9G1_FUSMR Length = 260 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 101/261 (38%), Gaps = 9/261 (3%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L + R + + + +A+++L LS ++LA S S++ +F +++ F Sbjct: 8 LKKCRDNNELFPKIEVIIANFILDNHKIIPDLSIKELAQRCNTSTSTISRFCKRINGSDF 67 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 LK + +I R + E I + AM T N EK+ Sbjct: 68 KTLKEECRIY-------NNFLEEKEIVKPTNQRTLNESYITDLFKAMKETSQANDIEKIK 120 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 + ++ A++I G S ++AQN + K M++G N + + + PDDL+ Sbjct: 121 NAIFWIKEAKKIFFFGTSFSNILAQNISEKFMRLGKNTICPLTISSQNNIITQIKPDDLV 180 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + IS++ ++N + + K + I+ + L + + I Sbjct: 181 VIISFSNNNFQINRIKRILRKKQIKTIYISSKQDSNYNNE--ITLLVSSLNYKEFESPII 238 Query: 244 ACHAQGMLTDLLFIALIQQDL 264 + + + L++ I+ Sbjct: 239 QEFSINYIINYLYLFYIESSY 259 >UniRef50_C6DBI2 Transcriptional regulator, RpiR family n=9 Tax=Enterobacteriaceae RepID=C6DBI2_PECCP Length = 262 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 52/248 (20%), Positives = 98/248 (39%), Gaps = 8/248 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L + Q Q L +++ ++ ++ ++ ++LA + VS +++++ QK+G+ Sbjct: 3 NRLASLMQHGQVLTRAEYRVLAFIAEHSSLIGKITVRELAQKTYVSTATIMRLCQKIGFS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ L P P+ D L + + T S + Sbjct: 63 GYSEFIYHCKTLLTDNPRLSPSPVVTP--DDASLPDAFQHFVDNY----QRTFAYISHQD 116 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 +LR L G G S L A+ A KL +G +A + + + + Sbjct: 117 RATFSAILRQESHFFLYGAGFSHLFAEYLAKKLQVLGKDAFSSGLGDSRGIFLNNAPKYQ 176 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHC--LYTIAEEQATNS 239 + +AIS +G ++ A +G KV+A T + N+L + A LY A A + Sbjct: 177 VFIAISRSGETEQVLDKARIAKNIGMKVIAFTRASLNSLGELADLHFRLYDDAVHYAAEA 236 Query: 240 ASISACHA 247 IS+ + Sbjct: 237 GEISSFES 244 >UniRef50_A9WNR4 Transcriptional regulator, RpiR family n=1 Tax=Renibacterium salmoninarum ATCC 33209 RepID=A9WNR4_RENSM Length = 294 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 56/236 (23%), Positives = 98/236 (41%), Gaps = 9/236 (3%) Query: 27 LQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIH 86 + D LSSQQLA +G S+++VV+ Q LG+ G+ L++ ++ S + P+ Sbjct: 44 ERADQVVELSSQQLAELSGASRATVVRTCQSLGFTGYQQLRVLVARDAGYSTTSRAQPVG 103 Query: 87 NQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLV 146 + + + + A+ A + + + VT L +ARR+I+ G G S + Sbjct: 104 S--------AAIVAESFAQVREAVGAMTALLASADVERAVTELCAARRVIVAGNGLSAAL 155 Query: 147 AQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVG 206 A + A +L G A D + SP D+LL +S +G G Sbjct: 156 AMDTAARLTATGRAAEFQADAIGQQIAARLLSPGDVLLMLSGSGANSTSAKVVQAAQTAG 215 Query: 207 GKVLAITGFTPNALQQRASHCLYTIAEEQATNSA-SISACHAQGMLTDLLFIALIQ 261 V+ IT F + L A L + + +++ Q +L + L A+ Sbjct: 216 AMVIVITAFARSPLAALAQINLIVGMPDLSFRDEVTVTTRIPQTILIEGLIAAIAS 271 >UniRef50_A4EUM4 Putative transcriptional regulator protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EUM4_9RHOB Length = 302 Score = 164 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 52/290 (17%), Positives = 94/290 (32%), Gaps = 24/290 (8%) Query: 1 MNGL----LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQ 56 MN ++ + L ++ K +A Y+L P LS +Q+A AGVS + + A+ Sbjct: 9 MNMYLSVTQSLKAQLPQLPRALKVVATYMLEHPGDIATLSMRQVATNAGVSLPNFARLAK 68 Query: 57 KLGYKGFPALKLALSEALASQPESPSVPIHNQIRG---DDPLRLVGEKLIKENTAAMYAT 113 LG++ + L+ + + S ++ D R K + A Sbjct: 69 ALGFETYSELREVYRKQVQQNDISEYHLRAESLQKSGGDAEARETWGKFRTATMDNLTAV 128 Query: 114 LNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAW-------KLMKIGFNAAAVRD 166 + + +L +R + + G+ AS + + K + + D Sbjct: 129 FDSIDPDYFASVAKVLNDSRTVYIVGMQASASFSAYAHYIGGMASGKFRLVRGDGGVFAD 188 Query: 167 MHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASH 226 V D+++A+S R A KV+AIT + A + Sbjct: 189 P------VADIGEGDVMIAVSQQPCARASIELARIARERTAKVIAITDSPAAPIALEADY 242 Query: 227 CLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 L + +L + L ERI EA Sbjct: 243 VLLGPNRSPLF----FESYVGSTVLIEALIGFFTIGQSSRTVERIERIEA 288 >UniRef50_Q03NG7 Transcriptional regulator n=18 Tax=Bacilli RepID=Q03NG7_LACBA Length = 269 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 44/263 (16%), Positives = 99/263 (37%), Gaps = 11/263 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + L+ +++KL DY++ ++ S +++A+ VS ++ ++F +K+G+ Sbjct: 1 MNFFEIVNAHLSELSPNEQKLFDYVVTNMGQIKNQSIREVASATFVSTATFLRFVKKIGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF + L ++ E+ + D +E + ++ V + Sbjct: 61 SGFSEFTTVIKFTLINRQEAERTTPFVVQQKD---------YREEYLKNIGESIRVIQPD 111 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V L + G S + GF RD + D Sbjct: 112 HLRQVVDRLAQHPDVFFFAKGVSKHAVAYIDYLYTMAGFKTHFPRDHDYRKQALTQVDND 171 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGK--VLAITGFTPNALQQRASHCLYTIAEEQATN 238 L+ ++Y G E+ +++ + +++IT N +Q + Y + N Sbjct: 172 ALVFILTYKGSDGEMLDMMSQLVGRPVRPLLVSITEPDNNTIQNLSDINFYIFTDGVTVN 231 Query: 239 SASISACHAQGMLTDLLFIALIQ 261 IS+ + + +L+ ++ Sbjct: 232 GTDISSRISTISVMELILYQYVE 254 >UniRef50_C4XE43 Putative uncharacterized protein n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XE43_MYCFE Length = 297 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 45/273 (16%), Positives = 115/273 (42%), Gaps = 16/273 (5%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L +S+K++ D++ + S +LA S + V +F +K G+K + +++ Sbjct: 28 ELTKSEKRIRDFINNFEGNYFNFSQNKLAKNTESSDAGVSRFIRKYGFKDYRTFIASINN 87 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 L ++ ++ +D + + + A+ + + + +++ ++ + Sbjct: 88 KLTEFEKTYPTIWNDNEVDND-----YKFIAASHRYAIDNVYDEDLLKDINKAAEIINKS 142 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVR 192 + I + G G+S ++ N L+KIG A D H ++ + +D+++ S Sbjct: 143 KNIYIHGCGSSQRISMNLVSNLLKIGKPVIAHSDFHIFFPSLAHVTENDVVIVYSNNLQT 202 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI----SACHAQ 248 E + ++ + ++ +T + S+++ S+ AQ Sbjct: 203 MEAHFVIEQAKKQKAPIIVLTSSQEE------DKLIAVKLRYHKIQSSTMLVPSSSKIAQ 256 Query: 249 GMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++TDLLF A+++ + E +++ + L+K Sbjct: 257 MLITDLLFEAVLEHNKE-NTSKLKKARILIKNW 288 >UniRef50_A6FUC4 Transcriptional regulator, RpiR family protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FUC4_9RHOB Length = 284 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 49/281 (17%), Positives = 101/281 (35%), Gaps = 6/281 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M R+ + + S+++L + LL S LA+ A VS ++V + QK G+ Sbjct: 1 MTVSDRLLEHRDAMTPSERQLVNTLLDDYPIVGLSSITDLADAASVSTTTVTRMLQKTGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GFP + AL L P + + + P + + ++ +L+ + E Sbjct: 61 EGFPQFQAALRSELKEMISDPIAK-RSVWKHELPDEHILNRYSRQALDNQQRSLDDVNPE 119 Query: 121 KLHECVTMLRSARR-IILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + +L + R + + G + +A L I N V + A + Sbjct: 120 DFDQLCQLLSTPERTVYIAGGRITSALANYLYLHLQMIRPNVRLVSNSGAWPQDLLDVKQ 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+++ A +++ T + + + AS+ + Sbjct: 180 GDVVIVFDVRRYENTTLQMAQMCASKNAQIVLFTDQWRSPIHRIASNTF----SGRIVVP 235 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ +C ML + AL ++ ER EA+ + Sbjct: 236 SAWDSCLPLLMLIECTIAALQERMWTTVKERTDDLEAMFDQ 276 >UniRef50_D1AK32 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AK32_SEBTE Length = 278 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 37/263 (14%), Positives = 106/263 (40%), Gaps = 2/263 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + + + S +A LL +++ + +A + V+ S++ +F +K+GY Sbjct: 10 MSLINILEANLEK-GDSKAVIARVLLRNFYNIPNMTQEHIAKLSFVAPSTIGRFCKKIGY 68 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 K F + ++E + + D + +++ ++Y E Sbjct: 69 KNFIEFRKYVNEYIEKLKMDSMLSDAFYEVADKDVFSFSDEIFSSTMKSLYNAQKSIDIE 128 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + ++ S +I + G+ S ++ ++F + +++ G A + + ++ + Sbjct: 129 TIDKVTDLIISTEKIAVFGLPISQIMGKDFQYHMLRHGKYMEAFTEFKKQVELAESLDEN 188 Query: 181 DLLLAISYT-GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 L + IS T G R+ + + + + + + IT + + Q + + EE Sbjct: 189 SLAIFISKTGGERKFICDILNIVKKCKARTVLITYKQDSYMAQNSDFLINIFYEENGLIP 248 Query: 240 ASISACHAQGMLTDLLFIALIQQ 262 + + + +L+ + +++ Sbjct: 249 RGLISGILYTGVFNLIIMNYLKK 271 >UniRef50_C3RLZ3 Transcriptional regulator n=3 Tax=Bacteria RepID=C3RLZ3_9MOLU Length = 252 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 52/269 (19%), Positives = 92/269 (34%), Gaps = 21/269 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + Y L ++D + Y+L + +S + LA VS +S+++F +KLG Sbjct: 1 MTLDKLVEDNYHQLNENDLYIWQYILHHKRECQRISIKDLARNCNVSHTSILRFTKKLGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GF LK+ L LA +P I DD T+ Sbjct: 61 EGFSELKVHLKWDLAQKPNFKPRII------DDTYHEFI------------ETMERMKNR 102 Query: 121 KLHECVTMLRSARRIILTGIG-ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 L + M+ A R+ + G G +A + AV + + + + Sbjct: 103 DLTNIMEMIEKAERVFVYGTGVVQANMAGELRRVFLYTNKVFHAVGNGTEIDTILNNVTK 162 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +DL + IS +G A + + + I L + + E Sbjct: 163 NDLFIIISLSGDNETAVTLARALRGLHIPRIGIAKVGNTLLSKYCDDMITFRYETFKVGM 222 Query: 240 ASI-SACHAQGMLT-DLLFIALIQQDLEL 266 + I A + D LF+ ++ E Sbjct: 223 SDILYGSTAHFFIISDFLFLRYLEYSQEK 251 >UniRef50_C2HBU5 RpiR family transcriptional regulator n=3 Tax=Enterococcus faecium RepID=C2HBU5_ENTFC Length = 255 Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 91/262 (34%), Gaps = 19/262 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I Q + L++ D+ + +++L P ++L LA VS+SS+++ +KLG+ Sbjct: 1 MELEKLIHQHAEKLSELDRGILNFILSDPSLIQNLKITDLAERLYVSKSSIMRTTKKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ K L + + E + ++ + TL+ Sbjct: 61 SGYSEFKYFLRH----------------VTNKENGLRTKEDIFEKQLEDIQQTLHYMKAV 104 Query: 121 KLHECVTMLRSARRIILTGIGASG-LVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 L + L ++ I G S V F ++ IG + + + + Sbjct: 105 NLKPILQCLDRSKMIYCYATGFSQKKVIDEFYKMMLGIGKRVMVLPNKTEFDMAMPLITL 164 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +D+ + +S +G E+ VL IT N + +++ L Sbjct: 165 EDMAIIVSMSGETHEVKENLTAFELQKIPVLTITAAGDNYFTRHSTYHLNYYCNCFILGK 224 Query: 240 A--SISACHAQGMLTDLLFIAL 259 + + L D L A Sbjct: 225 ENKPFQSLISLSCLADYLVRAY 246 >UniRef50_Q4A725 Transcriptional regulator n=1 Tax=Mycoplasma synoviae 53 RepID=Q4A725_MYCS5 Length = 282 Score = 163 bits (413), Expect = 6e-39, Method: Composition-based stats. Identities = 49/275 (17%), Positives = 109/275 (39%), Gaps = 9/275 (3%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I L S+ K+ +++ + S + LA A VS ++V +F +K G+K F Sbjct: 13 ILLNNSKLINSENKVLEFINGFQGEVFNYSIEDLAKLANVSTATVFRFVRKYGFKNFKEA 72 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 + +++ L E + ++ N + ++ + + Sbjct: 73 IIFINKNLQKLNEKYPLSTSQDNN--------ISTIVAGNKYVLDNLYTNELQKIIEKAA 124 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 ++ +++RI++ G G+S +A+ L K+ N A D H L + ++ +D+ + Sbjct: 125 QIIYNSKRILIHGAGSSKRMAETLVSNLYKVSLNVIAHDDFHLFLPVLGNATTEDVCVLF 184 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S E + +++ IT + L + + + +S+ Sbjct: 185 SDNLNSPEAAFTIKQCREKKVQIILITSKKKSNLITKNDVVILYEKITSKHLNIPLSSKW 244 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +Q ++ DLLF L+ D E++ +S ++ K Sbjct: 245 SQLLIADLLFENLLILDS-NLREKLNNSIQIINKW 278 >UniRef50_B5J441 SIS domain protein n=1 Tax=Octadecabacter antarcticus 307 RepID=B5J441_9RHOB Length = 292 Score = 163 bits (413), Expect = 7e-39, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 110/268 (41%), Gaps = 10/268 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I RY G++++ +++A YL P+ S +A + SS V+FAQ LGY Sbjct: 12 SLIRLIHDRYDGMSKTRQQIAVYLTQNPNDVAVRSVNAIAQNCDIHASSFVRFAQSLGYD 71 Query: 62 GFPALKLALSEALASQPESPSVPIH---NQIRGDD--PLRLVGEKLIKENTAAMYATLNV 116 GF +L+ + LA+ ++ +++ D + ++ + A++ + L+ Sbjct: 72 GFRSLQALFQQRLATAAPGFEARVYALKQELKSRDGLSEADLLRDMVVSDAASVQSLLDE 131 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLAT-VQ 175 L + +L A + L G S V + + L +G + L + Sbjct: 132 IDANDLAKAAEILGDAETVFLLGQLRSAPVVELIRYLLTMVGKKCIMLDPSGGLATHIAR 191 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 P D LLA+S+ E+ +E+ G K++A++ + + L + A L Sbjct: 192 TIGPKDALLAVSFRFYANEVVSIVEEVAAQGRKIVALSDSSLSPLAKSAHVLLAAHEHPG 251 Query: 236 ATNSASISACHAQGMLTDLLFIALIQQD 263 + + A L + +A+ + Sbjct: 252 PLS----RSITAPICLAQAITLAVASRM 275 >UniRef50_C0FQ68 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FQ68_9FIRM Length = 218 Score = 163 bits (413), Expect = 7e-39, Method: Composition-based stats. Identities = 48/216 (22%), Positives = 93/216 (43%), Gaps = 15/216 (6%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + I Y+ ++++ +ADY L D LS++ ++ E VS +S+ +FA+K GY+G Sbjct: 10 IIPTIEANYERYTETERHIADYFLKN-DAIGDLSAEFISTELAVSPASLSRFAKKSGYQG 68 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + + + ++ + + N+ E ++ Sbjct: 69 YREFVYEYRNSYVEKTTVEQEESRL--------------VLDTYQSLLNKVYNLLDEAQI 114 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V LR A+R+ + G G+SGL A+ A + IG + A+RD + +P +L Sbjct: 115 KRIVEKLRMAKRVYVCGRGSSGLAAEEMATRFRWIGIDMVALRDNENIKMQSVFLNPQNL 174 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPN 218 ++ +S +G + E+ R G + IT T + Sbjct: 175 VIGLSLSGTKSEVLYMLARGCRQGADTILITEKTES 210 >UniRef50_C5NW06 Transcriptional regulator, RpiR family n=2 Tax=Firmicutes RepID=C5NW06_9BACL Length = 255 Score = 162 bits (412), Expect = 9e-39, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 108/259 (41%), Gaps = 15/259 (5%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +++ Y L+ S+++ DYL+ Q D + +++ E VS S+V++ +KLGY Sbjct: 2 FFENLKENYDRLSISEQQAIDYLMKQ-DNIELTTLKEIKQEILVSSSTVIRACKKLGYNT 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK L + + + + L ++ + T+++ +++ Sbjct: 61 FIDLKYDLKMSKELAKNNNATSSNFI------------TLKEQLSVEFSRTMSILNQDDF 108 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + +ARRI G G+S +V +F KL I + + +++ + DD+ Sbjct: 109 DIFADKIINARRIFCLGSGSSYMVMSDFNRKLKLINLWSNDYFEHYSIKRIPDICTKDDV 168 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 +L S G +N + G VL+IT + L + + H + + N I Sbjct: 169 ILVFSLGGNTDVINDCVLAAKQNGATVLSITSLANSPLAKMSDHLIKVY--DAPKNRKKI 226 Query: 243 SACHAQGMLTDLLFIALIQ 261 + ++ +LF ++ Sbjct: 227 RSRLMLNVVGIILFETIVN 245 >UniRef50_B2TLN0 Phosphosugar-binding protein n=1 Tax=Clostridium botulinum B str. Eklund 17B RepID=B2TLN0_CLOBB Length = 247 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 49/265 (18%), Positives = 113/265 (42%), Gaps = 19/265 (7%) Query: 1 MN-GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M+ + + L ++K + ++ + A+ LS ++A E VS ++VV+ LG Sbjct: 1 MSTLITYFSDKLNNLTYAEKHIFYFINSDLEKAKKLSLTKMAEENNVSTTTVVRMCTDLG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ LK L + + + I ++ +L+ S Sbjct: 61 LSGYSELKYILKNLNTNSTPN------------------IDNYIGTIKTSINLSLDKLSI 102 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + +++ V ++ A+++I+ +G S + + F+ LM+ ++ + + H + +++S Sbjct: 103 KNINKLVDVIHKAKKVIIVSVGLSKPMGEYFSKLLMQANKSSFYIYESHIIDLLDKSTSH 162 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DDL++ IS +G L A+++ K AI ++L + + T +E+ Sbjct: 163 DDLIIFISNSGNTSTLTTVAEKLCYRNFKTAAIVNTPDSSLSKFVDIAINTHSEKNTLYG 222 Query: 240 ASISACHAQGMLTDLLFIALIQQDL 264 I+ ++ D++F I + Sbjct: 223 YDITPRSTLLIILDIIFAYYINKTK 247 >UniRef50_A3V1X8 Transcriptional regulator, RpiR family n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V1X8_9RHOB Length = 289 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 47/282 (16%), Positives = 104/282 (36%), Gaps = 7/282 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 ++R + +++++LA ++L + + +A +AGVS +VV+F +K+G+ G Sbjct: 7 LEDQLRAAMPTMTRAERQLASHMLGNFPLSVLGTVATIAQDAGVSAPTVVRFVRKIGFSG 66 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 +P + L E + + SP + + + + TL+ Sbjct: 67 YPEFRAQLHEEMGERLASPITKHEKWADRLE-IDHPLNRFALRVIENLRQTLSQQDLRTF 125 Query: 123 HECVTMLR-SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASSPD 180 +L +R + L G + +A+ F L + + + + + S Sbjct: 126 DAVRDLLADKSRSVYLIGGRLTRSIAEYFTTALHVMRSDVTLLSSQPNTWPPALLDMSAG 185 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L+ + A+ +V+ T + A H L T E + Sbjct: 186 DVLVVFDIRRYEPSVQQFAELAHAQQMEVVLFTDQWVSPTAGVARHIL-TSQIEVPSAWD 244 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 +I L + + AL + + ER+ E ++++ Sbjct: 245 TI---VPLIALVESMLSALQDANWQDTRERLERMERFYEEML 283 >UniRef50_A1FB39 Transcriptional regulator (Fragment) n=1 Tax=Vibrio cholerae 2740-80 RepID=A1FB39_VIBCH Length = 170 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 39/176 (22%), Positives = 77/176 (43%), Gaps = 9/176 (5%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 R+R + L++ + +ADY+L ++ + LA S+++VV+ + LGYKG+ Sbjct: 3 RLRSNTEPLSKKLRVVADYVLENAHEVQYQTITDLAFNTKTSEATVVRLCRDLGYKGYSD 62 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 ++AL+ L+ + + E + ++ T + L+ Sbjct: 63 FRMALAVDLSQSANQSQPKMDGD---------ICEVSAQSAVDSLMDTAKLIDRAALNRI 113 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 ++ A+ I G+GAS +V + A++L++IG A D H + S D Sbjct: 114 CELVHGAKFIGCVGVGASSIVGRYLAYRLVRIGKKAIMYEDTHLAAMSAGQSVVGD 169 >UniRef50_A6WWJ9 Transcriptional regulator, RpiR family n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6WWJ9_OCHA4 Length = 297 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 47/292 (16%), Positives = 98/292 (33%), Gaps = 27/292 (9%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN I L + +K+AD++L P + ++LA S +++ +F + LG Sbjct: 1 MNLSTLIGSCRGSLTSNQQKIADFVLANPFAVATMGIEELAQATSTSSATITRFVRALGL 60 Query: 61 KGFPALK-LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 F + LA+ + +V I P + E + ++ ++ Sbjct: 61 GSFTDFRGLAVQGYQSLLRPVENVDRARHI----PPGKIAEDSFQSAAESLRQVMSEAGN 116 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQ---- 175 + A R+ G G S + Q A K + +L Sbjct: 117 TAWEGVAAQMMHAPRVAFLGFGVSANMLQYLADK-------SILSTQSQIMLNGAGGLER 169 Query: 176 ------ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY 229 P DL++A++ + G +A+T + L + ++ Sbjct: 170 VAQKVLRLGPGDLVIAMALPRYSQATVDFLKLARGRGAYCIAVTDGPASPLCPHSHEQIF 229 Query: 230 TIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 A +S++I A A + A++ + + + + +L+ L Sbjct: 230 VPASHPVLHSSTIGALAAFEAII-----AVLTAHHQSVSDAVSVTRSLMPYL 276 >UniRef50_C4V4P0 RpiR family transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V4P0_9FIRM Length = 255 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 56/260 (21%), Positives = 92/260 (35%), Gaps = 23/260 (8%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 RI + + L+++D+ + Y+ A S +LA VS +SVV+FAQKLG+ GF Sbjct: 4 ERINEHLRELSETDRSIWRYIDANRTAASRASIHELARACAVSSASVVRFAQKLGFDGFG 63 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 +K + A P D T + Sbjct: 64 EMKAVMRMEAAPAAVPPQDVRSALSGFYD------------------QTWRALMQRDYTR 105 Query: 125 CVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 ++R A R+ G V Q + + QA+ PDDL Sbjct: 106 ASRLIRGAHRVFGYASGYVQTNVMQELKRLFFYDNIFIYEIAGREEFYSVYQAAGPDDLF 165 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS-- 241 + IS +G A+++ G VL+IT N L R++ LY + E Sbjct: 166 IFISLSGESARTVEFAEQLNLKGIPVLSITEMRRNTLASRSTENLYVMPAEFNLPENEAR 225 Query: 242 --ISACHAQGMLTDLLFIAL 259 + A +L ++ ++ Sbjct: 226 LQFKSMLAYFLLLEIWYVHY 245 >UniRef50_D1ARL0 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1ARL0_SEBTE Length = 251 Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 53/262 (20%), Positives = 107/262 (40%), Gaps = 19/262 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + I + Y+ L +D + +Y+ P+T ++ L+ S +S+++ +KLG+ Sbjct: 1 MKLDVLINKYYEKLNSNDLYILNYIKNNPET-SDVNITLLSKMCNSSTASILRMTKKLGF 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ K L +L + ES + ++ D + K+ K N Sbjct: 60 SGYSEFKYFLK-SLTASKESQDLKTRLEVLASDVEHTM--KIFKNN-------------N 103 Query: 121 KLHECVTMLRSARRIILTGIG-ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 +L E +L +A+ I G G L+ Q F+ ++ G N + VQ Sbjct: 104 QLSETCDLLYNAKNIYAYGTGYGQKLMLQEFSRCMLNCGKNIIIIPAFTEFRIAVQNMKE 163 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT-IAEEQATN 238 D+++ S +G R++ + +L+IT F N L + + LY + + Sbjct: 164 SDMVIIASLSGNARDIAELIHILNLKNIPILSITNFNDNTLSKLTPYNLYYQSSNINTED 223 Query: 239 SASISACHAQGMLTDLLFIALI 260 S + S+ +L + ++ + Sbjct: 224 SLNNSSYVTLNLLLNFIYEGYM 245 >UniRef50_UPI0001C31BBF transcriptional regulator, RpiR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31BBF Length = 295 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 52/273 (19%), Positives = 101/273 (36%), Gaps = 8/273 (2%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I R+ ++S K +A Y++ D A ++++LA A S S+VV+F+Q LG++GFP L Sbjct: 25 ITARFDEFSRSQKDVAQYIVDHLDEAAFQTAEELARRASTSSSTVVRFSQALGFEGFPEL 84 Query: 67 KLALSEALASQPESPSVPIHNQIRGD---DPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 + A + +P + N + + E + + + T S + Sbjct: 85 QQAARDEYRRRPAGGADAAPNAVAAAPLFSLDQTEYETALATDHVNVEETARKLSRSDVE 144 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQASSPDDL 182 + + +A ++++ G A L + A V L + L Sbjct: 145 AAIEAIATADKVLIAGTDQMAFFASYLRHLLSLLDIRAEVVASPSQEALGRLSRIDESTL 204 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ +S + +AIT T + + + A LY + A + Sbjct: 205 VIGLSAGRPHPLIARTMKLARHRRSPTIAITDATLSEVARLARTRLYYSSNSPAY----V 260 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 + A L L + +D + RI+ Sbjct: 261 RSHTALLSLIQALAYGVYSRDAQQYDMRIKAYR 293 >UniRef50_A8S164 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S164_9CLOT Length = 257 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 49/263 (18%), Positives = 96/263 (36%), Gaps = 21/263 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN RI + Y L +D+++ + +L + ++S +LA VS++++++ +KLG Sbjct: 1 MNLEYRINESYDRLTANDREVLNRILRNKAQSAGMNSTELAAFCHVSRTTLIRLFKKLGI 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF +L L E Q + ++E + + + E Sbjct: 61 GGFAEFRLLLKERAGMQELARLD-------------------MEEIISNYHRMVEGLREY 101 Query: 121 KLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + + A I L G G + + F + G + D + + Sbjct: 102 DYSVILEAIHEAGTIYLYGTGNEQKAIGEEFKRIFLMFGKCCIDLFDYGEVEYASRYFKS 161 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DL +AIS +G + K L+IT +T N + + + LY + Sbjct: 162 GDLFVAISLSGESENGIQVLRFVQCREIKTLSITRWTNNTMARMCRYNLYAGTRMISGGG 221 Query: 240 ASISACHAQGML-TDLLFIALIQ 261 A + D+L + ++ Sbjct: 222 EPGYEMVATFYILLDMLSVNYLE 244 >UniRef50_C3RJ39 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RJ39_9MOLU Length = 270 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 97/252 (38%), Gaps = 3/252 (1%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 L ++K +A +LL + +L+S +L ++ SQ++V + +KLG+ F L Sbjct: 10 NNLTNTEKSIAQFLLNKDQKINNLTSSELGKQSYTSQAAVTRLYKKLGFNNFREFLSTLI 69 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 + +P + + L + + AM T + + ++ + S Sbjct: 70 LERNDYLKYNDLPTEHPEQYFTSLEDTEKVIASLYEKAMIQTNRLLDKNVVNRVCNRILS 129 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGV 191 A I + GIG S +A+ +KL +G + ++ ++ + I+ TG Sbjct: 130 ASFIDIYGIGLSDTIAKEMCFKLQSLGLPCSYQNGINIKYIDNMQQHQSNVSILITTTGD 189 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRA-SHCLYTIAEEQATNSASISACHAQGM 250 + A + + I G L Q + L+ + S+ A + Sbjct: 190 NNLIKEIAKILKNRNVYTVGILGKKGKDLIQLCHDYLLF--DTSLFEDIDSLCATFSAEY 247 Query: 251 LTDLLFIALIQQ 262 + ++L+ L+ + Sbjct: 248 VINILYATLLYR 259 >UniRef50_A9D8B4 Putative uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D8B4_9RHIZ Length = 281 Score = 160 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 97/279 (34%), Gaps = 8/279 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M +++ L ++KK+A L + + +LA AG S +V++F +LG+ Sbjct: 1 MAIREQVQAELGNLPGAEKKIAHAFLANYPSIGLSTIAELAALAGASAPTVLRFVARLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + +P + L + +Q SP + D + + ATL E Sbjct: 61 ESYPDFQRRLRADVQAQLMSPLERARSSGPTTDNPA--LKASFANIAGNLEATLKAVPES 118 Query: 121 KLHECVTMLRSARR-IILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASS 178 + +L +R G + VA A L I + Sbjct: 119 EFETACELLSDSRSACCFVGGRFTDAVAGYMAAHLRIIRPGVRHFGGQTSTWRDQLLDIR 178 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P D+ + + +L + + +++ IT + + + A L + + T Sbjct: 179 PGDVAVLFDIRRYQSDLVRLGELLAERKARIILITDPWLSPIARSARVVLPCVVDADRTW 238 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 +S++ L + + + + A R++ E + Sbjct: 239 DSSVT----LLALAEAMIDRVSRAQAATAGTRMQTLEDI 273 >UniRef50_D2TS37 Putative DNA binding protein n=1 Tax=Citrobacter rodentium ICC168 RepID=D2TS37_CITRO Length = 282 Score = 160 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 51/276 (18%), Positives = 107/276 (38%), Gaps = 16/276 (5%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L+ IR GL+ +K+ ++ PD + +LA+ S+ S+ +F + G+K Sbjct: 7 NLLINIRNEVAGLSPILEKVGRFVTENPDFVMRHTITELADSIETSEGSITRFCRAFGFK 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF + AL+ L P + +I + ++ + + + ++ Sbjct: 67 GFSDFRTALA--LEQGAARPEAQGNEEI--------------ADVVTSIRDSYAIINSQE 110 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L L + + +G + VA L+K+G +A+ V + ++V Sbjct: 111 LQAAAAWLNQVNNVAIYAVGTAVPVALFLQMNLIKMGKSASFVDRFYLTTSSVMLEPQSQ 170 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++ + ++ A + G ++L++T T L + + L + Sbjct: 171 GVIVVHTEQTSADMMQALALAKQHGARILSLTRGTFAPLSRLSDWNLQAAVALKGEGEFG 230 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + M+ D L AL +QD A R H +++ Sbjct: 231 FAEIAGAMMVADRLLNALEEQDERYAECRKAHQKSI 266 >UniRef50_A6P0T4 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P0T4_9BACE Length = 274 Score = 160 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 109/266 (40%), Gaps = 11/266 (4%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L ++++K+ DY+ D S QLA G+S ++V +FA+ +G F LK Sbjct: 11 ELTRAEQKILDYINTNTDAFLFSSIGQLAQRLGLSDATVSRFARHVGCADFKDLK----S 66 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 + Q P+ + + D ++ + T E + + V L SA Sbjct: 67 MVVEQAAGPAAKVTETLSRDGAFSPAA--WLERQQMYLQKTARQLDEAEFNRGVETLASA 124 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASSPDDLLLAISYTGV 191 RRI L G AS +A+ A++L ++G + + LL + + DL++ S++ + Sbjct: 125 RRIFLHGKNASSSLARMLAFRLGRLGLQVSLLPSGGSELLEGLLQAGKQDLVVMFSFSKL 184 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGML 251 RE + D G + LA T ++RA L+ E+ + A L Sbjct: 185 SREGRVILDYSRTAGYQTLAFVSRTCIPPEERADISLFAYRGEEKE----YHSMAAPTAL 240 Query: 252 TDLLFIALIQQDLELAPERIRHSEAL 277 DL+ +A+ + + + L Sbjct: 241 LDLMVLAVTSRLGARGTDSLERLHQL 266 >UniRef50_A3JGM7 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=A3JGM7_9ALTE Length = 292 Score = 160 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 54/280 (19%), Positives = 103/280 (36%), Gaps = 5/280 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R+ ++ +++++A Y + S+ LA + G S ++VV+ A+ LG+ G Sbjct: 7 FEDRVNACLGQISPAEQRVARYFQDNREEVLIASASALAKQVGTSDATVVRAAKSLGFTG 66 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 L+ L+ L + + ++ + Sbjct: 67 MEELRRTLAIELRRDTSPAGRLARTLSEVSGDPLSALNVTLDIHQKSLDDLRQNITPSLF 126 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLAT-VQASSPDD 181 V + ARRI + GIG S +A+ F+ +L + G +A ++ LLA VQ D Sbjct: 127 QSSVRAIVDARRIFIFGIGPSSAIAEYFSIQLSRFGIDALSLTQTGLLLADGVQKFREGD 186 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 LL +Y V EL + ++ + K + + L+ R L S Sbjct: 187 LLAVFAYGRVYPELTVLLNQAEQCSMKKMLFSDTLGPTLRNRVDLVLPVA----RGRSDM 242 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +S A L + L + + + + + L +L Sbjct: 243 LSMHTATLALIEGLLVGVATERPKETIANLESLNKLRTEL 282 >UniRef50_A8S127 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S127_9CLOT Length = 285 Score = 160 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 113/288 (39%), Gaps = 13/288 (4%) Query: 1 MNGL-LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M L R+++ L ++ADY L + ++SS +A E GVS +S+++F++ +G Sbjct: 1 MTILAERLKE--SKLTNQQHRIADYFLKNEERIGNMSSMDVAREIGVSDASIIRFSRAIG 58 Query: 60 YKGFPALKLALSEALASQPESPSVPIH-----NQIRGDDPLRLVGEKLIKENTAAMYATL 114 YKGF LK + +LA + + + + + G + + + ++ + T Sbjct: 59 YKGFTDLKNDIYNSLAGEASAAVRNMQLSDRFDVLSGKFNDQNIPDTFVELMNYNITKTF 118 Query: 115 NVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKL-MKIGFNAAAVRDMHALLAT 173 + N E M+ ++R + G+ VA +FA L + + + Sbjct: 119 HQNPVESYDALTDMILMSKRKYIIGLRGCMGVAGHFARLLGFAVNQVVTLPHNETEAMGI 178 Query: 174 VQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE 233 +Q P+D+ + S+ + + ++ +T + + Sbjct: 179 LQDIGPEDIFILFSFARYYKIDMFLINVAKSHKARICVVTDSPLAPMIPCSDISFIAETS 238 Query: 234 EQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + ++ M+ + + + +++ E +R + +AL + Sbjct: 239 HMSF----FNSAIGVEMIGEYIVTLVCRKNSEEYRKRAKERDALTTEF 282 >UniRef50_D0CNW7 Transcriptional regulator, RpiR family n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CNW7_9RHOB Length = 291 Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats. Identities = 58/274 (21%), Positives = 104/274 (37%), Gaps = 7/274 (2%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 RI+ L +S+++L LL A S +LA A VS +V++ A+KLG+ GFP Sbjct: 10 QRIQDELDDLTRSERQLGSILLQDYPMAGLQSITKLAAAAQVSTPTVIRMARKLGFDGFP 69 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 AL+ AL E +A+Q + P I D+ + + + M TL + Sbjct: 70 ALQDALREEVAAQIKKPISKRDAWIVDDETEHPI-TRFAQAVWTNMRHTLERLDKSMFDA 128 Query: 125 CVTMLRSARR-IILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASSPDDL 182 +L RR + + G + A + I N + + + + Sbjct: 129 VAQLLADTRRHLYVVGGRITRSNADYLFNHMQIIRPNVTMLGNSANVWPQYLLDMDDSSV 188 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L+ L A G V+ T + + + A + + + E +S Sbjct: 189 LVIFDIRRYEAHLEKLAQVASDRGVTVVLFTDQWGSPIGRAAHYTFHALVEAP----SSW 244 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + A ++++ L + + E + ERI E Sbjct: 245 DSTIALQLISETLIAEVQEARWEESKERIEELER 278 >UniRef50_A3YDZ1 Putative transcriptional regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3YDZ1_9GAMM Length = 295 Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats. Identities = 53/281 (18%), Positives = 106/281 (37%), Gaps = 10/281 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + RI+Q Y L+ + +KLA +L S+ +LA AGVS+S+V + Q+L YK Sbjct: 5 SIEQRIKQIYDQLSPTQQKLASCILNHQGDIATYSATELAKLAGVSKSAVTRLLQRLEYK 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F +K + A PI + + V I+ + + TL Sbjct: 65 DFGEVKRQVRAA-----RRWGTPIAEKQPEHQSISTVFNDYIQCDQNNIQRTLESIQTSD 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL-ATVQASSPD 180 E V + A R+ + G + +A + +L + N + L V + + Sbjct: 120 FDEAVKSIGQAERVYVIGYRNNHALALHLRQQLTQCRDNVNLLPLPGQTLGEEVASFTNK 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D ++ + L + + G ++ IT ++ + + + Sbjct: 180 DTVIIMGIRRRPAWLKNLMITLRKRGIFLIYITDHADVNPKEVSDIHFSCVVR----GVS 235 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + + + +L + Q++ A +RI+ E + L Sbjct: 236 AFDSYASVMNIISVLANGVYQENYNEANDRIQAIEETYQTL 276 >UniRef50_A1BB42 Transcriptional regulator, RpiR family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1BB42_PARDP Length = 336 Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats. Identities = 56/274 (20%), Positives = 108/274 (39%), Gaps = 5/274 (1%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 R +R L+ + +++A Y+ S+ ++A AG S ++V++ Q LG+ G Sbjct: 49 ERYERRRDRLSPAFQRVAGYIDANRLAVLTSSAIEIARAAGTSDATVIRTVQALGFAGLQ 108 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 L+ L+ L + ++ + + L+ A + + E L + Sbjct: 109 ELRRELAAGLGQRTTPADNLKRTLDDAEEQIDAAVDNLLDVYAAGLEVLRSAGFRENLMK 168 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQASSPDDLL 183 ++ L ARRI + GIG + +A FA +L + G + L + +P D + Sbjct: 169 ALSALNDARRIFVFGIGPTAHIAAYFAARLRRKGRQQQVIDRTGAGLADQLLELAPGDAV 228 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + ++Y + +E N E R+ V+ I+ + L RA L + + Sbjct: 229 VMLAYGSLYKEANATLAEARRLRLPVILISDSAQSELSSRAQVVLAVP----RGRNDRFA 284 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 ++L + L D E A + E L Sbjct: 285 LHGVTVFCLEMLLLGLAAGDSEKALAALADLERL 318 >UniRef50_A9H555 Putative uncharacterized protein n=1 Tax=Roseobacter litoralis Och 149 RepID=A9H555_9RHOB Length = 286 Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats. Identities = 58/290 (20%), Positives = 108/290 (37%), Gaps = 19/290 (6%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M RI Y L+ + A ++ P S + +A +GVS ++ + A+ LGY Sbjct: 1 MTVQDRISGSYADLSDKLRVAAKFVSENPAEIATRSLRSVAQSSGVSPATFSRLARALGY 60 Query: 61 KGFPALKLA--LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 + + L+ L P S G + R + E A + + + Sbjct: 61 RDYEQLREEGRLVVERQMSPFSERAAKLRAQAGKEQGRALLEHQSAACIANVEKLVASVN 120 Query: 119 EEKLHECVTMLRSARRIILTG-IGASGLV------AQNFAWKLMKIGFNAAAVRDMHALL 171 + L V + A+ ++L G +G++G++ Q F G N L Sbjct: 121 RDALERAVRQIDEAKTVLLVGSMGSAGVIDYLGYMGQWFKQNWKVAGRNGI------ELS 174 Query: 172 ATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI 231 AT+ + D+++ + R A G K + I+ + Q A+H Sbjct: 175 ATLSRINEGDVVVGLVKAPYARRTVAALKAAQDRGAKTVVISDSPTSPALQFANHSFIVA 234 Query: 232 AEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + S+ A +L + + LI + A E+IR +E +++L Sbjct: 235 TQSPQF----FSSYAATLVLLETIISMLIARAGPDAEEQIRAAEQTIERL 280 >UniRef50_A4AG13 Putative uncharacterized protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AG13_9ACTN Length = 302 Score = 160 bits (405), Expect = 6e-38, Method: Composition-based stats. Identities = 47/283 (16%), Positives = 108/283 (38%), Gaps = 12/283 (4%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 ++++ ++ L+ ++++++ L+ A +LA A VS +V++ KLG +P Sbjct: 9 EQLKKEHESLSPAERRVSRVLIADYPVAGLEPVHRLAERANVSAPTVLRLISKLGIGSYP 68 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYA----TLNVNSEE 120 ++ L + ++ + SP + P G K + ++ + T N E Sbjct: 69 QMQKLLRQEISVRTSSPLEMYGERSASTTPGTQSGIKFVADSKRVLAEGLDATFNAIPET 128 Query: 121 KLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS-- 177 ++ E ++ + R RI G S L+AQ L + + V D Sbjct: 129 EIIEIAKLIANPRNRIWTVGGRFSDLLAQYLTLHLRLLRKDVNHV-DPTEQEKAFTLLDF 187 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 + D+L+A Y + + T + + A + L + Sbjct: 188 TSRDVLIAFDYRRYQGGTVSFLKNAKNKKATTVLFTDPWLSPAAKHADYLLSSSVTSP-- 245 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + + L + + ++++ + +RI+ +AL +K Sbjct: 246 --SPFDSLTSGFALVETVIAGVVEELGDSPTQRIQAFDALQEK 286 >UniRef50_Q8EMY0 Putative uncharacterized protein OB2710 n=1 Tax=Oceanobacillus iheyensis RepID=Q8EMY0_OCEIH Length = 276 Score = 160 bits (405), Expect = 6e-38, Method: Composition-based stats. Identities = 48/273 (17%), Positives = 107/273 (39%), Gaps = 17/273 (6%) Query: 1 MN--GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 MN + R + + + KK+ YLL +P ++++ + VS++ V++F + Sbjct: 1 MNREYVERTKTNLPEMTKGLKKVGRYLLAEPIVFAIHPAKKVGSMIDVSETMVIRFCHFI 60 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 GY+G+ L+ + L S S + + E+ I+E+ + N+ Sbjct: 61 GYRGYADLQKEVRHHLISLENSNDKKNVSTKESN------FEQFIEEDVKNLKQMKNIID 114 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 + L++ + + + ++I+ G S A F++ L I NA+ R + ++ Sbjct: 115 VDVLNDVIERILDSEKVIVAGYYHSFSFAHWFSFNLNYIVGNASLFR-PESDAGILELMP 173 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA-- 236 ++ S+ + A+E + G V+ IT + + A + + + + Sbjct: 174 KKSCIIIFSFFRYAIDTIRLAEEAKKKGVPVIVITDSWASPAAEYADFVISIYSSDNSNV 233 Query: 237 -TNSASISACHAQGMLTDLLFIALIQQDLELAP 268 I+ L + + LI Q + Sbjct: 234 LLQKGPIT-----MSLMNSILSKLIDQVQDRGK 261 >UniRef50_C2BN80 RpiR family transcriptional regulator n=1 Tax=Corynebacterium pseudogenitalium ATCC 33035 RepID=C2BN80_9CORY Length = 284 Score = 159 bits (404), Expect = 7e-38, Method: Composition-based stats. Identities = 55/284 (19%), Positives = 109/284 (38%), Gaps = 8/284 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + +I ++ L+Q++K A LL + Q A +A VS +++V+F Q LG+K Sbjct: 4 SITEQINSKFPSLSQAEKDAARCLLNSYPWVGLKTVQHFATQANVSSATIVRFVQTLGFK 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQI--RGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 GF + AL E + + SP + +D L + + AT + Sbjct: 64 GFKQFQNALMEETSEREASPLTQAGDDFTNSANDLLAQTLNQTADAFLRGIEATFKYAQD 123 Query: 120 EKLHECVTMLRSA-RRIILTGIGASGLVAQNFAWKLMKI-GFNAAAVRDMHALLATVQAS 177 E + V + + RRI+ G S ++AQ+ +L G A+ L+ + + Sbjct: 124 EDFEKVVALFSNQERRIVSHGGSFSWVLAQHLVAQLSLFRGKQIASPLSDLPLIELIYQT 183 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 S +D+ + + + A + G V+ +T + + + L E Sbjct: 184 SANDIWVFFDFRRYSPQSEQIARLVKGNGAAVVLVTDRWMSPISSYSDVSLVARVE---- 239 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 L + + + ++ + + + E L K+L Sbjct: 240 AFGPSDTLVPAFALVEAICECVSRKIGKAGIQYLEAFEVLRKEL 283 >UniRef50_C5EIL1 RpiR-family transcriptional regulator n=2 Tax=Clostridiales RepID=C5EIL1_9FIRM Length = 260 Score = 159 bits (404), Expect = 8e-38, Method: Composition-based stats. Identities = 48/269 (17%), Positives = 96/269 (35%), Gaps = 25/269 (9%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ RI + Y L +D+++ + +L D ++S +LA VS++++V+ +KLG Sbjct: 1 MDLEKRINENYDRLTANDREVLNLILRDKDRTTQMNSPELAAHCHVSRTTLVRLFKKLGI 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F +L L E S ++++ + Sbjct: 61 STFAEFRLLLQEKSGGGTASRLD---------------MQEILSGYHRMVDD----LKAY 101 Query: 121 KLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++ A I L G G + + F + G + D + + Sbjct: 102 DYDTVCQVIHEADTIYLFGTGNEQKAIGEEFKRIFLMFGKCCIDLFDYGEVEYASRNFKA 161 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE-----E 234 DL +A+S +G + + + L+IT +T N + + + LY + E Sbjct: 162 KDLFIAVSLSGESQSGIDVLRFVQCRDIRTLSITRWTNNTMARMCRYNLYAGTKMIGGGE 221 Query: 235 QATNSASISACHAQGMLTDLLFIALIQQD 263 A A +L D+L + ++ Sbjct: 222 GVKQGAGYEMVAAFYILLDILSVNYLEYM 250 >UniRef50_C5EHV8 RpiR-family transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHV8_9FIRM Length = 267 Score = 159 bits (404), Expect = 8e-38, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 94/254 (37%), Gaps = 10/254 (3%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 + L+ ++ + ++ + +S Q LA++ S +++++F +KLGY GF LK Sbjct: 4 AVIKSLSNNELNILKFVYEHGEDVPDMSIQALASQVCYSSATILRFCKKLGYSGFAELKY 63 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 AL A +P P + + + T + SE++L Sbjct: 64 ALRAAAKKEPSRPGTHKAQDFTTWMMMDSLCSD--------IEGTSKLISEDQLGRTFRY 115 Query: 129 LRSARRIILTGIGA-SGLVAQNFAWKLMKIGF-NAAAVRDMHALLATVQASSPDDLLLAI 186 S+ I L G + +++ F L IG N + ++ + LL+ I Sbjct: 116 FDSSCPIYLWAPGGITSILSDYFEKLLFSIGRQNVYKIESAKMGEHILRNVHTESLLILI 175 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S TG VL+IT +T N + A+ +++ A ++ Sbjct: 176 STTGNFGPTVRLGKIARMNDIPVLSITPYTSNEVAGLATVSFRFFTDQRENRGAEFTSRL 235 Query: 247 AQGMLTDLLFIALI 260 + + + + Sbjct: 236 PVFYVINSIIRCYL 249 >UniRef50_A1B8L9 Transcriptional regulator, RpiR family n=3 Tax=Alphaproteobacteria RepID=A1B8L9_PARDP Length = 305 Score = 159 bits (404), Expect = 9e-38, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 111/277 (40%), Gaps = 8/277 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RI ++ + ++ A ++L PD +S ++LA AGV S++ + A+ LG+ G Sbjct: 22 LRDRIIGTFESMPPQLQQAARHILEHPDEVALVSMRELARNAGVQPSTMTRLAKFLGFAG 81 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + ++ ++A+ + + + D+ + ++++ + + S +L Sbjct: 82 YEDIRAHHAQAIRLRVDGFAAQQERASTSDEG---LAQQMLHSLSLQIARLGEPASIARL 138 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASSPDD 181 L ARRI + G+ + LVA +F + + +G + + + + D Sbjct: 139 EAAAERLARARRIYVLGLRSCHLVAWHFHYVMTLLGERTEHLDGPAGTVGDGLMRAGAKD 198 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +LLAIS R A G V+AIT + L A + E Sbjct: 199 VLLAISINPYARHSLELAQLAREKGMGVVAITDSEVSPLNGVADEVILCATESPTF---- 254 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++++L L +D A E ++ ++ + Sbjct: 255 FHTLAPALAVSEVLCGLLANRDRAAALEALQKADRHL 291 >UniRef50_Q5LQ93 Transcriptional regulator, RpiR family n=5 Tax=Rhodobacteraceae RepID=Q5LQ93_SILPO Length = 290 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 57/275 (20%), Positives = 100/275 (36%), Gaps = 7/275 (2%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 RI+ + L +S+++LA LL S +LA AGVS +V++ A+KLG+ GFP Sbjct: 10 QRIQDETEQLTRSERQLASILLQDYPMGGLQSITKLAVAAGVSTPTVIRMARKLGFDGFP 69 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 AL+ AL E +A+Q + P + + + + + A M TL Sbjct: 70 ALQDALREEVAAQIKKPISKRDGWVVDEGAEHPLM-RFAQVVWANMRHTLERTDTALFDR 128 Query: 125 CVTMLRSARR-IILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASSPDDL 182 +L R + + G + A + I N + + + + Sbjct: 129 AAAILADTSRPLYVVGGRITRSNADYLYNHMQIIRPNVTMLGNSANVWPQYLLDMDQSSV 188 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L+ L A G V+ T + + + A +S Sbjct: 189 LVIFDIRRYEAHLEKLAQIASERGVTVILFTDQWGSPIGRVADLTF----NGLVEAPSSW 244 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + A ++ + L + E + ERI EA+ Sbjct: 245 DSTIALQLIVEALIAEVQGARWEESKERIEELEAM 279 >UniRef50_B9JRN1 Transcriptional regulator protein n=2 Tax=Agrobacterium RepID=B9JRN1_AGRVS Length = 298 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 56/274 (20%), Positives = 105/274 (38%), Gaps = 5/274 (1%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 R+++R L+ +ADY+ S+ ++A E G S ++V++ Q LG++G Sbjct: 19 ERLKKRRDQLSPGLLTVADYIDGHRHAVLSKSALEIAFETGTSDATVIRAIQALGFRGLI 78 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 LK L L + +++ A+ A + + L + Sbjct: 79 DLKETLKAYLGETDSPIEKMAATTDDISGNSDAAVDFVLENQQTALAALASPENRAALSK 138 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSPDDLL 183 ++ AR I + GIGASG++A A + GF + A+ L + +L Sbjct: 139 AALLMAEARAIGVFGIGASGIIASYGARLFSRSGFPSYALNTTGISLAEQLLGLGTGHVL 198 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + + + RE E R+ ++ + G + L+Q AS L S ++ Sbjct: 199 VMLLHGRPHREAMTVISEAKRLDVPLILVLGQAESVLRQHASVSLVVP----RAKSEQVA 254 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 ++ + L +AL E E + L Sbjct: 255 LHAPSLVVIETLALALSALKPERTLETLNRLVEL 288 >UniRef50_A5G0Y8 Transcriptional regulator, RpiR family n=7 Tax=Proteobacteria RepID=A5G0Y8_ACICJ Length = 314 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 49/263 (18%), Positives = 94/263 (35%), Gaps = 10/263 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + I +Y L+ +K+A ++ P+ S +A SS+V+FAQ+ GY Sbjct: 18 GIVNLITAQYPNLSSGFQKIARFVTQNPNVVALESISVIALRCDTHASSLVRFAQEFGYS 77 Query: 62 GFPALKLALSEALAS-----QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNV 116 GF L+ LA+ + ++ L+ + AA+ L Sbjct: 78 GFKELQAVFQTRLATAAPGFRERVKALDGELSRHARSGNLGYLRDLVVRDIAALQDLLER 137 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQ 175 E+ L ++ A I + G S +A + L + + + Sbjct: 138 VPEDTLTGAARLITGADTIYIAGQLRSEPIALLLRYLLTMLHRRVVLLDPAGGLAQEMAE 197 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 + D+L+AI++ +E+ ++ G V+AIT + + + A +E Sbjct: 198 TMTRGDVLVAIAFRHYAQEVVAISERAAASGTPVIAITDSQLSPIAKDAKALFTVPEDEY 257 Query: 236 ATNSASISACHAQGMLTDLLFIA 258 + A L L +A Sbjct: 258 SFA----RTLAAPMCLVQCLAVA 276 >UniRef50_B7QPC3 Transcriptional regulator, RpiR family n=4 Tax=Rhodobacteraceae RepID=B7QPC3_9RHOB Length = 290 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 98/277 (35%), Gaps = 7/277 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 IR +Y L QS+KK A+ LL A S +A+ A VS +V + QKLG+KG Sbjct: 8 VRELIRDQYSALTQSEKKFANALLANYPAAGLASITIVASNAEVSTPTVARMVQKLGFKG 67 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 +P AL + L ++ P+ + P + + + T + T + E+ Sbjct: 68 YPQFHQALLKELEAKGSGPTQR-RANWASEAPEGHLLNRFAQAVTENLSQTFSNVDSEQF 126 Query: 123 HECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQASSPD 180 V L + R+ + G + +A I + V Sbjct: 127 DAAVRQLANTEGRLYVVGGRITRALADYAFTHFQAIRQRVTHMTSSSATWPHYVLDMVEG 186 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D LL L A+ G V+ IT + + A+H E + Sbjct: 187 DTLLMFDVRRYETNLQRLAELAAERGVSVILITDQWSSPINSVAAHTFNCWVE----IPS 242 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + + + ML + + A ++ + R + + Sbjct: 243 AWDSNISTMMLLEAMISAAQEERWDETRARYEKLDTI 279 >UniRef50_A5TS02 RpiR family transcriptional regulator n=3 Tax=Fusobacterium RepID=A5TS02_FUSNP Length = 283 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 43/283 (15%), Positives = 115/283 (40%), Gaps = 12/283 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L +++ + +K++A++ L + ++ +A VS +SV++F + LG++ Sbjct: 10 KILEKLKNTKP--TKKEKRIAEFFLDEEQRVFLMNVADIAKAIDVSDTSVIRFIKSLGFR 67 Query: 62 GFPALKLALSEALASQPESPSVPI-HNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F K + E + S+ + + I + I ++ + + I + + N S++ Sbjct: 68 NFTDFKNSGQENIKSRLDKTNDFIKNLDIIKENSIEQLY---INKINEEVNKIFNSISQK 124 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSP 179 ++ + +++ A+ + G ++ ++ F +L + N + D ++ ++ Sbjct: 125 QIKKISSLIIKAKHKYVVGFKSTAGISNFFGVRLGFMLENVSTFNIDDSVVINSIFNIKK 184 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +D+L+ Y + + A K++ T L + + + + Sbjct: 185 EDVLIIFDYPMYSKVAKVLAKMTKENKAKIILFTDSDNAPLAEYSDIL----YKVKLNGI 240 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA-LVKKL 281 + ++ + +L + L + Q E A R L++KL Sbjct: 241 SVFNSLISTQILVEYLLTYISQFIEEKAKIRFTKIRKYLIEKL 283 >UniRef50_Q046R3 Transcriptional regulator n=7 Tax=Lactobacillus RepID=Q046R3_LACGA Length = 263 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 95/258 (36%), Gaps = 10/258 (3%) Query: 8 RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALK 67 + L+ ++ L + + P +S +L+ A VS +++V+ QK+GY G+ + + Sbjct: 11 NMQNNDLSNAELHLWEIVQNNPQKIAKMSIVKLSQFAHVSTATIVRTMQKMGYSGYTSYR 70 Query: 68 LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 +L ++ + + +I +N M TL+ S + + ++ Sbjct: 71 ESLK---------LQDRSNSNFDVLNEADDKIKSVITKNEIEMNNTLHNLSYSNIEDSIS 121 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAIS 187 M + A+ + + G S + Q KL G D + + + D L++ IS Sbjct: 122 MTKQAKVVYIFARGLSESIGQEIMVKLQLTGKYVEFHADPNIIKTASKRIKQDALVIFIS 181 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY-TIAEEQATNSASISACH 246 G EL AA + + T L ++ +++ + + Sbjct: 182 LNGNTPELVDAAKSLSHHDVPTITFTTNPKGQLASLSTLTFMGYMSKTNYFPDYEVRSRL 241 Query: 247 AQGMLTDLLFIALIQQDL 264 ++T + A + Sbjct: 242 PLQIMTRIFSDAYSVRTG 259 >UniRef50_C4XF00 Putative uncharacterized protein n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XF00_MYCFE Length = 274 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 105/271 (38%), Gaps = 17/271 (6%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 + +++K+ DY+ P+ S ++ A E S + + + +KLG+ + ++ + Sbjct: 11 MTNAEQKIIDYINENPNEFAENSIEKNAVETFASTAVLSRIYKKLGFSSYKDMQFYVKYN 70 Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR 133 S + P + N I K+ K A+ T +++ + ++ Sbjct: 71 YLSNLKIPKELLDNSIY----------KIAKTYMEAINLTSKYLDIKEIDYICEEINKSK 120 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA--SSPDD-LLLAISYTG 190 + GIG+S + A+ + + K + + D H L ++ + + ++ S +G Sbjct: 121 LVYCFGIGSSSISAKELSLNIEKFDYYSVFHNDFHNFLISLYSHELKENKPPVILFSKSG 180 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGM 250 E+ + +L L IT +L+ + H L EQ ++S+ Q Sbjct: 181 KTNEILFLCETLLEHKFPFLLITANR--SLKNKYPHVLLHETIEQKERYHALSSKIVQQY 238 Query: 251 LTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + D++ LI ++ ++ + Sbjct: 239 IADIIADHLISNSPNKLNR--KNWLKMINEW 267 >UniRef50_Q97LM6 Transcriptional regulator, RpiR family n=6 Tax=Clostridiales RepID=Q97LM6_CLOAB Length = 257 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 91/254 (35%), Gaps = 20/254 (7%) Query: 18 DKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQ 77 D + Y+ +S +LA + +S++++ +F QKL +GF K+ L L Sbjct: 18 DLHIWKYICCNKRECCTISIDELAKKCNISRTTISRFTQKLSLEGFGEFKVRLKLELGVS 77 Query: 78 PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIIL 137 S E + ++ + E+ E M+ A+ + + Sbjct: 78 NNFKSSS--------------VEDVYQDYYKTIKD----MKEKDFLEICRMIYGAKHLFV 119 Query: 138 TGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELN 196 G GA A + + V + ++ ++ +DL++ IS +G ++ Sbjct: 120 YGTGAVQIAAANELKRHFISVNKFFVTVHGEAEMNMVLETATDEDLIVIISLSGEKKSAV 179 Query: 197 LAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGML-TDLL 255 ++ ++IT + N++ + LY I Q + ++L Sbjct: 180 EYLKKVKVKNIPSISITKLSDNSIARLCDENLYIITRNIKIEGVVTCENVGQYFILIEIL 239 Query: 256 FIALIQQDLELAPE 269 F+ I +L E Sbjct: 240 FLKYITYLGQLKKE 253 >UniRef50_B0G8I7 Putative uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G8I7_9FIRM Length = 275 Score = 157 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 48/276 (17%), Positives = 113/276 (40%), Gaps = 18/276 (6%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + I++R L + +A Y++ PD +++ ++L+ + GV++ +++ LGY Sbjct: 1 MDIIESIKKRSTELTRKQYMVAKYMIDHPDEMAYITLKELSRDIGVTEITILNTCASLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHN------QIRGDDPLRLVGEKLIKENTAAMYATL 114 + F +K + + + ++ + + D V ++ E A+ Sbjct: 61 ESFTQIKYEFRKDIIQKQKTDVLDDSSVYTEKVPKYEHDNREKVLAEIGDEEVKAITDYW 120 Query: 115 NVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMK---IGF--NAAAVRDMHA 169 +K E ++ ++++I + G G S +A+ +L +G N D++ Sbjct: 121 KNIDLKKYFEAADLILNSKQIFICGRGISWTMAEYMKNRLSSCEVLGITANTELNDDVYG 180 Query: 170 LLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY 229 +L + + + LL+ IS+ + K+LAIT A+ Q A L Sbjct: 181 MLTS---LTEESLLIPISFPDYYFMTTKVTERARMQNAKILAITDRLDTAVAQCADLTLT 237 Query: 230 TIAEEQATNSASISACHAQGMLTDLLFIALIQQDLE 265 + ++ + ++ +LL A+ + + Sbjct: 238 APTMTRVF----LNTLTSPMLMLNLLTSAIKLKQGK 269 >UniRef50_Q184P9 Phosphosugar-binding transcriptional regulator n=5 Tax=Clostridium difficile RepID=Q184P9_CLOD6 Length = 261 Score = 157 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 90/262 (34%), Gaps = 21/262 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I Y L +D + Y+ +S +LA + VS++++ +F +KL Sbjct: 1 MRLEEMIFFNYNKLNDTDLLIWKYITANKKHCSKMSINELAMKCNVSRATITRFVKKLDL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGF K+ LS + + ++ + ++ + + Sbjct: 61 KGFSEFKVLLSWE------------------SEKVHVIENQSFDIACNSIIKYVEDQKNK 102 Query: 121 KLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 +L +R I G G +VA+ + + S Sbjct: 103 DYDALCKLLYESRTIYAYGSGDIQNVVAKQIKRMFLSCQEIIYDFEGRTFDDSFYNIVSK 162 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +D+++ IS +G A + +G K+++IT F N L + +Y A + Sbjct: 163 NDVMIIISLSGENENTLNIARRLKLIGTKIISITEFKNNTLTDLSDESIYISATNISFLQ 222 Query: 240 ASISACHAQGM--LTDLLFIAL 259 S L +LLFI Sbjct: 223 MHPSYKLTMLYFILIELLFIKY 244 >UniRef50_Q16A62 Transcriptional regulator, RpiR family, putative n=4 Tax=Rhodobacteraceae RepID=Q16A62_ROSDO Length = 285 Score = 157 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 51/281 (18%), Positives = 100/281 (35%), Gaps = 12/281 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M +I Q + ++KLA +L A S Q LA + VS S+ +F K+G Sbjct: 4 MQIRYKIEQASDTFTKGERKLAAAILSDYPYAGLSSIQDLAKRSEVSAPSISRFMTKIGL 63 Query: 61 KGFPALKLALSEALASQPESP-SVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ AL L SP + + ++ D L K A+ + +E Sbjct: 64 SGYQEFHRALIAELKDGDRSPVEMHVGDRHIEGDYLSDFLAK--ASAQMAI--AGDAITE 119 Query: 120 EKLHECVTMLRSARR-IILTGIGASGLVAQNFAWKLMKIGFNA-AAVRDMHALLATVQAS 177 E+ + +L + + I + G S +A + ++ L + D + Sbjct: 120 EQFNRVCALLANPKHSIYVIGGRISDTIAAHLSFHLRQARRGVYHLPSDPETWPEYLLRM 179 Query: 178 SPDDLLLAISYTGVRRELNLAADEML-RVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 D+ + + ++ L A G +V+ +T + + + AS L E Sbjct: 180 KGGDIFFVVDFRRYQKALASLAGLARNERGARVVVMTDKWISPVARHASDVLPVPIESGT 239 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + +T+ + + + + +RI + L Sbjct: 240 LWD----TYSSALAITEAIVTRIAEDNWAHTKDRIESWDKL 276 >UniRef50_C2CHV1 RpiR family transcriptional regulator n=1 Tax=Anaerococcus tetradius ATCC 35098 RepID=C2CHV1_9FIRM Length = 268 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 107/279 (38%), Gaps = 20/279 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + IR+ Y L ++D ++ Y++ A LS +LA++ +S SS++ F +KLG Sbjct: 1 MILMNLIRENYSKLNKNDLRIYSYIVQNKSEANELSINELADKLDLSTSSIMTFTKKLGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +G+ L+ + + S + +D + T+ + S Sbjct: 61 EGYSELRYLIKWSEEEIQGSTFNDNEIEYTKND----------------INLTMTMMSSL 104 Query: 121 KLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 L L +A RI + G G VA+ + +G + V+ Sbjct: 105 NLDGLFESLNAAERIFVIGNGYVQHNVAEELKRNFLNVGKIVIIIDQASDYEQYVEMIGE 164 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+L IS+ G + L D + + +IT + N + R+ + + + E + Sbjct: 165 GDVLFVISFRGENKSLIDFLDRL-DKNVVIASITKLSNNTISHRSDYNIAFVTHEVFDFN 223 Query: 240 ASI-SACHAQGM-LTDLLFIALIQQDLELAPERIRHSEA 276 + + +Q + D + + + A + R ++ Sbjct: 224 QRMKISPVSQFYVVIDFIILKYLSFIERKARSKKREAQR 262 >UniRef50_D0J1V5 Transcriptional regulator, RpiR family n=2 Tax=Comamonas testosteroni RepID=D0J1V5_COMTE Length = 291 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 52/286 (18%), Positives = 112/286 (39%), Gaps = 14/286 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + R+R L S+++LA++LL P ++ ++A GVS ++V +F Q+LGY+ Sbjct: 15 SFIARVRAALPQLPPSERRLAEFLLDFPGNLSSYAAAEMAKLTGVSNATVTRFIQRLGYE 74 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + A A + + P V +++ + + T+ S ++ Sbjct: 75 GYEDAR---RHARAQGDNGSPLFLAAASAQGRPTADVIATHLRQASENLAVTIGQISAQQ 131 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMK-IGFNAAAVRDMHALL-ATVQASSP 179 L + L AR++ G + A W+L++ + + + L Sbjct: 132 LEDIALALIGARQLFFVGYRQNRNFAAYLRWQLLQALEMPSQVIPGAGETLGEYAAQIGE 191 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +D+++ + R ++ A + +G +++ IT + A L Sbjct: 192 NDVVVIFALRRSVRVVSEFARQARLLGARLICITDHA-SP-APEADWLLRVQTSAP---- 245 Query: 240 ASISACHAQGMLTDLLFIALIQQDLE---LAPERIRHSEALVKKLV 282 + A ML L+ A +QQ + I S + +++ Sbjct: 246 GPLDNHTALFMLCHLIATATLQQSGQPGRRHMAAIETSHDALDEML 291 >UniRef50_C2GZH1 RpiR family transcriptional regulator n=17 Tax=Enterococcus faecalis RepID=C2GZH1_ENTFA Length = 256 Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats. Identities = 37/253 (14%), Positives = 99/253 (39%), Gaps = 23/253 (9%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 L ++ ++ Y+ + +++ ++LA+E S++++ +F QK +G+ K L Sbjct: 14 PQLNPTELEIYKYISHNIEKVPYMTIRELADEIHFSKTAIWRFCQKFECEGYTDFKFKLK 73 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 L+ + ++ ++ + + E ++ + +L Sbjct: 74 NYLSERKKTAQPKSLDE---------------TMLIHFLQRSSEELLEGRIVQAAELLAK 118 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKI-GFNAAAVRDMHALLATVQASSPDDL----LLAI 186 ++ G G S ++A+ I +A+ H V S + ++A+ Sbjct: 119 KEFVLFIGEGTSKVLAEFGEIYFSSIYNLSASV---SHLFSHPVSKLSEETAKKVGVIAL 175 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S +G +++ D + +G V+AIT + + Q ++ + + ++ A +++ Sbjct: 176 SVSGETQKVRQNIDYFIEMGIDVIAITNSEKSTIAQLSTVTIPYYITTEKSSIADVTSQL 235 Query: 247 AQGMLTDLLFIAL 259 L + L + Sbjct: 236 PALFLIEKLAKTV 248 >UniRef50_Q1IJ92 Transcriptional regulator, RpiR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJ92_ACIBL Length = 291 Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats. Identities = 42/268 (15%), Positives = 103/268 (38%), Gaps = 6/268 (2%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 +R + L++ +L + +P LS + +A + G ++V++ + LG++ + K Sbjct: 19 ERMERLSKKRSELIRPVQERPRDYVLLSIRDVAAKLGTDPATVLRTVRGLGFESYREFKA 78 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L L+ + + + + L G + + ++ + A N ++ Sbjct: 79 YL-HQLSIASATSLDGMQAVSKPNSSLLSQGARALDQDLQNLQALRNTLDMNRIVAIARR 137 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + +AR+I++ G + +A+ + L +GF A + V++ DL+ AIS+ Sbjct: 138 VYAARKILVLGGDLAASLAEYLEYNLTLLGFTVVAGITPGKTINAVRSFDRHDLVFAISF 197 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 R+ + G + IT + + + + CL E ++ A Sbjct: 198 RRGLRQTVEGMKQARANGAYCVGITDSFVSPICRFSDECLLASIESHLG-----TSYAAP 252 Query: 249 GMLTDLLFIALIQQDLELAPERIRHSEA 276 L +++ + ++ + Sbjct: 253 MSLFNVMLTICAHYREARTMKTLKKLDQ 280 >UniRef50_C5EP41 RpiR family transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EP41_9FIRM Length = 287 Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats. Identities = 43/274 (15%), Positives = 101/274 (36%), Gaps = 11/274 (4%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L +++ADY + ++SS +A E GVS +S+++FA+ +GY GF LK + Sbjct: 12 KLTPQQRRIADYFFKNQERIGNMSSMDVAKEIGVSDASIIRFARAIGYLGFTDLKNDIYN 71 Query: 73 ALASQPESPSVPIH-----NQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 +L + + + + + G + ++ + T NS E Sbjct: 72 SLIGETSASVRNMQLSERFDVLTGRYQEDDIPGSFVEMMNYNITRTFQQNSLESYEALAD 131 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLA--TVQASSPDDLLLA 185 M+ +RR + G+ V+ +F L + +Q +D+ + Sbjct: 132 MIIRSRRKYVVGLRGCMGVSSHFTRLLGFAIKGVVQMPGSSETEVVGALQDIDSEDIFIL 191 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 S+ + L + ++ +T + Q A L + ++ Sbjct: 192 FSFARYYKIDMLLVNMAREHKARICVVTDSLMAPMVQYADIALLVETSHMSF----FNSA 247 Query: 246 HAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 M+ + + + +++ + +R + + + + Sbjct: 248 IGVDMIAEYIITLVCRKNKDEYRKRAKERDTVTE 281 >UniRef50_C9A4Z8 Transcription regulator n=4 Tax=Enterococcus RepID=C9A4Z8_ENTCA Length = 247 Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 100/257 (38%), Gaps = 26/257 (10%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ +I + L+++D+ + Y+ Q D ++ +++A E+ S SSV++F +KLGY Sbjct: 1 MSFFGKID--FNELSETDRAIYHYMSSQSDKIPYMRVREIALESHTSASSVMRFIRKLGY 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + F + + N + + R + K Sbjct: 59 ESFTEFRTQFK--VPELDAVSFYSSMNVLNAEHFPRDIEGK------------------- 97 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + II GIGASG + + A + IGFN+ A+ D + + D Sbjct: 98 -IRRIAERMLECDNIIFYGIGASGSMCEYAARRFATIGFNSYALVDNTYPIFAKLKHTSD 156 Query: 181 DLLLAISYTGVRRELNLAADEMLRV-GGKVLAITGFTPNALQQRASHCLYTIAEEQATN- 238 ++++ +S TG E+ + +AIT + L + + + L + + N Sbjct: 157 NMIVVLSITGTTTEIIEVVNGFRNNPDFTTVAITSDANSTLGRMSDYVLDYSVDVKRINK 216 Query: 239 SASISACHAQGMLTDLL 255 ++ L + L Sbjct: 217 YEDLTTQIPCLFLVEAL 233 >UniRef50_B9DVI9 RpiR family regulatory protein n=1 Tax=Streptococcus uberis 0140J RepID=B9DVI9_STRU0 Length = 258 Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats. Identities = 55/264 (20%), Positives = 111/264 (42%), Gaps = 16/264 (6%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ RI + L ++DKK+ + LL PD + + Q A S +++V+ A+K+GY Sbjct: 1 MDFKERISVNFTNLTKTDKKIYNCLLEHPDYLINHNVQDAAQLIETSPAALVRLAKKIGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG P LK+ L E+ + P + + K++ + + E Sbjct: 61 KGLPDLKIGLEESSQKNQKEPKRQ----------SKKIMSKVLNNYRDNIALLESQLDEG 110 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +LH L S+ I + GIG+SGL A+ + L+ ++ + + + + Sbjct: 111 QLHRIAKKLASSDLIKVLGIGSSGLSAEQLVYSLLYQDKYTESITSKTKMYYLSRTLTKE 170 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +LL + TG ++ + VG +V+ +T ++Q A+ + + + Sbjct: 171 HVLLFYTVTG-NKDFEELFEAAKAVGCQVIIVTMVDSPYIRQYATELIVLPSNVMQLRNP 229 Query: 241 S-----ISACHAQGMLTDLLFIAL 259 S + +L+++L + Sbjct: 230 SGDFYQLDNRSLFLILSEILAAYV 253 >UniRef50_C0VS80 RpiR family transcriptional regulator n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VS80_9CORY Length = 295 Score = 155 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 40/284 (14%), Positives = 97/284 (34%), Gaps = 12/284 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R++ + + ++ LADY + + S ++V +F +KLGY+ Sbjct: 13 LFERVQ-KISDMTPMERNLADYFTDAYPELAFKNLVDICEATQSSTATVTRFVRKLGYQN 71 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F L + ++S +SP + + + + T + E+ Sbjct: 72 FRDFSKQLRKEISSNFDSPLQRNSEIDDDPQSPGTLLFQHLARAQEDLQQTSRIVDCEEF 131 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF----NAAAVRDMHALLATVQASS 178 ++ A R + S ++ +G N + + + + + Sbjct: 132 ELIADLISDADRSLFL---NSSATGKDLLHYFYLLGKYHRPNLFFLPGIDMVPHELVDGN 188 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D +LL ++ ++ +GG+ + IT L++ + H L + Sbjct: 189 KDSILLTTNFDRHPIQVQSVMRAFKEMGGETILITNRQAGVLRRYSDHVLLVPSSSDF-- 246 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 + + ++ + L A+ + + R + E L++ V Sbjct: 247 --RFKSRSSMLVVLESLLAAMESRYPDRVKARTKKMEGLMEDFV 288 >UniRef50_Q09KH2 FitR n=27 Tax=Proteobacteria RepID=Q09KH2_ECOLX Length = 295 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 50/273 (18%), Positives = 102/273 (37%), Gaps = 4/273 (1%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 R R R L + +A Y+ + ++ ++A S ++V++ Q LG+ G Sbjct: 14 ERFRTRASQLTPGLRVVASYINEHREVVLEQTAMEIAATLNTSDATVIRAIQALGFAGLR 73 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 LK L + L S + + +++ + + L + Sbjct: 74 DLKRTLEQWLGPALSSSEKMSTTVSNLTSDVNTAIDFVLEGHLYTCNVLSEPENRHALAQ 133 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSPDDLL 183 V +L AR++ + GIGASG++A A +IG A A+ L + A D+L Sbjct: 134 AVALLVQARQVAIFGIGASGILADYTARLFNRIGLPATALNRTGIGLAEQLIALQRGDVL 193 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + ++ RE E R+G V+ +T + + AS ++ + Sbjct: 194 IMMAQKSAHREGLTTLREARRLGIPVILLTNALDSRFSKDASIVIHVP---RGDEKGKTP 250 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + +++ ++ + A + I+ Sbjct: 251 LHGTVLLCLEMIVWSVASAVPQRAVKTIKRIND 283 >UniRef50_B2V3J2 Transcriptional regulator, RpiR family n=2 Tax=Clostridium botulinum E RepID=B2V3J2_CLOBA Length = 258 Score = 154 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 53/273 (19%), Positives = 98/273 (35%), Gaps = 20/273 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + + Y L ++DK + Y++ D+ LS + A++ VS +++ +FA+K+ Sbjct: 1 MRIEELMNRYYSDLNENDKFICKYIINNKDSCYKLSIDEFASKCNVSNTTLFRFAKKISL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK L + ++ + T + + + Sbjct: 61 PGFSELKARLRLEVETKNNEKID------------------FLSTVTESYHKVVEYIKNR 102 Query: 121 KLHECVTMLRSARRIILTGIG-ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + A+RII+ G G A V F + + A ++ Sbjct: 103 DCTNIFEKMYKAKRIIVYGNGYAQARVTSEFKRIFLPTEKTIFNMHGYDMAKAVEALANE 162 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD ++ IS +G +++ A+ + G L+IT N L LY + N Sbjct: 163 DDFVIIISLSGESKDVIKLAEALRLKGISTLSITKMINNTLAGFCEENLYINSIPLPRNY 222 Query: 240 A-SISACHAQGMLTDLLFIALIQQDLELAPERI 271 +L +LLF+ + EL I Sbjct: 223 VLDYEISTPYFILIELLFLKYQKYLSELYSVHI 255 >UniRef50_A6UKE0 Transcriptional regulator, RpiR family n=4 Tax=Alphaproteobacteria RepID=A6UKE0_SINMW Length = 299 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 57/275 (20%), Positives = 102/275 (37%), Gaps = 13/275 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RIR+ L S++K+A+ +L + Q+LA + GVS S+ +F K+G G Sbjct: 9 IRTRIREAAAQLTASERKIANAILADYPFTGLENIQELAAKTGVSAPSITRFVNKIGCGG 68 Query: 63 FPALKLALSEALASQPESP--SVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F L+ L L SP + D L ++ +A M + S+ Sbjct: 69 FQDLQRQLIAELKEGRRSPLDLKSSQKPVGHSDFLSEYVARV----SAVMREMTGMVSQA 124 Query: 121 KLHECVTMLRS-ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASS 178 + + +R I L G S +A + L +I + D V Sbjct: 125 QFDILAELFADPSRNIFLLGGRVSDSIASFLSIHLRQIRSGIYHMADNPEFWPEHVLRMR 184 Query: 179 PDDLLLAISYTGVRRELNL-AADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 D++L I + + L AA+ + G ++ +T + + A H + E Sbjct: 185 RKDVVLLIDFRRYQLSLARLAANIAEKRGATIVVVTDKWMSPAARSADHIVALPIE---- 240 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIR 272 + A L + L + + + D +RI+ Sbjct: 241 AGTAWDTVAAAMALVEALIVRVSEADWGATQKRIK 275 >UniRef50_D2BPU5 Transcriptional regulator, RpiR family n=4 Tax=Lactococcus lactis RepID=D2BPU5_LACLK Length = 251 Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 108/258 (41%), Gaps = 22/258 (8%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + + ++ + L + + +++L + +S +QLA VS ++V++ +KLG++G Sbjct: 1 MIDFLPEQVRTLNELETATFNFILSNLSSIDKMSVRQLAQAVHVSTATVMRMTRKLGFEG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + LK L E P N ++ D LR + K KL Sbjct: 61 WVELKYYLKNQ-NQLTEIPVNYYENLLQLDLFLRKITSKEAGR---------------KL 104 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 E V ++R AR II G+G+SG +A+ A IG + A+ D + + +PD L Sbjct: 105 EEAVKLIREARYIIFIGVGSSGALAEYGARYFTNIGLESYAISDPYQAVK--GKGAPDVL 162 Query: 183 LLAISYTGVRRELNLAADEML-RVGGKVLAITGFTPNALQQRASHCLYTIAE---EQATN 238 + +S +G ++ ++ K+++IT L + ++ L + Sbjct: 163 SIVLSASGETDKIIERVVKLREEAPAKIISITNHPETTLSKLSNINLTYGFQTEYSAYDP 222 Query: 239 SASISACHAQGMLTDLLF 256 ++++ ++L Sbjct: 223 LENLTSQLPVIAFIEILA 240 >UniRef50_C7TGE4 Transcriptional regulator, RpiR family n=4 Tax=Lactobacillus RepID=C7TGE4_LACRL Length = 270 Score = 153 bits (389), Expect = 4e-36, Method: Composition-based stats. Identities = 57/277 (20%), Positives = 107/277 (38%), Gaps = 23/277 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I Q+Y L QSDK++ +++ + R+ S ++A ++ S+S++ + QK+G Sbjct: 1 MQLESLINQKYTSLNQSDKEILTFIVKNREFVRNSSLSEVAAKSLFSKSAIFRCCQKIGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF L+ L+E S +S S + + + +M T+N Sbjct: 61 TGFSQLRYVLAEEQESDQDSLSNVDY----------------LAQTVKSMLWTVNQFKST 104 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWK-LMKIGFNAAAVRDMH-ALLATVQASS 178 + L +A I + G + + L IG A H + + Sbjct: 105 NVEGIYATLENAGTIYIYSTGWQQQIMAQQLQRDLYLIGKFAFLFPTGHDEMQLSSTKIK 164 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P D+++ ISY G+ + + + G ++++ T F N L Q A++ LY + Sbjct: 165 PGDVVIVISYKGMNATIVQLVNNLKLNGVQIVSFTSFRQNRLAQAANYNLYYDVINKTIG 224 Query: 239 SASISACH--AQGMLTDLL---FIALIQQDLELAPER 270 + +L D+ F + E E Sbjct: 225 ADKKVERFFANLTLLIDIFSMGFANYLAAQEERTREH 261 >UniRef50_C3RLZ2 Transcriptional regulator n=3 Tax=Bacteria RepID=C3RLZ2_9MOLU Length = 251 Score = 153 bits (389), Expect = 4e-36, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 93/271 (34%), Gaps = 22/271 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + + YQ L +D + +Y++ LS +LA VS+S++++F+++LG Sbjct: 1 MKLEELVNRNYQQLNDNDLYIWNYIIHHRKECERLSIDELALRCSVSRSTILRFSKRLGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG+ K+ L ++ + + + + + Sbjct: 61 KGYAEFKVFLRIDNQKNDKN----------------ALTDNIFNHYIETLEQYRDY---- 100 Query: 121 KLHECVTMLRSARRIILTGIG-ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E V + A+ + + G G AQ+ + + + A + Sbjct: 101 HYKEIVQSIYEAKNLYVYGTGVIQDNTAQHLKRSFSMVNKLFLDIDVLADFEAYINLFGS 160 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +D+ +AISY G + L + G V+AI L A + L+ TN Sbjct: 161 NDVFIAISYAGENQRLLDYVYRLKAKGVIVVAIIANNDCTLSHVADYSLHVKTLPVMTNQ 220 Query: 240 ASISACHA-QGMLTDLLFIALIQQDLELAPE 269 +L D + I+ E Sbjct: 221 GRREDLVGNYFILIDFIIANYIEYAKSRGNE 251 >UniRef50_D1AJC9 Transcriptional regulator, RpiR family n=4 Tax=Bacteria RepID=D1AJC9_SEBTE Length = 248 Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 102/261 (39%), Gaps = 17/261 (6%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + + L S++++ Y+ + +S +A E S ++V + +K G G Sbjct: 2 IIQLNDKIKSKLTSSEEQVIKYINENDNKLVDMSIVDIAEETFTSPATVSRAIKKCGVNG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F L+ LS+ S ++ ++ TL S ++ Sbjct: 62 FMELRYNLSKRKEEINSSKD----------------INEIFSKSLIETRQTLENISVNQI 105 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 E + +++ +++II+ G S LVA F+ KL + FN + D + + + ++ D L Sbjct: 106 LEIIELIQKSKKIIVIARGLSELVATEFSLKLELMDFNVFNISDPNIMKKFSREANKDHL 165 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY-TIAEEQATNSAS 241 +A + G +++ V+A + + L++ + H + + Sbjct: 166 YIAFTLKGEDQDILTTIKNAHLRDANVVACSCGSNKELRKYSDHIILGYKHSNISIKKFE 225 Query: 242 ISACHAQGMLTDLLFIALIQQ 262 +++ +++ ++ L+ Sbjct: 226 VTSRLPLFVISRVILDYLVMN 246 >UniRef50_B0NY53 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NY53_9CLOT Length = 266 Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats. Identities = 46/278 (16%), Positives = 102/278 (36%), Gaps = 21/278 (7%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N I++++ L ++D ++ Y++ + + +S QQLA VS +++++FA+KLG+ Sbjct: 5 NMEELIQKKFDILNENDLQIWAYIVRHKEQCKQISIQQLAVFCHVSHTTILRFAKKLGFS 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ ++ L ++ + A + ++ Sbjct: 65 GYSEMRSFLKWEDKAEILYEEKDMDRN--------------ANSFIANIRRFEDM----D 106 Query: 122 LHECVTMLRSARRIILTGIGASG-LVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + M+ SA RI G G++ L AQ+ K + G + + + + Sbjct: 107 MDKVCQMIESASRIYTQGSGSTQKLAAQHLKEKFLYQGIFINTIEGASEFEFLSEKFTEE 166 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE-QATNS 239 DL++ S +G + G K++ I A L +EE Sbjct: 167 DLVIFYSLSGQNEKQIRKMRSAKESGAKIIGIAMQGKGEFYDLADEVLTFQSEEIHTIGY 226 Query: 240 ASISACHAQGMLT-DLLFIALIQQDLELAPERIRHSEA 276 + + + L + ++ L+ ++E Sbjct: 227 GFLYYPTLHFHIVNEFLTLKYMEHQLKKQEAITENNEE 264 >UniRef50_D0Z271 Transcriptional regulator n=6 Tax=Vibrionaceae RepID=D0Z271_LISDA Length = 285 Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats. Identities = 42/283 (14%), Positives = 101/283 (35%), Gaps = 10/283 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I +Q + ++++++ Y + +L + GV ++++ +F Q+LG+ Sbjct: 5 DFIDAIN-HFQSMTDAEQRISQYFMANYSVLPFAKIDELCKQIGVGKATLGRFLQRLGFV 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQI-RGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF K ++ L +P + + E + + T + ++E Sbjct: 64 GFIDFKKQVTAELTHTLTTPIERYETDNGDLGSSENNLLAQHHTEVLSNLDKTFHNITDE 123 Query: 121 KLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASS 178 + + ++R + ++ + G +S +A F + + D+ L + Sbjct: 124 QFESALELMRQPKGKLYVMGSASSEALATYFYLLARYLRREVILIEADISKLPHQLVDVG 183 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 DD+L AISY + GG ++ +T N + + Sbjct: 184 KDDILFAISYHRYSSVTVRLVKWFHQHGGSIIIMTDQAVNPFAAYSDIQFVVESA----G 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + A + + L L + R + E L ++ Sbjct: 240 NGFFNNRTAGFAVIEGLIKGLSIHKEKEN--RFQRIEGLFEEF 280 >UniRef50_B6QWT3 Putative transcriptional regulator protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QWT3_9RHOB Length = 292 Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats. Identities = 50/287 (17%), Positives = 104/287 (36%), Gaps = 19/287 (6%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 + ++ + Y L++ KK A Y+L P LS +Q+A A V ++ + A+ L + + Sbjct: 9 IDQLTKAYPNLSKQLKKSAAYVLEYPSDVATLSMRQVAARAEVPPPTMNRLAKSLEFDTY 68 Query: 64 PALKLALSEALASQPESPSVPIHN--QIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 A++ + G + + + + + Sbjct: 69 NAMRDVYRGGFEDFSSNYPSRAGELQATHGTSDIEASLQSFKSAAIGNLKHLFDTIDRDH 128 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAW-------KLMKIGFNAAAVRDMHALLATV 174 L + ++ L +AR +++ G+ AS +A + I + V Sbjct: 129 LQQIISSLATARNVVVVGMHASHSLANYLHYVASMCFRNWRLINRR------NGEIADQV 182 Query: 175 QASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE 234 + + DD+++AIS + L A VG KV+ IT + L ++ L T + Sbjct: 183 EYINADDVVVAISLNPCAADTVLVAKRAYEVGAKVIGITDTRTSPLATYSTDLLLTPVQS 242 Query: 235 QATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + A L +++ L+ ++ + I E +L Sbjct: 243 PHF----FESYVATAALLEMILGFLVADSGQVVIDNITRLERCRNEL 285 >UniRef50_C9XQF1 Phosphosugar-binding transcriptional regulator n=5 Tax=Clostridiales RepID=C9XQF1_CLODC Length = 250 Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats. Identities = 43/266 (16%), Positives = 103/266 (38%), Gaps = 18/266 (6%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + + + L +++ ++ ++ LS ++A+E S ++V + +K G G Sbjct: 2 IIELNKSNSENLTKTELEIIKFINENESILPELSIVEIAHETYSSPATVSRAIRKCGLNG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F L+ L +D ++ +G+ + K A + S L Sbjct: 62 FNELRYRL----------------TVKDENDDIQNMGDIINKSFIEA-QRVIEQISLTTL 104 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + + +I + G + VA+ F+ KL + FN + D + + ++ D+L Sbjct: 105 INIIKTINKSSKIYILARGLTEYVAKEFSLKLQLLDFNVVFINDPNIMKIKSKSIKKDEL 164 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ-ATNSAS 241 ++ S G EL +A VG KV+ L + + + E + + Sbjct: 165 IIIFSLNGNTIELVESAQNANLVGAKVITCCCSESAKLIKYSDLYIVGYKHEHISISEYE 224 Query: 242 ISACHAQGMLTDLLFIALIQQDLELA 267 +S+ +++ ++ +++ + Sbjct: 225 VSSRLPLYIISRIIIDYMVRYNNSEN 250 >UniRef50_C9A974 Transcription regulator n=4 Tax=Enterococcus RepID=C9A974_ENTCA Length = 252 Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 109/262 (41%), Gaps = 20/262 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M ++ L+ ++++ +++ + ++ + +A++A VS +SV +F QK+G+ Sbjct: 1 MALFEQL--NLNKLSAVEQEIYRFIVNHLEKIPYMRVRDIADDAHVSSTSVFRFIQKVGF 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + FP + + L + + ++ + ++ + Sbjct: 59 QSFPEFRFYIKNHLEKAHFDAHP---EHLGLEARIKGLNMQIFHPDAEY----------- 104 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ + +R A I+ G+GASG +AQ A KL +G+ + ++ ++ + + Sbjct: 105 QIRKLAEAMRDADLILFMGMGASGAIAQYVARKLASLGYFSISIDELTYPIKSFLRKDQK 164 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKV--LAITGFTPNALQQRASHCL-YTIAEEQAT 237 ++L+ +S +G +EL + V IT + L + + + Y I EE+ Sbjct: 165 NVLVFLSVSGETKELIEVITGL-DNQAIVQKYCITPNRESTLARLCDYSIEYAIKEERKD 223 Query: 238 NSASISACHAQGMLTDLLFIAL 259 +++ + + L L Sbjct: 224 IFLDLTSQLPSVAILETLIGYL 245 >UniRef50_C8SN57 Transcriptional regulator, RpiR family n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SN57_9RHIZ Length = 301 Score = 152 bits (386), Expect = 9e-36, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 111/274 (40%), Gaps = 7/274 (2%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 +I + G++ + A Y+L +P+ LS ++ A +AGV +++ + AQ LG G+ A Sbjct: 9 QIVSAFDGMSAQLQSAARYVLDRPEDVALLSMREQARQAGVQPATMTRLAQYLGLDGYEA 68 Query: 66 LKLALSEALASQPE--SPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 ++ + A+ S+ + + + + +++ + ++ E+L Sbjct: 69 VRDIHAAAVRSRGVGFAGKAGVQVASQRLKGDHALVADMLRSLAGQIAHLAEPSTIERLV 128 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG-FNAAAVRDMHALLATVQASSPDDL 182 L +ARR+ G+ +S VA + + L IG + + ++ +DL Sbjct: 129 TTAKALTAARRVYCLGMRSSHAVAWHLHYILSLIGEKSVMLHGAGGTDGDVLGRATGEDL 188 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L+A S R A+ G ++A+T L Q A H + + Sbjct: 189 LIAASVLPYTRLTIELAEYAAGRGVPIVAVTDSEVAPLAQLADHLIIVPTASPSF----F 244 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 +++++L + Q E A E +R + Sbjct: 245 HTMTQAFIVSEVLGALVAGQAGEGAIEALRRFDE 278 >UniRef50_A5LQQ9 Phosphosugar-binding transcriptional regulator, RpiR family protein n=3 Tax=Streptococcus pneumoniae RepID=A5LQQ9_STRPN Length = 203 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 84/198 (42%) Query: 82 SVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIG 141 + I +++ + + +T + ++ + ++R A +I++ G+G Sbjct: 2 TKDILELESQKMSSDTFIDEIKNNYLSIVESTRKLIDGRQIELAIKLIREANQILMIGVG 61 Query: 142 ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADE 201 +SG A+ F L++IG + V D H L +DL++A S +G +E+ Sbjct: 62 SSGNAAREFESSLLRIGIISKTVIDTHFQLMHTALLKDNDLIIAFSLSGSTKEVEETLLN 121 Query: 202 MLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQ 261 R K+++IT ++ + + + L T +E S+ A +Q + D++ L Sbjct: 122 AKRKNVKIISITNYSSRNIAKLSDCVLLTSKKESYLEGGSLMAKASQLFIIDVICTRLSL 181 Query: 262 QDLELAPERIRHSEALVK 279 + E + +L+ Sbjct: 182 INYEDTICKKEEIASLLS 199 >UniRef50_Q46SK2 Transcriptional regulator, RpiR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46SK2_RALEJ Length = 313 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 50/277 (18%), Positives = 102/277 (36%), Gaps = 8/277 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + +I L +S+++LA L S+ +LA +AGVS+++ +F ++LGY+ Sbjct: 35 SLQDKILALNDQLTESERRLAAVTLECIGNLAAYSATELAQKAGVSKATAGRFFRRLGYE 94 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F ++ + + + + + + + + T + + Sbjct: 95 NFNEVRALVRDEADRGSPLYELAGVQAPTENQTP---LARHLANDLQNLAQTFDRLNPAD 151 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSPD 180 + V + +R+ + G ++AQ L ++ V L + Sbjct: 152 VERAVALFADTKRVFIAGFRNGRVLAQYAWALLTQLRPGVTLVPGAGLNLAEDLADLGAG 211 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+LL + + L RVG KV+ +T + L R+ L + +A Sbjct: 212 DVLLVMDFRRRVTLLWPMVAHANRVGAKVVILTDPSATDLPARSDVVLRCVNH----GAA 267 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + A L + L L + A ER+ E+L Sbjct: 268 VFDSYVAAVSLINHLCTNLALVLGDTARERLEEIESL 304 >UniRef50_A6WYS0 Transcriptional regulator, RpiR family n=4 Tax=Rhizobiales RepID=A6WYS0_OCHA4 Length = 280 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 55/284 (19%), Positives = 114/284 (40%), Gaps = 14/284 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L R+R L ++K+L +++ P S+ +LA A VS ++V +F Q+LGY Sbjct: 7 SFLTRVRDVMDELPPAEKRLGEFVCDFPGELASYSASELAALAHVSNATVTRFVQRLGYD 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + + + ++ S + + + + + + A + T E + Sbjct: 67 TYEESR----RHAREEKQTGSRLFLSSATDAESGQSLSSHVGQG-IANLEKTFLSIRETQ 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL-ATVQASSPD 180 + V + AR+ + G +S A W+++++ N AV L + + SPD Sbjct: 122 IDAVVEAMLGARKTWVFGFRSSQPFAAYLQWQMIQVVDNIVAVPGPGQTLGEYIASISPD 181 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ + +++ + + G K+L IT + A + Sbjct: 182 DMVIVFALRRRIAKMDDILAAIEKRGAKLLYITD-EGAPFRASAQWHFHCQT----LAPG 236 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA---LVKKL 281 + A L LL I++ +R+R EA L+++L Sbjct: 237 PLFNHVAVMALCHLLTTRAIEKAGASGRKRLRDIEASGDLLEEL 280 >UniRef50_C2ECD8 Transcriptional regulator n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2ECD8_9LACO Length = 252 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 99/262 (37%), Gaps = 21/262 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ ++ + L+++DK++ YL A + S +L S+S+V++ A+KLG+ Sbjct: 1 MSFEDNVKMHFDELSENDKEIVRYLQQNMADAINSSIIELGEATLSSKSTVLRLAKKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GF LK L + + + L ++ + T + + Sbjct: 61 RGFSDLKFQLEQDYKADKI------------------IPTDLEQQLHHDIGKTFEYSHQV 102 Query: 121 KLHECVTMLRSARRIILTGIGAS-GLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + + A + + G S A+ F+ L+ G + + + Sbjct: 103 NFQPLIEAIHDASNVYIYPTGFSQQNFAREFSNDLLIAGKKNYLLDGTTNFDRVTRKLNQ 162 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT--IAEEQAT 237 +D ++ +S +G + A + +IT F+ N L + A++ L+ A Sbjct: 163 NDFVIVVSLSGNTPLIKNAIKMLNFRKVPFFSITEFSRNYLSEHANYQLFYEASVIPTAE 222 Query: 238 NSASISACHAQGMLTDLLFIAL 259 +S+ + ++ +L Sbjct: 223 PGDKMSSMTSLPIILGILSRKY 244 >UniRef50_Q2BDH7 RpiR-family transcriptional regulator n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BDH7_9BACI Length = 266 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 91/252 (36%), Gaps = 9/252 (3%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L+QS+ + +L+ + + LS + A+E VS +S+++ +KLG+ G+ L Sbjct: 16 DLSQSEMDILSFLIKRKFEDKPLSIRNAADELYVSTTSIMRLCKKLGFSGYSEFIFNLGL 75 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 + + +S + + E+ +E ++ E + + + + Sbjct: 76 KIKNAHDSDHGSVVE-------IHSPLEESRQEFVRNFNSSFEALDENSIQAFLAEIEKS 128 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVR 192 +I G G S L + + KL G+ + + D+++ S +G Sbjct: 129 SKIYFYGAGFSTLFSNYLSKKLELFGYYVSNASTSDSRAIFFNNIQKYDVMIVFSRSGET 188 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT--IAEEQATNSASISACHAQGM 250 ++ G + + TG + + A E S M Sbjct: 189 GKVIEKMKIAKDKGIRTVLFTGNSRSTTANLADIVFSVLDPTIESQQEFQVTSYESNMFM 248 Query: 251 LTDLLFIALIQQ 262 + D++ I I++ Sbjct: 249 MIDIILILAIKK 260 >UniRef50_C5J6W4 Transcriptional regulator n=1 Tax=Mycoplasma conjunctivae HRC/581 RepID=C5J6W4_MYCCR Length = 278 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 51/274 (18%), Positives = 112/274 (40%), Gaps = 9/274 (3%) Query: 8 RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALK 67 +++ + L +++++ D L P + S ++LA ++ VS S + +KLG+ ++ Sbjct: 8 QKQIESLTTAERQIIDLSLKNPVFFYNASIKELAKKSNVSMSVISLLTKKLGFDSLKNMQ 67 Query: 68 LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 + + + + + + ++L ++ T ++ + + Sbjct: 68 FYVYHHYLNSK-------NILLDSNSENSKILDQLHFYYRDSITKTAHLIDLNSISKISE 120 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAIS 187 + +A +I L G G+S L A A L K+G NA + D H+ L T + + ++ S Sbjct: 121 TISNANKIFLYGAGSSSLAASELAINLQKLGLNATSFFDFHSFLLTSGQ-NQESTIILFS 179 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHA 247 + +E+ ++ G ++ IT + Q + L EQ SIS+ Sbjct: 180 KSCKTKEIEFIIKQLGDKGENLIIITANKQ-VIHQEKNQVLIYQTLEQKQRFISISSKVN 238 Query: 248 QGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 Q ++DL+F L ++ + L+ Sbjct: 239 QYFVSDLIFFILANSMDIKYQQKYEQNYFLLNNW 272 >UniRef50_A1WL40 Transcriptional regulator, RpiR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WL40_VEREI Length = 285 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 60/275 (21%), Positives = 112/275 (40%), Gaps = 8/275 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + QR+ GL + A +L+ P+ A + + L+ AG+ S +++ A+ LGY G Sbjct: 13 LKELVTQRFDGLPVRLQAAARHLVDHPNAAAVDTIKSLSGAAGLQPSVLMRLAKTLGYSG 72 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLR---LVGEKLIKENTAAMYATLNVNSE 119 F ++ +AL SQ +S + + R + + L + + ++ + Sbjct: 73 FSEMQSVFRDALLSQTQSYGERMRTRGRRATAPQASGDMLRLLCEGSIESLQGLRDAIDA 132 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLA-TVQASS 178 + L + + +L AR I + G+ + +A + L + + M +L VQA Sbjct: 133 QSLRDAIEILAGARSIHVLGLRRAWPIATYLVYLLSRSRRVVRLLGGMAGMLPDEVQALQ 192 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P D+L+AIS+ + A + G V+A+T + + A L E Sbjct: 193 PGDVLVAISFHPFHADTVAAVERAHAQGVSVVALTDGALSPFARHARTVLEVRDAE---- 248 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRH 273 A A L L + L+ ++ A RH Sbjct: 249 IAGFRTVAASMALCHGLAVGLVMKEESGAARGKRH 283 >UniRef50_C8WCY0 Transcriptional regulator, RpiR family n=3 Tax=Zymomonas mobilis RepID=C8WCY0_ZYMMN Length = 305 Score = 150 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 52/282 (18%), Positives = 112/282 (39%), Gaps = 10/282 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + I Q + Q+++++A L A + +L +A VS +V++F KLG+ Sbjct: 12 NLAILIHQASENFTQAERRIAQILFASDMMAGLETVAKLGAKAKVSGPTVLRFVSKLGFS 71 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKEN----TAAMYATLNVN 117 FP + +L L + + + R +++E M+ TL Sbjct: 72 SFPEFQASLRGELYQKLIYNTPQNQDDTANHVSDRPAVASVLQEADSFFENCMHRTLQQI 131 Query: 118 SEEKLHECVTMLRS-ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQ 175 + +L + +L +R + + G + +A+ F ++L ++ V + + Sbjct: 132 NACELEDVTELLADCSRNVYIVGNHLTHPIAELFWYQLHRLRPRTHLVQNNAFTPYEQLI 191 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 S D+LL + ++ L A++ + ++ IT + + + A H L Sbjct: 192 DSGRRDILLLFDICHYQEDIALLAEQAHQRRTTIILITDPKLSPVSRLAHHVLTC----D 247 Query: 236 ATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 T S + ++ +LL +L ++ A R ++ E Sbjct: 248 FTLFTSHESLVPCLVMVELLAASLEKKLGADALIRQQNIEKA 289 >UniRef50_B8IEA9 Transcriptional regulator, RpiR family n=4 Tax=Rhizobiales RepID=B8IEA9_METNO Length = 296 Score = 150 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 56/282 (19%), Positives = 108/282 (38%), Gaps = 10/282 (3%) Query: 1 MN---GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQK 57 M+ I ++ L + A ++L P+ LS ++ A AGV S+ + AQ+ Sbjct: 1 MDHGPLTDEIVATFETLGPQLQAAARFVLEHPNDVALLSMREQARRAGVQPHSMTRLAQR 60 Query: 58 LGYKGFPALKLALSEALASQPESPSVPIHNQI--RGDDPLRLVGEKLIKENTAAMYATLN 115 LG G+ ++ + A+ S Q+ + R + ++I A + Sbjct: 61 LGLPGYDDVRALYAAAVREGSLGFSGKAGTQVAHQKAKGERALAAEIIASVHAQIGRLTE 120 Query: 116 VNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATV 174 + ++L L SA RI G+ + V FA+ + +G A + L + Sbjct: 121 PPALDRLVTAAGRLASAERIYCLGLRSCHPVVAQFAYVMSFLGERAVLLDAGAGTGLDPI 180 Query: 175 QASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE 234 ++++ D+LLA S R A G V+A+T + L A + + Sbjct: 181 RSATTRDVLLAASIAPYTRATIETAQYADNQGVPVVAVTDSLVSPLAGVARETIVVPTDS 240 Query: 235 QATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + ++ ++L L + + + IR +EA Sbjct: 241 PSF----FHTVAPAFVVGEVLAALLAGRGGQASLAAIRRTEA 278 >UniRef50_B9R3N6 SIS domain protein n=3 Tax=Alphaproteobacteria RepID=B9R3N6_9RHOB Length = 302 Score = 150 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 46/275 (16%), Positives = 100/275 (36%), Gaps = 9/275 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L + + L +K A Y+L P+ S +++A+ AGV ++ V+ A+ +G++G Sbjct: 14 VLDDLAAELEVLTPELRKAASYVLENPNDVGVSSIREIADAAGVKPNTFVRMARSVGFEG 73 Query: 63 FPALKLALSEALASQPESPSVPIH--NQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + + EA+ S+ + L + ++ + + T Sbjct: 74 YEDFRQPFREAIRSRGTDFPDRARWLQSLSKGGQLGELFAEMAACAISNIENTFAATDAN 133 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAA--AVRDMHALLATVQASS 178 + + +AR + G+G + A+NF + L + + R + + Sbjct: 134 AMKAAADAIVNARHTYVLGVGVNNSNARNFTY-LADMAVDTIWTIPRMGSVATDDLARAD 192 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D+LLA++ R ++ A + G ++AI+ + + + H AE Sbjct: 193 KRDVLLAMTCKPYRTDVIEAVEVAREQGLTIVAISDSPASPIVVGSDHAFIIDAETPQF- 251 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRH 273 + + L + L +I I Sbjct: 252 ---FPSSVSTIALLETLLAFVIADAPPDVVANIEK 283 >UniRef50_B9QTZ2 SIS domain protein n=2 Tax=Labrenzia RepID=B9QTZ2_9RHOB Length = 287 Score = 150 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 56/284 (19%), Positives = 103/284 (36%), Gaps = 12/284 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 I Y L+++ + ADYL S + +A +GVS +S + A+ +G+ Sbjct: 8 IRAAITANYADLSETLRTAADYLADNQLEIATRSLRAIAAASGVSPASYTRLARAIGFSD 67 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + AL+ L+ + S D + + + A ++ +L Sbjct: 68 YEALREQARMELSQRGSSFQDKARQLRNEADQP--LLPRQAAACVDNIKALVDDIDPVRL 125 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLA--TVQASSPD 180 + V L ARR ++ G AS A FA+ ++ V + + + + D Sbjct: 126 EQVVDCLSKARRTVVVGALASAGFADYFAYLANWFN-DSWIVAGRNGASLGGALASLTKD 184 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D ++ +S AA+ G KV+ +T Q A H E Sbjct: 185 DCIVIVSKHPYAHRSVRAAELAAENGAKVIVLTDSHAFPGLQFADHHFIQRTESPHF--- 241 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIR---HSEALVKKL 281 S+ A +L + + L+ + A RI+ L+ +L Sbjct: 242 -FSSYAATLVLIETITGMLVARAGSEAEARIQNVDRHNRLLDEL 284 >UniRef50_C2BXZ0 RpiR family transcriptional regulator n=4 Tax=Bacilli RepID=C2BXZ0_LISGR Length = 251 Score = 150 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 36/259 (13%), Positives = 92/259 (35%), Gaps = 17/259 (6%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 L+ D ++ Y+ + + + LA S +S+++F +K GF K+ L Sbjct: 8 PELSNIDVEIYKYVTSHLEKVVLMRIRDLAKATHCSTASILRFCKKFDCAGFSEFKIKLR 67 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 L E P ++ + + +E++ +L Sbjct: 68 IYLEEMEEIPKTHTVDE---------------SAFMNFIQRSSESFYQERIDAAADLLAD 112 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM--HALLATVQASSPDDLLLAISYT 189 ++ G G+S ++A+ A I A ++ D H + + + ++A+S Sbjct: 113 KDLVVFIGSGSSNIIAEYGALYFSSIFSMAFSIEDPENHPVSFFNKGLAEKTCVIALSVG 172 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQG 249 G + + + + +++IT + + + + + ++ + I++ Sbjct: 173 GKTKSITNYLNHFIESNSSIISITNSANSTIARLSDINIPYYISTESIGDSDITSQVPAL 232 Query: 250 MLTDLLFIALIQQDLELAP 268 + L + ++ E A Sbjct: 233 YTVEYLAKEVRKKKAESAK 251 >UniRef50_Q98JM0 Mlr1883 protein n=2 Tax=Mesorhizobium RepID=Q98JM0_RHILO Length = 297 Score = 150 bits (380), Expect = 4e-35, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 89/253 (35%), Gaps = 6/253 (2%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 + +++A ++ P + Q+A +AGV S++V+FAQ GY GF + E Sbjct: 49 HFPKRLRQVAIFMWQHPSDVALGTIAQVAAQAGVQPSTLVRFAQIFGYSGFSDFQGLFKE 108 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 + ++ + + ++ + A++ E + VT+L +A Sbjct: 109 HVKGSWPEGRGEPRTEVEPNAAMH-FLHGMVGASQASLGRIETGFDVESFEKMVTLLAAA 167 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIG-FNAAAVRDMHALLATVQASSPDDLLLAISYTGV 191 I + G + V + L + G N + L V D +LA+S++ Sbjct: 168 ELIYVIGSKRAFPVTAYLSLTLSQQGVRNVLVDNVGSSALDQVGCIGSRDAVLAVSFSPY 227 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGML 251 +++ IT T + L + L + E A + A + Sbjct: 228 NSITPDLVAVAHERKARIVTITDSTFSPLIALSDSWLEVV--ESDF--AGFRSLAASLAV 283 Query: 252 TDLLFIALIQQDL 264 L + + Sbjct: 284 GMALVQGVAAKRG 296 >UniRef50_UPI000196ADBA hypothetical protein CATMIT_01190 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196ADBA Length = 252 Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats. Identities = 52/260 (20%), Positives = 103/260 (39%), Gaps = 19/260 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + Y L+ ++K + Y+ + +LA S+SSV++ AQKLGY Sbjct: 3 MDFDTQAGLIYSTLSDNEKDMIQYIRNHKSDVVEMPINELAKVLLSSKSSVLRLAQKLGY 62 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ LK +L + + + P+ L+++ + T S+ Sbjct: 63 TGYSELKYSLKKDIVKKAVVPTD------------------LVEKFRKEIDKTFEYASQV 104 Query: 121 KLHECVTMLRSARRIILTGIGASG-LVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++ + AR++IL G + + F+ +L G + V + + Sbjct: 105 NFATLISEIHKARQVILYATGFTQNNYTKQFSSELFMSGRSNYIVSGETNFEVISHSLTS 164 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD ++ IS +G + +E+ +L+IT N L + + + LY E Sbjct: 165 DDFVIIISLSGNTPGIRTIVNELNMKDIPILSITELGKNFLVENSDYQLYYNTTEFPLED 224 Query: 240 ASISACHAQGMLTDLLFIAL 259 I + +A G++ +L Sbjct: 225 EHIISMNAVGIILTILARKY 244 >UniRef50_C5F7B7 Phosphosugar-binding transcriptional regulator n=1 Tax=Lactobacillus paracasei subsp. paracasei 8700:2 RepID=C5F7B7_LACPA Length = 252 Score = 150 bits (379), Expect = 6e-35, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 102/261 (39%), Gaps = 16/261 (6%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + ++ + L+ S+ K+ D++ D + +S +A + S ++V + QK G G Sbjct: 2 IIQLNQEIFNSLSASEHKVIDFINNNADAVQTMSITNIARKTFTSVATVSRAIQKAGLNG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 L+ +S + ES S ++ ++ T++ S + Sbjct: 62 IAELRYQISHQIKHANESESPYK-------------VNTILLKSFREAKKTIDSISISGI 108 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V + A RI++ G + L+A+ F L +G+NA ++D+ + T + S D+ Sbjct: 109 LQTVDYINKADRILIYARGFTALIAEEFQQDLQLLGYNAIIMKDVMWIKQTRRFISKRDV 168 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN--SA 240 + + E+ +A+ + +G K++ P L + L + E Sbjct: 169 AVIFTVRNSTPEILESAETIHAIGAKLVTCCCIAPTKLADYSD-VLISGHSELIMRTHGL 227 Query: 241 SISACHAQGMLTDLLFIALIQ 261 + + ++ L + Sbjct: 228 EVYSKVPLFIIARTLIEYIAN 248 >UniRef50_C6ATF5 Transcriptional regulator, RpiR family n=17 Tax=Rhizobiales RepID=C6ATF5_RHILS Length = 291 Score = 150 bits (379), Expect = 6e-35, Method: Composition-based stats. Identities = 54/267 (20%), Positives = 102/267 (38%), Gaps = 7/267 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + I +R + + ++A + L PD ++ +A + V S++V+ A LGY Sbjct: 17 SLRSTIIERKASMPKRLAQVAAFALGNPDEIAFGTTASIAAASDVQPSTLVRLAHHLGYG 76 Query: 62 GFPALKLALSEALASQPESPSVPIH--NQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 GF L+ E L + S + Q GDD + I ++ Sbjct: 77 GFSDLQSIFRERLRDRTLSYEERLVTLEQSSGDDEDANLLSGFIAAANQSVNRLAATVQS 136 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL-ATVQASS 178 + + V +L +A I L S + + + K+ V + + VQ ++ Sbjct: 137 DTFTKAVNILANAETIYLIAKRRSYPLTAHMTYAFSKLNIRHQIVASPNGVDPEMVQFAT 196 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P D +A S++ + + E+ G V+AIT + L A+H + Sbjct: 197 PKDAAIAASFSPYAADSLSQSQELADRGVPVIAITDSAFSPLAACATHWFEVA----EAD 252 Query: 239 SASISACHAQGMLTDLLFIALIQQDLE 265 A + A LT L +A+ ++ + Sbjct: 253 FAGFRSLSASMALTMALPVAIAERRRK 279 >UniRef50_Q1ZB96 Transcriptional regulator n=1 Tax=Photobacterium profundum 3TCK RepID=Q1ZB96_PHOPR Length = 280 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 42/273 (15%), Positives = 95/273 (34%), Gaps = 10/273 (3%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 L +++++ Y + +L + GV ++++ +F Q LG+ GF K + Sbjct: 13 LGALTVAEERITQYFMKHYTMLPFAKIDELCKQIGVGKATLGRFLQHLGFSGFLEFKKHV 72 Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 ++ LA +P ++ + K E M T S++ + ++ Sbjct: 73 ADELAQTLTTPVERY--EVTQHTDNESILTKHYDEVMFNMTKTFASISDDDFERAIRYMQ 130 Query: 131 SAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASSPDDLLLAISY 188 + + ++ + G +S +A F + + + D+ L + + DD L AISY Sbjct: 131 NPKGKLYVMGSASSEALANYFFLLARYLRKDVVWLKADISTLPHQLADVTEDDTLFAISY 190 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 + GG+++ +T N + + + + Sbjct: 191 HRFSTITIRLVKWFHQFGGRIIFVTDQPVNPFVAYCDIQFAVESGSEGF----FNNRSSG 246 Query: 249 GMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 L + L + E R E++ + Sbjct: 247 FALIEAFIKGL-SRQKEKN-NRFNRIESVFDEF 277 >UniRef50_Q2KXW9 Putative transcriptional regulator n=1 Tax=Bordetella avium 197N RepID=Q2KXW9_BORA1 Length = 289 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 109/277 (39%), Gaps = 5/277 (1%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 RI +Y L + ++ A Y + P + S + A +AGV S++ + A++LG++G+ A Sbjct: 9 RIEAQYGELPPALQRAARYAIDNPKSIALQSMRATAAKAGVQASAMHRLARQLGFEGYEA 68 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 L+ E LA S + D + +L+ ++ + A L + E + Sbjct: 69 LRTVYREWLARSAGSFAERATALQSRSDKAGSLARELVLADSGNLAALLEPAALEAISAA 128 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASSPDDLLL 184 +L ARRI + G+ + A F + + + ++ + PDD LL Sbjct: 129 SEILAQARRIYVGGLRSLFPAAFYFNYACGMFRQDTVLLSGIAGTFADDLRHAGPDDALL 188 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 SY R+ A G +++++T + + AS + + + Sbjct: 189 MFSYDPYARDAVSAVRFAHARGLRIVSVTDSVVSPIAAPASAVILVANATPSL----FPS 244 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + L L+ + + + SEA +++ Sbjct: 245 VVPALAVAQALVGLLVARGGQANLSEVEKSEAQLREF 281 >UniRef50_A5EGL2 Transcriptional regulator, RpiR family n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EGL2_BRASB Length = 303 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 48/269 (17%), Positives = 101/269 (37%), Gaps = 7/269 (2%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 RIR LA ++ +A +L T + QLA A VS +V++ KLG+ G+ Sbjct: 13 ERIRVVRNHLAPAELAVAKVILENYPTGGLVPIVQLATAAEVSAPTVLRLVSKLGFDGYG 72 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 A L + + SP V + + + + +T + ++L Sbjct: 73 AFHETLRAEIHQRIFSP-VDAYPDSKRQPAAETPAARAQAAYVDCIRSTFSHLDVKELKA 131 Query: 125 CVTMLRS-ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASSPDDL 182 V+ L AR +++ G S ++A A L + + + D ++ + P + Sbjct: 132 AVSALADVARPVVVMGGRISAILATQLATYLSMLRKDVTHIASDGTERISALVDLKPRTV 191 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ + ++ E + ++ +T + L A+ L + + Sbjct: 192 VVLFDFRHYQQSTLDWGLEAAKRRAHLILVTDQFLSPLASHATTLLTSSTK----GLEPF 247 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERI 271 + +LT+LL + + A +R+ Sbjct: 248 DSMAGGFVLTELLISEVARALGSPARKRL 276 >UniRef50_C1YQ52 Transcriptional regulator n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YQ52_NOCDA Length = 280 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 112/279 (40%), Gaps = 7/279 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N R+ + L +SD+ L D LL P A ++A AGV ++ + AQ+LGY+ Sbjct: 5 NLQERMSEYRDRLTKSDRVLLDELLSNPAEAPLWRGGEVAQRAGVHPAAATRLAQRLGYQ 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ L+ L EA ++ ++RG V + L+ ++ A S+ + Sbjct: 65 GYLELREDLREAHEARLNGAGDRFRAELRGQ-GQASVLDTLLTTELDSLAAVGKHVSQAQ 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG-FNAAAVRDMHALLATVQASSPD 180 + E +L AR + L G SG++A+ +L + G V + V A S Sbjct: 124 IDEVADLLVGARVVYLFARGNSGVLAELLDSRLRRFGMRPVNLVGPGREVAERVLAMSDS 183 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D++++ ++ R L VG + + +T L + L Q Sbjct: 184 DVVVSFAFRRAPRGLTQLYAHACEVGARSVLVTDTLH-TLDPAPTTVLSAPRGHQ----E 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S+ M+ + + + + Q+ E + + L+ Sbjct: 239 GFSSLSVPMMIANAIVLTVAQRHPETILPALDRLDDLLN 277 >UniRef50_Q03C42 Transcriptional regulator n=1 Tax=Lactobacillus casei ATCC 334 RepID=Q03C42_LACC3 Length = 270 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 104/277 (37%), Gaps = 23/277 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I Q+Y L Q++K++ +++ D R S ++A ++ S+S++ + +K+G Sbjct: 1 MKLESLINQKYSNLNQTEKEILAFIIENRDFVRKASLSEVAEKSLFSKSAIFRCCKKIGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF L+ L++ S+ +S + + + +M T+N Sbjct: 61 TGFSQLRYVLTDEKDSEQDSL----------------ISVDYLAQTVKSMLWTVNQFKST 104 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWK-LMKIGFNAAAVRDMH-ALLATVQASS 178 + L +A I + G + + L IG A H + + Sbjct: 105 NADDIYATLAAAGTIYIYSTGWQQQIMAQQLQRDLYLIGKFAFVFPTGHDEMQLSSTKIK 164 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P D ++ ISY G+ + + + G ++++ T F N L Q A+ LY + Sbjct: 165 PGDAVIVISYKGMNATIVQLVNNLKLNGVRIVSFTSFRQNRLAQAANFNLYYDIINKTVG 224 Query: 239 SASISACH--AQGMLTDLL---FIALIQQDLELAPER 270 + +L D+ F + E E Sbjct: 225 IERKTERFFANLTLLIDIFSMGFANYLVAKEERDHEH 261 >UniRef50_UPI00016A9B9D transcriptional regulator, RpiR family protein n=2 Tax=Burkholderia oklahomensis RepID=UPI00016A9B9D Length = 291 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 49/281 (17%), Positives = 100/281 (35%), Gaps = 7/281 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L R+R Q + ++K++A L+ + ++AN AGVS ++V +FA+ LG+ G Sbjct: 8 LLYRLRAALQTFSPAEKRVAMTLIADYPITGLKTLVEIANAAGVSPATVSRFAETLGFTG 67 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 FP + AL E +A++ SP + K + T+ ++ Sbjct: 68 FPDFQRALHEDVAARFSSPGLQFDKTPERGADSGR-PHASAKALGKLVTETVASVERREV 126 Query: 123 HECVT-MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQASSPD 180 + ++ R + G SG +A+ F +L + ++ + + Sbjct: 127 ELLIEKLIDPKRTVYFLGGRHSGSLARYFQQQLHHLRSRTVLFDGVNADAIDALIEFDAR 186 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +L+A + + + V T + + AS + Sbjct: 187 SVLIAFDFRRYQHDTTRFVAAASARRAHVAVFTDPYMSPAVKHASQVFLCRTATT----S 242 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + L D L L ER+ E++ ++ Sbjct: 243 PFDSYASGLALIDFLTQELATAFGAAGHERVSKLESVREEF 283 >UniRef50_Q1LZ65 RpiR-like protein n=27 Tax=Lactobacillales RepID=Q1LZ65_STRMU Length = 274 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 96/253 (37%), Gaps = 10/253 (3%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 + + L ++++ Y+ + L+ +L+ VS +++++ +K GY GF K Sbjct: 27 KNNKKLTETEEYTWQYITRDFNEIGKLNISELSQAINVSNATIIRTLKKKGYGGFSEFK- 85 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 + + + + N+ D R + + N + TLN + E + M Sbjct: 86 ---HEIEQKKNNSLHVLTNKSLKKDTRRSIIK-----NYQEVMRTLNTLDVTAIEESILM 137 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + A+RII+ G S L+A K + D + + + DL+L IS Sbjct: 138 IEKAQRIIIFARGFSELIASEMLVKFQLLNKYCELHTDPNIIRPVSARLTSKDLVLFISL 197 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE-QATNSASISACHA 247 G L AA ++ K + ++ ++L S L E + + Sbjct: 198 NGETVALVDAARNCIKNRVKTILLSASESSSLAHLTSLQLIGFKTELSYFPDYEVHSRLP 257 Query: 248 QGMLTDLLFIALI 260 +L+ +L A Sbjct: 258 LSILSRILLDAYA 270 >UniRef50_UPI00016C007A transcriptional regulator, RpiR family protein n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C007A Length = 255 Score = 147 bits (373), Expect = 3e-34, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 95/263 (36%), Gaps = 20/263 (7%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + Y L + + Y+ P+ + + + +A +S +S+++F +KLGY Sbjct: 4 NIINLNYDIYSKLTKLETDFLSYINQNPEFVIQNTIKDIGTDAFISPASIIRFCKKLGYS 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F + L ++P + +K+I+ LN K Sbjct: 64 SFSEFRYHLRTLFINKPNNLQN----------------KKIIEVINHQFNLYLNAIDISK 107 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + E V +L + I+L G G + A +L + + + RD Sbjct: 108 IIEIVPLLTQSN-ILLYGKGTNAYFIDYLATQLSLLNLSVLSYRDAQLAKVYASNIGQGG 166 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE---EQATN 238 + L + Y+G + A + K++ IT ++L A +CL E ++ Sbjct: 167 IALILCYSGETQVSIDLALSAKQNHYKIILITRNIQSSLASIADYCLLIPEEALNSYSSK 226 Query: 239 SASISACHAQGMLTDLLFIALIQ 261 + + L D+L +I Sbjct: 227 NIHVKTNFCLVCLMDILLQYIIS 249 >UniRef50_B6GCS3 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCS3_9ACTN Length = 256 Score = 147 bits (373), Expect = 3e-34, Method: Composition-based stats. Identities = 44/263 (16%), Positives = 92/263 (34%), Gaps = 11/263 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + +R+ L +S+ K+A +L P+ S LA G S S++++ QKLGY Sbjct: 2 MNPIDELRRALPTLTKSESKVAGQILKDPNIMLGNSITNLAKVTGASNSAIIRMCQKLGY 61 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF + + + A+ + +L++ + M S + Sbjct: 62 DGFAEFRFSFNRAMMAAESPSV----------GTPDDDSRRLLETYSRYMNMIPQRVSID 111 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + A+R+++ G + A + +L ++G D+ + Sbjct: 112 QFDRLAGAIVGAKRLVIWGCNRTFQSAMQLSHRLTRLGIFNKPTNDVIVMSDDAAILEKG 171 Query: 181 DLLLAISYTGV-RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+ + S G + D M G V +T + + A + Sbjct: 172 DVCIVFSMQGRGNARYSEDMDLMRERGVDVHLVTMDRHSCMLSHADTAYVLPWISHDDSI 231 Query: 240 ASISACHAQGMLTDLLFIALIQQ 262 M ++L + + ++ Sbjct: 232 NFFEDQIIVYMFIEMLLLNVSKR 254 >UniRef50_A9IJZ1 Putative regulator (SIS family) n=4 Tax=Bordetella RepID=A9IJZ1_BORPD Length = 324 Score = 147 bits (373), Expect = 3e-34, Method: Composition-based stats. Identities = 50/284 (17%), Positives = 101/284 (35%), Gaps = 12/284 (4%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 R++ + L ++ A ++ P S ++ A GV+ +++++ A+ GY + Sbjct: 23 QRLQSLLEQLPPELQRAAHWVADHPAEVGLWSMRRQAQALGVAPATMLRLARAAGYDSYE 82 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVG--EKLIKENTAAMYATLNVNSEEKL 122 A + +ALA + + +++ + L + A+ + ++NS Sbjct: 83 AFRAPFQQALAGERPASLRERAAELQAAHGSAGAPGHDALTELQARAIQSVCSLNSSAAF 142 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASSPDD 181 V L AR++ G ++ +A + + N+ + TV D Sbjct: 143 DASVKTLLEARQVGFLGTRSAFGIAFQMHYAYQLVRRNSVLIDGLGGLQAETVDNLRDGD 202 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT--IAEEQATN- 238 L+AIS + A + + G V+A+T T + L A H L E + Sbjct: 203 ALIAISQSPYPSASVRLARQAAQQGVAVIALTDDTLSPLAVDARHVLLFERPDREGVRHQ 262 Query: 239 ------SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + L + L L + E R+ E Sbjct: 263 PAQRGPGSFFHTTAGLLGLAEHLIARLTARGGEEVLNRLSEIED 306 >UniRef50_C9AB15 Phosphosugar isomerase transcriptional regulator n=3 Tax=Enterococcus casseliflavus RepID=C9AB15_ENTCA Length = 257 Score = 147 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 89/262 (33%), Gaps = 19/262 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I+Q L++ D+ + +Y+ DT + +L+ + VS+SS+++ +KLG+ Sbjct: 1 MKLQYLIQQHQSELSELDRGILNYIFSNGDTVLSMGIVELSEQVHVSKSSILRLTKKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ K L + + ++ ++ATLN Sbjct: 61 SGYSEFKYFLRHQQEQTTTISQQ----------------KTIFEKQQEDIFATLNYVKTV 104 Query: 121 KLHECVTMLRSARRIILTGIGASGLVA-QNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 L + ++ I G S A + F+ ++ + + + + + Sbjct: 105 DLAALNCLFDRSKTIYCYPTGFSQKKALEEFSKMMLSMEKRVIVLPNKTEFDMVMPMITA 164 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +D ++ S +G + VL ++ N + ++ L + Sbjct: 165 EDCVIIASLSGETENVKENLTTFAIRQIPVLTLSAPGDNYFARHSTFHLTYYCDFFQIGR 224 Query: 240 ASISAC--HAQGMLTDLLFIAL 259 I + L D L + Sbjct: 225 KKIPSQSLIGLSCLIDYLIRSY 246 >UniRef50_Q1IJW8 Transcriptional regulator, RpiR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJW8_ACIBL Length = 294 Score = 147 bits (371), Expect = 5e-34, Method: Composition-based stats. Identities = 52/276 (18%), Positives = 100/276 (36%), Gaps = 9/276 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ RI Q L+ +++ P LS + +A++ G +++V+ AQ LG+ Sbjct: 17 MSQAERIAQ----LSPRRREIVRPAFEDPRRFVLLSVRDMADKLGTDPATMVRIAQNLGF 72 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + + + L L+ + + D + V + + + A N E Sbjct: 73 ESYKEFQHYL-HELSVVRATSLDTLEASASTDSDVVSVMRACLDQELKNIRALYNGLDLE 131 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 KL + ARRI++ G A+ + + IG A A + V++ Sbjct: 132 KLGTAARRMWRARRILVVGGDAATSLVSYTEYHFNVIGLPAYAATSPGVAVHAVRSLGKS 191 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+LLAIS+ R A + G + IT + + + A + + Sbjct: 192 DVLLAISFRRGLRMTIEAIQQARNAGAYCIGITDTYISPVARFADEFFLAGIDSNSFG-- 249 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + A L ++ +A+ Q E + Sbjct: 250 --VSYSAPMCLLNVFLVAIAQAQRAKTLEVMTKVAE 283 >UniRef50_A6DXB0 SIS domain protein n=1 Tax=Roseovarius sp. TM1035 RepID=A6DXB0_9RHOB Length = 284 Score = 147 bits (371), Expect = 5e-34, Method: Composition-based stats. Identities = 45/279 (16%), Positives = 91/279 (32%), Gaps = 7/279 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M ++ Q L + A Y+L P+ S + +A GV+ ++ + AQ +GY Sbjct: 1 MKIDEKLTQALPNLPRKLAVAARYVLDNPERIAVDSMRSVAQACGVAAPTMQRLAQHMGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +G+ + + L + V D L + + + + + Sbjct: 61 EGYDGFRQDFQKLLMGRGFGARVDALRSTFQSDSLAKLVSHMTEAAQNNIAEVAAHLEPK 120 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQ--NFAWKLMKIGFNAAAVRDMHALLATVQASS 178 ++ V +R + R + G G+ A +L + + A + S Sbjct: 121 EVGAFVAAVRRSGRTYVIGAGSMYWAAGMIEATGRLA-VPDLVSLPAGTVAASERISTIS 179 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D +LA+ + A R V AIT + L A Sbjct: 180 SSDTVLALGIAPYCAQTIDAMQYARRASASVYAITDRPSSPLAPYADGLFLAPTASPHY- 238 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + A ++ ++L A + + R+R + + Sbjct: 239 ---FPSAIAVQLVAEILLAACAAASGDASRHRLRQLDEI 274 >UniRef50_A7FLM3 Transcriptional regulator, RpiR family n=47 Tax=Enterobacteriaceae RepID=A7FLM3_YERP3 Length = 314 Score = 147 bits (371), Expect = 5e-34, Method: Composition-based stats. Identities = 56/280 (20%), Positives = 116/280 (41%), Gaps = 11/280 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R+R Y L ++++AD++ D +S +LA +GVS+++V + ++LGY Sbjct: 41 IDERLRGHYTQLTPQEQRVADFIFAHFDDLISYNSAELARLSGVSKATVSRLFKRLGYGS 100 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + ++ + Q P + ++G+ + + K+ A + +N ++L Sbjct: 101 YREMREEVRA--LRQSGMPLTDNRDAVQGN----TLLARHYKQEMANLAHWVNQLDSQQL 154 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSPDD 181 + + + A RI+L G+ S VA + +L+++ + L + +P D Sbjct: 155 TDVIDAMAQAPRILLLGLRNSYPVALHLRQQLLQVRQQVHVIPQAGQTLAEELVDITPHD 214 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++ +++ + + M G L I +L A L T + ++ Sbjct: 215 LVIVVAFRRRPKAIREILLHMQGQGVPTLLICEPQAQSLLSLARWRLTTP----LDSVSA 270 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + A L +LL AL+ + L +RI L L Sbjct: 271 FDSYSAAMSLVNLLSNALLHKILAEGRQRIHQIANLYDSL 310 >UniRef50_Q13FP6 Transcriptional regulator, RpiR family n=3 Tax=Proteobacteria RepID=Q13FP6_BURXL Length = 280 Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats. Identities = 43/277 (15%), Positives = 107/277 (38%), Gaps = 11/277 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + R+R L+ ++++LA+++L P ++ +L A VS ++V +F + LGY Sbjct: 7 SFVGRVRATMDALSATERRLAEFVLEFPGDLASYTAAELGKLANVSNATVSRFFRHLGYS 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + + + + + + ++ + G D + + A + T S+ Sbjct: 67 SYEEARRHVRDD---KKDGAALLLTGADAGQDEQGVAAH--AQLGIANLTRTFAELSDAM 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL-ATVQASSPD 180 L E + A+++++ G +S A F W+++++ A+ L + Sbjct: 122 LDEIAGAVVGAQQVLVFGFRSSQAFASYFRWQILQVVERVIALPGPGETLGEHLVGLDRK 181 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +++ + + + R G +VL +T + + + A+ + Sbjct: 182 SVVIVFGLRRRVPQTDAVIEYAARAGARVLYVTDRS-SPARAGATWTIICETSAP----G 236 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + A + L + QQ +R+ E+ Sbjct: 237 PLDNHVAVLGVCGALATKVFQQASSQGRKRLSGIESA 273 >UniRef50_A2RL75 Putative HTH-type transcriptional regulator n=1 Tax=Lactococcus lactis subsp. cremoris MG1363 RepID=A2RL75_LACLM Length = 241 Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats. Identities = 49/263 (18%), Positives = 100/263 (38%), Gaps = 26/263 (9%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L ++ ++ L +++K + +YL + + + +A EA SSV++ KLGY Sbjct: 1 MAFLGKVD--FKNLTETEKVIYNYLRNNFEKIPRMHVRDIALEAHAGASSVMRLIHKLGY 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + + + S I + + EK + + Sbjct: 59 HSYYQFQEFV--EKQQLKASTDSDIFQLLSASHYPSELIEKCRQLTEQVL---------- 106 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 A II G+G SG + + + +G NA ++ DM L + S D Sbjct: 107 ----------KADSIIFFGLGTSGNICEYAMRRFATLGLNALSLTDMTYPLESHLLESQD 156 Query: 181 DLLLAISYTGVRRELNLAADEMLRV-GGKVLAITGFTPNALQQRASHCLYTIAEEQATN- 238 L++ S +G EL + +++IT ++L Q ++ + EE+ N Sbjct: 157 SLIVVFSISGETGELIEILQHIRNREKVMIISITPKKESSLAQLSNLSINYKVEERRVNL 216 Query: 239 SASISACHAQGMLTDLLFIALIQ 261 +++ +T++L + + Sbjct: 217 YGDLTSQIPAIFITEVLSEMIFK 239 >UniRef50_A8AMT2 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=A8AMT2_CITK8 Length = 319 Score = 146 bits (369), Expect = 9e-34, Method: Composition-based stats. Identities = 49/272 (18%), Positives = 106/272 (38%), Gaps = 9/272 (3%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 + Q L +S+ +L DY+ + L+ A VS++++ +F K+G+ G+ A Sbjct: 37 LTQNIGDLTESECRLNDYINKHFSELPYHGIVDLSQNAAVSKATIGRFLNKVGFTGYAAF 96 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDP--LRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 + AL L+ + +++ R + + E + T+ + S + L++ Sbjct: 97 RRALDTTLSKNKIAAPFEKNSRQRPKNTTKTEQIVETFNNKVTSLFNSFKQTISIDSLNK 156 Query: 125 CVTMLRSA-RRIILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASSPDDL 182 + ++ ++ R I + G +S +A +F L N + D+ L + PDD+ Sbjct: 157 FIELVLNSQRHIYVVGPSSSHAMALHFCTLLKYFRSNITLLPTDISELPKCLINIEPDDV 216 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L+ SY R A + V+ IT N + ++ ++ Sbjct: 217 LIVFSYYRFNRVALNIAKWFRKKNATVVLITNSDANPYGKFCDLQFVLPSDVESI----F 272 Query: 243 SACHAQGMLTD-LLFIALIQQDLELAPERIRH 273 + + +L +A + D E ++ Sbjct: 273 QSRILGFFFIELILHLAYEKSDNEGNFAQLEE 304 >UniRef50_C2FAJ3 RpiR family transcriptional regulator n=1 Tax=Lactobacillus paracasei subsp. paracasei ATCC 25302 RepID=C2FAJ3_LACPA Length = 252 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 51/263 (19%), Positives = 111/263 (42%), Gaps = 17/263 (6%) Query: 1 MN-GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 MN +I + Y+ L+ +++ + D+++ L + + + VS ++V++ A+KLG Sbjct: 1 MNTFFEQIARHYETLSSNEQLVIDFVMRD-HNIDRLKIKTITDALFVSSATVMRAARKLG 59 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 Y F LK + + + + + ++ T+ TL + SE Sbjct: 60 YSNFSQLKYS---------AAMTQDEQAAPLPSEDFDTITGRI----TSEFDKTLQMLSE 106 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E + E V L ARRI G G+S V +F KL + + +++++ + Sbjct: 107 ENVAEFVEHLNHARRIFCVGSGSSVSVVGDFTRKLKLLDYWINDFNELYSIRDIAGLAEA 166 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD+++ +S G +N G K+++ITG +++ + + + E Sbjct: 167 DDVIVILSLGGGNHLVNQFLVRAKATGAKIISITGIGADSVAKFSDCNILVYQEAVPRKR 226 Query: 240 ASISACHAQGMLTDLLFIALIQQ 262 + + + D++F ++ Sbjct: 227 --MRSRLMLNVAIDIIFEYILSH 247 >UniRef50_C7LIK3 Transcriptional regulator, RpiR family n=39 Tax=Rhizobiales RepID=C7LIK3_BRUMC Length = 314 Score = 145 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 106/278 (38%), Gaps = 10/278 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + I +R + ++ A L+ + + + +AGVS ++++F +LG++ Sbjct: 44 SVAELINERIDAMPAGERSAAQMLIANYPMLGLKTVAEFSTQAGVSSPTILRFVNRLGFQ 103 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 +P + L + LA+Q +SP + D E + + T E++ Sbjct: 104 SYPDFQARLQDELAAQLQSPHHRNEQPDKRPDAADPGVEHTL----ENIRETFRHLGEKQ 159 Query: 122 LHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHAL-LATVQASSP 179 LH+ V L A+ + L G + +AQ + + + ++ + Sbjct: 160 LHQVVASLSLAKGNVYLIGGRFTDPIAQYMTAHMSIVRARVFHLGGQESMWRDRLLDMGK 219 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+L+ + L A++ G +V+ +T + + + A H L + Sbjct: 220 RDILVVFDIRRYQESLLALAEKARSRGVEVVLVTDQWLSPIARVARHVLAGRIAVPSVWD 279 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + A +L + + + + + + RI EAL Sbjct: 280 ----SSAALFVLAETIIREMTRMLEKDSAARIAELEAL 313 >UniRef50_B9J832 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9J832_AGRRK Length = 340 Score = 145 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 109/277 (39%), Gaps = 5/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N RI +GLA +++++A + + Q S+ Q+A AG S ++VV+ A+ LG++ Sbjct: 51 NFDARILAAIEGLAPAEQRMARFFIDQKQAVLLNSAAQIAELAGASDATVVRTARALGFE 110 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 AL+ AL L + D + +I + A+ + Sbjct: 111 SLSALRAALLSELTGTSTPGNRLERTLAETDGDAAGILHHVIGIHETALDVLKRPETAAS 170 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA-SSPD 180 + +L +A + + GIG SG +A + + +IG + LA Sbjct: 171 FTRAIDILAAANQRHVFGIGPSGAMADYASLQFNRIGLPTYPLSASGIALADRLLWLGRG 230 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D +L ++Y + RE+ + ++ R G V+ I+ + + + L + Sbjct: 231 DAVLMMAYAPLYREVEVVLEQASRHGVPVILISDNLGPLVADKVAEILPVP----RGKAD 286 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 ++ +L + + L + A + + H L Sbjct: 287 HLAMHAGTMVLIEATIVGLAAHRRQAAFDSLDHLSTL 323 >UniRef50_A8FAT4 Transcriptional regulator n=2 Tax=Bacillus RepID=A8FAT4_BACP2 Length = 254 Score = 145 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 101/258 (39%), Gaps = 21/258 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + + ++ L ++D + + + + + Q LA A S SS+ + A+K+G+ Sbjct: 1 MILDKLVNEYFEDLNKNDLHIIKTIHDHLEEMKTMKIQDLARYAHTSISSIHRLAKKIGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ LK + ++ + + KL+ ++ + + Sbjct: 61 DGYSDLKSYVKLNHLTEESTQDLM----------------KLLDQDISQTRKYMEQLDFH 104 Query: 121 KLHECVTMLRSARRIILTGIGASGL-VAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 +L++ ++ A I + G G + L +A + +L + + +R L + Sbjct: 105 QLNQ---LIDRAPYIYIYGTGTAQLDLANDVQRQLWSLHKKSQVLRSKRDLTDGIIEFGE 161 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE-QATN 238 DDLL IS +G + L+ + K +++T N L Q A +Y + N Sbjct: 162 DDLLFIISLSGESKNLDEIIQLVKTRHIKFISMTTLRNNLLAQNAMFNIYVSSTPFPLYN 221 Query: 239 SASISACHAQGMLTDLLF 256 S+ ++ D++ Sbjct: 222 KVDNSSFLPFYIVVDMIV 239 >UniRef50_C7RG92 Transcriptional regulator, RpiR family n=2 Tax=Anaerococcus RepID=C7RG92_ANAPD Length = 249 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 48/264 (18%), Positives = 99/264 (37%), Gaps = 21/264 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + +R+ Y L +D ++ Y++ A L+ Q+A+E G+S SS++ F +KLG Sbjct: 1 MILMNLVRENYSKLNNNDLRIYSYIIQNKSEANELNINQMADELGLSTSSIMTFTKKLGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ LK + +D + I+ + T+ + S Sbjct: 61 DGYSELKYLIK-----------------WSEEDKNSSFDDNEIEYTKNDINLTMTMMSSL 103 Query: 121 KLHECVTMLRSARRIILTGIGASGL-VAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 L + AR I + G G + L VA+ + +G + Sbjct: 104 NLDGLFRKINEARDIFVIGNGYTQLNVAEELKRNFLNVGKILDILDQDSDYERYKGLIKE 163 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+L IS++G +L + + +IT + N + + + + + E + Sbjct: 164 GDVLFVISFSGENEKLIDFIKSLKE-DVTIASITKLSNNTISYLSDYNISFVTHEVYDFN 222 Query: 240 ASIS-ACHAQGML-TDLLFIALIQ 261 ++ +Q + D + + + Sbjct: 223 QRMTITPISQYYIVIDFIILKYLS 246 >UniRef50_C2HLE6 Transcriptional regulator n=8 Tax=Lactobacillus RepID=C2HLE6_LACAC Length = 260 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 103/266 (38%), Gaps = 17/266 (6%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + ++ + L ++DK + YLL P+ A LS +LA + VS+S++ + ++KLG Sbjct: 3 MDLETAVMKKKESLNETDKAIVSYLLKYPEDASKLSLMELAQKLYVSKSAIFRLSKKLGL 62 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK L+E + ++ + T + Sbjct: 63 SGFSELKFELTELTNKKVQNKKYVQELDFN-------------NNLHQIIDETFKYFKDA 109 Query: 121 KLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASS 178 H+ L +A I + G ++A+ A IG A + + ++ Sbjct: 110 NFHDLFIDLDNAETIYIYSTGWQQQIIAEYLAHSFFLIGKKAIILPSAKDEVAMLGRSIE 169 Query: 179 PDDLLLAISYTGVRRELNLAADEM--LRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 +D+L IS+ G + + ++ + K +++T + P + + + + Sbjct: 170 ENDMLFVISFGGFNKTIIEELKKIDTVTDKLKFVSLTSWQPGKIASLSDYSFFFKTTPFQ 229 Query: 237 TNSASISACHAQGMLTDLLFIALIQQ 262 ++ + + +L DL+ + Sbjct: 230 ISNQNAVTFSSAYVLIDLIINEYGKH 255 >UniRef50_B5I710 Transcriptional regulator n=6 Tax=Streptomyces RepID=B5I710_9ACTO Length = 307 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 97/274 (35%), Gaps = 14/274 (5%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 L+ +++A YL+ A LS LA+ GVSQ SV +FA +G+ G+PAL+ L Sbjct: 37 RPRLSPGQRRIAQYLIEHITEAAFLSITDLADRVGVSQPSVTRFAAAVGFSGYPALREKL 96 Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN-SEEKLHECVTML 129 Q + + D+ + + + +++ E L Sbjct: 97 ------QAIALGTLAGGPVADDESRGNELQAAVDAEIENLENLRRDFADPDRVIELGRKL 150 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP---DDLLLAI 186 + + + G+ S +A+ FA+ +I + V ++ S +LA Sbjct: 151 SESTPLTILGLRISASLAEYFAYAARRIHPDVRLVTRGGSVAYDALLQSREAGGTWVLAF 210 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S +E A G K+ +T + A T + + Sbjct: 211 SMPRHAQETLTALRVARSAGLKIALVTDLALGHVADEADVLFSTGTGSRLV----FDSYA 266 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A G++ L A+ D E R+ E + + Sbjct: 267 APGVIAAALLQAMTDADPERTQARLEEYEQISDQ 300 >UniRef50_A9BSK7 Transcriptional regulator, RpiR family n=4 Tax=Burkholderiales RepID=A9BSK7_DELAS Length = 314 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 58/280 (20%), Positives = 94/280 (33%), Gaps = 8/280 (2%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 R+ Q+ L S+ +A L A S+ LA G S S+VV+ KLGY + Sbjct: 14 QRLAQQGADLTASELTVAQTLGSNYPHALLESATALAAHTGTSASTVVRLFAKLGYASYA 73 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 + + + ++ + + L + + + + AT Sbjct: 74 EAQREARGEVTALLQTAAQRAPVLLGAQRSLSECVDDALLHDQHNIQATREGLDMAAFEA 133 Query: 125 CVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS--SPDD 181 L R+ + S V+ A L + D A+ Q P D Sbjct: 134 MARKLAQGEGRVFVLAQLNSSPVSAWLALHLN-MCRPGVQELDAGAIAPADQLLWIGPSD 192 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 LLA S + R A G +VLA+T L A H L N++ Sbjct: 193 TLLAFSVSQYSRGTFEIAQRFADAGAQVLALTDSPAAPLATVAHHWLQVRTA----NASP 248 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + A L + L A+ Q + E + +AL K+ Sbjct: 249 FHSYTAAFYLCNALVSAVAQLRHKDVSEALARRDALWKEF 288 >UniRef50_C9A749 Putative uncharacterized protein n=1 Tax=Enterococcus casseliflavus EC20 RepID=C9A749_ENTCA Length = 256 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 34/260 (13%), Positives = 86/260 (33%), Gaps = 30/260 (11%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 L + ++ ++ + + ++LA E S +S+ +F +K F K+ L Sbjct: 8 PELTALEYEVYRFVSKNLASVSKMKMKELAKETHTSTASISRFCKKFECDTFTEFKINLR 67 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 L S +S + + E++ +L++ Sbjct: 68 FYLDSLVKSKISDSDE----------------SQTIDFLKRVNQPFLSERIDRATEILKN 111 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH----ALLATVQASSPDDLLLAIS 187 ++ G G S +A+ A +G A V D ++ +S Sbjct: 112 KSFVLFIGSGLSETIAEYGALYFTDLGKTALKVDDPSNYPIDWFPEDILCKTG--IIVLS 169 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI--------AEEQATNS 239 +G +E+ ++ + +++AIT + + Q + + A ++ + Sbjct: 170 ISGETQEMIRYLQKLNQKDCQIIAITNTEDSTISQLSDLTVPYYIERETIFKASQKKEKT 229 Query: 240 ASISACHAQGMLTDLLFIAL 259 +++ L + + + Sbjct: 230 IELTSQLPAIYLIEKIAKRI 249 >UniRef50_C3RP07 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RP07_9MOLU Length = 250 Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 91/250 (36%), Gaps = 19/250 (7%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L++++K+L YL ++ QLA +S +S+++F KLG GF LK L + Sbjct: 12 DLSENEKELLYYLENSCKEVVSMTLSQLAKATYMSNASIMRFCNKLGLSGFNELKYELKQ 71 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 ++ + +++ EK + + + E + E V +L S Sbjct: 72 SMHQEI---------------DYQMIIEKPLSRFLDNL----KNLNYEIIEEVVDLLCSP 112 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVR 192 + I + G S + A F L I N + D+H + + +S Sbjct: 113 QPIYVVGRSLSLVAADYFQTILSSIDINCILINDLHLSKSVFNNLKAPATIFIVSANNAG 172 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLT 252 + + K++ +T +L + L + E + I++ + Sbjct: 173 KIYDEVVTIAKTHDCKIILLTSNAKGSLVDSCDYVLSSNDENLTYHGVDINSRLGIFTIM 232 Query: 253 DLLFIALIQQ 262 ++ Q+ Sbjct: 233 QIIIELTAQK 242 >UniRef50_UPI000196AB3E hypothetical protein CATMIT_01164 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196AB3E Length = 242 Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 38/254 (14%), Positives = 89/254 (35%), Gaps = 21/254 (8%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 + L+ + + +Y++ H+ L+ + VS S + + A+KLGYKGF K Sbjct: 5 DQMNQLSDLELDIYNYIISHRHEVIHMKLIDLSTDLHVSSSMITRVAKKLGYKGFLEWKA 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 + +P ++ + + + + +H+ + Sbjct: 65 EMKLDQEDKPIQNKRALNY----------ILDYFNRVDNKEFDDL--------IHQTAEI 106 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + ++ +I +GIG S +A+ A + G D + +D L + Sbjct: 107 IVNSHEVICSGIGLSDAIAKFAASLFNRKGKRTMYSGDFSSRF--RGMYDQNDCALFFTV 164 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-NSASISACHA 247 +G RE+ ++ + K++ IT + + + L + S + Sbjct: 165 SGETREIIDRIKDLKKYDIKIIVITNSASSTAAKMSDLALTYYMPSTKNSDFYSSATQVP 224 Query: 248 QGMLTDLLFIALIQ 261 + + + I+ Sbjct: 225 VLYIIESIANLFIE 238 >UniRef50_C3RH58 Predicted protein n=2 Tax=Bacteria RepID=C3RH58_9MOLU Length = 255 Score = 144 bits (364), Expect = 3e-33, Method: Composition-based stats. Identities = 42/271 (15%), Positives = 91/271 (33%), Gaps = 18/271 (6%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + ++ L + + + + LL D L+ LA VS +++ + +KL Y Sbjct: 3 MSLIKNFQKYGNNLTELEIECFNKLLTFRDLEPSLTISSLAETLNVSTTTIFRMVKKLDY 62 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 K F + L + E S E + T+ + Sbjct: 63 KTFMDFRYDLLYHRRDEYEYQSP---------------VESTCDSLEKEIKDTIEMLRNL 107 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + + + A+ +++ G + VA+ A KL G D L + D Sbjct: 108 DIDDVIKDIVKAKSVLICSSGMNKYVAKILAVKLSLYGIRTIYPDDHWFLYLEANNLTQD 167 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D ++ +S G + G K+L +T + + + +++ + Sbjct: 168 DFVIVLSRGGATEAIIDVMKNAKLSGCKILLVTETRNSPMTKLSNYVMNVSV--TKDEGY 225 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERI 271 I + + + L L+ Q + + Sbjct: 226 DIDSRLHIHLAIEYLLRELMNQ-YLYNKKYL 255 >UniRef50_B1IEE2 Transcriptional regulator, RpiR family n=11 Tax=Clostridium RepID=B1IEE2_CLOBK Length = 253 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 41/267 (15%), Positives = 98/267 (36%), Gaps = 23/267 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ I+ + GL + + ++ +Y++ + + + +A S S++++ A+KLGY Sbjct: 1 MDISKFIQNK--GLTEIEIEVLNYMIDNINDINKMGVRGVAKNNFTSTSTIMRLAKKLGY 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF ++ L ++ + + N ++ L NS E Sbjct: 59 SGFLEMQYNLLSLTKNELKDNLNDSGF--------------IESLNMDSL---LEENSTE 101 Query: 121 KLHECVTMLRSARR--IILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 ++ + +L + I + G SG+VA+ KL+ +G ++ Sbjct: 102 AINNFIDILFNDDHKFIFIYANGFSGIVAEYINKKLLVMGKRCILSNGTDSIGVFENNLD 161 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 ++ IS +G + KV++ T N++ + + + + Sbjct: 162 FISAIIVISKSGETPMVLNKVKTAKEHNIKVISFTNERENSISKLSDIRFKIKDTNKLDD 221 Query: 239 SASI-SACHA-QGMLTDLLFIALIQQD 263 + + +L +LL ++ Sbjct: 222 RNLMPNTFFPKVLVLIELLVYEYYKKK 248 >UniRef50_A3PT11 Transcriptional regulator, RpiR family n=4 Tax=Mycobacterium RepID=A3PT11_MYCSJ Length = 287 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 48/221 (21%), Positives = 89/221 (40%), Gaps = 3/221 (1%) Query: 15 AQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEAL 74 +++++++ LL +A S+ +LA A VS +V++FA LG++GF L+++L + Sbjct: 21 SRAERRVGRALLADYPSAGLASAARLAERADVSPPTVLRFAHSLGFEGFADLQVSLRAEI 80 Query: 75 ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR-SAR 133 ++ P + + PL + + +N A+ TL L V +L R Sbjct: 81 SAMSSGPITRLPDAPAAGSPLDRLLNQARAQNDRALE-TLAHLPGSSLEAAVALLADQTR 139 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA-SSPDDLLLAISYTGVR 192 + L G S L+AQ+ L ++ + D + D+L+ Y + Sbjct: 140 PLFLHGGRFSVLLAQHLGAHLEQLRPGVRLLADPSGRDLGAMMELTRRDVLVLFDYHRYQ 199 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE 233 A R G V+ IT + A L + Sbjct: 200 ASAVDVAARFHRAGAAVVLITDDLACPVAPDAEVVLAASST 240 >UniRef50_D2BNU6 Transcriptional regulator, RpiR family n=4 Tax=Lactococcus lactis RepID=D2BNU6_LACLK Length = 243 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 102/255 (40%), Gaps = 28/255 (10%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 +Q L +++ YL D ++ + +A EA V SSV++ K+GY + K + Sbjct: 10 FQKLTYTERTCYSYLRDNVDKIPYMRVRDIALEAHVGTSSVMRLIHKMGYDSYTDFKEYI 69 Query: 71 --SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 + L + ++P I +D E++L Sbjct: 70 IDKKELEKGSSNTAIPFSLDIFSNDI------------------------EQRLDNLAHR 105 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + + II TG+G+SGL+ A +L +G N + D+ +A+ ++ + L++A+S Sbjct: 106 VIESDNIIFTGVGSSGLICDYAARRLAGVGINTFSFSDVTYPIASKLQNTTNTLVIALSI 165 Query: 189 TGVRRELNLAADEMLRVG-GKVLAITGFTPNALQQRASHCLYTIAEEQATNS-ASISACH 246 +G E+ + + IT +++ + + L E N+ +++ Sbjct: 166 SGETNEIIEVLTSLRSNKDVYISCITPKLNSSIAELSDFVLTYRINEHRINTHYDLTSQL 225 Query: 247 AQGMLTDLLFIALIQ 261 LT+ L + Q Sbjct: 226 PTVYLTERLTDLVYQ 240 >UniRef50_C2HN51 Transcriptional regulator n=7 Tax=Lactobacillus RepID=C2HN51_LACAC Length = 270 Score = 143 bits (363), Expect = 4e-33, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 98/266 (36%), Gaps = 22/266 (8%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + L S+K++ ++L P LS +LA + VS+S++ + +KLG Sbjct: 3 NLRSMVYNSGNKLNDSEKQIIQFVLNNPKDCSKLSLAKLAKKLYVSESAIFRLCKKLGLS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ LK L E S+ + I+ ++ K+ L + Sbjct: 63 GYSELKFDLVELAESRKK--------PIKIENNFARELGKVNN-------DVLKYFKQRD 107 Query: 122 LHECVTMLRSARRIILTGIGASG-LVAQNFAWKLMKIGFNAAAVRDMHALLATV-QASSP 179 + + A I + G L+AQ A +L +G A + L + + Sbjct: 108 FNSLYRDIDDAGTIYIYSTGWQQELIAQYLAHELFVVGKQATVLPSALDELKVAGRYAKK 167 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKV--LAITGFTPNALQQRASHCLYTIAEEQAT 237 D+L IS+TG + +N ++ V K ++ T N L + H +Y Sbjct: 168 GDVLFIISFTGDNKTINEEITKLELVNDKFRYVSFTNMMQNKLASLSQHNIYFPTIAFTD 227 Query: 238 NSASISACHAQG---MLTDLLFIALI 260 ++ + A L LL + Sbjct: 228 DADFKTGKVAFTPAYYLIGLLISEYV 253 >UniRef50_C7QJ71 Transcriptional regulator, RpiR family n=5 Tax=Actinomycetales RepID=C7QJ71_CATAD Length = 323 Score = 143 bits (363), Expect = 4e-33, Method: Composition-based stats. Identities = 64/272 (23%), Positives = 99/272 (36%), Gaps = 17/272 (6%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L+ + +++A YLL LSS +LA GVSQ SV +FA LG+ G+P L+ AL Sbjct: 56 RLSPAQRRIAHYLLENLPEVAFLSSMELAERVGVSQPSVTRFAAALGFSGYPELRAALR- 114 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLN-VNSEEKLHECVTMLRS 131 P IH + + L E + A + A +L + L + Sbjct: 115 --PIALRVPEAGIHGERIAGNELHSALE----SDQANLEALHKYAADPARLSRLGSDLAA 168 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM----HALLATVQASSPDDLLLAIS 187 + + + G+ S VA FA+ +I + V H L A+ L++ + Sbjct: 169 SEPLSVIGLRMSAPVASYFAYGAARIHPDVRVVHTPGSLAHEALLQAVAAGGTWLVVFV- 227 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHA 247 E + +G K IT A L ++ + A Sbjct: 228 LPRYPAESVVVLRSARELGLKTAVITDVPLVPFAHLADVLLPVGVGSRSV----FDSHAA 283 Query: 248 QGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 LL AL E ER+ EAL + Sbjct: 284 PMAFAALLLQALADAAPERTQERLEAYEALAE 315 >UniRef50_Q6F0H6 Putative transcriptional regulator n=1 Tax=Mesoplasma florum RepID=Q6F0H6_MESFL Length = 271 Score = 143 bits (362), Expect = 5e-33, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 112/273 (41%), Gaps = 13/273 (4%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 + L ++ D + + + Q L+ V ++++V+ +K G+ ++++ + Sbjct: 3 KNLTFAEMSALDQINKNINFFVSNNLQNLSKNYNVGEATLVRLVKKRGFSSLKEMQISYA 62 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 + + + + ++ + + ++ T + + +++ +L + Sbjct: 63 KKIDIENLFGNSD-------NNQNTKIINDVANFEVFSIIQTSECINIKDINKTAELLIN 115 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD-LLLAISYTG 190 + + + GI S L A A L KIG N + + +H + + + +D ++L S +G Sbjct: 116 SNKRLFFGIENSQLSATFLANNLQKIGLNCSVYQSVHGAITELNFLNKEDSIILIFSSSG 175 Query: 191 VRRELNLAADEMLRVGGKVLAITG---FTPNALQQRASHCLY-TIAEEQATNSASISACH 246 +E A + + + I + Q A+ ++ + + + +IS+ Sbjct: 176 ETKECIEVAKIAHEMNLRYIWIGSEFASKKSEYLQMANIKIFHSYHKNEILRFPNISSSS 235 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 Q +++LLF +I + + + + S +VK Sbjct: 236 GQLFISNLLFNIVIN-NKDGTSDILTKSNTMVK 267 >UniRef50_C1D3U9 Putative transcriptional regulator, RpiR family n=1 Tax=Deinococcus deserti VCD115 RepID=C1D3U9_DEIDV Length = 313 Score = 143 bits (362), Expect = 7e-33, Method: Composition-based stats. Identities = 50/274 (18%), Positives = 102/274 (37%), Gaps = 8/274 (2%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 ++ + + ++LA Y+L L++ LA AG SQS+V +FA +LG+ + A Sbjct: 18 LQSELPEFSGAQRRLALYILQHAAELPMLTTTALAQAAGTSQSTVTRFASRLGFSSYAAF 77 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 AL + + + + LI + + + ++ + H V Sbjct: 78 TDALGRMVLDELHMNIPLERFRHSEGNGG---LASLINQEILHLRSLQSLVETKAFHRSV 134 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQASSPDDLLLA 185 +L +R +++ G AS +A + L ++ + + +L S D L Sbjct: 135 ELLTQSRSVLVAGCAASTSLAVHTHLYLSRLRPQVQCATEFNASLFTQAVHYSAGDCALL 194 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 S + +L + + +V+ +T + + + L T + Sbjct: 195 FSVPRMTGDLARMLGLLQQRDVQVILVTDPSGLIFTEGVTETLVVPVSNTPTTAVP---- 250 Query: 246 HAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + ML LL A + E + ++ E L K Sbjct: 251 ASMMMLASLLIDATALRLPEDSLRNLQRFEGLAK 284 >UniRef50_UPI000196AA29 hypothetical protein CATMIT_01879 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196AA29 Length = 279 Score = 143 bits (361), Expect = 8e-33, Method: Composition-based stats. Identities = 31/241 (12%), Positives = 88/241 (36%), Gaps = 5/241 (2%) Query: 21 LADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPES 80 +A +L + +S LA S +++ +F + L + F K ++ AL + Sbjct: 33 IAKTILTHLEQIPSISINDLAELCYTSPATISRFCKDLNCRNFATFKKEMAIALEIAHDE 92 Query: 81 PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGI 140 + + + + +K+ + ++ + + ++ A + + G Sbjct: 93 IHFSFDDDFKIKKNPQYLVDKVYDDTKKSLELGQQQLDINDVDKICELIHDAPHVFMIGY 152 Query: 141 GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAAD 200 S + Q+F K++K+ A + + + +DL++ ++ + ++ Sbjct: 153 QFSRIACQDFQLKMLKLEKFLYAFANRGDEVQKLDLIEENDLVIIVTVRARKELIDSLIT 212 Query: 201 EMLRVGGKVLAITGFTP--NALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIA 258 + + ++L +T N + + EE +SIS +++++ Sbjct: 213 RIKKQKARILIVTMNKDYTNP---EVDYYYHLNGEESDYTQSSISGFIDTVSFFNVVYLR 269 Query: 259 L 259 Sbjct: 270 Y 270 >UniRef50_B5H8Z9 Transcriptional regulator n=3 Tax=Streptomyces RepID=B5H8Z9_STRPR Length = 315 Score = 143 bits (361), Expect = 8e-33, Method: Composition-based stats. Identities = 60/273 (21%), Positives = 105/273 (38%), Gaps = 14/273 (5%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 L+ +++A Y++ A LS LA GVSQ SV +FA LGY G+PAL+ AL Sbjct: 46 HRLSPGQRRIAQYIIDHLTEAAFLSITDLAERVGVSQPSVTRFATSLGYSGYPALREAL- 104 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN-SEEKLHECVTMLR 130 + +A + S +IR ++ + + + V +++ L Sbjct: 105 QPIALSAVAGSPETRAEIRRNE-----LQAAVDAEIQNLENLRRVLADTDRVLGIGRELA 159 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP---DDLLLAIS 187 + + + G+ S +A+ FA+ +I + V ++ S +LA + Sbjct: 160 LSMPLTVLGLRISVSLAEYFAYAARRIHPDVRLVTRGGSVAYDALLQSREAGGTWVLAFA 219 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHA 247 E A R G +V IT T L + A L + + A Sbjct: 220 MPRHANETLAALRAARRTGLRVALITDLTLGPLVEEADVTLTAGTGSRLV----FDSYAA 275 Query: 248 QGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 G+L+ + A+ D E R+ E + + Sbjct: 276 PGVLSAAVLQAMADADPERTQVRLEGYEQVADQ 308 >UniRef50_D1PQY5 RpiR-family transcriptional regulator n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQY5_9FIRM Length = 258 Score = 143 bits (361), Expect = 8e-33, Method: Composition-based stats. Identities = 49/265 (18%), Positives = 96/265 (36%), Gaps = 27/265 (10%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ ++ + L +++++ Y+L D A + +A + S S++++ + K+GY Sbjct: 1 MDIKKMVQGK--KLTDAEQQVLIYILDHLDVALAQGVRDIARQNYTSTSTIMRLSHKMGY 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF + L E S + + + + L N+ + Sbjct: 59 AGFVDMCYKLRTLTQEHTEQVSE---------------AQNFLDGF--NLDSLLAYNAYD 101 Query: 121 KLHECVTMLR--SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 +L C + + + I + G SGLV + A KL +G ++ + Sbjct: 102 QLKACAQHIAGLNGKFIFVYATGFSGLVGEYLAKKLTNMGRLCLFAGGGDSVGMFENSLD 161 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL----YTIAEE 234 L L +S +G + G +AITG PN++ Q A Y ++ Sbjct: 162 SMGLFLCVSKSGETALVRDKIKTARENGVPTVAITGERPNSVSQYADLWFRVEDYCKLDD 221 Query: 235 QATNSASISACHAQGMLTDLLFIAL 259 Q + ML +L+ Sbjct: 222 QNVRPNTFFPQ--ALMLAELIAYEY 244 >UniRef50_C9A1P4 Transcriptional regulator n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A1P4_ENTGA Length = 254 Score = 143 bits (361), Expect = 9e-33, Method: Composition-based stats. Identities = 48/270 (17%), Positives = 103/270 (38%), Gaps = 23/270 (8%) Query: 1 MNG--LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 M+ + + + L ++D + Y+ A + LA + S+SS+ +FAQK+ Sbjct: 1 MSIKTEELVSKYFFDLNENDLAIWKYISNNKKEASESTLVNLAKKCNYSKSSIHRFAQKI 60 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 YKGF LK AL L + LI + + + ++N Sbjct: 61 SYKGFSELKYALKAELE-------------------AEDLEGNLIDQYVSIIANSMNEMK 101 Query: 119 EEKLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 +++S++++ + G G VAQ + + V + + + Sbjct: 102 YRDFSTIFQLIQSSKKVFIYGTGTLQRAVAQEMRRVFLAGDEHFYVVEGVDEIGSLTDTL 161 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 + +DL+ IS G + A ++ G + IT F+ N + ++ ++ E+ Sbjct: 162 TTEDLVFIISLRGRSDNAHSFAKDLKVKGVPFVVITSFSENQIAHFSNENIFVNLEQVPI 221 Query: 238 NSASISACH-AQGMLTDLLFIALIQQDLEL 266 + + +L +LF+ ++ + Sbjct: 222 GNWKKYSVLDPYFILVSILFLRYMEYKQKK 251 >UniRef50_A3VFQ4 Putative transcriptional regulator protein n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VFQ4_9RHOB Length = 279 Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 91/272 (33%), Gaps = 8/272 (2%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 Y L+ ++ DY+ P S + +A+ +G++ ++ + ++ LGY+ F L+ Sbjct: 3 SNYDALSARLREAGDYIAANPLDTATRSLRAVADHSGLAPATFTRLSKALGYENFEELRE 62 Query: 69 ALSEALASQPESPSVPIHNQIRGDD-PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 + L + S + D + + + + + + K Sbjct: 63 GMRRRLERRQASFAARADALQGASDGGSADLIRRTREASLTNIDRLTDEIDTAKFDTIAD 122 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA--SSPDDLLLA 185 L +ARR++L G S +A+ A+ +G N D L+ Sbjct: 123 HLHAARRVVLLGGLGSTAIAEYAAYMGNFLGDN-WMPAGRMGASVGAALSDLDRRDALIV 181 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 + AA+ G VL +T + AS + E S+ Sbjct: 182 FTKPPFANTSIRAAEFARARGVYVLVVTDTHTCPALRHASARVVVPTESPNF----FSSY 237 Query: 246 HAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 A + L + Q+ A ERI E Sbjct: 238 VATMFFVETLMAMIAQRAGPTATERIADVETA 269 >UniRef50_C1IAG1 Predicted protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IAG1_9CLOT Length = 267 Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats. Identities = 39/240 (16%), Positives = 84/240 (35%), Gaps = 4/240 (1%) Query: 21 LADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPES 80 +A +L + ++S +LA+ S +++ +F KLGY F K + + + Sbjct: 24 IAITMLRNIRSIPNMSISKLADLCFTSPAAITRFCHKLGYSNFIEFKENIKINIGHYTKG 83 Query: 81 PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGI 140 P + D P + + E + + + + V ++ ++ + + G Sbjct: 84 LMKP--KAMHYDLPREDILNNMSLEIINEIETFKSFIDLKVIDRVVELIFNSNNVCIFGT 141 Query: 141 GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGV-RRELNLAA 199 S L+AQ KL+ I D+ + L + IS TG Sbjct: 142 QFSQLMAQELQRKLVNISKLIYHANDVQEQERLADELDENSLAILISPTGRFTLYHERLW 201 Query: 200 DEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIAL 259 ++ + V+ IT +R+ + +Y + + L + ++I Sbjct: 202 RKIEKSSATVVVITEQHKPEYMKRSDYIIYLPPRNDSNEYVQNH-RYDLSYLLEYIYIRY 260 >UniRef50_C9XKC3 RpiR-family transcriptional regulator n=4 Tax=Clostridium difficile RepID=C9XKC3_CLODC Length = 249 Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats. Identities = 49/269 (18%), Positives = 97/269 (36%), Gaps = 24/269 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + Q Y L ++DK + +L+ R+ S +++ANE VS++++++ +K+G Sbjct: 1 MRLESLVNQSYNSLNENDKIIIKQILICQREYRNFSCEKIANECNVSRATLLRLCRKIGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F LK L + D+ V E + + Sbjct: 61 DSFSDLKYLLKNNQLEF-----------VNNDNNFHDVCEN-YRLLMNELQKI------- 101 Query: 121 KLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + ++ A I + G G +AQ + +G + D+ + ++ Sbjct: 102 SFQDICKIIYDAETIYIYGTGNEQKSLAQEIKRIFLSVGKCVIDLFDIGEIEFMRESFQK 161 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DL + IS +G + A + +++T N + + LY + + Sbjct: 162 SDLFIIISLSGETKSGIEIAKFI-NNHIHTISLTRLDNNTIATLCEYNLYVETQ-KLDTL 219 Query: 240 ASISACH--AQGMLTDLLFIALIQQDLEL 266 +IS A L DLL + I+ Sbjct: 220 QAISYEVVGAFYALLDLLHMNYIEYRRRK 248 >UniRef50_D0CS12 Transcriptional regulator, RpiR family n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CS12_9RHOB Length = 329 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 46/278 (16%), Positives = 103/278 (37%), Gaps = 8/278 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + R+R++ + + + + Y++ P S + A++ GVS +++++ A ++G+ Sbjct: 38 LIDRLRRQIDHMPEQLQAVTKYIIDHPADFGLDSIRATADKIGVSTNAIIRLAHRMGFSR 97 Query: 63 FPALKLALSEALASQPESPS-VPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F + + L + E ++ P + + +L + K Sbjct: 98 FEDFRAPFRQDLTTDREDRLGQDWLTRMADTGPFGAAQADFARNELNVVSRSLRLLDPAK 157 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA--LLATVQASSP 179 + +T++ SA+R +T AS +A F + N + H + + ++ Sbjct: 158 VETAITLMTSAQRCFVTATRASHALAYYFHYAGRMAHPNLHLIP-RHMGSAIDDLLDANQ 216 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D LLAI+ + A + G +++ + A A L + Sbjct: 217 TDCLLAITIHPYSSDTIQAMRFARKQGLRLILLADSDVIAPGIDADVTLKISTRSKHL-- 274 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 S+ ++L L Q + A ER+R + Sbjct: 275 --FSSFSGAMAAIEVLLGHLFAQSGDAAAERVRRYQQA 310 >UniRef50_C8P353 Putative uncharacterized protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P353_ERYRH Length = 256 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 52/277 (18%), Positives = 99/277 (35%), Gaps = 24/277 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARH--LSSQQLANEAGVSQSSVVKFAQKL 58 M+ +I L +K+L LL ++ + + + +A+ VS++SV +F +KL Sbjct: 1 MSLQKQISIHIHSLTFMEKELLRNLLDNFESFEYRYFTIENIADRFNVSKTSVHRFTKKL 60 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 GY F K + I + T + + Sbjct: 61 GYDSFTYFKDDFFGRVVQDEVFAYTRIP-------------------YVDMLTHTYELAT 101 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS- 177 + + V + +++RI + G+G S + + F KL G A D + + +A Sbjct: 102 KTITDDIVKKMINSKRITIYGMGMSNFLGKMFQIKLQLYGKTAEQYDDSRFMRLSARALV 161 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 +D+L +S +G E+ A E ++ IT + + A+H + T + Sbjct: 162 PKEDVLFVLSRSGRPPEIVEAVVEANLRKIDIILITEVPDSPIGMMATHIIQTSQSKDLD 221 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 N I + DLL I+ + Sbjct: 222 N--DIDTRLNAHIAMDLLMARFIEFREKEEVSNEEKY 256 >UniRef50_A4NYS2 N-acetylneuraminate lyase n=2 Tax=Haemophilus influenzae RepID=A4NYS2_HAEIN Length = 148 Score = 141 bits (357), Expect = 2e-32, Method: Composition-based stats. Identities = 44/135 (32%), Positives = 71/135 (52%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L +I YQ L +S+KK+AD +L PD S ++A V ++++V+F + +G+K Sbjct: 6 NVLNKIGSLYQSLTKSEKKIADTILRSPDLVSQCSLSEIAKHLQVGEATLVRFCRTIGFK 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF KL LS LA++ + +I D + +KL M T+N+ ++ Sbjct: 66 GFSEFKLELSIELATKDNQDESILETEIMPSDDSLTIAQKLQTAVANVMEETINLLDLKQ 125 Query: 122 LHECVTMLRSARRII 136 L E V +L+ ARRI Sbjct: 126 LEEVVKVLKKARRIF 140 >UniRef50_C8SNA8 Transcriptional regulator, RpiR family n=2 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SNA8_9RHIZ Length = 311 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 53/266 (19%), Positives = 102/266 (38%), Gaps = 7/266 (2%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 L S++K+ LL T+ ++ LA AGVS +VV+ KLGY GFP + L Sbjct: 14 LTPSEEKIVRLLLTDYPTSGLGTASSLARRAGVSDPTVVRLVVKLGYDGFPDFQAKLLAE 73 Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR 133 + ++ SP + + + + V + T A+ + +L A+ Sbjct: 74 VEARLHSPLLMMEAKRQSGSSDSAVLA-YLDSVTTALQKATAATPVQTYERAARLLMEAK 132 Query: 134 -RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHAL-LATVQASSPDDLLLAISYTGV 191 I+L G S +A A L++ + + T+ D+L+ Y Sbjct: 133 GEIVLLGGRFSRHIAGMLAGYLVQFRSGVRDLGVLSPQTFDTLADLGRRDVLVVFDYRRY 192 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGML 251 + ++ A + + ++L T + + A + E A+ +++ AQ Sbjct: 193 QLDVMAYASQAAALDVRILLFTDQWLSPIADLAEVTI-VSPLEVASPYDTLAPAIAQM-- 249 Query: 252 TDLLFIALIQQDLELAPERIRHSEAL 277 + L ++ + A RI E + Sbjct: 250 -EALTAHIVSTLGDDARARIERIEKV 274 >UniRef50_Q1QYR8 Transcriptional regulator, RpiR family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QYR8_CHRSD Length = 305 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 103/278 (37%), Gaps = 12/278 (4%) Query: 12 QGLAQSDKKLA--DYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLA 69 L S K +A + LL QP+ S QLA GV S + + + LG +GF AL+ Sbjct: 29 PELKLSAKGVALLEALLAQPEAVSLSSISQLAQRHGVHPSRLTRLSHALGLEGFKALQTL 88 Query: 70 LSEALASQ---PESPSVPIHNQIRGDDPLRLVGEK--LIKENTAAMYATLNVNSEEKLHE 124 + L+ + + + L ++ + A + +L Sbjct: 89 FRDDLSDSAFYSTRAQRLLEFGETPRAEGAELADDRMLWQQEMQNLSAAVEALDTAQLAR 148 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSPDDLL 183 ++ ARR+ + G+ AS A A+ L + V + DDL+ Sbjct: 149 AAVAIQRARRVHVVGLRASFGAAHYLAYYLDYLRDGVQLVSPQAGVSVEQALRLGEDDLV 208 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + I++ R + G +LA+T + + L L A E A +S Sbjct: 209 IGIAFRPESRMSVDYCRLAVEQGASLLALTNHSASQLAALTELTLLAPA-EGAFFFNPMS 267 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + ML +LL + + A +R EAL+ +L Sbjct: 268 S---LFMLVELLLSRVARDMGHDAVLALRQREALISRL 302 >UniRef50_Q13RF5 Transcriptional regulator, RpiR family n=3 Tax=Proteobacteria RepID=Q13RF5_BURXL Length = 314 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 52/277 (18%), Positives = 111/277 (40%), Gaps = 10/277 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + RI + Y L++ D++LAD +L P ++ +LA A VS+++ +F QKLGY Sbjct: 35 SIESRIAECYDELSEIDQRLADVILSAPGQLAMQTATELAATAQVSKATTTRFFQKLGYA 94 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDP--LRLVGEKLIKENTAAMYATLNVNSE 119 + A + A A+Q + + ++ R + L V + ++ + +T Sbjct: 95 SYD---DARAIARAAQVGGSPLYLQDRGRKNASTKLDDVIQAHLQHEVENLASTYRSLDT 151 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL-ATVQASS 178 L E V + ARR+++ G S VA +L+++ + + L + S Sbjct: 152 RVLSEVVEAVAHARRVVIIGYRHSHTVATMIRRELIQVRSDVVLLPAPGDTLGEYLGDLS 211 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D+ + + + LAA + G ++ ++ + A + + Sbjct: 212 AKDVAIVVGLRRRVPAVGLAATALAEAGVPIVYMSDVIAGKPARLARWVIRCHTDGLML- 270 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 + + +L+ + ++ LE ++ E Sbjct: 271 ---FDSNVGMTAVVNLICSLVAERLLERGTNHLQRVE 304 >UniRef50_C1YMF9 Transcriptional regulator n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YMF9_NOCDA Length = 296 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 60/274 (21%), Positives = 118/274 (43%), Gaps = 10/274 (3%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 R L+ ++ + D+LL +P A S+ +LA+ G S ++VV+ A+ LGY G LK Sbjct: 3 ARLDSLSPRERAVTDFLLDRPSEAVTASAAELASRTGTSDATVVRTARSLGYGGLRELKR 62 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 A+ + + P++ + ++ R V ++++ ++ + V V + Sbjct: 63 AV-MDMLTTRRDPALVLDQRLERLSGTR-VFDQVLADSVDLLRGLPEVLDAGAFDTAVRL 120 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSPDDLLLAIS 187 + +A R + GIG + A+ FA +L ++G + L + DD ++ + Sbjct: 121 VEAAGRTVAYGIGPASATARYFAVELGRMGRRCTVLEATGFRLADDLLGIGGDDAVVVFA 180 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHA 247 + RE++ D VG V+ +T A+++R L T + S + S A Sbjct: 181 PLRLFREIDALLDHAAEVGAPVVVVTEAVGEAVRERVEAVLTTP----PSTSGAASENLA 236 Query: 248 QGMLTDLLFIALIQQDLE---LAPERIRHSEALV 278 ++ L + L +D A +R+ V Sbjct: 237 SWLVAHALTMELAARDRTGSVAAHQRLNRLRRAV 270 >UniRef50_C9XKC4 RpiR-family transcriptional regulator n=3 Tax=Clostridium difficile RepID=C9XKC4_CLODC Length = 254 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 89/261 (34%), Gaps = 21/261 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + Y +DK + + +L + LS + A++ +S S++ +FAQKL Sbjct: 1 MKIEGLFNKYYNSFTANDKYICECILNHKEDCIKLSIDEFADKYHISTSALSRFAQKLQL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ L++ + +L+ + ++ Sbjct: 61 PGYSELRVIIRLNETEVEYKNQSK---------------HQLMDCYNKVIDD----IEKK 101 Query: 121 KLHECVTMLRSARRIILTGIGASG-LVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++ A RII+ G G S V + + G V + A Sbjct: 102 DCSIMFERMKKANRIIVFGEGYSQERVVKEMKRIFLPTGKIIYDVYGYDMIQALNHFIKT 161 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD++ IS G + A EM G +++IT N L + LY + + + Sbjct: 162 DDMIFFISLNGDTSTIIDFAKEMRMKGTYMVSITKMISNPLARLCDENLYIQSISISVDK 221 Query: 240 A-SISACHAQGMLTDLLFIAL 259 +L +LL+I Sbjct: 222 QLDYDVTTPYFILIELLYIKY 242 >UniRef50_C3RQD3 Predicted protein n=1 Tax=Mollicutes bacterium D7 RepID=C3RQD3_9MOLU Length = 261 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 44/270 (16%), Positives = 93/270 (34%), Gaps = 13/270 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M +I Y L ++KK+ +L P+ S N S+S++++FA+KLGY Sbjct: 1 MKFKEKISIYYTSLTPTEKKICTKILDNPEIIIKNSIIDAGNRCDTSKSAMLRFAKKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ K A+SE S+ ++ ++ +++ ++Y +++ E Sbjct: 61 SGYSEFKYAISEDYDSKQNDETIDVNESF---------LKRISSLFAESVYNLGDLDYEL 111 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L + M+ + GIG + A + L V D + + Sbjct: 112 QLQQLAKMIDEYSYVKSIGIGNTAFCANQLVYSLYSYNKFIECVGDCIQFDYLKNCLNSE 171 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 LL+ S T + G K++ IT + L + ++ + Sbjct: 172 YLLIIFSVTCSETKYLDLVKTAKNKGAKIVVITMNNEHKLISLSDLSFILPSQTSPLQNK 231 Query: 241 SI----SACHAQGMLTDLLFIALIQQDLEL 266 + +++ + Sbjct: 232 KVLKQLDNRTMMYFFAEIISYYYGLHLEKK 261 >UniRef50_B5XW96 SIS domain protein n=11 Tax=Enterobacteriaceae RepID=B5XW96_KLEP3 Length = 300 Score = 140 bits (355), Expect = 4e-32, Method: Composition-based stats. Identities = 44/278 (15%), Positives = 100/278 (35%), Gaps = 12/278 (4%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 R R R L+ + + Y+ + ++ ++A S ++VV+ Q LG+ G Sbjct: 17 ERYRARAHQLSPRLRAVVSYINDNREVVLEHTAMEIATATQTSDATVVRAIQALGFAGLR 76 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 LK + + S + + +++ + ++ + + Sbjct: 77 ELKQTMERWFGTSVTSAKKMRSTVTALSSDVNSSIDFVLEGHQRVCEVLSRADNRAAVAQ 136 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSPDDLL 183 V +L AR++ + GIGASG++A+ A +IG A + +L + D+L Sbjct: 137 AVALLSDARQVGIFGIGASGILAEYTARLFSRIGLPAYVMNRTGFSLAEQLIGLQRGDVL 196 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + + RE E R+G + +T + Q A + S Sbjct: 197 IMMGQKSPHREGMTTLREAKRLGIPTILLTQAVDSRFSQEAQVVIDVP------RGGD-S 249 Query: 244 ACHA----QGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + + +++ +++ + + ++ L Sbjct: 250 SRMPLHGTVLVCLEMIVLSVASTTPQKTVKSLKRINDL 287 >UniRef50_A1VUM9 Transcriptional regulator, RpiR family n=4 Tax=Comamonadaceae RepID=A1VUM9_POLNA Length = 303 Score = 140 bits (355), Expect = 4e-32, Method: Composition-based stats. Identities = 53/276 (19%), Positives = 118/276 (42%), Gaps = 8/276 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R+ + Y L+ +D++LAD ++ + S+ +LA AG S++S +F Q+LGY G Sbjct: 24 LDARLLKVYDQLSATDRRLADVVIARKKDLLAYSATELAGLAGASKASAARFFQRLGYAG 83 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F + + + SQ + R + + ++ + A + + L+ +++ L Sbjct: 84 FSDFRQQVRAQV-SQQSPLARIGRTPARPSESAS--LQAHVQNDVARLGSLLDGLTQDVL 140 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASSPDD 181 + + +L ARR+ + G + A + L ++ + + + + + D Sbjct: 141 EQALELLVRARRVWIVGYRNGCMTAFYASALLSQVRHDVNLLNELSGREAEILADLNDKD 200 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +LLA+ + L G +VL +T +AL +A+ L+ ++ + Sbjct: 201 VLLAVDFRRRTSRLPRIVAAARSTGARVLLLTDTPLSALASQAAAILHCPSQTEQV---- 256 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + + L + L ++ + + A R+ E+L Sbjct: 257 FDSYVSAVSLMNYLATSMAARTRKQARARMSRIESL 292 >UniRef50_Q1YL64 Possible transcriptional regulator n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YL64_MOBAS Length = 278 Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats. Identities = 52/265 (19%), Positives = 92/265 (34%), Gaps = 6/265 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L + + L + K+ A L D + +A A V S+ ++F Q LG G Sbjct: 18 LLASLDRIDGTLPKRLKQCAICLRANLDRVAVSTVADMAQLAEVPPSAFMRFCQTLGLSG 77 Query: 63 FPALKLALSEALASQPESPSVPIHN-QIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + ++ A + + + G + + ++ ++ Sbjct: 78 YSEMQALFRAEYAQMRPDYTERLTRLRAEGVSGAGRLAADFAEAGIRSLMDMSKELDAQQ 137 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L L AR I L G+ + V A+ L K+G + + + A PDD Sbjct: 138 LQAVAERLAGARTIHLVGLRRAFAVVVYLAYLLDKMGVASMLHHTTG-QIESDHAIGPDD 196 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L A+++ +E A + G VLA++ T L + A + L E Sbjct: 197 ALFAVTFAPFSQETLTLAARVSERGIPVLAMSDTTSCPLAEVAENLLIAREVEV----GG 252 Query: 242 ISACHAQGMLTDLLFIALIQQDLEL 266 A +A L L +A+ E Sbjct: 253 FRAPNAGLALVTALAVAVGGLRKEK 277 >UniRef50_B9KVH6 Transcriptional regulator, RpiR family n=2 Tax=Rhodobacter sphaeroides RepID=B9KVH6_RHOSK Length = 280 Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 99/265 (37%), Gaps = 7/265 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + R+ + + + + A YL+ PD ++ +A AGV S++++FA+ G++ Sbjct: 13 DLCTRLAADLETMPKRLAQTASYLVAHPDEVAFGTTASIAEGAGVQPSTLIRFAKANGFE 72 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDD--PLRLVGEKLIKENTAAMYATLNVNSE 119 GF L+L E L + +S + + D P R V I ++ Sbjct: 73 GFSDLQLLFRERLRDRNQSYDSRLATLGQDADQVPSRAVLNGFIAAGQESLAWLQRDMDL 132 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHAL-LATVQASS 178 ++ +L A + L + + L K+G + ++ + + + Sbjct: 133 DQFDAAAALLARAGTVYLVARRRAFPPLIQLRYALAKLGIRSEICGSVNGIDNDLLAFAG 192 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 PDD + IS+ + AA++M ++AIT + L A L + Sbjct: 193 PDDAAILISFAPYTAQTIEAAEQMRAQEVPIVAITDSRLSPLCTGAGARLLLA----EAD 248 Query: 239 SASISACHAQGMLTDLLFIALIQQD 263 A A L L +A + Sbjct: 249 YAGFRTSTAAMTLVMALSVATAEHR 273 >UniRef50_C6CS19 Transcriptional regulator, RpiR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CS19_PAESJ Length = 277 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 102/274 (37%), Gaps = 12/274 (4%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L + +++ADY+ D + + +A GVS S+V +F ++G K K + + Sbjct: 8 KLTRGHQRIADYISKNMDDVPFMIEEDIAAACGVSVSTVSRFWAEVGSKNLKEFKQRVKD 67 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 + P +++ GD + + + + + ML A Sbjct: 68 EVLLSPARKLQSAFDKVGGDSGAAANVLSVADY----LQQSADRIDQAAFDAAAAMLAGA 123 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNA-AAVRDMHALLATVQASSPDDLLLAISYTGV 191 + + G G++ + ++L + G + R H L ++ P+D+++ + Sbjct: 124 GTVHIYGPGSAECLTALMDFRLSRFGADVRRLDRGGHELFESMVPIRPEDVIVIFGFVSE 183 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGML 251 E+ + D G + L IT + + +A L+T + A + Sbjct: 184 SPEMAVLLDFARERGCRTLLITDLAVSPMLAKADISLFTA----RGQLWEFHSMVAPIAV 239 Query: 252 TDLLFIALIQQDLELAP---ERIRHSEALVKKLV 282 + L +A+ ++ + A E + KL+ Sbjct: 240 IEALIVAVGKEWEQAALAGSEELHRLRRKYAKLL 273 >UniRef50_C7M1X3 Transcriptional regulator, RpiR family n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M1X3_ACIFD Length = 279 Score = 140 bits (353), Expect = 6e-32, Method: Composition-based stats. Identities = 53/283 (18%), Positives = 107/283 (37%), Gaps = 12/283 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + R+R+ L + +++A+ +L + +A A VS +V++F KLG+ Sbjct: 3 SLAERVRRVAPELGPAQRRVAEAVLREYPVVALERLADIAALADVSPPTVLRFVAKLGFS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + A E + + SP + GD + + + + + Sbjct: 63 SVEEFRSAAREEIGERLASPLERLEVTGPGDVGSAE------ADLIDQIRRSFVGLAPQS 116 Query: 122 LHECVTMLRSARR-IILTGIGASGLVAQNFAWKLMKIGFNA-AAVRDMHALLATVQASSP 179 L VT+L RR ++++G S +VA++ AW L + + + A + + Sbjct: 117 LDTVVTLLADVRRPVVVSGGRVSDVVARHLAWTLEVLRPSVRHVPPEAGARVNALLDVDA 176 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 ++A + + E + G V+ +T + +S L T + Sbjct: 177 STTVVAFDFVRYQLETARFVTAASQAGATVVLVTDPGLSPAAPGSSVVLTTQVDGP---- 232 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 A L + + A++Q+ E A R+ E L + LV Sbjct: 233 GIFDALTPALALVEAIIAAVVQRIGEPARRRLARYEELTRALV 275 >UniRef50_C7RFE2 Transcriptional regulator, RpiR family n=1 Tax=Anaerococcus prevotii DSM 20548 RepID=C7RFE2_ANAPD Length = 243 Score = 140 bits (353), Expect = 6e-32, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 107/260 (41%), Gaps = 26/260 (10%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + I + L++S+ + D + H++ L+ VS S++ +FAQKLG+ G Sbjct: 9 IMDIISSKNIKLSKSENIIVDKIKDINVDFSHININDLSEILKVSNSTITRFAQKLGFDG 68 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK +S+ + +++ ++ A E+ L Sbjct: 69 FSELKFDISKKPRRTK------------------SLSQEIYINFINSIEA----FDEKTL 106 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF-NAAAVRDMHALLATVQASSPDD 181 + S RI + GIG+SGL A F +K +IG N ++ +++ ++ D Sbjct: 107 S-FIKSFDSFGRIAVIGIGSSGLCANEFVYKFGEIGLNNTDYAKEPYSINLLTKSLDAKD 165 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 LL+AIS +G L +LAITG + L+ A++ + + S Sbjct: 166 LLIAISLSGENNNLLEGVRFAKDKNANILAITGNNESTLKNIATNTILLPP--YPSYSYK 223 Query: 242 ISACHAQGMLTDLLFIALIQ 261 IS ++ D++ A + Sbjct: 224 ISKIFPVTLILDMICEAYLS 243 >UniRef50_A4JPM3 Transcriptional regulator, RpiR family n=11 Tax=Burkholderia cepacia complex RepID=A4JPM3_BURVG Length = 292 Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats. Identities = 47/278 (16%), Positives = 106/278 (38%), Gaps = 7/278 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + + S++K+A LL + + A +A VS +V +F ++G+ Sbjct: 4 SIRALLLSQMDSFTPSEQKVAHALLDRYPSLGLGPIASFAKQAEVSDPTVFRFVVRIGFP 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + + + AL + + + SP + +R + + + ++ T++ Sbjct: 64 NYSSFQQALHDEIDAAMNSPLARMDA-FHSKTGMRDSHAAIFERLSQSLATTIDGLDAAA 122 Query: 122 LHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASSP 179 V +L + R+ G + +A F++ L + V +++ ++ P Sbjct: 123 FDAAVALLAAPEVRVFCGGGRYTAPLASLFSFTLAYARPHVHYVEPNVNVASVSLADMEP 182 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+L+ + +++ A +G +VL IT + + A L + Sbjct: 183 GDVLVIFDFRRYQKDSVRFAQAAHALGVRVLLITDEWRSPISAFAEIVLRILGR----PF 238 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 A + L + L I + + ELA +R+ E L Sbjct: 239 AMLQTNVPALALAEALVIGVTNRLPELARQRMEKIERL 276 >UniRef50_C9M9T3 Putative SIS domain protein n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M9T3_9BACT Length = 292 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 53/288 (18%), Positives = 89/288 (30%), Gaps = 22/288 (7%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N IR RY L + + AD +L P++ ++ + LA AGVS+ +V+ LG++ Sbjct: 4 NVTDVIRSRYGKLTKKQRLTADIMLADPESMAFMTLRDLAAAAGVSEMTVLHTCAALGFE 63 Query: 62 GFPALKLALSEALAS------QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLN 115 + LK L Q + + + ++ E Sbjct: 64 NYNQLKYEFRRYLTLKAKVDIQEQCGYPNMEVPSYELSEPAKLMAQICDEEAQVSRGFFE 123 Query: 116 VNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQ 175 L M+ +R ++ G S VA + +L +G A + Sbjct: 124 SVGPVSLLHAAEMIVESRVTLMAARGVSMQVADFLSMRLAIMGLPAVVMNTEQNDSLHAA 183 Query: 176 --ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE 233 L+AIS + R G +L +T + Q L Sbjct: 184 LPLLGKGVALIAISMPDYYIMTTKVCEFARRQGASILGLTDHLKAPIAQYCDLLLTAPTA 243 Query: 234 EQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + I+ L +LL A+ I S KK Sbjct: 244 TRLF----INTIGPMLSLANLLSAAV----------NILKSRHAGKKF 277 >UniRef50_Q98AI2 Mlr5989 protein n=1 Tax=Mesorhizobium loti RepID=Q98AI2_RHILO Length = 293 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 105/277 (37%), Gaps = 6/277 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 I + + + A ++ PD S + LA+ A VS +++++ Q L + G Sbjct: 6 IQALILEMLPDMPRQLALAARHIADHPDQVLVHSMRDLASRASVSPATLLRLTQTLKFDG 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + + + L S P++ + + L + + A + VNS E L Sbjct: 66 WAEFRAVYARQLLSAPDAYAERASRALDR-SGLPALLHESFAAQRANLDHAAGVNSPEAL 124 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLAT-VQASSPDD 181 +L A R+ ++ + FA+ + N + + LA + P+D Sbjct: 125 ARSAAILAEADRVFISAFMSCRGPGLTFAYLCRLLRDNVFLLGGEGSPLAADLALLRPED 184 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L I++ RE++ A + G K++ ++ + + A L E + Sbjct: 185 AVLTINFQPYGREIDGVARAVGEGGAKLVCLSDSRATQVTRVAREVLIFPVEGPSF---- 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + A L + L IA++ + A RIR E Sbjct: 241 FPSLTAAHALVECLAIAVLTHLGDSATRRIRLIEDAY 277 >UniRef50_A6X385 Transcriptional regulator, RpiR family n=2 Tax=Ochrobactrum RepID=A6X385_OCHA4 Length = 282 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 54/272 (19%), Positives = 105/272 (38%), Gaps = 9/272 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +LRI++RY L ++K+A +L + D S+ ++A AGVS+++ +F Q LGY Sbjct: 5 LVLRIQERYAKLTAGEQKIAQLVLEREDDILIHSATEIAEMAGVSKATTARFFQHLGYAD 64 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F +KL E + + + + + PL + A + T +K+ Sbjct: 65 FNEVKLQAREE---RNRTEPFEYSSTVDEEVPLVRTISAHLDLEIANITRTFEALRSDKM 121 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSPDD 181 E ++ A R+ + G+G A+ ++ + + + + + + P D Sbjct: 122 REAAELIAEAPRVWVIGLGDEEGFARYARLLFSRLRHSVMLLGINQGSWAEDLAMTGPKD 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTP-NALQQRASHCLYTIAEEQATNSA 240 +LL I+ R L ++ IT Q+ A L + A Sbjct: 182 VLLLITLPPHRALLKQILGYAATSRLNIVTITDRGSVFEAQRYARVVLPCHVDSIALG-- 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIR 272 ++ A LL + + A +R+ Sbjct: 240 --ASYTAVSSAIRLLALTYASYAGKSAQQRLE 269 >UniRef50_A3SJ61 SIS domain protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SJ61_9RHOB Length = 245 Score = 138 bits (350), Expect = 1e-31, Method: Composition-based stats. Identities = 40/241 (16%), Positives = 78/241 (32%), Gaps = 7/241 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L I L + + A Y+L +PD S + +A GV+ +++ + A ++G+ Sbjct: 1 MELLENIGDALPDLPRKLARAARYVLDRPDHVALGSMRAVAQSCGVAPTTMQRLAHEMGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + + L Q V D + ++ + + + Sbjct: 61 DSYDKFRAVFQRELVGQGFGAKVDALQDNFSDLSQGKLALTHLESVRENLDSLQASLNGA 120 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQN----FAWKLMKIGFNAAAVRDMHALLATVQA 176 + + L +R + G +A + L + A D + Sbjct: 121 AVEDFARSLHRSRHCHIIAGGTLSWLASFTEVTGSMALSNLVTPAGPAVDS---TERIAH 177 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 P+D+LL IS + RE+ A + G K A+T + + H Sbjct: 178 IGPEDMLLVISVSPYAREIISALEYARDRGAKNYAVTDRPSSPVVPLCRHAFLAPTASPH 237 Query: 237 T 237 Sbjct: 238 Y 238 >UniRef50_A8IDV1 Transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IDV1_AZOC5 Length = 327 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 47/265 (17%), Positives = 93/265 (35%), Gaps = 9/265 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + +R G+ ++AD++L P A + + LA A VS +++ +F + LG + Sbjct: 33 SLVDLVRAHRAGMTPLHGRVADFVLRHPLQAATMGIEDLAAAAEVSVATINRFVRGLGLE 92 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF + + + G D + + A + A V + Sbjct: 93 GFSQFRALAVASFRPLSPVEKLEAQAAASGRDTDH--VQASLDSGLANLRAARAVADADV 150 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQ---ASS 178 + + SA R++L G G S + A L+ + ++ Sbjct: 151 FRQAAEAVSSADRVVLLGFGLSAPLVGLLADMLIPFCRAQMILDGQGGQERMIRRAFNVR 210 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D+++A++ A M G +++ IT + L A L AE + Sbjct: 211 AGDVVIALALPRYSLSTIELARGMRSQGARIIGITDSLSSPLALEADLLLLGPAEHPLLH 270 Query: 239 SASISACHAQGMLTDLLFIALIQQD 263 ++ A L + L L + Sbjct: 271 ----ASATALVALFEALVALLTARR 291 >UniRef50_C7T7R2 Transcriptional regulator, RpiR family n=7 Tax=Lactobacillus RepID=C7T7R2_LACRG Length = 247 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 39/249 (15%), Positives = 84/249 (33%), Gaps = 24/249 (9%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 + L +++ + YL+ D L + +A S ++V++ A K+GY+GF ++ L Sbjct: 10 KNLTETEFTVLRYLVANIDRVLDLGVRGVAKANYTSATTVMRLAHKMGYRGFVEMQYKL- 68 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR- 130 + + +DPL+ L+ N + + Sbjct: 69 ---MTMLRHGEAGMQPVDATEDPLQSAV--------------LDQNDATTIRAVAQQIAA 111 Query: 131 -SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYT 189 ++ + L G SG++ Q K +G + L + +S + Sbjct: 112 VESQYLYLYAAGFSGVIGQYMFKKFQILGKRCFFSTPGDSAALLENYLEDLGLFIVVSKS 171 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA----EEQATNSASISAC 245 G + + A + + V+A TG + L + A L +E ++ Sbjct: 172 GETQSVIDKAALVSSLPVPVVAFTGNADSTLAKMADWTLKVADDFPLDELNQRASLFYPQ 231 Query: 246 HAQGMLTDL 254 ++ Sbjct: 232 MLALFELEI 240 >UniRef50_C3RLW4 Predicted protein n=3 Tax=Bacteria RepID=C3RLW4_9MOLU Length = 271 Score = 138 bits (348), Expect = 2e-31, Method: Composition-based stats. Identities = 34/252 (13%), Positives = 82/252 (32%), Gaps = 6/252 (2%) Query: 21 LADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPES 80 +A Y+ + QLA E VS +++ +F + LGY+ + LK S + + Sbjct: 24 IAWYMAHNFSKVAKMGISQLAKECYVSPATISRFCRALGYENYAHLKQECSSFASDSKKF 83 Query: 81 PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGI 140 ++ D + + + A+ + + + + + + G Sbjct: 84 NNLINVPLDMMKDKPQECTKYYSDQVCDAISKLSQRLDWNVIDKVLQAIHDSDSVAFFGT 143 Query: 141 GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG-VRRELNLAA 199 S A +F L+ + A + + + + + + ++ G R + Sbjct: 144 QFSHSAALHFQTDLLMLEKFTMAYMETERQIDCARLMDENSVAIIVTVNGFYARSNSKVL 203 Query: 200 DEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIAL 259 + + KV+ +T + ++ + EQ H +L+ + Sbjct: 204 QYLKKSKCKVVLMTNNPGIDIGINVNYTIVLGDSEQRKIG-----KHTLLTAVELMSLRY 258 Query: 260 IQQDLELAPERI 271 E+I Sbjct: 259 YSLYYPGIQEKI 270 >UniRef50_C9Q7M3 Transcriptional regulator n=2 Tax=Vibrio RepID=C9Q7M3_9VIBR Length = 284 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 40/269 (14%), Positives = 97/269 (36%), Gaps = 8/269 (2%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 + ++K + +Y + +L ++ GV ++++ +F +LG+ GF K Sbjct: 11 NNLKSTTPAEKLIIEYFIKNYTMLPFAKMDELCHQIGVGKATLGRFLNRLGFDGFIGFKK 70 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 +SE L + +P + + P + +E + + +T + + Sbjct: 71 TVSEELVQELTTPIDRCNK-LNIQSPYDELITNHYQEIVSNLESTYQLMQSNDFSLAIEH 129 Query: 129 LRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASSPDDLLLAI 186 L + + ++ + G ++ +A F + + + D L + P D+L A+ Sbjct: 130 LLNPQGKLYIMGSASAEALANYFFLLARYLRKDVIFLKADPSTLPHQLVDVEPADILFAV 189 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 SY + GGK++ +T N + + + + Sbjct: 190 SYHRFSSITVRCVRWFKQNGGKIIVLTDQQVNPFVAYSDIQFTAESHSEGL----FNNRT 245 Query: 247 AQGMLTDLLFIAL-IQQDLELAPERIRHS 274 + + ++L + I D + RI + Sbjct: 246 SGFSIIEVLIKGMSITNDKDKRFRRIEDT 274 >UniRef50_Q4A886 Transcriptional regulator n=5 Tax=Mycoplasma hyopneumoniae RepID=Q4A886_MYCH7 Length = 271 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 50/281 (17%), Positives = 110/281 (39%), Gaps = 16/281 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L I + + L +K + ++ +P + +LA +S ++ + +KLG+ Sbjct: 1 MSVLT-ISKNF-KLTHIEKLIIRFIETKPRKFVEQTINELAATLFISVGTITQLTKKLGF 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F LK + E L ++ ++QI E + ++ TL + + Sbjct: 59 NNFKELKKFVIEWLKLDEDNNLYNENDQI----------ENINLLYVHSIEKTLAILNVS 108 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +++ V + +II G +S VA F+ L + N+ +++ + + + Sbjct: 109 QINRIVDTILKMDKIITYGTASSITVATEFSNNLRNLHLNSLCAKNISDIASWIGNPGST 168 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRA-SHCLYTIAEEQATNS 239 L++ S + R+ + + IT T L++ + S +Y EQ N Sbjct: 169 CLVI-FSVSMASRDAVALTKLAKQHQINTIFITSNTN--LEKNSFSEVVYFDTLEQNNNI 225 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + +Q + DL+ + + ++ E L K Sbjct: 226 FPVGSKVSQLFIGDLISLKIRKKLNSSRSEFFNEFRRLWYK 266 >UniRef50_C8PCG0 Transcriptional regulator n=2 Tax=Lactobacillus RepID=C8PCG0_9LACO Length = 268 Score = 137 bits (347), Expect = 3e-31, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 101/268 (37%), Gaps = 26/268 (9%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + R+ ++ L+ S+K++ +L HLS +LA + VS+SS+ + +K+G Sbjct: 3 DLKRRVWEKSGELSTSEKEIVRFLFSNSKLCSHLSLAKLATKLYVSESSIFRLCKKIGLS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ L+ LS LA + + ++ I ++ A+ LN S Sbjct: 63 GYSELRFELS-DLAHERKINTIDIATEVE-----------------NAIQEVLNYCSTLD 104 Query: 122 LHECVTMLRSARRIILTGIGASG-LVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASSP 179 L + + A I L G S L+A+ +L IG + L + ++ Sbjct: 105 LEKVFLDIEHANTIYLYSTGWSQELIARYLLHELFMIGKKVVMLPSAIEELKMVSKRATE 164 Query: 180 DDLLLAISYTGVRRELNLAADEML--RVGGKVLAITGFTPNALQQRASHCLYTIAEEQA- 236 D+L +SY+G ++ ++ ++ T P L + + + Sbjct: 165 GDMLFIVSYSGDNVQIRDEISKIQLINNKIITVSFTTLRPAKLVSLVDYSFFFRTLKLKK 224 Query: 237 ---TNSASISACHAQGMLTDLLFIALIQ 261 A+I + DLL Q Sbjct: 225 FWVEGDATIDSFSPAYTFIDLLIAKYYQ 252 >UniRef50_C6BI14 Transcriptional regulator, RpiR family n=6 Tax=Ralstonia RepID=C6BI14_RALP1 Length = 302 Score = 137 bits (347), Expect = 3e-31, Method: Composition-based stats. Identities = 45/280 (16%), Positives = 94/280 (33%), Gaps = 5/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + +R R L+ ++ A L LS + LA + ++ + A+ LG+ Sbjct: 5 GLMQTLRDRAADLSPQLQRAAMLLETHQRDIALLSMRDLARRCDLPPATFSRLARALGFD 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F AL+ L Q + + D E++ + + + + + Sbjct: 65 DFAALRDVCVNHLRQQADGFAGRASALQGEDAAGASEAERIGMAIGSHVQSAFSPANMAA 124 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASSPD 180 L L ARR+ L G + + F + + L ++ Sbjct: 125 LDIVAAALCRARRVYLLGARSCLALTHAFGYAAQLFDDKVTLCAGSGNTLADPLRFCGEG 184 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++A+++ RE+ A G +++ +T + A L + Sbjct: 185 DIVVAVTFDPYTREVIEAMQYAHARGARLVYVTDSAIAPGAELAWQHLVAPVAIPSF--- 241 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + A L D L + + A + S+A +K+ Sbjct: 242 -FHSLAAPMALLDALLMTWFRHAGPAALTHLADSDAQLKQ 280 >UniRef50_B1R0N4 SIS domain protein n=2 Tax=Clostridium butyricum RepID=B1R0N4_CLOBU Length = 279 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 46/269 (17%), Positives = 96/269 (35%), Gaps = 10/269 (3%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 +++K + D++L + + + ++ G+SQ +V +F +K+GY K A+ Sbjct: 10 NFTKNEKIIYDFILSKKENLFLYTEIDISKMTGISQPTVSRFWRKIGYTNLKEFKEAVK- 68 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 + S P D + K++ + + + SE ++ V S Sbjct: 69 ----DFHNQSSPSTKFKSILDSDEFYYKNYAKKSISLIEDSAEKISESDFNKAVEYFISC 124 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLAT-VQASSPDDLLLAISYTGV 191 +I GIG + + ++L + G N ++ LL + D+L++ ++ Sbjct: 125 DKIFTHGIGPAESLCSLLNFRLNRFGLNIDSINPSGQLLYEDLINIDKDNLIVLFLFSHY 184 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGML 251 E ++ D + KV+ IT Y E + Sbjct: 185 HPETHVILDYATEINCKVIIITDILIKPFNNHNIITFYVSRGELLE----FHSLVGPLFF 240 Query: 252 TDLLFIALIQQDLELAPERIRHSEALVKK 280 + L +A+ E++ E L K Sbjct: 241 IESLIVAIGISKSNEPLEKLHKLEELRNK 269 >UniRef50_UPI0001909264 RpiR family transcriptional regulator n=1 Tax=Rhizobium etli CIAT 894 RepID=UPI0001909264 Length = 309 Score = 137 bits (345), Expect = 5e-31, Method: Composition-based stats. Identities = 45/274 (16%), Positives = 104/274 (37%), Gaps = 12/274 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + +R+R G + S++ LA Y+L + + +A GVS+ +V +F + LG++ Sbjct: 21 DIEAILRERMSGFSPSEQSLAGYILDNIEILPFETGSSIAEAVGVSEMTVTRFVRGLGFE 80 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 LK L A++ + + + D + ++ ++ A+ + + E Sbjct: 81 SLRDLKKRLRVAVSEKDSEVD-DYLARFQMRDGRQPQLQESLRLELDAIVKAYALTTTEV 139 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD- 180 E +L AR I + G AS +A +FA +L+ N + + + + P Sbjct: 140 WDEAAGLLVKARIIYVVGFQASKGLAMDFASRLLWARPNVIFIDNSSGTFGEIINADPKQ 199 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI--AEEQATN 238 ++ I +++ + ++ +T + + E T+ Sbjct: 200 SAVVLIDTASYATRGIKLVEKLKSMDMPLVIVTD-------KFSHWAFAYTRFVFEAHTH 252 Query: 239 SASI-SACHAQGMLTDLLFIALIQQDLELAPERI 271 + + + ++ +LL A+ + A Sbjct: 253 VKTFWDSTASISVVLNLLIDAVATKLGPKAKRNF 286 >UniRef50_A4VW77 Transcriptional regulator n=1 Tax=Streptococcus suis 05ZYH33 RepID=A4VW77_STRSY Length = 189 Score = 137 bits (345), Expect = 5e-31, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 73/181 (40%), Gaps = 6/181 (3%) Query: 96 RLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLM 155 R + +K++ + + AT + EEKL E ++ S++R+ GIG+SGLVA + M Sbjct: 10 RSLAKKVLVDYEEILTATNKLVDEEKLEEIAKLIDSSKRVYFYGIGSSGLVAMEIKSRFM 69 Query: 156 KIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT-- 213 ++G A+ D + L+ T L++ +S +G E+ + G +T Sbjct: 70 RLGVVCDAITDENNLIWTTNILDDSCLVIGLSLSGQTEEVMEHLQLAAQKGIPTALLTTR 129 Query: 214 GFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRH 273 F + + IS ++ D+++ + D E + Sbjct: 130 SFPHPTF----DQIIPVASVRHLNYGNRISPQIPLLIMLDIIYAYFLAIDKEKKENIFKQ 185 Query: 274 S 274 + Sbjct: 186 T 186 >UniRef50_Q1GH80 Transcriptional regulator, RpiR family n=6 Tax=Rhodobacterales RepID=Q1GH80_SILST Length = 295 Score = 136 bits (344), Expect = 7e-31, Method: Composition-based stats. Identities = 50/285 (17%), Positives = 112/285 (39%), Gaps = 24/285 (8%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 + R+++ L+ + A Y++ P S + A +A VS ++V+ +++LG+ + Sbjct: 10 ITRLKEELSDLSPRLQVAAKYIVDHPADFGLDSIRDTARKAEVSTYTLVRISERLGFDSY 69 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAM---YATLNVNSEE 120 ++ AL + + V I +G+K + +M +L + Sbjct: 70 EDMRDPFRVALVAPTQF--VDAPEWINRWRESGELGQKQAEAALNSMAIVQRSLEGQNLR 127 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA--LLATVQASS 178 +L ML A+ + LT + AS +A F + ++ + + H + + + Sbjct: 128 QLQRVAEMLLGAKNVYLTAVRASYSIAYYFHYV-GRMALPSLQLIPRHINSAIDELNYAD 186 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT-IAEEQAT 237 D+++AI+ T RE A + + G K++ I+ + + E+ Sbjct: 187 EGDVMIAITLTPYSRETIEACEFARKKGVKLVMISDSE----------VISSKFTPEETL 236 Query: 238 NSASISAC-----HAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 ++++S + + L L+ + +RI E L Sbjct: 237 VASTLSTHHFGCYTGVMAVAENLVSLLVALGGQDVKDRITSYETL 281 >UniRef50_Q03HM4 Transcriptional regulator n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03HM4_PEDPA Length = 193 Score = 136 bits (343), Expect = 9e-31, Method: Composition-based stats. Identities = 41/200 (20%), Positives = 81/200 (40%), Gaps = 8/200 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + + L ++++ L DY++ + ++ S +++A E VS ++ ++F +K+G+ Sbjct: 1 MNFFDIVEPHLKMLTKNEQVLFDYVVSNMNKIKNQSIREVAGETYVSTATFLRFVKKIGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF + + ++ + P ++ D +E + ++ V + Sbjct: 61 AGFSEFTTVIKYTVLNENTKKTEPTPFEVSQTD--------YREEYLKNIIESVRVIPIK 112 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 KLHE L I L G S A+ + GFN RD + P+ Sbjct: 113 KLHEITKKLSDHPTIYLFSKGVSKYAAEYVYYIYTMAGFNVKYPRDYDFRQIASKQVKPN 172 Query: 181 DLLLAISYTGVRRELNLAAD 200 DL+ ++Y G E Sbjct: 173 DLVFILTYNGKNLEFVEMIK 192 >UniRef50_Q6A765 Transcriptional regulator, RpiR family n=3 Tax=Propionibacterium acnes RepID=Q6A765_PROAC Length = 296 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 53/281 (18%), Positives = 107/281 (38%), Gaps = 7/281 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + R+ + Q + +D +A Y + +++ G S +SV +F +KLGY Sbjct: 16 SLYTRLGE-LQAMTPTDAIIAQYCEDSFPHVALENLDEISAATGTSTASVTRFVRKLGYA 74 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F +L E +A+ + PS N D+P + K+ + ++ LN E Sbjct: 75 SFRDFSRSLREEVAANFDLPSDRTTNDPMTDEPGAMWRSKM-EAARRSIDIGLNSLDGET 133 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMK-IGFNAAAVRDMHALLATVQASSPD 180 V +LR R + A+G ++ L++ + + + + + Sbjct: 134 FDRVVELLRDDSRPLCLVAAATGHALLDYFRLLVRYYRRDVILLDSTDRMAHQLIDLPDN 193 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +LLA + R + + + +T + +++ A H L +E S Sbjct: 194 AILLASVFDRHSRMVESVLRLFHQRNMTTVLLTNRSSTPMRRYADHVLLVSSES----ST 249 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + +L + L AL D E+ R+ + L +L Sbjct: 250 AFRSRACYLILLESLVAALAPADHEVERFRVETMQGLFDEL 290 >UniRef50_D2BP23 Transcriptional regulator, RpiR family n=3 Tax=Lactococcus lactis RepID=D2BP23_LACLK Length = 247 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 93/250 (37%), Gaps = 14/250 (5%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 L + + +YL ++ Q+A A VS SS+++ +K + GF K Sbjct: 1 MNHLTSVEIYIWNYLEENKAKIIQMTVAQIAESAHVSPSSIIRTLKKKNFSGFSEYKNME 60 Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 + L + +++ EN + T+ + E L + V + Sbjct: 61 KQKLNRHDWIYGLTKD------------ANQVVSENIEELLMTVRLLESENLAKVVENIF 108 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 A +++ G S +A +FA L + A ++ + ++ + ++ +S +G Sbjct: 109 HAASVVIISRGLSVRIADSFARDLQFLDVKAVSLYQDNMQAY-LEKLPRNTFVIGLSLSG 167 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS-ASISACHAQG 249 + A + R G KVLAITG + L +++ L + + + Sbjct: 168 ETDLIVATAQKAKRDGKKVLAITGNYKSRLVEQSDLLLLAYQKNLSGKILVDYNNMLPLE 227 Query: 250 MLTDLLFIAL 259 ++ LL Sbjct: 228 LIIHLLIQLY 237 >UniRef50_UPI0001AF5353 RpiR family transcriptional regulator n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF5353 Length = 311 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 51/282 (18%), Positives = 106/282 (37%), Gaps = 10/282 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + IR RY+ ++ ++KL+D +L P ++ +LAN AGVS+++ +F + LGY Sbjct: 15 SLESSIRGRYEQMSALEQKLSDVILASPGQLAMQTATELANHAGVSKATTTRFFRSLGYD 74 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDD-PLRLVGEKLIKENTAAMYATLNVNSEE 120 + + S + +D + + + + + A + T + Sbjct: 75 SY----ESARREARKASTGGSPLYLQHLGDEDRDPQALIQHHLDQEVANLVKTYGSLDQT 130 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSP 179 +L E + ARR++L G S +A F L+++ + + L + Sbjct: 131 ELFEIAQAIAKARRVVLIGYRHSQTIAVMFRSNLIQVRGDILLLPAPGDSLAEYIAGLDE 190 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+ + I +L A M R+G ++L I+ + A + Sbjct: 191 RDVAICIGLRRRVPQLESATSAMSRLGVQLLYISDVLAGTPAKLARWVIRCHTAGSLM-- 248 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + +T+LL + ++ P + K Sbjct: 249 --FDSNASVSSITNLLCSLVGKELPAKNPPTWHRLRSCTKNW 288 >UniRef50_C3WCJ9 Predicted protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WCJ9_FUSMR Length = 241 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 111/253 (43%), Gaps = 33/253 (13%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 LL+ R+ L +S+++L D++ + S+ +L EA SQ+++ + +KLG++GF Sbjct: 11 LLQTREIRISLTRSEEELMDFIEKNFKEIPNYSAIKLCEEAYSSQATLNRVCKKLGFRGF 70 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 LK ++ E L S + IHN I D + E++ Sbjct: 71 SELKFSIEEDLKLMENSKNSYIHNTIYYIDN----------------------INFEEID 108 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 + +L++ R+I+L G+GAS + A F +L+ +GF A + + + + DD + Sbjct: 109 NIIKILKNNRKILLYGLGASQITAAYFQRQLLYLGFQAIMISEEKMMESF------DDFI 162 Query: 184 L-AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + IS +G + A M +G V+AIT + + + + ++ Sbjct: 163 IFIISSSGETLRVKHIAKNMKELGRIVIAITKKDSS----LDEIVSSSFTHNLSIDKLNV 218 Query: 243 SACHAQGMLTDLL 255 A Q + ++ Sbjct: 219 IAREQQLHMIIMI 231 >UniRef50_C1YLY0 Transcriptional regulator n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YLY0_NOCDA Length = 277 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 101/268 (37%), Gaps = 9/268 (3%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L ++ +++ L +P A + S+ +LA AGV+ ++VV+ AQ LG+ G+PAL++ L Sbjct: 13 RLGRAAERVVRVLRDEPRFASYASTAELAERAGVNVATVVRAAQALGFTGWPALRVELRS 72 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 + + V + DP+R + + + ++ + A Sbjct: 73 RYLASLSAGEVLAEHAGSDADPVREA----FRADREGLRDLERTLDPARVRALAGAVHGA 128 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAA-AVRDMHALLATVQASSPDDLLLAISYTGV 191 RR + G G A +G++ L++ + P DLLLA + Sbjct: 129 RRTRVVGSGTFAAPGVQLAHAAGIMGYDVERLELGGTGLVSALARMGPGDLLLACDLWRL 188 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGML 251 L AA V IT + L + A+H L +E + + Sbjct: 189 PVALRSAARVARERSVPVAVITDRRDSPLAEGAAHVLLVPSE----GVGMFPSLTPVMAV 244 Query: 252 TDLLFIALIQQDLELAPERIRHSEALVK 279 + L + + +R +E L + Sbjct: 245 VHAVLAELARLGGDEVLAAVRDTERLWE 272 >UniRef50_C9A748 Transcriptional regulator n=1 Tax=Enterococcus casseliflavus EC20 RepID=C9A748_ENTCA Length = 245 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 43/252 (17%), Positives = 94/252 (37%), Gaps = 24/252 (9%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 + ++ + +L Y+L Q +S ++LA+ S ++V++F +K +GF K+ L Sbjct: 8 KSFSKKEWQLFQYVLNQQAEVCSMSIRELADATKTSSTTVLRFCRKFDCEGFSEFKIKLK 67 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE----EKLHECVT 127 + L Q ++ ++L K++ A++ E E L Sbjct: 68 KTLQKQGKT-------------------DRLFKQDKKALHYFFERMDESFYRETLLTIAK 108 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAIS 187 + + +IL S L K ++ + + + + + S + LL S Sbjct: 109 RISKTKLLILASDRESTLALTYAQQKFARLDKIVSVEEEAAPIKSVWRTLSSEATLLVFS 168 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHA 247 G L E G +++T + ++ + + + + S+S+ Sbjct: 169 NKGADPFLESLITECTTAGISTISLTNRSTTSIAKLSERNFAYYFSDNQ-AADSLSSQIP 227 Query: 248 QGMLTDLLFIAL 259 L +LLF + Sbjct: 228 AIYLVELLFDLV 239 >UniRef50_Q7D403 Transcriptional regulator, RpiR family n=2 Tax=Alphaproteobacteria RepID=Q7D403_AGRT5 Length = 292 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 54/276 (19%), Positives = 114/276 (41%), Gaps = 9/276 (3%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 I + L +D +L D L+ P A + + +++ AGV +S V+ A++LG+KG+P Sbjct: 12 DLISRHSTRLTDADTRLLDVLIKDPIRAAMENGKDVSSRAGVHPASAVRLARRLGFKGYP 71 Query: 65 ALKLALSEALASQP---ESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 ++ L L E+P+ + ++ + + ++ AA+ N S+ Sbjct: 72 EFRVFLQSNLREGGGDFENPAARMAARLMRAED-NGLLASVLDSEIAALQQARNSVSDAD 130 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAA-AVRDMHALLATVQASSPD 180 + T LR +RRI + G G ++ A +L + G+ A MH L+ + + + Sbjct: 131 IRAFSTSLRDSRRIFIFGRGHFAALSSLIALRLSRSGYEAIDLASQMHQLVEVLATLTAE 190 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D++L +++ L + R G K LA+T + H + + Sbjct: 191 DVVLFLAFRRAPPLLQEVREIAGRRGAKTLAVTDVGGTRIDPAPHHQILVSRGDP----G 246 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + + + + + L D + + + ++ Sbjct: 247 ESQSLVVPMTIANAIILDLASIDNGRSLQSLSEFKS 282 >UniRef50_A3K8P8 Sugar isomerase (SIS) n=2 Tax=Rhodobacteraceae RepID=A3K8P8_9RHOB Length = 291 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 52/280 (18%), Positives = 110/280 (39%), Gaps = 11/280 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R+ Y + + +++LAD LL +L++ LA++AGVS+++ + ++LGY G Sbjct: 16 IAQRLLSTYDEMPRGERRLADLLLEDVGVLGYLTASDLADQAGVSKATAARLFRRLGYHG 75 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + + + E +++ +P VP + + + + T E++ Sbjct: 76 YRDAQREVRENKSTKAAAPEVPALSGGFLS------PGEYLDAEVKHLVRTFETLPAEQM 129 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL-ATVQASSPDD 181 E V +L A ++ + G G +A L+K+ + + + + +P+D Sbjct: 130 SEAVEILCRAAKLWVVGFGEGYPLALFARALLIKVFPDIRMIPLSGFPVPEEFASINPED 189 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +LA E R G KV+ +T ++ A L ++ Sbjct: 190 AVLAFGVGRRTDEFRNVIGSSRRAGAKVILVTNSIAAGDKRGADLIL----RGRSEGPTV 245 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + A L L + + + A R+ H E++ + Sbjct: 246 FGSMTAPLSLVTYLCARVATRTGDSAQRRLDHIESIHSQW 285 >UniRef50_A6TPC3 Transcriptional regulator, RpiR family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TPC3_ALKMQ Length = 284 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 43/272 (15%), Positives = 105/272 (38%), Gaps = 15/272 (5%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N RI + L + LA Y++ A LSS +L + S ++V++F+ LGYK Sbjct: 4 NFFQRIHASKENLTKKQMNLAQYIVHNYKKAIFLSSSELGRKINASDATVIRFSHALGYK 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF + AL S S + + ++ + A+ E Sbjct: 64 GFSEMINALRSEFDGTISSVSRIELLHSPAEYQTHVDFNQIRECYAQAITN-------EY 116 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA-SSPD 180 + V L + + I+ G ++ +A+ + L++ G ++ ++D + + + + Sbjct: 117 FEDLVENLLDSSKCIILGSESTASLAEYLNYHLIRYGISSDIIKDNSESIYKIYNEADEE 176 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRAS--HCLYTIAEEQATN 238 +++++S + + ++ KV +IT + + L + EE + Sbjct: 177 TVVISLSVRRYTKFQYYITERLIEKNMKVYSITDSIHSPYNSLNNKCIVLNSSTEEGFNH 236 Query: 239 SASISACHAQGMLT-DLLFIALIQQDLELAPE 269 + ++ +++ ++ + + + Sbjct: 237 L----SHSVLMLVLQEIIRKGIVNRSKDEIAK 264 >UniRef50_UPI000196AA26 hypothetical protein CATMIT_01876 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196AA26 Length = 274 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 41/279 (14%), Positives = 96/279 (34%), Gaps = 17/279 (6%) Query: 2 NGLLRIRQRYQGLAQSDKK--LADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 N R+ +++D +A ++ + +LA E VS +++ +F + LG Sbjct: 3 NLFYRLMIYLDTASETDTNYFIALFMANNFYRIPDMRISELAEECFVSPATISRFCRALG 62 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 Y+ F LK + ++ + ++ + E+ ++ + + Sbjct: 63 YENFAHLKQECNSFHSNNKKFNNLINIDLECMAHSPEKATEEFAQQIIESTKEISKILDW 122 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L E + ++ + G S A L+ + A D L + + Sbjct: 123 KILDEVLHLIHDHEEVAFFGTQFSTSAAILLQTDLLMLEKFTIAYMDSERQLECAKQMTE 182 Query: 180 DDLLLAISYTGVRREL-NLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D + + IS G + + + + ++ IT + L E + Sbjct: 183 DSVAIVISLNGNFEHVGHKVLQYLHKSKCHIVWITSTHED--------NLGIPVEYKVLV 234 Query: 239 SASI---SACHAQGMLTDLL---FIALIQQDLELAPERI 271 S+ + HA L+ + +L DL+ +++ Sbjct: 235 GGSLENKTTKHALLTAVQLMSLRYYSLFCPDLKSMKKKL 273 >UniRef50_B5G8P1 Transcriptional regulator (Fragment) n=1 Tax=Streptomyces sp. SPB74 RepID=B5G8P1_9ACTO Length = 227 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 49/192 (25%), Positives = 82/192 (42%), Gaps = 4/192 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + IR R GL+ ++ ++A +L + LS ++A A + SSVV+ Q+L ++ Sbjct: 11 DLAAHIRSRLSGLSGAEARVAHTVLDLGERLVGLSVSEVAALAETAPSSVVRTCQRLEFR 70 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+A A Q P P DP + + A+ + Sbjct: 71 GFQELKIA----AARQAPHPPGPADGFGDAADPAARALASTLAASREALDGLRTTLPPAR 126 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L E +L A R+++ G G S V + A++L +G A D + + Sbjct: 127 LGEAARLLHGASRVLVVGAGLSRPVVADTAYRLRAVGRVVDAPADPLTAQLSAGLLTDTS 186 Query: 182 LLLAISYTGVRR 193 + LA+S+TG R Sbjct: 187 VCLAVSHTGATR 198 >UniRef50_Q11LZ5 Transcriptional regulator, RpiR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11LZ5_MESSB Length = 300 Score = 133 bits (337), Expect = 4e-30, Method: Composition-based stats. Identities = 53/278 (19%), Positives = 111/278 (39%), Gaps = 7/278 (2%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I + L + A Y+L P LS ++ A AGV ++ + A++ G G+ A+ Sbjct: 10 ITRSIGTLPGQLEVAARYVLENPGDVALLSMREQARRAGVQPWTMTRLAKRFGLDGYEAV 69 Query: 67 KLALSEALASQPESPSVPIHNQI--RGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 + +AL Q + Q+ + + ++ +++ ++A + L E Sbjct: 70 RELHGKALKEQALGFAGRAGAQMARQREAGGPMLAKEIASAAACQIFALGEAGAAHTLFE 129 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHAL-LATVQASSPDDLL 183 + ARR+ G+ +S VA++ A+ L +G A + + L ++ ++ DDL+ Sbjct: 130 AAQAMARARRVYCVGLRSSRPVAEHLAYMLNFLGEKAVYLDFSDGVGLDALRFATQDDLV 189 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 ++ R AA ++A+T + + + A H + E + Sbjct: 190 FVVTVAPYTRAAVEAARHAHARSLSIIALTDRPASPVARLARHAILVGTESPSF----FH 245 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 A ++L + + + A E I +E + L Sbjct: 246 AMAPAFAAVEILAALVAGEGGDAALEVIARTERQLSDL 283 >UniRef50_C2DZ33 Transcriptional regulator n=9 Tax=Lactobacillus jensenii RepID=C2DZ33_9LACO Length = 262 Score = 133 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 52/268 (19%), Positives = 99/268 (36%), Gaps = 26/268 (9%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN RI ++ L+ S+K++ LL LS + L+ + VS+S++ + +KLG Sbjct: 6 MNLQTRIYEKQGDLSGSEKEIIQGLLSSAKENSQLSLKDLSKKLYVSESAIFRLCKKLGL 65 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ LK LS + + + + + L + + + T + Sbjct: 66 SGYSELKFELSAVSSIKNHPNNNFV------KEMADLTTNTIKQFEARNL--TNFYIDVQ 117 Query: 121 KLHECVTMLRSARRIILTGIGASG-LVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASS 178 A+ I L G L+A + +L G + L Q + Sbjct: 118 T----------AKTIYLYSTGWQQELLASYISKELFLFGKQTVLLPSALDELKMRGQFFN 167 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVG--GKVLAITGFTPNALQQRASHCLYTIAEEQA 236 D+L ISY+G + ++ VG K++++T N L + + + + + Sbjct: 168 KGDMLWTISYSGNNSSIVNELKKISLVGDKIKLVSLTKMGSNDLATISDYSFFFQTIDFS 227 Query: 237 TN---SASISACHAQGML-TDLLFIALI 260 S +C + + DLL Sbjct: 228 YKNNGGGSPRSCFSPAYILIDLLMNGYF 255 >UniRef50_B8DD88 Phosphosugar-binding protein n=16 Tax=Listeria monocytogenes RepID=B8DD88_LISMH Length = 250 Score = 133 bits (336), Expect = 6e-30, Method: Composition-based stats. Identities = 45/246 (18%), Positives = 88/246 (35%), Gaps = 19/246 (7%) Query: 10 RYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLA 69 + + L+ ++K++ Y+ T +S LA VS ++V++ KL GF LK Sbjct: 13 QIEFLSPAEKQVFFYIDNHISTIEKMSLTSLAESTNVSTTTVIRMCHKLKLSGFSELKFL 72 Query: 70 LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTML 129 L D EK+ + ++++ + T + Sbjct: 73 LHSDKTETKP----------LSKDYSSTFLEKIRLG--------IEQLPKKEIEQVATRI 114 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYT 189 A +I + +G + + + F+ L+ N D + Q DDL++ IS + Sbjct: 115 AYAPKIYIACLGMTKTLGEYFSKSLVTSKKNVVFTYDSFIIDILPQIVERDDLIIIISES 174 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQG 249 G A+ + V+AI + Q +Y +EE + Sbjct: 175 GGTENTLSLAEHLKYNLSNVIAIVNNPNAQISQYVETIIYASSEEFGEDLFKHH-HAPLL 233 Query: 250 MLTDLL 255 ++ DL+ Sbjct: 234 IVIDLI 239 >UniRef50_C2EN35 RpiR family transcriptional regulator n=1 Tax=Lactobacillus ultunensis DSM 16047 RepID=C2EN35_9LACO Length = 256 Score = 133 bits (335), Expect = 7e-30, Method: Composition-based stats. Identities = 46/269 (17%), Positives = 93/269 (34%), Gaps = 21/269 (7%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + ++ + L ++ + Y+ DT + +LA E S S + K +K+GY Sbjct: 5 SFDEKVVKTKNKLTTNELTVLQYIHKNADTINRKTISELAKETHFSSSFISKLVKKIGYD 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F A++L L L + ES ++K + T ++ + Sbjct: 65 SFAAMRLDLKNDLVKKIESNEYG-----------------VLKNQNIDIAKTNSLLLQMN 107 Query: 122 LHECVTMLRSARRIILTGIGASG-LVAQNFAWKLM-KIGFNAAAVRDMHALLATVQASSP 179 + +A I + G G S + + LM + + + + + Sbjct: 108 FKPINKLFDTATAIYVYGTGHSQNNYMRELSRNLMALVNVPVIFLSGQSEFQSVIYTAKS 167 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE--EQAT 237 + S TG L A + +++ T F+ N L A++ L+ + T Sbjct: 168 TSCFIIASTTGKTPVLIDAVKILNLSQVPIISFTSFSDNELSDLATYNLFYYLTPIKNPT 227 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLEL 266 N +I + G + D + I + Sbjct: 228 NHRNIRSYLPLGYVVDFVIREYISHLQKK 256 >UniRef50_C4FYW5 Putative uncharacterized protein n=2 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FYW5_ABIDE Length = 286 Score = 133 bits (335), Expect = 8e-30, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 107/268 (39%), Gaps = 12/268 (4%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I + ++ + Q +K + ++ + AR SS+ ++ VS++S+ +FA+K GYKG+ Sbjct: 27 IEKNFEDMTQLEKSIGEFFIKNKS-ARDFSSKGISGLLYVSEASLHRFAKKCGYKGYREF 85 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 + + + ++ + + + + KL T + + + ++ + Sbjct: 86 IFSYEKDIENERNNG--------TDEKKVNQLIIKLKAAYTTLVEENFGLIKDNQIRKIA 137 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 T+L S +R+ILTG V + + K +K+G + V L +V + D L++ Sbjct: 138 TLLNSGKRVILTGSETENAVFEEYKLKYLKLGIDINTVTKKEFLEPSVDLLNKDSLVIVC 197 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 +G L + ++ IT + + + N S+ Sbjct: 198 DISGENDNLKTVVQKAEVKEADIVLITANEACEYADLCNEVIKVSYPKGLANVISM--QM 255 Query: 247 AQGMLTDLLF-IALIQQDLELAPERIRH 273 M D+++ ++ A ++ + Sbjct: 256 VILMTMDVIYSYCSANKNYFKAIKKEKE 283 >UniRef50_UPI000050FE27 transcriptional regulator, RpiR family protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FE27 Length = 285 Score = 133 bits (335), Expect = 9e-30, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 97/267 (36%), Gaps = 12/267 (4%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L ++ K + + P+ A + S+Q LA+ A V+ ++VV+ AQ LGY G+PA + Sbjct: 21 RLTRATKTILGVIKTDPEEAAYCSAQALADIAEVNVATVVRAAQSLGYSGWPAFSAEIRT 80 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 + S+ +HN+ + + I ++ + + E L+ + ++ Sbjct: 81 RYLASLSPRSLYLHNR------SQGLLATTIDKDIELLERMRDGLDESTLNRMSEHIIAS 134 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASSPDDLLLAISYTGV 191 + G+ + +G+ +++ V + D LAI+ Sbjct: 135 ESTGVFATGSYAAPGMQLSHVAQMLGYRVRLHSGSVTSMVNEVNLLTSHDCFLAITLWKS 194 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGML 251 R + A+ G KVL I AL A + AE IS+ Sbjct: 195 SRAVVQLAEVAREQGAKVLVI-ADRRTALTDIADEYVLVPAESSEL----ISSLVCATSA 249 Query: 252 TDLLFIALIQQDLELAPERIRHSEALV 278 L L + D E + + L Sbjct: 250 VQYLLGCLARHDEERTQSMLGRIDDLW 276 >UniRef50_D1AGI8 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AGI8_SEBTE Length = 243 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 46/267 (17%), Positives = 95/267 (35%), Gaps = 27/267 (10%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + L +DK + DY+ DT + +A + S SS+++ ++KLGY Sbjct: 1 MNIERTFKGI--KLTSNDKIILDYITKNIDTCLEEGVRGVAKNSFSSTSSIMRLSKKLGY 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF L L + + ++ +K+ T N ++ Sbjct: 59 SGFVELIYDLKKKMTAKKSEKINI------------SFFDKI----------TFNTRNKS 96 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ + + + +I+ G G S + + KL+ +G + + + +++ Sbjct: 97 EIDQFLKRIHR-GKIMTYGEGFSEIASSYMYRKLLTLGKIVYLLHGIDFDILCEKSAMKF 155 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DLLL +S +G + A + V + TG + L + + + Sbjct: 156 DLLLIVSKSGETKHCIKLAKQAKEENITVCSFTGNAASHLAKLSDISFTYNDPHTLDDDV 215 Query: 241 SISACHAQGMLTDLLFIALIQQDLELA 267 + F LI++ E Sbjct: 216 YYPNPFIGLCIIG--FEELIRRYFEKY 240 >UniRef50_A0K0Z5 Transcriptional regulator, RpiR family n=3 Tax=Micrococcineae RepID=A0K0Z5_ARTS2 Length = 299 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 54/269 (20%), Positives = 104/269 (38%), Gaps = 10/269 (3%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 L+++ ++ D + P + + ++A A V+ S+VV+ AQ LGY+G+P L+ L Sbjct: 35 LSKAQSRVVDVIARNPQLSSYADIAEIAQRADVNNSTVVRTAQHLGYRGWPDLQRELRSR 94 Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR 133 + + R I + + TL+ N+ + + + +A+ Sbjct: 95 YLVMISTEDT-----LTEHGEHRSPLHDAINHDIENLRLTLDSNTGDDAEAAIAAMAAAK 149 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA-SSPDDLLLAISYTGVR 192 I G+G+ A A +G+ LA+ D+L+ I+ Sbjct: 150 SITAVGLGSFAGPASVMAHLGSTMGYPITLENRAGVHLASSTNTLGEGDVLVVINMWRSI 209 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLT 252 R++ + A+ + G V+AI+ L A H L +E + + A + Sbjct: 210 RQIIVTAEAAKQAGATVIAISDMRRGRLAAAADHLLVVASEGISF----FQSVTAANSVV 265 Query: 253 DLLFIALIQQDLELAPERIRHSEALVKKL 281 L + E + IR ++ L K L Sbjct: 266 YGLLAGMEAAHPERSRAAIRRTQQLWKDL 294 >UniRef50_Q8EWN1 Transcriptional regulator n=1 Tax=Mycoplasma penetrans RepID=Q8EWN1_MYCPE Length = 281 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 59/271 (21%), Positives = 119/271 (43%), Gaps = 9/271 (3%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 ++YQ L + +K L + P + ++ S+SS+ + +QK+G+K +KL Sbjct: 11 EKYQNLNEIEKDLLKKINENPIQFLDNNIIDISKSFYSSKSSISRLSQKIGFKHLSDMKL 70 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 +S LA Q ++N + + L N A+ TL+ + + Sbjct: 71 YISGKLAMQ------DLYNLDKEESNTESRIRNLRTYNIFAINETLSNINISDIKNICAN 124 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + +R++I G+G+S L AQ + ++K+G N+ ++ D+H LL + ++ DLL+ S Sbjct: 125 IIKSRKVICYGLGSSFLAAQELSQNMLKLGINSISINDIHNLLLALSSADKSDLLVLFSK 184 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 +G +E++ + + VL IT + R + + + + S+ Sbjct: 185 SGTNKEISYSIKVCNELNIDVLLITCNK--EVANRVKYKIIMEDIWKDKRLIATSSKTCM 242 Query: 249 GMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++DLL+ L E A + + L+ Sbjct: 243 LAISDLLYYELYY-MTETADRNLEKANNLLN 272 >UniRef50_C1I6H5 Predicted protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I6H5_9CLOT Length = 253 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 106/261 (40%), Gaps = 10/261 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + I QS+ K+ + +L PD A + VS+S++++F QK GY Sbjct: 1 MNPIDNILLHNDEFTQSEIKIKNIILTNPDIIACFPLVTAAYKMNVSKSALLRFCQKCGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGF K LS L S S I++ +++I + N + Sbjct: 61 KGFSEFKYELSRYLHSGNLSNEKIINDS----------SQEIINLFIEKLTLLKESNLDN 110 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L + + +I + G+ +GL A++ ++L IG ++ ++ D + SS + Sbjct: 111 QLEALSEDILKSNKIKIYGVHETGLAARHLQYRLTTIGIDSESITDSSLIAEKALFSSQN 170 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL + S + + + + + + IT ++ + ++ + A +S Sbjct: 171 DLNIYFSLSALTSIIVESIKNSISNNSNIALITQNNKTKFSKQIPNIIFLPSFSLAKDSF 230 Query: 241 SISACHAQGMLTDLLFIALIQ 261 I + + +LL L + Sbjct: 231 FIDSQALNFVFIELLINKLSK 251 >UniRef50_Q14NM0 Hypothetical transmembrane protein n=1 Tax=Spiroplasma citri RepID=Q14NM0_SPICI Length = 280 Score = 131 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 48/285 (16%), Positives = 111/285 (38%), Gaps = 17/285 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + + L +L + L + L+ +LA+ ++ S++ + +KLG+ Sbjct: 1 MKIITY--DKENQLTDLQIQLIEKLNNDIQSVLELTINELADNLFINTSTLSRLIKKLGF 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + + K+ ++ + + + L + + + K NT A+ T Sbjct: 59 ENYSKFKVWVAGKYNNIKKFDIQ------ENETTLHNIIDNIYKLNTYALDETYRNLKVN 112 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L + + + + RI++ GI L+ +N L + +N+ + + +A + ++ S + Sbjct: 113 QLEKIIDTIHDSERIVIWGISRHTLICENLNLHLNVLKYNSTYLVNYYATIQLIETLSEN 172 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNA----LQQRASHCLYTIAEEQA 236 DLL+ IS + E + D + K++ +T LQ+ L E Sbjct: 173 DLLILISKSLQDAEYHFLIDIATKRNVKIILLTINKEYKGPPNLQK-----LTLENTEIL 227 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++ ML +++F LI + E + + + Sbjct: 228 NFYVDNPHYVSRLMLINIVFGMLIAKYHPTHNEEYKDYYTAIDEW 272 >UniRef50_A3PQG1 Transcriptional regulator, RpiR family n=6 Tax=Rhodobacteraceae RepID=A3PQG1_RHOS1 Length = 286 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 103/255 (40%), Gaps = 15/255 (5%) Query: 22 ADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESP 81 A +LL S++ LA AG + ++V + A+++G+ G+ + + A+ E + + Sbjct: 26 AVWLLDNLSAVAFNSTRSLAALAGTNPNTVTRLAREIGFDGYDSFRSAVQEVVQRRNIRY 85 Query: 82 SVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIG 141 + + + N + + + L CV L +ARR+ G+ Sbjct: 86 GERAEA--LRHRSEADIWGEALTANLGNIETLFSAEGMDLLESCVEPLLAARRVHTIGVR 143 Query: 142 ASGLVAQNFAWKLMKIGFNAAA-----VRDMHALLATVQASSPDDLLLAISYTGVRRELN 196 + +A F++ +G A A A+L V +++P+D+++AI+Y E+ Sbjct: 144 SCFGLAHYFSY----VGGRAFANFIEVPVTPGAILDQVASATPEDIVVAITYEHYSAEVV 199 Query: 197 LAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLF 256 A G ++LA+T + + A + + + A + +LL Sbjct: 200 RACHVARSCGARILALTDSHSAPVAEGAWKVVRLPMAGPQI----LPSLTAAYIALELLL 255 Query: 257 IALIQQDLELAPERI 271 A+ + + A + Sbjct: 256 SAMAARSPDAAARLL 270 >UniRef50_B2JHA3 Transcriptional regulator, RpiR family n=5 Tax=Burkholderiaceae RepID=B2JHA3_BURP8 Length = 335 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 92/271 (33%), Gaps = 18/271 (6%) Query: 25 LLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVP 84 LL QP+ + LA V+ S++ + KLGY GF + ++LA + Sbjct: 64 LLEQPEEVAVRTITDLATALDVNASTLTRLCTKLGYAGFADFQSVFRDSLAHRHRHFYTH 123 Query: 85 IHNQIRGD-------------DPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 ++ P V +L E+ + L S + L +L Sbjct: 124 QAQRLVAGKAARMQMSGRGGASPEIDVVAQLAHESIGNVETFLGRLSPDDLRGAAALLAD 183 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSPDDLLLAISYTG 190 A R+ + + +A + L I + A + + + P D+++ S Sbjct: 184 APRVRVHALRQFSSLASFLCYGLGMIRTDVALLDAQGLGVAEGLAQLQPGDVVVVSSVAP 243 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGM 250 R + A G V+AIT + L A H E ++ + A + Sbjct: 244 YTRSVAETAAAAAEAGMTVIAITDTLASPLVPPARHAFLIPHESSFFSN----SMGAYLI 299 Query: 251 LTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + L + + + + + E L+ L Sbjct: 300 FCEGLLNLVATHLGKRSLQALSRRERLITAL 330 >UniRef50_Q12C10 Transcriptional regulator, RpiR family n=2 Tax=Comamonadaceae RepID=Q12C10_POLSJ Length = 301 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 48/229 (20%), Positives = 96/229 (41%), Gaps = 4/229 (1%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 GL+ + A ++ P S ++ A AG++ +++ + +Q LG+ GF A+K Sbjct: 12 LDGLSPELLRAARWIEAHPREVALHSMRECARRAGLAPATLTRLSQALGFNGFDAIKNLC 71 Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE-KLHECVTML 129 E+ A+Q Q + ++ E A A++ ++ +L + Sbjct: 72 QESFAAQAGYAGRAEVLQASARHSKDWLA--VLNETQHANTASIGGLNQRGQLEAAADAM 129 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLA-TVQASSPDDLLLAISY 188 ARRI G+ AS +A + + + N V+ + L+ + DLL+A+S Sbjct: 130 LKARRIYFLGLRASHGLALHLHYTYGLLASNGVLVQGLGGTLSDQIGEMGRGDLLVAMSL 189 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 R+ A + L G ++ +T + + + A+H L A+ + Sbjct: 190 APYTRQTVDAVAQALGQGVDLMVLTDSALSPIARSAAHTLLFRADSPSY 238 >UniRef50_A8U5R1 RpiR-family transcriptional regulator n=2 Tax=Bacilli RepID=A8U5R1_9LACT Length = 256 Score = 130 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 93/262 (35%), Gaps = 18/262 (6%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + ++ Q + L++ D K+ Y++ D + +A + S S++++ ++KLGY Sbjct: 1 MKDISKLIQG-KKLSELDIKVLHYIIENIDDVLDKGVRGVAKDNYTSPSTIIRLSKKLGY 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF L P +D LR+ + KEN+ + Sbjct: 60 TGFIDL------YYQLLPMVKRTVGQQTDNDEDFLRISQQDFFKENSRE--------DID 105 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + V L+ + I + G S ++A+ KL+ +G ++ Sbjct: 106 QFIRQVLYLKQ-KYIFIYATGFSAIMAEYLYKKLLVLGKKTVIATGTDSIGVFENNLEDI 164 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL-YTIAEEQATNS 239 + IS +G +++ G + T T N + A T + + Sbjct: 165 GAFIVISKSGETQQVIDKLLVAKDQGIFTITFTKETSNRAAELADLNFKLTDNNKLDDRN 224 Query: 240 ASISACHA-QGMLTDLLFIALI 260 ++ ML + +F + Sbjct: 225 MLPNSFFPRLLMLVEYIFKMYL 246 >UniRef50_C0D3Y2 Putative uncharacterized protein (Fragment) n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D3Y2_9CLOT Length = 159 Score = 129 bits (326), Expect = 9e-29, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 71/134 (52%), Gaps = 1/134 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L+R+ + + ++ ++ Y+L P+ A LS +L+ A S +++V+ ++LG+ Sbjct: 27 SVLVRLNEYQLQMTPAESEVVQYILHHPEKAAELSVHELSARAFSSSATIVRMCRRLGFD 86 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ L+ +L LA + +S +++ +D L + +K+ +N ++ T N+ Sbjct: 87 GYKELRRSLQYELAVRKQSEMEK-RDEVSREDSLEQMVDKITYKNIVSLEETKNLVDLPV 145 Query: 122 LHECVTMLRSARRI 135 L +CV ++ AR I Sbjct: 146 LQKCVDLMCVARNI 159 >UniRef50_A0AGT3 Complete genome n=1 Tax=Listeria welshimeri serovar 6b str. SLCC5334 RepID=A0AGT3_LISW6 Length = 213 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 74/217 (34%), Gaps = 10/217 (4%) Query: 56 QKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLN 115 +K GY+GF A K L + + +V + + ++K + TLN Sbjct: 2 KKKGYEGFTAFKHHLKDEQNTTINFSNVEKID--------TEIKSSILKNEQEVI-RTLN 52 Query: 116 VNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQ 175 + + + + + + S+ RII+ S +A+ K D + + Q Sbjct: 53 MINTGVIEDAIQKIESSERIIIFARAFSEFIAEEMKIKFQLANKYCELHTDPNIIKIMSQ 112 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 D ++ +S G EL AA + IT + L + L E Sbjct: 113 HLKKTDTVIFVSLNGETEELIDAAKNCYNKEIGTITITTNKESPLSMLSELVLVGFKSEI 172 Query: 236 ATN-SASISACHAQGMLTDLLFIALIQQDLELAPERI 271 + + + ++ +L + + + + + Sbjct: 173 SFFPDYEVRSRLPLSVIARILLDSYVIRMNKHHENKK 209 >UniRef50_C7LLS0 Transcriptional regulator, RpiR family protein n=3 Tax=Mycoplasma mycoides group RepID=C7LLS0_MYCML Length = 275 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 93/254 (36%), Gaps = 11/254 (4%) Query: 25 LLLQPDTARHLSSQQLANEAGVSQSSVVKFA-QKLGYKGFPALKLALSEALASQPESPSV 83 +L + + + ++A S +++ +F + L GF L+ L L Q E + Sbjct: 28 ILDNIELITNSTISKVAQITYTSPATITRFCQRHLDISGFSELQTLLRVYLNQQEEQNRL 87 Query: 84 PIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGAS 143 + N+ + + + A+ AT + ++ + V + + + + L S Sbjct: 88 LLQNKDKKISKFEEISK--------AINATDALIETNQVDKLVKAIYNTKTVALISYDNS 139 Query: 144 GLVA-QNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEM 202 A A K+ IG + L + S + + IS+ + ++ Sbjct: 140 VNHAVTELAEKMNLIGIPPVIINQQDLLDYYTKISDSSWVFIVISHFAENITTYQSIVQL 199 Query: 203 LRVGGKVLAITGFTPNALQQRASHCL-YTIAEEQATNSASISACHAQGMLTDLLFIALIQ 261 + G ++ I+ PN + + Y + + SA + + +LF ++ Sbjct: 200 KKNGSRIGLISMNKPNKYSSVCDYWIKYAVTDADPLQKIKHSANFSLLYVVQVLFNRILT 259 Query: 262 QDLELAPERIRHSE 275 +D + + I+ + Sbjct: 260 KDHDRFEKIIKTLK 273 >UniRef50_A6W9S6 Transcriptional regulator, RpiR family n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W9S6_KINRD Length = 285 Score = 128 bits (324), Expect = 1e-28, Method: Composition-based stats. Identities = 44/284 (15%), Positives = 100/284 (35%), Gaps = 16/284 (5%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 R+ + L +++++A ++L + D S +LA +G S+++V +F ++LG+ Sbjct: 11 GVRERVDAAWPRLTPAERQVARFVLERADDLAGYSGAELAEASGASKATVSRFFRRLGFT 70 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + + SP D + + + T + + Sbjct: 71 SYAQ--------ARTGARSPRARGVPTGGLPDSGGEPVAVHLAHDVENLTRTASALAAAD 122 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL-ATVQASSPD 180 L T L ARR+++ G S VA + +L++ + A + + Sbjct: 123 LDAVTTALARARRVLVLGWRNSYPVALHLREQLVQARPDVAVGPLPGQTVAEELAGLDER 182 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L+ + + ++ A +G + +T +H L E Sbjct: 183 DVLVVVGFRRRTPTVSAAVRLAADLGVPCVLLTDPAAAPPPVPVAHRLVVPVEGP----G 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIR---HSEALVKKL 281 + + A M +L ++ +R R + +++L Sbjct: 239 AFDSYAAVMMTVAVLAEGVLASRSGPGQDRTRAVAAAHDALREL 282 >UniRef50_UPI000196CB04 hypothetical protein CATMIT_02765 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196CB04 Length = 230 Score = 128 bits (324), Expect = 1e-28, Method: Composition-based stats. Identities = 34/251 (13%), Positives = 91/251 (36%), Gaps = 21/251 (8%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 + L +++ + +Y++ + S ++LAN VS +++++F +K+G +GF LK L Sbjct: 1 MESLNETEAYVYNYVVKNTKKVLNASIRELANYTHVSTATIMRFCKKMGCEGFTELKYRL 60 Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 E + +Q + + + + + + + E +H +++ Sbjct: 61 KEHVEAQETKE------------------DDVSDQFASFIERVKSSDYLESIHRSAAIIK 102 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 + I+ GIG + A+ + L +G+ V + V +++A Sbjct: 103 QSDSILTLGIGINSDFAKYTSRLLSHVGYYCYGVDGAAYPVQRVAEGHQG-VIIAFYEQR 161 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGM 250 ++ L ++ ++ +++ ++ I + Sbjct: 162 QKKLLFEEIYRYKNKNYIIIMLSNNNMGSMEHLCDEVIHISDGNVML--GKIYSGVPMLY 219 Query: 251 LTDLLFIALIQ 261 + L L + Sbjct: 220 AIEKLAYELTK 230 >UniRef50_Q930C4 Transcriptional regulator, RpiR family n=1 Tax=Sinorhizobium meliloti RepID=Q930C4_RHIME Length = 280 Score = 128 bits (324), Expect = 1e-28, Method: Composition-based stats. Identities = 48/282 (17%), Positives = 111/282 (39%), Gaps = 6/282 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M R++ L ++++L ++ +P ++ +LA GV +++ + A+KLG+ Sbjct: 1 MLIAERVQTIADTLTPAERRLVKEIIAKPRDVALGTAGELARRTGVHEATASRLARKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + + + A+ + + + + E L+++ A+ + EE Sbjct: 61 ETYAGFRHAIRDEFIVKTDPALRVRRTLETSRG--HGMLEMLVQQEIEALTRLSSYVDEE 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF-NAAAVRDMHALLATVQASSP 179 +L L RRI + G + +A +L ++ F D + + + P Sbjct: 119 RLAAAAAALSDRRRIFIFARGNAETLAVLMNRRLRRMAFETVLVCGDSRDIAEQILSMGP 178 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD LL ++ R + +VG + ++G +L +A H L +A ++ Sbjct: 179 DDALLVFAFRRQPRAYAPLIERAGKVGAVSVVVSGTVGPSLSPKADHLLAAP---RAGDA 235 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + + L +++ Q D + + L+ +L Sbjct: 236 DAFQTLTVPMAICNGLILSMAQSDEVRSLSNLEQLGELIGEL 277 >UniRef50_A8LRZ7 Transcriptional regulator n=2 Tax=Rhodobacterales RepID=A8LRZ7_DINSH Length = 281 Score = 128 bits (324), Expect = 1e-28, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 89/254 (35%), Gaps = 11/254 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L R+ L S++KLA+ +L P ++ ++A A VS ++V +F +++GY Sbjct: 9 FLARVSDALPDLHPSERKLAELVLDFPGEMAGYTATEIAELANVSNATVSRFVRRIGYGS 68 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F + A+ + ++ + + V L+ + T + + Sbjct: 69 FDEARRAVRDE----QQAGTALLRMSADTPQSGGAVARHLMAS-QQNLELTYGGLDDTVI 123 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSPDD 181 + +A R+ G A AQ W+ ++ + L + + D Sbjct: 124 DYLAEAMIAAPRVWFVGFRAGQSFAQYLGWQCSQVLPLVTVLPRAGETLAESFASLDARD 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++ ++ + A+ + G + + L A L + A Sbjct: 184 VVFLVALRRKPKLTQAVAEATKQAGAALAVLADGPTPDLAG-ADWHLTSATSTTAPLMNH 242 Query: 242 ISACHAQGMLTDLL 255 +S+ + +L+ Sbjct: 243 VSS----MAVCNLI 252 >UniRef50_C2K0T0 Possible transcriptional regulator n=2 Tax=Lactobacillus rhamnosus RepID=C2K0T0_LACRH Length = 280 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 101/253 (39%), Gaps = 20/253 (7%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 RI+Q L ++ +L L Q + +LA S S++ + +KLG+KG+ Sbjct: 36 SRIQQAKVTLTHNETELLRSLSAQAGVIPRATITELAQSVFSSPSTIHRLIRKLGFKGYT 95 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 K+ + ++L S+ + L+K +++ T ++ + + Sbjct: 96 DFKVRVEDSLESELPLVLAQPN---------------LLKITISSIEHTFR-LNQGVIRD 139 Query: 125 CVTMLRSARRIILTGIGASGLVAQN-FAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 + +A R + G G A + F+ L+ G ++ +R+ + L V+ + +L Sbjct: 140 AARLFLAAERHYVYGTGWRQKQAVDNFSTDLLVYGESSITLRNKYDLGNAVKQMNEHSVL 199 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA--- 240 L S +G E + ++++T N L + + +Y + ++ Sbjct: 200 LFTSLSGNTDEYAATLQQAKLQKVSIISVTRDVSNPLSEISDVAIYFADDTNLQDNRHWP 259 Query: 241 SISACHAQGMLTD 253 +I+ + ML + Sbjct: 260 AITMSFSLEMLIN 272 >UniRef50_A1RA62 Putative SIS (Sugar ISomerase) domain protein n=1 Tax=Arthrobacter aurescens TC1 RepID=A1RA62_ARTAT Length = 265 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 94/256 (36%), Gaps = 9/256 (3%) Query: 27 LQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIH 86 QP A + S +A A + S+V + AQ LG+KG+ + L + + V Sbjct: 9 SQPRLASYGSVSDIAAVAASNASTVTRTAQTLGFKGWADFQFELRSRFLASLSAVEVAAE 68 Query: 87 NQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLV 146 + + + + + + A + E LH + AR+ + G+ + Sbjct: 69 H----NGHVSSPAQAAVSTDRANLAHFERTLDAETLHNIAKAIAGARQTFIVAAGSYAIP 124 Query: 147 AQNFAWKLMKIGFNAAAVR-DMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRV 205 + + G+N + D+ AL + +DL++AIS V A + + Sbjct: 125 GKALEHNAIIAGYNVRLLDADVAALTNAIARLGAEDLVIAISLWRVYDSTMRAVEIAHNL 184 Query: 206 GGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLE 265 G +++IT + + A H + E + + + + L D E Sbjct: 185 GTPIVSITDSAGSPVAVHADHRIVVPTE----GAGFFPSLTGAVAAVQAIAVELASLDRE 240 Query: 266 LAPERIRHSEALVKKL 281 + + I SE ++ Sbjct: 241 RSNQNIAASERTWDQM 256 >UniRef50_A7MI97 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=A7MI97_ENTS8 Length = 247 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 48/245 (19%), Positives = 94/245 (38%), Gaps = 39/245 (15%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 L+++++ + +Y+L +S++ +A++ + +SV + +K+GY G+ L+ Sbjct: 29 MNNLSRTERIVYEYILCNIHRLSGISAKMIASQTFTTTTSVNRVCKKMGYSGYTELRYKC 88 Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 L ++P + Q E+ + E L Sbjct: 89 GFPLQTKPHVSDKMSNGQ------------------------------EKDIAELCQQLH 118 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 A+ I L G + + L G + D+H + + LLL S +G Sbjct: 119 QAQHIYLYARGGTLTSLSYLSRFLSIAGIPHLMLTDVH----QLALINKGTLLLV-SKSG 173 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGM 250 + + A R +V+AIT ++L Q AS T A E A ++S+ +Q Sbjct: 174 ETKAIVEMARNAKRKNIRVMAITRN-NSSLSQVAS---RTWAVEDADEASSLYQRESQIK 229 Query: 251 LTDLL 255 + D + Sbjct: 230 ILDFI 234 >UniRef50_D0ALV4 Transcriptional regulator (Fragment) n=2 Tax=Enterococcus faecium RepID=D0ALV4_ENTFC Length = 192 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 76/180 (42%), Gaps = 9/180 (5%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 L+++++ L +++ + S +L+ +A VS +++V+ +K GY+GF + K L Sbjct: 3 HKLSETEQYLWNFIEHLILEIPNYSIVKLSEQANVSTATIVRTMKKKGYEGFTSFKHHLK 62 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 E + D + + I +N + T+N+ + + + ++ Sbjct: 63 E---------GENKNINFSFLDKVDKGIRRAILKNEQEVVRTINMLEIGNIEDAIQRIKF 113 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGV 191 A R+ + G S ++ Q KL G N D + + + + D ++ +S G Sbjct: 114 ADRVFVFARGFSEMIGQEMLVKLQLTGKNCQMHTDPEIIKSISRKLTKKDSVIFVSLNGE 173 >UniRef50_Q2ST84 Phosphosugar-binding transcriptional regulator, RpiR family, putative n=3 Tax=Mycoplasma mycoides group RepID=Q2ST84_MYCCT Length = 265 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 105/268 (39%), Gaps = 9/268 (3%) Query: 2 NGLLRIRQRYQ-GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 + L +IR Q Q K + +LL R L+ +++ E S + + +FA+KL Sbjct: 4 DLLTKIRDLIQTDCNQDYKNIGAFLLKNYSNIRSLTITKISKECNTSPTQITRFAEKLNL 63 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGF LK L S+ D + + ++ Sbjct: 64 KGFSELKYRL--DDISKSIIIDNQFIPISSRIDDKTKFYKDYFEILNNSIKQQEANLKNL 121 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++E ++ A ++ L S +++NF +L +A + D ++ + P+ Sbjct: 122 PINEVANLISKANKVYLFAFNLSYNISKNFIQRLRWYQKDAISESDYISIKTYINIIKPE 181 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++ I+ +G + A+ + K++ I G +++ LY +E Sbjct: 182 DLVILITISGENEYIKNIAESL-NRKVKIVGI-GPKQSSMINLFDKYLYFQTDESEL--W 237 Query: 241 SISACHAQGML--TDLLFIALIQQDLEL 266 SI++ AQ + D +++ ++ + Sbjct: 238 SINSIKAQLTVQLLDFVYVKWLKSTKKK 265 >UniRef50_A6M3E6 Transcriptional regulator, RpiR family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M3E6_CLOB8 Length = 252 Score = 127 bits (321), Expect = 3e-28, Method: Composition-based stats. Identities = 42/273 (15%), Positives = 103/273 (37%), Gaps = 26/273 (9%) Query: 1 MNG-LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M L +I + + ++++ +Y++ D+ L + +A E S S++++ ++KLG Sbjct: 1 MKVDLSKIVNN-KKITPIEEQVLEYIINNIDSVMDLGVRGVAAENYTSTSTIMRLSKKLG 59 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 + GF + + +P + ++ L+G + + E Sbjct: 60 FTGFIDMIYNI---------TPLIDGGGTGIIEESEALIGTDIKFLSKYT--------DE 102 Query: 120 EKLHECVTMLRS--ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 E + + +L S + I + G S + + F KL+ +G + + + ++ Sbjct: 103 ENVKRFIEILASGTKKYIFIYARGYSEITGEYFNKKLLGVGIKSILIDSKGSFENNLEDM 162 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 L+ IS +G +E+ + V++ T N++ + + Sbjct: 163 ET---LIVISKSGETKEVLDKVQVAKKKNKVVISFTKEVENSISALSDISFKIFDMHKLD 219 Query: 238 NSASI-SACHA-QGMLTDLLFIALIQQDLELAP 268 +S + ++ A M + L Q+ + Sbjct: 220 DSNVLPNSFFANMLMFMEYLIYRYYQETRKENK 252 >UniRef50_A6VSF8 Transcriptional regulator, RpiR family n=4 Tax=Gammaproteobacteria RepID=A6VSF8_MARMS Length = 272 Score = 127 bits (321), Expect = 3e-28, Method: Composition-based stats. Identities = 50/281 (17%), Positives = 100/281 (35%), Gaps = 20/281 (7%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L I Q Y L+ S + +A+YL P +S ++A S+++V +F ++LGY Sbjct: 6 DVLSLIEQTYPTLSPSARSIANYLQQNPLAIVSQTSAEIAENTNTSKATVSRFFRQLGYD 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + + L ++L + T E Sbjct: 66 S--------QQGAKQAQLALRESGVPIFIQGSSLDQTAQEL-----KNLSLTFEGLRPEN 112 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL-ATVQASSPD 180 L++ L A R+ L G + +A +F +L ++ + + L + D Sbjct: 113 LNDISERLAKASRVTLIGFRNAYPLALHFRQQLQQVRHSVRLLPQPGQTLGEDLHDILDD 172 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 ++++ + + R+ + + G + IT T Q+ SH L N + Sbjct: 173 EVIVLLGFRRRTRQFKKIVEAL--EGRTTVLITDPTGQVYNQQVSHVLVC----HLGNES 226 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + A L +L + + A + + AL + L Sbjct: 227 PFDSYAAPMSLISMLCNRVFGFLGDAASRQTQAISALYEDL 267 >UniRef50_A4FJ87 Transcriptional regulator, RpiR family n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FJ87_SACEN Length = 276 Score = 127 bits (320), Expect = 4e-28, Method: Composition-based stats. Identities = 57/270 (21%), Positives = 98/270 (36%), Gaps = 21/270 (7%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 L + +++A YLL DTA +L+S +LA A VSQ SV +F LG+ G+ + L Sbjct: 12 HRLTPAQRRIAAYLLANVDTAAYLTSVELAEAAAVSQPSVTRFVALLGFDGYGHFRRYLR 71 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN-SEEKLHECVTMLR 130 +A D + I E+ + + L T+L Sbjct: 72 QA-----------GSEPAADQDARGSKLQSGIDEDMRNLARLRTELADDSALRTAGTVLA 120 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAV----RDMHALLATVQASSPDDLLLAI 186 S+ +++ G S +A F + KI + + + L + D + Sbjct: 121 SSNPLVVLGFRVSAPLASLFGYLAAKIHPDVRLLISGGSIVGDQLRHARQCGA-DATIVF 179 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 + RE A + +G + + +T T +AL A L E+ + Sbjct: 180 AMPRYPRETQRAMVQARDLGLRTVLVTDRTVSALTPDADDVLAAAVGEELV----FDSHA 235 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEA 276 A L+ L A+ A R+ + E Sbjct: 236 AVMSLSTSLLEAMADAAGASARRRLENFEQ 265 >UniRef50_B6GDB9 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GDB9_9ACTN Length = 253 Score = 127 bits (320), Expect = 4e-28, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 88/245 (35%), Gaps = 12/245 (4%) Query: 18 DKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQ 77 + LA Y L + + L+ +A E S+S + +F Q +G+ F ALK S Sbjct: 17 ENTLAKYFLDHFENLKELNVYDVAEECYTSRSGIRRFCQSIGFDNFSALK--------SC 68 Query: 78 PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIIL 137 I D L + M +EE L ++ A ++L Sbjct: 69 EWEWETHRKFFIGYTDHPA-FKGHLSNQIERMMIDVNEQVTEEDLDSLAQLIHDAENVVL 127 Query: 138 TGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNL 197 S + + F ++ + + D ++ + P DL++ IS +G Sbjct: 128 LASDFSSMAVREFQQSMLFMHKIPQILTDSFGSENSLASLGPSDLVIVISASGNYARAAR 187 Query: 198 AADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFI 257 + + +VL +T LQ+ L+ + + ++ A + L DL++ Sbjct: 188 S-ELARSAACRVL-VTTNHDCELQEFFDAVLHL-SPDGHYGERTVYAKYGINYLFDLIYN 244 Query: 258 ALIQQ 262 ++ Sbjct: 245 RYFEK 249 >UniRef50_C4XDS0 Putative uncharacterized protein n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XDS0_MYCFE Length = 267 Score = 127 bits (320), Expect = 4e-28, Method: Composition-based stats. Identities = 48/238 (20%), Positives = 100/238 (42%), Gaps = 5/238 (2%) Query: 21 LADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPES 80 L ++ P S Q+ + VSQSS+ +F + LG++ + L++ ++ + + Sbjct: 23 LIKWIEENPHEFLACSQHQITEKIYVSQSSLSRFTKFLGFESYRELQIYVARKVEQFLPN 82 Query: 81 PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGI 140 + I D + K+ ++ A N ++ + V L +++I+ GI Sbjct: 83 ETYKIDEIKDAKDCIL----KVFQQYQNISKAGFNTIETIQIEKLVNNLIKYKKLIIFGI 138 Query: 141 GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL-LAISYTGVRRELNLAA 199 G SG++ A +L +IG + + +H S+ DD+ + IS + E+ AA Sbjct: 139 GTSGIIGSYLAKQLTRIGIISVCINSIHDFKDAYNESNKDDVFYIIISKSFKNHEVKEAA 198 Query: 200 DEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFI 257 + + + +T + S +Y Q + I + + ML D+++I Sbjct: 199 EILDKSNFNFQILTRNENVSYANCTSPIIYDYIPAQKNFNYDIVSKLSLFMLIDIIYI 256 >UniRef50_C9A505 Transcriptional regulator n=4 Tax=Enterococcus RepID=C9A505_ENTCA Length = 258 Score = 127 bits (320), Expect = 4e-28, Method: Composition-based stats. Identities = 45/269 (16%), Positives = 97/269 (36%), Gaps = 29/269 (10%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + I+ + L ++ ++ DYLL L +++A S +++V+ AQKLG+ Sbjct: 13 MDLNVLIKGK--KLTDNELQILDYLLANTAAIDGLPLREIAKAIYTSPATIVRLAQKLGF 70 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ L L L +Q + + + + I + A+ N + Sbjct: 71 SGYLELLYFLKNRLKNQTITEAAIDY----------QIDATSIADTIDAIKEIYGRNKD- 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + I + G SG+VA+ K++ G V + Sbjct: 120 ------------KFITIYATGFSGIVAEYLHKKMLVNGIKTLLVSASDSGGIISNNIENI 167 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +L+ IS +G +++ + G + Q A+ +E+ ++ Sbjct: 168 SMLITISKSGETQKVLEKMALANEHHIPTVLFCGNGDHRANQLATFSFEV-TDERPYDTQ 226 Query: 241 SI--SACHA-QGMLTDLLFIALIQQDLEL 266 +I ++ +L + + A + E Sbjct: 227 NIQYTSFFGKLLLLMEYIVDAFTHVEKEN 255 >UniRef50_A0QRN2 Transcriptional regulator n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0QRN2_MYCS2 Length = 305 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 55/272 (20%), Positives = 113/272 (41%), Gaps = 18/272 (6%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L+ + +++A YLL P+ A L+++ L +GVSQ+SV +FA +LG++G+P ++ L Sbjct: 42 RLSPAHRRVARYLLDHPEQAAALTAEDLGKRSGVSQASVTRFAMELGFRGYPEMRAELGN 101 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNV-NSEEKLHECVTMLRS 131 +A+Q + + + V E+ + ++ A + ++ + ++L L Sbjct: 102 QIAAQAKGV---------PNGLVANVLERTVAKDVANIEGLVSSPWAGQRLDRVGRNLAG 152 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAV---RDMHALLATVQASSPDDLLLAISY 188 ++ + + G+ S A FA+ K+ + V D +LA + +LA Sbjct: 153 SQPLPVMGLRISRPFADLFAYFGAKVHPDVRVVPAGSDGDDVLAVAAKAGATW-MLAFGL 211 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 R L + +G +V +T L L + + +C A Sbjct: 212 PRYPRALLDSIRYARSLGLRVALVTDSPLCPLAHDVDDLLAAPVNSEL----TFDSCTAP 267 Query: 249 GMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 LT L A+ + + R+ + ++ Sbjct: 268 LALTMGLLQAMTEALPDHGQARLEEFDQRAEE 299 >UniRef50_B9CKY1 Transcriptional regulator, RpiR family protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CKY1_9ACTN Length = 266 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 107/270 (39%), Gaps = 19/270 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ ++ + L ++ + + + P++ ++ A AGVSQS++ +F QK+GY Sbjct: 1 MDAFQQMSSNERKLTPTEHLIFEAITADPESFVQSTTTMAAQYAGVSQSAISRFCQKIGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F ++ L +L++ + + + +P+ + + + + +E Sbjct: 61 DTFSEFRMDLMLSLSTHTPTQTAS-----QEKNPIEYLCNMVRATDIS--------VKKE 107 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + ++I TG G S A + +L+K ++ + + +PD Sbjct: 108 VFRNLTKRIIRSGKVITTGGGLSAPPALMLSMELLKYKIPCYFAQNGQEM-IYMHVVNPD 166 Query: 181 DLLLAISYTGVRREL-NLAADEM-LRVGGKVLAITGFTPNALQQRAS--HCLYTIAEEQ- 235 DL++ S + L ++ V+ ++ + L++ A L T E+ Sbjct: 167 DLIIIFSSKNDTQRLLINIIQDLPKNRRPYVVLVSHSATHPLKKYADDFILLPTWQTERY 226 Query: 236 ATNSASISACHAQGMLTDLLFIALIQQDLE 265 +++ A + L L ++D E Sbjct: 227 PVYIEPMTSMLAFCSIVMLSISKLSKKDPE 256 >UniRef50_Q1GL90 Transcriptional regulator, RpiR family n=9 Tax=Rhodobacterales RepID=Q1GL90_SILST Length = 304 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 53/278 (19%), Positives = 94/278 (33%), Gaps = 8/278 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L I+ R + L K A Y++ P + A++AGVS +++ + A+ Y+G Sbjct: 13 LLSTIKSRIETLPPKLKTAAKYVIDSPGDFGLDPIRVSADKAGVSPNTLTRLAEVFDYEG 72 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMY-ATLNVNSEEK 121 F + AL + E+ + N + +L + + E+ Sbjct: 73 FEDFRAPFRAALVTDREADLGSEWLDQLAAGDQTSALQARAARNALNITARSLRLMTPER 132 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA--LLATVQASSP 179 V + SAR +T ++ +A F + ++ + H + P Sbjct: 133 TTAIVDAMTSARHCFVTASRSTHALAYYFHYV-GRMALPTLELVPRHMGDAADDLLDIGP 191 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D L A+++ A G V+ ++ A RA H L A+ Sbjct: 192 QDCLFAMTFAPYSTSTIRAIRMAREAGATVILLSDSDTIAPGVRADHQLTFSAQSPHHFG 251 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 +L + L LI A RI E L Sbjct: 252 C----LSGAMVLLESLLSHLIHAGGADAQARISRYETL 285 >UniRef50_B7QTT1 Transcriptional regulator, rpir family n=2 Tax=Ruegeria RepID=B7QTT1_9RHOB Length = 276 Score = 126 bits (318), Expect = 7e-28, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 91/262 (34%), Gaps = 6/262 (2%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 + R+ + L + + A + + +A AGV+ S ++F Q G+ G+ Sbjct: 18 INRLDEIIGTLPKRMDQCATFTRRNLHLVAVSTVSDMAKAAGVAPSVYMRFCQVFGFGGY 77 Query: 64 PALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 ++ E S +P+ + D + + ++ + N + + L Sbjct: 78 SDMQALFREQYTSFRPDYEERLATLRSDQDHSSGQLLADFAEAGQKSLISLGNSVANDGL 137 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + L AR + L G + V N A+ L + + L SP+D Sbjct: 138 IKVAEGLSQARIVHLIGARRAFAVVSNMAYLLENLDVPTHLHTHVGHLSNH-HLVSPEDA 196 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 +LA+++ + A G V +T L + A+ L E A Sbjct: 197 MLAVTFAPFSQTTINDARIAAERGATVFGLTDSEKCPLFEFATETLVVREHEV----AGF 252 Query: 243 SACHAQGMLTDLLFIALIQQDL 264 + +A LT L + ++ Sbjct: 253 RSLNASLTLTTALSVLTAEKRK 274 >UniRef50_C3RJ80 Predicted protein n=3 Tax=Bacteria RepID=C3RJ80_9MOLU Length = 257 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 86/229 (37%), Gaps = 12/229 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + Y S++K+ +L P + S L + S+S++++F QKLGY Sbjct: 1 MDFKKTVAIHYTEFTPSERKICARILEDPQ-IVNNSIVVLGDLCETSKSAILRFYQKLGY 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +G+ K ++ E+ + E + ++ +E + + ++ + Sbjct: 60 RGYSEFKYSVEESFKNNDEKKL-----------SNESLLSQISQEYSNTILELGALDYDH 108 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L E +++ ++ GI + A + L +VR+ L + + + D Sbjct: 109 QLKELASLIDKYPHVLSIGINNTYFAASQLEYSLYSHNRFIQSVREDIQLTYLINSINQD 168 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY 229 L + S +G E G K++ IT + L Sbjct: 169 YLCIIYSVSGSTYTYENFIKEASAKGAKIVLITIDGNSELLPLVDLAFV 217 >UniRef50_B1IED4 SIS domain protein n=10 Tax=Clostridium RepID=B1IED4_CLOBK Length = 253 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 107/267 (40%), Gaps = 25/267 (9%) Query: 1 MNG-LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M + +I +Y L++ ++ + Y++ D + + + +A E S +++V A+K+G Sbjct: 1 MKLDISKIVDKYH-LSKVEESILIYIINNIDHVKEIGVRGVAKEHYTSTTTIVNLAKKIG 59 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 Y GF + LS L + + +N K + L + + Sbjct: 60 YSGFLDMYYNLSFTLKDKRNYFNSEKNN----------------KYYGVELEELLALIED 103 Query: 120 EKLHECVTMLRSARR--IILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 + + + + +L + I G+ S +AQ F KL+ +GF + + Sbjct: 104 KDISDFIDLLIKNKNEVIYTNGLAFSYFIAQYFTRKLIVLGFRCIYSEAYESYDVNAIKA 163 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 LL+AIS +G + A++ + G K+++ TG N L + + Sbjct: 164 K---LLIAISKSGETDFIIRASESAKKNGIKIVSFTGEAENTLAKMSDINFKIYDMHTID 220 Query: 238 NSASIS-ACHA-QGMLTDLLFIALIQQ 262 + +S + + ML + L +++ Sbjct: 221 DRNKLSNSFYPNALMLFEFLIGKYLER 247 >UniRef50_Q1AYI2 Transcriptional regulator, RpiR family n=17 Tax=Actinobacteria (class) RepID=Q1AYI2_RUBXD Length = 295 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 56/274 (20%), Positives = 100/274 (36%), Gaps = 17/274 (6%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 L+ + ++LA Y++ PD A LSS +LA GVSQ SV + A +GY G+ L+ L Sbjct: 29 SRLSPTQRRLARYVMDHPDEALFLSSVELARRVGVSQPSVTRLAVAMGYGGYGELQRELR 88 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 + + EN A+ +L + E L + Sbjct: 89 AVALEGGGGGAGSEAPNKFQGAVRAEI------ENLRALERSLE--DTGAVEELGRELAA 140 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH----ALLATVQASSPDDLLLAIS 187 + + + G+ S +A F + KI + + + LA +A+ +L + Sbjct: 141 SEPLCVLGLRVSAPLAGYFGYFAKKIHPDVRVLTEGGSAAFDALAQARAAGGAWVLCFL- 199 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHA 247 RE A +G +V + +++ + L + + A Sbjct: 200 LPRHPRETLQAMSYARSLGLRVATVADRETGWIRELSDAVLPAEVGTRLV----FDSQAA 255 Query: 248 QGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +L +L AL + A ER+ E +L Sbjct: 256 AMVLAGVLLEALSDAAPKRAQERLEEFEQRAARL 289 >UniRef50_Q7MJB4 Transcriptional regulator n=3 Tax=Vibrio RepID=Q7MJB4_VIBVY Length = 308 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 91/249 (36%), Gaps = 8/249 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N ++ ++ Q L +S+ L +++ + + LA +A VS++++ ++ KLG+ Sbjct: 22 NTYRQLAEQLQSLTESEANLHAFIVGHFEELSYYGIIDLAQKAQVSKATIGRYLNKLGFT 81 Query: 62 GFPALKLALSEALASQPESPSVPIHNQ--IRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ A K AL + L + + + + + ++ I + + Sbjct: 82 GYAAFKNALKQELITNNMVAPIEANKSKLFDQEIDTKTEAQRYIGNVAQLIDQFRQELNI 141 Query: 120 EKLHECVTMLRSARR-IILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQAS 177 E+L + + R I + G +S +A +F+ L N + D L + Sbjct: 142 EELDKLSQKIAEKNRTIYVVGPASSHSLALHFSTLLKYSRSNVVLLPLDKGELPKAMLGI 201 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 S +D+L+A SY + V +T N + ++ + Sbjct: 202 SEEDVLVAFSYYRFNPVVLDITKYFSSKCAFVAMVTNTHSNPYGIYSDVQFVLPSDVDSI 261 Query: 238 NSASISACH 246 + Sbjct: 262 ----FHSRT 266 >UniRef50_A3K9H4 Putative uncharacterized protein n=1 Tax=Sagittula stellata E-37 RepID=A3K9H4_9RHOB Length = 275 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 44/234 (18%), Positives = 91/234 (38%), Gaps = 6/234 (2%) Query: 15 AQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEAL 74 + +++K+A L T + + LAN AGVS +V+++ KLG+ F + A+ + L Sbjct: 7 SGAERKVAAALSETFPTGALGTVEVLANRAGVSGPTVLRYVNKLGFSRFADFQAAVMQEL 66 Query: 75 ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR- 133 Q SP+V + D + + + A+ + + V +L + Sbjct: 67 DRQLGSPAVQMATPSEPQDGGEHLYRRTLLMQAEALRRVADRAVPAEFDRIVDLLTDPKL 126 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASSPDDLLLAISYTGVR 192 I G S +AQ L ++ + + + P DLL+ Y + Sbjct: 127 TIRALGGRYSRNLAQRLVLHLGQVRTQVSLIERPLGFAFDPLVDIGPRDLLVVFDYRRYQ 186 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 ++L A G +++ +T + + + + A L + E + ++ Sbjct: 187 QDLMAFAKAAWGQGARIVLLTDLSRSPVAELAEAVLISPDESP----SPFASRV 236 >UniRef50_UPI00016A65F3 transcriptional regulator, RpiR family protein n=1 Tax=Burkholderia ubonensis Bu RepID=UPI00016A65F3 Length = 224 Score = 123 bits (311), Expect = 5e-27, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 73/201 (36%), Gaps = 4/201 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + RI L +++ +Y+L P A + +LA S ++ +FA+ LG+ Sbjct: 15 SIAARIASAMPSLTPIHRRMGEYVLANPFRAATMRIDELAQAVDASIATANRFAKALGFD 74 Query: 62 GFPALKLALSEALASQPESPSV-PIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+PA++ AL + + + + + + T + Sbjct: 75 GYPAMRAALVRGFEATLAPVERLRSAQEQEAGVRDAAWIDAVFNQAVENIEDTRAQLNAA 134 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAA---AVRDMHALLATVQAS 177 + V + +ARR+++ G G+S +A L N + + + Sbjct: 135 NIEAAVEAIVAARRVLILGAGSSAFLAGLMEHGLSVCHDNVQSLALLGGPSHAARRLYTA 194 Query: 178 SPDDLLLAISYTGVRRELNLA 198 DL++AI++ + Sbjct: 195 DARDLVIAIAFPRYVEDTIEL 215 >UniRef50_A1A2Z7 Putative RpiR-family transcriptional regulatory protein n=2 Tax=Bifidobacterium adolescentis RepID=A1A2Z7_BIFAA Length = 295 Score = 123 bits (310), Expect = 6e-27, Method: Composition-based stats. Identities = 42/287 (14%), Positives = 103/287 (35%), Gaps = 19/287 (6%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + RIR+ + L ++++ A ++L +S +L+ +G+SQ ++ + +KLGY Sbjct: 19 GLVARIRESFDSLTATEREAAQFILGHLTDVLVCNSVELSQLSGISQPTLSRLYRKLGYA 78 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + + P ++ + ++ + ++ T + Sbjct: 79 NAGEFRRDVRR--------VHRPGSPELSRHTQCDDLVADHLRRDEESLKRTFEGIDRAQ 130 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSPD 180 L + +A + + G +S VA + +LM++ N + + + + + Sbjct: 131 LSSACQAMATAPHVAVVGYHSSYPVALHMREQLMRLRGNVDILPNPGQSIAEDLVDYAAG 190 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ I + D ML G V+ I + + A + +S Sbjct: 191 DVIVIIGVGRRLPFFSRLIDVMLERGLTVVVIGDIS----ARNAVIGRNVAFFKVVLSSH 246 Query: 241 SISACHAQGMLTDLLFIAL---IQQDLELAPERIRHSE---ALVKKL 281 +++ A L L+ + + + RI + +L Sbjct: 247 VLTSFTAAFALIALMVDEVGKCLVDTEDEVHARIEGINDCFDALNEL 293 >UniRef50_A0K0I4 Transcriptional regulator, RpiR family n=1 Tax=Arthrobacter sp. FB24 RepID=A0K0I4_ARTS2 Length = 274 Score = 123 bits (309), Expect = 8e-27, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 88/274 (32%), Gaps = 15/274 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M RI + Y L ++K AD LL + ++ +LA +GVS++++ + ++LG+ Sbjct: 1 MRIDERIERHYAELGPQEQKAADTLLDRLGDLAMYNAAELARLSGVSKATMSRLFRRLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + F +K + + + + + E+ Sbjct: 61 EDFNEVK---------EHTRSIRSSGMPLGPQSSDGGLPAHWGQ-EQENLRRLAESLDED 110 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL-ATVQASSP 179 KL L A ++L G S VA +F +L++ + L + Sbjct: 111 KLSAACGKLAGAGTVLLLGFRNSFPVALHFRQQLLQCRPAVSVAPQPGQSLGEELAGLGA 170 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D ++ + G + I L A+ L + Sbjct: 171 GDAVVLFGFRRRPAGFRKVLQGAAATGATTILIGDPGARRLAADAALWLECPVDGAH--- 227 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRH 273 + + A L +L ++ ER+R Sbjct: 228 -AFDSYAAAMSLVSVLANGVLVALGRPGRERVRE 260 >UniRef50_C4L7E2 Transcriptional regulator, RpiR family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L7E2_TOLAT Length = 282 Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats. Identities = 42/249 (16%), Positives = 89/249 (35%), Gaps = 11/249 (4%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 RI + + + +++LA++LL SS +A A VS+ V +F ++LGY F Sbjct: 8 QRIYLQLEQMGPKERQLAEFLLTHEAELAIYSSADMARLARVSKPVVSRFFKRLGYDSFA 67 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 ++ L + ++ P+ + D + + + TL L Sbjct: 68 EVRQDLRK-----VQTSGSPLLADQQPSD-IGTLLANHQAQEARNWQQTLTDLQRLPLDV 121 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSPDDLL 183 + SAR+I + G S VA ++ +L+++ V L + + DL+ Sbjct: 122 IADTMCSARQIKVIGFRNSYPVALHWRQQLLQLRTCVDLVPQPGQTLAEELSQLNEQDLV 181 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + ++ + + + L IT + A L + + Sbjct: 182 IMVAMRRRPVNVKRIMQWLGKSPATCLLITDPSGLEHATHADWTLTC----HQISPGGFA 237 Query: 244 ACHAQGMLT 252 + + + Sbjct: 238 SYASAMAVV 246 >UniRef50_B6G7Y4 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G7Y4_9ACTN Length = 277 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 45/249 (18%), Positives = 88/249 (35%), Gaps = 9/249 (3%) Query: 20 KLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPE 79 ++A +L D + +S Q+A+ VS++SV +F + LGY+ F + AL + Sbjct: 23 QIAVKMLENYDALKDMSIAQIADMCYVSKASVSRFCRFLGYESFKEMHDALGIDYPISYD 82 Query: 80 SPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTG 139 +E + AT++ + +L + + + R+ Sbjct: 83 YSQRFF---CNLTADPHAAFLDYAREAQQNIAATISEKNLAELPKIAYAIHNCCRVAFFS 139 Query: 140 IGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRR-ELNLA 198 + KL +G D + LA ++ +DL + S G Sbjct: 140 HHFLWDTGRYLQNKLFSMGKVMDLHLDQASQLACARSLQSEDLAIICSVGGSYPMRYVDV 199 Query: 199 ADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIA 258 + + VLAIT T N +A+ + ++A+ + + DL+ Sbjct: 200 CNSIRDSKCSVLAITQNTSNPYWNQATFIMQCG-----ESNANDTGKYGALAAIDLVVQQ 254 Query: 259 LIQQDLELA 267 + Q A Sbjct: 255 YLLQYGSDA 263 >UniRef50_C4ICI5 Transcriptional regulator, RpiR family n=2 Tax=Clostridium butyricum RepID=C4ICI5_CLOBU Length = 240 Score = 121 bits (305), Expect = 2e-26, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 89/230 (38%), Gaps = 29/230 (12%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L+Q ++ + YL+ D + + +A + S S++++ A+KLGY GF L +L Sbjct: 12 KLSQIEETILTYLIENIDICINKGIRSIAKDNFTSPSTIIRLAKKLGYSGFVELMYSLKN 71 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 L++ + L + + +N N N ++ + + ++ Sbjct: 72 KLST----------------ETLDTFFDGINDKNI------FNTNYDKACEDFIECIKD- 108 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR--DMHALL-ATVQASSPDDLLLAISYT 189 I+++G G S +V++ KL+ +G + D L + ++ +S + Sbjct: 109 GNILISGEGFSEIVSKYMYMKLLVLGKKSILSTFIDFDILFDNHADTINS---IILVSKS 165 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 G + K+++ TG + L + + E+ N Sbjct: 166 GEGNHCVNSCIHAKERNLKIISFTGNVESTLAKNSDITFIIPDCEKMDND 215 >UniRef50_UPI00016AAD50 transcriptional regulator, RpiR family protein n=4 Tax=Burkholderia pseudomallei RepID=UPI00016AAD50 Length = 216 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 69/188 (36%), Gaps = 7/188 (3%) Query: 97 LVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMK 156 + + ++ A + T + V L +ARRI + G+GAS +A L Sbjct: 12 ELIDASFEQALANLERTRGRLDRANVEAAVDSLLAARRIFIVGMGASAFLAGLMEHGLSV 71 Query: 157 IGFNAAAVRDMHALLATVQAS---SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 N ++ + + DDL++AI++ + G VLAIT Sbjct: 72 YRDNVQSLALLGGPTDAARRLFSARGDDLVVAIAFPRYVHDTIELTRRAAERGAPVLAIT 131 Query: 214 GFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRH 273 + + A+ L+ AE + ++ A L + L A+ + A Sbjct: 132 DGPDSPIAPFAARALFVHAE----RRLAATSEAAVLALVEALIDAVAHRSQRSARAAAEV 187 Query: 274 SEALVKKL 281 +E ++ L Sbjct: 188 TEFMLPWL 195 >UniRef50_C9N979 Transcriptional regulator, RpiR family n=2 Tax=Streptomyces RepID=C9N979_9ACTO Length = 282 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 46/276 (16%), Positives = 101/276 (36%), Gaps = 21/276 (7%) Query: 5 LRIRQRYQ--GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R+++ ++ L + +++A ++ + A LSS +LA AGVSQ SV +FA LG+ G Sbjct: 8 ARLQRLFEGQRLTPTQRRIAHSMVRRAADAPFLSSVELAELAGVSQPSVTRFAVALGFDG 67 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN-SEEK 121 +PAL+ L E +D + + + + + Sbjct: 68 YPALRKHLRE-------VSPADAAAVDGVEDTFNEYQQAV-RAEIENLRQLSELLADPAP 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLA----TVQAS 177 + +L ++R +++ G+ A+ A+ F + K+ + V + ++L + + Sbjct: 120 VERAGRLLAASRPLLVLGLRAASSQARGFGYFAAKVHPDVRVVDEGGSMLHDRVDAARRA 179 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 L+ + RE+ A G V+ + + + + Sbjct: 180 GA-SALMCFALPRHPREVVDALAYAREQGLTVVTVADSAFAPVAAHSDVLIPAAVGTGLA 238 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRH 273 + + +L + + L A R+ Sbjct: 239 FDTACAPMLMGRVLLEAMCDGL-----PEAQARLEE 269 >UniRef50_Q0FH55 Sugar isomerase (SIS) n=2 Tax=Rhodobacteraceae RepID=Q0FH55_9RHOB Length = 285 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 60/277 (21%), Positives = 102/277 (36%), Gaps = 12/277 (4%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 R+ + Y L ++++AD LL P L++ +LA AGVS ++V +F ++LGY+ F Sbjct: 16 RVHEAYGSLPDGERRIADVLLGNPGELAMLTATELAAAAGVSNATVSRFFRRLGYESFEQ 75 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 K + L L++ + +TL + L E Sbjct: 76 AKRQ-ARRLRETGSPLYTGSATPASKR------ISDLLQSEVTVLESTLTRLNPVTLREI 128 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAA-AVRDMHALLATVQASSPDDLLL 184 V + +A RI G S +AQ +L +I + + + DL + Sbjct: 129 VEAMATAPRIRTLGYRNSHFLAQYVTAQLGQIRRAVSPLLLPGQTQAEGIALMDKGDLAV 188 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 I E+ R G ++L IT T A+ + E A S + S Sbjct: 189 VIGLRRRPAGFTSVVQEISRRGARILLITDKTIREAPAHATWTIDCQV-ETAQYSDAYS- 246 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + LL + + E + EAL ++L Sbjct: 247 --GALAVLRLLAVETRRALGEAGQTYLEEVEALRERL 281 >UniRef50_Q6XYV4 Transcriptional regulator n=2 Tax=Spiroplasma RepID=Q6XYV4_SPIKU Length = 271 Score = 120 bits (303), Expect = 4e-26, Method: Composition-based stats. Identities = 41/255 (16%), Positives = 99/255 (38%), Gaps = 17/255 (6%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 + + + ++ Y+ + + LA + S++ +K+ G+ +A++ Sbjct: 14 KNFTKKENEIIKYIKENMKEVTTKNIEVLAQQVNTGYSAIYGLLRKMQINGYRDFLIAIA 73 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 + + + + + +K + + EK+++ + ++ Sbjct: 74 ADIEIKSLDF-----------ENMESLMKK---TYFDILNQNDTMIDNEKVNQTINAIKG 119 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLAT-VQASSPDDLLLAISYTG 190 A RI + G+G++ ++Q A +L + GFNA + + L + + +DL+LA S G Sbjct: 120 AYRIFVIGMGSTNALSQTLALELYRFGFNAFNLNENEEDLMVRSRIMNKNDLILAYSLFG 179 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRAS--HCLYTIAEEQATNSASISACHAQ 248 +N A G ++ I+G + + A+ H + T + + ++ Sbjct: 180 DNESVNKALTIAKEKGVTIVVISGKDMSKAVKLANLSHIISTPNQRVNDHKIYVNKLLPW 239 Query: 249 GMLTDLLFIALIQQD 263 TD L + D Sbjct: 240 MYFTDDLINKVWSSD 254 >UniRef50_Q041A4 Transcriptional regulator n=8 Tax=Lactobacillus RepID=Q041A4_LACGA Length = 227 Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats. Identities = 40/265 (15%), Positives = 95/265 (35%), Gaps = 42/265 (15%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN I +++ L ++K+ Y+ + ++++ ++LA S S +VK +K+ Sbjct: 1 MNI-QTISEKF-QLNTDEQKILIYMNQHRNEIKNINIRELAKRTFTSPSFIVKTCKKMKL 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ L +++A + + + L+ ++ +M Sbjct: 59 SGYSELVFLIADAPNFPNNTENDL------KVESYVKPFSNLMDKHKDSM---------- 102 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 I++ G G S +A + L GF + + L + Sbjct: 103 --------------IMILGSGYSQNIANYMSEYLNLNGFRCTSNSHLEMLRKH-----KN 143 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 L++ IS +G + L + + V++ TG + + + ++ + N Sbjct: 144 TLIIIISNSGETKRLAELCIQAQKNNRDVISFTGDKNSTIAKHSTLAI----SSDTFNPT 199 Query: 241 SISACHAQGML-TDLLFIALIQQDL 264 S + + Q L++ L+ + Sbjct: 200 SFDSHYPQLFFGLTLIYFELLMSNF 224 >UniRef50_Q1QYQ3 Transcriptional regulator, RpiR family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QYQ3_CHRSD Length = 286 Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 99/279 (35%), Gaps = 15/279 (5%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 + GL+ +++ L L + + LA ++GVS ++V +F ++LGYKG L Sbjct: 14 VDALKGGLSPAERALYSTLQANLENLAFETGASLAQKSGVSPNTVSRFMRRLGYKGLSGL 73 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 K AL L S + I + L + A+ A + + + V Sbjct: 74 KSALRNELRSNSLLNATLIERVAQQPADLTT----HLNAEIEALKAFAEQLTGQHWQDIV 129 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL---L 183 + A R+ + G +AQ+FA +L + + +L D+ + Sbjct: 130 QRVSDAERVFVCGFQTVRGLAQDFANRLALVRPGVEFIDLYSGVLGQ--WMDSQDVRCCV 187 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASH-CLYTIAEEQATNSASI 242 + I T A+ L ++ + + + + ++ E S Sbjct: 188 ILIDITPYAEAGITFANHCLAHDADLVVFSDEYG--IARYIDTPHIISMTTETGLILEST 245 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + ++L + E ER+ A V++L Sbjct: 246 GGLTSAL---NVLLHCVAADHKEELRERMEAYRARVQQL 281 >UniRef50_A4EA48 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EA48_9ACTN Length = 187 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 64/177 (36%), Gaps = 1/177 (0%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG 158 E++ + T + +L ++ +AR++ + + A F +L G Sbjct: 1 MERMEGLYQNTLAETQELLDPTQLDHATKLIANARQVDIYTGSHNLYPAGMFRDRLFSAG 60 Query: 159 FNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPN 218 +A ++ + T AS PD + +AISY+G+ L + V+ I Sbjct: 61 KSATCHDNIEPQVCTALASGPDHVAIAISYSGLAPNLKDILPILSSRHVPVIVIGTPHCA 120 Query: 219 ALQQRASHCLYTIAEEQ-ATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 + + L E ++ A + D L+ + +D E + HS Sbjct: 121 RIHPGFAAYLTVSDHESMTHRITQFASHIAVQYVLDSLYSSYFAKDYARCSEFLEHS 177 >UniRef50_Q4A7H2 Putative uncharacterized protein n=6 Tax=Mycoplasma RepID=Q4A7H2_MYCH7 Length = 259 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 52/242 (21%), Positives = 96/242 (39%), Gaps = 5/242 (2%) Query: 18 DKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQ 77 DK++A +LLL L + +A A S +SV+KF +KLG+KG L AL + Sbjct: 21 DKEIAGFLLLNIQKIMSLKLEIIAKSANCSTASVIKFCKKLGFKGLKDLLPALDRNYSYL 80 Query: 78 PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIIL 137 N+I + + K + N + + + V +L+ R I+L Sbjct: 81 NFQKKRYSENKISQKN---QILSKYHLLIMNNLDKIYN-LNYNSMIKFVKLLQKTRHIML 136 Query: 138 TGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNL 197 G G++ FA L K+ ++ D + S + + S++G+ ++ Sbjct: 137 FGKGSNLESINIFANYLSKLQYHIDYHYDFEVQQKWTEKSIDSSVCVFFSFSGMHSIIDE 196 Query: 198 AADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFI 257 ++M ++A TG + L +++ T E + SA + L + Sbjct: 197 LVNKMKAKNCIIVAFTGNFESNLYKQSLISFLTFKNEDVLENH-TSARISFIYLVMQIIN 255 Query: 258 AL 259 L Sbjct: 256 LL 257 >UniRef50_A9DTL4 Transcriptional regulator, RpiR family protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DTL4_9RHOB Length = 309 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 42/270 (15%), Positives = 95/270 (35%), Gaps = 5/270 (1%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L++++ ++A ++ D ++ LA AGVS+ +V +F ++LGY+ F A K A++ Sbjct: 21 NLSKAESEVALWVERNFDNLPFETAADLAVGAGVSEMTVSRFVRRLGYENFKAFKAAVNA 80 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 +I D + ++ A+ + + + + +++ A Sbjct: 81 EFRKSDSDEGSLRSRRIAIPDGTGSELDAQLQLELDAIVEVYRMAATPQWDAALDVVQKA 140 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD-DLLLAISYTGV 191 + + +TG A +FA +L + + P ++ + Sbjct: 141 QHVNITGFQGVKGTAMDFATRLKYARPGVRFADGRSGNWSELFIEEPQTSCVIMVEVVPY 200 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGML 251 E A+ LR ++ +T ++ H L + + + L Sbjct: 201 AHEAVKVAELCLRRDVPLIMVTDQYSAWPRKYTPHVLSVATSTRTF----LDSTAGIAAL 256 Query: 252 TDLLFIALIQQDLELAPERIRHSEALVKKL 281 L + + A +R+R L Sbjct: 257 LGLFLSGITARVGAPAQDRLREMRELAAHF 286 >UniRef50_A8GDB9 Transcriptional regulator, RpiR family n=1 Tax=Serratia proteamaculans 568 RepID=A8GDB9_SERP5 Length = 237 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 44/229 (19%), Positives = 87/229 (37%), Gaps = 32/229 (13%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L+++D + + +L PD + L+ S S+VV+ A+KLG++G+ L + Sbjct: 11 DLSKTDLAILNCILDNPDACIDEGIRALSARCYSSPSTVVRLAKKLGFRGYLELVYFIKF 70 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 LA P + + V + ++ L++ E Sbjct: 71 NLAMAPAYLA----------EKSAPVAVSVQQQA-----QFLDLLDEG------------ 103 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAA--AVRDMHALLATVQASSPDDLLLAISYTG 190 +I++ G G S LVAQ K M +G ++ D L + +++ IS +G Sbjct: 104 -KILIHGSGFSQLVAQYMYNKFMTLGIDSYLSLWPDFDILDRETRFRFN--MVIVISKSG 160 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 ++ + R ++ A G + L Q+A ++ + Sbjct: 161 NSGSALNWSEAVKRNDIRLAAFCGDGDSPLAQQADMSFIYEDRKKYDHD 209 >UniRef50_Q0FJM2 Putative uncharacterized protein n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FJM2_9RHOB Length = 274 Score = 117 bits (295), Expect = 3e-25, Method: Composition-based stats. Identities = 55/280 (19%), Positives = 107/280 (38%), Gaps = 11/280 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L R+R + L +++ KL +LL P +Q+LA GVS+++V +F ++LG++ Sbjct: 2 FLARVRAQLPDLHRAEYKLGCFLLEFPGDLASYDAQELARLCGVSKATVSRFVRRLGFEN 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + A A + + + I + R + E + ++ + T + L Sbjct: 62 Y----DAARRAARDERQQCNGQISVRPRLRTGTTEISETV-RDEIDNLIWTYQQVDTDDL 116 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL-ATVQASSPDD 181 + S+RR+ L G + A +L+++ A++ L V +PDD Sbjct: 117 ESLADAVVSSRRVWLVGFRLCRVFADYLQTQLVQVAPTCASIPQPGVSLGEYVTEIAPDD 176 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++ ++ DE+ R G + I G L E Sbjct: 177 LVICMALGRREGRTEALLDELRRSGVPIALI-GDEEAGLAAGVRWQFRCRTETSEAQE-- 233 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + A L + Q+ +A R+R + + +L Sbjct: 234 --SHAAVLSLCSQIGARATQRAGAIARSRLRRIDEVNARL 271 >UniRef50_O27589 Conserved protein n=6 Tax=Methanobacteriaceae RepID=O27589_METTH Length = 254 Score = 116 bits (292), Expect = 7e-25, Method: Composition-based stats. Identities = 44/217 (20%), Positives = 86/217 (39%), Gaps = 23/217 (10%) Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR 133 + S P+V I ++ + ++ ++ I++ + E L + +L SA Sbjct: 38 IRSDGPFPTVFISYRVYIGIGVAMIIKEAIRDIIHNLEKMERDIDERTLDNFIEILTSAA 97 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRR 193 + + G+G SGLVA+ FA +LM + NA V + A + D+L+AIS +G Sbjct: 98 NVFVLGLGRSGLVARAFAMRLMHLEINAFVVGET-----ITPAINEGDVLIAISGSGRTS 152 Query: 194 ELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS---------ASISA 244 + AA G KV+A+T + + L A + + + + Sbjct: 153 YIVNAASIARERGAKVVAVTSYPDSDLAGLADLTVTIKGRTKIDGEKDYMKRQMRGNHHS 212 Query: 245 C--------HAQGMLTDLLFIALIQQDLELAPERIRH 273 + + D + L+++ + E + H Sbjct: 213 RTPLGTLFEISALVFLDGIIAELMER-FDKREEDLHH 248 >UniRef50_Q15U63 Transcriptional regulator, RpiR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15U63_PSEA6 Length = 272 Score = 116 bits (292), Expect = 7e-25, Method: Composition-based stats. Identities = 52/282 (18%), Positives = 105/282 (37%), Gaps = 24/282 (8%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + RI Q+YQGL+ + + +AD+L P S Q+A + S+++V +F ++LGY Sbjct: 6 FIERIEQQYQGLSPNARLIADHLQHTPLDVLSCSVAQIAEKTQTSKATVSRFFRQLGYDS 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 K L+ A+ + + T + + +L Sbjct: 66 HHDAKQELNTFRANGYPMYMESDQGGA-------------LNREIQRIEQTWSNLDQTQL 112 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL-ATVQASSPDD 181 + + + A RI L G S VA +F +L++I + L ++ S D+ Sbjct: 113 NGLIQSICQASRITLIGFRNSYPVALHFRQQLLQIRSKVRLLPQPGQTLSEELRDISEDE 172 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHC--LYTIAEEQATNS 239 L++ + + + D++ +LA + A L Q Sbjct: 173 LVILVGFRRRPKIFKPLLDKIQHHNVALLA---DPSGQI--YADQVKQLIIC---QLGQE 224 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++ + A + ++ + + A RI +L ++L Sbjct: 225 QALDSYAAPMSVISIICNQVFTLLDKTADRRISEISSLYEEL 266 >UniRef50_UPI0001C35662 hypothetical protein ChatD1_20770 n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35662 Length = 260 Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 40/267 (14%), Positives = 100/267 (37%), Gaps = 18/267 (6%) Query: 2 NGLLRIRQRYQGL-AQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 + I+ + +++ +A ++ D S QQ+A+ S +++ +F +KL + Sbjct: 9 SITRLIQIVNDNMANETEWDIAVQMIKHMDEIPGASIQQVADICHCSIATISRFVKKLNF 68 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + F + L+ L + SP + + + E ++ + S + Sbjct: 69 ENFSTFRYKLAMDLFN---SPKLNLKMPGEYQIDYAELKENYLETVKTQIDELEKGLSLD 125 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ V +L +A I++ G A F L G + V+ + + + Sbjct: 126 EIERAVELLHAAETILIYSHGDLDFHA--FQVDLAMHGKASWHVKGYSEMKKALDTLHDN 183 Query: 181 DLLLA--ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 +++A S + + + +G K++ ++ + N ++ A E + Sbjct: 184 TVVIAPLFS----TQNGRQNVEMLHNLGIKMIIVSRGSVNVYEKYADAFFRIRMSETKMD 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLE 265 I +L D+L + ++ +E Sbjct: 240 DYLI------HLLFDILSMHYRKRYME 260 >UniRef50_Q8U472 Hexulose-6-phosphate synthase (D-arabino 3-hexulose 6-phosphate formaldehyde lyase) n=2 Tax=Pyrococcus RepID=Q8U472_PYRFU Length = 434 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 5/153 (3%) Query: 93 DPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAW 152 D +K +K+ T + + E++ V + A +I + G G SGLV + FA Sbjct: 257 DEYMRTIKKAMKDITEHINEVADKLKLEEVRGLVDAMIGANKIFIYGAGRSGLVGKAFAM 316 Query: 153 KLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAI 212 +LM + FN V + A DLL+AIS +G + + AA+ + GGKV+AI Sbjct: 317 RLMHLDFNVYVVGET-----ITPAFEEGDLLIAISGSGETKTIVDAAEIAKQQGGKVVAI 371 Query: 213 TGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 T + + L + A + + A Sbjct: 372 TSYRDSTLGKLADVVVEIPGRTKTDVPTDYIAR 404 >UniRef50_C3RNI1 Predicted protein n=2 Tax=Bacteria RepID=C3RNI1_9MOLU Length = 274 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 30/240 (12%), Positives = 72/240 (30%), Gaps = 7/240 (2%) Query: 22 ADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESP 81 A +L + +A VS +++ + +KL Y+ F K+ ++ L Sbjct: 25 ARKILQNIYVIPGSTITDVAELCFVSTATISRLCRKLNYESFADFKIDITMNLNYFNRDT 84 Query: 82 SVPIHNQIRGDDPL----RLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIIL 137 + + V + + T S E L V + A ++ Sbjct: 85 LRLQFDHQLPQRQYLHKGKEVFKAHFDNILDNLKETYESVSYEDLEFIVDKIHDANKVCF 144 Query: 138 TGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYT-GVRRELN 196 G + V+ +L +G + + + + TV+ +D+++ S G + Sbjct: 145 AGNFFTQSVSMQLQIELSYLGKECSGMYPLEQQILTVEGLDENDVIIVSSIAGGFMTDHP 204 Query: 197 LAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLF 256 + + + I+ L + + + + L+ Sbjct: 205 DVMRVISKSPAYKIVISQLDEFVYSDSIDMILKVGTDHHSLIGKFSITYI--FEVLEALY 262 >UniRef50_D2Q6J1 Sugar isomerase or sugar amino transferase n=6 Tax=Bacteria RepID=D2Q6J1_9BIFI Length = 183 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 73/169 (43%), Gaps = 10/169 (5%) Query: 100 EKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF 159 ++++ + + E L + ++ RI G G SG A++FA ++M IG+ Sbjct: 5 NRVLERIVEEIQGVIARMDENDLERAMALITKGSRIYAAGEGRSGFQARSFAMRMMHIGY 64 Query: 160 NAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNA 219 + + + + D+LLAIS +G R A+ +G +V+A+T + + Sbjct: 65 TSYMMGET-----ICPSMREGDVLLAISGSGKTRRTVEDAEAAKNLGVRVIAVTSKSDSP 119 Query: 220 LQQRASHCLYTIAEEQATNSASI---SACH--AQGMLTDLLFIALIQQD 263 L A + + +S SI S+ + + D L + L ++D Sbjct: 120 LASVADAVIVVPGRVKGESSGSIQLLSSLFDQSVHIALDALCLMLSRRD 168 >UniRef50_Q7MCJ0 Transcriptional regulator n=4 Tax=Vibrionaceae RepID=Q7MCJ0_VIBVY Length = 215 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 40/244 (16%), Positives = 86/244 (35%), Gaps = 40/244 (16%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 ++ + +YL+ +S++ +AN+A + +SV + +K+GY + L+ L Sbjct: 1 MNTFRGIERVIYEYLIGHASQLHEISAKTIANKALTTTTSVNRVCKKMGYASYTELRYKL 60 Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 + L Q ++ + + + L Sbjct: 61 ANELKKQAQNQEG-------------------------------EECEQSVISQVAKTLS 89 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 + + L GAS + + L + D+H L + +LL IS +G Sbjct: 90 GSPVVYLYSRGASIVSVNYLSRFLSLANVPHLVITDIH-QLTRAELG----MLLLISKSG 144 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGM 250 + + A R G KV+ I + L Q + + E+ + S+ + +Q Sbjct: 145 ETQAVVEMAHNAKRKGLKVMGI-SRKGSTLAQSSHLNIPL---EEQVDGISLYSRESQIH 200 Query: 251 LTDL 254 + ++ Sbjct: 201 ILNI 204 >UniRef50_B9Y5H0 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5H0_9FIRM Length = 263 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 53/278 (19%), Positives = 101/278 (36%), Gaps = 30/278 (10%) Query: 1 MNG--LLRIRQRYQGLAQSDK-----KLADYLLLQPDTARHLSSQQLANEAGVSQSSVVK 53 M L + + L ++++ LA+Y L L+ +A + VS+SS+ + Sbjct: 1 MKINRLSLLNSLFNVLNENNQGDPYFILAEYFLEHYHELSRLNIYDVAADCFVSRSSIRR 60 Query: 54 FAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYAT 113 F Q +GY+ F A K ++ + E L +E A + Sbjct: 61 FCQAIGYENFVAFKDEFAQY---------DDQRASFQKHAGRENYRETLTQEINAMIAEL 111 Query: 114 LNVNSEEKLHECVTMLRSARRIILT--GIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL 171 + ++ + AR ++ +GA+ VAQ F ++ V DM+ + Sbjct: 112 DQRMNTAEVERLAERIHDAREVVFLTSSVGATS-VAQ-FQHSMIFQNKVIRMVSDMYENI 169 Query: 172 ATVQASSPDDLLLAISYTGVRRELNLAA--DEMLRVGGKVLAITGFTPNALQQRAS--HC 227 V+ +DLLL IS +G L AA D + + T + + Sbjct: 170 DFVKHLQKEDLLLVISGSG----LFAAASRDYLRDNPAYKILFTLNRSHDFDDVYDTIYH 225 Query: 228 LYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLE 265 L Q S + + + D+L+ +++ + Sbjct: 226 LSAADRSQEAKSVYYT--YGTIYVLDVLYSVYVKKYGD 261 >UniRef50_D0D8D8 Transcriptional regulator, RpiR family n=1 Tax=Citreicella sp. SE45 RepID=D0D8D8_9RHOB Length = 290 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 43/247 (17%), Positives = 92/247 (37%), Gaps = 7/247 (2%) Query: 15 AQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEAL 74 + +++KLA + + + LA AGVS +V+++ KLG+ F + A+ + Sbjct: 17 STAERKLAAAFAENFPGSALGTVESLATRAGVSGPTVLRYLAKLGFPRFADFQEAVKAEI 76 Query: 75 ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR- 133 Q SP I + + + + ++ + + +L +R Sbjct: 77 DRQLGSPLQQIDRA-KDGGAEHHLYRRALLMQAESLRRAADQAVPAEFDAIAELLSDSRL 135 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSPDDLLLAISYTGVR 192 + G S ++AQ A +L ++ + + + T+ P DL++ Y + Sbjct: 136 HVRPLGGRYSRILAQRLAMQLSQLRPDVTLLDMQLGFAYDTLVDLGPRDLVVIFDYRRYQ 195 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLT 252 EL A+ G +++ +T + + Q A L E + + Sbjct: 196 EELLSFAEGARAAGARIVLLTDPWRSPIAQLAEAVLTAPDET----LSPFGSRVVPTAQV 251 Query: 253 DLLFIAL 259 + L A+ Sbjct: 252 EALVAAV 258 >UniRef50_A6M2T4 Transcriptional regulator, RpiR family n=3 Tax=Clostridiales RepID=A6M2T4_CLOB8 Length = 265 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 42/267 (15%), Positives = 110/267 (41%), Gaps = 32/267 (11%) Query: 1 MNG-LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M + +I Y L+++++++ Y+L D+ + +A S ++++K ++KLG Sbjct: 25 MKFDIYKIADNY-KLSETERQVLQYILTNIDSVLTKGVRDVATINYTSAATIIKLSKKLG 83 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 Y G+ + L+ + + + +E+T+ + + ++ Sbjct: 84 YTGYVDMIYRLNFIVKNHQNN-----------------------QEHTSDITSFISEIEN 120 Query: 120 EKLHECVTMLRSAR--RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 +K+ + ++M+ R I +T G S +A F K++ +GF ++ + Sbjct: 121 KKIEDFISMIIKHREDIIFITATGFSDSIADFFWRKMLVLGFKC--IKTNSYGVYDSNQI 178 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT-IAEEQA 236 L++ IS +G + D + ++ TG + N + ++A+ +E Sbjct: 179 G-GALVIGISKSGETESITKVIDYASKNELDIITFTGKSENHMAKKATLNFMILDDKELD 237 Query: 237 TNSASISACHA-QGMLTDLLFIALIQQ 262 + + + +A ++ + L ++ Sbjct: 238 DRNLTANYFYARVMIVMEYLLDKVMSN 264 >UniRef50_C4X1H8 Putative uncharacterized protein n=3 Tax=Klebsiella pneumoniae RepID=C4X1H8_KLEPN Length = 249 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 47/242 (19%), Positives = 94/242 (38%), Gaps = 11/242 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + ++++ + + + ++A ++L S +LA AGVS +++ +FA+ +G Sbjct: 3 MDIVGQLQEGMRRFSAQESRVATFILQNLSFTASASIDELAASAGVSPATITRFARSVGC 62 Query: 61 KGFPALKLALSEALASQPESPSVPIHN-QIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 L+ L++A + + + D L +G L ++ +E Sbjct: 63 DDIRDLRKQLAQASERRASWLTPDSAALPVAWRDKLSSLGVTLTRQLGHT--------AE 114 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMK-IGFNAAAVRDMHALLATVQASS 178 + +C + L SAR + +GA + + G +D + T + Sbjct: 115 AAVEKCKSRLLSARAVHCFALGAQDVTLAALLQHQLLPSGIAINLCQDAALMRLTASTLN 174 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D LLL ++ L A + G ++A+T L AS L A+ Q Sbjct: 175 DDHLLLVLATAEANPVLQSATLQARTQGVTIIALTPEQHA-LGDMASAILPLPADPQQAR 233 Query: 239 SA 240 A Sbjct: 234 YA 235 >UniRef50_B0N144 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0N144_9FIRM Length = 260 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 43/269 (15%), Positives = 95/269 (35%), Gaps = 25/269 (9%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + R +A Y+L D + +++++LA+ VS+SS+ +F +K+GY+ Sbjct: 10 NVINRESSNSMNF-----IIAQYILENLDRRKVITTKELADNCNVSKSSISRFCRKIGYE 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDD--PLRLVGEKLIKENTAAMYATLNVNSE 119 F L+ A++ + + I + D + + + + Sbjct: 65 DFMELQYAIA--------TYNSFIAERFSHIDGVTTKDYVVNYFERSKEIINYLNQNMDT 116 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L E V + +R++L G S A + + L + + +D + ++ Sbjct: 117 DTLEELVKDIHDYKRVVLMGHVQSSFPAISLQYYLTILHKFIYSTQDPNEQREMLETLDD 176 Query: 180 DDLLLAISYTGV-RRELNLAADEM-LRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 +L++ S G + M G K+ IT + E + Sbjct: 177 QNLIIIFSAGGRFLERVLDRLSVMDRENGPKIYMITAN------KLKHFPFVHKYIELSE 230 Query: 238 NSASISACHAQGM--LTDLLFIALIQQDL 264 + S+ + L L++ + Sbjct: 231 EFSYSSSVILEMYSNLISLIYHKKYTDNY 259 >UniRef50_C3RLJ5 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RLJ5_9MOLU Length = 229 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 45/265 (16%), Positives = 93/265 (35%), Gaps = 43/265 (16%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN +R ++ L + + L YL + + ++ +Q+A+ S S++ + K G+ Sbjct: 1 MNI-EHLRDKFD-LNELELALVKYLEDNQNNLKDITIRQMASANFTSTSAIYRLCNKFGF 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ + LS + +Q SP ++ A Sbjct: 59 SGYSDMIYQLSSSNNTQLFSPDD-------------------FEQYIPAF---------- 89 Query: 121 KLHECVTMLRSAR--RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 + +L R II+ G+G S +A +L GF A V L Sbjct: 90 -----IELLNKHRQHNIIVFGMGFSAPIADYLQQRLTLNGFYAMNVVHTEMLDI---KYQ 141 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 + L + IS +G+ L D + +++ + L Q + + + T+ Sbjct: 142 DNSLFIVISNSGITPRLVEIVDNAFKNNIDIISFIANENSNLYQNVTLPIIVGSYNSFTH 201 Query: 239 SASI-SACHAQ-GMLTDLLFIALIQ 261 + + + Q ++ + L + Sbjct: 202 NNLVPNTFFGQVLIVFESLLYTYLS 226 >UniRef50_C0X7I6 Phosphosugar-binding transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X7I6_ENTFA Length = 240 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 92/272 (33%), Gaps = 53/272 (19%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L +++ Y L +++ ++ YL Q A LS +++A S SS+++ A+KL Sbjct: 1 MN-LDYLKETYH-LTKTESQILYYLDQQSTNAADLSIREVAKHCFSSPSSIIRLAKKLNL 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ L L EA SQP + Sbjct: 59 SGYNELIYKLKEAHFSQPIPYETAPSFETT------------------------------ 88 Query: 121 KLHECVTML--RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 +E +L + ++ G S +A + G + H++ ++ Sbjct: 89 --NEFCRLLAKHKSHLFVILGHDFSRHLAAYISEVFNFHGIPSITTAHTHSIN---SQNN 143 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 + L + +S++G + L A +++ G + L + A T + Sbjct: 144 QNFLFIILSHSGEEKYLKETALLAKEKKHPIISFVGAKNSTLGRLADLVFSTDS------ 197 Query: 239 SASISACHAQ--------GMLTDLLFIALIQQ 262 + S AQ + + L A + Sbjct: 198 YSPFSTSVAQPQMFFGQTLITFEALICAYLNH 229 >UniRef50_O67500 Uncharacterized phosphosugar isomerase aq_1546 n=4 Tax=Bacteria RepID=Y1546_AQUAE Length = 322 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 72/177 (40%), Gaps = 4/177 (2%) Query: 91 GDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQN 149 + L ++I+E + L+ E + V +LR+ ++ILTGIG SG +A+ Sbjct: 2 EEKDLLEFAREVIREEIKGLERLLSSLD-ENFSKAVEILRNCEGKVILTGIGKSGHIARK 60 Query: 150 FAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKV 209 + L G + + AL + D L+AIS +G E+ + V Sbjct: 61 ISSTLSSTGTPSVFLHPAEALHGDMGLLDSKDALIAISNSGESTEVLYVLQYAKALNIPV 120 Query: 210 LAITGFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQDL 264 + ITG ++L + + L + + N A + L D + + L++ Sbjct: 121 IGITGNEKSSLAKYSDVVLKIPVDREACPFNLAPTVSSTVTLALGDAIAMTLMKLKG 177 >UniRef50_D2TXX6 Hex regulon repressor (RpiR-family transcriptional regulator) n=1 Tax=Arsenophonus nasoniae RepID=D2TXX6_9ENTR Length = 193 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 75/157 (47%), Gaps = 7/157 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L +I ++ L +S+KK+A+ +L+ P A HL L A VS+++V + +++ Sbjct: 1 MNILEQINNSFENLNKSEKKVANLILVNPQNAIHLCIAALVKLANVSETTVNRLCRRMDT 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGFP KL L+++L + S + + + +K+ + A + + + Sbjct: 61 KGFPNFKLRLTKSLPNGASYFSRLLDQDV----TVISYRQKVFQSAIAELGIVKDNLNTT 116 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKI 157 +++ + +L ++I GIG A ++ + Sbjct: 117 RINRAIDLLTQIKKIAFFGIG---FRAAYANIYMLMV 150 >UniRef50_Q88GX5 Transcriptional regulator, RpiR family n=7 Tax=Proteobacteria RepID=Q88GX5_PSEPK Length = 307 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 54/286 (18%), Positives = 94/286 (32%), Gaps = 11/286 (3%) Query: 1 MN--GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 M+ R+ +G A S +K+A Y+L +S +A + GVS+SSV ++ + L Sbjct: 18 MSQLIKQRLENSLEGAAASGRKIATYMLANLHELPFQTSASIAAKLGVSESSVGRYCRSL 77 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 GY ALK L L P + + + D G ++ AA+ Sbjct: 78 GYAHLKALKQDLQNDLGDGPWLVGDRLQDYRQNQDASDNAGS--LELEIAALVRVHEYRQ 135 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKI--GFNAAAVRDMHALLATVQA 176 H L S R+ + G +A + L + G + H + Sbjct: 136 SPAWHNVAQRLASKPRVFIAGFQTERGIAMCMSHLLQYLRDGVQLVDISAGHFGEVLLGR 195 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 + D L+ R + + G V +T + A E Sbjct: 196 A-EDSALVVFEARRYSRHALMLCQKAREAGIAVTLVTDTFCDWADANADEVFRIPT-EFN 253 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 S S + L + ++ +R+ + AL + V Sbjct: 254 LFWESTSTMLSWVHLM---VNEVCKKLGPDVEKRLEATAALHNEFV 296 >UniRef50_C4ICA8 SIS domain protein n=2 Tax=Clostridium butyricum RepID=C4ICA8_CLOBU Length = 234 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 42/253 (16%), Positives = 88/253 (34%), Gaps = 38/253 (15%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L+ SD K+ +Y++ P + +QLA S +S+++ A+KLGY G+ L + + Sbjct: 15 NLSDSDIKILEYIVDNPGKVQKEGIRQLAKINFTSTASIIRLAKKLGYSGYNELIFDVKK 74 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK---LHECVTML 129 + +++ N+ + K L E Sbjct: 75 MTSE-------------------------------SSIKDRQNLVNNSKFPSLDEINFYF 103 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYT 189 + I + G G V KL+ +N + + + + +P LL IS + Sbjct: 104 NKNKYIYIYGEGFCEFVTGYIHRKLLVKKYNVILLHGLEIPIVYDEMHNP--TLLLISKS 161 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE-QATNSASISACHA- 247 G ++M G V++IT + + + + + + + Sbjct: 162 GENFSCINKIEQMRSFNGNVVSITSNPNSTISKSSDISFSIPDDNIADNKNEGFTTFFGD 221 Query: 248 QGMLTDLLFIALI 260 L + +F ++ Sbjct: 222 SINLLEQIFSKIL 234 >UniRef50_A4X3Y2 Helix-turn-helix protein RpiR n=3 Tax=Actinomycetales RepID=A4X3Y2_SALTO Length = 283 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 96/248 (38%), Gaps = 17/248 (6%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L + +++A L+ Q +LS+ ++A AGVSQ SV +FA LG+ G+PAL+ L Sbjct: 21 RLTPTQRRIAHCLVQQGPAVAYLSAAEVAELAGVSQPSVTRFAMALGHDGYPALRRHLR- 79 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN-SEEKLHECVTMLRS 131 L + P N+ ++ ++ + + +++ +L + Sbjct: 80 ELTAAPRGGRPNPDNE----------LQQAVRAEIENLDRLADQFADRDRVAAAGRVLAA 129 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL----ATVQASSPDDLLLAIS 187 + + + G+ A+ +A FA+ K+ + + D +LL + LLA+ Sbjct: 130 SHPLPVLGLRAAAPLAAYFAYFAAKVLPDVRVLDDGGSLLTDRIEQAAEAGA-TALLALV 188 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHA 247 RE A E G V+ IT + + A L Q + Sbjct: 189 LPRYPREALDALREARTAGLTVVTITDSPVSPAGEHADVVLPAAVGAQLVFDLHTAPMTL 248 Query: 248 QGMLTDLL 255 +L + Sbjct: 249 AMVLLQAI 256 >UniRef50_B0N1U0 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B0N1U0_9FIRM Length = 272 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 36/256 (14%), Positives = 91/256 (35%), Gaps = 27/256 (10%) Query: 20 KLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPE 79 ++A Y+L +S +LA E VS SS+ +F + +G + + LK +++ + Sbjct: 29 RIAKYILENMRALEDISITELAKECYVSNSSISRFCRDIGLRDYNELKSQIAKYQPAHQY 88 Query: 80 SPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTG 139 + + + + + P + E + + +E+ +++ VT + + + G Sbjct: 89 AKNKFYYQSYQKEVPGQSFVEGV----IENLQLLKRTINEKDIYKLVTDIANYSNVAAFG 144 Query: 140 IGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAA 199 S VAQN + L + + + +L++ +S +G Sbjct: 145 YMQSQSVAQNLQYDLQTCHKFIHTSMKYSDQIEYINNADSSNLIIILSESG------TYF 198 Query: 200 DEMLRVGG---------KVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC-HAQG 249 K+ IT + + + + + ++ ++ Sbjct: 199 KRAFERKTLFRNTNDKPKIYLITCNSDIEI-PYVDYYIRYES------INDYASHPYSLA 251 Query: 250 MLTDLLFIALIQQDLE 265 +T ++ ++ LE Sbjct: 252 AITGMICTCYAERYLE 267 >UniRef50_B5I9S2 SIS domain protein n=2 Tax=Aciduliprofundum boonei T469 RepID=B5I9S2_9EURY Length = 178 Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 80/183 (43%), Gaps = 8/183 (4%) Query: 98 VGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKI 157 + + + ++ +LN ++ V M+ A++I + G G SGLV + FA +L+++ Sbjct: 1 MFKDSYEYILESIEKSLNSIDVSLVNHGVDMITEAKQIFVYGSGRSGLVGKFFAMRLVQL 60 Query: 158 GFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTP 217 G A + + + + DL++ IS TG + L + RVG KV+AIT Sbjct: 61 GLVAYFIGETITPV-----VNKGDLVVLISNTGRTQSTLLVESIVKRVGAKVIAITSSAK 115 Query: 218 NALQQRASHCLYTIAEEQATNSASISACH--AQGMLTDLLFIALIQQDLELAPERIRHSE 275 + L + A E++ A + A + D + +L+ + E +R Sbjct: 116 SPLAKHADLTFVIRYEKEKGELAPLGTLFEDAAVVFLDSIISSLMNKLG-QTEEDMRRRH 174 Query: 276 ALV 278 A+ Sbjct: 175 AIW 177 >UniRef50_Q14LK5 Hypothetical transmembrane protein n=1 Tax=Spiroplasma citri RepID=Q14LK5_SPICI Length = 170 Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 79/158 (50%), Gaps = 6/158 (3%) Query: 29 PDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQ 88 P+ + S ++ + G++ S++ + ++K+GY+ F K+ + E + + Sbjct: 5 PEYFLNNSITIISKKLGIATSTISRLSKKVGYRNFKEFKMFIYEKIK------QIKSSFN 58 Query: 89 IRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQ 148 + +D L + +K+ N +++ T+N +L + + ++RI + G+G+S ++ Sbjct: 59 FQYNDNLPNLIQKIKNINLYSVFETINNLDLLELENIINCIFISKRIFIFGVGSSAVICS 118 Query: 149 NFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 L+K+GFN+ +D H L + + + ++L++ Sbjct: 119 ELNNSLIKLGFNSYTSQDFHGQLLFLNSFNDNNLMIFF 156 >UniRef50_C8S7V2 6-phospho 3-hexuloisomerase n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8S7V2_FERPL Length = 189 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 69/154 (44%), Gaps = 7/154 (4%) Query: 97 LVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMK 156 + K + +EE L+E + ++ A+RI + G G SG VA+ FA +LM Sbjct: 4 EMIYKFFDTVKKFIDQIKADINEENLNELINAIQGAKRIFVMGAGRSGFVAKAFAMRLMH 63 Query: 157 IGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRV-GGKVLAITGF 215 +G+N V + +D+L+AIS +G + + + + G K++AITG Sbjct: 64 LGYNVYVVGET-----VTPRIDKEDVLIAISGSGETTSVVNISKKAKEMIGSKLVAITGN 118 Query: 216 TPNALQQRASHCLYTIAEEQATNSASISACHAQG 249 ++L Q + + + + + + + A Sbjct: 119 PNSSLAQMSDVVVLIKGKLKNETNEEL-SQIAPL 151 >UniRef50_Q89R61 Bll2911 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89R61_BRAJA Length = 290 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 94/278 (33%), Gaps = 11/278 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +R L +++ ++ A S + LA AG ++ + A+ +GY Sbjct: 8 SPLSELRIALPSLPMRLQEVGRFVAANDYDATTRSMRDLAAVAGADPAAFTRLAKAIGYS 67 Query: 62 GFPALKLAL--SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ AL+ AL + + + + LV +KL+ E L Sbjct: 68 GWDALRAALTEARRPSQTSPFSGRAKSRRHGPHADVALVTDKLVAEAAG-----LPRIPA 122 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF-NAAAVRDMHALLATVQASS 178 + + E L A+RI + G + VA+ ++L V + A Sbjct: 123 QPIAEAAGALHDAKRIWIAGYRSCRSVAELLNYELRLFRPEQVQLVGASGPDDLDLGAFR 182 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P + ++ I + A R G ++AI + + A H L A Sbjct: 183 PGEAVIVIGFLPYTHASVRVAQAAYRAGATLIAIADSVSAPMAEGADHVLLFEAASSP-- 240 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + + L A +R+ ++EA Sbjct: 241 -GFFPSLTGAIAIAQSLAAVTFSLGGIAAKKRLENTEA 277 >UniRef50_Q0RUQ9 Possible 6-phospho-3-hexuloisomerase n=3 Tax=Rhodococcus RepID=Q0RUQ9_RHOSR Length = 193 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 13/168 (7%) Query: 111 YATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHAL 170 LN + E+ +++ SAR + + G G SGL Q A +LM +G + Sbjct: 24 ERLLNSVAAEQWDRAGSLITSARAVFVIGNGRSGLAVQMAAMRLMHLGLRVHVAGE---- 79 Query: 171 LATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT 230 T A DLL+A+S +G + AAD +VG VLA+T + L +RA L Sbjct: 80 -VTAPAIGDGDLLIAVSGSGTTASVVGAADTANKVGASVLAVTTAPDSPLARRADEVLIL 138 Query: 231 IAEEQATNSASISACHA-------QGMLTDLLFIALIQQDLELAPERI 271 A ++ +SA+I+A +A + D LF AL +++ ER+ Sbjct: 139 PAADKQDHSAAITAQYAGSLFEQSVLLAFDALFQAL-WHNVDQTAERL 185 >UniRef50_C8S1A0 Transcriptional regulator, RpiR family n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1A0_9RHOB Length = 310 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 86/256 (33%), Gaps = 11/256 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + R+ +G +++ LA YLL ++ +A + GVS++SV +F + +GY+ Sbjct: 21 DLRQRLAAAAEGGTPAERALAHYLLSNLSVLPFETAAAVALKVGVSEASVGRFCRSIGYR 80 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 LK +L L + +H+ R + ++ AA+ A + + Sbjct: 81 HLKELKSSLQMDLGEKAWLIGDRLHDFHRRSREGGAELARALEHEIAALVAVYEIAASPA 140 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 V L + + G A A L + A + + P++ Sbjct: 141 FEATVKRLAHRNAVWVAGFQTERGHAAELAHNLQYLRPGVHLADASDGHFAEILLAEPEE 200 Query: 182 L-LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRA----SHCLYTIAEEQA 236 + L+ I R A G V +T A + + Sbjct: 201 VTLVLIDGRRYSRLTRDLAMAAHDAGIPVTLVTD----PYCDWAPGLVTEVFAVPTDLNH 256 Query: 237 T--NSASISACHAQGM 250 ++++S+ + Sbjct: 257 FWDTTSAMSSLIGLMV 272 >UniRef50_C3RMD5 Transcriptional regulator (Fragment) n=2 Tax=Bacteria RepID=C3RMD5_9MOLU Length = 227 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 81/222 (36%) Query: 56 QKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLN 115 +K F K+ L+ L + + I QI+ + V EK+ + T Sbjct: 1 KKFNDGSFSDFKVDLAYELQNMMSKGNNKILFQIKKQETAFSVMEKIASVEKDTIDRTKL 60 Query: 116 VNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQ 175 + + +++ ++ A I + G + + F + + +IG D + Sbjct: 61 LLNYQQIERITKLINKATIIYIFADGINEQIGHEFKYMMARIGKAVEIATDNFWVALNCL 120 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 + S + L + +++ +L ++ +A+TG+ + + + Sbjct: 121 SESANPLAIYVNHREHNVQLLEKIRLNHKIAIPGIAVTGYINSTFETCCKEVITIPTGVS 180 Query: 236 ATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 ++ A + A + + L +I + EL+ +++ L Sbjct: 181 YSDLAPVIYTTAIRYVLNTLVGCVIASNHELSMDKLIDYTEL 222 >UniRef50_B0N5S7 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0N5S7_9FIRM Length = 263 Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 85/245 (34%), Gaps = 23/245 (9%) Query: 21 LADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPES 80 +A YL+ + LS +LA VS S V +F + LG + F K AL + + Sbjct: 30 IAKYLIANHENINSLSISELAKNTNVSISQVSRFVRSLGIESFSDFKEAL---VYHGEQK 86 Query: 81 PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGI 140 + +I V +K++ E E ++ + V +I + GI Sbjct: 87 RHTGLQREIID----YRVYQKMVTEEITYF---YQNFDESRVDKLVYDFYKYPKIAIFGI 139 Query: 141 GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGV------RRE 194 S A+ + L+ G + + L ++++ + L++ S++G Sbjct: 140 LNSDNGAKELQYNLIGWGKICISYTNFQDQLDFIKSADSNTLIVIFSFSGNYVMKNGYSR 199 Query: 195 LNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDL 254 D + KV IT + + + + N L DL Sbjct: 200 FYHTYDYLKSSKAKVYVITKNNLVQELEYVNEVILVPIKHDLYNYT-------LQCLVDL 252 Query: 255 LFIAL 259 +F+ Sbjct: 253 IFMKY 257 >UniRef50_C6A1J9 Bifunctional D-arabino 3-hexulose-6-phosphate formaldehyde lyase/phosphohexuloisomerase n=7 Tax=Thermococcaceae RepID=C6A1J9_THESM Length = 406 Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats. Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 5/145 (3%) Query: 101 KLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFN 160 K+I++ T + E++ V + A +I + G G SGLV + FA +LM + FN Sbjct: 217 KVIQDITDHIKTVATSLKLEQVRGMVDAMIGANKIFIYGAGRSGLVGKAFAMRLMHLDFN 276 Query: 161 AAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNAL 220 V + A DLL+AIS +G R + AA+ GGKV+ IT + + L Sbjct: 277 VYVVGET-----ITPAFEEGDLLIAISGSGETRTIVDAAEIAKNQGGKVVGITSYKNSTL 331 Query: 221 QQRASHCLYTIAEEQATNSASISAC 245 + + + +A A Sbjct: 332 GKLSDVVVEIPGRTKADIPTDYIAR 356 >UniRef50_Q2NVC3 Putative uncharacterized protein n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NVC3_SODGM Length = 207 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 66/178 (37%), Gaps = 3/178 (1%) Query: 58 LGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 +G+ GF L+ AL L+ + P + L + E ++ ++ +L Sbjct: 1 MGFSGFVELQQALRAELSWRSNGPLQLLDRHQTAGGHLEAM-ETSLQATCDSISQSLRQI 59 Query: 118 SEEKLHECVTMLRSA-RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQ 175 + + + +L + +R+ L G S +A L ++ + + H + V Sbjct: 60 PAFDIQQAIALLGQSGKRVTLGGRRFSQSLAIYLERHLRQLRPQVMLLPEVPHQRILPVV 119 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE 233 + D+ + + +R + A ++ G ++ +T + L A L A Sbjct: 120 DAGRQDIFVLFDFRRYQRNMVELAQQVTERGAALILVTDSHLSPLAAHAQVVLPVQAN 177 >UniRef50_D1S1T7 Transcriptional regulator, RpiR family n=3 Tax=Actinomycetales RepID=D1S1T7_9ACTO Length = 281 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 94/248 (37%), Gaps = 18/248 (7%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L + +++A L+ A +LS+ ++A AGVSQ SV +FA LG+ G+PAL+ L E Sbjct: 20 RLTPTQRRIAHCLVRHAGAAAYLSAAEVAELAGVSQPSVTRFAMALGHDGYPALRRRLRE 79 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN-SEEKLHECVTMLRS 131 + P+ ++ + + ++ E +L + Sbjct: 80 LTVTGSAGPAA------------GNALQRAVHAERDNLDRLAAQLADAGRVAEVGKLLAA 127 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLA----TVQASSPDDLLLAIS 187 +R + + G+ A+ +A FA+ K+ + + D ++L A+ +LA Sbjct: 128 SRPLPVLGLRAAAPLAAYFAYFAAKVHPDVRVLDDGGSMLVDRLDQAVAAGA-TAMLAFV 186 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHA 247 RE A E G V+AIT + + A L + Sbjct: 187 LPRYPRETLDALREARDAGLTVVAITDSPVSPATEHAEVVLPAAVGADLVFDLHTAPMTL 246 Query: 248 QGMLTDLL 255 ++ + Sbjct: 247 AMVVLQAI 254 >UniRef50_B5H4P8 Predicted protein n=4 Tax=Streptomyces RepID=B5H4P8_STRPR Length = 304 Score = 108 bits (272), Expect = 1e-22, Method: Composition-based stats. Identities = 55/244 (22%), Positives = 101/244 (41%), Gaps = 4/244 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQP-DTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 +R ++ L+ +++ +A YL+ P + S+Q+L +G S ++VV+ Q+LGY Sbjct: 17 LRATVRDQWDELSAAERTVAQYLVSAPAEQVMFASAQELGTASGTSNATVVRALQRLGYA 76 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G PALK L+ S L+ + + E + + + Sbjct: 77 GLPALKRELAADFTSALAPEVRLKQRIAHVGQDLQTIWNDVFDETQDRIDQCRRLTGADA 136 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLAT-VQASSPD 180 L + V L AR ++ G+ A L A++ A L +IG A V LA + + + Sbjct: 137 LQQAVAALADAREVLCYGVAACELAARHLALALGRIGRRARFVGATGFALADPLLSLAQG 196 Query: 181 DLLLAISYTGV-RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D ++ G EL + + VG KV+ +T A ++R L + Sbjct: 197 DTVVIF-QPGRPLSELTVLVERARSVGAKVVFVTDELGEAFEERVDAILTAPHTPTGITN 255 Query: 240 ASIS 243 +++ Sbjct: 256 EALT 259 >UniRef50_C9D0H7 Putative transcriptional regulator RpiR family protein n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9D0H7_9RHOB Length = 319 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 52/246 (21%), Positives = 91/246 (36%), Gaps = 14/246 (5%) Query: 40 LANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVG 99 +A +AGVS+ +V +F ++LGYKG LK AL + S PS+ G Sbjct: 79 VAAKAGVSEITVSRFLKRLGYKGISGLKEALRTEMTSALLEPSLRSERLKEGS------L 132 Query: 100 EKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF 159 + ++ A E + L ARR+ +TG VA++FA +L + Sbjct: 133 SGFLTSEAESLLALAQQMETENWTRMIATLDQARRVYVTGFQTVSGVAEDFAKRLNIVRS 192 Query: 160 NAAAVRDMHALLATVQASSPD----DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGF 215 + V L + D D+L+ + RE + + G V+ IT Sbjct: 193 SVHFVSANSGGLVEWVDAGRDDYRQDVLIVVDIVPFAREAIQISRLAQKTGMTVVVITDE 252 Query: 216 TPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 N + + + + L + + A+ Q+D E R + Sbjct: 253 FNNWAYDYTDYVFHGRTKTGLF----LETTAPLVTLQNFIVHAVAQKDPERTQHRRAEWQ 308 Query: 276 ALVKKL 281 + + +L Sbjct: 309 SYLSEL 314 >UniRef50_C9AU51 Predicted protein n=2 Tax=Enterococcus casseliflavus RepID=C9AU51_ENTCA Length = 268 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 39/247 (15%), Positives = 89/247 (36%), Gaps = 15/247 (6%) Query: 18 DKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQ 77 + +LA + L + + Q+A E VS++S+ +FA++LGY+ F +K + Sbjct: 25 EFELAKFFLENFKSVTRWNIYQIAEEQHVSRASIRRFAKQLGYENFLDMK---------K 75 Query: 78 PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIIL 137 N+ KL T+ M + +++ V ++ +R +++ Sbjct: 76 NAETFDDGINEFLRFYGYPNFLTKLQDNITSLMEELSLRFNTQEVDRLVRLINDSREVMI 135 Query: 138 TGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNL 197 + F +++ G + L ++ D L++ S +G+ ++ Sbjct: 136 LCSSNITGSVKTFQQRMVIFGKRITLLTSKSDLTLALEH-YQDPLIIVFSLSGL--FVSS 192 Query: 198 AADEMLRVGGKVLAITGFTPNALQQRAS--HCLYTIAEEQATNSASISACHAQGMLTDLL 255 + + V + T + + L + E+ N + DLL Sbjct: 193 MLEILKEVKAPTILFTNNRNPIYNRYFDKLYHLSSQTHEKEINELLYYTY-GIDFVLDLL 251 Query: 256 FIALIQQ 262 F + + Sbjct: 252 FNGYLLK 258 >UniRef50_B0VH11 Carbohydrate isomerase, KpsF/GutQ family n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VH11_9BACT Length = 322 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 73/173 (42%), Gaps = 3/173 (1%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAW 152 + ++ + + A+ S+E L + +L + +++LTG+G +G++A+ + Sbjct: 2 NIYETVQEELAKEATAIQKVAKQLSKESLEKAFDLLCKCKGKVVLTGMGKTGIIARKISA 61 Query: 153 KLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAI 212 L G + + + + D+++A+S +G +EL + ++AI Sbjct: 62 TLASTGTTSIFLHAAEGIHGDLGMIESGDVVIAVSNSGNTQELINLIPFLKFNYVPIIAI 121 Query: 213 TGFTPNALQQRASHCL--YTIAEEQATNSASISACHAQGMLTDLLFIALIQQD 263 TG + L + + L + E + ++ + D L IAL++ Sbjct: 122 TGEPNSQLAKNSDVVLNCHIPKELEPLGLVPTASTTVALAVGDALAIALLKHK 174 >UniRef50_C2BZN1 RpiR family transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2BZN1_LISGR Length = 185 Score = 107 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 59/156 (37%), Gaps = 15/156 (9%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 L ++D + ++L + ++ ++LA S +S+++F +K GF K L Sbjct: 8 PKLNETDIAIYRFILNNLEITSFMNVRELAERTHTSTASIIRFCKKFQCAGFSDFKAKLR 67 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 I + L + M T ++K+ E +L S Sbjct: 68 LY---------------IDKAESLNETADLDESLIINFMQRTTEKIYQQKIAEVAKLLAS 112 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM 167 I L GIG+S + A+ A I + ++++ Sbjct: 113 KELIFLIGIGSSKVTAEYGALYFSSIFNMSVSIQNP 148 >UniRef50_Q47334 Polysialic acid capsule expression protein kpsF n=23 Tax=Escherichia RepID=KPSF5_ECOLX Length = 327 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 73/184 (39%), Gaps = 10/184 (5%) Query: 91 GDDPLRLV-------GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGA 142 DD + + + E +AA+ + + ++ + + +IL+G+G Sbjct: 7 PDDQSSTIDPYLITSVRQTLAEQSAALQNLSKQLDSGQYQRVLNLIMNCKGHVILSGMGK 66 Query: 143 SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEM 202 SG V + + L G + + A + +P DLL+ IS +G E+ + Sbjct: 67 SGHVGRKMSATLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSL 126 Query: 203 LRVGGKVLAITGFTPNALQQRASHC--LYTIAEEQATNSASISACHAQGMLTDLLFIALI 260 G +++AIT + L + A L+ E N A ++ + D L IA+I Sbjct: 127 KNFGNRIIAITNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMI 186 Query: 261 QQDL 264 Q Sbjct: 187 HQRK 190 >UniRef50_C3WG43 SIS domain-containing protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WG43_FUSMR Length = 241 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 86/233 (36%), Gaps = 31/233 (13%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 + ++ ++Y L +S++ Y++ + + + + +A S S V+ A+KLGYKGF Sbjct: 9 IYKLGEKYH-LTESEELALKYIVNNFEKSLEIGVRGVAKNCFASTSVVMNLAKKLGYKGF 67 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 + L ++ + + + + +EKL Sbjct: 68 VDMVYRLEFSIKNSLSNSNSLNNY--------------------------CTNLDDEKLK 101 Query: 124 ECVTMLRSARR-IILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 ++ + R I + G G SG V + A KLM +G+ + + Sbjct: 102 YFKNLISNTTRPIFIHGTGFSGAVTKYMADKLMVLGY---YSSRSEYMETMEPKYHQKAI 158 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 LL +S +G ++ + ++ ++ TG + + L+ A Sbjct: 159 LLVVSKSGETSQIIMLCEKANLRNVPIVLFTGTSNSTLENLADLTFIIKDSNP 211 >UniRef50_A0P1C3 SIS domain protein n=2 Tax=Rhodobacteraceae RepID=A0P1C3_9RHOB Length = 289 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 51/283 (18%), Positives = 101/283 (35%), Gaps = 16/283 (5%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L R++ L + + +LA ++ L + + + LA +AGVS+ +V + ++LG G Sbjct: 16 FLKRLQDETPKLPKQEARLAQFVSLNISSLGLETGKSLAEKAGVSEVTVGRLLRRLGCDG 75 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 LK L E + S IR + ++ + N Sbjct: 76 MKGLKQLLREHYSVTTASFVTDGDIPIRFVET--------LEAEVQGLTNVFNQTQGGNW 127 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHAL----LATVQASS 178 E +L A I TG + ++FA +L N + ++ L S+ Sbjct: 128 DEVTRLLSDAETIFATGFQSIRGTVEDFARRLALARKNVHFLSAHDSMLGEWLDQSPQSA 187 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 L+ + E A G V+ ++ + ++ A +Y + Sbjct: 188 ASSCLILVDVVPYASESVKLARLAKSQGRSVIVVSDEYCHWSREIADAAIYAPSRTGLFL 247 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++I A ++ D+ + + + R+ +A KKL Sbjct: 248 ESTIGIVAALSLMVDV----AARANETASAHRLVQWKANSKKL 286 >UniRef50_D2RHI3 6-phospho 3-hexuloisomerase n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RHI3_ARCPR Length = 212 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 39/181 (21%), Positives = 78/181 (43%), Gaps = 10/181 (5%) Query: 101 KLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFN 160 + + + + + +K+ E ++ L +AR I + G G SG VA+ FA +LM +G+N Sbjct: 31 RFLDKVCEHVQNIKSNLDFKKIEEFISALENARCIFVMGAGRSGFVAKAFAMRLMHLGYN 90 Query: 161 AAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLR-VGGKVLAITGFTPNA 219 V + P+DLL+AIS +G + + +G K++AIT + Sbjct: 91 VYVVGET-----VTPRIKPEDLLIAISGSGETLSVVNISRRAKEDIGSKLVAITQRPEST 145 Query: 220 LQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 L + + + +++ + + + A LF L+ I + + L + Sbjct: 146 LAKMSDIVIVLKGKDKYERNHEL-SKLAPLG---TLFELTALIFLDGLVAEIMNLKQLTE 201 Query: 280 K 280 + Sbjct: 202 E 202 >UniRef50_C3RLV2 Predicted protein n=2 Tax=Bacteria RepID=C3RLV2_9MOLU Length = 261 Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 93/249 (37%), Gaps = 9/249 (3%) Query: 15 AQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEAL 74 +D +A ++ + + LS +++A EA +S +SV +F K G++ F A K E Sbjct: 18 NSNDYNIARTIINHIEDIKILSLEKIAEEANISPASVSRFINKAGFESFQAFKYEF-ELF 76 Query: 75 ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARR 134 + + H Q + + E L + A + T +KL E V +L++++ Sbjct: 77 TRDVKMRRIISHTQRFMRTTIENMSESLYVDGLANLRQTKLNLDIDKLKEIVKLLKTSKS 136 Query: 135 IILTGIGASGLVAQN--FAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGV- 191 + IG S +A +++ A + + +D ++ I Sbjct: 137 VTF--IGDSHELADFYTLQLEMLVNDIPAYLINFYEFEKMYLNQLDHNDTIVFIGVYKEW 194 Query: 192 -RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGM 250 D K++A L++ A LY + N S + + Sbjct: 195 FSDAQKEILDYAKERKIKIIAFVQEED-YLKEYADL-LYVYGIPDSYNDGYYSLPYLNRL 252 Query: 251 LTDLLFIAL 259 L ++++ L Sbjct: 253 LCEMIYFKL 261 >UniRef50_A1WQC0 Transcriptional regulator, RpiR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WQC0_VEREI Length = 326 Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 92/260 (35%), Gaps = 8/260 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + I +R + Q ++++A YL PD +S +A A VS +V +F +KLG+ Sbjct: 46 DFQTLIAERQSTMTQLEQRVAVYLRSNPDAILVDTSNTIAERAFVSPMTVTRFFRKLGFD 105 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 A+K A+ + ASQ S +Q + L + K+ A+ S Sbjct: 106 SAAAVKKAVRQRFASQVPSAIGSRFDQFQRQRTLLDKNGDV-KDAVTAIRQAAQYRSTPM 164 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLA--TVQASSP 179 V ++ + + G +A +L I N + + A S+ Sbjct: 165 WARIVELIAHSDSVFAAGFQTMSYLANGLVSRLNYIRANVHELDGADGVYAPFFADRSAR 224 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 L + I + R + A G +V+ N + + +E Sbjct: 225 RTL-IIIDHFRYGRNGPVLAKVAREQGAEVIIFCDEHCNWAAGITAFVVTLPSEPGFFFR 283 Query: 240 ASISACHAQGM----LTDLL 255 +++ M + D+L Sbjct: 284 PTMALHFCMHMLVQDVIDML 303 >UniRef50_Q14PH5 Conserved hypothetical containing isomerase domain pd087191 and transcriptional regulator domain pd245556 transcription regulator protein n=1 Tax=Spiroplasma citri RepID=Q14PH5_SPICI Length = 192 Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 46/184 (25%), Positives = 69/184 (37%), Gaps = 3/184 (1%) Query: 100 EKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF 159 E + + K+ E VT+L+ A+ I L G+G S L + A +L GF Sbjct: 7 ENIFLYYQDMLERNQQTFDNVKVLETVTLLKKAKVIYLAGLGISSLAVKELATRLFSFGF 66 Query: 160 NAAAV-RDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPN 218 + + + ++ PDDLL+ IS G + AA E G V+ IT + Sbjct: 67 TCSLLMENESNIITRASLIQPDDLLICISLEGKTMAVIAAAKEAKNNGVNVIGITSKYNS 126 Query: 219 ALQQRASH-CLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLE-LAPERIRHSEA 276 L + + N ISA D L L+ D E E S Sbjct: 127 DLSKYTDIMHTIISSTLYEKNEIFISALLPLIYWNDNLIKTLLSVDKEHQYLENRIKSNK 186 Query: 277 LVKK 280 ++KK Sbjct: 187 ILKK 190 >UniRef50_B5XTC8 Transcriptional regulator, RpiR family n=6 Tax=Enterobacteriaceae RepID=B5XTC8_KLEP3 Length = 240 Score = 106 bits (266), Expect = 7e-22, Method: Composition-based stats. Identities = 42/241 (17%), Positives = 81/241 (33%), Gaps = 33/241 (13%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ R L++++ + ++ P+ + +A + + SS+V+ A+KL + Sbjct: 1 MDLENIFRDV--KLSKTEMTVLRFIQNDPEQCIRQGVRAVAEQCYSNPSSLVRLAKKLKF 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ L + + P + + N I A+ L ++ Sbjct: 59 SGWLELVYFIKFNITM----PKLDVTNDIDYMSVQPE----------EALTLLLASLKQQ 104 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAA--AVRDMHALLATVQASS 178 RI++ G G S L+AQ K + G NA+ D L A Sbjct: 105 -------------RILIHGSGFSQLIAQYIYNKFLVTGVNASLALWPDYEILEQKNAACF 151 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D + IS +G + ++ TG + L Q A ++ + Sbjct: 152 --DSIWIISKSGRSSSALNWVKALEGKEINLVCFTGDYQSPLAQAADTAFIIHDPQKFDD 209 Query: 239 S 239 Sbjct: 210 D 210 >UniRef50_O28478 Uncharacterized protein AF_1796 n=1 Tax=Archaeoglobus fulgidus RepID=Y1796_ARCFU Length = 183 Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 36/172 (20%), Positives = 73/172 (42%), Gaps = 15/172 (8%) Query: 101 KLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFN 160 + ++ + + N E + E + ++ SAR I + G G SG +A+ FA +LM +G+ Sbjct: 3 RFLEVVSEHIKNLRNHIDLETVGEMIKLIDSARSIFVIGAGRSGYIAKAFAMRLMHLGYT 62 Query: 161 AAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNAL 220 V + + D+L+AIS +G + + + +G K++A+TG ++L Sbjct: 63 VYVVGET-----VTPRITDQDVLVAISGSGETTSVVNISKKAKDIGSKLVAVTGKRDSSL 117 Query: 221 QQRASHCLYTIAEEQATNSASISACHAQ---------GMLTDLLFIALIQQD 263 + A + + + I + A + D L ++ Q Sbjct: 118 AKMADVVMVVKGKMKQERDE-ILSQLAPLGTMFELTAMIFLDALVAEIMMQK 168 >UniRef50_C7LLH6 SIS domain protein n=3 Tax=Mycoplasma mycoides group RepID=C7LLH6_MYCML Length = 271 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 78/217 (35%), Gaps = 14/217 (6%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + +I+Q L+ + K+ DY+L + S + + + V S + K KL Sbjct: 1 MNIIEKIKQNKINLSPQELKVCDYILTNISDYHNFSVKSICKKLNVQPSVITKTLVKLEI 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G L L + + + ++ ++ Sbjct: 61 GGLKQLISYL----------ENNSNFFKDETKVSFDNIIDEFENRLEDSLKQLKTNLDIN 110 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L E V + S+++IIL G + ++A ++L+++ + + + Sbjct: 111 YLKEVVCKILSSKKIILFCTGKTKILANFLFFQLLELNLSVELFS--NLFDSRAYNV-EQ 167 Query: 181 DLLLAISYTGVRRELNLAADEMLRVG-GKVLAITGFT 216 ++ IS +G ++N + + + ++ IT Sbjct: 168 ACIIVISTSGNNSKINRYLNFISKRKPNTIIGITSSP 204 >UniRef50_C6JMB7 Polysialic acid capsule expression protein kpsF n=2 Tax=Fusobacterium RepID=C6JMB7_FUSVA Length = 324 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 80/177 (45%), Gaps = 4/177 (2%) Query: 90 RGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQ 148 + + +++ + + + E + V + + ++++TGIG SGL+ + Sbjct: 2 TKEMDIINYAKEVFDSEIEELKIVRDKINREIIE-VVEEILKSEGKVVVTGIGKSGLIGK 60 Query: 149 NFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGK 208 A L G ++ + L + S +D+++AIS +G E+ + ++G K Sbjct: 61 KIAATLASTGTHSVFMNSAEGLHGDLGMISKEDVVIAISNSGNSDEIVAILPSIKKIGAK 120 Query: 209 VLAITGFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQD 263 ++A+TG + L + A + L + + N A +S+ + ++ D L LI++ Sbjct: 121 IVAMTGNRNSKLGREADYILNIGVKREGCPLNLAPMSSTTSTLVMGDALAAILIKKR 177 >UniRef50_C1RI47 Transcriptional regulator n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RI47_9CELL Length = 296 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 84/225 (37%), Gaps = 13/225 (5%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R+ RY L ++K AD LL S+ +LA AGVS++++ + + LG+ Sbjct: 21 LDERVAARYAELPPQERKGADVLLEHFGDLATYSAAELAALAGVSKATMSRLFRSLGFDD 80 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F ++ L A + + + + D + + A L Sbjct: 81 FSQVRDHLR---ALRQHGLPLGLGDAPDLDAHVEAEAAAVRVAVAAL---------AVHL 128 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSPDD 181 +L A R+++ G+ S +A + +L ++ + A V L + SP D Sbjct: 129 DPVADLLAHAPRVVVVGLRTSYPLALHLRQQLAQVRPHVALVPQPGQSLAEDLVDLSPQD 188 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASH 226 ++ ++ + + G V+ + T AL A+ Sbjct: 189 AVVLVALRRRPPGVRALVARLAEAGTPVVLLADPTARALAAHATW 233 >UniRef50_A5V7B7 Transcriptional regulator, RpiR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V7B7_SPHWW Length = 309 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 49/286 (17%), Positives = 100/286 (34%), Gaps = 25/286 (8%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L R++ G +++ +A +++ T +++ LA + GVS+ ++ +FA+KLG++ Sbjct: 20 LLRRLQAGLDGYTAAERAVAGHIVAHYGTLAFETAESLATKVGVSEITIGRFARKLGFRN 79 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F ALK L +A + + + A+ A + Sbjct: 80 FKALKNELKDATVQAMPWLIGEELAEFVESPGEPSDRDGNRQREMNALLAVYRLAETPGW 139 Query: 123 HECVTMLRSARRIILTGI----GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 +L AR + + G G + L+A + M+ G + + + Sbjct: 140 AAAARLLAQARTVQIAGFQTERGIATLLANHLQ--FMRDGVRLVDLGAGNYADIFATD-T 196 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRAS-------HCLYTI 231 D L+ I R+ L A++ + G ++ +T H L Sbjct: 197 SDTCLVVIDIRRYSRQSYLVAEQASQQGIPLIVLTDL-------FCDWAQRFTPHVLAVP 249 Query: 232 AEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + S+ A +LL +I+ +R+ L Sbjct: 250 TQTGLFW----SSPVALVCAANLLVNDVIKLIGPGVEQRLEQLTRL 291 >UniRef50_C1I4S5 Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I4S5_9CLOT Length = 270 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 81/220 (36%), Gaps = 9/220 (4%) Query: 15 AQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEAL 74 + + +A+ LL D+ ++++ ++A+ VS+S++ KF + +G+ F LK + + Sbjct: 19 SSTYYHIANILLCNYDSIQNMTISEVADLCFVSKSTISKFTRHIGFDDFLELKA--AASY 76 Query: 75 ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARR 134 S S + ++ I G E+ + + + K+ E L + Sbjct: 77 RSNKSSNYLNYNDNIIGFMENHT-KEEYVDTIINDLELIKSNIDMNKIEELAKDLIKYDK 135 Query: 135 IILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRE 194 + G+ S A +F KL G + ++ + D L++ + +G + Sbjct: 136 VAAFGLLYSESAAMDFQTKLAYNGKYIISHMHDIKQDEFIKNAKEDTLIIIFTNSGNYIK 195 Query: 195 LNLAAD------EMLRVGGKVLAITGFTPNALQQRASHCL 228 + K++ IT C+ Sbjct: 196 KYQMMQGNINKNVFKQTKAKIVVITANRNMENHPYVDLCI 235 >UniRef50_C1TKE5 KpsF/GutQ family protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TKE5_9BACT Length = 335 Score = 105 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 74/177 (41%), Gaps = 4/177 (2%) Query: 88 QIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLV 146 + D+ L +G +++ E + + E L + +++ R R++++G+G SG + Sbjct: 11 PVFDDEKLVEIGRQVLLEEAEEIKKAASRMGPE-LAKAARIVQGCRGRLVISGLGKSGHI 69 Query: 147 AQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVG 206 + A L +G + + A + +D+ IS++G E+ R+G Sbjct: 70 GRKIAATLASLGTPSFFLHAAEAAHGDLGMVRREDVAFLISHSGTTSEVVKLIPFFRRLG 129 Query: 207 GKVLAITGFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQ 261 V+A+TG + L + A L E N A S+ Q + D L + + Sbjct: 130 APVIALTGSLESPLAKGADVILNASVEREADPLNLAPTSSTTVQLAIGDALAGVVTE 186 >UniRef50_C5D0V0 Transcriptional regulator, RpiR family n=1 Tax=Variovorax paradoxus S110 RepID=C5D0V0_VARPS Length = 288 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 49/282 (17%), Positives = 99/282 (35%), Gaps = 6/282 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + RI + +S++ LA YL ++ +A ++GVS +V +F + LGY Sbjct: 6 SLFERIEAASSEMTRSERLLAAYLTANARELTLENAASVARKSGVSPMTVGRFLRTLGYD 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F ++ S A + R P+ + + A+ A ++ + E Sbjct: 66 SFDEVRRETSRLSAPAELRIAGRFEQFSRSQGPVSDARSAQLTQQIDALVAAHDLATGEH 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL-ATVQASSPD 180 + V + +++R+ + G VA +FA +L + + + A Sbjct: 126 WNAMVRQVATSQRVFVAGYQTVRGVASDFAARLEYVREGVKFLDGADGTYAELLGALKSQ 185 Query: 181 D-LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 L+ + ++ A G V IT + + H + + Sbjct: 186 TRCLVLVDIRRYAKQAEALASAATEAGIPVFVITDAYCHWARTYTPHVFHVQTDVGFFWD 245 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + A +LL +I+Q + ER+ E L + Sbjct: 246 ----STVAIVGFINLLMNGVIEQLGKKVGERVSRLEKLQDRF 283 >UniRef50_C6VIW0 Transcription regulator n=3 Tax=Lactobacillus plantarum RepID=C6VIW0_LACPJ Length = 152 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 58/144 (40%), Gaps = 1/144 (0%) Query: 137 LTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELN 196 L G S L A++F KL+KI A + + +P D + ISY G Sbjct: 2 LFSQGDSQLRARSFQNKLVKINRFAQIAEMYADEAWNIASLTPQDCAMFISYAGNTDVHQ 61 Query: 197 LAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-NSASISACHAQGMLTDLL 255 A V+ +TG + LQQ A++ L E+ + ++ + + D L Sbjct: 62 RFAKYCQAHHIPVIVLTGNVDSPLQQFATYQLVITQNERNNAKLGTFASQVSFDYVLDTL 121 Query: 256 FIALIQQDLELAPERIRHSEALVK 279 F + + + ++ ++ L++ Sbjct: 122 FAIMYANNFQTNLAHLKTTQLLIQ 145 >UniRef50_C3RJC2 Predicted protein n=2 Tax=Bacteria RepID=C3RJC2_9MOLU Length = 257 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 72/186 (38%), Gaps = 10/186 (5%) Query: 20 KLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPE 79 ++A Y+L + ++L +++A E V+ SS+ +F +++G + F LK L + Sbjct: 25 QIAAYILNHLEEVQNLGIKEIAKECNVAVSSISRFCKEVGLRDFAELK-----ELLLSTD 79 Query: 80 SPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTG 139 + L K+ ++ + + + + +++ + G Sbjct: 80 LSFEDHSHATSKQARLHDYSHKV----RESIIMVEKSIDMDAVIDLCKDINEYQKVAIFG 135 Query: 140 IGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAA 199 + +G VA N L+ + + + A+ DDL++ SYTG + Sbjct: 136 LLKAGAVAFNLQGDLLMLNKQVYTNISYSQQIQYIVAADEDDLIIIFSYTGAYFDYQD-L 194 Query: 200 DEMLRV 205 + + Sbjct: 195 RALKKR 200 >UniRef50_A1SXE5 DNA-binding helix-turn-helix domain-containing transcriptional regulator protein n=2 Tax=Gammaproteobacteria RepID=A1SXE5_PSYIN Length = 272 Score = 103 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 13/152 (8%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 RI + Y L ++D++LADYL + P+ LS+ ++A VS++SV +F +KLGY+ Sbjct: 10 ERITKNYAQLTKNDQRLADYLQINPEKILILSTNEIAEACLVSKTSVSRFIRKLGYEDH- 68 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 LAL L + + + + ++ ++ S L + Sbjct: 69 ---LALRNELLAARDKGEPLSVTALEDSE---------FRQEVHSLEQLWAQLSGMNLEQ 116 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMK 156 + + +A+R+ + G S +A +F +LM+ Sbjct: 117 LIKKIATAKRVKIIGYRNSYPLALHFRQQLMQ 148 >UniRef50_C9AU43 Putative uncharacterized protein n=3 Tax=Enterococcus RepID=C9AU43_ENTCA Length = 207 Score = 103 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 67/160 (41%), Gaps = 6/160 (3%) Query: 119 EEKLHECVTMLRSA----RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATV 174 +++ + ++ A +R+ +TG+G VA A +G A + + + Sbjct: 31 YQQMVKAKELILHAEKNHKRVHVTGVGKCSYVAGYAASLFSSVGTPAYFLDTTETVHGSA 90 Query: 175 QASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL--YTIA 232 D+++AIS +G +EL A + G +LA+TG ++L A L Y Sbjct: 91 GQVVAGDVVIAISNSGNTKELEYALAALKANGAVILAVTGNEDSSLASCAEVTLSSYVSQ 150 Query: 233 EEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIR 272 E + N S+ AQ + +L + L + + ++ Sbjct: 151 EGDSLNKPPRSSVIAQMIQLQVLSVLLQEAKEINLEDYLK 190 >UniRef50_A9EFQ3 SIS domain protein n=2 Tax=Rhodobacteraceae RepID=A9EFQ3_9RHOB Length = 282 Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 37/251 (14%), Positives = 78/251 (31%), Gaps = 6/251 (2%) Query: 32 ARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRG 91 ++ +A VS+++V +F + +GY F LK L + P S + + Sbjct: 8 LPFETAASIARSVKVSEATVGRFCRSIGYDSFRDLKDHLKHDMGDDPWLMSDRLQEMRKD 67 Query: 92 DDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFA 151 + ++ AA+ + + + + L + + G +AQ FA Sbjct: 68 GGVDSAQLNQGLQLEIAALVGIYELANSAEWQQEAERLAQTAHVFVAGFQTERGLAQYFA 127 Query: 152 WKLMKIGFNAAAVR-DMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVL 210 ++ + + + P L++ A+E G V Sbjct: 128 NQMQYVRDGVTLIDLAAGNFAEILLTDRPAHLVI-FEARRYSVLAKSLAEEARAAGVTVT 186 Query: 211 AITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPER 270 IT + + A + + +A A +LL ++ Q R Sbjct: 187 LITDVFCDWGHEAADQVFAVPTQFNQFWDS--TAQMASLS--NLLIHSVFLQLGSEVEGR 242 Query: 271 IRHSEALVKKL 281 + L + Sbjct: 243 LNRIADLYGRF 253 >UniRef50_C1A8V3 Arabinose 5-phosphate isomerase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8V3_GEMAT Length = 323 Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 82/183 (44%), Gaps = 4/183 (2%) Query: 90 RGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQ 148 + G +++ A+ A+ ++ V +L R R+I+ G+G SGLVA+ Sbjct: 4 SDTTTILERGRRVLALEAEALRASETAL-GDEFVHAVQLLTECRGRVIVAGVGKSGLVAR 62 Query: 149 NFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGK 208 A G A + + ++ + PDD+ + IS +G EL + + R+G + Sbjct: 63 KMAATFTSTGTPAMFLHPVESVHGDLGIVGPDDVAILISKSGESDELLGLIEALARLGVR 122 Query: 209 VLAITGFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQDLEL 266 ++A+T + L + A L + +E+ + A ++ L D L +A++QQ Sbjct: 123 MIAMTAVAGSRLARHADVTLDLLVKEEACPHDLAPTTSTTVTMALGDALAVAVLQQKGFR 182 Query: 267 APE 269 A + Sbjct: 183 AED 185 >UniRef50_Q0C3E7 Sugar isomerase, KpsF/GutQ family n=2 Tax=Alphaproteobacteria RepID=Q0C3E7_HYPNA Length = 342 Score = 103 bits (257), Expect = 8e-21, Method: Composition-based stats. Identities = 37/173 (21%), Positives = 62/173 (35%), Gaps = 2/173 (1%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWK 153 + +I+ A+ T+L + R +I+ G+G SG + Q A Sbjct: 26 SDLDLARNVIRTERNALEKLEQTLGPSLEEAVSTILATDRHVIVAGVGKSGHIGQKIAAS 85 Query: 154 LMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 L G + + A + P +++AISY+G REL ++A+T Sbjct: 86 LASTGTPSFFLHPTEASHGDLGMIVPGSVVIAISYSGESRELIDLLRYCKSNAIPLIAMT 145 Query: 214 GFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDL 264 + L + A L E A S+ L D L I L+ + Sbjct: 146 RARESTLGRYADVLLELPTVPEACPNGLAPTSSTTMALALGDALTIVLMARRG 198 >UniRef50_C7M027 Transcriptional regulator, RpiR family n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M027_ACIFD Length = 282 Score = 103 bits (257), Expect = 9e-21, Method: Composition-based stats. Identities = 51/275 (18%), Positives = 89/275 (32%), Gaps = 20/275 (7%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 L +++ + D A SS +LA AGVSQ SV + A LG+ +P L+ AL Sbjct: 18 NRLTPVQRRIVQTIAEHLDDADTFSSAELAAIAGVSQPSVTRLASALGFASYPELRQALR 77 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN-SEEKLHECVTMLR 130 + + D+ A + SE L E L Sbjct: 78 ALVRDDSQPVESTPRLDAVRDE-------------IANLTWMERQLTSEPLLAEAGRRLA 124 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATV---QASSPDDLLLAIS 187 + +++ G+ AS +A ++ K+ V + + + L ++ Sbjct: 125 GSVPLLVIGLRASAPLAAYLSFYARKVHPAVITVDRAGSEGIDAIAEAHARGANAALVLA 184 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHA 247 REL + +G ++ I +Q RA L SA Sbjct: 185 LPRWPRELLTLVEVAGDLGIDLVTIADRAHGPIQARARVSLVAPVGTSLLYDTHASAFVL 244 Query: 248 QGMLTDLLFIAL---IQQDLELAPERIRHSEALVK 279 +L + A + +E ER ++ Sbjct: 245 AQLLVQAIADAAPLSAKASMEAFEERASRYRYFLR 279 >UniRef50_A4GJ53 Putative KpsF/GutQ n=1 Tax=uncultured marine Nitrospinaceae bacterium RepID=A4GJ53_9DELT Length = 338 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 72/173 (41%), Gaps = 3/173 (1%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWK 153 + K++ + A+ N ++ V L + +++TG+G SGL+ + + Sbjct: 21 SIIETARKVLDIESLAIAELGNRID-DQFVNVVHHLNQCKHLVITGVGKSGLIGKKISST 79 Query: 154 LMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 IG + + A + S D ++AIS +G E+ R+ ++ +T Sbjct: 80 FSSIGLPSLFLHASEASHGDLGMISEGDTVIAISNSGETDEVVKLLPIFNRIKCTLVGMT 139 Query: 214 GFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQDL 264 G ++L +R+ + L + + + + ++ A + D L +A ++ Sbjct: 140 GNMQSSLAKRSDYVLDVSVKVEACSKDLVPTASTTATLAMGDALAMAFMELRG 192 >UniRef50_Q04HE6 Hexulose-6-phosphate isomerase n=6 Tax=Firmicutes RepID=Q04HE6_OENOB Length = 180 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 72/168 (42%), Gaps = 11/168 (6%) Query: 102 LIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNA 161 L+ + + ++ E++L ++ +RI + G G SGL+A+ FA +LM IG+ Sbjct: 3 LVNQVLQEITTVMDDVDEKQLQAVEKIISKEKRIFVLGAGRSGLMAKGFAMRLMHIGYTV 62 Query: 162 AAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQ 221 + + D+L+++S +G + ++ + G +++A+T + + L Sbjct: 63 YVIGETITPSIAA-----GDVLVSVSGSGTTGSVLEPTEKAHQNGVEIVAVTSNSQSPLA 117 Query: 222 QRASHCLYTIAEEQATNSASISACHAQGM------LTDLLFIALIQQD 263 + + L +A + + D+L + L ++D Sbjct: 118 KNSDVALIVPGATKAGDGVKSIQLLSTLFDQTTHITLDILTLMLSRRD 165 >UniRef50_UPI0001C354ED RpiR family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C354ED Length = 243 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 70/189 (37%), Gaps = 13/189 (6%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + + Q+ +D+ + + P +++ L++ GVSQ ++ +F + LGY Sbjct: 1 MNVIQIMEQKKTEFTPNDQLIYQKISKDPGKIVQMTTSALSDACGVSQPALTRFVKGLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + + L LA Q + V +L++E + + Sbjct: 61 TRYQDFRADLIAWLAEQRTQQMPDCEHL-----EYFSVMNQLLREAEKILTDSY------ 109 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + R+ TG+ S A +MK G AV + + + + Sbjct: 110 -MRSLACYINQFNRVFTTGVSKSFQPASLLETLMMKTGRFFHAVPNDNISELSDSMM-EN 167 Query: 181 DLLLAISYT 189 DLL+ S + Sbjct: 168 DLLIVFSVS 176 >UniRef50_Q9LBW5 3-hexulose-6-phosphate isomerase n=2 Tax=Actinomycetales RepID=PHI_MYCGS Length = 199 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 65/182 (35%), Gaps = 12/182 (6%) Query: 103 IKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAA 162 + + T E++ + R+ + G G SGLV + A +LM G Sbjct: 22 LSLVRDEVADTAAKVDPEQVAVLARQIVQPGRVFVAGAGRSGLVLRMAAMRLMHFGLTVH 81 Query: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222 D + DLLL S +G + +A+ + G ++ A T + L Sbjct: 82 VAGDTTTPAISA-----GDLLLVASGSGTTSGVVKSAETAKKAGARIAAFTTNPDSPLAG 136 Query: 223 RASHCLYTIAEEQATNSASISACHA-------QGMLTDLLFIALIQQDLELAPERIRHSE 275 A + A ++ + + IS +A ++T+ +F +L A E Sbjct: 137 LADAVVIIPAAQKTDHGSHISRQYAGSLFEQVLFVVTEAVFQSLWDHTEVEAEELWTRHA 196 Query: 276 AL 277 L Sbjct: 197 NL 198 >UniRef50_B0BZZ6 Sugar isomerase, KpsF/GutQ family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0BZZ6_ACAM1 Length = 334 Score = 101 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 75/174 (43%), Gaps = 3/174 (1%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS-ARRIILTGIGASGLVAQNFAW 152 +KL+ A+ + E++++ V ++ + + +++L+G+G SG+VA+ A Sbjct: 11 TFASQVDKLLLLEAEAIAKAADRLQPEQVNQAVDLMINCSGKVVLSGVGKSGIVARKIAA 70 Query: 153 KLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAI 212 L +G A + + AL + + D+++ +S +G EL + + ++A+ Sbjct: 71 TLTSVGVMAVFLHPVEALHGDLGIVATTDVVVVLSNSGETDELIAMLPCLKQRQVPLIAL 130 Query: 213 TGFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQDL 264 G + L A L +++ N A ++ + D L + + Sbjct: 131 VGNVNSTLADEADVVLAATVDQEACPMNLAPTASTTVAIAIGDALAMTVTHAKG 184 >UniRef50_A6X2Q6 Transcriptional regulator, RpiR family n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X2Q6_OCHA4 Length = 284 Score = 101 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 50/283 (17%), Positives = 104/283 (36%), Gaps = 14/283 (4%) Query: 1 MNGLLRIRQRYQGL--AQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 M+ + IR + L +++DK +A Y+ +++ +A G+SQ +V ++ ++L Sbjct: 1 MSKEILIRLQSAELRKSKADKLIASYIERNLAELPFETAKSIAERLGISQMTVGRYLRRL 60 Query: 59 GYKGFPALKLALSEALAS---QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLN 115 G+ G LK AL ++ Q + P + R + L+++ + Sbjct: 61 GFDGLEELKTALRRGRSNPAWQVKGPVARLQQDFREG----KLLAGLVQQQIENLGTVYE 116 Query: 116 VNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL-ATV 174 + + + E + L A + + +AQ FA +L + + ++ + Sbjct: 117 LTTRPEWQETIDALIGASEVYVAAYQNVRGIAQYFASQLSYSRPGVSFMDGLNGTYAEVL 176 Query: 175 QASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE 234 S + +L + A E R+G KV+ T + A L Sbjct: 177 DGSRENRVLFLHDVRRFASKARPLAIEARRMGVKVILFTDEFCPWASEVADIALIVPGSH 236 Query: 235 QATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + + + DL+ +I Q ER++ L Sbjct: 237 GPLWDGAAT----MTAIMDLMLSHIIIQLGSQVDERVQSLTRL 275 >UniRef50_O26351 Uncharacterized protein MTH_249 n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=Y249_METTH Length = 197 Score = 101 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 9/142 (6%) Query: 95 LRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKL 154 LR +K+ K A+ E +L ++ + A + + G G S L+ + FA +L Sbjct: 7 LRNTVQKIAKHAIEAIDK----VDEAELEMMISKIMDASSVFIVGTGRSELIGKAFAMRL 62 Query: 155 MKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITG 214 M +GF V D+ +D L+AIS +G + + LAA+ VG V+A+T Sbjct: 63 MHLGFKVHVVGDVTTPA-----IRDEDCLIAISGSGETKTVTLAAETSRSVGATVVAVTA 117 Query: 215 FTPNALQQRASHCLYTIAEEQA 236 + L + + ++ + Sbjct: 118 TPESTLTGYSDVVICIPSKTKE 139 >UniRef50_D1PR02 Transcriptional regulator, RpiR family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PR02_9FIRM Length = 268 Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats. Identities = 44/227 (19%), Positives = 80/227 (35%), Gaps = 14/227 (6%) Query: 1 MNGL---LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQK 57 M L L I L +D +A +L LS QQLA+ VS+S++ KF ++ Sbjct: 1 MGILYNRLLIVLNDSDLDSTDYHIAMVMLQNMRRLAGLSIQQLADLCNVSKSTISKFIRE 60 Query: 58 LGYKGFPALK-LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNV 116 LGY+ F + A+ + V ++++ M + Sbjct: 61 LGYEDFADFRDAAVFQDNKYHNNYNFVEDVMGFLEHHSGDSYLLTVLRD----MQESYAS 116 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA 176 + V + + ++ G+ S A + KL G A + +A ++ Sbjct: 117 LDWAMVDRLVEDIATHEKVGAFGMMFSETAALDLQIKLGYNGKFIATSMNDRKQMAYLRH 176 Query: 177 SSPDDLLLAISYTG----VRRELNLAADE--MLRVGGKVLAITGFTP 217 + D L++ S +G R + + KV+ IT Sbjct: 177 ADADTLVIIFSDSGDYLNRYRNIRDFVRKSDFDDTKAKVVLITSSQE 223 >UniRef50_A0LE58 KpsF/GutQ family protein n=8 Tax=Bacteria RepID=A0LE58_SYNFM Length = 357 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 81/187 (43%), Gaps = 5/187 (2%) Query: 84 PIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGA 142 + + + +++ + + L+ S E V + A RII+TGIG Sbjct: 25 STEHPAASTKGILEIAADVLRIESEGILHLLDHIS-ESFARAVLWIYEAGGRIIVTGIGK 83 Query: 143 SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEM 202 SG+V + L G A + + A+ + D++LA+S +G ELN+ + Sbjct: 84 SGIVGRKIVATLSSTGTPALFIHPVEAMHGDLGMVRAGDIVLALSNSGETDELNIILPSL 143 Query: 203 LRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALI 260 +G +++A TG T + L Q + +YT + ++ A + D L +AL+ Sbjct: 144 KNIGTRIIAFTGDTSSTLAQYSDLTVYTGVPREACPMGLVPTASTTAMLAMGDALAVALL 203 Query: 261 Q-QDLEL 266 + ++ + Sbjct: 204 RLRNFQE 210 >UniRef50_B6WAA6 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6WAA6_9FIRM Length = 189 Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 41/202 (20%), Positives = 83/202 (41%), Gaps = 22/202 (10%) Query: 58 LGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 +GYKGF LK +L + S + ++ IR +D + ++++ Sbjct: 1 MGYKGFIELKYSLVNKVNSNKTKNYID-YSTIRLND----------------INNSIDLL 43 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 + + L++ + + + +R+ G G S L+ +L+ +G + D H LA V Sbjct: 44 NRQDLNKLINLFYN-KRVCFFGKGLSSLICDYAVTQLLILGLPVTHLADSHTALAYVDHM 102 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 + +D L IS +G + A + + G KV+ +TG N L + + I + Sbjct: 103 TSNDALFIISNSGNTSQCIKLALKAKKKGIKVITLTGSNINDLTRLSDLSYSVILSKDDR 162 Query: 238 NSASISACHAQGM----LTDLL 255 ++ + + DL+ Sbjct: 163 VDFDNASRAPMLLFVHKIIDLI 184 >UniRef50_B0SHW1 Sugar phosphate isomerase n=6 Tax=Leptospira RepID=B0SHW1_LEPBA Length = 324 Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 80/174 (45%), Gaps = 4/174 (2%) Query: 91 GDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQN 149 + + ++ + + +++ + C+ ++ +++ ++I+TG+G SG +A+ Sbjct: 2 KEKDTLGIIKQALDDEISSLVYFRENLDP-SVKNCIDLILNSKGKVIVTGVGKSGDIAKK 60 Query: 150 FAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKV 209 + L G +A + A PDD++LAI +G ELN + ++G K+ Sbjct: 61 ISHTLSSTGTSAYFLHPTDASHGDSGIVGPDDVVLAIGKSGESEELNYILPTLRKIGAKI 120 Query: 210 LAITGFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQ 261 + IT + + L + + + T E + A S+ +L D + +AL++ Sbjct: 121 VGITANSKSKLAELSDVVIITPVLKEACPLDLAPTSSTTIALVLGDAIAVALME 174 >UniRef50_B3E057 Arabinose 5-phosphate isomerase and CBS domains n=5 Tax=Verrucomicrobia RepID=B3E057_METI4 Length = 325 Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 76/179 (42%), Gaps = 7/179 (3%) Query: 92 DDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV----TMLRSARRIILTGIGASGLVA 147 + L + +++ A+ + + + + + +I++TG+G SG + Sbjct: 2 QEDLVGLAKRVFDLEMDALRIVRKQLN-AAFEQAILVLEKTILANGKIVVTGVGKSGHIG 60 Query: 148 QNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGG 207 + A L G + + ++A + + D ++A+SY+G E+ + R+ Sbjct: 61 RKIAATLTSTGAPSVVLDAVNAFHGDLGMVNRGDAVVALSYSGETEEILRLVPHLKRMTT 120 Query: 208 KVLAITGFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQDL 264 ++AITG + L + + L + + N A S+ A +L D L + L+++ Sbjct: 121 SLIAITGNENSTLAKNSDLVLSVRIDREACPLNLAPTSSTTAMLVLGDALAMVLLEKRG 179 >UniRef50_C2JQK2 Phosphosugar-binding transcriptional regulator n=10 Tax=Enterococcus RepID=C2JQK2_ENTFA Length = 251 Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 85/233 (36%), Gaps = 39/233 (16%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + I + L S+ + ++ D + L +++A + VS ++++ A+K+GY Sbjct: 22 MDTEMLIDKY--QLNDSEAAVLRFMDKNRDCLKSLGIREVAKASYVSTTAIINMAKKIGY 79 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ L A + S+ ++ + +L+ Sbjct: 80 SGYSELVFAY------GNKHSSISFPENFSNEEKDEFI--RLLSRYRE------------ 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +RI++ G G S +A +F+ L GF A A + L V Sbjct: 120 ------------KRIMVLGSGFSQNIANHFSEMLNLYGFRATANSHLEFLRENV----EK 163 Query: 181 DLLLAI-SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA 232 D+L+ I S +G L ++A G + + Q A+ + T Sbjct: 164 DVLIFIVSNSGDTLRLAELVKLAKNHHIDLIAFVGEKKSKIGQLATLTISTET 216 >UniRef50_Q6MPN9 Polysialic acid capsule expression protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MPN9_BDEBA Length = 326 Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 72/167 (43%), Gaps = 4/167 (2%) Query: 101 KLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGF 159 K+++ A+ A + + V M+ + +I+LTG+G SG +A+ A G Sbjct: 10 KVLEVEAQAILALKERL-GDSFEQVVKMITACDGKIVLTGMGKSGQIARKLASTFSSTGT 68 Query: 160 NAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNA 219 A + + + +D+++A+SY G E + R G ++AITG ++ Sbjct: 69 PAVFLHPAESSHGDLGLVENNDVVIALSYGGESPEFAGILRFVSRKGIPLIAITGKPESS 128 Query: 220 LQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQDL 264 L + A L E+ A ++ A + D + +A++ + Sbjct: 129 LAKAAQVTLNVHVSEEACPLGLAPTASSTATLAMGDAVAMAVMAEKG 175 >UniRef50_Q9YAK0 Uncharacterized protein APE_1940.1 n=23 Tax=Thermoprotei RepID=Y1940_AERPE Length = 212 Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats. Identities = 38/159 (23%), Positives = 71/159 (44%), Gaps = 9/159 (5%) Query: 91 GDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTML----RSARRIILTGIGASGLV 146 D L K + E + ++N ++ V L R R++++ G G SGLV Sbjct: 8 RDSKLSHPVFKTMSEIALFIINSINEIDVGQVDRFVGELERVYREKRKVLVMGAGRSGLV 67 Query: 147 AQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVG 206 + FA +L+ +GFN+ + + V + DL++AIS +G + + AA+ +VG Sbjct: 68 GKAFAMRLLHLGFNSYVLGET-----IVPSVREGDLVVAISGSGRTKVIVTAAETAKQVG 122 Query: 207 GKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 V AIT + + L + + + +++ A Sbjct: 123 ATVAAITTYPDSPLGRLSDIVVRVPGRTKSSKMDDYFAR 161 >UniRef50_C8ZXB1 Putative uncharacterized protein n=4 Tax=Enterococcus RepID=C8ZXB1_ENTGA Length = 273 Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats. Identities = 40/266 (15%), Positives = 86/266 (32%), Gaps = 18/266 (6%) Query: 15 AQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLA--LSE 72 + + +A LL S +A VS+S++ KFA+ +G++ + LK + +E Sbjct: 18 SSTYYHIAQTLLNNYSIIDKSSISDIATLCTVSKSTISKFARSIGFEDYYELKKSSTFAE 77 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 + I N I + + + + A ++ + E L + Sbjct: 78 NKYHFDLNYISNIINPIEKNG-----YDDYLDAIIKDISAFKQQSNMRSIDELAKCLTTY 132 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG-- 190 ++ G+ S A +F +KL G + + ++ + + LL+ S +G Sbjct: 133 NKVGAFGLLFSESAAIDFQYKLAYAGKFIITYQSDLKQIEFIEQADEETLLIIFSNSGGF 192 Query: 191 ----VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 R+ + K+ IT + + E + S Sbjct: 193 LQRQQLRDDIPYRNVFENTKAKIFVITANEEVRNYRFVHDVILFP-HETIFQTHSFIYQI 251 Query: 247 AQGMLTDLLFIALIQQDLELAPERIR 272 + D++ Q + Sbjct: 252 ----IMDIIVSKYRQYLEPPTISHKQ 273 >UniRef50_C9LT74 Arabinose 5-phosphate isomerase n=2 Tax=Bacteria RepID=C9LT74_9FIRM Length = 377 Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 75/180 (41%), Gaps = 5/180 (2%) Query: 91 GDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQN 149 D + + + AA+ EE V + RI++TG+G SG V + Sbjct: 53 KRDVIWEKAVETLSMEAAAVKKLTESVDEE-FCRAVECVLDCTARIVVTGMGKSGHVGRK 111 Query: 150 FAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKV 209 A L G + + A + + D++LAIS +G +E+ + R+G + Sbjct: 112 IAATLASTGTPSFFMHPAEAFHGDLGMVTDKDVVLAISNSGEVQEVVKILPVIHRIGATI 171 Query: 210 LAITGFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQ-QDLEL 266 +A+TG + L + + + + E + A ++ A + D + +A++ ++ + Sbjct: 172 IAMTGNRSSQLAEYSDYVIDIGHEPEACPLGLAPTTSTTATLAMGDAIAVAVMSVRNFKK 231 >UniRef50_B4RJ65 KpsF n=58 Tax=Bacteria RepID=B4RJ65_NEIG2 Length = 326 Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 63/176 (35%), Gaps = 4/176 (2%) Query: 91 GDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQN 149 ++ +++ + E L + R+++TG+G SG + + Sbjct: 5 ENEKYLDWAREVLHTEAEGLREIAAELD-ENFVLAADALLHCKGRVVITGMGKSGHIGRK 63 Query: 150 FAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKV 209 A + G A V A + +D++ AIS +G E+ + R + Sbjct: 64 MAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVAAISNSGESDEITAIIPALKRKDITL 123 Query: 210 LAITGFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQD 263 + IT + + + A + ++ A ++ A L D L + L++ Sbjct: 124 VCITARPDSTMARHADIHITASVSQEACPLGLAPTTSTTAVMALGDALAVVLLRAR 179 >UniRef50_C0AWM1 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0AWM1_9ENTR Length = 176 Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 66/172 (38%), Gaps = 7/172 (4%) Query: 33 RHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGD 92 + LA++A V S++++FA + GF +K L ++ + + + + + Sbjct: 2 AFDTIAILADKANVPPSTLIRFANAFHFNGFNEMKQLFQNHLMNEMVNENENLTYKQKYK 61 Query: 93 DPLRL------VGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLV 146 + + ++ + N+ ++ N E L++ + +L A I + G S Sbjct: 62 EEPPNLNEPAYILQEFAQANSHSLQQLANQTHREMLNKTLQLLEHADTIYICGFHHSFSA 121 Query: 147 AQNFAWKLMKIGFNAAAVRDMHALL-ATVQASSPDDLLLAISYTGVRRELNL 197 A F L I V + + ++ + D+L I + E+ Sbjct: 122 ASYFFHALSHISCETVFVNSLGGMYKEQLRNITHRDVLFGIHFHPYSDEMQK 173 >UniRef50_C9AA73 Predicted protein n=1 Tax=Enterococcus casseliflavus EC20 RepID=C9AA73_ENTCA Length = 271 Score = 99.7 bits (248), Expect = 9e-20, Method: Composition-based stats. Identities = 43/266 (16%), Positives = 96/266 (36%), Gaps = 16/266 (6%) Query: 2 NGLLRIRQRYQGLAQSDK-----KLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQ 56 N L + L +++ LA+Y L L+ Q+A++ VS+SS+ +F + Sbjct: 12 NRLSLLNSLCNILNENEVGNPSVILAEYFLKNYHYLSELNIYQVADDCFVSRSSIRRFCK 71 Query: 57 KLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNV 116 +GY F K + E ++ + + E L A++ Sbjct: 72 SIGYNNFAEFKNEIREY---------DDQYSNLTAHFRQQDFREILTNNVLEAIHEMSRS 122 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA 176 S E++H + +R ++ + F + ++ G V +++ ++ Sbjct: 123 ISREQIHLIARRIHKSRNTLILTSNYAVSAINTFQYGMVLQGKVIRLVSELYETNNLLKE 182 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 + DD ++ IS G+ + + + T + + E+ + Sbjct: 183 VTADDYVIVISGHGILAGVIE--EFLKTTTAYTELFTVNRSRSFDLLYDSICWLSEEDGS 240 Query: 237 TNSASISACHAQGMLTDLLFIALIQQ 262 S SI + L DL++ +++ Sbjct: 241 HESRSIYMVYGMQYLLDLVYANYVRE 266 >UniRef50_B1C5Y4 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C5Y4_9FIRM Length = 200 Score = 99.3 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 26/176 (14%), Positives = 74/176 (42%), Gaps = 3/176 (1%) Query: 91 GDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQN 149 + + V ++++ A+ V +K+ + V + + + +I G G+S A Sbjct: 3 KNMNNKEVLKEMLNREVNAVNNLSKVLDFDKIDKAVEKIANCKGNVIFAGCGSSSTAAFR 62 Query: 150 FAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKV 209 A + + A+ M+AL D+ + IS +G EL + ++G + Sbjct: 63 AANIYNFLYIPSVAINVMNALHGEYGMIREGDIFIPISKSGNTEELVQSIPIAKKLGAYI 122 Query: 210 LAITGFTPNALQQRASHCLYTIAEEQATNSA--SISACHAQGMLTDLLFIALIQQD 263 + +T + + + + + + ++ + + S+ ++ D++ A+++++ Sbjct: 123 IGLTENDNSYIAENSHIAITFNSLKELDDKDMVATSSTTCSSIILDIIGGAVMKKN 178 >UniRef50_Q6AQ42 Related to polysialic acid capsule expression protein (KpsF) n=1 Tax=Desulfotalea psychrophila RepID=Q6AQ42_DESPS Length = 327 Score = 99.3 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 4/176 (2%) Query: 97 LVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLM 155 +K+++ + A E+ V + + R+++TGIG SG+V Q + L Sbjct: 8 EAAKKVLEIEEQGLAAVRENI-GEEFLAAVEAIVNCPTRLVITGIGKSGIVGQKISATLN 66 Query: 156 KIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGF 215 IG ++ + + AL + D++LAISY+G ELN + G ++ +TG Sbjct: 67 SIGTSSFFLHPVEALHGDLGMVMATDVVLAISYSGETAELNGLLRSLKARGNTIIGMTGG 126 Query: 216 TPNALQQRASH--CLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPE 269 + L + + AE A ++ A L D L + L+ + A + Sbjct: 127 AKSTLAMASDIFLNIRIPAEACPLGLAPTTSTTATMALGDALGVVLLNRKQFKAED 182 >UniRef50_B6IXW6 Sugar isomerase, KpsF n=1 Tax=Rhodospirillum centenum SW RepID=B6IXW6_RHOCS Length = 330 Score = 99.3 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 73/187 (39%), Gaps = 3/187 (1%) Query: 90 RGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQ 148 DP+ L+ + A + V + + ++ G+G SGL+A+ Sbjct: 2 SAYDPIIASARDLLHIEAKTVLAQEQSLD-DGFLNVVNHIGTRDTNTLVAGVGKSGLIAR 60 Query: 149 NFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGK 208 A KL +G A AL + PDDLL+ +S +G REL ++ G + Sbjct: 61 LLASKLASVGTRAWYYSTTDALHGELGGLRPDDLLILLSNSGQTRELVDLGRCAIQRGAR 120 Query: 209 VLAITGFTPNALQQRASHCLYTIA-EEQATNSASISACHAQGMLTDLLFIALIQQDLELA 267 V A+ P+AL + A L E ++ A L D L IA+ ++ Sbjct: 121 VAAMVSRVPSALSRIADWTLRVHVEREATETRLPTASTAAMLALGDALVIAVARRRGFTV 180 Query: 268 PERIRHS 274 E R+ Sbjct: 181 DEYARNH 187 >UniRef50_A1RZ63 Glutamine amidotransferase, class-II n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RZ63_THEPD Length = 609 Score = 98.9 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 51/126 (40%), Gaps = 1/126 (0%) Query: 108 AAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKI-GFNAAAVRD 166 ++ TL+ ++ L ++ A + + G S ++ ++ G N V Sbjct: 264 ESLMRTLSSVQKKYLQLAARLVTGADNVYIIANGTSLHAGMVASYYFSELVGVNPVVVSA 323 Query: 167 MHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASH 226 L ++ P L+LAIS +G ++ + E G +L IT + + L + ++ Sbjct: 324 AEFPLYYLENIGPGSLVLAISQSGETGDVLSSLYEAKLRGATILGITNYVGSRLARLSNL 383 Query: 227 CLYTIA 232 L A Sbjct: 384 YLPIAA 389 >UniRef50_Q048M7 Transcriptional regulator n=2 Tax=Lactobacillus delbrueckii subsp. bulgaricus RepID=Q048M7_LACDB Length = 251 Score = 98.9 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 73/193 (37%), Gaps = 14/193 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L++SD+K+ + L+ LA EAG S +SV +F QK+GY Sbjct: 1 MDITNFFTVETSELSKSDRKIMKRMTSDLTNVESLTINHLAEEAGTSLASVQRFCQKMGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF K L + Q + ++ + + A+ +E+ Sbjct: 61 SGFKEFKFQLLTYIKKQESQEAAVSSSE-------------YLDDYHDAINRVWTA-NEK 106 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 E +L ++ + GI S L A+ + + +G + ++ A S + Sbjct: 107 DAEELAEVLATSSTNFIFGIYYSELPARLLSMGMRDLGKSTYFGDNLAAGEHLFPLSDEN 166 Query: 181 DLLLAISYTGVRR 193 + S +G+ + Sbjct: 167 STAVFYSVSGISK 179 >UniRef50_Q2LUX9 Arabinose-5-phosphate isomerase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LUX9_SYNAS Length = 336 Score = 98.9 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 76/177 (42%), Gaps = 4/177 (2%) Query: 91 GDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQN 149 D + E++++ ++ + V ++ + R+I+TGIG SGL+ + Sbjct: 8 QKDQTIVRAEEVLRIEAESILQLIGRLD-GNFSRAVDIIYRSPGRVIVTGIGKSGLIGKK 66 Query: 150 FAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKV 209 + G A + + L + + DD+LLAIS +G E+N + ++G + Sbjct: 67 IVATMTSTGTQALFLHPVEGLHGDLGIVTKDDVLLAISNSGETEEVNRLISSVQKIGTPL 126 Query: 210 LAITGFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQDL 264 ++ TG + + + + + E + A S+ A + D L +ALI + Sbjct: 127 ISFTGNPSSTMARASDAVIDVGVEREACPFGLAPTSSSTATLAMGDALAVALIDKHK 183 >UniRef50_A4FI47 Transcriptional regulator, RpiR family n=2 Tax=Pseudonocardineae RepID=A4FI47_SACEN Length = 303 Score = 98.9 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 51/237 (21%), Positives = 92/237 (38%), Gaps = 9/237 (3%) Query: 45 GVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIK 104 GV+ ++V + AQ LG+ G+ L+ L S +P V ++ +G ++ Sbjct: 66 GVNVATVSRTAQALGFTGWVDLQQELRARYLSSLSAPEVAAAHR-----TEGELGAASLR 120 Query: 105 ENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAV 164 + +M + + + +ARR ++ G+ V + G+ A+ V Sbjct: 121 RDLESMAVLSRRLDDGLVRTIAEAIAAARRTLIVANGSYVAVGSALGHNVGLAGYQASVV 180 Query: 165 RDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRA 224 RD L +V P D+L+AIS+ + + AA+E G +V +T AL + A Sbjct: 181 RDDADLANSVSRLEPGDVLVAISFWRLYQSTVTAAEEASSRGARVFVLTDAASPALVEAA 240 Query: 225 SHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + AE A + + + L D E I +EA + Sbjct: 241 EQVVLIPAEGVAF----FPSLAPGMAVAQAIVAHLSTVDPERTRRSIEAAEAQWARF 293 >UniRef50_D2RHI7 Sugar isomerase (SIS) n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RHI7_ARCPR Length = 206 Score = 98.5 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 9/116 (7%) Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMK----IGFNAAAVRDMHALLATVQ 175 E+L+E V +L+ ++ I + G+G SG VA FA +L +G V D + Sbjct: 30 ERLNEFVKILKDSKAIHVYGVGRSGAVALCFAIRLKHFEKVLGCKVWWVGD-----EVRE 84 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI 231 D L+A S +G E+ + A+ KV+A+T F ++L + A + Sbjct: 85 KIEEGDTLIAFSGSGETAEVLIVAERAKNANAKVVAVTSFEDSSLARMADLVIIIP 140 >UniRef50_Q03Y13 Sugar phosphate isomerase with CBS domains n=6 Tax=Lactobacillales RepID=Q03Y13_LEUMM Length = 320 Score = 98.5 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 67/167 (40%), Gaps = 7/167 (4%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKI 157 +K A+ + + E V + S + R+I GIG SG++A A + Sbjct: 10 AKKTFDVEIEALTRVKSSL-GKSFDEAVDKILSTKGRVIFIGIGKSGIIADKIAASFSSV 68 Query: 158 GFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNL---AADEMLRVGGKVLAITG 214 G + + A + S DD+++ IS +G +E+ A + +A+TG Sbjct: 69 GLASFYIDAGTAYHGDLGRVSSDDVVIFISNSGETQEVLQALSALQNIHNNELATIAMTG 128 Query: 215 FTPNALQQRASHCLYTIAEEQAT--NSASISACHAQGMLTDLLFIAL 259 + L + L E+A A S+ A ++ D L +A+ Sbjct: 129 SEDSTLAKNTDIVLSIDVAEEADITKLAPTSSTTATLVMGDALLVAI 175 >UniRef50_B3QSH3 KpsF/GutQ family protein n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QSH3_CHLT3 Length = 333 Score = 98.5 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 38/171 (22%), Positives = 78/171 (45%), Gaps = 4/171 (2%) Query: 97 LVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA-RRIILTGIGASGLVAQNFAWKLM 155 + + + + A+ A E+ + V ++ +A ++I+TG+G SG++AQ A + Sbjct: 18 DLARQTLLLESKALEAVSTRLD-EQFNAAVRLILNATGKVIITGMGKSGIIAQKIAATMT 76 Query: 156 KIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGF 215 G A + A + S D+++ +S +G EL + ++ +++A+ G Sbjct: 77 STGTPAVFMHPSEAAHGDLGVVSKGDVVIGLSKSGTTEELLYILPALKQLQVQIIAMVGN 136 Query: 216 TPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQDL 264 +AL RA L E++ + A ++ A + D L +AL+Q Sbjct: 137 VRSALALRADAVLDVAVEKEACPYDLAPTTSTTAMLAMGDALAMALMQAKK 187 >UniRef50_D1U3G0 KpsF/GutQ family protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U3G0_9DELT Length = 343 Score = 98.5 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 37/168 (22%), Positives = 75/168 (44%), Gaps = 4/168 (2%) Query: 97 LVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLM 155 + +++ + T++ + +T++ R R+++TGIG SGLV + A L Sbjct: 12 ELAREVLDIEIEGL-RTVSGQLGDGFVRALTLMAECRGRVVITGIGKSGLVGRKIAATLS 70 Query: 156 KIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGF 215 G A + + + +D++LA+S +G E+N + +G V+A+TG Sbjct: 71 STGTPAFFLHPVEGAHGDMGMIRSEDVVLALSNSGGSDEVNAIIPTLRSLGATVIAMTGN 130 Query: 216 TPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQ 261 T +A+ + A + + A S+ A + D L + L++ Sbjct: 131 TASAMAELADITIEVRVPREACPMGLAPTSSTTAHLAVGDALAVCLME 178 >UniRef50_A4INF7 Predicted sugar phosphate aminotransferaseinvolved in capsule formation n=3 Tax=Bacillaceae RepID=A4INF7_GEOTN Length = 183 Score = 98.5 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 69/183 (37%), Gaps = 13/183 (7%) Query: 103 IKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAA 162 I+ + + + L A+RI + G G SG + + FA +LM +G Sbjct: 5 IEVIFSEIEQVFAEFDHMSIECVAMRLAKAKRIFVAGEGRSGFMGKAFAMRLMHLGATVY 64 Query: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222 AV + + D L+AIS +GV ++ A++ ++G +V+A+T +AL Sbjct: 65 AVGET-----VTPSLQSGDTLIAISGSGVTKQTVWIAEKAKQLGCEVIAVTTDLSSALAN 119 Query: 223 RASHCLYTIAEEQATNSASISACHAQ--------GMLTDLLFIALIQQDLELAPERIRHS 274 AS ++ A + + ++ D + + + + Sbjct: 120 IASLTVHIPAATKYRRGHETQSKQPLGSLFDQCTHLILDAICLQYANNQQVEHQKAFQRH 179 Query: 275 EAL 277 L Sbjct: 180 SNL 182 >UniRef50_A0B0Z7 Transcriptional regulator, RpiR family n=68 Tax=Proteobacteria RepID=A0B0Z7_BURCH Length = 295 Score = 98.5 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 40/287 (13%), Positives = 82/287 (28%), Gaps = 25/287 (8%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 + R+ L + K++A Y+L D ++ Q+A + G S SV +F + +GY+ L Sbjct: 9 VESRFAELTPTAKRIASYMLANLDRLGLETADQIAQQTGTSGISVGRFLRSVGYRNLDDL 68 Query: 67 KLALS-------------EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYAT 113 K L + +P+ D ++ A+ Sbjct: 69 KRELRGGGDRPWMITDRLDEYRRATATPTTVGERDGHRDGGT---LASSLERELDAIRHV 125 Query: 114 LNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLAT 173 + E + + A + + GI ++ ++ F+ L + Sbjct: 126 YRLAEEPVFAQVADRIAHADAVFILGIQSTRGISNAFSSYLEYLRPRVFYSDGQSGSYVD 185 Query: 174 VQASS-PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQR--ASHCLYT 230 S + R G +T + A L Sbjct: 186 SLNSEFERPYCIVTDTRAYSRSARRYCQAAAERGQPFALVTDLY-CPWAREWPADL-LQV 243 Query: 231 IAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + + L +LL A++ + R+ + L Sbjct: 244 KTDVGQFWD----SLAPLTCLFNLLITAVVDRLGPAIDRRVARNREL 286 >UniRef50_Q3ATD5 KpsF/GutQ n=10 Tax=Chlorobiaceae RepID=Q3ATD5_CHLCH Length = 328 Score = 98.5 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 39/181 (21%), Positives = 81/181 (44%), Gaps = 4/181 (2%) Query: 87 NQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGL 145 L +G +++++ A+ E + ++ + + ++I++G+G SG+ Sbjct: 4 TPQTETATLTGIGRQILEQEAQAIAHIAEHLDHH-FAEAIQVMVACKGKVIVSGMGKSGI 62 Query: 146 VAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRV 205 +AQ A + G A + A + + +D++L +S +G ELN + ++ Sbjct: 63 IAQKIAATMASTGTTALFLHPADAAHGDLGVVAAEDVVLCLSKSGSTEELNFIIPPLRQL 122 Query: 206 GGKVLAITGFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQD 263 G K++ +TG + L Q A L T ++ + A ++ A + D L I L+QQ Sbjct: 123 GAKIIVMTGNPRSFLAQNADITLNTGVAKEACPYDLAPTTSTTAMLAMGDALAITLMQQK 182 Query: 264 L 264 Sbjct: 183 K 183 >UniRef50_D1B671 KpsF/GutQ family protein n=2 Tax=Synergistaceae RepID=D1B671_THEAS Length = 334 Score = 98.1 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 4/168 (2%) Query: 95 LRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS-ARRIILTGIGASGLVAQNFAWK 153 L VG ++I++ A+ + E L M+ S + R+++ G+G SGL+ + A Sbjct: 17 LLEVGLQVIRQEARALEDGASRMGLE-LVRAARMVASCSGRVVVCGLGKSGLIGRKIAAT 75 Query: 154 LMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 L +G A + + DD+ L +S +G RE+ R+G V+A+T Sbjct: 76 LASLGCPAFFLHAAEGSHGDLGMVCRDDVGLFLSNSGTTREVLEMVPFFRRIGCPVIALT 135 Query: 214 GFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIAL 259 G + L A L E A S+ Q + D L + Sbjct: 136 GRRDSPLGLSADVVLDCSVGREADPLGIAPTSSTTLQLAVGDALAGMV 183 >UniRef50_Q0W0H5 Putative hexulose-6-phosphate isomerase n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W0H5_UNCMA Length = 211 Score = 97.8 bits (243), Expect = 3e-19, Method: Composition-based stats. Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 13/167 (7%) Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 + S + ++ D + + + LI + L E +ML SA Sbjct: 2 EVKSPRTDAPINVNTNQVVTDTMISIADSLINIA--------DSIDASNLDEFASMLTSA 53 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVR 192 RI + G G SGLVA++FA +LM IGF V + A + D+++AIS +G Sbjct: 54 NRIFVMGAGRSGLVAKSFAMRLMHIGFQVYVVGE-----IITPAVTAGDVVVAISGSGNT 108 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 R ++ + ++ K++ +T +AL + + + +++ S Sbjct: 109 RTISEFGEICKKLNVKLVTVTTNKDSALGRMSDLVVILDNKQKPVQS 155 >UniRef50_Q0BL14 Arabinose-5-phosphate isomerase n=20 Tax=Gammaproteobacteria RepID=Q0BL14_FRATO Length = 327 Score = 97.8 bits (243), Expect = 3e-19, Method: Composition-based stats. Identities = 37/165 (22%), Positives = 66/165 (40%), Gaps = 7/165 (4%) Query: 103 IKENTAAMYATLNVNSEEKLHECVTMLRSARR----IILTGIGASGLVAQNFAWKLMKIG 158 + + N E + ++ R +I+TG+G SG + + A G Sbjct: 16 FRLEIETLEKLKNSID-ENFEKACEIILENNRDKSRVIITGMGKSGHIGKKMAATFASTG 74 Query: 159 FNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPN 218 A V A + +D+L+AIS +G E+ + + ++AIT + Sbjct: 75 TPAFFVHPGEAGHGDFGMITKNDVLIAISNSGTSSEIMGLLPMIKHLDIPIIAITSNPKS 134 Query: 219 ALQQRASH--CLYTIAEEQATNSASISACHAQGMLTDLLFIALIQ 261 L + ++ L+ E N A S+ A +L D L IAL++ Sbjct: 135 ILARNSNVTLNLHVDKEACPLNLAPTSSTTATLVLGDALAIALLK 179 >UniRef50_B8CZC0 KpsF/GutQ family protein n=4 Tax=Bacteria RepID=B8CZC0_HALOH Length = 331 Score = 97.8 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 4/169 (2%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKI 157 K+++ ++ + + + V ++ ++ R+I TGIG SGL+ Q A Sbjct: 19 ARKVLEIEAYSVLKLKDSI-GSEFADIVRVILESKGRVIFTGIGKSGLIGQKLAATFSST 77 Query: 158 GFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTP 217 G A V AL + + DD+++AIS +G E+ + R+G ++A+TG Sbjct: 78 GTPAFFVHAGEALHGDLGMVTGDDIIIAISNSGETEEVLSLVPSIRRIGAFLIAVTGNRS 137 Query: 218 NALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQDL 264 + L + A++ L EE+ A ++ A L D L IAL + Sbjct: 138 STLARYANNHLLVNIEEEACPHGLAPTASTTATLALGDALAIALSKLKG 186 >UniRef50_C2CUT9 Possible glucose-6-phosphate isomerase n=1 Tax=Gardnerella vaginalis ATCC 14019 RepID=C2CUT9_GARVA Length = 184 Score = 97.8 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 59/136 (43%), Gaps = 5/136 (3%) Query: 98 VGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKI 157 + K ++ ++ T +V + + E + ++ ARRI+ G+G GL + F +LM + Sbjct: 1 MNSKDVESILNELHQTFDVMNYSSIDEVIEKIKFARRIVCAGVGREGLTCRAFCMRLMHL 60 Query: 158 GFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTP 217 G+++ + D T + S D+ +G L A G ++ +TG Sbjct: 61 GYSSHWIWD-----DTAPSISKGDVFFFTCGSGEIEHLLTVARLAKESGATLICVTGVPD 115 Query: 218 NALQQRASHCLYTIAE 233 ++ + + ++ A Sbjct: 116 SSAAKLSDLTIFIPAS 131 >UniRef50_B0PES3 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PES3_9FIRM Length = 209 Score = 97.8 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 70/176 (39%), Gaps = 4/176 (2%) Query: 92 DDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNF 150 D+ + ++ I++ + A+ + E + + + R+I+TG+G +G + + Sbjct: 6 DEKIIDFCKEQIQKESDALLRVKSQVD-EAYAQACRAILDCKGRVIVTGLGKTGHIGKKI 64 Query: 151 AWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVL 210 A + +G A V L + + DDL++ IS +G E+ + +G K + Sbjct: 65 AATMASLGIPAFFVHSCETLHGDMGMITKDDLVIMISNSGKSSEILNMLAPLKIIGAKTI 124 Query: 211 AITGFTPNALQQRASHCLYTIAEEQATNSA--SISACHAQGMLTDLLFIALIQQDL 264 +IT + L + + A + + ++ + D L + + Sbjct: 125 SITKDKHSPLAEATDIKILCDAGPEIDHMGLAPTASSTGALAIGDALATVVCKMRG 180 >UniRef50_Q0RXZ1 Possible transcriptional regulator n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0RXZ1_RHOSR Length = 282 Score = 97.8 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 48/241 (19%), Positives = 91/241 (37%), Gaps = 9/241 (3%) Query: 42 NEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEK 101 A V+ ++VV+ AQ LG++G+ LAL + S+ + + Sbjct: 45 ETARVNTATVVRAAQALGFEGW----LALRAEVRSRYLASLSATEVSAEHAERGVHPASS 100 Query: 102 LIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNA 161 ++++ A + + + T + A R + G+ VA A +G+ Sbjct: 101 AVRQDVANVGLFARSLDLDVIEHFATAISQASRTAVVTTGSYAAVAAPLAHLGAVMGYPI 160 Query: 162 AA-VRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNAL 220 A +R L + + +P+ +AIS+ + E+ AA R G V IT L Sbjct: 161 AMEIRGGTHLANVMSSMTPESCFVAISFWRLHAEILKAARSAARRGATVCVITDSVSTPL 220 Query: 221 QQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + A H + +E + + A + + +L QQ + + I E + Sbjct: 221 TEVADHVIVVSSE----GGSWFPSMTAGVCAVNAVLTSLEQQGGQKVQDAIADMEHTWAE 276 Query: 281 L 281 L Sbjct: 277 L 277 >UniRef50_C6AWU1 Transcriptional regulator, RpiR family n=11 Tax=Rhizobium/Agrobacterium group RepID=C6AWU1_RHILS Length = 284 Score = 97.4 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 109/277 (39%), Gaps = 8/277 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + ++RQ + +++++A Y + ++ +A+ +S +V +F + LGY+ Sbjct: 3 DFVQKLRQYAKTGTPAERRIAKYFTEHLNDLPFETAASVADRLDLSPMTVGRFLRSLGYQ 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G ++K+ + E + + P + +++ D L+ E A++ ++ ++ Sbjct: 63 GLDSVKVEIRETVTTSPAQLQSAM-SELHADAAEGKPLAVLVAEQIQALHHIYHLTAQPH 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLM--KIGFNAAAVRDMHALLATVQASSP 179 E V ++ +AR + + +A +F +L + G D + + Sbjct: 122 WSEAVGLISTAREVSIATHARLASLANHFCQRLTQARDGVRTLDAADNRFAELFARLAVD 181 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D LL+ I + A R G KV+ I+ + + +++ L + Sbjct: 182 DALLVIIDCRRFAKARL-LARTARRYGYKVVLISPQQADWMADQSNVMLPLP----PARA 236 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + L D L ++I Q E A R R Sbjct: 237 PDLDNLPPLIALLDCLSESVILQVGEEAALRRRRMME 273 >UniRef50_C6DIN8 KpsF/GutQ family protein n=10 Tax=Enterobacteriaceae RepID=C6DIN8_PECCP Length = 363 Score = 97.4 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 35/203 (17%), Positives = 75/203 (36%), Gaps = 8/203 (3%) Query: 69 ALSEALASQPESPSVPI----HNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 ALS+ +P +++ D + G+++I + + Sbjct: 17 ALSDHATQADHAPQADHTRQKSHELPADFDFQQAGKQVISIERDGLAQLDQYID-DNFTL 75 Query: 125 CVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 + + ++++ G+G SG + A G A V A + +P D++ Sbjct: 76 ACKKIFDCQGKVVVMGMGKSGHIGCKMAATFASTGTPAFFVHPGEASHGDLGMVTPHDIV 135 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ--ATNSAS 241 +AIS +G E+ + R ++ +T + + + A L ++ A Sbjct: 136 IAISNSGESHEILSLIPVLKRQKVFLICMTSAPESTMGKAADIHLCVHVPQEACPLGLAP 195 Query: 242 ISACHAQGMLTDLLFIALIQQDL 264 S+ A ++ D L +AL+Q Sbjct: 196 TSSTTATLVMGDALAVALLQARG 218 >UniRef50_Q1Q2H0 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q2H0_9BACT Length = 329 Score = 97.4 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 75/173 (43%), Gaps = 5/173 (2%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS-ARRIILTGIGASGLVAQNFAW 152 +K++ + A+ ++ + V ++ + + R+ +TG+G +G++ Q + Sbjct: 12 SDIDYAKKVLLLESEAIKNQIHRID-NHFQKAVDIIFTCSGRVAVTGVGKAGIIGQKISA 70 Query: 153 KLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAI 212 L G + + A + D++LA+S +G E+ L + ++G K++++ Sbjct: 71 TLASTGTPSYWIHSSEARHGDLGKIVASDIVLALSNSGET-EVVLLLPFLKQMGTKIISV 129 Query: 213 TGFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQD 263 TG ++L + L E+ A S+ A + D + + + ++ Sbjct: 130 TGNNKSSLALHSDVVLDIGNVEEACPLGIAPSSSTTAMLAIGDAIALTIFKKR 182 >UniRef50_P45313 Probable phosphosugar isomerase HI1678 n=43 Tax=Bacteria RepID=Y1678_HAEIN Length = 337 Score = 97.0 bits (241), Expect = 6e-19, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 70/166 (42%), Gaps = 4/166 (2%) Query: 98 VGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMK 156 + + + + A+ + ++ + ++ + R+++ GIG SGL+ + Sbjct: 32 IAQDSLSVESNALLQLSQRL-GDDFNQVIDLILACEGRLVIGGIGKSGLIGKKMVATFAS 90 Query: 157 IGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT 216 G + + A + P D+++ ISY+G ++N + G K++A+T Sbjct: 91 TGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGETDDVNKLIPSLKNFGNKIIAVTSNK 150 Query: 217 PNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALI 260 + L + A + L E + N A ++ L D L ++LI Sbjct: 151 NSTLARHADYVLDITVEREVCPNNLAPTTSALVTLALGDALAVSLI 196 >UniRef50_D1PYZ2 Arabinose 5-phosphate isomerase n=9 Tax=Prevotella RepID=D1PYZ2_9BACT Length = 328 Score = 97.0 bits (241), Expect = 6e-19, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 73/168 (43%), Gaps = 4/168 (2%) Query: 97 LVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLM 155 ++ + E A+ + + V ++ R +II+TG+G SG + A L Sbjct: 14 DYAKRCLTEEAQAISDLMLQLD-DSFTRAVELMYHCRGKIIVTGVGKSGNIGAKIAGTLS 72 Query: 156 KIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGF 215 G A + + A + + DD++LA+S +G EL +L + ++ ++ Sbjct: 73 STGTPAFFINPLDAYHGDLGVMTSDDVVLALSNSGQTDELLRFIPILLHMNIPIVGMSRN 132 Query: 216 TPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQ 261 + L + ++ + + + N A S+ A ++ D L IAL+Q Sbjct: 133 PESLLAKYSTVHIKVWVDHEACPLNLAPTSSTTAALVMGDALAIALMQ 180 >UniRef50_A6NTR6 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A6NTR6_9BACE Length = 324 Score = 97.0 bits (241), Expect = 6e-19, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 71/178 (39%), Gaps = 5/178 (2%) Query: 97 LVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLM 155 +L A+ + + + L + + + R ++I+TG+G G + A + Sbjct: 10 TSARRLFDTEIRALESVRDSLDQRFLD-ILEQIVNCRGKVIITGMGKPGHIGTKIAATMA 68 Query: 156 KIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGF 215 +G A + AL + DD++LAISY+G E+ + +G ++ I+G Sbjct: 69 SLGTPAFYLHPAEALHGDLGMVGADDVVLAISYSGESDEVIRLIPSLKLIGATLIGISGN 128 Query: 216 TPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQDLELAPERI 271 + L + + + E+ + A S+ A +L D L + + + Sbjct: 129 ADSTLIRFSDYSFVFPPFEEACHMHLAPTSSTTAALVLGDALAVC-ASERYGFNEKNF 185 >UniRef50_C7NES0 KpsF/GutQ family protein n=6 Tax=Fusobacteriaceae RepID=C7NES0_LEPBD Length = 325 Score = 97.0 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 71/167 (42%), Gaps = 5/167 (2%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTML--RSARRIILTGIGASGLVAQNFAWKLMK 156 + + + N + + V + ++++TGIG SG++ + A L Sbjct: 9 AKSVFDIEITELEKLKNRI-GDSFQKLVNTIMELKNNKVVVTGIGKSGIIGEKIAATLAS 67 Query: 157 IGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT 216 G A + AL + S D+++AIS +G E+ + ++GGK++ TG Sbjct: 68 TGTTAVFLNAAEALHGDLGIISNGDVVIAISNSGNSDEILSILSPIRKIGGKIVGFTGNP 127 Query: 217 PNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQ 261 + L + A + E++ A +S+ + + D L + L++ Sbjct: 128 NSTLGKYADITINVGVEKEACPLGQAPMSSTTSTLVTGDALAVCLMK 174 >UniRef50_Q5JH71 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=53 Tax=cellular organisms RepID=GLMS_PYRKO Length = 602 Score = 97.0 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 60/174 (34%), Gaps = 3/174 (1%) Query: 108 AAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM 167 A+ ++ + E + + + +II +G S A ++ V + Sbjct: 264 RAIKDAIHG-NREIIRSVAEEIANYDKIIFVAMGTSYHAALVGKSLFQRLAKKVPIVEEA 322 Query: 168 HALLATVQ-ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASH 226 + L++AI+ +G + A + G KVLA+ + + A Sbjct: 323 SEFRYEFEDLIDDKTLVIAITQSGETADTLAAMKLAKKNGAKVLAVVNVVGSMATRIADL 382 Query: 227 CLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 LYT A A+ Q + +L I L + + + + E + K Sbjct: 383 TLYTHA-GPEIGVAATKTYTTQLTVLTMLAIELAKVLGTASEDYLEKLEDELMK 435 Score = 42.7 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 23/149 (15%), Positives = 47/149 (31%), Gaps = 10/149 (6%) Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG-FNAAAVRDMHALLATVQASS 178 E L E L+ R G G S A A KL +I +A + + Sbjct: 448 EALRELAETLKDKRDFFYIGRGISVPTALEGALKLKEISYIHAEGLSAGELKHGPLALLE 507 Query: 179 PDDLLLAISYTGVRRE-LNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 ++AI+ +G + + +E G +++++ L + + + ++ Sbjct: 508 DGVPVVAINPSGKVFDKMVSNIEEAKARGAMIISLSDRE--ELSRVSDVLVKMPEVDELL 565 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLEL 266 + + LL L Sbjct: 566 ------SPIVYVVPLQLLAYHLAVLRGND 588 >UniRef50_Q1Q5Y0 Conserved hypothetical sugar phosphate isomerase protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q5Y0_9BACT Length = 200 Score = 97.0 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 5/143 (3%) Query: 92 DDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFA 151 + LV + K +++ L+ +E+ + + + A+ I +TG G SGLV++ FA Sbjct: 11 KNTTTLVIKPTTKIILNEIHSVLDKINEQSFAQLFSSILDAKNIFVTGQGRSGLVSRTFA 70 Query: 152 WKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLA 211 +L IG NA V D DLL+A S +G A+ + V A Sbjct: 71 MRLTHIGLNAYCVGDATTP-----NIDKGDLLIACSSSGNTHITCYIAELAKKSFATVAA 125 Query: 212 ITGFTPNALQQRASHCLYTIAEE 234 IT + L + A + +E Sbjct: 126 ITSQKNSPLTEYADIIVDLPVQE 148 >UniRef50_B1L7C4 Sugar isomerase (SIS) n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L7C4_KORCO Length = 201 Score = 96.6 bits (240), Expect = 8e-19, Method: Composition-based stats. Identities = 41/201 (20%), Positives = 73/201 (36%), Gaps = 27/201 (13%) Query: 98 VGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA---RRIILTGIGASGLVAQNFAWKL 154 V EK+ K + L+ +E + + L +I + G G SGLVA+ FA +L Sbjct: 6 VVEKIGKL-IEVVKENLSTVDDESANMFIKALFRTMGEGKIFVVGAGRSGLVAKAFAMRL 64 Query: 155 MKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITG 214 + +GF V + + DLL+A+S +G + AA VG V+AIT Sbjct: 65 LHVGFQVYVVGET-----VTPSMRSGDLLIAVSGSGETKFPVTAAQVAKSVGAHVIAITS 119 Query: 215 FTPNALQQRASHCLYTIAEEQATN-SASISAC-----------------HAQGMLTDLLF 256 + + L + A + + S + + D L Sbjct: 120 YPDSTLGKIADFVVRIGGRVLPEDESRDYFTRQILGIHEPLTPLGTLFELSAMIYLDALI 179 Query: 257 IALIQQDLELAPERIRHSEAL 277 +++ + + R + Sbjct: 180 SEIVELMGKSEEDLARRHANI 200 >UniRef50_Q4FNC0 Arabinose 5-phosphate isomerase n=3 Tax=Candidatus Pelagibacter RepID=Q4FNC0_PELUB Length = 323 Score = 96.6 bits (240), Expect = 8e-19, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 69/172 (40%), Gaps = 3/172 (1%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAW 152 + + + +I A+ + + +E V L + + ++IL G+G SGL+A + Sbjct: 5 NYKKIAKSVIDLEIKALKKLKDSIN-NSFNEAVESLANCQSKVILCGVGKSGLIAAKISA 63 Query: 153 KLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAI 212 L +G + ++ + + S D+L+ ISY+G EL R ++ I Sbjct: 64 TLSSVGTPSFSLSANDCSHGDLGSISKKDILILISYSGSTEELKNIIKYANRNKITLIGI 123 Query: 213 TGFTPNALQQRASHCLYTI-AEEQATNSASISACHAQGMLTDLLFIALIQQD 263 + L + + L E S+ Q + D L +A++ + Sbjct: 124 MSKKNSILYKASDIKLLIPEVTEAGLGIVPTSSTINQLSIGDALAVAVLNKK 175 >UniRef50_Q1IST9 KpsF/GutQ family protein n=5 Tax=Bacteria RepID=Q1IST9_ACIBL Length = 338 Score = 96.6 bits (240), Expect = 8e-19, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 70/178 (39%), Gaps = 13/178 (7%) Query: 100 EKLIKENTAAMYATLNVNS---EEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLM 155 E +++ A+ + + V +L R++++G+G SGL+ + A Sbjct: 16 ENVVRIEAEALRELADRIAGPMAADFQRAVDLLACCGGRVVVSGMGKSGLIGRKMAATFS 75 Query: 156 KIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT-- 213 G A + A+ + + D+++A+S +G E+ + R+G V+ +T Sbjct: 76 STGAPALFLHPAEAMHGDLGMIARGDVVIALSASGETEEILNLLPTIKRLGAPVITMTCD 135 Query: 214 -----GFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQDL 264 G + L Q A L ++ A ++ L D L +AL ++ Sbjct: 136 NLYANGAKRSTLAQAADVALDCSIAQEACTLGLAPTASTTTMLALGDALAMALAEKRG 193 >UniRef50_Q8TUU0 Predicted sugar phosphate isomerase n=1 Tax=Methanopyrus kandleri RepID=Q8TUU0_METKA Length = 180 Score = 96.2 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 73/183 (39%), Gaps = 11/183 (6%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHEC----VTMLRSARRIILTGIGASGLVAQNFAWKL 154 K+++ + N EE + + V +R+ R I + G+G +GL+ + FA +L Sbjct: 4 IRKIMRREAEVIEYACNNLPEEDVKKALDLVVEKIRNDRGIFIVGMGRTGLIGECFAVRL 63 Query: 155 MKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITG 214 +++G V +A PDDLL+A+S +G +N AAD G VLA+T Sbjct: 64 VQMGARCYVVGHSTE-----RAIKPDDLLIALSVSGNTAFVNYAADVAKDEGADVLAVTM 118 Query: 215 FTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 + + ++A + E+ + D L ++ + Sbjct: 119 NADSKIAEKADVVVVLPEPEEIILRTF--SEMLMLSFLDGFTAQLAKELGVDESDMWERH 176 Query: 275 EAL 277 + Sbjct: 177 AKI 179 >UniRef50_Q4J6D9 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=3 Tax=Sulfolobaceae RepID=GLMS_SULAC Length = 590 Score = 96.2 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 83/208 (39%), Gaps = 10/208 (4%) Query: 77 QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN--SEEKLHECVTMLRSARR 134 + + + K I E+ ++ T++ + + + + ++S+ R Sbjct: 236 SDRVRVIDWDVETASKEGYPHFMIKEIHESPKSIRDTVDSLISDLDLIDKIIAEMKSSGR 295 Query: 135 IILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRE 194 I++ G G S F+ L + G N+ + DDL+ AIS +G + Sbjct: 296 IVVVGAGTSYHAGLYFSLLLSREGMNSFPLIASEYYNFKA---KKDDLIFAISQSGETLD 352 Query: 195 LNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDL 254 L A + G +++++T +AL + +++ +Y A + A+ Q L Sbjct: 353 LLQAVRKFKEEGARIVSLTNVIESALARESNYKIYMRA-GPEISVAATKTFITQL--ISL 409 Query: 255 LFIALIQQDLELAPERIRHSEALVKKLV 282 LF + + + R ++ V++++ Sbjct: 410 LF--IYSRLRRDNTNKFRGADTEVERVI 435 >UniRef50_C6VU42 KpsF/GutQ family protein n=3 Tax=Sphingobacteriales RepID=C6VU42_DYAFD Length = 324 Score = 96.2 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 77/174 (44%), Gaps = 4/174 (2%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAW 152 ++ + ++++++ A+ + + ++ +CV + + R++++G+G S +V Q Sbjct: 6 NIQSIAKEVLRQEAEAVRDLIELID-DEFEKCVYAILHSGGRVVISGVGKSAIVGQKIVA 64 Query: 153 KLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAI 212 L G A + A+ + +D+++ IS +G E+ + + R G K++A+ Sbjct: 65 TLNSTGTPALFMHAADAIHGDLGMIQDNDVVIVISKSGDTPEIKVLVPLLKRTGVKMIAM 124 Query: 213 TGFTPNALQQRASHCL--YTIAEEQATNSASISACHAQGMLTDLLFIALIQQDL 264 + L + L + AE N A ++ L D L I L++ Sbjct: 125 VSNKDSYLAKNCILTLHAHAPAEADPLNLAPTTSTSVTMALGDALAICLLEARG 178 >UniRef50_Q8D1Q8 Arabinose 5-phosphate isomerase n=525 Tax=cellular organisms RepID=KDSD_YERPE Length = 328 Score = 96.2 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 28/181 (15%), Positives = 69/181 (38%), Gaps = 4/181 (2%) Query: 87 NQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGL 145 ++ + G+++++ + +E+ + ++++ G+G SG Sbjct: 4 FDLQPGVDFQQAGKQVLQIEREGLAQLDQYINED-FSRACEAIFRCHGKVVVMGMGKSGH 62 Query: 146 VAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRV 205 + A G A V A + +P D++LAIS +G E+ + R Sbjct: 63 IGCKIAATFASTGTPAFFVHPGEASHGDLGMITPQDIVLAISNSGESNEILTLIPVLKRQ 122 Query: 206 GGKVLAITGFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQD 263 ++ ++ + + + A L ++ A ++ A ++ D L +AL++ Sbjct: 123 KILLICMSSNPESTMGKAADIHLCINVPQEACPLGLAPTTSTTATLVMGDALAVALLKAR 182 Query: 264 L 264 Sbjct: 183 G 183 >UniRef50_C3RQ42 Predicted protein n=2 Tax=Bacteria RepID=C3RQ42_9MOLU Length = 260 Score = 95.8 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 39/270 (14%), Positives = 84/270 (31%), Gaps = 26/270 (9%) Query: 2 NGLLRIRQRYQGLAQSD---KKLADYLLLQPDTARHLSS-QQLANEAGVSQSSVVKFAQK 57 + +++ SD +A +L D + +S Q A+ SQSS+ +F+Q Sbjct: 3 GFIYKLQNIVNTSPDSDDTNINIARCILKNIDKIKKRTSLQDFADICYTSQSSISRFSQY 62 Query: 58 LGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 LGY F K ++ + Q E+ + I + + + + M T Sbjct: 63 LGYANFNDFK---ADCIGIQEETDEMIIDTRATKKINCVDYAQAISESLVR-MQET--SI 116 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 +E + + + +A+RI + G + ++ G + + Sbjct: 117 DQE-IEQLCEYIHNAKRIFIFATHIPGDLGCIMQRAILTTGKFIEFYPRKEHQMEVAKQI 175 Query: 178 SPDDLLLAISYTG-----VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA 232 DDL + +S G + + IT ++ + + Sbjct: 176 RRDDLCIFLSLEGTLLMEKAITIPAIISLAKN-----VLITQNVHIKFSEQFTQVIGLGG 230 Query: 233 EEQATNSASISACHAQGMLTDLLFIALIQQ 262 + + + D L + Sbjct: 231 HDSESIG-----KYKLLFFIDCLLNRYYHK 255 >UniRef50_D0ZGM2 Sugar isomerase (SIS) n=5 Tax=Enterobacteriaceae RepID=D0ZGM2_EDWTE Length = 206 Score = 95.8 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 65/162 (40%), Gaps = 3/162 (1%) Query: 104 KENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 162 + +A + E+ + + L R +I+++G+G SG+ A+ A L + A Sbjct: 13 QIYSAELTQLAQRLDAEQWQQLLDRLSGCRGKIMVSGVGTSGIAARKVAHMLACVERPAI 72 Query: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222 + A + DDL++ IS G EL + G ++A+T +A+ + Sbjct: 73 YLNATDAAHGDLGFLRGDDLVILISRGGNSEELTRLLPALQAKGVPLIAVTENPRSAIAR 132 Query: 223 RASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQ 262 A L T E N + ++ L D L+Q+ Sbjct: 133 AAQLTLATGVQREIDPLNMLATTSIILVLALFDAACACLMQR 174 >UniRef50_Q2GAE9 KpsF/GutQ family protein n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2GAE9_NOVAD Length = 340 Score = 95.8 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 3/146 (2%) Query: 122 LHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 V++L S R+ ++G+G SG VA+ A L G A + + A+ + P Sbjct: 50 FDAAVSLLHSGGGRVFVSGVGKSGHVARKIASTLSSTGRPACFIHPVEAMHGDLGMLCPG 109 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA--EEQATN 238 D+L+ +S +G EL D R+ +++AI + L + A L E N Sbjct: 110 DVLIVLSNSGASMELRGLVDHAQRLSARIVAIGARPDSPLMRVADIALVIPDGPEACPVN 169 Query: 239 SASISACHAQGMLTDLLFIALIQQDL 264 A ++ L D L +A++ Sbjct: 170 IAPTTSTTMMLALGDALAVAVMSARG 195 >UniRef50_A8IPW3 Sugar isomerase n=58 Tax=Bacteria RepID=A8IPW3_AZOC5 Length = 354 Score = 95.8 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 3/148 (2%) Query: 120 EKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 E V + A+ R+I+TG+G SG VA+ A L G A V A + + Sbjct: 65 EAFEAAVATILGAKGRVIVTGMGKSGHVARKIAATLASTGTPAHYVHPAEASHGDLGMVA 124 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQ-A 236 P+D+++ +S++G EL D LR ++AIT +AL + A L + E Sbjct: 125 PEDVIIGLSWSGETAELRDIVDYALRFDVPLIAITSNRESALARAARVVLALPLSPEACP 184 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDL 264 A ++ Q + D L +AL++ Sbjct: 185 LGLAPTTSTLMQLAMGDALAVALLESRG 212 >UniRef50_A3DPP9 Glutamine--fructose-6-phosphate transaminase n=11 Tax=Thermoprotei RepID=A3DPP9_STAMF Length = 608 Score = 95.8 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 29/190 (15%), Positives = 72/190 (37%), Gaps = 8/190 (4%) Query: 98 VGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLM-K 156 + +++ + + + T ++ E+ L ++ A+ + + G G S ++ Sbjct: 262 MLKEIYEIPDSMIKTTYSLM-EKYLRLAAMIIYGAKNVYVIGNGTSLHAGMVSSYYFTDL 320 Query: 157 IGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT 216 N V ++ S +++AIS +G ++ + + G ++ +T Sbjct: 321 ANINVNVVSAAEFPYYALKNVSTGTVIIAISQSGETSDVIKSVKLAKQYGAVIIGVTNVV 380 Query: 217 PNALQQRASHCLYTIAEEQ---ATNSASISACHAQGMLTDL--LFIA-LIQQDLELAPER 270 + L ++ L A + +S+ A +L L+ L Q + E+ Sbjct: 381 GSRLSLESNVYLPIGAGPELAVPATKTFVSSLVALALLAGYTGLYTGKLSQTEYVGITEK 440 Query: 271 IRHSEALVKK 280 IR + ++K Sbjct: 441 IRETAKELRK 450 >UniRef50_D1TFW4 Putative transcriptional regulator, RpiR family n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TFW4_9BURK Length = 302 Score = 95.4 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 42/294 (14%), Positives = 85/294 (28%), Gaps = 24/294 (8%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 + R+ L + K++A Y+L D ++ Q+A +AG S SV +F + +GY+ L Sbjct: 9 VEARFAELTPTSKRVASYMLANLDRLGLETADQIAQQAGTSGISVGRFLRSVGYRNLDDL 68 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPL-----------------RLVGEKLIKENTAA 109 K L + D + ++ A Sbjct: 69 KRELRGTQQRPWLITDRLDAFRRGPSDSTQAGEPHEPDVADGASPRDATLAQSLELEIGA 128 Query: 110 MYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA 169 + + + +A + + GI ++ ++ F L + M Sbjct: 129 IQHVYELARSPAFARVAERIANADAVYILGIQSTRGISNAFYSYLEYLRPRVFYSDGMSG 188 Query: 170 LLATVQASSPDDLLLAISYTG-VRRELNLAADEMLRVGGKVLAITGFTPNALQQRAS-HC 227 S L ++ T R G +T + Sbjct: 189 SYVDSLNSEFSTPYLIVTDTRAYSTIARRYCQAASRRGLPFALVTDIY-CPWARDFDGDL 247 Query: 228 LYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 L + + L +LL A++++ ER+ + L + Sbjct: 248 LQVKTDVGQFWD----SLAPLTCLFNLLISAVVERRGPAIDERVARNRELQSEF 297 >UniRef50_Q2RYH6 KpsF/GutQ n=64 Tax=Proteobacteria RepID=Q2RYH6_RHORT Length = 366 Score = 95.4 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 7/151 (4%) Query: 121 KLHECVTMLRS--ARR---IILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQ 175 + +L A+R +I++G+G SG VA A L G + V A + Sbjct: 73 AFTAAIDLLCDGPAKRSGKVIISGMGKSGHVAAKIAATLASTGTPSFFVHPAEASHGDLG 132 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASH--CLYTIAE 233 D ++A+S +G EL R+G +++ITG P+AL A L + E Sbjct: 133 MIGRSDAVIALSNSGETPELADMVAYTRRMGIPLISITGRHPSALSDAADVALVLPALTE 192 Query: 234 EQATNSASISACHAQGMLTDLLFIALIQQDL 264 A ++ A L D L +AL+++ Sbjct: 193 ACPHGLAPTTSTTAMMALGDALAVALLERRG 223 >UniRef50_C6X0T7 Arabinose 5-phosphate isomerase n=2 Tax=Flavobacteriaceae RepID=C6X0T7_FLAB3 Length = 319 Score = 95.4 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 69/177 (38%), Gaps = 4/177 (2%) Query: 91 GDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQN 149 ++ + I+ + + N + V ++ S++ ++I+ GIG S V Sbjct: 2 NNEEILRTARTAIETEISELENLKNRLD-ASFLKAVEIINSSKGKLIVVGIGKSAHVGNK 60 Query: 150 FAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKV 209 L G + + AL + D++L IS +G E+ + + Sbjct: 61 IVATLNSTGTPSQFLHASEALHGDLGVIQKSDVVLCISNSGNSPEIVNLLTYLKGYSSAL 120 Query: 210 LAITGFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQDL 264 + +TG + L + + L T E++ A S+ Q L D+L + L++ + Sbjct: 121 IGMTGNLNSKLAEISDVVLNTSVEKEACPIKLAPTSSTTVQMALGDVLAVCLMEING 177 >UniRef50_A8TDJ4 Glucosamine--fructose-6-phosphate aminotransferase, isomerizing n=2 Tax=cellular organisms RepID=A8TDJ4_METVO Length = 629 Score = 95.1 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 23/167 (13%), Positives = 57/167 (34%), Gaps = 6/167 (3%) Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA 176 S+E++ + M+ +I + +G S + K+G D L Sbjct: 306 ISQEEIQKLAGMINDCDKIYVIAMGTSLHAGMIAEYWFSKLGKLVI-PCDSSEFLIK-GI 363 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 L++ I+ +G + A G K ++ + + + + + Sbjct: 364 IDEKTLVVGITQSGETYDTIKAIKYAKNKGAKTASLVNVIGSTATRESDVTIMIGS-GLE 422 Query: 237 TNSASISACHAQGMLTDLLFIAL---IQQDLELAPERIRHSEALVKK 280 + + +Q ++ LFI I +++E+ + + + K Sbjct: 423 ISVCATKTFMSQLVILYRLFIEYGKLINKNMEVYEKELEKIPKYISK 469 >UniRef50_A6M3A2 Transcriptional regulator, RpiR family n=3 Tax=Clostridium RepID=A6M3A2_CLOB8 Length = 237 Score = 95.1 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 95/253 (37%), Gaps = 31/253 (12%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L++ +K + + + + +A E VS+++++K ++KLGY G+ + + Sbjct: 6 NLSELEKIILNKIHEHISKNERVGINGVAQECFVSKAAIIKLSKKLGYSGYSEMYYTI-- 63 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 LAS + + N I + + + + + L SE Sbjct: 64 -LASTNNALKLDFSNNI-----VSTYESETLTIHVNMLVELLREYSE------------- 104 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVR 192 +RI L +G + + KL+ GF+A + + + L +SY+G R Sbjct: 105 KRIYLDSLGFCDSAKEYYLQKLLSFGFDA-----ASSYHYEAFSKNKSGLYFFLSYSGAR 159 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI---AEEQATNSASISACHAQG 249 E+ + + KV+A T + L + A + ++++ ++ Sbjct: 160 SEVLEKVNVAIENNFKVVAFTSTKDSPLGKIAHMTIEVAGTKSDKEHYLPNFFTSNL--I 217 Query: 250 MLTDLLFIALIQQ 262 +L +L + Sbjct: 218 ILLELALSKYSNK 230 >UniRef50_B0RAL7 6-phospho-3-hexuloisomerase n=3 Tax=Micrococcineae RepID=B0RAL7_CLAMS Length = 203 Score = 95.1 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 64/169 (37%), Gaps = 5/169 (2%) Query: 79 ESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILT 138 + + + + EN A + +L E ++R RR+ Sbjct: 2 TNSTPDPRPTGDAPVDVATALTLIADENARVARALAEPDLAARLDEAARVIRDGRRVFAL 61 Query: 139 GIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLA 198 G G SGL + A + M +G +A V + + D+LL S +G + A Sbjct: 62 GAGRSGLALRMTAMRFMHLGLDAHVVGEATSPAIA-----EGDVLLVASGSGTTAGIVAA 116 Query: 199 ADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHA 247 A VG +++A+T + L A + A + + ++SA +A Sbjct: 117 AQTAHDVGARIVALTTADDSPLADLADVTVLIPAAAKQDHGGTVSAQYA 165 >UniRef50_Q3JP70 Arabinose-5-phosphate isomerase n=5 Tax=Proteobacteria RepID=Q3JP70_BURP1 Length = 351 Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 67/171 (39%), Gaps = 4/171 (2%) Query: 97 LVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLM 155 ++ + A+ + S + + V + + R+++ G+G SG++ + A Sbjct: 48 DSARQVFDIESRALASLSARVS-DSFGDAVDAILRSSGRVVVCGMGKSGIIGRKIAATFA 106 Query: 156 KIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGF 215 G + + A + + D LAISY+G E+ + ++A+TG Sbjct: 107 STGTPSFFMHPGEAYHGDLGMVTSADTFLAISYSGETDEVIKLIPFLKSNRNYLVALTGN 166 Query: 216 TPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQDL 264 + L Q A L E++ A S+ A + D L + L++ Sbjct: 167 ARSTLAQAAHSHLDAGVEQEACPLQLAPTSSTTAALAMGDALAVTLMKARG 217 >UniRef50_A3CVN6 Hexulose-6-phosphate isomerase n=6 Tax=Methanomicrobiales RepID=A3CVN6_METMJ Length = 211 Score = 94.7 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 67/152 (44%), Gaps = 5/152 (3%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG 158 + +++ + +V S++++ + + +A RI G G SGLVA++FA +LM +G Sbjct: 18 VKNMMRLMATKIRTIADVMSDDEIDTLLAEILNANRIYTMGAGRSGLVAKSFAMRLMHLG 77 Query: 159 FNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPN 218 +A V + P D+++ S +G + + ++ +GG++ IT + Sbjct: 78 LSAFVVGETVTPAM-----KPGDVIIVFSGSGATKTVADISETAKEIGGRICLITSKKDS 132 Query: 219 ALQQRASHCLYTIAEEQATNSASISACHAQGM 250 + + A + ++ S Q M Sbjct: 133 RIGRIADCIVIIESQRDKVADESAEFEIRQMM 164 >UniRef50_C9B1X5 Putative uncharacterized protein n=2 Tax=Enterococcus casseliflavus RepID=C9B1X5_ENTCA Length = 266 Score = 94.3 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 42/253 (16%), Positives = 78/253 (30%), Gaps = 14/253 (5%) Query: 23 DYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPS 82 ++L + LA VS SSV +F +K+G++ F LKL + + + Sbjct: 26 KFILCHLKEIHKYNISDLAKACCVSNSSVSRFCRKIGFQNFNELKLQFFQYTNTAEKKFF 85 Query: 83 VPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGA 142 P D I + LH + + + G Sbjct: 86 YPGVQCSNFKDSY-------IDGIIENLLLLKESICVTDLHRLAEDIVNYPNVAAFGSLH 138 Query: 143 SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVR--RELNLAAD 200 S NF L+ G L ++ + + L++ S G R L Sbjct: 139 SQSAVLNFQTDLLSSGIVMDTRICFQEQLEYMEQADCNTLIVLFSRGGSHLKRFLLHHLQ 198 Query: 201 EMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALI 260 R K++ IT A + +Y +E + +A + +L + + Sbjct: 199 LSKRKRPKIVMITANKNLASNKYIDQFIYYDEKE-----GFTAYPYAVEAIKGVLVLEVY 253 Query: 261 QQDLELAPERIRH 273 + + +R Sbjct: 254 RLVKQKKIINLRK 266 >UniRef50_C3RK04 Predicted protein n=2 Tax=Bacteria RepID=C3RK04_9MOLU Length = 260 Score = 94.3 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 38/244 (15%), Positives = 94/244 (38%), Gaps = 20/244 (8%) Query: 21 LADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPES 80 +A Y++ ++++ + + +E VS++SV +F + G+ + + L + + + Sbjct: 24 IARYIIKNYSYCQNITLKDIMDECYVSRASVTRFCEYFGFHSWNNFQSFLVKTKKVKEQQ 83 Query: 81 PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGI 140 + + + + L N +E ++ V ++ + RI L G Sbjct: 84 IESRF-----SNIDIESIYDHLCYIAKNDSLEFKNNLKKE-INALVEIINQSSRIYLFGA 137 Query: 141 GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVR-----REL 195 +A +F ++ IG D + ++ + DDL + ++ +G + Sbjct: 138 VYPLSLAVDFQINMISIGKTV--YSDFQSESDYLEPMNEDDLAIILTASGRYVGECKSKF 195 Query: 196 NLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLL 255 NL + + V++ ++L Q +H LY + + ++ DL+ Sbjct: 196 NLICNNAGKK--AVIS-CSNRYSSL-QYINHYLYIPTTNKNSFVDFDYYTI---LILDLI 248 Query: 256 FIAL 259 +I Sbjct: 249 YIEY 252 >UniRef50_A9A435 Glucosamine--fructose-6-phosphate aminotransferase, isomerizing n=4 Tax=Thaumarchaeota RepID=A9A435_NITMS Length = 586 Score = 94.3 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 52/157 (33%), Gaps = 3/157 (1%) Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ +R A+ I +TG G S A L K L + Sbjct: 273 EIEAATDYIRQAKNIYITGSGTSYNSALIAKQILSKYVKIKTESIMSSELQFDPNIIEEN 332 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHC--LYTIAEEQATN 238 +L+AIS +G ++ A K++AI ++L + A L E Sbjct: 333 SILIAISQSGESADVLEAVKIAKNANCKIIAIVNLVTSSLAREADVVIGLNCGPEIGVAA 392 Query: 239 SASISACHAQGM-LTDLLFIALIQQDLELAPERIRHS 274 + S ++ + L I + E + I + Sbjct: 393 TKSFTSQLVILYKIVQKLSNNDITINFEDFSKSISKT 429 Score = 47.3 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 18/131 (13%), Positives = 49/131 (37%), Gaps = 20/131 (15%) Query: 98 VGEKLIKENT--------AAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQN 149 + +KL + ++ TL+ + + + L+ I + G G + +A Sbjct: 406 IVQKLSNNDITINFEDFSKSISKTLD--NPTNIQKIAKELKEISDIYILGRGINYPIATE 463 Query: 150 FAWKLMKIG-FNAAAVRDMHALLATVQASSPDDLLLAI-----SYTGVRRELNLAADEML 203 A KL ++ +A + + + ++ + +Y+ + +A E+ Sbjct: 464 SALKLKELTYIHAEGIAGGELKHGPLALMDSNVFVIILNPNDSTYS----DTLTSAREIK 519 Query: 204 RVGGKVLAITG 214 G K++ ++ Sbjct: 520 ARGAKIIGVSD 530 >UniRef50_D2R6F2 KpsF/GutQ family protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R6F2_9PLAN Length = 365 Score = 94.3 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 37/174 (21%), Positives = 65/174 (37%), Gaps = 4/174 (2%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAW 152 + ++ + A+ V ML R +IL+G+G +GL+A Sbjct: 16 DPLQLARTVLLSESDAIAGLATRLDHH-FVSAVKMLLDCRGSLILSGMGKAGLIASKLTA 74 Query: 153 KLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAI 212 G + V A+ + + D++L +SY+G E+ + G ++AI Sbjct: 75 TFASTGTRSHFVHPAEAIHGDLGRIAEGDVVLMLSYSGETEEITRILPMLRDFGASIIAI 134 Query: 213 TGFTPNALQQRASHCLYTI--AEEQATNSASISACHAQGMLTDLLFIALIQQDL 264 TG + L + A+ L E A ++ A L D L I + Q Sbjct: 135 TGQPSSTLARAATVVLDLGRITEACPLGLAPSTSTAAMLALGDALAIVVSQSRG 188 >UniRef50_D1AIY1 KpsF/GutQ family protein n=11 Tax=Fusobacteriaceae RepID=D1AIY1_SEBTE Length = 319 Score = 93.9 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 37/174 (21%), Positives = 75/174 (43%), Gaps = 4/174 (2%) Query: 93 DPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFA 151 D +++ + + + E + V M+ + ++++TGIG SG + + + Sbjct: 2 DKSLTEAKRVFEAEIEELVKVKDRLD-ENFSKMVDMIYESSGKVVITGIGKSGHIGKKIS 60 Query: 152 WKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLA 211 L G N+ + AL + D++LAIS +G E++ + R+G ++A Sbjct: 61 ATLASTGTNSVFINAAEALHGDLGVIKKGDIVLAISNSGNSDEISNILPSVRRIGADIIA 120 Query: 212 ITGFTPNALQQRAS--HCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQD 263 TG +AL + A + E A +++ ++ D L AL+Q+ Sbjct: 121 FTGNKISALGKEADLIINIAIDKEACPMGLAPMTSATVTLVMGDALAAALMQKR 174 >UniRef50_B1CBZ6 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CBZ6_9FIRM Length = 203 Score = 93.9 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 38/162 (23%), Positives = 71/162 (43%), Gaps = 5/162 (3%) Query: 100 EKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIG 158 +K+I+ + ++ + + V M+ + +IILTG G SGL+++ A L G Sbjct: 11 KKVIEMERYELGRLMDSLD-DNFVKAVDMITECKGKIILTGTGKSGLISRKIAATLCCTG 69 Query: 159 FNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAA-DEMLRVGGKVLAITGFTP 217 A + + + A P+DL++AIS +G L +G K + +TG T Sbjct: 70 KPAFFLSAYNCENGDIGAIQPNDLIIAISNSGETTILKELVIPSAKTIGAKAICLTGNTE 129 Query: 218 NALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFI 257 + L + LY E++ T + ++ + D L + Sbjct: 130 STLAKLCDVALYIGVEKEACPTGVNATTSTTNTLAMGDALAM 171 >UniRef50_Q1ZIS3 GutQ protein n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZIS3_9GAMM Length = 318 Score = 93.9 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 37/164 (22%), Positives = 71/164 (43%), Gaps = 4/164 (2%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA-RRIILTGIGASGLVAQNFAWKLMKI 157 + K + A+ A E L + +++S RII+ G+G SG + + + L + Sbjct: 14 VRNVFKIQSDALDAHRKGLGTEYLD-ALDLMKSCTGRIIVCGMGKSGHIGKKISATLASV 72 Query: 158 GFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTP 217 G + + A + + +DLLL ISY+G E+ + G K+++ITG Sbjct: 73 GTPSFFMHPGEAFHGDLGMITTEDLLLLISYSGETDEVLKIIPSLQHFGNKIISITGAKD 132 Query: 218 NALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIAL 259 + L + + L +++ N A ++ ++ D L L Sbjct: 133 STLAKNSDVVLVAAIQKETCPINLAPTTSTTLTLVIGDALSSVL 176 >UniRef50_Q96XH0 581aa long hypothetical glucosamine--fructose-6-phosphate aminotransferase n=1 Tax=Sulfolobus tokodaii RepID=Q96XH0_SULTO Length = 581 Score = 93.9 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 26/216 (12%), Positives = 77/216 (35%), Gaps = 4/216 (1%) Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 K+ ++ + + +++ + + + ++ E+ L Sbjct: 212 FKIFNTQGEVNGELKRVKYKEEIADKGGFSHFMLKEIYDIPLSLINSVNSLM-EKYLSLA 270 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 ++ +AR++ + G+S ++ L + N V + + +++A Sbjct: 271 SMIIANARKVYIIANGSSLHAGYISSYYLHDVSLNV--VSAAEFPYYALDNITTGTVVIA 328 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 IS +G ++ + + G +L IT + L ++ L A + Sbjct: 329 ISQSGETSDVIRSVKLAKQRGAVILGITNSVGSRLALESNVYLPITA-GPELAVPATKTF 387 Query: 246 HAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + ++ +L + Q ++ + I H + +++L Sbjct: 388 TSTIIVLKILSDYVSYQLGKIDKKDIDHDKNEIQRL 423 >UniRef50_C2DAD6 3-hexulose-6-phosphate isomerase n=2 Tax=Enterococcus faecalis RepID=C2DAD6_ENTFA Length = 192 Score = 93.9 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 69/182 (37%), Gaps = 10/182 (5%) Query: 101 KLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFN 160 K E + N S++++ ++ A I L G G SGL+ + FA +L+ +G++ Sbjct: 15 KFFNEIIDEVLTIGNEISDQQVDRMTKAIQGANHIFLAGAGRSGLMIRAFANRLLHLGYS 74 Query: 161 AAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNAL 220 + V + + + DL L S +G L A G + T + + L Sbjct: 75 VSLVGE-----ISSPHTKSGDLFLIGSGSGETTSLVNQAKIAKDNGVVIGLFTTNSSSTL 129 Query: 221 QQRASHCLYTIAEEQATNSAS---ISACHAQ--GMLTDLLFIALIQQDLELAPERIRHSE 275 + A + + + + + + + Q L D + + L+++ E Sbjct: 130 GEIADQVVIIPTQSKQSKDEALQPMGSLFEQTSLFLYDSIILNLMEKTGETNQTMKTRHA 189 Query: 276 AL 277 L Sbjct: 190 DL 191 >UniRef50_B4U6U7 KpsF/GutQ family protein n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6U7_HYDS0 Length = 319 Score = 93.9 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 78/162 (48%), Gaps = 4/162 (2%) Query: 103 IKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNA 161 I + A+ + +E+ + + ++ ++ ++ILTG+G SG +A+ A + +G A Sbjct: 12 ISKEIEAVEGLKLLINED-FEKAIYVIHRSKGKVILTGVGKSGHIARKIASTMASVGTPA 70 Query: 162 AAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQ 221 + AL + S +D++LA+S +G E+ + +G ++++T + L Sbjct: 71 VFLHPNEALHGDLGIISKEDVVLALSNSGESAEILYMIPYIKMMGCFLISVTNNKNSTLA 130 Query: 222 QRAS--HCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQ 261 +++ L E N A S+ A +L D + ++L++ Sbjct: 131 KQSDISIVLNIEKEACPLNLAPTSSTTAMLVLGDAMAMSLLR 172 >UniRef50_B6W753 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6W753_9FIRM Length = 135 Score = 93.5 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 55/141 (39%), Gaps = 34/141 (24%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I++ + Q+D +AD+L+ + LS +LA + S++S+++F QK+G+ Sbjct: 1 MKLEELIKKNKEKFTQTDLAIADFLMDNKNDELDLSINELAKKCLTSRTSILRFTQKIGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ K L + ++ + ++ Sbjct: 61 GGYSEFKYFLKQKDHTKKDQTKE----------------------------------DDK 86 Query: 121 KLHECVTMLRSARRIILTGIG 141 KL++ + L + I + G G Sbjct: 87 KLNQILESLDKSNNIFIYGNG 107 >UniRef50_Q3B0E2 KpsF/GutQ n=16 Tax=Cyanobacteria RepID=Q3B0E2_SYNS9 Length = 342 Score = 93.5 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 76/178 (42%), Gaps = 8/178 (4%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTML-----RSARRIILTGIGASGLVAQ 148 + + ++E +A+ S E++ + +L R A+ + +TG+G SG+VA+ Sbjct: 13 SVLSALTRCLQEEASAISTAAERLSSEQVEAAIQLLERCADRKAKLV-ITGVGKSGIVAR 71 Query: 149 NFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGK 208 A IG A + + AL + +P+D+ L +S +G EL + R G Sbjct: 72 KIAATFSSIGLMALYLNPLDALHGDLGVVAPEDVCLMLSNSGETTELLEVLPHLKRRGTG 131 Query: 209 VLAITGFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQDL 264 +AI G ++L + + L + + N A ++ + D L +++ Sbjct: 132 RIAIVGRAESSLGRGSDVVLEASIDREVCPLNLAPTASTAVAMAIGDALAAVWMERRG 189 >UniRef50_Q1CZW3 GutQ protein n=6 Tax=Cystobacterineae RepID=Q1CZW3_MYXXD Length = 352 Score = 93.5 bits (232), Expect = 8e-18, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 67/169 (39%), Gaps = 4/169 (2%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKI 157 +++ A+ + V ++R R ++I+TG+G +G + Q + L Sbjct: 38 ARSVLEAEARAILGVTERL-GDDFLRAVQLVRDCRGQVIVTGMGKAGHIGQKLSATLAST 96 Query: 158 GFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTP 217 G + + A+ + D++LA+S +G EL R+ V+A+TG Sbjct: 97 GIRSVYLHPAEAVHGDLGRVGRGDVILALSNSGSTEELIRLLPSFKRMETPVIALTGDAK 156 Query: 218 NALQQRASHCLYTI--AEEQATNSASISACHAQGMLTDLLFIALIQQDL 264 + L + A L AE ++ A + D L + +++ Sbjct: 157 SPLGRGADVVLDIGAIAEACPMGLVPTASTAALHAIGDALAMTVLRSRP 205 >UniRef50_B6BVE7 Arabinose 5-phosphate isomerase n=1 Tax=beta proteobacterium KB13 RepID=B6BVE7_9PROT Length = 326 Score = 93.5 bits (232), Expect = 8e-18, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 71/177 (40%), Gaps = 4/177 (2%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKI 157 +K++ + + + + + L + RIIL+G+G SG +A A L Sbjct: 15 AKKVLDIESIEINNAQKFID-DNFADIIIKLSECKGRIILSGMGKSGHIAGKIASTLSST 73 Query: 158 GFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTP 217 G A + A + + DD+++ +S +G E+ + R+G ++AIT Sbjct: 74 GSPAFFMHPGEASHGDLGMITHDDIVIFLSNSGESDEIYNLIPSIKRIGASIVAITSNEK 133 Query: 218 NALQQRASHCLY--TIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIR 272 + + + A H + E A ++ + D + ++L Q + ++ Sbjct: 134 SEIAKYADHHISSKVSTEACPLGLAPTASSALMLAIGDAIAVSLFQLKGFTTEDFLK 190 >UniRef50_A3ZL92 Putative uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZL92_9PLAN Length = 363 Score = 93.1 bits (231), Expect = 9e-18, Method: Composition-based stats. Identities = 36/171 (21%), Positives = 69/171 (40%), Gaps = 4/171 (2%) Query: 90 RGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQ 148 + + G +I++ AA+ A + + + ++ II+TG+G +GL+ Q Sbjct: 12 TPQEEVLRFGRTIIQQEAAALSAIAERLD-ARFGQALDLVMQCPGDIIVTGMGKAGLIGQ 70 Query: 149 NFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGK 208 A G + + A+ + D++LA S +G E+ + +G + Sbjct: 71 KIAATFASTGTPSHFLHPAEAIHGDLGRVDEKDVVLAFSQSGETDEIVRLIPCLKSLGAQ 130 Query: 209 VLAITGFTPNALQQRASHCLYTI--AEEQATNSASISACHAQGMLTDLLFI 257 ++A+T N L + A L E A A ++ A L D L + Sbjct: 131 IVAVTANENNTLARAAKIVLPLGPIVEAGANRLAPSTSTAAMLALGDALAL 181 >UniRef50_Q2FSA6 Hexulose-6-phosphate isomerase n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FSA6_METHJ Length = 194 Score = 93.1 bits (231), Expect = 9e-18, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 5/130 (3%) Query: 107 TAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD 166 + + ++++ ++ L SA RI + G G SG VA++FA +LM +G + V + Sbjct: 5 ISRIGEIAETLRQDQVDCFISALMSADRIFVIGAGRSGFVAKSFAMRLMHLGLTSYVVGE 64 Query: 167 MHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASH 226 + +D L+A S +G + + A + ++GG++ ITG + + + A Sbjct: 65 T-----VTPSFHKNDTLIAFSGSGKTKSVMEACETTRQIGGQICLITGTRVSPMAELADC 119 Query: 227 CLYTIAEEQA 236 + EE++ Sbjct: 120 VVLLDTEEES 129 >UniRef50_Q1RR96 Putative 6-phospho-3-hexuloisomerase n=1 Tax=Streptomyces ambofaciens ATCC 23877 RepID=Q1RR96_STRAM Length = 202 Score = 93.1 bits (231), Expect = 9e-18, Method: Composition-based stats. Identities = 41/192 (21%), Positives = 72/192 (37%), Gaps = 15/192 (7%) Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR 133 + Q P+ P + D PL +++E A + E++ E + + A+ Sbjct: 1 MVDQQNQPAPPAPLTVGVDGPLAAARRTILREIEALLTRAR----EDQAQELMQAVYGAQ 56 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRR 193 RI++ G G S L FA +LM +G A D T A + DLL+A S +G Sbjct: 57 RIMVLGAGRSKLAVDAFAMRLMHLGLTAHVSTD-----VTCPAIAEGDLLVACSGSGHTP 111 Query: 194 ELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGM--- 250 + + + G ++ +T + L A ++ Q + + Sbjct: 112 TVVQRTEAAKQAGARIAVVTANQESPLAALADIRVHLAEYSQDFEPDASTQFVGTLFEQG 171 Query: 251 ---LTDLLFIAL 259 D L +AL Sbjct: 172 ALVFFDCLILAL 183 >UniRef50_C8W8B6 Sugar isomerase (SIS) n=13 Tax=Bacteria RepID=C8W8B6_ATOPD Length = 202 Score = 93.1 bits (231), Expect = 9e-18, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 68/170 (40%), Gaps = 6/170 (3%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR----RIILTGIGASGLVAQNFAWKL 154 ++ + +++ + E L ++ A R+ +TGIG G V+ A Sbjct: 8 VQEFLSIVGKSLHQYVENIDFEALSAAKKLILDAEAKGGRLHVTGIGKPGHVSGYAASLF 67 Query: 155 MKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITG 214 G + + + + P D+++AIS +G EL + VG ++A+TG Sbjct: 68 SSTGTPTYELHGTECVHGSAGQTRPGDVVIAISNSGETGELKATVTCLKNVGVHIIALTG 127 Query: 215 FTPNALQQRASHCLYTIAEEQATNSASISACHAQGM-LTDLLFIALIQQD 263 + L A L EQ +S + + + +L ++++ Q+ Sbjct: 128 NPNSWLANEAEVALIAGV-EQEGDSMNKPPRASILAEIMELQCLSILLQN 176 >UniRef50_A1RWB5 Glutamine--fructose-6-phosphate transaminase n=11 Tax=Thermoprotei RepID=A1RWB5_THEPD Length = 613 Score = 93.1 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 70/203 (34%), Gaps = 11/203 (5%) Query: 88 QIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVA 147 ++ + K I E + T+ + +L A I + G S + Sbjct: 254 ELARKEGFPHYMLKEIHEQPRVIAETIRGFGPD-YERGAELLSDAEVIYVVASGTSYHAS 312 Query: 148 QNFAWKLMKI-GFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVG 206 FA MKI G + +S D LLA+S +G + +A G Sbjct: 313 LYFALLTMKIAGKKVIPLISSEYAGYVSS-ASERDALLAVSQSGETIDTLMAMRAFKERG 371 Query: 207 GKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALI------ 260 + +++T + + + + H +Y A A+ Q L + Sbjct: 372 VRTVSLTNVIGSVISRESDHQVYMKA-GPEIGVAATKTFTVQLTALTWLSALIARNVGAM 430 Query: 261 -QQDLELAPERIRHSEALVKKLV 282 ++D E ER++ L +K++ Sbjct: 431 DEKDAESLLERMKKIPDLAEKVI 453 >UniRef50_C0BZ30 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BZ30_9CLOT Length = 243 Score = 93.1 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 83/259 (32%), Gaps = 28/259 (10%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 L + +K++ + L L+ + L A G S S + K +KLG+ + ++ Sbjct: 7 DNLNEFEKRILETLNLECKKNKKLRIINAAELCGCSTSKISKTVKKLGFNNYKQYVNFIN 66 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 + + EK + L+ + + + +L Sbjct: 67 DEY-----------------------IPEKPASNEFDRIRDFLDNFDLTMVDKFIELLDK 103 Query: 132 ARRIILTGIGASGLVAQNFAWKLMK-IGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 +I+L G G S AQ +KL I + D + LL+ S TG Sbjct: 104 HDKILLFGYGPSLFCAQYLEFKLRLFINKTVITITDE---FSAASLIDEKTLLIIFSATG 160 Query: 191 VRRELNLAADEMLRVGGK-VLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQG 249 + GG +L I + +AL T + T + Sbjct: 161 GFSSFDNLKKIAREKGGDLLLLIEEYNTSALSDDCQVLFLTDTFQTFTTVPYQKSRIVFF 220 Query: 250 MLTDLLFIALIQQDLELAP 268 + + + +I+++ A Sbjct: 221 IFIEEVIQHIIKRNENNAV 239 >UniRef50_C3HBK2 Glucosamine--fructose-6-phosphate aminotransferase n=1 Tax=Bacillus thuringiensis serovar huazhongensis BGSC 4BD1 RepID=C3HBK2_BACTU Length = 375 Score = 92.7 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 78/190 (41%), Gaps = 8/190 (4%) Query: 96 RLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLM 155 + E++ + E++ E V ++ RR+ +TG G S VA + Sbjct: 23 EEICEQV--RYLNNLNNCF--IDNEQIIEIVNQIKYCRRVFITGCGTSYHVALTSEYISR 78 Query: 156 KIGFNAAAVRD--MHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 I + +R L+ S +D+++A+S++G + A + + V K + IT Sbjct: 79 MIFKDVNLIRSVPAFELIHHPWNISSEDVVIAVSHSGETTMVLKALENVRAVKAKTILIT 138 Query: 214 GFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAP-ERIR 272 GF ++ Q+A H + + + + +IS + G + LF L + I+ Sbjct: 139 GFPESSAAQKADHVISNGYPFEKSLAHTISYTVSIGAIL-SLFYELSKYYGVKNISSNIK 197 Query: 273 HSEALVKKLV 282 + +LV Sbjct: 198 QEFEKISQLV 207 >UniRef50_B9KF21 Arabinose-5-phosphate isomerase n=29 Tax=Bacteria RepID=B9KF21_CAMLR Length = 318 Score = 92.7 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 75/173 (43%), Gaps = 4/173 (2%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAW 152 + +++ + + + + +EE + V ++ S + R +++G+G SG V A Sbjct: 5 DAIKIAKEVFEIESKTILDLCDTLNEE-FSKAVELILSIKGRCVVSGMGKSGHVGAKIAA 63 Query: 153 KLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAI 212 L G + + AL + + +D+LLAIS +G E+ + + ++ + Sbjct: 64 TLASTGTPSFFMHPGEALHGDLGMIASEDVLLAISNSGETEEVLKLIPVIKKRKIPLIVM 123 Query: 213 TGFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQD 263 G + L ++A + +++ A S+ A + D + +AL++ Sbjct: 124 AGDQNSTLAKQADVFINIAVKKEACPLQLAPTSSTTATLAMGDAIAVALMKAR 176 >UniRef50_Q6F0Y2 Putative uncharacterized protein n=1 Tax=Mesoplasma florum RepID=Q6F0Y2_MESFL Length = 260 Score = 92.7 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 43/269 (15%), Positives = 97/269 (36%), Gaps = 23/269 (8%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQ--QLANEAGVSQSSVVKFAQKLGYK 61 L I + L + + DY+ + + +LA A S++ +K+ Sbjct: 8 LSTIEEN--NLTTRELIIVDYIKSNSKQIVEENIKIDELARRAKTGFSAIYNLLKKMNID 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + L+ + I +D E + + + + Sbjct: 66 GYRDFMICLANDVEH--------AELNIAKND------ENVANGYINLIKQNYTLIKKAN 111 Query: 122 LHECVTMLRSARRIIL-TGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASSP 179 L + + ++ S+ RI++ G A + + G N + D ++ ++ + Sbjct: 112 LVKTINLIDSSPRIVICYWEGVLRGPAMDLSNFFYNHGVNVTLLDSDWDSINNRIKNTQT 171 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPN-ALQQRAS--HCLYTIAEEQA 236 +DL + ++ G L+ + + + GK + I+G P+ +++ AS H L E Sbjct: 172 NDLYIFLTKYGTSTHLSKVIEAIRKQKGKSIFISGKVPSKEVEENASLVHTLIVDGVEIN 231 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLE 265 ++ IS DLL + + + Sbjct: 232 DDNVLISKSLPFHYFNDLLIYHYLNSEKK 260 >UniRef50_Q723E8 SIS domain protein n=15 Tax=Firmicutes RepID=Q723E8_LISMF Length = 200 Score = 92.7 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 61/168 (36%), Gaps = 3/168 (1%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA-RRIILTGIGASGLVAQNFAWKLMKI 157 + +E A+ V SEE L + V + +I++ G G SG+ A+ I Sbjct: 10 IHQTWQEEANAISRLPEVTSEEALVKTVEKIAECTGKIVVAGCGTSGVAAKKLVHSFNCI 69 Query: 158 GFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTP 217 A + A+ T+ +D+L+ IS G EL G ++ +T Sbjct: 70 ERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTENPD 129 Query: 218 NALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQD 263 + + + A E N + ++ A D + + L+ Sbjct: 130 SVIAKEADIFFPVSVSKEPDPFNMLATASTMAVIASFDAVIVCLMTYM 177 >UniRef50_Q9F5F9 Riorf33 protein n=1 Tax=Agrobacterium rhizogenes RepID=Q9F5F9_AGRRH Length = 251 Score = 92.4 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 47/265 (17%), Positives = 87/265 (32%), Gaps = 29/265 (10%) Query: 25 LLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVP 84 ++ LSS +LA A VSQ SV +FA LG+ G+ ++ L + Sbjct: 1 MIENSAQLGFLSSMELAELANVSQPSVTRFAVALGFDGYLEMRKFLR--------TAQPG 52 Query: 85 IHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASG 144 G N + +EE + + L ++R + + G+ AS Sbjct: 53 PDVPAEGQSNRYQAALLAEAANLTELAQGFA--NEEAIDQFGKALAASRPLAVLGLRASA 110 Query: 145 LVAQNFAW---------KLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRREL 195 +A FA+ +L+ G + + D + +L RE Sbjct: 111 GLATQFAYFAAKVHPDIRLLASGGS--LIEDQIEQCYAAGGRT----MLVFMMPLYPRET 164 Query: 196 NLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLL 255 A + G K+ +T + A + L + + A L +L Sbjct: 165 LKAVELARNAGMKIALVTDAGFTDHEGIADYLLTPRVNSRLV----FDSHAAASALVSVL 220 Query: 256 FIALIQQDLELAPERIRHSEALVKK 280 ++ A +R+ + K+ Sbjct: 221 LDSMCTNMNGAAQKRLDAIDRSSKR 245 >UniRef50_B2KC19 KpsF/GutQ family protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KC19_ELUMP Length = 329 Score = 92.4 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 77/181 (42%), Gaps = 5/181 (2%) Query: 90 RGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS-ARRIILTGIGASGLVAQ 148 D ++ +++++ + + + V ++ S + R+++ GIG SG++ + Sbjct: 3 NNSDEIKKTAKEVLEVENNELAKSHKSID-GNFIKSVNIINSISGRVVVLGIGKSGIIGR 61 Query: 149 NFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGK 208 A L G A + + AL + D +LA+S++G E++ + + Sbjct: 62 KIAATLASTGTPALFMHPVEALHGDLGMIQTSDAILALSFSGNTEEISKLIPLISKRKLP 121 Query: 209 VLAITGFTPNALQQRASHCL--YTIAEEQATNSASISACHAQGMLTDLLFIALIQ-QDLE 265 V+++TG + L + + + + E N A S+ L D L I L++ + E Sbjct: 122 VISMTGNENSKLAKLSDVHIKMHVSKEACPYNLAPTSSTTVMLALGDALAICLMRLKHFE 181 Query: 266 L 266 Sbjct: 182 K 182 >UniRef50_C1PA35 Sugar isomerase (SIS) n=1 Tax=Bacillus coagulans 36D1 RepID=C1PA35_BACCO Length = 180 Score = 92.4 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 60/164 (36%), Gaps = 15/164 (9%) Query: 115 NVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATV 174 + ++ L + V ++ + R+ L G G S ++ + FA +L+ +GF + D Sbjct: 20 SKVDDQPLEQVVEVIGRSNRLFLAGTGCSEMILRVFANRLVHLGFRVGMIGD-----LIS 74 Query: 175 QASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE 234 D +L S +G L AA + G ++AIT + L + A + E Sbjct: 75 PVPKKGDTILFSSKSGENPVLLNAARKAKLHGINIVAITASPASTLAKMADVTVLLPDES 134 Query: 235 QATNS----ASISACHAQGM------LTDLLFIALIQQDLELAP 268 S + D++ +L+++ Sbjct: 135 SEFESIKQAGLTPDRIGTLFELLSFLIYDVITASLMKKRHPENE 178 >UniRef50_A5IWG2 Hexulose-6-phosphate isomerase n=67 Tax=Staphylococcaceae RepID=A5IWG2_STAA9 Length = 183 Score = 92.4 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 11/171 (6%) Query: 103 IKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAA 162 + + TL+ +E+ V+ + A RI + G G SG VA +FA +L ++G A Sbjct: 8 YQLILDELKGTLSHVKDEEFDGFVSEVTEASRIFIAGKGRSGFVANSFAMRLNQLGKQAF 67 Query: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222 + + DDL + IS +G L L A++ V KV+ +T +A+ + Sbjct: 68 VIGESTTPSIQ-----KDDLFIVISGSGSTEHLRLLAEKAKSVDAKVVLLTTKLDSAIGE 122 Query: 223 RASHC--LYTIAEEQATNS----ASISACHAQGMLTDLLFIALIQQDLELA 267 A L + AT S S+ +Q L ++ + Q D+E Sbjct: 123 IADTVVELPAGTKHDATGSDQPLGSLFEQSSQIFLDSVVIGLMTQLDVEET 173 >UniRef50_B6ARK4 Sugar isomerase, KpsF/GutQ family n=3 Tax=Bacteria RepID=B6ARK4_9BACT Length = 332 Score = 91.6 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 69/168 (41%), Gaps = 4/168 (2%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRS-ARRIILTGIGASGLVAQNFAWKLMKI 157 +++ E + A+ A E V + + ++ +TG+G SG VA+ A L Sbjct: 13 AREVLDEESRALSALSLSMD-EAFSRAVAAILQGSGKVAVTGMGKSGHVARKIAATLSST 71 Query: 158 GFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTP 217 G A + A+ + A D +LA+S +G +E+ + R+ ++++ Sbjct: 72 GTPAFFLHPGEAVHGDLGALDRGDTVLALSKSGETQEILDLLPLLKRIDIPLISMVCERE 131 Query: 218 NALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQD 263 + L + + L E A ++ + L D L + L+++ Sbjct: 132 STLARLSEVTLLIPVTREAGPLGIAPTTSTTSMLALGDALAMVLLEER 179 >UniRef50_C2DAE3 3-hexulose-6-phosphate isomerase n=7 Tax=Enterococcus RepID=C2DAE3_ENTFA Length = 197 Score = 91.6 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 58/151 (38%), Gaps = 5/151 (3%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG 158 + + A + ++ V ++ A I L G G SG+ + FA +LM IG Sbjct: 14 MKNYTLDILAELTQNGQRIDTNEIAHFVEQIKQANHIFLNGAGRSGIAIRAFANRLMHIG 73 Query: 159 FNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPN 218 F+ + V + + S P DLL+ S +G L A++ + G + +T + Sbjct: 74 FSVSIVGE-----ISSPHSKPGDLLIICSGSGETGSLKSLAEKAKQSGIDLALVTMKKES 128 Query: 219 ALQQRASHCLYTIAEEQATNSASISACHAQG 249 + Q A L + N ++ Sbjct: 129 TIGQLADVVLVLPGTTKEENDRETASFAQPM 159 >UniRef50_B0N682 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0N682_9FIRM Length = 266 Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 32/193 (16%), Positives = 73/193 (37%), Gaps = 10/193 (5%) Query: 3 GLLRIRQRYQGLAQ--SDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 L+R+ ++ + +A +LL D ++LS +AN VS+S++ KF + L + Sbjct: 4 LLVRLIDVINEYSEDSTFYSIAYTMLLNFDNLQNLSINDVANLCHVSKSTISKFVRSLNF 63 Query: 61 KGFPALKLA--LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 + + K E + + I I D +K+I++ + Sbjct: 64 EDYSDFKAEAYFKENRFNSDYNYVANIQQYIANQD-ANTYIDKVIQDI-----EIIKNID 117 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 + + ++ ++ G S L A + +KL + + ++ +S Sbjct: 118 MTVIRKIAQIIYQYPKVTAFGTLFSQLGALDLQYKLAYNHKFIMSYVNDVKQDEYLKNNS 177 Query: 179 PDDLLLAISYTGV 191 +++ S +G Sbjct: 178 EQGVVIIYSNSGN 190 >UniRef50_Q1MS86 FOG: CBS domain n=10 Tax=Desulfovibrionales RepID=Q1MS86_LAWIP Length = 360 Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 77/195 (39%), Gaps = 4/195 (2%) Query: 70 LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTML 129 + + + + + + L + +++ + E + +L Sbjct: 14 VRKTMTAIHSYSKKYTESTQTSPEYLLKLAHEVLTIEMDGIETIRERL-GNTFVEALLLL 72 Query: 130 RSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 S + R+I+TG+G SGLV + A G A + + + + DL+L+IS Sbjct: 73 SSCKGRVIVTGVGKSGLVGRKIAATFSSTGTPAFFMHPVEGAHGDIGSLKSSDLILSISN 132 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ--ATNSASISACH 246 +G ELN + G ++A+T + L + A+ L+T ++ A ++ Sbjct: 133 SGETPELNAIVPTIKSFGTPMIALTSVLNSTLAKAANVVLHTEVPKEACPHGLAPTASTT 192 Query: 247 AQGMLTDLLFIALIQ 261 A L D + + L+ Sbjct: 193 AVLALGDAIAVCLMS 207 >UniRef50_C7TGG9 Phosphosugar isomerase n=4 Tax=Lactobacillus RepID=C7TGG9_LACRL Length = 203 Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 64/168 (38%), Gaps = 3/168 (1%) Query: 92 DDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS-ARRIILTGIGASGLVAQNF 150 + + ++ AAM + ++ + + + R++ G+G +G + Sbjct: 2 KENKLDLVHTYMQREIAAMQLIESQINDVQYCSVIDKIMHLTGRLVFMGVGKTGHIGVKL 61 Query: 151 AWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVL 210 A +G A V A+ + + +DL++ IS +G +E + R+G + Sbjct: 62 AATFASLGTPAIFVHATEAMHGDMGMITSEDLVILISNSGETKETLAPLPSLKRIGAATV 121 Query: 211 AITGFTPNALQQRASHCLYTIAEEQATNSA--SISACHAQGMLTDLLF 256 A TG + L Q L +A + S+ A M+ D L Sbjct: 122 AFTGQDDSHLAQACESVLTIPVTHEADDLGLAPTSSSTAALMVGDALA 169 >UniRef50_C1B3M0 Putative RpiR family transcriptional regulator n=1 Tax=Rhodococcus opacus B4 RepID=C1B3M0_RHOOB Length = 132 Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 3/117 (2%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 IR L QS++++A+ L +P S LA ++ S ++VV+ ++LGY GF L Sbjct: 9 IRAAVPSLTQSERRVAEVCLERPRDVAWGSVADLAAQSRASSATVVRACRRLGYAGFRHL 68 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 + AL E L + S + + + TL+ + Sbjct: 69 RGALLEELGASAREFSPRRQCD---PASAADALRSTFADLSEGLRETLDALDPVAVD 122 >UniRef50_A5VEU9 KpsF/GutQ family protein n=2 Tax=Sphingomonas wittichii RW1 RepID=A5VEU9_SPHWW Length = 334 Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 66/168 (39%), Gaps = 4/168 (2%) Query: 100 EKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIG 158 +++ A+ + E+ V ++ + + R++++G+G SG +A+ A G Sbjct: 24 REVLGVEAQALTLQRDALDED-FARAVELILATQGRVVVSGMGKSGHIARKMAATFASTG 82 Query: 159 FNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPN 218 A V A + DLL+ +S +G EL +G ++AI+ + Sbjct: 83 TPAIFVHPGEAAHGDLGMLLAGDLLVVLSNSGATPELGPIMTYARDLGCPIVAISAQRHS 142 Query: 219 ALQQRASHCLYTI-AEEQ-ATNSASISACHAQGMLTDLLFIALIQQDL 264 + + AS + E N + ++ L D L +A + Sbjct: 143 PMARLASAAIILPKVRETCPVNISPTTSTTLMLALGDALAVATMSMRG 190 >UniRef50_C1NBK9 KpsF/GutQ family protein n=1 Tax=Escherichia sp. 1_1_43 RepID=C1NBK9_9ESCH Length = 332 Score = 91.2 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 67/169 (39%), Gaps = 4/169 (2%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKI 157 ++ ++ + E + +L R R+I+TG+G G +A + L Sbjct: 16 ARNILASEAQSLLEAIPTI-GESFARAIRLLVDTRGRVIVTGMGKPGYIAHKISATLAST 74 Query: 158 GFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTP 217 G + + A + + D++LA+S +G E+ + R+G ++++ G Sbjct: 75 GTPSFYLHPAEAAHGDLGMVTSSDVILALSNSGETPEILALLPVLKRIGLPIISLCGNEN 134 Query: 218 NALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQDL 264 + L + + L +++ N A ++ L D + + L+ Sbjct: 135 STLAKHSDVFLSAAVKQESCPLNLAPTNSTTLSLSLGDAMAVILMNIRK 183 >UniRef50_A6CXK8 D-arabinose 5-phosphate isomerase n=1 Tax=Vibrio shilonii AK1 RepID=A6CXK8_9VIBR Length = 323 Score = 91.2 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 37/171 (21%), Positives = 68/171 (39%), Gaps = 4/171 (2%) Query: 97 LVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLM 155 ++I A L E+ + V+ + + + +II++GIG SG + + A L Sbjct: 10 EYATQVINAEIAEAQKLLGRL-EDNFAQAVSHIVNCQSKIIVSGIGKSGHIGKKMAATLA 68 Query: 156 KIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGF 215 G A V AL + + DL++ IS +G E + G ++ +TG Sbjct: 69 STGSPAFFVHPAEALHGDLGMITKGDLVILISNSGESAEFKTMLPILKERGISIIGMTGN 128 Query: 216 TPNALQQRASHC--LYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDL 264 T + L Q + + +E A S+ ++ D L I ++ Sbjct: 129 TSSHLAQNSDCVVNIAIDSEACPLGLAPTSSAVNTLIMGDALAITAMKIRK 179 >UniRef50_Q9Z826 Uncharacterized protein CPn_0526/CP_0226/CPj0526/CpB0547 n=13 Tax=Chlamydiaceae RepID=Y526_CHLPN Length = 329 Score = 91.2 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 62/173 (35%), Gaps = 3/173 (1%) Query: 95 LRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR-SARRIILTGIGASGLVAQNFAWK 153 V + ++ + A+ ++ + + + + +G+G SG VA+ Sbjct: 7 STDVCQDILGKQKEAVDFFFQAFQPKEAMQLAEKILGHSGWVFFSGVGKSGCVARKLVAT 66 Query: 154 LMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 L + A + L + SP D++ S +G +EL + ++AIT Sbjct: 67 LQSLSERALFFSPVDLLHGDLGLVSPGDIVCLFSKSGETQELLDTVPHLKSRRAILVAIT 126 Query: 214 GFTPNALQQRASHC--LYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDL 264 + L + L ++AE N ++ Q + D L + L Sbjct: 127 SMPYSNLAALSDLVVILPSVAELDPFNLIPTNSTTCQMIFGDFLAMLLFHSRG 179 >UniRef50_C6QLS8 6-phospho 3-hexuloisomerase n=2 Tax=Geobacillus RepID=C6QLS8_9BACI Length = 187 Score = 91.2 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 60/127 (47%), Gaps = 5/127 (3%) Query: 101 KLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFN 160 + + E + T + ++E+ + V + A++I + G G SG ++++FA ++M +G + Sbjct: 7 QYLGEILQELNRTADFIADEEAEKLVNGILQAKKIFVAGAGRSGFMSKSFAMRMMHMGLD 66 Query: 161 AAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNAL 220 A V + DD+L+ S +G R L A++ +G + +T F + + Sbjct: 67 AYVVGET-----ITPNLEQDDILIIGSGSGETRSLVSMAEKAKSLGATIALVTIFPASTI 121 Query: 221 QQRASHC 227 + A Sbjct: 122 GKLADIT 128 >UniRef50_C6I0S8 Sugar isomerase, KpsF/GutQ family protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I0S8_9BACT Length = 333 Score = 91.2 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 68/169 (40%), Gaps = 2/169 (1%) Query: 97 LVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMK 156 ++++E + A+ L +L + ++ +TGIG SG +A+ + Sbjct: 14 ETARRVLEEESQAIRDLLPRIDSSFAEAVGAILDNPGKLAVTGIGKSGHIARKVSATFSS 73 Query: 157 IGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT 216 G A + AL + D+LLA S +G E+ + R+ V+AI G Sbjct: 74 TGTPAFFLHPGEALHGDLGMLESRDILLAFSKSGETEEILALLPLLGRMEVPVIAIVGNK 133 Query: 217 PNALQQRASHCLY--TIAEEQATNSASISACHAQGMLTDLLFIALIQQD 263 + + ++A+ L E A S+ A + D L + ++ + Sbjct: 134 ASTIAKKATWALSAEVSHESGPLGIAPTSSTTAMLAMGDALAMTVLSER 182 >UniRef50_Q10ZT6 KpsF/GutQ family protein n=1 Tax=Trichodesmium erythraeum IMS101 RepID=Q10ZT6_TRIEI Length = 324 Score = 91.2 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 36/174 (20%), Positives = 68/174 (39%), Gaps = 4/174 (2%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAW 152 ++ + +I++ +A+ + + V LR + +++++GIG SG ++Q A Sbjct: 6 SIKQQLKSVIEQEISAISKLCESID-DSWLKAVLRLRDCKGKLVVSGIGKSGSISQKIAA 64 Query: 153 KLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAI 212 G A + A + D+LL +S +G EL R+ ++ I Sbjct: 65 SFTSTGIPAIFIHPTEASHGDLGLLDSSDILLVLSASGQTSELLDIMQYASRLKSSIILI 124 Query: 213 TGFTPNALQQRASHCLYTIA-EEQATNS-ASISACHAQGMLTDLLFIALIQQDL 264 T ++L A L E N A + Q +L D L + L+ Sbjct: 125 TKNPNSSLAHFADIILQIPDLPEACINGLAPTISTTCQLVLGDALVVTLMSLRG 178 >UniRef50_A7VQ52 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQ52_9CLOT Length = 227 Score = 90.8 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 60/152 (39%), Gaps = 7/152 (4%) Query: 82 SVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIG 141 S PI +I ++ + + + M + ++ L + + +A++++ G G Sbjct: 28 SKPIWTEIFKEELKMGLLNEYANTALSEMQQVFDRMDDKDLQPALDAIINAKKVVCYGAG 87 Query: 142 ASGLVAQNFAWKLMKIGFNAA-AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAAD 200 GL + F +LM +G +A A D + D++ G + A+ Sbjct: 88 REGLGLKFFVMRLMHLGKDAHWAWDDT------APSVGEGDVVFISCGPGFYSHVVFIAE 141 Query: 201 EMLRVGGKVLAITGFTPNALQQRASHCLYTIA 232 + G K++ +T + + + A ++ A Sbjct: 142 LCKKAGAKIVLVTAVPDSDMGKVADVIVHLPA 173 >UniRef50_C5A3S6 Glucosamine--fructose-6-phosphate aminotransferase, sugar isomerase (SIS) domain (GlmS) n=1 Tax=Thermococcus gammatolerans EJ3 RepID=C5A3S6_THEGJ Length = 338 Score = 90.4 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 27/183 (14%), Positives = 69/183 (37%), Gaps = 16/183 (8%) Query: 107 TAAMYATLNVNSEEKLHECVTMLRS-------ARRIILTGIGASGLVAQNFAWKLMKIGF 159 ++ T + L + +L+ RR+I G G+S + L+K Sbjct: 8 IRSIRET-----PQALDSALKILKEWDPPEKGFRRVIFIGCGSSYFSSLAGNHVLLKSSI 62 Query: 160 NAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNA 219 + A +L + + L++A S +G E+ A G ++ +T + Sbjct: 63 ESHAFPASEFMLHY-RELAKGALVVASSRSGKTGEVIEAVKVAREKGATIIGVTCNENSK 121 Query: 220 LQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +++ + + E+ N + + A ++ + + L+ + E + + V+ Sbjct: 122 IEEVSDETIAIPNGEEP-NIPATKSFSAITLVLQGIALKLLGR--EEGLNELMAIQQAVE 178 Query: 280 KLV 282 +++ Sbjct: 179 RVL 181 >UniRef50_A8RAB2 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RAB2_9FIRM Length = 250 Score = 90.4 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 42/193 (21%), Positives = 74/193 (38%), Gaps = 31/193 (16%) Query: 33 RHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGD 92 + +++A + VS +S+V+ A+KLGY G+ + +L L S E S I Sbjct: 44 AKIPIREVAKSSYVSTTSIVRLAKKLGYSGYNEMLYSLKGDLVSSIEYRSSDAIRSI--- 100 Query: 93 DPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS--ARRIILTGIGASGLVAQNF 150 T++ S + + + S R + GIG SG VA+ F Sbjct: 101 --------------------TMSEASLNTIDTLIQEILSLEYERFHVIGIGYSGYVAEYF 140 Query: 151 AWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVL 210 KL+++ + A + L+L IS +G ++L + +G V Sbjct: 141 CDKLLELDYFATTKSPLDFEHY------KKSLILFISESGETQDLIFIEERCQALGYSVY 194 Query: 211 AITGFTPNALQQR 223 ++ L Q Sbjct: 195 VLSANMKGTLCQH 207 >UniRef50_D0LJS5 KpsF/GutQ family protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LJS5_HALO1 Length = 334 Score = 90.4 bits (224), Expect = 7e-17, Method: Composition-based stats. Identities = 36/190 (18%), Positives = 72/190 (37%), Gaps = 4/190 (2%) Query: 78 PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RII 136 S V + D ++ +E AA+ + +LR+ ++ Sbjct: 7 DTSSVVHASPNLESRDARVEQAREVFREQAAAIADLGQRID-ASFTRAIELLRTTPGHVV 65 Query: 137 LTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELN 196 + G+G SGL+ Q A L G + V A + + + ++ +SY+G E+ Sbjct: 66 ICGMGKSGLIGQKIAATLASTGTPSFFVHPAEAYHGDLGMITAQNTVMLLSYSGETEEVV 125 Query: 197 LAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDL 254 + R+ ++ + G + L ++ L E + N A S+ A + D Sbjct: 126 RLLPHLQRMRVPLIGLVGRLDSTLARQVDVALDVSVEREACPNNLAPTSSTLAALAMGDA 185 Query: 255 LFIALIQQDL 264 L ++LI + Sbjct: 186 LAVSLIHERK 195 >UniRef50_Q30U66 Sugar isomerase (SIS) n=2 Tax=Helicobacteraceae RepID=Q30U66_SULDN Length = 184 Score = 90.4 bits (224), Expect = 7e-17, Method: Composition-based stats. Identities = 33/188 (17%), Positives = 73/188 (38%), Gaps = 29/188 (15%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQ----NFAWK 153 E K+ + + TL + + + + V L +A+ +I + G G S A + Sbjct: 1 METFTKQYISKLVDTLKKSDLKSISKIVDALDNAKGKIYIIGNGGSAATASHMVNDLGAG 60 Query: 154 LMKIGF---NAAAVRDM--------------HALLATVQ-ASSPDDLLLAISYTGVRREL 195 L + G + ++ D + ++ P+D+L+AIS +G + + Sbjct: 61 LRRRGIKSFDVESLSDNTPVCSALANDIGYKNIFYMQLKDRLKPEDILIAISCSGNSKNI 120 Query: 196 NLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS-ASISACHAQGMLTDL 254 A ++G K++ ITGF L++R+ + + + +L + Sbjct: 121 TKAVKYAKKIGSKIIGITGFDGGKLKKRSDINFHVETDAGEYGIVEDM-----HMVLNHI 175 Query: 255 LFIALIQQ 262 ++ I + Sbjct: 176 IYSYYISK 183 >UniRef50_C8SIC4 Sugar isomerase (SIS) n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SIC4_9RHIZ Length = 208 Score = 90.4 bits (224), Expect = 7e-17, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 65/184 (35%), Gaps = 10/184 (5%) Query: 86 HNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGL 145 + + E L + A + L E ++ ML A R+++ G G L Sbjct: 12 QDDFESGFAVSDRNETLFRTALAELGGVLERVDESRIDTACKMLADAGRVVVYGCGREAL 71 Query: 146 VAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRV 205 + FA +L +G + V D P D+ LA S G + Sbjct: 72 QVKGFAMRLYHLGLPVSVVGD-----MNTPPLGPGDVFLASSGPGETTTVLTLMQVAHAA 126 Query: 206 GGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS-ISACHAQGMLTD----LLFIALI 260 G L +T ++ +RA L A+ A + + ++ G + + LLF ++ Sbjct: 127 GATNLLLTAQAESSAAKRADFTLLIPAQTMANDQGAQKTSVLPMGSVFEGALFLLFEVMV 186 Query: 261 QQDL 264 + Sbjct: 187 LKLK 190 >UniRef50_C2KEC0 SIS domain protein n=2 Tax=Lactobacillus RepID=C2KEC0_9LACO Length = 198 Score = 90.1 bits (223), Expect = 7e-17, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 68/162 (41%), Gaps = 3/162 (1%) Query: 102 LIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFN 160 L ++ + N S + + V +++ + I+LTG G S + A+ L IG Sbjct: 9 LFRQEGQEIIKLANTISNNDVLKLVEKIKNCKGNILLTGCGTSAMDAKKATHTLNVIGVR 68 Query: 161 AAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNAL 220 + + A+ ++ DL++ IS G +EL + + + ++ IT + L Sbjct: 69 SFYLNPSDAVHGSLGVVDSQDLVIFISKGGSTKELTSFIENIKKKNAYIITITESPQSVL 128 Query: 221 QQRASHCLYTIAEE--QATNSASISACHAQGMLTDLLFIALI 260 + A+ + ++ N + ++ A L D++ L+ Sbjct: 129 AKAANMIVKVKVDQEIDEFNMLATTSSLAVISLFDVVACILM 170 >UniRef50_D1C5T9 Glutamine--fructose-6-phosphate transaminase (Isomerizing) n=2 Tax=Bacteria RepID=D1C5T9_SPHTD Length = 350 Score = 90.1 bits (223), Expect = 7e-17, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 56/153 (36%), Gaps = 12/153 (7%) Query: 120 EKLHECVTMLRSA--RRIILTGIGASGLVAQNFAWKL-MKIGFNAAAVRDM----HALLA 172 E+ +R A I++ G+SG A + L M+ GF + Sbjct: 27 EQAEAIAEAIRDAEPNLIVIVARGSSGNAAVYAKYLLGMRNGFPVTLAAPSMFTLYQQPP 86 Query: 173 TVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA 232 + + +++ IS +G ++ + + G +AIT + L A +CL A Sbjct: 87 RLGRA----VVIGISQSGQSADIVAVEEAARQQGALTVAITNHPESPLATAADYCLPLHA 142 Query: 233 EEQATNSASISACHAQGMLTDLLFIALIQQDLE 265 A+ Q M LL AL +D + Sbjct: 143 -GPEYAVAATKTYTNQLMALALLSTALRGEDAD 174 >UniRef50_Q58815 Mja gf6p intein n=17 Tax=cellular organisms RepID=GLMS_METJA Length = 1099 Score = 90.1 bits (223), Expect = 7e-17, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 57/169 (33%), Gaps = 6/169 (3%) Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA 176 S E++ E ++ R+ +G S A + K+G A D L Sbjct: 778 ISAEEIKELAKCIKDYDRVYFVAMGTSLHAAMVVEYLFAKLGKLVIAC-DASEFLNK-GV 835 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 L++ I+ +G + A + K AI + + A + A Sbjct: 836 VDDKTLVIGITQSGETYDTLKALRFAKKNKAKTGAIVNVLGSTATREADITVMMGA-GIE 894 Query: 237 TNSASISACHAQGMLTDLLFIALIQ---QDLELAPERIRHSEALVKKLV 282 + +Q M+ LFI + +D+ + I +K+++ Sbjct: 895 IAVCATKTYTSQLMILYRLFIEYGKLLGRDMSEYEKEIDKIPNYIKEVL 943 >UniRef50_Q8EMY6 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8EMY6_OCEIH Length = 185 Score = 90.1 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 73/186 (39%), Gaps = 14/186 (7%) Query: 103 IKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAA 162 + + L +E +L E ++ A R+ + G G SGLV + F +LM G+ Sbjct: 5 VNTIAKEIQEVLGQVNEAELIELAEGIQQASRVFIAGTGRSGLVGKMFGMRLMHSGYQIY 64 Query: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222 V + + + +DLL+ IS +G L A + + KV +T +A+ Sbjct: 65 IVGETNTP-----SLESNDLLILISGSGGTSSLLNYAKKAKEIDAKVALVTTNKESAIGS 119 Query: 223 RASHCLYTIA------EEQATNSASISACH--AQGMLTDLLFIALIQQDL-ELAPERIRH 273 ++++ + A ++ + + + +L D + + L+ E + Sbjct: 120 QSTYIVRVPAATKKRLPQEPETIQPLGSQFDQSAHLLLDAIVVYLLDTYPANRTVESLNQ 179 Query: 274 SEALVK 279 ++ Sbjct: 180 KHTNLE 185 >UniRef50_D0RRD5 Arabinose 5-phosphate isomerase n=2 Tax=alpha proteobacterium HIMB114 RepID=D0RRD5_9RICK Length = 324 Score = 90.1 bits (223), Expect = 9e-17, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 65/175 (37%), Gaps = 6/175 (3%) Query: 95 LRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWK 153 + G+KLIKE A+ + + V ++ + + I+ +G+G S L+ + Sbjct: 7 ILSFGKKLIKEEINALIKLHKNLNIN-FSKAVNLINNTKGNIVFSGVGKSKLILEKTCGT 65 Query: 154 LMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 +G + + A ++ +D L+ S +G EL + K++ I+ Sbjct: 66 FSSLGVPSYVLDASQATHGSLGNLKNNDTLIIASNSGNTNELIAIFKFAKKYRIKIIGIS 125 Query: 214 GFTPNALQQRASHCLYTI----AEEQATNSASISACHAQGMLTDLLFIALIQQDL 264 + + L + + + + S+ + D L I++ + Sbjct: 126 SNSKSQLFKNSDINIVYPKVKEIGDSNFKLVPTSSTTTLSAIGDALAISVAKLRG 180 >UniRef50_C1I9S8 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I9S8_9CLOT Length = 252 Score = 89.3 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 36/253 (14%), Positives = 83/253 (32%), Gaps = 40/253 (15%) Query: 1 MNGLLRIRQRY------------QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQ 48 MN L + R+ D+K+ + ++ + + + +A SQ Sbjct: 1 MNILSQEREIMTKIYHLNRLFPNSNFRDGDEKIIENIIEAIKSKSVIDIRSIAQINYTSQ 60 Query: 49 SSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTA 108 SS+ + +++ G+ F LS + + + + + D + + + Sbjct: 61 SSISRLSKRAGFNNFKEFIFFLSNEFSHKSINQLEALPFVMVNQDW--DLIDSYFNNAFS 118 Query: 109 AMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH 168 ++I L G G + KL+ A+ Sbjct: 119 N-----------------------KKIYLFGEGFCQTLVNYTYRKLLL--KKIYAIDLEG 153 Query: 169 ALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL 228 + V +P L + S +G + L +E + GGKV+A+T ++ ++ Sbjct: 154 VEIGLVSDQTPYTL-ITFSQSGENKNGLLKMEECKKYGGKVIALTATENSSYTVKSDLSF 212 Query: 229 YTIAEEQATNSAS 241 + + + + Sbjct: 213 IVESGSTSIDHEN 225 >UniRef50_Q11YC7 Sugar phosphate isomerase, KpsF/GutQ family n=27 Tax=cellular organisms RepID=Q11YC7_CYTH3 Length = 322 Score = 89.3 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 72/171 (42%), Gaps = 4/171 (2%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAW 152 + + +I + A+ +N + + + + S + R+++TGIG S ++ Sbjct: 6 NIVSIVTDVILNESEAIKNLVNHIN-DDFQHIIDAILSCKGRVVITGIGKSAIIGNKIVA 64 Query: 153 KLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAI 212 L G A + A+ + D+++ IS +G E+ + + G ++ + Sbjct: 65 TLNSTGTPALFMHAADAIHGDLGMIQGGDVVICISKSGNTPEIKVLVPLIKNRGTILIGM 124 Query: 213 TGFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQ 261 G + L ++ + L E + N A ++ A ++ D L +AL++ Sbjct: 125 VGNVDSYLAVQSDYVLNVTVEREACPNNLAPTTSTTATLVMGDALAVALLE 175 >UniRef50_Q5HRH6 SIS domain protein n=6 Tax=Staphylococcus epidermidis RepID=Q5HRH6_STAEQ Length = 182 Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 36/163 (22%), Positives = 64/163 (39%), Gaps = 10/163 (6%) Query: 103 IKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAA 162 + + ATL+ + + A RI G G SG V+ +FA +L ++G NA Sbjct: 7 YRLILEELDATLSQVDNTEYERFANDVIGADRIFTAGKGRSGFVSNSFAMRLNQLGKNAY 66 Query: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222 V + + DL + IS +G L L A++ VG K++ +T + + Sbjct: 67 VVGESTTP-----SIKEHDLFIIISGSGSTEHLRLLAEKAQSVGAKIVLLTTNADSPIGN 121 Query: 223 RASHC--LYTIAEEQATNSA-SISACH--AQGMLTDLLFIALI 260 A L + S + + A + D + + L+ Sbjct: 122 LAETVVELPAGTKHDVEGSKQPLGSLFEQASLIFLDSIVLPLM 164 >UniRef50_Q467C4 Hexulose-6-phosphate isomerase n=4 Tax=Methanosarcinaceae RepID=Q467C4_METBF Length = 204 Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 56/128 (43%), Gaps = 5/128 (3%) Query: 109 AMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH 168 + ++ E + + + RI L G G SGLVA+ FA +LM +GF+ V + Sbjct: 22 NLSEIIDKLDREAIKLMIQKILEGERIFLMGAGRSGLVAKAFAMRLMHLGFSVYVVGETT 81 Query: 169 ALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL 228 P+D+++AIS +G + + +G ++ +T + L + + + Sbjct: 82 TPA-----VRPEDIVIAISGSGETHSIADLGKIVKDIGSTLITVTSKKESTLGRISDVTM 136 Query: 229 YTIAEEQA 236 ++ + Sbjct: 137 ILPSKTKN 144 >UniRef50_B5JQT0 Sugar isomerase, KpsF/GutQ family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQT0_9BACT Length = 326 Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 70/170 (41%), Gaps = 7/170 (4%) Query: 100 EKLIKENTAAMYATLNVNSEEKLHECVTMLRSA----RRIILTGIGASGLVAQNFAWKLM 155 ++ + AA++AT + + + V++L ++IL+G+G + + Q L Sbjct: 11 QRCLDIEIAALHATRDSLD-ARFAQVVSLLHQTLARGNKLILSGVGKNAHICQKLVGTLN 69 Query: 156 KIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGF 215 G + + + AL + D ++A S +G EL + R + +A+T Sbjct: 70 STGAPSTFLDPVQALHGDLGLCRQRDTVVAFSNSGETAELLRFLPMVQRFDVQTIAVTAK 129 Query: 216 TPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQD 263 ++L + L E + A ++ A + D + + L++ + Sbjct: 130 PDSSLAKMCDATLLYAIEREACPLELAPTASTTASLAIGDAVAMVLLELN 179 >UniRef50_A5EVJ8 Arabinose 5-phosphate isomerase n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EVJ8_DICNV Length = 320 Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 36/147 (24%), Positives = 59/147 (40%), Gaps = 3/147 (2%) Query: 120 EKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 + L R +I++G+G SG +A A G A V A + + Sbjct: 28 DDFGRACETLMKTRGHVIVSGMGKSGHIAAKLAATFASTGTPAFFVHPSEAGHGDLGMIT 87 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ--A 236 D LL +S++G EL + + V+A+TG + L Q A + E + Sbjct: 88 AADTLLMLSFSGESGELLAMLPALKTLAVPVIAMTGNPQSHLAQNADIHIPIHIEREACP 147 Query: 237 TNSASISACHAQGMLTDLLFIALIQQD 263 N A ++ A + D L I+L+Q Sbjct: 148 LNLAPTASTTAMLAVGDALAISLMQAR 174 >UniRef50_Q0FF93 KpsF/GutQ family protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FF93_9RHOB Length = 329 Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 37/175 (21%), Positives = 72/175 (41%), Gaps = 6/175 (3%) Query: 96 RLVGEKLIKENTAAMYATLNVNSEE---KLHECVTMLRS-ARRIILTGIGASGLVAQNFA 151 + L+ A + T ++ E+ ++ V ++ + + R++++G+G SG++ + Sbjct: 5 STFKDCLLTGTNAMVTLTDSLKDEKFVKQVEAAVNVICTTSGRLVISGMGKSGIIGKKLV 64 Query: 152 WKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLA 211 G + + A + DD+LL +S++G REL R ++A Sbjct: 65 ATFASTGTPSLFLHPAEASHGDLGMLCKDDVLLLMSFSGESRELIDIIRYSKRFDVPIIA 124 Query: 212 ITGFTPNALQQRASHCLYTI--AEEQATNSASISACHAQGMLTDLLFIALIQQDL 264 T + L + A L E N A S+ Q L D L I L+++ Sbjct: 125 FTANANSTLGKAADILLQLPKVKESCPHNLAPTSSTLIQLALGDALAITLLKEKG 179 >UniRef50_B7UNE8 Predicted phosphosugar isomerase n=12 Tax=cellular organisms RepID=B7UNE8_ECO27 Length = 189 Score = 88.5 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 28/183 (15%), Positives = 64/183 (34%), Gaps = 13/183 (7%) Query: 103 IKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAA 162 I E + + E+ + + ++ ++R+ G+G +G + F +LM +G Sbjct: 11 ITEIINELTFVKDSIREDDCTKLIDAIQQSQRVFCYGLGRAGFSMKAFTMRLMHMGKEVY 70 Query: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222 + + P DL + S +G +L A + ++GG V +T + + Sbjct: 71 FLTET-----ITPNFGPGDLFIVSSASGETAQLVALAKKARQLGGAVAVLTTNRHATITE 125 Query: 223 RASHCLYTIAEEQATNSASISA--------CHAQGMLTDLLFIALIQQDLELAPERIRHS 274 + A + + + A ++ D L + + + E + Sbjct: 126 FVDVIVQINAPSKNQKDSVFRSAQPMASLYEQALLVIADALVMKMAAESGAPESELFKRH 185 Query: 275 EAL 277 L Sbjct: 186 ANL 188 >UniRef50_A4THA2 Phosphosugar isomerase/binding protein n=30 Tax=Enterobacteriaceae RepID=A4THA2_YERPP Length = 201 Score = 88.5 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 65/162 (40%), Gaps = 3/162 (1%) Query: 106 NTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAAV 164 + + A ++ + + L R +I +TG+G SG+ A+ A L + A + Sbjct: 17 YSRELAALKENVDQQVWLQVLDALAECRGKIAVTGVGTSGIAARKVAHMLACVEQPAIYL 76 Query: 165 RDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRA 224 A + D+++ IS G EL + R K++++T +A+ Q + Sbjct: 77 NATDAAHGDLGFLGAQDIIILISRGGNSDELTRLLPTLQRKQVKIISVTENEQSAIAQVS 136 Query: 225 SHCLYTIAEE--QATNSASISACHAQGMLTDLLFIALIQQDL 264 + L T ++ N + ++ L D + L+ + Sbjct: 137 ALVLKTHVKQEIDPLNMLATTSIVLVLALFDAICACLMARTG 178 >UniRef50_B0NET0 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B0NET0_EUBSP Length = 189 Score = 88.5 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 69/191 (36%), Gaps = 17/191 (8%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECV---TMLRSARRIILTGIGASGLVAQNFAWKLM 155 K + + V ++ L E +R A RI + G+G G+ ++FA +LM Sbjct: 3 CRKYEELYCTVLNEHREVFEKQDLDEVTLFMEQIRKAERIFVMGVGREGIAGRSFAMRLM 62 Query: 156 KIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGF 215 +G + D T DL +AI+ +G ++ + G + +TG Sbjct: 63 HLGKEVHWIWD-----DTTPGMHEGDLFIAINGSGKIGHIHYVVKQAKETGAAITVVTGG 117 Query: 216 TPNALQQRASHCLYTIAEE-QATNSASISACHAQ--------GMLTDLLFIALIQQDLEL 266 + A L+ A T+S ++ + +L D++ + L ++ Sbjct: 118 PKEKTARLADCVLFVPASVFNGTDSRAVPSVQPMGNLFEQHLFLLFDIIIMLLEEEMKVT 177 Query: 267 APERIRHSEAL 277 + + Sbjct: 178 HEQMEARHRNI 188 >UniRef50_D1PQW6 Transcriptional regulator, RpiR family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQW6_9FIRM Length = 261 Score = 88.5 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 68/176 (38%), Gaps = 16/176 (9%) Query: 18 DKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQ 77 D+++A Y++ A ++ +++ V +S+ +F +K+G + F L+ L ++ Q Sbjct: 23 DQRIAQYIMDHLGDAEAITMKRMEQTCHVGNASLSRFCRKIGLRDFFELR-ELVGSVQFQ 81 Query: 78 PESPSVPIHNQIRGDDPLRLVGEKLI---KENTAAMYATLNVNSEEKLHECVTMLRSARR 134 D ++ ++ SE ++ + R Sbjct: 82 A------------SGDDAHTFAGRMTAHRDSILRSLDMVTASLSETAVYALCADIHHYAR 129 Query: 135 IILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 + + GI S A ++ +G N V ++ + P+DL+L +SY G Sbjct: 130 VAVFGILKSEAAALVMQSEMAALGKNVFTVVSHVQQREWLRTAGPEDLILLLSYRG 185 >UniRef50_D1Y338 Arabinose 5-phosphate isomerase n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y338_9BACT Length = 340 Score = 88.5 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 3/147 (2%) Query: 121 KLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 +L +L + + RI+++GIG +G + + A L +G + ++ A + Sbjct: 47 ELVRAARLLEACKGRIVVSGIGKAGHIGRKIAATLSSLGTPSFFLQASEAAHGDLGMVRH 106 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA--EEQAT 237 +D+ L IS +G E+ R+G V+A++G + L A L + E Sbjct: 107 EDVALLISNSGKTAEVVALLPFFRRIGAPVIAVSGDAASPLALGADIFLNSAIEREADPL 166 Query: 238 NSASISACHAQGMLTDLLFIALIQQDL 264 N A S+ Q + D L + Sbjct: 167 NLAPTSSTTLQLAIGDALGAMVTLLRG 193 >UniRef50_A8MC94 Glutamine amidotransferase class-II n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MC94_CALMQ Length = 595 Score = 88.1 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 81/211 (38%), Gaps = 4/211 (1%) Query: 71 SEALASQPESPSVPIHNQIRG-DDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTML 129 + +++ SP + + + K I E + +NV E L + +++ Sbjct: 225 ASSMSKVEPSPQLASQTTVEVVKGSFQHYMIKEIYEEPEVLARAVNVLQREYLDDAASIV 284 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIG-FNAAAVRDMHALLATVQASSPDDLLLAISY 188 A+ II TG G S + + L ++G A A+ V+ P L++AIS Sbjct: 285 AKAKNIIFTGSGTSYYASLIGKYYLEELGGVKADAIPAGEFPYLGVRYVEPGTLIIAISQ 344 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 +G ++ R G VL+I +AL + ++ L A + + A Sbjct: 345 SGESTDIIRTIRWAKRKGAIVLSIVNRLGSALMRESNVYLPMGA-GPELAVPATKSFVAS 403 Query: 249 GMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + L A+ + ++ A I + ++ Sbjct: 404 IAIMLQLAYAV-KGNVNDARSLINKAIIMLN 433 >UniRef50_B1Y4W5 Transcriptional regulator, RpiR family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y4W5_LEPCP Length = 311 Score = 88.1 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 39/229 (17%), Positives = 77/229 (33%), Gaps = 10/229 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RI L+ +K+A++L+ + A + +VV+ A++ G++G Sbjct: 57 LLQRIEADLPKLSPQLRKVAEHLVRERGLPHRYRITDFARLTDTTPVTVVRLAKRYGFQG 116 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK A L +P + ++ ++ A+ A +V Sbjct: 117 FYELKFAF---LLDDDGAPPAAMTDEPEPSPSDPQA----LRGAQRAIAALRSVVEHPAF 169 Query: 123 HECVTMLRSARRIIL-TGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + L A + + + A +A L G A + L A ++ Sbjct: 170 MQTARWLLEADGVWVGSASRADEALAGCMVQSLQFAGLPARSAS-TDRLEAQASSTFSRS 228 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPN-ALQQRASHCLY 229 + L ++ TG + R +V+A+ + A L Sbjct: 229 VHLHVALTGESPGTSGTVHSAARWQDRVIALCRAPQSAPPAITADERLV 277 >UniRef50_A7B0I1 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0I1_RUMGN Length = 273 Score = 87.7 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 33/240 (13%), Positives = 79/240 (32%), Gaps = 20/240 (8%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + + ++ ++ +A ++ +S +A VS+S++ KF + +G++ Sbjct: 8 LITALNEKKPD--STEFYIAKMMIWNLWELPRMSISDVAKMCAVSKSTISKFVRDIGFED 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + KL + + + + EK++ E+ ++ L E++L Sbjct: 66 YLDFKLEAVRQGKKEIYNSNGKCNITDYIRGHGIWEYEKILSEDIRSV---LFGIEEDQL 122 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 L + + GI S A N K+ + ++++ + L Sbjct: 123 KRLAVDLHEYKHLAAFGISYSESAAINLQHKMHYYHKFLYTTMNDRQQENYIESADEETL 182 Query: 183 LLAISYTGV------RRELNLAADEMLRVGGKVLAITGFT---------PNALQQRASHC 227 + S +G RE + K++ +T L + A Sbjct: 183 IFIFSNSGKYITEYQNREGRPPKYSFDKTKAKIVLVTSNEQMLVDKRVDECVLFRYADCV 242 >UniRef50_Q9WXZ5 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=13 Tax=Thermotogaceae RepID=GLMS_THEMA Length = 606 Score = 87.7 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 57/157 (36%), Gaps = 9/157 (5%) Query: 130 RSARRIILTGIGASGLVAQNFAWKL-MKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 ++A RI + G S F + L + + D+L+AIS Sbjct: 289 KNADRIRVVSCGTSYYAGLVFKYFLENHTDIDVE-IEVSSEFRYKRPHIKEGDVLIAISQ 347 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 +G + + + G K+++I + L + + L+ A A+ A+ Sbjct: 348 SGETADTLESVRLAKKHGAKIVSIVNVVGSTLDRESDVTLFMNA-GPEIGVAATKTYVAE 406 Query: 249 GMLTDLLFIALIQQDL------ELAPERIRHSEALVK 279 + LL + +++ + E +++ L++ Sbjct: 407 LAVLYLLGLKIMEINGYWDREAEEILDKLVRMPELLE 443 >UniRef50_C3RNG5 Predicted protein n=3 Tax=Bacteria RepID=C3RNG5_9MOLU Length = 250 Score = 87.7 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 41/275 (14%), Positives = 97/275 (35%), Gaps = 37/275 (13%) Query: 1 MNGL-LRIRQRYQG--LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQK 57 MN L RI G L S + +++ LS +++ ++ +S+ +++F Sbjct: 1 MNLLISRILTYLNGTLLYDSHYRFCKFIVYHYLELEDLSFNEVSEKSQISKEDILRFCAL 60 Query: 58 LGYKGFPALKLALSEAL---ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATL 114 LG+ + K L + Q + + ++++ D+ + +++ E + + Sbjct: 61 LGFDDYDTFKAELLRSHMIRLDQIRARMLGVNSEQLIDEMEKSCSNEVMSEYISTI---- 116 Query: 115 NVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATV 174 + A+R++L G +A F L+ G + + Sbjct: 117 -----------CEAIFKAKRVVLIGALYPMSIAVEFQTDLVSFGKPVIQYHNFDKDI--- 162 Query: 175 QASSPDDLLLAISYTGVRRELNLAADEMLRVGG---KVLAITGFTPNALQQR--ASHCLY 229 +D+ + +S TG +N + + + IT AL + + + + Sbjct: 163 -QLDENDVTIFVSATGRS--MNSFVEIKKELRVDLTTSILITQNKTYALDEYKISDYVIQ 219 Query: 230 TIAEEQATNSASISACHAQGMLTDLLFIALIQQDL 264 + + + + + DLL + QQ Sbjct: 220 VPGK---FDGINFNYQI--MTICDLLRVHYYQQYY 249 >UniRef50_A3VSH4 Arabinose 5-phosphate isomerase n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VSH4_9PROT Length = 327 Score = 87.4 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 37/175 (21%), Positives = 63/175 (36%), Gaps = 5/175 (2%) Query: 87 NQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTML-RSARRIILTGIGASGL 145 + D + G ++ A++ + V L ++ ++TG+G SG Sbjct: 3 TNVSASDTIAT-GRAVLTTEANALHTLGEQLD-DAFAAAVRHLTATSGFTVVTGVGKSGH 60 Query: 146 VAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRV 205 + + A G + V A + P +L+AIS +G REL R Sbjct: 61 IGRKMAATFASTGTPSFFVHPTEASHGDLGMLDPKGVLIAISNSGETRELRDILLYANRR 120 Query: 206 GGKVLAITGFTPNALQQRASHCLYTI-AEEQ-ATNSASISACHAQGMLTDLLFIA 258 ++A+T + L +RA L E A S+ L D L +A Sbjct: 121 HVPLIAMTARPDSFLAKRAEVTLLLPRTPEACPNGLAPTSSTTMTLALGDALAVA 175 >UniRef50_UPI000196BAB9 hypothetical protein CATMIT_00189 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196BAB9 Length = 249 Score = 87.0 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 74/197 (37%), Gaps = 17/197 (8%) Query: 20 KLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPE 79 ++A LL +L+ +LA VS SS+ +F + GYK + K S + + Sbjct: 23 QIALGLLENGHELDYLTINELAERCFVSTSSLNRFFRIYGYKKYMIFKALFSSHMRIRYV 82 Query: 80 SPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTG 139 I +D + K+ + + + E M+ +++R+IL G Sbjct: 83 QIQNRI------NDKDYEMLHKVFSSILKS-EDYERLIDMSWVKEVCEMIYNSKRVILIG 135 Query: 140 IGASGLVAQNFAWK---LMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELN 196 S +A F+ +G V+D DD ++ +S G +LN Sbjct: 136 ---SDEMASYFSRMQIDFYVMGKLV--VKDS-IYKTNFFTPEKDDCVILLSMEGRIVDLN 189 Query: 197 L-AADEMLRVGGKVLAI 212 ++M K++ I Sbjct: 190 PWLLNKMKENNPKMITI 206 >UniRef50_D2PN41 Arabinose-5-phosphate isomerase n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PN41_9ACTO Length = 278 Score = 87.0 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 2/129 (1%) Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRR 193 +++TG+G SGLV + A L G A + AL A + DL+LA+S +G Sbjct: 119 HLVVTGLGKSGLVGRKIAATLASTGTPATFIHAGDALHGDSGAVTSRDLVLALSASGETA 178 Query: 194 ELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGML 251 E+ A + V+A+TG + L Q A++ L T+ E N A ++ A ++ Sbjct: 179 EVCAFARMLAERSIPVIAMTGAEHSTLAQLATYTLDTMVLREADPLNLAPTASTTAALVM 238 Query: 252 TDLLFIALI 260 D L AL+ Sbjct: 239 GDALACALV 247 >UniRef50_C3RI60 Predicted protein n=2 Tax=Bacteria RepID=C3RI60_9MOLU Length = 269 Score = 87.0 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 42/250 (16%), Positives = 90/250 (36%), Gaps = 10/250 (4%) Query: 12 QGLAQS-DKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 + L+ + + +A ++ + +S +Q+A EA +S +SV +F QK+GY F K L Sbjct: 17 ENLSNTNEYNIARIIIEHIGDIKTVSLEQIAQEANISIASVSRFVQKIGYSSFQDFKDGL 76 Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 + + +V Q L + + L E + + T EKL +L Sbjct: 77 DYFIRNLNMVRTVSNMQQFMRT-SLDNLADSLYVEAISNLRQTKLNLDMEKLVAITKLLL 135 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA--ISY 188 ++R + G + L+ A D L+ +S Sbjct: 136 NSRSVTFIGDTHEMIDFYTVQLDLVANEVPAYLFDLQEFQDIHSDFFKDGDTLVLLNVSN 195 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQ--QRASHCLYTIAEEQATNSASISACH 246 ++ + K++ F + L + + +Y ++ N S + Sbjct: 196 DFYSEIQKRVVEKASQKNLKLVV---FAQDDLAEQKIFDY-IYQYGIPKSINDGYYSLFY 251 Query: 247 AQGMLTDLLF 256 ++++L++ Sbjct: 252 LSQIISELIY 261 >UniRef50_C5CFI6 Glutamine--fructose-6-phosphate transaminase (Isomerizing) n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CFI6_KOSOT Length = 339 Score = 87.0 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 25/169 (14%), Positives = 57/169 (33%), Gaps = 9/169 (5%) Query: 119 EEKLHECVTMLRSAR--RIILTGIGASGLVAQNFAWKLMKI---GFNAAAVRDMHALLAT 173 E + + ++ + I G G+S +A + ++ + + Sbjct: 22 PEVIQKLKDLILDKKPKEINFVGCGSSYYLAMGLSRHFNRLSDGEIRSNYYSGSEIMF-G 80 Query: 174 VQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE 233 + D LL+ +S +G E A ++ G + A+T + + + A + Sbjct: 81 LSKLPADSLLIGLSRSGESSETIGALEKARDYGAYIAAVTCEPGSTMTRVADVTVEMDFI 140 Query: 234 EQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 E+ + + + L L L E ++ L KK++ Sbjct: 141 EEK-SIVMTKSFTSMAFLISALAKDLFSS--ENLESYLKEIPELSKKVL 186 >UniRef50_D1AJ20 6-phospho 3-hexuloisomerase n=2 Tax=Bacteria RepID=D1AJ20_SEBTE Length = 186 Score = 87.0 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 64/179 (35%), Gaps = 14/179 (7%) Query: 108 AAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM 167 + S E + + ++ + RI + G G SG A+ FA +LM +G V + Sbjct: 12 RELSEDAEFVSGEDIEKLAELIIKSNRIFIAGAGRSGFAARAFANRLMHLGLTVFFVGET 71 Query: 168 HALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHC 227 +DLL+ S +G L A++ V IT + + + Sbjct: 72 TTPSIQA-----NDLLIIGSGSGETGSLVTMANKASGQNASVATITIYPQATIGALSKVT 126 Query: 228 --LYTIAEEQATNSA-----SISACHAQGMLT--DLLFIALIQQDLELAPERIRHSEAL 277 L + +S + + Q L D L + L+++ + E ++ L Sbjct: 127 VKLPGSTNKSDIDSGKVSIQPMGSSFEQLSLLVYDSLIMILMKKLNKTGDEMFKNHANL 185 >UniRef50_A5VTJ4 Sugar isomerase, KpsF/GutQ n=36 Tax=Rhizobiales RepID=A5VTJ4_BRUO2 Length = 359 Score = 86.6 bits (214), Expect = 8e-16, Method: Composition-based stats. Identities = 46/201 (22%), Positives = 77/201 (38%), Gaps = 5/201 (2%) Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 K L+ + + + LR + K A+ LN E V Sbjct: 19 KKRLTLCAMEKLDITQKLADAEAAITSALRTI--KTENAGLVALEEALNNGLSGPFVEAV 76 Query: 127 TMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 + ++R R+++TG+G SG + A G +A V A + +D++LA Sbjct: 77 ERIVASRGRLVVTGVGKSGHIGSKLAATFASTGTSAFFVHSGEANHGDLGMIGLEDVILA 136 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI--AEEQATNSASIS 243 IS++G EL + R ++AIT +AL + A L E A + Sbjct: 137 ISWSGETVELKGIVNYSQRFRIPLIAITSRQDSALGRAADVVLLLPKATEACPHGLAPTT 196 Query: 244 ACHAQGMLTDLLFIALIQQDL 264 + Q + D L IAL++ Sbjct: 197 STMMQLAIGDALAIALLEARG 217 >UniRef50_UPI000058959B transcriptional regulator n=1 Tax=Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 RepID=UPI000058959B Length = 141 Score = 86.6 bits (214), Expect = 8e-16, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 47/130 (36%) Query: 140 IGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAA 199 +G S +AQ +K IG + + ++ + ++ + + IS TG + A Sbjct: 1 MGISYSLAQQSTFKFQSIGIESNSFDGINEHYISNLKNTDKKIAILISITGQNPTIIEIA 60 Query: 200 DEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIAL 259 + G +AI+ L Q ++ + + + + D+LF L Sbjct: 61 KYLKARGIYTIAISSSINTELGQVCDQIFKFSDDKLILSMEVLPIIISVQYVIDILFSIL 120 Query: 260 IQQDLELAPE 269 + + E Sbjct: 121 LTHKYDQNIE 130 >UniRef50_B4TE86 6-phospho 3-hexuloisomerase n=8 Tax=Enterobacteriaceae RepID=B4TE86_SALHS Length = 188 Score = 86.6 bits (214), Expect = 9e-16, Method: Composition-based stats. Identities = 37/172 (21%), Positives = 62/172 (36%), Gaps = 15/172 (8%) Query: 100 EKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF 159 + + + + ++ L + A+ + + G G S L+ + FA +LM IG Sbjct: 5 QSVAGVACSDLNQAMSRIDGAALARLEQAIADAKAVFVFGAGRSLLMLKAFAMRLMHIGL 64 Query: 160 NAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNA 219 V D A DLLL S +G L A + ++GG V +T F + Sbjct: 65 KVHVVGD-----VVTPALQKGDLLLLASASGETASLVNVATKAKQLGGTVALLTIFPEST 119 Query: 220 LQQRASHCLYTIA--------EEQATNSASISACH--AQGMLTDLLFIALIQ 261 L + A + A E + A +L D + + L Q Sbjct: 120 LGKLAGVAVRIPAYSDKLPDGPENVKGILPGGSLFEEAVMVLGDAMIVNLAQ 171 >UniRef50_B1LR09 Sugar isomerase, KpsF/GutQ family n=21 Tax=Bacteria RepID=B1LR09_ECOSM Length = 198 Score = 86.6 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 72/174 (41%), Gaps = 4/174 (2%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAW 152 L + + ++ A+ ++ ++ + +L+S + +++ G+G SG++A+ A Sbjct: 5 DLIHLIKHFMRNEHKAVEEVIDS-PLSEVANLIKVLQSCQGKVVFIGVGKSGIIARKLAA 63 Query: 153 KLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAI 212 G + V A+ + + DD+++ IS +G E+ + ++G +++ Sbjct: 64 TFASTGTPSFFVHGTEAVHGDLGMVAKDDVVILISNSGETAEILATLPSLKKMGNYLISF 123 Query: 213 TGFTPNALQQRASHC--LYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDL 264 T ++L + +E A + ++ D + +AL + Sbjct: 124 TRSHHSSLAISCDLSVEIPVKSEADNLGLAPSCSSTVVLVVGDAVALALSELKK 177 >UniRef50_A6VUC5 KpsF/GutQ family protein n=12 Tax=Bacteria RepID=A6VUC5_MARMS Length = 342 Score = 86.2 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 38/175 (21%), Positives = 70/175 (40%), Gaps = 4/175 (2%) Query: 90 RGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQ 148 D L + + A+ N E+ + V M+ +++ R I+ G+G SGL+ + Sbjct: 27 THSDILIDSARRTLSTQAQALANLANQV-TEEFPKAVRMILASKGRTIICGMGKSGLIGK 85 Query: 149 NFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGK 208 A L G + + A + P+D+L+ IS++G EL + G Sbjct: 86 KIAATLASTGTPSFFLHPGEAFHGDLGMIQPEDVLVLISFSGETEELMRLLPSLKSFGNP 145 Query: 209 VLAITGFTPNALQQRASHC--LYTIAEEQATNSASISACHAQGMLTDLLFIALIQ 261 +A+ G + L + L E N A ++ + D L +AL++ Sbjct: 146 SIAMVGNIDSTLAKHCDCVLDLSIDKETCPNNLAPTTSTTMTTAMGDALAVALME 200 >UniRef50_C3RJM3 Predicted protein n=2 Tax=Bacteria RepID=C3RJM3_9MOLU Length = 264 Score = 86.2 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 32/204 (15%), Positives = 76/204 (37%), Gaps = 9/204 (4%) Query: 20 KLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPE 79 ++A + D +S ++LA + +SQ+SV +F + GYK + Q Sbjct: 24 QVAKAIFTNRDKINEISLEKLAGDNYLSQASVSRFIKNQGYKNINEYRWDFIA--GQQML 81 Query: 80 SPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTG 139 + + ++ + + + A ++ L V ++ + ++++ G Sbjct: 82 RLNAFNNKKVIISKNNEEIKNDVKQSLQNAFND-IDKLDMTALERLVKIINNYKQVLFIG 140 Query: 140 IGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG------VRR 193 S ++++ G NA + D + +++ D L++ IS +G + Sbjct: 141 SEFSLANIYLVQLEMVQYGINAYSYNDPIIMAENLRSLKEDTLIICISTSGQWYNAPSTK 200 Query: 194 ELNLAADEMLRVGGKVLAITGFTP 217 E+ + + IT T Sbjct: 201 EIRDILFSLNNPKILLTCITQHTD 224 >UniRef50_Q8D2M7 YrbH protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=Q8D2M7_WIGBR Length = 327 Score = 86.2 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 70/177 (39%), Gaps = 4/177 (2%) Query: 86 HNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASG 144 +N + + G++++ + + + + +L +I GIG SG Sbjct: 3 NNDVPSNFDFIYYGKQVLDLEKNGICKLKKCINRD-FQKIGELLLKCNGKIATMGIGKSG 61 Query: 145 LVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLR 204 +A+ + G + + A + + +D+++AIS +G +E+ + Sbjct: 62 HIARKLSSTFSSTGSPSFFIHPTEAGHGDLGSLCSNDIVIAISNSGESKEIISLIYYLNN 121 Query: 205 VGGKVLAITGFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIAL 259 ++ITG + + + + L ++ + + ++ A ++ D L I+L Sbjct: 122 FNITYISITGNPLSTMSKLSKINLSIKVTKEACSLGLSPTTSSTAALVMGDALAISL 178 >UniRef50_C0QVG6 D-arabinose-5-phosphate isomerase n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0QVG6_BRAHW Length = 320 Score = 86.2 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 61/165 (36%), Gaps = 4/165 (2%) Query: 108 AAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD 166 + + V L + R R+I +G+G SG +A+ A G + V Sbjct: 16 ENLKMLSDKLD-SNFENAVKELFNIRGRVITSGVGKSGHIARKAAATFASTGTPSFFVDP 74 Query: 167 MHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASH 226 + + +D L S G RE+ + + R +AIT + L + A Sbjct: 75 NECMHGDFGMITKEDYCLLYSKGGESREIIELVNWLCRQNIPYIAITNDINSTLSKNAKI 134 Query: 227 CLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQDLELAPE 269 L T +E+ A + A L+D L AL++ A + Sbjct: 135 TLLTHVKEEACPLRLAPTVSTTASLALSDALATALMELRGFRAED 179 >UniRef50_C1QDK1 KpsF/GutQ family protein n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QDK1_9SPIR Length = 321 Score = 86.2 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 62/168 (36%), Gaps = 4/168 (2%) Query: 105 ENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAA 163 + + + V L R R+I +G+G SG +A+ A G + Sbjct: 13 LESENLRDLSDKLDIN-FENAVKELFKIRGRVITSGVGKSGHIARKAAATFASTGTPSFF 71 Query: 164 VRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQR 223 V + + DD + S G RE+ + +LR +A+T + L + Sbjct: 72 VDPNECMHGDFGMITKDDYCILYSKGGESREIIELVNWLLRQNISYIAVTNEIDSTLAKN 131 Query: 224 ASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQDLELAPE 269 A L T +E+ A + A L+D L AL++ A + Sbjct: 132 AKIVLLTYVKEEACPLKLAPTVSTTASLALSDALATALMEIRGFRAED 179 >UniRef50_Q9YCQ6 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=9 Tax=Thermoprotei RepID=GLMS_AERPE Length = 617 Score = 85.8 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 55/153 (35%), Gaps = 10/153 (6%) Query: 108 AAMYATLNVNSEE-KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKI----GFNAA 162 A+ T E+ L ++ A R+++ G G S + L ++ G Sbjct: 275 RALAETFEGIIEDPALLRAAGLVAGAGRLLIVGAGTSFHAGLVGHYYLSRLAGILGHPVV 334 Query: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222 A + +++A+S +G + A E G +V+ +T +AL + Sbjct: 335 A----SEHKVYTPGVDGETVVVAVSQSGETYDTLEAVREWRGRGARVIGVTNVVGSALDR 390 Query: 223 RASHCLYTIAEEQATNSASISACHAQGMLTDLL 255 A LY A A+ AQ +L L Sbjct: 391 EADVTLYLRA-GPEIGVAATKTFLAQTILLQTL 422 >UniRef50_B9KZ32 Glucosamine--fructose-6-phosphate aminotransferase, isomerizing n=3 Tax=Bacteria RepID=B9KZ32_THERP Length = 603 Score = 85.8 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 36/189 (19%), Positives = 73/189 (38%), Gaps = 19/189 (10%) Query: 112 ATLNVNSEEKLH---ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKI-GFNAAAVRDM 167 L + E+L + ++R + L G G +G A ++ +I + AV Sbjct: 275 RVLARIARERLDGARQLADLIRHSYGTFLVGCGTAGYAALCGSYLFSRIARRHVNAVI-A 333 Query: 168 HALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHC 227 + L++A++ +G ++ A R G V A+ T + + + A Sbjct: 334 SEFKYQEHFLTDRSLVIALTQSGETIDVIEAVHAAKRRGATVAALVNVTGSTVARLADFT 393 Query: 228 LYTIA--EEQATNSASISACHAQGML------------TDLLFIALIQQDLELAPERIRH 273 + A E+ ++ + +A A +L D L+ A+ ++ LAP + Sbjct: 394 IPLSAGPEQSVLSTKAYTAKLAILLLTAHILNGSEHVGLDTLWRAIEGMEMALAPATLDR 453 Query: 274 SEALVKKLV 282 A+ +LV Sbjct: 454 IRAVADRLV 462 Score = 40.7 bits (95), Expect = 0.056, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 57/181 (31%), Gaps = 17/181 (9%) Query: 40 LANEAGVSQSSVVKFAQKLGYKGFPALKLALS----EALASQPESPSVPIHNQIRGD--D 93 +A V+ S+V + A + LS +++ S + + + Sbjct: 375 VAALVNVTGSTVARLA---------DFTIPLSAGPEQSVLSTKAYTAKLAILLLTAHILN 425 Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWK 153 VG + M L + +++ L A+ + G G S A A K Sbjct: 426 GSEHVGLDTLWRAIEGMEMALAPATLDRIRAVADRLVDAQHCYVIGRGLSYPTALEAALK 485 Query: 154 LMKIG-FNAAAVRDMHALLATVQASSPDDLLLAISYTGVRR-ELNLAADEMLRVGGKVLA 211 + ++ +A + L S R ++ A E+ GG V+ Sbjct: 486 IKEVTYIHAEGFAGGELKHGVIALIEDGSPCLVFSPLDETRADILSGAMEVRSRGGWVIG 545 Query: 212 I 212 I Sbjct: 546 I 546 >UniRef50_C2KEC1 3-hexulose-6-phosphate isomerase n=2 Tax=Lactobacillus RepID=C2KEC1_9LACO Length = 180 Score = 85.8 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 77/178 (43%), Gaps = 10/178 (5%) Query: 103 IKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAA 162 K + + T + K+ E + ++ +A+ + L+G G SGL+ A +L +IG + Sbjct: 5 FKAISNELQHTSCSLTVNKMDEIIQIILNAKTLFLSGEGRSGLMIAGLANRLTQIGLDTH 64 Query: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222 + T A S +D+L+ S +G LN A+ ++G ++ T + L + Sbjct: 65 LSSE-----LTAPAISKNDVLIFNSASGTSTLLNSQAETAKKLGALIITFTTNENSPLAK 119 Query: 223 RASHCLYTIAEEQATNSAS---ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 ++ + A+ + + + S + + + Q L LF LI + L+ + Sbjct: 120 KSDKMIIINAQSKDSYTGSIQPMGSLYEQYSLL--LFDTLILRMLKKGYINAHKLREM 175 >UniRef50_B1I1Y6 Glucosamine--fructose-6-phosphate aminotransferase, isomerizing n=5 Tax=Bacteria RepID=B1I1Y6_DESAP Length = 609 Score = 85.8 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 61/165 (36%), Gaps = 16/165 (9%) Query: 101 KLIKENTAAMYATLN-VNSEEKLHECVTML-------RSARRIILTGIGAS---GLVAQN 149 K I E A+ TL ++ + L ++ +I +T G + G+V + Sbjct: 254 KEIHEQPRALRDTLRGRIDDDCRRAVLDELNLEPGFVKNLNKIFVTACGTAFHAGVVGKY 313 Query: 150 FAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKV 209 KL+++ P DL++ +S +G + A E G +V Sbjct: 314 IIEKLVRLPVEVDI---ASEFRYRDPLIGPGDLVVVVSQSGETADTRAALREAKSRGARV 370 Query: 210 LAITGFTPNALQQRASHCLYT-IAEEQATNSA-SISACHAQGMLT 252 +AIT +++ + A LYT E A S + A L Sbjct: 371 VAITNVVGSSIAREADSVLYTWAGPEIAVASTKAYVTQLAAFYLL 415 >UniRef50_C0W508 RpiR family transcriptional regulator n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W508_9ACTO Length = 181 Score = 85.8 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 23/172 (13%), Positives = 51/172 (29%), Gaps = 6/172 (3%) Query: 110 MYATLNVNSEEKLHECVTMLRS-ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH 168 + A+ + +L RR+ L + + V + FA L + N + Sbjct: 8 LQASSRSLDAAVFEKVADLLADENRRLHLAAVASGRPVMRYFATLLGYLRGNVVLLDGPD 67 Query: 169 ALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL 228 D +++ + + + G + +T L H L Sbjct: 68 VWAHAAAGIDSDSVVMVSVFDRSPAPVAALIETASEAGASTVMVTNRPGGPLTAEVDHLL 127 Query: 229 YTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ + + + L A+ + +E A ER E ++ Sbjct: 128 AITSQSSPM----FRSRVPLMAVLEALLDAICVR-VEGADERAGRIEEFFER 174 >UniRef50_Q6ET44 Os02g0158300 protein n=7 Tax=Magnoliophyta RepID=Q6ET44_ORYSJ Length = 344 Score = 85.0 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 36/169 (21%), Positives = 63/169 (37%), Gaps = 7/169 (4%) Query: 102 LIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGF- 159 L + + + L A + TG+G SG+VA+ A L +GF Sbjct: 27 LFGAQRRHLDHFFDRLDLSQAAAFAQALVDAPGAVFFTGVGKSGIVARKLAQTLASLGFT 86 Query: 160 NAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGF---T 216 A + + AL + + P DLL+ +S +G EL A G ++++T Sbjct: 87 RAGFLSPVDALHGDIGSVFPGDLLVLLSKSGASDELLALAPCARAKGAHLISLTSAASGA 146 Query: 217 PNALQQRAS--HCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQD 263 L L AE A +++ Q + D + A+++ Sbjct: 147 DCPLAAVCDLNVHLPLQAEVCPFGLAPVTSTAIQMVFGDTVVAAIMEAR 195 >UniRef50_A1VGM9 KpsF/GutQ family protein n=1 Tax=Desulfovibrio vulgaris DP4 RepID=A1VGM9_DESVV Length = 339 Score = 84.7 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 36/169 (21%), Positives = 64/169 (37%), Gaps = 4/169 (2%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRS-ARRIILTGIGASGLVAQNFAWKLMKI 157 ++++ A+ + V L + RI +TG+G SG V + A L Sbjct: 31 AASVLQQEAHALTLLARGLDT-SFCDAVDCLYGISGRIAVTGMGKSGHVGRKVAATLAST 89 Query: 158 GFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTP 217 G A + A + +D +LA S +G EL+ R G ++ +T + Sbjct: 90 GSPAYFIHPSEASHGDLGMLVSNDAVLAFSNSGNTAELSDIILYSARRGIPLIGVTRNSD 149 Query: 218 NALQQRASHCLYTI--AEEQATNSASISACHAQGMLTDLLFIALIQQDL 264 + L + ++H L E A ++ Q L D L + L+ Sbjct: 150 SLLGKHSTHLLLLPLVPEADPLGCAPTTSTTLQMALGDALALTLMCHRG 198 >UniRef50_Q9ZD42 Uncharacterized protein RP505 n=16 Tax=cellular organisms RepID=Y505_RICPR Length = 319 Score = 84.7 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 38/176 (21%), Positives = 74/176 (42%), Gaps = 3/176 (1%) Query: 91 GDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS-ARRIILTGIGASGLVAQN 149 + R++ +++I T+A+ TL+ N + + L S RIILTGIG SG +A+ Sbjct: 3 NTNNYRIIAKRVISSATSALE-TLSNNIPSDFNRIIEFLLSFKGRIILTGIGKSGYIARK 61 Query: 150 FAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKV 209 A G + + A + + +DL++ +S +G +EL + K+ Sbjct: 62 IAASFSSTGMPSFYLHPAEASHGDLGMITRNDLVMMLSNSGETKELFNIIEYCNNSSIKI 121 Query: 210 LAITGFTPNALQQRASHCLYTIA-EEQATNSASISACHAQGMLTDLLFIALIQQDL 264 A+T + L +R+ L +E + + L D + + ++ Sbjct: 122 AAMTMNKNSTLAKRSDFLLKIPECQEASLIGTPTISSLIMLSLGDAIMTVIHEERG 177 >UniRef50_C9KLZ5 3-hexulose-6-phosphate isomerase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KLZ5_9FIRM Length = 179 Score = 84.3 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 34/150 (22%), Positives = 65/150 (43%), Gaps = 9/150 (6%) Query: 107 TAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD 166 + + E+K+ + +L++ RI + G G SGL+ + FA +LM++GF + V + Sbjct: 8 VEEIQRSAAKVPEDKITSLIQLLQTHPRIFVCGTGRSGLMLKTFAMRLMQLGFTSFVVGE 67 Query: 167 MHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASH 226 DLLL S +G + AA++ G V+++T ++L Sbjct: 68 TTTPSVQ-----KGDLLLVASASGETGSVVQAAEKARATGVTVISLTASEKSSLSAIVPP 122 Query: 227 CLYTIAEEQATNSAS----ISACHAQGMLT 252 L A + +S + + + Q +L Sbjct: 123 FLLLDAGTKFAHSEASVQPLGSLFEQMLLV 152 >UniRef50_Q9M1T1 Sugar-phosphate isomerase-like protein n=10 Tax=Embryophyta RepID=Q9M1T1_ARATH Length = 350 Score = 84.3 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 36/194 (18%), Positives = 71/194 (36%), Gaps = 11/194 (5%) Query: 79 ESPSVPIHNQIRGDDPLRLVGE----KLIKENTAAMYATLNVNSEEK---LHECVTMLRS 131 + S+ ++ G + + L K + + +L + Sbjct: 10 DFSSIDHNSLKNGGSSHQEISHDNLLNLFKSQQDLLNHFFKHLDLSQTLDFSRI--LLST 67 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGV 191 + TG+G S VA + L+ + F ++ + + AL + A SP D+L+ S +G Sbjct: 68 TGTVFFTGVGKSAFVANKVSQTLVSLSFRSSFLSPLDALHGDIGALSPRDVLVFFSKSGA 127 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRAS--HCLYTIAEEQATNSASISACHAQG 249 EL G ++++T + N L L E N A +++ Q Sbjct: 128 TEELLRLVPCARAKGAFLVSLTSVSGNPLAGVCDMNVHLPLQRELCPFNLAPVTSTAIQM 187 Query: 250 MLTDLLFIALIQQD 263 + D + +AL+ Sbjct: 188 VFGDTIAVALMAAR 201 >UniRef50_Q7UL04 Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica RepID=Q7UL04_RHOBA Length = 419 Score = 84.3 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 2/126 (1%) Query: 135 IILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRE 194 I+LTG+G +GL+AQ L G A + + A+ + DL++A S +G E Sbjct: 108 IVLTGVGKAGLIAQKLVATLASTGSPAHFLHPIEAVHGDLGRVQSKDLVIAFSNSGRSEE 167 Query: 195 LNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQ-ATNSASISACHAQGMLT 252 + + + ++A+T N L + A H + E A S+ + Sbjct: 168 VVRVVEYLKHQACGIIAVTADRENPLAELADHVVPIGRHREACPDGLAPTSSTSVMLAVG 227 Query: 253 DLLFIA 258 D + + Sbjct: 228 DAIAVL 233 >UniRef50_C6JKU7 Putative uncharacterized protein n=2 Tax=Fusobacterium RepID=C6JKU7_FUSVA Length = 271 Score = 84.3 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 34/228 (14%), Positives = 79/228 (34%), Gaps = 20/228 (8%) Query: 2 NGLLRIRQRYQG--LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 N L R+ L ++ +A LL+ + LS ++A VS+S++ KF + L Sbjct: 9 NFLNRLLAMLNDNDLDSTNYHIAMTLLMNFYSLYKLSIGEVAKLCSVSKSTISKFIRVLN 68 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKL-IKENTAAMYATLNVNS 118 ++ + + + + + + EK + ++ + Sbjct: 69 FEDYADFR--------ASAYFKENRYGYNLNYNQNIAEYIEKYGYSSYLKCIQQDIDSLN 120 Query: 119 EEK----LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATV 174 E+ + + L +++ G+ S + A + KL G D + Sbjct: 121 REENLKNIEKLAQDLTHYKKVASFGLLFSEIGAIDLQMKLAYNGKFLITNLDDVKQDTFI 180 Query: 175 QASSPDDLLLAISYTGVRRELNLAADEMLRV-----GGKVLAITGFTP 217 + + + L++ S +G + ++ K++ ITG Sbjct: 181 RRADEETLIIIYSNSGFYLKKYQLSEFQEEKDYSRIKAKIVLITGNEK 228 >UniRef50_O26273 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=5 Tax=Euryarchaeota RepID=GLMS_METTH Length = 590 Score = 84.3 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 68/217 (31%), Gaps = 9/217 (4%) Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 L++ E + E S+ + K I E +A+ TL E + Sbjct: 219 DLRVTDMEGNTVEKEVHSIDWSADMAEKGGYDHFMLKEIHEEPSAVRDTLTEWDE--VLG 276 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKL-MKIGFNAAAVRDMHALLATVQASSPDDLL 183 V + RI G S + + +G + + A + L Sbjct: 277 VVEEIGEVERICFVACGTSYHASLVGKYLFESLLGIPTDVIL-ASEFRYSAGALNDRTLA 335 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + IS +G + A K LAI ++ + A H LYT A A+ Sbjct: 336 IFISQSGETADTLNALRAANSR-AKTLAIVNVLGSSATREAQHVLYTRA-GPEIGVAATK 393 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +Q + ++ + +R+ +++ Sbjct: 394 TYVSQLTVI---YMLVAAMGAPELMDRLERVPEFMER 427 Score = 42.3 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 38/121 (31%), Gaps = 16/121 (13%) Query: 114 LNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLAT 173 + E+ + E G G + A A KL +I +H Sbjct: 427 RALEDEDGIKELAATCSDVSDFFFIGRGFAYPTALEGALKLKEI-------TYIHGEGYA 479 Query: 174 VQASSPDDL--------LLAISYTGVRRE-LNLAADEMLRVGGKVLAITGFTPNALQQRA 224 L ++AIS G + +E+ G +V+ + + +L++ A Sbjct: 480 AGELKHGPLALIDNGVPVVAISPPGPCHDKTLSNVEEVRARGARVIGVGSISDESLRKEA 539 Query: 225 S 225 Sbjct: 540 D 540 >UniRef50_B1L6C6 Glutamine--fructose-6-phosphate transaminase (Isomerizing) n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L6C6_KORCO Length = 327 Score = 83.9 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 76/185 (41%), Gaps = 8/185 (4%) Query: 103 IKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKI-GFNA 161 I E A+ TL S E + E +L ++ I +TG G+S + + L +I G A Sbjct: 5 INEQPEAIARTLKECSNE-VSEAAKLLDNS-FIYVTGSGSSYHSSLVLSRALSRIAGLRA 62 Query: 162 AAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRV--GGKVLAITGFTPNA 219 A+ P+ L+AIS +G ++ A + + +L+IT + Sbjct: 63 TAIPASELPEWIPGEL-PNSSLVAISQSGESIDVINAVESFRKASPESPILSITNTRNST 121 Query: 220 LQQRASHCLYTIAEEQATNSA--SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 L + + + T A E+ +A + + A L L + +D+E + Sbjct: 122 LHKISDVSIITRAGEERAIAATKTYTTQLAASYLLSLELAGIRGKDIEELRRELERVPDA 181 Query: 278 VKKLV 282 +++++ Sbjct: 182 IREIL 186 >UniRef50_C3MFV3 Sugar isomerase, KpsF/GutQ family protein n=8 Tax=Rhizobiaceae RepID=C3MFV3_RHISN Length = 336 Score = 83.9 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 74/182 (40%), Gaps = 11/182 (6%) Query: 94 PLRLVGEKLIKENTAA---MYATLNVNSEEK-----LHECVTML-RSARRIILTGIGASG 144 + + + + T A + A + ++ L E V ++ R++++G+G SG Sbjct: 12 SPSAILDSIGRTLTTASNGIKALAEHLATDESFAQSLVEAVELVGDGHGRVVVSGVGKSG 71 Query: 145 LVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLR 204 + + A L G +A V A + + DD+L+ +S++G EL R Sbjct: 72 HIGRKIAATLASTGTSAYFVHPTEASHGDLGMVTSDDVLILLSWSGETAELANMLTYAKR 131 Query: 205 VGGKVLAITGFTPNALQQRASHCLYTI-AEEQ-ATNSASISACHAQGMLTDLLFIALIQQ 262 +++I+ + L + + L E A ++ Q + D L IAL+++ Sbjct: 132 FKVPIVSISSNRDSILARNSEIALVLPKVPEACPHGLAPTTSAMLQLAVGDALAIALLER 191 Query: 263 DL 264 Sbjct: 192 RG 193 >UniRef50_D1NAS0 KpsF/GutQ family protein n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NAS0_9BACT Length = 325 Score = 83.9 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 63/145 (43%), Gaps = 3/145 (2%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNS---EEKLHECVTMLRSARRIILTGIGASGLVAQNF 150 + ++ + A + + EE + C+ L + ++I TGIG SG + + Sbjct: 4 TVLERAREVFDTEIEGLQAVRDNLNGSFEELVARCMETLSNEGKLIFTGIGKSGYIGKKI 63 Query: 151 AWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVL 210 A L +G + + + A + DLL+A+SY+G EL + + R+G ++ Sbjct: 64 AATLSSVGSPSVFMHPVEARHGDLGMIQKHDLLIALSYSGETEELLVVLNPAKRLGVQLA 123 Query: 211 AITGFTPNALQQRASHCLYTIAEEQ 235 AIT + L + + + ++ Sbjct: 124 AITASAGSTLGRMSDLVVEMPVPQE 148 >UniRef50_C9YDK4 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YDK4_9BURK Length = 231 Score = 83.9 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 61/191 (31%), Gaps = 32/191 (16%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR----RIILTGIGASGLVAQNFAWKL 154 + + L + + L AR + G G S + +FA L Sbjct: 43 AAAFTRSYFEYLGEVLRGIDPDAVARLAQTLLDARDSGATVYFIGNGGSAATSSHFANDL 102 Query: 155 MKIG-------FNAAAVRDMHALLATVQA---------------SSPDDLLLAISYTGVR 192 IG F ++ D A++ + + P D+++ +S +G Sbjct: 103 S-IGTNSYDKPFRVVSLTDNQAIITAIGNDFGYEDIFVRQLQVLARPGDVVIGVSASGNS 161 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLT 252 L A + K +AIT F L+ A ++ + A + M+ Sbjct: 162 PNLVKAFEYARSRSIKTVAITAFDGGKLKAMADDGVHVPTAPKEYGPAEDA-----HMVL 216 Query: 253 DLLFIALIQQD 263 D L A + + Sbjct: 217 DHLLGAYLMRM 227 >UniRef50_UPI00019F1EA3 transcriptional regulator, RpiR family protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI00019F1EA3 Length = 251 Score = 83.5 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 92/271 (33%), Gaps = 22/271 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + +++ + + +++ ++ Y+L A L+S ++ + SQ S+V+FAQ LGY Sbjct: 1 MNIIEQLQLLVKTGSHTEQTISRYILATLSGAEKLTSTAISKKTHTSQPSIVRFAQALGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF + K L + L S+P + + + + I N A T Sbjct: 61 TGFTSFKYDLIKCLRSEPAALLPAQAARNNI------ILGEFINNNNPAAINTF------ 108 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ S+R + G + N IG V +A + + Sbjct: 109 -----FEIISSSRNLYFCHSRELGSLLSNIIQDYSDIGKVCIPVEYQNADSLLANSLTDC 163 Query: 181 DLLLAISYTG-VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D ++ + G N + LA+ A LYT + S Sbjct: 164 DSVILL--PGPKDEPDNQLITLIREHEAASLAVACHQSGT--SLADVTLYTPQSSVSPLS 219 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPER 270 + + L + + E + Sbjct: 220 FAALKMSLHTLFFHALQYCYLNMNNEKTSHK 250 >UniRef50_D0XK10 KpsF/GutQ family protein n=1 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XK10_9CAUL Length = 332 Score = 83.5 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 39/173 (22%), Positives = 66/173 (38%), Gaps = 4/173 (2%) Query: 95 LRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWK 153 + +I+ N A+ A + ++ S +++TGIG SG + A Sbjct: 17 MTEHARSVIRLNIEALQALERTVD-ASVARACDIILSRPGYVVVTGIGKSGHIGGKIAAT 75 Query: 154 LMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 L G NA V + D LLAIS +G REL R G V+ +T Sbjct: 76 LASTGTNAFFVHPAEMSHGDLGMLRHDTTLLAISNSGESRELRDPLLFCQRNGIPVIGMT 135 Query: 214 GFTPNALQQRASH--CLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDL 264 + L + ++ + ++AE A ++ L D L + L+ + Sbjct: 136 QRGSSFLARMSAVAMVMPSVAEACPNGLAPTTSTLMTLALGDALAMVLMNRRG 188 >UniRef50_C1ZGN7 KpsF/GutQ family protein n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZGN7_PLALI Length = 391 Score = 83.5 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 67/178 (37%), Gaps = 5/178 (2%) Query: 89 IRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVA 147 I D LR G ++++ A+ V L + R +I+TGIG +GL+ Sbjct: 24 ITPLDELRE-GREILRTEGQALLDLSRRLD-ASFCAAVEYLSNTRGAVIVTGIGKAGLIG 81 Query: 148 QNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGG 207 Q L G A + AL + PDD++LA S +G EL G Sbjct: 82 QKITATLCSTGSRAYFLHPTEALHGDLGCVGPDDVILAFSNSGETAELLALLPIFEARGI 141 Query: 208 KVLAITGFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQD 263 V+++T + L + + + + A ++ A + D L ++ Sbjct: 142 PVVSVTASPVSTLGRASQVVVTMGRLHECGVQGLAPSTSTTAMLAIGDALAFVTCKRR 199 >UniRef50_B4TGU2 3-hexulose-6-phosphate isomerase n=6 Tax=Bacteria RepID=B4TGU2_SALHS Length = 186 Score = 83.5 bits (206), Expect = 8e-15, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 69/182 (37%), Gaps = 14/182 (7%) Query: 105 ENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAV 164 + + + + + V +++A+ I L G G SG+ + FA +L+ +GF+ + V Sbjct: 9 NILSELQQNAMKIDDAQAAQFVAQIKNAKHIFLQGAGRSGIAIRGFANRLLHLGFSVSVV 68 Query: 165 RDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRA 224 + + + P DL++ S +G L A + + G V +T + + + A Sbjct: 69 GE-----ISSPHTKPGDLVIIGSGSGETGSLVSLAQKAVACGVDVALVTMKAESTIGKLA 123 Query: 225 --SHCLYTIAEEQATNSASISAC-----HAQGMLT--DLLFIALIQQDLELAPERIRHSE 275 + L +E + Q D + + L+ Q E + + Sbjct: 124 KSTLVLPGTVKEDNDREEGAFSQPMGSAFEQLCFITYDAIVLELMAQLGETSDTMFKRHA 183 Query: 276 AL 277 L Sbjct: 184 DL 185 >UniRef50_Q1N8R1 Sugar isomerase, KpsF/GutQ n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N8R1_9SPHN Length = 358 Score = 83.1 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 3/148 (2%) Query: 120 EKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 V ML R R+I+TGIG SG+VA+ L G A + A + + Sbjct: 68 ATFLRMVGMLMKVRGRVIVTGIGKSGIVARKMTATLTSTGTPAIFLHPADAGHGDLGMVT 127 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ--A 236 PDD++L +S++G EL R ++ +T + + Q A C+ ++ Sbjct: 128 PDDVVLMLSHSGESTELGPIIQYCKRFAVPLMGMTAQPQSTVAQAADVCILMPDVQEACP 187 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDL 264 A ++ Q D L ++L++ Sbjct: 188 NALAPTTSTTVQMAFGDALAVSLMEMRG 215 >UniRef50_C9KTU4 Arabinose 5-phosphate isomerase n=31 Tax=Bacteroidales RepID=C9KTU4_9BACE Length = 201 Score = 83.1 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 73/186 (39%), Gaps = 9/186 (4%) Query: 98 VGEKLIKENTAAMYATLNVNSEEKLHECVTML-----RSARRIILTGIGASGLVAQNFAW 152 + + + + A LN+ + + + ++ + +++ +G+G +G +A N A Sbjct: 1 MIDSIKQLLQQEAQAVLNIPVTDAYEKAIQLIVEQVHQKNGKLVTSGMGKAGQIAMNIAT 60 Query: 153 KLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRV--GGKVL 210 G + + A + +DLLL IS +G RE+ + K + Sbjct: 61 TFCSTGIPSVFLHPSEAQHGDLGILQKNDLLLLISNSGKTREIVELTRLAHNLDPDLKFI 120 Query: 211 AITGFTPNALQQRASHCLYT--IAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAP 268 ITG + L Q + CL T AE ++ A ++ D+L + +++ Sbjct: 121 VITGNPDSPLAQESDVCLSTGKPAEVCTLGMTPTTSTTAMTVIGDILVVQTMKKTQFTIE 180 Query: 269 ERIRHS 274 E + Sbjct: 181 EYSKRH 186 >UniRef50_A5FSX5 Sugar isomerase (SIS) n=2 Tax=Dehalococcoides RepID=A5FSX5_DEHSB Length = 216 Score = 83.1 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 66/186 (35%), Gaps = 28/186 (15%) Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA- 132 + S+P +P + D + L++ + L + + + ++ A Sbjct: 2 IISKPSNPGSKENTPKTTDSKPEKDMDCLLRGYLGGLSHCLEELTAQDICGVAELIYQAY 61 Query: 133 ---RRIILTGIGASGLVAQNFAWKLMKIG--------FNAAAVRDMHALLATVQA----- 176 R+I + G G S A + A L +IG ++ D A + ++ Sbjct: 62 TRRRQIFIVGNGGSASTASHMARDL-RIGTSLRGKPRLRTCSLADNVAFITSLANDVNYE 120 Query: 177 ----------SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASH 226 P D+L+AIS +G + AA+ G + +TGF L + Sbjct: 121 SIFTEQLIGQIEPGDVLIAISCSGNSANVVRAAEYANECGASTVGLTGFGGGRLLEICDI 180 Query: 227 CLYTIA 232 C+ + Sbjct: 181 CVVLSS 186 >UniRef50_Q3Z924 Glucosamine--fructose-6-phosphate aminotransferase, isomerizing n=5 Tax=Dehalococcoides RepID=Q3Z924_DEHE1 Length = 593 Score = 82.7 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 53/153 (34%), Gaps = 9/153 (5%) Query: 135 IILTGIGASGLVAQNFAWKLMK--IGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVR 192 I+ G+S A + L++ + P L + +S +G Sbjct: 285 ILFLACGSSYHAALTGRY-LVEEHLNIPVRLEVASEFNYMQ--HLPPCKLAVVLSQSGET 341 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLT 252 ++ A + + G ++AIT + + A H +YT A A+ + AQ ++ Sbjct: 342 ADILRAMRRLKQAGCMIVAITNVAGSTAARLADHVIYTQA-GPEIGVAATKSFIAQLVVL 400 Query: 253 DLLFIALIQQDLELAPERIRHSEA---LVKKLV 282 L A + + V+K++ Sbjct: 401 YALCFACASAASPRYQDYLSTMRLLPGAVQKIL 433 Score = 46.9 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 47/146 (32%), Gaps = 10/146 (6%) Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG-FNAAAVRDMHALLATVQA 176 S + + + + A+ G G + +A A KL +I +A Sbjct: 435 SHQNIKDAAIEVAKAKSAFFIGRGINYPIALEGALKLKEISYIHAEGYAAGELKHGPFAL 494 Query: 177 SSPDD-LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 SP+ +L +S + E+ ++ I + L+Q A + + Sbjct: 495 LSPETPVLALVSRDQTYEAMLTGLREIKVRRAPLIVIGEDGDDQLEQLADRVIKIPPFNR 554 Query: 236 ATNSASISACHAQGMLTDLL--FIAL 259 + S ++ LL + A Sbjct: 555 LFSPILFS------VVLQLLAFYAAY 574 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C7MQM6 Transcriptional regulator, RpiR family n=5 Tax=A... 251 3e-65 UniRef50_Q8R7I8 Transcriptional regulator n=3 Tax=Firmicutes Rep... 248 1e-64 UniRef50_C6WFA6 Transcriptional regulator, RpiR family n=2 Tax=A... 247 2e-64 UniRef50_A4F6M8 RpiR-family transcriptional regulator n=7 Tax=Ac... 241 2e-62 UniRef50_C0ZD50 Transcriptional regulator n=32 Tax=Bacillales Re... 239 7e-62 UniRef50_B8E0M8 Transcriptional regulator, RpiR family n=2 Tax=D... 235 1e-60 UniRef50_UPI0001788119 transcriptional regulator, RpiR family n=... 234 2e-60 UniRef50_C6Q8T9 Transcriptional regulator, RpiR family n=1 Tax=T... 234 2e-60 UniRef50_Q8RD36 Uncharacterized HTH-type transcriptional regulat... 233 7e-60 UniRef50_A8FJ30 Possible RpiR family transcriptional regulator n... 232 1e-59 UniRef50_D2AR91 Putative transcriptional regulator, RpiR family ... 232 1e-59 UniRef50_A7GD47 Transcriptional regulator, RpiR family n=10 Tax=... 230 3e-59 UniRef50_Q97MK5 Uncharacterized HTH-type transcriptional regulat... 230 4e-59 UniRef50_A8S9N1 Putative uncharacterized protein n=3 Tax=Bacteri... 229 1e-58 UniRef50_UPI000196C77F hypothetical protein CATMIT_02718 n=1 Tax... 228 2e-58 UniRef50_Q1LPJ6 Transcriptional regulator, RpiR family n=6 Tax=B... 227 3e-58 UniRef50_C4V1J5 RpiR family transcriptional regulator n=1 Tax=Se... 227 4e-58 UniRef50_Q4LA29 Similar to transcriptional regulator n=1 Tax=Sta... 227 4e-58 UniRef50_C4L752 Transcriptional regulator, RpiR family n=4 Tax=B... 226 6e-58 UniRef50_C5C2G7 Transcriptional regulator, RpiR family n=1 Tax=B... 226 6e-58 UniRef50_A8LV24 Transcriptional regulator, RpiR family n=7 Tax=A... 226 7e-58 UniRef50_C0CSK7 Putative uncharacterized protein n=1 Tax=Blautia... 226 7e-58 UniRef50_A0KFB6 Transcriptional regulator, RpiR family n=3 Tax=G... 226 8e-58 UniRef50_C6XNZ1 Transcriptional regulator, RpiR family n=1 Tax=H... 226 8e-58 UniRef50_C5CIM2 Transcriptional regulator, RpiR family n=1 Tax=K... 226 8e-58 UniRef50_B4EZY5 RpiR-family transcriptional regulator n=54 Tax=G... 225 1e-57 UniRef50_A9KIQ0 Transcriptional regulator, RpiR family n=1 Tax=C... 224 2e-57 UniRef50_A1HSQ6 Transcriptional regulator, RpiR family n=1 Tax=T... 224 2e-57 UniRef50_B6ITC5 HTH-type transcriptional regulator hexR, putativ... 224 2e-57 UniRef50_D1YCB1 Transcriptional regulator, RpiR family n=3 Tax=P... 222 9e-57 UniRef50_A4TMJ1 RpiR-family transcriptional regulatory protein n... 221 2e-56 UniRef50_C6D7K6 Transcriptional regulator, RpiR family n=1 Tax=P... 221 2e-56 UniRef50_C6J4B4 Transcriptional regulator n=1 Tax=Paenibacillus ... 221 2e-56 UniRef50_P44540 Uncharacterized HTH-type transcriptional regulat... 220 3e-56 UniRef50_Q1QSE2 Transcriptional regulator, RpiR family n=28 Tax=... 220 3e-56 UniRef50_C4FUK3 Putative uncharacterized protein n=1 Tax=Catonel... 220 4e-56 UniRef50_C6J1X3 RpiR family transcriptional regulator n=2 Tax=Ba... 220 4e-56 UniRef50_A5L3V2 Transcriptional regulator, RpiR family protein n... 220 4e-56 UniRef50_C0ZJF9 Transcriptional regulator n=1 Tax=Brevibacillus ... 220 4e-56 UniRef50_P46118 HTH-type transcriptional regulator hexR n=302 Ta... 219 8e-56 UniRef50_C0Z7S3 Transcriptional regulator n=1 Tax=Brevibacillus ... 218 1e-55 UniRef50_C2L140 RpiR family transcriptional regulator n=6 Tax=Cl... 218 2e-55 UniRef50_A9KMQ5 Transcriptional regulator, RpiR family n=1 Tax=C... 218 2e-55 UniRef50_C2D8M2 Possible transcriptional regulator n=1 Tax=Atopo... 218 2e-55 UniRef50_C4G9W4 Putative uncharacterized protein n=1 Tax=Shuttle... 217 3e-55 UniRef50_B2TJ91 Transcriptional regulator, RpiR family n=1 Tax=C... 217 4e-55 UniRef50_C0D6A5 Putative uncharacterized protein n=1 Tax=Clostri... 217 5e-55 UniRef50_C6L9A2 Transcriptional regulator, RpiR family n=1 Tax=B... 216 6e-55 UniRef50_A6LRF3 Transcriptional regulator, RpiR family n=2 Tax=B... 216 8e-55 UniRef50_A8RI47 Putative uncharacterized protein n=1 Tax=Clostri... 215 1e-54 UniRef50_C4KZ09 Transcriptional regulator, RpiR family n=85 Tax=... 215 1e-54 UniRef50_UPI000197C448 transcriptional regulator n=1 Tax=Provide... 215 2e-54 UniRef50_A6UCC0 Transcriptional regulator, RpiR family n=4 Tax=P... 215 2e-54 UniRef50_A7VQA6 Putative uncharacterized protein n=1 Tax=Clostri... 215 2e-54 UniRef50_C9AZQ1 Phosphosugar isomerase transcriptional regulator... 215 2e-54 UniRef50_D1ALE3 Transcriptional regulator, RpiR family n=1 Tax=S... 214 2e-54 UniRef50_B5I8T9 Sugar isomerase n=1 Tax=Streptomyces sviceus ATC... 214 2e-54 UniRef50_UPI0001789683 transcriptional regulator, RpiR family n=... 214 3e-54 UniRef50_B0N1V0 Putative uncharacterized protein n=2 Tax=Bacteri... 214 3e-54 UniRef50_Q9CKN4 Putative uncharacterized protein n=1 Tax=Pasteur... 214 3e-54 UniRef50_A8RRF4 Putative uncharacterized protein n=5 Tax=Clostri... 213 5e-54 UniRef50_UPI0001693BD8 YbbH n=1 Tax=Paenibacillus larvae subsp. ... 213 5e-54 UniRef50_C8NZR0 RpiR family transcriptional regulator n=1 Tax=Er... 212 8e-54 UniRef50_A6LVH8 Transcriptional regulator, RpiR family n=8 Tax=F... 212 9e-54 UniRef50_A6LUR0 Transcriptional regulator, RpiR family n=2 Tax=C... 212 1e-53 UniRef50_A8RWE9 Putative uncharacterized protein n=1 Tax=Clostri... 212 1e-53 UniRef50_C1PDB4 Transcriptional regulator, RpiR family n=1 Tax=B... 212 2e-53 UniRef50_B8KWX3 Bifunctional protein glk n=3 Tax=unclassified Ga... 211 2e-53 UniRef50_C4DDH7 Transcriptional regulator, RpiR family n=1 Tax=S... 211 3e-53 UniRef50_B1YJ20 Transcriptional regulator, RpiR family n=1 Tax=E... 210 4e-53 UniRef50_B6GA31 Putative uncharacterized protein n=1 Tax=Collins... 210 4e-53 UniRef50_P26833 Uncharacterized HTH-type transcriptional regulat... 210 5e-53 UniRef50_A8F3D9 Transcriptional regulator, RpiR family n=1 Tax=T... 209 8e-53 UniRef50_Q02VU4 Transcriptional regulator n=4 Tax=Lactococcus la... 209 9e-53 UniRef50_Q3JNN8 Transcriptional regulator, RpiR family n=54 Tax=... 209 1e-52 UniRef50_C3WE65 Transcriptional regulator n=5 Tax=Fusobacterium ... 209 1e-52 UniRef50_A8FIY5 Possible RpiR family transcriptional regulator n... 209 1e-52 UniRef50_C2D3P4 RpiR family transcriptional regulator (Fragment)... 208 1e-52 UniRef50_Q184N2 Putative phosphosugar-binding transcriptional re... 208 2e-52 UniRef50_C8W838 Transcriptional regulator, RpiR family n=1 Tax=A... 207 2e-52 UniRef50_Q45581 Uncharacterized HTH-type transcriptional regulat... 207 3e-52 UniRef50_A0AJB4 Complete genome n=7 Tax=Bacillales RepID=A0AJB4_... 207 3e-52 UniRef50_C3RKW6 Sugar isomerase n=3 Tax=Bacteria RepID=C3RKW6_9MOLU 207 4e-52 UniRef50_C2JLW7 Bifunctional RpiR family transcriptional regulat... 207 4e-52 UniRef50_P37767 Uncharacterized HTH-type transcriptional regulat... 206 6e-52 UniRef50_Q2G836 Transcriptional regulator, RpiR family n=4 Tax=P... 206 7e-52 UniRef50_C3RM33 Sugar isomerase n=2 Tax=Bacteria RepID=C3RM33_9MOLU 206 7e-52 UniRef50_Q04DU1 Transcriptional regulator n=2 Tax=Oenococcus oen... 206 9e-52 UniRef50_A5EB66 Transcriptional regulator, RpiR family n=1 Tax=B... 206 9e-52 UniRef50_B7GUA9 Transcriptional regulator, RpiR family n=7 Tax=B... 205 1e-51 UniRef50_D1AUV3 Transcriptional regulator, RpiR family n=5 Tax=B... 205 1e-51 UniRef50_C0D4M2 Putative uncharacterized protein n=1 Tax=Clostri... 205 1e-51 UniRef50_C2C2H3 Bifunctional RpiR family transcriptional regulat... 205 1e-51 UniRef50_C4L7F8 Transcriptional regulator, RpiR family n=2 Tax=G... 205 2e-51 UniRef50_A9BH25 Transcriptional regulator, RpiR family n=1 Tax=P... 205 2e-51 UniRef50_C2D9S0 RpiR family transcriptional regulator n=1 Tax=At... 204 3e-51 UniRef50_A9M040 RpiR/YebK/YfhH family transcriptional regulator ... 204 3e-51 UniRef50_C1I531 Transcriptional regulator n=1 Tax=Clostridium sp... 204 4e-51 UniRef50_A0JVW9 Transcriptional regulator, RpiR family n=2 Tax=A... 204 4e-51 UniRef50_A9BXM8 Transcriptional regulator, RpiR family n=16 Tax=... 204 4e-51 UniRef50_Q9WYG1 Uncharacterized HTH-type transcriptional regulat... 204 4e-51 UniRef50_Q13K65 Transcriptional regulator, RpiR family n=7 Tax=B... 203 4e-51 UniRef50_A4VXR0 Transcriptional regulator n=5 Tax=Streptococcus ... 203 5e-51 UniRef50_A1AYM0 Transcriptional regulator, RpiR family n=3 Tax=P... 203 5e-51 UniRef50_D0W145 Transcriptional regulator HexR n=3 Tax=Neisseria... 203 6e-51 UniRef50_D0GPL3 Transcriptional regulator, RpiR family n=1 Tax=L... 203 7e-51 UniRef50_Q9K6Z8 Transcriptional regulator (Hex regulon repressor... 203 7e-51 UniRef50_D1AG49 Transcriptional regulator, RpiR family n=1 Tax=S... 202 9e-51 UniRef50_C5CG85 Transcriptional regulator, RpiR family n=1 Tax=K... 202 1e-50 UniRef50_C8NHI8 Probable transcriptional regulator YbbH n=1 Tax=... 202 2e-50 UniRef50_B9K581 Transcriptional repressor of rpiB expression; tr... 202 2e-50 UniRef50_A1JQZ2 RpiR family regulatory protein n=12 Tax=Enteroba... 201 2e-50 UniRef50_C1XRD4 Transcriptional regulator n=1 Tax=Meiothermus si... 201 2e-50 UniRef50_B1QW74 Transcriptional regulator n=2 Tax=Clostridium bu... 201 3e-50 UniRef50_Q7MD38 Transcriptional regulator n=31 Tax=Gammaproteoba... 201 3e-50 UniRef50_B7RYI4 Transcriptional regulator, RpiR family protein n... 201 3e-50 UniRef50_UPI000196C511 hypothetical protein CATMIT_02677 n=1 Tax... 201 3e-50 UniRef50_A9MIE1 HTH-type transcriptional regulator murR n=48 Tax... 200 4e-50 UniRef50_Q2JBJ8 Transcriptional regulator, RpiR family n=1 Tax=F... 200 5e-50 UniRef50_D0DKU0 Transcriptional regulator n=1 Tax=Lactobacillus ... 200 5e-50 UniRef50_Q03CT7 Transcriptional regulator n=7 Tax=Lactobacillus ... 200 6e-50 UniRef50_C7REF2 Transcriptional regulator, RpiR family n=2 Tax=A... 199 8e-50 UniRef50_B9CM70 Transcriptional regulator, RpiR family n=1 Tax=A... 199 9e-50 UniRef50_D2PUN7 Transcriptional regulator, RpiR family n=1 Tax=K... 199 9e-50 UniRef50_C1PED1 Transcriptional regulator, RpiR family n=1 Tax=B... 199 1e-49 UniRef50_Q38YX9 Gluconate operon transcriptional regulator, RpiR... 199 1e-49 UniRef50_A8UBX8 Phosphosugar-binding transcriptional regulator, ... 199 1e-49 UniRef50_Q03YQ8 Transcriptional regulator n=4 Tax=Leuconostocace... 198 2e-49 UniRef50_A4EAC5 Putative uncharacterized protein n=2 Tax=Collins... 198 2e-49 UniRef50_A6T0F7 Transcriptional regulator, RpiR family n=2 Tax=O... 198 2e-49 UniRef50_C3JIB3 RpiR-family transcriptional regulator n=2 Tax=Rh... 197 2e-49 UniRef50_Q03HR4 Transcriptional regulator, RpiR family n=2 Tax=P... 197 3e-49 UniRef50_Q2J8J9 Transcriptional regulator, RpiR family n=1 Tax=F... 197 3e-49 UniRef50_C0CU66 Putative uncharacterized protein n=2 Tax=Clostri... 197 3e-49 UniRef50_C6JFM8 Transcriptional regulator n=2 Tax=Clostridiales ... 197 3e-49 UniRef50_A9NEV7 Transcriptional regulator, RpiR family n=1 Tax=A... 197 4e-49 UniRef50_C8JWL0 Phosphosugar-binding transcriptional regulator n... 197 5e-49 UniRef50_C0R285 Transcriptional regulator n=1 Tax=Brachyspira hy... 196 6e-49 UniRef50_A8RZI5 Putative uncharacterized protein n=1 Tax=Clostri... 196 6e-49 UniRef50_B5FDJ7 Transcriptional regulator, RpiR family protein n... 196 8e-49 UniRef50_Q2SNY6 Transcriptional regulator n=1 Tax=Hahella chejue... 196 9e-49 UniRef50_C2D9G3 RpiR family transcriptional regulator n=1 Tax=At... 196 9e-49 UniRef50_Q6AH41 Transcriptional regulator, RpiR family n=1 Tax=L... 195 1e-48 UniRef50_A8UCF6 Phosphosugar-binding transcriptional regulator, ... 195 1e-48 UniRef50_B6G0W9 Putative uncharacterized protein n=1 Tax=Clostri... 195 2e-48 UniRef50_Q040R4 Transcriptional regulator n=8 Tax=Lactobacillus ... 195 2e-48 UniRef50_A0Z4E2 Transcriptional regulator n=3 Tax=Bacteria RepID... 194 2e-48 UniRef50_B5HLI6 RpiR-family transcriptional regulator n=3 Tax=St... 194 2e-48 UniRef50_B9NXN7 Bifunctional protein glk n=2 Tax=Rhodobacteracea... 194 3e-48 UniRef50_C5C1Y9 Transcriptional regulator, RpiR family n=1 Tax=B... 194 3e-48 UniRef50_Q03Q61 Transcriptional regulator n=1 Tax=Lactobacillus ... 194 4e-48 UniRef50_A8SDH7 Putative uncharacterized protein n=1 Tax=Faecali... 194 4e-48 UniRef50_C0X1P6 Transcriptional regulator RpiR n=21 Tax=Enteroco... 194 4e-48 UniRef50_C1IBM1 Phosphosugar-binding transcriptional regulator n... 193 5e-48 UniRef50_C2H8J8 Bifunctional RpiR family transcriptional regulat... 193 5e-48 UniRef50_Q1WQV4 Transcriptional regulator, RpiR family n=4 Tax=L... 193 5e-48 UniRef50_A2RL41 Transcriptional regulator, RpiR family n=4 Tax=L... 193 6e-48 UniRef50_D0RS60 RpiR family transcriptional regulator n=2 Tax=La... 193 8e-48 UniRef50_C5BVH6 Transcriptional regulator, RpiR family n=2 Tax=A... 192 9e-48 UniRef50_C8SX74 Transcriptional regulator, RpiR family n=1 Tax=M... 192 9e-48 UniRef50_C0X148 RpiR family transcriptional regulator n=22 Tax=E... 192 1e-47 UniRef50_A4WDW6 Transcriptional regulator n=10 Tax=Enterobacteri... 192 1e-47 UniRef50_C9L6X6 Transcriptional regulator, RpiR family n=1 Tax=B... 192 1e-47 UniRef50_C2HLD1 Transcriptional regulator n=3 Tax=Lactobacillus ... 192 1e-47 UniRef50_B9YAK0 Putative uncharacterized protein n=1 Tax=Holdema... 192 2e-47 UniRef50_Q28KP3 Transcriptional regulator, RpiR family n=6 Tax=A... 191 2e-47 UniRef50_A1BB20 Transcriptional regulator, RpiR family n=1 Tax=P... 191 2e-47 UniRef50_B7RLA4 Transcriptional regulator, RpiR family n=1 Tax=R... 191 2e-47 UniRef50_B1R0U2 Transcriptional regulator, RpiR family n=9 Tax=F... 191 2e-47 UniRef50_Q0BBX6 Transcriptional regulator, RpiR family n=65 Tax=... 191 2e-47 UniRef50_D0XGH5 Putative uncharacterized protein n=1 Tax=Vibrio ... 190 3e-47 UniRef50_UPI000197BCAC RpiR family transcriptional regulator n=1... 190 3e-47 UniRef50_D2AGN5 Transcriptional regulator, RpiR family n=1 Tax=S... 190 3e-47 UniRef50_A8RDU7 Putative uncharacterized protein n=1 Tax=Eubacte... 190 3e-47 UniRef50_C6VNS3 Transcription regulator n=3 Tax=Lactobacillus pl... 190 5e-47 UniRef50_D1AYR1 Transcriptional regulator, RpiR family n=2 Tax=F... 190 5e-47 UniRef50_D1PSB4 Transcriptional regulator n=3 Tax=Clostridiales ... 190 5e-47 UniRef50_B0NYS8 Putative uncharacterized protein n=2 Tax=Clostri... 190 6e-47 UniRef50_D0KLH9 Transcriptional regulator, RpiR family n=1 Tax=P... 189 7e-47 UniRef50_A6LRG7 Transcriptional regulator, RpiR family n=2 Tax=F... 189 7e-47 UniRef50_P46117 Uncharacterized HTH-type transcriptional regulat... 189 8e-47 UniRef50_Q71VW8 Phosphosugar-binding transcriptional regulator, ... 189 9e-47 UniRef50_Q03CI3 Transcriptional regulator n=10 Tax=Lactobacillac... 189 1e-46 UniRef50_D0I0X8 Sialic acid utilization regulator RpiR family n=... 188 2e-46 UniRef50_B9DJX2 Putative RpiR family transcriptional regulator n... 188 2e-46 UniRef50_Q1J2N3 Transcriptional regulator, RpiR family n=2 Tax=D... 188 2e-46 UniRef50_C7HWK5 RpiR family phosphosugar-binding transcriptional... 188 2e-46 UniRef50_UPI0001BCD92E RpiR family transcriptional regulator n=1... 187 3e-46 UniRef50_Q02YU6 Transcriptional regulator n=4 Tax=Lactobacillale... 187 3e-46 UniRef50_B6GAC9 Putative uncharacterized protein n=1 Tax=Collins... 187 3e-46 UniRef50_UPI00016A71F3 transcriptional regulator, RpiR family pr... 187 4e-46 UniRef50_C6B6F5 Transcriptional regulator, RpiR family n=7 Tax=A... 187 4e-46 UniRef50_C3RHA3 Transcriptional regulator n=3 Tax=Bacteria RepID... 187 4e-46 UniRef50_A3DDB2 Transcriptional regulator, RpiR family n=5 Tax=C... 187 4e-46 UniRef50_C6VMT8 Transcription regulator n=3 Tax=Lactobacillus pl... 187 5e-46 UniRef50_B7C842 Putative uncharacterized protein n=1 Tax=Eubacte... 187 5e-46 UniRef50_C3RHU3 Transcriptional regulator n=2 Tax=Bacteria RepID... 187 5e-46 UniRef50_C2KD15 RpiR family transcriptional regulator n=3 Tax=La... 186 6e-46 UniRef50_C9A459 Phosphosugar isomerase transcriptional regulator... 186 7e-46 UniRef50_UPI00017F2FF2 transcriptional regulator n=1 Tax=Escheri... 186 8e-46 UniRef50_A9MLD6 Putative uncharacterized protein n=1 Tax=Salmone... 186 9e-46 UniRef50_B7CB00 Putative uncharacterized protein n=1 Tax=Eubacte... 186 9e-46 UniRef50_C5EPZ9 Transcriptional regulator n=2 Tax=Clostridiales ... 185 1e-45 UniRef50_D0R5V5 Transcriptional regulator n=10 Tax=Lactobacillus... 185 1e-45 UniRef50_Q03FC5 Transcriptional regulator n=1 Tax=Pediococcus pe... 185 1e-45 UniRef50_A6D304 DNA-binding transcriptional repressor RpiR n=1 T... 185 1e-45 UniRef50_D2BPE4 Transcriptional regulator, RpiR family n=1 Tax=L... 185 2e-45 UniRef50_D1AK74 Transcriptional regulator, RpiR family n=1 Tax=S... 185 2e-45 UniRef50_C0C246 Putative uncharacterized protein n=2 Tax=Clostri... 185 2e-45 UniRef50_Q15N75 Transcriptional regulator, RpiR family n=1 Tax=P... 185 2e-45 UniRef50_D2ELR8 Transcription regulator n=1 Tax=Pediococcus acid... 184 2e-45 UniRef50_C4FU45 Putative uncharacterized protein n=1 Tax=Catonel... 184 2e-45 UniRef50_B7X566 Transcriptional regulator, RpiR family n=1 Tax=C... 184 2e-45 UniRef50_B5GNW3 RpiR-family transcriptional regulator n=14 Tax=S... 184 2e-45 UniRef50_C6J2D0 Transcription regulator n=1 Tax=Paenibacillus sp... 184 2e-45 UniRef50_C0C5Q9 Putative uncharacterized protein n=1 Tax=Clostri... 184 3e-45 UniRef50_A6UIG8 Transcriptional regulator, RpiR family n=8 Tax=R... 184 3e-45 UniRef50_C8P0W4 RpiR family phosphosugar-binding transcriptional... 184 3e-45 UniRef50_P0ACS8 HTH-type transcriptional regulator rpiR n=34 Tax... 184 4e-45 UniRef50_C7XVK6 6-phospho 3-hexuloisomerase n=1 Tax=Lactobacillu... 184 5e-45 UniRef50_C5D4L1 Transcriptional regulator, RpiR family n=1 Tax=G... 183 5e-45 UniRef50_Q5WK55 RpiR family transcriptional regulator n=1 Tax=Ba... 183 6e-45 UniRef50_B7UNF1 Predicted transcriptional regulator, RpiR family... 183 6e-45 UniRef50_B7LQI9 Transcriptional regulator n=32 Tax=Gammaproteoba... 183 7e-45 UniRef50_D1TJG3 Putative transcriptional regulator, RpiR family ... 182 9e-45 UniRef50_A6UGP6 Transcriptional regulator, RpiR family n=1 Tax=S... 182 1e-44 UniRef50_A8UCF8 Phosphosugar-binding transcriptional regulator, ... 182 2e-44 UniRef50_C0X6G8 RpiR family transcriptional regulator n=23 Tax=E... 181 2e-44 UniRef50_UPI00016945F6 hypothetical protein Plarl_13824 n=1 Tax=... 180 4e-44 UniRef50_Q38V38 Putative transcriptional regulator with a sugari... 180 4e-44 UniRef50_B9E8A7 Putative uncharacterized protein n=1 Tax=Macroco... 180 4e-44 UniRef50_C4KYQ0 Transcriptional regulator, RpiR family n=1 Tax=E... 180 7e-44 UniRef50_Q041H9 Transcriptional regulator n=22 Tax=Lactobacillus... 179 7e-44 UniRef50_C2C459 RpiR family transcriptional regulator n=1 Tax=Li... 179 8e-44 UniRef50_B9Y3J7 Putative uncharacterized protein n=1 Tax=Holdema... 179 9e-44 UniRef50_C3RI81 Sugar isomerase n=1 Tax=Mollicutes bacterium D7 ... 179 1e-43 UniRef50_A8RCR9 Putative uncharacterized protein n=1 Tax=Eubacte... 179 1e-43 UniRef50_UPI00019054B9 hypothetical protein RetlB5_21050 n=1 Tax... 178 1e-43 UniRef50_Q1J381 Transcriptional regulator, RpiR family n=1 Tax=D... 178 1e-43 UniRef50_A9BEU1 Transcriptional regulator, RpiR family n=1 Tax=P... 178 2e-43 UniRef50_B0NJ36 Putative uncharacterized protein n=1 Tax=Clostri... 178 2e-43 UniRef50_B2UK47 Transcriptional regulator, RpiR family n=5 Tax=R... 178 2e-43 UniRef50_B1QVU2 Transcriptional regulator, RpiR family n=9 Tax=C... 178 2e-43 UniRef50_C2KAY2 Transcriptional regulator n=6 Tax=Lactobacillus ... 177 3e-43 UniRef50_C0X0S9 RpiR family transcriptional regulator n=22 Tax=E... 177 3e-43 UniRef50_A9WVK2 Transcriptional regulator, RpiR family n=2 Tax=M... 177 3e-43 UniRef50_Q03HW7 Transcriptional regulator n=13 Tax=Lactobacillal... 177 3e-43 UniRef50_B7IEI4 Transcriptional regulator, RpiR family n=1 Tax=T... 177 3e-43 UniRef50_A8U5E8 Putative uncharacterized protein n=1 Tax=Carnoba... 177 4e-43 UniRef50_Q1YGT9 Putative transcriptional regulator, RpiR family ... 177 4e-43 UniRef50_B9Y4T6 Putative uncharacterized protein n=2 Tax=Holdema... 177 5e-43 UniRef50_C9A857 Transcription regulator n=3 Tax=Enterococcus cas... 176 7e-43 UniRef50_Q1GCY7 Transcriptional regulator, RpiR family n=2 Tax=R... 176 7e-43 UniRef50_A1HTD9 Transcriptional regulator, RpiR family n=1 Tax=T... 176 8e-43 UniRef50_C0XD02 RpiR family transcriptional regulator n=1 Tax=La... 176 9e-43 UniRef50_D1C9F1 Transcriptional regulator, RpiR family n=1 Tax=S... 175 1e-42 UniRef50_A8S4W0 Putative uncharacterized protein n=1 Tax=Clostri... 175 2e-42 UniRef50_C2L0R5 Possible transcriptional regulator RpiR n=1 Tax=... 175 2e-42 UniRef50_Q71W74 Phosphosugar-binding transcriptional regulator, ... 175 2e-42 UniRef50_C3RM35 Transcriptional regulator n=2 Tax=Bacteria RepID... 175 2e-42 UniRef50_C0D858 Putative uncharacterized protein n=1 Tax=Clostri... 174 2e-42 UniRef50_C9XPJ9 RpiR-family transcriptional regulator n=5 Tax=Cl... 174 3e-42 UniRef50_C7T7Y4 Transcriptional regulator n=8 Tax=Lactobacillus ... 174 3e-42 UniRef50_UPI000196B715 hypothetical protein CATMIT_00151 n=1 Tax... 174 3e-42 UniRef50_C8ZYC7 Sugar isomerase n=4 Tax=Enterococcus RepID=C8ZYC... 173 5e-42 UniRef50_C8N6B7 RpiR family phosphosugar-binding transcriptional... 173 6e-42 UniRef50_C6JFN2 Transcriptional regulator n=3 Tax=Clostridiales ... 173 6e-42 UniRef50_A9IGF4 Transcriptional regulator, RpiR family n=10 Tax=... 173 8e-42 UniRef50_C4F999 Putative uncharacterized protein n=1 Tax=Collins... 173 8e-42 UniRef50_C8NE33 RpiR family phosphosugar-binding transcriptional... 172 9e-42 UniRef50_C2LK66 Phosphosugar-binding transcriptional regulator n... 172 9e-42 UniRef50_C3RM54 Putative uncharacterized protein n=2 Tax=Bacteri... 172 1e-41 UniRef50_A5IPI4 Transcriptional regulator, RpiR family n=54 Tax=... 172 1e-41 UniRef50_B0NFU9 Putative uncharacterized protein n=2 Tax=Clostri... 172 1e-41 UniRef50_C8STB5 Transcriptional regulator, RpiR family n=1 Tax=M... 172 1e-41 UniRef50_B1Y2D5 Glucokinase n=1 Tax=Leptothrix cholodnii SP-6 Re... 172 1e-41 UniRef50_C3WAG5 Transcriptional regulator n=1 Tax=Fusobacterium ... 172 2e-41 UniRef50_C9S176 Transcriptional regulator, RpiR family n=2 Tax=G... 172 2e-41 UniRef50_A5VV40 Transcriptional regulator, RpiR family n=37 Tax=... 171 2e-41 UniRef50_A4E6N7 Putative uncharacterized protein n=1 Tax=Collins... 171 2e-41 UniRef50_C3RHU4 Transcriptional regulator n=2 Tax=Bacteria RepID... 171 2e-41 UniRef50_A4CAD1 Transcriptional regulator n=1 Tax=Pseudoalteromo... 171 2e-41 UniRef50_C3RKL9 Sugar isomerase n=3 Tax=Bacteria RepID=C3RKL9_9MOLU 171 3e-41 UniRef50_C2EDG2 RpiR family transcriptional regulator n=1 Tax=La... 170 4e-41 UniRef50_C0ZHI7 Transcriptional regulator n=1 Tax=Brevibacillus ... 170 5e-41 UniRef50_Q0STT6 Transcriptional regulator, RpiR family n=14 Tax=... 170 5e-41 UniRef50_Q4L9T6 Similar to transcriptional regulator n=2 Tax=Sta... 170 7e-41 UniRef50_UPI0001BC57B3 oxygen-independent coproporphyrinogen III... 169 8e-41 UniRef50_C3RR03 Sugar isomerase n=2 Tax=Bacteria RepID=C3RR03_9MOLU 169 8e-41 UniRef50_A8F424 Transcriptional regulator, RpiR family n=1 Tax=T... 169 9e-41 UniRef50_B2IRS9 Phosphosugar-binding transcriptional regulator, ... 169 9e-41 UniRef50_C7TGD6 Transcriptional regulator, RpiR family n=3 Tax=L... 169 1e-40 UniRef50_A6M2X4 Transcriptional regulator, RpiR family n=4 Tax=C... 168 1e-40 UniRef50_B9B6B2 Transcriptional regulator, RpiR family n=3 Tax=B... 168 1e-40 UniRef50_Q9K8R3 BH2940 protein n=4 Tax=Bacillus RepID=Q9K8R3_BACHD 168 2e-40 UniRef50_A6M3B1 Transcriptional regulator, RpiR family n=1 Tax=C... 168 2e-40 UniRef50_C3WA33 Transcriptional regulator n=3 Tax=Fusobacterium ... 168 2e-40 UniRef50_UPI000196B4B9 hypothetical protein CATMIT_00397 n=1 Tax... 168 2e-40 UniRef50_C4Z5R8 N-acylmannosamine kinase n=1 Tax=Eubacterium eli... 168 2e-40 UniRef50_UPI000169311A hypothetical protein Plarl_08670 n=1 Tax=... 168 2e-40 UniRef50_C8QBF9 Transcriptional regulator, RpiR family n=1 Tax=P... 168 2e-40 UniRef50_A8FIJ8 RpiR family transcriptional regulator n=2 Tax=Ba... 168 2e-40 UniRef50_A1WRM9 Transcriptional regulator, RpiR family n=2 Tax=C... 168 2e-40 UniRef50_B0MBA6 Putative uncharacterized protein n=2 Tax=Clostri... 168 2e-40 UniRef50_B4SHK0 Transcriptional regulator, RpiR family n=3 Tax=S... 168 2e-40 UniRef50_A5IV96 Transcriptional regulator, RpiR family n=113 Tax... 168 2e-40 UniRef50_C5RF15 Transcriptional regulator, RpiR family n=1 Tax=C... 168 3e-40 UniRef50_UPI0001BC58DB RpiR family transcriptional regulator n=1... 168 3e-40 UniRef50_UPI0001C36367 transcriptional regulator, RpiR family pr... 167 3e-40 UniRef50_B1Q8U9 Putative phosphosugar-binding transcriptional re... 167 3e-40 UniRef50_C2HCM3 RpiR family transcriptional regulator n=12 Tax=E... 167 4e-40 UniRef50_A0ZNS9 Putative uncharacterized protein n=3 Tax=Photoba... 167 4e-40 UniRef50_Q21ZX8 Transcriptional regulator, RpiR family n=4 Tax=C... 167 4e-40 UniRef50_Q8RAK1 Transcriptional regulator n=1 Tax=Thermoanaeroba... 167 6e-40 UniRef50_C3FD32 Phosphosugar-binding transcriptional regulator n... 166 6e-40 UniRef50_B3EUN5 Transcriptional regulator, RpiR family n=1 Tax=B... 166 6e-40 UniRef50_A5KIQ4 Putative uncharacterized protein n=2 Tax=Ruminoc... 166 7e-40 UniRef50_B2UF98 Transcriptional regulator, RpiR family n=2 Tax=R... 166 7e-40 UniRef50_A6BIK8 Putative uncharacterized protein n=9 Tax=Clostri... 166 8e-40 UniRef50_Q88UA4 Transcription regulator n=1 Tax=Lactobacillus pl... 166 8e-40 UniRef50_C2MLM8 Transcriptional regulator n=1 Tax=Bacillus cereu... 166 8e-40 UniRef50_C7NDE7 Transcriptional regulator, RpiR family n=2 Tax=L... 166 1e-39 UniRef50_C3RH23 Predicted protein n=2 Tax=Bacteria RepID=C3RH23_... 166 1e-39 UniRef50_B9DVM9 RpiR family regulatory protein n=2 Tax=Streptoco... 165 1e-39 UniRef50_B0N5H7 Putative uncharacterized protein n=1 Tax=Clostri... 165 1e-39 UniRef50_C3RJC3 Sugar isomerase n=5 Tax=Bacteria RepID=C3RJC3_9MOLU 165 2e-39 UniRef50_C8Q2X6 Transcriptional regulator, RpiR family n=1 Tax=P... 165 2e-39 UniRef50_B1M7S3 Transcriptional regulator, RpiR family n=1 Tax=M... 165 2e-39 UniRef50_C9KLC1 Transcriptional regulator, RpiR family n=1 Tax=M... 165 2e-39 UniRef50_A4IT25 Transcriptional regulator n=5 Tax=Bacillaceae Re... 165 2e-39 UniRef50_C0BYY2 Putative uncharacterized protein n=1 Tax=Clostri... 165 2e-39 UniRef50_UPI0001B56E76 RpiR family transcriptional regulator n=1... 165 2e-39 UniRef50_A6LS27 Transcriptional regulator, RpiR family n=1 Tax=C... 165 2e-39 UniRef50_C0EW96 Putative uncharacterized protein n=1 Tax=Eubacte... 165 2e-39 UniRef50_B5XS91 Transcriptional regulator, RpiR family n=3 Tax=E... 164 2e-39 UniRef50_D0KI21 Transcriptional regulator, RpiR family n=84 Tax=... 164 3e-39 UniRef50_A6W619 Transcriptional regulator, RpiR family n=1 Tax=K... 164 3e-39 UniRef50_A3IB77 Transcriptional regulator n=1 Tax=Bacillus sp. B... 164 3e-39 UniRef50_C7CRC1 Predicted protein n=24 Tax=Enterococcus RepID=C7... 164 3e-39 UniRef50_C9Q9L7 Helix-turn-helix protein RpiR n=6 Tax=Vibrio Rep... 164 4e-39 UniRef50_C1B8E5 Putative RpiR family transcriptional regulator n... 164 4e-39 UniRef50_A4XR90 Transcriptional regulator, RpiR family n=2 Tax=P... 164 4e-39 UniRef50_C0Q155 Protein rpiR n=2 Tax=Salmonella enterica RepID=C... 163 4e-39 UniRef50_C0C1I3 Putative uncharacterized protein n=1 Tax=Clostri... 163 4e-39 UniRef50_D2AU61 Putative transcriptional regulator, RpiR family ... 163 5e-39 UniRef50_D1BBP1 Transcriptional regulator n=2 Tax=Micrococcineae... 163 6e-39 UniRef50_A0YBK7 Transcriptional regulator n=1 Tax=marine gamma p... 163 7e-39 UniRef50_C0ZE98 Transcriptional regulator n=1 Tax=Brevibacillus ... 163 8e-39 UniRef50_C2APV8 Transcriptional regulator n=1 Tax=Tsukamurella p... 162 9e-39 UniRef50_D2PSH8 Transcriptional regulator, RpiR family n=1 Tax=K... 162 1e-38 UniRef50_C5BXN6 Transcriptional regulator, RpiR family n=1 Tax=B... 162 1e-38 UniRef50_C0DAS9 Putative uncharacterized protein n=1 Tax=Clostri... 162 1e-38 UniRef50_C5EP47 Transcriptional regulator n=2 Tax=Clostridiales ... 162 1e-38 UniRef50_C4Z9F6 N-acetylmannosamine kinase n=4 Tax=Clostridiales... 162 1e-38 UniRef50_B9DT48 RpiR family regulatory protein n=1 Tax=Streptoco... 162 2e-38 UniRef50_A6LTU2 Transcriptional regulator, RpiR family n=3 Tax=C... 161 2e-38 UniRef50_C6JLG4 Predicted protein n=2 Tax=Fusobacterium RepID=C6... 161 2e-38 UniRef50_B2TKZ2 RpiR-family transcriptional regulator n=49 Tax=B... 161 3e-38 UniRef50_A5KNM9 Putative uncharacterized protein n=1 Tax=Ruminoc... 161 3e-38 UniRef50_B9Y4Q7 Putative uncharacterized protein n=3 Tax=Firmicu... 161 3e-38 UniRef50_Q46ZY9 Transcriptional regulator, RpiR family n=74 Tax=... 161 3e-38 UniRef50_Q89XK4 Transcriptional regulatory protein n=1 Tax=Brady... 160 3e-38 UniRef50_UPI0001BC5E7D RpiR family transcriptional regulator n=1... 160 4e-38 UniRef50_B9DUA5 Putative transcriptional regulator n=1 Tax=Strep... 160 4e-38 UniRef50_A4WSY4 Transcriptional regulator, RpiR family n=19 Tax=... 160 5e-38 UniRef50_Q0KEK8 Transcriptional regulator, GlvR-family n=57 Tax=... 160 5e-38 UniRef50_A6DTP0 Putative transcriptional regulator, rpiR family ... 160 5e-38 UniRef50_C8P486 Transcription regulator n=1 Tax=Lactobacillus an... 160 5e-38 UniRef50_A8F3C1 Transcriptional regulator, RpiR family n=7 Tax=T... 160 5e-38 UniRef50_D1AP79 Transcriptional regulator, RpiR family n=1 Tax=S... 160 7e-38 UniRef50_C6JEA0 Transcriptional regulator n=1 Tax=Ruminococcus s... 160 7e-38 UniRef50_C9RVZ8 Transcriptional regulator, RpiR family n=5 Tax=B... 160 7e-38 UniRef50_A9BVS1 Transcriptional regulator, RpiR family n=4 Tax=c... 159 8e-38 UniRef50_B9R568 SIS domain protein n=2 Tax=Labrenzia RepID=B9R56... 159 9e-38 UniRef50_B7GSI0 Transcriptional regulator, RpiR family n=1 Tax=B... 159 1e-37 UniRef50_UPI000196C8C2 hypothetical protein CATMIT_03055 n=1 Tax... 159 1e-37 UniRef50_UPI0000D541FA probable transcriptional regulator n=1 Ta... 158 1e-37 UniRef50_B1KTP2 Transcriptional regulator, RpiR family n=10 Tax=... 158 1e-37 UniRef50_C0CJY4 Putative uncharacterized protein n=1 Tax=Blautia... 158 1e-37 UniRef50_A3X377 SIS domain protein n=5 Tax=Rhodobacteraceae RepI... 158 2e-37 UniRef50_UPI0001C42AD8 transcriptional regulator n=1 Tax=Bacillu... 158 2e-37 UniRef50_Q1JDL9 Transcriptional regulator, RpiR family n=21 Tax=... 158 2e-37 UniRef50_Q2BFK6 Probable glucose kinase n=3 Tax=Firmicutes RepID... 158 2e-37 UniRef50_A1WPP9 Transcriptional regulator, RpiR family n=1 Tax=V... 158 2e-37 UniRef50_C9M9W1 Transcriptional regulator, RpiR family n=1 Tax=J... 158 2e-37 UniRef50_B0PG82 Putative uncharacterized protein n=1 Tax=Anaerot... 157 3e-37 UniRef50_C7HVZ9 RpiR family phosphosugar-binding transcriptional... 157 4e-37 UniRef50_Q9KGC3 BH0181 protein n=3 Tax=Bacillus RepID=Q9KGC3_BACHD 157 4e-37 UniRef50_B1QUP4 Phosphosugar-binding transcriptional regulator, ... 157 4e-37 UniRef50_A1BAR1 Transcriptional regulator, RpiR family n=1 Tax=P... 157 4e-37 UniRef50_A9BZX9 Transcriptional regulator, RpiR family n=1 Tax=D... 157 5e-37 UniRef50_C1TN65 Transcriptional regulator n=1 Tax=Dethiosulfovib... 157 5e-37 UniRef50_A6VVN8 Transcriptional regulator, RpiR family n=1 Tax=M... 157 5e-37 UniRef50_C1I751 Predicted protein n=3 Tax=Bacteria RepID=C1I751_... 155 1e-36 UniRef50_D2EJX0 Transcriptional regulator n=1 Tax=Pediococcus ac... 155 1e-36 UniRef50_C7MYE5 Transcriptional regulator n=1 Tax=Saccharomonosp... 155 1e-36 UniRef50_C6JLR3 Transcription regulator n=1 Tax=Fusobacterium va... 155 1e-36 UniRef50_C1DL90 Sugar isomerase (SIS) n=48 Tax=Proteobacteria Re... 155 1e-36 UniRef50_D0BLW5 Transcriptional regulator, RpiR family n=3 Tax=G... 155 1e-36 UniRef50_UPI00019039EA RpiR family transcriptional regulator n=2... 155 2e-36 UniRef50_B9Y9Y3 Putative uncharacterized protein n=1 Tax=Holdema... 154 3e-36 UniRef50_Q2SAA1 Transcriptional regulator n=1 Tax=Hahella chejue... 154 3e-36 UniRef50_C3WYI9 Transcription regulator n=6 Tax=Fusobacterium Re... 154 3e-36 UniRef50_B6G7X7 Putative uncharacterized protein n=1 Tax=Collins... 154 3e-36 UniRef50_C5CD76 Transcriptional regulator, RpiR family n=1 Tax=K... 154 3e-36 UniRef50_B4BI96 Transcriptional regulator, RpiR family n=1 Tax=G... 154 3e-36 UniRef50_Q03HE1 Transcriptional regulator n=1 Tax=Pediococcus pe... 154 4e-36 UniRef50_C3RPM1 Predicted protein n=3 Tax=Bacteria RepID=C3RPM1_... 153 4e-36 UniRef50_C3RRE4 Transcriptional regulator n=2 Tax=Bacteria RepID... 153 4e-36 UniRef50_C3RI70 Phosphosugar-binding transcriptional regulator n... 153 5e-36 UniRef50_Q4KEH9 Transcriptional regulator, putative n=8 Tax=Pseu... 153 7e-36 UniRef50_A4EBN8 Putative uncharacterized protein n=1 Tax=Collins... 153 8e-36 UniRef50_Q1GCU6 Transcriptional regulator, RpiR family n=2 Tax=R... 153 8e-36 UniRef50_B6FRS1 Putative uncharacterized protein n=1 Tax=Clostri... 153 8e-36 UniRef50_C8SN57 Transcriptional regulator, RpiR family n=1 Tax=M... 152 9e-36 UniRef50_B6GAY7 Putative uncharacterized protein n=1 Tax=Collins... 152 9e-36 UniRef50_B8DD46 Phosphosugar-binding transcriptional regulator, ... 152 9e-36 UniRef50_A6FUC4 Transcriptional regulator, RpiR family protein n... 152 1e-35 UniRef50_C5RND9 Transcriptional regulator, RpiR family n=1 Tax=C... 152 1e-35 UniRef50_C1I4M4 Predicted protein n=1 Tax=Clostridium sp. 7_2_43... 152 1e-35 UniRef50_Q5LQ93 Transcriptional regulator, RpiR family n=5 Tax=R... 152 1e-35 UniRef50_D0CNW7 Transcriptional regulator, RpiR family n=1 Tax=S... 152 2e-35 UniRef50_C0D8Y2 Putative uncharacterized protein n=1 Tax=Clostri... 152 2e-35 UniRef50_B0NY52 Putative uncharacterized protein n=1 Tax=Clostri... 152 2e-35 UniRef50_Q2J952 Transcriptional regulator, RpiR family n=3 Tax=F... 152 2e-35 UniRef50_Q03HS5 Transcriptional regulator n=2 Tax=Pediococcus Re... 151 3e-35 UniRef50_UPI000196B851 hypothetical protein CATMIT_00169 n=1 Tax... 151 3e-35 UniRef50_D1Y5K3 SIS domain protein n=1 Tax=Pyramidobacter piscol... 151 3e-35 UniRef50_A9H555 Putative uncharacterized protein n=1 Tax=Roseoba... 150 4e-35 UniRef50_C7H192 RpiR familytranscriptional regulator with phosph... 150 5e-35 UniRef50_Q03NG7 Transcriptional regulator n=18 Tax=Bacilli RepID... 150 5e-35 UniRef50_C0VS80 RpiR family transcriptional regulator n=2 Tax=Co... 150 6e-35 UniRef50_A7GA30 Transcriptional regulator, RpiR family n=10 Tax=... 150 6e-35 UniRef50_D1Y461 Transcriptional regulator, RpiR family protein n... 150 7e-35 UniRef50_A6UBD6 Transcriptional regulator, RpiR family n=16 Tax=... 150 7e-35 UniRef50_A3YDZ1 Putative transcriptional regulator n=1 Tax=Marin... 150 7e-35 UniRef50_Q6M5C3 Transcriptional regulator, rpiR family n=3 Tax=C... 150 7e-35 UniRef50_A3TM76 Putative uncharacterized protein n=1 Tax=Janibac... 150 7e-35 UniRef50_B9DLT1 Truncated putative RpiR family transcriptional r... 149 8e-35 UniRef50_C4ZEF4 Glucokinase n=2 Tax=Clostridiales RepID=C4ZEF4_E... 149 9e-35 UniRef50_A6X7I1 Transcriptional regulator, RpiR family n=1 Tax=O... 149 1e-34 UniRef50_C6QNE5 Transcriptional regulator, RpiR family n=1 Tax=G... 149 1e-34 UniRef50_C3RPB8 LacI-family transcriptional regulator n=2 Tax=Ba... 149 1e-34 UniRef50_B8IEA9 Transcriptional regulator, RpiR family n=4 Tax=R... 149 1e-34 UniRef50_C9XQG1 Phosphosugar-binding transcriptional regulator n... 149 1e-34 UniRef50_C2CZ55 RpiR family transcriptional regulator n=3 Tax=La... 149 1e-34 UniRef50_A4EUM4 Putative transcriptional regulator protein n=1 T... 148 1e-34 UniRef50_B0NHF5 Putative uncharacterized protein n=3 Tax=Clostri... 148 2e-34 UniRef50_C2H000 RpiR family transcriptional regulator n=26 Tax=E... 148 2e-34 UniRef50_C0CX07 Putative uncharacterized protein n=1 Tax=Clostri... 148 2e-34 UniRef50_C8NIR7 RpiR family phosphosugar-binding transcriptional... 148 2e-34 UniRef50_A6M2C0 Transcriptional regulator, RpiR family n=50 Tax=... 148 2e-34 UniRef50_A4JTS2 Transcriptional regulator, RpiR family n=1 Tax=B... 148 2e-34 UniRef50_A3JGM7 Putative uncharacterized protein n=2 Tax=Proteob... 148 3e-34 UniRef50_C3RP06 Transcriptional regulator n=2 Tax=Bacteria RepID... 147 3e-34 UniRef50_A8U8R6 Putative uncharacterized protein n=1 Tax=Carnoba... 147 3e-34 UniRef50_C5BWC4 Transcriptional regulator, RpiR family n=1 Tax=B... 147 3e-34 UniRef50_Q6MTZ4 Transcription regulator gntR n=2 Tax=Mycoplasma ... 147 4e-34 UniRef50_B5E566 Transcriptional regulator, RpiR family n=10 Tax=... 147 4e-34 UniRef50_A5I3B9 Phosphosugar-binding transcriptional regulator n... 147 4e-34 UniRef50_Q11LZ5 Transcriptional regulator, RpiR family n=1 Tax=C... 147 4e-34 UniRef50_UPI0001973198 transcriptional regulator, RpiR family pr... 147 4e-34 UniRef50_Q6LK40 Putative transcriptional regulator n=3 Tax=Vibri... 147 5e-34 UniRef50_B4BR41 Transcriptional regulator, RpiR family n=3 Tax=B... 147 5e-34 UniRef50_A9D8B4 Putative uncharacterized protein n=1 Tax=Hoeflea... 147 5e-34 UniRef50_B9JRN1 Transcriptional regulator protein n=2 Tax=Agroba... 147 5e-34 UniRef50_A7G380 Transcriptional regulator, RpiR family n=1 Tax=C... 147 6e-34 UniRef50_C6VJY7 Transcription regulator n=3 Tax=Lactobacillus pl... 147 6e-34 UniRef50_D1B967 Transcriptional regulator, RpiR family n=2 Tax=S... 147 6e-34 UniRef50_C2HQZ9 Transcriptional regulator n=2 Tax=Lactobacillus ... 147 6e-34 UniRef50_A6M2I0 Transcriptional regulator, RpiR family n=3 Tax=C... 146 7e-34 UniRef50_A4AG13 Putative uncharacterized protein n=1 Tax=marine ... 146 7e-34 UniRef50_Q46SK2 Transcriptional regulator, RpiR family n=1 Tax=R... 146 7e-34 UniRef50_C3RJI4 Transcriptional regulator n=2 Tax=Bacteria RepID... 146 7e-34 UniRef50_B7QPC3 Transcriptional regulator, RpiR family n=4 Tax=R... 146 7e-34 UniRef50_A8RA11 Putative uncharacterized protein n=1 Tax=Eubacte... 146 8e-34 UniRef50_A1WR14 Transcriptional regulator, RpiR family n=25 Tax=... 146 8e-34 UniRef50_C2BN80 RpiR family transcriptional regulator n=1 Tax=Co... 146 8e-34 UniRef50_A6LZ63 Transcriptional regulator, RpiR family n=1 Tax=C... 146 9e-34 UniRef50_Q16A62 Transcriptional regulator, RpiR family, putative... 146 9e-34 UniRef50_B8H4I3 Transcriptional regulator IolR n=2 Tax=Caulobact... 146 1e-33 UniRef50_B9K550 Transcriptional regulator n=1 Tax=Agrobacterium ... 146 1e-33 UniRef50_D1P280 Transcriptional regulator n=5 Tax=Enterobacteria... 146 1e-33 UniRef50_Q5WBH0 RpiR family transcriptional regulator n=1 Tax=Ba... 146 1e-33 UniRef50_B5I710 Transcriptional regulator n=6 Tax=Streptomyces R... 145 1e-33 UniRef50_A1B8L9 Transcriptional regulator, RpiR family n=3 Tax=A... 145 1e-33 UniRef50_C9M9F8 Transcriptional regulator, RpiR family n=1 Tax=J... 145 1e-33 UniRef50_C5EFX0 N-acetylmannosamine kinase n=1 Tax=Clostridiales... 145 2e-33 UniRef50_C9NY46 Predicted transcriptional regulator of the myo-i... 145 2e-33 UniRef50_P54717 HTH-type transcriptional regulator glvR n=4 Tax=... 145 2e-33 UniRef50_B6QWT3 Putative transcriptional regulator protein n=1 T... 145 2e-33 UniRef50_C6VQQ2 Transcription regulator n=4 Tax=Firmicutes RepID... 145 2e-33 UniRef50_B1QZ16 Transcriptional regulator, RpiR family n=2 Tax=C... 145 2e-33 UniRef50_B6R4H6 Transcriptional regulator, RpiR family n=1 Tax=P... 145 2e-33 UniRef50_A9BRR5 Transcriptional regulator, RpiR family n=2 Tax=c... 145 2e-33 UniRef50_A6WWJ9 Transcriptional regulator, RpiR family n=1 Tax=O... 145 2e-33 UniRef50_B9QTZ2 SIS domain protein n=2 Tax=Labrenzia RepID=B9QTZ... 144 3e-33 UniRef50_B9R3N6 SIS domain protein n=3 Tax=Alphaproteobacteria R... 144 3e-33 UniRef50_D2NRV5 Transcriptional regulator n=2 Tax=Rothia mucilag... 144 3e-33 UniRef50_C5SGA6 Transcriptional regulator, RpiR family n=1 Tax=A... 144 3e-33 UniRef50_Q5WD27 Transcriptional regulator n=8 Tax=Bacilli RepID=... 144 3e-33 UniRef50_C5F607 Predicted protein n=1 Tax=Lactobacillus paracase... 144 4e-33 UniRef50_A3V1X8 Transcriptional regulator, RpiR family n=1 Tax=L... 143 5e-33 UniRef50_A6P0T4 Putative uncharacterized protein n=1 Tax=Bactero... 143 5e-33 UniRef50_A7FLM3 Transcriptional regulator, RpiR family n=47 Tax=... 143 5e-33 UniRef50_C3RQD3 Predicted protein n=1 Tax=Mollicutes bacterium D... 143 5e-33 UniRef50_A6M2I1 Transcriptional regulator, RpiR family n=3 Tax=C... 143 5e-33 UniRef50_UPI0001C316A3 transcriptional regulator, RpiR family n=... 143 6e-33 UniRef50_UPI0001BC4077 transcriptional regulator n=1 Tax=Fusobac... 143 7e-33 UniRef50_B2SAV7 SIS domain protein n=40 Tax=Alphaproteobacteria ... 143 7e-33 UniRef50_B0N0Q7 Putative uncharacterized protein n=1 Tax=Clostri... 143 7e-33 UniRef50_UPI000196BB09 hypothetical protein CATMIT_01392 n=1 Tax... 143 8e-33 UniRef50_Q723C8 Phosphosugar-binding transcriptional regulator, ... 143 8e-33 UniRef50_A6M092 Transcriptional regulator, RpiR family n=1 Tax=C... 143 9e-33 UniRef50_Q11C05 Transcriptional regulator, RpiR family n=1 Tax=C... 142 1e-32 UniRef50_A6BJ02 Putative uncharacterized protein n=3 Tax=Clostri... 142 1e-32 UniRef50_B3WB04 RpiR-like protein n=8 Tax=Lactobacillus RepID=B3... 142 1e-32 UniRef50_C2EL56 RpiR family transcriptional regulator n=4 Tax=La... 142 1e-32 UniRef50_Q09KH2 FitR n=27 Tax=Proteobacteria RepID=Q09KH2_ECOLX 142 1e-32 UniRef50_D2BNU3 Transcriptional regulator, RpiR family n=4 Tax=L... 142 1e-32 UniRef50_C6DBI2 Transcriptional regulator, RpiR family n=9 Tax=E... 142 2e-32 UniRef50_D2EIN0 Putative uncharacterized protein n=1 Tax=Pedioco... 141 2e-32 UniRef50_C7HWU0 Putative uncharacterized protein n=1 Tax=Anaeroc... 141 2e-32 UniRef50_B5H8Z9 Transcriptional regulator n=3 Tax=Streptomyces R... 141 2e-32 UniRef50_UPI000196AB43 hypothetical protein CATMIT_01461 n=1 Tax... 141 3e-32 UniRef50_A8S164 Putative uncharacterized protein n=1 Tax=Clostri... 141 3e-32 UniRef50_B5J441 SIS domain protein n=1 Tax=Octadecabacter antarc... 141 3e-32 UniRef50_A5IZ72 Transcriptional regulator n=1 Tax=Mycoplasma aga... 141 3e-32 UniRef50_C2JTN9 Transcriptional regulator n=3 Tax=Lactobacillus ... 140 4e-32 UniRef50_Q2KXW9 Putative transcriptional regulator n=1 Tax=Borde... 140 4e-32 UniRef50_B2V3J3 Transcriptional regulator, RpiR family n=2 Tax=C... 140 5e-32 UniRef50_Q38ZK5 Putative transcriptional regulator, RpiR family ... 140 5e-32 UniRef50_UPI000196B86F hypothetical protein CATMIT_00765 n=1 Tax... 140 5e-32 UniRef50_B5RKH7 Transcriptional regulator, RpiR family n=2 Tax=P... 140 5e-32 UniRef50_C6L8R9 Putative phosphosugar-binding transcriptional re... 140 5e-32 UniRef50_C9KM39 Transcriptional regulator GlvR n=2 Tax=Veillonel... 140 5e-32 UniRef50_C3RNE4 Transcriptional regulator n=3 Tax=Bacteria RepID... 140 6e-32 UniRef50_A8S127 Putative uncharacterized protein n=1 Tax=Clostri... 140 6e-32 UniRef50_D0CS12 Transcriptional regulator, RpiR family n=1 Tax=S... 140 6e-32 UniRef50_C3RJ39 Transcriptional regulator n=2 Tax=Bacteria RepID... 139 8e-32 UniRef50_C3RHW9 Phosphosugar-binding transcriptional regulator n... 139 8e-32 UniRef50_A6DXB0 SIS domain protein n=1 Tax=Roseovarius sp. TM103... 139 8e-32 UniRef50_C3RLZ3 Transcriptional regulator n=3 Tax=Bacteria RepID... 139 9e-32 UniRef50_Q13RF5 Transcriptional regulator, RpiR family n=3 Tax=P... 139 9e-32 UniRef50_Q0C066 SIS domain protein n=1 Tax=Hyphomonas neptunium ... 139 1e-31 UniRef50_C0FQ68 Putative uncharacterized protein n=1 Tax=Rosebur... 139 1e-31 UniRef50_C5EHV8 RpiR-family transcriptional regulator n=1 Tax=Cl... 139 1e-31 UniRef50_Q02WG9 Transcriptional regulator n=6 Tax=Lactococcus Re... 139 1e-31 UniRef50_B9DVI9 RpiR family regulatory protein n=1 Tax=Streptoco... 139 1e-31 UniRef50_A8GCW7 Transcriptional regulator, RpiR family n=1 Tax=S... 139 1e-31 UniRef50_C5EIL0 RpiR-family transcriptional regulator n=3 Tax=Cl... 139 1e-31 UniRef50_A6LRA2 Transcriptional regulator, RpiR family n=3 Tax=C... 138 1e-31 UniRef50_C5EIL1 RpiR-family transcriptional regulator n=2 Tax=Cl... 138 1e-31 UniRef50_C6VKP3 Transcription regulator n=3 Tax=Lactobacillus pl... 138 2e-31 UniRef50_D1AK32 Transcriptional regulator, RpiR family n=1 Tax=S... 138 2e-31 UniRef50_B2TLN0 Phosphosugar-binding protein n=1 Tax=Clostridium... 138 2e-31 UniRef50_D2EJM8 Phosphosugar-binding transcriptional regulator n... 138 2e-31 UniRef50_C0CQ65 Putative uncharacterized protein n=1 Tax=Blautia... 138 2e-31 UniRef50_D0Z271 Transcriptional regulator n=6 Tax=Vibrionaceae R... 138 3e-31 UniRef50_Q1ZB96 Transcriptional regulator n=1 Tax=Photobacterium... 138 3e-31 UniRef50_Q04H60 Transcriptional regulator n=2 Tax=Oenococcus oen... 138 3e-31 UniRef50_D0J1V5 Transcriptional regulator, RpiR family n=2 Tax=C... 138 3e-31 UniRef50_A3VFQ4 Putative transcriptional regulator protein n=1 T... 138 3e-31 UniRef50_A9IJZ1 Putative regulator (SIS family) n=4 Tax=Bordetel... 137 4e-31 UniRef50_B5ZFL0 Transcriptional regulator, RpiR family n=2 Tax=G... 137 4e-31 UniRef50_A6UKE0 Transcriptional regulator, RpiR family n=4 Tax=A... 137 4e-31 UniRef50_A1WL40 Transcriptional regulator, RpiR family n=1 Tax=V... 137 5e-31 UniRef50_B0NY53 Putative uncharacterized protein n=1 Tax=Clostri... 137 5e-31 UniRef50_A5IVA6 Transcriptional regulator n=63 Tax=Staphylococcu... 137 5e-31 UniRef50_Q98AI2 Mlr5989 protein n=1 Tax=Mesorhizobium loti RepID... 137 6e-31 UniRef50_UPI00016A9B9D transcriptional regulator, RpiR family pr... 137 6e-31 UniRef50_B5XW96 SIS domain protein n=11 Tax=Enterobacteriaceae R... 137 6e-31 UniRef50_B1HYT1 Transcriptional regulator n=2 Tax=Bacillaceae Re... 136 7e-31 UniRef50_C5EP41 RpiR family transcriptional regulator n=1 Tax=Cl... 136 7e-31 UniRef50_Q5WG85 Transcriptional regulator n=3 Tax=Bacteria RepID... 136 7e-31 UniRef50_UPI0001909264 RpiR family transcriptional regulator n=1... 135 1e-30 UniRef50_C2HBU5 RpiR family transcriptional regulator n=3 Tax=En... 135 1e-30 UniRef50_UPI000196AB39 hypothetical protein CATMIT_01159 n=1 Tax... 135 1e-30 UniRef50_A1BB42 Transcriptional regulator, RpiR family n=1 Tax=P... 135 1e-30 UniRef50_Q1IJW8 Transcriptional regulator, RpiR family n=1 Tax=C... 135 1e-30 UniRef50_B0G8I7 Putative uncharacterized protein n=1 Tax=Dorea f... 135 2e-30 UniRef50_Q13FP6 Transcriptional regulator, RpiR family n=3 Tax=P... 135 2e-30 UniRef50_A9WLS8 Transcriptional regulator, RpiR family n=1 Tax=R... 135 2e-30 UniRef50_A5G0Y8 Transcriptional regulator, RpiR family n=7 Tax=P... 135 2e-30 UniRef50_C8WCY0 Transcriptional regulator, RpiR family n=3 Tax=Z... 135 2e-30 UniRef50_C3RLZ2 Transcriptional regulator n=3 Tax=Bacteria RepID... 135 2e-30 UniRef50_A3K8P8 Sugar isomerase (SIS) n=2 Tax=Rhodobacteraceae R... 135 2e-30 UniRef50_A8TQ66 Transcriptional regulator n=1 Tax=alpha proteoba... 135 2e-30 UniRef50_C5B7U9 Transcriptional regulator, RpiR family protein n... 134 3e-30 UniRef50_C4XE43 Putative uncharacterized protein n=1 Tax=Mycopla... 134 3e-30 UniRef50_A6LTH7 Transcriptional regulator, RpiR family n=1 Tax=C... 134 3e-30 UniRef50_C7M1X3 Transcriptional regulator, RpiR family n=1 Tax=A... 134 3e-30 UniRef50_C1YQ52 Transcriptional regulator n=1 Tax=Nocardiopsis d... 134 3e-30 UniRef50_A9BSK7 Transcriptional regulator, RpiR family n=4 Tax=B... 134 3e-30 UniRef50_B2V3J2 Transcriptional regulator, RpiR family n=2 Tax=C... 134 4e-30 UniRef50_B9DUC4 RpiR-family regulatory protein n=1 Tax=Streptoco... 133 4e-30 UniRef50_A6WYS0 Transcriptional regulator, RpiR family n=4 Tax=R... 133 4e-30 UniRef50_A5TS02 RpiR family transcriptional regulator n=3 Tax=Fu... 133 5e-30 UniRef50_B6GCS3 Putative uncharacterized protein n=1 Tax=Collins... 133 6e-30 UniRef50_B9J832 Transcriptional regulator protein n=1 Tax=Agroba... 133 6e-30 UniRef50_C9AB15 Phosphosugar isomerase transcriptional regulator... 133 7e-30 UniRef50_C9M9T3 Putative SIS domain protein n=1 Tax=Jonquetella ... 133 7e-30 UniRef50_Q98JM0 Mlr1883 protein n=2 Tax=Mesorhizobium RepID=Q98J... 133 8e-30 UniRef50_C6BI14 Transcriptional regulator, RpiR family n=6 Tax=R... 133 9e-30 UniRef50_C3RJQ3 Predicted protein n=2 Tax=Bacteria RepID=C3RJQ3_... 133 9e-30 UniRef50_A8AMT2 Putative uncharacterized protein n=3 Tax=Enterob... 132 1e-29 UniRef50_C2CHV1 RpiR family transcriptional regulator n=1 Tax=An... 132 1e-29 UniRef50_Q1IJ92 Transcriptional regulator, RpiR family n=1 Tax=C... 132 1e-29 UniRef50_D1AJC9 Transcriptional regulator, RpiR family n=4 Tax=B... 132 1e-29 UniRef50_C5NW06 Transcriptional regulator, RpiR family n=2 Tax=F... 132 1e-29 UniRef50_Q1AYI2 Transcriptional regulator, RpiR family n=17 Tax=... 132 1e-29 UniRef50_Q4A725 Transcriptional regulator n=1 Tax=Mycoplasma syn... 132 1e-29 UniRef50_A4JPM3 Transcriptional regulator, RpiR family n=11 Tax=... 132 1e-29 UniRef50_Q6A765 Transcriptional regulator, RpiR family n=3 Tax=P... 132 1e-29 UniRef50_B0MFI6 Putative uncharacterized protein n=2 Tax=Anaeros... 132 2e-29 UniRef50_C9A974 Transcription regulator n=4 Tax=Enterococcus Rep... 132 2e-29 UniRef50_C1IAA4 Transcriptional regulator n=1 Tax=Clostridium sp... 132 2e-29 UniRef50_A1VUM9 Transcriptional regulator, RpiR family n=4 Tax=C... 132 2e-29 UniRef50_Q2BDH7 RpiR-family transcriptional regulator n=1 Tax=Ba... 132 2e-29 UniRef50_B0NEG5 Putative uncharacterized protein n=1 Tax=Clostri... 132 2e-29 UniRef50_C4V4P0 RpiR family transcriptional regulator n=1 Tax=Se... 132 2e-29 UniRef50_C9A4Z8 Transcription regulator n=4 Tax=Enterococcus Rep... 132 2e-29 UniRef50_C6CS19 Transcriptional regulator, RpiR family n=1 Tax=P... 131 2e-29 UniRef50_C9XQF1 Phosphosugar-binding transcriptional regulator n... 131 2e-29 UniRef50_A5EGL2 Transcriptional regulator, RpiR family n=1 Tax=B... 131 2e-29 UniRef50_UPI0001C31BBF transcriptional regulator, RpiR family n=... 131 3e-29 UniRef50_C3RLW4 Predicted protein n=3 Tax=Bacteria RepID=C3RLW4_... 131 3e-29 UniRef50_Q184P9 Phosphosugar-binding transcriptional regulator n... 131 3e-29 UniRef50_D2TS37 Putative DNA binding protein n=1 Tax=Citrobacter... 131 3e-29 UniRef50_C2ECD8 Transcriptional regulator n=1 Tax=Lactobacillus ... 131 4e-29 UniRef50_C7QJ71 Transcriptional regulator, RpiR family n=5 Tax=A... 130 4e-29 UniRef50_Q14LR0 Hypothetical transcriptional regulator with heli... 130 4e-29 UniRef50_C3W9G1 Predicted protein n=3 Tax=Fusobacterium RepID=C3... 130 4e-29 UniRef50_B1IEE2 Transcriptional regulator, RpiR family n=11 Tax=... 130 5e-29 UniRef50_Q1YL64 Possible transcriptional regulator n=1 Tax=Auran... 130 5e-29 UniRef50_C2GZH1 RpiR family transcriptional regulator n=17 Tax=E... 130 5e-29 UniRef50_C7LIK3 Transcriptional regulator, RpiR family n=39 Tax=... 130 6e-29 UniRef50_A3SJ61 SIS domain protein n=1 Tax=Roseovarius nubinhibe... 130 6e-29 UniRef50_C4XF00 Putative uncharacterized protein n=1 Tax=Mycopla... 130 7e-29 UniRef50_B9KVH6 Transcriptional regulator, RpiR family n=2 Tax=R... 130 7e-29 UniRef50_Q1GL90 Transcriptional regulator, RpiR family n=9 Tax=R... 129 9e-29 UniRef50_UPI0001AF5353 RpiR family transcriptional regulator n=1... 129 1e-28 UniRef50_D1PQY5 RpiR-family transcriptional regulator n=1 Tax=Su... 128 1e-28 UniRef50_Q8EMY0 Putative uncharacterized protein OB2710 n=1 Tax=... 128 2e-28 UniRef50_C5F7B7 Phosphosugar-binding transcriptional regulator n... 128 2e-28 UniRef50_A1FB39 Transcriptional regulator (Fragment) n=1 Tax=Vib... 128 3e-28 UniRef50_C4L7E2 Transcriptional regulator, RpiR family n=1 Tax=T... 128 3e-28 UniRef50_C1YLY0 Transcriptional regulator n=1 Tax=Nocardiopsis d... 127 4e-28 UniRef50_C9Q7M3 Transcriptional regulator n=2 Tax=Vibrio RepID=C... 127 4e-28 UniRef50_C5EFT9 HTH-type transcriptional regulator glvR n=1 Tax=... 127 4e-28 UniRef50_Q046R3 Transcriptional regulator n=7 Tax=Lactobacillus ... 127 4e-28 UniRef50_Q88GX5 Transcriptional regulator, RpiR family n=7 Tax=P... 126 7e-28 UniRef50_A0QRN2 Transcriptional regulator n=1 Tax=Mycobacterium ... 126 7e-28 UniRef50_A6X385 Transcriptional regulator, RpiR family n=2 Tax=O... 126 7e-28 UniRef50_C8SNA8 Transcriptional regulator, RpiR family n=2 Tax=M... 126 8e-28 UniRef50_UPI0001788C32 transcriptional regulator, RpiR family n=... 126 8e-28 UniRef50_C7T7R2 Transcriptional regulator, RpiR family n=7 Tax=L... 126 9e-28 UniRef50_C1D3U9 Putative transcriptional regulator, RpiR family ... 126 9e-28 UniRef50_Q97LM6 Transcriptional regulator, RpiR family n=6 Tax=C... 126 9e-28 UniRef50_C2BXZ0 RpiR family transcriptional regulator n=4 Tax=Ba... 126 1e-27 UniRef50_C9A749 Putative uncharacterized protein n=1 Tax=Enteroc... 126 1e-27 UniRef50_C6ATF5 Transcriptional regulator, RpiR family n=17 Tax=... 126 1e-27 UniRef50_D1AGI8 Transcriptional regulator, RpiR family n=1 Tax=S... 126 1e-27 UniRef50_C1YMF9 Transcriptional regulator n=1 Tax=Nocardiopsis d... 126 1e-27 UniRef50_C3RP07 Transcriptional regulator n=2 Tax=Bacteria RepID... 126 1e-27 UniRef50_Q1GH80 Transcriptional regulator, RpiR family n=6 Tax=R... 126 1e-27 UniRef50_C7RG92 Transcriptional regulator, RpiR family n=2 Tax=A... 125 1e-27 UniRef50_A9WNR4 Transcriptional regulator, RpiR family n=1 Tax=R... 125 1e-27 UniRef50_D2BPU5 Transcriptional regulator, RpiR family n=4 Tax=L... 125 1e-27 UniRef50_A2RL75 Putative HTH-type transcriptional regulator n=1 ... 125 1e-27 UniRef50_Q930C4 Transcriptional regulator, RpiR family n=1 Tax=S... 125 2e-27 UniRef50_Q7D403 Transcriptional regulator, RpiR family n=2 Tax=A... 125 2e-27 UniRef50_C9XKC4 RpiR-family transcriptional regulator n=3 Tax=Cl... 125 2e-27 UniRef50_A0K0I4 Transcriptional regulator, RpiR family n=1 Tax=A... 125 2e-27 UniRef50_A6VSF8 Transcriptional regulator, RpiR family n=4 Tax=G... 125 2e-27 UniRef50_C2HLE6 Transcriptional regulator n=8 Tax=Lactobacillus ... 125 2e-27 UniRef50_A6W9S6 Transcriptional regulator, RpiR family n=1 Tax=K... 124 3e-27 UniRef50_A8FAT4 Transcriptional regulator n=2 Tax=Bacillus RepID... 124 3e-27 UniRef50_C1I6H5 Predicted protein n=1 Tax=Clostridium sp. 7_2_43... 124 3e-27 UniRef50_A9DTL4 Transcriptional regulator, RpiR family protein n... 124 3e-27 UniRef50_A0K0Z5 Transcriptional regulator, RpiR family n=3 Tax=M... 124 4e-27 UniRef50_A6X2Q6 Transcriptional regulator, RpiR family n=1 Tax=O... 123 5e-27 UniRef50_B7QTT1 Transcriptional regulator, rpir family n=2 Tax=R... 123 5e-27 UniRef50_D1ARL0 Transcriptional regulator, RpiR family n=1 Tax=S... 123 6e-27 UniRef50_C3RH58 Predicted protein n=2 Tax=Bacteria RepID=C3RH58_... 123 7e-27 UniRef50_O67500 Uncharacterized phosphosugar isomerase aq_1546 n... 123 9e-27 UniRef50_C9A1P4 Transcriptional regulator n=1 Tax=Enterococcus g... 123 9e-27 UniRef50_C5D0V0 Transcriptional regulator, RpiR family n=1 Tax=V... 122 1e-26 UniRef50_B1R0N4 SIS domain protein n=2 Tax=Clostridium butyricum... 122 1e-26 UniRef50_C9LT74 Arabinose 5-phosphate isomerase n=2 Tax=Bacteria... 122 1e-26 UniRef50_A5LQQ9 Phosphosugar-binding transcriptional regulator, ... 122 1e-26 UniRef50_C2HN51 Transcriptional regulator n=7 Tax=Lactobacillus ... 121 2e-26 UniRef50_A4FJ87 Transcriptional regulator, RpiR family n=1 Tax=S... 121 2e-26 UniRef50_A5V7B7 Transcriptional regulator, RpiR family n=1 Tax=S... 121 2e-26 UniRef50_C8S1A0 Transcriptional regulator, RpiR family n=1 Tax=R... 121 2e-26 UniRef50_Q1QYR8 Transcriptional regulator, RpiR family n=1 Tax=C... 121 2e-26 UniRef50_UPI00016C007A transcriptional regulator, RpiR family pr... 121 3e-26 UniRef50_D2BP23 Transcriptional regulator, RpiR family n=3 Tax=L... 120 4e-26 UniRef50_UPI000196AB3E hypothetical protein CATMIT_01164 n=1 Tax... 120 4e-26 UniRef50_C5J6W4 Transcriptional regulator n=1 Tax=Mycoplasma con... 120 4e-26 UniRef50_C7RFE2 Transcriptional regulator, RpiR family n=1 Tax=A... 120 4e-26 UniRef50_C9XKC3 RpiR-family transcriptional regulator n=4 Tax=Cl... 120 5e-26 UniRef50_A1A2Z7 Putative RpiR-family transcriptional regulatory ... 120 5e-26 UniRef50_UPI000196AA29 hypothetical protein CATMIT_01879 n=1 Tax... 120 7e-26 UniRef50_C7TGE4 Transcriptional regulator, RpiR family n=4 Tax=L... 120 7e-26 UniRef50_C6JMB7 Polysialic acid capsule expression protein kpsF ... 120 8e-26 UniRef50_D2BNU6 Transcriptional regulator, RpiR family n=4 Tax=L... 120 8e-26 UniRef50_Q4A886 Transcriptional regulator n=5 Tax=Mycoplasma hyo... 120 8e-26 UniRef50_Q0C3E7 Sugar isomerase, KpsF/GutQ family n=2 Tax=Alphap... 119 9e-26 UniRef50_C9A505 Transcriptional regulator n=4 Tax=Enterococcus R... 119 9e-26 UniRef50_Q03C42 Transcriptional regulator n=1 Tax=Lactobacillus ... 119 1e-25 UniRef50_A8LRZ7 Transcriptional regulator n=2 Tax=Rhodobacterale... 119 1e-25 UniRef50_A9EFQ3 SIS domain protein n=2 Tax=Rhodobacteraceae RepI... 119 1e-25 UniRef50_A8U5R1 RpiR-family transcriptional regulator n=2 Tax=Ba... 119 1e-25 UniRef50_Q15U63 Transcriptional regulator, RpiR family n=1 Tax=P... 119 1e-25 UniRef50_C9N979 Transcriptional regulator, RpiR family n=2 Tax=S... 118 2e-25 UniRef50_B4RJ65 KpsF n=58 Tax=Bacteria RepID=B4RJ65_NEIG2 118 2e-25 UniRef50_C8P353 Putative uncharacterized protein n=1 Tax=Erysipe... 118 2e-25 UniRef50_Q0FJM2 Putative uncharacterized protein n=1 Tax=Roseova... 118 2e-25 UniRef50_UPI000196ADBA hypothetical protein CATMIT_01190 n=1 Tax... 118 2e-25 UniRef50_Q03HM4 Transcriptional regulator n=1 Tax=Pediococcus pe... 118 2e-25 UniRef50_Q0FH55 Sugar isomerase (SIS) n=2 Tax=Rhodobacteraceae R... 118 3e-25 UniRef50_B1IED4 SIS domain protein n=10 Tax=Clostridium RepID=B1... 118 3e-25 UniRef50_A8IDV1 Transcriptional regulator n=1 Tax=Azorhizobium c... 118 3e-25 UniRef50_C9A748 Transcriptional regulator n=1 Tax=Enterococcus c... 118 3e-25 UniRef50_UPI000050FE27 transcriptional regulator, RpiR family pr... 118 3e-25 UniRef50_Q1LZ65 RpiR-like protein n=27 Tax=Lactobacillales RepID... 117 4e-25 UniRef50_A1WQC0 Transcriptional regulator, RpiR family n=1 Tax=V... 117 4e-25 UniRef50_D1U3G0 KpsF/GutQ family protein n=1 Tax=Desulfovibrio a... 117 4e-25 UniRef50_C1TKE5 KpsF/GutQ family protein n=1 Tax=Dethiosulfovibr... 117 4e-25 UniRef50_Q47334 Polysialic acid capsule expression protein kpsF ... 117 5e-25 UniRef50_C7LLS0 Transcriptional regulator, RpiR family protein n... 117 5e-25 UniRef50_A6TPC3 Transcriptional regulator, RpiR family n=1 Tax=A... 116 6e-25 UniRef50_C1IAG1 Predicted protein n=1 Tax=Clostridium sp. 7_2_43... 116 8e-25 UniRef50_B6GDB9 Putative uncharacterized protein n=1 Tax=Collins... 116 8e-25 UniRef50_Q1QYQ3 Transcriptional regulator, RpiR family n=1 Tax=C... 116 9e-25 UniRef50_C2EN35 RpiR family transcriptional regulator n=1 Tax=La... 116 9e-25 UniRef50_A3PQG1 Transcriptional regulator, RpiR family n=6 Tax=R... 115 1e-24 UniRef50_A0P1C3 SIS domain protein n=2 Tax=Rhodobacteraceae RepI... 115 1e-24 UniRef50_Q7MJB4 Transcriptional regulator n=3 Tax=Vibrio RepID=Q... 115 1e-24 UniRef50_C3RJ80 Predicted protein n=3 Tax=Bacteria RepID=C3RJ80_... 115 1e-24 UniRef50_C2DZ33 Transcriptional regulator n=9 Tax=Lactobacillus ... 115 1e-24 UniRef50_C4ICI5 Transcriptional regulator, RpiR family n=2 Tax=C... 115 1e-24 UniRef50_Q2ST84 Phosphosugar-binding transcriptional regulator, ... 115 1e-24 UniRef50_Q6F0H6 Putative transcriptional regulator n=1 Tax=Mesop... 115 2e-24 UniRef50_A4X3Y2 Helix-turn-helix protein RpiR n=3 Tax=Actinomyce... 115 2e-24 UniRef50_B8DD88 Phosphosugar-binding protein n=16 Tax=Listeria m... 114 3e-24 UniRef50_C0X7I6 Phosphosugar-binding transcriptional regulator n... 114 3e-24 UniRef50_C6VU42 KpsF/GutQ family protein n=3 Tax=Sphingobacteria... 114 3e-24 UniRef50_C6DIN8 KpsF/GutQ family protein n=10 Tax=Enterobacteria... 114 4e-24 UniRef50_Q89R61 Bll2911 protein n=1 Tax=Bradyrhizobium japonicum... 114 4e-24 UniRef50_C4FYW5 Putative uncharacterized protein n=2 Tax=Abiotro... 114 4e-24 UniRef50_Q5JH71 Glucosamine--fructose-6-phosphate aminotransfera... 114 4e-24 UniRef50_C1A8V3 Arabinose 5-phosphate isomerase n=1 Tax=Gemmatim... 114 5e-24 UniRef50_Q8D1Q8 Arabinose 5-phosphate isomerase n=525 Tax=cellul... 113 5e-24 UniRef50_B3E057 Arabinose 5-phosphate isomerase and CBS domains ... 113 5e-24 UniRef50_B9CKY1 Transcriptional regulator, RpiR family protein n... 113 5e-24 UniRef50_B6ARK4 Sugar isomerase, KpsF/GutQ family n=3 Tax=Bacter... 113 5e-24 UniRef50_UPI000196CB04 hypothetical protein CATMIT_02765 n=1 Tax... 113 5e-24 UniRef50_A6M3E6 Transcriptional regulator, RpiR family n=1 Tax=C... 113 7e-24 UniRef50_C8PCG0 Transcriptional regulator n=2 Tax=Lactobacillus ... 113 7e-24 UniRef50_D1B671 KpsF/GutQ family protein n=2 Tax=Synergistaceae ... 113 7e-24 UniRef50_B0SHW1 Sugar phosphate isomerase n=6 Tax=Leptospira Rep... 113 7e-24 UniRef50_B2JHA3 Transcriptional regulator, RpiR family n=5 Tax=B... 113 8e-24 UniRef50_Q3ATD5 KpsF/GutQ n=10 Tax=Chlorobiaceae RepID=Q3ATD5_CHLCH 113 8e-24 UniRef50_Q12C10 Transcriptional regulator, RpiR family n=2 Tax=C... 113 8e-24 UniRef50_A3PT11 Transcriptional regulator, RpiR family n=4 Tax=M... 112 1e-23 UniRef50_UPI000196AA26 hypothetical protein CATMIT_01876 n=1 Tax... 112 1e-23 UniRef50_D1S1T7 Transcriptional regulator, RpiR family n=3 Tax=A... 112 1e-23 UniRef50_D1TFW4 Putative transcriptional regulator, RpiR family ... 112 1e-23 UniRef50_Q10ZT6 KpsF/GutQ family protein n=1 Tax=Trichodesmium e... 112 1e-23 UniRef50_B8CZC0 KpsF/GutQ family protein n=4 Tax=Bacteria RepID=... 112 1e-23 UniRef50_A3VSH4 Arabinose 5-phosphate isomerase n=1 Tax=Parvular... 112 1e-23 UniRef50_A4NYS2 N-acetylneuraminate lyase n=2 Tax=Haemophilus in... 112 2e-23 UniRef50_A0B0Z7 Transcriptional regulator, RpiR family n=68 Tax=... 111 2e-23 UniRef50_A3K9H4 Putative uncharacterized protein n=1 Tax=Sagittu... 111 2e-23 UniRef50_A4GJ53 Putative KpsF/GutQ n=1 Tax=uncultured marine Nit... 111 2e-23 UniRef50_A8GDB9 Transcriptional regulator, RpiR family n=1 Tax=S... 111 3e-23 UniRef50_Q8EWN1 Transcriptional regulator n=1 Tax=Mycoplasma pen... 111 3e-23 UniRef50_B9KF21 Arabinose-5-phosphate isomerase n=29 Tax=Bacteri... 111 3e-23 UniRef50_A4VW77 Transcriptional regulator n=1 Tax=Streptococcus ... 111 4e-23 UniRef50_C6I0S8 Sugar isomerase, KpsF/GutQ family protein n=1 Ta... 111 4e-23 UniRef50_B0BZZ6 Sugar isomerase, KpsF/GutQ family n=1 Tax=Acaryo... 110 5e-23 UniRef50_Q2RYH6 KpsF/GutQ n=64 Tax=Proteobacteria RepID=Q2RYH6_R... 110 6e-23 UniRef50_D0LJS5 KpsF/GutQ family protein n=1 Tax=Haliangium ochr... 110 7e-23 UniRef50_Q3JP70 Arabinose-5-phosphate isomerase n=5 Tax=Proteoba... 109 9e-23 UniRef50_Q6AQ42 Related to polysialic acid capsule expression pr... 109 9e-23 UniRef50_C2FAJ3 RpiR family transcriptional regulator n=1 Tax=La... 109 9e-23 UniRef50_C4XDS0 Putative uncharacterized protein n=1 Tax=Mycopla... 109 1e-22 UniRef50_C2BS39 Glutamine--fructose-6-phosphate transaminase, is... 109 1e-22 UniRef50_A6NTR6 Putative uncharacterized protein n=2 Tax=Bacteri... 109 1e-22 UniRef50_A0LE58 KpsF/GutQ family protein n=8 Tax=Bacteria RepID=... 109 1e-22 UniRef50_Q14NM0 Hypothetical transmembrane protein n=1 Tax=Spiro... 109 1e-22 UniRef50_A1VGM9 KpsF/GutQ family protein n=1 Tax=Desulfovibrio v... 109 1e-22 UniRef50_Q041A4 Transcriptional regulator n=8 Tax=Lactobacillus ... 109 1e-22 UniRef50_Q6MPN9 Polysialic acid capsule expression protein n=1 T... 109 1e-22 UniRef50_B6G7Y4 Putative uncharacterized protein n=1 Tax=Collins... 108 1e-22 UniRef50_C6AWU1 Transcriptional regulator, RpiR family n=11 Tax=... 108 2e-22 UniRef50_P45313 Probable phosphosugar isomerase HI1678 n=43 Tax=... 108 2e-22 UniRef50_Q6XYV4 Transcriptional regulator n=2 Tax=Spiroplasma Re... 108 2e-22 UniRef50_A1RA62 Putative SIS (Sugar ISomerase) domain protein n=... 108 3e-22 UniRef50_B0VH11 Carbohydrate isomerase, KpsF/GutQ family n=1 Tax... 108 3e-22 UniRef50_D2R6F2 KpsF/GutQ family protein n=1 Tax=Pirellula stale... 108 3e-22 UniRef50_B2KC19 KpsF/GutQ family protein n=1 Tax=Elusimicrobium ... 108 3e-22 UniRef50_B6IXW6 Sugar isomerase, KpsF n=1 Tax=Rhodospirillum cen... 107 4e-22 UniRef50_Q2GAE9 KpsF/GutQ family protein n=1 Tax=Novosphingobium... 107 4e-22 UniRef50_A5VEU9 KpsF/GutQ family protein n=2 Tax=Sphingomonas wi... 107 4e-22 UniRef50_B0N1U0 Putative uncharacterized protein n=3 Tax=Bacteri... 107 4e-22 UniRef50_C7TGG9 Phosphosugar isomerase n=4 Tax=Lactobacillus Rep... 107 4e-22 UniRef50_C1RI47 Transcriptional regulator n=1 Tax=Cellulomonas f... 107 5e-22 UniRef50_A3ZL92 Putative uncharacterized protein n=1 Tax=Blastop... 106 6e-22 UniRef50_Q1IST9 KpsF/GutQ family protein n=5 Tax=Bacteria RepID=... 106 6e-22 UniRef50_C2K0T0 Possible transcriptional regulator n=2 Tax=Lacto... 106 7e-22 UniRef50_B6BVE7 Arabinose 5-phosphate isomerase n=1 Tax=beta pro... 106 7e-22 UniRef50_B3QSH3 KpsF/GutQ family protein n=1 Tax=Chloroherpeton ... 106 9e-22 UniRef50_A5EVJ8 Arabinose 5-phosphate isomerase n=1 Tax=Dichelob... 106 9e-22 UniRef50_C7M027 Transcriptional regulator, RpiR family n=1 Tax=A... 106 1e-21 UniRef50_UPI00016A65F3 transcriptional regulator, RpiR family pr... 106 1e-21 UniRef50_Q2LUX9 Arabinose-5-phosphate isomerase n=1 Tax=Syntroph... 106 1e-21 UniRef50_B0PES3 Putative uncharacterized protein n=1 Tax=Anaerot... 106 1e-21 UniRef50_D1AIY1 KpsF/GutQ family protein n=11 Tax=Fusobacteriace... 105 1e-21 UniRef50_C6X0T7 Arabinose 5-phosphate isomerase n=2 Tax=Flavobac... 105 1e-21 UniRef50_A8IPW3 Sugar isomerase n=58 Tax=Bacteria RepID=A8IPW3_A... 105 2e-21 UniRef50_C7NES0 KpsF/GutQ family protein n=6 Tax=Fusobacteriacea... 105 2e-21 UniRef50_Q0FF93 KpsF/GutQ family protein n=1 Tax=Rhodobacterales... 105 2e-21 UniRef50_Q1MS86 FOG: CBS domain n=10 Tax=Desulfovibrionales RepI... 105 2e-21 UniRef50_C0QVG6 D-arabinose-5-phosphate isomerase n=1 Tax=Brachy... 104 3e-21 UniRef50_C3RLJ5 Transcriptional regulator n=2 Tax=Bacteria RepID... 104 4e-21 UniRef50_B5G8P1 Transcriptional regulator (Fragment) n=1 Tax=Str... 104 4e-21 UniRef50_C3WCJ9 Predicted protein n=1 Tax=Fusobacterium mortifer... 104 4e-21 UniRef50_A8TDJ4 Glucosamine--fructose-6-phosphate aminotransfera... 104 4e-21 UniRef50_Q1Q2H0 Putative uncharacterized protein n=1 Tax=Candida... 104 4e-21 UniRef50_D0D8D8 Transcriptional regulator, RpiR family n=1 Tax=C... 104 4e-21 UniRef50_Q9WXZ5 Glucosamine--fructose-6-phosphate aminotransfera... 104 4e-21 UniRef50_C3WG43 SIS domain-containing protein n=1 Tax=Fusobacter... 104 4e-21 UniRef50_Q0BL14 Arabinose-5-phosphate isomerase n=20 Tax=Gammapr... 103 5e-21 UniRef50_B9Y5H0 Putative uncharacterized protein n=1 Tax=Holdema... 103 6e-21 UniRef50_D0XK10 KpsF/GutQ family protein n=1 Tax=Brevundimonas s... 103 6e-21 UniRef50_C3RMD5 Transcriptional regulator (Fragment) n=2 Tax=Bac... 103 7e-21 UniRef50_B5H4P8 Predicted protein n=4 Tax=Streptomyces RepID=B5H... 103 8e-21 UniRef50_D1PYZ2 Arabinose 5-phosphate isomerase n=9 Tax=Prevotel... 103 8e-21 UniRef50_Q3B0E2 KpsF/GutQ n=16 Tax=Cyanobacteria RepID=Q3B0E2_SYNS9 103 8e-21 UniRef50_C1QDK1 KpsF/GutQ family protein n=1 Tax=Brachyspira mur... 103 8e-21 UniRef50_Q0RUQ9 Possible 6-phospho-3-hexuloisomerase n=3 Tax=Rho... 103 8e-21 UniRef50_Q58815 Mja gf6p intein n=17 Tax=cellular organisms RepI... 103 9e-21 UniRef50_Q3Z924 Glucosamine--fructose-6-phosphate aminotransfera... 103 1e-20 UniRef50_Q8U472 Hexulose-6-phosphate synthase (D-arabino 3-hexul... 103 1e-20 UniRef50_B5XTC8 Transcriptional regulator, RpiR family n=6 Tax=E... 103 1e-20 UniRef50_C4ICA8 SIS domain protein n=2 Tax=Clostridium butyricum... 102 1e-20 UniRef50_Q4A7H2 Putative uncharacterized protein n=6 Tax=Mycopla... 102 1e-20 UniRef50_UPI0001C35662 hypothetical protein ChatD1_20770 n=1 Tax... 102 1e-20 UniRef50_O26273 Glucosamine--fructose-6-phosphate aminotransfera... 102 1e-20 UniRef50_C9D0H7 Putative transcriptional regulator RpiR family p... 102 2e-20 UniRef50_Q1CZW3 GutQ protein n=6 Tax=Cystobacterineae RepID=Q1CZ... 101 2e-20 UniRef50_B1CBZ6 Putative uncharacterized protein n=1 Tax=Anaerof... 101 2e-20 UniRef50_C3RLV2 Predicted protein n=2 Tax=Bacteria RepID=C3RLV2_... 101 2e-20 UniRef50_D2Q6J1 Sugar isomerase or sugar amino transferase n=6 T... 101 2e-20 UniRef50_C1NBK9 KpsF/GutQ family protein n=1 Tax=Escherichia sp.... 101 2e-20 UniRef50_Q11YC7 Sugar phosphate isomerase, KpsF/GutQ family n=27... 101 2e-20 UniRef50_A6CXK8 D-arabinose 5-phosphate isomerase n=1 Tax=Vibrio... 101 2e-20 UniRef50_A7MI97 Putative uncharacterized protein n=3 Tax=Enterob... 101 2e-20 UniRef50_D0ZGM2 Sugar isomerase (SIS) n=5 Tax=Enterobacteriaceae... 101 2e-20 UniRef50_B4U6U7 KpsF/GutQ family protein n=1 Tax=Hydrogenobaculu... 101 3e-20 UniRef50_B0N5S7 Putative uncharacterized protein n=2 Tax=Bacteri... 101 3e-20 UniRef50_Q4FNC0 Arabinose 5-phosphate isomerase n=3 Tax=Candidat... 101 3e-20 UniRef50_B1I1Y6 Glucosamine--fructose-6-phosphate aminotransfera... 101 3e-20 UniRef50_C6A1J9 Bifunctional D-arabino 3-hexulose-6-phosphate fo... 101 4e-20 UniRef50_D0ALV4 Transcriptional regulator (Fragment) n=2 Tax=Ent... 101 4e-20 UniRef50_Q8R841 Glucosamine--fructose-6-phosphate aminotransfera... 100 4e-20 UniRef50_Q1ZIS3 GutQ protein n=1 Tax=Psychromonas sp. CNPT3 RepI... 100 5e-20 UniRef50_C9B1X5 Putative uncharacterized protein n=2 Tax=Enteroc... 100 6e-20 UniRef50_Q9Z826 Uncharacterized protein CPn_0526/CP_0226/CPj0526... 100 6e-20 UniRef50_A0RRT4 KpsF/GutQ n=18 Tax=Bacteria RepID=A0RRT4_CAMFF 100 6e-20 UniRef50_D2PN41 Arabinose-5-phosphate isomerase n=1 Tax=Kribbell... 100 6e-20 UniRef50_O27589 Conserved protein n=6 Tax=Methanobacteriaceae Re... 100 6e-20 UniRef50_C4X1H8 Putative uncharacterized protein n=3 Tax=Klebsie... 100 7e-20 UniRef50_A1SXE5 DNA-binding helix-turn-helix domain-containing t... 100 7e-20 UniRef50_C3RNI1 Predicted protein n=2 Tax=Bacteria RepID=C3RNI1_... 100 7e-20 UniRef50_Q048M7 Transcriptional regulator n=2 Tax=Lactobacillus ... 100 7e-20 UniRef50_C8S7V2 6-phospho 3-hexuloisomerase n=1 Tax=Ferroglobus ... 100 9e-20 UniRef50_C3MFV3 Sugar isomerase, KpsF/GutQ family protein n=8 Ta... 100 1e-19 UniRef50_D0SVQ9 Arabinose 5-phosphate isomerase n=2 Tax=Acinetob... 100 1e-19 UniRef50_C9AU51 Predicted protein n=2 Tax=Enterococcus casselifl... 100 1e-19 UniRef50_B5I9S2 SIS domain protein n=2 Tax=Aciduliprofundum boon... 100 1e-19 UniRef50_D1YX72 Glucosamine--fructose-6-phosphate aminotransfera... 100 1e-19 UniRef50_D1Y338 Arabinose 5-phosphate isomerase n=1 Tax=Pyramido... 100 1e-19 UniRef50_B1C5Y4 Putative uncharacterized protein n=1 Tax=Anaerof... 99 2e-19 UniRef50_Q1N8R1 Sugar isomerase, KpsF/GutQ n=1 Tax=Sphingomonas ... 99 2e-19 UniRef50_A6VUC5 KpsF/GutQ family protein n=12 Tax=Bacteria RepID... 99 2e-19 UniRef50_Q723E8 SIS domain protein n=15 Tax=Firmicutes RepID=Q72... 98 2e-19 UniRef50_C1I4S5 Putative uncharacterized protein n=1 Tax=Clostri... 98 2e-19 UniRef50_A1RWB5 Glutamine--fructose-6-phosphate transaminase n=1... 98 2e-19 UniRef50_O68956 Glucosamine--fructose-6-phosphate aminotransfera... 98 2e-19 UniRef50_B1C072 Putative uncharacterized protein n=2 Tax=unclass... 98 2e-19 UniRef50_B7ATA5 Putative uncharacterized protein n=4 Tax=Bacteri... 98 2e-19 UniRef50_Q6MHW0 Glucosamine--fructose-6-phosphate aminotransfera... 98 2e-19 UniRef50_D2TXX6 Hex regulon repressor (RpiR-family transcription... 98 3e-19 UniRef50_A9A435 Glucosamine--fructose-6-phosphate aminotransfera... 98 3e-19 UniRef50_C0D3Y2 Putative uncharacterized protein (Fragment) n=1 ... 98 4e-19 UniRef50_Q9LBW5 3-hexulose-6-phosphate isomerase n=2 Tax=Actinom... 97 5e-19 UniRef50_UPI000196C61B hypothetical protein CATMIT_02058 n=1 Tax... 97 6e-19 UniRef50_A5VTJ4 Sugar isomerase, KpsF/GutQ n=36 Tax=Rhizobiales ... 97 6e-19 UniRef50_Q9YCQ6 Glucosamine--fructose-6-phosphate aminotransfera... 97 7e-19 UniRef50_Q9F5F9 Riorf33 protein n=1 Tax=Agrobacterium rhizogenes... 97 9e-19 UniRef50_O28478 Uncharacterized protein AF_1796 n=1 Tax=Archaeog... 97 9e-19 UniRef50_B9KZ32 Glucosamine--fructose-6-phosphate aminotransfera... 97 9e-19 UniRef50_A4FI47 Transcriptional regulator, RpiR family n=2 Tax=P... 97 9e-19 UniRef50_A0AGT3 Complete genome n=1 Tax=Listeria welshimeri sero... 97 9e-19 UniRef50_C1PCJ9 Glucosamine/fructose-6-phosphate aminotransferas... 97 9e-19 UniRef50_D1C5T9 Glutamine--fructose-6-phosphate transaminase (Is... 97 9e-19 UniRef50_A3VAL1 Putative uncharacterized protein n=1 Tax=Rhodoba... 97 1e-18 UniRef50_Q8KG38 Glucosamine--fructose-6-phosphate aminotransfera... 96 1e-18 UniRef50_Q7UL04 Putative uncharacterized protein n=1 Tax=Rhodopi... 96 1e-18 UniRef50_A6M2T4 Transcriptional regulator, RpiR family n=3 Tax=C... 96 1e-18 UniRef50_C9AA73 Predicted protein n=1 Tax=Enterococcus casselifl... 96 1e-18 UniRef50_C8WES2 KpsF/GutQ family protein n=3 Tax=Zymomonas mobil... 96 1e-18 UniRef50_D1JGX9 Glucosamine--fructose-6-phosphateaminotransferas... 96 2e-18 UniRef50_C2D7F4 Glutamine--fructose-6-phosphate transaminase (Is... 95 2e-18 UniRef50_A3ERU9 Glucosamine--fructose-6-phosphate aminotransfera... 95 2e-18 UniRef50_C5A3S6 Glucosamine--fructose-6-phosphate aminotransfera... 95 2e-18 UniRef50_Q03Y13 Sugar phosphate isomerase with CBS domains n=6 T... 95 2e-18 UniRef50_UPI00016AAD50 transcriptional regulator, RpiR family pr... 95 2e-18 UniRef50_C7LLH6 SIS domain protein n=3 Tax=Mycoplasma mycoides g... 95 3e-18 UniRef50_Q7MCJ0 Transcriptional regulator n=4 Tax=Vibrionaceae R... 95 3e-18 UniRef50_B0N144 Putative uncharacterized protein n=2 Tax=Bacteri... 95 3e-18 UniRef50_C2JQK2 Phosphosugar-binding transcriptional regulator n... 95 3e-18 UniRef50_Q96XH0 581aa long hypothetical glucosamine--fructose-6-... 95 3e-18 UniRef50_A9KTD7 Glucosamine--fructose-6-phosphate aminotransfera... 95 3e-18 UniRef50_B5JQT0 Sugar isomerase, KpsF/GutQ family n=1 Tax=Verruc... 94 4e-18 UniRef50_D2RHI3 6-phospho 3-hexuloisomerase n=1 Tax=Archaeoglobu... 94 4e-18 UniRef50_A9B0V2 Glutamine--fructose-6-phosphate transaminase (Is... 94 4e-18 UniRef50_C1ZGN7 KpsF/GutQ family protein n=1 Tax=Planctomyces li... 94 4e-18 UniRef50_Q8TUU0 Predicted sugar phosphate isomerase n=1 Tax=Meth... 94 4e-18 UniRef50_C6XG05 Polysialic acid capsule expression protein n=1 T... 94 4e-18 UniRef50_Q0RXZ1 Possible transcriptional regulator n=1 Tax=Rhodo... 94 5e-18 UniRef50_Q6ET44 Os02g0158300 protein n=7 Tax=Magnoliophyta RepID... 94 6e-18 UniRef50_C3RJC2 Predicted protein n=2 Tax=Bacteria RepID=C3RJC2_... 94 6e-18 UniRef50_Q9HT00 Glucosamine--fructose-6-phosphate aminotransfera... 93 7e-18 UniRef50_A3DPP9 Glutamine--fructose-6-phosphate transaminase n=1... 93 7e-18 UniRef50_Q6MA93 Putative Gut Q protein n=2 Tax=Parachlamydiaceae... 93 7e-18 UniRef50_Q8D2M7 YrbH protein n=1 Tax=Wigglesworthia glossinidia ... 93 8e-18 UniRef50_UPI0001C30EDC glucosamine/fructose-6-phosphate aminotra... 93 8e-18 UniRef50_D1CIK3 Glutamine--fructose-6-phosphate transaminase (Is... 93 8e-18 UniRef50_Q8AAB1 Glucosamine--fructose-6-phosphate aminotransfera... 93 8e-18 UniRef50_A4EA48 Putative uncharacterized protein n=1 Tax=Collins... 93 9e-18 UniRef50_Q9ZD42 Uncharacterized protein RP505 n=16 Tax=cellular ... 93 9e-18 UniRef50_A5UNH8 Glucosamine--fructose-6-phosphate aminotransfera... 93 9e-18 UniRef50_B1LR09 Sugar isomerase, KpsF/GutQ family n=21 Tax=Bacte... 93 9e-18 UniRef50_A4THA2 Phosphosugar isomerase/binding protein n=30 Tax=... 93 1e-17 UniRef50_Q4J6D9 Glucosamine--fructose-6-phosphate aminotransfera... 93 1e-17 UniRef50_C9AU43 Putative uncharacterized protein n=3 Tax=Enteroc... 93 1e-17 UniRef50_B9KGQ0 Glucosamine--fructose-6-phosphate aminotransfera... 93 1e-17 UniRef50_D1PBX9 Glutamine-fructose-6-phosphate transaminase n=13... 93 1e-17 UniRef50_O26351 Uncharacterized protein MTH_249 n=1 Tax=Methanot... 92 2e-17 UniRef50_Q6GES3 Glucosamine--fructose-6-phosphate aminotransfera... 92 2e-17 UniRef50_Q1MQL2 Glucosamine 6-phosphate synthetase, contains ami... 92 2e-17 UniRef50_A1RZ63 Glutamine amidotransferase, class-II n=1 Tax=The... 92 2e-17 UniRef50_Q9M1T1 Sugar-phosphate isomerase-like protein n=10 Tax=... 92 2e-17 UniRef50_Q1IND2 Sugar isomerase (SIS) n=2 Tax=Acidobacteria RepI... 92 2e-17 UniRef50_C8ZXB1 Putative uncharacterized protein n=4 Tax=Enteroc... 92 2e-17 UniRef50_D0RRD5 Arabinose 5-phosphate isomerase n=2 Tax=alpha pr... 92 3e-17 UniRef50_D1PR02 Transcriptional regulator, RpiR family n=1 Tax=S... 92 3e-17 UniRef50_A3WGF3 CBS domain:Sugar isomerase (SIS):KpsF/GutQ famil... 91 3e-17 UniRef50_A6ALT5 Transcriptional regulator, RpiR family protein n... 91 4e-17 UniRef50_Q04HE6 Hexulose-6-phosphate isomerase n=6 Tax=Firmicute... 91 4e-17 UniRef50_C2DAE3 3-hexulose-6-phosphate isomerase n=7 Tax=Enteroc... 91 5e-17 UniRef50_B0RAL7 6-phospho-3-hexuloisomerase n=3 Tax=Micrococcine... 91 5e-17 UniRef50_O83833 Glucosamine--fructose-6-phosphate aminotransfera... 91 5e-17 UniRef50_Q1QAN2 KpsF/GutQ family protein n=2 Tax=Psychrobacter R... 91 5e-17 UniRef50_D1RBC9 Putative uncharacterized protein n=1 Tax=Parachl... 91 5e-17 UniRef50_C3RI60 Predicted protein n=2 Tax=Bacteria RepID=C3RI60_... 90 6e-17 UniRef50_Q6F0Y2 Putative uncharacterized protein n=1 Tax=Mesopla... 90 6e-17 UniRef50_A8MC94 Glutamine amidotransferase class-II n=1 Tax=Cald... 90 6e-17 UniRef50_Q024T7 KpsF/GutQ family protein n=2 Tax=Bacteria RepID=... 90 6e-17 UniRef50_C2DAD6 3-hexulose-6-phosphate isomerase n=2 Tax=Enteroc... 90 7e-17 UniRef50_Q72V57 Glucosamine--fructose-6-phosphate aminotransfera... 90 7e-17 UniRef50_Q14LK5 Hypothetical transmembrane protein n=1 Tax=Spiro... 90 8e-17 UniRef50_A8A8V3 Glutamine--fructose-6-phosphate transaminase n=1... 90 8e-17 UniRef50_C6QLS8 6-phospho 3-hexuloisomerase n=2 Tax=Geobacillus ... 90 8e-17 UniRef50_Q8Q038 Glucosamine--fructose-6-phosphate aminotransfera... 90 9e-17 UniRef50_B3SFH4 Putative uncharacterized protein n=1 Tax=Trichop... 90 9e-17 UniRef50_C2KYX2 Glutamine--fructose-6-phosphate transaminase (Is... 90 9e-17 UniRef50_B5S7Q3 Putative uncharacterized protein (Fragment) n=1 ... 90 1e-16 UniRef50_P17115 Protein gutQ n=113 Tax=Gammaproteobacteria RepID... 90 1e-16 UniRef50_B5YDY2 Glucosamine--fructose-6-phosphate aminotransfera... 90 1e-16 UniRef50_Q6MBL9 Probable glutamine-fructose-6-phosphate transami... 89 1e-16 UniRef50_UPI00016C3AB5 hypothetical protein GobsU_16589 n=1 Tax=... 89 1e-16 UniRef50_Q9V249 Glucosamine--fructose-6-phosphate aminotransfera... 89 1e-16 UniRef50_C4FAU5 Putative uncharacterized protein n=1 Tax=Collins... 89 2e-16 UniRef50_Q9YAK0 Uncharacterized protein APE_1940.1 n=23 Tax=Ther... 89 2e-16 UniRef50_UPI0001C420F8 glucosamine-fructose-6-phosphate aminotra... 89 2e-16 UniRef50_C8W8B6 Sugar isomerase (SIS) n=13 Tax=Bacteria RepID=C8... 89 2e-16 UniRef50_Q5HM69 Glucosamine--fructose-6-phosphate aminotransfera... 89 2e-16 UniRef50_A4INF7 Predicted sugar phosphate aminotransferaseinvolv... 89 2e-16 UniRef50_B1L7C4 Sugar isomerase (SIS) n=1 Tax=Candidatus Korarch... 89 2e-16 UniRef50_C3RNG5 Predicted protein n=3 Tax=Bacteria RepID=C3RNG5_... 88 2e-16 UniRef50_C1E1Z8 Predicted protein n=1 Tax=Micromonas sp. RCC299 ... 88 2e-16 UniRef50_C6HYL9 Glucosamine--fructose-6-phosphate aminotransfera... 88 3e-16 UniRef50_C9KL97 N-acetylmuramic acid 6-phosphate etherase n=1 Ta... 88 3e-16 UniRef50_A6DIX0 Glucosamine-fructose-6-phosphate aminotransferas... 88 3e-16 Sequences not found previously or not previously below threshold: >UniRef50_C7MQM6 Transcriptional regulator, RpiR family n=5 Tax=Actinomycetales RepID=C7MQM6_SACVD Length = 333 Score = 251 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 77/278 (27%), Positives = 132/278 (47%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L+RIR GLA++++++A +L P + S ++A A S+++V +F + +G Sbjct: 38 SPLVRIRSLLPGLARAEQRVAKVVLEDPSSVARRSITEVAMAAKTSETTVTRFCKAIGVG 97 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L++AL+ A S + I DD L V K+ + A+ T + Sbjct: 98 GYPQLRIALAADTARTEAKSSRDLGGDITADDDLASVVSKVSFADARAVEETAEQLDIAE 157 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L +L A R+ + G+GAS VA + KL +IG + A D H +L + S D Sbjct: 158 LTRVTELLAEATRVDVYGVGASAFVAADLQQKLHRIGRVSFAWSDTHIMLTSAAVLSEGD 217 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + +AIS++G + A G +AIT F + + A H L T A E S + Sbjct: 218 VAVAISHSGATTDTVEALRVAKEHGATTVAITNFPRSPIASVADHVLTTAARETTFRSGA 277 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ AQ + D LFI + Q+ ++ + + + V Sbjct: 278 TASRIAQLTVIDCLFIGVAQRRMDESMAALEATREAVN 315 >UniRef50_Q8R7I8 Transcriptional regulator n=3 Tax=Firmicutes RepID=Q8R7I8_THETN Length = 285 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 81/281 (28%), Positives = 154/281 (54%), Gaps = 5/281 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N +L+I+ Y L ++KK+ADY+L ++ +LS +LA + G ++++V+F +++G Sbjct: 8 NVILKIQSIYNSLTNAEKKVADYVLENAESVIYLSITELAEKCGTGETTIVRFCRRIGLS 67 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF KL L++ +A P IH I +DPL ++ +K+ ENT A+ T+ + S + Sbjct: 68 GFQEFKLNLAKEIAE----PETSIHENISFNDPLDVLVQKITTENTLAISNTVKLLSMSE 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + V + +AR+I G+GASG A + +K M++G N A D H + + + D Sbjct: 124 LEKAVDAIINARKIQFYGVGASGYTALDAKYKFMRLGLNVDANLDAHIQAISAVSLTDKD 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS++G ++ G +V+AIT + + + A L T A+E S + Sbjct: 184 VAVGISFSGSTKDTVETCRLAKEAGARVIAITNYARSPITSVADIVLLTSAKETPLRSGA 243 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHS-EALVKKL 281 +++ AQ + D+L+ A+ + + A + + + +A+++KL Sbjct: 244 LTSKIAQLHILDILYTAVAVKLKDKAVQELNKTAKAVLEKL 284 >UniRef50_C6WFA6 Transcriptional regulator, RpiR family n=2 Tax=Actinomycetales RepID=C6WFA6_ACTMD Length = 304 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 79/277 (28%), Positives = 131/277 (47%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L++IR GLA++++++A +L P T H S ++A AG S+++V +F + +G Sbjct: 9 SPLVKIRSLLPGLARAEQRVAKVVLDNPATVAHRSITEVAESAGTSETTVTRFCKAIGVG 68 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L++AL+ A + I D LR V K+ + A+ T + + Sbjct: 69 GYPELRIALAADTARTAARTDRDLGGDIGPGDDLRQVVGKVAFADARAVEETAEQLNVDT 128 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V + A R+ + G GAS VA + KL +IG A D H L + + D Sbjct: 129 LQAVVDAVARAGRVDVYGFGASAFVAFDLQQKLHRIGRTCFAWNDTHIALTSAAVLTGAD 188 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS+TG E A G +A+T F + + + A H L T A E S + Sbjct: 189 VAVGISHTGSTTETVEALRVARERGATTVALTNFPRSPISEVADHVLTTAARETTFRSGA 248 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +++ AQ + D LFI + Q +E A + + V Sbjct: 249 MASRIAQLTVVDCLFIGVAQHHVESATSALEATYDAV 285 >UniRef50_A4F6M8 RpiR-family transcriptional regulator n=7 Tax=Actinomycetales RepID=A4F6M8_SACEN Length = 308 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 78/277 (28%), Positives = 134/277 (48%), Gaps = 1/277 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L+RIR GLA++++++A+ +L P + S ++A AG S+++V +F + +G Sbjct: 14 SPLIRIRSLLPGLARAEQRVANIVLADPASVARRSITEVAEAAGTSETTVTRFCKAIGVG 73 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L++AL+ A + + I +D +R + EK+ + A+ T + E Sbjct: 74 GYPDLRIALAADTARTSSR-DRDLGSDIGPEDDVRKIIEKVSYADAKAVEETADQLDAET 132 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V + ARRI + G+GAS VA + KL +IG A D H L + D Sbjct: 133 LRSLVDAVARARRIDVYGVGASAFVALDLQQKLHRIGLTCFAWSDTHNALTSAAVLREGD 192 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS+TG E A E + G A+T F + + + A H L T E S + Sbjct: 193 VAIGISHTGATTETVEALQEAGKRGATTAALTNFARSPITEVADHVLTTAVRETTYRSGA 252 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +++ Q + D LFI + Q+ L+ + + V Sbjct: 253 MASRIGQLTVIDCLFIGVAQRHLDQTKAALEATYEAV 289 >UniRef50_C0ZD50 Transcriptional regulator n=32 Tax=Bacillales RepID=C0ZD50_BREBN Length = 288 Score = 239 bits (611), Expect = 7e-62, Method: Composition-based stats. Identities = 69/277 (24%), Positives = 138/277 (49%), Gaps = 3/277 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L ++R Y L+ ++++ADY+L H S +LA++ + ++V + ++LG++G Sbjct: 11 VLTQLRAIYTQLSGKEQQIADYILEHASEIIHFSITELADQCQCADATVFRLCRRLGFRG 70 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + A K+AL+ + + ++ I+ DD + + EK+ N + T + ++++L Sbjct: 71 YQAFKIALASEVTNPKQTIHQEIN---LDDDDVSAIAEKIFTANIETIRDTQQIINKDEL 127 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V+ L +A RI G G S ++AQ+ K M+ G D H + + + + Sbjct: 128 MKIVSCLENASRIEFYGSGGSAVIAQDAYHKFMRTGIPCLYHSDAHYQVMSASLLTKGAV 187 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ IS++G +++ A G K + IT + + L + A CLYT + E + ++ Sbjct: 188 VVGISHSGSNKDILAALQVAKEAGAKTIGITSYGKSPLVRLADMCLYTTSRETVFRTEAL 247 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S+ AQ L DLL++A+ + E I+H + Sbjct: 248 SSRLAQLSLIDLLYVAVSLRRQEDTIANIQHIREAIS 284 >UniRef50_B8E0M8 Transcriptional regulator, RpiR family n=2 Tax=Dictyoglomus RepID=B8E0M8_DICTD Length = 281 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 75/277 (27%), Positives = 139/277 (50%), Gaps = 4/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +I+++ + S++K+A+Y+L + HL +LA GVS++++V+ +KLG + Sbjct: 4 SILEKIKEQKESFRDSEEKVANYILARWQEVLHLPITELAERIGVSEATIVRMCKKLGLR 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+AL+ P +H ++ D L + +K+ N AM +TLNV S ++ Sbjct: 64 GFQELKIALATE----KIQPIKTVHQAVQEGDDLETILKKVFSANIRAMESTLNVISVKE 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + + +AR++ + G+G SG VA + K MK G A D H + + P D Sbjct: 120 IERAIDAILNARQLQIYGVGGSGPVALDAQHKFMKTGIPTVAYIDSHMMAMSASILEPQD 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++ IS +G +++ A + G + IT + L + L +EE + S Sbjct: 180 VVIGISASGSSKDIFEALELAKNRGATTIGITHYAKTPLDRVLDIKLSVSSEETFYRTES 239 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 SA AQ + D L+I + + L+ E ++ + + Sbjct: 240 TSARIAQLSIIDTLYIGVALKRLDKMIENLKLTREAI 276 >UniRef50_UPI0001788119 transcriptional regulator, RpiR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788119 Length = 278 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 75/278 (26%), Positives = 140/278 (50%), Gaps = 4/278 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L+R+R+ Y L S++K+A ++L +P +S LA +G SQ+++V+ + +G+KG+ Sbjct: 5 LVRLREVYDSLNPSERKVAAFILQEPAEMIQMSVADLAVRSGSSQAAIVRLCKTMGFKGY 64 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 LKL ++ L P + IR +D + + + + N ++ T+ + E + Sbjct: 65 QDLKLKVAGDLQE----PLATGYQDIRPNDSISAIIQNVSNNNIQSIRDTMKIMEEGMVE 120 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 E V L ++RI + G+GAS L+ + K ++I + D H L + +PDD Sbjct: 121 EAVLALDQSKRIFMFGVGASNLIGMDAQQKFLRINKVCISFPDPHVQLTSAVLLTPDDAA 180 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + ISY+G E+ AA G K + IT + + L + LYT + E S ++S Sbjct: 181 VCISYSGETDEVIRAAAIAKEKGCKTIGITKYGDSTLSRSVDIPLYTSSTENEIRSGAMS 240 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + Q L D+L++ + ++ E + + + S +K+L Sbjct: 241 SRITQLNLIDILYLGVASRNYENSVKYLDESRRAIKRL 278 >UniRef50_C6Q8T9 Transcriptional regulator, RpiR family n=1 Tax=Thermoanaerobacter mathranii subsp. mathranii str. A3 RepID=C6Q8T9_9THEO Length = 282 Score = 234 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 71/278 (25%), Positives = 131/278 (47%), Gaps = 4/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L I++ S+ K+A Y+L D LS +LA S++S+V+F + +G K Sbjct: 3 DILTVIKELEATFKPSEAKIAKYILDNADVVTELSINELARACDTSEASIVRFCRTIGLK 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ ++ +L+ Q + + I DD + V +K+ N A+ T+++ + Sbjct: 63 GFQELKIKIAVSLSKQ----TKKLDGGITDDDDVSDVIQKIANFNKQAIDNTISLLDVKS 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V L +A +I G+ ASG VA + K +I A +D H L + D Sbjct: 119 IIKAVDALSNANKIDFYGVAASGTVAYDAMLKFARINIPCTAYQDTHLQLTSAANLKKGD 178 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + ISY+G RE+ A + G +++T F L + A L+ +EE S + Sbjct: 179 VAFGISYSGCTREIVEALEVAKEAGATTISLTKFGQFPLVKVADINLFVSSEEPLFRSGA 238 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ AQ + D+LFI + ++ + + ++ + Sbjct: 239 TASRIAQLTVIDILFILVAKRKYNDVVKFLENTTEALS 276 >UniRef50_Q8RD36 Uncharacterized HTH-type transcriptional regulator TTE0211 n=3 Tax=Clostridia RepID=Y211_THETN Length = 282 Score = 233 bits (594), Expect = 7e-60, Method: Composition-based stats. Identities = 72/278 (25%), Positives = 135/278 (48%), Gaps = 4/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L IR+ S+ K+A Y+L P LS +LAN S++S+++F + +G K Sbjct: 3 DVLAVIREMSSSFTPSEAKIAKYILENPTVVTELSVNELANACDTSEASIIRFCRTIGLK 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ ++ +LA Q + + I +D + V +K+ N A+ +T+ V + E+ Sbjct: 63 GFQELKIKIAVSLAKQ----TRKLDGGITSEDDVMAVIQKIANFNKQAIDSTIAVLNAEE 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + L +A +I G+ ASG+VA + K +I A +D H L + D Sbjct: 119 LTKAAEALANANKIDFYGVAASGVVAYDAMLKFSRINIPCTAYQDTHLQLTSAVNLKKGD 178 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + ISY+G +E+ A G +++T + + L + A L+ +EE + + Sbjct: 179 VAFGISYSGATKEIVEAIQTAKEAGATTISLTKYGQSPLAKAADINLFVSSEEAMFRAGA 238 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +++ AQ + D+LFI + Q+ + ++ ++ Sbjct: 239 MASRIAQLTVIDILFILVAQKKYNDVVRYLENTSEVLS 276 >UniRef50_A8FJ30 Possible RpiR family transcriptional regulator n=51 Tax=Bacillus RepID=A8FJ30_BACP2 Length = 285 Score = 232 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 65/277 (23%), Positives = 136/277 (49%), Gaps = 3/277 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 + +IR +GL K +A+++ +P HLS +LA + S++++ + ++LG++GF Sbjct: 9 IEKIRAASRGLPPKLKAIAEHITSEPRDIIHLSIVELAKKTASSEATIFRLCKRLGFEGF 68 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 LK+A+++ + ++ + ++ DD + + +K+ + N +A+ + + + E + Sbjct: 69 QDLKIAIAQEI---DQTKPNYVDEEMSLDDDMAVFMQKVFQTNISALKDSFQLLNPEDVE 125 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 + + ++ A+R+ G G SGL+A + K M+ G N D H + + Sbjct: 126 KAIQIIHEAKRLEFYGSGGSGLIATDAFHKFMRTGINCIVHTDSHFQAMSAGLLDQHSTV 185 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + IS++G ++L A G K + IT + + L Q A LYT +E A + ++S Sbjct: 186 IGISHSGRNKDLLDAMKTAKSKGAKTIGITSYQRSPLSQLADVTLYTATQETAFRTEAMS 245 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A AQ + D+L+ AL + ++ + + Sbjct: 246 ARLAQLTVIDVLYFALAHLRQQETITNLKQMRETISQ 282 >UniRef50_D2AR91 Putative transcriptional regulator, RpiR family n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AR91_STRRD Length = 299 Score = 232 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 69/281 (24%), Positives = 138/281 (49%), Gaps = 2/281 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + +R L + + +A +L P + + + +G S++++V+ A+ LG+ Sbjct: 11 NLVATVRAVLPSLTPAAQAIARLILDDPGMVARSTITEFSAVSGTSEATIVRTARALGFA 70 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ L+ AL+ A+A + + + DDPL V K+ + + A+ T + ++ Sbjct: 71 GYSQLRFALAAAVAREEP--ERLVPGDLGPDDPLTDVIAKVTRAESEALADTAAQLNPDR 128 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V + +ARR+ + G+GASGLVA + A KLM+IG ++ A D H L + D Sbjct: 129 LGAVVEAMTAARRVDVYGVGASGLVAADMAQKLMRIGRSSHAFTDAHLALTSAALLGEGD 188 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + +S TG ++ + G +AIT ++L + A H L + E A + Sbjct: 189 VTVGVSCTGETPDVIAPMRVARKAGATTVAITNNPRSSLAELAEHVLVSAGRETAFRPGA 248 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 +++ +Q ++ D +F+ + Q+ E + +R + + + + Sbjct: 249 LASRISQLLIVDCIFVGIAQRTFETSDAALRATRGALDEFM 289 >UniRef50_A7GD47 Transcriptional regulator, RpiR family n=10 Tax=Clostridium RepID=A7GD47_CLOBL Length = 281 Score = 230 bits (587), Expect = 3e-59, Method: Composition-based stats. Identities = 82/279 (29%), Positives = 145/279 (51%), Gaps = 3/279 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M LLRIR+ + + +S+KK+A+Y+ P S+Q++A + S +S+++F +K+GY Sbjct: 1 MGVLLRIRENFDSMTKSEKKIAEYIFKSPKDIISDSAQEIAIKTSTSPASIIRFTKKVGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 K AL ++ S I +D + + KL + + T + +E Sbjct: 61 NSLNEFKFALVAEEYTKE---STEFDYIINYNDSIDSIINKLGNKVIDTINDTKELVDDE 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 KL E V +++A I L G+GAS +VA +F +KL++I +D H LA + Sbjct: 118 KLLEAVKAIKNAETIYLYGVGASAMVAMDFQYKLLRINKKVMFQQDSHLQLAVSVHITNR 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ +AISY+G RE+NLA +E + G +AIT + L A L + E+ Sbjct: 178 DVAVAISYSGNTREVNLAVEEAKKNGATTIAITKCGKSILSNIADINLNIPSIEKDLRIG 237 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +IS+ +Q +TD LF+ + +++L+ + + ++ LV+ Sbjct: 238 AISSRTSQLFVTDSLFLGIAKENLDKTEKNLINTRNLVE 276 >UniRef50_Q97MK5 Uncharacterized HTH-type transcriptional regulator CA_C0191 n=5 Tax=Clostridia RepID=Y191_CLOAB Length = 283 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 70/276 (25%), Positives = 134/276 (48%), Gaps = 2/276 (0%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L+RI++ L S++K+A+Y+L LS ++LA ++G S+S+VV+ + L YKG+ Sbjct: 5 LIRIKEIINDLNPSERKIAEYILNNSKAISDLSIKELAGKSGSSKSAVVRLCKILNYKGY 64 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 ++A+++ + + + I D L + + + N ++ T+ V SEE + Sbjct: 65 KEFRIAIAKDTVNVDKEENRYTD--INPKDDLHTIIKNISYNNKKSIDNTMEVLSEELVE 122 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 + + A R+ GIGAS +VA + K M+I N A D H + D+ Sbjct: 123 KASEAISKAYRVDFYGIGASYIVAMDAFQKFMRINKNVRATPDTHLQVEFASNLKKGDVA 182 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 +AISYTG ++ + G +++T F N++ L+ ++ E S ++S Sbjct: 183 VAISYTGETKDTFESIKAAKEAGATTISVTKFGSNSISDLCDINLFVLSPEITFRSGAMS 242 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + AQ + D+LF ++ + E E + ++ + Sbjct: 243 SRIAQLNVIDILFTSVAGRMFEEVKEFLENTRKSTR 278 >UniRef50_A8S9N1 Putative uncharacterized protein n=3 Tax=Bacteria RepID=A8S9N1_9FIRM Length = 321 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 74/273 (27%), Positives = 144/273 (52%), Gaps = 1/273 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LLR+R+ L+ +++++A ++L PD L+ + LA + S SSVV+ + +G++ Sbjct: 36 NVLLRLREVQPSLSSTERQIAQFILENPDETTTLTIRDLARRSFSSPSSVVRICRVIGFQ 95 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ L+ AL+ LA+ E+ I D L+ + +K+ +N ++ T + ++ Sbjct: 96 GYKELRHALTLELATLGEN-GSHREKDITPQDSLQEIVDKVTHKNIQSLLDTQRLLLLDE 154 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L +CV ++ +AR ++L GIG+S VA++ K +++ D H+ L + ++ D Sbjct: 155 LEQCVELIANARTVLLFGIGSSLCVAKDTYLKFLRLDKPCVVNEDSHSQLLQARNATAQD 214 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + SY+G E+ EM G V+A+T + P+ + Q A H LY A E + + Sbjct: 215 VGIVFSYSGQTMEMIQCIKEMKAGGAPVIAVTRYYPSEVAQLADHVLYVAANESLFRNGA 274 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 +S+ +Q + D+L+ A ++ E R+ + Sbjct: 275 MSSRLSQLNVVDILYTAYASRNHEDTMRRLTKT 307 >UniRef50_UPI000196C77F hypothetical protein CATMIT_02718 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196C77F Length = 277 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 73/281 (25%), Positives = 148/281 (52%), Gaps = 6/281 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + RI++ L +++K++A Y++ P+ S+ +L + S ++VV+FA+KLGY Sbjct: 1 MSCITRIKEA--SLTETEKEIAQYIIEHPEQVLDDSAMKLGEKTHSSSAAVVRFAKKLGY 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GFP LK+ L++ L + N + D+ + + K+ + T ++ S Sbjct: 59 SGFPQLKIELAKDLVGS----IPEVDNLLHPDEDMATLMNKVHHSQIVTIDKTYHLLSAS 114 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V L A+ + L G+G S +V +F KLM+IG A D+H + +V + + Sbjct: 115 TLEDVVKALEQAKHVYLFGVGGSAIVCDDFIHKLMRIGKYACFYPDVHLQMTSVPNMTEE 174 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL + +SY+G + + AA + +AIT N L + H L ++EQ+ Sbjct: 175 DLAIFVSYSGETKGIVTAAKWAKEMNIPSVAITQSAYNKLGKLVDHVLTIPSQEQSLRIG 234 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++S+ ++ ++ DLL+ L++++ E ++I ++ +++++ Sbjct: 235 AMSSRYSSLIVVDLLYYGLVKRNKEKYAQKIINTRRIIQEM 275 >UniRef50_Q1LPJ6 Transcriptional regulator, RpiR family n=6 Tax=Burkholderiaceae RepID=Q1LPJ6_RALME Length = 338 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 68/278 (24%), Positives = 127/278 (45%), Gaps = 5/278 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RI Y L S+++LADY+ + L+ +LA+ AGVSQ ++ +F LGY G Sbjct: 1 MRDRILAVYDSLRPSERRLADYVARHGASVIRLTMPELADRAGVSQPTIARFCAALGYDG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F KL ++ + + +H + DD + K+ A + + N S +++ Sbjct: 61 FKEFKLQFAQNVGGG----TPFVHQDVEADDRPADIAGKVFDRTIATLMSVRNALSADQI 116 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + +L ARRI G G SG+VA + K ++G A D H + P D+ Sbjct: 117 EHGIRLLAGARRIEFYGCGNSGIVALDIQHKFFRLGIPTTAYSDPHVFSMSAALLRPGDV 176 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + +S +G ++ AA G VLA+T + + L + A C+++ EE + + Sbjct: 177 AVLVSNSGRTWDMLTAATLARSSGASVLALT-HSGSPLARLADVCVFSDVEEDSEVYTPM 235 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ +L D+L + + ++ ++A +++ Sbjct: 236 TSRICHLVLGDVLAAGVALDRADSVAAGLQRAKAHLRE 273 >UniRef50_C4V1J5 RpiR family transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1J5_9FIRM Length = 282 Score = 227 bits (578), Expect = 4e-58, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 118/278 (42%), Gaps = 4/278 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L I + L +S+KK+A+Y+L P+ + +LA G S +S+V+F + G KG Sbjct: 6 FLQLIEDKLGTLTKSEKKIAEYILEHPNRVVDATITELAERIGTSDASIVRFCKLFGCKG 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + K+ L+ + ++ + D + +K+ A ++ TL + + E L Sbjct: 66 YQNFKIRLAREVV----PHYKQLNVALEQHDTALTICQKIFNTEIATLHETLEMLNVEHL 121 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 +R A I + G G S +VAQ+ K +K+G + D + D+ Sbjct: 122 QTMAQRIREADYIEVFGSGGSSVVAQDIRHKFLKVGIRCTVLLDADIQAMSASLLKKGDV 181 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + IS+TG + + + G V+ +T + + + A + ++E S S Sbjct: 182 AIGISHTGSTKSVFHCLKMARKNGAYVILLTTQAKSPIGRIADLVIPVGSKETLFKSEST 241 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 SA A+ ++ D + + D + +I + + Sbjct: 242 SARIAELVVMDAVLALAVSDDYKKYNVKITKTRDATSE 279 >UniRef50_Q4LA29 Similar to transcriptional regulator n=1 Tax=Staphylococcus haemolyticus JCSC1435 RepID=Q4LA29_STAHJ Length = 283 Score = 227 bits (578), Expect = 4e-58, Method: Composition-based stats. Identities = 70/277 (25%), Positives = 134/277 (48%), Gaps = 2/277 (0%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L+ I L S++++A+Y+L PD + S Q+LA+ VS ++VV+ ++KL KGF Sbjct: 5 LIIIESSLSDLNPSERRVAEYILEHPDEIINYSVQKLADLTNVSVATVVRLSKKLKCKGF 64 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 LKL ++ L I D + V + + NT + T + S E + Sbjct: 65 QDLKLKIAYDLNEPGNIQRGYAE--IDKDYSIEEVTQTVFHNNTKTLRDTERILSTENIK 122 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 ++ ++R+ + GIGAS L+AQ+F KL +I + + S +D++ Sbjct: 123 HAFELIVNSRKTCIYGIGASALIAQDFKQKLTRIDYWCDVGSSFDEQVTLSANLSSEDVV 182 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 +AIS +G +++ + G KV++IT + N + + L+ + E+A S ++S Sbjct: 183 IAISSSGQTKDIVNSTQLAKEKGAKVISITKYGDNPISNLSDVQLFVSSSEKAKRSGAMS 242 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + A + D+L+I + D +++ ++ +K Sbjct: 243 SRIAMLSIIDILYICIASNDYLSNRQKLENTRKAIKN 279 >UniRef50_C4L752 Transcriptional regulator, RpiR family n=4 Tax=Bacillales RepID=C4L752_EXISA Length = 282 Score = 226 bits (577), Expect = 6e-58, Method: Composition-based stats. Identities = 81/279 (29%), Positives = 146/279 (52%), Gaps = 4/279 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MNG RIR Y L++ ++++ADY+L QP+ H + Q+A++ V++S+V +F Q++G+ Sbjct: 4 MNGTARIRGAYSTLSKKEQRIADYILKQPEQIIHHTINQVADDLDVAESTVFRFCQRVGF 63 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG+ ALK+AL+ + + P IH I D + EK+ N + +T + Sbjct: 64 KGYQALKIALASDVVA----PLQDIHEDITETDTALEIAEKIFSTNGKTIESTRQILEGV 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V + ARRI G G S +VA + K ++ G +A+ + H L + + Sbjct: 120 SLEKAVELFLGARRIEFFGSGGSAVVALDAYHKFVRSGLQVSAMLESHMQLMSASQLTTA 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ + IS++G +E A + G ++AIT + + L + A LYT+++E A S Sbjct: 180 DVAVVISHSGASKETLDIAKLLKEKGVPMIAITNYAKSPLSKIADVSLYTVSQETAFRSE 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++++ A+ L D LF A++ + E A ++ + Sbjct: 240 ALASRIAELSLIDALFTAVMMRRGEAARTSLQQMREAIS 278 >UniRef50_C5C2G7 Transcriptional regulator, RpiR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C2G7_BEUC1 Length = 285 Score = 226 bits (577), Expect = 6e-58, Method: Composition-based stats. Identities = 70/283 (24%), Positives = 133/283 (46%), Gaps = 2/283 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ I+ R A S +++A+ +L +P + +LA++ S++++V+F + LG Sbjct: 1 MSIQSSIQSRLDQFAPSMRRVAEAILERPQVVLEKTISELASQCETSETTIVRFCRTLGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHN--QIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 G+ L+L L+ + + + I +D L + K+ +T + TL Sbjct: 61 TGYVQLRLELATEIGRENAQRGELGDHGADILAEDGLAAMAAKIAFTDTLGIEETLASLD 120 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 E L V + +A R + G+G+SG A + KL +IG A D H + SS Sbjct: 121 IEHLERVVDAIDTAGRSVTYGVGSSGSSAADLQRKLFRIGRVAFTFDDPHDAVTAAALSS 180 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P D+ +A S++G RE + G + +A+T +AL + A L T E Sbjct: 181 PGDVAVAFSHSGATREALAFLATAGKHGARTVAVTNSAESALARAADIVLVTSVRETQFR 240 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S ++++ AQ M+ D +F+ + Q+ + + ++ + A ++L Sbjct: 241 SGAMASRIAQLMIVDCIFVGVAQRRYDQTVDALKSTYAAAQEL 283 >UniRef50_A8LV24 Transcriptional regulator, RpiR family n=7 Tax=Actinomycetales RepID=A8LV24_SALAI Length = 320 Score = 226 bits (576), Expect = 7e-58, Method: Composition-based stats. Identities = 74/278 (26%), Positives = 137/278 (49%), Gaps = 1/278 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L R+R L + +++A+++L P+ A + +LA +G S +++ +F + +G++G Sbjct: 33 VLARVRAGADDLTGALRRVAEHVLSDPEAAARATIVELAERSGTSPATITRFCRAMGFEG 92 Query: 63 FPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + L+L ++ + +V I +I+ DPLR V +++I +T AM+ T + + Sbjct: 93 YADLRLGIAAETGRARLAGWTVDIGREIQPGDPLRRVLDQIIAADTRAMHDTAALLDLAE 152 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + A R+ + G S LV + + L +IG A A D+H LA+ D Sbjct: 153 VERAAVAIAGASRVNIFGASGSALVGEEMQFMLHRIGVAAWAWSDVHEGLASAALLRVGD 212 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + L +S++G RE E G +A+TGF + L + A L T + + Sbjct: 213 VALGVSHSGQTRETIEMLAEAGSRGATTVAVTGFPRSPLAELADIALLTASRATTFRPDA 272 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +SA H Q ++ DLL+IA+ Q+ + A +R + V Sbjct: 273 LSARHPQLVVLDLLYIAVAQRTHDRAHAALRRTAQAVD 310 >UniRef50_C0CSK7 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CSK7_9FIRM Length = 282 Score = 226 bits (576), Expect = 7e-58, Method: Composition-based stats. Identities = 61/279 (21%), Positives = 118/279 (42%), Gaps = 4/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + IR R L +++K+A+Y+L D + + +LA A VS +SVV+F + LGYK Sbjct: 5 SCKEIIRGRMNYLTNTERKIANYVLENYDQVLNSNITELAENAKVSDASVVRFCRSLGYK 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ K+ ++ + ++ + D ++ K+ + + TL + + Sbjct: 65 GYQDFKINAAKDV----LPREKHLNPILEESDSPDMICHKIFNLEISVLERTLASLNMRE 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + + +R++ G G S LV Q+ K MKIG D L + D Sbjct: 121 VEKAAQFIFHGKRVLFFGSGGSLLVGQDALHKFMKIGVQVYVHEDRDLQLMASSLAGEGD 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++ IS++G + G + +A+ L + A + T +EE S S Sbjct: 181 VVIGISHSGSNYSVLRCLKNAKENGAQTIALVSRGKTPLSKIADVVIDTASEETIFQSES 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +S AQ + D L + + + + I+ + + Sbjct: 241 VSTRIAQLAIIDSLVSIVAFMNYDESYRAIQKTRKATSE 279 >UniRef50_A0KFB6 Transcriptional regulator, RpiR family n=3 Tax=Gammaproteobacteria RepID=A0KFB6_AERHH Length = 286 Score = 226 bits (576), Expect = 8e-58, Method: Composition-based stats. Identities = 101/284 (35%), Positives = 156/284 (54%), Gaps = 4/284 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L +I L+ S+ K+ADY+L P+ H SSQ+LA +A VSQSS+VKF QK+G+ Sbjct: 1 MLTLSKISNIRSQLSPSELKIADYILACPEQVTHFSSQELAQQADVSQSSIVKFTQKIGF 60 Query: 61 KGFPALKLALSEALASQPESPSVP---IHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 KGF A KLA+SE L + + ++N I DD L + +KL +E ++ T Sbjct: 61 KGFTAFKLAVSEDLGRKHAIKTDNVGDLYNGIGRDDDLETMAKKLAQEKINSIVETTQAL 120 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 L + ++ A R+ L GIG S L A++ +KL+KIG +D H ++ Q Sbjct: 121 DNATLARVLDVINQAGRVQLVGIGGSALTAKDLWYKLLKIGVTTLFAQDSHVQISIAQTL 180 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 P D+ L +SY+G R++ AA+ R G ++A+T F L+Q A L T+A+E Sbjct: 181 GPGDVQLVVSYSGASRDVLAAAELAKRNGATLIAVTSFRNTPLRQMADMVLDTVADENEL 240 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +SIS+ AQ +TD+LF+ L+Q+ + A I + + +L Sbjct: 241 RISSISSRTAQNTITDILFLGLVQRR-DEAWALIDGTRGAIDRL 283 >UniRef50_C6XNZ1 Transcriptional regulator, RpiR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XNZ1_HIRBI Length = 297 Score = 226 bits (576), Expect = 8e-58, Method: Composition-based stats. Identities = 82/278 (29%), Positives = 139/278 (50%), Gaps = 4/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + RIR R L S +ADY+L + +S +LA G S+ SV+ ++LG Sbjct: 20 NVISRIRIRKDSLGPSTSTIADYVLGHANAVVGMSVTELAEATGTSEGSVINLCRQLGLS 79 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LKL+L++ + P IH ++ D V +K+ + A+ TL++ + Sbjct: 80 GFQQLKLSLAQEVVR----PVQFIHEDLQPSDDTSTVCQKMFHAGSEALRETLSILDPDA 135 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V ++RSA R+ + GIG+S +A++ +++++IG +A V D H + + P+ Sbjct: 136 ISMAVDVIRSADRVEIYGIGSSAPIAEDAQYRMLRIGLDAKVVVDSHIQAISASRTGPNV 195 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L IS++G E A G K + IT F + LQ A LYT+A E S + Sbjct: 196 AVLTISHSGSTHETLAATRLARDAGAKTIIITNFASSPLQAYADVKLYTMARETKFRSEA 255 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +++ AQ + D+L AL D E A +R + ++ Sbjct: 256 MTSRIAQLCILDVLIAALALDDYERATTVLRQTSEVLS 293 >UniRef50_C5CIM2 Transcriptional regulator, RpiR family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CIM2_KOSOT Length = 283 Score = 226 bits (576), Expect = 8e-58, Method: Composition-based stats. Identities = 83/281 (29%), Positives = 135/281 (48%), Gaps = 4/281 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LL I +++KK+A +++ P ++S ++++ VS+ S+V+F QKLGY Sbjct: 6 NVLLTIETLKDSFTKTEKKIATFVVKNPQKVVYMSLTEVSDILKVSEGSIVRFCQKLGYT 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF K+AL+ S+ + D L + + + + + T SEE Sbjct: 66 GFHPFKIALA---VSENQESFSSSEFDFNSRD-LSSLKNYVAQRHIDVIKNTSEFISEEI 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L CV + +AR I+++G+GASG A + +K M+IG N D H D Sbjct: 122 LEACVEKILTARTILISGVGASGNTAHDAFYKFMRIGLNCKTSHDAHIQAMIASELREGD 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +LLAIS +G E+ AD + G V+AITG+ + L + A H L T E S + Sbjct: 182 VLLAISQSGSTLEIVDIADIARKGGATVIAITGYARSPLARFAHHVLLTPTRESPFESGA 241 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 + + AQ + +LLF A+ + E + I + V K + Sbjct: 242 LRSKIAQLYVLELLFTAVFHRMEEKGRKFIERTADSVAKWI 282 >UniRef50_B4EZY5 RpiR-family transcriptional regulator n=54 Tax=Gammaproteobacteria RepID=B4EZY5_PROMH Length = 295 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 72/279 (25%), Positives = 126/279 (45%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L + L + +++ADY+L P LS QL+ +++VV+F + LGYK Sbjct: 13 KILDTLGAMKNSLTRVSQRIADYILFHPTEVTQLSIAQLSQATKAGEATVVRFCRTLGYK 72 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF K+ L+ +A+ S + ++ D + +G KL + TLN+ ++ Sbjct: 73 GFQDFKMDLAIEMATSDNDESPILDAEVSHQDDIHTIGLKLQATINNVLSETLNLLDMQQ 132 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V L SA + + G+G+SG+ A++ KLM+IG+ AV + H + D Sbjct: 133 VQGAVNALLSANYVFICGVGSSGITAEDLKNKLMRIGYRVDAVTNNHFMYMQASLLKSGD 192 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS++G E A G +A+T + + + A H L + S Sbjct: 193 VAIGISHSGNSLETVHALKLAKEAGASTIALTHNLGSQIMEYADHHLINGNRQGKLQGDS 252 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 I AQ + DLL+ L+Q E E+ + +K+ Sbjct: 253 IGTKTAQLFVLDLLYTLLVQAKPETVKEQKLRTLNALKQ 291 >UniRef50_A9KIQ0 Transcriptional regulator, RpiR family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KIQ0_CLOPH Length = 284 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 60/277 (21%), Positives = 122/277 (44%), Gaps = 1/277 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RI Y +S+K +AD++ P+ + S LA GV ++V +F + L G Sbjct: 5 IFARIESSYSKFTKSEKIVADFVFENPEKVLYTSITDLAEICGVGDTTVFRFCKALKLNG 64 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + K+ L++ +A + I+ + DD ++ + +K + + AA+ T + E + Sbjct: 65 YQEFKMFLAQDIAVR-TGSDYTINGSVSQDDDIQTICKKALAVDIAALTETFEGLNFEAV 123 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V M+ +A ++ G+G+SG++A K M+I N + D H + S DL Sbjct: 124 TKVVDMISNANKVQFFGMGSSGVIALEAKMKFMRILPNVEHIADCHMQFMSAALLSSRDL 183 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + SY+G ++ A+ G KV++IT + + L + + + E + + Sbjct: 184 AIIFSYSGSTKDSIEIANLAKSNGCKVVSITRYVNSHLANISDVVIPCGSNEGPLDGGAS 243 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S Q + D+L++ + + + + Sbjct: 244 STSMVQFYILDILYLLYFTKHYHQSKLNKAKTTESIS 280 >UniRef50_A1HSQ6 Transcriptional regulator, RpiR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSQ6_9FIRM Length = 287 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 70/275 (25%), Positives = 134/275 (48%), Gaps = 4/275 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L RIR Y+ L ++++K+ADY+L HLS +LA +G +++++ + QK+GY+G+ Sbjct: 12 LPRIRSIYKALTKAEQKVADYILENAAKVVHLSITELAEVSGSAEATIFRLCQKVGYRGY 71 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 K+AL+ L + P+ ++ + D + ++ K+ + + TL + E L Sbjct: 72 QHFKIALAGDLYT----PAELVYKDVNAGDSMGVIARKVFHDINEGLQDTLKIIDEAALD 127 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 + V + ARRI G S ++A + ++ M+ G A D H + + P DL Sbjct: 128 KAVAAITKARRIDAYGSAGSAVIAADIEYRFMRFGIPVRAYADPHMQIISAALMQPGDLA 187 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 +A+S+TG R+L + + G V+AIT + + L + A L A+E S +++ Sbjct: 188 IAVSHTGANRDLLDSVAMAKQNGATVIAITSYMKSPLSKLADITLCGSAKETEYRSEAMA 247 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 A + D L++ ++ + E + + Sbjct: 248 ARLVHLAIVDALYVGVMLDRQDCIVENMEKIRKAI 282 >UniRef50_B6ITC5 HTH-type transcriptional regulator hexR, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6ITC5_RHOCS Length = 280 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 82/277 (29%), Positives = 135/277 (48%), Gaps = 5/277 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RIR GL +S++K+AD +L QP + S +LA++A VSQ +VV+F + +G G Sbjct: 1 MLDRIRSMRPGLRRSEQKIADIVLRQPHAVVNASVAELAHDADVSQPTVVRFCRSIGCSG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + KL L++ LA+ + +R DDP+ + KL+ + A+ N + + L Sbjct: 61 YQDFKLRLAQDLAAG----PARPEDAVRPDDPVAEIAAKLLNRSIGALTRLRNQLNPDAL 116 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V +L RR+ G GASG+VA + K ++G A D H P + Sbjct: 117 EAAVQVLTETRRLDCYGFGASGVVALDAQNKFFRLGLPVVAHTDSHVQAMAAALLGPQGV 176 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 LA+S +G REL + D L G +V+AIT + L RA+ L A E ++ + Sbjct: 177 ALAVSRSGRTRELLRSVDLALAGGARVIAITA-GGSPLAGRATVPLLVDAPEDSSPYTPM 235 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ A + D+L +A + + +R A ++ Sbjct: 236 TSRIAHLAVVDILQVATALRRGVHTGDPLRRPAAALR 272 >UniRef50_D1YCB1 Transcriptional regulator, RpiR family n=3 Tax=Propionibacterium acnes RepID=D1YCB1_PROAC Length = 290 Score = 222 bits (566), Expect = 9e-57, Method: Composition-based stats. Identities = 73/280 (26%), Positives = 125/280 (44%), Gaps = 2/280 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L RI + ++ ++A +L +PD S+ QLA AGVS ++VV+F + LG Sbjct: 4 SLLPRIDMARTTMRPAEAQVAAVILAKPDWTLAASTSQLAEAAGVSPATVVRFCRALGMS 63 Query: 62 GFPALKLALSEALASQ--PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ L+ L+ L+ + S I DD L + K+ + T Sbjct: 64 GYRELRTELARDLSRRTLELERSSVAEGTITLDDSLTQMITKIAFHEARTIENTARAVDA 123 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++L + + A R L G+G+SGLVA + + KL +IG +D H L Sbjct: 124 DELEAVASAISIAPRTALFGVGSSGLVASDLSEKLERIGLVCQHHQDTHMQLVHAALCKR 183 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 + L IS++G +E+ A + G +A+TG + + + A H L T A E + Sbjct: 184 PCVALGISFSGNTQEVVEALTVAQKHGATTVAMTGLPDSPVGRLADHVLVTSARETQVRA 243 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++S+ AQ + D LF + Q ++ + + V Sbjct: 244 GAMSSRMAQLAVVDFLFARVAQLCMDDLETLLSSTRTAVS 283 >UniRef50_A4TMJ1 RpiR-family transcriptional regulatory protein n=22 Tax=Gammaproteobacteria RepID=A4TMJ1_YERPP Length = 292 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 72/279 (25%), Positives = 129/279 (46%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L + L +S +++A Y+L QP LS L+ ++++++F + LGYK Sbjct: 12 KILDALGAMQNSLTRSAQRIAAYILAQPAQVTQLSIADLSALTQAGEATIIRFCRTLGYK 71 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF K+ L+ +A++ S + + ++ D +G KL + TLN+ S E Sbjct: 72 GFQDFKMDLAIEVATRHNSENSLLDADVQEGDDTLAIGSKLQSAINNVLSETLNLLSIES 131 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V +LR A RI + G+G+SG+ A++ KLM+IG A + H + +P D Sbjct: 132 VEQVVKVLRPADRICIFGVGSSGITAEDAKGKLMRIGLRVDAATNNHFMYMQASLMNPGD 191 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS++G E A G +A+T + + + A + L + S Sbjct: 192 VAIGISHSGTSAETVQALKLAKEAGATTVALTHNMGSRITELADYVLINGNRQGQLQGDS 251 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 I AQ + DL++ L++ D A R + V + Sbjct: 252 IGTKIAQLFVLDLIYALLVKADPAQAESIKRKTTQAVSQ 290 >UniRef50_C6D7K6 Transcriptional regulator, RpiR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D7K6_PAESJ Length = 284 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 69/277 (24%), Positives = 125/277 (45%), Gaps = 2/277 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + I Y ++KK ADY+L D ++S LA GV ++S+ +F + LG+K Sbjct: 5 SITSTIHSHYNRFTATEKKTADYILEHADAVVYMSITDLAEGCGVGEASIFRFCKALGFK 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ K+AL+ ++++ E P + +I+ D L K ++ N A+ T + + Sbjct: 65 GYQQFKIALAHSISADNEIPQLSGQVKIQ--DTLEDAVSKTLQSNINALNETFKLIQLDS 122 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 ++ + +L + R I G+G+S + A K M+I D H + D Sbjct: 123 INRAIDLLIRSDRFIFYGVGSSLMTAMEANNKFMRITNKTGCSVDSHQQAMSAALMGERD 182 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + ISY+G ++ A + G ++ IT F + L + L A E S Sbjct: 183 VAIIISYSGSTKDSIEVAKKAKERGAAIIVITRFVKSPLTSYSDITLLCGANEGPLQGGS 242 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +SA AQ L D+L++ ++ E + ++ A V Sbjct: 243 LSAKIAQLYLLDVLYVEYFKRTYEASIVNKENTSAAV 279 >UniRef50_C6J4B4 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J4B4_9BACL Length = 288 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 66/277 (23%), Positives = 130/277 (46%), Gaps = 1/277 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L++IR + L ++ +A+Y+L + HLS + LA + S +SV++F + +GY Sbjct: 7 NILIKIRDMKENLTPVERMVAEYILANTEDIPHLSIKSLAKLSKTSDASVLRFCKTMGYS 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + +++S AL S + + I+ D L + + + N ++ TL+V + Sbjct: 67 GYRSFIVSISAALGSMDDERKDQ-YTDIQPGDDLDTIIANISRNNMKSIEDTLSVLDRGE 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V LR++ RI+ GIGASGLV Q+ K +I + D H+ L D Sbjct: 126 VARAVKALRASNRIVFFGIGASGLVCQDGEQKFSRINKMCHSYTDGHSQLTAATLLGKGD 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + +S +G E+ + + +AIT + + L +A L E S + Sbjct: 186 VAIFVSNSGNTLEIIETLEIAKKNNATTVAITKYNKSELADKADILLGISTPEITMRSGA 245 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + + A + D+LF + + + + + + +++ Sbjct: 246 MGSRIAMLTIIDMLFAGVASAEYQNVKKYLTKTHSIL 282 >UniRef50_P44540 Uncharacterized HTH-type transcriptional regulator HI0143 n=33 Tax=Gammaproteobacteria RepID=Y143_HAEIN Length = 288 Score = 220 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 76/277 (27%), Positives = 138/277 (49%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L +I YQ L +S+KK+AD +L PD S ++A V ++++V+F + +G+K Sbjct: 6 NVLNKIGSLYQSLTKSEKKIADTILRSPDLVSQCSLSEIAKHLQVGEATLVRFCRTIGFK 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF KL LS LA++ + +I D + +KL M T+N+ ++ Sbjct: 66 GFSEFKLELSIELATKDNQDESILETEIMPSDDSLTIAQKLQTAVANVMEETINLLDLKQ 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L E V +L+ ARRI L G+G+SG+ A++ KLM+IGF A + H + + D Sbjct: 126 LEEVVKVLKKARRIFLFGVGSSGVTAEDAKNKLMRIGFQVDASGNNHFMYMQAALLTSSD 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + +S++G E + G +A+T + + + A + L ++ S Sbjct: 186 VAIGLSHSGYSAETAHTIKIAKQNGATTVALTHSLRSPVTEYADYVLVNGNKQGKLQGDS 245 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 I AQ + DL++ L+Q + ++A + + + ++ Sbjct: 246 IGTKIAQLFVLDLIYALLVQGEEDIAAQTKQKTLNVI 282 >UniRef50_Q1QSE2 Transcriptional regulator, RpiR family n=28 Tax=cellular organisms RepID=Q1QSE2_CHRSD Length = 289 Score = 220 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 66/280 (23%), Positives = 122/280 (43%), Gaps = 7/280 (2%) Query: 1 MN--GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 M+ +R+R + +S++K+A ++L P+ H+ LA EA VS+ +VV+F + L Sbjct: 1 MSSALFDEMRRRMEHFRRSEQKVARFVLRHPEDVIHMRIVDLATEAKVSEPTVVRFCRAL 60 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 G GF KL L++ LA+ + + D + + + + + Sbjct: 61 GCNGFQDFKLKLAQMLATGSQF----AQFSMNDSDSVAEFAHNIFDSTVGTLLSVRDRLD 116 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 L + VT L A R+ G GASG VA + K ++ + AA D H + + Sbjct: 117 HAALGKAVTALAMANRVEFYGFGASGAVAFDAQHKFFRLQISTAAYTDPHMQNMSAVTLT 176 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P D+++AIS TG R L + G V+ + + + L + LY E Sbjct: 177 PRDVVVAISQTGRTRALVASVRLARETGATVIGL-CPSDSPLASEVTLPLYIDVHEDTEI 235 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +S+ A ++ D+L + + + E+++ + + Sbjct: 236 YTPMSSRVAHLVIIDVLAVGVAKTRGPKLAEQLKSVKKSL 275 >UniRef50_C4FUK3 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FUK3_9FIRM Length = 280 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 72/281 (25%), Positives = 133/281 (47%), Gaps = 4/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + +I+ + + +++ + Y+L +++ +L +G S ++ +FA+K+GY Sbjct: 1 MSCITKIKSALESMTATEQMIGRYILEHRHEVLEMNTLELGWASGTSGAAWTRFAKKMGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG PALKL L++ + + + D L + K + T + E Sbjct: 61 KGLPALKLDLAQDRTDEEM---PEVDLFLDPRDTLGALLHKTQTILEQNLRRTYELIDEA 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + + M+ SA R+ L GIG SG+V + KL +I RD H L+A + P Sbjct: 118 VLAQAIDMMASAHRLFLCGIGGSGIVCMDLVHKLTRINRPVTYDRDTHVLMAQMAHCMPG 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITG-FTPNALQQRASHCLYTIAEEQATNS 239 D++L +SY+G +N A G K++AITG L A CL+ +E+ Sbjct: 178 DVVLVVSYSGNTHTVNQMAYLAKEQGAKIIAITGHNLKAPLASLADVCLFIPRDEKEIRL 237 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 S+++ ++TDLL+ + Q+ E + + +++K Sbjct: 238 GSVTSRDGSLIVTDLLYYGVAQRQFHATKEHLVKTRKMIRK 278 >UniRef50_C6J1X3 RpiR family transcriptional regulator n=2 Tax=Bacillales RepID=C6J1X3_9BACL Length = 289 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 76/277 (27%), Positives = 135/277 (48%), Gaps = 3/277 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L + + L+ ++KL +Y+L P T H +LAN G+S S+V +F + +KG Sbjct: 4 ILHAVSSHLETLSPQERKLGEYILESPATVIHQGITELANACGISPSTVTRFCKTFHFKG 63 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 FP K+ L+ LA +P + + I + L+ + E + + A++ T + +L Sbjct: 64 FPDFKMKLASELAHKP---AENHYQDIIAGNDLQKIVEAMEANHLASITDTTRLLDMNQL 120 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V L A+RI L G+ S +VAQ+F KL++IG N A D H + + + D+ Sbjct: 121 SRAVEALCRAKRIDLYGVATSSIVAQDFYQKLVRIGKNCTAFADSHMQITSASSLGEGDV 180 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 LAISY+G E A G L++T ++ N+L A L++ + E+ + Sbjct: 181 ALAISYSGETPETIDALRCAKDSGATTLSLTQYSSNSLASLADIALFSSSLEEGMRRGDM 240 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ AQ + D+LF ++ + + ++ S V+ Sbjct: 241 ASRIAQLHVIDILFTGMVSLEFQDFIPKLESSYQNVQ 277 >UniRef50_A5L3V2 Transcriptional regulator, RpiR family protein n=3 Tax=Vibrionales RepID=A5L3V2_9GAMM Length = 282 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 107/281 (38%), Positives = 161/281 (57%), Gaps = 1/281 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M G+ +++ L+ SD +A Y+L P + LSS +LA GVSQS++VKF+QK+GY Sbjct: 1 MKGIAKVKALLPKLSPSDSLVARYVLDHPQQVKQLSSPELAKAVGVSQSTIVKFSQKIGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGF +K+ L ++ S IH I D V EKL+ T ++ T+ +N E Sbjct: 61 KGFSEMKVKLYQSDMSYQPVSQRGIHGTITRKDSPDTVMEKLLASKTQSLERTVLLNEGE 120 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L +L A +I ++G+GAS LVA++FA+KLMKIG A D H +A + + + Sbjct: 121 QLSNAADLLHLANKIQISGVGASSLVAKDFAYKLMKIGHAVHAEPDAHIQIANAASLTEN 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L+AISY+G RE+ A KV+ I+ +P+AL + A L + A+E S+ Sbjct: 181 DVLVAISYSGKTREVVKVAQLARSKKAKVIVISQLSPSALDKYADIKLISAADENHIRSS 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 SI+A +Q +TDLLFIAL QQ E A + I S++ V + Sbjct: 241 SITARDSQFYITDLLFIALTQQ-EEQADQLIEQSKSAVAEF 280 >UniRef50_C0ZJF9 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZJF9_BREBN Length = 297 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 70/277 (25%), Positives = 132/277 (47%), Gaps = 4/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LL I+ +S++K+A +L Q D+ + S LA +AGV +++V++F +K+G+ Sbjct: 20 NTLLHIQSLLPSFTKSEQKVAHIVLQQTDSVIYSSVIDLAEKAGVGETTVLRFCRKIGFH 79 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ KLAL++ L + P +H ++ DD L ++ K+ N A+ T + E+ Sbjct: 80 GYQEFKLALAQELVN----PVKNLHGEVGEDDSLDIITHKVTATNQQAIGDTSALFQLEQ 135 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L CV +L+ A I G+G S + AQ+ + ++IG A + H P D Sbjct: 136 LERCVDLLQKANTIHFYGVGTSAVTAQDAKYTFLRIGLRVDAFNESHLQAMAAATLGPGD 195 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + +S +G ++ + + G + +T + + + A L T A+E S Sbjct: 196 VAIGLSVSGSTKDTIDSLKVAKQAGAACICLTHYRRSPITNVADITLLTAAQEGPLQGGS 255 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++A AQ + D++ + ++ E A + V Sbjct: 256 LAAKIAQLHVLDVISTTITMRNKEKALLYKERTAKAV 292 >UniRef50_P46118 HTH-type transcriptional regulator hexR n=302 Tax=Gammaproteobacteria RepID=HEXR_ECOLI Length = 289 Score = 219 bits (558), Expect = 8e-56, Method: Composition-based stats. Identities = 63/280 (22%), Positives = 127/280 (45%), Gaps = 5/280 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L +I+ + + L++S++K+A+ +L PD A H S +A EA VS+ +V +F + + Sbjct: 1 MNMLEKIQSQLEHLSKSERKVAEVILASPDNAIHSSIAAMALEANVSEPTVNRFCRSMDT 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GFP KL L+++LA+ + ++ + DD + K+ + A + + + Sbjct: 61 RGFPDFKLHLAQSLANG----TPYVNRNVNEDDSVESYTGKIFESAMATLDHVRHSLDKS 116 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ V +L A++I G+G+S VA + K + D+ + S Sbjct: 117 AINRAVDLLTQAKKIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNCSDG 176 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ IS+TG + L A V+A+T L + A+ + E Sbjct: 177 DVVVLISHTGRTKNLVELAQLARENDAMVIALTS-AGTPLAREATLAITLDVPEDTDIYM 235 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + AQ + D+L + + ++ + +K+ Sbjct: 236 PMVSRLAQLTVIDVLATGFTLRRGAKFRDNLKRVKEALKE 275 >UniRef50_C0Z7S3 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z7S3_BREBN Length = 288 Score = 218 bits (556), Expect = 1e-55, Method: Composition-based stats. Identities = 74/274 (27%), Positives = 146/274 (53%), Gaps = 3/274 (1%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 ++ L S++K+ADY+L P+ LS Q+LA +GVS++++++ A+ L KG+ L Sbjct: 12 LQAILDQLKPSERKVADYILAHPEDVVKLSVQKLAEYSGVSEATIIRLARSLNMKGYQEL 71 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 KL ++ L Q + + +I + + + + + N ++ TL+V S E++ + V Sbjct: 72 KLRVAGDLTKQT---ARGSYQEIMMEGSVESIMQAVSWNNIQSIQDTLSVLSNEEVKKAV 128 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 +L AR+I + G+GAS ++A + K +I A D HA L + + D+++ I Sbjct: 129 DVLSVARKIDVYGVGASAVIADDIRQKFSRINLWCEAYSDFHAQLTSAVTLTEKDVVIGI 188 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 SY+G ++ + E + G ++ +T F P+ + + A+ L+T + E++ S ++++ Sbjct: 189 SYSGQTEDIIQSLTEAKQQGATIITLTKFGPSPVAELANIRLFTSSVEKSIRSGAMASRI 248 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 AQ + D+LFI +I + E + S V + Sbjct: 249 AQLNVIDILFITMISRMQERVIPLLEKSRLAVSR 282 >UniRef50_C2L140 RpiR family transcriptional regulator n=6 Tax=Clostridiales RepID=C2L140_9FIRM Length = 285 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 65/279 (23%), Positives = 119/279 (42%), Gaps = 1/279 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +IR Y +++KK+ADY+L PD +S LA V +SV +F + + K Sbjct: 4 DFLTKIRSAYNQFTKAEKKVADYILQNPDQVLFMSISDLAETCKVGDTSVFRFCKTMNVK 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDP-LRLVGEKLIKENTAAMYATLNVNSEE 120 G+ K+ LS ++ + + D + + K+++E ++ T ++ Sbjct: 64 GYQEFKMTLSLSMRGNGKESKEGDGGNVSLQDNNIAELAGKVLEETIDSIKETHSLLDFN 123 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 K+ E + L A+RI+ G+GAS L A K +I + L + Sbjct: 124 KVTEAMNALSKAKRILFFGVGASMLTAMKAMNKFHRIEPKVYCSEMVSQQLMSAATMERG 183 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ + SY+G R++ A G V++IT F + L L A + Sbjct: 184 DVAVIFSYSGATRDIVEIAKLAKESGATVVSITRFQKSELTDYTDILLLCGANVGSLQKG 243 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S SA +Q L D+++ ++ E + + + +K Sbjct: 244 STSAEISQLFLVDIMYTEYYRRHYEYCNQILEKTTVAIK 282 >UniRef50_A9KMQ5 Transcriptional regulator, RpiR family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KMQ5_CLOPH Length = 285 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 127/277 (45%), Gaps = 1/277 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N ++ R L S++K+A Y L + + +LA E+GVSQ + ++F + +G+ Sbjct: 3 NIEIKTRSIMDSLNNSERKVATYFLNNIENIFSIPIARLAEESGVSQVTWIRFCKAIGFD 62 Query: 62 GFPALKLALSEALASQPESPSVPIHN-QIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G LK +L L S I+ L + + A+ T+ + + Sbjct: 63 GLKDLKKSLFMELNSSTSEGIDTSDFSDIKKHSTLEQMCNTIRNTTLQAVEDTIKLIDYD 122 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V++L A I L G+GAS LVA +F KL++I N DMH L + P+ Sbjct: 123 TLKKVVSILSKASCIKLFGVGASALVADDFCKKLLRINKNVNFSYDMHTQLVYGANARPE 182 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ + SY+G +E+ D + + IT +T + L A + +Y A E S Sbjct: 183 DVAVIFSYSGTTKEMLEIMDLAKKSNCPTIVITKYTKSPLVASADYSIYISAPEINYRSG 242 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 ++S+ AQ + DLLF +L ++ + + S + Sbjct: 243 AMSSRIAQLTIVDLLFTSLANKNYTSVEKYLEKSSEV 279 >UniRef50_C2D8M2 Possible transcriptional regulator n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D8M2_9ACTN Length = 291 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 72/274 (26%), Positives = 138/274 (50%), Gaps = 1/274 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N ++R+R+ L ++K +A Y+L P + LS + LA + VS ++VV+ + +G++ Sbjct: 3 NIIIRLRENIGFLNPAEKAVARYVLQCPHESNRLSVKALAARSFVSPAAVVRMCKSIGFE 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF K L+ LA++ + I+ +D L + +K+ +N ++Y L + E Sbjct: 63 GFKEFKTELTRELATEKLILPLD-TKDIKQNDTLESIIKKITLKNIHSLYDALRLIDPET 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V +L++ RI+L G+GAS + A++ K +++ D H L T + S+ D Sbjct: 122 IEKAVELLQACDRILLFGLGASLIAAKDANLKFLRVNKTCLINDDWHLQLITARNSTSQD 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + ISY+G E A+ + ++AIT + + + A LYT + E SA+ Sbjct: 182 VGIVISYSGQTAETLTCAEILKHNNTPIIAITRCIESPISKLADVLLYTTSNESLFRSAA 241 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 +S+ +Q + D+L+ A D E + + Sbjct: 242 MSSRISQLNIIDILYTAFAVSDYEKNFTYLSKTR 275 >UniRef50_C4G9W4 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G9W4_9FIRM Length = 280 Score = 217 bits (553), Expect = 3e-55, Method: Composition-based stats. Identities = 66/277 (23%), Positives = 124/277 (44%), Gaps = 6/277 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LL ++ Y L +++KK+ADY+ +S +LA E V+ +SV +F + +G K Sbjct: 5 NVLLSMQLSYNQLTRTEKKIADYVQKNAQKVLFMSITELAEECHVADASVHRFCRTIGAK 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ K+ LS + + + + ++++K + A+ T + +EK Sbjct: 65 GYQEFKMWLSINMGHEKGEEESEEEDGKEP------IFQQVLKSHLEAINETNQLLDKEK 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V ML AR+I+ G+G S A K + + D H + +D Sbjct: 119 VDQAVRMLTEARQIMFFGVGDSKTAAIEANNKFLHVTPKVMCAGDTHLQAMAASMMTEED 178 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 LL +SY+G ++ A G KV++IT F + L + + L ++E S Sbjct: 179 LLFVVSYSGSTKDTVEVAQIAKEAGAKVISITRFLKSPLTEFSDCVLICGSKEGPLEGGS 238 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + A +Q + D+L+ + + + A E + + V Sbjct: 239 MGAKLSQLHIIDILYQCYFKANGKKARENRQKTANAV 275 >UniRef50_B2TJ91 Transcriptional regulator, RpiR family n=1 Tax=Clostridium botulinum B str. Eklund 17B RepID=B2TJ91_CLOBB Length = 285 Score = 217 bits (552), Expect = 4e-55, Method: Composition-based stats. Identities = 66/275 (24%), Positives = 133/275 (48%), Gaps = 4/275 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L RI Y L ++KK+A Y+L P H S +LA + S+++V + KLGYKG+ Sbjct: 10 LERITNIYSELKGAEKKVAQYVLENPKNIIHFSITELAEVSKASEATVFRLCSKLGYKGY 69 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 LK+ L+ ++ P I+ +++ +D ++ K++ N ++ +TL +N E L Sbjct: 70 QDLKINLAGSVIE----PIDNIYEEVKENDDTYIIMRKIMSSNINSIESTLKINKTEDLD 125 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 + + ++ +A++I+ G+G S +A + K ++ G + A D H + ++ D + Sbjct: 126 KAIAIILNAKKIMFFGMGGSWTIANDAYHKFIRTGIDCVASCDSHWQVMFSSMANSGDAI 185 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 +A S +G +EL + + G K++AITG + L + + L E S ++ Sbjct: 186 IAFSNSGSNKELVENINLAKKRGIKIIAITGNEKSPLAKISDLHLIAYGNESMFRSEAME 245 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + M+ D L++ + + + + + Sbjct: 246 SRLTSLMIVDWLYVGVAIKRKDKTLGNLERIRNGI 280 >UniRef50_C0D6A5 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D6A5_9CLOT Length = 282 Score = 217 bits (552), Expect = 5e-55, Method: Composition-based stats. Identities = 65/276 (23%), Positives = 133/276 (48%), Gaps = 2/276 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L+++R Y+ L+ ++ ++ +Y+L P + +LA E+ S ++VV+ +K+ Sbjct: 6 MSVLIKLRD-YRNLSAAENQVREYILKYPKKVLEYTVYELAKESFTSPATVVRLCKKIDI 64 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQ-IRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 KGF LK+ L+E + + I +D + EK+ + T + +E Sbjct: 65 KGFARLKVLLAEETKYFQDMKLNLLDTTTIEKNDSPHAIIEKITNIAVKTIEETRVLVNE 124 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++ + +L+ A + G+GAS VA + +K M+IG N + S Sbjct: 125 KQFMQVARLLQKAVIVDFYGVGASSPVAIDAQYKFMRIGKNVITYQLYDRQYVQAVNSDA 184 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 + + ISY+G +E+ A + + G V+A+T N+L + A + L+ A+E S Sbjct: 185 SHVGIIISYSGETKEMLKIAGILQKNGTPVVAVTSSGENSLNRIADYNLFVTAKETVFRS 244 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 ++++ AQ + D+L+ D + + ++I+ + Sbjct: 245 GAMASRTAQLYIIDILYALYCSLDYDESIKKIQQTR 280 >UniRef50_C6L9A2 Transcriptional regulator, RpiR family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L9A2_9FIRM Length = 336 Score = 216 bits (551), Expect = 6e-55, Method: Composition-based stats. Identities = 65/261 (24%), Positives = 120/261 (45%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L I ++Y L +S KKLADY+ ++LS LA +GVS++++ +F +KLG Sbjct: 55 NILDLITEQYPTLTRSGKKLADYIFANTTETQYLSISALAENSGVSEATITRFCRKLGLS 114 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ KLA++++ + I D L + +KL+ N ++ T ++ E++ Sbjct: 115 GYNDFKLAIAKSDHVTDMGEPSGSPSTITSQDSLPDIFQKLLSANILSLTETFDLLDEKE 174 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V +L A + G G+S ++A + + D H + ++ ++P D Sbjct: 175 ISRAVDLLYGAHHVYCLGNGSSSVMAMEAWARFSTASTRFIHIADSHMQMLSIALATPQD 234 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++L SY+G R++ + + V+ +T F + A L E S S Sbjct: 235 VILFFSYSGATRDMEDIMNIAHKRKIPVILVTHFPKSQAAAFADVTLLCGYNESPLQSGS 294 Query: 242 ISACHAQGMLTDLLFIALIQQ 262 I+A Q ++ D LF + Sbjct: 295 IAARMGQMLIIDCLFHGFCLK 315 >UniRef50_A6LRF3 Transcriptional regulator, RpiR family n=2 Tax=Bacteria RepID=A6LRF3_CLOB8 Length = 294 Score = 216 bits (550), Expect = 8e-55, Method: Composition-based stats. Identities = 68/283 (24%), Positives = 135/283 (47%), Gaps = 4/283 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + +I+ Y L S+KK+ADY+LL + ++ +L+ + GVS+ ++++F + +G Sbjct: 6 SYEYKIKNMYNLLRSSEKKVADYVLLNGHSVSTMTLAELSRQVGVSEPTIIRFVKSIGCS 65 Query: 62 GFPALKLALSEALASQPESPSVP----IHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 G+ K+AL + + + I D+ + V K+I A+ TL + Sbjct: 66 GYSEFKMALMKEWGRESVDKQYDSKLLVELHIDRDEKIEDVPVKMIGLTIKALEDTLKII 125 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 K + + M+RS+ I + G+G SG VA + K ++IG A D + Sbjct: 126 DINKYKKAIEMIRSSNIIDVYGVGNSGSVASDIRNKFLRIGLECRAYSDSNIQQICASHL 185 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 + +DL + +S++G + A G + +A+T F A+ + A +T EE Sbjct: 186 TSNDLAIGVSHSGSTIDTVNALKIAKESGARTIALTNFKAPAISEYADITFFTGGEETTF 245 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 S ++ + +Q + D+L++ ++ D +L +R+ L+K+ Sbjct: 246 YSETMVSRISQLAIVDMLYMGILLDDYDLYTKRLEKINLLLKE 288 >UniRef50_A8RI47 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RI47_9CLOT Length = 285 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 72/275 (26%), Positives = 148/275 (53%), Gaps = 5/275 (1%) Query: 6 RIRQRYQGLAQ-SDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 R++ + + ++ K+ +++ + H+S A GVS++++V++AQKLGYKG+ Sbjct: 11 RVQSILPSINKKNEMKIYEFIEINRKEIIHMSVADAAEACGVSEAAIVRYAQKLGYKGYQ 70 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 A+K+++++ + P I+ Q+ D + + +K+ N ++ T +V S E + E Sbjct: 71 AMKISIAQDVIE----PGQQIYGQLSKGDTIPTIVDKIFDSNIQSLRDTSDVLSRENIDE 126 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 V ++ RR++ G+G SG VA + K +KIG+ A A D + + D+L+ Sbjct: 127 AVNLILGCRRLLFFGVGGSGCVAMDGQHKFLKIGYMAMAFTDSNLQAMAASVLTSRDVLV 186 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 A+S++G +++ +A D + G K +AIT + + + ++A LYT + E A NS ++S+ Sbjct: 187 AVSHSGASKDILMAMDIAKQSGAKTIAITNYGKSPIVEKADVVLYTSSNETAFNSDALSS 246 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 A+ + D+L+I + + + + I + + Sbjct: 247 RIAELTIIDMLYIGVSYKRYDESYANILKTRKALD 281 >UniRef50_C4KZ09 Transcriptional regulator, RpiR family n=85 Tax=Bacillales RepID=C4KZ09_EXISA Length = 301 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 74/280 (26%), Positives = 134/280 (47%), Gaps = 2/280 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +I + + +KK+ADY+L ++++++LA + VS++S+V+FA+ +G Sbjct: 22 SLLTKIDLAKEDMTAVEKKIADYILSHSTLIPNMTTKELAQKTDVSEASIVRFARVVGID 81 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F A KLAL + LA + + N ++ D +K+I N AA+ A + + Sbjct: 82 SFKAFKLALVKDLAVTETTLTDF--NVLQQKDTPYDSFQKVIHVNKAAIEACAEAMDKRE 139 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V + A R+I G+G S A + +K K+G+ A D H +L+ + D Sbjct: 140 LEHAVDLFARASRVIFYGVGGSSTAAIDAQYKFTKLGYAATTSPDFHYMLSLIPHLGKSD 199 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + +AIS +G +++ + V+AIT + L + A L T E AS Sbjct: 200 VFVAISTSGRTKDVLELVRFAKKKRVPVIAITNLDKSPLYREADVRLCTPNVESDFRIAS 259 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 I++ Q + D L++ L+ + E +R + + KL Sbjct: 260 IASRMTQLTIIDTLYMGLLHRKGEGLIDRYAEARDEMVKL 299 >UniRef50_UPI000197C448 transcriptional regulator n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C448 Length = 286 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 105/284 (36%), Positives = 162/284 (57%), Gaps = 3/284 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L I LA++ +K+A ++L P+ +LSSQQLA VSQS++VKF+QK+G Sbjct: 1 MTLLDIITYSLPRLAENQRKIAQFILENPENVLNLSSQQLAEILDVSQSAIVKFSQKVGV 60 Query: 61 KGFPALKLALSEALASQPES---PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 KG+PALKLALSE + Q P +HN+I DD L +V +KL E ++ T + Sbjct: 61 KGYPALKLALSEIIGRQQLKDGAPHSALHNRIAPDDNLMVVAQKLAMEKNHSITETTKLI 120 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 ++ V + ++R+ + GIG SGL A++ ++KL KIG D H +A Sbjct: 121 DFKQFERIVERIDQSQRVQIVGIGGSGLTAKDLSYKLQKIGITTLVESDHHVQIAAALTL 180 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 + D+ + IS+TG R+++ AA+ + G V+AIT + L Q A + L +IAEE Sbjct: 181 NTHDVQIVISFTGRRKDMLTAANIARKQGACVIAITRDCDSPLGQLADYVLESIAEEDEW 240 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+SIS+ AQ LTDL+F+AL+Q+ A + ++ ++ KL Sbjct: 241 RSSSISSRTAQNTLTDLIFMALLQRREAKAKSLVMNARVVINKL 284 >UniRef50_A6UCC0 Transcriptional regulator, RpiR family n=4 Tax=Proteobacteria RepID=A6UCC0_SINMW Length = 296 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 68/280 (24%), Positives = 112/280 (40%), Gaps = 5/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L IR R L +SD+K+A+ +L P + + + A AGVSQ +V++F +G + Sbjct: 16 NILEVIRLRRADLRKSDRKVAELVLADPKRVINATIAEAAEWAGVSQPTVIRFCASIGCQ 75 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ KL L+++LA H+ I D V K+ ++ N + Sbjct: 76 GYQDFKLRLAQSLALGM----SATHSVIDASDTPAQVSAKIFDYTITSLDWVRNHLDPVQ 131 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + L A RI G GASG+VA++ K G A D H + V P D Sbjct: 132 VSRAIDALSKASRIEFFGFGASGIVARDAQQKFPLFGVPCGAETDAHQQIMVVSMLKPGD 191 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS TG + A G +V+ I G L + L E Sbjct: 192 VAVVISNTGATLAIIETARRARESGCQVIGIVGS-DGPLVEFCDIVLMVETLENTNIYTP 250 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + A + D+L ++ + + + ++ L Sbjct: 251 TISRIAALTVIDILSTSVALRRGAEHVDLFTGMKRNLRYL 290 >UniRef50_A7VQA6 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQA6_9CLOT Length = 290 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 65/278 (23%), Positives = 131/278 (47%), Gaps = 4/278 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M RI+ Y L+ + KK+AD+++ PD A H++ QLA VS++SVV+F Q L Y Sbjct: 12 MGCTERIQATYSALSGASKKIADFVIDHPDQAVHMTVVQLAESCEVSEASVVRFCQCLQY 71 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF KL+L+ + S I I +D + EK+ A+ TL + + + Sbjct: 72 AGFYEFKLSLAAEIV----PASQMIQEDITVEDTEPTILEKVFAGEQQALQETLQMLNRQ 127 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 V + + ++ G + +AQ+ ++L++ G ++ D + L Sbjct: 128 DFISAVNHIAFSNKVEFFSCGNARPIAQDAHYRLLRTGIDSRIGIDDYDCLIHASMLRTG 187 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ + IS++G + +E + G + ITG + + + C+ + ++E S Sbjct: 188 DVAIGISHSGSTKNTIKMLEEAKKNGATTICITGMEKAPITRVSDICMVSHSKETMFRSM 247 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++++ AQ + D L +A+ + E + + + ++ ++ Sbjct: 248 AMASRIAQMAIIDALVVAVSFKRFERSKQYLTLTDKIL 285 >UniRef50_C9AZQ1 Phosphosugar isomerase transcriptional regulator n=2 Tax=Enterococcus casseliflavus RepID=C9AZQ1_ENTCA Length = 283 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 75/279 (26%), Positives = 132/279 (47%), Gaps = 3/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L+I+ Y+ L+ ++ +ADY+L P H S L+NE G++ S+ +F +KLGY Sbjct: 4 SIRLQIKTLYKDLSLKEQAIADYILENPSKVSHSSISDLSNELGIADSTFFQFTKKLGYN 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF K+A+ L + + ++ IH I+ D + +K+ N + T N+ EE Sbjct: 64 GFKDFKMAM---LMQENDFSAISIHENIQKSDNELTMAQKVFDSNMTTLTDTKNLLKEED 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L M+ ++R+ G+G S +VA + K ++ D H L +PDD Sbjct: 121 LKLAAAMINQSKRLFFFGVGGSEIVATDAYHKFLRSPITVFHSSDYHIQLMEASLLTPDD 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + IS+TG RE A G K++ IT + L + +I+EE S + Sbjct: 181 CGIFISHTGKSRETIELAQVAKNNGAKIIVITSHAASPLAKLGDVVFISISEETEFRSEA 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +++ AQ + D L++ L+ + + A + I + K Sbjct: 241 LASRIAQLSIMDSLYVILMFINRDKAQQSIAKIRRSISK 279 >UniRef50_D1ALE3 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1ALE3_SEBTE Length = 282 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 65/277 (23%), Positives = 136/277 (49%), Gaps = 2/277 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N +I + S+ K+ +Y+ P++ ++ ++L+N ++++++F +K G+K Sbjct: 7 NLFNKINSLKKSFTASETKVFNYIEKNPESVVRMNIRELSNAIDTGETTIIRFCKKTGFK 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ K++L +L+ + +S I I D+ + E + + + TL++ + E Sbjct: 67 GYNDFKISLISSLSKEKQSNKYKID--ILADENYNSIAEGIYNNSFNVLKDTLSLINNEI 124 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L +C+ ++ +A+ I GIG S L AQ+ +K ++IG + A+ D H S +D Sbjct: 125 LDKCINLINNAKHIEFIGIGHSNLTAQDAKYKFLRIGKSVASHSDPHLFKMAASISDRED 184 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++ IS TG RE+ + G K +AIT + + A + L E+ + S Sbjct: 185 VIIGISQTGETREVIDSLQSAKVRGAKTIAITNNDKTEITKYADYVLLNGFNEELLETGS 244 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 S +Q + +LL++ ++ ++ + A E + V Sbjct: 245 FSERISQLFIIELLYLGVLSKNKDKAMELKDLTIKAV 281 >UniRef50_B5I8T9 Sugar isomerase n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I8T9_9ACTO Length = 312 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 68/281 (24%), Positives = 122/281 (43%), Gaps = 2/281 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + IR LA S +K+ + +L P H S+ +L G SQ++V +F + +G + Sbjct: 23 DVTTLIRTELPRLAGSLRKVGELILEDPAAVTHCSAAELGRRTGTSQATVTRFCRAIGLE 82 Query: 62 GFPALKLALSEALASQP--ESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 + L + L++ + S I I DD L V + + + A+ T+ Sbjct: 83 SYQHLLIELAQERGRGEVSDWGSAEIGPDISPDDSLERVVQVVGSADLRAIQQTIERIDL 142 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L L ARRI + G+G SG VAQ +L +IG ++H + +P Sbjct: 143 DALERAAQALAKARRIDVYGVGGSGAVAQETETRLFRIGCQVRGWTEVHGAATSAALLTP 202 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+ + IS++G RE + G +AIT + L + A L + E + + Sbjct: 203 ADVAIGISHSGATRETLEPFEMAKERGATTIAITTDPRSPLAKAADIRLISATSETSFRT 262 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 SI H+ M+ D L++ + Q + A + ++ + + Sbjct: 263 GSIGGRHSVLMIVDCLYVRVGQVAYQRASASLALTDHITPQ 303 >UniRef50_UPI0001789683 transcriptional regulator, RpiR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789683 Length = 289 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 76/280 (27%), Positives = 141/280 (50%), Gaps = 3/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LL I Y L +++KK+ADY+ P+ + L+ +AGV ++SV++F +KLG++ Sbjct: 12 NTLLMISSIYSSLTKTEKKVADYVKGFPEETVLATVTDLSEKAGVGETSVIRFCRKLGFR 71 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF KL++++ L +P + I D L V KL ++ + TL++ + + Sbjct: 72 GFHEFKLSVAQDLVDRP---PSVVDTSIDEQDDLMTVARKLTMQHEILLKNTLDLVNADN 128 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V L +A ++ + G+G+SG+ A + ++LM++G N A RD H + + D Sbjct: 129 LRMAVDKLLAANKVYVYGVGSSGITALDLHYQLMRLGLNVEAHRDSHIIAMSASLVKKGD 188 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L+ AIS +G R+L A E + G V+ +TG + + A L + E T + Sbjct: 189 LVFAISTSGSTRDLVDAVKEAKKNGADVICLTGHLRSPIATYADTVLLVSSREMPTEGGA 248 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++ Q + ++L L + + + + + ++ KL Sbjct: 249 LATKFMQTYMLNILTTLLTMKKEDASESLKKTASSVADKL 288 >UniRef50_B0N1V0 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0N1V0_9FIRM Length = 277 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 74/280 (26%), Positives = 139/280 (49%), Gaps = 4/280 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN +I++ ++K +A Y+L S+Q L + G S +++++F++KLGY Sbjct: 1 MNSYAKIKEAQSSYTSTEKVIAKYILENAADVLKCSAQSLGEKTGTSAAAIIRFSKKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK++L+++ +P I I +D + + +K + N + T + Sbjct: 61 NGFSELKMSLAQS----KRAPEEKIDFIIDENDDIVTLADKCCRLNMNTVLKTYQLIDTN 116 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L + L +A I L G+G S +VAQ+ KL +IG +D+H L ++ + + Sbjct: 117 QLDNAIKKLIAANTIYLFGVGGSAIVAQDVEQKLTRIGKKVIYNKDLHVQLTFSESMNKE 176 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D L ISY+G + L A + +++IT F PN L + + L EE+ Sbjct: 177 DAALFISYSGTTKGLVEIAKMIKNKNVPIISITQFKPNPLSKLSDIILQVPNEEKEIRMG 236 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +IS+ + ++TDLL+ + + DL +++ ++ +V K Sbjct: 237 AISSRISSLVMTDLLYYGVFKNDLTGNKDKLIETKRIVSK 276 >UniRef50_Q9CKN4 Putative uncharacterized protein n=1 Tax=Pasteurella multocida RepID=Q9CKN4_PASMU Length = 286 Score = 214 bits (544), Expect = 3e-54, Method: Composition-based stats. Identities = 109/283 (38%), Positives = 167/283 (59%), Gaps = 3/283 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L++++ Y L+ +++++AD++L P + SS+ LAN+ VSQS+++KF+QKLG Sbjct: 1 MGFLIKLKHTYPSLSPNEQRIADFILKHPHEVKSSSSKALANQIAVSQSAIIKFSQKLGA 60 Query: 61 KGFPALKLALSEALASQPESPSV--PIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 F KLA+SEAL Q +H+ I D L + EKL E A+ +L++N+ Sbjct: 61 DKFSDFKLAISEALIRQETQSEPRVHLHDSITDKDDLSEIAEKLFVEKQQALKESLSLNA 120 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 + V L A+RI L GIG S LVA++F +KL KIG D HA LA Q+ + Sbjct: 121 IPYVARVVEQLMQAKRIQLMGIGNSALVAKDFFYKLTKIGLPVVTETDTHASLAMSQSLT 180 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P D+L IS++G RE+ LAA+ K++A+T T N L + A + LY++A+E Sbjct: 181 PQDILFLISFSGRHREILLAAENAKARQIKIIALTALTTNPLHELADYLLYSVADESTFR 240 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+SI++ AQ +TDLLF+ ++QQ E A + I S AL+ +L Sbjct: 241 SSSIASRTAQHAITDLLFMGILQQ-KEHANDLILESRALIGQL 282 >UniRef50_A8RRF4 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A8RRF4_9CLOT Length = 289 Score = 213 bits (543), Expect = 5e-54, Method: Composition-based stats. Identities = 70/273 (25%), Positives = 139/273 (50%), Gaps = 1/273 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L+RI++ + ++K + +L P+ A S +QLA++ S +++V+ +K+G+ Sbjct: 3 SVLVRIQEYSAQASGAEKGVLRFLRENPEEAAGYSIKQLADKTFSSAATIVRLCRKMGFD 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ L+ +L A + + P+ +I+ DD L + K+ +N ++ T + + Sbjct: 63 GYKELQKSLLYESALR-RESTRPMEQEIKKDDSLEELVNKVTYKNIVSLDNTRKLVDLDI 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L++CV +L ++ + L GIG+S LVA++ KL+++ D HA L + D Sbjct: 122 LNQCVELLDRSQTVYLFGIGSSLLVARDMYLKLLRVNKACVICDDWHAQLLQARNIRSCD 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L L +SY+G+ E+ A E V+ I+ F + L + A + L A E S + Sbjct: 182 LALIVSYSGLTEEMITCAREARLREAPVITISRFEQSPLVRLADYNLAVAATELIFRSGA 241 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 +S+ +Q + D+L+ A + + + E+ R + Sbjct: 242 MSSRISQLNMIDILYTAYVHKRYDECMEQFRKT 274 >UniRef50_UPI0001693BD8 YbbH n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001693BD8 Length = 265 Score = 213 bits (543), Expect = 5e-54, Method: Composition-based stats. Identities = 70/260 (26%), Positives = 127/260 (48%), Gaps = 3/260 (1%) Query: 21 LADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPES 80 LA Y++ + +LA + S +++ +F + L ++GF KL LS LA QP Sbjct: 2 LASYIVEHAHEVVSMGITELAERSQTSPATISRFCKSLHFQGFTDFKLKLSGELAKQPSE 61 Query: 81 PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGI 140 S + I +PL + + + ++ T +N ++L + V+ L++AR+I L G+ Sbjct: 62 HS---YQDIVAGNPLSEIVSAIEANHLRSIADTTQLNDIKQLQQAVSALKNARQIDLYGV 118 Query: 141 GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAAD 200 SG+VAQ+F KL++IG + D H + + +D++ AISY+G E A Sbjct: 119 ATSGIVAQDFYQKLVRIGKRTSVFSDPHMQITSASNLGENDVVFAISYSGDTEETIQALR 178 Query: 201 EMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALI 260 G +++T F N L + L+ E+ +++ AQ + D+LF +L+ Sbjct: 179 CAKERGAVTISLTKFGTNPLANLSDIRLFASTLEEGMRRGDMASRIAQLHVIDILFTSLV 238 Query: 261 QQDLELAPERIRHSEALVKK 280 ++ + R+ S LV+K Sbjct: 239 SEEFDELIPRLERSYQLVRK 258 >UniRef50_C8NZR0 RpiR family transcriptional regulator n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZR0_ERYRH Length = 280 Score = 212 bits (541), Expect = 8e-54, Method: Composition-based stats. Identities = 72/279 (25%), Positives = 140/279 (50%), Gaps = 4/279 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + RI++ ++K++A+Y+L D + SSQ A E S +++V+F++K+GY Sbjct: 1 MSCIYRIKENMHTYTDTEKRIAEYILENKDEVVNFSSQHFAKEINSSAAAIVRFSKKIGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+ L+ + + +S I+ +D + + K N T + + E Sbjct: 61 NGFTHLKVELARDHSEEEQSFDKL----IKEEDTIETMVRKSHYSNHRTFDNTYKLLNLE 116 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + + +ARRI L GIG SG+V Q+ K ++I + D H ++++ + + Sbjct: 117 VLDASIAAISNARRIYLLGIGGSGIVCQDLYHKFVRIDADVVYFDDFHLEMSSLTHITEN 176 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ +A+SY+G RE+ +A G +AIT N L + + + EE Sbjct: 177 DVTIALSYSGQTREIIMAQKLAQDKGATTIAITQVGRNELAKNSDFVINIPKEESEVRLG 236 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 SI++ + ++DLL++ + + ++E +I ++ +K Sbjct: 237 SIASRFSMLAISDLLYLGVAKNNIEETRRKIVNTRDTIK 275 >UniRef50_A6LVH8 Transcriptional regulator, RpiR family n=8 Tax=Firmicutes RepID=A6LVH8_CLOB8 Length = 282 Score = 212 bits (540), Expect = 9e-54, Method: Composition-based stats. Identities = 70/277 (25%), Positives = 135/277 (48%), Gaps = 3/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L+I+ Y GL+ ++ +ADY+L P + H S L++E V+ S++ +FA+KLGY Sbjct: 4 SVRLKIKSLYNGLSAKEQNIADYILENPISVAHNSISYLSDELNVADSTLFQFAKKLGYS 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF K+A+ L + + IH +I DD + +K+ N + T + + Sbjct: 64 GFKEFKMAI---LIEENNFSTTSIHEKIEIDDNELTMAQKVFDSNIKTLTNTKKILGLDD 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + ++ ++ + G+G SG++A++ K ++ + D H L +P D Sbjct: 121 LKKAAEIISNSNLLYFFGVGGSGILAEDAYHKFLRSPAHVRHSTDYHIQLMEASLLTPQD 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + IS+TG +E A+ + G KV+ IT + L + +I+EE +S + Sbjct: 181 CAICISHTGKSKETIRIAEIVKEAGAKVIVITSHASSPLAKIGDVVFISISEEIEFHSEA 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +S+ +Q + D L++ L+ + E + E + + Sbjct: 241 LSSRISQLSILDSLYVILMFMNKEKSKEALSKVRRTI 277 >UniRef50_A6LUR0 Transcriptional regulator, RpiR family n=2 Tax=Clostridium RepID=A6LUR0_CLOB8 Length = 281 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 72/282 (25%), Positives = 137/282 (48%), Gaps = 2/282 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L I+Q Y +K +ADYL+ + +S++ +A S +VV+FA+K+G+ Sbjct: 1 MNVLQYIKQNYDSFTDREKLIADYLIETKERIISMSARDIAEATKTSAPTVVRFAKKIGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 LKL LS ++ + E+ ++ + + + + + M T+++ EE Sbjct: 61 NTLNELKLKLSINISKEEEAGAIQFQYLDNDLGT-KNIIYGIKQSVDSIMEQTVSLLDEE 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + + +L SA+ I + +G SGLV Q+F +KL ++ D H + + Sbjct: 120 CLDKAIELLISAKNIYIFSVGVSGLVGQDFYYKLSRMNKRCICNTDTHLQITSSVLLEEG 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAIT-GFTPNALQQRASHCLYTIAEEQATNS 239 D+ LAISY+G +E+ V+AIT N + + + A E++ Sbjct: 180 DVALAISYSGETKEVIKCVKNARNRKVPVIAITKASVNNTIADISDIVIRIPAVEKSIRE 239 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +IS+ +Q + D+L+I +I+ +++ E++ + VK+L Sbjct: 240 GAISSRISQLAIIDMLYIGMIRNNIKEVEEKLISTRKAVKEL 281 >UniRef50_A8RWE9 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RWE9_9CLOT Length = 301 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 71/276 (25%), Positives = 132/276 (47%), Gaps = 4/276 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R+ ++ L++ + + A+Y+ + + S LA AG S+++V + KLGY+G Sbjct: 25 LYDRVEEKRGSLSKKELETAEYMAAHQEQLIYSSITDLAERAGSSEATVTRVCGKLGYRG 84 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F ALK+ ++ L + P IH + D P ++ EK+ + T + + + Sbjct: 85 FQALKVGVARELTT----PQEKIHENLEADSPAEVIIEKIFSSAIETLSMTQKSINVKAV 140 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + L ARRII+ G G S +A + K +++ NA A D H + V + + D+ Sbjct: 141 AASIDALCRARRIIIIGNGNSASIAADAQHKFLRLDLNAHAYTDDHMQMIAVSSMTDQDV 200 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 LLAISY+G R + AA + G V+++T + + + A CL T ++E + +I Sbjct: 201 LLAISYSGSSRNVVEAAHQAKEQGATVISLTNEGSSPVSKLADICLNTYSQETRYRTYAI 260 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 S+ A+ + D ++ + + + A E + Sbjct: 261 SSRMAELTIIDTIYTGVALRLGDKAIANFEALERAL 296 >UniRef50_C1PDB4 Transcriptional regulator, RpiR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PDB4_BACCO Length = 283 Score = 212 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 70/275 (25%), Positives = 139/275 (50%), Gaps = 4/275 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L RI+ Y + ++K+ADY+L P H + Q+A++ V+ ++V +F +++G+ GF Sbjct: 11 LHRIQTMYSEFSAKERKIADYILENPQRLVHSTINQVADQLLVADATVFRFCKRIGFSGF 70 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 ALK+AL+ A P + ++ D + V K+ + N + T++ +++ LH Sbjct: 71 QALKIALAAEAAR----PGKNMDEAVKDTDNEKAVAIKVFESNIETLQDTIHTLNQKHLH 126 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 E V + A+ I+ G G++ ++A + K ++ A D H L + + +D+ Sbjct: 127 EAVEWICRAKHIVFYGCGSASVIALDALEKFLQTDLAVTAYTDPHLQLLSAARCTKEDVA 186 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + IS+ G +E+ + + G K +AIT F + L Q+A L+T+++E +S S Sbjct: 187 VFISHAGADKEMLKLLQAVQKTGAKTIAITQFAKSPLSQKADVPLFTVSQEADFRFSSFS 246 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 A Q L D L++ ++ + + E ++ + Sbjct: 247 ARIVQLSLIDTLYVNVMLRYKDTNEEILQKGKETY 281 >UniRef50_B8KWX3 Bifunctional protein glk n=3 Tax=unclassified Gammaproteobacteria RepID=B8KWX3_9GAMM Length = 337 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 69/278 (24%), Positives = 112/278 (40%), Gaps = 5/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L I Q GL +S+ K+A +L PD A +S LA+ AGVS+ SV +F ++ G Sbjct: 52 NLLEDINQSLPGLNKSEVKVAQAILSDPDAATRMSIASLASRAGVSEPSVNRFCKRFGAS 111 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GFP KL L+ ++ S S + D + KL +A+ A Sbjct: 112 GFPDFKLRLATSMVSGVRYISRA----VEFSDDIDTYPGKLFDNAISALVAAKEQLPTGD 167 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V L ARRI G+G S V ++ K + +D A S D Sbjct: 168 IARAVDFLAQARRIHFFGLGTSAAVTKDAEHKFFRFNVPVTNHQDPLMQRMLAAAGSVGD 227 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + IS+TG R L A+ + V+++T + L Q + + E Sbjct: 228 VFFIISHTGRTRALVEVAELARQTEATVVSLTA-PQSPLAQESDCAITLTIGENTEEYLP 286 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +++ Q + D+L + + E + + +K Sbjct: 287 MTSRLVQLAVIDVLATGVTLRRGERFLPHLARIKDSLK 324 >UniRef50_C4DDH7 Transcriptional regulator, RpiR family n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DDH7_9ACTO Length = 342 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 72/280 (25%), Positives = 123/280 (43%), Gaps = 2/280 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L+R+R GL S++++A+ +L P L+ +LA S ++VV+F Q++GY Sbjct: 12 VLVRVRAALPGLRPSERRIAEAILDDPHATAGLTVAELAAACDTSTTTVVRFYQRIGYGR 71 Query: 63 FPALKLALSEALASQP--ESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + L+L L+ + + I DD + + K+ T ++ T + + Sbjct: 72 YKDLRLDLTREATREQLETANLPAASGDIDRDDTIDDIIAKVAANETLSIADTAEILDRD 131 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L V + +ARR+ G+GASG V + KL +IG A + D A + Sbjct: 132 ALARAVDCVLNARRVDSFGVGASGFVGLDLQQKLTRIGRTALSWLDTDAAWSAAVTLDEQ 191 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 + +AIS+TG G +AIT AL + A L T A E S Sbjct: 192 CVAIAISHTGTTAATVEFLAMAAAEGATTIAITNHDNTALAETADVVLTTAARETRFRSG 251 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ + AQ M+ D LF + + + + +R + A V + Sbjct: 252 ALGSRIAQLMVVDCLFTGVARASYDASMSALRKTYAAVHR 291 >UniRef50_B1YJ20 Transcriptional regulator, RpiR family n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YJ20_EXIS2 Length = 284 Score = 210 bits (535), Expect = 4e-53, Method: Composition-based stats. Identities = 81/280 (28%), Positives = 139/280 (49%), Gaps = 5/280 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +I ++ L S +K+AD++L + ++ LA E+G S ++VV+F + LG KG Sbjct: 5 IFSQISAVHEELPSSSRKVADFVLAHMNEIAGMTIHHLAEESGTSAAAVVRFCRALGLKG 64 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 +P L++ +S A + ++ I ++ + EK + + A+ T SE+++ Sbjct: 65 YPELRMRISADTART----DLKGYHDIEKNERPADLVEKTVSNSIQALQDTAKQLSEDRI 120 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 E +L AR I GIGAS +VA + A K ++G D H + + +S DD+ Sbjct: 121 AEAADVLDQARAIYFYGIGASNVVALDAAQKWTRVGKLTIQESDQHLVATILANASQDDV 180 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSAS 241 AISY+G E+ G KV+++T F N + Q A L+T A E SA+ Sbjct: 181 FFAISYSGETEEVVELIRLAKIRGLKVISLTRFGDNRVSQLADIALWTSRAPEAPLRSAA 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +S+ AQ D+LF++ + ER++++ VK L Sbjct: 241 LSSRLAQLFAIDVLFLSYAAVHYDDTIERLQYTRESVKML 280 >UniRef50_B6GA31 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GA31_9ACTN Length = 281 Score = 210 bits (535), Expect = 4e-53, Method: Composition-based stats. Identities = 82/273 (30%), Positives = 142/273 (52%), Gaps = 2/273 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L+R++Q + ++++L + +L P++ LS +LA A VS S++ + +KLG K Sbjct: 3 SLLVRLKQYRDNASPAERELIERILDDPESISGLSIHELAAYAFVSPSTITRLCKKLGLK 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + L LA ES S I + + D R EK+ ++N ++ +N E Sbjct: 63 GYKEFQHLLIYDLALLRESSSSKIED-LAPTDTSRQTIEKVTRDNIDSLRLVEKLNDPET 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 CV ++ AR I L G+GAS L A++ +KL++IG + + D H L S P+D Sbjct: 122 YEACVDLMSDARTINLFGMGASLLSARDMHYKLLRIGVSCNLIDDWHGQLLCASNSGPED 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT-PNALQQRASHCLYTIAEEQATNSA 240 L +AISY+G+ E+N+ GGKV+AITG + L ++A L + E SA Sbjct: 182 LSIAISYSGLTEEVNVCVGRARERGGKVIAITGSAFDSKLARQADEVLLVGSTEPLMRSA 241 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRH 273 ++++ Q + D+LF + + ++ E + Sbjct: 242 AMASRIGQLGVIDILFKSFVNRNYARFSEVLEQ 274 >UniRef50_P26833 Uncharacterized HTH-type transcriptional regulator CPE0189 n=15 Tax=Clostridiales RepID=Y189_CLOPE Length = 279 Score = 210 bits (534), Expect = 5e-53, Method: Composition-based stats. Identities = 67/278 (24%), Positives = 142/278 (51%), Gaps = 2/278 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L ++ +S+K L +Y+ D + S +A E+GV ++++ +F +KLG+ Sbjct: 1 MGILEQLENPKFKATKSEKTLIEYIKSDLDNIIYKSISIIAKESGVGEATITRFTKKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF K+ L++ ++++ + I+ + D+ + K++K + + T+ + Sbjct: 61 NGFQDFKVTLAKEISNKKN--TSIINLHVHRDESVTETANKMLKSSINILEQTVKQIDLD 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + +C ++ +A+R+ GIG SG+ A + +K M+IGF V D H ++ ++ D Sbjct: 119 LMCKCRDLIMNAKRVYFIGIGYSGIAATDINYKFMRIGFTTVPVTDSHTMVIMSSITNDD 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++AIS +G +E+ + G K++ +T + N L++ + + L + E + Sbjct: 179 DVIVAISNSGTTKEVIKTVKQAKENGTKIITLTEDSDNPLRKLSDYELTYTSAETIFETG 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 SIS+ Q L DLL+ +I++ A E+ + + + Sbjct: 239 SISSKIPQIFLLDLLYTEVIKEMFSEAVEKKIKTTSAI 276 >UniRef50_A8F3D9 Transcriptional regulator, RpiR family n=1 Tax=Thermotoga lettingae TMO RepID=A8F3D9_THELT Length = 276 Score = 209 bits (532), Expect = 8e-53, Method: Composition-based stats. Identities = 65/283 (22%), Positives = 133/283 (46%), Gaps = 13/283 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + I+ + + + +LA +++ PD H+S ++ +E + Q +VV+F QKLG+ Sbjct: 4 DVQTIIKANQKQFTKKENELAQFVIDHPDEVIHMSITEIVDELRIGQGTVVRFCQKLGFS 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN--SE 119 GF K+AL+++L Q + + + + +++ A+ T + +E Sbjct: 64 GFHPFKIALAKSLGRQE-----------EASEGSKDMLAMVKEDHIKAIEETSKLLKLNE 112 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + +++C + + RR+ L G+GASG+ A + +K M+IG + + D H ++ + Sbjct: 113 KVVYQCAEKISNCRRLYLLGVGASGVTALDAYYKFMRIGVDVKYMLDPHFQAMSLSGCNE 172 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D ++A S +G + A + V+A+TG+ + L A L T E S Sbjct: 173 KDCVVAFSQSGSTAVVVDMAQIAKQNKACVIAVTGYNKSPLTFYADFVLLTAVRENPFQS 232 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 +I + AQ + ++LF + A + + + V+K + Sbjct: 233 GAIRSKIAQLHVLEVLFEQTKLLLADKAKQNVDRTARSVEKWI 275 >UniRef50_Q02VU4 Transcriptional regulator n=4 Tax=Lactococcus lactis RepID=Q02VU4_LACLS Length = 282 Score = 209 bits (532), Expect = 9e-53, Method: Composition-based stats. Identities = 65/281 (23%), Positives = 135/281 (48%), Gaps = 6/281 (2%) Query: 1 MN--GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 M+ + RIR Y L++SD+ ++DYL+ D+A LS Q+ A + VS +++ +F++K+ Sbjct: 1 MSRTLISRIRSYYDNLSKSDQAISDYLIANIDSAAMLSIQEFAQKTQVSTATISRFSKKI 60 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 G+ F LKLA+ + + +++ D + + K N +++ +TLN+ S Sbjct: 61 GFNSFQELKLAI----HATDSTRDDEFFSELSPTDDYKEILTKNFNGNISSLNSTLNLIS 116 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 +L + + +L A G+G S VA K +++ + +D H + Sbjct: 117 NRQLDQTMEILLKANTCGFFGLGGSNAVALIAFHKFLRMPLHCVYHQDFHFQQMQAAKLT 176 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 +D IS+TG ++ + + G ++A+T F + L + A L +I+EE + Sbjct: 177 SEDCAFVISHTGKNKDTMHLVEILKSRGVPIIALTSFASSPLAKAADVALISISEEISFR 236 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++++ +Q L D LF+ + +++ + ++ Sbjct: 237 PEAVASTVSQISLLDALFMMYGMKMKDVSEGTLSEIRKVIS 277 >UniRef50_Q3JNN8 Transcriptional regulator, RpiR family n=54 Tax=Burkholderiaceae RepID=Q3JNN8_BURP1 Length = 339 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 71/278 (25%), Positives = 130/278 (46%), Gaps = 5/278 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RI L S++KLAD++L P LS +LA AG SQ ++ +F Q LG G Sbjct: 8 MLPRIETIRAQLRPSERKLADFVLAAPREVLDLSMTELAARAGASQPTIARFCQALGCSG 67 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F K+ L++++A ++ + D+ + K+ A+ N S + Sbjct: 68 FREFKIRLAQSVA----PGVASVYRDVEPDERAPGIIGKVFDRTIGALIEVRNSLSATSV 123 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 E + +L A RI G G SG+ AQ+ K ++G + A D H + +D+ Sbjct: 124 AEAIELLTRASRIEFYGAGGSGIAAQDIQHKFFRLGVPSVAYSDPHTFSMSAALLGANDV 183 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++AIS TG R++ AA L G KV++IT + + L Q ++ L + E+ + + Sbjct: 184 VVAISNTGRTRDIVDAARAALACGAKVISIT-HSHSPLAQLSTVSLASNVAEETDVFSPM 242 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ + + D+L + + + +R+ ++ + + Sbjct: 243 TSRMSHLAIGDILAVGVALRRGPELVDRLGRAKEAITR 280 >UniRef50_C3WE65 Transcriptional regulator n=5 Tax=Fusobacterium RepID=C3WE65_FUSMR Length = 284 Score = 209 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 89/266 (33%), Positives = 152/266 (57%), Gaps = 1/266 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L++I ++ ++KK+ +Y+L PD + L++ +LAN SQ++VV+FA++LG+ Sbjct: 1 MGVLIKINSMLDNISSTEKKVGEYILENPDKIKDLNTYELANITKTSQATVVRFAKRLGF 60 Query: 61 KGFPALKLALSEALASQP-ESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 KGFPA KLALS+ L ++ ES +H +I+ DD ++G K+ EN A+ T V Sbjct: 61 KGFPAFKLALSQDLGNRKAESHVNIMHEEIKPDDSFEIIGRKISNENITAISDTYEVTDF 120 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 +L + V ML AR+I+L GIG SG+VA++F +KL+++G +A D H L+ + Sbjct: 121 TELEKAVVMLSKARKIMLAGIGFSGIVAKDFYYKLLELGKHAMIEVDTHMQLSCLSTMGE 180 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD+L IS++G E+ G V+A+T PN ++ A L T+ S Sbjct: 181 DDVLFVISHSGKTMEMYNVVKVAKSKGITVIAMTSIAPNPIKDLADIRLNTVEMNSNFRS 240 Query: 240 ASISACHAQGMLTDLLFIALIQQDLE 265 ++S +Q + D+L++ ++ ++ Sbjct: 241 TALSPRISQLTVIDMLYVKMMLENKN 266 >UniRef50_A8FIY5 Possible RpiR family transcriptional regulator n=4 Tax=Firmicutes RepID=A8FIY5_BACP2 Length = 286 Score = 209 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 64/279 (22%), Positives = 139/279 (49%), Gaps = 3/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N IR + L+ + KK+A+Y+L P S LA+E S++++ +F +K+GY+ Sbjct: 8 NIFSHIRTTFHSLSPTQKKIANYILENPQKVVLHSISALASECNTSETTIFRFLRKIGYE 67 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + ++ +++ +A+ I+ +I D + + K+I+ T ++ ++ + Sbjct: 68 SYQVFRVHVAQDIATNT---PQSIYGEIEASDSVADIKHKVIELTTNSIQDMKHIVEDHA 124 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + + ++ A + + G GAS +A + K +++GF+ + D H + ++ D Sbjct: 125 VTQFIEQMKQAHKTVFFGAGASSFIAGDAYHKFLQLGFDVSLCSDPHMMNMIATHATEHD 184 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++AIS++G RE+ A G K+ +IT + + L +R+ L + + E S S Sbjct: 185 FIVAISHSGESREILDAVQFAKEKGAKIASITSYPKSELAKRSDFHLLSSSRETTYRSDS 244 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + Q ++ D+L++A + + A E ++ S V K Sbjct: 245 MISRINQLVIIDVLYVAAVLELGSNAIENVKRSRLAVAK 283 >UniRef50_C2D3P4 RpiR family transcriptional regulator (Fragment) n=3 Tax=Lactobacillus RepID=C2D3P4_LACBR Length = 281 Score = 208 bits (530), Expect = 1e-52, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 121/278 (43%), Gaps = 3/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + ++Q + L++++KK+A Y++ P A + + LA S +SV + + LGY Sbjct: 3 SPVQMLKQSFDNLSRTNKKIAKYVIDNPQAASEANIEDLAAVTETSTASVSRLVKTLGYS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F L+L+ +Q ++PI I +D L + +K+ + A+ T E + Sbjct: 63 NFREFTLSLA---YTQLRPQNLPIFKDIDANDTLSTIADKIFTSSQRALQDTREGIDENE 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 V + RR+ G+G S + A + K ++ + D L DD Sbjct: 120 FARSVLRIIHCRRLGFFGLGGSSVAALDGYHKFLRTSIDCFYYPDFDVQLMQAVKLGEDD 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + +S++G R+ A+ + R V+AIT + + L + + ++E S Sbjct: 180 CAIVVSHSGKNRQTIKIAETLKRRKVPVIAITSYQDSPLVGHSDITFISSSDESNYRSEG 239 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + + AQ + D LF+ + + IR + +++ Sbjct: 240 MYSLLAQLTIIDTLFMMATVRMGPATEDTIRSVQNIIE 277 >UniRef50_Q184N2 Putative phosphosugar-binding transcriptional regulator n=4 Tax=Clostridium difficile RepID=Q184N2_CLOD6 Length = 283 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 78/281 (27%), Positives = 149/281 (53%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ +L+++Q Y+ L + DKK+ADY+L + LS +LA+ + S +S+V+F++K+GY Sbjct: 1 MSCILKLKQIYEDLTEVDKKIADYILNNTEAISKLSVSELASNSKTSTASIVRFSRKMGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+ +++ L + + N D V K+ +N + T +N ++ Sbjct: 61 SGFGDLKIEIAKDLMGKENEYTYVDENYDCNIDS---VINKITNKNIETINQTRLLNEKD 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + E V + A+ + + G+G S LVA + KL++I A D H L + Sbjct: 118 IIKEAVEQIIKAKNVYIFGVGGSALVALDLQMKLLRINKQAFTSLDSHTQLMVSSNVDKE 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ +AISY+G +E+ + + G KV+ IT ++ N L + + L E+ Sbjct: 178 DIAIAISYSGESKEVIKSIENAKLKGCKVICITKYSDNHLSKISDLKLVVPNIEKRLREG 237 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +IS+ A L D+++I++IQ++L A ++++ ++ ++ L Sbjct: 238 AISSRIAMLTLIDIIYISIIQENLNEAEQKLQETKRILDYL 278 >UniRef50_C8W838 Transcriptional regulator, RpiR family n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8W838_ATOPD Length = 304 Score = 207 bits (528), Expect = 2e-52, Method: Composition-based stats. Identities = 75/271 (27%), Positives = 135/271 (49%), Gaps = 2/271 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 LR+ + + + +++ + DY+L P+ S +LA + S S+VV+ +KLG G Sbjct: 4 VRLRLEEYRKNASSAERDIIDYILSDPEAVVGQSIHKLAAQTYTSASTVVRLCKKLGCGG 63 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + + AL LA +S + + I D ++ EK+ +N +++ T+ + + + Sbjct: 64 YKEFQQALIYELAVSNKSNDIAVGGVIA-GDTTDVIIEKVTAKNISSLELTMQLLDAQVV 122 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V+++ A I L G+GAS LVA++ KLM++ N D H+ L + S +DL Sbjct: 123 DSVVSLMMQAHSICLFGMGASLLVARDLQLKLMRLNINCNLSDDYHSQLLYAKNMSREDL 182 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAIT-GFTPNALQQRASHCLYTIAEEQATNSAS 241 + +SY+G+ RE A G KV++IT G + L R+ + L E S + Sbjct: 183 AIVVSYSGLTREAIECAWIAKANGAKVISITRGGIDSELIHRSDYVLGVAETEHIMRSGA 242 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIR 272 +S+ AQ + D LF A + ++ E + +R Sbjct: 243 MSSRIAQLNVVDALFAAYVNRNYEKSVKRFS 273 >UniRef50_Q45581 Uncharacterized HTH-type transcriptional regulator ybbH n=7 Tax=Bacillaceae RepID=YBBH_BACSU Length = 283 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 75/279 (26%), Positives = 137/279 (49%), Gaps = 5/279 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L I+ L S++KLADY+L P A + +++ A S ++V++ + LG KGF Sbjct: 6 LAIIQSMKHKLPPSERKLADYILAHPHKAIESTVNEISALANSSDAAVIRLCKSLGLKGF 65 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 LK+ ++ LA P+ + I +PL + EK A+ T ++ ++L Sbjct: 66 QDLKMRVAGDLAK----PTFQGYRDIVPHEPLPSISEKTAGNAIQAIQDTSDLMDYKELE 121 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 V++L A + G+GASG+VA++ K ++I A A D H + + + + DD++ Sbjct: 122 RAVSLLLKAHTVHFIGLGASGIVAKDAQQKWLRIHKQATAFTDTHLVASLIANADKDDIV 181 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT-IAEEQATNSASI 242 AIS++G +E+ G +++T F+ ++ A LYT + E SA+ Sbjct: 182 FAISFSGETQEIVELFAMAKEKGITTISLTQFSQTSVSALADVPLYTAHSNEALIRSAAT 241 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+ AQ + D+LF+ + + E I + A ++ + Sbjct: 242 SSRLAQLFIIDVLFLGMAAEQYETTTGYIDKTRAAIQSM 280 >UniRef50_A0AJB4 Complete genome n=7 Tax=Bacillales RepID=A0AJB4_LISW6 Length = 283 Score = 207 bits (527), Expect = 3e-52, Method: Composition-based stats. Identities = 74/281 (26%), Positives = 126/281 (44%), Gaps = 5/281 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + RI L S+KK+ +L P+ S +LA +A S ++VV+F + +G + Sbjct: 5 SIINRIEGILHDLPTSEKKIGQTVLANPEFTTTASIHKLAQKADASGAAVVRFCKSIGLQ 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 FP LK LS LA P + I ++ + +KL+ M T + E K Sbjct: 65 SFPELKRQLSLDLAQ----PQKIGYYDIEPNEDFHTITDKLVSNMMQTMNDTASQLDETK 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + +L A I G+GAS LVA++ + K ++ G + A +D H L Sbjct: 121 VLTACDLLGDADTIYTYGVGASWLVAEDISQKWLRAGKHVLATQDAHVLAMAFATGKRKS 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSA 240 + +AIS +G E+ D+ V+++T F N L+++A L T A E S Sbjct: 181 VFIAISNSGETSEVLQLVDQAKLNDVTVISLTRFGNNKLKEKADLALETSRAPEAEIRST 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + S+ AQ ++ D+LF + ++I+ S + Sbjct: 241 ATSSRQAQLLVVDILFYYYASHHYDEMIQQIKQSREATNRF 281 >UniRef50_C3RKW6 Sugar isomerase n=3 Tax=Bacteria RepID=C3RKW6_9MOLU Length = 291 Score = 207 bits (527), Expect = 4e-52, Method: Composition-based stats. Identities = 65/282 (23%), Positives = 125/282 (44%), Gaps = 3/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + ++ + S+K +A Y+L + +LS ++LA + S +++V+ +KLG Sbjct: 1 MSIMTQLEFELD-FSSSEKTIAKYILDNGEDILNLSVKELAKQTYTSPATIVRLCRKLGL 59 Query: 61 KGFPALKLALSEALA-SQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ K+ S L + V ++ D + ++ + A+ TLN+ Sbjct: 60 NGYGDFKIKYSAELQFDKKNKKRVDVNFPFGNTDSNSQIAYRIANLHQEAIEDTLNLVDF 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L + + +L ARRI L G G S L +F K+M+IG SP Sbjct: 120 KNLDKIINLLDQARRIYLFGNGNSLLAGFDFQHKMMRIGKMVEMRAHAGEQGFLSYTCSP 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN- 238 DD+ + ISY+G E+ A + ++ +L IT N L + ++ + T + E+ + Sbjct: 180 DDVAILISYSGETNEMVELAKFLKKMHVPLLGITSIGDNQLSKYCTYIMNTGSREKIFSK 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A S+ + L DL+F + + + + + + L Sbjct: 240 IAPYSSKTSISYLLDLIFSCIFRLNYDHYINEKINRDKLFDH 281 >UniRef50_C2JLW7 Bifunctional RpiR family transcriptional regulator/sugar isomerase n=22 Tax=Enterococcus faecalis RepID=C2JLW7_ENTFA Length = 290 Score = 207 bits (527), Expect = 4e-52, Method: Composition-based stats. Identities = 70/281 (24%), Positives = 138/281 (49%), Gaps = 5/281 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N +L I+ R Q L +S++K+A+Y+L +T +++Q+LA +AG S +++++F + Sbjct: 12 NIVLSIQDRLQQLPKSERKIAEYILKNTETVISMNAQELAKQAGSSPAAIIRFCHSMDVN 71 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LKL LS L + + ++ + + +KL + + + Sbjct: 72 GFTELKLLLSANLGQMKQQM----YTEVTKGESTADIKQKLQARFVHVVERSGQTLEDVA 127 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 ++E V +L I + G+GAS LVAQ+ K ++G D H + + ++ Sbjct: 128 VNEAVDLLEKTEVIFVYGLGASSLVAQDIYQKFTRLGRTVFTTLDHHLFASMLGSTEKPS 187 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ-ATNSA 240 + + IS +G +E + AD + G +++IT + + +++ L T + E SA Sbjct: 188 VFIVISNSGTNKEASTLADLAKQQGIPIVSITQDEKSVIGEKSDIVLQTSSGEDVPLRSA 247 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + AQ + D+LF A ++ + E+I+ S V++L Sbjct: 248 ATVSLVAQLYVVDVLFFAYAAKNYKETLEKIQISRKNVERL 288 >UniRef50_P37767 Uncharacterized HTH-type transcriptional regulator yfhH n=149 Tax=Enterobacteriaceae RepID=YFHH_ECOLI Length = 282 Score = 206 bits (525), Expect = 6e-52, Method: Composition-based stats. Identities = 282/282 (100%), Positives = 282/282 (100%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY Sbjct: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE Sbjct: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD Sbjct: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA Sbjct: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV Sbjct: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 >UniRef50_Q2G836 Transcriptional regulator, RpiR family n=4 Tax=Proteobacteria RepID=Q2G836_NOVAD Length = 296 Score = 206 bits (525), Expect = 7e-52, Method: Composition-based stats. Identities = 73/278 (26%), Positives = 135/278 (48%), Gaps = 4/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L RIR ++++ K+A Y++ P +S LA S+ SV+ F + +G Sbjct: 19 NALTRIRSALPQMSKTAAKIAAYVVEHPADVVGMSITDLAALVDASEGSVINFCRSIGLG 78 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LKL+L++ + P IH + +D V K+ A+ +L+V + Sbjct: 79 GFQHLKLSLAQEIVQ----PVHFIHEDLEREDSTETVCRKVFHSGIQALRDSLSVLDPKA 134 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V ++R+ARR+ + GIG+S +A++ ++L++IG +A V D H + D Sbjct: 135 MAAAVDIIRAARRVEIYGIGSSAPIAEDAHYRLLRIGLDARVVIDSHVQAISASRCDKDV 194 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L IS++G E A G + + IT F + +Q A L+T+A E + + Sbjct: 195 AVLTISHSGSTNETVAATRLAHEAGARTIVITNFGRSPIQAYADVVLFTMARETRFRTEA 254 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +++ AQ + D L AL D + + + ++ + ++ Sbjct: 255 MTSRIAQLCVIDALIAALALADYDRSTDVLKQTFDVLS 292 >UniRef50_C3RM33 Sugar isomerase n=2 Tax=Bacteria RepID=C3RM33_9MOLU Length = 312 Score = 206 bits (524), Expect = 7e-52, Method: Composition-based stats. Identities = 59/282 (20%), Positives = 127/282 (45%), Gaps = 3/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L ++ + S+K +A Y+L ++S+ QLA S +++ + QKL Y Sbjct: 1 MSLLRKLEMAVD-FSTSEKLIATYILKNGPDVLNMSTSQLAKATYTSPATITRLCQKLEY 59 Query: 61 KGFPALKLALSEALASQ-PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 KG+ K+ALS L + + + D + + + ++ T+N Sbjct: 60 KGYNDFKIALSAQLQYTFDRNSETNPNFPFKKRDTIHTIKHSIATLAKDSINLTVNNIDN 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L + + ML A+ I + G+ +A +F +K+ +IG N ++ L S+ Sbjct: 120 DILAKIIIMLDQAKVIDIYGVSGPLRIASDFQYKMFRIGKNVQIAPMVNEQLFQAAQSNK 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN- 238 D + ISY+G E+ AA+ + R ++AIT F + L + + L+ + E+ + Sbjct: 180 DHCAILISYSGETNEVIAAAELLKRRKVPMIAITSFGESRLSKLCDYVLFLDSRERIYSK 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ + + ++ D+++ L + + E ++ ++ Sbjct: 240 VSTFGSTISIHIMLDIIYSCLFARHYDENLELKLETDHIIDH 281 >UniRef50_Q04DU1 Transcriptional regulator n=2 Tax=Oenococcus oeni RepID=Q04DU1_OENOB Length = 282 Score = 206 bits (524), Expect = 9e-52, Method: Composition-based stats. Identities = 73/279 (26%), Positives = 132/279 (47%), Gaps = 4/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N IR Y+ L +K++ADY+L D+ + Q L+++ G+S +S+ +F + LGY Sbjct: 3 NVTETIRSYYEKLHPGEKRIADYILSHQDSVMDATIQSLSDKIGISTASISRFTRHLGYP 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F +ALS + + S +I+ D + +KL AA+ AT + + Sbjct: 63 NFRDFLIALSASKKNS----SSDFFTEIKQSDQSEQIVKKLFSAGIAALTATAANINMKD 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V L S+ +I GIG S +VA N K ++ N + D + + +D Sbjct: 119 LDRVVDWLVSSNKIGFFGIGGSSIVAFNAYHKFLRTNLNIVSHPDYDIQIMQAAHLTSED 178 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L + IS++G ++ L +++ G K++AIT F + + + A L + +EE S Sbjct: 179 LGIVISHSGRNQDTLLVENKLRENGSKIVAITAFPESPIAKNADIVLNSYSEEVNFRQES 238 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +S+ AQ + D LF + + E + I ++++ Sbjct: 239 MSSLVAQITIIDTLFTLVGHRLNEQTDQVINSMRRVIEQ 277 >UniRef50_A5EB66 Transcriptional regulator, RpiR family n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EB66_BRASB Length = 270 Score = 206 bits (524), Expect = 9e-52, Method: Composition-based stats. Identities = 69/271 (25%), Positives = 127/271 (46%), Gaps = 4/271 (1%) Query: 10 RYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLA 69 L +++A+ + QP+ H S ++A VS+ ++V F +++G +GF LK+ Sbjct: 1 MLPELPPKARQIAELIAAQPEPFVHKSITEVAEACDVSEGTIVSFCRRVGVRGFQELKIM 60 Query: 70 LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTML 129 L+ L P I + D V + + + A++ T + S E L E +L Sbjct: 61 LARDLIE----PVRLIQEDLHRGDDPATVTDHIFAAHAASLQETRRLLSMEALAEATRLL 116 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYT 189 R A+RI + GIG+S +AQ+ +++L+++G A A+ D H + + P + +S++ Sbjct: 117 REAQRIEIYGIGSSAPIAQDLSYRLLQLGLAANAIVDSHVQAVSAGMTGPGVATVTVSHS 176 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQG 249 G E LA G + + IT + L LYT+A E ++S+ AQ Sbjct: 177 GSTVETVLATRLAQAAGARTIGITRLGKSPLAAHCEVLLYTVANETRYRPEAMSSRVAQL 236 Query: 250 MLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + D L D E + R++H+ ++ + Sbjct: 237 AIIDTLVSCCALTDTERSVGRLQHAARILSE 267 >UniRef50_B7GUA9 Transcriptional regulator, RpiR family n=7 Tax=Bifidobacterium RepID=B7GUA9_BIFLI Length = 289 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 60/280 (21%), Positives = 109/280 (38%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RI Y L +++ +A Y+ + A L+ Q+A+ A VSQ +V++FA+KLG+ G Sbjct: 7 IRERIDHVYPSLRPAERAVAQYIRDHIEEAADLTVGQMADIAHVSQPTVIRFARKLGFGG 66 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + L+ L A + + + D + K A + + + Sbjct: 67 YRELRYVLRHPAAEHKVTFNPLDGFDLNPWDGEDEIPSKAADGAKALIDELHSALDPKAY 126 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V +L + I + G+ S A + KL +G D + + + Sbjct: 127 RKAVALLAESEFIDIFGVENSLTPAMDLFTKLGYLGLTCRLNTDAYLQQIGAGHLTHGAV 186 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 +A S++G + A G K +AIT L A L T + +I Sbjct: 187 AVAFSHSGSSADTVKALRLAKSHGAKTIAITNAIGAPLASWADVTLLTGRDSHTIYGNAI 246 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 +C A L D+L++ +I D + S +++ V Sbjct: 247 FSCVADTALVDMLYMGVILSDYGRFSTALDESGRMIRDRV 286 >UniRef50_D1AUV3 Transcriptional regulator, RpiR family n=5 Tax=Bacteria RepID=D1AUV3_STRM9 Length = 272 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 53/278 (19%), Positives = 125/278 (44%), Gaps = 11/278 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + I+ Y ++ + K+ADY++ + D + ++ + VS++++V+F +K+G+ Sbjct: 1 MKYITLIQSFYPSFSKQEIKVADYVIKEKDAICFMPLHEITKKINVSEATIVRFVKKIGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGF KL ++ +A + E + + T N+ ++E Sbjct: 61 KGFIDFKLEVAREIA-----------TIEDERNTKEHYIENIEYNIIETIKNTKNLINKE 109 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + + +++++ + G+GASG+ A F + M+ G +V D H + ++ Sbjct: 110 DVENAIEAIENSKKLYVFGMGASGVAALEFQNRFMRFGKIGHSVSDGHFQVMYASTTTEK 169 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ IS +G +L G K++AIT + + + + + + T +E N Sbjct: 170 DVIVVISLSGETVDLIYPLSIAKENGCKIIAITNYILSPIAKLSDIVILTSGKETLLNGG 229 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++ + +Q + D+L ++ + A + + Sbjct: 230 ALVSKMSQLYIIDVLATGYALRNSKKAKLVRQGMAEAI 267 >UniRef50_C0D4M2 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D4M2_9CLOT Length = 282 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 67/278 (24%), Positives = 135/278 (48%), Gaps = 3/278 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 IR +Y L+ S K +ADY+L PD + ++A VS+++V++F KL Y Sbjct: 5 IFSLIRTKYNTLSSSQKDVADYILTNPDKVMMNTLNEIAAACRVSETTVLRFLHKLNYNS 64 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + ++ L++ L+ + +++ + D + +K+I +++ + + + Sbjct: 65 YQLFRINLTQELSKDNQ---ETVYDDVGFQDTEDEIIDKIIHSTVSSITDSRQIIDPASV 121 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V + ARRI++ G+GASG +AQ+ KL+K+G NA D H + + + Sbjct: 122 KAVVEKIAGARRIVVAGVGASGFIAQDLYHKLIKLGLNAVCANDPHIMNILATGLDQNTI 181 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L+ S++G RE+ A +V A+T + + L +A + L + + E S ++ Sbjct: 182 LILFSHSGESREVLDMAAIAKERRCQVCAVTSYAKSTLANQAGYLLCSSSRETMFRSDAM 241 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ Q ++ D+L+++L+ + +I S V K Sbjct: 242 TSRIVQMVIIDILYVSLVIALGDGILPQIHSSRLAVAK 279 >UniRef50_C2C2H3 Bifunctional RpiR family transcriptional regulator/sugar isomerase n=1 Tax=Listeria grayi DSM 20601 RepID=C2C2H3_LISGR Length = 282 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 76/281 (27%), Positives = 125/281 (44%), Gaps = 6/281 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L RI ++ L +S+KK+A+ +L P A S LA A S +++V+F + LG K Sbjct: 5 SILNRIETLFKDLPKSEKKVAEMVLQDPAFASASSIHSLAKRADTSAAAIVRFCKSLGLK 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 FP K L L+S P + D+ + +KL+ + T SE K Sbjct: 65 SFPDFKRQLYSELSS----PVASGYYDFEEDESFDGISQKLLANYFQTLNDTAGQISEAK 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + L A I G+GAS LVAQ+ A K ++ G +D H L + Sbjct: 121 IRTVSEQLEKADTIYTYGVGASWLVAQDIAQKWLRAGKQVVISQDEHVLAMAFA-ARKSG 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSA 240 + A+S +G + A++ + V+ +T F P+ L+ +A L T A E S Sbjct: 180 VFFAVSNSGETTSVIELAEQAKQNNLTVIGLTRFGPSKLKAKADFLLETSRAPEAKFRST 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + S+ AQ + D+L+ + + + E+IR S + Sbjct: 240 ATSSKQAQFFIIDVLYYHYVSRHYDQMIEQIRESRQATDRF 280 >UniRef50_C4L7F8 Transcriptional regulator, RpiR family n=2 Tax=Gammaproteobacteria RepID=C4L7F8_TOLAT Length = 292 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 75/277 (27%), Positives = 140/277 (50%), Gaps = 4/277 (1%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 +IR GL+ +++++A++LL + + S + +A + VS+ +VK ++KLG+ GF Sbjct: 13 AKIRMALPGLSNTERQIAEWLLAKGNVESKTSIKSVAEQLEVSEPLIVKLSKKLGFAGFR 72 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 L+ AL E L+S + +I D + V K+ + AM +V + Sbjct: 73 ELRQALVEYLSS----LPIDSEQEIEPTDSVESVLNKVFANSIQAMKEARSVADPILIAN 128 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 ++ +A+ +++ G+G S V Q+F KL++IG + A D H +L +D+++ Sbjct: 129 AAQLIFNAKNVVIFGVGGSAAVCQDFEHKLLRIGILSRAYSDFHMMLMVSSQLDENDVIV 188 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 IS +G REL A + + +V+ IT +AL Q A + +++ A+ + A Sbjct: 189 VISQSGDTRELLKAVENAKQRHSRVICITNNDTSALAQLADYAIFSPAKGGILLGQNAVA 248 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 Q L D+LFIA++ QD + E++ +V+ L Sbjct: 249 RIVQLNLLDVLFIAILLQDHDKNREKLTRGSRVVRHL 285 >UniRef50_A9BH25 Transcriptional regulator, RpiR family n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BH25_PETMO Length = 283 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 59/284 (20%), Positives = 131/284 (46%), Gaps = 5/284 (1%) Query: 1 MN-GLLRIRQRYQGLAQSDKKLADYLLL-QPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 M+ + R +S+KK+A+Y+L + + ++ +LA + G S++++ +F +K Sbjct: 1 MSKIQAFLNSRMPTFTKSEKKVAEYILNSKKEDITRITITELATKCGTSEATIARFVKKA 60 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 G++ F KL L+ L + + I +D + + K+ + ++ +T ++ Sbjct: 61 GFETFQDFKLTLA--LDNNEDIFEEEKDITIFKNDSPQEILRKVKLGSLKSIESTTSILD 118 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 + +RSA+RI + G+G+S VA+ +KL ++GF + A+ D H + + Sbjct: 119 INNFLQAANFIRSAKRIEIYGVGSSSAVAKILQYKLTRLGFPSYALEDPHMQAISAATLN 178 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 DL + IS +G ++ + + + G +++T + + + + L + E Sbjct: 179 FGDLAIGISQSGSTKDTVDSLNVAKKHGATTISLTEHANSPITKYSDVVLEIFSGENPVK 238 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPER-IRHSEALVKKL 281 +++ + Q ++L L + E A + A+V KL Sbjct: 239 TSAGRSILVQIFAVEILSGLLYSIEYEKALTTGKDTARAVVNKL 282 >UniRef50_C2D9S0 RpiR family transcriptional regulator n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9S0_9ACTN Length = 282 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 65/273 (23%), Positives = 129/273 (47%), Gaps = 2/273 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L+ +++ ++ S++++ Y+L +P+ ++ +LA VS +++ + +KL Sbjct: 5 SLLVLLKENKDRVSTSEQQIITYILKKPEAIVGVTIHELAQMTFVSAATISRLLRKLSLG 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + L LAS S I + I D + + K++++ ++ T +N+ + Sbjct: 65 GYKEFQQYLIYELASMKTSRQSSIED-INPKDSTKQIMFKIMRKTIESITLTEKLNNPKT 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + C ++ +AR I + G+G+S L AQ+ +K ++ + D H L S D Sbjct: 124 IDSCAELIHNARHITIFGMGSSLLSAQDLQYKFLRANIDCTLSADWHMQLIAANNMSDGD 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNA-LQQRASHCLYTIAEEQATNSA 240 + +A SY+GV E GGKV+AIT + L + A LY + E S+ Sbjct: 184 VAIAFSYSGVTPETLRCVHAAQDHGGKVIAITRSVNSTELVRHADIVLYVASTEPLLRSS 243 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRH 273 + ++ Q M+ D LF L+ + ++ I Sbjct: 244 AGTSRITQLMIVDTLFSTLVNKHYDVYATAIED 276 >UniRef50_A9M040 RpiR/YebK/YfhH family transcriptional regulator n=24 Tax=Neisseria RepID=A9M040_NEIM0 Length = 282 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 80/278 (28%), Positives = 132/278 (47%), Gaps = 4/278 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +I + L+ +++K+A+ L +P H + ++A A VSQ +V++F + LGYKG Sbjct: 1 MLSKISESLANLSGAERKVAECALAEPKWFVHAAVAEIAERASVSQPTVIRFCRSLGYKG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 P KLALS ++ + +H ++ DD + V EK++ A++ E +L Sbjct: 61 LPEFKLALSASIGHEGM---PYVHEELNADDDMASVVEKVLGNAAASLLGERRFLKESEL 117 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + L ARR+ G+G SG+VAQ+ K + G + A D H L S D+ Sbjct: 118 ENAIATLMHARRVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYVDTHTQLMAASVLSDQDV 177 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L+AIS TG EL A G V+A+T + L Q A L +E A + Sbjct: 178 LVAISNTGSSIELLDAVSIAKENGASVIALTRN-DSPLAQLADCVLSVATQENAELYTPM 236 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + Q + D+L I L + + A +++ S+ + Sbjct: 237 VSRLLQLAVIDILAIGLALRLGDAASLQLQKSKKSIHN 274 >UniRef50_C1I531 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I531_9CLOT Length = 284 Score = 204 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 69/272 (25%), Positives = 133/272 (48%), Gaps = 1/272 (0%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 L +++ K+ DY+ +++ +++ ++AN GV +++V +F +KLG++ F K+ + Sbjct: 9 RSELTKAENKICDYIEEYMNSSIYMTVTEIANNCGVGEATVTRFCRKLGFRSFLEFKMTM 68 Query: 71 SEALASQPESPSVPIH-NQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTML 129 ++ + I + +D L +K + N ++ TL + E +L Sbjct: 69 AQEFKNSGYDNEDIIESEVVSENDSLGEFVKKFYEINVNSLEETLKKIDYSMIEEISDIL 128 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYT 189 A+RI TG+G SG++A++ +K MKIG RD H L+ D+L IS + Sbjct: 129 VKAKRISFTGVGHSGIIAEDAYYKFMKIGLICNCYRDSHTLVMMASLMKEGDVLFIISNS 188 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQG 249 G E+N+AA+ KV++IT + L + + + L +E + S +Q Sbjct: 189 GNTEEINIAAEIARENNVKVISITENLLSKLARVSDYVLNYTDQEIKIDMESFGIRISQN 248 Query: 250 MLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 L DL+ +I+++ E+A +E ++KL Sbjct: 249 FLIDLICTNVIRKNKEIAVVSKSKTEKAIEKL 280 >UniRef50_A0JVW9 Transcriptional regulator, RpiR family n=2 Tax=Actinomycetales RepID=A0JVW9_ARTS2 Length = 309 Score = 204 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 62/282 (21%), Positives = 124/282 (43%), Gaps = 8/282 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RI R L S +++A+ +L P+ A+ ++ +LA AGV +S+V +F ++LG G Sbjct: 10 LLHRISGRLPYLPPSLRQVAEAVLKSPEQAQTMTISELAVAAGVGESTVSRFVKELGIDG 69 Query: 63 FPALKLALSEA------LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNV 116 + ++ L L+EA S + S ++ + D + K+ + + ++ T Sbjct: 70 YKSMLLGLAEATFISKAATSARTADSEVVYEGVNRGDTAAEIAGKVERSSVQSLRRTGQR 129 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA 176 E + V ++ ++ +I + +G+S + A+ + + G RD + Sbjct: 130 QDVEAIQRAVDLIDASNTVIFSCMGSSSIAAEEAVMRFTRAGKKCMLYRDTTIQVMLAAI 189 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA--EE 234 P DLL+ IS +G + A + G +AITG + L+ A LYT Sbjct: 190 IEPGDLLIGISDSGRSTPIIDAMHLARQRGAATIAITGAEGSPLRNYADVVLYTATVPSG 249 Query: 235 QATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 S+++ Q ++ D+L+ + + E ++ + Sbjct: 250 GELYGESVTSKWGQLLVIDILYATYASRHYDATVEHLKQTYQ 291 >UniRef50_A9BXM8 Transcriptional regulator, RpiR family n=16 Tax=cellular organisms RepID=A9BXM8_DELAS Length = 323 Score = 204 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 60/277 (21%), Positives = 111/277 (40%), Gaps = 1/277 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RI LA +++++A +L P ++LA A VS+ +VV+F + +GY G Sbjct: 43 MLDRITASLPSLAPAEQRVARLVLADPRAFARQPVRELAERAHVSKPTVVRFCRSMGYDG 102 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 KL L+ +++ + + D + V + + A E+ Sbjct: 103 LADFKLKLAGSVSEGVPFIHRSVDTDDKTSDVMVKVVDNAVAAFLQYRNAASTTAIEQAA 162 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + ++ RRI G G SG+VAQ+ K ++G + A D H + + P D Sbjct: 163 QAIASTWQTGRRIEFYGAGNSGIVAQDAQHKFFRLGVTSLATSDGHMQVMSATLLGPGDC 222 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + IS +G R+L AAD + G +AIT + L L E + + Sbjct: 223 AVIISNSGRTRDLMDAADIARKNGATTIAITAS-GSPLASACHIHLAADHPEGYDRYSPM 281 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + ++ D+L + + + + ++ Sbjct: 282 VSRLLHLLVIDVLATCVALRIGPALQPALEQMKNNLR 318 >UniRef50_Q9WYG1 Uncharacterized HTH-type transcriptional regulator TM_0326 n=7 Tax=Thermotogaceae RepID=Y326_THEMA Length = 280 Score = 204 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 81/282 (28%), Positives = 142/282 (50%), Gaps = 5/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGV-SQSSVVKFAQKLG 59 M+ + RI+++Y ++KK+AD +L P S L+ +AGV S++SVVKF +KLG Sbjct: 1 MDVIQRIKEKYDEFTNAEKKIADTILSDPKGIIESSISDLSEKAGVKSEASVVKFYKKLG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 F K+ L+++++ P ++ + +D + + EK+ K A+ TLN Sbjct: 61 LNSFQQFKVLLAQSISRAP---LEIVYEDVSSEDDTKTITEKIFKATVRAILDTLNWLDI 117 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + + V + ++A+RII G AS VA + K +IG N D H + A + +SP Sbjct: 118 DSIERTVDLFKNAQRIIFIGFAASAAVAFDAFHKFTRIGKNCLFSNDEHIIAAILATASP 177 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DLL+AIS+TG + A + + V+ ITG + L + + L T +E + Sbjct: 178 SDLLVAISHTGETISVVNFAKKAKEMKMPVVTITGNRKSTLAKYSDVVLATNTKETKIRT 237 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++++ Q ++ D ++ L +D A E + S V +L Sbjct: 238 DAMTSRIVQLVILDTIYTLLAARDP-RAIENLNKSRLAVSEL 278 >UniRef50_Q13K65 Transcriptional regulator, RpiR family n=7 Tax=Burkholderia RepID=Q13K65_BURXL Length = 287 Score = 203 bits (517), Expect = 4e-51, Method: Composition-based stats. Identities = 64/276 (23%), Positives = 115/276 (41%), Gaps = 6/276 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + IR L +++K+AD +L D A S +LA A VS+ SV +F + +G Sbjct: 5 NLIPHIRSALANLRPAERKVADMVLSDVDFAMRASITELAQRAEVSEPSVTRFCRAIGAH 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G K+ L++++A + DD ++ + +K+ + + Sbjct: 65 GLRDFKMQLAQSVAGG----VPYASTAVARDDDVQTLMDKVGEAAIGGITHARGALDPAV 120 Query: 122 LHECVTMLRSARRIILTGIG-ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + L SARR+ G+G SGLVAQ+ A + +++ + A D H P Sbjct: 121 VESAIAALSSARRVFFFGVGSGSGLVAQDAALRFLRLDIASTAFTDGHLQRLYAGLMEPG 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ AIS++G E+N + G +A+T + L L + Sbjct: 181 DVAFAISHSGRSVEVNESIQIAKERGATTIALTNV-GSRLAWLVDIPLLLRVPSPIDPNT 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + + D L I + + E++RH++A Sbjct: 240 PGVSRLVHLCIMDALAIGVALKAGPKTLEKMRHAKA 275 >UniRef50_A4VXR0 Transcriptional regulator n=5 Tax=Streptococcus suis RepID=A4VXR0_STRSY Length = 275 Score = 203 bits (517), Expect = 5e-51, Method: Composition-based stats. Identities = 75/279 (26%), Positives = 131/279 (46%), Gaps = 7/279 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + + L ++ KL DY+ ++ QLA+ AGVS +++ + ++K+GY Sbjct: 1 MN-RNILNHSIENLTPTENKLLDYIEENIHRIETMNIYQLADNAGVSTATISRISKKMGY 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F LK+ ++++ ++ D + + KLI T + T++ + E Sbjct: 60 SNFNKLKIEIAKS------KYDDLLNAHFTPSDSIDDISTKLIHSITISNQQTVSFLNLE 113 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L V +L+SA RI L G+GASG+V +F +KL +IG +D H +A + + Sbjct: 114 ELEAAVKLLQSASRIYLFGVGASGIVCSDFYYKLSRIGKTCIFAQDTHIQMANIATAGNG 173 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL + ISY+G+ +E+ G + ITG N L A E Sbjct: 174 DLAIGISYSGMTKEVVEPLRFAKENGVSTITITGTGKNQLADLADITFRIPRHEHELRVG 233 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +I++ LTDLL++ALIQ + + ++ L + Sbjct: 234 AITSRSNSLFLTDLLYLALIQDHKQEITAILEQTKHLTE 272 >UniRef50_A1AYM0 Transcriptional regulator, RpiR family n=3 Tax=Proteobacteria RepID=A1AYM0_PARDP Length = 287 Score = 203 bits (517), Expect = 5e-51, Method: Composition-based stats. Identities = 71/276 (25%), Positives = 134/276 (48%), Gaps = 4/276 (1%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 +IR + L + ++ D + + D + +Q++ +AGVS + VVK A+KLG+ GF Sbjct: 12 AQIRMKLPFLTPLEARVVDTITGRNDLDLTTALRQVSEDAGVSDAMVVKIAKKLGFNGFR 71 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 + AL + +H++I +D + K+ + + A+ T+++ Sbjct: 72 DFREALVVYRQTD----VASLHSEISPEDSSADIIRKVFQTSIQALEETMSIIDVSAFDR 127 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 T+L AR+ G+G S +A++ A K ++IG A D H +L + P+D+++ Sbjct: 128 AATLLHGARQRDFYGVGGSAQIARDVAHKFLRIGLRAGVQDDPHMMLMSAALLGPEDVVV 187 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 A S++G + AA + G +V+AIT + L + A L + A+ + +A Sbjct: 188 AFSHSGTTSNVIEAARLARQQGARVIAITNYATAPLSELADIALCSTAQGSPLLGENAAA 247 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 AQ + D +F+A+ Q+DLE A ++ + V Sbjct: 248 RIAQLNIMDAIFVAVAQRDLERAEAQLARTRNAVDN 283 >UniRef50_D0W145 Transcriptional regulator HexR n=3 Tax=Neisseriaceae RepID=D0W145_NEICI Length = 315 Score = 203 bits (516), Expect = 6e-51, Method: Composition-based stats. Identities = 78/276 (28%), Positives = 132/276 (47%), Gaps = 4/276 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +I + L+ +++K+A+ L +P H + ++A + VSQ +V++F + LGYKG Sbjct: 1 MLSKISESLADLSGAERKVAECALAKPKWFVHAAVAEIAEHSSVSQPTVIRFCRSLGYKG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 P KLALS ++ + +H ++ DD + V EK++ A++ E +L Sbjct: 61 LPEFKLALSASIGHEGM---PYVHEELNADDDMSSVVEKVLGNAAASLLGERRFLKESEL 117 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + L ARR+ G+G SG+VAQ+ K + G + A D H L S +D+ Sbjct: 118 ENAIATLMHARRVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYVDTHTQLMAASVLSSEDV 177 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L+AIS TG EL A G ++A+T + L Q A L +E A + Sbjct: 178 LIAISNTGSSIELLDAVSIAKENGASIIALTRN-ESPLAQMADCVLSIATQENAELYTPM 236 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + Q + D+L I L + + A +++ S+ Sbjct: 237 VSRLLQLAVIDILAIGLALRLGDAASLQLQKSKKAY 272 >UniRef50_D0GPL3 Transcriptional regulator, RpiR family n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GPL3_9FUSO Length = 285 Score = 203 bits (516), Expect = 7e-51, Method: Composition-based stats. Identities = 61/279 (21%), Positives = 123/279 (44%), Gaps = 4/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N I+ Y L++ +K +ADY+L + + +L+ LA GV S++ F +KLG+K Sbjct: 5 NMKFTIKTIYNDLSKKEKLIADYILKNINKSTNLTIADLAENIGVVNSTIFSFTKKLGFK 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF + +L + + +H +I +D + + EK+ N ++ T + ++ Sbjct: 65 GFREFRDSLLRDQFNSN----INVHEKISKNDSITSIIEKVFNSNIKSLEDTKKIAEKKS 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + +L + G+G S ++A + K ++ D H L + +D Sbjct: 121 FSTALKILTQVDIVHFFGVGGSSVIAHDAYHKFLRSPLKCRFDSDFHLQLMQASLLTKND 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 IS++G+ +E AD K++ +T + + L ++A + AEE S + Sbjct: 181 CAFIISHSGMTKESIEIADIAKERKAKIIVLTSYPLSILAKKADITFISTAEEIEYRSEA 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +S+ AQ + D +FI ++ + + + K Sbjct: 241 LSSRIAQLSILDTIFILVMLNNPTKTQISLNKIRTTIAK 279 >UniRef50_Q9K6Z8 Transcriptional regulator (Hex regulon repressor) n=2 Tax=Bacillus RepID=Q9K6Z8_BACHD Length = 284 Score = 203 bits (516), Expect = 7e-51, Method: Composition-based stats. Identities = 68/278 (24%), Positives = 136/278 (48%), Gaps = 2/278 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +I Q ++ K+A+Y+L P+ ++++QLA +A SQSS+V+F ++LG + Sbjct: 6 LLAKIEQELASFPAAETKVANYVLKHPELVPTMTTKQLAEQANASQSSIVRFCKRLGLES 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 FP LKLAL++ L + + + DD ++ +K+ N A+ +E+ Sbjct: 66 FPKLKLALAKELTRKEAYINSAS--LLETDDSPPILFQKVSSLNQMALDMATKAMNEQAF 123 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 E V + A++I G+G S + +K M++GF++ A D H ++ + D+ Sbjct: 124 TEAVEQMVKAKKIAFFGVGGSFTSCIDGQYKFMRLGFHSLASGDYHQMIPFITMMDEQDV 183 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ +S +G +E+ AD K++ IT + +AL ++A+ L E SI Sbjct: 184 VICMSTSGNTKEVLDIADYAKERNVKLIGITASSRSALTRKAAVSLLIPDIEVQQRIGSI 243 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ +Q + D L++++ + + S ++ Sbjct: 244 ASRTSQLNVIDALYVSVFHRIGSDLLDAFDASRKKTEE 281 >UniRef50_D1AG49 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AG49_SEBTE Length = 283 Score = 202 bits (515), Expect = 9e-51, Method: Composition-based stats. Identities = 60/276 (21%), Positives = 124/276 (44%), Gaps = 2/276 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ ++++R+ ++ A Y++ D LS +LA + S +++++ +K+G Sbjct: 1 MSLIIKLREAK-NFTPNEIGAAKYIISHSDEVIRLSCTELAKKTYTSPATIIRLCKKIGI 59 Query: 61 KGFPALKLALSEALASQ-PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ K+ L+ + S + +N+I D + + +K+ + ++ T + + Sbjct: 60 GGYQEFKVILATEINFFIKNSMEINKNNEIDKKDSISDIIDKISSLSIDSLKETKILTDK 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + + M+ +A + L G GAS VA + +K M+IG A + S+ Sbjct: 120 NVVKSVIDMINNAEILDLYGSGASHFVALDANYKFMRIGKVTATYALYDQQYVQAKNSNE 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 + + SY+G E+ A + K++ IT + N L++ A LY A+E S Sbjct: 180 NHAAIIFSYSGETAEMIEIAKILTENKAKIITITKNSDNTLEKFADKSLYVTAKENLYRS 239 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 A+I + + + D+L+ A E A E + + Sbjct: 240 AAIYSRISMLNVIDILYTAYFNLIYEKALEALGKTR 275 >UniRef50_C5CG85 Transcriptional regulator, RpiR family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CG85_KOSOT Length = 275 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 61/277 (22%), Positives = 139/277 (50%), Gaps = 7/277 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +++++ Y L++S++++A Y++ +PD H + +LA + S+++V + +KLG+ G Sbjct: 2 IIVQLKGIYDSLSESERRVAKYIIERPDDVIHYTITELAKFSHSSEATVYRLVKKLGFSG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + + K++L+ L+ E + E++++EN + T+ V + L Sbjct: 62 YQSFKISLARELSIPQEVIEEGSE------GSYQNFVERIVQENISLAKETMAVLDLDAL 115 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V ++ +ARR++ G+G S +VAQ+ ++ +GF++ D HA + + +D+ Sbjct: 116 KKAVELIINARRLVFFGVGRSAVVAQSGSFNFALLGFSSTHYIDPHAQVMVASGLTNEDV 175 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ IS+TG R+ + G K + IT + + + LYT A + + S Sbjct: 176 VVGISHTGTIRDTVKSVQVAHAAGAKTIVITSGINSPITEVGDVVLYTAA-GKPSTSEFT 234 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + + ++ D+L+ ++ + E + E ++K Sbjct: 235 VSRIGEFLILDILYKTVVARMSERLSKHFDKLEEILK 271 >UniRef50_C8NHI8 Probable transcriptional regulator YbbH n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NHI8_9LACT Length = 281 Score = 202 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 63/281 (22%), Positives = 136/281 (48%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L +I+ ++D+ +A+++ + ++++L + S ++ V+F++K+GY Sbjct: 1 MSVLYKIKSSMSAFTETDRSIAEFVFVNRQVVLESNAKELGDMTKTSAAAWVRFSKKMGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG PA K+AL++ +Q + I + D L + +K T + T ++ Sbjct: 61 KGLPAFKVALAKE--TQSYTNEDDIETFLNPQDSLMGLLQKTENMLTQNIRETFSLLDYH 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + + + A+ + L G+G S +V +F K+ +I N RD+H L+ + + Sbjct: 119 ALEKAIEFIHEAKTVFLLGVGGSSIVCLDFYHKMTRIHQNVMYDRDLHTLMPRIAQLDKN 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITG-FTPNALQQRASHCLYTIAEEQATNS 239 D++L ISY G +N A +G +++ +T + L + L+ EE+ Sbjct: 179 DVVLVISYNGETESVNSIAKVAKTMGARIVGVTKYNLKSTLSTLSDIRLFVPVEEKEIRL 238 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 SI++ ++ +TDLL+ + + D + + + + +K+ Sbjct: 239 GSITSRNSLLTITDLLYYGIAKTDFNVTKDLLVRTRQFIKE 279 >UniRef50_B9K581 Transcriptional repressor of rpiB expression; transcriptional repressor of ribose catabolism (RpiR/YebK family) n=3 Tax=Proteobacteria RepID=B9K581_AGRVS Length = 291 Score = 202 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 69/273 (25%), Positives = 129/273 (47%), Gaps = 4/273 (1%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 RIR L + K+ D + D + S +Q+A AGVS++ VVK +KLG+ GF Sbjct: 14 RIRMMMPMLTPLEAKVVDTVFGMRDFSEETSLKQIAENAGVSEAMVVKITKKLGFSGFRD 73 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 + ++S+ P+ +H ++ DD + +K+ + + A+ TL + + Sbjct: 74 FRSSVSQY----NRQPTTEMHQELSVDDTSLEIVQKVFRTSIHALEETLAILDMAAFDQA 129 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 M+ AR G+G S +A++ A K ++IG A+ D H +L + + D+ + Sbjct: 130 ADMIHKARNRDFYGVGGSAQIARDVAHKFLRIGVRASVFDDSHMMLMSAALLADTDVAIG 189 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 S++G + A + G +A+T + +AL Q A L + A+ + +A Sbjct: 190 FSHSGNTIAVIEALQLARKNGASTIAVTNYGSSALAQSADVVLCSTAQGSPLMGENAAAR 249 Query: 246 HAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 AQ + D +F+A+ Q+D + A + + + V Sbjct: 250 IAQLNILDAIFVAVAQRDYQAAERNLDRTMSAV 282 >UniRef50_A1JQZ2 RpiR family regulatory protein n=12 Tax=Enterobacteriaceae RepID=A1JQZ2_YERE8 Length = 286 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 103/284 (36%), Positives = 167/284 (58%), Gaps = 3/284 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L I LA++ KK+A +L P++ +SS Q A +AGVSQS++VKF+QK+G Sbjct: 1 MSILNEITWLLPELAENQKKIAKCILDNPESILSISSSQFAEDAGVSQSAIVKFSQKIGM 60 Query: 61 KGFPALKLALSEALASQP---ESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 KGFPALK+A+SE L+ P +HN I +D L ++ +KL E TA++ T Sbjct: 61 KGFPALKIAISEELSRNNLFKSYPHKALHNSISPEDSLMVMAQKLAHEKTASIMETTRKI 120 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 + + V+++ +A+R+ + GI +GL A++ ++KL KIG D+H +A Sbjct: 121 NFSVFQQVVSLINAAQRVQIVGIWGAGLTAKDLSYKLQKIGIMTLVEADLHVQIAAALTL 180 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 +P D+ + +S+TG R+++ +AA G V+AITG + L + A + L +I++E Sbjct: 181 TPKDVQIVLSFTGRRKDMKIAATVAKAQGATVIAITGSKVSPLAKIADYVLESISDENEW 240 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+SIS+ AQ LTDL+F+AL+QQ E+A I ++ + L Sbjct: 241 RSSSISSRTAQNTLTDLIFLALMQQRKEMAKPLILNASMTINNL 284 >UniRef50_C1XRD4 Transcriptional regulator n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XRD4_9DEIN Length = 264 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 72/265 (27%), Positives = 122/265 (46%), Gaps = 6/265 (2%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 + + +++A Y+L D + + ++A+ AG S++SVV+F + LG++GF KLAL+ Sbjct: 1 MTPALERIAQYVLHNADQVIYQTVIEVADAAGSSEASVVRFCRDLGFQGFQDFKLALASD 60 Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR 133 L + S I + + + + + T + + + L E V + AR Sbjct: 61 LVT-----SPVILPKQEKPTSAQSTADYVYNTARQVLDETRRLMNVDLLEEVVERILKAR 115 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRR 193 RI G+G +G AQ+FA KL ++G A A D H+ + P DL IS +G Sbjct: 116 RIDFYGVGNAGTTAQDFAQKLQRLGCAAIAYPDPHSAAVSAATLGPKDLAFGISVSGSSI 175 Query: 194 ELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTD 253 + A ++ G +A+T + + + A L T A E S+ A +Q ML D Sbjct: 176 DTVKALEQAKLAGAYTVAVTRGARSPITRFADAVLLTSAPESPLTRGSMGAKISQLMLLD 235 Query: 254 LLFIALIQQDLELAPERIRHSEALV 278 LF + + A E + + A V Sbjct: 236 FLFTRTALRHPKGA-ELLSKTAAAV 259 >UniRef50_B1QW74 Transcriptional regulator n=2 Tax=Clostridium butyricum RepID=B1QW74_CLOBU Length = 281 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 77/281 (27%), Positives = 143/281 (50%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L I+Q Y + +S+KK+ADY+L+ S+ +LAN S SSVV+F++KLG+ Sbjct: 1 MNCSLLIKQIYDKMTESEKKIADYVLVNSSEVYKFSASELANITKTSSSSVVRFSRKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GF K+ L++ ++ I +D +R V K +N ++ T+++ E Sbjct: 61 EGFQEFKIELAKD---DINPVENIEYDYIDTEDNIREVIVKTANKNIQSINDTISLLDEH 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + E + +++A+ I + GIG S L+ + +KL++I NA + H L+ S D Sbjct: 118 TIEEAIKAIKNAKNIYIFGIGESALIGLDLQYKLLRIHKNAMISLESHVQLSMSANISND 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ + ISY G +E+ A + G K + IT F N + + E+ Sbjct: 178 DIAIGISYLGKTKEVYSALSKCKEKGAKCITITKFGENPVSSLGDIKIQVPFVEKDLRIG 237 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +IS+ Q + D+LF+ L +++ + ++ + ++++L Sbjct: 238 AISSRIVQLTVIDILFVGLAKENFSDVEKYLKETRNMIEEL 278 >UniRef50_Q7MD38 Transcriptional regulator n=31 Tax=Gammaproteobacteria RepID=Q7MD38_VIBVY Length = 278 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 58/277 (20%), Positives = 119/277 (42%), Gaps = 10/277 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L+R+R + ++ + +ADY+L + + LA S+++VV+ + +GYK Sbjct: 6 NLLVRLRSNMEPFSKKLRVVADYILENAHDVQFQTITDLARNTQTSEATVVRLCRDMGYK 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ ++AL+ L+ I + + + ++ T + + Sbjct: 66 GYSDFRMALAVDLSQTESRQQNHIEG---------DICDVSAQSAVDSLQDTAKLIDRKS 116 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V + A I G+GAS +V + A++L++IG A D H + SS D Sbjct: 117 LARIVERVHQAEFIGCIGVGASSIVGRYLAYRLIRIGKKAIMFEDTHLAAMSASRSSQGD 176 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L A+S +G +E+ AA + V+++T + L ++ L E + Sbjct: 177 LWFAVSSSGSTKEVIHAAGLAYKRDIPVVSLTNINHSPLSSLSTEMLVAARPEGPLTGGA 236 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++ +L D+L +L++ + ++ + +V Sbjct: 237 FASKVGALLLVDVLVNSLLES-YPEYKDSVQETAEVV 272 >UniRef50_B7RYI4 Transcriptional regulator, RpiR family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RYI4_9GAMM Length = 278 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 72/280 (25%), Positives = 122/280 (43%), Gaps = 5/280 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L + ++S K+A ++ P+ ++ LA +AGVS+ +V +F LGY Sbjct: 1 MTLLTDLADPLSKRSKSAHKIAACVVANPEAILASTTASLAAQAGVSEPTVNRFCTGLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGFP KL+L+ LA + + I DD V K+ + A++ T + Sbjct: 61 KGFPDFKLSLAAELARKQPRMTRD----IDPDDSAAKVAAKIFESTQASLSNTQDHLDLA 116 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V + +AR I L G+GAS VA + KL++ A D+ D Sbjct: 117 ALQDVVAAMSNARSIALCGLGASASVALDAQHKLLRFPIPIMAHTDIINQRVVAAGLGAD 176 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DLL+ ISYTG + A+ + G +V IT + L L + E Sbjct: 177 DLLICISYTGRTTAMIELAELAVSRGCQVAGITS-PHSPLANTCPLVLGVESGEDTDRYT 235 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +++ AQ ++ D+L L + E + ++ + + + Sbjct: 236 PMTSRIAQLVIIDILATCLALEQGEAFADHLQEVKRNLSQ 275 >UniRef50_UPI000196C511 hypothetical protein CATMIT_02677 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196C511 Length = 286 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 67/279 (24%), Positives = 138/279 (49%), Gaps = 5/279 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN +RI++ ++K +A+Y+L S+Q L + S +++++F++K+G+ Sbjct: 9 MNAYIRIKEYNDSYTATEKLIAEYILEN--DILQDSAQALGEKTNTSAAAIIRFSKKIGF 66 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGF LK+ L+++ + + + +D + + EK + N + T + + + Sbjct: 67 KGFSDLKMNLAQSTKEEKQQ---EVDLIFEPEDNISTLVEKGCRLNMNTVLKTYQLINID 123 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L E + +L +A I L G+G S ++ + KLM+IG D+H + Q+ + Sbjct: 124 TLEESIDLLNNASTIYLFGVGGSSVIGLDIYQKLMRIGKKVIYNADLHVQMTFAQSMDQN 183 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D L ISY+G L A + V++IT N + + +++ L +EE+A Sbjct: 184 DAALIISYSGSTTGLVDVARVLHEKQIPVISITQINANPISKLSTYSLKVPSEEKALRIG 243 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++S+ + ++TDLL+ + +++ E + + S+ V Sbjct: 244 AVSSRISSFVITDLLYYGVFKKNFEEHKKNLIDSKDNVS 282 >UniRef50_A9MIE1 HTH-type transcriptional regulator murR n=48 Tax=Enterobacteriaceae RepID=MURR_SALAR Length = 287 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 94/281 (33%), Positives = 156/281 (55%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L ++R ++++K+A +LL + +SS+ +A + +SQSS+VKFAQKLG Sbjct: 1 MLYLAKMRNAEGEFTENEQKIATFLLAHVGELKTVSSRNMAKQLEISQSSIVKFAQKLGA 60 Query: 61 KGFPALKLALSEAL---ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 GF L++AL E + +V +H+ I +D L ++ KL +E A+ T N+ Sbjct: 61 NGFTELRMALIEEHSVSREKKRDKAVHLHSSITSEDSLEMMARKLNREKIVALEETYNLM 120 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 E+L + + ++ A I +TG+G S LV ++ ++KLMKIGF A D H QA Sbjct: 121 DYERLEQVINLISKAPLIQITGVGGSALVGRDLSFKLMKIGFRVACEVDTHVQATIAQAL 180 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 D+ +AISY+G ++E+ L A+ + G V+AIT + L++ A + L T++ E Sbjct: 181 RQGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLADSPLRRLADYTLDTVSGETEW 240 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 S+S+S AQ +TDLLF+ ++Q + + I S L+ Sbjct: 241 RSSSMSTRTAQNSVTDLLFVGMVQLNDVESLRMIERSSELI 281 >UniRef50_Q2JBJ8 Transcriptional regulator, RpiR family n=1 Tax=Frankia sp. CcI3 RepID=Q2JBJ8_FRASC Length = 299 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 71/277 (25%), Positives = 117/277 (42%), Gaps = 4/277 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 + +R L S +K+ +L P HL+ LA+ G S ++VV+F Q LG KGF Sbjct: 24 IAHLRACLPTLTPSGRKIGQLILDDPREIVHLTVTDLADRTGTSVATVVRFCQDLGLKGF 83 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 LK+ L+ P +H + D + EK++ +A+ T Sbjct: 84 ADLKIRLAGEA----IPPERGLHEAVTHADSPATILEKILHSTESALSETTRTVDRAAFT 139 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 V L+ A R++L G G S +AQ+ A++ +G A A D H + P Sbjct: 140 RAVDALQCADRVLLIGAGTSAPLAQDAAYRFRTLGLLAEAPADAHVQHVAARLLPPASAC 199 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 LAIS+TG RE A G +A+T F + L + A L + E ++S Sbjct: 200 LAISHTGQTRETLAGAAAARAAGATTIALTSFFRSPLTRLADVALVAGSSETNYRVEAMS 259 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + D LF+A+ + A + + ++ + Sbjct: 260 SRIIHATVLDALFVAVHLAQPDRAQKAQELTAEVLTE 296 >UniRef50_D0DKU0 Transcriptional regulator n=1 Tax=Lactobacillus crispatus MV-3A-US RepID=D0DKU0_9LACO Length = 284 Score = 200 bits (508), Expect = 5e-50, Method: Composition-based stats. Identities = 70/281 (24%), Positives = 139/281 (49%), Gaps = 2/281 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN RI + Y L +S + +AD +L P + +++++ N S +SV++F ++L Y Sbjct: 1 MNVRDRILENYTELKKSSRIIADAVLENPKILLNKNAKEIGNYTNTSAASVIRFCKQLNY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG ++ L+++ Q + PI + DD V KL + + Sbjct: 61 KGLKDFQIDLAQSTVKQSQ--LKPIDMIVTKDDKADEVMTKLRVSLSQNFEDLSKTIDIK 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V++++ +R + + GIGAS A++ +KL++ G D+H L + S+P Sbjct: 119 DLQKAVSLIKKSRAVYIAGIGASSFSAKDLFYKLIRSGKTVFYNDDVHIALERIYYSTPK 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ SY+G+ +EL LA + + ++A+T + + L + A L E Sbjct: 179 DVMICFSYSGLTQELLLAVKQAKKNKTPIVAVTRKSESPLSKLADINLKLPDHESLMRVG 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +I++ AQ ++++L++ I DL + + + L++KL Sbjct: 239 AINSTFAQMFISNVLYLCSISSDLGEVKQEMEATGKLLEKL 279 >UniRef50_Q03CT7 Transcriptional regulator n=7 Tax=Lactobacillus RepID=Q03CT7_LACC3 Length = 289 Score = 200 bits (508), Expect = 6e-50, Method: Composition-based stats. Identities = 69/280 (24%), Positives = 130/280 (46%), Gaps = 5/280 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + L++++KK+ DY++ +S LA AG S +SV + A++L + Sbjct: 1 MSVKGNYQSTRSELSETEKKIVDYVMAHSQAVLTMSVHDLAKAAGTSPASVSRAARRLQF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ LK+ L+ L +I+ + L + +KL+ + ++ T++ +E Sbjct: 61 SGYNELKMQLAADLKGDTNQSD---DQEIQKNATLTTIKQKLLIDANQSLRETVDQINEA 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS-P 179 + + ++ + R+++ G+GAS L AQN A K ++G+ D++ L + Sbjct: 118 NVDTIINLIHQSDRLLVFGVGASYLAAQNIAQKWGRLGYPCHFSDDLNLFLPLAATADVE 177 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE-EQATN 238 L IS +G E+ LAA + G +V+ T N+L + A + T E Sbjct: 178 QTLCWFISNSGESPEVVLAAKLAKKAGLQVIVTTKLGKNSLTKYADVSIQTSQPMEARNR 237 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 A+ + H Q ML D+L+ A + + + A S+A V Sbjct: 238 FAATQSLHTQFMLIDILYYAYVSRYYDAAKIATDQSKAAV 277 >UniRef50_C7REF2 Transcriptional regulator, RpiR family n=2 Tax=Anaerococcus RepID=C7REF2_ANAPD Length = 279 Score = 199 bits (507), Expect = 8e-50, Method: Composition-based stats. Identities = 81/281 (28%), Positives = 153/281 (54%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M ++I++R + SD K+A Y+L +P ++SQ+LA+ G SQS++++F QK+GY Sbjct: 1 MTYTIKIKERSEDFTPSDTKIAKYILDKPGEVIKINSQKLADLTGTSQSAIIRFVQKIGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG+ +LKL ++++L + + + I DD + + EK +++ T + E+ Sbjct: 61 KGYTSLKLDIAKSLENDEINLKSEV---ISADDKVGDIIEKSKINVISSIEKTYALIDED 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ + + + A + L GIG+SGLV ++F +KL + G A D H L+ + D Sbjct: 118 QISKAIDNIVYANFVYLAGIGSSGLVCEDFLYKLQRSGKKAFYETDAHTNLSLLTNIKED 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DLL+ I+YT + +E+ +AA+ +G K+++IT L + + E+ Sbjct: 178 DLLICITYTALSKEVLIAAEYAKTIGAKLISITKAGRGKLANMSDILIPIPEIEKKMRYG 237 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +IS+ A ++TD+LF I ++++ + + S+ L KL Sbjct: 238 AISSRFASQIITDILFYGYISKNMDEVVKNLMVSKELTDKL 278 >UniRef50_B9CM70 Transcriptional regulator, RpiR family n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CM70_9ACTN Length = 283 Score = 199 bits (506), Expect = 9e-50, Method: Composition-based stats. Identities = 71/277 (25%), Positives = 129/277 (46%), Gaps = 4/277 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +R+R L+ +++LA++LL P A ++ Q+A G++ S+V KF QKLG++G Sbjct: 6 IRVRVRALESSLSDKERQLAEFLLADPHKASKMTISQIAQTLGMADSTVFKFTQKLGFEG 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F + L+ P V IH I + + E + + + ++ T + SE+ + Sbjct: 66 FRDFRGELAAE----GFDPEVSIHEHITHKSTPKQMAETVFESSIRSLTDTKELFSEQDI 121 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 ++ ++ G+G S +VA + K ++ A D H L S+ DD Sbjct: 122 IHAAKLIEDCYQLTFYGMGGSSVVAADAYHKFLRTPKRVAYDADFHLQLMRASRSNGDDC 181 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L +S++G + A+++ VG + IT + L A CL TIAEE A S S+ Sbjct: 182 ALLVSHSGRCIQTIQIAEKLREVGASTIVITSNPSSPLTALADACLVTIAEETAYRSESL 241 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ +Q L D L+ ++ D A ++ ++ Sbjct: 242 ASRISQLALVDALYTIVMFSDENAASRSLKEVREVIS 278 >UniRef50_D2PUN7 Transcriptional regulator, RpiR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PUN7_9ACTO Length = 294 Score = 199 bits (506), Expect = 9e-50, Method: Composition-based stats. Identities = 64/261 (24%), Positives = 113/261 (43%), Gaps = 1/261 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RIR L +++++A+ +L P + QLA + S ++V +F + LG G Sbjct: 4 IETRIRGLVPTLTPAEQRVAEQVLADPLGTHRGTIGQLAERSRTSLTTVTRFCRALGMAG 63 Query: 63 FPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + L+ AL+ ++ I DDP++ V L+ + A+ T + Sbjct: 64 YQELRFALATEAGEASSRDWTLGAAADIGPDDPMQSVLANLVATDVRALQETASQLDLAV 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V + +ARR+ L + S V + +L ++G D+H LA+ P+D Sbjct: 124 AEQLVDAITTARRVDLYAVSGSAAVTNDLQRRLHQLGITCHLWIDVHDALASATLLGPED 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS++G E+ G A+T F +A+ A L T A E S S Sbjct: 184 VAIGISHSGETIEVIEPLTAARDAGAVTAAVTNFPRSAITSVAGLLLTTSAREATYRSGS 243 Query: 242 ISACHAQGMLTDLLFIALIQQ 262 +S H Q ++ D L + Q+ Sbjct: 244 LSGRHTQLLVIDCLVTGVAQR 264 >UniRef50_C1PED1 Transcriptional regulator, RpiR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PED1_BACCO Length = 289 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 68/279 (24%), Positives = 131/279 (46%), Gaps = 4/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N +L+I+ + L++S+KKL +Y+L + ++ +LA +AGVS ++VV+F + +G Sbjct: 6 NIILQIKSKLTSLSKSEKKLGEYILSHAVETVNDNTSELAKKAGVSPATVVRFCRSIGLS 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ L + I+ I ++ + ++ +KL ++ T N+ Sbjct: 66 GFSQLKIRLYADASGGL---DREIYTDITPNEDITMIADKLALRFNQSITQTANLLETSC 122 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + M+ + I + GIGAS + A++F K +IG D H L +++ +S D Sbjct: 123 IEKITAMVDKSPAIYVYGIGASHVAAEDFTHKFSRIGKPVVHTLDHHLLGSSLINASKDC 182 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE-QATNSA 240 + +AIS +G E + G + IT + L L E SA Sbjct: 183 MFVAISNSGETNEAIKLTQIAKQNGLFTVGITQKRDSTLASIVDAPLIHHGGEAVLLRSA 242 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + ++ AQ D+L+ A + + R+++S+ ++ Sbjct: 243 ATTSLAAQLFTIDVLYFAYVAKHYHEIMGRLKNSKINIQ 281 >UniRef50_Q38YX9 Gluconate operon transcriptional regulator, RpiR family n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Q38YX9_LACSS Length = 280 Score = 199 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 70/278 (25%), Positives = 136/278 (48%), Gaps = 5/278 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +R Y ++ K++ADY+ + + L+ Q+ A GVS +++ +FA+ LG+ Sbjct: 5 IDSLLRSYYDNFSEKYKQIADYIFQESQFNQRLTIQEFAANCGVSTATISRFAKILGFDN 64 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F A K+AL E+ + P+ ++I +D + EK+ N+ A+ AT ++ +EE+L Sbjct: 65 FQAFKMAL-----LAKEANTSPLFHEINANDTFTTMAEKIFSSNSNALKATWSLLTEEQL 119 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V ++ A + L G+GASG+VAQ+ K ++ +D H L + D Sbjct: 120 QKAVALINRAHLLSLFGLGASGIVAQDGYHKFLRTSIPTVFNQDYHLQLMQATKLTNQDC 179 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + IS++G ++ A + ++ IT F ++L + L +I+EE + ++ Sbjct: 180 AIIISHSGQNKDALELARILKERQVPLIVITSFGNSSLAKLGDITLLSISEETNYRAEAL 239 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A AQ L D LF+ + + + + + A + + Sbjct: 240 HALIAQISLIDSLFMMVAVNNGQETEQSFKEIRAEIDR 277 >UniRef50_A8UBX8 Phosphosugar-binding transcriptional regulator, RpiR family protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8UBX8_9LACT Length = 285 Score = 199 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 77/280 (27%), Positives = 133/280 (47%), Gaps = 5/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LL IR++ L QS+KK+A+ +L P +S+ LA EAG S ++V++F + +G K Sbjct: 4 NVLLTIREKKITLPQSEKKIAETILRDPVKVIQMSATDLATEAGSSSAAVIRFCRSIGIK 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LKL LS + ++ I D+ L V +K++ T NV ++ Sbjct: 64 GFTELKLQLSAD----SQGIKDNLYTDILADENLEQVKKKMLINTNHLFKETNNVLDTKQ 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + +L + I L G+GAS +VA + K ++G D H L+ ++ + + Sbjct: 120 IERVSELLHESSIIYLYGLGASHIVASDIQQKFSRMGKIVVCSLDQHLLVTSMAVAGENA 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSA 240 + +S +G ++E+ +G K +A+T T NAL A L T A E S Sbjct: 180 VFFGVSNSGEKKEVLALMIMAKELGLKTVALTNNTENALSLEADIALKTAFAHEAPLRSG 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + Q D+LF ++ +L + S+A +++ Sbjct: 240 ATISLLTQMYAVDILFYDYASKNYDLTVTNLEKSKAAIQR 279 >UniRef50_Q03YQ8 Transcriptional regulator n=4 Tax=Leuconostocaceae RepID=Q03YQ8_LEUMM Length = 284 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 68/279 (24%), Positives = 134/279 (48%), Gaps = 2/279 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + ++R + + +++KL D+++ AR + Q+++ +GVS +++ +F +K+G + Sbjct: 4 NIIAQLRAQRKQYNTTEQKLIDFIINHVSEAREANIQEMSELSGVSTATISRFVKKIGLE 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F ++L+ A SV + +I D V +K+ A+ AT++ + + Sbjct: 64 SFREFSVSLASAATQMAA--SVDLFGEIADTDDTIAVAQKVFGGAENALAATVSNLTATQ 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L E L SARR+ GIG S +VA N K ++ + A D L + +D Sbjct: 122 LDEATLALISARRVGFFGIGGSSIVAFNAYHKFLRTPIDVIAHPDYDVQLMQAVKLNSND 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + IS++G ++ L A ++ K++A+T F + L + A L ++AEE S S Sbjct: 182 TAVVISHSGRNKDTLLIAKKLHEQHVKIIAVTSFKDSPLAKLADLVLLSLAEEVNFRSES 241 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +S+ AQ + D LF + + + ++++ Sbjct: 242 MSSLIAQLTIIDTLFTLVGSHLSQDTQSVVDTMRDVIEE 280 >UniRef50_A4EAC5 Putative uncharacterized protein n=2 Tax=Collinsella RepID=A4EAC5_9ACTN Length = 283 Score = 198 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 73/260 (28%), Positives = 120/260 (46%), Gaps = 2/260 (0%) Query: 15 AQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEAL 74 + +++ + Y+ P LS + LA+ S SS+++F ++LG+ G+ + L L Sbjct: 17 SPAERNVIAYVSAHPHEVVGLSVRGLADVTFSSPSSILRFCKRLGFAGYKEFQRELIAEL 76 Query: 75 ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARR 134 A + V + + I DD + + K++K N + AT L C L+ AR Sbjct: 77 ALLGDKKDVALED-ISMDDSVERIVGKVMKSNVRTIEATARTLDYTVLERCAARLKRARA 135 Query: 135 IILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRE 194 + L GIGAS LVA + A KLM++ D H L + D+ +A SY+G+ +E Sbjct: 136 VNLFGIGASRLVAHDLAQKLMRVDKECRLYDDWHDQLLCAKNMHEGDMAIAFSYSGLTQE 195 Query: 195 LNLAADEMLRVGGKVLAITGFTP-NALQQRASHCLYTIAEEQATNSASISACHAQGMLTD 253 + E R V+A+T + L A L A E S ++++ AQ M+ D Sbjct: 196 VLDCTAEAQRHNCPVVAVTKVDGSSKLATMADAVLGVAASEPLVRSGAMASRMAQLMVVD 255 Query: 254 LLFIALIQQDLELAPERIRH 273 L+ A + D E A I+ Sbjct: 256 ALYAAYVASDYERATHVIKQ 275 >UniRef50_A6T0F7 Transcriptional regulator, RpiR family n=2 Tax=Oxalobacteraceae RepID=A6T0F7_JANMA Length = 286 Score = 198 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 62/279 (22%), Positives = 118/279 (42%), Gaps = 5/279 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L IR +Y L++S+KK+A +L QP+ A + LA +A VS+ +VV+F + +G+ G Sbjct: 2 LLDSIRTQYDSLSKSEKKVALAVLEQPELAIAENITALAKKAEVSEPTVVRFCRAIGFDG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + A KL L++ LA +D + +K+ + + N + Sbjct: 62 WQAFKLKLAQGLALA----PGTGDESPMLEDMAADLVDKVCNRSINTLLDLRNSLDANAI 117 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + +L A I G G SG++A + K + G A D H D+ Sbjct: 118 EQALQVLGRANTIEFYGQGTSGIIAADAQHKFFRSGVPTVAYSDPHIHSIAASLLKKGDV 177 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++AIS G L + G ++ + + L + A+ + I Sbjct: 178 VVAISQRGSSLSLLRSVQLARSSGAAIVVL-APSGTPLAELATVLIPIDLHFHTDPYTPI 236 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 SA A ++ D+L + L + +++ +++ ++K Sbjct: 237 SARLAHLVVIDILAVGLALRLSPERRKKMLNAQKALQKF 275 >UniRef50_C3JIB3 RpiR-family transcriptional regulator n=2 Tax=Rhodococcus erythropolis RepID=C3JIB3_RHOER Length = 291 Score = 197 bits (502), Expect = 2e-49, Method: Composition-based stats. Identities = 78/277 (28%), Positives = 135/277 (48%), Gaps = 2/277 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L RIR L+ ++ ++A+ + P A L+ LA A S ++VV+ A++LG++ Sbjct: 12 DLLARIRASLSSLSPAELRIAEIIEADPSLASTLTVNDLAERASTSTATVVRTAKRLGFE 71 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L+LAL+ ++ ++P+ I D V KL + + + T + Sbjct: 72 GYPQLRLALAA-ISGSGTENTIPLGVDIVAADSAGEVMAKLAEFESEQLKGTAQLTDPAA 130 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L E V+ +RSARR+ + GIGASG+VAQ+ KL +I N D A + + PDD Sbjct: 131 LEEVVSRIRSARRVEVYGIGASGIVAQDLTLKLSRIDVNCRVHLDRDAAMVSASLLGPDD 190 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS++G ++ R G AITG + L ++ H L T E SA+ Sbjct: 191 IAVGISHSGETSDVVEPLALARRTGASTAAITGGARSTLAVQSHHVLLTAGREFGFRSAA 250 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +++ Q ++ D +F + A ++ S + Sbjct: 251 MASRTGQLLVVDTIFAMVAHSLP-SALSALQRSHDAI 286 >UniRef50_Q03HR4 Transcriptional regulator, RpiR family n=2 Tax=Pediococcus RepID=Q03HR4_PEDPA Length = 270 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 68/278 (24%), Positives = 136/278 (48%), Gaps = 14/278 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + + Q+Y L++ ++K+A ++ P + ++ L+ +A VS ++V +F +K+GY Sbjct: 1 MNIIDVVEQKYPSLSRQERKIALKVVQHPADVKKMNINTLSKKAEVSTATVTRFVKKMGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F KL L+EA ++ I + + +++ + T +++ Sbjct: 61 PDFSQFKLGLAEATSN------------ITENVDNAPLPDQVTDFYNQMITGTWKRINQK 108 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L++ ++++A R+ + G+G+SG AQ + +LM++G NA A D H + + D Sbjct: 109 TLNQVAMLIKNAPRVFIFGLGSSGYNAQELSQRLMRMGINAFAPSDSHTMYISSSIMQKD 168 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DLL+ +S +G E+N A + KV++IT F + L + + + L E N+ Sbjct: 169 DLLIVLSVSGKSNEVNEAVAVAKQHQLKVVSITAFDDSPLAEMSDYQLSVQYSEFVDNTQ 228 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 I++ + D+L L+Q E R + + A + Sbjct: 229 FINSQLGVVYIIDILSTMLLQN--ETYKARYQQTVAAI 264 >UniRef50_Q2J8J9 Transcriptional regulator, RpiR family n=1 Tax=Frankia sp. CcI3 RepID=Q2J8J9_FRASC Length = 293 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 62/260 (23%), Positives = 114/260 (43%), Gaps = 4/260 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RIR L+ +++++A +L P H S +LA +G S ++VV+F Q LG +G Sbjct: 18 VLERIRALSASLSSAEQRVARQVLADPVAMIHQSVSELAQVSGSSPATVVRFCQSLGLRG 77 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + LKLAL + +++ D + K++ +A+ L Sbjct: 78 YQELKLALIRE----TLPVERQLVDEVSAADGPDEIAGKVLGGAASALTEAARGIDGGVL 133 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 ++ +A R + +G S +A + A++L +G +A D H T + + DL Sbjct: 134 AAIADLVVAAPRTLFVAVGTSAPLAMDAAYRLTTVGVDARFAGDAHVQHVTARMLAAGDL 193 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 +A+S+TG E A + G AIT F + L + H + + E A ++ Sbjct: 194 CVAVSHTGSTAETLAAMRAAVDAGAHTAAITSFARSPLTELVRHAVVVGSRETAYRIEAM 253 Query: 243 SACHAQGMLTDLLFIALIQQ 262 ++ + D LF ++ + Sbjct: 254 TSRIVHLSVLDALFALVVVR 273 >UniRef50_C0CU66 Putative uncharacterized protein n=2 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CU66_9CLOT Length = 285 Score = 197 bits (501), Expect = 3e-49, Method: Composition-based stats. Identities = 64/279 (22%), Positives = 118/279 (42%), Gaps = 1/279 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L+ IR Y L + +KK+ADY+L P ++ +L+N GV ++V +F + + Sbjct: 5 NLLISIRSCYDRLTRLEKKVADYVLQHPQEVVKMTINELSNSCGVGDTTVFRFCRSMNVG 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ KLAL+ + ++ + + L + +++ T A+ TL+ + Sbjct: 65 GYQDFKLALALS-SNVNDMLDSKGEFNLAQSHDLHELAQQVSGVFTDAVNETLSSLDYDA 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V + +AR + L G G SG+ A ++M+I N D+H L + D Sbjct: 124 ISRTVEAILNARSVHLFGFGNSGVSALMMQNRMMRILPNIFYTSDVHMQLTSAATMQEDS 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + +G+ ++ A G + IT F A L + A E S Sbjct: 184 VAIIFCNSGITKDSIRIAQMTHEAGAFTVFITKFMQTPAAPYADVLLCSGATEGPIQGGS 243 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 IS +Q + LL+ L ++ A E + + + Sbjct: 244 ISGVASQMYIVMLLYSELFRRMETRAQENKIKAAHAIAE 282 >UniRef50_C6JFM8 Transcriptional regulator n=2 Tax=Clostridiales RepID=C6JFM8_9FIRM Length = 285 Score = 197 bits (501), Expect = 3e-49, Method: Composition-based stats. Identities = 71/282 (25%), Positives = 124/282 (43%), Gaps = 1/282 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L I ++Y L +S KKLADY+ ++LS LA VS++++ +F + LG Sbjct: 4 SILDSITEQYHSLTKSGKKLADYVFSHTTETQYLSITSLAENCKVSEATITRFCRGLGLS 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ A KLAL++A + S + +D + + K+ N ++ + + EE+ Sbjct: 64 GYNAFKLALAQADRTTDLGDSSNSAEPVSSEDSISTICAKVHAANLLSLNESYALYDEEE 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + +++L S+RRI G G S ++A + N + D H + + + D Sbjct: 124 MSKAISILSSSRRIYCFGQGGSMIMAMEAWARFSTASPNFVHICDSHMQASAIAMADSKD 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L SY+G R++ V+ IT F +A + AS L E S S Sbjct: 184 AILFFSYSGSTRDMCDTLQIASSRHVPVILITHFPKSAGAEFASVVLQCGYNESPLQSGS 243 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV-KKLV 282 ++A Q L D LF Q + + + KL+ Sbjct: 244 VAAKVGQLFLIDCLFYGYCSQKPDTCSAARSATAHAIANKLL 285 >UniRef50_A9NEV7 Transcriptional regulator, RpiR family n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NEV7_ACHLI Length = 281 Score = 197 bits (500), Expect = 4e-49, Method: Composition-based stats. Identities = 65/281 (23%), Positives = 133/281 (47%), Gaps = 2/281 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ +L + + + L+ +++ + DYL+ + S +++A A S +SVV+ +KLGY Sbjct: 1 MSVMLNMLKNKEALSMAERIVLDYLIENKTLLKDFSVEKIAEAAYTSPASVVRMCKKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF K+ A + + + I D +K I+ N A+ T+N+ E+ Sbjct: 61 NGFKDFKIDFILANSKVEIPETSEYTDVILIKDQNNG--KKAIENNIRALEETINLYDEK 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + +++ +AR+I++ G G+S LV ++ KL +I A + H + Sbjct: 119 TYTKAASLIMNARKILIFGKGSSFLVCKDLEMKLRRINKFCVAQGESHDQFVDASFINNK 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ IS +G +E+ +A +++IT + L + LYT A E SA Sbjct: 179 DVVIFISNSGKTKEIISSALLAKENKTPIISITRIGSSILADISDVVLYTSALESEFRSA 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++++ +Q + D L+ D++ + + + + +KK Sbjct: 239 AMTSRISQMSVVDALYAKCAYTDIDRSIQALETTYRTIKKF 279 >UniRef50_C8JWL0 Phosphosugar-binding transcriptional regulator n=3 Tax=Listeria monocytogenes RepID=C8JWL0_LISMO Length = 273 Score = 197 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 65/282 (23%), Positives = 127/282 (45%), Gaps = 10/282 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L I + L++S++K+A +L PD +LS LA A V +S++V+F++K+G Sbjct: 1 MDLLATISSYFPSLSKSEQKVAQLILSNPDEVENLSINDLALMANVGESTIVRFSRKIGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+AL + SQ ++ + D + + ++ + T + +E Sbjct: 61 TGFQDLKIALVKYQTSQKQNIT----------DESNEAKDLVYRQFVDGLQDTKSFIEQE 110 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 KL + M+ A + + +G S +A + +L ++G V D H V Sbjct: 111 KLEQAAKMIHRAEHVYILSVGTSAFIAMQLSNRLKRLGKFVEFVPDGHLQSIYVTMVKKT 170 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ IS +G +E+ + + G V+ ++ F + + Q L ++E +++ Sbjct: 171 DIVIGISKSGNTKEVIQNIELASQSGAPVVTLSNFINSKISQMGDVSLVASSKEFLSDAG 230 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 S SA +Q L D L L+ + + + K + Sbjct: 231 SFSAEVSQLYLLDTLIKVLVDINPSSYHNIRSLTNKALVKRI 272 >UniRef50_C0R285 Transcriptional regulator n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0R285_BRAHW Length = 285 Score = 196 bits (499), Expect = 6e-49, Method: Composition-based stats. Identities = 75/281 (26%), Positives = 141/281 (50%), Gaps = 2/281 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L IR +Y+ +++ KK+++Y+L P L++ ++ GVS +SVV+FA+ LG+ Sbjct: 1 MNAYLIIRDKYEDFSKAYKKISNYILSNPKEVIKLTALDISKNCGVSSASVVRFAKDLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG LK++++ + + I+ I DD + + K++ ++ +E Sbjct: 61 KGLDELKISIAS--KNGDDDNKYNINTIISADDNVEELCNKIMLLIKSSNEDFFYQLDKE 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + ++R+AR I + GIGAS L A + KL + FNA D H + + Sbjct: 119 ALEKAFKLIRNARNIYMLGIGASSLSAYDLFHKLKRANFNAFFYEDAHLNAEFFNYLTEE 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++A SY+G E+ ++A+T N L + A + E+ T Sbjct: 179 DVVIAFSYSGRTNEVIYPVKIASSKKASIIAVTRKKTNNLSKMADVLITVPNNEELTRMG 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +I++ ++ +++DLL+ IQ+D E E + ++ L ++L Sbjct: 239 AITSKYSSLIVSDLLYFGAIQKDFENIKENLINTSILTREL 279 >UniRef50_A8RZI5 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RZI5_9CLOT Length = 294 Score = 196 bits (499), Expect = 6e-49, Method: Composition-based stats. Identities = 59/279 (21%), Positives = 126/279 (45%), Gaps = 2/279 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +L IR + Q + K +A+Y+L + + LA E+ VS+++V +F + +GY+ Sbjct: 14 IVLDIRSKMQDFNPAQKAVANYILNNFYDMEGMPIRDLAVESEVSEATVSRFVKAMGYEN 73 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + A +L ++++ A + S+ + ++ +D + K+ + N A+ TL V + L Sbjct: 74 YRAFQLEVTKSKAER-RKGSLKGYAEVTEEDNAPGICRKIFESNIQALQDTLTVIDYDAL 132 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 ++ ARR+ + G S + A + +L ++G D H P+D+ Sbjct: 133 ERAADLIARARRLCIFAQGRSKVTANSIRLRLHRLGIEGTLYTDPHEQAIASSLMGPEDV 192 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL-YTIAEEQATNSAS 241 + IS G R + ++ G ++ +T + L++ A L +E S Sbjct: 193 AVGISTFGRSRSILVSIRRAAARGSSIIGVTSYQNTPLEKEADILLRTVNNDEADFGSEP 252 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A Q ++ D L++ + ++ A ER + + +++ Sbjct: 253 SCASVTQMVMLDCLYMLVAKRMEGKAEERFKITRDAIQQ 291 >UniRef50_B5FDJ7 Transcriptional regulator, RpiR family protein n=48 Tax=Gammaproteobacteria RepID=B5FDJ7_VIBFM Length = 283 Score = 196 bits (498), Expect = 8e-49, Method: Composition-based stats. Identities = 107/282 (37%), Positives = 166/282 (58%), Gaps = 2/282 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L +I+ + L+ + K+ D++L P + SSQ LA + GVSQSS+VK Q+LG+ Sbjct: 1 MNILEKIQNQRSNLSSNGIKILDFILDDPASISSYSSQALAAKVGVSQSSIVKLTQRLGF 60 Query: 61 KGFPALKLALSEALASQPES--PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 KGF A KLA+ E L + P PIHN+I DD + +KL++E T A+ AT N + Sbjct: 61 KGFTAFKLAIIEDLGRKQAILEPERPIHNKINSDDSSLTIAQKLVQEKTHALIATTNAIN 120 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 + T+L A+RI + GIG S L A++ A+KL+KIG A +D H +AT + Sbjct: 121 FSEFELVTTLLNQAQRIQIVGIGGSALTAKDLAFKLLKIGMTALTEQDSHVQIATANTLT 180 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D+ + ISY+G R+E+ +AA + G V+A+T + L++ A+ C+ TIA+E+ Sbjct: 181 KQDVQIVISYSGSRKEILMAAQTAMDKGATVIALTSTKKSPLRKLANFCIDTIADERQFR 240 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 S+SIS+ AQ ++TDLLF+ L+Q + A I + + + Sbjct: 241 SSSISSRTAQNVITDLLFMTLLQIKSDKAKLLIDEISSTMNR 282 >UniRef50_Q2SNY6 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SNY6_HAHCH Length = 285 Score = 196 bits (498), Expect = 9e-49, Method: Composition-based stats. Identities = 63/280 (22%), Positives = 132/280 (47%), Gaps = 5/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +RQ L +S++K+A+ +L P+ H+ LA EAGVS+ ++V+F + + + Sbjct: 6 DILSWLRQNRDTLRKSEQKVAECVLRNPNDVIHMRIVDLATEAGVSEPTIVRFCRTICFD 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F + K++L++ LAS D L+ +G K+ + +++ N + ++ Sbjct: 66 SFQSFKVSLAQQLASMQRQTPFRAR----SGDSLQQLGAKIFSDVQSSLQQVFNQLAWDR 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + + ++ R+ G GAS VA + K ++ + A D + +D Sbjct: 122 IEQACAWISNSPRLYFFGYGASAAVAADAQQKFFRLKPSTHACPDPDTQMLIAGLVETND 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++AIS++G L + + G KV+AI+ +AL A+ + +E A Sbjct: 182 VIIAISHSGRTNNLIQSCMQARASGAKVVAIS-PPQSALANIANLNIGVSVDENADAFTP 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +++ A M+ D + L Q+ E +++ ++ + L Sbjct: 241 LASRLAHLMILDTIASNLFQKLDEQHVQKLNQAKKNLSSL 280 >UniRef50_C2D9G3 RpiR family transcriptional regulator n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9G3_9ACTN Length = 285 Score = 196 bits (498), Expect = 9e-49, Method: Composition-based stats. Identities = 58/280 (20%), Positives = 129/280 (46%), Gaps = 5/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + +I+ A+ ++ +A ++L +++ +LA++ GV+ S++ KFAQK+GYK Sbjct: 5 SVTAKIKSLLPSCAEKEQAIAQFILQHVRETSYMTIHELADKLGVADSTIFKFAQKMGYK 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF + L P V +H I D L + + + +++ TL + +E+ Sbjct: 65 GFRDFRNDLLTEAYD----PEVSVHEHITTRDSLATIAATIFHSSVTSLHNTLALLNEDN 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L ++++ +A + G G S +VA + K ++ + D H + D Sbjct: 121 LKRALSLINNAHTLTFFGCGGSNIVAADAYHKFLRSPLHCQNAIDEHIQIMQASLLGAQD 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS++G+ R A+ + ++ IT + + + A + +EE S S Sbjct: 181 VAIIISHSGLSRTTLQIAEILRENRVPIIFITSYLNTPITRFADVVFISASEETGYRSES 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAP-ERIRHSEALVKK 280 +++ AQ ++ D LF A++ + + + + + + + + Sbjct: 241 LASRVAQLVILDTLFCAVMFKSDDKNVAQTLHNIRSAINR 280 >UniRef50_Q6AH41 Transcriptional regulator, RpiR family n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6AH41_LEIXX Length = 289 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 75/280 (26%), Positives = 132/280 (47%), Gaps = 2/280 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +RQ L+ ++ ++A ++ P L+ +LA SQ+S+ +F Q L Y Sbjct: 3 DVLSAVRQAVPRLSATEARIAQTVIEHPQRVVDLTIAELAAVCDASQASIARFCQALRYS 62 Query: 62 GFPALKLALSEALASQPESPSVP--IHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ +LA++ A + + + ++I D L+ V K+ + T A+ T Sbjct: 63 GYREFRLAVAAATSREQATRERFELTESEIDPSDSLQEVVAKIAYQETLAIERTARELDA 122 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E L V + +A R+ L GIG+S L AQ+ KL +IG A D H L++ P Sbjct: 123 EALDAVVAAIIAASRVDLYGIGSSILTAQDLQQKLSRIGLTAFCSVDSHLALSSAALQKP 182 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 ++ +A S++G RE N A G +AIT +++ + L T A E S Sbjct: 183 GNVAIAFSHSGETRETNHALAVARAAGATTVAITNVPESSIAAVSDLLLMTQARENFYRS 242 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++++ AQ L D LF+ + Q+ + + +R + V+ Sbjct: 243 GAMASRTAQLALVDFLFVRVAQRLYDQMTDSLRLTYEAVR 282 >UniRef50_A8UCF6 Phosphosugar-binding transcriptional regulator, RpiR family protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8UCF6_9LACT Length = 292 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 127/277 (45%), Gaps = 1/277 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +R + ++K +AD+ + + + LA++ G+S++++ KF +K+G+ G Sbjct: 6 LEKLLRPYIKSFNDTEKIIADHFIKLGHDVVNKTLSNLADDTGLSEATIFKFVKKIGFDG 65 Query: 63 FPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 FP K++++ + + + + + I +D + +KL+ N A+ + EE+ Sbjct: 66 FPNFKISVASNFQNIEERKNELTVFSDISKEDSSYAIAQKLVYSNKLALDNLIGSLDEER 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 +++ + ++ ++ I G GAS ++A + K ++ F + D H L+ P+D Sbjct: 126 INQALNLIYDSQTIHFFGQGASSVIALDSYHKFLRTRFLCNYISDYHMQLSYATKLGPND 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + S++G E A + ++ +TG L + +S +EE A S + Sbjct: 186 CVFLFSHSGETNETIEVARILRNNQVNIIVLTGNHHTDLVKLSSISFVVDSEESAFQSET 245 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +++ + D+L++AL+ D + + + Sbjct: 246 LTSRILYLTIIDILYVALMYHDEAKNKDSLEKIRKAL 282 >UniRef50_B6G0W9 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G0W9_9CLOT Length = 310 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 57/278 (20%), Positives = 130/278 (46%), Gaps = 1/278 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RI +Y L++S+KK+AD++ A L+ +++A EAGVS+ S+++F++ +G G Sbjct: 31 LLFRIATKYMALSKSEKKVADFIKNFNGKAEKLTMKKVAKEAGVSEPSIMRFSKSIGLDG 90 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK L + + I +D + ++ K++ + + L S + Sbjct: 91 FNELKYCLMKTKKDDEGTMKPLHGFDINREDTIDMIPGKIVMTVENQINSMLESISLKSY 150 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + + +A+ + + + S A + A KL+ +G N D + + + +D+ Sbjct: 151 SDMINCIINAKNVDIYSVENSVSSANDLATKLLYLGINVKMYTDSYLQKISAYNLTSEDV 210 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + ISY+G ++ + G + IT + + + + A + T +++ +I Sbjct: 211 AIGISYSGNSKDTVEMIKTAKKRGATTVVITNYKDSKIVKYADILICTSSDQMLYGD-AI 269 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + Q ++ D++++ +I D + E + +E ++ Sbjct: 270 FSRAIQLVINDMIYMGIIHSDYDKYIEILNKNEKAIRN 307 >UniRef50_Q040R4 Transcriptional regulator n=8 Tax=Lactobacillus RepID=Q040R4_LACGA Length = 283 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 74/281 (26%), Positives = 137/281 (48%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ ++ Y + KK+ADYLL P T +Q L S +S+++F Q+LG+ Sbjct: 1 MDLSTKVLNNYPNFKGASKKIADYLLAHPKTFLQEDAQGLGKMTKTSAASMIRFCQQLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG ++ L++ P+ I + D +V +KL+ T ++ Sbjct: 61 KGLKDFQIQLAQD---TPQDNEETIDPIVDHHDNPHIVLQKLLSSIEKNTEQTAHLIDGL 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L++ + L++A RI L G+GAS L AQ+ +K ++ N +D+H L + S Sbjct: 118 ALNQAINFLKNADRIYLAGVGASSLPAQDLYYKFIRSDKNVVFNQDIHIALERICYSHST 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D L+ SY+G+ +E+ L AD+ + ++ +T + L + A L +E+ Sbjct: 178 DALVIFSYSGLTQEILLMADQARKNHTPIIVVTRSRQSPLVELADVVLGVSTDEKLLRVG 237 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +I++ ++ ++ +LF+A I Q+L ER R +E + +L Sbjct: 238 AINSLFSEMFVSSVLFLATINQELPRLEERFRETELITNQL 278 >UniRef50_A0Z4E2 Transcriptional regulator n=3 Tax=Bacteria RepID=A0Z4E2_9GAMM Length = 291 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 68/277 (24%), Positives = 117/277 (42%), Gaps = 5/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L +I+ GL++SD K+A +L P+ A H S LA +A VS+ SV +F ++LG Sbjct: 6 NVLTQIQAALPGLSKSDTKIAHVVLADPEAATHASIALLAQQANVSEPSVNRFCKRLGAT 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P K+ L+ +L + I + +D + KL+ A+ + Sbjct: 66 GYPDFKIWLARSLVAG----VRYISQVVDPEDTVTTYPGKLVDNTVNALLLAREQLPLKT 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V L +A RI G+G S VAQ+ K + D L S D Sbjct: 122 LEVAVEHLDAAGRIYFFGMGTSAAVAQDAEHKFFRFQTPVTTHTDPLMLRMLAAGGSQGD 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS+TG + AA G V+++T + L Q + + A E + Sbjct: 182 VFVFISHTGRTEAIVDAAALASASGATVISLTA-QDSPLAQVSHCVIGLEAPENTEDYLP 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +++ ++ D+L + + E E + + + Sbjct: 241 MTSRIVHLVIIDILVTGVTLKRGEPCIEHLARIKESL 277 >UniRef50_B5HLI6 RpiR-family transcriptional regulator n=3 Tax=Streptomyces RepID=B5HLI6_9ACTO Length = 317 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 81/279 (29%), Positives = 129/279 (46%), Gaps = 1/279 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 ++R + +S ++A+ + P L+ LA G S+++VV+ A+ LGY G Sbjct: 35 LAAKVRTLGPSMTRSMHRVAEAVAADPAGCAALTVTGLAERTGTSEATVVRTARLLGYPG 94 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + L+LAL+ A Q + I I DDP+ V KL + + T +L Sbjct: 95 YRDLRLALAGLAAQQQSGRAPAITTDIAVDDPIADVVAKLAYDEQQTLADTAAGLDTAQL 154 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V SARRI + G+GASGLVAQ+ KL++IG A A D H + D+ Sbjct: 155 GAAVAATASARRIDVYGVGASGLVAQDLTQKLLRIGLIAQAHSDPHLAVTNAVQLRSGDV 214 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA-EEQATNSAS 241 +AI+++G ++ G +AITG A+ Q A H L T E A+ Sbjct: 215 AIAITHSGATGDVIEPLRVAFEHGATTVAITGRPDGAVTQYADHVLTTSTARESELRPAA 274 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +S+ +Q ++ D LF+ + Q+ E A + S + Sbjct: 275 MSSRTSQLLVVDCLFVGVAQRTYETAAPALAASYEALAH 313 >UniRef50_B9NXN7 Bifunctional protein glk n=2 Tax=Rhodobacteraceae RepID=B9NXN7_9RHOB Length = 320 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 113/278 (40%), Gaps = 5/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + + LA ++K+ADY+ + ++ LA VS+ +VV+F + LG + Sbjct: 33 DLIPALHNSQTKLAVQEQKVADYVKDHLNEISSMTIGNLAERCSVSKPTVVRFCRSLGCE 92 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF KL L++ +A + ++++ A + E+ Sbjct: 93 GFRDFKLRLAQNVAVSAQYLYRNAG---DESSDANSAIDQVLGALFATLDVMRGQIDTER 149 Query: 122 LHECVTMLRSARRIILTGI-GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L E R+I+ GI G S LVAQ + + ++G + V D + L A + Sbjct: 150 LEEARDACLDRRQILFAGIGGGSSLVAQEASNRFFRLGIPSFFVNDSYVLQMRAAALGLE 209 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L +S +G + AA+ G ++IT L + L T E + Sbjct: 210 DVLFLVSASGEADAIVSAAEVANGYGATTISIT-KPNTRLSDISKIALLTELPEDSDIYK 268 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++ +A + D L + + Q+ + E +R A + Sbjct: 269 PTASRYAHLAIVDALAMTVAQEMTDETKENLRRIRASL 306 >UniRef50_C5C1Y9 Transcriptional regulator, RpiR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C1Y9_BEUC1 Length = 307 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 70/279 (25%), Positives = 125/279 (44%), Gaps = 1/279 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +R+ L S ++ A+ +L P + + LA +G S S+V + ++LG G Sbjct: 17 ILAELRRLLPDLPDSVRRTAERVLADPVASVAGTITDLAEASGTSPSAVSRLCRRLGVDG 76 Query: 63 FPALKLAL-SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 +PAL++A+ ++A AS + I I D L V L + A++ TL + Sbjct: 77 YPALRIAVVADATASASSPWEIDISRTIGPTDSLEDVAGTLGAATSRAVHDTLAGLDLDV 136 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + + ARR+ L G+ S ++ +L +IG + D+H L P D Sbjct: 137 LRDVAHAVAGARRVHLYGVSGSAVMTAELQLRLHRIGIATWSFADVHEGLTGAALLGPGD 196 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + +A+SYTG E +A+TG ++L A L T+ EE Sbjct: 197 VAIAVSYTGETIETLEMLRAAGSRDALTVAVTGAPRSSLAAVADRILVTVTEETTFREGP 256 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++A ++ + +LL++A+ Q E E + + V++ Sbjct: 257 LAARFSELTVVELLYLAVGQLTYERTTELLTQTALAVRR 295 >UniRef50_Q03Q61 Transcriptional regulator n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03Q61_LACBA Length = 286 Score = 194 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 123/279 (44%), Gaps = 1/279 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + +IR Y L++++KK+A L P ++ ++LA+ GVS +++ +F +++ Y Sbjct: 4 STIGKIRGTYDQLSRTEKKVAQMALNTPAVVSEMTIKELASATGVSTATISRFVKRMDYA 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + +AL+ LA + ++ D L + K +++ AT SE+ Sbjct: 64 NYREFTMALA-HLAIEDGGEHQSSFPELAEGDSLATIANKTFHYTISSLEATNEALSEKD 122 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V L +A ++ G+G S + A + K ++ + D L S D Sbjct: 123 LARAVLKLINAEKVTFFGLGGSSIAALDGYHKFLRTALSVTYYPDFDIQLMQAARLSDQD 182 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + IS++G E +E+ R ++AIT ++ + L Q A ++ +E S Sbjct: 183 CAVVISHSGRNSETLQVVEELQRNDVSIIAITSYSGSPLAQAADVTFLSLTDEVNYRSEG 242 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + +Q + D LF+ + + + ++++ Sbjct: 243 MYSLISQLAILDTLFMMTVLRVSSRTGNVMTKVHDVIEQ 281 >UniRef50_A8SDH7 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SDH7_9FIRM Length = 281 Score = 194 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 66/277 (23%), Positives = 121/277 (43%), Gaps = 4/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N ++Q L +S + +A+YL+ A++LS LA E V++++V +F + LG++ Sbjct: 4 NFWELLQQHQGDLTKSGRTVAEYLVQHAAEAQYLSISSLARECQVAEATVFRFCRALGFE 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ +++AL++A A+ D + E A+ T N S + Sbjct: 64 GYHEMRIALAQANATGVLVNQQEP----APDADTATLCEHASALFMTAINGTQNALSPQA 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V +L SAR++ G G S A+ + I AV D H + + D Sbjct: 120 VDQAVALLHSARQVFCMGQGGSMAAAKEICARFACITNKFRAVADSHMQVMAASLMTEQD 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++L +SY+G R+L G K++ IT + + + A L A+E +S S Sbjct: 180 VVLFVSYSGATRDLMETLRTAKANGAKIILITHYEDSPGAKLADIVLLCGAQESPLDSGS 239 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 I A + ++L + I D + E + + Sbjct: 240 IPIKVAVLYVAEVLVLRYILDDKPGSTEAQERTTEAL 276 >UniRef50_C0X1P6 Transcriptional regulator RpiR n=21 Tax=Enterococcus RepID=C0X1P6_ENTFA Length = 285 Score = 194 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 62/283 (21%), Positives = 131/283 (46%), Gaps = 13/283 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + I + Y L +S++K+AD++L ++ + + + +A V +++++F QKLG+ Sbjct: 14 MNYIYLINEHYPLLTKSERKVADFILNSGESIIYSTMNDIKTKANVGDATIIRFCQKLGF 73 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+ +++ S+ + +++ K + +T + +EE Sbjct: 74 SGFSDLKIEIAKEDFSKKKEQPSSGKYH-----------DEVAKSLIEVLQSTSCLINEE 122 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 KL + + ++ A + + G+G+SG + + +++G A AV D H + Sbjct: 123 KLTKAIQLINQASSLYIFGVGSSGNTSLDLESMFLRVGIQAKAVLDPHYQAQVASLLTDR 182 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++ S +G ++ + G K+LAIT + + + + A L T EE N Sbjct: 183 DLVIIFSLSGKTKDTYDSLKIAKNNGAKILAITNYIHSPIGKSADLVLQTAIEE-FLNGG 241 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRH-SEALVKKLV 282 S++ +Q + DLL Q + + + +++ K + Sbjct: 242 SLAGKISQLYICDLLVHEYEQNNKINSLDLREKVLRSIIDKRI 284 >UniRef50_C1IBM1 Phosphosugar-binding transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IBM1_9CLOT Length = 266 Score = 193 bits (491), Expect = 5e-48, Method: Composition-based stats. Identities = 57/280 (20%), Positives = 128/280 (45%), Gaps = 14/280 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L ++++Y + +K +ADY++ D ++++ LA E G S +++ +FA+K+G Sbjct: 1 MDILCEVQRKYNEFSDKEKDIADYIMQHGDKIKNINITDLAKEIGTSGATITRFAKKIGC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F +K+ L + + + + + T + +E Sbjct: 61 DSFVDMKIKL-------------GSNKVELPINDEDGIFSYTYQYYNEVIERTKMLIDKE 107 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ + V ++ A+ I + G+G+SGL + +L+++GFN + D H ++ S + Sbjct: 108 EIFKVVNEIKKAKNIYIYGVGSSGLTCKEMMQRLLRMGFNVHCISDSHMMIINSSIVSEN 167 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++ IS +G +E+ + + G K+++ITGF + + + + S Sbjct: 168 DLVIGISISGETQEVIHSLRKSKENGAKIVSITGFEGSTVSKYSDIKFIVYNPNFVDRSR 227 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 I+ + L D L ++ +D+ L+ + A++ Sbjct: 228 FINTQFSAMYLLD-LISMVLLKDINLSNKMQTTINAIINN 266 >UniRef50_C2H8J8 Bifunctional RpiR family transcriptional regulator/sugar isomerase n=16 Tax=Enterococcus RepID=C2H8J8_ENTFC Length = 286 Score = 193 bits (491), Expect = 5e-48, Method: Composition-based stats. Identities = 63/280 (22%), Positives = 138/280 (49%), Gaps = 6/280 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + RI + + ++KKLA+Y++ + +++ +LA +G+S +VV+F++K+G+ Sbjct: 5 MSVISRIESMMEDYSSAEKKLANYIIGNIEKVPTMTANELAEASGLSAPTVVRFSKKIGF 64 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + K+ +S L + + I ++ + KL A+ T+++ EE Sbjct: 65 QSLTDFKITISTELQTG----IDEGFSDIEANESFYSIKNKLGNNAQVAIKETVDILEEE 120 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + V L +A + L G+GAS LV ++ K ++G +D+H LL + ++ Sbjct: 121 TIQKVVECLETAESVFLYGVGASSLVVEDILQKWSRVGKPIIFEKDIHVLLPQLVSNEKK 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE-EQATNS 239 +L +S +G ++ A+ + +++A+T F N L + A + T E S Sbjct: 181 KVLWLVSNSGRSTDVVALAELAKNMNIEIIALTQFGNNPLSKIADVLVQTSRPKEITNRS 240 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 A+ ++ AQ D++F + ++ E E+++ + ++ Sbjct: 241 AATNSLLAQFATIDIIFYFYMAKN-ESLSEKVKKTREAIQ 279 >UniRef50_Q1WQV4 Transcriptional regulator, RpiR family n=4 Tax=Lactobacillus RepID=Q1WQV4_LACS1 Length = 274 Score = 193 bits (491), Expect = 5e-48, Method: Composition-based stats. Identities = 66/278 (23%), Positives = 133/278 (47%), Gaps = 11/278 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L I + L++ ++K+A +L P + ++ +LA +AGVS +++ +F +++ Sbjct: 1 MNLLNNIEAIFSTLSRQERKVALKVLQNPQEVQSMNITKLAKKAGVSNATITRFVRRMEC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F KL L+ + AS PE P +G+K+ + + T + Sbjct: 61 SDFHDFKLKLAISAASSPEVPVS---------SESDSMGDKVYEFYQKVLQGTWKQLDTD 111 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +H V + ARR+ + G+G+SG AQ F +L+++G A D H + + D Sbjct: 112 TIHNIVHAITKARRVYVYGLGSSGYTAQEFTQRLIRMGIAAFCTVDSHMMFIDSTIVNSD 171 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++AIS +G ++N+A + G K+++ITGF + L + ++ N+ Sbjct: 172 DVIIAISQSGNTDDVNVACSLAKQKGTKIISITGFYQSPLIELSTWSAVVKNSNFVDNTR 231 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 I++ A + D++ + L+++ + + L+ Sbjct: 232 FINSQLAIVYVIDIITMELMEK--SEYSSTMNKTVELI 267 >UniRef50_A2RL41 Transcriptional regulator, RpiR family n=4 Tax=Lactococcus lactis RepID=A2RL41_LACLM Length = 283 Score = 193 bits (490), Expect = 6e-48, Method: Composition-based stats. Identities = 71/280 (25%), Positives = 136/280 (48%), Gaps = 3/280 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ LL IRQ Y +KK+ADY+ + S+Q++A+E G S +++V+F++KLGY Sbjct: 1 MDTLLIIRQNYSNFTTVEKKIADYIFEVGEKMLEKSAQEVASEIGSSSAALVRFSRKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK LS + A + + ++ + + KL + T S++ Sbjct: 61 DGFSQLKQKLSASYAVHED--DEDYYKEVNDSETPSSIKNKLKVRVNHMVETTNAALSDD 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ V ++ A I + GIGAS +VAQ+ K +IG ++D H ++++ S Sbjct: 119 EIMAAVALIDEAESIFVFGIGASSMVAQDIFQKFSRIGKQVFFIQDAHLFVSSLSISDRK 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY-TIAEEQATNS 239 + + IS G +E+ A + + ++AIT + L Q + + L+ E+ + Sbjct: 179 TIFIGISMKGETKEVIELARVVRGMEIPIIAITSREESTLGQMSDYILHSVSGEDYQMRT 238 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 A+ + AQ + D+LF + + + +++ + +K Sbjct: 239 AATMSLMAQLYVVDILFYMFVSEHFTESYDKLEKTRDAIK 278 >UniRef50_D0RS60 RpiR family transcriptional regulator n=2 Tax=Lactobacillales RepID=D0RS60_9STRE Length = 277 Score = 193 bits (490), Expect = 8e-48, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 120/279 (43%), Gaps = 14/279 (5%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L I Y L +KK+ADY L LS+Q ++ VS S+ +FA+K G+ Sbjct: 4 NILPVIESVYGSLTHLEKKIADYFLSAEALTADLSAQAVSQRLYVSVPSLTRFAKKCGFS 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ E+ + R + ++ + + T ++ EE+ Sbjct: 64 GYRQFIFEFQESSSESKNV--------------SRDLTRNVLSDYGELLNKTFSLIDEEQ 109 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 ML +A R+ + G G+SGLVA+ ++ M++G A+ D H + +PD Sbjct: 110 FLRVGDMLNNAGRVYIYGQGSSGLVAREMEFRFMRLGMVCKAITDDHMIRMNRVMLNPDC 169 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++ IS +G + + A +VG K + +T + L+Q+ + ++ + Sbjct: 170 LVIGISISGETKIITQAIQNAKKVGAKTVLVTSNNSDDLRQQCDELVLVAVKKHLAQGNN 229 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 IS ++ D+ + + D + + ++ + +++ Sbjct: 230 ISPQFPVLVVMDIFYAYYMDLDRDHRSQIFTNTLSALEE 268 >UniRef50_C5BVH6 Transcriptional regulator, RpiR family n=2 Tax=Actinomycetales RepID=C5BVH6_BEUC1 Length = 299 Score = 192 bits (489), Expect = 9e-48, Method: Composition-based stats. Identities = 73/278 (26%), Positives = 128/278 (46%), Gaps = 1/278 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L R+ L S++++A+ +L P + +QLA G S++SV +F + +G G Sbjct: 16 VLTRLPGLLPTLRSSERRIAEAILDDPQAVSRDTIEQLAARCGTSKTSVTRFCRTIGLAG 75 Query: 63 FPALKLALSEAL-ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + L+LAL+ + + ES + + +P +V ++L+ N A+ T+ Sbjct: 76 YTELRLALAGDVGRRRDESWRAELGSSADPQNPADVVVDELLTANVRALTETVRTLDRAA 135 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V L SA RI L GIG SG VA + + +IG A A + H L D Sbjct: 136 LAASVDALASAGRIDLYGIGGSGTVAADLQRRFHRIGRVAHAWSESHDALTGAAMLGASD 195 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + +A+S+TG E+ A G +A+T + +A+ A L T A E+ + Sbjct: 196 VAIALSHTGETSEVAAALALARDRGATTIAVTNYPGSAVAAAADLVLVTAAHEERARADG 255 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ HAQ + D L++ + + + +R + V+ Sbjct: 256 LAGRHAQMFVVDCLYVLVAGVLHDESQSGLRRTSEAVR 293 >UniRef50_C8SX74 Transcriptional regulator, RpiR family n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SX74_9RHIZ Length = 314 Score = 192 bits (489), Expect = 9e-48, Method: Composition-based stats. Identities = 59/275 (21%), Positives = 112/275 (40%), Gaps = 5/275 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + ++ Y L ++++++AD +L A S+ LA AGVS+ +V +F + +G + Sbjct: 27 DIISLVKDSYSELRRAERRVADVVLDDVKYAVDASNAALAQRAGVSEPTVTRFCRAIGCE 86 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G KL L+++L + + E A+ + Sbjct: 87 GLRDFKLKLAQSLVVGALYLAKSPAPG---SGNGMPFWNAVFGEARRALQEAERQLDPVE 143 Query: 122 LHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + ++ AR++ + G+G S +AQ ++L + G A D + + T P Sbjct: 144 LQKAAELIAKARQVTVFGLGGSSSALAQETQYRLFRYGITVNAQCDPYLMRMTASTLKPG 203 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++AIS TG RE+ A + + +T L + L E Sbjct: 204 DLVIAISATGRTREVIEAVELAKHYRANAIGVTA-PDTELARACDVRLAVAVPEYPDTLK 262 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 ++ +A + DLL +A + A E +R + Sbjct: 263 PTASRYAFLAMIDLLAVASAYKLDASARETVRRIK 297 >UniRef50_C0X148 RpiR family transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X148_ENTFA Length = 295 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 63/280 (22%), Positives = 133/280 (47%), Gaps = 3/280 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RIR + L+ ++KK++DY + ++ + LANE GVSQSSV +F +K+GY G Sbjct: 6 LDQRIRIKKPNLSLTEKKISDYFVHSESLLTQMTLESLANEIGVSQSSVYQFVKKIGYSG 65 Query: 63 FPALKLALSEALASQPESPSVPIHN---QIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 F K+ ++ QP +V N I DD + +K+++ N ++ ++ Sbjct: 66 FQEFKIDIARNSNYQPTFQNVNSVNGADDISPDDDSITIAKKVLQANIYSLSNATQFLTK 125 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E L + ++ SA+ + G G S +VA + K ++ + + D H L+ V + Sbjct: 126 ELLDNVLALMYSAKTLHFFGQGGSSIVAFDSFHKFIRTNYRCNYIFDYHMQLSFVTKLTS 185 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +D + S++G +E A ++ + K++ +TG + + L + + + EE + Sbjct: 186 EDCVFIFSHSGKTKESINLARQVKKTNAKMITLTGNSGSELAGLSDEAIIVVTEEGLFRA 245 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S+++ + + D+L+ + + + + ++ + Sbjct: 246 ESLASRISYLTVMDILYTNTMYHNFDQNADSLKKIRDNIS 285 >UniRef50_A4WDW6 Transcriptional regulator n=10 Tax=Enterobacteriaceae RepID=A4WDW6_ENT38 Length = 274 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 64/262 (24%), Positives = 120/262 (45%), Gaps = 12/262 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LLR+RQ G + + +KL ++L P +L+ +LA E+ S++SV + + LG K Sbjct: 6 NLLLRLRQGVSGYSPTQQKLGSFVLNDPSRVLYLTITELARESDTSEASVTRLCRTLGCK 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ K+AL+ + + +++++E+ A+ T + E Sbjct: 66 GYTEFKMALALDVQREHVPLKKGDE------------IDEIVEESILALQDTSRLLDREI 113 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + L +R + + G+ AS ++ +KL+++G A DMH + DD Sbjct: 114 LLKAAQALHQSRSVYIYGVAASAIIGDYLHYKLLRLGKPAQLFSDMHRASMNATTLTSDD 173 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++AIS +G R+L + G VLA++ + L + L E ++ + Sbjct: 174 LVVAISSSGSTRDLLHVVKLARKRGAHVLALSNTPRSPLTSLSDMLLVAAKPEGPLSAGA 233 Query: 242 ISACHAQGMLTDLLFIALIQQD 263 ++A +L +LL +I D Sbjct: 234 LNAKVGVMLLVELLATTMISLD 255 >UniRef50_C9L6X6 Transcriptional regulator, RpiR family n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L6X6_RUMHA Length = 297 Score = 192 bits (487), Expect = 1e-47, Method: Composition-based stats. Identities = 72/281 (25%), Positives = 133/281 (47%), Gaps = 6/281 (2%) Query: 1 MNGLLRIRQRYQ--GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 M R+ + ++++K+A YLL D + H + +LA+E GVS +S+V+F + + Sbjct: 17 MGCRERLIDKRDGEHTKKTERKIAAYLLGNFDKSLHSTLLELADEIGVSDASIVRFCKSI 76 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 GY GF K+ A Q + + DD + +K+ ++A+ T Sbjct: 77 GYTGFQEYKI----NAALQSVPEPRLYNPSLSVDDNPAEICDKIFAIESSALEQTKQELD 132 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 +++ +L ARRI L G G S + A++F KL+KIG A D L + + Sbjct: 133 ISVMNKVADVLLKARRINLVGTGGSAISARDFQHKLLKIGVRAELQEDKDLQLMSASLLT 192 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 +D+L AIS++G + + + K++ +T + N L ++A + LY ++E+ Sbjct: 193 EEDVLFAISHSGSNLHVAETIELAQKRNAKIITLTMKSKNILVEKADYPLYVVSEKTIFE 252 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S S SA AQ + D L + ++ + + E ++ + Sbjct: 253 SESFSARLAQLAMLDCLVALMAFKNFDGSLEAMKATRIATS 293 >UniRef50_C2HLD1 Transcriptional regulator n=3 Tax=Lactobacillus RepID=C2HLD1_LACAC Length = 284 Score = 192 bits (487), Expect = 1e-47, Method: Composition-based stats. Identities = 63/277 (22%), Positives = 134/277 (48%), Gaps = 5/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N I+ + L + ++ L DY++ P+ S Q+L+ + G+S +++V+F +++G Sbjct: 3 NIFSIIKGKKSQLPKKEQLLGDYIIANPENVISSSIQKLSKDTGISTATIVRFCREIGTN 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LKL L A S + +++ + + + + +A+ AT + ++ Sbjct: 63 GFSDLKLQLVAA----QSSVNNNDYHEFDAGEGIAAIKNTMAARFESAIEATQSGLNDNS 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V + ++ I++ G GASG+VA + K M++G N + D+H LA + + + DD Sbjct: 119 VEKAVRKIYNSSSILVYGAGASGIVASDMYQKFMRVGKNINYISDLHVALAQLASFTSDD 178 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSA 240 LL+ IS G E++ + G L +T + + ++A L T E + S Sbjct: 179 LLILISNDGKTTEVSDIQKVADKFGIPTLLLTANPRSFVAKKADLVLLTQDIGEPSIRSG 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + ++ +Q + D+L + + + ++++ S Sbjct: 239 ATTSLISQMFVVDVLVFSYVSVHSDEVLKKLKRSNEA 275 >UniRef50_B9YAK0 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAK0_9FIRM Length = 364 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 57/281 (20%), Positives = 130/281 (46%), Gaps = 2/281 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L +++ + +K + +Y++ P+ ++ + LA E S+S++ +F +K GY Sbjct: 81 MSFFLELQKNHSS-TPVEKSIINYIINHPNEVIEMTMEDLARETYTSRSTISRFCKKNGY 139 Query: 61 KGFPALKLALSEALASQ-PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 +GF +LK+ L+ L + S D + + + ++T ++ T+ N Sbjct: 140 EGFNSLKMQLAIELNLFLKDEMSSSTSLLFEKGDNASSIIDNITSQDTYSIIETVRTNPV 199 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E + + + + R ++ G+ SG++A + + ++G +L + P Sbjct: 200 EHIEKLADKILNCRHVVFLGVQFSGIIAYDAHLRFSRLGIPCKYFNTECDILTYSYFADP 259 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+++ SY+G + AAD + G + ++T N L + + LY + + N+ Sbjct: 260 QDVVIIFSYSGKTAVILEAADHIRGKGTFLASVTKNYNNELLEISDLHLYINSIDDPENN 319 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 S+S+ A L D+++ L+ + + +++ + L KK Sbjct: 320 LSLSSRIAALCLVDMIYAVLVNKKSDNFYDKLMQTNKLYKK 360 >UniRef50_Q28KP3 Transcriptional regulator, RpiR family n=6 Tax=Alphaproteobacteria RepID=Q28KP3_JANSC Length = 306 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 85/247 (34%), Positives = 136/247 (55%), Gaps = 1/247 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L ++ + L+ D+++AD +L PD LSS +LA AG SQSSVVKF QKLG+ Sbjct: 27 SILTIMQAQLPTLSAGDRQIADTILGDPDRMARLSSGELARAAGRSQSSVVKFCQKLGFS 86 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ L+LA++ A A+Q +H+ I D + +KL+ A+ TL++N + Sbjct: 87 GYQDLRLAVTRAAATQKAPNDA-VHSSIEVSDDASMTAQKLLASKIHALQETLSINPAKN 145 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L L A R+ L+G+GAS LVA++F +KL K+G + D H +A +PDD Sbjct: 146 LDAARDALNGAARVQLSGVGASSLVARDFVYKLQKLGISVLFDADSHIQMAHSATLTPDD 205 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L+++S +G E A+ + G ++ +TG PN L A L T+ +E S++ Sbjct: 206 VLVSLSQSGFSLETLRIAEAAAKRGATIITVTGLHPNPLADVADKALCTVTDEDQVRSSA 265 Query: 242 ISACHAQ 248 I++ AQ Sbjct: 266 ITSRDAQ 272 >UniRef50_A1BB20 Transcriptional regulator, RpiR family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1BB20_PARDP Length = 280 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 69/267 (25%), Positives = 114/267 (42%), Gaps = 3/267 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RIRQ +++++A+ +L P TA S A A VS+ S+++F ++L G Sbjct: 15 MLDRIRQSLASFTPAERRVAEAVLDTPSTAITWSISDAARIAKVSEPSIIRFCRRLDCDG 74 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 FP +L L++ LA +P DDPL + + + + A+ L Sbjct: 75 FPDFRLKLAQQLAKHQPAPQPLARPGSGNDDPLAAMVDDIFQRAGQAIEEARRDLDLGAL 134 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V ML ARR+ + G G+SG +A +L + A A D + + P DL Sbjct: 135 RAAVAMLGKARRVDIYGYGSSGFMASEAQHRLAALAIPAVAYSDPTLQMHSAPLLGPGDL 194 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA-EEQATNSAS 241 L +S++G+ L + + G VLAI+ + + A L A + + A Sbjct: 195 LFVLSFSGLTSYLISNIEIARKAGAPVLAISPK-GSIVASLADVNLNLNAYRQSSGRMAV 253 Query: 242 ISACHAQGM-LTDLLFIALIQQDLELA 267 + A L D LF A+ ++ Sbjct: 254 PTGRVAPMYVLLDALFAAMAEEMGGEH 280 >UniRef50_B7RLA4 Transcriptional regulator, RpiR family n=1 Tax=Roseobacter sp. GAI101 RepID=B7RLA4_9RHOB Length = 317 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 56/278 (20%), Positives = 109/278 (39%), Gaps = 5/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + +R+ LA ++K+A+Y+ + ++ +LA VS +V++F + LG Sbjct: 30 DVISALRRHDGHLATQEQKVANYVKAHLEDISAMTIAELAGHCDVSTPTVIRFCRTLGCD 89 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF KL L++ LA + S + D +++ A+ E Sbjct: 90 GFREFKLRLAQNLAVSMQYLSADPQPEPADGDTA---INQILGGIYASANVMRRQIDPEV 146 Query: 122 LHECVTMLRSARRIILTGI-GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + L R ++ GI G S V+Q A + ++G + + D + L Sbjct: 147 LDRAKSALLKTRHLLFAGIGGGSSNVSQEAANRFFRLGIPSFSTSDSYILQMRAATLQAG 206 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L IS +G + AA+ G + IT + L + + E Sbjct: 207 DVLFLISASGEADAIVGAAEIAGGYGATTICIT-KSGTRLANVCNIPILIDLPEDRDIHK 265 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++ + ++ D L +++ Q E +R A + Sbjct: 266 PTASRYIHMIIVDALAMSVAQDLAHETTENLRRIRASL 303 >UniRef50_B1R0U2 Transcriptional regulator, RpiR family n=9 Tax=Firmicutes RepID=B1R0U2_CLOBU Length = 284 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 55/277 (19%), Positives = 120/277 (43%), Gaps = 3/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I Y +++KK+ADY+L ++ +LA AG S ++V +F +K K Sbjct: 6 SIIDTIYAEYNSFFEAEKKIADYILKYGTKLIEMTISELAEAAGTSDATVTRFCRKCNMK 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ L++ L+ + + + + ++ ++ M T+ +EEK Sbjct: 66 GFHHLKITLAKELSESQKEDTRVSGDVSE--ENIKESLNNILFNKIEEMKQTILTINEEK 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 E + +LR+A + +G + VA + +K ++G + A +A +D Sbjct: 124 FKEILQILRNAGIVQFVAVGNTIPVALDGCYKFNQVGVASVANTIWETQIAYTYNLKEND 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++AIS +G + L + G +AIT + L + +++ + T E+ Sbjct: 184 VVIAISNSGASKRLIDVIEIAKEKGAVTIAITNSDKSPLAKLSNYHIKTATREKLFLEEY 243 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + + + ++LF+ + + + E + Sbjct: 244 YFSRISAMTVIEILFL-FMTVGKHDVYKTLSRHEQSI 279 >UniRef50_Q0BBX6 Transcriptional regulator, RpiR family n=65 Tax=Proteobacteria RepID=Q0BBX6_BURCM Length = 324 Score = 191 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 120/279 (43%), Gaps = 6/279 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + RI + L ++++K+A Y+L A H S LA +AGVS ++V +FA+ +G + Sbjct: 38 DIVARIAECAPELREAERKVAAYILADLARAAHASIGALARDAGVSVATVTRFAKAVGCR 97 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 LK+ +++A A + P +V +++ A+ + Sbjct: 98 DVRELKVLVAQAAAVGQRFLVPSDAHPAEDASPASVVYDEI----RVALAHNHQLLRNTS 153 Query: 122 LHECVTMLRSARRIILTGI-GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L A+ + + G G S +A ++L++ G A+ +D S D Sbjct: 154 FDAAADLLAGAKMVYVYGQGGGSTALADELRFRLVRFGRPVASYQDSLLQRMVAATLSRD 213 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +++A+S +G EL + R G ++AIT + L + A H + +A E Sbjct: 214 AVVVALSVSGRVPELLESCRLAKRYGATLIAITA-PASPLAKLADHLIPVVAFETDFIYK 272 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ +A M D+L + + + E +R + + Sbjct: 273 PSTSRYAMMMAIDVLVTGVALRLGDAGRESLRRIKHALD 311 >UniRef50_D0XGH5 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0XGH5_VIBHA Length = 296 Score = 190 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 67/276 (24%), Positives = 126/276 (45%), Gaps = 4/276 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + IR R L ++++ +A+ L + S +++A GVS + +VK ++KLG+ G Sbjct: 20 VIPNIRMRMPSLTRTEQSIAENFLKPHFMQKSTSIKEVAERLGVSTALIVKVSKKLGFSG 79 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK AL+ S S Q++ DD + K+++ + A+ LN + Sbjct: 80 FKQLKDALNAHHHSD----SYAPSEQLQPDDSCEQIVTKVLQNSINALTEILNFVDANMV 135 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + +AR I L G S ++ ++F KL++ G A+ RD H +L + S D+ Sbjct: 136 SAAAEAIINARNIELYAAGGSNIICEDFQHKLLRFGIRASVPRDRHLMLMSASVLSEKDV 195 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 +L +S++G +L A + G +++IT L Q + + LY A + + Sbjct: 196 VLVVSHSGQTVDLMDAVRLAKQSGATIISITNNFHAELSQLSDYPLYAPASPEPLLGKNG 255 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 A + + D L+ + + + A E + + V Sbjct: 256 IARLVKLAMIDSLYATIASKIPDQAEENLEKTTKAV 291 >UniRef50_UPI000197BCAC RpiR family transcriptional regulator n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197BCAC Length = 283 Score = 190 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 60/274 (21%), Positives = 128/274 (46%), Gaps = 2/274 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L++R+ L+ +K++A+Y++ + +S Q LA E VS +++++ KLGY+G Sbjct: 2 IDLKLREARDSLSTKEKQVAEYIIANKKNMQSMSIQSLAQENKVSTTTILRLCHKLGYQG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK+ L ++ + + I +D + V K+ +++ T + + Sbjct: 62 FSDLKIDLISSINHKS--YGTLLQEDIDINDSMETVNHKVGLIEKSSIEETCALVNLNAF 119 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 ++ +++I++ G G+SGLVA+ F ++L+KI + D + V +DL Sbjct: 120 KLANELISKSKKIVIYGAGSSGLVAKEFEYQLIKIKKDVNCHLDYSIQFSIVNTLDQNDL 179 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ IS++G E + +AIT +++ A L+TI+ E + I Sbjct: 180 VIVISHSGENHECIKLLTLARELKVPTIAITKMGQSSVSSLAETVLHTISTEHVSRLIPI 239 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + +Q + ++L L + + ++ + A Sbjct: 240 RSKISQLTVINMLITNLFIKQYDERIQKQISTRA 273 >UniRef50_D2AGN5 Transcriptional regulator, RpiR family n=1 Tax=Shigella flexneri 2002017 RepID=D2AGN5_SHIF2 Length = 333 Score = 190 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 91/265 (34%), Positives = 150/265 (56%), Gaps = 3/265 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L +IR +++K+AD+L + + +SS+Q+A + G+SQSS+VKFAQKLG Sbjct: 68 MLYLTKIRNAESEFTGNEQKIADFLRARVSELKSVSSRQMAKQLGISQSSIVKFAQKLGA 127 Query: 61 KGFPALKLALSEAL---ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 +GF L++AL + + ++ +H+ I DD L ++ KL +E A+ T + Sbjct: 128 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALF 187 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 +L + + ++ A I +TG+G S LV ++ ++KLMKIG+ A D H QA Sbjct: 188 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 247 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 D+ +AISY+G ++E+ L A+ + G V+AIT + L++ A L T++ E Sbjct: 248 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLADSPLRRLAHFTLDTVSGETEW 307 Query: 238 NSASISACHAQGMLTDLLFIALIQQ 262 S+S+S AQ +TDLLF+ L+Q Sbjct: 308 RSSSMSTRTAQNSVTDLLFVGLVQH 332 >UniRef50_A8RDU7 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RDU7_9FIRM Length = 281 Score = 190 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 58/278 (20%), Positives = 127/278 (45%), Gaps = 2/278 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L+++R+ Y L+ S+ ++ Y+L +S+Q+LA ++ S ++V++ ++L Sbjct: 3 MSVLVKLRE-YHTLSNSENEVRMYILRNSKKVISMSTQELAAKSYTSPATVIRLCKRLEL 61 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQ-IRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 KG+ LK+ L+ + + + + D L + +K+ + ++ T + Sbjct: 62 KGYSELKIQLASEIKAFETMNLDVVDQTTFKKGDSLTELIDKVTDISIHSIEETRLLLDY 121 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E L + A I L G+GAS +A + +K M+IG + + + + S Sbjct: 122 EVLLCVARQIMDASIIDLYGVGASNNIAFDAGYKFMRIGKSISCLSLIDRQRIQAINSDS 181 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 + ISY+G E+ A + + ++ITG N L + L+ + E + Sbjct: 182 SHFAIIISYSGETPEIIEIAKILEKNNVPAVSITGSIQNQLVNLVEYNLFVSSRESNFRN 241 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 +I + + + DL++I I + + + +R+ + + Sbjct: 242 GAIVSRTSTLYMLDLIYITCISLNYDDSAKRLGQTLTI 279 >UniRef50_C6VNS3 Transcription regulator n=3 Tax=Lactobacillus plantarum RepID=C6VNS3_LACPJ Length = 292 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 62/278 (22%), Positives = 114/278 (41%), Gaps = 2/278 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L IR Y L+ +D+K+ADY++ P S LA GVS ++V +F +++ + Sbjct: 12 VLTLIRSYYPNLSVTDRKIADYIIADPIKTAAQSISDLAAAVGVSTATVSRFVKRISFSS 71 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F L+ A E + + + + E +++ T V +E L Sbjct: 72 FRDFSRELTA--AEPIEQTNAEAFQDVEKQTTFKGIAESTFNSIRSSLDQTSQVMTEADL 129 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V +L +AR I G+G S + A + K ++ G A D L + D+ Sbjct: 130 KRAVELLLNARSIGFYGLGGSAVAALDGYHKFVRTGIPCAHNSDYDMQLMQAAQMNASDV 189 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + IS+TG ++ + V+A+T F + L + ++ ++AEE S + Sbjct: 190 AVVISHTGRNQQTLQVLATLTSQSVPVIALTSFGNSPLAKDSTVAFISVAEEINYRSEGL 249 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ AQ + D LF+ E + + + Sbjct: 250 TSLIAQMSIIDSLFLMTAVHGNIEMAESLGRVREAISQ 287 >UniRef50_D1AYR1 Transcriptional regulator, RpiR family n=2 Tax=Fusobacteriaceae RepID=D1AYR1_STRM9 Length = 281 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 63/275 (22%), Positives = 139/275 (50%), Gaps = 1/275 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L+++R+ S+K +A +L+ + + ++++A E S S+V + +K+G Sbjct: 1 MSILVKLREN-NDFTSSEKDIAKFLMNNYKNIKKIDARKIAKETFTSVSAVTRTCKKIGL 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GF K+ L E LA+ + +++ I ++ R++ EKL K + +++ T + + Sbjct: 60 RGFQEFKIDLIEELANLEQQKLEFVNSDIERNNDTRMIIEKLNKLSISSLKETKLLQDPD 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + V +++ + I GIGAS +V + +K M+IG A S+ D Sbjct: 120 IIDKVVKLIKKKKVIDFYGIGASHIVCLDAQYKFMRIGKVCNAFGPFDLQYIQAVNSTDD 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +L + ISY+G+ ++ ++ + G + ++IT + N + A+H LY ++E SA Sbjct: 180 NLAIIISYSGMTEDIIKISEVLRNKGIETVSITMYGSNKVASNANHNLYVTSKESLKRSA 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 +I + + L D++++ + + +I ++ Sbjct: 240 AIYSRISMLNLIDVIYLKYSNMNFDEVSVKINETQ 274 >UniRef50_D1PSB4 Transcriptional regulator n=3 Tax=Clostridiales RepID=D1PSB4_9FIRM Length = 282 Score = 190 bits (482), Expect = 5e-47, Method: Composition-based stats. Identities = 66/282 (23%), Positives = 127/282 (45%), Gaps = 5/282 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N +R RY L +S +++ADYL + A++LS LA E GV+++++ +F + LG+ Sbjct: 5 NFWELLRSRYSELTRSGRRVADYLTRHAEEAQYLSISSLAAECGVAEATIFRFCRSLGFD 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ +K++L++A P+ +++ + A+ T +V + E Sbjct: 65 GYNEMKISLAQA----NAIPTAAGADKLEPGADTATLCTHASAVALEAINGTRSVLNPEA 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + T+L+ AR++ G G S ++A + + + D H P+D Sbjct: 121 IDAAATLLQRARQVFCFGQGGSQILANDIWARFATVSTKFRTAGDSHMQTIAASLMVPED 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++L ISY+G R++ + G KV+ +T + A L A+E + S Sbjct: 181 VVLFISYSGSTRDMMETLRIVKGNGAKVILLTHYADAPGTALADVVLLCGAKESPLDGGS 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK-KLV 282 I+A A + ++L + + ELA + + KL+ Sbjct: 241 IAAKIAVLFVAEVLVLRFTLDNQELAAIARERTSKALAPKLL 282 >UniRef50_B0NYS8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0NYS8_9CLOT Length = 282 Score = 190 bits (482), Expect = 6e-47, Method: Composition-based stats. Identities = 65/278 (23%), Positives = 117/278 (42%), Gaps = 5/278 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +I Y L ++KK+ADYL+ P A +S +LA+ SQ+++++F +K+G KG Sbjct: 7 VRDQIFSTYDSLYDAEKKVADYLISHPSEAIEMSVSELASHCDASQATIIRFCKKIGCKG 66 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK+ L+ Q E D + ++ + AT + + E+L Sbjct: 67 FHQLKIKLAGEQRQQEEQVISNE----IDIDQMDKSLNNIMISKVEEIKATFHNFNPEEL 122 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 E V ++ A I +G + +A + ++K ++G A + + A + D+ Sbjct: 123 REIVDLIIHANLIEFAAMGDTIPIALDGSYKFNQLGLKAVSSTIWESQEAFSRTLRKGDV 182 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 AIS +G + L + + G +AIT + + L + H L T E + Sbjct: 183 FFAISASGASKRLVKMVEIVKDNGVTTIAITNQSKSPLAELCDHVLLTATREHIFHDQVS 242 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A + D LF+ L + E + E V + Sbjct: 243 FTRMAAMSVIDTLFLLLFSTKWDSF-ENVAQHEQSVAE 279 >UniRef50_D0KLH9 Transcriptional regulator, RpiR family n=1 Tax=Pectobacterium wasabiae WPP163 RepID=D0KLH9_PECWW Length = 320 Score = 189 bits (481), Expect = 7e-47, Method: Composition-based stats. Identities = 76/277 (27%), Positives = 136/277 (49%), Gaps = 1/277 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 I GL+ +++ +A+Y+L P L ++LA E GVS++++V+F + +GY Sbjct: 35 KVRTYIANILHGLSDTNQTIANYVLQNPSMVAQLPVKKLAVEIGVSEATIVRFCKHIGYA 94 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G LK AL+ L S+P+ I +D V +K+ A+ T+++ + Sbjct: 95 GLLELKSALNRELFD-DSDLSLPVTPDILMNDTRHDVAQKIALTVDRAVKETIDLIDMQT 153 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 +++ V++ SARR++ G GASGL A K+ +IG ++ A D ++ + PDD Sbjct: 154 INQIVSLFISARRVMFIGFGASGLAALEARDKMNRIGIDSDAFTDRFSMTLKLANLKPDD 213 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++A S++G E+ A + G LAIT T + L ++ L T E + S Sbjct: 214 LVVAFSHSGETPEVVNAFKLAEKAGATRLAITHSTHSPLTSLGNYVLLTCGESERYQGDS 273 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 I +Q + + L L +Q+ + + +AL+ Sbjct: 274 IGTRVSQLFMIEFLCTELTKQNFKDFSSQSISIKALL 310 >UniRef50_A6LRG7 Transcriptional regulator, RpiR family n=2 Tax=Firmicutes RepID=A6LRG7_CLOB8 Length = 291 Score = 189 bits (481), Expect = 7e-47, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 130/279 (46%), Gaps = 5/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +I Y+ L +++KK+ADY++ + ++ +LA E+ VS++++V+F +K K Sbjct: 15 SVLDKILCIYKSLHEAEKKIADYIINNKERVIEMTVSELALESSVSEATIVRFCKKCDLK 74 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ +++ + + S + + + ++ + T+++ +E Sbjct: 75 GFYDLKIKIAKEMVNLKSSNISNE----LDSNNIMQSLQNILANKIEELKQTISMMNEGN 130 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + ++ AR + +G + VA + A+K ++G ++ LA + +D Sbjct: 131 IKRILEAIKGARIVQFAAVGNTIPVAMDGAYKFNQLGISSVTNTIWETQLAFSYTLTKED 190 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++ IS +G +EL + ++IT + + ++ + + T E+ Sbjct: 191 VVIVISNSGASKELVALLEIANERQATTISITNHENSPVANKSKYHINTSTREKLFLDEF 250 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + ++ ++L++ L+ +D E A I E + + Sbjct: 251 SFSRVSAMVVIEILYL-LLTRDKEDAYNWISQHEQSIAE 288 >UniRef50_P46117 Uncharacterized HTH-type transcriptional regulator in aarA 3'region n=5 Tax=Enterobacteriaceae RepID=YARA_PROST Length = 282 Score = 189 bits (481), Expect = 8e-47, Method: Composition-based stats. Identities = 61/282 (21%), Positives = 125/282 (44%), Gaps = 4/282 (1%) Query: 1 MN-GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M+ ++ ++++LA +LL D ++ +LA AGVS +SV++F +++G Sbjct: 3 MSTLTSKLESLLNRGKGTEQRLARFLLDSRDNFVAMNVAELAQAAGVSSASVIRFTRQMG 62 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 Y+G+ K+ L+ + + + + + D + K + A+ +L + Sbjct: 63 YRGYSDFKVD---YLSDEKQYKAESLSGSLNPYDDTEQIIAKSGQMFITAIEKSLELLDP 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + E + A+RI+L G+G S +VA + +KL+++ A D+H L+ Sbjct: 120 NTMDEIAQKIVEAKRIVLFGVGTSAIVAYDIFYKLIRVNKYALFSPDLHVQLSYSSNVDA 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DDL++AI+ G ++N + G + +T F + + A L +EQ + Sbjct: 180 DDLVIAITAKGNTPDINHMLKLANKKGCSTIVLTRFGQDEAVRLADLVLPYFYDEQLFQT 239 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 I+ Q ++ D LF + E ++ + +L Sbjct: 240 GVITPQVLQMVVFDTLFFKYLTLTNEDVVLALQKEREAIIQL 281 >UniRef50_Q71VW8 Phosphosugar-binding transcriptional regulator, RpiR family n=15 Tax=Firmicutes RepID=Q71VW8_LISMF Length = 268 Score = 189 bits (480), Expect = 9e-47, Method: Composition-based stats. Identities = 57/278 (20%), Positives = 123/278 (44%), Gaps = 15/278 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L I+Q Y L +K++A Y+L + D ++++ ++LA E G S S++ +F + + Sbjct: 1 MTILNEIQQNYNRLPNKEKQIAKYILEKSDELKNINIKELAEETGTSISTITRFCRHVRC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F LK+ + + + E++ + T+ + Sbjct: 61 DSFVDLKMRV-------------NTAATMVPSLGYDDLFEEVYSFYHKVIDNTVKLIEPA 107 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 K+ E V ++ A+R+ + G+G+SGL A + +L+++G N +V D H ++ T ++ + Sbjct: 108 KIREVVQYIQEAKRVYICGVGSSGLTAVEMSQRLIRMGLNVISVNDPHMMIITSSITTKE 167 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D ++ IS +G EL A + KV T F + + + + + + Sbjct: 168 DFVIGISNSGNTPELVTALKIAKKNKSKVATFTSFENSEMTEISDVTIPVYNTLFVSKRY 227 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++ + + D++ + L+Q E + + + V Sbjct: 228 FANSQFSIMYVMDIISMMLLQN--ESYRDNMEKTINTV 263 >UniRef50_Q03CI3 Transcriptional regulator n=10 Tax=Lactobacillaceae RepID=Q03CI3_LACC3 Length = 280 Score = 189 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 67/278 (24%), Positives = 123/278 (44%), Gaps = 4/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L++++ L+ +KKLA YL PD A + +L+ GVS +++ +FA+ LGY Sbjct: 3 DFLVQLQIYKPNLSGQEKKLAAYLQAHPDHASQANISELSQLTGVSTATISRFAKALGYT 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F AL++AL++ + ++ D + + +K+ N A+ TL + Sbjct: 63 NFQALRMALAQ----TSPEDDHALFAELSPKDSVDTLAQKIFTSNIDALRTTLANLDTDA 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + V + A + L G+GAS LVA + K ++ A D H L P D Sbjct: 119 LTKAVKWITHAEHLGLFGLGASNLVALDGYHKFLRTAIPVAYAADYHMQLMAATHLGPRD 178 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++ S++G ++ A+ + ++ ITG + L + A +AEE + + Sbjct: 179 AMILTSHSGEDKDAIALAELAKKQQVPLIVITGSPTSRLVKMADAAFVAVAEESRYRTEA 238 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + A A+ + D LF+ + R A + Sbjct: 239 LHALIAEISIMDTLFMISAIKTDSQTAPLFRQVRATID 276 >UniRef50_D0I0X8 Sialic acid utilization regulator RpiR family n=1 Tax=Vibrio cholerae CT 5369-93 RepID=D0I0X8_VIBCH Length = 282 Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 55/274 (20%), Positives = 125/274 (45%), Gaps = 6/274 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L R+R +G + K +AD+++ D+A++L+ +LA + S+++V++ + LG+K Sbjct: 8 NLLSRLRYGMEGYSPKLKTVADFIVSNADSAQYLTITELARDTMTSEATVIRLCRDLGFK 67 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ ++AL+ ++ + + + + + + ++ T + ++ Sbjct: 68 GYSDFRMALAIEISQPQFTKNNDVAKEDGDR------IDDATQSAITSLQDTSILIDRKQ 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 ++ M+ A I G+GAS +V + +++L +IG ++ D H S+P D Sbjct: 122 INRICQMIHQADNIHCVGVGASSIVGRYLSFRLTRIGKSSTMFEDTHIAAMRAVKSTPSD 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L AIS +G +++ A + V+++T + L + + E + Sbjct: 182 LWFAISSSGSTKDVVYVATRAKKQQSPVVSLTNIRHSPLSVTSDEVMVAARPEGPLTGGA 241 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 ++ + +L D+L L+ + E A +E Sbjct: 242 FASKVSALLLVDILINQLVAEHAEYAESVKDTAE 275 >UniRef50_B9DJX2 Putative RpiR family transcriptional regulator n=1 Tax=Staphylococcus carnosus subsp. carnosus TM300 RepID=B9DJX2_STACT Length = 288 Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 70/280 (25%), Positives = 130/280 (46%), Gaps = 7/280 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 ++ IR++ + L ++++ +A +LL P+ +S+Q L + S ++V++ A KLG+KG Sbjct: 6 LIIHIREQMKHLTKNEQHIAQFLLEHPEKVLEMSAQTLGDVTKTSSATVIRCAHKLGFKG 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LKL+LS L + +I D+ R + KL+ + T + ++ L Sbjct: 66 FVDLKLSLSRNL----PQHEAHNYKEIAQDESPREIKRKLLSRAAYTLETTEVLLEDQAL 121 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQ--ASSPD 180 V L ++I++ G+GAS +VA++ K + G D H L + + Sbjct: 122 EALVDKLYDVQKIVVFGVGASHIVAEDIYQKFTRAGMEVIQSADAHVLATVLAGYHKKDN 181 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT-IAEEQATNS 239 L + +S +G +E A G V AIT + + L A L + E++ Sbjct: 182 VLFIGVSNSGHNQETLRLAHVAHYYGATVAAITSRSDSKLAGEADIVLLHDASSEKSLRL 241 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 A+ S+ AQ M D+LF + +D + + ++ V+ Sbjct: 242 AATSSLIAQLMTVDILFYTYLSKDYQAHVAHLSETKKAVE 281 >UniRef50_Q1J2N3 Transcriptional regulator, RpiR family n=2 Tax=Deinococcus RepID=Q1J2N3_DEIGD Length = 290 Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 70/253 (27%), Positives = 116/253 (45%), Gaps = 5/253 (1%) Query: 20 KLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPE 79 ++ D +L+ P+ L+ +L+ AG S ++VV+ Q LG+ G+ KL LS ALA Sbjct: 28 RVIDQILMDPERFLSLTIAELSEAAGTSDATVVRLVQHLGFGGYQEFKLQLSRALA---- 83 Query: 80 SPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTG 139 S + D + K+ + A+ TL + E V + AR I L G Sbjct: 84 -VSRKADLTVEPQDASVTILRKIFDSSNTALDDTLEHLNLEAFSAAVQAMTLARHIELIG 142 Query: 140 IGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAA 199 +GASG+VA + ++ +++G + A D L+T P D+L+A+S++G R ++ AA Sbjct: 143 MGASGVVALSGQYRGLRLGLSCRASTDPGTFLSTCSLLEPTDVLIAVSFSGTRPQVVQAA 202 Query: 200 DEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIAL 259 + G V+A+TG L + H L A ++ Q + D LF +L Sbjct: 203 RLARQAGAIVVALTGLGRTPLSKVVHHTLTVSAPGDRYRPEGLATQIPQVAILDALFTSL 262 Query: 260 IQQDLELAPERIR 272 ER+ Sbjct: 263 HVAQDPYLSERLS 275 >UniRef50_C7HWK5 RpiR family phosphosugar-binding transcriptional regulator n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HWK5_9FIRM Length = 297 Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 50/277 (18%), Positives = 118/277 (42%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 I + +++ A+Y L D + + +A E S +S+ KF +KLG+KG Sbjct: 17 LERIILSKKSTFTKTENFYAEYFLKLDDEILNKTISNVAEETESSTASIFKFIKKLGFKG 76 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + +L L+ + + + + +D + K++ N +MY Sbjct: 77 YKDFQLNLATNINKNSDDSLLTAITSVNENDSPDEIANKIMAFNIQSMYTLKEDIKNIPF 136 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 C+ +++ +++I G+G S +A + K ++ + + D H L+ +D Sbjct: 137 ESCLNLIKKSKKIHFFGMGGSATIAYDSYHKFLRTKYMVNYISDSHMQLSACTKMDQNDC 196 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + S++G E+ + + K++A+TG + + + + + + E + S+ Sbjct: 197 IFVFSHSGRTLEVIEVSKVAKKNKAKIIALTGNPKSEMVKISDEAMILPSIESEHGTESL 256 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +A + D+L I+L+ ++E + ++ +K Sbjct: 257 NARILYLTVMDILLISLMYDNVEENKKYMKKRLDALK 293 >UniRef50_UPI0001BCD92E RpiR family transcriptional regulator n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCD92E Length = 288 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 58/268 (21%), Positives = 124/268 (46%), Gaps = 2/268 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +I Y L ++K+LADY+L ++ LA G S ++VV+F +K G Sbjct: 6 SILEKIFSIYPVLFDAEKRLADYVLQNEAKVVDMTVSDLAAACGTSDATVVRFCKKCGCN 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ +++ +A++P + + + + + + + TL Sbjct: 66 GFHHLKINMAKEMATKPSDGAPIVGSNELDCARMDVSLRNIFASKQEELRQTLAEIDPAV 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 V +R+AR I +G + VA + A+K ++G A + +LA + ++PDD Sbjct: 126 FRSVVERIRAARFIFCAAMGNTIPVAMDAAYKFNELGLTAISAPVWENMLAMMHTATPDD 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA-TNSA 240 +LLAIS +G ++L G ++ +T +++ + + L+ +++E+ + Sbjct: 186 VLLAISASGETKDLMRIVSAARGRGAYIVLVTNQVHSSIARVSDRVLHAVSQERMFFRTF 245 Query: 241 SISA-CHAQGMLTDLLFIALIQQDLELA 267 S S+ + + + ++ L+ + + Sbjct: 246 SFSSTRLSMTAVIEAVYYMLLSVKRDSS 273 >UniRef50_Q02YU6 Transcriptional regulator n=4 Tax=Lactobacillales RepID=Q02YU6_LACLS Length = 273 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 58/278 (20%), Positives = 117/278 (42%), Gaps = 11/278 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I+++Y+ L +S+KK+A+Y+L + + + + V +++V+F QKLGY Sbjct: 1 MKIETVIKEKYELLTKSEKKIANYVLASKERIVYGTMNDIKKAIKVGDATIVRFCQKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+ +++ SQ S + ++ ++ T + E Sbjct: 61 SGFSDLKIEVAKESYSQKSSNRTDLTLFFDENE----------NSIIEILHETKSKLDLE 110 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + ++ A I + G+G SG A++ ++IG A+ H L T Sbjct: 111 QFEKSSKLISEASAIYIFGVGLSGNTAKDLEAMFLRIGVPVKAISGSHFQLQTAALLKKT 170 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++ IS +G EL + +++ IT + L Q + L T E+ + Sbjct: 171 DLIIGISLSGKTLELFESIKIAKEQKAQIITITSSDYSPLAQLSDINLQT-VNEEFFDGG 229 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 S++ +Q + ++L + + + + V Sbjct: 230 SLTGKISQLYICEILVKNHERLYKDKSIQSREAIIRAV 267 >UniRef50_B6GAC9 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GAC9_9ACTN Length = 270 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 58/284 (20%), Positives = 117/284 (41%), Gaps = 17/284 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDT-ARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M+ + +I +++ +A ++L + L+ E GV ++++V+F +KLG Sbjct: 1 MSIIGKIESCLPSFTKTETIIARFILDHREDGVEQYLLGDLSRELGVGEATIVRFCRKLG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 GF LK LS + ++ +++ T ++ S Sbjct: 61 LGGFTELKFLLSVENEEHTAARENSG---------------EIKDILISSIKMTDSMVSS 105 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + + + V + +A + GIG SGL A +L + G A+ + HA Sbjct: 106 KDISDVVDLAGAASEVFFFGIGMSGLSASMGESRLFRFGKRTKAITEAHAQNMQASLCDE 165 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 + L++A+S +G +L A G KV+AIT + + L + A + L + + N+ Sbjct: 166 NSLIVAVSISGETIDLIEAVSLAKESGAKVVAITSYLRSTLAELADYVLLSFGKPNYINA 225 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHS-EALVKKLV 282 + S +Q + DL+ + A + +++ K+V Sbjct: 226 GAFSTVVSQLYILDLITSEYALRFSAEAARSKKRIARSIINKMV 269 >UniRef50_UPI00016A71F3 transcriptional regulator, RpiR family protein n=1 Tax=Burkholderia oklahomensis EO147 RepID=UPI00016A71F3 Length = 300 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 62/279 (22%), Positives = 115/279 (41%), Gaps = 6/279 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + I R LA + + +A L +P+ A ++A AGVS+ +VV+F + LG+ Sbjct: 11 DLFSLIHARLPDLAAAQRLVAKVFLDKPEWAMQAHVNEIAVFAGVSEPTVVRFCRALGFH 70 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G KL +++ +A SV +H + D + + K+++ + + E+ Sbjct: 71 GLRDFKLRVAQQVALG----SVALHRNVTAVDSIDEIVGKVLRSSADILLDIERQLPREQ 126 Query: 122 LHECVTMLRSARRIILTGIG-ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + ++ L SA R+ G+G SG VA + +L + G A D + + + SP Sbjct: 127 IKRAISALGSAHRVDCYGVGTTSGFVAADAQARLFRFGIQAQTYTDANMQMFSAATLSPG 186 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D ++A+S+ G L A G V+ I L L Sbjct: 187 DGVIAVSHFGRMPFLLEAVRVARERGAVVIGICE-PGTPLAGECDIPLTFALPASVNAYI 245 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 AC A + D+L + + + E++R + ++ Sbjct: 246 GSDACIAHLAIIDILIVGVAFERGAAGIEQLRRLQNVLS 284 >UniRef50_C6B6F5 Transcriptional regulator, RpiR family n=7 Tax=Alphaproteobacteria RepID=C6B6F5_RHILS Length = 287 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 55/277 (19%), Positives = 106/277 (38%), Gaps = 7/277 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ +++ L+ S+ ++A+ ++ + A + S +LA A VS +V +F ++LG Sbjct: 1 MDIFSTLQEDKGRLSPSESRIAEIIVNDFEFAVNASIIELAERAKVSPPTVTRFCRRLGC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + F K+ L+ V V + +I + A++ Sbjct: 61 ESFSDFKVQLAR-----TAHIGVRYLKPESKSTDPADVAQDIITKAQNALFLLHRSLDLA 115 Query: 121 KLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + V+ + A I G G S ++A +L ++G A D L A+ P Sbjct: 116 AIEAAVSHIAKADMIYAFGSGGNSSMIADELQNRLFRLGLRITASSDHSMQLMMAAAARP 175 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+L+ S++G EL A + + K +A+T T + + + A + E Sbjct: 176 GDVLIGSSFSGRNMELVRAFELARQTKVKTIALTQ-TDSPVAKAAEIVVPIDLPEGHNIY 234 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 S A D+L + A +R + Sbjct: 235 RPTSTRIAYIATIDILSSLVAYAVQPKATTTLRRIKQ 271 >UniRef50_C3RHA3 Transcriptional regulator n=3 Tax=Bacteria RepID=C3RHA3_9MOLU Length = 288 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 67/275 (24%), Positives = 120/275 (43%), Gaps = 2/275 (0%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 RI+ Y L S+KK+ADY+L LS LA E VSQ +V++F + +GY F Sbjct: 8 RIKTIYNILRPSEKKVADYILNYCGKLEDLSMTLLAKEVAVSQPTVMRFVKAIGYDSFKQ 67 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 KL L++ + + + I DD + + K++ T+ + L S + Sbjct: 68 FKLELAKNY-DKENNIDILYGFSINTDDKIMDLPGKIVATATSMLENALKSLSLVNYQKT 126 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 V ++ ++ I + + S VA + KL+ +G + D + + D L + Sbjct: 127 VALINQSQHISIYAVENSMGVAHDLMTKLIYLGKSVTCHSDYYLQSIDASNLTRDSLAIG 186 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 ISY+G + G + +AI F L + L T + +Q +I + Sbjct: 187 ISYSGNSKNTVEVLKIAKDAGAQTIAIVNFENTMLTRYGDIVLST-SNDQFLYGDAIFSR 245 Query: 246 HAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 AQ L D++++ +I D + +++ H L+K Sbjct: 246 TAQIALVDMIYMGVIISDYDNYTKKLDHYSRLIKH 280 >UniRef50_A3DDB2 Transcriptional regulator, RpiR family n=5 Tax=Clostridiales RepID=A3DDB2_CLOTH Length = 299 Score = 187 bits (474), Expect = 4e-46, Method: Composition-based stats. Identities = 58/281 (20%), Positives = 124/281 (44%), Gaps = 8/281 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L RI+ G ++ K +A++++ D A ++++ +L E GVS+S+VV+FA ++G+ Sbjct: 8 DLLKRIQAGMPGFSKGQKLIANFIINHYDKAAYMTAAKLGEEVGVSESTVVRFANEIGFD 67 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L+ L E S+ + R ++ + + +++ + + ATL +E Sbjct: 68 GYPKLQKVLREMNKSKLTAVQRIEVTSSRINEG--NILKSVLQSDMEKIKATLEEIDQES 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM--HALLATVQASSP 179 + V + +AR+I + G+ +S +A + I N V + + +S Sbjct: 126 FNNIVKSILNARKIYILGVRSSAPLASFLGFYFNLIFDNVRLVHTTSVSEMFEQIIHASR 185 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+++ IS+ + A G V+AIT + L + A H + ++ + Sbjct: 186 GDVVIGISFPRYSKRTINAMRFAQNQGATVVAITDSLYSPLAKNADHVITARSDMASF-- 243 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + A + + L +A+ E E + + Sbjct: 244 --VDSLVAPLSVINALIVAIGMSRKPHVQETFERLEKIWDE 282 >UniRef50_C6VMT8 Transcription regulator n=3 Tax=Lactobacillus plantarum RepID=C6VMT8_LACPJ Length = 282 Score = 187 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 67/282 (23%), Positives = 127/282 (45%), Gaps = 8/282 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L I R + +++++K+ Y+L + +S+ +LA GVS ++V +F + L Sbjct: 3 SVLFTIHNRLENFSKAEQKIGRYILDHTNAVIKMSTAELAAATGVSTATVARFGKTLIPD 62 Query: 62 G-FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G +PALKL LS + ++++I D L + KL T + T + Sbjct: 63 GGYPALKLRLSAE-----STVDQTLYDEINPKDSLDAIKSKLALRITHTIDETNRSLDDA 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L ++ + + G+GAS +VA +F K ++IG +D H L + + Sbjct: 118 ALQAASQLIADKASVYVYGLGASNVVATDFEQKFIRIGKAVIHSQDPHLLAVGMTTQRQN 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ--ATN 238 +LL IS +G + E A+ + V+ ++ + L + A L E+ Sbjct: 178 VVLLLISNSGEKSESIRLANLAHSINVPVIVLSRNATSTLGKLADIILINDDSEENQTAR 237 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +A+ ++ AQ + DLL+ I D E +++ S +K+ Sbjct: 238 AAATTSLMAQLYVVDLLYYTFITNDYERHIKQLVASREAIKE 279 >UniRef50_B7C842 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C842_9FIRM Length = 276 Score = 187 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 122/279 (43%), Gaps = 6/279 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L I Y S+KK+ADY++ P +++ +QLA SQ+SV +FA+K Sbjct: 2 ILDTIHGHYNSFFDSEKKIADYIIQHPKEVVNMTIKQLAQACNTSQASVSRFARKCQMDS 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK+ L+ ++ E S I + E ++ + + AT+ ++ Sbjct: 62 FHHLKVNLARDCVNEIEQKSNTIST-----SDISGSLETILSNKISELTATIRNIDVDQF 116 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 ++++++A+ +++ +G + VA + +K +IG ++ +D+ Sbjct: 117 SVILSLIQNAKHVLVCAVGNTVPVALDCMFKFNEIGILTFTSTIWENQVSYALGLDSNDV 176 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++AIS +G ++ EM + G + IT + + + + + T E+ + Sbjct: 177 VIAISNSGESSQVLAVCKEMKKRGVPTIGITNNEDSVVAKECVYHIQTSTREKLFLNEFC 236 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + + ++L++ L + + +RI E L L Sbjct: 237 FSRISAATIIEILYLFLTNA-SDNSYDRISQCEELYASL 274 >UniRef50_C3RHU3 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RHU3_9MOLU Length = 281 Score = 187 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 56/266 (21%), Positives = 116/266 (43%), Gaps = 2/266 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L ++R+R S+K +A+Y+L P+ LS ++L E S+++V++ +KL Sbjct: 5 ILEKLRERK-RFTNSEKLIAEYVLKHPEQLYQLSVEELGKETYTSKATVIRLCKKLEVNS 63 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + K + S+ + + + + + + ++ T + K+ Sbjct: 64 YQEFKRQVEFEYNELSRISSLLKDEPVDENSTYQDIVKVIPTIYDKSIVQTRLDLDQNKM 123 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + L A+RI + G G S +A A+K+M +G A ++ Q +S + Sbjct: 124 IQVINRLSQAKRISIYGTGISYTIASQAAFKIMTLGKECDAHSGINEHFILSQKNSRQCV 183 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + IS+TG E+ A + + G V+AI G LQ L + + + I Sbjct: 184 AILISFTGNNSEMIKIAKYLKKAGIYVIAIGGKKG-ELQNYCDIYLNVYSSQDILSLEVI 242 Query: 243 SACHAQGMLTDLLFIALIQQDLELAP 268 ++ A + D++F++L+ +D + Sbjct: 243 TSFTATMYVLDVIFVSLLVKDYQSNV 268 >UniRef50_C2KD15 RpiR family transcriptional regulator n=3 Tax=Lactobacillus crispatus RepID=C2KD15_9LACO Length = 279 Score = 186 bits (473), Expect = 6e-46, Method: Composition-based stats. Identities = 63/274 (22%), Positives = 128/274 (46%), Gaps = 9/274 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L ++ R L Q ++K+A ++L P + + QLA+ VS +++ +FA+++ Sbjct: 1 MTFLTDLQNRLPDLPQQERKIALFILQDPQFIQSANINQLASTIKVSNATITRFARRVNC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F LK+ L+ A AS N I D + ++ + T N + Sbjct: 61 SSFTDLKVKLAAAAASSQ-------VNTITNQDNSKTTAHQVYDFYNRVLSETQNKLDIK 113 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L + + +++SA+R+ GIG+SG + +L+++G +A A + + + T S D Sbjct: 114 QLKKIIQLIKSAKRVYFYGIGSSGYTSLEATQRLLRMGISAFAETESNNMFMTSSIISKD 173 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++AIS TG L A + + V+A+T + + L Q A + ++ Sbjct: 174 DLIIAISSTGSTDSLVRAIELAKKNKATVVALTSYDNSPLAQLADIVVGVQDTNYINDAR 233 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 I++ + + D++ L++ + +R+ + Sbjct: 234 FINSQFSIMYVIDVITTLLLKNN--KYHDRMTRT 265 >UniRef50_C9A459 Phosphosugar isomerase transcriptional regulator n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A459_ENTGA Length = 268 Score = 186 bits (473), Expect = 7e-46, Method: Composition-based stats. Identities = 64/267 (23%), Positives = 126/267 (47%), Gaps = 8/267 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + I L+ +D KLADY++ D ++S LA + S ++V++F++KLG+ Sbjct: 1 MSVVTTIESIKNELSTTDLKLADYIVENLDEIPTMTSNVLAVHSNTSPAAVIRFSKKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F KLAL++ + ++ ++ I+ DD + K+++ N + AT + E+ Sbjct: 61 SKFSDFKLALTKDIENR----IYNEYSDIQNDDSFQTAKNKILRNNKMIIDATDPILDEQ 116 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + V + A+RI + G+G S L A++ K +IG +D + L ++ D Sbjct: 117 TVQQVVDKMFHAKRIYVYGVGTSVLAAEDIRQKWTRIGKTVIFDKDRYLLTQQMKNDGAD 176 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ----A 236 L IS++G R++ + +G L ++ N L ++ ++T E Sbjct: 177 SLFWGISHSGKNRDVLSLVEIAKSLGMPTLGMSQLGQNQLTKKVDTPIHTARTEDIKNGH 236 Query: 237 TNSASISACHAQGMLTDLLFIALIQQD 263 S + + Q + DLLF +++ Sbjct: 237 YGSGATHSIILQIVTIDLLFYFYMRRL 263 >UniRef50_UPI00017F2FF2 transcriptional regulator n=1 Tax=Escherichia coli O157:H7 str. EC4024 RepID=UPI00017F2FF2 Length = 285 Score = 186 bits (472), Expect = 8e-46, Method: Composition-based stats. Identities = 65/276 (23%), Positives = 121/276 (43%), Gaps = 1/276 (0%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 I R L Q++ ++ ++ +S +LA+ V ++S+++F +KLGYKG Sbjct: 9 TLINTRINELTQTEIRIYQFIKNNRMRFIDMSIAKLADAMNVGEASIIRFCKKLGYKGLS 68 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 LK L ++ + + + + + ++L N A+ TL + E+ L Sbjct: 69 ELKTTLRLE-TDTDDTLLSKVTSLDEQTNSMTGIAQQLANNNYFAINETLALQEEQALVR 127 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 L +A ++ GIG S + ++ M+I N A+ D H + D+++ Sbjct: 128 AADYLSNAGQVYFYGIGMSAISVLYAKYRFMRIMANVDALIDNHTMTLNSNNVGKKDVVV 187 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 AIS++G R++ A + G + I+ ++L Q A L T S S + Sbjct: 188 AISHSGETRDVVDALKRVKEKGAVTIVISKLQHSSLSQYADVVLLTGGTSNPYQSDSSTI 247 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 AQ + D+LF AL+ + E+I S ++ K Sbjct: 248 TAAQSFMVDVLFNALLFINRGGNVEKIISSLDIINK 283 >UniRef50_A9MLD6 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- RepID=A9MLD6_SALAR Length = 293 Score = 186 bits (472), Expect = 9e-46, Method: Composition-based stats. Identities = 74/282 (26%), Positives = 129/282 (45%), Gaps = 2/282 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + + L ++D K+A Y+L QP ++LA E GVS++++V+F +K+GY Sbjct: 7 NVRVYLANILGSLGETDAKIAGYILQQPGLVVQFPVKKLAQEIGVSEATIVRFCKKVGYG 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G LK L L ++ + S+P I DD V +K+ + T+ + + Sbjct: 67 GLLNLKADLKRELLAENDL-SLPSSPDIFLDDSRNDVAQKIALTIETSARETIGLLDMKI 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V SARR++ G GASGL A K+ ++G ++ A D + + DD Sbjct: 126 VKPVVERFLSARRVMFVGFGASGLAALEARDKMNRLGIDSDAFTDRFTMTLKLANLKRDD 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++A S++G E+ A + G LAIT + L + A+ T E S Sbjct: 186 LVVAFSHSGETPEVVNAFRLAQKKGAYTLAITHSPHSPLNELANTFWLTSGEAGPMQGDS 245 Query: 242 ISACHAQGMLTDLLFIALIQQD-LELAPERIRHSEALVKKLV 282 IS +Q + + L + + + + + E L+K+ + Sbjct: 246 ISTRISQLFIIEFLCTEITRHNLRDSGMTGLSIKEILIKERI 287 >UniRef50_B7CB00 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CB00_9FIRM Length = 291 Score = 186 bits (472), Expect = 9e-46, Method: Composition-based stats. Identities = 51/281 (18%), Positives = 116/281 (41%), Gaps = 4/281 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + RI ++ + +K +ADYLL +++S LA S S++ +F KLG G Sbjct: 2 IIERIIKQ-EEFTDVEKSIADYLLKNGYEVKNMSISSLAQVTYSSTSTITRFCHKLGLDG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + ++ + + + V ++ G+D + ++L + N + T++ + +L Sbjct: 61 YKKFQILFNSEYEAYEKKGLVNVNYPFTGEDSYEQIAKQLERLNQETIAKTISCFNYNQL 120 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V + A I + +G S VA F K+++ G + L A + + + Sbjct: 121 NRIVRRMDKADMINIFSVGTSVTVAMEFQQKMLRFGKIVNLTQQACFLPGYALAGTENTV 180 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ---ATNS 239 L IS +G R++ + + + G + +T + + + + EE Sbjct: 181 NLVISLSGENRDVVESLNLLKEQGRYTVGMTSTPNSTVARECKEVILVDIEENNSYEAKI 240 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + A + D LF L + + + + + ++++ Sbjct: 241 DTFAIYSAFHFVLDCLFSFLYKYNFDSNTKITKEKAYMIER 281 >UniRef50_C5EPZ9 Transcriptional regulator n=2 Tax=Clostridiales RepID=C5EPZ9_9FIRM Length = 295 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 64/289 (22%), Positives = 123/289 (42%), Gaps = 12/289 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 I++ Y L +S++K ADY L +S +A AGVSQ +V++F + LG +G Sbjct: 5 LEYEIKRIYASLRKSEQKAADYYLGYDGPVETMSIAAMARAAGVSQPTVMRFVKALGLEG 64 Query: 63 FPALKLALSEALASQPESPSV-----------PIHNQIRGDDPLRLVGEKLIKENTAAMY 111 F K + +A S +I D V +++ ++ + + Sbjct: 65 FKEFKYQVLKASMGGNGSGMGEEEGGRSEEVLRYGYEISARDRPEEVPGRVVAQSVSYLD 124 Query: 112 ATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL 171 L S + ++ AR+I + + S VA + KLM +GFN D++ Sbjct: 125 DALKHISPSSIGRAAKLICGARQIAVYYVENSASVAGDLVTKLMYLGFNCIMYNDIYLQH 184 Query: 172 ATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI 231 + D+ + ISY+G + + G +AIT F + + A L T Sbjct: 185 ISAGNLDSRDVAIGISYSGSSKNTVDVMKLAKKKGAATIAITNFEHSLIAGHADILLCTS 244 Query: 232 AEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ Q +I + +Q + D++++ +I +D E++ S ++++ Sbjct: 245 SQ-QLLYGNAIFSRMSQTAVVDMIYMGIILRDYGHFTEKLDESSRIIRR 292 >UniRef50_D0R5V5 Transcriptional regulator n=10 Tax=Lactobacillus RepID=D0R5V5_LACJF Length = 272 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 64/280 (22%), Positives = 120/280 (42%), Gaps = 11/280 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + R Q L +S+ KLA+Y+ + + + + L +++V+ +KLGY Sbjct: 1 MEFIQRYNQNKDKLTKSENKLANYIATHTEHVIYDTIKSLGTANNTGDATIVRLCKKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+AL++ + K++ +++ T + + Sbjct: 61 SGFSDLKIALAQDSMMTTSKSHEEAQ-------TSSELSSKVL---ISSIEKTEELINPS 110 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V++L ARRI + G+G SG A+++ ++IG A A D H + S D Sbjct: 111 VLKQAVSLLAKARRIHIFGLGHSGESARDYERTWLRIGLIANAESDPHIQVQVATLLSKD 170 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++ +S +G ++ + G K++AIT + + Q L T E N Sbjct: 171 DLVVGLSLSGHTKDTYDSLKVAKEYGAKIIAITNDLTSPIAQLGDVSLQTSVSE-FMNIG 229 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +++ +Q L D+L + + + + A V K Sbjct: 230 TVAGQVSQLYLCDVLAREYEKLNKVDVDKIKEQALAAVMK 269 >UniRef50_Q03FC5 Transcriptional regulator n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03FC5_PEDPA Length = 280 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 60/281 (21%), Positives = 136/281 (48%), Gaps = 9/281 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L + ++ ++S++K+A +++ P ++++++++ VS ++VV+ A+K+ Sbjct: 3 NILFTLSNDFEKFSRSEQKVARFMIDYPREVIQMNAEEISDRTQVSPATVVRLAKKICKS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G P LK+ ++ + ++ ++ D L ++ KL + A+ T + + Sbjct: 63 GLPGLKIQVASEIK-----VDDSLYTEVNPSDDLDVMKHKLEFRISHAIGQTNQILLKND 117 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + ++ A I + G+GAS LVA++F K ++IG + D H L V + P+ Sbjct: 118 VKKATDIVEQADDIYVFGMGASNLVAEDFQQKFIRIGKSVIQTLDTH--LMAVGLAKPNS 175 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT--IAEEQATNS 239 +L+ +S +G +E + ++AIT + + + ++ L E + Sbjct: 176 VLIVVSDSGETKESCHITRVASSLNIPIIAITHERNSTIAKNSTVTLTHDDGGESGVLRT 235 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A+ ++ AQ + DLL+ A + QD R+ S+ ++ + Sbjct: 236 AATTSLLAQLYVVDLLYYAYLTQDFSNNKARLVKSKTIIAE 276 >UniRef50_A6D304 DNA-binding transcriptional repressor RpiR n=1 Tax=Vibrio shilonii AK1 RepID=A6D304_9VIBR Length = 289 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 66/279 (23%), Positives = 129/279 (46%), Gaps = 4/279 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + IR L ++++ +A+ L + S ++A VS + +VK ++KLG+ G Sbjct: 13 VIPNIRMMMPSLTKTEQSIAENFLQPHFLQKSTSINEVAERLSVSPALIVKVSKKLGFSG 72 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK E+L +Q E+ S ++ DD + K+++ + A+ LN + Sbjct: 73 FKQLK----ESLYAQSETQSYAPSERLLPDDSAEKIVSKVLQNSINALTEILNFVDVSMV 128 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 L AR I L +G S ++ ++F KL++IG ++ +D H +L + + D+ Sbjct: 129 DAAAEALLKARNIELFAVGGSSIICEDFQHKLLRIGIKSSVPKDRHLMLMSASIMTDQDV 188 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 +L +S++G +L A + + G V++IT L + LY A + + Sbjct: 189 VLVVSHSGQTVDLMDAVRQAKQSGATVISITNNYHAELSSLSDIPLYAPASPEPVLGKNG 248 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +A + + D L+ + + LA E + + V++L Sbjct: 249 TARLVKLAMIDSLYATMASKMPSLAEESLSKTIRAVERL 287 >UniRef50_D2BPE4 Transcriptional regulator, RpiR family n=1 Tax=Lactococcus lactis subsp. lactis KF147 RepID=D2BPE4_LACLK Length = 273 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 53/280 (18%), Positives = 123/280 (43%), Gaps = 10/280 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L +I+ +Q +S+KK+A+++L P + LA + VS++S+ +F +KL Sbjct: 1 MNILDQIQVNFQNFFESEKKIAEFILKNPKKVIDMPIALLARNSNVSEASISRFCKKLNL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+ L+ + ++ + L + + + K T + A + + Sbjct: 61 TGFHQLKIELAR--------IQDNENIKVNKNTSLNELIKNISKIKTTELIAATDNLDID 112 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + ++ + + G + VA++ +++ ++G + D A + Sbjct: 113 NLQSIIKIITNVKLTHFVASGNTIPVAEDASYRFNQLGITSVVFDDWQVQTAFTLNMRKE 172 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DLL+ IS +G + L + +++IT + + + ++ L + + + ++ Sbjct: 173 DLLIVISNSGESKSLIKLINIAKEKKIPIISITNHPDSPIARLSNFHLTSFSRDYFFHND 232 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + L +L+F+ L Q + E I+ E ++ + Sbjct: 233 YYFSRLSAMYLIELIFLILSQD--KSRLENIKLHEQIISE 270 >UniRef50_D1AK74 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AK74_SEBTE Length = 284 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 68/274 (24%), Positives = 136/274 (49%), Gaps = 6/274 (2%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 +++ Y L +S+KK+A++++ + + ++S ++ + V Q++V++F++KLGY F Sbjct: 13 KLKSVYNDLTKSEKKIANFIMKNFEKTKTMTSYDISKKVNVGQATVIRFSKKLGYSSFNE 72 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 L ++++ + I D + K+ + + TL +N E Sbjct: 73 LINSINKLDQE------DILEKNISLGDDIATTNTKIANQYIDVIKLTLELNPVYVFEEV 126 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 + + +A RI++ GIG S +V+ +F KL ++G NA D H + + +DLL+ Sbjct: 127 IEAIIAAERIVVLGIGNSAIVSTDFVNKLARVGMNAFTNLDTHLQFSMISNLGKNDLLIL 186 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 IS +G RE+ AA + ++++IT FT N L + L T + + + ++ Sbjct: 187 ISDSGETREIIEAAKLAKQNKTRIISITKFTKNKLHAYSDFILKTASFDINLRLDATTSR 246 Query: 246 HAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 Q + D++FI +++ D E I +S+ VK Sbjct: 247 ITQFTIIDMIFINILKTDFSKYKEIITNSDNAVK 280 >UniRef50_C0C246 Putative uncharacterized protein n=2 Tax=Clostridium hylemonae DSM 15053 RepID=C0C246_9CLOT Length = 292 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 115/278 (41%), Gaps = 3/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L R L ++K++A+++L P +S ++LA ++++V+ + +G Sbjct: 9 NILATTRFLLPSLTAAEKRVAEFVLASPKEVTRMSLKKLAVRCECGEATIVRLCKTIGVS 68 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ LK L L ++ + + ++ + N + TL V + E+ Sbjct: 69 GYAELKSLLETQLQLPAVKEESV---RLSTGQGMGEIVARVFELNILNLRRTLEVAAVEE 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 +L +A +I IG + + + +IG++ A D + D Sbjct: 126 YENACEVLSTANKICFFAIGDAMFPCSYASLRFRRIGYDCYADSDADVQIVNACNMKEGD 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + +AIS++G +++ A G + IT + L + + LY + + + Sbjct: 186 VAIAISHSGRTKQVVEAMRIAKSRGAVTICITKAGKSELTKYSDIVLYNVTTDTTVDKEI 245 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 I+ A+ + D +++ ++Q+ + R++ +K Sbjct: 246 IARRVAEQAMLDAVYMGVLQKMEANSFARLQEVSENLK 283 >UniRef50_Q15N75 Transcriptional regulator, RpiR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15N75_PSEA6 Length = 282 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 107/281 (38%), Positives = 161/281 (57%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ +I+ L+ S+ KLA ++L + R LSSQ+LAN GVSQSSVVKFAQKLGY Sbjct: 1 MSTFTKIKAIKDTLSNSELKLAKFVLSSSNAVRDLSSQELANVVGVSQSSVVKFAQKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG+PA KL + +AL S +H +I +D + V EKL+ A + T N+N E Sbjct: 61 KGYPAFKLGVIDALNSTAS--EGNLHGKITLNDSFKQVSEKLLSSKVAVLTETKNLNEEA 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 H+ V +L+SA+RI++ G+G S LV ++F++KL K+G A DMHA LA S + Sbjct: 119 AFHQAVELLKSAKRILICGLGGSALVGKDFSYKLQKLGMLAIEEPDMHAQLAFAATLSEN 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL+ AIS +G RE+ + + KV+ +T + + A LY++AEE++ + Sbjct: 179 DLVFAISESGSTREIVNVVKQAKQNSCKVITVTRYGATPVSDLADIKLYSVAEEESARLS 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 SI A AQ + D+LFIA+ Q + + + ++V Sbjct: 239 SIMARTAQEFIIDILFIAITQS-SRQGRQLLEKTNSVVSDF 278 >UniRef50_D2ELR8 Transcription regulator n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2ELR8_PEDAC Length = 280 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 56/280 (20%), Positives = 123/280 (43%), Gaps = 9/280 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + ++ + + +K++A +++ P +++Q+A++ G S ++V++ A+++ Sbjct: 5 SVVFTLKNQLGDFTKKEKQVARFIIKYPQAVIDSNAKQVADQVGTSAATVIRLAKRVCKN 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G P LK L + +I D L ++ +K+ + T Sbjct: 65 GLPELKERLKNE-----TMVNDKFFEEIDPADTLEVMKQKMEYRINHTIEQTNRTVKGGA 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + ++ A + GIGAS LVA + K ++G A +D+H L A + Sbjct: 120 VRNAAKLVDQADVVYTYGIGASHLVADDLQQKFGRLGKPVAQTQDVHLLAAEMSKGR--G 177 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT--IAEEQATNS 239 +++ IS +G +E + V+AIT + L ++++ L E S Sbjct: 178 VVVLISNSGETKETLQLLGAARALDLPVVAITRVLSSPLARQSTVVLAHSDSGEGNQLRS 237 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 A+ ++ AQ + DLL+ + ++ E +++ S ++K Sbjct: 238 AATTSLMAQLYVVDLLYYSFLKLHFEDNVDQLTKSRKIIK 277 >UniRef50_C4FU45 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FU45_9FIRM Length = 277 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 58/283 (20%), Positives = 130/283 (45%), Gaps = 14/283 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L RI + L+ ++ LA Y++ + +++ ++A E GVS +++ +F +K+G Sbjct: 1 MGVLERIEANFVHLSPKEQLLATYIMQESPYFTNITISEMAKETGVSAATITRFCRKVGC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + F LK+ L + + + + + + + T + SE Sbjct: 61 ESFVDLKIQLQASEGESASNHQN------------HDMFDTVSEFYNRIIQRTSELQSEY 108 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L + + +L A RI++ G+G+SGL A+ A +L ++G A + D H ++ + + Sbjct: 109 QLRQLIQVLSQANRIMVYGMGSSGLTARELAIRLSRMGLPATSETDSHMMIISSTVTRSS 168 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++AIS +G +++ A + G ++AIT ++L + A L + Sbjct: 169 DVVIAISNSGETKDVIDALGNAKQNGAILVAITSMKGSSLAKLADETLLVHNSRFVNSEF 228 Query: 241 SISACHAQGMLTDLLFIALIQQ--DLELAPERIRHSEALVKKL 281 ++ L D + + +++ + + I+ ++ +KL Sbjct: 229 FVNTQLPIFFLIDAITLMMLENPVFSQNMQKTIQEITSINQKL 271 >UniRef50_B7X566 Transcriptional regulator, RpiR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X566_COMTE Length = 282 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 61/283 (21%), Positives = 124/283 (43%), Gaps = 10/283 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L ++ + L ++K++ ++ P +S+ ++A+E VSQ +VV+F + LGY G Sbjct: 1 MLDQVMATLETLTPAEKRVGKLVIENPRRFASMSTSEIASECFVSQPTVVRFCKGLGYGG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 K L + +H+ + D V K++ + A + + + Sbjct: 61 LTQFKQKLRGDRSDG----VPYVHSSVDAGDTSFNVALKVVDSSIATLALFRTYVPKISI 116 Query: 123 HECVTMLRSA----RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 L +A R + G G SG+VAQ+ + ++GFN+ A+ D ++ + + Sbjct: 117 ERASNTLAAAYSEQRSLSFYGSGHSGVVAQDAQLRFSRLGFNSTALNDGYSQVLNAASRK 176 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D+++A+S +G +EL + D R G V+A+TG L S L T E Sbjct: 177 EGDVVVALSCSGRTKELLESVDVAKRQGATVIAVTGS-GTPLATMGSIHLATDHLEDIDR 235 Query: 239 SASISACHAQGMLTDLLFIALIQQDL-ELAPERIRHSEALVKK 280 +S+ ++ D++ A+ Q +++ ++ ++ Sbjct: 236 YLPMSSRLLHLVVIDIVATAVALQIGCGRLQDQLERTQNHLRH 278 >UniRef50_B5GNW3 RpiR-family transcriptional regulator n=14 Tax=Streptomyces RepID=B5GNW3_STRCL Length = 354 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 78/277 (28%), Positives = 126/277 (45%), Gaps = 1/277 (0%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 ++R + +S +++A+ + P L+ LA G S+++VV+ A+ LGY G+ Sbjct: 70 SKVRTLVPSMTRSMQRVAEAVADDPAGCAALTVTGLAERTGTSEATVVRTARLLGYPGYR 129 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 L+LAL+ A Q S + I DDPL V KL ++ + T L Sbjct: 130 DLRLALAGLAAHQQSGRSPSVTADISVDDPLPDVVAKLARDEQQTLADTAATLDTAALAA 189 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 V+ +ARRI + G+GAS LV + A KL++IG A A D H + D+ + Sbjct: 190 AVSAAATARRIDIYGVGASSLVGLDLAQKLLRIGLIAHAHTDPHLAVTNAVQLRTGDVAV 249 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA-EEQATNSASIS 243 AI+++G ++ G +AITG + Q A H L T E A++S Sbjct: 250 AITHSGSTGDVIEPLRAAFERGATTIAITGRADGPVTQYADHVLTTSTSRESELRPAAMS 309 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + Q ++ D LFI + Q+ A + S + Sbjct: 310 SRTGQLLVVDCLFIGVAQRTYASAAPALAASYEALAH 346 >UniRef50_C6J2D0 Transcription regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J2D0_9BACL Length = 284 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 72/277 (25%), Positives = 132/277 (47%), Gaps = 5/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L ++ + L +S++K A Y+L LS +A++AG S +++ + + LG Sbjct: 5 SVLTQMEAMLEQLPESERKAAQYILTASAEVSGLSIHAVADKAGTSAAAITRLCRSLGLS 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GFP LK+ LS P P + I + ++ V +K + + A+ + E Sbjct: 65 GFPDLKMRLSVD----NAKPQRPGYYDIERGETIQNVIQKTVSNSLQAIQDMMLHLQPEL 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V R A I + G+GAS +VA + A K +++G A A++D H + A + ++ P Sbjct: 121 IEQVVDSFREASVIHMYGVGASAIVAADAAQKWLRLGKQAFALQDEHLIAAALASAPPGA 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSA 240 L + ISY+G +E+ + G + + ++ F + + + A LYT A E S Sbjct: 181 LFMGISYSGNTKEVLQLFRVAQKYGVRTIGLSRFGNHKVAELADLMLYTPQAPEATLRSG 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + S+ AQ ++ D+LF A E R+ + Sbjct: 241 ASSSRLAQLVMIDILFFAYASTQYEETILRLSQTHEA 277 >UniRef50_C0C5Q9 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C5Q9_9CLOT Length = 287 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 69/278 (24%), Positives = 135/278 (48%), Gaps = 5/278 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGV-SQSSVVKFAQKLGYKG 62 L +I + Y L + K+LADY+L P + S L + + S++SVVKF + LG+ G Sbjct: 11 LAKISELYPQLTKGQKQLADYILKNPSEVVNKSITDLISHTSLKSEASVVKFYRLLGFDG 70 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F + K+ L++ L ++ S + I DD + +K+ +++ + + + Sbjct: 71 FKSFKIKLAQELVNRTFYHS---ESDITIDDEPTEIKKKVFLGAMSSLSKNAD-IAAGEC 126 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + +L SA+RII+ G GAS + Q ++L ++G N +D H A + P D+ Sbjct: 127 MDAQKLLSSAKRIIILGHGASASICQYAFFRLTELGLNCVCNQDAHMNAAILTHPRPGDV 186 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 +L +S +G +L + + + ITG +++ + + L T++EE+ + ++ Sbjct: 187 ILCVSQSGETADLYKQIEMAYQRRIPAILITGAPGSSIARLSQVILSTVSEERNILTDAL 246 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ +Q L D LF + + R++ + KK Sbjct: 247 NSRVSQFCLIDALFSMISIANANEMLPRLQDTRNTFKK 284 >UniRef50_A6UIG8 Transcriptional regulator, RpiR family n=8 Tax=Rhizobiaceae RepID=A6UIG8_SINMW Length = 287 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 105/277 (37%), Gaps = 7/277 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ +++ L+QS+ ++AD LL + A + S +LA +A VS +V +F ++LG Sbjct: 1 MDIFATLQEEKGRLSQSENRIADILLNDFEFAVNASIIELAGKADVSPPTVTRFCRRLGC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + F K+ L+ +Q V + +I + A+ Sbjct: 61 ESFSDFKVQLARTPYVGMRYLKPEPKSQ-----EPGDVAQDIITKAQNALLLLHRSLDLA 115 Query: 121 KLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L A I G G S ++A F +L ++G + D + A+ P Sbjct: 116 AIERAADQLAQAEMIYAFGSGGNSSMIAGEFQNRLFRLGMRITSSSDHSMQMMMAAAARP 175 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+++ S++G EL A +A+T + + Q A + E Sbjct: 176 ADVIVGSSFSGRNAELVRAFILAREAKVPTIALTQS-GSPVAQAADITVPVDLPEGNNIY 234 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 S A L D++ + + A +R + Sbjct: 235 RPTSTRIAYLALLDIVASLVAYRVQPQATVTLRRIKQ 271 >UniRef50_C8P0W4 RpiR family phosphosugar-binding transcriptional regulator n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P0W4_ERYRH Length = 285 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 65/282 (23%), Positives = 118/282 (41%), Gaps = 3/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + RI+ L+ ++ K+A Y+L P L+ +L+ S S++ +F +K+ Sbjct: 1 MLLINRIK-NSTQLSDTESKIAQYILENPQLVTQLTIHELSEITYASASTITRFCRKMKT 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHN-QIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 +GF K+ L+ L+S + + + + + + + ++ N +M T N Sbjct: 60 EGFSDFKVKLAGELSSFSITENRIRDDVPFQSNHTSTEIVQSILSLNYQSMSDTYNNIDL 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E+L + A I L G G S ++AQ+F +KL +I + + Sbjct: 120 EQLERIAHKIYYAPHIYLYGSGQSLILAQDFQYKLFRIELDCNLETSLGFQSLKANTQPL 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT-IAEEQATN 238 D + L ISY G D ++ + ITG N L AS ++ EE T Sbjct: 180 DSIALIISYYGQNEHNKTIVDSLVERNIPYILITGPLNNPLCTHASEVVHVSPQEELVTK 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 AS S+ + ++ D ++ + D E + I +KK Sbjct: 240 MASFSSRTSMQLVLDFIYALIFAIDYEKNQKIIEKHPWYIKK 281 >UniRef50_P0ACS8 HTH-type transcriptional regulator rpiR n=34 Tax=Gammaproteobacteria RepID=RPIR_ECOL6 Length = 296 Score = 184 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 54/273 (19%), Positives = 125/273 (45%), Gaps = 4/273 (1%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 +R + +G+ +++ ++ ++LL + + + + +A VS++ +VK ++ LG+ GF L Sbjct: 20 LRMKQEGMTENESRIVEWLLKPGNLSCAPAIKDVAEALAVSEAMIVKVSKLLGFSGFRNL 79 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 + AL + + + + D V K+ + ++ + +++H Sbjct: 80 RSALEDYFSQSEQVLPSELAFDEAPQD----VVNKVFNITLRTIMEGQSIVNVDEIHRAA 135 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 AR+ L G G S + + K ++IG A D H ++ + D++L + Sbjct: 136 RFFYQARQRDLYGAGGSNAICADVQHKFLRIGVRCQAYPDAHIMMMSASLLQEGDVVLVV 195 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 +++G ++ A + + G K++ IT + + + A + + + A E + SA Sbjct: 196 THSGRTSDVKAAVELAKKNGAKIICITHSYHSPIAKLADYIICSPAPETPLLGRNASARI 255 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 Q L D F+++ Q ++E A ++ + A+V Sbjct: 256 LQLTLLDAFFVSVAQLNIEQANINMQKTGAIVD 288 >UniRef50_C7XVK6 6-phospho 3-hexuloisomerase n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XVK6_9LACO Length = 280 Score = 184 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 62/274 (22%), Positives = 132/274 (48%), Gaps = 14/274 (5%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 +++ + L + +KK+A L +P+ R ++ +LAN+AGV ++V +F +++G K F Sbjct: 2 EQVQNLFINLPRQEKKVARVTLQKPELVRRMNITELANQAGVGVATVSRFTKRVGCKNFA 61 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 KLAL P++ + + + +K++ E T+ + S ++L + Sbjct: 62 DFKLALV-----TPDTMQRESEQNVSTPNDIHNYYQKILAE-------TMAMVSTKQLRQ 109 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 ++ A+R+ + GIG+SG AQ FA +LM++G A A+ + + + +D+++ Sbjct: 110 AANLIHGAKRVYVFGIGSSGYNAQEFAQRLMRMGKPAFAMTESNMMTIASATMQDNDIVI 169 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 A+S +G E+ A + + G ++A+T F + L + + + E + I++ Sbjct: 170 ALSVSGSTPEVCSAVRDSRKNGATIIAVTAFKNSLLGKMSDLLFQIKSTELVGDYDFINS 229 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 A + D+L L+Q + + + Sbjct: 230 QFAVTYVIDMLTQMLLQ--FTDFRATMNKTVEAI 261 >UniRef50_C5D4L1 Transcriptional regulator, RpiR family n=1 Tax=Geobacillus sp. WCH70 RepID=C5D4L1_GEOSW Length = 282 Score = 183 bits (465), Expect = 5e-45, Method: Composition-based stats. Identities = 52/282 (18%), Positives = 117/282 (41%), Gaps = 6/282 (2%) Query: 1 MN-GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 MN I ++ ++++ +K+A Y+L P+ + +LA AGVS+++VV+FA LG Sbjct: 1 MNEVYRLIAEKLPEMSRAQRKIAKYVLNNPEAVPFFTVGKLAKMAGVSEATVVRFATFLG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 + G+P + A+ E++ Q + + D ++ +E+ + A Sbjct: 61 FSGYPEWQQAMQESMKRQLTTVER-LKISEEVYDSEDKSIFEMFQEDIERIKAMSVQIDM 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + ++ V + A+RI + ++ + + + NA +R+ H + + + Sbjct: 120 DLFYQAVQYITDAKRIFIIANRSAVSLGLFLEFYFDILFENAELIRNPHGISEKLFRLNK 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD+++ +S+ + A G K++ IT + L L E + Sbjct: 180 DDVVIGLSFARYTKSTIEAVAFAKDRGAKIIVITDHLLSPLVSYGDVTLCAPTEMPSF-- 237 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 I + A L + L + ++ + + E + ++ Sbjct: 238 --IDSFVAPLSLVNALITEVGRRKRSEVEKHLSDLEEIWERF 277 >UniRef50_Q5WK55 RpiR family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WK55_BACSK Length = 268 Score = 183 bits (465), Expect = 6e-45, Method: Composition-based stats. Identities = 59/279 (21%), Positives = 130/279 (46%), Gaps = 17/279 (6%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +I+ Y L+ ++K++ADY++ P+ ++ + LA + VS +++ +F +K+G Sbjct: 4 MLQQIQVNYHALSAAEKRIADYVMSAPEELANIHIKDLAAKCSVSVATITRFCRKVGAAN 63 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F K+++ +++ ++ E + ++ A + + + +++ + Sbjct: 64 FVEFKMSVRDSIRTEEEG---------------GELIAEMESIYKAIIGGSRELINQDDI 108 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + T+L +A RI + GIG+SGL Q ++LM++G D H ++ + D+ Sbjct: 109 VQAATLLENANRIEIYGIGSSGLSGQEMKFRLMRMGMRVDCHIDSHTMVMNASLLTAADV 168 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 +LAIS +G ++ A G V+ +T L + A L + + + + Sbjct: 169 VLAISNSGHTVDIQEAVALAKENGATVILLTNHEHTPLSEMADLLLLSFSPKPFYARGFL 228 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +A + + D L ++ Q+ E A R R + + +L Sbjct: 229 NAQLSIVHVLD-LISLVLAQNEERAKAR-RKTLHALSQL 265 >UniRef50_B7UNF1 Predicted transcriptional regulator, RpiR family n=11 Tax=Escherichia RepID=B7UNF1_ECO27 Length = 281 Score = 183 bits (465), Expect = 6e-45, Method: Composition-based stats. Identities = 57/284 (20%), Positives = 116/284 (40%), Gaps = 8/284 (2%) Query: 1 MN---GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQK 57 MN I+ Y L Q++KK+ADY+L + S +L+ ++ S++++V+ +K Sbjct: 1 MNNITVKSLIQSNYPTLHQAEKKVADYILSHAHEVVNYSVTELSEKSHASEATIVRTCKK 60 Query: 58 LGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 LGY+G+ LK+AL++ + + S + + L+K+ + + Sbjct: 61 LGYQGYYHLKIALAKEVINPDNSYPDNTDFT-----DITSLATFLLKKQAEDLIQSTQFF 115 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 + E L + +L + I G S +A A+K ++G + + Sbjct: 116 NAEVLESILKLLANCDTIFFFAAGNSNPLAVYGAYKFSQLGLKTVVHVSPEMQINAAYSM 175 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 DL + IS +G + + G K + IT + + L + ++H L T ++ Sbjct: 176 GKRDLAIGISNSGSTNLMVDIFKVVKERGAKSVCITNYIKSPLSKLSTHQLNTAVSDKIF 235 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 A S + D+L + + ++ + E L + Sbjct: 236 FEAFDSTRVPAMGVIDMLVLLFMYKNKAHYEKYRTREEFLGSRF 279 >UniRef50_B7LQI9 Transcriptional regulator n=32 Tax=Gammaproteobacteria RepID=B7LQI9_ESCF3 Length = 301 Score = 183 bits (464), Expect = 7e-45, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 117/279 (41%), Gaps = 11/279 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I +R+ L ++K++A ++L A L +LA SQ+SV +FA+ LG K Sbjct: 20 DIISCITERFMALTATEKRIAQFILDDVPAAVELPIAELARLTQTSQASVTRFARALGCK 79 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 LK+ L+++LA + + + + + Sbjct: 80 DVRELKVKLAQSLAIGQRFILDVPDLDG---------VQGIYESIISVLETHRRSLDMNA 130 Query: 122 LHECVTMLRSARRIILTGI-GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + V+ L AR+I+ G G S + +Q ++L ++G + D + A P Sbjct: 131 ISQAVSWLSQARQILALGTGGGSTICSQEIQYRLFRLGLPVVSQNDALMMRMMCSAVMPQ 190 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ +S G E+ +A + G +V+AIT L ++ L + +E Sbjct: 191 DVVIVLSLGGYTPEIIESAAIARQYGARVIAIT-PAQTPLAEQVDLVLPLLVQESDYIFK 249 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + +A + D+L L + A +R+R + ++ Sbjct: 250 PTPSRYAMLAMVDVLATELAMANKAQAKDRLRRIKLVLD 288 >UniRef50_D1TJG3 Putative transcriptional regulator, RpiR family n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TJG3_9BURK Length = 325 Score = 182 bits (463), Expect = 9e-45, Method: Composition-based stats. Identities = 64/279 (22%), Positives = 116/279 (41%), Gaps = 7/279 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + RI + L +++K+A +L A S LA +A VS ++V +FA+ +G + Sbjct: 40 DIVARIAECAPELRSAERKVAALILDDLTGASRASIGALAQQAEVSIATVTRFAKAVGCR 99 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 LKL L++A A D + ++ E A+ + + Sbjct: 100 DVRELKLRLAQAAAVGQRFLERDA-----ASDAPEPIATRVFDELQTALAHNHQLLRQAP 154 Query: 122 LHECVTMLRSARRIILTGI-GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L E LR+AR I + G+ G S +A ++L+++G A +D S D Sbjct: 155 LAEAAAALRNARMIYVFGMGGGSTALADEMRFRLVRLGRPVATYQDGLLQRMVASTVSRD 214 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +++A+S TG E+ G V+A+T + L + A + +A E Sbjct: 215 CVVVALSTTGRVPEMVENCKIARSYGATVVAVTA-PASPLARLADWLIPIVAFETDFIYK 273 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S+ +A M D+L L + + E +R + + Sbjct: 274 PSSSRYAMMMALDVLVTELAVSQGDESRELLRRMKHALD 312 >UniRef50_A6UGP6 Transcriptional regulator, RpiR family n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6UGP6_SINMW Length = 284 Score = 182 bits (461), Expect = 1e-44, Method: Composition-based stats. Identities = 72/274 (26%), Positives = 130/274 (47%), Gaps = 8/274 (2%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 R+R L+ +++++A ++L D + S +A VS ++V++ + G++GF Sbjct: 14 SRLRSVLPKLSDAERRVALWMLKNVDLSIRQSMSAIAQATDVSDTTVLRMCRTAGFEGFT 73 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 LKLAL++ E S + +L + T A+ T V E + Sbjct: 74 DLKLALAQEPREAIEHSSG------EPEASALQAAGRLFRAITQALNDTFGVLDEATFAK 127 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 + ++ +A+ I++ G+G SG+VAQ F + +++G A D + + P DL++ Sbjct: 128 ALDLVANAKHIMVGGVGGSGIVAQAFYQRCIRLGLRCDAPIDSQLQIMHAALTGPGDLVV 187 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 AISY+G+ + L E G L ITG + +AL + A L +++ EQ S ++A Sbjct: 188 AISYSGITSDPVLVLQEAKARGASTLCITGNSSSALARLADVVLVSVSHEQ--GSEPMAA 245 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 AQ L D L+ AL+ ++ E A + Sbjct: 246 QIAQMTLVDALYAALVARNPEPAQLTEERMVNAI 279 >UniRef50_A8UCF8 Phosphosugar-binding transcriptional regulator, RpiR family protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8UCF8_9LACT Length = 283 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 65/279 (23%), Positives = 136/279 (48%), Gaps = 4/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L RI+ L S++K+ +Y+L P+ +++ QL A + ++V++ ++G Sbjct: 5 NILGRIKSVLDDLPNSERKIGEYILTYPEETIKMTTSQLGIAAESNSTAVIRLCNRIGVN 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ LS + S + +I ++ + + KL+ +M T+++ +E Sbjct: 65 GFTKLKVNLSAEIVS----VDESGYAEIEAEETIGTIKNKLLTNAFKSMEETISLMNEFD 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + ++ SA + + G+G S ++A+N K ++G D H L++ + A+ + Sbjct: 121 IERVIELIESASMVYVYGVGNSRIIAENMVQKWSRVGKIVICPTDNHQLVSMLGAAPKNA 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L IS +G RE+ + K + +T F N+L +A + + T+ ++ + Sbjct: 181 LFFGISNSGETREIIELIKLAKKCSLKTVGLTQFGQNSLTNKADYTIQTVKTIESDSQFI 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 S+ HAQ + D+LF + + ++ ERI+ S + + Sbjct: 241 SSSLHAQLIAIDVLFYSFLSKNYVAGTERIKQSREEMNQ 279 >UniRef50_C0X6G8 RpiR family transcriptional regulator n=23 Tax=Enterococcus RepID=C0X6G8_ENTFA Length = 283 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 70/282 (24%), Positives = 135/282 (47%), Gaps = 3/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + IRQ+Y+ ++ +K++ADY+L P L++ ++A+ + S +SV +F+++LG+ Sbjct: 1 MEPIRSIRQKYKDFSKVNKRIADYILKDPTRLLSLTANEIASNSETSPASVTRFSKQLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + LKL+++ + I + DD + + K+ A + ++ Sbjct: 61 DSWEELKLSIAA--VQAASNGKKDIDPIVAADDSVDTICMKVESLLNATIEDLFYTVDKQ 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + ++ A +I L GIGAS L N K + G A D H +L + ++ Sbjct: 119 ALERAIAHVKKAEKIHLVGIGASSLTTYNLYHKFNRAGRQAIFNYDSHMMLEFLNYATAQ 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L+ +SY+G+ +E +A + G V+ IT ++ + L E Sbjct: 179 DILITVSYSGLTKEALIACEIAKNRGATVIFITSNDGENVRSLSDEVLLVPNNEHLIRVG 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPER-IRHSEALVKKL 281 +IS+ + + D+L++ IQ DL+ ER + + LV +L Sbjct: 239 AISSIASSMAIGDVLYLGSIQDDLDTEIERNMIETSQLVSRL 280 >UniRef50_UPI00016945F6 hypothetical protein Plarl_13824 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI00016945F6 Length = 248 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 66/244 (27%), Positives = 128/244 (52%) Query: 38 QQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRL 97 Q+LA A VS++++V+ ++ L KG+ LKL ++ LA S + +I D + Sbjct: 1 QRLAELAEVSEATIVRLSRSLNLKGYQELKLRIAADLAQSLNSNLAESYQEIHMDASSQS 60 Query: 98 VGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKI 157 + E + N ++ T++V + ++L + +L AR+I L GIGAS ++AQ+F KL +I Sbjct: 61 LVESISHNNMRSIQDTMSVLNIKELDRAIEVLGGARKITLFGIGASAVIAQDFKQKLTRI 120 Query: 158 GFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTP 217 A D + D +L ISY+G +++ LA G ++++T F Sbjct: 121 NRWCEAAYDFDSQATLAANLQEKDAVLGISYSGNTQDILLAMQAAKERGATLISLTKFGH 180 Query: 218 NALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 N + ++A L+T + E++ S ++++ AQ + D+L++ + +Q+ E + ++ Sbjct: 181 NPVAEQAHIRLFTSSLEKSIRSGAMASRIAQLNVIDILYVGIARQNYEENILALENTRKA 240 Query: 278 VKKL 281 VK + Sbjct: 241 VKMM 244 >UniRef50_Q38V38 Putative transcriptional regulator with a sugarisomerase domain, RpiR family n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Q38V38_LACSS Length = 276 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 126/278 (45%), Gaps = 9/278 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + I+Q+Y L+ ++K+A ++ + + + + +LA E VS S++ +F +K+G Sbjct: 1 MAIIEHIKQQYSFLSPQEQKVALAVIQKGASIQRIGIDELAAELQVSNSTISRFVRKIGC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + F KL SE P + D ++ + + T + Sbjct: 61 QNFVDFKLQFSE-------GPQPTMTGVQGQVDHESQTSVEIYQFYQDVITKTQARIKQA 113 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V+ +++++++ + G+G+SG F +L ++G A V + H +L T + + Sbjct: 114 DLDQLVSWIKTSQQLFIYGLGSSGYTGAEFGQRLTRMGIQATVVTESHMMLMTSRIINKT 173 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++ +S +G E+N A G K AIT T + L + L+ ++ Sbjct: 174 DLVIGLSNSGNTEEVNQAVQNARENGAKTAAITSGTDSPLAAASDLTLFVEDSIGFASAR 233 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +++ A + D+L + L++ E R++ + + Sbjct: 234 FVNSQFALTYVIDILAMLLLED--EQYNWRMKQTVDTI 269 >UniRef50_B9E8A7 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E8A7_MACCJ Length = 285 Score = 180 bits (457), Expect = 4e-44, Method: Composition-based stats. Identities = 58/275 (21%), Positives = 125/275 (45%), Gaps = 3/275 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +I + Y +K++AD ++ P+ +L +++A+ + S++++V+F+++LG Sbjct: 3 SVLGQITKMYDSFTPVEKRIADVVIEYPEKVVNLPIKEIAHLSNTSEAAIVRFSKRLGLS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G +K+ L+ L + + +I D ++ EK+ A+Y T V S + Sbjct: 63 GIKVVKVELARELHT---IADKKVPTKIELTDDEEVMKEKVFNNTIQALYNTEKVISAKV 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + E + SA+R+++ G+G S +VA + KLM I +A D+ + + + D Sbjct: 120 IDEAAQAITSAKRVMIFGVGNSRVVATDLHVKLMNIDQSAILATDLLSAITLLGHYEAGD 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L S T + + G K++ +T + + A L EE N Sbjct: 180 VLFVTSETSKNKVITDICKYAKEKGIKIILLTQKFSSPAIRMADIVLAMAKEENEINLGY 239 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 ++ AQ + D+L++ + + +++ Sbjct: 240 MTVRTAQLTIVDVLYLRVCAYLKDTVLSNMQNLNE 274 >UniRef50_C4KYQ0 Transcriptional regulator, RpiR family n=1 Tax=Exiguobacterium sp. AT1b RepID=C4KYQ0_EXISA Length = 267 Score = 180 bits (456), Expect = 7e-44, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 115/277 (41%), Gaps = 17/277 (6%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 +I+ Y + S+KK+ADYL+ + A ++ LAN S ++ +F +K+G + Sbjct: 3 EQIKHVYSEMTGSEKKIADYLMANMNEAIEMNITDLANAIATSPGTITRFCKKIGVGSYS 62 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 +LKL + + L + + + + T ++ +++L Sbjct: 63 SLKLMMQKTLTETNLPQTTSLEPMQ--------------RSYIELIQTTAHLIDQDELLA 108 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 + S+R + L G+G +GLVAQ ++L ++G A D H+++ + +D+++ Sbjct: 109 ICKEITSSRSVHLYGLGNAGLVAQEMEYRLRRMGLLATTAFDSHSMVMDASIVTSEDVVI 168 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 A S +G RE+ A G +A G+ + L + + L T I+ Sbjct: 169 AFSNSGESREVVQAMQLAKESGCTTVAFVGYQHSPLAELVDYRLLTAGASGEAFL--INT 226 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 D + L++ + E + + +L Sbjct: 227 QLPLLFTADAVTKTLMETN-EALKAHYLQTLKALDRL 262 >UniRef50_Q041H9 Transcriptional regulator n=22 Tax=Lactobacillus RepID=Q041H9_LACGA Length = 279 Score = 179 bits (455), Expect = 7e-44, Method: Composition-based stats. Identities = 61/279 (21%), Positives = 125/279 (44%), Gaps = 7/279 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + +I + ++ SD+K+ +L P +++ QLA A VS +S+ +F + L Sbjct: 3 NIIDKIYAQMSSMSTSDQKVGRTILKNPAVVINITISQLAKRANVSDASITRFCRNLSLS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ L++ + + + D ++ ++ K ++ATL+ EK Sbjct: 63 GFHELKILLAQCIGQKESESLKKL-----PKDDMQAALGEIEKNKVGEIHATLSQIPTEK 117 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASSPD 180 L + ++++ ++R I ++ G + VA + +K +IG + A ++ A Sbjct: 118 LEKILSIIEASRVIQISAEGDTYPVAADAVYKFNQIGLLSFASGGNVETADAQTMNLGRK 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D L+ IS +G L + KV++IT + + + + L T + + Sbjct: 178 DCLIVISNSGESAALLKEIKLAHKNKLKVISITNNPASPIALASDYHLKTGVRQTILQNQ 237 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + A + + LF+ LI+++ E E I+ E +V Sbjct: 238 YYFSRVAAFTIIEALFLLLIKRN-EKRIENIKQHEKIVS 275 >UniRef50_C2C459 RpiR family transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C459_LISGR Length = 284 Score = 179 bits (455), Expect = 8e-44, Method: Composition-based stats. Identities = 61/271 (22%), Positives = 116/271 (42%), Gaps = 4/271 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +I+ ++K +ADY+L L+ Q+LA + S +S+++F +KLG G Sbjct: 2 LLQKIKT-MTNFTNTEKVIADYILANTANMEQLTIQELARKTYTSHASIIRFTRKLGLDG 60 Query: 63 FPALKLALSEALASQPES-PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F + K+ L + + + + DD + + ++++ + + ++ E+K Sbjct: 61 FKSFKIELLKTNQQENHVLSEINPNIPFEHDDSILKISREMMELTQQTITESYHLLDEQK 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + L A+RI L +G S + A++F KL KI A D + +D Sbjct: 121 LFQATRQLYDAKRIFLFALGDSQIRAESFQNKLWKINQYAILATDRSEWAVHTANITSED 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ--ATNS 239 L ISY AA+ + G ++ +T + L + A C+ E Sbjct: 181 CALFISYDAKSPHDITAAEWLKSRGVPIILLTSHITSKLSKIADICIAVPNLEDKSELKI 240 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPER 270 A+ ++ A + +++F L Q D E + Sbjct: 241 ATFASQIAFDYILNVIFSTLYQIDYEKNKDY 271 >UniRef50_B9Y3J7 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3J7_9FIRM Length = 274 Score = 179 bits (454), Expect = 9e-44, Method: Composition-based stats. Identities = 51/282 (18%), Positives = 111/282 (39%), Gaps = 14/282 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ +I+ Y +S++++A Y L + QLA +A +++VV+F +K+G Sbjct: 1 MSIYSKIKDNYDVFTKSEQRVAKYCLDNYTEVAGNTLSQLAEKAHCGEATVVRFCKKIGN 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + + K L+E +S + ++ + ++ T+ E Sbjct: 61 ESYHDFKEELTEETQEHLKSEN-------------DSFVTQIYQNLRTSIEYTIQNLDLE 107 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ E ++ A I G+G SG+ A+ A +L++ G N +D H + Sbjct: 108 QIDEIAQLMNKADIIFCAGVGNSGIPAEACAMRLVRNGKNGIYFKDNHFQSIYLNELKRS 167 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ + S +G + A+ + + K + +T ++L +C+ Sbjct: 168 DIAILFSASGESNDTIHCAEILKQRKVKTVCVTSSVVSSLAVLCDYCILLKRWLGPLGGG 227 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA-LVKKL 281 S+ Q + DLL D + + + ++ K+ Sbjct: 228 SMIGQITQMYIADLLSTRTGMIDQKTTLKAKETTFDYIIDKM 269 >UniRef50_C3RI81 Sugar isomerase n=1 Tax=Mollicutes bacterium D7 RepID=C3RI81_9MOLU Length = 296 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 116/283 (40%), Gaps = 3/283 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + ++ + ++ ++ +A ++L S++ +A S ++V++ +KL + Sbjct: 1 MLIIEKLN-LKEKMSDGEESIAAFILTLGKELHKYSTRNIAEATLTSPATVIRLCKKLDF 59 Query: 61 KGFPALK-LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 KGF K L E + V + +D + K+ + T+ + Sbjct: 60 KGFDDFKEQFLKEINYLDQQYGKVDANFPFNRNDTMMKTAHKISHLYEDTVTDTMTLLHH 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L + + +L+++ I + G + +A++F K++KIG N +++ L V Sbjct: 120 DDLQKALRLLKNSNSIHIFSTGTALNLAESFKEKMLKIGKNVVISNNLNYQLYEVSCIPK 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-N 238 D+ + ISY+G A ++AIT F N L + AS L +E N Sbjct: 180 GDIAIIISYSGETINTIKIAQTCKNNKIPIIAITSFGENTLAKLASCKLTISTKESLYHN 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S A ++ D+L+ +D + + ++ L Sbjct: 240 LGDFSTHLATHLMLDILYSVFFLEDYDQNYDNKIKITKDLEAL 282 >UniRef50_A8RCR9 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RCR9_9FIRM Length = 289 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 67/283 (23%), Positives = 125/283 (44%), Gaps = 7/283 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RI L++S++KL +Y+L P +S+ L+ +S+ ++++F ++LG++G Sbjct: 6 ILTRIESLMPFLSKSEQKLGNYILTHPKDVTDMSTSALSQACDISEPTLIRFTRRLGFQG 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + KL LS S + ++ +D + KL ++ +TLN L Sbjct: 66 YKDFKLHLSANFISNQIDSTPV---KVNLNDSAIEIYRKLASFTINSLNSTLNTLDANDL 122 Query: 123 HECVTMLRSA----RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 + A R+I L+G+GAS ++ F K+M++ D+H L Sbjct: 123 ENATNYIYVAAKQNRKIFLSGMGASTVLIHEFQIKMMRLNIQTIFFEDIHLRLEACANLK 182 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 +DL + + G +E D K++ IT F + + ++A LYT E Sbjct: 183 KNDLFICFTTLGASKENYELIDIAHERKAKIIVITQFGNSQIAEKADIALYTSIIENNLR 242 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 AS ++ Q M+ D+LF+ + +D ++ K+L Sbjct: 243 LASQTSIILQSMVIDVLFLTIACKDYASITNSVKDFREKFKQL 285 >UniRef50_UPI00019054B9 hypothetical protein RetlB5_21050 n=1 Tax=Rhizobium etli Brasil 5 RepID=UPI00019054B9 Length = 259 Score = 178 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 67/267 (25%), Positives = 123/267 (46%), Gaps = 10/267 (3%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 + ++ +K+A ++L P T + S +LA EA S++SV++F ++LGY+GF KLAL+ Sbjct: 1 MTRALEKVAAFVLADPQTVLYKSITELAEEAESSEASVIRFCRELGYQGFQNFKLALAHE 60 Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR 133 LA+ + + + ++L++ A+ T + + + ++L AR Sbjct: 61 LATLQQPTASA----------PGDMVQELVETARTALEETERLLDRDAIQRVSSLLLDAR 110 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRR 193 I + G+ AS + AQ +KL ++G A RD H +S DDL + IS +G Sbjct: 111 HIEIFGVAASAITAQYLEYKLARLGIQAHIPRDSHLATMASATASADDLYILISSSGSTI 170 Query: 194 ELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTD 253 + A+ G KV+AIT T + L L + E + + +Q ++ D Sbjct: 171 DTLRVAESAHARGAKVIAITNRTKSPLAAICDFKLLASSPETPLTGGAFPSKISQLLIVD 230 Query: 254 LLFIALIQQDLELAPERIRHSEALVKK 280 L + + D +E++ + Sbjct: 231 ALANTITKLDPARLKTIKETAESVSDR 257 >UniRef50_Q1J381 Transcriptional regulator, RpiR family n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1J381_DEIGD Length = 286 Score = 178 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 55/253 (21%), Positives = 105/253 (41%), Gaps = 12/253 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L R+ L + +++A Y++ P+ + + +LA AGV +S+V + ++LG+ Sbjct: 18 SALARLHAERAQLPPTLERIAAYVVAHPEEVIYQTITELAATAGVVESAVTRLCRRLGFS 77 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF A K+ALS ++ + + ++ A+ T V Sbjct: 78 GFHAFKIALSGDVSQAQGAAEATDPFSVA------------ARQAVQAIEGTRQVADPAA 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + +A R+ + G SGL AQ A KL ++G A A D H SP Sbjct: 126 LERVAQAIAAATRVDVVGQSNSGLSAQFLANKLARVGVPAFAYTDPHLAAVAAATQSPRG 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++ + +G + G +A+T + + + A L T + E + Sbjct: 186 VVVGFTRSGSTIDTVQTLRLAASKGACTVAVTHRASSPVTRYAREVLATSSPESPLAGGA 245 Query: 242 ISACHAQGMLTDL 254 +S+ +Q +L + Sbjct: 246 LSSLVSQVLLVEA 258 >UniRef50_A9BEU1 Transcriptional regulator, RpiR family n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BEU1_PETMO Length = 269 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 55/267 (20%), Positives = 117/267 (43%), Gaps = 12/267 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +I+ Y L +K+ A Y++ +P H S +L+N AG S++++ + +K+GY G Sbjct: 2 VTSKIKGIYNSLTNKEKQAAQYIIERPGDVIHYSITELSNWAGTSETTIYRVLKKVGYSG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + KL L+ L++ + + + + A+ L +K+ Sbjct: 62 YQKFKLELARELSTPTLDSKES-----------KDLFDMIYNRTVNALTDILRQVDRDKI 110 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 ++ ++++++ +G S +A + + K +GF + A D H + DD+ Sbjct: 111 THASEIIMNSKKLLFYAVGRSFPIALDASLKFAALGFASTAYSDPHMQVIVASNLEKDDV 170 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++AIS++GV R+ +A G + +T + L + + LYT A E S Sbjct: 171 VIAISHSGVIRDTYKSAQVAKEAGAFTIGMTAGVNSPLSKIVNLVLYTSA-EMPQESEFT 229 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPE 269 + + + +LL+ ++ + E Sbjct: 230 VSRIGEMFMVELLYNSVASKMSLKNKE 256 >UniRef50_B0NJ36 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NJ36_EUBSP Length = 277 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 128/279 (45%), Gaps = 9/279 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I++ Y+ + +++K+AD +L P+ + ++LA +GVS+++VV+ Q GY Sbjct: 5 SVIDNIQKHYREFSPTERKVADCVLRHPNQVTEYTVKELAMASGVSEATVVRMCQHAGYT 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + L+ + + + + D+ + + ++ M + + Sbjct: 65 GYWPFRTMLARDMG--------MMGREEKRDNDQANIVAGIFRKYADIMQNLSSKIDLDA 116 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + C ++ + + + G +G +A++ + L +IG A L T+ + +D Sbjct: 117 MSTCARLIDNCHEVHVIAAGDTGTLAKHMGFCLGRIGIKATYSGLADYYLNTINLADEND 176 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L+AIS +G+ + + A+ G KV+AIT + + L + A H L + + + Sbjct: 177 VLIAISKSGITKTVIQGAELAKEKGLKVIAITEYGNSKLGELADHVLLSKGDSSRFDYYK 236 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ + + L + L++ ++ +R E ++ + Sbjct: 237 NYNHLSETAVIEAL-LELVKNVDKIVEKRADQLEFMLSE 274 >UniRef50_B2UK47 Transcriptional regulator, RpiR family n=5 Tax=Ralstonia RepID=B2UK47_RALPJ Length = 280 Score = 178 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 60/232 (25%), Positives = 111/232 (47%), Gaps = 7/232 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + RIR L+ +++++AD++L QP T L +A EAGVSQ +V++F + +G Sbjct: 16 DLRERIRAARPSLSPAERQVADWVLRQPGTVLSLPVAAIAREAGVSQPTVIRFCRSMGCH 75 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G KL L++ A+ + + + +++++ A+ A + Sbjct: 76 GLSDFKLRLAQGNAAHDKPRGAAAPSNVPRSGT------RVLQDTIDALAAMRDRFDPLA 129 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V ++ +A RI L G G+SG+VA++ K + G A A D + + ++ D Sbjct: 130 LDAAVALVDTAHRIDLYGFGSSGVVARDAQTKFFRYGIPANAYSDPYLVSMSLNVLQAGD 189 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE 233 +++AIS +G EL A + + +G V+A+T + L A L + Sbjct: 190 VVIAISKSGALPELQTAVERVRELGVHVIAVTA-PGSPLAALADVVLPADVD 240 >UniRef50_B1QVU2 Transcriptional regulator, RpiR family n=9 Tax=Clostridiales RepID=B1QVU2_CLOBU Length = 275 Score = 178 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 45/278 (16%), Positives = 110/278 (39%), Gaps = 14/278 (5%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + +I Y+ +K +A++ + + SS+ ++ + VS++++ +F++K G+KG Sbjct: 8 IIPKIESLYENFTPLEKTIANFFIHNTEKI-DFSSKNISKKLFVSEAALSRFSKKCGFKG 66 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + + +P + + ++++ + + + EE++ Sbjct: 67 YREFIFLYEQNFVEKPSNVTTNYT-------------KQVLDTYQELLNKSYALLDEEQM 113 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + +R+ + G G+S L AQ + M+IG N ++ D H + + D L Sbjct: 114 VRITKLFNQKKRVYVYGRGSSALAAQEIKLRFMRIGVNIESIVDSHIMKMNFVLLNSDCL 173 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ IS +G E+ + + IT ++ + +E N +I Sbjct: 174 VIGISVSGKTDEVLDSLRAAKSRNATTVLITSRKEKEFEEFCDEIILLAVKEHLDNGKAI 233 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 S ++ D+ + +Q D E ++ + Sbjct: 234 SPQFPILVMVDIFYAHFLQSDKFHKQELHDYTLNALHN 271 >UniRef50_C2KAY2 Transcriptional regulator n=6 Tax=Lactobacillus RepID=C2KAY2_9LACO Length = 281 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 72/280 (25%), Positives = 137/280 (48%), Gaps = 3/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N +I Y L ++ K +AD +P + + Q+L S +SVV+F + LG+K Sbjct: 3 NLANKISDVYPNLNKTSKLIADVYFKEPRIFLNKNLQELGTITQTSGASVVRFCRNLGFK 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF ++A ++ + ++ + I +D V KL + + Sbjct: 63 GFKDFQIACAQEMPNKQ---DAMVDTIINTNDEPTSVLYKLQLSLGKNIADIGKTIDHKS 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V ++RSA++I + G GASGL AQ+ +KL++ G N V+ H L V + +D Sbjct: 120 LDAAVDLMRSAQQIYVAGEGASGLAAQDLFYKLIRSGKNVNFVQSSHIALEQVANINKED 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L+ SY+G+ +E L A + + K++A+T + L+ A + + E+ + Sbjct: 180 ILIVFSYSGLTQEPLLMAKQAQKNNAKIVAVTRIQDSPLKNMADTVITLPSNEKLLRYGA 239 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 I++ A+ + LL+++LI +LE +++ ++ L +L Sbjct: 240 INSLFAEIFASSLLYLSLISPNLEELNMKMKTTQNLTNQL 279 >UniRef50_C0X0S9 RpiR family transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X0S9_ENTFA Length = 285 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 55/285 (19%), Positives = 122/285 (42%), Gaps = 4/285 (1%) Query: 1 MNGLLRIR--QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 MN L I ++ + ++ + D++L + H+S +LA S S++V+ +K Sbjct: 1 MNPLNLIECLEQKERYTYNEGLIIDFILSHTERVLHMSIYELAEATNSSTSTIVRLCKKT 60 Query: 59 GYKGFPALKLALSEALASQPE-SPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 GF K+ LS L + +V + D L+ +K+ + T + +T + Sbjct: 61 ETSGFKEFKIRLSRDLEIHYQAIRNVDANMPFLAQDSDLLIAKKIAQLTTETVQSTQQLL 120 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 +E L++ + +L +A I+ G+ S + +F KL++I + + Sbjct: 121 TEAMLNKSIDLLLTAENILAVGVSNSYIRLTDFQTKLLRIQLFIHLIPYQAEQFYLAINA 180 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQA 236 + +D+ + +SY+G E+ A G ++AIT + L + A+ L E Sbjct: 181 TKNDVAILVSYSGNTAEIVNEARIFAEGGTPIIAITSDLNSQLAKYATVILPIPNVEHAD 240 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++ S+ A + ++L+ + ++ + +++ + K Sbjct: 241 FKVSTFSSQLAIEYILNVLYSCIFSRNFDKNYTSQKNTPTSILKF 285 >UniRef50_A9WVK2 Transcriptional regulator, RpiR family n=2 Tax=Micrococcineae RepID=A9WVK2_RENSM Length = 346 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 55/248 (22%), Positives = 107/248 (43%), Gaps = 2/248 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + R++ + ++ + K+A YL+ +P LS ++LA+E G S ++V +F + +GY G Sbjct: 37 VVNRLKAQLPEMSGAMSKIARYLIEKPLAPLELSIKELADETGTSAATVTRFCRLIGYTG 96 Query: 63 FPALKLALSEALASQP--ESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + ++ ++ L ES I DD R V L+ + ++ T V Sbjct: 97 YAPFRVGVASDLGRSDARESWKTDIGRAFGPDDSPRDVLSTLMNAHARSLQETAAVLDLR 156 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + + + + GIG S ++A+ +L +IG +++A L + + Sbjct: 157 LMKNLARRIALSEHVDIYGIGGSAVMAKELQNRLYRIGIPCHHCTEVYAGLTSASLQNSQ 216 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 + + IS TG E + G +A++ + L + A + T EQ Sbjct: 217 CIAIGISNTGRTEETIQMLRQAGLAGATTVALSNNPNSTLAESADFQITTSVHEQFLQPD 276 Query: 241 SISACHAQ 248 +SA H Q Sbjct: 277 DLSAKHVQ 284 >UniRef50_Q03HW7 Transcriptional regulator n=13 Tax=Lactobacillales RepID=Q03HW7_PEDPA Length = 295 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 55/282 (19%), Positives = 121/282 (42%), Gaps = 3/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + ++ ++ +++++ADY+L ++ +L+ S S+VV+ +KLG+ Sbjct: 1 MLLIDKL-SNHENFTNTEQRIADYILKNITDIPPMNIDKLSKVTYTSHSAVVRLTKKLGF 59 Query: 61 KGFPALKLALSEALASQPESPSV-PIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 +GF K+A+SEA+ SQ + + + +D + + +K+ + + ++ T E Sbjct: 60 EGFKDFKVAISEAVYSQTTNMNSVDANFPFDSNDSVSTISKKVAELSVESIQRTFAQLDE 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + E + + RI L G S + A++F KL+K+ A + T + Sbjct: 120 RLIEEAANTIAKSERIFLFAQGDSQIRARSFQNKLVKLNRFAILGEEYSDEDWTAANLTK 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-N 238 D + ISY G + + +TG + L + A + T E Sbjct: 180 KDCAIFISYGGRISQYERMLTHFSENKIPSVVLTGNQKSPLIRLAQTAIVTTQNEYDFLK 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ S+ L D +F + ++ + +++ L+++ Sbjct: 240 ISTFSSQITFEYLLDTIFSVIYAKEYQQNIINLKNKFNLIQR 281 >UniRef50_B7IEI4 Transcriptional regulator, RpiR family n=1 Tax=Thermosipho africanus TCF52B RepID=B7IEI4_THEAB Length = 290 Score = 177 bits (449), Expect = 3e-43, Method: Composition-based stats. Identities = 58/277 (20%), Positives = 121/277 (43%), Gaps = 16/277 (5%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + +++ Y L +++K+A Y++ PD H S +L+ A V ++++ + ++KLGYKG Sbjct: 19 IIEKLKAIYDQLKPAERKIARYIINYPDDVIHHSISELSELAKVGEATISRISRKLGYKG 78 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F ALK+ L++ L+S + +I E ++ + +E ++ Sbjct: 79 FQALKIELAKELSSISFEETKT---------------NSVISEVIESLNKLSKIINENEI 123 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 ++ + + +I G+G+SG+VA+ A + GF A D H + + + Sbjct: 124 NQIAKKVVESNKIFFFGVGSSGVVAEYGALLFTRGGFFANYYNDPHMQVISAAGMDNQTV 183 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + IS +G R+ + +AITG + + + +Y I Sbjct: 184 VFGISSSGNIRDTVKSMKVAKDSKAFTVAITGGYESKITEVVDKTIYIPPAGLERGMPKI 243 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S +Q + ++F ++ + A E I+ + +K Sbjct: 244 SPIVSQISILHMIFEEVLS-LKKEAIEIIKKANTTLK 279 >UniRef50_A8U5E8 Putative uncharacterized protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8U5E8_9LACT Length = 268 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 55/278 (19%), Positives = 115/278 (41%), Gaps = 17/278 (6%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + RI Q Y L++ +K++A ++L + + L+ S +++ +F KL Y+ Sbjct: 6 DLSNRINQNYSLLSKKEKQVAAFILEHKKDIESWNIKDLSRLTETSNATISRFCAKLSYR 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F K +++ L+ P VP+ K+ T +++ + ++ Sbjct: 66 NFNEFKTFVTQELSGNPTPLQVPV---------------KIASYYTQLIHSASQLIETKQ 110 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 +++ V + + +I++ G+G SGL A ++L+++G V D H +L D Sbjct: 111 INDFVEAIHLSNKILICGVGNSGLSAMELKYRLVRMGLIVDVVTDPHMMLMDAVLLKKYD 170 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++AIS G + + A + V IT L + A L+ + Sbjct: 171 LMIAISNYGQTQAVIDACTIAKKEDATVFVITNQNHTPLTKIADQVLFASGRTSIPDEQF 230 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 I++ + D+L L++ + E R + + Sbjct: 231 INSQLPIHFILDVLCYVLLEN--KSYKENRRKTLTAID 266 >UniRef50_Q1YGT9 Putative transcriptional regulator, RpiR family n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YGT9_MOBAS Length = 305 Score = 177 bits (448), Expect = 4e-43, Method: Composition-based stats. Identities = 62/282 (21%), Positives = 119/282 (42%), Gaps = 6/282 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + R+RQ + ++D+ +AD LL D A S + +A AGVS+ SV++FA+ +G + Sbjct: 17 SLIDRMRQELPAMKRADRAVADALLENIDAATRSSVKAVAGRAGVSEPSVIRFARHMGCE 76 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF K+ L++ A S + + V + + + A+ + Sbjct: 77 GFSDFKIRLAQDYAIGRMYLSADYQHPAK---TGSDVAGHVYEATSQALASAFAQRDPAA 133 Query: 122 LHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L ++ +RR+ G+G S VA +L ++ A+A D + T + D Sbjct: 134 LDRAADLIDGSRRVFCFGVGGSSANVAAEAENRLFRLDLAASATADAYKQRITAATAGKD 193 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY-TIAEEQATNS 239 D+ L S TG R L +A + G ++A+T L A + +E+ Sbjct: 194 DVFLMFSVTGRPRSLIESARSAKQCGASIIAVT-TAGTPLAIEADVLIPLIAFDEEKFFY 252 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + Q + D L L + ++ ++ ++ ++ L Sbjct: 253 MPNRGRYGQLFILDCLATLLGGRRMKHISSKLWNARTMLADL 294 >UniRef50_B9Y4T6 Putative uncharacterized protein n=2 Tax=Holdemania filiformis DSM 12042 RepID=B9Y4T6_9FIRM Length = 277 Score = 177 bits (448), Expect = 5e-43, Method: Composition-based stats. Identities = 72/275 (26%), Positives = 135/275 (49%), Gaps = 6/275 (2%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 +++Q L Q++K +AD+ AR +S QLA+ + QS++++F++KLGY+ F Sbjct: 4 EKLKQVQNELTQTEKIIADFFQNHSLEARSFTSYQLADRLNIGQSTIIRFSKKLGYRSFR 63 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 L LS +L + + +I ++ +K+I++ TL N + + + Sbjct: 64 ELLEDLSTSLTEEK------VKEEIVVNEGTSSTNQKIIQQYQKMAQLTLEFNPPQVIDQ 117 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 V+ L+ AR+II+ G G S L A+ + + +K+G ++ + H + + + P D+L Sbjct: 118 TVSALKKARKIIVFGFGNSNLFAEYISNQWLKMGLDSFCSANSHIIFSMLSQFGPQDVLF 177 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 IS +G E+ AA V+A+T N L + L T+ E T +++ Sbjct: 178 LISESGETPEILKAARIAGHQNVTVIAMTRIQKNRLHGYSDIVLKTVNYETNTRLNAMTL 237 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +Q L D++++ L + D E + I SE L+ Sbjct: 238 RCSQLCLLDMIYLNLYKTDFEHYEKIIAESEKLLD 272 >UniRef50_C9A857 Transcription regulator n=3 Tax=Enterococcus casseliflavus RepID=C9A857_ENTCA Length = 297 Score = 176 bits (447), Expect = 7e-43, Method: Composition-based stats. Identities = 64/281 (22%), Positives = 126/281 (44%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M ++R +GL ++K++ADY+L + L+ + +A S SSV++ A+K+GY Sbjct: 1 MLLGDKLR-LQEGLTNTEKRIADYILQNINDVPSLTIEVIAKHTYTSHSSVIRLAKKMGY 59 Query: 61 KGFPALKLALSEALASQPESPS-VPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 +GF + +L L+E +Q +P+ V + D + +K+ +++ T + Sbjct: 60 EGFKSFRLGLAEIAHNQMFNPTFVDANFPFSPKDQTPDILKKMADLTINSIHKTHAQVAP 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E + V L +A+RI L G S + A++F KL+KI + + Sbjct: 120 EMMEAVVQSLEAAQRIFLFARGDSQIRARSFQNKLVKINKYLILADEYGDDAWNASNVTQ 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-N 238 +D + I+Y G + VG V+ I+G + A+H + +E+ Sbjct: 180 NDCAVFITYRGKNTQYEKIMQHFRDVGVPVIVISGNAHAKIIPLATHAIIASHDERDFLK 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + S+ A + D LF L ++ + +R + +++ Sbjct: 240 VGTFSSQVAFEYILDSLFALLYAKEYQKNIVELRKKQTVLE 280 >UniRef50_Q1GCY7 Transcriptional regulator, RpiR family n=2 Tax=Rhodobacteraceae RepID=Q1GCY7_SILST Length = 300 Score = 176 bits (447), Expect = 7e-43, Method: Composition-based stats. Identities = 61/278 (21%), Positives = 121/278 (43%), Gaps = 5/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + +R+ A ++K+AD++ + +++ +LA GVS +VV+F + +G Sbjct: 13 DLISNLRELNGSFAAREQKVADFVSAHLEEISNMTIAELAGAVGVSTPTVVRFCRSMGCD 72 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF KL L++ LA + + + ++++ A + E+ Sbjct: 73 GFREFKLRLAQNLAVSLQYLAPSQREV---PEGGAGAVDQVLGALYATVNVMRQQLVPER 129 Query: 122 LHECVTMLRSARRIILTGI-GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L L +A +I++ G+ G S +VAQ A ++ ++G A ++ D + L Sbjct: 130 LDAAAAALAAAGQIVVAGVGGGSTMVAQEAANRMFRLGIPAVSISDSYLLQMRAATLVKG 189 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+LL +S +G E+ AA G V+AI + L Q A+ + E Sbjct: 190 DVLLLVSASGAADEIVSAAAIAGGYGATVVAI-ARPGSRLAQEATVAIEADLPEDPDILK 248 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++ +A ++ D L +++ Q E +R A + Sbjct: 249 PTASRYAHLVIVDALAMSVAQARTAATTENLRRIRASL 286 >UniRef50_A1HTD9 Transcriptional regulator, RpiR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HTD9_9FIRM Length = 282 Score = 176 bits (446), Expect = 8e-43, Method: Composition-based stats. Identities = 61/278 (21%), Positives = 129/278 (46%), Gaps = 7/278 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I++ Y G++ S KK+A+YLL D A L++++L GVS+++V++FA L YK Sbjct: 4 SLVKNIQEHYHGMSASHKKIAEYLLDHYDKAVFLTAKELGQTLGVSEATVIRFAVALNYK 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L+ AL + + ++ + ++ D + K + + + + T+ + Sbjct: 64 GYPELQQALQDMVKNKITTVERL---RLALLDGQTNLPHKALSTDISNIQLTMEEVTSAD 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V + AR I + + ++ + + L + N+ + + ++ + P D Sbjct: 121 FEKAVNEIIQARNIYIVSLRSATALGYFLHFYLQLLLQNSRLIHGVGTFFEEIRPAGPGD 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++ IS+ R+ G +VLAIT + L + H L +++ + Sbjct: 181 LVIGISFPRYTRQTVEGLKYARENGARVLAITDSLTSPLAPYSHHVLTARSQQISF---- 236 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 I + A L + L +A+ +D + +R EA+ + Sbjct: 237 IDSFAAPLSLINALILAVGARDSAKTADVLRQMEAVWE 274 >UniRef50_C0XD02 RpiR family transcriptional regulator n=1 Tax=Lactobacillus gasseri JV-V03 RepID=C0XD02_9LACO Length = 294 Score = 176 bits (446), Expect = 9e-43, Method: Composition-based stats. Identities = 60/282 (21%), Positives = 113/282 (40%), Gaps = 3/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M ++R++ ++ ++K +A+YLL + + + +A + S S++++ KLG+ Sbjct: 1 MLIKDQLREKK-NMSNNEKIVANYLLKADENIEKDTVRTVAEKTYTSPSTIIRLCHKLGF 59 Query: 61 KGFPALKLALSEALASQP-ESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 GF K + + +V ++ R +D R V K+ + T V Sbjct: 60 TGFSDFKNKFLNEVKYFNLQFQNVDVNFPFRREDTAREVMSKITDLYIETIKDTEKVVDM 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 L C + + I + G A +F K+MKIG +++ L + Sbjct: 120 RTLLRCRKICSESEEIHIFSYGTYLNQAYSFKEKMMKIGKKVMISSNLNYQLYEAEIMQA 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-N 238 D+ + ISY+G L A + + +AIT N L + LY +E N Sbjct: 180 GDIAIIISYSGETNNSLLIAKQCRKNNIPTIAITSIGENDLTKICDETLYISTKESLYKN 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 S + + D+L+ + Q D E E + ++K Sbjct: 240 IGDYSIHLSVSYVLDVLYSLIFQNDFEHFYETKMNLAMSLEK 281 >UniRef50_D1C9F1 Transcriptional regulator, RpiR family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C9F1_SPHTD Length = 290 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 106/279 (37%), Gaps = 6/279 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RI +RY L+ +++A ++ S+ +L V ++VV+ AQ LG+ G Sbjct: 6 LQRRIAERYDQLSPKQRQVARFIADNEAFTAFASAAELGKAVDVDAATVVRLAQSLGFSG 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + L+ + + + + + D + + ++ + + TLN E + Sbjct: 66 YAELQGVIRGRIPERLTFVQRIEQQRQQPMDR-QQLPVQVFTNDIENLNQTLNQTQPEAI 124 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSPDD 181 V + A +I+ G+G S VA L +G + L T+ P D Sbjct: 125 EAAVEAICRADHVIVVGMGFSAAVAVFLGHGLNSLGIRTTVLTEGGSTLTITLANLRPTD 184 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++ +S R+ A G +A+T + + + A H L + + Sbjct: 185 LMIGVSVWRYLRDTVAALAGAAERGVPTMALTDSSVSPPARIADHVLVAATRGVGHSLSP 244 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + +LL + ++ E A +R + L ++ Sbjct: 245 ----VGLIAVVNLLLAEIAVREPERALAVLREVDRLYRE 279 >UniRef50_A8S4W0 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S4W0_9CLOT Length = 283 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 55/280 (19%), Positives = 106/280 (37%), Gaps = 6/280 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + I +RY+ L +S K +AD+LL + ++A+ G+S +S+++F++ +GYK Sbjct: 3 NIIDEINKRYENLTKSQKIIADFLLENYALVPFETLNEIAHRIGLSTTSLIRFSRTMGYK 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + LK + + L S + + + ATL + EK Sbjct: 63 DYTDLKKNI-QDLIKVKVSLPSRFGELSEQGGTPNDLLLRCRDIAVNNIEATLRLQDTEK 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASSPD 180 L V + SA + G+ A A L +I ++ + Sbjct: 122 LDLAVDWISSANHNYVLGLRTCFSPAFYLAVVLSQIKKKVRLIQGIASTYPEEITDVEEG 181 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ S+ +E A M R G KV+ ITG ++ + A + Sbjct: 182 DVCTVFSFPRFYKETVNIAHFMRRRGAKVIIITGKDIRPVKPYGDIIIPCSAVGPSFKD- 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + A L D + ++ ++ + E + E ++ + Sbjct: 241 ---SYVAVHFLIDYIISSIAAKNKDEGIEVVSKIEEILSQ 277 >UniRef50_C2L0R5 Possible transcriptional regulator RpiR n=1 Tax=Oribacterium sinus F0268 RepID=C2L0R5_9FIRM Length = 314 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 116/283 (40%), Gaps = 5/283 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I+ Y + ++ +K+ADYL+ D + +LA +GVS +SV +F + +GYK Sbjct: 27 SVIPEIKSLYPQMNEAMQKIADYLIDTEDKKCVERASELARRSGVSTASVSRFVKMMGYK 86 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGD-DPLRLVGEKLIKENTAAMYATLNVNSEE 120 F +L + + ++ + + + ++ + T + + Sbjct: 87 EFRDFRLKIVMEKQEENRQEENELNYNGEPITGDAHSICKTIFSKSVRELEETWGILDFD 146 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + ++ ARRI++ G+G S + + +L +IG+ D H ++ Sbjct: 147 TMQTVADLIHEARRIVVIGVGRSKVTMEALYSRLYRIGYPIMMFSDAHEIVNITSIMEKK 206 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L+ +S G + + A + G +V+ I+ + L + + + L++ + Sbjct: 207 DILICVSNFGQSKSVVEGARRAKKRGIQVVGISSIKESPLAKISDYTLFSAYDYNNAQDG 266 Query: 241 ----SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S AQ ++ D L++ + ++ + + Sbjct: 267 NLFDPSSENLAQLVIVDCLYMLVAHKNKRKNITYFKTFSNEIH 309 >UniRef50_Q71W74 Phosphosugar-binding transcriptional regulator, RpiR family n=17 Tax=Listeria RepID=Q71W74_LISMF Length = 283 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 66/283 (23%), Positives = 120/283 (42%), Gaps = 3/283 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L++IR+ L S+K+LA+Y+L P ++LA A VS +++ + KLG Sbjct: 1 MNILIKIRE-LTNLTNSEKELANYILANPKKTLQCKPKELATAAFVSAATIYRLINKLGL 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G LK+ ++ +L E + I D + L + + TLN E Sbjct: 60 NGIGELKIEIASSLRETNEEKDLNYDYPILESDTPYQIMTNLNQIYKGTIDETLNNADPE 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L + L A+ I + A+ AQNF +++ +IG + + + S + Sbjct: 120 ELVKIGEKLIQAKTIDVYAASANLFFAQNFKFQMQEIGVLVNVPEEDYIQSLSAANSDEN 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN-S 239 + + +SY G R L + ++ IT N L + A+H +Y + E N Sbjct: 180 HIAIVVSYGGRSRTLQRVVKILSENNVDIILITSMQDNPLVEFATHKIYMASAENHYNKV 239 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERI-RHSEALVKKL 281 +S S + + D L+ Q+ E + + + + +L Sbjct: 240 SSFSTRQSLLSIFDTLYSIYFNQNYEKNIQYKTTNYQKMNTEL 282 >UniRef50_C3RM35 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RM35_9MOLU Length = 284 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 61/271 (22%), Positives = 127/271 (46%), Gaps = 2/271 (0%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 + ++ L Y+L + ++S+++LA S +S+V+F +KL Y+G+ K+AL+ Sbjct: 3 NNFSSVERILGKYVLENGEKVLNMSTKELAKATFTSPASIVRFCRKLEYEGYNDFKIALA 62 Query: 72 EALA-SQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 L S+ + + + +G D + V + + ++ T+ E+L V M+ Sbjct: 63 AQLQYSRLSNDDINANYPFKGTDSVYTVASNIANLSKESIDITMKNLDLEELRLVVLMIT 122 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 A+ I + G+ +A +F +K+ +IG + + ++ L S+ + L + ISY+G Sbjct: 123 KAKVIDIYGVSGPLRIASDFQYKMFRIGKDVRISQMINEQLFQAAQSTSEHLAILISYSG 182 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN-SASISACHAQG 249 E+ AA + R +AIT F N L + LY + E + A+ S+ + Sbjct: 183 ETEEVIEAAKILYRRKIPAIAITSFGENRLVKYTQRVLYLNSSEFIYSKIATFSSTLSLH 242 Query: 250 MLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +L D+++ + ++ E ++ L+ Sbjct: 243 LLLDIIYGCVFSKNYEDNLNYKIETDNLIDH 273 >UniRef50_C0D858 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D858_9CLOT Length = 275 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 112/258 (43%), Gaps = 6/258 (2%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 ++R L +++ A+YLL LA EA VS+++VV+ K+GY G Sbjct: 12 KLRGVIGSLGAQERRFAEYLLNSFAGIEKEPIAVLAKEAQVSEATVVRVCHKMGYSGLKE 71 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 LK+ ++ + + + E++ A+ T+N+ E+++ + Sbjct: 72 LKIVVARENETAGSFDGGIGGQY------MDELKERVFMGAIRALQDTMNLIDEDEVEKA 125 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 +L +A I + G+G S VA++ +LMK+G + + + + + D+ + Sbjct: 126 TKVLCNANYISIYGVGGSVPVARSLKHQLMKLGIPSNVYNEFQPTIIAAEKYNKGDVAIG 185 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 IS++G ++ A G + IT + +A+ + +T +E + A Sbjct: 186 ISHSGESSQVVEALRIARGKGATTICITSYGDSAITHCSDVKFFTTSETLLNGGDNSLAR 245 Query: 246 HAQGMLTDLLFIALIQQD 263 AQ + +LL++ + + Sbjct: 246 IAQTSIINLLYLNVALKY 263 >UniRef50_C9XPJ9 RpiR-family transcriptional regulator n=5 Tax=Clostridium difficile RepID=C9XPJ9_CLODC Length = 250 Score = 174 bits (441), Expect = 3e-42, Method: Composition-based stats. Identities = 53/263 (20%), Positives = 112/263 (42%), Gaps = 15/263 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + ++ + L+ ++ L +Y L + + +ANE S + +V+F QKLG+ Sbjct: 1 MNLIDKLDINQKKLSTNEISLLNYFLKNSEKINQKKIKDIANETFNSTAYIVRFCQKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ K L + +++ E + ++ T N+ + E Sbjct: 61 SGYSEFKNFLVFSYSNRNERNKEFTK-------SQSDIFTDVMD--------TQNLINVE 105 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + C+ + +++ I G+G+S LV + + IG N D + + D Sbjct: 106 NIDMCLNEIHNSKHIYFFGVGSSRLVCTEMSQRFSAIGVNVKYYDDSTLMYLAASNITKD 165 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++A+S +G ++ A + KV+++T + N+L A L+ + + NS Sbjct: 166 DLVIAVSMSGETAQVIKACNIAKTNQVKVISLTNISVNSLSNIADIKLFVSSPQYNFNSV 225 Query: 241 SISACHAQGMLTDLLFIALIQQD 263 + ++ L + +F I++ Sbjct: 226 NYTSRVPALSLMEYMFHKYIEKY 248 >UniRef50_C7T7Y4 Transcriptional regulator n=8 Tax=Lactobacillus RepID=C7T7Y4_LACRG Length = 315 Score = 174 bits (441), Expect = 3e-42, Method: Composition-based stats. Identities = 72/282 (25%), Positives = 136/282 (48%), Gaps = 4/282 (1%) Query: 1 MN-GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M L +++ + L+ ++ LADY+L + ++ Q+A +GVS +SV++F + Sbjct: 1 MKALLAKVQAQLPQLSPVNRALADYVLTDAEAFIAQTTAQIARASGVSAASVIRFVRLFD 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 Y + KLAL P+ ++ DD L + KL + AA+ + + Sbjct: 61 YPDLQSFKLALVRD---TQAPALTPLDPLVQDDDDLPTMMRKLSQTAIAAVRDLPDELDQ 117 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + +T LR AR I L G+ AS LVAQ+ KL++ G+ A D H L V ++ Sbjct: 118 AAVQTAITTLRHARHIYLVGMSASALVAQDLYLKLIRAGYLAIFDADAHTALERVYYTTA 177 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D ++ SY+G+ +E+ LAA + R V+ +T P+ L+ AS + E Sbjct: 178 ADAVVVFSYSGLTKEVVLAAQQARRNQTPVIVVTRAEPSPLRDAASCVIALPPTEPLLRI 237 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++++ + + ++LF+ ++ +++ + R + L +L Sbjct: 238 GAVTSMFTETYVANILFLGVVHGEIKQTEQNYRATSQLTGEL 279 >UniRef50_UPI000196B715 hypothetical protein CATMIT_00151 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B715 Length = 282 Score = 174 bits (441), Expect = 3e-42, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 120/277 (43%), Gaps = 3/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + I Y S+KK+A Y++ +++ L+ +G S++SV +F +++G K Sbjct: 4 NVIDEIYSSYDHFFDSEKKIAKYIMHHTSEVVNMTVGDLSQASGASEASVSRFCKRIGLK 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK++L++ L P + + + + ++ + T+ + K Sbjct: 64 GFHHLKISLAQELVEIPSCNTTISNRI--SITDVNNSLDSILANKVEELTQTITMMKSNK 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L E + + +R I +G + VA + +K +IG ++ + L + S +D Sbjct: 122 LDEILDCILKSRHIYFVAVGNTVPVALDGCFKFNQIGIPSSTSSILETELGMILNVSKED 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++AIS +G + A E L+IT +++ + + + T E+ Sbjct: 182 MVIAISNSGESSGVLTAIKEAHNQKATTLSITNSDKSSIALESDYHITTATREKVYLEGY 241 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + + + ++L++ L E A E+ E L+ Sbjct: 242 CFSRVSATAVIEILYLFLTT-MKEDAHEKSAQHEDLI 277 >UniRef50_C8ZYC7 Sugar isomerase n=4 Tax=Enterococcus RepID=C8ZYC7_ENTGA Length = 306 Score = 173 bits (440), Expect = 5e-42, Method: Composition-based stats. Identities = 59/282 (20%), Positives = 116/282 (41%), Gaps = 4/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M ++RQ LA +++ L D+LL P + ++L+ + V S+ ++ A+KLG+ Sbjct: 1 MLLQEKMRQI--KLAPAERSLIDFLLANPTAMADQTIKELSEKTYVHPSTFIRIAKKLGF 58 Query: 61 KGFPALKLA-LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ LK A L E V + D + + +KL K + TL++ Sbjct: 59 NGWLDLKTAFLEEQTYMSSHFTDVDANFPFSSHDGIMTIAKKLAKLEQTTIEDTLSLIHH 118 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++L + L +A I + A+ L++Q+F K+ ++G N + Sbjct: 119 DELQKAKQSLLNASHIKIFASNANTLISQDFVLKMRRLGKNIHVCDTFGESAYEASNCTS 178 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN- 238 D + ISYTG + + + ++ +T NAL + + L E+ + Sbjct: 179 DTTAILISYTGENKMIKEIGKILAERQVSIIGMTSIGENALAKLSDCVLNITTRERLYSK 238 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A+ + + L D+L+ + + E + + K Sbjct: 239 IANFTINTSVCYLLDVLYGIVFSEHYEKNLQHLIDIGMAYDK 280 >UniRef50_C8N6B7 RpiR family phosphosugar-binding transcriptional regulator n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N6B7_9GAMM Length = 273 Score = 173 bits (439), Expect = 6e-42, Method: Composition-based stats. Identities = 49/274 (17%), Positives = 105/274 (38%), Gaps = 17/274 (6%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I Q + ++K+ADY L +T + + LA GVS++++ +F+QK G++G L Sbjct: 12 IEAHLQEFSPVERKIADYFLGGGETPPEETGKALAKRLGVSEAALTRFSQKCGFRGLREL 71 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 + + + ++ + T + ++ Sbjct: 72 -----------------FYAHNQTENHGGSDFVQPVLASYQELLNKTYAIIDMRQIRRIT 114 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 +L +R+ + G G+SG+VAQ ++ M+IG A+ D + T + P+ L + I Sbjct: 115 ALLLHKKRVYIYGKGSSGMVAQEMKFRFMRIGLICEAITDDDMIRMTAVLTDPECLAIGI 174 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S +G + + A G + +T + + Q + IS Sbjct: 175 SISGRSKIIIEALQTAKSQGAATVLLTANADREYRDTFDEVQLFAVKNQMEHGRLISPQF 234 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ D+L+ + D + + +++ Sbjct: 235 PVLVVLDILYADYMNHDAAERDRIWQRTYRALQR 268 >UniRef50_C6JFN2 Transcriptional regulator n=3 Tax=Clostridiales RepID=C6JFN2_9FIRM Length = 275 Score = 173 bits (439), Expect = 6e-42, Method: Composition-based stats. Identities = 54/281 (19%), Positives = 107/281 (38%), Gaps = 14/281 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + I Y ++ +AD+ + + + SS+ ++ VS++S+ +FAQK G+ Sbjct: 7 KIIPLIESYYHTFTPLERTIADFFIHNTEE-QDFSSKNISGLLYVSEASLSRFAQKCGFH 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ ++LA PE + + + + + Sbjct: 66 GYREFIYEYKQSLAPGPEENIPNFEVSE-------------FNTYQELLNKSNALLDKAQ 112 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + +L S R+ + G G+SGLVAQ + M+IG N AV D H + + Sbjct: 113 ITRITNLLVSKPRVYVYGRGSSGLVAQEMKLRFMRIGLNIEAVTDSHIMKVNSVILDENC 172 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++ IS +G ++ + + G L +T + Q L + E Sbjct: 173 LVIGISVSGQTDDIISSLKAAHQHGAYTLLMTARQDKSYQDFCDETLIFASMEHLEYGNI 232 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 IS ++ D+L+ +Q D ++ ++ + Sbjct: 233 ISPQFPILLVLDVLYAHYLQIDRSKKEALHEYTIQTLQPFL 273 >UniRef50_A9IGF4 Transcriptional regulator, RpiR family n=10 Tax=Proteobacteria RepID=A9IGF4_BORPD Length = 307 Score = 173 bits (438), Expect = 8e-42, Method: Composition-based stats. Identities = 63/280 (22%), Positives = 122/280 (43%), Gaps = 9/280 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + +IR R L+ +++K+AD +L A + QLA++AGVS +++ +FA+ +G Sbjct: 24 DIVYQIRSRRDALSATERKVADAILDDIAAAAGATVDQLADKAGVSIATISRFARSVGCD 83 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 LKL L++A A + +L + A + A L SE Sbjct: 84 DTRDLKLKLAQASAVGERFLDPSTPEE-------STFYARLYADIEATLRAHLPRFSEAL 136 Query: 122 LHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + ++R AR + G+G S +++Q +L+++G+ AA D L Sbjct: 137 FEQAAGIVREARMTYVFGMGGASAVLSQELQSRLVRLGYAVAAYSDAVLLRMVAATLDER 196 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ +S +G+ E+ + + G +++ +T + L A L E Sbjct: 197 DVVVVLSTSGLTPEILAGTRIVKQYGARIVTLTD-PASPLAGLADVVLPIHTAETDFIYK 255 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 S+ +A + D+L L E ER+R + + + Sbjct: 256 PSSSRYAMLLAIDILATELALARQEATQERLRRIKLALDE 295 >UniRef50_C4F999 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F999_9ACTN Length = 288 Score = 173 bits (438), Expect = 8e-42, Method: Composition-based stats. Identities = 57/286 (19%), Positives = 119/286 (41%), Gaps = 11/286 (3%) Query: 1 MNGLLRIRQRYQ------GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKF 54 M+ + + S++ + D++L + A ++S QLA + S++SV +F Sbjct: 1 MSTITELPSALPLITSSRQFLDSEQHIVDFILANTERAPQMTSAQLARASSTSEASVSRF 60 Query: 55 AQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATL 114 +KLG+K + + + +L+ LA++ V + D + + + ATL Sbjct: 61 CKKLGFKNYRSFQFSLARDLAAREGDERVTGEVTL---DDIEQSLANIKHAKQREIEATL 117 Query: 115 NVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATV 174 + + L V + R A ++ +G + VA + A K ++G A + + Sbjct: 118 DALDPDTLRRVVDLFRRAGLVMFAAVGNTNAVAIDAAIKFGQLGIRCVANTITESSTSLA 177 Query: 175 QASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE 234 DD+L+ +S +G + L G V+ I G L + A L T+ E Sbjct: 178 LTMGKDDVLVLVSNSGKSQRLERILRAAKHGGATVILICGNENAPLARLADIVLRTVNYE 237 Query: 235 QATNSASIS-ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + + + + ++ ++++ L+ A +RI E L++ Sbjct: 238 ALLTTVDFTFSKISATLIIEVIYSFLLSVMP-GARDRISGYEELIQ 282 >UniRef50_C8NE33 RpiR family phosphosugar-binding transcriptional regulator n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NE33_9LACT Length = 273 Score = 172 bits (437), Expect = 9e-42, Method: Composition-based stats. Identities = 54/278 (19%), Positives = 107/278 (38%), Gaps = 15/278 (5%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + I Y L +K +A Y L LS+Q+++N VS S+ +FAQK GY Sbjct: 9 KVVPIIESIYDTLTPIEKTIAQYFLEPIPEGVSLSAQEVSNRLFVSIPSLTRFAQKCGYN 68 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + + ++++ + + ++ +E + Sbjct: 69 GYRQFIYDYEKRSKEESTLHINSTKI--------------VLEDYAELLSKSFSLVNEAQ 114 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L +L SA+R+ + G G+SGL A ++ M++G A+ D+H +L D Sbjct: 115 LIRVCELLSSAKRVYIYGQGSSGLAALEMKFRFMRLGMICEAITDLHTMLMNRVLVDEDC 174 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++ I+ + + A + G K + IT L + + + Sbjct: 175 LVIGITVS-ANESVVKAVNIAKNQGAKTVLITSKKSEELSHECDELVLIAMKNALEQGTT 233 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 IS ++ D+L+ + D E ++ ++ Sbjct: 234 ISPQFPVLVVVDILYSYYKEIDKERKHSIFSNTLHAIQ 271 >UniRef50_C2LK66 Phosphosugar-binding transcriptional regulator n=4 Tax=Enterobacteriaceae RepID=C2LK66_PROMI Length = 283 Score = 172 bits (437), Expect = 9e-42, Method: Composition-based stats. Identities = 70/281 (24%), Positives = 131/281 (46%), Gaps = 2/281 (0%) Query: 1 MNGLLR-IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M+ L + + ++++LA YLL D +++ +LA +AGVS +SV++F++++G Sbjct: 1 MSTLTKKLENLRLQGKGTEQRLAHYLLENSDNIASMNAAELAQKAGVSSASVIRFSRQMG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 Y G+P K+ Q S S ++ + D + K T A+ ++ + Sbjct: 61 YGGYPEFKIDYLSEEKQQKSS-SDILYANLAKTDSTEQIIAKTGHLFTTAIQDSIALLDA 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + + SA+RI+L G+GAS +VA + KL+++ N D+HA LA S Sbjct: 120 ATIDLLAEKMISAKRIVLFGVGASAIVASDIFHKLIRVNKNTLFSADLHAQLAYSANLSA 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DDL +A++ G ++N + G +A+T F + + A++ L +EQ + Sbjct: 180 DDLAIAVTARGNTADINRMLKAAKQEGCITVALTRFGQDEATRLANYTLPYFYDEQHSQL 239 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 I+ Q + D+LF + A + + V + Sbjct: 240 GVITPQVLQMVAFDVLFFKYMTLAKGSAEKALLKGRQAVMQ 280 >UniRef50_C3RM54 Putative uncharacterized protein n=2 Tax=Bacteria RepID=C3RM54_9MOLU Length = 273 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 51/278 (18%), Positives = 120/278 (43%), Gaps = 16/278 (5%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I Y+ L +K +A+Y + Q + LSS+ ++ VS++S+ +FA+KLG+ Sbjct: 7 SVIPIIESAYEELTNVEKNIANYFIDQVED-EDLSSKAVSQRLYVSEASLSRFAKKLGFS 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ A ++ S L L+ ++++ + T ++ ++ Sbjct: 66 GYRQFLFAYQDSHQSSRH---------------LDLLTKQVLNSYQKVLEKTYSLIDNDQ 110 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + ML R+ + GIG+S +VA+ F + M++G + + + H++ + + + Sbjct: 111 MVRIAKMLDEYNRVYIYGIGSSSVVAREFKLRFMRLGLDVDYLAESHSIRMNITRVNQES 170 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++ IS +G E+ E G K + ++ + + + S Sbjct: 171 LVIGISVSGKTEEVIEGLREAKEKGAKTIMLSAARVYEYRSYYDELILIGGLKNLAISDK 230 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 IS ++ D+L+ + + + E+++ + + Sbjct: 231 ISPQIPALIVVDILYSHYLNYNNDNKKEKLQMTLEHIN 268 >UniRef50_A5IPI4 Transcriptional regulator, RpiR family n=54 Tax=Staphylococcus RepID=A5IPI4_STAA9 Length = 266 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 58/261 (22%), Positives = 116/261 (44%), Gaps = 14/261 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M R+++ ++DK++ +Y+ + + LA+ G S +++ +F+ KL Y Sbjct: 1 MKFENRVQRYQHLFTKTDKRIVNYIRQNGYSDAFSTINSLAHAIGTSPATMTRFSHKLDY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + F LK + + + S + +++ K + + T + Sbjct: 61 ENFQDLKFNIQQEMTETVIENSP--------------IIQRIHKYHQQIIQQTGEFIDND 106 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + L+S+R I+ G+G+SGL A F ++++++G D H + + S Sbjct: 107 IIQTFIDKLQSSRHILFAGLGSSGLSATEFYYRMIRMGLKGNVTTDSHLMKISASLLSHS 166 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ +A+S +G EL AA+ G V+AIT F + L A L T + + T+ Sbjct: 167 DMFIAMSNSGNTSELISAAEVAKSHGAYVVAITNFEGSKLTDCADLVLLTTDQSRNTDHQ 226 Query: 241 SISACHAQGMLTDLLFIALIQ 261 I+ A L D++ L++ Sbjct: 227 FINTQIATLFLIDIVSYHLLE 247 >UniRef50_B0NFU9 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B0NFU9_EUBSP Length = 285 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 62/280 (22%), Positives = 127/280 (45%), Gaps = 14/280 (5%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L I+++Y + +++K+AD++L P A + +LA ++GVS ++VV+ +GY G Sbjct: 14 VLEVIKEQYDYIFSAERKVADFVLQNPQKAVDSNVSELAKQSGVSDATVVRMCHHIGYTG 73 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + +++L+ L + S R EKL +E M A + + + Sbjct: 74 YYQFRISLARDLGKKQYGSSALAE--------SRDAVEKLFQEYAQTMLAIGSRIDADVM 125 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 CV +L++ + + +G + +AQ ++L ++G + + V + DDL Sbjct: 126 WNCVNLLKTCKEAHIMAVGNTCPLAQYMGFRLGRLGIKSTYNVAAEYFMNHVNLADQDDL 185 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L+AIS +G R++ + G K +AIT F + + A + L + +E+ + Sbjct: 186 LIAISQSGTSRQVIQGLELGKEKGLKSIAITAFAQSPVSNLADYVLLSAGKEEPFSFYKG 245 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 A + + D L + E I+ ++A +++ Sbjct: 246 YAHMNETAVIDALL------NFVTNEELIKTTQADKPEMI 279 >UniRef50_C8STB5 Transcriptional regulator, RpiR family n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8STB5_9RHIZ Length = 275 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 57/277 (20%), Positives = 117/277 (42%), Gaps = 10/277 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + +R + + ++A+ +L QPD S +LA + S++SV++F + G+ G Sbjct: 5 LIASLRAAAGDMTPALARVAETVLAQPDATLRQSITELAEASASSEASVMRFCRDQGFAG 64 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F KLAL++ LA+ + + + ++L++ ++ T + E + Sbjct: 65 FQDFKLALAKELATDERARDIGL---------PTDDIQRLVETAIISLRETEQLIVREDI 115 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + L +A I GI AS + AQ A+K+ +IG + A+ D H + + + Sbjct: 116 AKAARQLLAATAIDCFGIAASAITAQYLAYKMTRIGKLSRALGDAHLAVMAAGTTQKGTV 175 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + IS +G + A+ G V+ I+ + + L L E + Sbjct: 176 QVVISSSGSTIDAVRIAELARSQGAFVIGISNRSKSPLVAACDLALIASWPETPLTGGAF 235 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + +Q ++ D L +++QD + + +V Sbjct: 236 PSKISQLLIVDALAAEMMRQDPAR-LALLGRTAEVVS 271 >UniRef50_B1Y2D5 Glucokinase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y2D5_LEPCP Length = 616 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 63/271 (23%), Positives = 113/271 (41%), Gaps = 5/271 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +R L+ S++ +A LL P S ++A+ GVS +V++F + +G+KG Sbjct: 337 LLDDVRAALPRLSTSERLVAGDLLSAPRAWMSDSIARIADRCGVSTPTVMRFCRTMGFKG 396 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 KL L L+ + H +R DP ++ + +A+ + + Sbjct: 397 LADFKLRLGAGLSGS----TKVAHRPVRAADPTAERMATILNNSISALIELRDRLHPQAF 452 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V +L +ARRI + G+GA+ L A+ K ++G A D T PDD+ Sbjct: 453 EQAVKLLANARRIEVYGVGAAALAAEEAQHKFGRLGLQVVARTDSQLQNVTAAFLGPDDV 512 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 LL +S +G +N A R G +V+ + + L + + L E + Sbjct: 513 LLVLSNSGAVDPVNEAVMRARRSGTRVIGM-CPQRSDLARLSDVILPVDHPEDLQALVPM 571 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRH 273 + Q ++ D+L L Q + + Sbjct: 572 VSRLMQTVIVDVLVTDLALQRRDHINAALVR 602 >UniRef50_C3WAG5 Transcriptional regulator n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WAG5_FUSMR Length = 283 Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 49/277 (17%), Positives = 123/277 (44%), Gaps = 3/277 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L + Q + +++K+A ++L ++ + ++ + G S +S+ +F +K+G++ F Sbjct: 7 LFLLDQLLPSFSPAEQKIALFILENTFAVIDMTIEDMSEKIGTSVASISRFTKKIGFENF 66 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 LKL +++ + + I + + + + K N+A + ++ + +K+ Sbjct: 67 YLLKLGIAKEFVNSS---NKTISLNVNKNSNATDIYTNVAKTNSAILEESIEYFNTDKME 123 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 E ++ +A I L +GASG++A+ +K +++G + + D H+ L D+ Sbjct: 124 EISEIILNANHIYLFAMGASGILAKESWYKFIRLGLKCSMIEDFHSQLLQASILDDTDVA 183 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 L S++G+ +++ + + + IT + Q CL+ + S Sbjct: 184 LIFSHSGINKDVLTLLEIINETPAYSIGITNYARTPFSQSVDICLFFSENSTPMDKVGFS 243 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + Q ++ + L+ L + + + + + KK Sbjct: 244 SRIPQLIIIESLYRILSLKLGKKSKICQERYKQIFKK 280 >UniRef50_C9S176 Transcriptional regulator, RpiR family n=2 Tax=Geobacillus RepID=C9S176_GEOSY Length = 244 Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 57/265 (21%), Positives = 105/265 (39%), Gaps = 23/265 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M R+R L +D ++ DY++ + + Q++A +++V+FA+KLGY Sbjct: 1 MRFDERVRLYADRLNDTDDQIVDYIMEHREEIADIPIQKMAEALYTVPNTIVRFAKKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGF LK AL+ ++ + + + T + E Sbjct: 61 KGFAELKAALALEQRAEAAALAGGT-----------------------VIEKTKELLDER 97 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + E V L A+ + G+G S + A L +G A H +L Sbjct: 98 LIEEAVGKLHEAKHVFFYGVGDSAYFCEMMAKHLRCVGKRADFFVQRHDMLYNADRCGEK 157 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D++ IS +G +++ A + G V+++T F PN+L A LY A +Q N Sbjct: 158 DVVFVISASGETKQVLEAVAAAKQNGAFVISLTHFCPNSLADLADFRLYCWAPKQFLNKY 217 Query: 241 SISACHAQGMLTDLLFIALIQQDLE 265 ++ + ++ L + + Sbjct: 218 DVTDRTSLYLVLRALSERYWKTYGK 242 >UniRef50_A5VV40 Transcriptional regulator, RpiR family n=37 Tax=Rhizobiales RepID=A5VV40_BRUO2 Length = 305 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 57/281 (20%), Positives = 111/281 (39%), Gaps = 5/281 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + R+ Q ++SD++LA +L P A + ++A AGVS+ +V +F + LG Sbjct: 18 DIITRLHVVAQEGSKSDRRLAGLVLADPHYASKAAISEIAARAGVSEPTVTRFCRALGCD 77 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G K L++ALA + + I + + + + AA+ + Sbjct: 78 GVRDFKFFLAQALAIGGQYLTAEIPARDVRE---SRIATAVTDAAIAAIQRAGDGVDMGV 134 Query: 122 LHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + L + ++ G G S ++A +L ++G A D ++ + Sbjct: 135 LMKVAERLAAGGPVLCLGSGGMSSMLATEMENRLFRLGIPVNAQVDGQLQRMYAAVTTHE 194 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +LA S +G R + A + G + +AIT + L + A + E Sbjct: 195 TTVLAFSVSGFARSVVEAVLVARQYGAETVAITA-AGSDLARAADMLIPFQPNEDGNIYK 253 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 SA + + D++ A + E +R + + L Sbjct: 254 PTSARYGLLAILDMIATAAAEARGPKVLESLRRIKHSLNTL 294 >UniRef50_A4E6N7 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6N7_9ACTN Length = 301 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 57/266 (21%), Positives = 120/266 (45%), Gaps = 6/266 (2%) Query: 15 AQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEAL 74 ++S++++ DY+L A L++ QL+ A S+++V +F +KLG+ F + + +L+ L Sbjct: 35 SESEQRIVDYILEHQSEAPRLTAAQLSRAAATSEATVSRFCRKLGFGSFRSFQFSLARDL 94 Query: 75 ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARR 134 SQ D + + ++ + + AT++ + L V L+ A Sbjct: 95 ESQRN----EGLTDEVSLDNMEQSLKNILAAKVSELNATIDGIDHDTLAAVVHALKHAGV 150 Query: 135 IILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRE 194 I +G + VA + +K ++G A + P D+++ IS +G R Sbjct: 151 IEFAAVGNTNAVALDATFKFSQLGLRCMASTISETSIGFALTLRPGDVIVLISNSGKSRR 210 Query: 195 LNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS-ACHAQGMLTD 253 LN A G V+ I+ + + L + A + T+ E + + + + M+ + Sbjct: 211 LNRMAKAARNCGATVVVISSDSKSPLARLADYTFNTVNHEALLTTGDFAFSKISATMIIE 270 Query: 254 LLFIALIQQDLELAPERIRHSEALVK 279 +++ L+ + + A E I + E L++ Sbjct: 271 VIYNFLLPEIKD-AREHISYYEELIQ 295 >UniRef50_C3RHU4 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RHU4_9MOLU Length = 285 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 57/281 (20%), Positives = 130/281 (46%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L ++ + +G + +K +A+Y++ + ++ +LA S +++ +F +KLG Sbjct: 1 MSLLSKL-EYKKGFSDIEKGIANYIIDHKEEVANMRLVELAEATFTSTATISRFCKKLGE 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 K + + K+ + ++ + ++ V + + +D ++ V +L + + AT + + Sbjct: 60 KNYNSFKINFASSVLTSYQT-DVDYNRPFKENDSIQEVTNQLGELYKDTIEATKALLDYD 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L++ + L I + +GAS L F +++ I + + + Sbjct: 119 VLNQVIEKLLKTSVIDIFAVGASYLSGLLFEHRMISIDHFVNFKSSPNDQDKRSLFVNKN 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN-S 239 + + ISY+G E+ D ++ G ++AIT + L++RA++CL ++E + Sbjct: 179 TVAIVISYSGESHEIKTIVDRIVDNKGTIIAITSINDSYLRKRANYCLTMCSKENIVSKI 238 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + S+ + L DL+F L Q+D R + E +K Sbjct: 239 ETYSSKLSSDYLMDLIFSILFQKDYYPNLIRKINCEQKYEK 279 >UniRef50_A4CAD1 Transcriptional regulator n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CAD1_9GAMM Length = 283 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 64/281 (22%), Positives = 123/281 (43%), Gaps = 11/281 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + RI++R L QS++ +A +L A S +LA A VS +S+ + A+ L Sbjct: 1 MDIVSRIKERLGHLRQSEQLVAQLILENLQFAASASIGELAQRANVSHASITRLAKALDC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +KL L+++LA I ++ R + K A + + ++ Sbjct: 61 DNVRDMKLQLAQSLA--------VGERFISENNSQREDIPAIYKAIHAILDLNAGLIAQT 112 Query: 121 KLHECVTMLRSARRIILTGI-GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++ E + S+R ++ G+ G S +VAQ +L ++ + A D + T + Sbjct: 113 QVEEAARCIASSRHTLIFGVGGGSSVVAQECHNRLFRLDVLSNAYSDPVMMRMTAASVDV 172 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+++ +S TG+ ++L AA G KV+AI +AL A+ L E Sbjct: 173 CDVVVVLSLTGLPQDLIDAASIAKDYGAKVIAIC--PDSALADVATFHLPIKTNESDYIF 230 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +A +A D+L + + + E++R + + + Sbjct: 231 TPSTARYAMLAAVDVLASEVAILTQKKSREKLRRIKHELDE 271 >UniRef50_C3RKL9 Sugar isomerase n=3 Tax=Bacteria RepID=C3RKL9_9MOLU Length = 294 Score = 171 bits (433), Expect = 3e-41, Method: Composition-based stats. Identities = 56/280 (20%), Positives = 106/280 (37%), Gaps = 3/280 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + ++ + S+ + DY+L Q +++S+ +A S +V+ A+KLGY Sbjct: 1 MLIIHKLEHT--HFSSSEAIIIDYILEQGLKIKNMSANSIAKATFTSAPLLVRIAKKLGY 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ A K L + V D + + + + A+ T+++ + + Sbjct: 59 SGWNAFKEDFIAELEYLFKEQKVDASIPFVVSDDIMTISNNIGQLQIDAIQDTMSMLNHD 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + LR+A+ + L G+ + L+A+ F KL I N R S Sbjct: 119 DLQTALRYLRNAKELDLYGVSNNLLLAEGFRSKLFYIHRNVNICRLPGNPKVQAAMSDET 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-NS 239 + ISY+G + A + + ++AIT N L + A L + E Sbjct: 179 HCAILISYSGETEFIIEVAKVLKKKETPIIAITCIANNRLSKIADVTLRISSREMLHTKI 238 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + + L D L+ + D + + V Sbjct: 239 GDFATTTSIKYLLDTLYAGIFSFDYQKNLDYKIQIAKAVD 278 >UniRef50_C2EDG2 RpiR family transcriptional regulator n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2EDG2_9LACO Length = 274 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 60/282 (21%), Positives = 120/282 (42%), Gaps = 14/282 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + +I + L+ D+K+A +L P + +LA EAGVS +S+ +F + LG Sbjct: 1 MTIVDKIYDKQPELSTCDQKIAHVILKNPIEVVDKTISELAEEAGVSLASISRFCKTLGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+ L+ + ++ + E + + + T + S+E Sbjct: 61 AGFHQLKIELAR-------VSEENTTQAVEKENFGGQLSEFVKDKEIE-LEKTFSQISQE 112 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + L AR I + G + A++ +K +IG A + LA + Sbjct: 113 TCEKICGKLLHARAIQVIAEGNTYANAEDAVYKFSQIGLFAFSSASWETALAQTMNLQKE 172 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+LL S +G + L + DE + G V+++T + + Q++ T+A + S Sbjct: 173 DVLLVFSNSGEAKSLLVQIDEAKKRGITVISLTNHENSPIAQKSDLHWRTVARPKVLMSE 232 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 + A + +FI +++++ +R+ + +L+ Sbjct: 233 YYYSRLALVSAIEAMFILILKKEP----KRLERIK--FHELL 268 >UniRef50_C0ZHI7 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZHI7_BREBN Length = 292 Score = 170 bits (431), Expect = 5e-41, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 116/282 (41%), Gaps = 7/282 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + RIR+ Y L K A Y+L +P T ++ + +G S++++++ + L Y Sbjct: 5 SVQERIRKHYPELTNQQKLAAKYILAEPKTVALQPAKVVGALSGTSETTIIRLSYALAYS 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDD--PLRLVGEKLIKENTAAMYATLNVNSE 119 G+ L+ + +L + + + + + ++++ A + TL + Sbjct: 65 GYSELQSEIRSSLLEKVPKADAIHSFRTAAVEMKGKQDLISYNMEQDVAYIRQTLGELQK 124 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASS 178 L + V+ + +A+ I++ G +S A A+ L + NA + + + Sbjct: 125 NHLLQAVSSIMAAKHILVVGFRSSYAPAHWLAFTLNVVRGNAHLYNGPVDDVNYLLTQIN 184 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D L++A+S+ E L A G K++ IT + + A L A Sbjct: 185 QDWLVIALSFPRYTSETILFAKAAKERGAKIIGITDDELSPIGPVADQILKVSAPAP--- 241 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ A + ++L ++Q D E +R++ E ++ Sbjct: 242 -TALKGMTAIFSMLNILISGVVQADGEQVQQRLKEYEETSRQ 282 >UniRef50_Q0STT6 Transcriptional regulator, RpiR family n=14 Tax=Clostridium RepID=Q0STT6_CLOPS Length = 291 Score = 170 bits (431), Expect = 5e-41, Method: Composition-based stats. Identities = 59/279 (21%), Positives = 123/279 (44%), Gaps = 7/279 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I+ ++ L++ K +A+Y+L D A +++ +L N GVS+S+VV+FA +LG+ Sbjct: 5 DLMRLIQVKFPKLSKGQKLIAEYILKNYDKAAFMTAAKLGNNVGVSESTVVRFATELGFS 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L+ AL E + ++ S + ++K + + ATL + + Sbjct: 65 GYPKLQKALQELIKNKLTSVQRL--ELSNDFISEENALKGVLKADIENIRATLEKINHKT 122 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASSPD 180 E V + A+RI + G+ +S +A+ + L I N + + + + Sbjct: 123 FDEVVNEIFKAKRIYIIGLRSSTALAEFLGFYLNLILDNVRVISNGISDTFEQMLNLGEG 182 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++ I + + A + K+++IT + L ++ H L + + Sbjct: 183 DLVIGIGFPRYALKTIDALEFAKTRNAKIVSITDSLISPLASQSDHTLIAQSNMASF--- 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + + A + + L IA+ ++ E E + K Sbjct: 240 -VDSLVAPLSVINALIIAVGIREKEKITSTFSELEKIWK 277 >UniRef50_Q4L9T6 Similar to transcriptional regulator n=2 Tax=Staphylococcus RepID=Q4L9T6_STAHJ Length = 268 Score = 170 bits (430), Expect = 7e-41, Method: Composition-based stats. Identities = 64/261 (24%), Positives = 113/261 (43%), Gaps = 14/261 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M RI++ L + DKK+ +Y+ + LA G S +++ +F+ KL Y Sbjct: 1 MKFENRIQRSRHVLTKMDKKIIEYIQTHELDENFSTINSLAYAIGTSPATITRFSGKLNY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F +K L + + + + + + + + + T SEE Sbjct: 61 ANFQDMKFNLQHEKSEKVVENAP--------------LVQLIHRYHQNIIQQTGEFISEE 106 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 K+ L++ R++ G+G+SGL A F ++ M++G + D H + + S Sbjct: 107 KIKRLAHNLKTCRQVNFAGLGSSGLTASEFYYRTMRMGIKGSVSTDAHQMKISASLLSSR 166 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ +AIS +G EL AA G V+ IT F +AL + A L T A+ +S Sbjct: 167 DMFVAISNSGETLELIEAAKIARNQGAYVVVITNFEGSALTKNADLVLITTAQSSNNDSK 226 Query: 241 SISACHAQGMLTDLLFIALIQ 261 I++ A L D++ L+ Sbjct: 227 FINSQIATLFLLDIVSYLLLN 247 >UniRef50_UPI0001BC57B3 oxygen-independent coproporphyrinogen III oxidase n=2 Tax=Fusobacterium RepID=UPI0001BC57B3 Length = 538 Score = 169 bits (429), Expect = 8e-41, Method: Composition-based stats. Identities = 67/254 (26%), Positives = 137/254 (53%), Gaps = 3/254 (1%) Query: 28 QPDTARHLSSQQL-ANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQP-ESPSVPI 85 + +++ A +++V+F++KLG+KGFP KL+LS+ + ++ ES + Sbjct: 281 NKRDVLNSIEKEMKAENIYQGGTNIVRFSKKLGFKGFPDFKLSLSQDIGNRKAESHVNIM 340 Query: 86 HNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGL 145 H +I+ D ++G+K+ ENT A+ T + ++L + V M+ AR+I+L G+G SG+ Sbjct: 341 HEEIKPTDTFEIIGKKVATENTMAVNNTYEITDFKELEKAVKMISEARKIMLAGVGFSGI 400 Query: 146 VAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRV 205 VA++F +KL+++G D H L+ + + +D+L IS++G E+ A Sbjct: 401 VAKDFHFKLLELGKQTLFENDTHMQLSYLATMNENDVLFVISHSGKTLEVFNLAKAAKNR 460 Query: 206 GGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLE 265 K++ +T + +++ L T+ + + ++S +Q + D+++I L+ ++ E Sbjct: 461 KVKIITLTSVVQSPIRELGDIKLSTVEMKSDFRATALSPRISQLTVIDMIYIKLMLEN-E 519 Query: 266 LAPERIRHSEALVK 279 + I ++ LVK Sbjct: 520 DLQDYIFNAIELVK 533 >UniRef50_C3RR03 Sugar isomerase n=2 Tax=Bacteria RepID=C3RR03_9MOLU Length = 298 Score = 169 bits (429), Expect = 8e-41, Method: Composition-based stats. Identities = 57/278 (20%), Positives = 114/278 (41%), Gaps = 4/278 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M +I + L+QS + +ADYLL + + ++ ++LA S ++++ A+KLGY Sbjct: 1 MLIEQKIERA--RLSQSQQLIADYLLEKRSNIKDMTIKELAVATYTSTGTIIRLAKKLGY 58 Query: 61 KGFPALKLA-LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ K L E ++ + D ++ + K+ + TL + Sbjct: 59 HGYEDFKADFLKEVYYLDTHFKNIDPNFPFVKTDNIQKIASKVTLLAQETLSDTLALLEH 118 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L + + +++ A +I L I S L+ Q F +++IG N L Sbjct: 119 DNLQKALRIMQKANQIHLAAISYSLLLGQIFKLDMLRIGKNVNICNTNGEELFLPAVIKN 178 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +D ++ ISY+G L A + ++AIT N L++ A L+ E+ + Sbjct: 179 NDCIIIISYSGEIHNLCSLARTLKGRSVPIIAITSLGDNELKKYADVVLHISTREKLYSK 238 Query: 240 ASISACH-AQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + + + ++ D+L+ + R Sbjct: 239 IAGYSNENSIKLILDILYSCYFNLMYDDNLARRIAISK 276 >UniRef50_A8F424 Transcriptional regulator, RpiR family n=1 Tax=Thermotoga lettingae TMO RepID=A8F424_THELT Length = 282 Score = 169 bits (429), Expect = 9e-41, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 115/279 (41%), Gaps = 9/279 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + +++ +++S ++A +++ P +++ +LA S S+VV+F++KLG+ Sbjct: 4 SVFQKMKDMMPSMSRSQIRIAQFIIENPSKVLNMNILELARSCESSPSTVVEFSKKLGFS 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + ++AL++ +A D LR + + + + ++ + S+E Sbjct: 64 GYKSFQIALAQEIALFETLKPDS--------DRLRRICRDFLGFVFSELKQSVELISDEV 115 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L ++ + + + G + ++ KL + GF + + Sbjct: 116 LTRASDIILKSNVVEIFAYGFDSIAGKDLFLKLKEFGFQVNFFSNPFLQSISASHLGNRG 175 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +AIS + +L A + G V+AI + + + L + + Sbjct: 176 CAVAISSSHSSTDLLDAISFSKKSGASVIAIAS-PSSKIAEVCDILLPAYVRTEILSEGG 234 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + Q ++ DLL + + + D + E+ +H E ++ + Sbjct: 235 FLTKYLQIVIVDLLILKMFEIDKDRLYEKYKHFETILSQ 273 >UniRef50_B2IRS9 Phosphosugar-binding transcriptional regulator, putative n=36 Tax=Streptococcus RepID=B2IRS9_STRPS Length = 283 Score = 169 bits (428), Expect = 9e-41, Method: Composition-based stats. Identities = 55/280 (19%), Positives = 113/280 (40%), Gaps = 13/280 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + I ++ + ++++A Y L LSSQQ+ + +SQ+++ +FA+K G+ Sbjct: 5 DIATVIDSHFEEMTDLEQEIARYFLQAETIQDDLSSQQVTQKLHISQAALTRFAKKCGFT 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ +Q S + +++++ + T ++ E + Sbjct: 65 GYREFIFQYQHEAENQANQVSKHSP-----------LTKRVLRSYSNMREQTQDLIDEVQ 113 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L ++ A R+ G G+SGLVA+ + M++G A+ D T + Sbjct: 114 LERIAQLIEDAERVYFFGTGSSGLVAREMKLRFMRLGVVCEALTDQDGFAWTTSIMDENC 173 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L+L S +G + + + +G K + + Q + + Q + Sbjct: 174 LVLGFSLSGSTPSILDSLLDAKEMGAKTVLFSSVPNKD-SQAYTETVLVATHSQPSYIQR 232 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ISA DL++ ++ + E + E+I +S KKL Sbjct: 233 ISAQLPMLFFIDLIYAYFLEINRE-SKEKIFNSYWENKKL 271 >UniRef50_C7TGD6 Transcriptional regulator, RpiR family n=3 Tax=Lactobacillus rhamnosus RepID=C7TGD6_LACRL Length = 277 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 64/281 (22%), Positives = 137/281 (48%), Gaps = 8/281 (2%) Query: 1 MN-GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 MN RI Q Y L ++ +++ADY + S + L+++ GVS +++ +FA++LG Sbjct: 1 MNTFDSRIAQVYSALGEASRQVADYFRHNYAKVANSSLRNLSDKIGVSTATISRFARQLG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 + F LKLAL + + + + + +D K + N AA+ TL+ ++ Sbjct: 61 FASFDQLKLALLKEIDNTT-------NGDVETNDNSLASARKTVNANIAALEGTLSFLTQ 113 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 +++ V +L A ++ L G+G+S ++A+ +++ A D H L + + Sbjct: 114 DQIDHSVNLLLDANKVALFGLGSSNVIAKAAYHTFLRLPLTLIADNDYHMQLMSANKLTE 173 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+ + IS+TG ++ D + ++A+T + + L +R S ++I+E+ S Sbjct: 174 HDVAIVISHTGNDTDILALVDLLSAHQVPIIAVTSYATSPLAKRVSDVFFSISEDTRYRS 233 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ + +Q + D+L+ L+++ + + I V + Sbjct: 234 DALISMTSQLAIFDVLYTELVRRMGLQSEKTIALVHQAVAQ 274 >UniRef50_A6M2X4 Transcriptional regulator, RpiR family n=4 Tax=Clostridiales RepID=A6M2X4_CLOB8 Length = 286 Score = 168 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 65/282 (23%), Positives = 126/282 (44%), Gaps = 3/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I+ L Q++ LA Y++ + LS QQL+ + VS+S++ +F +K+G Sbjct: 1 MTIENMIKCC-DKLTQTENILAQYIIKNKNEISTLSIQQLSEKTFVSKSAIHRFCKKIGV 59 Query: 61 KGFPALKLALSEALASQPES-PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 GF LK+ +++ +A + + + ++ D ++ +KLIK + T Sbjct: 60 DGFNELKVKVAQDIAEESKIENDIDVNFPFLEGDTQGVIAQKLIKLYETTIRDTYKYIDV 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 EKL+ CV++L A I + + VA+NF K+ IG + + T AS Sbjct: 120 EKLNTCVSILHKADVIDIYTHAHNSNVAENFMDKMRSIGRMVNCTKSFYDQRCTATASKK 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ-ATN 238 + L +SY+G L ++ + + G + + I +++ + H LY E Sbjct: 180 NHAALLLSYSGKSNFLKPISEVLYKRGIETIWIGRVGSSSVPEYIKHRLYISDRENFKNR 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + S+ A + DL++ + ++D + I+ +V Sbjct: 240 ISQFSSHIAMQYMLDLIYSCIFKRDYNDNIKYIKEIANIVDN 281 >UniRef50_B9B6B2 Transcriptional regulator, RpiR family n=3 Tax=Burkholderia multivorans RepID=B9B6B2_9BURK Length = 311 Score = 168 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 64/263 (24%), Positives = 110/263 (41%), Gaps = 3/263 (1%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I+ R LA S+ K+ + LL P ++ Q+A AGVS +V++ A+ LG+ GF L Sbjct: 40 IQARSGDLAASEAKVVELLLSDPLFVGASTTAQVAARAGVSPPTVIRAARALGFTGFTEL 99 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 K+ ++ A + + + D V E I+ A+ A L + V Sbjct: 100 KIEIARARGTARFFAPPEV---LTADASSAAVLETSIRTGVDALSALSGAIEIAALDKAV 156 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 ++ AR++ G G S VA + ++L +G + D + + + P D+++A+ Sbjct: 157 ASIQQARQVFAFGAGPSATVAADAVFRLRAVGVTTVGIPDYLSAMIAARLLGPGDVVIAV 216 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S TG AD G ++A+T L A L A+ + Sbjct: 217 SSTGRTSSTLAVADAASSAGATLVAVTNQYGTPLANLADIALVVGGAPLPAQMAAAGSRL 276 Query: 247 AQGMLTDLLFIALIQQDLELAPE 269 AQ ++ D L AL +D + Sbjct: 277 AQLVVIDALVAALALRDPARSRR 299 >UniRef50_Q9K8R3 BH2940 protein n=4 Tax=Bacillus RepID=Q9K8R3_BACHD Length = 284 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 64/280 (22%), Positives = 120/280 (42%), Gaps = 5/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + RI + +++S KK+A+YL+ PDTA L++ +LA A V +++V++FA LGY+ Sbjct: 5 DVYKRIMDLQEKMSKSQKKIANYLIQHPDTAPFLTASKLAKYAAVGEATVIRFAVFLGYE 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L+ L EAL + S V +D E+++ ++ A + ATL E+ Sbjct: 65 GYPDLQRHLQEALQKKMTSAEVFARTT-DREDRPSHAIEEILTDDMANLRATLQQIELEE 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V + A+RI + ++ + Q + L + N V + + + DD Sbjct: 124 FEQAVNSIIEAKRIYVIAYRSAASLGQFLTFYLDLVLQNTELVEQADGVSEHLLDITEDD 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++ + + + + G K + IT + L L E + Sbjct: 184 LVIGFGFARYTKRTVDVLKYVKQRGAKTIVITDHALSPLVPYGDRVLLAATEINSF---- 239 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 I + A + A+ + + E R++ E L Sbjct: 240 IDSFAAPHSIVSAFITAVTRSEHEKVQNRLQQLEELWASF 279 >UniRef50_A6M3B1 Transcriptional regulator, RpiR family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M3B1_CLOB8 Length = 247 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 47/263 (17%), Positives = 103/263 (39%), Gaps = 17/263 (6%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I + + L +++ L Y+L + ++ Q L+ E S +++V+F KL Y Sbjct: 1 MTIFDTIEKNRKFLNKNENYLLKYILENIEKVSNMRIQDLSKETFTSTATIVRFCNKLSY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ K L ++ + + + + + T ++ ++ Sbjct: 61 SGYSEFKANLRNSIDRENNHKKISDNMFL-----------------FDDIAKTKDLINDS 103 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + E ++++ A +I G G+S V + + K + N D + +T Sbjct: 104 LIDEVISIIHDAEKIDFYGEGSSKDVCIDISRKFHLVEKNCRYFNDSSIMYSTASDLDSK 163 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 L++AIS +G ++ A + G K++ +T N L + CL+ + E NS Sbjct: 164 TLIIAISMSGETSQVIKAVNIAKTRGCKIICVTSVGYNTLANLSDKCLFIFSSEYEINSI 223 Query: 241 SISACHAQGMLTDLLFIALIQQD 263 + + + +F + + Sbjct: 224 KFKSRVTANAIMEYVFFRYLDKY 246 >UniRef50_C3WA33 Transcriptional regulator n=3 Tax=Fusobacterium RepID=C3WA33_FUSMR Length = 283 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 57/281 (20%), Positives = 109/281 (38%), Gaps = 8/281 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L + Y ++S KK+A+Y+ +S +LA E S +++ +F++ LG+K Sbjct: 4 KILRYLDDNYNSFSKSFKKIAEYIKYNQSIISFISINELAKETETSPATITRFSKNLGFK 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P + + + Q + N I D V +++I N + E+ Sbjct: 64 GYPDFQKIFQKEVEQQTSYM-KGLKNSITERDDSSSVLQEMINTNIELLQEMDVFEIEKS 122 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAA-VRDMHALLATVQASSPD 180 L + V + S+R++ + G S +A + L + + + + PD Sbjct: 123 LDQAVDWINSSRKLYILGARGSYALAYYLYFMLKEFREGVELMISGASDFTDKLLYTQPD 182 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DLLL IS+ + G KV+ IT + L + L T E+A Sbjct: 183 DLLLTISFHPYTNFTYQVTEFFKEHGNKVITITDKKDSTLGNISDLVLTTKNGEKAY--- 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++ + L + L D E E++ + + + Sbjct: 240 ---TFVPGTVIINALLVKLGMVDKENTVEKLDKLKEITDRF 277 >UniRef50_UPI000196B4B9 hypothetical protein CATMIT_00397 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B4B9 Length = 290 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 59/270 (21%), Positives = 117/270 (43%), Gaps = 2/270 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + I + + + S++++ADY+L + R SS+ +A++ ++ S + +F QKLG+ G Sbjct: 1 MIEDILKEKKNMTSSEERIADYMLEKKTLLRKQSSRSIASQLFINPSMITRFCQKLGFHG 60 Query: 63 FPALKLA-LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + L E ++ ++ ++ D ++ K+ + + TL + S + Sbjct: 61 YTDFLEEYLKEIEYTESHFQNLDPNHPFDNQDKNTVIANKIGQLYHEIVDDTLKLISHDA 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + L + I + G G VA+ F K++KIG N M+ L + Sbjct: 121 LQNAINCLNKSDIIYVYSAGVQGDVAETFKDKMLKIGKNVVLETKMNELYYRASYCPLNC 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA-TNSA 240 + ISY+G ++ +LAIT + N L Q A + L E+ N Sbjct: 181 TFIIISYSGEIETELRGVKKLKERHIPLLAITSYGDNTLSQYADYILNVSTREKLKDNLG 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPER 270 + + ++ D+L++++ D ER Sbjct: 241 DFAMNISTMLILDILYVSIFNTDYSTHVER 270 >UniRef50_C4Z5R8 N-acylmannosamine kinase n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z5R8_EUBE2 Length = 316 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 55/282 (19%), Positives = 115/282 (40%), Gaps = 8/282 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L IR R GL++ K++A+Y+L + L++ +L GVS+S+ V+F LG+ Sbjct: 9 DVLSLIRVRMSGLSKGHKRIAEYILANYEKCAFLTAAKLGEVVGVSESTAVRFPAALGFS 68 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P + AL + L + S + + +V ++ + + TL Sbjct: 69 GYPEFQKALEDILQEKIHSFDRI--DVLNSHMTTNMVVNNVMSMDARKIEHTLKSFDTTS 126 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAV--RDMHALLATVQASSP 179 V + +A + + G + +A+ F + L + N V + + L + Sbjct: 127 FDMAVEDIMAAESVYIIGARSCEPLAEFFGYYLRMVKKNVQVVKTGNTNELFEQMMYIGE 186 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+ + IS+ A + +V++IT + + +S L+ ++ + Sbjct: 187 GDVAIGISFPRYSMRTLKAMEFANNRQARVISITDSVHSPMNMYSSCNLFARSDMASI-- 244 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + A L + L +++ ++ E E I A V Sbjct: 245 --VDSLVAPMSLINALIVSICLKNSEQVVENIEKINAFVDNF 284 >UniRef50_UPI000169311A hypothetical protein Plarl_08670 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI000169311A Length = 267 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 63/260 (24%), Positives = 123/260 (47%), Gaps = 17/260 (6%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L I+ +Y ++ +KK+AD+LL P A +++A++ GVS +S+ +F++K+ + Sbjct: 7 SLLKTIQSKYSSFSEKEKKIADFLLSSPAAAAQCHIKEIADQTGVSVASITRFSKKVLCQ 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F LKL L+ D + +L + ++ E Sbjct: 67 SFVELKLKLARE----------------SYDHTKDELDVELKNQYKEMFNDIESLIENEP 110 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L E +++++ A+R+ + G+G+SGL AQ F ++L ++GF + AV D H ++ DD Sbjct: 111 LKEVLSLIKKAKRLFIYGLGSSGLAAQEFNYRLSRMGFYSEAVTDPHLMIIRSVLLEKDD 170 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++A S +G ++L + + K++A T F L + A ++T S Sbjct: 171 VVIAFSRSGQTKDLLKSLEAAKGKKAKLIAFTAFGDTPLTKMAHKVIWT-IHPVRYQYLS 229 Query: 242 ISACHAQGMLTDLLFIALIQ 261 + L DL+ L++ Sbjct: 230 TGLDMSVLYLIDLISFHLLK 249 >UniRef50_C8QBF9 Transcriptional regulator, RpiR family n=1 Tax=Pantoea sp. At-9b RepID=C8QBF9_9ENTR Length = 297 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 57/279 (20%), Positives = 115/279 (41%), Gaps = 5/279 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L R L + ++ +A ++ P+T +S +A+ VS +S+ K A+KLG+ G Sbjct: 14 IFLLARTLAPELGRKERSIARFIDDNPETLASMSITDIADYLDVSVASITKVAKKLGFTG 73 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK+ + + + E VP + + E + + A+ L + Sbjct: 74 FHDLKMNIGKHITVSEELIDVPPVSGGEFY--TEKIVESTLYNSILALQDALKAIDIAVV 131 Query: 123 HECVTMLRSAR---RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + RI++ G G SG + ++F KL+KIG ++ D H L T P Sbjct: 132 KSVAALFIHRSENARIVIAGCGGSGSICEDFNHKLLKIGIFSSVFSDSHKQLMTASLMRP 191 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+LL +S++G ++ G + + +T + + L + H + + + Sbjct: 192 GDILLTVSHSGQTTDIINMTKMANDKGAETICLTNYPNSPLSHISRHAIISSVKNNPITG 251 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + + + D +F + + E + E + ++ V Sbjct: 252 ENATTRIVHLNILDAIFTIIASKTSEFSQESLHNTRNAV 290 >UniRef50_A8FIJ8 RpiR family transcriptional regulator n=2 Tax=Bacillus pumilus RepID=A8FIJ8_BACP2 Length = 283 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 49/281 (17%), Positives = 120/281 (42%), Gaps = 7/281 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + +++ + L + +++ADY++ P L+ +LA++ G S +++++F+ +GY Sbjct: 3 DLIHKLQHKVVELTDAQRRIADYIVQHPMEVAFLTVDKLASKVGTSTATIMRFSAAVGYS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF + L A+ + + + N + ++ + L+ +EE Sbjct: 63 GFSEFQKELQSAMKHKADPQTRLEAN--LKHSNKSQLLHNHVELQFQNIQYALDNITEET 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSPD 180 + V + SAR ++ T + + V + ++ + ++ N + D + + + Sbjct: 121 FQQIVGKIASARHVLCTSVRSGRPVGEYMSFGINRLLGNCQYIDADQSDWVDDLVHFNSG 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D ++A+SY + + + G +VL IT + L + A + L + + Sbjct: 181 DFIIAVSYPRYAKRMKDLMEAAKSYGVEVLLITDSYSSPLTKYAQYVLPCSS----ASVG 236 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S ++ + + D + AL D E R+ ++ K+ Sbjct: 237 SHNSVVSAIFIVDFILSALAMNDPERTKPRLDQINHMLTKM 277 >UniRef50_A1WRM9 Transcriptional regulator, RpiR family n=2 Tax=Comamonadaceae RepID=A1WRM9_VEREI Length = 324 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 54/283 (19%), Positives = 100/283 (35%), Gaps = 9/283 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RI Q L +S +++AD++L P L +LA AGVS ++ +FA+ L + G Sbjct: 12 VAQRIAQALPRLTRSHRQVADFVLAHPLQVATLPIDELAAAAGVSVATANRFARALDFDG 71 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + + L +P + + + V + E+ + AT Sbjct: 72 YATFRAELVRGF-ESLVAPIERLRGNLEHPTTVAEVFATALDESRRNIEATRQSLDYAAC 130 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQ---ASSP 179 V + AR I + G GAS +A L + + + + + + + P Sbjct: 131 EAAVQRILKARSIYIGGFGASAWLAGLLQHGLDGSCNDVRMLSSVSGVTHSARTLMHAGP 190 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DL + +++ + A G VLA+T + A LY E + Sbjct: 191 QDLFIGLTFPRYLTDTVALAQIARSQGCAVLALTDRPNAPIAPLADVVLYCQT-ETSYRP 249 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 ++ L + L A+ + A V+ + Sbjct: 250 NCETS---VLALIEALTSAVALRAPGAAQSA-GRILQAVRPWL 288 >UniRef50_B0MBA6 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0MBA6_9FIRM Length = 286 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 60/259 (23%), Positives = 118/259 (45%), Gaps = 10/259 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L I YQ L +K++ADY+ PD ++ QLA +G S+++VV+ + LGY+ Sbjct: 6 NVLDSIDNLYQQLFSKEKQIADYIKDHPDEVVMMNVSQLAKASGTSEATVVRTCKHLGYQ 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ L+L LS + ++ + D + N + + S++ Sbjct: 66 GYYQLRLILSRDIGTKSNDIGI---------DADTDFVSYTFERNIQNLRNLSSNLSKDV 116 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L +C +L A + + G + +A + +++L + G + + L V S +D Sbjct: 117 LLQCALILLKAPAVHIIATGNTTPIALDLSFRLSRFGVQSFSSSISEYYLNNVSLGSKED 176 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN-SA 240 +++AIS +G +++ AAD +G +++IT + + L + + H L + E N + Sbjct: 177 VVIAISGSGTSKQVLQAADIAKDIGMTIISITSDSDSPLARVSDHILSSSEEHPLFNETK 236 Query: 241 SISACHAQGMLTDLLFIAL 259 + + D L A+ Sbjct: 237 EPLSHLCSMAICDTLLYAV 255 >UniRef50_B4SHK0 Transcriptional regulator, RpiR family n=3 Tax=Stenotrophomonas RepID=B4SHK0_STRM5 Length = 282 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 86/282 (30%), Positives = 138/282 (48%), Gaps = 4/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M LL+IR ++ ++++AD++L R SSQQLA+ G+SQSSVVKF+QKLG+ Sbjct: 1 MPPLLKIRSERGQMSAIERRIADFILDNAHLLRDYSSQQLASALGISQSSVVKFSQKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG+P LK ++ + +A P D +GE L + A T N E Sbjct: 61 KGYPDLKYSIGQDVARAGADPQQAPSEP-DSGDDYLRLGEALRRSKAQAEEETRQANPRE 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ V +L A ++ + G+G GL A+ FA +L +G D +LA + A+ P Sbjct: 120 EIERIVQLLDGAPKLFVYGLGDDGLYAREFAMRLSLLGLLVVPHTDPILMLANLSAARPG 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+LL S G +L+ + + +GGKV++IT T N L+ A L A ++ A Sbjct: 180 DVLLMFSEFGNLPQLSQLSRQFQDMGGKVISITRHTANPLRAHADAALAVCAHDRTPQVA 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPE---RIRHSEALVK 279 + A L D LF+ L + + + + + L+ Sbjct: 240 QLLYRSAMHALLDFLFVLLCHANPDRQQQLAVNLERIDHLLD 281 >UniRef50_A5IV96 Transcriptional regulator, RpiR family n=113 Tax=Staphylococcus RepID=A5IV96_STAA9 Length = 290 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 61/280 (21%), Positives = 127/280 (45%), Gaps = 5/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L I +Y + +++KK+A ++L P + SQ LA+ +S SSV++F++K+ Sbjct: 3 NVLTEIDSQYPYMTKNEKKIAKFILNSPQKVIKMRSQDLASLLDISTSSVIRFSKKITDG 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ +S+ + +V + ++ + KL T A+ N +++ Sbjct: 63 GFHDLKINISKYVPKASSIYNVEL----MNNESTESLRTKLHTRTTRALNHANNELNDKT 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + L+ + I + G GAS +VA + KL +IG N V++ H + + +D Sbjct: 119 IDQICHCLKRSETIFIYGFGASFVVATDLYQKLSRIGLNIQLVQETHIFATLLATHNSND 178 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSA 240 ++ I+ G + E+ + ++ IT N + Q ++ L +E + Sbjct: 179 SVILITNNGTQSEMQSMVKVIDDYHIPIITITSTRDNPVAQASNIVLTYGKTDENEMHMG 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + ++ AQ D+L+ + + + + I S+ + Sbjct: 239 ATTSLFAQMFTIDILYYRYVALNYHASLDFITQSKMALDN 278 >UniRef50_C5RF15 Transcriptional regulator, RpiR family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RF15_CLOCL Length = 289 Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 52/281 (18%), Positives = 121/281 (43%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN ++ + L +++K L Y+ P+ +S+ ++++ +S S++ + QKL Sbjct: 1 MNIFSKLN-KLTNLTENEKTLVSYMQDNPEGFVKMSALEISDACFISTSTIYRLCQKLDL 59 Query: 61 KGFPALKLALSEALASQ-PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G LK+ +S ++ E S+ + I+ ++ + KL + + ++LN+ Sbjct: 60 SGLSELKVQISLSINEYLKEQSSLDYNYPIKQNETQHQIVLKLKELYEQTLVSSLNLIDL 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E+L +L++A+ I + +NF +++ +IG + + L T S Sbjct: 120 EQLRLIANVLKNAQHIDFYTSAGNMYFVENFKFQMQEIGTFINVPIEEYHQLLTASTSDE 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN- 238 + + + +S+ G + AD + ++ I+ N L + A++ LY + E N Sbjct: 180 NHIAIVVSFEGRGVIIKRIADMLKVNKTPIILISSTNENPLTKYANYHLYLSSNENHFNK 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +S S + + D L+ + + ++ + Sbjct: 240 ISSFSTRLSLLYVLDCLYTCYFNLNYDKNVSYKLNAYKKLS 280 >UniRef50_UPI0001BC58DB RpiR family transcriptional regulator n=1 Tax=Fusobacterium sp. D12 RepID=UPI0001BC58DB Length = 283 Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 56/284 (19%), Positives = 123/284 (43%), Gaps = 9/284 (3%) Query: 1 MNGLLRI-RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 MN L + ++ Y L + +KK+A+Y + P LS+ +L E GVS +S+++F++ LG Sbjct: 1 MNKLNQFYKEHYNTLTKGEKKIAEYFVKNPKKVMMLSALELGKEIGVSDASILRFSKALG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 ++ F LK ++ +P+ + + K++ + + L Sbjct: 61 FQKFSDLKNYIASGF--STITPNDRMVKNWDNFHSQNDIVNKIVNSDLENIKEFLLHIDF 118 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASS 178 E++ V + A++I GIG+S ++Q W + ++GFN + + L + Sbjct: 119 EQIETVVNWMNKAKKIYFLGIGSSRAISQFMFWHMKRLGFNTECINEGGLGLYEAFSHIT 178 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D+++ S+ + + G K++ +T + + + L T E N Sbjct: 179 KKDIVMLFSFPRFLNDEVKSITLAKEQGAKIITVTSNPFSEISFLSDMVLETFVE----N 234 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 ++ L +++ A+ +++ E ++ +LVK + Sbjct: 235 DGFFNSYMVPMELCNIMLTAIFEKNKESIFTELKK-NSLVKDFL 277 >UniRef50_UPI0001C36367 transcriptional regulator, RpiR family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36367 Length = 299 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 114/268 (42%), Gaps = 3/268 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +++ R +G ++ +A Y+L + + +S+++LA + S+++VV+ +KL G Sbjct: 2 ILEKLK-RMEGFTHQEQAVARYILEHVEEIQQMSTEELARVSYTSKATVVRLCKKLDTAG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + LKL L L + I L+ + L K A+ T + + Sbjct: 61 YQELKLKLVSELVQNIRVNQLLNREPITETSTLQDILHTLPKLYDKAITDTELCMDKNVI 120 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 +R++ RI + G G S ++AQ+ A+K +G AA ++A + + + Sbjct: 121 KRICNRIRTSDRIDIYGNGISYILAQSAAFKFATLGMECAAYDSVNAHFLSAGK-TKKTV 179 Query: 183 LLAISYTGVRRELNLAADEMLR-VGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 I++TG + + A + V+ I G +++ + + + + Sbjct: 180 SFVITFTGANKSMIDTARYLKETTETYVVGIVGRHNEEIRKWCHEIVEIPSRDSLLSLKV 239 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPE 269 I++ A + D+ F L+ Q E + Sbjct: 240 ITSFTATTYVLDIFFSMLLAQTYESHVK 267 >UniRef50_B1Q8U9 Putative phosphosugar-binding transcriptional regulator n=1 Tax=Clostridium botulinum NCTC 2916 RepID=B1Q8U9_CLOBO Length = 291 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 57/281 (20%), Positives = 117/281 (41%), Gaps = 4/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M ++ + S+K + DY+L ++ + ++++ E ++ S+ ++ ++KLGY Sbjct: 1 MLLTEKLLNT--KFSPSEKIIVDYMLKHKYDIKNKTIKEISKETFINPSTFIRISKKLGY 58 Query: 61 KGFPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 KG+ LK + ++ + +D + KL K N + TL++ S Sbjct: 59 KGWNELKEKYLNEIKYLDSNFENIDANIPFDKNDSYISISNKLGKLNEITIKDTLSLLSN 118 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L V +L SA I L S L++Q+FA K+ +I + + Sbjct: 119 DDLKNAVEILNSASDIKLFANNESILISQDFALKMNRIKKYVSICTVDGEQVFEAFNCRK 178 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN- 238 + + ISY+G + L + + +LAIT N L A+ L E + Sbjct: 179 NSCAIIISYSGETKRLLETIPILKKYNIPILAITSLGNNTLANNANCVLRITTREHLYSK 238 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ ++ ++ + D+L+ + ++ E LV Sbjct: 239 ISNFTSNNSICFILDILYSCIFSKNFEKNLIHKIKVSKLVD 279 >UniRef50_C2HCM3 RpiR family transcriptional regulator n=12 Tax=Enterococcus faecium RepID=C2HCM3_ENTFC Length = 300 Score = 167 bits (423), Expect = 4e-40, Method: Composition-based stats. Identities = 47/282 (16%), Positives = 118/282 (41%), Gaps = 4/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M +I++ + S+ ++ +LL ++ Q++A V S++++ A+K+G+ Sbjct: 1 MLLREKIKEI--SFSPSENEVIQFLLSDSPALGEMTIQEIAERCYVHPSTLIRVAKKMGF 58 Query: 61 KGFPALKLA-LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ + + A L+E + V + D + + K+ + TL++ Sbjct: 59 DGWVSFRNAFLAETAYLEGNFQDVDANLPFSTTDGIMTIANKMASLEQMTIQDTLSLIHH 118 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++L + ++ A++I++ ++ L++Q+F K+ +I + V + Sbjct: 119 DQLQKAKQLMLQAKKIVIFASNSNTLISQDFMLKMKRIKMDVTIVTTFGESFYEAYNCTS 178 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN- 238 D + ISYTG + A+ + + +LA+T + L ++ L E+ + Sbjct: 179 DMCGILISYTGENNVILRTAEILKQNHVPILALTSIGDSTLSSMSTAALRLTTRERLYSK 238 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + + L D+L+ + ++ + + K Sbjct: 239 IGNFTINTSICYLLDVLYSCVFAENYQQNLVHLISVGQKFDK 280 >UniRef50_A0ZNS9 Putative uncharacterized protein n=3 Tax=Photobacterium RepID=A0ZNS9_PHOPO Length = 277 Score = 167 bits (423), Expect = 4e-40, Method: Composition-based stats. Identities = 95/270 (35%), Positives = 141/270 (52%), Gaps = 8/270 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + +I L+ S +K+A +L QP LSS QLA +A V QSS+VKF QKLG+ Sbjct: 1 MTIIAKIANIKSQLSPSAQKIAALILQQPAAVVSLSSLQLAQQANVGQSSIVKFTQKLGF 60 Query: 61 KGFPALKLALSEALASQPE--SPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 GFPA K A+ E LA Q + + NQI D L + +KL + T A+ T N Sbjct: 61 TGFPAFKNAIKEELARQQAIGNDPQQLQNQISHSDTLITIAQKLAHQKTDAIIETTNAID 120 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 E+ L + + +A+RI L G G S ++A++F+ KL+ +G A A +D + + + Sbjct: 121 EQNLKNIIALFINAQRIQLVGFGHSAIIAKDFSTKLLTLGMMAIAEQDSRSQIDIAKTLG 180 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT- 237 P D+ I Y G ++ L A G ++A+T L+Q A L T+A E + Sbjct: 181 PTDIQCHICYDGNHQDALLTAHSAKMKGATLIALTSPHSTPLRQLAQFSLDTLAIETSNH 240 Query: 238 -----NSASISACHAQGMLTDLLFIALIQQ 262 ++ SI++ AQ LTDLLF+AL Q Sbjct: 241 RQYQPHNYSIASHAAQQTLTDLLFMALTHQ 270 >UniRef50_Q21ZX8 Transcriptional regulator, RpiR family n=4 Tax=Comamonadaceae RepID=Q21ZX8_RHOFD Length = 310 Score = 167 bits (423), Expect = 4e-40, Method: Composition-based stats. Identities = 62/279 (22%), Positives = 113/279 (40%), Gaps = 6/279 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L RI + S + + +L P S +QLA+ AG S +V++ + LGY Sbjct: 4 KVLARIAETMAHAPTSRRSVLAMILQDPQRVLDESFEQLAHRAGSSVPTVMRTCRDLGYP 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G KLAL++ LA P+H +++ D + V K+I+ A+ + Sbjct: 64 GLREFKLALAQELAVS----GSPLHRRVQLHDGAQEVISKVIRGAATAVSGVQAQLGVAE 119 Query: 122 LHECVTMLRSARRIILTGIG-ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + A R+ +G S +A + +L ++G + A D+H L + Sbjct: 120 VEAAADAIVRASRVDCYSVGVTSSFMASDMQARLFRLGLVSNAYLDIHLQLVSAATLGTQ 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 ++ AIS+ G L A D G V+A+T L + A L E Sbjct: 180 GVVFAISHVGGMPSLIEAVDVAHSQGATVIALTQ-QETELAKHADIVLGIHVPEDPIMHV 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 A + +++ + + Q+ +LA +R+ ++ Sbjct: 239 GTEAYLVHLTVIEIVTVLVAQRLGDLAVKRLGGVREVLS 277 >UniRef50_Q8RAK1 Transcriptional regulator n=1 Tax=Thermoanaerobacter tengcongensis RepID=Q8RAK1_THETN Length = 263 Score = 167 bits (422), Expect = 6e-40, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 115/261 (44%), Gaps = 8/261 (3%) Query: 21 LADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPES 80 +A Y++ + A ++S+ +A E +S+S+VV+FA +LGY GFP LK AL E + + + Sbjct: 2 IAQYIVNNYEKAVFMTSKDIAKELKISESTVVRFASELGYNGFPELKTALQEFVKGKLTT 61 Query: 81 PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGI 140 +I + + +++ + ++ TLN + V + +AR+I + G+ Sbjct: 62 LQRL---EITKESNEEKLLAEVLNLDIGSIKQTLNEVDVGTFKKVVDCILNARKIYIVGL 118 Query: 141 GASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASSPDDLLLAISYTGVRRELNLAA 199 S ++A+ + L + N V R + L + +DL++ I + R Sbjct: 119 RTSTVIAEYMGFYLNLLRDNVIVVKRGVSDLFEQILRVEREDLVIGIGFPRYSRRTVDLL 178 Query: 200 DEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIAL 259 G V+A+T + L + A L + + + + + A L + + +A+ Sbjct: 179 KYAKSQGATVIALTDSFISPLARIADEVLTA----KNSIISFVDSLVAPLSLVNAIVVAV 234 Query: 260 IQQDLELAPERIRHSEALVKK 280 ++ E E + ++ Sbjct: 235 GTRERETITGVFEKLENIWEE 255 >UniRef50_C3FD32 Phosphosugar-binding transcriptional regulator n=1 Tax=Bacillus thuringiensis serovar monterrey BGSC 4AJ1 RepID=C3FD32_BACTU Length = 294 Score = 166 bits (421), Expect = 6e-40, Method: Composition-based stats. Identities = 55/282 (19%), Positives = 114/282 (40%), Gaps = 6/282 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + ++++ + S+ ++ YL Q + + +++Q++ E S++++ A+KLGY Sbjct: 1 MLLIEKMKE--DIFSPSESEIIVYLFKQRENIKDKTTKQISKETYTHPSTLIRIAKKLGY 58 Query: 61 KGFPALKLALSEALASQPESPSV-PIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ LK + + S + D + V K+ N + TL++ + Sbjct: 59 SGWVELKNSFLGEIEYLNSHFSSIDANYPFDDRDSIMTVANKMALLNQTTISDTLSLLNH 118 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L ML A I + + + L+ +F K+ +IG + + S+ Sbjct: 119 DDLQRATNMLDEAAHIKVFSMYHNLLICHDFKSKMNRIGKHVSLCTV--DPHFEAVNSNT 176 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN- 238 + + ISY+G ++ + R V+A+T N L + A L E+ + Sbjct: 177 ETCAIVISYSGESEDIVGRLPFLKRKKVPVIALTSIGENTLTKYADCILRITTREKLYSK 236 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 S S+ + L DLL+ + +D + E Sbjct: 237 IGSFSSNESICFLLDLLYACVFSEDYKNNLEYKIRISKYFDH 278 >UniRef50_B3EUN5 Transcriptional regulator, RpiR family n=1 Tax=Bordetella bronchiseptica RepID=B3EUN5_BORBR Length = 303 Score = 166 bits (421), Expect = 6e-40, Method: Composition-based stats. Identities = 59/280 (21%), Positives = 114/280 (40%), Gaps = 6/280 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L ++++R L+ + K + +L P A + +QLA +AGVS ++V+ + G+ Sbjct: 7 NLLQQMQERSPELSPAQKMVVRVILDDPQAAVLATVEQLAQKAGVSMPTIVRTCRSFGFV 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 +AL+++ A+ S +H + DD + V K+I +++ Sbjct: 67 SVRDFMVALAQSYAAT----SSLLHRSVLADDGVADVSSKVIHAAISSLSELDRDLDVVI 122 Query: 122 LHECVTMLRSARRIILTGIG-ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + + A RI +G AS +A +L ++G + DMH L + Sbjct: 123 LDKVAERVAQAERIDCYSVGAASTFIAHELHSRLFRLGLRSNTFFDMHQQLMSASTLGAK 182 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 + IS+ G AA G V+A+T L A L + Sbjct: 183 GVAFVISHVGRMPYTLEAARYAREHGATVVALTQ-PGTPLAAAADLVLAVSGPQDPLRRV 241 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A ++ ++L + L Q+ +A ++ + L+++ Sbjct: 242 GTETQLAHLVVIEILMVRLAQKLGPVAVHGLQGFKQLLQQ 281 >UniRef50_A5KIQ4 Putative uncharacterized protein n=2 Tax=Ruminococcus RepID=A5KIQ4_9FIRM Length = 288 Score = 166 bits (421), Expect = 7e-40, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 109/282 (38%), Gaps = 3/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + I+++ + + ++ + Y+L P+ +SS++L + S +SV +F QK+G Sbjct: 1 MSIIQIIKEQM-NMTERERDICRYILENPEKIEEMSSRELGHATFTSAASVTRFCQKIGV 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGFP K+ L + + + + + K K A+ T S Sbjct: 60 KGFPEFKMQFVRELRTG--GMEDVSAVTMSERENVVTMVRKAEKIQRQAVEETNKELSYT 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L ++ A + + +A+ G ++ +++ + Sbjct: 118 QLVRIGKLIADASCVDFYVYDMNIYLAKYGCALFFHAGKLSSVHSEINIQGLHAAMPADG 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 + + IS+TG +L + R G K++ I+G + Q A+ LY E+ Sbjct: 178 HVAIIISHTGKNEQLAEIEKMLHRGGTKIIVISGNRKGVVGQYATEFLYAAGSEKVEEFW 237 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 S + + L D+L+ + E E K L+ Sbjct: 238 SSTFFASGKYLLDILYGMEFSRRYEENIALNSRYEKSGKNLL 279 >UniRef50_B2UF98 Transcriptional regulator, RpiR family n=2 Tax=Ralstonia pickettii RepID=B2UF98_RALPJ Length = 287 Score = 166 bits (421), Expect = 7e-40, Method: Composition-based stats. Identities = 68/279 (24%), Positives = 116/279 (41%), Gaps = 6/279 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +R + L+ + + +A +L P+ + S + LA AGVS ++V+ Q LG++G Sbjct: 8 LLNALRAQLPALSPAQQGVARLILDAPELSLEQSVETLAVRAGVSMPTIVRMCQALGFEG 67 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 K L+ LA + + DP LV K+I T A+ S ++ Sbjct: 68 LREFKATLAAELA----HAQPTLPGHVGRADPPALVASKVIDGATRALAKLRESLSTTQV 123 Query: 123 HECVTMLRSARRIILTGIG-ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + ARR+ G AS +A + +LM++G + A D H L + D Sbjct: 124 DAAAERIARARRVDCYAAGAASSFMANDMQARLMRLGLASNAYFDAHLQLVSAAMLGASD 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++A S+ G L + G V+AIT L +RA L E A Sbjct: 184 VVVAFSHVGRMPYLLESIAYAAEQGACVIAITQ-AGTPLAERAQIALTVDVPEDAVMRVG 242 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A + ++L + Q+ E+ R+R + L+ + Sbjct: 243 TEAYLVHLTVIEILMTCVAQRRDEMVRSRMRAIQRLLTE 281 >UniRef50_A6BIK8 Putative uncharacterized protein n=9 Tax=Clostridiales RepID=A6BIK8_9FIRM Length = 315 Score = 166 bits (420), Expect = 8e-40, Method: Composition-based stats. Identities = 60/280 (21%), Positives = 114/280 (40%), Gaps = 8/280 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L I +RY ++ KKLAD++ D A L++ ++ E GVS+S+VV+FA LGY G Sbjct: 18 LLKMIDERYHKFSKGQKKLADFIREDYDKAAFLTAAKMGGEVGVSESTVVRFATALGYDG 77 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 +P + AL E + + S R + ++ + + T+ E Sbjct: 78 YPEFQKALGELVRMKLNSIQRMEVTYGRI--SQGEILTSVLHSDIEKIKLTMEAIDHEAF 135 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAV--RDMHALLATVQASSPD 180 V + A+RI + GI + +A ++ L I N AV + + S D Sbjct: 136 EMAVDTILKAKRIYVIGIRSCSPLASFLSFYLNLICENVTAVNTNSSSEIFEQLIRVSED 195 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ IS+ A + V+ +T + + +S L ++ + Sbjct: 196 DVVIGISFPRYSMRTLKALEFASNRKATVITLTDSVHSPMTLYSSCNLIARSDMASI--- 252 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + A + + L +AL + + + E + + Sbjct: 253 -VDSLVAPLSVINALVVALCMKKQKEVITTLETLEQIWDE 291 >UniRef50_Q88UA4 Transcription regulator n=1 Tax=Lactobacillus plantarum RepID=Q88UA4_LACPL Length = 287 Score = 166 bits (420), Expect = 8e-40, Method: Composition-based stats. Identities = 60/281 (21%), Positives = 120/281 (42%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + ++ ++ ++A Y+L D ++ ++LA + S S++++ AQKLG+ Sbjct: 1 MQLIEQL-SHRSDFTTTETRIATYILSHQDAMPNILIKELAAKTYTSHSAIIRLAQKLGF 59 Query: 61 KGFPALKLALSEALA-SQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 GF + AL+ + + + +V + D + + +K+ T A+ + Sbjct: 60 HGFRDFQRALTTEIVINTQATTNVDANFPFTDKDAVTEIIKKMADLKTNAIANAQHQLRP 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E L + +L AR I+L G S L A++F KL+KI A + + +P Sbjct: 120 EVLTKSAYLLNKARHIMLFSQGDSQLRARSFQNKLVKINRFAQIAEMYADEAWNIASLTP 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE-QATN 238 D + ISY G A V+ +TG + LQQ A++ L E Sbjct: 180 QDCAMFISYAGNTDVHQRFAKYCQAHHIPVIVLTGNVDSPLQQFATYQLVITQNERNNAK 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + ++ + + D LF + + + ++ ++ L++ Sbjct: 240 LGTFASQVSFDYVLDTLFAIMYANNFQTNLAHLKTTQLLIQ 280 >UniRef50_C2MLM8 Transcriptional regulator n=1 Tax=Bacillus cereus m1293 RepID=C2MLM8_BACCE Length = 280 Score = 166 bits (420), Expect = 8e-40, Method: Composition-based stats. Identities = 56/278 (20%), Positives = 112/278 (40%), Gaps = 6/278 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ I+Q Y L++ +K+A YLL QP + ++ + GVS+++V++F + Sbjct: 1 MDLKKIIQQEYNQLSKGQQKVAKYLLEQPGEFAVKLASEIGEQVGVSETTVIRFCYSIKL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF L+ + E L S +++ + K+++ + + T+N E Sbjct: 61 SGFSELQKMVREQLLLMQSSLGQYFSSKLELAEQPH-FYAKVMERDCQYIQQTINNIDEN 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNA-AAVRDMHALLATVQASSP 179 ++ + V L +I + G+ +S A L + N + + LL T+ Sbjct: 120 EIEQVVDQLIKTEKIYVLGLKSSFSAANWLTMTLGLVRGNVQILHPETNDLLCTLSEMDH 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 L+ IS+ +E A+ G V+ IT +++ A + E++ Sbjct: 180 RSTLITISFHRYLKETIKVAEMAKEQGAFVIGITDSPLAPIREYADAIFSMYSSERS--- 236 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 +I A + + + +D E +R E L Sbjct: 237 -TIDATPVLFSFLNAIVAGVSIKDKERFEKRKDRYEKL 273 >UniRef50_C7NDE7 Transcriptional regulator, RpiR family n=2 Tax=Leptotrichia RepID=C7NDE7_LEPBD Length = 286 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 115/267 (43%), Gaps = 1/267 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + ++ ++ + ++K++ADY+L + LS++ LA +A VS+++VV+F +KLG + Sbjct: 2 IINKL-EKKENFTNNEKEIADYILRHLEEIHLLSAENLAKKAFVSKATVVRFCRKLGVER 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + + L + + + + + + + + + AT + Sbjct: 61 YREFQRRLDKEVEEMMKIKGLLSEEPVNSETKYDEIISIIPSLYERVIGATKLNLDTTVM 120 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + L++A++I + G G S ++A+ ++K M +G +AA ++ D+ Sbjct: 121 EKIIEKLKNAKKIEIYGTGISYILAKLTSFKFMTLGIESAAYDGLNEHYIISAEKGEKDI 180 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L IS +G + A+ + + V+ I + +++ S + A + + Sbjct: 181 ALIISLSGTNPYMIRIAEYLKKRNVFVVGIGNGSSEEIKKACSEYIEIHAPNYILSFEMV 240 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPE 269 S + D+ F +L+ + Sbjct: 241 SLFTGINYVLDIFFTSLLVLNYYKNIN 267 >UniRef50_C3RH23 Predicted protein n=2 Tax=Bacteria RepID=C3RH23_9MOLU Length = 294 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 47/273 (17%), Positives = 105/273 (38%), Gaps = 2/273 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + ++ + L +K + DY++ P +S +LAN + S S++ + +KLG KG Sbjct: 13 IIDKMNT-LENLTNQEKAVVDYIIANPKALLEMSVNELANASYTSASTITRLCKKLGTKG 71 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + +K + + + + + + + A+ T ++ + Sbjct: 72 YADMKFIYVSEYSEMMKLKDSLKVVPFSRNSGIDDIIHTMPLIYSRAIDHTRSMLDRNTV 131 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 +++ A+ I L G G + +A+N +KL +IG +A A + Sbjct: 132 IRVSNLMKRAQVIDLYGDGINFEIARNICYKLDEIGISANAYNSIQWNHCKRLQQDKIPS 191 Query: 183 L-LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + +S+TG + AA + + L+ITG L + + E ++ Sbjct: 192 FSILLSHTGKNPSMVDAAKRLKQYNIPSLSITGNVDKRLLNLTDYNFQIMITENTFEFST 251 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 + + + D+L +LI + + + Sbjct: 252 VIFTMSSLYILDILVASLIVHNYDKIERHLEEL 284 >UniRef50_B9DVM9 RpiR family regulatory protein n=2 Tax=Streptococcus RepID=B9DVM9_STRU0 Length = 295 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 51/281 (18%), Positives = 116/281 (41%), Gaps = 4/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M +I + S++K+ D++L + + S+ Q+A E S+S++V+ AQKLG+ Sbjct: 1 MFINEKIE--LSAFSPSEQKVVDFILKEKEHISEWSTSQIAKETYTSKSTLVRIAQKLGF 58 Query: 61 KGFPALKLALSEALASQ-PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ + + A E + ++ + + D + KL + TL+++ Sbjct: 59 SGWTSFRQAFHEEVTYLLKQADAHDANLPFDKTDNNLEIASKLAHLKKEVIDETLHLSRN 118 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L++ + ++ AR + L + + FA + +I + + + Sbjct: 119 KDLNKAIHLISHARTVHLFAASNNLHNGREFAHNMKRIQKDVQLHDLHGEIHFDALLAEE 178 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D + ISY+G L A + + ++A+T N + Q + L +E+ + Sbjct: 179 DSCAIIISYSGGTLSLIKVAQILRKKEIPIIALTSLGDNPISQLSQVTLRLSTKEKLYSK 238 Query: 240 ASISAC-HAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 A + + DLL+ +Q+ + + + ++ Sbjct: 239 IGTYATDTSITFILDLLYSIYFRQNYDYNLAFRQKTSQEIE 279 >UniRef50_B0N5H7 Putative uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N5H7_9FIRM Length = 264 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 44/265 (16%), Positives = 116/265 (43%), Gaps = 3/265 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + + + +S+ ++ +++ P+ +++ +LAN+ S +++++ +KLG+ Sbjct: 1 MSLIDNL-SNEKLFTKSEIEVINFIKENPNLVLNMTIGELANQTFSSNTTIIRICKKLGF 59 Query: 61 KGFPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 GF K+ + S + + + ++P + + ++ + + Sbjct: 60 NGFRDFKIEYLRNIESLKYLNNETDFTLPFQENEPTWQIINSISNVYKDSINLINSELNI 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 +L + V +L ++ R + GIG S + A NF KL+KIG + + + + + Sbjct: 120 AELEDIVEVLDTSPRTFVFGIGDSKITAMNFINKLVKIGKFFILTTENNEQESFCKGITK 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD L I+Y + + K++ IT N L + +++ + +E+ Sbjct: 180 DDCCLFITYD-KNESYKACLKILFQKRCKIIVITSNCDNPLVKYSNYHIIIPHKEKDEKI 238 Query: 240 ASISACHAQGMLTDLLFIALIQQDL 264 A+ + A + +++ + +++ Sbjct: 239 ATFYSQLAFNYILSIIYSLIYKRNK 263 >UniRef50_C3RJC3 Sugar isomerase n=5 Tax=Bacteria RepID=C3RJC3_9MOLU Length = 291 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 51/269 (18%), Positives = 116/269 (43%), Gaps = 2/269 (0%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 + S++ + D++L + + + S+ +A E S S +V+ ++KLG+ G+ K A E Sbjct: 5 KFSPSEEIVIDFILTKQERIKDYSTTMIAGETYTSPSLLVRISKKLGFSGYNNFKNAFLE 64 Query: 73 ALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 + ++ + D + + K+ + T ++ TL++ + L + V L+ Sbjct: 65 EVQYLHKSHLNIDANQPFLKTDSIMNIANKITQLKTESLNDTLSLIHHDTLQKAVRALQK 124 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGV 191 + + + G+ A+ F +KL IG NA + ++ +DL + +SY+G Sbjct: 125 SNTVKVFGVSNLSFPAEEFVFKLRHIGKNAEVFVLNSNIYQEAMMANSNDLGICLSYSGE 184 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN-SASISACHAQGM 250 E+ A+ + + ++AIT N+L + A L E++ + + S+ + + Sbjct: 185 SGEIIKIANILKKKNVPIIAITSIGENSLTRLADIVLRVTTREKSYSKIGAYSSLESISL 244 Query: 251 LTDLLFIALIQQDLELAPERIRHSEALVK 279 + D+L+ + + Sbjct: 245 ILDVLYSCFFTTAYDQHYTFKTELAKNTE 273 >UniRef50_C8Q2X6 Transcriptional regulator, RpiR family n=1 Tax=Pantoea sp. At-9b RepID=C8Q2X6_9ENTR Length = 283 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 58/277 (20%), Positives = 124/277 (44%), Gaps = 7/277 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +I+ L+ +++K+A +L A S QQLA AGVS SVV+FA+++G+ G Sbjct: 2 LAQQIKDNMAELSPAERKIARAMLADYPGAGLGSVQQLAERAGVSLPSVVRFARRMGFGG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F + AL + ++ Q + P + + + + E IK +T A+ +L +E ++ Sbjct: 62 FVDFQQALRDEISEQAKGPLQRLETWVTT-ESASALMEAAIKSSTLAIQCSLRDIAEYEI 120 Query: 123 HECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASSPD 180 E ++ + ++ G G S +A F L ++ + + H + + + + Sbjct: 121 AEATRLIGAKEHHVILGGGRISQSLAMYFGRNLQQVRRGVDVLAENHHDRIQQIIDVNKN 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ + + ++++ A E++ G ++A+T + + A L E Sbjct: 181 DVFVLFDFRRYQQDMYELAQEIVARGATLIAVTDTQLSPIASLAKVVLAIHVETPWLFDG 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 A +L D + ++++ + +R++ EAL Sbjct: 241 ----YAAGIVLIDAIIASIMESQGDKTVQRLQQWEAL 273 >UniRef50_B1M7S3 Transcriptional regulator, RpiR family n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M7S3_METRJ Length = 312 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 61/283 (21%), Positives = 117/283 (41%), Gaps = 8/283 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + RI Q Y L+ + +++A ++L P A L +LA+ GVS ++ +FA+ +GY Sbjct: 9 SVAQRIAQAYPSLSAAHRQVARFVLDHPLRAATLPVNELADLVGVSVATANRFARAVGYA 68 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + AL + +P + + + + + + + AT E Sbjct: 69 GYAKFRAALVLGY-EKALAPVEKLRGGREQPTTVSGILDGALADIVRNIEATRRGLDGET 127 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAA---VRDMHALLATVQASS 178 V +R ARR+ + G+G+S A A L + + T++ + Sbjct: 128 CGRAVEAIRQARRVYVVGLGSSSWPAGILARNLDVNREDVHLLATLEGPGFAARTLRRLT 187 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 DDL++A++ + A+ + G VLA+T + L A+ LY + Sbjct: 188 ADDLVIALATPRYFADTVRLAEIARKHGAAVLALTDGPHSPLVATATLALYAQTDCHYFA 247 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++ + L + L A ++L P R +EA++ L Sbjct: 248 ----ASDASLTALVEALASAFAHATVDLVPAATRVTEAVLPWL 286 >UniRef50_C9KLC1 Transcriptional regulator, RpiR family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KLC1_9FIRM Length = 279 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 103/271 (38%), Gaps = 3/271 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + ++++ + S++ +A YLL ++++QLA E S +++V+F QKLG+ Sbjct: 1 MNLIKELQEQQD-FSDSERTIATYLLQHSRLLPSMTTRQLARETYTSSAAIVRFCQKLGF 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ ++ + + + + D + + +K+ + A+ T + + Sbjct: 60 GGYTEFRVEFLAQMM-KYLEQPYGVELSVTNQDSVHSILDKVTRLEIDALQETYQMLDAK 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + +L+ + I + + +A A + + M + + Sbjct: 119 EFVRAFAILQKTQHIDFYAMDNNLDIANMAASSFIMANKCSTVHTAMTMQYLQATGAPKE 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 + IS TG R L A + G L IT + L A + + Sbjct: 179 HVGFFISRTGENRMLIDIAHLLKLRGNPFLLITANQESTLASLADVVFPVASVKSMEELG 238 Query: 241 SISACHAQGMLTDLLFIALIQQ-DLELAPER 270 +TD+LF L+ + D A E+ Sbjct: 239 PRVFLMGAKYVTDVLFAVLMTRVDFRNAQEK 269 >UniRef50_A4IT25 Transcriptional regulator n=5 Tax=Bacillaceae RepID=A4IT25_GEOTN Length = 262 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 95/259 (36%), Gaps = 19/259 (7%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 ++ ++ D + DY++ P ++ ++LA VS +V++F +K+G GF K Sbjct: 5 EQIAQFSELDYAIYDYVVKHPHEVAYMRIRELAEAVHVSPPTVLRFCKKVGCDGFSEFKT 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L + + + + + TL + E + + T+ Sbjct: 65 KWKLHLRENERTSII----------SSQEALREFFER-------TLTADYERTILDAATV 107 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + A +I G G+SG++A+ + + ++D + + +++A+S Sbjct: 108 IARADHVIFVGSGSSGILAEYGSRYFSAFQKFSVYIKDPFFPIY--GHYFTNCVVIALSV 165 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 +G + GG +++IT +L + + L A + ++ Sbjct: 166 SGETQHTLAQVHRFKEKGGTIISITNRKHCSLANISDYNLTYYATAERMGQTDVTTQLPV 225 Query: 249 GMLTDLLFIALIQQDLELA 267 L + L + + Sbjct: 226 VYLLERLAKEMYRLLPTQT 244 >UniRef50_C0BYY2 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BYY2_9CLOT Length = 280 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 62/272 (22%), Positives = 114/272 (41%), Gaps = 11/272 (4%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 + +++AD L+ + + S +A ++ VS +SV +F Q LGYK F A + +L E Sbjct: 2 HFNPAMRRIADILITDTQSLLNCSIGDIAEKSNVSAASVTRFVQILGYKNFKAFRQSLQE 61 Query: 73 ALASQPESPSVPIHNQIRGDDP-LRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 L + + SV + + +I+ + TL++ + + + S Sbjct: 62 YLLAGQDQLSVTSSEIAMSESSAPESICNYVIQSEIEMLRDTLSLMDFPTMDKVAKKICS 121 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGV 191 AR +I G G S + AQ+ + ++G + D H++L + + P+DL++ IS G Sbjct: 122 ARHVIFIGEGRSYIAAQSACNRFDRLGILCSCYGDPHSMLPAIGMAQPEDLIVGISNFGH 181 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-------AEEQATNSASISA 244 R + G +AIT + L Q+A + T + + +S Sbjct: 182 SRPVVNCIKYAREHGVPTVAITSSQDSPLAQQAESLIITGFNYNNLANQGEIICYEPMSE 241 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 Q L D L+ LI + + ER+ Sbjct: 242 NLPQFSLIDCLY--LIAGNY-QSKERVNRYYE 270 >UniRef50_UPI0001B56E76 RpiR family transcriptional regulator n=1 Tax=Streptomyces sp. SPB78 RepID=UPI0001B56E76 Length = 294 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 110/278 (39%), Gaps = 2/278 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + IR GL+ ++ ++A +L + LS ++A A + SSVV+ Q+L ++ Sbjct: 11 DLAAHIRSHLSGLSGAEARVARTVLDLGERLVGLSVSEVAALAETAPSSVVRTCQRLEFR 70 Query: 62 GFPALKLALSEALASQPESPSVPIHNQI--RGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 GF LK+A + P DP + + A+ Sbjct: 71 GFQELKIAAARQAPRPAREPGAAGGPADSGDAADPAARALAATLAASREALDGLRTTLPP 130 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 +L E +L A R+++ G G S V + A++L +G A D + + Sbjct: 131 ARLGEAARLLHGASRVLVVGAGLSQPVVADAAYRLRAVGRAVDAPTDPLTAQLSAGLLTD 190 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 + LA+S+TG R AA G VLA+T + + L + + L ++ Sbjct: 191 SSVCLAVSHTGATRSTVDAARRARLQGAAVLALTSYVRSPLTETSDCVLVAGGQDLVLGL 250 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 ++++ A + D L L+ + A + S + Sbjct: 251 EAVASRLAHLAVIDALVQTLLDLGGDEARRALDVSAEV 288 >UniRef50_A6LS27 Transcriptional regulator, RpiR family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LS27_CLOB8 Length = 288 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 55/274 (20%), Positives = 113/274 (41%), Gaps = 5/274 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + L +++K LA+Y+L + +S +LA + S S++ + +K+G Sbjct: 1 MTIYNLLL-YANNLTETEKLLANYILENQEQVAGMSLDELAKVSFSSISTIHRLCKKIGL 59 Query: 61 KGFPALKLALSEALASQPESPSV-PIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 GF K+ E L S+ P I+ + DD + + + + T + + Sbjct: 60 TGFKEFKIKFVEELYSKMNKPENIDINFPFKKDDTQFQIASNIKQLYIDTLTNTFSFFNS 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF--NAAAVRDMHALLATVQAS 177 E+L + V ++ +A + + + + A NF K+ IG N + + A + Sbjct: 120 EQLEDAVDLIYNAEIVDVYAVTNNIQTALNFQDKMQSIGRYVNVSLIPMNQVYRAAASNN 179 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA- 236 + + +SY+G E+ A + R + L I N L + + ++ ++E Sbjct: 180 KNKQVAIILSYSGKTPEIKEIALVLKRKEIETLVICSAQENYLTKLFKYHIFVSSKENLK 239 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPER 270 + S+ A + D++F + +D E E Sbjct: 240 KKISHYSSHIATQYVLDVIFSCIFNKDYEKNMEY 273 >UniRef50_C0EW96 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EW96_9FIRM Length = 306 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 56/282 (19%), Positives = 122/282 (43%), Gaps = 9/282 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L RI ++ ++ ++LA Y+ D A +L++ +L EAGVS+S+VV+FA +L Y+ Sbjct: 22 NLLQRIEKKSSEFSKGQRRLAQYITENYDIAAYLTASKLGKEAGVSESTVVRFAYQLDYE 81 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNV-NSEE 120 G+P L+ A+ + + S + R + + V + ++ ++ + T+ EE Sbjct: 82 GYPELQKAIQVIVKTNSNSIQRMSLSSKRYQE--KGVLKSILYTDSERLRDTIQSGVDEE 139 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR--DMHALLATVQASS 178 + + V ++ ARR+ + G ++ +A + + N V L + S Sbjct: 140 EFNRSVMLINDARRLYILGARSAAYLAGLMGYYFKMMFDNVIIVDANSTSETLEQIYDIS 199 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D+++ I++ + A G K +A+T + + + A L ++ Sbjct: 200 DKDVMMGITFPRYSKRTICALQYAKNHGAKTIALTDNMQSPIVEYADCKLIAKSDVMTI- 258 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + + + + A+ + +R+ E L + Sbjct: 259 ---VDSLVCPLSVVNAMVTAIALLRKDDVEKRLMALEELWNE 297 >UniRef50_B5XS91 Transcriptional regulator, RpiR family n=3 Tax=Enterobacteriaceae RepID=B5XS91_KLEP3 Length = 285 Score = 164 bits (416), Expect = 2e-39, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 115/279 (41%), Gaps = 7/279 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN +I + GL+ ++ A++ L LS + A EAGV +++++ AQ+LGY Sbjct: 1 MNLREKIINEFGGLSPELQRAAEFSLQNASQLVVLSMRAFAAEAGVKPATLLRLAQRLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +G+ LK + L + ++ + + +++ + + A + T N + + Sbjct: 61 RGWSELKSDFIDDLGLRNDTYVSKAEKMMAR-GTQTQLYKEVFQAHQANLTFTQNE-NAQ 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASSP 179 ++ + VT+L SA + + G AS +A + + + + + + + Sbjct: 119 EMEQAVTLLDSAENVYICGFRASFPIAWSLFYVYRLFNRQVSLIDGLASNIEVFTRELTN 178 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D +L S+ RE + G K+LAIT + L Q A L + + Sbjct: 179 RDCVLLTSFAPYSRESLDVLRAARQAGAKILAITDSPVSPLAQAADCTLLFSIDSPSF-- 236 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + + L + L L+ + A +I +E + Sbjct: 237 --FPSVVSGMGLAECLLAMLVVRHGREAVSKIESAERYL 273 >UniRef50_D0KI21 Transcriptional regulator, RpiR family n=84 Tax=Gammaproteobacteria RepID=D0KI21_PECWW Length = 285 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 103/279 (36%), Gaps = 10/279 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +IR+RY L++ +++A Y+L ++ + +A A V S++++FA + G Sbjct: 10 LQEQIRERYDSLSKRLQQVAHYVLDNTNSIAFDTVAVIAERADVPPSTLIRFANAFDFSG 69 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRG-----DDPLRLVGEKLIKENTAAMYATLNVN 117 F +K L + S + + + + + N AM Sbjct: 70 FNEMKQLFRMNLVEETASYTDRARLFRAMEADAVPETPLDILHEFARSNAQAMQQLAART 129 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQA 176 ++ L + V +L A I + G+ S VA + L + N V + Sbjct: 130 PQDDLQKAVDLLAQAETIYIVGLRRSFSVATYLTYALSHLESNPILVNGLGGMFREQLSR 189 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 + D +++IS++ +E + ++ + G + + IT + L + C + Sbjct: 190 VNSRDAVVSISFSPYSQETVMVSEMAAKAGARQIVITDSQISPLATLSDVCFVV----KE 245 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 + + A L L ++L + + + Sbjct: 246 AQVDAFRSQSATLCLVQSLMVSLAYRQGNGTEQSEKQRR 284 >UniRef50_A6W619 Transcriptional regulator, RpiR family n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W619_KINRD Length = 296 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 70/268 (26%), Positives = 120/268 (44%), Gaps = 2/268 (0%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 S ++ LL P A L+ LA S+++VV+ A+ LG+ G+P +L L+ Sbjct: 18 PSATASGARVLQALLADPAGAAQLTVTDLARRTSTSEATVVRTARSLGFAGYP--QLRLA 75 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 A A P+ + + L V L T A+ AT L + + Sbjct: 76 LAAAGAHHEPAALLTGSLEDTADLATVVATLAAVETEAVAATARTLDVAALAAAADAVHA 135 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGV 191 AR + GIGASGL+A +F K ++G + HA L + P D LA+S++G Sbjct: 136 ARVVDCYGIGASGLLAADFDHKAARVGLVTRLRTEGHAALVSSALLGPGDAALAVSHSGR 195 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGML 251 +L +A + G V+A+T + L A H L E A + ++++ + ++ Sbjct: 196 TPDLVGSARQARERGAAVIAVTSSPGSPLAAAADHVLVATGRETAYRAGAMASRASSLLV 255 Query: 252 TDLLFIALIQQDLELAPERIRHSEALVK 279 D L++A++Q+ A +R + V+ Sbjct: 256 LDCLYVAVVQRLGPAATAALRGTYRAVE 283 >UniRef50_A3IB77 Transcriptional regulator n=1 Tax=Bacillus sp. B14905 RepID=A3IB77_9BACI Length = 287 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 56/283 (19%), Positives = 112/283 (39%), Gaps = 7/283 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N RIR+++ L + K +A Y++ P +S+QL + S ++V++ + LGY Sbjct: 3 NYNERIRKQFNELTKRQKLVAKYIVDFPKEVAFQTSKQLGIASETSDTTVIRLSYALGYS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRL--VGEKLIKENTAAMYATLNVNSE 119 GF L+ + L S PI L+ + + +I+++T+ + ATL Sbjct: 63 GFSELQKEIQATLLEDSSPISDPIEGLRSTSKSLKDTNLIQHVIEKDTSYIRATLEQIDY 122 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASS 178 + + + +L S+ + I+ G +S A ++ L + N ++ + Sbjct: 123 TQYKKAIDLLISSEKRIVIGFRSSYGPANWLSFSLNVVVGNTFLYRGEIEDSNYLLSLID 182 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 LL+AIS+ +E N + G +V+ IT + L + +A + Sbjct: 183 EKTLLVAISFPRYSKETNAFVKAAKKKGAQVIGITDDELSPLGLLSDILFKVVAPSPISL 242 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + L +LL + D +R+ + Sbjct: 243 KGA----TPTFALLNLLITGIAASDEIKVQKRMEDYDQTSDDF 281 >UniRef50_C7CRC1 Predicted protein n=24 Tax=Enterococcus RepID=C7CRC1_ENTFA Length = 270 Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 110/264 (41%), Gaps = 13/264 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + + ++ L++ + ++ DY+L + ++A VS +++ + A+ LGY+G Sbjct: 20 LIALLEKKRNHLSKIENQVLDYILTHMTEISSQTIYEVAQALFVSTATISRTAKHLGYRG 79 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK A+ +++ S+ + + + ++ A + + E K+ Sbjct: 80 FQELKYAIVQSVQSEST-------------ESDSRSFQAITQQLIANVQDSFQQMDEAKV 126 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 E + M+ A I + G+G S + +FA KL +G A A D A V+ DL Sbjct: 127 AEMLKMIERANTIEVFGVGGSFPICTDFARKLTFLGKKAYARSDWDEQAAAVKNLDGQDL 186 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + +SYTG + + A ++++ + L++ ++ L+ + + Sbjct: 187 AIFVSYTGETKGILAYARVAQEQQVPMISLISTKGSTLEKLSTTTLFAKGTTRYHQRVDL 246 Query: 243 SACHAQGMLTDLLFIALIQQDLEL 266 S+ A L D + + + Sbjct: 247 SSRIAVICLFDTVLLMYAEAKQPR 270 >UniRef50_C9Q9L7 Helix-turn-helix protein RpiR n=6 Tax=Vibrio RepID=C9Q9L7_9VIBR Length = 281 Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats. Identities = 65/261 (24%), Positives = 124/261 (47%), Gaps = 1/261 (0%) Query: 1 MN-GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M+ + +++ Q+++KL+ ++ + LS+ ++ G+S SSV+++A+ LG Sbjct: 1 MDKLINKVKTLVHSSNQNEQKLSQLIVERQFDLSELSATKVGALLGISDSSVIRYAKSLG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 GFP LKL L+ + ++ I D + EK + + ++ + Sbjct: 61 CSGFPDLKLKLAAQAPQVMARTAQSVYASIETGDSTAQIIEKAKHLFVSTIEQSIGLMDA 120 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E + +C L A +I L GIGAS +VA + KL++ GFN +D H + Sbjct: 121 ESVEQCAQQLLKANKIALAGIGASAIVAADINHKLIRAGFNVQFNQDYHIQIVQASLLKA 180 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD+LL +S G +E+ A + + G +V+A+T + + + Q A + + E+ + Sbjct: 181 DDVLLVVSARGNTQEVLTAIERAQQNGAQVIALTRYGRDKVAQLADYVIPYSYTEEHSQL 240 Query: 240 ASISACHAQGMLTDLLFIALI 260 ++ Q D++F LI Sbjct: 241 GMVTPQLLQMAAFDIVFFKLI 261 >UniRef50_C1B8E5 Putative RpiR family transcriptional regulator n=1 Tax=Rhodococcus opacus B4 RepID=C1B8E5_RHOOB Length = 289 Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats. Identities = 61/275 (22%), Positives = 107/275 (38%), Gaps = 4/275 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L IR LA S++++AD + +P S+ +A AG S ++V++ Q LG+KGF Sbjct: 14 LSAIRAVAPKLAPSERRVADVCVERPQDVAWWSAADVAEHAGTSTATVIRACQNLGFKGF 73 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 +++ L L + P +D + + + L E+ Sbjct: 74 QHVRMLLLRDLGAADTEPVGTPP----AEDKGAALVRAVFSGLATDLAGALAPLDEDAFE 129 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 VT L A R+++ G G SG A A + + G +A A D T + D+ Sbjct: 130 RAVTALAEAERVLVVGNGGSGPSAATLAVRFILNGRHAEAPTDAVIQQLTAGRLTSRDVC 189 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 LA+S +G+ + G V+ +T + + L +++ L S Sbjct: 190 LAVSDSGLNSVTLRPVEAARAAGATVIGVTSYARSTLVEKSDIGLVIGGGTGPWGGLGAS 249 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 A Q L IA+ + + A + +V Sbjct: 250 ATVVQIAFLISLQIAVSRARGDAAEAAAETFKQIV 284 >UniRef50_A4XR90 Transcriptional regulator, RpiR family n=2 Tax=Pseudomonas RepID=A4XR90_PSEMY Length = 309 Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats. Identities = 63/282 (22%), Positives = 114/282 (40%), Gaps = 8/282 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L ++ + L S +K+AD++L P A L+ ++LA S ++V + A+ + +G Sbjct: 16 ILRKLAEVAPQLQPSLRKVADFILRHPLKAATLTIEELAQATHTSPAAVNRLAKAMELRG 75 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + +LK L L + D + E+ ++ ++ + A + N Sbjct: 76 YISLKAELVATLQDMVSPVDKLRDELAQRPDGAFGLHEQ-LQIASSNLGAAASNNDAAVF 134 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD---MHALLATVQASSP 179 + L ARRI + G G S +A A L+ +A A+ + A + Sbjct: 135 EAVIGRLLGARRIYILGFGNSAYMAGLAAANLVPFCDDATAISMEGGNENAAYRLAAITE 194 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+LL IS + A G VLAIT + L + A + L+ AE Sbjct: 195 RDVLLTISLPRYSLDTLQLARFARERGACVLAITDSPASPLVEIAEYSLFAPAEHPVL-- 252 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 IS+ A L + L ++ ++ E +E+++ L Sbjct: 253 --ISSNAAVLALIEALVAGVMARNKEAVSLAQELTESVMAYL 292 >UniRef50_C0Q155 Protein rpiR n=2 Tax=Salmonella enterica RepID=C0Q155_SALPC Length = 293 Score = 163 bits (414), Expect = 4e-39, Method: Composition-based stats. Identities = 53/270 (19%), Positives = 115/270 (42%), Gaps = 5/270 (1%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 L + ++ +A ++ P T ++S +A+ VS SS+ K ++KLG+ GF LKL++S Sbjct: 19 PELGKKERAIARFIHDNPQTLSNMSITDIAHYLKVSVSSITKVSKKLGFTGFHDLKLSIS 78 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 + + + ++ +P+ + + + E + + A+ LNV + + Sbjct: 79 KNINNNEDTVDIPVIP--DSEGFIEKIFESTLLNSILALQEALNVIDCSIIKSVAWLFIH 136 Query: 132 AR---RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 +I + G G S + +F KL+KIG + D H L + D+LLA+S+ Sbjct: 137 KNAEAKIFIAGCGGSASICDDFNHKLLKIGIFSTVFSDSHKQLMSASLMRQGDILLAVSH 196 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 +G ++ + G + + +T + + L H + + + + + Sbjct: 197 SGQTSDIIQMVNIANERGAETICLTNYPNSPLSLICRHSIISAVKNNPITGENATTRIVH 256 Query: 249 GMLTDLLFIALIQQDLELAPERIRHSEALV 278 + D +F + + E+ + + V Sbjct: 257 LNILDAIFTIIASKTSEITKNSLLSTRNAV 286 >UniRef50_C0C1I3 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C1I3_9CLOT Length = 288 Score = 163 bits (414), Expect = 4e-39, Method: Composition-based stats. Identities = 63/280 (22%), Positives = 123/280 (43%), Gaps = 2/280 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSS-QQLANEAGVSQSSVVKFAQKLGY 60 I Y L +++K ADY+LL P A S + A AG S+++ V+ AQKLGY Sbjct: 7 KVKAEITAIYDTLRGAERKAADYVLLHPQEAALHSIITESAGRAGCSEATFVRLAQKLGY 66 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ LK L A A+ ++ + I + + V + A+ TL++ + Sbjct: 67 NGYAQLKQMLLPAEAAFEPE-TLLPYGDIGRGEDSQAVLCSVFHAAARALDDTLDLLDRK 125 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 E ++ + A +I+ G G + A + K +IG A D + Sbjct: 126 VYEESLSYITRAGKILSAGAGDAYTAAYSAYLKFSRIGLRAVCPADFDVQIMEASGMKRG 185 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+LL IS++G R L A+ +++ +T + + L + + + T A + + Sbjct: 186 DVLLLISHSGSTRTLCQVAETAKAKKARIITVTNYPLSPLAKLSDCVIRTAAFTKNPCNE 245 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +++ + + + L+I+++Q E + + + ++K Sbjct: 246 TVAKRIPELCIIEALYISILQGREEKYAKMLAAANEELRK 285 >UniRef50_D2AU61 Putative transcriptional regulator, RpiR family n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AU61_STRRD Length = 334 Score = 163 bits (413), Expect = 5e-39, Method: Composition-based stats. Identities = 57/281 (20%), Positives = 114/281 (40%), Gaps = 11/281 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + R+R+ G + ++ +A LL TA ++ +LA AGVS +VV+F +LG+ Sbjct: 55 SVAERVRRSLDGSSPGERLVARTLLASYPTAGLETAARLAERAGVSAPTVVRFVARLGFA 114 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIR--GDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ A + AL + + ++ SP D LR+ + + + + S+ Sbjct: 115 GYRAFQQALRDEIEARRASPLTLAQQLGDGVTPDSLRVSAGAIFR---QRLDESFAALSD 171 Query: 120 EKLHECVTMLRS-ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQAS 177 +L + +L ARRI + G S ++A+ L + + +L A Sbjct: 172 PELEAVLDLLADPARRIAMIGGRFSHILAEYLDLHLRLLRPGTRVLDPRPESLAAFSVDV 231 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 D+++ Y +R++ A + G KV+ T + + A + E + Sbjct: 232 GRRDVIVVFDYRRYQRDVVEFARRVHERGAKVVLFTDPWLSPASEAADLVIPVRVEAPS- 290 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + L + + ++ + + ER+R E +V Sbjct: 291 ---PFDSLVPALALVETVVAGVMARLGKEGEERLRQCEEIV 328 >UniRef50_D1BBP1 Transcriptional regulator n=2 Tax=Micrococcineae RepID=D1BBP1_SANKS Length = 290 Score = 163 bits (413), Expect = 6e-39, Method: Composition-based stats. Identities = 59/275 (21%), Positives = 115/275 (41%), Gaps = 9/275 (3%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 RI L +++++ D +L A ++Q++A+ AGV++SSV++ Q+LGY+G+P Sbjct: 19 RIATVRNTLQPTERRVVDLVLDDVAGAVEATAQEIADRAGVARSSVIRTCQRLGYRGYPQ 78 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 L++AL+ LAS E D ++ A + +V ++++ Sbjct: 79 LRVALARELASGAEPS--------THPDTAVGRVRTHVESLAATLPQITSVLDDDQVERA 130 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 VT+ A R+++TG G S +A + A +L +G V D + DL L Sbjct: 131 VTLCVGAGRVLVTGNGLSSPLAADLALRLTAVGRPTECVADPIGQQIAAAQLTSADLCLV 190 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA-SISA 244 +S +G A G V+ +T F + L A L + + ++ Sbjct: 191 VSGSGASESSLRVARAGRAAGVTVVVLTSFVESPLTALADVALVVGPAAGSFRAELEHTS 250 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ + L + + E + + ++ Sbjct: 251 RVPHAIVLEALVEVVADRLGERSRQVRSRVLDVLS 285 >UniRef50_A0YBK7 Transcriptional regulator n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YBK7_9GAMM Length = 271 Score = 163 bits (412), Expect = 7e-39, Method: Composition-based stats. Identities = 62/272 (22%), Positives = 115/272 (42%), Gaps = 6/272 (2%) Query: 10 RYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLA 69 L++++ +A +L PD A + ++ LA A VS + +F + LG FP K+ Sbjct: 1 MLPSLSKAESSIARAILADPDAAVNSTTADLARIAAVSDPMISRFCRTLGCSSFPDFKVR 60 Query: 70 LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTML 129 L+++L S+ I + D L EK I N AA+ + + + V L Sbjct: 61 LAKSLVSKASF----ISEAVSKGDDAALYIEKRINANQAALEYIRSKLKPAIIEQTVAAL 116 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYT 189 ++RI + G+G + +A++ KL ++G A D A+ + ++L IS+T Sbjct: 117 GRSKRIEIFGMGGAAAIAKDAQHKLFRLGIPTVAYEDHLMQRMAAAAADENTVVLVISFT 176 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE-EQATNSASISACHAQ 248 G R + AD ++AIT + L + A + + E E T ++ Sbjct: 177 GRTRAMIEIADIAKNSQATLIAIT-NPKSPLAKLADITITSGDEIEDTTIYVPMTTRIII 235 Query: 249 GMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + D+L L E+++ + + Sbjct: 236 LTIIDILATGLALTQGPAIDEKLKTIKHSLDN 267 >UniRef50_C0ZE98 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZE98_BREBN Length = 295 Score = 163 bits (412), Expect = 8e-39, Method: Composition-based stats. Identities = 55/281 (19%), Positives = 110/281 (39%), Gaps = 6/281 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RIR++Y L S K + + +P +++++A S+++V++F LGY G Sbjct: 5 VKERIRKQYGKLTASQKIICKIAIEKPSLLAIHTAKKIAEFTNTSEATVIRFCYALGYSG 64 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDD-PLRLVGEKLIKENTAAMYATLNVNSEEK 121 + L+ + ++L + + L ++++ + A + L Sbjct: 65 YTELQEEIKKSLLIGDQRKGPIQKYRDTEVTLDLSNYAHQVMESDIAYLQQGLQQIDYNL 124 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASSPD 180 LH+ V + A RI++ G + A+ L I N + + Sbjct: 125 LHDVVKSIVQANRIVVVGFRWCHIPAKWLFSALNAIKGNTHLYTGAVDNADYFLTERDQE 184 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 L++AIS+ E +G K+LAIT + + Q A H L + Sbjct: 185 WLVIAISFPRHPSETVAMVHSAKELGAKILAITEGEFSPISQVADHLLKITTPQPV---- 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + S + ++L ++ D E +R++H + + KL Sbjct: 241 ATSGMPTLFSMLNVLIKGVMLHDSENVQKRLQHYDEISSKL 281 >UniRef50_C2APV8 Transcriptional regulator n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2APV8_TSUPA Length = 303 Score = 162 bits (411), Expect = 9e-39, Method: Composition-based stats. Identities = 58/282 (20%), Positives = 97/282 (34%), Gaps = 7/282 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M ++ + A +++A +L P+ + + A A V QSS+V+FA LG Sbjct: 23 MELRTVLQAQMDRFAPGQQRIATVILTDPEGTALRTIAETARIAEVHQSSLVRFATGLGL 82 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+PAL E LA Q S +D + + + + T Sbjct: 83 SGYPALVKLCREHLAEQAHLVSRFDRAAAEHEDSELFLAA--VDNDQQNLSRTYARIDSH 140 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASSP 179 + VT L A + + G+ VAQ FA+ L + + M L+ ++ Sbjct: 141 QWSRTVTALAEAPNVHVMGLRKCLGVAQMFAYLLHMVRPGVHQIAPPMGGLVDQLRDLHT 200 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD+ + IS + A R G +A+T + L A Sbjct: 201 DDVFVGISIRRYTADTVNAMRYARRTGLHTIALTDDAASPLAAVADTTFLIDTHGVTI-- 258 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + A L L A+ + EAL+ + Sbjct: 259 --FRSMSAFTSLIQSLSTAVALARGARTRNELAQDEALLDEF 298 >UniRef50_D2PSH8 Transcriptional regulator, RpiR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PSH8_9ACTO Length = 309 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 73/281 (25%), Positives = 125/281 (44%), Gaps = 15/281 (5%) Query: 1 MN---GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQK 57 M+ L R+R GL+ + ++A LL +P A L+ +LA G S +V +F + Sbjct: 1 MDDPGFLTRLRAEQPGLSGALGRIAAALLAEPGEAARLTITELAERTGTSPGTVTRFCRT 60 Query: 58 LGYKGFPALKLALSEALASQ-PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNV 116 L GF LK+AL+E + P S I I D L V + ++ NT A+ T + Sbjct: 61 LRLAGFAELKVALAEEVGRAAPSRWSTDIGRSIEPADELDQVLKVIVGANTQALLDTADQ 120 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA 176 + E + AR I L G+G SG+ A +L +IGF ++H+ L +V Sbjct: 121 LDLGAVDEAARAISDARAIHLFGVGTSGITADELRIRLHRIGFACWVWPELHSALVSVAL 180 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT------ 230 + D+++ IS++G E G + +AIT +AL A L T Sbjct: 181 ADRRDVVIGISHSGQIAETIAVLRAAAARGARTIAITNDATSALAGEAGLVLATAQNGSA 240 Query: 231 -----IAEEQATNSASISACHAQGMLTDLLFIALIQQDLEL 266 ++ + +++ H+Q ++ D+L+ + Q + Sbjct: 241 LTTVPPGGAGSSQADALADRHSQFLVLDVLYTRVAQLNHAR 281 >UniRef50_C5BXN6 Transcriptional regulator, RpiR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5BXN6_BEUC1 Length = 293 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 66/279 (23%), Positives = 122/279 (43%), Gaps = 6/279 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RIR L ++++A +L +P+ S+Q +A+ AGVS+++VV+ AQ+LG+ G Sbjct: 13 VLARIRAHTGELHPGEQRVAHVVLDRPEWTIEASAQDVADAAGVSRATVVRTAQRLGFAG 72 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 +P L++ L+ + + + + A+ L + + + + Sbjct: 73 YPQLRVLLARDVGLSGAWTRTSGE-----PEEPIEIVRAYFHDVARAVDGMLALLAADDV 127 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V +L A ++ G G S +A A +L IG +A A D + + P D+ Sbjct: 128 RRAVDLLAGAATTLVIGNGLSSTLAAEAAMRLNAIGRSAEAPADYVSQSVKARLLRPQDV 187 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA-S 241 L +S TG AA G +++A+T FT + L + AS L + + Sbjct: 188 CLVVSGTGSTTPTLQAARAARSAGAEIVALTAFTGSPLGELASVTLVAGMGATSFRDEIT 247 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + QGML + L A+ ++D A + ++ + Sbjct: 248 TTTRIPQGMLLNALVGAVRRRDPAGAQDAQARLLEVIGE 286 >UniRef50_C0DAS9 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DAS9_9CLOT Length = 290 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 59/259 (22%), Positives = 111/259 (42%), Gaps = 5/259 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 + RI+ +Y L++S K++A+Y+L + H S +A + G S+V +F Q L YKGF Sbjct: 17 IGRIKMQYASLSKSQKRIANYILNHREAVIHHSITTMAQKTGTVPSTVTRFCQALSYKGF 76 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 +K+ + + LAS + + I+ D L++V +KL+ + A+ T+ L Sbjct: 77 SEMKVYMEKNLAS-----PLTMDALIQKTDTLQVVLQKLMNSSQNAIQDTMRTLDARSLT 131 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 E V + +A I+L G + A L++I + AV D D+ Sbjct: 132 EAVDAILAAGNILLFGQSGGYISATYARQLLLRINVLSQAVNDRVDANLAASTLKKGDVA 191 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + +Y+G R + A + IT T + + + A L+ Sbjct: 192 IGFAYSGEARSVIEALTTAKHNKATTIVITANTNSTMAKLADLKLFYSYNIPDDLQYLHL 251 Query: 244 ACHAQGMLTDLLFIALIQQ 262 A + M+ + ++++ Sbjct: 252 ASMCEIMIIGAIQAEILRR 270 >UniRef50_C5EP47 Transcriptional regulator n=2 Tax=Clostridiales RepID=C5EP47_9FIRM Length = 294 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 56/283 (19%), Positives = 118/283 (41%), Gaps = 7/283 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +++++ + +K +A Y+L + +S+ LA+ + S+++VV+ +QKLG G Sbjct: 2 LLEQLKEQL-NFTKHEKDVALYILEHREQIPGMSAGDLASASLTSKATVVRLSQKLGLAG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + LKL L + + ++ I + L A+ T + Sbjct: 61 YQELKLRLVAEINQDNRISQMLANDPITDKSSYADIVSTLPVLYDKAVTRTRLSLDTNSM 120 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + +L+ A I + G G S ++AQ +K +G ++A +++ S + Sbjct: 121 NRINNVLQKAECIDIYGTGISYILAQAATFKFATLGVESSAYESINS-HYLAARSHKKTV 179 Query: 183 LLAISYTGVRRELNLAADEMLRV-GGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 IS+TG R +N A + V+ I G + ++Q + + + Sbjct: 180 SFLISFTGANRTVNSMARYLREATNNHVVGIMGPHSSDIRQWCHEIVEISNRDSLLSLDV 239 Query: 242 ISACHAQGMLTDLLFIALIQQDLEL----APERIRHSEALVKK 280 IS+ A + D+ F L+ + + + E ++H L+ + Sbjct: 240 ISSFTAANYVLDIFFALLLSRRYKEHAKSSIEMLKHMPLLLNQ 282 >UniRef50_C4Z9F6 N-acetylmannosamine kinase n=4 Tax=Clostridiales RepID=C4Z9F6_EUBR3 Length = 310 Score = 162 bits (409), Expect = 1e-38, Method: Composition-based stats. Identities = 56/281 (19%), Positives = 117/281 (41%), Gaps = 8/281 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L RI +Y +++ K LA Y+ D A L++ ++ G+S+S+VV+FA LGYK Sbjct: 7 DLLNRINAKYSTMSKGHKLLATYITDNYDKAVFLTAAKMGETVGISESTVVRFATSLGYK 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P + AL E + ++ S R + E +++ + + TL + Sbjct: 67 GYPDFQKALEELVRNKLNSVQRMEVTYGRI--SQSQILETVLQSDRDKIKTTLEKIDADA 124 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR--DMHALLATVQASSP 179 V + +R+I + GI + +A A+ + + + + L + Sbjct: 125 FDLAVDTILQSRKIYIVGIRSCAPLASFLAFYMNLMFEDVCLLTTNSSSELFEQMVRIGK 184 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD+++ IS+ A + KV+ IT + + +S L ++ + Sbjct: 185 DDVIIGISFPRYSMRTLKALEFANNRSAKVITITDSIHSPMNLYSSCNLIADSDMASI-- 242 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + A + + L +AL + + + + E + + Sbjct: 243 --VDSLVAPLSVINALIVALCMKKQNIVAKTLTELEDIWNE 281 >UniRef50_B9DT48 RpiR family regulatory protein n=1 Tax=Streptococcus uberis 0140J RepID=B9DT48_STRU0 Length = 265 Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 53/266 (19%), Positives = 105/266 (39%), Gaps = 2/266 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L R ++ + +++ + DYL + L+ QLA S +S+++ QK GY Sbjct: 1 MTILSRFAEK-ENFTPTEQLIIDYLQSHQEELESLTIGQLAKGTFSSNASIIRLCQKCGY 59 Query: 61 KGFPALKLALSEALASQPE-SPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 +GF +LAL L S V + + + + L +++ ++ Sbjct: 60 QGFRDFRLALVSELTSSRYLGKIVDFSRPFQIKESSQEMVNSLFSLYKSSIDQVQSLLDI 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 +L E + + R+ L G G L ++F+ KL+KI + + V + Sbjct: 120 PQLEEMAEQIAQSNRLFLFGYGDVKLTLKSFSNKLVKINYFPIMATENEEEHEIVPHITN 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+ L +SY G ++ + R G IT + L + L E+ Sbjct: 180 GDVALFVSYRGKNEKMAQHIVSLRRQGVATFVITANQKSPLLPYSKGYLLIPDLEKEDKI 239 Query: 240 ASISACHAQGMLTDLLFIALIQQDLE 265 + + + L +L++ L ++ + Sbjct: 240 GTFYSQLSFDYLLNLIYTFLYKKHYD 265 >UniRef50_A6LTU2 Transcriptional regulator, RpiR family n=3 Tax=Clostridium RepID=A6LTU2_CLOB8 Length = 281 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 120/282 (42%), Gaps = 6/282 (2%) Query: 1 MN-GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M+ ++ ++ ++++ +K+A Y+L P++ L+ ++LA +GVS ++V +F LG Sbjct: 1 MSEVYQKMAEKIPNMSKAQEKIAKYILAHPNSTPFLTVEKLAKLSGVSIATVTRFVIFLG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 YKG+P ++ Q S + I D + +++ + T+ + Sbjct: 61 YKGYPEFLRD-TQESMQQQVSKAKRIRIDSDSSDSEERDIYNIFEDDVNNIKLTMEDLNI 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 +L + V +L +A+RI + +S ++ + L + N + + + + + Sbjct: 120 YELRKSVNLLLNAKRIYIVARRSSAVLGMFLKYYLDLMFNNVNLIEHIEQIPKQISGVNN 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +D+++ I++ R + R G ++IT + L + L I++ Sbjct: 180 EDVIIGITFEKYARSTVEIFTHLKRKGATTISITDSMLSPLVPYSDITLTAISKGTRF-- 237 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 I + A L + L ++ ++ + + E +K Sbjct: 238 --IESFAAPLSLINALIASIEKEKKDFFNSNVELLEEACRKF 277 >UniRef50_C6JLG4 Predicted protein n=2 Tax=Fusobacterium RepID=C6JLG4_FUSVA Length = 299 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 121/278 (43%), Gaps = 7/278 (2%) Query: 1 MNGLLRI-RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M G+ ++ R+ Y L +++K++A+Y+ ++S +L E VS ++V++F++K+G Sbjct: 12 MTGIAKLYRKNYNNLTKAEKQIAEYICENSKKVIMMTSLELGKELNVSDATVLRFSKKIG 71 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 + + LK L+E L ++ + N + V +K+I + M Sbjct: 72 FSKYNELKEYLAEELEARKSVIDKMLDNWNNDREDNNSV-KKMINADIKNMQKLYMDLDL 130 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASS 178 E++ V +++++++I + G+G+S VA+ W M +G A + + L + + Sbjct: 131 EEIDNAVKLMQTSKKIFVIGVGSSRAVAEMLGWHCMVLGLEAVTISEGGYGLFEKIAHVT 190 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 DD ++ S ++ + + + IT + + AS + + Sbjct: 191 KDDCVIFFSVPKYLKDEVQMMELLHAKKVPSVVITNNLFSKIASYASIFIPVETNNTSF- 249 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 ++ + +++ + L + D + + +E Sbjct: 250 ---FNSFILHAEVCNVILLKLFEGDRNRYFQYFKQNEK 284 >UniRef50_B2TKZ2 RpiR-family transcriptional regulator n=49 Tax=Bacteria RepID=B2TKZ2_CLOBB Length = 301 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 59/279 (21%), Positives = 121/279 (43%), Gaps = 7/279 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I+ ++ L++ K +A+Y+L D A +++ +L GVS+S+VV+FA +LG+ Sbjct: 14 DLMRLIQIKFSRLSKGQKLIAEYILKNYDKAAFMTAARLGTSVGVSESTVVRFANELGFS 73 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L+ AL E + ++ + D + ++K + + ATL ++ Sbjct: 74 GYPKLQKALQELIKNKLTTVQRIELQNDYYSDG--DALKGVLKADMENIRATLEKINQNV 131 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSPD 180 V + A+RI + G+ +S +A+ + L I N V + + + D Sbjct: 132 FENVVQSIFEAKRIYIIGLRSSTALAEFLGFYLNVILQNVRIVSYGISDIFEQMINIGED 191 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++ I + + KV+AIT + L +A + L + + Sbjct: 192 DLVIGIGFPRYAAKTIDVLAFAQDRSAKVVAITDSLLSPLASKADYALIAQSNMASF--- 248 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + + A + + L IA+ ++ + E + K Sbjct: 249 -VDSLVAPLSVINALVIAVGMREKDRISTTFGSLEQIWK 286 >UniRef50_A5KNM9 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KNM9_9FIRM Length = 291 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 54/283 (19%), Positives = 115/283 (40%), Gaps = 7/283 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L ++++ +K +A+Y+L D LS+ +LA + S+++VV+ +QKLG G Sbjct: 2 LLEKLQEHK-NFTAHEKDVAEYILSHLDQISELSAGELAKASYTSKATVVRLSQKLGLNG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK+ L+ + + + + + + + + L A+ T + + Sbjct: 61 FQDLKITLTAEINQKKRIDQLLANEPVTAESTYDDIVKTLPALYDKAVTNTRLSLDKNSM 120 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 +L+ A I + G G S ++AQ+ A+K+ +G +A +++ ++ Sbjct: 121 KRISQVLQKAECIDIYGTGISYILAQSAAFKISTLGLECSAYESINS-HYLAARKHKKNI 179 Query: 183 LLAISYTGVRRELNLAADEMLRV-GGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 IS TG + A + V+ I G L++ + + + Sbjct: 180 AFLISLTGSNHTVICMAKYLREATETYVVGIAGPYHTELKKWCHEIVEIPNRDALLSLDV 239 Query: 242 ISACHAQGMLTDLLFIALIQQDLEL----APERIRHSEALVKK 280 I++ + D+ F L+ + E + E + H L + Sbjct: 240 ITSFSGATYILDIFFALLLSKRYEEHARSSMEMLNHLSLLWDE 282 >UniRef50_B9Y4Q7 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=B9Y4Q7_9FIRM Length = 289 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 116/283 (40%), Gaps = 2/283 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L ++ + + + +++ L D +L P++ +++A+ VS ++ + KLG Sbjct: 1 MNLLKKL-ENLENVTPNERILIDAILKDPESFIAAKPKEIASLTYVSVPTIYRLINKLGL 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G LKL L +AL S+ E P I I D + + L T + TL+++ ++ Sbjct: 60 SGVNDLKLQLQDALRSETEVPVESIDFPISPTDTVNEILLHLKDVYTQTIEDTLSLSDQQ 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + +++ A I + + A+NF +++ +I N + + + Sbjct: 120 VLVDVSALMKQAAFIDVYASAGNLFFARNFQFQMQEINVNVNVPEAEYMQKLSAGNADAR 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN-S 239 L + IS+ G +N + ++ IT N L + A + +Y + E Sbjct: 180 HLSIVISFGGRGGSMNTVCQILSDNHSPIVLITSTQKNPLTRFAQYKIYMSSYENHYQKI 239 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 +S S + D L+ + + R + + + + Sbjct: 240 SSFSTRMTLLYILDTLYSIYFRLQYDELLNRKLTTYEKIHRRL 282 >UniRef50_Q46ZY9 Transcriptional regulator, RpiR family n=74 Tax=Burkholderiales RepID=Q46ZY9_RALEJ Length = 358 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 54/283 (19%), Positives = 105/283 (37%), Gaps = 8/283 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + RI + L + +++A+Y+L P A + + A VS ++ +FA+ LG+ Sbjct: 42 SISERIARSLPALTPAHQRMAEYVLANPFRAATMRIDEFATAVQVSVATANRFARALGFD 101 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P + L + + +++ + A + AT + Sbjct: 102 GYPQFRAELVRGFEATLAPVER-LRSELERPTTAAEAFAASLDNAAANLEATRRALDADA 160 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA---SS 178 V+ + +A R+ + G GASG ++ L +V + S Sbjct: 161 CERAVSAILAAERVYIAGFGASGFLSGLLQHGLEMHCRMVTSVAGAGGASHAARQLFKLS 220 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P DL++AI++ + A G ++LA+T + L A LY A + Sbjct: 221 PADLVIAIAFPRYVSATVVLAQRAKARGARLLALTDGPTSPLAPIADIALYAQAANRL-- 278 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S ++ L + L A+ + +E L+ L Sbjct: 279 --SANSDANVLALIEALCGAVAHRAERPVKAAAEMTEFLLPWL 319 >UniRef50_Q89XK4 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89XK4_BRAJA Length = 318 Score = 160 bits (406), Expect = 3e-38, Method: Composition-based stats. Identities = 57/246 (23%), Positives = 106/246 (43%), Gaps = 4/246 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + IRQ L+ S++++A LL + A H S+ +LA A VS+ +V +F++ +G + Sbjct: 30 DIISVIRQSAPSLSPSEQRVAMALLADVEFAIHASNAELARSARVSEPTVTRFSRSVGCR 89 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G LK+ L++A+A +P H + D + + +E A+ A +E Sbjct: 90 GVRDLKVRLAQAMAVGRIYVELPPH--VGTDLARPALWRSVFQEIRRAIAAAEEGLRKED 147 Query: 122 LHECVTMLRSARRIILTGI-GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + ++ G+ G S L A + ++G + D + + Sbjct: 148 IERAAEAISRCSKLAAFGVGGGSTLAAMEVQNRFFRLGIAVSHTSDPSLMRMIAATLGEE 207 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++AIS TG E+ AA + G V+AIT + L A L E Sbjct: 208 DVVVAISTTGAASEVIEAAGIAKQYGALVVAIT-RPQSRLASIADIALGVHVPEAPDALK 266 Query: 241 SISACH 246 ++ + Sbjct: 267 PTASRY 272 >UniRef50_UPI0001BC5E7D RpiR family transcriptional regulator n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=UPI0001BC5E7D Length = 284 Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats. Identities = 55/284 (19%), Positives = 118/284 (41%), Gaps = 8/284 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + L DK + DY+L TA L+S ++A VS SSVV+ ++K+G+ Sbjct: 1 MKTTIENSSYKSDLTNKDKIILDYILRNKKTACFLTSNEIAELLNVSPSSVVRLSKKIGF 60 Query: 61 KGFPALKLALSEALASQPE--SPSVPIHNQIRGDDPLRLV--GEKLIKENTAAMYATLNV 116 + F A K AL +A Q + + +I D L + + + + A ++ Sbjct: 61 ENFSAFKKALQMEIAEQEPSLDANEIPYEKIEQYDKLSDIELIKAFRQNVLKNITADISS 120 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA 176 ++K E ++ A+R+ + G A +A F L I + + + ++ + Sbjct: 121 KEDKKFIESADIISKAKRVFIVGYRACAGLASTFGIMLSCIRPDVFVLNNNGPIVDRLID 180 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 +D+++AIS+ A G K+++ T F + + Q + E + Sbjct: 181 LGKNDVVVAISFNRYSGNTKFAVQIARDAGAKIISFTDFYTSPIAQGVDKVIINSVENFS 240 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ + M + + + ++++ +R+ E +++ Sbjct: 241 F----YNSYASSMMNIETIVALVSKKNMAANKKRLMKMETYLEQ 280 >UniRef50_B9DUA5 Putative transcriptional regulator n=1 Tax=Streptococcus uberis 0140J RepID=B9DUA5_STRU0 Length = 290 Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 110/278 (39%), Gaps = 4/278 (1%) Query: 6 RIRQRYQG--LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 I++ + + ++ ++L + + LS Q +A + S++V+ A+KLG+KG+ Sbjct: 2 LIKEELETYPFSPAEAVTVAFILREVEVLESLSIQAIAKKTYTQPSTLVRIAKKLGFKGW 61 Query: 64 PALKLA-LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 K A L+E V + D + +K+ A + +++ ++L Sbjct: 62 VDFKKAYLAEHDYLTRSFTKVDSNIPFSALDNPMSIAKKIGILEKATIDDLISLLHYDQL 121 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + +L A I + A+ ++A++FA K+ +IG + P+ + Sbjct: 122 SKAKKLLSQAEMIYIFAQSANIILAEDFALKMRRIGKTVHIATTLGEERYVAHNMMPNAI 181 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN-SAS 241 + IS +G + + + K + IT N L Q L E+ + + Sbjct: 182 AIFISTSGETQPILDIVSIAKKAKIKTIGITSIGNNQLSQEVDLFLPMTTREKLFSKIGN 241 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + + +L D+L+ + E ++ S + Sbjct: 242 FTTNISVHVLLDILYSLTFSSQYDFHLEHLKESGQKID 279 >UniRef50_A4WSY4 Transcriptional regulator, RpiR family n=19 Tax=Alphaproteobacteria RepID=A4WSY4_RHOS5 Length = 299 Score = 160 bits (405), Expect = 5e-38, Method: Composition-based stats. Identities = 57/280 (20%), Positives = 101/280 (36%), Gaps = 7/280 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +R L +++++LA ++L Q A S LA A VS +VV+ QKLG+KG Sbjct: 17 IEELMRSALPDLTRAERQLATHILRQYPVAALGSITALAKAADVSTPTVVRLVQKLGFKG 76 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 +P + L + + SP G + + A + ATL + Sbjct: 77 YPDFQAGLRGEVEAMLMSPLAKHERWAGGVPDTH-ILNRFADAVVANLEATLGQIDHAEF 135 Query: 123 HECVTMLRS-ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASSPD 180 +L RR+ + G + +A F + + DM + Sbjct: 136 DAAARLLADPGRRVFVLGGRITHALADYFVTMMKVTRPEVMLMSDMSSTWPPALLDMGKG 195 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+LL + A+ + G +V+ +T + A H E + Sbjct: 196 DILLLFDIRRYENTVLQVAEMAVEQGVEVVLMTDRWISPAAVHARHTFSCQIEVPS---- 251 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + A +L + L A+ E ER++ E L + Sbjct: 252 AWDSTVAMLVLLETLISAVQSLTWEQTEERMKRLEELYAR 291 >UniRef50_Q0KEK8 Transcriptional regulator, GlvR-family n=57 Tax=Burkholderiaceae RepID=Q0KEK8_RALEH Length = 302 Score = 160 bits (405), Expect = 5e-38, Method: Composition-based stats. Identities = 51/274 (18%), Positives = 106/274 (38%), Gaps = 7/274 (2%) Query: 8 RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALK 67 R + L+ + A YLL P LS +++A AGV +++V+ +Q LG++G+ L+ Sbjct: 25 RSNFPTLSTQFQGGARYLLDHPQDVPVLSMRKIAASAGVQPATLVRLSQHLGFEGWQGLR 84 Query: 68 LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 +AL + + +R + +++ + +E+ L + Sbjct: 85 ELFVDALRGGSQPYARRARKVVRE-SSSSRMLGEILDAQHHNLDMIAAN-NEKTLQQAAE 142 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASSPDDLLLAI 186 +L A + + G + +A F + + D L ++ +P D +L + Sbjct: 143 LLSHAACVHVAGFRSCFPIAFTFHYVYRLFRSTVHLIRADAGTLEMELRGLAPKDAVLVV 202 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S+ +E A G KV+A+T T + A L E + + Sbjct: 203 SFAPYSQESIRVAAAARECGCKVIALTDSTVAPIALAADCTLLFSVESPSF----FPSVT 258 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A + + L L+ + + A + +E + + Sbjct: 259 AGVAVVEALVEQLLARKGKGAIRALEQAEGELHR 292 >UniRef50_A6DTP0 Putative transcriptional regulator, rpiR family protein (Fragment) n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DTP0_9BACT Length = 262 Score = 160 bits (405), Expect = 5e-38, Method: Composition-based stats. Identities = 56/254 (22%), Positives = 109/254 (42%), Gaps = 6/254 (2%) Query: 27 LQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIH 86 + A + S +A +AGVS++SV +F++ +G K P LK AL + A + Sbjct: 1 SDLEWAGNASIHDMAAKAGVSEASVTRFSRSVGCKNVPDLKKALVSSFAIGQRFLEGHMD 60 Query: 87 NQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGA-SGL 145 + V + + A+ S++K+ + +++ R+++ G G S + Sbjct: 61 PITEESGAIGQVVKGI----IEALNTVNTQTSQQKIEQTASLVNELERVVVFGSGGGSTV 116 Query: 146 VAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRV 205 +A + ++ + G N + D + D L+L IS TG E+N +A + Sbjct: 117 IADDAVNRMFRFGVNITSYGDFLMQRMVAATLNEDSLVLVISTTGQIAEINESAQIAKQY 176 Query: 206 GGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLE 265 G KV+AIT + L Q A L +E + ++ +A + D + + L + Sbjct: 177 GAKVVAIT-RGDSPLAQLADIHLEVHIQEDEGIYKATASRYALLAVIDAIALELAVLRKD 235 Query: 266 LAPERIRHSEALVK 279 + E +R + + Sbjct: 236 SSKETLRRIKYNLD 249 >UniRef50_C8P486 Transcription regulator n=1 Tax=Lactobacillus antri DSM 16041 RepID=C8P486_9LACO Length = 277 Score = 160 bits (405), Expect = 5e-38, Method: Composition-based stats. Identities = 60/287 (20%), Positives = 128/287 (44%), Gaps = 19/287 (6%) Query: 1 MN--GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 M+ L I+ L + +KK+ +L +P+ + ++ +LA +A V +++ +FA+ + Sbjct: 1 MSEEFLKSIKLISADLTRQEKKIVRVVLNEPEAVQAMTILELAKKARVGTATISRFAKHV 60 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 G F K L + + +++I ++ T ++ S Sbjct: 61 GCVDFADFKSYL------------TTSNLIQAKRLSESSILDEVISYYKQSLAETKSLIS 108 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 +L + ++R A ++ + G+G+ G AQ +LM++G N+ A+ D + S Sbjct: 109 LNQLKKITRLIRKANKVYILGVGSFGYNAQELNQRLMRMGINSCAICDSSMMSIIDTIIS 168 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P D +LA S +G E+ A + G + +IT F+ + L +R+++ L E++ N Sbjct: 169 PKDTILAFSVSGNTIEVCDAVQKCREKGVVITSITAFSNSVLAKRSNNILLIKNTEKSPN 228 Query: 239 SASISACHAQGMLTDLLFIALIQ-----QDLELAPERIRHSEALVKK 280 +++ + DLL L++ +++ E + + KK Sbjct: 229 YNFMNSQFTINYVIDLLTEILLEHPTYLKNMNKTIEEVLRIKEANKK 275 >UniRef50_A8F3C1 Transcriptional regulator, RpiR family n=7 Tax=Thermotogaceae RepID=A8F3C1_THELT Length = 275 Score = 160 bits (405), Expect = 5e-38, Method: Composition-based stats. Identities = 49/277 (17%), Positives = 116/277 (41%), Gaps = 12/277 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + + L+ S+KK+A Y+L +PD H S + A VS++++ + +K+ +KG Sbjct: 2 IFDYLLGIFDRLSDSEKKVAMYILERPDDVIHYSITEFARVVDVSETTIYRVIKKMKFKG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + A K+ L + P + + ++ + E++ ++ L Sbjct: 62 YQAFKIELIRQTSGVKSVPLTNMETLDEYVEEIKSLAERM-----------KTTLKKDDL 110 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + +++ I G+G S +VA+ + L +GF++ D H + DL Sbjct: 111 QKAADWIVQSQKTIFFGVGLSSVVAEYGSLLLSLLGFSSFCYNDPHVQVIVATGLCKKDL 170 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++++S++G R+ + VG + +A+T + L LY+ + + Sbjct: 171 VISVSHSGNIRDTVKSTQVARDVGARTVAVTAGINSPLSSVVDIALYSPVA-RFEKYEFL 229 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + + ++LF ++++ + ++K Sbjct: 230 RGNLGEMAVLEILFKMVLKKIYGEKESHLNDLSEVLK 266 >UniRef50_D1AP79 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AP79_SEBTE Length = 261 Score = 160 bits (404), Expect = 7e-38, Method: Composition-based stats. Identities = 58/266 (21%), Positives = 117/266 (43%), Gaps = 18/266 (6%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M IR +Y+ L +++K++ Y++ + R L + LA+ S +++V+ ++K+G+ Sbjct: 1 MKIENLIRDKYKNLNETEKEILRYIISNSNKIRGLRIKDLADAVFCSPNTIVRMSKKMGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF +K + E L I D + + + T + + E Sbjct: 61 TGFSEMKHVIFEELEKN------FSQVPISEDGLYKDLLK------------TKELINSE 102 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L ++ + I + G+G S L A F+ +L +G A + D HA+L + Sbjct: 103 LLDYLAALIVKKKNISIFGLGPSRLSADIFSMRLTFLGIAAISFIDQHAMLFYANKIKEN 162 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ L IS++G ++ + A G ++++TG + N L + A H ++ + A Sbjct: 163 DICLFISFSGEQKGILGPAVIAKGRKGVIISLTGLSDNELSRIADHSMFFKTTSMYYDGA 222 Query: 241 SISACHAQGMLTDLLFIALIQQDLEL 266 I++ M+ D LF ++ + Sbjct: 223 DITSRVPADMVLDYLFSKMVLIMKDE 248 >UniRef50_C6JEA0 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEA0_9FIRM Length = 291 Score = 160 bits (404), Expect = 7e-38, Method: Composition-based stats. Identities = 52/282 (18%), Positives = 121/282 (42%), Gaps = 11/282 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ I ++ L+ +K+A+Y+L D + + +L+ + VS+++V++FA LG+ Sbjct: 15 MSLDQLIYEKIPSLSAGQRKVAEYILNNKDEFSYATLAKLSKDISVSETTVIRFAYSLGF 74 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F A++ L E + S P+ + +K+ T A+ ++ +EE Sbjct: 75 DSFSAMQQKLREEILSVPQRNVEGQIQN-------QTFYQKVFSRETQALQDWISHINEE 127 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLAT-VQASSP 179 L + V L +A I++TG +S A F +L + N +++ + + + Sbjct: 128 LLDKTVEALLNADHILVTGARSSYHAANWFGNRLNLLLGNTHIIQEFYDPRFDLLNHITD 187 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 ++++I++ + AD ++G +++IT + + + + +S Sbjct: 188 KTVVISIAFARYTKWTYRYADSAKKMGATLVSITDSVSSPFFNISHYTILAA---PVKDS 244 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+ L D + + + ++ ER++ E + Sbjct: 245 MGFSSPICMYCLFDAIISKIHDERKDMIVERLKQYEDTYRDF 286 >UniRef50_C9RVZ8 Transcriptional regulator, RpiR family n=5 Tax=Bacillaceae RepID=C9RVZ8_GEOSY Length = 255 Score = 160 bits (404), Expect = 7e-38, Method: Composition-based stats. Identities = 38/260 (14%), Positives = 91/260 (35%), Gaps = 19/260 (7%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 ++ ++ D + DY++ P ++ ++LA VS +V++F +K+G +GF K Sbjct: 5 EQIAQFSELDYAIYDYVMKHPHEVAYMRIRELAEAVHVSPPTVLRFCKKVGCEGFSEFKT 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L + + + ++ + TL + E + + Sbjct: 65 KWKLYLRETKRTAII----------SSQEALKEFFER-------TLTADYERTILDAAAA 107 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + A +I G G+SG++A+ + + ++D + + ++A+S Sbjct: 108 IARADHVIFVGSGSSGILAEYGSRYFSAFQKFSVYIKDPFFPIY--GHYFHNCAVIALSV 165 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 +G G +++IT L + + L A + ++ Sbjct: 166 SGETSYTLAQVHRFKENGSTIISITNRKHCTLANISDYNLTYYATPERIGQTDVTTQLPV 225 Query: 249 GMLTDLLFIALIQQDLELAP 268 L + L + + Sbjct: 226 VYLLERLAKEMYRLLGRKTE 245 >UniRef50_A9BVS1 Transcriptional regulator, RpiR family n=4 Tax=cellular organisms RepID=A9BVS1_DELAS Length = 292 Score = 159 bits (403), Expect = 8e-38, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 111/277 (40%), Gaps = 6/277 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ IRQR+ L+ + +++A ++L P+ S + + AG +++V+FAQ LG+ Sbjct: 1 MSVQDDIRQRFAELSPALQQVARFVLEHPNDVVTASMRSVGTRAGSPPATLVRFAQWLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+P LK A ++ + + + G + + + + + +T + Sbjct: 61 DGWPQLKQAFAQDMGLGSDEAYGQRAKALVGRAGDHDLVGETFEVHRRNLESTERRL-GD 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASSP 179 L + +L AR + + G AS VA +F + + + + L +A Sbjct: 120 ALQQACALLEKARSVHVAGFRASYPVAFSFVYVYRLLRASVHLLDGQGGTLEMQCRAMER 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D LL +++ RE G +++A+T + L A L + Sbjct: 180 GDALLVVAFAPYSREALAVTQAARDAGCRIVALTDSPASPLALLADATLLFSLHSPSF-- 237 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + + L++ L L + + +RI +E Sbjct: 238 --FPSITSAVALSEALVELLASRAGKGVVQRIGQAEE 272 >UniRef50_B9R568 SIS domain protein n=2 Tax=Labrenzia RepID=B9R568_9RHOB Length = 289 Score = 159 bits (403), Expect = 9e-38, Method: Composition-based stats. Identities = 60/277 (21%), Positives = 109/277 (39%), Gaps = 11/277 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L IR R ++KK A L+ + + A AGVS ++++F +LG+ G Sbjct: 5 LLDDIRDRLDEFTATEKKAAHALMANYPVQGLGTVAEFAKAAGVSAPTILRFVARLGFPG 64 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F + L LA+Q SP + + VG+ + T + + +L Sbjct: 65 FAEFQKKLRSELANQLNSPLARSTSLAKDTTGDPHVGQ-----LIENIRETFDHLPKGEL 119 Query: 123 HECVTMLRSARRI-ILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSPD 180 V +L R+ L G + +A+ A L + N V H L + P Sbjct: 120 DGLVKLLADDRKTVHLIGGRFTDGLARYMAAHLRIVRPNVVHVAGQHGNWLDQLLGIGPK 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D++L + E+ A+ + G V +T + + + AS+ L + Sbjct: 180 DVVLVFDIRRYQAEIIQFAEAAAKQGATVALVTDSWMSPIGRIASYVLPARVAVPS---- 235 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + A + ++L + +++ + A ER+R EAL Sbjct: 236 PWDSSLALMAIAEVLIAGVTRENQDKAEERMRALEAL 272 >UniRef50_B7GSI0 Transcriptional regulator, RpiR family n=1 Tax=Bifidobacterium longum subsp. infantis ATCC 15697 RepID=B7GSI0_BIFLI Length = 289 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 62/280 (22%), Positives = 104/280 (37%), Gaps = 3/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L RIR L + +K+A + L D L +A E GVS +VV+ LG Sbjct: 12 SILARIRLALDALDPAQRKVARFFLENSDVIGDLPIATVARETGVSAGTVVRTCADLGCH 71 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ +++ ++ A + I+ + + Sbjct: 72 GYREMRILIARDNAIRSLLEQRGHARADGEAGSEGERIIARIRGMLDMLRELPDCLDAGA 131 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + M+R AR I++ G S VA N +L++ G VRD + P D Sbjct: 132 FNRALEMIRDARGIVIVASGLSSGVAANLESRLLRYGRLVTFVRDPLGQDISASLLKPGD 191 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++AIS +G R A + G LA+T F ++L RA+ L N Sbjct: 192 LIIAISGSGENRHTVHAVEVATANGADALAVTSFANSSLATRATTTLVASTPATTFNDEL 251 Query: 242 I-SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 I ++ ++ + L L E P I + + Sbjct: 252 IDTSRLPLDIVIESLTGQLG--RGEEDPGVISQISEHLDR 289 >UniRef50_UPI000196C8C2 hypothetical protein CATMIT_03055 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196C8C2 Length = 277 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 56/278 (20%), Positives = 113/278 (40%), Gaps = 5/278 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 ++ Q L +S+K L DY++ + ++S+ ++ + VS S++ + KL G Sbjct: 1 IYDKLEQL--SLTESEKTLIDYVVEHSEDIMNMSAADISKNSYVSVSTIYRIIDKLELSG 58 Query: 63 FPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 A K + Q E SV + R ++ + K++ +++TLN+ + ++ Sbjct: 59 LQAFKSHIHFDRERYQKELVSVDYNYPFRINNTNHEIMTKMLNLYDQTLHSTLNLVNLDE 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V + A I L + +A+ F +++IG + + + + D Sbjct: 119 FGKIVQKMYDANVIALFPSIGNFFMAECFRQNMLEIGKDVIVEKQIFYQTKVAETLKKGD 178 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA-EEQATNSA 240 L + ISY + M + + I+ + L + + LY + E+ A Sbjct: 179 LAIVISYANRTPHVEDFIRVMNKNQVTTVLISSTKESELSKLVDYHLYFASYEDSEEKIA 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPE-RIRHSEAL 277 S S+ + L D L+ +D E + RI H L Sbjct: 239 SFSSRVSLQFLLDCLYACYFNKDYEKNIDYRIEHYIEL 276 >UniRef50_UPI0000D541FA probable transcriptional regulator n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D541FA Length = 207 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 45/208 (21%), Positives = 102/208 (49%), Gaps = 4/208 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L +I+ L +S++K+ +++L P + + + + ++ G+S+ ++++F + +G+ Sbjct: 4 KLLRQIKNSLSDLRKSEQKVGEFILNDPKSVITMKTAEASSAMGISEPTLIRFCKAIGFT 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ LS+ LA+ + +I DD + + EK+ + + + + ++ Sbjct: 64 GFQDLKINLSQQLAAD----DYFVMYEINEDDSIHELCEKVFDTSISEILNVRSQIDQDI 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + L +A+R+ G S VA + K ++ ++ + D H + + DD Sbjct: 120 LENAIETLVNAKRVEFYAFGGSAPVAMDGQHKFFRLKIPSSYISDPHLQFMSANSLERDD 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKV 209 +++AIS +G L + + + G KV Sbjct: 180 VVVAISQSGTTTALIESVKIVRKNGAKV 207 >UniRef50_B1KTP2 Transcriptional regulator, RpiR family n=10 Tax=Clostridium RepID=B1KTP2_CLOBM Length = 255 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 99/256 (38%), Gaps = 12/256 (4%) Query: 8 RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALK 67 + + L +++K L +Y+ +S + A VS ++V++ +KLG+ GF LK Sbjct: 7 EKILKELTKNEKDLLNYINSNNSKIYKMSINEFAQSTYVSTATVLRLCKKLGFNGFNELK 66 Query: 68 LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 L ++L + + I L+ + T+ + E+L V Sbjct: 67 FNLKKSLTLKNKGYDSSIG------------LNGLLSRRLLELKETMISLNLEQLDSIVD 114 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAIS 187 L S + I + G G + + + L+ + D + T +D+ + S Sbjct: 115 YLCSDKNIHIFGRGLTQMSLEYLYNILISLNRQCMFYLDPPLVYQTASQMDENDVFIIGS 174 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHA 247 + G + A + G V+AIT + L ++A L + + + I++ + Sbjct: 175 FGGSTDPIVKAVEISKENPGTVIAITSNPNSELAKKADIVLIGETQNRFFSGIDINSRLS 234 Query: 248 QGMLTDLLFIALIQQD 263 + +++ + + Sbjct: 235 IQFIVEIIVELYMSRM 250 >UniRef50_C0CJY4 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CJY4_9FIRM Length = 296 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 115/280 (41%), Gaps = 7/280 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + ++ + S K +A+YL+ D + + LA + GVS ++V++F++ LGY+ Sbjct: 17 DFFHKLTDNFDAFTYSQKTVANYLIDNQDNVAFDTLEDLAEKIGVSTTTVIRFSRVLGYQ 76 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ ++ + + ++ P ++ + ++ + + TL++ ++ Sbjct: 77 GYSDMQKDIQNNVRTKAALPDRFDKTNLQIPKN--QLLQQSFTNDLNNIQKTLSLQKDQD 134 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL-ATVQASSPD 180 L + + M+ A+ + + G+ AS +A FA ++ +I N + + V ++ Sbjct: 135 LEQAIQMISDAQNVFVLGMRASFSIAHYFASRIGEIKANVRLISSTGLIYPEEVNSAQKG 194 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ +A + + G K++ IT ++ L Sbjct: 195 DVCVAYMFPRYCKTATTILSWFRSCGVKIILITSQNITSVTNYGDIILPCTVSSVYYK-- 252 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ A LT+ L AL Q E + + +E ++ + Sbjct: 253 --NSYAAPLCLTNFLIAALAQASPEESRAMLERTENILSQ 290 >UniRef50_A3X377 SIS domain protein n=5 Tax=Rhodobacteraceae RepID=A3X377_9RHOB Length = 298 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 47/282 (16%), Positives = 106/282 (37%), Gaps = 7/282 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L R+ + ++ L +K A Y+L P+ + +++A A V ++ V+ A+++G++G Sbjct: 13 VLDRLTEEWEALTPEAQKAARYVLENPNDVGVSTVREIAEAASVKPNTFVRMARQVGFEG 72 Query: 63 FPALKLALSEALASQPESPSVPIH--NQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + + +A+ S IR L + + + + T + E Sbjct: 73 YDDFRAPFRDAIRQGTASFPDRARWLQDIRKSGDLGGLYADMAEAAIRNLEDTFSGIDAE 132 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASSP 179 + + +R++ G+G + A+NF + A+ + + + Sbjct: 133 AMKLAAEAIWGSRQVFTLGVGVNNANARNFTYLASTGMTQFHAIPRPGSTAVDDLAWADN 192 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+L+A+S R E+ A + G ++ ++ + + + A H + Sbjct: 193 RDVLIAMSMRPYRSEVIAALEVAREQGMTIIGLSDSPASPIIRAADHGFVVAVDTPQF-- 250 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + L + L +I E ER+ KL Sbjct: 251 --FPSSVSAIALLETLLSFVIAVASEEIVERVEKFHQRRHKL 290 >UniRef50_UPI0001C42AD8 transcriptional regulator n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42AD8 Length = 281 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 106/281 (37%), Gaps = 7/281 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L I++ L + + +ADY+L L+ LA S +++++ LGY Sbjct: 3 NPLTVIKEHLSKLTNAQRIIADYILKNSSEVAFLTIHDLAQRVNTSSTTIMRLMSNLGYS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + L + + Q + N + I + + + + + Sbjct: 63 GYSEFQKGLQKLIRDQTAPQTRLEINLENV--NKDDLWGNTINHHLYQIQKVMEQMPKSQ 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAA-AVRDMHALLATVQASSPD 180 L E V + S+R++I T + + + Q L + N + D + + + Sbjct: 121 LDEVVKKITSSRQVICTSVRSGLPIGQYLTHGLNRTLGNCRLVIADTSDWVDEIITMKSE 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++A S+ + + G +++AIT + + + A L ++ A +++ Sbjct: 181 DLIIATSFPRYAKRIIDFVKAAKCHGVQIVAITDSYSSPIVEYADIVLPCDSDSLAFHNS 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++ D L A E +R+ ++K + Sbjct: 241 P----IVAMIVADYLINATAIGQSEETRKRLDKINEMLKDM 277 >UniRef50_Q1JDL9 Transcriptional regulator, RpiR family n=21 Tax=Streptococcus RepID=Q1JDL9_STRPB Length = 280 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 45/278 (16%), Positives = 112/278 (40%), Gaps = 13/278 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + +I + + +K +A + + T + L++ ++ +SQ+++ +FA+K G+ G Sbjct: 11 LITKIEASLEHMTSLEKGIAHFFITTDLTPQELTASEIVKRLHISQAALTRFAKKCGFTG 70 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + A +L E+ + ++++ + A + T + +EEKL Sbjct: 71 YRAFAFDYLHSLQESQETFQSIH----------LELTKRVLMDYDALINKTYELVNEEKL 120 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 ++ ++ R+ G G+SGLVA+ + M++G A D + + L Sbjct: 121 LNLAKLIDASERVYFFGKGSSGLVAREMKLRFMRLGLICDAYSDTDGFTWANSLVNENCL 180 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + S +G + A + + G K + +T + + Q + Sbjct: 181 VFGFSLSGKTNSVITALHQASQRGAKTVLLTTDNQTEFDDSLDI-IPVSSTHQLHYGNRV 239 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 S ++ D+++ ++ D + +++ ++ K Sbjct: 240 SPQFPLLIMMDIIYAYVLAIDKPHKEKIFKNT--IIDK 275 >UniRef50_Q2BFK6 Probable glucose kinase n=3 Tax=Firmicutes RepID=Q2BFK6_9BACI Length = 559 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 46/270 (17%), Positives = 107/270 (39%), Gaps = 11/270 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + I L + ++ +A Y++ ++ + + +L+ + VS++++ +F QKL + Sbjct: 300 SITTMIESNKHKLTKREELIAKYIISNVESVPNKTISELSKQINVSEATITRFCQKLEFG 359 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + L+L EA S + + + +K A++ T Sbjct: 360 SYNKLRLMAKEASVSTRLHEQSDMPGLTEVKETYSSMLKKF-----DALHIT------ND 408 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + ++ + ++ L GI VA+ +KL+K+G A A + + +VQ + Sbjct: 409 MEQLNKLVAGSEQVYLYGINEMSHVAEQLKFKLLKLGIRADAFLTPYQMEMSVQTLTRKT 468 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++ ++ TG +E+ + + G K + IT + L + L + +S Sbjct: 469 AVVGLNTTGYAQEVIGMLETAKKAGCKTIGITSQQDSPLAHASDLRLLIPSAGDIAGDSS 528 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERI 271 + L D++ L + + I Sbjct: 529 SIEEVSALYLVDIILKELQAGLKQKERKEI 558 >UniRef50_A1WPP9 Transcriptional regulator, RpiR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WPP9_VEREI Length = 310 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 60/282 (21%), Positives = 114/282 (40%), Gaps = 13/282 (4%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 + R+ Y L +S +++ADY+L S ++LA A VS ++ +FA+ LGY + Sbjct: 16 IQRVAGMYAALPRSQQRIADYVLRHAFDVATASIEELAQAAKVSIATANRFARALGYSSY 75 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 P + L + + E I+ L +I ++ + AT ++++ + Sbjct: 76 PDFRADLLQVFKTALEPVEKLRD--IKPGTRLHDTLLAVIAQSVDNLQATRSMSNADAHE 133 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAV---RDMHALLATVQASSPD 180 V LR + R+ + G G+S +A + A+ L N ++ + + + Sbjct: 134 HFVLALRQSERVYIVGFGSSAFLASSAAYHLGLYCPNVHSIGGEGGAEQAVRRMNQLTAQ 193 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL+ IS+ + + G V A+T + L Q A H LY A + Sbjct: 194 DLVFGISFPRYSADTVRLLHFAQQRGAVVAALTDAPTSPLVQLAQHVLYAKANSALLS-- 251 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 S+ A + + L L Q + + L ++L+ Sbjct: 252 --SSNVAALTVLEALGAMLAQGQ----SNALAQARDLAEQLM 287 >UniRef50_C9M9W1 Transcriptional regulator, RpiR family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M9W1_9BACT Length = 313 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 55/279 (19%), Positives = 116/279 (41%), Gaps = 7/279 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L +R+ + L++S KK+A Y+L P T +++QQLA ++G S+++VV+FA+ +G + Sbjct: 37 KILEELRRSFSTLSRSQKKIATYILENPTTVAFMTAQQLAEQSGTSEATVVRFARAVGLE 96 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GFP LK L + + + + + + +I ++ + Sbjct: 97 GFPNLKSKLQSCVEDRLTAAERLESYR--TIGKKANLVQNVISQDLDKETLPYINIEDSS 154 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + ++ SA ++ L G+ ++ + + L N + ++ + Sbjct: 155 IVALSKVICSAPQVYLIGLRSARALIEYLVAYLSWFLPNIVPLAGDS-FTESLGLADKSS 213 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L+L IS+ + G +IT + L + + + L+ + A Sbjct: 214 LVLGISFPRYTQLTIDCLSFAHDQGFLTASITDSEKSPLAKVSDYHLFVPCS----HLAF 269 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 I + + L + +++ A ER+ H EAL K+ Sbjct: 270 IDSLVLPMCAINALLLQIVECLGGEAQERLLHLEALWKR 308 >UniRef50_B0PG82 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PG82_9FIRM Length = 296 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 51/279 (18%), Positives = 112/279 (40%), Gaps = 5/279 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +++ L +S+K A YL+ L+ ++ E S +++++ + +GY+G Sbjct: 11 LKTKLQLILPSLPRSEKAAATYLVENLHRIGSLNLNTISAETNSSGATIIRLCKHMGYRG 70 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F + ++ A P +R + +I +N ++ TL + S ++ Sbjct: 71 FLDFRNSVRMA----EYPPYDGGDAVPAEHASIRELMCAVIDKNNETVHNTLALIS-DQY 125 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 LR A I + G G + + Q K MK+G + D + + D+ Sbjct: 126 EPAALALREANIITMFGNGDAIIPCQLIGMKFMKVGKACVVLNDQDMQMFCASSIRSGDV 185 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 LA+S+TG + + A G + +T + L + S+ L+T ++ I Sbjct: 186 ALAVSHTGRSKSVVEAMRIAYERGAITIGVTASAKSPLLKHCSYALFTGTVDETDTGDII 245 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S A+ + + L++ + + E + ++ ++ Sbjct: 246 SRRIAEQTILETLYLRAVDDAGKDLEEVKKQGAKVIAQM 284 >UniRef50_C7HVZ9 RpiR family phosphosugar-binding transcriptional regulator n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HVZ9_9FIRM Length = 272 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 48/276 (17%), Positives = 105/276 (38%), Gaps = 18/276 (6%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I Y + +K +ADY + S + + N+ VS+SS+ +F+QK G+KG+ Sbjct: 10 IVDSYDKFTEVEKLIADYFIKNKHK-EDFSIKNIKNKLHVSESSITRFSQKCGFKGYREF 68 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 E S E+++ + ++ E++ Sbjct: 69 IYRYEEGFLKGISKSSFN--------------VEEVLNTYGRILNMFPSLIDNEQIDRIA 114 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 ++ ++ ++ GIG+SGLVA+ +L ++G A+ + + LL+ I Sbjct: 115 DLIIKSKSVLFVGIGSSGLVAREMQSRLTRLGILVMAIDYQDEMRMRAVFQKENSLLIGI 174 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S + + + A + G K + +T + + + E IS Sbjct: 175 SLSANKESVLFALKQAKENGAKTILVTSNSKDKFS-FVDEKVIIPTIEDLRGGNIISPQF 233 Query: 247 AQGMLTDLLFIALIQQDLELAPERI--RHSEALVKK 280 + D + +I+ +LE ++ + + +++ Sbjct: 234 PVLVFMDFCYNKIIKNNLEDDYRKLLHKKTIDALEE 269 >UniRef50_Q9KGC3 BH0181 protein n=3 Tax=Bacillus RepID=Q9KGC3_BACHD Length = 241 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 105/256 (41%), Gaps = 19/256 (7%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 + + + + +Y+ + ++ ++LA+E VS +++++F +K+ GF K+ Sbjct: 5 EVIASFNELEMSIYNYICQHAEKVAYMRIRELADETHVSTATILRFCRKVDCDGFSEFKV 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L L + ++P + I E+ + + E++ E + Sbjct: 65 KLKMHLEKEKKAPIKSSQHAI------AEFFERAFRGDLE-----------ERISEAAAL 107 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + A +I GIG+SG++A+ A +G + ++D + + + +A+S Sbjct: 108 VADAENVIFIGIGSSGILAEYGARYFSALGKLSMYIKDFSYPI--HSKLRQNSVTIALSV 165 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 +G +++ + G K+++IT + + + A L E+ A+I+ Sbjct: 166 SGETHFTITQVNQLKQEGSKIISITNNKFSTIAKVADVNLSYYVSEEFFEKANITTQVPV 225 Query: 249 GMLTDLLFIALIQQDL 264 + + + L + Sbjct: 226 VYILEAMARELYKLQG 241 >UniRef50_B1QUP4 Phosphosugar-binding transcriptional regulator, RpiR family n=2 Tax=Clostridium butyricum RepID=B1QUP4_CLOBU Length = 286 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 54/281 (19%), Positives = 118/281 (41%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN +I + L +++K L +++ + L + + N+ VS+S++ + +KL Sbjct: 1 MNIFFKIDELVD-LTENEKILVEFIKSKRFEFAELEVEDICNQCFVSKSTIYRLCKKLNL 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G LK+A+S + + V I+ + V + L + + +T N+ + Sbjct: 60 IGLSQLKVAVSAGVKDYVQE-QVDYDFPIKSNQTQTEVLDSLKTIYRSTINSTYNLMDLQ 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L+ L+ A I + + A+NF +++ +IG N + + T S Sbjct: 119 ELNYIALQLKKANVIDIYTSAGNIFFAENFKFQMAEIGVNINVPEEEYIQHLTASTSDKS 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN-S 239 + + IS+ G R + + ++ +T N L++ A H LY + E N Sbjct: 179 HVAIVISFGGRGRCTSSIIGLLKEKKTPIILVTSTDDNPLKKYAKHILYMSSFENHFNKI 238 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +S S + + D+++ + D + + + ++K Sbjct: 239 SSFSTRLSLLYILDVIYGCYFKLDYDKNIKYKTDTYKRMRK 279 >UniRef50_A1BAR1 Transcriptional regulator, RpiR family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1BAR1_PARDP Length = 294 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 60/280 (21%), Positives = 108/280 (38%), Gaps = 7/280 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R+ QR+ L +++ LA +L A S LA EAGVS +V++ QKLG++G Sbjct: 11 IEDRLMQRFGTLTPTERLLAGHLTRNFPVAGLASMTYLAKEAGVSTPTVLRLVQKLGFRG 70 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 +P + L + ++ ESP G P + + A + TL+ Sbjct: 71 YPEFQAQLRNEIEARLESPLSKHARWTDGV-PQTHILNRFADAVLANLTRTLSRIDHADF 129 Query: 123 HECVTMLRSARRIILT-GIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSPD 180 C ML +R +L G + +A +L + +A+ + + P Sbjct: 130 DACAEMLADPKRRVLVTGGRITHALADYLVTQLGIVRPGVSALPSQSSTWPSALLEMRPG 189 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L+ A+ G V+ IT + + A E + Sbjct: 190 DVLIVFDIRRYESATLQLAEMAAERGADVVLITDPWISPISAHARFRFAAQIEVPS---- 245 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + A +L + L A+ + + A +R+ EAL ++ Sbjct: 246 AWDSSTALMVLIETLLAAVQELNWPQAQDRMTRLEALYER 285 >UniRef50_A9BZX9 Transcriptional regulator, RpiR family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BZX9_DELAS Length = 325 Score = 157 bits (396), Expect = 5e-37, Method: Composition-based stats. Identities = 59/285 (20%), Positives = 109/285 (38%), Gaps = 11/285 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +R G + + ++ ++ P A LS++++AN G S ++V +FA+ GY+G Sbjct: 19 VQELLRASVDG-SPAVARVGRWMAAHPVLAVTLSAEEVANACGGSLAAVNRFAKHAGYEG 77 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDP---LRLVGEKLIKENTAAMYATLNVNSE 119 F L+L L L E + + +GE+ + + A Sbjct: 78 FADLRLHLGRQLQQALEPVNKLRAAHGPEAATAGAVGTMGEQAFRHTQRNLQAAAQACDP 137 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR---DMHALLATVQA 176 L + + ARR++ G G+S VA A L V + + Sbjct: 138 GLLDQLAQRICRARRVLFMGFGSSHHVAAFGADVLQPYLPQVVEVTSAGGSEQAVRRMTG 197 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 + D+L+AIS RE + G +AIT + + L + A + L A Sbjct: 198 LTEQDVLIAISLPRYSREAVALTAHARQRGALTIAITDESTSPLAREADYTLLAPASHPL 257 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+ + A + + L +I+ + + SE+++ L Sbjct: 258 LPSSPM----AAMAMVEALATQVIRATPQAVRSLVELSESVLPYL 298 >UniRef50_C1TN65 Transcriptional regulator n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TN65_9BACT Length = 279 Score = 157 bits (396), Expect = 5e-37, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 109/280 (38%), Gaps = 11/280 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +I + + + K+A ++L P A +++ Q+A S+SSV++FA LGY G Sbjct: 2 LKEKIIAGMKDFSTTQAKVARFILENPREAPFMTANQMAESVDTSESSVIRFASMLGYSG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 +P LK A+ L Q + + +++ + + + + + + Sbjct: 62 YPELKEAMKSLLLDQMTTIERMAVYDDDPRESP---CHRIMTLDMLDLGESQTNLNPQGI 118 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + A I + +S +A ++ L + + D + + + + Sbjct: 119 RSWASEVLEAPAIYMAAQRSSLALAGYLSFYLSWFHPSVHQLNDT-LIREQMTTAPKGSM 177 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRAS--HCLYTIAEEQATNSA 240 ++ IS+ R A +G + AI+ N + + A H L + Sbjct: 178 MIGISFPRYSRWTVDAMKLGRSLGLTLTAISDSPHNPMTE-ADPEHVLTAPCRHISF--- 233 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 I + A L + L +A+ + + A +R++ E L + Sbjct: 234 -IDSLTAPMSLMNCLIMAVADEMGDEAKKRLQELEELWTE 272 >UniRef50_A6VVN8 Transcriptional regulator, RpiR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VVN8_MARMS Length = 286 Score = 157 bits (396), Expect = 5e-37, Method: Composition-based stats. Identities = 55/265 (20%), Positives = 108/265 (40%), Gaps = 8/265 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 I + Y L++ +++A +LL P+T + LA + V S++V+FA Y G Sbjct: 10 LQQAISRNYDDLSKRLQQVARFLLEHPNTVALETVASLAEQCDVPPSTLVRFAAAFEYNG 69 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDD---PLRLVGEKLIKENTAAMYATLNVNSE 119 F ++ +AL Q S S I + E+ N +M + S+ Sbjct: 70 FSEMQNLFRQALVEQTSSYSERIKLSKSTASTTIDASHILEEFSSSNAFSMNHMNHHFSQ 129 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQ-ASS 178 E L++ V +L +A+ I L G+ + ++ FA+ L + + +L Sbjct: 130 EMLNKAVDLLENAQNIYLIGLRRAFPISSYFAYSLRHLDKTTHLIDGGGGMLIEQASNIR 189 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 +D+++A +++ +E ++ + G +V+AIT + L + C E Sbjct: 190 ENDVIIATAFSPYAKETVNVSEYAFKAGAQVIAITDSKISPLAALSDVCFDIKEAEVL-- 247 Query: 239 SASISACHAQGMLTDLLFIALIQQD 263 + + L L +AL + Sbjct: 248 --GFRSLTSSMTLAQTLLVALAYRL 270 >UniRef50_C1I751 Predicted protein n=3 Tax=Bacteria RepID=C1I751_9CLOT Length = 246 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 47/255 (18%), Positives = 96/255 (37%), Gaps = 16/255 (6%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 + + + L S++K+ Y+ + LA E S++ ++ +QKLG++GF Sbjct: 2 ENLAKLFNKLTNSEQKVFTYIYANQQKVIKMKINDLAKETFTSKTVIINLSQKLGFEGFS 61 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 LK L D V E L + T V + + Sbjct: 62 DLKYYLKSN----------------NSADDDIKVLEDLQYGLKQNIEKTFVVIEADLYKK 105 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 + A+ + + G S L+ +G V+D + L D+L++ Sbjct: 106 ISREVIEAKTVYVFARGTSKAAGYYLNHLLLTLGVKCIFVKDYNLLTLVGNTLESDELVI 165 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 IS +G ++ A+ G + +AIT F N L + + + L+ ++ + T + Sbjct: 166 LISLSGNTEKILEVANIAKVKGSRTIAITSFGNNELSKISDYTLHCVSNDTETKFNDSIS 225 Query: 245 CHAQGMLTDLLFIAL 259 ++ ++L ++ Sbjct: 226 RIGMFIVIEMLVNSI 240 >UniRef50_D2EJX0 Transcriptional regulator n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EJX0_PEDAC Length = 253 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 96/259 (37%), Gaps = 20/259 (7%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 +R Q L Q + + Y+ + + ++ + L+ ++ VS ++V++F +K+GY+GF K Sbjct: 5 ERIQTLNQLEMFVYKYVAGHLEECKTMTIRDLSAKSHVSSTTVLRFLKKMGYEGFSDFKY 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 AL I + + +K+ + Sbjct: 65 ALRHHDKPDRFGQVEQEWGPIAQFLTQANLPKY-----------------RQKISAVAQL 107 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 A + G+G+S +AQ A L G + A+ D + L++ +S Sbjct: 108 FLKAHTRLFLGMGSSSSLAQYGARVLSNYGLFSLAIMDPYQPQPIEGRDYTKTLIMFLSV 167 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 +G + A+ + G +A+T + L + HCL E+ + ++ Sbjct: 168 SGESDAILRQANYYRQNGATTVAVTANHLSTLARVCDHCLAYDIPEKKVGTLDFTSQVPV 227 Query: 249 GMLTDLL---FIALIQQDL 264 + + + L++ + Sbjct: 228 VYVLEQIGQRCGELMKNNK 246 >UniRef50_C7MYE5 Transcriptional regulator n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MYE5_SACVD Length = 310 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 57/280 (20%), Positives = 103/280 (36%), Gaps = 7/280 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 ++ R LA +++A LL P+ S + A AGV QSS+V+FA LG +G Sbjct: 25 LRAELQARMDSLAPGQQRIARLLLSDPEGTAFRSITETARLAGVHQSSLVRFASSLGLRG 84 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 +PAL E L Q V + + +++ + + T + E+ Sbjct: 85 YPALVKLCRERLTEQ--VHLVHRFESAQRHSASGDLLTSVVEHDQQNLARTFARVAPEEW 142 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASSPDD 181 V +L A R+ + G+ VAQ ++ L + + V L+ ++ D Sbjct: 143 ARMVDLLAEAPRVYVMGLRKCLSVAQLMSYLLHMVRPDVRLVAPVSGGLVDELRDLRAGD 202 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS + A + R G +A+T + L A L+ Sbjct: 203 VFVGISIRRYTADTVRAMELAKRRGAHAIALTDDAASPLAAIAELALFVETGGVTL---- 258 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + A L A+ + + + E L+ Sbjct: 259 LRSLSAFVSLVQAAATAVALRIGARSRSELLQDEELLDSF 298 >UniRef50_C6JLR3 Transcription regulator n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JLR3_FUSVA Length = 281 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 109/280 (38%), Gaps = 8/280 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + I+++Y L +S K +AD++ LS ++++ G+S +++++F Q +KG Sbjct: 5 IINIIKEQYGELTKSFKVMADFIFENITQIPFLSIKEISEITGLSSATIIRFTQYFKFKG 64 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 +P + + + + + +P I + + +I +N + N N +E Sbjct: 65 YPEFQKNI-QEILKKEITPMKEFKESILQTGEEETLLDDVILQNIEILKKLPNENLKENF 123 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNA-AAVRDMHALLATVQASSPDD 181 + + ++ ++ +I + +S + F + L + N + + +D Sbjct: 124 KKALEIIENSGKIYIVSSRSSYSLGYYFYFMLKEFKENVEIIISGTEDYTHKLLYLKEND 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L IS+ A + K++ +T + + L + E+ Sbjct: 184 VLFTISFHAYTDFTYKIAQFFKKRNNKIICLTDTLTSPFALISDCALLSKNGEK------ 237 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + + L I L + + E E + + + ++ Sbjct: 238 TYSFVGAMTILNALCIKLAKLNKENTLESLEKLKEIAMEM 277 >UniRef50_C1DL90 Sugar isomerase (SIS) n=48 Tax=Proteobacteria RepID=C1DL90_AZOVD Length = 310 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 50/274 (18%), Positives = 96/274 (35%), Gaps = 11/274 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L I Y+ L + K++A+Y+ Q D +A V S++V+F+Q+ G+KG Sbjct: 24 LLQLITAEYESLPRQLKRIANYMSQQSDRVMVDRVSDIAQHCEVHPSAIVRFSQRFGFKG 83 Query: 63 FPALKLALSEALASQPESPSVPIHN------QIRGDDPLRLVGEKLIKENTAAMYATLNV 116 F ++ EA + + + I + + Sbjct: 84 FSEMQALFREAYTDKATPIQNYQQRIRRMIANRSHKASGGELARECINATRSGLDRLAQE 143 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQ 175 E + + V +L A I + G+ S VA + L + ++ Sbjct: 144 LDEREFDKAVDLLVEADNIYVVGVRRSFAVAHYMVYSLQHTNKRIHLISGLGGGYREQMR 203 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 + DL++A+S++ +E + L IT L ++A+ L Sbjct: 204 SVREGDLVVAVSFSPYGKETQQCVRIARHHKARALVITDSQLAPLAKQANALLLV----N 259 Query: 236 ATNSASISACHAQGMLTDLLFIALIQQDLELAPE 269 ++ + + A L LFIA+ + E Sbjct: 260 EGSTFAFRSLSATLSLCQALFIAVAYRMELKVEE 293 >UniRef50_D0BLW5 Transcriptional regulator, RpiR family n=3 Tax=Granulicatella RepID=D0BLW5_9LACT Length = 268 Score = 155 bits (392), Expect = 1e-36, Method: Composition-based stats. Identities = 78/272 (28%), Positives = 134/272 (49%), Gaps = 7/272 (2%) Query: 10 RYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLA 69 L +DKK+A+Y+ T S LAN GVS SS+ K+ +K+GY + K+ Sbjct: 1 MKDFLTDTDKKIANYIEQNISTVLSSSIHDLANLIGVSSSSISKYIKKIGYASYSRFKVV 60 Query: 70 LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTML 129 L++ A PI Q+ +D ++ + KL T + TL + ++E L V + Sbjct: 61 LAQQNAQ-------PIDAQLDSNDTIKTIQSKLFHTITRSYEMTLELLNDELLETIVQQI 113 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYT 189 SARRI + G+GASG+V + +KL +IG N D H LA++ ++ D ++ ISY+ Sbjct: 114 HSARRIYMFGVGASGMVCNDLYFKLSRIGKNIIYHTDSHIQLASLSGATNQDFIIGISYS 173 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQG 249 +E+ A + L+ITG L +++ L E S++I++ + Sbjct: 174 SNTKEVITAFKIAKELSIPTLSITGIGNQQLDSLSTYQLKIPRHENTIRSSAITSRNDSF 233 Query: 250 MLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 L D+L++AL+Q++ + + S + L Sbjct: 234 FLIDILYLALLQKEEHRHFQNLEKSYRMTHPL 265 >UniRef50_UPI00019039EA RpiR family transcriptional regulator n=2 Tax=Rhizobium etli RepID=UPI00019039EA Length = 290 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 59/276 (21%), Positives = 112/276 (40%), Gaps = 8/276 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RI+ +Y L S++ LAD +L P S+ +L+ VS+++V +F ++LGY+ Sbjct: 11 LEERIQSQYDDLPGSERALADLILEFPGDLLVYSATELSERGRVSKAAVTRFVKRLGYQD 70 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + ++ + EA Q V ++ + G P R ++ ++ + A + T S + L Sbjct: 71 YREMQREVREA---QEAGEPVYLNTGLLGPAPDRTRLQQHLERDIANLRQTFEAVSPDDL 127 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATV-QASSPDD 181 E V +ARR+ + G S A +L+++ + V L ++PDD Sbjct: 128 GEVVRRCLTARRVWVLGFRNSYFFAAYIRRQLIQVRSDVTLVPAAGQTLMEELAGATPDD 187 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++A+ L A + +G + T + A+ + Sbjct: 188 LMIAVGLRRRTSALGRAMKIVRDLGVPIAFFTDRVAVTTPKFATWTFPCQVRGMSL---- 243 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + A L + L ++ E ER+ E L Sbjct: 244 FDSYVAVISLANYLCTEVVAAAGEGGRERLSRIEDL 279 >UniRef50_B9Y9Y3 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y9Y3_9FIRM Length = 252 Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 104/259 (40%), Gaps = 19/259 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ Y L S++ L Y+L P T + ++ ++LA++ GVS++ V+ +QKLG+ Sbjct: 1 MDFYS---NNYDLLTNSERSLLHYILDHPQTIQKMTCRKLADQCGVSKTVVINMSQKLGF 57 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +G+ L+ L E + E T + T+ +N E Sbjct: 58 EGYNDLRFFLKNRAKET----------------GPAASVETVEAEITGNVTKTMQLNKPE 101 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + + +++ + + G S V L+ + + D + L + + + Sbjct: 102 NMRQAAQSIVNSQCVYVISRGTSKAVGNYLEHLLLTLNVKCINIPDYNLLNIIARQMTHE 161 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 ++L+AIS +G + A + G ++ +T F+ + L Q LY + T Sbjct: 162 EVLIAISLSGKTPIIVETAKIVKAYGNALITLTAFSNSPLVQYGDLALYCSSSTTDTKID 221 Query: 241 SISACHAQGMLTDLLFIAL 259 I + DLL + Sbjct: 222 DIVTRIGMFAVVDLLVHYV 240 >UniRef50_Q2SAA1 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SAA1_HAHCH Length = 283 Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 55/274 (20%), Positives = 105/274 (38%), Gaps = 13/274 (4%) Query: 2 NGLLR---IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 N L I +RY L++ K++A +++ P T + +A +A V+ S++++FA Sbjct: 9 NLLELQQAITERYNDLSKRLKQIAQFVMDHPSTVAMETVSVIAEQAEVTPSALIRFAAAF 68 Query: 59 GYKGFPALKLALSEALASQPESPSVPI-----HNQIRGDDPLRLVGEKLIKENTAAMYAT 113 GY GF ++ + L S I G + + + N ++ Sbjct: 69 GYDGFSEMQQLFRQKLVENSTSYRERIRLSSAQPVHSGKVTSHTILNEFVNGNLLSLEHL 128 Query: 114 LNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL-A 172 + S E + + +L +A+ I + G+ S VA + L +I + +L Sbjct: 129 PEMVSGESMDAAIKLLHNAKAIHVLGMRRSFSVASYLTYALRQIKRRVYLIDGSGGMLQE 188 Query: 173 TVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA 232 D+L+AISY+ +E A + G +++IT + L +S Sbjct: 189 QAAFLDKSDVLVAISYSPYAQETRAAVIKAYENGVPIISITDSRLSPLAPISSVYFDVKE 248 Query: 233 EEQATNSASISACHAQGMLTDLLFIALIQQDLEL 266 E + + L L I + Q + Sbjct: 249 SEVR----GFRSLTSSLCLAQALVIGMAYQIEQQ 278 >UniRef50_C3WYI9 Transcription regulator n=6 Tax=Fusobacterium RepID=C3WYI9_9FUSO Length = 282 Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 49/284 (17%), Positives = 123/284 (43%), Gaps = 9/284 (3%) Query: 1 MNGLLRI-RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 MN + ++ ++ Y L +++K++A+++ P LS+ +L E GVS +SV++F++ +G Sbjct: 1 MNEIHKLYKKNYAKLTKTEKRIAEFISKNPKKLITLSALELGKELGVSDASVLRFSKNIG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 + F K ++ L+ + I + K+I + + L Sbjct: 61 FNKFSDFKNYVALELSEGN--LNERIVKNWNNFTSENDLANKIINADLRNIQDFLLNIDF 118 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASS 178 E + + ++ +++I + GIGAS +AQ W + ++G+++ + + L T+ Sbjct: 119 ELIERLIDLIEKSKKIYILGIGASRAIAQFMFWHIKRLGYSSECIIEGGFGLYETISKIK 178 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 ++LL+ ++ + + K + IT + + + N Sbjct: 179 KEELLILFAFPKFLNDEINTLKVIKEKKAKSVVITSSLFSEISFLGDIVFRVPIQ----N 234 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 +A +++ +++ +L +++ + E + +KK + Sbjct: 235 NAFLNSYMVPMEFCNIVLTSLFEKNKDKIYEEWKK-NNNIKKFL 277 >UniRef50_B6G7X7 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G7X7_9ACTN Length = 303 Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 61/276 (22%), Positives = 108/276 (39%), Gaps = 3/276 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ R+ +R S+ ++A + + L+ ++LA A VS SV +F +KLG Sbjct: 1 MDIKRRM-ERASDFTPSELQIARTVSALGPRLQSLTLKELALAAHVSIPSVHRFCKKLGL 59 Query: 61 KGFPALKLALSEALASQP-ESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 +GF LK+ ++++ A E V I+ DD V ++ + T ++ Sbjct: 60 EGFKELKVEMAKSDARHTGERGEVDINFPFAADDTADGVLAQMASVYETTLSDTRDLLDP 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L +L +A I + + AQ F +L+ IG +A + T AS Sbjct: 120 DSLAHAAELLDNALSIDIYTQSHNLYPAQMFCDRLLSIGRHATCFESIERQSRTALASDR 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA-TN 238 L ISY+G+ L+ + + + L S L+ E Sbjct: 180 THAALLISYSGLGPNLSTLLPILQERDVPTIFVGTPRGGQLNPGLSIYLHVSDRESLQNR 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 ++ A + D LF L +D E + + S Sbjct: 240 ITQFASHIAVQYVLDSLFGCLFARDYEQSRAFLERS 275 >UniRef50_C5CD76 Transcriptional regulator, RpiR family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CD76_KOSOT Length = 278 Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 68/278 (24%), Positives = 122/278 (43%), Gaps = 10/278 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L + +R L S++K+A Y+ P ++S Q LANE V S+V+K A+KLG+ Sbjct: 4 SFLNQFNERVGALTSSEEKVARYIKENPLKVVNMSIQSLANECFVVPSTVIKTAKKLGFS 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+AL+ L + D L ++ + + SEE Sbjct: 64 GFSELKIALAAELDKAAITGLDS--------DILSNTFKRYAEFVQELIEQASVRLSEEL 115 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L+E ++ A +I + G + + KL++IG A + + + + +D Sbjct: 116 LNEAARIVLEANKIDIYSFGFDSIAGLDLYLKLVQIGKTTAHYENGYMQMISATYLGTED 175 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++AIS TG ++L A + G KV+ I + + L + L T Sbjct: 176 AVIAISSTGSSKDLFDAVKRAIESGAKVIVI-APSSSMLAGLETVYLDTYFSTLVLPEGG 234 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 I+ Q L D L++ +++ D E + ER + +++ Sbjct: 235 IATRLVQLFLIDQLYLRILKMD-EKSSERYEKFQNVLE 271 >UniRef50_B4BI96 Transcriptional regulator, RpiR family n=1 Tax=Geobacillus sp. G11MC16 RepID=B4BI96_9BACI Length = 270 Score = 154 bits (389), Expect = 3e-36, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 105/258 (40%), Gaps = 5/258 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L I +S+ +A+Y+L + +S LA S +++ +F Q+ Sbjct: 7 KLLNFIESSTDQ-TKSEIIIAEYILRNVEKIPKMSIYDLAEACHTSPATITRFCQRFENI 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F LK E S E + Q + E A++ T + ++ Sbjct: 66 TFKELK----EYARSFIEFNDTEVDCQNLKTKFNIKQINEYYDELHASLKQTEQLLRSKE 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V + ++++ G+ S L+A+N +K +++G A A + ++ ++ +P D Sbjct: 122 IIQVVHEIHRSKKVAFFGVTFSHLIARNAQFKFIRLGKYATAYSNHENQISEAESLTPRD 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L + IS++G R + + + G ++AITG L Q A + + + + + Sbjct: 182 LAVVISFSGETRFIVQLVKILKKRGIPIVAITGNEKGYLAQHAKQIIKVSSCKLKSFKSP 241 Query: 242 ISACHAQGMLTDLLFIAL 259 I + + +++ Sbjct: 242 ILEEINMLSVINSIYLVY 259 >UniRef50_Q03HE1 Transcriptional regulator n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03HE1_PEDPA Length = 251 Score = 154 bits (389), Expect = 4e-36, Method: Composition-based stats. Identities = 49/247 (19%), Positives = 98/247 (39%), Gaps = 17/247 (6%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 ++ Q L Q + + Y+ + + ++ + L+ ++ VS +++++F +K+G++GF K Sbjct: 5 EKVQTLNQLELFVYKYVTSHLEECKTMTIRDLSTQSHVSSTTILRFLKKMGFEGFSDFKY 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L P S I + T EK+ E + Sbjct: 65 VLRHRNDRTPASELSQDLGPIGQF-----------------LKQTATTEYTEKMEEVARV 107 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + + + G+G+SG +AQ A L G A+ D + L++ +S Sbjct: 108 VAQSNTRLFFGMGSSGSMAQYGARILSNYGMLTLAITDPFQPQPISERDYSKTLIILLSV 167 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 +G + A+ + G K++AIT + + L Q A + L E S + ++ Sbjct: 168 SGETEGVLTQANYYRQNGAKIVAITANSTSTLAQIADYSLTYDIPENKVGSLNFTSQIPV 227 Query: 249 GMLTDLL 255 L + L Sbjct: 228 VYLLEQL 234 >UniRef50_C3RPM1 Predicted protein n=3 Tax=Bacteria RepID=C3RPM1_9MOLU Length = 278 Score = 153 bits (388), Expect = 4e-36, Method: Composition-based stats. Identities = 35/258 (13%), Positives = 88/258 (34%), Gaps = 2/258 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L I Y + +L + +S +LA+ S +++ +F + L Sbjct: 16 NLLTYINASYSQ--DMYYTICYQVLNNIEKIPDISINELADLCYTSPATISRFCKALKCD 73 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F K + L + + + + + ++ + + + Sbjct: 74 NFAEFKKEVQVGLKQASHEIKLHPDDLVEIHQNPVHCVDMVYDLTINSLIESKKHINIHE 133 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + ++ A+++ G + ++A + +KL+K+G + A D ++ D Sbjct: 134 IDRLCDIIYDAKKLHFFGFQFNKILASDIQFKLVKLGKFSYAFADRGDDSQRIELLDEDS 193 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + +S + + KV+ +T + + + A +E +S Sbjct: 194 VAIVLSVRARLSPVGDLIKSIKNREAKVILVTLNAESEVIELADKTFVVHGKESDFTESS 253 Query: 242 ISACHAQGMLTDLLFIAL 259 IS D+L++ Sbjct: 254 ISGTTVMKTFFDVLYVRY 271 >UniRef50_C3RRE4 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RRE4_9MOLU Length = 290 Score = 153 bits (388), Expect = 4e-36, Method: Composition-based stats. Identities = 44/279 (15%), Positives = 97/279 (34%), Gaps = 7/279 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + + ++ + Y+L + +S++ LA E + S++++F QK+GY Sbjct: 16 MNLVDLLNDSK-QFNETQNIICQYILNHSEDVVKMSARALAKETYTNASTIIRFVQKIGY 74 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + + K+ L L +I + + +K+ + + T N S + Sbjct: 75 ENYNDFKIHLVHDLKEYQA-----ADIKITEKEKSISIVDKISELEKNVIEKTKNQLSLQ 129 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ +L+ I A+ +A A + L + Sbjct: 130 QIEYIAELLKKTTYIDFISSDANACIADYACHLFFLERKIANNYTTSNQQLYLTLTELKE 189 Query: 181 DLLLAISYTGVRRELNLAADEMLRVG-GKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 ++ IS G ++ E+ + K++AITG + + + L I Sbjct: 190 HVVFVISRRGEDEKILKVVQELHKNKEIKIIAITGRKESPIARYCDEILSAIHIGSFVEL 249 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + + + + LF L D + + E + Sbjct: 250 RDMIFQVSAQYIINCLFSLLFTDDYQSIVQFNDEYEKIY 288 >UniRef50_C3RI70 Phosphosugar-binding transcriptional regulator n=4 Tax=Bacteria RepID=C3RI70_9MOLU Length = 284 Score = 153 bits (387), Expect = 5e-36, Method: Composition-based stats. Identities = 43/277 (15%), Positives = 113/277 (40%), Gaps = 3/277 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN R+ L +++ L DY+ P+ ++S+ +++ +S ++ + +KL Sbjct: 1 MNIFSRL-DNLTDLTTNEQTLVDYMKNNPERFINMSADEISAACFISIPTIYRLCKKLEL 59 Query: 61 KGFPALKLALSEALASQ-PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G LK+ +S ++ E ++ + ++ + K+ + + A+ N+ Sbjct: 60 NGLAQLKVMVSTSIRDYLKEKKTIDYNYPFSQNETQYQITMKMKELYEQTLIASNNLIDL 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++L + L++A+ I + + +NF +++ +IG + + L +S Sbjct: 120 DQLRLIASALKNAQFIDMYTSAGNLYFVENFKFQMSEIGRFVNVPVEEYQQLLAAASSDK 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT-IAEEQATN 238 + + + +S+ G ++ + + ++ I+ T +L + LY E Sbjct: 180 EHIAIVVSFEGRGMIVDKIVKLLKKNNTPIILISSTTLKSLVSLCDYNLYLSPYENHYNK 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 +S S + L D ++ + D + + + Sbjct: 240 ISSFSTRLSLLYLLDCIYTCYFKLDYDKNVKYKTETY 276 >UniRef50_Q4KEH9 Transcriptional regulator, putative n=8 Tax=Pseudomonas RepID=Q4KEH9_PSEF5 Length = 284 Score = 153 bits (386), Expect = 7e-36, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 96/281 (34%), Gaps = 8/281 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + I L S++K+ LL +LA AGVS ++V+ +KLG+ Sbjct: 3 SLRDLITDPALDLTPSERKVVRALLDHYPRNGLGPMSRLAEHAGVSDPTIVRLVKKLGFS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + AL + + SPS + + + + + ++ + T + E Sbjct: 63 GYGEFQEALLSDMDDRLRSPSTLLRPRSQVA--QGDTWGRYLADSQRVLQDTQALTQPED 120 Query: 122 LHECVTMLRSARR-IILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + L +R + G S +A L + + D L + Sbjct: 121 IRVLMDWLLDSRHSVYCFGGRFSSFLALYLFNHLRLMRPGCFFLDDNAQLPDRLFDVQRQ 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL+L Y + + A + +V+ T + L++ A + E + + Sbjct: 181 DLVLLFDYRRYQSQAMRVASAVKARNARVVLFTDIYASPLRELADLVISAPVE----SLS 236 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + L L + +R+ +AL + Sbjct: 237 PFDTLVPALAQVEALVACLTPR-SPHLDQRLEGIDALRAEF 276 >UniRef50_A4EBN8 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBN8_9ACTN Length = 285 Score = 153 bits (386), Expect = 8e-36, Method: Composition-based stats. Identities = 58/278 (20%), Positives = 112/278 (40%), Gaps = 3/278 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +R ++D+ +A YLL + L+ +LA E S +++++F +KLG G Sbjct: 2 ILDSLR-NSASFNETDRAIATYLLNHTGDLKTLTMAKLAQETYTSNATIIRFCKKLGLSG 60 Query: 63 FPALKLALSEALASQPE-SPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + L + L + ++ + +V + D + + L + T K Sbjct: 61 YRELIMQLIQEISGDYLLAATVDHNRPFGSTDSIEAIEGNLANLLKGVIDQTKIELDSAK 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + SA RI + G S L F L+K+ + D V+ P D Sbjct: 121 LSIIAKAVLSAPRIYIFAKGESYLAGCIFRNNLLKLDRHVTMADDGGLQTLHVKNGRPGD 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN-SA 240 L L +SY+G+ + + A + G K IT F+ +AL ++ L E+ A Sbjct: 181 LFLFLSYSGIHYDYSKYAAALSERGIKPCLITAFSDSALARQCDTVLLIPKSERVIGKVA 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + S+ + +++ + QD + +++ + Sbjct: 241 NYSSMISLTYTLQVIYSLIFNQDYQENYRVKHEADSFI 278 >UniRef50_Q1GCU6 Transcriptional regulator, RpiR family n=2 Tax=Ruegeria RepID=Q1GCU6_SILST Length = 285 Score = 153 bits (386), Expect = 8e-36, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 103/279 (36%), Gaps = 6/279 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +++ R L +++++L+ +L S +LA A VS +V + QKLG+ G Sbjct: 4 IAEKLKSRESDLTRAERQLSAAILDNYPIPGLGSITELAELAEVSTPTVARMVQKLGFSG 63 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 +P + AL E L +P Q P + + + ATL + E+ Sbjct: 64 YPEFQHALREELREIISNPVEKRAEQAPEL-PEGHMLNRYAVAVYDNIRATLENVNLEEF 122 Query: 123 HECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 +L R+ + G SG +AQNF L I + + + +V P D Sbjct: 123 DTLCALLADTNSRVHIAGGRLSGTLAQNFYLHLQMIRRDVFMIPPRASWTHSVLDLLPGD 182 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L+ L A+ G KV+ T + +Q+ A+ + + Sbjct: 183 TLILFDIRRYENATLLLAEMAHERGVKVVLFTDQWRSPIQKEATFTFAARIAVPS----A 238 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + A +L + + + + + R EA + Sbjct: 239 WDSGVALLLLIESMIAKIQEDHWDTVKARNDELEAAFDR 277 >UniRef50_B6FRS1 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FRS1_9CLOT Length = 237 Score = 153 bits (386), Expect = 8e-36, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 108/247 (43%), Gaps = 20/247 (8%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 + + +Y++ ++++ ++LA+ VS SS+++F +K G G+ ++ Sbjct: 10 FNDLELVIYNYIMKNSSQVQYMTIRELADAVHVSTSSIMRFCKKAGCDGYAEFRVKFKLY 69 Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR 133 L S+ E I+ + L + +T+A EE++ V M+R A+ Sbjct: 70 LESRKE---------IQPQNDLSELLHYFQGVHTSAF--------EEQISRAVDMVRGAQ 112 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRR 193 ++IL G+G+SG +A+ A +G + + D + ++ +++A+S +G R Sbjct: 113 QVILIGVGSSGTLARYGARYFSNVGKFSQYIDDPYYPISRDTYIDT--VVIALSESGETR 170 Query: 194 ELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ-ATNSASISACHAQGMLT 252 + + R K+L+IT + L + + L E+ ++++ L Sbjct: 171 QTIEMTESFKRHQCKILSITNKDSSTLSKISDMNLSYFVTERFVEGRYNVTSQVPVLFLM 230 Query: 253 DLLFIAL 259 + + L Sbjct: 231 ETIARRL 237 >UniRef50_C8SN57 Transcriptional regulator, RpiR family n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SN57_9RHIZ Length = 301 Score = 152 bits (385), Expect = 9e-36, Method: Composition-based stats. Identities = 55/274 (20%), Positives = 112/274 (40%), Gaps = 7/274 (2%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 +I + G++ + A Y+L +P+ LS ++ A +AGV +++ + AQ LG G+ A Sbjct: 9 QIVSAFDGMSAQLQSAARYVLDRPEDVALLSMREQARQAGVQPATMTRLAQYLGLDGYEA 68 Query: 66 LKLALSEALASQPESPSVPIHNQIRGD--DPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 ++ + A+ S+ + Q+ + +++ + ++ E+L Sbjct: 69 VRDIHAAAVRSRGVGFAGKAGVQVASQRLKGDHALVADMLRSLAGQIAHLAEPSTIERLV 128 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATV-QASSPDDL 182 L +ARR+ G+ +S VA + + L IG + + V ++ +DL Sbjct: 129 TTAKALTAARRVYCLGMRSSHAVAWHLHYILSLIGEKSVMLHGAGGTDGDVLGRATGEDL 188 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L+A S R A+ G ++A+T L Q A H + + Sbjct: 189 LIAASVLPYTRLTIELAEYAAGRGVPIVAVTDSEVAPLAQLADHLIIVPTASPSF----F 244 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 +++++L + Q E A E +R + Sbjct: 245 HTMTQAFIVSEVLGALVAGQAGEGAIEALRRFDE 278 >UniRef50_B6GAY7 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GAY7_9ACTN Length = 288 Score = 152 bits (385), Expect = 9e-36, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 118/258 (45%), Gaps = 4/258 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I Y L+ ++ +ADY++ P ++++ +A E+ S +SV +FA++LGY+ Sbjct: 6 SVINEICSLYDQLSDGERSIADYMMANPFDVASMTTRDIAQESETSAASVSRFARRLGYE 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F AL+ AL + + D E ++ + TL++ + Sbjct: 66 SFSALRQALLRD----EAAYDDRGQLAVISIDAPAAALETVLMVKNRELTDTLSLLDARE 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V +L + I +G + VA + ++ L ++G A A++ + +P D Sbjct: 122 LVRAVHLLERSVSITFAAVGNTIPVALSASFLLGQLGLRCACAPTTEAMMLDSLSLTPRD 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++ +S +G + LN D ++ + IT + L +RA+ L+ ++ ++ Sbjct: 182 VIVFLSKSGHSKRLNKMMDNVIDSETPTIVITNQPSSPLARRATCVLHAATHDKMLSTEL 241 Query: 242 ISACHAQGMLTDLLFIAL 259 + ++ + ++LF+ L Sbjct: 242 PFSHNSINYIIEVLFLLL 259 >UniRef50_B8DD46 Phosphosugar-binding transcriptional regulator, RpiR family n=17 Tax=Listeria RepID=B8DD46_LISMH Length = 245 Score = 152 bits (385), Expect = 9e-36, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 104/258 (40%), Gaps = 22/258 (8%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 + + +++ L Y++ D + ++L+ VS +S+V+F +KLG +GF K+ Sbjct: 5 EVIRQFTETEHHLYRYIMDNRDKVMFMRVRELSEVTHVSPASIVRFTRKLGCEGFSEFKV 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L + + + + V E+ + T+N + + L + Sbjct: 65 KLKQEATREVK----------KKTADTVEVLEEFFER-------TMNRDYDHVLDAAAEI 107 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + A ++ GIG SG++A+ + + ++D + +++ +S Sbjct: 108 INEADLVVFFGIGTSGILAEYGSRFFSNMKKRTFYIKDPFYPNP-GEQFKNKAVMIILSV 166 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 +G ++ A M + G ++++IT + N L + + ++ + +I+ Sbjct: 167 SGETDQVLEQAQNMQQYGSRIISITNTSHNTLAGLSDVNIPYYVTQEMVDKTNITTQIPV 226 Query: 249 GMLTDLLFIALIQQDLEL 266 L + A+ +++ Sbjct: 227 LFLLE----AMAKKNYNQ 240 >UniRef50_A6FUC4 Transcriptional regulator, RpiR family protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FUC4_9RHOB Length = 284 Score = 152 bits (384), Expect = 1e-35, Method: Composition-based stats. Identities = 49/281 (17%), Positives = 97/281 (34%), Gaps = 6/281 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M R+ + + S+++L + LL S LA+ A VS ++V + QK G+ Sbjct: 1 MTVSDRLLEHRDAMTPSERQLVNTLLDDYPIVGLSSITDLADAASVSTTTVTRMLQKTGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GFP + AL L P P + + ++ +L+ + E Sbjct: 61 EGFPQFQAALRSELKEMISDPIAKRSVWKHEL-PDEHILNRYSRQALDNQQRSLDDVNPE 119 Query: 121 KLHECVTMLRSARRI-ILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + +L + R + G + +A L I N V + A + Sbjct: 120 DFDQLCQLLSTPERTVYIAGGRITSALANYLYLHLQMIRPNVRLVSNSGAWPQDLLDVKQ 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+++ A +++ T + + + AS+ + Sbjct: 180 GDVVIVFDVRRYENTTLQMAQMCASKNAQIVLFTDQWRSPIHRIASNTF----SGRIVVP 235 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ +C ML + AL ++ ER EA+ + Sbjct: 236 SAWDSCLPLLMLIECTIAALQERMWTTVKERTDDLEAMFDQ 276 >UniRef50_C5RND9 Transcriptional regulator, RpiR family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RND9_CLOCL Length = 252 Score = 152 bits (384), Expect = 1e-35, Method: Composition-based stats. Identities = 38/255 (14%), Positives = 96/255 (37%), Gaps = 22/255 (8%) Query: 10 RYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLA 69 L + +L Y+ + ++ ++LA E VS +++++F + +G +G+ K Sbjct: 6 NVNNLNDLELQLYRYISENMEKVVYMRIRELAQETHVSTTTIIRFCKAMGCEGYSDFKTM 65 Query: 70 LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTML 129 L L + S + L E+++ + + +++ ++ Sbjct: 66 LKLYLKEYKRNDSKL----MLSTGILEDFLERVVNGDLD-----------DAMNKAAKLI 110 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYT 189 ++ GIG SG + A L +G A + D + L + + +AIS + Sbjct: 111 HEQENVLFIGIGNSGHSSGYGARYLSSLGKFALYIDDPYYPLT--GDIIKNSVTIAISVS 168 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-----NSASISA 244 G + + G K++++T + L + A + ++++ I++ Sbjct: 169 GESDSILRLTNIFKERGSKIISVTNRKSSPLSKMADVNISYYIQQESFADNGLEYRDITS 228 Query: 245 CHAQGMLTDLLFIAL 259 + + + + Sbjct: 229 QVPSIFIVETIAKKV 243 >UniRef50_C1I4M4 Predicted protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I4M4_9CLOT Length = 264 Score = 152 bits (384), Expect = 1e-35, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 97/278 (34%), Gaps = 18/278 (6%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +LRI ++++A+Y L + S +L+ VS +S+ +F +K+G Sbjct: 5 IILRITHAKVKFTYVEEQIAEYFLSNREP---RSINELSKLLCVSPASITRFCKKIGLNN 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + L SE L S + L +K+ Sbjct: 62 YKELMYLYSEHLKENNGIRSNK-------------ISSDLQNSYFKIFNNIDTNFDRDKI 108 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + + R + + +G S AQ+F ++ ++G + D A+ DDL Sbjct: 109 EKICEAIHNNRFMHIFALGLSATAAQDFKFRFSRMGKLVEVIYDKEAIEMASTLIKEDDL 168 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + + G + L A + G ++ ITG + + + + + T ++ I Sbjct: 169 VFIFTLRG-NKHLQKCAKLLREKGANIILITGNRNSKIVEYSDISVITDNLSGEESTGMI 227 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 SA + D L + + +E + K Sbjct: 228 SAQIPILIQID-LIHYYYVRKYSEVLDEWVSTEKVFNK 264 >UniRef50_Q5LQ93 Transcriptional regulator, RpiR family n=5 Tax=Rhodobacteraceae RepID=Q5LQ93_SILPO Length = 290 Score = 152 bits (384), Expect = 1e-35, Method: Composition-based stats. Identities = 57/279 (20%), Positives = 98/279 (35%), Gaps = 7/279 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RI+ + L +S+++LA LL S +LA AGVS +V++ A+KLG+ G Sbjct: 8 VKQRIQDETEQLTRSERQLASILLQDYPMGGLQSITKLAVAAGVSTPTVIRMARKLGFDG 67 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 FPAL+ AL E +A+Q + P + + + + A M TL Sbjct: 68 FPALQDALREEVAAQIKKPISKRDGWVVDEGAEHPLMR-FAQVVWANMRHTLERTDTALF 126 Query: 123 HECVTMLRSARRI-ILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASSPD 180 +L R + G + A + I N + + + Sbjct: 127 DRAAAILADTSRPLYVVGGRITRSNADYLYNHMQIIRPNVTMLGNSANVWPQYLLDMDQS 186 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +L+ L A G V+ T + + + A + Sbjct: 187 SVLVIFDIRRYEAHLEKLAQIASERGVTVILFTDQWGSPIGRVADLTF----NGLVEAPS 242 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S + A ++ + L + E + ERI EA+ Sbjct: 243 SWDSTIALQLIVEALIAEVQGARWEESKERIEELEAMFS 281 >UniRef50_D0CNW7 Transcriptional regulator, RpiR family n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CNW7_9RHOB Length = 291 Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 103/276 (37%), Gaps = 7/276 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RI+ L +S+++L LL A S +LA A VS +V++ A+KLG+ G Sbjct: 8 VKQRIQDELDDLTRSERQLGSILLQDYPMAGLQSITKLAAAAQVSTPTVIRMARKLGFDG 67 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 FPAL+ AL E +A+Q + P I D+ + + + M TL + Sbjct: 68 FPALQDALREEVAAQIKKPISKRDAWIVDDETEHPI-TRFAQAVWTNMRHTLERLDKSMF 126 Query: 123 HECVTMLRSARRI-ILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASSPD 180 +L RR + G + A + I N + + + Sbjct: 127 DAVAQLLADTRRHLYVVGGRITRSNADYLFNHMQIIRPNVTMLGNSANVWPQYLLDMDDS 186 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +L+ L A G V+ T + + + A + + + E + Sbjct: 187 SVLVIFDIRRYEAHLEKLAQVASDRGVTVVLFTDQWGSPIGRAAHYTFHALVEAPS---- 242 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 S + A ++++ L + + E + ERI E Sbjct: 243 SWDSTIALQLISETLIAEVQEARWEESKERIEELER 278 >UniRef50_C0D8Y2 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D8Y2_9CLOT Length = 278 Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 112/279 (40%), Gaps = 11/279 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M ++++ L+ KK+A Y+L + +L+ +++ EA VS+++V++FA +G+ Sbjct: 1 MQFEALVKEKIAELSAGQKKVAQYILGHLEETSYLTLTKISREANVSETTVIRFAYSIGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + F A++ AL + + + ++ D ++ + + T S + Sbjct: 61 ESFSAMQGALQQEILGNNSVKAEGNAHESAYYD-------HVLNREISILEKTKKGLSRD 113 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSP 179 K+ E V L A + G A F L + V + + V + Sbjct: 114 KVDEAVERLYRADMVFSVGSRTGFPAALWFGIALGRFRDGVFPVNPVGEDFFSNVMKVTE 173 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +++AIS + + G ++ +T + A T + T Sbjct: 174 HSVVVAISMARYSKATYRFIQQAKARGASIILVTDSQISPPALLADLVFLTESNRDETGI 233 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +IS+ A L +++ + L ++D A ER++ E L Sbjct: 234 NTISSISA---LLNIMAVGLRRRDPRQAMERLKVLETLY 269 >UniRef50_B0NY52 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NY52_9CLOT Length = 256 Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 51/272 (18%), Positives = 109/272 (40%), Gaps = 22/272 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + Q L+++D + DY+ +++ ++LA + VS+++V++F +KL Sbjct: 1 MRLEELLNQYSDRLSENDLYIWDYVEKHKKQCENMTIEELARKCNVSRTTVLRFTKKLSL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGF K+ L + + S + + ++ ++ + ++ Sbjct: 61 KGFGEFKVHLRMENDDKKQDTSKAVKVCLAYEEMMQDMVQQ------------------- 101 Query: 121 KLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E ++ A+RI + G G +VA+ F M V+ Sbjct: 102 DFKEISELIYQAKRIFVYGTGMVQKIVAKEFKRLFYFTDKRFYDFSGMTEYETVVKYVDS 161 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE--EQAT 237 DDL+L IS +G A ++ G +++IT N L + +++ LY EQ Sbjct: 162 DDLVLIISVSGEADFTIDFAKKVRIKGTPIISITKQKKNPLAEISNYNLYISTTMVEQNL 221 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPE 269 + + +L +++F+ ++ E + Sbjct: 222 CKGRYESMTSYYILAEMMFLRYLEYLEERSQS 253 >UniRef50_Q2J952 Transcriptional regulator, RpiR family n=3 Tax=Frankia RepID=Q2J952_FRASC Length = 319 Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 64/240 (26%), Positives = 106/240 (44%), Gaps = 3/240 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 IR GL S++++A+ L +P S+ QLA AG S ++VV+ Q LG++G Sbjct: 20 LFATIRAALPGLLPSEQRVAEVCLARPGDVVEWSAAQLAEAAGTSTATVVRACQHLGFRG 79 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F ++ L+ + + DP+ + + + TA + L +L Sbjct: 80 FQHFRVELARESGAAALRGEIGRT---DAADPVERLVDTVFGAATAVLADALGPLDRSRL 136 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V +L A R+++ G G S VAQ+ A + + +G A A D A T + +P D+ Sbjct: 137 APAVDLLDRADRLLVIGNGGSAPVAQDAALRFLGMGRPAEAPGDSIAQELTARLLAPSDV 196 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L I+ +G AA+ G V+ IT +T L + A L A + +S I Sbjct: 197 CLVITSSGANEPSLRAAEAARTAGAAVIGITSYTAGPLAEIADISLVVGAPDWPISSDMI 256 >UniRef50_Q03HS5 Transcriptional regulator n=2 Tax=Pediococcus RepID=Q03HS5_PEDPA Length = 248 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 41/255 (16%), Positives = 104/255 (40%), Gaps = 11/255 (4%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 L+ +++ + ++ + LS +L+ A VS +++++ +K G+ GF K ++ Sbjct: 4 DNLSSTEQFVWKFIQDNLELVPFLSIVELSERANVSTATIIRALRKKGFTGFSDFKHGVA 63 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 + +S+ + + ++K + T+ + + + + V ++ Sbjct: 64 KNNSSKDFTNLERAD---------SDIKSAILKNEHE-VTNTIKMINIPDIEQSVQRIKH 113 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGV 191 A+ I + G S L+A+ KL + N D + + P +L++ IS G Sbjct: 114 AKTIYIFARGFSELIAKELLVKLQLLNKNCQLSDDPNIIRTLSADIRPGNLVIIISLNGE 173 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS-ISACHAQGM 250 EL AA + + ++ IT + + + ++ L E A + + + Sbjct: 174 TPELIEAAKKTSKNKIPIILITTNADSTIGKYSTIELCGFKSETTYFPAFEVHSRLPLQV 233 Query: 251 LTDLLFIALIQQDLE 265 ++ +L + + + + Sbjct: 234 ISRVLLDSYVIRTQK 248 >UniRef50_UPI000196B851 hypothetical protein CATMIT_00169 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B851 Length = 283 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 45/278 (16%), Positives = 96/278 (34%), Gaps = 14/278 (5%) Query: 1 MNGLLRIR---------QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSV 51 M I + L+ ++K + Y++ D ++SS++LA + +S+ Sbjct: 1 MLLDELIESGGNLQKGIELNTKLSDAEKSICQYIIEHLDQVPYMSSRELARLTYSNPTSI 60 Query: 52 VKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMY 111 ++ ++K GY F K + L + +D K + + Sbjct: 61 LRLSRKFGYANFNDFKFDIVLKLRDMHMPKVE-----LNKNDSGLECINKTAQLYDNVIA 115 Query: 112 ATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL 171 T N S + E + +L I + + +A LM IG + + Sbjct: 116 RTKNNISLAQYDEIIDVLNKCEAIDIIATDMNANIAHYAQHVLMPIGKQIHVYENQDLQV 175 Query: 172 ATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI 231 +++ ++ TG +R + A + R G +AIT + + ++ + Sbjct: 176 HASLNVPSTHVVILVTKTGFKRHILDNARILCRRGITTIAITPDDKGPISKCVTYTIKAE 235 Query: 232 AEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPE 269 + E + + + DL F +L + E Sbjct: 236 SNETFVKLRDVIFSISTKFIFDLFFTSLCAINYENTLN 273 >UniRef50_D1Y5K3 SIS domain protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y5K3_9BACT Length = 284 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 44/280 (15%), Positives = 102/280 (36%), Gaps = 8/280 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L +I++R + + +K+A Y++ + +A AGVS +SV+KF ++ Y Sbjct: 3 NFLEKIQKRQSAFSPAVRKVATYIMEHYSDIPFCTITDVATAAGVSVTSVIKFCTEMQYS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNV-NSEE 120 F K A+ + + S + + V +++ + + ++ T+N ++E Sbjct: 63 AFSEFKQAMRDHIQQTLISHYNINDDNFTEAH-QQSVLDEVTRLDIENIHRTMNNPINQE 121 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASSP 179 + + + A I G S + A + L G + + + + Sbjct: 122 NIKKFFHLAEKAHIIYTMGFRTSAIFATYTSLLLRMQGLTVFPITPGIGDYIDKMLTVHS 181 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DDL++A S+ +++ + ++ +T + A Q Sbjct: 182 DDLVMAFSFNRYSKDVVKMLKTLHDRKIPIVLVTDDKLSPSYVYADLVFTCSTRTQNY-- 239 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +++ L + +F A + + + E Sbjct: 240 --VASYVGCMSLLNSIF-AYGISHYKNYVKSLSQLEQFYS 276 >UniRef50_A9H555 Putative uncharacterized protein n=1 Tax=Roseobacter litoralis Och 149 RepID=A9H555_9RHOB Length = 286 Score = 150 bits (380), Expect = 4e-35, Method: Composition-based stats. Identities = 57/284 (20%), Positives = 104/284 (36%), Gaps = 7/284 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M RI Y L+ + A ++ P S + +A +GVS ++ + A+ LGY Sbjct: 1 MTVQDRISGSYADLSDKLRVAAKFVSENPAEIATRSLRSVAQSSGVSPATFSRLARALGY 60 Query: 61 KGFPALKLA--LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 + + L+ L P S G + R + E A + + + Sbjct: 61 RDYEQLREEGRLVVERQMSPFSERAAKLRAQAGKEQGRALLEHQSAACIANVEKLVASVN 120 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFN-AAAVRDMHALLATVQAS 177 + L V + A+ ++L G S V + N A R+ L AT+ Sbjct: 121 RDALERAVRQIDEAKTVLLVGSMGSAGVIDYLGYMGQWFKQNWKVAGRNGIELSATLSRI 180 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 + D+++ + R A G K + I+ + Q A+H + Sbjct: 181 NEGDVVVGLVKAPYARRTVAALKAAQDRGAKTVVISDSPTSPALQFANHSFIVATQSPQF 240 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+ A +L + + LI + A E+IR +E +++L Sbjct: 241 ----FSSYAATLVLLETIISMLIARAGPDAEEQIRAAEQTIERL 280 >UniRef50_C7H192 RpiR familytranscriptional regulator with phosphosugar-binding domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H192_9FIRM Length = 266 Score = 150 bits (379), Expect = 5e-35, Method: Composition-based stats. Identities = 60/248 (24%), Positives = 108/248 (43%), Gaps = 4/248 (1%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L +++++AD +L A +S +LA + S+++V + KLGY + +L L+ Sbjct: 17 QLYSAERRIADCILADVKWASVATSAELAKASHSSEATVTRLCHKLGYANYRKFQLELAR 76 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 + Q E+ + +DPL L + AT+ + +L + +++LR+A Sbjct: 77 DVLEQQETEARKRP----PNDPLHQALLDLQNNRQEEVQATIQALNLVQLRKVLSILRAA 132 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVR 192 I + G+S VA + + KL +G + A +P D LL IS G Sbjct: 133 EIIEIEANGSSLPVAMDASLKLGSLGKRCMISPVPEKARSFASALTPKDALLLISSAGRC 192 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLT 252 L AA + G V+ IT +AL AS+ L Q S + + + ++ Sbjct: 193 EALETAARAAKKNGTPVILITCDKRSALAGHASYTLLASNRIQRIASDMMPSQLSAALVV 252 Query: 253 DLLFIALI 260 + L+ L+ Sbjct: 253 EALYYLLV 260 >UniRef50_Q03NG7 Transcriptional regulator n=18 Tax=Bacilli RepID=Q03NG7_LACBA Length = 269 Score = 150 bits (379), Expect = 5e-35, Method: Composition-based stats. Identities = 45/277 (16%), Positives = 101/277 (36%), Gaps = 11/277 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + L+ +++KL DY++ ++ S +++A+ VS ++ ++F +K+G+ Sbjct: 1 MNFFEIVNAHLSELSPNEQKLFDYVVTNMGQIKNQSIREVASATFVSTATFLRFVKKIGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF + L ++ E+ + + +E + ++ V + Sbjct: 61 SGFSEFTTVIKFTLINRQEAERTTPFVVQQ---------KDYREEYLKNIGESIRVIQPD 111 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V L + G S + GF RD + D Sbjct: 112 HLRQVVDRLAQHPDVFFFAKGVSKHAVAYIDYLYTMAGFKTHFPRDHDYRKQALTQVDND 171 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGK--VLAITGFTPNALQQRASHCLYTIAEEQATN 238 L+ ++Y G E+ +++ + +++IT N +Q + Y + N Sbjct: 172 ALVFILTYKGSDGEMLDMMSQLVGRPVRPLLVSITEPDNNTIQNLSDINFYIFTDGVTVN 231 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 IS+ + + +L+ ++ R E Sbjct: 232 GTDISSRISTISVMELILYQYVEDYGGRDFHFQRQLE 268 >UniRef50_C0VS80 RpiR family transcriptional regulator n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VS80_9CORY Length = 295 Score = 150 bits (379), Expect = 6e-35, Method: Composition-based stats. Identities = 40/284 (14%), Positives = 97/284 (34%), Gaps = 12/284 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R++ + + ++ LADY + + S ++V +F +KLGY+ Sbjct: 13 LFERVQ-KISDMTPMERNLADYFTDAYPELAFKNLVDICEATQSSTATVTRFVRKLGYQN 71 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F L + ++S +SP + + + + T + E+ Sbjct: 72 FRDFSKQLRKEISSNFDSPLQRNSEIDDDPQSPGTLLFQHLARAQEDLQQTSRIVDCEEF 131 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF----NAAAVRDMHALLATVQASS 178 ++ A R + S ++ +G N + + + + + Sbjct: 132 ELIADLISDADRSLFL---NSSATGKDLLHYFYLLGKYHRPNLFFLPGIDMVPHELVDGN 188 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D +LL ++ ++ +GG+ + IT L++ + H L + Sbjct: 189 KDSILLTTNFDRHPIQVQSVMRAFKEMGGETILITNRQAGVLRRYSDHVLLVPSSSDF-- 246 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 + + ++ + L A+ + + R + E L++ V Sbjct: 247 --RFKSRSSMLVVLESLLAAMESRYPDRVKARTKKMEGLMEDFV 288 >UniRef50_A7GA30 Transcriptional regulator, RpiR family n=10 Tax=Clostridium RepID=A7GA30_CLOBL Length = 259 Score = 150 bits (378), Expect = 6e-35, Method: Composition-based stats. Identities = 51/264 (19%), Positives = 99/264 (37%), Gaps = 12/264 (4%) Query: 8 RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALK 67 L QS+ + Y+ + + +S Q+L+ + S +++++ +KL GF LK Sbjct: 7 NNILNTLTQSELSVLQYIDVHSNEVLTMSIQELSEKVFFSTATILRLCKKLNLSGFSELK 66 Query: 68 LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 L ++S S I +K++ + + + T + + L V+ Sbjct: 67 FTLKNNVSSNNSLKSTAIST------------KKIVTDLYSEIENTGRLLDTKTLDTIVS 114 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAIS 187 L S ++I L G + + + L+ G + V + +D+L S Sbjct: 115 YLLSNKKIHLFSYGLTNMAFEYMQRYLLATGRQTILYKTDTLAYKAVNNLTENDVLFLSS 174 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHA 247 TG A ++AIT FT N L + A LYT +E+ + I Sbjct: 175 STGSNPSTLKLAKIAKNSNTIIVAITPFTNNPLSKIADINLYTFIKERDFFDSDIKNRTC 234 Query: 248 QGMLTDLLFIALIQQDLELAPERI 271 + D++ I+ + + Sbjct: 235 IFYIVDMIIECYIKYLDKSKFNNL 258 >UniRef50_D1Y461 Transcriptional regulator, RpiR family protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y461_9BACT Length = 290 Score = 150 bits (378), Expect = 7e-35, Method: Composition-based stats. Identities = 53/281 (18%), Positives = 107/281 (38%), Gaps = 11/281 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 +R + +++ +YLL A +S +A + VS++ +V+ A+ LG+K Sbjct: 5 KLQELLRSNLDSMPSKARRVVEYLLTHMREAAFVSIGDVAEQLNVSKAQLVRVARILGFK 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ LK AL EA+ Q ++ D + E++ + A + T N E Sbjct: 65 GYADLKGALKEAVLEQVNPAAMLARAMSEEGD----LSERIRQMEHANLEDTWNRLRVED 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH---ALLATVQASS 178 + ++++A I G SG++A+ +L ++G A + L+ ++ Sbjct: 121 VRSFCELVKAAEGIYCAGWSISGMMAECLHSRLRELGLRAHQMYPGSGCLTLIEQARSVR 180 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 DL++A L A R G K++ +T + A + Sbjct: 181 KSDLIIAFDLPSYSVLLTEALQRGRRNGAKIVTVTDSPAAPICGDADLSFFVSDNSPTFG 240 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S+ L +L L + A + + +++ Sbjct: 241 ----SSLIGPLFLIHILTSRLSIDMGDAAMKALAEQSKILR 277 >UniRef50_A6UBD6 Transcriptional regulator, RpiR family n=16 Tax=Proteobacteria RepID=A6UBD6_SINMW Length = 292 Score = 150 bits (378), Expect = 7e-35, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 97/281 (34%), Gaps = 7/281 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I + L +++++LA+ LL + S +A AGVS +V + QKLG+ Sbjct: 8 MTVSDVINAHFAALTRAERQLAETLLDNYPVSGLGSITTVAENAGVSTPTVARMVQKLGF 67 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GFP + L + L + +P + M TL+ Sbjct: 68 RGFPDFQARLHQELEATISNPIAKHDRWAASAPGTHT-LNRFADAVMGNMRQTLSQIEPA 126 Query: 121 KLHECVTMLRSARRI-ILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASS 178 + ++ +R L G + +A L I + + + V Sbjct: 127 EFDTAAALVADLKRKVYLVGGRITRSLADYLFTHLQVIRTGVTQIAANPSSWPHYVLDMR 186 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D+L+ +E+ A G +++ T + + + +S E + Sbjct: 187 QGDVLILFDIRRYEQEMETLARFARDRGVEIVLFTDQWGSPVAKSSSKVFRARIEVPS-- 244 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + + L + L A+ + + +R++ E L Sbjct: 245 --AWDSSVMLLFLVEALIEAVQSSNWDQTRDRMKTLEGLFD 283 >UniRef50_A3YDZ1 Putative transcriptional regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3YDZ1_9GAMM Length = 295 Score = 150 bits (378), Expect = 7e-35, Method: Composition-based stats. Identities = 53/281 (18%), Positives = 106/281 (37%), Gaps = 10/281 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + RI+Q Y L+ + +KLA +L S+ +LA AGVS+S+V + Q+L YK Sbjct: 5 SIEQRIKQIYDQLSPTQQKLASCILNHQGDIATYSATELAKLAGVSKSAVTRLLQRLEYK 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F +K + A PI + + V I+ + + TL Sbjct: 65 DFGEVKRQVRAA-----RRWGTPIAEKQPEHQSISTVFNDYIQCDQNNIQRTLESIQTSD 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL-ATVQASSPD 180 E V + A R+ + G + +A + +L + N + L V + + Sbjct: 120 FDEAVKSIGQAERVYVIGYRNNHALALHLRQQLTQCRDNVNLLPLPGQTLGEEVASFTNK 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D ++ + L + + G ++ IT ++ + + + Sbjct: 180 DTVIIMGIRRRPAWLKNLMITLRKRGIFLIYITDHADVNPKEVSDIHFSCVVR----GVS 235 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + + + +L + Q++ A +RI+ E + L Sbjct: 236 AFDSYASVMNIISVLANGVYQENYNEANDRIQAIEETYQTL 276 >UniRef50_Q6M5C3 Transcriptional regulator, rpiR family n=3 Tax=Corynebacterium glutamicum RepID=Q6M5C3_CORGL Length = 293 Score = 150 bits (378), Expect = 7e-35, Method: Composition-based stats. Identities = 59/258 (22%), Positives = 116/258 (44%), Gaps = 3/258 (1%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 RI L + +K+A+ +L+ + L++Q LA+ GV +++V++ AQ LGY GFP Sbjct: 16 RITTLAPSLQPNQRKVAEVMLVDAPSIVELTAQGLADRVGVGRATVIRTAQSLGYDGFPQ 75 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 L++AL++ LA + + + L + I + A++ + +E+ L C Sbjct: 76 LRVALAQELALAQGASRSMVEGALS--SSLLGHLQAGISDFQASLGTVASALTEDDLTRC 133 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 + L SARR+++ G S + +F+ +L +G +A D + + + A Sbjct: 134 IEGLDSARRVLVASHGLSAPLGLDFSQRLNSMGRSAEVHSDSMSEQIVARQLGEGSVCFA 193 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI-SA 244 IS +G + + G ++A+T F +A+ A L + ++ Sbjct: 194 ISGSGASKATLATIEAARAGGATIMAMTCFAHSAIDVAADVSLIVPPMTASFQDELTRTS 253 Query: 245 CHAQGMLTDLLFIALIQQ 262 A ++++ L LI Sbjct: 254 RAALMLVSEQLIELLITH 271 >UniRef50_A3TM76 Putative uncharacterized protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TM76_9MICO Length = 282 Score = 150 bits (378), Expect = 7e-35, Method: Composition-based stats. Identities = 57/278 (20%), Positives = 106/278 (38%), Gaps = 6/278 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M R+R+ L+ +K LA LL +A +S A VS ++VV+FA+ LGY Sbjct: 1 MTVADRVRRDMSSLSPREKLLARALLSDYPSAALGTSSDFGRAANVSAATVVRFARSLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF L+ L L+ + SP R + + +L + Sbjct: 61 GGFSELQAGLVAELSERAASPVSQYGESTDRRTGSRHWFDDAVAVTVGEAARSLEAIPKA 120 Query: 121 KLHECVTMLRS-ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASS 178 + V +L RR+ + G SG +A+ A+ L ++ + + D + + + Sbjct: 121 DIDAAVALLSDPKRRVCVLGGRYSGFIARYLAFHLQQVRPGVSTLDDAMNTGSSLAIDAR 180 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D+ + + AA + G ++ +T + + A+ L T + Sbjct: 181 RRDVAVIFDLRRYQSSTVEAAVALSAKGTTIICVTDEWLSPVADVATVTLTTSV----AS 236 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + A +L +LL ++Q + A R+ E Sbjct: 237 VGPFDSAAAAFVLAELLVDGVLQSLGQKALRRMEKWEQ 274 >UniRef50_B9DLT1 Truncated putative RpiR family transcriptional regulator (Fragment 1) n=1 Tax=Staphylococcus carnosus subsp. carnosus TM300 RepID=B9DLT1_STACT Length = 190 Score = 149 bits (377), Expect = 8e-35, Method: Composition-based stats. Identities = 48/192 (25%), Positives = 95/192 (49%), Gaps = 4/192 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L ++ +Y L +S+KK+ADY+L +P +++ LA+ S SSVV+F K+ Sbjct: 3 NILYKLESKYPSLTKSEKKIADYILRRPQQIVDMTTHTLADRTSTSPSSVVRFGYKITDG 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK +S+ ++++ + + + ++ L + K++ T + + E Sbjct: 63 GFQELKTEVSKYMSARTKPRQLELQ----SNESLDTIKRKMLSRTTQTLCKVSDAVDEND 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + L+ +R + + G GAS + A++ KL ++G N + +H L+ + D Sbjct: 119 IDKVCARLKQSRTVFIFGFGASYVAARDLFQKLSRVGINVHCIEGVHTLINVIATHDARD 178 Query: 182 LLLAISYTGVRR 193 L IS +G + Sbjct: 179 CLFIISNSGRTQ 190 >UniRef50_C4ZEF4 Glucokinase n=2 Tax=Clostridiales RepID=C4ZEF4_EUBR3 Length = 250 Score = 149 bits (377), Expect = 9e-35, Method: Composition-based stats. Identities = 40/250 (16%), Positives = 100/250 (40%), Gaps = 22/250 (8%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 + + Q + + +Y++ + ++ ++LA E VS +++++F +K+G +G+ +L Sbjct: 5 EMIKSFNQLEMDVYNYIISNEEKVVYMKVRELAEEVHVSTTTILRFCKKVGCEGYSEFRL 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L + ++S+ + + + E + E V + Sbjct: 65 KLKQEVSSKEQKKINLD----------LTAVKDFFERVQ-------TQAFAENIQEAVKL 107 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 L A II G+G S + + A +G+ + A+ D + +A+S Sbjct: 108 LTKASSIIFVGVGNSSFIGKYGARYFNNVGWFSFAIDDP--FTPVFRGKGERIATIALSV 165 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN---SASISAC 245 +G + + A+++ R G +++IT +L + + + E +++ Sbjct: 166 SGETEQTLMLAEKLKRRGSSLISITNKANCSLAKMSDCNINYYVSEYKYKQDEDYDLTSQ 225 Query: 246 HAQGMLTDLL 255 A + +L+ Sbjct: 226 MAVVFILELI 235 >UniRef50_A6X7I1 Transcriptional regulator, RpiR family n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X7I1_OCHA4 Length = 293 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 98/279 (35%), Gaps = 7/279 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M R+ +++ K+ LL A + LA AGVS +VV+FA KLGY Sbjct: 1 MAIRDRLTDGEIDFTRAELKIVRQLLSNYPAAGLNTVAHLAAAAGVSNPTVVRFANKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+P + AL + + SP + + + + ++ + A+ +++ + + Sbjct: 61 DGYPEFQTALLGEVQERMSSPLSMLDTRKPSLE-QENFYQYFLRASIHALESSMQMLPPD 119 Query: 121 KLHECVTMLRS-ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQASS 178 + R+ G SG +A + ++ + + + Sbjct: 120 DFEAAIDAAADLNMRVHCLGGRFSGFLAGLLWSHMKQLRGETRWINGTQADQVDWLVDLG 179 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D+L Y + + A + + G +++ T + + + AS L + + Sbjct: 180 KRDVLFVYDYRRYQIDTIRFARQAAKQGARIVLFTDRWVSPIAEFASVTLTAAVDTVS-- 237 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 T+ L L + + RI E L Sbjct: 238 --PYDTMVPAIAQTEALIAGLTARLANQSRGRIERMEEL 274 >UniRef50_C6QNE5 Transcriptional regulator, RpiR family n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QNE5_9BACI Length = 260 Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats. Identities = 49/267 (18%), Positives = 104/267 (38%), Gaps = 20/267 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I + Y L ++D + Y+L L LA + VS+SS+++ AQKLG+ Sbjct: 1 MKIEELINKHYNQLNETDFHILKYILNNKSECHKLGINSLAEKCNVSRSSILRLAQKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ ++ L S + + + TL + Sbjct: 61 SGYSEFRVFLKWQEQEGNNSDKSQ------------------AEILSNDILETLKYIKTK 102 Query: 121 KLHECVTMLRSARRIILTGIGASGLV-AQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E ++ A+RI + G G + L A + + ++ L ++ +P Sbjct: 103 DFSEMCKLIHRAQRIFIYGTGTAQLDCAFELQRMFLAVQKYLYVIQAQTELEMVIKDMTP 162 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DDL++ IS++G + A ++ G +++T N L + + LY + + Sbjct: 163 DDLVIIISFSGDTPAIFPAVQSLVAKGIPFISVTNLKNNRLARMTPYNLYANSSSNELSD 222 Query: 240 AS-ISACHAQGMLTDLLFIALIQQDLE 265 + ++ + +++++LF + + Sbjct: 223 GTKLNTFASFFIISEMLFSHYVDYLKQ 249 >UniRef50_C3RPB8 LacI-family transcriptional regulator n=2 Tax=Bacteria RepID=C3RPB8_9MOLU Length = 255 Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats. Identities = 46/246 (18%), Positives = 97/246 (39%), Gaps = 20/246 (8%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 ++ L +++ + Y++ ++S + LA VS ++VV+F QKL GF K Sbjct: 6 KQIANLNETETFIYRYVMKHIKVVTNMSVRDLAECTHVSTATVVRFCQKLDCNGFVEFKT 65 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L + D V + + + +EK+++ V Sbjct: 66 KLK----------LFNDGLTLPETDDEIDVLLEFFNYARSVDF-------KEKINKFVKY 108 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 ++ A+ I GIG SG + + A +G+ + ++ D + + LL+A++ Sbjct: 109 IKEAKSICFLGIGTSGTLGKYGARYFSNVGYYSQSIDDPYYPPPVDG--NESSLLIALTE 166 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-NSASISACHA 247 +G RE+ K++ IT + + Q A +Y ++ + +IS+ Sbjct: 167 SGETREVIDQLKMYQSQNTKIVVITNKPGSTIDQMADLGIYYYVKDIILPQTYNISSQVP 226 Query: 248 QGMLTD 253 + + Sbjct: 227 VLYILE 232 >UniRef50_B8IEA9 Transcriptional regulator, RpiR family n=4 Tax=Rhizobiales RepID=B8IEA9_METNO Length = 296 Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats. Identities = 56/282 (19%), Positives = 107/282 (37%), Gaps = 10/282 (3%) Query: 1 MN---GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQK 57 M+ I ++ L + A ++L P+ LS ++ A AGV S+ + AQ+ Sbjct: 1 MDHGPLTDEIVATFETLGPQLQAAARFVLEHPNDVALLSMREQARRAGVQPHSMTRLAQR 60 Query: 58 LGYKGFPALKLALSEALASQPESPSVPIHNQIRGD--DPLRLVGEKLIKENTAAMYATLN 115 LG G+ ++ + A+ S Q+ R + ++I A + Sbjct: 61 LGLPGYDDVRALYAAAVREGSLGFSGKAGTQVAHQKAKGERALAAEIIASVHAQIGRLTE 120 Query: 116 VNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATV 174 + ++L L SA RI G+ + V FA+ + +G A + L + Sbjct: 121 PPALDRLVTAAGRLASAERIYCLGLRSCHPVVAQFAYVMSFLGERAVLLDAGAGTGLDPI 180 Query: 175 QASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE 234 ++++ D+LLA S R A G V+A+T + L A + + Sbjct: 181 RSATTRDVLLAASIAPYTRATIETAQYADNQGVPVVAVTDSLVSPLAGVARETIVVPTDS 240 Query: 235 QATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + ++ ++L L + + + IR +EA Sbjct: 241 PSF----FHTVAPAFVVGEVLAALLAGRGGQASLAAIRRTEA 278 >UniRef50_C9XQG1 Phosphosugar-binding transcriptional regulator n=4 Tax=Clostridium difficile RepID=C9XQG1_CLODC Length = 251 Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats. Identities = 56/262 (21%), Positives = 107/262 (40%), Gaps = 21/262 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M R ++ ++ + +Y+ + LS Q LA++ +++V+ +K+ Y Sbjct: 11 MEFYERAKKYEYKFTDTEDMIIEYMRKNKEEIVKLSIQSLADKFFTVPNTIVRLCKKMEY 70 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK L E L ++ + P + I+ TL + E Sbjct: 71 DGFSQLKNNLKEELKNEDKEPKNGFESDIKK---------------------TLELIDYE 109 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 K+++ +++ +R II+ GIG + + + ++ N H +L + Sbjct: 110 KINKVADIIQKSRSIIVYGIGQNIPLCEILVKEIRGGHDNITYYSQRHEVLHDIGKLGEQ 169 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ A+S +G +E+ AA + G KV+A+T N LQQ A LY + + N Sbjct: 170 DMFFALSLSGETKEVIEAAKTAVNKGCKVVALTHICENQLQQIADISLYCYSTIKQVNGY 229 Query: 241 SISACHAQGMLTDLLFIALIQQ 262 +IS M+ + + Sbjct: 230 NISDKVPIMMIMRAIIEQYWLR 251 >UniRef50_C2CZ55 RpiR family transcriptional regulator n=3 Tax=Lactobacillus RepID=C2CZ55_LACBR Length = 263 Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats. Identities = 41/268 (15%), Positives = 97/268 (36%), Gaps = 10/268 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN I+ + L +++ L DY++ ++ S +++A VS ++ ++F +K+G+ Sbjct: 1 MNFFEIIKPYVEKLTKNEYTLLDYVIKHMAEIQNKSIREVAAACFVSTTTFLRFVRKIGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ + + + + + + + E + T+ V E Sbjct: 61 SGYSEFSTVIKYTVLNSDKKADSDVTFVEKQ--------SQYRNEYLKNIEETVRVLDER 112 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 KL + + ++ G S + F ++ + + Sbjct: 113 KLLKICQQMDKHPKLYFYAKGFSKYTTDYIEYLYTLNDFIVIFPKNYEQRKLAYRNIDQN 172 Query: 181 DLLLAISYTGVRRELNLAADEMLRVG--GKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D++ Y G EL + +++ITG N +Q + LY +E N Sbjct: 173 DIIFVFDYEGEDDELIQLIQNLKSNTQFASLVSITGANNNTIQNMSDENLYLFTDELKIN 232 Query: 239 SASISACHAQGMLTDLLFIALIQQDLEL 266 S +++ + ++ +LL ++ Sbjct: 233 SVDMTSHVSLIVIMELLLYQYLEYKKNK 260 >UniRef50_A4EUM4 Putative transcriptional regulator protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EUM4_9RHOB Length = 302 Score = 148 bits (375), Expect = 1e-34, Method: Composition-based stats. Identities = 49/279 (17%), Positives = 90/279 (32%), Gaps = 8/279 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + ++ + L ++ K +A Y+L P LS +Q+A AGVS + + A+ LG++ Sbjct: 14 SVTQSLKAQLPQLPRALKVVATYMLEHPGDIATLSMRQVATNAGVSLPNFARLAKALGFE 73 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGE---KLIKENTAAMYATLNVNS 118 + L+ + + S ++ E K + A + Sbjct: 74 TYSELREVYRKQVQQNDISEYHLRAESLQKSGGDAEARETWGKFRTATMDNLTAVFDSID 133 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKI-GFNAAAVRDMHALLATVQAS 177 + +L +R + + G+ AS + + G D V Sbjct: 134 PDYFASVAKVLNDSRTVYIVGMQASASFSAYAHYIGGMASGKFRLVRGDGGVFADPVADI 193 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 D+++A+S R A KV+AIT + A + L Sbjct: 194 GEGDVMIAVSQQPCARASIELARIARERTAKVIAITDSPAAPIALEADYVLLGPNRSPLF 253 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + +L + L ERI EA Sbjct: 254 ----FESYVGSTVLIEALIGFFTIGQSSRTVERIERIEA 288 >UniRef50_B0NHF5 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0NHF5_EUBSP Length = 280 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 52/276 (18%), Positives = 107/276 (38%), Gaps = 10/276 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L RIR Y L + K +ADYL+ P+ +++ QL+ + S+ ++++F +K+G Sbjct: 1 MDILQRIRDMYPALTKKQKGIADYLMENPEDVCYITLAQLSQQTASSELTLLRFCEKIGC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIR----GDDPLRLVGEKLIKENTAAMYATLNV 116 F LK E S P + + + ++ AA+ Sbjct: 61 SSFLELKNEFREYTQHMIRLLSAPAYFPPENASCERSAKEALLTDICRQEAAAVADFSAS 120 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAV--RDMHALLATV 174 + E + ++ +RRI + S ++ A +L + FNA + D+ + Sbjct: 121 FNPESIVAAAGKIKKSRRIFIFAHDISKILGDFLAARLRLLYFNATLIDLDDLAETQNRL 180 Query: 175 QASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE 234 Q DL++ S+ + A + G +L IT + + ++H L Sbjct: 181 QQLCEGDLVIFFSFPKYYYPMGSIARKAADTGVPILTITDSISSPAAEHSTHLLLCQTST 240 Query: 235 QATNSASISACHAQGMLTDLLFIALIQQDLELAPER 270 + ++ + +LL L+ + + + Sbjct: 241 KMF----YNSLTLPMTILNLLASCLVIDMVPESERK 272 >UniRef50_C2H000 RpiR family transcriptional regulator n=26 Tax=Enterococcus RepID=C2H000_ENTFA Length = 253 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 56/261 (21%), Positives = 99/261 (37%), Gaps = 22/261 (8%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 ++ Q L + + + Y+L + +QLA VS S++++F K+GY GF LK Sbjct: 5 EKVQTLNELEMLVYHYVLEHLHQIPQQTIRQLATSCHVSTSTILRFCNKMGYAGFSELKY 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 A+ E + + +KL +E E L + M Sbjct: 65 AVKEEAKQTQTFENFYDATV-----HVDAFLKKLNQETY-----------YEMLRPAIQM 108 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + AR + TGIG SG++ + + N+ ++ D + + L L +S Sbjct: 109 IVQARHVAFTGIGTSGILGSYGSRYFANLNINSYSIADPFTPIPKRGF--ENTLALILSV 166 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL--YTIAEEQAT--NSASISA 244 +G E+ + G KVL+IT + + + A + + Y E S + + Sbjct: 167 SGETNEMIKQMTDFKTAGAKVLSITNNQHSTIARLADYNISYYMPDERSPFADKSVNTTT 226 Query: 245 CHAQGMLTDLLFIALIQQDLE 265 L +LL Q E Sbjct: 227 QIPVIALIELLAHQASQLLKE 247 >UniRef50_C0CX07 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CX07_9CLOT Length = 293 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 53/255 (20%), Positives = 105/255 (41%), Gaps = 15/255 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN R+ + L ++D + Y+ LS Q++A + ++ ++V++ ++KL Y Sbjct: 43 MNFEERVLRHEDQLNETDDDIVAYIRSHRQEIMKLSIQKIAADLFIAPNAVMRLSKKLEY 102 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK ++ + + + +++ + + + TL+ Sbjct: 103 SGFSELKFSVQNE---------------GEPEGTGKTISGRILGQLPSNIVKTLDTIDVL 147 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + M++ AR I G+G S + L + + + +H + V+ D Sbjct: 148 TLKKTAAMMKKARCCIFAGVGDSTYFCEMLGKNLRCLDCSVQFYQQIHDMFYAVRHGCRD 207 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L+ IS G L A E +G V++IT F N L + LY E++ Sbjct: 208 DMLIIISARGENDRLIEMAGEAKAMGMPVVSITHFYENRLAKACDVNLYFWGEDREVQGY 267 Query: 241 SISACHAQGMLTDLL 255 +++ +L LL Sbjct: 268 NVTDRSGLMVLVRLL 282 >UniRef50_C8NIR7 RpiR family phosphosugar-binding transcriptional regulator n=2 Tax=Lactobacillales RepID=C8NIR7_9LACT Length = 256 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 97/252 (38%), Gaps = 6/252 (2%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 +GL ++K L Y+ + +S +L+ A VS +S+V+ +KLGY GF + K L Sbjct: 5 KGLTNTEKYLLAYIEEHIEEMPSISIVKLSERANVSTASIVRTMRKLGYDGFTSFKHDLK 64 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 + E+ S + + + ++ +N + T+ + + V + Sbjct: 65 KQYRFANENLST-----FKSLEVVDQKIRAVVVKNEQEVRRTIEQLDSRAIEDAVQAIFG 119 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGV 191 A+R+ L G S ++A K + D + + + D+ + IS G Sbjct: 120 AQRVYLFSRGLSEMIASEMEIKFHLLERTCEQYVDPNIIKTISHRLNAQDVAIIISLNGH 179 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY-TIAEEQATNSASISACHAQGM 250 EL AA + ++ +T + L + + +E + + + Sbjct: 180 TEELVEAAKVCQQNEVPIVLVTANGASPLAKLSDITFVGYKSESSYFPDYEVRSRLPLQV 239 Query: 251 LTDLLFIALIQQ 262 ++ +L A + Sbjct: 240 ISRILLDAYAIR 251 >UniRef50_A6M2C0 Transcriptional regulator, RpiR family n=50 Tax=Bacteria RepID=A6M2C0_CLOB8 Length = 249 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 95/245 (38%), Gaps = 19/245 (7%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 + Q L + L Y++ + ++ ++LA+EA VS +++++F +KL +G+ K+ Sbjct: 5 EIIQSLNDLELSLYRYIMKNIEKVVYMRIRELADEAHVSTTTILRFCKKLNCEGYSEFKV 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L L + + I +KL KL+ + Sbjct: 65 KLKLYLEENESTKVNNDTSIIV------DFFKKLDNSELD-----------RKLNVLCDL 107 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 ++ A ++ G G SG++ + A IG + + D + D +++A+S Sbjct: 108 IKKASNVVFIGTGTSGILCKYAARYFSSIGKFSMYIDDPYFPRNYK--LYEDSIIIAMSV 165 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 +G R + + R +++IT + + + + +++ + I+ Sbjct: 166 SGETRTVIDYISNIKRENTTLVSITNSENCTISKISDLNISYYVQQERLGISDITTQIPV 225 Query: 249 GMLTD 253 + + Sbjct: 226 LYIIE 230 >UniRef50_A4JTS2 Transcriptional regulator, RpiR family n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JTS2_BURVG Length = 285 Score = 148 bits (373), Expect = 2e-34, Method: Composition-based stats. Identities = 55/275 (20%), Positives = 101/275 (36%), Gaps = 9/275 (3%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 R+R+ L+ +++KLA LL A + Q A A VS +V++ KLG+ +P Sbjct: 10 DRLRRMLDSLSPAERKLARVLLGNYPVAGLETIAQFAQRAEVSGPTVLRLTTKLGFATYP 69 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 + AL + L + +SP + + + + K+ + TLN Sbjct: 70 DFQQALRDELEDRLQSPILAQRDVLTDSNDP---LVKMSDALVQNLRETLNDLPRATFDS 126 Query: 125 CVTMLRSARR-IILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASSPDDL 182 V++L RR I L G +A +L + N + T+ D+ Sbjct: 127 VVSLLADPRRSIYLLGGRFGYALAVYLRTRLHMLRKNVHLIGGQSSTWPETLVDMGSKDV 186 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L+ +R++ + G +V+ T + + A+H L E + Sbjct: 187 LVVFDARRYQRDIEEFSSAAAARGIQVVLFTDQWLSPIVNVAAHTLIMRVEMPTRWDTA- 245 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 L + L + + + A R+ E L Sbjct: 246 ---VPTLALLEFLLATITDRHWQEARSRLERLETL 277 >UniRef50_A3JGM7 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=A3JGM7_9ALTE Length = 292 Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats. Identities = 52/280 (18%), Positives = 101/280 (36%), Gaps = 5/280 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R+ ++ +++++A Y + S+ LA + G S ++VV+ A+ LG+ G Sbjct: 7 FEDRVNACLGQISPAEQRVARYFQDNREEVLIASASALAKQVGTSDATVVRAAKSLGFTG 66 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 L+ L+ L + + ++ + Sbjct: 67 MEELRRTLAIELRRDTSPAGRLARTLSEVSGDPLSALNVTLDIHQKSLDDLRQNITPSLF 126 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA-SSPDD 181 V + ARRI + GIG S +A+ F+ +L + G +A ++ LLA D Sbjct: 127 QSSVRAIVDARRIFIFGIGPSSAIAEYFSIQLSRFGIDALSLTQTGLLLADGVQKFREGD 186 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 LL +Y V EL + ++ + K + + L+ R L S Sbjct: 187 LLAVFAYGRVYPELTVLLNQAEQCSMKKMLFSDTLGPTLRNRVDLVLPVARG----RSDM 242 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +S A L + L + + + + + L +L Sbjct: 243 LSMHTATLALIEGLLVGVATERPKETIANLESLNKLRTEL 282 >UniRef50_C3RP06 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RP06_9MOLU Length = 261 Score = 147 bits (372), Expect = 3e-34, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 102/267 (38%), Gaps = 14/267 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + + L+QS+ + Y+ PD +S Q+LA S +++++F +KL + Sbjct: 8 MLINQLDDEIIKNLSQSELYILHYVYDHPDEVIDMSIQELAKAVAFSSATILRFCKKLNF 67 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF K AL + + I D + + + + +T + E Sbjct: 68 SGFAEFKFALKQQNKE-----IANLKKPISSMDSITSLYDDI--------ESTSLLIKER 114 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF-NAAAVRDMHALLATVQASSP 179 L E + ++ S +RI L G G S + L IG N + ++ Sbjct: 115 YLKEIIDLIDSNKRIHLYGEGISRIPVDYLEKLLFSIGRQNVYKYKSSRLAAHIASNANE 174 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD+L+AIS +G ++AI+ +T NA+ A+ + Sbjct: 175 DDILIAISTSGNYPTTVKIVKLFNLNHATIIAISPYTKNAIADLANINFRFFVNHRENID 234 Query: 240 ASISACHAQGMLTDLLFIALIQQDLEL 266 ++ A + D++F + + + Sbjct: 235 TEYTSRLAIFYIIDVIFKTYLVRKEKE 261 >UniRef50_A8U8R6 Putative uncharacterized protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8U8R6_9LACT Length = 256 Score = 147 bits (372), Expect = 3e-34, Method: Composition-based stats. Identities = 57/272 (20%), Positives = 107/272 (39%), Gaps = 18/272 (6%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + + Q Y L ++D ++ Y++ + + + +L + S+SS+V+ A+KLG+ Sbjct: 1 MDLEVLVNQHYHELNENDLQIISYIMKHKNECQTMPIVELGQKTHTSKSSIVRLAKKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF K +L + + + ++ D T + ++ Sbjct: 61 SGFSEFKYSLKNDSEQVQRNETQVNFSSMQSLDSQA----------------TSKLFNQT 104 Query: 121 KLHECVTMLRSARRIILTGIG-ASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASS 178 +L + + A+RI G G V +F + + + +A + Sbjct: 105 ELTPILKEIHGAKRIFCYGTGWGQRDVLSDFRRNFVPLEKFFILLSAQRELQMAVASTIT 164 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 DDLL+ +S +G +E + + G +L+IT N L A+H LY A N Sbjct: 165 EDDLLIVLSLSGDIQEAKDEMNMLKLKGVPILSITNLRNNKLASMATHNLYFQATSIPLN 224 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPER 270 I + +TD LF A + ER Sbjct: 225 GEDIFSFLPLFQVTDSLFRAYFDYYQQNKDER 256 >UniRef50_C5BWC4 Transcriptional regulator, RpiR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5BWC4_BEUC1 Length = 335 Score = 147 bits (372), Expect = 3e-34, Method: Composition-based stats. Identities = 55/265 (20%), Positives = 98/265 (36%), Gaps = 1/265 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +R L + + A +++ P A S +LA +GVS +++ + A LGY Sbjct: 38 SPLQALRDALPSLTGALARAAAHIVDAPAEASRGSITRLATASGVSPATLTRLAGLLGYD 97 Query: 62 GFPALKLALSEALASQPES-PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GFPA++ A++ + + I I DDP V L+ ++ A + Sbjct: 98 GFPAMRAAIATEHGREVQGGWQRDIGTAIAPDDPADQVLGVLVAHSSRAARNAMGALDLA 157 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + +A RI L G + +L++IG A P Sbjct: 158 GATRAADWIAAAERIHLYGEWGDSVSLHELYLRLLRIGRPVWFHEGKQATRVAASLLRPG 217 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ +A+S G G + ITG L A L+T E + Sbjct: 218 DVAIALSRAGHDAVGEAFCALAQENGAHTVVITGDPEGPLADVADLVLFTGTREGTAWTD 277 Query: 241 SISACHAQGMLTDLLFIALIQQDLE 265 + + + LL++ + Q+ + Sbjct: 278 YFAGRASDTLTAALLWVLVAQRVPD 302 >UniRef50_Q6MTZ4 Transcription regulator gntR n=2 Tax=Mycoplasma mycoides RepID=Q6MTZ4_MYCMS Length = 278 Score = 147 bits (372), Expect = 4e-34, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 111/261 (42%), Gaps = 7/261 (2%) Query: 21 LADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPES 80 +A+Y+L D+ ++ QLA S +++ +F + L G+ L + + Sbjct: 25 IANYVLSNLDSIEKMTINQLAKATYTSVATINRFVKFLNLDGYKELVHIIK---YFKNSL 81 Query: 81 PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGI 140 I + + + +I T+ + ++ ++ A +I + + Sbjct: 82 QGDQITYSLTSNSLILNAYNNIISSLDETSKLTIEQQDT--IKNLISKIKKALKIAVFAV 139 Query: 141 GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAAD 200 G + +A++F KL++IGFN AV D H + +DL + +SY+G +L A Sbjct: 140 GGTFNIAKDFQQKLLRIGFNITAVNDFHNGYLLANQLNNNDLAIFVSYSGETLDLIKLAQ 199 Query: 201 EMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALI 260 ++ ++ + T N L +++ + + E+ S ++ + DL++I L+ Sbjct: 200 VCIKNNVQIAVVCKATNNTLSNLSNYLINISSNEKIDRLVSTTSRFSLLFALDLIYIFLL 259 Query: 261 QQDLELAPERIRHSEALVKKL 281 DL+ E + + ++ K Sbjct: 260 STDLKNYTELLEKT--MISKF 278 >UniRef50_B5E566 Transcriptional regulator, RpiR family n=10 Tax=Streptococcus pneumoniae RepID=B5E566_STRP4 Length = 269 Score = 147 bits (371), Expect = 4e-34, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 100/259 (38%), Gaps = 13/259 (5%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + I +A ++K +A + L Q SS+ L VS++++ +FA+K G+KG Sbjct: 7 LIPMIEANLPNMAYAEKDIAKFFLKQQP-LNDYSSKALCEYLNVSKATLTRFAKKCGFKG 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F E + + + EK++ + + T V E +L Sbjct: 66 FRQFIFKYQEMIHEKEKLAL------------YTEATEKVLSDYEEMLRKTYTVLDEVQL 113 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 M+ +A R+ L G G+S L Q + M++G + D +L + + + L Sbjct: 114 ERIAEMIETAERVYLYGKGSSVLALQEMKMRFMRLGVIGEVLSDEDMILWSSLLLNENCL 173 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ S +G + + G K + +T + L + + + I Sbjct: 174 VIGASISGQTDIVLEGLQKAADKGAKTVLMTTRKFDEEDCFFDELLLLASTDHLSYGNRI 233 Query: 243 SACHAQGMLTDLLFIALIQ 261 S ++TD LF ++ Sbjct: 234 SPQFPILLITDCLFSNYLE 252 >UniRef50_A5I3B9 Phosphosugar-binding transcriptional regulator n=11 Tax=Clostridium RepID=A5I3B9_CLOBH Length = 245 Score = 147 bits (371), Expect = 4e-34, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 106/259 (40%), Gaps = 17/259 (6%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + + + L +++K + Y+ ++S +A ++ S ++V + +K G +G Sbjct: 2 VIEVNKSIFDSLTETEKTVVKYINSNESNIPNMSIVDVAEKSFTSPATVSRTIKKCGLEG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F L+ +S + +++ ++ + T+ S E L Sbjct: 62 FSELRYKISAK----------------NDYNHDSKKVNEILGKSLIEVTKTIENISVENL 105 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V +++ A+RI + G + LVAQ F KL +G+N + D + + + ++L Sbjct: 106 LKTVRLIKEAKRIYILARGLTELVAQEFNLKLELLGYNTFLIVDPNIMRKICKTLDKEEL 165 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE-QATNSAS 241 ++ S E+ +A+ ++ G K++ + L+ + L + A Sbjct: 166 VIVFSLKIGSPEIVESAESAVKTGAKLITCCCVKNSKLENLSDITLIGYKQSRTAIKEFE 225 Query: 242 ISACHAQGMLTDLLFIALI 260 +++ +++ + LI Sbjct: 226 VTSRLPLFIISRAIIDYLI 244 >UniRef50_Q11LZ5 Transcriptional regulator, RpiR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11LZ5_MESSB Length = 300 Score = 147 bits (371), Expect = 4e-34, Method: Composition-based stats. Identities = 54/287 (18%), Positives = 113/287 (39%), Gaps = 10/287 (3%) Query: 1 MN---GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQK 57 M+ I + L + A Y+L P LS ++ A AGV ++ + A++ Sbjct: 1 MDCATFAAEITRSIGTLPGQLEVAARYVLENPGDVALLSMREQARRAGVQPWTMTRLAKR 60 Query: 58 LGYKGFPALKLALSEALASQPESPSVPIHNQI--RGDDPLRLVGEKLIKENTAAMYATLN 115 G G+ A++ +AL Q + Q+ + + ++ +++ ++A Sbjct: 61 FGLDGYEAVRELHGKALKEQALGFAGRAGAQMARQREAGGPMLAKEIASAAACQIFALGE 120 Query: 116 VNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHAL-LATV 174 + L E + ARR+ G+ +S VA++ A+ L +G A + + L + Sbjct: 121 AGAAHTLFEAAQAMARARRVYCVGLRSSRPVAEHLAYMLNFLGEKAVYLDFSDGVGLDAL 180 Query: 175 QASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE 234 + ++ DDL+ ++ R AA ++A+T + + + A H + E Sbjct: 181 RFATQDDLVFVVTVAPYTRAAVEAARHAHARSLSIIALTDRPASPVARLARHAILVGTES 240 Query: 235 QATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + A ++L + + + A E I +E + L Sbjct: 241 PSF----FHAMAPAFAAVEILAALVAGEGGDAALEVIARTERQLSDL 283 >UniRef50_UPI0001973198 transcriptional regulator, RpiR family protein n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001973198 Length = 325 Score = 147 bits (371), Expect = 4e-34, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 104/283 (36%), Gaps = 11/283 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RI L D+ + DY++ A ++ Q+A +AGVS S+ V+ + +LG++ Sbjct: 45 LEARIAAA--RLTPRDRAVLDYIVKNKKEACFETAAQIAKKAGVSASAAVRVSGRLGFES 102 Query: 63 FPALKLALSEALASQP---ESPSVPIHNQIRGDD--PLRLVGEKLIKENTAAMYATLNVN 117 F K AL L + + +I+ D + + + + N Sbjct: 103 FAQFKRALQAELKRELEGGMKVRPIPYEKIKSYDGLTDEELIGAIRQNALRNIERDQNPG 162 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 +L A R+ L G A A +F L + V + T+ Sbjct: 163 DYGSCSRAADILSEAERVFLVGFRACAGFAASFGVMLSCVRPGVHVVNGSCPTVDTLVDL 222 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 + D + ISY E AA + G +++A+T + + A L E + Sbjct: 223 TGRDAVAVISYDRYSSEAVFAASMARKAGSRIIAVTDRPSSPVCAGAEAILLNSTENLSF 282 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ + M ++L + + E ER++ E + + Sbjct: 283 ----YNSYVSLVMTMEVLTGLMSSRGREQNEERLKKMEEFLTE 321 >UniRef50_Q6LK40 Putative transcriptional regulator n=3 Tax=Vibrionaceae RepID=Q6LK40_PHOPR Length = 280 Score = 147 bits (371), Expect = 5e-34, Method: Composition-based stats. Identities = 54/265 (20%), Positives = 103/265 (38%), Gaps = 9/265 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 I +RY L+Q +++ADY++ QP + +A +A V S++ +FA +G+ G Sbjct: 17 LRDLIVKRYDKLSQRLQQVADYIMAQPMLVAVETMATIAEQANVPLSTLSRFANTMGFSG 76 Query: 63 FPALKLALSEALASQPESPSVPI----HNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 F ++ + ++P + + + + N AM S Sbjct: 77 FSQMQALFRDQYLNRPRDYKERVRQARDQDCFEPESPTSIFQDYGAANIEAMEQLQVSVS 136 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL-ATVQAS 177 +KL V++L A I + G+ + VA + LMK N + D +L + Sbjct: 137 PQKLERAVSLLDKADTIYIQGMRRAYPVAFYLWYALMKSDNNVVLLDDHGGMLAPMTRRI 196 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 S D+L+ I++T E + ++AIT N+ + C E Sbjct: 197 SDKDVLVTITFTPYAPETSELIKLASEKNVPIIAITDNQMNSQGSKMDVCFEVQEGEVM- 255 Query: 238 NSASISACHAQGMLTDLLFIALIQQ 262 + + L L ++L+ + Sbjct: 256 ---GFRSLSSSMYLAQTLAVSLMCR 277 >UniRef50_B4BR41 Transcriptional regulator, RpiR family n=3 Tax=Bacillales RepID=B4BR41_9BACI Length = 248 Score = 147 bits (371), Expect = 5e-34, Method: Composition-based stats. Identities = 54/263 (20%), Positives = 110/263 (41%), Gaps = 18/263 (6%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L R L ++K + Y+ + A+ LS +A + VS +++++ KLG + Sbjct: 3 KLLDRFSNYIGQLTHAEKHVLYYIDGHVEQAKQLSLTAMAEKNNVSTTTIIRMCHKLGLE 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF L+ L DD VGE I+ A M TL+ + Sbjct: 63 GFSELRYILK------------------TIDDQAIPVGENTIERYKADMNQTLDSLERKH 104 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + E ++ A R+++ +G S ++ + F+ L+++ ++ V + H + P D Sbjct: 105 VEEISQLIFEANRVLVVAVGLSKMIGEYFSKLLIQVNKPSSYVYESHIIDLLPNMVQPKD 164 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++ IS +G + + AA+++ + +AIT + L + + + Sbjct: 165 MVIFISSSGETKTIVQAAEKLRFKNIETVAITNSADSTLAKLVRKHISAYVQRVQFAGYD 224 Query: 242 ISACHAQGMLTDLLFIALIQQDL 264 +SA +L D+LF ++ Sbjct: 225 LSARSTLVVLIDILFEFFMKNYK 247 >UniRef50_A9D8B4 Putative uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D8B4_9RHIZ Length = 281 Score = 147 bits (370), Expect = 5e-34, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 97/279 (34%), Gaps = 8/279 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M +++ L ++KK+A L + + +LA AG S +V++F +LG+ Sbjct: 1 MAIREQVQAELGNLPGAEKKIAHAFLANYPSIGLSTIAELAALAGASAPTVLRFVARLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + +P + L + +Q SP + D + + ATL E Sbjct: 61 ESYPDFQRRLRADVQAQLMSPLERARSSGPTTDNPA--LKASFANIAGNLEATLKAVPES 118 Query: 121 KLHECVTMLRSARR-IILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASS 178 + +L +R G + VA A L I + Sbjct: 119 EFETACELLSDSRSACCFVGGRFTDAVAGYMAAHLRIIRPGVRHFGGQTSTWRDQLLDIR 178 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P D+ + + +L + + +++ IT + + + A L + + T Sbjct: 179 PGDVAVLFDIRRYQSDLVRLGELLAERKARIILITDPWLSPIARSARVVLPCVVDADRTW 238 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 +S++ L + + + + A R++ E + Sbjct: 239 DSSVT----LLALAEAMIDRVSRAQAATAGTRMQTLEDI 273 >UniRef50_B9JRN1 Transcriptional regulator protein n=2 Tax=Agrobacterium RepID=B9JRN1_AGRVS Length = 298 Score = 147 bits (370), Expect = 5e-34, Method: Composition-based stats. Identities = 57/274 (20%), Positives = 105/274 (38%), Gaps = 5/274 (1%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 R+++R L+ +ADY+ S+ ++A E G S ++V++ Q LG++G Sbjct: 19 ERLKKRRDQLSPGLLTVADYIDGHRHAVLSKSALEIAFETGTSDATVIRAIQALGFRGLI 78 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 LK L L + +++ A+ A + + L + Sbjct: 79 DLKETLKAYLGETDSPIEKMAATTDDISGNSDAAVDFVLENQQTALAALASPENRAALSK 138 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA-SSPDDLL 183 ++ AR I + GIGASG++A A + GF + A+ LA +L Sbjct: 139 AALLMAEARAIGVFGIGASGIIASYGARLFSRSGFPSYALNTTGISLAEQLLGLGTGHVL 198 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + + + RE E R+ ++ + G + L+Q AS L S ++ Sbjct: 199 VMLLHGRPHREAMTVISEAKRLDVPLILVLGQAESVLRQHASVSLVVP----RAKSEQVA 254 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 ++ + L +AL E E + L Sbjct: 255 LHAPSLVVIETLALALSALKPERTLETLNRLVEL 288 >UniRef50_A7G380 Transcriptional regulator, RpiR family n=1 Tax=Clostridium botulinum A str. Hall RepID=A7G380_CLOBH Length = 179 Score = 147 bits (370), Expect = 6e-34, Method: Composition-based stats. Identities = 53/173 (30%), Positives = 92/173 (53%) Query: 107 TAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD 166 + T + +EKL E V +++A I L G+GAS +VA +F +KL++I +D Sbjct: 2 IDTINDTKELVDDEKLLEAVKAIKNAETIYLYGVGASAMVAMDFQYKLLRINKKVMFQQD 61 Query: 167 MHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASH 226 H LA + D+ +AISY+G RE+NLA +E + G +AIT + L A Sbjct: 62 SHLQLAVSVHITNRDVAVAISYSGNTREVNLAVEEAKKNGATTIAITKCGKSILSNIADI 121 Query: 227 CLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 L + E+ +IS+ +Q +TD LF+ + +++L+ + + ++ LV+ Sbjct: 122 NLNIPSIEKDLRIGAISSRTSQLFVTDSLFLGIAKENLDKTEKNLINTRNLVE 174 >UniRef50_C6VJY7 Transcription regulator n=3 Tax=Lactobacillus plantarum RepID=C6VJY7_LACPJ Length = 243 Score = 147 bits (370), Expect = 6e-34, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 98/252 (38%), Gaps = 18/252 (7%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 + Q L + + ++ Y++ P ++ +QLA+ + VS +++++F + +GY G+ K Sbjct: 5 DQVQQLKRLEIEIYKYIVGHPAEVSTMTIRQLADHSHVSATTILRFLKHMGYDGYAEFKF 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L E L P P+R +++ + A KLH + Sbjct: 65 TLKEQLRQDATQPLAQTVV------PMRTFFDRMNLPDITA-----------KLHRVAEL 107 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + AR ++L G G S +A + G + + D Q D + A+S Sbjct: 108 VHQARMVVLIGSGTSAGLAAYGSHLFANFGLYSLMISDTSQPHPVQQQDLSDTVFFALSV 167 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA-TNSASISACHA 247 +G ++ + + G KV+AIT + + L A L E + S + Sbjct: 168 SGESEDIIEQSVYYRQSGAKVVAITASSHSTLAGIADVVLTYDTPEVQAISGGSTLSQLP 227 Query: 248 QGMLTDLLFIAL 259 + L + + Sbjct: 228 VVYYLEQLAMII 239 >UniRef50_D1B967 Transcriptional regulator, RpiR family n=2 Tax=Synergistaceae RepID=D1B967_THEAS Length = 288 Score = 147 bits (370), Expect = 6e-34, Method: Composition-based stats. Identities = 52/278 (18%), Positives = 104/278 (37%), Gaps = 9/278 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + R + +++ +YLL A S +A + VS++ +V+ A+ LG++G Sbjct: 6 LQALMMDRIDSMPNKARRVVEYLLSNMREAAFRSIGDVAEDLKVSKAQLVRVARMLGFEG 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + LK AL A+ Q P + + + + + K A + T S Sbjct: 66 YSELKDALQRAILEQ----VNPAAMLAKVSNSEDSLPDTIYKMEHANLDDTWTQMSAASS 121 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQASSPDD 181 M+ A I G G S +VA++ +L + N+ ++ L V+ + D Sbjct: 122 ASFCQMVTEANNIYCLGWGISSMVAESLQVRLRVMNLNSFLLKRGTLTLHEQVRVAREGD 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 LL+ E+ + + G ++++IT + + A L+ A Sbjct: 182 LLVVCELPSYVVEVTESVEIAHSNGCRIISITDSPAAPVCRFADLSLFVSASSPTFG--- 238 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S+ L +L L + + A + + + Sbjct: 239 -SSIIGPLFLVHVLTSILAIRMGDRAKKALEEQARFLH 275 >UniRef50_C2HQZ9 Transcriptional regulator n=2 Tax=Lactobacillus acidophilus RepID=C2HQZ9_LACAC Length = 277 Score = 147 bits (370), Expect = 6e-34, Method: Composition-based stats. Identities = 66/269 (24%), Positives = 109/269 (40%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 Q L S+K++A YLL Q LS+Q+L S+ +V++F +KLGYK F Sbjct: 7 QNETNLTNSEKEIARYLLNQNLDLATLSAQKLGELTFTSKPTVLRFIKKLGYKKFNEFCY 66 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L +S + H I D L + K+ A+ T ++ +E L+ V Sbjct: 67 DLISEQERIKKSRDLLKHININKDSNLSDLLIKVPNLYNQAINRTNSLMDQENLNLIVKK 126 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 L + I G G + +AQ ++K IG +++ T + IS+ Sbjct: 127 LNTLDYIDFYGSGITEGLAQIGSFKFSSIGKFGGVYSNVNEHYLTSIHGINKHGAIIISF 186 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 TG + + AA ++ ++ L I G L+ S L E + SI A Sbjct: 187 TGGNKAMINAAKDLKKLNIYSLGIGGLENEELKNNCSSYLTIPFENLSLGMESIVPSVAI 246 Query: 249 GMLTDLLFIALIQQDLELAPERIRHSEAL 277 + D+LF +L ++L + L Sbjct: 247 NYVIDILFTSLTIKNLSQNVTNALKVKNL 275 >UniRef50_A6M2I0 Transcriptional regulator, RpiR family n=3 Tax=Clostridiales RepID=A6M2I0_CLOB8 Length = 248 Score = 146 bits (369), Expect = 7e-34, Method: Composition-based stats. Identities = 45/266 (16%), Positives = 100/266 (37%), Gaps = 21/266 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I + Y+ L +SD + Y+L + +S Q+LA++ VS +++++F KLG Sbjct: 1 MKLETLIDENYEKLNESDLYIWKYILHHKKECQTMSIQELASKCNVSHTTILRFTHKLGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +G+ +K+ L + K I++ + T+ + E Sbjct: 61 QGYSEMKIHLKWEDKQRNSFD------------------NKEIEKTYKDIEKTMEIMKER 102 Query: 121 KLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++ ++ A +I + G GA A++ ++ + + A S Sbjct: 103 DFYDVFELVEKADKIYVYGSGAVQKNAAKDLKRSMIFGNKLIYVIEGREETNIILDALSS 162 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+ +S +G +N A ++ K+++IT N L + L + Sbjct: 163 KDIFFLLSLSGNNLFMNEFAQKLKEKDVKIISITQVGNNELASISDISLQFYTHPISVGE 222 Query: 240 ASIS--ACHAQGMLTDLLFIALIQQD 263 + ++ +L + ++ Sbjct: 223 NKTKLYSTTQFFLINQILLLKYLEYR 248 >UniRef50_A4AG13 Putative uncharacterized protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AG13_9ACTN Length = 302 Score = 146 bits (369), Expect = 7e-34, Method: Composition-based stats. Identities = 48/284 (16%), Positives = 109/284 (38%), Gaps = 10/284 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 ++++ ++ L+ ++++++ L+ A +LA A VS +V++ KLG Sbjct: 7 LAEQLKKEHESLSPAERRVSRVLIADYPVAGLEPVHRLAERANVSAPTVLRLISKLGIGS 66 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAA----MYATLNVNS 118 +P ++ L + ++ + SP + P G K + ++ + AT N Sbjct: 67 YPQMQKLLRQEISVRTSSPLEMYGERSASTTPGTQSGIKFVADSKRVLAEGLDATFNAIP 126 Query: 119 EEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA- 176 E ++ E ++ + R RI G S L+AQ L + + V A Sbjct: 127 ETEIIEIAKLIANPRNRIWTVGGRFSDLLAQYLTLHLRLLRKDVNHVDPTEQEKAFTLLD 186 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 + D+L+A Y + + T + + A + L + + Sbjct: 187 FTSRDVLIAFDYRRYQGGTVSFLKNAKNKKATTVLFTDPWLSPAAKHADYLLSSSVTSPS 246 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + L + + ++++ + +RI+ +AL +K Sbjct: 247 ----PFDSLTSGFALVETVIAGVVEELGDSPTQRIQAFDALQEK 286 >UniRef50_Q46SK2 Transcriptional regulator, RpiR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46SK2_RALEJ Length = 313 Score = 146 bits (369), Expect = 7e-34, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 101/280 (36%), Gaps = 8/280 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + +I L +S+++LA L S+ +LA +AGVS+++ +F ++LGY+ Sbjct: 35 SLQDKILALNDQLTESERRLAAVTLECIGNLAAYSATELAQKAGVSKATAGRFFRRLGYE 94 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F ++ + + + + + + + + T + + Sbjct: 95 NFNEVRALVRDEADRGSPLYELAGVQAPTENQTP---LARHLANDLQNLAQTFDRLNPAD 151 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSPD 180 + V + +R+ + G ++AQ L ++ V L + Sbjct: 152 VERAVALFADTKRVFIAGFRNGRVLAQYAWALLTQLRPGVTLVPGAGLNLAEDLADLGAG 211 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+LL + + L RVG KV+ +T + L R+ L +A Sbjct: 212 DVLLVMDFRRRVTLLWPMVAHANRVGAKVVILTDPSATDLPARSDVVLRC----VNHGAA 267 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + A L + L L + A ER+ E+L Sbjct: 268 VFDSYVAAVSLINHLCTNLALVLGDTARERLEEIESLHDH 307 >UniRef50_C3RJI4 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RJI4_9MOLU Length = 252 Score = 146 bits (369), Expect = 7e-34, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 99/262 (37%), Gaps = 20/262 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + Q Y L ++D + Y+L +S +L+ +S++++ +F+QK+ + Sbjct: 1 MQLEELVNQYYDDLNENDLMIWKYILAHKKECCEISIDELSKRCNISRATISRFSQKISF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GF K+ L + +++ +M T + Sbjct: 61 EGFREFKMRLKLECQQVQVKN--------------DGMLDEICNNYLKSMELTKDS---- 102 Query: 121 KLHECVTMLRSARRIILTGIG-ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 L + + ARR+ + G G VA+ ++ + L T+ Sbjct: 103 DLDDLFEHIHHARRLFVFGTGETQNTVAEMIKRVFLQTKVFFVTLYGKSELKMTINGLGE 162 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE-QATN 238 D+++ IS +G A + G +++IT N L + A LY I ++ + N Sbjct: 163 QDVMIFISVSGENEMAIEAMKTLKNKGTYIVSITKLNNNTLARLADKSLYVITDQYKRFN 222 Query: 239 SASISACHAQGMLTDLLFIALI 260 + + A ++LF+ + Sbjct: 223 NRTYETTSAYFNTVEILFLKYL 244 >UniRef50_B7QPC3 Transcriptional regulator, RpiR family n=4 Tax=Rhodobacteraceae RepID=B7QPC3_9RHOB Length = 290 Score = 146 bits (369), Expect = 7e-34, Method: Composition-based stats. Identities = 57/279 (20%), Positives = 98/279 (35%), Gaps = 7/279 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 IR +Y L QS+KK A+ LL A S +A+ A VS +V + QKLG+KG Sbjct: 8 VRELIRDQYSALTQSEKKFANALLANYPAAGLASITIVASNAEVSTPTVARMVQKLGFKG 67 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 +P AL + L ++ P+ N P + + + T + T + E+ Sbjct: 68 YPQFHQALLKELEAKGSGPTQRRANWASE-APEGHLLNRFAQAVTENLSQTFSNVDSEQF 126 Query: 123 HECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQASSPD 180 V L + R+ + G + +A I + V Sbjct: 127 DAAVRQLANTEGRLYVVGGRITRALADYAFTHFQAIRQRVTHMTSSSATWPHYVLDMVEG 186 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D LL L A+ G V+ IT + + A+H E + Sbjct: 187 DTLLMFDVRRYETNLQRLAELAAERGVSVILITDQWSSPINSVAAHTFNCWVEIPS---- 242 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + + + ML + + A ++ + R + + Sbjct: 243 AWDSNISTMMLLEAMISAAQEERWDETRARYEKLDTIFD 281 >UniRef50_A8RA11 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RA11_9FIRM Length = 248 Score = 146 bits (369), Expect = 8e-34, Method: Composition-based stats. Identities = 52/255 (20%), Positives = 113/255 (44%), Gaps = 14/255 (5%) Query: 8 RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALK 67 + Y+ L++++K + +L + ++S +A + SQS+V + QK GY+G L+ Sbjct: 7 KTIYEKLSEAEKGVIQFLNQNEEKIPYMSITNIAEKTFTSQSTVSRTIQKCGYQGISQLR 66 Query: 68 LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 A+S+ + S ++ ++ T++ S + + + Sbjct: 67 FAISQQEQMKNHHESSYG-------------VNNILSKSYRESTKTIDNISPVAMLQTIE 113 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAIS 187 +++A+RI + G + L+A+ F L +G+NA V+D+ + T + + +D++ +S Sbjct: 114 FMKTAKRIFIFSRGFTALIAEEFQMYLQLLGYNAIIVKDVKWMENTERIVNTNDVVFILS 173 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI-SACH 246 EL +A R G KV++ +P L+ + +Y +E+ S + Sbjct: 174 VRNTTPELATSARAAKRKGAKVISCCCKSPCELENFSDIIIYGHSEQIMKASGMTVYSRI 233 Query: 247 AQGMLTDLLFIALIQ 261 ++T + L Q Sbjct: 234 PLLIITRTIIEYLGQ 248 >UniRef50_A1WR14 Transcriptional regulator, RpiR family n=25 Tax=Burkholderiales RepID=A1WR14_VEREI Length = 334 Score = 146 bits (369), Expect = 8e-34, Method: Composition-based stats. Identities = 58/269 (21%), Positives = 103/269 (38%), Gaps = 11/269 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L I Q Y+GL++ K ++ ++ D Q +A + GV S++V+FA+ G+ G Sbjct: 40 FLQCISQEYEGLSKQLKAISRHVEAHRDHLGLQGIQSVAEQCGVQPSAMVRFAKHFGFSG 99 Query: 63 FPALKLALSEALASQP---ESPSVPIHNQIRGDDP---LRLVGEKLIKENTAAMYATLNV 116 F ++ E LA Q + ++ + + I + ++ IK + A M Sbjct: 100 FSEMQRLFREGLAEQIAPGRAYNLRLRDVIEAGSTSLQSPQIADEFIKGSIAGMQQLRQE 159 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQ 175 ++ V +L + I + G S VA + L + ++ Sbjct: 160 LDQQAFARAVELLADTQAIWIAGSRRSFPVAVYLDYALQHTEKRIGLLNALGSMQQGQIR 219 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 + D+L+AIS+ E A + + G +V+AIT L + A L Sbjct: 220 SVRAGDVLIAISFNPYAEETLQVAQQATQRGARVIAITDSRMGPLARTAEATLIVQDSAT 279 Query: 236 ATNSASISACHAQGMLTDLLFIALIQQDL 264 A A L LF+AL + Sbjct: 280 F----GFRALTATMGLAQSLFVALAYRLE 304 >UniRef50_C2BN80 RpiR family transcriptional regulator n=1 Tax=Corynebacterium pseudogenitalium ATCC 33035 RepID=C2BN80_9CORY Length = 284 Score = 146 bits (368), Expect = 8e-34, Method: Composition-based stats. Identities = 54/284 (19%), Positives = 110/284 (38%), Gaps = 8/284 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + +I ++ L+Q++K A LL + Q A +A VS +++V+F Q LG+K Sbjct: 4 SITEQINSKFPSLSQAEKDAARCLLNSYPWVGLKTVQHFATQANVSSATIVRFVQTLGFK 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRG--DDPLRLVGEKLIKENTAAMYATLNVNSE 119 GF + AL E + + SP + +D L + + AT + Sbjct: 64 GFKQFQNALMEETSEREASPLTQAGDDFTNSANDLLAQTLNQTADAFLRGIEATFKYAQD 123 Query: 120 EKLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKI-GFNAAAVRDMHALLATVQAS 177 E + V + + R I++ G+ S ++AQ+ +L G A+ L+ + + Sbjct: 124 EDFEKVVALFSNQERRIVSHGGSFSWVLAQHLVAQLSLFRGKQIASPLSDLPLIELIYQT 183 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 S +D+ + + + A + G V+ +T + + + L E Sbjct: 184 SANDIWVFFDFRRYSPQSEQIARLVKGNGAAVVLVTDRWMSPISSYSDVSLVARVE---- 239 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 L + + + ++ + + + E L K+L Sbjct: 240 AFGPSDTLVPAFALVEAICECVSRKIGKAGIQYLEAFEVLRKEL 283 >UniRef50_A6LZ63 Transcriptional regulator, RpiR family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LZ63_CLOB8 Length = 288 Score = 146 bits (368), Expect = 9e-34, Method: Composition-based stats. Identities = 50/270 (18%), Positives = 120/270 (44%), Gaps = 7/270 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + +I R + L S+ ++A++++ + + + +A E VS++S+ +F +K+G+KG Sbjct: 8 VIAKIISRQKNLTFSENEIANFVINNAEFVINNTITNIAIETKVSETSINRFCKKIGFKG 67 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F K+AL++ + + + + + + + T ++ +E L Sbjct: 68 FNDFKIALAQDNFYRNLKANDKSR-------DNNSLIDSIASDYNELILNTCSLINEMDL 120 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V M++SA+++ + + S A +L +G A + D++++ SS DDL Sbjct: 121 IKVVEMIKSAKKVNIFSVFGSWQSAIELKQRLNMMGIKAESYNDVYSMKLCSANSSQDDL 180 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ I+ R++ + K++ IT + L + + T + N+ I Sbjct: 181 IIGITRNISVRDIQEPLISGRQNNAKIVTITSYDSPKLSELTDIKIITSDKLAIENNTVI 240 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIR 272 S D++ LI+ + + +++ Sbjct: 241 SDNMTFLFTIDVIVGMLIKSNKKYLQKKLD 270 >UniRef50_Q16A62 Transcriptional regulator, RpiR family, putative n=4 Tax=Rhodobacteraceae RepID=Q16A62_ROSDO Length = 285 Score = 146 bits (368), Expect = 9e-34, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 98/280 (35%), Gaps = 10/280 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M +I Q + ++KLA +L A S Q LA + VS S+ +F K+G Sbjct: 4 MQIRYKIEQASDTFTKGERKLAAAILSDYPYAGLSSIQDLAKRSEVSAPSISRFMTKIGL 63 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ AL L P+ + + + +A M + +EE Sbjct: 64 SGYQEFHRALIAELKDGDR---SPVEMHVGDRHIEGDYLSDFLAKASAQMAIAGDAITEE 120 Query: 121 KLHECVTMLRSARR-IILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASS 178 + + +L + + I + G S +A + ++ L + + D + Sbjct: 121 QFNRVCALLANPKHSIYVIGGRISDTIAAHLSFHLRQARRGVYHLPSDPETWPEYLLRMK 180 Query: 179 PDDLLLAISYTGVRRELNLAADEML-RVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 D+ + + ++ L A G +V+ +T + + + AS L E Sbjct: 181 GGDIFFVVDFRRYQKALASLAGLARNERGARVVVMTDKWISPVARHASDVLPVPIESGTL 240 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + +T+ + + + + +RI + L Sbjct: 241 WD----TYSSALAITEAIVTRIAEDNWAHTKDRIESWDKL 276 >UniRef50_B8H4I3 Transcriptional regulator IolR n=2 Tax=Caulobacter vibrioides RepID=B8H4I3_CAUCN Length = 291 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 107/277 (38%), Gaps = 11/277 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 I +RY L++ +++A Y+L +P+ + ++ GV S++V+FA+ GY G Sbjct: 17 LRSAILERYDSLSKRLQQIARYVLDEPNELALETLAVISERCGVQPSAIVRFAKTFGYPG 76 Query: 63 FPALKLALSEALASQP------ESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNV 116 ++ + L S E V + ++ NT A+ Sbjct: 77 ASQMQRLFRDGLLSGHAGLGYSERVRHFNEAVAMTPQGGADVLAEFVEGNTLALQNLGQT 136 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQ 175 S + + V+++ A + + G S VA A+ L + + VQ Sbjct: 137 VSAADMAKAVSLIDKAETVYVAGFRRSFPVASYLAYSLQQANKRTLFIDGVAGLTKQQVQ 196 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 P DLL+A+SY E +AA+ + G K+L+I+ + + + A L+ E Sbjct: 197 TIGPKDLLIAVSYHPYAEETVMAAEMATQRGAKILSISDSLVSPIAKPAELVLHVRESEV 256 Query: 236 ATNSASISACHAQGMLTDLLFIALIQQDLELAPERIR 272 + + A L L I + + + + Sbjct: 257 R----TFRSLAASICLAQALVIGFAFEAGKEERKAQK 289 >UniRef50_B9K550 Transcriptional regulator n=1 Tax=Agrobacterium vitis S4 RepID=B9K550_AGRVS Length = 313 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 55/284 (19%), Positives = 104/284 (36%), Gaps = 10/284 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M RI L+ + +++ADY+L P + +++LA VS +V +FA+ LG+ Sbjct: 13 MPMSQRI--IQATLSPAHRQIADYVLDYPLRVAAMRAEELAEIVHVSVPTVNRFARALGF 70 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ + L +P + + + V + T + T E Sbjct: 71 AGYAQFRADLVLGY-ETALAPVEKLQRRSQAATSPADVFANNLAMITRNIERTHQALDTE 129 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAA---VRDMHALLATVQAS 177 L + ++ SARRI + G+G+S + + + V ++ Sbjct: 130 TLSRAIGLILSARRISIIGLGSSAWLGGLMQRRFDLFCDDVRLLATVEGASFAARALRNV 189 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 DL++AI++ + A M G VLA+T + L A+ L+ E Sbjct: 190 RAGDLVIAIAFPRYMADTVTLAKRMRDAGADVLALTDNASSPLVAHATMTLFAQVESDYF 249 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S + L + L A+ + + ++ L Sbjct: 250 ASCE----ASALALIESLSAAVSYASGRSMQAATQLVDTVLPYL 289 >UniRef50_D1P280 Transcriptional regulator n=5 Tax=Enterobacteriaceae RepID=D1P280_9ENTR Length = 250 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 54/251 (21%), Positives = 109/251 (43%), Gaps = 14/251 (5%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 + Y L S+KK+ YL +L+ +L + VS++ ++ +QKLG+ GF LK Sbjct: 6 KNYDNLTVSEKKVLKYLTDNIADIPYLNINELVAKTFVSKTVIINLSQKLGFSGFKELKF 65 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 ++ + SQ ++ + + + ++ T + +EE++H+C Sbjct: 66 QINNHILSQNKAEKKNPASYKKQLE--------------NNIHKTFTLINEEQIHDCAKT 111 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 LR +R I + G S V L +G + + D + + + + DD ++ IS Sbjct: 112 LRHSRNIFIVARGTSKAVGYYLEHLLFSLGLHCFFINDYNLSDSFTRLVNKDDTVIFISL 171 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 +G +++ A + ++++T F N L +++ L+ A+ T + Sbjct: 172 SGGTKKIIETAKIVQLKDANIISMTAFHTNELTAYSTNSLFCFADSYDTKRDDSKSRTGF 231 Query: 249 GMLTDLLFIAL 259 +L DLL L Sbjct: 232 FILVDLLINEL 242 >UniRef50_Q5WBH0 RpiR family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WBH0_BACSK Length = 287 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 59/281 (20%), Positives = 118/281 (41%), Gaps = 7/281 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L +++ L +S K + DY++ ++ QL+N G S ++V++ +GY Sbjct: 3 NPLEVLKESAGSLPRSQKLVVDYMIDHYSEVGFMTVGQLSNNVGTSTTTVMRLMSNIGYS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ A + +L L + N + + + +N E Sbjct: 63 GYSAFQKSLQAHLKEEAAPQIRLEKNLKNLSHNESWL--HHYELQLEQIQKANQLNVETN 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMK-IGFNAAAVRDMHALLATVQASSPD 180 L+E V ++ SA +I T + + VAQ L + +G + D + V + + + Sbjct: 121 LNEAVKLICSASQIYCTSVRSGLPVAQYLTHNLNRMLGNTKLTLADSSDWVDDVISFTEN 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DLL+ +SY L A++ + G VLAIT + L A A+ + A Sbjct: 181 DLLIVVSYARYGERLLHYAEQAKKKGASVLAITDKFSSPLSAYADLVFACPAD----SIA 236 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S ++ + + D L +L + E +R++ ++++ ++ Sbjct: 237 SHNSIVSSIFIVDYLIGSLSLEKTEYISKRLKEVDSILTQM 277 >UniRef50_B5I710 Transcriptional regulator n=6 Tax=Streptomyces RepID=B5I710_9ACTO Length = 307 Score = 145 bits (367), Expect = 1e-33, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 98/274 (35%), Gaps = 14/274 (5%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 L+ +++A YL+ A LS LA+ GVSQ SV +FA +G+ G+PAL+ L Sbjct: 37 RPRLSPGQRRIAQYLIEHITEAAFLSITDLADRVGVSQPSVTRFAAAVGFSGYPALREKL 96 Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN-SEEKLHECVTML 129 Q + + D+ + + + +++ E L Sbjct: 97 ------QAIALGTLAGGPVADDESRGNELQAAVDAEIENLENLRRDFADPDRVIELGRKL 150 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD---DLLLAI 186 + + + G+ S +A+ FA+ +I + V ++ S + +LA Sbjct: 151 SESTPLTILGLRISASLAEYFAYAARRIHPDVRLVTRGGSVAYDALLQSREAGGTWVLAF 210 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S +E A G K+ +T + A T + + Sbjct: 211 SMPRHAQETLTALRVARSAGLKIALVTDLALGHVADEADVLFSTGTGSRLV----FDSYA 266 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A G++ L A+ D E R+ E + + Sbjct: 267 APGVIAAALLQAMTDADPERTQARLEEYEQISDQ 300 >UniRef50_A1B8L9 Transcriptional regulator, RpiR family n=3 Tax=Alphaproteobacteria RepID=A1B8L9_PARDP Length = 305 Score = 145 bits (367), Expect = 1e-33, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 108/277 (38%), Gaps = 8/277 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RI ++ + ++ A ++L PD +S ++LA AGV S++ + A+ LG+ G Sbjct: 22 LRDRIIGTFESMPPQLQQAARHILEHPDEVALVSMRELARNAGVQPSTMTRLAKFLGFAG 81 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + ++ ++A+ + Q R + ++++ + + S +L Sbjct: 82 YEDIRAHHAQAIRLR---VDGFAAQQERASTSDEGLAQQMLHSLSLQIARLGEPASIARL 138 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA-SSPDD 181 L ARRI + G+ + LVA +F + + +G + + + D Sbjct: 139 EAAAERLARARRIYVLGLRSCHLVAWHFHYVMTLLGERTEHLDGPAGTVGDGLMRAGAKD 198 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +LLAIS R A G V+AIT + L A + E Sbjct: 199 VLLAISINPYARHSLELAQLAREKGMGVVAITDSEVSPLNGVADEVILCATESPTF---- 254 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++++L L +D A E ++ ++ + Sbjct: 255 FHTLAPALAVSEVLCGLLANRDRAAALEALQKADRHL 291 >UniRef50_C9M9F8 Transcriptional regulator, RpiR family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M9F8_9BACT Length = 289 Score = 145 bits (366), Expect = 1e-33, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 104/272 (38%), Gaps = 8/272 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +R R + +++ ++LL A L+ +A E VS++ +V+ A+ LG+ G Sbjct: 6 LQEVLRARLENSPPKARRVVEFLLSHMREAAFLTIGDVAGELNVSKAQLVRVARMLGFGG 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + LK A+ E + Q ++ + + ++ + A + T N + Sbjct: 66 YSELKAAIQETVLEQVNPAAMLNRAL---SENESALAARIHQMEHANLEDTWNRLDPANI 122 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQASSPDD 181 + ML +A I G G S + ++ +L ++G + ++ L+ V+ D Sbjct: 123 KKFSAMLLAADSIFCAGWGISAMTSECLFSRLRELGLKSFTLQPGCLTLIEQVRCLDSRD 182 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L+A L + + G K++ +T + + A + Sbjct: 183 VLIAFDLPSYALLLTESVARAKQAGAKIITVTDSPAAPICKMADLSFFVSDSSPTFG--- 239 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRH 273 S+ L +L AL + + A + + Sbjct: 240 -SSLIGAVFLIHVLTSALSVEMGDRARKALEE 270 >UniRef50_C5EFX0 N-acetylmannosamine kinase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EFX0_9FIRM Length = 290 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 60/261 (22%), Positives = 119/261 (45%), Gaps = 6/261 (2%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 R+ +Y L + KKLA+Y+L D S L+++ G++ S++ +F Q L Y GF Sbjct: 21 SRLSSQYSFLPKQQKKLANYILNHQDEVIRSSITMLSHKTGIAASTITRFCQSLSYSGFS 80 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 +K ++S+ + S + I+ D + ++ +KL+K ++ +T+ ++L E Sbjct: 81 EMKFSMSKKVLSNND------EALIQKGDSINVIAKKLLKSSSECFASTMRTIDLKQLEE 134 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 + +L SA I + G +S A LM G A D + +P+D+ + Sbjct: 135 VIHILMSAHNIHIYGQSSSYCSASYAQQMLMLSGLLGQAYNDTVNMNIVAHLLTPNDVAI 194 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 ++Y+G R +N A G K++ IT + + + A + LY E Sbjct: 195 GMAYSGESRNVNSALAIAKENGVKIVVITSAPYSTMAKLADYVLYYSHEIPDDIHYMFLP 254 Query: 245 CHAQGMLTDLLFIALIQQDLE 265 + ++ ++ +++ QD + Sbjct: 255 NLCEIIIWGIIQSSILLQDSK 275 >UniRef50_C9NY46 Predicted transcriptional regulator of the myo-inositol catabolism operon n=2 Tax=Vibrio RepID=C9NY46_9VIBR Length = 281 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 54/265 (20%), Positives = 105/265 (39%), Gaps = 9/265 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R+ +RY L+Q +++AD+++ QP + +A +A V S++ +FA +G+ G Sbjct: 18 LRDRVVKRYDRLSQRLQQVADFVMAQPMLVAVETMATIAEQANVPLSTLSRFANTMGFSG 77 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGD----DPLRLVGEKLIKENTAAMYATLNVNS 118 F ++ E ++P + D D V + N A+ S Sbjct: 78 FSQMQALFREQYLNRPRDYKERVRQAREHDDMASDSPAAVFQDFGHANVEAIEQLQIAVS 137 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL-ATVQAS 177 +KL + V++L A I + G+ + VA + LMK N + D +L + Sbjct: 138 PQKLEKAVSLLDEAETIYIQGMRRAYPVAFYLWYALMKSDNNVVLIDDHGGMLKPLTKRM 197 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 + D+LL +++T E + + ++AIT + C E Sbjct: 198 NKKDVLLCVTFTPYAPETSELVENAHEKQVPIVAITDNQMTENGSKYDVCFEVKEGEVM- 256 Query: 238 NSASISACHAQGMLTDLLFIALIQQ 262 + + L L ++L+ + Sbjct: 257 ---GFRSLSSSMYLAQTLAVSLMCR 278 >UniRef50_P54717 HTH-type transcriptional regulator glvR n=4 Tax=Bacillus subtilis group RepID=GLVR_BACSU Length = 254 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 59/272 (21%), Positives = 105/272 (38%), Gaps = 23/272 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I Q Y L +D + Y+L T HL LA VS+SS+++ AQKLG+ Sbjct: 1 MQLEELINQHYSKLNDNDFHILKYILNHKHTCYHLGIDALAKACSVSRSSILRLAQKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ ++ L ++ + EKL+ + A + + Sbjct: 61 SGYSEFRVFLKWEDQ---------------PEEGESMSFEKLLDDIEANLKFLR----TK 101 Query: 121 KLHECVTMLRSARRIILTGIGASGLV-AQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + + ++ +A RI + G G + + A++ + + D + Sbjct: 102 DMTDMCQLIDAADRIFVYGSGNAQKICARDLQRMFIPRHRYLILIEDTNEFNLMRDDFKV 161 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +DL + IS +G EL A + G ++IT N L Q H LY ++ + Sbjct: 162 NDLFIIISLSGETPELIPQARMLSAKGIPFISITNLKNNVLAQLTPHNLYATSKPVTLSD 221 Query: 240 -ASISACHAQGMLTDLLFIALIQQDLELAPER 270 I A ++ + LF A + D + A + Sbjct: 222 RTEIVAFAPFFLVGEALFRAYV--DYKEAEKN 251 >UniRef50_B6QWT3 Putative transcriptional regulator protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QWT3_9RHOB Length = 292 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 49/281 (17%), Positives = 104/281 (37%), Gaps = 7/281 (2%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 + ++ + Y L++ KK A Y+L P LS +Q+A A V ++ + A+ L + + Sbjct: 9 IDQLTKAYPNLSKQLKKSAAYVLEYPSDVATLSMRQVAARAEVPPPTMNRLAKSLEFDTY 68 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGD--DPLRLVGEKLIKENTAAMYATLNVNSEEK 121 A++ + + + + + + Sbjct: 69 NAMRDVYRGGFEDFSSNYPSRAGELQATHGTSDIEASLQSFKSAAIGNLKHLFDTIDRDH 128 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSPD 180 L + ++ L +AR +++ G+ AS +A + N + + V+ + D Sbjct: 129 LQQIISSLATARNVVVVGMHASHSLANYLHYVASMCFRNWRLINRRNGEIADQVEYINAD 188 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++AIS + L A VG KV+ IT + L ++ L T + Sbjct: 189 DVVVAISLNPCAADTVLVAKRAYEVGAKVIGITDTRTSPLATYSTDLLLTPVQSPHF--- 245 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + A L +++ L+ ++ + I E +L Sbjct: 246 -FESYVATAALLEMILGFLVADSGQVVIDNITRLERCRNEL 285 >UniRef50_C6VQQ2 Transcription regulator n=4 Tax=Firmicutes RepID=C6VQQ2_LACPJ Length = 237 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 104/252 (41%), Gaps = 20/252 (7%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 ++ + ++D ++ Y++ D ++S ++LA+E VS S++++F K G++G+ K Sbjct: 5 EQLEKYNETDVEIYRYVINNMDRVGYMSIRELAHELHVSTSTILRFCLKNGFEGYRDFKR 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 AL + + K N++A E KL +T Sbjct: 65 ALKSEQQQLTTY---------EPKSDVSELAHFFAKTNSSAY--------ERKLMPALTY 107 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 LR A +I GIG+SG +++ A G A + D + + + D ++ A+S Sbjct: 108 LRRATLVIFVGIGSSGSLSRYAARCFTNAGKVAFGLEDSNYPVNAFEI--HDTVVFALSE 165 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSASISACHA 247 +G EL + VL+IT + + L + + A ++ + +I+ Sbjct: 166 SGETPELIALVQYFQQRRCAVLSITNQSQSTLAKLSDWNFSYQLAHQRINGNYNITTQVP 225 Query: 248 QGMLTDLLFIAL 259 + + L L Sbjct: 226 VVYVIETLAKRL 237 >UniRef50_B1QZ16 Transcriptional regulator, RpiR family n=2 Tax=Clostridium butyricum RepID=B1QZ16_CLOBU Length = 246 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 39/255 (15%), Positives = 106/255 (41%), Gaps = 20/255 (7%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 ++ + L + ++ +Y++ D L+ ++LA VS +++++F +K+ +GF K Sbjct: 5 KQIESLNDLELRVYEYVIKNHDRVLKLTIRELAKNIHVSTTTILRFCRKMDCEGFHEFKY 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L + +A + + + + + + N + +K+ + + Sbjct: 65 KLKDQIAETDKDFKLNTDDY--------AIIDYFERSNQPS--------EVQKILDATKI 108 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + +++II GIG SG++A+ + + IG A + + L+ +++ S Sbjct: 109 IHKSKQIIFLGIGTSGILAKYASRCFVNIGRFAVYIDYPYFLVPDG--FYDKMVIIVFSV 166 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL--YTIAEEQATNSASISACH 246 TG ++ + +++IT + + + + + Y + + N ++++ Sbjct: 167 TGETEDIIKQLRQFRNFDCIIISITNSEMSTIAKLSDLVISYYLPLQIKGDNKVNLTSQI 226 Query: 247 AQGMLTDLLFIALIQ 261 + + L L Q Sbjct: 227 PVMNIIEKLTFNLSQ 241 >UniRef50_B6R4H6 Transcriptional regulator, RpiR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R4H6_9RHOB Length = 283 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 45/265 (16%), Positives = 98/265 (36%), Gaps = 6/265 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + RI + + + + A Y L PD ++ ++A+ AGV S++V+FAQ LG+ Sbjct: 18 SLKARISTLSESMPKRLLQCARYALANPDRIALGTTAEIASAAGVQPSTLVRFAQTLGFD 77 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRG-DDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF ++ L + + + + + ++ + ++ L Sbjct: 78 GFSQMQQIFQGQLVGRSSEYTERLTKIRESGTNTPGSILGNFVERSKQSLDDLLRQVDTV 137 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA-SSP 179 L + L +A I L G+ + V + L K+G + +L + Sbjct: 138 ALERTIEALSAAENIHLLGLRRAYPVVSYLHYTLGKMGVRTNLLEYTGGILEERVQFINE 197 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +D L +++ E+ A + G V+++T + + + +S L E Sbjct: 198 NDALFVATFSPYSPEVVEFASKAFGRGVAVVSLTDSVLSPIARVSSTVLEVNEAEH---- 253 Query: 240 ASISACHAQGMLTDLLFIALIQQDL 264 + + L + +A+ Sbjct: 254 GAFRSLSTTMCLATSIAVAVGDARK 278 >UniRef50_A9BRR5 Transcriptional regulator, RpiR family n=2 Tax=cellular organisms RepID=A9BRR5_DELAS Length = 299 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 105/279 (37%), Gaps = 11/279 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +R+ ++ L++ K + ++ +Q D Q A + GV S+VV+FA+ G+ G Sbjct: 25 FLTVLREGFEALSRQLKAIGRHVEMQGDRLAFDGIQATAEQCGVQPSAVVRFAKHFGFSG 84 Query: 63 FPALKLALSEALASQPESPSVPIHNQI------RGDDPLRLVGEKLIKENTAAMYATLNV 116 + L+ A Q + + ++I+ + ++ A Sbjct: 85 YSELQALFRADAARQLSAQHDYQDRIRGLIASGNEPRSSARLAHEVIEGSIESLQALQRG 144 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQ 175 E+ V ++ A + L + V A+ L + + ++ Sbjct: 145 LPPEQFEAAVDLMLDAPSLWLAASRRAFPVGAYLAYALQHTEKPVHWLHGLGAMQKGELR 204 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 A +P D++LA+S+ E D L G ++LA+T + L RA+ L Q Sbjct: 205 ALAPGDVMLAVSFEPYAPETLEVVDAALARGARLLALTDSQLSPLASRATVTLLA----Q 260 Query: 236 ATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 + + + L LF+AL + ++ S Sbjct: 261 DAATFGFRSLTSTLTLAQSLFLALAYRMELAYEPSVKRS 299 >UniRef50_A6WWJ9 Transcriptional regulator, RpiR family n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6WWJ9_OCHA4 Length = 297 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 42/284 (14%), Positives = 92/284 (32%), Gaps = 11/284 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN I L + +K+AD++L P + ++LA S +++ +F + LG Sbjct: 1 MNLSTLIGSCRGSLTSNQQKIADFVLANPFAVATMGIEELAQATSTSSATITRFVRALGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F + + S P + E + ++ ++ Sbjct: 61 GSFTDFRGLAVQGYQSLLRPVENVDR---ARHIPPGKIAEDSFQSAAESLRQVMSEAGNT 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQ---AS 177 + A R+ G G S + Q A K + + + L Q Sbjct: 118 AWEGVAAQMMHAPRVAFLGFGVSANMLQYLADKSILSTQSQIMLNGAGGLERVAQKVLRL 177 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 P DL++A++ + G +A+T + L + ++ A Sbjct: 178 GPGDLVIAMALPRYSQATVDFLKLARGRGAYCIAVTDGPASPLCPHSHEQIFVPASHPVL 237 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + S+ + + A++ + + + + +L+ L Sbjct: 238 H----SSTIGALAAFEAII-AVLTAHHQSVSDAVSVTRSLMPYL 276 >UniRef50_B9QTZ2 SIS domain protein n=2 Tax=Labrenzia RepID=B9QTZ2_9RHOB Length = 287 Score = 144 bits (364), Expect = 3e-33, Method: Composition-based stats. Identities = 58/283 (20%), Positives = 104/283 (36%), Gaps = 10/283 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 I Y L+++ + ADYL S + +A +GVS +S + A+ +G+ Sbjct: 8 IRAAITANYADLSETLRTAADYLADNQLEIATRSLRAIAAASGVSPASYTRLARAIGFSD 67 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + AL+ L+ + S D + + + A ++ +L Sbjct: 68 YEALREQARMELSQRGSSFQDKARQLRNEADQP--LLPRQAAACVDNIKALVDDIDPVRL 125 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF-NAAAVRDMHALLATVQASSPDD 181 + V L ARR ++ G AS A FA+ A R+ +L + + + DD Sbjct: 126 EQVVDCLSKARRTVVVGALASAGFADYFAYLANWFNDSWIVAGRNGASLGGALASLTKDD 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++ +S AA+ G KV+ +T Q A H E Sbjct: 186 CIVIVSKHPYAHRSVRAAELAAENGAKVIVLTDSHAFPGLQFADHHFIQRTESPHF---- 241 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIR---HSEALVKKL 281 S+ A +L + + L+ + A RI+ L+ +L Sbjct: 242 FSSYAATLVLIETITGMLVARAGSEAEARIQNVDRHNRLLDEL 284 >UniRef50_B9R3N6 SIS domain protein n=3 Tax=Alphaproteobacteria RepID=B9R3N6_9RHOB Length = 302 Score = 144 bits (364), Expect = 3e-33, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 97/274 (35%), Gaps = 7/274 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L + + L +K A Y+L P+ S +++A+ AGV ++ V+ A+ +G++G Sbjct: 14 VLDDLAAELEVLTPELRKAASYVLENPNDVGVSSIREIADAAGVKPNTFVRMARSVGFEG 73 Query: 63 FPALKLALSEALASQPESPSVPIH--NQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + + EA+ S+ + L + ++ + + T Sbjct: 74 YEDFRQPFREAIRSRGTDFPDRARWLQSLSKGGQLGELFAEMAACAISNIENTFAATDAN 133 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSP 179 + + +AR + G+G + A+NF + + + + Sbjct: 134 AMKAAADAIVNARHTYVLGVGVNNSNARNFTYLADMAVDTIWTIPRMGSVATDDLARADK 193 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+LLA++ R ++ A + G ++AI+ + + + H AE Sbjct: 194 RDVLLAMTCKPYRTDVIEAVEVAREQGLTIVAISDSPASPIVVGSDHAFIIDAETPQF-- 251 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRH 273 + + L + L +I I Sbjct: 252 --FPSSVSTIALLETLLAFVIADAPPDVVANIEK 283 >UniRef50_D2NRV5 Transcriptional regulator n=2 Tax=Rothia mucilaginosa RepID=D2NRV5_9MICC Length = 272 Score = 144 bits (363), Expect = 3e-33, Method: Composition-based stats. Identities = 39/276 (14%), Positives = 98/276 (35%), Gaps = 21/276 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + +++++++ ++L + + LA++ S SS+++ +KL + Sbjct: 1 MDLQDVVNANQHRFSETEREILAFMLENEEFVAESTINSLAHKTYTSTSSIIRLTKKLNF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK + +L + I+ + T + Sbjct: 61 SGFAELKYFIKSSLNRSEPFNP------------------RFIESGREDIQRTYDYLEHM 102 Query: 121 KLHECVTMLRSARRIILTGIGASGLVA-QNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 +L + + AR + G G + A Q F + G + + + + + Sbjct: 103 ELSGLLKRIHEARTVYCFGTGYAQRNAVQEFTKSMQVCGKFCQVIPARNEFESAMNNMTQ 162 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD+++ +S++G + + ++A+T N + A + L+ ++ Sbjct: 163 DDVVIIVSFSGQTENMREHIKMLALRRIPMIAVTAIGVNYMSSHAEYSLHYQTTPTQIST 222 Query: 240 --ASISACHAQGMLTDLLFIALIQQDLELAPERIRH 273 + A +L D + I+ E ++ Sbjct: 223 QRKPYYSFVALSVLLDYIVRRYIEHVENERRESLQD 258 >UniRef50_C5SGA6 Transcriptional regulator, RpiR family n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SGA6_9CAUL Length = 292 Score = 144 bits (363), Expect = 3e-33, Method: Composition-based stats. Identities = 53/271 (19%), Positives = 105/271 (38%), Gaps = 11/271 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 I ++Y ++ K++A ++L +P+ + +A A V S++V+FA+ LGY G Sbjct: 25 LRTAIMRQYDDASRRMKQVASFVLDKPEDVAFETLAVVAERADVQPSTLVRFAKTLGYAG 84 Query: 63 FPALKLALSEALASQP------ESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNV 116 ++ + + L S E ++ G++ L + ++ + + A+ Sbjct: 85 ASQMQKVIRDELLSSHISLAYGERARAFGASEAIGEEGLSTILDEFAEADILALNHLRQS 144 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA 176 S +++ V + +A + + G + VA A+ L + G + L Sbjct: 145 VSADQIRTSVEAIIAAENVYIAGFRRAFPVASYLAYALQRAGKRVVFLDGAGGLWEQQAR 204 Query: 177 -SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 +DLL+AIS+ E L G +VL+IT + L + L E Sbjct: 205 GIRAEDLLIAISFRPYAEETVRCHALALERGAQVLSITDSNVSPLVKPGHQSLLLRESEV 264 Query: 236 ATNSASISACHAQGMLTDLLFIALIQQDLEL 266 + + A L L +A + Sbjct: 265 R----AFRSLTAPLCLAQSLVVAYAFANAPE 291 >UniRef50_Q5WD27 Transcriptional regulator n=8 Tax=Bacilli RepID=Q5WD27_BACSK Length = 266 Score = 144 bits (363), Expect = 3e-33, Method: Composition-based stats. Identities = 49/263 (18%), Positives = 107/263 (40%), Gaps = 17/263 (6%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 ++ L+ +++ L Y+ D +S L+ A VS ++VV+ +K+G+KG+ + K L Sbjct: 13 FERLSDTERYLLTYIHDHLDEIATMSIVTLSERAAVSTATVVRLMKKIGFKGYTSFKYKL 72 Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKL---IKENTAAMYATLNVNSEEKLHECVT 127 + I + L +G ++ +++N + T+ + S ++ + V Sbjct: 73 EQD------------KQMIDKEGSLSDIGNEIKQALQKNEEEVRRTIQLQSIGQIEDAVQ 120 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD-DLLLAI 186 + A +I + G S ++A+ A KL + D + + Q D DL + + Sbjct: 121 KMHDANKIYIFARGFSQMIAKEMAVKLQVLDKTCEMHDDPNIIRIKSQKMHHDTDLAIFV 180 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY-TIAEEQATNSASISAC 245 S G +EL A + + +T + L + + L +E + + Sbjct: 181 SLNGETKELVEACQNLSIRQVTTITLTTKVNSTLNKLSDMTLIGYKSEHSLIPDYEVRSR 240 Query: 246 HAQGMLTDLLFIALIQQDLELAP 268 + ++ +L A + + E Sbjct: 241 LSLNVIARVLLDAYVIRTKESVK 263 >UniRef50_C5F607 Predicted protein n=1 Tax=Lactobacillus paracasei subsp. paracasei 8700:2 RepID=C5F607_LACPA Length = 269 Score = 144 bits (363), Expect = 4e-33, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 102/279 (36%), Gaps = 19/279 (6%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I ++ +AD+ ++ +L+ VS+SS+ +F +K+G Sbjct: 10 DIFILIESCRLNFTSVEQVIADH---HLSKRPAMTIDKLSEHLAVSKSSITRFCKKIGLD 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + L +L ++ + S K+ + + + S+ Sbjct: 67 NYKELIFLYKLSLNNETANLSASS---------------KITAAYHSLATRSDSNYSQAV 111 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + +L + + G G + +F +K ++G + D +++L + ++ D+ Sbjct: 112 IDAFCELLHQHKIVHFFGKGFNSYAGSDFQFKFSRVGKYIRVITDENSILMSANFANKDE 171 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++ S G EL A + +L IT + L A L + + + Sbjct: 172 LIVVASLRGDDEELLEAMKIAKKRRVPILLITSNRYSQLIPHADVTLLAASLTKEEALGN 231 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 IS + D+++ I A R SE ++ K Sbjct: 232 ISPQIPILIQLDIVYERYI-HLYADAIARWLTSEQILHK 269 >UniRef50_A3V1X8 Transcriptional regulator, RpiR family n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V1X8_9RHOB Length = 289 Score = 143 bits (362), Expect = 5e-33, Method: Composition-based stats. Identities = 45/282 (15%), Positives = 103/282 (36%), Gaps = 7/282 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 ++R + +++++LA ++L + + +A +AGVS +VV+F +K+G+ G Sbjct: 7 LEDQLRAAMPTMTRAERQLASHMLGNFPLSVLGTVATIAQDAGVSAPTVVRFVRKIGFSG 66 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 +P + L E + + SP + + + + TL+ Sbjct: 67 YPEFRAQLHEEMGERLASPITKHEKWADRLE-IDHPLNRFALRVIENLRQTLSQQDLRTF 125 Query: 123 HECVTMLR-SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASSPD 180 +L +R + L G + +A+ F L + + + + + S Sbjct: 126 DAVRDLLADKSRSVYLIGGRLTRSIAEYFTTALHVMRSDVTLLSSQPNTWPPALLDMSAG 185 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L+ + A+ +V+ T + A H L + E + Sbjct: 186 DVLVVFDIRRYEPSVQQFAELAHAQQMEVVLFTDQWVSPTAGVARHILTSQIEVPS---- 241 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 + L + + AL + + ER+ E ++++ Sbjct: 242 AWDTIVPLIALVESMLSALQDANWQDTRERLERMERFYEEML 283 >UniRef50_A6P0T4 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P0T4_9BACE Length = 274 Score = 143 bits (362), Expect = 5e-33, Method: Composition-based stats. Identities = 59/266 (22%), Positives = 107/266 (40%), Gaps = 11/266 (4%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L ++++K+ DY+ D S QLA G+S ++V +FA+ +G F LK + E Sbjct: 11 ELTRAEQKILDYINTNTDAFLFSSIGQLAQRLGLSDATVSRFARHVGCADFKDLKSMVVE 70 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 A + + ++ + T E + + V L SA Sbjct: 71 QAAGPAAKVTETLSRDGAFS------PAAWLERQQMYLQKTARQLDEAEFNRGVETLASA 124 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSPDDLLLAISYTGV 191 RRI L G AS +A+ A++L ++G + + LL + + DL++ S++ + Sbjct: 125 RRIFLHGKNASSSLARMLAFRLGRLGLQVSLLPSGGSELLEGLLQAGKQDLVVMFSFSKL 184 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGML 251 RE + D G + LA T ++RA L+ E+ + A L Sbjct: 185 SREGRVILDYSRTAGYQTLAFVSRTCIPPEERADISLFAYRGEEKE----YHSMAAPTAL 240 Query: 252 TDLLFIALIQQDLELAPERIRHSEAL 277 DL+ +A+ + + + L Sbjct: 241 LDLMVLAVTSRLGARGTDSLERLHQL 266 >UniRef50_A7FLM3 Transcriptional regulator, RpiR family n=47 Tax=Enterobacteriaceae RepID=A7FLM3_YERP3 Length = 314 Score = 143 bits (362), Expect = 5e-33, Method: Composition-based stats. Identities = 56/283 (19%), Positives = 112/283 (39%), Gaps = 12/283 (4%) Query: 1 MN-GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M R+R Y L ++++AD++ D +S +LA +GVS+++V + ++LG Sbjct: 38 MKQIDERLRGHYTQLTPQEQRVADFIFAHFDDLISYNSAELARLSGVSKATVSRLFKRLG 97 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 Y + ++ + S Q + + K+ A + +N Sbjct: 98 YGSYREMREEVRALRQSGMPLTDNRDAVQGN------TLLARHYKQEMANLAHWVNQLDS 151 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQASS 178 ++L + + + A RI+L G+ S VA + +L+++ + L + + Sbjct: 152 QQLTDVIDAMAQAPRILLLGLRNSYPVALHLRQQLLQVRQQVHVIPQAGQTLAEELVDIT 211 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P DL++ +++ + + M G L I +L A L T + Sbjct: 212 PHDLVIVVAFRRRPKAIREILLHMQGQGVPTLLICEPQAQSLLSLARWRLTTP----LDS 267 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++ + A L +LL AL+ + L +RI L L Sbjct: 268 VSAFDSYSAAMSLVNLLSNALLHKILAEGRQRIHQIANLYDSL 310 >UniRef50_C3RQD3 Predicted protein n=1 Tax=Mollicutes bacterium D7 RepID=C3RQD3_9MOLU Length = 261 Score = 143 bits (362), Expect = 5e-33, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 90/270 (33%), Gaps = 13/270 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M +I Y L ++KK+ +L P+ S N S+S++++FA+KLGY Sbjct: 1 MKFKEKISIYYTSLTPTEKKICTKILDNPEIIIKNSIIDAGNRCDTSKSAMLRFAKKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ K A+SE S+ D +++ ++Y +++ E Sbjct: 61 SGYSEFKYAISEDYDSKQND---------ETIDVNESFLKRISSLFAESVYNLGDLDYEL 111 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L + M+ + GIG + A + L V D + + Sbjct: 112 QLQQLAKMIDEYSYVKSIGIGNTAFCANQLVYSLYSYNKFIECVGDCIQFDYLKNCLNSE 171 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 LL+ S T + G K++ IT + L + ++ + Sbjct: 172 YLLIIFSVTCSETKYLDLVKTAKNKGAKIVVITMNNEHKLISLSDLSFILPSQTSPLQNK 231 Query: 241 S----ISACHAQGMLTDLLFIALIQQDLEL 266 + +++ + Sbjct: 232 KVLKQLDNRTMMYFFAEIISYYYGLHLEKK 261 >UniRef50_A6M2I1 Transcriptional regulator, RpiR family n=3 Tax=Clostridiales RepID=A6M2I1_CLOB8 Length = 263 Score = 143 bits (361), Expect = 5e-33, Method: Composition-based stats. Identities = 48/276 (17%), Positives = 111/276 (40%), Gaps = 22/276 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I + ++ L ++D + +Y+ L+ QLA++ VS++++++F+QKL Sbjct: 1 MKLDELINKYHKHLNENDLYIWNYISKHRKECETLAIDQLAHKCNVSRTTILRFSQKLSL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG+ LK+ L E+ + ++ A + E+ Sbjct: 61 KGYGELKVYLKLDNEKSKENVNN-------------------VEAVCDAYNEVIKNIKEK 101 Query: 121 KLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + ++ +R + + GIG + + F + G + A V ++ Sbjct: 102 DCTDIFELIDKSRTLYVYGIGMVQSSIKKEFKRTFLTAGKIFYDLSGYTEANAIVDLATD 161 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA--EEQAT 237 +D+ + IS +G + + A + +++IT N+L + + + LYT Sbjct: 162 EDVFVIISVSGENQFIMDFAKNLKIKNIPIISITKLKDNSLAKLSDYNLYTSTALIPSIY 221 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRH 273 N + + +L ++LF+ ++ + + +H Sbjct: 222 NDIDFESLTSYFILIEILFLKYMEYKTQKNKKEEKH 257 >UniRef50_UPI0001C316A3 transcriptional regulator, RpiR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C316A3 Length = 280 Score = 143 bits (361), Expect = 6e-33, Method: Composition-based stats. Identities = 74/257 (28%), Positives = 110/257 (42%), Gaps = 7/257 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +R R L SD+K+A+ +L QP S ++LA+ AG ++SSVV+F Q G +G Sbjct: 7 LLPHLRTRLPLLGGSDRKIAEVVLRQPQDVVFWSVRELADAAGTAKSSVVRFCQGSGLRG 66 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LKL L++ A ES + DP V +++ + Sbjct: 67 FHDLKLILAQETALARESDPL-------AHDPAGDVLGAVVRAGAETLRDAAATVQRSAF 119 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 +L A +++ G G SG +AQ+ A +L IG AAA D S D Sbjct: 120 DATAGLLARADAVLVVGGGGSGPLAQDAAQRLRVIGVRAAAPADAPGQHVAAALLSRGDA 179 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 LAIS+ G A G AIT F + L A H L A + A++ Sbjct: 180 CLAISHRGATAGTLEAVAAAADAGAATAAITSFAGSPLTGLADHVLVAGARAASPRLAAL 239 Query: 243 SACHAQGMLTDLLFIAL 259 ++ A + D L +A+ Sbjct: 240 TSRLAHVAVLDALLVAV 256 >UniRef50_UPI0001BC4077 transcriptional regulator n=1 Tax=Fusobacterium sp. 3_1_5R RepID=UPI0001BC4077 Length = 275 Score = 143 bits (361), Expect = 7e-33, Method: Composition-based stats. Identities = 40/279 (14%), Positives = 108/279 (38%), Gaps = 9/279 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +I++ L +++K++A + L + ++S+++A +S +S+++F + +G+ Sbjct: 4 LYEKIKEA--KLTKTEKRIAQFFLESEEDIFFMTSKEIAELLQISDTSIIRFVKHIGFTN 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F + + L ++ S I N + L+ + + + S K+ Sbjct: 62 FTDFRDFIKNNLQTKMASLPQFIQNMEELKHNSVE--QALLSQMNKNISTLFDTKSLAKM 119 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLM-KIGFNAAAVRDMHALLATVQASSPDD 181 E + +L A + G+ ++ +A +L +G V + L +++ +D Sbjct: 120 EEIIDVLWEAENRYIVGLKSTVGLANFLGIRLSFMLGKVYTFVSNDTILFNSIRNIKKED 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L Y RE+ L + G K++ ++ + A + + Sbjct: 180 VLFLFDYPTYSREMILLCRVAKKRGAKIILVSDMINSPCSMYADIHFTIKIKGISL---- 235 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + + L A+ ++ + + + L+ + Sbjct: 236 FHSLISSQFFVEYLLSAISKKMTKDQKKEFLVWKKLLSE 274 >UniRef50_B2SAV7 SIS domain protein n=40 Tax=Alphaproteobacteria RepID=B2SAV7_BRUA1 Length = 286 Score = 143 bits (361), Expect = 7e-33, Method: Composition-based stats. Identities = 54/258 (20%), Positives = 98/258 (37%), Gaps = 6/258 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R+ + L + K+ ADY+ D + ++A AGV S+ ++F Q LG+ G Sbjct: 27 FEARLLEVADRLPKRLKQCADYVAANQDRIAVSTVAEMAEGAGVQSSAFMRFCQILGFSG 86 Query: 63 FPALKLALSEALASQPESPSVP-IHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F ++ E A S +H + + + + ++ L E Sbjct: 87 FSEMQRLFRETYAGGWPDYSTRLLHLRETAAGRAPALLAEFAEAGRTSLEGLLKTIEPEA 146 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + V +L SA I + GI + VA A+ L K+ A + L D Sbjct: 147 LEKAVELLASANTIHIIGIRRAFPVASYLAYALEKMAVPAMLHSAVGKLENLHA-IHKGD 205 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +LLAI+++ E + + G V+ IT + + + A L + + Sbjct: 206 VLLAITFSPYSPETIGMTEAVAARGIDVIGITDTIVSPMSKVARQTLLVS----EVDFGA 261 Query: 242 ISACHAQGMLTDLLFIAL 259 + A L + +A+ Sbjct: 262 FRSLSATLCLAIAIAVAV 279 >UniRef50_B0N0Q7 Putative uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N0Q7_9FIRM Length = 296 Score = 143 bits (360), Expect = 7e-33, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 118/283 (41%), Gaps = 5/283 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + +I + + + D++L + + + ++A + S+++VV+FA+ LG+ Sbjct: 1 MFLIQKIEELMVNHPDARYAVGDFVLHEQKNLHNYTINEVAEHSYTSKATVVRFAKTLGF 60 Query: 61 KGFPAL-KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 +G+ K+ +SE + V + D + + + K ++ T ++ Sbjct: 61 EGWREFMKVFISEMKYLEQHQGDVDANYPFTEDSSVDEIINNIKKVQIESIQDTADLIET 120 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L + L A+ I++ G+ + + + F K++ IG + + + + + Sbjct: 121 DMLEMATSYLLKAKHIVIFGLSPNIFLGELFRRKMITIGK-SIDIAKLGEMGIISRTLGS 179 Query: 180 DDLLLAISYTGVRR--ELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 DD + ISY+G E +L V+ IT N L+++ S L ++E+ Sbjct: 180 DDCAIMISYSGNNEKGEPMRYLPVLLDNQVPVIGITSGGDNYLRKKLSCVLTISSKERLY 239 Query: 238 -NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ + + + + LF +D + H +++ Sbjct: 240 TKISNFATEESIHFILNCLFSCYFARDFQNNNHFKLHHSKVLE 282 >UniRef50_UPI000196BB09 hypothetical protein CATMIT_01392 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196BB09 Length = 279 Score = 143 bits (360), Expect = 8e-33, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 109/267 (40%), Gaps = 6/267 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L + ++ + L ++D + Y++ + SS QLA E S +++++ +K+G+K Sbjct: 5 ILEQFKKDF-KLNENDLFIIQYIIEHSEEITSYSSHQLAKETYSSPTAIIRLVKKIGFKN 63 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + KL + L + +I ++ L + KL K T + T + Sbjct: 64 YNDFKLNIHSLLNK-----YTLSNMRIMSNEDLYTIKNKLAKIETGIINQTKENLNSNVF 118 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 +E +T++ + I + A+ +++ + L + + + L + D Sbjct: 119 NEVMTIISRNKYIDIIANDANAAISEYGSHILSSVNKFVNVYHNGNRQLWFSLNVTSDHT 178 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ IS G R L AD + + + IT N L + + LY I + N + Sbjct: 179 VILISKFGKTRHLLNIADTLKQRHIPFIVITTDDTNDLAHKTPYVLYGINHGELDNLKDM 238 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPE 269 + + DL++ AL D + A E Sbjct: 239 IFYISLKYIFDLIYTALFSYDYKQAKE 265 >UniRef50_Q723C8 Phosphosugar-binding transcriptional regulator, RpiR family n=18 Tax=Listeria RepID=Q723C8_LISMF Length = 250 Score = 143 bits (360), Expect = 8e-33, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 94/249 (37%), Gaps = 18/249 (7%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L ++ + +Y++ D ++ + LA EA VS +++++F +K G GF ++ L Sbjct: 9 ELNDTELDIYNYIVANLDKVVYMRIRDLATEAHVSTTTILRFCRKFGCNGFSEFRVKLQL 68 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 L Q + + T + ++ V +LR Sbjct: 69 YLEEQKLAQIDMADET----------------TYIDFLKRTAQPEFKAQIQNAVEILRDR 112 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM--HALLATVQASSPDDLLLAISYTG 190 ++ G+G+SG++A+ A + A + D H S ++AIS G Sbjct: 113 ELVLFAGVGSSGVIAEYGAIYFSSLFTLALHIEDPLNHPFYHLSSKLSDKICMIAISVEG 172 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGM 250 ++ ++ KV++IT + + + + + ++ A+I++ Sbjct: 173 ENEDIIRYIHQLKAQNCKVISITNSAKSTIARLSDANIAYYINKEMYQEANITSQLPALY 232 Query: 251 LTDLLFIAL 259 + + + Sbjct: 233 TIENIAREI 241 >UniRef50_A6M092 Transcriptional regulator, RpiR family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M092_CLOB8 Length = 236 Score = 143 bits (360), Expect = 9e-33, Method: Composition-based stats. Identities = 38/252 (15%), Positives = 98/252 (38%), Gaps = 21/252 (8%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 Q +++ K+ +++ + +++ ++LA+ VS S++++F KL G+ K Sbjct: 5 DNIQRFNETEIKIYKFIIDNEEKIHYMTIRELASAIQVSTSTIIRFCNKLDCDGYKKFKE 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L + + E I L + K N + E+K+ + + Sbjct: 65 RLEKYVHRMQE---------IPPQSDLTEMLNYFKKTNINSF--------EQKIEQGGEV 107 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 +R + ++ G G+SG +A+ A +G + + D + +++A+S Sbjct: 108 IRKSETVLFLGSGSSGALAKYGARYFSNLGKFSMGLEDTFYPITKD---MKTTVVIALSV 164 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA-SISACHA 247 +G + + ++ +L+IT + + + + + + + N + + Sbjct: 165 SGETKGVIDLINQFKVSKCIILSITNQSNSTIAKMSDWNISYNMDMHQANGGYNATTQVP 224 Query: 248 QGMLTDLLFIAL 259 L + L + Sbjct: 225 VLFLIEALARRI 236 >UniRef50_Q11C05 Transcriptional regulator, RpiR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11C05_MESSB Length = 307 Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats. Identities = 51/280 (18%), Positives = 104/280 (37%), Gaps = 13/280 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + IR R + Q + +AD+++ + S +LA ++ S++V+FA+ LG+ G Sbjct: 25 LINLIRLRRMSMPQKLRAVADFIIERAHEVPIHSITELARMLDIAPSAIVRFAKLLGFSG 84 Query: 63 FPALKLALSEALASQPESP----SVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 F ++ L + S S + V + N +A+ A Sbjct: 85 FSEMQRLLRSQAITGQNSYVGLTSKLTRPGAGQVSTIGHVLDAFFDANISALQACRAEVD 144 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATV-QAS 177 +++ + V + SA I + G + +A + L +G LL Sbjct: 145 VQEMEKIVEAMASANLIAVIGQKRAFPLASYLFYGLSMLGCKTVLFDGPGGLLQRQAAIL 204 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE-QA 236 +D+L+ IS+ ++ A +V+AIT + L A+ L+ Sbjct: 205 DKNDVLITISFAKYAEDVIATARAAKEANVEVIAITDSKESPLADIATRALFVQDSNLNG 264 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 S S+++ + LF+ L + + + + Sbjct: 265 IRSISVTST-----ILQSLFVGLGIRI--ENKQALNKNRE 297 >UniRef50_A6BJ02 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A6BJ02_9FIRM Length = 300 Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats. Identities = 49/276 (17%), Positives = 107/276 (38%), Gaps = 12/276 (4%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L ++ K +A+Y+L A ++S ++A + GVS+SSV++F++ +G+ GF + AL + Sbjct: 27 HLTKTQKIIAEYVLDNASEACFMTSTEIALKLGVSESSVIRFSRTIGFDGFMDFQKALRK 86 Query: 73 ALASQPESPSVPIHNQIRGD------DPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 + S S I + D + K + NS E + Sbjct: 87 DYQDKVLSISSSITVPSQRIAKQAKLDTSSDYINRHFKNAAHNLEEIFIQNSIETFEQAA 146 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNA-AAVRDMHALLATVQASSPDDLLLA 185 ++ S++ + + +A F L ++ + + + + S D L+ Sbjct: 147 DLIVSSKHKYIAATRGNICLADFFLLYLKQMVPHVTMTTTTSMSPIDHMCNISHTDCLVL 206 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 S+ + + A+ G ++ IT + L + A L + ++ Sbjct: 207 FSFPRYSSQDEVTAEMAHDAGASIIVITDKPSSLLAKYADILLTVPVDSNTF----FNSM 262 Query: 246 HAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +T+ L + +I + +R+ + + KL Sbjct: 263 IGPQFVTEAL-LEIISHRAKGIEKRLNIIDKYLNKL 297 >UniRef50_B3WB04 RpiR-like protein n=8 Tax=Lactobacillus RepID=B3WB04_LACCB Length = 250 Score = 142 bits (358), Expect = 1e-32, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 95/254 (37%), Gaps = 10/254 (3%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 L+ ++ L DY+ + S QL+ A VS ++VV+ +K G+ G+ + L Sbjct: 1 MATLSPTEAYLWDYIENHQQAVVNASITQLSTAANVSPATVVRTMKKKGFNGYTDFRHDL 60 Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 + D + +K+I +N +Y TL + + V +L Sbjct: 61 LKRTGDAAP---------FSILDQVDDQIKKVIMQNQVEVYNTLENLKVSVIEDSVQLLA 111 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 A +++ G S +A KL +G A D + + SP + + I+ G Sbjct: 112 KAEIVLILARGLSESIASEVTLKLQLLGKYAEFFSDPNIIQTIAGQVSPKAVAITITLNG 171 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY-TIAEEQATNSASISACHAQG 249 EL AA + + +T + Q A ++ + +++ Sbjct: 172 ETPELVAAAKTLAARDIPQIILTTNAEAPIVQYADELFVGYKSKAAYFDKYEVASRLPLQ 231 Query: 250 MLTDLLFIALIQQD 263 +++ +L + + + Sbjct: 232 VMSRILLDSYVVRK 245 >UniRef50_C2EL56 RpiR family transcriptional regulator n=4 Tax=Lactobacillus RepID=C2EL56_9LACO Length = 251 Score = 142 bits (358), Expect = 1e-32, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 101/265 (38%), Gaps = 25/265 (9%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 L+ + + +++ P+ ++ + +AN+ V+ SSV++F KLG+ FP K L Sbjct: 9 LSSLSDVELTVYRFVVNNPEKVVYMRVRDIANQTHVANSSVMRFIHKLGFGSFPEFKAYL 68 Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 + I + ++ L + K+ +L Sbjct: 69 KN---INQTVATRHIFTFVNQNNFLPDIENKI--------------------RLVADLLY 105 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 + I L GIG S A A L +GFNA + D L ++ ++ +L S +G Sbjct: 106 QSDNIPLLGIGNSASTAMYAARILALLGFNAFPITDPFYPLNKQLENTSNNTILCFSVSG 165 Query: 191 VRRELNLAADEMLRV-GGKVLAITGFTPNALQQRASHCLYTIA-EEQATNSASISACHAQ 248 EL + + +V+AIT + + + + L +++ +S+ Sbjct: 166 ETEELIEQLNYCTKRPDNQVVAITSNPTSTIANISKYVLAYKEQKQRLFKYCDLSSQIPA 225 Query: 249 GMLTDLLFIALIQQDLELAPERIRH 273 + + L LI ++ +L E Sbjct: 226 MYIVEALAQVLISKNQDLTNENKAQ 250 >UniRef50_Q09KH2 FitR n=27 Tax=Proteobacteria RepID=Q09KH2_ECOLX Length = 295 Score = 142 bits (358), Expect = 1e-32, Method: Composition-based stats. Identities = 50/273 (18%), Positives = 102/273 (37%), Gaps = 4/273 (1%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 R R R L + +A Y+ + ++ ++A S ++V++ Q LG+ G Sbjct: 14 ERFRTRASQLTPGLRVVASYINEHREVVLEQTAMEIAATLNTSDATVIRAIQALGFAGLR 73 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 LK L + L S + + +++ + + L + Sbjct: 74 DLKRTLEQWLGPALSSSEKMSTTVSNLTSDVNTAIDFVLEGHLYTCNVLSEPENRHALAQ 133 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSPDDLL 183 V +L AR++ + GIGASG++A A +IG A A+ L + A D+L Sbjct: 134 AVALLVQARQVAIFGIGASGILADYTARLFNRIGLPATALNRTGIGLAEQLIALQRGDVL 193 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + ++ RE E R+G V+ +T + + AS ++ + Sbjct: 194 IMMAQKSAHREGLTTLREARRLGIPVILLTNALDSRFSKDASIVIHVP-RGDEKGKTPLH 252 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + +++ ++ + A + I+ Sbjct: 253 GTV--LLCLEMIVWSVASAVPQRAVKTIKRIND 283 >UniRef50_D2BNU3 Transcriptional regulator, RpiR family n=4 Tax=Lactococcus lactis RepID=D2BNU3_LACLK Length = 248 Score = 142 bits (358), Expect = 1e-32, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 97/251 (38%), Gaps = 21/251 (8%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 ++ L + + + D+++ P+ + ++ + LA++A VS S++V+ KLG++G+ LK Sbjct: 6 EQISKLNELETLVFDFIIKSPEEVQQMTIRDLASQAHVSTSTIVRLCTKLGFEGWSDLKF 65 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L L + + ++ +N A KL+ M Sbjct: 66 YLKNQLKEKTPEEQHYDNMLEFNM-----FLRRMNTDNYQA-----------KLNNAAQM 109 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + A + G+G SG +++ + G + + D + + + + +S Sbjct: 110 IAKADYTVFLGLGTSGSLSEYATKYFVNTGLRSFVISDPFQAVQVQGMG--NVVAVIMSV 167 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL---YTIAEEQATNSASISAC 245 +G ++ E G K+++IT + + A + L + +++ Sbjct: 168 SGETEQVVNKELEFKAGGAKIISITNNEDCTVAKLADYQLSYNLVNEWSKQYPLGNLTTQ 227 Query: 246 HAQGMLTDLLF 256 + ++L Sbjct: 228 LPVLAILEILA 238 >UniRef50_C6DBI2 Transcriptional regulator, RpiR family n=9 Tax=Enterobacteriaceae RepID=C6DBI2_PECCP Length = 262 Score = 142 bits (357), Expect = 2e-32, Method: Composition-based stats. Identities = 47/246 (19%), Positives = 94/246 (38%), Gaps = 8/246 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L + Q Q L +++ ++ ++ ++ ++LA + VS +++++ QK+G+ Sbjct: 3 NRLASLMQHGQVLTRAEYRVLAFIAEHSSLIGKITVRELAQKTYVSTATIMRLCQKIGFS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ L P P+ L + + T S + Sbjct: 63 GYSEFIYHCKTLLTDNPRLSPSPVVTPDDA--SLPDAFQHFVDNYQR----TFAYISHQD 116 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 +LR L G G S L A+ A KL +G +A + + + + Sbjct: 117 RATFSAILRQESHFFLYGAGFSHLFAEYLAKKLQVLGKDAFSSGLGDSRGIFLNNAPKYQ 176 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + +AIS +G ++ A +G KV+A T + N+L + A + + + Sbjct: 177 VFIAISRSGETEQVLDKARIAKNIGMKVIAFTRASLNSLGELADLHFRLYDDAVHYAAEA 236 Query: 242 --ISAC 245 IS+ Sbjct: 237 GEISSF 242 >UniRef50_D2EIN0 Putative uncharacterized protein n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EIN0_PEDAC Length = 271 Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 96/280 (34%), Gaps = 18/280 (6%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N +L I + + D+ +A+Y + + LA + VS SS+ +F+ K+G Sbjct: 7 NLILMIESKREQFTDVDQIIANYFVAHQE---VRDINGLAKKLAVSPSSITRFSHKIGLS 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + L E L S S + ++ A T + E+ Sbjct: 64 NYKELVFLYKEYLGSLNRKVSR--------------ISSDVVDSYRAIAQRTSDRYDEQT 109 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + R I G+G + V +F ++ + G D ++ D Sbjct: 110 VQLFCERIFKNRIIFFWGLGFNSFVGLDFEFRFARFGKIVQHFSDQQSISLNANFLKKGD 169 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 LL S + + + + + G +L IT +A +YT + + + Sbjct: 170 TLLISSISAKDKSILKSIETAKARGAHILLITANHESAYLPYCDGVMYTASFSPEESLGN 229 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 IS + D+++ I + SE ++K Sbjct: 230 ISPQVPALIDLDIIYSKYIDLHQHD-LSQWAKSENILKNW 268 >UniRef50_C7HWU0 Putative uncharacterized protein n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HWU0_9FIRM Length = 285 Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 43/269 (15%), Positives = 108/269 (40%), Gaps = 11/269 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + Y+ L +++K +ADY++ P+ +S +++ANE VS ++VV+ Q G+ Sbjct: 9 KVIDIFKNNYKNLFKAEKIVADYIINNPNKVTLMSVKEIANETKVSDATVVRMCQHSGFD 68 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF +K+ L + ++ D E + + + ++ Sbjct: 69 GFYQMKILLLRDIGEGNQN---------DIADFQDKPIEFFLNRKKSLINTINKEDNINN 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V+ L + ++ G + VA + ++L ++G LL + +D Sbjct: 120 IKKLVSKLLDSNITLIAATGNTLPVALDLEFRLNRLGIKTFTTSTNERLLNYTSNLNEND 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI--AEEQATNS 239 L+ IS +G+ + + +D K IT ++L + + +++ + + Sbjct: 180 FLITISKSGLSKNILKVSDIANNKNIKQACITSEINSSLSENSDITIFSGKLYNDINDSY 239 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAP 268 + + + ++ D++ + Sbjct: 240 NGLESHIGEFIINDIIIAFVASTKHNKNQ 268 >UniRef50_B5H8Z9 Transcriptional regulator n=3 Tax=Streptomyces RepID=B5H8Z9_STRPR Length = 315 Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 60/273 (21%), Positives = 106/273 (38%), Gaps = 14/273 (5%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 L+ +++A Y++ A LS LA GVSQ SV +FA LGY G+PAL+ AL Sbjct: 46 HRLSPGQRRIAQYIIDHLTEAAFLSITDLAERVGVSQPSVTRFATSLGYSGYPALREAL- 104 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN-SEEKLHECVTMLR 130 + +A + S +IR ++ + + + V +++ L Sbjct: 105 QPIALSAVAGSPETRAEIRRNE-----LQAAVDAEIQNLENLRRVLADTDRVLGIGRELA 159 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD---DLLLAIS 187 + + + G+ S +A+ FA+ +I + V ++ S + +LA + Sbjct: 160 LSMPLTVLGLRISVSLAEYFAYAARRIHPDVRLVTRGGSVAYDALLQSREAGGTWVLAFA 219 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHA 247 E A R G +V IT T L + A L + + A Sbjct: 220 MPRHANETLAALRAARRTGLRVALITDLTLGPLVEEADVTLTAGTGSRLV----FDSYAA 275 Query: 248 QGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 G+L+ + A+ D E R+ E + + Sbjct: 276 PGVLSAAVLQAMADADPERTQVRLEGYEQVADQ 308 >UniRef50_UPI000196AB43 hypothetical protein CATMIT_01461 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196AB43 Length = 295 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 101/243 (41%), Gaps = 3/243 (1%) Query: 6 RIRQRYQG--LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 IR+ + + ++K+L YL+ Q + + + +A E ++ SSVV+F QKLG++GF Sbjct: 2 LIRESLEKCPMNPNEKRLGQYLISQGIQLENATVRTVAKEVFLAPSSVVRFVQKLGFEGF 61 Query: 64 PALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 K E + + + +D ++ K+ + T+++ + + L Sbjct: 62 NDFKKQYLEEIRYLSTHFQEIDSNRPFSQNDKNIVIANKIGLLYDETLQDTISLLNHDTL 121 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 E + + I + GA +A F K+MKIG S + L Sbjct: 122 QEAINRIEKKEHIAIVVSGAQKGIAYTFKEKMMKIGKKVDIFDSTDEAFYEACYCSSNTL 181 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + ISY+G + +++ + IT + N+L ++ CLY E+ ++ Sbjct: 182 FILISYSGETSKCLFICHKLVERKLSFITITTYGTNSLSSQSDCCLYVSTREKLIDNLGT 241 Query: 243 SAC 245 + Sbjct: 242 FSF 244 >UniRef50_A8S164 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S164_9CLOT Length = 257 Score = 141 bits (355), Expect = 3e-32, Method: Composition-based stats. Identities = 48/270 (17%), Positives = 99/270 (36%), Gaps = 21/270 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN RI + Y L +D+++ + +L + ++S +LA VS++++++ +KLG Sbjct: 1 MNLEYRINESYDRLTANDREVLNRILRNKAQSAGMNSTELAAFCHVSRTTLIRLFKKLGI 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF +L L E ++ + ++E + + + E Sbjct: 61 GGFAEFRLLLKERA-------------------GMQELARLDMEEIISNYHRMVEGLREY 101 Query: 121 KLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + + A I L G G + + F + G + D + + Sbjct: 102 DYSVILEAIHEAGTIYLYGTGNEQKAIGEEFKRIFLMFGKCCIDLFDYGEVEYASRYFKS 161 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DL +AIS +G + K L+IT +T N + + + LY + Sbjct: 162 GDLFVAISLSGESENGIQVLRFVQCREIKTLSITRWTNNTMARMCRYNLYAGTRMISGGG 221 Query: 240 ASISACHAQGML-TDLLFIALIQQDLELAP 268 A + D+L + ++ + + Sbjct: 222 EPGYEMVATFYILLDMLSVNYLEYERKGHE 251 >UniRef50_B5J441 SIS domain protein n=1 Tax=Octadecabacter antarcticus 307 RepID=B5J441_9RHOB Length = 292 Score = 141 bits (355), Expect = 3e-32, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 109/268 (40%), Gaps = 10/268 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I RY G++++ +++A YL P+ S +A + SS V+FAQ LGY Sbjct: 12 SLIRLIHDRYDGMSKTRQQIAVYLTQNPNDVAVRSVNAIAQNCDIHASSFVRFAQSLGYD 71 Query: 62 GFPALKLALSEALASQPESPSVPIH---NQIRGDD--PLRLVGEKLIKENTAAMYATLNV 116 GF +L+ + LA+ ++ +++ D + ++ + A++ + L+ Sbjct: 72 GFRSLQALFQQRLATAAPGFEARVYALKQELKSRDGLSEADLLRDMVVSDAASVQSLLDE 131 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQ 175 L + +L A + L G S V + + L +G + + Sbjct: 132 IDANDLAKAAEILGDAETVFLLGQLRSAPVVELIRYLLTMVGKKCIMLDPSGGLATHIAR 191 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 P D LLA+S+ E+ +E+ G K++A++ + + L + A L Sbjct: 192 TIGPKDALLAVSFRFYANEVVSIVEEVAAQGRKIVALSDSSLSPLAKSAHVLLAAHEHPG 251 Query: 236 ATNSASISACHAQGMLTDLLFIALIQQD 263 + + A L + +A+ + Sbjct: 252 PLS----RSITAPICLAQAITLAVASRM 275 >UniRef50_A5IZ72 Transcriptional regulator n=1 Tax=Mycoplasma agalactiae PG2 RepID=A5IZ72_MYCAP Length = 288 Score = 141 bits (355), Expect = 3e-32, Method: Composition-based stats. Identities = 48/268 (17%), Positives = 113/268 (42%), Gaps = 6/268 (2%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 L +S+K + D++ + +LS +LA A S+++V +F +K +K + +++ Sbjct: 17 LTKSEKNILDFINSFEQSEFNLSQAELAKLANSSEAAVSRFVRKYHFKDYRNFIASINIK 76 Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR 133 L++ + N + + A+ + E + ++ ++R Sbjct: 77 LSNFQRMYPIKYDNGQEPNPFSV-----IYSSYKYAIENINEESVTENCIKAAELINNSR 131 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRR 193 +++ G G+S + + L+KIG + D H + + +D L+ S Sbjct: 132 NVLIYGSGSSQRRSLDLVANLIKIGKSVVYNSDFHIFFPALANADSNDTLIVFSNNLKST 191 Query: 194 ELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTD 253 E + + G K++AIT N + + + + T +S+ +Q ++ + Sbjct: 192 ESHFVISNAHKNGLKIIAITSKNDNKINKNLDVIIQYQKIQNDTLLVPVSSRVSQMLIGN 251 Query: 254 LLFIALIQQDLELAPERIRHSEALVKKL 281 +LF A+I + + +++ S AL+ + Sbjct: 252 ILFEAIIYNN-DENYNKLKKSSALIDEW 278 >UniRef50_C2JTN9 Transcriptional regulator n=3 Tax=Lactobacillus rhamnosus RepID=C2JTN9_LACRH Length = 268 Score = 140 bits (354), Expect = 4e-32, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 98/279 (35%), Gaps = 19/279 (6%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I ++ +ADY ++ + + VS++S+ +F +K+G Sbjct: 9 DIFILIESCRLNFTAVEQVIADY---HLSKQPAMTIDKSSAHLAVSKASITRFCKKIGLS 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + L +L + V K+ + + + S+ Sbjct: 66 NYKELVFLYKLSLNQET---------------TDLSVSSKITAAYHSLATRSDSHYSQAV 110 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + L R I G G + +F +K ++G + D +++L + ++ D+ Sbjct: 111 IDAFCERLHQHRIIHFFGKGFNSYAGADFQFKFSRVGKYVRVITDENSILMSANFANQDE 170 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++ S G EL A + +L IT + L A L + + + Sbjct: 171 LIMVASLRGDDEELLKAMKIAKQRQVPILLITSNRYSQLVTHADVTLIAASLTKEEALGN 230 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 IS + D+++ I A + SE ++ K Sbjct: 231 ISPQIPILIQLDMVYERYI-HLYADAVSQWLASEQILHK 268 >UniRef50_Q2KXW9 Putative transcriptional regulator n=1 Tax=Bordetella avium 197N RepID=Q2KXW9_BORA1 Length = 289 Score = 140 bits (354), Expect = 4e-32, Method: Composition-based stats. Identities = 55/285 (19%), Positives = 111/285 (38%), Gaps = 8/285 (2%) Query: 1 MN---GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQK 57 M+ RI +Y L + ++ A Y + P + S + A +AGV S++ + A++ Sbjct: 1 MDKRMVDKRIEAQYGELPPALQRAARYAIDNPKSIALQSMRATAAKAGVQASAMHRLARQ 60 Query: 58 LGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 LG++G+ AL+ E LA S + D + +L+ ++ + A L Sbjct: 61 LGFEGYEALRTVYREWLARSAGSFAERATALQSRSDKAGSLARELVLADSGNLAALLEPA 120 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQA 176 + E + +L ARRI + G+ + A F + + + ++ Sbjct: 121 ALEAISAASEILAQARRIYVGGLRSLFPAAFYFNYACGMFRQDTVLLSGIAGTFADDLRH 180 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 + PDD LL SY R+ A G +++++T + + AS + + Sbjct: 181 AGPDDALLMFSYDPYARDAVSAVRFAHARGLRIVSVTDSVVSPIAAPASAVILVANATPS 240 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + L L+ + + + SEA +++ Sbjct: 241 L----FPSVVPALAVAQALVGLLVARGGQANLSEVEKSEAQLREF 281 >UniRef50_B2V3J3 Transcriptional regulator, RpiR family n=2 Tax=Clostridium botulinum E RepID=B2V3J3_CLOBA Length = 252 Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats. Identities = 48/267 (17%), Positives = 102/267 (38%), Gaps = 20/267 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I Y L Q+D ++ +Y+ + + ++ +Q+AN+ VS++++++F +KL Sbjct: 1 MKIYELINNNYDKLTQNDHEIFNYISNNQEQCKDMTCEQVANKCHVSRTTLLRFCRKLNL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F LK L + +D + ++ + T++ Sbjct: 61 NSFAELKYLLKSSA-------------CKVYEDSSLDI-----EKACQTYHKTIDEIKGH 102 Query: 121 KLHECVTMLRSARRIILTGIGASGLV-AQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + +++ +A I + G G + A+ F + G + D+ + + Sbjct: 103 EYKNICSLIYNAETIYIYGTGNAQKAEAEEFKRIFLSAGKCVVDLFDLGEVQLIQNKFTG 162 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE-QATN 238 DL + IS +G E + ++IT F N + + LY + Sbjct: 163 KDLFVIISLSGETIEGIEILKSIESRKINTMSITRFQNNTIARMCKDNLYVSTKMLHGFK 222 Query: 239 SASISACHAQGMLTDLLFIALIQQDLE 265 + S A +L D+LF+ ++ E Sbjct: 223 NLSYEMTAAFYVLLDILFVYYLEYIRE 249 >UniRef50_Q38ZK5 Putative transcriptional regulator, RpiR family n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Q38ZK5_LACSS Length = 248 Score = 140 bits (353), Expect = 5e-32, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 103/250 (41%), Gaps = 15/250 (6%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 + ++++ L DY++ D ++ S ++LA E VS ++ ++F +K+G+ G+ + Sbjct: 1 MNKNEQILLDYVIKNMDDIKNRSIRELAAECFVSTTTFLRFVRKIGFSGYSEFITVIKYT 60 Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIK--ENTAAMYATLNVNSEEKLHECVTMLRS 131 + +Q ++ V V ++ E + T+ V +KL+ VT++ Sbjct: 61 ILNQDQTEEVNPF-----------VVNQVANRTEYLKNINETVRVLDNDKLNAIVTLMTK 109 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGV 191 ++ G S A+ + GF ++ + + DD+L +Y G Sbjct: 110 KPKLYFFAKGFSKYAAEYIEYLYTLKGFIVIFPKNYEQRQLAYRNINQDDILFVFNYEGE 169 Query: 192 RRELNLAADEM--LRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQG 249 +EL + K+++IT N +Q + LY +E + +++ + Sbjct: 170 DKELIEILQIIERKCQYAKLVSITSANNNTIQNMSDINLYLFTDELYQHKVEMTSHVSLI 229 Query: 250 MLTDLLFIAL 259 + +LL Sbjct: 230 AIMELLLYQY 239 >UniRef50_UPI000196B86F hypothetical protein CATMIT_00765 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B86F Length = 281 Score = 140 bits (353), Expect = 5e-32, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 97/255 (38%), Gaps = 2/255 (0%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 + +++K++ DYL+ D LS LA + S +++++ +K GY G+ ALK+ Sbjct: 25 SQENKYTETEKEVIDYLMNHLDLLEELSINDLAKKTYTSNATIIRLCRKTGYSGYKALKV 84 Query: 69 ALSEAL-ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 L + A++ SV + ++ + + + ++ + + L Sbjct: 85 DLIKEREANKYIVESVDYTTPFQFNETTEEIMKNMFSLYQESIKQVYSSLDIDVLKSIAH 144 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAIS 187 + +RI L G + NF KL+K+ + + DD L IS Sbjct: 145 EIIHKKRIFLFSYGDTQTTVINFTNKLVKVNIFPTLATQFGEERHISKRMNKDDYALIIS 204 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHA 247 Y G R L + R K+ IT N+L + E+ ++ + A Sbjct: 205 YRGQER-LLECVQTLSRNHVKIGLITANKKNSLMAYCDDLIMIPDCEKENRISTFYSQLA 263 Query: 248 QGMLTDLLFIALIQQ 262 + L+ + Q Sbjct: 264 FQYVLSNLYAIIYHQ 278 >UniRef50_B5RKH7 Transcriptional regulator, RpiR family n=2 Tax=Proteobacteria RepID=B5RKH7_KLEP3 Length = 294 Score = 140 bits (353), Expect = 5e-32, Method: Composition-based stats. Identities = 69/263 (26%), Positives = 115/263 (43%), Gaps = 3/263 (1%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I R LA S+ K+ D LL+ P ++ Q+A AGVS +V++ A+ +G+ GF L Sbjct: 23 IHARSGDLAASEAKVVDLLLVDPLFVGTSTAAQVATRAGVSPPTVIRAARAIGFTGFTEL 82 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 K+ ++ A + + + D L V E I+ A+ A L E V Sbjct: 83 KIEIARARGTAQFFAPPEV---LTADATLASVLETSIRAGVDALTALSGAIEISALDEAV 139 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 ++RSAR++ G G S VA + ++L G +++D + + + P D+++ + Sbjct: 140 DLIRSARQVFAFGAGPSATVAADAVFRLRTAGVITVSIQDYLSAMIAARLLGPGDVIIVV 199 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S TG AD G ++AIT L A+ L A+ + Sbjct: 200 SSTGRTSSTLSIADAASSAGASLIAITNQYDTPLATLANVSLVVGGMPLPAQMAAAGSRL 259 Query: 247 AQGMLTDLLFIALIQQDLELAPE 269 AQ ++ D L AL +D E + Sbjct: 260 AQLVVIDTLVAALTLRDKEQSRR 282 >UniRef50_C6L8R9 Putative phosphosugar-binding transcriptional regulator n=3 Tax=Clostridiales RepID=C6L8R9_9FIRM Length = 289 Score = 140 bits (353), Expect = 5e-32, Method: Composition-based stats. Identities = 42/243 (17%), Positives = 99/243 (40%), Gaps = 16/243 (6%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLS----SQQLANEAGVSQSSVVKFAQKLGYKG 62 IR +Y+ Q +K +AD+ + + + + ++ +A VS++S+ +FA+K G++G Sbjct: 12 IRTKYESFTQIEKCIADFFTDEERLSGYGTEELAAKNVAERLFVSEASLSRFAKKCGFRG 71 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + + ++L + + ++ + T N+ E ++ Sbjct: 72 YREMIYQYEKSLRDVRRKKHADNN------------IQMVLDLYQEVLNKTYNLVDETQI 119 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V + +A R+ + G+G+SG A + +IG + +++D + +P L Sbjct: 120 LHIVRCMNTANRVYVCGMGSSGQAACEMESRFARIGVDIDSIQDADRMRMQTVFMNPGKL 179 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ +S +G E+ E + + + T L+Q + + + I Sbjct: 180 VIGLSLSGETEEVLYLLRESGKRKAQTVLFTANEREQLRQYCTEVVRLPSFRYMNFGNVI 239 Query: 243 SAC 245 S Sbjct: 240 SPQ 242 >UniRef50_C9KM39 Transcriptional regulator GlvR n=2 Tax=Veillonellaceae RepID=C9KM39_9FIRM Length = 264 Score = 140 bits (353), Expect = 5e-32, Method: Composition-based stats. Identities = 54/279 (19%), Positives = 96/279 (34%), Gaps = 28/279 (10%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I Q L +D + Y+L + ARH+S +LA VS +++V+FAQKLG Sbjct: 1 MRLDEIINTHRQSLNDTDMVIWKYILQHREVARHISIHELAKACCVSSTTIVRFAQKLGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK L P S ++++ + T + Sbjct: 61 DGFGELKAILKMEEQETPRYSS------------------NVLEDLSDFYLKTGEKIFKR 102 Query: 121 KLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++ A R+ G V Q + + ++ + Sbjct: 103 NFDSASRLVHEANRVFTYASGYVQANVLQELKRLFFYDNVFLYDIPAREEFYSVLETLTK 162 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DDL + +S +G + A E+ +++IT N L ++ LY E Sbjct: 163 DDLFIIVSLSGETPAVVEFARELQLRDIPLISITKLHDNTLASLSTVNLYISPAEFQLYD 222 Query: 240 A------SISACHAQGMLTDLLFI---ALIQQDLELAPE 269 A S + ML ++ ++ + + E + Sbjct: 223 AEDGKHISFKSMMPYFMLIEVWYVKYRMYVHRLKERNIQ 261 >UniRef50_C3RNE4 Transcriptional regulator n=3 Tax=Bacteria RepID=C3RNE4_9MOLU Length = 263 Score = 140 bits (353), Expect = 6e-32, Method: Composition-based stats. Identities = 52/261 (19%), Positives = 99/261 (37%), Gaps = 18/261 (6%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + + L +SD + +Y+ + ++ + L + VS++++++F++K+G Sbjct: 1 MQLNELVNLHFDDLNESDLYIWNYINNHREVCTKITIEDLGKKCNVSRTTILRFSKKIGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GF LK L ++ I + Sbjct: 61 EGFAELKYYLRNEQTLADVGLGKTVN----------------IYALFENHAKMIRELQNR 104 Query: 121 KLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + C M+ A+RI + G VA+ + + +K+G V + +A + Sbjct: 105 DYNTCCRMIDHAKRIFVVSSGTIQRSVAKELSRQFLKLGIIMTLVNGDSEINMLARAITA 164 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-N 238 DDLL+ IS TG + A VG K ++IT N+L A +Y + Sbjct: 165 DDLLIIISLTGESESVIRIAKVAKTVGSKTISITRINANSLSLLADEPIYIFFGDFPIVF 224 Query: 239 SASISACHAQGMLTDLLFIAL 259 + ++ LT+LLF Sbjct: 225 ETAYTSPTMFFALTELLFANY 245 >UniRef50_A8S127 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S127_9CLOT Length = 285 Score = 140 bits (353), Expect = 6e-32, Method: Composition-based stats. Identities = 47/288 (16%), Positives = 108/288 (37%), Gaps = 13/288 (4%) Query: 1 MNGL-LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M L R+++ L ++ADY L + ++SS +A E GVS +S+++F++ +G Sbjct: 1 MTILAERLKE--SKLTNQQHRIADYFLKNEERIGNMSSMDVAREIGVSDASIIRFSRAIG 58 Query: 60 YKGFPALKLALSEALASQP-----ESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATL 114 YKGF LK + +LA + + + G + + + ++ + T Sbjct: 59 YKGFTDLKNDIYNSLAGEASAAVRNMQLSDRFDVLSGKFNDQNIPDTFVELMNYNITKTF 118 Query: 115 NVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATV 174 + N E M+ ++R + G+ VA +FA L + + Sbjct: 119 HQNPVESYDALTDMILMSKRKYIIGLRGCMGVAGHFARLLGFAVNQVVTLPHNETEAMGI 178 Query: 175 QA-SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE 233 P+D+ + S+ + + ++ +T + + Sbjct: 179 LQDIGPEDIFILFSFARYYKIDMFLINVAKSHKARICVVTDSPLAPMIPCSDISFIAETS 238 Query: 234 EQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + ++ M+ + + + +++ E +R + +AL + Sbjct: 239 HMSF----FNSAIGVEMIGEYIVTLVCRKNSEEYRKRAKERDALTTEF 282 >UniRef50_D0CS12 Transcriptional regulator, RpiR family n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CS12_9RHOB Length = 329 Score = 140 bits (352), Expect = 6e-32, Method: Composition-based stats. Identities = 45/277 (16%), Positives = 105/277 (37%), Gaps = 6/277 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + R+R++ + + + + Y++ P S + A++ GVS +++++ A ++G+ Sbjct: 38 LIDRLRRQIDHMPEQLQAVTKYIIDHPADFGLDSIRATADKIGVSTNAIIRLAHRMGFSR 97 Query: 63 FPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F + + L + + + ++ P + + +L + K Sbjct: 98 FEDFRAPFRQDLTTDREDRLGQDWLTRMADTGPFGAAQADFARNELNVVSRSLRLLDPAK 157 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSPD 180 + +T++ SA+R +T AS +A F + N + M + + + ++ Sbjct: 158 VETAITLMTSAQRCFVTATRASHALAYYFHYAGRMAHPNLHLIPRHMGSAIDDLLDANQT 217 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D LLAI+ + A + G +++ + A A L + Sbjct: 218 DCLLAITIHPYSSDTIQAMRFARKQGLRLILLADSDVIAPGIDADVTLKISTRSKHL--- 274 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 S+ ++L L Q + A ER+R + Sbjct: 275 -FSSFSGAMAAIEVLLGHLFAQSGDAAAERVRRYQQA 310 >UniRef50_C3RJ39 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RJ39_9MOLU Length = 270 Score = 139 bits (351), Expect = 8e-32, Method: Composition-based stats. Identities = 46/264 (17%), Positives = 97/264 (36%), Gaps = 3/264 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + L ++K +A +LL + +L+S +L ++ SQ++V + +KLG+ Sbjct: 1 MIIEHLLDDN--NLTNTEKSIAQFLLNKDQKINNLTSSELGKQSYTSQAAVTRLYKKLGF 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F L + +P + + L + + AM T + + Sbjct: 59 NNFREFLSTLILERNDYLKYNDLPTEHPEQYFTSLEDTEKVIASLYEKAMIQTNRLLDKN 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ + SA I + GIG S +A+ +KL +G + ++ Sbjct: 119 VVNRVCNRILSASFIDIYGIGLSDTIAKEMCFKLQSLGLPCSYQNGINIKYIDNMQQHQS 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 ++ + I+ TG + A + + I G L Q L + Sbjct: 179 NVSILITTTGDNNLIKEIAKILKNRNVYTVGILGKKGKDLIQLCHDYLLFDT-SLFEDID 237 Query: 241 SISACHAQGMLTDLLFIALIQQDL 264 S+ A + + ++L+ L+ + Sbjct: 238 SLCATFSAEYVINILYATLLYRLE 261 >UniRef50_C3RHW9 Phosphosugar-binding transcriptional regulator n=2 Tax=Bacteria RepID=C3RHW9_9MOLU Length = 248 Score = 139 bits (351), Expect = 8e-32, Method: Composition-based stats. Identities = 56/264 (21%), Positives = 107/264 (40%), Gaps = 23/264 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M R+ Q+ L +D + DY+ HLS Q++A + + +S+++ +KLGY Sbjct: 6 MKFEERVLQQEFTLNDTDDLIVDYIRKNKANLEHLSIQKVAEDLYLVPNSIMRLCKKLGY 65 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGF +K ++ ++ + +KL+ +Y ++ + + + Sbjct: 66 KGFAEMKFLVNNEVSENLD-------------------IQKLLS---KNLYKSMELINYK 103 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L E +++AR G+G S + L + A + + ++ Sbjct: 104 TLEEVAAKIKNARTCHFIGVGESLYFCEMMVDNLRCYDYRAEYYQTYREIEYRIKHCEEK 163 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L IS +G LN +E + G V+++T F N L A LY +EQ N Sbjct: 164 DILFVISASGENGRLNNWVEEAKQNGIFVISVTHFNENRLAGLAHIPLYYWGDEQKLNGY 223 Query: 241 SISACHAQGMLTDLLFIALIQQDL 264 +++ ML L + + Sbjct: 224 NVADRTGMMMLLREL-TEVFWRMY 246 >UniRef50_A6DXB0 SIS domain protein n=1 Tax=Roseovarius sp. TM1035 RepID=A6DXB0_9RHOB Length = 284 Score = 139 bits (351), Expect = 8e-32, Method: Composition-based stats. Identities = 45/279 (16%), Positives = 90/279 (32%), Gaps = 7/279 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M ++ Q L + A Y+L P+ S + +A GV+ ++ + AQ +GY Sbjct: 1 MKIDEKLTQALPNLPRKLAVAARYVLDNPERIAVDSMRSVAQACGVAAPTMQRLAQHMGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +G+ + + L + V D L + + + + + Sbjct: 61 EGYDGFRQDFQKLLMGRGFGARVDALRSTFQSDSLAKLVSHMTEAAQNNIAEVAAHLEPK 120 Query: 121 KLHECVTMLRSARRIILTGIGASGLVA--QNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 ++ V +R + R + G G+ A +L + A + S Sbjct: 121 EVGAFVAAVRRSGRTYVIGAGSMYWAAGMIEATGRLAVPDL-VSLPAGTVAASERISTIS 179 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D +LA+ + A R V AIT + L A Sbjct: 180 SSDTVLALGIAPYCAQTIDAMQYARRASASVYAITDRPSSPLAPYADGLFLAPTASPHY- 238 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + A ++ ++L A + + R+R + + Sbjct: 239 ---FPSAIAVQLVAEILLAACAAASGDASRHRLRQLDEI 274 >UniRef50_C3RLZ3 Transcriptional regulator n=3 Tax=Bacteria RepID=C3RLZ3_9MOLU Length = 252 Score = 139 bits (351), Expect = 9e-32, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 93/269 (34%), Gaps = 21/269 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + Y L ++D + Y+L + +S + LA VS +S+++F +KLG Sbjct: 1 MTLDKLVEDNYHQLNENDLYIWQYILHHKRECQRISIKDLARNCNVSHTSILRFTKKLGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GF LK+ L LA +P ++I + T+ Sbjct: 61 EGFSELKVHLKWDLAQKPNFKP------------------RIIDDTYHEFIETMERMKNR 102 Query: 121 KLHECVTMLRSARRIILTGIG-ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 L + M+ A R+ + G G +A + AV + + + + Sbjct: 103 DLTNIMEMIEKAERVFVYGTGVVQANMAGELRRVFLYTNKVFHAVGNGTEIDTILNNVTK 162 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +DL + IS +G A + + + I L + + E Sbjct: 163 NDLFIIISLSGDNETAVTLARALRGLHIPRIGIAKVGNTLLSKYCDDMITFRYETFKVGM 222 Query: 240 ASI-SACHAQGMLT-DLLFIALIQQDLEL 266 + I A + D LF+ ++ E Sbjct: 223 SDILYGSTAHFFIISDFLFLRYLEYSQEK 251 >UniRef50_Q13RF5 Transcriptional regulator, RpiR family n=3 Tax=Proteobacteria RepID=Q13RF5_BURXL Length = 314 Score = 139 bits (351), Expect = 9e-32, Method: Composition-based stats. Identities = 51/281 (18%), Positives = 108/281 (38%), Gaps = 6/281 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + RI + Y L++ D++LAD +L P ++ +LA A VS+++ +F QKLGY Sbjct: 35 SIESRIAECYDELSEIDQRLADVILSAPGQLAMQTATELAATAQVSKATTTRFFQKLGYA 94 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + A++ A + + L V + ++ + +T Sbjct: 95 SYDD-ARAIARAAQVGGSPLYLQDRGRKNASTKLDDVIQAHLQHEVENLASTYRSLDTRV 153 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL-ATVQASSPD 180 L E V + ARR+++ G S VA +L+++ + + L + S Sbjct: 154 LSEVVEAVAHARRVVIIGYRHSHTVATMIRRELIQVRSDVVLLPAPGDTLGEYLGDLSAK 213 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ + + + LAA + G ++ ++ + A + + Sbjct: 214 DVAIVVGLRRRVPAVGLAATALAEAGVPIVYMSDVIAGKPARLARWVIRCHTDGLML--- 270 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + +L+ + ++ LE ++ E L + L Sbjct: 271 -FDSNVGMTAVVNLICSLVAERLLERGTNHLQRVEILHESL 310 >UniRef50_Q0C066 SIS domain protein n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C066_HYPNA Length = 276 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 44/266 (16%), Positives = 100/266 (37%), Gaps = 12/266 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L+I++ Y+G ++ + +A Y+L P+ + +A GV S+VV+ A+ LG+ G Sbjct: 9 LRLQIKREYEGFSKQLRIVAQYILDHPNEIGLETVTVVAERMGVQPSTVVRLAKVLGFDG 68 Query: 63 FPALKLALSEA-------LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLN 115 L+ + L + + + V ++ ++ + + Sbjct: 69 ASQLQKLFKDEVVNSAGALGYKERIRRYKAPASNAKSNHVSSVLDEALECGILGLEDLRH 128 Query: 116 VNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL-ATV 174 + ++ V ++++A I + G S VA ++ L ++ N + L + Sbjct: 129 SMNASEIATAVKLIQTASTIYVAGFQRSFPVAAYLSYALQRLRKNTIFIDGTGGLYEHQI 188 Query: 175 QASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE 234 ++ DDLL+AI + ++ D+ R K++ I+ + + A Sbjct: 189 SFANKDDLLIAIGFNPYSDQIVATLDQAKRNKLKIVGISDSHVSPVVSGAHAPFIVHDPV 248 Query: 235 QATNSASISACHAQGMLTDLLFIALI 260 + L + +A Sbjct: 249 VR----GFRTLTSSMTLAQAIVLAYA 270 >UniRef50_C0FQ68 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FQ68_9FIRM Length = 218 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 48/216 (22%), Positives = 93/216 (43%), Gaps = 15/216 (6%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + I Y+ ++++ +ADY L D LS++ ++ E VS +S+ +FA+K GY+G Sbjct: 10 IIPTIEANYERYTETERHIADYFLKN-DAIGDLSAEFISTELAVSPASLSRFAKKSGYQG 68 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + + + ++ + + N+ E ++ Sbjct: 69 YREFVYEYRNSYVEKTTVEQEESRL--------------VLDTYQSLLNKVYNLLDEAQI 114 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V LR A+R+ + G G+SGL A+ A + IG + A+RD + +P +L Sbjct: 115 KRIVEKLRMAKRVYVCGRGSSGLAAEEMATRFRWIGIDMVALRDNENIKMQSVFLNPQNL 174 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPN 218 ++ +S +G + E+ R G + IT T + Sbjct: 175 VIGLSLSGTKSEVLYMLARGCRQGADTILITEKTES 210 >UniRef50_C5EHV8 RpiR-family transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHV8_9FIRM Length = 267 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 95/254 (37%), Gaps = 10/254 (3%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 + L+ ++ + ++ + +S Q LA++ S +++++F +KLGY GF LK Sbjct: 4 AVIKSLSNNELNILKFVYEHGEDVPDMSIQALASQVCYSSATILRFCKKLGYSGFAELKY 63 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 AL A +P P ++ + + T + SE++L Sbjct: 64 ALRAAAKKEPSRPGTHKAQDFTTWM--------MMDSLCSDIEGTSKLISEDQLGRTFRY 115 Query: 129 LRSARRIILTGIGA-SGLVAQNFAWKLMKIGF-NAAAVRDMHALLATVQASSPDDLLLAI 186 S+ I L G + +++ F L IG N + ++ + LL+ I Sbjct: 116 FDSSCPIYLWAPGGITSILSDYFEKLLFSIGRQNVYKIESAKMGEHILRNVHTESLLILI 175 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S TG VL+IT +T N + A+ +++ A ++ Sbjct: 176 STTGNFGPTVRLGKIARMNDIPVLSITPYTSNEVAGLATVSFRFFTDQRENRGAEFTSRL 235 Query: 247 AQGMLTDLLFIALI 260 + + + + Sbjct: 236 PVFYVINSIIRCYL 249 >UniRef50_Q02WG9 Transcriptional regulator n=6 Tax=Lactococcus RepID=Q02WG9_LACLS Length = 250 Score = 139 bits (350), Expect = 1e-31, Method: Composition-based stats. Identities = 48/264 (18%), Positives = 95/264 (35%), Gaps = 16/264 (6%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 L ++ + + LS +LA A VS S+V + +K G++G+ + ++ Sbjct: 1 MSNLTNAESYTWQIIQENYEKIPQLSISELAELAHVSLSTVNRTVRKKGFEGYGEFRYSI 60 Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 E + S + I N + T+ S E++ + V +++ Sbjct: 61 REKKLPEINGFSKEVLGAIAK--------------NQEELLKTIENISAEEIEKAVELIQ 106 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 + I++ G S VA KL + D + Q + L++ +S +G Sbjct: 107 ESEEILIFSRGLSTNVADELMKKLQLFRKRVSLHDDSKYMAYYAQFVNEKSLIIVLSLSG 166 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL--YTIAEEQATNSASISACHAQ 248 E+ A K+L++T L + L Y + E + + + Sbjct: 167 ETVEILNALRIAKAQNPKILSLTVNANTNLTNLSDISLIGYKSSLEVNYFDLDVHSRLSL 226 Query: 249 GMLTDLLFIALIQQDLELAPERIR 272 +L+ +L A L+ IR Sbjct: 227 SILSRVLIDAYSIYTLKQGRSDIR 250 >UniRef50_B9DVI9 RpiR family regulatory protein n=1 Tax=Streptococcus uberis 0140J RepID=B9DVI9_STRU0 Length = 258 Score = 139 bits (350), Expect = 1e-31, Method: Composition-based stats. Identities = 55/264 (20%), Positives = 110/264 (41%), Gaps = 16/264 (6%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ RI + L ++DKK+ + LL PD + + Q A S +++V+ A+K+GY Sbjct: 1 MDFKERISVNFTNLTKTDKKIYNCLLEHPDYLINHNVQDAAQLIETSPAALVRLAKKIGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG P LK+ L E+ + P + K++ + + E Sbjct: 61 KGLPDLKIGLEESSQKNQKEPKRQSKK----------IMSKVLNNYRDNIALLESQLDEG 110 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +LH L S+ I + GIG+SGL A+ + L+ ++ + + + + Sbjct: 111 QLHRIAKKLASSDLIKVLGIGSSGLSAEQLVYSLLYQDKYTESITSKTKMYYLSRTLTKE 170 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +LL + TG ++ + VG +V+ +T ++Q A+ + + + Sbjct: 171 HVLLFYTVTG-NKDFEELFEAAKAVGCQVIIVTMVDSPYIRQYATELIVLPSNVMQLRNP 229 Query: 241 S-----ISACHAQGMLTDLLFIAL 259 S + +L+++L + Sbjct: 230 SGDFYQLDNRSLFLILSEILAAYV 253 >UniRef50_A8GCW7 Transcriptional regulator, RpiR family n=1 Tax=Serratia proteamaculans 568 RepID=A8GCW7_SERP5 Length = 380 Score = 139 bits (350), Expect = 1e-31, Method: Composition-based stats. Identities = 50/231 (21%), Positives = 99/231 (42%), Gaps = 6/231 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + +IR R L+Q + K+A +L A + + LA++AGVS +++ +FA+ +G Sbjct: 126 DIVYQIRARQNQLSQQEAKVAQTILDDIAFASSATIELLASQAGVSPATITRFAKTIGCD 185 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 L++ L++A S S + Q + P RL +++ T ++ L Sbjct: 186 DIRDLRMKLAQASVSG----SRYLTAQTTPNGPPRLWLQRVNDVET-TLHQQLQQVEHSA 240 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + + + + + G+ + GL +L+ +G+ A A +D + T S Sbjct: 241 LIDASQQVSQCKSVHIFGVNSMGLYVNELQQRLVGLGYPAFACQDAALMRMTASTLSTQQ 300 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA 232 ++ +S +G +L AA G +A+ + L A L Sbjct: 301 CVILLSLSGENTDLLNAARLAGATGAYRIAL-APAGSTLASLADKVLPLSG 350 Score = 62.7 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 31/71 (43%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + I+ R + + K+A +L P + +QLA AGVS V FAQ LG Sbjct: 1 MDLVYHIQFRQDPFNRQEAKIARTILDNPGFTSTATIEQLAERAGVSTEIVAHFAQSLGC 60 Query: 61 KGFPALKLALS 71 + + Sbjct: 61 QDLNDFISLMR 71 >UniRef50_C5EIL0 RpiR-family transcriptional regulator n=3 Tax=Clostridiales RepID=C5EIL0_9FIRM Length = 251 Score = 139 bits (350), Expect = 1e-31, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 93/261 (35%), Gaps = 21/261 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M R + Y ++++ + YLL D+ LS + A VS+S +V+FA+K G Sbjct: 1 MGLEERFNENYHRFTENEQYICRYLLEHKDSCIRLSITEFAGMCHVSESMLVRFAKKNGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ LK + + D + ++L++ + +++ Sbjct: 61 SGYGELKARFRLEQDTGDRREGELLDLV---TDSYHKMMDELMRRDMTSLF--------- 108 Query: 121 KLHECVTMLRSARRIILTGIGASG-LVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 L ARR+ L G G++ A + + + A + + Sbjct: 109 ------EKLHRARRVFLYGSGSAQTRAASEMKRIFLPV-KEMFHINGHDMRGALSRVVTA 161 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+ + IS +G A+E+ +L+IT N L LY + + Sbjct: 162 KDMAVIISLSGESGATVGLAEELRLRQVPMLSITRMGNNTLASVCDENLYIHSITLPASY 221 Query: 240 A-SISACHAQGMLTDLLFIAL 259 +L + L++A Sbjct: 222 GIEYEISTPYFILIEYLYLAY 242 >UniRef50_A6LRA2 Transcriptional regulator, RpiR family n=3 Tax=Clostridium RepID=A6LRA2_CLOB8 Length = 247 Score = 138 bits (349), Expect = 1e-31, Method: Composition-based stats. Identities = 38/237 (16%), Positives = 91/237 (38%), Gaps = 19/237 (8%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 + + L + + +Y++ D R++ ++LA E+ VS ++++ F +K+G G+ KL Sbjct: 5 SQIKSLNDLEISVYNYIMDNKDKVRYMKIRELAVESHVSTTTILNFCKKVGCSGYSEFKL 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 + + + +I T +EK+ E V Sbjct: 65 KFKLFIEEKEIKKVSEDNTEI-----------------IDFFKKTNTEEYDEKIEEIVKA 107 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + A+R I G SG++A+ A L +G + + D + T + +++ S Sbjct: 108 ILKAKRTIFIGSSMSGIIARYGARYLSSVGQFSLCIDDPYYP--TTGKFYENSVVIVCSV 165 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 +G +++ + + +++IT + + + + + I+ Sbjct: 166 SGESKDIIGHINRFKKDNCCIVSITNTENCTIAKMSDYNIPYYVPYVKVGIYDITTQ 222 >UniRef50_C5EIL1 RpiR-family transcriptional regulator n=2 Tax=Clostridiales RepID=C5EIL1_9FIRM Length = 260 Score = 138 bits (349), Expect = 1e-31, Method: Composition-based stats. Identities = 48/269 (17%), Positives = 97/269 (36%), Gaps = 25/269 (9%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ RI + Y L +D+++ + +L D ++S +LA VS++++V+ +KLG Sbjct: 1 MDLEKRINENYDRLTANDREVLNLILRDKDRTTQMNSPELAAHCHVSRTTLVRLFKKLGI 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F +L L E S ++++ + + Sbjct: 61 STFAEFRLLLQEKSGGGTASRLD---------------MQEILSGYHRMV----DDLKAY 101 Query: 121 KLHECVTMLRSARRIILTGIGASG-LVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++ A I L G G + + F + G + D + + Sbjct: 102 DYDTVCQVIHEADTIYLFGTGNEQKAIGEEFKRIFLMFGKCCIDLFDYGEVEYASRNFKA 161 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE-----E 234 DL +A+S +G + + + L+IT +T N + + + LY + E Sbjct: 162 KDLFIAVSLSGESQSGIDVLRFVQCRDIRTLSITRWTNNTMARMCRYNLYAGTKMIGGGE 221 Query: 235 QATNSASISACHAQGMLTDLLFIALIQQD 263 A A +L D+L + ++ Sbjct: 222 GVKQGAGYEMVAAFYILLDILSVNYLEYM 250 >UniRef50_C6VKP3 Transcription regulator n=3 Tax=Lactobacillus plantarum RepID=C6VKP3_LACPJ Length = 248 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 48/264 (18%), Positives = 107/264 (40%), Gaps = 26/264 (9%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 L+ D + +++ + ++ ++LA A VS SSV++F +K+GY FP K++L Sbjct: 9 IDKLSGVDLAIYRFIVEHDEQIPYMRVRELARGAHVSNSSVMRFIRKIGYDSFPEFKVSL 68 Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 Q P ++ + + + ++ Sbjct: 69 RSETPIQKP--DAPGIQFVQPSAFPADI--------------------TKIIRLAAQLMV 106 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 +A I+ GIGAS + + + + +GFN+ V+D L ++ +++L+A+S +G Sbjct: 107 NADNIVFVGIGASAALGEYASRQTSSLGFNSYVVKDPFYPLLPQLRNTSNNVLVAVSVSG 166 Query: 191 VRRELNLAADEMLRV-GGKVLAITGFTPNALQQRASHCLYT-IAEEQATNSASISACHAQ 248 EL ++ + +++IT + + + + + L EE+ +++ Sbjct: 167 QTSELVEMLNDFVNNPEVNIISITSNLESTIARMSRYALTYRATEERIHQYYDLTSQVPC 226 Query: 249 GMLTDLLFIALIQQDLELAPERIR 272 + + L L + E+ R Sbjct: 227 LYIIEALLREL--RHQEVVQHRFE 248 >UniRef50_D1AK32 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AK32_SEBTE Length = 278 Score = 138 bits (348), Expect = 2e-31, Method: Composition-based stats. Identities = 37/267 (13%), Positives = 106/267 (39%), Gaps = 2/267 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + + + S +A LL +++ + +A + V+ S++ +F +K+GY Sbjct: 10 MSLINILEANLEK-GDSKAVIARVLLRNFYNIPNMTQEHIAKLSFVAPSTIGRFCKKIGY 68 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 K F + ++E + + D + +++ ++Y E Sbjct: 69 KNFIEFRKYVNEYIEKLKMDSMLSDAFYEVADKDVFSFSDEIFSSTMKSLYNAQKSIDIE 128 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + ++ S +I + G+ S ++ ++F + +++ G A + + ++ + Sbjct: 129 TIDKVTDLIISTEKIAVFGLPISQIMGKDFQYHMLRHGKYMEAFTEFKKQVELAESLDEN 188 Query: 181 DLLLAISYT-GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 L + IS T G R+ + + + + + + IT + + Q + + EE Sbjct: 189 SLAIFISKTGGERKFICDILNIVKKCKARTVLITYKQDSYMAQNSDFLINIFYEENGLIP 248 Query: 240 ASISACHAQGMLTDLLFIALIQQDLEL 266 + + + +L+ + +++ Sbjct: 249 RGLISGILYTGVFNLIIMNYLKKIKSK 275 >UniRef50_B2TLN0 Phosphosugar-binding protein n=1 Tax=Clostridium botulinum B str. Eklund 17B RepID=B2TLN0_CLOBB Length = 247 Score = 138 bits (347), Expect = 2e-31, Method: Composition-based stats. Identities = 49/265 (18%), Positives = 113/265 (42%), Gaps = 19/265 (7%) Query: 1 MN-GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M+ + + L ++K + ++ + A+ LS ++A E VS ++VV+ LG Sbjct: 1 MSTLITYFSDKLNNLTYAEKHIFYFINSDLEKAKKLSLTKMAEENNVSTTTVVRMCTDLG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ LK L + + + I ++ +L+ S Sbjct: 61 LSGYSELKYILKNLNTNSTPN------------------IDNYIGTIKTSINLSLDKLSI 102 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + +++ V ++ A+++I+ +G S + + F+ LM+ ++ + + H + +++S Sbjct: 103 KNINKLVDVIHKAKKVIIVSVGLSKPMGEYFSKLLMQANKSSFYIYESHIIDLLDKSTSH 162 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DDL++ IS +G L A+++ K AI ++L + + T +E+ Sbjct: 163 DDLIIFISNSGNTSTLTTVAEKLCYRNFKTAAIVNTPDSSLSKFVDIAINTHSEKNTLYG 222 Query: 240 ASISACHAQGMLTDLLFIALIQQDL 264 I+ ++ D++F I + Sbjct: 223 YDITPRSTLLIILDIIFAYYINKTK 247 >UniRef50_D2EJM8 Phosphosugar-binding transcriptional regulator n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EJM8_PEDAC Length = 249 Score = 138 bits (347), Expect = 2e-31, Method: Composition-based stats. Identities = 40/261 (15%), Positives = 94/261 (36%), Gaps = 24/261 (9%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M +R + L ++++ + +Y+L+ ++ LA +++ +F +KLGY Sbjct: 1 MKFAIRAQNLEYKLTETEENIVEYILVHQAEVINMKIVTLAERFFTVPNTITRFCRKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+ L L + + A + + E+ Sbjct: 61 GGFTELKVELRHELLEKQTG-----------------------NQQLALIEENFGLVDEK 97 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + +L+ AR + + L+A+ + + + + + Sbjct: 98 REIKLAKLLQKARLVNFYAQDQTHLIAELGVECFQVLDSKFQLL-GYEKEVLSRINNGAG 156 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ IS +G + A + G +V+++T + N+L A +Y + E Sbjct: 157 DVFFFISISGETPAIVNLAKKAKERGHQVVSLTNLSNNSLSAIADVAIYCLTEVTYIAGI 216 Query: 241 SISACHAQGMLTDLLFIALIQ 261 ++ ++ LF ++ Sbjct: 217 EVTDKTPMFVILQSLFQRYLE 237 >UniRef50_C0CQ65 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CQ65_9FIRM Length = 285 Score = 138 bits (347), Expect = 2e-31, Method: Composition-based stats. Identities = 55/282 (19%), Positives = 108/282 (38%), Gaps = 9/282 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M R+ Q L ++++K+ + ++ A + QLA GVS S V + QKLGY Sbjct: 1 MTLAERVEQT--KLTRTEEKIVEMVMNDISKAAFFNGAQLAAFCGVSASLVTRLIQKLGY 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + F KL L + + Q +P + + I ++ + A NS E Sbjct: 59 QSFNEFKLEL-QEIYRQEVTPYDIFQKYLSEEGSKNSSIHAFIAQDIENLAAIEQNNSAE 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHAL-LATVQASSP 179 + + A+++ + + AS A+ A L ++ V D+ P Sbjct: 118 TIDAVANAVHKAKKVYILAMFASESPARTLAHYLDRLNIPYQCVFDLGLSKKIEYIRPKP 177 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +D+++A S+ G+ +E+ A + + + +++IT N L + + + L + Sbjct: 178 EDVVIAFSFQGILKEIYEACEYIHQGKTPIISITDTKANRLTRLSDYSLTVSVSGSVFDY 237 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAP-ERIRHSEALVKK 280 + A + +L L R K+ Sbjct: 238 ----SHVATMAMVTILANRLADTFEPEYLFSRFAQIRNEWKE 275 >UniRef50_D0Z271 Transcriptional regulator n=6 Tax=Vibrionaceae RepID=D0Z271_LISDA Length = 285 Score = 138 bits (347), Expect = 3e-31, Method: Composition-based stats. Identities = 42/283 (14%), Positives = 102/283 (36%), Gaps = 10/283 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I +Q + ++++++ Y + +L + GV ++++ +F Q+LG+ Sbjct: 5 DFIDAIN-HFQSMTDAEQRISQYFMANYSVLPFAKIDELCKQIGVGKATLGRFLQRLGFV 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLR-LVGEKLIKENTAAMYATLNVNSEE 120 GF K ++ L +P + + E + + T + ++E Sbjct: 64 GFIDFKKQVTAELTHTLTTPIERYETDNGDLGSSENNLLAQHHTEVLSNLDKTFHNITDE 123 Query: 121 KLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASS 178 + + ++R + ++ + G +S +A F + + D+ L + Sbjct: 124 QFESALELMRQPKGKLYVMGSASSEALATYFYLLARYLRREVILIEADISKLPHQLVDVG 183 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 DD+L AISY + GG ++ +T N + ++ Sbjct: 184 KDDILFAISYHRYSSVTVRLVKWFHQHGGSIIIMTDQAVNPFAAYSDIQFVV----ESAG 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + A + + L L + R + E L ++ Sbjct: 240 NGFFNNRTAGFAVIEGLIKGLSIHKEKEN--RFQRIEGLFEEF 280 >UniRef50_Q1ZB96 Transcriptional regulator n=1 Tax=Photobacterium profundum 3TCK RepID=Q1ZB96_PHOPR Length = 280 Score = 138 bits (347), Expect = 3e-31, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 98/285 (34%), Gaps = 12/285 (4%) Query: 1 MNGLLRIRQR--YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 M+ I L +++++ Y + +L + GV ++++ +F Q L Sbjct: 1 MDKKDFINAVNGLGALTVAEERITQYFMKHYTMLPFAKIDELCKQIGVGKATLGRFLQHL 60 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 G+ GF K +++ LA +P + + K E M T S Sbjct: 61 GFSGFLEFKKHVADELAQTLTTPVERYE--VTQHTDNESILTKHYDEVMFNMTKTFASIS 118 Query: 119 EEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQA 176 ++ + +++ + ++ + G +S +A F + + + D+ L + Sbjct: 119 DDDFERAIRYMQNPKGKLYVMGSASSEALANYFFLLARYLRKDVVWLKADISTLPHQLAD 178 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 + DD L AISY + GG+++ +T N + + Sbjct: 179 VTEDDTLFAISYHRFSTITIRLVKWFHQFGGRIIFVTDQPVNPFVAYCDIQFAVESGSE- 237 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + L + L +Q + R E++ + Sbjct: 238 ---GFFNNRSSGFALIEAFIKGLSRQKEKNN--RFNRIESVFDEF 277 >UniRef50_Q04H60 Transcriptional regulator n=2 Tax=Oenococcus oeni RepID=Q04H60_OENOB Length = 242 Score = 138 bits (347), Expect = 3e-31, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 100/256 (39%), Gaps = 17/256 (6%) Query: 8 RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALK 67 ++ ++ + D+L+ D + + LA VS +SV++ +K+G+ F LK Sbjct: 3 QRNIFNFTSTETDIYDFLMSHKDEVIKSNLRNLAKTIHVSPASVLRCIKKMGFNSFYELK 62 Query: 68 LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 L + I D R + ++ + + Sbjct: 63 FDFRNKLQAIQVYGQSDHLIDISRDFFNRPLLDQYQNT----------------ITDIKN 106 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAIS 187 ++ +++ + GIG SG++A+ + + G N+ +D + ++ +++ +S Sbjct: 107 VIENSKMVFFFGIGTSGILAEYGSRQFANFGINSFYNKDPYYPFQLIEKDISSTVMVVLS 166 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-NSASISACH 246 +G E+ + + K+++IT + + + + + L E+ + + ++ Sbjct: 167 VSGETHEVIKQITSLKNLKCKIISITNTSYSMVAKLSDINLSYNIGEEVFPDEINATSQI 226 Query: 247 AQGMLTDLLFIALIQQ 262 L +LL L ++ Sbjct: 227 PVIFLLELLARELKKK 242 >UniRef50_D0J1V5 Transcriptional regulator, RpiR family n=2 Tax=Comamonas testosteroni RepID=D0J1V5_COMTE Length = 291 Score = 138 bits (347), Expect = 3e-31, Method: Composition-based stats. Identities = 50/286 (17%), Positives = 108/286 (37%), Gaps = 14/286 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + R+R L S+++LA++LL P ++ ++A GVS ++V +F Q+LGY+ Sbjct: 15 SFIARVRAALPQLPPSERRLAEFLLDFPGNLSSYAAAEMAKLTGVSNATVTRFIQRLGYE 74 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + A A + + P V +++ + + T+ S ++ Sbjct: 75 GYEDAR---RHARAQGDNGSPLFLAAASAQGRPTADVIATHLRQASENLAVTIGQISAQQ 131 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNF-AWKLMKIGFNAAAVRDMHALL-ATVQASSP 179 L + L AR++ G + A L + + + L Sbjct: 132 LEDIALALIGARQLFFVGYRQNRNFAAYLRWQLLQALEMPSQVIPGAGETLGEYAAQIGE 191 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +D+++ + R ++ A + +G +++ IT + A L Sbjct: 192 NDVVVIFALRRSVRVVSEFARQARLLGARLICITDHA-SP-APEADWLLRVQTSAP---- 245 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE---ALVKKLV 282 + A ML L+ A +QQ + + E + +++ Sbjct: 246 GPLDNHTALFMLCHLIATATLQQSGQPGRRHMAAIETSHDALDEML 291 >UniRef50_A3VFQ4 Putative transcriptional regulator protein n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VFQ4_9RHOB Length = 279 Score = 138 bits (347), Expect = 3e-31, Method: Composition-based stats. Identities = 52/277 (18%), Positives = 100/277 (36%), Gaps = 6/277 (2%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 + Y L+ ++ DY+ P S + +A+ +G++ ++ + ++ LGY+ F L Sbjct: 1 MASNYDALSARLREAGDYIAANPLDTATRSLRAVADHSGLAPATFTRLSKALGYENFEEL 60 Query: 67 KLALSEALASQPESPSVPIHNQIRGDD-PLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 + + L + S + D + + + + + + K Sbjct: 61 REGMRRRLERRQASFAARADALQGASDGGSADLIRRTREASLTNIDRLTDEIDTAKFDTI 120 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFN-AAAVRDMHALLATVQASSPDDLLL 184 L +ARR++L G S +A+ A+ +G N A R ++ A + D L+ Sbjct: 121 ADHLHAARRVVLLGGLGSTAIAEYAAYMGNFLGDNWMPAGRMGASVGAALSDLDRRDALI 180 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 + AA+ G VL +T + AS + E S+ Sbjct: 181 VFTKPPFANTSIRAAEFARARGVYVLVVTDTHTCPALRHASARVVVPTESPNF----FSS 236 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 A + L + Q+ A ERI E + L Sbjct: 237 YVATMFFVETLMAMIAQRAGPTATERIADVETANRAL 273 >UniRef50_A9IJZ1 Putative regulator (SIS family) n=4 Tax=Bordetella RepID=A9IJZ1_BORPD Length = 324 Score = 137 bits (346), Expect = 4e-31, Method: Composition-based stats. Identities = 50/286 (17%), Positives = 99/286 (34%), Gaps = 12/286 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R++ + L ++ A ++ P S ++ A GV+ +++++ A+ GY Sbjct: 21 VQQRLQSLLEQLPPELQRAAHWVADHPAEVGLWSMRRQAQALGVAPATMLRLARAAGYDS 80 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVG--EKLIKENTAAMYATLNVNSEE 120 + A + +ALA + + +++ + L + A+ + ++NS Sbjct: 81 YEAFRAPFQQALAGERPASLRERAAELQAAHGSAGAPGHDALTELQARAIQSVCSLNSSA 140 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASSP 179 V L AR++ G ++ +A + + N+ + TV Sbjct: 141 AFDASVKTLLEARQVGFLGTRSAFGIAFQMHYAYQLVRRNSVLIDGLGGLQAETVDNLRD 200 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT------IAE 233 D L+AIS + A + + G V+A+T T + L A H L Sbjct: 201 GDALIAISQSPYPSASVRLARQAAQQGVAVIALTDDTLSPLAVDARHVLLFERPDREGVR 260 Query: 234 EQATNSAS---ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 Q L + L L + E R+ E Sbjct: 261 HQPAQRGPGSFFHTTAGLLGLAEHLIARLTARGGEEVLNRLSEIED 306 >UniRef50_B5ZFL0 Transcriptional regulator, RpiR family n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZFL0_GLUDA Length = 285 Score = 137 bits (345), Expect = 4e-31, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 95/272 (34%), Gaps = 8/272 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 IR RY L + ++AD ++ PD + +A+ AGV S++++FA+ G+ G Sbjct: 18 LRDDIRARYDSLPKRLAQVADAIMAAPDDFTFGTVSSVASVAGVQPSTIIRFARAFGFHG 77 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDD---PLRLVGEKLIKENTAAMYATLNVNSE 119 F +++ E L + + + D P ++ E ++ Sbjct: 78 FSDMQVVFRERLRGRASTYQARLDALRGPDGASPPATMLLEGFAHALEQSLTRLRASIDA 137 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFN-AAAVRDMHALLATVQASS 178 E+L +L A + + G+ S VA ++ L K+ ++ Sbjct: 138 ERLERACAVLAEAETLFVLGLRRSAPVADYLSYLLNKLSIRHVDVRSATGMEDEIASFAT 197 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D + ISY+ R ++ VG + +T + + EQ Sbjct: 198 HRDAAIVISYSPYARRTIEVFNQFQAVGVPTIVLTDSPFSPVVPAGGLWFEI--LEQDFQ 255 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPER 270 + A L L ++ + +R Sbjct: 256 G--FRSNAAATALVMTLATSVAKIRDVKGRKR 285 >UniRef50_A6UKE0 Transcriptional regulator, RpiR family n=4 Tax=Alphaproteobacteria RepID=A6UKE0_SINMW Length = 299 Score = 137 bits (345), Expect = 4e-31, Method: Composition-based stats. Identities = 56/276 (20%), Positives = 102/276 (36%), Gaps = 9/276 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RIR+ L S++K+A+ +L + Q+LA + GVS S+ +F K+G G Sbjct: 9 IRTRIREAAAQLTASERKIANAILADYPFTGLENIQELAAKTGVSAPSITRFVNKIGCGG 68 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F L+ L L SP +Q + + +A M + S+ + Sbjct: 69 FQDLQRQLIAELKEGRRSPLDLKSSQKPVGHS--DFLSEYVARVSAVMREMTGMVSQAQF 126 Query: 123 HECVTMLRS-ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASSPD 180 + +R I L G S +A + L +I + D V Sbjct: 127 DILAELFADPSRNIFLLGGRVSDSIASFLSIHLRQIRSGIYHMADNPEFWPEHVLRMRRK 186 Query: 181 DLLLAISYTGVRRELNL-AADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D++L I + + L AA+ + G ++ +T + + A H + E Sbjct: 187 DVVLLIDFRRYQLSLARLAANIAEKRGATIVVVTDKWMSPAARSADHIVALPIE----AG 242 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 + A L + L + + + D +RI+ + Sbjct: 243 TAWDTVAAAMALVEALIVRVSEADWGATQKRIKDWD 278 >UniRef50_A1WL40 Transcriptional regulator, RpiR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WL40_VEREI Length = 285 Score = 137 bits (345), Expect = 5e-31, Method: Composition-based stats. Identities = 57/275 (20%), Positives = 109/275 (39%), Gaps = 8/275 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + QR+ GL + A +L+ P+ A + + L+ AG+ S +++ A+ LGY G Sbjct: 13 LKELVTQRFDGLPVRLQAAARHLVDHPNAAAVDTIKSLSGAAGLQPSVLMRLAKTLGYSG 72 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLR---LVGEKLIKENTAAMYATLNVNSE 119 F ++ +AL SQ +S + + R + + L + + ++ + Sbjct: 73 FSEMQSVFRDALLSQTQSYGERMRTRGRRATAPQASGDMLRLLCEGSIESLQGLRDAIDA 132 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA-SS 178 + L + + +L AR I + G+ + +A + L + + M +L Sbjct: 133 QSLRDAIEILAGARSIHVLGLRRAWPIATYLVYLLSRSRRVVRLLGGMAGMLPDEVQALQ 192 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P D+L+AIS+ + A + G V+A+T + + A L E Sbjct: 193 PGDVLVAISFHPFHADTVAAVERAHAQGVSVVALTDGALSPFARHARTVLEVRDAE---- 248 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRH 273 A A L L + L+ ++ A RH Sbjct: 249 IAGFRTVAASMALCHGLAVGLVMKEESGAARGKRH 283 >UniRef50_B0NY53 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NY53_9CLOT Length = 266 Score = 137 bits (345), Expect = 5e-31, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 105/278 (37%), Gaps = 21/278 (7%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N I++++ L ++D ++ Y++ + + +S QQLA VS +++++FA+KLG+ Sbjct: 5 NMEELIQKKFDILNENDLQIWAYIVRHKEQCKQISIQQLAVFCHVSHTTILRFAKKLGFS 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ ++ L ++ EK + N + A + + Sbjct: 65 GYSEMRSFLKWEDKAEILYE------------------EKDMDRNANSFIANIRRFEDMD 106 Query: 122 LHECVTMLRSARRIILTGIGASG-LVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + M+ SA RI G G++ L AQ+ K + G + + + + Sbjct: 107 MDKVCQMIESASRIYTQGSGSTQKLAAQHLKEKFLYQGIFINTIEGASEFEFLSEKFTEE 166 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE-QATNS 239 DL++ S +G + G K++ I A L +EE Sbjct: 167 DLVIFYSLSGQNEKQIRKMRSAKESGAKIIGIAMQGKGEFYDLADEVLTFQSEEIHTIGY 226 Query: 240 ASISACHAQGMLT-DLLFIALIQQDLELAPERIRHSEA 276 + + + L + ++ L+ ++E Sbjct: 227 GFLYYPTLHFHIVNEFLTLKYMEHQLKKQEAITENNEE 264 >UniRef50_A5IVA6 Transcriptional regulator n=63 Tax=Staphylococcus RepID=A5IVA6_STAA9 Length = 254 Score = 137 bits (344), Expect = 5e-31, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 94/261 (36%), Gaps = 20/261 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I + + L +D +A ++ D +++ Q LA S +++ +F +KLG+ Sbjct: 1 MFLDEHINRNFDKLNDNDLHIAHFINTHIDECKNMKIQDLAQFTHASNATIHRFTRKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ K L + + I + +T + Sbjct: 61 DGYSDFKSYLKFE------------------SNKTHQLPSNSIDSFKQEIDSTFSYLERV 102 Query: 121 KLHECVTMLRSARRIILTGIGASGL-VAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + +A I L G G + L VA L+ + + + D H L + S P Sbjct: 103 DYQLLTEKMHTASTIYLYGTGRAQLNVASEAQRILLTLHNHVIVLHDEHELKMILNKSEP 162 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-N 238 +DL IS +G EL + + +++T N L Q+A++ +Y + + Sbjct: 163 NDLFFIISLSGETHELLEVTNLLQLRQKYFISVTTMKDNTLAQKANYNVYVSSNTFYLTD 222 Query: 239 SASISACHAQGMLTDLLFIAL 259 S+ + + + L Sbjct: 223 GTDYSSFISYHIFFETLVRKY 243 >UniRef50_Q98AI2 Mlr5989 protein n=1 Tax=Mesorhizobium loti RepID=Q98AI2_RHILO Length = 293 Score = 137 bits (344), Expect = 6e-31, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 104/277 (37%), Gaps = 6/277 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 I + + + A ++ PD S + LA+ A VS +++++ Q L + G Sbjct: 6 IQALILEMLPDMPRQLALAARHIADHPDQVLVHSMRDLASRASVSPATLLRLTQTLKFDG 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + + + L S P++ + + L + + A + VNS E L Sbjct: 66 WAEFRAVYARQLLSAPDAYAERASRALDR-SGLPALLHESFAAQRANLDHAAGVNSPEAL 124 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATV-QASSPDD 181 +L A R+ ++ + FA+ + N + + LA P+D Sbjct: 125 ARSAAILAEADRVFISAFMSCRGPGLTFAYLCRLLRDNVFLLGGEGSPLAADLALLRPED 184 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L I++ RE++ A + G K++ ++ + + A L E + Sbjct: 185 AVLTINFQPYGREIDGVARAVGEGGAKLVCLSDSRATQVTRVAREVLIFPVEGPSF---- 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + A L + L IA++ + A RIR E Sbjct: 241 FPSLTAAHALVECLAIAVLTHLGDSATRRIRLIEDAY 277 >UniRef50_UPI00016A9B9D transcriptional regulator, RpiR family protein n=2 Tax=Burkholderia oklahomensis RepID=UPI00016A9B9D Length = 291 Score = 137 bits (344), Expect = 6e-31, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 96/280 (34%), Gaps = 5/280 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L R+R Q + ++K++A L+ + ++AN AGVS ++V +FA+ LG+ G Sbjct: 8 LLYRLRAALQTFSPAEKRVAMTLIADYPITGLKTLVEIANAAGVSPATVSRFAETLGFTG 67 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 FP + AL E +A++ SP + +V E Sbjct: 68 FPDFQRALHEDVAARFSSPGLQFDKTPERGADSGRPHASAKALGKLVTETVASVERREVE 127 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQASSPDD 181 ++ R + G SG +A+ F +L + ++ + + Sbjct: 128 LLIEKLIDPKRTVYFLGGRHSGSLARYFQQQLHHLRSRTVLFDGVNADAIDALIEFDARS 187 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L+A + + + V T + + AS + Sbjct: 188 VLIAFDFRRYQHDTTRFVAAASARRAHVAVFTDPYMSPAVKHASQVFLCRTATTS----P 243 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + L D L L ER+ E++ ++ Sbjct: 244 FDSYASGLALIDFLTQELATAFGAAGHERVSKLESVREEF 283 >UniRef50_B5XW96 SIS domain protein n=11 Tax=Enterobacteriaceae RepID=B5XW96_KLEP3 Length = 300 Score = 137 bits (344), Expect = 6e-31, Method: Composition-based stats. Identities = 44/278 (15%), Positives = 99/278 (35%), Gaps = 12/278 (4%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 R R R L+ + + Y+ + ++ ++A S ++VV+ Q LG+ G Sbjct: 17 ERYRARAHQLSPRLRAVVSYINDNREVVLEHTAMEIATATQTSDATVVRAIQALGFAGLR 76 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 LK + + S + + +++ + ++ + + Sbjct: 77 ELKQTMERWFGTSVTSAKKMRSTVTALSSDVNSSIDFVLEGHQRVCEVLSRADNRAAVAQ 136 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSPDDLL 183 V +L AR++ + GIGASG++A+ A +IG A + L + D+L Sbjct: 137 AVALLSDARQVGIFGIGASGILAEYTARLFSRIGLPAYVMNRTGFSLAEQLIGLQRGDVL 196 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + + RE E R+G + +T + Q A + S Sbjct: 197 IMMGQKSPHREGMTTLREAKRLGIPTILLTQAVDSRFSQEAQVVIDVPRGGD-------S 249 Query: 244 ACHAQ----GMLTDLLFIALIQQDLELAPERIRHSEAL 277 + + +++ +++ + + ++ L Sbjct: 250 SRMPLHGTVLVCLEMIVLSVASTTPQKTVKSLKRINDL 287 >UniRef50_B1HYT1 Transcriptional regulator n=2 Tax=Bacillaceae RepID=B1HYT1_LYSSC Length = 291 Score = 136 bits (343), Expect = 7e-31, Method: Composition-based stats. Identities = 40/279 (14%), Positives = 112/279 (40%), Gaps = 9/279 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ I++R+ L++ +K+A +++ P+T + ++ A VS+S+V++F + Sbjct: 4 MSIREDIKKRFVRLSKGQRKVAQFVMDNPNTVIANGAAEVGRLANVSESTVIRFCYAMDL 63 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ L+ + + SQ ++ + K+++ ++ + T+ + +++ Sbjct: 64 SGYVELQEEIRGYIMSQDVGTNLQSTYTGNKL--VNSSFGKVMQRDSRNIQETIQLINDQ 121 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNA-AAVRDMHALLATVQASSP 179 ++ + A I + G + +A + L + N D ++ + Sbjct: 122 QIQTSSKWMHEAENIYILGTREAVSIANWLSNTLKTLRSNIKQLRIDSDEIMNQINNMGE 181 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ-ATN 238 L+ +S+ +++ + K++AITG + +++ A+ + + + Sbjct: 182 RTTLIVLSFDQQLKDIQTIVEIAKMKKVKIIAITGTAFSPVREYANILFALGTNKHSSLD 241 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + L +I QD + + +E + Sbjct: 242 IVPV-----LFSFLHALLEEMINQDKGQYEKYQKSNEQV 275 >UniRef50_C5EP41 RpiR family transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EP41_9FIRM Length = 287 Score = 136 bits (343), Expect = 7e-31, Method: Composition-based stats. Identities = 44/284 (15%), Positives = 101/284 (35%), Gaps = 13/284 (4%) Query: 5 LRIRQRYQ--GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R+ R + L +++ADY + ++SS +A E GVS +S+++FA+ +GY G Sbjct: 2 DRLSDRLKGAKLTPQQRRIADYFFKNQERIGNMSSMDVAKEIGVSDASIIRFARAIGYLG 61 Query: 63 FPALKLALSEALASQP-----ESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 F LK + +L + + + G + ++ + T N Sbjct: 62 FTDLKNDIYNSLIGETSASVRNMQLSERFDVLTGRYQEDDIPGSFVEMMNYNITRTFQQN 121 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA- 176 S E M+ +RR + G+ V+ +F L + Sbjct: 122 SLESYEALADMIIRSRRKYVVGLRGCMGVSSHFTRLLGFAIKGVVQMPGSSETEVVGALQ 181 Query: 177 -SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 +D+ + S+ + L + ++ +T + Q A L Sbjct: 182 DIDSEDIFILFSFARYYKIDMLLVNMAREHKARICVVTDSLMAPMVQYADIALLVETSHM 241 Query: 236 ATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + ++ M+ + + + +++ + +R + + + + Sbjct: 242 SF----FNSAIGVDMIAEYIITLVCRKNKDEYRKRAKERDTVTE 281 >UniRef50_Q5WG85 Transcriptional regulator n=3 Tax=Bacteria RepID=Q5WG85_BACSK Length = 245 Score = 136 bits (343), Expect = 7e-31, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 115/255 (45%), Gaps = 14/255 (5%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I + Y+ L S+K++ Y++ D H+ LA VS++ ++ AQKL + GF + Sbjct: 4 ILKNYEELTVSEKRVLSYIMENQDQIPHIKINDLAEATFVSKTVIINLAQKLDFSGFREM 63 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 K +S+ + + + + ++ +++K +M T ++ +EE+L + Sbjct: 64 KYYISQRIIEK-----------MSAQETSTVLYREILK---QSMDKTFSLVTEEQLQKTA 109 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 +++A+ + + G S V L+ IG ++D + + +D+++ I Sbjct: 110 AKIKAAKNVFIMARGTSKAVGYYLEHLLLTIGIQCIFIKDYNLSEVFTDFVAEEDIVIFI 169 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S +G +++ A ++ ++++IT F N L + ++ L+ ++ T+ + Sbjct: 170 SLSGDTKKIINTAKKIHLKKAEIISITSFKTNELTRYTTNNLFCYTDKTNTSKNDTISRT 229 Query: 247 AQGMLTDLLFIALIQ 261 + DLL L Sbjct: 230 GFFLTIDLLVDKLAN 244 >UniRef50_UPI0001909264 RpiR family transcriptional regulator n=1 Tax=Rhizobium etli CIAT 894 RepID=UPI0001909264 Length = 309 Score = 135 bits (341), Expect = 1e-30, Method: Composition-based stats. Identities = 43/277 (15%), Positives = 102/277 (36%), Gaps = 6/277 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + +R+R G + S++ LA Y+L + + +A GVS+ +V +F + LG++ Sbjct: 21 DIEAILRERMSGFSPSEQSLAGYILDNIEILPFETGSSIAEAVGVSEMTVTRFVRGLGFE 80 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 LK L A++ + + + + D + ++ ++ A+ + + E Sbjct: 81 SLRDLKKRLRVAVSEKDSEVDDYL-ARFQMRDGRQPQLQESLRLELDAIVKAYALTTTEV 139 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 E +L AR I + G AS +A +FA +L+ N + + + + P Sbjct: 140 WDEAAGLLVKARIIYVVGFQASKGLAMDFASRLLWARPNVIFIDNSSGTFGEIINADPKQ 199 Query: 182 -LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 ++ I +++ + ++ +T + + Sbjct: 200 SAVVLIDTASYATRGIKLVEKLKSMDMPLVIVTDKFSHWAFAYTRFVFEAHTHVKTFWD- 258 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + + ++ +LL A+ + A + Sbjct: 259 ---STASISVVLNLLIDAVATKLGPKAKRNFAMMSDM 292 >UniRef50_C2HBU5 RpiR family transcriptional regulator n=3 Tax=Enterococcus faecium RepID=C2HBU5_ENTFC Length = 255 Score = 135 bits (341), Expect = 1e-30, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 92/262 (35%), Gaps = 19/262 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I Q + L++ D+ + +++L P ++L LA VS+SS+++ +KLG+ Sbjct: 1 MELEKLIHQHAEKLSELDRGILNFILSDPSLIQNLKITDLAERLYVSKSSIMRTTKKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ K L + + E + ++ + TL+ Sbjct: 61 SGYSEFKYFLR----------------HVTNKENGLRTKEDIFEKQLEDIQQTLHYMKAV 104 Query: 121 KLHECVTMLRSARRIILTGIGASG-LVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 L + L ++ I G S V F ++ IG + + + + Sbjct: 105 NLKPILQCLDRSKMIYCYATGFSQKKVIDEFYKMMLGIGKRVMVLPNKTEFDMAMPLITL 164 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN- 238 +D+ + +S +G E+ VL IT N + +++ L Sbjct: 165 EDMAIIVSMSGETHEVKENLTAFELQKIPVLTITAAGDNYFTRHSTYHLNYYCNCFILGK 224 Query: 239 -SASISACHAQGMLTDLLFIAL 259 + + + L D L A Sbjct: 225 ENKPFQSLISLSCLADYLVRAY 246 >UniRef50_UPI000196AB39 hypothetical protein CATMIT_01159 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196AB39 Length = 243 Score = 135 bits (341), Expect = 1e-30, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 100/254 (39%), Gaps = 21/254 (8%) Query: 8 RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALK 67 ++ + + +D ++ +Y+L ++S ++LA+E S +S+++F +K+GY FP LK Sbjct: 4 EEKIKSFSTTDMRIYNYILKHSIQFPYMSIRELADEIPTSTASIMRFVKKMGYDSFPELK 63 Query: 68 LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 A + + D +K + E Sbjct: 64 YAYKKEEKE-------VSLYMVNDLDETIDCLKKFNTPYYQDL-----------FKEIAY 105 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAIS 187 +L A II G+G S +A+ A + GF +AA+ D + + + +++ +S Sbjct: 106 ILGDANMIIFDGMGDSAKIAEYAARRFSSNGFFSAALTDPYQ---KISMDGTNIVVVMLS 162 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHA 247 +G EL A+ G ++ IT N L + + + + + +S + Sbjct: 163 ISGDTVELFRKANAYKAAGSTLITITASDDNTLAKMSDYHISYYINDVRNELSSHTTQVP 222 Query: 248 QGMLTDLLFIALIQ 261 + ++L + Sbjct: 223 ALSIIEILSNMTLH 236 >UniRef50_A1BB42 Transcriptional regulator, RpiR family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1BB42_PARDP Length = 336 Score = 135 bits (341), Expect = 1e-30, Method: Composition-based stats. Identities = 58/274 (21%), Positives = 109/274 (39%), Gaps = 5/274 (1%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 R +R L+ + +++A Y+ S+ ++A AG S ++V++ Q LG+ G Sbjct: 49 ERYERRRDRLSPAFQRVAGYIDANRLAVLTSSAIEIARAAGTSDATVIRTVQALGFAGLQ 108 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 L+ L+ L + ++ + + L+ A + + E L + Sbjct: 109 ELRRELAAGLGQRTTPADNLKRTLDDAEEQIDAAVDNLLDVYAAGLEVLRSAGFRENLMK 168 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA-SSPDDLL 183 ++ L ARRI + GIG + +A FA +L + G + A LA +P D + Sbjct: 169 ALSALNDARRIFVFGIGPTAHIAAYFAARLRRKGRQQQVIDRTGAGLADQLLELAPGDAV 228 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + ++Y + +E N E R+ V+ I+ + L RA L + + Sbjct: 229 VMLAYGSLYKEANATLAEARRLRLPVILISDSAQSELSSRAQVVLAVPRG----RNDRFA 284 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 ++L + L D E A + E L Sbjct: 285 LHGVTVFCLEMLLLGLAAGDSEKALAALADLERL 318 >UniRef50_Q1IJW8 Transcriptional regulator, RpiR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJW8_ACIBL Length = 294 Score = 135 bits (340), Expect = 1e-30, Method: Composition-based stats. Identities = 52/276 (18%), Positives = 100/276 (36%), Gaps = 9/276 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ RI Q L+ +++ P LS + +A++ G +++V+ AQ LG+ Sbjct: 17 MSQAERIAQ----LSPRRREIVRPAFEDPRRFVLLSVRDMADKLGTDPATMVRIAQNLGF 72 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + + + L L+ + + D + V + + + A N E Sbjct: 73 ESYKEFQHYL-HELSVVRATSLDTLEASASTDSDVVSVMRACLDQELKNIRALYNGLDLE 131 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 KL + ARRI++ G A+ + + IG A A + V++ Sbjct: 132 KLGTAARRMWRARRILVVGGDAATSLVSYTEYHFNVIGLPAYAATSPGVAVHAVRSLGKS 191 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+LLAIS+ R A + G + IT + + + A + + Sbjct: 192 DVLLAISFRRGLRMTIEAIQQARNAGAYCIGITDTYISPVARFADEFFLAGIDSNSFGV- 250 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + A L ++ +A+ Q E + Sbjct: 251 ---SYSAPMCLLNVFLVAIAQAQRAKTLEVMTKVAE 283 >UniRef50_B0G8I7 Putative uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G8I7_9FIRM Length = 275 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 110/274 (40%), Gaps = 14/274 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + I++R L + +A Y++ PD +++ ++L+ + GV++ +++ LGY Sbjct: 1 MDIIESIKKRSTELTRKQYMVAKYMIDHPDEMAYITLKELSRDIGVTEITILNTCASLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIR------GDDPLRLVGEKLIKENTAAMYATL 114 + F +K + + + ++ + + D V ++ E A+ Sbjct: 61 ESFTQIKYEFRKDIIQKQKTDVLDDSSVYTEKVPKYEHDNREKVLAEIGDEEVKAITDYW 120 Query: 115 NVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMK---IGFNAAAVRDMHALL 171 +K E ++ ++++I + G G S +A+ +L +G A + Sbjct: 121 KNIDLKKYFEAADLILNSKQIFICGRGISWTMAEYMKNRLSSCEVLGITANT-ELNDDVY 179 Query: 172 ATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI 231 + + + + LL+ IS+ + K+LAIT A+ Q A L Sbjct: 180 GMLTSLTEESLLIPISFPDYYFMTTKVTERARMQNAKILAITDRLDTAVAQCADLTLTAP 239 Query: 232 AEEQATNSASISACHAQGMLTDLLFIALIQQDLE 265 + ++ + ++ +LL A+ + + Sbjct: 240 TMTRVF----LNTLTSPMLMLNLLTSAIKLKQGK 269 >UniRef50_Q13FP6 Transcriptional regulator, RpiR family n=3 Tax=Proteobacteria RepID=Q13FP6_BURXL Length = 280 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 40/281 (14%), Positives = 95/281 (33%), Gaps = 11/281 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + R+R L+ ++++LA+++L P ++ +L A VS ++V +F + LGY Sbjct: 7 SFVGRVRATMDALSATERRLAEFVLEFPGDLASYTAAELGKLANVSNATVSRFFRHLGYS 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + + + + + A + T S+ Sbjct: 67 SYEEARRHVRDDKKDGAALLLTGADAGQDEQG-----VAAHAQLGIANLTRTFAELSDAM 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA-SSPD 180 L E + A+++++ G +S A F W+++++ A+ L Sbjct: 122 LDEIAGAVVGAQQVLVFGFRSSQAFASYFRWQILQVVERVIALPGPGETLGEHLVGLDRK 181 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +++ + + + R G +V + + A+ + Sbjct: 182 SVVIVFGLRRRVPQTDAVIEYAARAGARV-LYVTDRSSPARAGATWTIICETSAP----G 236 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + A + L + QQ +R+ E+ L Sbjct: 237 PLDNHVAVLGVCGALATKVFQQASSQGRKRLSGIESAHDAL 277 >UniRef50_A9WLS8 Transcriptional regulator, RpiR family n=1 Tax=Renibacterium salmoninarum ATCC 33209 RepID=A9WLS8_RENSM Length = 214 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 2/206 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + L + ++A + A +L+ +LA +A S+ +V++ + LG+K Sbjct: 3 DFQALVSAHLNELTPAAYRVASVITDNLGEAVNLTISELAVKAKTSEPTVLRVCRVLGFK 62 Query: 62 GFPALKLALSEALAS--QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+P L+LAL+ + E + D L V K+ T + TL Sbjct: 63 GYPQLRLALASEIGRIAGAEEGLGLPETALHPHDSLADVVAKVRFNETRGIDQTLAAADL 122 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L+ T+L A +I L G+GA LVA++ +KL ++G AA + H L Sbjct: 123 DNLNTIATVLDGAEKIHLYGVGAGDLVAKDMYYKLFRVGRQAAVYTNPHDALMGAALMGK 182 Query: 180 DDLLLAISYTGVRRELNLAADEMLRV 205 D+ +A S++G + Sbjct: 183 RDVAMAFSHSGTTVLTLDFITTAQKA 208 >UniRef50_A5G0Y8 Transcriptional regulator, RpiR family n=7 Tax=Proteobacteria RepID=A5G0Y8_ACICJ Length = 314 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 51/284 (17%), Positives = 101/284 (35%), Gaps = 11/284 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + I +Y L+ +K+A ++ P+ S +A SS+V+FAQ+ GY G Sbjct: 19 IVNLITAQYPNLSSGFQKIARFVTQNPNVVALESISVIALRCDTHASSLVRFAQEFGYSG 78 Query: 63 FPALKLALSEALAS-----QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 F L+ LA+ + ++ L+ + AA+ L Sbjct: 79 FKELQAVFQTRLATAAPGFRERVKALDGELSRHARSGNLGYLRDLVVRDIAALQDLLERV 138 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQ-A 176 E+ L ++ A I + G S +A + L + + L + Sbjct: 139 PEDTLTGAARLITGADTIYIAGQLRSEPIALLLRYLLTMLHRRVVLLDPAGGLAQEMAET 198 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 + D+L+AI++ +E+ ++ G V+AIT + + + A +E + Sbjct: 199 MTRGDVLVAIAFRHYAQEVVAISERAAASGTPVIAITDSQLSPIAKDAKALFTVPEDEYS 258 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A L L +A + + + + +K Sbjct: 259 FA----RTLAAPMCLVQCLAVASAAIL-QRGRDEMPRIPTVTEK 297 >UniRef50_C8WCY0 Transcriptional regulator, RpiR family n=3 Tax=Zymomonas mobilis RepID=C8WCY0_ZYMMN Length = 305 Score = 135 bits (339), Expect = 2e-30, Method: Composition-based stats. Identities = 52/282 (18%), Positives = 110/282 (39%), Gaps = 10/282 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + I Q + Q+++++A L A + +L +A VS +V++F KLG+ Sbjct: 12 NLAILIHQASENFTQAERRIAQILFASDMMAGLETVAKLGAKAKVSGPTVLRFVSKLGFS 71 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKEN----TAAMYATLNVN 117 FP + +L L + + + R +++E M+ TL Sbjct: 72 SFPEFQASLRGELYQKLIYNTPQNQDDTANHVSDRPAVASVLQEADSFFENCMHRTLQQI 131 Query: 118 SEEKLHECVTMLRSARRI-ILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQ 175 + +L + +L R + G + +A+ F ++L ++ V + + Sbjct: 132 NACELEDVTELLADCSRNVYIVGNHLTHPIAELFWYQLHRLRPRTHLVQNNAFTPYEQLI 191 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 S D+LL + ++ L A++ + ++ IT + + + A H L Sbjct: 192 DSGRRDILLLFDICHYQEDIALLAEQAHQRRTTIILITDPKLSPVSRLAHHVLTC----D 247 Query: 236 ATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 T S + ++ +LL +L ++ A R ++ E Sbjct: 248 FTLFTSHESLVPCLVMVELLAASLEKKLGADALIRQQNIEKA 289 >UniRef50_C3RLZ2 Transcriptional regulator n=3 Tax=Bacteria RepID=C3RLZ2_9MOLU Length = 251 Score = 135 bits (339), Expect = 2e-30, Method: Composition-based stats. Identities = 50/271 (18%), Positives = 94/271 (34%), Gaps = 22/271 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + + YQ L +D + +Y++ LS +LA VS+S++++F+++LG Sbjct: 1 MKLEELVNRNYQQLNDNDLYIWNYIIHHRKECERLSIDELALRCSVSRSTILRFSKRLGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG+ K+ L ++ + + + TL + Sbjct: 61 KGYAEFKVFLRIDNQKNDKN----------------ALTDNIFNHYIE----TLEQYRDY 100 Query: 121 KLHECVTMLRSARRIILTGIG-ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E V + A+ + + G G AQ+ + + + A + Sbjct: 101 HYKEIVQSIYEAKNLYVYGTGVIQDNTAQHLKRSFSMVNKLFLDIDVLADFEAYINLFGS 160 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +D+ +AISY G + L + G V+AI L A + L+ TN Sbjct: 161 NDVFIAISYAGENQRLLDYVYRLKAKGVIVVAIIANNDCTLSHVADYSLHVKTLPVMTNQ 220 Query: 240 ASISACHA-QGMLTDLLFIALIQQDLELAPE 269 +L D + I+ E Sbjct: 221 GRREDLVGNYFILIDFIIANYIEYAKSRGNE 251 >UniRef50_A3K8P8 Sugar isomerase (SIS) n=2 Tax=Rhodobacteraceae RepID=A3K8P8_9RHOB Length = 291 Score = 135 bits (339), Expect = 2e-30, Method: Composition-based stats. Identities = 52/280 (18%), Positives = 110/280 (39%), Gaps = 11/280 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R+ Y + + +++LAD LL +L++ LA++AGVS+++ + ++LGY G Sbjct: 16 IAQRLLSTYDEMPRGERRLADLLLEDVGVLGYLTASDLADQAGVSKATAARLFRRLGYHG 75 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + + + E +++ +P VP + + + + T E++ Sbjct: 76 YRDAQREVRENKSTKAAAPEVPALSGGFLS------PGEYLDAEVKHLVRTFETLPAEQM 129 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL-ATVQASSPDD 181 E V +L A ++ + G G +A L+K+ + + + + +P+D Sbjct: 130 SEAVEILCRAAKLWVVGFGEGYPLALFARALLIKVFPDIRMIPLSGFPVPEEFASINPED 189 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +LA E R G KV+ +T ++ A L ++ Sbjct: 190 AVLAFGVGRRTDEFRNVIGSSRRAGAKVILVTNSIAAGDKRGADLIL----RGRSEGPTV 245 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + A L L + + + A R+ H E++ + Sbjct: 246 FGSMTAPLSLVTYLCARVATRTGDSAQRRLDHIESIHSQW 285 >UniRef50_A8TQ66 Transcriptional regulator n=1 Tax=alpha proteobacterium BAL199 RepID=A8TQ66_9PROT Length = 288 Score = 135 bits (339), Expect = 2e-30, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 101/258 (39%), Gaps = 7/258 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + +++ RY GL+ ++LA L P++ + +LA A V S++++FA++ GY Sbjct: 14 SLRHQVQARYDGLSPHLQRLARLALEDPNSFALETVTRLAQVAEVQPSTLIRFAKEFGYS 73 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDD-----PLRLVGEKLIKENTAAMYATLNV 116 GF ++ L + I+ + + + E+ + + + Sbjct: 74 GFSDMQKVFKLRLIEGAPAYREQIYQHRQRLEATAESDPMAILEEFTDASILCLERLKDT 133 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATV-Q 175 S E L + + M+ +A I + G + +A A+ L ++ + + ++ Sbjct: 134 VSPESLAKAIEMMAAAEHIYVIGQRRAFPIAAYLAYGLARLEHRTQLLDFVGGMVPQQAA 193 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT-IAEE 234 P DLL+A+++ + ++ L IT + L Q + A+ Sbjct: 194 TLRPTDLLIAVAFAEYTPAVVEVVRDVHIRNIPTLTITDVPTSPLAQHGTVYFCVDDADI 253 Query: 235 QATNSASISACHAQGMLT 252 S S AQ ++ Sbjct: 254 HRFRPISGSMSLAQSLII 271 >UniRef50_C5B7U9 Transcriptional regulator, RpiR family protein n=1 Tax=Edwardsiella ictaluri 93-146 RepID=C5B7U9_EDWI9 Length = 225 Score = 134 bits (338), Expect = 3e-30, Method: Composition-based stats. Identities = 98/204 (48%), Positives = 138/204 (67%), Gaps = 6/204 (2%) Query: 2 NGLLRIRQRYQGLAQS-----DKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQ 56 + ++ + L+ + ++KLAD++L P+ LSSQ+LAN G+SQSSVVKFA+ Sbjct: 15 DIYEQLGENKAALSFAGTKRDERKLADFILSSPEQLGKLSSQELANTLGISQSSVVKFAK 74 Query: 57 KLGYKGFPALKLALSEAL-ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLN 115 KLG++GFPALK +S L Q + +H+ I DPL++VGEKL+ E AA+ +TL Sbjct: 75 KLGFRGFPALKQDISAHLLRHQAPANEAALHHGILRHDPLKVVGEKLMAEKIAALQSTLT 134 Query: 116 VNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQ 175 +N EE+L + ML ARRI++TG+GASGLVA++FA KLM+IG A A D H +A Q Sbjct: 135 INHEEQLQRALRMLLGARRIVITGLGASGLVARDFANKLMQIGLAAYAESDTHMQIACAQ 194 Query: 176 ASSPDDLLLAISYTGVRRELNLAA 199 A P DLL+AISY+G R+E+N+AA Sbjct: 195 AMQPQDLLMAISYSGERKEVNIAA 218 >UniRef50_C4XE43 Putative uncharacterized protein n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XE43_MYCFE Length = 297 Score = 134 bits (338), Expect = 3e-30, Method: Composition-based stats. Identities = 46/269 (17%), Positives = 116/269 (43%), Gaps = 8/269 (2%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L +S+K++ D++ + S +LA S + V +F +K G+K + +++ Sbjct: 28 ELTKSEKRIRDFINNFEGNYFNFSQNKLAKNTESSDAGVSRFIRKYGFKDYRTFIASINN 87 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 L ++ ++ +D + + + A+ + + + +++ ++ + Sbjct: 88 KLTEFEKTYPTIWNDNEVDND-----YKFIAASHRYAIDNVYDEDLLKDINKAAEIINKS 142 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVR 192 + I + G G+S ++ N L+KIG A D H ++ + +D+++ S Sbjct: 143 KNIYIHGCGSSQRISMNLVSNLLKIGKPVIAHSDFHIFFPSLAHVTENDVVIVYSNNLQT 202 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLT 252 E + ++ + ++ +T + + L + +T S+ AQ ++T Sbjct: 203 MEAHFVIEQAKKQKAPIIVLTSSQEED--KLIAVKLRYHKIQSSTMLVPSSSKIAQMLIT 260 Query: 253 DLLFIALIQQDLELAPERIRHSEALVKKL 281 DLLF A+++ + E +++ + L+K Sbjct: 261 DLLFEAVLEHNKE-NTSKLKKARILIKNW 288 >UniRef50_A6LTH7 Transcriptional regulator, RpiR family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LTH7_CLOB8 Length = 252 Score = 134 bits (338), Expect = 3e-30, Method: Composition-based stats. Identities = 45/265 (16%), Positives = 108/265 (40%), Gaps = 13/265 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + ++ + + ++ + L+ P + + LA + VS S++ +F +KLGY Sbjct: 1 MDPISLMKSMASTFTKVELEIYNRLMSDPTLIMNSTIVVLAEDLNVSNSAITRFCKKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG+ + S + +D + + + + + + SE+ Sbjct: 61 KGYVEFRYDFS-------------CYFNKEEEDNEDHIVNRTVTTYLSVLNILEKMISED 107 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ + V+ ++ + I + GIG SGL+A+ +++ K N A+ + + + + Sbjct: 108 EIRKLVSKMKKSNNIRVIGIGESGLIAKYLRYRIFKYKRNIEALDNKFEIDESCSLAEEG 167 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L+AI+ +G +E+N E G + IT L+ ++ + Q Sbjct: 168 DMLIAITNSGKSKEINRQIVEAYNNGITTVVITTNDIAVLRSKSHFYFQMPSAGQFYKPG 227 Query: 241 SISACHAQGMLTDLLFIALIQQDLE 265 + + +++ + E Sbjct: 228 AYDNQPIIIIFLEMIVNLFAFFNEE 252 >UniRef50_C7M1X3 Transcriptional regulator, RpiR family n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M1X3_ACIFD Length = 279 Score = 134 bits (338), Expect = 3e-30, Method: Composition-based stats. Identities = 54/283 (19%), Positives = 106/283 (37%), Gaps = 12/283 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + R+R+ L + +++A+ +L + +A A VS +V++F KLG+ Sbjct: 3 SLAERVRRVAPELGPAQRRVAEAVLREYPVVALERLADIAALADVSPPTVLRFVAKLGFS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + A E + + SP + + G + LI + + + Sbjct: 63 SVEEFRSAAREEIGERLASPLERLE--VTGPGDVGSAEADLIDQIRRSFVGLA----PQS 116 Query: 122 LHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNA-AAVRDMHALLATVQASSP 179 L VT+L RR ++ G S +VA++ AW L + + + A + + Sbjct: 117 LDTVVTLLADVRRPVVVSGGRVSDVVARHLAWTLEVLRPSVRHVPPEAGARVNALLDVDA 176 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 ++A + + E + G V+ +T + +S L T + Sbjct: 177 STTVVAFDFVRYQLETARFVTAASQAGATVVLVTDPGLSPAAPGSSVVLTTQVDGPGI-- 234 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 A L + + A++Q+ E A R+ E L + LV Sbjct: 235 --FDALTPALALVEAIIAAVVQRIGEPARRRLARYEELTRALV 275 >UniRef50_C1YQ52 Transcriptional regulator n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YQ52_NOCDA Length = 280 Score = 134 bits (338), Expect = 3e-30, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 112/279 (40%), Gaps = 7/279 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N R+ + L +SD+ L D LL P A ++A AGV ++ + AQ+LGY+ Sbjct: 5 NLQERMSEYRDRLTKSDRVLLDELLSNPAEAPLWRGGEVAQRAGVHPAAATRLAQRLGYQ 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ L+ L EA ++ ++RG V + L+ ++ A S+ + Sbjct: 65 GYLELREDLREAHEARLNGAGDRFRAELRGQ-GQASVLDTLLTTELDSLAAVGKHVSQAQ 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG-FNAAAVRDMHALLATVQASSPD 180 + E +L AR + L G SG++A+ +L + G V + V A S Sbjct: 124 IDEVADLLVGARVVYLFARGNSGVLAELLDSRLRRFGMRPVNLVGPGREVAERVLAMSDS 183 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D++++ ++ R L VG + + +T L + L Q Sbjct: 184 DVVVSFAFRRAPRGLTQLYAHACEVGARSVLVTDTLH-TLDPAPTTVLSAPRGHQE---- 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S+ M+ + + + + Q+ E + + L+ Sbjct: 239 GFSSLSVPMMIANAIVLTVAQRHPETILPALDRLDDLLN 277 >UniRef50_A9BSK7 Transcriptional regulator, RpiR family n=4 Tax=Burkholderiales RepID=A9BSK7_DELAS Length = 314 Score = 134 bits (338), Expect = 3e-30, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 92/279 (32%), Gaps = 6/279 (2%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 R+ Q+ L S+ +A L A S+ LA G S S+VV+ KLGY + Sbjct: 14 QRLAQQGADLTASELTVAQTLGSNYPHALLESATALAAHTGTSASTVVRLFAKLGYASYA 73 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 + + + ++ + + L + + + + AT Sbjct: 74 EAQREARGEVTALLQTAAQRAPVLLGAQRSLSECVDDALLHDQHNIQATREGLDMAAFEA 133 Query: 125 CVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSPDDL 182 L R+ + S V+ A L + A + P D Sbjct: 134 MARKLAQGEGRVFVLAQLNSSPVSAWLALHLNMCRPGVQELDAGAIAPADQLLWIGPSDT 193 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 LLA S + R A G +VLA+T L A H L N++ Sbjct: 194 LLAFSVSQYSRGTFEIAQRFADAGAQVLALTDSPAAPLATVAHHWLQVRT----ANASPF 249 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + A L + L A+ Q + E + +AL K+ Sbjct: 250 HSYTAAFYLCNALVSAVAQLRHKDVSEALARRDALWKEF 288 >UniRef50_B2V3J2 Transcriptional regulator, RpiR family n=2 Tax=Clostridium botulinum E RepID=B2V3J2_CLOBA Length = 258 Score = 134 bits (337), Expect = 4e-30, Method: Composition-based stats. Identities = 53/273 (19%), Positives = 98/273 (35%), Gaps = 20/273 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + + Y L ++DK + Y++ D+ LS + A++ VS +++ +FA+K+ Sbjct: 1 MRIEELMNRYYSDLNENDKFICKYIINNKDSCYKLSIDEFASKCNVSNTTLFRFAKKISL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK L + ++ + T + + + Sbjct: 61 PGFSELKARLRLEVETKNNEKI------------------DFLSTVTESYHKVVEYIKNR 102 Query: 121 KLHECVTMLRSARRIILTGIG-ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + A+RII+ G G A V F + + A ++ Sbjct: 103 DCTNIFEKMYKAKRIIVYGNGYAQARVTSEFKRIFLPTEKTIFNMHGYDMAKAVEALANE 162 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD ++ IS +G +++ A+ + G L+IT N L LY + N Sbjct: 163 DDFVIIISLSGESKDVIKLAEALRLKGISTLSITKMINNTLAGFCEENLYINSIPLPRNY 222 Query: 240 A-SISACHAQGMLTDLLFIALIQQDLELAPERI 271 +L +LLF+ + EL I Sbjct: 223 VLDYEISTPYFILIELLFLKYQKYLSELYSVHI 255 >UniRef50_B9DUC4 RpiR-family regulatory protein n=1 Tax=Streptococcus uberis 0140J RepID=B9DUC4_STRU0 Length = 289 Score = 133 bits (336), Expect = 4e-30, Method: Composition-based stats. Identities = 52/264 (19%), Positives = 113/264 (42%), Gaps = 5/264 (1%) Query: 21 LADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALK-LALSEALASQPE 79 +A+ +L D+ LS + +A + S+SSVV+FAQ LG+KG+ LSE + + Sbjct: 25 IAETILEHLDSIEQLSLEDIARLSFTSKSSVVRFAQSLGFKGWVDFLPALLSERIYADAH 84 Query: 80 SPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTG 139 ++ DD ++ + +K+ ++ T + S+E+L + L A+RI++ G Sbjct: 85 YSNIDHSLPFNQDDSIKAIIQKIATIEKESIQDTADQLSQEELEKASQQLAKAKRIVVFG 144 Query: 140 IGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRR--ELNL 197 + + +A F K++ +G N + T + S DD+ + ISY+G+ + Sbjct: 145 LSPNDYLAHLFKRKMLTLGKNIE-IAHSSEFGLTAASLSQDDIAILISYSGISEKNDTLR 203 Query: 198 AADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-NSASISACHAQGMLTDLLF 256 + + + ++ + L++ ++ E + S + + + L+ Sbjct: 204 HLPLLEKNKVFRIGLSSQNGHYLKEHSNAFFQICTREDKHKKIGNFSTEESILFILNTLY 263 Query: 257 IALIQQDLELAPERIRHSEALVKK 280 + D R + ++ Sbjct: 264 AVYFKADYMKNYIRKLNLSQALEN 287 >UniRef50_A6WYS0 Transcriptional regulator, RpiR family n=4 Tax=Rhizobiales RepID=A6WYS0_OCHA4 Length = 280 Score = 133 bits (336), Expect = 4e-30, Method: Composition-based stats. Identities = 55/284 (19%), Positives = 108/284 (38%), Gaps = 14/284 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L R+R L ++K+L +++ P S+ +LA A VS ++V +F Q+LGY Sbjct: 7 SFLTRVRDVMDELPPAEKRLGEFVCDFPGELASYSASELAALAHVSNATVTRFVQRLGYD 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + + E + + G VG+ + + T E + Sbjct: 67 TYEESRRHAREEKQTGSRLFLSSATDAESGQSLSSHVGQGIAN-----LEKTFLSIRETQ 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL-ATVQASSPD 180 + V + AR+ + G +S A W+++++ N AV L + + SPD Sbjct: 122 IDAVVEAMLGARKTWVFGFRSSQPFAAYLQWQMIQVVDNIVAVPGPGQTLGEYIASISPD 181 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ + +++ + + G K L + A + Sbjct: 182 DMVIVFALRRRIAKMDDILAAIEKRGAK-LLYITDEGAPFRASAQWHFHCQT----LAPG 236 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA---LVKKL 281 + A L LL I++ +R+R EA L+++L Sbjct: 237 PLFNHVAVMALCHLLTTRAIEKAGASGRKRLRDIEASGDLLEEL 280 >UniRef50_A5TS02 RpiR family transcriptional regulator n=3 Tax=Fusobacterium RepID=A5TS02_FUSNP Length = 283 Score = 133 bits (336), Expect = 5e-30, Method: Composition-based stats. Identities = 43/282 (15%), Positives = 112/282 (39%), Gaps = 10/282 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L +++ + +K++A++ L + ++ +A VS +SV++F + LG++ Sbjct: 10 KILEKLKNTKP--TKKEKRIAEFFLDEEQRVFLMNVADIAKAIDVSDTSVIRFIKSLGFR 67 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F K + E + S+ + + I N + + + I + + N S+++ Sbjct: 68 NFTDFKNSGQENIKSRLDKTNDFIKNLDIIKEN--SIEQLYINKINEEVNKIFNSISQKQ 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSPD 180 + + +++ A+ + G ++ ++ F +L + N + D ++ ++ + Sbjct: 126 IKKISSLIIKAKHKYVVGFKSTAGISNFFGVRLGFMLENVSTFNIDDSVVINSIFNIKKE 185 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L+ Y + + A K++ T L + + + + Sbjct: 186 DVLIIFDYPMYSKVAKVLAKMTKENKAKIILFTDSDNAPLAEYSDILYKV----KLNGIS 241 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA-LVKKL 281 ++ + +L + L + Q E A R L++KL Sbjct: 242 VFNSLISTQILVEYLLTYISQFIEEKAKIRFTKIRKYLIEKL 283 >UniRef50_B6GCS3 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCS3_9ACTN Length = 256 Score = 133 bits (335), Expect = 6e-30, Method: Composition-based stats. Identities = 44/263 (16%), Positives = 92/263 (34%), Gaps = 11/263 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + +R+ L +S+ K+A +L P+ S LA G S S++++ QKLGY Sbjct: 2 MNPIDELRRALPTLTKSESKVAGQILKDPNIMLGNSITNLAKVTGASNSAIIRMCQKLGY 61 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF + + + A+ + +L++ + M S + Sbjct: 62 DGFAEFRFSFNRAMMAAESP----------SVGTPDDDSRRLLETYSRYMNMIPQRVSID 111 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + A+R+++ G + A + +L ++G D+ + Sbjct: 112 QFDRLAGAIVGAKRLVIWGCNRTFQSAMQLSHRLTRLGIFNKPTNDVIVMSDDAAILEKG 171 Query: 181 DLLLAISYTGV-RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+ + S G + D M G V +T + + A + Sbjct: 172 DVCIVFSMQGRGNARYSEDMDLMRERGVDVHLVTMDRHSCMLSHADTAYVLPWISHDDSI 231 Query: 240 ASISACHAQGMLTDLLFIALIQQ 262 M ++L + + ++ Sbjct: 232 NFFEDQIIVYMFIEMLLLNVSKR 254 >UniRef50_B9J832 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9J832_AGRRK Length = 340 Score = 133 bits (335), Expect = 6e-30, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 109/277 (39%), Gaps = 5/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N RI +GLA +++++A + + Q S+ Q+A AG S ++VV+ A+ LG++ Sbjct: 51 NFDARILAAIEGLAPAEQRMARFFIDQKQAVLLNSAAQIAELAGASDATVVRTARALGFE 110 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 AL+ AL L + D + +I + A+ + Sbjct: 111 SLSALRAALLSELTGTSTPGNRLERTLAETDGDAAGILHHVIGIHETALDVLKRPETAAS 170 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA-SSPD 180 + +L +A + + GIG SG +A + + +IG + LA Sbjct: 171 FTRAIDILAAANQRHVFGIGPSGAMADYASLQFNRIGLPTYPLSASGIALADRLLWLGRG 230 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D +L ++Y + RE+ + ++ R G V+ I+ + + + L + Sbjct: 231 DAVLMMAYAPLYREVEVVLEQASRHGVPVILISDNLGPLVADKVAEILPVPRG----KAD 286 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 ++ +L + + L + A + + H L Sbjct: 287 HLAMHAGTMVLIEATIVGLAAHRRQAAFDSLDHLSTL 323 >UniRef50_C9AB15 Phosphosugar isomerase transcriptional regulator n=3 Tax=Enterococcus casseliflavus RepID=C9AB15_ENTCA Length = 257 Score = 133 bits (335), Expect = 7e-30, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 89/262 (33%), Gaps = 19/262 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I+Q L++ D+ + +Y+ DT + +L+ + VS+SS+++ +KLG+ Sbjct: 1 MKLQYLIQQHQSELSELDRGILNYIFSNGDTVLSMGIVELSEQVHVSKSSILRLTKKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ K L + + ++ ++ATLN Sbjct: 61 SGYSEFKYFLRHQQEQTTTISQQ----------------KTIFEKQQEDIFATLNYVKTV 104 Query: 121 KLHECVTMLRSARRIILTGIGASGLVA-QNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 L + ++ I G S A + F+ ++ + + + + + Sbjct: 105 DLAALNCLFDRSKTIYCYPTGFSQKKALEEFSKMMLSMEKRVIVLPNKTEFDMVMPMITA 164 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +D ++ S +G + VL ++ N + ++ L + Sbjct: 165 EDCVIIASLSGETENVKENLTTFAIRQIPVLTLSAPGDNYFARHSTFHLTYYCDFFQIGR 224 Query: 240 ASISAC--HAQGMLTDLLFIAL 259 I + L D L + Sbjct: 225 KKIPSQSLIGLSCLIDYLIRSY 246 >UniRef50_C9M9T3 Putative SIS domain protein n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M9T3_9BACT Length = 292 Score = 133 bits (335), Expect = 7e-30, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 89/266 (33%), Gaps = 12/266 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N IR RY L + + AD +L P++ ++ + LA AGVS+ +V+ LG++ Sbjct: 4 NVTDVIRSRYGKLTKKQRLTADIMLADPESMAFMTLRDLAAAAGVSEMTVLHTCAALGFE 63 Query: 62 GFPALKLALSEALAS------QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLN 115 + LK L Q + + + ++ E Sbjct: 64 NYNQLKYEFRRYLTLKAKVDIQEQCGYPNMEVPSYELSEPAKLMAQICDEEAQVSRGFFE 123 Query: 116 VNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR--DMHALLAT 173 L M+ +R ++ G S VA + +L +G A + +L A Sbjct: 124 SVGPVSLLHAAEMIVESRVTLMAARGVSMQVADFLSMRLAIMGLPAVVMNTEQNDSLHAA 183 Query: 174 VQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE 233 + L+AIS + R G +L +T + Q L Sbjct: 184 LPLLGKGVALIAISMPDYYIMTTKVCEFARRQGASILGLTDHLKAPIAQYCDLLLTAPTA 243 Query: 234 EQATNSASISACHAQGMLTDLLFIAL 259 + I+ L +LL A+ Sbjct: 244 TRLF----INTIGPMLSLANLLSAAV 265 >UniRef50_Q98JM0 Mlr1883 protein n=2 Tax=Mesorhizobium RepID=Q98JM0_RHILO Length = 297 Score = 133 bits (334), Expect = 8e-30, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 89/253 (35%), Gaps = 6/253 (2%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 + +++A ++ P + Q+A +AGV S++V+FAQ GY GF + E Sbjct: 49 HFPKRLRQVAIFMWQHPSDVALGTIAQVAAQAGVQPSTLVRFAQIFGYSGFSDFQGLFKE 108 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 + ++ + + ++ + A++ E + VT+L +A Sbjct: 109 HVKGSWPEGRGEPRTEVEPNAAMH-FLHGMVGASQASLGRIETGFDVESFEKMVTLLAAA 167 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIG-FNAAAVRDMHALLATVQASSPDDLLLAISYTGV 191 I + G + V + L + G N + L V D +LA+S++ Sbjct: 168 ELIYVIGSKRAFPVTAYLSLTLSQQGVRNVLVDNVGSSALDQVGCIGSRDAVLAVSFSPY 227 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGML 251 +++ IT T + L + L ++ A + A + Sbjct: 228 NSITPDLVAVAHERKARIVTITDSTFSPLIALSDSWLEV----VESDFAGFRSLAASLAV 283 Query: 252 TDLLFIALIQQDL 264 L + + Sbjct: 284 GMALVQGVAAKRG 296 >UniRef50_C6BI14 Transcriptional regulator, RpiR family n=6 Tax=Ralstonia RepID=C6BI14_RALP1 Length = 302 Score = 133 bits (334), Expect = 9e-30, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 93/279 (33%), Gaps = 5/279 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + +R R L+ ++ A L LS + LA + ++ + A+ LG+ Sbjct: 6 LMQTLRDRAADLSPQLQRAAMLLETHQRDIALLSMRDLARRCDLPPATFSRLARALGFDD 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F AL+ L Q + + D E++ + + + + + L Sbjct: 66 FAALRDVCVNHLRQQADGFAGRASALQGEDAAGASEAERIGMAIGSHVQSAFSPANMAAL 125 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATV-QASSPDD 181 L ARR+ L G + + F + LA + D Sbjct: 126 DIVAAALCRARRVYLLGARSCLALTHAFGYAAQLFDDKVTLCAGSGNTLADPLRFCGEGD 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++A+++ RE+ A G +++ +T + A L + Sbjct: 186 IVVAVTFDPYTREVIEAMQYAHARGARLVYVTDSAIAPGAELAWQHLVAPVAIPSF---- 241 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + A L D L + + A + S+A +K+ Sbjct: 242 FHSLAAPMALLDALLMTWFRHAGPAALTHLADSDAQLKQ 280 >UniRef50_C3RJQ3 Predicted protein n=2 Tax=Bacteria RepID=C3RJQ3_9MOLU Length = 258 Score = 133 bits (334), Expect = 9e-30, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 102/264 (38%), Gaps = 7/264 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 I L + ++ +++YL +PD ++++LA VS ++++F QKLG+KG Sbjct: 2 IRELIDSI--KLTKKEQVISEYLEQEPDCVLQYNAKELAALIKVSAPTLIRFVQKLGFKG 59 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + ++ ++ + +I +R V E L T + E Sbjct: 60 YSDFQVTYTQE----KTMYDQMKNIRIDSKSSIRDVIETLPAIYDHVFKETRKLTRFESF 115 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + A++I + Q+ KL IG A ++ D L Sbjct: 116 VRTINYMLQAKQIDFYANDNNYSEVQSACLKLNTIGIKAQCFNTLNTA-YIDNIDPRDIL 174 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 +S++G + + AA E+ + +V+AITG L+ + LY + + Sbjct: 175 AFVVSHSGKNQTMVDAAYELRKKRIRVIAITGKIDPTLELVCNEALYIDSSSHHLPHHIM 234 Query: 243 SACHAQGMLTDLLFIALIQQDLEL 266 + + D+L +L + + Sbjct: 235 LYGLSIHYILDILVTSLYYKKYKE 258 >UniRef50_A8AMT2 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=A8AMT2_CITK8 Length = 319 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 49/273 (17%), Positives = 106/273 (38%), Gaps = 9/273 (3%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 + Q L +S+ +L DY+ + L+ A VS++++ +F K+G+ G+ A Sbjct: 37 LTQNIGDLTESECRLNDYINKHFSELPYHGIVDLSQNAAVSKATIGRFLNKVGFTGYAAF 96 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDP--LRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 + AL L+ + +++ R + + E + T+ + S + L++ Sbjct: 97 RRALDTTLSKNKIAAPFEKNSRQRPKNTTKTEQIVETFNNKVTSLFNSFKQTISIDSLNK 156 Query: 125 CVTMLRSA-RRIILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASSPDDL 182 + ++ ++ R I + G +S +A +F L N + D+ L + PDD+ Sbjct: 157 FIELVLNSQRHIYVVGPSSSHAMALHFCTLLKYFRSNITLLPTDISELPKCLINIEPDDV 216 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L+ SY R A + V+ IT N + ++ ++ Sbjct: 217 LIVFSYYRFNRVALNIAKWFRKKNATVVLITNSDANPYGKFCDLQFVLPSDVESI----F 272 Query: 243 SACHAQGMLTDLLF-IALIQQDLELAPERIRHS 274 + +L+ +A + D E ++ Sbjct: 273 QSRILGFFFIELILHLAYEKSDNEGNFAQLEEL 305 >UniRef50_C2CHV1 RpiR family transcriptional regulator n=1 Tax=Anaerococcus tetradius ATCC 35098 RepID=C2CHV1_9FIRM Length = 268 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 51/279 (18%), Positives = 106/279 (37%), Gaps = 20/279 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + IR+ Y L ++D ++ Y++ A LS +LA++ +S SS++ F +KLG Sbjct: 1 MILMNLIRENYSKLNKNDLRIYSYIVQNKSEANELSINELADKLDLSTSSIMTFTKKLGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +G+ L+ + + + I+ + T+ + S Sbjct: 61 EGYSELRYLIKWSEEEIQ----------------GSTFNDNEIEYTKNDINLTMTMMSSL 104 Query: 121 KLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 L L +A RI + G G VA+ + +G + V+ Sbjct: 105 NLDGLFESLNAAERIFVIGNGYVQHNVAEELKRNFLNVGKIVIIIDQASDYEQYVEMIGE 164 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+L IS+ G + L D + + +IT + N + R+ + + + E + Sbjct: 165 GDVLFVISFRGENKSLIDFLDRL-DKNVVIASITKLSNNTISHRSDYNIAFVTHEVFDFN 223 Query: 240 ASIS-ACHAQGM-LTDLLFIALIQQDLELAPERIRHSEA 276 + + +Q + D + + + A + R ++ Sbjct: 224 QRMKISPVSQFYVVIDFIILKYLSFIERKARSKKREAQR 262 >UniRef50_Q1IJ92 Transcriptional regulator, RpiR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJ92_ACIBL Length = 291 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 42/268 (15%), Positives = 104/268 (38%), Gaps = 6/268 (2%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 +R + L++ +L + +P LS + +A + G ++V++ + LG++ + K Sbjct: 19 ERMERLSKKRSELIRPVQERPRDYVLLSIRDVAAKLGTDPATVLRTVRGLGFESYREFKA 78 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L + L+ + + + + L G + + ++ + A N ++ Sbjct: 79 YLHQ-LSIASATSLDGMQAVSKPNSSLLSQGARALDQDLQNLQALRNTLDMNRIVAIARR 137 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + +AR+I++ G + +A+ + L +GF A + V++ DL+ AIS+ Sbjct: 138 VYAARKILVLGGDLAASLAEYLEYNLTLLGFTVVAGITPGKTINAVRSFDRHDLVFAISF 197 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 R+ + G + IT + + + + CL E ++ A Sbjct: 198 RRGLRQTVEGMKQARANGAYCVGITDSFVSPICRFSDECLLASIESHLG-----TSYAAP 252 Query: 249 GMLTDLLFIALIQQDLELAPERIRHSEA 276 L +++ + ++ + Sbjct: 253 MSLFNVMLTICAHYREARTMKTLKKLDQ 280 >UniRef50_D1AJC9 Transcriptional regulator, RpiR family n=4 Tax=Bacteria RepID=D1AJC9_SEBTE Length = 248 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 42/260 (16%), Positives = 102/260 (39%), Gaps = 17/260 (6%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + + L S++++ Y+ + +S +A E S ++V + +K G G Sbjct: 2 IIQLNDKIKSKLTSSEEQVIKYINENDNKLVDMSIVDIAEETFTSPATVSRAIKKCGVNG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F L+ LS+ S ++ ++ TL S ++ Sbjct: 62 FMELRYNLSKRKEEINSSKD----------------INEIFSKSLIETRQTLENISVNQI 105 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 E + +++ +++II+ G S LVA F+ KL + FN + D + + + ++ D L Sbjct: 106 LEIIELIQKSKKIIVIARGLSELVATEFSLKLELMDFNVFNISDPNIMKKFSREANKDHL 165 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY-TIAEEQATNSAS 241 +A + G +++ V+A + + L++ + H + + Sbjct: 166 YIAFTLKGEDQDILTTIKNAHLRDANVVACSCGSNKELRKYSDHIILGYKHSNISIKKFE 225 Query: 242 ISACHAQGMLTDLLFIALIQ 261 +++ +++ ++ L+ Sbjct: 226 VTSRLPLFVISRVILDYLVM 245 >UniRef50_C5NW06 Transcriptional regulator, RpiR family n=2 Tax=Firmicutes RepID=C5NW06_9BACL Length = 255 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 108/259 (41%), Gaps = 15/259 (5%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +++ Y L+ S+++ DYL+ Q D + +++ E VS S+V++ +KLGY Sbjct: 2 FFENLKENYDRLSISEQQAIDYLMKQ-DNIELTTLKEIKQEILVSSSTVIRACKKLGYNT 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK L + + + + L ++ + T+++ +++ Sbjct: 61 FIDLKYDLKMSKELAKNNNATSSNFI------------TLKEQLSVEFSRTMSILNQDDF 108 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + +ARRI G G+S +V +F KL I + + +++ + DD+ Sbjct: 109 DIFADKIINARRIFCLGSGSSYMVMSDFNRKLKLINLWSNDYFEHYSIKRIPDICTKDDV 168 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 +L S G +N + G VL+IT + L + + H + + N I Sbjct: 169 ILVFSLGGNTDVINDCVLAAKQNGATVLSITSLANSPLAKMSDHLIKVY--DAPKNRKKI 226 Query: 243 SACHAQGMLTDLLFIALIQ 261 + ++ +LF ++ Sbjct: 227 RSRLMLNVVGIILFETIVN 245 >UniRef50_Q1AYI2 Transcriptional regulator, RpiR family n=17 Tax=Actinobacteria (class) RepID=Q1AYI2_RUBXD Length = 295 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 53/284 (18%), Positives = 101/284 (35%), Gaps = 17/284 (5%) Query: 3 GLLRIRQRYQ--GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 +++ + L+ + ++LA Y++ PD A LSS +LA GVSQ SV + A +GY Sbjct: 18 VRALLQRLFDGSRLSPTQRRLARYVMDHPDEALFLSSVELARRVGVSQPSVTRLAVAMGY 77 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ L+ L + + EN A+ +L Sbjct: 78 GGYGELQRELRAVALEGGGGGAGSEAPNKFQGAVRAEI------ENLRALERSLE--DTG 129 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLAT---VQAS 177 + E L ++ + + G+ S +A F + KI + + + + + Sbjct: 130 AVEELGRELAASEPLCVLGLRVSAPLAGYFGYFAKKIHPDVRVLTEGGSAAFDALAQARA 189 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 + +L RE A +G +V + +++ + L + Sbjct: 190 AGGAWVLCFLLPRHPRETLQAMSYARSLGLRVATVADRETGWIRELSDAVLPAEVGTRLV 249 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + A +L +L AL + A ER+ E +L Sbjct: 250 ----FDSQAAAMVLAGVLLEALSDAAPKRAQERLEEFEQRAARL 289 >UniRef50_Q4A725 Transcriptional regulator n=1 Tax=Mycoplasma synoviae 53 RepID=Q4A725_MYCS5 Length = 282 Score = 132 bits (332), Expect = 1e-29, Method: Composition-based stats. Identities = 49/275 (17%), Positives = 109/275 (39%), Gaps = 9/275 (3%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I L S+ K+ +++ + S + LA A VS ++V +F +K G+K F Sbjct: 13 ILLNNSKLINSENKVLEFINGFQGEVFNYSIEDLAKLANVSTATVFRFVRKYGFKNFKEA 72 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 + +++ L E + ++ N + ++ + + Sbjct: 73 IIFINKNLQKLNEKYPLSTSQDNN--------ISTIVAGNKYVLDNLYTNELQKIIEKAA 124 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 ++ +++RI++ G G+S +A+ L K+ N A D H L + ++ +D+ + Sbjct: 125 QIIYNSKRILIHGAGSSKRMAETLVSNLYKVSLNVIAHDDFHLFLPVLGNATTEDVCVLF 184 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S E + +++ IT + L + + + +S+ Sbjct: 185 SDNLNSPEAAFTIKQCREKKVQIILITSKKKSNLITKNDVVILYEKITSKHLNIPLSSKW 244 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +Q ++ DLLF L+ D E++ +S ++ K Sbjct: 245 SQLLIADLLFENLLILD-SNLREKLNNSIQIINKW 278 >UniRef50_A4JPM3 Transcriptional regulator, RpiR family n=11 Tax=Burkholderia cepacia complex RepID=A4JPM3_BURVG Length = 292 Score = 132 bits (332), Expect = 1e-29, Method: Composition-based stats. Identities = 47/278 (16%), Positives = 106/278 (38%), Gaps = 7/278 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + + S++K+A LL + + A +A VS +V +F ++G+ Sbjct: 4 SIRALLLSQMDSFTPSEQKVAHALLDRYPSLGLGPIASFAKQAEVSDPTVFRFVVRIGFP 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + + + AL + + + SP + +R + + + ++ T++ Sbjct: 64 NYSSFQQALHDEIDAAMNSPLARMDA-FHSKTGMRDSHAAIFERLSQSLATTIDGLDAAA 122 Query: 122 LHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASSP 179 V +L + + G G + +A F++ L + V +++ ++ P Sbjct: 123 FDAAVALLAAPEVRVFCGGGRYTAPLASLFSFTLAYARPHVHYVEPNVNVASVSLADMEP 182 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+L+ + +++ A +G +VL IT + + A L + Sbjct: 183 GDVLVIFDFRRYQKDSVRFAQAAHALGVRVLLITDEWRSPISAFAEIVLRILGRP----F 238 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 A + L + L I + + ELA +R+ E L Sbjct: 239 AMLQTNVPALALAEALVIGVTNRLPELARQRMEKIERL 276 >UniRef50_Q6A765 Transcriptional regulator, RpiR family n=3 Tax=Propionibacterium acnes RepID=Q6A765_PROAC Length = 296 Score = 132 bits (332), Expect = 1e-29, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 100/281 (35%), Gaps = 7/281 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + R+ + Q + +D +A Y + +++ G S +SV +F +KLGY Sbjct: 16 SLYTRLGE-LQAMTPTDAIIAQYCEDSFPHVALENLDEISAATGTSTASVTRFVRKLGYA 74 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F +L E +A D + ++ ++ LN E Sbjct: 75 SFRDFSRSLREEVA-ANFDLPSDRTTNDPMTDEPGAMWRSKMEAARRSIDIGLNSLDGET 133 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMK-IGFNAAAVRDMHALLATVQASSPD 180 V +LR R + A+G ++ L++ + + + + + Sbjct: 134 FDRVVELLRDDSRPLCLVAAATGHALLDYFRLLVRYYRRDVILLDSTDRMAHQLIDLPDN 193 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +LLA + R + + + +T + +++ A H L +E +S Sbjct: 194 AILLASVFDRHSRMVESVLRLFHQRNMTTVLLTNRSSTPMRRYADHVLLVSSE----SST 249 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + +L + L AL D E+ R+ + L +L Sbjct: 250 AFRSRACYLILLESLVAALAPADHEVERFRVETMQGLFDEL 290 >UniRef50_B0MFI6 Putative uncharacterized protein n=2 Tax=Anaerostipes caccae DSM 14662 RepID=B0MFI6_9FIRM Length = 245 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 101/258 (39%), Gaps = 17/258 (6%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + +++ L ++K + Y+ + S ++A E+ S ++V + +K G+ G Sbjct: 2 IIRLEEDQWKTLTDAEKSVITYINNNEELIPEKSISEMAEESYTSPATVSRTIRKSGFDG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 L+ +S + ++ + +++ T+ + Sbjct: 62 ISELRYRISAR----------------NEFNQEAMIVNAIFQKSMLECQKTIENLKVPTI 105 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 E V ++ A++I L GA+ LVA+ F +L +G+N +RD + + DDL Sbjct: 106 LEVVKRIKRAKKIYLLARGATVLVAEEFEMQLQLLGYNVWIMRDSEHMKRSNLIFKEDDL 165 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE-EQATNSAS 241 ++ + EL +AA V++ T + L Q + + + + A Sbjct: 166 VIIFTVKNSTPELGMAAKFAKENKAYVVSCTCLPRSELNQYSDVYVVGYTKYDYAIKEFL 225 Query: 242 ISACHAQGMLTDLLFIAL 259 +++ +++ + L Sbjct: 226 VTSRLPLQIISRTIIEYL 243 >UniRef50_C9A974 Transcription regulator n=4 Tax=Enterococcus RepID=C9A974_ENTCA Length = 252 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 104/262 (39%), Gaps = 20/262 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M ++ L+ ++++ +++ + ++ + +A++A VS +SV +F QK+G+ Sbjct: 1 MALFEQL--NLNKLSAVEQEIYRFIVNHLEKIPYMRVRDIADDAHVSSTSVFRFIQKVGF 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + FP + + L L + ++E Sbjct: 59 QSFPEFRFYIKNHLEKAHFDAHPEHLGLEARIKGLN--------------MQIFHPDAEY 104 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ + +R A I+ G+GASG +AQ A KL +G+ + ++ ++ + + Sbjct: 105 QIRKLAEAMRDADLILFMGMGASGAIAQYVARKLASLGYFSISIDELTYPIKSFLRKDQK 164 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKV--LAITGFTPNALQQRASHCLYTIA-EEQAT 237 ++L+ +S +G +EL + V IT + L + + + EE+ Sbjct: 165 NVLVFLSVSGETKELIEVITGL-DNQAIVQKYCITPNRESTLARLCDYSIEYAIKEERKD 223 Query: 238 NSASISACHAQGMLTDLLFIAL 259 +++ + + L L Sbjct: 224 IFLDLTSQLPSVAILETLIGYL 245 >UniRef50_C1IAA4 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IAA4_9CLOT Length = 245 Score = 132 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 51/261 (19%), Positives = 108/261 (41%), Gaps = 17/261 (6%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ R + ++KK+ +Y+L + ++ + +AN+ +S +++++ +KLGY Sbjct: 1 MSFYERFSNENIHINNTEKKIIEYILERANSFSKIKLTDIANDLFLSSNTIIRLCKKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK + + + H I ++ TL++N +E Sbjct: 61 SGFSELKYDIINNNYEKVSDSNEHSHITI-----------------QNSILQTLSLNKKE 103 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 EC T+++ + ++I+ +G S A +FA KL D A Sbjct: 104 TFKECATLIKDSNKVIIFSLGLSQYPALSFAKKLQYFNKICLVPEDRDATTLFANNLKDG 163 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL + +S +G + + + +++ITGF+ N + + LY ++ + Sbjct: 164 DLAIIVSSSGNTDIMRKISSIITTKNVSIISITGFSQNIVSHFSDISLYAYLKDYNIDGH 223 Query: 241 SISACHAQGMLTDLLFIALIQ 261 +++ ++ DLLF Sbjct: 224 DLTSRIGFNIIFDLLFEEYSN 244 >UniRef50_A1VUM9 Transcriptional regulator, RpiR family n=4 Tax=Comamonadaceae RepID=A1VUM9_POLNA Length = 303 Score = 132 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 53/276 (19%), Positives = 119/276 (43%), Gaps = 8/276 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R+ + Y L+ +D++LAD ++ + S+ +LA AG S++S +F Q+LGY G Sbjct: 24 LDARLLKVYDQLSATDRRLADVVIARKKDLLAYSATELAGLAGASKASAARFFQRLGYAG 83 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F + + + SQ + R + + ++ + A + + L+ +++ L Sbjct: 84 FSDFRQQVRAQV-SQQSPLARIGRTPARPSESAS--LQAHVQNDVARLGSLLDGLTQDVL 140 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSPDD 181 + + +L ARR+ + G + A + L ++ + + ++ + + D Sbjct: 141 EQALELLVRARRVWIVGYRNGCMTAFYASALLSQVRHDVNLLNELSGREAEILADLNDKD 200 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +LLA+ + L G +VL +T +AL +A+ L+ ++ + Sbjct: 201 VLLAVDFRRRTSRLPRIVAAARSTGARVLLLTDTPLSALASQAAAILHCPSQTEQV---- 256 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + + L + L ++ + + A R+ E+L Sbjct: 257 FDSYVSAVSLMNYLATSMAARTRKQARARMSRIESL 292 >UniRef50_Q2BDH7 RpiR-family transcriptional regulator n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BDH7_9BACI Length = 266 Score = 132 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 91/252 (36%), Gaps = 9/252 (3%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L+QS+ + +L+ + + LS + A+E VS +S+++ +KLG+ G+ L Sbjct: 16 DLSQSEMDILSFLIKRKFEDKPLSIRNAADELYVSTTSIMRLCKKLGFSGYSEFIFNLGL 75 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 + + +S + + E+ +E ++ E + + + + Sbjct: 76 KIKNAHDSDHGSVVE-------IHSPLEESRQEFVRNFNSSFEALDENSIQAFLAEIEKS 128 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVR 192 +I G G S L + + KL G+ + + D+++ S +G Sbjct: 129 SKIYFYGAGFSTLFSNYLSKKLELFGYYVSNASTSDSRAIFFNNIQKYDVMIVFSRSGET 188 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT--IAEEQATNSASISACHAQGM 250 ++ G + + TG + + A E S M Sbjct: 189 GKVIEKMKIAKDKGIRTVLFTGNSRSTTANLADIVFSVLDPTIESQQEFQVTSYESNMFM 248 Query: 251 LTDLLFIALIQQ 262 + D++ I I++ Sbjct: 249 MIDIILILAIKK 260 >UniRef50_B0NEG5 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NEG5_EUBSP Length = 287 Score = 132 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 53/284 (18%), Positives = 114/284 (40%), Gaps = 17/284 (5%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + RI Y+ L ++ K++A YL + + A +S++ L+ + VS+++V + A LGY Sbjct: 15 SLCERIDLVYEKLTEAQKQIAIYLKKKWEQACLMSAKSLSEQVDVSEATVHRLAASLGYD 74 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F +K + E L + R ++ ++ + T +N ++K Sbjct: 75 SFTDMKEKMKEEL----LMNRAVTNMSFRNRGISENWLDECLQTEMVNLVNTYQLNLKDK 130 Query: 122 LHECVTMLRSARRIILTGI----GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 + + MLR++RRI + G G S + + L G + + + Sbjct: 131 ISQGAEMLRNSRRIYVIGDKQGLGTSSYLGFVLNYLL---GNTVHL--TLADVYEQIGFM 185 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 +D+L+ I + A + ++LA T + Q+A LY Sbjct: 186 GSEDVLIVIGFQRYCPRTQKAVELAADRNVRILAFTDCNLSPFAQKAEISLYA----TMD 241 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++ + + A + L ++ +D E + + +E + ++ Sbjct: 242 STYFLDSYTAVVSIAQALIARIVMKDEERIRKNVEATEYVYRRF 285 >UniRef50_C4V4P0 RpiR family transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V4P0_9FIRM Length = 255 Score = 132 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 56/262 (21%), Positives = 92/262 (35%), Gaps = 23/262 (8%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RI + + L+++D+ + Y+ A S +LA VS +SVV+FAQKLG+ G Sbjct: 2 LTERINEHLRELSETDRSIWRYIDANRTAASRASIHELARACAVSSASVVRFAQKLGFDG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F +K + A P D T + Sbjct: 62 FGEMKAVMRMEAAPAAVPPQDVRSALSGFYD------------------QTWRALMQRDY 103 Query: 123 HECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 ++R A R+ G V Q + + QA+ PDD Sbjct: 104 TRASRLIRGAHRVFGYASGYVQTNVMQELKRLFFYDNIFIYEIAGREEFYSVYQAAGPDD 163 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L + IS +G A+++ G VL+IT N L R++ LY + E Sbjct: 164 LFIFISLSGESARTVEFAEQLNLKGIPVLSITEMRRNTLASRSTENLYVMPAEFNLPENE 223 Query: 242 ----ISACHAQGMLTDLLFIAL 259 + A +L ++ ++ Sbjct: 224 ARLQFKSMLAYFLLLEIWYVHY 245 >UniRef50_C9A4Z8 Transcription regulator n=4 Tax=Enterococcus RepID=C9A4Z8_ENTCA Length = 247 Score = 132 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 104/261 (39%), Gaps = 26/261 (9%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ +I + L+++D+ + Y+ Q D ++ +++A E+ S SSV++F +KLGY Sbjct: 1 MSFFGKID--FNELSETDRAIYHYMSSQSDKIPYMRVREIALESHTSASSVMRFIRKLGY 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + F + VP + + + ++ + + Sbjct: 59 ESFTEFRTQFK-----------VPELDAVSFYSSMNVLNAEHFPRDIE-----------G 96 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 K+ + II GIGASG + + A + IGFN+ A+ D + + D Sbjct: 97 KIRRIAERMLECDNIIFYGIGASGSMCEYAARRFATIGFNSYALVDNTYPIFAKLKHTSD 156 Query: 181 DLLLAISYTGVRRELNLAADEMLRV-GGKVLAITGFTPNALQQRASHCLYTIAEEQATN- 238 ++++ +S TG E+ + +AIT + L + + + L + + N Sbjct: 157 NMIVVLSITGTTTEIIEVVNGFRNNPDFTTVAITSDANSTLGRMSDYVLDYSVDVKRINK 216 Query: 239 SASISACHAQGMLTDLLFIAL 259 ++ L + L + Sbjct: 217 YEDLTTQIPCLFLVEALSETV 237 >UniRef50_C6CS19 Transcriptional regulator, RpiR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CS19_PAESJ Length = 277 Score = 131 bits (330), Expect = 2e-29, Method: Composition-based stats. Identities = 43/274 (15%), Positives = 101/274 (36%), Gaps = 12/274 (4%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L + +++ADY+ D + + +A GVS S+V +F ++G K K + + Sbjct: 8 KLTRGHQRIADYISKNMDDVPFMIEEDIAAACGVSVSTVSRFWAEVGSKNLKEFKQRVKD 67 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 + P + + + ++ + + + + ML A Sbjct: 68 EVLLSP---ARKLQSAFDKVGGDSGAAANVL-SVADYLQQSADRIDQAAFDAAAAMLAGA 123 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSPDDLLLAISYTGV 191 + + G G++ + ++L + G + + H L ++ P+D+++ + Sbjct: 124 GTVHIYGPGSAECLTALMDFRLSRFGADVRRLDRGGHELFESMVPIRPEDVIVIFGFVSE 183 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGML 251 E+ + D G + L IT + + +A L+T + A + Sbjct: 184 SPEMAVLLDFARERGCRTLLITDLAVSPMLAKADISLFTARG----QLWEFHSMVAPIAV 239 Query: 252 TDLLFIALIQQDLELAP---ERIRHSEALVKKLV 282 + L +A+ ++ + A E + KL+ Sbjct: 240 IEALIVAVGKEWEQAALAGSEELHRLRRKYAKLL 273 >UniRef50_C9XQF1 Phosphosugar-binding transcriptional regulator n=5 Tax=Clostridiales RepID=C9XQF1_CLODC Length = 250 Score = 131 bits (330), Expect = 2e-29, Method: Composition-based stats. Identities = 43/266 (16%), Positives = 103/266 (38%), Gaps = 18/266 (6%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + + + L +++ ++ ++ LS ++A+E S ++V + +K G G Sbjct: 2 IIELNKSNSENLTKTELEIIKFINENESILPELSIVEIAHETYSSPATVSRAIRKCGLNG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F L+ L +D ++ +G+ + K A + S L Sbjct: 62 FNELRYRL----------------TVKDENDDIQNMGDIINKSFIEA-QRVIEQISLTTL 104 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + + +I + G + VA+ F+ KL + FN + D + + ++ D+L Sbjct: 105 INIIKTINKSSKIYILARGLTEYVAKEFSLKLQLLDFNVVFINDPNIMKIKSKSIKKDEL 164 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ-ATNSAS 241 ++ S G EL +A VG KV+ L + + + E + + Sbjct: 165 IIIFSLNGNTIELVESAQNANLVGAKVITCCCSESAKLIKYSDLYIVGYKHEHISISEYE 224 Query: 242 ISACHAQGMLTDLLFIALIQQDLELA 267 +S+ +++ ++ +++ + Sbjct: 225 VSSRLPLYIISRIIIDYMVRYNNSEN 250 >UniRef50_A5EGL2 Transcriptional regulator, RpiR family n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EGL2_BRASB Length = 303 Score = 131 bits (330), Expect = 2e-29, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 101/277 (36%), Gaps = 7/277 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RIR LA ++ +A +L T + QLA A VS +V++ KLG+ G Sbjct: 11 VAERIRVVRNHLAPAELAVAKVILENYPTGGLVPIVQLATAAEVSAPTVLRLVSKLGFDG 70 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + A L + + V + + + + +T + ++L Sbjct: 71 YGAFHETLRAEIHQRI-FSPVDAYPDSKRQPAAETPAARAQAAYVDCIRSTFSHLDVKEL 129 Query: 123 HECVTMLRS-ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASSPD 180 V+ L AR +++ G S ++A A L + + + D ++ + P Sbjct: 130 KAAVSALADVARPVVVMGGRISAILATQLATYLSMLRKDVTHIASDGTERISALVDLKPR 189 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +++ + ++ E + ++ +T + L A+ L + + Sbjct: 190 TVVVLFDFRHYQQSTLDWGLEAAKRRAHLILVTDQFLSPLASHATTLLTSSTK----GLE 245 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + +LT+LL + + A +R+ AL Sbjct: 246 PFDSMAGGFVLTELLISEVARALGSPARKRLGEFLAL 282 >UniRef50_UPI0001C31BBF transcriptional regulator, RpiR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31BBF Length = 295 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 52/277 (18%), Positives = 101/277 (36%), Gaps = 8/277 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 I R+ ++S K +A Y++ D A ++++LA A S S+VV+F+Q LG++G Sbjct: 21 LSDYITARFDEFSRSQKDVAQYIVDHLDEAAFQTAEELARRASTSSSTVVRFSQALGFEG 80 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRG---DDPLRLVGEKLIKENTAAMYATLNVNSE 119 FP L+ A + +P + N + + E + + + T S Sbjct: 81 FPELQQAARDEYRRRPAGGADAAPNAVAAAPLFSLDQTEYETALATDHVNVEETARKLSR 140 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQASS 178 + + + +A ++++ G A L + A V L + Sbjct: 141 SDVEAAIEAIATADKVLIAGTDQMAFFASYLRHLLSLLDIRAEVVASPSQEALGRLSRID 200 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 L++ +S + +AIT T + + + A LY + Sbjct: 201 ESTLVIGLSAGRPHPLIARTMKLARHRRSPTIAITDATLSEVARLARTRLYYSSNSP--- 257 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 A + + A L L + +D + RI+ Sbjct: 258 -AYVRSHTALLSLIQALAYGVYSRDAQQYDMRIKAYR 293 >UniRef50_C3RLW4 Predicted protein n=3 Tax=Bacteria RepID=C3RLW4_9MOLU Length = 271 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 35/273 (12%), Positives = 88/273 (32%), Gaps = 8/273 (2%) Query: 2 NGLLRIRQRYQGLAQSD--KKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 + R+ +++D +A Y+ + QLA E VS +++ +F + LG Sbjct: 3 SLFYRLIIFLDTASEADTNYNIAWYMAHNFSKVAKMGISQLAKECYVSPATISRFCRALG 62 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 Y+ + LK S + + ++ D + + + A+ Sbjct: 63 YENYAHLKQECSSFASDSKKFNNLINVPLDMMKDKPQECTKYYSDQVCDAISKLSQRLDW 122 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + + + + + + G S A +F L+ + A + + + Sbjct: 123 NVIDKVLQAIHDSDSVAFFGTQFSHSAALHFQTDLLMLEKFTMAYMETERQIDCARLMDE 182 Query: 180 DDLLLAISYTG-VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 + + + ++ G R + + + KV+ +T + ++ + EQ Sbjct: 183 NSVAIIVTVNGFYARSNSKVLQYLKKSKCKVVLMTNNPGIDIGINVNYTIVLGDSEQRKI 242 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERI 271 +L+ + E+I Sbjct: 243 GKHT-----LLTAVELMSLRYYSLYYPGIQEKI 270 >UniRef50_Q184P9 Phosphosugar-binding transcriptional regulator n=5 Tax=Clostridium difficile RepID=Q184P9_CLOD6 Length = 261 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 90/271 (33%), Gaps = 21/271 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I Y L +D + Y+ +S +LA + VS++++ +F +KL Sbjct: 1 MRLEEMIFFNYNKLNDTDLLIWKYITANKKHCSKMSINELAMKCNVSRATITRFVKKLDL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGF K+ LS + + ++ + ++ + + Sbjct: 61 KGFSEFKVLLSWE------------------SEKVHVIENQSFDIACNSIIKYVEDQKNK 102 Query: 121 KLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 +L +R I G G +VA+ + + S Sbjct: 103 DYDALCKLLYESRTIYAYGSGDIQNVVAKQIKRMFLSCQEIIYDFEGRTFDDSFYNIVSK 162 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +D+++ IS +G A + +G K+++IT F N L + +Y A + Sbjct: 163 NDVMIIISLSGENENTLNIARRLKLIGTKIISITEFKNNTLTDLSDESIYISATNISFLQ 222 Query: 240 ASISACHAQGM--LTDLLFIALIQQDLELAP 268 S L +LLFI Sbjct: 223 MHPSYKLTMLYFILIELLFIKYSIYKRHRMI 253 >UniRef50_D2TS37 Putative DNA binding protein n=1 Tax=Citrobacter rodentium ICC168 RepID=D2TS37_CITRO Length = 282 Score = 131 bits (329), Expect = 3e-29, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 106/278 (38%), Gaps = 16/278 (5%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L+ IR GL+ +K+ ++ PD + +LA+ S+ S+ +F + G+K Sbjct: 7 NLLINIRNEVAGLSPILEKVGRFVTENPDFVMRHTITELADSIETSEGSITRFCRAFGFK 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF + AL+ + +G++ + V + + + ++ Sbjct: 67 GFSDFRTALALE--------QGAARPEAQGNEEIADVVTSIRDSYA--------IINSQE 110 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L L + + +G + VA L+K+G +A+ V + ++V Sbjct: 111 LQAAAAWLNQVNNVAIYAVGTAVPVALFLQMNLIKMGKSASFVDRFYLTTSSVMLEPQSQ 170 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++ + ++ A + G ++L++T T L + + L + Sbjct: 171 GVIVVHTEQTSADMMQALALAKQHGARILSLTRGTFAPLSRLSDWNLQAAVALKGEGEFG 230 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + M+ D L AL +QD A R H +++ Sbjct: 231 FAEIAGAMMVADRLLNALEEQDERYAECRKAHQKSIFS 268 >UniRef50_C2ECD8 Transcriptional regulator n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2ECD8_9LACO Length = 252 Score = 131 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 99/262 (37%), Gaps = 21/262 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ ++ + L+++DK++ YL A + S +L S+S+V++ A+KLG+ Sbjct: 1 MSFEDNVKMHFDELSENDKEIVRYLQQNMADAINSSIIELGEATLSSKSTVLRLAKKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GF LK L + + + L ++ + T + + Sbjct: 61 RGFSDLKFQLEQDYKADKI------------------IPTDLEQQLHHDIGKTFEYSHQV 102 Query: 121 KLHECVTMLRSARRIILTGIGAS-GLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + + A + + G S A+ F+ L+ G + + + Sbjct: 103 NFQPLIEAIHDASNVYIYPTGFSQQNFAREFSNDLLIAGKKNYLLDGTTNFDRVTRKLNQ 162 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT--IAEEQAT 237 +D ++ +S +G + A + +IT F+ N L + A++ L+ A Sbjct: 163 NDFVIVVSLSGNTPLIKNAIKMLNFRKVPFFSITEFSRNYLSEHANYQLFYEASVIPTAE 222 Query: 238 NSASISACHAQGMLTDLLFIAL 259 +S+ + ++ +L Sbjct: 223 PGDKMSSMTSLPIILGILSRKY 244 >UniRef50_C7QJ71 Transcriptional regulator, RpiR family n=5 Tax=Actinomycetales RepID=C7QJ71_CATAD Length = 323 Score = 130 bits (328), Expect = 4e-29, Method: Composition-based stats. Identities = 62/270 (22%), Positives = 98/270 (36%), Gaps = 13/270 (4%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L+ + +++A YLL LSS +LA GVSQ SV +FA LG+ G+P L+ AL Sbjct: 56 RLSPAQRRIAHYLLENLPEVAFLSSMELAERVGVSQPSVTRFAAALGFSGYPELRAALR- 114 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 P IH + + L E + N A++ +L + L ++ Sbjct: 115 --PIALRVPEAGIHGERIAGNELHSALES-DQANLEALHKYAA--DPARLSRLGSDLAAS 169 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLAT---VQASSPDDLLLAISYT 189 + + G+ S VA FA+ +I + V +L ++ L+ Sbjct: 170 EPLSVIGLRMSAPVASYFAYGAARIHPDVRVVHTPGSLAHEALLQAVAAGGTWLVVFVLP 229 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQG 249 E + +G K IT A L ++ + A Sbjct: 230 RYPAESVVVLRSARELGLKTAVITDVPLVPFAHLADVLLPVGVGSRSV----FDSHAAPM 285 Query: 250 MLTDLLFIALIQQDLELAPERIRHSEALVK 279 LL AL E ER+ EAL + Sbjct: 286 AFAALLLQALADAAPERTQERLEAYEALAE 315 >UniRef50_Q14LR0 Hypothetical transcriptional regulator with helix-turn-helix domain transcription regulator protein n=1 Tax=Spiroplasma citri RepID=Q14LR0_SPICI Length = 283 Score = 130 bits (328), Expect = 4e-29, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 116/279 (41%), Gaps = 9/279 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L + L ++ + + P + +LA VS+S++ + A+ LG+K Sbjct: 1 MLSLLTYDKNTLTDTEISVIKQIFQNPLLFTSKTITELAKTYYVSESTITRMAKHLGFKN 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 L++ + E L ++ L+ + + + +++ T++ E L Sbjct: 61 IKELQMHIYERLNFLNKNYETNETM------NLKDIANNMRVYYSYSIHETIDNIDLEVL 114 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + +RI GIGAS L + L IG+N ++H+L+ T+ + DDL Sbjct: 115 DRLINDIVLKKRIFAFGIGASFLACRVLHSNLNMIGYNCYTTENIHSLMVTLSNAEADDL 174 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTP-NALQQRASHCLYTIAEEQATNSAS 241 ++ S +G E+ + ++ V +T + L + L+ + ++ + Sbjct: 175 IIIFSKSGKTNEVVNIINLANKLNIDVALVTNNPNIDELYKIKHKILFEVHTKENERFPA 234 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +S+ Q +++D++F +L++ E + + + Sbjct: 235 LSSKIVQILISDIIFRSLLKIHP--NLENKIKAANAITE 271 >UniRef50_C3W9G1 Predicted protein n=3 Tax=Fusobacterium RepID=C3W9G1_FUSMR Length = 260 Score = 130 bits (328), Expect = 4e-29, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 101/261 (38%), Gaps = 9/261 (3%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L + R + + + +A+++L LS ++LA S S++ +F +++ F Sbjct: 8 LKKCRDNNELFPKIEVIIANFILDNHKIIPDLSIKELAQRCNTSTSTISRFCKRINGSDF 67 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 LK + +I R + E I + AM T N EK+ Sbjct: 68 KTLKEECR-------IYNNFLEEKEIVKPTNQRTLNESYITDLFKAMKETSQANDIEKIK 120 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 + ++ A++I G S ++AQN + K M++G N + + + PDDL+ Sbjct: 121 NAIFWIKEAKKIFFFGTSFSNILAQNISEKFMRLGKNTICPLTISSQNNIITQIKPDDLV 180 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + IS++ ++N + + K + I+ + L + + I Sbjct: 181 VIISFSNNNFQINRIKRILRKKQIKTIYISSKQDSNYNNE--ITLLVSSLNYKEFESPII 238 Query: 244 ACHAQGMLTDLLFIALIQQDL 264 + + + L++ I+ Sbjct: 239 QEFSINYIINYLYLFYIESSY 259 >UniRef50_B1IEE2 Transcriptional regulator, RpiR family n=11 Tax=Clostridium RepID=B1IEE2_CLOBK Length = 253 Score = 130 bits (328), Expect = 5e-29, Method: Composition-based stats. Identities = 41/267 (15%), Positives = 98/267 (36%), Gaps = 23/267 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ I+ + GL + + ++ +Y++ + + + +A S S++++ A+KLGY Sbjct: 1 MDISKFIQNK--GLTEIEIEVLNYMIDNINDINKMGVRGVAKNNFTSTSTIMRLAKKLGY 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF ++ L ++ + + M + L NS E Sbjct: 59 SGFLEMQYNLLSLTKNELKDNLNDSGFI-----------------ESLNMDSLLEENSTE 101 Query: 121 KLHECVTMLRS--ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 ++ + +L + + I + G SG+VA+ KL+ +G ++ Sbjct: 102 AINNFIDILFNDDHKFIFIYANGFSGIVAEYINKKLLVMGKRCILSNGTDSIGVFENNLD 161 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 ++ IS +G + KV++ T N++ + + + + Sbjct: 162 FISAIIVISKSGETPMVLNKVKTAKEHNIKVISFTNERENSISKLSDIRFKIKDTNKLDD 221 Query: 239 SASI-SACHA-QGMLTDLLFIALIQQD 263 + + +L +LL ++ Sbjct: 222 RNLMPNTFFPKVLVLIELLVYEYYKKK 248 >UniRef50_Q1YL64 Possible transcriptional regulator n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YL64_MOBAS Length = 278 Score = 130 bits (327), Expect = 5e-29, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 91/265 (34%), Gaps = 6/265 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L + + L + K+ A L D + +A A V S+ ++F Q LG G Sbjct: 18 LLASLDRIDGTLPKRLKQCAICLRANLDRVAVSTVADMAQLAEVPPSAFMRFCQTLGLSG 77 Query: 63 FPALKLALSEALASQPESPSVPIHN-QIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + ++ A + + + G + + ++ ++ Sbjct: 78 YSEMQALFRAEYAQMRPDYTERLTRLRAEGVSGAGRLAADFAEAGIRSLMDMSKELDAQQ 137 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L L AR I L G+ + V A+ L K+G + + + PDD Sbjct: 138 LQAVAERLAGARTIHLVGLRRAFAVVVYLAYLLDKMGVASMLHHTTGQIESDHA-IGPDD 196 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L A+++ +E A + G VLA++ T L + A + L E Sbjct: 197 ALFAVTFAPFSQETLTLAARVSERGIPVLAMSDTTSCPLAEVAENLLIAREVE----VGG 252 Query: 242 ISACHAQGMLTDLLFIALIQQDLEL 266 A +A L L +A+ E Sbjct: 253 FRAPNAGLALVTALAVAVGGLRKEK 277 >UniRef50_C2GZH1 RpiR family transcriptional regulator n=17 Tax=Enterococcus faecalis RepID=C2GZH1_ENTFA Length = 256 Score = 130 bits (327), Expect = 5e-29, Method: Composition-based stats. Identities = 36/256 (14%), Positives = 100/256 (39%), Gaps = 17/256 (6%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 L ++ ++ Y+ + +++ ++LA+E S++++ +F QK +G+ K L Sbjct: 14 PQLNPTELEIYKYISHNIEKVPYMTIRELADEIHFSKTAIWRFCQKFECEGYTDFKFKLK 73 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 L+ + ++ L + + E ++ + +L Sbjct: 74 NYLSERKKTAQPK---------SLDETM------LIHFLQRSSEELLEGRIVQAAELLAK 118 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKI-GFNAAAVRDMHALLATVQASSPDDL-LLAISYT 189 ++ G G S ++A+ I +A+ ++ + + + ++A+S + Sbjct: 119 KEFVLFIGEGTSKVLAEFGEIYFSSIYNLSASVSHLFSHPVSKLSEETAKKVGVIALSVS 178 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQG 249 G +++ D + +G V+AIT + + Q ++ + + ++ A +++ Sbjct: 179 GETQKVRQNIDYFIEMGIDVIAITNSEKSTIAQLSTVTIPYYITTEKSSIADVTSQLPAL 238 Query: 250 MLTDLLFIALIQQDLE 265 L + L + E Sbjct: 239 FLIEKLAKTVSTMLNE 254 >UniRef50_C7LIK3 Transcriptional regulator, RpiR family n=39 Tax=Rhizobiales RepID=C7LIK3_BRUMC Length = 314 Score = 130 bits (327), Expect = 6e-29, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 105/278 (37%), Gaps = 10/278 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + I +R + ++ A L+ + + + +AGVS ++++F +LG++ Sbjct: 44 SVAELINERIDAMPAGERSAAQMLIANYPMLGLKTVAEFSTQAGVSSPTILRFVNRLGFQ 103 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 +P + L + LA+Q +SP + D E + + T E++ Sbjct: 104 SYPDFQARLQDELAAQLQSPHHRNEQPDKRPDAADPGVEHTL----ENIRETFRHLGEKQ 159 Query: 122 LHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQASSP 179 LH+ V L A+ + L G + +AQ + + + + Sbjct: 160 LHQVVASLSLAKGNVYLIGGRFTDPIAQYMTAHMSIVRARVFHLGGQESMWRDRLLDMGK 219 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+L+ + L A++ G +V+ +T + + + A H L + Sbjct: 220 RDILVVFDIRRYQESLLALAEKARSRGVEVVLVTDQWLSPIARVARHVL----AGRIAVP 275 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + + A +L + + + + + + RI EAL Sbjct: 276 SVWDSSAALFVLAETIIREMTRMLEKDSAARIAELEAL 313 >UniRef50_A3SJ61 SIS domain protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SJ61_9RHOB Length = 245 Score = 130 bits (327), Expect = 6e-29, Method: Composition-based stats. Identities = 38/241 (15%), Positives = 76/241 (31%), Gaps = 7/241 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L I L + + A Y+L +PD S + +A GV+ +++ + A ++G+ Sbjct: 1 MELLENIGDALPDLPRKLARAARYVLDRPDHVALGSMRAVAQSCGVAPTTMQRLAHEMGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + + L Q V D + ++ + + + Sbjct: 61 DSYDKFRAVFQRELVGQGFGAKVDALQDNFSDLSQGKLALTHLESVRENLDSLQASLNGA 120 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQN----FAWKLMKIGFNAAAVRDMHALLATVQA 176 + + L +R + G +A + L + + Sbjct: 121 AVEDFARSLHRSRHCHIIAGGTLSWLASFTEVTGSMALSNL---VTPAGPAVDSTERIAH 177 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 P+D+LL IS + RE+ A + G K A+T + + H Sbjct: 178 IGPEDMLLVISVSPYAREIISALEYARDRGAKNYAVTDRPSSPVVPLCRHAFLAPTASPH 237 Query: 237 T 237 Sbjct: 238 Y 238 >UniRef50_C4XF00 Putative uncharacterized protein n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XF00_MYCFE Length = 274 Score = 130 bits (326), Expect = 7e-29, Method: Composition-based stats. Identities = 46/272 (16%), Positives = 100/272 (36%), Gaps = 16/272 (5%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 + +++K+ DY+ P+ S ++ A E S + + + +KLG+ + ++ + Sbjct: 11 MTNAEQKIIDYINENPNEFAENSIEKNAVETFASTAVLSRIYKKLGFSSYKDMQFYVKYN 70 Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR 133 S + P + N I K+ K A+ T +++ + ++ Sbjct: 71 YLSNLKIPKELLDNSIY----------KIAKTYMEAINLTSKYLDIKEIDYICEEINKSK 120 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHAL---LATVQASSPDDLLLAISYTG 190 + GIG+S + A+ + + K + + D H L + + ++ S +G Sbjct: 121 LVYCFGIGSSSISAKELSLNIEKFDYYSVFHNDFHNFLISLYSHELKENKPPVILFSKSG 180 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGM 250 E+ + +L L IT +L+ + H L EQ ++S+ Q Sbjct: 181 KTNEILFLCETLLEHKFPFLLITANR--SLKNKYPHVLLHETIEQKERYHALSSKIVQQY 238 Query: 251 LTDLLFIALIQQDLEL-APERIRHSEALVKKL 281 + D++ LI + L Sbjct: 239 IADIIADHLISNSPNKLNRKNWLKMINEWNNL 270 >UniRef50_B9KVH6 Transcriptional regulator, RpiR family n=2 Tax=Rhodobacter sphaeroides RepID=B9KVH6_RHOSK Length = 280 Score = 130 bits (326), Expect = 7e-29, Method: Composition-based stats. Identities = 49/265 (18%), Positives = 98/265 (36%), Gaps = 7/265 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + R+ + + + + A YL+ PD ++ +A AGV S++++FA+ G++ Sbjct: 13 DLCTRLAADLETMPKRLAQTASYLVAHPDEVAFGTTASIAEGAGVQPSTLIRFAKANGFE 72 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRL--VGEKLIKENTAAMYATLNVNSE 119 GF L+L E L + +S + + D + V I ++ Sbjct: 73 GFSDLQLLFRERLRDRNQSYDSRLATLGQDADQVPSRAVLNGFIAAGQESLAWLQRDMDL 132 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLAT-VQASS 178 ++ +L A + L + + L K+G + ++ + + + Sbjct: 133 DQFDAAAALLARAGTVYLVARRRAFPPLIQLRYALAKLGIRSEICGSVNGIDNDLLAFAG 192 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 PDD + IS+ + AA++M ++AIT + L A L + Sbjct: 193 PDDAAILISFAPYTAQTIEAAEQMRAQEVPIVAITDSRLSPLCTGAGARLLLA----EAD 248 Query: 239 SASISACHAQGMLTDLLFIALIQQD 263 A A L L +A + Sbjct: 249 YAGFRTSTAAMTLVMALSVATAEHR 273 >UniRef50_Q1GL90 Transcriptional regulator, RpiR family n=9 Tax=Rhodobacterales RepID=Q1GL90_SILST Length = 304 Score = 129 bits (325), Expect = 9e-29, Method: Composition-based stats. Identities = 53/278 (19%), Positives = 96/278 (34%), Gaps = 8/278 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L I+ R + L K A Y++ P + A++AGVS +++ + A+ Y+G Sbjct: 13 LLSTIKSRIETLPPKLKTAAKYVIDSPGDFGLDPIRVSADKAGVSPNTLTRLAEVFDYEG 72 Query: 63 FPALKLALSEAL-ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F + AL + +Q+ D + + + +L + + E+ Sbjct: 73 FEDFRAPFRAALVTDREADLGSEWLDQLAAGDQTSALQARAARNALNITARSLRLMTPER 132 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA--LLATVQASSP 179 V + SAR +T ++ +A F + ++ + H + P Sbjct: 133 TTAIVDAMTSARHCFVTASRSTHALAYYFHYV-GRMALPTLELVPRHMGDAADDLLDIGP 191 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D L A+++ A G V+ ++ A RA H L A+ Sbjct: 192 QDCLFAMTFAPYSTSTIRAIRMAREAGATVILLSDSDTIAPGVRADHQLTFSAQSPHHFG 251 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 +L + L LI A RI E L Sbjct: 252 C----LSGAMVLLESLLSHLIHAGGADAQARISRYETL 285 >UniRef50_UPI0001AF5353 RpiR family transcriptional regulator n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF5353 Length = 311 Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats. Identities = 52/281 (18%), Positives = 110/281 (39%), Gaps = 8/281 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + IR RY+ ++ ++KL+D +L P ++ +LAN AGVS+++ +F + LGY Sbjct: 15 SLESSIRGRYEQMSALEQKLSDVILASPGQLAMQTATELANHAGVSKATTTRFFRSLGYD 74 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + + + EA + + + + D + + + + + A + T + + Sbjct: 75 SYESAR---REARKASTGGSPLYLQHLGDEDRDPQALIQHHLDQEVANLVKTYGSLDQTE 131 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSPD 180 L E + ARR++L G S +A F L+++ + + L + Sbjct: 132 LFEIAQAIAKARRVVLIGYRHSQTIAVMFRSNLIQVRGDILLLPAPGDSLAEYIAGLDER 191 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ + I +L A M R+G ++L I+ + A + Sbjct: 192 DVAICIGLRRRVPQLESATSAMSRLGVQLLYISDVLAGTPAKLARWVIRCHTAGSLM--- 248 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + +T+LL + ++ P + K Sbjct: 249 -FDSNASVSSITNLLCSLVGKELPAKNPPTWHRLRSCTKNW 288 >UniRef50_D1PQY5 RpiR-family transcriptional regulator n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQY5_9FIRM Length = 258 Score = 128 bits (323), Expect = 1e-28, Method: Composition-based stats. Identities = 49/265 (18%), Positives = 95/265 (35%), Gaps = 27/265 (10%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ ++ + L +++++ Y+L D A + +A + S S++++ + K+GY Sbjct: 1 MDIKKMVQGK--KLTDAEQQVLIYILDHLDVALAQGVRDIARQNYTSTSTIMRLSHKMGY 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF + L E S + + + L N+ + Sbjct: 59 AGFVDMCYKLRTLTQEHTEQVSEAQNFLDGF-----------------NLDSLLAYNAYD 101 Query: 121 KLHECVTMLR--SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 +L C + + + I + G SGLV + A KL +G ++ + Sbjct: 102 QLKACAQHIAGLNGKFIFVYATGFSGLVGEYLAKKLTNMGRLCLFAGGGDSVGMFENSLD 161 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL----YTIAEE 234 L L +S +G + G +AITG PN++ Q A Y ++ Sbjct: 162 SMGLFLCVSKSGETALVRDKIKTARENGVPTVAITGERPNSVSQYADLWFRVEDYCKLDD 221 Query: 235 QATNSASISACHAQGMLTDLLFIAL 259 Q + ML +L+ Sbjct: 222 QNVRPNTFFPQ--ALMLAELIAYEY 244 >UniRef50_Q8EMY0 Putative uncharacterized protein OB2710 n=1 Tax=Oceanobacillus iheyensis RepID=Q8EMY0_OCEIH Length = 276 Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats. Identities = 48/273 (17%), Positives = 105/273 (38%), Gaps = 17/273 (6%) Query: 1 MN--GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 MN + R + + + KK+ YLL +P ++++ + VS++ V++F + Sbjct: 1 MNREYVERTKTNLPEMTKGLKKVGRYLLAEPIVFAIHPAKKVGSMIDVSETMVIRFCHFI 60 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 GY+G+ L+ + L S S + E+ I+E+ + N+ Sbjct: 61 GYRGYADLQKEVRHHLISLENSNDK------KNVSTKESNFEQFIEEDVKNLKQMKNIID 114 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 + L++ + + + ++I+ G S A F++ L I NA+ R ++ Sbjct: 115 VDVLNDVIERILDSEKVIVAGYYHSFSFAHWFSFNLNYIVGNASLFRPESDA-GILELMP 173 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA-- 236 ++ S+ + A+E + G V+ IT + + A + + + + Sbjct: 174 KKSCIIIFSFFRYAIDTIRLAEEAKKKGVPVIVITDSWASPAAEYADFVISIYSSDNSNV 233 Query: 237 -TNSASISACHAQGMLTDLLFIALIQQDLELAP 268 I+ L + + LI Q + Sbjct: 234 LLQKGPIT-----MSLMNSILSKLIDQVQDRGK 261 >UniRef50_C5F7B7 Phosphosugar-binding transcriptional regulator n=1 Tax=Lactobacillus paracasei subsp. paracasei 8700:2 RepID=C5F7B7_LACPA Length = 252 Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 104/260 (40%), Gaps = 14/260 (5%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + ++ + L+ S+ K+ D++ D + +S +A + S ++V + QK G G Sbjct: 2 IIQLNQEIFNSLSASEHKVIDFINNNADAVQTMSITNIARKTFTSVATVSRAIQKAGLNG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 L+ +S + ES S ++ ++ T++ S + Sbjct: 62 IAELRYQISHQIKHANESESPYK-------------VNTILLKSFREAKKTIDSISISGI 108 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V + A RI++ G + L+A+ F L +G+NA ++D+ + T + S D+ Sbjct: 109 LQTVDYINKADRILIYARGFTALIAEEFQQDLQLLGYNAIIMKDVMWIKQTRRFISKRDV 168 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE-EQATNSAS 241 + + E+ +A+ + +G K++ P L + + +E T+ Sbjct: 169 AVIFTVRNSTPEILESAETIHAIGAKLVTCCCIAPTKLADYSDVLISGHSELIMRTHGLE 228 Query: 242 ISACHAQGMLTDLLFIALIQ 261 + + ++ L + Sbjct: 229 VYSKVPLFIIARTLIEYIAN 248 >UniRef50_A1FB39 Transcriptional regulator (Fragment) n=1 Tax=Vibrio cholerae 2740-80 RepID=A1FB39_VIBCH Length = 170 Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats. Identities = 37/171 (21%), Positives = 75/171 (43%), Gaps = 9/171 (5%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 R+R + L++ + +ADY+L ++ + LA S+++VV+ + LGYKG+ Sbjct: 3 RLRSNTEPLSKKLRVVADYVLENAHEVQYQTITDLAFNTKTSEATVVRLCRDLGYKGYSD 62 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 ++AL+ L+ + + E + ++ T + L+ Sbjct: 63 FRMALAVDLSQSANQSQPKMDG---------DICEVSAQSAVDSLMDTAKLIDRAALNRI 113 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA 176 ++ A+ I G+GAS +V + A++L++IG A D H + Sbjct: 114 CELVHGAKFIGCVGVGASSIVGRYLAYRLVRIGKKAIMYEDTHLAAMSAGQ 164 >UniRef50_C4L7E2 Transcriptional regulator, RpiR family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L7E2_TOLAT Length = 282 Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 98/281 (34%), Gaps = 12/281 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RI + + + +++LA++LL SS +A A VS+ V +F ++LGY Sbjct: 6 LAQRIYLQLEQMGPKERQLAEFLLTHEAELAIYSSADMARLARVSKPVVSRFFKRLGYDS 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F ++ L + S + + + + + TL L Sbjct: 66 FAEVRQDLRKVQTSGSPLLAD------QQPSDIGTLLANHQAQEARNWQQTLTDLQRLPL 119 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQASSPDD 181 + SAR+I + G S VA ++ +L+++ V L + + D Sbjct: 120 DVIADTMCSARQIKVIGFRNSYPVALHWRQQLLQLRTCVDLVPQPGQTLAEELSQLNEQD 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++ ++ + + + L IT + A L + Sbjct: 180 LVIMVAMRRRPVNVKRIMQWLGKSPATCLLITDPSGLEHATHADWTLTCH----QISPGG 235 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAP-ERIRHSEALVKKL 281 ++ + + L+ Q+ + + + I L+ +L Sbjct: 236 FASYASAMAVVSLMSNLCQQKLSDDSRVQAIDDLFDLMDEL 276 >UniRef50_C1YLY0 Transcriptional regulator n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YLY0_NOCDA Length = 277 Score = 127 bits (320), Expect = 4e-28, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 102/268 (38%), Gaps = 9/268 (3%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L ++ +++ L +P A + S+ +LA AGV+ ++VV+ AQ LG+ G+PAL++ L Sbjct: 13 RLGRAAERVVRVLRDEPRFASYASTAELAERAGVNVATVVRAAQALGFTGWPALRVELRS 72 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 + + V + DP+R + + + ++ + A Sbjct: 73 RYLASLSAGEVLAEHAGSDADPVREA----FRADREGLRDLERTLDPARVRALAGAVHGA 128 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSPDDLLLAISYTGV 191 RR + G G A +G++ + L++ + P DLLLA + Sbjct: 129 RRTRVVGSGTFAAPGVQLAHAAGIMGYDVERLELGGTGLVSALARMGPGDLLLACDLWRL 188 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGML 251 L AA V IT + L + A+H L +E + + Sbjct: 189 PVALRSAARVARERSVPVAVITDRRDSPLAEGAAHVLLVPSE----GVGMFPSLTPVMAV 244 Query: 252 TDLLFIALIQQDLELAPERIRHSEALVK 279 + L + + +R +E L + Sbjct: 245 VHAVLAELARLGGDEVLAAVRDTERLWE 272 >UniRef50_C9Q7M3 Transcriptional regulator n=2 Tax=Vibrio RepID=C9Q7M3_9VIBR Length = 284 Score = 127 bits (320), Expect = 4e-28, Method: Composition-based stats. Identities = 42/285 (14%), Positives = 100/285 (35%), Gaps = 11/285 (3%) Query: 1 MNGLLRIRQ--RYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 MN + I + ++K + +Y + +L ++ GV ++++ +F +L Sbjct: 1 MNKQVFINSVNNLKSTTPAEKLIIEYFIKNYTMLPFAKMDELCHQIGVGKATLGRFLNRL 60 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 G+ GF K +SE L + +P + + P + +E + + +T + Sbjct: 61 GFDGFIGFKKTVSEELVQELTTPIDRCNK-LNIQSPYDELITNHYQEIVSNLESTYQLMQ 119 Query: 119 EEKLHECVTMLRSA-RRIILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQA 176 + L + ++ + G ++ +A F + + + D L + Sbjct: 120 SNDFSLAIEHLLNPQGKLYIMGSASAEALANYFFLLARYLRKDVIFLKADPSTLPHQLVD 179 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 P D+L A+SY + GGK++ +T N + + + Sbjct: 180 VEPADILFAVSYHRFSSITVRCVRWFKQNGGKIIVLTDQQVNPFVAYSDIQFTAESHSEG 239 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + + ++L + + + +R R E Sbjct: 240 L----FNNRTSGFSIIEVLIKGMSITNDKD--KRFRRIEDTFNNF 278 >UniRef50_C5EFT9 HTH-type transcriptional regulator glvR n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EFT9_9FIRM Length = 256 Score = 127 bits (319), Expect = 4e-28, Method: Composition-based stats. Identities = 52/263 (19%), Positives = 106/263 (40%), Gaps = 19/263 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN I Q Y+ L +D + +Y++ +++ +L++E +S +S+V+ +KLG+ Sbjct: 1 MNLEALINQYYKNLNSNDMIVLNYVMQHKKECTNMNISRLSSECSISTASIVRTMKKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ K L N L + EK + AT+ + + Sbjct: 61 SGYSEFKFLLK----------GQNPGNMPTEGSNLIELLEK-------DIQATMKLMKQV 103 Query: 121 KLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 L+ +T+L +A+RI G G Q+FA ++ + + L + Sbjct: 104 DLNPILTLLYNAKRIYGFGTGFRQQNALQDFAHNMVSCDKSIFLIPAKQELDTQISFMKQ 163 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D++L SY+G ++ + + + +++IT F N L + LY + N Sbjct: 164 GDIILIASYSGDIKDYVESIHTLKLLDIPIISITNFNKNDLSTFTPYNLYYQSTSLTPNL 223 Query: 240 ASISACHAQGMLT-DLLFIALIQ 261 + + D+L+ ++ Sbjct: 224 KPKRISYPTLNIVQDILYREYVR 246 >UniRef50_Q046R3 Transcriptional regulator n=7 Tax=Lactobacillus RepID=Q046R3_LACGA Length = 263 Score = 127 bits (319), Expect = 4e-28, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 95/258 (36%), Gaps = 10/258 (3%) Query: 8 RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALK 67 + L+ ++ L + + P +S +L+ A VS +++V+ QK+GY G+ + + Sbjct: 11 NMQNNDLSNAELHLWEIVQNNPQKIAKMSIVKLSQFAHVSTATIVRTMQKMGYSGYTSYR 70 Query: 68 LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 +L ++ + + +I +N M TL+ S + + ++ Sbjct: 71 ESLK---------LQDRSNSNFDVLNEADDKIKSVITKNEIEMNNTLHNLSYSNIEDSIS 121 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAIS 187 M + A+ + + G S + Q KL G D + + + D L++ IS Sbjct: 122 MTKQAKVVYIFARGLSESIGQEIMVKLQLTGKYVEFHADPNIIKTASKRIKQDALVIFIS 181 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY-TIAEEQATNSASISACH 246 G EL AA + + T L ++ +++ + + Sbjct: 182 LNGNTPELVDAAKSLSHHDVPTITFTTNPKGQLASLSTLTFMGYMSKTNYFPDYEVRSRL 241 Query: 247 AQGMLTDLLFIALIQQDL 264 ++T + A + Sbjct: 242 PLQIMTRIFSDAYSVRTG 259 >UniRef50_Q88GX5 Transcriptional regulator, RpiR family n=7 Tax=Proteobacteria RepID=Q88GX5_PSEPK Length = 307 Score = 126 bits (318), Expect = 7e-28, Method: Composition-based stats. Identities = 51/285 (17%), Positives = 91/285 (31%), Gaps = 9/285 (3%) Query: 1 MN--GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 M+ R+ +G A S +K+A Y+L +S +A + GVS+SSV ++ + L Sbjct: 18 MSQLIKQRLENSLEGAAASGRKIATYMLANLHELPFQTSASIAAKLGVSESSVGRYCRSL 77 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 GY ALK L L P + + + D G ++ AA+ Sbjct: 78 GYAHLKALKQDLQNDLGDGPWLVGDRLQDYRQNQDASDNAGS--LELEIAALVRVHEYRQ 135 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQAS 177 H L S R+ + G +A + L + V + Sbjct: 136 SPAWHNVAQRLASKPRVFIAGFQTERGIAMCMSHLLQYLRDGVQLVDISAGHFGEVLLGR 195 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 + D L+ R + + G V +T + A E Sbjct: 196 AEDSALVVFEARRYSRHALMLCQKAREAGIAVTLVTDTFCDWADANADEVFRIPTEFNLF 255 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 + L+ + ++ +R+ + AL + V Sbjct: 256 WE----STSTMLSWVHLMVNEVCKKLGPDVEKRLEATAALHNEFV 296 >UniRef50_A0QRN2 Transcriptional regulator n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0QRN2_MYCS2 Length = 305 Score = 126 bits (318), Expect = 7e-28, Method: Composition-based stats. Identities = 48/273 (17%), Positives = 106/273 (38%), Gaps = 14/273 (5%) Query: 10 RYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLA 69 + L+ + +++A YLL P+ A L+++ L +GVSQ+SV +FA +LG++G+P ++ Sbjct: 39 NRRRLSPAHRRVARYLLDHPEQAAALTAEDLGKRSGVSQASVTRFAMELGFRGYPEMRAE 98 Query: 70 LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTML 129 L +A+Q + + + + K+ + + ++L L Sbjct: 99 LGNQIAAQAKGVPNGLVANVLE--------RTVAKDVANIEGLVSSPWAGQRLDRVGRNL 150 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY- 188 ++ + + G+ S A FA+ K+ + V + ++ +++ Sbjct: 151 AGSQPLPVMGLRISRPFADLFAYFGAKVHPDVRVVPAGSDGDDVLAVAAKAGATWMLAFG 210 Query: 189 -TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHA 247 R L + +G +V +T L L + + +C A Sbjct: 211 LPRYPRALLDSIRYARSLGLRVALVTDSPLCPLAHDVDDLLAAPVNSEL----TFDSCTA 266 Query: 248 QGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 LT L A+ + + R+ + ++ Sbjct: 267 PLALTMGLLQAMTEALPDHGQARLEEFDQRAEE 299 >UniRef50_A6X385 Transcriptional regulator, RpiR family n=2 Tax=Ochrobactrum RepID=A6X385_OCHA4 Length = 282 Score = 126 bits (317), Expect = 7e-28, Method: Composition-based stats. Identities = 55/281 (19%), Positives = 106/281 (37%), Gaps = 9/281 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +LRI++RY L ++K+A +L + D S+ ++A AGVS+++ +F Q LGY Sbjct: 5 LVLRIQERYAKLTAGEQKIAQLVLEREDDILIHSATEIAEMAGVSKATTARFFQHLGYAD 64 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F +KL E + + + PL + A + T +K+ Sbjct: 65 FNEVKLQAREERNRTEPF---EYSSTVDEEVPLVRTISAHLDLEIANITRTFEALRSDKM 121 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASSPDD 181 E ++ A R+ + G+G A+ ++ + + + + + + P D Sbjct: 122 REAAELIAEAPRVWVIGLGDEEGFARYARLLFSRLRHSVMLLGINQGSWAEDLAMTGPKD 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTP-NALQQRASHCLYTIAEEQATNSA 240 +LL I+ R L ++ IT Q+ A L + A Sbjct: 182 VLLLITLPPHRALLKQILGYAATSRLNIVTITDRGSVFEAQRYARVVLPCHVDSIALG-- 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++ A LL + + A +R+ + +L Sbjct: 240 --ASYTAVSSAIRLLALTYASYAGKSAQQRLEIVAGIHDEL 278 >UniRef50_C8SNA8 Transcriptional regulator, RpiR family n=2 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SNA8_9RHIZ Length = 311 Score = 126 bits (317), Expect = 8e-28, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 98/279 (35%), Gaps = 7/279 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + + L S++K+ LL T+ ++ LA AGVS +VV+ KLGY Sbjct: 1 MAIRDVLMRGDLALTPSEEKIVRLLLTDYPTSGLGTASSLARRAGVSDPTVVRLVVKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GFP + L + ++ SP + + + + V + T A+ + Sbjct: 61 DGFPDFQAKLLAEVEARLHSPLLMMEAKRQSGSSDSAVLA-YLDSVTTALQKATAATPVQ 119 Query: 121 KLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATV-QASS 178 +L A+ I+L G S +A A L++ + + Sbjct: 120 TYERAARLLMEAKGEIVLLGGRFSRHIAGMLAGYLVQFRSGVRDLGVLSPQTFDTLADLG 179 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D+L+ Y + ++ A + + ++L T + + A + + E + Sbjct: 180 RRDVLVVFDYRRYQLDVMAYASQAAALDVRILLFTDQWLSPIADLAEVTIVSPLEVAS-- 237 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + L ++ + A RI E + Sbjct: 238 --PYDTLAPAIAQMEALTAHIVSTLGDDARARIERIEKV 274 >UniRef50_UPI0001788C32 transcriptional regulator, RpiR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C32 Length = 280 Score = 126 bits (317), Expect = 8e-28, Method: Composition-based stats. Identities = 55/267 (20%), Positives = 118/267 (44%), Gaps = 9/267 (3%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 GL+ S K+AD++ P+ ++ Q++A+ G S ++V +F + +G++ A KL L Sbjct: 9 SGLSPSQLKIADFIERNPEEMLFMTEQEIADRLGTSIATVSRFWRAVGHENAKAFKLMLR 68 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 E S +P+V + I D + K++++ + T+ N ++L E ++ S Sbjct: 69 E---SSDTTPAVKLEKTISRLD-ASSLPAKMLEQAKHHLQDTMEKNRPDELEEAAGLMAS 124 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASSPDDLLLAISYTG 190 ARR+ + G S + + +++L + G + + H LL ++ +D++L S+T Sbjct: 125 ARRVYVHAPGPSLSLGELLSYRLSRFGMSVRIMAGSGHELLESLAHMEREDVVLIFSFTR 184 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGM 250 + E + D + RV + IT A + + + + Sbjct: 185 MLPETEVILDCVSRVQNAAIMITDREEFRYGTPAQISFFVSRG----DMGEFHSMVTPLL 240 Query: 251 LTDLLFIALIQQDLELAPERIRHSEAL 277 L + L +++ + E ++ + L Sbjct: 241 LIEQLILSMGMLNKEKVLSKLDYLGEL 267 >UniRef50_C7T7R2 Transcriptional regulator, RpiR family n=7 Tax=Lactobacillus RepID=C7T7R2_LACRG Length = 247 Score = 126 bits (316), Expect = 9e-28, Method: Composition-based stats. Identities = 39/255 (15%), Positives = 85/255 (33%), Gaps = 23/255 (9%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + + L +++ + YL+ D L + +A S ++V++ A K+GY Sbjct: 1 MKLEKLVAGK--NLTETEFTVLRYLVANIDRVLDLGVRGVAKANYTSATTVMRLAHKMGY 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GF ++ L + ++ D + A L+ N Sbjct: 59 RGFVEMQYKL--------MTMLRHGEAGMQPVDATEDPLQ----------SAVLDQNDAT 100 Query: 121 KLHECVTMLR--SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 + + ++ + L G SG++ Q K +G + Sbjct: 101 TIRAVAQQIAAVESQYLYLYAAGFSGVIGQYMFKKFQILGKRCFFSTPGDSAALLENYLE 160 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 L + +S +G + + A + + V+A TG + L + A L + Sbjct: 161 DLGLFIVVSKSGETQSVIDKAALVSSLPVPVVAFTGNADSTLAKMADWTLKVADDFPLDE 220 Query: 239 SASISA-CHAQGMLT 252 ++ + Q + Sbjct: 221 LNQRASLFYPQMLAL 235 >UniRef50_C1D3U9 Putative transcriptional regulator, RpiR family n=1 Tax=Deinococcus deserti VCD115 RepID=C1D3U9_DEIDV Length = 313 Score = 126 bits (316), Expect = 9e-28, Method: Composition-based stats. Identities = 52/278 (18%), Positives = 103/278 (37%), Gaps = 8/278 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 ++ + + ++LA Y+L L++ LA AG SQS+V +FA +LG+ Sbjct: 14 FRQFLQSELPEFSGAQRRLALYILQHAAELPMLTTTALAQAAGTSQSTVTRFASRLGFSS 73 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + A AL + + + + LI + + + ++ + Sbjct: 74 YAAFTDALGRMVLDELHMNIPLERFRHSEGNGG---LASLINQEILHLRSLQSLVETKAF 130 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQ-ASSPDD 181 H V +L +R +++ G AS +A + L ++ + +A L T S D Sbjct: 131 HRSVELLTQSRSVLVAGCAASTSLAVHTHLYLSRLRPQVQCATEFNASLFTQAVHYSAGD 190 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L S + +L + + +V+ +T + + + L T + Sbjct: 191 CALLFSVPRMTGDLARMLGLLQQRDVQVILVTDPSGLIFTEGVTETLVVPVSNTPTTAVP 250 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + ML LL A + E + ++ E L K Sbjct: 251 ----ASMMMLASLLIDATALRLPEDSLRNLQRFEGLAK 284 >UniRef50_Q97LM6 Transcriptional regulator, RpiR family n=6 Tax=Clostridiales RepID=Q97LM6_CLOAB Length = 257 Score = 126 bits (316), Expect = 9e-28, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 99/271 (36%), Gaps = 20/271 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + Y L ++D + Y+ +S +LA + +S++++ +F QKL Sbjct: 1 MRLEELVNNNYNKLNENDLHIWKYICCNKRECCTISIDELAKKCNISRTTISRFTQKLSL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GF K+ L L S + ++ Y T+ E+ Sbjct: 61 EGFGEFKVRLKLELGVSNNFKSSSV------------------EDVYQDYYKTIKDMKEK 102 Query: 121 KLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E M+ A+ + + G GA A + + V + ++ ++ Sbjct: 103 DFLEICRMIYGAKHLFVYGTGAVQIAAANELKRHFISVNKFFVTVHGEAEMNMVLETATD 162 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +DL++ IS +G ++ ++ ++IT + N++ + LY I Sbjct: 163 EDLIVIISLSGEKKSAVEYLKKVKVKNIPSISITKLSDNSIARLCDENLYIITRNIKIEG 222 Query: 240 ASISACHAQ-GMLTDLLFIALIQQDLELAPE 269 Q +L ++LF+ I +L E Sbjct: 223 VVTCENVGQYFILIEILFLKYITYLGQLKKE 253 >UniRef50_C2BXZ0 RpiR family transcriptional regulator n=4 Tax=Bacilli RepID=C2BXZ0_LISGR Length = 251 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 92/262 (35%), Gaps = 17/262 (6%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 L+ D ++ Y+ + + + LA S +S+++F +K GF K+ Sbjct: 5 NYNPELSNIDVEIYKYVTSHLEKVVLMRIRDLAKATHCSTASILRFCKKFDCAGFSEFKI 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L L E P ++ + + +E++ + Sbjct: 65 KLRIYLEEMEEIPKTHTVDE---------------SAFMNFIQRSSESFYQERIDAAADL 109 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM--HALLATVQASSPDDLLLAI 186 L ++ G G+S ++A+ A I A ++ D H + + + ++A+ Sbjct: 110 LADKDLVVFIGSGSSNIIAEYGALYFSSIFSMAFSIEDPENHPVSFFNKGLAEKTCVIAL 169 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S G + + + + +++IT + + + + + ++ + I++ Sbjct: 170 SVGGKTKSITNYLNHFIESNSSIISITNSANSTIARLSDINIPYYISTESIGDSDITSQV 229 Query: 247 AQGMLTDLLFIALIQQDLELAP 268 + L + ++ E A Sbjct: 230 PALYTVEYLAKEVRKKKAESAK 251 >UniRef50_C9A749 Putative uncharacterized protein n=1 Tax=Enterococcus casseliflavus EC20 RepID=C9A749_ENTCA Length = 256 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 36/261 (13%), Positives = 90/261 (34%), Gaps = 26/261 (9%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 L + ++ ++ + + ++LA E S +S+ +F +K F K+ Sbjct: 5 DYNPELTALEYEVYRFVSKNLASVSKMKMKELAKETHTSTASISRFCKKFECDTFTEFKI 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L L + ++I D + + + E++ + Sbjct: 65 NLRFYL-------DSLVKSKISDSDESQTI---------DFLKRVNQPFLSERIDRATEI 108 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATV--QASSPDDLLLAI 186 L++ ++ G G S +A+ A +G A V D + ++ + Sbjct: 109 LKNKSFVLFIGSGLSETIAEYGALYFTDLGKTALKVDDPSNYPIDWFPEDILCKTGIIVL 168 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS----- 241 S +G +E+ ++ + +++AIT + + Q + + E + AS Sbjct: 169 SISGETQEMIRYLQKLNQKDCQIIAITNTEDSTISQLSDLTVPYYIERETIFKASQKKEK 228 Query: 242 ---ISACHAQGMLTDLLFIAL 259 +++ L + + + Sbjct: 229 TIELTSQLPAIYLIEKIAKRI 249 >UniRef50_C6ATF5 Transcriptional regulator, RpiR family n=17 Tax=Rhizobiales RepID=C6ATF5_RHILS Length = 291 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 101/267 (37%), Gaps = 7/267 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + I +R + + ++A + L PD ++ +A + V S++V+ A LGY Sbjct: 17 SLRSTIIERKASMPKRLAQVAAFALGNPDEIAFGTTASIAAASDVQPSTLVRLAHHLGYG 76 Query: 62 GFPALKLALSEALASQPESPSVPIH--NQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 GF L+ E L + S + Q GDD + I ++ Sbjct: 77 GFSDLQSIFRERLRDRTLSYEERLVTLEQSSGDDEDANLLSGFIAAANQSVNRLAATVQS 136 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA-SS 178 + + V +L +A I L S + + + K+ V + + + ++ Sbjct: 137 DTFTKAVNILANAETIYLIAKRRSYPLTAHMTYAFSKLNIRHQIVASPNGVDPEMVQFAT 196 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P D +A S++ + + E+ G V+AIT + L A+H + Sbjct: 197 PKDAAIAASFSPYAADSLSQSQELADRGVPVIAITDSAFSPLAACATHWFEVA----EAD 252 Query: 239 SASISACHAQGMLTDLLFIALIQQDLE 265 A + A LT L +A+ ++ + Sbjct: 253 FAGFRSLSASMALTMALPVAIAERRRK 279 >UniRef50_D1AGI8 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AGI8_SEBTE Length = 243 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 46/267 (17%), Positives = 95/267 (35%), Gaps = 27/267 (10%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + L +DK + DY+ DT + +A + S SS+++ ++KLGY Sbjct: 1 MNIERTFKGI--KLTSNDKIILDYITKNIDTCLEEGVRGVAKNSFSSTSSIMRLSKKLGY 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF L L + + ++ +K+ T N ++ Sbjct: 59 SGFVELIYDLKKKMTAKKSEKINI------------SFFDKI----------TFNTRNKS 96 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ + + + + I+ G G S + + KL+ +G + + + +++ Sbjct: 97 EIDQFLKRIHRGK-IMTYGEGFSEIASSYMYRKLLTLGKIVYLLHGIDFDILCEKSAMKF 155 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DLLL +S +G + A + V + TG + L + + + Sbjct: 156 DLLLIVSKSGETKHCIKLAKQAKEENITVCSFTGNAASHLAKLSDISFTYNDPHTLDDDV 215 Query: 241 SISACHAQGMLTDLLFIALIQQDLELA 267 + F LI++ E Sbjct: 216 YYPNPFIGLCIIG--FEELIRRYFEKY 240 >UniRef50_C1YMF9 Transcriptional regulator n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YMF9_NOCDA Length = 296 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 62/274 (22%), Positives = 116/274 (42%), Gaps = 10/274 (3%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 R L+ ++ + D+LL +P A S+ +LA+ G S ++VV+ A+ LGY G LK Sbjct: 3 ARLDSLSPRERAVTDFLLDRPSEAVTASAAELASRTGTSDATVVRTARSLGYGGLRELKR 62 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 A+ + L ++ + V R V ++++ ++ + V V + Sbjct: 63 AVMDMLTTRRDPALVLDQRLERL--SGTRVFDQVLADSVDLLRGLPEVLDAGAFDTAVRL 120 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA-SSPDDLLLAIS 187 + +A R + GIG + A+ FA +L ++G + LA DD ++ + Sbjct: 121 VEAAGRTVAYGIGPASATARYFAVELGRMGRRCTVLEATGFRLADDLLGIGGDDAVVVFA 180 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHA 247 + RE++ D VG V+ +T A+++R L T + S + S A Sbjct: 181 PLRLFREIDALLDHAAEVGAPVVVVTEAVGEAVRERVEAVLTTP----PSTSGAASENLA 236 Query: 248 QGMLTDLLFIALIQQDLE---LAPERIRHSEALV 278 ++ L + L +D A +R+ V Sbjct: 237 SWLVAHALTMELAARDRTGSVAAHQRLNRLRRAV 270 >UniRef50_C3RP07 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RP07_9MOLU Length = 250 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 91/251 (36%), Gaps = 19/251 (7%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L++++K+L YL ++ QLA +S +S+++F KLG GF LK L + Sbjct: 12 DLSENEKELLYYLENSCKEVVSMTLSQLAKATYMSNASIMRFCNKLGLSGFNELKYELKQ 71 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 ++ + +++ EK + + + E + E V +L S Sbjct: 72 SMHQEI---------------DYQMIIEKPLSRFLDNL----KNLNYEIIEEVVDLLCSP 112 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVR 192 + I + G S + A F L I N + D+H + + +S Sbjct: 113 QPIYVVGRSLSLVAADYFQTILSSIDINCILINDLHLSKSVFNNLKAPATIFIVSANNAG 172 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLT 252 + + K++ +T +L + L + E + I++ + Sbjct: 173 KIYDEVVTIAKTHDCKIILLTSNAKGSLVDSCDYVLSSNDENLTYHGVDINSRLGIFTIM 232 Query: 253 DLLFIALIQQD 263 ++ Q+ Sbjct: 233 QIIIELTAQKL 243 >UniRef50_Q1GH80 Transcriptional regulator, RpiR family n=6 Tax=Rhodobacterales RepID=Q1GH80_SILST Length = 295 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 105/281 (37%), Gaps = 16/281 (5%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 + R+++ L+ + A Y++ P S + A +A VS ++V+ +++LG+ + Sbjct: 10 ITRLKEELSDLSPRLQVAAKYIVDHPADFGLDSIRDTARKAEVSTYTLVRISERLGFDSY 69 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN---SEE 120 ++ AL + + P I +G+K + +M + Sbjct: 70 EDMRDPFRVALVAPTQFVDAP--EWINRWRESGELGQKQAEAALNSMAIVQRSLEGQNLR 127 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA--LLATVQASS 178 +L ML A+ + LT + AS +A F + ++ + + H + + + Sbjct: 128 QLQRVAEMLLGAKNVYLTAVRASYSIAYYFHYV-GRMALPSLQLIPRHINSAIDELNYAD 186 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT--PNALQQRASHCLYTIAEEQA 236 D+++AI+ T RE A + + G K++ I+ + L Sbjct: 187 EGDVMIAITLTPYSRETIEACEFARKKGVKLVMISDSEVISSKFTPE--ETLVAST---- 240 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 ++ + + L L+ + +RI E L Sbjct: 241 LSTHHFGCYTGVMAVAENLVSLLVALGGQDVKDRITSYETL 281 >UniRef50_C7RG92 Transcriptional regulator, RpiR family n=2 Tax=Anaerococcus RepID=C7RG92_ANAPD Length = 249 Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats. Identities = 47/264 (17%), Positives = 97/264 (36%), Gaps = 21/264 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + +R+ Y L +D ++ Y++ A L+ Q+A+E G+S SS++ F +KLG Sbjct: 1 MILMNLVRENYSKLNNNDLRIYSYIIQNKSEANELNINQMADELGLSTSSIMTFTKKLGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ LK + +D + I+ + T+ + S Sbjct: 61 DGYSELKYLIK-----------------WSEEDKNSSFDDNEIEYTKNDINLTMTMMSSL 103 Query: 121 KLHECVTMLRSARRIILTGIG-ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 L + AR I + G G VA+ + +G + Sbjct: 104 NLDGLFRKINEARDIFVIGNGYTQLNVAEELKRNFLNVGKILDILDQDSDYERYKGLIKE 163 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+L IS++G +L + + +IT + N + + + + + E + Sbjct: 164 GDVLFVISFSGENEKLIDFIKSLKE-DVTIASITKLSNNTISYLSDYNISFVTHEVYDFN 222 Query: 240 ASISAC-HAQGML-TDLLFIALIQ 261 ++ +Q + D + + + Sbjct: 223 QRMTITPISQYYIVIDFIILKYLS 246 >UniRef50_A9WNR4 Transcriptional regulator, RpiR family n=1 Tax=Renibacterium salmoninarum ATCC 33209 RepID=A9WNR4_RENSM Length = 294 Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats. Identities = 56/236 (23%), Positives = 95/236 (40%), Gaps = 9/236 (3%) Query: 27 LQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIH 86 + D LSSQQLA +G S+++VV+ Q LG+ G+ L++ ++ S + P+ Sbjct: 44 ERADQVVELSSQQLAELSGASRATVVRTCQSLGFTGYQQLRVLVARDAGYSTTSRAQPV- 102 Query: 87 NQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLV 146 + + + A+ A + + + VT L +ARR+I+ G G S + Sbjct: 103 -------GSAAIVAESFAQVREAVGAMTALLASADVERAVTELCAARRVIVAGNGLSAAL 155 Query: 147 AQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVG 206 A + A +L G A D + SP D+LL +S +G G Sbjct: 156 AMDTAARLTATGRAAEFQADAIGQQIAARLLSPGDVLLMLSGSGANSTSAKVVQAAQTAG 215 Query: 207 GKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI-SACHAQGMLTDLLFIALIQ 261 V+ IT F + L A L + + + Q +L + L A+ Sbjct: 216 AMVIVITAFARSPLAALAQINLIVGMPDLSFRDEVTVTTRIPQTILIEGLIAAIAS 271 >UniRef50_D2BPU5 Transcriptional regulator, RpiR family n=4 Tax=Lactococcus lactis RepID=D2BPU5_LACLK Length = 251 Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats. Identities = 49/264 (18%), Positives = 108/264 (40%), Gaps = 22/264 (8%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + + ++ + L + + +++L + +S +QLA VS ++V++ +KLG++G Sbjct: 1 MIDFLPEQVRTLNELETATFNFILSNLSSIDKMSVRQLAQAVHVSTATVMRMTRKLGFEG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + LK L + + L L K+ + KL Sbjct: 61 WVELKYYLKNQNQLTEIPVNYYENLLQ-----LDLFLRKITSKEA-----------GRKL 104 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 E V ++R AR II G+G+SG +A+ A IG + A+ D + +PD L Sbjct: 105 EEAVKLIREARYIIFIGVGSSGALAEYGARYFTNIGLESYAISDPYQA--VKGKGAPDVL 162 Query: 183 LLAISYTGVRRELNLAADEML-RVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + +S +G ++ ++ K+++IT L + ++ L + + + Sbjct: 163 SIVLSASGETDKIIERVVKLREEAPAKIISITNHPETTLSKLSNINLTYGFQTEYSAYDP 222 Query: 242 ---ISACHAQGMLTDLLFIALIQQ 262 +++ ++L +++ Sbjct: 223 LENLTSQLPVIAFIEILAHQAMEK 246 >UniRef50_A2RL75 Putative HTH-type transcriptional regulator n=1 Tax=Lactococcus lactis subsp. cremoris MG1363 RepID=A2RL75_LACLM Length = 241 Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats. Identities = 49/263 (18%), Positives = 100/263 (38%), Gaps = 26/263 (9%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L ++ ++ L +++K + +YL + + + +A EA SSV++ KLGY Sbjct: 1 MAFLGKVD--FKNLTETEKVIYNYLRNNFEKIPRMHVRDIALEAHAGASSVMRLIHKLGY 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + + + S I + + EK Sbjct: 59 HSYYQFQEFV--EKQQLKASTDSDIFQLLSASHYPSELIEK------------------- 97 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + A II G+G SG + + + +G NA ++ DM L + S D Sbjct: 98 -CRQLTEQVLKADSIIFFGLGTSGNICEYAMRRFATLGLNALSLTDMTYPLESHLLESQD 156 Query: 181 DLLLAISYTGVRRELNLAADEMLRV-GGKVLAITGFTPNALQQRASHCLYTIAEEQATN- 238 L++ S +G EL + +++IT ++L Q ++ + EE+ N Sbjct: 157 SLIVVFSISGETGELIEILQHIRNREKVMIISITPKKESSLAQLSNLSINYKVEERRVNL 216 Query: 239 SASISACHAQGMLTDLLFIALIQ 261 +++ +T++L + + Sbjct: 217 YGDLTSQIPAIFITEVLSEMIFK 239 >UniRef50_Q930C4 Transcriptional regulator, RpiR family n=1 Tax=Sinorhizobium meliloti RepID=Q930C4_RHIME Length = 280 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 49/282 (17%), Positives = 109/282 (38%), Gaps = 6/282 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M R++ L ++++L ++ +P ++ +LA GV +++ + A+KLG+ Sbjct: 1 MLIAERVQTIADTLTPAERRLVKEIIAKPRDVALGTAGELARRTGVHEATASRLARKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + + + A+ + + + + E L+++ A+ + EE Sbjct: 61 ETYAGFRHAIRDEFIVKTDPALRVRRTLETSRG--HGMLEMLVQQEIEALTRLSSYVDEE 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSP 179 +L L RRI + G + +A +L ++ F V D + + + P Sbjct: 119 RLAAAAAALSDRRRIFIFARGNAETLAVLMNRRLRRMAFETVLVCGDSRDIAEQILSMGP 178 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD LL ++ R + +VG + ++G +L +A H L A Sbjct: 179 DDALLVFAFRRQPRAYAPLIERAGKVGAVSVVVSGTVGPSLSPKADHLLAAPRAGDAD-- 236 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + + L +++ Q D + + L+ +L Sbjct: 237 -AFQTLTVPMAICNGLILSMAQSDEVRSLSNLEQLGELIGEL 277 >UniRef50_Q7D403 Transcriptional regulator, RpiR family n=2 Tax=Alphaproteobacteria RepID=Q7D403_AGRT5 Length = 292 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 53/276 (19%), Positives = 108/276 (39%), Gaps = 7/276 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 I + L +D +L D L+ P A + + +++ AGV +S V+ A++LG+KG Sbjct: 10 LSDLISRHSTRLTDADTRLLDVLIKDPIRAAMENGKDVSSRAGVHPASAVRLARRLGFKG 69 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRL--VGEKLIKENTAAMYATLNVNSEE 120 +P ++ L L P + ++ AA+ N S+ Sbjct: 70 YPEFRVFLQSNLREGGGDFENPAARMAARLMRAEDNGLLASVLDSEIAALQQARNSVSDA 129 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASSP 179 + T LR +RRI + G G ++ A +L + G+ A + MH L+ + + Sbjct: 130 DIRAFSTSLRDSRRIFIFGRGHFAALSSLIALRLSRSGYEAIDLASQMHQLVEVLATLTA 189 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +D++L +++ L + R G K LA+T + H + + + Sbjct: 190 EDVVLFLAFRRAPPLLQEVREIAGRRGAKTLAVTDVGGTRIDPAPHHQILVSRGDPGESQ 249 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 + + + + + L D + + + + Sbjct: 250 ----SLVVPMTIANAIILDLASIDNGRSLQSLSEFK 281 >UniRef50_C9XKC4 RpiR-family transcriptional regulator n=3 Tax=Clostridium difficile RepID=C9XKC4_CLODC Length = 254 Score = 125 bits (313), Expect = 2e-27, Method: Composition-based stats. Identities = 48/273 (17%), Positives = 91/273 (33%), Gaps = 21/273 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + Y +DK + + +L + LS + A++ +S S++ +FAQKL Sbjct: 1 MKIEGLFNKYYNSFTANDKYICECILNHKEDCIKLSIDEFADKYHISTSALSRFAQKLQL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ L++ + + + + ++ ++ Sbjct: 61 PGYSELRVIIRLN-------------------ETEVEYKNQSKHQLMDCYNKVIDDIEKK 101 Query: 121 KLHECVTMLRSARRIILTGIGASG-LVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++ A RII+ G G S V + + G V + A Sbjct: 102 DCSIMFERMKKANRIIVFGEGYSQERVVKEMKRIFLPTGKIIYDVYGYDMIQALNHFIKT 161 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD++ IS G + A EM G +++IT N L + LY + + + Sbjct: 162 DDMIFFISLNGDTSTIIDFAKEMRMKGTYMVSITKMISNPLARLCDENLYIQSISISVDK 221 Query: 240 A-SISACHAQGMLTDLLFIALIQQDLELAPERI 271 +L +LL+I R Sbjct: 222 QLDYDVTTPYFILIELLYIKYKMYLESEHIPRK 254 >UniRef50_A0K0I4 Transcriptional regulator, RpiR family n=1 Tax=Arthrobacter sp. FB24 RepID=A0K0I4_ARTS2 Length = 274 Score = 125 bits (313), Expect = 2e-27, Method: Composition-based stats. Identities = 46/282 (16%), Positives = 90/282 (31%), Gaps = 15/282 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M RI + Y L ++K AD LL + ++ +LA +GVS++++ + ++LG+ Sbjct: 1 MRIDERIERHYAELGPQEQKAADTLLDRLGDLAMYNAAELARLSGVSKATMSRLFRRLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + F +K +S + + + E+ Sbjct: 61 EDFNEVKEHTRSIRSSGMPLGPQSSDGGLPAHWG----------QEQENLRRLAESLDED 110 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL-ATVQASSP 179 KL L A ++L G S VA +F +L++ + L + Sbjct: 111 KLSAACGKLAGAGTVLLLGFRNSFPVALHFRQQLLQCRPAVSVAPQPGQSLGEELAGLGA 170 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D ++ + G + I L A+ L + Sbjct: 171 GDAVVLFGFRRRPAGFRKVLQGAAATGATTILIGDPGARRLAADAALWLECPVDGAH--- 227 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + A L +L ++ ER+R + L Sbjct: 228 -AFDSYAAAMSLVSVLANGVLVALGRPGRERVREVTGIFDTL 268 >UniRef50_A6VSF8 Transcriptional regulator, RpiR family n=4 Tax=Gammaproteobacteria RepID=A6VSF8_MARMS Length = 272 Score = 125 bits (313), Expect = 2e-27, Method: Composition-based stats. Identities = 50/281 (17%), Positives = 99/281 (35%), Gaps = 20/281 (7%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L I Q Y L+ S + +A+YL P +S ++A S+++V +F ++LGY Sbjct: 6 DVLSLIEQTYPTLSPSARSIANYLQQNPLAIVSQTSAEIAENTNTSKATVSRFFRQLGYD 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + + L ++L + T E Sbjct: 66 S--------QQGAKQAQLALRESGVPIFIQGSSLDQTAQEL-----KNLSLTFEGLRPEN 112 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA-SSPD 180 L++ L A R+ L G + +A +F +L ++ + + L D Sbjct: 113 LNDISERLAKASRVTLIGFRNAYPLALHFRQQLQQVRHSVRLLPQPGQTLGEDLHDILDD 172 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 ++++ + + R+ + + G + IT T Q+ SH L N + Sbjct: 173 EVIVLLGFRRRTRQFKKIVEALE--GRTTVLITDPTGQVYNQQVSHVLVCH----LGNES 226 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + A L +L + + A + + AL + L Sbjct: 227 PFDSYAAPMSLISMLCNRVFGFLGDAASRQTQAISALYEDL 267 >UniRef50_C2HLE6 Transcriptional regulator n=8 Tax=Lactobacillus RepID=C2HLE6_LACAC Length = 260 Score = 125 bits (313), Expect = 2e-27, Method: Composition-based stats. Identities = 49/269 (18%), Positives = 111/269 (41%), Gaps = 23/269 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + ++ + L ++DK + YLL P+ A LS +LA + VS+S++ + ++KLG Sbjct: 3 MDLETAVMKKKESLNETDKAIVSYLLKYPEDASKLSLMELAQKLYVSKSAIFRLSKKLGL 62 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK L+E + + + ++ ++ L + ++ T + Sbjct: 63 SGFSELKFELTE--LTNKKVQNKKYVQELDFNNNLHQIIDE-----------TFKYFKDA 109 Query: 121 KLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASS 178 H+ L +A I + G ++A+ A IG A + + ++ Sbjct: 110 NFHDLFIDLDNAETIYIYSTGWQQQIIAEYLAHSFFLIGKKAIILPSAKDEVAMLGRSIE 169 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRV-----GGKVLAITGFTPNALQQRASHCLYTIAE 233 +D+L IS+ G + +E+ ++ K +++T + P + + + + Sbjct: 170 ENDMLFVISFGGFNK---TIIEELKKIDTVTDKLKFVSLTSWQPGKIASLSDYSFFFKTT 226 Query: 234 EQATNSASISACHAQGMLTDLLFIALIQQ 262 ++ + + +L DL+ + Sbjct: 227 PFQISNQNAVTFSSAYVLIDLIINEYGKH 255 >UniRef50_A6W9S6 Transcriptional regulator, RpiR family n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W9S6_KINRD Length = 285 Score = 124 bits (312), Expect = 3e-27, Method: Composition-based stats. Identities = 42/283 (14%), Positives = 100/283 (35%), Gaps = 16/283 (5%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R+ + L +++++A ++L + D S +LA +G S+++V +F ++LG+ Sbjct: 12 VRERVDAAWPRLTPAERQVARFVLERADDLAGYSGAELAEASGASKATVSRFFRRLGFTS 71 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + + + SP D + + + T + + L Sbjct: 72 YAQAR--------TGARSPRARGVPTGGLPDSGGEPVAVHLAHDVENLTRTASALAAADL 123 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQASSPDD 181 T L ARR+++ G S VA + +L++ + A + + D Sbjct: 124 DAVTTALARARRVLVLGWRNSYPVALHLREQLVQARPDVAVGPLPGQTVAEELAGLDERD 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L+ + + ++ A +G + +T +H L E + Sbjct: 184 VLVVVGFRRRTPTVSAAVRLAADLGVPCVLLTDPAAAPPPVPVAHRLVVPVEGP----GA 239 Query: 242 ISACHAQGMLTDLLFIALIQQD---LELAPERIRHSEALVKKL 281 + A M +L ++ + + + +++L Sbjct: 240 FDSYAAVMMTVAVLAEGVLASRSGPGQDRTRAVAAAHDALREL 282 >UniRef50_A8FAT4 Transcriptional regulator n=2 Tax=Bacillus RepID=A8FAT4_BACP2 Length = 254 Score = 124 bits (312), Expect = 3e-27, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 100/272 (36%), Gaps = 21/272 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + + ++ L ++D + + + + + Q LA A S SS+ + A+K+G+ Sbjct: 1 MILDKLVNEYFEDLNKNDLHIIKTIHDHLEEMKTMKIQDLARYAHTSISSIHRLAKKIGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ LK + ++ + + L+K + T + Sbjct: 61 DGYSDLKSYVKLNHLTEEST-------------------QDLMKLLDQDISQTRKYMEQL 101 Query: 121 KLHECVTMLRSARRIILTGIGASGL-VAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 H+ ++ A I + G G + L +A + +L + + +R L + Sbjct: 102 DFHQLNQLIDRAPYIYIYGTGTAQLDLANDVQRQLWSLHKKSQVLRSKRDLTDGIIEFGE 161 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE-QATN 238 DDLL IS +G + L+ + K +++T N L Q A +Y + N Sbjct: 162 DDLLFIISLSGESKNLDEIIQLVKTRHIKFISMTTLRNNLLAQNAMFNIYVSSTPFPLYN 221 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPER 270 S+ ++ D++ + R Sbjct: 222 KVDNSSFLPFYIVVDMIVRKFSEWKWNQLNNR 253 >UniRef50_C1I6H5 Predicted protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I6H5_9CLOT Length = 253 Score = 124 bits (312), Expect = 3e-27, Method: Composition-based stats. Identities = 53/263 (20%), Positives = 106/263 (40%), Gaps = 10/263 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + I QS+ K+ + +L PD A + VS+S++++F QK GY Sbjct: 1 MNPIDNILLHNDEFTQSEIKIKNIILTNPDIIACFPLVTAAYKMNVSKSALLRFCQKCGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGF K LS L S S I++ +++I + N + Sbjct: 61 KGFSEFKYELSRYLHSGNLSNEKIINDSS----------QEIINLFIEKLTLLKESNLDN 110 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L + + +I + G+ +GL A++ ++L IG ++ ++ D + SS + Sbjct: 111 QLEALSEDILKSNKIKIYGVHETGLAARHLQYRLTTIGIDSESITDSSLIAEKALFSSQN 170 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL + S + + + + + + IT ++ + ++ + A +S Sbjct: 171 DLNIYFSLSALTSIIVESIKNSISNNSNIALITQNNKTKFSKQIPNIIFLPSFSLAKDSF 230 Query: 241 SISACHAQGMLTDLLFIALIQQD 263 I + + +LL L + Sbjct: 231 FIDSQALNFVFIELLINKLSKLL 253 >UniRef50_A9DTL4 Transcriptional regulator, RpiR family protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DTL4_9RHOB Length = 309 Score = 124 bits (312), Expect = 3e-27, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 92/270 (34%), Gaps = 5/270 (1%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L++++ ++A ++ D ++ LA AGVS+ +V +F ++LGY+ F A K A++ Sbjct: 21 NLSKAESEVALWVERNFDNLPFETAADLAVGAGVSEMTVSRFVRRLGYENFKAFKAAVNA 80 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 +I D + ++ A+ + + + + +++ A Sbjct: 81 EFRKSDSDEGSLRSRRIAIPDGTGSELDAQLQLELDAIVEVYRMAATPQWDAALDVVQKA 140 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASSPDDLLLAISYTGV 191 + + +TG A +FA +L ++ + Sbjct: 141 QHVNITGFQGVKGTAMDFATRLKYARPGVRFADGRSGNWSELFIEEPQTSCVIMVEVVPY 200 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGML 251 E A+ LR ++ +T ++ H L + + + L Sbjct: 201 AHEAVKVAELCLRRDVPLIMVTDQYSAWPRKYTPHVLSVATSTRTF----LDSTAGIAAL 256 Query: 252 TDLLFIALIQQDLELAPERIRHSEALVKKL 281 L + + A +R+R L Sbjct: 257 LGLFLSGITARVGAPAQDRLREMRELAAHF 286 >UniRef50_A0K0Z5 Transcriptional regulator, RpiR family n=3 Tax=Micrococcineae RepID=A0K0Z5_ARTS2 Length = 299 Score = 124 bits (311), Expect = 4e-27, Method: Composition-based stats. Identities = 53/269 (19%), Positives = 105/269 (39%), Gaps = 10/269 (3%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 L+++ ++ D + P + + ++A A V+ S+VV+ AQ LGY+G+P L+ L Sbjct: 35 LSKAQSRVVDVIARNPQLSSYADIAEIAQRADVNNSTVVRTAQHLGYRGWPDLQRELRSR 94 Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR 133 + + + R I + + TL+ N+ + + + +A+ Sbjct: 95 YLVM-----ISTEDTLTEHGEHRSPLHDAINHDIENLRLTLDSNTGDDAEAAIAAMAAAK 149 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQASSPDDLLLAISYTGVR 192 I G+G+ A A +G+ L ++ D+L+ I+ Sbjct: 150 SITAVGLGSFAGPASVMAHLGSTMGYPITLENRAGVHLASSTNTLGEGDVLVVINMWRSI 209 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLT 252 R++ + A+ + G V+AI+ L A H L +E + + A + Sbjct: 210 RQIIVTAEAAKQAGATVIAISDMRRGRLAAAADHLLVVASEGISF----FQSVTAANSVV 265 Query: 253 DLLFIALIQQDLELAPERIRHSEALVKKL 281 L + E + IR ++ L K L Sbjct: 266 YGLLAGMEAAHPERSRAAIRRTQQLWKDL 294 >UniRef50_A6X2Q6 Transcriptional regulator, RpiR family n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X2Q6_OCHA4 Length = 284 Score = 123 bits (310), Expect = 5e-27, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 101/280 (36%), Gaps = 8/280 (2%) Query: 1 MNGLLRIRQRYQGL--AQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 M+ + IR + L +++DK +A Y+ +++ +A G+SQ +V ++ ++L Sbjct: 1 MSKEILIRLQSAELRKSKADKLIASYIERNLAELPFETAKSIAERLGISQMTVGRYLRRL 60 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 G+ G LK AL S P +++ D + L+++ + + + Sbjct: 61 GFDGLEELKTALRRG-RSNPAWQVKGPVARLQQDFREGKLLAGLVQQQIENLGTVYELTT 119 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQAS 177 + E + L A + + +AQ FA +L + + + S Sbjct: 120 RPEWQETIDALIGASEVYVAAYQNVRGIAQYFASQLSYSRPGVSFMDGLNGTYAEVLDGS 179 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 + +L + A E R+G KV+ T + A L Sbjct: 180 RENRVLFLHDVRRFASKARPLAIEARRMGVKVILFTDEFCPWASEVADIALIVPGSHGPL 239 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + + + DL+ +I Q ER++ L Sbjct: 240 WDGAAT----MTAIMDLMLSHIIIQLGSQVDERVQSLTRL 275 >UniRef50_B7QTT1 Transcriptional regulator, rpir family n=2 Tax=Ruegeria RepID=B7QTT1_9RHOB Length = 276 Score = 123 bits (310), Expect = 5e-27, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 89/262 (33%), Gaps = 6/262 (2%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 + R+ + L + + A + + +A AGV+ S ++F Q G+ G+ Sbjct: 18 INRLDEIIGTLPKRMDQCATFTRRNLHLVAVSTVSDMAKAAGVAPSVYMRFCQVFGFGGY 77 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDD-PLRLVGEKLIKENTAAMYATLNVNSEEKL 122 ++ E S + D + + ++ + N + + L Sbjct: 78 SDMQALFREQYTSFRPDYEERLATLRSDQDHSSGQLLADFAEAGQKSLISLGNSVANDGL 137 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + L AR + L G + V N A+ L + + L+ SP+D Sbjct: 138 IKVAEGLSQARIVHLIGARRAFAVVSNMAYLLENLDVPTHLHTHVGH-LSNHHLVSPEDA 196 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 +LA+++ + A G V +T L + A+ L E A Sbjct: 197 MLAVTFAPFSQTTINDARIAAERGATVFGLTDSEKCPLFEFATETLVVREHE----VAGF 252 Query: 243 SACHAQGMLTDLLFIALIQQDL 264 + +A LT L + ++ Sbjct: 253 RSLNASLTLTTALSVLTAEKRK 274 >UniRef50_D1ARL0 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1ARL0_SEBTE Length = 251 Score = 123 bits (310), Expect = 6e-27, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 101/262 (38%), Gaps = 19/262 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + I + Y+ L +D + +Y+ P+T ++ L+ S +S+++ +KLG+ Sbjct: 1 MKLDVLINKYYEKLNSNDLYILNYIKNNPET-SDVNITLLSKMCNSSTASILRMTKKLGF 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ K L AS+ +++ + + Sbjct: 60 SGYSEFKYFLKSLTASKESQDLKTRL--------------EVLASDVEHTMKIFK--NNN 103 Query: 121 KLHECVTMLRSARRIILTGIG-ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 +L E +L +A+ I G G L+ Q F+ ++ G N + VQ Sbjct: 104 QLSETCDLLYNAKNIYAYGTGYGQKLMLQEFSRCMLNCGKNIIIIPAFTEFRIAVQNMKE 163 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT-IAEEQATN 238 D+++ S +G R++ + +L+IT F N L + + LY + + Sbjct: 164 SDMVIIASLSGNARDIAELIHILNLKNIPILSITNFNDNTLSKLTPYNLYYQSSNINTED 223 Query: 239 SASISACHAQGMLTDLLFIALI 260 S + S+ +L + ++ + Sbjct: 224 SLNNSSYVTLNLLLNFIYEGYM 245 >UniRef50_C3RH58 Predicted protein n=2 Tax=Bacteria RepID=C3RH58_9MOLU Length = 255 Score = 123 bits (309), Expect = 7e-27, Method: Composition-based stats. Identities = 41/263 (15%), Positives = 89/263 (33%), Gaps = 17/263 (6%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + ++ L + + + + LL D L+ LA VS +++ + +KL Y Sbjct: 3 MSLIKNFQKYGNNLTELEIECFNKLLTFRDLEPSLTISSLAETLNVSTTTIFRMVKKLDY 62 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 K F + L + E S + T+ + Sbjct: 63 KTFMDFRYDLLYHRRDEYEYQSPVESTC---------------DSLEKEIKDTIEMLRNL 107 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + + + A+ +++ G + VA+ A KL G D L + D Sbjct: 108 DIDDVIKDIVKAKSVLICSSGMNKYVAKILAVKLSLYGIRTIYPDDHWFLYLEANNLTQD 167 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D ++ +S G + G K+L +T + + + +++ + + Sbjct: 168 DFVIVLSRGGATEAIIDVMKNAKLSGCKILLVTETRNSPMTKLSNYVMNVSVTKDE--GY 225 Query: 241 SISACHAQGMLTDLLFIALIQQD 263 I + + + L L+ Q Sbjct: 226 DIDSRLHIHLAIEYLLRELMNQY 248 >UniRef50_O67500 Uncharacterized phosphosugar isomerase aq_1546 n=4 Tax=Bacteria RepID=Y1546_AQUAE Length = 322 Score = 123 bits (308), Expect = 9e-27, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 70/186 (37%), Gaps = 4/186 (2%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILT-GIGASGLVAQNFAW 152 L ++I+E + L+ E + V +LR+ ++ GIG SG +A+ + Sbjct: 5 DLLEFAREVIREEIKGLERLLSSLD-ENFSKAVEILRNCEGKVILTGIGKSGHIARKISS 63 Query: 153 KLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAI 212 L G + + AL + D L+AIS +G E+ + V+ I Sbjct: 64 TLSSTGTPSVFLHPAEALHGDMGLLDSKDALIAISNSGESTEVLYVLQYAKALNIPVIGI 123 Query: 213 TGFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDLELAPER 270 TG ++L + + L E N A + L D + + L++ + Sbjct: 124 TGNEKSSLAKYSDVVLKIPVDREACPFNLAPTVSSTVTLALGDAIAMTLMKLKGFSQEDF 183 Query: 271 IRHSEA 276 + A Sbjct: 184 AKRHPA 189 >UniRef50_C9A1P4 Transcriptional regulator n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A1P4_ENTGA Length = 254 Score = 123 bits (308), Expect = 9e-27, Method: Composition-based stats. Identities = 48/270 (17%), Positives = 103/270 (38%), Gaps = 23/270 (8%) Query: 1 MNG--LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 M+ + + + L ++D + Y+ A + LA + S+SS+ +FAQK+ Sbjct: 1 MSIKTEELVSKYFFDLNENDLAIWKYISNNKKEASESTLVNLAKKCNYSKSSIHRFAQKI 60 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 YKGF LK AL L + LI + + + ++N Sbjct: 61 SYKGFSELKYALKAELE-------------------AEDLEGNLIDQYVSIIANSMNEMK 101 Query: 119 EEKLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 +++S++++ + G G VAQ + + V + + + Sbjct: 102 YRDFSTIFQLIQSSKKVFIYGTGTLQRAVAQEMRRVFLAGDEHFYVVEGVDEIGSLTDTL 161 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 + +DL+ IS G + A ++ G + IT F+ N + ++ ++ E+ Sbjct: 162 TTEDLVFIISLRGRSDNAHSFAKDLKVKGVPFVVITSFSENQIAHFSNENIFVNLEQVPI 221 Query: 238 NSASISACH-AQGMLTDLLFIALIQQDLEL 266 + + +L +LF+ ++ + Sbjct: 222 GNWKKYSVLDPYFILVSILFLRYMEYKQKK 251 >UniRef50_C5D0V0 Transcriptional regulator, RpiR family n=1 Tax=Variovorax paradoxus S110 RepID=C5D0V0_VARPS Length = 288 Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 99/282 (35%), Gaps = 6/282 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + RI + +S++ LA YL ++ +A ++GVS +V +F + LGY Sbjct: 6 SLFERIEAASSEMTRSERLLAAYLTANARELTLENAASVARKSGVSPMTVGRFLRTLGYD 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F ++ S A + R P+ + + A+ A ++ + E Sbjct: 66 SFDEVRRETSRLSAPAELRIAGRFEQFSRSQGPVSDARSAQLTQQIDALVAAHDLATGEH 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR--DMHALLATVQASSP 179 + V + +++R+ + G VA +FA +L + + D S Sbjct: 126 WNAMVRQVATSQRVFVAGYQTVRGVASDFAARLEYVREGVKFLDGADGTYAELLGALKSQ 185 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 L+ + ++ A G V IT + + H + + Sbjct: 186 TRCLVLVDIRRYAKQAEALASAATEAGIPVFVITDAYCHWARTYTPHVFHVQTDVGFFWD 245 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + A +LL +I+Q + ER+ E L + Sbjct: 246 ----STVAIVGFINLLMNGVIEQLGKKVGERVSRLEKLQDRF 283 >UniRef50_B1R0N4 SIS domain protein n=2 Tax=Clostridium butyricum RepID=B1R0N4_CLOBU Length = 279 Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats. Identities = 46/269 (17%), Positives = 96/269 (35%), Gaps = 10/269 (3%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 +++K + D++L + + + ++ G+SQ +V +F +K+GY K A+ + Sbjct: 10 NFTKNEKIIYDFILSKKENLFLYTEIDISKMTGISQPTVSRFWRKIGYTNLKEFKEAVKD 69 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 + S P D + K++ + + + SE ++ V S Sbjct: 70 -----FHNQSSPSTKFKSILDSDEFYYKNYAKKSISLIEDSAEKISESDFNKAVEYFISC 124 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQ-ASSPDDLLLAISYTGV 191 +I GIG + + ++L + G N ++ LL D+L++ ++ Sbjct: 125 DKIFTHGIGPAESLCSLLNFRLNRFGLNIDSINPSGQLLYEDLINIDKDNLIVLFLFSHY 184 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGML 251 E ++ D + KV+ IT Y E + Sbjct: 185 HPETHVILDYATEINCKVIIITDILIKPFNNHNIITFYVSRGELLE----FHSLVGPLFF 240 Query: 252 TDLLFIALIQQDLELAPERIRHSEALVKK 280 + L +A+ E++ E L K Sbjct: 241 IESLIVAIGISKSNEPLEKLHKLEELRNK 269 >UniRef50_C9LT74 Arabinose 5-phosphate isomerase n=2 Tax=Bacteria RepID=C9LT74_9FIRM Length = 377 Score = 122 bits (306), Expect = 1e-26, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 81/203 (39%), Gaps = 3/203 (1%) Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 + + + + S Q D + + + AA+ EE Sbjct: 29 RAVYNREVDFLVDLQSNGKGEQRMKRDVIWEKAVETLSMEAAAVKKLTESVDEEFCRAVE 88 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 +L RI++TG+G SG V + A L G + + A + + D++LAI Sbjct: 89 CVLDCTARIVVTGMGKSGHVGRKIAATLASTGTPSFFMHPAEAFHGDLGMVTDKDVVLAI 148 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ--ATNSASISA 244 S +G +E+ + R+G ++A+TG + L + + + + E + A ++ Sbjct: 149 SNSGEVQEVVKILPVIHRIGATIIAMTGNRSSQLAEYSDYVIDIGHEPEACPLGLAPTTS 208 Query: 245 CHAQGMLTDLLFIALIQ-QDLEL 266 A + D + +A++ ++ + Sbjct: 209 TTATLAMGDAIAVAVMSVRNFKK 231 >UniRef50_A5LQQ9 Phosphosugar-binding transcriptional regulator, RpiR family protein n=3 Tax=Streptococcus pneumoniae RepID=A5LQQ9_STRPN Length = 203 Score = 122 bits (306), Expect = 1e-26, Method: Composition-based stats. Identities = 38/200 (19%), Positives = 84/200 (42%) Query: 81 PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGI 140 + I +++ + + +T + ++ + ++R A +I++ G+ Sbjct: 1 MTKDILELESQKMSSDTFIDEIKNNYLSIVESTRKLIDGRQIELAIKLIREANQILMIGV 60 Query: 141 GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAAD 200 G+SG A+ F L++IG + V D H L +DL++A S +G +E+ Sbjct: 61 GSSGNAAREFESSLLRIGIISKTVIDTHFQLMHTALLKDNDLIIAFSLSGSTKEVEETLL 120 Query: 201 EMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALI 260 R K+++IT ++ + + + L T +E S+ A +Q + D++ L Sbjct: 121 NAKRKNVKIISITNYSSRNIAKLSDCVLLTSKKESYLEGGSLMAKASQLFIIDVICTRLS 180 Query: 261 QQDLELAPERIRHSEALVKK 280 + E + +L+ Sbjct: 181 LINYEDTICKKEEIASLLSN 200 >UniRef50_C2HN51 Transcriptional regulator n=7 Tax=Lactobacillus RepID=C2HN51_LACAC Length = 270 Score = 121 bits (305), Expect = 2e-26, Method: Composition-based stats. Identities = 53/266 (19%), Positives = 95/266 (35%), Gaps = 22/266 (8%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + L S+K++ ++L P LS +LA + VS+S++ + +KLG Sbjct: 3 NLRSMVYNSGNKLNDSEKQIIQFVLNNPKDCSKLSLAKLAKKLYVSESAIFRLCKKLGLS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ LK L E S+ + + +E L + Sbjct: 63 GYSELKFDLVELAESRKKPIK---------------IENNFARELGKVNNDVLKYFKQRD 107 Query: 122 LHECVTMLRSARRIILTGIGASG-LVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASSP 179 + + A I + G L+AQ A +L +G A + L + + Sbjct: 108 FNSLYRDIDDAGTIYIYSTGWQQELIAQYLAHELFVVGKQATVLPSALDELKVAGRYAKK 167 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKV--LAITGFTPNALQQRASHCLYTIAEEQAT 237 D+L IS+TG + +N ++ V K ++ T N L + H +Y Sbjct: 168 GDVLFIISFTGDNKTINEEITKLELVNDKFRYVSFTNMMQNKLASLSQHNIYFPTIAFTD 227 Query: 238 NSASIS---ACHAQGMLTDLLFIALI 260 ++ + A L LL + Sbjct: 228 DADFKTGKVAFTPAYYLIGLLISEYV 253 >UniRef50_A4FJ87 Transcriptional regulator, RpiR family n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FJ87_SACEN Length = 276 Score = 121 bits (305), Expect = 2e-26, Method: Composition-based stats. Identities = 55/269 (20%), Positives = 98/269 (36%), Gaps = 19/269 (7%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 L + +++A YLL DTA +L+S +LA A VSQ SV +F LG+ G+ + L Sbjct: 12 HRLTPAQRRIAAYLLANVDTAAYLTSVELAEAAAVSQPSVTRFVALLGFDGYGHFRRYLR 71 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN-SEEKLHECVTMLR 130 +A D + I E+ + + L T+L Sbjct: 72 QA-----------GSEPAADQDARGSKLQSGIDEDMRNLARLRTELADDSALRTAGTVLA 120 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD---LLLAIS 187 S+ +++ G S +A F + KI + + +++ + + + Sbjct: 121 SSNPLVVLGFRVSAPLASLFGYLAAKIHPDVRLLISGGSIVGDQLRHARQCGADATIVFA 180 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHA 247 RE A + +G + + +T T +AL A L E+ + A Sbjct: 181 MPRYPRETQRAMVQARDLGLRTVLVTDRTVSALTPDADDVLAAAVGEELV----FDSHAA 236 Query: 248 QGMLTDLLFIALIQQDLELAPERIRHSEA 276 L+ L A+ A R+ + E Sbjct: 237 VMSLSTSLLEAMADAAGASARRRLENFEQ 265 >UniRef50_A5V7B7 Transcriptional regulator, RpiR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V7B7_SPHWW Length = 309 Score = 121 bits (305), Expect = 2e-26, Method: Composition-based stats. Identities = 49/276 (17%), Positives = 98/276 (35%), Gaps = 5/276 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L R++ G +++ +A +++ T +++ LA + GVS+ ++ +FA+KLG++ Sbjct: 20 LLRRLQAGLDGYTAAERAVAGHIVAHYGTLAFETAESLATKVGVSEITIGRFARKLGFRN 79 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F ALK L +A + + + A+ A + Sbjct: 80 FKALKNELKDATVQAMPWLIGEELAEFVESPGEPSDRDGNRQREMNALLAVYRLAETPGW 139 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSPDD 181 +L AR + + G +A A L + V + D Sbjct: 140 AAAARLLAQARTVQIAGFQTERGIATLLANHLQFMRDGVRLVDLGAGNYADIFATDTSDT 199 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L+ I R+ L A++ + G ++ +T + Q+ H L + S+ Sbjct: 200 CLVVIDIRRYSRQSYLVAEQASQQGIPLIVLTDLFCDWAQRFTPHVLAVPTQTGLFWSSP 259 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 A +LL +I+ +R+ L Sbjct: 260 ----VALVCAANLLVNDVIKLIGPGVEQRLEQLTRL 291 >UniRef50_C8S1A0 Transcriptional regulator, RpiR family n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1A0_9RHOB Length = 310 Score = 121 bits (304), Expect = 2e-26, Method: Composition-based stats. Identities = 47/282 (16%), Positives = 92/282 (32%), Gaps = 5/282 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + R+ +G +++ LA YLL ++ +A + GVS++SV +F + +GY+ Sbjct: 21 DLRQRLAAAAEGGTPAERALAHYLLSNLSVLPFETAAAVALKVGVSEASVGRFCRSIGYR 80 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 LK +L L + +H+ R + ++ AA+ A + + Sbjct: 81 HLKELKSSLQMDLGEKAWLIGDRLHDFHRRSREGGAELARALEHEIAALVAVYEIAASPA 140 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 V L + + G A A L + A + + P++ Sbjct: 141 FEATVKRLAHRNAVWVAGFQTERGHAAELAHNLQYLRPGVHLADASDGHFAEILLAEPEE 200 Query: 182 L-LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 + L+ I R A G V +T + + + Sbjct: 201 VTLVLIDGRRYSRLTRDLAMAAHDAGIPVTLVTDPYCDWAPGLVTEVFAVPTDLNHFWD- 259 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 A L L+ + ++ R+ AL L+ Sbjct: 260 ---TTSAMSSLIGLMVNGVFRELGAGVELRMARVSALYGDLI 298 >UniRef50_Q1QYR8 Transcriptional regulator, RpiR family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QYR8_CHRSD Length = 305 Score = 121 bits (304), Expect = 2e-26, Method: Composition-based stats. Identities = 58/275 (21%), Positives = 101/275 (36%), Gaps = 10/275 (3%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L+ L + LL QP+ S QLA GV S + + + LG +GF AL+ + Sbjct: 32 KLSAKGVALLEALLAQPEAVSLSSISQLAQRHGVHPSRLTRLSHALGLEGFKALQTLFRD 91 Query: 73 ALASQPESP---SVPIHNQIRGDDPLRLVGEK--LIKENTAAMYATLNVNSEEKLHECVT 127 L+ + + + L ++ + A + +L Sbjct: 92 DLSDSAFYSTRAQRLLEFGETPRAEGAELADDRMLWQQEMQNLSAAVEALDTAQLARAAV 151 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASSPDDLLLAI 186 ++ ARR+ + G+ AS A A+ L + V + DDL++ I Sbjct: 152 AIQRARRVHVVGLRASFGAAHYLAYYLDYLRDGVQLVSPQAGVSVEQALRLGEDDLVIGI 211 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 ++ R + G +LA+T + + L L A E A +S+ Sbjct: 212 AFRPESRMSVDYCRLAVEQGASLLALTNHSASQLAALTELTLLAPA-EGAFFFNPMSS-- 268 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ML +LL + + A +R EAL+ +L Sbjct: 269 -LFMLVELLLSRVARDMGHDAVLALRQREALISRL 302 >UniRef50_UPI00016C007A transcriptional regulator, RpiR family protein n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C007A Length = 255 Score = 121 bits (303), Expect = 3e-26, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 95/263 (36%), Gaps = 20/263 (7%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + Y L + + Y+ P+ + + + +A +S +S+++F +KLGY Sbjct: 4 NIINLNYDIYSKLTKLETDFLSYINQNPEFVIQNTIKDIGTDAFISPASIIRFCKKLGYS 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F + L ++P + +K+I+ LN K Sbjct: 64 SFSEFRYHLRTLFINKPNNLQN----------------KKIIEVINHQFNLYLNAIDISK 107 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + E V +L + I+L G G + A +L + + + RD Sbjct: 108 IIEIVPLLTQSN-ILLYGKGTNAYFIDYLATQLSLLNLSVLSYRDAQLAKVYASNIGQGG 166 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE---EQATN 238 + L + Y+G + A + K++ IT ++L A +CL E ++ Sbjct: 167 IALILCYSGETQVSIDLALSAKQNHYKIILITRNIQSSLASIADYCLLIPEEALNSYSSK 226 Query: 239 SASISACHAQGMLTDLLFIALIQ 261 + + L D+L +I Sbjct: 227 NIHVKTNFCLVCLMDILLQYIIS 249 >UniRef50_D2BP23 Transcriptional regulator, RpiR family n=3 Tax=Lactococcus lactis RepID=D2BP23_LACLK Length = 247 Score = 120 bits (302), Expect = 4e-26, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 94/258 (36%), Gaps = 16/258 (6%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 L + + +YL ++ Q+A A VS SS+++ +K + GF K Sbjct: 1 MNHLTSVEIYIWNYLEENKAKIIQMTVAQIAESAHVSPSSIIRTLKKKNFSGFSEYKNME 60 Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 + L + +++ EN + T+ + E L + V + Sbjct: 61 KQKLNRHDWIYGLTKD------------ANQVVSENIEELLMTVRLLESENLAKVVENIF 108 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 A +++ G S +A +FA L + A ++ + + + ++ +S +G Sbjct: 109 HAASVVIISRGLSVRIADSFARDLQFLDVKAVSLYQDNMQAYLEK-LPRNTFVIGLSLSG 167 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS-ASISACHAQG 249 + A + R G KVLAITG + L +++ L + + + Sbjct: 168 ETDLIVATAQKAKRDGKKVLAITGNYKSRLVEQSDLLLLAYQKNLSGKILVDYNNMLPLE 227 Query: 250 MLTDLLFIALIQQDLELA 267 ++ LL + + Sbjct: 228 LIIHLLIQLY--KQYKEY 243 >UniRef50_UPI000196AB3E hypothetical protein CATMIT_01164 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196AB3E Length = 242 Score = 120 bits (302), Expect = 4e-26, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 90/254 (35%), Gaps = 21/254 (8%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 + L+ + + +Y++ H+ L+ + VS S + + A+KLGYKGF K Sbjct: 5 DQMNQLSDLELDIYNYIISHRHEVIHMKLIDLSTDLHVSSSMITRVAKKLGYKGFLEWKA 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 + +P ++ + + + K + +H+ + Sbjct: 65 EMKLDQEDKPIQNKRALNYILDYFNRVD---NKEFD---------------DLIHQTAEI 106 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + ++ +I +GIG S +A+ A + G D + +D L + Sbjct: 107 IVNSHEVICSGIGLSDAIAKFAASLFNRKGKRTMYSGDFSS--RFRGMYDQNDCALFFTV 164 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS-ASISACHA 247 +G RE+ ++ + K++ IT + + + L + S + Sbjct: 165 SGETREIIDRIKDLKKYDIKIIVITNSASSTAAKMSDLALTYYMPSTKNSDFYSSATQVP 224 Query: 248 QGMLTDLLFIALIQ 261 + + + I+ Sbjct: 225 VLYIIESIANLFIE 238 >UniRef50_C5J6W4 Transcriptional regulator n=1 Tax=Mycoplasma conjunctivae HRC/581 RepID=C5J6W4_MYCCR Length = 278 Score = 120 bits (302), Expect = 4e-26, Method: Composition-based stats. Identities = 51/274 (18%), Positives = 111/274 (40%), Gaps = 9/274 (3%) Query: 8 RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALK 67 +++ + L +++++ D L P + S ++LA ++ VS S + +KLG+ ++ Sbjct: 8 QKQIESLTTAERQIIDLSLKNPVFFYNASIKELAKKSNVSMSVISLLTKKLGFDSLKNMQ 67 Query: 68 LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 + + + + + ++L ++ T ++ + + Sbjct: 68 FYV-------YHHYLNSKNILLDSNSENSKILDQLHFYYRDSITKTAHLIDLNSISKISE 120 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAIS 187 + +A +I L G G+S L A A L K+G NA + D H+ L T + + ++ S Sbjct: 121 TISNANKIFLYGAGSSSLAASELAINLQKLGLNATSFFDFHSFLLTSGQ-NQESTIILFS 179 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHA 247 + +E+ ++ G ++ IT + Q + L EQ SIS+ Sbjct: 180 KSCKTKEIEFIIKQLGDKGENLIIITANKQ-VIHQEKNQVLIYQTLEQKQRFISISSKVN 238 Query: 248 QGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 Q ++DL+F L ++ + L+ Sbjct: 239 QYFVSDLIFFILANSMDIKYQQKYEQNYFLLNNW 272 >UniRef50_C7RFE2 Transcriptional regulator, RpiR family n=1 Tax=Anaerococcus prevotii DSM 20548 RepID=C7RFE2_ANAPD Length = 243 Score = 120 bits (302), Expect = 4e-26, Method: Composition-based stats. Identities = 59/260 (22%), Positives = 103/260 (39%), Gaps = 26/260 (10%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + I + L++S+ + D + H++ L+ VS S++ +FAQKLG+ G Sbjct: 9 IMDIISSKNIKLSKSENIIVDKIKDINVDFSHININDLSEILKVSNSTITRFAQKLGFDG 68 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK +S+ + + I A TL+ Sbjct: 69 FSELKFDISKKPRRTKSL--------------SQEIYINFINSIEAFDEKTLSFI----- 109 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF-NAAAVRDMHALLATVQASSPDD 181 S RI + GIG+SGL A F +K +IG N ++ +++ ++ D Sbjct: 110 ----KSFDSFGRIAVIGIGSSGLCANEFVYKFGEIGLNNTDYAKEPYSINLLTKSLDAKD 165 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 LL+AIS +G L +LAITG + L+ A++ + + S Sbjct: 166 LLIAISLSGENNNLLEGVRFAKDKNANILAITGNNESTLKNIATNTILLP--PYPSYSYK 223 Query: 242 ISACHAQGMLTDLLFIALIQ 261 IS ++ D++ A + Sbjct: 224 ISKIFPVTLILDMICEAYLS 243 >UniRef50_C9XKC3 RpiR-family transcriptional regulator n=4 Tax=Clostridium difficile RepID=C9XKC3_CLODC Length = 249 Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 96/269 (35%), Gaps = 24/269 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + Q Y L ++DK + +L+ R+ S +++ANE VS++++++ +K+G Sbjct: 1 MRLESLVNQSYNSLNENDKIIIKQILICQREYRNFSCEKIANECNVSRATLLRLCRKIGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F LK L + + + +N + Sbjct: 61 DSFSDLKYLLKNNQLEFVNNDNN-------------------FHDVCENYRLLMNELQKI 101 Query: 121 KLHECVTMLRSARRIILTGIGASG-LVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + ++ A I + G G +AQ + +G + D+ + ++ Sbjct: 102 SFQDICKIIYDAETIYIYGTGNEQKSLAQEIKRIFLSVGKCVIDLFDIGEIEFMRESFQK 161 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DL + IS +G + A + +++T N + + LY + + Sbjct: 162 SDLFIIISLSGETKSGIEIAKFI-NNHIHTISLTRLDNNTIATLCEYNLYVETQ-KLDTL 219 Query: 240 ASISACH--AQGMLTDLLFIALIQQDLEL 266 +IS A L DLL + I+ Sbjct: 220 QAISYEVVGAFYALLDLLHMNYIEYRRRK 248 >UniRef50_A1A2Z7 Putative RpiR-family transcriptional regulatory protein n=2 Tax=Bifidobacterium adolescentis RepID=A1A2Z7_BIFAA Length = 295 Score = 120 bits (301), Expect = 5e-26, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 103/286 (36%), Gaps = 19/286 (6%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + RIR+ + L ++++ A ++L +S +L+ +G+SQ ++ + +KLGY Sbjct: 20 LVARIRESFDSLTATEREAAQFILGHLTDVLVCNSVELSQLSGISQPTLSRLYRKLGYAN 79 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + + P ++ + ++ + ++ T +L Sbjct: 80 AGEFRRDVRR--------VHRPGSPELSRHTQCDDLVADHLRRDEESLKRTFEGIDRAQL 131 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSPDD 181 + +A + + G +S VA + +LM++ N + + + + + D Sbjct: 132 SSACQAMATAPHVAVVGYHSSYPVALHMREQLMRLRGNVDILPNPGQSIAEDLVDYAAGD 191 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++ I + D ML G V+ I + + A + +S Sbjct: 192 VIVIIGVGRRLPFFSRLIDVMLERGLTVVVIGDIS----ARNAVIGRNVAFFKVVLSSHV 247 Query: 242 ISACHAQGMLTDLLFIAL---IQQDLELAPERIRHSE---ALVKKL 281 +++ A L L+ + + + RI + +L Sbjct: 248 LTSFTAAFALIALMVDEVGKCLVDTEDEVHARIEGINDCFDALNEL 293 >UniRef50_UPI000196AA29 hypothetical protein CATMIT_01879 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196AA29 Length = 279 Score = 120 bits (300), Expect = 7e-26, Method: Composition-based stats. Identities = 30/239 (12%), Positives = 87/239 (36%), Gaps = 1/239 (0%) Query: 21 LADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPES 80 +A +L + +S LA S +++ +F + L + F K ++ AL + Sbjct: 33 IAKTILTHLEQIPSISINDLAELCYTSPATISRFCKDLNCRNFATFKKEMAIALEIAHDE 92 Query: 81 PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGI 140 + + + + +K+ + ++ + + ++ A + + G Sbjct: 93 IHFSFDDDFKIKKNPQYLVDKVYDDTKKSLELGQQQLDINDVDKICELIHDAPHVFMIGY 152 Query: 141 GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAAD 200 S + Q+F K++K+ A + + + +DL++ ++ + ++ Sbjct: 153 QFSRIACQDFQLKMLKLEKFLYAFANRGDEVQKLDLIEENDLVIIVTVRARKELIDSLIT 212 Query: 201 EMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIAL 259 + + ++L +T + + EE +SIS +++++ Sbjct: 213 RIKKQKARILIVTMNKDYT-NPEVDYYYHLNGEESDYTQSSISGFIDTVSFFNVVYLRY 270 >UniRef50_C7TGE4 Transcriptional regulator, RpiR family n=4 Tax=Lactobacillus RepID=C7TGE4_LACRL Length = 270 Score = 120 bits (300), Expect = 7e-26, Method: Composition-based stats. Identities = 57/277 (20%), Positives = 105/277 (37%), Gaps = 23/277 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I Q+Y L QSDK++ +++ + R+ S ++A ++ S+S++ + QK+G Sbjct: 1 MQLESLINQKYTSLNQSDKEILTFIVKNREFVRNSSLSEVAAKSLFSKSAIFRCCQKIGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF L+ L+E S D L V + + +M T+N Sbjct: 61 TGFSQLRYVLAEEQESDQ--------------DSLSNV--DYLAQTVKSMLWTVNQFKST 104 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWK-LMKIGFNAAAVRDMH-ALLATVQASS 178 + L +A I + G + + L IG A H + + Sbjct: 105 NVEGIYATLENAGTIYIYSTGWQQQIMAQQLQRDLYLIGKFAFLFPTGHDEMQLSSTKIK 164 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P D+++ ISY G+ + + + G ++++ T F N L Q A++ LY + Sbjct: 165 PGDVVIVISYKGMNATIVQLVNNLKLNGVQIVSFTSFRQNRLAQAANYNLYYDVINKTIG 224 Query: 239 ----SASISACHAQGM-LTDLLFIALIQQDLELAPER 270 A + + + F + E E Sbjct: 225 ADKKVERFFANLTLLIDIFSMGFANYLAAQEERTREH 261 >UniRef50_C6JMB7 Polysialic acid capsule expression protein kpsF n=2 Tax=Fusobacterium RepID=C6JMB7_FUSVA Length = 324 Score = 120 bits (300), Expect = 8e-26, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 81/177 (45%), Gaps = 2/177 (1%) Query: 89 IRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQ 148 + + + +++ + + + E + +L+S ++++TGIG SGL+ + Sbjct: 1 MTKEMDIINYAKEVFDSEIEELKIVRDKINREIIEVVEEILKSEGKVVVTGIGKSGLIGK 60 Query: 149 NFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGK 208 A L G ++ + L + S +D+++AIS +G E+ + ++G K Sbjct: 61 KIAATLASTGTHSVFMNSAEGLHGDLGMISKEDVVIAISNSGNSDEIVAILPSIKKIGAK 120 Query: 209 VLAITGFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQD 263 ++A+TG + L + A + L E N A +S+ + ++ D L LI++ Sbjct: 121 IVAMTGNRNSKLGREADYILNIGVKREGCPLNLAPMSSTTSTLVMGDALAAILIKKR 177 >UniRef50_D2BNU6 Transcriptional regulator, RpiR family n=4 Tax=Lactococcus lactis RepID=D2BNU6_LACLK Length = 243 Score = 120 bits (300), Expect = 8e-26, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 103/263 (39%), Gaps = 26/263 (9%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + +Q L +++ YL D ++ + +A EA V SSV++ K+GY Sbjct: 2 MSFFGNVD--FQKLTYTERTCYSYLRDNVDKIPYMRVRDIALEAHVGTSSVMRLIHKMGY 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + K + + + S + I + + + + Sbjct: 60 DSYTDFKEYIIDKKELEKGSSNTAIPFSLD-----------IFSNDIE-----------Q 97 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L + + II TG+G+SGL+ A +L +G N + D+ +A+ ++ + Sbjct: 98 RLDNLAHRVIESDNIIFTGVGSSGLICDYAARRLAGVGINTFSFSDVTYPIASKLQNTTN 157 Query: 181 DLLLAISYTGVRRELNLAADEMLRVG-GKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 L++A+S +G E+ + + IT +++ + + L E N+ Sbjct: 158 TLVIALSISGETNEIIEVLTSLRSNKDVYISCITPKLNSSIAELSDFVLTYRINEHRINT 217 Query: 240 -ASISACHAQGMLTDLLFIALIQ 261 +++ LT+ L + Q Sbjct: 218 HYDLTSQLPTVYLTERLTDLVYQ 240 >UniRef50_Q4A886 Transcriptional regulator n=5 Tax=Mycoplasma hyopneumoniae RepID=Q4A886_MYCH7 Length = 271 Score = 120 bits (300), Expect = 8e-26, Method: Composition-based stats. Identities = 50/281 (17%), Positives = 110/281 (39%), Gaps = 16/281 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L I + + L +K + ++ +P + +LA +S ++ + +KLG+ Sbjct: 1 MSVLT-ISKNF-KLTHIEKLIIRFIETKPRKFVEQTINELAATLFISVGTITQLTKKLGF 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F LK + E L ++ ++QI E + ++ TL + + Sbjct: 59 NNFKELKKFVIEWLKLDEDNNLYNENDQI----------ENINLLYVHSIEKTLAILNVS 108 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +++ V + +II G +S VA F+ L + N+ +++ + + + Sbjct: 109 QINRIVDTILKMDKIITYGTASSITVATEFSNNLRNLHLNSLCAKNISDIASWIGNPGST 168 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRA-SHCLYTIAEEQATNS 239 L++ S + R+ + + IT T L++ + S +Y EQ N Sbjct: 169 CLVI-FSVSMASRDAVALTKLAKQHQINTIFITSNTN--LEKNSFSEVVYFDTLEQNNNI 225 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + +Q + DL+ + + ++ E L K Sbjct: 226 FPVGSKVSQLFIGDLISLKIRKKLNSSRSEFFNEFRRLWYK 266 >UniRef50_Q0C3E7 Sugar isomerase, KpsF/GutQ family n=2 Tax=Alphaproteobacteria RepID=Q0C3E7_HYPNA Length = 342 Score = 119 bits (299), Expect = 9e-26, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 63/178 (35%), Gaps = 2/178 (1%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWK 153 + +I+ A+ T+L + R +I+ G+G SG + Q A Sbjct: 26 SDLDLARNVIRTERNALEKLEQTLGPSLEEAVSTILATDRHVIVAGVGKSGHIGQKIAAS 85 Query: 154 LMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 L G + + A + P +++AISY+G REL ++A+T Sbjct: 86 LASTGTPSFFLHPTEASHGDLGMIVPGSVVIAISYSGESRELIDLLRYCKSNAIPLIAMT 145 Query: 214 GFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDLELAPE 269 + L + A L E A S+ L D L I L+ + + Sbjct: 146 RARESTLGRYADVLLELPTVPEACPNGLAPTSSTTMALALGDALTIVLMARRGFSTED 203 >UniRef50_C9A505 Transcriptional regulator n=4 Tax=Enterococcus RepID=C9A505_ENTCA Length = 258 Score = 119 bits (299), Expect = 9e-26, Method: Composition-based stats. Identities = 42/268 (15%), Positives = 94/268 (35%), Gaps = 29/268 (10%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + I+ + L ++ ++ DYLL L +++A S +++V+ AQKLG+ Sbjct: 13 MDLNVLIKGK--KLTDNELQILDYLLANTAAIDGLPLREIAKAIYTSPATIVRLAQKLGF 70 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ L L L +Q + + + + + + + Sbjct: 71 SGYLELLYFLKNRLKNQTITEAAIDYQIDAT--SIADTIDAIKEIYGRN----------- 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + I + G SG+VA+ K++ G V + Sbjct: 118 ----------KDKFITIYATGFSGIVAEYLHKKMLVNGIKTLLVSASDSGGIISNNIENI 167 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +L+ IS +G +++ + G + Q A+ +E+ ++ Sbjct: 168 SMLITISKSGETQKVLEKMALANEHHIPTVLFCGNGDHRANQLATFSFEV-TDERPYDTQ 226 Query: 241 SI--SACHA-QGMLTDLLFIALIQQDLE 265 +I ++ +L + + A + E Sbjct: 227 NIQYTSFFGKLLLLMEYIVDAFTHVEKE 254 >UniRef50_Q03C42 Transcriptional regulator n=1 Tax=Lactobacillus casei ATCC 334 RepID=Q03C42_LACC3 Length = 270 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 101/267 (37%), Gaps = 20/267 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I Q+Y L Q++K++ +++ D R S ++A ++ S+S++ + +K+G Sbjct: 1 MKLESLINQKYSNLNQTEKEILAFIIENRDFVRKASLSEVAEKSLFSKSAIFRCCKKIGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF L+ L++ S+ D L V + + +M T+N Sbjct: 61 TGFSQLRYVLTDEKDSEQ--------------DSLISV--DYLAQTVKSMLWTVNQFKST 104 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWK-LMKIGFNAAAVRDMH-ALLATVQASS 178 + L +A I + G + + L IG A H + + Sbjct: 105 NADDIYATLAAAGTIYIYSTGWQQQIMAQQLQRDLYLIGKFAFVFPTGHDEMQLSSTKIK 164 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P D ++ ISY G+ + + + G ++++ T F N L Q A+ LY + Sbjct: 165 PGDAVIVISYKGMNATIVQLVNNLKLNGVRIVSFTSFRQNRLAQAANFNLYYDIINKTVG 224 Query: 239 SASISACH--AQGMLTDLLFIALIQQD 263 + +L D+ + Sbjct: 225 IERKTERFFANLTLLIDIFSMGFANYL 251 >UniRef50_A8LRZ7 Transcriptional regulator n=2 Tax=Rhodobacterales RepID=A8LRZ7_DINSH Length = 281 Score = 119 bits (298), Expect = 1e-25, Method: Composition-based stats. Identities = 40/280 (14%), Positives = 95/280 (33%), Gaps = 11/280 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L R+ L S++KLA+ +L P ++ ++A A VS ++V +F +++GY Sbjct: 9 FLARVSDALPDLHPSERKLAELVLDFPGEMAGYTATEIAELANVSNATVSRFVRRIGYGS 68 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F + A+ + + + G + + + + T + + Sbjct: 69 FDEARRAVRDEQQAGTALLRMSADTPQSGGA-----VARHLMASQQNLELTYGGLDDTVI 123 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSPDD 181 + +A R+ G A AQ W+ ++ + L + + D Sbjct: 124 DYLAEAMIAAPRVWFVGFRAGQSFAQYLGWQCSQVLPLVTVLPRAGETLAESFASLDARD 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++ ++ + A+ + G + + L A L + A Sbjct: 184 VVFLVALRRKPKLTQAVAEATKQAGAALAVLADGPTPDLAG-ADWHLTSATSTT----AP 238 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + + +L+ +I+ R+ E ++ Sbjct: 239 LMNHVSSMAVCNLIGARIIELSGAAGRARMAAIEESHRRF 278 >UniRef50_A9EFQ3 SIS domain protein n=2 Tax=Rhodobacteraceae RepID=A9EFQ3_9RHOB Length = 282 Score = 119 bits (298), Expect = 1e-25, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 79/251 (31%), Gaps = 6/251 (2%) Query: 32 ARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRG 91 ++ +A VS+++V +F + +GY F LK L + P S + + Sbjct: 8 LPFETAASIARSVKVSEATVGRFCRSIGYDSFRDLKDHLKHDMGDDPWLMSDRLQEMRKD 67 Query: 92 DDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFA 151 + ++ AA+ + + + + L + + G +AQ FA Sbjct: 68 GGVDSAQLNQGLQLEIAALVGIYELANSAEWQQEAERLAQTAHVFVAGFQTERGLAQYFA 127 Query: 152 WKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLA 211 ++ + + A + + L+ A+E G V Sbjct: 128 NQMQYVRDGVTLIDLAAGNFAEILLTDRPAHLVIFEARRYSVLAKSLAEEARAAGVTVTL 187 Query: 212 ITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGM-LTDLLFIALIQQDLELAPER 270 IT + + A + + AQ L++LL ++ Q R Sbjct: 188 ITDVFCDWGHEAADQVFAVPTQFNQFWDS-----TAQMASLSNLLIHSVFLQLGSEVEGR 242 Query: 271 IRHSEALVKKL 281 + L + Sbjct: 243 LNRIADLYGRF 253 >UniRef50_A8U5R1 RpiR-family transcriptional regulator n=2 Tax=Bacilli RepID=A8U5R1_9LACT Length = 256 Score = 119 bits (298), Expect = 1e-25, Method: Composition-based stats. Identities = 39/271 (14%), Positives = 92/271 (33%), Gaps = 18/271 (6%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + ++ Q L++ D K+ Y++ D + +A + S S++++ ++KLGY Sbjct: 1 MKDISKLIQGK-KLSELDIKVLHYIIENIDDVLDKGVRGVAKDNYTSPSTIIRLSKKLGY 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF L L + + E ++ + + + + Sbjct: 60 TGFIDLYYQLLPMVKRTVGQQTDND--------------EDFLRISQQDFFKENSREDID 105 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + V L+ + I + G S ++A+ KL+ +G ++ Sbjct: 106 QFIRQVLYLKQ-KYIFIYATGFSAIMAEYLYKKLLVLGKKTVIATGTDSIGVFENNLEDI 164 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 + IS +G +++ G + T T N + A + + Sbjct: 165 GAFIVISKSGETQQVIDKLLVAKDQGIFTITFTKETSNRAAELADLNFKLTDNNKLDDRN 224 Query: 241 SI-SACHA-QGMLTDLLFIALIQQDLELAPE 269 + ++ ML + +F + + + Sbjct: 225 MLPNSFFPRLLMLVEYIFKMYLDGLQKEIAD 255 >UniRef50_Q15U63 Transcriptional regulator, RpiR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15U63_PSEA6 Length = 272 Score = 119 bits (298), Expect = 1e-25, Method: Composition-based stats. Identities = 51/282 (18%), Positives = 105/282 (37%), Gaps = 24/282 (8%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + RI Q+YQGL+ + + +AD+L P S Q+A + S+++V +F ++LGY Sbjct: 6 FIERIEQQYQGLSPNARLIADHLQHTPLDVLSCSVAQIAEKTQTSKATVSRFFRQLGYDS 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 K L+ A+ + + T + + +L Sbjct: 66 HHDAKQELNTFRANGYPMYMESDQGGA-------------LNREIQRIEQTWSNLDQTQL 112 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATV-QASSPDD 181 + + + A RI L G S VA +F +L++I + L+ + S D+ Sbjct: 113 NGLIQSICQASRITLIGFRNSYPVALHFRQQLLQIRSKVRLLPQPGQTLSEELRDISEDE 172 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHC--LYTIAEEQATNS 239 L++ + + + D++ +A+ + A L Q Sbjct: 173 LVILVGFRRRPKIFKPLLDKIQHHN---VALLADPSGQI--YADQVKQLIIC---QLGQE 224 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++ + A + ++ + + A RI +L ++L Sbjct: 225 QALDSYAAPMSVISIICNQVFTLLDKTADRRISEISSLYEEL 266 >UniRef50_C9N979 Transcriptional regulator, RpiR family n=2 Tax=Streptomyces RepID=C9N979_9ACTO Length = 282 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 106/278 (38%), Gaps = 19/278 (6%) Query: 5 LRIRQRYQ--GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R+++ ++ L + +++A ++ + A LSS +LA AGVSQ SV +FA LG+ G Sbjct: 8 ARLQRLFEGQRLTPTQRRIAHSMVRRAADAPFLSSVELAELAGVSQPSVTRFAVALGFDG 67 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN-SEEK 121 +PAL+ L E S + G + ++ ++ + + Sbjct: 68 YPALRKHLRE--------VSPADAAAVDGVEDTFNEYQQAVRAEIENLRQLSELLADPAP 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD- 180 + +L ++R +++ G+ A+ A+ F + K+ + V + ++L ++ Sbjct: 120 VERAGRLLAASRPLLVLGLRAASSQARGFGYFAAKVHPDVRVVDEGGSMLHDRVDAARRA 179 Query: 181 --DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 L+ + RE+ A G V+ + + + + Sbjct: 180 GASALMCFALPRHPREVVDALAYAREQGLTVVTVADSAFAPVAAHSDVLIPAAVGTGLAF 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + + +L + + L A R+ +A Sbjct: 240 DTACAPMLMGRVLLEAMCDGL-----PEAQARLEEFDA 272 >UniRef50_B4RJ65 KpsF n=58 Tax=Bacteria RepID=B4RJ65_NEIG2 Length = 326 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 65/177 (36%), Gaps = 2/177 (1%) Query: 89 IRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQ 148 + ++ +++ + E + +L R+++TG+G SG + + Sbjct: 3 MAENEKYLDWAREVLHTEAEGLREIAAELDENFVLAADALLHCKGRVVITGMGKSGHIGR 62 Query: 149 NFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGK 208 A + G A V A + +D++ AIS +G E+ + R Sbjct: 63 KMAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVAAISNSGESDEITAIIPALKRKDIT 122 Query: 209 VLAITGFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQD 263 ++ IT + + + A + ++ A ++ A L D L + L++ Sbjct: 123 LVCITARPDSTMARHADIHITASVSQEACPLGLAPTTSTTAVMALGDALAVVLLRAR 179 >UniRef50_C8P353 Putative uncharacterized protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P353_ERYRH Length = 256 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 51/277 (18%), Positives = 97/277 (35%), Gaps = 24/277 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARH--LSSQQLANEAGVSQSSVVKFAQKL 58 M+ +I L +K+L LL ++ + + + +A+ VS++SV +F +KL Sbjct: 1 MSLQKQISIHIHSLTFMEKELLRNLLDNFESFEYRYFTIENIADRFNVSKTSVHRFTKKL 60 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 GY F K + I + T + + Sbjct: 61 GYDSFTYFKDDFFGRVVQDEVFAYTRIP-------------------YVDMLTHTYELAT 101 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLAT-VQAS 177 + + V + +++RI + G+G S + + F KL G A D + + Sbjct: 102 KTITDDIVKKMINSKRITIYGMGMSNFLGKMFQIKLQLYGKTAEQYDDSRFMRLSARALV 161 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 +D+L +S +G E+ A E ++ IT + + A+H + T + Sbjct: 162 PKEDVLFVLSRSGRPPEIVEAVVEANLRKIDIILITEVPDSPIGMMATHIIQTSQSKDLD 221 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 N I + DLL I+ + Sbjct: 222 N--DIDTRLNAHIAMDLLMARFIEFREKEEVSNEEKY 256 >UniRef50_Q0FJM2 Putative uncharacterized protein n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FJM2_9RHOB Length = 274 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 55/280 (19%), Positives = 108/280 (38%), Gaps = 11/280 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L R+R + L +++ KL +LL P +Q+LA GVS+++V +F ++LG++ Sbjct: 2 FLARVRAQLPDLHRAEYKLGCFLLEFPGDLASYDAQELARLCGVSKATVSRFVRRLGFEN 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + A A + + + I + R + E + ++ + T + L Sbjct: 62 Y----DAARRAARDERQQCNGQISVRPRLRTGTTEISETV-RDEIDNLIWTYQQVDTDDL 116 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL-ATVQASSPDD 181 + S+RR+ L G + A +L+++ A++ L V +PDD Sbjct: 117 ESLADAVVSSRRVWLVGFRLCRVFADYLQTQLVQVAPTCASIPQPGVSLGEYVTEIAPDD 176 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++ ++ DE+ R G +A+ G L E Sbjct: 177 LVICMALGRREGRTEALLDELRRSGVP-IALIGDEEAGLAAGVRWQFRCRTETSEAQE-- 233 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + A L + Q+ +A R+R + + +L Sbjct: 234 --SHAAVLSLCSQIGARATQRAGAIARSRLRRIDEVNARL 271 >UniRef50_UPI000196ADBA hypothetical protein CATMIT_01190 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196ADBA Length = 252 Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats. Identities = 52/260 (20%), Positives = 103/260 (39%), Gaps = 19/260 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + Y L+ ++K + Y+ + +LA S+SSV++ AQKLGY Sbjct: 3 MDFDTQAGLIYSTLSDNEKDMIQYIRNHKSDVVEMPINELAKVLLSSKSSVLRLAQKLGY 62 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ LK +L + + + P+ L+++ + T S+ Sbjct: 63 TGYSELKYSLKKDIVKKAVVPT------------------DLVEKFRKEIDKTFEYASQV 104 Query: 121 KLHECVTMLRSARRIILTGIGASG-LVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++ + AR++IL G + + F+ +L G + V + + Sbjct: 105 NFATLISEIHKARQVILYATGFTQNNYTKQFSSELFMSGRSNYIVSGETNFEVISHSLTS 164 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD ++ IS +G + +E+ +L+IT N L + + + LY E Sbjct: 165 DDFVIIISLSGNTPGIRTIVNELNMKDIPILSITELGKNFLVENSDYQLYYNTTEFPLED 224 Query: 240 ASISACHAQGMLTDLLFIAL 259 I + +A G++ +L Sbjct: 225 EHIISMNAVGIILTILARKY 244 >UniRef50_Q03HM4 Transcriptional regulator n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03HM4_PEDPA Length = 193 Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats. Identities = 41/200 (20%), Positives = 80/200 (40%), Gaps = 8/200 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + + L ++++ L DY++ + ++ S +++A E VS ++ ++F +K+G+ Sbjct: 1 MNFFDIVEPHLKMLTKNEQVLFDYVVSNMNKIKNQSIREVAGETYVSTATFLRFVKKIGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF + + ++ + P ++ D + +I+ V + Sbjct: 61 AGFSEFTTVIKYTVLNENTKKTEPTPFEVSQTDYREEYLKNIIESV--------RVIPIK 112 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 KLHE L I L G S A+ + GFN RD + P+ Sbjct: 113 KLHEITKKLSDHPTIYLFSKGVSKYAAEYVYYIYTMAGFNVKYPRDYDFRQIASKQVKPN 172 Query: 181 DLLLAISYTGVRRELNLAAD 200 DL+ ++Y G E Sbjct: 173 DLVFILTYNGKNLEFVEMIK 192 >UniRef50_Q0FH55 Sugar isomerase (SIS) n=2 Tax=Rhodobacteraceae RepID=Q0FH55_9RHOB Length = 285 Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats. Identities = 57/280 (20%), Positives = 101/280 (36%), Gaps = 12/280 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R+ + Y L ++++AD LL P L++ +LA AGVS ++V +F ++LGY+ Sbjct: 13 ISRRVHEAYGSLPDGERRIADVLLGNPGELAMLTATELAAAAGVSNATVSRFFRRLGYES 72 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F K + + + L++ + +TL + L Sbjct: 73 FEQAKRQARRLRETGSPLYTGSATPASKR-------ISDLLQSEVTVLESTLTRLNPVTL 125 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAA-AVRDMHALLATVQASSPDD 181 E V + +A RI G S +AQ +L +I + + + D Sbjct: 126 REIVEAMATAPRIRTLGYRNSHFLAQYVTAQLGQIRRAVSPLLLPGQTQAEGIALMDKGD 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L + I E+ R G ++L IT T A+ + E + A Sbjct: 186 LAVVIGLRRRPAGFTSVVQEISRRGARILLITDKTIREAPAHATWTIDCQVETAQYSDA- 244 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + LL + + E + EAL ++L Sbjct: 245 ---YSGALAVLRLLAVETRRALGEAGQTYLEEVEALRERL 281 >UniRef50_B1IED4 SIS domain protein n=10 Tax=Clostridium RepID=B1IED4_CLOBK Length = 253 Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 107/267 (40%), Gaps = 25/267 (9%) Query: 1 MNG-LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M + +I +Y L++ ++ + Y++ D + + + +A E S +++V A+K+G Sbjct: 1 MKLDISKIVDKYH-LSKVEESILIYIINNIDHVKEIGVRGVAKEHYTSTTTIVNLAKKIG 59 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 Y GF + LS L + + EK K + L + + Sbjct: 60 YSGFLDMYYNLSFTLKDKRNYFNS----------------EKNNKYYGVELEELLALIED 103 Query: 120 EKLHECVTMLRSARRIILTGIG--ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 + + + + +L + ++ G S +AQ F KL+ +GF + + Sbjct: 104 KDISDFIDLLIKNKNEVIYTNGLAFSYFIAQYFTRKLIVLGFRCIYSEAYES---YDVNA 160 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 LL+AIS +G + A++ + G K+++ TG N L + + Sbjct: 161 IKAKLLIAISKSGETDFIIRASESAKKNGIKIVSFTGEAENTLAKMSDINFKIYDMHTID 220 Query: 238 NSASIS-ACHA-QGMLTDLLFIALIQQ 262 + +S + + ML + L +++ Sbjct: 221 DRNKLSNSFYPNALMLFEFLIGKYLER 247 >UniRef50_A8IDV1 Transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IDV1_AZOC5 Length = 327 Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats. Identities = 47/265 (17%), Positives = 93/265 (35%), Gaps = 9/265 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + +R G+ ++AD++L P A + + LA A VS +++ +F + LG + Sbjct: 33 SLVDLVRAHRAGMTPLHGRVADFVLRHPLQAATMGIEDLAAAAEVSVATINRFVRGLGLE 92 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF + + + G D + + A + A V + Sbjct: 93 GFSQFRALAVASFRPLSPVEKLEAQAAASGRDTDH--VQASLDSGLANLRAARAVADADV 150 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQ---ASS 178 + + SA R++L G G S + A L+ + ++ Sbjct: 151 FRQAAEAVSSADRVVLLGFGLSAPLVGLLADMLIPFCRAQMILDGQGGQERMIRRAFNVR 210 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D+++A++ A M G +++ IT + L A L AE + Sbjct: 211 AGDVVIALALPRYSLSTIELARGMRSQGARIIGITDSLSSPLALEADLLLLGPAEHPLLH 270 Query: 239 SASISACHAQGMLTDLLFIALIQQD 263 ++ A L + L L + Sbjct: 271 ----ASATALVALFEALVALLTARR 291 >UniRef50_C9A748 Transcriptional regulator n=1 Tax=Enterococcus casseliflavus EC20 RepID=C9A748_ENTCA Length = 245 Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats. Identities = 43/257 (16%), Positives = 94/257 (36%), Gaps = 24/257 (9%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 + + ++ + +L Y+L Q +S ++LA+ S ++V++F +K +GF Sbjct: 3 LTAENKSFSKKEWQLFQYVLNQQAEVCSMSIRELADATKTSSTTVLRFCRKFDCEGFSEF 62 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE----EKL 122 K+ L + L Q ++ ++L K++ A++ E E L Sbjct: 63 KIKLKKTLQKQGKT-------------------DRLFKQDKKALHYFFERMDESFYRETL 103 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + +IL S L K ++ + + + + + S + Sbjct: 104 LTIAKRISKTKLLILASDRESTLALTYAQQKFARLDKIVSVEEEAAPIKSVWRTLSSEAT 163 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 LL S G L E G +++T + ++ + + + S+ Sbjct: 164 LLVFSNKGADPFLESLITECTTAGISTISLTNRSTTSIAKLSERNFAYYFSDNQAAD-SL 222 Query: 243 SACHAQGMLTDLLFIAL 259 S+ L +LLF + Sbjct: 223 SSQIPAIYLVELLFDLV 239 >UniRef50_UPI000050FE27 transcriptional regulator, RpiR family protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FE27 Length = 285 Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 97/267 (36%), Gaps = 12/267 (4%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L ++ K + + P+ A + S+Q LA+ A V+ ++VV+ AQ LGY G+PA + Sbjct: 21 RLTRATKTILGVIKTDPEEAAYCSAQALADIAEVNVATVVRAAQSLGYSGWPAFSAEIRT 80 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 + S+ +HN+ + + I ++ + + E L+ + ++ Sbjct: 81 RYLASLSPRSLYLHNR------SQGLLATTIDKDIELLERMRDGLDESTLNRMSEHIIAS 134 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASSPDDLLLAISYTGV 191 + G+ + +G+ +++ V + D LAI+ Sbjct: 135 ESTGVFATGSYAAPGMQLSHVAQMLGYRVRLHSGSVTSMVNEVNLLTSHDCFLAITLWKS 194 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGML 251 R + A+ G KVL I AL A + AE IS+ Sbjct: 195 SRAVVQLAEVAREQGAKVLVIADRR-TALTDIADEYVLVPAESSEL----ISSLVCATSA 249 Query: 252 TDLLFIALIQQDLELAPERIRHSEALV 278 L L + D E + + L Sbjct: 250 VQYLLGCLARHDEERTQSMLGRIDDLW 276 >UniRef50_Q1LZ65 RpiR-like protein n=27 Tax=Lactobacillales RepID=Q1LZ65_STRMU Length = 274 Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats. Identities = 47/253 (18%), Positives = 95/253 (37%), Gaps = 10/253 (3%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 + + L ++++ Y+ + L+ +L+ VS +++++ +K GY GF K Sbjct: 27 KNNKKLTETEEYTWQYITRDFNEIGKLNISELSQAINVSNATIIRTLKKKGYGGFSEFK- 85 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 + + + + N+ D R + + + TLN + E + M Sbjct: 86 ---HEIEQKKNNSLHVLTNKSLKKDTRRSIIKNY-----QEVMRTLNTLDVTAIEESILM 137 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + A+RII+ G S L+A K + D + + + DL+L IS Sbjct: 138 IEKAQRIIIFARGFSELIASEMLVKFQLLNKYCELHTDPNIIRPVSARLTSKDLVLFISL 197 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY-TIAEEQATNSASISACHA 247 G L AA ++ K + ++ ++L S L E + + Sbjct: 198 NGETVALVDAARNCIKNRVKTILLSASESSSLAHLTSLQLIGFKTELSYFPDYEVHSRLP 257 Query: 248 QGMLTDLLFIALI 260 +L+ +L A Sbjct: 258 LSILSRILLDAYA 270 >UniRef50_A1WQC0 Transcriptional regulator, RpiR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WQC0_VEREI Length = 326 Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats. Identities = 49/277 (17%), Positives = 89/277 (32%), Gaps = 6/277 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + I +R + Q ++++A YL PD +S +A A VS +V +F +KLG+ Sbjct: 46 DFQTLIAERQSTMTQLEQRVAVYLRSNPDAILVDTSNTIAERAFVSPMTVTRFFRKLGFD 105 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 A+K A+ + ASQ S +Q + L + T A+ S Sbjct: 106 SAAAVKKAVRQRFASQVPSAIGSRFDQFQRQRTLLDKNGDVKDAVT-AIRQAAQYRSTPM 164 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASSPD 180 V ++ + + G +A +L I N + S Sbjct: 165 WARIVELIAHSDSVFAAGFQTMSYLANGLVSRLNYIRANVHELDGADGVYAPFFADRSAR 224 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 L+ I + R + A G +V+ N + + +E Sbjct: 225 RTLIIIDHFRYGRNGPVLAKVAREQGAEVIIFCDEHCNWAAGITAFVVTLPSEPGFF--- 281 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 A +L +I E +++ Sbjct: 282 -FRPTMALHFCMHMLVQDVIDMLGEPVRRQLQLLSEA 317 >UniRef50_D1U3G0 KpsF/GutQ family protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U3G0_9DELT Length = 343 Score = 117 bits (293), Expect = 4e-25, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 72/177 (40%), Gaps = 4/177 (2%) Query: 88 QIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLV 146 + +++ + + +T++ R R+++TGIG SGLV Sbjct: 3 CTSDRTDWLELAREVLDIEIEGLRTVSGQL-GDGFVRALTLMAECRGRVVITGIGKSGLV 61 Query: 147 AQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVG 206 + A L G A + + + +D++LA+S +G E+N + +G Sbjct: 62 GRKIAATLSSTGTPAFFLHPVEGAHGDMGMIRSEDVVLALSNSGGSDEVNAIIPTLRSLG 121 Query: 207 GKVLAITGFTPNALQQRASHCL--YTIAEEQATNSASISACHAQGMLTDLLFIALIQ 261 V+A+TG T +A+ + A + E A S+ A + D L + L++ Sbjct: 122 ATVIAMTGNTASAMAELADITIEVRVPREACPMGLAPTSSTTAHLAVGDALAVCLME 178 >UniRef50_C1TKE5 KpsF/GutQ family protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TKE5_9BACT Length = 335 Score = 117 bits (293), Expect = 4e-25, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 69/184 (37%), Gaps = 2/184 (1%) Query: 82 SVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIG 141 + D+ L +G +++ E + + E + R++++G+G Sbjct: 5 PSERDCPVFDDEKLVEIGRQVLLEEAEEIKKAASRMGPELAKAARIVQGCRGRLVISGLG 64 Query: 142 ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADE 201 SG + + A L +G + + A + +D+ IS++G E+ Sbjct: 65 KSGHIGRKIAATLASLGTPSFFLHAAEAAHGDLGMVRREDVAFLISHSGTTSEVVKLIPF 124 Query: 202 MLRVGGKVLAITGFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIAL 259 R+G V+A+TG + L + A L E N A S+ Q + D L + Sbjct: 125 FRRLGAPVIALTGSLESPLAKGADVILNASVEREADPLNLAPTSSTTVQLAIGDALAGVV 184 Query: 260 IQQD 263 + Sbjct: 185 TEMR 188 >UniRef50_Q47334 Polysialic acid capsule expression protein kpsF n=23 Tax=Escherichia RepID=KPSF5_ECOLX Length = 327 Score = 117 bits (293), Expect = 5e-25, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 68/169 (40%), Gaps = 3/169 (1%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILT-GIGASGLVAQNFAWKLMKI 157 + + E +AA+ + + ++ + + ++ G+G SG V + + L Sbjct: 22 VRQTLAEQSAALQNLSKQLDSGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKMSATLAST 81 Query: 158 GFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTP 217 G + + A + +P DLL+ IS +G E+ + G +++AIT Sbjct: 82 GTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRIIAITNNGN 141 Query: 218 NALQQRASHC--LYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDL 264 + L + A L+ E N A ++ + D L IA+I Q Sbjct: 142 STLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIHQRK 190 >UniRef50_C7LLS0 Transcriptional regulator, RpiR family protein n=3 Tax=Mycoplasma mycoides group RepID=C7LLS0_MYCML Length = 275 Score = 117 bits (293), Expect = 5e-25, Method: Composition-based stats. Identities = 41/282 (14%), Positives = 100/282 (35%), Gaps = 16/282 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLA----DYLLLQPDTARHLSSQQLANEAGVSQSSVVKFA- 55 M+ I + L++ + +L + + + ++A S +++ +F Sbjct: 1 MDVTKLIL-KLDQLSKEHSSASGITSRIILDNIELITNSTISKVAQITYTSPATITRFCQ 59 Query: 56 QKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLN 115 + L GF L+ L L Q E + + N+ + + + A+ AT Sbjct: 60 RHLDISGFSELQTLLRVYLNQQEEQNRLLLQNKDKKISKFEEISK--------AINATDA 111 Query: 116 VNSEEKLHECVTMLRSARRIILTGIGAS-GLVAQNFAWKLMKIGFNAAAVRDMHALLATV 174 + ++ + V + + + + L S A K+ IG + L Sbjct: 112 LIETNQVDKLVKAIYNTKTVALISYDNSVNHAVTELAEKMNLIGIPPVIINQQDLLDYYT 171 Query: 175 QASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL-YTIAE 233 + S + + IS+ + ++ + G ++ I+ PN + + Y + + Sbjct: 172 KISDSSWVFIVISHFAENITTYQSIVQLKKNGSRIGLISMNKPNKYSSVCDYWIKYAVTD 231 Query: 234 EQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 SA + + +LF ++ +D + + I+ + Sbjct: 232 ADPLQKIKHSANFSLLYVVQVLFNRILTKDHDRFEKIIKTLK 273 >UniRef50_A6TPC3 Transcriptional regulator, RpiR family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TPC3_ALKMQ Length = 284 Score = 116 bits (292), Expect = 6e-25, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 106/285 (37%), Gaps = 12/285 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N RI + L + LA Y++ A LSS +L + S ++V++F+ LGYK Sbjct: 4 NFFQRIHASKENLTKKQMNLAQYIVHNYKKAIFLSSSELGRKINASDATVIRFSHALGYK 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF + AL S S + + ++ + A+ E Sbjct: 64 GFSEMINALRSEFDGTISSVSRIELLHSPAEYQTHVDFNQIRECYAQAITN-------EY 116 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLA-TVQASSPD 180 + V L + + I+ G ++ +A+ + L++ G ++ ++D + + + Sbjct: 117 FEDLVENLLDSSKCIILGSESTASLAEYLNYHLIRYGISSDIIKDNSESIYKIYNEADEE 176 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +++++S + + ++ KV +IT + + C+ + Sbjct: 177 TVVISLSVRRYTKFQYYITERLIEKNMKVYSITDSIHSPYNSLNNKCIVLNS-STEEGFN 235 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPE---RIRHSEALVKKLV 282 +S +L +++ ++ + + + + V + Sbjct: 236 HLSHSVLMLVLQEIIRKGIVNRSKDEIAKCFSLLEKYNEDVDVFL 280 >UniRef50_C1IAG1 Predicted protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IAG1_9CLOT Length = 267 Score = 116 bits (291), Expect = 8e-25, Method: Composition-based stats. Identities = 38/246 (15%), Positives = 82/246 (33%), Gaps = 4/246 (1%) Query: 21 LADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPES 80 +A +L + ++S +LA+ S +++ +F KLGY F K + + + Sbjct: 24 IAITMLRNIRSIPNMSISKLADLCFTSPAAITRFCHKLGYSNFIEFKENIKINIGHYTKG 83 Query: 81 PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGI 140 P P + + E + + + + V ++ ++ + + G Sbjct: 84 LMKPKAMHYDL--PREDILNNMSLEIINEIETFKSFIDLKVIDRVVELIFNSNNVCIFGT 141 Query: 141 GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGV-RRELNLAA 199 S L+AQ KL+ I D+ + L + IS TG Sbjct: 142 QFSQLMAQELQRKLVNISKLIYHANDVQEQERLADELDENSLAILISPTGRFTLYHERLW 201 Query: 200 DEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIAL 259 ++ + V+ IT +R+ + +Y + + L + ++I Sbjct: 202 RKIEKSSATVVVITEQHKPEYMKRSDYIIYLPPRNDSNEYVQNH-RYDLSYLLEYIYIRY 260 Query: 260 IQQDLE 265 Sbjct: 261 GSMYKN 266 >UniRef50_B6GDB9 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GDB9_9ACTN Length = 253 Score = 116 bits (291), Expect = 8e-25, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 87/245 (35%), Gaps = 12/245 (4%) Query: 18 DKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQ 77 + LA Y L + + L+ +A E S+S + +F Q +G+ F ALK S Sbjct: 17 ENTLAKYFLDHFENLKELNVYDVAEECYTSRSGIRRFCQSIGFDNFSALK--------SC 68 Query: 78 PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIIL 137 I D L + M +EE L ++ A ++L Sbjct: 69 EWEWETHRKFFIGYTDHPA-FKGHLSNQIERMMIDVNEQVTEEDLDSLAQLIHDAENVVL 127 Query: 138 TGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNL 197 S + + F ++ + + D ++ + P DL++ IS +G Sbjct: 128 LASDFSSMAVREFQQSMLFMHKIPQILTDSFGSENSLASLGPSDLVIVISASGNYARAAR 187 Query: 198 AADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFI 257 + + +VL T LQ+ L+ + + ++ A + L DL++ Sbjct: 188 S-ELARSAACRVLVTT-NHDCELQEFFDAVLHL-SPDGHYGERTVYAKYGINYLFDLIYN 244 Query: 258 ALIQQ 262 ++ Sbjct: 245 RYFEK 249 >UniRef50_Q1QYQ3 Transcriptional regulator, RpiR family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QYQ3_CHRSD Length = 286 Score = 116 bits (291), Expect = 9e-25, Method: Composition-based stats. Identities = 50/277 (18%), Positives = 98/277 (35%), Gaps = 11/277 (3%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 + GL+ +++ L L + + LA ++GVS ++V +F ++LGYKG L Sbjct: 14 VDALKGGLSPAERALYSTLQANLENLAFETGASLAQKSGVSPNTVSRFMRRLGYKGLSGL 73 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 K AL L S + I + L + A+ A + + + V Sbjct: 74 KSALRNELRSNSLLNATLIERVAQQPADLTT----HLNAEIEALKAFAEQLTGQHWQDIV 129 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP-DDLLLA 185 + A R+ + G +AQ+FA +L + + +L S ++ Sbjct: 130 QRVSDAERVFVCGFQTVRGLAQDFANRLALVRPGVEFIDLYSGVLGQWMDSQDVRCCVIL 189 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASH-CLYTIAEEQATNSASISA 244 I T A+ L ++ + + + + ++ E S Sbjct: 190 IDITPYAEAGITFANHCLAHDADLVVFSDEYG--IARYIDTPHIISMTTETGLILESTGG 247 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + ++L + E ER+ A V++L Sbjct: 248 LTSAL---NVLLHCVAADHKEELRERMEAYRARVQQL 281 >UniRef50_C2EN35 RpiR family transcriptional regulator n=1 Tax=Lactobacillus ultunensis DSM 16047 RepID=C2EN35_9LACO Length = 256 Score = 116 bits (290), Expect = 9e-25, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 93/269 (34%), Gaps = 21/269 (7%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + ++ + L ++ + Y+ DT + +LA E S S + K +K+GY Sbjct: 5 SFDEKVVKTKNKLTTNELTVLQYIHKNADTINRKTISELAKETHFSSSFISKLVKKIGYD 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F A++L L L + ES ++K + T ++ + Sbjct: 65 SFAAMRLDLKNDLVKKIESNEYG-----------------VLKNQNIDIAKTNSLLLQMN 107 Query: 122 LHECVTMLRSARRIILTGIGASG-LVAQNFAWKLMKI-GFNAAAVRDMHALLATVQASSP 179 + +A I + G G S + + LM + + + + + Sbjct: 108 FKPINKLFDTATAIYVYGTGHSQNNYMRELSRNLMALVNVPVIFLSGQSEFQSVIYTAKS 167 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL--YTIAEEQAT 237 + S TG L A + +++ T F+ N L A++ L Y + T Sbjct: 168 TSCFIIASTTGKTPVLIDAVKILNLSQVPIISFTSFSDNELSDLATYNLFYYLTPIKNPT 227 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLEL 266 N +I + G + D + I + Sbjct: 228 NHRNIRSYLPLGYVVDFVIREYISHLQKK 256 >UniRef50_A3PQG1 Transcriptional regulator, RpiR family n=6 Tax=Rhodobacteraceae RepID=A3PQG1_RHOS1 Length = 286 Score = 115 bits (289), Expect = 1e-24, Method: Composition-based stats. Identities = 49/276 (17%), Positives = 107/276 (38%), Gaps = 11/276 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLAD----YLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQ 56 M IR+ +A D + +LL S++ LA AG + ++V + A+ Sbjct: 1 MQQETEIREALARVAAGDAPILRGFAVWLLDNLSAVAFNSTRSLAALAGTNPNTVTRLAR 60 Query: 57 KLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNV 116 ++G+ G+ + + A+ E + + + + + N + + Sbjct: 61 EIGFDGYDSFRSAVQEVVQRRNIRYGERAEALRHR--SEADIWGEALTANLGNIETLFSA 118 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMK-IGFNAAAVRDMHALLATVQ 175 + L CV L +ARR+ G+ + +A F++ + A+L V Sbjct: 119 EGMDLLESCVEPLLAARRVHTIGVRSCFGLAHYFSYVGGRAFANFIEVPVTPGAILDQVA 178 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 +++P+D+++AI+Y E+ A G ++LA+T + + A + Sbjct: 179 SATPEDIVVAITYEHYSAEVVRACHVARSCGARILALTDSHSAPVAEGAWKVVRLPMAGP 238 Query: 236 ATNSASISACHAQGMLTDLLFIALIQQDLELAPERI 271 + + A + +LL A+ + + A + Sbjct: 239 QI----LPSLTAAYIALELLLSAMAARSPDAAARLL 270 >UniRef50_A0P1C3 SIS domain protein n=2 Tax=Rhodobacteraceae RepID=A0P1C3_9RHOB Length = 289 Score = 115 bits (289), Expect = 1e-24, Method: Composition-based stats. Identities = 50/283 (17%), Positives = 97/283 (34%), Gaps = 16/283 (5%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L R++ L + + +LA ++ L + + + LA +AGVS+ +V + ++LG G Sbjct: 16 FLKRLQDETPKLPKQEARLAQFVSLNISSLGLETGKSLAEKAGVSEVTVGRLLRRLGCDG 75 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 LK L E + S IR + ++ + N Sbjct: 76 MKGLKQLLREHYSVTTASFVTDGDIPIRFVET--------LEAEVQGLTNVFNQTQGGNW 127 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD-- 180 E +L A I TG + ++FA +L N + ++L SP Sbjct: 128 DEVTRLLSDAETIFATGFQSIRGTVEDFARRLALARKNVHFLSAHDSMLGEWLDQSPQSA 187 Query: 181 --DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 L+ + E A G V+ ++ + ++ A +Y + Sbjct: 188 ASSCLILVDVVPYASESVKLARLAKSQGRSVIVVSDEYCHWSREIADAAIYAPSRTGLF- 246 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + L+ + + + R+ +A KKL Sbjct: 247 ---LESTIGIVAALSLMVDVAARANETASAHRLVQWKANSKKL 286 >UniRef50_Q7MJB4 Transcriptional regulator n=3 Tax=Vibrio RepID=Q7MJB4_VIBVY Length = 308 Score = 115 bits (289), Expect = 1e-24, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 91/249 (36%), Gaps = 8/249 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N ++ ++ Q L +S+ L +++ + + LA +A VS++++ ++ KLG+ Sbjct: 22 NTYRQLAEQLQSLTESEANLHAFIVGHFEELSYYGIIDLAQKAQVSKATIGRYLNKLGFT 81 Query: 62 GFPALKLALSEALASQPESPSVPIHNQ--IRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ A K AL + L + + + + + ++ I + + Sbjct: 82 GYAAFKNALKQELITNNMVAPIEANKSKLFDQEIDTKTEAQRYIGNVAQLIDQFRQELNI 141 Query: 120 EKLHECVTMLRSARR-IILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQAS 177 E+L + + R I + G +S +A +F+ L N + D L + Sbjct: 142 EELDKLSQKIAEKNRTIYVVGPASSHSLALHFSTLLKYSRSNVVLLPLDKGELPKAMLGI 201 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 S +D+L+A SY + V +T N + ++ + Sbjct: 202 SEEDVLVAFSYYRFNPVVLDITKYFSSKCAFVAMVTNTHSNPYGIYSDVQFVLPSDVDSI 261 Query: 238 NSASISACH 246 + Sbjct: 262 ----FHSRT 266 >UniRef50_C3RJ80 Predicted protein n=3 Tax=Bacteria RepID=C3RJ80_9MOLU Length = 257 Score = 115 bits (289), Expect = 1e-24, Method: Composition-based stats. Identities = 41/263 (15%), Positives = 93/263 (35%), Gaps = 16/263 (6%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + Y S++K+ +L P + S L + S+S++++F QKLGY Sbjct: 1 MDFKKTVAIHYTEFTPSERKICARILEDP-QIVNNSIVVLGDLCETSKSAILRFYQKLGY 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +G+ K ++ E+ + E + ++ +E + + ++ + Sbjct: 60 RGYSEFKYSVEESFKNNDEKKL-----------SNESLLSQISQEYSNTILELGALDYDH 108 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L E +++ ++ GI + A + L +VR+ L + + + D Sbjct: 109 QLKELASLIDKYPHVLSIGINNTYFAASQLEYSLYSHNRFIQSVREDIQLTYLINSINQD 168 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 L + S +G E G K++ IT + L + +S Sbjct: 169 YLCIIYSVSGSTYTYENFIKEASAKGAKIVLITIDGNSELLPLVDLAFVLPSISLPISSI 228 Query: 241 SISA----CHAQGMLTDLLFIAL 259 ++++ Sbjct: 229 DSIIQIDNRIMLYYFSEIISYYY 251 >UniRef50_C2DZ33 Transcriptional regulator n=9 Tax=Lactobacillus jensenii RepID=C2DZ33_9LACO Length = 262 Score = 115 bits (289), Expect = 1e-24, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 98/268 (36%), Gaps = 26/268 (9%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN RI ++ L+ S+K++ LL LS + L+ + VS+S++ + +KLG Sbjct: 6 MNLQTRIYEKQGDLSGSEKEIIQGLLSSAKENSQLSLKDLSKKLYVSESAIFRLCKKLGL 65 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ LK LS + + +KE T+ Sbjct: 66 SGYSELKFELSAVSSIKNHPN------------------NNFVKEMADLTTNTIKQFEAR 107 Query: 121 KLHECVTMLRSARRIILTGIGASG-LVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASS 178 L +++A+ I L G L+A + +L G + L Q + Sbjct: 108 NLTNFYIDVQTAKTIYLYSTGWQQELLASYISKELFLFGKQTVLLPSALDELKMRGQFFN 167 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVG--GKVLAITGFTPNALQQRASHCLYTIAEEQA 236 D+L ISY+G + ++ VG K++++T N L + + + + + Sbjct: 168 KGDMLWTISYSGNNSSIVNELKKISLVGDKIKLVSLTKMGSNDLATISDYSFFFQTIDFS 227 Query: 237 T----NSASISACHAQGMLTDLLFIALI 260 + S +L DLL Sbjct: 228 YKNNGGGSPRSCFSPAYILIDLLMNGYF 255 >UniRef50_C4ICI5 Transcriptional regulator, RpiR family n=2 Tax=Clostridium butyricum RepID=C4ICI5_CLOBU Length = 240 Score = 115 bits (289), Expect = 1e-24, Method: Composition-based stats. Identities = 38/230 (16%), Positives = 90/230 (39%), Gaps = 23/230 (10%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L+Q ++ + YL+ D + + +A + S S++++ A+KLGY GF L +L Sbjct: 12 KLSQIEETILTYLIENIDICINKGIRSIAKDNFTSPSTIIRLAKKLGYSGFVELMYSLKN 71 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 L++ + L + + +N N N ++ + + ++ Sbjct: 72 KLST----------------ETLDTFFDGINDKNI------FNTNYDKACEDFIECIKD- 108 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVR 192 I+++G G S +V++ KL+ +G + + + + + ++ +S +G Sbjct: 109 GNILISGEGFSEIVSKYMYMKLLVLGKKSILSTFIDFDILFDNHADTINSIILVSKSGEG 168 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + K+++ TG + L + + E+ N Sbjct: 169 NHCVNSCIHAKERNLKIISFTGNVESTLAKNSDITFIIPDCEKMDNDNYY 218 >UniRef50_Q2ST84 Phosphosugar-binding transcriptional regulator, RpiR family, putative n=3 Tax=Mycoplasma mycoides group RepID=Q2ST84_MYCCT Length = 265 Score = 115 bits (289), Expect = 1e-24, Method: Composition-based stats. Identities = 51/268 (19%), Positives = 105/268 (39%), Gaps = 9/268 (3%) Query: 2 NGLLRIRQRYQ-GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 + L +IR Q Q K + +LL R L+ +++ E S + + +FA+KL Sbjct: 4 DLLTKIRDLIQTDCNQDYKNIGAFLLKNYSNIRSLTITKISKECNTSPTQITRFAEKLNL 63 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGF LK L S+ D + + ++ Sbjct: 64 KGFSELKYRL--DDISKSIIIDNQFIPISSRIDDKTKFYKDYFEILNNSIKQQEANLKNL 121 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++E ++ A ++ L S +++NF +L +A + D ++ + P+ Sbjct: 122 PINEVANLISKANKVYLFAFNLSYNISKNFIQRLRWYQKDAISESDYISIKTYINIIKPE 181 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++ I+ +G + A+ + K++ I G +++ LY +E S Sbjct: 182 DLVILITISGENEYIKNIAESL-NRKVKIVGI-GPKQSSMINLFDKYLYFQTDESELWS- 238 Query: 241 SISACHAQGM--LTDLLFIALIQQDLEL 266 I++ AQ L D +++ ++ + Sbjct: 239 -INSIKAQLTVQLLDFVYVKWLKSTKKK 265 >UniRef50_Q6F0H6 Putative transcriptional regulator n=1 Tax=Mesoplasma florum RepID=Q6F0H6_MESFL Length = 271 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 40/273 (14%), Positives = 109/273 (39%), Gaps = 13/273 (4%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 + L ++ D + + + Q L+ V ++++V+ +K G+ ++++ + Sbjct: 3 KNLTFAEMSALDQINKNINFFVSNNLQNLSKNYNVGEATLVRLVKKRGFSSLKEMQISYA 62 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 + + + + + + + ++ T + + +++ +L + Sbjct: 63 KKIDIENLFGNSDNNQN-------TKIINDVANFEVFSIIQTSECINIKDINKTAELLIN 115 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS-PDDLLLAISYTG 190 + + + GI S L A A L KIG N + + +H + + + D ++L S +G Sbjct: 116 SNKRLFFGIENSQLSATFLANNLQKIGLNCSVYQSVHGAITELNFLNKEDSIILIFSSSG 175 Query: 191 VRRELNLAADEMLRVGGKVL---AITGFTPNALQQRASH-CLYTIAEEQATNSASISACH 246 +E A + + + + + Q A+ ++ + + +IS+ Sbjct: 176 ETKECIEVAKIAHEMNLRYIWIGSEFASKKSEYLQMANIKIFHSYHKNEILRFPNISSSS 235 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 Q +++LLF +I + + + + S +VK Sbjct: 236 GQLFISNLLFNIVIN-NKDGTSDILTKSNTMVK 267 >UniRef50_A4X3Y2 Helix-turn-helix protein RpiR n=3 Tax=Actinomycetales RepID=A4X3Y2_SALTO Length = 283 Score = 115 bits (287), Expect = 2e-24, Method: Composition-based stats. Identities = 55/268 (20%), Positives = 102/268 (38%), Gaps = 19/268 (7%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L + +++A L+ Q +LS+ ++A AGVSQ SV +FA LG+ G+PAL+ L E Sbjct: 21 RLTPTQRRIAHCLVQQGPAVAYLSAAEVAELAGVSQPSVTRFAMALGHDGYPALRRHLRE 80 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN-SEEKLHECVTMLRS 131 A+ P + ++ ++ + + +++ +L + Sbjct: 81 LTAAPRGGRPNPDNE-----------LQQAVRAEIENLDRLADQFADRDRVAAAGRVLAA 129 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD---DLLLAISY 188 + + + G+ A+ +A FA+ K+ + + D +LL + + LLA+ Sbjct: 130 SHPLPVLGLRAAAPLAAYFAYFAAKVLPDVRVLDDGGSLLTDRIEQAAEAGATALLALVL 189 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 RE A E G V+ IT + + A L Q + Sbjct: 190 PRYPREALDALREARTAGLTVVTITDSPVSPAGEHADVVLPAAVGAQLVFDLHTAPMTLA 249 Query: 249 GMLTDLLFIALIQQDLELAPERIRHSEA 276 +L + A R+ EA Sbjct: 250 MVLLQAICDA----APVQTQRRLEAFEA 273 >UniRef50_B8DD88 Phosphosugar-binding protein n=16 Tax=Listeria monocytogenes RepID=B8DD88_LISMH Length = 250 Score = 114 bits (286), Expect = 3e-24, Method: Composition-based stats. Identities = 47/264 (17%), Positives = 92/264 (34%), Gaps = 20/264 (7%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + + L+ ++K++ Y+ T +S LA VS ++V++ KL Sbjct: 5 SLYRLFAPQIEFLSPAEKQVFFYIDNHISTIEKMSLTSLAESTNVSTTTVIRMCHKLKLS 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK L D EK+ +++ Sbjct: 65 GFSELKFLLHSDKTETKP----------LSKDYSSTFLEKIRLGI--------EQLPKKE 106 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + T + A +I + +G + + + F+ L+ N D + Q DD Sbjct: 107 IEQVATRIAYAPKIYIACLGMTKTLGEYFSKSLVTSKKNVVFTYDSFIIDILPQIVERDD 166 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++ IS +G A+ + V+AI + Q +Y +EE Sbjct: 167 LIIIISESGGTENTLSLAEHLKYNLSNVIAIVNNPNAQISQYVETIIYASSEE--FGEDL 224 Query: 242 ISACHAQGMLTDLLFIALIQQDLE 265 HA ++ L + + +Q + Sbjct: 225 FKHHHAPLLIVIDLILNIFEQQKK 248 >UniRef50_C0X7I6 Phosphosugar-binding transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X7I6_ENTFA Length = 240 Score = 114 bits (286), Expect = 3e-24, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 89/270 (32%), Gaps = 49/270 (18%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN +++ Y L +++ ++ YL Q A LS +++A S SS+++ A+KL Sbjct: 1 MNL-DYLKETYH-LTKTESQILYYLDQQSTNAADLSIREVAKHCFSSPSSIIRLAKKLNL 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ L L EA SQP + + K Sbjct: 59 SGYNELIYKLKEAHFSQPIPYETAPS--FETTNEFCRLLAK------------------- 97 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + ++ G S +A + G + H++ ++ + Sbjct: 98 ---------HKSHLFVILGHDFSRHLAAYISEVFNFHGIPSITTAHTHSI---NSQNNQN 145 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 L + +S++G + L A +++ G + L + A T + + Sbjct: 146 FLFIILSHSGEEKYLKETALLAKEKKHPIISFVGAKNSTLGRLADLVFSTDS------YS 199 Query: 241 SISACHAQ--------GMLTDLLFIALIQQ 262 S AQ + + L A + Sbjct: 200 PFSTSVAQPQMFFGQTLITFEALICAYLNH 229 >UniRef50_C6VU42 KpsF/GutQ family protein n=3 Tax=Sphingobacteriales RepID=C6VU42_DYAFD Length = 324 Score = 114 bits (286), Expect = 3e-24, Method: Composition-based stats. Identities = 34/173 (19%), Positives = 75/173 (43%), Gaps = 2/173 (1%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWK 153 ++ + ++++++ A+ + + +E +L S R++++G+G S +V Q Sbjct: 6 NIQSIAKEVLRQEAEAVRDLIELIDDEFEKCVYAILHSGGRVVISGVGKSAIVGQKIVAT 65 Query: 154 LMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 L G A + A+ + +D+++ IS +G E+ + + R G K++A+ Sbjct: 66 LNSTGTPALFMHAADAIHGDLGMIQDNDVVIVISKSGDTPEIKVLVPLLKRTGVKMIAMV 125 Query: 214 GFTPNALQQRASHCL--YTIAEEQATNSASISACHAQGMLTDLLFIALIQQDL 264 + L + L + AE N A ++ L D L I L++ Sbjct: 126 SNKDSYLAKNCILTLHAHAPAEADPLNLAPTTSTSVTMALGDALAICLLEARG 178 >UniRef50_C6DIN8 KpsF/GutQ family protein n=10 Tax=Enterobacteriaceae RepID=C6DIN8_PECCP Length = 363 Score = 114 bits (285), Expect = 4e-24, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 75/200 (37%), Gaps = 2/200 (1%) Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 +A + + +++ D + G+++I + + C + Sbjct: 24 QADHAPQADHTRQKSHELPADFDFQQAGKQVISIERDGLAQLDQYIDDNFTLACKKIFDC 83 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGV 191 ++++ G+G SG + A G A V A + +P D+++AIS +G Sbjct: 84 QGKVVVMGMGKSGHIGCKMAATFASTGTPAFFVHPGEASHGDLGMVTPHDIVIAISNSGE 143 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQG 249 E+ + R ++ +T + + + A L ++ A S+ A Sbjct: 144 SHEILSLIPVLKRQKVFLICMTSAPESTMGKAADIHLCVHVPQEACPLGLAPTSSTTATL 203 Query: 250 MLTDLLFIALIQQDLELAPE 269 ++ D L +AL+Q A + Sbjct: 204 VMGDALAVALLQARGFTAED 223 >UniRef50_Q89R61 Bll2911 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89R61_BRAJA Length = 290 Score = 114 bits (285), Expect = 4e-24, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 94/278 (33%), Gaps = 11/278 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +R L +++ ++ A S + LA AG ++ + A+ +GY Sbjct: 8 SPLSELRIALPSLPMRLQEVGRFVAANDYDATTRSMRDLAAVAGADPAAFTRLAKAIGYS 67 Query: 62 GFPALKLAL--SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ AL+ AL + + + + LV +KL+ E L Sbjct: 68 GWDALRAALTEARRPSQTSPFSGRAKSRRHGPHADVALVTDKLVAEAAG-----LPRIPA 122 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF-NAAAVRDMHALLATVQASS 178 + + E L A+RI + G + VA+ ++L V + A Sbjct: 123 QPIAEAAGALHDAKRIWIAGYRSCRSVAELLNYELRLFRPEQVQLVGASGPDDLDLGAFR 182 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P + ++ I + A R G ++AI + + A H L A Sbjct: 183 PGEAVIVIGFLPYTHASVRVAQAAYRAGATLIAIADSVSAPMAEGADHVLLFEAASSP-- 240 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + + L A +R+ ++EA Sbjct: 241 -GFFPSLTGAIAIAQSLAAVTFSLGGIAAKKRLENTEA 277 >UniRef50_C4FYW5 Putative uncharacterized protein n=2 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FYW5_ABIDE Length = 286 Score = 114 bits (285), Expect = 4e-24, Method: Composition-based stats. Identities = 46/270 (17%), Positives = 108/270 (40%), Gaps = 12/270 (4%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 I + ++ + Q +K + ++ + +AR SS+ ++ VS++S+ +FA+K GYKG+ Sbjct: 25 QNIEKNFEDMTQLEKSIGEFFIKN-KSARDFSSKGISGLLYVSEASLHRFAKKCGYKGYR 83 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 + + + ++ + + + + KL T + + + ++ + Sbjct: 84 EFIFSYEKDIENERNNGTDEK--------KVNQLIIKLKAAYTTLVEENFGLIKDNQIRK 135 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 T+L S +R+ILTG V + + K +K+G + V L +V + D L++ Sbjct: 136 IATLLNSGKRVILTGSETENAVFEEYKLKYLKLGIDINTVTKKEFLEPSVDLLNKDSLVI 195 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 +G L + ++ IT + + + N S+ Sbjct: 196 VCDISGENDNLKTVVQKAEVKEADIVLITANEACEYADLCNEVIKVSYPKGLANVISM-- 253 Query: 245 CHAQGMLTDLLFI-ALIQQDLELAPERIRH 273 M D+++ ++ A ++ + Sbjct: 254 QMVILMTMDVIYSYCSANKNYFKAIKKEKE 283 >UniRef50_Q5JH71 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=53 Tax=cellular organisms RepID=GLMS_PYRKO Length = 602 Score = 114 bits (285), Expect = 4e-24, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 67/205 (32%), Gaps = 3/205 (1%) Query: 77 QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRII 136 + + ++ K I E A+ ++ + E + + + +II Sbjct: 233 EKPVHEISWTLEMAEKAGYPHFMLKEIYEQPRAIKDAIHG-NREIIRSVAEEIANYDKII 291 Query: 137 LTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQ-ASSPDDLLLAISYTGVRREL 195 +G S A ++ V + + L++AI+ +G + Sbjct: 292 FVAMGTSYHAALVGKSLFQRLAKKVPIVEEASEFRYEFEDLIDDKTLVIAITQSGETADT 351 Query: 196 NLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLL 255 A + G KVLA+ + + A LYT A A+ Q + +L Sbjct: 352 LAAMKLAKKNGAKVLAVVNVVGSMATRIADLTLYTHA-GPEIGVAATKTYTTQLTVLTML 410 Query: 256 FIALIQQDLELAPERIRHSEALVKK 280 I L + + + + E + K Sbjct: 411 AIELAKVLGTASEDYLEKLEDELMK 435 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 28/174 (16%), Positives = 51/174 (29%), Gaps = 11/174 (6%) Query: 96 RLVGEKLIKENTAAMYATLNVNSEEK-LHECVTMLRSARRIILTGIGASGLVAQNFAWKL 154 EKL E ++ L E L+ R G G S A A KL Sbjct: 423 EDYLEKLEDELMKVPELVELALKHDEALRELAETLKDKRDFFYIGRGISVPTALEGALKL 482 Query: 155 MKIG-FNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRE-LNLAADEMLRVGGKVLAI 212 +I +A + + ++AI+ +G + + +E G ++++ Sbjct: 483 KEISYIHAEGLSAGELKHGPLALLEDGVPVVAINPSGKVFDKMVSNIEEAKARGAMIISL 542 Query: 213 TGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLEL 266 + L + + + E + I LL L Sbjct: 543 SDRE--ELSRVSDVLVKMP--EVDELLSPIVYVVP----LQLLAYHLAVLRGND 588 >UniRef50_C1A8V3 Arabinose 5-phosphate isomerase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8V3_GEMAT Length = 323 Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 82/179 (45%), Gaps = 4/179 (2%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAW 152 + G +++ A+ A+ ++ V +L R R+I+ G+G SGLVA+ A Sbjct: 8 TILERGRRVLALEAEALRASETAL-GDEFVHAVQLLTECRGRVIVAGVGKSGLVARKMAA 66 Query: 153 KLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAI 212 G A + + ++ + PDD+ + IS +G EL + + R+G +++A+ Sbjct: 67 TFTSTGTPAMFLHPVESVHGDLGIVGPDDVAILISKSGESDELLGLIEALARLGVRMIAM 126 Query: 213 TGFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQDLELAPE 269 T + L + A L + +E+ + A ++ L D L +A++QQ A + Sbjct: 127 TAVAGSRLARHADVTLDLLVKEEACPHDLAPTTSTTVTMALGDALAVAVLQQKGFRAED 185 >UniRef50_Q8D1Q8 Arabinose 5-phosphate isomerase n=525 Tax=cellular organisms RepID=KDSD_YERPE Length = 328 Score = 113 bits (284), Expect = 5e-24, Method: Composition-based stats. Identities = 28/174 (16%), Positives = 67/174 (38%), Gaps = 4/174 (2%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAW 152 + G+++++ + +E+ + ++++ G+G SG + A Sbjct: 11 DFQQAGKQVLQIEREGLAQLDQYINED-FSRACEAIFRCHGKVVVMGMGKSGHIGCKIAA 69 Query: 153 KLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAI 212 G A V A + +P D++LAIS +G E+ + R ++ + Sbjct: 70 TFASTGTPAFFVHPGEASHGDLGMITPQDIVLAISNSGESNEILTLIPVLKRQKILLICM 129 Query: 213 TGFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQDL 264 + + + + A L ++ A ++ A ++ D L +AL++ Sbjct: 130 SSNPESTMGKAADIHLCINVPQEACPLGLAPTTSTTATLVMGDALAVALLKARG 183 >UniRef50_B3E057 Arabinose 5-phosphate isomerase and CBS domains n=5 Tax=Verrucomicrobia RepID=B3E057_METI4 Length = 325 Score = 113 bits (284), Expect = 5e-24, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 77/184 (41%), Gaps = 5/184 (2%) Query: 91 GDDPLRLVGEKLIKENTAAMYATLNVNS---EEKLHECVTMLRSARRIILTGIGASGLVA 147 + L + +++ A+ + E+ + + + +I++TG+G SG + Sbjct: 1 MQEDLVGLAKRVFDLEMDALRIVRKQLNAAFEQAILVLEKTILANGKIVVTGVGKSGHIG 60 Query: 148 QNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGG 207 + A L G + + ++A + + D ++A+SY+G E+ + R+ Sbjct: 61 RKIAATLTSTGAPSVVLDAVNAFHGDLGMVNRGDAVVALSYSGETEEILRLVPHLKRMTT 120 Query: 208 KVLAITGFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDLE 265 ++AITG + L + + L E N A S+ A +L D L + L+++ Sbjct: 121 SLIAITGNENSTLAKNSDLVLSVRIDREACPLNLAPTSSTTAMLVLGDALAMVLLEKRGF 180 Query: 266 LAPE 269 + Sbjct: 181 KKED 184 >UniRef50_B9CKY1 Transcriptional regulator, RpiR family protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CKY1_9ACTN Length = 266 Score = 113 bits (284), Expect = 5e-24, Method: Composition-based stats. Identities = 43/269 (15%), Positives = 102/269 (37%), Gaps = 17/269 (6%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ ++ + L ++ + + + P++ ++ A AGVSQS++ +F QK+GY Sbjct: 1 MDAFQQMSSNERKLTPTEHLIFEAITADPESFVQSTTTMAAQYAGVSQSAISRFCQKIGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F ++ L +L++ + + + I+ + AT +E Sbjct: 61 DTFSEFRMDLMLSLSTHTPTQTASQE-------------KNPIEYLCNMVRATDISVKKE 107 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + ++I TG G S A + +L+K ++ ++ + D Sbjct: 108 VFRNLTKRIIRSGKVITTGGGLSAPPALMLSMELLKYKIPCYFAQNGQEMIYMHVVNPDD 167 Query: 181 DLLLAISYTGVRRELNLAADEM-LRVGGKVLAITGFTPNALQQRASHCLYTI---AEEQA 236 +++ S +R L ++ V+ ++ + L++ A + E Sbjct: 168 LIIIFSSKNDTQRLLINIIQDLPKNRRPYVVLVSHSATHPLKKYADDFILLPTWQTERYP 227 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLE 265 +++ A + L L ++D E Sbjct: 228 VYIEPMTSMLAFCSIVMLSISKLSKKDPE 256 >UniRef50_B6ARK4 Sugar isomerase, KpsF/GutQ family n=3 Tax=Bacteria RepID=B6ARK4_9BACT Length = 332 Score = 113 bits (284), Expect = 5e-24, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 70/167 (41%), Gaps = 2/167 (1%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG 158 +++ E + A+ A E +L+ + ++ +TG+G SG VA+ A L G Sbjct: 13 AREVLDEESRALSALSLSMDEAFSRAVAAILQGSGKVAVTGMGKSGHVARKIAATLSSTG 72 Query: 159 FNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPN 218 A + A+ + A D +LA+S +G +E+ + R+ ++++ + Sbjct: 73 TPAFFLHPGEAVHGDLGALDRGDTVLALSKSGETQEILDLLPLLKRIDIPLISMVCERES 132 Query: 219 ALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQD 263 L + + L E A ++ + L D L + L+++ Sbjct: 133 TLARLSEVTLLIPVTREAGPLGIAPTTSTTSMLALGDALAMVLLEER 179 >UniRef50_UPI000196CB04 hypothetical protein CATMIT_02765 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196CB04 Length = 230 Score = 113 bits (284), Expect = 5e-24, Method: Composition-based stats. Identities = 34/251 (13%), Positives = 91/251 (36%), Gaps = 21/251 (8%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 + L +++ + +Y++ + S ++LAN VS +++++F +K+G +GF LK L Sbjct: 1 MESLNETEAYVYNYVVKNTKKVLNASIRELANYTHVSTATIMRFCKKMGCEGFTELKYRL 60 Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 E + +Q + + + + + + + E +H +++ Sbjct: 61 KEHVEAQETKE------------------DDVSDQFASFIERVKSSDYLESIHRSAAIIK 102 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 + I+ GIG + A+ + L +G+ V + V +++A Sbjct: 103 QSDSILTLGIGINSDFAKYTSRLLSHVGYYCYGVDGAAYPVQRVAE-GHQGVIIAFYEQR 161 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGM 250 ++ L ++ ++ +++ ++ I + Sbjct: 162 QKKLLFEEIYRYKNKNYIIIMLSNNNMGSMEHLCDEVIHISDGNVMLGK--IYSGVPMLY 219 Query: 251 LTDLLFIALIQ 261 + L L + Sbjct: 220 AIEKLAYELTK 230 >UniRef50_A6M3E6 Transcriptional regulator, RpiR family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M3E6_CLOB8 Length = 252 Score = 113 bits (283), Expect = 7e-24, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 93/273 (34%), Gaps = 26/273 (9%) Query: 1 MNG-LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M L +I + ++++ +Y++ D+ L + +A E S S++++ ++KLG Sbjct: 1 MKVDLSKIVNNK-KITPIEEQVLEYIINNIDSVMDLGVRGVAAENYTSTSTIMRLSKKLG 59 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 + GF + + D + E+ + E Sbjct: 60 FTGFIDMIYNI-----------------TPLIDGGGTGIIEESEALIGTDIKFLSKYTDE 102 Query: 120 EKLHECVTMLRSA--RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 E + + +L S + I + G S + + F KL+ +G + + + Sbjct: 103 ENVKRFIEILASGTKKYIFIYARGYSEITGEYFNKKLLGVGIKSILIDSKGSFE---NNL 159 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 + L+ IS +G +E+ + V++ T N++ + + Sbjct: 160 EDMETLIVISKSGETKEVLDKVQVAKKKNKVVISFTKEVENSISALSDISFKIFDMHKLD 219 Query: 238 NSA--SISACHAQGMLTDLLFIALIQQDLELAP 268 +S S M + L Q+ + Sbjct: 220 DSNVLPNSFFANMLMFMEYLIYRYYQETRKENK 252 >UniRef50_C8PCG0 Transcriptional regulator n=2 Tax=Lactobacillus RepID=C8PCG0_9LACO Length = 268 Score = 113 bits (283), Expect = 7e-24, Method: Composition-based stats. Identities = 51/268 (19%), Positives = 97/268 (36%), Gaps = 26/268 (9%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + R+ ++ L+ S+K++ +L HLS +LA + VS+SS+ + +K+G Sbjct: 3 DLKRRVWEKSGELSTSEKEIVRFLFSNSKLCSHLSLAKLATKLYVSESSIFRLCKKIGLS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ L+ LS+ + + + E A+ LN S Sbjct: 63 GYSELRFELSDLAHERKINTI------------------DIATEVENAIQEVLNYCSTLD 104 Query: 122 LHECVTMLRSARRIILTGIGASG-LVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASSP 179 L + + A I L G S L+A+ +L IG + L + ++ Sbjct: 105 LEKVFLDIEHANTIYLYSTGWSQELIARYLLHELFMIGKKVVMLPSAIEELKMVSKRATE 164 Query: 180 DDLLLAISYTGVRRELNLAADEML--RVGGKVLAITGFTPNALQQRASHCLYTIAEEQ-- 235 D+L +SY+G ++ ++ ++ T P L + + + Sbjct: 165 GDMLFIVSYSGDNVQIRDEISKIQLINNKIITVSFTTLRPAKLVSLVDYSFFFRTLKLKK 224 Query: 236 --ATNSASISACHAQGMLTDLLFIALIQ 261 A+I + DLL Q Sbjct: 225 FWVEGDATIDSFSPAYTFIDLLIAKYYQ 252 >UniRef50_D1B671 KpsF/GutQ family protein n=2 Tax=Synergistaceae RepID=D1B671_THEAS Length = 334 Score = 113 bits (283), Expect = 7e-24, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 66/171 (38%), Gaps = 2/171 (1%) Query: 101 KLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFN 160 ++I++ A+ + E + + + R+++ G+G SGL+ + A L +G Sbjct: 23 QVIRQEARALEDGASRMGLELVRAARMVASCSGRVVVCGLGKSGLIGRKIAATLASLGCP 82 Query: 161 AAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNAL 220 A + + DD+ L +S +G RE+ R+G V+A+TG + L Sbjct: 83 AFFLHAAEGSHGDLGMVCRDDVGLFLSNSGTTREVLEMVPFFRRIGCPVIALTGRRDSPL 142 Query: 221 QQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDLELAPE 269 A L E A S+ Q + D L + + + Sbjct: 143 GLSADVVLDCSVGREADPLGIAPTSSTTLQLAVGDALAGMVTRLLGLRVED 193 >UniRef50_B0SHW1 Sugar phosphate isomerase n=6 Tax=Leptospira RepID=B0SHW1_LEPBA Length = 324 Score = 113 bits (283), Expect = 7e-24, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 78/175 (44%), Gaps = 4/175 (2%) Query: 98 VGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILT-GIGASGLVAQNFAWKLMK 156 + ++ + + +++ + C+ ++ +++ ++ G+G SG +A+ + L Sbjct: 9 IIKQALDDEISSLVYFRENLDPS-VKNCIDLILNSKGKVIVTGVGKSGDIAKKISHTLSS 67 Query: 157 IGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT 216 G +A + A PDD++LAI +G ELN + ++G K++ IT + Sbjct: 68 TGTSAYFLHPTDASHGDSGIVGPDDVVLAIGKSGESEELNYILPTLRKIGAKIVGITANS 127 Query: 217 PNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDLELAPE 269 + L + + + T E + A S+ +L D + +AL++ A + Sbjct: 128 KSKLAELSDVVIITPVLKEACPLDLAPTSSTTIALVLGDAIAVALMELKEFKADD 182 >UniRef50_B2JHA3 Transcriptional regulator, RpiR family n=5 Tax=Burkholderiaceae RepID=B2JHA3_BURP8 Length = 335 Score = 113 bits (282), Expect = 8e-24, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 92/271 (33%), Gaps = 18/271 (6%) Query: 25 LLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVP 84 LL QP+ + LA V+ S++ + KLGY GF + ++LA + Sbjct: 64 LLEQPEEVAVRTITDLATALDVNASTLTRLCTKLGYAGFADFQSVFRDSLAHRHRHFYTH 123 Query: 85 IHNQIRG-------------DDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 ++ P V +L E+ + L S + L +L Sbjct: 124 QAQRLVAGKAARMQMSGRGGASPEIDVVAQLAHESIGNVETFLGRLSPDDLRGAAALLAD 183 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSPDDLLLAISYTG 190 A R+ + + +A + L I + A + + + P D+++ S Sbjct: 184 APRVRVHALRQFSSLASFLCYGLGMIRTDVALLDAQGLGVAEGLAQLQPGDVVVVSSVAP 243 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGM 250 R + A G V+AIT + L A H E + ++ A + Sbjct: 244 YTRSVAETAAAAAEAGMTVIAITDTLASPLVPPARHAFLIPHESSFFS----NSMGAYLI 299 Query: 251 LTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + L + + + + + E L+ L Sbjct: 300 FCEGLLNLVATHLGKRSLQALSRRERLITAL 330 >UniRef50_Q3ATD5 KpsF/GutQ n=10 Tax=Chlorobiaceae RepID=Q3ATD5_CHLCH Length = 328 Score = 113 bits (282), Expect = 8e-24, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 76/183 (41%), Gaps = 2/183 (1%) Query: 84 PIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGAS 143 L +G +++++ A+ M+ ++I++G+G S Sbjct: 1 MNTTPQTETATLTGIGRQILEQEAQAIAHIAEHLDHHFAEAIQVMVACKGKVIVSGMGKS 60 Query: 144 GLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEML 203 G++AQ A + G A + A + + +D++L +S +G ELN + Sbjct: 61 GIIAQKIAATMASTGTTALFLHPADAAHGDLGVVAAEDVVLCLSKSGSTEELNFIIPPLR 120 Query: 204 RVGGKVLAITGFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQ 261 ++G K++ +TG + L Q A L T E + A ++ A + D L I L+Q Sbjct: 121 QLGAKIIVMTGNPRSFLAQNADITLNTGVAKEACPYDLAPTTSTTAMLAMGDALAITLMQ 180 Query: 262 QDL 264 Q Sbjct: 181 QKK 183 >UniRef50_Q12C10 Transcriptional regulator, RpiR family n=2 Tax=Comamonadaceae RepID=Q12C10_POLSJ Length = 301 Score = 113 bits (282), Expect = 8e-24, Method: Composition-based stats. Identities = 48/229 (20%), Positives = 94/229 (41%), Gaps = 4/229 (1%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 GL+ + A ++ P S ++ A AG++ +++ + +Q LG+ GF A+K Sbjct: 12 LDGLSPELLRAARWIEAHPREVALHSMRECARRAGLAPATLTRLSQALGFNGFDAIKNLC 71 Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE-KLHECVTML 129 E+ A+Q Q + ++ E A A++ ++ +L + Sbjct: 72 QESFAAQAGYAGRAEVLQASARHSKDWLA--VLNETQHANTASIGGLNQRGQLEAAADAM 129 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASSPDDLLLAISY 188 ARRI G+ AS +A + + + N V+ L + DLL+A+S Sbjct: 130 LKARRIYFLGLRASHGLALHLHYTYGLLASNGVLVQGLGGTLSDQIGEMGRGDLLVAMSL 189 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 R+ A + L G ++ +T + + + A+H L A+ + Sbjct: 190 APYTRQTVDAVAQALGQGVDLMVLTDSALSPIARSAAHTLLFRADSPSY 238 >UniRef50_A3PT11 Transcriptional regulator, RpiR family n=4 Tax=Mycobacterium RepID=A3PT11_MYCSJ Length = 287 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 49/220 (22%), Positives = 91/220 (41%), Gaps = 3/220 (1%) Query: 15 AQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEAL 74 +++++++ LL +A S+ +LA A VS +V++FA LG++GF L+++L + Sbjct: 21 SRAERRVGRALLADYPSAGLASAARLAERADVSPPTVLRFAHSLGFEGFADLQVSLRAEI 80 Query: 75 ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR-SAR 133 ++ P + + PL + + +N A+ TL L V +L R Sbjct: 81 SAMSSGPITRLPDAPAAGSPLDRLLNQARAQNDRAL-ETLAHLPGSSLEAAVALLADQTR 139 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHAL-LATVQASSPDDLLLAISYTGVR 192 + L G S L+AQ+ L ++ + D L + + D+L+ Y + Sbjct: 140 PLFLHGGRFSVLLAQHLGAHLEQLRPGVRLLADPSGRDLGAMMELTRRDVLVLFDYHRYQ 199 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA 232 A R G V+ IT + A L + Sbjct: 200 ASAVDVAARFHRAGAAVVLITDDLACPVAPDAEVVLAASS 239 >UniRef50_UPI000196AA26 hypothetical protein CATMIT_01876 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196AA26 Length = 274 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 36/263 (13%), Positives = 88/263 (33%), Gaps = 8/263 (3%) Query: 2 NGLLRIRQRYQGLAQSD--KKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 N R+ +++D +A ++ + +LA E VS +++ +F + LG Sbjct: 3 NLFYRLMIYLDTASETDTNYFIALFMANNFYRIPDMRISELAEECFVSPATISRFCRALG 62 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 Y+ F LK + ++ + ++ + E+ ++ + + Sbjct: 63 YENFAHLKQECNSFHSNNKKFNNLINIDLECMAHSPEKATEEFAQQIIESTKEISKILDW 122 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L E + ++ + G S A L+ + A D L + + Sbjct: 123 KILDEVLHLIHDHEEVAFFGTQFSTSAAILLQTDLLMLEKFTIAYMDSERQLECAKQMTE 182 Query: 180 DDLLLAISYTGVRREL-NLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D + + IS G + + + + ++ IT + L + + + Sbjct: 183 DSVAIVISLNGNFEHVGHKVLQYLHKSKCHIVWITSTHEDNLGIPVEYKVLVGG-----S 237 Query: 239 SASISACHAQGMLTDLLFIALIQ 261 + + HA L+ + Sbjct: 238 LENKTTKHALLTAVQLMSLRYYS 260 >UniRef50_D1S1T7 Transcriptional regulator, RpiR family n=3 Tax=Actinomycetales RepID=D1S1T7_9ACTO Length = 281 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 98/267 (36%), Gaps = 20/267 (7%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L + +++A L+ A +LS+ ++A AGVSQ SV +FA LG+ G+PAL+ L E Sbjct: 20 RLTPTQRRIAHCLVRHAGAAAYLSAAEVAELAGVSQPSVTRFAMALGHDGYPALRRRLRE 79 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN-SEEKLHECVTMLRS 131 + P+ ++ + + ++ E +L + Sbjct: 80 LTVTGSAGPAAG------------NALQRAVHAERDNLDRLAAQLADAGRVAEVGKLLAA 127 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL---ATVQASSPDDLLLAISY 188 +R + + G+ A+ +A FA+ K+ + + D ++L ++ +LA Sbjct: 128 SRPLPVLGLRAAAPLAAYFAYFAAKVHPDVRVLDDGGSMLVDRLDQAVAAGATAMLAFVL 187 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 RE A E G V+AIT + + A L + Sbjct: 188 PRYPRETLDALREARDAGLTVVAITDSPVSPATEHAEVVLPAAVGADLVFDLHTAPMTLA 247 Query: 249 GMLTDLLFIALIQQDLELAPERIRHSE 275 ++ + A R+ E Sbjct: 248 MVVLQAICDA----APAETQNRLEAFE 270 >UniRef50_D1TFW4 Putative transcriptional regulator, RpiR family n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TFW4_9BURK Length = 302 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 41/298 (13%), Positives = 83/298 (27%), Gaps = 24/298 (8%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + R+ L + K++A Y+L D ++ Q+A +AG S SV +F + +GY+ Sbjct: 5 FAQTVEARFAELTPTSKRVASYMLANLDRLGLETADQIAQQAGTSGISVGRFLRSVGYRN 64 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPL-----------------RLVGEKLIKE 105 LK L + D + ++ Sbjct: 65 LDDLKRELRGTQQRPWLITDRLDAFRRGPSDSTQAGEPHEPDVADGASPRDATLAQSLEL 124 Query: 106 NTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR 165 A+ + + +A + + GI ++ ++ F L + Sbjct: 125 EIGAIQHVYELARSPAFARVAERIANADAVYILGIQSTRGISNAFYSYLEYLRPRVFYSD 184 Query: 166 DMHALLATVQASS-PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRA 224 M S L+ R G +T + Sbjct: 185 GMSGSYVDSLNSEFSTPYLIVTDTRAYSTIARRYCQAASRRGLPFALVTDIY-CPWARDF 243 Query: 225 S-HCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 L + + L +LL A++++ ER+ + L + Sbjct: 244 DGDLLQVKTDVGQFWD----SLAPLTCLFNLLISAVVERRGPAIDERVARNRELQSEF 297 >UniRef50_Q10ZT6 KpsF/GutQ family protein n=1 Tax=Trichodesmium erythraeum IMS101 RepID=Q10ZT6_TRIEI Length = 324 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 68/183 (37%), Gaps = 2/183 (1%) Query: 92 DDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFA 151 ++ + +I++ +A+ + L + + +++++GIG SG ++Q A Sbjct: 4 HKSIKQQLKSVIEQEISAISKLCESIDDSWLKAVLRLRDCKGKLVVSGIGKSGSISQKIA 63 Query: 152 WKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLA 211 G A + A + D+LL +S +G EL R+ ++ Sbjct: 64 ASFTSTGIPAIFIHPTEASHGDLGLLDSSDILLVLSASGQTSELLDIMQYASRLKSSIIL 123 Query: 212 ITGFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDLELAPE 269 IT ++L A L E A + Q +L D L + L+ + + Sbjct: 124 ITKNPNSSLAHFADIILQIPDLPEACINGLAPTISTTCQLVLGDALVVTLMSLRGFTSED 183 Query: 270 RIR 272 + Sbjct: 184 FKQ 186 >UniRef50_B8CZC0 KpsF/GutQ family protein n=4 Tax=Bacteria RepID=B8CZC0_HALOH Length = 331 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 40/169 (23%), Positives = 75/169 (44%), Gaps = 4/169 (2%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILT-GIGASGLVAQNFAWKLMKI 157 K+++ ++ + + + V ++ ++ ++ GIG SGL+ Q A Sbjct: 19 ARKVLEIEAYSVLKLKDSI-GSEFADIVRVILESKGRVIFTGIGKSGLIGQKLAATFSST 77 Query: 158 GFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTP 217 G A V AL + + DD+++AIS +G E+ + R+G ++A+TG Sbjct: 78 GTPAFFVHAGEALHGDLGMVTGDDIIIAISNSGETEEVLSLVPSIRRIGAFLIAVTGNRS 137 Query: 218 NALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQDL 264 + L + A++ L EE+ A ++ A L D L IAL + Sbjct: 138 STLARYANNHLLVNIEEEACPHGLAPTASTTATLALGDALAIALSKLKG 186 >UniRef50_A3VSH4 Arabinose 5-phosphate isomerase n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VSH4_9PROT Length = 327 Score = 112 bits (280), Expect = 1e-23, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 59/167 (35%), Gaps = 2/167 (1%) Query: 100 EKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF 159 ++ A++ + + ++ ++TG+G SG + + A G Sbjct: 15 RAVLTTEANALHTLGEQLDDAFAAAVRHLTATSGFTVVTGVGKSGHIGRKMAATFASTGT 74 Query: 160 NAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNA 219 + V A + P +L+AIS +G REL R ++A+T + Sbjct: 75 PSFFVHPTEASHGDLGMLDPKGVLIAISNSGETRELRDILLYANRRHVPLIAMTARPDSF 134 Query: 220 LQQRASHCLYTI-AEEQ-ATNSASISACHAQGMLTDLLFIALIQQDL 264 L +RA L E A S+ L D L +A + Sbjct: 135 LAKRAEVTLLLPRTPEACPNGLAPTSSTTMTLALGDALAVAAMTARG 181 >UniRef50_A4NYS2 N-acetylneuraminate lyase n=2 Tax=Haemophilus influenzae RepID=A4NYS2_HAEIN Length = 148 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 44/135 (32%), Positives = 71/135 (52%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L +I YQ L +S+KK+AD +L PD S ++A V ++++V+F + +G+K Sbjct: 6 NVLNKIGSLYQSLTKSEKKIADTILRSPDLVSQCSLSEIAKHLQVGEATLVRFCRTIGFK 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF KL LS LA++ + +I D + +KL M T+N+ ++ Sbjct: 66 GFSEFKLELSIELATKDNQDESILETEIMPSDDSLTIAQKLQTAVANVMEETINLLDLKQ 125 Query: 122 LHECVTMLRSARRII 136 L E V +L+ ARRI Sbjct: 126 LEEVVKVLKKARRIF 140 >UniRef50_A0B0Z7 Transcriptional regulator, RpiR family n=68 Tax=Proteobacteria RepID=A0B0Z7_BURCH Length = 295 Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 43/285 (15%), Positives = 86/285 (30%), Gaps = 21/285 (7%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 + R+ L + K++A Y+L D ++ Q+A + G S SV +F + +GY+ L Sbjct: 9 VESRFAELTPTAKRIASYMLANLDRLGLETADQIAQQTGTSGISVGRFLRSVGYRNLDDL 68 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEK-----------LIKENTAAMYATLN 115 K L +P + + R VGE+ ++ A+ Sbjct: 69 KRELRGG-GDRPWMITDRLDEYRRATATPTTVGERDGHRDGGTLASSLERELDAIRHVYR 127 Query: 116 VNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQ 175 + E + + A + + GI ++ ++ F+ L + Sbjct: 128 LAEEPVFAQVADRIAHADAVFILGIQSTRGISNAFSSYLEYLRPRVFYSDGQSGSYVDSL 187 Query: 176 ASS-PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQR--ASHCLYTIA 232 S + R G +T + A L Sbjct: 188 NSEFERPYCIVTDTRAYSRSARRYCQAAAERGQPFALVTDLY-CPWAREWPADL-LQVKT 245 Query: 233 EEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + + L +LL A++ + R+ + L Sbjct: 246 DVGQFWD----SLAPLTCLFNLLITAVVDRLGPAIDRRVARNREL 286 >UniRef50_A3K9H4 Putative uncharacterized protein n=1 Tax=Sagittula stellata E-37 RepID=A3K9H4_9RHOB Length = 275 Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 91/236 (38%), Gaps = 6/236 (2%) Query: 15 AQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEAL 74 + +++K+A L T + + LAN AGVS +V+++ KLG+ F + A+ + L Sbjct: 7 SGAERKVAAALSETFPTGALGTVEVLANRAGVSGPTVLRYVNKLGFSRFADFQAAVMQEL 66 Query: 75 ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR- 133 Q SP+V + D + + + A+ + + V +L + Sbjct: 67 DRQLGSPAVQMATPSEPQDGGEHLYRRTLLMQAEALRRVADRAVPAEFDRIVDLLTDPKL 126 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASSPDDLLLAISYTGVR 192 I G S +AQ L ++ + + + P DLL+ Y + Sbjct: 127 TIRALGGRYSRNLAQRLVLHLGQVRTQVSLIERPLGFAFDPLVDIGPRDLLVVFDYRRYQ 186 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 ++L A G +++ +T + + + + A L + E + ++ Sbjct: 187 QDLMAFAKAAWGQGARIVLLTDLSRSPVAELAEAVLISPDESPS----PFASRVVA 238 >UniRef50_A4GJ53 Putative KpsF/GutQ n=1 Tax=uncultured marine Nitrospinaceae bacterium RepID=A4GJ53_9DELT Length = 338 Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 72/178 (40%), Gaps = 3/178 (1%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWK 153 + K++ + A+ N ++ V L + +++TG+G SGL+ + + Sbjct: 21 SIIETARKVLDIESLAIAELGNRID-DQFVNVVHHLNQCKHLVITGVGKSGLIGKKISST 79 Query: 154 LMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 IG + + A + S D ++AIS +G E+ R+ ++ +T Sbjct: 80 FSSIGLPSLFLHASEASHGDLGMISEGDTVIAISNSGETDEVVKLLPIFNRIKCTLVGMT 139 Query: 214 GFTPNALQQRASHCLYTI--AEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPE 269 G ++L +R+ + L E + + ++ A + D L +A ++ + Sbjct: 140 GNMQSSLAKRSDYVLDVSVKVEACSKDLVPTASTTATLAMGDALAMAFMELRGVQEED 197 >UniRef50_A8GDB9 Transcriptional regulator, RpiR family n=1 Tax=Serratia proteamaculans 568 RepID=A8GDB9_SERP5 Length = 237 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 81/230 (35%), Gaps = 30/230 (13%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN Q L+++D + + +L PD + L+ S S+VV+ A+KLG+ Sbjct: 1 MNFKQVFSQA--DLSKTDLAILNCILDNPDACIDEGIRALSARCYSSPSTVVRLAKKLGF 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +G+ L + LA P + + + E Sbjct: 59 RGYLELVYFIKFNLAMAPAYLAEKSAPVAVSVQQQAQFLD---------------LLDE- 102 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +I++ G G S LVAQ K M +G ++ + + Sbjct: 103 ------------GKILIHGSGFSQLVAQYMYNKFMTLGIDSYLSLWPDFDILDRETRFRF 150 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT 230 ++++ IS +G ++ + R ++ A G + L Q+A Sbjct: 151 NMVIVISKSGNSGSALNWSEAVKRNDIRLAAFCGDGDSPLAQQADMSFIY 200 >UniRef50_Q8EWN1 Transcriptional regulator n=1 Tax=Mycoplasma penetrans RepID=Q8EWN1_MYCPE Length = 281 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 59/271 (21%), Positives = 119/271 (43%), Gaps = 9/271 (3%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 ++YQ L + +K L + P + ++ S+SS+ + +QK+G+K +KL Sbjct: 11 EKYQNLNEIEKDLLKKINENPIQFLDNNIIDISKSFYSSKSSISRLSQKIGFKHLSDMKL 70 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 +S LA Q ++N + + L N A+ TL+ + + Sbjct: 71 YISGKLAMQD------LYNLDKEESNTESRIRNLRTYNIFAINETLSNINISDIKNICAN 124 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + +R++I G+G+S L AQ + ++K+G N+ ++ D+H LL + ++ DLL+ S Sbjct: 125 IIKSRKVICYGLGSSFLAAQELSQNMLKLGINSISINDIHNLLLALSSADKSDLLVLFSK 184 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 +G +E++ + + VL IT + R + + + + S+ Sbjct: 185 SGTNKEISYSIKVCNELNIDVLLITCNK--EVANRVKYKIIMEDIWKDKRLIATSSKTCM 242 Query: 249 GMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++DLL+ L E A + + L+ Sbjct: 243 LAISDLLYYELYY-MTETADRNLEKANNLLN 272 >UniRef50_B9KF21 Arabinose-5-phosphate isomerase n=29 Tax=Bacteria RepID=B9KF21_CAMLR Length = 318 Score = 111 bits (277), Expect = 3e-23, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 71/172 (41%), Gaps = 2/172 (1%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWK 153 + +++ + + + + +EE +L R +++G+G SG V A Sbjct: 5 DAIKIAKEVFEIESKTILDLCDTLNEEFSKAVELILSIKGRCVVSGMGKSGHVGAKIAAT 64 Query: 154 LMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 L G + + AL + + +D+LLAIS +G E+ + + ++ + Sbjct: 65 LASTGTPSFFMHPGEALHGDLGMIASEDVLLAISNSGETEEVLKLIPVIKKRKIPLIVMA 124 Query: 214 GFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQD 263 G + L ++A + +++ A S+ A + D + +AL++ Sbjct: 125 GDQNSTLAKQADVFINIAVKKEACPLQLAPTSSTTATLAMGDAIAVALMKAR 176 >UniRef50_A4VW77 Transcriptional regulator n=1 Tax=Streptococcus suis 05ZYH33 RepID=A4VW77_STRSY Length = 189 Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 74/179 (41%), Gaps = 2/179 (1%) Query: 96 RLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLM 155 R + +K++ + + AT + EEKL E ++ S++R+ GIG+SGLVA + M Sbjct: 10 RSLAKKVLVDYEEILTATNKLVDEEKLEEIAKLIDSSKRVYFYGIGSSGLVAMEIKSRFM 69 Query: 156 KIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGF 215 ++G A+ D + L+ T L++ +S +G E+ + G +T Sbjct: 70 RLGVVCDAITDENNLIWTTNILDDSCLVIGLSLSGQTEEVMEHLQLAAQKGIPTALLT-- 127 Query: 216 TPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 T + + + IS ++ D+++ + D E + + Sbjct: 128 TRSFPHPTFDQIIPVASVRHLNYGNRISPQIPLLIMLDIIYAYFLAIDKEKKENIFKQT 186 >UniRef50_C6I0S8 Sugar isomerase, KpsF/GutQ family protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I0S8_9BACT Length = 333 Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 68/169 (40%), Gaps = 2/169 (1%) Query: 97 LVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMK 156 ++++E + A+ L +L + ++ +TGIG SG +A+ + Sbjct: 14 ETARRVLEEESQAIRDLLPRIDSSFAEAVGAILDNPGKLAVTGIGKSGHIARKVSATFSS 73 Query: 157 IGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT 216 G A + AL + D+LLA S +G E+ + R+ V+AI G Sbjct: 74 TGTPAFFLHPGEALHGDLGMLESRDILLAFSKSGETEEILALLPLLGRMEVPVIAIVGNK 133 Query: 217 PNALQQRASHCL--YTIAEEQATNSASISACHAQGMLTDLLFIALIQQD 263 + + ++A+ L E A S+ A + D L + ++ + Sbjct: 134 ASTIAKKATWALSAEVSHESGPLGIAPTSSTTAMLAMGDALAMTVLSER 182 >UniRef50_B0BZZ6 Sugar isomerase, KpsF/GutQ family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0BZZ6_ACAM1 Length = 334 Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 74/174 (42%), Gaps = 3/174 (1%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM-LRSARRIILTGIGASGLVAQNFAW 152 +KL+ A+ + E++++ V + + + +++L+G+G SG+VA+ A Sbjct: 11 TFASQVDKLLLLEAEAIAKAADRLQPEQVNQAVDLMINCSGKVVLSGVGKSGIVARKIAA 70 Query: 153 KLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAI 212 L +G A + + AL + + D+++ +S +G EL + + ++A+ Sbjct: 71 TLTSVGVMAVFLHPVEALHGDLGIVATTDVVVVLSNSGETDELIAMLPCLKQRQVPLIAL 130 Query: 213 TGFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQDL 264 G + L A L +++ N A ++ + D L + + Sbjct: 131 VGNVNSTLADEADVVLAATVDQEACPMNLAPTASTTVAIAIGDALAMTVTHAKG 184 >UniRef50_Q2RYH6 KpsF/GutQ n=64 Tax=Proteobacteria RepID=Q2RYH6_RHORT Length = 366 Score = 110 bits (275), Expect = 6e-23, Method: Composition-based stats. Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 2/142 (1%) Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYT 189 + + ++I++G+G SG VA A L G + V A + D ++A+S + Sbjct: 87 KRSGKVIISGMGKSGHVAAKIAATLASTGTPSFFVHPAEASHGDLGMIGRSDAVIALSNS 146 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI--AEEQATNSASISACHA 247 G EL R+G +++ITG P+AL A L E A ++ A Sbjct: 147 GETPELADMVAYTRRMGIPLISITGRHPSALSDAADVALVLPALTEACPHGLAPTTSTTA 206 Query: 248 QGMLTDLLFIALIQQDLELAPE 269 L D L +AL+++ A + Sbjct: 207 MMALGDALAVALLERRGFTASD 228 >UniRef50_D0LJS5 KpsF/GutQ family protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LJS5_HALO1 Length = 334 Score = 110 bits (274), Expect = 7e-23, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 67/183 (36%), Gaps = 2/183 (1%) Query: 84 PIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGAS 143 + D ++ +E AA+ + + +++ G+G S Sbjct: 13 HASPNLESRDARVEQAREVFREQAAAIADLGQRIDASFTRAIELLRTTPGHVVICGMGKS 72 Query: 144 GLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEML 203 GL+ Q A L G + V A + + + ++ +SY+G E+ + Sbjct: 73 GLIGQKIAATLASTGTPSFFVHPAEAYHGDLGMITAQNTVMLLSYSGETEEVVRLLPHLQ 132 Query: 204 RVGGKVLAITGFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQ 261 R+ ++ + G + L ++ L E + N A S+ A + D L ++LI Sbjct: 133 RMRVPLIGLVGRLDSTLARQVDVALDVSVEREACPNNLAPTSSTLAALAMGDALAVSLIH 192 Query: 262 QDL 264 + Sbjct: 193 ERK 195 >UniRef50_Q3JP70 Arabinose-5-phosphate isomerase n=5 Tax=Proteobacteria RepID=Q3JP70_BURP1 Length = 351 Score = 109 bits (273), Expect = 9e-23, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 71/197 (36%), Gaps = 2/197 (1%) Query: 70 LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTML 129 + S+ ++ + A+ + S+ +L Sbjct: 21 VRRCAPQYSPPFSMAHDGSQMNHHNYLDSARQVFDIESRALASLSARVSDSFGDAVDAIL 80 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYT 189 RS+ R+++ G+G SG++ + A G + + A + + D LAISY+ Sbjct: 81 RSSGRVVVCGMGKSGIIGRKIAATFASTGTPSFFMHPGEAYHGDLGMVTSADTFLAISYS 140 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ--ATNSASISACHA 247 G E+ + ++A+TG + L Q A L E++ A S+ A Sbjct: 141 GETDEVIKLIPFLKSNRNYLVALTGNARSTLAQAAHSHLDAGVEQEACPLQLAPTSSTTA 200 Query: 248 QGMLTDLLFIALIQQDL 264 + D L + L++ Sbjct: 201 ALAMGDALAVTLMKARG 217 >UniRef50_Q6AQ42 Related to polysialic acid capsule expression protein (KpsF) n=1 Tax=Desulfotalea psychrophila RepID=Q6AQ42_DESPS Length = 327 Score = 109 bits (273), Expect = 9e-23, Method: Composition-based stats. Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 2/175 (1%) Query: 97 LVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMK 156 +K+++ + A EE L ++ R+++TGIG SG+V Q + L Sbjct: 8 EAAKKVLEIEEQGLAAVRENIGEEFLAAVEAIVNCPTRLVITGIGKSGIVGQKISATLNS 67 Query: 157 IGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT 216 IG ++ + + AL + D++LAISY+G ELN + G ++ +TG Sbjct: 68 IGTSSFFLHPVEALHGDLGMVMATDVVLAISYSGETAELNGLLRSLKARGNTIIGMTGGA 127 Query: 217 PNALQQRASH--CLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPE 269 + L + + AE A ++ A L D L + L+ + A + Sbjct: 128 KSTLAMASDIFLNIRIPAEACPLGLAPTTSTTATMALGDALGVVLLNRKQFKAED 182 >UniRef50_C2FAJ3 RpiR family transcriptional regulator n=1 Tax=Lactobacillus paracasei subsp. paracasei ATCC 25302 RepID=C2FAJ3_LACPA Length = 252 Score = 109 bits (273), Expect = 9e-23, Method: Composition-based stats. Identities = 54/263 (20%), Positives = 110/263 (41%), Gaps = 17/263 (6%) Query: 1 MN-GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 MN +I + Y+ L+ +++ + D+++ L + + + VS ++V++ A+KLG Sbjct: 1 MNTFFEQIARHYETLSSNEQLVIDFVMRD-HNIDRLKIKTITDALFVSSATVMRAARKLG 59 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 Y F LK + + Q + I G T+ TL + SE Sbjct: 60 YSNFSQLKYSAAMTQDEQAAPLPSEDFDTITG-------------RITSEFDKTLQMLSE 106 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E + E V L ARRI G G+S V +F KL + + +++++ + Sbjct: 107 ENVAEFVEHLNHARRIFCVGSGSSVSVVGDFTRKLKLLDYWINDFNELYSIRDIAGLAEA 166 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD+++ +S G +N G K+++ITG +++ + + + E Sbjct: 167 DDVIVILSLGGGNHLVNQFLVRAKATGAKIISITGIGADSVAKFSDCNILVYQEAVP--R 224 Query: 240 ASISACHAQGMLTDLLFIALIQQ 262 + + + D++F ++ Sbjct: 225 KRMRSRLMLNVAIDIIFEYILSH 247 >UniRef50_C4XDS0 Putative uncharacterized protein n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XDS0_MYCFE Length = 267 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 103/251 (41%), Gaps = 5/251 (1%) Query: 8 RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALK 67 ++ + + L ++ P S Q+ + VSQSS+ +F + LG++ + L+ Sbjct: 10 KKLVENYKDTYSYLIKWIEENPHEFLACSQHQITEKIYVSQSSLSRFTKFLGFESYRELQ 69 Query: 68 LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 + ++ + E +I + K+ ++ A N ++ + V Sbjct: 70 IYVAR----KVEQFLPNETYKIDEIKDAKDCILKVFQQYQNISKAGFNTIETIQIEKLVN 125 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL-LAI 186 L +++I+ GIG SG++ A +L +IG + + +H S+ DD+ + I Sbjct: 126 NLIKYKKLIIFGIGTSGIIGSYLAKQLTRIGIISVCINSIHDFKDAYNESNKDDVFYIII 185 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S + E+ AA+ + + +T + S +Y Q + I + Sbjct: 186 SKSFKNHEVKEAAEILDKSNFNFQILTRNENVSYANCTSPIIYDYIPAQKNFNYDIVSKL 245 Query: 247 AQGMLTDLLFI 257 + ML D+++I Sbjct: 246 SLFMLIDIIYI 256 >UniRef50_C2BS39 Glutamine--fructose-6-phosphate transaminase, isomerizing n=5 Tax=Actinomycetales RepID=C2BS39_9ACTO Length = 669 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 42/219 (19%), Positives = 73/219 (33%), Gaps = 8/219 (3%) Query: 70 LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYAT-------LNVNSEEKL 122 +++ A + + V + EK I+E A+ T + ++L Sbjct: 281 IAQDPAQRKRAYEVDFATDRVTKEGFDTFMEKEIREQPRAVGDTVAGRLDAAEALTLDEL 340 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + RS +I+ G + Q + + V H S L Sbjct: 341 RIESEVFRSITSVIIVACGTASYAGQVARYAIEHWCRIPCEVELAHEFRYRDPVVSRRTL 400 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++AIS +G + +A G +VLAI + + + A L T A AS Sbjct: 401 VVAISQSGETMDTIMAIRHAREQGARVLAIVNTPGSTISREADAVLLTHA-GPEIAVAST 459 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 A AQ LL + L Q + I + ++ Sbjct: 460 KAFTAQIAACYLLGLYLAQVRGNKYADEIEDYLEKLGQM 498 >UniRef50_A6NTR6 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A6NTR6_9BACE Length = 324 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 69/168 (41%), Gaps = 2/168 (1%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG 158 +L A+ + + + L ++ ++I+TG+G G + A + +G Sbjct: 12 ARRLFDTEIRALESVRDSLDQRFLDILEQIVNCRGKVIITGMGKPGHIGTKIAATMASLG 71 Query: 159 FNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPN 218 A + AL + DD++LAISY+G E+ + +G ++ I+G + Sbjct: 72 TPAFYLHPAEALHGDLGMVGADDVVLAISYSGESDEVIRLIPSLKLIGATLIGISGNADS 131 Query: 219 ALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQDL 264 L + + + E+ + A S+ A +L D L + ++ Sbjct: 132 TLIRFSDYSFVFPPFEEACHMHLAPTSSTTAALVLGDALAVCASERYG 179 >UniRef50_A0LE58 KpsF/GutQ family protein n=8 Tax=Bacteria RepID=A0LE58_SYNFM Length = 357 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 39/172 (22%), Positives = 76/172 (44%), Gaps = 2/172 (1%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWK 153 + + +++ + + L+ SE + + + RII+TGIG SG+V + Sbjct: 35 GILEIAADVLRIESEGILHLLDHISESFARAVLWIYEAGGRIIVTGIGKSGIVGRKIVAT 94 Query: 154 LMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 L G A + + A+ + D++LA+S +G ELN+ + +G +++A T Sbjct: 95 LSSTGTPALFIHPVEAMHGDLGMVRAGDIVLALSNSGETDELNIILPSLKNIGTRIIAFT 154 Query: 214 GFTPNALQQRASHCLY--TIAEEQATNSASISACHAQGMLTDLLFIALIQQD 263 G T + L Q + +Y E ++ A + D L +AL++ Sbjct: 155 GDTSSTLAQYSDLTVYTGVPREACPMGLVPTASTTAMLAMGDALAVALLRLR 206 >UniRef50_Q14NM0 Hypothetical transmembrane protein n=1 Tax=Spiroplasma citri RepID=Q14NM0_SPICI Length = 280 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 48/285 (16%), Positives = 113/285 (39%), Gaps = 17/285 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + + L +L + L + L+ +LA+ ++ S++ + +KLG+ Sbjct: 1 MKIIT--YDKENQLTDLQIQLIEKLNNDIQSVLELTINELADNLFINTSTLSRLIKKLGF 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + + K+ ++ + ++ + + L + + + K NT A+ T Sbjct: 59 ENYSKFKVWVA------GKYNNIKKFDIQENETTLHNIIDNIYKLNTYALDETYRNLKVN 112 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L + + + + RI++ GI L+ +N L + +N+ + + +A + ++ S + Sbjct: 113 QLEKIIDTIHDSERIVIWGISRHTLICENLNLHLNVLKYNSTYLVNYYATIQLIETLSEN 172 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNA----LQQRASHCLYTIAEEQA 236 DLL+ IS + E + D + K++ +T LQ+ L E Sbjct: 173 DLLILISKSLQDAEYHFLIDIATKRNVKIILLTINKEYKGPPNLQK-----LTLENTEIL 227 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++ ML +++F LI + E + + + Sbjct: 228 NFYVDNPHYVSRLMLINIVFGMLIAKYHPTHNEEYKDYYTAIDEW 272 >UniRef50_A1VGM9 KpsF/GutQ family protein n=1 Tax=Desulfovibrio vulgaris DP4 RepID=A1VGM9_DESVV Length = 339 Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 62/170 (36%), Gaps = 2/170 (1%) Query: 97 LVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMK 156 ++++ A+ + + RI +TG+G SG V + A L Sbjct: 29 NFAASVLQQEAHALTLLARGLDTSFCDAVDCLYGISGRIAVTGMGKSGHVGRKVAATLAS 88 Query: 157 IGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT 216 G A + A + +D +LA S +G EL+ R G ++ +T + Sbjct: 89 TGSPAYFIHPSEASHGDLGMLVSNDAVLAFSNSGNTAELSDIILYSARRGIPLIGVTRNS 148 Query: 217 PNALQQRASHCLYTI-AEE-QATNSASISACHAQGMLTDLLFIALIQQDL 264 + L + ++H L E A ++ Q L D L + L+ Sbjct: 149 DSLLGKHSTHLLLLPLVPEADPLGCAPTTSTTLQMALGDALALTLMCHRG 198 >UniRef50_Q041A4 Transcriptional regulator n=8 Tax=Lactobacillus RepID=Q041A4_LACGA Length = 227 Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats. Identities = 39/265 (14%), Positives = 91/265 (34%), Gaps = 42/265 (15%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN I +++ L ++K+ Y+ + ++++ ++LA S S +VK +K+ Sbjct: 1 MNI-QTISEKF-QLNTDEQKILIYMNQHRNEIKNINIRELAKRTFTSPSFIVKTCKKMKL 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ L +++A + + P + +K Sbjct: 59 SGYSELVFLIADAPNFPNNTENDLKVE--SYVKPFSNLMDKHKDSMI------------- 103 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ G G S +A + L GF + + L + Sbjct: 104 ---------------MILGSGYSQNIANYMSEYLNLNGFRCTSNSHLEMLRKH-----KN 143 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 L++ IS +G + L + + V++ TG + + + ++ + N Sbjct: 144 TLIIIISNSGETKRLAELCIQAQKNNRDVISFTGDKNSTIAKHSTLAI----SSDTFNPT 199 Query: 241 SISACHAQGML-TDLLFIALIQQDL 264 S + + Q L++ L+ + Sbjct: 200 SFDSHYPQLFFGLTLIYFELLMSNF 224 >UniRef50_Q6MPN9 Polysialic acid capsule expression protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MPN9_BDEBA Length = 326 Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 71/175 (40%), Gaps = 4/175 (2%) Query: 101 KLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILT-GIGASGLVAQNFAWKLMKIGF 159 K+++ A+ A + + V M+ + I+ G+G SG +A+ A G Sbjct: 10 KVLEVEAQAILALKERL-GDSFEQVVKMITACDGKIVLTGMGKSGQIARKLASTFSSTGT 68 Query: 160 NAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNA 219 A + + + +D+++A+SY G E + R G ++AITG ++ Sbjct: 69 PAVFLHPAESSHGDLGLVENNDVVIALSYGGESPEFAGILRFVSRKGIPLIAITGKPESS 128 Query: 220 LQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQDLELAPERIR 272 L + A L E+ A ++ A + D + +A++ + + + Sbjct: 129 LAKAAQVTLNVHVSEEACPLGLAPTASSTATLAMGDAVAMAVMAEKGFSSEDFAE 183 >UniRef50_B6G7Y4 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G7Y4_9ACTN Length = 277 Score = 108 bits (271), Expect = 1e-22, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 94/267 (35%), Gaps = 11/267 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L I Q ++ ++A +L D + +S Q+A+ VS++SV +F + LGY+ Sbjct: 7 KLLSYIDTSMQR--DNNYQIAVKMLENYDALKDMSIAQIADMCYVSKASVSRFCRFLGYE 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F + AL P S +E + AT++ + + Sbjct: 65 SFKEMHDALGIDY---PISYDYSQRFFCNLTADPHAAFLDYAREAQQNIAATISEKNLAE 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + + + R+ + KL +G D + LA ++ +D Sbjct: 122 LPKIAYAIHNCCRVAFFSHHFLWDTGRYLQNKLFSMGKVMDLHLDQASQLACARSLQSED 181 Query: 182 LLLAISYTGVRRE-LNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 L + S G + + VLAIT T N +A+ + ++A Sbjct: 182 LAIICSVGGSYPMRYVDVCNSIRDSKCSVLAITQNTSNPYWNQATFIMQCG-----ESNA 236 Query: 241 SISACHAQGMLTDLLFIALIQQDLELA 267 + + + DL+ + Q A Sbjct: 237 NDTGKYGALAAIDLVVQQYLLQYGSDA 263 >UniRef50_C6AWU1 Transcriptional regulator, RpiR family n=11 Tax=Rhizobium/Agrobacterium group RepID=C6AWU1_RHILS Length = 284 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 47/277 (16%), Positives = 107/277 (38%), Gaps = 8/277 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + ++RQ + +++++A Y + ++ +A+ +S +V +F + LGY+ Sbjct: 3 DFVQKLRQYAKTGTPAERRIAKYFTEHLNDLPFETAASVADRLDLSPMTVGRFLRSLGYQ 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G ++K+ + E + + P + + + L+ E A++ ++ ++ Sbjct: 63 GLDSVKVEIRETVTTSPAQLQSAMSELHADAAEGKPLA-VLVAEQIQALHHIYHLTAQPH 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLM--KIGFNAAAVRDMHALLATVQASSP 179 E V ++ +AR + + +A +F +L + G D + + Sbjct: 122 WSEAVGLISTAREVSIATHARLASLANHFCQRLTQARDGVRTLDAADNRFAELFARLAVD 181 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D LL+ I + A R G KV+ I+ + + +++ L + Sbjct: 182 DALLVIIDCRRFAKARL-LARTARRYGYKVVLISPQQADWMADQSNVMLPLP----PARA 236 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + L D L ++I Q E A R R Sbjct: 237 PDLDNLPPLIALLDCLSESVILQVGEEAALRRRRMME 273 >UniRef50_P45313 Probable phosphosugar isomerase HI1678 n=43 Tax=Bacteria RepID=Y1678_HAEIN Length = 337 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 70/173 (40%), Gaps = 4/173 (2%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAW 152 + + + + A+ + ++ + ++ + R+++ GIG SGL+ + Sbjct: 28 NYLKIAQDSLSVESNALLQLSQRL-GDDFNQVIDLILACEGRLVIGGIGKSGLIGKKMVA 86 Query: 153 KLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAI 212 G + + A + P D+++ ISY+G ++N + G K++A+ Sbjct: 87 TFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGETDDVNKLIPSLKNFGNKIIAV 146 Query: 213 TGFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQD 263 T + L + A + L E + N A ++ L D L ++LI Sbjct: 147 TSNKNSTLARHADYVLDITVEREVCPNNLAPTTSALVTLALGDALAVSLITAR 199 >UniRef50_Q6XYV4 Transcriptional regulator n=2 Tax=Spiroplasma RepID=Q6XYV4_SPIKU Length = 271 Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats. Identities = 42/266 (15%), Positives = 102/266 (38%), Gaps = 18/266 (6%) Query: 2 NGLLRIRQ-RYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 + L ++ + + + ++ Y+ + + LA + S++ +K+ Sbjct: 3 SFLSKLETFDSKNFTKKENEIIKYIKENMKEVTTKNIEVLAQQVNTGYSAIYGLLRKMQI 62 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ +A++ + + + + + +K + + E Sbjct: 63 NGYRDFLIAIAADIEIKS-----------LDFENMESLMKK---TYFDILNQNDTMIDNE 108 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA-SSP 179 K+++ + ++ A RI + G+G++ ++Q A +L + GFNA + + L + Sbjct: 109 KVNQTINAIKGAYRIFVIGMGSTNALSQTLALELYRFGFNAFNLNENEEDLMVRSRIMNK 168 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRAS--HCLYTIAEEQAT 237 +DL+LA S G +N A G ++ I+G + + A+ H + T + Sbjct: 169 NDLILAYSLFGDNESVNKALTIAKEKGVTIVVISGKDMSKAVKLANLSHIISTPNQRVND 228 Query: 238 NSASISACHAQGMLTDLLFIALIQQD 263 + ++ TD L + D Sbjct: 229 HKIYVNKLLPWMYFTDDLINKVWSSD 254 >UniRef50_A1RA62 Putative SIS (Sugar ISomerase) domain protein n=1 Tax=Arthrobacter aurescens TC1 RepID=A1RA62_ARTAT Length = 265 Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 96/263 (36%), Gaps = 9/263 (3%) Query: 20 KLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPE 79 ++ L QP A + S +A A + S+V + AQ LG+KG+ + L + Sbjct: 2 QVIGILRSQPRLASYGSVSDIAAVAASNASTVTRTAQTLGFKGWADFQFELRSRFLASLS 61 Query: 80 SPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTG 139 + V + + + + + A + E LH + AR+ + Sbjct: 62 AVEVAAE----HNGHVSSPAQAAVSTDRANLAHFERTLDAETLHNIAKAIAGARQTFIVA 117 Query: 140 IGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSPDDLLLAISYTGVRRELNLA 198 G+ + + + G+N + D+ AL + +DL++AIS V A Sbjct: 118 AGSYAIPGKALEHNAIIAGYNVRLLDADVAALTNAIARLGAEDLVIAISLWRVYDSTMRA 177 Query: 199 ADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIA 258 + +G +++IT + + A H + E + + + + Sbjct: 178 VEIAHNLGTPIVSITDSAGSPVAVHADHRIVVPTE----GAGFFPSLTGAVAAVQAIAVE 233 Query: 259 LIQQDLELAPERIRHSEALVKKL 281 L D E + + I SE ++ Sbjct: 234 LASLDRERSNQNIAASERTWDQM 256 >UniRef50_B0VH11 Carbohydrate isomerase, KpsF/GutQ family n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VH11_9BACT Length = 322 Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 69/173 (39%), Gaps = 3/173 (1%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILT-GIGASGLVAQNFAW 152 + ++ + + A+ S+E L + +L + ++ G+G +G++A+ + Sbjct: 2 NIYETVQEELAKEATAIQKVAKQLSKESLEKAFDLLCKCKGKVVLTGMGKTGIIARKISA 61 Query: 153 KLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAI 212 L G + + + + D+++A+S +G +EL + ++AI Sbjct: 62 TLASTGTTSIFLHAAEGIHGDLGMIESGDVVIAVSNSGNTQELINLIPFLKFNYVPIIAI 121 Query: 213 TGFTPNALQQRASHCLYTIAEE--QATNSASISACHAQGMLTDLLFIALIQQD 263 TG + L + + L + + ++ + D L IAL++ Sbjct: 122 TGEPNSQLAKNSDVVLNCHIPKELEPLGLVPTASTTVALAVGDALAIALLKHK 174 >UniRef50_D2R6F2 KpsF/GutQ family protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R6F2_9PLAN Length = 365 Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 66/178 (37%), Gaps = 2/178 (1%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWK 153 + ++ + A+ + +L +IL+G+G +GL+A Sbjct: 16 DPLQLARTVLLSESDAIAGLATRLDHHFVSAVKMLLDCRGSLILSGMGKAGLIASKLTAT 75 Query: 154 LMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 G + V A+ + + D++L +SY+G E+ + G ++AIT Sbjct: 76 FASTGTRSHFVHPAEAIHGDLGRIAEGDVVLMLSYSGETEEITRILPMLRDFGASIIAIT 135 Query: 214 GFTPNALQQRASHCLYTI--AEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPE 269 G + L + A+ L E A ++ A L D L I + Q A + Sbjct: 136 GQPSSTLARAATVVLDLGRITEACPLGLAPSTSTAAMLALGDALAIVVSQSRGFSADD 193 >UniRef50_B2KC19 KpsF/GutQ family protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KC19_ELUMP Length = 329 Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 74/182 (40%), Gaps = 3/182 (1%) Query: 88 QIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVA 147 D ++ +++++ + + + + + R+++ GIG SG++ Sbjct: 1 MKNNSDEIKKTAKEVLEVENNELAKSHKSIDGNFIKSVNIINSISGRVVVLGIGKSGIIG 60 Query: 148 QNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGG 207 + A L G A + + AL + D +LA+S++G E++ + + Sbjct: 61 RKIAATLASTGTPALFMHPVEALHGDLGMIQTSDAILALSFSGNTEEISKLIPLISKRKL 120 Query: 208 KVLAITGFTPNALQQRASHCL--YTIAEEQATNSASISACHAQGMLTDLLFIALIQ-QDL 264 V+++TG + L + + + + E N A S+ L D L I L++ + Sbjct: 121 PVISMTGNENSKLAKLSDVHIKMHVSKEACPYNLAPTSSTTVMLALGDALAICLMRLKHF 180 Query: 265 EL 266 E Sbjct: 181 EK 182 >UniRef50_B6IXW6 Sugar isomerase, KpsF n=1 Tax=Rhodospirillum centenum SW RepID=B6IXW6_RHOCS Length = 330 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 46/187 (24%), Positives = 75/187 (40%), Gaps = 1/187 (0%) Query: 89 IRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQ 148 + DP+ L+ + A + L+ + ++ G+G SGL+A+ Sbjct: 1 MSAYDPIIASARDLLHIEAKTVLAQEQSLDDGFLNVVNHIGTRDTNTLVAGVGKSGLIAR 60 Query: 149 NFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGK 208 A KL +G A AL + PDDLL+ +S +G REL ++ G + Sbjct: 61 LLASKLASVGTRAWYYSTTDALHGELGGLRPDDLLILLSNSGQTRELVDLGRCAIQRGAR 120 Query: 209 VLAITGFTPNALQQRASHCLYTIAE-EQATNSASISACHAQGMLTDLLFIALIQQDLELA 267 V A+ P+AL + A L E E ++ A L D L IA+ ++ Sbjct: 121 VAAMVSRVPSALSRIADWTLRVHVEREATETRLPTASTAAMLALGDALVIAVARRRGFTV 180 Query: 268 PERIRHS 274 E R+ Sbjct: 181 DEYARNH 187 >UniRef50_Q2GAE9 KpsF/GutQ family protein n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2GAE9_NOVAD Length = 340 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 2/134 (1%) Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVR 192 R+ ++G+G SG VA+ A L G A + + A+ + P D+L+ +S +G Sbjct: 62 GRVFVSGVGKSGHVARKIASTLSSTGRPACFIHPVEAMHGDLGMLCPGDVLIVLSNSGAS 121 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGM 250 EL D R+ +++AI + L + A L E N A ++ Sbjct: 122 MELRGLVDHAQRLSARIVAIGARPDSPLMRVADIALVIPDGPEACPVNIAPTTSTTMMLA 181 Query: 251 LTDLLFIALIQQDL 264 L D L +A++ Sbjct: 182 LGDALAVAVMSARG 195 >UniRef50_A5VEU9 KpsF/GutQ family protein n=2 Tax=Sphingomonas wittichii RW1 RepID=A5VEU9_SPHWW Length = 334 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 66/177 (37%), Gaps = 3/177 (1%) Query: 100 EKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF 159 +++ A+ + E+ +L + R++++G+G SG +A+ A G Sbjct: 24 REVLGVEAQALTLQRDALDEDFARAVELILATQGRVVVSGMGKSGHIARKMAATFASTGT 83 Query: 160 NAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNA 219 A V A + DLL+ +S +G EL +G ++AI+ + Sbjct: 84 PAIFVHPGEAAHGDLGMLLAGDLLVVLSNSGATPELGPIMTYARDLGCPIVAISAQRHSP 143 Query: 220 LQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 + + AS + E N + ++ L D L +A + + + Sbjct: 144 MARLASAAIILPKVRETCPVNISPTTSTTLMLALGDALAVATMSMRG-ITRAELERL 199 >UniRef50_B0N1U0 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B0N1U0_9FIRM Length = 272 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 38/272 (13%), Positives = 95/272 (34%), Gaps = 27/272 (9%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L I + ++ ++A Y+L +S +LA E VS SS+ +F + +G + Sbjct: 14 LLSTINSEL--INSNNYRIAKYILENMRALEDISITELAKECYVSNSSISRFCRDIGLRD 71 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + LK +++ + + + + + + P + E + + +E+ + Sbjct: 72 YNELKSQIAKYQPAHQYAKNKFYYQSYQKEVPGQSFVEGV----IENLQLLKRTINEKDI 127 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 ++ VT + + + G S VAQN + L + + + +L Sbjct: 128 YKLVTDIANYSNVAAFGYMQSQSVAQNLQYDLQTCHKFIHTSMKYSDQIEYINNADSSNL 187 Query: 183 LLAISYTGVRRELNLAADEMLRVGG---------KVLAITGFTPNALQQRASHCLYTIAE 233 ++ +S +G K+ IT + + + + + Sbjct: 188 IIILSESGTY------FKRAFERKTLFRNTNDKPKIYLITCNSDIEI-PYVDYYIRYESI 240 Query: 234 EQATNSASISACHAQGMLTDLLFIALIQQDLE 265 + ++ +T ++ ++ LE Sbjct: 241 NDYASHP-----YSLAAITGMICTCYAERYLE 267 >UniRef50_C7TGG9 Phosphosugar isomerase n=4 Tax=Lactobacillus RepID=C7TGG9_LACRL Length = 203 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 67/182 (36%), Gaps = 3/182 (1%) Query: 91 GDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS-ARRIILTGIGASGLVAQN 149 + + ++ AAM + ++ + + + R++ G+G +G + Sbjct: 1 MKENKLDLVHTYMQREIAAMQLIESQINDVQYCSVIDKIMHLTGRLVFMGVGKTGHIGVK 60 Query: 150 FAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKV 209 A +G A V A+ + + +DL++ IS +G +E + R+G Sbjct: 61 LAATFASLGTPAIFVHATEAMHGDMGMITSEDLVILISNSGETKETLAPLPSLKRIGAAT 120 Query: 210 LAITGFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDLELA 267 +A TG + L Q L E A S+ A M+ D L + + A Sbjct: 121 VAFTGQDDSHLAQACESVLTIPVTHEADDLGLAPTSSSTAALMVGDALACTISRLKGFTA 180 Query: 268 PE 269 + Sbjct: 181 SD 182 >UniRef50_C1RI47 Transcriptional regulator n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RI47_9CELL Length = 296 Score = 107 bits (267), Expect = 5e-22, Method: Composition-based stats. Identities = 39/244 (15%), Positives = 83/244 (34%), Gaps = 17/244 (6%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R+ RY L ++K AD LL S+ +LA AGVS++++ + + LG+ Sbjct: 21 LDERVAARYAELPPQERKGADVLLEHFGDLATYSAAELAALAGVSKATMSRLFRSLGFDD 80 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F ++ L + + + + Sbjct: 81 FSQVRDHLRALRQHGLPLGLGDAPDLDAHVEAEAAAVRVAVAALAVHLDPVA-------- 132 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSPDD 181 +L A R+++ G+ S +A + +L ++ + A V L + SP D Sbjct: 133 ----DLLAHAPRVVVVGLRTSYPLALHLRQQLAQVRPHVALVPQPGQSLAEDLVDLSPQD 188 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++ ++ + + G V+ + T AL A+ + + + + Sbjct: 189 AVVLVALRRRPPGVRALVARLAEAGTPVVLLADPTARALAAHATWWVQCPVQTR----GA 244 Query: 242 ISAC 245 + Sbjct: 245 FDSY 248 >UniRef50_A3ZL92 Putative uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZL92_9PLAN Length = 363 Score = 106 bits (266), Expect = 6e-22, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 68/178 (38%), Gaps = 4/178 (2%) Query: 90 RGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILT-GIGASGLVAQ 148 + + G +I++ AA+ A + + + ++ I+ G+G +GL+ Q Sbjct: 12 TPQEEVLRFGRTIIQQEAAALSAIAERLD-ARFGQALDLVMQCPGDIIVTGMGKAGLIGQ 70 Query: 149 NFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGK 208 A G + + A+ + D++LA S +G E+ + +G + Sbjct: 71 KIAATFASTGTPSHFLHPAEAIHGDLGRVDEKDVVLAFSQSGETDEIVRLIPCLKSLGAQ 130 Query: 209 VLAITGFTPNALQQRASHCLYTI--AEEQATNSASISACHAQGMLTDLLFIALIQQDL 264 ++A+T N L + A L E A A ++ A L D L + + Sbjct: 131 IVAVTANENNTLARAAKIVLPLGPIVEAGANRLAPSTSTAAMLALGDALALTCSWRRG 188 >UniRef50_Q1IST9 KpsF/GutQ family protein n=5 Tax=Bacteria RepID=Q1IST9_ACIBL Length = 338 Score = 106 bits (266), Expect = 6e-22, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 69/183 (37%), Gaps = 13/183 (7%) Query: 100 EKLIKENTAAMYATLNVNS---EEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLM 155 E +++ A+ + + V +L R++++G+G SGL+ + A Sbjct: 16 ENVVRIEAEALRELADRIAGPMAADFQRAVDLLACCGGRVVVSGMGKSGLIGRKMAATFS 75 Query: 156 KIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGF 215 G A + A+ + + D+++A+S +G E+ + R+G V+ +T Sbjct: 76 STGAPALFLHPAEAMHGDLGMIARGDVVIALSASGETEEILNLLPTIKRLGAPVITMTCD 135 Query: 216 -------TPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDLEL 266 + L Q A L E A ++ L D L +AL ++ Sbjct: 136 NLYANGAKRSTLAQAADVALDCSIAQEACTLGLAPTASTTTMLALGDALAMALAEKRGFK 195 Query: 267 APE 269 + Sbjct: 196 EED 198 >UniRef50_C2K0T0 Possible transcriptional regulator n=2 Tax=Lactobacillus rhamnosus RepID=C2K0T0_LACRH Length = 280 Score = 106 bits (266), Expect = 7e-22, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 101/258 (39%), Gaps = 18/258 (6%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 RI+Q L ++ +L L Q + +LA S S++ + +KLG+KG+ Sbjct: 36 SRIQQAKVTLTHNETELLRSLSAQAGVIPRATITELAQSVFSSPSTIHRLIRKLGFKGYT 95 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 K+ + ++L S+ + L+K +++ T ++ + + Sbjct: 96 DFKVRVEDSLESELPLVLAQPN---------------LLKITISSIEHTFR-LNQGVIRD 139 Query: 125 CVTMLRSARRIILTGIGASGLVAQN-FAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 + +A R + G G A + F+ L+ G ++ +R+ + L V+ + +L Sbjct: 140 AARLFLAAERHYVYGTGWRQKQAVDNFSTDLLVYGESSITLRNKYDLGNAVKQMNEHSVL 199 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 L S +G E + ++++T N L + + +Y + ++ Sbjct: 200 LFTSLSGNTDEYAATLQQAKLQKVSIISVTRDVSNPLSEISDVAIYFADDTNLQDNRHWP 259 Query: 244 ACHAQGMLTDLLFIALIQ 261 A L ++L ++ Sbjct: 260 AITMSFSL-EMLINEILN 276 >UniRef50_B6BVE7 Arabinose 5-phosphate isomerase n=1 Tax=beta proteobacterium KB13 RepID=B6BVE7_9PROT Length = 326 Score = 106 bits (266), Expect = 7e-22, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 69/178 (38%), Gaps = 2/178 (1%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG 158 +K++ + + + + + RIIL+G+G SG +A A L G Sbjct: 15 AKKVLDIESIEINNAQKFIDDNFADIIIKLSECKGRIILSGMGKSGHIAGKIASTLSSTG 74 Query: 159 FNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPN 218 A + A + + DD+++ +S +G E+ + R+G ++AIT + Sbjct: 75 SPAFFMHPGEASHGDLGMITHDDIVIFLSNSGESDEIYNLIPSIKRIGASIVAITSNEKS 134 Query: 219 ALQQRASHCLY--TIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 + + A H + E A ++ + D + ++L Q + ++ Sbjct: 135 EIAKYADHHISSKVSTEACPLGLAPTASSALMLAIGDAIAVSLFQLKGFTTEDFLKSH 192 >UniRef50_B3QSH3 KpsF/GutQ family protein n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QSH3_CHLT3 Length = 333 Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats. Identities = 38/174 (21%), Positives = 78/174 (44%), Gaps = 4/174 (2%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA-RRIILTGIGASGLVAQNFAW 152 + + + + A+ A E+ + V ++ +A ++I+TG+G SG++AQ A Sbjct: 15 NFIDLARQTLLLESKALEAVSTRLD-EQFNAAVRLILNATGKVIITGMGKSGIIAQKIAA 73 Query: 153 KLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAI 212 + G A + A + S D+++ +S +G EL + ++ +++A+ Sbjct: 74 TMTSTGTPAVFMHPSEAAHGDLGVVSKGDVVIGLSKSGTTEELLYILPALKQLQVQIIAM 133 Query: 213 TGFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQDL 264 G +AL RA L E++ + A ++ A + D L +AL+Q Sbjct: 134 VGNVRSALALRADAVLDVAVEKEACPYDLAPTTSTTAMLAMGDALAMALMQAKK 187 >UniRef50_A5EVJ8 Arabinose 5-phosphate isomerase n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EVJ8_DICNV Length = 320 Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats. Identities = 35/148 (23%), Positives = 57/148 (38%), Gaps = 3/148 (2%) Query: 119 EEKLHECVTMLRSARRIILT-GIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 + L R ++ G+G SG +A A G A V A + Sbjct: 27 TDDFGRACETLMKTRGHVIVSGMGKSGHIAAKLAATFASTGTPAFFVHPSEAGHGDLGMI 86 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ-- 235 + D LL +S++G EL + + V+A+TG + L Q A + E + Sbjct: 87 TAADTLLMLSFSGESGELLAMLPALKTLAVPVIAMTGNPQSHLAQNADIHIPIHIEREAC 146 Query: 236 ATNSASISACHAQGMLTDLLFIALIQQD 263 N A ++ A + D L I+L+Q Sbjct: 147 PLNLAPTASTTAMLAVGDALAISLMQAR 174 >UniRef50_C7M027 Transcriptional regulator, RpiR family n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M027_ACIFD Length = 282 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 50/270 (18%), Positives = 88/270 (32%), Gaps = 18/270 (6%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 L +++ + D A SS +LA AGVSQ SV + A LG+ +P L+ AL Sbjct: 18 NRLTPVQRRIVQTIAEHLDDADTFSSAELAAIAGVSQPSVTRLASALGFASYPELRQALR 77 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 + + + + E + + SE L E L Sbjct: 78 ALVRDDSQPVESTPR------------LDAVRDEIANLTWMERQLTSEPLLAEAGRRLAG 125 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHAL---LATVQASSPDDLLLAISY 188 + +++ G+ AS +A ++ K+ V + + + L ++ Sbjct: 126 SVPLLVIGLRASAPLAAYLSFYARKVHPAVITVDRAGSEGIDAIAEAHARGANAALVLAL 185 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 REL + +G ++ I +Q RA L SA Sbjct: 186 PRWPRELLTLVEVAGDLGIDLVTIADRAHGPIQARARVSLVAPVGTSLLYDTHASAFVLA 245 Query: 249 GMLTDLLFIAL---IQQDLELAPERIRHSE 275 +L + A + +E ER Sbjct: 246 QLLVQAIADAAPLSAKASMEAFEERASRYR 275 >UniRef50_UPI00016A65F3 transcriptional regulator, RpiR family protein n=1 Tax=Burkholderia ubonensis Bu RepID=UPI00016A65F3 Length = 224 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 74/201 (36%), Gaps = 4/201 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + RI L +++ +Y+L P A + +LA S ++ +FA+ LG+ Sbjct: 15 SIAARIASAMPSLTPIHRRMGEYVLANPFRAATMRIDELAQAVDASIATANRFAKALGFD 74 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDD-PLRLVGEKLIKENTAAMYATLNVNSEE 120 G+PA++ AL + Q + + + + + T + Sbjct: 75 GYPAMRAALVRGFEATLAPVERLRSAQEQEAGVRDAAWIDAVFNQAVENIEDTRAQLNAA 134 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAA---AVRDMHALLATVQAS 177 + V + +ARR+++ G G+S +A L N + + + Sbjct: 135 NIEAAVEAIVAARRVLILGAGSSAFLAGLMEHGLSVCHDNVQSLALLGGPSHAARRLYTA 194 Query: 178 SPDDLLLAISYTGVRRELNLA 198 DL++AI++ + Sbjct: 195 DARDLVIAIAFPRYVEDTIEL 215 >UniRef50_Q2LUX9 Arabinose-5-phosphate isomerase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LUX9_SYNAS Length = 336 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 77/184 (41%), Gaps = 4/184 (2%) Query: 84 PIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA-RRIILTGIGA 142 Q D + E++++ ++ + V ++ + R+I+TGIG Sbjct: 1 MTRQQNMQKDQTIVRAEEVLRIEAESILQLIGRLDG-NFSRAVDIIYRSPGRVIVTGIGK 59 Query: 143 SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEM 202 SGL+ + + G A + + L + + DD+LLAIS +G E+N + Sbjct: 60 SGLIGKKIVATMTSTGTQALFLHPVEGLHGDLGIVTKDDVLLAISNSGETEEVNRLISSV 119 Query: 203 LRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALI 260 ++G +++ TG + + + + + E + A S+ A + D L +ALI Sbjct: 120 QKIGTPLISFTGNPSSTMARASDAVIDVGVEREACPFGLAPTSSSTATLAMGDALAVALI 179 Query: 261 QQDL 264 + Sbjct: 180 DKHK 183 >UniRef50_B0PES3 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PES3_9FIRM Length = 209 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 69/174 (39%), Gaps = 2/174 (1%) Query: 93 DPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAW 152 + + ++ I++ + A+ + E C +L R+I+TG+G +G + + A Sbjct: 7 EKIIDFCKEQIQKESDALLRVKSQVDEAYAQACRAILDCKGRVIVTGLGKTGHIGKKIAA 66 Query: 153 KLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAI 212 + +G A V L + + DDL++ IS +G E+ + +G K ++I Sbjct: 67 TMASLGIPAFFVHSCETLHGDMGMITKDDLVIMISNSGKSSEILNMLAPLKIIGAKTISI 126 Query: 213 TGFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDL 264 T + L + + A E A ++ + D L + + Sbjct: 127 TKDKHSPLAEATDIKILCDAGPEIDHMGLAPTASSTGALAIGDALATVVCKMRG 180 >UniRef50_D1AIY1 KpsF/GutQ family protein n=11 Tax=Fusobacteriaceae RepID=D1AIY1_SEBTE Length = 319 Score = 105 bits (263), Expect = 1e-21, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 75/174 (43%), Gaps = 2/174 (1%) Query: 92 DDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFA 151 D +++ + + + E + S+ ++++TGIG SG + + + Sbjct: 1 MDKSLTEAKRVFEAEIEELVKVKDRLDENFSKMVDMIYESSGKVVITGIGKSGHIGKKIS 60 Query: 152 WKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLA 211 L G N+ + AL + D++LAIS +G E++ + R+G ++A Sbjct: 61 ATLASTGTNSVFINAAEALHGDLGVIKKGDIVLAISNSGNSDEISNILPSVRRIGADIIA 120 Query: 212 ITGFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQD 263 TG +AL + A + +++ A +++ ++ D L AL+Q+ Sbjct: 121 FTGNKISALGKEADLIINIAIDKEACPMGLAPMTSATVTLVMGDALAAALMQKR 174 >UniRef50_C6X0T7 Arabinose 5-phosphate isomerase n=2 Tax=Flavobacteriaceae RepID=C6X0T7_FLAB3 Length = 319 Score = 105 bits (263), Expect = 1e-21, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 69/178 (38%), Gaps = 4/178 (2%) Query: 90 RGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQ 148 ++ + I+ + + N + V ++ S++ ++I+ GIG S V Sbjct: 1 MNNEEILRTARTAIETEISELENLKNRLD-ASFLKAVEIINSSKGKLIVVGIGKSAHVGN 59 Query: 149 NFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGK 208 L G + + AL + D++L IS +G E+ + Sbjct: 60 KIVATLNSTGTPSQFLHASEALHGDLGVIQKSDVVLCISNSGNSPEIVNLLTYLKGYSSA 119 Query: 209 VLAITGFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQDL 264 ++ +TG + L + + L T E++ A S+ Q L D+L + L++ + Sbjct: 120 LIGMTGNLNSKLAEISDVVLNTSVEKEACPIKLAPTSSTTVQMALGDVLAVCLMEING 177 >UniRef50_A8IPW3 Sugar isomerase n=58 Tax=Bacteria RepID=A8IPW3_AZOC5 Length = 354 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 3/153 (1%) Query: 120 EKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 E V + A+ R+I+TG+G SG VA+ A L G A V A + + Sbjct: 65 EAFEAAVATILGAKGRVIVTGMGKSGHVARKIAATLASTGTPAHYVHPAEASHGDLGMVA 124 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQ-A 236 P+D+++ +S++G EL D LR ++AIT +AL + A L + E Sbjct: 125 PEDVIIGLSWSGETAELRDIVDYALRFDVPLIAITSNRESALARAARVVLALPLSPEACP 184 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPE 269 A ++ Q + D L +AL++ A + Sbjct: 185 LGLAPTTSTLMQLAMGDALAVALLESRGFTAKD 217 >UniRef50_C7NES0 KpsF/GutQ family protein n=6 Tax=Fusobacteriaceae RepID=C7NES0_LEPBD Length = 325 Score = 105 bits (261), Expect = 2e-21, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 68/167 (40%), Gaps = 5/167 (2%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILT--GIGASGLVAQNFAWKLMK 156 + + + N + + V + + + GIG SG++ + A L Sbjct: 9 AKSVFDIEITELEKLKNRI-GDSFQKLVNTIMELKNNKVVVTGIGKSGIIGEKIAATLAS 67 Query: 157 IGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT 216 G A + AL + S D+++AIS +G E+ + ++GGK++ TG Sbjct: 68 TGTTAVFLNAAEALHGDLGIISNGDVVIAISNSGNSDEILSILSPIRKIGGKIVGFTGNP 127 Query: 217 PNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQ 261 + L + A + E++ A +S+ + + D L + L++ Sbjct: 128 NSTLGKYADITINVGVEKEACPLGQAPMSSTTSTLVTGDALAVCLMK 174 >UniRef50_Q0FF93 KpsF/GutQ family protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FF93_9RHOB Length = 329 Score = 105 bits (261), Expect = 2e-21, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 70/178 (39%), Gaps = 7/178 (3%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM-----LRSARRIILTGIGASGLVAQ 148 ++ + + T AM + +EK + V ++ R++++G+G SG++ + Sbjct: 2 TIKSTFKDCLLTGTNAMVTLTDSLKDEKFVKQVEAAVNVICTTSGRLVISGMGKSGIIGK 61 Query: 149 NFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGK 208 G + + A + DD+LL +S++G REL R Sbjct: 62 KLVATFASTGTPSLFLHPAEASHGDLGMLCKDDVLLLMSFSGESRELIDIIRYSKRFDVP 121 Query: 209 VLAITGFTPNALQQRASHCLYTI--AEEQATNSASISACHAQGMLTDLLFIALIQQDL 264 ++A T + L + A L E N A S+ Q L D L I L+++ Sbjct: 122 IIAFTANANSTLGKAADILLQLPKVKESCPHNLAPTSSTLIQLALGDALAITLLKEKG 179 >UniRef50_Q1MS86 FOG: CBS domain n=10 Tax=Desulfovibrionales RepID=Q1MS86_LAWIP Length = 360 Score = 105 bits (261), Expect = 2e-21, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 75/205 (36%), Gaps = 2/205 (0%) Query: 70 LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTML 129 + + + + + + L + +++ + + + + Sbjct: 14 VRKTMTAIHSYSKKYTESTQTSPEYLLKLAHEVLTIEMDGIETIRERLGNTFVEALLLLS 73 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYT 189 R+I+TG+G SGLV + A G A + + + + DL+L+IS + Sbjct: 74 SCKGRVIVTGVGKSGLVGRKIAATFSSTGTPAFFMHPVEGAHGDIGSLKSSDLILSISNS 133 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY--TIAEEQATNSASISACHA 247 G ELN + G ++A+T + L + A+ L+ E A ++ A Sbjct: 134 GETPELNAIVPTIKSFGTPMIALTSVLNSTLAKAANVVLHTEVPKEACPHGLAPTASTTA 193 Query: 248 QGMLTDLLFIALIQQDLELAPERIR 272 L D + + L+ + +R Sbjct: 194 VLALGDAIAVCLMSLKSFTEKDFLR 218 >UniRef50_C0QVG6 D-arabinose-5-phosphate isomerase n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0QVG6_BRAHW Length = 320 Score = 104 bits (260), Expect = 3e-21, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 62/172 (36%), Gaps = 2/172 (1%) Query: 100 EKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF 159 + + + + + + + R+I +G+G SG +A+ A G Sbjct: 8 KTTLLLESENLKMLSDKLDSNFENAVKELFNIRGRVITSGVGKSGHIARKAAATFASTGT 67 Query: 160 NAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNA 219 + V + + +D L S G RE+ + + R +AIT + Sbjct: 68 PSFFVDPNECMHGDFGMITKEDYCLLYSKGGESREIIELVNWLCRQNIPYIAITNDINST 127 Query: 220 LQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQDLELAPE 269 L + A L T +E+ A + A L+D L AL++ A + Sbjct: 128 LSKNAKITLLTHVKEEACPLRLAPTVSTTASLALSDALATALMELRGFRAED 179 >UniRef50_C3RLJ5 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RLJ5_9MOLU Length = 229 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 44/263 (16%), Positives = 87/263 (33%), Gaps = 39/263 (14%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN +R ++ L + + L YL + + ++ +Q+A+ S S++ + K G+ Sbjct: 1 MNI-EHLRDKFD-LNELELALVKYLEDNQNNLKDITIRQMASANFTSTSAIYRLCNKFGF 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ + LS + +Q SP ++ A LN Sbjct: 59 SGYSDMIYQLSSSNNTQLFSPDD-------------------FEQYIPAFIELLNK---- 95 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 II+ G+G S +A +L GF A V L + Sbjct: 96 ---------HRQHNIIVFGMGFSAPIADYLQQRLTLNGFYAMNVVHTEMLDIKY---QDN 143 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE--QATN 238 L + IS +G+ L D + +++ + L Q + + + N Sbjct: 144 SLFIVISNSGITPRLVEIVDNAFKNNIDIISFIANENSNLYQNVTLPIIVGSYNSFTHNN 203 Query: 239 SASISACHAQGMLTDLLFIALIQ 261 + ++ + L + Sbjct: 204 LVPNTFFGQVLIVFESLLYTYLS 226 >UniRef50_B5G8P1 Transcriptional regulator (Fragment) n=1 Tax=Streptomyces sp. SPB74 RepID=B5G8P1_9ACTO Length = 227 Score = 104 bits (259), Expect = 4e-21, Method: Composition-based stats. Identities = 49/192 (25%), Positives = 82/192 (42%), Gaps = 4/192 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + IR R GL+ ++ ++A +L + LS ++A A + SSVV+ Q+L ++ Sbjct: 11 DLAAHIRSRLSGLSGAEARVAHTVLDLGERLVGLSVSEVAALAETAPSSVVRTCQRLEFR 70 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+A A Q P P DP + + A+ + Sbjct: 71 GFQELKIA----AARQAPHPPGPADGFGDAADPAARALASTLAASREALDGLRTTLPPAR 126 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L E +L A R+++ G G S V + A++L +G A D + + Sbjct: 127 LGEAARLLHGASRVLVVGAGLSRPVVADTAYRLRAVGRVVDAPADPLTAQLSAGLLTDTS 186 Query: 182 LLLAISYTGVRR 193 + LA+S+TG R Sbjct: 187 VCLAVSHTGATR 198 >UniRef50_C3WCJ9 Predicted protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WCJ9_FUSMR Length = 241 Score = 104 bits (259), Expect = 4e-21, Method: Composition-based stats. Identities = 47/211 (22%), Positives = 94/211 (44%), Gaps = 27/211 (12%) Query: 8 RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALK 67 R+ L +S+++L D++ + S+ +L EA SQ+++ + +KLG++GF LK Sbjct: 15 REIRISLTRSEEELMDFIEKNFKEIPNYSAIKLCEEAYSSQATLNRVCKKLGFRGFSELK 74 Query: 68 LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 ++ E L + E ++ + E++ + Sbjct: 75 FSIEEDLK----------------------LMENSKNSYIHNTIYYIDNINFEEIDNIIK 112 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAIS 187 +L++ R+I+L G+GAS + A F +L+ +GF A + + + + D ++ IS Sbjct: 113 ILKNNRKILLYGLGASQITAAYFQRQLLYLGFQAIMISEEKMMESF-----DDFIIFIIS 167 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPN 218 +G + A M +G V+AIT + Sbjct: 168 SSGETLRVKHIAKNMKELGRIVIAITKKDSS 198 >UniRef50_A8TDJ4 Glucosamine--fructose-6-phosphate aminotransferase, isomerizing n=2 Tax=cellular organisms RepID=A8TDJ4_METVO Length = 629 Score = 104 bits (259), Expect = 4e-21, Method: Composition-based stats. Identities = 26/218 (11%), Positives = 70/218 (32%), Gaps = 8/218 (3%) Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 LK + S+ + +++++E + S+E++ + Sbjct: 257 LKNNCVKTNISKNILTLDWNIENAEKKGYEHFMLKEIMEE--PEIIKNSIKISQEEIQKL 314 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 M+ +I + +G S + K+G L+ L++ Sbjct: 315 AGMINDCDKIYVIAMGTSLHAGMIAEYWFSKLGKLVIPCDSSEFLI--KGIIDEKTLVVG 372 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 I+ +G + A G K ++ + + + + + + + Sbjct: 373 ITQSGETYDTIKAIKYAKNKGAKTASLVNVIGSTATRESDVTIMIGS-GLEISVCATKTF 431 Query: 246 HAQGMLTDLLFIAL---IQQDLELAPERIRHSEALVKK 280 +Q ++ LFI I +++E+ + + + K Sbjct: 432 MSQLVILYRLFIEYGKLINKNMEVYEKELEKIPKYISK 469 >UniRef50_Q1Q2H0 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q2H0_9BACT Length = 329 Score = 104 bits (259), Expect = 4e-21, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 74/173 (42%), Gaps = 5/173 (2%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR-SARRIILTGIGASGLVAQNFAW 152 +K++ + A+ ++ + V ++ + R+ +TG+G +G++ Q + Sbjct: 12 SDIDYAKKVLLLESEAIKNQIHRID-NHFQKAVDIIFTCSGRVAVTGVGKAGIIGQKISA 70 Query: 153 KLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAI 212 L G + + A + D++LA+S +G E+ L + ++G K++++ Sbjct: 71 TLASTGTPSYWIHSSEARHGDLGKIVASDIVLALSNSGET-EVVLLLPFLKQMGTKIISV 129 Query: 213 TGFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQD 263 TG ++L + L E+ A S+ A + D + + + ++ Sbjct: 130 TGNNKSSLALHSDVVLDIGNVEEACPLGIAPSSSTTAMLAIGDAIALTIFKKR 182 >UniRef50_D0D8D8 Transcriptional regulator, RpiR family n=1 Tax=Citreicella sp. SE45 RepID=D0D8D8_9RHOB Length = 290 Score = 104 bits (259), Expect = 4e-21, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 96/260 (36%), Gaps = 9/260 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + R+R ++ +++KLA + + + LA AGVS +V+++ KLG+ Sbjct: 6 DLAARLRN--SAVSTAERKLAAAFAENFPGSALGTVESLATRAGVSGPTVLRYLAKLGFP 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F + A+ + Q SP I + + + + ++ + + Sbjct: 64 RFADFQEAVKAEIDRQLGSPLQQIDR-AKDGGAEHHLYRRALLMQAESLRRAADQAVPAE 122 Query: 122 LHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASSP 179 +L +R + G S ++AQ A +L ++ + + T+ P Sbjct: 123 FDAIAELLSDSRLHVRPLGGRYSRILAQRLAMQLSQLRPDVTLLDMQLGFAYDTLVDLGP 182 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DL++ Y + EL A+ G +++ +T + + Q A L E Sbjct: 183 RDLVVIFDYRRYQEELLSFAEGARAAGARIVLLTDPWRSPIAQLAEAVLTAPDET----L 238 Query: 240 ASISACHAQGMLTDLLFIAL 259 + + + L A+ Sbjct: 239 SPFGSRVVPTAQVEALVAAV 258 >UniRef50_Q9WXZ5 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=13 Tax=Thermotogaceae RepID=GLMS_THEMA Length = 606 Score = 104 bits (259), Expect = 4e-21, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 59/160 (36%), Gaps = 9/160 (5%) Query: 130 RSARRIILTGIGASGLVAQNFAWKL-MKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 ++A RI + G S F + L + + D+L+AIS Sbjct: 289 KNADRIRVVSCGTSYYAGLVFKYFLENHTDIDVE-IEVSSEFRYKRPHIKEGDVLIAISQ 347 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 +G + + + G K+++I + L + + L+ A A+ A+ Sbjct: 348 SGETADTLESVRLAKKHGAKIVSIVNVVGSTLDRESDVTLFMNA-GPEIGVAATKTYVAE 406 Query: 249 GMLTDLLFIALIQQDL------ELAPERIRHSEALVKKLV 282 + LL + +++ + E +++ L++ ++ Sbjct: 407 LAVLYLLGLKIMEINGYWDREAEEILDKLVRMPELLENVL 446 >UniRef50_C3WG43 SIS domain-containing protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WG43_FUSMR Length = 241 Score = 104 bits (259), Expect = 4e-21, Method: Composition-based stats. Identities = 39/236 (16%), Positives = 85/236 (36%), Gaps = 31/236 (13%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 + ++ ++Y L +S++ Y++ + + + + +A S S V+ A+KLGYKGF Sbjct: 9 IYKLGEKYH-LTESEELALKYIVNNFEKSLEIGVRGVAKNCFASTSVVMNLAKKLGYKGF 67 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 + L ++ + + + + +EKL Sbjct: 68 VDMVYRLEFSIKNSLSNSNSLNNYC--------------------------TNLDDEKLK 101 Query: 124 ECVTMLRSARRI-ILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 ++ + R + G G SG V + A KLM +G + + Sbjct: 102 YFKNLISNTTRPIFIHGTGFSGAVTKYMADKLMVLG---YYSSRSEYMETMEPKYHQKAI 158 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 LL +S +G ++ + ++ ++ TG + + L+ A + Sbjct: 159 LLVVSKSGETSQIIMLCEKANLRNVPIVLFTGTSNSTLENLADLTFIIKDSNPIDD 214 >UniRef50_Q0BL14 Arabinose-5-phosphate isomerase n=20 Tax=Gammaproteobacteria RepID=Q0BL14_FRATO Length = 327 Score = 103 bits (258), Expect = 5e-21, Method: Composition-based stats. Identities = 36/169 (21%), Positives = 68/169 (40%), Gaps = 7/169 (4%) Query: 101 KLIKENTAAMYATLNVNSEEKLHECVTMLRSARR----IILTGIGASGLVAQNFAWKLMK 156 + + + N E + ++ R +I+TG+G SG + + A Sbjct: 14 ETFRLEIETLEKLKNSID-ENFEKACEIILENNRDKSRVIITGMGKSGHIGKKMAATFAS 72 Query: 157 IGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT 216 G A V A + +D+L+AIS +G E+ + + ++AIT Sbjct: 73 TGTPAFFVHPGEAGHGDFGMITKNDVLIAISNSGTSSEIMGLLPMIKHLDIPIIAITSNP 132 Query: 217 PNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQD 263 + L + ++ L +++ N A S+ A +L D L IAL++ Sbjct: 133 KSILARNSNVTLNLHVDKEACPLNLAPTSSTTATLVLGDALAIALLKAK 181 >UniRef50_B9Y5H0 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5H0_9FIRM Length = 263 Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 97/272 (35%), Gaps = 18/272 (6%) Query: 1 MNG--LLRIRQRYQGLAQSDK-----KLADYLLLQPDTARHLSSQQLANEAGVSQSSVVK 53 M L + + L ++++ LA+Y L L+ +A + VS+SS+ + Sbjct: 1 MKINRLSLLNSLFNVLNENNQGDPYFILAEYFLEHYHELSRLNIYDVAADCFVSRSSIRR 60 Query: 54 FAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYAT 113 F Q +GY+ F A K ++ + + E L +E A + Sbjct: 61 FCQAIGYENFVAFKDEFAQYDDQRAS---------FQKHAGRENYRETLTQEINAMIAEL 111 Query: 114 LNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLAT 173 + ++ + AR ++ F ++ V DM+ + Sbjct: 112 DQRMNTAEVERLAERIHDAREVVFLTSSVGATSVAQFQHSMIFQNKVIRMVSDMYENIDF 171 Query: 174 VQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE 233 V+ +DLLL IS +G+ + D + + T + + A Sbjct: 172 VKHLQKEDLLLVISGSGLFAAASR--DYLRDNPAYKILFTLNRSHDFDDVYDTIYHLSAA 229 Query: 234 EQATNSASISACHAQGMLTDLLFIALIQQDLE 265 +++ + S+ + + D+L+ +++ + Sbjct: 230 DRSQEAKSVYYTYGTIYVLDVLYSVYVKKYGD 261 >UniRef50_D0XK10 KpsF/GutQ family protein n=1 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XK10_9CAUL Length = 332 Score = 103 bits (257), Expect = 6e-21, Method: Composition-based stats. Identities = 40/182 (21%), Positives = 64/182 (35%), Gaps = 2/182 (1%) Query: 90 RGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQN 149 + +I+ N A+ A C +L +++TGIG SG + Sbjct: 12 EAIGEMTEHARSVIRLNIEALQALERTVDASVARACDIILSRPGYVVVTGIGKSGHIGGK 71 Query: 150 FAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKV 209 A L G NA V + D LLAIS +G REL R G V Sbjct: 72 IAATLASTGTNAFFVHPAEMSHGDLGMLRHDTTLLAISNSGESRELRDPLLFCQRNGIPV 131 Query: 210 LAITGFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDLELA 267 + +T + L + ++ + + E A ++ L D L + L+ + A Sbjct: 132 IGMTQRGSSFLARMSAVAMVMPSVAEACPNGLAPTTSTLMTLALGDALAMVLMNRRGFSA 191 Query: 268 PE 269 Sbjct: 192 EA 193 >UniRef50_C3RMD5 Transcriptional regulator (Fragment) n=2 Tax=Bacteria RepID=C3RMD5_9MOLU Length = 227 Score = 103 bits (257), Expect = 7e-21, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 81/222 (36%) Query: 56 QKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLN 115 +K F K+ L+ L + + I QI+ + V EK+ + T Sbjct: 1 KKFNDGSFSDFKVDLAYELQNMMSKGNNKILFQIKKQETAFSVMEKIASVEKDTIDRTKL 60 Query: 116 VNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQ 175 + + +++ ++ A I + G + + F + + +IG D + Sbjct: 61 LLNYQQIERITKLINKATIIYIFADGINEQIGHEFKYMMARIGKAVEIATDNFWVALNCL 120 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 + S + L + +++ +L ++ +A+TG+ + + + Sbjct: 121 SESANPLAIYVNHREHNVQLLEKIRLNHKIAIPGIAVTGYINSTFETCCKEVITIPTGVS 180 Query: 236 ATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 ++ A + A + + L +I + EL+ +++ L Sbjct: 181 YSDLAPVIYTTAIRYVLNTLVGCVIASNHELSMDKLIDYTEL 222 >UniRef50_B5H4P8 Predicted protein n=4 Tax=Streptomyces RepID=B5H4P8_STRPR Length = 304 Score = 103 bits (257), Expect = 8e-21, Method: Composition-based stats. Identities = 56/243 (23%), Positives = 98/243 (40%), Gaps = 2/243 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQP-DTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 +R ++ L+ +++ +A YL+ P + S+Q+L +G S ++VV+ Q+LGY Sbjct: 17 LRATVRDQWDELSAAERTVAQYLVSAPAEQVMFASAQELGTASGTSNATVVRALQRLGYA 76 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G PALK L+ S L+ + + E + + + Sbjct: 77 GLPALKRELAADFTSALAPEVRLKQRIAHVGQDLQTIWNDVFDETQDRIDQCRRLTGADA 136 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + V L AR ++ G+ A L A++ A L +IG A V LA S Sbjct: 137 LQQAVAALADAREVLCYGVAACELAARHLALALGRIGRRARFVGATGFALADPLLSLAQG 196 Query: 182 LLLAISYTGVR-RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 + I G EL + + VG KV+ +T A ++R L + Sbjct: 197 DTVVIFQPGRPLSELTVLVERARSVGAKVVFVTDELGEAFEERVDAILTAPHTPTGITNE 256 Query: 241 SIS 243 +++ Sbjct: 257 ALT 259 >UniRef50_D1PYZ2 Arabinose 5-phosphate isomerase n=9 Tax=Prevotella RepID=D1PYZ2_9BACT Length = 328 Score = 103 bits (257), Expect = 8e-21, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 70/168 (41%), Gaps = 4/168 (2%) Query: 97 LVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILT-GIGASGLVAQNFAWKLM 155 ++ + E A+ + + V ++ R I+ G+G SG + A L Sbjct: 14 DYAKRCLTEEAQAISDLMLQLD-DSFTRAVELMYHCRGKIIVTGVGKSGNIGAKIAGTLS 72 Query: 156 KIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGF 215 G A + + A + + DD++LA+S +G EL +L + ++ ++ Sbjct: 73 STGTPAFFINPLDAYHGDLGVMTSDDVVLALSNSGQTDELLRFIPILLHMNIPIVGMSRN 132 Query: 216 TPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQ 261 + L + ++ + + + N A S+ A ++ D L IAL+Q Sbjct: 133 PESLLAKYSTVHIKVWVDHEACPLNLAPTSSTTAALVMGDALAIALMQ 180 >UniRef50_Q3B0E2 KpsF/GutQ n=16 Tax=Cyanobacteria RepID=Q3B0E2_SYNS9 Length = 342 Score = 103 bits (256), Expect = 8e-21, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 74/181 (40%), Gaps = 6/181 (3%) Query: 90 RGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR----RIILTGIGASGL 145 + + ++E +A+ S E++ + +L ++++TG+G SG+ Sbjct: 9 SSWISVLSALTRCLQEEASAISTAAERLSSEQVEAAIQLLERCADRKAKLVITGVGKSGI 68 Query: 146 VAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRV 205 VA+ A IG A + + AL + +P+D+ L +S +G EL + R Sbjct: 69 VARKIAATFSSIGLMALYLNPLDALHGDLGVVAPEDVCLMLSNSGETTELLEVLPHLKRR 128 Query: 206 GGKVLAITGFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQD 263 G +AI G ++L + + L E N A ++ + D L +++ Sbjct: 129 GTGRIAIVGRAESSLGRGSDVVLEASIDREVCPLNLAPTASTAVAMAIGDALAAVWMERR 188 Query: 264 L 264 Sbjct: 189 G 189 >UniRef50_C1QDK1 KpsF/GutQ family protein n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QDK1_9SPIR Length = 321 Score = 103 bits (256), Expect = 8e-21, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 64/172 (37%), Gaps = 2/172 (1%) Query: 100 EKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF 159 + + + + + + + + R+I +G+G SG +A+ A G Sbjct: 8 KTTLLLESENLRDLSDKLDINFENAVKELFKIRGRVITSGVGKSGHIARKAAATFASTGT 67 Query: 160 NAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNA 219 + V + + DD + S G RE+ + +LR +A+T + Sbjct: 68 PSFFVDPNECMHGDFGMITKDDYCILYSKGGESREIIELVNWLLRQNISYIAVTNEIDST 127 Query: 220 LQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQDLELAPE 269 L + A L T +E+ A + A L+D L AL++ A + Sbjct: 128 LAKNAKIVLLTYVKEEACPLKLAPTVSTTASLALSDALATALMEIRGFRAED 179 >UniRef50_Q0RUQ9 Possible 6-phospho-3-hexuloisomerase n=3 Tax=Rhodococcus RepID=Q0RUQ9_RHOSR Length = 193 Score = 103 bits (256), Expect = 8e-21, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 12/181 (6%) Query: 104 KENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAA 163 + LN + E+ +++ SAR + + G G SGL Q A +LM +G Sbjct: 17 RIVLDENERLLNSVAAEQWDRAGSLITSARAVFVIGNGRSGLAVQMAAMRLMHLGLRVHV 76 Query: 164 VRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQR 223 ++ A DLL+A+S +G + AAD +VG VLA+T + L +R Sbjct: 77 AGEVTAPA-----IGDGDLLIAVSGSGTTASVVGAADTANKVGASVLAVTTAPDSPLARR 131 Query: 224 ASHCLYTIAEEQATNSASISACHA-------QGMLTDLLFIALIQQDLELAPERIRHSEA 276 A L A ++ +SA+I+A +A + D LF AL + A Sbjct: 132 ADEVLILPAADKQDHSAAITAQYAGSLFEQSVLLAFDALFQALWHNVDQTAERLWERHAN 191 Query: 277 L 277 + Sbjct: 192 I 192 >UniRef50_Q58815 Mja gf6p intein n=17 Tax=cellular organisms RepID=GLMS_METJA Length = 1099 Score = 103 bits (256), Expect = 9e-21, Method: Composition-based stats. Identities = 30/229 (13%), Positives = 72/229 (31%), Gaps = 9/229 (3%) Query: 57 KLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNV 116 K G+ + + + + + + ++++++ + Sbjct: 721 KKKENGY-EVTIENNGNTVEREMMEINWDISSAEKMGYPHFMLKEIMEQ--PEVLKVSAK 777 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA 176 S E++ E ++ R+ +G S A + K+G A L Sbjct: 778 ISAEEIKELAKCIKDYDRVYFVAMGTSLHAAMVVEYLFAKLGKLVIACDASEFL--NKGV 835 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 L++ I+ +G + A + K AI + + A + A Sbjct: 836 VDDKTLVIGITQSGETYDTLKALRFAKKNKAKTGAIVNVLGSTATREADITVMMGA-GIE 894 Query: 237 TNSASISACHAQGMLTDLLFIALIQ---QDLELAPERIRHSEALVKKLV 282 + +Q M+ LFI + +D+ + I +K+++ Sbjct: 895 IAVCATKTYTSQLMILYRLFIEYGKLLGRDMSEYEKEIDKIPNYIKEVL 943 >UniRef50_Q3Z924 Glucosamine--fructose-6-phosphate aminotransferase, isomerizing n=5 Tax=Dehalococcoides RepID=Q3Z924_DEHE1 Length = 593 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 29/189 (15%), Positives = 56/189 (29%), Gaps = 6/189 (3%) Query: 90 RGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILT--GIGASGLVA 147 K I E + TL + +L R+ + G+S A Sbjct: 238 AQKGGYSHYMLKEIHEQPQVIQNTLINMPLTESFYKSPLLEQGRKTGILFLACGSSYHAA 297 Query: 148 QNFAWKLM-KIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVG 206 + + + P L + +S +G ++ A + + G Sbjct: 298 LTGRYLVEEHLNIPVRLEVASEFNYMQH--LPPCKLAVVLSQSGETADILRAMRRLKQAG 355 Query: 207 GKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLEL 266 ++AIT + + A H +YT A A+ + AQ ++ L A Sbjct: 356 CMIVAITNVAGSTAARLADHVIYTQA-GPEIGVAATKSFIAQLVVLYALCFACASAASPR 414 Query: 267 APERIRHSE 275 + + Sbjct: 415 YQDYLSTMR 423 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 47/152 (30%), Gaps = 8/152 (5%) Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG-FNAAAVRDMHALLATVQA 176 S + + + + A+ G G + +A A KL +I +A Sbjct: 435 SHQNIKDAAIEVAKAKSAFFIGRGINYPIALEGALKLKEISYIHAEGYAAGELKHGPFAL 494 Query: 177 SSPDDLLLAISYTGVRRE-LNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 SP+ +LA+ E + E+ ++ I + L+Q A + + Sbjct: 495 LSPETPVLALVSRDQTYEAMLTGLREIKVRRAPLIVIGEDGDDQLEQLADRVIKIPPFNR 554 Query: 236 ATNSASISACHAQGMLTDLLFIALIQQDLELA 267 + S ++ LL + Sbjct: 555 LFSPILFS------VVLQLLAFYAAYELGRDI 580 >UniRef50_Q8U472 Hexulose-6-phosphate synthase (D-arabino 3-hexulose 6-phosphate formaldehyde lyase) n=2 Tax=Pyrococcus RepID=Q8U472_PYRFU Length = 434 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 5/155 (3%) Query: 91 GDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNF 150 D +K +K+ T + + E++ V + A +I + G G SGLV + F Sbjct: 255 FWDEYMRTIKKAMKDITEHINEVADKLKLEEVRGLVDAMIGANKIFIYGAGRSGLVGKAF 314 Query: 151 AWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVL 210 A +LM + FN V + A DLL+AIS +G + + AA+ + GGKV+ Sbjct: 315 AMRLMHLDFNVYVVGET-----ITPAFEEGDLLIAISGSGETKTIVDAAEIAKQQGGKVV 369 Query: 211 AITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 AIT + + L + A + + A Sbjct: 370 AITSYRDSTLGKLADVVVEIPGRTKTDVPTDYIAR 404 >UniRef50_B5XTC8 Transcriptional regulator, RpiR family n=6 Tax=Enterobacteriaceae RepID=B5XTC8_KLEP3 Length = 240 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 38/243 (15%), Positives = 81/243 (33%), Gaps = 29/243 (11%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ R L++++ + ++ P+ + +A + + SS+V+ A+KL + Sbjct: 1 MDLENIFRDV--KLSKTEMTVLRFIQNDPEQCIRQGVRAVAEQCYSNPSSLVRLAKKLKF 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ L + + + I + A+ L ++ Sbjct: 59 SGWLELVYFIKFNITMPKLDVTNDIDYMSVQPE--------------EALTLLLASLKQQ 104 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 RI++ G G S L+AQ K + G NA+ + + ++ Sbjct: 105 -------------RILIHGSGFSQLIAQYIYNKFLVTGVNASLALWPDYEILEQKNAACF 151 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D + IS +G + ++ TG + L Q A ++ + Sbjct: 152 DSIWIISKSGRSSSALNWVKALEGKEINLVCFTGDYQSPLAQAADTAFIIHDPQKFDDDI 211 Query: 241 SIS 243 S Sbjct: 212 YWS 214 >UniRef50_C4ICA8 SIS domain protein n=2 Tax=Clostridium butyricum RepID=C4ICA8_CLOBU Length = 234 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 91/259 (35%), Gaps = 33/259 (12%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 + R+ + L+ SD K+ +Y++ P + +QLA S +S+++ A+KLGY G+ Sbjct: 7 IDRLFKNQ-NLSDSDIKILEYIVDNPGKVQKEGIRQLAKINFTSTASIIRLAKKLGYSGY 65 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 L + + + + + +N + L Sbjct: 66 NELIFDVKKMTS----------------------------ESSIKDRQNLVNNSKFPSLD 97 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 E + I + G G V KL+ +N + + + + + L Sbjct: 98 EINFYFNKNKYIYIYGEGFCEFVTGYIHRKLLVKKYNVILLHGLEIPIVYDEM--HNPTL 155 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN-SASI 242 L IS +G ++M G V++IT + + + + + A N + Sbjct: 156 LLISKSGENFSCINKIEQMRSFNGNVVSITSNPNSTISKSSDISFSIPDDNIADNKNEGF 215 Query: 243 SACHA-QGMLTDLLFIALI 260 + L + +F ++ Sbjct: 216 TTFFGDSINLLEQIFSKIL 234 >UniRef50_Q4A7H2 Putative uncharacterized protein n=6 Tax=Mycoplasma RepID=Q4A7H2_MYCH7 Length = 259 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 52/242 (21%), Positives = 96/242 (39%), Gaps = 5/242 (2%) Query: 18 DKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQ 77 DK++A +LLL L + +A A S +SV+KF +KLG+KG L AL + Sbjct: 21 DKEIAGFLLLNIQKIMSLKLEIIAKSANCSTASVIKFCKKLGFKGLKDLLPALDRNYSYL 80 Query: 78 PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIIL 137 N+I + + K + N + + + V +L+ R I+L Sbjct: 81 NFQKKRYSENKISQKN---QILSKYHLLIMNNLDKIYN-LNYNSMIKFVKLLQKTRHIML 136 Query: 138 TGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNL 197 G G++ FA L K+ ++ D + S + + S++G+ ++ Sbjct: 137 FGKGSNLESINIFANYLSKLQYHIDYHYDFEVQQKWTEKSIDSSVCVFFSFSGMHSIIDE 196 Query: 198 AADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFI 257 ++M ++A TG + L +++ T E + SA + L + Sbjct: 197 LVNKMKAKNCIIVAFTGNFESNLYKQSLISFLTFKNEDVLEN-HTSARISFIYLVMQIIN 255 Query: 258 AL 259 L Sbjct: 256 LL 257 >UniRef50_UPI0001C35662 hypothetical protein ChatD1_20770 n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35662 Length = 260 Score = 102 bits (254), Expect = 1e-20, Method: Composition-based stats. Identities = 37/265 (13%), Positives = 99/265 (37%), Gaps = 14/265 (5%) Query: 2 NGLLRIRQRYQGL-AQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 + I+ + +++ +A ++ D S QQ+A+ S +++ +F +KL + Sbjct: 9 SITRLIQIVNDNMANETEWDIAVQMIKHMDEIPGASIQQVADICHCSIATISRFVKKLNF 68 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + F + L+ L + P+ + E ++ + S + Sbjct: 69 ENFSTFRYKLAMDLFNSPKLNLKMPGEYQI---DYAELKENYLETVKTQIDELEKGLSLD 125 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ V +L +A I++ G A F L G + V+ + + + Sbjct: 126 EIERAVELLHAAETILIYSHGDLDFHA--FQVDLAMHGKASWHVKGYSEMKKALDTLHDN 183 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +++A ++ + + + +G K++ ++ + N ++ A E + Sbjct: 184 TVVIAPLFS--TQNGRQNVEMLHNLGIKMIIVSRGSVNVYEKYADAFFRIRMSETKMDD- 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLE 265 + +L D+L + ++ +E Sbjct: 241 -----YLIHLLFDILSMHYRKRYME 260 >UniRef50_O26273 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=5 Tax=Euryarchaeota RepID=GLMS_METTH Length = 590 Score = 102 bits (254), Expect = 1e-20, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 69/217 (31%), Gaps = 9/217 (4%) Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 L++ E + E S+ + K I E +A+ TL ++ Sbjct: 219 DLRVTDMEGNTVEKEVHSIDWSADMAEKGGYDHFMLKEIHEEPSAVRDTLTEWD--EVLG 276 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKI-GFNAAAVRDMHALLATVQASSPDDLL 183 V + RI G S + + + G + + A + L Sbjct: 277 VVEEIGEVERICFVACGTSYHASLVGKYLFESLLGIPTDVI-LASEFRYSAGALNDRTLA 335 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + IS +G + A K LAI ++ + A H LYT A A+ Sbjct: 336 IFISQSGETADTLNALRAANSR-AKTLAIVNVLGSSATREAQHVLYTRA-GPEIGVAATK 393 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +Q + +L A+ +R+ +++ Sbjct: 394 TYVSQLTVIYMLVAAMGA---PELMDRLERVPEFMER 427 Score = 43.0 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 17/118 (14%), Positives = 35/118 (29%), Gaps = 10/118 (8%) Query: 114 LNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHAL--- 170 + E+ + E G G + A A KL + Sbjct: 427 RALEDEDGIKELAATCSDVSDFFFIGRGFAYPTALEGALKL----KEITYIHGEGYAAGE 482 Query: 171 --LATVQASSPDDLLLAISYTGVRRE-LNLAADEMLRVGGKVLAITGFTPNALQQRAS 225 + ++AIS G + +E+ G +V+ + + +L++ A Sbjct: 483 LKHGPLALIDNGVPVVAISPPGPCHDKTLSNVEEVRARGARVIGVGSISDESLRKEAD 540 >UniRef50_C9D0H7 Putative transcriptional regulator RpiR family protein n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9D0H7_9RHOB Length = 319 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 52/246 (21%), Positives = 91/246 (36%), Gaps = 14/246 (5%) Query: 40 LANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVG 99 +A +AGVS+ +V +F ++LGYKG LK AL + S PS+ G Sbjct: 79 VAAKAGVSEITVSRFLKRLGYKGISGLKEALRTEMTSALLEPSLRSERLKEGS------L 132 Query: 100 EKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF 159 + ++ A E + L ARR+ +TG VA++FA +L + Sbjct: 133 SGFLTSEAESLLALAQQMETENWTRMIATLDQARRVYVTGFQTVSGVAEDFAKRLNIVRS 192 Query: 160 NAAAVRDMHALLATVQASSPD----DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGF 215 + V L + D D+L+ + RE + + G V+ IT Sbjct: 193 SVHFVSANSGGLVEWVDAGRDDYRQDVLIVVDIVPFAREAIQISRLAQKTGMTVVVITDE 252 Query: 216 TPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 N + + + + L + + A+ Q+D E R + Sbjct: 253 FNNWAYDYTDYVFHGRTKTGLF----LETTAPLVTLQNFIVHAVAQKDPERTQHRRAEWQ 308 Query: 276 ALVKKL 281 + + +L Sbjct: 309 SYLSEL 314 >UniRef50_Q1CZW3 GutQ protein n=6 Tax=Cystobacterineae RepID=Q1CZW3_MYXXD Length = 352 Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 65/176 (36%), Gaps = 4/176 (2%) Query: 98 VGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILT-GIGASGLVAQNFAWKLMK 156 +++ A+ + V ++R R ++ G+G +G + Q + L Sbjct: 37 YARSVLEAEARAILGVTERL-GDDFLRAVQLVRDCRGQVIVTGMGKAGHIGQKLSATLAS 95 Query: 157 IGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT 216 G + + A+ + D++LA+S +G EL R+ V+A+TG Sbjct: 96 TGIRSVYLHPAEAVHGDLGRVGRGDVILALSNSGSTEELIRLLPSFKRMETPVIALTGDA 155 Query: 217 PNALQQRASHCLYTI--AEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPER 270 + L + A L AE ++ A + D L + +++ + Sbjct: 156 KSPLGRGADVVLDIGAIAEACPMGLVPTASTAALHAIGDALAMTVLRSRPFGTEDY 211 >UniRef50_B1CBZ6 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CBZ6_9FIRM Length = 203 Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 68/162 (41%), Gaps = 5/162 (3%) Query: 100 EKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILT-GIGASGLVAQNFAWKLMKIG 158 +K+I+ + ++ + + V M+ + I+ G G SGL+++ A L G Sbjct: 11 KKVIEMERYELGRLMDSLD-DNFVKAVDMITECKGKIILTGTGKSGLISRKIAATLCCTG 69 Query: 159 FNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAA-DEMLRVGGKVLAITGFTP 217 A + + + A P+DL++AIS +G L +G K + +TG T Sbjct: 70 KPAFFLSAYNCENGDIGAIQPNDLIIAISNSGETTILKELVIPSAKTIGAKAICLTGNTE 129 Query: 218 NALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFI 257 + L + LY E++ T + ++ + D L + Sbjct: 130 STLAKLCDVALYIGVEKEACPTGVNATTSTTNTLAMGDALAM 171 >UniRef50_C3RLV2 Predicted protein n=2 Tax=Bacteria RepID=C3RLV2_9MOLU Length = 261 Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats. Identities = 43/247 (17%), Positives = 89/247 (36%), Gaps = 5/247 (2%) Query: 15 AQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEAL 74 +D +A ++ + + LS +++A EA +S +SV +F K G++ F A K E Sbjct: 18 NSNDYNIARTIINHIEDIKILSLEKIAEEANISPASVSRFINKAGFESFQAFKYEF-ELF 76 Query: 75 ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARR 134 + + H Q + + E L + A + T +KL E V +L++++ Sbjct: 77 TRDVKMRRIISHTQRFMRTTIENMSESLYVDGLANLRQTKLNLDIDKLKEIVKLLKTSKS 136 Query: 135 IILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGV--R 192 + G +++ A + + +D ++ I Sbjct: 137 VTFIGDSHELADFYTLQLEMLVNDIPAYLINFYEFEKMYLNQLDHNDTIVFIGVYKEWFS 196 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLT 252 D K++A L++ A LY + N S + +L Sbjct: 197 DAQKEILDYAKERKIKIIAFVQEED-YLKEYADL-LYVYGIPDSYNDGYYSLPYLNRLLC 254 Query: 253 DLLFIAL 259 ++++ L Sbjct: 255 EMIYFKL 261 >UniRef50_D2Q6J1 Sugar isomerase or sugar amino transferase n=6 Tax=Bacteria RepID=D2Q6J1_9BIFI Length = 183 Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 73/169 (43%), Gaps = 10/169 (5%) Query: 100 EKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF 159 ++++ + + E L + ++ RI G G SG A++FA ++M IG+ Sbjct: 5 NRVLERIVEEIQGVIARMDENDLERAMALITKGSRIYAAGEGRSGFQARSFAMRMMHIGY 64 Query: 160 NAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNA 219 + + + + D+LLAIS +G R A+ +G +V+A+T + + Sbjct: 65 TSYMMGET-----ICPSMREGDVLLAISGSGKTRRTVEDAEAAKNLGVRVIAVTSKSDSP 119 Query: 220 LQQRASHCLYTIAEEQATNSASI---SACH--AQGMLTDLLFIALIQQD 263 L A + + +S SI S+ + + D L + L ++D Sbjct: 120 LASVADAVIVVPGRVKGESSGSIQLLSSLFDQSVHIALDALCLMLSRRD 168 >UniRef50_C1NBK9 KpsF/GutQ family protein n=1 Tax=Escherichia sp. 1_1_43 RepID=C1NBK9_9ESCH Length = 332 Score = 101 bits (252), Expect = 2e-20, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 65/173 (37%), Gaps = 2/173 (1%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG 158 ++ ++ + E ++ + R+I+TG+G G +A + L G Sbjct: 16 ARNILASEAQSLLEAIPTIGESFARAIRLLVDTRGRVIVTGMGKPGYIAHKISATLASTG 75 Query: 159 FNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPN 218 + + A + + D++LA+S +G E+ + R+G ++++ G + Sbjct: 76 TPSFYLHPAEAAHGDLGMVTSSDVILALSNSGETPEILALLPVLKRIGLPIISLCGNENS 135 Query: 219 ALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDLELAPE 269 L + + L E N A ++ L D + + L+ + Sbjct: 136 TLAKHSDVFLSAAVKQESCPLNLAPTNSTTLSLSLGDAMAVILMNIRKFKKED 188 >UniRef50_Q11YC7 Sugar phosphate isomerase, KpsF/GutQ family n=27 Tax=cellular organisms RepID=Q11YC7_CYTH3 Length = 322 Score = 101 bits (252), Expect = 2e-20, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 72/171 (42%), Gaps = 4/171 (2%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAW 152 + + +I + A+ +N + + + + S + R+++TGIG S ++ Sbjct: 6 NIVSIVTDVILNESEAIKNLVNHIN-DDFQHIIDAILSCKGRVVITGIGKSAIIGNKIVA 64 Query: 153 KLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAI 212 L G A + A+ + D+++ IS +G E+ + + G ++ + Sbjct: 65 TLNSTGTPALFMHAADAIHGDLGMIQGGDVVICISKSGNTPEIKVLVPLIKNRGTILIGM 124 Query: 213 TGFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQ 261 G + L ++ + L E + N A ++ A ++ D L +AL++ Sbjct: 125 VGNVDSYLAVQSDYVLNVTVEREACPNNLAPTTSTTATLVMGDALAVALLE 175 >UniRef50_A6CXK8 D-arabinose 5-phosphate isomerase n=1 Tax=Vibrio shilonii AK1 RepID=A6CXK8_9VIBR Length = 323 Score = 101 bits (252), Expect = 2e-20, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 65/175 (37%), Gaps = 2/175 (1%) Query: 97 LVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMK 156 ++I A L + ++ +II++GIG SG + + A L Sbjct: 10 EYATQVINAEIAEAQKLLGRLEDNFAQAVSHIVNCQSKIIVSGIGKSGHIGKKMAATLAS 69 Query: 157 IGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT 216 G A V AL + + DL++ IS +G E + G ++ +TG T Sbjct: 70 TGSPAFFVHPAEALHGDLGMITKGDLVILISNSGESAEFKTMLPILKERGISIIGMTGNT 129 Query: 217 PNALQQRASHC--LYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPE 269 + L Q + + +E A S+ ++ D L I ++ + + Sbjct: 130 SSHLAQNSDCVVNIAIDSEACPLGLAPTSSAVNTLIMGDALAITAMKIRKFDSID 184 >UniRef50_A7MI97 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=A7MI97_ENTS8 Length = 247 Score = 101 bits (252), Expect = 2e-20, Method: Composition-based stats. Identities = 48/245 (19%), Positives = 93/245 (37%), Gaps = 39/245 (15%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 L+++++ + +Y+L +S++ +A++ + +SV + +K+GY G+ L+ Sbjct: 29 MNNLSRTERIVYEYILCNIHRLSGISAKMIASQTFTTTTSVNRVCKKMGYSGYTELRYKC 88 Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 L ++P + Q E+ + E L Sbjct: 89 GFPLQTKPHVSDKMSNGQ------------------------------EKDIAELCQQLH 118 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 A+ I L G + + L G + D+H L LL +S +G Sbjct: 119 QAQHIYLYARGGTLTSLSYLSRFLSIAGIPHLMLTDVHQLALIN-----KGTLLLVSKSG 173 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGM 250 + + A R +V+AIT ++L Q AS T A E A ++S+ +Q Sbjct: 174 ETKAIVEMARNAKRKNIRVMAITRN-NSSLSQVAS---RTWAVEDADEASSLYQRESQIK 229 Query: 251 LTDLL 255 + D + Sbjct: 230 ILDFI 234 >UniRef50_D0ZGM2 Sugar isomerase (SIS) n=5 Tax=Enterobacteriaceae RepID=D0ZGM2_EDWTE Length = 206 Score = 101 bits (252), Expect = 2e-20, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 67/177 (37%), Gaps = 3/177 (1%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKI 157 + + +A + E+ + + L R +I+++G+G SG+ A+ A L + Sbjct: 8 AQTAWQIYSAELTQLAQRLDAEQWQQLLDRLSGCRGKIMVSGVGTSGIAARKVAHMLACV 67 Query: 158 GFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTP 217 A + A + DDL++ IS G EL + G ++A+T Sbjct: 68 ERPAIYLNATDAAHGDLGFLRGDDLVILISRGGNSEELTRLLPALQAKGVPLIAVTENPR 127 Query: 218 NALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIR 272 +A+ + A L T E N + ++ L D L+Q+ + Sbjct: 128 SAIARAAQLTLATGVQREIDPLNMLATTSIILVLALFDAACACLMQRSGYDRQTLLS 184 >UniRef50_B4U6U7 KpsF/GutQ family protein n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6U7_HYDS0 Length = 319 Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 79/178 (44%), Gaps = 4/178 (2%) Query: 95 LRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILT-GIGASGLVAQNFAWK 153 ++ + I + A+ + +E+ + + ++ ++ ++ G+G SG +A+ A Sbjct: 4 VKDTALETISKEIEAVEGLKLLINED-FEKAIYVIHRSKGKVILTGVGKSGHIARKIAST 62 Query: 154 LMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 + +G A + AL + S +D++LA+S +G E+ + +G ++++T Sbjct: 63 MASVGTPAVFLHPNEALHGDLGIISKEDVVLALSNSGESAEILYMIPYIKMMGCFLISVT 122 Query: 214 GFTPNALQQRAS--HCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPE 269 + L +++ L E N A S+ A +L D + ++L++ + Sbjct: 123 NNKNSTLAKQSDISIVLNIEKEACPLNLAPTSSTTAMLVLGDAMAMSLLRLSGFKEED 180 >UniRef50_B0N5S7 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0N5S7_9FIRM Length = 263 Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 83/245 (33%), Gaps = 23/245 (9%) Query: 21 LADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPES 80 +A YL+ + LS +LA VS S V +F + LG + F K AL + + Sbjct: 30 IAKYLIANHENINSLSISELAKNTNVSISQVSRFVRSLGIESFSDFKEAL---VYHGEQK 86 Query: 81 PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGI 140 + +I + + T + E ++ + V +I + GI Sbjct: 87 RHTGLQREIIDYRVYQKMV-------TEEITYFYQNFDESRVDKLVYDFYKYPKIAIFGI 139 Query: 141 GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGV------RRE 194 S A+ + L+ G + + L ++++ + L++ S++G Sbjct: 140 LNSDNGAKELQYNLIGWGKICISYTNFQDQLDFIKSADSNTLIVIFSFSGNYVMKNGYSR 199 Query: 195 LNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDL 254 D + KV IT + + + + N L DL Sbjct: 200 FYHTYDYLKSSKAKVYVITKNNLVQELEYVNEVILVPIKHDLYNYT-------LQCLVDL 252 Query: 255 LFIAL 259 +F+ Sbjct: 253 IFMKY 257 >UniRef50_Q4FNC0 Arabinose 5-phosphate isomerase n=3 Tax=Candidatus Pelagibacter RepID=Q4FNC0_PELUB Length = 323 Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 65/171 (38%), Gaps = 1/171 (0%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWK 153 + + + +I A+ + + ++ ++IL G+G SGL+A + Sbjct: 5 NYKKIAKSVIDLEIKALKKLKDSINNSFNEAVESLANCQSKVILCGVGKSGLIAAKISAT 64 Query: 154 LMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 L +G + ++ + + S D+L+ ISY+G EL R ++ I Sbjct: 65 LSSVGTPSFSLSANDCSHGDLGSISKKDILILISYSGSTEELKNIIKYANRNKITLIGIM 124 Query: 214 GFTPNALQQRASHCLYTI-AEEQATNSASISACHAQGMLTDLLFIALIQQD 263 + L + + L E S+ Q + D L +A++ + Sbjct: 125 SKKNSILYKASDIKLLIPEVTEAGLGIVPTSSTINQLSIGDALAVAVLNKK 175 >UniRef50_B1I1Y6 Glucosamine--fructose-6-phosphate aminotransferase, isomerizing n=5 Tax=Bacteria RepID=B1I1Y6_DESAP Length = 609 Score = 101 bits (251), Expect = 3e-20, Method: Composition-based stats. Identities = 47/265 (17%), Positives = 79/265 (29%), Gaps = 27/265 (10%) Query: 25 LLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVP 84 LL L+ +LA V+ E V Sbjct: 196 LLAHTRDTYLLNDGELAEVT----PDGVRI---------SDF-----HGRPLAREIFQVH 237 Query: 85 IHNQIRGDDPLRLVGEKLIKENTAAMYATLN-VNSEEKLHECVTML-------RSARRII 136 + K I E A+ TL ++ + L ++ +I Sbjct: 238 WEAEQAEKAGYDHFMLKEIHEQPRALRDTLRGRIDDDCRRAVLDELNLEPGFVKNLNKIF 297 Query: 137 LTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELN 196 +T G + + + K+ V P DL++ +S +G + Sbjct: 298 VTACGTAFHAGVVGKYIIEKLVRLPVEVDIASEFRYRDPLIGPGDLVVVVSQSGETADTR 357 Query: 197 LAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLF 256 A E G +V+AIT +++ + A LYT A AS A Q LL Sbjct: 358 AALREAKSRGARVVAITNVVGSSIAREADSVLYTWA-GPEIAVASTKAYVTQLAAFYLLA 416 Query: 257 IALIQQDLELAPERIRHSEALVKKL 281 + L + L E +++L Sbjct: 417 VWLAGERGALPGEEREDLLRALREL 441 >UniRef50_C6A1J9 Bifunctional D-arabino 3-hexulose-6-phosphate formaldehyde lyase/phosphohexuloisomerase n=7 Tax=Thermococcaceae RepID=C6A1J9_THESM Length = 406 Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 79/206 (38%), Gaps = 23/206 (11%) Query: 91 GDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNF 150 K+I++ T + E++ V + A +I + G G SGLV + F Sbjct: 207 FWAEYMQTIVKVIQDITDHIKTVATSLKLEQVRGMVDAMIGANKIFIYGAGRSGLVGKAF 266 Query: 151 AWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVL 210 A +LM + FN V + A DLL+AIS +G R + AA+ GGKV+ Sbjct: 267 AMRLMHLDFNVYVVGET-----ITPAFEEGDLLIAISGSGETRTIVDAAEIAKNQGGKVV 321 Query: 211 AITGFTPNALQQRASHCLYTIAEEQATNSASISACH-----------------AQGMLTD 253 IT + + L + + + +A A + +L D Sbjct: 322 GITSYKNSTLGKLSDVVVEIPGRTKADIPTDYIARQMLTEYKWMAPMGTLFEDSTMLLLD 381 Query: 254 LLFIALIQQDLELAPERIRHSEALVK 279 + L+ + + + ++ A ++ Sbjct: 382 GVIALLM-ATFQKSEKDMKRKHATLE 406 >UniRef50_D0ALV4 Transcriptional regulator (Fragment) n=2 Tax=Enterococcus faecium RepID=D0ALV4_ENTFC Length = 192 Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 76/180 (42%), Gaps = 9/180 (5%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 L+++++ L +++ + S +L+ +A VS +++V+ +K GY+GF + K L Sbjct: 3 HKLSETEQYLWNFIEHLILEIPNYSIVKLSEQANVSTATIVRTMKKKGYEGFTSFKHHLK 62 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 E + D + + I +N + T+N+ + + + ++ Sbjct: 63 E---------GENKNINFSFLDKVDKGIRRAILKNEQEVVRTINMLEIGNIEDAIQRIKF 113 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGV 191 A R+ + G S ++ Q KL G N D + + + + D ++ +S G Sbjct: 114 ADRVFVFARGFSEMIGQEMLVKLQLTGKNCQMHTDPEIIKSISRKLTKKDSVIFVSLNGE 173 >UniRef50_Q8R841 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=25 Tax=Bacteria RepID=GLMS_THETN Length = 608 Score = 100 bits (250), Expect = 4e-20, Method: Composition-based stats. Identities = 41/257 (15%), Positives = 78/257 (30%), Gaps = 12/257 (4%) Query: 25 LLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVP 84 +L L ++A S + F +K+G F + E Sbjct: 196 ILKYTRNVYFLDDHEIAIIKKDSVEFIDVFGRKIGKSLFE------VKWDVEAAEKGGYE 249 Query: 85 IHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASG 144 + + + L L+ + K L +I + G + Sbjct: 250 HFMIKEIHEQPAAIKDTLRGRIINDSQIVLDNINITK-----EDLEKIEKIFIVACGTAY 304 Query: 145 LVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLR 204 + + V + L + IS +G + A E R Sbjct: 305 HAGVVGKYVIESFARIPVEVDVASEFRYRNPIVNERILTIVISQSGETADTIAALKEAKR 364 Query: 205 VGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDL 264 G +V+AIT +++ + A LYT A AS A Q + L+ + + Sbjct: 365 KGSRVIAITNVVGSSVSREADEVLYTWA-GPEIAVASTKAYTTQLIALYLIALDFALKKG 423 Query: 265 ELAPERIRHSEALVKKL 281 ++ ++ + +KKL Sbjct: 424 TMSSTKVVEIISELKKL 440 >UniRef50_Q1ZIS3 GutQ protein n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZIS3_9GAMM Length = 318 Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats. Identities = 38/163 (23%), Positives = 65/163 (39%), Gaps = 2/163 (1%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG 158 + K + A+ A E L M RII+ G+G SG + + + L +G Sbjct: 14 VRNVFKIQSDALDAHRKGLGTEYLDALDLMKSCTGRIIVCGMGKSGHIGKKISATLASVG 73 Query: 159 FNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPN 218 + + A + + +DLLL ISY+G E+ + G K+++ITG + Sbjct: 74 TPSFFMHPGEAFHGDLGMITTEDLLLLISYSGETDEVLKIIPSLQHFGNKIISITGAKDS 133 Query: 219 ALQQRASHCLY--TIAEEQATNSASISACHAQGMLTDLLFIAL 259 L + + L E N A ++ ++ D L L Sbjct: 134 TLAKNSDVVLVAAIQKETCPINLAPTTSTTLTLVIGDALSSVL 176 >UniRef50_C9B1X5 Putative uncharacterized protein n=2 Tax=Enterococcus casseliflavus RepID=C9B1X5_ENTCA Length = 266 Score = 100 bits (249), Expect = 6e-20, Method: Composition-based stats. Identities = 42/253 (16%), Positives = 78/253 (30%), Gaps = 14/253 (5%) Query: 23 DYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPS 82 ++L + LA VS SSV +F +K+G++ F LKL + + + Sbjct: 26 KFILCHLKEIHKYNISDLAKACCVSNSSVSRFCRKIGFQNFNELKLQFFQYTNTAEKKFF 85 Query: 83 VPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGA 142 P D I + LH + + + G Sbjct: 86 YPGVQCSNFKDSY-------IDGIIENLLLLKESICVTDLHRLAEDIVNYPNVAAFGSLH 138 Query: 143 SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVR--RELNLAAD 200 S NF L+ G L ++ + + L++ S G R L Sbjct: 139 SQSAVLNFQTDLLSSGIVMDTRICFQEQLEYMEQADCNTLIVLFSRGGSHLKRFLLHHLQ 198 Query: 201 EMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALI 260 R K++ IT A + +Y +E + +A + +L + + Sbjct: 199 LSKRKRPKIVMITANKNLASNKYIDQFIYYDEKE-----GFTAYPYAVEAIKGVLVLEVY 253 Query: 261 QQDLELAPERIRH 273 + + +R Sbjct: 254 RLVKQKKIINLRK 266 >UniRef50_Q9Z826 Uncharacterized protein CPn_0526/CP_0226/CPj0526/CpB0547 n=13 Tax=Chlamydiaceae RepID=Y526_CHLPN Length = 329 Score = 100 bits (249), Expect = 6e-20, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 60/171 (35%), Gaps = 3/171 (1%) Query: 97 LVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR-SARRIILTGIGASGLVAQNFAWKLM 155 V + ++ + A+ ++ + + + + +G+G SG VA+ L Sbjct: 9 DVCQDILGKQKEAVDFFFQAFQPKEAMQLAEKILGHSGWVFFSGVGKSGCVARKLVATLQ 68 Query: 156 KIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGF 215 + A + L + SP D++ S +G +EL + ++AIT Sbjct: 69 SLSERALFFSPVDLLHGDLGLVSPGDIVCLFSKSGETQELLDTVPHLKSRRAILVAITSM 128 Query: 216 TPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDL 264 + L + + + E N ++ Q + D L + L Sbjct: 129 PYSNLAALSDLVVILPSVAELDPFNLIPTNSTTCQMIFGDFLAMLLFHSRG 179 >UniRef50_A0RRT4 KpsF/GutQ n=18 Tax=Bacteria RepID=A0RRT4_CAMFF Length = 326 Score = 100 bits (249), Expect = 6e-20, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 72/178 (40%), Gaps = 3/178 (1%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWK 153 + + ++++ + + + + L ++I++G+G SGLV A Sbjct: 11 DILSIAKEVLSLEADELKRQVELLDFKFEKAVNLALSCKGKLIISGVGKSGLVGAKIAAT 70 Query: 154 LMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 L G + + AL + S +D +LAIS++G EL L + + G K++ + Sbjct: 71 LASTGTPSFFLHPTEALHGDLGMISQNDAVLAISFSGESSELLLILPHIKKRGIKIIGM- 129 Query: 214 GFTPNALQQRAS--HCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPE 269 + ++L+ + L + E +A + L D L + L+Q + Sbjct: 130 AKSGSSLEMLSDAFISLDIVREACPLGAAPTVSTTLTLALGDALAVCLMQLKEFKKED 187 >UniRef50_D2PN41 Arabinose-5-phosphate isomerase n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PN41_9ACTO Length = 278 Score = 100 bits (249), Expect = 6e-20, Method: Composition-based stats. Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 2/164 (1%) Query: 103 IKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAA 162 I+ AA+ A + L + +++TG+G SGLV + A L G A Sbjct: 88 IETEAAAVSALADRLDGVFLDVLTAVAGCQGHLVVTGLGKSGLVGRKIAATLASTGTPAT 147 Query: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222 + AL A + DL+LA+S +G E+ A + V+A+TG + L Q Sbjct: 148 FIHAGDALHGDSGAVTSRDLVLALSASGETAEVCAFARMLAERSIPVIAMTGAEHSTLAQ 207 Query: 223 RASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDL 264 A++ L T+ E N A ++ A ++ D L AL+ Sbjct: 208 LATYTLDTMVLREADPLNLAPTASTTAALVMGDALACALVVLRE 251 >UniRef50_O27589 Conserved protein n=6 Tax=Methanobacteriaceae RepID=O27589_METTH Length = 254 Score = 100 bits (249), Expect = 6e-20, Method: Composition-based stats. Identities = 44/217 (20%), Positives = 85/217 (39%), Gaps = 23/217 (10%) Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR 133 + S P+V I ++ + ++ ++ I++ + E L + +L SA Sbjct: 38 IRSDGPFPTVFISYRVYIGIGVAMIIKEAIRDIIHNLEKMERDIDERTLDNFIEILTSAA 97 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRR 193 + + G+G SGLVA+ FA +LM + NA V + A + D+L+AIS +G Sbjct: 98 NVFVLGLGRSGLVARAFAMRLMHLEINAFVVGET-----ITPAINEGDVLIAISGSGRTS 152 Query: 194 ELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI---------SA 244 + AA G KV+A+T + + L A + + + Sbjct: 153 YIVNAASIARERGAKVVAVTSYPDSDLAGLADLTVTIKGRTKIDGEKDYMKRQMRGNHHS 212 Query: 245 C--------HAQGMLTDLLFIALIQQDLELAPERIRH 273 + + D + L+++ + E + H Sbjct: 213 RTPLGTLFEISALVFLDGIIAELMER-FDKREEDLHH 248 >UniRef50_C4X1H8 Putative uncharacterized protein n=3 Tax=Klebsiella pneumoniae RepID=C4X1H8_KLEPN Length = 249 Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats. Identities = 48/242 (19%), Positives = 96/242 (39%), Gaps = 11/242 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + ++++ + + + ++A ++L S +LA AGVS +++ +FA+ +G Sbjct: 3 MDIVGQLQEGMRRFSAQESRVATFILQNLSFTASASIDELAASAGVSPATITRFARSVGC 62 Query: 61 KGFPALKLALSEALASQPESPSVPIHN-QIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 L+ L++A + + + D L +G L ++ + T Sbjct: 63 DDIRDLRKQLAQASERRASWLTPDSAALPVAWRDKLSSLGVTLTRQ----LGHTAE---- 114 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMK-IGFNAAAVRDMHALLATVQASS 178 + +C + L SAR + +GA + + G +D + T + Sbjct: 115 AAVEKCKSRLLSARAVHCFALGAQDVTLAALLQHQLLPSGIAINLCQDAALMRLTASTLN 174 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D LLL ++ L A + G ++A+T +AL AS L A+ Q Sbjct: 175 DDHLLLVLATAEANPVLQSATLQARTQGVTIIALT-PEQHALGDMASAILPLPADPQQAR 233 Query: 239 SA 240 A Sbjct: 234 YA 235 >UniRef50_A1SXE5 DNA-binding helix-turn-helix domain-containing transcriptional regulator protein n=2 Tax=Gammaproteobacteria RepID=A1SXE5_PSYIN Length = 272 Score = 100 bits (248), Expect = 7e-20, Method: Composition-based stats. Identities = 60/280 (21%), Positives = 108/280 (38%), Gaps = 20/280 (7%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RI + Y L ++D++LADYL + P+ LS+ ++A VS++SV +F +KLGY+ Sbjct: 8 LSERITKNYAQLTKNDQRLADYLQINPEKILILSTNEIAEACLVSKTSVSRFIRKLGYED 67 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 AL+ L A + + + ++ ++ S L Sbjct: 68 HLALRNELLAARDKGEPL-------------SVTALEDSEFRQEVHSLEQLWAQLSGMNL 114 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + + +A+R+ + G S +A +F +LM+ + + S D Sbjct: 115 EQLIKKIATAKRVKIIGYRNSYPLALHFRQQLMQCRSGVDLLPLPGQ--TIGEDLSSIDE 172 Query: 183 LLAISYTGVRRELNLAADEMLRV-GGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 I G+RR ++ A+ + ++ G L IT + Q SH L N A Sbjct: 173 DDFIIIIGIRRRVSNFANIISQLSGHDCLLITDQSGQKYAQSVSHFLVCY----MNNQAP 228 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + L L + A + R KL Sbjct: 229 LDSYAVPMSLISHLVNKTYRLLSSEAVKISRKISMNYSKL 268 >UniRef50_C3RNI1 Predicted protein n=2 Tax=Bacteria RepID=C3RNI1_9MOLU Length = 274 Score = 100 bits (248), Expect = 7e-20, Method: Composition-based stats. Identities = 30/240 (12%), Positives = 72/240 (30%), Gaps = 7/240 (2%) Query: 22 ADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESP 81 A +L + +A VS +++ + +KL Y+ F K+ ++ L Sbjct: 25 ARKILQNIYVIPGSTITDVAELCFVSTATISRLCRKLNYESFADFKIDITMNLNYFNRDT 84 Query: 82 SVPIHNQIRGD----DPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIIL 137 + + V + + T S E L V + A ++ Sbjct: 85 LRLQFDHQLPQRQYLHKGKEVFKAHFDNILDNLKETYESVSYEDLEFIVDKIHDANKVCF 144 Query: 138 TGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAIS-YTGVRRELN 196 G + V+ +L +G + + + + TV+ +D+++ S G + Sbjct: 145 AGNFFTQSVSMQLQIELSYLGKECSGMYPLEQQILTVEGLDENDVIIVSSIAGGFMTDHP 204 Query: 197 LAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLF 256 + + + I+ L + + + + L+ Sbjct: 205 DVMRVISKSPAYKIVISQLDEFVYSDSIDMILKVGTDHHSLIGKFSITYI--FEVLEALY 262 >UniRef50_Q048M7 Transcriptional regulator n=2 Tax=Lactobacillus delbrueckii subsp. bulgaricus RepID=Q048M7_LACDB Length = 251 Score = 100 bits (248), Expect = 7e-20, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 81/239 (33%), Gaps = 23/239 (9%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L++SD+K+ + L+ LA EAG S +SV +F QK+GY Sbjct: 1 MDITNFFTVETSELSKSDRKIMKRMTSDLTNVESLTINHLAEEAGTSLASVQRFCQKMGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF K L + Q + + D ++ T N E Sbjct: 61 SGFKEFKFQLLTYIKKQESQEAAVSSS--EYLDDYHDAINRV---------WTANEKDAE 109 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L +L ++ + GI S L A+ + + +G + ++ A S + Sbjct: 110 EL---AEVLATSSTNFIFGIYYSELPARLLSMGMRDLGKSTYFGDNLAAGEHLFPLSDEN 166 Query: 181 DLLLAISYTGVRR-----ELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE 234 + S +G+ + L + +T L++ + + Sbjct: 167 STAVFYSVSGISKLFGSSPLPKSISHFKHS----YLVTMNPDTPLKKYFKKVIVLPGKN 221 >UniRef50_C8S7V2 6-phospho 3-hexuloisomerase n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8S7V2_FERPL Length = 189 Score = 99.6 bits (247), Expect = 9e-20, Method: Composition-based stats. Identities = 43/192 (22%), Positives = 82/192 (42%), Gaps = 15/192 (7%) Query: 97 LVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMK 156 + K + +EE L+E + ++ A+RI + G G SG VA+ FA +LM Sbjct: 4 EMIYKFFDTVKKFIDQIKADINEENLNELINAIQGAKRIFVMGAGRSGFVAKAFAMRLMH 63 Query: 157 IGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRV-GGKVLAITGF 215 +G+N V + +D+L+AIS +G + + + + G K++AITG Sbjct: 64 LGYNVYVVGET-----VTPRIDKEDVLIAISGSGETTSVVNISKKAKEMIGSKLVAITGN 118 Query: 216 TPNALQQRASHCLYT------IAEEQATNSASISACHAQGMLT--DLLFIALIQQDLELA 267 ++L Q + + E+ + A + L D L L+ + L+ Sbjct: 119 PNSSLAQMSDVVVLIKGKLKNETNEELSQIAPLGTMFELMSLIFLDGLVAELM-RIKNLS 177 Query: 268 PERIRHSEALVK 279 + + A+++ Sbjct: 178 EKDLAERHAVLE 189 >UniRef50_C3MFV3 Sugar isomerase, KpsF/GutQ family protein n=8 Tax=Rhizobiaceae RepID=C3MFV3_RHISN Length = 336 Score = 99.6 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 31/139 (22%), Positives = 60/139 (43%), Gaps = 2/139 (1%) Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVR 192 R++++G+G SG + + A L G +A V A + + DD+L+ +S++G Sbjct: 60 GRVVVSGVGKSGHIGRKIAATLASTGTSAYFVHPTEASHGDLGMVTSDDVLILLSWSGET 119 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGM 250 EL R +++I+ + L + + L E A ++ Q Sbjct: 120 AELANMLTYAKRFKVPIVSISSNRDSILARNSEIALVLPKVPEACPHGLAPTTSAMLQLA 179 Query: 251 LTDLLFIALIQQDLELAPE 269 + D L IAL+++ A + Sbjct: 180 VGDALAIALLERRGFSAED 198 >UniRef50_D0SVQ9 Arabinose 5-phosphate isomerase n=2 Tax=Acinetobacter RepID=D0SVQ9_ACILW Length = 347 Score = 99.6 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 64/174 (36%), Gaps = 4/174 (2%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA-RRIILTGIGASGLVAQNFAW 152 + V + ++ A+ ++ ++ R+++TG+G SG + + A Sbjct: 28 DFQKVALETLRIEENALQILATQID-DRFSRACEIILQCTGRLVITGMGKSGHIGRKMAA 86 Query: 153 KLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAI 212 G + + A + D+L+AIS +G E+ + + + ++ I Sbjct: 87 TFASTGTPSFFMHPGEAGHGDLGMLVAGDVLIAISNSGKSDEIMMLMPLIKHLEIPLITI 146 Query: 213 TGFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDL 264 +G + Q A L E A S+ A L D L +AL+ Sbjct: 147 SGDDRGPMPQNADVALTLGNIQEACPLGLAPTSSTTATLALGDALAVALLDARG 200 >UniRef50_C9AU51 Predicted protein n=2 Tax=Enterococcus casseliflavus RepID=C9AU51_ENTCA Length = 268 Score = 99.6 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 39/247 (15%), Positives = 91/247 (36%), Gaps = 15/247 (6%) Query: 18 DKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQ 77 + +LA + L + + Q+A E VS++S+ +FA++LGY+ F +K + Sbjct: 25 EFELAKFFLENFKSVTRWNIYQIAEEQHVSRASIRRFAKQLGYENFLDMK---------K 75 Query: 78 PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIIL 137 N+ KL T+ M + +++ V ++ +R +++ Sbjct: 76 NAETFDDGINEFLRFYGYPNFLTKLQDNITSLMEELSLRFNTQEVDRLVRLINDSREVMI 135 Query: 138 TGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNL 197 + F +++ G + L ++ D L++ S +G+ ++ Sbjct: 136 LCSSNITGSVKTFQQRMVIFGKRITLLTSKSDLTLALEH-YQDPLIIVFSLSGL--FVSS 192 Query: 198 AADEMLRVGGKVLAITGFTPNALQQRAS--HCLYTIAEEQATNSASISACHAQGMLTDLL 255 + + V + T + + L + E+ N + + + DLL Sbjct: 193 MLEILKEVKAPTILFTNNRNPIYNRYFDKLYHLSSQTHEKEIN-ELLYYTYGIDFVLDLL 251 Query: 256 FIALIQQ 262 F + + Sbjct: 252 FNGYLLK 258 >UniRef50_B5I9S2 SIS domain protein n=2 Tax=Aciduliprofundum boonei T469 RepID=B5I9S2_9EURY Length = 178 Score = 99.6 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 8/183 (4%) Query: 98 VGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKI 157 + + + ++ +LN ++ V M+ A++I + G G SGLV + FA +L+++ Sbjct: 1 MFKDSYEYILESIEKSLNSIDVSLVNHGVDMITEAKQIFVYGSGRSGLVGKFFAMRLVQL 60 Query: 158 GFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTP 217 G A + + + DL++ IS TG + L + RVG KV+AIT Sbjct: 61 GLVAYFIGET-----ITPVVNKGDLVVLISNTGRTQSTLLVESIVKRVGAKVIAITSSAK 115 Query: 218 NALQQRASHCLYTIAEEQATNSASISACH--AQGMLTDLLFIALIQQDLELAPERIRHSE 275 + L + A E++ A + A + D + +L+ + E +R Sbjct: 116 SPLAKHADLTFVIRYEKEKGELAPLGTLFEDAAVVFLDSIISSLMNKLG-QTEEDMRRRH 174 Query: 276 ALV 278 A+ Sbjct: 175 AIW 177 >UniRef50_D1YX72 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Methanocella paludicola SANAE RepID=D1YX72_METPS Length = 608 Score = 99.6 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 69/180 (38%), Gaps = 1/180 (0%) Query: 95 LRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKL 154 + + L + + A +L + +RII+ G S + + Sbjct: 255 IHEQPKSLNDAMISRVDALKGTIDLPELGLTKEQVNQFKRIIIVACGTSYHAGLLGKYAI 314 Query: 155 MKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITG 214 ++ +V + + D L++AIS +G + A + ++ G V+AIT Sbjct: 315 ERLTDLPVSVEIGSEFRYAARRLTQDALIIAISQSGETADTIAAVKDAVQKGIHVIAITN 374 Query: 215 FTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 + + + A +Y A A+ +Q M+ LL + L +Q +AP+ ++ Sbjct: 375 VFGSTITREAPSTIYMHA-GPEIGVAATKTFTSQVMILYLLALYLSKQRDTVAPQELKQM 433 >UniRef50_D1Y338 Arabinose 5-phosphate isomerase n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y338_9BACT Length = 340 Score = 99.6 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 63/166 (37%), Gaps = 2/166 (1%) Query: 101 KLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFN 160 ++++ + + E + + RI+++GIG +G + + A L +G Sbjct: 28 QVLRHEAEELVRAADRFGLELVRAARLLEACKGRIVVSGIGKAGHIGRKIAATLSSLGTP 87 Query: 161 AAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNAL 220 + ++ A + +D+ L IS +G E+ R+G V+A++G + L Sbjct: 88 SFFLQASEAAHGDLGMVRHEDVALLISNSGKTAEVVALLPFFRRIGAPVIAVSGDAASPL 147 Query: 221 QQRASHCLY--TIAEEQATNSASISACHAQGMLTDLLFIALIQQDL 264 A L E N A S+ Q + D L + Sbjct: 148 ALGADIFLNSAIEREADPLNLAPTSSTTLQLAIGDALGAMVTLLRG 193 >UniRef50_B1C5Y4 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C5Y4_9FIRM Length = 200 Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 25/173 (14%), Positives = 73/173 (42%), Gaps = 3/173 (1%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILT-GIGASGLVAQNFAW 152 + V ++++ A+ V +K+ + V + + + ++ G G+S A A Sbjct: 6 NNKEVLKEMLNREVNAVNNLSKVLDFDKIDKAVEKIANCKGNVIFAGCGSSSTAAFRAAN 65 Query: 153 KLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAI 212 + + A+ M+AL D+ + IS +G EL + ++G ++ + Sbjct: 66 IYNFLYIPSVAINVMNALHGEYGMIREGDIFIPISKSGNTEELVQSIPIAKKLGAYIIGL 125 Query: 213 TGFTPNALQQRASHCLYTIAEEQATNSA--SISACHAQGMLTDLLFIALIQQD 263 T + + + + + + ++ + + S+ ++ D++ A+++++ Sbjct: 126 TENDNSYIAENSHIAITFNSLKELDDKDMVATSSTTCSSIILDIIGGAVMKKN 178 >UniRef50_Q1N8R1 Sugar isomerase, KpsF/GutQ n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N8R1_9SPHN Length = 358 Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 63/150 (42%), Gaps = 2/150 (1%) Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L +++ R+I+TGIG SG+VA+ L G A + A + +PDD Sbjct: 71 LRMVGMLMKVRGRVIVTGIGKSGIVARKMTATLTSTGTPAIFLHPADAGHGDLGMVTPDD 130 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA--EEQATNS 239 ++L +S++G EL R ++ +T + + Q A C+ E Sbjct: 131 VVLMLSHSGESTELGPIIQYCKRFAVPLMGMTAQPQSTVAQAADVCILMPDVQEACPNAL 190 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPE 269 A ++ Q D L ++L++ A + Sbjct: 191 APTTSTTVQMAFGDALAVSLMEMRGFSADD 220 >UniRef50_A6VUC5 KpsF/GutQ family protein n=12 Tax=Bacteria RepID=A6VUC5_MARMS Length = 342 Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 38/175 (21%), Positives = 70/175 (40%), Gaps = 4/175 (2%) Query: 90 RGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQ 148 D L + + A+ N E+ + V M+ +++ R I+ G+G SGL+ + Sbjct: 27 THSDILIDSARRTLSTQAQALANLANQV-TEEFPKAVRMILASKGRTIICGMGKSGLIGK 85 Query: 149 NFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGK 208 A L G + + A + P+D+L+ IS++G EL + G Sbjct: 86 KIAATLASTGTPSFFLHPGEAFHGDLGMIQPEDVLVLISFSGETEELMRLLPSLKSFGNP 145 Query: 209 VLAITGFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQ 261 +A+ G + L + L E N A ++ + D L +AL++ Sbjct: 146 SIAMVGNIDSTLAKHCDCVLDLSIDKETCPNNLAPTTSTTMTTAMGDALAVALME 200 >UniRef50_Q723E8 SIS domain protein n=15 Tax=Firmicutes RepID=Q723E8_LISMF Length = 200 Score = 98.5 bits (244), Expect = 2e-19, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 61/168 (36%), Gaps = 3/168 (1%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA-RRIILTGIGASGLVAQNFAWKLMKI 157 + +E A+ V SEE L + V + +I++ G G SG+ A+ I Sbjct: 10 IHQTWQEEANAISRLPEVTSEEALVKTVEKIAECTGKIVVAGCGTSGVAAKKLVHSFNCI 69 Query: 158 GFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTP 217 A + A+ T+ +D+L+ IS G EL G ++ +T Sbjct: 70 ERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTENPD 129 Query: 218 NALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQD 263 + + + A E N + ++ A D + + L+ Sbjct: 130 SVIAKEADIFFPVSVSKEPDPFNMLATASTMAVIASFDAVIVCLMTYM 177 >UniRef50_C1I4S5 Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I4S5_9CLOT Length = 270 Score = 98.5 bits (244), Expect = 2e-19, Method: Composition-based stats. Identities = 40/263 (15%), Positives = 90/263 (34%), Gaps = 19/263 (7%) Query: 15 AQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEAL 74 + + +A+ LL D+ ++++ ++A+ VS+S++ KF + +G+ F LK A + Sbjct: 19 SSTYYHIANILLCNYDSIQNMTISEVADLCFVSKSTISKFTRHIGFDDFLELKAA-ASYR 77 Query: 75 ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARR 134 +++ + N I + E+ + + + K+ E L + Sbjct: 78 SNKSSNYLNYNDNIIGFMEN--HTKEEYVDTIINDLELIKSNIDMNKIEELAKDLIKYDK 135 Query: 135 IILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRE 194 + G+ S A +F KL G + ++ + D L++ + +G + Sbjct: 136 VAAFGLLYSESAAMDFQTKLAYNGKYIISHMHDIKQDEFIKNAKEDTLIIIFTNSGNYIK 195 Query: 195 LNLAAD------EMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 + K++ IT C+ S+ Sbjct: 196 KYQMMQGNINKNVFKQTKAKIVVITANRNMENHPYVDLCIDFQH----------SSEVQT 245 Query: 249 GMLTDLLFIALIQQDLELAPERI 271 + + I + ERI Sbjct: 246 HAILYQVITDFITFKYKKLKERI 268 >UniRef50_A1RWB5 Glutamine--fructose-6-phosphate transaminase n=11 Tax=Thermoprotei RepID=A1RWB5_THEPD Length = 613 Score = 98.5 bits (244), Expect = 2e-19, Method: Composition-based stats. Identities = 37/202 (18%), Positives = 70/202 (34%), Gaps = 11/202 (5%) Query: 89 IRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQ 148 + + K I E + T+ + +L A I + G S + Sbjct: 255 LARKEGFPHYMLKEIHEQPRVIAETIRGFGPD-YERGAELLSDAEVIYVVASGTSYHASL 313 Query: 149 NFAWKLMKI-GFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGG 207 FA MKI G + ++S D LLA+S +G + +A G Sbjct: 314 YFALLTMKIAGKKVIPLISSEYAGYV-SSASERDALLAVSQSGETIDTLMAMRAFKERGV 372 Query: 208 KVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALI------- 260 + +++T + + + + H +Y A A+ Q L + Sbjct: 373 RTVSLTNVIGSVISRESDHQVYMKA-GPEIGVAATKTFTVQLTALTWLSALIARNVGAMD 431 Query: 261 QQDLELAPERIRHSEALVKKLV 282 ++D E ER++ L +K++ Sbjct: 432 EKDAESLLERMKKIPDLAEKVI 453 >UniRef50_O68956 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=108 Tax=Bacteria RepID=GLMS_MYCS2 Length = 628 Score = 98.5 bits (244), Expect = 2e-19, Method: Composition-based stats. Identities = 42/275 (15%), Positives = 78/275 (28%), Gaps = 28/275 (10%) Query: 21 LADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK------GFPALKLALSEAL 74 +A ++ A L ++A V + + G F + Sbjct: 205 VAAFI-EHTRDAVELGQ----DQAVVLTADGYRITDFAGNDHLEAGRDFREFHIDWDLNA 259 Query: 75 ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARR 134 A + + + +N + S+++L E + A Sbjct: 260 AEKGGYDYFMLKEIAEQPSAVADTLLGHFDKNRIVLDE--QRLSDQELREIDKVFIVACG 317 Query: 135 IILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRE 194 SGL+A+ ++ L++AIS +G + Sbjct: 318 T----AYHSGLLAKYAIEHWTRLPVEVEL---ASEFRYRDPVLDRSTLVIAISQSGETAD 370 Query: 195 LNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDL 254 A KVLAI + + + A LYT A A+ AQ L Sbjct: 371 TLEAVRHAKTQKAKVLAICNTNGSQIPREADAVLYTRA-GPEIGVAATKTFLAQIAANYL 429 Query: 255 LFIALIQQDLELA-------PERIRHSEALVKKLV 282 + +AL Q + L+K+++ Sbjct: 430 VGLALAQARGTKYPDEVAREYRELEAMPDLIKRVL 464 Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 13/152 (8%), Positives = 41/152 (26%), Gaps = 12/152 (7%) Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF-NAAAVRDMHALLATVQAS 177 + + + ++ G VA A KL ++ + +A + Sbjct: 467 MDSVAALAERFAPSSTVLFLGRHVGYPVALEGALKLKELAYMHAEGFAAGELKHGPIALI 526 Query: 178 SPDDLLLAISYTGVRRELNLA-----ADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA 232 + ++ + + + A E+ G + I + ++ A H + + Sbjct: 527 DENLPVIVVMPSPKNAAMLHAKLLSNIREIQARGAVTVVIAEEDDDTVRPYADHLIEIPS 586 Query: 233 EEQATNSASISACHAQGMLTDLLFIALIQQDL 264 + + + + + Sbjct: 587 VSTLFQ--PLLSTIP----LQVFAAGVARARG 612 >UniRef50_B1C072 Putative uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=B1C072_9FIRM Length = 605 Score = 98.5 bits (244), Expect = 2e-19, Method: Composition-based stats. Identities = 30/209 (14%), Positives = 64/209 (30%), Gaps = 8/209 (3%) Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNV-------NSEEKLH 123 E + + +P N+ K I E + TL +L Sbjct: 224 QEGIEISKKPTHIPYDNESAKKGGYDTFMLKEIHEQPYVISETLRGRIKDNDCIVLPELD 283 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 + ++ R+ G + + A + ++ ++ + L Sbjct: 284 QLKEKFKTFNRVYFVACGTAYHACLSGANVMERLTKLPTFIQVASEFRYSNPIIDDKTLC 343 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + +S +G + A G +AI + + + A+ +YT A AS Sbjct: 344 IFVSQSGETADTLAALRLAKAKGCTTIAIANVLGSTISREAAATIYTCA-GPEIAVASTK 402 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIR 272 A Q ++ LL + + Q + + Sbjct: 403 AYTTQIIVLLLLAMYIAQSLGKEDEDYRE 431 >UniRef50_B7ATA5 Putative uncharacterized protein n=4 Tax=Bacteria RepID=B7ATA5_9BACE Length = 635 Score = 98.5 bits (244), Expect = 2e-19, Method: Composition-based stats. Identities = 35/227 (15%), Positives = 74/227 (32%), Gaps = 14/227 (6%) Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLN------VNSEE 120 K+ + E + K I E A+ T+ + Sbjct: 248 KICDIHGMEINKELQTADWDEDAAEKGGYEHFMLKEIHEQPTAVRTTITPRIVNGMPDFA 307 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + L S R+I + G + + + K+ + V + Sbjct: 308 SDGIDINKLSSYRQIFIVACGTAMHAGMVGKYVIEKMARVSVTVDIASEFRYRDPLITDK 367 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++ IS +G + + LA+ +++ + A H +YT A + A Sbjct: 368 DLVIVISQSGETADTLAVLKLAKEMKAATLAVVNVKGSSIAREADHVIYTHA-GPEISVA 426 Query: 241 SISACHAQGMLTDLLFIALIQQDLE-------LAPERIRHSEALVKK 280 S A Q + L+ AL ++ E++++ A++++ Sbjct: 427 STKAYMVQVAVMYLIAFALSRETGHITDAQCAEFTEKLKNIPAVIEE 473 >UniRef50_Q6MHW0 Glucosamine--fructose-6-phosphate aminotransferase (Isomerizing) n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MHW0_BDEBA Length = 628 Score = 98.5 bits (244), Expect = 2e-19, Method: Composition-based stats. Identities = 29/225 (12%), Positives = 76/225 (33%), Gaps = 9/225 (4%) Query: 58 LGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 + +G+ + + + QP + + I + + + + + ++ ++ Sbjct: 243 VEKQGYAHF---MLKEIYEQPRAVAAAIEPHVNP-ETFSVALKNVGFG-GQSVQKLEELD 297 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 ++ + + +S R+ + G S + + ++ Sbjct: 298 AKADWAKTQEVFKSIERVFIIACGTSNYAGNVGKYLIEQLAKVPVECDIASEFRYRNPVI 357 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 L++ IS +G + A +G L+I + + + A LY + Sbjct: 358 PAKSLVITISQSGETADTLAAIRMAKEMGATTLSICNVKNSTIDREAHGHLYMNS-GPEI 416 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 AS A + + + L IA+ + ++ + LVK L+ Sbjct: 417 GVASTKAFTSTMAVLNTLAIAIARTRGVMSEA---EEKELVKSLL 458 Score = 43.4 bits (101), Expect = 0.008, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 41/112 (36%), Gaps = 2/112 (1%) Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF-NAAAVRDMHALLATVQASSPD 180 E + L+ R + G G S +A A KL ++ + +A + Sbjct: 474 FEEAASSLKLFRGFLYMGRGTSFPIAMEGALKLKELAYMHAEGYAAGEMKHGPLALIDER 533 Query: 181 DLLLAISYTGVRRE-LNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI 231 ++ ++ T E +E GGKV++I L++ + H L Sbjct: 534 MAIVMVAPTDHLYEKTISNLEEARARGGKVISIGTGDNEKLREISEHYLAIP 585 >UniRef50_D2TXX6 Hex regulon repressor (RpiR-family transcriptional regulator) n=1 Tax=Arsenophonus nasoniae RepID=D2TXX6_9ENTR Length = 193 Score = 98.1 bits (243), Expect = 3e-19, Method: Composition-based stats. Identities = 36/147 (24%), Positives = 72/147 (48%), Gaps = 4/147 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L +I ++ L +S+KK+A+ +L+ P A HL L A VS+++V + +++ Sbjct: 1 MNILEQINNSFENLNKSEKKVANLILVNPQNAIHLCIAALVKLANVSETTVNRLCRRMDT 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGFP KL L+++L + S + + + +K+ + A + + + Sbjct: 61 KGFPNFKLRLTKSLPNGASYFSRLLDQDV----TVISYRQKVFQSAIAELGIVKDNLNTT 116 Query: 121 KLHECVTMLRSARRIILTGIGASGLVA 147 +++ + +L ++I GIG A Sbjct: 117 RINRAIDLLTQIKKIAFFGIGFRAAYA 143 >UniRef50_A9A435 Glucosamine--fructose-6-phosphate aminotransferase, isomerizing n=4 Tax=Thaumarchaeota RepID=A9A435_NITMS Length = 586 Score = 98.1 bits (243), Expect = 3e-19, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 64/213 (30%), Gaps = 6/213 (2%) Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 +++ + E V K I E + S E + Sbjct: 219 FQISDFNGEQTGYEITKVSKEFGDAYKGDYAHFTLKEIYEQPETILKAGEKTSSE-IEAA 277 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 +R A+ I +TG G S A L K L + +L+A Sbjct: 278 TDYIRQAKNIYITGSGTSYNSALIAKQILSKYVKIKTESIMSSELQFDPNIIEENSILIA 337 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 IS +G ++ A K++AI ++L + A + A+ + Sbjct: 338 ISQSGESADVLEAVKIAKNANCKIIAIVNLVTSSLAREADVVIGLNC-GPEIGVAATKSF 396 Query: 246 HAQGMLTDLLFIALIQQ----DLELAPERIRHS 274 +Q ++ + L + E + I + Sbjct: 397 TSQLVILYKIVQKLSNNDITINFEDFSKSISKT 429 >UniRef50_C0D3Y2 Putative uncharacterized protein (Fragment) n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D3Y2_9CLOT Length = 159 Score = 97.7 bits (242), Expect = 4e-19, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 69/134 (51%), Gaps = 1/134 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L+R+ + + ++ ++ Y+L P+ A LS +L+ A S +++V+ ++LG+ Sbjct: 27 SVLVRLNEYQLQMTPAESEVVQYILHHPEKAAELSVHELSARAFSSSATIVRMCRRLGFD 86 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ L+ +L LA + +S + +D L + +K+ +N ++ T N+ Sbjct: 87 GYKELRRSLQYELAVRKQSEMEKRDE-VSREDSLEQMVDKITYKNIVSLEETKNLVDLPV 145 Query: 122 LHECVTMLRSARRI 135 L +CV ++ AR I Sbjct: 146 LQKCVDLMCVARNI 159 >UniRef50_Q9LBW5 3-hexulose-6-phosphate isomerase n=2 Tax=Actinomycetales RepID=PHI_MYCGS Length = 199 Score = 97.3 bits (241), Expect = 5e-19, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 65/182 (35%), Gaps = 12/182 (6%) Query: 103 IKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAA 162 + + T E++ + R+ + G G SGLV + A +LM G Sbjct: 22 LSLVRDEVADTAAKVDPEQVAVLARQIVQPGRVFVAGAGRSGLVLRMAAMRLMHFGLTVH 81 Query: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222 D S DLLL S +G + +A+ + G ++ A T + L Sbjct: 82 VAGDTTTPA-----ISAGDLLLVASGSGTTSGVVKSAETAKKAGARIAAFTTNPDSPLAG 136 Query: 223 RASHCLYTIAEEQATNSASISACHA-------QGMLTDLLFIALIQQDLELAPERIRHSE 275 A + A ++ + + IS +A ++T+ +F +L A E Sbjct: 137 LADAVVIIPAAQKTDHGSHISRQYAGSLFEQVLFVVTEAVFQSLWDHTEVEAEELWTRHA 196 Query: 276 AL 277 L Sbjct: 197 NL 198 >UniRef50_UPI000196C61B hypothetical protein CATMIT_02058 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196C61B Length = 630 Score = 97.3 bits (241), Expect = 6e-19, Method: Composition-based stats. Identities = 32/214 (14%), Positives = 63/214 (29%), Gaps = 9/214 (4%) Query: 77 QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM----LRSA 132 E ++P + + K I E + TL + + Sbjct: 260 TKEMTTIPYDMEAAQKNGYDTYMLKEINEQPHVIQETLRGRIFKDSIVLDELKDVDFNKF 319 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVR 192 ++ G + A L + + L + +S +G Sbjct: 320 NKVYYVACGTAYHAGLCGASILERATRLPVLTQVASEFRYNDPIIDEKTLCIFVSQSGET 379 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLT 252 + A G +A+T + + + A + LYT A AS A Q +L Sbjct: 380 ADTLAALKLANEKGCTTIAVTNVLGSTISRDAQYTLYTCA-GPEIAVASTKAYTTQLVLL 438 Query: 253 DLLFIALIQQDLE----LAPERIRHSEALVKKLV 282 L+ + + + E++ + V KL+ Sbjct: 439 TLIALYIANKRDNAINTDLMEQLNNLPEYVSKLL 472 >UniRef50_A5VTJ4 Sugar isomerase, KpsF/GutQ n=36 Tax=Rhizobiales RepID=A5VTJ4_BRUO2 Length = 359 Score = 96.9 bits (240), Expect = 6e-19, Method: Composition-based stats. Identities = 46/201 (22%), Positives = 77/201 (38%), Gaps = 5/201 (2%) Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 K L+ + + + LR + K A+ LN E V Sbjct: 19 KKRLTLCAMEKLDITQKLADAEAAITSALRTI--KTENAGLVALEEALNNGLSGPFVEAV 76 Query: 127 TMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 + ++R R+++TG+G SG + A G +A V A + +D++LA Sbjct: 77 ERIVASRGRLVVTGVGKSGHIGSKLAATFASTGTSAFFVHSGEANHGDLGMIGLEDVILA 136 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI--AEEQATNSASIS 243 IS++G EL + R ++AIT +AL + A L E A + Sbjct: 137 ISWSGETVELKGIVNYSQRFRIPLIAITSRQDSALGRAADVVLLLPKATEACPHGLAPTT 196 Query: 244 ACHAQGMLTDLLFIALIQQDL 264 + Q + D L IAL++ Sbjct: 197 STMMQLAIGDALAIALLEARG 217 >UniRef50_Q9YCQ6 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=9 Tax=Thermoprotei RepID=GLMS_AERPE Length = 617 Score = 96.9 bits (240), Expect = 7e-19, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 58/166 (34%), Gaps = 2/166 (1%) Query: 94 PLRLVGEKLIKENTAAMYATLN-VNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAW 152 K I E A+ T + + L ++ A R+++ G G S + Sbjct: 261 GYPHFMLKEIYEQPRALAETFEGIIEDPALLRAAGLVAGAGRLLIVGAGTSFHAGLVGHY 320 Query: 153 KLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAI 212 L ++ + +++A+S +G + A E G +V+ + Sbjct: 321 YLSRLAGILGHPVVASEHKVYTPGVDGETVVVAVSQSGETYDTLEAVREWRGRGARVIGV 380 Query: 213 TGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIA 258 T +AL + A LY A A+ AQ +L L IA Sbjct: 381 TNVVGSALDREADVTLYLRA-GPEIGVAATKTFLAQTILLQTLSIA 425 >UniRef50_Q9F5F9 Riorf33 protein n=1 Tax=Agrobacterium rhizogenes RepID=Q9F5F9_AGRRH Length = 251 Score = 96.6 bits (239), Expect = 9e-19, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 89/259 (34%), Gaps = 17/259 (6%) Query: 25 LLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVP 84 ++ LSS +LA A VSQ SV +FA LG+ G+ ++ L A Sbjct: 1 MIENSAQLGFLSSMELAELANVSQPSVTRFAVALGFDGYLEMRKFLRTAQPGPDVPAEGQ 60 Query: 85 IHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASG 144 + +L + +EE + + L ++R + + G+ AS Sbjct: 61 SNRYQAALLAEAANLTELAQGFA----------NEEAIDQFGKALAASRPLAVLGLRASA 110 Query: 145 LVAQNFAWKLMKIGFNAAAVRDMHALLAT---VQASSPDDLLLAISYTGVRRELNLAADE 201 +A FA+ K+ + + +L+ ++ +L RE A + Sbjct: 111 GLATQFAYFAAKVHPDIRLLASGGSLIEDQIEQCYAAGGRTMLVFMMPLYPRETLKAVEL 170 Query: 202 MLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQ 261 G K+ +T + A + L + + A L +L ++ Sbjct: 171 ARNAGMKIALVTDAGFTDHEGIADYLLTPRVNSRLV----FDSHAAASALVSVLLDSMCT 226 Query: 262 QDLELAPERIRHSEALVKK 280 A +R+ + K+ Sbjct: 227 NMNGAAQKRLDAIDRSSKR 245 >UniRef50_O28478 Uncharacterized protein AF_1796 n=1 Tax=Archaeoglobus fulgidus RepID=Y1796_ARCFU Length = 183 Score = 96.6 bits (239), Expect = 9e-19, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 80/188 (42%), Gaps = 16/188 (8%) Query: 101 KLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFN 160 + ++ + + N E + E + ++ SAR I + G G SG +A+ FA +LM +G+ Sbjct: 3 RFLEVVSEHIKNLRNHIDLETVGEMIKLIDSARSIFVIGAGRSGYIAKAFAMRLMHLGYT 62 Query: 161 AAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNAL 220 V + + D+L+AIS +G + + + +G K++A+TG ++L Sbjct: 63 VYVVGET-----VTPRITDQDVLVAISGSGETTSVVNISKKAKDIGSKLVAVTGKRDSSL 117 Query: 221 QQRASHCLYTIAEEQATNSASISACHA---------QGMLTDLLFIALIQQDLELAPERI 271 + A + + + I + A + D L ++ Q L + + Sbjct: 118 AKMADVVMVVKGKMKQERDE-ILSQLAPLGTMFELTAMIFLDALVAEIMMQ-KHLTEKDL 175 Query: 272 RHSEALVK 279 A+++ Sbjct: 176 EARHAVLE 183 >UniRef50_B9KZ32 Glucosamine--fructose-6-phosphate aminotransferase, isomerizing n=3 Tax=Bacteria RepID=B9KZ32_THERP Length = 603 Score = 96.6 bits (239), Expect = 9e-19, Method: Composition-based stats. Identities = 34/223 (15%), Positives = 71/223 (31%), Gaps = 17/223 (7%) Query: 75 ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAM-YATLNVNSEEKLHECVTMLRSAR 133 + + K I E + + ++R + Sbjct: 242 RRSARWEPLTLRPADTSLGGYPHYLIKEIHEQPRVLARIARERLDGA--RQLADLIRHSY 299 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRR 193 L G G +G A ++ +I + L++A++ +G Sbjct: 300 GTFLVGCGTAGYAALCGSYLFSRIARRHVNAVIASEFKYQEHFLTDRSLVIALTQSGETI 359 Query: 194 ELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGML 251 ++ A R G V A+ T + + + A + A E+ ++ + +A A +L Sbjct: 360 DVIEAVHAAKRRGATVAALVNVTGSTVARLADFTIPLSAGPEQSVLSTKAYTAKLAILLL 419 Query: 252 ------------TDLLFIALIQQDLELAPERIRHSEALVKKLV 282 D L+ A+ ++ LAP + A+ +LV Sbjct: 420 TAHILNGSEHVGLDTLWRAIEGMEMALAPATLDRIRAVADRLV 462 >UniRef50_A4FI47 Transcriptional regulator, RpiR family n=2 Tax=Pseudonocardineae RepID=A4FI47_SACEN Length = 303 Score = 96.6 bits (239), Expect = 9e-19, Method: Composition-based stats. Identities = 62/277 (22%), Positives = 109/277 (39%), Gaps = 11/277 (3%) Query: 7 IRQRYQG--LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 +R R L + + LL QP A + S+ + A AGV+ ++V + AQ LG+ G+ Sbjct: 26 LRDRVPERGLRPKGAAVLEVLLTQPRRASYASAAEAAELAGVNVATVSRTAQALGFTGWV 85 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 L+ L S +P V ++ +G ++ + +M + + Sbjct: 86 DLQQELRARYLSSLSAPEVAAAHR-----TEGELGAASLRRDLESMAVLSRRLDDGLVRT 140 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 + +ARR ++ G+ V + G+ A+ VRD L +V P D+L+ Sbjct: 141 IAEAIAAARRTLIVANGSYVAVGSALGHNVGLAGYQASVVRDDADLANSVSRLEPGDVLV 200 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 AIS+ + + AA+E G +V +T AL + A + AE A + Sbjct: 201 AISFWRLYQSTVTAAEEASSRGARVFVLTDAASPALVEAAEQVVLIPAE----GVAFFPS 256 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + L D E I +EA + Sbjct: 257 LAPGMAVAQAIVAHLSTVDPERTRRSIEAAEAQWARF 293 >UniRef50_A0AGT3 Complete genome n=1 Tax=Listeria welshimeri serovar 6b str. SLCC5334 RepID=A0AGT3_LISW6 Length = 213 Score = 96.6 bits (239), Expect = 9e-19, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 73/218 (33%), Gaps = 10/218 (4%) Query: 55 AQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATL 114 +K GY+GF A K L + + + + + I +N + TL Sbjct: 1 MKKKGYEGFTAFKHHLKDEQNTTIN---------FSNVEKIDTEIKSSILKNEQEVIRTL 51 Query: 115 NVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATV 174 N+ + + + + + S+ RII+ S +A+ K D + + Sbjct: 52 NMINTGVIEDAIQKIESSERIIIFARAFSEFIAEEMKIKFQLANKYCELHTDPNIIKIMS 111 Query: 175 QASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY-TIAE 233 Q D ++ +S G EL AA + IT + L + L +E Sbjct: 112 QHLKKTDTVIFVSLNGETEELIDAAKNCYNKEIGTITITTNKESPLSMLSELVLVGFKSE 171 Query: 234 EQATNSASISACHAQGMLTDLLFIALIQQDLELAPERI 271 + + ++ +L + + + + + Sbjct: 172 ISFFPDYEVRSRLPLSVIARILLDSYVIRMNKHHENKK 209 >UniRef50_C1PCJ9 Glucosamine/fructose-6-phosphate aminotransferase, isomerizing n=1 Tax=Bacillus coagulans 36D1 RepID=C1PCJ9_BACCO Length = 611 Score = 96.6 bits (239), Expect = 9e-19, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 71/220 (32%), Gaps = 10/220 (4%) Query: 70 LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLN--------VNSEEK 121 LS ++ +++ D + ++++++ A+ TL V E Sbjct: 225 LSGEKILPEKTSVRWNQDELNLQDYGHYMLKEIMEQ-PEAIKRTLKDRLTESGVVIPEVD 283 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L RI + G S L + Sbjct: 284 DFFARRKLTDPERITIVASGTSHHAGMIGKKILETMLDIPVEAAIASEFRCEHGRLDEKT 343 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++AIS +G + A E + G V+AI+ + + L +++ +YT A A+ Sbjct: 344 LVIAISQSGETADTISALKEAKKSGAAVIAISNYRKSTLARKSDCVIYTHA-GPELAVAA 402 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 A Q LL I L ++ +I + L Sbjct: 403 TKAYTTQITALVLLSIVLAKKLHGSGEGQIPALLDALHSL 442 Score = 43.4 bits (101), Expect = 0.008, Method: Composition-based stats. Identities = 21/137 (15%), Positives = 43/137 (31%), Gaps = 7/137 (5%) Query: 97 LVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMK 156 L + + T + + + + L G G ++A A KL + Sbjct: 437 DALHSLADDVEKCLVMTQDAID-----QFAQVTNDQEHLFLIGRGLDYVLALEGALKLQE 491 Query: 157 IG-FNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRE-LNLAADEMLRVGGKVLAITG 214 + +A A T+ +P ++A++ R+ E+ V+ IT Sbjct: 492 VAYLHADAYAAGEMKHGTMALITPGVPVIALATQEHLRDKAINNIKEVKARDAYVVGITT 551 Query: 215 FTPNALQQRASHCLYTI 231 + + LY Sbjct: 552 TGDDEVSAVVDEVLYIP 568 >UniRef50_D1C5T9 Glutamine--fructose-6-phosphate transaminase (Isomerizing) n=2 Tax=Bacteria RepID=D1C5T9_SPHTD Length = 350 Score = 96.6 bits (239), Expect = 9e-19, Method: Composition-based stats. Identities = 31/143 (21%), Positives = 50/143 (34%), Gaps = 4/143 (2%) Query: 120 EKLHECVTMLRSARRI--ILTGIGASGLVAQNFAWKL-MKIGFNAAAVRDMHALLATVQA 176 E+ +R A ++ G+SG A + L M+ GF L Sbjct: 27 EQAEAIAEAIRDAEPNLIVIVARGSSGNAAVYAKYLLGMRNGFPVTLAAPSMFTLYQQPP 86 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 +++ IS +G ++ + + G +AIT + L A +CL A Sbjct: 87 RLGRAVVIGISQSGQSADIVAVEEAARQQGALTVAITNHPESPLATAADYCLPLHA-GPE 145 Query: 237 TNSASISACHAQGMLTDLLFIAL 259 A+ Q M LL AL Sbjct: 146 YAVAATKTYTNQLMALALLSTAL 168 >UniRef50_A3VAL1 Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VAL1_9RHOB Length = 320 Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 61/179 (34%), Gaps = 2/179 (1%) Query: 88 QIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVA 147 + ++ AA+ + + +L ++++ G+G SG + Sbjct: 1 MENMPTTVIDTARDVLLSEAAALTTLADSLPADFEAAAQLILDRNGKVVVGGVGKSGHIG 60 Query: 148 QNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGG 207 + A L G A + A + D L IS +G EL + + R Sbjct: 61 RKIAATLSSTGSPAFFIHPTEAAHGDLGMIEEHDTALLISNSGETSELLVMIEFCQRFDI 120 Query: 208 KVLAITGFTPNA--LQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDL 264 ++ I+ + L + L + E A +++ L D L +L+Q+ Sbjct: 121 PIIGISSVPGSTLMLASQCQLLLPKVPEACPIRLAPMTSTTMTLALGDALAASLMQKRG 179 >UniRef50_Q8KG38 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=46 Tax=Bacteria RepID=GLMS_CHLTE Length = 614 Score = 96.2 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 37/262 (14%), Positives = 82/262 (31%), Gaps = 25/262 (9%) Query: 25 LLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVP 84 ++ + +LS ++A S + + + + Sbjct: 202 IVEHTNKVVYLSDGEMAVVTRDSYTVKT-----------------IENVEQQKRVTELDF 244 Query: 85 IHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK-------LHECVTMLRSARRIIL 137 +I + +++ ++ E+ +H+ + L+ A+RI++ Sbjct: 245 SLEKIEKGGFEHFMLKEIFEQPEVMRDVMRGRVRVEEGRVHLGGIHDYLDRLKQAKRIMI 304 Query: 138 TGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNL 197 G S + + + V S DD+++ IS +G + Sbjct: 305 CACGTSWHAGLIGEYLIEEFARIPVEVDYASEFRYRNPIVSSDDVVIVISQSGETADTLA 364 Query: 198 AADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFI 257 A G V+ I + + + +YT A AS A AQ ++ +L + Sbjct: 365 ALRLAKEKGAMVMGICNVVGSTIPRETLCGMYTHA-GPEVGVASTKAFTAQVIVLFMLAM 423 Query: 258 ALIQQDLELAPERIRHSEALVK 279 AL + E + L + Sbjct: 424 ALSKGRTISQEEIKLNLRELAE 445 Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 49/149 (32%), Gaps = 12/149 (8%) Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG-FNAAAVRDMHALLATVQASS 178 + + E L+ AR + G G + VA A KL +I +A + Sbjct: 458 DAIKEIAVKLKDARNALYLGRGYNFPVALEGALKLKEISYIHAEGYPAAEMKHGPIALID 517 Query: 179 PDDLLLAISYTGVR-RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 D ++ I+ ++ +E+ G+V+AI +++ +Y Sbjct: 518 EDMPVIVIATRDNTYAKILSNIEEVRSRKGRVIAIASEGDREIERLTEDVIYIP------ 571 Query: 238 NSASISACHAQGMLT--DLLFIALIQQDL 264 + +A + LL + Sbjct: 572 --QASAAVLPLLTVIPLQLLSYHVATLRG 598 >UniRef50_Q7UL04 Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica RepID=Q7UL04_RHOBA Length = 419 Score = 96.2 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 74/199 (37%), Gaps = 4/199 (2%) Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 K A+ SVP + D +R + + + A+ + S + Sbjct: 41 KDAIVAPQPQLNHGTSVPTLTPLSPLDQIR-LVRETMLREAEAIQKAAAIASADAAEAAA 99 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 + R I+LTG+G +GL+AQ L G A + + A+ + DL++A Sbjct: 100 WISRCEGSIVLTGVGKAGLIAQKLVATLASTGSPAHFLHPIEAVHGDLGRVQSKDLVIAF 159 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT--IAEEQATNSASISA 244 S +G E+ + + ++A+T N L + A H + E A S+ Sbjct: 160 SNSGRSEEVVRVVEYLKHQACGIIAVTADRENPLAELADHVVPIGRHREACPDGLAPTSS 219 Query: 245 CHAQGMLTDLLFIALIQQD 263 + D + + L + Sbjct: 220 TSVMLAVGDAIAV-LASRL 237 >UniRef50_A6M2T4 Transcriptional regulator, RpiR family n=3 Tax=Clostridiales RepID=A6M2T4_CLOB8 Length = 265 Score = 96.2 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 41/268 (15%), Positives = 109/268 (40%), Gaps = 32/268 (11%) Query: 1 MNG-LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M + +I Y L+++++++ Y+L D+ + +A S ++++K ++KLG Sbjct: 25 MKFDIYKIADNY-KLSETERQVLQYILTNIDSVLTKGVRDVATINYTSAATIIKLSKKLG 83 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 Y G+ + L+ + + + +E+T+ + + ++ Sbjct: 84 YTGYVDMIYRLNFIVKNHQNN-----------------------QEHTSDITSFISEIEN 120 Query: 120 EKLHECVTMLRSARRIILT--GIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 +K+ + ++M+ R I+ G S +A F K++ +GF ++ + Sbjct: 121 KKIEDFISMIIKHREDIIFITATGFSDSIADFFWRKMLVLGFKC--IKTNSYGVYDSNQI 178 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL-YTIAEEQA 236 L++ IS +G + D + ++ TG + N + ++A+ +E Sbjct: 179 G-GALVIGISKSGETESITKVIDYASKNELDIITFTGKSENHMAKKATLNFMILDDKELD 237 Query: 237 TNSASISACHA-QGMLTDLLFIALIQQD 263 + + + +A ++ + L ++ Sbjct: 238 DRNLTANYFYARVMIVMEYLLDKVMSNL 265 >UniRef50_C9AA73 Predicted protein n=1 Tax=Enterococcus casseliflavus EC20 RepID=C9AA73_ENTCA Length = 271 Score = 96.2 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 43/268 (16%), Positives = 93/268 (34%), Gaps = 16/268 (5%) Query: 2 NGLLRIRQRYQGLAQSDK-----KLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQ 56 N L + L +++ LA+Y L L+ Q+A++ VS+SS+ +F + Sbjct: 12 NRLSLLNSLCNILNENEVGNPSVILAEYFLKNYHYLSELNIYQVADDCFVSRSSIRRFCK 71 Query: 57 KLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNV 116 +GY F K + E + R L A++ Sbjct: 72 SIGYNNFAEFKNEIREYDDQYSNLTAHFRQQDFREI---------LTNNVLEAIHEMSRS 122 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA 176 S E++H + +R ++ + F + ++ G V +++ ++ Sbjct: 123 ISREQIHLIARRIHKSRNTLILTSNYAVSAINTFQYGMVLQGKVIRLVSELYETNNLLKE 182 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 + DD ++ IS G+ + + + T + + E+ + Sbjct: 183 VTADDYVIVISGHGILAGVIE--EFLKTTTAYTELFTVNRSRSFDLLYDSICWLSEEDGS 240 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDL 264 S SI + L DL++ +++ Sbjct: 241 HESRSIYMVYGMQYLLDLVYANYVREYG 268 >UniRef50_C8WES2 KpsF/GutQ family protein n=3 Tax=Zymomonas mobilis RepID=C8WES2_ZYMMN Length = 336 Score = 95.8 bits (237), Expect = 1e-18, Method: Composition-based stats. Identities = 39/167 (23%), Positives = 66/167 (39%), Gaps = 2/167 (1%) Query: 100 EKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF 159 +I AM+ + +L + RII++GIG SG V + A L G Sbjct: 27 RNVILSEATAMHHLAASIGVDFAKAVSMLLETRGRIIVSGIGKSGHVGRKIAATLASTGS 86 Query: 160 NAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNA 219 +A + A + D+L+AIS++G REL + V+ IT + Sbjct: 87 SAFFIHPAEAAHGDLGMMMNGDILIAISFSGRTRELLPMISYAQTLQVPVIVITSQKGDV 146 Query: 220 LQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDL 264 L + A+ L E N A ++ L D L +++++ Sbjct: 147 LPKEATLSLRLPELKEACPANIAPTTSTTLTMALGDALAVSMMRHRG 193 >UniRef50_D1JGX9 Glucosamine--fructose-6-phosphateaminotransferase n=1 Tax=uncultured archaeon RepID=D1JGX9_9ARCH Length = 610 Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 68/198 (34%), Gaps = 6/198 (3%) Query: 90 RGDDPLRLVGEKLIKENTAAMYATL-NVNSEEKLHECVTMLRSARRIILTGIGASGLVAQ 148 K I+E A+ TL +E +++ + A I+L G S A Sbjct: 255 AEKGGYEHFMLKEIQEEPKAIRDTLMGYLTEGQINLGRDFIVDAESILLVACGTSYYAAL 314 Query: 149 NFAWKLMKIGFNAAAVRDMHALLATVQASS-PDDLLLAISYTGVRRELNLAADEMLRVGG 207 + + + + + + +AI+ +G + A + G Sbjct: 315 CGKYIIENLAKIPVRIELASEFNYSDFVLDGSKVVAMAITQSGETADTLTALKKAKGYGC 374 Query: 208 KVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQ---DL 264 K +AIT ++ + A +Y+ A A+ + Q ++ LL + L + Sbjct: 375 KTVAITNVLGSSATRLADETIYSRA-GPEIGVAATKSFITQLIIFYLLGLFLSKMPASVF 433 Query: 265 ELAPERIRHSEALVKKLV 282 ++ + ++++ Sbjct: 434 AEHLNELKRMPQIAQRVL 451 Score = 50.3 bits (119), Expect = 6e-05, Method: Composition-based stats. Identities = 23/172 (13%), Positives = 49/172 (28%), Gaps = 8/172 (4%) Query: 95 LRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKL 154 V + + E V E + + L G G + ++ A KL Sbjct: 429 PASVFAEHLNELKRMPQIAQRVLDEVNIQKHARYLSKYENTFFVGRGVNLPISLEGALKL 488 Query: 155 MKIG-FNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRE-LNLAADEMLRVGGKVLAI 212 +I +A + D ++AI E E+ G V+AI Sbjct: 489 KEISYIHAEGYAAGELKHGPFALLTEDTPVIAILTRDDVYEKTLGNVKEIKARGSPVIAI 548 Query: 213 TGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDL 264 +++ + ++++ + + LL ++ Sbjct: 549 AEEGDYEVEKYVDDVIRVP------RTSAVFSPIPNTVALHLLAYWTAKERG 594 >UniRef50_C2D7F4 Glutamine--fructose-6-phosphate transaminase (Isomerizing) n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D7F4_9ACTN Length = 615 Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 66/203 (32%), Gaps = 14/203 (6%) Query: 93 DPLRLVGEKLIKENTAAMYATL------NVNSEEKLHECVTMLRSARRIILTGIGASGLV 146 K I E A+ L + ++L L S RI + G S V Sbjct: 253 GGYADFMAKEIAEQPEALERLLKGRLTPDGIKLDELAMTSDELASVDRIYMIACGTSYHV 312 Query: 147 AQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVG 206 + + + + L + I+ +G + AA M +G Sbjct: 313 SLIARQYIESWAKIPVCCEFASEFIYKEPLITDHTLCIIITQSGETADTLCAARRMKALG 372 Query: 207 GKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDL-- 264 KV+AIT ++ + A +Y A AS A AQ + L+ + L Sbjct: 373 CKVIAITNVLGSSAAREADGVVYVQA-GPEICVASTKAYTAQIVACALVALQLAYVRKTL 431 Query: 265 -----ELAPERIRHSEALVKKLV 282 + E + L+++++ Sbjct: 432 EYSDVQSHFEHLLALSDLIREVI 454 >UniRef50_A3ERU9 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=2 Tax=Leptospirillum sp. Group II RepID=A3ERU9_9BACT Length = 615 Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 29/215 (13%), Positives = 59/215 (27%), Gaps = 11/215 (5%) Query: 70 LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTML 129 L H + + ++L+ S L Sbjct: 235 LVSRSHQGGHGKGEYPHYMFKEIGEQPEMLDRLLSSRIRTE---RGRLSVRFSPAAERAL 291 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP-DDLLLAISY 188 A+RI + G G S +++ + V P DLL+ ++ Sbjct: 292 LGAKRIRIVGCGTSFHAGLLGKYRIESLAGIPVEVDVASEFRYREPILDPATDLLVLLTQ 351 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 +G + A G L++ + + A ++ A A+ +Q Sbjct: 352 SGETADTLAALRMAREAGVPTLSLVNVEGSTADREADAAIFLEA-GPEFGVAATKTFLSQ 410 Query: 249 GMLTDLLF------IALIQQDLELAPERIRHSEAL 277 L L+ + L +++ E + L Sbjct: 411 ITLLTLIALFLAPEVRLAEKEGRSRDEILSDFLKL 445 >UniRef50_C5A3S6 Glucosamine--fructose-6-phosphate aminotransferase, sugar isomerase (SIS) domain (GlmS) n=1 Tax=Thermococcus gammatolerans EJ3 RepID=C5A3S6_THEGJ Length = 338 Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 26/180 (14%), Positives = 66/180 (36%), Gaps = 6/180 (3%) Query: 105 ENTAAMYATLNVNSEE-KLHECVTMLRSA-RRIILTGIGASGLVAQNFAWKLMKIGFNAA 162 ++ T K+ + RR+I G G+S + L+K + Sbjct: 6 NMIRSIRETPQALDSALKILKEWDPPEKGFRRVIFIGCGSSYFSSLAGNHVLLKSSIESH 65 Query: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222 A +L + + L++A S +G E+ A G ++ +T + +++ Sbjct: 66 AFPASEFMLHY-RELAKGALVVASSRSGKTGEVIEAVKVAREKGATIIGVTCNENSKIEE 124 Query: 223 RASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 + + E+ N + + A ++ + + L+ + E + + V++++ Sbjct: 125 VSDETIAIPNGEEP-NIPATKSFSAITLVLQGIALKLLGR--EEGLNELMAIQQAVERVL 181 >UniRef50_Q03Y13 Sugar phosphate isomerase with CBS domains n=6 Tax=Lactobacillales RepID=Q03Y13_LEUMM Length = 320 Score = 95.0 bits (235), Expect = 2e-18, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 65/166 (39%), Gaps = 5/166 (3%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG 158 +K A+ + + +L + R+I GIG SG++A A +G Sbjct: 10 AKKTFDVEIEALTRVKSSLGKSFDEAVDKILSTKGRVIFIGIGKSGIIADKIAASFSSVG 69 Query: 159 FNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNL---AADEMLRVGGKVLAITGF 215 + + A + S DD+++ IS +G +E+ A + +A+TG Sbjct: 70 LASFYIDAGTAYHGDLGRVSSDDVVIFISNSGETQEVLQALSALQNIHNNELATIAMTGS 129 Query: 216 TPNALQQRASHCLYTIAEEQAT--NSASISACHAQGMLTDLLFIAL 259 + L + L E+A A S+ A ++ D L +A+ Sbjct: 130 EDSTLAKNTDIVLSIDVAEEADITKLAPTSSTTATLVMGDALLVAI 175 >UniRef50_UPI00016AAD50 transcriptional regulator, RpiR family protein n=4 Tax=Burkholderia pseudomallei RepID=UPI00016AAD50 Length = 216 Score = 95.0 bits (235), Expect = 2e-18, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 69/188 (36%), Gaps = 7/188 (3%) Query: 97 LVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMK 156 + + ++ A + T + V L +ARRI + G+GAS +A L Sbjct: 12 ELIDASFEQALANLERTRGRLDRANVEAAVDSLLAARRIFIVGMGASAFLAGLMEHGLSV 71 Query: 157 IGFNAA---AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 N + + ++ DDL++AI++ + G VLAIT Sbjct: 72 YRDNVQSLALLGGPTDAARRLFSARGDDLVVAIAFPRYVHDTIELTRRAAERGAPVLAIT 131 Query: 214 GFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRH 273 + + A+ L+ AE + ++ A L + L A+ + A Sbjct: 132 DGPDSPIAPFAARALFVHAE----RRLAATSEAAVLALVEALIDAVAHRSQRSARAAAEV 187 Query: 274 SEALVKKL 281 +E ++ L Sbjct: 188 TEFMLPWL 195 >UniRef50_C7LLH6 SIS domain protein n=3 Tax=Mycoplasma mycoides group RepID=C7LLH6_MYCML Length = 271 Score = 95.0 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 36/249 (14%), Positives = 87/249 (34%), Gaps = 18/249 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + +I+Q L+ + K+ DY+L + S + + + V S + K KL Sbjct: 1 MNIIEKIKQNKINLSPQELKVCDYILTNISDYHNFSVKSICKKLNVQPSVITKTLVKLEI 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G L L + + + ++ ++ Sbjct: 61 GGLKQLISYL----------ENNSNFFKDETKVSFDNIIDEFENRLEDSLKQLKTNLDIN 110 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L E V + S+++IIL G + ++A ++L+++ + + L + + Sbjct: 111 YLKEVVCKILSSKKIILFCTGKTKILANFLFFQLLELNLSVELFSN---LFDSRAYNVEQ 167 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ---RASHCLYTIAEEQAT 237 ++ IS +G ++N + + + + G T + + + + ++ Sbjct: 168 ACIIVISTSGNNSKINRYLNFISKRKPNTI--IGITSSPILKTDIEVDYHIHGSENNFFI 225 Query: 238 NSASISACH 246 N + Sbjct: 226 NDNRSNPMI 234 >UniRef50_Q7MCJ0 Transcriptional regulator n=4 Tax=Vibrionaceae RepID=Q7MCJ0_VIBVY Length = 215 Score = 95.0 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 86/245 (35%), Gaps = 40/245 (16%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 ++ + +YL+ +S++ +AN+A + +SV + +K+GY + L+ L Sbjct: 1 MNTFRGIERVIYEYLIGHASQLHEISAKTIANKALTTTTSVNRVCKKMGYASYTELRYKL 60 Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 + L Q ++ + + + L Sbjct: 61 ANELKKQAQNQEG-------------------------------EECEQSVISQVAKTLS 89 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 + + L GAS + + L + D+H L LL IS +G Sbjct: 90 GSPVVYLYSRGASIVSVNYLSRFLSLANVPHLVITDIHQLTRAELGM-----LLLISKSG 144 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGM 250 + + A R G KV+ I+ + L Q + + E+ + S+ + +Q Sbjct: 145 ETQAVVEMAHNAKRKGLKVMGISRK-GSTLAQSSHLNIPL---EEQVDGISLYSRESQIH 200 Query: 251 LTDLL 255 + +++ Sbjct: 201 ILNIV 205 >UniRef50_B0N144 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0N144_9FIRM Length = 260 Score = 95.0 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 84/221 (38%), Gaps = 21/221 (9%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + R +A Y+L D + +++++LA+ VS+SS+ +F +K+GY+ Sbjct: 10 NVINRESSNSMNF-----IIAQYILENLDRRKVITTKELADNCNVSKSSISRFCRKIGYE 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDD--PLRLVGEKLIKENTAAMYATLNVNSE 119 F L+ A++ + + I + D + + + + Sbjct: 65 DFMELQYAIA--------TYNSFIAERFSHIDGVTTKDYVVNYFERSKEIINYLNQNMDT 116 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L E V + +R++L G S A + + L + + +D + ++ Sbjct: 117 DTLEELVKDIHDYKRVVLMGHVQSSFPAISLQYYLTILHKFIYSTQDPNEQREMLETLDD 176 Query: 180 DDLLLAISYTGVRRELNLAADEM----LRVGGKVLAITGFT 216 +L++ S G E D + G K+ IT Sbjct: 177 QNLIIIFSAGGRFLE--RVLDRLSVMDRENGPKIYMITANK 215 >UniRef50_C2JQK2 Phosphosugar-binding transcriptional regulator n=10 Tax=Enterococcus RepID=C2JQK2_ENTFA Length = 251 Score = 94.6 bits (234), Expect = 3e-18, Method: Composition-based stats. Identities = 42/232 (18%), Positives = 78/232 (33%), Gaps = 37/232 (15%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + I + L S+ + ++ D + L +++A + VS ++++ A+K+GY Sbjct: 22 MDTEMLIDKY--QLNDSEAAVLRFMDKNRDCLKSLGIREVAKASYVSTTAIINMAKKIGY 79 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ L A E E L+ Sbjct: 80 SGYSELVFAY-------------------GNKHSSISFPENFSNEEKDEFIRLLSR---- 116 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +RI++ G G S +A +F+ L GF A A + L D Sbjct: 117 ---------YREKRIMVLGSGFSQNIANHFSEMLNLYGFRATANSHLEFLRE---NVEKD 164 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA 232 L+ +S +G L ++A G + + Q A+ + T Sbjct: 165 VLIFIVSNSGDTLRLAELVKLAKNHHIDLIAFVGEKKSKIGQLATLTISTET 216 >UniRef50_Q96XH0 581aa long hypothetical glucosamine--fructose-6-phosphate aminotransferase n=1 Tax=Sulfolobus tokodaii RepID=Q96XH0_SULTO Length = 581 Score = 94.6 bits (234), Expect = 3e-18, Method: Composition-based stats. Identities = 25/216 (11%), Positives = 76/216 (35%), Gaps = 4/216 (1%) Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 K+ ++ + + +++ + + + ++ E+ L Sbjct: 212 FKIFNTQGEVNGELKRVKYKEEIADKGGFSHFMLKEIYDIPLSLINSVNSLM-EKYLSLA 270 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 ++ +AR++ + G+S ++ L + N V + + +++A Sbjct: 271 SMIIANARKVYIIANGSSLHAGYISSYYLHDVSLNV--VSAAEFPYYALDNITTGTVVIA 328 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 IS +G ++ + + G +L IT + L ++ L + Sbjct: 329 ISQSGETSDVIRSVKLAKQRGAVILGITNSVGSRLALESNVYLPI-TAGPELAVPATKTF 387 Query: 246 HAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + ++ +L + Q ++ + I H + +++L Sbjct: 388 TSTIIVLKILSDYVSYQLGKIDKKDIDHDKNEIQRL 423 >UniRef50_A9KTD7 Glucosamine--fructose-6-phosphate aminotransferase, isomerizing n=14 Tax=Clostridiales RepID=A9KTD7_CLOPH Length = 614 Score = 94.6 bits (234), Expect = 3e-18, Method: Composition-based stats. Identities = 32/217 (14%), Positives = 66/217 (30%), Gaps = 18/217 (8%) Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 K + + + QPE+ + I +I+ E L+ T + + + Sbjct: 245 FKHYMLKEIYEQPEAITRTIAPRIKKYTGEDSKKEYLL------PDLTCDNIPDSLFSDI 298 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 ++ +T G + L ++ V + L++ Sbjct: 299 NRII-------ITACGTAMHAGLMGKVLLERLLRIPVTVDIASEFRYQDPIMDRNTLVIT 351 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 +S +G + A +G K L+I +A+ + + + YT A AS A Sbjct: 352 VSQSGETADTLAALRLAHEMGAKTLSIVNVKGSAIARESDYVFYTHA-GPEIAVASTKAY 410 Query: 246 HAQGMLTDLLFIALIQQDL----ELAPERIRHSEALV 278 AQ +L ++ +V Sbjct: 411 TAQLSAFYILAFRFAYAKGCLAKNEVSNYLQKLYDVV 447 >UniRef50_B5JQT0 Sugar isomerase, KpsF/GutQ family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQT0_9BACT Length = 326 Score = 94.3 bits (233), Expect = 4e-18, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 67/169 (39%), Gaps = 5/169 (2%) Query: 100 EKLIKENTAAMYATLNVNSE---EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMK 156 ++ + AA++AT + + + L ++IL+G+G + + Q L Sbjct: 11 QRCLDIEIAALHATRDSLDARFAQVVSLLHQTLARGNKLILSGVGKNAHICQKLVGTLNS 70 Query: 157 IGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT 216 G + + + AL + D ++A S +G EL + R + +A+T Sbjct: 71 TGAPSTFLDPVQALHGDLGLCRQRDTVVAFSNSGETAELLRFLPMVQRFDVQTIAVTAKP 130 Query: 217 PNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQD 263 ++L + L E + A ++ A + D + + L++ + Sbjct: 131 DSSLAKMCDATLLYAIEREACPLELAPTASTTASLAIGDAVAMVLLELN 179 >UniRef50_D2RHI3 6-phospho 3-hexuloisomerase n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RHI3_ARCPR Length = 212 Score = 94.3 bits (233), Expect = 4e-18, Method: Composition-based stats. Identities = 39/192 (20%), Positives = 80/192 (41%), Gaps = 15/192 (7%) Query: 97 LVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMK 156 + + + + + +K+ E ++ L +AR I + G G SG VA+ FA +LM Sbjct: 27 ETLIRFLDKVCEHVQNIKSNLDFKKIEEFISALENARCIFVMGAGRSGFVAKAFAMRLMH 86 Query: 157 IGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLR-VGGKVLAITGF 215 +G+N V + P+DLL+AIS +G + + +G K++AIT Sbjct: 87 LGYNVYVVGET-----VTPRIKPEDLLIAISGSGETLSVVNISRRAKEDIGSKLVAITQR 141 Query: 216 TPNALQQRASHCLYTIAEEQATNSASISACHA--------QGMLTDLLFIALIQQDLELA 267 + L + + + +++ + +S + D L ++ +L Sbjct: 142 PESTLAKMSDIVIVLKGKDKYERNHELSKLAPLGTLFELTALIFLDGLVAEIMN-LKQLT 200 Query: 268 PERIRHSEALVK 279 E + A+++ Sbjct: 201 EEDLAERHAVLE 212 >UniRef50_A9B0V2 Glutamine--fructose-6-phosphate transaminase (Isomerizing) n=3 Tax=Bacteria RepID=A9B0V2_HERA2 Length = 348 Score = 94.3 bits (233), Expect = 4e-18, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 56/181 (30%), Gaps = 14/181 (7%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKI- 157 +L++ A + E + + V + G S A+ + L + Sbjct: 18 LARLLEAEKATVAKLAAAIRERNISQIV----------IAARGTSDNAARYAQYLLGSLN 67 Query: 158 GFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTP 217 G + + +L IS +G ++ E + G AIT T Sbjct: 68 GILVTLATPSLFSIYQRPPVLGNVCVLGISQSGKSPDIVAVLTEARKQGALTAAITNKTD 127 Query: 218 NALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + L Q + A E A+ + AQ LL AL D + + + Sbjct: 128 SPLAQAGDFVIDLHAGE-ELAVAATKSYTAQLAAIALLSTALA--DDSAMNQALERLPRV 184 Query: 278 V 278 V Sbjct: 185 V 185 >UniRef50_C1ZGN7 KpsF/GutQ family protein n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZGN7_PLALI Length = 391 Score = 94.3 bits (233), Expect = 4e-18, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 67/185 (36%), Gaps = 5/185 (2%) Query: 88 QIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILT-GIGASGLV 146 I D LR G ++++ A+ V L + R ++ GIG +GL+ Sbjct: 23 MITPLDELRE-GREILRTEGQALLDLSRRLD-ASFCAAVEYLSNTRGAVIVTGIGKAGLI 80 Query: 147 AQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVG 206 Q L G A + AL + PDD++LA S +G EL G Sbjct: 81 GQKITATLCSTGSRAYFLHPTEALHGDLGCVGPDDVILAFSNSGETAELLALLPIFEARG 140 Query: 207 GKVLAITGFTPNALQQRASHCLYTI--AEEQATNSASISACHAQGMLTDLLFIALIQQDL 264 V+++T + L + + + E A ++ A + D L ++ Sbjct: 141 IPVVSVTASPVSTLGRASQVVVTMGRLHECGVQGLAPSTSTTAMLAIGDALAFVTCKRRS 200 Query: 265 ELAPE 269 A + Sbjct: 201 FSARD 205 >UniRef50_Q8TUU0 Predicted sugar phosphate isomerase n=1 Tax=Methanopyrus kandleri RepID=Q8TUU0_METKA Length = 180 Score = 94.3 bits (233), Expect = 4e-18, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 74/186 (39%), Gaps = 11/186 (5%) Query: 96 RLVGEKLIKENTAAMYATLNVNSEEKLHECVTM----LRSARRIILTGIGASGLVAQNFA 151 K+++ + N EE + + + + +R+ R I + G+G +GL+ + FA Sbjct: 1 MDRIRKIMRREAEVIEYACNNLPEEDVKKALDLVVEKIRNDRGIFIVGMGRTGLIGECFA 60 Query: 152 WKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLA 211 +L+++G V +A PDDLL+A+S +G +N AAD G VLA Sbjct: 61 VRLVQMGARCYVVGHSTE-----RAIKPDDLLIALSVSGNTAFVNYAADVAKDEGADVLA 115 Query: 212 ITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERI 271 +T + + ++A + E+ + D L ++ + Sbjct: 116 VTMNADSKIAEKADVVVVLPEPEEII--LRTFSEMLMLSFLDGFTAQLAKELGVDESDMW 173 Query: 272 RHSEAL 277 + Sbjct: 174 ERHAKI 179 >UniRef50_C6XG05 Polysialic acid capsule expression protein n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XG05_LIBAP Length = 341 Score = 94.3 bits (233), Expect = 4e-18, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 58/149 (38%), Gaps = 2/149 (1%) Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA 176 S + + R+++TGIG SG + A L G + V A + Sbjct: 49 LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ- 235 + DDL++ +S++G EL R ++AIT + + A L E + Sbjct: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168 Query: 236 -ATNSASISACHAQGMLTDLLFIALIQQD 263 A ++ Q + D L IAL++ Sbjct: 169 CPHGLAPTTSAIMQLAIGDALAIALLESR 197 >UniRef50_Q0RXZ1 Possible transcriptional regulator n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0RXZ1_RHOSR Length = 282 Score = 93.9 bits (232), Expect = 5e-18, Method: Composition-based stats. Identities = 56/263 (21%), Positives = 104/263 (39%), Gaps = 9/263 (3%) Query: 20 KLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPE 79 ++ D + QP A + S+ +A A V+ ++VV+ AQ LG++G+ AL+ + + Sbjct: 23 EVLDLIAKQPRMASYASASAVAETARVNTATVVRAAQALGFEGWLALRAEVRSRYLASLS 82 Query: 80 SPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTG 139 + V + RG P ++ A + + + T + A R + Sbjct: 83 ATEVSAEHAERGVHPASSAVR----QDVANVGLFARSLDLDVIEHFATAISQASRTAVVT 138 Query: 140 IGASGLVAQNFAWKLMKIGFN-AAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLA 198 G+ VA A +G+ A +R L + + +P+ +AIS+ + E+ A Sbjct: 139 TGSYAAVAAPLAHLGAVMGYPIAMEIRGGTHLANVMSSMTPESCFVAISFWRLHAEILKA 198 Query: 199 ADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIA 258 A R G V IT L + A H + +E + + A + + + Sbjct: 199 ARSAARRGATVCVITDSVSTPLTEVADHVIVVSSEGGSW----FPSMTAGVCAVNAVLTS 254 Query: 259 LIQQDLELAPERIRHSEALVKKL 281 L QQ + + I E +L Sbjct: 255 LEQQGGQKVQDAIADMEHTWAEL 277 >UniRef50_Q6ET44 Os02g0158300 protein n=7 Tax=Magnoliophyta RepID=Q6ET44_ORYSJ Length = 344 Score = 93.9 bits (232), Expect = 6e-18, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 62/169 (36%), Gaps = 7/169 (4%) Query: 102 LIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILT-GIGASGLVAQNFAWKLMKIGF- 159 L + + + L A + G+G SG+VA+ A L +GF Sbjct: 27 LFGAQRRHLDHFFDRLDLSQAAAFAQALVDAPGAVFFTGVGKSGIVARKLAQTLASLGFT 86 Query: 160 NAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT--- 216 A + + AL + + P DLL+ +S +G EL A G ++++T Sbjct: 87 RAGFLSPVDALHGDIGSVFPGDLLVLLSKSGASDELLALAPCARAKGAHLISLTSAASGA 146 Query: 217 PNALQQRAS--HCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQD 263 L L AE A +++ Q + D + A+++ Sbjct: 147 DCPLAAVCDLNVHLPLQAEVCPFGLAPVTSTAIQMVFGDTVVAAIMEAR 195 >UniRef50_C3RJC2 Predicted protein n=2 Tax=Bacteria RepID=C3RJC2_9MOLU Length = 257 Score = 93.9 bits (232), Expect = 6e-18, Method: Composition-based stats. Identities = 37/250 (14%), Positives = 84/250 (33%), Gaps = 15/250 (6%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L + G S ++A Y+L + ++L +++A E V+ SS+ +F +++G + Sbjct: 10 FLSTLVSEKNGSTNS--QIAAYILNHLEEVQNLGIKEIAKECNVAVSSISRFCKEVGLRD 67 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK L S + + + ++ + + Sbjct: 68 FAELKELLLSTDLSFEDH---------SHATSKQARLHDYSHKVRESIIMVEKSIDMDAV 118 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + +++ + G+ +G VA N L+ + + + A+ DDL Sbjct: 119 IDLCKDINEYQKVAIFGLLKAGAVAFNLQGDLLMLNKQVYTNISYSQQIQYIVAADEDDL 178 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA----EEQATN 238 ++ SYTG + R+ + + + + + Sbjct: 179 IIIFSYTGAYFDYQDLRALKKRLTAPKIWMISSDDREYPECIDRTILFKSLQDQNSHPYQ 238 Query: 239 SASISACHAQ 248 I+ AQ Sbjct: 239 LQFIAGLIAQ 248 >UniRef50_Q9HT00 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=17 Tax=Halobacteriaceae RepID=GLMS_HALSA Length = 601 Score = 93.5 bits (231), Expect = 7e-18, Method: Composition-based stats. Identities = 34/260 (13%), Positives = 75/260 (28%), Gaps = 13/260 (5%) Query: 22 ADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESP 81 A + + +L + +A+ + +V G + + ++ Sbjct: 190 ATAFIEHTNRVTYLRNGDIAHLTET-EWTVY-------NDGARVSRDIEALDWSADAAGK 241 Query: 82 SVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIG 141 S H ++ + I + + T E L++ + + G Sbjct: 242 SGYDHYMLKEIHEQPRALRQAISGRISDLG-TDVTLDME---LSTETLQNVAELQIVACG 297 Query: 142 ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADE 201 S L V S D L++AI+ +G + A Sbjct: 298 TSYHAGLYAKELLETHADLPVTVHVASEYELRGGRSPEDTLVVAITQSGETADTLAALRS 357 Query: 202 MLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQ 261 + G LA+T + + + A L+ A A+ +Q LL + + + Sbjct: 358 AAQKGAPTLALTNTLGSTVTREADDALFIRA-GPEIGVAATKTFVSQVATAALLTMHIGR 416 Query: 262 QDLELAPERIRHSEALVKKL 281 ++ ++ L Sbjct: 417 ARNAISTGDAAALRDAIRDL 436 >UniRef50_A3DPP9 Glutamine--fructose-6-phosphate transaminase n=11 Tax=Thermoprotei RepID=A3DPP9_STAMF Length = 608 Score = 93.5 bits (231), Expect = 7e-18, Method: Composition-based stats. Identities = 27/194 (13%), Positives = 69/194 (35%), Gaps = 10/194 (5%) Query: 95 LRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKL 154 + +++ + + + T ++ E+ L ++ A+ + + G G S ++ Sbjct: 259 PHYMLKEIYEIPDSMIKTTYSLM-EKYLRLAAMIIYGAKNVYVIGNGTSLHAGMVSSYYF 317 Query: 155 MKI-GFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 + N V ++ S +++AIS +G ++ + + G ++ +T Sbjct: 318 TDLANINVNVVSAAEFPYYALKNVSTGTVIIAISQSGETSDVIKSVKLAKQYGAVIIGVT 377 Query: 214 GFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLF-------IALIQQDLEL 266 + L ++ L A + + + LL L Q + Sbjct: 378 NVVGSRLSLESNVYLPIGA-GPELAVPATKTFVSSLVALALLAGYTGLYTGKLSQTEYVG 436 Query: 267 APERIRHSEALVKK 280 E+IR + ++K Sbjct: 437 ITEKIRETAKELRK 450 >UniRef50_Q6MA93 Putative Gut Q protein n=2 Tax=Parachlamydiaceae RepID=Q6MA93_PARUW Length = 319 Score = 93.5 bits (231), Expect = 7e-18, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 70/169 (41%), Gaps = 3/169 (1%) Query: 98 VGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILT-GIGASGLVAQNFAWKLMK 156 + ++++ + + + V +L + I G+G SGLVA+ A ++ Sbjct: 1 MLKEILDKQHLYTNHYFETLDLIAIEKLVELLLETEKSIFFTGVGKSGLVAKKIALTMVS 60 Query: 157 IGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT 216 G A + A+ + S DD+ + +S +G EL + GG ++A+ Sbjct: 61 TGTKALYLSPTDAVHGDIGIVSQDDIFIMLSKSGESDELLNLVPPIRNKGGILVAVVCNP 120 Query: 217 PNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQD 263 + L + + +E+ + A + QG+ DL+ AL+++ Sbjct: 121 QSRLAAACHYVITLPFQEELCPFDMAPTMSTIFQGLFGDLVTAALMRRK 169 >UniRef50_Q8D2M7 YrbH protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=Q8D2M7_WIGBR Length = 327 Score = 93.5 bits (231), Expect = 8e-18, Method: Composition-based stats. Identities = 26/168 (15%), Positives = 64/168 (38%), Gaps = 4/168 (2%) Query: 100 EKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIG 158 ++++ + + + + +L +I GIG SG +A+ + G Sbjct: 17 KQVLDLEKNGICKLKKCINRD-FQKIGELLLKCNGKIATMGIGKSGHIARKLSSTFSSTG 75 Query: 159 FNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPN 218 + + A + + +D+++AIS +G +E+ + ++ITG + Sbjct: 76 SPSFFIHPTEAGHGDLGSLCSNDIVIAISNSGESKEIISLIYYLNNFNITYISITGNPLS 135 Query: 219 ALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDL 264 + + + L E + + ++ A ++ D L I+L Sbjct: 136 TMSKLSKINLSIKVTKEACSLGLSPTTSSTAALVMGDALAISLSIAKG 183 >UniRef50_UPI0001C30EDC glucosamine/fructose-6-phosphate aminotransferase, isomerizing n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C30EDC Length = 610 Score = 93.5 bits (231), Expect = 8e-18, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 52/190 (27%), Gaps = 3/190 (1%) Query: 77 QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH--ECVTMLRSARR 134 +P + I E A+ TL S L AR Sbjct: 235 RPRWLELEAARVRPSHAGHESFMLAEIGEQPQALRRTLRAQSAAHAIGEAPWETLAGARS 294 Query: 135 IILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRE 194 + G G S A + L G A V P D++L I+ +G + Sbjct: 295 VSFVGCGTSHHAALVGRYLLESWGGLRAEVDVASEWRHRDPDVGPGDVVLGITQSGETAD 354 Query: 195 LNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDL 254 A G VL +T + + + A + T A + A+ Q Sbjct: 355 TLGALRLARERGAHVLGLTNVPGSQITREADGTILTDA-GTEVSVAATKTFVTQIAALAG 413 Query: 255 LFIALIQQDL 264 L + Sbjct: 414 LALRTGVARG 423 >UniRef50_D1CIK3 Glutamine--fructose-6-phosphate transaminase (Isomerizing) n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CIK3_THET1 Length = 346 Score = 93.5 bits (231), Expect = 8e-18, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 59/182 (32%), Gaps = 10/182 (5%) Query: 100 EKLIKENTAAMYATLNVN---SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMK 156 ++E + L+ E++ + +++ G+S A + Sbjct: 4 NTFLEEEIYSQPKVLSSLLEWELERVEGITGEIPEFNYVVIAARGSSDHAATYAQYVWSS 63 Query: 157 I-GFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGF 215 + GF A L L++ +S +G ++ +E R G LAIT Sbjct: 64 LAGFPVALATPSLYTLYQTPPRLDGALVVGVSQSGQSPDIVAVLEEGRRQGRPTLAITNA 123 Query: 216 TPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 + L A + A + A+ AQ L +AL+ + + + Sbjct: 124 PDSPLANTADWVIPIHA-GPERSVAATKTYTAQL-----LVMALLGALWSGSRTHLEEVK 177 Query: 276 AL 277 + Sbjct: 178 QI 179 >UniRef50_Q8AAB1 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=82 Tax=Bacteria RepID=GLMS_BACTN Length = 614 Score = 93.5 bits (231), Expect = 8e-18, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 57/198 (28%), Gaps = 8/198 (4%) Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 K+ L + P + D + I + + + Sbjct: 240 KVELKLGQLEKGGYPHFMLKEIFEQPDCIHDCMRGRINVEANNVV-------LSAVIDYK 292 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 L +A+R I+ G S + V D+++AI Sbjct: 293 EKLLNAKRFIIVACGTSWHAGLIGKHLIESFCRIPVEVEYASEFRYRDPVIDEHDVVIAI 352 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S +G + A + G + I +++ + A+H I AS A Sbjct: 353 SQSGETADTLAAVELAKSRGAFIYGICNAIGSSIPR-ATHTGSYIHVGPEIGVASTKAFT 411 Query: 247 AQGMLTDLLFIALIQQDL 264 Q + +L + L ++ Sbjct: 412 GQVTVLTMLALTLAREKG 429 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 45/141 (31%), Gaps = 4/141 (2%) Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG-FNAAAVRDMHALLATVQASS 178 +KL E A I G G S VA A KL +I +A + Sbjct: 458 DKLAELSKTFTYAHNFIYLGRGYSYPVALEGALKLKEISYIHAEGYPAAEMKHGPIALID 517 Query: 179 PDDLLLAI-SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 + ++ I + G+ ++ E+ GKV+A + + A + E Sbjct: 518 AEMPVVVIATQNGLYEKVLSNIQEIKARKGKVIAFVTKGDTVISKIADCSIELP--ETIE 575 Query: 238 NSASISACHAQGMLTDLLFIA 258 + +L + + Sbjct: 576 CLDPLITTVPLQLLAYHIAVC 596 >UniRef50_A4EA48 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EA48_9ACTN Length = 187 Score = 93.1 bits (230), Expect = 9e-18, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 64/177 (36%), Gaps = 1/177 (0%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG 158 E++ + T + +L ++ +AR++ + + A F +L G Sbjct: 1 MERMEGLYQNTLAETQELLDPTQLDHATKLIANARQVDIYTGSHNLYPAGMFRDRLFSAG 60 Query: 159 FNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPN 218 +A ++ + T AS PD + +AISY+G+ L + V+ I Sbjct: 61 KSATCHDNIEPQVCTALASGPDHVAIAISYSGLAPNLKDILPILSSRHVPVIVIGTPHCA 120 Query: 219 ALQQRASHCLYTIAEEQA-TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 + + L E ++ A + D L+ + +D E + HS Sbjct: 121 RIHPGFAAYLTVSDHESMTHRITQFASHIAVQYVLDSLYSSYFAKDYARCSEFLEHS 177 >UniRef50_Q9ZD42 Uncharacterized protein RP505 n=16 Tax=cellular organisms RepID=Y505_RICPR Length = 319 Score = 93.1 bits (230), Expect = 9e-18, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 70/173 (40%), Gaps = 1/173 (0%) Query: 93 DPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAW 152 + R++ +++I T+A+ N + +L RIILTGIG SG +A+ A Sbjct: 5 NNYRIIAKRVISSATSALETLSNNIPSDFNRIIEFLLSFKGRIILTGIGKSGYIARKIAA 64 Query: 153 KLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAI 212 G + + A + + +DL++ +S +G +EL + K+ A+ Sbjct: 65 SFSSTGMPSFYLHPAEASHGDLGMITRNDLVMMLSNSGETKELFNIIEYCNNSSIKIAAM 124 Query: 213 TGFTPNALQQRASHCLYTIA-EEQATNSASISACHAQGMLTDLLFIALIQQDL 264 T + L +R+ L +E + + L D + + ++ Sbjct: 125 TMNKNSTLAKRSDFLLKIPECQEASLIGTPTISSLIMLSLGDAIMTVIHEERG 177 >UniRef50_A5UNH8 Glucosamine--fructose-6-phosphate aminotransferase, GlmS n=4 Tax=Methanobacteriaceae RepID=A5UNH8_METS3 Length = 593 Score = 93.1 bits (230), Expect = 9e-18, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 73/210 (34%), Gaps = 6/210 (2%) Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 + E ++ ++ + K I E A+ TL + + E + L Sbjct: 229 DNVIEKEIETIDWTPEMAEKEGYDYFMIKEINEQATAVRNTLTE--RDNIQEIIDDLGDI 286 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVR 192 RI G S + + L + V + + D L++ IS +G Sbjct: 287 SRICFVACGTSFHASITGKYLLESLAGIPTDVILASEFKYSANTLNEDTLVIFISQSGET 346 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLT 252 + A D K L + +A+ +RA + + T A A+ +Q Sbjct: 347 ADSLKALDLANET-SKTLGVVNVAGSAITRRADYVIQTQA-GPEIGVAATKTYVSQLTAI 404 Query: 253 DLLFIALIQQDLELAPERIRHSEALVKKLV 282 LF ALI +D E E I +++L+ Sbjct: 405 -YLFAALIAKD-EKLLEDIYKVPDFIEELL 432 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 24/174 (13%), Positives = 48/174 (27%), Gaps = 20/174 (11%) Query: 100 EKLIKENTAAMYATLNVNSE-EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG 158 EKL+++ + E + + + AR G G S +A A KL Sbjct: 415 EKLLEDIYKVPDFIEELLKEVDSIKTMSKKYKFARDFFFIGRGYSYPIALEGALKL---- 470 Query: 159 FNAAAVRDMHAL-----LATVQASSPDDLLLAISYTGVR-RELNLAADEMLRVGGKVLAI 212 + + ++ I G R+ +E+ G +LAI Sbjct: 471 KEITYIHGEGYAAGELKHGPLALIDEGIPVVVILPPGENHRKTMSNLEEVKSRGADILAI 530 Query: 213 TGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGML--TDLLFIALIQQDL 264 L+ ++ ++ + LL + + Sbjct: 531 GSKNDERLKLKSDDLFTIDSDVNEVI-------APLVYIVPLQLLAYYVAVEKG 577 >UniRef50_B1LR09 Sugar isomerase, KpsF/GutQ family n=21 Tax=Bacteria RepID=B1LR09_ECOSM Length = 198 Score = 93.1 bits (230), Expect = 9e-18, Method: Composition-based stats. Identities = 26/173 (15%), Positives = 67/173 (38%), Gaps = 2/173 (1%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWK 153 L + + ++ A+ ++ E + + +++ G+G SG++A+ A Sbjct: 5 DLIHLIKHFMRNEHKAVEEVIDSPLSEVANLIKVLQSCQGKVVFIGVGKSGIIARKLAAT 64 Query: 154 LMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 G + V A+ + + DD+++ IS +G E+ + ++G +++ T Sbjct: 65 FASTGTPSFFVHGTEAVHGDLGMVAKDDVVILISNSGETAEILATLPSLKKMGNYLISFT 124 Query: 214 GFTPNALQQRASHC--LYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDL 264 ++L + +E A + ++ D + +AL + Sbjct: 125 RSHHSSLAISCDLSVEIPVKSEADNLGLAPSCSSTVVLVVGDAVALALSELKK 177 >UniRef50_A4THA2 Phosphosugar isomerase/binding protein n=30 Tax=Enterobacteriaceae RepID=A4THA2_YERPP Length = 201 Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 64/162 (39%), Gaps = 3/162 (1%) Query: 106 NTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAAV 164 + + A ++ + + L R +I +TG+G SG+ A+ A L + A + Sbjct: 17 YSRELAALKENVDQQVWLQVLDALAECRGKIAVTGVGTSGIAARKVAHMLACVEQPAIYL 76 Query: 165 RDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRA 224 A + D+++ IS G EL + R K++++T +A+ Q + Sbjct: 77 NATDAAHGDLGFLGAQDIIILISRGGNSDELTRLLPTLQRKQVKIISVTENEQSAIAQVS 136 Query: 225 SHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDL 264 + L T E N + ++ L D + L+ + Sbjct: 137 ALVLKTHVKQEIDPLNMLATTSIVLVLALFDAICACLMARTG 178 >UniRef50_Q4J6D9 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=3 Tax=Sulfolobaceae RepID=GLMS_SULAC Length = 590 Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 36/192 (18%), Positives = 82/192 (42%), Gaps = 10/192 (5%) Query: 93 DPLRLVGEKLIKENTAAMYATLNVN--SEEKLHECVTMLRSARRIILTGIGASGLVAQNF 150 + K I E+ ++ T++ + + + + ++S+ RI++ G G S F Sbjct: 252 EGYPHFMIKEIHESPKSIRDTVDSLISDLDLIDKIIAEMKSSGRIVVVGAGTSYHAGLYF 311 Query: 151 AWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVL 210 + L + G N+ + + DDL+ AIS +G +L A + G +++ Sbjct: 312 SLLLSREGMNSFPLIASE---YYNFKAKKDDLIFAISQSGETLDLLQAVRKFKEEGARIV 368 Query: 211 AITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPER 270 ++T +AL + +++ +Y A + A+ Q LLF + + + Sbjct: 369 SLTNVIESALARESNYKIYMRA-GPEISVAATKTFITQL--ISLLF--IYSRLRRDNTNK 423 Query: 271 IRHSEALVKKLV 282 R ++ V++++ Sbjct: 424 FRGADTEVERVI 435 >UniRef50_C9AU43 Putative uncharacterized protein n=3 Tax=Enterococcus RepID=C9AU43_ENTCA Length = 207 Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 67/159 (42%), Gaps = 6/159 (3%) Query: 120 EKLHECVTMLRSA----RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQ 175 +++ + ++ A +R+ +TG+G VA A +G A + + + Sbjct: 32 QQMVKAKELILHAEKNHKRVHVTGVGKCSYVAGYAASLFSSVGTPAYFLDTTETVHGSAG 91 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL--YTIAE 233 D+++AIS +G +EL A + G +LA+TG ++L A L Y E Sbjct: 92 QVVAGDVVIAISNSGNTKELEYALAALKANGAVILAVTGNEDSSLASCAEVTLSSYVSQE 151 Query: 234 EQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIR 272 + N S+ AQ + +L + L + + ++ Sbjct: 152 GDSLNKPPRSSVIAQMIQLQVLSVLLQEAKEINLEDYLK 190 >UniRef50_B9KGQ0 Glucosamine--fructose-6-phosphate aminotransferase (GlmS) n=11 Tax=Rickettsiales RepID=B9KGQ0_ANAMF Length = 608 Score = 92.7 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 33/221 (14%), Positives = 68/221 (30%), Gaps = 4/221 (1%) Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN---S 118 +K+ A E+ + + P K I E + T++ Sbjct: 220 SLNDVKIYNESDEALDYETILISAPSTSTDKAPYEHFMLKEIHEQPKVIRDTIDQFISYG 279 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 + + +S + + G G+S + + L I + S Sbjct: 280 SVEFACNADLFKSLTHLTIVGSGSSYMAGLIAKYWLESIANIRVLLSIASEFRYHRMQIS 339 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 +D+ L IS +G + A R V+++T N+++ + L +A Sbjct: 340 ENDVFLFISQSGETADTLAALRHARRQHSTVISLTNVPRNSMESISDIALKILA-GPEVG 398 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 AS AQ + + L + +A ++ Sbjct: 399 VASTKTFSAQLAVLACFSLWLAKVRCVIAQSTYEQLLEALQ 439 >UniRef50_D1PBX9 Glutamine-fructose-6-phosphate transaminase n=13 Tax=cellular organisms RepID=D1PBX9_9BACT Length = 634 Score = 92.7 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 50/155 (32%), Gaps = 1/155 (0%) Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + L +A+RII+ G S + V + DD Sbjct: 308 ITDHRQQLLNAKRIIIVACGTSWHAGLIGKQMIENYCRIPVEVEYASEFRYRNPVVTKDD 367 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++AIS +G + A G + I +++ + Y AS Sbjct: 368 VVIAISQSGETADTLAAIKLAKESGAFIYGICNSIGSSIARETDTGTYIHV-GPEIGVAS 426 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 A Q + LL +A+ ++ ++ + Sbjct: 427 TKAFTGQVTVLILLALAIGKERGTISENEYQKITE 461 Score = 52.7 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 51/173 (29%), Gaps = 9/173 (5%) Query: 100 EKLIKENTAAMYATLNVNS-EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG 158 +K+ ++ V K+ + AR I G G VA A KL +I Sbjct: 457 QKITEQLWNIPAKMKEVLKLNNKIADLSRTFTYARNFIYLGRGFQYPVALEGALKLKEIS 516 Query: 159 -FNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRE-LNLAADEMLRVGGKVLAITGFT 216 +A + D ++ I+ E + E+ G+V+AI Sbjct: 517 YIHAEGYPAAEMKHGPIALIDSDMPVVVIATHNFMYEKVLSNIQEIKARQGRVIAIVSNG 576 Query: 217 PNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPE 269 + + A + E + A LL + + + Sbjct: 577 DETISKIADEVIELP--ETLECLEPLLATIP----LQLLAYHVAVCKGKDVDQ 623 >UniRef50_O26351 Uncharacterized protein MTH_249 n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=Y249_METTH Length = 197 Score = 92.3 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 70/195 (35%), Gaps = 21/195 (10%) Query: 96 RLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLM 155 + +++ ++ E +L ++ + A + + G G S L+ + FA +LM Sbjct: 4 MEILRNTVQKIAKHAIEAIDKVDEAELEMMISKIMDASSVFIVGTGRSELIGKAFAMRLM 63 Query: 156 KIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGF 215 +GF V D+ +D L+AIS +G + + LAA+ VG V+A+T Sbjct: 64 HLGFKVHVVGDVTTPA-----IRDEDCLIAISGSGETKTVTLAAETSRSVGATVVAVTAT 118 Query: 216 TPNALQQRASHCLYTIAEEQA--------------TNSASISACH--AQGMLTDLLFIAL 259 + L + + ++ + + + + + D L Sbjct: 119 PESTLTGYSDVVICIPSKTKEPWKYYTSGVLRGEYDDLTPMGTLFEDSTHLFLDGLIAEF 178 Query: 260 IQQDLELAPERIRHS 274 + + + Sbjct: 179 MSILGKREKDLKERH 193 >UniRef50_Q6GES3 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=311 Tax=Firmicutes RepID=GLMS_STAAR Length = 601 Score = 92.3 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 70/212 (33%), Gaps = 8/212 (3%) Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 + + + + V H ++ V ++I+E A ++ +++ Sbjct: 232 RDSYIAEIDASDAEKGVYAHYMLKEIHEQPAVMRRIIQEYQDAEGNLK--IDQDIINDVK 289 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 A RI + G S L K V + + S L + I Sbjct: 290 E----ADRIYVIAAGTSYHAGLVGKEFLEKWAGVPTEVHVASEFVYNMPLLSEKPLFVYI 345 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S +G + E ++G K L IT + L + A H L A AS A Sbjct: 346 SQSGETADSRAVLVETNKLGHKSLTITNVAGSTLSREADHTLLLHA-GPEIAVASTKAYT 404 Query: 247 AQGMLTDLLFIALIQQDLELA-PERIRHSEAL 277 AQ + +L + ++ A + +R + Sbjct: 405 AQIAVLSILSQIVAKEHGREADIDLLRELAKV 436 >UniRef50_Q1MQL2 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains n=5 Tax=Desulfovibrionales RepID=Q1MQL2_LAWIP Length = 609 Score = 92.3 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 54/156 (34%), Gaps = 4/156 (2%) Query: 98 VGEKLIKENTAAMYATLNVNSEEKLHECV---TMLRSARRIILTGIGASGLVAQNFAWKL 154 + +++ ++ ++E H L RII+ G+S L Sbjct: 256 MLKEIFEQPQVIEECLSERINQETDHIYFPELDNLPIPTRIIVVACGSSYHAGIWGRNIL 315 Query: 155 MKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITG 214 + +SP +L++ IS +G + A G KV+A+ Sbjct: 316 ERWAKIPTLPEIASEFRYQELITSPGELIIVISQSGETADTLAALKLAKEKGCKVIALCN 375 Query: 215 FTPNALQQRASHCLYTIAEEQATNSASISACHAQGM 250 + + + A +YT A + AS A +Q + Sbjct: 376 VIGSTIAREADATIYTQA-GPELSVASTKAVCSQMI 410 >UniRef50_A1RZ63 Glutamine amidotransferase, class-II n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RZ63_THEPD Length = 609 Score = 92.3 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 59/161 (36%), Gaps = 3/161 (1%) Query: 89 IRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQ 148 + + + ++ + ++ TL+ ++ L ++ A + + G S Sbjct: 246 VEKNGYKHHMLREIYE-VPESLMRTLSSVQKKYLQLAARLVTGADNVYIIANGTSLHAGM 304 Query: 149 NFAWKLMKI-GFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGG 207 ++ ++ G N V L ++ P L+LAIS +G ++ + E G Sbjct: 305 VASYYFSELVGVNPVVVSAAEFPLYYLENIGPGSLVLAISQSGETGDVLSSLYEAKLRGA 364 Query: 208 KVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 +L IT + + L + ++ L A + + Sbjct: 365 TILGITNYVGSRLARLSNLYLPIAA-GPELAVPATKTFTST 404 >UniRef50_Q9M1T1 Sugar-phosphate isomerase-like protein n=10 Tax=Embryophyta RepID=Q9M1T1_ARATH Length = 350 Score = 91.9 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 70/199 (35%), Gaps = 3/199 (1%) Query: 81 PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT-MLRSARRIILTG 139 + + + L K + + + +L + + TG Sbjct: 16 HNSLKNGGSSHQEISHDNLLNLFKSQQDLLNHFFKHLDLSQTLDFSRILLSTTGTVFFTG 75 Query: 140 IGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAA 199 +G S VA + L+ + F ++ + + AL + A SP D+L+ S +G EL Sbjct: 76 VGKSAFVANKVSQTLVSLSFRSSFLSPLDALHGDIGALSPRDVLVFFSKSGATEELLRLV 135 Query: 200 DEMLRVGGKVLAITGFTPNALQQRAS--HCLYTIAEEQATNSASISACHAQGMLTDLLFI 257 G ++++T + N L L E N A +++ Q + D + + Sbjct: 136 PCARAKGAFLVSLTSVSGNPLAGVCDMNVHLPLQRELCPFNLAPVTSTAIQMVFGDTIAV 195 Query: 258 ALIQQDLELAPERIRHSEA 276 AL+ E + A Sbjct: 196 ALMAARNLSKEEYAANHPA 214 >UniRef50_Q1IND2 Sugar isomerase (SIS) n=2 Tax=Acidobacteria RepID=Q1IND2_ACIBL Length = 304 Score = 91.9 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 36/242 (14%), Positives = 75/242 (30%), Gaps = 26/242 (10%) Query: 66 LKLALSEALAS--QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 ++ + A+ V I+ + + + + A+ L E + Sbjct: 1 MRYKPANDTANLRTERPNPVSADLDIKSPLEIVEIINREDQRVAKAVKKVLPQI-AEAIA 59 Query: 124 ECVTMLRSARRIILTGIGASGLV-AQNFAWKLMKIGFN------------------AAAV 164 + LR R+I G G SG + A + + A Sbjct: 60 LVESALRRGGRLIYVGTGTSGRIGALDASECPPTFNTRPEQVQYLIAGGEQALANAVEAS 119 Query: 165 RDM---HALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQ 221 D + D+++ ++ +G A + R G K +AI + L Sbjct: 120 EDSREVGQADMAKRKPGKKDVVIGLAASGRTPYTIAAMEYARRKGSKTVAIVCNPESPLA 179 Query: 222 QRASHCLYTIA-EEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A + E + S + A AQ M+ +++ + + + + + +K Sbjct: 180 DAADVAIEVEVGPEVVSGSTRMKAGTAQKMICNMITTGALTRLGYVYGNLMVNLHLKNQK 239 Query: 281 LV 282 LV Sbjct: 240 LV 241 >UniRef50_C8ZXB1 Putative uncharacterized protein n=4 Tax=Enterococcus RepID=C8ZXB1_ENTGA Length = 273 Score = 91.9 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 40/264 (15%), Positives = 86/264 (32%), Gaps = 14/264 (5%) Query: 15 AQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEAL 74 + + +A LL S +A VS+S++ KFA+ +G++ + LK + S Sbjct: 18 SSTYYHIAQTLLNNYSIIDKSSISDIATLCTVSKSTISKFARSIGFEDYYELKKS-STFA 76 Query: 75 ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARR 134 ++ I N I + + + + A ++ + E L + + Sbjct: 77 ENKYHFDLNYISNIINPIEKNG--YDDYLDAIIKDISAFKQQSNMRSIDELAKCLTTYNK 134 Query: 135 IILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG---- 190 + G+ S A +F +KL G + + ++ + + LL+ S +G Sbjct: 135 VGAFGLLFSESAAIDFQYKLAYAGKFIITYQSDLKQIEFIEQADEETLLIIFSNSGGFLQ 194 Query: 191 --VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 R+ + K+ IT + + E + S Sbjct: 195 RQQLRDDIPYRNVFENTKAKIFVITANEEVRNYRFVHDVILFP-HETIFQTHSFIYQI-- 251 Query: 249 GMLTDLLFIALIQQDLELAPERIR 272 + D++ Q + Sbjct: 252 --IMDIIVSKYRQYLEPPTISHKQ 273 >UniRef50_D0RRD5 Arabinose 5-phosphate isomerase n=2 Tax=alpha proteobacterium HIMB114 RepID=D0RRD5_9RICK Length = 324 Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 28/180 (15%), Positives = 65/180 (36%), Gaps = 6/180 (3%) Query: 95 LRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILT-GIGASGLVAQNFAWK 153 + G+KLIKE A+ + + V ++ + + I+ G+G S L+ + Sbjct: 7 ILSFGKKLIKEEINALIKLHKNLNI-NFSKAVNLINNTKGNIVFSGVGKSKLILEKTCGT 65 Query: 154 LMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 +G + + A ++ +D L+ S +G EL + K++ I+ Sbjct: 66 FSSLGVPSYVLDASQATHGSLGNLKNNDTLIIASNSGNTNELIAIFKFAKKYRIKIIGIS 125 Query: 214 GFTPNALQQRASHCLYTI----AEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPE 269 + + L + + + + S+ + D L I++ + + Sbjct: 126 SNSKSQLFKNSDINIVYPKVKEIGDSNFKLVPTSSTTTLSAIGDALAISVAKLRGFTIRD 185 >UniRef50_D1PR02 Transcriptional regulator, RpiR family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PR02_9FIRM Length = 268 Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 42/227 (18%), Positives = 78/227 (34%), Gaps = 14/227 (6%) Query: 1 MNGLL---RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQK 57 M L I L +D +A +L LS QQLA+ VS+S++ KF ++ Sbjct: 1 MGILYNRLLIVLNDSDLDSTDYHIAMVMLQNMRRLAGLSIQQLADLCNVSKSTISKFIRE 60 Query: 58 LGYKGFPALK-LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNV 116 LGY+ F + A+ + V ++++ + Sbjct: 61 LGYEDFADFRDAAVFQDNKYHNNYNFVEDVMGFLEHHSGDSYLLTVLRDMQES----YAS 116 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA 176 + V + + ++ G+ S A + KL G A + +A ++ Sbjct: 117 LDWAMVDRLVEDIATHEKVGAFGMMFSETAALDLQIKLGYNGKFIATSMNDRKQMAYLRH 176 Query: 177 SSPDDLLLAISYTG----VRRELNLAADE--MLRVGGKVLAITGFTP 217 + D L++ S +G R + + KV+ IT Sbjct: 177 ADADTLVIIFSDSGDYLNRYRNIRDFVRKSDFDDTKAKVVLITSSQE 223 >UniRef50_A3WGF3 CBS domain:Sugar isomerase (SIS):KpsF/GutQ family protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WGF3_9SPHN Length = 328 Score = 91.2 bits (225), Expect = 3e-17, Method: Composition-based stats. Identities = 40/171 (23%), Positives = 68/171 (39%), Gaps = 7/171 (4%) Query: 101 KLIKENTAAMYATLNVNSEEKLHECVTMLRSA-----RRIILTGIGASGLVAQNFAWKLM 155 K + + S+ L A RII+TGIG SG +A+ A + Sbjct: 15 KTLDIEIGGLKDLKRALSDSGLGNAFERAVDAFNSNKGRIIVTGIGKSGHIARKIAATFV 74 Query: 156 KIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGF 215 G +A + A + S DD++ AI+++G +EL+ + +++ T Sbjct: 75 STGTSALYLHPGEASHGDLGTISRDDVVFAITWSGTTQELSDIVNFCGINNQQLVVATAH 134 Query: 216 TPNALQQRASHCLYTI--AEEQATNSASISACHAQGMLTDLLFIALIQQDL 264 + + + A CL E A S+ Q +L D L +ALI+ Sbjct: 135 PQSWIGKAADICLTLPMVREACPNELAPTSSTTMQMVLGDALAVALIEARG 185 >UniRef50_A6ALT5 Transcriptional regulator, RpiR family protein n=2 Tax=Vibrio harveyi RepID=A6ALT5_VIBHA Length = 250 Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 41/263 (15%), Positives = 91/263 (34%), Gaps = 32/263 (12%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +R GL+ + +LA+++ + ++ +LA A VS SSV + +++LGY+ Sbjct: 7 LLATLRLIKPGLSPALTQLAEFIEDNLSSVSRMTVTELAEVADVSVSSVSRLSRELGYRN 66 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + K+A +++ + + V ++ E T ++ + Sbjct: 67 YGDFKMAAHSSIS------------FVPNVNSGAEV--DVLDEAEQLFSLTKDLLRDFNF 112 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 E LR ++ + + G S + Q F + G + A + D+ Sbjct: 113 DEFGAYLRRSKGVFVAGENTS--LTQLFTDACLNHGKRVVPLTSTAHCEAIQPEVTYKDI 170 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRA------SHCLYTIAEEQA 236 + IS E + + +A+ + + A + + I E Sbjct: 171 FMFISDCPPSAEWLSVLQGLSQSDCVTIAV-----SPIVPEALGQTYLDYWVPIIGEGN- 224 Query: 237 TNSASISACHAQGMLTDLLFIAL 259 + + ++L L Sbjct: 225 ----PTFSRINTLLTLEVLTQQL 243 >UniRef50_Q04HE6 Hexulose-6-phosphate isomerase n=6 Tax=Firmicutes RepID=Q04HE6_OENOB Length = 180 Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 75/183 (40%), Gaps = 11/183 (6%) Query: 101 KLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFN 160 L+ + + ++ E++L ++ +RI + G G SGL+A+ FA +LM IG+ Sbjct: 2 TLVNQVLQEITTVMDDVDEKQLQAVEKIISKEKRIFVLGAGRSGLMAKGFAMRLMHIGYT 61 Query: 161 AAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNAL 220 + + + + D+L+++S +G + ++ + G +++A+T + + L Sbjct: 62 VYVIGET-----ITPSIAAGDVLVSVSGSGTTGSVLEPTEKAHQNGVEIVAVTSNSQSPL 116 Query: 221 QQRASHCLYTIAEEQATNSASISACHAQGM------LTDLLFIALIQQDLELAPERIRHS 274 + + L +A + + D+L + L ++D Sbjct: 117 AKNSDVALIVPGATKAGDGVKSIQLLSTLFDQTTHITLDILTLMLSRRDNTSNDAAKAAH 176 Query: 275 EAL 277 + Sbjct: 177 SNM 179 >UniRef50_C2DAE3 3-hexulose-6-phosphate isomerase n=7 Tax=Enterococcus RepID=C2DAE3_ENTFA Length = 197 Score = 90.8 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 69/187 (36%), Gaps = 14/187 (7%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG 158 + + A + ++ V ++ A I L G G SG+ + FA +LM IG Sbjct: 14 MKNYTLDILAELTQNGQRIDTNEIAHFVEQIKQANHIFLNGAGRSGIAIRAFANRLMHIG 73 Query: 159 FNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPN 218 F+ + V ++ + + P DLL+ S +G L A++ + G + +T + Sbjct: 74 FSVSIVGEISSPHS-----KPGDLLIICSGSGETGSLKSLAEKAKQSGIDLALVTMKKES 128 Query: 219 ALQQRASHCLYTIAEEQATNSASISACHA-------QGMLT--DLLFIALIQQDLELAPE 269 + Q A L + N ++ Q D + + L+ + E + Sbjct: 129 TIGQLADVVLVLPGTTKEENDRETASFAQPMGSAFEQLAFLTFDGMVLNLMDELGETSET 188 Query: 270 RIRHSEA 276 + Sbjct: 189 MFKRHAD 195 >UniRef50_B0RAL7 6-phospho-3-hexuloisomerase n=3 Tax=Micrococcineae RepID=B0RAL7_CLAMS Length = 203 Score = 90.8 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 43/191 (22%), Positives = 74/191 (38%), Gaps = 12/191 (6%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWK 153 + + EN A + +L E ++R RR+ G G SGL + A + Sbjct: 17 DVATALTLIADENARVARALAEPDLAARLDEAARVIRDGRRVFALGAGRSGLALRMTAMR 76 Query: 154 LMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 M +G +A V + + + D+LL S +G + AA VG +++A+T Sbjct: 77 FMHLGLDAHVVGEATSPA-----IAEGDVLLVASGSGTTAGIVAAAQTAHDVGARIVALT 131 Query: 214 GFTPNALQQRASHCLYTIAEEQATNSASISACHA-------QGMLTDLLFIALIQQDLEL 266 + L A + A + + ++SA +A ++ D +F AL Q Sbjct: 132 TADDSPLADLADVTVLIPAAAKQDHGGTVSAQYAGGLFELSVALVGDAVFHALWQASGLS 191 Query: 267 APERIRHSEAL 277 A E L Sbjct: 192 ADELWPRHANL 202 >UniRef50_O83833 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=3 Tax=Bacteria RepID=GLMS_TREPA Length = 635 Score = 90.8 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 30/216 (13%), Positives = 60/216 (27%), Gaps = 11/216 (5%) Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 + + + + QP + ++ + R ++ V Sbjct: 250 RHHMHQEIWQQPHAIRHTLNAYMSFSSSSRAQVRTFGED---------RVLDGTSCKTFE 300 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 + R R+ + G S + V +++L I Sbjct: 301 RLFRRITRVRIIACGTSYHAGLVARYWFEAFAGVGCQVEIASEYRYRTSVVHAREIVLTI 360 Query: 187 SYTGVRRELNLAADEMLRVGGKV-LAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 S +G + A G +AI + L + + L T A AS + Sbjct: 361 SQSGETADTIAALRLAKTQGYLCAIAICNGARSTLVRESDAVLLTHA-GSEIGVASTKSF 419 Query: 246 HAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 Q + +L + Q L E A +++L Sbjct: 420 TTQLVCLLVLTRMIAQAKKILTQEPEDALSAALQRL 455 >UniRef50_Q1QAN2 KpsF/GutQ family protein n=2 Tax=Psychrobacter RepID=Q1QAN2_PSYCK Length = 330 Score = 90.8 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 37/163 (22%), Positives = 62/163 (38%), Gaps = 2/163 (1%) Query: 103 IKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAA 162 I AA+ + C +L R+++TG+G SGL+ + A G + Sbjct: 21 INTEKAALALLTEQIDDRFAQACDIILACQGRVVVTGMGKSGLIGRKIAATFASTGTPSF 80 Query: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222 + A + D+LLAIS +G E+ + + + +++I+ L Sbjct: 81 FMHPGEAGHGDLGMLVKGDVLLAISNSGESDEIKMLLPVVKHLNIPLISISRDKRGMLPH 140 Query: 223 RASHCLYT--IAEEQATNSASISACHAQGMLTDLLFIALIQQD 263 A L E N A S+ A L D L +AL+ Sbjct: 141 AADIILTLGKSQEACPLNLAPTSSTTATLALGDALAVALVHAR 183 >UniRef50_D1RBC9 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1RBC9_9CHLA Length = 609 Score = 90.8 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 66/216 (30%), Gaps = 6/216 (2%) Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 K AL S + + + + L L E ++ V Sbjct: 233 KTEKMHALLESASKGSYEHYTLKEIFEQPQTIRNALSGRFIQDYGTAL----FEGINFEV 288 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 L S RI++ G S A+ L V L +AI Sbjct: 289 NELLSVERILILACGTSWHAGYLAAYMLEDRARIPVQVEISSEFRYKNPVVPAGTLAIAI 348 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA--EEQATNSASISA 244 S +G + A E+ G KVLAI + L + A ++ A E ++ + ++ Sbjct: 349 SQSGETADTLAAVRELKTKGVKVLAICNVEGSHLAREADASIFLKAGQEIGVCSTKAFTS 408 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 L LL + D + + + L + Sbjct: 409 QVVVLSLFTLLMARMRHMDKKEGQIFLEALQKLPDQ 444 >UniRef50_C3RI60 Predicted protein n=2 Tax=Bacteria RepID=C3RI60_9MOLU Length = 269 Score = 90.4 bits (223), Expect = 6e-17, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 87/248 (35%), Gaps = 6/248 (2%) Query: 12 QGLAQS-DKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 + L+ + + +A ++ + +S +Q+A EA +S +SV +F QK+GY F K L Sbjct: 17 ENLSNTNEYNIARIIIEHIGDIKTVSLEQIAQEANISIASVSRFVQKIGYSSFQDFKDGL 76 Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 + + Q L + + L E + + T EKL +L Sbjct: 77 -DYFIRNLNMVRTVSNMQQFMRTSLDNLADSLYVEAISNLRQTKLNLDMEKLVAITKLLL 135 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHAL--LATVQASSPDDLLLAISY 188 ++R + G + L+ A + +LL +S Sbjct: 136 NSRSVTFIGDTHEMIDFYTVQLDLVANEVPAYLFDLQEFQDIHSDFFKDGDTLVLLNVSN 195 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 ++ + K++ Q+ + +Y ++ N S + Sbjct: 196 DFYSEIQKRVVEKASQKNLKLVVFAQDDLAE-QKIFDY-IYQYGIPKSINDGYYSLFYLS 253 Query: 249 GMLTDLLF 256 ++++L++ Sbjct: 254 QIISELIY 261 >UniRef50_Q6F0Y2 Putative uncharacterized protein n=1 Tax=Mesoplasma florum RepID=Q6F0Y2_MESFL Length = 260 Score = 90.4 bits (223), Expect = 6e-17, Method: Composition-based stats. Identities = 40/272 (14%), Positives = 98/272 (36%), Gaps = 22/272 (8%) Query: 2 NGLLRIRQRYQG-LAQSDKKLADYLLLQPDTARHLSSQ--QLANEAGVSQSSVVKFAQKL 58 + L ++ + L + + DY+ + + +LA A S++ +K+ Sbjct: 3 SFLAKLSTIEENNLTTRELIIVDYIKSNSKQIVEENIKIDELARRAKTGFSAIYNLLKKM 62 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 G+ + L+ + + + E + + + Sbjct: 63 NIDGYRDFMICLANDVEHAELNIAKND--------------ENVANGYINLIKQNYTLIK 108 Query: 119 EEKLHECVTMLRSARRIIL-TGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQA 176 + L + + ++ S+ RI++ G A + + G N + D ++ ++ Sbjct: 109 KANLVKTINLIDSSPRIVICYWEGVLRGPAMDLSNFFYNHGVNVTLLDSDWDSINNRIKN 168 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPN-ALQQRAS--HCLYTIAE 233 + +DL + ++ G L+ + + + GK + I+G P+ +++ AS H L Sbjct: 169 TQTNDLYIFLTKYGTSTHLSKVIEAIRKQKGKSIFISGKVPSKEVEENASLVHTLIVDGV 228 Query: 234 EQATNSASISACHAQGMLTDLLFIALIQQDLE 265 E ++ IS DLL + + + Sbjct: 229 EINDDNVLISKSLPFHYFNDLLIYHYLNSEKK 260 >UniRef50_A8MC94 Glutamine amidotransferase class-II n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MC94_CALMQ Length = 595 Score = 90.4 bits (223), Expect = 6e-17, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 74/190 (38%), Gaps = 5/190 (2%) Query: 93 DPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAW 152 + K I E + +NV E L + +++ A+ II TG G S + + Sbjct: 248 GSFQHYMIKEIYEEPEVLARAVNVLQREYLDDAASIVAKAKNIIFTGSGTSYYASLIGKY 307 Query: 153 KLMKIG-FNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLA 211 L ++G A A+ V+ P L++AIS +G ++ R G VL+ Sbjct: 308 YLEELGGVKADAIPAGEFPYLGVRYVEPGTLIIAISQSGESTDIIRTIRWAKRKGAIVLS 367 Query: 212 ITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQ-DLELAPER 270 I +AL + ++ L A + + A + +L +A + ++ A Sbjct: 368 IVNRLGSALMRESNVYLPMGA-GPELAVPATKSFVASIAI--MLQLAYAVKGNVNDARSL 424 Query: 271 IRHSEALVKK 280 I + ++ Sbjct: 425 INKAIIMLNN 434 >UniRef50_Q024T7 KpsF/GutQ family protein n=2 Tax=Bacteria RepID=Q024T7_SOLUE Length = 339 Score = 90.4 bits (223), Expect = 6e-17, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 56/167 (33%), Gaps = 2/167 (1%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG 158 ++ ++ E + +L ++++TGIG SG +A+ L G Sbjct: 25 ARAAMRIEAESIARAAERLDGELVRAVELILAHPGKVVVTGIGKSGHIARKIVATLCSTG 84 Query: 159 FNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPN 218 A + A + +P D + IS G EL + + ++ I G + Sbjct: 85 TAAVFLHPAEAAHGDLGIYTPGDPTIVISKNGASSELQSLVPMLRQFRSPLVGILGNAHS 144 Query: 219 ALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQD 263 L L E N A ++ L L IAL+ Sbjct: 145 PLGAEVDVLLDASVEREADPHNLAPTASAVTALALGHALAIALMCAR 191 >UniRef50_C2DAD6 3-hexulose-6-phosphate isomerase n=2 Tax=Enterococcus faecalis RepID=C2DAD6_ENTFA Length = 192 Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 68/182 (37%), Gaps = 10/182 (5%) Query: 101 KLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFN 160 K E + N S++++ ++ A I L G G SGL+ + FA +L+ +G++ Sbjct: 15 KFFNEIIDEVLTIGNEISDQQVDRMTKAIQGANHIFLAGAGRSGLMIRAFANRLLHLGYS 74 Query: 161 AAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNAL 220 + V ++ + DL L S +G L A G + T + + L Sbjct: 75 VSLVGEISSPHT-----KSGDLFLIGSGSGETTSLVNQAKIAKDNGVVIGLFTTNSSSTL 129 Query: 221 QQRASHCLYTIAEEQATNSA---SISACHAQ--GMLTDLLFIALIQQDLELAPERIRHSE 275 + A + + + + + + Q L D + + L+++ E Sbjct: 130 GEIADQVVIIPTQSKQSKDEALQPMGSLFEQTSLFLYDSIILNLMEKTGETNQTMKTRHA 189 Query: 276 AL 277 L Sbjct: 190 DL 191 >UniRef50_Q72V57 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=4 Tax=Leptospira RepID=GLMS_LEPIC Length = 610 Score = 90.0 bits (222), Expect = 7e-17, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 61/195 (31%), Gaps = 7/195 (3%) Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 + L + H I+ + K+I+E + ++ +L Sbjct: 237 KQELRWEDLDKGGYPHYMIKEIHEQAGIFRKIIQERILE----NSEIVFPEIKLSKDVLS 292 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 RII+ G S L D L++ IS +G Sbjct: 293 RVNRIIIQAAGTSYYAGMIGKHYLENFAKIQTDTEASSEFRYRNPVVEGDTLIMGISQSG 352 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGM 250 + + E KV+++ + + + + + T A AS A AQ Sbjct: 353 ETADTLASIHEAKAKFIKVVSLVNNVNSTIARESDSYIRTDA-GPEIGVASTKAFTAQ-- 409 Query: 251 LTDLLFIALIQQDLE 265 + +LL ++ +L+ Sbjct: 410 VLNLLLFSIYMANLK 424 >UniRef50_Q14LK5 Hypothetical transmembrane protein n=1 Tax=Spiroplasma citri RepID=Q14LK5_SPICI Length = 170 Score = 90.0 bits (222), Expect = 8e-17, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 79/158 (50%), Gaps = 6/158 (3%) Query: 29 PDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQ 88 P+ + S ++ + G++ S++ + ++K+GY+ F K+ + E + + Sbjct: 5 PEYFLNNSITIISKKLGIATSTISRLSKKVGYRNFKEFKMFIYEKIKQ------IKSSFN 58 Query: 89 IRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQ 148 + +D L + +K+ N +++ T+N +L + + ++RI + G+G+S ++ Sbjct: 59 FQYNDNLPNLIQKIKNINLYSVFETINNLDLLELENIINCIFISKRIFIFGVGSSAVICS 118 Query: 149 NFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 L+K+GFN+ +D H L + + + ++L++ Sbjct: 119 ELNNSLIKLGFNSYTSQDFHGQLLFLNSFNDNNLMIFF 156 >UniRef50_A8A8V3 Glutamine--fructose-6-phosphate transaminase n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A8V3_IGNH4 Length = 592 Score = 90.0 bits (222), Expect = 8e-17, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 63/210 (30%), Gaps = 9/210 (4%) Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN--SEEKLHECVTMLRS 131 + + K I E + TL +K+ E V +L Sbjct: 237 VRRRLSFIKPTWSPVQAQKGSYEYFMLKEIHEQPQVVKETLISIASEWDKVEEVVNLLE- 295 Query: 132 ARRIILTGIGASGLVAQNFAWK-LMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 ++ G S F++ + + G + A + ++AIS +G Sbjct: 296 -GWAVVVAAGTSYHAGLIFSYNVMKETGRYIPVIDASEAPHFSKLL---KGTVVAISQSG 351 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGM 250 + A G KV+ + + L + A LYT A A+ Q Sbjct: 352 ETYDTLKAVRIAKENGAKVVGVVNVVGSTLDREADVSLYTRA-GPEIGVAATKTFLTQLS 410 Query: 251 LTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + L ++ + E + K+ Sbjct: 411 VLNALVARMVGEGANRVREMANELSKITKE 440 >UniRef50_C6QLS8 6-phospho 3-hexuloisomerase n=2 Tax=Geobacillus RepID=C6QLS8_9BACI Length = 187 Score = 90.0 bits (222), Expect = 8e-17, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 77/185 (41%), Gaps = 13/185 (7%) Query: 101 KLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFN 160 + + E + T + ++E+ + V + A++I + G G SG ++++FA ++M +G + Sbjct: 7 QYLGEILQELNRTADFIADEEAEKLVNGILQAKKIFVAGAGRSGFMSKSFAMRMMHMGLD 66 Query: 161 AAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNAL 220 A V + DD+L+ S +G R L A++ +G + +T F + + Sbjct: 67 AYVVGET-----ITPNLEQDDILIIGSGSGETRSLVSMAEKAKSLGATIALVTIFPASTI 121 Query: 221 QQRASHCLYTI------AEEQATNSASISACHAQGMLT--DLLFIALIQQDLELAPERIR 272 + A + A+ + + Q +L D + + +++ + + Sbjct: 122 GKLADITVKLPGSPKDQADNGYKTIQPMGSLFEQTLLLFYDAVILRCMEKKGLDSNTMFK 181 Query: 273 HSEAL 277 L Sbjct: 182 RHANL 186 >UniRef50_Q8Q038 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=131 Tax=cellular organisms RepID=GLMS_METMA Length = 618 Score = 90.0 bits (222), Expect = 9e-17, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 68/204 (33%), Gaps = 9/204 (4%) Query: 85 IHNQIRGDDPLRLVGEKLIKENTAAMYATLN--------VNSEEKLHECVTMLRSARRII 136 + K I E +A++ TL ++L+ ++ R+ Sbjct: 247 WDFEAAEKAGYEHFMLKEIHEQVSAIHNTLAGKVSELEGAIYLKELNLNDDEIKKLSRVQ 306 Query: 137 LTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELN 196 + G S + ++ + L +AI+ +G + Sbjct: 307 ILACGTSWHAGLLGKYLFEQLAGIHCDIDICSEYRYRNPVMHEGTLAIAITQSGETADTL 366 Query: 197 LAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLF 256 A E++ LAIT + + + A+ LYT A A+ Q +L LL Sbjct: 367 AAVREIMSYNCPTLAITNVVGSTITREANSVLYTRA-GPEIGVAATKTFSTQLILLYLLA 425 Query: 257 IALIQQDLELAPERIRHSEALVKK 280 + +L+P+ ++ ++K Sbjct: 426 VKFALVRGKLSPDYVKSFITEIRK 449 Score = 58.0 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 21/144 (14%), Positives = 47/144 (32%), Gaps = 3/144 (2%) Query: 97 LVGEKLIKENTAAMYATLNVNSEEK-LHECVTMLRSARRIILTGIGASGLVAQNFAWKLM 155 + I E + ++++ + EC ++ G S +A A KL Sbjct: 438 DYVKSFITEIRKVPGEIQQILNQKEVIRECAENFACSKSYFFLGRHLSYPIALEGALKLK 497 Query: 156 KIGF-NAAAVRDMHALLATVQASSPDDLLLAISYTGVRRE-LNLAADEMLRVGGKVLAIT 213 +I + +A + ++AI+ G E + E+ V+A+ Sbjct: 498 EISYVHAEGFAAGELKHGPIALLDEGAPVVAIATKGQTYEKMLSNIKEVKARDAYVIAVA 557 Query: 214 GFTPNALQQRASHCLYTIAEEQAT 237 + + A L + ++ Sbjct: 558 NINDTEIGKYADVVLRVPSCDELL 581 >UniRef50_B3SFH4 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3SFH4_TRIAD Length = 331 Score = 90.0 bits (222), Expect = 9e-17, Method: Composition-based stats. Identities = 17/127 (13%), Positives = 42/127 (33%), Gaps = 2/127 (1%) Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVR 192 ++ + G+S + + A + + IS +G Sbjct: 19 SKVSIIACGSSYNAGMVAKYWFESYAKIPVEIDFASEFRARNVIYDKKGVYIFISQSGET 78 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGM-L 251 + A E + + + +++ + + + A T+ A+ + AQ M L Sbjct: 79 LDTLSALKEAKKQNVTTIGLINNLNSSIANLSDYLIPIEA-GVETSVAATKSFIAQLMKL 137 Query: 252 TDLLFIA 258 +L+ +A Sbjct: 138 LNLVLMA 144 Score = 43.4 bits (101), Expect = 0.008, Method: Composition-based stats. Identities = 22/154 (14%), Positives = 50/154 (32%), Gaps = 5/154 (3%) Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 K +++ + I + A + L+V K+ E Sbjct: 128 KSFIAQLMKLLNLVLMASKQKNIITQSSYLGMLSD-FNSEIAKLCDILSV--NRKIIEIS 184 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIG-FNAAAVRDMHALLATVQASSPDDLLLA 185 + A+ +I G + A KL ++ A+ ++ D L++ Sbjct: 185 KAITQAKNVIFIGRNHMYPICLEGALKLKELSYLPVFAIAAGELKHGSIALVDEDSLIIG 244 Query: 186 IS-YTGVRRELNLAADEMLRVGGKVLAITGFTPN 218 ++ V + + +E+ G K++ +T N Sbjct: 245 LAPKNDVYNKTLSSIEEVKARGAKIVLLTDSKDN 278 >UniRef50_C2KYX2 Glutamine--fructose-6-phosphate transaminase (Isomerizing) n=2 Tax=Clostridiales RepID=C2KYX2_9FIRM Length = 625 Score = 90.0 bits (222), Expect = 9e-17, Method: Composition-based stats. Identities = 33/221 (14%), Positives = 71/221 (32%), Gaps = 12/221 (5%) Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNV--------NSEE 120 A++E SQ + + ++V + L+ T S E Sbjct: 238 AIAELDQSQIHKGEYLHFMEKEIFEQPKVVKDTLLYACNQENEETAGNAGNSEYPEFSYE 297 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + R+ + G++ + V Sbjct: 298 AFSMTEKDFQEISRVRVIACGSAYHAGWVLKSVCESLARVPVQVELASEFRYNHPILEKG 357 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +L+++IS +G + A E ++G K L+I +A+ + + YT A A Sbjct: 358 ELVISISQSGETADTLAALKEAKKLGAKTLSIVNVKGSAIARESDFVFYTQA-GPEIAVA 416 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + A Q + + L + +++ E + +L ++L Sbjct: 417 TTKAYSCQLAAGYIFSLLLAKAKGKISKE---ETRSLTEEL 454 >UniRef50_B5S7Q3 Putative uncharacterized protein (Fragment) n=1 Tax=Ralstonia solanacearum RepID=B5S7Q3_RALSO Length = 577 Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 40/220 (18%), Positives = 65/220 (29%), Gaps = 13/220 (5%) Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS---EEKL-HECVT 127 + E V H P R +K I E A+ TL + Sbjct: 231 HDHLVEREVKVVEAHAAAVELGPYRHFMQKEIFEQPRALGDTLEGVQGFAPDLFGPRAAE 290 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAIS 187 +L +++ G S + L I V +P+ L++ IS Sbjct: 291 VLSKVDSVLILACGTSYYSGCTAKYWLESIAKIPTQVEVASEYRYRDTVPNPNALVVVIS 350 Query: 188 YTGVRRELNLAADEMLRVGGK-VLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 +G + A +G LAI +A+ + T A AS A Sbjct: 351 QSGETADTLAALRHARELGHTHTLAICNVATSAMVRETELKFLTRA-GTEIGVASTKAFT 409 Query: 247 AQGMLTDLLFIALIQQDL-------ELAPERIRHSEALVK 279 Q +L + +Q E A +RH + + Sbjct: 410 TQLAALYMLALTFAKQRGLLNAQQEEDALRHLRHLPSALN 449 >UniRef50_P17115 Protein gutQ n=113 Tax=Gammaproteobacteria RepID=GUTQ_ECOLI Length = 321 Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 67/167 (40%), Gaps = 2/167 (1%) Query: 100 EKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF 159 + + ++ + +L +++++GIG SG + + A L G Sbjct: 10 RQTLMLELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGT 69 Query: 160 NAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNA 219 A V AL + D++L ISY+G +EL+L + +LA+TG + Sbjct: 70 PAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSP 129 Query: 220 LQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQDL 264 L A L E + + A S+ M+ D L +A++Q Sbjct: 130 LGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176 >UniRef50_B5YDY2 Glucosamine--fructose-6-phosphate aminotransferase, isomerizing n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=B5YDY2_DICT6 Length = 607 Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 31/221 (14%), Positives = 67/221 (30%), Gaps = 16/221 (7%) Query: 68 LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 L + E VP + K I E + L+ +K Sbjct: 224 YDLKTNNYIEVEPIIVPQDGIRAEKNGYPHFMLKEIFEQPLVVRRILSTLERDKDKFIFE 283 Query: 128 MLRSA-------RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +++ R++ + G G S + K V + + Sbjct: 284 DIKNVDISWEKIRKVFIVGCGTSYHAGYYAKFLWEKELPYFIEVELASQMHHRNLNIPEE 343 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 L + IS +G ++ ++ G KVL++ + + + + + + A A Sbjct: 344 TLFITISQSGETADVISTLRKVKENGFKVLSLVNNPQSTVARESDYFINLRA-GVEIGVA 402 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + A+ + +LL E R+ + + + K Sbjct: 403 ATKTFMAELVYLELL--------KEYIKSRLYNIKIDLDKW 435 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 18/133 (13%), Positives = 37/133 (27%), Gaps = 3/133 (2%) Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG-FNAAAVRDMHALLATVQASS 178 +++ E R + G + +A A KL +I +A + + Sbjct: 451 DRVFEVAKKYYHKRNFLYLARGKNFPLALEGALKLKEISYIHAEGIPAGEMKHGPIALLD 510 Query: 179 PDDLLLAISYTGVRRE-LNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 P+ + I Y + +E ++AI L+ + Sbjct: 511 PETPVFGIVYKDETYSKMINNLEEAKARKAPIIAIGNEWDEKLESLVDDLIPVP-NVDPF 569 Query: 238 NSASISACHAQGM 250 + A Q Sbjct: 570 YYPYMGAMVLQLF 582 >UniRef50_Q6MBL9 Probable glutamine-fructose-6-phosphate transaminase (Isomerizing) n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MBL9_PARUW Length = 607 Score = 89.2 bits (220), Expect = 1e-16, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 69/218 (31%), Gaps = 9/218 (4%) Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE-------KLHE 124 ++ QI +++ ++ A A L+ E +L Sbjct: 225 HHKITKESQFIEGDLEQISKGSFEHFTLKEIYEQPQAIRNALLSRILPEYGTALFEELDF 284 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 +T L + RI++ G S A+ + V P ++ Sbjct: 285 NMTDLLTVERILILACGTSWHAGCVAAYLIEDKARIPVQVEISSEFRYKNPVVPPGTFVI 344 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY--TIAEEQATNSASI 242 AIS +G + A E+ G +VLA+ + L + A ++ AE ++ + Sbjct: 345 AISQSGETADTIAAVKEVKAKGARVLALCNVQGSTLTREADETIFLKAGAEIGVCSTKAF 404 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ L LL + + + L + Sbjct: 405 TSQVVVLALFTLLLARMRHMSKGEGQDFLEAILKLPDQ 442 Score = 40.7 bits (94), Expect = 0.052, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 48/171 (28%), Gaps = 9/171 (5%) Query: 100 EKLIKENTAAMYATLNVNSEE-KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG 158 + ++ V + + G + A KL +I Sbjct: 430 QDFLEAILKLPDQVQMVLDQSIAIERIAKKYAGFDNFFYLGRRYMFPTSLEGALKLKEIS 489 Query: 159 -FNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRE-LNLAADEMLRVGGKVLAITGFT 216 NA + + D +A+ E L E+ GK++AI Sbjct: 490 YINANGYAAGEMKHGPIALINEDCPTVALCANRQTFEKLLSNLMEIKARHGKIIAIVEEQ 549 Query: 217 PNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELA 267 A+++ A +Y S + ++T LL + ++ Sbjct: 550 EKAIEKIADDVIYIPHVIDELASILTT------VVTQLLAYYIAKERGADI 594 >UniRef50_UPI00016C3AB5 hypothetical protein GobsU_16589 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3AB5 Length = 344 Score = 89.2 bits (220), Expect = 1e-16, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 67/178 (37%), Gaps = 2/178 (1%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWK 153 ++++ A++ + +L R+ + G+G S + Q Sbjct: 6 DQLAYARRVLRAEAASLDVVAGRLDDGFNRVADVLLACRGRVAVIGVGKSADIGQKTVGT 65 Query: 154 LMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 L G A + A+ + + PDD+ L +S++G EL + ++ VLAIT Sbjct: 66 LNSTGTRAYTLDATRAVHGDLGSVHPDDVALLLSHSGESEELIRLIAPLKKLAAGVLAIT 125 Query: 214 GFTPNALQQRAS-HCLYTIAEEQ-ATNSASISACHAQGMLTDLLFIALIQQDLELAPE 269 G + L + +Y E N A S+ L D L L++Q A E Sbjct: 126 GSAASTLARAVDAAVVYGPVIEACPLNLAPSSSTTVMLALGDALAFTLVEQRQFTADE 183 >UniRef50_Q9V249 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=3 Tax=Euryarchaeota RepID=GLMS_PYRAB Length = 598 Score = 89.2 bits (220), Expect = 1e-16, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 63/184 (34%), Gaps = 5/184 (2%) Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF +K ++ + + +++ ++ A A E Sbjct: 219 NGFT-VKDIITGKEKRKKVYEIQWTLEMAEKGGYDHFMLKEIFEQPRAVKDAIYGNL--E 275 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA-SSP 179 ++ + +L RII+TG+G S A + + + G V + L + Sbjct: 276 EVPKIAGLLSKYDRIIITGMGTSYHAALVGKYLIQRFGKIPVLVEEASELRYEYEDILDN 335 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 LL+AI+ +G + A G KV+ I + + A LYT A Sbjct: 336 KTLLIAITQSGETADTVAAMKLAKSKGSKVIGIVNVVGSLATRIADATLYTHA-GPEIGV 394 Query: 240 ASIS 243 A+ Sbjct: 395 AATK 398 >UniRef50_C4FAU5 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAU5_9ACTN Length = 646 Score = 89.2 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 43/132 (32%), Gaps = 1/132 (0%) Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA 176 ++L L R+ + G S + AV Sbjct: 314 LDIDELGLTPEELSLVDRVYVIACGTSYHAGLIAKNLIEGWARIPCAVEAASEFRYRNPI 373 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 +P L++A+S +G + A + G KV IT + + + + +YT A + Sbjct: 374 ITPSTLVVAVSQSGETADTLAAIRDARIKGAKVFGITNVVGSPVARESDGVIYTKAN-KE 432 Query: 237 TNSASISACHAQ 248 AS + Q Sbjct: 433 IAVASTKSFTGQ 444 Score = 52.7 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 49/163 (30%), Gaps = 12/163 (7%) Query: 104 KENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG-FNAA 162 E + T +HE R AR + G G ++ A KL ++ +A Sbjct: 478 AEQIQHILDTQR----AAVHEAALACREARSALFVGRGMGSAISCEGALKLKEVSYLHAE 533 Query: 163 AVRDMHALLATVQASSPDDLLLAI-SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQ 221 A + ++A+ + + + E G ++A+ + Sbjct: 534 AYAAGEMKHGPIALIERGFPVIAVATKSPTYDKTVSNLKECEARGACIIAVATEGDEEIT 593 Query: 222 QRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDL 264 + A H +Y + I+A LL + Sbjct: 594 RVADHVIYVP--PVRDALSPITATVP----LQLLAREVAVLRG 630 >UniRef50_Q9YAK0 Uncharacterized protein APE_1940.1 n=23 Tax=Thermoprotei RepID=Y1940_AERPE Length = 212 Score = 89.2 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 42/200 (21%), Positives = 83/200 (41%), Gaps = 27/200 (13%) Query: 101 KLIKENTAAMYATLNVNSEEKLHECVTML----RSARRIILTGIGASGLVAQNFAWKLMK 156 K + E + ++N ++ V L R R++++ G G SGLV + FA +L+ Sbjct: 18 KTMSEIALFIINSINEIDVGQVDRFVGELERVYREKRKVLVMGAGRSGLVGKAFAMRLLH 77 Query: 157 IGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT 216 +GFN+ + + V + DL++AIS +G + + AA+ +VG V AIT + Sbjct: 78 LGFNSYVLGET-----IVPSVREGDLVVAISGSGRTKVIVTAAETAKQVGATVAAITTYP 132 Query: 217 PNALQQRASHCLYTIAEEQATNSASISACH-----------------AQGMLTDLLFIAL 259 + L + + + +++ A + D + +L Sbjct: 133 DSPLGRLSDIVVRVPGRTKSSKMDDYFARQILGIHEPLAPLGTLFEDTTMVFLDGVIYSL 192 Query: 260 IQQDLELAPERIRHSEALVK 279 + + E +R+ A V+ Sbjct: 193 MTRLGID-EEYMRNMHANVE 211 >UniRef50_UPI0001C420F8 glucosamine-fructose-6-phosphate aminotransferase GlmS2 n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C420F8 Length = 594 Score = 89.2 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 78/219 (35%), Gaps = 11/219 (5%) Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE--EKLHE 124 K E + ++ K I E + A+ TLN + E + E Sbjct: 223 KFLDENDQEMTKEIEVIEWSPEMAEKGGYDHFMIKEINEQSTAIKNTLNEKDKVKEIVDE 282 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKI-GFNAAAVRDMHALLATVQASSPDDLL 183 + R++ G S + + + + G + + +A + L+ Sbjct: 283 VKGTI---NRVVFVACGTSYHASLTGKYLIESLVGIPTEVLL-ASEFKYSAKALNDKTLV 338 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + IS +G + A D K LAI ++ +RA + + T A A+ Sbjct: 339 IFISQSGETADTLKALDVANET-SKTLAIVNVRGSSATRRADYVIQTQA-GPEIGVAATK 396 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 +Q + LF AL+ +D E +R+ +++++ Sbjct: 397 TYVSQLVAI-YLFSALLGEDHE-LLKRLEKVPDYIEEVL 433 Score = 41.9 bits (97), Expect = 0.024, Method: Composition-based stats. Identities = 17/113 (15%), Positives = 35/113 (30%), Gaps = 2/113 (1%) Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG-FNAAAVRDMHALLATVQASS 178 +++ E + + G G S +A A KL +I +A + Sbjct: 437 DEIKEISKKYKRDKDAFFIGRGFSYPIALEGALKLKEISYIHAEGYAAGELKHGPIALID 496 Query: 179 PDDLLLAISYTGV-RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT 230 + ++ + G +++ E+ G VL I L + Sbjct: 497 RNIPVVVVIPPGQDHKKIMSNLQEVKARGADVLGIGAVGDEDLISESDDTFLI 549 >UniRef50_C8W8B6 Sugar isomerase (SIS) n=13 Tax=Bacteria RepID=C8W8B6_ATOPD Length = 202 Score = 89.2 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 65/172 (37%), Gaps = 6/172 (3%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR----RIILTGIGASGLVAQNFAWKL 154 ++ + +++ + E L ++ A R+ +TGIG G V+ A Sbjct: 8 VQEFLSIVGKSLHQYVENIDFEALSAAKKLILDAEAKGGRLHVTGIGKPGHVSGYAASLF 67 Query: 155 MKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITG 214 G + + + + P D+++AIS +G EL + VG ++A+TG Sbjct: 68 SSTGTPTYELHGTECVHGSAGQTRPGDVVIAISNSGETGELKATVTCLKNVGVHIIALTG 127 Query: 215 FTPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDL 264 + L A L E + N ++ A+ M L I L + Sbjct: 128 NPNSWLANEAEVALIAGVEQEGDSMNKPPRASILAEIMELQCLSILLQNEYG 179 >UniRef50_Q5HM69 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=65 Tax=Firmicutes RepID=GLMS_STAEQ Length = 601 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 66/212 (31%), Gaps = 8/212 (3%) Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 + + + + V H ++ V ++I+E E +++ Sbjct: 232 RDTYTAEIDAADAEKGVYDHYMLKEIHEQPAVMRRIIQEYQDEKGNLK--IDSEIINDVA 289 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 A RI + G S + K V + + S L + I Sbjct: 290 D----ADRIYIVAAGTSYHAGLVGKEFIEKWAGVPTEVHVASEFVYNMPLLSEKPLFIYI 345 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S +G + E ++G K L IT + L + A H L A AS A Sbjct: 346 SQSGETADSRAVLVETNKLGHKSLTITNVAGSTLSREADHTLLLHA-GPEIAVASTKAYT 404 Query: 247 AQGMLTDLLFIALIQQDLELA-PERIRHSEAL 277 AQ + +L + + + +R + Sbjct: 405 AQIAVLSILSQIVAKNHGRETDVDLLRELAKV 436 >UniRef50_A4INF7 Predicted sugar phosphate aminotransferaseinvolved in capsule formation n=3 Tax=Bacillaceae RepID=A4INF7_GEOTN Length = 183 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 69/183 (37%), Gaps = 13/183 (7%) Query: 103 IKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAA 162 I+ + + + L A+RI + G G SG + + FA +LM +G Sbjct: 5 IEVIFSEIEQVFAEFDHMSIECVAMRLAKAKRIFVAGEGRSGFMGKAFAMRLMHLGATVY 64 Query: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222 AV + + D L+AIS +GV ++ A++ ++G +V+A+T +AL Sbjct: 65 AVGET-----VTPSLQSGDTLIAISGSGVTKQTVWIAEKAKQLGCEVIAVTTDLSSALAN 119 Query: 223 RASHCLYTIAEEQATNSASISACHAQ--------GMLTDLLFIALIQQDLELAPERIRHS 274 AS ++ A + + ++ D + + + + Sbjct: 120 IASLTVHIPAATKYRRGHETQSKQPLGSLFDQCTHLILDAICLQYANNQQVEHQKAFQRH 179 Query: 275 EAL 277 L Sbjct: 180 SNL 182 >UniRef50_B1L7C4 Sugar isomerase (SIS) n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L7C4_KORCO Length = 201 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 36/192 (18%), Positives = 69/192 (35%), Gaps = 26/192 (13%) Query: 107 TAAMYATLNVNSEEKLHECVTMLRSA---RRIILTGIGASGLVAQNFAWKLMKIGFNAAA 163 + L+ +E + + L +I + G G SGLVA+ FA +L+ +GF Sbjct: 14 IEVVKENLSTVDDESANMFIKALFRTMGEGKIFVVGAGRSGLVAKAFAMRLLHVGFQVYV 73 Query: 164 VRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQR 223 V + + DLL+A+S +G + AA VG V+AIT + + L + Sbjct: 74 VGET-----VTPSMRSGDLLIAVSGSGETKFPVTAAQVAKSVGAHVIAITSYPDSTLGKI 128 Query: 224 ASHCLYTIAEEQATNSAS--ISACH----------------AQGMLTDLLFIALIQQDLE 265 A + + + + + + D L +++ + Sbjct: 129 ADFVVRIGGRVLPEDESRDYFTRQILGIHEPLTPLGTLFELSAMIYLDALISEIVELMGK 188 Query: 266 LAPERIRHSEAL 277 + R + Sbjct: 189 SEEDLARRHANI 200 >UniRef50_C3RNG5 Predicted protein n=3 Tax=Bacteria RepID=C3RNG5_9MOLU Length = 250 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 39/272 (14%), Positives = 93/272 (34%), Gaps = 31/272 (11%) Query: 1 MNG-LLRIRQRYQG--LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQK 57 MN + RI G L S + +++ LS +++ ++ +S+ +++F Sbjct: 1 MNLLISRILTYLNGTLLYDSHYRFCKFIVYHYLELEDLSFNEVSEKSQISKEDILRFCAL 60 Query: 58 LGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 LG+ + K L + + + + + +++ K + + + Sbjct: 61 LGFDDYDTFKAELLRSHMIRLDQIRARMLGV-----NSEQLIDEMEKSCSNEVMS----- 110 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 E + + A+R++L G +A F L+ G + Sbjct: 111 --EYISTICEAIFKAKRVVLIGALYPMSIAVEFQTDLVSFGKPVIQYHNFD----KDIQL 164 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGG---KVLAITGFTPNALQQR--ASHCLYTIA 232 +D+ + +S TG +N + + + IT AL + + + + Sbjct: 165 DENDVTIFVSATGRS--MNSFVEIKKELRVDLTTSILITQNKTYALDEYKISDYVIQVPG 222 Query: 233 EEQATNSASISACHAQGMLTDLLFIALIQQDL 264 + + + + + DLL + QQ Sbjct: 223 K---FDGINFNYQI--MTICDLLRVHYYQQYY 249 >UniRef50_C1E1Z8 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E1Z8_9CHLO Length = 702 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 40/217 (18%), Positives = 72/217 (33%), Gaps = 21/217 (9%) Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 K + + + QPES + ++ D T + Sbjct: 334 FKHFMQKEIHEQPESMVQTMRGRMVTCDE----------------GKTAERVFLGGMVNF 377 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 V+ +R +RRIIL G G S A + ++ + +L DD + Sbjct: 378 VSTIRRSRRIILCGCGTSYNSAIAVRQLMEELTELPVTLELASDVLDRQCPFFRDDTCVF 437 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 IS +G + A G + I +A+ + ++ A AS A Sbjct: 438 ISQSGETADTLKAMQYAKERGALCVGIVNTVGSAISRSTDCGVHINA-GAEIGVASTKAY 496 Query: 246 HAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 Q + LL +AL E + R + +++ L+ Sbjct: 497 TCQIVAMVLLALALS----EDSISRATRRKEIMQSLL 529 >UniRef50_C6HYL9 Glucosamine--fructose-6-phosphate aminotransferase, isomerizing n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HYL9_9BACT Length = 616 Score = 88.1 bits (217), Expect = 3e-16, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 41/124 (33%), Gaps = 2/124 (1%) Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP-DD 181 + +L ARR+ + G G S +++ + V P D Sbjct: 286 PKVEAVLARARRLRIVGCGTSYHAGLLGKYRIEDLAGRPVEVEIASEFRYREPLLDPASD 345 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 LL+A++ +G + A G LA+ + + + A L+ A A+ Sbjct: 346 LLVALTQSGETADTLAALRMAREAGVPTLALVNVPGSTIAREADAVLFLEA-GPEFGVAA 404 Query: 242 ISAC 245 Sbjct: 405 TKTF 408 >UniRef50_C9KL97 N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KL97_9FIRM Length = 304 Score = 88.1 bits (217), Expect = 3e-16, Method: Composition-based stats. Identities = 39/235 (16%), Positives = 74/235 (31%), Gaps = 26/235 (11%) Query: 72 EALASQPESPSVPIHNQIRGDDPLR--LVGEKLIKENTAAMYATLNVNSEEKLHECVTML 129 LA P I L + ++ + AA+ L + E L Sbjct: 1 MDLAKLTTERRNPASAHIDSCSTLEMVTIMQQEDSKIAAAIEKILPEI-ARAIDETSQRL 59 Query: 130 RSARRIILTGIGASGLV--------------AQNFAWKLMKIGFNAAA--------VRDM 167 + R+ G G SG + A L+ G A D+ Sbjct: 60 KRGGRLFYLGAGTSGRLGILDASECPPTYGTAPELVQGLIAGGTPAIFRAQEGAEDNPDL 119 Query: 168 HALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHC 227 + D+L+ I+ +G + + +G +A++ + + A Sbjct: 120 AVQDLKEHGFTEKDVLVGIAASGRTPYVIGGLNYAKALGALTIALSCSEHSKIAALADIA 179 Query: 228 L-YTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 L E T S + A AQ ++ ++L + + ++ + +A KKL Sbjct: 180 LTPVTGPEIVTGSTRMKAGTAQKLVLNMLSTGTMIKLGKVYGNLMVDVKASNKKL 234 >UniRef50_A6DIX0 Glucosamine-fructose-6-phosphate aminotransferase n=2 Tax=Bacteria RepID=A6DIX0_9BACT Length = 610 Score = 88.1 bits (217), Expect = 3e-16, Method: Composition-based stats. Identities = 41/269 (15%), Positives = 82/269 (30%), Gaps = 28/269 (10%) Query: 22 ADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESP 81 + ++ D +L+ LA K G F L L + + Sbjct: 198 INAIVQHTDRVVYLNDGDLA------------IVNKEGIS-FHDL--TLKSVQRDEEKIT 242 Query: 82 SVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK-------LHECVTMLRSARR 134 Q G + +++ + A + + LH L S R Sbjct: 243 HSAEEAQKGGFSTF--MMKEIHDQPRAVRNSVRGHLDFDNATTSLGGLHMNPKELASIDR 300 Query: 135 IILTGIGASGLVAQNFAWKLMKI-GFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRR 193 I L G S A + + G V + L +A+S +G Sbjct: 301 IQLFACGTSLNAALLGQYFFEDLVGIPCQ-VTQAADFRYRNPIIEKNTLAIALSQSGETA 359 Query: 194 ELNLAADEMLRVGGKVLAITGFTPNALQQRA--SHCLYTIAEEQATNSASISACHAQGML 251 + A E R G ++AI + + + A L+ E ++ + + + + Sbjct: 360 DTLAAVHEAKRKGADLIAICNAVGSTIAREAGRGVYLHAGPEISVASTKAFTTQVSVLLQ 419 Query: 252 TDLLFIALIQQDLELAPERIRHSEALVKK 280 +L + D A + ++ + L ++ Sbjct: 420 LAILLGRTKRLDRGQAADILKAIDQLPEQ 448 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q8R7I8 Transcriptional regulator n=3 Tax=Firmicutes Rep... 239 9e-62 UniRef50_C7MQM6 Transcriptional regulator, RpiR family n=5 Tax=A... 237 3e-61 UniRef50_C6WFA6 Transcriptional regulator, RpiR family n=2 Tax=A... 235 1e-60 UniRef50_A4F6M8 RpiR-family transcriptional regulator n=7 Tax=Ac... 229 1e-58 UniRef50_C0ZD50 Transcriptional regulator n=32 Tax=Bacillales Re... 227 3e-58 UniRef50_B8E0M8 Transcriptional regulator, RpiR family n=2 Tax=D... 225 1e-57 UniRef50_UPI0001788119 transcriptional regulator, RpiR family n=... 224 3e-57 UniRef50_UPI000196C77F hypothetical protein CATMIT_02718 n=1 Tax... 221 3e-56 UniRef50_C5CIM2 Transcriptional regulator, RpiR family n=1 Tax=K... 221 3e-56 UniRef50_C6Q8T9 Transcriptional regulator, RpiR family n=1 Tax=T... 220 4e-56 UniRef50_A8FJ30 Possible RpiR family transcriptional regulator n... 219 7e-56 UniRef50_C5C2G7 Transcriptional regulator, RpiR family n=1 Tax=B... 218 1e-55 UniRef50_Q1LPJ6 Transcriptional regulator, RpiR family n=6 Tax=B... 218 1e-55 UniRef50_A7GD47 Transcriptional regulator, RpiR family n=10 Tax=... 218 2e-55 UniRef50_C0CSK7 Putative uncharacterized protein n=1 Tax=Blautia... 218 2e-55 UniRef50_B4EZY5 RpiR-family transcriptional regulator n=54 Tax=G... 218 2e-55 UniRef50_Q8RD36 Uncharacterized HTH-type transcriptional regulat... 217 2e-55 UniRef50_A8S9N1 Putative uncharacterized protein n=3 Tax=Bacteri... 217 4e-55 UniRef50_D2AR91 Putative transcriptional regulator, RpiR family ... 216 5e-55 UniRef50_Q97MK5 Uncharacterized HTH-type transcriptional regulat... 216 7e-55 UniRef50_A9KIQ0 Transcriptional regulator, RpiR family n=1 Tax=C... 216 8e-55 UniRef50_A4TMJ1 RpiR-family transcriptional regulatory protein n... 215 9e-55 UniRef50_C4V1J5 RpiR family transcriptional regulator n=1 Tax=Se... 215 1e-54 UniRef50_P44540 Uncharacterized HTH-type transcriptional regulat... 215 1e-54 UniRef50_C4L752 Transcriptional regulator, RpiR family n=4 Tax=B... 215 1e-54 UniRef50_A1HSQ6 Transcriptional regulator, RpiR family n=1 Tax=T... 214 2e-54 UniRef50_A0KFB6 Transcriptional regulator, RpiR family n=3 Tax=G... 214 3e-54 UniRef50_Q4LA29 Similar to transcriptional regulator n=1 Tax=Sta... 214 3e-54 UniRef50_B6ITC5 HTH-type transcriptional regulator hexR, putativ... 212 8e-54 UniRef50_C6XNZ1 Transcriptional regulator, RpiR family n=1 Tax=H... 212 1e-53 UniRef50_A8LV24 Transcriptional regulator, RpiR family n=7 Tax=A... 211 2e-53 UniRef50_C6J4B4 Transcriptional regulator n=1 Tax=Paenibacillus ... 211 2e-53 UniRef50_C0ZJF9 Transcriptional regulator n=1 Tax=Brevibacillus ... 211 3e-53 UniRef50_C4G9W4 Putative uncharacterized protein n=1 Tax=Shuttle... 210 4e-53 UniRef50_C6D7K6 Transcriptional regulator, RpiR family n=1 Tax=P... 210 4e-53 UniRef50_B2TJ91 Transcriptional regulator, RpiR family n=1 Tax=C... 209 7e-53 UniRef50_C2L140 RpiR family transcriptional regulator n=6 Tax=Cl... 209 9e-53 UniRef50_A5L3V2 Transcriptional regulator, RpiR family protein n... 209 9e-53 UniRef50_A9KMQ5 Transcriptional regulator, RpiR family n=1 Tax=C... 208 1e-52 UniRef50_C0Z7S3 Transcriptional regulator n=1 Tax=Brevibacillus ... 207 2e-52 UniRef50_Q1QSE2 Transcriptional regulator, RpiR family n=28 Tax=... 207 2e-52 UniRef50_UPI000197C448 transcriptional regulator n=1 Tax=Provide... 207 3e-52 UniRef50_C4FUK3 Putative uncharacterized protein n=1 Tax=Catonel... 207 4e-52 UniRef50_C6J1X3 RpiR family transcriptional regulator n=2 Tax=Ba... 206 7e-52 UniRef50_C6L9A2 Transcriptional regulator, RpiR family n=1 Tax=B... 206 7e-52 UniRef50_P46118 HTH-type transcriptional regulator hexR n=302 Ta... 206 7e-52 UniRef50_C4KZ09 Transcriptional regulator, RpiR family n=85 Tax=... 206 8e-52 UniRef50_A6LRF3 Transcriptional regulator, RpiR family n=2 Tax=B... 205 9e-52 UniRef50_D1YCB1 Transcriptional regulator, RpiR family n=3 Tax=P... 205 1e-51 UniRef50_C1PDB4 Transcriptional regulator, RpiR family n=1 Tax=B... 205 1e-51 UniRef50_A7VQA6 Putative uncharacterized protein n=1 Tax=Clostri... 205 1e-51 UniRef50_D1ALE3 Transcriptional regulator, RpiR family n=1 Tax=S... 205 1e-51 UniRef50_A9BXM8 Transcriptional regulator, RpiR family n=16 Tax=... 205 2e-51 UniRef50_UPI0001789683 transcriptional regulator, RpiR family n=... 204 2e-51 UniRef50_A8RI47 Putative uncharacterized protein n=1 Tax=Clostri... 204 3e-51 UniRef50_A8FIY5 Possible RpiR family transcriptional regulator n... 204 3e-51 UniRef50_C8NZR0 RpiR family transcriptional regulator n=1 Tax=Er... 204 3e-51 UniRef50_B8KWX3 Bifunctional protein glk n=3 Tax=unclassified Ga... 204 4e-51 UniRef50_C0D6A5 Putative uncharacterized protein n=1 Tax=Clostri... 203 4e-51 UniRef50_C2D8M2 Possible transcriptional regulator n=1 Tax=Atopo... 203 5e-51 UniRef50_A8RRF4 Putative uncharacterized protein n=5 Tax=Clostri... 203 5e-51 UniRef50_A6LUR0 Transcriptional regulator, RpiR family n=2 Tax=C... 203 6e-51 UniRef50_B0N1V0 Putative uncharacterized protein n=2 Tax=Bacteri... 202 1e-50 UniRef50_C2D3P4 RpiR family transcriptional regulator (Fragment)... 202 1e-50 UniRef50_Q02VU4 Transcriptional regulator n=4 Tax=Lactococcus la... 202 1e-50 UniRef50_Q9CKN4 Putative uncharacterized protein n=1 Tax=Pasteur... 202 1e-50 UniRef50_C9AZQ1 Phosphosugar isomerase transcriptional regulator... 202 1e-50 UniRef50_A8RWE9 Putative uncharacterized protein n=1 Tax=Clostri... 202 1e-50 UniRef50_B6GA31 Putative uncharacterized protein n=1 Tax=Collins... 201 3e-50 UniRef50_Q04DU1 Transcriptional regulator n=2 Tax=Oenococcus oen... 200 3e-50 UniRef50_A8F3D9 Transcriptional regulator, RpiR family n=1 Tax=T... 200 3e-50 UniRef50_C2JLW7 Bifunctional RpiR family transcriptional regulat... 200 4e-50 UniRef50_C4DDH7 Transcriptional regulator, RpiR family n=1 Tax=S... 200 4e-50 UniRef50_A6LVH8 Transcriptional regulator, RpiR family n=8 Tax=F... 200 4e-50 UniRef50_B5I8T9 Sugar isomerase n=1 Tax=Streptomyces sviceus ATC... 200 5e-50 UniRef50_C3RKW6 Sugar isomerase n=3 Tax=Bacteria RepID=C3RKW6_9MOLU 199 7e-50 UniRef50_Q184N2 Putative phosphosugar-binding transcriptional re... 199 9e-50 UniRef50_D1AUV3 Transcriptional regulator, RpiR family n=5 Tax=B... 198 1e-49 UniRef50_Q3JNN8 Transcriptional regulator, RpiR family n=54 Tax=... 198 2e-49 UniRef50_A6UCC0 Transcriptional regulator, RpiR family n=4 Tax=P... 198 2e-49 UniRef50_C2D9S0 RpiR family transcriptional regulator n=1 Tax=At... 198 2e-49 UniRef50_B1YJ20 Transcriptional regulator, RpiR family n=1 Tax=E... 197 2e-49 UniRef50_A4VXR0 Transcriptional regulator n=5 Tax=Streptococcus ... 197 3e-49 UniRef50_C3WE65 Transcriptional regulator n=5 Tax=Fusobacterium ... 197 4e-49 UniRef50_C1I531 Transcriptional regulator n=1 Tax=Clostridium sp... 197 4e-49 UniRef50_UPI0001693BD8 YbbH n=1 Tax=Paenibacillus larvae subsp. ... 197 4e-49 UniRef50_P26833 Uncharacterized HTH-type transcriptional regulat... 197 5e-49 UniRef50_A9BH25 Transcriptional regulator, RpiR family n=1 Tax=P... 197 5e-49 UniRef50_C8W838 Transcriptional regulator, RpiR family n=1 Tax=A... 197 5e-49 UniRef50_Q9K6Z8 Transcriptional regulator (Hex regulon repressor... 196 7e-49 UniRef50_P37767 Uncharacterized HTH-type transcriptional regulat... 196 8e-49 UniRef50_A9M040 RpiR/YebK/YfhH family transcriptional regulator ... 196 8e-49 UniRef50_C8NHI8 Probable transcriptional regulator YbbH n=1 Tax=... 195 1e-48 UniRef50_D0DKU0 Transcriptional regulator n=1 Tax=Lactobacillus ... 195 1e-48 UniRef50_A1AYM0 Transcriptional regulator, RpiR family n=3 Tax=P... 195 1e-48 UniRef50_C0D4M2 Putative uncharacterized protein n=1 Tax=Clostri... 195 2e-48 UniRef50_D1AG49 Transcriptional regulator, RpiR family n=1 Tax=S... 195 2e-48 UniRef50_C5CG85 Transcriptional regulator, RpiR family n=1 Tax=K... 194 2e-48 UniRef50_Q45581 Uncharacterized HTH-type transcriptional regulat... 194 2e-48 UniRef50_Q13K65 Transcriptional regulator, RpiR family n=7 Tax=B... 194 3e-48 UniRef50_D0W145 Transcriptional regulator HexR n=3 Tax=Neisseria... 194 3e-48 UniRef50_C1XRD4 Transcriptional regulator n=1 Tax=Meiothermus si... 194 3e-48 UniRef50_C4L7F8 Transcriptional regulator, RpiR family n=2 Tax=G... 194 3e-48 UniRef50_Q9WYG1 Uncharacterized HTH-type transcriptional regulat... 193 5e-48 UniRef50_D0GPL3 Transcriptional regulator, RpiR family n=1 Tax=L... 192 8e-48 UniRef50_B9K581 Transcriptional repressor of rpiB expression; tr... 192 9e-48 UniRef50_B1QW74 Transcriptional regulator n=2 Tax=Clostridium bu... 192 1e-47 UniRef50_B7RYI4 Transcriptional regulator, RpiR family protein n... 192 1e-47 UniRef50_A0JVW9 Transcriptional regulator, RpiR family n=2 Tax=A... 192 1e-47 UniRef50_C3RM33 Sugar isomerase n=2 Tax=Bacteria RepID=C3RM33_9MOLU 192 1e-47 UniRef50_Q2G836 Transcriptional regulator, RpiR family n=4 Tax=P... 192 1e-47 UniRef50_C8JWL0 Phosphosugar-binding transcriptional regulator n... 192 2e-47 UniRef50_B7GUA9 Transcriptional regulator, RpiR family n=7 Tax=B... 192 2e-47 UniRef50_A9MIE1 HTH-type transcriptional regulator murR n=48 Tax... 192 2e-47 UniRef50_UPI000196C511 hypothetical protein CATMIT_02677 n=1 Tax... 191 2e-47 UniRef50_C3JIB3 RpiR-family transcriptional regulator n=2 Tax=Rh... 191 2e-47 UniRef50_A1JQZ2 RpiR family regulatory protein n=12 Tax=Enteroba... 191 3e-47 UniRef50_Q2SNY6 Transcriptional regulator n=1 Tax=Hahella chejue... 191 3e-47 UniRef50_A6T0F7 Transcriptional regulator, RpiR family n=2 Tax=O... 190 3e-47 UniRef50_Q7MD38 Transcriptional regulator n=31 Tax=Gammaproteoba... 190 3e-47 UniRef50_A0AJB4 Complete genome n=7 Tax=Bacillales RepID=A0AJB4_... 190 3e-47 UniRef50_Q040R4 Transcriptional regulator n=8 Tax=Lactobacillus ... 190 4e-47 UniRef50_Q38YX9 Gluconate operon transcriptional regulator, RpiR... 190 4e-47 UniRef50_C1PED1 Transcriptional regulator, RpiR family n=1 Tax=B... 190 5e-47 UniRef50_B5HLI6 RpiR-family transcriptional regulator n=3 Tax=St... 190 6e-47 UniRef50_B9CM70 Transcriptional regulator, RpiR family n=1 Tax=A... 189 7e-47 UniRef50_C2C2H3 Bifunctional RpiR family transcriptional regulat... 189 8e-47 UniRef50_D2PUN7 Transcriptional regulator, RpiR family n=1 Tax=K... 189 8e-47 UniRef50_Q03HR4 Transcriptional regulator, RpiR family n=2 Tax=P... 189 9e-47 UniRef50_A9NEV7 Transcriptional regulator, RpiR family n=1 Tax=A... 189 1e-46 UniRef50_A1BB20 Transcriptional regulator, RpiR family n=1 Tax=P... 189 1e-46 UniRef50_Q6AH41 Transcriptional regulator, RpiR family n=1 Tax=L... 189 1e-46 UniRef50_C6JFM8 Transcriptional regulator n=2 Tax=Clostridiales ... 189 1e-46 UniRef50_A4EAC5 Putative uncharacterized protein n=2 Tax=Collins... 189 1e-46 UniRef50_B6G0W9 Putative uncharacterized protein n=1 Tax=Clostri... 189 1e-46 UniRef50_Q03YQ8 Transcriptional regulator n=4 Tax=Leuconostocace... 189 1e-46 UniRef50_Q03Q61 Transcriptional regulator n=1 Tax=Lactobacillus ... 188 2e-46 UniRef50_C2HLD1 Transcriptional regulator n=3 Tax=Lactobacillus ... 188 2e-46 UniRef50_C0CU66 Putative uncharacterized protein n=2 Tax=Clostri... 188 2e-46 UniRef50_A5EB66 Transcriptional regulator, RpiR family n=1 Tax=B... 187 3e-46 UniRef50_C8SX74 Transcriptional regulator, RpiR family n=1 Tax=M... 187 3e-46 UniRef50_C1IBM1 Phosphosugar-binding transcriptional regulator n... 187 4e-46 UniRef50_C0R285 Transcriptional regulator n=1 Tax=Brachyspira hy... 187 4e-46 UniRef50_A0Z4E2 Transcriptional regulator n=3 Tax=Bacteria RepID... 187 4e-46 UniRef50_C7REF2 Transcriptional regulator, RpiR family n=2 Tax=A... 187 4e-46 UniRef50_A8UBX8 Phosphosugar-binding transcriptional regulator, ... 187 4e-46 UniRef50_C0X1P6 Transcriptional regulator RpiR n=21 Tax=Enteroco... 187 5e-46 UniRef50_D0KLH9 Transcriptional regulator, RpiR family n=1 Tax=P... 186 6e-46 UniRef50_B5FDJ7 Transcriptional regulator, RpiR family protein n... 186 7e-46 UniRef50_B7RLA4 Transcriptional regulator, RpiR family n=1 Tax=R... 186 8e-46 UniRef50_Q0BBX6 Transcriptional regulator, RpiR family n=65 Tax=... 186 9e-46 UniRef50_B1R0U2 Transcriptional regulator, RpiR family n=9 Tax=F... 185 1e-45 UniRef50_Q2JBJ8 Transcriptional regulator, RpiR family n=1 Tax=F... 185 1e-45 UniRef50_A4WDW6 Transcriptional regulator n=10 Tax=Enterobacteri... 185 1e-45 UniRef50_Q1WQV4 Transcriptional regulator, RpiR family n=4 Tax=L... 185 1e-45 UniRef50_Q2J8J9 Transcriptional regulator, RpiR family n=1 Tax=F... 185 1e-45 UniRef50_A6LRG7 Transcriptional regulator, RpiR family n=2 Tax=F... 185 2e-45 UniRef50_A9MLD6 Putative uncharacterized protein n=1 Tax=Salmone... 185 2e-45 UniRef50_B9YAK0 Putative uncharacterized protein n=1 Tax=Holdema... 184 2e-45 UniRef50_B5GNW3 RpiR-family transcriptional regulator n=14 Tax=S... 184 2e-45 UniRef50_C9L6X6 Transcriptional regulator, RpiR family n=1 Tax=B... 184 3e-45 UniRef50_A8SDH7 Putative uncharacterized protein n=1 Tax=Faecali... 184 3e-45 UniRef50_B9NXN7 Bifunctional protein glk n=2 Tax=Rhodobacteracea... 184 3e-45 UniRef50_C2D9G3 RpiR family transcriptional regulator n=1 Tax=At... 184 4e-45 UniRef50_Q03CT7 Transcriptional regulator n=7 Tax=Lactobacillus ... 184 4e-45 UniRef50_A8RZI5 Putative uncharacterized protein n=1 Tax=Clostri... 183 6e-45 UniRef50_B0NYS8 Putative uncharacterized protein n=2 Tax=Clostri... 183 6e-45 UniRef50_UPI00017F2FF2 transcriptional regulator n=1 Tax=Escheri... 183 7e-45 UniRef50_Q71VW8 Phosphosugar-binding transcriptional regulator, ... 183 7e-45 UniRef50_C6VNS3 Transcription regulator n=3 Tax=Lactobacillus pl... 183 8e-45 UniRef50_Q03CI3 Transcriptional regulator n=10 Tax=Lactobacillac... 182 8e-45 UniRef50_D0XGH5 Putative uncharacterized protein n=1 Tax=Vibrio ... 182 8e-45 UniRef50_D2AGN5 Transcriptional regulator, RpiR family n=1 Tax=S... 182 8e-45 UniRef50_A2RL41 Transcriptional regulator, RpiR family n=4 Tax=L... 182 1e-44 UniRef50_A3DDB2 Transcriptional regulator, RpiR family n=5 Tax=C... 182 1e-44 UniRef50_C5BVH6 Transcriptional regulator, RpiR family n=2 Tax=A... 182 1e-44 UniRef50_C5C1Y9 Transcriptional regulator, RpiR family n=1 Tax=B... 182 2e-44 UniRef50_D0I0X8 Sialic acid utilization regulator RpiR family n=... 181 2e-44 UniRef50_C4FU45 Putative uncharacterized protein n=1 Tax=Catonel... 181 3e-44 UniRef50_B9DJX2 Putative RpiR family transcriptional regulator n... 180 4e-44 UniRef50_A8UCF6 Phosphosugar-binding transcriptional regulator, ... 180 4e-44 UniRef50_D1AYR1 Transcriptional regulator, RpiR family n=2 Tax=F... 180 4e-44 UniRef50_C0X148 RpiR family transcriptional regulator n=22 Tax=E... 180 4e-44 UniRef50_A6UIG8 Transcriptional regulator, RpiR family n=8 Tax=R... 180 4e-44 UniRef50_UPI0001BCD92E RpiR family transcriptional regulator n=1... 180 4e-44 UniRef50_C6B6F5 Transcriptional regulator, RpiR family n=7 Tax=A... 180 5e-44 UniRef50_D2BPE4 Transcriptional regulator, RpiR family n=1 Tax=L... 180 5e-44 UniRef50_Q28KP3 Transcriptional regulator, RpiR family n=6 Tax=A... 180 5e-44 UniRef50_D1AK74 Transcriptional regulator, RpiR family n=1 Tax=S... 180 5e-44 UniRef50_C2H8J8 Bifunctional RpiR family transcriptional regulat... 180 6e-44 UniRef50_B7LQI9 Transcriptional regulator n=32 Tax=Gammaproteoba... 179 7e-44 UniRef50_C2KD15 RpiR family transcriptional regulator n=3 Tax=La... 179 8e-44 UniRef50_UPI000197BCAC RpiR family transcriptional regulator n=1... 179 8e-44 UniRef50_A8RDU7 Putative uncharacterized protein n=1 Tax=Eubacte... 179 9e-44 UniRef50_Q02YU6 Transcriptional regulator n=4 Tax=Lactobacillale... 179 1e-43 UniRef50_UPI00016A71F3 transcriptional regulator, RpiR family pr... 179 1e-43 UniRef50_B7X566 Transcriptional regulator, RpiR family n=1 Tax=C... 179 1e-43 UniRef50_D0R5V5 Transcriptional regulator n=10 Tax=Lactobacillus... 179 1e-43 UniRef50_C9A459 Phosphosugar isomerase transcriptional regulator... 178 2e-43 UniRef50_C0C246 Putative uncharacterized protein n=2 Tax=Clostri... 178 2e-43 UniRef50_C0X6G8 RpiR family transcriptional regulator n=23 Tax=E... 178 2e-43 UniRef50_C8P0W4 RpiR family phosphosugar-binding transcriptional... 178 2e-43 UniRef50_B7CB00 Putative uncharacterized protein n=1 Tax=Eubacte... 178 2e-43 UniRef50_C5D4L1 Transcriptional regulator, RpiR family n=1 Tax=G... 177 3e-43 UniRef50_D1PSB4 Transcriptional regulator n=3 Tax=Clostridiales ... 177 3e-43 UniRef50_C6J2D0 Transcription regulator n=1 Tax=Paenibacillus sp... 177 3e-43 UniRef50_C3RHU3 Transcriptional regulator n=2 Tax=Bacteria RepID... 177 3e-43 UniRef50_A6D304 DNA-binding transcriptional repressor RpiR n=1 T... 177 4e-43 UniRef50_B7C842 Putative uncharacterized protein n=1 Tax=Eubacte... 177 4e-43 UniRef50_C6VMT8 Transcription regulator n=3 Tax=Lactobacillus pl... 177 4e-43 UniRef50_P0ACS8 HTH-type transcriptional regulator rpiR n=34 Tax... 177 4e-43 UniRef50_P46117 Uncharacterized HTH-type transcriptional regulat... 177 5e-43 UniRef50_C3RHA3 Transcriptional regulator n=3 Tax=Bacteria RepID... 176 6e-43 UniRef50_C7XVK6 6-phospho 3-hexuloisomerase n=1 Tax=Lactobacillu... 176 1e-42 UniRef50_B6GAC9 Putative uncharacterized protein n=1 Tax=Collins... 175 1e-42 UniRef50_B7UNF1 Predicted transcriptional regulator, RpiR family... 175 1e-42 UniRef50_D2ELR8 Transcription regulator n=1 Tax=Pediococcus acid... 175 1e-42 UniRef50_C7HWK5 RpiR family phosphosugar-binding transcriptional... 175 1e-42 UniRef50_D0RS60 RpiR family transcriptional regulator n=2 Tax=La... 175 1e-42 UniRef50_Q38V38 Putative transcriptional regulator with a sugari... 175 1e-42 UniRef50_Q1GCY7 Transcriptional regulator, RpiR family n=2 Tax=R... 175 2e-42 UniRef50_Q03FC5 Transcriptional regulator n=1 Tax=Pediococcus pe... 174 2e-42 UniRef50_D1TJG3 Putative transcriptional regulator, RpiR family ... 174 3e-42 UniRef50_C5EPZ9 Transcriptional regulator n=2 Tax=Clostridiales ... 174 3e-42 UniRef50_Q1J2N3 Transcriptional regulator, RpiR family n=2 Tax=D... 174 3e-42 UniRef50_C0C5Q9 Putative uncharacterized protein n=1 Tax=Clostri... 174 3e-42 UniRef50_Q15N75 Transcriptional regulator, RpiR family n=1 Tax=P... 174 5e-42 UniRef50_B2UK47 Transcriptional regulator, RpiR family n=5 Tax=R... 173 5e-42 UniRef50_A1HTD9 Transcriptional regulator, RpiR family n=1 Tax=T... 172 9e-42 UniRef50_C2C459 RpiR family transcriptional regulator n=1 Tax=Li... 172 9e-42 UniRef50_A8RCR9 Putative uncharacterized protein n=1 Tax=Eubacte... 172 1e-41 UniRef50_B9Y3J7 Putative uncharacterized protein n=1 Tax=Holdema... 172 1e-41 UniRef50_B9E8A7 Putative uncharacterized protein n=1 Tax=Macroco... 172 1e-41 UniRef50_B1Y2D5 Glucokinase n=1 Tax=Leptothrix cholodnii SP-6 Re... 172 2e-41 UniRef50_C0X0S9 RpiR family transcriptional regulator n=22 Tax=E... 172 2e-41 UniRef50_B0NJ36 Putative uncharacterized protein n=1 Tax=Clostri... 171 2e-41 UniRef50_Q5WK55 RpiR family transcriptional regulator n=1 Tax=Ba... 171 2e-41 UniRef50_A8UCF8 Phosphosugar-binding transcriptional regulator, ... 171 2e-41 UniRef50_B9Y4T6 Putative uncharacterized protein n=2 Tax=Holdema... 171 2e-41 UniRef50_UPI00016945F6 hypothetical protein Plarl_13824 n=1 Tax=... 171 2e-41 UniRef50_A9BEU1 Transcriptional regulator, RpiR family n=1 Tax=P... 171 3e-41 UniRef50_C4KYQ0 Transcriptional regulator, RpiR family n=1 Tax=E... 171 3e-41 UniRef50_Q041H9 Transcriptional regulator n=22 Tax=Lactobacillus... 170 4e-41 UniRef50_C3RI81 Sugar isomerase n=1 Tax=Mollicutes bacterium D7 ... 170 4e-41 UniRef50_C9XPJ9 RpiR-family transcriptional regulator n=5 Tax=Cl... 170 4e-41 UniRef50_C0XD02 RpiR family transcriptional regulator n=1 Tax=La... 170 5e-41 UniRef50_B7IEI4 Transcriptional regulator, RpiR family n=1 Tax=T... 170 5e-41 UniRef50_A6UGP6 Transcriptional regulator, RpiR family n=1 Tax=S... 170 5e-41 UniRef50_A4E6N7 Putative uncharacterized protein n=1 Tax=Collins... 169 8e-41 UniRef50_A8U5E8 Putative uncharacterized protein n=1 Tax=Carnoba... 169 9e-41 UniRef50_A9IGF4 Transcriptional regulator, RpiR family n=10 Tax=... 169 1e-40 UniRef50_C2KAY2 Transcriptional regulator n=6 Tax=Lactobacillus ... 169 1e-40 UniRef50_Q03HW7 Transcriptional regulator n=13 Tax=Lactobacillal... 169 1e-40 UniRef50_A8S4W0 Putative uncharacterized protein n=1 Tax=Clostri... 169 1e-40 UniRef50_Q1J381 Transcriptional regulator, RpiR family n=1 Tax=D... 168 2e-40 UniRef50_UPI000196B715 hypothetical protein CATMIT_00151 n=1 Tax... 168 2e-40 UniRef50_UPI00019054B9 hypothetical protein RetlB5_21050 n=1 Tax... 168 2e-40 UniRef50_C2L0R5 Possible transcriptional regulator RpiR n=1 Tax=... 167 4e-40 UniRef50_C7T7Y4 Transcriptional regulator n=8 Tax=Lactobacillus ... 167 4e-40 UniRef50_C4F999 Putative uncharacterized protein n=1 Tax=Collins... 167 5e-40 UniRef50_A9WVK2 Transcriptional regulator, RpiR family n=2 Tax=M... 167 5e-40 UniRef50_C9A857 Transcription regulator n=3 Tax=Enterococcus cas... 167 5e-40 UniRef50_Q1YGT9 Putative transcriptional regulator, RpiR family ... 167 5e-40 UniRef50_A5VV40 Transcriptional regulator, RpiR family n=37 Tax=... 167 6e-40 UniRef50_C9S176 Transcriptional regulator, RpiR family n=2 Tax=G... 166 7e-40 UniRef50_C2EDG2 RpiR family transcriptional regulator n=1 Tax=La... 166 7e-40 UniRef50_D1C9F1 Transcriptional regulator, RpiR family n=1 Tax=S... 166 8e-40 UniRef50_C2LK66 Phosphosugar-binding transcriptional regulator n... 166 9e-40 UniRef50_C0D858 Putative uncharacterized protein n=1 Tax=Clostri... 166 9e-40 UniRef50_C8ZYC7 Sugar isomerase n=4 Tax=Enterococcus RepID=C8ZYC... 165 1e-39 UniRef50_B9B6B2 Transcriptional regulator, RpiR family n=3 Tax=B... 165 1e-39 UniRef50_Q4L9T6 Similar to transcriptional regulator n=2 Tax=Sta... 165 2e-39 UniRef50_A5IPI4 Transcriptional regulator, RpiR family n=54 Tax=... 165 2e-39 UniRef50_C3WAG5 Transcriptional regulator n=1 Tax=Fusobacterium ... 165 2e-39 UniRef50_C3RM35 Transcriptional regulator n=2 Tax=Bacteria RepID... 164 2e-39 UniRef50_Q0STT6 Transcriptional regulator, RpiR family n=14 Tax=... 164 3e-39 UniRef50_B4SHK0 Transcriptional regulator, RpiR family n=3 Tax=S... 164 3e-39 UniRef50_C3WA33 Transcriptional regulator n=3 Tax=Fusobacterium ... 164 3e-39 UniRef50_B1QVU2 Transcriptional regulator, RpiR family n=9 Tax=C... 164 3e-39 UniRef50_A4CAD1 Transcriptional regulator n=1 Tax=Pseudoalteromo... 163 5e-39 UniRef50_Q71W74 Phosphosugar-binding transcriptional regulator, ... 163 5e-39 UniRef50_B0NFU9 Putative uncharacterized protein n=2 Tax=Clostri... 163 6e-39 UniRef50_B0MBA6 Putative uncharacterized protein n=2 Tax=Clostri... 163 6e-39 UniRef50_C7TGD6 Transcriptional regulator, RpiR family n=3 Tax=L... 163 6e-39 UniRef50_Q9K8R3 BH2940 protein n=4 Tax=Bacillus RepID=Q9K8R3_BACHD 163 7e-39 UniRef50_Q8RAK1 Transcriptional regulator n=1 Tax=Thermoanaeroba... 163 8e-39 UniRef50_C7NDE7 Transcriptional regulator, RpiR family n=2 Tax=L... 163 8e-39 UniRef50_C8STB5 Transcriptional regulator, RpiR family n=1 Tax=M... 163 8e-39 UniRef50_UPI0001BC58DB RpiR family transcriptional regulator n=1... 162 9e-39 UniRef50_A5IV96 Transcriptional regulator, RpiR family n=113 Tax... 162 9e-39 UniRef50_C8N6B7 RpiR family phosphosugar-binding transcriptional... 162 1e-38 UniRef50_C4Z5R8 N-acylmannosamine kinase n=1 Tax=Eubacterium eli... 162 1e-38 UniRef50_UPI000169311A hypothetical protein Plarl_08670 n=1 Tax=... 162 1e-38 UniRef50_C3RHU4 Transcriptional regulator n=2 Tax=Bacteria RepID... 162 1e-38 UniRef50_A6W619 Transcriptional regulator, RpiR family n=1 Tax=K... 162 1e-38 UniRef50_A6BIK8 Putative uncharacterized protein n=9 Tax=Clostri... 162 2e-38 UniRef50_A8FIJ8 RpiR family transcriptional regulator n=2 Tax=Ba... 162 2e-38 UniRef50_A1WRM9 Transcriptional regulator, RpiR family n=2 Tax=C... 161 2e-38 UniRef50_C0ZHI7 Transcriptional regulator n=1 Tax=Brevibacillus ... 161 3e-38 UniRef50_C0C1I3 Putative uncharacterized protein n=1 Tax=Clostri... 161 3e-38 UniRef50_C8QBF9 Transcriptional regulator, RpiR family n=1 Tax=P... 160 4e-38 UniRef50_C7CRC1 Predicted protein n=24 Tax=Enterococcus RepID=C7... 160 4e-38 UniRef50_C3RR03 Sugar isomerase n=2 Tax=Bacteria RepID=C3RR03_9MOLU 160 4e-38 UniRef50_A6M3B1 Transcriptional regulator, RpiR family n=1 Tax=C... 160 4e-38 UniRef50_UPI000196B4B9 hypothetical protein CATMIT_00397 n=1 Tax... 160 5e-38 UniRef50_C3RM54 Putative uncharacterized protein n=2 Tax=Bacteri... 160 5e-38 UniRef50_C0BYY2 Putative uncharacterized protein n=1 Tax=Clostri... 160 5e-38 UniRef50_D0KI21 Transcriptional regulator, RpiR family n=84 Tax=... 160 6e-38 UniRef50_B9DT48 RpiR family regulatory protein n=1 Tax=Streptoco... 160 6e-38 UniRef50_C0Q155 Protein rpiR n=2 Tax=Salmonella enterica RepID=C... 160 6e-38 UniRef50_C3RKL9 Sugar isomerase n=3 Tax=Bacteria RepID=C3RKL9_9MOLU 160 7e-38 UniRef50_C9Q9L7 Helix-turn-helix protein RpiR n=6 Tax=Vibrio Rep... 160 7e-38 UniRef50_C2MLM8 Transcriptional regulator n=1 Tax=Bacillus cereu... 159 7e-38 UniRef50_A6DTP0 Putative transcriptional regulator, rpiR family ... 159 8e-38 UniRef50_Q89XK4 Transcriptional regulatory protein n=1 Tax=Brady... 159 9e-38 UniRef50_B0N5H7 Putative uncharacterized protein n=1 Tax=Clostri... 159 9e-38 UniRef50_B1Q8U9 Putative phosphosugar-binding transcriptional re... 159 1e-37 UniRef50_B2UF98 Transcriptional regulator, RpiR family n=2 Tax=R... 159 1e-37 UniRef50_B9DVM9 RpiR family regulatory protein n=2 Tax=Streptoco... 159 1e-37 UniRef50_C6JFN2 Transcriptional regulator n=3 Tax=Clostridiales ... 159 1e-37 UniRef50_B2IRS9 Phosphosugar-binding transcriptional regulator, ... 158 1e-37 UniRef50_C0EW96 Putative uncharacterized protein n=1 Tax=Eubacte... 158 1e-37 UniRef50_C8NE33 RpiR family phosphosugar-binding transcriptional... 158 2e-37 UniRef50_UPI0001C36367 transcriptional regulator, RpiR family pr... 158 2e-37 UniRef50_UPI0001BC57B3 oxygen-independent coproporphyrinogen III... 158 2e-37 UniRef50_Q21ZX8 Transcriptional regulator, RpiR family n=4 Tax=C... 158 2e-37 UniRef50_C3RJC3 Sugar isomerase n=5 Tax=Bacteria RepID=C3RJC3_9MOLU 158 2e-37 UniRef50_A0ZNS9 Putative uncharacterized protein n=3 Tax=Photoba... 157 3e-37 UniRef50_A4XR90 Transcriptional regulator, RpiR family n=2 Tax=P... 157 4e-37 UniRef50_B3EUN5 Transcriptional regulator, RpiR family n=1 Tax=B... 157 4e-37 UniRef50_A6M2X4 Transcriptional regulator, RpiR family n=4 Tax=C... 157 5e-37 UniRef50_D1BBP1 Transcriptional regulator n=2 Tax=Micrococcineae... 157 5e-37 UniRef50_A8F424 Transcriptional regulator, RpiR family n=1 Tax=T... 157 5e-37 UniRef50_C0DAS9 Putative uncharacterized protein n=1 Tax=Clostri... 157 5e-37 UniRef50_A3IB77 Transcriptional regulator n=1 Tax=Bacillus sp. B... 157 6e-37 UniRef50_C9M9W1 Transcriptional regulator, RpiR family n=1 Tax=J... 157 6e-37 UniRef50_A0YBK7 Transcriptional regulator n=1 Tax=marine gamma p... 157 6e-37 UniRef50_B1M7S3 Transcriptional regulator, RpiR family n=1 Tax=M... 156 6e-37 UniRef50_B7GSI0 Transcriptional regulator, RpiR family n=1 Tax=B... 156 6e-37 UniRef50_C2APV8 Transcriptional regulator n=1 Tax=Tsukamurella p... 156 6e-37 UniRef50_B2TKZ2 RpiR-family transcriptional regulator n=49 Tax=B... 156 7e-37 UniRef50_UPI0001B56E76 RpiR family transcriptional regulator n=1... 156 7e-37 UniRef50_B1KTP2 Transcriptional regulator, RpiR family n=10 Tax=... 156 8e-37 UniRef50_Q88UA4 Transcription regulator n=1 Tax=Lactobacillus pl... 156 8e-37 UniRef50_C9KLC1 Transcriptional regulator, RpiR family n=1 Tax=M... 156 9e-37 UniRef50_A5KIQ4 Putative uncharacterized protein n=2 Tax=Ruminoc... 156 9e-37 UniRef50_UPI0001C42AD8 transcriptional regulator n=1 Tax=Bacillu... 156 9e-37 UniRef50_A6LTU2 Transcriptional regulator, RpiR family n=3 Tax=C... 156 1e-36 UniRef50_A8F3C1 Transcriptional regulator, RpiR family n=7 Tax=T... 155 1e-36 UniRef50_C2HCM3 RpiR family transcriptional regulator n=12 Tax=E... 155 1e-36 UniRef50_A4IT25 Transcriptional regulator n=5 Tax=Bacillaceae Re... 155 1e-36 UniRef50_C5BXN6 Transcriptional regulator, RpiR family n=1 Tax=B... 155 1e-36 UniRef50_C3FD32 Phosphosugar-binding transcriptional regulator n... 155 2e-36 UniRef50_C4Z9F6 N-acetylmannosamine kinase n=4 Tax=Clostridiales... 155 2e-36 UniRef50_C8P486 Transcription regulator n=1 Tax=Lactobacillus an... 155 2e-36 UniRef50_A3X377 SIS domain protein n=5 Tax=Rhodobacteraceae RepI... 155 2e-36 UniRef50_A6LS27 Transcriptional regulator, RpiR family n=1 Tax=C... 155 2e-36 UniRef50_C8Q2X6 Transcriptional regulator, RpiR family n=1 Tax=P... 154 3e-36 UniRef50_C5EP47 Transcriptional regulator n=2 Tax=Clostridiales ... 154 3e-36 UniRef50_C1B8E5 Putative RpiR family transcriptional regulator n... 154 3e-36 UniRef50_A4WSY4 Transcriptional regulator, RpiR family n=19 Tax=... 153 4e-36 UniRef50_A5KNM9 Putative uncharacterized protein n=1 Tax=Ruminoc... 153 4e-36 UniRef50_C5RF15 Transcriptional regulator, RpiR family n=1 Tax=C... 153 5e-36 UniRef50_B0PG82 Putative uncharacterized protein n=1 Tax=Anaerot... 153 5e-36 UniRef50_D2AU61 Putative transcriptional regulator, RpiR family ... 153 6e-36 UniRef50_C9RVZ8 Transcriptional regulator, RpiR family n=5 Tax=B... 153 6e-36 UniRef50_D1AP79 Transcriptional regulator, RpiR family n=1 Tax=S... 153 7e-36 UniRef50_Q46ZY9 Transcriptional regulator, RpiR family n=74 Tax=... 153 7e-36 UniRef50_A9H555 Putative uncharacterized protein n=1 Tax=Roseoba... 153 7e-36 UniRef50_B9R568 SIS domain protein n=2 Tax=Labrenzia RepID=B9R56... 153 8e-36 UniRef50_C6JLG4 Predicted protein n=2 Tax=Fusobacterium RepID=C6... 152 1e-35 UniRef50_A1BAR1 Transcriptional regulator, RpiR family n=1 Tax=P... 152 1e-35 UniRef50_D2PSH8 Transcriptional regulator, RpiR family n=1 Tax=K... 152 1e-35 UniRef50_UPI000196C8C2 hypothetical protein CATMIT_03055 n=1 Tax... 152 1e-35 UniRef50_C3RH23 Predicted protein n=2 Tax=Bacteria RepID=C3RH23_... 152 2e-35 UniRef50_C0CJY4 Putative uncharacterized protein n=1 Tax=Blautia... 152 2e-35 UniRef50_C0ZE98 Transcriptional regulator n=1 Tax=Brevibacillus ... 152 2e-35 UniRef50_C5CD76 Transcriptional regulator, RpiR family n=1 Tax=K... 151 2e-35 UniRef50_B4BI96 Transcriptional regulator, RpiR family n=1 Tax=G... 151 2e-35 UniRef50_Q2BFK6 Probable glucose kinase n=3 Tax=Firmicutes RepID... 151 3e-35 UniRef50_A1WPP9 Transcriptional regulator, RpiR family n=1 Tax=V... 151 3e-35 UniRef50_C1DL90 Sugar isomerase (SIS) n=48 Tax=Proteobacteria Re... 151 3e-35 UniRef50_A6VVN8 Transcriptional regulator, RpiR family n=1 Tax=M... 151 3e-35 UniRef50_C6JEA0 Transcriptional regulator n=1 Tax=Ruminococcus s... 151 3e-35 UniRef50_B5XS91 Transcriptional regulator, RpiR family n=3 Tax=E... 150 4e-35 UniRef50_B9Y4Q7 Putative uncharacterized protein n=3 Tax=Firmicu... 150 5e-35 UniRef50_UPI0001BC5E7D RpiR family transcriptional regulator n=1... 150 5e-35 UniRef50_Q0KEK8 Transcriptional regulator, GlvR-family n=57 Tax=... 150 6e-35 UniRef50_A7GA30 Transcriptional regulator, RpiR family n=10 Tax=... 150 6e-35 UniRef50_B0NY52 Putative uncharacterized protein n=1 Tax=Clostri... 150 7e-35 UniRef50_UPI0000D541FA probable transcriptional regulator n=1 Ta... 149 1e-34 UniRef50_UPI00019039EA RpiR family transcriptional regulator n=2... 149 1e-34 UniRef50_A9BVS1 Transcriptional regulator, RpiR family n=4 Tax=c... 149 1e-34 UniRef50_D0BLW5 Transcriptional regulator, RpiR family n=3 Tax=G... 149 1e-34 UniRef50_Q4KEH9 Transcriptional regulator, putative n=8 Tax=Pseu... 148 1e-34 UniRef50_C1I751 Predicted protein n=3 Tax=Bacteria RepID=C1I751_... 148 1e-34 UniRef50_Q9KGC3 BH0181 protein n=3 Tax=Bacillus RepID=Q9KGC3_BACHD 148 2e-34 UniRef50_B9DUA5 Putative transcriptional regulator n=1 Tax=Strep... 148 2e-34 UniRef50_A9BZX9 Transcriptional regulator, RpiR family n=1 Tax=D... 148 2e-34 UniRef50_C1TN65 Transcriptional regulator n=1 Tax=Dethiosulfovib... 148 2e-34 UniRef50_Q5LQ93 Transcriptional regulator, RpiR family n=5 Tax=R... 148 2e-34 UniRef50_C8SN57 Transcriptional regulator, RpiR family n=1 Tax=M... 148 2e-34 UniRef50_B6GAY7 Putative uncharacterized protein n=1 Tax=Collins... 148 2e-34 UniRef50_Q03HE1 Transcriptional regulator n=1 Tax=Pediococcus pe... 148 3e-34 UniRef50_Q6MTZ4 Transcription regulator gntR n=2 Tax=Mycoplasma ... 147 3e-34 UniRef50_C6JLR3 Transcription regulator n=1 Tax=Fusobacterium va... 147 3e-34 UniRef50_A8U8R6 Putative uncharacterized protein n=1 Tax=Carnoba... 147 3e-34 UniRef50_A4EBN8 Putative uncharacterized protein n=1 Tax=Collins... 147 4e-34 UniRef50_C3RPM1 Predicted protein n=3 Tax=Bacteria RepID=C3RPM1_... 147 4e-34 UniRef50_A3YDZ1 Putative transcriptional regulator n=1 Tax=Marin... 147 5e-34 UniRef50_C7MYE5 Transcriptional regulator n=1 Tax=Saccharomonosp... 147 5e-34 UniRef50_B1QUP4 Phosphosugar-binding transcriptional regulator, ... 147 6e-34 UniRef50_C6QNE5 Transcriptional regulator, RpiR family n=1 Tax=G... 147 6e-34 UniRef50_Q2SAA1 Transcriptional regulator n=1 Tax=Hahella chejue... 146 7e-34 UniRef50_Q1GCU6 Transcriptional regulator, RpiR family n=2 Tax=R... 146 7e-34 UniRef50_Q2J952 Transcriptional regulator, RpiR family n=3 Tax=F... 146 7e-34 UniRef50_D2EJX0 Transcriptional regulator n=1 Tax=Pediococcus ac... 146 7e-34 UniRef50_D0CNW7 Transcriptional regulator, RpiR family n=1 Tax=S... 146 8e-34 UniRef50_C7HVZ9 RpiR family phosphosugar-binding transcriptional... 146 9e-34 UniRef50_A6FUC4 Transcriptional regulator, RpiR family protein n... 146 9e-34 UniRef50_B9Y9Y3 Putative uncharacterized protein n=1 Tax=Holdema... 146 1e-33 UniRef50_C3RP06 Transcriptional regulator n=2 Tax=Bacteria RepID... 145 1e-33 UniRef50_C5EFX0 N-acetylmannosamine kinase n=1 Tax=Clostridiales... 145 1e-33 UniRef50_C1I4M4 Predicted protein n=1 Tax=Clostridium sp. 7_2_43... 145 1e-33 UniRef50_A3TM76 Putative uncharacterized protein n=1 Tax=Janibac... 145 1e-33 UniRef50_C2CZ55 RpiR family transcriptional regulator n=3 Tax=La... 145 1e-33 UniRef50_C8NIR7 RpiR family phosphosugar-binding transcriptional... 145 2e-33 UniRef50_A3JGM7 Putative uncharacterized protein n=2 Tax=Proteob... 145 2e-33 UniRef50_A6WWJ9 Transcriptional regulator, RpiR family n=1 Tax=O... 145 2e-33 UniRef50_B9QTZ2 SIS domain protein n=2 Tax=Labrenzia RepID=B9QTZ... 145 2e-33 UniRef50_B4BR41 Transcriptional regulator, RpiR family n=3 Tax=B... 145 2e-33 UniRef50_B8DD46 Phosphosugar-binding transcriptional regulator, ... 145 2e-33 UniRef50_C0CX07 Putative uncharacterized protein n=1 Tax=Clostri... 145 2e-33 UniRef50_C0D8Y2 Putative uncharacterized protein n=1 Tax=Clostri... 145 2e-33 UniRef50_C3WYI9 Transcription regulator n=6 Tax=Fusobacterium Re... 145 2e-33 UniRef50_B9R3N6 SIS domain protein n=3 Tax=Alphaproteobacteria R... 145 2e-33 UniRef50_B6G7X7 Putative uncharacterized protein n=1 Tax=Collins... 145 2e-33 UniRef50_A1B8L9 Transcriptional regulator, RpiR family n=3 Tax=A... 145 2e-33 UniRef50_A6UBD6 Transcriptional regulator, RpiR family n=16 Tax=... 145 2e-33 UniRef50_A9D8B4 Putative uncharacterized protein n=1 Tax=Hoeflea... 144 3e-33 UniRef50_C7H192 RpiR familytranscriptional regulator with phosph... 144 3e-33 UniRef50_C5RND9 Transcriptional regulator, RpiR family n=1 Tax=C... 144 4e-33 UniRef50_B0NHF5 Putative uncharacterized protein n=3 Tax=Clostri... 144 4e-33 UniRef50_Q46SK2 Transcriptional regulator, RpiR family n=1 Tax=R... 143 4e-33 UniRef50_C3RJI4 Transcriptional regulator n=2 Tax=Bacteria RepID... 143 5e-33 UniRef50_Q03HS5 Transcriptional regulator n=2 Tax=Pediococcus Re... 143 5e-33 UniRef50_B7QPC3 Transcriptional regulator, RpiR family n=4 Tax=R... 143 6e-33 UniRef50_C9M9F8 Transcriptional regulator, RpiR family n=1 Tax=J... 143 6e-33 UniRef50_A6M2I1 Transcriptional regulator, RpiR family n=3 Tax=C... 143 7e-33 UniRef50_B6R4H6 Transcriptional regulator, RpiR family n=1 Tax=P... 143 7e-33 UniRef50_A8RA11 Putative uncharacterized protein n=1 Tax=Eubacte... 143 8e-33 UniRef50_Q09KH2 FitR n=27 Tax=Proteobacteria RepID=Q09KH2_ECOLX 143 8e-33 UniRef50_D2EIN0 Putative uncharacterized protein n=1 Tax=Pedioco... 143 8e-33 UniRef50_A8S164 Putative uncharacterized protein n=1 Tax=Clostri... 142 1e-32 UniRef50_D1Y461 Transcriptional regulator, RpiR family protein n... 142 1e-32 UniRef50_Q11LZ5 Transcriptional regulator, RpiR family n=1 Tax=C... 142 1e-32 UniRef50_A4EUM4 Putative transcriptional regulator protein n=1 T... 142 1e-32 UniRef50_B9DLT1 Truncated putative RpiR family transcriptional r... 142 1e-32 UniRef50_B8IEA9 Transcriptional regulator, RpiR family n=4 Tax=R... 142 1e-32 UniRef50_C3RPB8 LacI-family transcriptional regulator n=2 Tax=Ba... 142 1e-32 UniRef50_Q1JDL9 Transcriptional regulator, RpiR family n=21 Tax=... 142 2e-32 UniRef50_C5BWC4 Transcriptional regulator, RpiR family n=1 Tax=B... 142 2e-32 UniRef50_A6M2I0 Transcriptional regulator, RpiR family n=3 Tax=C... 142 2e-32 UniRef50_UPI000196B851 hypothetical protein CATMIT_00169 n=1 Tax... 142 2e-32 UniRef50_B6FRS1 Putative uncharacterized protein n=1 Tax=Clostri... 141 2e-32 UniRef50_A1WR14 Transcriptional regulator, RpiR family n=25 Tax=... 141 2e-32 UniRef50_C2BN80 RpiR family transcriptional regulator n=1 Tax=Co... 141 2e-32 UniRef50_A4JTS2 Transcriptional regulator, RpiR family n=1 Tax=B... 141 2e-32 UniRef50_Q5WBH0 RpiR family transcriptional regulator n=1 Tax=Ba... 141 2e-32 UniRef50_A6LZ63 Transcriptional regulator, RpiR family n=1 Tax=C... 141 2e-32 UniRef50_A6P0T4 Putative uncharacterized protein n=1 Tax=Bactero... 141 2e-32 UniRef50_B6QWT3 Putative transcriptional regulator protein n=1 T... 141 2e-32 UniRef50_Q6LK40 Putative transcriptional regulator n=3 Tax=Vibri... 141 2e-32 UniRef50_C3RQD3 Predicted protein n=1 Tax=Mollicutes bacterium D... 141 3e-32 UniRef50_C4ZEF4 Glucokinase n=2 Tax=Clostridiales RepID=C4ZEF4_E... 141 3e-32 UniRef50_C2H000 RpiR family transcriptional regulator n=26 Tax=E... 141 3e-32 UniRef50_C3RNE4 Transcriptional regulator n=3 Tax=Bacteria RepID... 141 3e-32 UniRef50_A6M2C0 Transcriptional regulator, RpiR family n=50 Tax=... 141 3e-32 UniRef50_B9K550 Transcriptional regulator n=1 Tax=Agrobacterium ... 140 4e-32 UniRef50_D2NRV5 Transcriptional regulator n=2 Tax=Rothia mucilag... 140 4e-32 UniRef50_C3RRE4 Transcriptional regulator n=2 Tax=Bacteria RepID... 140 4e-32 UniRef50_C3RI70 Phosphosugar-binding transcriptional regulator n... 140 4e-32 UniRef50_D1B967 Transcriptional regulator, RpiR family n=2 Tax=S... 140 5e-32 UniRef50_C9XQG1 Phosphosugar-binding transcriptional regulator n... 140 5e-32 UniRef50_Q03NG7 Transcriptional regulator n=18 Tax=Bacilli RepID... 140 5e-32 UniRef50_Q5WD27 Transcriptional regulator n=8 Tax=Bacilli RepID=... 140 6e-32 UniRef50_A6X7I1 Transcriptional regulator, RpiR family n=1 Tax=O... 140 6e-32 UniRef50_C5EIL1 RpiR-family transcriptional regulator n=2 Tax=Cl... 140 6e-32 UniRef50_D1Y5K3 SIS domain protein n=1 Tax=Pyramidobacter piscol... 140 6e-32 UniRef50_B5E566 Transcriptional regulator, RpiR family n=10 Tax=... 140 6e-32 UniRef50_B2SAV7 SIS domain protein n=40 Tax=Alphaproteobacteria ... 140 7e-32 UniRef50_P54717 HTH-type transcriptional regulator glvR n=4 Tax=... 140 7e-32 UniRef50_D0J1V5 Transcriptional regulator, RpiR family n=2 Tax=C... 140 7e-32 UniRef50_B8H4I3 Transcriptional regulator IolR n=2 Tax=Caulobact... 139 9e-32 UniRef50_C0VS80 RpiR family transcriptional regulator n=2 Tax=Co... 139 9e-32 UniRef50_UPI000196B86F hypothetical protein CATMIT_00765 n=1 Tax... 139 1e-31 UniRef50_Q6M5C3 Transcriptional regulator, rpiR family n=3 Tax=C... 139 1e-31 UniRef50_A4AG13 Putative uncharacterized protein n=1 Tax=marine ... 139 1e-31 UniRef50_Q723C8 Phosphosugar-binding transcriptional regulator, ... 139 1e-31 UniRef50_B2V3J3 Transcriptional regulator, RpiR family n=2 Tax=C... 138 1e-31 UniRef50_B5XW96 SIS domain protein n=11 Tax=Enterobacteriaceae R... 138 2e-31 UniRef50_B0N0Q7 Putative uncharacterized protein n=1 Tax=Clostri... 138 2e-31 UniRef50_A9BRR5 Transcriptional regulator, RpiR family n=2 Tax=c... 138 2e-31 UniRef50_A3VFQ4 Putative transcriptional regulator protein n=1 T... 138 2e-31 UniRef50_D1P280 Transcriptional regulator n=5 Tax=Enterobacteria... 138 2e-31 UniRef50_A7G380 Transcriptional regulator, RpiR family n=1 Tax=C... 138 2e-31 UniRef50_C2HQZ9 Transcriptional regulator n=2 Tax=Lactobacillus ... 138 2e-31 UniRef50_Q16A62 Transcriptional regulator, RpiR family, putative... 138 2e-31 UniRef50_B5J441 SIS domain protein n=1 Tax=Octadecabacter antarc... 138 2e-31 UniRef50_A3V1X8 Transcriptional regulator, RpiR family n=1 Tax=L... 138 2e-31 UniRef50_A6DXB0 SIS domain protein n=1 Tax=Roseovarius sp. TM103... 138 2e-31 UniRef50_C5SGA6 Transcriptional regulator, RpiR family n=1 Tax=A... 138 2e-31 UniRef50_C6VQQ2 Transcription regulator n=4 Tax=Firmicutes RepID... 138 2e-31 UniRef50_A7FLM3 Transcriptional regulator, RpiR family n=47 Tax=... 138 3e-31 UniRef50_C5F607 Predicted protein n=1 Tax=Lactobacillus paracase... 138 3e-31 UniRef50_A8GCW7 Transcriptional regulator, RpiR family n=1 Tax=S... 137 3e-31 UniRef50_B5RKH7 Transcriptional regulator, RpiR family n=2 Tax=P... 137 4e-31 UniRef50_A6UKE0 Transcriptional regulator, RpiR family n=4 Tax=A... 137 4e-31 UniRef50_C3RLZ3 Transcriptional regulator n=3 Tax=Bacteria RepID... 137 4e-31 UniRef50_C3RLZ2 Transcriptional regulator n=3 Tax=Bacteria RepID... 137 4e-31 UniRef50_C6VJY7 Transcription regulator n=3 Tax=Lactobacillus pl... 137 4e-31 UniRef50_A5IVA6 Transcriptional regulator n=63 Tax=Staphylococcu... 137 4e-31 UniRef50_B5I710 Transcriptional regulator n=6 Tax=Streptomyces R... 137 5e-31 UniRef50_UPI0001973198 transcriptional regulator, RpiR family pr... 137 6e-31 UniRef50_C9KM39 Transcriptional regulator GlvR n=2 Tax=Veillonel... 136 7e-31 UniRef50_UPI0001C316A3 transcriptional regulator, RpiR family n=... 136 7e-31 UniRef50_C9NY46 Predicted transcriptional regulator of the myo-i... 136 7e-31 UniRef50_A6M092 Transcriptional regulator, RpiR family n=1 Tax=C... 136 8e-31 UniRef50_C6DBI2 Transcriptional regulator, RpiR family n=9 Tax=E... 136 8e-31 UniRef50_C2JTN9 Transcriptional regulator n=3 Tax=Lactobacillus ... 136 8e-31 UniRef50_B3WB04 RpiR-like protein n=8 Tax=Lactobacillus RepID=B3... 136 9e-31 UniRef50_C5EIL0 RpiR-family transcriptional regulator n=3 Tax=Cl... 136 9e-31 UniRef50_Q11C05 Transcriptional regulator, RpiR family n=1 Tax=C... 136 9e-31 UniRef50_B9JRN1 Transcriptional regulator protein n=2 Tax=Agroba... 135 1e-30 UniRef50_A6BJ02 Putative uncharacterized protein n=3 Tax=Clostri... 135 1e-30 UniRef50_Q13RF5 Transcriptional regulator, RpiR family n=3 Tax=P... 135 1e-30 UniRef50_C7HWU0 Putative uncharacterized protein n=1 Tax=Anaeroc... 135 1e-30 UniRef50_C4L7E2 Transcriptional regulator, RpiR family n=1 Tax=T... 135 1e-30 UniRef50_A5IZ72 Transcriptional regulator n=1 Tax=Mycoplasma aga... 135 2e-30 UniRef50_B2TLN0 Phosphosugar-binding protein n=1 Tax=Clostridium... 135 2e-30 UniRef50_Q5WG85 Transcriptional regulator n=3 Tax=Bacteria RepID... 135 2e-30 UniRef50_A5I3B9 Phosphosugar-binding transcriptional regulator n... 135 2e-30 UniRef50_Q0C066 SIS domain protein n=1 Tax=Hyphomonas neptunium ... 135 2e-30 UniRef50_A6WYS0 Transcriptional regulator, RpiR family n=4 Tax=R... 134 3e-30 UniRef50_UPI000196BB09 hypothetical protein CATMIT_01392 n=1 Tax... 134 3e-30 UniRef50_UPI0001BC4077 transcriptional regulator n=1 Tax=Fusobac... 134 3e-30 UniRef50_C2HBU5 RpiR family transcriptional regulator n=3 Tax=En... 134 3e-30 UniRef50_UPI000196AB43 hypothetical protein CATMIT_01461 n=1 Tax... 134 3e-30 UniRef50_B1QZ16 Transcriptional regulator, RpiR family n=2 Tax=C... 134 3e-30 UniRef50_B2V3J2 Transcriptional regulator, RpiR family n=2 Tax=C... 134 3e-30 UniRef50_C1YQ52 Transcriptional regulator n=1 Tax=Nocardiopsis d... 134 3e-30 UniRef50_Q2KXW9 Putative transcriptional regulator n=1 Tax=Borde... 134 3e-30 UniRef50_C2EL56 RpiR family transcriptional regulator n=4 Tax=La... 133 4e-30 UniRef50_B5H8Z9 Transcriptional regulator n=3 Tax=Streptomyces R... 133 6e-30 UniRef50_A6LRA2 Transcriptional regulator, RpiR family n=3 Tax=C... 133 6e-30 UniRef50_A9IJZ1 Putative regulator (SIS family) n=4 Tax=Bordetel... 133 6e-30 UniRef50_Q1IJW8 Transcriptional regulator, RpiR family n=1 Tax=C... 133 6e-30 UniRef50_D0CS12 Transcriptional regulator, RpiR family n=1 Tax=S... 133 7e-30 UniRef50_A9BSK7 Transcriptional regulator, RpiR family n=4 Tax=B... 133 7e-30 UniRef50_Q38ZK5 Putative transcriptional regulator, RpiR family ... 133 8e-30 UniRef50_C0CQ65 Putative uncharacterized protein n=1 Tax=Blautia... 132 9e-30 UniRef50_UPI00016A9B9D transcriptional regulator, RpiR family pr... 132 1e-29 UniRef50_Q1ZB96 Transcriptional regulator n=1 Tax=Photobacterium... 132 1e-29 UniRef50_D2BNU3 Transcriptional regulator, RpiR family n=4 Tax=L... 132 1e-29 UniRef50_A3K8P8 Sugar isomerase (SIS) n=2 Tax=Rhodobacteraceae R... 132 1e-29 UniRef50_B0NY53 Putative uncharacterized protein n=1 Tax=Clostri... 132 1e-29 UniRef50_C3RJ39 Transcriptional regulator n=2 Tax=Bacteria RepID... 132 2e-29 UniRef50_A1WL40 Transcriptional regulator, RpiR family n=1 Tax=V... 132 2e-29 UniRef50_A4JPM3 Transcriptional regulator, RpiR family n=11 Tax=... 132 2e-29 UniRef50_B5ZFL0 Transcriptional regulator, RpiR family n=2 Tax=G... 132 2e-29 UniRef50_B6GCS3 Putative uncharacterized protein n=1 Tax=Collins... 131 2e-29 UniRef50_C9AB15 Phosphosugar isomerase transcriptional regulator... 131 2e-29 UniRef50_C3RHW9 Phosphosugar-binding transcriptional regulator n... 131 3e-29 UniRef50_C7M1X3 Transcriptional regulator, RpiR family n=1 Tax=A... 131 3e-29 UniRef50_D2EJM8 Phosphosugar-binding transcriptional regulator n... 131 3e-29 UniRef50_D0Z271 Transcriptional regulator n=6 Tax=Vibrionaceae R... 131 3e-29 UniRef50_C8WCY0 Transcriptional regulator, RpiR family n=3 Tax=Z... 130 4e-29 UniRef50_C6BI14 Transcriptional regulator, RpiR family n=6 Tax=R... 130 4e-29 UniRef50_B9J832 Transcriptional regulator protein n=1 Tax=Agroba... 130 5e-29 UniRef50_C4XE43 Putative uncharacterized protein n=1 Tax=Mycopla... 130 5e-29 UniRef50_B9DVI9 RpiR family regulatory protein n=1 Tax=Streptoco... 130 6e-29 UniRef50_B1HYT1 Transcriptional regulator n=2 Tax=Bacillaceae Re... 130 6e-29 UniRef50_A8S127 Putative uncharacterized protein n=1 Tax=Clostri... 130 6e-29 UniRef50_UPI000196AB39 hypothetical protein CATMIT_01159 n=1 Tax... 130 6e-29 UniRef50_Q98JM0 Mlr1883 protein n=2 Tax=Mesorhizobium RepID=Q98J... 130 6e-29 UniRef50_C5EHV8 RpiR-family transcriptional regulator n=1 Tax=Cl... 130 7e-29 UniRef50_C6L8R9 Putative phosphosugar-binding transcriptional re... 130 8e-29 UniRef50_B0G8I7 Putative uncharacterized protein n=1 Tax=Dorea f... 129 9e-29 UniRef50_C6VKP3 Transcription regulator n=3 Tax=Lactobacillus pl... 129 1e-28 UniRef50_C9XKC4 RpiR-family transcriptional regulator n=3 Tax=Cl... 129 1e-28 UniRef50_C3RLW4 Predicted protein n=3 Tax=Bacteria RepID=C3RLW4_... 129 1e-28 UniRef50_B9KVH6 Transcriptional regulator, RpiR family n=2 Tax=R... 129 1e-28 UniRef50_C5NW06 Transcriptional regulator, RpiR family n=2 Tax=F... 129 1e-28 UniRef50_C3W9G1 Predicted protein n=3 Tax=Fusobacterium RepID=C3... 129 1e-28 UniRef50_A1VUM9 Transcriptional regulator, RpiR family n=4 Tax=C... 129 1e-28 UniRef50_C9M9T3 Putative SIS domain protein n=1 Tax=Jonquetella ... 129 1e-28 UniRef50_UPI0001C31BBF transcriptional regulator, RpiR family n=... 129 1e-28 UniRef50_Q04H60 Transcriptional regulator n=2 Tax=Oenococcus oen... 129 1e-28 UniRef50_C3RJQ3 Predicted protein n=2 Tax=Bacteria RepID=C3RJQ3_... 129 1e-28 UniRef50_A9WLS8 Transcriptional regulator, RpiR family n=1 Tax=R... 128 1e-28 UniRef50_Q02WG9 Transcriptional regulator n=6 Tax=Lactococcus Re... 128 1e-28 UniRef50_C6CS19 Transcriptional regulator, RpiR family n=1 Tax=P... 128 1e-28 UniRef50_C4V4P0 RpiR family transcriptional regulator n=1 Tax=Se... 128 2e-28 UniRef50_A3SJ61 SIS domain protein n=1 Tax=Roseovarius nubinhibe... 128 2e-28 UniRef50_A1BB42 Transcriptional regulator, RpiR family n=1 Tax=P... 128 2e-28 UniRef50_C5EP41 RpiR family transcriptional regulator n=1 Tax=Cl... 128 2e-28 UniRef50_C1IAA4 Transcriptional regulator n=1 Tax=Clostridium sp... 128 2e-28 UniRef50_A8AMT2 Putative uncharacterized protein n=3 Tax=Enterob... 128 2e-28 UniRef50_C0FQ68 Putative uncharacterized protein n=1 Tax=Rosebur... 128 2e-28 UniRef50_D1AK32 Transcriptional regulator, RpiR family n=1 Tax=S... 128 2e-28 UniRef50_Q13FP6 Transcriptional regulator, RpiR family n=3 Tax=P... 128 2e-28 UniRef50_A8TQ66 Transcriptional regulator n=1 Tax=alpha proteoba... 128 2e-28 UniRef50_Q2BDH7 RpiR-family transcriptional regulator n=1 Tax=Ba... 128 2e-28 UniRef50_B9DUC4 RpiR-family regulatory protein n=1 Tax=Streptoco... 128 2e-28 UniRef50_Q98AI2 Mlr5989 protein n=1 Tax=Mesorhizobium loti RepID... 128 3e-28 UniRef50_C2CHV1 RpiR family transcriptional regulator n=1 Tax=An... 128 3e-28 UniRef50_Q184P9 Phosphosugar-binding transcriptional regulator n... 127 3e-28 UniRef50_Q1AYI2 Transcriptional regulator, RpiR family n=17 Tax=... 127 4e-28 UniRef50_C9A4Z8 Transcription regulator n=4 Tax=Enterococcus Rep... 127 4e-28 UniRef50_A5G0Y8 Transcriptional regulator, RpiR family n=7 Tax=P... 127 5e-28 UniRef50_UPI0001AF5353 RpiR family transcriptional regulator n=1... 127 5e-28 UniRef50_B0MFI6 Putative uncharacterized protein n=2 Tax=Anaeros... 127 5e-28 UniRef50_A6LTH7 Transcriptional regulator, RpiR family n=1 Tax=C... 127 5e-28 UniRef50_A5TS02 RpiR family transcriptional regulator n=3 Tax=Fu... 127 6e-28 UniRef50_D2TS37 Putative DNA binding protein n=1 Tax=Citrobacter... 127 6e-28 UniRef50_C5F7B7 Phosphosugar-binding transcriptional regulator n... 127 6e-28 UniRef50_C5EFT9 HTH-type transcriptional regulator glvR n=1 Tax=... 127 6e-28 UniRef50_C1YLY0 Transcriptional regulator n=1 Tax=Nocardiopsis d... 126 8e-28 UniRef50_A9WNR4 Transcriptional regulator, RpiR family n=1 Tax=R... 126 8e-28 UniRef50_B0NEG5 Putative uncharacterized protein n=1 Tax=Clostri... 126 8e-28 UniRef50_C7LIK3 Transcriptional regulator, RpiR family n=39 Tax=... 126 8e-28 UniRef50_Q4A725 Transcriptional regulator n=1 Tax=Mycoplasma syn... 126 9e-28 UniRef50_Q1IJ92 Transcriptional regulator, RpiR family n=1 Tax=C... 126 1e-27 UniRef50_C1YMF9 Transcriptional regulator n=1 Tax=Nocardiopsis d... 126 1e-27 UniRef50_Q1YL64 Possible transcriptional regulator n=1 Tax=Auran... 125 1e-27 UniRef50_C2ECD8 Transcriptional regulator n=1 Tax=Lactobacillus ... 125 1e-27 UniRef50_C7QJ71 Transcriptional regulator, RpiR family n=5 Tax=A... 125 1e-27 UniRef50_C9A974 Transcription regulator n=4 Tax=Enterococcus Rep... 125 1e-27 UniRef50_Q14LR0 Hypothetical transcriptional regulator with heli... 125 1e-27 UniRef50_Q1GL90 Transcriptional regulator, RpiR family n=9 Tax=R... 125 1e-27 UniRef50_C2GZH1 RpiR family transcriptional regulator n=17 Tax=E... 125 2e-27 UniRef50_C1D3U9 Putative transcriptional regulator, RpiR family ... 125 2e-27 UniRef50_Q88GX5 Transcriptional regulator, RpiR family n=7 Tax=P... 125 2e-27 UniRef50_Q97LM6 Transcriptional regulator, RpiR family n=6 Tax=C... 125 2e-27 UniRef50_C9XQF1 Phosphosugar-binding transcriptional regulator n... 125 2e-27 UniRef50_Q6A765 Transcriptional regulator, RpiR family n=3 Tax=P... 125 2e-27 UniRef50_C3RH58 Predicted protein n=2 Tax=Bacteria RepID=C3RH58_... 125 2e-27 UniRef50_O67500 Uncharacterized phosphosugar isomerase aq_1546 n... 125 2e-27 UniRef50_C6ATF5 Transcriptional regulator, RpiR family n=17 Tax=... 125 2e-27 UniRef50_C5B7U9 Transcriptional regulator, RpiR family protein n... 124 3e-27 UniRef50_Q046R3 Transcriptional regulator n=7 Tax=Lactobacillus ... 124 3e-27 UniRef50_A5EGL2 Transcriptional regulator, RpiR family n=1 Tax=B... 124 3e-27 UniRef50_A6X385 Transcriptional regulator, RpiR family n=2 Tax=O... 124 3e-27 UniRef50_A0K0I4 Transcriptional regulator, RpiR family n=1 Tax=A... 124 4e-27 UniRef50_A8FAT4 Transcriptional regulator n=2 Tax=Bacillus RepID... 124 4e-27 UniRef50_C9Q7M3 Transcriptional regulator n=2 Tax=Vibrio RepID=C... 124 4e-27 UniRef50_UPI0001909264 RpiR family transcriptional regulator n=1... 123 6e-27 UniRef50_Q930C4 Transcriptional regulator, RpiR family n=1 Tax=S... 123 6e-27 UniRef50_B1IEE2 Transcriptional regulator, RpiR family n=11 Tax=... 123 6e-27 UniRef50_D1PQY5 RpiR-family transcriptional regulator n=1 Tax=Su... 123 7e-27 UniRef50_B7QTT1 Transcriptional regulator, rpir family n=2 Tax=R... 123 8e-27 UniRef50_C7RG92 Transcriptional regulator, RpiR family n=2 Tax=A... 123 8e-27 UniRef50_D1AJC9 Transcriptional regulator, RpiR family n=4 Tax=B... 123 9e-27 UniRef50_A0QRN2 Transcriptional regulator n=1 Tax=Mycobacterium ... 122 1e-26 UniRef50_C8SNA8 Transcriptional regulator, RpiR family n=2 Tax=M... 122 2e-26 UniRef50_C2HN51 Transcriptional regulator n=7 Tax=Lactobacillus ... 121 2e-26 UniRef50_C2HLE6 Transcriptional regulator n=8 Tax=Lactobacillus ... 121 2e-26 UniRef50_C7T7R2 Transcriptional regulator, RpiR family n=7 Tax=L... 121 2e-26 UniRef50_Q1GH80 Transcriptional regulator, RpiR family n=6 Tax=R... 121 2e-26 UniRef50_C9XKC3 RpiR-family transcriptional regulator n=4 Tax=Cl... 121 3e-26 UniRef50_C9A749 Putative uncharacterized protein n=1 Tax=Enteroc... 121 3e-26 UniRef50_C7RFE2 Transcriptional regulator, RpiR family n=1 Tax=A... 121 3e-26 UniRef50_Q0C3E7 Sugar isomerase, KpsF/GutQ family n=2 Tax=Alphap... 121 3e-26 UniRef50_C4XF00 Putative uncharacterized protein n=1 Tax=Mycopla... 121 3e-26 UniRef50_A0K0Z5 Transcriptional regulator, RpiR family n=3 Tax=M... 121 3e-26 UniRef50_D1AGI8 Transcriptional regulator, RpiR family n=1 Tax=S... 121 3e-26 UniRef50_A1A2Z7 Putative RpiR-family transcriptional regulatory ... 120 4e-26 UniRef50_C9LT74 Arabinose 5-phosphate isomerase n=2 Tax=Bacteria... 120 4e-26 UniRef50_C1I6H5 Predicted protein n=1 Tax=Clostridium sp. 7_2_43... 120 4e-26 UniRef50_C2BXZ0 RpiR family transcriptional regulator n=4 Tax=Ba... 120 5e-26 UniRef50_D2BPU5 Transcriptional regulator, RpiR family n=4 Tax=L... 120 6e-26 UniRef50_UPI0001788C32 transcriptional regulator, RpiR family n=... 120 6e-26 UniRef50_D1ARL0 Transcriptional regulator, RpiR family n=1 Tax=S... 120 6e-26 UniRef50_A6W9S6 Transcriptional regulator, RpiR family n=1 Tax=K... 120 6e-26 UniRef50_UPI000196ADBA hypothetical protein CATMIT_01190 n=1 Tax... 120 7e-26 UniRef50_B1R0N4 SIS domain protein n=2 Tax=Clostridium butyricum... 120 7e-26 UniRef50_Q7D403 Transcriptional regulator, RpiR family n=2 Tax=A... 120 7e-26 UniRef50_B1I1Y6 Glucosamine--fructose-6-phosphate aminotransfera... 119 8e-26 UniRef50_C2BS39 Glutamine--fructose-6-phosphate transaminase, is... 119 1e-25 UniRef50_C3RP07 Transcriptional regulator n=2 Tax=Bacteria RepID... 119 1e-25 UniRef50_A9DTL4 Transcriptional regulator, RpiR family protein n... 119 1e-25 UniRef50_A2RL75 Putative HTH-type transcriptional regulator n=1 ... 119 1e-25 UniRef50_Q8EMY0 Putative uncharacterized protein OB2710 n=1 Tax=... 119 1e-25 UniRef50_UPI00016C007A transcriptional regulator, RpiR family pr... 118 2e-25 UniRef50_UPI000196AA29 hypothetical protein CATMIT_01879 n=1 Tax... 118 2e-25 UniRef50_C8S1A0 Transcriptional regulator, RpiR family n=1 Tax=R... 118 2e-25 UniRef50_UPI000050FE27 transcriptional regulator, RpiR family pr... 118 2e-25 UniRef50_Q0FH55 Sugar isomerase (SIS) n=2 Tax=Rhodobacteraceae R... 118 2e-25 UniRef50_A5V7B7 Transcriptional regulator, RpiR family n=1 Tax=S... 118 3e-25 UniRef50_Q5JH71 Glucosamine--fructose-6-phosphate aminotransfera... 118 3e-25 UniRef50_UPI000196AB3E hypothetical protein CATMIT_01164 n=1 Tax... 118 3e-25 UniRef50_O26273 Glucosamine--fructose-6-phosphate aminotransfera... 117 4e-25 UniRef50_Q0FJM2 Putative uncharacterized protein n=1 Tax=Roseova... 117 5e-25 UniRef50_D1U3G0 KpsF/GutQ family protein n=1 Tax=Desulfovibrio a... 117 5e-25 UniRef50_B4RJ65 KpsF n=58 Tax=Bacteria RepID=B4RJ65_NEIG2 117 5e-25 UniRef50_C9A1P4 Transcriptional regulator n=1 Tax=Enterococcus g... 116 5e-25 UniRef50_Q03C42 Transcriptional regulator n=1 Tax=Lactobacillus ... 116 6e-25 UniRef50_C6VU42 KpsF/GutQ family protein n=3 Tax=Sphingobacteria... 116 6e-25 UniRef50_C2DZ33 Transcriptional regulator n=9 Tax=Lactobacillus ... 116 6e-25 UniRef50_C7TGE4 Transcriptional regulator, RpiR family n=4 Tax=L... 116 7e-25 UniRef50_A6TPC3 Transcriptional regulator, RpiR family n=1 Tax=A... 116 7e-25 UniRef50_C5D0V0 Transcriptional regulator, RpiR family n=1 Tax=V... 116 7e-25 UniRef50_B8CZC0 KpsF/GutQ family protein n=4 Tax=Bacteria RepID=... 116 7e-25 UniRef50_C8P353 Putative uncharacterized protein n=1 Tax=Erysipe... 116 7e-25 UniRef50_Q1QYR8 Transcriptional regulator, RpiR family n=1 Tax=C... 116 7e-25 UniRef50_A8U5R1 RpiR-family transcriptional regulator n=2 Tax=Ba... 116 8e-25 UniRef50_A1FB39 Transcriptional regulator (Fragment) n=1 Tax=Vib... 116 8e-25 UniRef50_C1IAG1 Predicted protein n=1 Tax=Clostridium sp. 7_2_43... 116 9e-25 UniRef50_C6DIN8 KpsF/GutQ family protein n=10 Tax=Enterobacteria... 116 1e-24 UniRef50_C6JMB7 Polysialic acid capsule expression protein kpsF ... 116 1e-24 UniRef50_A5LQQ9 Phosphosugar-binding transcriptional regulator, ... 116 1e-24 UniRef50_A6VSF8 Transcriptional regulator, RpiR family n=4 Tax=G... 116 1e-24 UniRef50_A8IDV1 Transcriptional regulator n=1 Tax=Azorhizobium c... 115 1e-24 UniRef50_Q47334 Polysialic acid capsule expression protein kpsF ... 115 1e-24 UniRef50_A3PQG1 Transcriptional regulator, RpiR family n=6 Tax=R... 115 2e-24 UniRef50_C1TKE5 KpsF/GutQ family protein n=1 Tax=Dethiosulfovibr... 115 2e-24 UniRef50_Q8D1Q8 Arabinose 5-phosphate isomerase n=525 Tax=cellul... 115 2e-24 UniRef50_B0SHW1 Sugar phosphate isomerase n=6 Tax=Leptospira Rep... 115 2e-24 UniRef50_C5J6W4 Transcriptional regulator n=1 Tax=Mycoplasma con... 115 2e-24 UniRef50_Q15U63 Transcriptional regulator, RpiR family n=1 Tax=P... 115 2e-24 UniRef50_Q10ZT6 KpsF/GutQ family protein n=1 Tax=Trichodesmium e... 115 2e-24 UniRef50_B6ARK4 Sugar isomerase, KpsF/GutQ family n=3 Tax=Bacter... 115 3e-24 UniRef50_A4GJ53 Putative KpsF/GutQ n=1 Tax=uncultured marine Nit... 115 3e-24 UniRef50_Q8R841 Glucosamine--fructose-6-phosphate aminotransfera... 114 3e-24 UniRef50_Q8KG38 Glucosamine--fructose-6-phosphate aminotransfera... 114 3e-24 UniRef50_D2BNU6 Transcriptional regulator, RpiR family n=4 Tax=L... 114 4e-24 UniRef50_A8LRZ7 Transcriptional regulator n=2 Tax=Rhodobacterale... 114 4e-24 UniRef50_UPI000196AA26 hypothetical protein CATMIT_01876 n=1 Tax... 114 4e-24 UniRef50_Q3ATD5 KpsF/GutQ n=10 Tax=Chlorobiaceae RepID=Q3ATD5_CHLCH 114 4e-24 UniRef50_B1IED4 SIS domain protein n=10 Tax=Clostridium RepID=B1... 114 4e-24 UniRef50_C1A8V3 Arabinose 5-phosphate isomerase n=1 Tax=Gemmatim... 113 5e-24 UniRef50_A4FJ87 Transcriptional regulator, RpiR family n=1 Tax=S... 113 5e-24 UniRef50_C9N979 Transcriptional regulator, RpiR family n=2 Tax=S... 113 5e-24 UniRef50_C9A505 Transcriptional regulator n=4 Tax=Enterococcus R... 113 5e-24 UniRef50_Q03HM4 Transcriptional regulator n=1 Tax=Pediococcus pe... 113 6e-24 UniRef50_Q12C10 Transcriptional regulator, RpiR family n=2 Tax=C... 113 6e-24 UniRef50_D1B671 KpsF/GutQ family protein n=2 Tax=Synergistaceae ... 113 6e-24 UniRef50_C6I0S8 Sugar isomerase, KpsF/GutQ family protein n=1 Ta... 113 7e-24 UniRef50_A6X2Q6 Transcriptional regulator, RpiR family n=1 Tax=O... 113 7e-24 UniRef50_B6GDB9 Putative uncharacterized protein n=1 Tax=Collins... 113 7e-24 UniRef50_C2EN35 RpiR family transcriptional regulator n=1 Tax=La... 113 8e-24 UniRef50_C8PCG0 Transcriptional regulator n=2 Tax=Lactobacillus ... 113 8e-24 UniRef50_Q2RYH6 KpsF/GutQ n=64 Tax=Proteobacteria RepID=Q2RYH6_R... 113 9e-24 UniRef50_Q9WXZ5 Glucosamine--fructose-6-phosphate aminotransfera... 113 9e-24 UniRef50_B8DD88 Phosphosugar-binding protein n=16 Tax=Listeria m... 113 1e-23 UniRef50_Q6F0H6 Putative transcriptional regulator n=1 Tax=Mesop... 112 1e-23 UniRef50_D2BP23 Transcriptional regulator, RpiR family n=3 Tax=L... 112 1e-23 UniRef50_Q4A886 Transcriptional regulator n=5 Tax=Mycoplasma hyo... 112 1e-23 UniRef50_Q2GAE9 KpsF/GutQ family protein n=1 Tax=Novosphingobium... 112 1e-23 UniRef50_Q1LZ65 RpiR-like protein n=27 Tax=Lactobacillales RepID... 112 1e-23 UniRef50_Q3JP70 Arabinose-5-phosphate isomerase n=5 Tax=Proteoba... 112 1e-23 UniRef50_B2KC19 KpsF/GutQ family protein n=1 Tax=Elusimicrobium ... 111 2e-23 UniRef50_B3E057 Arabinose 5-phosphate isomerase and CBS domains ... 111 2e-23 UniRef50_O68956 Glucosamine--fructose-6-phosphate aminotransfera... 111 2e-23 UniRef50_A6NTR6 Putative uncharacterized protein n=2 Tax=Bacteri... 111 2e-23 UniRef50_A0LE58 KpsF/GutQ family protein n=8 Tax=Bacteria RepID=... 111 2e-23 UniRef50_C4FYW5 Putative uncharacterized protein n=2 Tax=Abiotro... 111 2e-23 UniRef50_B6IXW6 Sugar isomerase, KpsF n=1 Tax=Rhodospirillum cen... 111 3e-23 UniRef50_Q2ST84 Phosphosugar-binding transcriptional regulator, ... 111 3e-23 UniRef50_Q6AQ42 Related to polysialic acid capsule expression pr... 111 3e-23 UniRef50_UPI000196CB04 hypothetical protein CATMIT_02765 n=1 Tax... 111 3e-23 UniRef50_B6BVE7 Arabinose 5-phosphate isomerase n=1 Tax=beta pro... 111 3e-23 UniRef50_C3RJ80 Predicted protein n=3 Tax=Bacteria RepID=C3RJ80_... 111 4e-23 UniRef50_Q6MPN9 Polysialic acid capsule expression protein n=1 T... 110 4e-23 UniRef50_C7LLS0 Transcriptional regulator, RpiR family protein n... 110 4e-23 UniRef50_A3VSH4 Arabinose 5-phosphate isomerase n=1 Tax=Parvular... 110 5e-23 UniRef50_B7ATA5 Putative uncharacterized protein n=4 Tax=Bacteri... 110 5e-23 UniRef50_B6G7Y4 Putative uncharacterized protein n=1 Tax=Collins... 110 5e-23 UniRef50_C4XDS0 Putative uncharacterized protein n=1 Tax=Mycopla... 110 5e-23 UniRef50_C6X0T7 Arabinose 5-phosphate isomerase n=2 Tax=Flavobac... 110 6e-23 UniRef50_A0P1C3 SIS domain protein n=2 Tax=Rhodobacteraceae RepI... 110 6e-23 UniRef50_B9KF21 Arabinose-5-phosphate isomerase n=29 Tax=Bacteri... 110 6e-23 UniRef50_D2R6F2 KpsF/GutQ family protein n=1 Tax=Pirellula stale... 110 6e-23 UniRef50_C1RI47 Transcriptional regulator n=1 Tax=Cellulomonas f... 110 7e-23 UniRef50_A4X3Y2 Helix-turn-helix protein RpiR n=3 Tax=Actinomyce... 110 7e-23 UniRef50_C9A748 Transcriptional regulator n=1 Tax=Enterococcus c... 110 7e-23 UniRef50_Q1MS86 FOG: CBS domain n=10 Tax=Desulfovibrionales RepI... 110 8e-23 UniRef50_A1VGM9 KpsF/GutQ family protein n=1 Tax=Desulfovibrio v... 109 1e-22 UniRef50_Q7MJB4 Transcriptional regulator n=3 Tax=Vibrio RepID=Q... 109 1e-22 UniRef50_Q3Z924 Glucosamine--fructose-6-phosphate aminotransfera... 109 1e-22 UniRef50_C4ICI5 Transcriptional regulator, RpiR family n=2 Tax=C... 109 1e-22 UniRef50_D1TFW4 Putative transcriptional regulator, RpiR family ... 109 1e-22 UniRef50_B0BZZ6 Sugar isomerase, KpsF/GutQ family n=1 Tax=Acaryo... 109 1e-22 UniRef50_Q89R61 Bll2911 protein n=1 Tax=Bradyrhizobium japonicum... 109 1e-22 UniRef50_Q8EWN1 Transcriptional regulator n=1 Tax=Mycoplasma pen... 109 1e-22 UniRef50_B9CKY1 Transcriptional regulator, RpiR family protein n... 109 1e-22 UniRef50_A3ZL92 Putative uncharacterized protein n=1 Tax=Blastop... 109 1e-22 UniRef50_A3K9H4 Putative uncharacterized protein n=1 Tax=Sagittu... 109 1e-22 UniRef50_A8TDJ4 Glucosamine--fructose-6-phosphate aminotransfera... 109 1e-22 UniRef50_A9EFQ3 SIS domain protein n=2 Tax=Rhodobacteraceae RepI... 108 1e-22 UniRef50_C7TGG9 Phosphosugar isomerase n=4 Tax=Lactobacillus Rep... 108 1e-22 UniRef50_Q14NM0 Hypothetical transmembrane protein n=1 Tax=Spiro... 108 2e-22 UniRef50_A6CXK8 D-arabinose 5-phosphate isomerase n=1 Tax=Vibrio... 108 2e-22 UniRef50_B0PES3 Putative uncharacterized protein n=1 Tax=Anaerot... 108 2e-22 UniRef50_A8GDB9 Transcriptional regulator, RpiR family n=1 Tax=S... 108 2e-22 UniRef50_A8IPW3 Sugar isomerase n=58 Tax=Bacteria RepID=A8IPW3_A... 108 2e-22 UniRef50_A3PT11 Transcriptional regulator, RpiR family n=4 Tax=M... 108 2e-22 UniRef50_Q06210 Glucosamine--fructose-6-phosphate aminotransfera... 108 2e-22 UniRef50_B0VH11 Carbohydrate isomerase, KpsF/GutQ family n=1 Tax... 108 2e-22 UniRef50_Q58815 Mja gf6p intein n=17 Tax=cellular organisms RepI... 108 2e-22 UniRef50_Q2LUX9 Arabinose-5-phosphate isomerase n=1 Tax=Syntroph... 108 3e-22 UniRef50_D1AIY1 KpsF/GutQ family protein n=11 Tax=Fusobacteriace... 108 3e-22 UniRef50_B2JHA3 Transcriptional regulator, RpiR family n=5 Tax=B... 108 3e-22 UniRef50_D1YX72 Glucosamine--fructose-6-phosphate aminotransfera... 108 3e-22 UniRef50_C2FAJ3 RpiR family transcriptional regulator n=1 Tax=La... 108 3e-22 UniRef50_Q0RUQ9 Possible 6-phospho-3-hexuloisomerase n=3 Tax=Rho... 107 3e-22 UniRef50_B3QSH3 KpsF/GutQ family protein n=1 Tax=Chloroherpeton ... 107 4e-22 UniRef50_A5VEU9 KpsF/GutQ family protein n=2 Tax=Sphingomonas wi... 107 4e-22 UniRef50_D1S1T7 Transcriptional regulator, RpiR family n=3 Tax=A... 107 5e-22 UniRef50_Q1IST9 KpsF/GutQ family protein n=5 Tax=Bacteria RepID=... 107 5e-22 UniRef50_D0LJS5 KpsF/GutQ family protein n=1 Tax=Haliangium ochr... 106 6e-22 UniRef50_B1C072 Putative uncharacterized protein n=2 Tax=unclass... 106 7e-22 UniRef50_A5EVJ8 Arabinose 5-phosphate isomerase n=1 Tax=Dichelob... 106 8e-22 UniRef50_A1RWB5 Glutamine--fructose-6-phosphate transaminase n=1... 106 8e-22 UniRef50_Q1QYQ3 Transcriptional regulator, RpiR family n=1 Tax=C... 106 1e-21 UniRef50_C7NES0 KpsF/GutQ family protein n=6 Tax=Fusobacteriacea... 106 1e-21 UniRef50_A4NYS2 N-acetylneuraminate lyase n=2 Tax=Haemophilus in... 106 1e-21 UniRef50_C3MFV3 Sugar isomerase, KpsF/GutQ family protein n=8 Ta... 106 1e-21 UniRef50_B9KGQ0 Glucosamine--fructose-6-phosphate aminotransfera... 106 1e-21 UniRef50_A6M3E6 Transcriptional regulator, RpiR family n=1 Tax=C... 105 1e-21 UniRef50_Q9HT00 Glucosamine--fructose-6-phosphate aminotransfera... 105 2e-21 UniRef50_P45313 Probable phosphosugar isomerase HI1678 n=43 Tax=... 105 2e-21 UniRef50_A1WQC0 Transcriptional regulator, RpiR family n=1 Tax=V... 105 2e-21 UniRef50_B4U6U7 KpsF/GutQ family protein n=1 Tax=Hydrogenobaculu... 105 2e-21 UniRef50_C1E1Z8 Predicted protein n=1 Tax=Micromonas sp. RCC299 ... 105 2e-21 UniRef50_D1BR20 Glucosamine/fructose-6-phosphate aminotransferas... 105 2e-21 UniRef50_D1JGX9 Glucosamine--fructose-6-phosphateaminotransferas... 105 2e-21 UniRef50_UPI000196C61B hypothetical protein CATMIT_02058 n=1 Tax... 105 2e-21 UniRef50_Q7UL04 Putative uncharacterized protein n=1 Tax=Rhodopi... 105 2e-21 UniRef50_D2PN41 Arabinose-5-phosphate isomerase n=1 Tax=Kribbell... 105 2e-21 UniRef50_D0SVQ9 Arabinose 5-phosphate isomerase n=2 Tax=Acinetob... 105 2e-21 UniRef50_A1RA62 Putative SIS (Sugar ISomerase) domain protein n=... 105 2e-21 UniRef50_C0X7I6 Phosphosugar-binding transcriptional regulator n... 105 3e-21 UniRef50_D0XK10 KpsF/GutQ family protein n=1 Tax=Brevundimonas s... 104 3e-21 UniRef50_C1PCJ9 Glucosamine/fructose-6-phosphate aminotransferas... 104 3e-21 UniRef50_Q6XYV4 Transcriptional regulator n=2 Tax=Spiroplasma Re... 104 3e-21 UniRef50_Q0FF93 KpsF/GutQ family protein n=1 Tax=Rhodobacterales... 104 3e-21 UniRef50_B9Y5H0 Putative uncharacterized protein n=1 Tax=Holdema... 104 4e-21 UniRef50_A1SXE5 DNA-binding helix-turn-helix domain-containing t... 104 4e-21 UniRef50_A0B0Z7 Transcriptional regulator, RpiR family n=68 Tax=... 104 4e-21 UniRef50_Q8AAB1 Glucosamine--fructose-6-phosphate aminotransfera... 104 4e-21 UniRef50_Q0BL14 Arabinose-5-phosphate isomerase n=20 Tax=Gammapr... 104 4e-21 UniRef50_Q041A4 Transcriptional regulator n=8 Tax=Lactobacillus ... 104 5e-21 UniRef50_B5I9S2 SIS domain protein n=2 Tax=Aciduliprofundum boon... 103 6e-21 UniRef50_A5VTJ4 Sugar isomerase, KpsF/GutQ n=36 Tax=Rhizobiales ... 103 6e-21 UniRef50_Q1CZW3 GutQ protein n=6 Tax=Cystobacterineae RepID=Q1CZ... 103 6e-21 UniRef50_Q6MHW0 Glucosamine--fructose-6-phosphate aminotransfera... 103 6e-21 UniRef50_A9A435 Glucosamine--fructose-6-phosphate aminotransfera... 103 7e-21 UniRef50_Q1N8R1 Sugar isomerase, KpsF/GutQ n=1 Tax=Sphingomonas ... 103 8e-21 UniRef50_D1PBX9 Glutamine-fructose-6-phosphate transaminase n=13... 103 8e-21 UniRef50_C4ICA8 SIS domain protein n=2 Tax=Clostridium butyricum... 103 8e-21 UniRef50_UPI0001C30EDC glucosamine/fructose-6-phosphate aminotra... 103 9e-21 UniRef50_B0N1U0 Putative uncharacterized protein n=3 Tax=Bacteri... 102 1e-20 UniRef50_A5UNH8 Glucosamine--fructose-6-phosphate aminotransfera... 102 1e-20 UniRef50_B5XTC8 Transcriptional regulator, RpiR family n=6 Tax=E... 102 1e-20 UniRef50_A3ERU9 Glucosamine--fructose-6-phosphate aminotransfera... 102 1e-20 UniRef50_C2K0T0 Possible transcriptional regulator n=2 Tax=Lacto... 102 1e-20 UniRef50_UPI00016A65F3 transcriptional regulator, RpiR family pr... 102 1e-20 UniRef50_D0D8D8 Transcriptional regulator, RpiR family n=1 Tax=C... 102 2e-20 UniRef50_C6AWU1 Transcriptional regulator, RpiR family n=11 Tax=... 102 2e-20 UniRef50_D1HUZ9 Whole genome shotgun sequence of line PN40024, s... 102 2e-20 UniRef50_Q1Q2H0 Putative uncharacterized protein n=1 Tax=Candida... 102 2e-20 UniRef50_Q3B0E2 KpsF/GutQ n=16 Tax=Cyanobacteria RepID=Q3B0E2_SYNS9 102 2e-20 UniRef50_C1NBK9 KpsF/GutQ family protein n=1 Tax=Escherichia sp.... 101 2e-20 UniRef50_D1PYZ2 Arabinose 5-phosphate isomerase n=9 Tax=Prevotel... 101 2e-20 UniRef50_C2D7F4 Glutamine--fructose-6-phosphate transaminase (Is... 101 2e-20 UniRef50_Q4FNC0 Arabinose 5-phosphate isomerase n=3 Tax=Candidat... 101 2e-20 UniRef50_A0RRT4 KpsF/GutQ n=18 Tax=Bacteria RepID=A0RRT4_CAMFF 101 2e-20 UniRef50_A4VW77 Transcriptional regulator n=1 Tax=Streptococcus ... 101 2e-20 UniRef50_Q9Z826 Uncharacterized protein CPn_0526/CP_0226/CPj0526... 101 3e-20 UniRef50_D1C5T9 Glutamine--fructose-6-phosphate transaminase (Is... 101 3e-20 UniRef50_C3RLJ5 Transcriptional regulator n=2 Tax=Bacteria RepID... 101 3e-20 UniRef50_Q11YC7 Sugar phosphate isomerase, KpsF/GutQ family n=27... 101 3e-20 UniRef50_Q8U472 Hexulose-6-phosphate synthase (D-arabino 3-hexul... 101 3e-20 UniRef50_Q1ZIS3 GutQ protein n=1 Tax=Psychromonas sp. CNPT3 RepI... 101 3e-20 UniRef50_B1CBZ6 Putative uncharacterized protein n=1 Tax=Anaerof... 101 4e-20 UniRef50_C0QVG6 D-arabinose-5-phosphate isomerase n=1 Tax=Brachy... 100 4e-20 UniRef50_C6A1J9 Bifunctional D-arabino 3-hexulose-6-phosphate fo... 100 5e-20 UniRef50_Q9YCQ6 Glucosamine--fructose-6-phosphate aminotransfera... 100 5e-20 UniRef50_Q8Q038 Glucosamine--fructose-6-phosphate aminotransfera... 100 5e-20 UniRef50_A3DPP9 Glutamine--fructose-6-phosphate transaminase n=1... 100 6e-20 UniRef50_O27589 Conserved protein n=6 Tax=Methanobacteriaceae Re... 100 6e-20 UniRef50_B5H4P8 Predicted protein n=4 Tax=Streptomyces RepID=B5H... 100 7e-20 UniRef50_C7M027 Transcriptional regulator, RpiR family n=1 Tax=A... 100 8e-20 UniRef50_Q9LBW5 3-hexulose-6-phosphate isomerase n=2 Tax=Actinom... 100 8e-20 UniRef50_UPI0001C420F8 glucosamine-fructose-6-phosphate aminotra... 100 1e-19 UniRef50_C3RNI1 Predicted protein n=2 Tax=Bacteria RepID=C3RNI1_... 100 1e-19 UniRef50_C1QDK1 KpsF/GutQ family protein n=1 Tax=Brachyspira mur... 100 1e-19 UniRef50_Q96XH0 581aa long hypothetical glucosamine--fructose-6-... 99 1e-19 UniRef50_A9B0V2 Glutamine--fructose-6-phosphate transaminase (Is... 99 1e-19 UniRef50_Q1MQL2 Glucosamine 6-phosphate synthetase, contains ami... 99 1e-19 UniRef50_A9KTD7 Glucosamine--fructose-6-phosphate aminotransfera... 99 1e-19 UniRef50_Q4A7H2 Putative uncharacterized protein n=6 Tax=Mycopla... 99 1e-19 UniRef50_O26351 Uncharacterized protein MTH_249 n=1 Tax=Methanot... 99 2e-19 UniRef50_B0N5S7 Putative uncharacterized protein n=2 Tax=Bacteri... 99 2e-19 UniRef50_A6VUC5 KpsF/GutQ family protein n=12 Tax=Bacteria RepID... 99 2e-19 UniRef50_C3RLV2 Predicted protein n=2 Tax=Bacteria RepID=C3RLV2_... 99 2e-19 UniRef50_D2Q6J1 Sugar isomerase or sugar amino transferase n=6 T... 99 2e-19 UniRef50_C8S7V2 6-phospho 3-hexuloisomerase n=1 Tax=Ferroglobus ... 99 2e-19 UniRef50_B1C5Y4 Putative uncharacterized protein n=1 Tax=Anaerof... 99 2e-19 UniRef50_B0RAL7 6-phospho-3-hexuloisomerase n=3 Tax=Micrococcine... 99 2e-19 UniRef50_C3WG43 SIS domain-containing protein n=1 Tax=Fusobacter... 98 3e-19 UniRef50_A7MI97 Putative uncharacterized protein n=3 Tax=Enterob... 98 3e-19 UniRef50_C1I4S5 Putative uncharacterized protein n=1 Tax=Clostri... 98 3e-19 UniRef50_Q8TUU0 Predicted sugar phosphate isomerase n=1 Tax=Meth... 98 3e-19 UniRef50_B5S7Q3 Putative uncharacterized protein (Fragment) n=1 ... 98 3e-19 UniRef50_B1LR09 Sugar isomerase, KpsF/GutQ family n=21 Tax=Bacte... 98 3e-19 UniRef50_C1ZGN7 KpsF/GutQ family protein n=1 Tax=Planctomyces li... 98 4e-19 UniRef50_A6DIX0 Glucosamine-fructose-6-phosphate aminotransferas... 98 4e-19 UniRef50_Q723E8 SIS domain protein n=15 Tax=Firmicutes RepID=Q72... 98 4e-19 UniRef50_B5G8P1 Transcriptional regulator (Fragment) n=1 Tax=Str... 98 4e-19 UniRef50_C5A3S6 Glucosamine--fructose-6-phosphate aminotransfera... 98 4e-19 UniRef50_D1Y338 Arabinose 5-phosphate isomerase n=1 Tax=Pyramido... 98 4e-19 UniRef50_B1L733 Glucosamine 6-phosphate synthetase n=1 Tax=Candi... 98 4e-19 UniRef50_D2RHI3 6-phospho 3-hexuloisomerase n=1 Tax=Archaeoglobu... 97 5e-19 UniRef50_C2DAE3 3-hexulose-6-phosphate isomerase n=7 Tax=Enteroc... 97 5e-19 UniRef50_Q1QAN2 KpsF/GutQ family protein n=2 Tax=Psychrobacter R... 97 6e-19 UniRef50_C4X1H8 Putative uncharacterized protein n=3 Tax=Klebsie... 97 6e-19 UniRef50_A4FI47 Transcriptional regulator, RpiR family n=2 Tax=P... 97 6e-19 UniRef50_A1RZ63 Glutamine amidotransferase, class-II n=1 Tax=The... 97 6e-19 UniRef50_Q4J6D9 Glucosamine--fructose-6-phosphate aminotransfera... 97 6e-19 UniRef50_C9AU51 Predicted protein n=2 Tax=Enterococcus casselifl... 97 7e-19 UniRef50_Q028G3 Glutamine--fructose-6-phosphate transaminase (Is... 97 7e-19 UniRef50_Q8RD35 N-acetylmuramic acid 6-phosphate etherase n=9 Ta... 97 8e-19 UniRef50_D0ALV4 Transcriptional regulator (Fragment) n=2 Tax=Ent... 97 9e-19 UniRef50_D1CIK3 Glutamine--fructose-6-phosphate transaminase (Is... 97 9e-19 UniRef50_UPI0001C35662 hypothetical protein ChatD1_20770 n=1 Tax... 96 1e-18 UniRef50_A8MC94 Glutamine amidotransferase class-II n=1 Tax=Cald... 96 1e-18 UniRef50_B9KZ32 Glucosamine--fructose-6-phosphate aminotransfera... 96 1e-18 UniRef50_A2SR80 Glutamine--fructose-6-phosphate transaminase n=5... 96 1e-18 UniRef50_C8WES2 KpsF/GutQ family protein n=3 Tax=Zymomonas mobil... 96 1e-18 UniRef50_C6XG05 Polysialic acid capsule expression protein n=1 T... 96 1e-18 UniRef50_C9D0H7 Putative transcriptional regulator RpiR family p... 96 1e-18 UniRef50_C6QLS8 6-phospho 3-hexuloisomerase n=2 Tax=Geobacillus ... 96 1e-18 UniRef50_D0ZGM2 Sugar isomerase (SIS) n=5 Tax=Enterobacteriaceae... 96 1e-18 UniRef50_C2KYX2 Glutamine--fructose-6-phosphate transaminase (Is... 96 1e-18 UniRef50_Q6ET44 Os02g0158300 protein n=7 Tax=Magnoliophyta RepID... 96 2e-18 UniRef50_C2JQK2 Phosphosugar-binding transcriptional regulator n... 96 2e-18 UniRef50_A4INF7 Predicted sugar phosphate aminotransferaseinvolv... 96 2e-18 UniRef50_Q03Y13 Sugar phosphate isomerase with CBS domains n=6 T... 95 2e-18 UniRef50_B5YDY2 Glucosamine--fructose-6-phosphate aminotransfera... 95 2e-18 UniRef50_Q6MA93 Putative Gut Q protein n=2 Tax=Parachlamydiaceae... 95 2e-18 UniRef50_Q1IND2 Sugar isomerase (SIS) n=2 Tax=Acidobacteria RepI... 95 2e-18 UniRef50_D1RBC9 Putative uncharacterized protein n=1 Tax=Parachl... 95 2e-18 UniRef50_D0RRD5 Arabinose 5-phosphate isomerase n=2 Tax=alpha pr... 95 2e-18 UniRef50_A6M2T4 Transcriptional regulator, RpiR family n=3 Tax=C... 95 2e-18 UniRef50_C4FAU5 Putative uncharacterized protein n=1 Tax=Collins... 95 2e-18 UniRef50_C9AU43 Putative uncharacterized protein n=3 Tax=Enteroc... 95 3e-18 UniRef50_Q9M1T1 Sugar-phosphate isomerase-like protein n=10 Tax=... 95 3e-18 UniRef50_A1SQL2 Glutamine--fructose-6-phosphate transaminase n=1... 95 3e-18 UniRef50_C9B1X5 Putative uncharacterized protein n=2 Tax=Enteroc... 95 3e-18 UniRef50_Q6GES3 Glucosamine--fructose-6-phosphate aminotransfera... 95 3e-18 UniRef50_C0R0I7 Glucosamine--fructose-6-phosphate aminotransfera... 95 3e-18 UniRef50_D1XPK8 Glucosamine/fructose-6-phosphate aminotransferas... 95 3e-18 UniRef50_Q8SRI2 Glucosamine--fructose-6-phosphate aminotransfera... 95 3e-18 UniRef50_C3WCJ9 Predicted protein n=1 Tax=Fusobacterium mortifer... 95 4e-18 UniRef50_A8F7W0 N-acetylmuramic acid 6-phosphate etherase n=2 Ta... 94 4e-18 UniRef50_B3SFH4 Putative uncharacterized protein n=1 Tax=Trichop... 94 4e-18 UniRef50_C2DAD6 3-hexulose-6-phosphate isomerase n=2 Tax=Enteroc... 94 5e-18 UniRef50_A3WGF3 CBS domain:Sugar isomerase (SIS):KpsF/GutQ famil... 94 5e-18 UniRef50_O28478 Uncharacterized protein AF_1796 n=1 Tax=Archaeog... 94 5e-18 UniRef50_C9KL97 N-acetylmuramic acid 6-phosphate etherase n=1 Ta... 94 5e-18 UniRef50_C9AA73 Predicted protein n=1 Tax=Enterococcus casselifl... 94 5e-18 UniRef50_C3RMD5 Transcriptional regulator (Fragment) n=2 Tax=Bac... 94 5e-18 UniRef50_C3RJC2 Predicted protein n=2 Tax=Bacteria RepID=C3RJC2_... 94 5e-18 UniRef50_Q8DJI6 Glucosamine--fructose-6-phosphate aminotransfera... 94 5e-18 UniRef50_O83833 Glucosamine--fructose-6-phosphate aminotransfera... 94 5e-18 UniRef50_Q88BX8 Glucosamine--fructose-6-phosphate aminotransfera... 94 6e-18 UniRef50_Q7MCJ0 Transcriptional regulator n=4 Tax=Vibrionaceae R... 94 6e-18 UniRef50_Q6MBL9 Probable glutamine-fructose-6-phosphate transami... 94 7e-18 UniRef50_Q048M7 Transcriptional regulator n=2 Tax=Lactobacillus ... 94 7e-18 UniRef50_Q9V249 Glucosamine--fructose-6-phosphate aminotransfera... 94 7e-18 UniRef50_D1B9X1 Glucosamine/fructose-6-phosphate aminotransferas... 94 7e-18 UniRef50_B2KEC3 Glucosamine/fructose-6-phosphate aminotransferas... 93 8e-18 UniRef50_C7LLH6 SIS domain protein n=3 Tax=Mycoplasma mycoides g... 93 8e-18 UniRef50_D2RNB9 Glucokinase regulatory-like protein n=3 Tax=Bact... 93 9e-18 UniRef50_A7VQ52 Putative uncharacterized protein n=1 Tax=Clostri... 93 9e-18 UniRef50_C0D3Y2 Putative uncharacterized protein (Fragment) n=1 ... 93 9e-18 UniRef50_P17115 Protein gutQ n=113 Tax=Gammaproteobacteria RepID... 93 1e-17 UniRef50_A3EU24 Glucosamine--fructose-6-phosphate aminotransfera... 93 1e-17 UniRef50_Q28KP2 N-acetylmuramic acid 6-phosphate etherase n=25 T... 93 1e-17 UniRef50_P14742 Glucosamine--fructose-6-phosphate aminotransfera... 93 1e-17 UniRef50_B5JQT0 Sugar isomerase, KpsF/GutQ family n=1 Tax=Verruc... 93 1e-17 UniRef50_Q821Z7 Glucosamine--fructose-6-phosphate aminotransfera... 93 1e-17 UniRef50_A3VAL1 Putative uncharacterized protein n=1 Tax=Rhodoba... 93 1e-17 UniRef50_Q6F6U8 Glucosamine--fructose-6-phosphate aminotransfera... 93 1e-17 UniRef50_C6HYL9 Glucosamine--fructose-6-phosphate aminotransfera... 93 1e-17 UniRef50_A8F9E0 N-acetylmuramic acid 6-phosphate etherase n=2 Ta... 93 1e-17 UniRef50_Q47U25 N-acetylmuramic acid 6-phosphate etherase n=1 Ta... 93 1e-17 Sequences not found previously or not previously below threshold: UniRef50_Q1IT00 Glutamine--fructose-6-phosphate transaminase n=7... 105 2e-21 >UniRef50_Q8R7I8 Transcriptional regulator n=3 Tax=Firmicutes RepID=Q8R7I8_THETN Length = 285 Score = 239 bits (610), Expect = 9e-62, Method: Composition-based stats. Identities = 81/281 (28%), Positives = 154/281 (54%), Gaps = 5/281 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N +L+I+ Y L ++KK+ADY+L ++ +LS +LA + G ++++V+F +++G Sbjct: 8 NVILKIQSIYNSLTNAEKKVADYVLENAESVIYLSITELAEKCGTGETTIVRFCRRIGLS 67 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF KL L++ +A P IH I +DPL ++ +K+ ENT A+ T+ + S + Sbjct: 68 GFQEFKLNLAKEIA----EPETSIHENISFNDPLDVLVQKITTENTLAISNTVKLLSMSE 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + V + +AR+I G+GASG A + +K M++G N A D H + + + D Sbjct: 124 LEKAVDAIINARKIQFYGVGASGYTALDAKYKFMRLGLNVDANLDAHIQAISAVSLTDKD 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS++G ++ G +V+AIT + + + A L T A+E S + Sbjct: 184 VAVGISFSGSTKDTVETCRLAKEAGARVIAITNYARSPITSVADIVLLTSAKETPLRSGA 243 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHS-EALVKKL 281 +++ AQ + D+L+ A+ + + A + + + +A+++KL Sbjct: 244 LTSKIAQLHILDILYTAVAVKLKDKAVQELNKTAKAVLEKL 284 >UniRef50_C7MQM6 Transcriptional regulator, RpiR family n=5 Tax=Actinomycetales RepID=C7MQM6_SACVD Length = 333 Score = 237 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 77/278 (27%), Positives = 132/278 (47%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L+RIR GLA++++++A +L P + S ++A A S+++V +F + +G Sbjct: 38 SPLVRIRSLLPGLARAEQRVAKVVLEDPSSVARRSITEVAMAAKTSETTVTRFCKAIGVG 97 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L++AL+ A S + I DD L V K+ + A+ T + Sbjct: 98 GYPQLRIALAADTARTEAKSSRDLGGDITADDDLASVVSKVSFADARAVEETAEQLDIAE 157 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L +L A R+ + G+GAS VA + KL +IG + A D H +L + S D Sbjct: 158 LTRVTELLAEATRVDVYGVGASAFVAADLQQKLHRIGRVSFAWSDTHIMLTSAAVLSEGD 217 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + +AIS++G + A G +AIT F + + A H L T A E S + Sbjct: 218 VAVAISHSGATTDTVEALRVAKEHGATTVAITNFPRSPIASVADHVLTTAARETTFRSGA 277 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ AQ + D LFI + Q+ ++ + + + V Sbjct: 278 TASRIAQLTVIDCLFIGVAQRRMDESMAALEATREAVN 315 >UniRef50_C6WFA6 Transcriptional regulator, RpiR family n=2 Tax=Actinomycetales RepID=C6WFA6_ACTMD Length = 304 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 79/277 (28%), Positives = 131/277 (47%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L++IR GLA++++++A +L P T H S ++A AG S+++V +F + +G Sbjct: 9 SPLVKIRSLLPGLARAEQRVAKVVLDNPATVAHRSITEVAESAGTSETTVTRFCKAIGVG 68 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L++AL+ A + I D LR V K+ + A+ T + + Sbjct: 69 GYPELRIALAADTARTAARTDRDLGGDIGPGDDLRQVVGKVAFADARAVEETAEQLNVDT 128 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V + A R+ + G GAS VA + KL +IG A D H L + + D Sbjct: 129 LQAVVDAVARAGRVDVYGFGASAFVAFDLQQKLHRIGRTCFAWNDTHIALTSAAVLTGAD 188 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS+TG E A G +A+T F + + + A H L T A E S + Sbjct: 189 VAVGISHTGSTTETVEALRVARERGATTVALTNFPRSPISEVADHVLTTAARETTFRSGA 248 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +++ AQ + D LFI + Q +E A + + V Sbjct: 249 MASRIAQLTVVDCLFIGVAQHHVESATSALEATYDAV 285 >UniRef50_A4F6M8 RpiR-family transcriptional regulator n=7 Tax=Actinomycetales RepID=A4F6M8_SACEN Length = 308 Score = 229 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 79/277 (28%), Positives = 136/277 (49%), Gaps = 1/277 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L+RIR GLA++++++A+ +L P + S ++A AG S+++V +F + +G Sbjct: 14 SPLIRIRSLLPGLARAEQRVANIVLADPASVARRSITEVAEAAGTSETTVTRFCKAIGVG 73 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L++AL+ A + S + + I +D +R + EK+ + A+ T + E Sbjct: 74 GYPDLRIALAADTA-RTSSRDRDLGSDIGPEDDVRKIIEKVSYADAKAVEETADQLDAET 132 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V + ARRI + G+GAS VA + KL +IG A D H L + D Sbjct: 133 LRSLVDAVARARRIDVYGVGASAFVALDLQQKLHRIGLTCFAWSDTHNALTSAAVLREGD 192 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS+TG E A E + G A+T F + + + A H L T E S + Sbjct: 193 VAIGISHTGATTETVEALQEAGKRGATTAALTNFARSPITEVADHVLTTAVRETTYRSGA 252 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +++ Q + D LFI + Q+ L+ + + V Sbjct: 253 MASRIGQLTVIDCLFIGVAQRHLDQTKAALEATYEAV 289 >UniRef50_C0ZD50 Transcriptional regulator n=32 Tax=Bacillales RepID=C0ZD50_BREBN Length = 288 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 69/277 (24%), Positives = 138/277 (49%), Gaps = 3/277 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L ++R Y L+ ++++ADY+L H S +LA++ + ++V + ++LG++G Sbjct: 11 VLTQLRAIYTQLSGKEQQIADYILEHASEIIHFSITELADQCQCADATVFRLCRRLGFRG 70 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + A K+AL+ + + ++ I+ DD + + EK+ N + T + ++++L Sbjct: 71 YQAFKIALASEVTNPKQTIHQEINLD---DDDVSAIAEKIFTANIETIRDTQQIINKDEL 127 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V+ L +A RI G G S ++AQ+ K M+ G D H + + + + Sbjct: 128 MKIVSCLENASRIEFYGSGGSAVIAQDAYHKFMRTGIPCLYHSDAHYQVMSASLLTKGAV 187 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ IS++G +++ A G K + IT + + L + A CLYT + E + ++ Sbjct: 188 VVGISHSGSNKDILAALQVAKEAGAKTIGITSYGKSPLVRLADMCLYTTSRETVFRTEAL 247 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S+ AQ L DLL++A+ + E I+H + Sbjct: 248 SSRLAQLSLIDLLYVAVSLRRQEDTIANIQHIREAIS 284 >UniRef50_B8E0M8 Transcriptional regulator, RpiR family n=2 Tax=Dictyoglomus RepID=B8E0M8_DICTD Length = 281 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 75/277 (27%), Positives = 139/277 (50%), Gaps = 4/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +I+++ + S++K+A+Y+L + HL +LA GVS++++V+ +KLG + Sbjct: 4 SILEKIKEQKESFRDSEEKVANYILARWQEVLHLPITELAERIGVSEATIVRMCKKLGLR 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+AL+ P +H ++ D L + +K+ N AM +TLNV S ++ Sbjct: 64 GFQELKIALATE----KIQPIKTVHQAVQEGDDLETILKKVFSANIRAMESTLNVISVKE 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + + +AR++ + G+G SG VA + K MK G A D H + + P D Sbjct: 120 IERAIDAILNARQLQIYGVGGSGPVALDAQHKFMKTGIPTVAYIDSHMMAMSASILEPQD 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++ IS +G +++ A + G + IT + L + L +EE + S Sbjct: 180 VVIGISASGSSKDIFEALELAKNRGATTIGITHYAKTPLDRVLDIKLSVSSEETFYRTES 239 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 SA AQ + D L+I + + L+ E ++ + + Sbjct: 240 TSARIAQLSIIDTLYIGVALKRLDKMIENLKLTREAI 276 >UniRef50_UPI0001788119 transcriptional regulator, RpiR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788119 Length = 278 Score = 224 bits (570), Expect = 3e-57, Method: Composition-based stats. Identities = 74/278 (26%), Positives = 140/278 (50%), Gaps = 4/278 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L+R+R+ Y L S++K+A ++L +P +S LA +G SQ+++V+ + +G+KG+ Sbjct: 5 LVRLREVYDSLNPSERKVAAFILQEPAEMIQMSVADLAVRSGSSQAAIVRLCKTMGFKGY 64 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 LKL ++ + P + IR +D + + + + N ++ T+ + E + Sbjct: 65 QDLKLKVAGD----LQEPLATGYQDIRPNDSISAIIQNVSNNNIQSIRDTMKIMEEGMVE 120 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 E V L ++RI + G+GAS L+ + K ++I + D H L + +PDD Sbjct: 121 EAVLALDQSKRIFMFGVGASNLIGMDAQQKFLRINKVCISFPDPHVQLTSAVLLTPDDAA 180 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + ISY+G E+ AA G K + IT + + L + LYT + E S ++S Sbjct: 181 VCISYSGETDEVIRAAAIAKEKGCKTIGITKYGDSTLSRSVDIPLYTSSTENEIRSGAMS 240 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + Q L D+L++ + ++ E + + + S +K+L Sbjct: 241 SRITQLNLIDILYLGVASRNYENSVKYLDESRRAIKRL 278 >UniRef50_UPI000196C77F hypothetical protein CATMIT_02718 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196C77F Length = 277 Score = 221 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 73/281 (25%), Positives = 148/281 (52%), Gaps = 6/281 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + RI++ L +++K++A Y++ P+ S+ +L + S ++VV+FA+KLGY Sbjct: 1 MSCITRIKEA--SLTETEKEIAQYIIEHPEQVLDDSAMKLGEKTHSSSAAVVRFAKKLGY 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GFP LK+ L++ L + N + D+ + + K+ + T ++ S Sbjct: 59 SGFPQLKIELAKDLVGSIPE----VDNLLHPDEDMATLMNKVHHSQIVTIDKTYHLLSAS 114 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V L A+ + L G+G S +V +F KLM+IG A D+H + +V + + Sbjct: 115 TLEDVVKALEQAKHVYLFGVGGSAIVCDDFIHKLMRIGKYACFYPDVHLQMTSVPNMTEE 174 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL + +SY+G + + AA + +AIT N L + H L ++EQ+ Sbjct: 175 DLAIFVSYSGETKGIVTAAKWAKEMNIPSVAITQSAYNKLGKLVDHVLTIPSQEQSLRIG 234 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++S+ ++ ++ DLL+ L++++ E ++I ++ +++++ Sbjct: 235 AMSSRYSSLIVVDLLYYGLVKRNKEKYAQKIINTRRIIQEM 275 >UniRef50_C5CIM2 Transcriptional regulator, RpiR family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CIM2_KOSOT Length = 283 Score = 221 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 4/281 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LL I +++KK+A +++ P ++S ++++ VS+ S+V+F QKLGY Sbjct: 6 NVLLTIETLKDSFTKTEKKIATFVVKNPQKVVYMSLTEVSDILKVSEGSIVRFCQKLGYT 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF K+AL+ S L + + + + + T SEE Sbjct: 66 GFHPFKIALA----VSENQESFSSSEFDFNSRDLSSLKNYVAQRHIDVIKNTSEFISEEI 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L CV + +AR I+++G+GASG A + +K M+IG N D H D Sbjct: 122 LEACVEKILTARTILISGVGASGNTAHDAFYKFMRIGLNCKTSHDAHIQAMIASELREGD 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +LLAIS +G E+ AD + G V+AITG+ + L + A H L T E S + Sbjct: 182 VLLAISQSGSTLEIVDIADIARKGGATVIAITGYARSPLARFAHHVLLTPTRESPFESGA 241 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 + + AQ + +LLF A+ + E + I + V K + Sbjct: 242 LRSKIAQLYVLELLFTAVFHRMEEKGRKFIERTADSVAKWI 282 >UniRef50_C6Q8T9 Transcriptional regulator, RpiR family n=1 Tax=Thermoanaerobacter mathranii subsp. mathranii str. A3 RepID=C6Q8T9_9THEO Length = 282 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 69/278 (24%), Positives = 127/278 (45%), Gaps = 4/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L I++ S+ K+A Y+L D LS +LA S++S+V+F + +G K Sbjct: 3 DILTVIKELEATFKPSEAKIAKYILDNADVVTELSINELARACDTSEASIVRFCRTIGLK 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ ++ + + I DD + V +K+ N A+ T+++ + Sbjct: 63 GFQELKIKIA----VSLSKQTKKLDGGITDDDDVSDVIQKIANFNKQAIDNTISLLDVKS 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V L +A +I G+ ASG VA + K +I A +D H L + D Sbjct: 119 IIKAVDALSNANKIDFYGVAASGTVAYDAMLKFARINIPCTAYQDTHLQLTSAANLKKGD 178 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + ISY+G RE+ A + G +++T F L + A L+ +EE S + Sbjct: 179 VAFGISYSGCTREIVEALEVAKEAGATTISLTKFGQFPLVKVADINLFVSSEEPLFRSGA 238 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ AQ + D+LFI + ++ + + ++ + Sbjct: 239 TASRIAQLTVIDILFILVAKRKYNDVVKFLENTTEALS 276 >UniRef50_A8FJ30 Possible RpiR family transcriptional regulator n=51 Tax=Bacillus RepID=A8FJ30_BACP2 Length = 285 Score = 219 bits (559), Expect = 7e-56, Method: Composition-based stats. Identities = 65/277 (23%), Positives = 136/277 (49%), Gaps = 3/277 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 + +IR +GL K +A+++ +P HLS +LA + S++++ + ++LG++GF Sbjct: 9 IEKIRAASRGLPPKLKAIAEHITSEPRDIIHLSIVELAKKTASSEATIFRLCKRLGFEGF 68 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 LK+A+++ + ++ + ++ DD + + +K+ + N +A+ + + + E + Sbjct: 69 QDLKIAIAQEI---DQTKPNYVDEEMSLDDDMAVFMQKVFQTNISALKDSFQLLNPEDVE 125 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 + + ++ A+R+ G G SGL+A + K M+ G N D H + + Sbjct: 126 KAIQIIHEAKRLEFYGSGGSGLIATDAFHKFMRTGINCIVHTDSHFQAMSAGLLDQHSTV 185 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + IS++G ++L A G K + IT + + L Q A LYT +E A + ++S Sbjct: 186 IGISHSGRNKDLLDAMKTAKSKGAKTIGITSYQRSPLSQLADVTLYTATQETAFRTEAMS 245 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A AQ + D+L+ AL + ++ + + Sbjct: 246 ARLAQLTVIDVLYFALAHLRQQETITNLKQMRETISQ 282 >UniRef50_C5C2G7 Transcriptional regulator, RpiR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C2G7_BEUC1 Length = 285 Score = 218 bits (556), Expect = 1e-55, Method: Composition-based stats. Identities = 70/283 (24%), Positives = 133/283 (46%), Gaps = 2/283 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ I+ R A S +++A+ +L +P + +LA++ S++++V+F + LG Sbjct: 1 MSIQSSIQSRLDQFAPSMRRVAEAILERPQVVLEKTISELASQCETSETTIVRFCRTLGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHN--QIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 G+ L+L L+ + + + I +D L + K+ +T + TL Sbjct: 61 TGYVQLRLELATEIGRENAQRGELGDHGADILAEDGLAAMAAKIAFTDTLGIEETLASLD 120 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 E L V + +A R + G+G+SG A + KL +IG A D H + SS Sbjct: 121 IEHLERVVDAIDTAGRSVTYGVGSSGSSAADLQRKLFRIGRVAFTFDDPHDAVTAAALSS 180 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P D+ +A S++G RE + G + +A+T +AL + A L T E Sbjct: 181 PGDVAVAFSHSGATREALAFLATAGKHGARTVAVTNSAESALARAADIVLVTSVRETQFR 240 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S ++++ AQ M+ D +F+ + Q+ + + ++ + A ++L Sbjct: 241 SGAMASRIAQLMIVDCIFVGVAQRRYDQTVDALKSTYAAAQEL 283 >UniRef50_Q1LPJ6 Transcriptional regulator, RpiR family n=6 Tax=Burkholderiaceae RepID=Q1LPJ6_RALME Length = 338 Score = 218 bits (556), Expect = 1e-55, Method: Composition-based stats. Identities = 68/278 (24%), Positives = 127/278 (45%), Gaps = 5/278 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RI Y L S+++LADY+ + L+ +LA+ AGVSQ ++ +F LGY G Sbjct: 1 MRDRILAVYDSLRPSERRLADYVARHGASVIRLTMPELADRAGVSQPTIARFCAALGYDG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F KL ++ + + +H + DD + K+ A + + N S +++ Sbjct: 61 FKEFKLQFAQNVGGG----TPFVHQDVEADDRPADIAGKVFDRTIATLMSVRNALSADQI 116 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + +L ARRI G G SG+VA + K ++G A D H + P D+ Sbjct: 117 EHGIRLLAGARRIEFYGCGNSGIVALDIQHKFFRLGIPTTAYSDPHVFSMSAALLRPGDV 176 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + +S +G ++ AA G VLA+T + + L + A C+++ EE + + Sbjct: 177 AVLVSNSGRTWDMLTAATLARSSGASVLALT-HSGSPLARLADVCVFSDVEEDSEVYTPM 235 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ +L D+L + + ++ ++A +++ Sbjct: 236 TSRICHLVLGDVLAAGVALDRADSVAAGLQRAKAHLRE 273 >UniRef50_A7GD47 Transcriptional regulator, RpiR family n=10 Tax=Clostridium RepID=A7GD47_CLOBL Length = 281 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 83/281 (29%), Positives = 146/281 (51%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M LLRIR+ + + +S+KK+A+Y+ P S+Q++A + S +S+++F +K+GY Sbjct: 1 MGVLLRIRENFDSMTKSEKKIAEYIFKSPKDIISDSAQEIAIKTSTSPASIIRFTKKVGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 K AL ++ S I +D + + KL + + T + +E Sbjct: 61 NSLNEFKFALVAEEYTKE---STEFDYIINYNDSIDSIINKLGNKVIDTINDTKELVDDE 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 KL E V +++A I L G+GAS +VA +F +KL++I +D H LA + Sbjct: 118 KLLEAVKAIKNAETIYLYGVGASAMVAMDFQYKLLRINKKVMFQQDSHLQLAVSVHITNR 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ +AISY+G RE+NLA +E + G +AIT + L A L + E+ Sbjct: 178 DVAVAISYSGNTREVNLAVEEAKKNGATTIAITKCGKSILSNIADINLNIPSIEKDLRIG 237 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +IS+ +Q +TD LF+ + +++L+ + + ++ LV+ L Sbjct: 238 AISSRTSQLFVTDSLFLGIAKENLDKTEKNLINTRNLVEVL 278 >UniRef50_C0CSK7 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CSK7_9FIRM Length = 282 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 61/279 (21%), Positives = 119/279 (42%), Gaps = 4/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + IR R L +++K+A+Y+L D + + +LA A VS +SVV+F + LGYK Sbjct: 5 SCKEIIRGRMNYLTNTERKIANYVLENYDQVLNSNITELAENAKVSDASVVRFCRSLGYK 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ K+ ++ + + ++ + D ++ K+ + + TL + + Sbjct: 65 GYQDFKINAAKDVLPR----EKHLNPILEESDSPDMICHKIFNLEISVLERTLASLNMRE 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + + +R++ G G S LV Q+ K MKIG D L + D Sbjct: 121 VEKAAQFIFHGKRVLFFGSGGSLLVGQDALHKFMKIGVQVYVHEDRDLQLMASSLAGEGD 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++ IS++G + G + +A+ L + A + T +EE S S Sbjct: 181 VVIGISHSGSNYSVLRCLKNAKENGAQTIALVSRGKTPLSKIADVVIDTASEETIFQSES 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +S AQ + D L + + + + I+ + + Sbjct: 241 VSTRIAQLAIIDSLVSIVAFMNYDESYRAIQKTRKATSE 279 >UniRef50_B4EZY5 RpiR-family transcriptional regulator n=54 Tax=Gammaproteobacteria RepID=B4EZY5_PROMH Length = 295 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 72/279 (25%), Positives = 126/279 (45%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L + L + +++ADY+L P LS QL+ +++VV+F + LGYK Sbjct: 13 KILDTLGAMKNSLTRVSQRIADYILFHPTEVTQLSIAQLSQATKAGEATVVRFCRTLGYK 72 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF K+ L+ +A+ S + ++ D + +G KL + TLN+ ++ Sbjct: 73 GFQDFKMDLAIEMATSDNDESPILDAEVSHQDDIHTIGLKLQATINNVLSETLNLLDMQQ 132 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V L SA + + G+G+SG+ A++ KLM+IG+ AV + H + D Sbjct: 133 VQGAVNALLSANYVFICGVGSSGITAEDLKNKLMRIGYRVDAVTNNHFMYMQASLLKSGD 192 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS++G E A G +A+T + + + A H L + S Sbjct: 193 VAIGISHSGNSLETVHALKLAKEAGASTIALTHNLGSQIMEYADHHLINGNRQGKLQGDS 252 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 I AQ + DLL+ L+Q E E+ + +K+ Sbjct: 253 IGTKTAQLFVLDLLYTLLVQAKPETVKEQKLRTLNALKQ 291 >UniRef50_Q8RD36 Uncharacterized HTH-type transcriptional regulator TTE0211 n=3 Tax=Clostridia RepID=Y211_THETN Length = 282 Score = 217 bits (554), Expect = 2e-55, Method: Composition-based stats. Identities = 69/278 (24%), Positives = 131/278 (47%), Gaps = 4/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L IR+ S+ K+A Y+L P LS +LAN S++S+++F + +G K Sbjct: 3 DVLAVIREMSSSFTPSEAKIAKYILENPTVVTELSVNELANACDTSEASIIRFCRTIGLK 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ ++ + + I +D + V +K+ N A+ +T+ V + E+ Sbjct: 63 GFQELKIKIA----VSLAKQTRKLDGGITSEDDVMAVIQKIANFNKQAIDSTIAVLNAEE 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + L +A +I G+ ASG+VA + K +I A +D H L + D Sbjct: 119 LTKAAEALANANKIDFYGVAASGVVAYDAMLKFSRINIPCTAYQDTHLQLTSAVNLKKGD 178 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + ISY+G +E+ A G +++T + + L + A L+ +EE + + Sbjct: 179 VAFGISYSGATKEIVEAIQTAKEAGATTISLTKYGQSPLAKAADINLFVSSEEAMFRAGA 238 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +++ AQ + D+LFI + Q+ + ++ ++ Sbjct: 239 MASRIAQLTVIDILFILVAQKKYNDVVRYLENTSEVLS 276 >UniRef50_A8S9N1 Putative uncharacterized protein n=3 Tax=Bacteria RepID=A8S9N1_9FIRM Length = 321 Score = 217 bits (553), Expect = 4e-55, Method: Composition-based stats. Identities = 71/274 (25%), Positives = 140/274 (51%), Gaps = 1/274 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LLR+R+ L+ +++++A ++L PD L+ + LA + S SSVV+ + +G++ Sbjct: 36 NVLLRLREVQPSLSSTERQIAQFILENPDETTTLTIRDLARRSFSSPSSVVRICRVIGFQ 95 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ L+ AL+ + I D L+ + +K+ +N ++ T + ++ Sbjct: 96 GYKELRHALTLE-LATLGENGSHREKDITPQDSLQEIVDKVTHKNIQSLLDTQRLLLLDE 154 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L +CV ++ +AR ++L GIG+S VA++ K +++ D H+ L + ++ D Sbjct: 155 LEQCVELIANARTVLLFGIGSSLCVAKDTYLKFLRLDKPCVVNEDSHSQLLQARNATAQD 214 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + SY+G E+ EM G V+A+T + P+ + Q A H LY A E + + Sbjct: 215 VGIVFSYSGQTMEMIQCIKEMKAGGAPVIAVTRYYPSEVAQLADHVLYVAANESLFRNGA 274 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 +S+ +Q + D+L+ A ++ E R+ + Sbjct: 275 MSSRLSQLNVVDILYTAYASRNHEDTMRRLTKTH 308 >UniRef50_D2AR91 Putative transcriptional regulator, RpiR family n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AR91_STRRD Length = 299 Score = 216 bits (551), Expect = 5e-55, Method: Composition-based stats. Identities = 71/281 (25%), Positives = 139/281 (49%), Gaps = 2/281 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + +R L + + +A +L P + + + +G S++++V+ A+ LG+ Sbjct: 11 NLVATVRAVLPSLTPAAQAIARLILDDPGMVARSTITEFSAVSGTSEATIVRTARALGFA 70 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ L+ AL+ A+A + VP + DDPL V K+ + + A+ T + ++ Sbjct: 71 GYSQLRFALAAAVAREEPERLVPGD--LGPDDPLTDVIAKVTRAESEALADTAAQLNPDR 128 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V + +ARR+ + G+GASGLVA + A KLM+IG ++ A D H L + D Sbjct: 129 LGAVVEAMTAARRVDVYGVGASGLVAADMAQKLMRIGRSSHAFTDAHLALTSAALLGEGD 188 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + +S TG ++ + G +AIT ++L + A H L + E A + Sbjct: 189 VTVGVSCTGETPDVIAPMRVARKAGATTVAITNNPRSSLAELAEHVLVSAGRETAFRPGA 248 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 +++ +Q ++ D +F+ + Q+ E + +R + + + + Sbjct: 249 LASRISQLLIVDCIFVGIAQRTFETSDAALRATRGALDEFM 289 >UniRef50_Q97MK5 Uncharacterized HTH-type transcriptional regulator CA_C0191 n=5 Tax=Clostridia RepID=Y191_CLOAB Length = 283 Score = 216 bits (550), Expect = 7e-55, Method: Composition-based stats. Identities = 70/273 (25%), Positives = 131/273 (47%), Gaps = 2/273 (0%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L+RI++ L S++K+A+Y+L LS ++LA ++G S+S+VV+ + L YKG+ Sbjct: 5 LIRIKEIINDLNPSERKIAEYILNNSKAISDLSIKELAGKSGSSKSAVVRLCKILNYKGY 64 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 ++A+++ + I D L + + + N ++ T+ V SEE + Sbjct: 65 KEFRIAIAKDTV--NVDKEENRYTDINPKDDLHTIIKNISYNNKKSIDNTMEVLSEELVE 122 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 + + A R+ GIGAS +VA + K M+I N A D H + D+ Sbjct: 123 KASEAISKAYRVDFYGIGASYIVAMDAFQKFMRINKNVRATPDTHLQVEFASNLKKGDVA 182 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 +AISYTG ++ + G +++T F N++ L+ ++ E S ++S Sbjct: 183 VAISYTGETKDTFESIKAAKEAGATTISVTKFGSNSISDLCDINLFVLSPEITFRSGAMS 242 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + AQ + D+LF ++ + E E + ++ Sbjct: 243 SRIAQLNVIDILFTSVAGRMFEEVKEFLENTRK 275 >UniRef50_A9KIQ0 Transcriptional regulator, RpiR family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KIQ0_CLOPH Length = 284 Score = 216 bits (550), Expect = 8e-55, Method: Composition-based stats. Identities = 60/277 (21%), Positives = 122/277 (44%), Gaps = 1/277 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RI Y +S+K +AD++ P+ + S LA GV ++V +F + L G Sbjct: 5 IFARIESSYSKFTKSEKIVADFVFENPEKVLYTSITDLAEICGVGDTTVFRFCKALKLNG 64 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + K+ L++ +A + I+ + DD ++ + +K + + AA+ T + E + Sbjct: 65 YQEFKMFLAQDIAVR-TGSDYTINGSVSQDDDIQTICKKALAVDIAALTETFEGLNFEAV 123 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V M+ +A ++ G+G+SG++A K M+I N + D H + S DL Sbjct: 124 TKVVDMISNANKVQFFGMGSSGVIALEAKMKFMRILPNVEHIADCHMQFMSAALLSSRDL 183 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + SY+G ++ A+ G KV++IT + + L + + + E + + Sbjct: 184 AIIFSYSGSTKDSIEIANLAKSNGCKVVSITRYVNSHLANISDVVIPCGSNEGPLDGGAS 243 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S Q + D+L++ + + + + Sbjct: 244 STSMVQFYILDILYLLYFTKHYHQSKLNKAKTTESIS 280 >UniRef50_A4TMJ1 RpiR-family transcriptional regulatory protein n=22 Tax=Gammaproteobacteria RepID=A4TMJ1_YERPP Length = 292 Score = 215 bits (549), Expect = 9e-55, Method: Composition-based stats. Identities = 72/279 (25%), Positives = 129/279 (46%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L + L +S +++A Y+L QP LS L+ ++++++F + LGYK Sbjct: 12 KILDALGAMQNSLTRSAQRIAAYILAQPAQVTQLSIADLSALTQAGEATIIRFCRTLGYK 71 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF K+ L+ +A++ S + + ++ D +G KL + TLN+ S E Sbjct: 72 GFQDFKMDLAIEVATRHNSENSLLDADVQEGDDTLAIGSKLQSAINNVLSETLNLLSIES 131 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V +LR A RI + G+G+SG+ A++ KLM+IG A + H + +P D Sbjct: 132 VEQVVKVLRPADRICIFGVGSSGITAEDAKGKLMRIGLRVDAATNNHFMYMQASLMNPGD 191 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS++G E A G +A+T + + + A + L + S Sbjct: 192 VAIGISHSGTSAETVQALKLAKEAGATTVALTHNMGSRITELADYVLINGNRQGQLQGDS 251 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 I AQ + DL++ L++ D A R + V + Sbjct: 252 IGTKIAQLFVLDLIYALLVKADPAQAESIKRKTTQAVSQ 290 >UniRef50_C4V1J5 RpiR family transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1J5_9FIRM Length = 282 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 118/278 (42%), Gaps = 4/278 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L I + L +S+KK+A+Y+L P+ + +LA G S +S+V+F + G KG Sbjct: 6 FLQLIEDKLGTLTKSEKKIAEYILEHPNRVVDATITELAERIGTSDASIVRFCKLFGCKG 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + K+ L+ + ++ + D + +K+ A ++ TL + + E L Sbjct: 66 YQNFKIRLAREVV----PHYKQLNVALEQHDTALTICQKIFNTEIATLHETLEMLNVEHL 121 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 +R A I + G G S +VAQ+ K +K+G + D + D+ Sbjct: 122 QTMAQRIREADYIEVFGSGGSSVVAQDIRHKFLKVGIRCTVLLDADIQAMSASLLKKGDV 181 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + IS+TG + + + G V+ +T + + + A + ++E S S Sbjct: 182 AIGISHTGSTKSVFHCLKMARKNGAYVILLTTQAKSPIGRIADLVIPVGSKETLFKSEST 241 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 SA A+ ++ D + + D + +I + + Sbjct: 242 SARIAELVVMDAVLALAVSDDYKKYNVKITKTRDATSE 279 >UniRef50_P44540 Uncharacterized HTH-type transcriptional regulator HI0143 n=33 Tax=Gammaproteobacteria RepID=Y143_HAEIN Length = 288 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 76/277 (27%), Positives = 138/277 (49%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L +I YQ L +S+KK+AD +L PD S ++A V ++++V+F + +G+K Sbjct: 6 NVLNKIGSLYQSLTKSEKKIADTILRSPDLVSQCSLSEIAKHLQVGEATLVRFCRTIGFK 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF KL LS LA++ + +I D + +KL M T+N+ ++ Sbjct: 66 GFSEFKLELSIELATKDNQDESILETEIMPSDDSLTIAQKLQTAVANVMEETINLLDLKQ 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L E V +L+ ARRI L G+G+SG+ A++ KLM+IGF A + H + + D Sbjct: 126 LEEVVKVLKKARRIFLFGVGSSGVTAEDAKNKLMRIGFQVDASGNNHFMYMQAALLTSSD 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + +S++G E + G +A+T + + + A + L ++ S Sbjct: 186 VAIGLSHSGYSAETAHTIKIAKQNGATTVALTHSLRSPVTEYADYVLVNGNKQGKLQGDS 245 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 I AQ + DL++ L+Q + ++A + + + ++ Sbjct: 246 IGTKIAQLFVLDLIYALLVQGEEDIAAQTKQKTLNVI 282 >UniRef50_C4L752 Transcriptional regulator, RpiR family n=4 Tax=Bacillales RepID=C4L752_EXISA Length = 282 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 80/279 (28%), Positives = 146/279 (52%), Gaps = 4/279 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MNG RIR Y L++ ++++ADY+L QP+ H + Q+A++ V++S+V +F Q++G+ Sbjct: 4 MNGTARIRGAYSTLSKKEQRIADYILKQPEQIIHHTINQVADDLDVAESTVFRFCQRVGF 63 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG+ ALK+AL+ + + + IH I D + EK+ N + +T + Sbjct: 64 KGYQALKIALASDVVAPLQ----DIHEDITETDTALEIAEKIFSTNGKTIESTRQILEGV 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V + ARRI G G S +VA + K ++ G +A+ + H L + + Sbjct: 120 SLEKAVELFLGARRIEFFGSGGSAVVALDAYHKFVRSGLQVSAMLESHMQLMSASQLTTA 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ + IS++G +E A + G ++AIT + + L + A LYT+++E A S Sbjct: 180 DVAVVISHSGASKETLDIAKLLKEKGVPMIAITNYAKSPLSKIADVSLYTVSQETAFRSE 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++++ A+ L D LF A++ + E A ++ + Sbjct: 240 ALASRIAELSLIDALFTAVMMRRGEAARTSLQQMREAIS 278 >UniRef50_A1HSQ6 Transcriptional regulator, RpiR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSQ6_9FIRM Length = 287 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 70/275 (25%), Positives = 134/275 (48%), Gaps = 4/275 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L RIR Y+ L ++++K+ADY+L HLS +LA +G +++++ + QK+GY+G+ Sbjct: 12 LPRIRSIYKALTKAEQKVADYILENAAKVVHLSITELAEVSGSAEATIFRLCQKVGYRGY 71 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 K+AL+ L +P+ ++ + D + ++ K+ + + TL + E L Sbjct: 72 QHFKIALAGDLY----TPAELVYKDVNAGDSMGVIARKVFHDINEGLQDTLKIIDEAALD 127 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 + V + ARRI G S ++A + ++ M+ G A D H + + P DL Sbjct: 128 KAVAAITKARRIDAYGSAGSAVIAADIEYRFMRFGIPVRAYADPHMQIISAALMQPGDLA 187 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 +A+S+TG R+L + + G V+AIT + + L + A L A+E S +++ Sbjct: 188 IAVSHTGANRDLLDSVAMAKQNGATVIAITSYMKSPLSKLADITLCGSAKETEYRSEAMA 247 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 A + D L++ ++ + E + + Sbjct: 248 ARLVHLAIVDALYVGVMLDRQDCIVENMEKIRKAI 282 >UniRef50_A0KFB6 Transcriptional regulator, RpiR family n=3 Tax=Gammaproteobacteria RepID=A0KFB6_AERHH Length = 286 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 101/284 (35%), Positives = 156/284 (54%), Gaps = 4/284 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L +I L+ S+ K+ADY+L P+ H SSQ+LA +A VSQSS+VKF QK+G+ Sbjct: 1 MLTLSKISNIRSQLSPSELKIADYILACPEQVTHFSSQELAQQADVSQSSIVKFTQKIGF 60 Query: 61 KGFPALKLALSEALASQPESPSVP---IHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 KGF A KLA+SE L + + ++N I DD L + +KL +E ++ T Sbjct: 61 KGFTAFKLAVSEDLGRKHAIKTDNVGDLYNGIGRDDDLETMAKKLAQEKINSIVETTQAL 120 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 L + ++ A R+ L GIG S L A++ +KL+KIG +D H ++ Q Sbjct: 121 DNATLARVLDVINQAGRVQLVGIGGSALTAKDLWYKLLKIGVTTLFAQDSHVQISIAQTL 180 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 P D+ L +SY+G R++ AA+ R G ++A+T F L+Q A L T+A+E Sbjct: 181 GPGDVQLVVSYSGASRDVLAAAELAKRNGATLIAVTSFRNTPLRQMADMVLDTVADENEL 240 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +SIS+ AQ +TD+LF+ L+Q+ + A I + + +L Sbjct: 241 RISSISSRTAQNTITDILFLGLVQRR-DEAWALIDGTRGAIDRL 283 >UniRef50_Q4LA29 Similar to transcriptional regulator n=1 Tax=Staphylococcus haemolyticus JCSC1435 RepID=Q4LA29_STAHJ Length = 283 Score = 214 bits (544), Expect = 3e-54, Method: Composition-based stats. Identities = 69/277 (24%), Positives = 135/277 (48%), Gaps = 2/277 (0%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L+ I L S++++A+Y+L PD + S Q+LA+ VS ++VV+ ++KL KGF Sbjct: 5 LIIIESSLSDLNPSERRVAEYILEHPDEIINYSVQKLADLTNVSVATVVRLSKKLKCKGF 64 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 LKL ++ + +I D + V + + NT + T + S E + Sbjct: 65 QDLKLKIA--YDLNEPGNIQRGYAEIDKDYSIEEVTQTVFHNNTKTLRDTERILSTENIK 122 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 ++ ++R+ + GIGAS L+AQ+F KL +I + + S +D++ Sbjct: 123 HAFELIVNSRKTCIYGIGASALIAQDFKQKLTRIDYWCDVGSSFDEQVTLSANLSSEDVV 182 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 +AIS +G +++ + G KV++IT + N + + L+ + E+A S ++S Sbjct: 183 IAISSSGQTKDIVNSTQLAKEKGAKVISITKYGDNPISNLSDVQLFVSSSEKAKRSGAMS 242 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + A + D+L+I + D +++ ++ +K Sbjct: 243 SRIAMLSIIDILYICIASNDYLSNRQKLENTRKAIKN 279 >UniRef50_B6ITC5 HTH-type transcriptional regulator hexR, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6ITC5_RHOCS Length = 280 Score = 212 bits (541), Expect = 8e-54, Method: Composition-based stats. Identities = 83/277 (29%), Positives = 136/277 (49%), Gaps = 5/277 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RIR GL +S++K+AD +L QP + S +LA++A VSQ +VV+F + +G G Sbjct: 1 MLDRIRSMRPGLRRSEQKIADIVLRQPHAVVNASVAELAHDADVSQPTVVRFCRSIGCSG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + KL L++ LA+ P + +R DDP+ + KL+ + A+ N + + L Sbjct: 61 YQDFKLRLAQDLAAGP----ARPEDAVRPDDPVAEIAAKLLNRSIGALTRLRNQLNPDAL 116 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V +L RR+ G GASG+VA + K ++G A D H P + Sbjct: 117 EAAVQVLTETRRLDCYGFGASGVVALDAQNKFFRLGLPVVAHTDSHVQAMAAALLGPQGV 176 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 LA+S +G REL + D L G +V+AIT + L RA+ L A E ++ + Sbjct: 177 ALAVSRSGRTRELLRSVDLALAGGARVIAITA-GGSPLAGRATVPLLVDAPEDSSPYTPM 235 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ A + D+L +A + + +R A ++ Sbjct: 236 TSRIAHLAVVDILQVATALRRGVHTGDPLRRPAAALR 272 >UniRef50_C6XNZ1 Transcriptional regulator, RpiR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XNZ1_HIRBI Length = 297 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 81/278 (29%), Positives = 139/278 (50%), Gaps = 4/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + RIR R L S +ADY+L + +S +LA G S+ SV+ ++LG Sbjct: 20 NVISRIRIRKDSLGPSTSTIADYVLGHANAVVGMSVTELAEATGTSEGSVINLCRQLGLS 79 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LKL+L++ + + IH ++ D V +K+ + A+ TL++ + Sbjct: 80 GFQQLKLSLAQEVVRPVQ----FIHEDLQPSDDTSTVCQKMFHAGSEALRETLSILDPDA 135 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V ++RSA R+ + GIG+S +A++ +++++IG +A V D H + + P+ Sbjct: 136 ISMAVDVIRSADRVEIYGIGSSAPIAEDAQYRMLRIGLDAKVVVDSHIQAISASRTGPNV 195 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L IS++G E A G K + IT F + LQ A LYT+A E S + Sbjct: 196 AVLTISHSGSTHETLAATRLARDAGAKTIIITNFASSPLQAYADVKLYTMARETKFRSEA 255 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +++ AQ + D+L AL D E A +R + ++ Sbjct: 256 MTSRIAQLCILDVLIAALALDDYERATTVLRQTSEVLS 293 >UniRef50_A8LV24 Transcriptional regulator, RpiR family n=7 Tax=Actinomycetales RepID=A8LV24_SALAI Length = 320 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 74/278 (26%), Positives = 137/278 (49%), Gaps = 1/278 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L R+R L + +++A+++L P+ A + +LA +G S +++ +F + +G++G Sbjct: 33 VLARVRAGADDLTGALRRVAEHVLSDPEAAARATIVELAERSGTSPATITRFCRAMGFEG 92 Query: 63 FPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + L+L ++ + +V I +I+ DPLR V +++I +T AM+ T + + Sbjct: 93 YADLRLGIAAETGRARLAGWTVDIGREIQPGDPLRRVLDQIIAADTRAMHDTAALLDLAE 152 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + A R+ + G S LV + + L +IG A A D+H LA+ D Sbjct: 153 VERAAVAIAGASRVNIFGASGSALVGEEMQFMLHRIGVAAWAWSDVHEGLASAALLRVGD 212 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + L +S++G RE E G +A+TGF + L + A L T + + Sbjct: 213 VALGVSHSGQTRETIEMLAEAGSRGATTVAVTGFPRSPLAELADIALLTASRATTFRPDA 272 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +SA H Q ++ DLL+IA+ Q+ + A +R + V Sbjct: 273 LSARHPQLVVLDLLYIAVAQRTHDRAHAALRRTAQAVD 310 >UniRef50_C6J4B4 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J4B4_9BACL Length = 288 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 64/277 (23%), Positives = 128/277 (46%), Gaps = 1/277 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L++IR + L ++ +A+Y+L + HLS + LA + S +SV++F + +GY Sbjct: 7 NILIKIRDMKENLTPVERMVAEYILANTEDIPHLSIKSLAKLSKTSDASVLRFCKTMGYS 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + +++S A + + I+ D L + + + N ++ TL+V + Sbjct: 67 GYRSFIVSISAA-LGSMDDERKDQYTDIQPGDDLDTIIANISRNNMKSIEDTLSVLDRGE 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V LR++ RI+ GIGASGLV Q+ K +I + D H+ L D Sbjct: 126 VARAVKALRASNRIVFFGIGASGLVCQDGEQKFSRINKMCHSYTDGHSQLTAATLLGKGD 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + +S +G E+ + + +AIT + + L +A L E S + Sbjct: 186 VAIFVSNSGNTLEIIETLEIAKKNNATTVAITKYNKSELADKADILLGISTPEITMRSGA 245 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + + A + D+LF + + + + + + +++ Sbjct: 246 MGSRIAMLTIIDMLFAGVASAEYQNVKKYLTKTHSIL 282 >UniRef50_C0ZJF9 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZJF9_BREBN Length = 297 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 69/277 (24%), Positives = 131/277 (47%), Gaps = 4/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LL I+ +S++K+A +L Q D+ + S LA +AGV +++V++F +K+G+ Sbjct: 20 NTLLHIQSLLPSFTKSEQKVAHIVLQQTDSVIYSSVIDLAEKAGVGETTVLRFCRKIGFH 79 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ KLAL++ +P +H ++ DD L ++ K+ N A+ T + E+ Sbjct: 80 GYQEFKLALAQE----LVNPVKNLHGEVGEDDSLDIITHKVTATNQQAIGDTSALFQLEQ 135 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L CV +L+ A I G+G S + AQ+ + ++IG A + H P D Sbjct: 136 LERCVDLLQKANTIHFYGVGTSAVTAQDAKYTFLRIGLRVDAFNESHLQAMAAATLGPGD 195 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + +S +G ++ + + G + +T + + + A L T A+E S Sbjct: 196 VAIGLSVSGSTKDTIDSLKVAKQAGAACICLTHYRRSPITNVADITLLTAAQEGPLQGGS 255 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++A AQ + D++ + ++ E A + V Sbjct: 256 LAAKIAQLHVLDVISTTITMRNKEKALLYKERTAKAV 292 >UniRef50_C4G9W4 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G9W4_9FIRM Length = 280 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 66/277 (23%), Positives = 124/277 (44%), Gaps = 6/277 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LL ++ Y L +++KK+ADY+ +S +LA E V+ +SV +F + +G K Sbjct: 5 NVLLSMQLSYNQLTRTEKKIADYVQKNAQKVLFMSITELAEECHVADASVHRFCRTIGAK 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ K+ LS + + + + ++++K + A+ T + +EK Sbjct: 65 GYQEFKMWLSINMGHEKGEEESEEEDGKEP------IFQQVLKSHLEAINETNQLLDKEK 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V ML AR+I+ G+G S A K + + D H + +D Sbjct: 119 VDQAVRMLTEARQIMFFGVGDSKTAAIEANNKFLHVTPKVMCAGDTHLQAMAASMMTEED 178 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 LL +SY+G ++ A G KV++IT F + L + + L ++E S Sbjct: 179 LLFVVSYSGSTKDTVEVAQIAKEAGAKVISITRFLKSPLTEFSDCVLICGSKEGPLEGGS 238 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + A +Q + D+L+ + + + A E + + V Sbjct: 239 MGAKLSQLHIIDILYQCYFKANGKKARENRQKTANAV 275 >UniRef50_C6D7K6 Transcriptional regulator, RpiR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D7K6_PAESJ Length = 284 Score = 210 bits (535), Expect = 4e-53, Method: Composition-based stats. Identities = 67/277 (24%), Positives = 122/277 (44%), Gaps = 2/277 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + I Y ++KK ADY+L D ++S LA GV ++S+ +F + LG+K Sbjct: 5 SITSTIHSHYNRFTATEKKTADYILEHADAVVYMSITDLAEGCGVGEASIFRFCKALGFK 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ K+AL+ + ++ + Q++ D L K ++ N A+ T + + Sbjct: 65 GYQQFKIALA--HSISADNEIPQLSGQVKIQDTLEDAVSKTLQSNINALNETFKLIQLDS 122 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 ++ + +L + R I G+G+S + A K M+I D H + D Sbjct: 123 INRAIDLLIRSDRFIFYGVGSSLMTAMEANNKFMRITNKTGCSVDSHQQAMSAALMGERD 182 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + ISY+G ++ A + G ++ IT F + L + L A E S Sbjct: 183 VAIIISYSGSTKDSIEVAKKAKERGAAIIVITRFVKSPLTSYSDITLLCGANEGPLQGGS 242 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +SA AQ L D+L++ ++ E + ++ A V Sbjct: 243 LSAKIAQLYLLDVLYVEYFKRTYEASIVNKENTSAAV 279 >UniRef50_B2TJ91 Transcriptional regulator, RpiR family n=1 Tax=Clostridium botulinum B str. Eklund 17B RepID=B2TJ91_CLOBB Length = 285 Score = 209 bits (533), Expect = 7e-53, Method: Composition-based stats. Identities = 66/275 (24%), Positives = 131/275 (47%), Gaps = 4/275 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L RI Y L ++KK+A Y+L P H S +LA + S+++V + KLGYKG+ Sbjct: 10 LERITNIYSELKGAEKKVAQYVLENPKNIIHFSITELAEVSKASEATVFRLCSKLGYKGY 69 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 LK+ L+ P I+ +++ +D ++ K++ N ++ +TL +N E L Sbjct: 70 QDLKINLA----GSVIEPIDNIYEEVKENDDTYIIMRKIMSSNINSIESTLKINKTEDLD 125 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 + + ++ +A++I+ G+G S +A + K ++ G + A D H + ++ D + Sbjct: 126 KAIAIILNAKKIMFFGMGGSWTIANDAYHKFIRTGIDCVASCDSHWQVMFSSMANSGDAI 185 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 +A S +G +EL + + G K++AITG + L + + L E S ++ Sbjct: 186 IAFSNSGSNKELVENINLAKKRGIKIIAITGNEKSPLAKISDLHLIAYGNESMFRSEAME 245 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + M+ D L++ + + + + + Sbjct: 246 SRLTSLMIVDWLYVGVAIKRKDKTLGNLERIRNGI 280 >UniRef50_C2L140 RpiR family transcriptional regulator n=6 Tax=Clostridiales RepID=C2L140_9FIRM Length = 285 Score = 209 bits (532), Expect = 9e-53, Method: Composition-based stats. Identities = 65/279 (23%), Positives = 119/279 (42%), Gaps = 1/279 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +IR Y +++KK+ADY+L PD +S LA V +SV +F + + K Sbjct: 4 DFLTKIRSAYNQFTKAEKKVADYILQNPDQVLFMSISDLAETCKVGDTSVFRFCKTMNVK 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDP-LRLVGEKLIKENTAAMYATLNVNSEE 120 G+ K+ LS ++ + + D + + K+++E ++ T ++ Sbjct: 64 GYQEFKMTLSLSMRGNGKESKEGDGGNVSLQDNNIAELAGKVLEETIDSIKETHSLLDFN 123 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 K+ E + L A+RI+ G+GAS L A K +I + L + Sbjct: 124 KVTEAMNALSKAKRILFFGVGASMLTAMKAMNKFHRIEPKVYCSEMVSQQLMSAATMERG 183 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ + SY+G R++ A G V++IT F + L L A + Sbjct: 184 DVAVIFSYSGATRDIVEIAKLAKESGATVVSITRFQKSELTDYTDILLLCGANVGSLQKG 243 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S SA +Q L D+++ ++ E + + + +K Sbjct: 244 STSAEISQLFLVDIMYTEYYRRHYEYCNQILEKTTVAIK 282 >UniRef50_A5L3V2 Transcriptional regulator, RpiR family protein n=3 Tax=Vibrionales RepID=A5L3V2_9GAMM Length = 282 Score = 209 bits (532), Expect = 9e-53, Method: Composition-based stats. Identities = 107/281 (38%), Positives = 161/281 (57%), Gaps = 1/281 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M G+ +++ L+ SD +A Y+L P + LSS +LA GVSQS++VKF+QK+GY Sbjct: 1 MKGIAKVKALLPKLSPSDSLVARYVLDHPQQVKQLSSPELAKAVGVSQSTIVKFSQKIGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGF +K+ L ++ S IH I D V EKL+ T ++ T+ +N E Sbjct: 61 KGFSEMKVKLYQSDMSYQPVSQRGIHGTITRKDSPDTVMEKLLASKTQSLERTVLLNEGE 120 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L +L A +I ++G+GAS LVA++FA+KLMKIG A D H +A + + + Sbjct: 121 QLSNAADLLHLANKIQISGVGASSLVAKDFAYKLMKIGHAVHAEPDAHIQIANAASLTEN 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L+AISY+G RE+ A KV+ I+ +P+AL + A L + A+E S+ Sbjct: 181 DVLVAISYSGKTREVVKVAQLARSKKAKVIVISQLSPSALDKYADIKLISAADENHIRSS 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 SI+A +Q +TDLLFIAL QQ E A + I S++ V + Sbjct: 241 SITARDSQFYITDLLFIALTQQ-EEQADQLIEQSKSAVAEF 280 >UniRef50_A9KMQ5 Transcriptional regulator, RpiR family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KMQ5_CLOPH Length = 285 Score = 208 bits (530), Expect = 1e-52, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 127/277 (45%), Gaps = 1/277 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N ++ R L S++K+A Y L + + +LA E+GVSQ + ++F + +G+ Sbjct: 3 NIEIKTRSIMDSLNNSERKVATYFLNNIENIFSIPIARLAEESGVSQVTWIRFCKAIGFD 62 Query: 62 GFPALKLALSEALASQPESPSVPIHN-QIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G LK +L L S I+ L + + A+ T+ + + Sbjct: 63 GLKDLKKSLFMELNSSTSEGIDTSDFSDIKKHSTLEQMCNTIRNTTLQAVEDTIKLIDYD 122 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V++L A I L G+GAS LVA +F KL++I N DMH L + P+ Sbjct: 123 TLKKVVSILSKASCIKLFGVGASALVADDFCKKLLRINKNVNFSYDMHTQLVYGANARPE 182 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ + SY+G +E+ D + + IT +T + L A + +Y A E S Sbjct: 183 DVAVIFSYSGTTKEMLEIMDLAKKSNCPTIVITKYTKSPLVASADYSIYISAPEINYRSG 242 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 ++S+ AQ + DLLF +L ++ + + S + Sbjct: 243 AMSSRIAQLTIVDLLFTSLANKNYTSVEKYLEKSSEV 279 >UniRef50_C0Z7S3 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z7S3_BREBN Length = 288 Score = 207 bits (528), Expect = 2e-52, Method: Composition-based stats. Identities = 74/274 (27%), Positives = 146/274 (53%), Gaps = 3/274 (1%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 ++ L S++K+ADY+L P+ LS Q+LA +GVS++++++ A+ L KG+ L Sbjct: 12 LQAILDQLKPSERKVADYILAHPEDVVKLSVQKLAEYSGVSEATIIRLARSLNMKGYQEL 71 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 KL ++ L Q + + +I + + + + + N ++ TL+V S E++ + V Sbjct: 72 KLRVAGDLTKQT---ARGSYQEIMMEGSVESIMQAVSWNNIQSIQDTLSVLSNEEVKKAV 128 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 +L AR+I + G+GAS ++A + K +I A D HA L + + D+++ I Sbjct: 129 DVLSVARKIDVYGVGASAVIADDIRQKFSRINLWCEAYSDFHAQLTSAVTLTEKDVVIGI 188 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 SY+G ++ + E + G ++ +T F P+ + + A+ L+T + E++ S ++++ Sbjct: 189 SYSGQTEDIIQSLTEAKQQGATIITLTKFGPSPVAELANIRLFTSSVEKSIRSGAMASRI 248 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 AQ + D+LFI +I + E + S V + Sbjct: 249 AQLNVIDILFITMISRMQERVIPLLEKSRLAVSR 282 >UniRef50_Q1QSE2 Transcriptional regulator, RpiR family n=28 Tax=cellular organisms RepID=Q1QSE2_CHRSD Length = 289 Score = 207 bits (528), Expect = 2e-52, Method: Composition-based stats. Identities = 66/280 (23%), Positives = 122/280 (43%), Gaps = 7/280 (2%) Query: 1 MN--GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 M+ +R+R + +S++K+A ++L P+ H+ LA EA VS+ +VV+F + L Sbjct: 1 MSSALFDEMRRRMEHFRRSEQKVARFVLRHPEDVIHMRIVDLATEAKVSEPTVVRFCRAL 60 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 G GF KL L++ LA+ + + D + + + + + Sbjct: 61 GCNGFQDFKLKLAQMLATGSQ----FAQFSMNDSDSVAEFAHNIFDSTVGTLLSVRDRLD 116 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 L + VT L A R+ G GASG VA + K ++ + AA D H + + Sbjct: 117 HAALGKAVTALAMANRVEFYGFGASGAVAFDAQHKFFRLQISTAAYTDPHMQNMSAVTLT 176 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P D+++AIS TG R L + G V+ + + + L + LY E Sbjct: 177 PRDVVVAISQTGRTRALVASVRLARETGATVIGL-CPSDSPLASEVTLPLYIDVHEDTEI 235 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +S+ A ++ D+L + + + E+++ + + Sbjct: 236 YTPMSSRVAHLVIIDVLAVGVAKTRGPKLAEQLKSVKKSL 275 >UniRef50_UPI000197C448 transcriptional regulator n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C448 Length = 286 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 105/284 (36%), Positives = 162/284 (57%), Gaps = 3/284 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L I LA++ +K+A ++L P+ +LSSQQLA VSQS++VKF+QK+G Sbjct: 1 MTLLDIITYSLPRLAENQRKIAQFILENPENVLNLSSQQLAEILDVSQSAIVKFSQKVGV 60 Query: 61 KGFPALKLALSEALASQPES---PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 KG+PALKLALSE + Q P +HN+I DD L +V +KL E ++ T + Sbjct: 61 KGYPALKLALSEIIGRQQLKDGAPHSALHNRIAPDDNLMVVAQKLAMEKNHSITETTKLI 120 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 ++ V + ++R+ + GIG SGL A++ ++KL KIG D H +A Sbjct: 121 DFKQFERIVERIDQSQRVQIVGIGGSGLTAKDLSYKLQKIGITTLVESDHHVQIAAALTL 180 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 + D+ + IS+TG R+++ AA+ + G V+AIT + L Q A + L +IAEE Sbjct: 181 NTHDVQIVISFTGRRKDMLTAANIARKQGACVIAITRDCDSPLGQLADYVLESIAEEDEW 240 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+SIS+ AQ LTDL+F+AL+Q+ A + ++ ++ KL Sbjct: 241 RSSSISSRTAQNTLTDLIFMALLQRREAKAKSLVMNARVVINKL 284 >UniRef50_C4FUK3 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FUK3_9FIRM Length = 280 Score = 207 bits (526), Expect = 4e-52, Method: Composition-based stats. Identities = 72/281 (25%), Positives = 133/281 (47%), Gaps = 4/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + +I+ + + +++ + Y+L +++ +L +G S ++ +FA+K+GY Sbjct: 1 MSCITKIKSALESMTATEQMIGRYILEHRHEVLEMNTLELGWASGTSGAAWTRFAKKMGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG PALKL L++ + + + D L + K + T + E Sbjct: 61 KGLPALKLDLAQDRTDEEMP---EVDLFLDPRDTLGALLHKTQTILEQNLRRTYELIDEA 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + + M+ SA R+ L GIG SG+V + KL +I RD H L+A + P Sbjct: 118 VLAQAIDMMASAHRLFLCGIGGSGIVCMDLVHKLTRINRPVTYDRDTHVLMAQMAHCMPG 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITG-FTPNALQQRASHCLYTIAEEQATNS 239 D++L +SY+G +N A G K++AITG L A CL+ +E+ Sbjct: 178 DVVLVVSYSGNTHTVNQMAYLAKEQGAKIIAITGHNLKAPLASLADVCLFIPRDEKEIRL 237 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 S+++ ++TDLL+ + Q+ E + + +++K Sbjct: 238 GSVTSRDGSLIVTDLLYYGVAQRQFHATKEHLVKTRKMIRK 278 >UniRef50_C6J1X3 RpiR family transcriptional regulator n=2 Tax=Bacillales RepID=C6J1X3_9BACL Length = 289 Score = 206 bits (525), Expect = 7e-52, Method: Composition-based stats. Identities = 76/277 (27%), Positives = 135/277 (48%), Gaps = 3/277 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L + + L+ ++KL +Y+L P T H +LAN G+S S+V +F + +KG Sbjct: 4 ILHAVSSHLETLSPQERKLGEYILESPATVIHQGITELANACGISPSTVTRFCKTFHFKG 63 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 FP K+ L+ LA +P + + I + L+ + E + + A++ T + +L Sbjct: 64 FPDFKMKLASELAHKP---AENHYQDIIAGNDLQKIVEAMEANHLASITDTTRLLDMNQL 120 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V L A+RI L G+ S +VAQ+F KL++IG N A D H + + + D+ Sbjct: 121 SRAVEALCRAKRIDLYGVATSSIVAQDFYQKLVRIGKNCTAFADSHMQITSASSLGEGDV 180 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 LAISY+G E A G L++T ++ N+L A L++ + E+ + Sbjct: 181 ALAISYSGETPETIDALRCAKDSGATTLSLTQYSSNSLASLADIALFSSSLEEGMRRGDM 240 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ AQ + D+LF ++ + + ++ S V+ Sbjct: 241 ASRIAQLHVIDILFTGMVSLEFQDFIPKLESSYQNVQ 277 >UniRef50_C6L9A2 Transcriptional regulator, RpiR family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L9A2_9FIRM Length = 336 Score = 206 bits (524), Expect = 7e-52, Method: Composition-based stats. Identities = 65/261 (24%), Positives = 120/261 (45%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L I ++Y L +S KKLADY+ ++LS LA +GVS++++ +F +KLG Sbjct: 55 NILDLITEQYPTLTRSGKKLADYIFANTTETQYLSISALAENSGVSEATITRFCRKLGLS 114 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ KLA++++ + I D L + +KL+ N ++ T ++ E++ Sbjct: 115 GYNDFKLAIAKSDHVTDMGEPSGSPSTITSQDSLPDIFQKLLSANILSLTETFDLLDEKE 174 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V +L A + G G+S ++A + + D H + ++ ++P D Sbjct: 175 ISRAVDLLYGAHHVYCLGNGSSSVMAMEAWARFSTASTRFIHIADSHMQMLSIALATPQD 234 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++L SY+G R++ + + V+ +T F + A L E S S Sbjct: 235 VILFFSYSGATRDMEDIMNIAHKRKIPVILVTHFPKSQAAAFADVTLLCGYNESPLQSGS 294 Query: 242 ISACHAQGMLTDLLFIALIQQ 262 I+A Q ++ D LF + Sbjct: 295 IAARMGQMLIIDCLFHGFCLK 315 >UniRef50_P46118 HTH-type transcriptional regulator hexR n=302 Tax=Gammaproteobacteria RepID=HEXR_ECOLI Length = 289 Score = 206 bits (524), Expect = 7e-52, Method: Composition-based stats. Identities = 63/280 (22%), Positives = 127/280 (45%), Gaps = 5/280 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L +I+ + + L++S++K+A+ +L PD A H S +A EA VS+ +V +F + + Sbjct: 1 MNMLEKIQSQLEHLSKSERKVAEVILASPDNAIHSSIAAMALEANVSEPTVNRFCRSMDT 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GFP KL L+++LA+ + ++ + DD + K+ + A + + + Sbjct: 61 RGFPDFKLHLAQSLANG----TPYVNRNVNEDDSVESYTGKIFESAMATLDHVRHSLDKS 116 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ V +L A++I G+G+S VA + K + D+ + S Sbjct: 117 AINRAVDLLTQAKKIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNCSDG 176 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ IS+TG + L A V+A+T L + A+ + E Sbjct: 177 DVVVLISHTGRTKNLVELAQLARENDAMVIALT-SAGTPLAREATLAITLDVPEDTDIYM 235 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + AQ + D+L + + ++ + +K+ Sbjct: 236 PMVSRLAQLTVIDVLATGFTLRRGAKFRDNLKRVKEALKE 275 >UniRef50_C4KZ09 Transcriptional regulator, RpiR family n=85 Tax=Bacillales RepID=C4KZ09_EXISA Length = 301 Score = 206 bits (524), Expect = 8e-52, Method: Composition-based stats. Identities = 74/280 (26%), Positives = 134/280 (47%), Gaps = 2/280 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +I + + +KK+ADY+L ++++++LA + VS++S+V+FA+ +G Sbjct: 22 SLLTKIDLAKEDMTAVEKKIADYILSHSTLIPNMTTKELAQKTDVSEASIVRFARVVGID 81 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F A KLAL + LA + + N ++ D +K+I N AA+ A + + Sbjct: 82 SFKAFKLALVKDLAVTETTLTDF--NVLQQKDTPYDSFQKVIHVNKAAIEACAEAMDKRE 139 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V + A R+I G+G S A + +K K+G+ A D H +L+ + D Sbjct: 140 LEHAVDLFARASRVIFYGVGGSSTAAIDAQYKFTKLGYAATTSPDFHYMLSLIPHLGKSD 199 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + +AIS +G +++ + V+AIT + L + A L T E AS Sbjct: 200 VFVAISTSGRTKDVLELVRFAKKKRVPVIAITNLDKSPLYREADVRLCTPNVESDFRIAS 259 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 I++ Q + D L++ L+ + E +R + + KL Sbjct: 260 IASRMTQLTIIDTLYMGLLHRKGEGLIDRYAEARDEMVKL 299 >UniRef50_A6LRF3 Transcriptional regulator, RpiR family n=2 Tax=Bacteria RepID=A6LRF3_CLOB8 Length = 294 Score = 205 bits (523), Expect = 9e-52, Method: Composition-based stats. Identities = 68/283 (24%), Positives = 135/283 (47%), Gaps = 4/283 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + +I+ Y L S+KK+ADY+LL + ++ +L+ + GVS+ ++++F + +G Sbjct: 6 SYEYKIKNMYNLLRSSEKKVADYVLLNGHSVSTMTLAELSRQVGVSEPTIIRFVKSIGCS 65 Query: 62 GFPALKLALSEALASQPESPSVP----IHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 G+ K+AL + + + I D+ + V K+I A+ TL + Sbjct: 66 GYSEFKMALMKEWGRESVDKQYDSKLLVELHIDRDEKIEDVPVKMIGLTIKALEDTLKII 125 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 K + + M+RS+ I + G+G SG VA + K ++IG A D + Sbjct: 126 DINKYKKAIEMIRSSNIIDVYGVGNSGSVASDIRNKFLRIGLECRAYSDSNIQQICASHL 185 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 + +DL + +S++G + A G + +A+T F A+ + A +T EE Sbjct: 186 TSNDLAIGVSHSGSTIDTVNALKIAKESGARTIALTNFKAPAISEYADITFFTGGEETTF 245 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 S ++ + +Q + D+L++ ++ D +L +R+ L+K+ Sbjct: 246 YSETMVSRISQLAIVDMLYMGILLDDYDLYTKRLEKINLLLKE 288 >UniRef50_D1YCB1 Transcriptional regulator, RpiR family n=3 Tax=Propionibacterium acnes RepID=D1YCB1_PROAC Length = 290 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 73/280 (26%), Positives = 125/280 (44%), Gaps = 2/280 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L RI + ++ ++A +L +PD S+ QLA AGVS ++VV+F + LG Sbjct: 4 SLLPRIDMARTTMRPAEAQVAAVILAKPDWTLAASTSQLAEAAGVSPATVVRFCRALGMS 63 Query: 62 GFPALKLALSEALASQ--PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ L+ L+ L+ + S I DD L + K+ + T Sbjct: 64 GYRELRTELARDLSRRTLELERSSVAEGTITLDDSLTQMITKIAFHEARTIENTARAVDA 123 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++L + + A R L G+G+SGLVA + + KL +IG +D H L Sbjct: 124 DELEAVASAISIAPRTALFGVGSSGLVASDLSEKLERIGLVCQHHQDTHMQLVHAALCKR 183 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 + L IS++G +E+ A + G +A+TG + + + A H L T A E + Sbjct: 184 PCVALGISFSGNTQEVVEALTVAQKHGATTVAMTGLPDSPVGRLADHVLVTSARETQVRA 243 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++S+ AQ + D LF + Q ++ + + V Sbjct: 244 GAMSSRMAQLAVVDFLFARVAQLCMDDLETLLSSTRTAVS 283 >UniRef50_C1PDB4 Transcriptional regulator, RpiR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PDB4_BACCO Length = 283 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 69/275 (25%), Positives = 138/275 (50%), Gaps = 4/275 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L RI+ Y + ++K+ADY+L P H + Q+A++ V+ ++V +F +++G+ GF Sbjct: 11 LHRIQTMYSEFSAKERKIADYILENPQRLVHSTINQVADQLLVADATVFRFCKRIGFSGF 70 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 ALK+AL+ P + ++ D + V K+ + N + T++ +++ LH Sbjct: 71 QALKIALAAE----AARPGKNMDEAVKDTDNEKAVAIKVFESNIETLQDTIHTLNQKHLH 126 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 E V + A+ I+ G G++ ++A + K ++ A D H L + + +D+ Sbjct: 127 EAVEWICRAKHIVFYGCGSASVIALDALEKFLQTDLAVTAYTDPHLQLLSAARCTKEDVA 186 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + IS+ G +E+ + + G K +AIT F + L Q+A L+T+++E +S S Sbjct: 187 VFISHAGADKEMLKLLQAVQKTGAKTIAITQFAKSPLSQKADVPLFTVSQEADFRFSSFS 246 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 A Q L D L++ ++ + + E ++ + Sbjct: 247 ARIVQLSLIDTLYVNVMLRYKDTNEEILQKGKETY 281 >UniRef50_A7VQA6 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQA6_9CLOT Length = 290 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 64/278 (23%), Positives = 131/278 (47%), Gaps = 4/278 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M RI+ Y L+ + KK+AD+++ PD A H++ QLA VS++SVV+F Q L Y Sbjct: 12 MGCTERIQATYSALSGASKKIADFVIDHPDQAVHMTVVQLAESCEVSEASVVRFCQCLQY 71 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF KL+L+ + + I I +D + EK+ A+ TL + + + Sbjct: 72 AGFYEFKLSLAAEIVPASQ----MIQEDITVEDTEPTILEKVFAGEQQALQETLQMLNRQ 127 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 V + + ++ G + +AQ+ ++L++ G ++ D + L Sbjct: 128 DFISAVNHIAFSNKVEFFSCGNARPIAQDAHYRLLRTGIDSRIGIDDYDCLIHASMLRTG 187 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ + IS++G + +E + G + ITG + + + C+ + ++E S Sbjct: 188 DVAIGISHSGSTKNTIKMLEEAKKNGATTICITGMEKAPITRVSDICMVSHSKETMFRSM 247 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++++ AQ + D L +A+ + E + + + ++ ++ Sbjct: 248 AMASRIAQMAIIDALVVAVSFKRFERSKQYLTLTDKIL 285 >UniRef50_D1ALE3 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1ALE3_SEBTE Length = 282 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 65/277 (23%), Positives = 136/277 (49%), Gaps = 2/277 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N +I + S+ K+ +Y+ P++ ++ ++L+N ++++++F +K G+K Sbjct: 7 NLFNKINSLKKSFTASETKVFNYIEKNPESVVRMNIRELSNAIDTGETTIIRFCKKTGFK 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ K++L +L+ + +S I I D+ + E + + + TL++ + E Sbjct: 67 GYNDFKISLISSLSKEKQSNKYKID--ILADENYNSIAEGIYNNSFNVLKDTLSLINNEI 124 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L +C+ ++ +A+ I GIG S L AQ+ +K ++IG + A+ D H S +D Sbjct: 125 LDKCINLINNAKHIEFIGIGHSNLTAQDAKYKFLRIGKSVASHSDPHLFKMAASISDRED 184 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++ IS TG RE+ + G K +AIT + + A + L E+ + S Sbjct: 185 VIIGISQTGETREVIDSLQSAKVRGAKTIAITNNDKTEITKYADYVLLNGFNEELLETGS 244 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 S +Q + +LL++ ++ ++ + A E + V Sbjct: 245 FSERISQLFIIELLYLGVLSKNKDKAMELKDLTIKAV 281 >UniRef50_A9BXM8 Transcriptional regulator, RpiR family n=16 Tax=cellular organisms RepID=A9BXM8_DELAS Length = 323 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 60/277 (21%), Positives = 111/277 (40%), Gaps = 1/277 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RI LA +++++A +L P ++LA A VS+ +VV+F + +GY G Sbjct: 43 MLDRITASLPSLAPAEQRVARLVLADPRAFARQPVRELAERAHVSKPTVVRFCRSMGYDG 102 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 KL L+ +++ + + D + V + + A E+ Sbjct: 103 LADFKLKLAGSVSEGVPFIHRSVDTDDKTSDVMVKVVDNAVAAFLQYRNAASTTAIEQAA 162 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + ++ RRI G G SG+VAQ+ K ++G + A D H + + P D Sbjct: 163 QAIASTWQTGRRIEFYGAGNSGIVAQDAQHKFFRLGVTSLATSDGHMQVMSATLLGPGDC 222 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + IS +G R+L AAD + G +AIT + L L E + + Sbjct: 223 AVIISNSGRTRDLMDAADIARKNGATTIAITAS-GSPLASACHIHLAADHPEGYDRYSPM 281 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + ++ D+L + + + + ++ Sbjct: 282 VSRLLHLLVIDVLATCVALRIGPALQPALEQMKNNLR 318 >UniRef50_UPI0001789683 transcriptional regulator, RpiR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789683 Length = 289 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 77/280 (27%), Positives = 142/280 (50%), Gaps = 3/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LL I Y L +++KK+ADY+ P+ + L+ +AGV ++SV++F +KLG++ Sbjct: 12 NTLLMISSIYSSLTKTEKKVADYVKGFPEETVLATVTDLSEKAGVGETSVIRFCRKLGFR 71 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF KL++++ L +P S + I D L V KL ++ + TL++ + + Sbjct: 72 GFHEFKLSVAQDLVDRPPS---VVDTSIDEQDDLMTVARKLTMQHEILLKNTLDLVNADN 128 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V L +A ++ + G+G+SG+ A + ++LM++G N A RD H + + D Sbjct: 129 LRMAVDKLLAANKVYVYGVGSSGITALDLHYQLMRLGLNVEAHRDSHIIAMSASLVKKGD 188 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L+ AIS +G R+L A E + G V+ +TG + + A L + E T + Sbjct: 189 LVFAISTSGSTRDLVDAVKEAKKNGADVICLTGHLRSPIATYADTVLLVSSREMPTEGGA 248 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++ Q + ++L L + + + + + ++ KL Sbjct: 249 LATKFMQTYMLNILTTLLTMKKEDASESLKKTASSVADKL 288 >UniRef50_A8RI47 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RI47_9CLOT Length = 285 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 71/275 (25%), Positives = 148/275 (53%), Gaps = 5/275 (1%) Query: 6 RIRQRYQGLAQ-SDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 R++ + + ++ K+ +++ + H+S A GVS++++V++AQKLGYKG+ Sbjct: 11 RVQSILPSINKKNEMKIYEFIEINRKEIIHMSVADAAEACGVSEAAIVRYAQKLGYKGYQ 70 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 A+K+++++ + + I+ Q+ D + + +K+ N ++ T +V S E + E Sbjct: 71 AMKISIAQDVIEPGQQ----IYGQLSKGDTIPTIVDKIFDSNIQSLRDTSDVLSRENIDE 126 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 V ++ RR++ G+G SG VA + K +KIG+ A A D + + D+L+ Sbjct: 127 AVNLILGCRRLLFFGVGGSGCVAMDGQHKFLKIGYMAMAFTDSNLQAMAASVLTSRDVLV 186 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 A+S++G +++ +A D + G K +AIT + + + ++A LYT + E A NS ++S+ Sbjct: 187 AVSHSGASKDILMAMDIAKQSGAKTIAITNYGKSPIVEKADVVLYTSSNETAFNSDALSS 246 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 A+ + D+L+I + + + + I + + Sbjct: 247 RIAELTIIDMLYIGVSYKRYDESYANILKTRKALD 281 >UniRef50_A8FIY5 Possible RpiR family transcriptional regulator n=4 Tax=Firmicutes RepID=A8FIY5_BACP2 Length = 286 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 64/279 (22%), Positives = 139/279 (49%), Gaps = 3/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N IR + L+ + KK+A+Y+L P S LA+E S++++ +F +K+GY+ Sbjct: 8 NIFSHIRTTFHSLSPTQKKIANYILENPQKVVLHSISALASECNTSETTIFRFLRKIGYE 67 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + ++ +++ +A+ I+ +I D + + K+I+ T ++ ++ + Sbjct: 68 SYQVFRVHVAQDIATNTPQ---SIYGEIEASDSVADIKHKVIELTTNSIQDMKHIVEDHA 124 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + + ++ A + + G GAS +A + K +++GF+ + D H + ++ D Sbjct: 125 VTQFIEQMKQAHKTVFFGAGASSFIAGDAYHKFLQLGFDVSLCSDPHMMNMIATHATEHD 184 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++AIS++G RE+ A G K+ +IT + + L +R+ L + + E S S Sbjct: 185 FIVAISHSGESREILDAVQFAKEKGAKIASITSYPKSELAKRSDFHLLSSSRETTYRSDS 244 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + Q ++ D+L++A + + A E ++ S V K Sbjct: 245 MISRINQLVIIDVLYVAAVLELGSNAIENVKRSRLAVAK 283 >UniRef50_C8NZR0 RpiR family transcriptional regulator n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZR0_ERYRH Length = 280 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 72/279 (25%), Positives = 140/279 (50%), Gaps = 4/279 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + RI++ ++K++A+Y+L D + SSQ A E S +++V+F++K+GY Sbjct: 1 MSCIYRIKENMHTYTDTEKRIAEYILENKDEVVNFSSQHFAKEINSSAAAIVRFSKKIGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+ L+ + + +S I+ +D + + K N T + + E Sbjct: 61 NGFTHLKVELARDHSEEEQSF----DKLIKEEDTIETMVRKSHYSNHRTFDNTYKLLNLE 116 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + + +ARRI L GIG SG+V Q+ K ++I + D H ++++ + + Sbjct: 117 VLDASIAAISNARRIYLLGIGGSGIVCQDLYHKFVRIDADVVYFDDFHLEMSSLTHITEN 176 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ +A+SY+G RE+ +A G +AIT N L + + + EE Sbjct: 177 DVTIALSYSGQTREIIMAQKLAQDKGATTIAITQVGRNELAKNSDFVINIPKEESEVRLG 236 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 SI++ + ++DLL++ + + ++E +I ++ +K Sbjct: 237 SIASRFSMLAISDLLYLGVAKNNIEETRRKIVNTRDTIK 275 >UniRef50_B8KWX3 Bifunctional protein glk n=3 Tax=unclassified Gammaproteobacteria RepID=B8KWX3_9GAMM Length = 337 Score = 204 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 69/278 (24%), Positives = 112/278 (40%), Gaps = 5/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L I Q GL +S+ K+A +L PD A +S LA+ AGVS+ SV +F ++ G Sbjct: 52 NLLEDINQSLPGLNKSEVKVAQAILSDPDAATRMSIASLASRAGVSEPSVNRFCKRFGAS 111 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GFP KL L+ ++ S I + D + KL +A+ A Sbjct: 112 GFPDFKLRLATSMVSG----VRYISRAVEFSDDIDTYPGKLFDNAISALVAAKEQLPTGD 167 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V L ARRI G+G S V ++ K + +D A S D Sbjct: 168 IARAVDFLAQARRIHFFGLGTSAAVTKDAEHKFFRFNVPVTNHQDPLMQRMLAAAGSVGD 227 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + IS+TG R L A+ + V+++T + L Q + + E Sbjct: 228 VFFIISHTGRTRALVEVAELARQTEATVVSLTA-PQSPLAQESDCAITLTIGENTEEYLP 286 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +++ Q + D+L + + E + + +K Sbjct: 287 MTSRLVQLAVIDVLATGVTLRRGERFLPHLARIKDSLK 324 >UniRef50_C0D6A5 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D6A5_9CLOT Length = 282 Score = 203 bits (517), Expect = 4e-51, Method: Composition-based stats. Identities = 65/276 (23%), Positives = 133/276 (48%), Gaps = 2/276 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L+++R Y+ L+ ++ ++ +Y+L P + +LA E+ S ++VV+ +K+ Sbjct: 6 MSVLIKLRD-YRNLSAAENQVREYILKYPKKVLEYTVYELAKESFTSPATVVRLCKKIDI 64 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQ-IRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 KGF LK+ L+E + + I +D + EK+ + T + +E Sbjct: 65 KGFARLKVLLAEETKYFQDMKLNLLDTTTIEKNDSPHAIIEKITNIAVKTIEETRVLVNE 124 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++ + +L+ A + G+GAS VA + +K M+IG N + S Sbjct: 125 KQFMQVARLLQKAVIVDFYGVGASSPVAIDAQYKFMRIGKNVITYQLYDRQYVQAVNSDA 184 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 + + ISY+G +E+ A + + G V+A+T N+L + A + L+ A+E S Sbjct: 185 SHVGIIISYSGETKEMLKIAGILQKNGTPVVAVTSSGENSLNRIADYNLFVTAKETVFRS 244 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 ++++ AQ + D+L+ D + + ++I+ + Sbjct: 245 GAMASRTAQLYIIDILYALYCSLDYDESIKKIQQTR 280 >UniRef50_C2D8M2 Possible transcriptional regulator n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D8M2_9ACTN Length = 291 Score = 203 bits (517), Expect = 5e-51, Method: Composition-based stats. Identities = 72/274 (26%), Positives = 137/274 (50%), Gaps = 1/274 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N ++R+R+ L ++K +A Y+L P + LS + LA + VS ++VV+ + +G++ Sbjct: 3 NIIIRLRENIGFLNPAEKAVARYVLQCPHESNRLSVKALAARSFVSPAAVVRMCKSIGFE 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF K L+ LA++ I+ +D L + +K+ +N ++Y L + E Sbjct: 63 GFKEFKTELTRELATEKL-ILPLDTKDIKQNDTLESIIKKITLKNIHSLYDALRLIDPET 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V +L++ RI+L G+GAS + A++ K +++ D H L T + S+ D Sbjct: 122 IEKAVELLQACDRILLFGLGASLIAAKDANLKFLRVNKTCLINDDWHLQLITARNSTSQD 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + ISY+G E A+ + ++AIT + + + A LYT + E SA+ Sbjct: 182 VGIVISYSGQTAETLTCAEILKHNNTPIIAITRCIESPISKLADVLLYTTSNESLFRSAA 241 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 +S+ +Q + D+L+ A D E + + Sbjct: 242 MSSRISQLNIIDILYTAFAVSDYEKNFTYLSKTR 275 >UniRef50_A8RRF4 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A8RRF4_9CLOT Length = 289 Score = 203 bits (517), Expect = 5e-51, Method: Composition-based stats. Identities = 72/274 (26%), Positives = 141/274 (51%), Gaps = 1/274 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L+RI++ + ++K + +L P+ A S +QLA++ S +++V+ +K+G+ Sbjct: 3 SVLVRIQEYSAQASGAEKGVLRFLRENPEEAAGYSIKQLADKTFSSAATIVRLCRKMGFD 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ L+ +L A + ES + P+ +I+ DD L + K+ +N ++ T + + Sbjct: 63 GYKELQKSLLYESALRRES-TRPMEQEIKKDDSLEELVNKVTYKNIVSLDNTRKLVDLDI 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L++CV +L ++ + L GIG+S LVA++ KL+++ D HA L + D Sbjct: 122 LNQCVELLDRSQTVYLFGIGSSLLVARDMYLKLLRVNKACVICDDWHAQLLQARNIRSCD 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L L +SY+G+ E+ A E V+ I+ F + L + A + L A E S + Sbjct: 182 LALIVSYSGLTEEMITCAREARLREAPVITISRFEQSPLVRLADYNLAVAATELIFRSGA 241 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 +S+ +Q + D+L+ A + + + E+ R + Sbjct: 242 MSSRISQLNMIDILYTAYVHKRYDECMEQFRKTH 275 >UniRef50_A6LUR0 Transcriptional regulator, RpiR family n=2 Tax=Clostridium RepID=A6LUR0_CLOB8 Length = 281 Score = 203 bits (516), Expect = 6e-51, Method: Composition-based stats. Identities = 72/282 (25%), Positives = 137/282 (48%), Gaps = 2/282 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L I+Q Y +K +ADYL+ + +S++ +A S +VV+FA+K+G+ Sbjct: 1 MNVLQYIKQNYDSFTDREKLIADYLIETKERIISMSARDIAEATKTSAPTVVRFAKKIGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 LKL LS ++ + E+ ++ + + + + + M T+++ EE Sbjct: 61 NTLNELKLKLSINISKEEEAGAIQFQYLDNDLGT-KNIIYGIKQSVDSIMEQTVSLLDEE 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + + +L SA+ I + +G SGLV Q+F +KL ++ D H + + Sbjct: 120 CLDKAIELLISAKNIYIFSVGVSGLVGQDFYYKLSRMNKRCICNTDTHLQITSSVLLEEG 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAIT-GFTPNALQQRASHCLYTIAEEQATNS 239 D+ LAISY+G +E+ V+AIT N + + + A E++ Sbjct: 180 DVALAISYSGETKEVIKCVKNARNRKVPVIAITKASVNNTIADISDIVIRIPAVEKSIRE 239 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +IS+ +Q + D+L+I +I+ +++ E++ + VK+L Sbjct: 240 GAISSRISQLAIIDMLYIGMIRNNIKEVEEKLISTRKAVKEL 281 >UniRef50_B0N1V0 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0N1V0_9FIRM Length = 277 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 74/280 (26%), Positives = 138/280 (49%), Gaps = 4/280 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN +I++ ++K +A Y+L S+Q L + G S +++++F++KLGY Sbjct: 1 MNSYAKIKEAQSSYTSTEKVIAKYILENAADVLKCSAQSLGEKTGTSAAAIIRFSKKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK++L++ +P I I +D + + +K + N + T + Sbjct: 61 NGFSELKMSLAQ----SKRAPEEKIDFIIDENDDIVTLADKCCRLNMNTVLKTYQLIDTN 116 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L + L +A I L G+G S +VAQ+ KL +IG +D+H L ++ + + Sbjct: 117 QLDNAIKKLIAANTIYLFGVGGSAIVAQDVEQKLTRIGKKVIYNKDLHVQLTFSESMNKE 176 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D L ISY+G + L A + +++IT F PN L + + L EE+ Sbjct: 177 DAALFISYSGTTKGLVEIAKMIKNKNVPIISITQFKPNPLSKLSDIILQVPNEEKEIRMG 236 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +IS+ + ++TDLL+ + + DL +++ ++ +V K Sbjct: 237 AISSRISSLVMTDLLYYGVFKNDLTGNKDKLIETKRIVSK 276 >UniRef50_C2D3P4 RpiR family transcriptional regulator (Fragment) n=3 Tax=Lactobacillus RepID=C2D3P4_LACBR Length = 281 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 121/278 (43%), Gaps = 3/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + ++Q + L++++KK+A Y++ P A + + LA S +SV + + LGY Sbjct: 3 SPVQMLKQSFDNLSRTNKKIAKYVIDNPQAASEANIEDLAAVTETSTASVSRLVKTLGYS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F L+L+ +Q ++PI I +D L + +K+ + A+ T E + Sbjct: 63 NFREFTLSLA---YTQLRPQNLPIFKDIDANDTLSTIADKIFTSSQRALQDTREGIDENE 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 V + RR+ G+G S + A + K ++ + D L DD Sbjct: 120 FARSVLRIIHCRRLGFFGLGGSSVAALDGYHKFLRTSIDCFYYPDFDVQLMQAVKLGEDD 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + +S++G R+ A+ + R V+AIT + + L + + ++E S Sbjct: 180 CAIVVSHSGKNRQTIKIAETLKRRKVPVIAITSYQDSPLVGHSDITFISSSDESNYRSEG 239 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + + AQ + D LF+ + + IR + +++ Sbjct: 240 MYSLLAQLTIIDTLFMMATVRMGPATEDTIRSVQNIIE 277 >UniRef50_Q02VU4 Transcriptional regulator n=4 Tax=Lactococcus lactis RepID=Q02VU4_LACLS Length = 282 Score = 202 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 65/281 (23%), Positives = 135/281 (48%), Gaps = 6/281 (2%) Query: 1 MN--GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 M+ + RIR Y L++SD+ ++DYL+ D+A LS Q+ A + VS +++ +F++K+ Sbjct: 1 MSRTLISRIRSYYDNLSKSDQAISDYLIANIDSAAMLSIQEFAQKTQVSTATISRFSKKI 60 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 G+ F LKLA+ + + +++ D + + K N +++ +TLN+ S Sbjct: 61 GFNSFQELKLAI----HATDSTRDDEFFSELSPTDDYKEILTKNFNGNISSLNSTLNLIS 116 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 +L + + +L A G+G S VA K +++ + +D H + Sbjct: 117 NRQLDQTMEILLKANTCGFFGLGGSNAVALIAFHKFLRMPLHCVYHQDFHFQQMQAAKLT 176 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 +D IS+TG ++ + + G ++A+T F + L + A L +I+EE + Sbjct: 177 SEDCAFVISHTGKNKDTMHLVEILKSRGVPIIALTSFASSPLAKAADVALISISEEISFR 236 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++++ +Q L D LF+ + +++ + ++ Sbjct: 237 PEAVASTVSQISLLDALFMMYGMKMKDVSEGTLSEIRKVIS 277 >UniRef50_Q9CKN4 Putative uncharacterized protein n=1 Tax=Pasteurella multocida RepID=Q9CKN4_PASMU Length = 286 Score = 202 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 109/283 (38%), Positives = 167/283 (59%), Gaps = 3/283 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L++++ Y L+ +++++AD++L P + SS+ LAN+ VSQS+++KF+QKLG Sbjct: 1 MGFLIKLKHTYPSLSPNEQRIADFILKHPHEVKSSSSKALANQIAVSQSAIIKFSQKLGA 60 Query: 61 KGFPALKLALSEALASQPESPSV--PIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 F KLA+SEAL Q +H+ I D L + EKL E A+ +L++N+ Sbjct: 61 DKFSDFKLAISEALIRQETQSEPRVHLHDSITDKDDLSEIAEKLFVEKQQALKESLSLNA 120 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 + V L A+RI L GIG S LVA++F +KL KIG D HA LA Q+ + Sbjct: 121 IPYVARVVEQLMQAKRIQLMGIGNSALVAKDFFYKLTKIGLPVVTETDTHASLAMSQSLT 180 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P D+L IS++G RE+ LAA+ K++A+T T N L + A + LY++A+E Sbjct: 181 PQDILFLISFSGRHREILLAAENAKARQIKIIALTALTTNPLHELADYLLYSVADESTFR 240 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+SI++ AQ +TDLLF+ ++QQ E A + I S AL+ +L Sbjct: 241 SSSIASRTAQHAITDLLFMGILQQ-KEHANDLILESRALIGQL 282 >UniRef50_C9AZQ1 Phosphosugar isomerase transcriptional regulator n=2 Tax=Enterococcus casseliflavus RepID=C9AZQ1_ENTCA Length = 283 Score = 202 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 75/279 (26%), Positives = 132/279 (47%), Gaps = 3/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L+I+ Y+ L+ ++ +ADY+L P H S L+NE G++ S+ +F +KLGY Sbjct: 4 SIRLQIKTLYKDLSLKEQAIADYILENPSKVSHSSISDLSNELGIADSTFFQFTKKLGYN 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF K+A+ L + + ++ IH I+ D + +K+ N + T N+ EE Sbjct: 64 GFKDFKMAM---LMQENDFSAISIHENIQKSDNELTMAQKVFDSNMTTLTDTKNLLKEED 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L M+ ++R+ G+G S +VA + K ++ D H L +PDD Sbjct: 121 LKLAAAMINQSKRLFFFGVGGSEIVATDAYHKFLRSPITVFHSSDYHIQLMEASLLTPDD 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + IS+TG RE A G K++ IT + L + +I+EE S + Sbjct: 181 CGIFISHTGKSRETIELAQVAKNNGAKIIVITSHAASPLAKLGDVVFISISEETEFRSEA 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +++ AQ + D L++ L+ + + A + I + K Sbjct: 241 LASRIAQLSIMDSLYVILMFINRDKAQQSIAKIRRSISK 279 >UniRef50_A8RWE9 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RWE9_9CLOT Length = 301 Score = 202 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 70/276 (25%), Positives = 131/276 (47%), Gaps = 4/276 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R+ ++ L++ + + A+Y+ + + S LA AG S+++V + KLGY+G Sbjct: 25 LYDRVEEKRGSLSKKELETAEYMAAHQEQLIYSSITDLAERAGSSEATVTRVCGKLGYRG 84 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F ALK+ ++ +P IH + D P ++ EK+ + T + + + Sbjct: 85 FQALKVGVARE----LTTPQEKIHENLEADSPAEVIIEKIFSSAIETLSMTQKSINVKAV 140 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + L ARRII+ G G S +A + K +++ NA A D H + V + + D+ Sbjct: 141 AASIDALCRARRIIIIGNGNSASIAADAQHKFLRLDLNAHAYTDDHMQMIAVSSMTDQDV 200 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 LLAISY+G R + AA + G V+++T + + + A CL T ++E + +I Sbjct: 201 LLAISYSGSSRNVVEAAHQAKEQGATVISLTNEGSSPVSKLADICLNTYSQETRYRTYAI 260 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 S+ A+ + D ++ + + + A E + Sbjct: 261 SSRMAELTIIDTIYTGVALRLGDKAIANFEALERAL 296 >UniRef50_B6GA31 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GA31_9ACTN Length = 281 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 82/273 (30%), Positives = 141/273 (51%), Gaps = 2/273 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L+R++Q + ++++L + +L P++ LS +LA A VS S++ + +KLG K Sbjct: 3 SLLVRLKQYRDNASPAERELIERILDDPESISGLSIHELAAYAFVSPSTITRLCKKLGLK 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + L LA ES S I + D R EK+ ++N ++ +N E Sbjct: 63 GYKEFQHLLIYDLALLRESSSSKIE-DLAPTDTSRQTIEKVTRDNIDSLRLVEKLNDPET 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 CV ++ AR I L G+GAS L A++ +KL++IG + + D H L S P+D Sbjct: 122 YEACVDLMSDARTINLFGMGASLLSARDMHYKLLRIGVSCNLIDDWHGQLLCASNSGPED 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT-PNALQQRASHCLYTIAEEQATNSA 240 L +AISY+G+ E+N+ GGKV+AITG + L ++A L + E SA Sbjct: 182 LSIAISYSGLTEEVNVCVGRARERGGKVIAITGSAFDSKLARQADEVLLVGSTEPLMRSA 241 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRH 273 ++++ Q + D+LF + + ++ E + Sbjct: 242 AMASRIGQLGVIDILFKSFVNRNYARFSEVLEQ 274 >UniRef50_Q04DU1 Transcriptional regulator n=2 Tax=Oenococcus oeni RepID=Q04DU1_OENOB Length = 282 Score = 200 bits (510), Expect = 3e-50, Method: Composition-based stats. Identities = 73/279 (26%), Positives = 132/279 (47%), Gaps = 4/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N IR Y+ L +K++ADY+L D+ + Q L+++ G+S +S+ +F + LGY Sbjct: 3 NVTETIRSYYEKLHPGEKRIADYILSHQDSVMDATIQSLSDKIGISTASISRFTRHLGYP 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F +ALS ++ S +I+ D + +KL AA+ AT + + Sbjct: 63 NFRDFLIALSA----SKKNSSSDFFTEIKQSDQSEQIVKKLFSAGIAALTATAANINMKD 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V L S+ +I GIG S +VA N K ++ N + D + + +D Sbjct: 119 LDRVVDWLVSSNKIGFFGIGGSSIVAFNAYHKFLRTNLNIVSHPDYDIQIMQAAHLTSED 178 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L + IS++G ++ L +++ G K++AIT F + + + A L + +EE S Sbjct: 179 LGIVISHSGRNQDTLLVENKLRENGSKIVAITAFPESPIAKNADIVLNSYSEEVNFRQES 238 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +S+ AQ + D LF + + E + I ++++ Sbjct: 239 MSSLVAQITIIDTLFTLVGHRLNEQTDQVINSMRRVIEQ 277 >UniRef50_A8F3D9 Transcriptional regulator, RpiR family n=1 Tax=Thermotoga lettingae TMO RepID=A8F3D9_THELT Length = 276 Score = 200 bits (510), Expect = 3e-50, Method: Composition-based stats. Identities = 65/283 (22%), Positives = 133/283 (46%), Gaps = 13/283 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + I+ + + + +LA +++ PD H+S ++ +E + Q +VV+F QKLG+ Sbjct: 4 DVQTIIKANQKQFTKKENELAQFVIDHPDEVIHMSITEIVDELRIGQGTVVRFCQKLGFS 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN--SE 119 GF K+AL+++L Q + + + + +++ A+ T + +E Sbjct: 64 GFHPFKIALAKSLGRQE-----------EASEGSKDMLAMVKEDHIKAIEETSKLLKLNE 112 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + +++C + + RR+ L G+GASG+ A + +K M+IG + + D H ++ + Sbjct: 113 KVVYQCAEKISNCRRLYLLGVGASGVTALDAYYKFMRIGVDVKYMLDPHFQAMSLSGCNE 172 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D ++A S +G + A + V+A+TG+ + L A L T E S Sbjct: 173 KDCVVAFSQSGSTAVVVDMAQIAKQNKACVIAVTGYNKSPLTFYADFVLLTAVRENPFQS 232 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 +I + AQ + ++LF + A + + + V+K + Sbjct: 233 GAIRSKIAQLHVLEVLFEQTKLLLADKAKQNVDRTARSVEKWI 275 >UniRef50_C2JLW7 Bifunctional RpiR family transcriptional regulator/sugar isomerase n=22 Tax=Enterococcus faecalis RepID=C2JLW7_ENTFA Length = 290 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 70/281 (24%), Positives = 138/281 (49%), Gaps = 5/281 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N +L I+ R Q L +S++K+A+Y+L +T +++Q+LA +AG S +++++F + Sbjct: 12 NIVLSIQDRLQQLPKSERKIAEYILKNTETVISMNAQELAKQAGSSPAAIIRFCHSMDVN 71 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LKL LS L + + ++ + + +KL + + + Sbjct: 72 GFTELKLLLSANLGQMKQQM----YTEVTKGESTADIKQKLQARFVHVVERSGQTLEDVA 127 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 ++E V +L I + G+GAS LVAQ+ K ++G D H + + ++ Sbjct: 128 VNEAVDLLEKTEVIFVYGLGASSLVAQDIYQKFTRLGRTVFTTLDHHLFASMLGSTEKPS 187 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ-ATNSA 240 + + IS +G +E + AD + G +++IT + + +++ L T + E SA Sbjct: 188 VFIVISNSGTNKEASTLADLAKQQGIPIVSITQDEKSVIGEKSDIVLQTSSGEDVPLRSA 247 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + AQ + D+LF A ++ + E+I+ S V++L Sbjct: 248 ATVSLVAQLYVVDVLFFAYAAKNYKETLEKIQISRKNVERL 288 >UniRef50_C4DDH7 Transcriptional regulator, RpiR family n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DDH7_9ACTO Length = 342 Score = 200 bits (509), Expect = 4e-50, Method: Composition-based stats. Identities = 72/280 (25%), Positives = 123/280 (43%), Gaps = 2/280 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L+R+R GL S++++A+ +L P L+ +LA S ++VV+F Q++GY Sbjct: 12 VLVRVRAALPGLRPSERRIAEAILDDPHATAGLTVAELAAACDTSTTTVVRFYQRIGYGR 71 Query: 63 FPALKLALSEALASQP--ESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + L+L L+ + + I DD + + K+ T ++ T + + Sbjct: 72 YKDLRLDLTREATREQLETANLPAASGDIDRDDTIDDIIAKVAANETLSIADTAEILDRD 131 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L V + +ARR+ G+GASG V + KL +IG A + D A + Sbjct: 132 ALARAVDCVLNARRVDSFGVGASGFVGLDLQQKLTRIGRTALSWLDTDAAWSAAVTLDEQ 191 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 + +AIS+TG G +AIT AL + A L T A E S Sbjct: 192 CVAIAISHTGTTAATVEFLAMAAAEGATTIAITNHDNTALAETADVVLTTAARETRFRSG 251 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ + AQ M+ D LF + + + + +R + A V + Sbjct: 252 ALGSRIAQLMVVDCLFTGVARASYDASMSALRKTYAAVHR 291 >UniRef50_A6LVH8 Transcriptional regulator, RpiR family n=8 Tax=Firmicutes RepID=A6LVH8_CLOB8 Length = 282 Score = 200 bits (509), Expect = 4e-50, Method: Composition-based stats. Identities = 69/277 (24%), Positives = 134/277 (48%), Gaps = 3/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L+I+ Y GL+ ++ +ADY+L P + H S L++E V+ S++ +FA+KLGY Sbjct: 4 SVRLKIKSLYNGLSAKEQNIADYILENPISVAHNSISYLSDELNVADSTLFQFAKKLGYS 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF K+A+ + + IH +I DD + +K+ N + T + + Sbjct: 64 GFKEFKMAILIE---ENNFSTTSIHEKIEIDDNELTMAQKVFDSNIKTLTNTKKILGLDD 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + ++ ++ + G+G SG++A++ K ++ + D H L +P D Sbjct: 121 LKKAAEIISNSNLLYFFGVGGSGILAEDAYHKFLRSPAHVRHSTDYHIQLMEASLLTPQD 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + IS+TG +E A+ + G KV+ IT + L + +I+EE +S + Sbjct: 181 CAICISHTGKSKETIRIAEIVKEAGAKVIVITSHASSPLAKIGDVVFISISEEIEFHSEA 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +S+ +Q + D L++ L+ + E + E + + Sbjct: 241 LSSRISQLSILDSLYVILMFMNKEKSKEALSKVRRTI 277 >UniRef50_B5I8T9 Sugar isomerase n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I8T9_9ACTO Length = 312 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 68/278 (24%), Positives = 121/278 (43%), Gaps = 2/278 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + IR LA S +K+ + +L P H S+ +L G SQ++V +F + +G + Sbjct: 23 DVTTLIRTELPRLAGSLRKVGELILEDPAAVTHCSAAELGRRTGTSQATVTRFCRAIGLE 82 Query: 62 GFPALKLALSEALASQP--ESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 + L + L++ + S I I DD L V + + + A+ T+ Sbjct: 83 SYQHLLIELAQERGRGEVSDWGSAEIGPDISPDDSLERVVQVVGSADLRAIQQTIERIDL 142 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L L ARRI + G+G SG VAQ +L +IG ++H + +P Sbjct: 143 DALERAAQALAKARRIDVYGVGGSGAVAQETETRLFRIGCQVRGWTEVHGAATSAALLTP 202 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+ + IS++G RE + G +AIT + L + A L + E + + Sbjct: 203 ADVAIGISHSGATRETLEPFEMAKERGATTIAITTDPRSPLAKAADIRLISATSETSFRT 262 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 SI H+ M+ D L++ + Q + A + ++ + Sbjct: 263 GSIGGRHSVLMIVDCLYVRVGQVAYQRASASLALTDHI 300 >UniRef50_C3RKW6 Sugar isomerase n=3 Tax=Bacteria RepID=C3RKW6_9MOLU Length = 291 Score = 199 bits (507), Expect = 7e-50, Method: Composition-based stats. Identities = 64/282 (22%), Positives = 124/282 (43%), Gaps = 3/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + ++ + S+K +A Y+L + +LS ++LA + S +++V+ +KLG Sbjct: 1 MSIMTQLEFELD-FSSSEKTIAKYILDNGEDILNLSVKELAKQTYTSPATIVRLCRKLGL 59 Query: 61 KGFPALKLALSEA-LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ K+ S + V ++ D + ++ + A+ TLN+ Sbjct: 60 NGYGDFKIKYSAELQFDKKNKKRVDVNFPFGNTDSNSQIAYRIANLHQEAIEDTLNLVDF 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L + + +L ARRI L G G S L +F K+M+IG SP Sbjct: 120 KNLDKIINLLDQARRIYLFGNGNSLLAGFDFQHKMMRIGKMVEMRAHAGEQGFLSYTCSP 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN- 238 DD+ + ISY+G E+ A + ++ +L IT N L + ++ + T + E+ + Sbjct: 180 DDVAILISYSGETNEMVELAKFLKKMHVPLLGITSIGDNQLSKYCTYIMNTGSREKIFSK 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A S+ + L DL+F + + + + + + L Sbjct: 240 IAPYSSKTSISYLLDLIFSCIFRLNYDHYINEKINRDKLFDH 281 >UniRef50_Q184N2 Putative phosphosugar-binding transcriptional regulator n=4 Tax=Clostridium difficile RepID=Q184N2_CLOD6 Length = 283 Score = 199 bits (506), Expect = 9e-50, Method: Composition-based stats. Identities = 78/281 (27%), Positives = 149/281 (53%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ +L+++Q Y+ L + DKK+ADY+L + LS +LA+ + S +S+V+F++K+GY Sbjct: 1 MSCILKLKQIYEDLTEVDKKIADYILNNTEAISKLSVSELASNSKTSTASIVRFSRKMGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+ +++ L + + N D V K+ +N + T +N ++ Sbjct: 61 SGFGDLKIEIAKDLMGKENEYTYVDENYDCNIDS---VINKITNKNIETINQTRLLNEKD 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + E V + A+ + + G+G S LVA + KL++I A D H L + Sbjct: 118 IIKEAVEQIIKAKNVYIFGVGGSALVALDLQMKLLRINKQAFTSLDSHTQLMVSSNVDKE 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ +AISY+G +E+ + + G KV+ IT ++ N L + + L E+ Sbjct: 178 DIAIAISYSGESKEVIKSIENAKLKGCKVICITKYSDNHLSKISDLKLVVPNIEKRLREG 237 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +IS+ A L D+++I++IQ++L A ++++ ++ ++ L Sbjct: 238 AISSRIAMLTLIDIIYISIIQENLNEAEQKLQETKRILDYL 278 >UniRef50_D1AUV3 Transcriptional regulator, RpiR family n=5 Tax=Bacteria RepID=D1AUV3_STRM9 Length = 272 Score = 198 bits (504), Expect = 1e-49, Method: Composition-based stats. Identities = 53/280 (18%), Positives = 124/280 (44%), Gaps = 11/280 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + I+ Y ++ + K+ADY++ + D + ++ + VS++++V+F +K+G+ Sbjct: 1 MKYITLIQSFYPSFSKQEIKVADYVIKEKDAICFMPLHEITKKINVSEATIVRFVKKIGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGF KL ++ I + E + + T N+ ++E Sbjct: 61 KGFIDFKLEVARE-----------IATIEDERNTKEHYIENIEYNIIETIKNTKNLINKE 109 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + + +++++ + G+GASG+ A F + M+ G +V D H + ++ Sbjct: 110 DVENAIEAIENSKKLYVFGMGASGVAALEFQNRFMRFGKIGHSVSDGHFQVMYASTTTEK 169 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ IS +G +L G K++AIT + + + + + + T +E N Sbjct: 170 DVIVVISLSGETVDLIYPLSIAKENGCKIIAITNYILSPIAKLSDIVILTSGKETLLNGG 229 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ + +Q + D+L ++ + A + + Sbjct: 230 ALVSKMSQLYIIDVLATGYALRNSKKAKLVRQGMAEAIAN 269 >UniRef50_Q3JNN8 Transcriptional regulator, RpiR family n=54 Tax=Burkholderiaceae RepID=Q3JNN8_BURP1 Length = 339 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 72/278 (25%), Positives = 128/278 (46%), Gaps = 5/278 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RI L S++KLAD++L P LS +LA AG SQ ++ +F Q LG G Sbjct: 8 MLPRIETIRAQLRPSERKLADFVLAAPREVLDLSMTELAARAGASQPTIARFCQALGCSG 67 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F K+ L++++A S + R + K+ A+ N S + Sbjct: 68 FREFKIRLAQSVAPGVASVYRDVEPDERAPG----IIGKVFDRTIGALIEVRNSLSATSV 123 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 E + +L A RI G G SG+ AQ+ K ++G + A D H + +D+ Sbjct: 124 AEAIELLTRASRIEFYGAGGSGIAAQDIQHKFFRLGVPSVAYSDPHTFSMSAALLGANDV 183 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++AIS TG R++ AA L G KV++IT + + L Q ++ L + E+ + + Sbjct: 184 VVAISNTGRTRDIVDAARAALACGAKVISIT-HSHSPLAQLSTVSLASNVAEETDVFSPM 242 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ + + D+L + + + +R+ ++ + + Sbjct: 243 TSRMSHLAIGDILAVGVALRRGPELVDRLGRAKEAITR 280 >UniRef50_A6UCC0 Transcriptional regulator, RpiR family n=4 Tax=Proteobacteria RepID=A6UCC0_SINMW Length = 296 Score = 198 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 68/280 (24%), Positives = 112/280 (40%), Gaps = 5/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L IR R L +SD+K+A+ +L P + + + A AGVSQ +V++F +G + Sbjct: 16 NILEVIRLRRADLRKSDRKVAELVLADPKRVINATIAEAAEWAGVSQPTVIRFCASIGCQ 75 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ KL L+++LA H+ I D V K+ ++ N + Sbjct: 76 GYQDFKLRLAQSLALGMS----ATHSVIDASDTPAQVSAKIFDYTITSLDWVRNHLDPVQ 131 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + L A RI G GASG+VA++ K G A D H + V P D Sbjct: 132 VSRAIDALSKASRIEFFGFGASGIVARDAQQKFPLFGVPCGAETDAHQQIMVVSMLKPGD 191 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS TG + A G +V+ I G L + L E Sbjct: 192 VAVVISNTGATLAIIETARRARESGCQVIGIVGS-DGPLVEFCDIVLMVETLENTNIYTP 250 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + A + D+L ++ + + + ++ L Sbjct: 251 TISRIAALTVIDILSTSVALRRGAEHVDLFTGMKRNLRYL 290 >UniRef50_C2D9S0 RpiR family transcriptional regulator n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9S0_9ACTN Length = 282 Score = 198 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 65/273 (23%), Positives = 128/273 (46%), Gaps = 2/273 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L+ +++ ++ S++++ Y+L +P+ ++ +LA VS +++ + +KL Sbjct: 5 SLLVLLKENKDRVSTSEQQIITYILKKPEAIVGVTIHELAQMTFVSAATISRLLRKLSLG 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + L LAS S I I D + + K++++ ++ T +N+ + Sbjct: 65 GYKEFQQYLIYELASMKTSRQSSIE-DINPKDSTKQIMFKIMRKTIESITLTEKLNNPKT 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + C ++ +AR I + G+G+S L AQ+ +K ++ + D H L S D Sbjct: 124 IDSCAELIHNARHITIFGMGSSLLSAQDLQYKFLRANIDCTLSADWHMQLIAANNMSDGD 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNA-LQQRASHCLYTIAEEQATNSA 240 + +A SY+GV E GGKV+AIT + L + A LY + E S+ Sbjct: 184 VAIAFSYSGVTPETLRCVHAAQDHGGKVIAITRSVNSTELVRHADIVLYVASTEPLLRSS 243 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRH 273 + ++ Q M+ D LF L+ + ++ I Sbjct: 244 AGTSRITQLMIVDTLFSTLVNKHYDVYATAIED 276 >UniRef50_B1YJ20 Transcriptional regulator, RpiR family n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YJ20_EXIS2 Length = 284 Score = 197 bits (502), Expect = 2e-49, Method: Composition-based stats. Identities = 81/280 (28%), Positives = 139/280 (49%), Gaps = 5/280 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +I ++ L S +K+AD++L + ++ LA E+G S ++VV+F + LG KG Sbjct: 5 IFSQISAVHEELPSSSRKVADFVLAHMNEIAGMTIHHLAEESGTSAAAVVRFCRALGLKG 64 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 +P L++ +S A + ++ I ++ + EK + + A+ T SE+++ Sbjct: 65 YPELRMRISADTART----DLKGYHDIEKNERPADLVEKTVSNSIQALQDTAKQLSEDRI 120 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 E +L AR I GIGAS +VA + A K ++G D H + + +S DD+ Sbjct: 121 AEAADVLDQARAIYFYGIGASNVVALDAAQKWTRVGKLTIQESDQHLVATILANASQDDV 180 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSAS 241 AISY+G E+ G KV+++T F N + Q A L+T A E SA+ Sbjct: 181 FFAISYSGETEEVVELIRLAKIRGLKVISLTRFGDNRVSQLADIALWTSRAPEAPLRSAA 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +S+ AQ D+LF++ + ER++++ VK L Sbjct: 241 LSSRLAQLFAIDVLFLSYAAVHYDDTIERLQYTRESVKML 280 >UniRef50_A4VXR0 Transcriptional regulator n=5 Tax=Streptococcus suis RepID=A4VXR0_STRSY Length = 275 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 75/279 (26%), Positives = 130/279 (46%), Gaps = 7/279 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + + L ++ KL DY+ ++ QLA+ AGVS +++ + ++K+GY Sbjct: 1 MN-RNILNHSIENLTPTENKLLDYIEENIHRIETMNIYQLADNAGVSTATISRISKKMGY 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F LK+ +++ ++ D + + KLI T + T++ + E Sbjct: 60 SNFNKLKIEIAK------SKYDDLLNAHFTPSDSIDDISTKLIHSITISNQQTVSFLNLE 113 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L V +L+SA RI L G+GASG+V +F +KL +IG +D H +A + + Sbjct: 114 ELEAAVKLLQSASRIYLFGVGASGIVCSDFYYKLSRIGKTCIFAQDTHIQMANIATAGNG 173 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL + ISY+G+ +E+ G + ITG N L A E Sbjct: 174 DLAIGISYSGMTKEVVEPLRFAKENGVSTITITGTGKNQLADLADITFRIPRHEHELRVG 233 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +I++ LTDLL++ALIQ + + ++ L + Sbjct: 234 AITSRSNSLFLTDLLYLALIQDHKQEITAILEQTKHLTE 272 >UniRef50_C3WE65 Transcriptional regulator n=5 Tax=Fusobacterium RepID=C3WE65_FUSMR Length = 284 Score = 197 bits (500), Expect = 4e-49, Method: Composition-based stats. Identities = 88/266 (33%), Positives = 150/266 (56%), Gaps = 1/266 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L++I ++ ++KK+ +Y+L PD + L++ +LAN SQ++VV+FA++LG+ Sbjct: 1 MGVLIKINSMLDNISSTEKKVGEYILENPDKIKDLNTYELANITKTSQATVVRFAKRLGF 60 Query: 61 KGFPALKLALSEA-LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 KGFPA KLALS+ + ES +H +I+ DD ++G K+ EN A+ T V Sbjct: 61 KGFPAFKLALSQDLGNRKAESHVNIMHEEIKPDDSFEIIGRKISNENITAISDTYEVTDF 120 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 +L + V ML AR+I+L GIG SG+VA++F +KL+++G +A D H L+ + Sbjct: 121 TELEKAVVMLSKARKIMLAGIGFSGIVAKDFYYKLLELGKHAMIEVDTHMQLSCLSTMGE 180 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD+L IS++G E+ G V+A+T PN ++ A L T+ S Sbjct: 181 DDVLFVISHSGKTMEMYNVVKVAKSKGITVIAMTSIAPNPIKDLADIRLNTVEMNSNFRS 240 Query: 240 ASISACHAQGMLTDLLFIALIQQDLE 265 ++S +Q + D+L++ ++ ++ Sbjct: 241 TALSPRISQLTVIDMLYVKMMLENKN 266 >UniRef50_C1I531 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I531_9CLOT Length = 284 Score = 197 bits (500), Expect = 4e-49, Method: Composition-based stats. Identities = 69/272 (25%), Positives = 135/272 (49%), Gaps = 1/272 (0%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 L +++ K+ DY+ +++ +++ ++AN GV +++V +F +KLG++ F K+ + Sbjct: 9 RSELTKAENKICDYIEEYMNSSIYMTVTEIANNCGVGEATVTRFCRKLGFRSFLEFKMTM 68 Query: 71 SEALASQPESPSVPIHNQI-RGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTML 129 ++ + I +++ +D L +K + N ++ TL + E +L Sbjct: 69 AQEFKNSGYDNEDIIESEVVSENDSLGEFVKKFYEINVNSLEETLKKIDYSMIEEISDIL 128 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYT 189 A+RI TG+G SG++A++ +K MKIG RD H L+ D+L IS + Sbjct: 129 VKAKRISFTGVGHSGIIAEDAYYKFMKIGLICNCYRDSHTLVMMASLMKEGDVLFIISNS 188 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQG 249 G E+N+AA+ KV++IT + L + + + L +E + S +Q Sbjct: 189 GNTEEINIAAEIARENNVKVISITENLLSKLARVSDYVLNYTDQEIKIDMESFGIRISQN 248 Query: 250 MLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 L DL+ +I+++ E+A +E ++KL Sbjct: 249 FLIDLICTNVIRKNKEIAVVSKSKTEKAIEKL 280 >UniRef50_UPI0001693BD8 YbbH n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001693BD8 Length = 265 Score = 197 bits (500), Expect = 4e-49, Method: Composition-based stats. Identities = 70/260 (26%), Positives = 127/260 (48%), Gaps = 3/260 (1%) Query: 21 LADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPES 80 LA Y++ + +LA + S +++ +F + L ++GF KL LS LA QP Sbjct: 2 LASYIVEHAHEVVSMGITELAERSQTSPATISRFCKSLHFQGFTDFKLKLSGELAKQPSE 61 Query: 81 PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGI 140 S + I +PL + + + ++ T +N ++L + V+ L++AR+I L G+ Sbjct: 62 HS---YQDIVAGNPLSEIVSAIEANHLRSIADTTQLNDIKQLQQAVSALKNARQIDLYGV 118 Query: 141 GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAAD 200 SG+VAQ+F KL++IG + D H + + +D++ AISY+G E A Sbjct: 119 ATSGIVAQDFYQKLVRIGKRTSVFSDPHMQITSASNLGENDVVFAISYSGDTEETIQALR 178 Query: 201 EMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALI 260 G +++T F N L + L+ E+ +++ AQ + D+LF +L+ Sbjct: 179 CAKERGAVTISLTKFGTNPLANLSDIRLFASTLEEGMRRGDMASRIAQLHVIDILFTSLV 238 Query: 261 QQDLELAPERIRHSEALVKK 280 ++ + R+ S LV+K Sbjct: 239 SEEFDELIPRLERSYQLVRK 258 >UniRef50_P26833 Uncharacterized HTH-type transcriptional regulator CPE0189 n=15 Tax=Clostridiales RepID=Y189_CLOPE Length = 279 Score = 197 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 67/278 (24%), Positives = 142/278 (51%), Gaps = 2/278 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L ++ +S+K L +Y+ D + S +A E+GV ++++ +F +KLG+ Sbjct: 1 MGILEQLENPKFKATKSEKTLIEYIKSDLDNIIYKSISIIAKESGVGEATITRFTKKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF K+ L++ ++++ + I+ + D+ + K++K + + T+ + Sbjct: 61 NGFQDFKVTLAKEISNKKN--TSIINLHVHRDESVTETANKMLKSSINILEQTVKQIDLD 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + +C ++ +A+R+ GIG SG+ A + +K M+IGF V D H ++ ++ D Sbjct: 119 LMCKCRDLIMNAKRVYFIGIGYSGIAATDINYKFMRIGFTTVPVTDSHTMVIMSSITNDD 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++AIS +G +E+ + G K++ +T + N L++ + + L + E + Sbjct: 179 DVIVAISNSGTTKEVIKTVKQAKENGTKIITLTEDSDNPLRKLSDYELTYTSAETIFETG 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 SIS+ Q L DLL+ +I++ A E+ + + + Sbjct: 239 SISSKIPQIFLLDLLYTEVIKEMFSEAVEKKIKTTSAI 276 >UniRef50_A9BH25 Transcriptional regulator, RpiR family n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BH25_PETMO Length = 283 Score = 197 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 58/284 (20%), Positives = 130/284 (45%), Gaps = 5/284 (1%) Query: 1 MN-GLLRIRQRYQGLAQSDKKLADYLLL-QPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 M+ + R +S+KK+A+Y+L + + ++ +LA + G S++++ +F +K Sbjct: 1 MSKIQAFLNSRMPTFTKSEKKVAEYILNSKKEDITRITITELATKCGTSEATIARFVKKA 60 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 G++ F KL L+ + I +D + + K+ + ++ +T ++ Sbjct: 61 GFETFQDFKLTLALDN--NEDIFEEEKDITIFKNDSPQEILRKVKLGSLKSIESTTSILD 118 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 + +RSA+RI + G+G+S VA+ +KL ++GF + A+ D H + + Sbjct: 119 INNFLQAANFIRSAKRIEIYGVGSSSAVAKILQYKLTRLGFPSYALEDPHMQAISAATLN 178 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 DL + IS +G ++ + + + G +++T + + + + L + E Sbjct: 179 FGDLAIGISQSGSTKDTVDSLNVAKKHGATTISLTEHANSPITKYSDVVLEIFSGENPVK 238 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHS-EALVKKL 281 +++ + Q ++L L + E A + + A+V KL Sbjct: 239 TSAGRSILVQIFAVEILSGLLYSIEYEKALTTGKDTARAVVNKL 282 >UniRef50_C8W838 Transcriptional regulator, RpiR family n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8W838_ATOPD Length = 304 Score = 197 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 75/270 (27%), Positives = 135/270 (50%), Gaps = 2/270 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 LR+ + + + +++ + DY+L P+ S +LA + S S+VV+ +KLG G Sbjct: 4 VRLRLEEYRKNASSAERDIIDYILSDPEAVVGQSIHKLAAQTYTSASTVVRLCKKLGCGG 63 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + + AL LA +S + + I D ++ EK+ +N +++ T+ + + + Sbjct: 64 YKEFQQALIYELAVSNKSNDIAVGGVIA-GDTTDVIIEKVTAKNISSLELTMQLLDAQVV 122 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V+++ A I L G+GAS LVA++ KLM++ N D H+ L + S +DL Sbjct: 123 DSVVSLMMQAHSICLFGMGASLLVARDLQLKLMRLNINCNLSDDYHSQLLYAKNMSREDL 182 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAIT-GFTPNALQQRASHCLYTIAEEQATNSAS 241 + +SY+G+ RE A G KV++IT G + L R+ + L E S + Sbjct: 183 AIVVSYSGLTREAIECAWIAKANGAKVISITRGGIDSELIHRSDYVLGVAETEHIMRSGA 242 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERI 271 +S+ AQ + D LF A + ++ E + +R Sbjct: 243 MSSRIAQLNVVDALFAAYVNRNYEKSVKRF 272 >UniRef50_Q9K6Z8 Transcriptional regulator (Hex regulon repressor) n=2 Tax=Bacillus RepID=Q9K6Z8_BACHD Length = 284 Score = 196 bits (498), Expect = 7e-49, Method: Composition-based stats. Identities = 68/278 (24%), Positives = 137/278 (49%), Gaps = 2/278 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +I Q ++ K+A+Y+L P+ ++++QLA +A SQSS+V+F ++LG + Sbjct: 6 LLAKIEQELASFPAAETKVANYVLKHPELVPTMTTKQLAEQANASQSSIVRFCKRLGLES 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 FP LKLAL++ L + + + + DD ++ +K+ N A+ +E+ Sbjct: 66 FPKLKLALAKELTRKEAYINS--ASLLETDDSPPILFQKVSSLNQMALDMATKAMNEQAF 123 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 E V + A++I G+G S + +K M++GF++ A D H ++ + D+ Sbjct: 124 TEAVEQMVKAKKIAFFGVGGSFTSCIDGQYKFMRLGFHSLASGDYHQMIPFITMMDEQDV 183 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ +S +G +E+ AD K++ IT + +AL ++A+ L E SI Sbjct: 184 VICMSTSGNTKEVLDIADYAKERNVKLIGITASSRSALTRKAAVSLLIPDIEVQQRIGSI 243 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ +Q + D L++++ + + S ++ Sbjct: 244 ASRTSQLNVIDALYVSVFHRIGSDLLDAFDASRKKTEE 281 >UniRef50_P37767 Uncharacterized HTH-type transcriptional regulator yfhH n=149 Tax=Enterobacteriaceae RepID=YFHH_ECOLI Length = 282 Score = 196 bits (498), Expect = 8e-49, Method: Composition-based stats. Identities = 282/282 (100%), Positives = 282/282 (100%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY Sbjct: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE Sbjct: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD Sbjct: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA Sbjct: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV Sbjct: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 >UniRef50_A9M040 RpiR/YebK/YfhH family transcriptional regulator n=24 Tax=Neisseria RepID=A9M040_NEIM0 Length = 282 Score = 196 bits (498), Expect = 8e-49, Method: Composition-based stats. Identities = 80/278 (28%), Positives = 132/278 (47%), Gaps = 4/278 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +I + L+ +++K+A+ L +P H + ++A A VSQ +V++F + LGYKG Sbjct: 1 MLSKISESLANLSGAERKVAECALAEPKWFVHAAVAEIAERASVSQPTVIRFCRSLGYKG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 P KLALS ++ + +H ++ DD + V EK++ A++ E +L Sbjct: 61 LPEFKLALSASIGHEGMPY---VHEELNADDDMASVVEKVLGNAAASLLGERRFLKESEL 117 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + L ARR+ G+G SG+VAQ+ K + G + A D H L S D+ Sbjct: 118 ENAIATLMHARRVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYVDTHTQLMAASVLSDQDV 177 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L+AIS TG EL A G V+A+T + L Q A L +E A + Sbjct: 178 LVAISNTGSSIELLDAVSIAKENGASVIALTRN-DSPLAQLADCVLSVATQENAELYTPM 236 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + Q + D+L I L + + A +++ S+ + Sbjct: 237 VSRLLQLAVIDILAIGLALRLGDAASLQLQKSKKSIHN 274 >UniRef50_C8NHI8 Probable transcriptional regulator YbbH n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NHI8_9LACT Length = 281 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 63/281 (22%), Positives = 135/281 (48%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L +I+ ++D+ +A+++ + ++++L + S ++ V+F++K+GY Sbjct: 1 MSVLYKIKSSMSAFTETDRSIAEFVFVNRQVVLESNAKELGDMTKTSAAAWVRFSKKMGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG PA K+AL++ Q + I + D L + +K T + T ++ Sbjct: 61 KGLPAFKVALAKET--QSYTNEDDIETFLNPQDSLMGLLQKTENMLTQNIRETFSLLDYH 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + + + A+ + L G+G S +V +F K+ +I N RD+H L+ + + Sbjct: 119 ALEKAIEFIHEAKTVFLLGVGGSSIVCLDFYHKMTRIHQNVMYDRDLHTLMPRIAQLDKN 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITG-FTPNALQQRASHCLYTIAEEQATNS 239 D++L ISY G +N A +G +++ +T + L + L+ EE+ Sbjct: 179 DVVLVISYNGETESVNSIAKVAKTMGARIVGVTKYNLKSTLSTLSDIRLFVPVEEKEIRL 238 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 SI++ ++ +TDLL+ + + D + + + + +K+ Sbjct: 239 GSITSRNSLLTITDLLYYGIAKTDFNVTKDLLVRTRQFIKE 279 >UniRef50_D0DKU0 Transcriptional regulator n=1 Tax=Lactobacillus crispatus MV-3A-US RepID=D0DKU0_9LACO Length = 284 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 70/281 (24%), Positives = 139/281 (49%), Gaps = 2/281 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN RI + Y L +S + +AD +L P + +++++ N S +SV++F ++L Y Sbjct: 1 MNVRDRILENYTELKKSSRIIADAVLENPKILLNKNAKEIGNYTNTSAASVIRFCKQLNY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG ++ L+++ +S PI + DD V KL + + Sbjct: 61 KGLKDFQIDLAQSTV--KQSQLKPIDMIVTKDDKADEVMTKLRVSLSQNFEDLSKTIDIK 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V++++ +R + + GIGAS A++ +KL++ G D+H L + S+P Sbjct: 119 DLQKAVSLIKKSRAVYIAGIGASSFSAKDLFYKLIRSGKTVFYNDDVHIALERIYYSTPK 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ SY+G+ +EL LA + + ++A+T + + L + A L E Sbjct: 179 DVMICFSYSGLTQELLLAVKQAKKNKTPIVAVTRKSESPLSKLADINLKLPDHESLMRVG 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +I++ AQ ++++L++ I DL + + + L++KL Sbjct: 239 AINSTFAQMFISNVLYLCSISSDLGEVKQEMEATGKLLEKL 279 >UniRef50_A1AYM0 Transcriptional regulator, RpiR family n=3 Tax=Proteobacteria RepID=A1AYM0_PARDP Length = 287 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 71/276 (25%), Positives = 135/276 (48%), Gaps = 4/276 (1%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 +IR + L + ++ D + + D + +Q++ +AGVS + VVK A+KLG+ GF Sbjct: 12 AQIRMKLPFLTPLEARVVDTITGRNDLDLTTALRQVSEDAGVSDAMVVKIAKKLGFNGFR 71 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 + AL ++ +H++I +D + K+ + + A+ T+++ Sbjct: 72 DFREALV----VYRQTDVASLHSEISPEDSSADIIRKVFQTSIQALEETMSIIDVSAFDR 127 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 T+L AR+ G+G S +A++ A K ++IG A D H +L + P+D+++ Sbjct: 128 AATLLHGARQRDFYGVGGSAQIARDVAHKFLRIGLRAGVQDDPHMMLMSAALLGPEDVVV 187 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 A S++G + AA + G +V+AIT + L + A L + A+ + +A Sbjct: 188 AFSHSGTTSNVIEAARLARQQGARVIAITNYATAPLSELADIALCSTAQGSPLLGENAAA 247 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 AQ + D +F+A+ Q+DLE A ++ + V Sbjct: 248 RIAQLNIMDAIFVAVAQRDLERAEAQLARTRNAVDN 283 >UniRef50_C0D4M2 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D4M2_9CLOT Length = 282 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 67/278 (24%), Positives = 135/278 (48%), Gaps = 3/278 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 IR +Y L+ S K +ADY+L PD + ++A VS+++V++F KL Y Sbjct: 5 IFSLIRTKYNTLSSSQKDVADYILTNPDKVMMNTLNEIAAACRVSETTVLRFLHKLNYNS 64 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + ++ L++ L+ + +++ + D + +K+I +++ + + + Sbjct: 65 YQLFRINLTQELSKDNQ---ETVYDDVGFQDTEDEIIDKIIHSTVSSITDSRQIIDPASV 121 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V + ARRI++ G+GASG +AQ+ KL+K+G NA D H + + + Sbjct: 122 KAVVEKIAGARRIVVAGVGASGFIAQDLYHKLIKLGLNAVCANDPHIMNILATGLDQNTI 181 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L+ S++G RE+ A +V A+T + + L +A + L + + E S ++ Sbjct: 182 LILFSHSGESREVLDMAAIAKERRCQVCAVTSYAKSTLANQAGYLLCSSSRETMFRSDAM 241 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ Q ++ D+L+++L+ + +I S V K Sbjct: 242 TSRIVQMVIIDILYVSLVIALGDGILPQIHSSRLAVAK 279 >UniRef50_D1AG49 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AG49_SEBTE Length = 283 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 60/276 (21%), Positives = 124/276 (44%), Gaps = 2/276 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ ++++R+ ++ A Y++ D LS +LA + S +++++ +K+G Sbjct: 1 MSLIIKLREAK-NFTPNEIGAAKYIISHSDEVIRLSCTELAKKTYTSPATIIRLCKKIGI 59 Query: 61 KGFPALKLALSEALASQ-PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ K+ L+ + S + +N+I D + + +K+ + ++ T + + Sbjct: 60 GGYQEFKVILATEINFFIKNSMEINKNNEIDKKDSISDIIDKISSLSIDSLKETKILTDK 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + + M+ +A + L G GAS VA + +K M+IG A + S+ Sbjct: 120 NVVKSVIDMINNAEILDLYGSGASHFVALDANYKFMRIGKVTATYALYDQQYVQAKNSNE 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 + + SY+G E+ A + K++ IT + N L++ A LY A+E S Sbjct: 180 NHAAIIFSYSGETAEMIEIAKILTENKAKIITITKNSDNTLEKFADKSLYVTAKENLYRS 239 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 A+I + + + D+L+ A E A E + + Sbjct: 240 AAIYSRISMLNVIDILYTAYFNLIYEKALEALGKTR 275 >UniRef50_C5CG85 Transcriptional regulator, RpiR family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CG85_KOSOT Length = 275 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 61/277 (22%), Positives = 139/277 (50%), Gaps = 7/277 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +++++ Y L++S++++A Y++ +PD H + +LA + S+++V + +KLG+ G Sbjct: 2 IIVQLKGIYDSLSESERRVAKYIIERPDDVIHYTITELAKFSHSSEATVYRLVKKLGFSG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + + K++L+ L+ E + E++++EN + T+ V + L Sbjct: 62 YQSFKISLARELSIPQEVIEEGSE------GSYQNFVERIVQENISLAKETMAVLDLDAL 115 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V ++ +ARR++ G+G S +VAQ+ ++ +GF++ D HA + + +D+ Sbjct: 116 KKAVELIINARRLVFFGVGRSAVVAQSGSFNFALLGFSSTHYIDPHAQVMVASGLTNEDV 175 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ IS+TG R+ + G K + IT + + + LYT A + + S Sbjct: 176 VVGISHTGTIRDTVKSVQVAHAAGAKTIVITSGINSPITEVGDVVLYTAA-GKPSTSEFT 234 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + + ++ D+L+ ++ + E + E ++K Sbjct: 235 VSRIGEFLILDILYKTVVARMSERLSKHFDKLEEILK 271 >UniRef50_Q45581 Uncharacterized HTH-type transcriptional regulator ybbH n=7 Tax=Bacillaceae RepID=YBBH_BACSU Length = 283 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 73/279 (26%), Positives = 135/279 (48%), Gaps = 5/279 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L I+ L S++KLADY+L P A + +++ A S ++V++ + LG KGF Sbjct: 6 LAIIQSMKHKLPPSERKLADYILAHPHKAIESTVNEISALANSSDAAVIRLCKSLGLKGF 65 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 LK+ ++ P+ + I +PL + EK A+ T ++ ++L Sbjct: 66 QDLKMRVAGD----LAKPTFQGYRDIVPHEPLPSISEKTAGNAIQAIQDTSDLMDYKELE 121 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 V++L A + G+GASG+VA++ K ++I A A D H + + + + DD++ Sbjct: 122 RAVSLLLKAHTVHFIGLGASGIVAKDAQQKWLRIHKQATAFTDTHLVASLIANADKDDIV 181 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT-IAEEQATNSASI 242 AIS++G +E+ G +++T F+ ++ A LYT + E SA+ Sbjct: 182 FAISFSGETQEIVELFAMAKEKGITTISLTQFSQTSVSALADVPLYTAHSNEALIRSAAT 241 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+ AQ + D+LF+ + + E I + A ++ + Sbjct: 242 SSRLAQLFIIDVLFLGMAAEQYETTTGYIDKTRAAIQSM 280 >UniRef50_Q13K65 Transcriptional regulator, RpiR family n=7 Tax=Burkholderia RepID=Q13K65_BURXL Length = 287 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 64/276 (23%), Positives = 115/276 (41%), Gaps = 6/276 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + IR L +++K+AD +L D A S +LA A VS+ SV +F + +G Sbjct: 5 NLIPHIRSALANLRPAERKVADMVLSDVDFAMRASITELAQRAEVSEPSVTRFCRAIGAH 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G K+ L++++A + DD ++ + +K+ + + Sbjct: 65 GLRDFKMQLAQSVAGG----VPYASTAVARDDDVQTLMDKVGEAAIGGITHARGALDPAV 120 Query: 122 LHECVTMLRSARRIILTGIG-ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + L SARR+ G+G SGLVAQ+ A + +++ + A D H P Sbjct: 121 VESAIAALSSARRVFFFGVGSGSGLVAQDAALRFLRLDIASTAFTDGHLQRLYAGLMEPG 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ AIS++G E+N + G +A+T + L L + Sbjct: 181 DVAFAISHSGRSVEVNESIQIAKERGATTIALTNV-GSRLAWLVDIPLLLRVPSPIDPNT 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + + D L I + + E++RH++A Sbjct: 240 PGVSRLVHLCIMDALAIGVALKAGPKTLEKMRHAKA 275 >UniRef50_D0W145 Transcriptional regulator HexR n=3 Tax=Neisseriaceae RepID=D0W145_NEICI Length = 315 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 78/276 (28%), Positives = 132/276 (47%), Gaps = 4/276 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +I + L+ +++K+A+ L +P H + ++A + VSQ +V++F + LGYKG Sbjct: 1 MLSKISESLADLSGAERKVAECALAKPKWFVHAAVAEIAEHSSVSQPTVIRFCRSLGYKG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 P KLALS ++ + +H ++ DD + V EK++ A++ E +L Sbjct: 61 LPEFKLALSASIGHEGMPY---VHEELNADDDMSSVVEKVLGNAAASLLGERRFLKESEL 117 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + L ARR+ G+G SG+VAQ+ K + G + A D H L S +D+ Sbjct: 118 ENAIATLMHARRVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYVDTHTQLMAASVLSSEDV 177 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L+AIS TG EL A G ++A+T + L Q A L +E A + Sbjct: 178 LIAISNTGSSIELLDAVSIAKENGASIIALTRN-ESPLAQMADCVLSIATQENAELYTPM 236 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + Q + D+L I L + + A +++ S+ Sbjct: 237 VSRLLQLAVIDILAIGLALRLGDAASLQLQKSKKAY 272 >UniRef50_C1XRD4 Transcriptional regulator n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XRD4_9DEIN Length = 264 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 71/265 (26%), Positives = 120/265 (45%), Gaps = 6/265 (2%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 + + +++A Y+L D + + ++A+ AG S++SVV+F + LG++GF KLAL+ Sbjct: 1 MTPALERIAQYVLHNADQVIYQTVIEVADAAGSSEASVVRFCRDLGFQGFQDFKLALASD 60 Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR 133 L + P + + + + T + + + L E V + AR Sbjct: 61 LVTSPVILPKQ-----EKPTSAQSTADYVYNTARQVLDETRRLMNVDLLEEVVERILKAR 115 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRR 193 RI G+G +G AQ+FA KL ++G A A D H+ + P DL IS +G Sbjct: 116 RIDFYGVGNAGTTAQDFAQKLQRLGCAAIAYPDPHSAAVSAATLGPKDLAFGISVSGSSI 175 Query: 194 ELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTD 253 + A ++ G +A+T + + + A L T A E S+ A +Q ML D Sbjct: 176 DTVKALEQAKLAGAYTVAVTRGARSPITRFADAVLLTSAPESPLTRGSMGAKISQLMLLD 235 Query: 254 LLFIALIQQDLELAPERIRHSEALV 278 LF + + A E + + A V Sbjct: 236 FLFTRTALRHPKGA-ELLSKTAAAV 259 >UniRef50_C4L7F8 Transcriptional regulator, RpiR family n=2 Tax=Gammaproteobacteria RepID=C4L7F8_TOLAT Length = 292 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 138/277 (49%), Gaps = 4/277 (1%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 +IR GL+ +++++A++LL + + S + +A + VS+ +VK ++KLG+ GF Sbjct: 13 AKIRMALPGLSNTERQIAEWLLAKGNVESKTSIKSVAEQLEVSEPLIVKLSKKLGFAGFR 72 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 L+ AL E S + +I D + V K+ + AM +V + Sbjct: 73 ELRQALVEY----LSSLPIDSEQEIEPTDSVESVLNKVFANSIQAMKEARSVADPILIAN 128 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 ++ +A+ +++ G+G S V Q+F KL++IG + A D H +L +D+++ Sbjct: 129 AAQLIFNAKNVVIFGVGGSAAVCQDFEHKLLRIGILSRAYSDFHMMLMVSSQLDENDVIV 188 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 IS +G REL A + + +V+ IT +AL Q A + +++ A+ + A Sbjct: 189 VISQSGDTRELLKAVENAKQRHSRVICITNNDTSALAQLADYAIFSPAKGGILLGQNAVA 248 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 Q L D+LFIA++ QD + E++ +V+ L Sbjct: 249 RIVQLNLLDVLFIAILLQDHDKNREKLTRGSRVVRHL 285 >UniRef50_Q9WYG1 Uncharacterized HTH-type transcriptional regulator TM_0326 n=7 Tax=Thermotogaceae RepID=Y326_THEMA Length = 280 Score = 193 bits (491), Expect = 5e-48, Method: Composition-based stats. Identities = 81/282 (28%), Positives = 142/282 (50%), Gaps = 5/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGV-SQSSVVKFAQKLG 59 M+ + RI+++Y ++KK+AD +L P S L+ +AGV S++SVVKF +KLG Sbjct: 1 MDVIQRIKEKYDEFTNAEKKIADTILSDPKGIIESSISDLSEKAGVKSEASVVKFYKKLG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 F K+ L+++++ P ++ + +D + + EK+ K A+ TLN Sbjct: 61 LNSFQQFKVLLAQSISRAP---LEIVYEDVSSEDDTKTITEKIFKATVRAILDTLNWLDI 117 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + + V + ++A+RII G AS VA + K +IG N D H + A + +SP Sbjct: 118 DSIERTVDLFKNAQRIIFIGFAASAAVAFDAFHKFTRIGKNCLFSNDEHIIAAILATASP 177 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DLL+AIS+TG + A + + V+ ITG + L + + L T +E + Sbjct: 178 SDLLVAISHTGETISVVNFAKKAKEMKMPVVTITGNRKSTLAKYSDVVLATNTKETKIRT 237 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++++ Q ++ D ++ L +D A E + S V +L Sbjct: 238 DAMTSRIVQLVILDTIYTLLAARDP-RAIENLNKSRLAVSEL 278 >UniRef50_D0GPL3 Transcriptional regulator, RpiR family n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GPL3_9FUSO Length = 285 Score = 192 bits (489), Expect = 8e-48, Method: Composition-based stats. Identities = 61/279 (21%), Positives = 123/279 (44%), Gaps = 4/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N I+ Y L++ +K +ADY+L + + +L+ LA GV S++ F +KLG+K Sbjct: 5 NMKFTIKTIYNDLSKKEKLIADYILKNINKSTNLTIADLAENIGVVNSTIFSFTKKLGFK 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF + +L + + +H +I +D + + EK+ N ++ T + ++ Sbjct: 65 GFREFRDSLLRDQFNSN----INVHEKISKNDSITSIIEKVFNSNIKSLEDTKKIAEKKS 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + +L + G+G S ++A + K ++ D H L + +D Sbjct: 121 FSTALKILTQVDIVHFFGVGGSSVIAHDAYHKFLRSPLKCRFDSDFHLQLMQASLLTKND 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 IS++G+ +E AD K++ +T + + L ++A + AEE S + Sbjct: 181 CAFIISHSGMTKESIEIADIAKERKAKIIVLTSYPLSILAKKADITFISTAEEIEYRSEA 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +S+ AQ + D +FI ++ + + + K Sbjct: 241 LSSRIAQLSILDTIFILVMLNNPTKTQISLNKIRTTIAK 279 >UniRef50_B9K581 Transcriptional repressor of rpiB expression; transcriptional repressor of ribose catabolism (RpiR/YebK family) n=3 Tax=Proteobacteria RepID=B9K581_AGRVS Length = 291 Score = 192 bits (489), Expect = 9e-48, Method: Composition-based stats. Identities = 69/273 (25%), Positives = 129/273 (47%), Gaps = 4/273 (1%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 RIR L + K+ D + D + S +Q+A AGVS++ VVK +KLG+ GF Sbjct: 14 RIRMMMPMLTPLEAKVVDTVFGMRDFSEETSLKQIAENAGVSEAMVVKITKKLGFSGFRD 73 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 + ++S+ P+ +H ++ DD + +K+ + + A+ TL + + Sbjct: 74 FRSSVSQY----NRQPTTEMHQELSVDDTSLEIVQKVFRTSIHALEETLAILDMAAFDQA 129 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 M+ AR G+G S +A++ A K ++IG A+ D H +L + + D+ + Sbjct: 130 ADMIHKARNRDFYGVGGSAQIARDVAHKFLRIGVRASVFDDSHMMLMSAALLADTDVAIG 189 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 S++G + A + G +A+T + +AL Q A L + A+ + +A Sbjct: 190 FSHSGNTIAVIEALQLARKNGASTIAVTNYGSSALAQSADVVLCSTAQGSPLMGENAAAR 249 Query: 246 HAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 AQ + D +F+A+ Q+D + A + + + V Sbjct: 250 IAQLNILDAIFVAVAQRDYQAAERNLDRTMSAV 282 >UniRef50_B1QW74 Transcriptional regulator n=2 Tax=Clostridium butyricum RepID=B1QW74_CLOBU Length = 281 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 77/281 (27%), Positives = 143/281 (50%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L I+Q Y + +S+KK+ADY+L+ S+ +LAN S SSVV+F++KLG+ Sbjct: 1 MNCSLLIKQIYDKMTESEKKIADYVLVNSSEVYKFSASELANITKTSSSSVVRFSRKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GF K+ L++ ++ I +D +R V K +N ++ T+++ E Sbjct: 61 EGFQEFKIELAKDDI---NPVENIEYDYIDTEDNIREVIVKTANKNIQSINDTISLLDEH 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + E + +++A+ I + GIG S L+ + +KL++I NA + H L+ S D Sbjct: 118 TIEEAIKAIKNAKNIYIFGIGESALIGLDLQYKLLRIHKNAMISLESHVQLSMSANISND 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ + ISY G +E+ A + G K + IT F N + + E+ Sbjct: 178 DIAIGISYLGKTKEVYSALSKCKEKGAKCITITKFGENPVSSLGDIKIQVPFVEKDLRIG 237 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +IS+ Q + D+LF+ L +++ + ++ + ++++L Sbjct: 238 AISSRIVQLTVIDILFVGLAKENFSDVEKYLKETRNMIEEL 278 >UniRef50_B7RYI4 Transcriptional regulator, RpiR family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RYI4_9GAMM Length = 278 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 72/280 (25%), Positives = 122/280 (43%), Gaps = 5/280 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L + ++S K+A ++ P+ ++ LA +AGVS+ +V +F LGY Sbjct: 1 MTLLTDLADPLSKRSKSAHKIAACVVANPEAILASTTASLAAQAGVSEPTVNRFCTGLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGFP KL+L+ LA + + I DD V K+ + A++ T + Sbjct: 61 KGFPDFKLSLAAELARKQPRMTR----DIDPDDSAAKVAAKIFESTQASLSNTQDHLDLA 116 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V + +AR I L G+GAS VA + KL++ A D+ D Sbjct: 117 ALQDVVAAMSNARSIALCGLGASASVALDAQHKLLRFPIPIMAHTDIINQRVVAAGLGAD 176 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DLL+ ISYTG + A+ + G +V IT + L L + E Sbjct: 177 DLLICISYTGRTTAMIELAELAVSRGCQVAGIT-SPHSPLANTCPLVLGVESGEDTDRYT 235 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +++ AQ ++ D+L L + E + ++ + + + Sbjct: 236 PMTSRIAQLVIIDILATCLALEQGEAFADHLQEVKRNLSQ 275 >UniRef50_A0JVW9 Transcriptional regulator, RpiR family n=2 Tax=Actinomycetales RepID=A0JVW9_ARTS2 Length = 309 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 61/282 (21%), Positives = 123/282 (43%), Gaps = 8/282 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RI R L S +++A+ +L P+ A+ ++ +LA AGV +S+V +F ++LG G Sbjct: 10 LLHRISGRLPYLPPSLRQVAEAVLKSPEQAQTMTISELAVAAGVGESTVSRFVKELGIDG 69 Query: 63 FPALKLALSEALASQP------ESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNV 116 + ++ L L+EA + S ++ + D + K+ + + ++ T Sbjct: 70 YKSMLLGLAEATFISKAATSARTADSEVVYEGVNRGDTAAEIAGKVERSSVQSLRRTGQR 129 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA 176 E + V ++ ++ +I + +G+S + A+ + + G RD + Sbjct: 130 QDVEAIQRAVDLIDASNTVIFSCMGSSSIAAEEAVMRFTRAGKKCMLYRDTTIQVMLAAI 189 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA--EE 234 P DLL+ IS +G + A + G +AITG + L+ A LYT Sbjct: 190 IEPGDLLIGISDSGRSTPIIDAMHLARQRGAATIAITGAEGSPLRNYADVVLYTATVPSG 249 Query: 235 QATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 S+++ Q ++ D+L+ + + E ++ + Sbjct: 250 GELYGESVTSKWGQLLVIDILYATYASRHYDATVEHLKQTYQ 291 >UniRef50_C3RM33 Sugar isomerase n=2 Tax=Bacteria RepID=C3RM33_9MOLU Length = 312 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 57/282 (20%), Positives = 128/282 (45%), Gaps = 3/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L ++ + S+K +A Y+L ++S+ QLA S +++ + QKL Y Sbjct: 1 MSLLRKLEMAVD-FSTSEKLIATYILKNGPDVLNMSTSQLAKATYTSPATITRLCQKLEY 59 Query: 61 KGFPALKLAL-SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 KG+ K+AL ++ + + + + D + + + ++ T+N Sbjct: 60 KGYNDFKIALSAQLQYTFDRNSETNPNFPFKKRDTIHTIKHSIATLAKDSINLTVNNIDN 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L + + ML A+ I + G+ +A +F +K+ +IG N ++ L S+ Sbjct: 120 DILAKIIIMLDQAKVIDIYGVSGPLRIASDFQYKMFRIGKNVQIAPMVNEQLFQAAQSNK 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN- 238 D + ISY+G E+ AA+ + R ++AIT F + L + + L+ + E+ + Sbjct: 180 DHCAILISYSGETNEVIAAAELLKRRKVPMIAITSFGESRLSKLCDYVLFLDSRERIYSK 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ + + ++ D+++ L + + E ++ ++ Sbjct: 240 VSTFGSTISIHIMLDIIYSCLFARHYDENLELKLETDHIIDH 281 >UniRef50_Q2G836 Transcriptional regulator, RpiR family n=4 Tax=Proteobacteria RepID=Q2G836_NOVAD Length = 296 Score = 192 bits (487), Expect = 1e-47, Method: Composition-based stats. Identities = 73/278 (26%), Positives = 135/278 (48%), Gaps = 4/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L RIR ++++ K+A Y++ P +S LA S+ SV+ F + +G Sbjct: 19 NALTRIRSALPQMSKTAAKIAAYVVEHPADVVGMSITDLAALVDASEGSVINFCRSIGLG 78 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LKL+L++ + P IH + +D V K+ A+ +L+V + Sbjct: 79 GFQHLKLSLAQEIV----QPVHFIHEDLEREDSTETVCRKVFHSGIQALRDSLSVLDPKA 134 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V ++R+ARR+ + GIG+S +A++ ++L++IG +A V D H + D Sbjct: 135 MAAAVDIIRAARRVEIYGIGSSAPIAEDAHYRLLRIGLDARVVIDSHVQAISASRCDKDV 194 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L IS++G E A G + + IT F + +Q A L+T+A E + + Sbjct: 195 AVLTISHSGSTNETVAATRLAHEAGARTIVITNFGRSPIQAYADVVLFTMARETRFRTEA 254 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +++ AQ + D L AL D + + + ++ + ++ Sbjct: 255 MTSRIAQLCVIDALIAALALADYDRSTDVLKQTFDVLS 292 >UniRef50_C8JWL0 Phosphosugar-binding transcriptional regulator n=3 Tax=Listeria monocytogenes RepID=C8JWL0_LISMO Length = 273 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 65/282 (23%), Positives = 125/282 (44%), Gaps = 10/282 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L I + L++S++K+A +L PD +LS LA A V +S++V+F++K+G Sbjct: 1 MDLLATISSYFPSLSKSEQKVAQLILSNPDEVENLSINDLALMANVGESTIVRFSRKIGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+AL + SQ + D + + ++ + T + +E Sbjct: 61 TGFQDLKIALVKYQTSQKQ----------NITDESNEAKDLVYRQFVDGLQDTKSFIEQE 110 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 KL + M+ A + + +G S +A + +L ++G V D H V Sbjct: 111 KLEQAAKMIHRAEHVYILSVGTSAFIAMQLSNRLKRLGKFVEFVPDGHLQSIYVTMVKKT 170 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ IS +G +E+ + + G V+ ++ F + + Q L ++E +++ Sbjct: 171 DIVIGISKSGNTKEVIQNIELASQSGAPVVTLSNFINSKISQMGDVSLVASSKEFLSDAG 230 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 S SA +Q L D L L+ + + + K + Sbjct: 231 SFSAEVSQLYLLDTLIKVLVDINPSSYHNIRSLTNKALVKRI 272 >UniRef50_B7GUA9 Transcriptional regulator, RpiR family n=7 Tax=Bifidobacterium RepID=B7GUA9_BIFLI Length = 289 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 60/280 (21%), Positives = 109/280 (38%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RI Y L +++ +A Y+ + A L+ Q+A+ A VSQ +V++FA+KLG+ G Sbjct: 7 IRERIDHVYPSLRPAERAVAQYIRDHIEEAADLTVGQMADIAHVSQPTVIRFARKLGFGG 66 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + L+ L A + + + D + K A + + + Sbjct: 67 YRELRYVLRHPAAEHKVTFNPLDGFDLNPWDGEDEIPSKAADGAKALIDELHSALDPKAY 126 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V +L + I + G+ S A + KL +G D + + + Sbjct: 127 RKAVALLAESEFIDIFGVENSLTPAMDLFTKLGYLGLTCRLNTDAYLQQIGAGHLTHGAV 186 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 +A S++G + A G K +AIT L A L T + +I Sbjct: 187 AVAFSHSGSSADTVKALRLAKSHGAKTIAITNAIGAPLASWADVTLLTGRDSHTIYGNAI 246 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 +C A L D+L++ +I D + S +++ V Sbjct: 247 FSCVADTALVDMLYMGVILSDYGRFSTALDESGRMIRDRV 286 >UniRef50_A9MIE1 HTH-type transcriptional regulator murR n=48 Tax=Enterobacteriaceae RepID=MURR_SALAR Length = 287 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 94/281 (33%), Positives = 156/281 (55%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L ++R ++++K+A +LL + +SS+ +A + +SQSS+VKFAQKLG Sbjct: 1 MLYLAKMRNAEGEFTENEQKIATFLLAHVGELKTVSSRNMAKQLEISQSSIVKFAQKLGA 60 Query: 61 KGFPALKLALSEAL---ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 GF L++AL E + +V +H+ I +D L ++ KL +E A+ T N+ Sbjct: 61 NGFTELRMALIEEHSVSREKKRDKAVHLHSSITSEDSLEMMARKLNREKIVALEETYNLM 120 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 E+L + + ++ A I +TG+G S LV ++ ++KLMKIGF A D H QA Sbjct: 121 DYERLEQVINLISKAPLIQITGVGGSALVGRDLSFKLMKIGFRVACEVDTHVQATIAQAL 180 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 D+ +AISY+G ++E+ L A+ + G V+AIT + L++ A + L T++ E Sbjct: 181 RQGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLADSPLRRLADYTLDTVSGETEW 240 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 S+S+S AQ +TDLLF+ ++Q + + I S L+ Sbjct: 241 RSSSMSTRTAQNSVTDLLFVGMVQLNDVESLRMIERSSELI 281 >UniRef50_UPI000196C511 hypothetical protein CATMIT_02677 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196C511 Length = 286 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 67/279 (24%), Positives = 138/279 (49%), Gaps = 5/279 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN +RI++ ++K +A+Y+L S+Q L + S +++++F++K+G+ Sbjct: 9 MNAYIRIKEYNDSYTATEKLIAEYILEN--DILQDSAQALGEKTNTSAAAIIRFSKKIGF 66 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGF LK+ L+++ + + + +D + + EK + N + T + + + Sbjct: 67 KGFSDLKMNLAQSTKEEKQQ---EVDLIFEPEDNISTLVEKGCRLNMNTVLKTYQLINID 123 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L E + +L +A I L G+G S ++ + KLM+IG D+H + Q+ + Sbjct: 124 TLEESIDLLNNASTIYLFGVGGSSVIGLDIYQKLMRIGKKVIYNADLHVQMTFAQSMDQN 183 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D L ISY+G L A + V++IT N + + +++ L +EE+A Sbjct: 184 DAALIISYSGSTTGLVDVARVLHEKQIPVISITQINANPISKLSTYSLKVPSEEKALRIG 243 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++S+ + ++TDLL+ + +++ E + + S+ V Sbjct: 244 AVSSRISSFVITDLLYYGVFKKNFEEHKKNLIDSKDNVS 282 >UniRef50_C3JIB3 RpiR-family transcriptional regulator n=2 Tax=Rhodococcus erythropolis RepID=C3JIB3_RHOER Length = 291 Score = 191 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 78/277 (28%), Positives = 135/277 (48%), Gaps = 2/277 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L RIR L+ ++ ++A+ + P A L+ LA A S ++VV+ A++LG++ Sbjct: 12 DLLARIRASLSSLSPAELRIAEIIEADPSLASTLTVNDLAERASTSTATVVRTAKRLGFE 71 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L+LAL+ ++ ++P+ I D V KL + + + T + Sbjct: 72 GYPQLRLALAA-ISGSGTENTIPLGVDIVAADSAGEVMAKLAEFESEQLKGTAQLTDPAA 130 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L E V+ +RSARR+ + GIGASG+VAQ+ KL +I N D A + + PDD Sbjct: 131 LEEVVSRIRSARRVEVYGIGASGIVAQDLTLKLSRIDVNCRVHLDRDAAMVSASLLGPDD 190 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS++G ++ R G AITG + L ++ H L T E SA+ Sbjct: 191 IAVGISHSGETSDVVEPLALARRTGASTAAITGGARSTLAVQSHHVLLTAGREFGFRSAA 250 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +++ Q ++ D +F + A ++ S + Sbjct: 251 MASRTGQLLVVDTIFAMVAHSLP-SALSALQRSHDAI 286 >UniRef50_A1JQZ2 RpiR family regulatory protein n=12 Tax=Enterobacteriaceae RepID=A1JQZ2_YERE8 Length = 286 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 103/284 (36%), Positives = 167/284 (58%), Gaps = 3/284 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L I LA++ KK+A +L P++ +SS Q A +AGVSQS++VKF+QK+G Sbjct: 1 MSILNEITWLLPELAENQKKIAKCILDNPESILSISSSQFAEDAGVSQSAIVKFSQKIGM 60 Query: 61 KGFPALKLALSEALASQP---ESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 KGFPALK+A+SE L+ P +HN I +D L ++ +KL E TA++ T Sbjct: 61 KGFPALKIAISEELSRNNLFKSYPHKALHNSISPEDSLMVMAQKLAHEKTASIMETTRKI 120 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 + + V+++ +A+R+ + GI +GL A++ ++KL KIG D+H +A Sbjct: 121 NFSVFQQVVSLINAAQRVQIVGIWGAGLTAKDLSYKLQKIGIMTLVEADLHVQIAAALTL 180 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 +P D+ + +S+TG R+++ +AA G V+AITG + L + A + L +I++E Sbjct: 181 TPKDVQIVLSFTGRRKDMKIAATVAKAQGATVIAITGSKVSPLAKIADYVLESISDENEW 240 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+SIS+ AQ LTDL+F+AL+QQ E+A I ++ + L Sbjct: 241 RSSSISSRTAQNTLTDLIFLALMQQRKEMAKPLILNASMTINNL 284 >UniRef50_Q2SNY6 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SNY6_HAHCH Length = 285 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 63/280 (22%), Positives = 133/280 (47%), Gaps = 5/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +RQ L +S++K+A+ +L P+ H+ LA EAGVS+ ++V+F + + + Sbjct: 6 DILSWLRQNRDTLRKSEQKVAECVLRNPNDVIHMRIVDLATEAGVSEPTIVRFCRTICFD 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F + K++L++ Q S + R D L+ +G K+ + +++ N + ++ Sbjct: 66 SFQSFKVSLAQ----QLASMQRQTPFRARSGDSLQQLGAKIFSDVQSSLQQVFNQLAWDR 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + + ++ R+ G GAS VA + K ++ + A D + +D Sbjct: 122 IEQACAWISNSPRLYFFGYGASAAVAADAQQKFFRLKPSTHACPDPDTQMLIAGLVETND 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++AIS++G L + + G KV+AI+ +AL A+ + +E A Sbjct: 182 VIIAISHSGRTNNLIQSCMQARASGAKVVAIS-PPQSALANIANLNIGVSVDENADAFTP 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +++ A M+ D + L Q+ E +++ ++ + L Sbjct: 241 LASRLAHLMILDTIASNLFQKLDEQHVQKLNQAKKNLSSL 280 >UniRef50_A6T0F7 Transcriptional regulator, RpiR family n=2 Tax=Oxalobacteraceae RepID=A6T0F7_JANMA Length = 286 Score = 190 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 116/279 (41%), Gaps = 5/279 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L IR +Y L++S+KK+A +L QP+ A + LA +A VS+ +VV+F + +G+ G Sbjct: 2 LLDSIRTQYDSLSKSEKKVALAVLEQPELAIAENITALAKKAEVSEPTVVRFCRAIGFDG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + A KL L++ +D + +K+ + + N + Sbjct: 62 WQAFKLKLAQ----GLALAPGTGDESPMLEDMAADLVDKVCNRSINTLLDLRNSLDANAI 117 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + +L A I G G SG++A + K + G A D H D+ Sbjct: 118 EQALQVLGRANTIEFYGQGTSGIIAADAQHKFFRSGVPTVAYSDPHIHSIAASLLKKGDV 177 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++AIS G L + G ++ + + L + A+ + I Sbjct: 178 VVAISQRGSSLSLLRSVQLARSSGAAIVVL-APSGTPLAELATVLIPIDLHFHTDPYTPI 236 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 SA A ++ D+L + L + +++ +++ ++K Sbjct: 237 SARLAHLVVIDILAVGLALRLSPERRKKMLNAQKALQKF 275 >UniRef50_Q7MD38 Transcriptional regulator n=31 Tax=Gammaproteobacteria RepID=Q7MD38_VIBVY Length = 278 Score = 190 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 58/277 (20%), Positives = 119/277 (42%), Gaps = 10/277 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L+R+R + ++ + +ADY+L + + LA S+++VV+ + +GYK Sbjct: 6 NLLVRLRSNMEPFSKKLRVVADYILENAHDVQFQTITDLARNTQTSEATVVRLCRDMGYK 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ ++AL+ L+ I + + + ++ T + + Sbjct: 66 GYSDFRMALAVDLSQTESRQQNHIEG---------DICDVSAQSAVDSLQDTAKLIDRKS 116 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V + A I G+GAS +V + A++L++IG A D H + SS D Sbjct: 117 LARIVERVHQAEFIGCIGVGASSIVGRYLAYRLIRIGKKAIMFEDTHLAAMSASRSSQGD 176 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L A+S +G +E+ AA + V+++T + L ++ L E + Sbjct: 177 LWFAVSSSGSTKEVIHAAGLAYKRDIPVVSLTNINHSPLSSLSTEMLVAARPEGPLTGGA 236 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++ +L D+L +L++ + ++ + +V Sbjct: 237 FASKVGALLLVDVLVNSLLES-YPEYKDSVQETAEVV 272 >UniRef50_A0AJB4 Complete genome n=7 Tax=Bacillales RepID=A0AJB4_LISW6 Length = 283 Score = 190 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 72/281 (25%), Positives = 124/281 (44%), Gaps = 5/281 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + RI L S+KK+ +L P+ S +LA +A S ++VV+F + +G + Sbjct: 5 SIINRIEGILHDLPTSEKKIGQTVLANPEFTTTASIHKLAQKADASGAAVVRFCKSIGLQ 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 FP LK LS P + I ++ + +KL+ M T + E K Sbjct: 65 SFPELKRQLSLD----LAQPQKIGYYDIEPNEDFHTITDKLVSNMMQTMNDTASQLDETK 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + +L A I G+GAS LVA++ + K ++ G + A +D H L Sbjct: 121 VLTACDLLGDADTIYTYGVGASWLVAEDISQKWLRAGKHVLATQDAHVLAMAFATGKRKS 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSA 240 + +AIS +G E+ D+ V+++T F N L+++A L T A E S Sbjct: 181 VFIAISNSGETSEVLQLVDQAKLNDVTVISLTRFGNNKLKEKADLALETSRAPEAEIRST 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + S+ AQ ++ D+LF + ++I+ S + Sbjct: 241 ATSSRQAQLLVVDILFYYYASHHYDEMIQQIKQSREATNRF 281 >UniRef50_Q040R4 Transcriptional regulator n=8 Tax=Lactobacillus RepID=Q040R4_LACGA Length = 283 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 74/281 (26%), Positives = 137/281 (48%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ ++ Y + KK+ADYLL P T +Q L S +S+++F Q+LG+ Sbjct: 1 MDLSTKVLNNYPNFKGASKKIADYLLAHPKTFLQEDAQGLGKMTKTSAASMIRFCQQLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG ++ L++ P+ I + D +V +KL+ T ++ Sbjct: 61 KGLKDFQIQLAQD---TPQDNEETIDPIVDHHDNPHIVLQKLLSSIEKNTEQTAHLIDGL 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L++ + L++A RI L G+GAS L AQ+ +K ++ N +D+H L + S Sbjct: 118 ALNQAINFLKNADRIYLAGVGASSLPAQDLYYKFIRSDKNVVFNQDIHIALERICYSHST 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D L+ SY+G+ +E+ L AD+ + ++ +T + L + A L +E+ Sbjct: 178 DALVIFSYSGLTQEILLMADQARKNHTPIIVVTRSRQSPLVELADVVLGVSTDEKLLRVG 237 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +I++ ++ ++ +LF+A I Q+L ER R +E + +L Sbjct: 238 AINSLFSEMFVSSVLFLATINQELPRLEERFRETELITNQL 278 >UniRef50_Q38YX9 Gluconate operon transcriptional regulator, RpiR family n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Q38YX9_LACSS Length = 280 Score = 190 bits (483), Expect = 4e-47, Method: Composition-based stats. Identities = 70/278 (25%), Positives = 136/278 (48%), Gaps = 5/278 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +R Y ++ K++ADY+ + + L+ Q+ A GVS +++ +FA+ LG+ Sbjct: 5 IDSLLRSYYDNFSEKYKQIADYIFQESQFNQRLTIQEFAANCGVSTATISRFAKILGFDN 64 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F A K+AL E+ + P+ ++I +D + EK+ N+ A+ AT ++ +EE+L Sbjct: 65 FQAFKMALLA-----KEANTSPLFHEINANDTFTTMAEKIFSSNSNALKATWSLLTEEQL 119 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V ++ A + L G+GASG+VAQ+ K ++ +D H L + D Sbjct: 120 QKAVALINRAHLLSLFGLGASGIVAQDGYHKFLRTSIPTVFNQDYHLQLMQATKLTNQDC 179 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + IS++G ++ A + ++ IT F ++L + L +I+EE + ++ Sbjct: 180 AIIISHSGQNKDALELARILKERQVPLIVITSFGNSSLAKLGDITLLSISEETNYRAEAL 239 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A AQ L D LF+ + + + + + A + + Sbjct: 240 HALIAQISLIDSLFMMVAVNNGQETEQSFKEIRAEIDR 277 >UniRef50_C1PED1 Transcriptional regulator, RpiR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PED1_BACCO Length = 289 Score = 190 bits (482), Expect = 5e-47, Method: Composition-based stats. Identities = 68/279 (24%), Positives = 131/279 (46%), Gaps = 4/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N +L+I+ + L++S+KKL +Y+L + ++ +LA +AGVS ++VV+F + +G Sbjct: 6 NIILQIKSKLTSLSKSEKKLGEYILSHAVETVNDNTSELAKKAGVSPATVVRFCRSIGLS 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ L + I+ I ++ + ++ +KL ++ T N+ Sbjct: 66 GFSQLKIRLYADASGGL---DREIYTDITPNEDITMIADKLALRFNQSITQTANLLETSC 122 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + M+ + I + GIGAS + A++F K +IG D H L +++ +S D Sbjct: 123 IEKITAMVDKSPAIYVYGIGASHVAAEDFTHKFSRIGKPVVHTLDHHLLGSSLINASKDC 182 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE-QATNSA 240 + +AIS +G E + G + IT + L L E SA Sbjct: 183 MFVAISNSGETNEAIKLTQIAKQNGLFTVGITQKRDSTLASIVDAPLIHHGGEAVLLRSA 242 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + ++ AQ D+L+ A + + R+++S+ ++ Sbjct: 243 ATTSLAAQLFTIDVLYFAYVAKHYHEIMGRLKNSKINIQ 281 >UniRef50_B5HLI6 RpiR-family transcriptional regulator n=3 Tax=Streptomyces RepID=B5HLI6_9ACTO Length = 317 Score = 190 bits (482), Expect = 6e-47, Method: Composition-based stats. Identities = 81/279 (29%), Positives = 129/279 (46%), Gaps = 1/279 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 ++R + +S ++A+ + P L+ LA G S+++VV+ A+ LGY G Sbjct: 35 LAAKVRTLGPSMTRSMHRVAEAVAADPAGCAALTVTGLAERTGTSEATVVRTARLLGYPG 94 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + L+LAL+ A Q + I I DDP+ V KL + + T +L Sbjct: 95 YRDLRLALAGLAAQQQSGRAPAITTDIAVDDPIADVVAKLAYDEQQTLADTAAGLDTAQL 154 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V SARRI + G+GASGLVAQ+ KL++IG A A D H + D+ Sbjct: 155 GAAVAATASARRIDVYGVGASGLVAQDLTQKLLRIGLIAQAHSDPHLAVTNAVQLRSGDV 214 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA-EEQATNSAS 241 +AI+++G ++ G +AITG A+ Q A H L T E A+ Sbjct: 215 AIAITHSGATGDVIEPLRVAFEHGATTVAITGRPDGAVTQYADHVLTTSTARESELRPAA 274 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +S+ +Q ++ D LF+ + Q+ E A + S + Sbjct: 275 MSSRTSQLLVVDCLFVGVAQRTYETAAPALAASYEALAH 313 >UniRef50_B9CM70 Transcriptional regulator, RpiR family n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CM70_9ACTN Length = 283 Score = 189 bits (481), Expect = 7e-47, Method: Composition-based stats. Identities = 71/277 (25%), Positives = 129/277 (46%), Gaps = 4/277 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +R+R L+ +++LA++LL P A ++ Q+A G++ S+V KF QKLG++G Sbjct: 6 IRVRVRALESSLSDKERQLAEFLLADPHKASKMTISQIAQTLGMADSTVFKFTQKLGFEG 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F + L+ P V IH I + + E + + + ++ T + SE+ + Sbjct: 66 FRDFRGELAAEGF----DPEVSIHEHITHKSTPKQMAETVFESSIRSLTDTKELFSEQDI 121 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 ++ ++ G+G S +VA + K ++ A D H L S+ DD Sbjct: 122 IHAAKLIEDCYQLTFYGMGGSSVVAADAYHKFLRTPKRVAYDADFHLQLMRASRSNGDDC 181 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L +S++G + A+++ VG + IT + L A CL TIAEE A S S+ Sbjct: 182 ALLVSHSGRCIQTIQIAEKLREVGASTIVITSNPSSPLTALADACLVTIAEETAYRSESL 241 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ +Q L D L+ ++ D A ++ ++ Sbjct: 242 ASRISQLALVDALYTIVMFSDENAASRSLKEVREVIS 278 >UniRef50_C2C2H3 Bifunctional RpiR family transcriptional regulator/sugar isomerase n=1 Tax=Listeria grayi DSM 20601 RepID=C2C2H3_LISGR Length = 282 Score = 189 bits (481), Expect = 8e-47, Method: Composition-based stats. Identities = 77/281 (27%), Positives = 126/281 (44%), Gaps = 6/281 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L RI ++ L +S+KK+A+ +L P A S LA A S +++V+F + LG K Sbjct: 5 SILNRIETLFKDLPKSEKKVAEMVLQDPAFASASSIHSLAKRADTSAAAIVRFCKSLGLK 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 FP K L S+ SP + D+ + +KL+ + T SE K Sbjct: 65 SFPDFKRQL----YSELSSPVASGYYDFEEDESFDGISQKLLANYFQTLNDTAGQISEAK 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + L A I G+GAS LVAQ+ A K ++ G +D H L A+ Sbjct: 121 IRTVSEQLEKADTIYTYGVGASWLVAQDIAQKWLRAGKQVVISQDEHVLAM-AFAARKSG 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSA 240 + A+S +G + A++ + V+ +T F P+ L+ +A L T A E S Sbjct: 180 VFFAVSNSGETTSVIELAEQAKQNNLTVIGLTRFGPSKLKAKADFLLETSRAPEAKFRST 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + S+ AQ + D+L+ + + + E+IR S + Sbjct: 240 ATSSKQAQFFIIDVLYYHYVSRHYDQMIEQIRESRQATDRF 280 >UniRef50_D2PUN7 Transcriptional regulator, RpiR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PUN7_9ACTO Length = 294 Score = 189 bits (481), Expect = 8e-47, Method: Composition-based stats. Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 1/261 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RIR L +++++A+ +L P + QLA + S ++V +F + LG G Sbjct: 4 IETRIRGLVPTLTPAEQRVAEQVLADPLGTHRGTIGQLAERSRTSLTTVTRFCRALGMAG 63 Query: 63 FPALKLALS-EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + L+ AL+ EA + ++ I DDP++ V L+ + A+ T + Sbjct: 64 YQELRFALATEAGEASSRDWTLGAAADIGPDDPMQSVLANLVATDVRALQETASQLDLAV 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V + +ARR+ L + S V + +L ++G D+H LA+ P+D Sbjct: 124 AEQLVDAITTARRVDLYAVSGSAAVTNDLQRRLHQLGITCHLWIDVHDALASATLLGPED 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS++G E+ G A+T F +A+ A L T A E S S Sbjct: 184 VAIGISHSGETIEVIEPLTAARDAGAVTAAVTNFPRSAITSVAGLLLTTSAREATYRSGS 243 Query: 242 ISACHAQGMLTDLLFIALIQQ 262 +S H Q ++ D L + Q+ Sbjct: 244 LSGRHTQLLVIDCLVTGVAQR 264 >UniRef50_Q03HR4 Transcriptional regulator, RpiR family n=2 Tax=Pediococcus RepID=Q03HR4_PEDPA Length = 270 Score = 189 bits (480), Expect = 9e-47, Method: Composition-based stats. Identities = 67/278 (24%), Positives = 134/278 (48%), Gaps = 14/278 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + + Q+Y L++ ++K+A ++ P + ++ L+ +A VS ++V +F +K+GY Sbjct: 1 MNIIDVVEQKYPSLSRQERKIALKVVQHPADVKKMNINTLSKKAEVSTATVTRFVKKMGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F KL L+E + I + + +++ + T +++ Sbjct: 61 PDFSQFKLGLAE------------ATSNITENVDNAPLPDQVTDFYNQMITGTWKRINQK 108 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L++ ++++A R+ + G+G+SG AQ + +LM++G NA A D H + + D Sbjct: 109 TLNQVAMLIKNAPRVFIFGLGSSGYNAQELSQRLMRMGINAFAPSDSHTMYISSSIMQKD 168 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DLL+ +S +G E+N A + KV++IT F + L + + + L E N+ Sbjct: 169 DLLIVLSVSGKSNEVNEAVAVAKQHQLKVVSITAFDDSPLAEMSDYQLSVQYSEFVDNTQ 228 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 I++ + D+L L+Q E R + + A + Sbjct: 229 FINSQLGVVYIIDILSTMLLQN--ETYKARYQQTVAAI 264 >UniRef50_A9NEV7 Transcriptional regulator, RpiR family n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NEV7_ACHLI Length = 281 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 65/281 (23%), Positives = 133/281 (47%), Gaps = 2/281 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ +L + + + L+ +++ + DYL+ + S +++A A S +SVV+ +KLGY Sbjct: 1 MSVMLNMLKNKEALSMAERIVLDYLIENKTLLKDFSVEKIAEAAYTSPASVVRMCKKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF K+ A + + + I D +K I+ N A+ T+N+ E+ Sbjct: 61 NGFKDFKIDFILANSKVEIPETSEYTDVILIKDQNNG--KKAIENNIRALEETINLYDEK 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + +++ +AR+I++ G G+S LV ++ KL +I A + H + Sbjct: 119 TYTKAASLIMNARKILIFGKGSSFLVCKDLEMKLRRINKFCVAQGESHDQFVDASFINNK 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ IS +G +E+ +A +++IT + L + LYT A E SA Sbjct: 179 DVVIFISNSGKTKEIISSALLAKENKTPIISITRIGSSILADISDVVLYTSALESEFRSA 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++++ +Q + D L+ D++ + + + + +KK Sbjct: 239 AMTSRISQMSVVDALYAKCAYTDIDRSIQALETTYRTIKKF 279 >UniRef50_A1BB20 Transcriptional regulator, RpiR family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1BB20_PARDP Length = 280 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 69/267 (25%), Positives = 114/267 (42%), Gaps = 3/267 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RIRQ +++++A+ +L P TA S A A VS+ S+++F ++L G Sbjct: 15 MLDRIRQSLASFTPAERRVAEAVLDTPSTAITWSISDAARIAKVSEPSIIRFCRRLDCDG 74 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 FP +L L++ LA +P DDPL + + + + A+ L Sbjct: 75 FPDFRLKLAQQLAKHQPAPQPLARPGSGNDDPLAAMVDDIFQRAGQAIEEARRDLDLGAL 134 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V ML ARR+ + G G+SG +A +L + A A D + + P DL Sbjct: 135 RAAVAMLGKARRVDIYGYGSSGFMASEAQHRLAALAIPAVAYSDPTLQMHSAPLLGPGDL 194 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA-EEQATNSAS 241 L +S++G+ L + + G VLAI+ + + A L A + + A Sbjct: 195 LFVLSFSGLTSYLISNIEIARKAGAPVLAIS-PKGSIVASLADVNLNLNAYRQSSGRMAV 253 Query: 242 ISACHAQGM-LTDLLFIALIQQDLELA 267 + A L D LF A+ ++ Sbjct: 254 PTGRVAPMYVLLDALFAAMAEEMGGEH 280 >UniRef50_Q6AH41 Transcriptional regulator, RpiR family n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6AH41_LEIXX Length = 289 Score = 189 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 75/280 (26%), Positives = 132/280 (47%), Gaps = 2/280 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +RQ L+ ++ ++A ++ P L+ +LA SQ+S+ +F Q L Y Sbjct: 3 DVLSAVRQAVPRLSATEARIAQTVIEHPQRVVDLTIAELAAVCDASQASIARFCQALRYS 62 Query: 62 GFPALKLALSEALASQPESPSVPI--HNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ +LA++ A + + + ++I D L+ V K+ + T A+ T Sbjct: 63 GYREFRLAVAAATSREQATRERFELTESEIDPSDSLQEVVAKIAYQETLAIERTARELDA 122 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E L V + +A R+ L GIG+S L AQ+ KL +IG A D H L++ P Sbjct: 123 EALDAVVAAIIAASRVDLYGIGSSILTAQDLQQKLSRIGLTAFCSVDSHLALSSAALQKP 182 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 ++ +A S++G RE N A G +AIT +++ + L T A E S Sbjct: 183 GNVAIAFSHSGETRETNHALAVARAAGATTVAITNVPESSIAAVSDLLLMTQARENFYRS 242 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++++ AQ L D LF+ + Q+ + + +R + V+ Sbjct: 243 GAMASRTAQLALVDFLFVRVAQRLYDQMTDSLRLTYEAVR 282 >UniRef50_C6JFM8 Transcriptional regulator n=2 Tax=Clostridiales RepID=C6JFM8_9FIRM Length = 285 Score = 189 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 71/282 (25%), Positives = 124/282 (43%), Gaps = 1/282 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L I ++Y L +S KKLADY+ ++LS LA VS++++ +F + LG Sbjct: 4 SILDSITEQYHSLTKSGKKLADYVFSHTTETQYLSITSLAENCKVSEATITRFCRGLGLS 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ A KLAL++A + S + +D + + K+ N ++ + + EE+ Sbjct: 64 GYNAFKLALAQADRTTDLGDSSNSAEPVSSEDSISTICAKVHAANLLSLNESYALYDEEE 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + +++L S+RRI G G S ++A + N + D H + + + D Sbjct: 124 MSKAISILSSSRRIYCFGQGGSMIMAMEAWARFSTASPNFVHICDSHMQASAIAMADSKD 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L SY+G R++ V+ IT F +A + AS L E S S Sbjct: 184 AILFFSYSGSTRDMCDTLQIASSRHVPVILITHFPKSAGAEFASVVLQCGYNESPLQSGS 243 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV-KKLV 282 ++A Q L D LF Q + + + KL+ Sbjct: 244 VAAKVGQLFLIDCLFYGYCSQKPDTCSAARSATAHAIANKLL 285 >UniRef50_A4EAC5 Putative uncharacterized protein n=2 Tax=Collinsella RepID=A4EAC5_9ACTN Length = 283 Score = 189 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 73/260 (28%), Positives = 119/260 (45%), Gaps = 2/260 (0%) Query: 15 AQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEAL 74 + +++ + Y+ P LS + LA+ S SS+++F ++LG+ G+ + L L Sbjct: 17 SPAERNVIAYVSAHPHEVVGLSVRGLADVTFSSPSSILRFCKRLGFAGYKEFQRELIAEL 76 Query: 75 ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARR 134 A + V + I DD + + K++K N + AT L C L+ AR Sbjct: 77 ALLGDKKDVALE-DISMDDSVERIVGKVMKSNVRTIEATARTLDYTVLERCAARLKRARA 135 Query: 135 IILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRE 194 + L GIGAS LVA + A KLM++ D H L + D+ +A SY+G+ +E Sbjct: 136 VNLFGIGASRLVAHDLAQKLMRVDKECRLYDDWHDQLLCAKNMHEGDMAIAFSYSGLTQE 195 Query: 195 LNLAADEMLRVGGKVLAITGFTP-NALQQRASHCLYTIAEEQATNSASISACHAQGMLTD 253 + E R V+A+T + L A L A E S ++++ AQ M+ D Sbjct: 196 VLDCTAEAQRHNCPVVAVTKVDGSSKLATMADAVLGVAASEPLVRSGAMASRMAQLMVVD 255 Query: 254 LLFIALIQQDLELAPERIRH 273 L+ A + D E A I+ Sbjct: 256 ALYAAYVASDYERATHVIKQ 275 >UniRef50_B6G0W9 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G0W9_9CLOT Length = 310 Score = 189 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 58/278 (20%), Positives = 130/278 (46%), Gaps = 1/278 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RI +Y L++S+KK+AD++ A L+ +++A EAGVS+ S+++F++ +G G Sbjct: 31 LLFRIATKYMALSKSEKKVADFIKNFNGKAEKLTMKKVAKEAGVSEPSIMRFSKSIGLDG 90 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK L + + I +D + ++ K++ + + L S + Sbjct: 91 FNELKYCLMKTKKDDEGTMKPLHGFDINREDTIDMIPGKIVMTVENQINSMLESISLKSY 150 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + + +A+ + + + S A + A KL+ +G N D + + + +D+ Sbjct: 151 SDMINCIINAKNVDIYSVENSVSSANDLATKLLYLGINVKMYTDSYLQKISAYNLTSEDV 210 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + ISY+G ++ + G + IT + + + + A + T +++ A I Sbjct: 211 AIGISYSGNSKDTVEMIKTAKKRGATTVVITNYKDSKIVKYADILICTSSDQMLYGDA-I 269 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + Q ++ D++++ +I D + E + +E ++ Sbjct: 270 FSRAIQLVINDMIYMGIIHSDYDKYIEILNKNEKAIRN 307 >UniRef50_Q03YQ8 Transcriptional regulator n=4 Tax=Leuconostocaceae RepID=Q03YQ8_LEUMM Length = 284 Score = 189 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 67/279 (24%), Positives = 132/279 (47%), Gaps = 2/279 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + ++R + + +++KL D+++ AR + Q+++ +GVS +++ +F +K+G + Sbjct: 4 NIIAQLRAQRKQYNTTEQKLIDFIINHVSEAREANIQEMSELSGVSTATISRFVKKIGLE 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F ++L+ A S + I D V +K+ A+ AT++ + + Sbjct: 64 SFREFSVSLASAATQMAASVDLFGE--IADTDDTIAVAQKVFGGAENALAATVSNLTATQ 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L E L SARR+ GIG S +VA N K ++ + A D L + +D Sbjct: 122 LDEATLALISARRVGFFGIGGSSIVAFNAYHKFLRTPIDVIAHPDYDVQLMQAVKLNSND 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + IS++G ++ L A ++ K++A+T F + L + A L ++AEE S S Sbjct: 182 TAVVISHSGRNKDTLLIAKKLHEQHVKIIAVTSFKDSPLAKLADLVLLSLAEEVNFRSES 241 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +S+ AQ + D LF + + + ++++ Sbjct: 242 MSSLIAQLTIIDTLFTLVGSHLSQDTQSVVDTMRDVIEE 280 >UniRef50_Q03Q61 Transcriptional regulator n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03Q61_LACBA Length = 286 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 123/279 (44%), Gaps = 1/279 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + +IR Y L++++KK+A L P ++ ++LA+ GVS +++ +F +++ Y Sbjct: 4 STIGKIRGTYDQLSRTEKKVAQMALNTPAVVSEMTIKELASATGVSTATISRFVKRMDYA 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + +AL+ LA + ++ D L + K +++ AT SE+ Sbjct: 64 NYREFTMALAH-LAIEDGGEHQSSFPELAEGDSLATIANKTFHYTISSLEATNEALSEKD 122 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V L +A ++ G+G S + A + K ++ + D L S D Sbjct: 123 LARAVLKLINAEKVTFFGLGGSSIAALDGYHKFLRTALSVTYYPDFDIQLMQAARLSDQD 182 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + IS++G E +E+ R ++AIT ++ + L Q A ++ +E S Sbjct: 183 CAVVISHSGRNSETLQVVEELQRNDVSIIAITSYSGSPLAQAADVTFLSLTDEVNYRSEG 242 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + +Q + D LF+ + + + ++++ Sbjct: 243 MYSLISQLAILDTLFMMTVLRVSSRTGNVMTKVHDVIEQ 281 >UniRef50_C2HLD1 Transcriptional regulator n=3 Tax=Lactobacillus RepID=C2HLD1_LACAC Length = 284 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 63/277 (22%), Positives = 134/277 (48%), Gaps = 5/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N I+ + L + ++ L DY++ P+ S Q+L+ + G+S +++V+F +++G Sbjct: 3 NIFSIIKGKKSQLPKKEQLLGDYIIANPENVISSSIQKLSKDTGISTATIVRFCREIGTN 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LKL L A S + +++ + + + + +A+ AT + ++ Sbjct: 63 GFSDLKLQLVAA----QSSVNNNDYHEFDAGEGIAAIKNTMAARFESAIEATQSGLNDNS 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V + ++ I++ G GASG+VA + K M++G N + D+H LA + + + DD Sbjct: 119 VEKAVRKIYNSSSILVYGAGASGIVASDMYQKFMRVGKNINYISDLHVALAQLASFTSDD 178 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSA 240 LL+ IS G E++ + G L +T + + ++A L T E + S Sbjct: 179 LLILISNDGKTTEVSDIQKVADKFGIPTLLLTANPRSFVAKKADLVLLTQDIGEPSIRSG 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + ++ +Q + D+L + + + ++++ S Sbjct: 239 ATTSLISQMFVVDVLVFSYVSVHSDEVLKKLKRSNEA 275 >UniRef50_C0CU66 Putative uncharacterized protein n=2 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CU66_9CLOT Length = 285 Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 65/279 (23%), Positives = 116/279 (41%), Gaps = 1/279 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L+ IR Y L + +KK+ADY+L P ++ +L+N GV ++V +F + + Sbjct: 5 NLLISIRSCYDRLTRLEKKVADYVLQHPQEVVKMTINELSNSCGVGDTTVFRFCRSMNVG 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ KLAL+ + S + L + +++ T A+ TL+ + Sbjct: 65 GYQDFKLALALSSNVNDMLDSKG-EFNLAQSHDLHELAQQVSGVFTDAVNETLSSLDYDA 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V + +AR + L G G SG+ A ++M+I N D+H L + D Sbjct: 124 ISRTVEAILNARSVHLFGFGNSGVSALMMQNRMMRILPNIFYTSDVHMQLTSAATMQEDS 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + +G+ ++ A G + IT F A L + A E S Sbjct: 184 VAIIFCNSGITKDSIRIAQMTHEAGAFTVFITKFMQTPAAPYADVLLCSGATEGPIQGGS 243 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 IS +Q + LL+ L ++ A E + + + Sbjct: 244 ISGVASQMYIVMLLYSELFRRMETRAQENKIKAAHAIAE 282 >UniRef50_A5EB66 Transcriptional regulator, RpiR family n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EB66_BRASB Length = 270 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 68/271 (25%), Positives = 126/271 (46%), Gaps = 4/271 (1%) Query: 10 RYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLA 69 L +++A+ + QP+ H S ++A VS+ ++V F +++G +GF LK+ Sbjct: 1 MLPELPPKARQIAELIAAQPEPFVHKSITEVAEACDVSEGTIVSFCRRVGVRGFQELKIM 60 Query: 70 LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTML 129 L+ P I + D V + + + A++ T + S E L E +L Sbjct: 61 LARD----LIEPVRLIQEDLHRGDDPATVTDHIFAAHAASLQETRRLLSMEALAEATRLL 116 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYT 189 R A+RI + GIG+S +AQ+ +++L+++G A A+ D H + + P + +S++ Sbjct: 117 REAQRIEIYGIGSSAPIAQDLSYRLLQLGLAANAIVDSHVQAVSAGMTGPGVATVTVSHS 176 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQG 249 G E LA G + + IT + L LYT+A E ++S+ AQ Sbjct: 177 GSTVETVLATRLAQAAGARTIGITRLGKSPLAAHCEVLLYTVANETRYRPEAMSSRVAQL 236 Query: 250 MLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + D L D E + R++H+ ++ + Sbjct: 237 AIIDTLVSCCALTDTERSVGRLQHAARILSE 267 >UniRef50_C8SX74 Transcriptional regulator, RpiR family n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SX74_9RHIZ Length = 314 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 60/275 (21%), Positives = 112/275 (40%), Gaps = 5/275 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + ++ Y L ++++++AD +L A S+ LA AGVS+ +V +F + +G + Sbjct: 27 DIISLVKDSYSELRRAERRVADVVLDDVKYAVDASNAALAQRAGVSEPTVTRFCRAIGCE 86 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G KL L+++L + G + E A+ + Sbjct: 87 GLRDFKLKLAQSLVVGALY---LAKSPAPGSGNGMPFWNAVFGEARRALQEAERQLDPVE 143 Query: 122 LHECVTMLRSARRIILTGIGASGLV-AQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + ++ AR++ + G+G S AQ ++L + G A D + + T P Sbjct: 144 LQKAAELIAKARQVTVFGLGGSSSALAQETQYRLFRYGITVNAQCDPYLMRMTASTLKPG 203 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++AIS TG RE+ A + + +T L + L E Sbjct: 204 DLVIAISATGRTREVIEAVELAKHYRANAIGVTA-PDTELARACDVRLAVAVPEYPDTLK 262 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 ++ +A + DLL +A + A E +R + Sbjct: 263 PTASRYAFLAMIDLLAVASAYKLDASARETVRRIK 297 >UniRef50_C1IBM1 Phosphosugar-binding transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IBM1_9CLOT Length = 266 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 57/280 (20%), Positives = 128/280 (45%), Gaps = 14/280 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L ++++Y + +K +ADY++ D ++++ LA E G S +++ +FA+K+G Sbjct: 1 MDILCEVQRKYNEFSDKEKDIADYIMQHGDKIKNINITDLAKEIGTSGATITRFAKKIGC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F +K+ L + + + + + T + +E Sbjct: 61 DSFVDMKIKL-------------GSNKVELPINDEDGIFSYTYQYYNEVIERTKMLIDKE 107 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ + V ++ A+ I + G+G+SGL + +L+++GFN + D H ++ S + Sbjct: 108 EIFKVVNEIKKAKNIYIYGVGSSGLTCKEMMQRLLRMGFNVHCISDSHMMIINSSIVSEN 167 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++ IS +G +E+ + + G K+++ITGF + + + + S Sbjct: 168 DLVIGISISGETQEVIHSLRKSKENGAKIVSITGFEGSTVSKYSDIKFIVYNPNFVDRSR 227 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 I+ + L D L ++ +D+ L+ + A++ Sbjct: 228 FINTQFSAMYLLD-LISMVLLKDINLSNKMQTTINAIINN 266 >UniRef50_C0R285 Transcriptional regulator n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0R285_BRAHW Length = 285 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 75/281 (26%), Positives = 141/281 (50%), Gaps = 2/281 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L IR +Y+ +++ KK+++Y+L P L++ ++ GVS +SVV+FA+ LG+ Sbjct: 1 MNAYLIIRDKYEDFSKAYKKISNYILSNPKEVIKLTALDISKNCGVSSASVVRFAKDLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG LK++++ + + I+ I DD + + K++ ++ +E Sbjct: 61 KGLDELKISIAS--KNGDDDNKYNINTIISADDNVEELCNKIMLLIKSSNEDFFYQLDKE 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + ++R+AR I + GIGAS L A + KL + FNA D H + + Sbjct: 119 ALEKAFKLIRNARNIYMLGIGASSLSAYDLFHKLKRANFNAFFYEDAHLNAEFFNYLTEE 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++A SY+G E+ ++A+T N L + A + E+ T Sbjct: 179 DVVIAFSYSGRTNEVIYPVKIASSKKASIIAVTRKKTNNLSKMADVLITVPNNEELTRMG 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +I++ ++ +++DLL+ IQ+D E E + ++ L ++L Sbjct: 239 AITSKYSSLIVSDLLYFGAIQKDFENIKENLINTSILTREL 279 >UniRef50_A0Z4E2 Transcriptional regulator n=3 Tax=Bacteria RepID=A0Z4E2_9GAMM Length = 291 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 68/277 (24%), Positives = 117/277 (42%), Gaps = 5/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L +I+ GL++SD K+A +L P+ A H S LA +A VS+ SV +F ++LG Sbjct: 6 NVLTQIQAALPGLSKSDTKIAHVVLADPEAATHASIALLAQQANVSEPSVNRFCKRLGAT 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P K+ L+ +L + I + +D + KL+ A+ + Sbjct: 66 GYPDFKIWLARSLVAG----VRYISQVVDPEDTVTTYPGKLVDNTVNALLLAREQLPLKT 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V L +A RI G+G S VAQ+ K + D L S D Sbjct: 122 LEVAVEHLDAAGRIYFFGMGTSAAVAQDAEHKFFRFQTPVTTHTDPLMLRMLAAGGSQGD 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS+TG + AA G V+++T + L Q + + A E + Sbjct: 182 VFVFISHTGRTEAIVDAAALASASGATVISLTA-QDSPLAQVSHCVIGLEAPENTEDYLP 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +++ ++ D+L + + E E + + + Sbjct: 241 MTSRIVHLVIIDILVTGVTLKRGEPCIEHLARIKESL 277 >UniRef50_C7REF2 Transcriptional regulator, RpiR family n=2 Tax=Anaerococcus RepID=C7REF2_ANAPD Length = 279 Score = 187 bits (474), Expect = 4e-46, Method: Composition-based stats. Identities = 81/281 (28%), Positives = 150/281 (53%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M ++I++R + SD K+A Y+L +P ++SQ+LA+ G SQS++++F QK+GY Sbjct: 1 MTYTIKIKERSEDFTPSDTKIAKYILDKPGEVIKINSQKLADLTGTSQSAIIRFVQKIGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG+ +LKL ++++L I DD + + EK +++ T + E+ Sbjct: 61 KGYTSLKLDIAKSL---ENDEINLKSEVISADDKVGDIIEKSKINVISSIEKTYALIDED 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ + + + A + L GIG+SGLV ++F +KL + G A D H L+ + D Sbjct: 118 QISKAIDNIVYANFVYLAGIGSSGLVCEDFLYKLQRSGKKAFYETDAHTNLSLLTNIKED 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DLL+ I+YT + +E+ +AA+ +G K+++IT L + + E+ Sbjct: 178 DLLICITYTALSKEVLIAAEYAKTIGAKLISITKAGRGKLANMSDILIPIPEIEKKMRYG 237 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +IS+ A ++TD+LF I ++++ + + S+ L KL Sbjct: 238 AISSRFASQIITDILFYGYISKNMDEVVKNLMVSKELTDKL 278 >UniRef50_A8UBX8 Phosphosugar-binding transcriptional regulator, RpiR family protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8UBX8_9LACT Length = 285 Score = 187 bits (474), Expect = 4e-46, Method: Composition-based stats. Identities = 77/280 (27%), Positives = 133/280 (47%), Gaps = 5/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LL IR++ L QS+KK+A+ +L P +S+ LA EAG S ++V++F + +G K Sbjct: 4 NVLLTIREKKITLPQSEKKIAETILRDPVKVIQMSATDLATEAGSSSAAVIRFCRSIGIK 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LKL LS + ++ I D+ L V +K++ T NV ++ Sbjct: 64 GFTELKLQLSAD----SQGIKDNLYTDILADENLEQVKKKMLINTNHLFKETNNVLDTKQ 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + +L + I L G+GAS +VA + K ++G D H L+ ++ + + Sbjct: 120 IERVSELLHESSIIYLYGLGASHIVASDIQQKFSRMGKIVVCSLDQHLLVTSMAVAGENA 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSA 240 + +S +G ++E+ +G K +A+T T NAL A L T A E S Sbjct: 180 VFFGVSNSGEKKEVLALMIMAKELGLKTVALTNNTENALSLEADIALKTAFAHEAPLRSG 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + Q D+LF ++ +L + S+A +++ Sbjct: 240 ATISLLTQMYAVDILFYDYASKNYDLTVTNLEKSKAAIQR 279 >UniRef50_C0X1P6 Transcriptional regulator RpiR n=21 Tax=Enterococcus RepID=C0X1P6_ENTFA Length = 285 Score = 187 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 62/283 (21%), Positives = 131/283 (46%), Gaps = 13/283 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + I + Y L +S++K+AD++L ++ + + + +A V +++++F QKLG+ Sbjct: 14 MNYIYLINEHYPLLTKSERKVADFILNSGESIIYSTMNDIKTKANVGDATIIRFCQKLGF 73 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+ +++ S+ + +++ K + +T + +EE Sbjct: 74 SGFSDLKIEIAKEDFSKKKEQP-----------SSGKYHDEVAKSLIEVLQSTSCLINEE 122 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 KL + + ++ A + + G+G+SG + + +++G A AV D H + Sbjct: 123 KLTKAIQLINQASSLYIFGVGSSGNTSLDLESMFLRVGIQAKAVLDPHYQAQVASLLTDR 182 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++ S +G ++ + G K+LAIT + + + + A L T EE N Sbjct: 183 DLVIIFSLSGKTKDTYDSLKIAKNNGAKILAITNYIHSPIGKSADLVLQTAIEEF-LNGG 241 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRH-SEALVKKLV 282 S++ +Q + DLL Q + + + +++ K + Sbjct: 242 SLAGKISQLYICDLLVHEYEQNNKINSLDLREKVLRSIIDKRI 284 >UniRef50_D0KLH9 Transcriptional regulator, RpiR family n=1 Tax=Pectobacterium wasabiae WPP163 RepID=D0KLH9_PECWW Length = 320 Score = 186 bits (473), Expect = 6e-46, Method: Composition-based stats. Identities = 75/277 (27%), Positives = 135/277 (48%), Gaps = 1/277 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 I GL+ +++ +A+Y+L P L ++LA E GVS++++V+F + +GY Sbjct: 35 KVRTYIANILHGLSDTNQTIANYVLQNPSMVAQLPVKKLAVEIGVSEATIVRFCKHIGYA 94 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G LK AL+ S+P+ I +D V +K+ A+ T+++ + Sbjct: 95 GLLELKSALNRE-LFDDSDLSLPVTPDILMNDTRHDVAQKIALTVDRAVKETIDLIDMQT 153 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 +++ V++ SARR++ G GASGL A K+ +IG ++ A D ++ + PDD Sbjct: 154 INQIVSLFISARRVMFIGFGASGLAALEARDKMNRIGIDSDAFTDRFSMTLKLANLKPDD 213 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++A S++G E+ A + G LAIT T + L ++ L T E + S Sbjct: 214 LVVAFSHSGETPEVVNAFKLAEKAGATRLAITHSTHSPLTSLGNYVLLTCGESERYQGDS 273 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 I +Q + + L L +Q+ + + +AL+ Sbjct: 274 IGTRVSQLFMIEFLCTELTKQNFKDFSSQSISIKALL 310 >UniRef50_B5FDJ7 Transcriptional regulator, RpiR family protein n=48 Tax=Gammaproteobacteria RepID=B5FDJ7_VIBFM Length = 283 Score = 186 bits (472), Expect = 7e-46, Method: Composition-based stats. Identities = 107/282 (37%), Positives = 166/282 (58%), Gaps = 2/282 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L +I+ + L+ + K+ D++L P + SSQ LA + GVSQSS+VK Q+LG+ Sbjct: 1 MNILEKIQNQRSNLSSNGIKILDFILDDPASISSYSSQALAAKVGVSQSSIVKLTQRLGF 60 Query: 61 KGFPALKLALSEALASQPE--SPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 KGF A KLA+ E L + P PIHN+I DD + +KL++E T A+ AT N + Sbjct: 61 KGFTAFKLAIIEDLGRKQAILEPERPIHNKINSDDSSLTIAQKLVQEKTHALIATTNAIN 120 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 + T+L A+RI + GIG S L A++ A+KL+KIG A +D H +AT + Sbjct: 121 FSEFELVTTLLNQAQRIQIVGIGGSALTAKDLAFKLLKIGMTALTEQDSHVQIATANTLT 180 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D+ + ISY+G R+E+ +AA + G V+A+T + L++ A+ C+ TIA+E+ Sbjct: 181 KQDVQIVISYSGSRKEILMAAQTAMDKGATVIALTSTKKSPLRKLANFCIDTIADERQFR 240 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 S+SIS+ AQ ++TDLLF+ L+Q + A I + + + Sbjct: 241 SSSISSRTAQNVITDLLFMTLLQIKSDKAKLLIDEISSTMNR 282 >UniRef50_B7RLA4 Transcriptional regulator, RpiR family n=1 Tax=Roseobacter sp. GAI101 RepID=B7RLA4_9RHOB Length = 317 Score = 186 bits (472), Expect = 8e-46, Method: Composition-based stats. Identities = 56/278 (20%), Positives = 109/278 (39%), Gaps = 5/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + +R+ LA ++K+A+Y+ + ++ +LA VS +V++F + LG Sbjct: 30 DVISALRRHDGHLATQEQKVANYVKAHLEDISAMTIAELAGHCDVSTPTVIRFCRTLGCD 89 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF KL L++ LA + S + D +++ A+ E Sbjct: 90 GFREFKLRLAQNLAVSMQYLSADPQPEPADGDTA---INQILGGIYASANVMRRQIDPEV 146 Query: 122 LHECVTMLRSARRIILTGI-GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + L R ++ GI G S V+Q A + ++G + + D + L Sbjct: 147 LDRAKSALLKTRHLLFAGIGGGSSNVSQEAANRFFRLGIPSFSTSDSYILQMRAATLQAG 206 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L IS +G + AA+ G + IT + L + + E Sbjct: 207 DVLFLISASGEADAIVGAAEIAGGYGATTICIT-KSGTRLANVCNIPILIDLPEDRDIHK 265 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++ + ++ D L +++ Q E +R A + Sbjct: 266 PTASRYIHMIIVDALAMSVAQDLAHETTENLRRIRASL 303 >UniRef50_Q0BBX6 Transcriptional regulator, RpiR family n=65 Tax=Proteobacteria RepID=Q0BBX6_BURCM Length = 324 Score = 186 bits (472), Expect = 9e-46, Method: Composition-based stats. Identities = 59/279 (21%), Positives = 118/279 (42%), Gaps = 6/279 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + RI + L ++++K+A Y+L A H S LA +AGVS ++V +FA+ +G + Sbjct: 38 DIVARIAECAPELREAERKVAAYILADLARAAHASIGALARDAGVSVATVTRFAKAVGCR 97 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 LK+ +++A A + P +V +++ + Sbjct: 98 DVRELKVLVAQAAAVGQRFLVPSDAHPAEDASPASVVYDEIRVALAHNHQ----LLRNTS 153 Query: 122 LHECVTMLRSARRIILTGI-GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L A+ + + G G S +A ++L++ G A+ +D S D Sbjct: 154 FDAAADLLAGAKMVYVYGQGGGSTALADELRFRLVRFGRPVASYQDSLLQRMVAATLSRD 213 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +++A+S +G EL + R G ++AIT + L + A H + +A E Sbjct: 214 AVVVALSVSGRVPELLESCRLAKRYGATLIAITA-PASPLAKLADHLIPVVAFETDFIYK 272 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ +A M D+L + + + E +R + + Sbjct: 273 PSTSRYAMMMAIDVLVTGVALRLGDAGRESLRRIKHALD 311 >UniRef50_B1R0U2 Transcriptional regulator, RpiR family n=9 Tax=Firmicutes RepID=B1R0U2_CLOBU Length = 284 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 55/277 (19%), Positives = 122/277 (44%), Gaps = 3/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I Y +++KK+ADY+L ++ +LA AG S ++V +F +K K Sbjct: 6 SIIDTIYAEYNSFFEAEKKIADYILKYGTKLIEMTISELAEAAGTSDATVTRFCRKCNMK 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ L++ L+ + + + + ++ ++ M T+ +EEK Sbjct: 66 GFHHLKITLAKELSESQKEDTRVSGDVSE--ENIKESLNNILFNKIEEMKQTILTINEEK 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 E + +LR+A + +G + VA + +K ++G + A +A +D Sbjct: 124 FKEILQILRNAGIVQFVAVGNTIPVALDGCYKFNQVGVASVANTIWETQIAYTYNLKEND 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++AIS +G + L + G +AIT + L + +++ + T E+ Sbjct: 184 VVIAISNSGASKRLIDVIEIAKEKGAVTIAITNSDKSPLAKLSNYHIKTATREKLFLEEY 243 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + + + ++LF+ + ++ + + E + Sbjct: 244 YFSRISAMTVIEILFLFMTVGKHDVY-KTLSRHEQSI 279 >UniRef50_Q2JBJ8 Transcriptional regulator, RpiR family n=1 Tax=Frankia sp. CcI3 RepID=Q2JBJ8_FRASC Length = 299 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 71/277 (25%), Positives = 117/277 (42%), Gaps = 4/277 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 + +R L S +K+ +L P HL+ LA+ G S ++VV+F Q LG KGF Sbjct: 24 IAHLRACLPTLTPSGRKIGQLILDDPREIVHLTVTDLADRTGTSVATVVRFCQDLGLKGF 83 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 LK+ L+ P +H + D + EK++ +A+ T Sbjct: 84 ADLKIRLAGE----AIPPERGLHEAVTHADSPATILEKILHSTESALSETTRTVDRAAFT 139 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 V L+ A R++L G G S +AQ+ A++ +G A A D H + P Sbjct: 140 RAVDALQCADRVLLIGAGTSAPLAQDAAYRFRTLGLLAEAPADAHVQHVAARLLPPASAC 199 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 LAIS+TG RE A G +A+T F + L + A L + E ++S Sbjct: 200 LAISHTGQTRETLAGAAAARAAGATTIALTSFFRSPLTRLADVALVAGSSETNYRVEAMS 259 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + D LF+A+ + A + + ++ + Sbjct: 260 SRIIHATVLDALFVAVHLAQPDRAQKAQELTAEVLTE 296 >UniRef50_A4WDW6 Transcriptional regulator n=10 Tax=Enterobacteriaceae RepID=A4WDW6_ENT38 Length = 274 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 64/262 (24%), Positives = 120/262 (45%), Gaps = 12/262 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N LLR+RQ G + + +KL ++L P +L+ +LA E+ S++SV + + LG K Sbjct: 6 NLLLRLRQGVSGYSPTQQKLGSFVLNDPSRVLYLTITELARESDTSEASVTRLCRTLGCK 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ K+AL+ + + +++++E+ A+ T + E Sbjct: 66 GYTEFKMALALDVQREHVPLKKGDE------------IDEIVEESILALQDTSRLLDREI 113 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + L +R + + G+ AS ++ +KL+++G A DMH + DD Sbjct: 114 LLKAAQALHQSRSVYIYGVAASAIIGDYLHYKLLRLGKPAQLFSDMHRASMNATTLTSDD 173 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++AIS +G R+L + G VLA++ + L + L E ++ + Sbjct: 174 LVVAISSSGSTRDLLHVVKLARKRGAHVLALSNTPRSPLTSLSDMLLVAAKPEGPLSAGA 233 Query: 242 ISACHAQGMLTDLLFIALIQQD 263 ++A +L +LL +I D Sbjct: 234 LNAKVGVMLLVELLATTMISLD 255 >UniRef50_Q1WQV4 Transcriptional regulator, RpiR family n=4 Tax=Lactobacillus RepID=Q1WQV4_LACS1 Length = 274 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 62/278 (22%), Positives = 130/278 (46%), Gaps = 11/278 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L I + L++ ++K+A +L P + ++ +LA +AGVS +++ +F +++ Sbjct: 1 MNLLNNIEAIFSTLSRQERKVALKVLQNPQEVQSMNITKLAKKAGVSNATITRFVRRMEC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F KL L+ S ++ +G+K+ + + T + Sbjct: 61 SDFHDFKLKLA---------ISAASSPEVPVSSESDSMGDKVYEFYQKVLQGTWKQLDTD 111 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +H V + ARR+ + G+G+SG AQ F +L+++G A D H + + D Sbjct: 112 TIHNIVHAITKARRVYVYGLGSSGYTAQEFTQRLIRMGIAAFCTVDSHMMFIDSTIVNSD 171 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++AIS +G ++N+A + G K+++ITGF + L + ++ N+ Sbjct: 172 DVIIAISQSGNTDDVNVACSLAKQKGTKIISITGFYQSPLIELSTWSAVVKNSNFVDNTR 231 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 I++ A + D++ + L+++ + + L+ Sbjct: 232 FINSQLAIVYVIDIITMELMEK--SEYSSTMNKTVELI 267 >UniRef50_Q2J8J9 Transcriptional regulator, RpiR family n=1 Tax=Frankia sp. CcI3 RepID=Q2J8J9_FRASC Length = 293 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 62/260 (23%), Positives = 114/260 (43%), Gaps = 4/260 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RIR L+ +++++A +L P H S +LA +G S ++VV+F Q LG +G Sbjct: 18 VLERIRALSASLSSAEQRVARQVLADPVAMIHQSVSELAQVSGSSPATVVRFCQSLGLRG 77 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + LKLAL + +++ D + K++ +A+ L Sbjct: 78 YQELKLALIRETL----PVERQLVDEVSAADGPDEIAGKVLGGAASALTEAARGIDGGVL 133 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 ++ +A R + +G S +A + A++L +G +A D H T + + DL Sbjct: 134 AAIADLVVAAPRTLFVAVGTSAPLAMDAAYRLTTVGVDARFAGDAHVQHVTARMLAAGDL 193 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 +A+S+TG E A + G AIT F + L + H + + E A ++ Sbjct: 194 CVAVSHTGSTAETLAAMRAAVDAGAHTAAITSFARSPLTELVRHAVVVGSRETAYRIEAM 253 Query: 243 SACHAQGMLTDLLFIALIQQ 262 ++ + D LF ++ + Sbjct: 254 TSRIVHLSVLDALFALVVVR 273 >UniRef50_A6LRG7 Transcriptional regulator, RpiR family n=2 Tax=Firmicutes RepID=A6LRG7_CLOB8 Length = 291 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 130/279 (46%), Gaps = 5/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +I Y+ L +++KK+ADY++ + ++ +LA E+ VS++++V+F +K K Sbjct: 15 SVLDKILCIYKSLHEAEKKIADYIINNKERVIEMTVSELALESSVSEATIVRFCKKCDLK 74 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ +++ + + S + + + ++ + T+++ +E Sbjct: 75 GFYDLKIKIAKEMVNLKSSNIS----NELDSNNIMQSLQNILANKIEELKQTISMMNEGN 130 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + ++ AR + +G + VA + A+K ++G ++ LA + +D Sbjct: 131 IKRILEAIKGARIVQFAAVGNTIPVAMDGAYKFNQLGISSVTNTIWETQLAFSYTLTKED 190 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++ IS +G +EL + ++IT + + ++ + + T E+ Sbjct: 191 VVIVISNSGASKELVALLEIANERQATTISITNHENSPVANKSKYHINTSTREKLFLDEF 250 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + ++ ++L++ L+ +D E A I E + + Sbjct: 251 SFSRVSAMVVIEILYL-LLTRDKEDAYNWISQHEQSIAE 288 >UniRef50_A9MLD6 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- RepID=A9MLD6_SALAR Length = 293 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 71/262 (27%), Positives = 121/262 (46%), Gaps = 1/262 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + + L ++D K+A Y+L QP ++LA E GVS++++V+F +K+GY Sbjct: 7 NVRVYLANILGSLGETDAKIAGYILQQPGLVVQFPVKKLAQEIGVSEATIVRFCKKVGYG 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G LK L L ++ + S+P I DD V +K+ + T+ + + Sbjct: 67 GLLNLKADLKRELLAENDL-SLPSSPDIFLDDSRNDVAQKIALTIETSARETIGLLDMKI 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V SARR++ G GASGL A K+ ++G ++ A D + + DD Sbjct: 126 VKPVVERFLSARRVMFVGFGASGLAALEARDKMNRLGIDSDAFTDRFTMTLKLANLKRDD 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++A S++G E+ A + G LAIT + L + A+ T E S Sbjct: 186 LVVAFSHSGETPEVVNAFRLAQKKGAYTLAITHSPHSPLNELANTFWLTSGEAGPMQGDS 245 Query: 242 ISACHAQGMLTDLLFIALIQQD 263 IS +Q + + L + + + Sbjct: 246 ISTRISQLFIIEFLCTEITRHN 267 >UniRef50_B9YAK0 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAK0_9FIRM Length = 364 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 56/281 (19%), Positives = 129/281 (45%), Gaps = 2/281 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L +++ + +K + +Y++ P+ ++ + LA E S+S++ +F +K GY Sbjct: 81 MSFFLELQKNHSS-TPVEKSIINYIINHPNEVIEMTMEDLARETYTSRSTISRFCKKNGY 139 Query: 61 KGFPALKLALSEA-LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 +GF +LK+ L+ + S D + + + ++T ++ T+ N Sbjct: 140 EGFNSLKMQLAIELNLFLKDEMSSSTSLLFEKGDNASSIIDNITSQDTYSIIETVRTNPV 199 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E + + + + R ++ G+ SG++A + + ++G +L + P Sbjct: 200 EHIEKLADKILNCRHVVFLGVQFSGIIAYDAHLRFSRLGIPCKYFNTECDILTYSYFADP 259 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+++ SY+G + AAD + G + ++T N L + + LY + + N+ Sbjct: 260 QDVVIIFSYSGKTAVILEAADHIRGKGTFLASVTKNYNNELLEISDLHLYINSIDDPENN 319 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 S+S+ A L D+++ L+ + + +++ + L KK Sbjct: 320 LSLSSRIAALCLVDMIYAVLVNKKSDNFYDKLMQTNKLYKK 360 >UniRef50_B5GNW3 RpiR-family transcriptional regulator n=14 Tax=Streptomyces RepID=B5GNW3_STRCL Length = 354 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 78/277 (28%), Positives = 126/277 (45%), Gaps = 1/277 (0%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 ++R + +S +++A+ + P L+ LA G S+++VV+ A+ LGY G+ Sbjct: 70 SKVRTLVPSMTRSMQRVAEAVADDPAGCAALTVTGLAERTGTSEATVVRTARLLGYPGYR 129 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 L+LAL+ A Q S + I DDPL V KL ++ + T L Sbjct: 130 DLRLALAGLAAHQQSGRSPSVTADISVDDPLPDVVAKLARDEQQTLADTAATLDTAALAA 189 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 V+ +ARRI + G+GAS LV + A KL++IG A A D H + D+ + Sbjct: 190 AVSAAATARRIDIYGVGASSLVGLDLAQKLLRIGLIAHAHTDPHLAVTNAVQLRTGDVAV 249 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA-EEQATNSASIS 243 AI+++G ++ G +AITG + Q A H L T E A++S Sbjct: 250 AITHSGSTGDVIEPLRAAFERGATTIAITGRADGPVTQYADHVLTTSTSRESELRPAAMS 309 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + Q ++ D LFI + Q+ A + S + Sbjct: 310 SRTGQLLVVDCLFIGVAQRTYASAAPALAASYEALAH 346 >UniRef50_C9L6X6 Transcriptional regulator, RpiR family n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L6X6_RUMHA Length = 297 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 73/277 (26%), Positives = 134/277 (48%), Gaps = 6/277 (2%) Query: 1 MNGLLRIRQRYQGLA--QSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 M R+ + G ++++K+A YLL D + H + +LA+E GVS +S+V+F + + Sbjct: 17 MGCRERLIDKRDGEHTKKTERKIAAYLLGNFDKSLHSTLLELADEIGVSDASIVRFCKSI 76 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 GY GF K+ A Q + + DD + +K+ ++A+ T Sbjct: 77 GYTGFQEYKI----NAALQSVPEPRLYNPSLSVDDNPAEICDKIFAIESSALEQTKQELD 132 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 +++ +L ARRI L G G S + A++F KL+KIG A D L + + Sbjct: 133 ISVMNKVADVLLKARRINLVGTGGSAISARDFQHKLLKIGVRAELQEDKDLQLMSASLLT 192 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 +D+L AIS++G + + + K++ +T + N L ++A + LY ++E+ Sbjct: 193 EEDVLFAISHSGSNLHVAETIELAQKRNAKIITLTMKSKNILVEKADYPLYVVSEKTIFE 252 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 S S SA AQ + D L + ++ + + E ++ + Sbjct: 253 SESFSARLAQLAMLDCLVALMAFKNFDGSLEAMKATR 289 >UniRef50_A8SDH7 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SDH7_9FIRM Length = 281 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 66/277 (23%), Positives = 123/277 (44%), Gaps = 4/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N ++Q L +S + +A+YL+ A++LS LA E V++++V +F + LG++ Sbjct: 4 NFWELLQQHQGDLTKSGRTVAEYLVQHAAEAQYLSISSLARECQVAEATVFRFCRALGFE 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ +++AL++A A+ + + D + E A+ T N S + Sbjct: 64 GYHEMRIALAQANATG----VLVNQQEPAPDADTATLCEHASALFMTAINGTQNALSPQA 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V +L SAR++ G G S A+ + I AV D H + + D Sbjct: 120 VDQAVALLHSARQVFCMGQGGSMAAAKEICARFACITNKFRAVADSHMQVMAASLMTEQD 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++L +SY+G R+L G K++ IT + + + A L A+E +S S Sbjct: 180 VVLFVSYSGATRDLMETLRTAKANGAKIILITHYEDSPGAKLADIVLLCGAQESPLDSGS 239 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 I A + ++L + I D + E + + Sbjct: 240 IPIKVAVLYVAEVLVLRYILDDKPGSTEAQERTTEAL 276 >UniRef50_B9NXN7 Bifunctional protein glk n=2 Tax=Rhodobacteraceae RepID=B9NXN7_9RHOB Length = 320 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 115/278 (41%), Gaps = 5/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + + LA ++K+ADY+ + ++ LA VS+ +VV+F + LG + Sbjct: 33 DLIPALHNSQTKLAVQEQKVADYVKDHLNEISSMTIGNLAERCSVSKPTVVRFCRSLGCE 92 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF KL L++ +A + ++ ++++ A + E+ Sbjct: 93 GFRDFKLRLAQNVAVSAQYLYRNAGDE---SSDANSAIDQVLGALFATLDVMRGQIDTER 149 Query: 122 LHECVTMLRSARRIILTGI-GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L E R+I+ GI G S LVAQ + + ++G + V D + L A + Sbjct: 150 LEEARDACLDRRQILFAGIGGGSSLVAQEASNRFFRLGIPSFFVNDSYVLQMRAAALGLE 209 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L +S +G + AA+ G ++IT L + L T E + Sbjct: 210 DVLFLVSASGEADAIVSAAEVANGYGATTISIT-KPNTRLSDISKIALLTELPEDSDIYK 268 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++ +A + D L + + Q+ + E +R A + Sbjct: 269 PTASRYAHLAIVDALAMTVAQEMTDETKENLRRIRASL 306 >UniRef50_C2D9G3 RpiR family transcriptional regulator n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9G3_9ACTN Length = 285 Score = 184 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 58/280 (20%), Positives = 129/280 (46%), Gaps = 5/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + +I+ A+ ++ +A ++L +++ +LA++ GV+ S++ KFAQK+GYK Sbjct: 5 SVTAKIKSLLPSCAEKEQAIAQFILQHVRETSYMTIHELADKLGVADSTIFKFAQKMGYK 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF + L P V +H I D L + + + +++ TL + +E+ Sbjct: 65 GFRDFRNDLLTEAY----DPEVSVHEHITTRDSLATIAATIFHSSVTSLHNTLALLNEDN 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L ++++ +A + G G S +VA + K ++ + D H + D Sbjct: 121 LKRALSLINNAHTLTFFGCGGSNIVAADAYHKFLRSPLHCQNAIDEHIQIMQASLLGAQD 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS++G+ R A+ + ++ IT + + + A + +EE S S Sbjct: 181 VAIIISHSGLSRTTLQIAEILRENRVPIIFITSYLNTPITRFADVVFISASEETGYRSES 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAP-ERIRHSEALVKK 280 +++ AQ ++ D LF A++ + + + + + + + + Sbjct: 241 LASRVAQLVILDTLFCAVMFKSDDKNVAQTLHNIRSAINR 280 >UniRef50_Q03CT7 Transcriptional regulator n=7 Tax=Lactobacillus RepID=Q03CT7_LACC3 Length = 289 Score = 184 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 69/280 (24%), Positives = 130/280 (46%), Gaps = 5/280 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + L++++KK+ DY++ +S LA AG S +SV + A++L + Sbjct: 1 MSVKGNYQSTRSELSETEKKIVDYVMAHSQAVLTMSVHDLAKAAGTSPASVSRAARRLQF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ LK+ L+ L +I+ + L + +KL+ + ++ T++ +E Sbjct: 61 SGYNELKMQLAADLKGDTNQSD---DQEIQKNATLTTIKQKLLIDANQSLRETVDQINEA 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS-P 179 + + ++ + R+++ G+GAS L AQN A K ++G+ D++ L + Sbjct: 118 NVDTIINLIHQSDRLLVFGVGASYLAAQNIAQKWGRLGYPCHFSDDLNLFLPLAATADVE 177 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE-EQATN 238 L IS +G E+ LAA + G +V+ T N+L + A + T E Sbjct: 178 QTLCWFISNSGESPEVVLAAKLAKKAGLQVIVTTKLGKNSLTKYADVSIQTSQPMEARNR 237 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 A+ + H Q ML D+L+ A + + + A S+A V Sbjct: 238 FAATQSLHTQFMLIDILYYAYVSRYYDAAKIATDQSKAAV 277 >UniRef50_A8RZI5 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RZI5_9CLOT Length = 294 Score = 183 bits (465), Expect = 6e-45, Method: Composition-based stats. Identities = 60/288 (20%), Positives = 126/288 (43%), Gaps = 9/288 (3%) Query: 1 MNGLLR-------IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVK 53 MN IR + Q + K +A+Y+L + + LA E+ VS+++V + Sbjct: 5 MNFEQVTPTIVLDIRSKMQDFNPAQKAVANYILNNFYDMEGMPIRDLAVESEVSEATVSR 64 Query: 54 FAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYAT 113 F + +GY+ + A +L ++++ A + S+ + ++ +D + K+ + N A+ T Sbjct: 65 FVKAMGYENYRAFQLEVTKSKA-ERRKGSLKGYAEVTEEDNAPGICRKIFESNIQALQDT 123 Query: 114 LNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLAT 173 L V + L ++ ARR+ + G S + A + +L ++G D H Sbjct: 124 LTVIDYDALERAADLIARARRLCIFAQGRSKVTANSIRLRLHRLGIEGTLYTDPHEQAIA 183 Query: 174 VQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL-YTIA 232 P+D+ + IS G R + ++ G ++ +T + L++ A L Sbjct: 184 SSLMGPEDVAVGISTFGRSRSILVSIRRAAARGSSIIGVTSYQNTPLEKEADILLRTVNN 243 Query: 233 EEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +E S A Q ++ D L++ + ++ A ER + + +++ Sbjct: 244 DEADFGSEPSCASVTQMVMLDCLYMLVAKRMEGKAEERFKITRDAIQQ 291 >UniRef50_B0NYS8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0NYS8_9CLOT Length = 282 Score = 183 bits (464), Expect = 6e-45, Method: Composition-based stats. Identities = 65/278 (23%), Positives = 117/278 (42%), Gaps = 5/278 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +I Y L ++KK+ADYL+ P A +S +LA+ SQ+++++F +K+G KG Sbjct: 7 VRDQIFSTYDSLYDAEKKVADYLISHPSEAIEMSVSELASHCDASQATIIRFCKKIGCKG 66 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK+ L+ Q E D + ++ + AT + + E+L Sbjct: 67 FHQLKIKLAGEQRQQEEQVIS----NEIDIDQMDKSLNNIMISKVEEIKATFHNFNPEEL 122 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 E V ++ A I +G + +A + ++K ++G A + + A + D+ Sbjct: 123 REIVDLIIHANLIEFAAMGDTIPIALDGSYKFNQLGLKAVSSTIWESQEAFSRTLRKGDV 182 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 AIS +G + L + + G +AIT + + L + H L T E + Sbjct: 183 FFAISASGASKRLVKMVEIVKDNGVTTIAITNQSKSPLAELCDHVLLTATREHIFHDQVS 242 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A + D LF+ L + E + E V + Sbjct: 243 FTRMAAMSVIDTLFLLLFSTKWDSF-ENVAQHEQSVAE 279 >UniRef50_UPI00017F2FF2 transcriptional regulator n=1 Tax=Escherichia coli O157:H7 str. EC4024 RepID=UPI00017F2FF2 Length = 285 Score = 183 bits (464), Expect = 7e-45, Method: Composition-based stats. Identities = 65/276 (23%), Positives = 121/276 (43%), Gaps = 1/276 (0%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 I R L Q++ ++ ++ +S +LA+ V ++S+++F +KLGYKG Sbjct: 9 TLINTRINELTQTEIRIYQFIKNNRMRFIDMSIAKLADAMNVGEASIIRFCKKLGYKGLS 68 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 LK L ++ + + + + + ++L N A+ TL + E+ L Sbjct: 69 ELKTTLRLE-TDTDDTLLSKVTSLDEQTNSMTGIAQQLANNNYFAINETLALQEEQALVR 127 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 L +A ++ GIG S + ++ M+I N A+ D H + D+++ Sbjct: 128 AADYLSNAGQVYFYGIGMSAISVLYAKYRFMRIMANVDALIDNHTMTLNSNNVGKKDVVV 187 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 AIS++G R++ A + G + I+ ++L Q A L T S S + Sbjct: 188 AISHSGETRDVVDALKRVKEKGAVTIVISKLQHSSLSQYADVVLLTGGTSNPYQSDSSTI 247 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 AQ + D+LF AL+ + E+I S ++ K Sbjct: 248 TAAQSFMVDVLFNALLFINRGGNVEKIISSLDIINK 283 >UniRef50_Q71VW8 Phosphosugar-binding transcriptional regulator, RpiR family n=15 Tax=Firmicutes RepID=Q71VW8_LISMF Length = 268 Score = 183 bits (464), Expect = 7e-45, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 125/278 (44%), Gaps = 15/278 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L I+Q Y L +K++A Y+L + D ++++ ++LA E G S S++ +F + + Sbjct: 1 MTILNEIQQNYNRLPNKEKQIAKYILEKSDELKNINIKELAEETGTSISTITRFCRHVRC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F LK+ ++ A P + E++ + T+ + Sbjct: 61 DSFVDLKMRVNTAATMVPSL-------------GYDDLFEEVYSFYHKVIDNTVKLIEPA 107 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 K+ E V ++ A+R+ + G+G+SGL A + +L+++G N +V D H ++ T ++ + Sbjct: 108 KIREVVQYIQEAKRVYICGVGSSGLTAVEMSQRLIRMGLNVISVNDPHMMIITSSITTKE 167 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D ++ IS +G EL A + KV T F + + + + + + Sbjct: 168 DFVIGISNSGNTPELVTALKIAKKNKSKVATFTSFENSEMTEISDVTIPVYNTLFVSKRY 227 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++ + + D++ + L+Q E + + + V Sbjct: 228 FANSQFSIMYVMDIISMMLLQN--ESYRDNMEKTINTV 263 >UniRef50_C6VNS3 Transcription regulator n=3 Tax=Lactobacillus plantarum RepID=C6VNS3_LACPJ Length = 292 Score = 183 bits (464), Expect = 8e-45, Method: Composition-based stats. Identities = 61/278 (21%), Positives = 114/278 (41%), Gaps = 2/278 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L IR Y L+ +D+K+ADY++ P S LA GVS ++V +F +++ + Sbjct: 12 VLTLIRSYYPNLSVTDRKIADYIIADPIKTAAQSISDLAAAVGVSTATVSRFVKRISFSS 71 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F L+ A + + + + + E +++ T V +E L Sbjct: 72 FRDFSRELTAAEPIEQTNAEAF--QDVEKQTTFKGIAESTFNSIRSSLDQTSQVMTEADL 129 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V +L +AR I G+G S + A + K ++ G A D L + D+ Sbjct: 130 KRAVELLLNARSIGFYGLGGSAVAALDGYHKFVRTGIPCAHNSDYDMQLMQAAQMNASDV 189 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + IS+TG ++ + V+A+T F + L + ++ ++AEE S + Sbjct: 190 AVVISHTGRNQQTLQVLATLTSQSVPVIALTSFGNSPLAKDSTVAFISVAEEINYRSEGL 249 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ AQ + D LF+ E + + + Sbjct: 250 TSLIAQMSIIDSLFLMTAVHGNIEMAESLGRVREAISQ 287 >UniRef50_Q03CI3 Transcriptional regulator n=10 Tax=Lactobacillaceae RepID=Q03CI3_LACC3 Length = 280 Score = 182 bits (463), Expect = 8e-45, Method: Composition-based stats. Identities = 67/278 (24%), Positives = 123/278 (44%), Gaps = 4/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L++++ L+ +KKLA YL PD A + +L+ GVS +++ +FA+ LGY Sbjct: 3 DFLVQLQIYKPNLSGQEKKLAAYLQAHPDHASQANISELSQLTGVSTATISRFAKALGYT 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F AL++AL++ + ++ D + + +K+ N A+ TL + Sbjct: 63 NFQALRMALAQ----TSPEDDHALFAELSPKDSVDTLAQKIFTSNIDALRTTLANLDTDA 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + V + A + L G+GAS LVA + K ++ A D H L P D Sbjct: 119 LTKAVKWITHAEHLGLFGLGASNLVALDGYHKFLRTAIPVAYAADYHMQLMAATHLGPRD 178 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++ S++G ++ A+ + ++ ITG + L + A +AEE + + Sbjct: 179 AMILTSHSGEDKDAIALAELAKKQQVPLIVITGSPTSRLVKMADAAFVAVAEESRYRTEA 238 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + A A+ + D LF+ + R A + Sbjct: 239 LHALIAEISIMDTLFMISAIKTDSQTAPLFRQVRATID 276 >UniRef50_D0XGH5 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0XGH5_VIBHA Length = 296 Score = 182 bits (463), Expect = 8e-45, Method: Composition-based stats. Identities = 67/276 (24%), Positives = 126/276 (45%), Gaps = 4/276 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + IR R L ++++ +A+ L + S +++A GVS + +VK ++KLG+ G Sbjct: 20 VIPNIRMRMPSLTRTEQSIAENFLKPHFMQKSTSIKEVAERLGVSTALIVKVSKKLGFSG 79 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK AL+ S S Q++ DD + K+++ + A+ LN + Sbjct: 80 FKQLKDALNAHH----HSDSYAPSEQLQPDDSCEQIVTKVLQNSINALTEILNFVDANMV 135 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + +AR I L G S ++ ++F KL++ G A+ RD H +L + S D+ Sbjct: 136 SAAAEAIINARNIELYAAGGSNIICEDFQHKLLRFGIRASVPRDRHLMLMSASVLSEKDV 195 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 +L +S++G +L A + G +++IT L Q + + LY A + + Sbjct: 196 VLVVSHSGQTVDLMDAVRLAKQSGATIISITNNFHAELSQLSDYPLYAPASPEPLLGKNG 255 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 A + + D L+ + + + A E + + V Sbjct: 256 IARLVKLAMIDSLYATIASKIPDQAEENLEKTTKAV 291 >UniRef50_D2AGN5 Transcriptional regulator, RpiR family n=1 Tax=Shigella flexneri 2002017 RepID=D2AGN5_SHIF2 Length = 333 Score = 182 bits (463), Expect = 8e-45, Method: Composition-based stats. Identities = 92/265 (34%), Positives = 150/265 (56%), Gaps = 3/265 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L +IR +++K+AD+L + + +SS+Q+A + G+SQSS+VKFAQKLG Sbjct: 68 MLYLTKIRNAESEFTGNEQKIADFLRARVSELKSVSSRQMAKQLGISQSSIVKFAQKLGA 127 Query: 61 KGFPALKLALSEALASQPESPSV---PIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 +GF L++AL ++ E + +H+ I DD L ++ KL +E A+ T + Sbjct: 128 QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALF 187 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 +L + + ++ A I +TG+G S LV ++ ++KLMKIG+ A D H QA Sbjct: 188 DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL 247 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 D+ +AISY+G ++E+ L A+ + G V+AIT + L++ A L T++ E Sbjct: 248 KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLADSPLRRLAHFTLDTVSGETEW 307 Query: 238 NSASISACHAQGMLTDLLFIALIQQ 262 S+S+S AQ +TDLLF+ L+Q Sbjct: 308 RSSSMSTRTAQNSVTDLLFVGLVQH 332 >UniRef50_A2RL41 Transcriptional regulator, RpiR family n=4 Tax=Lactococcus lactis RepID=A2RL41_LACLM Length = 283 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 71/280 (25%), Positives = 134/280 (47%), Gaps = 3/280 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ LL IRQ Y +KK+ADY+ + S+Q++A+E G S +++V+F++KLGY Sbjct: 1 MDTLLIIRQNYSNFTTVEKKIADYIFEVGEKMLEKSAQEVASEIGSSSAALVRFSRKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK LS + A + + + + KL + T S++ Sbjct: 61 DGFSQLKQKLSASYAVHEDDEDYYKE--VNDSETPSSIKNKLKVRVNHMVETTNAALSDD 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ V ++ A I + GIGAS +VAQ+ K +IG ++D H ++++ S Sbjct: 119 EIMAAVALIDEAESIFVFGIGASSMVAQDIFQKFSRIGKQVFFIQDAHLFVSSLSISDRK 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY-TIAEEQATNS 239 + + IS G +E+ A + + ++AIT + L Q + + L+ E+ + Sbjct: 179 TIFIGISMKGETKEVIELARVVRGMEIPIIAITSREESTLGQMSDYILHSVSGEDYQMRT 238 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 A+ + AQ + D+LF + + + +++ + +K Sbjct: 239 AATMSLMAQLYVVDILFYMFVSEHFTESYDKLEKTRDAIK 278 >UniRef50_A3DDB2 Transcriptional regulator, RpiR family n=5 Tax=Clostridiales RepID=A3DDB2_CLOTH Length = 299 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 58/281 (20%), Positives = 124/281 (44%), Gaps = 8/281 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L RI+ G ++ K +A++++ D A ++++ +L E GVS+S+VV+FA ++G+ Sbjct: 8 DLLKRIQAGMPGFSKGQKLIANFIINHYDKAAYMTAAKLGEEVGVSESTVVRFANEIGFD 67 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L+ L E S+ + R ++ + + +++ + + ATL +E Sbjct: 68 GYPKLQKVLREMNKSKLTAVQRIEVTSSRINEG--NILKSVLQSDMEKIKATLEEIDQES 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM--HALLATVQASSP 179 + V + +AR+I + G+ +S +A + I N V + + +S Sbjct: 126 FNNIVKSILNARKIYILGVRSSAPLASFLGFYFNLIFDNVRLVHTTSVSEMFEQIIHASR 185 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+++ IS+ + A G V+AIT + L + A H + ++ + Sbjct: 186 GDVVIGISFPRYSKRTINAMRFAQNQGATVVAITDSLYSPLAKNADHVITARSDMASF-- 243 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + A + + L +A+ E E + + Sbjct: 244 --VDSLVAPLSVINALIVAIGMSRKPHVQETFERLEKIWDE 282 >UniRef50_C5BVH6 Transcriptional regulator, RpiR family n=2 Tax=Actinomycetales RepID=C5BVH6_BEUC1 Length = 299 Score = 182 bits (461), Expect = 1e-44, Method: Composition-based stats. Identities = 73/278 (26%), Positives = 128/278 (46%), Gaps = 1/278 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L R+ L S++++A+ +L P + +QLA G S++SV +F + +G G Sbjct: 16 VLTRLPGLLPTLRSSERRIAEAILDDPQAVSRDTIEQLAARCGTSKTSVTRFCRTIGLAG 75 Query: 63 FPALKLALSEAL-ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + L+LAL+ + + ES + + +P +V ++L+ N A+ T+ Sbjct: 76 YTELRLALAGDVGRRRDESWRAELGSSADPQNPADVVVDELLTANVRALTETVRTLDRAA 135 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V L SA RI L GIG SG VA + + +IG A A + H L D Sbjct: 136 LAASVDALASAGRIDLYGIGGSGTVAADLQRRFHRIGRVAHAWSESHDALTGAAMLGASD 195 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + +A+S+TG E+ A G +A+T + +A+ A L T A E+ + Sbjct: 196 VAIALSHTGETSEVAAALALARDRGATTIAVTNYPGSAVAAAADLVLVTAAHEERARADG 255 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ HAQ + D L++ + + + +R + V+ Sbjct: 256 LAGRHAQMFVVDCLYVLVAGVLHDESQSGLRRTSEAVR 293 >UniRef50_C5C1Y9 Transcriptional regulator, RpiR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C1Y9_BEUC1 Length = 307 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 70/279 (25%), Positives = 125/279 (44%), Gaps = 1/279 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +R+ L S ++ A+ +L P + + LA +G S S+V + ++LG G Sbjct: 17 ILAELRRLLPDLPDSVRRTAERVLADPVASVAGTITDLAEASGTSPSAVSRLCRRLGVDG 76 Query: 63 FPALKLAL-SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 +PAL++A+ ++A AS + I I D L V L + A++ TL + Sbjct: 77 YPALRIAVVADATASASSPWEIDISRTIGPTDSLEDVAGTLGAATSRAVHDTLAGLDLDV 136 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + + ARR+ L G+ S ++ +L +IG + D+H L P D Sbjct: 137 LRDVAHAVAGARRVHLYGVSGSAVMTAELQLRLHRIGIATWSFADVHEGLTGAALLGPGD 196 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + +A+SYTG E +A+TG ++L A L T+ EE Sbjct: 197 VAIAVSYTGETIETLEMLRAAGSRDALTVAVTGAPRSSLAAVADRILVTVTEETTFREGP 256 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++A ++ + +LL++A+ Q E E + + V++ Sbjct: 257 LAARFSELTVVELLYLAVGQLTYERTTELLTQTALAVRR 295 >UniRef50_D0I0X8 Sialic acid utilization regulator RpiR family n=1 Tax=Vibrio cholerae CT 5369-93 RepID=D0I0X8_VIBCH Length = 282 Score = 181 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 53/276 (19%), Positives = 126/276 (45%), Gaps = 7/276 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L R+R +G + K +AD+++ D+A++L+ +LA + S+++V++ + LG+K Sbjct: 8 NLLSRLRYGMEGYSPKLKTVADFIVSNADSAQYLTITELARDTMTSEATVIRLCRDLGFK 67 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ ++AL+ ++ + + + + + + ++ T + ++ Sbjct: 68 GYSDFRMALAIEISQPQFTKNNDVAKEDG------DRIDDATQSAITSLQDTSILIDRKQ 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 ++ M+ A I G+GAS +V + +++L +IG ++ D H S+P D Sbjct: 122 INRICQMIHQADNIHCVGVGASSIVGRYLSFRLTRIGKSSTMFEDTHIAAMRAVKSTPSD 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L AIS +G +++ A + V+++T + L + + E + Sbjct: 182 LWFAISSSGSTKDVVYVATRAKKQQSPVVSLTNIRHSPLSVTSDEVMVAARPEGPLTGGA 241 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 ++ + +L D+L L+ + E ++ + + Sbjct: 242 FASKVSALLLVDILINQLVAEH-AEYAESVKDTAEV 276 >UniRef50_C4FU45 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FU45_9FIRM Length = 277 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 58/283 (20%), Positives = 130/283 (45%), Gaps = 14/283 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L RI + L+ ++ LA Y++ + +++ ++A E GVS +++ +F +K+G Sbjct: 1 MGVLERIEANFVHLSPKEQLLATYIMQESPYFTNITISEMAKETGVSAATITRFCRKVGC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + F LK+ L + + + + + + + T + SE Sbjct: 61 ESFVDLKIQLQASEGESASNHQN------------HDMFDTVSEFYNRIIQRTSELQSEY 108 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L + + +L A RI++ G+G+SGL A+ A +L ++G A + D H ++ + + Sbjct: 109 QLRQLIQVLSQANRIMVYGMGSSGLTARELAIRLSRMGLPATSETDSHMMIISSTVTRSS 168 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++AIS +G +++ A + G ++AIT ++L + A L + Sbjct: 169 DVVIAISNSGETKDVIDALGNAKQNGAILVAITSMKGSSLAKLADETLLVHNSRFVNSEF 228 Query: 241 SISACHAQGMLTDLLFIALIQQ--DLELAPERIRHSEALVKKL 281 ++ L D + + +++ + + I+ ++ +KL Sbjct: 229 FVNTQLPIFFLIDAITLMMLENPVFSQNMQKTIQEITSINQKL 271 >UniRef50_B9DJX2 Putative RpiR family transcriptional regulator n=1 Tax=Staphylococcus carnosus subsp. carnosus TM300 RepID=B9DJX2_STACT Length = 288 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 70/280 (25%), Positives = 130/280 (46%), Gaps = 7/280 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 ++ IR++ + L ++++ +A +LL P+ +S+Q L + S ++V++ A KLG+KG Sbjct: 6 LIIHIREQMKHLTKNEQHIAQFLLEHPEKVLEMSAQTLGDVTKTSSATVIRCAHKLGFKG 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LKL+LS + +I D+ R + KL+ + T + ++ L Sbjct: 66 FVDLKLSLSRN----LPQHEAHNYKEIAQDESPREIKRKLLSRAAYTLETTEVLLEDQAL 121 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD- 181 V L ++I++ G+GAS +VA++ K + G D H L + D Sbjct: 122 EALVDKLYDVQKIVVFGVGASHIVAEDIYQKFTRAGMEVIQSADAHVLATVLAGYHKKDN 181 Query: 182 -LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHC-LYTIAEEQATNS 239 L + +S +G +E A G V AIT + + L A L+ + E++ Sbjct: 182 VLFIGVSNSGHNQETLRLAHVAHYYGATVAAITSRSDSKLAGEADIVLLHDASSEKSLRL 241 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 A+ S+ AQ M D+LF + +D + + ++ V+ Sbjct: 242 AATSSLIAQLMTVDILFYTYLSKDYQAHVAHLSETKKAVE 281 >UniRef50_A8UCF6 Phosphosugar-binding transcriptional regulator, RpiR family protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8UCF6_9LACT Length = 292 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 127/277 (45%), Gaps = 1/277 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +R + ++K +AD+ + + + LA++ G+S++++ KF +K+G+ G Sbjct: 6 LEKLLRPYIKSFNDTEKIIADHFIKLGHDVVNKTLSNLADDTGLSEATIFKFVKKIGFDG 65 Query: 63 FPALKLALSEALAS-QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 FP K++++ + + + + + I +D + +KL+ N A+ + EE+ Sbjct: 66 FPNFKISVASNFQNIEERKNELTVFSDISKEDSSYAIAQKLVYSNKLALDNLIGSLDEER 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 +++ + ++ ++ I G GAS ++A + K ++ F + D H L+ P+D Sbjct: 126 INQALNLIYDSQTIHFFGQGASSVIALDSYHKFLRTRFLCNYISDYHMQLSYATKLGPND 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + S++G E A + ++ +TG L + +S +EE A S + Sbjct: 186 CVFLFSHSGETNETIEVARILRNNQVNIIVLTGNHHTDLVKLSSISFVVDSEESAFQSET 245 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +++ + D+L++AL+ D + + + Sbjct: 246 LTSRILYLTIIDILYVALMYHDEAKNKDSLEKIRKAL 282 >UniRef50_D1AYR1 Transcriptional regulator, RpiR family n=2 Tax=Fusobacteriaceae RepID=D1AYR1_STRM9 Length = 281 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 63/275 (22%), Positives = 139/275 (50%), Gaps = 1/275 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L+++R+ S+K +A +L+ + + ++++A E S S+V + +K+G Sbjct: 1 MSILVKLREN-NDFTSSEKDIAKFLMNNYKNIKKIDARKIAKETFTSVSAVTRTCKKIGL 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GF K+ L E LA+ + +++ I ++ R++ EKL K + +++ T + + Sbjct: 60 RGFQEFKIDLIEELANLEQQKLEFVNSDIERNNDTRMIIEKLNKLSISSLKETKLLQDPD 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + V +++ + I GIGAS +V + +K M+IG A S+ D Sbjct: 120 IIDKVVKLIKKKKVIDFYGIGASHIVCLDAQYKFMRIGKVCNAFGPFDLQYIQAVNSTDD 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +L + ISY+G+ ++ ++ + G + ++IT + N + A+H LY ++E SA Sbjct: 180 NLAIIISYSGMTEDIIKISEVLRNKGIETVSITMYGSNKVASNANHNLYVTSKESLKRSA 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 +I + + L D++++ + + +I ++ Sbjct: 240 AIYSRISMLNLIDVIYLKYSNMNFDEVSVKINETQ 274 >UniRef50_C0X148 RpiR family transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X148_ENTFA Length = 295 Score = 180 bits (457), Expect = 4e-44, Method: Composition-based stats. Identities = 62/280 (22%), Positives = 133/280 (47%), Gaps = 3/280 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RIR + L+ ++KK++DY + ++ + LANE GVSQSSV +F +K+GY G Sbjct: 6 LDQRIRIKKPNLSLTEKKISDYFVHSESLLTQMTLESLANEIGVSQSSVYQFVKKIGYSG 65 Query: 63 FPALKLALSEALASQPESPSVPI---HNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 F K+ ++ QP +V + I DD + +K+++ N ++ ++ Sbjct: 66 FQEFKIDIARNSNYQPTFQNVNSVNGADDISPDDDSITIAKKVLQANIYSLSNATQFLTK 125 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E L + ++ SA+ + G G S +VA + K ++ + + D H L+ V + Sbjct: 126 ELLDNVLALMYSAKTLHFFGQGGSSIVAFDSFHKFIRTNYRCNYIFDYHMQLSFVTKLTS 185 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +D + S++G +E A ++ + K++ +TG + + L + + + EE + Sbjct: 186 EDCVFIFSHSGKTKESINLARQVKKTNAKMITLTGNSGSELAGLSDEAIIVVTEEGLFRA 245 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S+++ + + D+L+ + + + + ++ + Sbjct: 246 ESLASRISYLTVMDILYTNTMYHNFDQNADSLKKIRDNIS 285 >UniRef50_A6UIG8 Transcriptional regulator, RpiR family n=8 Tax=Rhizobiaceae RepID=A6UIG8_SINMW Length = 287 Score = 180 bits (457), Expect = 4e-44, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 106/279 (37%), Gaps = 7/279 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ +++ L+QS+ ++AD LL + A + S +LA +A VS +V +F ++LG Sbjct: 1 MDIFATLQEEKGRLSQSENRIADILLNDFEFAVNASIIELAGKADVSPPTVTRFCRRLGC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + F K+ L+ +Q V + +I + A+ Sbjct: 61 ESFSDFKVQLARTPYVGMRYLKPEPKSQ-----EPGDVAQDIITKAQNALLLLHRSLDLA 115 Query: 121 KLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L A I G G S ++A F +L ++G + D + A+ P Sbjct: 116 AIERAADQLAQAEMIYAFGSGGNSSMIAGEFQNRLFRLGMRITSSSDHSMQMMMAAAARP 175 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+++ S++G EL A +A+T + + Q A + E Sbjct: 176 ADVIVGSSFSGRNAELVRAFILAREAKVPTIALTQS-GSPVAQAADITVPVDLPEGNNIY 234 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 S A L D++ + + A +R + + Sbjct: 235 RPTSTRIAYLALLDIVASLVAYRVQPQATVTLRRIKQQL 273 >UniRef50_UPI0001BCD92E RpiR family transcriptional regulator n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCD92E Length = 288 Score = 180 bits (457), Expect = 4e-44, Method: Composition-based stats. Identities = 58/268 (21%), Positives = 124/268 (46%), Gaps = 2/268 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +I Y L ++K+LADY+L ++ LA G S ++VV+F +K G Sbjct: 6 SILEKIFSIYPVLFDAEKRLADYVLQNEAKVVDMTVSDLAAACGTSDATVVRFCKKCGCN 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ +++ +A++P + + + + + + + TL Sbjct: 66 GFHHLKINMAKEMATKPSDGAPIVGSNELDCARMDVSLRNIFASKQEELRQTLAEIDPAV 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 V +R+AR I +G + VA + A+K ++G A + +LA + ++PDD Sbjct: 126 FRSVVERIRAARFIFCAAMGNTIPVAMDAAYKFNELGLTAISAPVWENMLAMMHTATPDD 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA-TNSA 240 +LLAIS +G ++L G ++ +T +++ + + L+ +++E+ + Sbjct: 186 VLLAISASGETKDLMRIVSAARGRGAYIVLVTNQVHSSIARVSDRVLHAVSQERMFFRTF 245 Query: 241 SISA-CHAQGMLTDLLFIALIQQDLELA 267 S S+ + + + ++ L+ + + Sbjct: 246 SFSSTRLSMTAVIEAVYYMLLSVKRDSS 273 >UniRef50_C6B6F5 Transcriptional regulator, RpiR family n=7 Tax=Alphaproteobacteria RepID=C6B6F5_RHILS Length = 287 Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats. Identities = 54/279 (19%), Positives = 106/279 (37%), Gaps = 7/279 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ +++ L+ S+ ++A+ ++ + A + S +LA A VS +V +F ++LG Sbjct: 1 MDIFSTLQEDKGRLSPSESRIAEIIVNDFEFAVNASIIELAERAKVSPPTVTRFCRRLGC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + F K+ L+ V + +I + A++ Sbjct: 61 ESFSDFKVQLARTAHIGVRYLK-----PESKSTDPADVAQDIITKAQNALFLLHRSLDLA 115 Query: 121 KLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + V+ + A I G G S ++A +L ++G A D L A+ P Sbjct: 116 AIEAAVSHIAKADMIYAFGSGGNSSMIADELQNRLFRLGLRITASSDHSMQLMMAAAARP 175 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+L+ S++G EL A + + K +A+T T + + + A + E Sbjct: 176 GDVLIGSSFSGRNMELVRAFELARQTKVKTIALTQ-TDSPVAKAAEIVVPIDLPEGHNIY 234 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 S A D+L + A +R + + Sbjct: 235 RPTSTRIAYIATIDILSSLVAYAVQPKATTTLRRIKQQL 273 >UniRef50_D2BPE4 Transcriptional regulator, RpiR family n=1 Tax=Lactococcus lactis subsp. lactis KF147 RepID=D2BPE4_LACLK Length = 273 Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats. Identities = 53/280 (18%), Positives = 125/280 (44%), Gaps = 10/280 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L +I+ +Q +S+KK+A+++L P + LA + VS++S+ +F +KL Sbjct: 1 MNILDQIQVNFQNFFESEKKIAEFILKNPKKVIDMPIALLARNSNVSEASISRFCKKLNL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+ L+ ++ + ++ + L + + + K T + A + + Sbjct: 61 TGFHQLKIELARIQDNE--------NIKVNKNTSLNELIKNISKIKTTELIAATDNLDID 112 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + ++ + + G + VA++ +++ ++G + D A + Sbjct: 113 NLQSIIKIITNVKLTHFVASGNTIPVAEDASYRFNQLGITSVVFDDWQVQTAFTLNMRKE 172 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DLL+ IS +G + L + +++IT + + + ++ L + + + ++ Sbjct: 173 DLLIVISNSGESKSLIKLINIAKEKKIPIISITNHPDSPIARLSNFHLTSFSRDYFFHND 232 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + L +L+F+ L Q + E I+ E ++ + Sbjct: 233 YYFSRLSAMYLIELIFLILSQD--KSRLENIKLHEQIISE 270 >UniRef50_Q28KP3 Transcriptional regulator, RpiR family n=6 Tax=Alphaproteobacteria RepID=Q28KP3_JANSC Length = 306 Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats. Identities = 85/247 (34%), Positives = 136/247 (55%), Gaps = 1/247 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L ++ + L+ D+++AD +L PD LSS +LA AG SQSSVVKF QKLG+ Sbjct: 27 SILTIMQAQLPTLSAGDRQIADTILGDPDRMARLSSGELARAAGRSQSSVVKFCQKLGFS 86 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ L+LA++ A A+Q +H+ I D + +KL+ A+ TL++N + Sbjct: 87 GYQDLRLAVTRAAATQKAPNDA-VHSSIEVSDDASMTAQKLLASKIHALQETLSINPAKN 145 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L L A R+ L+G+GAS LVA++F +KL K+G + D H +A +PDD Sbjct: 146 LDAARDALNGAARVQLSGVGASSLVARDFVYKLQKLGISVLFDADSHIQMAHSATLTPDD 205 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L+++S +G E A+ + G ++ +TG PN L A L T+ +E S++ Sbjct: 206 VLVSLSQSGFSLETLRIAEAAAKRGATIITVTGLHPNPLADVADKALCTVTDEDQVRSSA 265 Query: 242 ISACHAQ 248 I++ AQ Sbjct: 266 ITSRDAQ 272 >UniRef50_D1AK74 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AK74_SEBTE Length = 284 Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats. Identities = 68/277 (24%), Positives = 137/277 (49%), Gaps = 6/277 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 ++++ Y L +S+KK+A++++ + + ++S ++ + V Q++V++F++KLGY Sbjct: 10 FQVKLKSVYNDLTKSEKKIANFIMKNFEKTKTMTSYDISKKVNVGQATVIRFSKKLGYSS 69 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F L ++++ + I D + K+ + + TL +N Sbjct: 70 FNELINSINK------LDQEDILEKNISLGDDIATTNTKIANQYIDVIKLTLELNPVYVF 123 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 E + + +A RI++ GIG S +V+ +F KL ++G NA D H + + +DL Sbjct: 124 EEVIEAIIAAERIVVLGIGNSAIVSTDFVNKLARVGMNAFTNLDTHLQFSMISNLGKNDL 183 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L+ IS +G RE+ AA + ++++IT FT N L + L T + + + Sbjct: 184 LILISDSGETREIIEAAKLAKQNKTRIISITKFTKNKLHAYSDFILKTASFDINLRLDAT 243 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ Q + D++FI +++ D E I +S+ VK Sbjct: 244 TSRITQFTIIDMIFINILKTDFSKYKEIITNSDNAVK 280 >UniRef50_C2H8J8 Bifunctional RpiR family transcriptional regulator/sugar isomerase n=16 Tax=Enterococcus RepID=C2H8J8_ENTFC Length = 286 Score = 180 bits (456), Expect = 6e-44, Method: Composition-based stats. Identities = 62/280 (22%), Positives = 138/280 (49%), Gaps = 6/280 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + RI + + ++KKLA+Y++ + +++ +LA +G+S +VV+F++K+G+ Sbjct: 5 MSVISRIESMMEDYSSAEKKLANYIIGNIEKVPTMTANELAEASGLSAPTVVRFSKKIGF 64 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + K+ +S ++ + I ++ + KL A+ T+++ EE Sbjct: 65 QSLTDFKITISTE----LQTGIDEGFSDIEANESFYSIKNKLGNNAQVAIKETVDILEEE 120 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + V L +A + L G+GAS LV ++ K ++G +D+H LL + ++ Sbjct: 121 TIQKVVECLETAESVFLYGVGASSLVVEDILQKWSRVGKPIIFEKDIHVLLPQLVSNEKK 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE-EQATNS 239 +L +S +G ++ A+ + +++A+T F N L + A + T E S Sbjct: 181 KVLWLVSNSGRSTDVVALAELAKNMNIEIIALTQFGNNPLSKIADVLVQTSRPKEITNRS 240 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 A+ ++ AQ D++F + ++ E E+++ + ++ Sbjct: 241 AATNSLLAQFATIDIIFYFYMAKN-ESLSEKVKKTREAIQ 279 >UniRef50_B7LQI9 Transcriptional regulator n=32 Tax=Gammaproteobacteria RepID=B7LQI9_ESCF3 Length = 301 Score = 179 bits (455), Expect = 7e-44, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 117/279 (41%), Gaps = 11/279 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I +R+ L ++K++A ++L A L +LA SQ+SV +FA+ LG K Sbjct: 20 DIISCITERFMALTATEKRIAQFILDDVPAAVELPIAELARLTQTSQASVTRFARALGCK 79 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 LK+ L+++LA + + + + + Sbjct: 80 DVRELKVKLAQSLAIGQRFILDVPDLDG---------VQGIYESIISVLETHRRSLDMNA 130 Query: 122 LHECVTMLRSARRIILTGI-GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + V+ L AR+I+ G G S + +Q ++L ++G + D + A P Sbjct: 131 ISQAVSWLSQARQILALGTGGGSTICSQEIQYRLFRLGLPVVSQNDALMMRMMCSAVMPQ 190 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ +S G E+ +A + G +V+AIT L ++ L + +E Sbjct: 191 DVVIVLSLGGYTPEIIESAAIARQYGARVIAIT-PAQTPLAEQVDLVLPLLVQESDYIFK 249 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + +A + D+L L + A +R+R + ++ Sbjct: 250 PTPSRYAMLAMVDVLATELAMANKAQAKDRLRRIKLVLD 288 >UniRef50_C2KD15 RpiR family transcriptional regulator n=3 Tax=Lactobacillus crispatus RepID=C2KD15_9LACO Length = 279 Score = 179 bits (455), Expect = 8e-44, Method: Composition-based stats. Identities = 62/274 (22%), Positives = 128/274 (46%), Gaps = 9/274 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L ++ R L Q ++K+A ++L P + + QLA+ VS +++ +FA+++ Sbjct: 1 MTFLTDLQNRLPDLPQQERKIALFILQDPQFIQSANINQLASTIKVSNATITRFARRVNC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F LK+ L+ A AS + I D + ++ + T N + Sbjct: 61 SSFTDLKVKLAAAAASSQVNT-------ITNQDNSKTTAHQVYDFYNRVLSETQNKLDIK 113 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L + + +++SA+R+ GIG+SG + +L+++G +A A + + + T S D Sbjct: 114 QLKKIIQLIKSAKRVYFYGIGSSGYTSLEATQRLLRMGISAFAETESNNMFMTSSIISKD 173 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++AIS TG L A + + V+A+T + + L Q A + ++ Sbjct: 174 DLIIAISSTGSTDSLVRAIELAKKNKATVVALTSYDNSPLAQLADIVVGVQDTNYINDAR 233 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 I++ + + D++ L++ + +R+ + Sbjct: 234 FINSQFSIMYVIDVITTLLLKNN--KYHDRMTRT 265 >UniRef50_UPI000197BCAC RpiR family transcriptional regulator n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197BCAC Length = 283 Score = 179 bits (455), Expect = 8e-44, Method: Composition-based stats. Identities = 61/274 (22%), Positives = 129/274 (47%), Gaps = 2/274 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L++R+ L+ +K++A+Y++ + +S Q LA E VS +++++ KLGY+G Sbjct: 2 IDLKLREARDSLSTKEKQVAEYIIANKKNMQSMSIQSLAQENKVSTTTILRLCHKLGYQG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK+ L ++ + S + I +D + V K+ +++ T + + Sbjct: 62 FSDLKIDLISSINHK--SYGTLLQEDIDINDSMETVNHKVGLIEKSSIEETCALVNLNAF 119 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 ++ +++I++ G G+SGLVA+ F ++L+KI + D + V +DL Sbjct: 120 KLANELISKSKKIVIYGAGSSGLVAKEFEYQLIKIKKDVNCHLDYSIQFSIVNTLDQNDL 179 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ IS++G E + +AIT +++ A L+TI+ E + I Sbjct: 180 VIVISHSGENHECIKLLTLARELKVPTIAITKMGQSSVSSLAETVLHTISTEHVSRLIPI 239 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + +Q + ++L L + + ++ + A Sbjct: 240 RSKISQLTVINMLITNLFIKQYDERIQKQISTRA 273 >UniRef50_A8RDU7 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RDU7_9FIRM Length = 281 Score = 179 bits (454), Expect = 9e-44, Method: Composition-based stats. Identities = 58/278 (20%), Positives = 127/278 (45%), Gaps = 2/278 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L+++R+ Y L+ S+ ++ Y+L +S+Q+LA ++ S ++V++ ++L Sbjct: 3 MSVLVKLRE-YHTLSNSENEVRMYILRNSKKVISMSTQELAAKSYTSPATVIRLCKRLEL 61 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQ-IRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 KG+ LK+ L+ + + + + D L + +K+ + ++ T + Sbjct: 62 KGYSELKIQLASEIKAFETMNLDVVDQTTFKKGDSLTELIDKVTDISIHSIEETRLLLDY 121 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E L + A I L G+GAS +A + +K M+IG + + + + S Sbjct: 122 EVLLCVARQIMDASIIDLYGVGASNNIAFDAGYKFMRIGKSISCLSLIDRQRIQAINSDS 181 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 + ISY+G E+ A + + ++ITG N L + L+ + E + Sbjct: 182 SHFAIIISYSGETPEIIEIAKILEKNNVPAVSITGSIQNQLVNLVEYNLFVSSRESNFRN 241 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 +I + + + DL++I I + + + +R+ + + Sbjct: 242 GAIVSRTSTLYMLDLIYITCISLNYDDSAKRLGQTLTI 279 >UniRef50_Q02YU6 Transcriptional regulator n=4 Tax=Lactobacillales RepID=Q02YU6_LACLS Length = 273 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 58/278 (20%), Positives = 117/278 (42%), Gaps = 11/278 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I+++Y+ L +S+KK+A+Y+L + + + + V +++V+F QKLGY Sbjct: 1 MKIETVIKEKYELLTKSEKKIANYVLASKERIVYGTMNDIKKAIKVGDATIVRFCQKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+ +++ SQ S + ++ ++ T + E Sbjct: 61 SGFSDLKIEVAKESYSQKSSNRTDLTLFFDENEN----------SIIEILHETKSKLDLE 110 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + ++ A I + G+G SG A++ ++IG A+ H L T Sbjct: 111 QFEKSSKLISEASAIYIFGVGLSGNTAKDLEAMFLRIGVPVKAISGSHFQLQTAALLKKT 170 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++ IS +G EL + +++ IT + L Q + L T E+ + Sbjct: 171 DLIIGISLSGKTLELFESIKIAKEQKAQIITITSSDYSPLAQLSDINLQT-VNEEFFDGG 229 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 S++ +Q + ++L + + + + V Sbjct: 230 SLTGKISQLYICEILVKNHERLYKDKSIQSREAIIRAV 267 >UniRef50_UPI00016A71F3 transcriptional regulator, RpiR family protein n=1 Tax=Burkholderia oklahomensis EO147 RepID=UPI00016A71F3 Length = 300 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 62/279 (22%), Positives = 115/279 (41%), Gaps = 6/279 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + I R LA + + +A L +P+ A ++A AGVS+ +VV+F + LG+ Sbjct: 11 DLFSLIHARLPDLAAAQRLVAKVFLDKPEWAMQAHVNEIAVFAGVSEPTVVRFCRALGFH 70 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G KL +++ +A SV +H + D + + K+++ + + E+ Sbjct: 71 GLRDFKLRVAQQVALG----SVALHRNVTAVDSIDEIVGKVLRSSADILLDIERQLPREQ 126 Query: 122 LHECVTMLRSARRIILTGIG-ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + ++ L SA R+ G+G SG VA + +L + G A D + + + SP Sbjct: 127 IKRAISALGSAHRVDCYGVGTTSGFVAADAQARLFRFGIQAQTYTDANMQMFSAATLSPG 186 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D ++A+S+ G L A G V+ I L L Sbjct: 187 DGVIAVSHFGRMPFLLEAVRVARERGAVVIGICE-PGTPLAGECDIPLTFALPASVNAYI 245 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 AC A + D+L + + + E++R + ++ Sbjct: 246 GSDACIAHLAIIDILIVGVAFERGAAGIEQLRRLQNVLS 284 >UniRef50_B7X566 Transcriptional regulator, RpiR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X566_COMTE Length = 282 Score = 179 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 61/283 (21%), Positives = 124/283 (43%), Gaps = 10/283 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L ++ + L ++K++ ++ P +S+ ++A+E VSQ +VV+F + LGY G Sbjct: 1 MLDQVMATLETLTPAEKRVGKLVIENPRRFASMSTSEIASECFVSQPTVVRFCKGLGYGG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 K L + +H+ + D V K++ + A + + + Sbjct: 61 LTQFKQKLRGDRSDG----VPYVHSSVDAGDTSFNVALKVVDSSIATLALFRTYVPKISI 116 Query: 123 HECVTMLRSA----RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 L +A R + G G SG+VAQ+ + ++GFN+ A+ D ++ + + Sbjct: 117 ERASNTLAAAYSEQRSLSFYGSGHSGVVAQDAQLRFSRLGFNSTALNDGYSQVLNAASRK 176 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D+++A+S +G +EL + D R G V+A+TG L S L T E Sbjct: 177 EGDVVVALSCSGRTKELLESVDVAKRQGATVIAVTGS-GTPLATMGSIHLATDHLEDIDR 235 Query: 239 SASISACHAQGMLTDLLFIALIQQDL-ELAPERIRHSEALVKK 280 +S+ ++ D++ A+ Q +++ ++ ++ Sbjct: 236 YLPMSSRLLHLVVIDIVATAVALQIGCGRLQDQLERTQNHLRH 278 >UniRef50_D0R5V5 Transcriptional regulator n=10 Tax=Lactobacillus RepID=D0R5V5_LACJF Length = 272 Score = 179 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 64/280 (22%), Positives = 120/280 (42%), Gaps = 11/280 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + R Q L +S+ KLA+Y+ + + + + L +++V+ +KLGY Sbjct: 1 MEFIQRYNQNKDKLTKSENKLANYIATHTEHVIYDTIKSLGTANNTGDATIVRLCKKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+AL++ + K++ +++ T + + Sbjct: 61 SGFSDLKIALAQDSMMTTSKSHEEAQ-------TSSELSSKVL---ISSIEKTEELINPS 110 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V++L ARRI + G+G SG A+++ ++IG A A D H + S D Sbjct: 111 VLKQAVSLLAKARRIHIFGLGHSGESARDYERTWLRIGLIANAESDPHIQVQVATLLSKD 170 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++ +S +G ++ + G K++AIT + + Q L T E N Sbjct: 171 DLVVGLSLSGHTKDTYDSLKVAKEYGAKIIAITNDLTSPIAQLGDVSLQTSVSEF-MNIG 229 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +++ +Q L D+L + + + + A V K Sbjct: 230 TVAGQVSQLYLCDVLAREYEKLNKVDVDKIKEQALAAVMK 269 >UniRef50_C9A459 Phosphosugar isomerase transcriptional regulator n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A459_ENTGA Length = 268 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 64/267 (23%), Positives = 126/267 (47%), Gaps = 8/267 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + I L+ +D KLADY++ D ++S LA + S ++V++F++KLG+ Sbjct: 1 MSVVTTIESIKNELSTTDLKLADYIVENLDEIPTMTSNVLAVHSNTSPAAVIRFSKKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F KLAL++ + ++ ++ I+ DD + K+++ N + AT + E+ Sbjct: 61 SKFSDFKLALTKDIENR----IYNEYSDIQNDDSFQTAKNKILRNNKMIIDATDPILDEQ 116 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + V + A+RI + G+G S L A++ K +IG +D + L ++ D Sbjct: 117 TVQQVVDKMFHAKRIYVYGVGTSVLAAEDIRQKWTRIGKTVIFDKDRYLLTQQMKNDGAD 176 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ----A 236 L IS++G R++ + +G L ++ N L ++ ++T E Sbjct: 177 SLFWGISHSGKNRDVLSLVEIAKSLGMPTLGMSQLGQNQLTKKVDTPIHTARTEDIKNGH 236 Query: 237 TNSASISACHAQGMLTDLLFIALIQQD 263 S + + Q + DLLF +++ Sbjct: 237 YGSGATHSIILQIVTIDLLFYFYMRRL 263 >UniRef50_C0C246 Putative uncharacterized protein n=2 Tax=Clostridium hylemonae DSM 15053 RepID=C0C246_9CLOT Length = 292 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 114/278 (41%), Gaps = 3/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L R L ++K++A+++L P +S ++LA ++++V+ + +G Sbjct: 9 NILATTRFLLPSLTAAEKRVAEFVLASPKEVTRMSLKKLAVRCECGEATIVRLCKTIGVS 68 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ LK L ++ + + ++ + N + TL V + E+ Sbjct: 69 GYAELKSLL---ETQLQLPAVKEESVRLSTGQGMGEIVARVFELNILNLRRTLEVAAVEE 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 +L +A +I IG + + + +IG++ A D + D Sbjct: 126 YENACEVLSTANKICFFAIGDAMFPCSYASLRFRRIGYDCYADSDADVQIVNACNMKEGD 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + +AIS++G +++ A G + IT + L + + LY + + + Sbjct: 186 VAIAISHSGRTKQVVEAMRIAKSRGAVTICITKAGKSELTKYSDIVLYNVTTDTTVDKEI 245 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 I+ A+ + D +++ ++Q+ + R++ +K Sbjct: 246 IARRVAEQAMLDAVYMGVLQKMEANSFARLQEVSENLK 283 >UniRef50_C0X6G8 RpiR family transcriptional regulator n=23 Tax=Enterococcus RepID=C0X6G8_ENTFA Length = 283 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 70/282 (24%), Positives = 135/282 (47%), Gaps = 3/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + IRQ+Y+ ++ +K++ADY+L P L++ ++A+ + S +SV +F+++LG+ Sbjct: 1 MEPIRSIRQKYKDFSKVNKRIADYILKDPTRLLSLTANEIASNSETSPASVTRFSKQLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + LKL+++ + I + DD + + K+ A + ++ Sbjct: 61 DSWEELKLSIAA--VQAASNGKKDIDPIVAADDSVDTICMKVESLLNATIEDLFYTVDKQ 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + ++ A +I L GIGAS L N K + G A D H +L + ++ Sbjct: 119 ALERAIAHVKKAEKIHLVGIGASSLTTYNLYHKFNRAGRQAIFNYDSHMMLEFLNYATAQ 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L+ +SY+G+ +E +A + G V+ IT ++ + L E Sbjct: 179 DILITVSYSGLTKEALIACEIAKNRGATVIFITSNDGENVRSLSDEVLLVPNNEHLIRVG 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPER-IRHSEALVKKL 281 +IS+ + + D+L++ IQ DL+ ER + + LV +L Sbjct: 239 AISSIASSMAIGDVLYLGSIQDDLDTEIERNMIETSQLVSRL 280 >UniRef50_C8P0W4 RpiR family phosphosugar-binding transcriptional regulator n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P0W4_ERYRH Length = 285 Score = 178 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 63/282 (22%), Positives = 114/282 (40%), Gaps = 3/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + RI+ L+ ++ K+A Y+L P L+ +L+ S S++ +F +K+ Sbjct: 1 MLLINRIK-NSTQLSDTESKIAQYILENPQLVTQLTIHELSEITYASASTITRFCRKMKT 59 Query: 61 KGFPALKLALSEA-LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 +GF K+ L+ + + + + + + ++ N +M T N Sbjct: 60 EGFSDFKVKLAGELSSFSITENRIRDDVPFQSNHTSTEIVQSILSLNYQSMSDTYNNIDL 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E+L + A I L G G S ++AQ+F +KL +I + + Sbjct: 120 EQLERIAHKIYYAPHIYLYGSGQSLILAQDFQYKLFRIELDCNLETSLGFQSLKANTQPL 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT-IAEEQATN 238 D + L ISY G D ++ + ITG N L AS ++ EE T Sbjct: 180 DSIALIISYYGQNEHNKTIVDSLVERNIPYILITGPLNNPLCTHASEVVHVSPQEELVTK 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 AS S+ + ++ D ++ + D E + I +KK Sbjct: 240 MASFSSRTSMQLVLDFIYALIFAIDYEKNQKIIEKHPWYIKK 281 >UniRef50_B7CB00 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CB00_9FIRM Length = 291 Score = 178 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 51/281 (18%), Positives = 116/281 (41%), Gaps = 4/281 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + RI ++ + +K +ADYLL +++S LA S S++ +F KLG G Sbjct: 2 IIERIIKQ-EEFTDVEKSIADYLLKNGYEVKNMSISSLAQVTYSSTSTITRFCHKLGLDG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + ++ + + + V ++ G+D + ++L + N + T++ + +L Sbjct: 61 YKKFQILFNSEYEAYEKKGLVNVNYPFTGEDSYEQIAKQLERLNQETIAKTISCFNYNQL 120 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V + A I + +G S VA F K+++ G + L A + + + Sbjct: 121 NRIVRRMDKADMINIFSVGTSVTVAMEFQQKMLRFGKIVNLTQQACFLPGYALAGTENTV 180 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ---ATNS 239 L IS +G R++ + + + G + +T + + + + EE Sbjct: 181 NLVISLSGENRDVVESLNLLKEQGRYTVGMTSTPNSTVARECKEVILVDIEENNSYEAKI 240 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + A + D LF L + + + + + ++++ Sbjct: 241 DTFAIYSAFHFVLDCLFSFLYKYNFDSNTKITKEKAYMIER 281 >UniRef50_C5D4L1 Transcriptional regulator, RpiR family n=1 Tax=Geobacillus sp. WCH70 RepID=C5D4L1_GEOSW Length = 282 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 52/282 (18%), Positives = 120/282 (42%), Gaps = 6/282 (2%) Query: 1 MN-GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 MN I ++ ++++ +K+A Y+L P+ + +LA AGVS+++VV+FA LG Sbjct: 1 MNEVYRLIAEKLPEMSRAQRKIAKYVLNNPEAVPFFTVGKLAKMAGVSEATVVRFATFLG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 + G+P + A+ E++ Q + ++ D + + ++ +E+ + A Sbjct: 61 FSGYPEWQQAMQESMKRQLTTVERLKISEEVYDSEDKSIF-EMFQEDIERIKAMSVQIDM 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + ++ V + A+RI + ++ + + + NA +R+ H + + + Sbjct: 120 DLFYQAVQYITDAKRIFIIANRSAVSLGLFLEFYFDILFENAELIRNPHGISEKLFRLNK 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD+++ +S+ + A G K++ IT + L L E + Sbjct: 180 DDVVIGLSFARYTKSTIEAVAFAKDRGAKIIVITDHLLSPLVSYGDVTLCAPTEMPSF-- 237 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 I + A L + L + ++ + + E + ++ Sbjct: 238 --IDSFVAPLSLVNALITEVGRRKRSEVEKHLSDLEEIWERF 277 >UniRef50_D1PSB4 Transcriptional regulator n=3 Tax=Clostridiales RepID=D1PSB4_9FIRM Length = 282 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 66/282 (23%), Positives = 127/282 (45%), Gaps = 5/282 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N +R RY L +S +++ADYL + A++LS LA E GV+++++ +F + LG+ Sbjct: 5 NFWELLRSRYSELTRSGRRVADYLTRHAEEAQYLSISSLAAECGVAEATIFRFCRSLGFD 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ +K++L++A P+ +++ + A+ T +V + E Sbjct: 65 GYNEMKISLAQA----NAIPTAAGADKLEPGADTATLCTHASAVALEAINGTRSVLNPEA 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + T+L+ AR++ G G S ++A + + + D H P+D Sbjct: 121 IDAAATLLQRARQVFCFGQGGSQILANDIWARFATVSTKFRTAGDSHMQTIAASLMVPED 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++L ISY+G R++ + G KV+ +T + A L A+E + S Sbjct: 181 VVLFISYSGSTRDMMETLRIVKGNGAKVILLTHYADAPGTALADVVLLCGAKESPLDGGS 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK-KLV 282 I+A A + ++L + + ELA + + KL+ Sbjct: 241 IAAKIAVLFVAEVLVLRFTLDNQELAAIARERTSKALAPKLL 282 >UniRef50_C6J2D0 Transcription regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J2D0_9BACL Length = 284 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 72/277 (25%), Positives = 132/277 (47%), Gaps = 5/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L ++ + L +S++K A Y+L LS +A++AG S +++ + + LG Sbjct: 5 SVLTQMEAMLEQLPESERKAAQYILTASAEVSGLSIHAVADKAGTSAAAITRLCRSLGLS 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GFP LK+ LS P P + I + ++ V +K + + A+ + E Sbjct: 65 GFPDLKMRLSVD----NAKPQRPGYYDIERGETIQNVIQKTVSNSLQAIQDMMLHLQPEL 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V R A I + G+GAS +VA + A K +++G A A++D H + A + ++ P Sbjct: 121 IEQVVDSFREASVIHMYGVGASAIVAADAAQKWLRLGKQAFALQDEHLIAAALASAPPGA 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSA 240 L + ISY+G +E+ + G + + ++ F + + + A LYT A E S Sbjct: 181 LFMGISYSGNTKEVLQLFRVAQKYGVRTIGLSRFGNHKVAELADLMLYTPQAPEATLRSG 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + S+ AQ ++ D+LF A E R+ + Sbjct: 241 ASSSRLAQLVMIDILFFAYASTQYEETILRLSQTHEA 277 >UniRef50_C3RHU3 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RHU3_9MOLU Length = 281 Score = 177 bits (449), Expect = 3e-43, Method: Composition-based stats. Identities = 56/265 (21%), Positives = 116/265 (43%), Gaps = 2/265 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L ++R+R S+K +A+Y+L P+ LS ++L E S+++V++ +KL Sbjct: 5 ILEKLRERK-RFTNSEKLIAEYVLKHPEQLYQLSVEELGKETYTSKATVIRLCKKLEVNS 63 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + K + S+ + + + + + + ++ T + K+ Sbjct: 64 YQEFKRQVEFEYNELSRISSLLKDEPVDENSTYQDIVKVIPTIYDKSIVQTRLDLDQNKM 123 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + L A+RI + G G S +A A+K+M +G A ++ Q +S + Sbjct: 124 IQVINRLSQAKRISIYGTGISYTIASQAAFKIMTLGKECDAHSGINEHFILSQKNSRQCV 183 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + IS+TG E+ A + + G V+AI G LQ L + + + I Sbjct: 184 AILISFTGNNSEMIKIAKYLKKAGIYVIAIGGKKG-ELQNYCDIYLNVYSSQDILSLEVI 242 Query: 243 SACHAQGMLTDLLFIALIQQDLELA 267 ++ A + D++F++L+ +D + Sbjct: 243 TSFTATMYVLDVIFVSLLVKDYQSN 267 >UniRef50_A6D304 DNA-binding transcriptional repressor RpiR n=1 Tax=Vibrio shilonii AK1 RepID=A6D304_9VIBR Length = 289 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 65/279 (23%), Positives = 128/279 (45%), Gaps = 4/279 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + IR L ++++ +A+ L + S ++A VS + +VK ++KLG+ G Sbjct: 13 VIPNIRMMMPSLTKTEQSIAENFLQPHFLQKSTSINEVAERLSVSPALIVKVSKKLGFSG 72 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK +L +Q E+ S ++ DD + K+++ + A+ LN + Sbjct: 73 FKQLKESL----YAQSETQSYAPSERLLPDDSAEKIVSKVLQNSINALTEILNFVDVSMV 128 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 L AR I L +G S ++ ++F KL++IG ++ +D H +L + + D+ Sbjct: 129 DAAAEALLKARNIELFAVGGSSIICEDFQHKLLRIGIKSSVPKDRHLMLMSASIMTDQDV 188 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 +L +S++G +L A + + G V++IT L + LY A + + Sbjct: 189 VLVVSHSGQTVDLMDAVRQAKQSGATVISITNNYHAELSSLSDIPLYAPASPEPVLGKNG 248 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +A + + D L+ + + LA E + + V++L Sbjct: 249 TARLVKLAMIDSLYATMASKMPSLAEESLSKTIRAVERL 287 >UniRef50_B7C842 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C842_9FIRM Length = 276 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 122/279 (43%), Gaps = 6/279 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L I Y S+KK+ADY++ P +++ +QLA SQ+SV +FA+K Sbjct: 2 ILDTIHGHYNSFFDSEKKIADYIIQHPKEVVNMTIKQLAQACNTSQASVSRFARKCQMDS 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK+ L+ ++ E S I + E ++ + + AT+ ++ Sbjct: 62 FHHLKVNLARDCVNEIEQKSNTIST-----SDISGSLETILSNKISELTATIRNIDVDQF 116 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 ++++++A+ +++ +G + VA + +K +IG ++ +D+ Sbjct: 117 SVILSLIQNAKHVLVCAVGNTVPVALDCMFKFNEIGILTFTSTIWENQVSYALGLDSNDV 176 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++AIS +G ++ EM + G + IT + + + + + T E+ + Sbjct: 177 VIAISNSGESSQVLAVCKEMKKRGVPTIGITNNEDSVVAKECVYHIQTSTREKLFLNEFC 236 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + + ++L++ L + + +RI E L L Sbjct: 237 FSRISAATIIEILYLFLTNA-SDNSYDRISQCEELYASL 274 >UniRef50_C6VMT8 Transcription regulator n=3 Tax=Lactobacillus plantarum RepID=C6VMT8_LACPJ Length = 282 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 68/282 (24%), Positives = 127/282 (45%), Gaps = 8/282 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L I R + +++++K+ Y+L + +S+ +LA GVS ++V +F + L Sbjct: 3 SVLFTIHNRLENFSKAEQKIGRYILDHTNAVIKMSTAELAAATGVSTATVARFGKTLIPD 62 Query: 62 G-FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G +PALKL LS + ++++I D L + KL T + T + Sbjct: 63 GGYPALKLRLSAE-----STVDQTLYDEINPKDSLDAIKSKLALRITHTIDETNRSLDDA 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L ++ + + G+GAS +VA +F K ++IG +D H L + + Sbjct: 118 ALQAASQLIADKASVYVYGLGASNVVATDFEQKFIRIGKAVIHSQDPHLLAVGMTTQRQN 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT--IAEEQATN 238 +LL IS +G + E A+ + V+ ++ + L + A L E Q Sbjct: 178 VVLLLISNSGEKSESIRLANLAHSINVPVIVLSRNATSTLGKLADIILINDDSEENQTAR 237 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +A+ ++ AQ + DLL+ I D E +++ S +K+ Sbjct: 238 AAATTSLMAQLYVVDLLYYTFITNDYERHIKQLVASREAIKE 279 >UniRef50_P0ACS8 HTH-type transcriptional regulator rpiR n=34 Tax=Gammaproteobacteria RepID=RPIR_ECOL6 Length = 296 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 54/273 (19%), Positives = 130/273 (47%), Gaps = 4/273 (1%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 +R + +G+ +++ ++ ++LL + + + + +A VS++ +VK ++ LG+ GF L Sbjct: 20 LRMKQEGMTENESRIVEWLLKPGNLSCAPAIKDVAEALAVSEAMIVKVSKLLGFSGFRNL 79 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 + AL + + + + +++ D+ + V K+ + ++ + +++H Sbjct: 80 RSALEDYFSQSEQ----VLPSELAFDEAPQDVVNKVFNITLRTIMEGQSIVNVDEIHRAA 135 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 AR+ L G G S + + K ++IG A D H ++ + D++L + Sbjct: 136 RFFYQARQRDLYGAGGSNAICADVQHKFLRIGVRCQAYPDAHIMMMSASLLQEGDVVLVV 195 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 +++G ++ A + + G K++ IT + + + A + + + A E + SA Sbjct: 196 THSGRTSDVKAAVELAKKNGAKIICITHSYHSPIAKLADYIICSPAPETPLLGRNASARI 255 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 Q L D F+++ Q ++E A ++ + A+V Sbjct: 256 LQLTLLDAFFVSVAQLNIEQANINMQKTGAIVD 288 >UniRef50_P46117 Uncharacterized HTH-type transcriptional regulator in aarA 3'region n=5 Tax=Enterobacteriaceae RepID=YARA_PROST Length = 282 Score = 177 bits (448), Expect = 5e-43, Method: Composition-based stats. Identities = 60/282 (21%), Positives = 123/282 (43%), Gaps = 4/282 (1%) Query: 1 MN-GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M+ ++ ++++LA +LL D ++ +LA AGVS +SV++F +++G Sbjct: 3 MSTLTSKLESLLNRGKGTEQRLARFLLDSRDNFVAMNVAELAQAAGVSSASVIRFTRQMG 62 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 Y+G+ K+ + + + + + D + K + A+ +L + Sbjct: 63 YRGYSDFKVDYLSD---EKQYKAESLSGSLNPYDDTEQIIAKSGQMFITAIEKSLELLDP 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + E + A+RI+L G+G S +VA + +KL+++ A D+H L+ Sbjct: 120 NTMDEIAQKIVEAKRIVLFGVGTSAIVAYDIFYKLIRVNKYALFSPDLHVQLSYSSNVDA 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DDL++AI+ G ++N + G + +T F + + A L +EQ + Sbjct: 180 DDLVIAITAKGNTPDINHMLKLANKKGCSTIVLTRFGQDEAVRLADLVLPYFYDEQLFQT 239 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 I+ Q ++ D LF + E ++ + +L Sbjct: 240 GVITPQVLQMVVFDTLFFKYLTLTNEDVVLALQKEREAIIQL 281 >UniRef50_C3RHA3 Transcriptional regulator n=3 Tax=Bacteria RepID=C3RHA3_9MOLU Length = 288 Score = 176 bits (447), Expect = 6e-43, Method: Composition-based stats. Identities = 67/275 (24%), Positives = 119/275 (43%), Gaps = 2/275 (0%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 RI+ Y L S+KK+ADY+L LS LA E VSQ +V++F + +GY F Sbjct: 8 RIKTIYNILRPSEKKVADYILNYCGKLEDLSMTLLAKEVAVSQPTVMRFVKAIGYDSFKQ 67 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 KL L++ + + + I DD + + K++ T+ + L S + Sbjct: 68 FKLELAKNYD-KENNIDILYGFSINTDDKIMDLPGKIVATATSMLENALKSLSLVNYQKT 126 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 V ++ ++ I + + S VA + KL+ +G + D + + D L + Sbjct: 127 VALINQSQHISIYAVENSMGVAHDLMTKLIYLGKSVTCHSDYYLQSIDASNLTRDSLAIG 186 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 ISY+G + G + +AI F L + L T ++ A I + Sbjct: 187 ISYSGNSKNTVEVLKIAKDAGAQTIAIVNFENTMLTRYGDIVLSTSNDQFLYGDA-IFSR 245 Query: 246 HAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 AQ L D++++ +I D + +++ H L+K Sbjct: 246 TAQIALVDMIYMGVIISDYDNYTKKLDHYSRLIKH 280 >UniRef50_C7XVK6 6-phospho 3-hexuloisomerase n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XVK6_9LACO Length = 280 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 62/274 (22%), Positives = 132/274 (48%), Gaps = 14/274 (5%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 +++ + L + +KK+A L +P+ R ++ +LAN+AGV ++V +F +++G K F Sbjct: 2 EQVQNLFINLPRQEKKVARVTLQKPELVRRMNITELANQAGVGVATVSRFTKRVGCKNFA 61 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 KLAL P++ + + + +K++ E T+ + S ++L + Sbjct: 62 DFKLALV-----TPDTMQRESEQNVSTPNDIHNYYQKILAE-------TMAMVSTKQLRQ 109 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 ++ A+R+ + GIG+SG AQ FA +LM++G A A+ + + + +D+++ Sbjct: 110 AANLIHGAKRVYVFGIGSSGYNAQEFAQRLMRMGKPAFAMTESNMMTIASATMQDNDIVI 169 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 A+S +G E+ A + + G ++A+T F + L + + + E + I++ Sbjct: 170 ALSVSGSTPEVCSAVRDSRKNGATIIAVTAFKNSLLGKMSDLLFQIKSTELVGDYDFINS 229 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 A + D+L L+Q + + + Sbjct: 230 QFAVTYVIDMLTQMLLQ--FTDFRATMNKTVEAI 261 >UniRef50_B6GAC9 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GAC9_9ACTN Length = 270 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 58/284 (20%), Positives = 117/284 (41%), Gaps = 17/284 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDT-ARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M+ + +I +++ +A ++L + L+ E GV ++++V+F +KLG Sbjct: 1 MSIIGKIESCLPSFTKTETIIARFILDHREDGVEQYLLGDLSRELGVGEATIVRFCRKLG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 GF LK LS + ++ +++ T ++ S Sbjct: 61 LGGFTELKFLLSVENEEHTAARENSG---------------EIKDILISSIKMTDSMVSS 105 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + + + V + +A + GIG SGL A +L + G A+ + HA Sbjct: 106 KDISDVVDLAGAASEVFFFGIGMSGLSASMGESRLFRFGKRTKAITEAHAQNMQASLCDE 165 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 + L++A+S +G +L A G KV+AIT + + L + A + L + + N+ Sbjct: 166 NSLIVAVSISGETIDLIEAVSLAKESGAKVVAITSYLRSTLAELADYVLLSFGKPNYINA 225 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHS-EALVKKLV 282 + S +Q + DL+ + A + +++ K+V Sbjct: 226 GAFSTVVSQLYILDLITSEYALRFSAEAARSKKRIARSIINKMV 269 >UniRef50_B7UNF1 Predicted transcriptional regulator, RpiR family n=11 Tax=Escherichia RepID=B7UNF1_ECO27 Length = 281 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 55/276 (19%), Positives = 113/276 (40%), Gaps = 8/276 (2%) Query: 1 MN---GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQK 57 MN I+ Y L Q++KK+ADY+L + S +L+ ++ S++++V+ +K Sbjct: 1 MNNITVKSLIQSNYPTLHQAEKKVADYILSHAHEVVNYSVTELSEKSHASEATIVRTCKK 60 Query: 58 LGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 LGY+G+ LK+AL++ + + S + + L+K+ + + Sbjct: 61 LGYQGYYHLKIALAKEVINPDNSYPDNTDFT-----DITSLATFLLKKQAEDLIQSTQFF 115 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 + E L + +L + I G S +A A+K ++G + + Sbjct: 116 NAEVLESILKLLANCDTIFFFAAGNSNPLAVYGAYKFSQLGLKTVVHVSPEMQINAAYSM 175 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 DL + IS +G + + G K + IT + + L + ++H L T ++ Sbjct: 176 GKRDLAIGISNSGSTNLMVDIFKVVKERGAKSVCITNYIKSPLSKLSTHQLNTAVSDKIF 235 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRH 273 A S + D+L + + ++ + Sbjct: 236 FEAFDSTRVPAMGVIDMLVLLFMYKNKAHYEKYRTR 271 >UniRef50_D2ELR8 Transcription regulator n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2ELR8_PEDAC Length = 280 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 56/280 (20%), Positives = 123/280 (43%), Gaps = 9/280 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + ++ + + +K++A +++ P +++Q+A++ G S ++V++ A+++ Sbjct: 5 SVVFTLKNQLGDFTKKEKQVARFIIKYPQAVIDSNAKQVADQVGTSAATVIRLAKRVCKN 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G P LK L + +I D L ++ +K+ + T Sbjct: 65 GLPELKERLKNETMVNDKFF-----EEIDPADTLEVMKQKMEYRINHTIEQTNRTVKGGA 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + ++ A + GIGAS LVA + K ++G A +D+H L + S Sbjct: 120 VRNAAKLVDQADVVYTYGIGASHLVADDLQQKFGRLGKPVAQTQDVHLL--AAEMSKGRG 177 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT--IAEEQATNS 239 +++ IS +G +E + V+AIT + L ++++ L E S Sbjct: 178 VVVLISNSGETKETLQLLGAARALDLPVVAITRVLSSPLARQSTVVLAHSDSGEGNQLRS 237 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 A+ ++ AQ + DLL+ + ++ E +++ S ++K Sbjct: 238 AATTSLMAQLYVVDLLYYSFLKLHFEDNVDQLTKSRKIIK 277 >UniRef50_C7HWK5 RpiR family phosphosugar-binding transcriptional regulator n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HWK5_9FIRM Length = 297 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 50/277 (18%), Positives = 118/277 (42%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 I + +++ A+Y L D + + +A E S +S+ KF +KLG+KG Sbjct: 17 LERIILSKKSTFTKTENFYAEYFLKLDDEILNKTISNVAEETESSTASIFKFIKKLGFKG 76 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + +L L+ + + + + +D + K++ N +MY Sbjct: 77 YKDFQLNLATNINKNSDDSLLTAITSVNENDSPDEIANKIMAFNIQSMYTLKEDIKNIPF 136 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 C+ +++ +++I G+G S +A + K ++ + + D H L+ +D Sbjct: 137 ESCLNLIKKSKKIHFFGMGGSATIAYDSYHKFLRTKYMVNYISDSHMQLSACTKMDQNDC 196 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + S++G E+ + + K++A+TG + + + + + + E + S+ Sbjct: 197 IFVFSHSGRTLEVIEVSKVAKKNKAKIIALTGNPKSEMVKISDEAMILPSIESEHGTESL 256 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +A + D+L I+L+ ++E + ++ +K Sbjct: 257 NARILYLTVMDILLISLMYDNVEENKKYMKKRLDALK 293 >UniRef50_D0RS60 RpiR family transcriptional regulator n=2 Tax=Lactobacillales RepID=D0RS60_9STRE Length = 277 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 120/279 (43%), Gaps = 14/279 (5%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L I Y L +KK+ADY L LS+Q ++ VS S+ +FA+K G+ Sbjct: 4 NILPVIESVYGSLTHLEKKIADYFLSAEALTADLSAQAVSQRLYVSVPSLTRFAKKCGFS 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ E+ + R + ++ + + T ++ EE+ Sbjct: 64 GYRQFIFEFQESSSESKNV--------------SRDLTRNVLSDYGELLNKTFSLIDEEQ 109 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 ML +A R+ + G G+SGLVA+ ++ M++G A+ D H + +PD Sbjct: 110 FLRVGDMLNNAGRVYIYGQGSSGLVAREMEFRFMRLGMVCKAITDDHMIRMNRVMLNPDC 169 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++ IS +G + + A +VG K + +T + L+Q+ + ++ + Sbjct: 170 LVIGISISGETKIITQAIQNAKKVGAKTVLVTSNNSDDLRQQCDELVLVAVKKHLAQGNN 229 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 IS ++ D+ + + D + + ++ + +++ Sbjct: 230 ISPQFPVLVVMDIFYAYYMDLDRDHRSQIFTNTLSALEE 268 >UniRef50_Q38V38 Putative transcriptional regulator with a sugarisomerase domain, RpiR family n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Q38V38_LACSS Length = 276 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 57/278 (20%), Positives = 127/278 (45%), Gaps = 9/278 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + I+Q+Y L+ ++K+A ++ + + + + +LA E VS S++ +F +K+G Sbjct: 1 MAIIEHIKQQYSFLSPQEQKVALAVIQKGASIQRIGIDELAAELQVSNSTISRFVRKIGC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + F KL SE + ++ + ++ + + T + Sbjct: 61 QNFVDFKLQFSEGPQPTMTGVQGQVDHESQTSV-------EIYQFYQDVITKTQARIKQA 113 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V+ +++++++ + G+G+SG F +L ++G A V + H +L T + + Sbjct: 114 DLDQLVSWIKTSQQLFIYGLGSSGYTGAEFGQRLTRMGIQATVVTESHMMLMTSRIINKT 173 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++ +S +G E+N A G K AIT T + L + L+ ++ Sbjct: 174 DLVIGLSNSGNTEEVNQAVQNARENGAKTAAITSGTDSPLAAASDLTLFVEDSIGFASAR 233 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +++ A + D+L + L++ E R++ + + Sbjct: 234 FVNSQFALTYVIDILAMLLLED--EQYNWRMKQTVDTI 269 >UniRef50_Q1GCY7 Transcriptional regulator, RpiR family n=2 Tax=Rhodobacteraceae RepID=Q1GCY7_SILST Length = 300 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 62/278 (22%), Positives = 123/278 (44%), Gaps = 5/278 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + +R+ A ++K+AD++ + +++ +LA GVS +VV+F + +G Sbjct: 13 DLISNLRELNGSFAAREQKVADFVSAHLEEISNMTIAELAGAVGVSTPTVVRFCRSMGCD 72 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF KL L++ LA + + +Q + ++++ A + E+ Sbjct: 73 GFREFKLRLAQNLAVSLQYLAP---SQREVPEGGAGAVDQVLGALYATVNVMRQQLVPER 129 Query: 122 LHECVTMLRSARRIILTGI-GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L L +A +I++ G+ G S +VAQ A ++ ++G A ++ D + L Sbjct: 130 LDAAAAALAAAGQIVVAGVGGGSTMVAQEAANRMFRLGIPAVSISDSYLLQMRAATLVKG 189 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+LL +S +G E+ AA G V+AI + L Q A+ + E Sbjct: 190 DVLLLVSASGAADEIVSAAAIAGGYGATVVAI-ARPGSRLAQEATVAIEADLPEDPDILK 248 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++ +A ++ D L +++ Q E +R A + Sbjct: 249 PTASRYAHLVIVDALAMSVAQARTAATTENLRRIRASL 286 >UniRef50_Q03FC5 Transcriptional regulator n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03FC5_PEDPA Length = 280 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 59/281 (20%), Positives = 135/281 (48%), Gaps = 9/281 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L + ++ ++S++K+A +++ P ++++++++ VS ++VV+ A+K+ Sbjct: 3 NILFTLSNDFEKFSRSEQKVARFMIDYPREVIQMNAEEISDRTQVSPATVVRLAKKICKS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G P LK+ ++ + ++ ++ D L ++ KL + A+ T + + Sbjct: 63 GLPGLKIQVASEI-----KVDDSLYTEVNPSDDLDVMKHKLEFRISHAIGQTNQILLKND 117 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + ++ A I + G+GAS LVA++F K ++IG + D H V + P+ Sbjct: 118 VKKATDIVEQADDIYVFGMGASNLVAEDFQQKFIRIGKSVIQTLDTHL--MAVGLAKPNS 175 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT--IAEEQATNS 239 +L+ +S +G +E + ++AIT + + + ++ L E + Sbjct: 176 VLIVVSDSGETKESCHITRVASSLNIPIIAITHERNSTIAKNSTVTLTHDDGGESGVLRT 235 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A+ ++ AQ + DLL+ A + QD R+ S+ ++ + Sbjct: 236 AATTSLLAQLYVVDLLYYAYLTQDFSNNKARLVKSKTIIAE 276 >UniRef50_D1TJG3 Putative transcriptional regulator, RpiR family n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TJG3_9BURK Length = 325 Score = 174 bits (441), Expect = 3e-42, Method: Composition-based stats. Identities = 64/279 (22%), Positives = 116/279 (41%), Gaps = 7/279 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + RI + L +++K+A +L A S LA +A VS ++V +FA+ +G + Sbjct: 40 DIVARIAECAPELRSAERKVAALILDDLTGASRASIGALAQQAEVSIATVTRFAKAVGCR 99 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 LKL L++A A D + ++ E A+ + + Sbjct: 100 DVRELKLRLAQAAAVGQRFLERDAA-----SDAPEPIATRVFDELQTALAHNHQLLRQAP 154 Query: 122 LHECVTMLRSARRIILTGI-GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L E LR+AR I + G+ G S +A ++L+++G A +D S D Sbjct: 155 LAEAAAALRNARMIYVFGMGGGSTALADEMRFRLVRLGRPVATYQDGLLQRMVASTVSRD 214 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +++A+S TG E+ G V+A+T + L + A + +A E Sbjct: 215 CVVVALSTTGRVPEMVENCKIARSYGATVVAVTA-PASPLARLADWLIPIVAFETDFIYK 273 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S+ +A M D+L L + + E +R + + Sbjct: 274 PSSSRYAMMMALDVLVTELAVSQGDESRELLRRMKHALD 312 >UniRef50_C5EPZ9 Transcriptional regulator n=2 Tax=Clostridiales RepID=C5EPZ9_9FIRM Length = 295 Score = 174 bits (441), Expect = 3e-42, Method: Composition-based stats. Identities = 64/289 (22%), Positives = 124/289 (42%), Gaps = 12/289 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 I++ Y L +S++K ADY L +S +A AGVSQ +V++F + LG +G Sbjct: 5 LEYEIKRIYASLRKSEQKAADYYLGYDGPVETMSIAAMARAAGVSQPTVMRFVKALGLEG 64 Query: 63 FPALKLALSEALASQPESPSVPIH-----------NQIRGDDPLRLVGEKLIKENTAAMY 111 F K + +A S +I D V +++ ++ + + Sbjct: 65 FKEFKYQVLKASMGGNGSGMGEEEGGRSEEVLRYGYEISARDRPEEVPGRVVAQSVSYLD 124 Query: 112 ATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL 171 L S + ++ AR+I + + S VA + KLM +GFN D++ Sbjct: 125 DALKHISPSSIGRAAKLICGARQIAVYYVENSASVAGDLVTKLMYLGFNCIMYNDIYLQH 184 Query: 172 ATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI 231 + D+ + ISY+G + + G +AIT F + + A L T Sbjct: 185 ISAGNLDSRDVAIGISYSGSSKNTVDVMKLAKKKGAATIAITNFEHSLIAGHADILLCTS 244 Query: 232 AEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +++ +A I + +Q + D++++ +I +D E++ S ++++ Sbjct: 245 SQQLLYGNA-IFSRMSQTAVVDMIYMGIILRDYGHFTEKLDESSRIIRR 292 >UniRef50_Q1J2N3 Transcriptional regulator, RpiR family n=2 Tax=Deinococcus RepID=Q1J2N3_DEIGD Length = 290 Score = 174 bits (441), Expect = 3e-42, Method: Composition-based stats. Identities = 70/252 (27%), Positives = 116/252 (46%), Gaps = 5/252 (1%) Query: 20 KLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPE 79 ++ D +L+ P+ L+ +L+ AG S ++VV+ Q LG+ G+ KL LS ALA Sbjct: 28 RVIDQILMDPERFLSLTIAELSEAAGTSDATVVRLVQHLGFGGYQEFKLQLSRALAV--- 84 Query: 80 SPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTG 139 S + D + K+ + A+ TL + E V + AR I L G Sbjct: 85 --SRKADLTVEPQDASVTILRKIFDSSNTALDDTLEHLNLEAFSAAVQAMTLARHIELIG 142 Query: 140 IGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAA 199 +GASG+VA + ++ +++G + A D L+T P D+L+A+S++G R ++ AA Sbjct: 143 MGASGVVALSGQYRGLRLGLSCRASTDPGTFLSTCSLLEPTDVLIAVSFSGTRPQVVQAA 202 Query: 200 DEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIAL 259 + G V+A+TG L + H L A ++ Q + D LF +L Sbjct: 203 RLARQAGAIVVALTGLGRTPLSKVVHHTLTVSAPGDRYRPEGLATQIPQVAILDALFTSL 262 Query: 260 IQQDLELAPERI 271 ER+ Sbjct: 263 HVAQDPYLSERL 274 >UniRef50_C0C5Q9 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C5Q9_9CLOT Length = 287 Score = 174 bits (441), Expect = 3e-42, Method: Composition-based stats. Identities = 69/278 (24%), Positives = 135/278 (48%), Gaps = 5/278 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGV-SQSSVVKFAQKLGYKG 62 L +I + Y L + K+LADY+L P + S L + + S++SVVKF + LG+ G Sbjct: 11 LAKISELYPQLTKGQKQLADYILKNPSEVVNKSITDLISHTSLKSEASVVKFYRLLGFDG 70 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F + K+ L++ L ++ S + I DD + +K+ +++ + + + Sbjct: 71 FKSFKIKLAQELVNRTFYHS---ESDITIDDEPTEIKKKVFLGAMSSLSKNAD-IAAGEC 126 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + +L SA+RII+ G GAS + Q ++L ++G N +D H A + P D+ Sbjct: 127 MDAQKLLSSAKRIIILGHGASASICQYAFFRLTELGLNCVCNQDAHMNAAILTHPRPGDV 186 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 +L +S +G +L + + + ITG +++ + + L T++EE+ + ++ Sbjct: 187 ILCVSQSGETADLYKQIEMAYQRRIPAILITGAPGSSIARLSQVILSTVSEERNILTDAL 246 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ +Q L D LF + + R++ + KK Sbjct: 247 NSRVSQFCLIDALFSMISIANANEMLPRLQDTRNTFKK 284 >UniRef50_Q15N75 Transcriptional regulator, RpiR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15N75_PSEA6 Length = 282 Score = 174 bits (440), Expect = 5e-42, Method: Composition-based stats. Identities = 105/281 (37%), Positives = 158/281 (56%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ +I+ L+ S+ KLA ++L + R LSSQ+LAN GVSQSSVVKFAQKLGY Sbjct: 1 MSTFTKIKAIKDTLSNSELKLAKFVLSSSNAVRDLSSQELANVVGVSQSSVVKFAQKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG+PA K L A + +H +I +D + V EKL+ A + T N+N E Sbjct: 61 KGYPAFK--LGVIDALNSTASEGNLHGKITLNDSFKQVSEKLLSSKVAVLTETKNLNEEA 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 H+ V +L+SA+RI++ G+G S LV ++F++KL K+G A DMHA LA S + Sbjct: 119 AFHQAVELLKSAKRILICGLGGSALVGKDFSYKLQKLGMLAIEEPDMHAQLAFAATLSEN 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL+ AIS +G RE+ + + KV+ +T + + A LY++AEE++ + Sbjct: 179 DLVFAISESGSTREIVNVVKQAKQNSCKVITVTRYGATPVSDLADIKLYSVAEEESARLS 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 SI A AQ + D+LFIA+ Q + + + ++V Sbjct: 239 SIMARTAQEFIIDILFIAITQS-SRQGRQLLEKTNSVVSDF 278 >UniRef50_B2UK47 Transcriptional regulator, RpiR family n=5 Tax=Ralstonia RepID=B2UK47_RALPJ Length = 280 Score = 173 bits (439), Expect = 5e-42, Method: Composition-based stats. Identities = 60/232 (25%), Positives = 111/232 (47%), Gaps = 7/232 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + RIR L+ +++++AD++L QP T L +A EAGVSQ +V++F + +G Sbjct: 16 DLRERIRAARPSLSPAERQVADWVLRQPGTVLSLPVAAIAREAGVSQPTVIRFCRSMGCH 75 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G KL L++ A+ + + + +++++ A+ A + Sbjct: 76 GLSDFKLRLAQGNAAHDKPRGAAAPSNVPRSGT------RVLQDTIDALAAMRDRFDPLA 129 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V ++ +A RI L G G+SG+VA++ K + G A A D + + ++ D Sbjct: 130 LDAAVALVDTAHRIDLYGFGSSGVVARDAQTKFFRYGIPANAYSDPYLVSMSLNVLQAGD 189 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE 233 +++AIS +G EL A + + +G V+A+T + L A L + Sbjct: 190 VVIAISKSGALPELQTAVERVRELGVHVIAVTA-PGSPLAALADVVLPADVD 240 >UniRef50_A1HTD9 Transcriptional regulator, RpiR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HTD9_9FIRM Length = 282 Score = 172 bits (437), Expect = 9e-42, Method: Composition-based stats. Identities = 61/278 (21%), Positives = 129/278 (46%), Gaps = 7/278 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I++ Y G++ S KK+A+YLL D A L++++L GVS+++V++FA L YK Sbjct: 4 SLVKNIQEHYHGMSASHKKIAEYLLDHYDKAVFLTAKELGQTLGVSEATVIRFAVALNYK 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L+ AL + + ++ + ++ D + K + + + + T+ + Sbjct: 64 GYPELQQALQDMVKNKITTVERL---RLALLDGQTNLPHKALSTDISNIQLTMEEVTSAD 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V + AR I + + ++ + + L + N+ + + ++ + P D Sbjct: 121 FEKAVNEIIQARNIYIVSLRSATALGYFLHFYLQLLLQNSRLIHGVGTFFEEIRPAGPGD 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++ IS+ R+ G +VLAIT + L + H L +++ + Sbjct: 181 LVIGISFPRYTRQTVEGLKYARENGARVLAITDSLTSPLAPYSHHVLTARSQQISF---- 236 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 I + A L + L +A+ +D + +R EA+ + Sbjct: 237 IDSFAAPLSLINALILAVGARDSAKTADVLRQMEAVWE 274 >UniRef50_C2C459 RpiR family transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C459_LISGR Length = 284 Score = 172 bits (437), Expect = 9e-42, Method: Composition-based stats. Identities = 63/283 (22%), Positives = 121/283 (42%), Gaps = 8/283 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +I+ ++K +ADY+L L+ Q+LA + S +S+++F +KLG G Sbjct: 2 LLQKIKT-MTNFTNTEKVIADYILANTANMEQLTIQELARKTYTSHASIIRFTRKLGLDG 60 Query: 63 FPALKLALSEALASQPESPSV-PIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F + K+ L + + S + DD + + ++++ + + ++ E+K Sbjct: 61 FKSFKIELLKTNQQENHVLSEINPNIPFEHDDSILKISREMMELTQQTITESYHLLDEQK 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + L A+RI L +G S + A++F KL KI A D + +D Sbjct: 121 LFQATRQLYDAKRIFLFALGDSQIRAESFQNKLWKINQYAILATDRSEWAVHTANITSED 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ--ATNS 239 L ISY AA+ + G ++ +T + L + A C+ E Sbjct: 181 CALFISYDAKSPHDITAAEWLKSRGVPIILLTSHITSKLSKIADICIAVPNLEDKSELKI 240 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 A+ ++ A + +++F L Q D E + + L ++ + Sbjct: 241 ATFASQIAFDYILNVIFSTLYQIDYEKN----KDYQTLNQQFL 279 >UniRef50_A8RCR9 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RCR9_9FIRM Length = 289 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 66/283 (23%), Positives = 123/283 (43%), Gaps = 7/283 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RI L++S++KL +Y+L P +S+ L+ +S+ ++++F ++LG++G Sbjct: 6 ILTRIESLMPFLSKSEQKLGNYILTHPKDVTDMSTSALSQACDISEPTLIRFTRRLGFQG 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + KL LS S + + +D + KL ++ +TLN L Sbjct: 66 YKDFKLHLSANFISNQIDSTPVK---VNLNDSAIEIYRKLASFTINSLNSTLNTLDANDL 122 Query: 123 HECVTMLR----SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 + R+I L+G+GAS ++ F K+M++ D+H L Sbjct: 123 ENATNYIYVAAKQNRKIFLSGMGASTVLIHEFQIKMMRLNIQTIFFEDIHLRLEACANLK 182 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 +DL + + G +E D K++ IT F + + ++A LYT E Sbjct: 183 KNDLFICFTTLGASKENYELIDIAHERKAKIIVITQFGNSQIAEKADIALYTSIIENNLR 242 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 AS ++ Q M+ D+LF+ + +D ++ K+L Sbjct: 243 LASQTSIILQSMVIDVLFLTIACKDYASITNSVKDFREKFKQL 285 >UniRef50_B9Y3J7 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3J7_9FIRM Length = 274 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 51/282 (18%), Positives = 109/282 (38%), Gaps = 14/282 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ +I+ Y +S++++A Y L + QLA +A +++VV+F +K+G Sbjct: 1 MSIYSKIKDNYDVFTKSEQRVAKYCLDNYTEVAGNTLSQLAEKAHCGEATVVRFCKKIGN 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + + K L+E Q ++ + ++ T+ E Sbjct: 61 ESYHDFKEELTEE-------------TQEHLKSENDSFVTQIYQNLRTSIEYTIQNLDLE 107 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ E ++ A I G+G SG+ A+ A +L++ G N +D H + Sbjct: 108 QIDEIAQLMNKADIIFCAGVGNSGIPAEACAMRLVRNGKNGIYFKDNHFQSIYLNELKRS 167 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ + S +G + A+ + + K + +T ++L +C+ Sbjct: 168 DIAILFSASGESNDTIHCAEILKQRKVKTVCVTSSVVSSLAVLCDYCILLKRWLGPLGGG 227 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA-LVKKL 281 S+ Q + DLL D + + + ++ K+ Sbjct: 228 SMIGQITQMYIADLLSTRTGMIDQKTTLKAKETTFDYIIDKM 269 >UniRef50_B9E8A7 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E8A7_MACCJ Length = 285 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 124/276 (44%), Gaps = 3/276 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +I + Y +K++AD ++ P+ +L +++A+ + S++++V+F+++LG Sbjct: 3 SVLGQITKMYDSFTPVEKRIADVVIEYPEKVVNLPIKEIAHLSNTSEAAIVRFSKRLGLS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G +K+ L+ L + +I D ++ EK+ A+Y T V S + Sbjct: 63 GIKVVKVELARELH---TIADKKVPTKIELTDDEEVMKEKVFNNTIQALYNTEKVISAKV 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + E + SA+R+++ G+G S +VA + KLM I +A D+ + + + D Sbjct: 120 IDEAAQAITSAKRVMIFGVGNSRVVATDLHVKLMNIDQSAILATDLLSAITLLGHYEAGD 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L S T + + G K++ +T + + A L EE N Sbjct: 180 VLFVTSETSKNKVITDICKYAKEKGIKIILLTQKFSSPAIRMADIVLAMAKEENEINLGY 239 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 ++ AQ + D+L++ + + +++ Sbjct: 240 MTVRTAQLTIVDVLYLRVCAYLKDTVLSNMQNLNET 275 >UniRef50_B1Y2D5 Glucokinase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y2D5_LEPCP Length = 616 Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 62/271 (22%), Positives = 112/271 (41%), Gaps = 5/271 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +R L+ S++ +A LL P S ++A+ GVS +V++F + +G+KG Sbjct: 337 LLDDVRAALPRLSTSERLVAGDLLSAPRAWMSDSIARIADRCGVSTPTVMRFCRTMGFKG 396 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 KL L + + H +R DP ++ + +A+ + + Sbjct: 397 LADFKLRL----GAGLSGSTKVAHRPVRAADPTAERMATILNNSISALIELRDRLHPQAF 452 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V +L +ARRI + G+GA+ L A+ K ++G A D T PDD+ Sbjct: 453 EQAVKLLANARRIEVYGVGAAALAAEEAQHKFGRLGLQVVARTDSQLQNVTAAFLGPDDV 512 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 LL +S +G +N A R G +V+ + + L + + L E + Sbjct: 513 LLVLSNSGAVDPVNEAVMRARRSGTRVIGMCPQR-SDLARLSDVILPVDHPEDLQALVPM 571 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRH 273 + Q ++ D+L L Q + + Sbjct: 572 VSRLMQTVIVDVLVTDLALQRRDHINAALVR 602 >UniRef50_C0X0S9 RpiR family transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X0S9_ENTFA Length = 285 Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 54/285 (18%), Positives = 121/285 (42%), Gaps = 4/285 (1%) Query: 1 MNGLLRIR--QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 MN L I ++ + ++ + D++L + H+S +LA S S++V+ +K Sbjct: 1 MNPLNLIECLEQKERYTYNEGLIIDFILSHTERVLHMSIYELAEATNSSTSTIVRLCKKT 60 Query: 59 GYKGFPALKLALSEALASQPESPSV-PIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 GF K+ LS L ++ + D L+ +K+ + T + +T + Sbjct: 61 ETSGFKEFKIRLSRDLEIHYQAIRNVDANMPFLAQDSDLLIAKKIAQLTTETVQSTQQLL 120 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 +E L++ + +L +A I+ G+ S + +F KL++I + + Sbjct: 121 TEAMLNKSIDLLLTAENILAVGVSNSYIRLTDFQTKLLRIQLFIHLIPYQAEQFYLAINA 180 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQA 236 + +D+ + +SY+G E+ A G ++AIT + L + A+ L E Sbjct: 181 TKNDVAILVSYSGNTAEIVNEARIFAEGGTPIIAITSDLNSQLAKYATVILPIPNVEHAD 240 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++ S+ A + ++L+ + ++ + +++ + K Sbjct: 241 FKVSTFSSQLAIEYILNVLYSCIFSRNFDKNYTSQKNTPTSILKF 285 >UniRef50_B0NJ36 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NJ36_EUBSP Length = 277 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 127/279 (45%), Gaps = 9/279 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I++ Y+ + +++K+AD +L P+ + ++LA +GVS+++VV+ Q GY Sbjct: 5 SVIDNIQKHYREFSPTERKVADCVLRHPNQVTEYTVKELAMASGVSEATVVRMCQHAGYT 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + L+ + + + D+ + + ++ M + + Sbjct: 65 GYWPFRTMLARDMGMMG--------REEKRDNDQANIVAGIFRKYADIMQNLSSKIDLDA 116 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + C ++ + + + G +G +A++ + L +IG A L T+ + +D Sbjct: 117 MSTCARLIDNCHEVHVIAAGDTGTLAKHMGFCLGRIGIKATYSGLADYYLNTINLADEND 176 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L+AIS +G+ + + A+ G KV+AIT + + L + A H L + + + Sbjct: 177 VLIAISKSGITKTVIQGAELAKEKGLKVIAITEYGNSKLGELADHVLLSKGDSSRFDYYK 236 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ + + L + L++ ++ +R E ++ + Sbjct: 237 NYNHLSETAVIEAL-LELVKNVDKIVEKRADQLEFMLSE 274 >UniRef50_Q5WK55 RpiR family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WK55_BACSK Length = 268 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 61/279 (21%), Positives = 130/279 (46%), Gaps = 17/279 (6%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +I+ Y L+ ++K++ADY++ P+ ++ + LA + VS +++ +F +K+G Sbjct: 4 MLQQIQVNYHALSAAEKRIADYVMSAPEELANIHIKDLAAKCSVSVATITRFCRKVGAAN 63 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F K+++ + IR ++ + ++ A + + + +++ + Sbjct: 64 FVEFKMSVR---------------DSIRTEEEGGELIAEMESIYKAIIGGSRELINQDDI 108 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + T+L +A RI + GIG+SGL Q ++LM++G D H ++ + D+ Sbjct: 109 VQAATLLENANRIEIYGIGSSGLSGQEMKFRLMRMGMRVDCHIDSHTMVMNASLLTAADV 168 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 +LAIS +G ++ A G V+ +T L + A L + + + + Sbjct: 169 VLAISNSGHTVDIQEAVALAKENGATVILLTNHEHTPLSEMADLLLLSFSPKPFYARGFL 228 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +A + + DL+ + L Q + E A R R + + +L Sbjct: 229 NAQLSIVHVLDLISLVLAQ-NEERAKAR-RKTLHALSQL 265 >UniRef50_A8UCF8 Phosphosugar-binding transcriptional regulator, RpiR family protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8UCF8_9LACT Length = 283 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 65/279 (23%), Positives = 136/279 (48%), Gaps = 4/279 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L RI+ L S++K+ +Y+L P+ +++ QL A + ++V++ ++G Sbjct: 5 NILGRIKSVLDDLPNSERKIGEYILTYPEETIKMTTSQLGIAAESNSTAVIRLCNRIGVN 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ LS + S + +I ++ + + KL+ +M T+++ +E Sbjct: 65 GFTKLKVNLSAEIV----SVDESGYAEIEAEETIGTIKNKLLTNAFKSMEETISLMNEFD 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + ++ SA + + G+G S ++A+N K ++G D H L++ + A+ + Sbjct: 121 IERVIELIESASMVYVYGVGNSRIIAENMVQKWSRVGKIVICPTDNHQLVSMLGAAPKNA 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L IS +G RE+ + K + +T F N+L +A + + T+ ++ + Sbjct: 181 LFFGISNSGETREIIELIKLAKKCSLKTVGLTQFGQNSLTNKADYTIQTVKTIESDSQFI 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 S+ HAQ + D+LF + + ++ ERI+ S + + Sbjct: 241 SSSLHAQLIAIDVLFYSFLSKNYVAGTERIKQSREEMNQ 279 >UniRef50_B9Y4T6 Putative uncharacterized protein n=2 Tax=Holdemania filiformis DSM 12042 RepID=B9Y4T6_9FIRM Length = 277 Score = 171 bits (433), Expect = 2e-41, Method: Composition-based stats. Identities = 71/275 (25%), Positives = 132/275 (48%), Gaps = 6/275 (2%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 +++Q L Q++K +AD+ AR +S QLA+ + QS++++F++KLGY+ F Sbjct: 4 EKLKQVQNELTQTEKIIADFFQNHSLEARSFTSYQLADRLNIGQSTIIRFSKKLGYRSFR 63 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 L LS + +I ++ +K+I++ TL N + + + Sbjct: 64 ELLEDLS------TSLTEEKVKEEIVVNEGTSSTNQKIIQQYQKMAQLTLEFNPPQVIDQ 117 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 V+ L+ AR+II+ G G S L A+ + + +K+G ++ + H + + + P D+L Sbjct: 118 TVSALKKARKIIVFGFGNSNLFAEYISNQWLKMGLDSFCSANSHIIFSMLSQFGPQDVLF 177 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 IS +G E+ AA V+A+T N L + L T+ E T +++ Sbjct: 178 LISESGETPEILKAARIAGHQNVTVIAMTRIQKNRLHGYSDIVLKTVNYETNTRLNAMTL 237 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +Q L D++++ L + D E + I SE L+ Sbjct: 238 RCSQLCLLDMIYLNLYKTDFEHYEKIIAESEKLLD 272 >UniRef50_UPI00016945F6 hypothetical protein Plarl_13824 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI00016945F6 Length = 248 Score = 171 bits (433), Expect = 2e-41, Method: Composition-based stats. Identities = 65/240 (27%), Positives = 125/240 (52%) Query: 40 LANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVG 99 LA A VS++++V+ ++ L KG+ LKL ++ LA S + +I D + + Sbjct: 3 LAELAEVSEATIVRLSRSLNLKGYQELKLRIAADLAQSLNSNLAESYQEIHMDASSQSLV 62 Query: 100 EKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF 159 E + N ++ T++V + ++L + +L AR+I L GIGAS ++AQ+F KL +I Sbjct: 63 ESISHNNMRSIQDTMSVLNIKELDRAIEVLGGARKITLFGIGASAVIAQDFKQKLTRINR 122 Query: 160 NAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNA 219 A D + D +L ISY+G +++ LA G ++++T F N Sbjct: 123 WCEAAYDFDSQATLAANLQEKDAVLGISYSGNTQDILLAMQAAKERGATLISLTKFGHNP 182 Query: 220 LQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + ++A L+T + E++ S ++++ AQ + D+L++ + +Q+ E + ++ VK Sbjct: 183 VAEQAHIRLFTSSLEKSIRSGAMASRIAQLNVIDILYVGIARQNYEENILALENTRKAVK 242 >UniRef50_A9BEU1 Transcriptional regulator, RpiR family n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BEU1_PETMO Length = 269 Score = 171 bits (433), Expect = 3e-41, Method: Composition-based stats. Identities = 54/267 (20%), Positives = 115/267 (43%), Gaps = 12/267 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +I+ Y L +K+ A Y++ +P H S +L+N AG S++++ + +K+GY G Sbjct: 2 VTSKIKGIYNSLTNKEKQAAQYIIERPGDVIHYSITELSNWAGTSETTIYRVLKKVGYSG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + KL L+ + + + + + A+ L +K+ Sbjct: 62 YQKFKLELARE-----------LSTPTLDSKESKDLFDMIYNRTVNALTDILRQVDRDKI 110 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 ++ ++++++ +G S +A + + K +GF + A D H + DD+ Sbjct: 111 THASEIIMNSKKLLFYAVGRSFPIALDASLKFAALGFASTAYSDPHMQVIVASNLEKDDV 170 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++AIS++GV R+ +A G + +T + L + + LYT A E S Sbjct: 171 VIAISHSGVIRDTYKSAQVAKEAGAFTIGMTAGVNSPLSKIVNLVLYTSA-EMPQESEFT 229 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPE 269 + + + +LL+ ++ + E Sbjct: 230 VSRIGEMFMVELLYNSVASKMSLKNKE 256 >UniRef50_C4KYQ0 Transcriptional regulator, RpiR family n=1 Tax=Exiguobacterium sp. AT1b RepID=C4KYQ0_EXISA Length = 267 Score = 171 bits (433), Expect = 3e-41, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 115/277 (41%), Gaps = 17/277 (6%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 +I+ Y + S+KK+ADYL+ + A ++ LAN S ++ +F +K+G + Sbjct: 3 EQIKHVYSEMTGSEKKIADYLMANMNEAIEMNITDLANAIATSPGTITRFCKKIGVGSYS 62 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 +LKL + + L + + + + T ++ +++L Sbjct: 63 SLKLMMQKTLTETNLPQTTSLEPMQ--------------RSYIELIQTTAHLIDQDELLA 108 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 + S+R + L G+G +GLVAQ ++L ++G A D H+++ + +D+++ Sbjct: 109 ICKEITSSRSVHLYGLGNAGLVAQEMEYRLRRMGLLATTAFDSHSMVMDASIVTSEDVVI 168 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 A S +G RE+ A G +A G+ + L + + L T I+ Sbjct: 169 AFSNSGESREVVQAMQLAKESGCTTVAFVGYQHSPLAELVDYRLLTAGASGEAFL--INT 226 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 D + L++ + E + + +L Sbjct: 227 QLPLLFTADAVTKTLMETN-EALKAHYLQTLKALDRL 262 >UniRef50_Q041H9 Transcriptional regulator n=22 Tax=Lactobacillus RepID=Q041H9_LACGA Length = 279 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 123/279 (44%), Gaps = 7/279 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + +I + ++ SD+K+ +L P +++ QLA A VS +S+ +F + L Sbjct: 3 NIIDKIYAQMSSMSTSDQKVGRTILKNPAVVINITISQLAKRANVSDASITRFCRNLSLS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ L++ + + + D ++ ++ K ++ATL+ EK Sbjct: 63 GFHELKILLAQCIGQKESESLKKL-----PKDDMQAALGEIEKNKVGEIHATLSQIPTEK 117 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASSPD 180 L + ++++ ++R I ++ G + VA + +K +IG + A A Sbjct: 118 LEKILSIIEASRVIQISAEGDTYPVAADAVYKFNQIGLLSFASGGNVETADAQTMNLGRK 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D L+ IS +G L + KV++IT + + + + L T + + Sbjct: 178 DCLIVISNSGESAALLKEIKLAHKNKLKVISITNNPASPIALASDYHLKTGVRQTILQNQ 237 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + A + + LF+ LI+++ + E I+ E +V Sbjct: 238 YYFSRVAAFTIIEALFLLLIKRNEKR-IENIKQHEKIVS 275 >UniRef50_C3RI81 Sugar isomerase n=1 Tax=Mollicutes bacterium D7 RepID=C3RI81_9MOLU Length = 296 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 116/283 (40%), Gaps = 3/283 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + ++ + ++ ++ +A ++L S++ +A S ++V++ +KL + Sbjct: 1 MLIIEKLN-LKEKMSDGEESIAAFILTLGKELHKYSTRNIAEATLTSPATVIRLCKKLDF 59 Query: 61 KGFPALK-LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 KGF K L E + V + +D + K+ + T+ + Sbjct: 60 KGFDDFKEQFLKEINYLDQQYGKVDANFPFNRNDTMMKTAHKISHLYEDTVTDTMTLLHH 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L + + +L+++ I + G + +A++F K++KIG N +++ L V Sbjct: 120 DDLQKALRLLKNSNSIHIFSTGTALNLAESFKEKMLKIGKNVVISNNLNYQLYEVSCIPK 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-N 238 D+ + ISY+G A ++AIT F N L + AS L +E N Sbjct: 180 GDIAIIISYSGETINTIKIAQTCKNNKIPIIAITSFGENTLAKLASCKLTISTKESLYHN 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S A ++ D+L+ +D + + ++ L Sbjct: 240 LGDFSTHLATHLMLDILYSVFFLEDYDQNYDNKIKITKDLEAL 282 >UniRef50_C9XPJ9 RpiR-family transcriptional regulator n=5 Tax=Clostridium difficile RepID=C9XPJ9_CLODC Length = 250 Score = 170 bits (431), Expect = 4e-41, Method: Composition-based stats. Identities = 54/263 (20%), Positives = 109/263 (41%), Gaps = 15/263 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + ++ + L+ ++ L +Y L + + +ANE S + +V+F QKLG+ Sbjct: 1 MNLIDKLDINQKKLSTNEISLLNYFLKNSEKINQKKIKDIANETFNSTAYIVRFCQKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ K L S S + ++ T N+ + E Sbjct: 61 SGYSEFKNFLV-------FSYSNRNERNKEFTKSQSDIFTDVMD--------TQNLINVE 105 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + C+ + +++ I G+G+S LV + + IG N D + + D Sbjct: 106 NIDMCLNEIHNSKHIYFFGVGSSRLVCTEMSQRFSAIGVNVKYYDDSTLMYLAASNITKD 165 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++A+S +G ++ A + KV+++T + N+L A L+ + + NS Sbjct: 166 DLVIAVSMSGETAQVIKACNIAKTNQVKVISLTNISVNSLSNIADIKLFVSSPQYNFNSV 225 Query: 241 SISACHAQGMLTDLLFIALIQQD 263 + ++ L + +F I++ Sbjct: 226 NYTSRVPALSLMEYMFHKYIEKY 248 >UniRef50_C0XD02 RpiR family transcriptional regulator n=1 Tax=Lactobacillus gasseri JV-V03 RepID=C0XD02_9LACO Length = 294 Score = 170 bits (431), Expect = 5e-41, Method: Composition-based stats. Identities = 62/282 (21%), Positives = 115/282 (40%), Gaps = 3/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M ++R++ ++ ++K +A+YLL + + + +A + S S++++ KLG+ Sbjct: 1 MLIKDQLREKK-NMSNNEKIVANYLLKADENIEKDTVRTVAEKTYTSPSTIIRLCHKLGF 59 Query: 61 KGFPALKLA-LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 GF K L+E + +V ++ R +D R V K+ + T V Sbjct: 60 TGFSDFKNKFLNEVKYFNLQFQNVDVNFPFRREDTAREVMSKITDLYIETIKDTEKVVDM 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 L C + + I + G A +F K+MKIG +++ L + Sbjct: 120 RTLLRCRKICSESEEIHIFSYGTYLNQAYSFKEKMMKIGKKVMISSNLNYQLYEAEIMQA 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-N 238 D+ + ISY+G L A + + +AIT N L + LY +E N Sbjct: 180 GDIAIIISYSGETNNSLLIAKQCRKNNIPTIAITSIGENDLTKICDETLYISTKESLYKN 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 S + + D+L+ + Q D E E + ++K Sbjct: 240 IGDYSIHLSVSYVLDVLYSLIFQNDFEHFYETKMNLAMSLEK 281 >UniRef50_B7IEI4 Transcriptional regulator, RpiR family n=1 Tax=Thermosipho africanus TCF52B RepID=B7IEI4_THEAB Length = 290 Score = 170 bits (431), Expect = 5e-41, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 118/277 (42%), Gaps = 16/277 (5%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + +++ Y L +++K+A Y++ PD H S +L+ A V ++++ + ++KLGYKG Sbjct: 19 IIEKLKAIYDQLKPAERKIARYIINYPDDVIHHSISELSELAKVGEATISRISRKLGYKG 78 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F ALK+ L++ + +I E ++ + +E ++ Sbjct: 79 FQALKIELAKE---------------LSSISFEETKTNSVISEVIESLNKLSKIINENEI 123 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 ++ + + +I G+G+SG+VA+ A + GF A D H + + + Sbjct: 124 NQIAKKVVESNKIFFFGVGSSGVVAEYGALLFTRGGFFANYYNDPHMQVISAAGMDNQTV 183 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + IS +G R+ + +AITG + + + +Y I Sbjct: 184 VFGISSSGNIRDTVKSMKVAKDSKAFTVAITGGYESKITEVVDKTIYIPPAGLERGMPKI 243 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S +Q + ++F ++ + A E I+ + +K Sbjct: 244 SPIVSQISILHMIFEEVLS-LKKEAIEIIKKANTTLK 279 >UniRef50_A6UGP6 Transcriptional regulator, RpiR family n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6UGP6_SINMW Length = 284 Score = 170 bits (430), Expect = 5e-41, Method: Composition-based stats. Identities = 71/274 (25%), Positives = 130/274 (47%), Gaps = 8/274 (2%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 R+R L+ +++++A ++L D + S +A VS ++V++ + G++GF Sbjct: 14 SRLRSVLPKLSDAERRVALWMLKNVDLSIRQSMSAIAQATDVSDTTVLRMCRTAGFEGFT 73 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 LKLAL++ H+ + +L + T A+ T V E + Sbjct: 74 DLKLALAQE------PREAIEHSSGEPEASALQAAGRLFRAITQALNDTFGVLDEATFAK 127 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 + ++ +A+ I++ G+G SG+VAQ F + +++G A D + + P DL++ Sbjct: 128 ALDLVANAKHIMVGGVGGSGIVAQAFYQRCIRLGLRCDAPIDSQLQIMHAALTGPGDLVV 187 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 AISY+G+ + L E G L ITG + +AL + A L +++ EQ S ++A Sbjct: 188 AISYSGITSDPVLVLQEAKARGASTLCITGNSSSALARLADVVLVSVSHEQ--GSEPMAA 245 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 AQ L D L+ AL+ ++ E A + Sbjct: 246 QIAQMTLVDALYAALVARNPEPAQLTEERMVNAI 279 >UniRef50_A4E6N7 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6N7_9ACTN Length = 301 Score = 169 bits (429), Expect = 8e-41, Method: Composition-based stats. Identities = 61/277 (22%), Positives = 124/277 (44%), Gaps = 7/277 (2%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L I QG ++S++++ DY+L A L++ QL+ A S+++V +F +KLG+ F Sbjct: 25 LSLISTH-QGYSESEQRIVDYILEHQSEAPRLTAAQLSRAAATSEATVSRFCRKLGFGSF 83 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 + + +L+ L SQ D + + ++ + + AT++ + L Sbjct: 84 RSFQFSLARDLESQRNEGL----TDEVSLDNMEQSLKNILAAKVSELNATIDGIDHDTLA 139 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 V L+ A I +G + VA + +K ++G A + P D++ Sbjct: 140 AVVHALKHAGVIEFAAVGNTNAVALDATFKFSQLGLRCMASTISETSIGFALTLRPGDVI 199 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + IS +G R LN A G V+ I+ + + L + A + T+ E + + Sbjct: 200 VLISNSGKSRRLNRMAKAARNCGATVVVISSDSKSPLARLADYTFNTVNHEALLTTGDFA 259 Query: 244 -ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + + M+ ++++ L+ + + A E I + E L++ Sbjct: 260 FSKISATMIIEVIYNFLLPEIKD-AREHISYYEELIQ 295 >UniRef50_A8U5E8 Putative uncharacterized protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8U5E8_9LACT Length = 268 Score = 169 bits (428), Expect = 9e-41, Method: Composition-based stats. Identities = 55/278 (19%), Positives = 115/278 (41%), Gaps = 17/278 (6%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + RI Q Y L++ +K++A ++L + + L+ S +++ +F KL Y+ Sbjct: 6 DLSNRINQNYSLLSKKEKQVAAFILEHKKDIESWNIKDLSRLTETSNATISRFCAKLSYR 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F K +++ L+ P VP+ K+ T +++ + ++ Sbjct: 66 NFNEFKTFVTQELSGNPTPLQVPV---------------KIASYYTQLIHSASQLIETKQ 110 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 +++ V + + +I++ G+G SGL A ++L+++G V D H +L D Sbjct: 111 INDFVEAIHLSNKILICGVGNSGLSAMELKYRLVRMGLIVDVVTDPHMMLMDAVLLKKYD 170 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++AIS G + + A + V IT L + A L+ + Sbjct: 171 LMIAISNYGQTQAVIDACTIAKKEDATVFVITNQNHTPLTKIADQVLFASGRTSIPDEQF 230 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 I++ + D+L L++ + E R + + Sbjct: 231 INSQLPIHFILDVLCYVLLEN--KSYKENRRKTLTAID 266 >UniRef50_A9IGF4 Transcriptional regulator, RpiR family n=10 Tax=Proteobacteria RepID=A9IGF4_BORPD Length = 307 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 63/280 (22%), Positives = 122/280 (43%), Gaps = 9/280 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + +IR R L+ +++K+AD +L A + QLA++AGVS +++ +FA+ +G Sbjct: 24 DIVYQIRSRRDALSATERKVADAILDDIAAAAGATVDQLADKAGVSIATISRFARSVGCD 83 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 LKL L++A A + +L + A + A L SE Sbjct: 84 DTRDLKLKLAQASAVGERFLDPSTPEE-------STFYARLYADIEATLRAHLPRFSEAL 136 Query: 122 LHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + ++R AR + G+G S +++Q +L+++G+ AA D L Sbjct: 137 FEQAAGIVREARMTYVFGMGGASAVLSQELQSRLVRLGYAVAAYSDAVLLRMVAATLDER 196 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ +S +G+ E+ + + G +++ +T + L A L E Sbjct: 197 DVVVVLSTSGLTPEILAGTRIVKQYGARIVTLTD-PASPLAGLADVVLPIHTAETDFIYK 255 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 S+ +A + D+L L E ER+R + + + Sbjct: 256 PSSSRYAMLLAIDILATELALARQEATQERLRRIKLALDE 295 >UniRef50_C2KAY2 Transcriptional regulator n=6 Tax=Lactobacillus RepID=C2KAY2_9LACO Length = 281 Score = 169 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 72/280 (25%), Positives = 137/280 (48%), Gaps = 3/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N +I Y L ++ K +AD +P + + Q+L S +SVV+F + LG+K Sbjct: 3 NLANKISDVYPNLNKTSKLIADVYFKEPRIFLNKNLQELGTITQTSGASVVRFCRNLGFK 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF ++A ++ + ++ + I +D V KL + + Sbjct: 63 GFKDFQIACAQEMPNKQ---DAMVDTIINTNDEPTSVLYKLQLSLGKNIADIGKTIDHKS 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V ++RSA++I + G GASGL AQ+ +KL++ G N V+ H L V + +D Sbjct: 120 LDAAVDLMRSAQQIYVAGEGASGLAAQDLFYKLIRSGKNVNFVQSSHIALEQVANINKED 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L+ SY+G+ +E L A + + K++A+T + L+ A + + E+ + Sbjct: 180 ILIVFSYSGLTQEPLLMAKQAQKNNAKIVAVTRIQDSPLKNMADTVITLPSNEKLLRYGA 239 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 I++ A+ + LL+++LI +LE +++ ++ L +L Sbjct: 240 INSLFAEIFASSLLYLSLISPNLEELNMKMKTTQNLTNQL 279 >UniRef50_Q03HW7 Transcriptional regulator n=13 Tax=Lactobacillales RepID=Q03HW7_PEDPA Length = 295 Score = 169 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 55/282 (19%), Positives = 121/282 (42%), Gaps = 3/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + ++ ++ +++++ADY+L ++ +L+ S S+VV+ +KLG+ Sbjct: 1 MLLIDKL-SNHENFTNTEQRIADYILKNITDIPPMNIDKLSKVTYTSHSAVVRLTKKLGF 59 Query: 61 KGFPALKLALSEALASQPESPSV-PIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 +GF K+A+SEA+ SQ + + + +D + + +K+ + + ++ T E Sbjct: 60 EGFKDFKVAISEAVYSQTTNMNSVDANFPFDSNDSVSTISKKVAELSVESIQRTFAQLDE 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + E + + RI L G S + A++F KL+K+ A + T + Sbjct: 120 RLIEEAANTIAKSERIFLFAQGDSQIRARSFQNKLVKLNRFAILGEEYSDEDWTAANLTK 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-N 238 D + ISY G + + +TG + L + A + T E Sbjct: 180 KDCAIFISYGGRISQYERMLTHFSENKIPSVVLTGNQKSPLIRLAQTAIVTTQNEYDFLK 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ S+ L D +F + ++ + +++ L+++ Sbjct: 240 ISTFSSQITFEYLLDTIFSVIYAKEYQQNIINLKNKFNLIQR 281 >UniRef50_A8S4W0 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S4W0_9CLOT Length = 283 Score = 169 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 55/280 (19%), Positives = 109/280 (38%), Gaps = 6/280 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + I +RY+ L +S K +AD+LL + ++A+ G+S +S+++F++ +GYK Sbjct: 3 NIIDEINKRYENLTKSQKIIADFLLENYALVPFETLNEIAHRIGLSTTSLIRFSRTMGYK 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + LK + + + + PS + + + ATL + EK Sbjct: 63 DYTDLKKNIQDLIKVKVSLPSRFGE-LSEQGGTPNDLLLRCRDIAVNNIEATLRLQDTEK 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASSPD 180 L V + SA + G+ A A L +I ++ + + Sbjct: 122 LDLAVDWISSANHNYVLGLRTCFSPAFYLAVVLSQIKKKVRLIQGIASTYPEEITDVEEG 181 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ S+ +E A M R G KV+ ITG ++ + A + Sbjct: 182 DVCTVFSFPRFYKETVNIAHFMRRRGAKVIIITGKDIRPVKPYGDIIIPCSAVGPSFKD- 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + A L D + ++ ++ + E + E ++ + Sbjct: 241 ---SYVAVHFLIDYIISSIAAKNKDEGIEVVSKIEEILSQ 277 >UniRef50_Q1J381 Transcriptional regulator, RpiR family n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1J381_DEIGD Length = 286 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 55/251 (21%), Positives = 104/251 (41%), Gaps = 12/251 (4%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L R+ L + +++A Y++ P+ + + +LA AGV +S+V + ++LG+ GF Sbjct: 20 LARLHAERAQLPPTLERIAAYVVAHPEEVIYQTITELAATAGVVESAVTRLCRRLGFSGF 79 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 A K+ALS ++ + + ++ A+ T V L Sbjct: 80 HAFKIALSGDVSQAQGAAEATDPFSVA------------ARQAVQAIEGTRQVADPAALE 127 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 + +A R+ + G SGL AQ A KL ++G A A D H SP ++ Sbjct: 128 RVAQAIAAATRVDVVGQSNSGLSAQFLANKLARVGVPAFAYTDPHLAAVAAATQSPRGVV 187 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + + +G + G +A+T + + + A L T + E ++S Sbjct: 188 VGFTRSGSTIDTVQTLRLAASKGACTVAVTHRASSPVTRYAREVLATSSPESPLAGGALS 247 Query: 244 ACHAQGMLTDL 254 + +Q +L + Sbjct: 248 SLVSQVLLVEA 258 >UniRef50_UPI000196B715 hypothetical protein CATMIT_00151 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B715 Length = 282 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 120/277 (43%), Gaps = 3/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + I Y S+KK+A Y++ +++ L+ +G S++SV +F +++G K Sbjct: 4 NVIDEIYSSYDHFFDSEKKIAKYIMHHTSEVVNMTVGDLSQASGASEASVSRFCKRIGLK 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK++L++ L P + + + + ++ + T+ + K Sbjct: 64 GFHHLKISLAQELVEIPSCNTTISNRISIT--DVNNSLDSILANKVEELTQTITMMKSNK 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L E + + +R I +G + VA + +K +IG ++ + L + S +D Sbjct: 122 LDEILDCILKSRHIYFVAVGNTVPVALDGCFKFNQIGIPSSTSSILETELGMILNVSKED 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++AIS +G + A E L+IT +++ + + + T E+ Sbjct: 182 MVIAISNSGESSGVLTAIKEAHNQKATTLSITNSDKSSIALESDYHITTATREKVYLEGY 241 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + + + ++L++ L E A E+ E L+ Sbjct: 242 CFSRVSATAVIEILYLFLTT-MKEDAHEKSAQHEDLI 277 >UniRef50_UPI00019054B9 hypothetical protein RetlB5_21050 n=1 Tax=Rhizobium etli Brasil 5 RepID=UPI00019054B9 Length = 259 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 67/267 (25%), Positives = 123/267 (46%), Gaps = 10/267 (3%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 + ++ +K+A ++L P T + S +LA EA S++SV++F ++LGY+GF KLAL+ Sbjct: 1 MTRALEKVAAFVLADPQTVLYKSITELAEEAESSEASVIRFCRELGYQGFQNFKLALAHE 60 Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR 133 LA+ + + + ++L++ A+ T + + + ++L AR Sbjct: 61 LATLQQPTASA----------PGDMVQELVETARTALEETERLLDRDAIQRVSSLLLDAR 110 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRR 193 I + G+ AS + AQ +KL ++G A RD H +S DDL + IS +G Sbjct: 111 HIEIFGVAASAITAQYLEYKLARLGIQAHIPRDSHLATMASATASADDLYILISSSGSTI 170 Query: 194 ELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTD 253 + A+ G KV+AIT T + L L + E + + +Q ++ D Sbjct: 171 DTLRVAESAHARGAKVIAITNRTKSPLAAICDFKLLASSPETPLTGGAFPSKISQLLIVD 230 Query: 254 LLFIALIQQDLELAPERIRHSEALVKK 280 L + + D +E++ + Sbjct: 231 ALANTITKLDPARLKTIKETAESVSDR 257 >UniRef50_C2L0R5 Possible transcriptional regulator RpiR n=1 Tax=Oribacterium sinus F0268 RepID=C2L0R5_9FIRM Length = 314 Score = 167 bits (423), Expect = 4e-40, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 116/283 (40%), Gaps = 5/283 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I+ Y + ++ +K+ADYL+ D + +LA +GVS +SV +F + +GYK Sbjct: 27 SVIPEIKSLYPQMNEAMQKIADYLIDTEDKKCVERASELARRSGVSTASVSRFVKMMGYK 86 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRG-DDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F +L + + ++ + + + ++ + T + + Sbjct: 87 EFRDFRLKIVMEKQEENRQEENELNYNGEPITGDAHSICKTIFSKSVRELEETWGILDFD 146 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + ++ ARRI++ G+G S + + +L +IG+ D H ++ Sbjct: 147 TMQTVADLIHEARRIVVIGVGRSKVTMEALYSRLYRIGYPIMMFSDAHEIVNITSIMEKK 206 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L+ +S G + + A + G +V+ I+ + L + + + L++ + Sbjct: 207 DILICVSNFGQSKSVVEGARRAKKRGIQVVGISSIKESPLAKISDYTLFSAYDYNNAQDG 266 Query: 241 ----SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S AQ ++ D L++ + ++ + + Sbjct: 267 NLFDPSSENLAQLVIVDCLYMLVAHKNKRKNITYFKTFSNEIH 309 >UniRef50_C7T7Y4 Transcriptional regulator n=8 Tax=Lactobacillus RepID=C7T7Y4_LACRG Length = 315 Score = 167 bits (423), Expect = 4e-40, Method: Composition-based stats. Identities = 72/282 (25%), Positives = 136/282 (48%), Gaps = 4/282 (1%) Query: 1 MN-GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M L +++ + L+ ++ LADY+L + ++ Q+A +GVS +SV++F + Sbjct: 1 MKALLAKVQAQLPQLSPVNRALADYVLTDAEAFIAQTTAQIARASGVSAASVIRFVRLFD 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 Y + KLAL P+ ++ DD L + KL + AA+ + + Sbjct: 61 YPDLQSFKLALVRD---TQAPALTPLDPLVQDDDDLPTMMRKLSQTAIAAVRDLPDELDQ 117 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + +T LR AR I L G+ AS LVAQ+ KL++ G+ A D H L V ++ Sbjct: 118 AAVQTAITTLRHARHIYLVGMSASALVAQDLYLKLIRAGYLAIFDADAHTALERVYYTTA 177 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D ++ SY+G+ +E+ LAA + R V+ +T P+ L+ AS + E Sbjct: 178 ADAVVVFSYSGLTKEVVLAAQQARRNQTPVIVVTRAEPSPLRDAASCVIALPPTEPLLRI 237 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++++ + + ++LF+ ++ +++ + R + L +L Sbjct: 238 GAVTSMFTETYVANILFLGVVHGEIKQTEQNYRATSQLTGEL 279 >UniRef50_C4F999 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F999_9ACTN Length = 288 Score = 167 bits (422), Expect = 5e-40, Method: Composition-based stats. Identities = 57/286 (19%), Positives = 119/286 (41%), Gaps = 11/286 (3%) Query: 1 MNGLLRIRQRYQ------GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKF 54 M+ + + S++ + D++L + A ++S QLA + S++SV +F Sbjct: 1 MSTITELPSALPLITSSRQFLDSEQHIVDFILANTERAPQMTSAQLARASSTSEASVSRF 60 Query: 55 AQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATL 114 +KLG+K + + + +L+ LA++ V + D + + + ATL Sbjct: 61 CKKLGFKNYRSFQFSLARDLAAREGDERVTGEVTL---DDIEQSLANIKHAKQREIEATL 117 Query: 115 NVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATV 174 + + L V + R A ++ +G + VA + A K ++G A + + Sbjct: 118 DALDPDTLRRVVDLFRRAGLVMFAAVGNTNAVAIDAAIKFGQLGIRCVANTITESSTSLA 177 Query: 175 QASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE 234 DD+L+ +S +G + L G V+ I G L + A L T+ E Sbjct: 178 LTMGKDDVLVLVSNSGKSQRLERILRAAKHGGATVILICGNENAPLARLADIVLRTVNYE 237 Query: 235 QATNSASIS-ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + + + + ++ ++++ L+ A +RI E L++ Sbjct: 238 ALLTTVDFTFSKISATLIIEVIYSFLLSVMP-GARDRISGYEELIQ 282 >UniRef50_A9WVK2 Transcriptional regulator, RpiR family n=2 Tax=Micrococcineae RepID=A9WVK2_RENSM Length = 346 Score = 167 bits (422), Expect = 5e-40, Method: Composition-based stats. Identities = 54/248 (21%), Positives = 107/248 (43%), Gaps = 2/248 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + R++ + ++ + K+A YL+ +P LS ++LA+E G S ++V +F + +GY G Sbjct: 37 VVNRLKAQLPEMSGAMSKIARYLIEKPLAPLELSIKELADETGTSAATVTRFCRLIGYTG 96 Query: 63 FPALKLALSEA--LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + ++ ++ + ES I DD R V L+ + ++ T V Sbjct: 97 YAPFRVGVASDLGRSDARESWKTDIGRAFGPDDSPRDVLSTLMNAHARSLQETAAVLDLR 156 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + + + + GIG S ++A+ +L +IG +++A L + + Sbjct: 157 LMKNLARRIALSEHVDIYGIGGSAVMAKELQNRLYRIGIPCHHCTEVYAGLTSASLQNSQ 216 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 + + IS TG E + G +A++ + L + A + T EQ Sbjct: 217 CIAIGISNTGRTEETIQMLRQAGLAGATTVALSNNPNSTLAESADFQITTSVHEQFLQPD 276 Query: 241 SISACHAQ 248 +SA H Q Sbjct: 277 DLSAKHVQ 284 >UniRef50_C9A857 Transcription regulator n=3 Tax=Enterococcus casseliflavus RepID=C9A857_ENTCA Length = 297 Score = 167 bits (422), Expect = 5e-40, Method: Composition-based stats. Identities = 64/281 (22%), Positives = 126/281 (44%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M ++R +GL ++K++ADY+L + L+ + +A S SSV++ A+K+GY Sbjct: 1 MLLGDKLR-LQEGLTNTEKRIADYILQNINDVPSLTIEVIAKHTYTSHSSVIRLAKKMGY 59 Query: 61 KGFPALKLALSEALASQPESPS-VPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 +GF + +L L+E +Q +P+ V + D + +K+ +++ T + Sbjct: 60 EGFKSFRLGLAEIAHNQMFNPTFVDANFPFSPKDQTPDILKKMADLTINSIHKTHAQVAP 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E + V L +A+RI L G S + A++F KL+KI + + Sbjct: 120 EMMEAVVQSLEAAQRIFLFARGDSQIRARSFQNKLVKINKYLILADEYGDDAWNASNVTQ 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-N 238 +D + I+Y G + VG V+ I+G + A+H + +E+ Sbjct: 180 NDCAVFITYRGKNTQYEKIMQHFRDVGVPVIVISGNAHAKIIPLATHAIIASHDERDFLK 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + S+ A + D LF L ++ + +R + +++ Sbjct: 240 VGTFSSQVAFEYILDSLFALLYAKEYQKNIVELRKKQTVLE 280 >UniRef50_Q1YGT9 Putative transcriptional regulator, RpiR family n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YGT9_MOBAS Length = 305 Score = 167 bits (422), Expect = 5e-40, Method: Composition-based stats. Identities = 62/282 (21%), Positives = 119/282 (42%), Gaps = 6/282 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + R+RQ + ++D+ +AD LL D A S + +A AGVS+ SV++FA+ +G + Sbjct: 17 SLIDRMRQELPAMKRADRAVADALLENIDAATRSSVKAVAGRAGVSEPSVIRFARHMGCE 76 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF K+ L++ A S + + V + + + A+ + Sbjct: 77 GFSDFKIRLAQDYAIGRMYLSADYQHPAK---TGSDVAGHVYEATSQALASAFAQRDPAA 133 Query: 122 LHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L ++ +RR+ G+G S VA +L ++ A+A D + T + D Sbjct: 134 LDRAADLIDGSRRVFCFGVGGSSANVAAEAENRLFRLDLAASATADAYKQRITAATAGKD 193 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY-TIAEEQATNS 239 D+ L S TG R L +A + G ++A+T L A + +E+ Sbjct: 194 DVFLMFSVTGRPRSLIESARSAKQCGASIIAVTT-AGTPLAIEADVLIPLIAFDEEKFFY 252 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + Q + D L L + ++ ++ ++ ++ L Sbjct: 253 MPNRGRYGQLFILDCLATLLGGRRMKHISSKLWNARTMLADL 294 >UniRef50_A5VV40 Transcriptional regulator, RpiR family n=37 Tax=Rhizobiales RepID=A5VV40_BRUO2 Length = 305 Score = 167 bits (422), Expect = 6e-40, Method: Composition-based stats. Identities = 57/281 (20%), Positives = 111/281 (39%), Gaps = 5/281 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + R+ Q ++SD++LA +L P A + ++A AGVS+ +V +F + LG Sbjct: 18 DIITRLHVVAQEGSKSDRRLAGLVLADPHYASKAAISEIAARAGVSEPTVTRFCRALGCD 77 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G K L++ALA + + I + + + + AA+ + Sbjct: 78 GVRDFKFFLAQALAIGGQYLTAEIPARDVRE---SRIATAVTDAAIAAIQRAGDGVDMGV 134 Query: 122 LHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + L + ++ G G S ++A +L ++G A D ++ + Sbjct: 135 LMKVAERLAAGGPVLCLGSGGMSSMLATEMENRLFRLGIPVNAQVDGQLQRMYAAVTTHE 194 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +LA S +G R + A + G + +AIT + L + A + E Sbjct: 195 TTVLAFSVSGFARSVVEAVLVARQYGAETVAITA-AGSDLARAADMLIPFQPNEDGNIYK 253 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 SA + + D++ A + E +R + + L Sbjct: 254 PTSARYGLLAILDMIATAAAEARGPKVLESLRRIKHSLNTL 294 >UniRef50_C9S176 Transcriptional regulator, RpiR family n=2 Tax=Geobacillus RepID=C9S176_GEOSY Length = 244 Score = 166 bits (421), Expect = 7e-40, Method: Composition-based stats. Identities = 57/265 (21%), Positives = 105/265 (39%), Gaps = 23/265 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M R+R L +D ++ DY++ + + Q++A +++V+FA+KLGY Sbjct: 1 MRFDERVRLYADRLNDTDDQIVDYIMEHREEIADIPIQKMAEALYTVPNTIVRFAKKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGF LK AL+ ++ + + + T + E Sbjct: 61 KGFAELKAALALEQRAEAAALAGGT-----------------------VIEKTKELLDER 97 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + E V L A+ + G+G S + A L +G A H +L Sbjct: 98 LIEEAVGKLHEAKHVFFYGVGDSAYFCEMMAKHLRCVGKRADFFVQRHDMLYNADRCGEK 157 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D++ IS +G +++ A + G V+++T F PN+L A LY A +Q N Sbjct: 158 DVVFVISASGETKQVLEAVAAAKQNGAFVISLTHFCPNSLADLADFRLYCWAPKQFLNKY 217 Query: 241 SISACHAQGMLTDLLFIALIQQDLE 265 ++ + ++ L + + Sbjct: 218 DVTDRTSLYLVLRALSERYWKTYGK 242 >UniRef50_C2EDG2 RpiR family transcriptional regulator n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2EDG2_9LACO Length = 274 Score = 166 bits (421), Expect = 7e-40, Method: Composition-based stats. Identities = 62/282 (21%), Positives = 120/282 (42%), Gaps = 14/282 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + +I + L+ D+K+A +L P + +LA EAGVS +S+ +F + LG Sbjct: 1 MTIVDKIYDKQPELSTCDQKIAHVILKNPIEVVDKTISELAEEAGVSLASISRFCKTLGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+ L+ S Q + + +K+ + T + S+E Sbjct: 61 AGFHQLKIELAR--------VSEENTTQAVEKENFGGQLSEFVKDKEIELEKTFSQISQE 112 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + L AR I + G + A++ +K +IG A + LA + Sbjct: 113 TCEKICGKLLHARAIQVIAEGNTYANAEDAVYKFSQIGLFAFSSASWETALAQTMNLQKE 172 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+LL S +G + L + DE + G V+++T + + Q++ T+A + S Sbjct: 173 DVLLVFSNSGEAKSLLVQIDEAKKRGITVISLTNHENSPIAQKSDLHWRTVARPKVLMSE 232 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 + A + +FI +++++ + R+ + +L+ Sbjct: 233 YYYSRLALVSAIEAMFILILKKEPK----RLERIK--FHELL 268 >UniRef50_D1C9F1 Transcriptional regulator, RpiR family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C9F1_SPHTD Length = 290 Score = 166 bits (420), Expect = 8e-40, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 107/279 (38%), Gaps = 6/279 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RI +RY L+ +++A ++ S+ +L V ++VV+ AQ LG+ G Sbjct: 6 LQRRIAERYDQLSPKQRQVARFIADNEAFTAFASAAELGKAVDVDAATVVRLAQSLGFSG 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + L+ + + + + + D + + ++ + + TLN E + Sbjct: 66 YAELQGVIRGRIPERLTFVQRIEQQRQQPMD-RQQLPVQVFTNDIENLNQTLNQTQPEAI 124 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQASSPDD 181 V + A +I+ G+G S VA L +G + + L T+ P D Sbjct: 125 EAAVEAICRADHVIVVGMGFSAAVAVFLGHGLNSLGIRTTVLTEGGSTLTITLANLRPTD 184 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++ +S R+ A G +A+T + + + A H L + + Sbjct: 185 LMIGVSVWRYLRDTVAALAGAAERGVPTMALTDSSVSPPARIADHVLVAATRGVGHSLSP 244 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + +LL + ++ E A +R + L ++ Sbjct: 245 ----VGLIAVVNLLLAEIAVREPERALAVLREVDRLYRE 279 >UniRef50_C2LK66 Phosphosugar-binding transcriptional regulator n=4 Tax=Enterobacteriaceae RepID=C2LK66_PROMI Length = 283 Score = 166 bits (420), Expect = 9e-40, Method: Composition-based stats. Identities = 68/262 (25%), Positives = 125/262 (47%), Gaps = 1/262 (0%) Query: 17 SDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALAS 76 ++++LA YLL D +++ +LA +AGVS +SV++F++++GY G+P K+ Sbjct: 18 TEQRLAHYLLENSDNIASMNAAELAQKAGVSSASVIRFSRQMGYGGYPEFKIDYLSEEKQ 77 Query: 77 QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRII 136 Q S S ++ + D + K T A+ ++ + + + SA+RI+ Sbjct: 78 QKSS-SDILYANLAKTDSTEQIIAKTGHLFTTAIQDSIALLDAATIDLLAEKMISAKRIV 136 Query: 137 LTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELN 196 L G+GAS +VA + KL+++ N D+HA LA S DDL +A++ G ++N Sbjct: 137 LFGVGASAIVASDIFHKLIRVNKNTLFSADLHAQLAYSANLSADDLAIAVTARGNTADIN 196 Query: 197 LAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLF 256 + G +A+T F + + A++ L +EQ + I+ Q + D+LF Sbjct: 197 RMLKAAKQEGCITVALTRFGQDEATRLANYTLPYFYDEQHSQLGVITPQVLQMVAFDVLF 256 Query: 257 IALIQQDLELAPERIRHSEALV 278 + A + + V Sbjct: 257 FKYMTLAKGSAEKALLKGRQAV 278 >UniRef50_C0D858 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D858_9CLOT Length = 275 Score = 166 bits (420), Expect = 9e-40, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 112/258 (43%), Gaps = 6/258 (2%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 ++R L +++ A+YLL LA EA VS+++VV+ K+GY G Sbjct: 12 KLRGVIGSLGAQERRFAEYLLNSFAGIEKEPIAVLAKEAQVSEATVVRVCHKMGYSGLKE 71 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 LK+ ++ + + + E++ A+ T+N+ E+++ + Sbjct: 72 LKIVVARENETAGSFDGGIGGQY------MDELKERVFMGAIRALQDTMNLIDEDEVEKA 125 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 +L +A I + G+G S VA++ +LMK+G + + + + + D+ + Sbjct: 126 TKVLCNANYISIYGVGGSVPVARSLKHQLMKLGIPSNVYNEFQPTIIAAEKYNKGDVAIG 185 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 IS++G ++ A G + IT + +A+ + +T +E + A Sbjct: 186 ISHSGESSQVVEALRIARGKGATTICITSYGDSAITHCSDVKFFTTSETLLNGGDNSLAR 245 Query: 246 HAQGMLTDLLFIALIQQD 263 AQ + +LL++ + + Sbjct: 246 IAQTSIINLLYLNVALKY 263 >UniRef50_C8ZYC7 Sugar isomerase n=4 Tax=Enterococcus RepID=C8ZYC7_ENTGA Length = 306 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 59/282 (20%), Positives = 116/282 (41%), Gaps = 4/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M ++RQ LA +++ L D+LL P + ++L+ + V S+ ++ A+KLG+ Sbjct: 1 MLLQEKMRQI--KLAPAERSLIDFLLANPTAMADQTIKELSEKTYVHPSTFIRIAKKLGF 58 Query: 61 KGFPALKLA-LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ LK A L E V + D + + +KL K + TL++ Sbjct: 59 NGWLDLKTAFLEEQTYMSSHFTDVDANFPFSSHDGIMTIAKKLAKLEQTTIEDTLSLIHH 118 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++L + L +A I + A+ L++Q+F K+ ++G N + Sbjct: 119 DELQKAKQSLLNASHIKIFASNANTLISQDFVLKMRRLGKNIHVCDTFGESAYEASNCTS 178 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN- 238 D + ISYTG + + + ++ +T NAL + + L E+ + Sbjct: 179 DTTAILISYTGENKMIKEIGKILAERQVSIIGMTSIGENALAKLSDCVLNITTRERLYSK 238 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A+ + + L D+L+ + + E + + K Sbjct: 239 IANFTINTSVCYLLDVLYGIVFSEHYEKNLQHLIDIGMAYDK 280 >UniRef50_B9B6B2 Transcriptional regulator, RpiR family n=3 Tax=Burkholderia multivorans RepID=B9B6B2_9BURK Length = 311 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 64/264 (24%), Positives = 110/264 (41%), Gaps = 3/264 (1%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I+ R LA S+ K+ + LL P ++ Q+A AGVS +V++ A+ LG+ GF L Sbjct: 40 IQARSGDLAASEAKVVELLLSDPLFVGASTTAQVAARAGVSPPTVIRAARALGFTGFTEL 99 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 K+ ++ A + + + D V E I+ A+ A L + V Sbjct: 100 KIEIARARGTARFFAPPEV---LTADASSAAVLETSIRTGVDALSALSGAIEIAALDKAV 156 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 ++ AR++ G G S VA + ++L +G + D + + + P D+++A+ Sbjct: 157 ASIQQARQVFAFGAGPSATVAADAVFRLRAVGVTTVGIPDYLSAMIAARLLGPGDVVIAV 216 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S TG AD G ++A+T L A L A+ + Sbjct: 217 SSTGRTSSTLAVADAASSAGATLVAVTNQYGTPLANLADIALVVGGAPLPAQMAAAGSRL 276 Query: 247 AQGMLTDLLFIALIQQDLELAPER 270 AQ ++ D L AL +D + Sbjct: 277 AQLVVIDALVAALALRDPARSRRA 300 >UniRef50_Q4L9T6 Similar to transcriptional regulator n=2 Tax=Staphylococcus RepID=Q4L9T6_STAHJ Length = 268 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 64/261 (24%), Positives = 113/261 (43%), Gaps = 14/261 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M RI++ L + DKK+ +Y+ + LA G S +++ +F+ KL Y Sbjct: 1 MKFENRIQRSRHVLTKMDKKIIEYIQTHELDENFSTINSLAYAIGTSPATITRFSGKLNY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F +K L + + + + + + + + + T SEE Sbjct: 61 ANFQDMKFNLQHEKSEKVVENAP--------------LVQLIHRYHQNIIQQTGEFISEE 106 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 K+ L++ R++ G+G+SGL A F ++ M++G + D H + + S Sbjct: 107 KIKRLAHNLKTCRQVNFAGLGSSGLTASEFYYRTMRMGIKGSVSTDAHQMKISASLLSSR 166 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ +AIS +G EL AA G V+ IT F +AL + A L T A+ +S Sbjct: 167 DMFVAISNSGETLELIEAAKIARNQGAYVVVITNFEGSALTKNADLVLITTAQSSNNDSK 226 Query: 241 SISACHAQGMLTDLLFIALIQ 261 I++ A L D++ L+ Sbjct: 227 FINSQIATLFLLDIVSYLLLN 247 >UniRef50_A5IPI4 Transcriptional regulator, RpiR family n=54 Tax=Staphylococcus RepID=A5IPI4_STAA9 Length = 266 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 116/262 (44%), Gaps = 14/262 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M R+++ ++DK++ +Y+ + + LA+ G S +++ +F+ KL Y Sbjct: 1 MKFENRVQRYQHLFTKTDKRIVNYIRQNGYSDAFSTINSLAHAIGTSPATMTRFSHKLDY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + F LK + + + S + +++ K + + T + Sbjct: 61 ENFQDLKFNIQQEMTETVIENSP--------------IIQRIHKYHQQIIQQTGEFIDND 106 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + L+S+R I+ G+G+SGL A F ++++++G D H + + S Sbjct: 107 IIQTFIDKLQSSRHILFAGLGSSGLSATEFYYRMIRMGLKGNVTTDSHLMKISASLLSHS 166 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ +A+S +G EL AA+ G V+AIT F + L A L T + + T+ Sbjct: 167 DMFIAMSNSGNTSELISAAEVAKSHGAYVVAITNFEGSKLTDCADLVLLTTDQSRNTDHQ 226 Query: 241 SISACHAQGMLTDLLFIALIQQ 262 I+ A L D++ L++ Sbjct: 227 FINTQIATLFLIDIVSYHLLEN 248 >UniRef50_C3WAG5 Transcriptional regulator n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WAG5_FUSMR Length = 283 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 49/277 (17%), Positives = 122/277 (44%), Gaps = 3/277 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L + Q + +++K+A ++L ++ + ++ + G S +S+ +F +K+G++ F Sbjct: 7 LFLLDQLLPSFSPAEQKIALFILENTFAVIDMTIEDMSEKIGTSVASISRFTKKIGFENF 66 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 LKL +++ + I + + + + K N+A + ++ + +K+ Sbjct: 67 YLLKLGIAKEFVNSSN---KTISLNVNKNSNATDIYTNVAKTNSAILEESIEYFNTDKME 123 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 E ++ +A I L +GASG++A+ +K +++G + + D H+ L D+ Sbjct: 124 EISEIILNANHIYLFAMGASGILAKESWYKFIRLGLKCSMIEDFHSQLLQASILDDTDVA 183 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 L S++G+ +++ + + + IT + Q CL+ + S Sbjct: 184 LIFSHSGINKDVLTLLEIINETPAYSIGITNYARTPFSQSVDICLFFSENSTPMDKVGFS 243 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + Q ++ + L+ L + + + + + KK Sbjct: 244 SRIPQLIIIESLYRILSLKLGKKSKICQERYKQIFKK 280 >UniRef50_C3RM35 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RM35_9MOLU Length = 284 Score = 164 bits (416), Expect = 2e-39, Method: Composition-based stats. Identities = 60/271 (22%), Positives = 126/271 (46%), Gaps = 2/271 (0%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 + ++ L Y+L + ++S+++LA S +S+V+F +KL Y+G+ K+AL+ Sbjct: 3 NNFSSVERILGKYVLENGEKVLNMSTKELAKATFTSPASIVRFCRKLEYEGYNDFKIALA 62 Query: 72 EA-LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 S+ + + + +G D + V + + ++ T+ E+L V M+ Sbjct: 63 AQLQYSRLSNDDINANYPFKGTDSVYTVASNIANLSKESIDITMKNLDLEELRLVVLMIT 122 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 A+ I + G+ +A +F +K+ +IG + + ++ L S+ + L + ISY+G Sbjct: 123 KAKVIDIYGVSGPLRIASDFQYKMFRIGKDVRISQMINEQLFQAAQSTSEHLAILISYSG 182 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN-SASISACHAQG 249 E+ AA + R +AIT F N L + LY + E + A+ S+ + Sbjct: 183 ETEEVIEAAKILYRRKIPAIAITSFGENRLVKYTQRVLYLNSSEFIYSKIATFSSTLSLH 242 Query: 250 MLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +L D+++ + ++ E ++ L+ Sbjct: 243 LLLDIIYGCVFSKNYEDNLNYKIETDNLIDH 273 >UniRef50_Q0STT6 Transcriptional regulator, RpiR family n=14 Tax=Clostridium RepID=Q0STT6_CLOPS Length = 291 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 59/279 (21%), Positives = 123/279 (44%), Gaps = 7/279 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I+ ++ L++ K +A+Y+L D A +++ +L N GVS+S+VV+FA +LG+ Sbjct: 5 DLMRLIQVKFPKLSKGQKLIAEYILKNYDKAAFMTAAKLGNNVGVSESTVVRFATELGFS 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L+ AL E + ++ S + + ++K + + ATL + + Sbjct: 65 GYPKLQKALQELIKNKLTSVQRLELSNDFI--SEENALKGVLKADIENIRATLEKINHKT 122 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASSPD 180 E V + A+RI + G+ +S +A+ + L I N + + + Sbjct: 123 FDEVVNEIFKAKRIYIIGLRSSTALAEFLGFYLNLILDNVRVISNGISDTFEQMLNLGEG 182 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++ I + + A + K+++IT + L ++ H L + + Sbjct: 183 DLVIGIGFPRYALKTIDALEFAKTRNAKIVSITDSLISPLASQSDHTLIAQSNMASF--- 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + + A + + L IA+ ++ E E + K Sbjct: 240 -VDSLVAPLSVINALIIAVGIREKEKITSTFSELEKIWK 277 >UniRef50_B4SHK0 Transcriptional regulator, RpiR family n=3 Tax=Stenotrophomonas RepID=B4SHK0_STRM5 Length = 282 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 87/282 (30%), Positives = 139/282 (49%), Gaps = 2/282 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M LL+IR ++ ++++AD++L R SSQQLA+ G+SQSSVVKF+QKLG+ Sbjct: 1 MPPLLKIRSERGQMSAIERRIADFILDNAHLLRDYSSQQLASALGISQSSVVKFSQKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG+P LK ++ + +A P D +GE L + A T N E Sbjct: 61 KGYPDLKYSIGQDVARAGADPQQAPSEPDS-GDDYLRLGEALRRSKAQAEEETRQANPRE 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ V +L A ++ + G+G GL A+ FA +L +G D +LA + A+ P Sbjct: 120 EIERIVQLLDGAPKLFVYGLGDDGLYAREFAMRLSLLGLLVVPHTDPILMLANLSAARPG 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+LL S G +L+ + + +GGKV++IT T N L+ A L A ++ A Sbjct: 180 DVLLMFSEFGNLPQLSQLSRQFQDMGGKVISITRHTANPLRAHADAALAVCAHDRTPQVA 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 + A L D LF+ L + + + + E + L+ Sbjct: 240 QLLYRSAMHALLDFLFVLLCHANPDRQQQLAVNLER-IDHLL 280 >UniRef50_C3WA33 Transcriptional regulator n=3 Tax=Fusobacterium RepID=C3WA33_FUSMR Length = 283 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 56/281 (19%), Positives = 109/281 (38%), Gaps = 8/281 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L + Y ++S KK+A+Y+ +S +LA E S +++ +F++ LG+K Sbjct: 4 KILRYLDDNYNSFSKSFKKIAEYIKYNQSIISFISINELAKETETSPATITRFSKNLGFK 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P + + + Q ++ I D V +++I N + E+ Sbjct: 64 GYPDFQKIFQKEVEQQTSYMKGLKNS-ITERDDSSSVLQEMINTNIELLQEMDVFEIEKS 122 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAA-VRDMHALLATVQASSPD 180 L + V + S+R++ + G S +A + L + + + + PD Sbjct: 123 LDQAVDWINSSRKLYILGARGSYALAYYLYFMLKEFREGVELMISGASDFTDKLLYTQPD 182 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DLLL IS+ + G KV+ IT + L + L T E+A Sbjct: 183 DLLLTISFHPYTNFTYQVTEFFKEHGNKVITITDKKDSTLGNISDLVLTTKNGEKAY--- 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++ + L + L D E E++ + + + Sbjct: 240 ---TFVPGTVIINALLVKLGMVDKENTVEKLDKLKEITDRF 277 >UniRef50_B1QVU2 Transcriptional regulator, RpiR family n=9 Tax=Clostridiales RepID=B1QVU2_CLOBU Length = 275 Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats. Identities = 45/278 (16%), Positives = 110/278 (39%), Gaps = 14/278 (5%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + +I Y+ +K +A++ + + SS+ ++ + VS++++ +F++K G+KG Sbjct: 8 IIPKIESLYENFTPLEKTIANFFIHNTEKI-DFSSKNISKKLFVSEAALSRFSKKCGFKG 66 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + + +P + + ++++ + + + EE++ Sbjct: 67 YREFIFLYEQNFVEKPSNVTTNYT-------------KQVLDTYQELLNKSYALLDEEQM 113 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + +R+ + G G+S L AQ + M+IG N ++ D H + + D L Sbjct: 114 VRITKLFNQKKRVYVYGRGSSALAAQEIKLRFMRIGVNIESIVDSHIMKMNFVLLNSDCL 173 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ IS +G E+ + + IT ++ + +E N +I Sbjct: 174 VIGISVSGKTDEVLDSLRAAKSRNATTVLITSRKEKEFEEFCDEIILLAVKEHLDNGKAI 233 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 S ++ D+ + +Q D E ++ + Sbjct: 234 SPQFPILVMVDIFYAHFLQSDKFHKQELHDYTLNALHN 271 >UniRef50_A4CAD1 Transcriptional regulator n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CAD1_9GAMM Length = 283 Score = 163 bits (413), Expect = 5e-39, Method: Composition-based stats. Identities = 62/281 (22%), Positives = 121/281 (43%), Gaps = 11/281 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + RI++R L QS++ +A +L A S +LA A VS +S+ + A+ L Sbjct: 1 MDIVSRIKERLGHLRQSEQLVAQLILENLQFAASASIGELAQRANVSHASITRLAKALDC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +KL L+++ I ++ R + K A + + ++ Sbjct: 61 DNVRDMKLQLAQS--------LAVGERFISENNSQREDIPAIYKAIHAILDLNAGLIAQT 112 Query: 121 KLHECVTMLRSARRIILTGI-GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++ E + S+R ++ G+ G S +VAQ +L ++ + A D + T + Sbjct: 113 QVEEAARCIASSRHTLIFGVGGGSSVVAQECHNRLFRLDVLSNAYSDPVMMRMTAASVDV 172 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+++ +S TG+ ++L AA G KV+AI +AL A+ L E Sbjct: 173 CDVVVVLSLTGLPQDLIDAASIAKDYGAKVIAIC--PDSALADVATFHLPIKTNESDYIF 230 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +A +A D+L + + + E++R + + + Sbjct: 231 TPSTARYAMLAAVDVLASEVAILTQKKSREKLRRIKHELDE 271 >UniRef50_Q71W74 Phosphosugar-binding transcriptional regulator, RpiR family n=17 Tax=Listeria RepID=Q71W74_LISMF Length = 283 Score = 163 bits (413), Expect = 5e-39, Method: Composition-based stats. Identities = 66/283 (23%), Positives = 120/283 (42%), Gaps = 3/283 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L++IR+ L S+K+LA+Y+L P ++LA A VS +++ + KLG Sbjct: 1 MNILIKIRE-LTNLTNSEKELANYILANPKKTLQCKPKELATAAFVSAATIYRLINKLGL 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G LK+ ++ +L E + I D + L + + TLN E Sbjct: 60 NGIGELKIEIASSLRETNEEKDLNYDYPILESDTPYQIMTNLNQIYKGTIDETLNNADPE 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L + L A+ I + A+ AQNF +++ +IG + + + S + Sbjct: 120 ELVKIGEKLIQAKTIDVYAASANLFFAQNFKFQMQEIGVLVNVPEEDYIQSLSAANSDEN 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN-S 239 + + +SY G R L + ++ IT N L + A+H +Y + E N Sbjct: 180 HIAIVVSYGGRSRTLQRVVKILSENNVDIILITSMQDNPLVEFATHKIYMASAENHYNKV 239 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERI-RHSEALVKKL 281 +S S + + D L+ Q+ E + + + + +L Sbjct: 240 SSFSTRQSLLSIFDTLYSIYFNQNYEKNIQYKTTNYQKMNTEL 282 >UniRef50_B0NFU9 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B0NFU9_EUBSP Length = 285 Score = 163 bits (413), Expect = 6e-39, Method: Composition-based stats. Identities = 62/280 (22%), Positives = 128/280 (45%), Gaps = 14/280 (5%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L I+++Y + +++K+AD++L P A + +LA ++GVS ++VV+ +GY G Sbjct: 14 VLEVIKEQYDYIFSAERKVADFVLQNPQKAVDSNVSELAKQSGVSDATVVRMCHHIGYTG 73 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + +++L+ L + S + R EKL +E M A + + + Sbjct: 74 YYQFRISLARDLGKKQYGSSALAES--------RDAVEKLFQEYAQTMLAIGSRIDADVM 125 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 CV +L++ + + +G + +AQ ++L ++G + + V + DDL Sbjct: 126 WNCVNLLKTCKEAHIMAVGNTCPLAQYMGFRLGRLGIKSTYNVAAEYFMNHVNLADQDDL 185 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L+AIS +G R++ + G K +AIT F + + A + L + +E+ + Sbjct: 186 LIAISQSGTSRQVIQGLELGKEKGLKSIAITAFAQSPVSNLADYVLLSAGKEEPFSFYKG 245 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 A + + D L + E I+ ++A +++ Sbjct: 246 YAHMNETAVIDALL------NFVTNEELIKTTQADKPEMI 279 >UniRef50_B0MBA6 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0MBA6_9FIRM Length = 286 Score = 163 bits (413), Expect = 6e-39, Method: Composition-based stats. Identities = 59/259 (22%), Positives = 116/259 (44%), Gaps = 10/259 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L I YQ L +K++ADY+ PD ++ QLA +G S+++VV+ + LGY+ Sbjct: 6 NVLDSIDNLYQQLFSKEKQIADYIKDHPDEVVMMNVSQLAKASGTSEATVVRTCKHLGYQ 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ L+L LS + ++ + + N + + S++ Sbjct: 66 GYYQLRLILSRDIGTKSNDIGIDADT---------DFVSYTFERNIQNLRNLSSNLSKDV 116 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L +C +L A + + G + +A + +++L + G + + L V S +D Sbjct: 117 LLQCALILLKAPAVHIIATGNTTPIALDLSFRLSRFGVQSFSSSISEYYLNNVSLGSKED 176 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++AIS +G +++ AAD +G +++IT + + L + + H L + E N Sbjct: 177 VVIAISGSGTSKQVLQAADIAKDIGMTIISITSDSDSPLARVSDHILSSSEEHPLFNETK 236 Query: 242 IS-ACHAQGMLTDLLFIAL 259 + + D L A+ Sbjct: 237 EPLSHLCSMAICDTLLYAV 255 >UniRef50_C7TGD6 Transcriptional regulator, RpiR family n=3 Tax=Lactobacillus rhamnosus RepID=C7TGD6_LACRL Length = 277 Score = 163 bits (413), Expect = 6e-39, Method: Composition-based stats. Identities = 64/281 (22%), Positives = 136/281 (48%), Gaps = 8/281 (2%) Query: 1 MN-GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 MN RI Q Y L ++ +++ADY + S + L+++ GVS +++ +FA++LG Sbjct: 1 MNTFDSRIAQVYSALGEASRQVADYFRHNYAKVANSSLRNLSDKIGVSTATISRFARQLG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 + F LKLAL + + + + +D K + N AA+ TL+ ++ Sbjct: 61 FASFDQLKLALLKEI-------DNTTNGDVETNDNSLASARKTVNANIAALEGTLSFLTQ 113 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 +++ V +L A ++ L G+G+S ++A+ +++ A D H L + + Sbjct: 114 DQIDHSVNLLLDANKVALFGLGSSNVIAKAAYHTFLRLPLTLIADNDYHMQLMSANKLTE 173 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+ + IS+TG ++ D + ++A+T + + L +R S ++I+E+ S Sbjct: 174 HDVAIVISHTGNDTDILALVDLLSAHQVPIIAVTSYATSPLAKRVSDVFFSISEDTRYRS 233 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ + +Q + D+L+ L+++ + + I V + Sbjct: 234 DALISMTSQLAIFDVLYTELVRRMGLQSEKTIALVHQAVAQ 274 >UniRef50_Q9K8R3 BH2940 protein n=4 Tax=Bacillus RepID=Q9K8R3_BACHD Length = 284 Score = 163 bits (412), Expect = 7e-39, Method: Composition-based stats. Identities = 64/280 (22%), Positives = 120/280 (42%), Gaps = 5/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + RI + +++S KK+A+YL+ PDTA L++ +LA A V +++V++FA LGY+ Sbjct: 5 DVYKRIMDLQEKMSKSQKKIANYLIQHPDTAPFLTASKLAKYAAVGEATVIRFAVFLGYE 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L+ L EAL + S V +D E+++ ++ A + ATL E+ Sbjct: 65 GYPDLQRHLQEALQKKMTSAEVFARTT-DREDRPSHAIEEILTDDMANLRATLQQIELEE 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V + A+RI + ++ + Q + L + N V + + + DD Sbjct: 124 FEQAVNSIIEAKRIYVIAYRSAASLGQFLTFYLDLVLQNTELVEQADGVSEHLLDITEDD 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++ + + + + G K + IT + L L E + Sbjct: 184 LVIGFGFARYTKRTVDVLKYVKQRGAKTIVITDHALSPLVPYGDRVLLAATEINSF---- 239 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 I + A + A+ + + E R++ E L Sbjct: 240 IDSFAAPHSIVSAFITAVTRSEHEKVQNRLQQLEELWASF 279 >UniRef50_Q8RAK1 Transcriptional regulator n=1 Tax=Thermoanaerobacter tengcongensis RepID=Q8RAK1_THETN Length = 263 Score = 163 bits (412), Expect = 8e-39, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 115/261 (44%), Gaps = 8/261 (3%) Query: 21 LADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPES 80 +A Y++ + A ++S+ +A E +S+S+VV+FA +LGY GFP LK AL E + + + Sbjct: 2 IAQYIVNNYEKAVFMTSKDIAKELKISESTVVRFASELGYNGFPELKTALQEFVKGKLTT 61 Query: 81 PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGI 140 +I + + +++ + ++ TLN + V + +AR+I + G+ Sbjct: 62 LQRL---EITKESNEEKLLAEVLNLDIGSIKQTLNEVDVGTFKKVVDCILNARKIYIVGL 118 Query: 141 GASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASSPDDLLLAISYTGVRRELNLAA 199 S ++A+ + L + N V R + L + +DL++ I + R Sbjct: 119 RTSTVIAEYMGFYLNLLRDNVIVVKRGVSDLFEQILRVEREDLVIGIGFPRYSRRTVDLL 178 Query: 200 DEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIAL 259 G V+A+T + L + A L + + + + + A L + + +A+ Sbjct: 179 KYAKSQGATVIALTDSFISPLARIADEVLTA----KNSIISFVDSLVAPLSLVNAIVVAV 234 Query: 260 IQQDLELAPERIRHSEALVKK 280 ++ E E + ++ Sbjct: 235 GTRERETITGVFEKLENIWEE 255 >UniRef50_C7NDE7 Transcriptional regulator, RpiR family n=2 Tax=Leptotrichia RepID=C7NDE7_LEPBD Length = 286 Score = 163 bits (412), Expect = 8e-39, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 115/267 (43%), Gaps = 1/267 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + ++ ++ + ++K++ADY+L + LS++ LA +A VS+++VV+F +KLG + Sbjct: 2 IINKL-EKKENFTNNEKEIADYILRHLEEIHLLSAENLAKKAFVSKATVVRFCRKLGVER 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + + L + + + + + + + + + AT + Sbjct: 61 YREFQRRLDKEVEEMMKIKGLLSEEPVNSETKYDEIISIIPSLYERVIGATKLNLDTTVM 120 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + L++A++I + G G S ++A+ ++K M +G +AA ++ D+ Sbjct: 121 EKIIEKLKNAKKIEIYGTGISYILAKLTSFKFMTLGIESAAYDGLNEHYIISAEKGEKDI 180 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L IS +G + A+ + + V+ I + +++ S + A + + Sbjct: 181 ALIISLSGTNPYMIRIAEYLKKRNVFVVGIGNGSSEEIKKACSEYIEIHAPNYILSFEMV 240 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPE 269 S + D+ F +L+ + Sbjct: 241 SLFTGINYVLDIFFTSLLVLNYYKNIN 267 >UniRef50_C8STB5 Transcriptional regulator, RpiR family n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8STB5_9RHIZ Length = 275 Score = 163 bits (412), Expect = 8e-39, Method: Composition-based stats. Identities = 57/277 (20%), Positives = 117/277 (42%), Gaps = 10/277 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + +R + + ++A+ +L QPD S +LA + S++SV++F + G+ G Sbjct: 5 LIASLRAAAGDMTPALARVAETVLAQPDATLRQSITELAEASASSEASVMRFCRDQGFAG 64 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F KLAL++ LA+ + + + ++L++ ++ T + E + Sbjct: 65 FQDFKLALAKELATDERARDIGL---------PTDDIQRLVETAIISLRETEQLIVREDI 115 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + L +A I GI AS + AQ A+K+ +IG + A+ D H + + + Sbjct: 116 AKAARQLLAATAIDCFGIAASAITAQYLAYKMTRIGKLSRALGDAHLAVMAAGTTQKGTV 175 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + IS +G + A+ G V+ I+ + + L L E + Sbjct: 176 QVVISSSGSTIDAVRIAELARSQGAFVIGISNRSKSPLVAACDLALIASWPETPLTGGAF 235 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + +Q ++ D L +++QD + + +V Sbjct: 236 PSKISQLLIVDALAAEMMRQDPAR-LALLGRTAEVVS 271 >UniRef50_UPI0001BC58DB RpiR family transcriptional regulator n=1 Tax=Fusobacterium sp. D12 RepID=UPI0001BC58DB Length = 283 Score = 162 bits (411), Expect = 9e-39, Method: Composition-based stats. Identities = 56/284 (19%), Positives = 123/284 (43%), Gaps = 9/284 (3%) Query: 1 MNGLLRI-RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 MN L + ++ Y L + +KK+A+Y + P LS+ +L E GVS +S+++F++ LG Sbjct: 1 MNKLNQFYKEHYNTLTKGEKKIAEYFVKNPKKVMMLSALELGKEIGVSDASILRFSKALG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 ++ F LK ++ +P+ + + K++ + + L Sbjct: 61 FQKFSDLKNYIAS--GFSTITPNDRMVKNWDNFHSQNDIVNKIVNSDLENIKEFLLHIDF 118 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATV-QASS 178 E++ V + A++I GIG+S ++Q W + ++GFN + + L + Sbjct: 119 EQIETVVNWMNKAKKIYFLGIGSSRAISQFMFWHMKRLGFNTECINEGGLGLYEAFSHIT 178 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D+++ S+ + + G K++ +T + + + L T E N Sbjct: 179 KKDIVMLFSFPRFLNDEVKSITLAKEQGAKIITVTSNPFSEISFLSDMVLETFVE----N 234 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 ++ L +++ A+ +++ E ++ +LVK + Sbjct: 235 DGFFNSYMVPMELCNIMLTAIFEKNKESIFTELKK-NSLVKDFL 277 >UniRef50_A5IV96 Transcriptional regulator, RpiR family n=113 Tax=Staphylococcus RepID=A5IV96_STAA9 Length = 290 Score = 162 bits (411), Expect = 9e-39, Method: Composition-based stats. Identities = 61/280 (21%), Positives = 128/280 (45%), Gaps = 5/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L I +Y + +++KK+A ++L P + SQ LA+ +S SSV++F++K+ Sbjct: 3 NVLTEIDSQYPYMTKNEKKIAKFILNSPQKVIKMRSQDLASLLDISTSSVIRFSKKITDG 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ +S+ + S + ++ ++ + KL T A+ N +++ Sbjct: 63 GFHDLKINISKYV----PKASSIYNVELMNNESTESLRTKLHTRTTRALNHANNELNDKT 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + L+ + I + G GAS +VA + KL +IG N V++ H + + +D Sbjct: 119 IDQICHCLKRSETIFIYGFGASFVVATDLYQKLSRIGLNIQLVQETHIFATLLATHNSND 178 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSA 240 ++ I+ G + E+ + ++ IT N + Q ++ L +E + Sbjct: 179 SVILITNNGTQSEMQSMVKVIDDYHIPIITITSTRDNPVAQASNIVLTYGKTDENEMHMG 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + ++ AQ D+L+ + + + + I S+ + Sbjct: 239 ATTSLFAQMFTIDILYYRYVALNYHASLDFITQSKMALDN 278 >UniRef50_C8N6B7 RpiR family phosphosugar-binding transcriptional regulator n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N6B7_9GAMM Length = 273 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 50/274 (18%), Positives = 107/274 (39%), Gaps = 17/274 (6%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I Q + ++K+ADY L +T + + LA GVS++++ +F+QK G++G L Sbjct: 12 IEAHLQEFSPVERKIADYFLGGGETPPEETGKALAKRLGVSEAALTRFSQKCGFRGLREL 71 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 A ++ + + ++ + T + ++ Sbjct: 72 FYAHNQ-----------------TENHGGSDFVQPVLASYQELLNKTYAIIDMRQIRRIT 114 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 +L +R+ + G G+SG+VAQ ++ M+IG A+ D + T + P+ L + I Sbjct: 115 ALLLHKKRVYIYGKGSSGMVAQEMKFRFMRIGLICEAITDDDMIRMTAVLTDPECLAIGI 174 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S +G + + A G + +T + + Q + IS Sbjct: 175 SISGRSKIIIEALQTAKSQGAATVLLTANADREYRDTFDEVQLFAVKNQMEHGRLISPQF 234 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ D+L+ + D + + +++ Sbjct: 235 PVLVVLDILYADYMNHDAAERDRIWQRTYRALQR 268 >UniRef50_C4Z5R8 N-acylmannosamine kinase n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z5R8_EUBE2 Length = 316 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 55/282 (19%), Positives = 114/282 (40%), Gaps = 8/282 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L IR R GL++ K++A+Y+L + L++ +L GVS+S+ V+F LG+ Sbjct: 9 DVLSLIRVRMSGLSKGHKRIAEYILANYEKCAFLTAAKLGEVVGVSESTAVRFPAALGFS 68 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P + AL Q + S + + +V ++ + + TL Sbjct: 69 GYPEFQKAL--EDILQEKIHSFDRIDVLNSHMTTNMVVNNVMSMDARKIEHTLKSFDTTS 126 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAV--RDMHALLATVQASSP 179 V + +A + + G + +A+ F + L + N V + + L + Sbjct: 127 FDMAVEDIMAAESVYIIGARSCEPLAEFFGYYLRMVKKNVQVVKTGNTNELFEQMMYIGE 186 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+ + IS+ A + +V++IT + + +S L+ ++ + Sbjct: 187 GDVAIGISFPRYSMRTLKAMEFANNRQARVISITDSVHSPMNMYSSCNLFARSDMASI-- 244 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + A L + L +++ ++ E E I A V Sbjct: 245 --VDSLVAPMSLINALIVSICLKNSEQVVENIEKINAFVDNF 284 >UniRef50_UPI000169311A hypothetical protein Plarl_08670 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI000169311A Length = 267 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 63/261 (24%), Positives = 123/261 (47%), Gaps = 17/261 (6%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L I+ +Y ++ +KK+AD+LL P A +++A++ GVS +S+ +F++K+ + Sbjct: 7 SLLKTIQSKYSSFSEKEKKIADFLLSSPAAAAQCHIKEIADQTGVSVASITRFSKKVLCQ 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F LKL L+ D + +L + ++ E Sbjct: 67 SFVELKLKLARE----------------SYDHTKDELDVELKNQYKEMFNDIESLIENEP 110 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L E +++++ A+R+ + G+G+SGL AQ F ++L ++GF + AV D H ++ DD Sbjct: 111 LKEVLSLIKKAKRLFIYGLGSSGLAAQEFNYRLSRMGFYSEAVTDPHLMIIRSVLLEKDD 170 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++A S +G ++L + + K++A T F L + A ++T S Sbjct: 171 VVIAFSRSGQTKDLLKSLEAAKGKKAKLIAFTAFGDTPLTKMAHKVIWT-IHPVRYQYLS 229 Query: 242 ISACHAQGMLTDLLFIALIQQ 262 + L DL+ L++ Sbjct: 230 TGLDMSVLYLIDLISFHLLKN 250 >UniRef50_C3RHU4 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RHU4_9MOLU Length = 285 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 56/281 (19%), Positives = 128/281 (45%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L ++ + +G + +K +A+Y++ + ++ +LA S +++ +F +KLG Sbjct: 1 MSLLSKL-EYKKGFSDIEKGIANYIIDHKEEVANMRLVELAEATFTSTATISRFCKKLGE 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 K + + K+ + ++ + ++ + + +D ++ V +L + + AT + + Sbjct: 60 KNYNSFKINFASSVLTSYQTDVDY-NRPFKENDSIQEVTNQLGELYKDTIEATKALLDYD 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L++ + L I + +GAS L F +++ I + + + Sbjct: 119 VLNQVIEKLLKTSVIDIFAVGASYLSGLLFEHRMISIDHFVNFKSSPNDQDKRSLFVNKN 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 + + ISY+G E+ D ++ G ++AIT + L++RA++CL ++E + Sbjct: 179 TVAIVISYSGESHEIKTIVDRIVDNKGTIIAITSINDSYLRKRANYCLTMCSKENIVSKI 238 Query: 241 SI-SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 S+ + L DL+F L Q+D R + E +K Sbjct: 239 ETYSSKLSSDYLMDLIFSILFQKDYYPNLIRKINCEQKYEK 279 >UniRef50_A6W619 Transcriptional regulator, RpiR family n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W619_KINRD Length = 296 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 70/268 (26%), Positives = 120/268 (44%), Gaps = 2/268 (0%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 S ++ LL P A L+ LA S+++VV+ A+ LG+ G+P +L L+ Sbjct: 18 PSATASGARVLQALLADPAGAAQLTVTDLARRTSTSEATVVRTARSLGFAGYP--QLRLA 75 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 A A P+ + + L V L T A+ AT L + + Sbjct: 76 LAAAGAHHEPAALLTGSLEDTADLATVVATLAAVETEAVAATARTLDVAALAAAADAVHA 135 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGV 191 AR + GIGASGL+A +F K ++G + HA L + P D LA+S++G Sbjct: 136 ARVVDCYGIGASGLLAADFDHKAARVGLVTRLRTEGHAALVSSALLGPGDAALAVSHSGR 195 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGML 251 +L +A + G V+A+T + L A H L E A + ++++ + ++ Sbjct: 196 TPDLVGSARQARERGAAVIAVTSSPGSPLAAAADHVLVATGRETAYRAGAMASRASSLLV 255 Query: 252 TDLLFIALIQQDLELAPERIRHSEALVK 279 D L++A++Q+ A +R + V+ Sbjct: 256 LDCLYVAVVQRLGPAATAALRGTYRAVE 283 >UniRef50_A6BIK8 Putative uncharacterized protein n=9 Tax=Clostridiales RepID=A6BIK8_9FIRM Length = 315 Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 60/280 (21%), Positives = 114/280 (40%), Gaps = 8/280 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L I +RY ++ KKLAD++ D A L++ ++ E GVS+S+VV+FA LGY G Sbjct: 18 LLKMIDERYHKFSKGQKKLADFIREDYDKAAFLTAAKMGGEVGVSESTVVRFATALGYDG 77 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 +P + AL E + + S R + ++ + + T+ E Sbjct: 78 YPEFQKALGELVRMKLNSIQRMEVTYGRI--SQGEILTSVLHSDIEKIKLTMEAIDHEAF 135 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM--HALLATVQASSPD 180 V + A+RI + GI + +A ++ L I N AV + + S D Sbjct: 136 EMAVDTILKAKRIYVIGIRSCSPLASFLSFYLNLICENVTAVNTNSSSEIFEQLIRVSED 195 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ IS+ A + V+ +T + + +S L ++ + Sbjct: 196 DVVIGISFPRYSMRTLKALEFASNRKATVITLTDSVHSPMTLYSSCNLIARSDMASI--- 252 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + A + + L +AL + + + E + + Sbjct: 253 -VDSLVAPLSVINALVVALCMKKQKEVITTLETLEQIWDE 291 >UniRef50_A8FIJ8 RpiR family transcriptional regulator n=2 Tax=Bacillus pumilus RepID=A8FIJ8_BACP2 Length = 283 Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 49/281 (17%), Positives = 121/281 (43%), Gaps = 7/281 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + +++ + L + +++ADY++ P L+ +LA++ G S +++++F+ +GY Sbjct: 3 DLIHKLQHKVVELTDAQRRIADYIVQHPMEVAFLTVDKLASKVGTSTATIMRFSAAVGYS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF + L A+ + + + N + + ++ + L+ +EE Sbjct: 63 GFSEFQKELQSAMKHKADPQTRLEANLKHSNKS--QLLHNHVELQFQNIQYALDNITEET 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSPD 180 + V + SAR ++ T + + V + ++ + ++ N + D + + + Sbjct: 121 FQQIVGKIASARHVLCTSVRSGRPVGEYMSFGINRLLGNCQYIDADQSDWVDDLVHFNSG 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D ++A+SY + + + G +VL IT + L + A + L + + Sbjct: 181 DFIIAVSYPRYAKRMKDLMEAAKSYGVEVLLITDSYSSPLTKYAQYVLPCSS----ASVG 236 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S ++ + + D + AL D E R+ ++ K+ Sbjct: 237 SHNSVVSAIFIVDFILSALAMNDPERTKPRLDQINHMLTKM 277 >UniRef50_A1WRM9 Transcriptional regulator, RpiR family n=2 Tax=Comamonadaceae RepID=A1WRM9_VEREI Length = 324 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 54/283 (19%), Positives = 99/283 (34%), Gaps = 9/283 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RI Q L +S +++AD++L P L +LA AGVS ++ +FA+ L + G Sbjct: 12 VAQRIAQALPRLTRSHRQVADFVLAHPLQVATLPIDELAAAAGVSVATANRFARALDFDG 71 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + + L +P + + + V + E+ + AT Sbjct: 72 YATFRAELVRGFE-SLVAPIERLRGNLEHPTTVAEVFATALDESRRNIEATRQSLDYAAC 130 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS---SP 179 V + AR I + G GAS +A L + + + + + + P Sbjct: 131 EAAVQRILKARSIYIGGFGASAWLAGLLQHGLDGSCNDVRMLSSVSGVTHSARTLMHAGP 190 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DL + +++ + A G VLA+T + A LY E + Sbjct: 191 QDLFIGLTFPRYLTDTVALAQIARSQGCAVLALTDRPNAPIAPLADVVLYCQT-ETSYRP 249 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 ++ L + L A+ + A V+ + Sbjct: 250 NCETS---VLALIEALTSAVALRAPGAAQSA-GRILQAVRPWL 288 >UniRef50_C0ZHI7 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZHI7_BREBN Length = 292 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 117/282 (41%), Gaps = 7/282 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + RIR+ Y L K A Y+L +P T ++ + +G S++++++ + L Y Sbjct: 5 SVQERIRKHYPELTNQQKLAAKYILAEPKTVALQPAKVVGALSGTSETTIIRLSYALAYS 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDD--PLRLVGEKLIKENTAAMYATLNVNSE 119 G+ L+ + +L + + + + + ++++ A + TL + Sbjct: 65 GYSELQSEIRSSLLEKVPKADAIHSFRTAAVEMKGKQDLISYNMEQDVAYIRQTLGELQK 124 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASS 178 L + V+ + +A+ I++ G +S A A+ L + NA + + + + Sbjct: 125 NHLLQAVSSIMAAKHILVVGFRSSYAPAHWLAFTLNVVRGNAHLYNGPVDDVNYLLTQIN 184 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D L++A+S+ E L A G K++ IT + + A L A Sbjct: 185 QDWLVIALSFPRYTSETILFAKAAKERGAKIIGITDDELSPIGPVADQILKVSAPAP--- 241 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ A + ++L ++Q D E +R++ E ++ Sbjct: 242 -TALKGMTAIFSMLNILISGVVQADGEQVQQRLKEYEETSRQ 282 >UniRef50_C0C1I3 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C1I3_9CLOT Length = 288 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 63/280 (22%), Positives = 123/280 (43%), Gaps = 2/280 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSS-QQLANEAGVSQSSVVKFAQKLGY 60 I Y L +++K ADY+LL P A S + A AG S+++ V+ AQKLGY Sbjct: 7 KVKAEITAIYDTLRGAERKAADYVLLHPQEAALHSIITESAGRAGCSEATFVRLAQKLGY 66 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ LK L A A+ ++ + I + + V + A+ TL++ + Sbjct: 67 NGYAQLKQMLLPAEAAFEPE-TLLPYGDIGRGEDSQAVLCSVFHAAARALDDTLDLLDRK 125 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 E ++ + A +I+ G G + A + K +IG A D + Sbjct: 126 VYEESLSYITRAGKILSAGAGDAYTAAYSAYLKFSRIGLRAVCPADFDVQIMEASGMKRG 185 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+LL IS++G R L A+ +++ +T + + L + + + T A + + Sbjct: 186 DVLLLISHSGSTRTLCQVAETAKAKKARIITVTNYPLSPLAKLSDCVIRTAAFTKNPCNE 245 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +++ + + + L+I+++Q E + + + ++K Sbjct: 246 TVAKRIPELCIIEALYISILQGREEKYAKMLAAANEELRK 285 >UniRef50_C8QBF9 Transcriptional regulator, RpiR family n=1 Tax=Pantoea sp. At-9b RepID=C8QBF9_9ENTR Length = 297 Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats. Identities = 57/279 (20%), Positives = 114/279 (40%), Gaps = 5/279 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L R L + ++ +A ++ P+T +S +A+ VS +S+ K A+KLG+ G Sbjct: 14 IFLLARTLAPELGRKERSIARFIDDNPETLASMSITDIADYLDVSVASITKVAKKLGFTG 73 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK+ + + + E VP + + E + + A+ L + Sbjct: 74 FHDLKMNIGKHITVSEELIDVPPVSGGEFY--TEKIVESTLYNSILALQDALKAIDIAVV 131 Query: 123 HECVT---MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 RI++ G G SG + ++F KL+KIG ++ D H L T P Sbjct: 132 KSVAALFIHRSENARIVIAGCGGSGSICEDFNHKLLKIGIFSSVFSDSHKQLMTASLMRP 191 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+LL +S++G ++ G + + +T + + L + H + + + Sbjct: 192 GDILLTVSHSGQTTDIINMTKMANDKGAETICLTNYPNSPLSHISRHAIISSVKNNPITG 251 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + + + D +F + + E + E + ++ V Sbjct: 252 ENATTRIVHLNILDAIFTIIASKTSEFSQESLHNTRNAV 290 >UniRef50_C7CRC1 Predicted protein n=24 Tax=Enterococcus RepID=C7CRC1_ENTFA Length = 270 Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 110/264 (41%), Gaps = 13/264 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + + ++ L++ + ++ DY+L + ++A VS +++ + A+ LGY+G Sbjct: 20 LIALLEKKRNHLSKIENQVLDYILTHMTEISSQTIYEVAQALFVSTATISRTAKHLGYRG 79 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK A+ +++ S+ + + + ++ A + + E K+ Sbjct: 80 FQELKYAIVQSVQSES-------------TESDSRSFQAITQQLIANVQDSFQQMDEAKV 126 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 E + M+ A I + G+G S + +FA KL +G A A D A V+ DL Sbjct: 127 AEMLKMIERANTIEVFGVGGSFPICTDFARKLTFLGKKAYARSDWDEQAAAVKNLDGQDL 186 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + +SYTG + + A ++++ + L++ ++ L+ + + Sbjct: 187 AIFVSYTGETKGILAYARVAQEQQVPMISLISTKGSTLEKLSTTTLFAKGTTRYHQRVDL 246 Query: 243 SACHAQGMLTDLLFIALIQQDLEL 266 S+ A L D + + + Sbjct: 247 SSRIAVICLFDTVLLMYAEAKQPR 270 >UniRef50_C3RR03 Sugar isomerase n=2 Tax=Bacteria RepID=C3RR03_9MOLU Length = 298 Score = 160 bits (405), Expect = 4e-38, Method: Composition-based stats. Identities = 57/278 (20%), Positives = 114/278 (41%), Gaps = 4/278 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M +I + L+QS + +ADYLL + + ++ ++LA S ++++ A+KLGY Sbjct: 1 MLIEQKIERA--RLSQSQQLIADYLLEKRSNIKDMTIKELAVATYTSTGTIIRLAKKLGY 58 Query: 61 KGFPALKLA-LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ K L E ++ + D ++ + K+ + TL + Sbjct: 59 HGYEDFKADFLKEVYYLDTHFKNIDPNFPFVKTDNIQKIASKVTLLAQETLSDTLALLEH 118 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L + + +++ A +I L I S L+ Q F +++IG N L Sbjct: 119 DNLQKALRIMQKANQIHLAAISYSLLLGQIFKLDMLRIGKNVNICNTNGEELFLPAVIKN 178 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +D ++ ISY+G L A + ++AIT N L++ A L+ E+ + Sbjct: 179 NDCIIIISYSGEIHNLCSLARTLKGRSVPIIAITSLGDNELKKYADVVLHISTREKLYSK 238 Query: 240 ASISACH-AQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + + + ++ D+L+ + R Sbjct: 239 IAGYSNENSIKLILDILYSCYFNLMYDDNLARRIAISK 276 >UniRef50_A6M3B1 Transcriptional regulator, RpiR family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M3B1_CLOB8 Length = 247 Score = 160 bits (405), Expect = 4e-38, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 104/263 (39%), Gaps = 17/263 (6%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I + + L +++ L Y+L + ++ Q L+ E S +++V+F KL Y Sbjct: 1 MTIFDTIEKNRKFLNKNENYLLKYILENIEKVSNMRIQDLSKETFTSTATIVRFCNKLSY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ K L ++ + + + + D + T ++ ++ Sbjct: 61 SGYSEFKANLRNSIDRENNHKKISDNMFLFDD-----------------IAKTKDLINDS 103 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + E ++++ A +I G G+S V + + K + N D + +T Sbjct: 104 LIDEVISIIHDAEKIDFYGEGSSKDVCIDISRKFHLVEKNCRYFNDSSIMYSTASDLDSK 163 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 L++AIS +G ++ A + G K++ +T N L + CL+ + E NS Sbjct: 164 TLIIAISMSGETSQVIKAVNIAKTRGCKIICVTSVGYNTLANLSDKCLFIFSSEYEINSI 223 Query: 241 SISACHAQGMLTDLLFIALIQQD 263 + + + +F + + Sbjct: 224 KFKSRVTANAIMEYVFFRYLDKY 246 >UniRef50_UPI000196B4B9 hypothetical protein CATMIT_00397 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B4B9 Length = 290 Score = 160 bits (405), Expect = 5e-38, Method: Composition-based stats. Identities = 59/270 (21%), Positives = 117/270 (43%), Gaps = 2/270 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + I + + + S++++ADY+L + R SS+ +A++ ++ S + +F QKLG+ G Sbjct: 1 MIEDILKEKKNMTSSEERIADYMLEKKTLLRKQSSRSIASQLFINPSMITRFCQKLGFHG 60 Query: 63 FPALKLA-LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + L E ++ ++ ++ D ++ K+ + + TL + S + Sbjct: 61 YTDFLEEYLKEIEYTESHFQNLDPNHPFDNQDKNTVIANKIGQLYHEIVDDTLKLISHDA 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + L + I + G G VA+ F K++KIG N M+ L + Sbjct: 121 LQNAINCLNKSDIIYVYSAGVQGDVAETFKDKMLKIGKNVVLETKMNELYYRASYCPLNC 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA-TNSA 240 + ISY+G ++ +LAIT + N L Q A + L E+ N Sbjct: 181 TFIIISYSGEIETELRGVKKLKERHIPLLAITSYGDNTLSQYADYILNVSTREKLKDNLG 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPER 270 + + ++ D+L++++ D ER Sbjct: 241 DFAMNISTMLILDILYVSIFNTDYSTHVER 270 >UniRef50_C3RM54 Putative uncharacterized protein n=2 Tax=Bacteria RepID=C3RM54_9MOLU Length = 273 Score = 160 bits (405), Expect = 5e-38, Method: Composition-based stats. Identities = 51/278 (18%), Positives = 120/278 (43%), Gaps = 16/278 (5%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I Y+ L +K +A+Y + Q + LSS+ ++ VS++S+ +FA+KLG+ Sbjct: 7 SVIPIIESAYEELTNVEKNIANYFIDQVED-EDLSSKAVSQRLYVSEASLSRFAKKLGFS 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ A ++ S L L+ ++++ + T ++ ++ Sbjct: 66 GYRQFLFAYQDSHQSSRH---------------LDLLTKQVLNSYQKVLEKTYSLIDNDQ 110 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + ML R+ + GIG+S +VA+ F + M++G + + + H++ + + + Sbjct: 111 MVRIAKMLDEYNRVYIYGIGSSSVVAREFKLRFMRLGLDVDYLAESHSIRMNITRVNQES 170 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++ IS +G E+ E G K + ++ + + + S Sbjct: 171 LVIGISVSGKTEEVIEGLREAKEKGAKTIMLSAARVYEYRSYYDELILIGGLKNLAISDK 230 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 IS ++ D+L+ + + + E+++ + + Sbjct: 231 ISPQIPALIVVDILYSHYLNYNNDNKKEKLQMTLEHIN 268 >UniRef50_C0BYY2 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BYY2_9CLOT Length = 280 Score = 160 bits (405), Expect = 5e-38, Method: Composition-based stats. Identities = 60/275 (21%), Positives = 113/275 (41%), Gaps = 8/275 (2%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 + +++AD L+ + + S +A ++ VS +SV +F Q LGYK F A + +L E Sbjct: 2 HFNPAMRRIADILITDTQSLLNCSIGDIAEKSNVSAASVTRFVQILGYKNFKAFRQSLQE 61 Query: 73 ALASQPESPSVPIHNQIRGDDP-LRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 L + + SV + + +I+ + TL++ + + + S Sbjct: 62 YLLAGQDQLSVTSSEIAMSESSAPESICNYVIQSEIEMLRDTLSLMDFPTMDKVAKKICS 121 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGV 191 AR +I G G S + AQ+ + ++G + D H++L + + P+DL++ IS G Sbjct: 122 ARHVIFIGEGRSYIAAQSACNRFDRLGILCSCYGDPHSMLPAIGMAQPEDLIVGISNFGH 181 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT-------IAEEQATNSASISA 244 R + G +AIT + L Q+A + T + + +S Sbjct: 182 SRPVVNCIKYAREHGVPTVAITSSQDSPLAQQAESLIITGFNYNNLANQGEIICYEPMSE 241 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 Q L D L++ + R L++ Sbjct: 242 NLPQFSLIDCLYLIAGNYQSKERVNRYYECTRLIE 276 >UniRef50_D0KI21 Transcriptional regulator, RpiR family n=84 Tax=Gammaproteobacteria RepID=D0KI21_PECWW Length = 285 Score = 160 bits (404), Expect = 6e-38, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 104/279 (37%), Gaps = 10/279 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +IR+RY L++ +++A Y+L ++ + +A A V S++++FA + G Sbjct: 10 LQEQIRERYDSLSKRLQQVAHYVLDNTNSIAFDTVAVIAERADVPPSTLIRFANAFDFSG 69 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGD-----DPLRLVGEKLIKENTAAMYATLNVN 117 F +K L + S + + + + + + N AM Sbjct: 70 FNEMKQLFRMNLVEETASYTDRARLFRAMEADAVPETPLDILHEFARSNAQAMQQLAART 129 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQA 176 ++ L + V +L A I + G+ S VA + L + N V + Sbjct: 130 PQDDLQKAVDLLAQAETIYIVGLRRSFSVATYLTYALSHLESNPILVNGLGGMFREQLSR 189 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 + D +++IS++ +E + ++ + G + + IT + L + C + Sbjct: 190 VNSRDAVVSISFSPYSQETVMVSEMAAKAGARQIVITDSQISPLATLSDVCFVV----KE 245 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 + + A L L ++L + + + Sbjct: 246 AQVDAFRSQSATLCLVQSLMVSLAYRQGNGTEQSEKQRR 284 >UniRef50_B9DT48 RpiR family regulatory protein n=1 Tax=Streptococcus uberis 0140J RepID=B9DT48_STRU0 Length = 265 Score = 160 bits (404), Expect = 6e-38, Method: Composition-based stats. Identities = 52/266 (19%), Positives = 106/266 (39%), Gaps = 2/266 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L R ++ + +++ + DYL + L+ QLA S +S+++ QK GY Sbjct: 1 MTILSRFAEK-ENFTPTEQLIIDYLQSHQEELESLTIGQLAKGTFSSNASIIRLCQKCGY 59 Query: 61 KGFPALKLALSEA-LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 +GF +LAL +S+ V + + + + L +++ ++ Sbjct: 60 QGFRDFRLALVSELTSSRYLGKIVDFSRPFQIKESSQEMVNSLFSLYKSSIDQVQSLLDI 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 +L E + + R+ L G G L ++F+ KL+KI + + V + Sbjct: 120 PQLEEMAEQIAQSNRLFLFGYGDVKLTLKSFSNKLVKINYFPIMATENEEEHEIVPHITN 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+ L +SY G ++ + R G IT + L + L E+ Sbjct: 180 GDVALFVSYRGKNEKMAQHIVSLRRQGVATFVITANQKSPLLPYSKGYLLIPDLEKEDKI 239 Query: 240 ASISACHAQGMLTDLLFIALIQQDLE 265 + + + L +L++ L ++ + Sbjct: 240 GTFYSQLSFDYLLNLIYTFLYKKHYD 265 >UniRef50_C0Q155 Protein rpiR n=2 Tax=Salmonella enterica RepID=C0Q155_SALPC Length = 293 Score = 160 bits (404), Expect = 6e-38, Method: Composition-based stats. Identities = 53/270 (19%), Positives = 114/270 (42%), Gaps = 5/270 (1%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 L + ++ +A ++ P T ++S +A+ VS SS+ K ++KLG+ GF LKL++S Sbjct: 19 PELGKKERAIARFIHDNPQTLSNMSITDIAHYLKVSVSSITKVSKKLGFTGFHDLKLSIS 78 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 + + + ++ +P+ + + E + + A+ LNV + + Sbjct: 79 KNINNNEDTVDIPVIPDSE--GFIEKIFESTLLNSILALQEALNVIDCSIIKSVAWLFIH 136 Query: 132 AR---RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 +I + G G S + +F KL+KIG + D H L + D+LLA+S+ Sbjct: 137 KNAEAKIFIAGCGGSASICDDFNHKLLKIGIFSTVFSDSHKQLMSASLMRQGDILLAVSH 196 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 +G ++ + G + + +T + + L H + + + + + Sbjct: 197 SGQTSDIIQMVNIANERGAETICLTNYPNSPLSLICRHSIISAVKNNPITGENATTRIVH 256 Query: 249 GMLTDLLFIALIQQDLELAPERIRHSEALV 278 + D +F + + E+ + + V Sbjct: 257 LNILDAIFTIIASKTSEITKNSLLSTRNAV 286 >UniRef50_C3RKL9 Sugar isomerase n=3 Tax=Bacteria RepID=C3RKL9_9MOLU Length = 294 Score = 160 bits (404), Expect = 7e-38, Method: Composition-based stats. Identities = 56/280 (20%), Positives = 106/280 (37%), Gaps = 3/280 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + ++ + S+ + DY+L Q +++S+ +A S +V+ A+KLGY Sbjct: 1 MLIIHKLEHT--HFSSSEAIIIDYILEQGLKIKNMSANSIAKATFTSAPLLVRIAKKLGY 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ A K L + V D + + + + A+ T+++ + + Sbjct: 59 SGWNAFKEDFIAELEYLFKEQKVDASIPFVVSDDIMTISNNIGQLQIDAIQDTMSMLNHD 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + LR+A+ + L G+ + L+A+ F KL I N R S Sbjct: 119 DLQTALRYLRNAKELDLYGVSNNLLLAEGFRSKLFYIHRNVNICRLPGNPKVQAAMSDET 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-NS 239 + ISY+G + A + + ++AIT N L + A L + E Sbjct: 179 HCAILISYSGETEFIIEVAKVLKKKETPIIAITCIANNRLSKIADVTLRISSREMLHTKI 238 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + + L D L+ + D + + V Sbjct: 239 GDFATTTSIKYLLDTLYAGIFSFDYQKNLDYKIQIAKAVD 278 >UniRef50_C9Q9L7 Helix-turn-helix protein RpiR n=6 Tax=Vibrio RepID=C9Q9L7_9VIBR Length = 281 Score = 160 bits (404), Expect = 7e-38, Method: Composition-based stats. Identities = 64/259 (24%), Positives = 122/259 (47%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + +++ Q+++KL+ ++ + LS+ ++ G+S SSV+++A+ LG Sbjct: 3 KLINKVKTLVHSSNQNEQKLSQLIVERQFDLSELSATKVGALLGISDSSVIRYAKSLGCS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GFP LKL L+ + ++ I D + EK + + ++ + E Sbjct: 63 GFPDLKLKLAAQAPQVMARTAQSVYASIETGDSTAQIIEKAKHLFVSTIEQSIGLMDAES 122 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + +C L A +I L GIGAS +VA + KL++ GFN +D H + DD Sbjct: 123 VEQCAQQLLKANKIALAGIGASAIVAADINHKLIRAGFNVQFNQDYHIQIVQASLLKADD 182 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +LL +S G +E+ A + + G +V+A+T + + + Q A + + E+ + Sbjct: 183 VLLVVSARGNTQEVLTAIERAQQNGAQVIALTRYGRDKVAQLADYVIPYSYTEEHSQLGM 242 Query: 242 ISACHAQGMLTDLLFIALI 260 ++ Q D++F LI Sbjct: 243 VTPQLLQMAAFDIVFFKLI 261 >UniRef50_C2MLM8 Transcriptional regulator n=1 Tax=Bacillus cereus m1293 RepID=C2MLM8_BACCE Length = 280 Score = 159 bits (403), Expect = 7e-38, Method: Composition-based stats. Identities = 57/279 (20%), Positives = 112/279 (40%), Gaps = 6/279 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ I+Q Y L++ +K+A YLL QP + ++ + GVS+++V++F + Sbjct: 1 MDLKKIIQQEYNQLSKGQQKVAKYLLEQPGEFAVKLASEIGEQVGVSETTVIRFCYSIKL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF L+ + E L S +++ + K+++ + + T+N E Sbjct: 61 SGFSELQKMVREQLLLMQSSLGQYFSSKLELAEQPH-FYAKVMERDCQYIQQTINNIDEN 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASSP 179 ++ + V L +I + G+ +S A L + N + + LL T+ Sbjct: 120 EIEQVVDQLIKTEKIYVLGLKSSFSAANWLTMTLGLVRGNVQILHPETNDLLCTLSEMDH 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 L+ IS+ +E A+ G V+ IT +++ A + E++T Sbjct: 180 RSTLITISFHRYLKETIKVAEMAKEQGAFVIGITDSPLAPIREYADAIFSMYSSERST-- 237 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 I A + + + +D E +R E L Sbjct: 238 --IDATPVLFSFLNAIVAGVSIKDKERFEKRKDRYEKLN 274 >UniRef50_A6DTP0 Putative transcriptional regulator, rpiR family protein (Fragment) n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DTP0_9BACT Length = 262 Score = 159 bits (403), Expect = 8e-38, Method: Composition-based stats. Identities = 56/254 (22%), Positives = 107/254 (42%), Gaps = 6/254 (2%) Query: 27 LQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIH 86 + A + S +A +AGVS++SV +F++ +G K P LK AL + A + Sbjct: 1 SDLEWAGNASIHDMAAKAGVSEASVTRFSRSVGCKNVPDLKKALVSSFAIGQRFLEGHMD 60 Query: 87 NQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGA-SGL 145 + V + +I+ T K+ + +++ R+++ G G S + Sbjct: 61 PITEESGAIGQVVKGIIEALNTVNTQTSQQ----KIEQTASLVNELERVVVFGSGGGSTV 116 Query: 146 VAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRV 205 +A + ++ + G N + D + D L+L IS TG E+N +A + Sbjct: 117 IADDAVNRMFRFGVNITSYGDFLMQRMVAATLNEDSLVLVISTTGQIAEINESAQIAKQY 176 Query: 206 GGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLE 265 G KV+AIT + L Q A L +E + ++ +A + D + + L + Sbjct: 177 GAKVVAIT-RGDSPLAQLADIHLEVHIQEDEGIYKATASRYALLAVIDAIALELAVLRKD 235 Query: 266 LAPERIRHSEALVK 279 + E +R + + Sbjct: 236 SSKETLRRIKYNLD 249 >UniRef50_Q89XK4 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89XK4_BRAJA Length = 318 Score = 159 bits (403), Expect = 9e-38, Method: Composition-based stats. Identities = 57/246 (23%), Positives = 106/246 (43%), Gaps = 4/246 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + IRQ L+ S++++A LL + A H S+ +LA A VS+ +V +F++ +G + Sbjct: 30 DIISVIRQSAPSLSPSEQRVAMALLADVEFAIHASNAELARSARVSEPTVTRFSRSVGCR 89 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G LK+ L++A+A +P H + D + + +E A+ A +E Sbjct: 90 GVRDLKVRLAQAMAVGRIYVELPPH--VGTDLARPALWRSVFQEIRRAIAAAEEGLRKED 147 Query: 122 LHECVTMLRSARRIILTGI-GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + ++ G+ G S L A + ++G + D + + Sbjct: 148 IERAAEAISRCSKLAAFGVGGGSTLAAMEVQNRFFRLGIAVSHTSDPSLMRMIAATLGEE 207 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++AIS TG E+ AA + G V+AIT + L A L E Sbjct: 208 DVVVAISTTGAASEVIEAAGIAKQYGALVVAIT-RPQSRLASIADIALGVHVPEAPDALK 266 Query: 241 SISACH 246 ++ + Sbjct: 267 PTASRY 272 >UniRef50_B0N5H7 Putative uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N5H7_9FIRM Length = 264 Score = 159 bits (402), Expect = 9e-38, Method: Composition-based stats. Identities = 44/265 (16%), Positives = 116/265 (43%), Gaps = 3/265 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + + + +S+ ++ +++ P+ +++ +LAN+ S +++++ +KLG+ Sbjct: 1 MSLIDNL-SNEKLFTKSEIEVINFIKENPNLVLNMTIGELANQTFSSNTTIIRICKKLGF 59 Query: 61 KGFPALKLA-LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 GF K+ L + + + + ++P + + ++ + + Sbjct: 60 NGFRDFKIEYLRNIESLKYLNNETDFTLPFQENEPTWQIINSISNVYKDSINLINSELNI 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 +L + V +L ++ R + GIG S + A NF KL+KIG + + + + + Sbjct: 120 AELEDIVEVLDTSPRTFVFGIGDSKITAMNFINKLVKIGKFFILTTENNEQESFCKGITK 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD L I+Y + + K++ IT N L + +++ + +E+ Sbjct: 180 DDCCLFITYD-KNESYKACLKILFQKRCKIIVITSNCDNPLVKYSNYHIIIPHKEKDEKI 238 Query: 240 ASISACHAQGMLTDLLFIALIQQDL 264 A+ + A + +++ + +++ Sbjct: 239 ATFYSQLAFNYILSIIYSLIYKRNK 263 >UniRef50_B1Q8U9 Putative phosphosugar-binding transcriptional regulator n=1 Tax=Clostridium botulinum NCTC 2916 RepID=B1Q8U9_CLOBO Length = 291 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 59/281 (20%), Positives = 119/281 (42%), Gaps = 4/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M ++ + S+K + DY+L ++ + ++++ E ++ S+ ++ ++KLGY Sbjct: 1 MLLTEKLLNT--KFSPSEKIIVDYMLKHKYDIKNKTIKEISKETFINPSTFIRISKKLGY 58 Query: 61 KGFPALKLA-LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 KG+ LK L+E ++ + +D + KL K N + TL++ S Sbjct: 59 KGWNELKEKYLNEIKYLDSNFENIDANIPFDKNDSYISISNKLGKLNEITIKDTLSLLSN 118 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L V +L SA I L S L++Q+FA K+ +I + + Sbjct: 119 DDLKNAVEILNSASDIKLFANNESILISQDFALKMNRIKKYVSICTVDGEQVFEAFNCRK 178 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN- 238 + + ISY+G + L + + +LAIT N L A+ L E + Sbjct: 179 NSCAIIISYSGETKRLLETIPILKKYNIPILAITSLGNNTLANNANCVLRITTREHLYSK 238 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ ++ ++ + D+L+ + ++ E LV Sbjct: 239 ISNFTSNNSICFILDILYSCIFSKNFEKNLIHKIKVSKLVD 279 >UniRef50_B2UF98 Transcriptional regulator, RpiR family n=2 Tax=Ralstonia pickettii RepID=B2UF98_RALPJ Length = 287 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 68/279 (24%), Positives = 116/279 (41%), Gaps = 6/279 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +R + L+ + + +A +L P+ + S + LA AGVS ++V+ Q LG++G Sbjct: 8 LLNALRAQLPALSPAQQGVARLILDAPELSLEQSVETLAVRAGVSMPTIVRMCQALGFEG 67 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 K L+ LA + + DP LV K+I T A+ S ++ Sbjct: 68 LREFKATLAAELAHAQPTLPGH----VGRADPPALVASKVIDGATRALAKLRESLSTTQV 123 Query: 123 HECVTMLRSARRIILTGIG-ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + ARR+ G AS +A + +LM++G + A D H L + D Sbjct: 124 DAAAERIARARRVDCYAAGAASSFMANDMQARLMRLGLASNAYFDAHLQLVSAAMLGASD 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++A S+ G L + G V+AIT L +RA L E A Sbjct: 184 VVVAFSHVGRMPYLLESIAYAAEQGACVIAITQ-AGTPLAERAQIALTVDVPEDAVMRVG 242 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A + ++L + Q+ E+ R+R + L+ + Sbjct: 243 TEAYLVHLTVIEILMTCVAQRRDEMVRSRMRAIQRLLTE 281 >UniRef50_B9DVM9 RpiR family regulatory protein n=2 Tax=Streptococcus RepID=B9DVM9_STRU0 Length = 295 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 51/281 (18%), Positives = 116/281 (41%), Gaps = 4/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M +I + S++K+ D++L + + S+ Q+A E S+S++V+ AQKLG+ Sbjct: 1 MFINEKIE--LSAFSPSEQKVVDFILKEKEHISEWSTSQIAKETYTSKSTLVRIAQKLGF 58 Query: 61 KGFPALKLALSEALASQ-PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ + + A E + ++ + + D + KL + TL+++ Sbjct: 59 SGWTSFRQAFHEEVTYLLKQADAHDANLPFDKTDNNLEIASKLAHLKKEVIDETLHLSRN 118 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L++ + ++ AR + L + + FA + +I + + + Sbjct: 119 KDLNKAIHLISHARTVHLFAASNNLHNGREFAHNMKRIQKDVQLHDLHGEIHFDALLAEE 178 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D + ISY+G L A + + ++A+T N + Q + L +E+ + Sbjct: 179 DSCAIIISYSGGTLSLIKVAQILRKKEIPIIALTSLGDNPISQLSQVTLRLSTKEKLYSK 238 Query: 240 ASISAC-HAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 A + + DLL+ +Q+ + + + ++ Sbjct: 239 IGTYATDTSITFILDLLYSIYFRQNYDYNLAFRQKTSQEIE 279 >UniRef50_C6JFN2 Transcriptional regulator n=3 Tax=Clostridiales RepID=C6JFN2_9FIRM Length = 275 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 54/281 (19%), Positives = 107/281 (38%), Gaps = 14/281 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + I Y ++ +AD+ + + + SS+ ++ VS++S+ +FAQK G+ Sbjct: 7 KIIPLIESYYHTFTPLERTIADFFIHNTEE-QDFSSKNISGLLYVSEASLSRFAQKCGFH 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ ++LA PE + + + + + Sbjct: 66 GYREFIYEYKQSLAPGPEENIPNFEVSE-------------FNTYQELLNKSNALLDKAQ 112 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + +L S R+ + G G+SGLVAQ + M+IG N AV D H + + Sbjct: 113 ITRITNLLVSKPRVYVYGRGSSGLVAQEMKLRFMRIGLNIEAVTDSHIMKVNSVILDENC 172 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++ IS +G ++ + + G L +T + Q L + E Sbjct: 173 LVIGISVSGQTDDIISSLKAAHQHGAYTLLMTARQDKSYQDFCDETLIFASMEHLEYGNI 232 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 IS ++ D+L+ +Q D ++ ++ + Sbjct: 233 ISPQFPILLVLDVLYAHYLQIDRSKKEALHEYTIQTLQPFL 273 >UniRef50_B2IRS9 Phosphosugar-binding transcriptional regulator, putative n=36 Tax=Streptococcus RepID=B2IRS9_STRPS Length = 283 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 55/280 (19%), Positives = 111/280 (39%), Gaps = 13/280 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + I ++ + ++++A Y L LSSQQ+ + +SQ+++ +FA+K G+ Sbjct: 5 DIATVIDSHFEEMTDLEQEIARYFLQAETIQDDLSSQQVTQKLHISQAALTRFAKKCGFT 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ +Q S + +++++ + T ++ E + Sbjct: 65 GYREFIFQYQHEAENQANQVSKHSP-----------LTKRVLRSYSNMREQTQDLIDEVQ 113 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L ++ A R+ G G+SGLVA+ + M++G A+ D T + Sbjct: 114 LERIAQLIEDAERVYFFGTGSSGLVAREMKLRFMRLGVVCEALTDQDGFAWTTSIMDENC 173 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L+L S +G + + + +G K + + Q + + Q + Sbjct: 174 LVLGFSLSGSTPSILDSLLDAKEMGAKTVLFSSVPNKD-SQAYTETVLVATHSQPSYIQR 232 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ISA DL++ A + + E+I +S KKL Sbjct: 233 ISAQLPMLFFIDLIY-AYFLEINRESKEKIFNSYWENKKL 271 >UniRef50_C0EW96 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EW96_9FIRM Length = 306 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 56/282 (19%), Positives = 121/282 (42%), Gaps = 9/282 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L RI ++ ++ ++LA Y+ D A +L++ +L EAGVS+S+VV+FA +L Y+ Sbjct: 22 NLLQRIEKKSSEFSKGQRRLAQYITENYDIAAYLTASKLGKEAGVSESTVVRFAYQLDYE 81 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNV-NSEE 120 G+P L+ A+ + + S + R + V + ++ ++ + T+ EE Sbjct: 82 GYPELQKAIQVIVKTNSNSIQRMSLSSKRYQEKG--VLKSILYTDSERLRDTIQSGVDEE 139 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM--HALLATVQASS 178 + + V ++ ARR+ + G ++ +A + + N V L + S Sbjct: 140 EFNRSVMLINDARRLYILGARSAAYLAGLMGYYFKMMFDNVIIVDANSTSETLEQIYDIS 199 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D+++ I++ + A G K +A+T + + + A L ++ Sbjct: 200 DKDVMMGITFPRYSKRTICALQYAKNHGAKTIALTDNMQSPIVEYADCKLIAKSDVMTI- 258 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + + + + A+ + +R+ E L + Sbjct: 259 ---VDSLVCPLSVVNAMVTAIALLRKDDVEKRLMALEELWNE 297 >UniRef50_C8NE33 RpiR family phosphosugar-binding transcriptional regulator n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NE33_9LACT Length = 273 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 54/278 (19%), Positives = 108/278 (38%), Gaps = 15/278 (5%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + I Y L +K +A Y L LS+Q+++N VS S+ +FAQK GY Sbjct: 9 KVVPIIESIYDTLTPIEKTIAQYFLEPIPEGVSLSAQEVSNRLFVSIPSLTRFAQKCGYN 68 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + + + ++++ + + ++ +E + Sbjct: 69 GYRQFIYDYEKRSKEESTLHINST--------------KIVLEDYAELLSKSFSLVNEAQ 114 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L +L SA+R+ + G G+SGL A ++ M++G A+ D+H +L D Sbjct: 115 LIRVCELLSSAKRVYIYGQGSSGLAALEMKFRFMRLGMICEAITDLHTMLMNRVLVDEDC 174 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++ I+ + + A + G K + IT L + + + Sbjct: 175 LVIGITVS-ANESVVKAVNIAKNQGAKTVLITSKKSEELSHECDELVLIAMKNALEQGTT 233 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 IS ++ D+L+ + D E ++ ++ Sbjct: 234 ISPQFPVLVVVDILYSYYKEIDKERKHSIFSNTLHAIQ 271 >UniRef50_UPI0001C36367 transcriptional regulator, RpiR family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36367 Length = 299 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 114/268 (42%), Gaps = 3/268 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +++ R +G ++ +A Y+L + + +S+++LA + S+++VV+ +KL G Sbjct: 2 ILEKLK-RMEGFTHQEQAVARYILEHVEEIQQMSTEELARVSYTSKATVVRLCKKLDTAG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + LKL L L + I L+ + L K A+ T + + Sbjct: 61 YQELKLKLVSELVQNIRVNQLLNREPITETSTLQDILHTLPKLYDKAITDTELCMDKNVI 120 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 +R++ RI + G G S ++AQ+ A+K +G AA ++A + + + Sbjct: 121 KRICNRIRTSDRIDIYGNGISYILAQSAAFKFATLGMECAAYDSVNAHFLSAGK-TKKTV 179 Query: 183 LLAISYTGVRRELNLAADEMLR-VGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 I++TG + + A + V+ I G +++ + + + + Sbjct: 180 SFVITFTGANKSMIDTARYLKETTETYVVGIVGRHNEEIRKWCHEIVEIPSRDSLLSLKV 239 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPE 269 I++ A + D+ F L+ Q E + Sbjct: 240 ITSFTATTYVLDIFFSMLLAQTYESHVK 267 >UniRef50_UPI0001BC57B3 oxygen-independent coproporphyrinogen III oxidase n=2 Tax=Fusobacterium RepID=UPI0001BC57B3 Length = 538 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 67/254 (26%), Positives = 137/254 (53%), Gaps = 3/254 (1%) Query: 28 QPDTARHLSSQQL-ANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQP-ESPSVPI 85 + +++ A +++V+F++KLG+KGFP KL+LS+ + ++ ES + Sbjct: 281 NKRDVLNSIEKEMKAENIYQGGTNIVRFSKKLGFKGFPDFKLSLSQDIGNRKAESHVNIM 340 Query: 86 HNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGL 145 H +I+ D ++G+K+ ENT A+ T + ++L + V M+ AR+I+L G+G SG+ Sbjct: 341 HEEIKPTDTFEIIGKKVATENTMAVNNTYEITDFKELEKAVKMISEARKIMLAGVGFSGI 400 Query: 146 VAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRV 205 VA++F +KL+++G D H L+ + + +D+L IS++G E+ A Sbjct: 401 VAKDFHFKLLELGKQTLFENDTHMQLSYLATMNENDVLFVISHSGKTLEVFNLAKAAKNR 460 Query: 206 GGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLE 265 K++ +T + +++ L T+ + + ++S +Q + D+++I L+ ++ E Sbjct: 461 KVKIITLTSVVQSPIRELGDIKLSTVEMKSDFRATALSPRISQLTVIDMIYIKLMLEN-E 519 Query: 266 LAPERIRHSEALVK 279 + I ++ LVK Sbjct: 520 DLQDYIFNAIELVK 533 >UniRef50_Q21ZX8 Transcriptional regulator, RpiR family n=4 Tax=Comamonadaceae RepID=Q21ZX8_RHOFD Length = 310 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 61/279 (21%), Positives = 112/279 (40%), Gaps = 6/279 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L RI + S + + +L P S +QLA+ AG S +V++ + LGY Sbjct: 4 KVLARIAETMAHAPTSRRSVLAMILQDPQRVLDESFEQLAHRAGSSVPTVMRTCRDLGYP 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G KLAL++ LA +H +++ D + V K+I+ A+ + Sbjct: 64 GLREFKLALAQELAVSGSP----LHRRVQLHDGAQEVISKVIRGAATAVSGVQAQLGVAE 119 Query: 122 LHECVTMLRSARRIILTGIG-ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + A R+ +G S +A + +L ++G + A D+H L + Sbjct: 120 VEAAADAIVRASRVDCYSVGVTSSFMASDMQARLFRLGLVSNAYLDIHLQLVSAATLGTQ 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 ++ AIS+ G L A D G V+A+T L + A L E Sbjct: 180 GVVFAISHVGGMPSLIEAVDVAHSQGATVIALTQ-QETELAKHADIVLGIHVPEDPIMHV 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 A + +++ + + Q+ +LA +R+ ++ Sbjct: 239 GTEAYLVHLTVIEIVTVLVAQRLGDLAVKRLGGVREVLS 277 >UniRef50_C3RJC3 Sugar isomerase n=5 Tax=Bacteria RepID=C3RJC3_9MOLU Length = 291 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 52/266 (19%), Positives = 117/266 (43%), Gaps = 2/266 (0%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 + S++ + D++L + + + S+ +A E S S +V+ ++KLG+ G+ K A E Sbjct: 5 KFSPSEEIVIDFILTKQERIKDYSTTMIAGETYTSPSLLVRISKKLGFSGYNNFKNAFLE 64 Query: 73 ALASQPESP-SVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 + +S ++ + D + + K+ + T ++ TL++ + L + V L+ Sbjct: 65 EVQYLHKSHLNIDANQPFLKTDSIMNIANKITQLKTESLNDTLSLIHHDTLQKAVRALQK 124 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGV 191 + + + G+ A+ F +KL IG NA + ++ +DL + +SY+G Sbjct: 125 SNTVKVFGVSNLSFPAEEFVFKLRHIGKNAEVFVLNSNIYQEAMMANSNDLGICLSYSGE 184 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN-SASISACHAQGM 250 E+ A+ + + ++AIT N+L + A L E++ + + S+ + + Sbjct: 185 SGEIIKIANILKKKNVPIIAITSIGENSLTRLADIVLRVTTREKSYSKIGAYSSLESISL 244 Query: 251 LTDLLFIALIQQDLELAPERIRHSEA 276 + D+L+ + Sbjct: 245 ILDVLYSCFFTTAYDQHYTFKTELAK 270 >UniRef50_A0ZNS9 Putative uncharacterized protein n=3 Tax=Photobacterium RepID=A0ZNS9_PHOPO Length = 277 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 95/270 (35%), Positives = 141/270 (52%), Gaps = 8/270 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + +I L+ S +K+A +L QP LSS QLA +A V QSS+VKF QKLG+ Sbjct: 1 MTIIAKIANIKSQLSPSAQKIAALILQQPAAVVSLSSLQLAQQANVGQSSIVKFTQKLGF 60 Query: 61 KGFPALKLALSEALASQPE--SPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 GFPA K A+ E LA Q + + NQI D L + +KL + T A+ T N Sbjct: 61 TGFPAFKNAIKEELARQQAIGNDPQQLQNQISHSDTLITIAQKLAHQKTDAIIETTNAID 120 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 E+ L + + +A+RI L G G S ++A++F+ KL+ +G A A +D + + + Sbjct: 121 EQNLKNIIALFINAQRIQLVGFGHSAIIAKDFSTKLLTLGMMAIAEQDSRSQIDIAKTLG 180 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT- 237 P D+ I Y G ++ L A G ++A+T L+Q A L T+A E + Sbjct: 181 PTDIQCHICYDGNHQDALLTAHSAKMKGATLIALTSPHSTPLRQLAQFSLDTLAIETSNH 240 Query: 238 -----NSASISACHAQGMLTDLLFIALIQQ 262 ++ SI++ AQ LTDLLF+AL Q Sbjct: 241 RQYQPHNYSIASHAAQQTLTDLLFMALTHQ 270 >UniRef50_A4XR90 Transcriptional regulator, RpiR family n=2 Tax=Pseudomonas RepID=A4XR90_PSEMY Length = 309 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 61/268 (22%), Positives = 108/268 (40%), Gaps = 8/268 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L ++ + L S +K+AD++L P A L+ ++LA S ++V + A+ + +G Sbjct: 16 ILRKLAEVAPQLQPSLRKVADFILRHPLKAATLTIEELAQATHTSPAAVNRLAKAMELRG 75 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + +LK L L + D + E+ ++ ++ + A + N Sbjct: 76 YISLKAELVATLQDMVSPVDKLRDELAQRPDGAFGLHEQ-LQIASSNLGAAASNNDAAVF 134 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD---MHALLATVQASSP 179 + L ARRI + G G S +A A L+ +A A+ + A + Sbjct: 135 EAVIGRLLGARRIYILGFGNSAYMAGLAAANLVPFCDDATAISMEGGNENAAYRLAAITE 194 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+LL IS + A G VLAIT + L + A + L+ AE Sbjct: 195 RDVLLTISLPRYSLDTLQLARFARERGACVLAITDSPASPLVEIAEYSLFAPAEHPVL-- 252 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELA 267 IS+ A L + L ++ ++ E Sbjct: 253 --ISSNAAVLALIEALVAGVMARNKEAV 278 >UniRef50_B3EUN5 Transcriptional regulator, RpiR family n=1 Tax=Bordetella bronchiseptica RepID=B3EUN5_BORBR Length = 303 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 59/280 (21%), Positives = 114/280 (40%), Gaps = 6/280 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L ++++R L+ + K + +L P A + +QLA +AGVS ++V+ + G+ Sbjct: 7 NLLQQMQERSPELSPAQKMVVRVILDDPQAAVLATVEQLAQKAGVSMPTIVRTCRSFGFV 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 +AL+++ A+ S +H + DD + V K+I +++ Sbjct: 67 SVRDFMVALAQSYAAT----SSLLHRSVLADDGVADVSSKVIHAAISSLSELDRDLDVVI 122 Query: 122 LHECVTMLRSARRIILTGIG-ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + + A RI +G AS +A +L ++G + DMH L + Sbjct: 123 LDKVAERVAQAERIDCYSVGAASTFIAHELHSRLFRLGLRSNTFFDMHQQLMSASTLGAK 182 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 + IS+ G AA G V+A+T L A L + Sbjct: 183 GVAFVISHVGRMPYTLEAARYAREHGATVVALTQ-PGTPLAAAADLVLAVSGPQDPLRRV 241 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A ++ ++L + L Q+ +A ++ + L+++ Sbjct: 242 GTETQLAHLVVIEILMVRLAQKLGPVAVHGLQGFKQLLQQ 281 >UniRef50_A6M2X4 Transcriptional regulator, RpiR family n=4 Tax=Clostridiales RepID=A6M2X4_CLOB8 Length = 286 Score = 157 bits (396), Expect = 5e-37, Method: Composition-based stats. Identities = 65/282 (23%), Positives = 125/282 (44%), Gaps = 3/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I+ L Q++ LA Y++ + LS QQL+ + VS+S++ +F +K+G Sbjct: 1 MTIENMIKCC-DKLTQTENILAQYIIKNKNEISTLSIQQLSEKTFVSKSAIHRFCKKIGV 59 Query: 61 KGFPALKLALSEALASQ-PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 GF LK+ +++ +A + + ++ D ++ +KLIK + T Sbjct: 60 DGFNELKVKVAQDIAEESKIENDIDVNFPFLEGDTQGVIAQKLIKLYETTIRDTYKYIDV 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 EKL+ CV++L A I + + VA+NF K+ IG + + T AS Sbjct: 120 EKLNTCVSILHKADVIDIYTHAHNSNVAENFMDKMRSIGRMVNCTKSFYDQRCTATASKK 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ-ATN 238 + L +SY+G L ++ + + G + + I +++ + H LY E Sbjct: 180 NHAALLLSYSGKSNFLKPISEVLYKRGIETIWIGRVGSSSVPEYIKHRLYISDRENFKNR 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + S+ A + DL++ + ++D + I+ +V Sbjct: 240 ISQFSSHIAMQYMLDLIYSCIFKRDYNDNIKYIKEIANIVDN 281 >UniRef50_D1BBP1 Transcriptional regulator n=2 Tax=Micrococcineae RepID=D1BBP1_SANKS Length = 290 Score = 157 bits (396), Expect = 5e-37, Method: Composition-based stats. Identities = 55/275 (20%), Positives = 111/275 (40%), Gaps = 9/275 (3%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 RI L +++++ D +L A ++Q++A+ AGV++SSV++ Q+LGY+G+P Sbjct: 19 RIATVRNTLQPTERRVVDLVLDDVAGAVEATAQEIADRAGVARSSVIRTCQRLGYRGYPQ 78 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 L++AL+ D ++ A + +V ++++ Sbjct: 79 LRVALARE--------LASGAEPSTHPDTAVGRVRTHVESLAATLPQITSVLDDDQVERA 130 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 VT+ A R+++TG G S +A + A +L +G V D + DL L Sbjct: 131 VTLCVGAGRVLVTGNGLSSPLAADLALRLTAVGRPTECVADPIGQQIAAAQLTSADLCLV 190 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA-SISA 244 +S +G A G V+ +T F + L A L + + ++ Sbjct: 191 VSGSGASESSLRVARAGRAAGVTVVVLTSFVESPLTALADVALVVGPAAGSFRAELEHTS 250 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ + L + + E + + ++ Sbjct: 251 RVPHAIVLEALVEVVADRLGERSRQVRSRVLDVLS 285 >UniRef50_A8F424 Transcriptional regulator, RpiR family n=1 Tax=Thermotoga lettingae TMO RepID=A8F424_THELT Length = 282 Score = 157 bits (396), Expect = 5e-37, Method: Composition-based stats. Identities = 45/279 (16%), Positives = 114/279 (40%), Gaps = 9/279 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + +++ +++S ++A +++ P +++ +LA S S+VV+F++KLG+ Sbjct: 4 SVFQKMKDMMPSMSRSQIRIAQFIIENPSKVLNMNILELARSCESSPSTVVEFSKKLGFS 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + ++AL++ + D LR + + + + ++ + S+E Sbjct: 64 GYKSFQIALAQEI--------ALFETLKPDSDRLRRICRDFLGFVFSELKQSVELISDEV 115 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L ++ + + + G + ++ KL + GF + + Sbjct: 116 LTRASDIILKSNVVEIFAYGFDSIAGKDLFLKLKEFGFQVNFFSNPFLQSISASHLGNRG 175 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +AIS + +L A + G V+AI + + + L + + Sbjct: 176 CAVAISSSHSSTDLLDAISFSKKSGASVIAI-ASPSSKIAEVCDILLPAYVRTEILSEGG 234 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + Q ++ DLL + + + D + E+ +H E ++ + Sbjct: 235 FLTKYLQIVIVDLLILKMFEIDKDRLYEKYKHFETILSQ 273 >UniRef50_C0DAS9 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DAS9_9CLOT Length = 290 Score = 157 bits (396), Expect = 5e-37, Method: Composition-based stats. Identities = 56/259 (21%), Positives = 108/259 (41%), Gaps = 5/259 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 + RI+ +Y L++S K++A+Y+L + H S +A + G S+V +F Q L YKGF Sbjct: 17 IGRIKMQYASLSKSQKRIANYILNHREAVIHHSITTMAQKTGTVPSTVTRFCQALSYKGF 76 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 +K+ + + + + I+ D L++V +KL+ + A+ T+ L Sbjct: 77 SEMKV-----YMEKNLASPLTMDALIQKTDTLQVVLQKLMNSSQNAIQDTMRTLDARSLT 131 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 E V + +A I+L G + A L++I + AV D D+ Sbjct: 132 EAVDAILAAGNILLFGQSGGYISATYARQLLLRINVLSQAVNDRVDANLAASTLKKGDVA 191 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + +Y+G R + A + IT T + + + A L+ Sbjct: 192 IGFAYSGEARSVIEALTTAKHNKATTIVITANTNSTMAKLADLKLFYSYNIPDDLQYLHL 251 Query: 244 ACHAQGMLTDLLFIALIQQ 262 A + M+ + ++++ Sbjct: 252 ASMCEIMIIGAIQAEILRR 270 >UniRef50_A3IB77 Transcriptional regulator n=1 Tax=Bacillus sp. B14905 RepID=A3IB77_9BACI Length = 287 Score = 157 bits (396), Expect = 6e-37, Method: Composition-based stats. Identities = 57/283 (20%), Positives = 112/283 (39%), Gaps = 7/283 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N RIR+++ L + K +A Y++ P +S+QL + S ++V++ + LGY Sbjct: 3 NYNERIRKQFNELTKRQKLVAKYIVDFPKEVAFQTSKQLGIASETSDTTVIRLSYALGYS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRL--VGEKLIKENTAAMYATLNVNSE 119 GF L+ + L S PI L+ + + +I+++T+ + ATL Sbjct: 63 GFSELQKEIQATLLEDSSPISDPIEGLRSTSKSLKDTNLIQHVIEKDTSYIRATLEQIDY 122 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASS 178 + + + +L S+ + I+ G +S A ++ L + N ++ + Sbjct: 123 TQYKKAIDLLISSEKRIVIGFRSSYGPANWLSFSLNVVVGNTFLYRGEIEDSNYLLSLID 182 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 LL+AIS+ +E N + G +V+ IT + L + +A Sbjct: 183 EKTLLVAISFPRYSKETNAFVKAAKKKGAQVIGITDDELSPLGLLSDILFKVVAPSPI-- 240 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+ L +LL + D +R+ + Sbjct: 241 --SLKGATPTFALLNLLITGIAASDEIKVQKRMEDYDQTSDDF 281 >UniRef50_C9M9W1 Transcriptional regulator, RpiR family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M9W1_9BACT Length = 313 Score = 157 bits (396), Expect = 6e-37, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 115/279 (41%), Gaps = 7/279 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L +R+ + L++S KK+A Y+L P T +++QQLA ++G S+++VV+FA+ +G + Sbjct: 37 KILEELRRSFSTLSRSQKKIATYILENPTTVAFMTAQQLAEQSGTSEATVVRFARAVGLE 96 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GFP LK L + + + R + + +I ++ + Sbjct: 97 GFPNLKSKLQSCVEDRLTAAERLESY--RTIGKKANLVQNVISQDLDKETLPYINIEDSS 154 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + ++ SA ++ L G+ ++ + + L N + ++ + Sbjct: 155 IVALSKVICSAPQVYLIGLRSARALIEYLVAYLSWFLPNIVPLAGDSF-TESLGLADKSS 213 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L+L IS+ + G +IT + L + + + L+ A Sbjct: 214 LVLGISFPRYTQLTIDCLSFAHDQGFLTASITDSEKSPLAKVSDYHLFVPCSH----LAF 269 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 I + + L + +++ A ER+ H EAL K+ Sbjct: 270 IDSLVLPMCAINALLLQIVECLGGEAQERLLHLEALWKR 308 >UniRef50_A0YBK7 Transcriptional regulator n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YBK7_9GAMM Length = 271 Score = 157 bits (396), Expect = 6e-37, Method: Composition-based stats. Identities = 61/272 (22%), Positives = 113/272 (41%), Gaps = 6/272 (2%) Query: 10 RYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLA 69 L++++ +A +L PD A + ++ LA A VS + +F + LG FP K+ Sbjct: 1 MLPSLSKAESSIARAILADPDAAVNSTTADLARIAAVSDPMISRFCRTLGCSSFPDFKVR 60 Query: 70 LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTML 129 L++ S + I + D L EK I N AA+ + + + V L Sbjct: 61 LAK----SLVSKASFISEAVSKGDDAALYIEKRINANQAALEYIRSKLKPAIIEQTVAAL 116 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYT 189 ++RI + G+G + +A++ KL ++G A D A+ + ++L IS+T Sbjct: 117 GRSKRIEIFGMGGAAAIAKDAQHKLFRLGIPTVAYEDHLMQRMAAAAADENTVVLVISFT 176 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE-EQATNSASISACHAQ 248 G R + AD ++AIT + L + A + + E E T ++ Sbjct: 177 GRTRAMIEIADIAKNSQATLIAIT-NPKSPLAKLADITITSGDEIEDTTIYVPMTTRIII 235 Query: 249 GMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + D+L L E+++ + + Sbjct: 236 LTIIDILATGLALTQGPAIDEKLKTIKHSLDN 267 >UniRef50_B1M7S3 Transcriptional regulator, RpiR family n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M7S3_METRJ Length = 312 Score = 156 bits (395), Expect = 6e-37, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 114/283 (40%), Gaps = 8/283 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + RI Q Y L+ + +++A ++L P A L +LA+ GVS ++ +FA+ +GY Sbjct: 9 SVAQRIAQAYPSLSAAHRQVARFVLDHPLRAATLPVNELADLVGVSVATANRFARAVGYA 68 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + AL + + + + + + + AT E Sbjct: 69 GYAKFRAALVLGYEKALAPVEK-LRGGREQPTTVSGILDGALADIVRNIEATRRGLDGET 127 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAA---VRDMHALLATVQASS 178 V +R ARR+ + G+G+S A A L + + T++ + Sbjct: 128 CGRAVEAIRQARRVYVVGLGSSSWPAGILARNLDVNREDVHLLATLEGPGFAARTLRRLT 187 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 DDL++A++ + A+ + G VLA+T + L A+ LY + Sbjct: 188 ADDLVIALATPRYFADTVRLAEIARKHGAAVLALTDGPHSPLVATATLALYAQTDCHYFA 247 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++ + L + L A ++L P R +EA++ L Sbjct: 248 ----ASDASLTALVEALASAFAHATVDLVPAATRVTEAVLPWL 286 >UniRef50_B7GSI0 Transcriptional regulator, RpiR family n=1 Tax=Bifidobacterium longum subsp. infantis ATCC 15697 RepID=B7GSI0_BIFLI Length = 289 Score = 156 bits (395), Expect = 6e-37, Method: Composition-based stats. Identities = 62/280 (22%), Positives = 104/280 (37%), Gaps = 3/280 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L RIR L + +K+A + L D L +A E GVS +VV+ LG Sbjct: 12 SILARIRLALDALDPAQRKVARFFLENSDVIGDLPIATVARETGVSAGTVVRTCADLGCH 71 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ +++ ++ A + I+ + + Sbjct: 72 GYREMRILIARDNAIRSLLEQRGHARADGEAGSEGERIIARIRGMLDMLRELPDCLDAGA 131 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + M+R AR I++ G S VA N +L++ G VRD + P D Sbjct: 132 FNRALEMIRDARGIVIVASGLSSGVAANLESRLLRYGRLVTFVRDPLGQDISASLLKPGD 191 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++AIS +G R A + G LA+T F ++L RA+ L N Sbjct: 192 LIIAISGSGENRHTVHAVEVATANGADALAVTSFANSSLATRATTTLVASTPATTFNDEL 251 Query: 242 I-SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 I ++ ++ + L L E P I + + Sbjct: 252 IDTSRLPLDIVIESLTGQLG--RGEEDPGVISQISEHLDR 289 >UniRef50_C2APV8 Transcriptional regulator n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2APV8_TSUPA Length = 303 Score = 156 bits (395), Expect = 6e-37, Method: Composition-based stats. Identities = 58/282 (20%), Positives = 97/282 (34%), Gaps = 7/282 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M ++ + A +++A +L P+ + + A A V QSS+V+FA LG Sbjct: 23 MELRTVLQAQMDRFAPGQQRIATVILTDPEGTALRTIAETARIAEVHQSSLVRFATGLGL 82 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+PAL E LA Q S +D + + + + T Sbjct: 83 SGYPALVKLCREHLAEQAHLVSRFDRAAAEHEDSELFLAA--VDNDQQNLSRTYARIDSH 140 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASSP 179 + VT L A + + G+ VAQ FA+ L + + M L+ ++ Sbjct: 141 QWSRTVTALAEAPNVHVMGLRKCLGVAQMFAYLLHMVRPGVHQIAPPMGGLVDQLRDLHT 200 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD+ + IS + A R G +A+T + L A Sbjct: 201 DDVFVGISIRRYTADTVNAMRYARRTGLHTIALTDDAASPLAAVADTTFLIDTHGVTI-- 258 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + A L L A+ + EAL+ + Sbjct: 259 --FRSMSAFTSLIQSLSTAVALARGARTRNELAQDEALLDEF 298 >UniRef50_B2TKZ2 RpiR-family transcriptional regulator n=49 Tax=Bacteria RepID=B2TKZ2_CLOBB Length = 301 Score = 156 bits (395), Expect = 7e-37, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 120/279 (43%), Gaps = 7/279 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I+ ++ L++ K +A+Y+L D A +++ +L GVS+S+VV+FA +LG+ Sbjct: 14 DLMRLIQIKFSRLSKGQKLIAEYILKNYDKAAFMTAARLGTSVGVSESTVVRFANELGFS 73 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P L+ AL E + ++ + D + ++K + + ATL ++ Sbjct: 74 GYPKLQKALQELIKNKLTTVQRIELQNDYYSDG--DALKGVLKADMENIRATLEKINQNV 131 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNA-AAVRDMHALLATVQASSPD 180 V + A+RI + G+ +S +A+ + L I N + + + D Sbjct: 132 FENVVQSIFEAKRIYIIGLRSSTALAEFLGFYLNVILQNVRIVSYGISDIFEQMINIGED 191 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++ I + + KV+AIT + L +A + L + + Sbjct: 192 DLVIGIGFPRYAAKTIDVLAFAQDRSAKVVAITDSLLSPLASKADYALIAQSNMASF--- 248 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + + A + + L IA+ ++ + E + K Sbjct: 249 -VDSLVAPLSVINALVIAVGMREKDRISTTFGSLEQIWK 286 >UniRef50_UPI0001B56E76 RpiR family transcriptional regulator n=1 Tax=Streptomyces sp. SPB78 RepID=UPI0001B56E76 Length = 294 Score = 156 bits (395), Expect = 7e-37, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 111/278 (39%), Gaps = 2/278 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + IR GL+ ++ ++A +L + LS ++A A + SSVV+ Q+L ++ Sbjct: 11 DLAAHIRSHLSGLSGAEARVARTVLDLGERLVGLSVSEVAALAETAPSSVVRTCQRLEFR 70 Query: 62 GFPALKLALSEALASQ--PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 GF LK+A + + + DP + + A+ Sbjct: 71 GFQELKIAAARQAPRPAREPGAAGGPADSGDAADPAARALAATLAASREALDGLRTTLPP 130 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 +L E +L A R+++ G G S V + A++L +G A D + + Sbjct: 131 ARLGEAARLLHGASRVLVVGAGLSQPVVADAAYRLRAVGRAVDAPTDPLTAQLSAGLLTD 190 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 + LA+S+TG R AA G VLA+T + + L + + L ++ Sbjct: 191 SSVCLAVSHTGATRSTVDAARRARLQGAAVLALTSYVRSPLTETSDCVLVAGGQDLVLGL 250 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 ++++ A + D L L+ + A + S + Sbjct: 251 EAVASRLAHLAVIDALVQTLLDLGGDEARRALDVSAEV 288 >UniRef50_B1KTP2 Transcriptional regulator, RpiR family n=10 Tax=Clostridium RepID=B1KTP2_CLOBM Length = 255 Score = 156 bits (394), Expect = 8e-37, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 99/256 (38%), Gaps = 12/256 (4%) Query: 8 RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALK 67 + + L +++K L +Y+ +S + A VS ++V++ +KLG+ GF LK Sbjct: 7 EKILKELTKNEKDLLNYINSNNSKIYKMSINEFAQSTYVSTATVLRLCKKLGFNGFNELK 66 Query: 68 LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 L ++L + + I L+ + T+ + E+L V Sbjct: 67 FNLKKSLTLKNKGYDSSIG------------LNGLLSRRLLELKETMISLNLEQLDSIVD 114 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAIS 187 L S + I + G G + + + L+ + D + T +D+ + S Sbjct: 115 YLCSDKNIHIFGRGLTQMSLEYLYNILISLNRQCMFYLDPPLVYQTASQMDENDVFIIGS 174 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHA 247 + G + A + G V+AIT + L ++A L + + + I++ + Sbjct: 175 FGGSTDPIVKAVEISKENPGTVIAITSNPNSELAKKADIVLIGETQNRFFSGIDINSRLS 234 Query: 248 QGMLTDLLFIALIQQD 263 + +++ + + Sbjct: 235 IQFIVEIIVELYMSRM 250 >UniRef50_Q88UA4 Transcription regulator n=1 Tax=Lactobacillus plantarum RepID=Q88UA4_LACPL Length = 287 Score = 156 bits (394), Expect = 8e-37, Method: Composition-based stats. Identities = 60/281 (21%), Positives = 120/281 (42%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + ++ ++ ++A Y+L D ++ ++LA + S S++++ AQKLG+ Sbjct: 1 MQLIEQL-SHRSDFTTTETRIATYILSHQDAMPNILIKELAAKTYTSHSAIIRLAQKLGF 59 Query: 61 KGFPALKLALSEALASQPE-SPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 GF + AL+ + + + +V + D + + +K+ T A+ + Sbjct: 60 HGFRDFQRALTTEIVINTQATTNVDANFPFTDKDAVTEIIKKMADLKTNAIANAQHQLRP 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E L + +L AR I+L G S L A++F KL+KI A + + +P Sbjct: 120 EVLTKSAYLLNKARHIMLFSQGDSQLRARSFQNKLVKINRFAQIAEMYADEAWNIASLTP 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE-QATN 238 D + ISY G A V+ +TG + LQQ A++ L E Sbjct: 180 QDCAMFISYAGNTDVHQRFAKYCQAHHIPVIVLTGNVDSPLQQFATYQLVITQNERNNAK 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + ++ + + D LF + + + ++ ++ L++ Sbjct: 240 LGTFASQVSFDYVLDTLFAIMYANNFQTNLAHLKTTQLLIQ 280 >UniRef50_C9KLC1 Transcriptional regulator, RpiR family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KLC1_9FIRM Length = 279 Score = 156 bits (394), Expect = 9e-37, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 99/262 (37%), Gaps = 2/262 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + ++++ + S++ +A YLL ++++QLA E S +++V+F QKLG+ Sbjct: 1 MNLIKELQEQQD-FSDSERTIATYLLQHSRLLPSMTTRQLARETYTSSAAIVRFCQKLGF 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ ++ + + + + D + + +K+ + A+ T + + Sbjct: 60 GGYTEFRVEFLAQM-MKYLEQPYGVELSVTNQDSVHSILDKVTRLEIDALQETYQMLDAK 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + +L+ + I + + +A A + + M + + Sbjct: 119 EFVRAFAILQKTQHIDFYAMDNNLDIANMAASSFIMANKCSTVHTAMTMQYLQATGAPKE 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 + IS TG R L A + G L IT + L A + + Sbjct: 179 HVGFFISRTGENRMLIDIAHLLKLRGNPFLLITANQESTLASLADVVFPVASVKSMEELG 238 Query: 241 SISACHAQGMLTDLLFIALIQQ 262 +TD+LF L+ + Sbjct: 239 PRVFLMGAKYVTDVLFAVLMTR 260 >UniRef50_A5KIQ4 Putative uncharacterized protein n=2 Tax=Ruminococcus RepID=A5KIQ4_9FIRM Length = 288 Score = 156 bits (394), Expect = 9e-37, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 109/282 (38%), Gaps = 3/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + I+++ + + ++ + Y+L P+ +SS++L + S +SV +F QK+G Sbjct: 1 MSIIQIIKEQM-NMTERERDICRYILENPEKIEEMSSRELGHATFTSAASVTRFCQKIGV 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGFP K+ L + + + + + K K A+ T S Sbjct: 60 KGFPEFKMQFVRELRTG--GMEDVSAVTMSERENVVTMVRKAEKIQRQAVEETNKELSYT 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L ++ A + + +A+ G ++ +++ + Sbjct: 118 QLVRIGKLIADASCVDFYVYDMNIYLAKYGCALFFHAGKLSSVHSEINIQGLHAAMPADG 177 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 + + IS+TG +L + R G K++ I+G + Q A+ LY E+ Sbjct: 178 HVAIIISHTGKNEQLAEIEKMLHRGGTKIIVISGNRKGVVGQYATEFLYAAGSEKVEEFW 237 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 S + + L D+L+ + E E K L+ Sbjct: 238 SSTFFASGKYLLDILYGMEFSRRYEENIALNSRYEKSGKNLL 279 >UniRef50_UPI0001C42AD8 transcriptional regulator n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42AD8 Length = 281 Score = 156 bits (394), Expect = 9e-37, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 107/281 (38%), Gaps = 7/281 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L I++ L + + +ADY+L L+ LA S +++++ LGY Sbjct: 3 NPLTVIKEHLSKLTNAQRIIADYILKNSSEVAFLTIHDLAQRVNTSSTTIMRLMSNLGYS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + L + + Q + N + + I + + + + + Sbjct: 63 GYSEFQKGLQKLIRDQTAPQTRLEINLENVNKD--DLWGNTINHHLYQIQKVMEQMPKSQ 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAA-AVRDMHALLATVQASSPD 180 L E V + S+R++I T + + + Q L + N + D + + + Sbjct: 121 LDEVVKKITSSRQVICTSVRSGLPIGQYLTHGLNRTLGNCRLVIADTSDWVDEIITMKSE 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++A S+ + + G +++AIT + + + A L ++ A +++ Sbjct: 181 DLIIATSFPRYAKRIIDFVKAAKCHGVQIVAITDSYSSPIVEYADIVLPCDSDSLAFHNS 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++ D L A E +R+ ++K + Sbjct: 241 P----IVAMIVADYLINATAIGQSEETRKRLDKINEMLKDM 277 >UniRef50_A6LTU2 Transcriptional regulator, RpiR family n=3 Tax=Clostridium RepID=A6LTU2_CLOB8 Length = 281 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 120/282 (42%), Gaps = 6/282 (2%) Query: 1 MN-GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M+ ++ ++ ++++ +K+A Y+L P++ L+ ++LA +GVS ++V +F LG Sbjct: 1 MSEVYQKMAEKIPNMSKAQEKIAKYILAHPNSTPFLTVEKLAKLSGVSIATVTRFVIFLG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 YKG+P ++ Q S + I D + +++ + T+ + Sbjct: 61 YKGYPEFLRD-TQESMQQQVSKAKRIRIDSDSSDSEERDIYNIFEDDVNNIKLTMEDLNI 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 +L + V +L +A+RI + +S ++ + L + N + + + + + Sbjct: 120 YELRKSVNLLLNAKRIYIVARRSSAVLGMFLKYYLDLMFNNVNLIEHIEQIPKQISGVNN 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +D+++ I++ R + R G ++IT + L + L I++ Sbjct: 180 EDVIIGITFEKYARSTVEIFTHLKRKGATTISITDSMLSPLVPYSDITLTAISKGTRF-- 237 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 I + A L + L ++ ++ + + E +K Sbjct: 238 --IESFAAPLSLINALIASIEKEKKDFFNSNVELLEEACRKF 277 >UniRef50_A8F3C1 Transcriptional regulator, RpiR family n=7 Tax=Thermotogaceae RepID=A8F3C1_THELT Length = 275 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 49/277 (17%), Positives = 114/277 (41%), Gaps = 12/277 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + + L+ S+KK+A Y+L +PD H S + A VS++++ + +K+ +KG Sbjct: 2 IFDYLLGIFDRLSDSEKKVAMYILERPDDVIHYSITEFARVVDVSETTIYRVIKKMKFKG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + A K+ L + P + ++ ++E + ++ L Sbjct: 62 YQAFKIELIRQTSGVKSVPLTNMET-----------LDEYVEEIKSLAERMKTTLKKDDL 110 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + +++ I G+G S +VA+ + L +GF++ D H + DL Sbjct: 111 QKAADWIVQSQKTIFFGVGLSSVVAEYGSLLLSLLGFSSFCYNDPHVQVIVATGLCKKDL 170 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++++S++G R+ + VG + +A+T + L LY+ + Sbjct: 171 VISVSHSGNIRDTVKSTQVARDVGARTVAVTAGINSPLSSVVDIALYSPVARFE-KYEFL 229 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + + ++LF ++++ + ++K Sbjct: 230 RGNLGEMAVLEILFKMVLKKIYGEKESHLNDLSEVLK 266 >UniRef50_C2HCM3 RpiR family transcriptional regulator n=12 Tax=Enterococcus faecium RepID=C2HCM3_ENTFC Length = 300 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 47/282 (16%), Positives = 118/282 (41%), Gaps = 4/282 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M +I++ + S+ ++ +LL ++ Q++A V S++++ A+K+G+ Sbjct: 1 MLLREKIKEI--SFSPSENEVIQFLLSDSPALGEMTIQEIAERCYVHPSTLIRVAKKMGF 58 Query: 61 KGFPALKLA-LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ + + A L+E + V + D + + K+ + TL++ Sbjct: 59 DGWVSFRNAFLAETAYLEGNFQDVDANLPFSTTDGIMTIANKMASLEQMTIQDTLSLIHH 118 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++L + ++ A++I++ ++ L++Q+F K+ +I + V + Sbjct: 119 DQLQKAKQLMLQAKKIVIFASNSNTLISQDFMLKMKRIKMDVTIVTTFGESFYEAYNCTS 178 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN- 238 D + ISYTG + A+ + + +LA+T + L ++ L E+ + Sbjct: 179 DMCGILISYTGENNVILRTAEILKQNHVPILALTSIGDSTLSSMSTAALRLTTRERLYSK 238 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + + L D+L+ + ++ + + K Sbjct: 239 IGNFTINTSICYLLDVLYSCVFAENYQQNLVHLISVGQKFDK 280 >UniRef50_A4IT25 Transcriptional regulator n=5 Tax=Bacillaceae RepID=A4IT25_GEOTN Length = 262 Score = 155 bits (392), Expect = 1e-36, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 95/259 (36%), Gaps = 19/259 (7%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 ++ ++ D + DY++ P ++ ++LA VS +V++F +K+G GF K Sbjct: 5 EQIAQFSELDYAIYDYVVKHPHEVAYMRIRELAEAVHVSPPTVLRFCKKVGCDGFSEFKT 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L + + + + + TL + E + + T+ Sbjct: 65 KWKLHLRENERTSII----------SSQEALREFFE-------RTLTADYERTILDAATV 107 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + A +I G G+SG++A+ + + ++D + + +++A+S Sbjct: 108 IARADHVIFVGSGSSGILAEYGSRYFSAFQKFSVYIKDPFFPIY--GHYFTNCVVIALSV 165 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 +G + GG +++IT +L + + L A + ++ Sbjct: 166 SGETQHTLAQVHRFKEKGGTIISITNRKHCSLANISDYNLTYYATAERMGQTDVTTQLPV 225 Query: 249 GMLTDLLFIALIQQDLELA 267 L + L + + Sbjct: 226 VYLLERLAKEMYRLLPTQT 244 >UniRef50_C5BXN6 Transcriptional regulator, RpiR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5BXN6_BEUC1 Length = 293 Score = 155 bits (392), Expect = 1e-36, Method: Composition-based stats. Identities = 66/279 (23%), Positives = 122/279 (43%), Gaps = 6/279 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L RIR L ++++A +L +P+ S+Q +A+ AGVS+++VV+ AQ+LG+ G Sbjct: 13 VLARIRAHTGELHPGEQRVAHVVLDRPEWTIEASAQDVADAAGVSRATVVRTAQRLGFAG 72 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 +P L++ L+ + + + + A+ L + + + + Sbjct: 73 YPQLRVLLARDVGLSGAWTRTSGEP-----EEPIEIVRAYFHDVARAVDGMLALLAADDV 127 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V +L A ++ G G S +A A +L IG +A A D + + P D+ Sbjct: 128 RRAVDLLAGAATTLVIGNGLSSTLAAEAAMRLNAIGRSAEAPADYVSQSVKARLLRPQDV 187 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA-S 241 L +S TG AA G +++A+T FT + L + AS L + + Sbjct: 188 CLVVSGTGSTTPTLQAARAARSAGAEIVALTAFTGSPLGELASVTLVAGMGATSFRDEIT 247 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + QGML + L A+ ++D A + ++ + Sbjct: 248 TTTRIPQGMLLNALVGAVRRRDPAGAQDAQARLLEVIGE 286 >UniRef50_C3FD32 Phosphosugar-binding transcriptional regulator n=1 Tax=Bacillus thuringiensis serovar monterrey BGSC 4AJ1 RepID=C3FD32_BACTU Length = 294 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 57/282 (20%), Positives = 115/282 (40%), Gaps = 6/282 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + ++++ + S+ ++ YL Q + + +++Q++ E S++++ A+KLGY Sbjct: 1 MLLIEKMKEDI--FSPSESEIIVYLFKQRENIKDKTTKQISKETYTHPSTLIRIAKKLGY 58 Query: 61 KGFPALKL-ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ LK L E S+ + D + V K+ N + TL++ + Sbjct: 59 SGWVELKNSFLGEIEYLNSHFSSIDANYPFDDRDSIMTVANKMALLNQTTISDTLSLLNH 118 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L ML A I + + + L+ +F K+ +IG + + S+ Sbjct: 119 DDLQRATNMLDEAAHIKVFSMYHNLLICHDFKSKMNRIGKHVSLCT--VDPHFEAVNSNT 176 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN- 238 + + ISY+G ++ + R V+A+T N L + A L E+ + Sbjct: 177 ETCAIVISYSGESEDIVGRLPFLKRKKVPVIALTSIGENTLTKYADCILRITTREKLYSK 236 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 S S+ + L DLL+ + +D + E Sbjct: 237 IGSFSSNESICFLLDLLYACVFSEDYKNNLEYKIRISKYFDH 278 >UniRef50_C4Z9F6 N-acetylmannosamine kinase n=4 Tax=Clostridiales RepID=C4Z9F6_EUBR3 Length = 310 Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 56/281 (19%), Positives = 117/281 (41%), Gaps = 8/281 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L RI +Y +++ K LA Y+ D A L++ ++ G+S+S+VV+FA LGYK Sbjct: 7 DLLNRINAKYSTMSKGHKLLATYITDNYDKAVFLTAAKMGETVGISESTVVRFATSLGYK 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P + AL E + ++ S R + E +++ + + TL + Sbjct: 67 GYPDFQKALEELVRNKLNSVQRMEVTYGRI--SQSQILETVLQSDRDKIKTTLEKIDADA 124 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM--HALLATVQASSP 179 V + +R+I + GI + +A A+ + + + + L + Sbjct: 125 FDLAVDTILQSRKIYIVGIRSCAPLASFLAFYMNLMFEDVCLLTTNSSSELFEQMVRIGK 184 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD+++ IS+ A + KV+ IT + + +S L ++ + Sbjct: 185 DDVIIGISFPRYSMRTLKALEFANNRSAKVITITDSIHSPMNLYSSCNLIADSDMASI-- 242 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + A + + L +AL + + + + E + + Sbjct: 243 --VDSLVAPLSVINALIVALCMKKQNIVAKTLTELEDIWNE 281 >UniRef50_C8P486 Transcription regulator n=1 Tax=Lactobacillus antri DSM 16041 RepID=C8P486_9LACO Length = 277 Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 61/287 (21%), Positives = 131/287 (45%), Gaps = 19/287 (6%) Query: 1 MN--GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 M+ L I+ L + +KK+ +L +P+ + ++ +LA +A V +++ +FA+ + Sbjct: 1 MSEEFLKSIKLISADLTRQEKKIVRVVLNEPEAVQAMTILELAKKARVGTATISRFAKHV 60 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 G F K L+ + Q + + +++I ++ T ++ S Sbjct: 61 GCVDFADFKSYLTTSNLIQAKRL------------SESSILDEVISYYKQSLAETKSLIS 108 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 +L + ++R A ++ + G+G+ G AQ +LM++G N+ A+ D + S Sbjct: 109 LNQLKKITRLIRKANKVYILGVGSFGYNAQELNQRLMRMGINSCAICDSSMMSIIDTIIS 168 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P D +LA S +G E+ A + G + +IT F+ + L +R+++ L E++ N Sbjct: 169 PKDTILAFSVSGNTIEVCDAVQKCREKGVVITSITAFSNSVLAKRSNNILLIKNTEKSPN 228 Query: 239 SASISACHAQGMLTDLLFIALIQ-----QDLELAPERIRHSEALVKK 280 +++ + DLL L++ +++ E + + KK Sbjct: 229 YNFMNSQFTINYVIDLLTEILLEHPTYLKNMNKTIEEVLRIKEANKK 275 >UniRef50_A3X377 SIS domain protein n=5 Tax=Rhodobacteraceae RepID=A3X377_9RHOB Length = 298 Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 47/282 (16%), Positives = 106/282 (37%), Gaps = 7/282 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L R+ + ++ L +K A Y+L P+ + +++A A V ++ V+ A+++G++G Sbjct: 13 VLDRLTEEWEALTPEAQKAARYVLENPNDVGVSTVREIAEAASVKPNTFVRMARQVGFEG 72 Query: 63 FPALKLALSEALASQPESPSVPIH--NQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + + +A+ S IR L + + + + T + E Sbjct: 73 YDDFRAPFRDAIRQGTASFPDRARWLQDIRKSGDLGGLYADMAEAAIRNLEDTFSGIDAE 132 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSP 179 + + +R++ G+G + A+NF + A+ + + + Sbjct: 133 AMKLAAEAIWGSRQVFTLGVGVNNANARNFTYLASTGMTQFHAIPRPGSTAVDDLAWADN 192 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+L+A+S R E+ A + G ++ ++ + + + A H + Sbjct: 193 RDVLIAMSMRPYRSEVIAALEVAREQGMTIIGLSDSPASPIIRAADHGFVVAVDTPQF-- 250 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + L + L +I E ER+ KL Sbjct: 251 --FPSSVSAIALLETLLSFVIAVASEEIVERVEKFHQRRHKL 290 >UniRef50_A6LS27 Transcriptional regulator, RpiR family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LS27_CLOB8 Length = 288 Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 55/274 (20%), Positives = 113/274 (41%), Gaps = 5/274 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + L +++K LA+Y+L + +S +LA + S S++ + +K+G Sbjct: 1 MTIYNLLL-YANNLTETEKLLANYILENQEQVAGMSLDELAKVSFSSISTIHRLCKKIGL 59 Query: 61 KGFPALKLALSEALASQPESPSV-PIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 GF K+ E L S+ P I+ + DD + + + + T + + Sbjct: 60 TGFKEFKIKFVEELYSKMNKPENIDINFPFKKDDTQFQIASNIKQLYIDTLTNTFSFFNS 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF--NAAAVRDMHALLATVQAS 177 E+L + V ++ +A + + + + A NF K+ IG N + + A + Sbjct: 120 EQLEDAVDLIYNAEIVDVYAVTNNIQTALNFQDKMQSIGRYVNVSLIPMNQVYRAAASNN 179 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA- 236 + + +SY+G E+ A + R + L I N L + + ++ ++E Sbjct: 180 KNKQVAIILSYSGKTPEIKEIALVLKRKEIETLVICSAQENYLTKLFKYHIFVSSKENLK 239 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPER 270 + S+ A + D++F + +D E E Sbjct: 240 KKISHYSSHIATQYVLDVIFSCIFNKDYEKNMEY 273 >UniRef50_C8Q2X6 Transcriptional regulator, RpiR family n=1 Tax=Pantoea sp. At-9b RepID=C8Q2X6_9ENTR Length = 283 Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 58/277 (20%), Positives = 124/277 (44%), Gaps = 7/277 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +I+ L+ +++K+A +L A S QQLA AGVS SVV+FA+++G+ G Sbjct: 2 LAQQIKDNMAELSPAERKIARAMLADYPGAGLGSVQQLAERAGVSLPSVVRFARRMGFGG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F + AL + ++ Q + P + + + + E IK +T A+ +L +E ++ Sbjct: 62 FVDFQQALRDEISEQAKGPLQRLETWVT-TESASALMEAAIKSSTLAIQCSLRDIAEYEI 120 Query: 123 HECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASSPD 180 E ++ + ++ G G S +A F L ++ + + H + + + + Sbjct: 121 AEATRLIGAKEHHVILGGGRISQSLAMYFGRNLQQVRRGVDVLAENHHDRIQQIIDVNKN 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ + + ++++ A E++ G ++A+T + + A L E Sbjct: 181 DVFVLFDFRRYQQDMYELAQEIVARGATLIAVTDTQLSPIASLAKVVLAIHVETPWL--- 237 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 A +L D + ++++ + +R++ EAL Sbjct: 238 -FDGYAAGIVLIDAIIASIMESQGDKTVQRLQQWEAL 273 >UniRef50_C5EP47 Transcriptional regulator n=2 Tax=Clostridiales RepID=C5EP47_9FIRM Length = 294 Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 56/283 (19%), Positives = 118/283 (41%), Gaps = 7/283 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +++++ + +K +A Y+L + +S+ LA+ + S+++VV+ +QKLG G Sbjct: 2 LLEQLKEQL-NFTKHEKDVALYILEHREQIPGMSAGDLASASLTSKATVVRLSQKLGLAG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + LKL L + + ++ I + L A+ T + Sbjct: 61 YQELKLRLVAEINQDNRISQMLANDPITDKSSYADIVSTLPVLYDKAVTRTRLSLDTNSM 120 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + +L+ A I + G G S ++AQ +K +G ++A +++ S + Sbjct: 121 NRINNVLQKAECIDIYGTGISYILAQAATFKFATLGVESSAYESINS-HYLAARSHKKTV 179 Query: 183 LLAISYTGVRRELNLAADEMLRV-GGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 IS+TG R +N A + V+ I G + ++Q + + + Sbjct: 180 SFLISFTGANRTVNSMARYLREATNNHVVGIMGPHSSDIRQWCHEIVEISNRDSLLSLDV 239 Query: 242 ISACHAQGMLTDLLFIALIQQDLEL----APERIRHSEALVKK 280 IS+ A + D+ F L+ + + + E ++H L+ + Sbjct: 240 ISSFTAANYVLDIFFALLLSRRYKEHAKSSIEMLKHMPLLLNQ 282 >UniRef50_C1B8E5 Putative RpiR family transcriptional regulator n=1 Tax=Rhodococcus opacus B4 RepID=C1B8E5_RHOOB Length = 289 Score = 154 bits (389), Expect = 3e-36, Method: Composition-based stats. Identities = 61/275 (22%), Positives = 107/275 (38%), Gaps = 4/275 (1%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L IR LA S++++AD + +P S+ +A AG S ++V++ Q LG+KGF Sbjct: 14 LSAIRAVAPKLAPSERRVADVCVERPQDVAWWSAADVAEHAGTSTATVIRACQNLGFKGF 73 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 +++ L L + P + D + + + L E+ Sbjct: 74 QHVRMLLLRDLGAADTEPVGTPPAE----DKGAALVRAVFSGLATDLAGALAPLDEDAFE 129 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 VT L A R+++ G G SG A A + + G +A A D T + D+ Sbjct: 130 RAVTALAEAERVLVVGNGGSGPSAATLAVRFILNGRHAEAPTDAVIQQLTAGRLTSRDVC 189 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 LA+S +G+ + G V+ +T + + L +++ L S Sbjct: 190 LAVSDSGLNSVTLRPVEAARAAGATVIGVTSYARSTLVEKSDIGLVIGGGTGPWGGLGAS 249 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 A Q L IA+ + + A + +V Sbjct: 250 ATVVQIAFLISLQIAVSRARGDAAEAAAETFKQIV 284 >UniRef50_A4WSY4 Transcriptional regulator, RpiR family n=19 Tax=Alphaproteobacteria RepID=A4WSY4_RHOS5 Length = 299 Score = 153 bits (388), Expect = 4e-36, Method: Composition-based stats. Identities = 57/280 (20%), Positives = 101/280 (36%), Gaps = 7/280 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +R L +++++LA ++L Q A S LA A VS +VV+ QKLG+KG Sbjct: 17 IEELMRSALPDLTRAERQLATHILRQYPVAALGSITALAKAADVSTPTVVRLVQKLGFKG 76 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 +P + L + + SP G + + A + ATL + Sbjct: 77 YPDFQAGLRGEVEAMLMSPLAKHERWAGGVPDTH-ILNRFADAVVANLEATLGQIDHAEF 135 Query: 123 HECVTMLRS-ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASSPD 180 +L RR+ + G + +A F + + DM + Sbjct: 136 DAAARLLADPGRRVFVLGGRITHALADYFVTMMKVTRPEVMLMSDMSSTWPPALLDMGKG 195 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+LL + A+ + G +V+ +T + A H E + Sbjct: 196 DILLLFDIRRYENTVLQVAEMAVEQGVEVVLMTDRWISPAAVHARHTFSCQIEVPS---- 251 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + A +L + L A+ E ER++ E L + Sbjct: 252 AWDSTVAMLVLLETLISAVQSLTWEQTEERMKRLEELYAR 291 >UniRef50_A5KNM9 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KNM9_9FIRM Length = 291 Score = 153 bits (388), Expect = 4e-36, Method: Composition-based stats. Identities = 54/283 (19%), Positives = 116/283 (40%), Gaps = 7/283 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L ++++ +K +A+Y+L D LS+ +LA + S+++VV+ +QKLG G Sbjct: 2 LLEKLQEHK-NFTAHEKDVAEYILSHLDQISELSAGELAKASYTSKATVVRLSQKLGLNG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK+ L+ + + + + + + + + L A+ T + + Sbjct: 61 FQDLKITLTAEINQKKRIDQLLANEPVTAESTYDDIVKTLPALYDKAVTNTRLSLDKNSM 120 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 +L+ A I + G G S ++AQ+ A+K+ +G +A +++ + + + Sbjct: 121 KRISQVLQKAECIDIYGTGISYILAQSAAFKISTLGLECSAYESINSHYLAARKHKKN-I 179 Query: 183 LLAISYTGVRRELNLAADEMLRV-GGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 IS TG + A + V+ I G L++ + + + Sbjct: 180 AFLISLTGSNHTVICMAKYLREATETYVVGIAGPYHTELKKWCHEIVEIPNRDALLSLDV 239 Query: 242 ISACHAQGMLTDLLFIALIQQDLEL----APERIRHSEALVKK 280 I++ + D+ F L+ + E + E + H L + Sbjct: 240 ITSFSGATYILDIFFALLLSKRYEEHARSSMEMLNHLSLLWDE 282 >UniRef50_C5RF15 Transcriptional regulator, RpiR family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RF15_CLOCL Length = 289 Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats. Identities = 52/281 (18%), Positives = 119/281 (42%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN ++ + L +++K L Y+ P+ +S+ ++++ +S S++ + QKL Sbjct: 1 MNIFSKLN-KLTNLTENEKTLVSYMQDNPEGFVKMSALEISDACFISTSTIYRLCQKLDL 59 Query: 61 KGFPALKLALS-EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G LK+ +S E S+ + I+ ++ + KL + + ++LN+ Sbjct: 60 SGLSELKVQISLSINEYLKEQSSLDYNYPIKQNETQHQIVLKLKELYEQTLVSSLNLIDL 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E+L +L++A+ I + +NF +++ +IG + + L T S Sbjct: 120 EQLRLIANVLKNAQHIDFYTSAGNMYFVENFKFQMQEIGTFINVPIEEYHQLLTASTSDE 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN- 238 + + + +S+ G + AD + ++ I+ N L + A++ LY + E N Sbjct: 180 NHIAIVVSFEGRGVIIKRIADMLKVNKTPIILISSTNENPLTKYANYHLYLSSNENHFNK 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +S S + + D L+ + + ++ + Sbjct: 240 ISSFSTRLSLLYVLDCLYTCYFNLNYDKNVSYKLNAYKKLS 280 >UniRef50_B0PG82 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PG82_9FIRM Length = 296 Score = 153 bits (387), Expect = 5e-36, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 111/279 (39%), Gaps = 5/279 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +++ L +S+K A YL+ L+ ++ E S +++++ + +GY+G Sbjct: 11 LKTKLQLILPSLPRSEKAAATYLVENLHRIGSLNLNTISAETNSSGATIIRLCKHMGYRG 70 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F + ++ P +R + +I +N ++ TL + S+ + Sbjct: 71 FLDFRNSVR----MAEYPPYDGGDAVPAEHASIRELMCAVIDKNNETVHNTLALISD-QY 125 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 LR A I + G G + + Q K MK+G + D + + D+ Sbjct: 126 EPAALALREANIITMFGNGDAIIPCQLIGMKFMKVGKACVVLNDQDMQMFCASSIRSGDV 185 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 LA+S+TG + + A G + +T + L + S+ L+T ++ I Sbjct: 186 ALAVSHTGRSKSVVEAMRIAYERGAITIGVTASAKSPLLKHCSYALFTGTVDETDTGDII 245 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S A+ + + L++ + + E + ++ ++ Sbjct: 246 SRRIAEQTILETLYLRAVDDAGKDLEEVKKQGAKVIAQM 284 >UniRef50_D2AU61 Putative transcriptional regulator, RpiR family n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AU61_STRRD Length = 334 Score = 153 bits (387), Expect = 6e-36, Method: Composition-based stats. Identities = 58/282 (20%), Positives = 116/282 (41%), Gaps = 13/282 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + R+R+ G + ++ +A LL TA ++ +LA AGVS +VV+F +LG+ Sbjct: 55 SVAERVRRSLDGSSPGERLVARTLLASYPTAGLETAARLAERAGVSAPTVVRFVARLGFA 114 Query: 62 GFPALKLALSEALASQPESPSVPIHN--QIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ A + AL + + ++ SP D LR+ + ++ + S+ Sbjct: 115 GYRAFQQALRDEIEARRASPLTLAQQLGDGVTPDSLRVSAGAIFRQRL---DESFAALSD 171 Query: 120 EKLHECVTMLRS-ARRIILTGIGASGLVAQN--FAWKLMKIGFNAAAVRDMHALLATVQA 176 +L + +L ARRI + G S ++A+ +L++ G +L A Sbjct: 172 PELEAVLDLLADPARRIAMIGGRFSHILAEYLDLHLRLLRPGTRV-LDPRPESLAAFSVD 230 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 D+++ Y +R++ A + G KV+ T + + A + E + Sbjct: 231 VGRRDVIVVFDYRRYQRDVVEFARRVHERGAKVVLFTDPWLSPASEAADLVIPVRVEAPS 290 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + L + + ++ + + ER+R E +V Sbjct: 291 ----PFDSLVPALALVETVVAGVMARLGKEGEERLRQCEEIV 328 >UniRef50_C9RVZ8 Transcriptional regulator, RpiR family n=5 Tax=Bacillaceae RepID=C9RVZ8_GEOSY Length = 255 Score = 153 bits (387), Expect = 6e-36, Method: Composition-based stats. Identities = 38/260 (14%), Positives = 91/260 (35%), Gaps = 19/260 (7%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 ++ ++ D + DY++ P ++ ++LA VS +V++F +K+G +GF K Sbjct: 5 EQIAQFSELDYAIYDYVMKHPHEVAYMRIRELAEAVHVSPPTVLRFCKKVGCEGFSEFKT 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L + + + ++ + TL + E + + Sbjct: 65 KWKLYLRETKRTAII----------SSQEALKEFFE-------RTLTADYERTILDAAAA 107 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + A +I G G+SG++A+ + + ++D + + ++A+S Sbjct: 108 IARADHVIFVGSGSSGILAEYGSRYFSAFQKFSVYIKDPFFPIY--GHYFHNCAVIALSV 165 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 +G G +++IT L + + L A + ++ Sbjct: 166 SGETSYTLAQVHRFKENGSTIISITNRKHCTLANISDYNLTYYATPERIGQTDVTTQLPV 225 Query: 249 GMLTDLLFIALIQQDLELAP 268 L + L + + Sbjct: 226 VYLLERLAKEMYRLLGRKTE 245 >UniRef50_D1AP79 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AP79_SEBTE Length = 261 Score = 153 bits (386), Expect = 7e-36, Method: Composition-based stats. Identities = 58/266 (21%), Positives = 117/266 (43%), Gaps = 18/266 (6%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M IR +Y+ L +++K++ Y++ + R L + LA+ S +++V+ ++K+G+ Sbjct: 1 MKIENLIRDKYKNLNETEKEILRYIISNSNKIRGLRIKDLADAVFCSPNTIVRMSKKMGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF +K + E L I D + + + T + + E Sbjct: 61 TGFSEMKHVIFEELE------KNFSQVPISEDGLYKDLLK------------TKELINSE 102 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L ++ + I + G+G S L A F+ +L +G A + D HA+L + Sbjct: 103 LLDYLAALIVKKKNISIFGLGPSRLSADIFSMRLTFLGIAAISFIDQHAMLFYANKIKEN 162 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ L IS++G ++ + A G ++++TG + N L + A H ++ + A Sbjct: 163 DICLFISFSGEQKGILGPAVIAKGRKGVIISLTGLSDNELSRIADHSMFFKTTSMYYDGA 222 Query: 241 SISACHAQGMLTDLLFIALIQQDLEL 266 I++ M+ D LF ++ + Sbjct: 223 DITSRVPADMVLDYLFSKMVLIMKDE 248 >UniRef50_Q46ZY9 Transcriptional regulator, RpiR family n=74 Tax=Burkholderiales RepID=Q46ZY9_RALEJ Length = 358 Score = 153 bits (386), Expect = 7e-36, Method: Composition-based stats. Identities = 54/283 (19%), Positives = 105/283 (37%), Gaps = 8/283 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + RI + L + +++A+Y+L P A + + A VS ++ +FA+ LG+ Sbjct: 42 SISERIARSLPALTPAHQRMAEYVLANPFRAATMRIDEFATAVQVSVATANRFARALGFD 101 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+P + L + + +++ + A + AT + Sbjct: 102 GYPQFRAELVRGFEATLAPVER-LRSELERPTTAAEAFAASLDNAAANLEATRRALDADA 160 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA---SS 178 V+ + +A R+ + G GASG ++ L +V + S Sbjct: 161 CERAVSAILAAERVYIAGFGASGFLSGLLQHGLEMHCRMVTSVAGAGGASHAARQLFKLS 220 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P DL++AI++ + A G ++LA+T + L A LY A + Sbjct: 221 PADLVIAIAFPRYVSATVVLAQRAKARGARLLALTDGPTSPLAPIADIALYAQAANRL-- 278 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S ++ L + L A+ + +E L+ L Sbjct: 279 --SANSDANVLALIEALCGAVAHRAERPVKAAAEMTEFLLPWL 319 >UniRef50_A9H555 Putative uncharacterized protein n=1 Tax=Roseobacter litoralis Och 149 RepID=A9H555_9RHOB Length = 286 Score = 153 bits (386), Expect = 7e-36, Method: Composition-based stats. Identities = 55/284 (19%), Positives = 101/284 (35%), Gaps = 7/284 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M RI Y L+ + A ++ P S + +A +GVS ++ + A+ LGY Sbjct: 1 MTVQDRISGSYADLSDKLRVAAKFVSENPAEIATRSLRSVAQSSGVSPATFSRLARALGY 60 Query: 61 KGFPALKLA--LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 + + L+ L P S G + R + E A + + + Sbjct: 61 RDYEQLREEGRLVVERQMSPFSERAAKLRAQAGKEQGRALLEHQSAACIANVEKLVASVN 120 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQAS 177 + L V + A+ ++L G S V + N L AT+ Sbjct: 121 RDALERAVRQIDEAKTVLLVGSMGSAGVIDYLGYMGQWFKQNWKVAGRNGIELSATLSRI 180 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 + D+++ + R A G K + I+ + Q A+H + Sbjct: 181 NEGDVVVGLVKAPYARRTVAALKAAQDRGAKTVVISDSPTSPALQFANHSFIVATQSPQF 240 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+ A +L + + LI + A E+IR +E +++L Sbjct: 241 ----FSSYAATLVLLETIISMLIARAGPDAEEQIRAAEQTIERL 280 >UniRef50_B9R568 SIS domain protein n=2 Tax=Labrenzia RepID=B9R568_9RHOB Length = 289 Score = 153 bits (386), Expect = 8e-36, Method: Composition-based stats. Identities = 59/277 (21%), Positives = 108/277 (38%), Gaps = 11/277 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L IR R ++KK A L+ + + A AGVS ++++F +LG+ G Sbjct: 5 LLDDIRDRLDEFTATEKKAAHALMANYPVQGLGTVAEFAKAAGVSAPTILRFVARLGFPG 64 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F + L LA+Q SP + + VG+ + T + + +L Sbjct: 65 FAEFQKKLRSELANQLNSPLARSTSLAKDTTGDPHVGQ-----LIENIRETFDHLPKGEL 119 Query: 123 HECVTMLRSARRI-ILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL-ATVQASSPD 180 V +L R+ L G + +A+ A L + N V H + P Sbjct: 120 DGLVKLLADDRKTVHLIGGRFTDGLARYMAAHLRIVRPNVVHVAGQHGNWLDQLLGIGPK 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D++L + E+ A+ + G V +T + + + AS+ L + Sbjct: 180 DVVLVFDIRRYQAEIIQFAEAAAKQGATVALVTDSWMSPIGRIASYVLPARVAVPS---- 235 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + A + ++L + +++ + A ER+R EAL Sbjct: 236 PWDSSLALMAIAEVLIAGVTRENQDKAEERMRALEAL 272 >UniRef50_C6JLG4 Predicted protein n=2 Tax=Fusobacterium RepID=C6JLG4_FUSVA Length = 299 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 121/278 (43%), Gaps = 7/278 (2%) Query: 1 MNGLLRI-RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M G+ ++ R+ Y L +++K++A+Y+ ++S +L E VS ++V++F++K+G Sbjct: 12 MTGIAKLYRKNYNNLTKAEKQIAEYICENSKKVIMMTSLELGKELNVSDATVLRFSKKIG 71 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 + + LK L+E L ++ + N + V +K+I + M Sbjct: 72 FSKYNELKEYLAEELEARKSVIDKMLDNWNNDREDNNSV-KKMINADIKNMQKLYMDLDL 130 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASS 178 E++ V +++++++I + G+G+S VA+ W M +G A + + L + + Sbjct: 131 EEIDNAVKLMQTSKKIFVIGVGSSRAVAEMLGWHCMVLGLEAVTISEGGYGLFEKIAHVT 190 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 DD ++ S ++ + + + IT + + AS + + Sbjct: 191 KDDCVIFFSVPKYLKDEVQMMELLHAKKVPSVVITNNLFSKIASYASIFIPVETNNTSF- 249 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 ++ + +++ + L + D + + +E Sbjct: 250 ---FNSFILHAEVCNVILLKLFEGDRNRYFQYFKQNEK 284 >UniRef50_A1BAR1 Transcriptional regulator, RpiR family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1BAR1_PARDP Length = 294 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 60/280 (21%), Positives = 108/280 (38%), Gaps = 7/280 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R+ QR+ L +++ LA +L A S LA EAGVS +V++ QKLG++G Sbjct: 11 IEDRLMQRFGTLTPTERLLAGHLTRNFPVAGLASMTYLAKEAGVSTPTVLRLVQKLGFRG 70 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 +P + L + ++ ESP G P + + A + TL+ Sbjct: 71 YPEFQAQLRNEIEARLESPLSKHARWTDGV-PQTHILNRFADAVLANLTRTLSRIDHADF 129 Query: 123 HECVTMLRSARRIILT-GIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASSPD 180 C ML +R +L G + +A +L + +A+ + + P Sbjct: 130 DACAEMLADPKRRVLVTGGRITHALADYLVTQLGIVRPGVSALPSQSSTWPSALLEMRPG 189 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L+ A+ G V+ IT + + A E + Sbjct: 190 DVLIVFDIRRYESATLQLAEMAAERGADVVLITDPWISPISAHARFRFAAQIEVPS---- 245 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + A +L + L A+ + + A +R+ EAL ++ Sbjct: 246 AWDSSTALMVLIETLLAAVQELNWPQAQDRMTRLEALYER 285 >UniRef50_D2PSH8 Transcriptional regulator, RpiR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PSH8_9ACTO Length = 309 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 73/281 (25%), Positives = 125/281 (44%), Gaps = 15/281 (5%) Query: 1 MN---GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQK 57 M+ L R+R GL+ + ++A LL +P A L+ +LA G S +V +F + Sbjct: 1 MDDPGFLTRLRAEQPGLSGALGRIAAALLAEPGEAARLTITELAERTGTSPGTVTRFCRT 60 Query: 58 LGYKGFPALKLALSEALASQPES-PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNV 116 L GF LK+AL+E + S S I I D L V + ++ NT A+ T + Sbjct: 61 LRLAGFAELKVALAEEVGRAAPSRWSTDIGRSIEPADELDQVLKVIVGANTQALLDTADQ 120 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA 176 + E + AR I L G+G SG+ A +L +IGF ++H+ L +V Sbjct: 121 LDLGAVDEAARAISDARAIHLFGVGTSGITADELRIRLHRIGFACWVWPELHSALVSVAL 180 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT------ 230 + D+++ IS++G E G + +AIT +AL A L T Sbjct: 181 ADRRDVVIGISHSGQIAETIAVLRAAAARGARTIAITNDATSALAGEAGLVLATAQNGSA 240 Query: 231 -----IAEEQATNSASISACHAQGMLTDLLFIALIQQDLEL 266 ++ + +++ H+Q ++ D+L+ + Q + Sbjct: 241 LTTVPPGGAGSSQADALADRHSQFLVLDVLYTRVAQLNHAR 281 >UniRef50_UPI000196C8C2 hypothetical protein CATMIT_03055 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196C8C2 Length = 277 Score = 152 bits (384), Expect = 1e-35, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 110/279 (39%), Gaps = 4/279 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 ++ Q L +S+K L DY++ + ++S+ ++ + VS S++ + KL G Sbjct: 1 IYDKLEQL--SLTESEKTLIDYVVEHSEDIMNMSAADISKNSYVSVSTIYRIIDKLELSG 58 Query: 63 FPALKLALSEAL-ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 A K + Q E SV + R ++ + K++ +++TLN+ + ++ Sbjct: 59 LQAFKSHIHFDRERYQKELVSVDYNYPFRINNTNHEIMTKMLNLYDQTLHSTLNLVNLDE 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + V + A I L + +A+ F +++IG + + + + D Sbjct: 119 FGKIVQKMYDANVIALFPSIGNFFMAECFRQNMLEIGKDVIVEKQIFYQTKVAETLKKGD 178 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA-EEQATNSA 240 L + ISY + M + + I+ + L + + LY + E+ A Sbjct: 179 LAIVISYANRTPHVEDFIRVMNKNQVTTVLISSTKESELSKLVDYHLYFASYEDSEEKIA 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S S+ + L D L+ +D E + + Sbjct: 239 SFSSRVSLQFLLDCLYACYFNKDYEKNIDYRIEHYIELS 277 >UniRef50_C3RH23 Predicted protein n=2 Tax=Bacteria RepID=C3RH23_9MOLU Length = 294 Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 47/273 (17%), Positives = 105/273 (38%), Gaps = 2/273 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + ++ + L +K + DY++ P +S +LAN + S S++ + +KLG KG Sbjct: 13 IIDKMNT-LENLTNQEKAVVDYIIANPKALLEMSVNELANASYTSASTITRLCKKLGTKG 71 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + +K + + + + + + + A+ T ++ + Sbjct: 72 YADMKFIYVSEYSEMMKLKDSLKVVPFSRNSGIDDIIHTMPLIYSRAIDHTRSMLDRNTV 131 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD-D 181 +++ A+ I L G G + +A+N +KL +IG +A A + Sbjct: 132 IRVSNLMKRAQVIDLYGDGINFEIARNICYKLDEIGISANAYNSIQWNHCKRLQQDKIPS 191 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + +S+TG + AA + + L+ITG L + + E ++ Sbjct: 192 FSILLSHTGKNPSMVDAAKRLKQYNIPSLSITGNVDKRLLNLTDYNFQIMITENTFEFST 251 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 + + + D+L +LI + + + Sbjct: 252 VIFTMSSLYILDILVASLIVHNYDKIERHLEEL 284 >UniRef50_C0CJY4 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CJY4_9FIRM Length = 296 Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 114/280 (40%), Gaps = 7/280 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + ++ + S K +A+YL+ D + + LA + GVS ++V++F++ LGY+ Sbjct: 17 DFFHKLTDNFDAFTYSQKTVANYLIDNQDNVAFDTLEDLAEKIGVSTTTVIRFSRVLGYQ 76 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ ++ + + ++ P ++ + ++ + + TL++ ++ Sbjct: 77 GYSDMQKDIQNNVRTKAALPDRFDKTNLQIPKN--QLLQQSFTNDLNNIQKTLSLQKDQD 134 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQASSPD 180 L + + M+ A+ + + G+ AS +A FA ++ +I N + V ++ Sbjct: 135 LEQAIQMISDAQNVFVLGMRASFSIAHYFASRIGEIKANVRLISSTGLIYPEEVNSAQKG 194 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ +A + + G K++ IT ++ L Sbjct: 195 DVCVAYMFPRYCKTATTILSWFRSCGVKIILITSQNITSVTNYGDIILPCTVSSVYYK-- 252 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ A LT+ L AL Q E + + +E ++ + Sbjct: 253 --NSYAAPLCLTNFLIAALAQASPEESRAMLERTENILSQ 290 >UniRef50_C0ZE98 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZE98_BREBN Length = 295 Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 55/281 (19%), Positives = 111/281 (39%), Gaps = 6/281 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RIR++Y L S K + + +P +++++A S+++V++F LGY G Sbjct: 5 VKERIRKQYGKLTASQKIICKIAIEKPSLLAIHTAKKIAEFTNTSEATVIRFCYALGYSG 64 Query: 63 FPALKLALSEALASQPESPSV-PIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + L+ + ++L + + L ++++ + A + L Sbjct: 65 YTELQEEIKKSLLIGDQRKGPIQKYRDTEVTLDLSNYAHQVMESDIAYLQQGLQQIDYNL 124 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASSPD 180 LH+ V + A RI++ G + A+ L I N + + + Sbjct: 125 LHDVVKSIVQANRIVVVGFRWCHIPAKWLFSALNAIKGNTHLYTGAVDNADYFLTERDQE 184 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 L++AIS+ E +G K+LAIT + + Q A H L + Sbjct: 185 WLVIAISFPRHPSETVAMVHSAKELGAKILAITEGEFSPISQVADHLLKITTPQPV---- 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + S + ++L ++ D E +R++H + + KL Sbjct: 241 ATSGMPTLFSMLNVLIKGVMLHDSENVQKRLQHYDEISSKL 281 >UniRef50_C5CD76 Transcriptional regulator, RpiR family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CD76_KOSOT Length = 278 Score = 151 bits (382), Expect = 2e-35, Method: Composition-based stats. Identities = 68/278 (24%), Positives = 122/278 (43%), Gaps = 10/278 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L + +R L S++K+A Y+ P ++S Q LANE V S+V+K A+KLG+ Sbjct: 4 SFLNQFNERVGALTSSEEKVARYIKENPLKVVNMSIQSLANECFVVPSTVIKTAKKLGFS 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+AL+ L + D L ++ + + SEE Sbjct: 64 GFSELKIALAAELDKAAITGLD--------SDILSNTFKRYAEFVQELIEQASVRLSEEL 115 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L+E ++ A +I + G + + KL++IG A + + + + +D Sbjct: 116 LNEAARIVLEANKIDIYSFGFDSIAGLDLYLKLVQIGKTTAHYENGYMQMISATYLGTED 175 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++AIS TG ++L A + G KV+ I + + L + L T Sbjct: 176 AVIAISSTGSSKDLFDAVKRAIESGAKVIVI-APSSSMLAGLETVYLDTYFSTLVLPEGG 234 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 I+ Q L D L++ +++ D E + ER + +++ Sbjct: 235 IATRLVQLFLIDQLYLRILKMD-EKSSERYEKFQNVLE 271 >UniRef50_B4BI96 Transcriptional regulator, RpiR family n=1 Tax=Geobacillus sp. G11MC16 RepID=B4BI96_9BACI Length = 270 Score = 151 bits (382), Expect = 2e-35, Method: Composition-based stats. Identities = 44/260 (16%), Positives = 101/260 (38%), Gaps = 5/260 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L I +S+ +A+Y+L + +S LA S +++ +F Q+ Sbjct: 7 KLLNFIESSTDQ-TKSEIIIAEYILRNVEKIPKMSIYDLAEACHTSPATITRFCQRFENI 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F LK + + E A++ T + ++ Sbjct: 66 TFKELKEYARSFIEFNDTEVDCQNLKTKFNIKQ----INEYYDELHASLKQTEQLLRSKE 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V + ++++ G+ S L+A+N +K +++G A A + ++ ++ +P D Sbjct: 122 IIQVVHEIHRSKKVAFFGVTFSHLIARNAQFKFIRLGKYATAYSNHENQISEAESLTPRD 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L + IS++G R + + + G ++AITG L Q A + + + + + Sbjct: 182 LAVVISFSGETRFIVQLVKILKKRGIPIVAITGNEKGYLAQHAKQIIKVSSCKLKSFKSP 241 Query: 242 ISACHAQGMLTDLLFIALIQ 261 I + + +++ Sbjct: 242 ILEEINMLSVINSIYLVYSI 261 >UniRef50_Q2BFK6 Probable glucose kinase n=3 Tax=Firmicutes RepID=Q2BFK6_9BACI Length = 559 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 46/270 (17%), Positives = 103/270 (38%), Gaps = 11/270 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + I L + ++ +A Y++ ++ + + +L+ + VS++++ +F QKL + Sbjct: 300 SITTMIESNKHKLTKREELIAKYIISNVESVPNKTISELSKQINVSEATITRFCQKLEFG 359 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + L+L EA S + + + +K + LN Sbjct: 360 SYNKLRLMAKEASVSTRLHEQSDMPGLTEVKETYSSMLKKFDALHITNDMEQLNKL---- 415 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + ++ L GI VA+ +KL+K+G A A + + +VQ + Sbjct: 416 -------VAGSEQVYLYGINEMSHVAEQLKFKLLKLGIRADAFLTPYQMEMSVQTLTRKT 468 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++ ++ TG +E+ + + G K + IT + L + L + +S Sbjct: 469 AVVGLNTTGYAQEVIGMLETAKKAGCKTIGITSQQDSPLAHASDLRLLIPSAGDIAGDSS 528 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERI 271 + L D++ L + + I Sbjct: 529 SIEEVSALYLVDIILKELQAGLKQKERKEI 558 >UniRef50_A1WPP9 Transcriptional regulator, RpiR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WPP9_VEREI Length = 310 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 60/282 (21%), Positives = 113/282 (40%), Gaps = 13/282 (4%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 + R+ Y L +S +++ADY+L S ++LA A VS ++ +FA+ LGY + Sbjct: 16 IQRVAGMYAALPRSQQRIADYVLRHAFDVATASIEELAQAAKVSIATANRFARALGYSSY 75 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 P + L + + E I+ L +I ++ + AT ++++ + Sbjct: 76 PDFRADLLQVFKTALEPVEKL--RDIKPGTRLHDTLLAVIAQSVDNLQATRSMSNADAHE 133 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLA---TVQASSPD 180 V LR + R+ + G G+S +A + A+ L N ++ + + Sbjct: 134 HFVLALRQSERVYIVGFGSSAFLASSAAYHLGLYCPNVHSIGGEGGAEQAVRRMNQLTAQ 193 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL+ IS+ + + G V A+T + L Q A H LY A + Sbjct: 194 DLVFGISFPRYSADTVRLLHFAQQRGAVVAALTDAPTSPLVQLAQHVLYAKANSALLS-- 251 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 S+ A + + L L Q + + L ++L+ Sbjct: 252 --SSNVAALTVLEALGAMLAQ----GQSNALAQARDLAEQLM 287 >UniRef50_C1DL90 Sugar isomerase (SIS) n=48 Tax=Proteobacteria RepID=C1DL90_AZOVD Length = 310 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 50/274 (18%), Positives = 96/274 (35%), Gaps = 11/274 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L I Y+ L + K++A+Y+ Q D +A V S++V+F+Q+ G+KG Sbjct: 24 LLQLITAEYESLPRQLKRIANYMSQQSDRVMVDRVSDIAQHCEVHPSAIVRFSQRFGFKG 83 Query: 63 FPALKLALSEALASQPESPSVPIHN------QIRGDDPLRLVGEKLIKENTAAMYATLNV 116 F ++ EA + + + I + + Sbjct: 84 FSEMQALFREAYTDKATPIQNYQQRIRRMIANRSHKASGGELARECINATRSGLDRLAQE 143 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQ 175 E + + V +L A I + G+ S VA + L + ++ Sbjct: 144 LDEREFDKAVDLLVEADNIYVVGVRRSFAVAHYMVYSLQHTNKRIHLISGLGGGYREQMR 203 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 + DL++A+S++ +E + L IT L ++A+ L Sbjct: 204 SVREGDLVVAVSFSPYGKETQQCVRIARHHKARALVITDSQLAPLAKQANALLLV----N 259 Query: 236 ATNSASISACHAQGMLTDLLFIALIQQDLELAPE 269 ++ + + A L LFIA+ + E Sbjct: 260 EGSTFAFRSLSATLSLCQALFIAVAYRMELKVEE 293 >UniRef50_A6VVN8 Transcriptional regulator, RpiR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VVN8_MARMS Length = 286 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 55/270 (20%), Positives = 108/270 (40%), Gaps = 8/270 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 I + Y L++ +++A +LL P+T + LA + V S++V+FA Y G Sbjct: 10 LQQAISRNYDDLSKRLQQVARFLLEHPNTVALETVASLAEQCDVPPSTLVRFAAAFEYNG 69 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPL---RLVGEKLIKENTAAMYATLNVNSE 119 F ++ +AL Q S S I + E+ N +M + S+ Sbjct: 70 FSEMQNLFRQALVEQTSSYSERIKLSKSTASTTIDASHILEEFSSSNAFSMNHMNHHFSQ 129 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASS 178 E L++ V +L +A+ I L G+ + ++ FA+ L + + L+ Sbjct: 130 EMLNKAVDLLENAQNIYLIGLRRAFPISSYFAYSLRHLDKTTHLIDGGGGMLIEQASNIR 189 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 +D+++A +++ +E ++ + G +V+AIT + L + C E Sbjct: 190 ENDVIIATAFSPYAKETVNVSEYAFKAGAQVIAITDSKISPLAALSDVCFDIKEAEVL-- 247 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAP 268 + + L L +AL + Sbjct: 248 --GFRSLTSSMTLAQTLLVALAYRLNSDGK 275 >UniRef50_C6JEA0 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEA0_9FIRM Length = 291 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 52/282 (18%), Positives = 121/282 (42%), Gaps = 11/282 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ I ++ L+ +K+A+Y+L D + + +L+ + VS+++V++FA LG+ Sbjct: 15 MSLDQLIYEKIPSLSAGQRKVAEYILNNKDEFSYATLAKLSKDISVSETTVIRFAYSLGF 74 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F A++ L E + S P+ + +K+ T A+ ++ +EE Sbjct: 75 DSFSAMQQKLREEILSVPQRNVEGQIQN-------QTFYQKVFSRETQALQDWISHINEE 127 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLAT-VQASSP 179 L + V L +A I++TG +S A F +L + N +++ + + + Sbjct: 128 LLDKTVEALLNADHILVTGARSSYHAANWFGNRLNLLLGNTHIIQEFYDPRFDLLNHITD 187 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 ++++I++ + AD ++G +++IT + + + + +S Sbjct: 188 KTVVISIAFARYTKWTYRYADSAKKMGATLVSITDSVSSPFFNISHYTILAA---PVKDS 244 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+ L D + + + ++ ER++ E + Sbjct: 245 MGFSSPICMYCLFDAIISKIHDERKDMIVERLKQYEDTYRDF 286 >UniRef50_B5XS91 Transcriptional regulator, RpiR family n=3 Tax=Enterobacteriaceae RepID=B5XS91_KLEP3 Length = 285 Score = 150 bits (380), Expect = 4e-35, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 115/279 (41%), Gaps = 7/279 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN +I + GL+ ++ A++ L LS + A EAGV +++++ AQ+LGY Sbjct: 1 MNLREKIINEFGGLSPELQRAAEFSLQNASQLVVLSMRAFAAEAGVKPATLLRLAQRLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +G+ LK + L + ++ + + +++ + + A + T N + + Sbjct: 61 RGWSELKSDFIDDLGLRNDTYVSKAEKMMA-RGTQTQLYKEVFQAHQANLTFTQNE-NAQ 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASSP 179 ++ + VT+L SA + + G AS +A + + + + + + + Sbjct: 119 EMEQAVTLLDSAENVYICGFRASFPIAWSLFYVYRLFNRQVSLIDGLASNIEVFTRELTN 178 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D +L S+ RE + G K+LAIT + L Q A L + + Sbjct: 179 RDCVLLTSFAPYSRESLDVLRAARQAGAKILAITDSPVSPLAQAADCTLLFSIDSPSF-- 236 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + + L + L L+ + A +I +E + Sbjct: 237 --FPSVVSGMGLAECLLAMLVVRHGREAVSKIESAERYL 273 >UniRef50_B9Y4Q7 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=B9Y4Q7_9FIRM Length = 289 Score = 150 bits (379), Expect = 5e-35, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 116/283 (40%), Gaps = 2/283 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN L ++ + + + +++ L D +L P++ +++A+ VS ++ + KLG Sbjct: 1 MNLLKKL-ENLENVTPNERILIDAILKDPESFIAAKPKEIASLTYVSVPTIYRLINKLGL 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G LKL L +AL S+ E P I I D + + L T + TL+++ ++ Sbjct: 60 SGVNDLKLQLQDALRSETEVPVESIDFPISPTDTVNEILLHLKDVYTQTIEDTLSLSDQQ 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + +++ A I + + A+NF +++ +I N + + + Sbjct: 120 VLVDVSALMKQAAFIDVYASAGNLFFARNFQFQMQEINVNVNVPEAEYMQKLSAGNADAR 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN-S 239 L + IS+ G +N + ++ IT N L + A + +Y + E Sbjct: 180 HLSIVISFGGRGGSMNTVCQILSDNHSPIVLITSTQKNPLTRFAQYKIYMSSYENHYQKI 239 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 +S S + D L+ + + R + + + + Sbjct: 240 SSFSTRMTLLYILDTLYSIYFRLQYDELLNRKLTTYEKIHRRL 282 >UniRef50_UPI0001BC5E7D RpiR family transcriptional regulator n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=UPI0001BC5E7D Length = 284 Score = 150 bits (379), Expect = 5e-35, Method: Composition-based stats. Identities = 56/284 (19%), Positives = 119/284 (41%), Gaps = 8/284 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + L DK + DY+L TA L+S ++A VS SSVV+ ++K+G+ Sbjct: 1 MKTTIENSSYKSDLTNKDKIILDYILRNKKTACFLTSNEIAELLNVSPSSVVRLSKKIGF 60 Query: 61 KGFPALKLALSEALASQPES--PSVPIHNQIRGDDPLRLV--GEKLIKENTAAMYATLNV 116 + F A K AL +A Q S + + +I D L + + + + A ++ Sbjct: 61 ENFSAFKKALQMEIAEQEPSLDANEIPYEKIEQYDKLSDIELIKAFRQNVLKNITADISS 120 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA 176 ++K E ++ A+R+ + G A +A F L I + + + ++ + Sbjct: 121 KEDKKFIESADIISKAKRVFIVGYRACAGLASTFGIMLSCIRPDVFVLNNNGPIVDRLID 180 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 +D+++AIS+ A G K+++ T F + + Q + E + Sbjct: 181 LGKNDVVVAISFNRYSGNTKFAVQIARDAGAKIISFTDFYTSPIAQGVDKVIINSVENFS 240 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ + M + + + ++++ +R+ E +++ Sbjct: 241 F----YNSYASSMMNIETIVALVSKKNMAANKKRLMKMETYLEQ 280 >UniRef50_Q0KEK8 Transcriptional regulator, GlvR-family n=57 Tax=Burkholderiaceae RepID=Q0KEK8_RALEH Length = 302 Score = 150 bits (378), Expect = 6e-35, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 109/274 (39%), Gaps = 7/274 (2%) Query: 8 RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALK 67 R + L+ + A YLL P LS +++A AGV +++V+ +Q LG++G+ L+ Sbjct: 25 RSNFPTLSTQFQGGARYLLDHPQDVPVLSMRKIAASAGVQPATLVRLSQHLGFEGWQGLR 84 Query: 68 LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 +AL + + +R R + +++ + + N+E+ L + Sbjct: 85 ELFVDALRGGSQPYARRARKVVRESSSSR-MLGEILDAQHHNL-DMIAANNEKTLQQAAE 142 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASSPDDLLLAI 186 +L A + + G + +A F + + D L ++ +P D +L + Sbjct: 143 LLSHAACVHVAGFRSCFPIAFTFHYVYRLFRSTVHLIRADAGTLEMELRGLAPKDAVLVV 202 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S+ +E A G KV+A+T T + A L E + + Sbjct: 203 SFAPYSQESIRVAAAARECGCKVIALTDSTVAPIALAADCTLLFSVESPSF----FPSVT 258 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A + + L L+ + + A + +E + + Sbjct: 259 AGVAVVEALVEQLLARKGKGAIRALEQAEGELHR 292 >UniRef50_A7GA30 Transcriptional regulator, RpiR family n=10 Tax=Clostridium RepID=A7GA30_CLOBL Length = 259 Score = 150 bits (378), Expect = 6e-35, Method: Composition-based stats. Identities = 51/264 (19%), Positives = 99/264 (37%), Gaps = 12/264 (4%) Query: 8 RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALK 67 L QS+ + Y+ + + +S Q+L+ + S +++++ +KL GF LK Sbjct: 7 NNILNTLTQSELSVLQYIDVHSNEVLTMSIQELSEKVFFSTATILRLCKKLNLSGFSELK 66 Query: 68 LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 L ++S S I +K++ + + + T + + L V+ Sbjct: 67 FTLKNNVSSNNSLKSTAIST------------KKIVTDLYSEIENTGRLLDTKTLDTIVS 114 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAIS 187 L S ++I L G + + + L+ G + V + +D+L S Sbjct: 115 YLLSNKKIHLFSYGLTNMAFEYMQRYLLATGRQTILYKTDTLAYKAVNNLTENDVLFLSS 174 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHA 247 TG A ++AIT FT N L + A LYT +E+ + I Sbjct: 175 STGSNPSTLKLAKIAKNSNTIIVAITPFTNNPLSKIADINLYTFIKERDFFDSDIKNRTC 234 Query: 248 QGMLTDLLFIALIQQDLELAPERI 271 + D++ I+ + + Sbjct: 235 IFYIVDMIIECYIKYLDKSKFNNL 258 >UniRef50_B0NY52 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NY52_9CLOT Length = 256 Score = 150 bits (378), Expect = 7e-35, Method: Composition-based stats. Identities = 51/272 (18%), Positives = 109/272 (40%), Gaps = 22/272 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + Q L+++D + DY+ +++ ++LA + VS+++V++F +KL Sbjct: 1 MRLEELLNQYSDRLSENDLYIWDYVEKHKKQCENMTIEELARKCNVSRTTVLRFTKKLSL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGF K+ L + + S + + ++ ++ + ++ Sbjct: 61 KGFGEFKVHLRMENDDKKQDTSKAVKVCLAYEEMMQDMVQQ------------------- 101 Query: 121 KLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E ++ A+RI + G G +VA+ F M V+ Sbjct: 102 DFKEISELIYQAKRIFVYGTGMVQKIVAKEFKRLFYFTDKRFYDFSGMTEYETVVKYVDS 161 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE--EQAT 237 DDL+L IS +G A ++ G +++IT N L + +++ LY EQ Sbjct: 162 DDLVLIISVSGEADFTIDFAKKVRIKGTPIISITKQKKNPLAEISNYNLYISTTMVEQNL 221 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPE 269 + + +L +++F+ ++ E + Sbjct: 222 CKGRYESMTSYYILAEMMFLRYLEYLEERSQS 253 >UniRef50_UPI0000D541FA probable transcriptional regulator n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D541FA Length = 207 Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats. Identities = 44/208 (21%), Positives = 101/208 (48%), Gaps = 4/208 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L +I+ L +S++K+ +++L P + + + + ++ G+S+ ++++F + +G+ Sbjct: 4 KLLRQIKNSLSDLRKSEQKVGEFILNDPKSVITMKTAEASSAMGISEPTLIRFCKAIGFT 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+ LS+ Q + + +I DD + + EK+ + + + + ++ Sbjct: 64 GFQDLKINLSQ----QLAADDYFVMYEINEDDSIHELCEKVFDTSISEILNVRSQIDQDI 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + L +A+R+ G S VA + K ++ ++ + D H + + DD Sbjct: 120 LENAIETLVNAKRVEFYAFGGSAPVAMDGQHKFFRLKIPSSYISDPHLQFMSANSLERDD 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKV 209 +++AIS +G L + + + G KV Sbjct: 180 VVVAISQSGTTTALIESVKIVRKNGAKV 207 >UniRef50_UPI00019039EA RpiR family transcriptional regulator n=2 Tax=Rhizobium etli RepID=UPI00019039EA Length = 290 Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats. Identities = 59/277 (21%), Positives = 114/277 (41%), Gaps = 8/277 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RI+ +Y L S++ LAD +L P S+ +L+ VS+++V +F ++LGY+ Sbjct: 11 LEERIQSQYDDLPGSERALADLILEFPGDLLVYSATELSERGRVSKAAVTRFVKRLGYQD 70 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + ++ + EA Q V ++ + G P R ++ ++ + A + T S + L Sbjct: 71 YREMQREVREA---QEAGEPVYLNTGLLGPAPDRTRLQQHLERDIANLRQTFEAVSPDDL 127 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQASSPDD 181 E V +ARR+ + G S A +L+++ + V L+ + ++PDD Sbjct: 128 GEVVRRCLTARRVWVLGFRNSYFFAAYIRRQLIQVRSDVTLVPAAGQTLMEELAGATPDD 187 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++A+ L A + +G + T + A+ + Sbjct: 188 LMIAVGLRRRTSALGRAMKIVRDLGVPIAFFTDRVAVTTPKFATWTFPCQVRGMSL---- 243 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + A L + L ++ E ER+ E L Sbjct: 244 FDSYVAVISLANYLCTEVVAAAGEGGRERLSRIEDLF 280 >UniRef50_A9BVS1 Transcriptional regulator, RpiR family n=4 Tax=cellular organisms RepID=A9BVS1_DELAS Length = 292 Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats. Identities = 54/279 (19%), Positives = 112/279 (40%), Gaps = 6/279 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ IRQR+ L+ + +++A ++L P+ S + + AG +++V+FAQ LG+ Sbjct: 1 MSVQDDIRQRFAELSPALQQVARFVLEHPNDVVTASMRSVGTRAGSPPATLVRFAQWLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+P LK A ++ + + + G + + + + + +T + Sbjct: 61 DGWPQLKQAFAQDMGLGSDEAYGQRAKALVGRAGDHDLVGETFEVHRRNLESTERRL-GD 119 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASSP 179 L + +L AR + + G AS VA +F + + + + L +A Sbjct: 120 ALQQACALLEKARSVHVAGFRASYPVAFSFVYVYRLLRASVHLLDGQGGTLEMQCRAMER 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D LL +++ RE G +++A+T + L A L + Sbjct: 180 GDALLVVAFAPYSREALAVTQAARDAGCRIVALTDSPASPLALLADATLLFSLHSPSF-- 237 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + + L++ L L + + +RI +E + Sbjct: 238 --FPSITSAVALSEALVELLASRAGKGVVQRIGQAEEQL 274 >UniRef50_D0BLW5 Transcriptional regulator, RpiR family n=3 Tax=Granulicatella RepID=D0BLW5_9LACT Length = 268 Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats. Identities = 77/272 (28%), Positives = 134/272 (49%), Gaps = 7/272 (2%) Query: 10 RYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLA 69 L +DKK+A+Y+ T S LAN GVS SS+ K+ +K+GY + K+ Sbjct: 1 MKDFLTDTDKKIANYIEQNISTVLSSSIHDLANLIGVSSSSISKYIKKIGYASYSRFKVV 60 Query: 70 LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTML 129 L++ + PI Q+ +D ++ + KL T + TL + ++E L V + Sbjct: 61 LAQ-------QNAQPIDAQLDSNDTIKTIQSKLFHTITRSYEMTLELLNDELLETIVQQI 113 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYT 189 SARRI + G+GASG+V + +KL +IG N D H LA++ ++ D ++ ISY+ Sbjct: 114 HSARRIYMFGVGASGMVCNDLYFKLSRIGKNIIYHTDSHIQLASLSGATNQDFIIGISYS 173 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQG 249 +E+ A + L+ITG L +++ L E S++I++ + Sbjct: 174 SNTKEVITAFKIAKELSIPTLSITGIGNQQLDSLSTYQLKIPRHENTIRSSAITSRNDSF 233 Query: 250 MLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 L D+L++AL+Q++ + + S + L Sbjct: 234 FLIDILYLALLQKEEHRHFQNLEKSYRMTHPL 265 >UniRef50_Q4KEH9 Transcriptional regulator, putative n=8 Tax=Pseudomonas RepID=Q4KEH9_PSEF5 Length = 284 Score = 148 bits (375), Expect = 1e-34, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 96/281 (34%), Gaps = 8/281 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + I L S++K+ LL +LA AGVS ++V+ +KLG+ Sbjct: 3 SLRDLITDPALDLTPSERKVVRALLDHYPRNGLGPMSRLAEHAGVSDPTIVRLVKKLGFS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + AL + + SPS + + + + + ++ + T + E Sbjct: 63 GYGEFQEALLSDMDDRLRSPSTLLRPRSQVA--QGDTWGRYLADSQRVLQDTQALTQPED 120 Query: 122 LHECVTMLRSARR-IILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + L +R + G S +A L + + D L + Sbjct: 121 IRVLMDWLLDSRHSVYCFGGRFSSFLALYLFNHLRLMRPGCFFLDDNAQLPDRLFDVQRQ 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL+L Y + + A + +V+ T + L++ A + E + + Sbjct: 181 DLVLLFDYRRYQSQAMRVASAVKARNARVVLFTDIYASPLRELADLVISAPVE----SLS 236 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + L L + +R+ +AL + Sbjct: 237 PFDTLVPALAQVEALVACLTPR-SPHLDQRLEGIDALRAEF 276 >UniRef50_C1I751 Predicted protein n=3 Tax=Bacteria RepID=C1I751_9CLOT Length = 246 Score = 148 bits (375), Expect = 1e-34, Method: Composition-based stats. Identities = 47/255 (18%), Positives = 96/255 (37%), Gaps = 16/255 (6%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 + + + L S++K+ Y+ + LA E S++ ++ +QKLG++GF Sbjct: 2 ENLAKLFNKLTNSEQKVFTYIYANQQKVIKMKINDLAKETFTSKTVIINLSQKLGFEGFS 61 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 LK L D V E L + T V + + Sbjct: 62 DLKYYLKSN----------------NSADDDIKVLEDLQYGLKQNIEKTFVVIEADLYKK 105 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 + A+ + + G S L+ +G V+D + L D+L++ Sbjct: 106 ISREVIEAKTVYVFARGTSKAAGYYLNHLLLTLGVKCIFVKDYNLLTLVGNTLESDELVI 165 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 IS +G ++ A+ G + +AIT F N L + + + L+ ++ + T + Sbjct: 166 LISLSGNTEKILEVANIAKVKGSRTIAITSFGNNELSKISDYTLHCVSNDTETKFNDSIS 225 Query: 245 CHAQGMLTDLLFIAL 259 ++ ++L ++ Sbjct: 226 RIGMFIVIEMLVNSI 240 >UniRef50_Q9KGC3 BH0181 protein n=3 Tax=Bacillus RepID=Q9KGC3_BACHD Length = 241 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 41/256 (16%), Positives = 101/256 (39%), Gaps = 19/256 (7%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 + + + + +Y+ + ++ ++LA+E VS +++++F +K+ GF K+ Sbjct: 5 EVIASFNELEMSIYNYICQHAEKVAYMRIRELADETHVSTATILRFCRKVDCDGFSEFKV 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L L + ++P + EE++ E + Sbjct: 65 KLKMHLEKEKKAPIKSSQ-----------------HAIAEFFERAFRGDLEERISEAAAL 107 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + A +I GIG+SG++A+ A +G + ++D + + + +A+S Sbjct: 108 VADAENVIFIGIGSSGILAEYGARYFSALGKLSMYIKDFSYPIH--SKLRQNSVTIALSV 165 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 +G +++ + G K+++IT + + + A L E+ A+I+ Sbjct: 166 SGETHFTITQVNQLKQEGSKIISITNNKFSTIAKVADVNLSYYVSEEFFEKANITTQVPV 225 Query: 249 GMLTDLLFIALIQQDL 264 + + + L + Sbjct: 226 VYILEAMARELYKLQG 241 >UniRef50_B9DUA5 Putative transcriptional regulator n=1 Tax=Streptococcus uberis 0140J RepID=B9DUA5_STRU0 Length = 290 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 50/281 (17%), Positives = 108/281 (38%), Gaps = 4/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + + ++ ++L + + LS Q +A + S++V+ A+KLG+ Sbjct: 1 MLIKEELETY--PFSPAEAVTVAFILREVEVLESLSIQAIAKKTYTQPSTLVRIAKKLGF 58 Query: 61 KGFPALKLA-LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 KG+ K A L+E V + D + +K+ A + +++ Sbjct: 59 KGWVDFKKAYLAEHDYLTRSFTKVDSNIPFSALDNPMSIAKKIGILEKATIDDLISLLHY 118 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++L + +L A I + A+ ++A++FA K+ +IG + P Sbjct: 119 DQLSKAKKLLSQAEMIYIFAQSANIILAEDFALKMRRIGKTVHIATTLGEERYVAHNMMP 178 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN- 238 + + + IS +G + + + K + IT N L Q L E+ + Sbjct: 179 NAIAIFISTSGETQPILDIVSIAKKAKIKTIGITSIGNNQLSQEVDLFLPMTTREKLFSK 238 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + + + +L D+L+ + E ++ S + Sbjct: 239 IGNFTTNISVHVLLDILYSLTFSSQYDFHLEHLKESGQKID 279 >UniRef50_A9BZX9 Transcriptional regulator, RpiR family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BZX9_DELAS Length = 325 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 59/285 (20%), Positives = 109/285 (38%), Gaps = 11/285 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +R G + + ++ ++ P A LS++++AN G S ++V +FA+ GY+G Sbjct: 19 VQELLRASVDG-SPAVARVGRWMAAHPVLAVTLSAEEVANACGGSLAAVNRFAKHAGYEG 77 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDP---LRLVGEKLIKENTAAMYATLNVNSE 119 F L+L L L E + + +GE+ + + A Sbjct: 78 FADLRLHLGRQLQQALEPVNKLRAAHGPEAATAGAVGTMGEQAFRHTQRNLQAAAQACDP 137 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR---DMHALLATVQA 176 L + + ARR++ G G+S VA A L V + + Sbjct: 138 GLLDQLAQRICRARRVLFMGFGSSHHVAAFGADVLQPYLPQVVEVTSAGGSEQAVRRMTG 197 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 + D+L+AIS RE + G +AIT + + L + A + L A Sbjct: 198 LTEQDVLIAISLPRYSREAVALTAHARQRGALTIAITDESTSPLAREADYTLLAPASHPL 257 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+ + A + + L +I+ + + SE+++ L Sbjct: 258 LPSSPM----AAMAMVEALATQVIRATPQAVRSLVELSESVLPYL 298 >UniRef50_C1TN65 Transcriptional regulator n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TN65_9BACT Length = 279 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 109/280 (38%), Gaps = 11/280 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +I + + + K+A ++L P A +++ Q+A S+SSV++FA LGY G Sbjct: 2 LKEKIIAGMKDFSTTQAKVARFILENPREAPFMTANQMAESVDTSESSVIRFASMLGYSG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 +P LK A+ L Q + + +++ + + + + + + Sbjct: 62 YPELKEAMKSLLLDQMTTIERMAVYDDDPRESP---CHRIMTLDMLDLGESQTNLNPQGI 118 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + A I + +S +A ++ L + + D + + + + Sbjct: 119 RSWASEVLEAPAIYMAAQRSSLALAGYLSFYLSWFHPSVHQLNDT-LIREQMTTAPKGSM 177 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRAS--HCLYTIAEEQATNSA 240 ++ IS+ R A +G + AI+ N + + A H L + Sbjct: 178 MIGISFPRYSRWTVDAMKLGRSLGLTLTAISDSPHNPMTE-ADPEHVLTAPCRHISF--- 233 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 I + A L + L +A+ + + A +R++ E L + Sbjct: 234 -IDSLTAPMSLMNCLIMAVADEMGDEAKKRLQELEELWTE 272 >UniRef50_Q5LQ93 Transcriptional regulator, RpiR family n=5 Tax=Rhodobacteraceae RepID=Q5LQ93_SILPO Length = 290 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 57/279 (20%), Positives = 100/279 (35%), Gaps = 7/279 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RI+ + L +S+++LA LL S +LA AGVS +V++ A+KLG+ G Sbjct: 8 VKQRIQDETEQLTRSERQLASILLQDYPMGGLQSITKLAVAAGVSTPTVIRMARKLGFDG 67 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 FPAL+ AL E +A+Q + P + + + + A M TL Sbjct: 68 FPALQDALREEVAAQIKKPISKRDGWVVDEGAEHPLMR-FAQVVWANMRHTLERTDTALF 126 Query: 123 HECVTMLRS-ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASSPD 180 +L +R + + G + A + I N + + + Sbjct: 127 DRAAAILADTSRPLYVVGGRITRSNADYLYNHMQIIRPNVTMLGNSANVWPQYLLDMDQS 186 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +L+ L A G V+ T + + + A + Sbjct: 187 SVLVIFDIRRYEAHLEKLAQIASERGVTVILFTDQWGSPIGRVADLTF----NGLVEAPS 242 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S + A ++ + L + E + ERI EA+ Sbjct: 243 SWDSTIALQLIVEALIAEVQGARWEESKERIEELEAMFS 281 >UniRef50_C8SN57 Transcriptional regulator, RpiR family n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SN57_9RHIZ Length = 301 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 55/282 (19%), Positives = 113/282 (40%), Gaps = 10/282 (3%) Query: 1 MN---GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQK 57 M+ +I + G++ + A Y+L +P+ LS ++ A +AGV +++ + AQ Sbjct: 1 MDQGELAGQIVSAFDGMSAQLQSAARYVLDRPEDVALLSMREQARQAGVQPATMTRLAQY 60 Query: 58 LGYKGFPALKLALSEALASQPESPSVPIHNQIRGD--DPLRLVGEKLIKENTAAMYATLN 115 LG G+ A++ + A+ S+ + Q+ + +++ + Sbjct: 61 LGLDGYEAVRDIHAAAVRSRGVGFAGKAGVQVASQRLKGDHALVADMLRSLAGQIAHLAE 120 Query: 116 VNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG-FNAAAVRDMHALLATV 174 ++ E+L L +ARR+ G+ +S VA + + L IG + + Sbjct: 121 PSTIERLVTTAKALTAARRVYCLGMRSSHAVAWHLHYILSLIGEKSVMLHGAGGTDGDVL 180 Query: 175 QASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE 234 ++ +DLL+A S R A+ G ++A+T L Q A H + Sbjct: 181 GRATGEDLLIAASVLPYTRLTIELAEYAAGRGVPIVAVTDSEVAPLAQLADHLIIVPTAS 240 Query: 235 QATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + +++++L + Q E A E +R + Sbjct: 241 PSF----FHTMTQAFIVSEVLGALVAGQAGEGAIEALRRFDE 278 >UniRef50_B6GAY7 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GAY7_9ACTN Length = 288 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 118/258 (45%), Gaps = 4/258 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I Y L+ ++ +ADY++ P ++++ +A E+ S +SV +FA++LGY+ Sbjct: 6 SVINEICSLYDQLSDGERSIADYMMANPFDVASMTTRDIAQESETSAASVSRFARRLGYE 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F AL+ AL + + D E ++ + TL++ + Sbjct: 66 SFSALRQALLRD----EAAYDDRGQLAVISIDAPAAALETVLMVKNRELTDTLSLLDARE 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L V +L + I +G + VA + ++ L ++G A A++ + +P D Sbjct: 122 LVRAVHLLERSVSITFAAVGNTIPVALSASFLLGQLGLRCACAPTTEAMMLDSLSLTPRD 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++ +S +G + LN D ++ + IT + L +RA+ L+ ++ ++ Sbjct: 182 VIVFLSKSGHSKRLNKMMDNVIDSETPTIVITNQPSSPLARRATCVLHAATHDKMLSTEL 241 Query: 242 ISACHAQGMLTDLLFIAL 259 + ++ + ++LF+ L Sbjct: 242 PFSHNSINYIIEVLFLLL 259 >UniRef50_Q03HE1 Transcriptional regulator n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03HE1_PEDPA Length = 251 Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats. Identities = 49/247 (19%), Positives = 98/247 (39%), Gaps = 17/247 (6%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 ++ Q L Q + + Y+ + + ++ + L+ ++ VS +++++F +K+G++GF K Sbjct: 5 EKVQTLNQLELFVYKYVTSHLEECKTMTIRDLSTQSHVSSTTILRFLKKMGFEGFSDFKY 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L P S I + T EK+ E + Sbjct: 65 VLRHRNDRTPASELSQDLGPIG-----------------QFLKQTATTEYTEKMEEVARV 107 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + + + G+G+SG +AQ A L G A+ D + L++ +S Sbjct: 108 VAQSNTRLFFGMGSSGSMAQYGARILSNYGMLTLAITDPFQPQPISERDYSKTLIILLSV 167 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 +G + A+ + G K++AIT + + L Q A + L E S + ++ Sbjct: 168 SGETEGVLTQANYYRQNGAKIVAITANSTSTLAQIADYSLTYDIPENKVGSLNFTSQIPV 227 Query: 249 GMLTDLL 255 L + L Sbjct: 228 VYLLEQL 234 >UniRef50_Q6MTZ4 Transcription regulator gntR n=2 Tax=Mycoplasma mycoides RepID=Q6MTZ4_MYCMS Length = 278 Score = 147 bits (372), Expect = 3e-34, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 111/261 (42%), Gaps = 7/261 (2%) Query: 21 LADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPES 80 +A+Y+L D+ ++ QLA S +++ +F + L G+ L + + Sbjct: 25 IANYVLSNLDSIEKMTINQLAKATYTSVATINRFVKFLNLDGYKELVHIIK---YFKNSL 81 Query: 81 PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGI 140 I + + + +I T+ + ++ ++ A +I + + Sbjct: 82 QGDQITYSLTSNSLILNAYNNIISSLDETSKLTIEQQD--TIKNLISKIKKALKIAVFAV 139 Query: 141 GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAAD 200 G + +A++F KL++IGFN AV D H + +DL + +SY+G +L A Sbjct: 140 GGTFNIAKDFQQKLLRIGFNITAVNDFHNGYLLANQLNNNDLAIFVSYSGETLDLIKLAQ 199 Query: 201 EMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALI 260 ++ ++ + T N L +++ + + E+ S ++ + DL++I L+ Sbjct: 200 VCIKNNVQIAVVCKATNNTLSNLSNYLINISSNEKIDRLVSTTSRFSLLFALDLIYIFLL 259 Query: 261 QQDLELAPERIRHSEALVKKL 281 DL+ E + + ++ K Sbjct: 260 STDLKNYTELLEKT--MISKF 278 >UniRef50_C6JLR3 Transcription regulator n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JLR3_FUSVA Length = 281 Score = 147 bits (372), Expect = 3e-34, Method: Composition-based stats. Identities = 43/280 (15%), Positives = 108/280 (38%), Gaps = 8/280 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + I+++Y L +S K +AD++ LS ++++ G+S +++++F Q +KG Sbjct: 5 IINIIKEQYGELTKSFKVMADFIFENITQIPFLSIKEISEITGLSSATIIRFTQYFKFKG 64 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 +P + + E L + + I + + +I +N + N N +E Sbjct: 65 YPEFQKNIQEILKKEITPMKEFKES-ILQTGEEETLLDDVILQNIEILKKLPNENLKENF 123 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNA-AAVRDMHALLATVQASSPDD 181 + + ++ ++ +I + +S + F + L + N + + +D Sbjct: 124 KKALEIIENSGKIYIVSSRSSYSLGYYFYFMLKEFKENVEIIISGTEDYTHKLLYLKEND 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L IS+ A + K++ +T + + L + E+ Sbjct: 184 VLFTISFHAYTDFTYKIAQFFKKRNNKIICLTDTLTSPFALISDCALLSKNGEK------ 237 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + + L I L + + E E + + + ++ Sbjct: 238 TYSFVGAMTILNALCIKLAKLNKENTLESLEKLKEIAMEM 277 >UniRef50_A8U8R6 Putative uncharacterized protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8U8R6_9LACT Length = 256 Score = 147 bits (372), Expect = 3e-34, Method: Composition-based stats. Identities = 58/272 (21%), Positives = 108/272 (39%), Gaps = 18/272 (6%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + + Q Y L ++D ++ Y++ + + + +L + S+SS+V+ A+KLG+ Sbjct: 1 MDLEVLVNQHYHELNENDLQIISYIMKHKNECQTMPIVELGQKTHTSKSSIVRLAKKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF K +L + + + ++ D AT + ++ Sbjct: 61 SGFSEFKYSLKNDSEQVQRNETQVNFSSMQSLDS----------------QATSKLFNQT 104 Query: 121 KLHECVTMLRSARRIILTGIG-ASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASS 178 +L + + A+RI G G V +F + + + +A + Sbjct: 105 ELTPILKEIHGAKRIFCYGTGWGQRDVLSDFRRNFVPLEKFFILLSAQRELQMAVASTIT 164 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 DDLL+ +S +G +E + + G +L+IT N L A+H LY A N Sbjct: 165 EDDLLIVLSLSGDIQEAKDEMNMLKLKGVPILSITNLRNNKLASMATHNLYFQATSIPLN 224 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPER 270 I + +TD LF A + ER Sbjct: 225 GEDIFSFLPLFQVTDSLFRAYFDYYQQNKDER 256 >UniRef50_A4EBN8 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBN8_9ACTN Length = 285 Score = 147 bits (371), Expect = 4e-34, Method: Composition-based stats. Identities = 58/267 (21%), Positives = 108/267 (40%), Gaps = 3/267 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +R ++D+ +A YLL + L+ +LA E S +++++F +KLG G Sbjct: 2 ILDSLR-NSASFNETDRAIATYLLNHTGDLKTLTMAKLAQETYTSNATIIRFCKKLGLSG 60 Query: 63 FPALKLALSEALASQPE-SPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + L + L + ++ + +V + D + + L + T K Sbjct: 61 YRELIMQLIQEISGDYLLAATVDHNRPFGSTDSIEAIEGNLANLLKGVIDQTKIELDSAK 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + SA RI + G S L F L+K+ + D V+ P D Sbjct: 121 LSIIAKAVLSAPRIYIFAKGESYLAGCIFRNNLLKLDRHVTMADDGGLQTLHVKNGRPGD 180 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN-SA 240 L L +SY+G+ + + A + G K IT F+ +AL ++ L E+ A Sbjct: 181 LFLFLSYSGIHYDYSKYAAALSERGIKPCLITAFSDSALARQCDTVLLIPKSERVIGKVA 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLELA 267 + S+ + +++ + QD + Sbjct: 241 NYSSMISLTYTLQVIYSLIFNQDYQEN 267 >UniRef50_C3RPM1 Predicted protein n=3 Tax=Bacteria RepID=C3RPM1_9MOLU Length = 278 Score = 147 bits (371), Expect = 4e-34, Method: Composition-based stats. Identities = 35/265 (13%), Positives = 88/265 (33%), Gaps = 2/265 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L I Y + +L + +S +LA+ S +++ +F + L Sbjct: 16 NLLTYINASYSQ--DMYYTICYQVLNNIEKIPDISINELADLCYTSPATISRFCKALKCD 73 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F K + L + + + + + ++ + + + Sbjct: 74 NFAEFKKEVQVGLKQASHEIKLHPDDLVEIHQNPVHCVDMVYDLTINSLIESKKHINIHE 133 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + ++ A+++ G + ++A + +KL+K+G + A D ++ D Sbjct: 134 IDRLCDIIYDAKKLHFFGFQFNKILASDIQFKLVKLGKFSYAFADRGDDSQRIELLDEDS 193 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + +S + + KV+ +T + + + A +E +S Sbjct: 194 VAIVLSVRARLSPVGDLIKSIKNREAKVILVTLNAESEVIELADKTFVVHGKESDFTESS 253 Query: 242 ISACHAQGMLTDLLFIALIQQDLEL 266 IS D+L++ Sbjct: 254 ISGTTVMKTFFDVLYVRYGLLYPRR 278 >UniRef50_A3YDZ1 Putative transcriptional regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3YDZ1_9GAMM Length = 295 Score = 147 bits (371), Expect = 5e-34, Method: Composition-based stats. Identities = 52/281 (18%), Positives = 105/281 (37%), Gaps = 10/281 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + RI+Q Y L+ + +KLA +L S+ +LA AGVS+S+V + Q+L YK Sbjct: 5 SIEQRIKQIYDQLSPTQQKLASCILNHQGDIATYSATELAKLAGVSKSAVTRLLQRLEYK 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F +K + A +Q + V I+ + + TL Sbjct: 65 DFGEVKRQVRAARRWGTPIAEKQPEHQ-----SISTVFNDYIQCDQNNIQRTLESIQTSD 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQASSPD 180 E V + A R+ + G + +A + +L + N + L V + + Sbjct: 120 FDEAVKSIGQAERVYVIGYRNNHALALHLRQQLTQCRDNVNLLPLPGQTLGEEVASFTNK 179 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D ++ + L + + G ++ IT ++ + + + Sbjct: 180 DTVIIMGIRRRPAWLKNLMITLRKRGIFLIYITDHADVNPKEVSDIHFSCVVR----GVS 235 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + + + +L + Q++ A +RI+ E + L Sbjct: 236 AFDSYASVMNIISVLANGVYQENYNEANDRIQAIEETYQTL 276 >UniRef50_C7MYE5 Transcriptional regulator n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MYE5_SACVD Length = 310 Score = 147 bits (371), Expect = 5e-34, Method: Composition-based stats. Identities = 55/280 (19%), Positives = 103/280 (36%), Gaps = 7/280 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 ++ R LA +++A LL P+ S + A AGV QSS+V+FA LG +G Sbjct: 25 LRAELQARMDSLAPGQQRIARLLLSDPEGTAFRSITETARLAGVHQSSLVRFASSLGLRG 84 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 +PAL E + V + + +++ + + T + E+ Sbjct: 85 YPALVKLCRE--RLTEQVHLVHRFESAQRHSASGDLLTSVVEHDQQNLARTFARVAPEEW 142 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASSPDD 181 V +L A R+ + G+ VAQ ++ L + + V + L+ ++ D Sbjct: 143 ARMVDLLAEAPRVYVMGLRKCLSVAQLMSYLLHMVRPDVRLVAPVSGGLVDELRDLRAGD 202 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + + IS + A + R G +A+T + L A L+ Sbjct: 203 VFVGISIRRYTADTVRAMELAKRRGAHAIALTDDAASPLAAIAELALFVETGGVTL---- 258 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + A L A+ + + + E L+ Sbjct: 259 LRSLSAFVSLVQAAATAVALRIGARSRSELLQDEELLDSF 298 >UniRef50_B1QUP4 Phosphosugar-binding transcriptional regulator, RpiR family n=2 Tax=Clostridium butyricum RepID=B1QUP4_CLOBU Length = 286 Score = 147 bits (370), Expect = 6e-34, Method: Composition-based stats. Identities = 53/281 (18%), Positives = 117/281 (41%), Gaps = 3/281 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN +I + L +++K L +++ + L + + N+ VS+S++ + +KL Sbjct: 1 MNIFFKIDELVD-LTENEKILVEFIKSKRFEFAELEVEDICNQCFVSKSTIYRLCKKLNL 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G LK+A+S + + I+ + V + L + + +T N+ + Sbjct: 60 IGLSQLKVAVSAGVKDYVQEQVDY-DFPIKSNQTQTEVLDSLKTIYRSTINSTYNLMDLQ 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L+ L+ A I + + A+NF +++ +IG N + + T S Sbjct: 119 ELNYIALQLKKANVIDIYTSAGNIFFAENFKFQMAEIGVNINVPEEEYIQHLTASTSDKS 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN-S 239 + + IS+ G R + + ++ +T N L++ A H LY + E N Sbjct: 179 HVAIVISFGGRGRCTSSIIGLLKEKKTPIILVTSTDDNPLKKYAKHILYMSSFENHFNKI 238 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +S S + + D+++ + D + + + ++K Sbjct: 239 SSFSTRLSLLYILDVIYGCYFKLDYDKNIKYKTDTYKRMRK 279 >UniRef50_C6QNE5 Transcriptional regulator, RpiR family n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QNE5_9BACI Length = 260 Score = 147 bits (370), Expect = 6e-34, Method: Composition-based stats. Identities = 49/267 (18%), Positives = 104/267 (38%), Gaps = 20/267 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I + Y L ++D + Y+L L LA + VS+SS+++ AQKLG+ Sbjct: 1 MKIEELINKHYNQLNETDFHILKYILNNKSECHKLGINSLAEKCNVSRSSILRLAQKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ ++ L S + + + TL + Sbjct: 61 SGYSEFRVFLKWQEQEGNNSDKSQA------------------EILSNDILETLKYIKTK 102 Query: 121 KLHECVTMLRSARRIILTGIGASGL-VAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E ++ A+RI + G G + L A + + ++ L ++ +P Sbjct: 103 DFSEMCKLIHRAQRIFIYGTGTAQLDCAFELQRMFLAVQKYLYVIQAQTELEMVIKDMTP 162 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DDL++ IS++G + A ++ G +++T N L + + LY + + Sbjct: 163 DDLVIIISFSGDTPAIFPAVQSLVAKGIPFISVTNLKNNRLARMTPYNLYANSSSNELSD 222 Query: 240 AS-ISACHAQGMLTDLLFIALIQQDLE 265 + ++ + +++++LF + + Sbjct: 223 GTKLNTFASFFIISEMLFSHYVDYLKQ 249 >UniRef50_Q2SAA1 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SAA1_HAHCH Length = 283 Score = 146 bits (369), Expect = 7e-34, Method: Composition-based stats. Identities = 50/270 (18%), Positives = 102/270 (37%), Gaps = 10/270 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 I +RY L++ K++A +++ P T + +A +A V+ S++++FA GY G Sbjct: 13 LQQAITERYNDLSKRLKQIAQFVMDHPSTVAMETVSVIAEQAEVTPSALIRFAAAFGYDG 72 Query: 63 FPALKLALSE-----ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 F ++ + + + + G + + + N ++ + Sbjct: 73 FSEMQQLFRQKLVENSTSYRERIRLSSAQPVHSGKVTSHTILNEFVNGNLLSLEHLPEMV 132 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQA 176 S E + + +L +A+ I + G+ S VA + L +I + L Sbjct: 133 SGESMDAAIKLLHNAKAIHVLGMRRSFSVASYLTYALRQIKRRVYLIDGSGGMLQEQAAF 192 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 D+L+AISY+ +E A + G +++IT + L +S E Sbjct: 193 LDKSDVLVAISYSPYAQETRAAVIKAYENGVPIISITDSRLSPLAPISSVYFDVKESE-- 250 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLEL 266 + + L L I + Q + Sbjct: 251 --VRGFRSLTSSLCLAQALVIGMAYQIEQQ 278 >UniRef50_Q1GCU6 Transcriptional regulator, RpiR family n=2 Tax=Ruegeria RepID=Q1GCU6_SILST Length = 285 Score = 146 bits (369), Expect = 7e-34, Method: Composition-based stats. Identities = 55/279 (19%), Positives = 104/279 (37%), Gaps = 6/279 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +++ R L +++++L+ +L S +LA A VS +V + QKLG+ G Sbjct: 4 IAEKLKSRESDLTRAERQLSAAILDNYPIPGLGSITELAELAEVSTPTVARMVQKLGFSG 63 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 +P + AL E + S V + + P + + + ATL + E+ Sbjct: 64 YPEFQHALREE-LREIISNPVEKRAEQAPELPEGHMLNRYAVAVYDNIRATLENVNLEEF 122 Query: 123 HECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 +L R+ + G SG +AQNF L I + + + +V P D Sbjct: 123 DTLCALLADTNSRVHIAGGRLSGTLAQNFYLHLQMIRRDVFMIPPRASWTHSVLDLLPGD 182 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L+ L A+ G KV+ T + +Q+ A+ + + Sbjct: 183 TLILFDIRRYENATLLLAEMAHERGVKVVLFTDQWRSPIQKEATFTFAARIAVPS----A 238 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + A +L + + + + + R EA + Sbjct: 239 WDSGVALLLLIESMIAKIQEDHWDTVKARNDELEAAFDR 277 >UniRef50_Q2J952 Transcriptional regulator, RpiR family n=3 Tax=Frankia RepID=Q2J952_FRASC Length = 319 Score = 146 bits (369), Expect = 7e-34, Method: Composition-based stats. Identities = 64/240 (26%), Positives = 106/240 (44%), Gaps = 3/240 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 IR GL S++++A+ L +P S+ QLA AG S ++VV+ Q LG++G Sbjct: 20 LFATIRAALPGLLPSEQRVAEVCLARPGDVVEWSAAQLAEAAGTSTATVVRACQHLGFRG 79 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F ++ L+ + + DP+ + + + TA + L +L Sbjct: 80 FQHFRVELARESGAAALRGEIGRT---DAADPVERLVDTVFGAATAVLADALGPLDRSRL 136 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V +L A R+++ G G S VAQ+ A + + +G A A D A T + +P D+ Sbjct: 137 APAVDLLDRADRLLVIGNGGSAPVAQDAALRFLGMGRPAEAPGDSIAQELTARLLAPSDV 196 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L I+ +G AA+ G V+ IT +T L + A L A + +S I Sbjct: 197 CLVITSSGANEPSLRAAEAARTAGAAVIGITSYTAGPLAEIADISLVVGAPDWPISSDMI 256 >UniRef50_D2EJX0 Transcriptional regulator n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EJX0_PEDAC Length = 253 Score = 146 bits (369), Expect = 7e-34, Method: Composition-based stats. Identities = 44/263 (16%), Positives = 96/263 (36%), Gaps = 20/263 (7%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 +R Q L Q + + Y+ + + ++ + L+ ++ VS ++V++F +K+GY+GF K Sbjct: 5 ERIQTLNQLEMFVYKYVAGHLEECKTMTIRDLSAKSHVSSTTVLRFLKKMGYEGFSDFKY 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 AL I + + +K+ + Sbjct: 65 ALRHHDKPDRFGQVEQEWGPIAQFLTQANLPK-----------------YRQKISAVAQL 107 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 A + G+G+S +AQ A L G + A+ D + L++ +S Sbjct: 108 FLKAHTRLFLGMGSSSSLAQYGARVLSNYGLFSLAIMDPYQPQPIEGRDYTKTLIMFLSV 167 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 +G + A+ + G +A+T + L + HCL E+ + ++ Sbjct: 168 SGESDAILRQANYYRQNGATTVAVTANHLSTLARVCDHCLAYDIPEKKVGTLDFTSQVPV 227 Query: 249 GMLTDLL---FIALIQQDLELAP 268 + + + L++ + Sbjct: 228 VYVLEQIGQRCGELMKNNKVTTK 250 >UniRef50_D0CNW7 Transcriptional regulator, RpiR family n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CNW7_9RHOB Length = 291 Score = 146 bits (369), Expect = 8e-34, Method: Composition-based stats. Identities = 59/276 (21%), Positives = 102/276 (36%), Gaps = 7/276 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RI+ L +S+++L LL A S +LA A VS +V++ A+KLG+ G Sbjct: 8 VKQRIQDELDDLTRSERQLGSILLQDYPMAGLQSITKLAAAAQVSTPTVIRMARKLGFDG 67 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 FPAL+ AL E +A+Q + P I DD + + M TL + Sbjct: 68 FPALQDALREEVAAQIKKPISKRDAWI-VDDETEHPITRFAQAVWTNMRHTLERLDKSMF 126 Query: 123 HECVTMLRSARRI-ILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASSPD 180 +L RR + G + A + I N + + + Sbjct: 127 DAVAQLLADTRRHLYVVGGRITRSNADYLFNHMQIIRPNVTMLGNSANVWPQYLLDMDDS 186 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +L+ L A G V+ T + + + A + + + E + Sbjct: 187 SVLVIFDIRRYEAHLEKLAQVASDRGVTVVLFTDQWGSPIGRAAHYTFHALVEAPS---- 242 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 S + A ++++ L + + E + ERI E Sbjct: 243 SWDSTIALQLISETLIAEVQEARWEESKERIEELER 278 >UniRef50_C7HVZ9 RpiR family phosphosugar-binding transcriptional regulator n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HVZ9_9FIRM Length = 272 Score = 146 bits (368), Expect = 9e-34, Method: Composition-based stats. Identities = 46/276 (16%), Positives = 104/276 (37%), Gaps = 18/276 (6%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I Y + +K +ADY + S + + N+ VS+SS+ +F+QK G+KG+ Sbjct: 10 IVDSYDKFTEVEKLIADYFIKNKHK-EDFSIKNIKNKLHVSESSITRFSQKCGFKGYREF 68 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 E S E+++ + ++ E++ Sbjct: 69 IYRYEEGFLKGISKSSFN--------------VEEVLNTYGRILNMFPSLIDNEQIDRIA 114 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 ++ ++ ++ GIG+SGLVA+ +L ++G A+ + + LL+ I Sbjct: 115 DLIIKSKSVLFVGIGSSGLVAREMQSRLTRLGILVMAIDYQDEMRMRAVFQKENSLLIGI 174 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S + + + A + G K + +T + + + E IS Sbjct: 175 SLSANKESVLFALKQAKENGAKTILVTSNSKDKFS-FVDEKVIIPTIEDLRGGNIISPQF 233 Query: 247 AQGMLTDLLFIALIQQD-LELAPERI-RHSEALVKK 280 + D + +I+ + + + + + + +++ Sbjct: 234 PVLVFMDFCYNKIIKNNLEDDYRKLLHKKTIDALEE 269 >UniRef50_A6FUC4 Transcriptional regulator, RpiR family protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FUC4_9RHOB Length = 284 Score = 146 bits (368), Expect = 9e-34, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 101/281 (35%), Gaps = 6/281 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M R+ + + S+++L + LL S LA+ A VS ++V + QK G+ Sbjct: 1 MTVSDRLLEHRDAMTPSERQLVNTLLDDYPIVGLSSITDLADAASVSTTTVTRMLQKTGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GFP + AL + S + + + + P + + ++ +L+ + E Sbjct: 61 EGFPQFQAALRSE-LKEMISDPIAKRSVWKHELPDEHILNRYSRQALDNQQRSLDDVNPE 119 Query: 121 KLHECVTMLRSARRI-ILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + +L + R + G + +A L I N V + A + Sbjct: 120 DFDQLCQLLSTPERTVYIAGGRITSALANYLYLHLQMIRPNVRLVSNSGAWPQDLLDVKQ 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+++ A +++ T + + + AS+ + Sbjct: 180 GDVVIVFDVRRYENTTLQMAQMCASKNAQIVLFTDQWRSPIHRIASNTF----SGRIVVP 235 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ +C ML + AL ++ ER EA+ + Sbjct: 236 SAWDSCLPLLMLIECTIAALQERMWTTVKERTDDLEAMFDQ 276 >UniRef50_B9Y9Y3 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y9Y3_9FIRM Length = 252 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 105/259 (40%), Gaps = 19/259 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ Y L S++ L Y+L P T + ++ ++LA++ GVS++ V+ +QKLG+ Sbjct: 1 MDFYS---NNYDLLTNSERSLLHYILDHPQTIQKMTCRKLADQCGVSKTVVINMSQKLGF 57 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +G+ L+ L + E + E T + T+ +N E Sbjct: 58 EGYNDLRFFLKN----------------RAKETGPAASVETVEAEITGNVTKTMQLNKPE 101 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + + +++ + + G S V L+ + + D + L + + + Sbjct: 102 NMRQAAQSIVNSQCVYVISRGTSKAVGNYLEHLLLTLNVKCINIPDYNLLNIIARQMTHE 161 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 ++L+AIS +G + A + G ++ +T F+ + L Q LY + T Sbjct: 162 EVLIAISLSGKTPIIVETAKIVKAYGNALITLTAFSNSPLVQYGDLALYCSSSTTDTKID 221 Query: 241 SISACHAQGMLTDLLFIAL 259 I + DLL + Sbjct: 222 DIVTRIGMFAVVDLLVHYV 240 >UniRef50_C3RP06 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RP06_9MOLU Length = 261 Score = 145 bits (367), Expect = 1e-33, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 102/267 (38%), Gaps = 14/267 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + + L+QS+ + Y+ PD +S Q+LA S +++++F +KL + Sbjct: 8 MLINQLDDEIIKNLSQSELYILHYVYDHPDEVIDMSIQELAKAVAFSSATILRFCKKLNF 67 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF K AL + + I D + + + + +T + E Sbjct: 68 SGFAEFKFALKQ-----QNKEIANLKKPISSMDSITSLYDDI--------ESTSLLIKER 114 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF-NAAAVRDMHALLATVQASSP 179 L E + ++ S +RI L G G S + L IG N + ++ Sbjct: 115 YLKEIIDLIDSNKRIHLYGEGISRIPVDYLEKLLFSIGRQNVYKYKSSRLAAHIASNANE 174 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD+L+AIS +G ++AI+ +T NA+ A+ + Sbjct: 175 DDILIAISTSGNYPTTVKIVKLFNLNHATIIAISPYTKNAIADLANINFRFFVNHRENID 234 Query: 240 ASISACHAQGMLTDLLFIALIQQDLEL 266 ++ A + D++F + + + Sbjct: 235 TEYTSRLAIFYIIDVIFKTYLVRKEKE 261 >UniRef50_C5EFX0 N-acetylmannosamine kinase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EFX0_9FIRM Length = 290 Score = 145 bits (367), Expect = 1e-33, Method: Composition-based stats. Identities = 60/261 (22%), Positives = 118/261 (45%), Gaps = 6/261 (2%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 R+ +Y L + KKLA+Y+L D S L+++ G++ S++ +F Q L Y GF Sbjct: 21 SRLSSQYSFLPKQQKKLANYILNHQDEVIRSSITMLSHKTGIAASTITRFCQSLSYSGFS 80 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 +K ++S+ + S I+ D + ++ +KL+K ++ +T+ ++L E Sbjct: 81 EMKFSMSK------KVLSNNDEALIQKGDSINVIAKKLLKSSSECFASTMRTIDLKQLEE 134 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 + +L SA I + G +S A LM G A D + +P+D+ + Sbjct: 135 VIHILMSAHNIHIYGQSSSYCSASYAQQMLMLSGLLGQAYNDTVNMNIVAHLLTPNDVAI 194 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 ++Y+G R +N A G K++ IT + + + A + LY E Sbjct: 195 GMAYSGESRNVNSALAIAKENGVKIVVITSAPYSTMAKLADYVLYYSHEIPDDIHYMFLP 254 Query: 245 CHAQGMLTDLLFIALIQQDLE 265 + ++ ++ +++ QD + Sbjct: 255 NLCEIIIWGIIQSSILLQDSK 275 >UniRef50_C1I4M4 Predicted protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I4M4_9CLOT Length = 264 Score = 145 bits (367), Expect = 1e-33, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 99/278 (35%), Gaps = 18/278 (6%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +LRI ++++A+Y L + S +L+ VS +S+ +F +K+G Sbjct: 5 IILRITHAKVKFTYVEEQIAEYFLSNREP---RSINELSKLLCVSPASITRFCKKIGLNN 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + L SE L S I + ++ +K+ Sbjct: 62 YKELMYLYSEHLKENNGIRSNKISSDLQ-------------NSYFKIFNNIDTNFDRDKI 108 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + + R + + +G S AQ+F ++ ++G + D A+ DDL Sbjct: 109 EKICEAIHNNRFMHIFALGLSATAAQDFKFRFSRMGKLVEVIYDKEAIEMASTLIKEDDL 168 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + + G + L A + G ++ ITG + + + + + T ++ I Sbjct: 169 VFIFTLRG-NKHLQKCAKLLREKGANIILITGNRNSKIVEYSDISVITDNLSGEESTGMI 227 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 SA + D L + + +E + K Sbjct: 228 SAQIPILIQID-LIHYYYVRKYSEVLDEWVSTEKVFNK 264 >UniRef50_A3TM76 Putative uncharacterized protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TM76_9MICO Length = 282 Score = 145 bits (367), Expect = 1e-33, Method: Composition-based stats. Identities = 58/278 (20%), Positives = 107/278 (38%), Gaps = 6/278 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M R+R+ L+ +K LA LL +A +S A VS ++VV+FA+ LGY Sbjct: 1 MTVADRVRRDMSSLSPREKLLARALLSDYPSAALGTSSDFGRAANVSAATVVRFARSLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF L+ L L+ + SP R + + +L + Sbjct: 61 GGFSELQAGLVAELSERAASPVSQYGESTDRRTGSRHWFDDAVAVTVGEAARSLEAIPKA 120 Query: 121 KLHECVTMLRS-ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASS 178 + V +L RR+ + G SG +A+ A+ L ++ + + D M+ + + Sbjct: 121 DIDAAVALLSDPKRRVCVLGGRYSGFIARYLAFHLQQVRPGVSTLDDAMNTGSSLAIDAR 180 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D+ + + AA + G ++ +T + + A+ L T + Sbjct: 181 RRDVAVIFDLRRYQSSTVEAAVALSAKGTTIICVTDEWLSPVADVATVTLTTSV----AS 236 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + A +L +LL ++Q + A R+ E Sbjct: 237 VGPFDSAAAAFVLAELLVDGVLQSLGQKALRRMEKWEQ 274 >UniRef50_C2CZ55 RpiR family transcriptional regulator n=3 Tax=Lactobacillus RepID=C2CZ55_LACBR Length = 263 Score = 145 bits (366), Expect = 1e-33, Method: Composition-based stats. Identities = 41/268 (15%), Positives = 97/268 (36%), Gaps = 10/268 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN I+ + L +++ L DY++ ++ S +++A VS ++ ++F +K+G+ Sbjct: 1 MNFFEIIKPYVEKLTKNEYTLLDYVIKHMAEIQNKSIREVAAACFVSTTTFLRFVRKIGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ + + + + + + + E + T+ V E Sbjct: 61 SGYSEFSTVIKYTVLNSDKKADSDVTFVEKQS--------QYRNEYLKNIEETVRVLDER 112 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 KL + + ++ G S + F ++ + + Sbjct: 113 KLLKICQQMDKHPKLYFYAKGFSKYTTDYIEYLYTLNDFIVIFPKNYEQRKLAYRNIDQN 172 Query: 181 DLLLAISYTGVRRELNLAADEMLRVG--GKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D++ Y G EL + +++ITG N +Q + LY +E N Sbjct: 173 DIIFVFDYEGEDDELIQLIQNLKSNTQFASLVSITGANNNTIQNMSDENLYLFTDELKIN 232 Query: 239 SASISACHAQGMLTDLLFIALIQQDLEL 266 S +++ + ++ +LL ++ Sbjct: 233 SVDMTSHVSLIVIMELLLYQYLEYKKNK 260 >UniRef50_C8NIR7 RpiR family phosphosugar-binding transcriptional regulator n=2 Tax=Lactobacillales RepID=C8NIR7_9LACT Length = 256 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 96/251 (38%), Gaps = 6/251 (2%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 GL ++K L Y+ + +S +L+ A VS +S+V+ +KLGY GF + K L + Sbjct: 6 GLTNTEKYLLAYIEEHIEEMPSISIVKLSERANVSTASIVRTMRKLGYDGFTSFKHDLKK 65 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 E+ S ++ + ++ +N + T+ + + V + A Sbjct: 66 QYRFANENLSTFKSLEV-----VDQKIRAVVVKNEQEVRRTIEQLDSRAIEDAVQAIFGA 120 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVR 192 +R+ L G S ++A K + D + + + D+ + IS G Sbjct: 121 QRVYLFSRGLSEMIASEMEIKFHLLERTCEQYVDPNIIKTISHRLNAQDVAIIISLNGHT 180 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY-TIAEEQATNSASISACHAQGML 251 EL AA + ++ +T + L + + +E + + ++ Sbjct: 181 EELVEAAKVCQQNEVPIVLVTANGASPLAKLSDITFVGYKSESSYFPDYEVRSRLPLQVI 240 Query: 252 TDLLFIALIQQ 262 + +L A + Sbjct: 241 SRILLDAYAIR 251 >UniRef50_A3JGM7 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=A3JGM7_9ALTE Length = 292 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 54/280 (19%), Positives = 103/280 (36%), Gaps = 5/280 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R+ ++ +++++A Y + S+ LA + G S ++VV+ A+ LG+ G Sbjct: 7 FEDRVNACLGQISPAEQRVARYFQDNREEVLIASASALAKQVGTSDATVVRAAKSLGFTG 66 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 L+ L+ L + + ++ + Sbjct: 67 MEELRRTLAIELRRDTSPAGRLARTLSEVSGDPLSALNVTLDIHQKSLDDLRQNITPSLF 126 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLAT-VQASSPDD 181 V + ARRI + GIG S +A+ F+ +L + G +A ++ LLA VQ D Sbjct: 127 QSSVRAIVDARRIFIFGIGPSSAIAEYFSIQLSRFGIDALSLTQTGLLLADGVQKFREGD 186 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 LL +Y V EL + ++ + K + + L+ R L S Sbjct: 187 LLAVFAYGRVYPELTVLLNQAEQCSMKKMLFSDTLGPTLRNRVDLVLPVARG----RSDM 242 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +S A L + L + + + + + L +L Sbjct: 243 LSMHTATLALIEGLLVGVATERPKETIANLESLNKLRTEL 282 >UniRef50_A6WWJ9 Transcriptional regulator, RpiR family n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6WWJ9_OCHA4 Length = 297 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 41/284 (14%), Positives = 92/284 (32%), Gaps = 11/284 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN I L + +K+AD++L P + ++LA S +++ +F + LG Sbjct: 1 MNLSTLIGSCRGSLTSNQQKIADFVLANPFAVATMGIEELAQATSTSSATITRFVRALGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F + + + P + E + ++ ++ Sbjct: 61 GSFTDFRGLAVQGY---QSLLRPVENVDRARHIPPGKIAEDSFQSAAESLRQVMSEAGNT 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQ---AS 177 + A R+ G G S + Q A K + + + L Q Sbjct: 118 AWEGVAAQMMHAPRVAFLGFGVSANMLQYLADKSILSTQSQIMLNGAGGLERVAQKVLRL 177 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 P DL++A++ + G +A+T + L + ++ A Sbjct: 178 GPGDLVIAMALPRYSQATVDFLKLARGRGAYCIAVTDGPASPLCPHSHEQIFVPASHPVL 237 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + S+ + + A++ + + + + +L+ L Sbjct: 238 H----SSTIGALAAFEAII-AVLTAHHQSVSDAVSVTRSLMPYL 276 >UniRef50_B9QTZ2 SIS domain protein n=2 Tax=Labrenzia RepID=B9QTZ2_9RHOB Length = 287 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 57/283 (20%), Positives = 102/283 (36%), Gaps = 10/283 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 I Y L+++ + ADYL S + +A +GVS +S + A+ +G+ Sbjct: 8 IRAAITANYADLSETLRTAADYLADNQLEIATRSLRAIAAASGVSPASYTRLARAIGFSD 67 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + AL+ L+ + S D + + + A ++ +L Sbjct: 68 YEALREQARMELSQRGSSFQDKARQLRNEADQP--LLPRQAAACVDNIKALVDDIDPVRL 125 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSPDD 181 + V L ARR ++ G AS A FA+ + A L + + + DD Sbjct: 126 EQVVDCLSKARRTVVVGALASAGFADYFAYLANWFNDSWIVAGRNGASLGGALASLTKDD 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++ +S AA+ G KV+ +T Q A H E Sbjct: 186 CIVIVSKHPYAHRSVRAAELAAENGAKVIVLTDSHAFPGLQFADHHFIQRTESPHF---- 241 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIR---HSEALVKKL 281 S+ A +L + + L+ + A RI+ L+ +L Sbjct: 242 FSSYAATLVLIETITGMLVARAGSEAEARIQNVDRHNRLLDEL 284 >UniRef50_B4BR41 Transcriptional regulator, RpiR family n=3 Tax=Bacillales RepID=B4BR41_9BACI Length = 248 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 54/263 (20%), Positives = 110/263 (41%), Gaps = 18/263 (6%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L R L ++K + Y+ + A+ LS +A + VS +++++ KLG + Sbjct: 3 KLLDRFSNYIGQLTHAEKHVLYYIDGHVEQAKQLSLTAMAEKNNVSTTTIIRMCHKLGLE 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF L+ L DD VGE I+ A M TL+ + Sbjct: 63 GFSELRYILK------------------TIDDQAIPVGENTIERYKADMNQTLDSLERKH 104 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + E ++ A R+++ +G S ++ + F+ L+++ ++ V + H + P D Sbjct: 105 VEEISQLIFEANRVLVVAVGLSKMIGEYFSKLLIQVNKPSSYVYESHIIDLLPNMVQPKD 164 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++ IS +G + + AA+++ + +AIT + L + + + Sbjct: 165 MVIFISSSGETKTIVQAAEKLRFKNIETVAITNSADSTLAKLVRKHISAYVQRVQFAGYD 224 Query: 242 ISACHAQGMLTDLLFIALIQQDL 264 +SA +L D+LF ++ Sbjct: 225 LSARSTLVVLIDILFEFFMKNYK 247 >UniRef50_B8DD46 Phosphosugar-binding transcriptional regulator, RpiR family n=17 Tax=Listeria RepID=B8DD46_LISMH Length = 245 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 100/248 (40%), Gaps = 18/248 (7%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 + + +++ L Y++ D + ++L+ VS +S+V+F +KLG +GF K+ Sbjct: 5 EVIRQFTETEHHLYRYIMDNRDKVMFMRVRELSEVTHVSPASIVRFTRKLGCEGFSEFKV 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L + + + + V E+ + T+N + + L + Sbjct: 65 KLKQEATREVKKKTA----------DTVEVLEEFFE-------RTMNRDYDHVLDAAAEI 107 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + A ++ GIG SG++A+ + + ++D + +++ +S Sbjct: 108 INEADLVVFFGIGTSGILAEYGSRFFSNMKKRTFYIKDP-FYPNPGEQFKNKAVMIILSV 166 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 +G ++ A M + G ++++IT + N L + + ++ + +I+ Sbjct: 167 SGETDQVLEQAQNMQQYGSRIISITNTSHNTLAGLSDVNIPYYVTQEMVDKTNITTQIPV 226 Query: 249 GMLTDLLF 256 L + + Sbjct: 227 LFLLEAMA 234 >UniRef50_C0CX07 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CX07_9CLOT Length = 293 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 106/261 (40%), Gaps = 15/261 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN R+ + L ++D + Y+ LS Q++A + ++ ++V++ ++KL Y Sbjct: 43 MNFEERVLRHEDQLNETDDDIVAYIRSHRQEIMKLSIQKIAADLFIAPNAVMRLSKKLEY 102 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK ++ + + + +++ + + + TL+ Sbjct: 103 SGFSELKFSVQNEG---------------EPEGTGKTISGRILGQLPSNIVKTLDTIDVL 147 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + M++ AR I G+G S + L + + + +H + V+ D Sbjct: 148 TLKKTAAMMKKARCCIFAGVGDSTYFCEMLGKNLRCLDCSVQFYQQIHDMFYAVRHGCRD 207 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L+ IS G L A E +G V++IT F N L + LY E++ Sbjct: 208 DMLIIISARGENDRLIEMAGEAKAMGMPVVSITHFYENRLAKACDVNLYFWGEDREVQGY 267 Query: 241 SISACHAQGMLTDLLFIALIQ 261 +++ +L LL Q Sbjct: 268 NVTDRSGLMVLVRLLSEEFWQ 288 >UniRef50_C0D8Y2 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D8Y2_9CLOT Length = 278 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 112/279 (40%), Gaps = 11/279 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M ++++ L+ KK+A Y+L + +L+ +++ EA VS+++V++FA +G+ Sbjct: 1 MQFEALVKEKIAELSAGQKKVAQYILGHLEETSYLTLTKISREANVSETTVIRFAYSIGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + F A++ AL + + + ++ D ++ + + T S + Sbjct: 61 ESFSAMQGALQQEILGNNSVKAEGNAHESAYYD-------HVLNREISILEKTKKGLSRD 113 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSP 179 K+ E V L A + G A F L + V + + V + Sbjct: 114 KVDEAVERLYRADMVFSVGSRTGFPAALWFGIALGRFRDGVFPVNPVGEDFFSNVMKVTE 173 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +++AIS + + G ++ +T + A T + T Sbjct: 174 HSVVVAISMARYSKATYRFIQQAKARGASIILVTDSQISPPALLADLVFLTESNRDETGI 233 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 +IS+ A L +++ + L ++D A ER++ E L Sbjct: 234 NTISSISA---LLNIMAVGLRRRDPRQAMERLKVLETLY 269 >UniRef50_C3WYI9 Transcription regulator n=6 Tax=Fusobacterium RepID=C3WYI9_9FUSO Length = 282 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 48/284 (16%), Positives = 124/284 (43%), Gaps = 9/284 (3%) Query: 1 MNGLLRI-RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 MN + ++ ++ Y L +++K++A+++ P LS+ +L E GVS +SV++F++ +G Sbjct: 1 MNEIHKLYKKNYAKLTKTEKRIAEFISKNPKKLITLSALELGKELGVSDASVLRFSKNIG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 + F K ++ L+ + + + + K+I + + L Sbjct: 61 FNKFSDFKNYVALELSEGNLNERIVKN--WNNFTSENDLANKIINADLRNIQDFLLNIDF 118 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASS 178 E + + ++ +++I + GIGAS +AQ W + ++G+++ + + L T+ Sbjct: 119 ELIERLIDLIEKSKKIYILGIGASRAIAQFMFWHIKRLGYSSECIIEGGFGLYETISKIK 178 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 ++LL+ ++ + + K + IT + + + N Sbjct: 179 KEELLILFAFPKFLNDEINTLKVIKEKKAKSVVITSSLFSEISFLGDIVFRVPIQ----N 234 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 +A +++ +++ +L +++ + E + +KK + Sbjct: 235 NAFLNSYMVPMEFCNIVLTSLFEKNKDKIYEEWKK-NNNIKKFL 277 >UniRef50_B9R3N6 SIS domain protein n=3 Tax=Alphaproteobacteria RepID=B9R3N6_9RHOB Length = 302 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 46/276 (16%), Positives = 99/276 (35%), Gaps = 7/276 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L + + L +K A Y+L P+ S +++A+ AGV ++ V+ A+ +G++G Sbjct: 14 VLDDLAAELEVLTPELRKAASYVLENPNDVGVSSIREIADAAGVKPNTFVRMARSVGFEG 73 Query: 63 FPALKLALSEALASQPESPSVPIH--NQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + + EA+ S+ + L + ++ + + T Sbjct: 74 YEDFRQPFREAIRSRGTDFPDRARWLQSLSKGGQLGELFAEMAACAISNIENTFAATDAN 133 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKL-MKIGFNAAAVRDMHALLATVQASSP 179 + + +AR + G+G + A+NF + M + R + + Sbjct: 134 AMKAAADAIVNARHTYVLGVGVNNSNARNFTYLADMAVDTIWTIPRMGSVATDDLARADK 193 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+LLA++ R ++ A + G ++AI+ + + + H AE Sbjct: 194 RDVLLAMTCKPYRTDVIEAVEVAREQGLTIVAISDSPASPIVVGSDHAFIIDAETPQF-- 251 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 + + L + L +I I Sbjct: 252 --FPSSVSTIALLETLLAFVIADAPPDVVANIEKFH 285 >UniRef50_B6G7X7 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G7X7_9ACTN Length = 303 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 60/276 (21%), Positives = 106/276 (38%), Gaps = 3/276 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ R+ +R S+ ++A + + L+ ++LA A VS SV +F +KLG Sbjct: 1 MDIKRRM-ERASDFTPSELQIARTVSALGPRLQSLTLKELALAAHVSIPSVHRFCKKLGL 59 Query: 61 KGFPALKLALSE-ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 +GF LK+ +++ E V I+ DD V ++ + T ++ Sbjct: 60 EGFKELKVEMAKSDARHTGERGEVDINFPFAADDTADGVLAQMASVYETTLSDTRDLLDP 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L +L +A I + + AQ F +L+ IG +A + T AS Sbjct: 120 DSLAHAAELLDNALSIDIYTQSHNLYPAQMFCDRLLSIGRHATCFESIERQSRTALASDR 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA-TN 238 L ISY+G+ L+ + + + L S L+ E Sbjct: 180 THAALLISYSGLGPNLSTLLPILQERDVPTIFVGTPRGGQLNPGLSIYLHVSDRESLQNR 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 ++ A + D LF L +D E + + S Sbjct: 240 ITQFASHIAVQYVLDSLFGCLFARDYEQSRAFLERS 275 >UniRef50_A1B8L9 Transcriptional regulator, RpiR family n=3 Tax=Alphaproteobacteria RepID=A1B8L9_PARDP Length = 305 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 111/277 (40%), Gaps = 8/277 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RI ++ + ++ A ++L PD +S ++LA AGV S++ + A+ LG+ G Sbjct: 22 LRDRIIGTFESMPPQLQQAARHILEHPDEVALVSMRELARNAGVQPSTMTRLAKFLGFAG 81 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + ++ ++A+ + + + D+ + ++++ + + S +L Sbjct: 82 YEDIRAHHAQAIRLRVDGFAAQQERASTSDEG---LAQQMLHSLSLQIARLGEPASIARL 138 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASSPDD 181 L ARRI + G+ + LVA +F + + +G + + + + D Sbjct: 139 EAAAERLARARRIYVLGLRSCHLVAWHFHYVMTLLGERTEHLDGPAGTVGDGLMRAGAKD 198 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +LLAIS R A G V+AIT + L A + E Sbjct: 199 VLLAISINPYARHSLELAQLAREKGMGVVAITDSEVSPLNGVADEVILCATESPTF---- 254 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 ++++L L +D A E ++ ++ + Sbjct: 255 FHTLAPALAVSEVLCGLLANRDRAAALEALQKADRHL 291 >UniRef50_A6UBD6 Transcriptional regulator, RpiR family n=16 Tax=Proteobacteria RepID=A6UBD6_SINMW Length = 292 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 98/281 (34%), Gaps = 7/281 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I + L +++++LA+ LL + S +A AGVS +V + QKLG+ Sbjct: 8 MTVSDVINAHFAALTRAERQLAETLLDNYPVSGLGSITTVAENAGVSTPTVARMVQKLGF 67 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GFP + L + L + +P + M TL+ Sbjct: 68 RGFPDFQARLHQELEATISNPIAKHDRWAASAPGTHT-LNRFADAVMGNMRQTLSQIEPA 126 Query: 121 KLHECVTMLRS-ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASS 178 + ++ R++ L G + +A L I + + + V Sbjct: 127 EFDTAAALVADLKRKVYLVGGRITRSLADYLFTHLQVIRTGVTQIAANPSSWPHYVLDMR 186 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D+L+ +E+ A G +++ T + + + +S E + Sbjct: 187 QGDVLILFDIRRYEQEMETLARFARDRGVEIVLFTDQWGSPVAKSSSKVFRARIEVPS-- 244 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + + L + L A+ + + +R++ E L Sbjct: 245 --AWDSSVMLLFLVEALIEAVQSSNWDQTRDRMKTLEGLFD 283 >UniRef50_A9D8B4 Putative uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D8B4_9RHIZ Length = 281 Score = 144 bits (364), Expect = 3e-33, Method: Composition-based stats. Identities = 45/279 (16%), Positives = 94/279 (33%), Gaps = 8/279 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M +++ L ++KK+A L + + +LA AG S +V++F +LG+ Sbjct: 1 MAIREQVQAELGNLPGAEKKIAHAFLANYPSIGLSTIAELAALAGASAPTVLRFVARLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + +P + L + +Q SP + D + + ATL E Sbjct: 61 ESYPDFQRRLRADVQAQLMSPLERARSSGPTTDNPA--LKASFANIAGNLEATLKAVPES 118 Query: 121 KLHECVTMLRSARR-IILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASS 178 + +L +R G + VA A L I + Sbjct: 119 EFETACELLSDSRSACCFVGGRFTDAVAGYMAAHLRIIRPGVRHFGGQTSTWRDQLLDIR 178 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P D+ + + +L + + +++ IT + + + A L + + T Sbjct: 179 PGDVAVLFDIRRYQSDLVRLGELLAERKARIILITDPWLSPIARSARVVLPCVVDADRTW 238 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + L + + + + A R++ E + Sbjct: 239 D----SSVTLLALAEAMIDRVSRAQAATAGTRMQTLEDI 273 >UniRef50_C7H192 RpiR familytranscriptional regulator with phosphosugar-binding domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H192_9FIRM Length = 266 Score = 144 bits (363), Expect = 3e-33, Method: Composition-based stats. Identities = 60/248 (24%), Positives = 108/248 (43%), Gaps = 4/248 (1%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L +++++AD +L A +S +LA + S+++V + KLGY + +L L+ Sbjct: 17 QLYSAERRIADCILADVKWASVATSAELAKASHSSEATVTRLCHKLGYANYRKFQLELAR 76 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 + Q E+ + +DPL L + AT+ + +L + +++LR+A Sbjct: 77 DVLEQQETEARK----RPPNDPLHQALLDLQNNRQEEVQATIQALNLVQLRKVLSILRAA 132 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVR 192 I + G+S VA + + KL +G + A +P D LL IS G Sbjct: 133 EIIEIEANGSSLPVAMDASLKLGSLGKRCMISPVPEKARSFASALTPKDALLLISSAGRC 192 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLT 252 L AA + G V+ IT +AL AS+ L Q S + + + ++ Sbjct: 193 EALETAARAAKKNGTPVILITCDKRSALAGHASYTLLASNRIQRIASDMMPSQLSAALVV 252 Query: 253 DLLFIALI 260 + L+ L+ Sbjct: 253 EALYYLLV 260 >UniRef50_C5RND9 Transcriptional regulator, RpiR family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RND9_CLOCL Length = 252 Score = 144 bits (363), Expect = 4e-33, Method: Composition-based stats. Identities = 35/262 (13%), Positives = 94/262 (35%), Gaps = 22/262 (8%) Query: 10 RYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLA 69 L + +L Y+ + ++ ++LA E VS +++++F + +G +G+ K Sbjct: 6 NVNNLNDLELQLYRYISENMEKVVYMRIRELAQETHVSTTTIIRFCKAMGCEGYSDFKTM 65 Query: 70 LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTML 129 L + + L E+++ + + +++ ++ Sbjct: 66 LKLY----LKEYKRNDSKLMLSTGILEDFLERVVNGDLD-----------DAMNKAAKLI 110 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYT 189 ++ GIG SG + A L +G A + D + + + +AIS + Sbjct: 111 HEQENVLFIGIGNSGHSSGYGARYLSSLGKFALYIDDPYYP--LTGDIIKNSVTIAISVS 168 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN-----SASISA 244 G + + G K++++T + L + A + ++++ I++ Sbjct: 169 GESDSILRLTNIFKERGSKIISVTNRKSSPLSKMADVNISYYIQQESFADNGLEYRDITS 228 Query: 245 CHAQGMLTDLLFIALIQQDLEL 266 + + + + + Sbjct: 229 QVPSIFIVETIAKKVHELMNNR 250 >UniRef50_B0NHF5 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0NHF5_EUBSP Length = 280 Score = 144 bits (363), Expect = 4e-33, Method: Composition-based stats. Identities = 52/276 (18%), Positives = 107/276 (38%), Gaps = 10/276 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L RIR Y L + K +ADYL+ P+ +++ QL+ + S+ ++++F +K+G Sbjct: 1 MDILQRIRDMYPALTKKQKGIADYLMENPEDVCYITLAQLSQQTASSELTLLRFCEKIGC 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRG----DDPLRLVGEKLIKENTAAMYATLNV 116 F LK E S P + + + ++ AA+ Sbjct: 61 SSFLELKNEFREYTQHMIRLLSAPAYFPPENASCERSAKEALLTDICRQEAAAVADFSAS 120 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAV--RDMHALLATV 174 + E + ++ +RRI + S ++ A +L + FNA + D+ + Sbjct: 121 FNPESIVAAAGKIKKSRRIFIFAHDISKILGDFLAARLRLLYFNATLIDLDDLAETQNRL 180 Query: 175 QASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE 234 Q DL++ S+ + A + G +L IT + + ++H L Sbjct: 181 QQLCEGDLVIFFSFPKYYYPMGSIARKAADTGVPILTITDSISSPAAEHSTHLLLCQTST 240 Query: 235 QATNSASISACHAQGMLTDLLFIALIQQDLELAPER 270 + ++ + +LL L+ + + + Sbjct: 241 KMF----YNSLTLPMTILNLLASCLVIDMVPESERK 272 >UniRef50_Q46SK2 Transcriptional regulator, RpiR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46SK2_RALEJ Length = 313 Score = 143 bits (362), Expect = 4e-33, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 101/280 (36%), Gaps = 8/280 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + +I L +S+++LA L S+ +LA +AGVS+++ +F ++LGY+ Sbjct: 35 SLQDKILALNDQLTESERRLAAVTLECIGNLAAYSATELAQKAGVSKATAGRFFRRLGYE 94 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F ++ + + + + + + + + T + + Sbjct: 95 NFNEVRALVRDEADRGSPLYELAGVQAPTENQTP---LARHLANDLQNLAQTFDRLNPAD 151 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSPD 180 + V + +R+ + G ++AQ L ++ V L + Sbjct: 152 VERAVALFADTKRVFIAGFRNGRVLAQYAWALLTQLRPGVTLVPGAGLNLAEDLADLGAG 211 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+LL + + L RVG KV+ +T + L R+ L +A Sbjct: 212 DVLLVMDFRRRVTLLWPMVAHANRVGAKVVILTDPSATDLPARSDVVLRC----VNHGAA 267 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + A L + L L + A ER+ E+L Sbjct: 268 VFDSYVAAVSLINHLCTNLALVLGDTARERLEEIESLHDH 307 >UniRef50_C3RJI4 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RJI4_9MOLU Length = 252 Score = 143 bits (361), Expect = 5e-33, Method: Composition-based stats. Identities = 45/265 (16%), Positives = 97/265 (36%), Gaps = 20/265 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + Q Y L ++D + Y+L +S +L+ +S++++ +F+QK+ + Sbjct: 1 MQLEELVNQYYDDLNENDLMIWKYILAHKKECCEISIDELSKRCNISRATISRFSQKISF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GF K+ L + +++ +M T + Sbjct: 61 EGFREFKMRLKLECQQVQVKNDG--------------MLDEICNNYLKSMELTKDS---- 102 Query: 121 KLHECVTMLRSARRIILTGIGASGL-VAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 L + + ARR+ + G G + VA+ ++ + L T+ Sbjct: 103 DLDDLFEHIHHARRLFVFGTGETQNTVAEMIKRVFLQTKVFFVTLYGKSELKMTINGLGE 162 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+++ IS +G A + G +++IT N L + A LY I ++ + Sbjct: 163 QDVMIFISVSGENEMAIEAMKTLKNKGTYIVSITKLNNNTLARLADKSLYVITDQYKRFN 222 Query: 240 ASISACHAQGM-LTDLLFIALIQQD 263 + ++LF+ + Sbjct: 223 NRTYETTSAYFNTVEILFLKYLDYL 247 >UniRef50_Q03HS5 Transcriptional regulator n=2 Tax=Pediococcus RepID=Q03HS5_PEDPA Length = 248 Score = 143 bits (361), Expect = 5e-33, Method: Composition-based stats. Identities = 41/255 (16%), Positives = 106/255 (41%), Gaps = 11/255 (4%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 L+ +++ + ++ + LS +L+ A VS +++++ +K G+ GF K ++ Sbjct: 4 DNLSSTEQFVWKFIQDNLELVPFLSIVELSERANVSTATIIRALRKKGFTGFSDFKHGVA 63 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 + +S+ + + + I +N + T+ + + + + V ++ Sbjct: 64 KNNSSKDFTNLERADSD----------IKSAILKNEHEVTNTIKMINIPDIEQSVQRIKH 113 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGV 191 A+ I + G S L+A+ KL + N D + + P +L++ IS G Sbjct: 114 AKTIYIFARGFSELIAKELLVKLQLLNKNCQLSDDPNIIRTLSADIRPGNLVIIISLNGE 173 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY-TIAEEQATNSASISACHAQGM 250 EL AA + + ++ IT + + + ++ L +E + + + + Sbjct: 174 TPELIEAAKKTSKNKIPIILITTNADSTIGKYSTIELCGFKSETTYFPAFEVHSRLPLQV 233 Query: 251 LTDLLFIALIQQDLE 265 ++ +L + + + + Sbjct: 234 ISRVLLDSYVIRTQK 248 >UniRef50_B7QPC3 Transcriptional regulator, RpiR family n=4 Tax=Rhodobacteraceae RepID=B7QPC3_9RHOB Length = 290 Score = 143 bits (361), Expect = 6e-33, Method: Composition-based stats. Identities = 57/279 (20%), Positives = 99/279 (35%), Gaps = 7/279 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 IR +Y L QS+KK A+ LL A S +A+ A VS +V + QKLG+KG Sbjct: 8 VRELIRDQYSALTQSEKKFANALLANYPAAGLASITIVASNAEVSTPTVARMVQKLGFKG 67 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 +P AL + L ++ P+ N + P + + + T + T + E+ Sbjct: 68 YPQFHQALLKELEAKGSGPTQRRANWAS-EAPEGHLLNRFAQAVTENLSQTFSNVDSEQF 126 Query: 123 HECVTMLRSA-RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQASSPD 180 V L + R+ + G + +A I + V Sbjct: 127 DAAVRQLANTEGRLYVVGGRITRALADYAFTHFQAIRQRVTHMTSSSATWPHYVLDMVEG 186 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D LL L A+ G V+ IT + + A+H E + Sbjct: 187 DTLLMFDVRRYETNLQRLAELAAERGVSVILITDQWSSPINSVAAHTFNCWVEIPS---- 242 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + + + ML + + A ++ + R + + Sbjct: 243 AWDSNISTMMLLEAMISAAQEERWDETRARYEKLDTIFD 281 >UniRef50_C9M9F8 Transcriptional regulator, RpiR family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M9F8_9BACT Length = 289 Score = 143 bits (361), Expect = 6e-33, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 105/278 (37%), Gaps = 8/278 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +R R + +++ ++LL A L+ +A E VS++ +V+ A+ LG+ G Sbjct: 6 LQEVLRARLENSPPKARRVVEFLLSHMREAAFLTIGDVAGELNVSKAQLVRVARMLGFGG 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + LK A+ E + Q ++ + + ++ + A + T N + Sbjct: 66 YSELKAAIQETVLEQVNPAAMLNRAL---SENESALAARIHQMEHANLEDTWNRLDPANI 122 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASSPDD 181 + ML +A I G G S + ++ +L ++G + + L+ V+ D Sbjct: 123 KKFSAMLLAADSIFCAGWGISAMTSECLFSRLRELGLKSFTLQPGCLTLIEQVRCLDSRD 182 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L+A L + + G K++ +T + + A + Sbjct: 183 VLIAFDLPSYALLLTESVARAKQAGAKIITVTDSPAAPICKMADLSFFVSDSSPTFG--- 239 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S+ L +L AL + + A + + A + Sbjct: 240 -SSLIGAVFLIHVLTSALSVEMGDRARKALEEQAACLH 276 >UniRef50_A6M2I1 Transcriptional regulator, RpiR family n=3 Tax=Clostridiales RepID=A6M2I1_CLOB8 Length = 263 Score = 143 bits (360), Expect = 7e-33, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 109/272 (40%), Gaps = 22/272 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I + ++ L ++D + +Y+ L+ QLA++ VS++++++F+QKL Sbjct: 1 MKLDELINKYHKHLNENDLYIWNYISKHRKECETLAIDQLAHKCNVSRTTILRFSQKLSL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG+ LK+ L E+ + ++ A + E+ Sbjct: 61 KGYGELKVYLKLDNEKSKENVNN-------------------VEAVCDAYNEVIKNIKEK 101 Query: 121 KLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + ++ +R + + GIG + + F + G + A V ++ Sbjct: 102 DCTDIFELIDKSRTLYVYGIGMVQSSIKKEFKRTFLTAGKIFYDLSGYTEANAIVDLATD 161 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA--EEQAT 237 +D+ + IS +G + + A + +++IT N+L + + + LYT Sbjct: 162 EDVFVIISVSGENQFIMDFAKNLKIKNIPIISITKLKDNSLAKLSDYNLYTSTALIPSIY 221 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPE 269 N + + +L ++LF+ ++ + + Sbjct: 222 NDIDFESLTSYFILIEILFLKYMEYKTQKNKK 253 >UniRef50_B6R4H6 Transcriptional regulator, RpiR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R4H6_9RHOB Length = 283 Score = 143 bits (360), Expect = 7e-33, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 101/265 (38%), Gaps = 6/265 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + RI + + + + A Y L PD ++ ++A+ AGV S++V+FAQ LG+ Sbjct: 18 SLKARISTLSESMPKRLLQCARYALANPDRIALGTTAEIASAAGVQPSTLVRFAQTLGFD 77 Query: 62 GFPALKLALSEALASQPESPSVPIHN-QIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF ++ L + + + + G + + ++ + ++ L Sbjct: 78 GFSQMQQIFQGQLVGRSSEYTERLTKIRESGTNTPGSILGNFVERSKQSLDDLLRQVDTV 137 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASSP 179 L + L +A I L G+ + V + L K+G + L VQ + Sbjct: 138 ALERTIEALSAAENIHLLGLRRAYPVVSYLHYTLGKMGVRTNLLEYTGGILEERVQFINE 197 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +D L +++ E+ A + G V+++T + + + +S L E Sbjct: 198 NDALFVATFSPYSPEVVEFASKAFGRGVAVVSLTDSVLSPIARVSSTVLEVNEAEH---- 253 Query: 240 ASISACHAQGMLTDLLFIALIQQDL 264 + + L + +A+ Sbjct: 254 GAFRSLSTTMCLATSIAVAVGDARK 278 >UniRef50_A8RA11 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RA11_9FIRM Length = 248 Score = 143 bits (360), Expect = 8e-33, Method: Composition-based stats. Identities = 52/260 (20%), Positives = 114/260 (43%), Gaps = 14/260 (5%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + + Y+ L++++K + +L + ++S +A + SQS+V + QK GY+G Sbjct: 2 FIQIDKTIYEKLSEAEKGVIQFLNQNEEKIPYMSITNIAEKTFTSQSTVSRTIQKCGYQG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 L+ A+S+ + S ++ ++ T++ S + Sbjct: 62 ISQLRFAISQQEQMKNHHESSYG-------------VNNILSKSYRESTKTIDNISPVAM 108 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + +++A+RI + G + L+A+ F L +G+NA V+D+ + T + + +D+ Sbjct: 109 LQTIEFMKTAKRIFIFSRGFTALIAEEFQMYLQLLGYNAIIVKDVKWMENTERIVNTNDV 168 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + +S EL +A R G KV++ +P L+ + +Y +E+ S Sbjct: 169 VFILSVRNTTPELATSARAAKRKGAKVISCCCKSPCELENFSDIIIYGHSEQIMKASGMT 228 Query: 243 -SACHAQGMLTDLLFIALIQ 261 + ++T + L Q Sbjct: 229 VYSRIPLLIITRTIIEYLGQ 248 >UniRef50_Q09KH2 FitR n=27 Tax=Proteobacteria RepID=Q09KH2_ECOLX Length = 295 Score = 143 bits (360), Expect = 8e-33, Method: Composition-based stats. Identities = 50/273 (18%), Positives = 102/273 (37%), Gaps = 4/273 (1%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 R R R L + +A Y+ + ++ ++A S ++V++ Q LG+ G Sbjct: 14 ERFRTRASQLTPGLRVVASYINEHREVVLEQTAMEIAATLNTSDATVIRAIQALGFAGLR 73 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 LK L + L S + + +++ + + L + Sbjct: 74 DLKRTLEQWLGPALSSSEKMSTTVSNLTSDVNTAIDFVLEGHLYTCNVLSEPENRHALAQ 133 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSPDDLL 183 V +L AR++ + GIGASG++A A +IG A A+ L + A D+L Sbjct: 134 AVALLVQARQVAIFGIGASGILADYTARLFNRIGLPATALNRTGIGLAEQLIALQRGDVL 193 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + ++ RE E R+G V+ +T + + AS ++ + Sbjct: 194 IMMAQKSAHREGLTTLREARRLGIPVILLTNALDSRFSKDASIVIHVP-RGDEKGKTPLH 252 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + +++ ++ + A + I+ Sbjct: 253 GTV--LLCLEMIVWSVASAVPQRAVKTIKRIND 283 >UniRef50_D2EIN0 Putative uncharacterized protein n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EIN0_PEDAC Length = 271 Score = 143 bits (360), Expect = 8e-33, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 96/280 (34%), Gaps = 18/280 (6%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N +L I + + D+ +A+Y + + LA + VS SS+ +F+ K+G Sbjct: 7 NLILMIESKREQFTDVDQIIANYFVAHQE---VRDINGLAKKLAVSPSSITRFSHKIGLS 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + L E L S S + ++ A T + E+ Sbjct: 64 NYKELVFLYKEYLGSLNRKVSR--------------ISSDVVDSYRAIAQRTSDRYDEQT 109 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + R I G+G + V +F ++ + G D ++ D Sbjct: 110 VQLFCERIFKNRIIFFWGLGFNSFVGLDFEFRFARFGKIVQHFSDQQSISLNANFLKKGD 169 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 LL S + + + + + G +L IT +A +YT + + + Sbjct: 170 TLLISSISAKDKSILKSIETAKARGAHILLITANHESAYLPYCDGVMYTASFSPEESLGN 229 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 IS + D+++ I + SE ++K Sbjct: 230 ISPQVPALIDLDIIYSKYIDLHQHD-LSQWAKSENILKNW 268 >UniRef50_A8S164 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S164_9CLOT Length = 257 Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats. Identities = 48/270 (17%), Positives = 99/270 (36%), Gaps = 21/270 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN RI + Y L +D+++ + +L + ++S +LA VS++++++ +KLG Sbjct: 1 MNLEYRINESYDRLTANDREVLNRILRNKAQSAGMNSTELAAFCHVSRTTLIRLFKKLGI 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF +L L E ++ + ++E + + + E Sbjct: 61 GGFAEFRLLLKE-------------------RAGMQELARLDMEEIISNYHRMVEGLREY 101 Query: 121 KLHECVTMLRSARRIILTGIGASG-LVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + + A I L G G + + F + G + D + + Sbjct: 102 DYSVILEAIHEAGTIYLYGTGNEQKAIGEEFKRIFLMFGKCCIDLFDYGEVEYASRYFKS 161 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DL +AIS +G + K L+IT +T N + + + LY + Sbjct: 162 GDLFVAISLSGESENGIQVLRFVQCREIKTLSITRWTNNTMARMCRYNLYAGTRMISGGG 221 Query: 240 ASISACHAQGML-TDLLFIALIQQDLELAP 268 A + D+L + ++ + + Sbjct: 222 EPGYEMVATFYILLDMLSVNYLEYERKGHE 251 >UniRef50_D1Y461 Transcriptional regulator, RpiR family protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y461_9BACT Length = 290 Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats. Identities = 53/281 (18%), Positives = 107/281 (38%), Gaps = 11/281 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 +R + +++ +YLL A +S +A + VS++ +V+ A+ LG+K Sbjct: 5 KLQELLRSNLDSMPSKARRVVEYLLTHMREAAFVSIGDVAEQLNVSKAQLVRVARILGFK 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ LK AL EA+ Q ++ D + E++ + A + T N E Sbjct: 65 GYADLKGALKEAVLEQVNPAAMLARAMSEEGD----LSERIRQMEHANLEDTWNRLRVED 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH---ALLATVQASS 178 + ++++A I G SG++A+ +L ++G A + L+ ++ Sbjct: 121 VRSFCELVKAAEGIYCAGWSISGMMAECLHSRLRELGLRAHQMYPGSGCLTLIEQARSVR 180 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 DL++A L A R G K++ +T + A + Sbjct: 181 KSDLIIAFDLPSYSVLLTEALQRGRRNGAKIVTVTDSPAAPICGDADLSFFVSDNSPTFG 240 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S+ L +L L + A + + +++ Sbjct: 241 ----SSLIGPLFLIHILTSRLSIDMGDAAMKALAEQSKILR 277 >UniRef50_Q11LZ5 Transcriptional regulator, RpiR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11LZ5_MESSB Length = 300 Score = 142 bits (358), Expect = 1e-32, Method: Composition-based stats. Identities = 52/287 (18%), Positives = 108/287 (37%), Gaps = 10/287 (3%) Query: 1 MN---GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQK 57 M+ I + L + A Y+L P LS ++ A AGV ++ + A++ Sbjct: 1 MDCATFAAEITRSIGTLPGQLEVAARYVLENPGDVALLSMREQARRAGVQPWTMTRLAKR 60 Query: 58 LGYKGFPALKLALSEALASQPESP--SVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLN 115 G G+ A++ +AL Q + + ++ +++ ++A Sbjct: 61 FGLDGYEAVRELHGKALKEQALGFAGRAGAQMARQREAGGPMLAKEIASAAACQIFALGE 120 Query: 116 VNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATV- 174 + L E + ARR+ G+ +S VA++ A+ L +G A + + Sbjct: 121 AGAAHTLFEAAQAMARARRVYCVGLRSSRPVAEHLAYMLNFLGEKAVYLDFSDGVGLDAL 180 Query: 175 QASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE 234 + ++ DDL+ ++ R AA ++A+T + + + A H + E Sbjct: 181 RFATQDDLVFVVTVAPYTRAAVEAARHAHARSLSIIALTDRPASPVARLARHAILVGTES 240 Query: 235 QATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + A ++L + + + A E I +E + L Sbjct: 241 PSF----FHAMAPAFAAVEILAALVAGEGGDAALEVIARTERQLSDL 283 >UniRef50_A4EUM4 Putative transcriptional regulator protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EUM4_9RHOB Length = 302 Score = 142 bits (358), Expect = 1e-32, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 91/279 (32%), Gaps = 8/279 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + ++ + L ++ K +A Y+L P LS +Q+A AGVS + + A+ LG++ Sbjct: 14 SVTQSLKAQLPQLPRALKVVATYMLEHPGDIATLSMRQVATNAGVSLPNFARLAKALGFE 73 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGE---KLIKENTAAMYATLNVNS 118 + L+ + + S ++ E K + A + Sbjct: 74 TYSELREVYRKQVQQNDISEYHLRAESLQKSGGDAEARETWGKFRTATMDNLTAVFDSID 133 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWK-LMKIGFNAAAVRDMHALLATVQAS 177 + +L +R + + G+ AS + + M G D V Sbjct: 134 PDYFASVAKVLNDSRTVYIVGMQASASFSAYAHYIGGMASGKFRLVRGDGGVFADPVADI 193 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 D+++A+S R A KV+AIT + A + L Sbjct: 194 GEGDVMIAVSQQPCARASIELARIARERTAKVIAITDSPAAPIALEADYVLLGPNRSPLF 253 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + +L + L ERI EA Sbjct: 254 ----FESYVGSTVLIEALIGFFTIGQSSRTVERIERIEA 288 >UniRef50_B9DLT1 Truncated putative RpiR family transcriptional regulator (Fragment 1) n=1 Tax=Staphylococcus carnosus subsp. carnosus TM300 RepID=B9DLT1_STACT Length = 190 Score = 142 bits (358), Expect = 1e-32, Method: Composition-based stats. Identities = 48/192 (25%), Positives = 97/192 (50%), Gaps = 4/192 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L ++ +Y L +S+KK+ADY+L +P +++ LA+ S SSVV+F K+ Sbjct: 3 NILYKLESKYPSLTKSEKKIADYILRRPQQIVDMTTHTLADRTSTSPSSVVRFGYKITDG 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK +S+ ++++ + + +++ ++ L + K++ T + + E Sbjct: 63 GFQELKTEVSKYMSARTKPRQL----ELQSNESLDTIKRKMLSRTTQTLCKVSDAVDEND 118 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + L+ +R + + G GAS + A++ KL ++G N + +H L+ + D Sbjct: 119 IDKVCARLKQSRTVFIFGFGASYVAARDLFQKLSRVGINVHCIEGVHTLINVIATHDARD 178 Query: 182 LLLAISYTGVRR 193 L IS +G + Sbjct: 179 CLFIISNSGRTQ 190 >UniRef50_B8IEA9 Transcriptional regulator, RpiR family n=4 Tax=Rhizobiales RepID=B8IEA9_METNO Length = 296 Score = 142 bits (358), Expect = 1e-32, Method: Composition-based stats. Identities = 56/287 (19%), Positives = 108/287 (37%), Gaps = 10/287 (3%) Query: 1 MN---GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQK 57 M+ I ++ L + A ++L P+ LS ++ A AGV S+ + AQ+ Sbjct: 1 MDHGPLTDEIVATFETLGPQLQAAARFVLEHPNDVALLSMREQARRAGVQPHSMTRLAQR 60 Query: 58 LGYKGFPALKLALSEALASQPESPSVPIHNQIRGD--DPLRLVGEKLIKENTAAMYATLN 115 LG G+ ++ + A+ S Q+ R + ++I A + Sbjct: 61 LGLPGYDDVRALYAAAVREGSLGFSGKAGTQVAHQKAKGERALAAEIIASVHAQIGRLTE 120 Query: 116 VNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATV 174 + ++L L SA RI G+ + V FA+ + +G A + L + Sbjct: 121 PPALDRLVTAAGRLASAERIYCLGLRSCHPVVAQFAYVMSFLGERAVLLDAGAGTGLDPI 180 Query: 175 QASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE 234 ++++ D+LLA S R A G V+A+T + L A + + Sbjct: 181 RSATTRDVLLAASIAPYTRATIETAQYADNQGVPVVAVTDSLVSPLAGVARETIVVPTDS 240 Query: 235 QATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + ++ ++L L + + + IR +EA + Sbjct: 241 PSF----FHTVAPAFVVGEVLAALLAGRGGQASLAAIRRTEAQLAAF 283 >UniRef50_C3RPB8 LacI-family transcriptional regulator n=2 Tax=Bacteria RepID=C3RPB8_9MOLU Length = 255 Score = 142 bits (358), Expect = 1e-32, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 98/258 (37%), Gaps = 20/258 (7%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 ++ L +++ + Y++ ++S + LA VS ++VV+F QKL GF K Sbjct: 6 KQIANLNETETFIYRYVMKHIKVVTNMSVRDLAECTHVSTATVVRFCQKLDCNGFVEFKT 65 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L + D V + + + EK+++ V Sbjct: 66 KLK----------LFNDGLTLPETDDEIDVLLEFFNYARSVDFK-------EKINKFVKY 108 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 ++ A+ I GIG SG + + A +G+ + ++ D + LL+A++ Sbjct: 109 IKEAKSICFLGIGTSGTLGKYGARYFSNVGYYSQSIDDPYYPPPVDGN--ESSLLIALTE 166 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-NSASISACHA 247 +G RE+ K++ IT + + Q A +Y ++ + +IS+ Sbjct: 167 SGETREVIDQLKMYQSQNTKIVVITNKPGSTIDQMADLGIYYYVKDIILPQTYNISSQVP 226 Query: 248 QGMLTDLLFIALIQQDLE 265 + + + L + Sbjct: 227 VLYILERVTHELQNAKEK 244 >UniRef50_Q1JDL9 Transcriptional regulator, RpiR family n=21 Tax=Streptococcus RepID=Q1JDL9_STRPB Length = 280 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 45/278 (16%), Positives = 112/278 (40%), Gaps = 13/278 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + +I + + +K +A + + T + L++ ++ +SQ+++ +FA+K G+ G Sbjct: 11 LITKIEASLEHMTSLEKGIAHFFITTDLTPQELTASEIVKRLHISQAALTRFAKKCGFTG 70 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + A +L E+ + ++++ + A + T + +EEKL Sbjct: 71 YRAFAFDYLHSLQESQETFQSIH----------LELTKRVLMDYDALINKTYELVNEEKL 120 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 ++ ++ R+ G G+SGLVA+ + M++G A D + + L Sbjct: 121 LNLAKLIDASERVYFFGKGSSGLVAREMKLRFMRLGLICDAYSDTDGFTWANSLVNENCL 180 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + S +G + A + + G K + +T + + Q + Sbjct: 181 VFGFSLSGKTNSVITALHQASQRGAKTVLLTTDNQTEFDDSLDI-IPVSSTHQLHYGNRV 239 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 S ++ D+++ ++ D + +++ ++ K Sbjct: 240 SPQFPLLIMMDIIYAYVLAIDKPHKEKIFKNT--IIDK 275 >UniRef50_C5BWC4 Transcriptional regulator, RpiR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5BWC4_BEUC1 Length = 335 Score = 142 bits (357), Expect = 2e-32, Method: Composition-based stats. Identities = 55/265 (20%), Positives = 98/265 (36%), Gaps = 1/265 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +R L + + A +++ P A S +LA +GVS +++ + A LGY Sbjct: 38 SPLQALRDALPSLTGALARAAAHIVDAPAEASRGSITRLATASGVSPATLTRLAGLLGYD 97 Query: 62 GFPALKLALSEALASQPES-PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GFPA++ A++ + + I I DDP V L+ ++ A + Sbjct: 98 GFPAMRAAIATEHGREVQGGWQRDIGTAIAPDDPADQVLGVLVAHSSRAARNAMGALDLA 157 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + +A RI L G + +L++IG A P Sbjct: 158 GATRAADWIAAAERIHLYGEWGDSVSLHELYLRLLRIGRPVWFHEGKQATRVAASLLRPG 217 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ +A+S G G + ITG L A L+T E + Sbjct: 218 DVAIALSRAGHDAVGEAFCALAQENGAHTVVITGDPEGPLADVADLVLFTGTREGTAWTD 277 Query: 241 SISACHAQGMLTDLLFIALIQQDLE 265 + + + LL++ + Q+ + Sbjct: 278 YFAGRASDTLTAALLWVLVAQRVPD 302 >UniRef50_A6M2I0 Transcriptional regulator, RpiR family n=3 Tax=Clostridiales RepID=A6M2I0_CLOB8 Length = 248 Score = 142 bits (357), Expect = 2e-32, Method: Composition-based stats. Identities = 45/266 (16%), Positives = 100/266 (37%), Gaps = 21/266 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I + Y+ L +SD + Y+L + +S Q+LA++ VS +++++F KLG Sbjct: 1 MKLETLIDENYEKLNESDLYIWKYILHHKKECQTMSIQELASKCNVSHTTILRFTHKLGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +G+ +K+ L + K I++ + T+ + E Sbjct: 61 QGYSEMKIHLKWEDKQRNSFD------------------NKEIEKTYKDIEKTMEIMKER 102 Query: 121 KLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++ ++ A +I + G GA A++ ++ + + A S Sbjct: 103 DFYDVFELVEKADKIYVYGSGAVQKNAAKDLKRSMIFGNKLIYVIEGREETNIILDALSS 162 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+ +S +G +N A ++ K+++IT N L + L + Sbjct: 163 KDIFFLLSLSGNNLFMNEFAQKLKEKDVKIISITQVGNNELASISDISLQFYTHPISVGE 222 Query: 240 ASIS--ACHAQGMLTDLLFIALIQQD 263 + ++ +L + ++ Sbjct: 223 NKTKLYSTTQFFLINQILLLKYLEYR 248 >UniRef50_UPI000196B851 hypothetical protein CATMIT_00169 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B851 Length = 283 Score = 142 bits (357), Expect = 2e-32, Method: Composition-based stats. Identities = 45/278 (16%), Positives = 97/278 (34%), Gaps = 14/278 (5%) Query: 1 MNGLLRIR---------QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSV 51 M I + L+ ++K + Y++ D ++SS++LA + +S+ Sbjct: 1 MLLDELIESGGNLQKGIELNTKLSDAEKSICQYIIEHLDQVPYMSSRELARLTYSNPTSI 60 Query: 52 VKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMY 111 ++ ++K GY F K + L ++ +D K + + Sbjct: 61 LRLSRKFGYANFNDFKFDIVLKLRDMHMPKV-----ELNKNDSGLECINKTAQLYDNVIA 115 Query: 112 ATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL 171 T N S + E + +L I + + +A LM IG + + Sbjct: 116 RTKNNISLAQYDEIIDVLNKCEAIDIIATDMNANIAHYAQHVLMPIGKQIHVYENQDLQV 175 Query: 172 ATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI 231 +++ ++ TG +R + A + R G +AIT + + ++ + Sbjct: 176 HASLNVPSTHVVILVTKTGFKRHILDNARILCRRGITTIAITPDDKGPISKCVTYTIKAE 235 Query: 232 AEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPE 269 + E + + + DL F +L + E Sbjct: 236 SNETFVKLRDVIFSISTKFIFDLFFTSLCAINYENTLN 273 >UniRef50_B6FRS1 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FRS1_9CLOT Length = 237 Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 47/247 (19%), Positives = 103/247 (41%), Gaps = 20/247 (8%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 + + +Y++ ++++ ++LA+ VS SS+++F +K G G+ ++ Sbjct: 10 FNDLELVIYNYIMKNSSQVQYMTIRELADAVHVSTSSIMRFCKKAGCDGYAEFRVKFKLY 69 Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR 133 L S+ E + E EE++ V M+R A+ Sbjct: 70 LESRKEIQPQND-----------------LSELLHYFQGVHTSAFEEQISRAVDMVRGAQ 112 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRR 193 ++IL G+G+SG +A+ A +G + + D + ++ D +++A+S +G R Sbjct: 113 QVILIGVGSSGTLARYGARYFSNVGKFSQYIDDPYYPISRDTYI--DTVVIALSESGETR 170 Query: 194 ELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL-YTIAEEQATNSASISACHAQGMLT 252 + + R K+L+IT + L + + L Y + E ++++ L Sbjct: 171 QTIEMTESFKRHQCKILSITNKDSSTLSKISDMNLSYFVTERFVEGRYNVTSQVPVLFLM 230 Query: 253 DLLFIAL 259 + + L Sbjct: 231 ETIARRL 237 >UniRef50_A1WR14 Transcriptional regulator, RpiR family n=25 Tax=Burkholderiales RepID=A1WR14_VEREI Length = 334 Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 98/269 (36%), Gaps = 11/269 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L I Q Y+GL++ K ++ ++ D Q +A + GV S++V+FA+ G+ G Sbjct: 40 FLQCISQEYEGLSKQLKAISRHVEAHRDHLGLQGIQSVAEQCGVQPSAMVRFAKHFGFSG 99 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDD------PLRLVGEKLIKENTAAMYATLNV 116 F ++ E LA Q + + ++ IK + A M Sbjct: 100 FSEMQRLFREGLAEQIAPGRAYNLRLRDVIEAGSTSLQSPQIADEFIKGSIAGMQQLRQE 159 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQ 175 ++ V +L + I + G S VA + L + ++ Sbjct: 160 LDQQAFARAVELLADTQAIWIAGSRRSFPVAVYLDYALQHTEKRIGLLNALGSMQQGQIR 219 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 + D+L+AIS+ E A + + G +V+AIT L + A L Sbjct: 220 SVRAGDVLIAISFNPYAEETLQVAQQATQRGARVIAITDSRMGPLARTAEATLIVQDSAT 279 Query: 236 ATNSASISACHAQGMLTDLLFIALIQQDL 264 A A L LF+AL + Sbjct: 280 F----GFRALTATMGLAQSLFVALAYRLE 304 >UniRef50_C2BN80 RpiR family transcriptional regulator n=1 Tax=Corynebacterium pseudogenitalium ATCC 33035 RepID=C2BN80_9CORY Length = 284 Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 54/285 (18%), Positives = 105/285 (36%), Gaps = 10/285 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + +I ++ L+Q++K A LL + Q A +A VS +++V+F Q LG+K Sbjct: 4 SITEQINSKFPSLSQAEKDAARCLLNSYPWVGLKTVQHFATQANVSSATIVRFVQTLGFK 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRG--DDPLRLVGEKLIKENTAAMYATLNVNSE 119 GF + AL E + + SP + +D L + + AT + Sbjct: 64 GFKQFQNALMEETSEREASPLTQAGDDFTNSANDLLAQTLNQTADAFLRGIEATFKYAQD 123 Query: 120 EKLHECVTMLRSARRIILTGIGASGLV--AQNFAWKLMKI-GFNAAAVRDMHALLATVQA 176 E + V L S + + G S AQ+ +L G A+ L+ + Sbjct: 124 EDFEKVVA-LFSNQERRIVSHGGSFSWVLAQHLVAQLSLFRGKQIASPLSDLPLIELIYQ 182 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 +S +D+ + + + A + G V+ +T + + + L E Sbjct: 183 TSANDIWVFFDFRRYSPQSEQIARLVKGNGAAVVLVTDRWMSPISSYSDVSLVARVE--- 239 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 L + + + ++ + + + E L K+L Sbjct: 240 -AFGPSDTLVPAFALVEAICECVSRKIGKAGIQYLEAFEVLRKEL 283 >UniRef50_A4JTS2 Transcriptional regulator, RpiR family n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JTS2_BURVG Length = 285 Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 55/275 (20%), Positives = 101/275 (36%), Gaps = 9/275 (3%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 R+R+ L+ +++KLA LL A + Q A A VS +V++ KLG+ +P Sbjct: 10 DRLRRMLDSLSPAERKLARVLLGNYPVAGLETIAQFAQRAEVSGPTVLRLTTKLGFATYP 69 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 + AL + L + +SP + + + + K+ + TLN Sbjct: 70 DFQQALRDELEDRLQSPILAQRDVLTDSNDP---LVKMSDALVQNLRETLNDLPRATFDS 126 Query: 125 CVTMLRSARR-IILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASSPDDL 182 V++L RR I L G +A +L + N + T+ D+ Sbjct: 127 VVSLLADPRRSIYLLGGRFGYALAVYLRTRLHMLRKNVHLIGGQSSTWPETLVDMGSKDV 186 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L+ +R++ + G +V+ T + + A+H L E + Sbjct: 187 LVVFDARRYQRDIEEFSSAAAARGIQVVLFTDQWLSPIVNVAAHTLIMRVEMPTRWDTA- 245 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 L + L + + + A R+ E L Sbjct: 246 ---VPTLALLEFLLATITDRHWQEARSRLERLETL 277 >UniRef50_Q5WBH0 RpiR family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WBH0_BACSK Length = 287 Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 59/281 (20%), Positives = 118/281 (41%), Gaps = 7/281 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L +++ L +S K + DY++ ++ QL+N G S ++V++ +GY Sbjct: 3 NPLEVLKESAGSLPRSQKLVVDYMIDHYSEVGFMTVGQLSNNVGTSTTTVMRLMSNIGYS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ A + +L L + N + + + +N E Sbjct: 63 GYSAFQKSLQAHLKEEAAPQIRLEKNLKNLSHNESWL--HHYELQLEQIQKANQLNVETN 120 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMK-IGFNAAAVRDMHALLATVQASSPD 180 L+E V ++ SA +I T + + VAQ L + +G + D + V + + + Sbjct: 121 LNEAVKLICSASQIYCTSVRSGLPVAQYLTHNLNRMLGNTKLTLADSSDWVDDVISFTEN 180 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DLL+ +SY L A++ + G VLAIT + L A A+ + A Sbjct: 181 DLLIVVSYARYGERLLHYAEQAKKKGASVLAITDKFSSPLSAYADLVFACPAD----SIA 236 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S ++ + + D L +L + E +R++ ++++ ++ Sbjct: 237 SHNSIVSSIFIVDYLIGSLSLEKTEYISKRLKEVDSILTQM 277 >UniRef50_A6LZ63 Transcriptional regulator, RpiR family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LZ63_CLOB8 Length = 288 Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 51/270 (18%), Positives = 120/270 (44%), Gaps = 7/270 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + +I R + L S+ ++A++++ + + + +A E VS++S+ +F +K+G+KG Sbjct: 8 VIAKIISRQKNLTFSENEIANFVINNAEFVINNTITNIAIETKVSETSINRFCKKIGFKG 67 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F K+AL++ + + + D + + + T ++ +E L Sbjct: 68 FNDFKIALAQDNFYRNLKANDKSRDNNSLIDS-------IASDYNELILNTCSLINEMDL 120 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V M++SA+++ + + S A +L +G A + D++++ SS DDL Sbjct: 121 IKVVEMIKSAKKVNIFSVFGSWQSAIELKQRLNMMGIKAESYNDVYSMKLCSANSSQDDL 180 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ I+ R++ + K++ IT + L + + T + N+ I Sbjct: 181 IIGITRNISVRDIQEPLISGRQNNAKIVTITSYDSPKLSELTDIKIITSDKLAIENNTVI 240 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIR 272 S D++ LI+ + + +++ Sbjct: 241 SDNMTFLFTIDVIVGMLIKSNKKYLQKKLD 270 >UniRef50_A6P0T4 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P0T4_9BACE Length = 274 Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 59/266 (22%), Positives = 107/266 (40%), Gaps = 11/266 (4%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L ++++K+ DY+ D S QLA G+S ++V +FA+ +G F LK + E Sbjct: 11 ELTRAEQKILDYINTNTDAFLFSSIGQLAQRLGLSDATVSRFARHVGCADFKDLKSMVVE 70 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 A + + ++ + T E + + V L SA Sbjct: 71 QAAGPAAKVTETLSRDGAFS------PAAWLERQQMYLQKTARQLDEAEFNRGVETLASA 124 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSPDDLLLAISYTGV 191 RRI L G AS +A+ A++L ++G + + LL + + DL++ S++ + Sbjct: 125 RRIFLHGKNASSSLARMLAFRLGRLGLQVSLLPSGGSELLEGLLQAGKQDLVVMFSFSKL 184 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGML 251 RE + D G + LA T ++RA L+ E+ + A L Sbjct: 185 SREGRVILDYSRTAGYQTLAFVSRTCIPPEERADISLFAYRGEEKE----YHSMAAPTAL 240 Query: 252 TDLLFIALIQQDLELAPERIRHSEAL 277 DL+ +A+ + + + L Sbjct: 241 LDLMVLAVTSRLGARGTDSLERLHQL 266 >UniRef50_B6QWT3 Putative transcriptional regulator protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QWT3_9RHOB Length = 292 Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 49/281 (17%), Positives = 104/281 (37%), Gaps = 7/281 (2%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 + ++ + Y L++ KK A Y+L P LS +Q+A A V ++ + A+ L + + Sbjct: 9 IDQLTKAYPNLSKQLKKSAAYVLEYPSDVATLSMRQVAARAEVPPPTMNRLAKSLEFDTY 68 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDD--PLRLVGEKLIKENTAAMYATLNVNSEEK 121 A++ + + + + + + Sbjct: 69 NAMRDVYRGGFEDFSSNYPSRAGELQATHGTSDIEASLQSFKSAAIGNLKHLFDTIDRDH 128 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSPD 180 L + ++ L +AR +++ G+ AS +A + N + + V+ + D Sbjct: 129 LQQIISSLATARNVVVVGMHASHSLANYLHYVASMCFRNWRLINRRNGEIADQVEYINAD 188 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++AIS + L A VG KV+ IT + L ++ L T + Sbjct: 189 DVVVAISLNPCAADTVLVAKRAYEVGAKVIGITDTRTSPLATYSTDLLLTPVQSPHF--- 245 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + A L +++ L+ ++ + I E +L Sbjct: 246 -FESYVATAALLEMILGFLVADSGQVVIDNITRLERCRNEL 285 >UniRef50_Q6LK40 Putative transcriptional regulator n=3 Tax=Vibrionaceae RepID=Q6LK40_PHOPR Length = 280 Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 54/265 (20%), Positives = 102/265 (38%), Gaps = 9/265 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 I +RY L+Q +++ADY++ QP + +A +A V S++ +FA +G+ G Sbjct: 17 LRDLIVKRYDKLSQRLQQVADYIMAQPMLVAVETMATIAEQANVPLSTLSRFANTMGFSG 76 Query: 63 FPALKLALSEALASQPESPSVPI----HNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 F ++ + ++P + + + + N AM S Sbjct: 77 FSQMQALFRDQYLNRPRDYKERVRQARDQDCFEPESPTSIFQDYGAANIEAMEQLQVSVS 136 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQAS 177 +KL V++L A I + G+ + VA + LMK N + D L + Sbjct: 137 PQKLERAVSLLDKADTIYIQGMRRAYPVAFYLWYALMKSDNNVVLLDDHGGMLAPMTRRI 196 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 S D+L+ I++T E + ++AIT N+ + C E Sbjct: 197 SDKDVLVTITFTPYAPETSELIKLASEKNVPIIAITDNQMNSQGSKMDVCFEVQEGEVM- 255 Query: 238 NSASISACHAQGMLTDLLFIALIQQ 262 + + L L ++L+ + Sbjct: 256 ---GFRSLSSSMYLAQTLAVSLMCR 277 >UniRef50_C3RQD3 Predicted protein n=1 Tax=Mollicutes bacterium D7 RepID=C3RQD3_9MOLU Length = 261 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 89/270 (32%), Gaps = 13/270 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M +I Y L ++KK+ +L P+ S N S+S++++FA+KLGY Sbjct: 1 MKFKEKISIYYTSLTPTEKKICTKILDNPEIIIKNSIIDAGNRCDTSKSAMLRFAKKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ K A+SE S+ D +++ ++Y +++ E Sbjct: 61 SGYSEFKYAISEDYDSKQN---------DETIDVNESFLKRISSLFAESVYNLGDLDYEL 111 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L + M+ + GIG + A + L V D + + Sbjct: 112 QLQQLAKMIDEYSYVKSIGIGNTAFCANQLVYSLYSYNKFIECVGDCIQFDYLKNCLNSE 171 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN-- 238 LL+ S T + G K++ IT + L + ++ Sbjct: 172 YLLIIFSVTCSETKYLDLVKTAKNKGAKIVVITMNNEHKLISLSDLSFILPSQTSPLQNK 231 Query: 239 --SASISACHAQGMLTDLLFIALIQQDLEL 266 + +++ + Sbjct: 232 KVLKQLDNRTMMYFFAEIISYYYGLHLEKK 261 >UniRef50_C4ZEF4 Glucokinase n=2 Tax=Clostridiales RepID=C4ZEF4_EUBR3 Length = 250 Score = 141 bits (355), Expect = 3e-32, Method: Composition-based stats. Identities = 40/250 (16%), Positives = 100/250 (40%), Gaps = 22/250 (8%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 + + Q + + +Y++ + ++ ++LA E VS +++++F +K+G +G+ +L Sbjct: 5 EMIKSFNQLEMDVYNYIISNEEKVVYMKVRELAEEVHVSTTTILRFCKKVGCEGYSEFRL 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L + ++S+ + + E + E V + Sbjct: 65 KLKQEVSSKEQKKINLD-----------------LTAVKDFFERVQTQAFAENIQEAVKL 107 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 L A II G+G S + + A +G+ + A+ D + + +A+S Sbjct: 108 LTKASSIIFVGVGNSSFIGKYGARYFNNVGWFSFAIDDPFTPVFRGK--GERIATIALSV 165 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN---SASISAC 245 +G + + A+++ R G +++IT +L + + + E +++ Sbjct: 166 SGETEQTLMLAEKLKRRGSSLISITNKANCSLAKMSDCNINYYVSEYKYKQDEDYDLTSQ 225 Query: 246 HAQGMLTDLL 255 A + +L+ Sbjct: 226 MAVVFILELI 235 >UniRef50_C2H000 RpiR family transcriptional regulator n=26 Tax=Enterococcus RepID=C2H000_ENTFA Length = 253 Score = 141 bits (355), Expect = 3e-32, Method: Composition-based stats. Identities = 56/261 (21%), Positives = 98/261 (37%), Gaps = 22/261 (8%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 ++ Q L + + + Y+L + +QLA VS S++++F K+GY GF LK Sbjct: 5 EKVQTLNELEMLVYHYVLEHLHQIPQQTIRQLATSCHVSTSTILRFCNKMGYAGFSELKY 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 A+ E + + +KL +E M L + M Sbjct: 65 AVKEEAKQTQTFENFYDATVH-----VDAFLKKLNQETYYEM-----------LRPAIQM 108 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + AR + TGIG SG++ + + N+ ++ D + + L L +S Sbjct: 109 IVQARHVAFTGIGTSGILGSYGSRYFANLNINSYSIADPFTPIPKRGF--ENTLALILSV 166 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL--YTIAEEQATNSAS--ISA 244 +G E+ + G KVL+IT + + + A + + Y E S + Sbjct: 167 SGETNEMIKQMTDFKTAGAKVLSITNNQHSTIARLADYNISYYMPDERSPFADKSVNTTT 226 Query: 245 CHAQGMLTDLLFIALIQQDLE 265 L +LL Q E Sbjct: 227 QIPVIALIELLAHQASQLLKE 247 >UniRef50_C3RNE4 Transcriptional regulator n=3 Tax=Bacteria RepID=C3RNE4_9MOLU Length = 263 Score = 141 bits (355), Expect = 3e-32, Method: Composition-based stats. Identities = 52/261 (19%), Positives = 99/261 (37%), Gaps = 18/261 (6%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + + L +SD + +Y+ + ++ + L + VS++++++F++K+G Sbjct: 1 MQLNELVNLHFDDLNESDLYIWNYINNHREVCTKITIEDLGKKCNVSRTTILRFSKKIGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GF LK L ++ I + Sbjct: 61 EGFAELKYYLRNEQTLADVGLGKTVN----------------IYALFENHAKMIRELQNR 104 Query: 121 KLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + C M+ A+RI + G VA+ + + +K+G V + +A + Sbjct: 105 DYNTCCRMIDHAKRIFVVSSGTIQRSVAKELSRQFLKLGIIMTLVNGDSEINMLARAITA 164 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-N 238 DDLL+ IS TG + A VG K ++IT N+L A +Y + Sbjct: 165 DDLLIIISLTGESESVIRIAKVAKTVGSKTISITRINANSLSLLADEPIYIFFGDFPIVF 224 Query: 239 SASISACHAQGMLTDLLFIAL 259 + ++ LT+LLF Sbjct: 225 ETAYTSPTMFFALTELLFANY 245 >UniRef50_A6M2C0 Transcriptional regulator, RpiR family n=50 Tax=Bacteria RepID=A6M2C0_CLOB8 Length = 249 Score = 141 bits (355), Expect = 3e-32, Method: Composition-based stats. Identities = 37/247 (14%), Positives = 94/247 (38%), Gaps = 19/247 (7%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 + Q L + L Y++ + ++ ++LA+EA VS +++++F +KL +G+ K+ Sbjct: 5 EIIQSLNDLELSLYRYIMKNIEKVVYMRIRELADEAHVSTTTILRFCKKLNCEGYSEFKV 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L + ++ N + KL+ + Sbjct: 65 KLK-----------------LYLEENESTKVNNDTSIIVDFFKKLDNSELDRKLNVLCDL 107 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 ++ A ++ G G SG++ + A IG + + D + D +++A+S Sbjct: 108 IKKASNVVFIGTGTSGILCKYAARYFSSIGKFSMYIDDPYFP--RNYKLYEDSIIIAMSV 165 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 +G R + + R +++IT + + + + +++ + I+ Sbjct: 166 SGETRTVIDYISNIKRENTTLVSITNSENCTISKISDLNISYYVQQERLGISDITTQIPV 225 Query: 249 GMLTDLL 255 + + + Sbjct: 226 LYIIESM 232 >UniRef50_B9K550 Transcriptional regulator n=1 Tax=Agrobacterium vitis S4 RepID=B9K550_AGRVS Length = 313 Score = 140 bits (354), Expect = 4e-32, Method: Composition-based stats. Identities = 54/284 (19%), Positives = 103/284 (36%), Gaps = 10/284 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M RI L+ + +++ADY+L P + +++LA VS +V +FA+ LG+ Sbjct: 13 MPMSQRI--IQATLSPAHRQIADYVLDYPLRVAAMRAEELAEIVHVSVPTVNRFARALGF 70 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ + L + + + + V + T + T E Sbjct: 71 AGYAQFRADLVLGYETALAPVEK-LQRRSQAATSPADVFANNLAMITRNIERTHQALDTE 129 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAA---VRDMHALLATVQAS 177 L + ++ SARRI + G+G+S + + + V ++ Sbjct: 130 TLSRAIGLILSARRISIIGLGSSAWLGGLMQRRFDLFCDDVRLLATVEGASFAARALRNV 189 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 DL++AI++ + A M G VLA+T + L A+ L+ E Sbjct: 190 RAGDLVIAIAFPRYMADTVTLAKRMRDAGADVLALTDNASSPLVAHATMTLFAQVESDYF 249 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S + L + L A+ + + ++ L Sbjct: 250 ASCE----ASALALIESLSAAVSYASGRSMQAATQLVDTVLPYL 289 >UniRef50_D2NRV5 Transcriptional regulator n=2 Tax=Rothia mucilaginosa RepID=D2NRV5_9MICC Length = 272 Score = 140 bits (354), Expect = 4e-32, Method: Composition-based stats. Identities = 39/276 (14%), Positives = 98/276 (35%), Gaps = 21/276 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + +++++++ ++L + + LA++ S SS+++ +KL + Sbjct: 1 MDLQDVVNANQHRFSETEREILAFMLENEEFVAESTINSLAHKTYTSTSSIIRLTKKLNF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK + +L + I+ + T + Sbjct: 61 SGFAELKYFIKSSLNRSEPFNP------------------RFIESGREDIQRTYDYLEHM 102 Query: 121 KLHECVTMLRSARRIILTGIGASGLVA-QNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 +L + + AR + G G + A Q F + G + + + + + Sbjct: 103 ELSGLLKRIHEARTVYCFGTGYAQRNAVQEFTKSMQVCGKFCQVIPARNEFESAMNNMTQ 162 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD+++ +S++G + + ++A+T N + A + L+ ++ Sbjct: 163 DDVVIIVSFSGQTENMREHIKMLALRRIPMIAVTAIGVNYMSSHAEYSLHYQTTPTQIST 222 Query: 240 A--SISACHAQGMLTDLLFIALIQQDLELAPERIRH 273 + A +L D + I+ E ++ Sbjct: 223 QRKPYYSFVALSVLLDYIVRRYIEHVENERRESLQD 258 >UniRef50_C3RRE4 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RRE4_9MOLU Length = 290 Score = 140 bits (354), Expect = 4e-32, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 96/279 (34%), Gaps = 7/279 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + + ++ + Y+L + +S++ LA E + S++++F QK+GY Sbjct: 16 MNLVDLLNDSK-QFNETQNIICQYILNHSEDVVKMSARALAKETYTNASTIIRFVQKIGY 74 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + + K+ L +I + + +K+ + + T N S + Sbjct: 75 ENYNDFKIHLVHD-----LKEYQAADIKITEKEKSISIVDKISELEKNVIEKTKNQLSLQ 129 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ +L+ I A+ +A A + L + Sbjct: 130 QIEYIAELLKKTTYIDFISSDANACIADYACHLFFLERKIANNYTTSNQQLYLTLTELKE 189 Query: 181 DLLLAISYTGVRRELNLAADEMLRVG-GKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 ++ IS G ++ E+ + K++AITG + + + L I Sbjct: 190 HVVFVISRRGEDEKILKVVQELHKNKEIKIIAITGRKESPIARYCDEILSAIHIGSFVEL 249 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + + + + LF L D + + E + Sbjct: 250 RDMIFQVSAQYIINCLFSLLFTDDYQSIVQFNDEYEKIY 288 >UniRef50_C3RI70 Phosphosugar-binding transcriptional regulator n=4 Tax=Bacteria RepID=C3RI70_9MOLU Length = 284 Score = 140 bits (354), Expect = 4e-32, Method: Composition-based stats. Identities = 43/277 (15%), Positives = 111/277 (40%), Gaps = 3/277 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN R+ L +++ L DY+ P+ ++S+ +++ +S ++ + +KL Sbjct: 1 MNIFSRL-DNLTDLTTNEQTLVDYMKNNPERFINMSADEISAACFISIPTIYRLCKKLEL 59 Query: 61 KGFPALKLALS-EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G LK+ +S E ++ + ++ + K+ + + A+ N+ Sbjct: 60 NGLAQLKVMVSTSIRDYLKEKKTIDYNYPFSQNETQYQITMKMKELYEQTLIASNNLIDL 119 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++L + L++A+ I + + +NF +++ +IG + + L +S Sbjct: 120 DQLRLIASALKNAQFIDMYTSAGNLYFVENFKFQMSEIGRFVNVPVEEYQQLLAAASSDK 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT-IAEEQATN 238 + + + +S+ G ++ + + ++ I+ T +L + LY E Sbjct: 180 EHIAIVVSFEGRGMIVDKIVKLLKKNNTPIILISSTTLKSLVSLCDYNLYLSPYENHYNK 239 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 +S S + L D ++ + D + + + Sbjct: 240 ISSFSTRLSLLYLLDCIYTCYFKLDYDKNVKYKTETY 276 >UniRef50_D1B967 Transcriptional regulator, RpiR family n=2 Tax=Synergistaceae RepID=D1B967_THEAS Length = 288 Score = 140 bits (353), Expect = 5e-32, Method: Composition-based stats. Identities = 52/278 (18%), Positives = 104/278 (37%), Gaps = 9/278 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + R + +++ +YLL A S +A + VS++ +V+ A+ LG++G Sbjct: 6 LQALMMDRIDSMPNKARRVVEYLLSNMREAAFRSIGDVAEDLKVSKAQLVRVARMLGFEG 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + LK AL A+ Q P + + + + + K A + T S Sbjct: 66 YSELKDALQRAILEQ----VNPAAMLAKVSNSEDSLPDTIYKMEHANLDDTWTQMSAASS 121 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQASSPDD 181 M+ A I G G S +VA++ +L + N+ ++ L V+ + D Sbjct: 122 ASFCQMVTEANNIYCLGWGISSMVAESLQVRLRVMNLNSFLLKRGTLTLHEQVRVAREGD 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 LL+ E+ + + G ++++IT + + A L+ A Sbjct: 182 LLVVCELPSYVVEVTESVEIAHSNGCRIISITDSPAAPVCRFADLSLFVSASSPTFG--- 238 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 S+ L +L L + + A + + + Sbjct: 239 -SSIIGPLFLVHVLTSILAIRMGDRAKKALEEQARFLH 275 >UniRef50_C9XQG1 Phosphosugar-binding transcriptional regulator n=4 Tax=Clostridium difficile RepID=C9XQG1_CLODC Length = 251 Score = 140 bits (353), Expect = 5e-32, Method: Composition-based stats. Identities = 56/262 (21%), Positives = 106/262 (40%), Gaps = 21/262 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M R ++ ++ + +Y+ + LS Q LA++ +++V+ +K+ Y Sbjct: 11 MEFYERAKKYEYKFTDTEDMIIEYMRKNKEEIVKLSIQSLADKFFTVPNTIVRLCKKMEY 70 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK L E L ++ + P + I TL + E Sbjct: 71 DGFSQLKNNLKEELKNEDKEPKNGFESDI---------------------KKTLELIDYE 109 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 K+++ +++ +R II+ GIG + + + ++ N H +L + Sbjct: 110 KINKVADIIQKSRSIIVYGIGQNIPLCEILVKEIRGGHDNITYYSQRHEVLHDIGKLGEQ 169 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ A+S +G +E+ AA + G KV+A+T N LQQ A LY + + N Sbjct: 170 DMFFALSLSGETKEVIEAAKTAVNKGCKVVALTHICENQLQQIADISLYCYSTIKQVNGY 229 Query: 241 SISACHAQGMLTDLLFIALIQQ 262 +IS M+ + + Sbjct: 230 NISDKVPIMMIMRAIIEQYWLR 251 >UniRef50_Q03NG7 Transcriptional regulator n=18 Tax=Bacilli RepID=Q03NG7_LACBA Length = 269 Score = 140 bits (353), Expect = 5e-32, Method: Composition-based stats. Identities = 43/266 (16%), Positives = 99/266 (37%), Gaps = 11/266 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + L+ +++KL DY++ ++ S +++A+ VS ++ ++F +K+G+ Sbjct: 1 MNFFEIVNAHLSELSPNEQKLFDYVVTNMGQIKNQSIREVASATFVSTATFLRFVKKIGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF + L ++ E+ + + +E + ++ V + Sbjct: 61 SGFSEFTTVIKFTLINRQEAERTTPFVVQQ---------KDYREEYLKNIGESIRVIQPD 111 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + V L + G S + GF RD + D Sbjct: 112 HLRQVVDRLAQHPDVFFFAKGVSKHAVAYIDYLYTMAGFKTHFPRDHDYRKQALTQVDND 171 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGK--VLAITGFTPNALQQRASHCLYTIAEEQATN 238 L+ ++Y G E+ +++ + +++IT N +Q + Y + N Sbjct: 172 ALVFILTYKGSDGEMLDMMSQLVGRPVRPLLVSITEPDNNTIQNLSDINFYIFTDGVTVN 231 Query: 239 SASISACHAQGMLTDLLFIALIQQDL 264 IS+ + + +L+ ++ Sbjct: 232 GTDISSRISTISVMELILYQYVEDYG 257 >UniRef50_Q5WD27 Transcriptional regulator n=8 Tax=Bacilli RepID=Q5WD27_BACSK Length = 266 Score = 140 bits (353), Expect = 6e-32, Method: Composition-based stats. Identities = 47/260 (18%), Positives = 106/260 (40%), Gaps = 11/260 (4%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 ++ L+ +++ L Y+ D +S L+ A VS ++VV+ +K+G+KG+ + K L Sbjct: 13 FERLSDTERYLLTYIHDHLDEIATMSIVTLSERAAVSTATVVRLMKKIGFKGYTSFKYKL 72 Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 + + S+ + ++ +++N + T+ + S ++ + V + Sbjct: 73 EQDKQMIDKEGSL---------SDIGNEIKQALQKNEEEVRRTIQLQSIGQIEDAVQKMH 123 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD-DLLLAISYT 189 A +I + G S ++A+ A KL + D + + Q D DL + +S Sbjct: 124 DANKIYIFARGFSQMIAKEMAVKLQVLDKTCEMHDDPNIIRIKSQKMHHDTDLAIFVSLN 183 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY-TIAEEQATNSASISACHAQ 248 G +EL A + + +T + L + + L +E + + + Sbjct: 184 GETKELVEACQNLSIRQVTTITLTTKVNSTLNKLSDMTLIGYKSEHSLIPDYEVRSRLSL 243 Query: 249 GMLTDLLFIALIQQDLELAP 268 ++ +L A + + E Sbjct: 244 NVIARVLLDAYVIRTKESVK 263 >UniRef50_A6X7I1 Transcriptional regulator, RpiR family n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X7I1_OCHA4 Length = 293 Score = 140 bits (353), Expect = 6e-32, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 98/279 (35%), Gaps = 7/279 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M R+ +++ K+ LL A + LA AGVS +VV+FA KLGY Sbjct: 1 MAIRDRLTDGEIDFTRAELKIVRQLLSNYPAAGLNTVAHLAAAAGVSNPTVVRFANKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+P + AL + + SP + + + + ++ + A+ +++ + + Sbjct: 61 DGYPEFQTALLGEVQERMSSPLSMLDTRKPSLE-QENFYQYFLRASIHALESSMQMLPPD 119 Query: 121 KLHECVTMLRS-ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASS 178 + R+ G SG +A + ++ + + + Sbjct: 120 DFEAAIDAAADLNMRVHCLGGRFSGFLAGLLWSHMKQLRGETRWINGTQADQVDWLVDLG 179 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D+L Y + + A + + G +++ T + + + AS L + Sbjct: 180 KRDVLFVYDYRRYQIDTIRFARQAAKQGARIVLFTDRWVSPIAEFASVTLTAAVDT---- 235 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + T+ L L + + RI E L Sbjct: 236 VSPYDTMVPAIAQTEALIAGLTARLANQSRGRIERMEEL 274 >UniRef50_C5EIL1 RpiR-family transcriptional regulator n=2 Tax=Clostridiales RepID=C5EIL1_9FIRM Length = 260 Score = 140 bits (353), Expect = 6e-32, Method: Composition-based stats. Identities = 48/269 (17%), Positives = 95/269 (35%), Gaps = 25/269 (9%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ RI + Y L +D+++ + +L D ++S +LA VS++++V+ +KLG Sbjct: 1 MDLEKRINENYDRLTANDREVLNLILRDKDRTTQMNSPELAAHCHVSRTTLVRLFKKLGI 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F +L L E S ++++ + Sbjct: 61 STFAEFRLLLQEKSGGGTASRLD---------------MQEILSGYHRMVDD----LKAY 101 Query: 121 KLHECVTMLRSARRIILTGIGASG-LVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++ A I L G G + + F + G + D + + Sbjct: 102 DYDTVCQVIHEADTIYLFGTGNEQKAIGEEFKRIFLMFGKCCIDLFDYGEVEYASRNFKA 161 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY-----TIAEE 234 DL +A+S +G + + + L+IT +T N + + + LY E Sbjct: 162 KDLFIAVSLSGESQSGIDVLRFVQCRDIRTLSITRWTNNTMARMCRYNLYAGTKMIGGGE 221 Query: 235 QATNSASISACHAQGMLTDLLFIALIQQD 263 A A +L D+L + ++ Sbjct: 222 GVKQGAGYEMVAAFYILLDILSVNYLEYM 250 >UniRef50_D1Y5K3 SIS domain protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y5K3_9BACT Length = 284 Score = 140 bits (352), Expect = 6e-32, Method: Composition-based stats. Identities = 44/280 (15%), Positives = 102/280 (36%), Gaps = 8/280 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L +I++R + + +K+A Y++ + +A AGVS +SV+KF ++ Y Sbjct: 3 NFLEKIQKRQSAFSPAVRKVATYIMEHYSDIPFCTITDVATAAGVSVTSVIKFCTEMQYS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNV-NSEE 120 F K A+ + + S + + V +++ + + ++ T+N ++E Sbjct: 63 AFSEFKQAMRDHIQQTLISHYNINDDNFTEAH-QQSVLDEVTRLDIENIHRTMNNPINQE 121 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASSP 179 + + + A I G S + A + L G + + + + Sbjct: 122 NIKKFFHLAEKAHIIYTMGFRTSAIFATYTSLLLRMQGLTVFPITPGIGDYIDKMLTVHS 181 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DDL++A S+ +++ + ++ +T + A Q Sbjct: 182 DDLVMAFSFNRYSKDVVKMLKTLHDRKIPIVLVTDDKLSPSYVYADLVFTCSTRTQNY-- 239 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +++ L + +F A + + + E Sbjct: 240 --VASYVGCMSLLNSIF-AYGISHYKNYVKSLSQLEQFYS 276 >UniRef50_B5E566 Transcriptional regulator, RpiR family n=10 Tax=Streptococcus pneumoniae RepID=B5E566_STRP4 Length = 269 Score = 140 bits (352), Expect = 6e-32, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 100/259 (38%), Gaps = 13/259 (5%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + I +A ++K +A + L Q SS+ L VS++++ +FA+K G+KG Sbjct: 7 LIPMIEANLPNMAYAEKDIAKFFLKQQP-LNDYSSKALCEYLNVSKATLTRFAKKCGFKG 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F E + + + EK++ + + T V E +L Sbjct: 66 FRQFIFKYQEMIHEKEKLAL------------YTEATEKVLSDYEEMLRKTYTVLDEVQL 113 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 M+ +A R+ L G G+S L Q + M++G + D +L + + + L Sbjct: 114 ERIAEMIETAERVYLYGKGSSVLALQEMKMRFMRLGVIGEVLSDEDMILWSSLLLNENCL 173 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ S +G + + G K + +T + L + + + I Sbjct: 174 VIGASISGQTDIVLEGLQKAADKGAKTVLMTTRKFDEEDCFFDELLLLASTDHLSYGNRI 233 Query: 243 SACHAQGMLTDLLFIALIQ 261 S ++TD LF ++ Sbjct: 234 SPQFPILLITDCLFSNYLE 252 >UniRef50_B2SAV7 SIS domain protein n=40 Tax=Alphaproteobacteria RepID=B2SAV7_BRUA1 Length = 286 Score = 140 bits (352), Expect = 7e-32, Method: Composition-based stats. Identities = 55/262 (20%), Positives = 100/262 (38%), Gaps = 6/262 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R+ + L + K+ ADY+ D + ++A AGV S+ ++F Q LG+ G Sbjct: 27 FEARLLEVADRLPKRLKQCADYVAANQDRIAVSTVAEMAEGAGVQSSAFMRFCQILGFSG 86 Query: 63 FPALKLALSEALASQPESPSVP-IHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F ++ E A S +H + + + + ++ L E Sbjct: 87 FSEMQRLFRETYAGGWPDYSTRLLHLRETAAGRAPALLAEFAEAGRTSLEGLLKTIEPEA 146 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + V +L SA I + GI + VA A+ L K+ A + L + A D Sbjct: 147 LEKAVELLASANTIHIIGIRRAFPVASYLAYALEKMAVPAMLHSAVGKL-ENLHAIHKGD 205 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +LLAI+++ E + + G V+ IT + + + A L + + Sbjct: 206 VLLAITFSPYSPETIGMTEAVAARGIDVIGITDTIVSPMSKVARQTLLVS----EVDFGA 261 Query: 242 ISACHAQGMLTDLLFIALIQQD 263 + A L + +A+ Sbjct: 262 FRSLSATLCLAIAIAVAVGTAR 283 >UniRef50_P54717 HTH-type transcriptional regulator glvR n=4 Tax=Bacillus subtilis group RepID=GLVR_BACSU Length = 254 Score = 140 bits (352), Expect = 7e-32, Method: Composition-based stats. Identities = 57/272 (20%), Positives = 101/272 (37%), Gaps = 23/272 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I Q Y L +D + Y+L T HL LA VS+SS+++ AQKLG+ Sbjct: 1 MQLEELINQHYSKLNDNDFHILKYILNHKHTCYHLGIDALAKACSVSRSSILRLAQKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ ++ L + ++ + A L + Sbjct: 61 SGYSEFRVFLKWEDQPEEGESMS-------------------FEKLLDDIEANLKFLRTK 101 Query: 121 KLHECVTMLRSARRIILTGIGASG-LVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + + ++ +A RI + G G + + A++ + + D + Sbjct: 102 DMTDMCQLIDAADRIFVYGSGNAQKICARDLQRMFIPRHRYLILIEDTNEFNLMRDDFKV 161 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +DL + IS +G EL A + G ++IT N L Q H LY ++ + Sbjct: 162 NDLFIIISLSGETPELIPQARMLSAKGIPFISITNLKNNVLAQLTPHNLYATSKPVTLSD 221 Query: 240 -ASISACHAQGMLTDLLFIALIQQDLELAPER 270 I A ++ + LF A + D + A + Sbjct: 222 RTEIVAFAPFFLVGEALFRAYV--DYKEAEKN 251 >UniRef50_D0J1V5 Transcriptional regulator, RpiR family n=2 Tax=Comamonas testosteroni RepID=D0J1V5_COMTE Length = 291 Score = 140 bits (352), Expect = 7e-32, Method: Composition-based stats. Identities = 49/286 (17%), Positives = 106/286 (37%), Gaps = 14/286 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + R+R L S+++LA++LL P ++ ++A GVS ++V +F Q+LGY+ Sbjct: 15 SFIARVRAALPQLPPSERRLAEFLLDFPGNLSSYAAAEMAKLTGVSNATVTRFIQRLGYE 74 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ + + Q R V +++ + + T+ S ++ Sbjct: 75 GYEDARRHARAQGDNGSPLFLAAASAQGRP---TADVIATHLRQASENLAVTIGQISAQQ 131 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFA-WKLMKIGFNAAAVRDMHA-LLATVQASSP 179 L + L AR++ G + A L + + + L Sbjct: 132 LEDIALALIGARQLFFVGYRQNRNFAAYLRWQLLQALEMPSQVIPGAGETLGEYAAQIGE 191 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +D+++ + R ++ A + +G +++ IT + A L Sbjct: 192 NDVVVIFALRRSVRVVSEFARQARLLGARLICITDHA-SP-APEADWLLRVQTSAP---- 245 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE---ALVKKLV 282 + A ML L+ A +QQ + + E + +++ Sbjct: 246 GPLDNHTALFMLCHLIATATLQQSGQPGRRHMAAIETSHDALDEML 291 >UniRef50_B8H4I3 Transcriptional regulator IolR n=2 Tax=Caulobacter vibrioides RepID=B8H4I3_CAUCN Length = 291 Score = 139 bits (351), Expect = 9e-32, Method: Composition-based stats. Identities = 55/275 (20%), Positives = 105/275 (38%), Gaps = 11/275 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 I +RY L++ +++A Y+L +P+ + ++ GV S++V+FA+ GY G Sbjct: 17 LRSAILERYDSLSKRLQQIARYVLDEPNELALETLAVISERCGVQPSAIVRFAKTFGYPG 76 Query: 63 FPALKLALS------EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNV 116 ++ A E V + ++ NT A+ Sbjct: 77 ASQMQRLFRDGLLSGHAGLGYSERVRHFNEAVAMTPQGGADVLAEFVEGNTLALQNLGQT 136 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQ 175 S + + V+++ A + + G S VA A+ L + + + VQ Sbjct: 137 VSAADMAKAVSLIDKAETVYVAGFRRSFPVASYLAYSLQQANKRTLFIDGVAGLTKQQVQ 196 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 P DLL+A+SY E +AA+ + G K+L+I+ + + + A L+ E Sbjct: 197 TIGPKDLLIAVSYHPYAEETVMAAEMATQRGAKILSISDSLVSPIAKPAELVLHVRESE- 255 Query: 236 ATNSASISACHAQGMLTDLLFIALIQQDLELAPER 270 + + A L L I + + + Sbjct: 256 ---VRTFRSLAASICLAQALVIGFAFEAGKEERKA 287 >UniRef50_C0VS80 RpiR family transcriptional regulator n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VS80_9CORY Length = 295 Score = 139 bits (351), Expect = 9e-32, Method: Composition-based stats. Identities = 40/284 (14%), Positives = 97/284 (34%), Gaps = 12/284 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R++ + + ++ LADY + + S ++V +F +KLGY+ Sbjct: 13 LFERVQ-KISDMTPMERNLADYFTDAYPELAFKNLVDICEATQSSTATVTRFVRKLGYQN 71 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F L + ++S +SP + + + + T + E+ Sbjct: 72 FRDFSKQLRKEISSNFDSPLQRNSEIDDDPQSPGTLLFQHLARAQEDLQQTSRIVDCEEF 131 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF----NAAAVRDMHALLATVQASS 178 ++ A R + S ++ +G N + + + + + Sbjct: 132 ELIADLISDADRSLFL---NSSATGKDLLHYFYLLGKYHRPNLFFLPGIDMVPHELVDGN 188 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D +LL ++ ++ +GG+ + IT L++ + H L + Sbjct: 189 KDSILLTTNFDRHPIQVQSVMRAFKEMGGETILITNRQAGVLRRYSDHVLLVPSSSDF-- 246 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 + + ++ + L A+ + + R + E L++ V Sbjct: 247 --RFKSRSSMLVVLESLLAAMESRYPDRVKARTKKMEGLMEDFV 288 >UniRef50_UPI000196B86F hypothetical protein CATMIT_00765 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B86F Length = 281 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 49/255 (19%), Positives = 96/255 (37%), Gaps = 2/255 (0%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 + +++K++ DYL+ D LS LA + S +++++ +K GY G+ ALK+ Sbjct: 25 SQENKYTETEKEVIDYLMNHLDLLEELSINDLAKKTYTSNATIIRLCRKTGYSGYKALKV 84 Query: 69 ALSEALA-SQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 L + ++ SV + ++ + + + ++ + + L Sbjct: 85 DLIKEREANKYIVESVDYTTPFQFNETTEEIMKNMFSLYQESIKQVYSSLDIDVLKSIAH 144 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAIS 187 + +RI L G + NF KL+K+ + + DD L IS Sbjct: 145 EIIHKKRIFLFSYGDTQTTVINFTNKLVKVNIFPTLATQFGEERHISKRMNKDDYALIIS 204 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHA 247 Y G R L + R K+ IT N+L + E+ ++ + A Sbjct: 205 YRGQER-LLECVQTLSRNHVKIGLITANKKNSLMAYCDDLIMIPDCEKENRISTFYSQLA 263 Query: 248 QGMLTDLLFIALIQQ 262 + L+ + Q Sbjct: 264 FQYVLSNLYAIIYHQ 278 >UniRef50_Q6M5C3 Transcriptional regulator, rpiR family n=3 Tax=Corynebacterium glutamicum RepID=Q6M5C3_CORGL Length = 293 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 116/256 (45%), Gaps = 3/256 (1%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 RI L + +K+A+ +L+ + L++Q LA+ GV +++V++ AQ LGY GFP Sbjct: 16 RITTLAPSLQPNQRKVAEVMLVDAPSIVELTAQGLADRVGVGRATVIRTAQSLGYDGFPQ 75 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 L++AL++ LA + + + L + I + A++ + +E+ L C Sbjct: 76 LRVALAQELALAQGASRSMVEGALS--SSLLGHLQAGISDFQASLGTVASALTEDDLTRC 133 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 + L SARR+++ G S + +F+ +L +G +A D + + + A Sbjct: 134 IEGLDSARRVLVASHGLSAPLGLDFSQRLNSMGRSAEVHSDSMSEQIVARQLGEGSVCFA 193 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI-SA 244 IS +G + + G ++A+T F +A+ A L + ++ Sbjct: 194 ISGSGASKATLATIEAARAGGATIMAMTCFAHSAIDVAADVSLIVPPMTASFQDELTRTS 253 Query: 245 CHAQGMLTDLLFIALI 260 A ++++ L LI Sbjct: 254 RAALMLVSEQLIELLI 269 >UniRef50_A4AG13 Putative uncharacterized protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AG13_9ACTN Length = 302 Score = 139 bits (350), Expect = 1e-31, Method: Composition-based stats. Identities = 48/284 (16%), Positives = 110/284 (38%), Gaps = 10/284 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 ++++ ++ L+ ++++++ L+ A +LA A VS +V++ KLG Sbjct: 7 LAEQLKKEHESLSPAERRVSRVLIADYPVAGLEPVHRLAERANVSAPTVLRLISKLGIGS 66 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAA----MYATLNVNS 118 +P ++ L + ++ + SP + P G K + ++ + AT N Sbjct: 67 YPQMQKLLRQEISVRTSSPLEMYGERSASTTPGTQSGIKFVADSKRVLAEGLDATFNAIP 126 Query: 119 EEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLAT-VQA 176 E ++ E ++ + R RI G S L+AQ L + + V A + Sbjct: 127 ETEIIEIAKLIANPRNRIWTVGGRFSDLLAQYLTLHLRLLRKDVNHVDPTEQEKAFTLLD 186 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 + D+L+A Y + + T + + A + L + + Sbjct: 187 FTSRDVLIAFDYRRYQGGTVSFLKNAKNKKATTVLFTDPWLSPAAKHADYLLSSSVTSPS 246 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + L + + ++++ + +RI+ +AL +K Sbjct: 247 ----PFDSLTSGFALVETVIAGVVEELGDSPTQRIQAFDALQEK 286 >UniRef50_Q723C8 Phosphosugar-binding transcriptional regulator, RpiR family n=18 Tax=Listeria RepID=Q723C8_LISMF Length = 250 Score = 139 bits (350), Expect = 1e-31, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 94/249 (37%), Gaps = 18/249 (7%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L ++ + +Y++ D ++ + LA EA VS +++++F +K G GF ++ L Sbjct: 9 ELNDTELDIYNYIVANLDKVVYMRIRDLATEAHVSTTTILRFCRKFGCNGFSEFRVKLQL 68 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 L Q + + T + ++ V +LR Sbjct: 69 YLEEQKLAQIDMADET----------------TYIDFLKRTAQPEFKAQIQNAVEILRDR 112 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD--MHALLATVQASSPDDLLLAISYTG 190 ++ G+G+SG++A+ A + A + D H S ++AIS G Sbjct: 113 ELVLFAGVGSSGVIAEYGAIYFSSLFTLALHIEDPLNHPFYHLSSKLSDKICMIAISVEG 172 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGM 250 ++ ++ KV++IT + + + + + ++ A+I++ Sbjct: 173 ENEDIIRYIHQLKAQNCKVISITNSAKSTIARLSDANIAYYINKEMYQEANITSQLPALY 232 Query: 251 LTDLLFIAL 259 + + + Sbjct: 233 TIENIAREI 241 >UniRef50_B2V3J3 Transcriptional regulator, RpiR family n=2 Tax=Clostridium botulinum E RepID=B2V3J3_CLOBA Length = 252 Score = 138 bits (349), Expect = 1e-31, Method: Composition-based stats. Identities = 48/267 (17%), Positives = 101/267 (37%), Gaps = 20/267 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I Y L Q+D ++ +Y+ + + ++ +Q+AN+ VS++++++F +KL Sbjct: 1 MKIYELINNNYDKLTQNDHEIFNYISNNQEQCKDMTCEQVANKCHVSRTTLLRFCRKLNL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F LK L +D + ++ + T++ Sbjct: 61 NSFAELKYLLK-------------SSACKVYEDSSLDI-----EKACQTYHKTIDEIKGH 102 Query: 121 KLHECVTMLRSARRIILTGIGASGLV-AQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + +++ +A I + G G + A+ F + G + D+ + + Sbjct: 103 EYKNICSLIYNAETIYIYGTGNAQKAEAEEFKRIFLSAGKCVVDLFDLGEVQLIQNKFTG 162 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE-QATN 238 DL + IS +G E + ++IT F N + + LY + Sbjct: 163 KDLFVIISLSGETIEGIEILKSIESRKINTMSITRFQNNTIARMCKDNLYVSTKMLHGFK 222 Query: 239 SASISACHAQGMLTDLLFIALIQQDLE 265 + S A +L D+LF+ ++ E Sbjct: 223 NLSYEMTAAFYVLLDILFVYYLEYIRE 249 >UniRef50_B5XW96 SIS domain protein n=11 Tax=Enterobacteriaceae RepID=B5XW96_KLEP3 Length = 300 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 43/276 (15%), Positives = 101/276 (36%), Gaps = 4/276 (1%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 R R R L+ + + Y+ + ++ ++A S ++VV+ Q LG+ G Sbjct: 17 ERYRARAHQLSPRLRAVVSYINDNREVVLEHTAMEIATATQTSDATVVRAIQALGFAGLR 76 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 LK + + S + + +++ + ++ + + Sbjct: 77 ELKQTMERWFGTSVTSAKKMRSTVTALSSDVNSSIDFVLEGHQRVCEVLSRADNRAAVAQ 136 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSPDDLL 183 V +L AR++ + GIGASG++A+ A +IG A + L + D+L Sbjct: 137 AVALLSDARQVGIFGIGASGILAEYTARLFSRIGLPAYVMNRTGFSLAEQLIGLQRGDVL 196 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + + RE E R+G + +T + Q A + ++ + Sbjct: 197 IMMGQKSPHREGMTTLREAKRLGIPTILLTQAVDSRFSQEAQVVIDVPRGGDSSRM-PLH 255 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + +++ +++ + + ++ L + Sbjct: 256 GTV--LVCLEMIVLSVASTTPQKTVKSLKRINDLHR 289 >UniRef50_B0N0Q7 Putative uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N0Q7_9FIRM Length = 296 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 118/283 (41%), Gaps = 5/283 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + +I + + + D++L + + + ++A + S+++VV+FA+ LG+ Sbjct: 1 MFLIQKIEELMVNHPDARYAVGDFVLHEQKNLHNYTINEVAEHSYTSKATVVRFAKTLGF 60 Query: 61 KGFPAL-KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 +G+ K+ +SE + V + D + + + K ++ T ++ Sbjct: 61 EGWREFMKVFISEMKYLEQHQGDVDANYPFTEDSSVDEIINNIKKVQIESIQDTADLIET 120 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L + L A+ I++ G+ + + + F K++ IG + + + + + Sbjct: 121 DMLEMATSYLLKAKHIVIFGLSPNIFLGELFRRKMITIGK-SIDIAKLGEMGIISRTLGS 179 Query: 180 DDLLLAISYTGVRR--ELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 DD + ISY+G E +L V+ IT N L+++ S L ++E+ Sbjct: 180 DDCAIMISYSGNNEKGEPMRYLPVLLDNQVPVIGITSGGDNYLRKKLSCVLTISSKERLY 239 Query: 238 -NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 ++ + + + + LF +D + H +++ Sbjct: 240 TKISNFATEESIHFILNCLFSCYFARDFQNNNHFKLHHSKVLE 282 >UniRef50_A9BRR5 Transcriptional regulator, RpiR family n=2 Tax=cellular organisms RepID=A9BRR5_DELAS Length = 299 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 105/279 (37%), Gaps = 11/279 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +R+ ++ L++ K + ++ +Q D Q A + GV S+VV+FA+ G+ G Sbjct: 25 FLTVLREGFEALSRQLKAIGRHVEMQGDRLAFDGIQATAEQCGVQPSAVVRFAKHFGFSG 84 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRL------VGEKLIKENTAAMYATLNV 116 + L+ A Q + + ++I+ + ++ A Sbjct: 85 YSELQALFRADAARQLSAQHDYQDRIRGLIASGNEPRSSARLAHEVIEGSIESLQALQRG 144 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQ 175 E+ V ++ A + L + V A+ L + + ++ Sbjct: 145 LPPEQFEAAVDLMLDAPSLWLAASRRAFPVGAYLAYALQHTEKPVHWLHGLGAMQKGELR 204 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 A +P D++LA+S+ E D L G ++LA+T + L RA+ L Q Sbjct: 205 ALAPGDVMLAVSFEPYAPETLEVVDAALARGARLLALTDSQLSPLASRATVTLLA----Q 260 Query: 236 ATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 + + + L LF+AL + ++ S Sbjct: 261 DAATFGFRSLTSTLTLAQSLFLALAYRMELAYEPSVKRS 299 >UniRef50_A3VFQ4 Putative transcriptional regulator protein n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VFQ4_9RHOB Length = 279 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 51/277 (18%), Positives = 97/277 (35%), Gaps = 6/277 (2%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 + Y L+ ++ DY+ P S + +A+ +G++ ++ + ++ LGY+ F L Sbjct: 1 MASNYDALSARLREAGDYIAANPLDTATRSLRAVADHSGLAPATFTRLSKALGYENFEEL 60 Query: 67 KLALSEALASQPESPSVPIHNQIRGDD-PLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 + + L + S + D + + + + + + K Sbjct: 61 REGMRRRLERRQASFAARADALQGASDGGSADLIRRTREASLTNIDRLTDEIDTAKFDTI 120 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATV-QASSPDDLLL 184 L +ARR++L G S +A+ A+ +G N M A + D L+ Sbjct: 121 ADHLHAARRVVLLGGLGSTAIAEYAAYMGNFLGDNWMPAGRMGASVGAALSDLDRRDALI 180 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 + AA+ G VL +T + AS + E S+ Sbjct: 181 VFTKPPFANTSIRAAEFARARGVYVLVVTDTHTCPALRHASARVVVPTESPNF----FSS 236 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 A + L + Q+ A ERI E + L Sbjct: 237 YVATMFFVETLMAMIAQRAGPTATERIADVETANRAL 273 >UniRef50_D1P280 Transcriptional regulator n=5 Tax=Enterobacteriaceae RepID=D1P280_9ENTR Length = 250 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 54/251 (21%), Positives = 109/251 (43%), Gaps = 14/251 (5%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 + Y L S+KK+ YL +L+ +L + VS++ ++ +QKLG+ GF LK Sbjct: 6 KNYDNLTVSEKKVLKYLTDNIADIPYLNINELVAKTFVSKTVIINLSQKLGFSGFKELKF 65 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 ++ + SQ ++ + + + ++ T + +EE++H+C Sbjct: 66 QINNHILSQNKAEKKNPASYKKQLE--------------NNIHKTFTLINEEQIHDCAKT 111 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 LR +R I + G S V L +G + + D + + + + DD ++ IS Sbjct: 112 LRHSRNIFIVARGTSKAVGYYLEHLLFSLGLHCFFINDYNLSDSFTRLVNKDDTVIFISL 171 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 +G +++ A + ++++T F N L +++ L+ A+ T + Sbjct: 172 SGGTKKIIETAKIVQLKDANIISMTAFHTNELTAYSTNSLFCFADSYDTKRDDSKSRTGF 231 Query: 249 GMLTDLLFIAL 259 +L DLL L Sbjct: 232 FILVDLLINEL 242 >UniRef50_A7G380 Transcriptional regulator, RpiR family n=1 Tax=Clostridium botulinum A str. Hall RepID=A7G380_CLOBH Length = 179 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 54/176 (30%), Positives = 93/176 (52%) Query: 106 NTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR 165 + T + +EKL E V +++A I L G+GAS +VA +F +KL++I + Sbjct: 1 MIDTINDTKELVDDEKLLEAVKAIKNAETIYLYGVGASAMVAMDFQYKLLRINKKVMFQQ 60 Query: 166 DMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRAS 225 D H LA + D+ +AISY+G RE+NLA +E + G +AIT + L A Sbjct: 61 DSHLQLAVSVHITNRDVAVAISYSGNTREVNLAVEEAKKNGATTIAITKCGKSILSNIAD 120 Query: 226 HCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 L + E+ +IS+ +Q +TD LF+ + +++L+ + + ++ LV+ L Sbjct: 121 INLNIPSIEKDLRIGAISSRTSQLFVTDSLFLGIAKENLDKTEKNLINTRNLVEVL 176 >UniRef50_C2HQZ9 Transcriptional regulator n=2 Tax=Lactobacillus acidophilus RepID=C2HQZ9_LACAC Length = 277 Score = 138 bits (348), Expect = 2e-31, Method: Composition-based stats. Identities = 66/269 (24%), Positives = 109/269 (40%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 Q L S+K++A YLL Q LS+Q+L S+ +V++F +KLGYK F Sbjct: 7 QNETNLTNSEKEIARYLLNQNLDLATLSAQKLGELTFTSKPTVLRFIKKLGYKKFNEFCY 66 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L +S + H I D L + K+ A+ T ++ +E L+ V Sbjct: 67 DLISEQERIKKSRDLLKHININKDSNLSDLLIKVPNLYNQAINRTNSLMDQENLNLIVKK 126 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 L + I G G + +AQ ++K IG +++ T + IS+ Sbjct: 127 LNTLDYIDFYGSGITEGLAQIGSFKFSSIGKFGGVYSNVNEHYLTSIHGINKHGAIIISF 186 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 TG + + AA ++ ++ L I G L+ S L E + SI A Sbjct: 187 TGGNKAMINAAKDLKKLNIYSLGIGGLENEELKNNCSSYLTIPFENLSLGMESIVPSVAI 246 Query: 249 GMLTDLLFIALIQQDLELAPERIRHSEAL 277 + D+LF +L ++L + L Sbjct: 247 NYVIDILFTSLTIKNLSQNVTNALKVKNL 275 >UniRef50_Q16A62 Transcriptional regulator, RpiR family, putative n=4 Tax=Rhodobacteraceae RepID=Q16A62_ROSDO Length = 285 Score = 138 bits (348), Expect = 2e-31, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 98/280 (35%), Gaps = 10/280 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M +I Q + ++KLA +L A S Q LA + VS S+ +F K+G Sbjct: 4 MQIRYKIEQASDTFTKGERKLAAAILSDYPYAGLSSIQDLAKRSEVSAPSISRFMTKIGL 63 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ AL L SP + + + +A M + +EE Sbjct: 64 SGYQEFHRALIAELKDGDRSPVEMHVGDRHIEGDY---LSDFLAKASAQMAIAGDAITEE 120 Query: 121 KLHECVTMLRSARR-IILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASS 178 + + +L + + I + G S +A + ++ L + + D + Sbjct: 121 QFNRVCALLANPKHSIYVIGGRISDTIAAHLSFHLRQARRGVYHLPSDPETWPEYLLRMK 180 Query: 179 PDDLLLAISYTGVRRELNLAADEML-RVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 D+ + + ++ L A G +V+ +T + + + AS L E Sbjct: 181 GGDIFFVVDFRRYQKALASLAGLARNERGARVVVMTDKWISPVARHASDVLPVPIESGTL 240 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + +T+ + + + + +RI + L Sbjct: 241 WD----TYSSALAITEAIVTRIAEDNWAHTKDRIESWDKL 276 >UniRef50_B5J441 SIS domain protein n=1 Tax=Octadecabacter antarcticus 307 RepID=B5J441_9RHOB Length = 292 Score = 138 bits (348), Expect = 2e-31, Method: Composition-based stats. Identities = 52/268 (19%), Positives = 106/268 (39%), Gaps = 10/268 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I RY G++++ +++A YL P+ S +A + SS V+FAQ LGY Sbjct: 12 SLIRLIHDRYDGMSKTRQQIAVYLTQNPNDVAVRSVNAIAQNCDIHASSFVRFAQSLGYD 71 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDD-----PLRLVGEKLIKENTAAMYATLNV 116 GF +L+ + LA+ ++ + + ++ + A++ + L+ Sbjct: 72 GFRSLQALFQQRLATAAPGFEARVYALKQELKSRDGLSEADLLRDMVVSDAASVQSLLDE 131 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQ 175 L + +L A + L G S V + + L +G + + Sbjct: 132 IDANDLAKAAEILGDAETVFLLGQLRSAPVVELIRYLLTMVGKKCIMLDPSGGLATHIAR 191 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 P D LLA+S+ E+ +E+ G K++A++ + + L + A L Sbjct: 192 TIGPKDALLAVSFRFYANEVVSIVEEVAAQGRKIVALSDSSLSPLAKSAHVLLAAHEHPG 251 Query: 236 ATNSASISACHAQGMLTDLLFIALIQQD 263 + + A L + +A+ + Sbjct: 252 PLS----RSITAPICLAQAITLAVASRM 275 >UniRef50_A3V1X8 Transcriptional regulator, RpiR family n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V1X8_9RHOB Length = 289 Score = 138 bits (348), Expect = 2e-31, Method: Composition-based stats. Identities = 45/282 (15%), Positives = 103/282 (36%), Gaps = 7/282 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 ++R + +++++LA ++L + + +A +AGVS +VV+F +K+G+ G Sbjct: 7 LEDQLRAAMPTMTRAERQLASHMLGNFPLSVLGTVATIAQDAGVSAPTVVRFVRKIGFSG 66 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 +P + L E + + SP + + + + TL+ Sbjct: 67 YPEFRAQLHEEMGERLASPITKHEKWADRLE-IDHPLNRFALRVIENLRQTLSQQDLRTF 125 Query: 123 HECVTML-RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASSPD 180 +L +R + L G + +A+ F L + + + + + S Sbjct: 126 DAVRDLLADKSRSVYLIGGRLTRSIAEYFTTALHVMRSDVTLLSSQPNTWPPALLDMSAG 185 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L+ + A+ +V+ T + A H L + E + Sbjct: 186 DVLVVFDIRRYEPSVQQFAELAHAQQMEVVLFTDQWVSPTAGVARHILTSQIEVPS---- 241 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 + L + + AL + + ER+ E ++++ Sbjct: 242 AWDTIVPLIALVESMLSALQDANWQDTRERLERMERFYEEML 283 >UniRef50_A6DXB0 SIS domain protein n=1 Tax=Roseovarius sp. TM1035 RepID=A6DXB0_9RHOB Length = 284 Score = 138 bits (348), Expect = 2e-31, Method: Composition-based stats. Identities = 44/279 (15%), Positives = 90/279 (32%), Gaps = 7/279 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M ++ Q L + A Y+L P+ S + +A GV+ ++ + AQ +GY Sbjct: 1 MKIDEKLTQALPNLPRKLAVAARYVLDNPERIAVDSMRSVAQACGVAAPTMQRLAQHMGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +G+ + + L + V D L + + + + + Sbjct: 61 EGYDGFRQDFQKLLMGRGFGARVDALRSTFQSDSLAKLVSHMTEAAQNNIAEVAAHLEPK 120 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFN--AAAVRDMHALLATVQASS 178 ++ V +R + R + G G+ A ++ + A + S Sbjct: 121 EVGAFVAAVRRSGRTYVIGAGSMYWAAGMIEAT-GRLAVPDLVSLPAGTVAASERISTIS 179 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D +LA+ + A R V AIT + L A Sbjct: 180 SSDTVLALGIAPYCAQTIDAMQYARRASASVYAITDRPSSPLAPYADGLFLAPTASPHY- 238 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + A ++ ++L A + + R+R + + Sbjct: 239 ---FPSAIAVQLVAEILLAACAAASGDASRHRLRQLDEI 274 >UniRef50_C5SGA6 Transcriptional regulator, RpiR family n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SGA6_9CAUL Length = 292 Score = 138 bits (347), Expect = 2e-31, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 106/268 (39%), Gaps = 11/268 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 I ++Y ++ K++A ++L +P+ + +A A V S++V+FA+ LGY G Sbjct: 25 LRTAIMRQYDDASRRMKQVASFVLDKPEDVAFETLAVVAERADVQPSTLVRFAKTLGYAG 84 Query: 63 FPALKLALSEALASQP------ESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNV 116 ++ + + L S E ++ G++ L + ++ + + A+ Sbjct: 85 ASQMQKVIRDELLSSHISLAYGERARAFGASEAIGEEGLSTILDEFAEADILALNHLRQS 144 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLA-TVQ 175 S +++ V + +A + + G + VA A+ L + G + L + Sbjct: 145 VSADQIRTSVEAIIAAENVYIAGFRRAFPVASYLAYALQRAGKRVVFLDGAGGLWEQQAR 204 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 +DLL+AIS+ E L G +VL+IT + L + L E Sbjct: 205 GIRAEDLLIAISFRPYAEETVRCHALALERGAQVLSITDSNVSPLVKPGHQSLLLRESE- 263 Query: 236 ATNSASISACHAQGMLTDLLFIALIQQD 263 + + A L L +A + Sbjct: 264 ---VRAFRSLTAPLCLAQSLVVAYAFAN 288 >UniRef50_C6VQQ2 Transcription regulator n=4 Tax=Firmicutes RepID=C6VQQ2_LACPJ Length = 237 Score = 138 bits (347), Expect = 2e-31, Method: Composition-based stats. Identities = 51/252 (20%), Positives = 101/252 (40%), Gaps = 20/252 (7%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 ++ + ++D ++ Y++ D ++S ++LA+E VS S++++F K G++G+ K Sbjct: 5 EQLEKYNETDVEIYRYVINNMDRVGYMSIRELAHELHVSTSTILRFCLKNGFEGYRDFKR 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 AL + E T + E KL +T Sbjct: 65 ALKSEQQQLTTYEPKSD-----------------VSELAHFFAKTNSSAYERKLMPALTY 107 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 LR A +I GIG+SG +++ A G A + D + + + D ++ A+S Sbjct: 108 LRRATLVIFVGIGSSGSLSRYAARCFTNAGKVAFGLEDSNYPVNAFEIH--DTVVFALSE 165 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI-AEEQATNSASISACHA 247 +G EL + VL+IT + + L + + A ++ + +I+ Sbjct: 166 SGETPELIALVQYFQQRRCAVLSITNQSQSTLAKLSDWNFSYQLAHQRINGNYNITTQVP 225 Query: 248 QGMLTDLLFIAL 259 + + L L Sbjct: 226 VVYVIETLAKRL 237 >UniRef50_A7FLM3 Transcriptional regulator, RpiR family n=47 Tax=Enterobacteriaceae RepID=A7FLM3_YERP3 Length = 314 Score = 138 bits (347), Expect = 3e-31, Method: Composition-based stats. Identities = 56/283 (19%), Positives = 112/283 (39%), Gaps = 12/283 (4%) Query: 1 MN-GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M R+R Y L ++++AD++ D +S +LA +GVS+++V + ++LG Sbjct: 38 MKQIDERLRGHYTQLTPQEQRVADFIFAHFDDLISYNSAELARLSGVSKATVSRLFKRLG 97 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 Y + ++ + S Q + + K+ A + +N Sbjct: 98 YGSYREMREEVRALRQSGMPLTDNRDAVQGN------TLLARHYKQEMANLAHWVNQLDS 151 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQASS 178 ++L + + + A RI+L G+ S VA + +L+++ + L + + Sbjct: 152 QQLTDVIDAMAQAPRILLLGLRNSYPVALHLRQQLLQVRQQVHVIPQAGQTLAEELVDIT 211 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P DL++ +++ + + M G L I +L A L T + Sbjct: 212 PHDLVIVVAFRRRPKAIREILLHMQGQGVPTLLICEPQAQSLLSLARWRLTTP----LDS 267 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++ + A L +LL AL+ + L +RI L L Sbjct: 268 VSAFDSYSAAMSLVNLLSNALLHKILAEGRQRIHQIANLYDSL 310 >UniRef50_C5F607 Predicted protein n=1 Tax=Lactobacillus paracasei subsp. paracasei 8700:2 RepID=C5F607_LACPA Length = 269 Score = 138 bits (347), Expect = 3e-31, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 102/279 (36%), Gaps = 19/279 (6%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I ++ +AD+ ++ +L+ VS+SS+ +F +K+G Sbjct: 10 DIFILIESCRLNFTSVEQVIADH---HLSKRPAMTIDKLSEHLAVSKSSITRFCKKIGLD 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + L +L ++ + S K+ + + + S+ Sbjct: 67 NYKELIFLYKLSLNNETANLSASS---------------KITAAYHSLATRSDSNYSQAV 111 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + +L + + G G + +F +K ++G + D +++L + ++ D+ Sbjct: 112 IDAFCELLHQHKIVHFFGKGFNSYAGSDFQFKFSRVGKYIRVITDENSILMSANFANKDE 171 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++ S G EL A + +L IT + L A L + + + Sbjct: 172 LIVVASLRGDDEELLEAMKIAKKRRVPILLITSNRYSQLIPHADVTLLAASLTKEEALGN 231 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 IS + D+++ I A R SE ++ K Sbjct: 232 ISPQIPILIQLDIVYERYI-HLYADAIARWLTSEQILHK 269 >UniRef50_A8GCW7 Transcriptional regulator, RpiR family n=1 Tax=Serratia proteamaculans 568 RepID=A8GCW7_SERP5 Length = 380 Score = 137 bits (346), Expect = 3e-31, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 95/233 (40%), Gaps = 6/233 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + +IR R L+Q + K+A +L A + + LA++AGVS +++ +FA+ +G Sbjct: 126 DIVYQIRARQNQLSQQEAKVAQTILDDIAFASSATIELLASQAGVSPATITRFAKTIGCD 185 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 L++ L++ S S + Q + P RL +++ T Sbjct: 186 DIRDLRMKLAQ----ASVSGSRYLTAQTTPNGPPRLWLQRVNDVETTLHQQL-QQVEHSA 240 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + + + + + G+ + GL +L+ +G+ A A +D + T S Sbjct: 241 LIDASQQVSQCKSVHIFGVNSMGLYVNELQQRLVGLGYPAFACQDAALMRMTASTLSTQQ 300 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE 234 ++ +S +G +L AA G +A+ + L A L Sbjct: 301 CVILLSLSGENTDLLNAARLAGATGAYRIAL-APAGSTLASLADKVLPLSGGS 352 Score = 61.1 bits (147), Expect = 4e-08, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 31/80 (38%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + I+ R + + K+A +L P + +QLA AGVS V FAQ LG Sbjct: 1 MDLVYHIQFRQDPFNRQEAKIARTILDNPGFTSTATIEQLAERAGVSTEIVAHFAQSLGC 60 Query: 61 KGFPALKLALSEALASQPES 80 + + Sbjct: 61 QDLNDFISLMRTQPVPVNPP 80 >UniRef50_B5RKH7 Transcriptional regulator, RpiR family n=2 Tax=Proteobacteria RepID=B5RKH7_KLEP3 Length = 294 Score = 137 bits (346), Expect = 4e-31, Method: Composition-based stats. Identities = 69/264 (26%), Positives = 115/264 (43%), Gaps = 3/264 (1%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I R LA S+ K+ D LL+ P ++ Q+A AGVS +V++ A+ +G+ GF L Sbjct: 23 IHARSGDLAASEAKVVDLLLVDPLFVGTSTAAQVATRAGVSPPTVIRAARAIGFTGFTEL 82 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 K+ ++ A + + + D L V E I+ A+ A L E V Sbjct: 83 KIEIARARGTAQFFAPPEV---LTADATLASVLETSIRAGVDALTALSGAIEISALDEAV 139 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 ++RSAR++ G G S VA + ++L G +++D + + + P D+++ + Sbjct: 140 DLIRSARQVFAFGAGPSATVAADAVFRLRTAGVITVSIQDYLSAMIAARLLGPGDVIIVV 199 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S TG AD G ++AIT L A+ L A+ + Sbjct: 200 SSTGRTSSTLSIADAASSAGASLIAITNQYDTPLATLANVSLVVGGMPLPAQMAAAGSRL 259 Query: 247 AQGMLTDLLFIALIQQDLELAPER 270 AQ ++ D L AL +D E + Sbjct: 260 AQLVVIDTLVAALTLRDKEQSRRA 283 >UniRef50_A6UKE0 Transcriptional regulator, RpiR family n=4 Tax=Alphaproteobacteria RepID=A6UKE0_SINMW Length = 299 Score = 137 bits (346), Expect = 4e-31, Method: Composition-based stats. Identities = 56/274 (20%), Positives = 101/274 (36%), Gaps = 9/274 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RIR+ L S++K+A+ +L + Q+LA + GVS S+ +F K+G G Sbjct: 9 IRTRIREAAAQLTASERKIANAILADYPFTGLENIQELAAKTGVSAPSITRFVNKIGCGG 68 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F L+ L L SP +Q + + +A M + S+ + Sbjct: 69 FQDLQRQLIAELKEGRRSPLDLKSSQKPVGHS--DFLSEYVARVSAVMREMTGMVSQAQF 126 Query: 123 HECVTMLRS-ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASSPD 180 + +R I L G S +A + L +I + D V Sbjct: 127 DILAELFADPSRNIFLLGGRVSDSIASFLSIHLRQIRSGIYHMADNPEFWPEHVLRMRRK 186 Query: 181 DLLLAISYTGVRRELNL-AADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D++L I + + L AA+ + G ++ +T + + A H + E Sbjct: 187 DVVLLIDFRRYQLSLARLAANIAEKRGATIVVVTDKWMSPAARSADHIVALPIE----AG 242 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRH 273 + A L + L + + + D +RI+ Sbjct: 243 TAWDTVAAAMALVEALIVRVSEADWGATQKRIKD 276 >UniRef50_C3RLZ3 Transcriptional regulator n=3 Tax=Bacteria RepID=C3RLZ3_9MOLU Length = 252 Score = 137 bits (346), Expect = 4e-31, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 93/269 (34%), Gaps = 21/269 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + Y L ++D + Y+L + +S + LA VS +S+++F +KLG Sbjct: 1 MTLDKLVEDNYHQLNENDLYIWQYILHHKRECQRISIKDLARNCNVSHTSILRFTKKLGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GF LK+ L LA +P ++I + T+ Sbjct: 61 EGFSELKVHLKWDLAQKPNFKP------------------RIIDDTYHEFIETMERMKNR 102 Query: 121 KLHECVTMLRSARRIILTGIG-ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 L + M+ A R+ + G G +A + AV + + + + Sbjct: 103 DLTNIMEMIEKAERVFVYGTGVVQANMAGELRRVFLYTNKVFHAVGNGTEIDTILNNVTK 162 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +DL + IS +G A + + + I L + + E Sbjct: 163 NDLFIIISLSGDNETAVTLARALRGLHIPRIGIAKVGNTLLSKYCDDMITFRYETFKVGM 222 Query: 240 ASI-SACHAQGMLT-DLLFIALIQQDLEL 266 + I A + D LF+ ++ E Sbjct: 223 SDILYGSTAHFFIISDFLFLRYLEYSQEK 251 >UniRef50_C3RLZ2 Transcriptional regulator n=3 Tax=Bacteria RepID=C3RLZ2_9MOLU Length = 251 Score = 137 bits (345), Expect = 4e-31, Method: Composition-based stats. Identities = 52/271 (19%), Positives = 92/271 (33%), Gaps = 22/271 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + + YQ L +D + +Y++ LS +LA VS+S++++F+++LG Sbjct: 1 MKLEELVNRNYQQLNDNDLYIWNYIIHHRKECERLSIDELALRCSVSRSTILRFSKRLGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG+ K+ L D + L TL + Sbjct: 61 KGYAEFKVFLR--------------------IDNQKNDKNALTDNIFNHYIETLEQYRDY 100 Query: 121 KLHECVTMLRSARRIILTGIG-ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E V + A+ + + G G AQ+ + + + A + Sbjct: 101 HYKEIVQSIYEAKNLYVYGTGVIQDNTAQHLKRSFSMVNKLFLDIDVLADFEAYINLFGS 160 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +D+ +AISY G + L + G V+AI L A + L+ TN Sbjct: 161 NDVFIAISYAGENQRLLDYVYRLKAKGVIVVAIIANNDCTLSHVADYSLHVKTLPVMTNQ 220 Query: 240 ASISACHA-QGMLTDLLFIALIQQDLELAPE 269 +L D + I+ E Sbjct: 221 GRREDLVGNYFILIDFIIANYIEYAKSRGNE 251 >UniRef50_C6VJY7 Transcription regulator n=3 Tax=Lactobacillus plantarum RepID=C6VJY7_LACPJ Length = 243 Score = 137 bits (345), Expect = 4e-31, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 90/252 (35%), Gaps = 18/252 (7%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 + Q L + + ++ Y++ P ++ +QLA+ + VS +++++F + +GY G+ K Sbjct: 5 DQVQQLKRLEIEIYKYIVGHPAEVSTMTIRQLADHSHVSATTILRFLKHMGYDGYAEFKF 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L E L P T LH + Sbjct: 65 TLKEQLRQDATQPLAQTVVP----------MRTFFDR-MNLPDITAK------LHRVAEL 107 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + AR ++L G G S +A + G + + D Q D + A+S Sbjct: 108 VHQARMVVLIGSGTSAGLAAYGSHLFANFGLYSLMISDTSQPHPVQQQDLSDTVFFALSV 167 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA-TNSASISACHA 247 +G ++ + + G KV+AIT + + L A L E + S + Sbjct: 168 SGESEDIIEQSVYYRQSGAKVVAITASSHSTLAGIADVVLTYDTPEVQAISGGSTLSQLP 227 Query: 248 QGMLTDLLFIAL 259 + L + + Sbjct: 228 VVYYLEQLAMII 239 >UniRef50_A5IVA6 Transcriptional regulator n=63 Tax=Staphylococcus RepID=A5IVA6_STAA9 Length = 254 Score = 137 bits (345), Expect = 4e-31, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 95/261 (36%), Gaps = 20/261 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I + + L +D +A ++ D +++ Q LA S +++ +F +KLG+ Sbjct: 1 MFLDEHINRNFDKLNDNDLHIAHFINTHIDECKNMKIQDLAQFTHASNATIHRFTRKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ K L + + I + +T + Sbjct: 61 DGYSDFKSYLKFE------------------SNKTHQLPSNSIDSFKQEIDSTFSYLERV 102 Query: 121 KLHECVTMLRSARRIILTGIGASGL-VAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + +A I L G G + L VA L+ + + + D H L + S P Sbjct: 103 DYQLLTEKMHTASTIYLYGTGRAQLNVASEAQRILLTLHNHVIVLHDEHELKMILNKSEP 162 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE-QATN 238 +DL IS +G EL + + +++T N L Q+A++ +Y + T+ Sbjct: 163 NDLFFIISLSGETHELLEVTNLLQLRQKYFISVTTMKDNTLAQKANYNVYVSSNTFYLTD 222 Query: 239 SASISACHAQGMLTDLLFIAL 259 S+ + + + L Sbjct: 223 GTDYSSFISYHIFFETLVRKY 243 >UniRef50_B5I710 Transcriptional regulator n=6 Tax=Streptomyces RepID=B5I710_9ACTO Length = 307 Score = 137 bits (344), Expect = 5e-31, Method: Composition-based stats. Identities = 52/274 (18%), Positives = 95/274 (34%), Gaps = 14/274 (5%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 L+ +++A YL+ A LS LA+ GVSQ SV +FA +G+ G+PAL+ L Sbjct: 37 RPRLSPGQRRIAQYLIEHITEAAFLSITDLADRVGVSQPSVTRFAAAVGFSGYPALREKL 96 Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN-SEEKLHECVTML 129 + D+ + + + +++ E L Sbjct: 97 QAIAL------GTLAGGPVADDESRGNELQAAVDAEIENLENLRRDFADPDRVIELGRKL 150 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP---DDLLLAI 186 + + + G+ S +A+ FA+ +I + V ++ S +LA Sbjct: 151 SESTPLTILGLRISASLAEYFAYAARRIHPDVRLVTRGGSVAYDALLQSREAGGTWVLAF 210 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S +E A G K+ +T + A T + + Sbjct: 211 SMPRHAQETLTALRVARSAGLKIALVTDLALGHVADEADVLFSTGTGSRLV----FDSYA 266 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A G++ L A+ D E R+ E + + Sbjct: 267 APGVIAAALLQAMTDADPERTQARLEEYEQISDQ 300 >UniRef50_UPI0001973198 transcriptional regulator, RpiR family protein n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001973198 Length = 325 Score = 137 bits (344), Expect = 6e-31, Method: Composition-based stats. Identities = 54/283 (19%), Positives = 100/283 (35%), Gaps = 11/283 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RI L D+ + DY++ A ++ Q+A +AGVS S+ V+ + +LG++ Sbjct: 45 LEARIAAA--RLTPRDRAVLDYIVKNKKEACFETAAQIAKKAGVSASAAVRVSGRLGFES 102 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPL-----RLVGEKLIKENTAAMYATLNVN 117 F K AL L + E + + + + N Sbjct: 103 FAQFKRALQAELKRELEGGMKVRPIPYEKIKSYDGLTDEELIGAIRQNALRNIERDQNPG 162 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 +L A R+ L G A A +F L + V + T+ Sbjct: 163 DYGSCSRAADILSEAERVFLVGFRACAGFAASFGVMLSCVRPGVHVVNGSCPTVDTLVDL 222 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 + D + ISY E AA + G +++A+T + + A L E + Sbjct: 223 TGRDAVAVISYDRYSSEAVFAASMARKAGSRIIAVTDRPSSPVCAGAEAILLNSTENLSF 282 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ + M ++L + + E ER++ E + + Sbjct: 283 ----YNSYVSLVMTMEVLTGLMSSRGREQNEERLKKMEEFLTE 321 >UniRef50_C9KM39 Transcriptional regulator GlvR n=2 Tax=Veillonellaceae RepID=C9KM39_9FIRM Length = 264 Score = 136 bits (343), Expect = 7e-31, Method: Composition-based stats. Identities = 54/279 (19%), Positives = 96/279 (34%), Gaps = 28/279 (10%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I Q L +D + Y+L + ARH+S +LA VS +++V+FAQKLG Sbjct: 1 MRLDEIINTHRQSLNDTDMVIWKYILQHREVARHISIHELAKACCVSSTTIVRFAQKLGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK L P S ++++ + T + Sbjct: 61 DGFGELKAILKMEEQETPRYSS------------------NVLEDLSDFYLKTGEKIFKR 102 Query: 121 KLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++ A R+ G V Q + + ++ + Sbjct: 103 NFDSASRLVHEANRVFTYASGYVQANVLQELKRLFFYDNVFLYDIPAREEFYSVLETLTK 162 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DDL + +S +G + A E+ +++IT N L ++ LY E Sbjct: 163 DDLFIIVSLSGETPAVVEFARELQLRDIPLISITKLHDNTLASLSTVNLYISPAEFQLYD 222 Query: 240 A------SISACHAQGMLTDLLFI---ALIQQDLELAPE 269 A S + ML ++ ++ + + E + Sbjct: 223 AEDGKHISFKSMMPYFMLIEVWYVKYRMYVHRLKERNIQ 261 >UniRef50_UPI0001C316A3 transcriptional regulator, RpiR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C316A3 Length = 280 Score = 136 bits (343), Expect = 7e-31, Method: Composition-based stats. Identities = 71/257 (27%), Positives = 109/257 (42%), Gaps = 7/257 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L +R R L SD+K+A+ +L QP S ++LA+ AG ++SSVV+F Q G +G Sbjct: 7 LLPHLRTRLPLLGGSDRKIAEVVLRQPQDVVFWSVRELADAAGTAKSSVVRFCQGSGLRG 66 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LKL L++ ++ + DP V +++ + Sbjct: 67 FHDLKLILAQET-------ALARESDPLAHDPAGDVLGAVVRAGAETLRDAAATVQRSAF 119 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 +L A +++ G G SG +AQ+ A +L IG AAA D S D Sbjct: 120 DATAGLLARADAVLVVGGGGSGPLAQDAAQRLRVIGVRAAAPADAPGQHVAAALLSRGDA 179 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 LAIS+ G A G AIT F + L A H L A + A++ Sbjct: 180 CLAISHRGATAGTLEAVAAAADAGAATAAITSFAGSPLTGLADHVLVAGARAASPRLAAL 239 Query: 243 SACHAQGMLTDLLFIAL 259 ++ A + D L +A+ Sbjct: 240 TSRLAHVAVLDALLVAV 256 >UniRef50_C9NY46 Predicted transcriptional regulator of the myo-inositol catabolism operon n=2 Tax=Vibrio RepID=C9NY46_9VIBR Length = 281 Score = 136 bits (343), Expect = 7e-31, Method: Composition-based stats. Identities = 54/265 (20%), Positives = 104/265 (39%), Gaps = 9/265 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R+ +RY L+Q +++AD+++ QP + +A +A V S++ +FA +G+ G Sbjct: 18 LRDRVVKRYDRLSQRLQQVADFVMAQPMLVAVETMATIAEQANVPLSTLSRFANTMGFSG 77 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGD----DPLRLVGEKLIKENTAAMYATLNVNS 118 F ++ E ++P + D D V + N A+ S Sbjct: 78 FSQMQALFREQYLNRPRDYKERVRQAREHDDMASDSPAAVFQDFGHANVEAIEQLQIAVS 137 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQAS 177 +KL + V++L A I + G+ + VA + LMK N + D L + Sbjct: 138 PQKLEKAVSLLDEAETIYIQGMRRAYPVAFYLWYALMKSDNNVVLIDDHGGMLKPLTKRM 197 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 + D+LL +++T E + + ++AIT + C E Sbjct: 198 NKKDVLLCVTFTPYAPETSELVENAHEKQVPIVAITDNQMTENGSKYDVCFEVKEGEVM- 256 Query: 238 NSASISACHAQGMLTDLLFIALIQQ 262 + + L L ++L+ + Sbjct: 257 ---GFRSLSSSMYLAQTLAVSLMCR 278 >UniRef50_A6M092 Transcriptional regulator, RpiR family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M092_CLOB8 Length = 236 Score = 136 bits (343), Expect = 8e-31, Method: Composition-based stats. Identities = 36/252 (14%), Positives = 96/252 (38%), Gaps = 21/252 (8%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 Q +++ K+ +++ + +++ ++LA+ VS S++++F KL G+ K Sbjct: 5 DNIQRFNETEIKIYKFIIDNEEKIHYMTIRELASAIQVSTSTIIRFCNKLDCDGYKKFKE 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L + + +I L + K N + K+ + + Sbjct: 65 RLEKYVHRM---------QEIPPQSDLTEMLNYFKKTNINSFEQ--------KIEQGGEV 107 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 +R + ++ G G+SG +A+ A +G + + D + +++A+S Sbjct: 108 IRKSETVLFLGSGSSGALAKYGARYFSNLGKFSMGLEDT---FYPITKDMKTTVVIALSV 164 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA-SISACHA 247 +G + + ++ +L+IT + + + + + + + N + + Sbjct: 165 SGETKGVIDLINQFKVSKCIILSITNQSNSTIAKMSDWNISYNMDMHQANGGYNATTQVP 224 Query: 248 QGMLTDLLFIAL 259 L + L + Sbjct: 225 VLFLIEALARRI 236 >UniRef50_C6DBI2 Transcriptional regulator, RpiR family n=9 Tax=Enterobacteriaceae RepID=C6DBI2_PECCP Length = 262 Score = 136 bits (343), Expect = 8e-31, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 91/236 (38%), Gaps = 8/236 (3%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 L +++ ++ ++ ++ ++LA + VS +++++ QK+G+ G+ Sbjct: 15 LTRAEYRVLAFIAEHSSLIGKITVRELAQKTYVSTATIMRLCQKIGFSGYSEFIYHCKTL 74 Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR 133 L P P+ D L + + T S + +LR Sbjct: 75 LTDNPRLSPSPVVTPD--DASLPDAFQHFVDNY----QRTFAYISHQDRATFSAILRQES 128 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRR 193 L G G S L A+ A KL +G +A + + + + + +AIS +G Sbjct: 129 HFFLYGAGFSHLFAEYLAKKLQVLGKDAFSSGLGDSRGIFLNNAPKYQVFIAISRSGETE 188 Query: 194 ELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS--ISACHA 247 ++ A +G KV+A T + N+L + A + + + IS+ + Sbjct: 189 QVLDKARIAKNIGMKVIAFTRASLNSLGELADLHFRLYDDAVHYAAEAGEISSFES 244 >UniRef50_C2JTN9 Transcriptional regulator n=3 Tax=Lactobacillus rhamnosus RepID=C2JTN9_LACRH Length = 268 Score = 136 bits (343), Expect = 8e-31, Method: Composition-based stats. Identities = 45/279 (16%), Positives = 97/279 (34%), Gaps = 19/279 (6%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + I ++ +ADY ++ + + VS++S+ +F +K+G Sbjct: 9 DIFILIESCRLNFTAVEQVIADY---HLSKQPAMTIDKSSAHLAVSKASITRFCKKIGLS 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + L + + V K+ + + + S+ Sbjct: 66 NYKELVFLYK---------------LSLNQETTDLSVSSKITAAYHSLATRSDSHYSQAV 110 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + L R I G G + +F +K ++G + D +++L + ++ D+ Sbjct: 111 IDAFCERLHQHRIIHFFGKGFNSYAGADFQFKFSRVGKYVRVITDENSILMSANFANQDE 170 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++ S G EL A + +L IT + L A L + + + Sbjct: 171 LIMVASLRGDDEELLKAMKIAKQRQVPILLITSNRYSQLVTHADVTLIAASLTKEEALGN 230 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 IS + D+++ I A + SE ++ K Sbjct: 231 ISPQIPILIQLDMVYERYI-HLYADAVSQWLASEQILHK 268 >UniRef50_B3WB04 RpiR-like protein n=8 Tax=Lactobacillus RepID=B3WB04_LACCB Length = 250 Score = 136 bits (342), Expect = 9e-31, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 95/254 (37%), Gaps = 10/254 (3%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 L+ ++ L DY+ + S QL+ A VS ++VV+ +K G+ G+ + L Sbjct: 1 MATLSPTEAYLWDYIENHQQAVVNASITQLSTAANVSPATVVRTMKKKGFNGYTDFRHDL 60 Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 + D + +K+I +N +Y TL + + V +L Sbjct: 61 LK---------RTGDAAPFSILDQVDDQIKKVIMQNQVEVYNTLENLKVSVIEDSVQLLA 111 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 A +++ G S +A KL +G A D + + SP + + I+ G Sbjct: 112 KAEIVLILARGLSESIASEVTLKLQLLGKYAEFFSDPNIIQTIAGQVSPKAVAITITLNG 171 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY-TIAEEQATNSASISACHAQG 249 EL AA + + +T + Q A ++ + +++ Sbjct: 172 ETPELVAAAKTLAARDIPQIILTTNAEAPIVQYADELFVGYKSKAAYFDKYEVASRLPLQ 231 Query: 250 MLTDLLFIALIQQD 263 +++ +L + + + Sbjct: 232 VMSRILLDSYVVRK 245 >UniRef50_C5EIL0 RpiR-family transcriptional regulator n=3 Tax=Clostridiales RepID=C5EIL0_9FIRM Length = 251 Score = 136 bits (342), Expect = 9e-31, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 91/261 (34%), Gaps = 21/261 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M R + Y ++++ + YLL D+ LS + A VS+S +V+FA+K G Sbjct: 1 MGLEERFNENYHRFTENEQYICRYLLEHKDSCIRLSITEFAGMCHVSESMLVRFAKKNGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ LK + + D + ++L++ + + Sbjct: 61 SGYGELKARFRLEQDTGDRREGELLD---LVTDSYHKMMDELMRRDMTS----------- 106 Query: 121 KLHECVTMLRSARRIILTGIGASG-LVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 L ARR+ L G G++ A + + + A + + Sbjct: 107 ----LFEKLHRARRVFLYGSGSAQTRAASEMKRIFLPV-KEMFHINGHDMRGALSRVVTA 161 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+ + IS +G A+E+ +L+IT N L LY + + Sbjct: 162 KDMAVIISLSGESGATVGLAEELRLRQVPMLSITRMGNNTLASVCDENLYIHSITLPASY 221 Query: 240 A-SISACHAQGMLTDLLFIAL 259 +L + L++A Sbjct: 222 GIEYEISTPYFILIEYLYLAY 242 >UniRef50_Q11C05 Transcriptional regulator, RpiR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11C05_MESSB Length = 307 Score = 136 bits (342), Expect = 9e-31, Method: Composition-based stats. Identities = 51/283 (18%), Positives = 104/283 (36%), Gaps = 11/283 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + IR R + Q + +AD+++ + S +LA ++ S++V+FA+ LG+ G Sbjct: 25 LINLIRLRRMSMPQKLRAVADFIIERAHEVPIHSITELARMLDIAPSAIVRFAKLLGFSG 84 Query: 63 FPALKLALSEALASQPESP----SVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 F ++ L + S S + V + N +A+ A Sbjct: 85 FSEMQRLLRSQAITGQNSYVGLTSKLTRPGAGQVSTIGHVLDAFFDANISALQACRAEVD 144 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG-FNAAAVRDMHALLATVQAS 177 +++ + V + SA I + G + +A + L +G L Sbjct: 145 VQEMEKIVEAMASANLIAVIGQKRAFPLASYLFYGLSMLGCKTVLFDGPGGLLQRQAAIL 204 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 +D+L+ IS+ ++ A +V+AIT + L A+ L+ Q + Sbjct: 205 DKNDVLITISFAKYAEDVIATARAAKEANVEVIAITDSKESPLADIATRALFV----QDS 260 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 N I + + LF+ L + + + + + Sbjct: 261 NLNGIRSISVTSTILQSLFVGLGIRI--ENKQALNKNRENNAR 301 >UniRef50_B9JRN1 Transcriptional regulator protein n=2 Tax=Agrobacterium RepID=B9JRN1_AGRVS Length = 298 Score = 135 bits (341), Expect = 1e-30, Method: Composition-based stats. Identities = 56/274 (20%), Positives = 105/274 (38%), Gaps = 5/274 (1%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 R+++R L+ +ADY+ S+ ++A E G S ++V++ Q LG++G Sbjct: 19 ERLKKRRDQLSPGLLTVADYIDGHRHAVLSKSALEIAFETGTSDATVIRAIQALGFRGLI 78 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 LK L L + +++ A+ A + + L + Sbjct: 79 DLKETLKAYLGETDSPIEKMAATTDDISGNSDAAVDFVLENQQTALAALASPENRAALSK 138 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSPDDLL 183 ++ AR I + GIGASG++A A + GF + A+ L + +L Sbjct: 139 AALLMAEARAIGVFGIGASGIIASYGARLFSRSGFPSYALNTTGISLAEQLLGLGTGHVL 198 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + + + RE E R+ ++ + G + L+Q AS L S ++ Sbjct: 199 VMLLHGRPHREAMTVISEAKRLDVPLILVLGQAESVLRQHASVSLVVP----RAKSEQVA 254 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 ++ + L +AL E E + L Sbjct: 255 LHAPSLVVIETLALALSALKPERTLETLNRLVEL 288 >UniRef50_A6BJ02 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A6BJ02_9FIRM Length = 300 Score = 135 bits (341), Expect = 1e-30, Method: Composition-based stats. Identities = 49/276 (17%), Positives = 105/276 (38%), Gaps = 12/276 (4%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L ++ K +A+Y+L A ++S ++A + GVS+SSV++F++ +G+ GF + AL + Sbjct: 27 HLTKTQKIIAEYVLDNASEACFMTSTEIALKLGVSESSVIRFSRTIGFDGFMDFQKALRK 86 Query: 73 ALASQPESPSVPIHNQIRGD------DPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 + S S I + D + K + NS E + Sbjct: 87 DYQDKVLSISSSITVPSQRIAKQAKLDTSSDYINRHFKNAAHNLEEIFIQNSIETFEQAA 146 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLAT-VQASSPDDLLLA 185 ++ S++ + + +A F L ++ + + S D L+ Sbjct: 147 DLIVSSKHKYIAATRGNICLADFFLLYLKQMVPHVTMTTTTSMSPIDHMCNISHTDCLVL 206 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 S+ + + A+ G ++ IT + L + A L + ++ Sbjct: 207 FSFPRYSSQDEVTAEMAHDAGASIIVITDKPSSLLAKYADILLTVPVDSNTF----FNSM 262 Query: 246 HAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +T+ L + +I + +R+ + + KL Sbjct: 263 IGPQFVTEAL-LEIISHRAKGIEKRLNIIDKYLNKL 297 >UniRef50_Q13RF5 Transcriptional regulator, RpiR family n=3 Tax=Proteobacteria RepID=Q13RF5_BURXL Length = 314 Score = 135 bits (341), Expect = 1e-30, Method: Composition-based stats. Identities = 51/281 (18%), Positives = 108/281 (38%), Gaps = 6/281 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + RI + Y L++ D++LAD +L P ++ +LA A VS+++ +F QKLGY Sbjct: 35 SIESRIAECYDELSEIDQRLADVILSAPGQLAMQTATELAATAQVSKATTTRFFQKLGYA 94 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + A++ A + + L V + ++ + +T Sbjct: 95 SYDD-ARAIARAAQVGGSPLYLQDRGRKNASTKLDDVIQAHLQHEVENLASTYRSLDTRV 153 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQASSPD 180 L E V + ARR+++ G S VA +L+++ + + L + S Sbjct: 154 LSEVVEAVAHARRVVIIGYRHSHTVATMIRRELIQVRSDVVLLPAPGDTLGEYLGDLSAK 213 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ + + + LAA + G ++ ++ + A + + Sbjct: 214 DVAIVVGLRRRVPAVGLAATALAEAGVPIVYMSDVIAGKPARLARWVIRCHTDGLML--- 270 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + +L+ + ++ LE ++ E L + L Sbjct: 271 -FDSNVGMTAVVNLICSLVAERLLERGTNHLQRVEILHESL 310 >UniRef50_C7HWU0 Putative uncharacterized protein n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HWU0_9FIRM Length = 285 Score = 135 bits (341), Expect = 1e-30, Method: Composition-based stats. Identities = 43/269 (15%), Positives = 108/269 (40%), Gaps = 11/269 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + Y+ L +++K +ADY++ P+ +S +++ANE VS ++VV+ Q G+ Sbjct: 9 KVIDIFKNNYKNLFKAEKIVADYIINNPNKVTLMSVKEIANETKVSDATVVRMCQHSGFD 68 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF +K+ L + ++ D E + + + ++ Sbjct: 69 GFYQMKILLLRDIGEGNQN---------DIADFQDKPIEFFLNRKKSLINTINKEDNINN 119 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + V+ L + ++ G + VA + ++L ++G LL + +D Sbjct: 120 IKKLVSKLLDSNITLIAATGNTLPVALDLEFRLNRLGIKTFTTSTNERLLNYTSNLNEND 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI--AEEQATNS 239 L+ IS +G+ + + +D K IT ++L + + +++ + + Sbjct: 180 FLITISKSGLSKNILKVSDIANNKNIKQACITSEINSSLSENSDITIFSGKLYNDINDSY 239 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAP 268 + + + ++ D++ + Sbjct: 240 NGLESHIGEFIINDIIIAFVASTKHNKNQ 268 >UniRef50_C4L7E2 Transcriptional regulator, RpiR family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L7E2_TOLAT Length = 282 Score = 135 bits (341), Expect = 1e-30, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 98/281 (34%), Gaps = 12/281 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RI + + + +++LA++LL SS +A A VS+ V +F ++LGY Sbjct: 6 LAQRIYLQLEQMGPKERQLAEFLLTHEAELAIYSSADMARLARVSKPVVSRFFKRLGYDS 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F ++ L + S + + + + + TL L Sbjct: 66 FAEVRQDLRKVQTSGSPLLAD------QQPSDIGTLLANHQAQEARNWQQTLTDLQRLPL 119 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQASSPDD 181 + SAR+I + G S VA ++ +L+++ V L + + D Sbjct: 120 DVIADTMCSARQIKVIGFRNSYPVALHWRQQLLQLRTCVDLVPQPGQTLAEELSQLNEQD 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++ ++ + + + L IT + A L + Sbjct: 180 LVIMVAMRRRPVNVKRIMQWLGKSPATCLLITDPSGLEHATHADWTLTCH----QISPGG 235 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAP-ERIRHSEALVKKL 281 ++ + + L+ Q+ + + + I L+ +L Sbjct: 236 FASYASAMAVVSLMSNLCQQKLSDDSRVQAIDDLFDLMDEL 276 >UniRef50_A5IZ72 Transcriptional regulator n=1 Tax=Mycoplasma agalactiae PG2 RepID=A5IZ72_MYCAP Length = 288 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 48/268 (17%), Positives = 113/268 (42%), Gaps = 6/268 (2%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 L +S+K + D++ + +LS +LA A S+++V +F +K +K + +++ Sbjct: 17 LTKSEKNILDFINSFEQSEFNLSQAELAKLANSSEAAVSRFVRKYHFKDYRNFIASINIK 76 Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR 133 L++ + N + + A+ + E + ++ ++R Sbjct: 77 LSNFQRMYPIKYDNGQEPNPFSV-----IYSSYKYAIENINEESVTENCIKAAELINNSR 131 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRR 193 +++ G G+S + + L+KIG + D H + + +D L+ S Sbjct: 132 NVLIYGSGSSQRRSLDLVANLIKIGKSVVYNSDFHIFFPALANADSNDTLIVFSNNLKST 191 Query: 194 ELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTD 253 E + + G K++AIT N + + + + T +S+ +Q ++ + Sbjct: 192 ESHFVISNAHKNGLKIIAITSKNDNKINKNLDVIIQYQKIQNDTLLVPVSSRVSQMLIGN 251 Query: 254 LLFIALIQQDLELAPERIRHSEALVKKL 281 +LF A+I + + +++ S AL+ + Sbjct: 252 ILFEAIIYNN-DENYNKLKKSSALIDEW 278 >UniRef50_B2TLN0 Phosphosugar-binding protein n=1 Tax=Clostridium botulinum B str. Eklund 17B RepID=B2TLN0_CLOBB Length = 247 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 49/265 (18%), Positives = 113/265 (42%), Gaps = 19/265 (7%) Query: 1 MN-GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M+ + + L ++K + ++ + A+ LS ++A E VS ++VV+ LG Sbjct: 1 MSTLITYFSDKLNNLTYAEKHIFYFINSDLEKAKKLSLTKMAEENNVSTTTVVRMCTDLG 60 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ LK L + + + I ++ +L+ S Sbjct: 61 LSGYSELKYILKNLNTNSTPN------------------IDNYIGTIKTSINLSLDKLSI 102 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + +++ V ++ A+++I+ +G S + + F+ LM+ ++ + + H + +++S Sbjct: 103 KNINKLVDVIHKAKKVIIVSVGLSKPMGEYFSKLLMQANKSSFYIYESHIIDLLDKSTSH 162 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DDL++ IS +G L A+++ K AI ++L + + T +E+ Sbjct: 163 DDLIIFISNSGNTSTLTTVAEKLCYRNFKTAAIVNTPDSSLSKFVDIAINTHSEKNTLYG 222 Query: 240 ASISACHAQGMLTDLLFIALIQQDL 264 I+ ++ D++F I + Sbjct: 223 YDITPRSTLLIILDIIFAYYINKTK 247 >UniRef50_Q5WG85 Transcriptional regulator n=3 Tax=Bacteria RepID=Q5WG85_BACSK Length = 245 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 115/255 (45%), Gaps = 14/255 (5%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I + Y+ L S+K++ Y++ D H+ LA VS++ ++ AQKL + GF + Sbjct: 4 ILKNYEELTVSEKRVLSYIMENQDQIPHIKINDLAEATFVSKTVIINLAQKLDFSGFREM 63 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 K +S+ + + + ++ +++K+ +M T ++ +EE+L + Sbjct: 64 KYYISQRIIEKM-----------SAQETSTVLYREILKQ---SMDKTFSLVTEEQLQKTA 109 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 +++A+ + + G S V L+ IG ++D + + +D+++ I Sbjct: 110 AKIKAAKNVFIMARGTSKAVGYYLEHLLLTIGIQCIFIKDYNLSEVFTDFVAEEDIVIFI 169 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S +G +++ A ++ ++++IT F N L + ++ L+ ++ T+ + Sbjct: 170 SLSGDTKKIINTAKKIHLKKAEIISITSFKTNELTRYTTNNLFCYTDKTNTSKNDTISRT 229 Query: 247 AQGMLTDLLFIALIQ 261 + DLL L Sbjct: 230 GFFLTIDLLVDKLAN 244 >UniRef50_A5I3B9 Phosphosugar-binding transcriptional regulator n=11 Tax=Clostridium RepID=A5I3B9_CLOBH Length = 245 Score = 135 bits (339), Expect = 2e-30, Method: Composition-based stats. Identities = 43/260 (16%), Positives = 107/260 (41%), Gaps = 17/260 (6%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + + + L +++K + Y+ ++S +A ++ S ++V + +K G +G Sbjct: 2 VIEVNKSIFDSLTETEKTVVKYINSNESNIPNMSIVDVAEKSFTSPATVSRTIKKCGLEG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F L+ +S +S +++ ++ + T+ S E L Sbjct: 62 FSELRYKISAKNDYNHDSKK----------------VNEILGKSLIEVTKTIENISVENL 105 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V +++ A+RI + G + LVAQ F KL +G+N + D + + + ++L Sbjct: 106 LKTVRLIKEAKRIYILARGLTELVAQEFNLKLELLGYNTFLIVDPNIMRKICKTLDKEEL 165 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS- 241 ++ S E+ +A+ ++ G K++ + L+ + L + + Sbjct: 166 VIVFSLKIGSPEIVESAESAVKTGAKLITCCCVKNSKLENLSDITLIGYKQSRTAIKEFE 225 Query: 242 ISACHAQGMLTDLLFIALIQ 261 +++ +++ + LI Sbjct: 226 VTSRLPLFIISRAIIDYLII 245 >UniRef50_Q0C066 SIS domain protein n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C066_HYPNA Length = 276 Score = 135 bits (339), Expect = 2e-30, Method: Composition-based stats. Identities = 43/266 (16%), Positives = 100/266 (37%), Gaps = 12/266 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L+I++ Y+G ++ + +A Y+L P+ + +A GV S+VV+ A+ LG+ G Sbjct: 9 LRLQIKREYEGFSKQLRIVAQYILDHPNEIGLETVTVVAERMGVQPSTVVRLAKVLGFDG 68 Query: 63 FPALKLALSEALA-------SQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLN 115 L+ + + + + + V ++ ++ + + Sbjct: 69 ASQLQKLFKDEVVNSAGALGYKERIRRYKAPASNAKSNHVSSVLDEALECGILGLEDLRH 128 Query: 116 VNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL-ATV 174 + ++ V ++++A I + G S VA ++ L ++ N + L + Sbjct: 129 SMNASEIATAVKLIQTASTIYVAGFQRSFPVAAYLSYALQRLRKNTIFIDGTGGLYEHQI 188 Query: 175 QASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE 234 ++ DDLL+AI + ++ D+ R K++ I+ + + A Sbjct: 189 SFANKDDLLIAIGFNPYSDQIVATLDQAKRNKLKIVGISDSHVSPVVSGAHAPFIVHDPV 248 Query: 235 QATNSASISACHAQGMLTDLLFIALI 260 + L + +A Sbjct: 249 ----VRGFRTLTSSMTLAQAIVLAYA 270 >UniRef50_A6WYS0 Transcriptional regulator, RpiR family n=4 Tax=Rhizobiales RepID=A6WYS0_OCHA4 Length = 280 Score = 134 bits (338), Expect = 3e-30, Method: Composition-based stats. Identities = 56/284 (19%), Positives = 109/284 (38%), Gaps = 14/284 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L R+R L ++K+L +++ P S+ +LA A VS ++V +F Q+LGY Sbjct: 7 SFLTRVRDVMDELPPAEKRLGEFVCDFPGELASYSASELAALAHVSNATVTRFVQRLGYD 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + + E + + G VG+ + T E + Sbjct: 67 TYEESRRHAREEKQTGSRLFLSSATDAESGQSLSSHVGQGIANL-----EKTFLSIRETQ 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQASSPD 180 + V + AR+ + G +S A W+++++ N AV L + + SPD Sbjct: 122 IDAVVEAMLGARKTWVFGFRSSQPFAAYLQWQMIQVVDNIVAVPGPGQTLGEYIASISPD 181 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+++ + +++ + + G K+L IT + A + Sbjct: 182 DMVIVFALRRRIAKMDDILAAIEKRGAKLLYITD-EGAPFRASAQWHFHCQT----LAPG 236 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSE---ALVKKL 281 + A L LL I++ +R+R E L+++L Sbjct: 237 PLFNHVAVMALCHLLTTRAIEKAGASGRKRLRDIEASGDLLEEL 280 >UniRef50_UPI000196BB09 hypothetical protein CATMIT_01392 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196BB09 Length = 279 Score = 134 bits (338), Expect = 3e-30, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 109/267 (40%), Gaps = 6/267 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L + ++ + L ++D + Y++ + SS QLA E S +++++ +K+G+K Sbjct: 5 ILEQFKKDF-KLNENDLFIIQYIIEHSEEITSYSSHQLAKETYSSPTAIIRLVKKIGFKN 63 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + KL + + + +I ++ L + KL K T + T + Sbjct: 64 YNDFKLNI-----HSLLNKYTLSNMRIMSNEDLYTIKNKLAKIETGIINQTKENLNSNVF 118 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 +E +T++ + I + A+ +++ + L + + + L + D Sbjct: 119 NEVMTIISRNKYIDIIANDANAAISEYGSHILSSVNKFVNVYHNGNRQLWFSLNVTSDHT 178 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++ IS G R L AD + + + IT N L + + LY I + N + Sbjct: 179 VILISKFGKTRHLLNIADTLKQRHIPFIVITTDDTNDLAHKTPYVLYGINHGELDNLKDM 238 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPE 269 + + DL++ AL D + A E Sbjct: 239 IFYISLKYIFDLIYTALFSYDYKQAKE 265 >UniRef50_UPI0001BC4077 transcriptional regulator n=1 Tax=Fusobacterium sp. 3_1_5R RepID=UPI0001BC4077 Length = 275 Score = 134 bits (338), Expect = 3e-30, Method: Composition-based stats. Identities = 40/279 (14%), Positives = 108/279 (38%), Gaps = 9/279 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +I++ L +++K++A + L + ++S+++A +S +S+++F + +G+ Sbjct: 4 LYEKIKEA--KLTKTEKRIAQFFLESEEDIFFMTSKEIAELLQISDTSIIRFVKHIGFTN 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F + + L ++ S I N + L+ + + + S K+ Sbjct: 62 FTDFRDFIKNNLQTKMASLPQFIQNMEELKHNSVE--QALLSQMNKNISTLFDTKSLAKM 119 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLM-KIGFNAAAVRDMHALLATVQASSPDD 181 E + +L A + G+ ++ +A +L +G V + L +++ +D Sbjct: 120 EEIIDVLWEAENRYIVGLKSTVGLANFLGIRLSFMLGKVYTFVSNDTILFNSIRNIKKED 179 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L Y RE+ L + G K++ ++ + A + + Sbjct: 180 VLFLFDYPTYSREMILLCRVAKKRGAKIILVSDMINSPCSMYADIHFTIKIKGISL---- 235 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + + L A+ ++ + + + L+ + Sbjct: 236 FHSLISSQFFVEYLLSAISKKMTKDQKKEFLVWKKLLSE 274 >UniRef50_C2HBU5 RpiR family transcriptional regulator n=3 Tax=Enterococcus faecium RepID=C2HBU5_ENTFC Length = 255 Score = 134 bits (338), Expect = 3e-30, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 92/262 (35%), Gaps = 19/262 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I Q + L++ D+ + +++L P ++L LA VS+SS+++ +KLG+ Sbjct: 1 MELEKLIHQHAEKLSELDRGILNFILSDPSLIQNLKITDLAERLYVSKSSIMRTTKKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ K L + + E + ++ + TL+ Sbjct: 61 SGYSEFKYFLRH----------------VTNKENGLRTKEDIFEKQLEDIQQTLHYMKAV 104 Query: 121 KLHECVTMLRSARRIILTGIGASG-LVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 L + L ++ I G S V F ++ IG + + + + Sbjct: 105 NLKPILQCLDRSKMIYCYATGFSQKKVIDEFYKMMLGIGKRVMVLPNKTEFDMAMPLITL 164 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN- 238 +D+ + +S +G E+ VL IT N + +++ L Sbjct: 165 EDMAIIVSMSGETHEVKENLTAFELQKIPVLTITAAGDNYFTRHSTYHLNYYCNCFILGK 224 Query: 239 -SASISACHAQGMLTDLLFIAL 259 + + + L D L A Sbjct: 225 ENKPFQSLISLSCLADYLVRAY 246 >UniRef50_UPI000196AB43 hypothetical protein CATMIT_01461 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196AB43 Length = 295 Score = 134 bits (338), Expect = 3e-30, Method: Composition-based stats. Identities = 52/243 (21%), Positives = 101/243 (41%), Gaps = 3/243 (1%) Query: 6 RIRQRYQG--LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 IR+ + + ++K+L YL+ Q + + + +A E ++ SSVV+F QKLG++GF Sbjct: 2 LIRESLEKCPMNPNEKRLGQYLISQGIQLENATVRTVAKEVFLAPSSVVRFVQKLGFEGF 61 Query: 64 PALK-LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 K L E + + +D ++ K+ + T+++ + + L Sbjct: 62 NDFKKQYLEEIRYLSTHFQEIDSNRPFSQNDKNIVIANKIGLLYDETLQDTISLLNHDTL 121 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 E + + I + GA +A F K+MKIG S + L Sbjct: 122 QEAINRIEKKEHIAIVVSGAQKGIAYTFKEKMMKIGKKVDIFDSTDEAFYEACYCSSNTL 181 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 + ISY+G + +++ + IT + N+L ++ CLY E+ ++ Sbjct: 182 FILISYSGETSKCLFICHKLVERKLSFITITTYGTNSLSSQSDCCLYVSTREKLIDNLGT 241 Query: 243 SAC 245 + Sbjct: 242 FSF 244 >UniRef50_B1QZ16 Transcriptional regulator, RpiR family n=2 Tax=Clostridium butyricum RepID=B1QZ16_CLOBU Length = 246 Score = 134 bits (338), Expect = 3e-30, Method: Composition-based stats. Identities = 38/255 (14%), Positives = 103/255 (40%), Gaps = 20/255 (7%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 ++ + L + ++ +Y++ D L+ ++LA VS +++++F +K+ +GF K Sbjct: 5 KQIESLNDLELRVYEYVIKNHDRVLKLTIRELAKNIHVSTTTILRFCRKMDCEGFHEFKY 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L + +A + + + + + +K+ + + Sbjct: 65 KLKDQIAETDKDFKLNTDDY----------------AIIDYFERSNQPSEVQKILDATKI 108 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + +++II GIG SG++A+ + + IG A + + L+ +++ S Sbjct: 109 IHKSKQIIFLGIGTSGILAKYASRCFVNIGRFAVYIDYPYFLVPDGFY--DKMVIIVFSV 166 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL--YTIAEEQATNSASISACH 246 TG ++ + +++IT + + + + + Y + + N ++++ Sbjct: 167 TGETEDIIKQLRQFRNFDCIIISITNSEMSTIAKLSDLVISYYLPLQIKGDNKVNLTSQI 226 Query: 247 AQGMLTDLLFIALIQ 261 + + L L Q Sbjct: 227 PVMNIIEKLTFNLSQ 241 >UniRef50_B2V3J2 Transcriptional regulator, RpiR family n=2 Tax=Clostridium botulinum E RepID=B2V3J2_CLOBA Length = 258 Score = 134 bits (337), Expect = 3e-30, Method: Composition-based stats. Identities = 51/269 (18%), Positives = 97/269 (36%), Gaps = 20/269 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + + Y L ++DK + Y++ D+ LS + A++ VS +++ +FA+K+ Sbjct: 1 MRIEELMNRYYSDLNENDKFICKYIINNKDSCYKLSIDEFASKCNVSNTTLFRFAKKISL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK L + ++ + T + + + Sbjct: 61 PGFSELKARLRLEVETKNNEKI------------------DFLSTVTESYHKVVEYIKNR 102 Query: 121 KLHECVTMLRSARRIILTGIGASGL-VAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + A+RII+ G G + V F + + A ++ Sbjct: 103 DCTNIFEKMYKAKRIIVYGNGYAQARVTSEFKRIFLPTEKTIFNMHGYDMAKAVEALANE 162 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD ++ IS +G +++ A+ + G L+IT N L LY + N Sbjct: 163 DDFVIIISLSGESKDVIKLAEALRLKGISTLSITKMINNTLAGFCEENLYINSIPLPRNY 222 Query: 240 A-SISACHAQGMLTDLLFIALIQQDLELA 267 +L +LLF+ + EL Sbjct: 223 VLDYEISTPYFILIELLFLKYQKYLSELY 251 >UniRef50_C1YQ52 Transcriptional regulator n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YQ52_NOCDA Length = 280 Score = 134 bits (337), Expect = 3e-30, Method: Composition-based stats. Identities = 60/281 (21%), Positives = 112/281 (39%), Gaps = 7/281 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N R+ + L +SD+ L D LL P A ++A AGV ++ + AQ+LGY+ Sbjct: 5 NLQERMSEYRDRLTKSDRVLLDELLSNPAEAPLWRGGEVAQRAGVHPAAATRLAQRLGYQ 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ L+ L EA ++ ++RG V + L+ ++ A S+ + Sbjct: 65 GYLELREDLREAHEARLNGAGDRFRAELRGQG-QASVLDTLLTTELDSLAAVGKHVSQAQ 123 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG-FNAAAVRDMHALLATVQASSPD 180 + E +L AR + L G SG++A+ +L + G V + V A S Sbjct: 124 IDEVADLLVGARVVYLFARGNSGVLAELLDSRLRRFGMRPVNLVGPGREVAERVLAMSDS 183 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D++++ ++ R L VG + + +T L + L Q Sbjct: 184 DVVVSFAFRRAPRGLTQLYAHACEVGARSVLVTDTLH-TLDPAPTTVLSAPRGHQE---- 238 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S+ M+ + + + + Q+ E + + L+ Sbjct: 239 GFSSLSVPMMIANAIVLTVAQRHPETILPALDRLDDLLNAF 279 >UniRef50_Q2KXW9 Putative transcriptional regulator n=1 Tax=Bordetella avium 197N RepID=Q2KXW9_BORA1 Length = 289 Score = 134 bits (337), Expect = 3e-30, Method: Composition-based stats. Identities = 55/285 (19%), Positives = 112/285 (39%), Gaps = 8/285 (2%) Query: 1 MN---GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQK 57 M+ RI +Y L + ++ A Y + P + S + A +AGV S++ + A++ Sbjct: 1 MDKRMVDKRIEAQYGELPPALQRAARYAIDNPKSIALQSMRATAAKAGVQASAMHRLARQ 60 Query: 58 LGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 LG++G+ AL+ E LA S + D + +L+ ++ + A L Sbjct: 61 LGFEGYEALRTVYREWLARSAGSFAERATALQSRSDKAGSLARELVLADSGNLAALLEPA 120 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQA 176 + E + +L ARRI + G+ + A F + + + + ++ Sbjct: 121 ALEAISAASEILAQARRIYVGGLRSLFPAAFYFNYACGMFRQDTVLLSGIAGTFADDLRH 180 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 + PDD LL SY R+ A G +++++T + + AS + + Sbjct: 181 AGPDDALLMFSYDPYARDAVSAVRFAHARGLRIVSVTDSVVSPIAAPASAVILVANATPS 240 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + L L+ + + + SEA +++ Sbjct: 241 L----FPSVVPALAVAQALVGLLVARGGQANLSEVEKSEAQLREF 281 >UniRef50_C2EL56 RpiR family transcriptional regulator n=4 Tax=Lactobacillus RepID=C2EL56_9LACO Length = 251 Score = 133 bits (336), Expect = 4e-30, Method: Composition-based stats. Identities = 53/265 (20%), Positives = 101/265 (38%), Gaps = 25/265 (9%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 L+ + + +++ P+ ++ + +AN+ V+ SSV++F KLG+ FP K L Sbjct: 9 LSSLSDVELTVYRFVVNNPEKVVYMRVRDIANQTHVANSSVMRFIHKLGFGSFPEFKAYL 68 Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 + I + ++ L + K+ +L Sbjct: 69 KN---INQTVATRHIFTFVNQNNFLPDIENKI--------------------RLVADLLY 105 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 + I L GIG S A A L +GFNA + D L ++ ++ +L S +G Sbjct: 106 QSDNIPLLGIGNSASTAMYAARILALLGFNAFPITDPFYPLNKQLENTSNNTILCFSVSG 165 Query: 191 VRRELNLAADEM-LRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ-ATNSASISACHAQ 248 EL + R +V+AIT + + + + L ++Q +S+ Sbjct: 166 ETEELIEQLNYCTKRPDNQVVAITSNPTSTIANISKYVLAYKEQKQRLFKYCDLSSQIPA 225 Query: 249 GMLTDLLFIALIQQDLELAPERIRH 273 + + L LI ++ +L E Sbjct: 226 MYIVEALAQVLISKNQDLTNENKAQ 250 >UniRef50_B5H8Z9 Transcriptional regulator n=3 Tax=Streptomyces RepID=B5H8Z9_STRPR Length = 315 Score = 133 bits (335), Expect = 6e-30, Method: Composition-based stats. Identities = 57/277 (20%), Positives = 99/277 (35%), Gaps = 22/277 (7%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 L+ +++A Y++ A LS LA GVSQ SV +FA LGY G+PAL+ AL Sbjct: 46 HRLSPGQRRIAQYIIDHLTEAAFLSITDLAERVGVSQPSVTRFATSLGYSGYPALREALQ 105 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN-----SEEKLHECV 126 + + + + ++ A L +++ Sbjct: 106 ----------PIALSAVAGSPETRAEIRRNELQAAVDAEIQNLENLRRVLADTDRVLGIG 155 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP---DDLL 183 L + + + G+ S +A+ FA+ +I + V ++ S + Sbjct: 156 RELALSMPLTVLGLRISVSLAEYFAYAARRIHPDVRLVTRGGSVAYDALLQSREAGGTWV 215 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 LA + E A R G +V IT T L + A L + Sbjct: 216 LAFAMPRHANETLAALRAARRTGLRVALITDLTLGPLVEEADVTLTAGTGSRLV----FD 271 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + A G+L+ + A+ D E R+ E + + Sbjct: 272 SYAAPGVLSAAVLQAMADADPERTQVRLEGYEQVADQ 308 >UniRef50_A6LRA2 Transcriptional regulator, RpiR family n=3 Tax=Clostridium RepID=A6LRA2_CLOB8 Length = 247 Score = 133 bits (335), Expect = 6e-30, Method: Composition-based stats. Identities = 38/237 (16%), Positives = 90/237 (37%), Gaps = 19/237 (8%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 + + L + + +Y++ D R++ ++LA E+ VS ++++ F +K+G G+ KL Sbjct: 5 SQIKSLNDLEISVYNYIMDNKDKVRYMKIRELAVESHVSTTTILNFCKKVGCSGYSEFKL 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 + + + E T +EK+ E V Sbjct: 65 KFKLFIEEKEIKKVSEDNT-----------------EIIDFFKKTNTEEYDEKIEEIVKA 107 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + A+R I G SG++A+ A L +G + + D + T + +++ S Sbjct: 108 ILKAKRTIFIGSSMSGIIARYGARYLSSVGQFSLCIDDPYYP--TTGKFYENSVVIVCSV 165 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 +G +++ + + +++IT + + + + + I+ Sbjct: 166 SGESKDIIGHINRFKKDNCCIVSITNTENCTIAKMSDYNIPYYVPYVKVGIYDITTQ 222 >UniRef50_A9IJZ1 Putative regulator (SIS family) n=4 Tax=Bordetella RepID=A9IJZ1_BORPD Length = 324 Score = 133 bits (335), Expect = 6e-30, Method: Composition-based stats. Identities = 50/286 (17%), Positives = 99/286 (34%), Gaps = 12/286 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R++ + L ++ A ++ P S ++ A GV+ +++++ A+ GY Sbjct: 21 VQQRLQSLLEQLPPELQRAAHWVADHPAEVGLWSMRRQAQALGVAPATMLRLARAAGYDS 80 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVG--EKLIKENTAAMYATLNVNSEE 120 + A + +ALA + + +++ + L + A+ + ++NS Sbjct: 81 YEAFRAPFQQALAGERPASLRERAAELQAAHGSAGAPGHDALTELQARAIQSVCSLNSSA 140 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASSP 179 V L AR++ G ++ +A + + N+ + TV Sbjct: 141 AFDASVKTLLEARQVGFLGTRSAFGIAFQMHYAYQLVRRNSVLIDGLGGLQAETVDNLRD 200 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT------IAE 233 D L+AIS + A + + G V+A+T T + L A H L Sbjct: 201 GDALIAISQSPYPSASVRLARQAAQQGVAVIALTDDTLSPLAVDARHVLLFERPDREGVR 260 Query: 234 EQATNSAS---ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 Q L + L L + E R+ E Sbjct: 261 HQPAQRGPGSFFHTTAGLLGLAEHLIARLTARGGEEVLNRLSEIED 306 >UniRef50_Q1IJW8 Transcriptional regulator, RpiR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJW8_ACIBL Length = 294 Score = 133 bits (335), Expect = 6e-30, Method: Composition-based stats. Identities = 53/276 (19%), Positives = 100/276 (36%), Gaps = 9/276 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ RI Q L+ +++ P LS + +A++ G +++V+ AQ LG+ Sbjct: 17 MSQAERIAQ----LSPRRREIVRPAFEDPRRFVLLSVRDMADKLGTDPATMVRIAQNLGF 72 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + + + L E + S + D + V + + + A N E Sbjct: 73 ESYKEFQHYLHELSVVRATS-LDTLEASASTDSDVVSVMRACLDQELKNIRALYNGLDLE 131 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 KL + ARRI++ G A+ + + IG A A + V++ Sbjct: 132 KLGTAARRMWRARRILVVGGDAATSLVSYTEYHFNVIGLPAYAATSPGVAVHAVRSLGKS 191 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+LLAIS+ R A + G + IT + + + A + + Sbjct: 192 DVLLAISFRRGLRMTIEAIQQARNAGAYCIGITDTYISPVARFADEFFLAGIDSNSFGV- 250 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + A L ++ +A+ Q E + Sbjct: 251 ---SYSAPMCLLNVFLVAIAQAQRAKTLEVMTKVAE 283 >UniRef50_D0CS12 Transcriptional regulator, RpiR family n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CS12_9RHOB Length = 329 Score = 133 bits (334), Expect = 7e-30, Method: Composition-based stats. Identities = 44/277 (15%), Positives = 103/277 (37%), Gaps = 6/277 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + R+R++ + + + + Y++ P S + A++ GVS +++++ A ++G+ Sbjct: 38 LIDRLRRQIDHMPEQLQAVTKYIIDHPADFGLDSIRATADKIGVSTNAIIRLAHRMGFSR 97 Query: 63 FPALKLALSEA-LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F + + + + ++ P + + +L + K Sbjct: 98 FEDFRAPFRQDLTTDREDRLGQDWLTRMADTGPFGAAQADFARNELNVVSRSLRLLDPAK 157 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSPD 180 + +T++ SA+R +T AS +A F + N + M + + + ++ Sbjct: 158 VETAITLMTSAQRCFVTATRASHALAYYFHYAGRMAHPNLHLIPRHMGSAIDDLLDANQT 217 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D LLAI+ + A + G +++ + A A L + Sbjct: 218 DCLLAITIHPYSSDTIQAMRFARKQGLRLILLADSDVIAPGIDADVTLKISTRSKHL--- 274 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 S+ ++L L Q + A ER+R + Sbjct: 275 -FSSFSGAMAAIEVLLGHLFAQSGDAAAERVRRYQQA 310 >UniRef50_A9BSK7 Transcriptional regulator, RpiR family n=4 Tax=Burkholderiales RepID=A9BSK7_DELAS Length = 314 Score = 133 bits (334), Expect = 7e-30, Method: Composition-based stats. Identities = 55/279 (19%), Positives = 91/279 (32%), Gaps = 6/279 (2%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 R+ Q+ L S+ +A L A S+ LA G S S+VV+ KLGY + Sbjct: 14 QRLAQQGADLTASELTVAQTLGSNYPHALLESATALAAHTGTSASTVVRLFAKLGYASYA 73 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 + + + ++ + + L + + + + AT Sbjct: 74 EAQREARGEVTALLQTAAQRAPVLLGAQRSLSECVDDALLHDQHNIQATREGLDMAAFEA 133 Query: 125 CVTMLRSA-RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL-ATVQASSPDDL 182 L R+ + S V+ A L + + P D Sbjct: 134 MARKLAQGEGRVFVLAQLNSSPVSAWLALHLNMCRPGVQELDAGAIAPADQLLWIGPSDT 193 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 LLA S + R A G +VLA+T L A H L N++ Sbjct: 194 LLAFSVSQYSRGTFEIAQRFADAGAQVLALTDSPAAPLATVAHHWLQVRT----ANASPF 249 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + A L + L A+ Q + E + +AL K+ Sbjct: 250 HSYTAAFYLCNALVSAVAQLRHKDVSEALARRDALWKEF 288 >UniRef50_Q38ZK5 Putative transcriptional regulator, RpiR family n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Q38ZK5_LACSS Length = 248 Score = 133 bits (334), Expect = 8e-30, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 102/248 (41%), Gaps = 11/248 (4%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 + ++++ L DY++ D ++ S ++LA E VS ++ ++F +K+G+ G+ + Sbjct: 1 MNKNEQILLDYVIKNMDDIKNRSIRELAAECFVSTTTFLRFVRKIGFSGYSEFITVIKYT 60 Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR 133 + +Q ++ V + + E + T+ V +KL+ VT++ Sbjct: 61 ILNQDQTEEVNPFVVNQVANRT---------EYLKNINETVRVLDNDKLNAIVTLMTKKP 111 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRR 193 ++ G S A+ + GF ++ + + DD+L +Y G + Sbjct: 112 KLYFFAKGFSKYAAEYIEYLYTLKGFIVIFPKNYEQRQLAYRNINQDDILFVFNYEGEDK 171 Query: 194 ELNLAADEM--LRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGML 251 EL + K+++IT N +Q + LY +E + +++ + + Sbjct: 172 ELIEILQIIERKCQYAKLVSITSANNNTIQNMSDINLYLFTDELYQHKVEMTSHVSLIAI 231 Query: 252 TDLLFIAL 259 +LL Sbjct: 232 MELLLYQY 239 >UniRef50_C0CQ65 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CQ65_9FIRM Length = 285 Score = 132 bits (333), Expect = 9e-30, Method: Composition-based stats. Identities = 55/282 (19%), Positives = 108/282 (38%), Gaps = 9/282 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M R+ Q L ++++K+ + ++ A + QLA GVS S V + QKLGY Sbjct: 1 MTLAERVEQT--KLTRTEEKIVEMVMNDISKAAFFNGAQLAAFCGVSASLVTRLIQKLGY 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + F KL L + + Q +P + + I ++ + A NS E Sbjct: 59 QSFNEFKLEL-QEIYRQEVTPYDIFQKYLSEEGSKNSSIHAFIAQDIENLAAIEQNNSAE 117 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHAL-LATVQASSP 179 + + A+++ + + AS A+ A L ++ V D+ P Sbjct: 118 TIDAVANAVHKAKKVYILAMFASESPARTLAHYLDRLNIPYQCVFDLGLSKKIEYIRPKP 177 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +D+++A S+ G+ +E+ A + + + +++IT N L + + + L + Sbjct: 178 EDVVIAFSFQGILKEIYEACEYIHQGKTPIISITDTKANRLTRLSDYSLTVSVSGSVFDY 237 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAP-ERIRHSEALVKK 280 + A + +L L R K+ Sbjct: 238 ----SHVATMAMVTILANRLADTFEPEYLFSRFAQIRNEWKE 275 >UniRef50_UPI00016A9B9D transcriptional regulator, RpiR family protein n=2 Tax=Burkholderia oklahomensis RepID=UPI00016A9B9D Length = 291 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 51/281 (18%), Positives = 98/281 (34%), Gaps = 7/281 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L R+R Q + ++K++A L+ + ++AN AGVS ++V +FA+ LG+ G Sbjct: 8 LLYRLRAALQTFSPAEKRVAMTLIADYPITGLKTLVEIANAAGVSPATVSRFAETLGFTG 67 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 FP + AL E +A++ SP + K + T+ ++ Sbjct: 68 FPDFQRALHEDVAARFSSPGLQFDKTPERGADSGR-PHASAKALGKLVTETVASVERREV 126 Query: 123 HECVTMLRSARRI-ILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATV-QASSPD 180 + L +R G SG +A+ F +L + ++A Sbjct: 127 ELLIEKLIDPKRTVYFLGGRHSGSLARYFQQQLHHLRSRTVLFDGVNADAIDALIEFDAR 186 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +L+A + + + V T + + AS + Sbjct: 187 SVLIAFDFRRYQHDTTRFVAAASARRAHVAVFTDPYMSPAVKHASQVFLCRTATTS---- 242 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + L D L L ER+ E++ ++ Sbjct: 243 PFDSYASGLALIDFLTQELATAFGAAGHERVSKLESVREEF 283 >UniRef50_Q1ZB96 Transcriptional regulator n=1 Tax=Photobacterium profundum 3TCK RepID=Q1ZB96_PHOPR Length = 280 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 41/285 (14%), Positives = 94/285 (32%), Gaps = 12/285 (4%) Query: 1 MNGLLRIRQR--YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 M+ I L +++++ Y + +L + GV ++++ +F Q L Sbjct: 1 MDKKDFINAVNGLGALTVAEERITQYFMKHYTMLPFAKIDELCKQIGVGKATLGRFLQHL 60 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 G+ GF K +++ + ++ + K E M T S Sbjct: 61 GFSGFLEFKKHVADE--LAQTLTTPVERYEVTQHTDNESILTKHYDEVMFNMTKTFASIS 118 Query: 119 EEKLHECVTMLRSARRI-ILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQA 176 ++ + +++ + + G +S +A F + + + D+ L + Sbjct: 119 DDDFERAIRYMQNPKGKLYVMGSASSEALANYFFLLARYLRKDVVWLKADISTLPHQLAD 178 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 + DD L AISY + GG+++ +T N + + Sbjct: 179 VTEDDTLFAISYHRFSTITIRLVKWFHQFGGRIIFVTDQPVNPFVAYCDIQFAVESGSE- 237 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + L + L +Q + R E++ + Sbjct: 238 ---GFFNNRSSGFALIEAFIKGLSRQKEK--NNRFNRIESVFDEF 277 >UniRef50_D2BNU3 Transcriptional regulator, RpiR family n=4 Tax=Lactococcus lactis RepID=D2BNU3_LACLK Length = 248 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 97/251 (38%), Gaps = 21/251 (8%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 ++ L + + + D+++ P+ + ++ + LA++A VS S++V+ KLG++G+ LK Sbjct: 6 EQISKLNELETLVFDFIIKSPEEVQQMTIRDLASQAHVSTSTIVRLCTKLGFEGWSDLKF 65 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L L + + ++ +N A KL+ M Sbjct: 66 YLKNQLKEKTPEEQHYDNMLEFNM-----FLRRMNTDNYQA-----------KLNNAAQM 109 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + A + G+G SG +++ + G + + D + + + + +S Sbjct: 110 IAKADYTVFLGLGTSGSLSEYATKYFVNTGLRSFVISDPFQAVQVQGM--GNVVAVIMSV 167 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL---YTIAEEQATNSASISAC 245 +G ++ E G K+++IT + + A + L + +++ Sbjct: 168 SGETEQVVNKELEFKAGGAKIISITNNEDCTVAKLADYQLSYNLVNEWSKQYPLGNLTTQ 227 Query: 246 HAQGMLTDLLF 256 + ++L Sbjct: 228 LPVLAILEILA 238 >UniRef50_A3K8P8 Sugar isomerase (SIS) n=2 Tax=Rhodobacteraceae RepID=A3K8P8_9RHOB Length = 291 Score = 132 bits (332), Expect = 1e-29, Method: Composition-based stats. Identities = 52/280 (18%), Positives = 109/280 (38%), Gaps = 11/280 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R+ Y + + +++LAD LL +L++ LA++AGVS+++ + ++LGY G Sbjct: 16 IAQRLLSTYDEMPRGERRLADLLLEDVGVLGYLTASDLADQAGVSKATAARLFRRLGYHG 75 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + + + E +++ +P VP + + + + T E++ Sbjct: 76 YRDAQREVRENKSTKAAAPEVPALSGGFLSPG------EYLDAEVKHLVRTFETLPAEQM 129 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHAL-LATVQASSPDD 181 E V +L A ++ + G G +A L+K+ + + + +P+D Sbjct: 130 SEAVEILCRAAKLWVVGFGEGYPLALFARALLIKVFPDIRMIPLSGFPVPEEFASINPED 189 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +LA E R G KV+ +T ++ A L ++ Sbjct: 190 AVLAFGVGRRTDEFRNVIGSSRRAGAKVILVTNSIAAGDKRGADLIL----RGRSEGPTV 245 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + A L L + + + A R+ H E++ + Sbjct: 246 FGSMTAPLSLVTYLCARVATRTGDSAQRRLDHIESIHSQW 285 >UniRef50_B0NY53 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NY53_9CLOT Length = 266 Score = 132 bits (332), Expect = 1e-29, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 105/278 (37%), Gaps = 21/278 (7%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N I++++ L ++D ++ Y++ + + +S QQLA VS +++++FA+KLG+ Sbjct: 5 NMEELIQKKFDILNENDLQIWAYIVRHKEQCKQISIQQLAVFCHVSHTTILRFAKKLGFS 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ ++ L ++ EK + N + A + + Sbjct: 65 GYSEMRSFLKWEDKAEILYE------------------EKDMDRNANSFIANIRRFEDMD 106 Query: 122 LHECVTMLRSARRIILTGIGASG-LVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + M+ SA RI G G++ L AQ+ K + G + + + + Sbjct: 107 MDKVCQMIESASRIYTQGSGSTQKLAAQHLKEKFLYQGIFINTIEGASEFEFLSEKFTEE 166 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE-QATNS 239 DL++ S +G + G K++ I A L +EE Sbjct: 167 DLVIFYSLSGQNEKQIRKMRSAKESGAKIIGIAMQGKGEFYDLADEVLTFQSEEIHTIGY 226 Query: 240 ASISACHAQGMLT-DLLFIALIQQDLELAPERIRHSEA 276 + + + L + ++ L+ ++E Sbjct: 227 GFLYYPTLHFHIVNEFLTLKYMEHQLKKQEAITENNEE 264 >UniRef50_C3RJ39 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RJ39_9MOLU Length = 270 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 46/264 (17%), Positives = 97/264 (36%), Gaps = 3/264 (1%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + L ++K +A +LL + +L+S +L ++ SQ++V + +KLG+ Sbjct: 1 MIIEHLLDD--NNLTNTEKSIAQFLLNKDQKINNLTSSELGKQSYTSQAAVTRLYKKLGF 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F L + +P + + L + + AM T + + Sbjct: 59 NNFREFLSTLILERNDYLKYNDLPTEHPEQYFTSLEDTEKVIASLYEKAMIQTNRLLDKN 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ + SA I + GIG S +A+ +KL +G + ++ Sbjct: 119 VVNRVCNRILSASFIDIYGIGLSDTIAKEMCFKLQSLGLPCSYQNGINIKYIDNMQQHQS 178 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 ++ + I+ TG + A + + I G L Q L + Sbjct: 179 NVSILITTTGDNNLIKEIAKILKNRNVYTVGILGKKGKDLIQLCHDYLLFDT-SLFEDID 237 Query: 241 SISACHAQGMLTDLLFIALIQQDL 264 S+ A + + ++L+ L+ + Sbjct: 238 SLCATFSAEYVINILYATLLYRLE 261 >UniRef50_A1WL40 Transcriptional regulator, RpiR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WL40_VEREI Length = 285 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 57/264 (21%), Positives = 107/264 (40%), Gaps = 8/264 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + QR+ GL + A +L+ P+ A + + L+ AG+ S +++ A+ LGY G Sbjct: 13 LKELVTQRFDGLPVRLQAAARHLVDHPNAAAVDTIKSLSGAAGLQPSVLMRLAKTLGYSG 72 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLR---LVGEKLIKENTAAMYATLNVNSE 119 F ++ +AL SQ +S + + R + + L + + ++ + Sbjct: 73 FSEMQSVFRDALLSQTQSYGERMRTRGRRATAPQASGDMLRLLCEGSIESLQGLRDAIDA 132 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASS 178 + L + + +L AR I + G+ + +A + L + + M L VQA Sbjct: 133 QSLRDAIEILAGARSIHVLGLRRAWPIATYLVYLLSRSRRVVRLLGGMAGMLPDEVQALQ 192 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P D+L+AIS+ + A + G V+A+T + + A L E Sbjct: 193 PGDVLVAISFHPFHADTVAAVERAHAQGVSVVALTDGALSPFARHARTVLEVRDAE---- 248 Query: 239 SASISACHAQGMLTDLLFIALIQQ 262 A A L L + L+ + Sbjct: 249 IAGFRTVAASMALCHGLAVGLVMK 272 >UniRef50_A4JPM3 Transcriptional regulator, RpiR family n=11 Tax=Burkholderia cepacia complex RepID=A4JPM3_BURVG Length = 292 Score = 132 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 47/278 (16%), Positives = 104/278 (37%), Gaps = 7/278 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + + S++K+A LL + + A +A VS +V +F ++G+ Sbjct: 4 SIRALLLSQMDSFTPSEQKVAHALLDRYPSLGLGPIASFAKQAEVSDPTVFRFVVRIGFP 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + + + AL + + + SP + +R + + + ++ T++ Sbjct: 64 NYSSFQQALHDEIDAAMNSPLARMDA-FHSKTGMRDSHAAIFERLSQSLATTIDGLDAAA 122 Query: 122 LHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASSP 179 V +L + + G G + +A F++ L + V + ++ P Sbjct: 123 FDAAVALLAAPEVRVFCGGGRYTAPLASLFSFTLAYARPHVHYVEPNVNVASVSLADMEP 182 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+L+ + +++ A +G +VL IT + + A L + Sbjct: 183 GDVLVIFDFRRYQKDSVRFAQAAHALGVRVLLITDEWRSPISAFAEIVLRILGRP----F 238 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 A + L + L I + + ELA +R+ E L Sbjct: 239 AMLQTNVPALALAEALVIGVTNRLPELARQRMEKIERL 276 >UniRef50_B5ZFL0 Transcriptional regulator, RpiR family n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZFL0_GLUDA Length = 285 Score = 132 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 46/272 (16%), Positives = 94/272 (34%), Gaps = 8/272 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 IR RY L + ++AD ++ PD + +A+ AGV S++++FA+ G+ G Sbjct: 18 LRDDIRARYDSLPKRLAQVADAIMAAPDDFTFGTVSSVASVAGVQPSTIIRFARAFGFHG 77 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDD---PLRLVGEKLIKENTAAMYATLNVNSE 119 F +++ E L + + + D P ++ E ++ Sbjct: 78 FSDMQVVFRERLRGRASTYQARLDALRGPDGASPPATMLLEGFAHALEQSLTRLRASIDA 137 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFN-AAAVRDMHALLATVQASS 178 E+L +L A + + G+ S VA ++ L K+ ++ Sbjct: 138 ERLERACAVLAEAETLFVLGLRRSAPVADYLSYLLNKLSIRHVDVRSATGMEDEIASFAT 197 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D + ISY+ R ++ VG + +T + + + Sbjct: 198 HRDAAIVISYSPYARRTIEVFNQFQAVGVPTIVLTDSPFSPVVPAGGLWFEI----LEQD 253 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPER 270 + A L L ++ + +R Sbjct: 254 FQGFRSNAAATALVMTLATSVAKIRDVKGRKR 285 >UniRef50_B6GCS3 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCS3_9ACTN Length = 256 Score = 131 bits (330), Expect = 2e-29, Method: Composition-based stats. Identities = 44/263 (16%), Positives = 92/263 (34%), Gaps = 11/263 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + +R+ L +S+ K+A +L P+ S LA G S S++++ QKLGY Sbjct: 2 MNPIDELRRALPTLTKSESKVAGQILKDPNIMLGNSITNLAKVTGASNSAIIRMCQKLGY 61 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF + + + A+ + +L++ + M S + Sbjct: 62 DGFAEFRFSFNRAMMAAESPSV----------GTPDDDSRRLLETYSRYMNMIPQRVSID 111 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + A+R+++ G + A + +L ++G D+ + Sbjct: 112 QFDRLAGAIVGAKRLVIWGCNRTFQSAMQLSHRLTRLGIFNKPTNDVIVMSDDAAILEKG 171 Query: 181 DLLLAISYTGV-RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+ + S G + D M G V +T + + A + Sbjct: 172 DVCIVFSMQGRGNARYSEDMDLMRERGVDVHLVTMDRHSCMLSHADTAYVLPWISHDDSI 231 Query: 240 ASISACHAQGMLTDLLFIALIQQ 262 M ++L + + ++ Sbjct: 232 NFFEDQIIVYMFIEMLLLNVSKR 254 >UniRef50_C9AB15 Phosphosugar isomerase transcriptional regulator n=3 Tax=Enterococcus casseliflavus RepID=C9AB15_ENTCA Length = 257 Score = 131 bits (330), Expect = 2e-29, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 89/262 (33%), Gaps = 19/262 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I+Q L++ D+ + +Y+ DT + +L+ + VS+SS+++ +KLG+ Sbjct: 1 MKLQYLIQQHQSELSELDRGILNYIFSNGDTVLSMGIVELSEQVHVSKSSILRLTKKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ K L + + ++ ++ATLN Sbjct: 61 SGYSEFKYFLRHQQEQTTTISQQ----------------KTIFEKQQEDIFATLNYVKTV 104 Query: 121 KLHECVTMLRSARRIILTGIGASGLVA-QNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 L + ++ I G S A + F+ ++ + + + + + Sbjct: 105 DLAALNCLFDRSKTIYCYPTGFSQKKALEEFSKMMLSMEKRVIVLPNKTEFDMVMPMITA 164 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +D ++ S +G + VL ++ N + ++ L + Sbjct: 165 EDCVIIASLSGETENVKENLTTFAIRQIPVLTLSAPGDNYFARHSTFHLTYYCDFFQIGR 224 Query: 240 ASISAC--HAQGMLTDLLFIAL 259 I + L D L + Sbjct: 225 KKIPSQSLIGLSCLIDYLIRSY 246 >UniRef50_C3RHW9 Phosphosugar-binding transcriptional regulator n=2 Tax=Bacteria RepID=C3RHW9_9MOLU Length = 248 Score = 131 bits (329), Expect = 3e-29, Method: Composition-based stats. Identities = 55/252 (21%), Positives = 104/252 (41%), Gaps = 22/252 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M R+ Q+ L +D + DY+ HLS Q++A + + +S+++ +KLGY Sbjct: 6 MKFEERVLQQEFTLNDTDDLIVDYIRKNKANLEHLSIQKVAEDLYLVPNSIMRLCKKLGY 65 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGF +K ++ ++ + +KL+ +N ++ + + + Sbjct: 66 KGFAEMKFLVNNEVSENLD-------------------IQKLLSKNLY---KSMELINYK 103 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L E +++AR G+G S + L + A + + ++ Sbjct: 104 TLEEVAAKIKNARTCHFIGVGESLYFCEMMVDNLRCYDYRAEYYQTYREIEYRIKHCEEK 163 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L IS +G LN +E + G V+++T F N L A LY +EQ N Sbjct: 164 DILFVISASGENGRLNNWVEEAKQNGIFVISVTHFNENRLAGLAHIPLYYWGDEQKLNGY 223 Query: 241 SISACHAQGMLT 252 +++ ML Sbjct: 224 NVADRTGMMMLL 235 >UniRef50_C7M1X3 Transcriptional regulator, RpiR family n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M1X3_ACIFD Length = 279 Score = 131 bits (329), Expect = 3e-29, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 107/283 (37%), Gaps = 12/283 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + R+R+ L + +++A+ +L + +A A VS +V++F KLG+ Sbjct: 3 SLAERVRRVAPELGPAQRRVAEAVLREYPVVALERLADIAALADVSPPTVLRFVAKLGFS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + A E + + SP + + G + LI + + + + Sbjct: 63 SVEEFRSAAREEIGERLASPLERLE--VTGPGDVGSAEADLIDQI----RRSFVGLAPQS 116 Query: 122 LHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASSP 179 L VT+L RR ++ G S +VA++ AW L + + V A + + Sbjct: 117 LDTVVTLLADVRRPVVVSGGRVSDVVARHLAWTLEVLRPSVRHVPPEAGARVNALLDVDA 176 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 ++A + + E + G V+ +T + +S L T + Sbjct: 177 STTVVAFDFVRYQLETARFVTAASQAGATVVLVTDPGLSPAAPGSSVVLTTQVDGPGI-- 234 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 A L + + A++Q+ E A R+ E L + LV Sbjct: 235 --FDALTPALALVEAIIAAVVQRIGEPARRRLARYEELTRALV 275 >UniRef50_D2EJM8 Phosphosugar-binding transcriptional regulator n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EJM8_PEDAC Length = 249 Score = 131 bits (329), Expect = 3e-29, Method: Composition-based stats. Identities = 40/261 (15%), Positives = 94/261 (36%), Gaps = 24/261 (9%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M +R + L ++++ + +Y+L+ ++ LA +++ +F +KLGY Sbjct: 1 MKFAIRAQNLEYKLTETEENIVEYILVHQAEVINMKIVTLAERFFTVPNTITRFCRKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK+ L L + + A + + E+ Sbjct: 61 GGFTELKVELRHELLEKQTG-----------------------NQQLALIEENFGLVDEK 97 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + +L+ AR + + L+A+ + + + + + Sbjct: 98 REIKLAKLLQKARLVNFYAQDQTHLIAELGVECFQVLDSKFQLL-GYEKEVLSRINNGAG 156 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ IS +G + A + G +V+++T + N+L A +Y + E Sbjct: 157 DVFFFISISGETPAIVNLAKKAKERGHQVVSLTNLSNNSLSAIADVAIYCLTEVTYIAGI 216 Query: 241 SISACHAQGMLTDLLFIALIQ 261 ++ ++ LF ++ Sbjct: 217 EVTDKTPMFVILQSLFQRYLE 237 >UniRef50_D0Z271 Transcriptional regulator n=6 Tax=Vibrionaceae RepID=D0Z271_LISDA Length = 285 Score = 131 bits (329), Expect = 3e-29, Method: Composition-based stats. Identities = 44/286 (15%), Positives = 99/286 (34%), Gaps = 11/286 (3%) Query: 1 MNGLLRIRQ--RYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 MN I +Q + ++++++ Y + +L + GV ++++ +F Q+L Sbjct: 1 MNKQDFIDAINHFQSMTDAEQRISQYFMANYSVLPFAKIDELCKQIGVGKATLGRFLQRL 60 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLR-LVGEKLIKENTAAMYATLNVN 117 G+ GF K ++ L +P + + E + + T + Sbjct: 61 GFVGFIDFKKQVTAELTHTLTTPIERYETDNGDLGSSENNLLAQHHTEVLSNLDKTFHNI 120 Query: 118 SEEKLHECVTMLRSARRI-ILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQ 175 ++E+ + ++R + + G +S +A F + + D+ L + Sbjct: 121 TDEQFESALELMRQPKGKLYVMGSASSEALATYFYLLARYLRREVILIEADISKLPHQLV 180 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 DD+L AISY + GG ++ +T N + + Sbjct: 181 DVGKDDILFAISYHRYSSVTVRLVKWFHQHGGSIIIMTDQAVNPFAAYSDIQFVVES--- 237 Query: 236 ATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + A + + L L + R + E L ++ Sbjct: 238 -AGNGFFNNRTAGFAVIEGLIKGLSIHKEKE--NRFQRIEGLFEEF 280 >UniRef50_C8WCY0 Transcriptional regulator, RpiR family n=3 Tax=Zymomonas mobilis RepID=C8WCY0_ZYMMN Length = 305 Score = 130 bits (328), Expect = 4e-29, Method: Composition-based stats. Identities = 52/282 (18%), Positives = 112/282 (39%), Gaps = 10/282 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + I Q + Q+++++A L A + +L +A VS +V++F KLG+ Sbjct: 12 NLAILIHQASENFTQAERRIAQILFASDMMAGLETVAKLGAKAKVSGPTVLRFVSKLGFS 71 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKE----NTAAMYATLNVN 117 FP + +L L + + + R +++E M+ TL Sbjct: 72 SFPEFQASLRGELYQKLIYNTPQNQDDTANHVSDRPAVASVLQEADSFFENCMHRTLQQI 131 Query: 118 SEEKLHECVTMLRSA-RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLA-TVQ 175 + +L + +L R + + G + +A+ F ++L ++ V++ + Sbjct: 132 NACELEDVTELLADCSRNVYIVGNHLTHPIAELFWYQLHRLRPRTHLVQNNAFTPYEQLI 191 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 S D+LL + ++ L A++ + ++ IT + + + A H L Sbjct: 192 DSGRRDILLLFDICHYQEDIALLAEQAHQRRTTIILITDPKLSPVSRLAHHVLTC----D 247 Query: 236 ATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 T S + ++ +LL +L ++ A R ++ E Sbjct: 248 FTLFTSHESLVPCLVMVELLAASLEKKLGADALIRQQNIEKA 289 >UniRef50_C6BI14 Transcriptional regulator, RpiR family n=6 Tax=Ralstonia RepID=C6BI14_RALP1 Length = 302 Score = 130 bits (328), Expect = 4e-29, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 94/279 (33%), Gaps = 5/279 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + +R R L+ ++ A L LS + LA + ++ + A+ LG+ Sbjct: 6 LMQTLRDRAADLSPQLQRAAMLLETHQRDIALLSMRDLARRCDLPPATFSRLARALGFDD 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F AL+ L Q + + D E++ + + + + + L Sbjct: 66 FAALRDVCVNHLRQQADGFAGRASALQGEDAAGASEAERIGMAIGSHVQSAFSPANMAAL 125 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLAT-VQASSPDD 181 L ARR+ L G + + F + LA ++ D Sbjct: 126 DIVAAALCRARRVYLLGARSCLALTHAFGYAAQLFDDKVTLCAGSGNTLADPLRFCGEGD 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++A+++ RE+ A G +++ +T + A L + Sbjct: 186 IVVAVTFDPYTREVIEAMQYAHARGARLVYVTDSAIAPGAELAWQHLVAPVAIPSF---- 241 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + A L D L + + A + S+A +K+ Sbjct: 242 FHSLAAPMALLDALLMTWFRHAGPAALTHLADSDAQLKQ 280 >UniRef50_B9J832 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9J832_AGRRK Length = 340 Score = 130 bits (327), Expect = 5e-29, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 110/277 (39%), Gaps = 5/277 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N RI +GLA +++++A + + Q S+ Q+A AG S ++VV+ A+ LG++ Sbjct: 51 NFDARILAAIEGLAPAEQRMARFFIDQKQAVLLNSAAQIAELAGASDATVVRTARALGFE 110 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 AL+ AL L + D + +I + A+ + Sbjct: 111 SLSALRAALLSELTGTSTPGNRLERTLAETDGDAAGILHHVIGIHETALDVLKRPETAAS 170 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQASSPD 180 + +L +A + + GIG SG +A + + +IG + AL + Sbjct: 171 FTRAIDILAAANQRHVFGIGPSGAMADYASLQFNRIGLPTYPLSASGIALADRLLWLGRG 230 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D +L ++Y + RE+ + ++ R G V+ I+ + + + L + Sbjct: 231 DAVLMMAYAPLYREVEVVLEQASRHGVPVILISDNLGPLVADKVAEILPVPRGKADH--- 287 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 ++ +L + + L + A + + H L Sbjct: 288 -LAMHAGTMVLIEATIVGLAAHRRQAAFDSLDHLSTL 323 >UniRef50_C4XE43 Putative uncharacterized protein n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XE43_MYCFE Length = 297 Score = 130 bits (327), Expect = 5e-29, Method: Composition-based stats. Identities = 46/269 (17%), Positives = 116/269 (43%), Gaps = 8/269 (2%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L +S+K++ D++ + S +LA S + V +F +K G+K + +++ Sbjct: 28 ELTKSEKRIRDFINNFEGNYFNFSQNKLAKNTESSDAGVSRFIRKYGFKDYRTFIASINN 87 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 L ++ ++ +D + + + A+ + + + +++ ++ + Sbjct: 88 KLTEFEKTYPTIWNDNEVDND-----YKFIAASHRYAIDNVYDEDLLKDINKAAEIINKS 142 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVR 192 + I + G G+S ++ N L+KIG A D H ++ + +D+++ S Sbjct: 143 KNIYIHGCGSSQRISMNLVSNLLKIGKPVIAHSDFHIFFPSLAHVTENDVVIVYSNNLQT 202 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLT 252 E + ++ + ++ +T + + L + +T S+ AQ ++T Sbjct: 203 MEAHFVIEQAKKQKAPIIVLTSSQEED--KLIAVKLRYHKIQSSTMLVPSSSKIAQMLIT 260 Query: 253 DLLFIALIQQDLELAPERIRHSEALVKKL 281 DLLF A+++ + E + ++ + L+K Sbjct: 261 DLLFEAVLEHNKENTSK-LKKARILIKNW 288 >UniRef50_B9DVI9 RpiR family regulatory protein n=1 Tax=Streptococcus uberis 0140J RepID=B9DVI9_STRU0 Length = 258 Score = 130 bits (327), Expect = 6e-29, Method: Composition-based stats. Identities = 55/264 (20%), Positives = 111/264 (42%), Gaps = 16/264 (6%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ RI + L ++DKK+ + LL PD + + Q A S +++V+ A+K+GY Sbjct: 1 MDFKERISVNFTNLTKTDKKIYNCLLEHPDYLINHNVQDAAQLIETSPAALVRLAKKIGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG P LK+ L E+ + P + + K++ + + E Sbjct: 61 KGLPDLKIGLEESSQKNQKEPKRQS----------KKIMSKVLNNYRDNIALLESQLDEG 110 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +LH L S+ I + GIG+SGL A+ + L+ ++ + + + + Sbjct: 111 QLHRIAKKLASSDLIKVLGIGSSGLSAEQLVYSLLYQDKYTESITSKTKMYYLSRTLTKE 170 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +LL + TG ++ + VG +V+ +T ++Q A+ + + + Sbjct: 171 HVLLFYTVTG-NKDFEELFEAAKAVGCQVIIVTMVDSPYIRQYATELIVLPSNVMQLRNP 229 Query: 241 S-----ISACHAQGMLTDLLFIAL 259 S + +L+++L + Sbjct: 230 SGDFYQLDNRSLFLILSEILAAYV 253 >UniRef50_B1HYT1 Transcriptional regulator n=2 Tax=Bacillaceae RepID=B1HYT1_LYSSC Length = 291 Score = 130 bits (327), Expect = 6e-29, Method: Composition-based stats. Identities = 41/278 (14%), Positives = 112/278 (40%), Gaps = 7/278 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ I++R+ L++ +K+A +++ P+T + ++ A VS+S+V++F + Sbjct: 4 MSIREDIKKRFVRLSKGQRKVAQFVMDNPNTVIANGAAEVGRLANVSESTVIRFCYAMDL 63 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ L+ + + SQ ++ + K+++ ++ + T+ + +++ Sbjct: 64 SGYVELQEEIRGYIMSQDVGTNLQSTYTGNKL--VNSSFGKVMQRDSRNIQETIQLINDQ 121 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNA-AAVRDMHALLATVQASSP 179 ++ + A I + G + +A + L + N D ++ + Sbjct: 122 QIQTSSKWMHEAENIYILGTREAVSIANWLSNTLKTLRSNIKQLRIDSDEIMNQINNMGE 181 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 L+ +S+ +++ + K++AITG + +++ A+ + + Sbjct: 182 RTTLIVLSFDQQLKDIQTIVEIAKMKKVKIIAITGTAFSPVREYANILFALGTNKHS--- 238 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 S+ L +I QD + + +E + Sbjct: 239 -SLDIVPVLFSFLHALLEEMINQDKGQYEKYQKSNEQV 275 >UniRef50_A8S127 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S127_9CLOT Length = 285 Score = 130 bits (327), Expect = 6e-29, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 111/288 (38%), Gaps = 13/288 (4%) Query: 1 MNGL-LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M L R+++ L ++ADY L + ++SS +A E GVS +S+++F++ +G Sbjct: 1 MTILAERLKE--SKLTNQQHRIADYFLKNEERIGNMSSMDVAREIGVSDASIIRFSRAIG 58 Query: 60 YKGFPALKLALSEALASQ-----PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATL 114 YKGF LK + +LA + + + G + + + ++ + T Sbjct: 59 YKGFTDLKNDIYNSLAGEASAAVRNMQLSDRFDVLSGKFNDQNIPDTFVELMNYNITKTF 118 Query: 115 NVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKL-MKIGFNAAAVRDMHALLAT 173 + N E M+ ++R + G+ VA +FA L + + + Sbjct: 119 HQNPVESYDALTDMILMSKRKYIIGLRGCMGVAGHFARLLGFAVNQVVTLPHNETEAMGI 178 Query: 174 VQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE 233 +Q P+D+ + S+ + + ++ +T + + Sbjct: 179 LQDIGPEDIFILFSFARYYKIDMFLINVAKSHKARICVVTDSPLAPMIPCSDISFIAETS 238 Query: 234 EQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + ++ M+ + + + +++ E +R + +AL + Sbjct: 239 HMSF----FNSAIGVEMIGEYIVTLVCRKNSEEYRKRAKERDALTTEF 282 >UniRef50_UPI000196AB39 hypothetical protein CATMIT_01159 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196AB39 Length = 243 Score = 130 bits (327), Expect = 6e-29, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 99/254 (38%), Gaps = 21/254 (8%) Query: 8 RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALK 67 ++ + + +D ++ +Y+L ++S ++LA+E S +S+++F +K+GY FP LK Sbjct: 4 EEKIKSFSTTDMRIYNYILKHSIQFPYMSIRELADEIPTSTASIMRFVKKMGYDSFPELK 63 Query: 68 LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 A + + D +K + E Sbjct: 64 YAYKKE-------EKEVSLYMVNDLDETIDCLKKFNTPYYQ-----------DLFKEIAY 105 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAIS 187 +L A II G+G S +A+ A + GF +AA+ D + + +++ +S Sbjct: 106 ILGDANMIIFDGMGDSAKIAEYAARRFSSNGFFSAALTDP---YQKISMDGTNIVVVMLS 162 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHA 247 +G EL A+ G ++ IT N L + + + + + +S + Sbjct: 163 ISGDTVELFRKANAYKAAGSTLITITASDDNTLAKMSDYHISYYINDVRNELSSHTTQVP 222 Query: 248 QGMLTDLLFIALIQ 261 + ++L + Sbjct: 223 ALSIIEILSNMTLH 236 >UniRef50_Q98JM0 Mlr1883 protein n=2 Tax=Mesorhizobium RepID=Q98JM0_RHILO Length = 297 Score = 130 bits (326), Expect = 6e-29, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 89/253 (35%), Gaps = 6/253 (2%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 + +++A ++ P + Q+A +AGV S++V+FAQ GY GF + E Sbjct: 49 HFPKRLRQVAIFMWQHPSDVALGTIAQVAAQAGVQPSTLVRFAQIFGYSGFSDFQGLFKE 108 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 + ++ + + ++ + A++ E + VT+L +A Sbjct: 109 HVKGSWPEGRGEPRTEVEPNAAMH-FLHGMVGASQASLGRIETGFDVESFEKMVTLLAAA 167 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIG-FNAAAVRDMHALLATVQASSPDDLLLAISYTGV 191 I + G + V + L + G N + L V D +LA+S++ Sbjct: 168 ELIYVIGSKRAFPVTAYLSLTLSQQGVRNVLVDNVGSSALDQVGCIGSRDAVLAVSFSPY 227 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGML 251 +++ IT T + L + L ++ A + A + Sbjct: 228 NSITPDLVAVAHERKARIVTITDSTFSPLIALSDSWLEV----VESDFAGFRSLAASLAV 283 Query: 252 TDLLFIALIQQDL 264 L + + Sbjct: 284 GMALVQGVAAKRG 296 >UniRef50_C5EHV8 RpiR-family transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHV8_9FIRM Length = 267 Score = 130 bits (326), Expect = 7e-29, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 94/254 (37%), Gaps = 10/254 (3%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 + L+ ++ + ++ + +S Q LA++ S +++++F +KLGY GF LK Sbjct: 4 AVIKSLSNNELNILKFVYEHGEDVPDMSIQALASQVCYSSATILRFCKKLGYSGFAELKY 63 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 AL A +P P + + + T + SE++L Sbjct: 64 ALRAAAKKEPSRPGTHKAQDFTTWMMMDSLCSDI--------EGTSKLISEDQLGRTFRY 115 Query: 129 LRSARRIILTGIGA-SGLVAQNFAWKLMKIGF-NAAAVRDMHALLATVQASSPDDLLLAI 186 S+ I L G + +++ F L IG N + ++ + LL+ I Sbjct: 116 FDSSCPIYLWAPGGITSILSDYFEKLLFSIGRQNVYKIESAKMGEHILRNVHTESLLILI 175 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S TG VL+IT +T N + A+ +++ A ++ Sbjct: 176 STTGNFGPTVRLGKIARMNDIPVLSITPYTSNEVAGLATVSFRFFTDQRENRGAEFTSRL 235 Query: 247 AQGMLTDLLFIALI 260 + + + + Sbjct: 236 PVFYVINSIIRCYL 249 >UniRef50_C6L8R9 Putative phosphosugar-binding transcriptional regulator n=3 Tax=Clostridiales RepID=C6L8R9_9FIRM Length = 289 Score = 130 bits (326), Expect = 8e-29, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 97/230 (42%), Gaps = 16/230 (6%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLS----SQQLANEAGVSQSSVVKFAQKLGYKG 62 IR +Y+ Q +K +AD+ + + + + ++ +A VS++S+ +FA+K G++G Sbjct: 12 IRTKYESFTQIEKCIADFFTDEERLSGYGTEELAAKNVAERLFVSEASLSRFAKKCGFRG 71 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + + ++L + + ++ + T N+ E ++ Sbjct: 72 YREMIYQYEKSLRDVRRKKHADNN------------IQMVLDLYQEVLNKTYNLVDETQI 119 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V + +A R+ + G+G+SG A + +IG + +++D + +P L Sbjct: 120 LHIVRCMNTANRVYVCGMGSSGQAACEMESRFARIGVDIDSIQDADRMRMQTVFMNPGKL 179 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA 232 ++ +S +G E+ E + + + T L+Q + + + Sbjct: 180 VIGLSLSGETEEVLYLLRESGKRKAQTVLFTANEREQLRQYCTEVVRLPS 229 >UniRef50_B0G8I7 Putative uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G8I7_9FIRM Length = 275 Score = 129 bits (325), Expect = 9e-29, Method: Composition-based stats. Identities = 46/275 (16%), Positives = 110/275 (40%), Gaps = 14/275 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + I++R L + +A Y++ PD +++ ++L+ + GV++ +++ LGY Sbjct: 1 MDIIESIKKRSTELTRKQYMVAKYMIDHPDEMAYITLKELSRDIGVTEITILNTCASLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHN------QIRGDDPLRLVGEKLIKENTAAMYATL 114 + F +K + + + ++ + + D V ++ E A+ Sbjct: 61 ESFTQIKYEFRKDIIQKQKTDVLDDSSVYTEKVPKYEHDNREKVLAEIGDEEVKAITDYW 120 Query: 115 NVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMK---IGFNAAAVRDMHALL 171 +K E ++ ++++I + G G S +A+ +L +G A + Sbjct: 121 KNIDLKKYFEAADLILNSKQIFICGRGISWTMAEYMKNRLSSCEVLGITANT-ELNDDVY 179 Query: 172 ATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI 231 + + + + LL+ IS+ + K+LAIT A+ Q A L Sbjct: 180 GMLTSLTEESLLIPISFPDYYFMTTKVTERARMQNAKILAITDRLDTAVAQCADLTLTAP 239 Query: 232 AEEQATNSASISACHAQGMLTDLLFIALIQQDLEL 266 + ++ + ++ +LL A+ + + Sbjct: 240 TMTRVF----LNTLTSPMLMLNLLTSAIKLKQGKT 270 >UniRef50_C6VKP3 Transcription regulator n=3 Tax=Lactobacillus plantarum RepID=C6VKP3_LACPJ Length = 248 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 47/264 (17%), Positives = 106/264 (40%), Gaps = 26/264 (9%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 L+ D + +++ + ++ ++LA A VS SSV++F +K+GY FP K++L Sbjct: 9 IDKLSGVDLAIYRFIVEHDEQIPYMRVRELARGAHVSNSSVMRFIRKIGYDSFPEFKVSL 68 Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 Q ++ + + + ++ Sbjct: 69 RSETPIQKPDAPGI--QFVQPSAFPADITK--------------------IIRLAAQLMV 106 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 +A I+ GIGAS + + + + +GFN+ V+D L ++ +++L+A+S +G Sbjct: 107 NADNIVFVGIGASAALGEYASRQTSSLGFNSYVVKDPFYPLLPQLRNTSNNVLVAVSVSG 166 Query: 191 VRRELNLAADEMLRV-GGKVLAITGFTPNALQQRASHCLYT-IAEEQATNSASISACHAQ 248 EL ++ + +++IT + + + + + L EE+ +++ Sbjct: 167 QTSELVEMLNDFVNNPEVNIISITSNLESTIARMSRYALTYRATEERIHQYYDLTSQVPC 226 Query: 249 GMLTDLLFIALIQQDLELAPERIR 272 + + L L + E+ R Sbjct: 227 LYIIEALLREL--RHQEVVQHRFE 248 >UniRef50_C9XKC4 RpiR-family transcriptional regulator n=3 Tax=Clostridium difficile RepID=C9XKC4_CLODC Length = 254 Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats. Identities = 48/273 (17%), Positives = 92/273 (33%), Gaps = 21/273 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + Y +DK + + +L + LS + A++ +S S++ +FAQKL Sbjct: 1 MKIEGLFNKYYNSFTANDKYICECILNHKEDCIKLSIDEFADKYHISTSALSRFAQKLQL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ L++ + ++ + + ++ ++ Sbjct: 61 PGYSELRVIIR-------------------LNETEVEYKNQSKHQLMDCYNKVIDDIEKK 101 Query: 121 KLHECVTMLRSARRIILTGIGASG-LVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++ A RII+ G G S V + + G V + A Sbjct: 102 DCSIMFERMKKANRIIVFGEGYSQERVVKEMKRIFLPTGKIIYDVYGYDMIQALNHFIKT 161 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD++ IS G + A EM G +++IT N L + LY + + + Sbjct: 162 DDMIFFISLNGDTSTIIDFAKEMRMKGTYMVSITKMISNPLARLCDENLYIQSISISVDK 221 Query: 240 A-SISACHAQGMLTDLLFIALIQQDLELAPERI 271 +L +LL+I R Sbjct: 222 QLDYDVTTPYFILIELLYIKYKMYLESEHIPRK 254 >UniRef50_C3RLW4 Predicted protein n=3 Tax=Bacteria RepID=C3RLW4_9MOLU Length = 271 Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats. Identities = 35/273 (12%), Positives = 88/273 (32%), Gaps = 8/273 (2%) Query: 2 NGLLRIRQRYQGLAQSD--KKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 + R+ +++D +A Y+ + QLA E VS +++ +F + LG Sbjct: 3 SLFYRLIIFLDTASEADTNYNIAWYMAHNFSKVAKMGISQLAKECYVSPATISRFCRALG 62 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 Y+ + LK S + + ++ D + + + A+ Sbjct: 63 YENYAHLKQECSSFASDSKKFNNLINVPLDMMKDKPQECTKYYSDQVCDAISKLSQRLDW 122 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + + + + + + G S A +F L+ + A + + + Sbjct: 123 NVIDKVLQAIHDSDSVAFFGTQFSHSAALHFQTDLLMLEKFTMAYMETERQIDCARLMDE 182 Query: 180 DDLLLAISYTG-VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 + + + ++ G R + + + KV+ +T + ++ + EQ Sbjct: 183 NSVAIIVTVNGFYARSNSKVLQYLKKSKCKVVLMTNNPGIDIGINVNYTIVLGDSEQRKI 242 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERI 271 +L+ + E+I Sbjct: 243 GKHT-----LLTAVELMSLRYYSLYYPGIQEKI 270 >UniRef50_B9KVH6 Transcriptional regulator, RpiR family n=2 Tax=Rhodobacter sphaeroides RepID=B9KVH6_RHOSK Length = 280 Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats. Identities = 49/265 (18%), Positives = 95/265 (35%), Gaps = 7/265 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + R+ + + + + A YL+ PD ++ +A AGV S++++FA+ G++ Sbjct: 13 DLCTRLAADLETMPKRLAQTASYLVAHPDEVAFGTTASIAEGAGVQPSTLIRFAKANGFE 72 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRL--VGEKLIKENTAAMYATLNVNSE 119 GF L+L E L + +S + + D + V I ++ Sbjct: 73 GFSDLQLLFRERLRDRNQSYDSRLATLGQDADQVPSRAVLNGFIAAGQESLAWLQRDMDL 132 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASS 178 ++ +L A + L + + L K+G + + + Sbjct: 133 DQFDAAAALLARAGTVYLVARRRAFPPLIQLRYALAKLGIRSEICGSVNGIDNDLLAFAG 192 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 PDD + IS+ + AA++M ++AIT + L A L + Sbjct: 193 PDDAAILISFAPYTAQTIEAAEQMRAQEVPIVAITDSRLSPLCTGAGARLLLA----EAD 248 Query: 239 SASISACHAQGMLTDLLFIALIQQD 263 A A L L +A + Sbjct: 249 YAGFRTSTAAMTLVMALSVATAEHR 273 >UniRef50_C5NW06 Transcriptional regulator, RpiR family n=2 Tax=Firmicutes RepID=C5NW06_9BACL Length = 255 Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 108/259 (41%), Gaps = 15/259 (5%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +++ Y L+ S+++ DYL+ Q D + +++ E VS S+V++ +KLGY Sbjct: 2 FFENLKENYDRLSISEQQAIDYLMKQ-DNIELTTLKEIKQEILVSSSTVIRACKKLGYNT 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK L + + + + L ++ + T+++ +++ Sbjct: 61 FIDLKYDLKMSKELAKNNNATSSNFI------------TLKEQLSVEFSRTMSILNQDDF 108 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + +ARRI G G+S +V +F KL I + + +++ + DD+ Sbjct: 109 DIFADKIINARRIFCLGSGSSYMVMSDFNRKLKLINLWSNDYFEHYSIKRIPDICTKDDV 168 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 +L S G +N + G VL+IT + L + + H + + N I Sbjct: 169 ILVFSLGGNTDVINDCVLAAKQNGATVLSITSLANSPLAKMSDHLIKVY--DAPKNRKKI 226 Query: 243 SACHAQGMLTDLLFIALIQ 261 + ++ +LF ++ Sbjct: 227 RSRLMLNVVGIILFETIVN 245 >UniRef50_C3W9G1 Predicted protein n=3 Tax=Fusobacterium RepID=C3W9G1_FUSMR Length = 260 Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 101/261 (38%), Gaps = 9/261 (3%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 L + R + + + +A+++L LS ++LA S S++ +F +++ F Sbjct: 8 LKKCRDNNELFPKIEVIIANFILDNHKIIPDLSIKELAQRCNTSTSTISRFCKRINGSDF 67 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 LK E V NQ ++ I + AM T N EK+ Sbjct: 68 KTLKEECRIYNNFLEEKEIVKPTNQRTLNESY-------ITDLFKAMKETSQANDIEKIK 120 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 + ++ A++I G S ++AQN + K M++G N + + + PDDL+ Sbjct: 121 NAIFWIKEAKKIFFFGTSFSNILAQNISEKFMRLGKNTICPLTISSQNNIITQIKPDDLV 180 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + IS++ ++N + + K + I+ + L + + I Sbjct: 181 VIISFSNNNFQINRIKRILRKKQIKTIYISSKQDSNYNNE--ITLLVSSLNYKEFESPII 238 Query: 244 ACHAQGMLTDLLFIALIQQDL 264 + + + L++ I+ Sbjct: 239 QEFSINYIINYLYLFYIESSY 259 >UniRef50_A1VUM9 Transcriptional regulator, RpiR family n=4 Tax=Comamonadaceae RepID=A1VUM9_POLNA Length = 303 Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats. Identities = 52/280 (18%), Positives = 117/280 (41%), Gaps = 8/280 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R+ + Y L+ +D++LAD ++ + S+ +LA AG S++S +F Q+LGY G Sbjct: 24 LDARLLKVYDQLSATDRRLADVVIARKKDLLAYSATELAGLAGASKASAARFFQRLGYAG 83 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F + + ++ Q + + ++ + A + + L+ +++ L Sbjct: 84 FSDFRQQVRAQVSQQSPLARIGRTPARP---SESASLQAHVQNDVARLGSLLDGLTQDVL 140 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASSPDD 181 + + +L ARR+ + G + A + L ++ + + + + + D Sbjct: 141 EQALELLVRARRVWIVGYRNGCMTAFYASALLSQVRHDVNLLNELSGREAEILADLNDKD 200 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +LLA+ + L G +VL +T +AL +A+ L+ ++ + Sbjct: 201 VLLAVDFRRRTSRLPRIVAAARSTGARVLLLTDTPLSALASQAAAILHCPSQTEQV---- 256 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + L + L ++ + + A R+ E+L L Sbjct: 257 FDSYVSAVSLMNYLATSMAARTRKQARARMSRIESLHAAL 296 >UniRef50_C9M9T3 Putative SIS domain protein n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M9T3_9BACT Length = 292 Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats. Identities = 50/266 (18%), Positives = 89/266 (33%), Gaps = 12/266 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N IR RY L + + AD +L P++ ++ + LA AGVS+ +V+ LG++ Sbjct: 4 NVTDVIRSRYGKLTKKQRLTADIMLADPESMAFMTLRDLAAAAGVSEMTVLHTCAALGFE 63 Query: 62 GFPALKLALSEA------LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLN 115 + LK + Q + + + ++ E Sbjct: 64 NYNQLKYEFRRYLTLKAKVDIQEQCGYPNMEVPSYELSEPAKLMAQICDEEAQVSRGFFE 123 Query: 116 VNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR--DMHALLAT 173 L M+ +R ++ G S VA + +L +G A + +L A Sbjct: 124 SVGPVSLLHAAEMIVESRVTLMAARGVSMQVADFLSMRLAIMGLPAVVMNTEQNDSLHAA 183 Query: 174 VQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE 233 + L+AIS + R G +L +T + Q L Sbjct: 184 LPLLGKGVALIAISMPDYYIMTTKVCEFARRQGASILGLTDHLKAPIAQYCDLLLTAPTA 243 Query: 234 EQATNSASISACHAQGMLTDLLFIAL 259 + I+ L +LL A+ Sbjct: 244 TRLF----INTIGPMLSLANLLSAAV 265 >UniRef50_UPI0001C31BBF transcriptional regulator, RpiR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31BBF Length = 295 Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats. Identities = 51/277 (18%), Positives = 99/277 (35%), Gaps = 8/277 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 I R+ ++S K +A Y++ D A ++++LA A S S+VV+F+Q LG++G Sbjct: 21 LSDYITARFDEFSRSQKDVAQYIVDHLDEAAFQTAEELARRASTSSSTVVRFSQALGFEG 80 Query: 63 FPALKLALSEALASQP---ESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 FP L+ A + +P + + E + + + T S Sbjct: 81 FPELQQAARDEYRRRPAGGADAAPNAVAAAPLFSLDQTEYETALATDHVNVEETARKLSR 140 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQASS 178 + + + +A ++++ G A L + A V L + Sbjct: 141 SDVEAAIEAIATADKVLIAGTDQMAFFASYLRHLLSLLDIRAEVVASPSQEALGRLSRID 200 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 L++ +S + +AIT T + + + A LY + Sbjct: 201 ESTLVIGLSAGRPHPLIARTMKLARHRRSPTIAITDATLSEVARLARTRLYYSSNSP--- 257 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 A + + A L L + +D + RI+ Sbjct: 258 -AYVRSHTALLSLIQALAYGVYSRDAQQYDMRIKAYR 293 >UniRef50_Q04H60 Transcriptional regulator n=2 Tax=Oenococcus oeni RepID=Q04H60_OENOB Length = 242 Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats. Identities = 38/256 (14%), Positives = 97/256 (37%), Gaps = 17/256 (6%) Query: 8 RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALK 67 ++ ++ + D+L+ D + + LA VS +SV++ +K+G+ F LK Sbjct: 3 QRNIFNFTSTETDIYDFLMSHKDEVIKSNLRNLAKTIHVSPASVLRCIKKMGFNSFYELK 62 Query: 68 LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 + D L + Y + + Sbjct: 63 FDFRN---------KLQAIQVYGQSDHLIDISRDFFNRPLLDQYQ-------NTITDIKN 106 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAIS 187 ++ +++ + GIG SG++A+ + + G N+ +D + ++ +++ +S Sbjct: 107 VIENSKMVFFFGIGTSGILAEYGSRQFANFGINSFYNKDPYYPFQLIEKDISSTVMVVLS 166 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-NSASISACH 246 +G E+ + + K+++IT + + + + + L E+ + + ++ Sbjct: 167 VSGETHEVIKQITSLKNLKCKIISITNTSYSMVAKLSDINLSYNIGEEVFPDEINATSQI 226 Query: 247 AQGMLTDLLFIALIQQ 262 L +LL L ++ Sbjct: 227 PVIFLLELLARELKKK 242 >UniRef50_C3RJQ3 Predicted protein n=2 Tax=Bacteria RepID=C3RJQ3_9MOLU Length = 258 Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 104/265 (39%), Gaps = 9/265 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 I L + ++ +++YL +PD ++++LA VS ++++F QKLG+KG Sbjct: 2 IRELIDSI--KLTKKEQVISEYLEQEPDCVLQYNAKELAALIKVSAPTLIRFVQKLGFKG 59 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + ++ ++ + +I +R V E L T + E Sbjct: 60 YSDFQVTYTQEKTM----YDQMKNIRIDSKSSIRDVIETLPAIYDHVFKETRKLTRFESF 115 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + A++I + Q+ KL IG A ++ P D+ Sbjct: 116 VRTINYMLQAKQIDFYANDNNYSEVQSACLKLNTIGIKAQCFNTLNTAYID--NIDPRDI 173 Query: 183 L-LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L +S++G + + AA E+ + +V+AITG L+ + LY + Sbjct: 174 LAFVVSHSGKNQTMVDAAYELRKKRIRVIAITGKIDPTLELVCNEALYIDSSSHHLPHHI 233 Query: 242 ISACHAQGMLTDLLFIALIQQDLEL 266 + + + D+L +L + + Sbjct: 234 MLYGLSIHYILDILVTSLYYKKYKE 258 >UniRef50_A9WLS8 Transcriptional regulator, RpiR family n=1 Tax=Renibacterium salmoninarum ATCC 33209 RepID=A9WLS8_RENSM Length = 214 Score = 128 bits (323), Expect = 1e-28, Method: Composition-based stats. Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 2/206 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + L + ++A + A +L+ +LA +A S+ +V++ + LG+K Sbjct: 3 DFQALVSAHLNELTPAAYRVASVITDNLGEAVNLTISELAVKAKTSEPTVLRVCRVLGFK 62 Query: 62 GFPALKLALSEALAS--QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+P L+LAL+ + E + D L V K+ T + TL Sbjct: 63 GYPQLRLALASEIGRIAGAEEGLGLPETALHPHDSLADVVAKVRFNETRGIDQTLAAADL 122 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L+ T+L A +I L G+GA LVA++ +KL ++G AA + H L Sbjct: 123 DNLNTIATVLDGAEKIHLYGVGAGDLVAKDMYYKLFRVGRQAAVYTNPHDALMGAALMGK 182 Query: 180 DDLLLAISYTGVRRELNLAADEMLRV 205 D+ +A S++G + Sbjct: 183 RDVAMAFSHSGTTVLTLDFITTAQKA 208 >UniRef50_Q02WG9 Transcriptional regulator n=6 Tax=Lactococcus RepID=Q02WG9_LACLS Length = 250 Score = 128 bits (323), Expect = 1e-28, Method: Composition-based stats. Identities = 48/264 (18%), Positives = 96/264 (36%), Gaps = 16/264 (6%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 L ++ + + LS +LA A VS S+V + +K G++G+ + ++ Sbjct: 1 MSNLTNAESYTWQIIQENYEKIPQLSISELAELAHVSLSTVNRTVRKKGFEGYGEFRYSI 60 Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 E + S + I +N + T+ S E++ + V +++ Sbjct: 61 REKKLPEINGFSKEVLGA--------------IAKNQEELLKTIENISAEEIEKAVELIQ 106 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 + I++ G S VA KL + D + Q + L++ +S +G Sbjct: 107 ESEEILIFSRGLSTNVADELMKKLQLFRKRVSLHDDSKYMAYYAQFVNEKSLIIVLSLSG 166 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL--YTIAEEQATNSASISACHAQ 248 E+ A K+L++T L + L Y + E + + + Sbjct: 167 ETVEILNALRIAKAQNPKILSLTVNANTNLTNLSDISLIGYKSSLEVNYFDLDVHSRLSL 226 Query: 249 GMLTDLLFIALIQQDLELAPERIR 272 +L+ +L A L+ IR Sbjct: 227 SILSRVLIDAYSIYTLKQGRSDIR 250 >UniRef50_C6CS19 Transcriptional regulator, RpiR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CS19_PAESJ Length = 277 Score = 128 bits (323), Expect = 1e-28, Method: Composition-based stats. Identities = 45/274 (16%), Positives = 102/274 (37%), Gaps = 12/274 (4%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L + +++ADY+ D + + +A GVS S+V +F ++G K K + + Sbjct: 8 KLTRGHQRIADYISKNMDDVPFMIEEDIAAACGVSVSTVSRFWAEVGSKNLKEFKQRVKD 67 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 + P +++ GD + + + + + ML A Sbjct: 68 EVLLSPARKLQSAFDKVGGDSGAAANVLSVAD----YLQQSADRIDQAAFDAAAAMLAGA 123 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSPDDLLLAISYTGV 191 + + G G++ + ++L + G + + H L ++ P+D+++ + Sbjct: 124 GTVHIYGPGSAECLTALMDFRLSRFGADVRRLDRGGHELFESMVPIRPEDVIVIFGFVSE 183 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGML 251 E+ + D G + L IT + + +A L+T + A + Sbjct: 184 SPEMAVLLDFARERGCRTLLITDLAVSPMLAKADISLFTARG----QLWEFHSMVAPIAV 239 Query: 252 TDLLFIALIQQDLELAP---ERIRHSEALVKKLV 282 + L +A+ ++ + A E + KL+ Sbjct: 240 IEALIVAVGKEWEQAALAGSEELHRLRRKYAKLL 273 >UniRef50_C4V4P0 RpiR family transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V4P0_9FIRM Length = 255 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 58/263 (22%), Positives = 93/263 (35%), Gaps = 25/263 (9%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RI + + L+++D+ + Y+ A S +LA VS +SVV+FAQKLG+ G Sbjct: 2 LTERINEHLRELSETDRSIWRYIDANRTAASRASIHELARACAVSSASVVRFAQKLGFDG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F +K + A P D T + Sbjct: 62 FGEMKAVMRMEAAPAAVPPQDVRSALSGFYD------------------QTWRALMQRDY 103 Query: 123 HECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 ++R A R+ G V Q + + QA+ PDD Sbjct: 104 TRASRLIRGAHRVFGYASGYVQTNVMQELKRLFFYDNIFIYEIAGREEFYSVYQAAGPDD 163 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT-IAE----EQA 236 L + IS +G A+++ G VL+IT N L R++ LY AE E Sbjct: 164 LFIFISLSGESARTVEFAEQLNLKGIPVLSITEMRRNTLASRSTENLYVMPAEFNLPENE 223 Query: 237 TNSASISACHAQGMLTDLLFIAL 259 + A +L ++ ++ Sbjct: 224 ARLQ-FKSMLAYFLLLEIWYVHY 245 >UniRef50_A3SJ61 SIS domain protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SJ61_9RHOB Length = 245 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 38/241 (15%), Positives = 76/241 (31%), Gaps = 7/241 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L I L + + A Y+L +PD S + +A GV+ +++ + A ++G+ Sbjct: 1 MELLENIGDALPDLPRKLARAARYVLDRPDHVALGSMRAVAQSCGVAPTTMQRLAHEMGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + + L Q V D + ++ + + + Sbjct: 61 DSYDKFRAVFQRELVGQGFGAKVDALQDNFSDLSQGKLALTHLESVRENLDSLQASLNGA 120 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQN----FAWKLMKIGFNAAAVRDMHALLATVQA 176 + + L +R + G +A + L + + Sbjct: 121 AVEDFARSLHRSRHCHIIAGGTLSWLASFTEVTGSMALSNL---VTPAGPAVDSTERIAH 177 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 P+D+LL IS + RE+ A + G K A+T + + H Sbjct: 178 IGPEDMLLVISVSPYAREIISALEYARDRGAKNYAVTDRPSSPVVPLCRHAFLAPTASPH 237 Query: 237 T 237 Sbjct: 238 Y 238 >UniRef50_A1BB42 Transcriptional regulator, RpiR family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1BB42_PARDP Length = 336 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 57/276 (20%), Positives = 109/276 (39%), Gaps = 5/276 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R +R L+ + +++A Y+ S+ ++A AG S ++V++ Q LG+ G Sbjct: 47 FSERYERRRDRLSPAFQRVAGYIDANRLAVLTSSAIEIARAAGTSDATVIRTVQALGFAG 106 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 L+ L+ L + ++ + + L+ A + + E L Sbjct: 107 LQELRRELAAGLGQRTTPADNLKRTLDDAEEQIDAAVDNLLDVYAAGLEVLRSAGFRENL 166 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSPDD 181 + ++ L ARRI + GIG + +A FA +L + G + A L + +P D Sbjct: 167 MKALSALNDARRIFVFGIGPTAHIAAYFAARLRRKGRQQQVIDRTGAGLADQLLELAPGD 226 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++ ++Y + +E N E R+ V+ I+ + L RA L + Sbjct: 227 AVVMLAYGSLYKEANATLAEARRLRLPVILISDSAQSELSSRAQVVLAVPRG----RNDR 282 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + ++L + L D E A + E L Sbjct: 283 FALHGVTVFCLEMLLLGLAAGDSEKALAALADLERL 318 >UniRef50_C5EP41 RpiR family transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EP41_9FIRM Length = 287 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 45/284 (15%), Positives = 105/284 (36%), Gaps = 13/284 (4%) Query: 5 LRIRQRYQ--GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R+ R + L +++ADY + ++SS +A E GVS +S+++FA+ +GY G Sbjct: 2 DRLSDRLKGAKLTPQQRRIADYFFKNQERIGNMSSMDVAKEIGVSDASIIRFARAIGYLG 61 Query: 63 FPALKLALSEALASQ-----PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 F LK + +L + + + G + ++ + T N Sbjct: 62 FTDLKNDIYNSLIGETSASVRNMQLSERFDVLTGRYQEDDIPGSFVEMMNYNITRTFQQN 121 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH--ALLATVQ 175 S E M+ +RR + G+ V+ +F L + ++ +Q Sbjct: 122 SLESYEALADMIIRSRRKYVVGLRGCMGVSSHFTRLLGFAIKGVVQMPGSSETEVVGALQ 181 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 +D+ + S+ + L + ++ +T + Q A L Sbjct: 182 DIDSEDIFILFSFARYYKIDMLLVNMAREHKARICVVTDSLMAPMVQYADIALLVETSHM 241 Query: 236 ATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + ++ M+ + + + +++ + +R + + + + Sbjct: 242 SF----FNSAIGVDMIAEYIITLVCRKNKDEYRKRAKERDTVTE 281 >UniRef50_C1IAA4 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IAA4_9CLOT Length = 245 Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 107/261 (40%), Gaps = 17/261 (6%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ R + ++KK+ +Y+L + ++ + +AN+ +S +++++ +KLGY Sbjct: 1 MSFYERFSNENIHINNTEKKIIEYILERANSFSKIKLTDIANDLFLSSNTIIRLCKKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK + + + H ++ TL++N +E Sbjct: 61 SGFSELKYDIINNNYEKVSDSNEHSHI-----------------TIQNSILQTLSLNKKE 103 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 EC T+++ + ++I+ +G S A +FA KL D A Sbjct: 104 TFKECATLIKDSNKVIIFSLGLSQYPALSFAKKLQYFNKICLVPEDRDATTLFANNLKDG 163 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL + +S +G + + + +++ITGF+ N + + LY ++ + Sbjct: 164 DLAIIVSSSGNTDIMRKISSIITTKNVSIISITGFSQNIVSHFSDISLYAYLKDYNIDGH 223 Query: 241 SISACHAQGMLTDLLFIALIQ 261 +++ ++ DLLF Sbjct: 224 DLTSRIGFNIIFDLLFEEYSN 244 >UniRef50_A8AMT2 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=A8AMT2_CITK8 Length = 319 Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats. Identities = 49/273 (17%), Positives = 106/273 (38%), Gaps = 9/273 (3%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 + Q L +S+ +L DY+ + L+ A VS++++ +F K+G+ G+ A Sbjct: 37 LTQNIGDLTESECRLNDYINKHFSELPYHGIVDLSQNAAVSKATIGRFLNKVGFTGYAAF 96 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDP--LRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 + AL L+ + +++ R + + E + T+ + S + L++ Sbjct: 97 RRALDTTLSKNKIAAPFEKNSRQRPKNTTKTEQIVETFNNKVTSLFNSFKQTISIDSLNK 156 Query: 125 CVTMLRSA-RRIILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASSPDDL 182 + ++ ++ R I + G +S +A +F L N + D+ L + PDD+ Sbjct: 157 FIELVLNSQRHIYVVGPSSSHAMALHFCTLLKYFRSNITLLPTDISELPKCLINIEPDDV 216 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L+ SY R A + V+ IT N + ++ ++ Sbjct: 217 LIVFSYYRFNRVALNIAKWFRKKNATVVLITNSDANPYGKFCDLQFVLPSDVESI----F 272 Query: 243 SACHAQGMLTDLLF-IALIQQDLELAPERIRHS 274 + +L+ +A + D E ++ Sbjct: 273 QSRILGFFFIELILHLAYEKSDNEGNFAQLEEL 305 >UniRef50_C0FQ68 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FQ68_9FIRM Length = 218 Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats. Identities = 48/216 (22%), Positives = 93/216 (43%), Gaps = 15/216 (6%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + I Y+ ++++ +ADY L D LS++ ++ E VS +S+ +FA+K GY+G Sbjct: 10 IIPTIEANYERYTETERHIADYFLKN-DAIGDLSAEFISTELAVSPASLSRFAKKSGYQG 68 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + + + ++ + + N+ E ++ Sbjct: 69 YREFVYEYRNSYVEKTTVEQEESRL--------------VLDTYQSLLNKVYNLLDEAQI 114 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 V LR A+R+ + G G+SGL A+ A + IG + A+RD + +P +L Sbjct: 115 KRIVEKLRMAKRVYVCGRGSSGLAAEEMATRFRWIGIDMVALRDNENIKMQSVFLNPQNL 174 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPN 218 ++ +S +G + E+ R G + IT T + Sbjct: 175 VIGLSLSGTKSEVLYMLARGCRQGADTILITEKTES 210 >UniRef50_D1AK32 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AK32_SEBTE Length = 278 Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats. Identities = 37/267 (13%), Positives = 106/267 (39%), Gaps = 2/267 (0%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + + + S +A LL +++ + +A + V+ S++ +F +K+GY Sbjct: 10 MSLINILEANLEK-GDSKAVIARVLLRNFYNIPNMTQEHIAKLSFVAPSTIGRFCKKIGY 68 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 K F + ++E + + D + +++ ++Y E Sbjct: 69 KNFIEFRKYVNEYIEKLKMDSMLSDAFYEVADKDVFSFSDEIFSSTMKSLYNAQKSIDIE 128 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + ++ S +I + G+ S ++ ++F + +++ G A + + ++ + Sbjct: 129 TIDKVTDLIISTEKIAVFGLPISQIMGKDFQYHMLRHGKYMEAFTEFKKQVELAESLDEN 188 Query: 181 DLLLAISYT-GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 L + IS T G R+ + + + + + + IT + + Q + + EE Sbjct: 189 SLAIFISKTGGERKFICDILNIVKKCKARTVLITYKQDSYMAQNSDFLINIFYEENGLIP 248 Query: 240 ASISACHAQGMLTDLLFIALIQQDLEL 266 + + + +L+ + +++ Sbjct: 249 RGLISGILYTGVFNLIIMNYLKKIKSK 275 >UniRef50_Q13FP6 Transcriptional regulator, RpiR family n=3 Tax=Proteobacteria RepID=Q13FP6_BURXL Length = 280 Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats. Identities = 40/281 (14%), Positives = 96/281 (34%), Gaps = 11/281 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + R+R L+ ++++LA+++L P ++ +L A VS ++V +F + LGY Sbjct: 7 SFVGRVRATMDALSATERRLAEFVLEFPGDLASYTAAELGKLANVSNATVSRFFRHLGYS 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + + + + + A + T S+ Sbjct: 67 SYEEARRHVRDDKKDGAALLLTGADAGQDEQG-----VAAHAQLGIANLTRTFAELSDAM 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSPD 180 L E + A+++++ G +S A F W+++++ A+ L + Sbjct: 122 LDEIAGAVVGAQQVLVFGFRSSQAFASYFRWQILQVVERVIALPGPGETLGEHLVGLDRK 181 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +++ + + + R G +V + + A+ + Sbjct: 182 SVVIVFGLRRRVPQTDAVIEYAARAGARV-LYVTDRSSPARAGATWTIICETSAP----G 236 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + A + L + QQ +R+ E+ L Sbjct: 237 PLDNHVAVLGVCGALATKVFQQASSQGRKRLSGIESAHDAL 277 >UniRef50_A8TQ66 Transcriptional regulator n=1 Tax=alpha proteobacterium BAL199 RepID=A8TQ66_9PROT Length = 288 Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats. Identities = 47/274 (17%), Positives = 100/274 (36%), Gaps = 12/274 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + +++ RY GL+ ++LA L P++ + +LA A V S++++FA++ GY Sbjct: 14 SLRHQVQARYDGLSPHLQRLARLALEDPNSFALETVTRLAQVAEVQPSTLIRFAKEFGYS 73 Query: 62 GFPALKLALSE-----ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNV 116 GF ++ A A + + + + + E+ + + + Sbjct: 74 GFSDMQKVFKLRLIEGAPAYREQIYQHRQRLEATAESDPMAILEEFTDASILCLERLKDT 133 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQ 175 S E L + + M+ +A I + G + +A A+ L ++ + + + Sbjct: 134 VSPESLAKAIEMMAAAEHIYVIGQRRAFPIAAYLAYGLARLEHRTQLLDFVGGMVPQQAA 193 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 P DLL+A+++ + ++ L IT + L Q + Sbjct: 194 TLRPTDLLIAVAFAEYTPAVVEVVRDVHIRNIPTLTITDVPTSPLAQHGTVYFCV----D 249 Query: 236 ATNSASISACHAQGMLTDLLFIALIQQDLELAPE 269 + L L I L + A + Sbjct: 250 DADIHRFRPISGSMSLAQSLIIGLS--YYKDARK 281 >UniRef50_Q2BDH7 RpiR-family transcriptional regulator n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BDH7_9BACI Length = 266 Score = 128 bits (321), Expect = 2e-28, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 91/252 (36%), Gaps = 9/252 (3%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L+QS+ + +L+ + + LS + A+E VS +S+++ +KLG+ G+ L Sbjct: 16 DLSQSEMDILSFLIKRKFEDKPLSIRNAADELYVSTTSIMRLCKKLGFSGYSEFIFNLGL 75 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 + + +S + + E+ +E ++ E + + + + Sbjct: 76 KIKNAHDSDHGSVVE-------IHSPLEESRQEFVRNFNSSFEALDENSIQAFLAEIEKS 128 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVR 192 +I G G S L + + KL G+ + + D+++ S +G Sbjct: 129 SKIYFYGAGFSTLFSNYLSKKLELFGYYVSNASTSDSRAIFFNNIQKYDVMIVFSRSGET 188 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT--IAEEQATNSASISACHAQGM 250 ++ G + + TG + + A E S M Sbjct: 189 GKVIEKMKIAKDKGIRTVLFTGNSRSTTANLADIVFSVLDPTIESQQEFQVTSYESNMFM 248 Query: 251 LTDLLFIALIQQ 262 + D++ I I++ Sbjct: 249 MIDIILILAIKK 260 >UniRef50_B9DUC4 RpiR-family regulatory protein n=1 Tax=Streptococcus uberis 0140J RepID=B9DUC4_STRU0 Length = 289 Score = 128 bits (321), Expect = 2e-28, Method: Composition-based stats. Identities = 53/264 (20%), Positives = 110/264 (41%), Gaps = 5/264 (1%) Query: 21 LADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPES 80 +A+ +L D+ LS + +A + S+SSVV+FAQ LG+KG+ AL Sbjct: 25 IAETILEHLDSIEQLSLEDIARLSFTSKSSVVRFAQSLGFKGWVDFLPALLSERIYADAH 84 Query: 81 PSVPIHN-QIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTG 139 S H+ DD ++ + +K+ ++ T + S+E+L + L A+RI++ G Sbjct: 85 YSNIDHSLPFNQDDSIKAIIQKIATIEKESIQDTADQLSQEELEKASQQLAKAKRIVVFG 144 Query: 140 IGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRR--ELNL 197 + + +A F K++ +G N T + S DD+ + ISY+G+ + Sbjct: 145 LSPNDYLAHLFKRKMLTLGKNIEIAHS-SEFGLTAASLSQDDIAILISYSGISEKNDTLR 203 Query: 198 AADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT-NSASISACHAQGMLTDLLF 256 + + + ++ + L++ ++ E + S + + + L+ Sbjct: 204 HLPLLEKNKVFRIGLSSQNGHYLKEHSNAFFQICTREDKHKKIGNFSTEESILFILNTLY 263 Query: 257 IALIQQDLELAPERIRHSEALVKK 280 + D R + ++ Sbjct: 264 AVYFKADYMKNYIRKLNLSQALEN 287 >UniRef50_Q98AI2 Mlr5989 protein n=1 Tax=Mesorhizobium loti RepID=Q98AI2_RHILO Length = 293 Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 105/277 (37%), Gaps = 6/277 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 I + + + A ++ PD S + LA+ A VS +++++ Q L + G Sbjct: 6 IQALILEMLPDMPRQLALAARHIADHPDQVLVHSMRDLASRASVSPATLLRLTQTLKFDG 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + + + L S P++ + + L + + A + VNS E L Sbjct: 66 WAEFRAVYARQLLSAPDAYAERASRALD-RSGLPALLHESFAAQRANLDHAAGVNSPEAL 124 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSPDD 181 +L A R+ ++ + FA+ + N + + L A + P+D Sbjct: 125 ARSAAILAEADRVFISAFMSCRGPGLTFAYLCRLLRDNVFLLGGEGSPLAADLALLRPED 184 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L I++ RE++ A + G K++ ++ + + A L E + Sbjct: 185 AVLTINFQPYGREIDGVARAVGEGGAKLVCLSDSRATQVTRVAREVLIFPVEGPSF---- 240 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 + A L + L IA++ + A RIR E Sbjct: 241 FPSLTAAHALVECLAIAVLTHLGDSATRRIRLIEDAY 277 >UniRef50_C2CHV1 RpiR family transcriptional regulator n=1 Tax=Anaerococcus tetradius ATCC 35098 RepID=C2CHV1_9FIRM Length = 268 Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats. Identities = 51/279 (18%), Positives = 106/279 (37%), Gaps = 20/279 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + IR+ Y L ++D ++ Y++ A LS +LA++ +S SS++ F +KLG Sbjct: 1 MILMNLIRENYSKLNKNDLRIYSYIVQNKSEANELSINELADKLDLSTSSIMTFTKKLGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +G+ L+ + + + I+ + T+ + S Sbjct: 61 EGYSELRYLIKWSEEEIQ----------------GSTFNDNEIEYTKNDINLTMTMMSSL 104 Query: 121 KLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 L L +A RI + G G VA+ + +G + V+ Sbjct: 105 NLDGLFESLNAAERIFVIGNGYVQHNVAEELKRNFLNVGKIVIIIDQASDYEQYVEMIGE 164 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+L IS+ G + L D + + +IT + N + R+ + + + E + Sbjct: 165 GDVLFVISFRGENKSLIDFLDRL-DKNVVIASITKLSNNTISHRSDYNIAFVTHEVFDFN 223 Query: 240 ASIS-ACHAQGM-LTDLLFIALIQQDLELAPERIRHSEA 276 + + +Q + D + + + A + R ++ Sbjct: 224 QRMKISPVSQFYVVIDFIILKYLSFIERKARSKKREAQR 262 >UniRef50_Q184P9 Phosphosugar-binding transcriptional regulator n=5 Tax=Clostridium difficile RepID=Q184P9_CLOD6 Length = 261 Score = 127 bits (320), Expect = 3e-28, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 90/271 (33%), Gaps = 21/271 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I Y L +D + Y+ +S +LA + VS++++ +F +KL Sbjct: 1 MRLEEMIFFNYNKLNDTDLLIWKYITANKKHCSKMSINELAMKCNVSRATITRFVKKLDL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGF K+ LS + + ++ + ++ + + Sbjct: 61 KGFSEFKVLLSWE------------------SEKVHVIENQSFDIACNSIIKYVEDQKNK 102 Query: 121 KLHECVTMLRSARRIILTGIG-ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 +L +R I G G +VA+ + + S Sbjct: 103 DYDALCKLLYESRTIYAYGSGDIQNVVAKQIKRMFLSCQEIIYDFEGRTFDDSFYNIVSK 162 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +D+++ IS +G A + +G K+++IT F N L + +Y A + Sbjct: 163 NDVMIIISLSGENENTLNIARRLKLIGTKIISITEFKNNTLTDLSDESIYISATNISFLQ 222 Query: 240 ASISACHAQGM--LTDLLFIALIQQDLELAP 268 S L +LLFI Sbjct: 223 MHPSYKLTMLYFILIELLFIKYSIYKRHRMI 253 >UniRef50_Q1AYI2 Transcriptional regulator, RpiR family n=17 Tax=Actinobacteria (class) RepID=Q1AYI2_RUBXD Length = 295 Score = 127 bits (319), Expect = 4e-28, Method: Composition-based stats. Identities = 53/273 (19%), Positives = 97/273 (35%), Gaps = 15/273 (5%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 L+ + ++LA Y++ PD A LSS +LA GVSQ SV + A +GY G+ L+ L Sbjct: 29 SRLSPTQRRLARYVMDHPDEALFLSSVELARRVGVSQPSVTRLAVAMGYGGYGELQRELR 88 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 + + EN A+ +L + E L + Sbjct: 89 AVALEGGGGGAGSEAPNKFQGAVRAEI------ENLRALERSLE--DTGAVEELGRELAA 140 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATV---QASSPDDLLLAISY 188 + + + G+ S +A F + KI + + + + ++ +L Sbjct: 141 SEPLCVLGLRVSAPLAGYFGYFAKKIHPDVRVLTEGGSAAFDALAQARAAGGAWVLCFLL 200 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 RE A +G +V + +++ + L + + A Sbjct: 201 PRHPRETLQAMSYARSLGLRVATVADRETGWIRELSDAVLPAEVGTRLV----FDSQAAA 256 Query: 249 GMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +L +L AL + A ER+ E +L Sbjct: 257 MVLAGVLLEALSDAAPKRAQERLEEFEQRAARL 289 >UniRef50_C9A4Z8 Transcription regulator n=4 Tax=Enterococcus RepID=C9A4Z8_ENTCA Length = 247 Score = 127 bits (319), Expect = 4e-28, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 104/261 (39%), Gaps = 26/261 (9%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ +I + L+++D+ + Y+ Q D ++ +++A E+ S SSV++F +KLGY Sbjct: 1 MSFFGKID--FNELSETDRAIYHYMSSQSDKIPYMRVREIALESHTSASSVMRFIRKLGY 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + F + VP + + + ++ + + Sbjct: 59 ESFTEFRTQFK-----------VPELDAVSFYSSMNVLNAEHFPRDIE-----------G 96 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 K+ + II GIGASG + + A + IGFN+ A+ D + + D Sbjct: 97 KIRRIAERMLECDNIIFYGIGASGSMCEYAARRFATIGFNSYALVDNTYPIFAKLKHTSD 156 Query: 181 DLLLAISYTGVRRELNLAADEMLRV-GGKVLAITGFTPNALQQRASHCLYTIAEEQATN- 238 ++++ +S TG E+ + +AIT + L + + + L + + N Sbjct: 157 NMIVVLSITGTTTEIIEVVNGFRNNPDFTTVAITSDANSTLGRMSDYVLDYSVDVKRINK 216 Query: 239 SASISACHAQGMLTDLLFIAL 259 ++ L + L + Sbjct: 217 YEDLTTQIPCLFLVEALSETV 237 >UniRef50_A5G0Y8 Transcriptional regulator, RpiR family n=7 Tax=Proteobacteria RepID=A5G0Y8_ACICJ Length = 314 Score = 127 bits (319), Expect = 5e-28, Method: Composition-based stats. Identities = 49/284 (17%), Positives = 98/284 (34%), Gaps = 11/284 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + I +Y L+ +K+A ++ P+ S +A SS+V+FAQ+ GY G Sbjct: 19 IVNLITAQYPNLSSGFQKIARFVTQNPNVVALESISVIALRCDTHASSLVRFAQEFGYSG 78 Query: 63 FPALKLALS-----EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN 117 F L+ A + ++ L+ + AA+ L Sbjct: 79 FKELQAVFQTRLATAAPGFRERVKALDGELSRHARSGNLGYLRDLVVRDIAALQDLLERV 138 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQA 176 E+ L ++ A I + G S +A + L + + + Sbjct: 139 PEDTLTGAARLITGADTIYIAGQLRSEPIALLLRYLLTMLHRRVVLLDPAGGLAQEMAET 198 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 + D+L+AI++ +E+ ++ G V+AIT + + + A +E + Sbjct: 199 MTRGDVLVAIAFRHYAQEVVAISERAAASGTPVIAITDSQLSPIAKDAKALFTVPEDEYS 258 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A L L +A + + + + +K Sbjct: 259 FA----RTLAAPMCLVQCLAVASAAIL-QRGRDEMPRIPTVTEK 297 >UniRef50_UPI0001AF5353 RpiR family transcriptional regulator n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF5353 Length = 311 Score = 127 bits (319), Expect = 5e-28, Method: Composition-based stats. Identities = 52/281 (18%), Positives = 110/281 (39%), Gaps = 8/281 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + IR RY+ ++ ++KL+D +L P ++ +LAN AGVS+++ +F + LGY Sbjct: 15 SLESSIRGRYEQMSALEQKLSDVILASPGQLAMQTATELANHAGVSKATTTRFFRSLGYD 74 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + + + +A + ++ R + + + + + A + T + + Sbjct: 75 SYESARREARKASTGGSPLYLQHLGDEDR---DPQALIQHHLDQEVANLVKTYGSLDQTE 131 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSPD 180 L E + ARR++L G S +A F L+++ + + L + Sbjct: 132 LFEIAQAIAKARRVVLIGYRHSQTIAVMFRSNLIQVRGDILLLPAPGDSLAEYIAGLDER 191 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+ + I +L A M R+G ++L I+ + A + S Sbjct: 192 DVAICIGLRRRVPQLESATSAMSRLGVQLLYISDVLAGTPAKLARWVIRCHT----AGSL 247 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + +T+LL + ++ P + K Sbjct: 248 MFDSNASVSSITNLLCSLVGKELPAKNPPTWHRLRSCTKNW 288 >UniRef50_B0MFI6 Putative uncharacterized protein n=2 Tax=Anaerostipes caccae DSM 14662 RepID=B0MFI6_9FIRM Length = 245 Score = 127 bits (319), Expect = 5e-28, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 101/258 (39%), Gaps = 17/258 (6%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + +++ L ++K + Y+ + S ++A E+ S ++V + +K G+ G Sbjct: 2 IIRLEEDQWKTLTDAEKSVITYINNNEELIPEKSISEMAEESYTSPATVSRTIRKSGFDG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 L+ +S E+ + + +++ T+ + Sbjct: 62 ISELRYRISARNEFNQEAM----------------IVNAIFQKSMLECQKTIENLKVPTI 105 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 E V ++ A++I L GA+ LVA+ F +L +G+N +RD + + DDL Sbjct: 106 LEVVKRIKRAKKIYLLARGATVLVAEEFEMQLQLLGYNVWIMRDSEHMKRSNLIFKEDDL 165 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE-EQATNSAS 241 ++ + EL +AA V++ T + L Q + + + + A Sbjct: 166 VIIFTVKNSTPELGMAAKFAKENKAYVVSCTCLPRSELNQYSDVYVVGYTKYDYAIKEFL 225 Query: 242 ISACHAQGMLTDLLFIAL 259 +++ +++ + L Sbjct: 226 VTSRLPLQIISRTIIEYL 243 >UniRef50_A6LTH7 Transcriptional regulator, RpiR family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LTH7_CLOB8 Length = 252 Score = 127 bits (319), Expect = 5e-28, Method: Composition-based stats. Identities = 44/260 (16%), Positives = 106/260 (40%), Gaps = 13/260 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + ++ + + ++ + L+ P + + LA + VS S++ +F +KLGY Sbjct: 1 MDPISLMKSMASTFTKVELEIYNRLMSDPTLIMNSTIVVLAEDLNVSNSAITRFCKKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KG+ + S + +D + + + + + + SE+ Sbjct: 61 KGYVEFRYDFS-------------CYFNKEEEDNEDHIVNRTVTTYLSVLNILEKMISED 107 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ + V+ ++ + I + GIG SGL+A+ +++ K N A+ + + + + Sbjct: 108 EIRKLVSKMKKSNNIRVIGIGESGLIAKYLRYRIFKYKRNIEALDNKFEIDESCSLAEEG 167 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L+AI+ +G +E+N E G + IT L+ ++ + Q Sbjct: 168 DMLIAITNSGKSKEINRQIVEAYNNGITTVVITTNDIAVLRSKSHFYFQMPSAGQFYKPG 227 Query: 241 SISACHAQGMLTDLLFIALI 260 + + +++ Sbjct: 228 AYDNQPIIIIFLEMIVNLFA 247 >UniRef50_A5TS02 RpiR family transcriptional regulator n=3 Tax=Fusobacterium RepID=A5TS02_FUSNP Length = 283 Score = 127 bits (318), Expect = 6e-28, Method: Composition-based stats. Identities = 43/282 (15%), Positives = 112/282 (39%), Gaps = 10/282 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L +++ + +K++A++ L + ++ +A VS +SV++F + LG++ Sbjct: 10 KILEKLKNTKP--TKKEKRIAEFFLDEEQRVFLMNVADIAKAIDVSDTSVIRFIKSLGFR 67 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F K + E + S+ + + I N + + + I + + N S+++ Sbjct: 68 NFTDFKNSGQENIKSRLDKTNDFIKNLDIIKEN--SIEQLYINKINEEVNKIFNSISQKQ 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSPD 180 + + +++ A+ + G ++ ++ F +L + N + D ++ ++ + Sbjct: 126 IKKISSLIIKAKHKYVVGFKSTAGISNFFGVRLGFMLENVSTFNIDDSVVINSIFNIKKE 185 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D+L+ Y + + A K++ T L + + + + Sbjct: 186 DVLIIFDYPMYSKVAKVLAKMTKENKAKIILFTDSDNAPLAEYSDILYKV----KLNGIS 241 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA-LVKKL 281 ++ + +L + L + Q E A R L++KL Sbjct: 242 VFNSLISTQILVEYLLTYISQFIEEKAKIRFTKIRKYLIEKL 283 >UniRef50_D2TS37 Putative DNA binding protein n=1 Tax=Citrobacter rodentium ICC168 RepID=D2TS37_CITRO Length = 282 Score = 127 bits (318), Expect = 6e-28, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 105/278 (37%), Gaps = 16/278 (5%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L+ IR GL+ +K+ ++ PD + +LA+ S+ S+ +F + G+K Sbjct: 7 NLLINIRNEVAGLSPILEKVGRFVTENPDFVMRHTITELADSIETSEGSITRFCRAFGFK 66 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF + AL+ + + I + ++ + + + ++ Sbjct: 67 GFSDFRTALALEQGAARPEAQG----------------NEEIADVVTSIRDSYAIINSQE 110 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L L + + +G + VA L+K+G +A+ V + ++V Sbjct: 111 LQAAAAWLNQVNNVAIYAVGTAVPVALFLQMNLIKMGKSASFVDRFYLTTSSVMLEPQSQ 170 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++ + ++ A + G ++L++T T L + + L + Sbjct: 171 GVIVVHTEQTSADMMQALALAKQHGARILSLTRGTFAPLSRLSDWNLQAAVALKGEGEFG 230 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + M+ D L AL +QD A R H +++ Sbjct: 231 FAEIAGAMMVADRLLNALEEQDERYAECRKAHQKSIFS 268 >UniRef50_C5F7B7 Phosphosugar-binding transcriptional regulator n=1 Tax=Lactobacillus paracasei subsp. paracasei 8700:2 RepID=C5F7B7_LACPA Length = 252 Score = 127 bits (318), Expect = 6e-28, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 104/260 (40%), Gaps = 14/260 (5%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + ++ + L+ S+ K+ D++ D + +S +A + S ++V + QK G G Sbjct: 2 IIQLNQEIFNSLSASEHKVIDFINNNADAVQTMSITNIARKTFTSVATVSRAIQKAGLNG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 L+ +S + ES S ++ ++ T++ S + Sbjct: 62 IAELRYQISHQIKHANESESPYK-------------VNTILLKSFREAKKTIDSISISGI 108 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + V + A RI++ G + L+A+ F L +G+NA ++D+ + T + S D+ Sbjct: 109 LQTVDYINKADRILIYARGFTALIAEEFQQDLQLLGYNAIIMKDVMWIKQTRRFISKRDV 168 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE-EQATNSAS 241 + + E+ +A+ + +G K++ P L + + +E T+ Sbjct: 169 AVIFTVRNSTPEILESAETIHAIGAKLVTCCCIAPTKLADYSDVLISGHSELIMRTHGLE 228 Query: 242 ISACHAQGMLTDLLFIALIQ 261 + + ++ L + Sbjct: 229 VYSKVPLFIIARTLIEYIAN 248 >UniRef50_C5EFT9 HTH-type transcriptional regulator glvR n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EFT9_9FIRM Length = 256 Score = 127 bits (318), Expect = 6e-28, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 105/263 (39%), Gaps = 19/263 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN I Q Y+ L +D + +Y++ +++ +L++E +S +S+V+ +KLG+ Sbjct: 1 MNLEALINQYYKNLNSNDMIVLNYVMQHKKECTNMNISRLSSECSISTASIVRTMKKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ K L + LI+ + AT+ + + Sbjct: 61 SGYSEFKFLLKGQNPGNMPTEGS-----------------NLIELLEKDIQATMKLMKQV 103 Query: 121 KLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 L+ +T+L +A+RI G G Q+FA ++ + + L + Sbjct: 104 DLNPILTLLYNAKRIYGFGTGFRQQNALQDFAHNMVSCDKSIFLIPAKQELDTQISFMKQ 163 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D++L SY+G ++ + + + +++IT F N L + LY + N Sbjct: 164 GDIILIASYSGDIKDYVESIHTLKLLDIPIISITNFNKNDLSTFTPYNLYYQSTSLTPNL 223 Query: 240 ASISACHAQGMLT-DLLFIALIQ 261 + + D+L+ ++ Sbjct: 224 KPKRISYPTLNIVQDILYREYVR 246 >UniRef50_C1YLY0 Transcriptional regulator n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YLY0_NOCDA Length = 277 Score = 126 bits (317), Expect = 8e-28, Method: Composition-based stats. Identities = 51/268 (19%), Positives = 98/268 (36%), Gaps = 9/268 (3%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L ++ +++ L +P A + S+ +LA AGV+ ++VV+ AQ LG+ G+PAL++ L Sbjct: 13 RLGRAAERVVRVLRDEPRFASYASTAELAERAGVNVATVVRAAQALGFTGWPALRVELRS 72 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 + + V + + + + ++ + A Sbjct: 73 RYLASLSAGEVLAE----HAGSDADPVREAFRADREGLRDLERTLDPARVRALAGAVHGA 128 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSPDDLLLAISYTGV 191 RR + G G A +G++ + L++ + P DLLLA + Sbjct: 129 RRTRVVGSGTFAAPGVQLAHAAGIMGYDVERLELGGTGLVSALARMGPGDLLLACDLWRL 188 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGML 251 L AA V IT + L + A+H L +E + + Sbjct: 189 PVALRSAARVARERSVPVAVITDRRDSPLAEGAAHVLLVPSE----GVGMFPSLTPVMAV 244 Query: 252 TDLLFIALIQQDLELAPERIRHSEALVK 279 + L + + +R +E L + Sbjct: 245 VHAVLAELARLGGDEVLAAVRDTERLWE 272 >UniRef50_A9WNR4 Transcriptional regulator, RpiR family n=1 Tax=Renibacterium salmoninarum ATCC 33209 RepID=A9WNR4_RENSM Length = 294 Score = 126 bits (317), Expect = 8e-28, Method: Composition-based stats. Identities = 63/260 (24%), Positives = 105/260 (40%), Gaps = 9/260 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L IR L + + +A LL + D LSSQQLA +G S+++VV+ Q LG+ G Sbjct: 20 VLATIRSLLPSLLPAAQAVAAVLLERADQVVELSSQQLAELSGASRATVVRTCQSLGFTG 79 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + L++ ++ S + P+ + + + A+ A + + + Sbjct: 80 YQQLRVLVARDAGYSTTSRAQPV--------GSAAIVAESFAQVREAVGAMTALLASADV 131 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 VT L +ARR+I+ G G S +A + A +L G A D + SP D+ Sbjct: 132 ERAVTELCAARRVIVAGNGLSAALAMDTAARLTATGRAAEFQADAIGQQIAARLLSPGDV 191 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 LL +S +G G V+ IT F + L A L + + Sbjct: 192 LLMLSGSGANSTSAKVVQAAQTAGAMVIVITAFARSPLAALAQINLIVGMPDLSFRDEVT 251 Query: 243 -SACHAQGMLTDLLFIALIQ 261 + Q +L + L A+ Sbjct: 252 VTTRIPQTILIEGLIAAIAS 271 >UniRef50_B0NEG5 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NEG5_EUBSP Length = 287 Score = 126 bits (317), Expect = 8e-28, Method: Composition-based stats. Identities = 51/280 (18%), Positives = 114/280 (40%), Gaps = 9/280 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + RI Y+ L ++ K++A YL + + A +S++ L+ + VS+++V + A LGY Sbjct: 15 SLCERIDLVYEKLTEAQKQIAIYLKKKWEQACLMSAKSLSEQVDVSEATVHRLAASLGYD 74 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F +K + E L + R ++ ++ + T +N ++K Sbjct: 75 SFTDMKEKMKEELLMN----RAVTNMSFRNRGISENWLDECLQTEMVNLVNTYQLNLKDK 130 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + MLR++RRI + G + + L + N + + + + +D Sbjct: 131 ISQGAEMLRNSRRIYVIGDKQGLGTSSYLGFVLNYLLGNTVHLT-LADVYEQIGFMGSED 189 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L+ I + A + ++LA T + Q+A LY ++ Sbjct: 190 VLIVIGFQRYCPRTQKAVELAADRNVRILAFTDCNLSPFAQKAEISLYA----TMDSTYF 245 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + A + L ++ +D E + + +E + ++ Sbjct: 246 LDSYTAVVSIAQALIARIVMKDEERIRKNVEATEYVYRRF 285 >UniRef50_C7LIK3 Transcriptional regulator, RpiR family n=39 Tax=Rhizobiales RepID=C7LIK3_BRUMC Length = 314 Score = 126 bits (317), Expect = 8e-28, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 107/278 (38%), Gaps = 10/278 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + I +R + ++ A L+ + + + +AGVS ++++F +LG++ Sbjct: 44 SVAELINERIDAMPAGERSAAQMLIANYPMLGLKTVAEFSTQAGVSSPTILRFVNRLGFQ 103 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 +P + L + LA+Q +SP + D E ++ T E++ Sbjct: 104 SYPDFQARLQDELAAQLQSPHHRNEQPDKRPDAADPGVEHTLENI----RETFRHLGEKQ 159 Query: 122 LHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL-ATVQASSP 179 LH+ V L A+ + L G + +AQ + + + ++ + Sbjct: 160 LHQVVASLSLAKGNVYLIGGRFTDPIAQYMTAHMSIVRARVFHLGGQESMWRDRLLDMGK 219 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+L+ + L A++ G +V+ +T + + + A H L + Sbjct: 220 RDILVVFDIRRYQESLLALAEKARSRGVEVVLVTDQWLSPIARVARHVL----AGRIAVP 275 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + + A +L + + + + + + RI EAL Sbjct: 276 SVWDSSAALFVLAETIIREMTRMLEKDSAARIAELEAL 313 >UniRef50_Q4A725 Transcriptional regulator n=1 Tax=Mycoplasma synoviae 53 RepID=Q4A725_MYCS5 Length = 282 Score = 126 bits (316), Expect = 9e-28, Method: Composition-based stats. Identities = 49/275 (17%), Positives = 109/275 (39%), Gaps = 9/275 (3%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 I L S+ K+ +++ + S + LA A VS ++V +F +K G+K F Sbjct: 13 ILLNNSKLINSENKVLEFINGFQGEVFNYSIEDLAKLANVSTATVFRFVRKYGFKNFKEA 72 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 + +++ L E + ++ N + ++ + + Sbjct: 73 IIFINKNLQKLNEKYPLSTSQDNN--------ISTIVAGNKYVLDNLYTNELQKIIEKAA 124 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 ++ +++RI++ G G+S +A+ L K+ N A D H L + ++ +D+ + Sbjct: 125 QIIYNSKRILIHGAGSSKRMAETLVSNLYKVSLNVIAHDDFHLFLPVLGNATTEDVCVLF 184 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S E + +++ IT + L + + + +S+ Sbjct: 185 SDNLNSPEAAFTIKQCREKKVQIILITSKKKSNLITKNDVVILYEKITSKHLNIPLSSKW 244 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 +Q ++ DLLF L+ D E++ +S ++ K Sbjct: 245 SQLLIADLLFENLLILD-SNLREKLNNSIQIINKW 278 >UniRef50_Q1IJ92 Transcriptional regulator, RpiR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJ92_ACIBL Length = 291 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 42/268 (15%), Positives = 104/268 (38%), Gaps = 6/268 (2%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 +R + L++ +L + +P LS + +A + G ++V++ + LG++ + K Sbjct: 19 ERMERLSKKRSELIRPVQERPRDYVLLSIRDVAAKLGTDPATVLRTVRGLGFESYREFKA 78 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L + L+ + + + + L G + + ++ + A N ++ Sbjct: 79 YLHQ-LSIASATSLDGMQAVSKPNSSLLSQGARALDQDLQNLQALRNTLDMNRIVAIARR 137 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + +AR+I++ G + +A+ + L +GF A + V++ DL+ AIS+ Sbjct: 138 VYAARKILVLGGDLAASLAEYLEYNLTLLGFTVVAGITPGKTINAVRSFDRHDLVFAISF 197 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 R+ + G + IT + + + + CL E ++ A Sbjct: 198 RRGLRQTVEGMKQARANGAYCVGITDSFVSPICRFSDECLLASIESHLG-----TSYAAP 252 Query: 249 GMLTDLLFIALIQQDLELAPERIRHSEA 276 L +++ + ++ + Sbjct: 253 MSLFNVMLTICAHYREARTMKTLKKLDQ 280 >UniRef50_C1YMF9 Transcriptional regulator n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YMF9_NOCDA Length = 296 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 61/274 (22%), Positives = 116/274 (42%), Gaps = 10/274 (3%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 R L+ ++ + D+LL +P A S+ +LA+ G S ++VV+ A+ LGY G LK Sbjct: 3 ARLDSLSPRERAVTDFLLDRPSEAVTASAAELASRTGTSDATVVRTARSLGYGGLRELKR 62 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 A+ + L ++ + V R V ++++ ++ + V V + Sbjct: 63 AVMDMLTTRRDPALVLDQRLERLSGT--RVFDQVLADSVDLLRGLPEVLDAGAFDTAVRL 120 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSPDDLLLAIS 187 + +A R + GIG + A+ FA +L ++G + L + DD ++ + Sbjct: 121 VEAAGRTVAYGIGPASATARYFAVELGRMGRRCTVLEATGFRLADDLLGIGGDDAVVVFA 180 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHA 247 + RE++ D VG V+ +T A+++R L T + S + S A Sbjct: 181 PLRLFREIDALLDHAAEVGAPVVVVTEAVGEAVRERVEAVLTTP----PSTSGAASENLA 236 Query: 248 QGMLTDLLFIALIQQDLE---LAPERIRHSEALV 278 ++ L + L +D A +R+ V Sbjct: 237 SWLVAHALTMELAARDRTGSVAAHQRLNRLRRAV 270 >UniRef50_Q1YL64 Possible transcriptional regulator n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YL64_MOBAS Length = 278 Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats. Identities = 50/265 (18%), Positives = 89/265 (33%), Gaps = 6/265 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L + + L + K+ A L D + +A A V S+ ++F Q LG G Sbjct: 18 LLASLDRIDGTLPKRLKQCAICLRANLDRVAVSTVADMAQLAEVPPSAFMRFCQTLGLSG 77 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGD-DPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + ++ A + + + + ++ ++ Sbjct: 78 YSEMQALFRAEYAQMRPDYTERLTRLRAEGVSGAGRLAADFAEAGIRSLMDMSKELDAQQ 137 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L L AR I L G+ + V A+ L K+G + + + PDD Sbjct: 138 LQAVAERLAGARTIHLVGLRRAFAVVVYLAYLLDKMGVASMLHHTTGQIESDHA-IGPDD 196 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L A+++ +E A + G VLA++ T L + A + L E Sbjct: 197 ALFAVTFAPFSQETLTLAARVSERGIPVLAMSDTTSCPLAEVAENLLIAREVE----VGG 252 Query: 242 ISACHAQGMLTDLLFIALIQQDLEL 266 A +A L L +A+ E Sbjct: 253 FRAPNAGLALVTALAVAVGGLRKEK 277 >UniRef50_C2ECD8 Transcriptional regulator n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2ECD8_9LACO Length = 252 Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 100/262 (38%), Gaps = 21/262 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ ++ + L+++DK++ YL A + S +L S+S+V++ A+KLG+ Sbjct: 1 MSFEDNVKMHFDELSENDKEIVRYLQQNMADAINSSIIELGEATLSSKSTVLRLAKKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GF LK L + + + L ++ + T + + Sbjct: 61 RGFSDLKFQLEQDYKADKI------------------IPTDLEQQLHHDIGKTFEYSHQV 102 Query: 121 KLHECVTMLRSARRIILTGIGAS-GLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + + A + + G S A+ F+ L+ G + + + Sbjct: 103 NFQPLIEAIHDASNVYIYPTGFSQQNFAREFSNDLLIAGKKNYLLDGTTNFDRVTRKLNQ 162 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN- 238 +D ++ +S +G + A + +IT F+ N L + A++ L+ A T Sbjct: 163 NDFVIVVSLSGNTPLIKNAIKMLNFRKVPFFSITEFSRNYLSEHANYQLFYEASVIPTAE 222 Query: 239 -SASISACHAQGMLTDLLFIAL 259 +S+ + ++ +L Sbjct: 223 PGDKMSSMTSLPIILGILSRKY 244 >UniRef50_C7QJ71 Transcriptional regulator, RpiR family n=5 Tax=Actinomycetales RepID=C7QJ71_CATAD Length = 323 Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats. Identities = 61/271 (22%), Positives = 97/271 (35%), Gaps = 15/271 (5%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L+ + +++A YLL LSS +LA GVSQ SV +FA LG+ G+P L+ AL Sbjct: 56 RLSPAQRRIAHYLLENLPEVAFLSSMELAERVGVSQPSVTRFAAALGFSGYPELRAALR- 114 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNV-NSEEKLHECVTMLRS 131 P IH + + L + + A + A +L + L + Sbjct: 115 --PIALRVPEAGIHGERIAGNELHSAL----ESDQANLEALHKYAADPARLSRLGSDLAA 168 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATV---QASSPDDLLLAISY 188 + + + G+ S VA FA+ +I + V +L ++ L+ Sbjct: 169 SEPLSVIGLRMSAPVASYFAYGAARIHPDVRVVHTPGSLAHEALLQAVAAGGTWLVVFVL 228 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 E + +G K IT A L ++ + A Sbjct: 229 PRYPAESVVVLRSARELGLKTAVITDVPLVPFAHLADVLLPVGVGSRSV----FDSHAAP 284 Query: 249 GMLTDLLFIALIQQDLELAPERIRHSEALVK 279 LL AL E ER+ EAL + Sbjct: 285 MAFAALLLQALADAAPERTQERLEAYEALAE 315 >UniRef50_C9A974 Transcription regulator n=4 Tax=Enterococcus RepID=C9A974_ENTCA Length = 252 Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 104/262 (39%), Gaps = 20/262 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M ++ L+ ++++ +++ + ++ + +A++A VS +SV +F QK+G+ Sbjct: 1 MALFEQL--NLNKLSAVEQEIYRFIVNHLEKIPYMRVRDIADDAHVSSTSVFRFIQKVGF 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + FP + + L L + ++E Sbjct: 59 QSFPEFRFYIKNHLEKAHFDAHPEHLG--------------LEARIKGLNMQIFHPDAEY 104 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ + +R A I+ G+GASG +AQ A KL +G+ + ++ ++ + + Sbjct: 105 QIRKLAEAMRDADLILFMGMGASGAIAQYVARKLASLGYFSISIDELTYPIKSFLRKDQK 164 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKV--LAITGFTPNALQQRASHCLYTIA-EEQAT 237 ++L+ +S +G +EL + V IT + L + + + EE+ Sbjct: 165 NVLVFLSVSGETKELIEVITGL-DNQAIVQKYCITPNRESTLARLCDYSIEYAIKEERKD 223 Query: 238 NSASISACHAQGMLTDLLFIAL 259 +++ + + L L Sbjct: 224 IFLDLTSQLPSVAILETLIGYL 245 >UniRef50_Q14LR0 Hypothetical transcriptional regulator with helix-turn-helix domain transcription regulator protein n=1 Tax=Spiroplasma citri RepID=Q14LR0_SPICI Length = 283 Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 117/279 (41%), Gaps = 9/279 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L + L ++ + + P + +LA VS+S++ + A+ LG+K Sbjct: 1 MLSLLTYDKNTLTDTEISVIKQIFQNPLLFTSKTITELAKTYYVSESTITRMAKHLGFKN 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 L++ + E L + + + L+ + + + +++ T++ E L Sbjct: 61 IKELQMHIYERLNF------LNKNYETNETMNLKDIANNMRVYYSYSIHETIDNIDLEVL 114 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + +RI GIGAS L + L IG+N ++H+L+ T+ + DDL Sbjct: 115 DRLINDIVLKKRIFAFGIGASFLACRVLHSNLNMIGYNCYTTENIHSLMVTLSNAEADDL 174 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTP-NALQQRASHCLYTIAEEQATNSAS 241 ++ S +G E+ + ++ V +T + L + L+ + ++ + Sbjct: 175 IIIFSKSGKTNEVVNIINLANKLNIDVALVTNNPNIDELYKIKHKILFEVHTKENERFPA 234 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +S+ Q +++D++F +L++ E + + + Sbjct: 235 LSSKIVQILISDIIFRSLLKIHP--NLENKIKAANAITE 271 >UniRef50_Q1GL90 Transcriptional regulator, RpiR family n=9 Tax=Rhodobacterales RepID=Q1GL90_SILST Length = 304 Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats. Identities = 52/278 (18%), Positives = 96/278 (34%), Gaps = 8/278 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L I+ R + L K A Y++ P + A++AGVS +++ + A+ Y+G Sbjct: 13 LLSTIKSRIETLPPKLKTAAKYVIDSPGDFGLDPIRVSADKAGVSPNTLTRLAEVFDYEG 72 Query: 63 FPALKLALSEA-LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F + A + + +Q+ D + + + +L + + E+ Sbjct: 73 FEDFRAPFRAALVTDREADLGSEWLDQLAAGDQTSALQARAARNALNITARSLRLMTPER 132 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA--LLATVQASSP 179 V + SAR +T ++ +A F + ++ + H + P Sbjct: 133 TTAIVDAMTSARHCFVTASRSTHALAYYFHYV-GRMALPTLELVPRHMGDAADDLLDIGP 191 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D L A+++ A G V+ ++ A RA H L A+ Sbjct: 192 QDCLFAMTFAPYSTSTIRAIRMAREAGATVILLSDSDTIAPGVRADHQLTFSAQSPHH-- 249 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 +L + L LI A RI E L Sbjct: 250 --FGCLSGAMVLLESLLSHLIHAGGADAQARISRYETL 285 >UniRef50_C2GZH1 RpiR family transcriptional regulator n=17 Tax=Enterococcus faecalis RepID=C2GZH1_ENTFA Length = 256 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 36/256 (14%), Positives = 100/256 (39%), Gaps = 17/256 (6%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 L ++ ++ Y+ + +++ ++LA+E S++++ +F QK +G+ K L Sbjct: 14 PQLNPTELEIYKYISHNIEKVPYMTIRELADEIHFSKTAIWRFCQKFECEGYTDFKFKLK 73 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 L+ + ++ L + + E ++ + +L Sbjct: 74 NYLSERKKTAQPK---------SLDETM------LIHFLQRSSEELLEGRIVQAAELLAK 118 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKI-GFNAAAVRDMHALLATVQASSPDDL-LLAISYT 189 ++ G G S ++A+ I +A+ ++ + + + ++A+S + Sbjct: 119 KEFVLFIGEGTSKVLAEFGEIYFSSIYNLSASVSHLFSHPVSKLSEETAKKVGVIALSVS 178 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQG 249 G +++ D + +G V+AIT + + Q ++ + + ++ A +++ Sbjct: 179 GETQKVRQNIDYFIEMGIDVIAITNSEKSTIAQLSTVTIPYYITTEKSSIADVTSQLPAL 238 Query: 250 MLTDLLFIALIQQDLE 265 L + L + E Sbjct: 239 FLIEKLAKTVSTMLNE 254 >UniRef50_C1D3U9 Putative transcriptional regulator, RpiR family n=1 Tax=Deinococcus deserti VCD115 RepID=C1D3U9_DEIDV Length = 313 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 51/278 (18%), Positives = 102/278 (36%), Gaps = 8/278 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 ++ + + ++LA Y+L L++ LA AG SQS+V +FA +LG+ Sbjct: 14 FRQFLQSELPEFSGAQRRLALYILQHAAELPMLTTTALAQAAGTSQSTVTRFASRLGFSS 73 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + A AL + + + + LI + + + ++ + Sbjct: 74 YAAFTDALGRMVLDELHMNIPLERFRHSEGNGG---LASLINQEILHLRSLQSLVETKAF 130 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSPDD 181 H V +L +R +++ G AS +A + L ++ + +A L S D Sbjct: 131 HRSVELLTQSRSVLVAGCAASTSLAVHTHLYLSRLRPQVQCATEFNASLFTQAVHYSAGD 190 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L S + +L + + +V+ +T + + + L T + Sbjct: 191 CALLFSVPRMTGDLARMLGLLQQRDVQVILVTDPSGLIFTEGVTETLVVPVSNTPTTAVP 250 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 + ML LL A + E + ++ E L K Sbjct: 251 ----ASMMMLASLLIDATALRLPEDSLRNLQRFEGLAK 284 >UniRef50_Q88GX5 Transcriptional regulator, RpiR family n=7 Tax=Proteobacteria RepID=Q88GX5_PSEPK Length = 307 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 50/285 (17%), Positives = 90/285 (31%), Gaps = 9/285 (3%) Query: 1 MN--GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 M+ R+ +G A S +K+A Y+L +S +A + GVS+SSV ++ + L Sbjct: 18 MSQLIKQRLENSLEGAAASGRKIATYMLANLHELPFQTSASIAAKLGVSESSVGRYCRSL 77 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 GY ALK L L P + + + D ++ AA+ Sbjct: 78 GYAHLKALKQDLQNDLGDGPWLVGDRLQDYRQNQDASDN--AGSLELEIAALVRVHEYRQ 135 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQAS 177 H L S R+ + G +A + L + V + Sbjct: 136 SPAWHNVAQRLASKPRVFIAGFQTERGIAMCMSHLLQYLRDGVQLVDISAGHFGEVLLGR 195 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 + D L+ R + + G V +T + A E Sbjct: 196 AEDSALVVFEARRYSRHALMLCQKAREAGIAVTLVTDTFCDWADANADEVFRIPTEFNLF 255 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 + L+ + ++ +R+ + AL + V Sbjct: 256 WE----STSTMLSWVHLMVNEVCKKLGPDVEKRLEATAALHNEFV 296 >UniRef50_Q97LM6 Transcriptional regulator, RpiR family n=6 Tax=Clostridiales RepID=Q97LM6_CLOAB Length = 257 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 99/271 (36%), Gaps = 20/271 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + Y L ++D + Y+ +S +LA + +S++++ +F QKL Sbjct: 1 MRLEELVNNNYNKLNENDLHIWKYICCNKRECCTISIDELAKKCNISRTTISRFTQKLSL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GF K+ L L S + ++ Y T+ E+ Sbjct: 61 EGFGEFKVRLKLELGVSNNFKSSSV------------------EDVYQDYYKTIKDMKEK 102 Query: 121 KLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E M+ A+ + + G GA A + + V + ++ ++ Sbjct: 103 DFLEICRMIYGAKHLFVYGTGAVQIAAANELKRHFISVNKFFVTVHGEAEMNMVLETATD 162 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +DL++ IS +G ++ ++ ++IT + N++ + LY I Sbjct: 163 EDLIVIISLSGEKKSAVEYLKKVKVKNIPSISITKLSDNSIARLCDENLYIITRNIKIEG 222 Query: 240 ASISACHAQ-GMLTDLLFIALIQQDLELAPE 269 Q +L ++LF+ I +L E Sbjct: 223 VVTCENVGQYFILIEILFLKYITYLGQLKKE 253 >UniRef50_C9XQF1 Phosphosugar-binding transcriptional regulator n=5 Tax=Clostridiales RepID=C9XQF1_CLODC Length = 250 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 43/266 (16%), Positives = 103/266 (38%), Gaps = 18/266 (6%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + + + L +++ ++ ++ LS ++A+E S ++V + +K G G Sbjct: 2 IIELNKSNSENLTKTELEIIKFINENESILPELSIVEIAHETYSSPATVSRAIRKCGLNG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F L+ L +D ++ +G+ + K A + S L Sbjct: 62 FNELRYRL----------------TVKDENDDIQNMGDIINKSFIEA-QRVIEQISLTTL 104 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + + +I + G + VA+ F+ KL + FN + D + + ++ D+L Sbjct: 105 INIIKTINKSSKIYILARGLTEYVAKEFSLKLQLLDFNVVFINDPNIMKIKSKSIKKDEL 164 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY-TIAEEQATNSAS 241 ++ S G EL +A VG KV+ L + + + E + + Sbjct: 165 IIIFSLNGNTIELVESAQNANLVGAKVITCCCSESAKLIKYSDLYIVGYKHEHISISEYE 224 Query: 242 ISACHAQGMLTDLLFIALIQQDLELA 267 +S+ +++ ++ +++ + Sbjct: 225 VSSRLPLYIISRIIIDYMVRYNNSEN 250 >UniRef50_Q6A765 Transcriptional regulator, RpiR family n=3 Tax=Propionibacterium acnes RepID=Q6A765_PROAC Length = 296 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 97/281 (34%), Gaps = 7/281 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + R+ + Q + +D +A Y + +++ G S +SV +F +KLGY Sbjct: 16 SLYTRLGE-LQAMTPTDAIIAQYCEDSFPHVALENLDEISAATGTSTASVTRFVRKLGYA 74 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F +L E +A D + ++ ++ LN E Sbjct: 75 SFRDFSRSLREEVA-ANFDLPSDRTTNDPMTDEPGAMWRSKMEAARRSIDIGLNSLDGET 133 Query: 122 LHECVTMLR-SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 V +LR +R + L + F + + + + + + Sbjct: 134 FDRVVELLRDDSRPLCLVAAATGHALLDYFRLLVRYYRRDVILLDSTDRMAHQLIDLPDN 193 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +LLA + R + + + +T + +++ A H L +E +S Sbjct: 194 AILLASVFDRHSRMVESVLRLFHQRNMTTVLLTNRSSTPMRRYADHVLLVSSE----SST 249 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + +L + L AL D E+ R+ + L +L Sbjct: 250 AFRSRACYLILLESLVAALAPADHEVERFRVETMQGLFDEL 290 >UniRef50_C3RH58 Predicted protein n=2 Tax=Bacteria RepID=C3RH58_9MOLU Length = 255 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 42/263 (15%), Positives = 90/263 (34%), Gaps = 17/263 (6%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + ++ L + + + + LL D L+ LA VS +++ + +KL Y Sbjct: 3 MSLIKNFQKYGNNLTELEIECFNKLLTFRDLEPSLTISSLAETLNVSTTTIFRMVKKLDY 62 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 K F + L + + EK I T+ + Sbjct: 63 KTFMDFRYDL--------LYHRRDEYEYQSPVESTCDSLEKEI-------KDTIEMLRNL 107 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + + + A+ +++ G + VA+ A KL G D L + D Sbjct: 108 DIDDVIKDIVKAKSVLICSSGMNKYVAKILAVKLSLYGIRTIYPDDHWFLYLEANNLTQD 167 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D ++ +S G + G K+L +T + + + +++ + + Sbjct: 168 DFVIVLSRGGATEAIIDVMKNAKLSGCKILLVTETRNSPMTKLSNYVMNVSVTKDE--GY 225 Query: 241 SISACHAQGMLTDLLFIALIQQD 263 I + + + L L+ Q Sbjct: 226 DIDSRLHIHLAIEYLLRELMNQY 248 >UniRef50_O67500 Uncharacterized phosphosugar isomerase aq_1546 n=4 Tax=Bacteria RepID=Y1546_AQUAE Length = 322 Score = 125 bits (313), Expect = 2e-27, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 68/185 (36%), Gaps = 2/185 (1%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWK 153 L ++I+E + L+ E + ++ILTGIG SG +A+ + Sbjct: 5 DLLEFAREVIREEIKGLERLLSSLDENFSKAVEILRNCEGKVILTGIGKSGHIARKISST 64 Query: 154 LMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 L G + + AL + D L+AIS +G E+ + V+ IT Sbjct: 65 LSSTGTPSVFLHPAEALHGDMGLLDSKDALIAISNSGESTEVLYVLQYAKALNIPVIGIT 124 Query: 214 GFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERI 271 G ++L + + L E N A + L D + + L++ + Sbjct: 125 GNEKSSLAKYSDVVLKIPVDREACPFNLAPTVSSTVTLALGDAIAMTLMKLKGFSQEDFA 184 Query: 272 RHSEA 276 + A Sbjct: 185 KRHPA 189 >UniRef50_C6ATF5 Transcriptional regulator, RpiR family n=17 Tax=Rhizobiales RepID=C6ATF5_RHILS Length = 291 Score = 125 bits (313), Expect = 2e-27, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 99/267 (37%), Gaps = 7/267 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + I +R + + ++A + L PD ++ +A + V S++V+ A LGY Sbjct: 17 SLRSTIIERKASMPKRLAQVAAFALGNPDEIAFGTTASIAAASDVQPSTLVRLAHHLGYG 76 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRG--DDPLRLVGEKLIKENTAAMYATLNVNSE 119 GF L+ E L + S + + DD + I ++ Sbjct: 77 GFSDLQSIFRERLRDRTLSYEERLVTLEQSSGDDEDANLLSGFIAAANQSVNRLAATVQS 136 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASS 178 + + V +L +A I L S + + + K+ V VQ ++ Sbjct: 137 DTFTKAVNILANAETIYLIAKRRSYPLTAHMTYAFSKLNIRHQIVASPNGVDPEMVQFAT 196 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P D +A S++ + + E+ G V+AIT + L A+H + Sbjct: 197 PKDAAIAASFSPYAADSLSQSQELADRGVPVIAITDSAFSPLAACATHWFEVA----EAD 252 Query: 239 SASISACHAQGMLTDLLFIALIQQDLE 265 A + A LT L +A+ ++ + Sbjct: 253 FAGFRSLSASMALTMALPVAIAERRRK 279 >UniRef50_C5B7U9 Transcriptional regulator, RpiR family protein n=1 Tax=Edwardsiella ictaluri 93-146 RepID=C5B7U9_EDWI9 Length = 225 Score = 124 bits (312), Expect = 3e-27, Method: Composition-based stats. Identities = 98/204 (48%), Positives = 138/204 (67%), Gaps = 6/204 (2%) Query: 2 NGLLRIRQRYQGLAQS-----DKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQ 56 + ++ + L+ + ++KLAD++L P+ LSSQ+LAN G+SQSSVVKFA+ Sbjct: 15 DIYEQLGENKAALSFAGTKRDERKLADFILSSPEQLGKLSSQELANTLGISQSSVVKFAK 74 Query: 57 KLGYKGFPALKLALSEAL-ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLN 115 KLG++GFPALK +S L Q + +H+ I DPL++VGEKL+ E AA+ +TL Sbjct: 75 KLGFRGFPALKQDISAHLLRHQAPANEAALHHGILRHDPLKVVGEKLMAEKIAALQSTLT 134 Query: 116 VNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQ 175 +N EE+L + ML ARRI++TG+GASGLVA++FA KLM+IG A A D H +A Q Sbjct: 135 INHEEQLQRALRMLLGARRIVITGLGASGLVARDFANKLMQIGLAAYAESDTHMQIACAQ 194 Query: 176 ASSPDDLLLAISYTGVRRELNLAA 199 A P DLL+AISY+G R+E+N+AA Sbjct: 195 AMQPQDLLMAISYSGERKEVNIAA 218 >UniRef50_Q046R3 Transcriptional regulator n=7 Tax=Lactobacillus RepID=Q046R3_LACGA Length = 263 Score = 124 bits (312), Expect = 3e-27, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 95/258 (36%), Gaps = 10/258 (3%) Query: 8 RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALK 67 + L+ ++ L + + P +S +L+ A VS +++V+ QK+GY G+ + + Sbjct: 11 NMQNNDLSNAELHLWEIVQNNPQKIAKMSIVKLSQFAHVSTATIVRTMQKMGYSGYTSYR 70 Query: 68 LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 +L ++ + + +I +N M TL+ S + + ++ Sbjct: 71 ESLK---------LQDRSNSNFDVLNEADDKIKSVITKNEIEMNNTLHNLSYSNIEDSIS 121 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAIS 187 M + A+ + + G S + Q KL G D + + + D L++ IS Sbjct: 122 MTKQAKVVYIFARGLSESIGQEIMVKLQLTGKYVEFHADPNIIKTASKRIKQDALVIFIS 181 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY-TIAEEQATNSASISACH 246 G EL AA + + T L ++ +++ + + Sbjct: 182 LNGNTPELVDAAKSLSHHDVPTITFTTNPKGQLASLSTLTFMGYMSKTNYFPDYEVRSRL 241 Query: 247 AQGMLTDLLFIALIQQDL 264 ++T + A + Sbjct: 242 PLQIMTRIFSDAYSVRTG 259 >UniRef50_A5EGL2 Transcriptional regulator, RpiR family n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EGL2_BRASB Length = 303 Score = 124 bits (312), Expect = 3e-27, Method: Composition-based stats. Identities = 49/277 (17%), Positives = 101/277 (36%), Gaps = 7/277 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RIR LA ++ +A +L T + QLA A VS +V++ KLG+ G Sbjct: 11 VAERIRVVRNHLAPAELAVAKVILENYPTGGLVPIVQLATAAEVSAPTVLRLVSKLGFDG 70 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + A L + Q V + + + + +T + ++L Sbjct: 71 YGAFHETLRAEI-HQRIFSPVDAYPDSKRQPAAETPAARAQAAYVDCIRSTFSHLDVKEL 129 Query: 123 HECVTMLRS-ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASSPD 180 V+ L AR +++ G S ++A A L + + + D ++ + P Sbjct: 130 KAAVSALADVARPVVVMGGRISAILATQLATYLSMLRKDVTHIASDGTERISALVDLKPR 189 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +++ + ++ E + ++ +T + L A+ L + + Sbjct: 190 TVVVLFDFRHYQQSTLDWGLEAAKRRAHLILVTDQFLSPLASHATTLLTSSTK----GLE 245 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + +LT+LL + + A +R+ AL Sbjct: 246 PFDSMAGGFVLTELLISEVARALGSPARKRLGEFLAL 282 >UniRef50_A6X385 Transcriptional regulator, RpiR family n=2 Tax=Ochrobactrum RepID=A6X385_OCHA4 Length = 282 Score = 124 bits (312), Expect = 3e-27, Method: Composition-based stats. Identities = 54/281 (19%), Positives = 104/281 (37%), Gaps = 9/281 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 +LRI++RY L ++K+A +L + D S+ ++A AGVS+++ +F Q LGY Sbjct: 5 LVLRIQERYAKLTAGEQKIAQLVLEREDDILIHSATEIAEMAGVSKATTARFFQHLGYAD 64 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F +KL E ++ L + A + T +K+ Sbjct: 65 FNEVKLQAREERNRTEPFEYSSTVDEEVP---LVRTISAHLDLEIANITRTFEALRSDKM 121 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSPDD 181 E ++ A R+ + G+G A+ ++ + + + + + + P D Sbjct: 122 REAAELIAEAPRVWVIGLGDEEGFARYARLLFSRLRHSVMLLGINQGSWAEDLAMTGPKD 181 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTP-NALQQRASHCLYTIAEEQATNSA 240 +LL I+ R L ++ IT Q+ A L + A Sbjct: 182 VLLLITLPPHRALLKQILGYAATSRLNIVTITDRGSVFEAQRYARVVLPCHVDSIALG-- 239 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++ A LL + + A +R+ + +L Sbjct: 240 --ASYTAVSSAIRLLALTYASYAGKSAQQRLEIVAGIHDEL 278 >UniRef50_A0K0I4 Transcriptional regulator, RpiR family n=1 Tax=Arthrobacter sp. FB24 RepID=A0K0I4_ARTS2 Length = 274 Score = 124 bits (311), Expect = 4e-27, Method: Composition-based stats. Identities = 46/282 (16%), Positives = 90/282 (31%), Gaps = 15/282 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M RI + Y L ++K AD LL + ++ +LA +GVS++++ + ++LG+ Sbjct: 1 MRIDERIERHYAELGPQEQKAADTLLDRLGDLAMYNAAELARLSGVSKATMSRLFRRLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + F +K +S + + + E+ Sbjct: 61 EDFNEVKEHTRSIRSSGMPLGPQSSDGGLPAHWG----------QEQENLRRLAESLDED 110 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSP 179 KL L A ++L G S VA +F +L++ + L + Sbjct: 111 KLSAACGKLAGAGTVLLLGFRNSFPVALHFRQQLLQCRPAVSVAPQPGQSLGEELAGLGA 170 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D ++ + G + I L A+ L + Sbjct: 171 GDAVVLFGFRRRPAGFRKVLQGAAATGATTILIGDPGARRLAADAALWLECPVDGAH--- 227 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + A L +L ++ ER+R + L Sbjct: 228 -AFDSYAAAMSLVSVLANGVLVALGRPGRERVREVTGIFDTL 268 >UniRef50_A8FAT4 Transcriptional regulator n=2 Tax=Bacillus RepID=A8FAT4_BACP2 Length = 254 Score = 124 bits (311), Expect = 4e-27, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 103/272 (37%), Gaps = 21/272 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + + ++ L ++D + + + + + Q LA A S SS+ + A+K+G+ Sbjct: 1 MILDKLVNEYFEDLNKNDLHIIKTIHDHLEEMKTMKIQDLARYAHTSISSIHRLAKKIGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ LK + ++ + + + KL+ ++ + + Sbjct: 61 DGYSDLKSYVKLNHLTE---------------ESTQDLM-KLLDQDISQTRKYMEQLDFH 104 Query: 121 KLHECVTMLRSARRIILTGIGASGL-VAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 +L+ ++ A I + G G + L +A + +L + + +R L + Sbjct: 105 QLN---QLIDRAPYIYIYGTGTAQLDLANDVQRQLWSLHKKSQVLRSKRDLTDGIIEFGE 161 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE-QATN 238 DDLL IS +G + L+ + K +++T N L Q A +Y + N Sbjct: 162 DDLLFIISLSGESKNLDEIIQLVKTRHIKFISMTTLRNNLLAQNAMFNIYVSSTPFPLYN 221 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPER 270 S+ ++ D++ + R Sbjct: 222 KVDNSSFLPFYIVVDMIVRKFSEWKWNQLNNR 253 >UniRef50_C9Q7M3 Transcriptional regulator n=2 Tax=Vibrio RepID=C9Q7M3_9VIBR Length = 284 Score = 124 bits (311), Expect = 4e-27, Method: Composition-based stats. Identities = 42/285 (14%), Positives = 100/285 (35%), Gaps = 11/285 (3%) Query: 1 MNGLLRIRQ--RYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 MN + I + ++K + +Y + +L ++ GV ++++ +F +L Sbjct: 1 MNKQVFINSVNNLKSTTPAEKLIIEYFIKNYTMLPFAKMDELCHQIGVGKATLGRFLNRL 60 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 G+ GF K +SE L + +P + + P + +E + + +T + Sbjct: 61 GFDGFIGFKKTVSEELVQELTTPIDRCNK-LNIQSPYDELITNHYQEIVSNLESTYQLMQ 119 Query: 119 EEKLHECVTMLRSA-RRIILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQA 176 + L + ++ + G ++ +A F + + + D L + Sbjct: 120 SNDFSLAIEHLLNPQGKLYIMGSASAEALANYFFLLARYLRKDVIFLKADPSTLPHQLVD 179 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 P D+L A+SY + GGK++ +T N + + + Sbjct: 180 VEPADILFAVSYHRFSSITVRCVRWFKQNGGKIIVLTDQQVNPFVAYSDIQFTAESHSEG 239 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + + ++L + + + +R R E Sbjct: 240 L----FNNRTSGFSIIEVLIKGMSITNDKD--KRFRRIEDTFNNF 278 >UniRef50_UPI0001909264 RpiR family transcriptional regulator n=1 Tax=Rhizobium etli CIAT 894 RepID=UPI0001909264 Length = 309 Score = 123 bits (310), Expect = 6e-27, Method: Composition-based stats. Identities = 43/277 (15%), Positives = 101/277 (36%), Gaps = 6/277 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + +R+R G + S++ LA Y+L + + +A GVS+ +V +F + LG++ Sbjct: 21 DIEAILRERMSGFSPSEQSLAGYILDNIEILPFETGSSIAEAVGVSEMTVTRFVRGLGFE 80 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 LK L A++ + + + D + ++ ++ A+ + + E Sbjct: 81 SLRDLKKRLRVAVSEKDSEVDDYLAR-FQMRDGRQPQLQESLRLELDAIVKAYALTTTEV 139 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD- 180 E +L AR I + G AS +A +FA +L+ N + + + + P Sbjct: 140 WDEAAGLLVKARIIYVVGFQASKGLAMDFASRLLWARPNVIFIDNSSGTFGEIINADPKQ 199 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 ++ I +++ + ++ +T + + Sbjct: 200 SAVVLIDTASYATRGIKLVEKLKSMDMPLVIVTDKFSHWAFAYTRFVFEAHTHVKTFWD- 258 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + + ++ +LL A+ + A + Sbjct: 259 ---STASISVVLNLLIDAVATKLGPKAKRNFAMMSDM 292 >UniRef50_Q930C4 Transcriptional regulator, RpiR family n=1 Tax=Sinorhizobium meliloti RepID=Q930C4_RHIME Length = 280 Score = 123 bits (309), Expect = 6e-27, Method: Composition-based stats. Identities = 48/282 (17%), Positives = 108/282 (38%), Gaps = 6/282 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M R++ L ++++L ++ +P ++ +LA GV +++ + A+KLG+ Sbjct: 1 MLIAERVQTIADTLTPAERRLVKEIIAKPRDVALGTAGELARRTGVHEATASRLARKLGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + + + A+ + + + + E L+++ A+ + EE Sbjct: 61 ETYAGFRHAIRDEFIVKTDPALRVRRTLETSRG--HGMLEMLVQQEIEALTRLSSYVDEE 118 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQASSP 179 +L L RRI + G + +A +L ++ F V + + + P Sbjct: 119 RLAAAAAALSDRRRIFIFARGNAETLAVLMNRRLRRMAFETVLVCGDSRDIAEQILSMGP 178 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD LL ++ R + +VG + ++G +L +A H L A Sbjct: 179 DDALLVFAFRRQPRAYAPLIERAGKVGAVSVVVSGTVGPSLSPKADHLLAAPRAGDAD-- 236 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + + L +++ Q D + + L+ +L Sbjct: 237 -AFQTLTVPMAICNGLILSMAQSDEVRSLSNLEQLGELIGEL 277 >UniRef50_B1IEE2 Transcriptional regulator, RpiR family n=11 Tax=Clostridium RepID=B1IEE2_CLOBK Length = 253 Score = 123 bits (309), Expect = 6e-27, Method: Composition-based stats. Identities = 38/265 (14%), Positives = 93/265 (35%), Gaps = 19/265 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ I+ + GL + + ++ +Y++ + + + +A S S++++ A+KLGY Sbjct: 1 MDISKFIQNK--GLTEIEIEVLNYMIDNINDINKMGVRGVAKNNFTSTSTIMRLAKKLGY 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF ++ L ++ E + + + E+ E L + + Sbjct: 59 SGFLEMQYNLLS--LTKNELKDNLNDSGFIESLNMDSLLEENSTEAINNFIDILFNDDHK 116 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + G SG+VA+ KL+ +G ++ Sbjct: 117 FI-------------FIYANGFSGIVAEYINKKLLVMGKRCILSNGTDSIGVFENNLDFI 163 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 ++ IS +G + KV++ T N++ + + + + Sbjct: 164 SAIIVISKSGETPMVLNKVKTAKEHNIKVISFTNERENSISKLSDIRFKIKDTNKLDDRN 223 Query: 241 SI-SACHA-QGMLTDLLFIALIQQD 263 + + +L +LL ++ Sbjct: 224 LMPNTFFPKVLVLIELLVYEYYKKK 248 >UniRef50_D1PQY5 RpiR-family transcriptional regulator n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQY5_9FIRM Length = 258 Score = 123 bits (309), Expect = 7e-27, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 94/263 (35%), Gaps = 23/263 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ ++ + L +++++ Y+L D A + +A + S S++++ + K+GY Sbjct: 1 MDIKKMVQGK--KLTDAEQQVLIYILDHLDVALAQGVRDIARQNYTSTSTIMRLSHKMGY 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF + L E S + + + + L N+ + Sbjct: 59 AGFVDMCYKLRTLTQEHTEQVSEAQNFLDGFN-----------------LDSLLAYNAYD 101 Query: 121 KLHECVTMLR--SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 +L C + + + I + G SGLV + A KL +G ++ + Sbjct: 102 QLKACAQHIAGLNGKFIFVYATGFSGLVGEYLAKKLTNMGRLCLFAGGGDSVGMFENSLD 161 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT--IAEEQA 236 L L +S +G + G +AITG PN++ Q A + Sbjct: 162 SMGLFLCVSKSGETALVRDKIKTARENGVPTVAITGERPNSVSQYADLWFRVEDYCKLDD 221 Query: 237 TNSASISACHAQGMLTDLLFIAL 259 N + ML +L+ Sbjct: 222 QNVRPNTFFPQALMLAELIAYEY 244 >UniRef50_B7QTT1 Transcriptional regulator, rpir family n=2 Tax=Ruegeria RepID=B7QTT1_9RHOB Length = 276 Score = 123 bits (308), Expect = 8e-27, Method: Composition-based stats. Identities = 45/264 (17%), Positives = 88/264 (33%), Gaps = 6/264 (2%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 + R+ + L + + A + + +A AGV+ S ++F Q G+ G+ Sbjct: 18 INRLDEIIGTLPKRMDQCATFTRRNLHLVAVSTVSDMAKAAGVAPSVYMRFCQVFGFGGY 77 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDD-PLRLVGEKLIKENTAAMYATLNVNSEEKL 122 ++ E S + D + + ++ + N + + L Sbjct: 78 SDMQALFREQYTSFRPDYEERLATLRSDQDHSSGQLLADFAEAGQKSLISLGNSVANDGL 137 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + L AR + L G + V N A+ L + + L SP+D Sbjct: 138 IKVAEGLSQARIVHLIGARRAFAVVSNMAYLLENLDVPTHLHTHVGHLS-NHHLVSPEDA 196 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 +LA+++ + A G V +T L + A+ L E A Sbjct: 197 MLAVTFAPFSQTTINDARIAAERGATVFGLTDSEKCPLFEFATETLVVREHE----VAGF 252 Query: 243 SACHAQGMLTDLLFIALIQQDLEL 266 + +A LT L + ++ Sbjct: 253 RSLNASLTLTTALSVLTAEKRKAT 276 >UniRef50_C7RG92 Transcriptional regulator, RpiR family n=2 Tax=Anaerococcus RepID=C7RG92_ANAPD Length = 249 Score = 123 bits (308), Expect = 8e-27, Method: Composition-based stats. Identities = 48/264 (18%), Positives = 99/264 (37%), Gaps = 21/264 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + +R+ Y L +D ++ Y++ A L+ Q+A+E G+S SS++ F +KLG Sbjct: 1 MILMNLVRENYSKLNNNDLRIYSYIIQNKSEANELNINQMADELGLSTSSIMTFTKKLGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ LK + +D + I+ + T+ + S Sbjct: 61 DGYSELKYLIKW-----------------SEEDKNSSFDDNEIEYTKNDINLTMTMMSSL 103 Query: 121 KLHECVTMLRSARRIILTGIGASGL-VAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 L + AR I + G G + L VA+ + +G + Sbjct: 104 NLDGLFRKINEARDIFVIGNGYTQLNVAEELKRNFLNVGKILDILDQDSDYERYKGLIKE 163 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D+L IS++G +L + + +IT + N + + + + + E + Sbjct: 164 GDVLFVISFSGENEKLIDFIKSLKE-DVTIASITKLSNNTISYLSDYNISFVTHEVYDFN 222 Query: 240 ASISAC-HAQGML-TDLLFIALIQ 261 ++ +Q + D + + + Sbjct: 223 QRMTITPISQYYIVIDFIILKYLS 246 >UniRef50_D1AJC9 Transcriptional regulator, RpiR family n=4 Tax=Bacteria RepID=D1AJC9_SEBTE Length = 248 Score = 123 bits (308), Expect = 9e-27, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 102/259 (39%), Gaps = 17/259 (6%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + + L S++++ Y+ + +S +A E S ++V + +K G G Sbjct: 2 IIQLNDKIKSKLTSSEEQVIKYINENDNKLVDMSIVDIAEETFTSPATVSRAIKKCGVNG 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F L+ LS+ S ++ ++ TL S ++ Sbjct: 62 FMELRYNLSKRKEEINSSKD----------------INEIFSKSLIETRQTLENISVNQI 105 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 E + +++ +++II+ G S LVA F+ KL + FN + D + + + ++ D L Sbjct: 106 LEIIELIQKSKKIIVIARGLSELVATEFSLKLELMDFNVFNISDPNIMKKFSREANKDHL 165 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY-TIAEEQATNSAS 241 +A + G +++ V+A + + L++ + H + + Sbjct: 166 YIAFTLKGEDQDILTTIKNAHLRDANVVACSCGSNKELRKYSDHIILGYKHSNISIKKFE 225 Query: 242 ISACHAQGMLTDLLFIALI 260 +++ +++ ++ L+ Sbjct: 226 VTSRLPLFVISRVILDYLV 244 >UniRef50_A0QRN2 Transcriptional regulator n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0QRN2_MYCS2 Length = 305 Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats. Identities = 51/273 (18%), Positives = 106/273 (38%), Gaps = 14/273 (5%) Query: 10 RYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLA 69 + L+ + +++A YLL P+ A L+++ L +GVSQ+SV +FA +LG++G+P ++ Sbjct: 39 NRRRLSPAHRRVARYLLDHPEQAAALTAEDLGKRSGVSQASVTRFAMELGFRGYPEMRAE 98 Query: 70 LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTML 129 L +A+Q + + + + K+ + + ++L L Sbjct: 99 LGNQIAAQAKGVPNGLVANVLE--------RTVAKDVANIEGLVSSPWAGQRLDRVGRNL 150 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP--DDLLLAIS 187 ++ + + G+ S A FA+ K+ + V + ++ +LA Sbjct: 151 AGSQPLPVMGLRISRPFADLFAYFGAKVHPDVRVVPAGSDGDDVLAVAAKAGATWMLAFG 210 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHA 247 R L + +G +V +T L L + T +C A Sbjct: 211 LPRYPRALLDSIRYARSLGLRVALVTDSPLCPLAHDVDDLLAAPVNSELT----FDSCTA 266 Query: 248 QGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 LT L A+ + + R+ + ++ Sbjct: 267 PLALTMGLLQAMTEALPDHGQARLEEFDQRAEE 299 >UniRef50_C8SNA8 Transcriptional regulator, RpiR family n=2 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SNA8_9RHIZ Length = 311 Score = 122 bits (305), Expect = 2e-26, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 99/279 (35%), Gaps = 7/279 (2%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + + L S++K+ LL T+ ++ LA AGVS +VV+ KLGY Sbjct: 1 MAIRDVLMRGDLALTPSEEKIVRLLLTDYPTSGLGTASSLARRAGVSDPTVVRLVVKLGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GFP + L + ++ SP + + + + V + T A+ + Sbjct: 61 DGFPDFQAKLLAEVEARLHSPLLMMEAKRQSGSSDSAVLA-YLDSVTTALQKATAATPVQ 119 Query: 121 KLHECVTMLRSARRIIL-TGIGASGLVAQNFAWKLMKIGFNAAAVRDMHAL-LATVQASS 178 +L A+ I+ G S +A A L++ + + T+ Sbjct: 120 TYERAARLLMEAKGEIVLLGGRFSRHIAGMLAGYLVQFRSGVRDLGVLSPQTFDTLADLG 179 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D+L+ Y + ++ A + + ++L T + + A + + E + Sbjct: 180 RRDVLVVFDYRRYQLDVMAYASQAAALDVRILLFTDQWLSPIADLAEVTIVSPLEVAS-- 237 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + L ++ + A RI E + Sbjct: 238 --PYDTLAPAIAQMEALTAHIVSTLGDDARARIERIEKV 274 >UniRef50_C2HN51 Transcriptional regulator n=7 Tax=Lactobacillus RepID=C2HN51_LACAC Length = 270 Score = 121 bits (304), Expect = 2e-26, Method: Composition-based stats. Identities = 53/266 (19%), Positives = 95/266 (35%), Gaps = 22/266 (8%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + L S+K++ ++L P LS +LA + VS+S++ + +KLG Sbjct: 3 NLRSMVYNSGNKLNDSEKQIIQFVLNNPKDCSKLSLAKLAKKLYVSESAIFRLCKKLGLS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ LK L E S+ + + +E L + Sbjct: 63 GYSELKFDLVELAESRKKPIK---------------IENNFARELGKVNNDVLKYFKQRD 107 Query: 122 LHECVTMLRSARRIILTGIGASG-LVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASSP 179 + + A I + G L+AQ A +L +G A + L + + Sbjct: 108 FNSLYRDIDDAGTIYIYSTGWQQELIAQYLAHELFVVGKQATVLPSALDELKVAGRYAKK 167 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKV--LAITGFTPNALQQRASHCLYTIAEEQAT 237 D+L IS+TG + +N ++ V K ++ T N L + H +Y Sbjct: 168 GDVLFIISFTGDNKTINEEITKLELVNDKFRYVSFTNMMQNKLASLSQHNIYFPTIAFTD 227 Query: 238 NSASIS---ACHAQGMLTDLLFIALI 260 ++ + A L LL + Sbjct: 228 DADFKTGKVAFTPAYYLIGLLISEYV 253 >UniRef50_C2HLE6 Transcriptional regulator n=8 Tax=Lactobacillus RepID=C2HLE6_LACAC Length = 260 Score = 121 bits (304), Expect = 2e-26, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 109/266 (40%), Gaps = 17/266 (6%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + ++ + L ++DK + YLL P+ A LS +LA + VS+S++ + ++KLG Sbjct: 3 MDLETAVMKKKESLNETDKAIVSYLLKYPEDASKLSLMELAQKLYVSKSAIFRLSKKLGL 62 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF LK L+E + + + ++ ++ L + + T + Sbjct: 63 SGFSELKFELTE--LTNKKVQNKKYVQELDFNNNLHQIID-----------ETFKYFKDA 109 Query: 121 KLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASS 178 H+ L +A I + G ++A+ A IG A + + ++ Sbjct: 110 NFHDLFIDLDNAETIYIYSTGWQQQIIAEYLAHSFFLIGKKAIILPSAKDEVAMLGRSIE 169 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRV--GGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 +D+L IS+ G + + ++ V K +++T + P + + + + Sbjct: 170 ENDMLFVISFGGFNKTIIEELKKIDTVTDKLKFVSLTSWQPGKIASLSDYSFFFKTTPFQ 229 Query: 237 TNSASISACHAQGMLTDLLFIALIQQ 262 ++ + + +L DL+ + Sbjct: 230 ISNQNAVTFSSAYVLIDLIINEYGKH 255 >UniRef50_C7T7R2 Transcriptional regulator, RpiR family n=7 Tax=Lactobacillus RepID=C7T7R2_LACRG Length = 247 Score = 121 bits (304), Expect = 2e-26, Method: Composition-based stats. Identities = 39/255 (15%), Positives = 82/255 (32%), Gaps = 23/255 (9%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + + L +++ + YL+ D L + +A S ++V++ A K+GY Sbjct: 1 MKLEKLVAGK--NLTETEFTVLRYLVANIDRVLDLGVRGVAKANYTSATTVMRLAHKMGY 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +GF ++ L L + A L+ N Sbjct: 59 RGFVEMQYKLMTMLRHGEAGMQPVDATEDPLQS------------------AVLDQNDAT 100 Query: 121 KLHECVTML--RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 + + ++ + L G SG++ Q K +G + Sbjct: 101 TIRAVAQQIAAVESQYLYLYAAGFSGVIGQYMFKKFQILGKRCFFSTPGDSAALLENYLE 160 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 L + +S +G + + A + + V+A TG + L + A L + Sbjct: 161 DLGLFIVVSKSGETQSVIDKAALVSSLPVPVVAFTGNADSTLAKMADWTLKVADDFPLDE 220 Query: 239 SASISA-CHAQGMLT 252 ++ + Q + Sbjct: 221 LNQRASLFYPQMLAL 235 >UniRef50_Q1GH80 Transcriptional regulator, RpiR family n=6 Tax=Rhodobacterales RepID=Q1GH80_SILST Length = 295 Score = 121 bits (304), Expect = 2e-26, Method: Composition-based stats. Identities = 49/281 (17%), Positives = 107/281 (38%), Gaps = 16/281 (5%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 + R+++ L+ + A Y++ P S + A +A VS ++V+ +++LG+ + Sbjct: 10 ITRLKEELSDLSPRLQVAAKYIVDHPADFGLDSIRDTARKAEVSTYTLVRISERLGFDSY 69 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAM---YATLNVNSEE 120 ++ AL + + P I +G+K + +M +L + Sbjct: 70 EDMRDPFRVALVAPTQFVDAP--EWINRWRESGELGQKQAEAALNSMAIVQRSLEGQNLR 127 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA--LLATVQASS 178 +L ML A+ + LT + AS +A F + ++ + + H + + + Sbjct: 128 QLQRVAEMLLGAKNVYLTAVRASYSIAYYFHYV-GRMALPSLQLIPRHINSAIDELNYAD 186 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT--PNALQQRASHCLYTIAEEQA 236 D+++AI+ T RE A + + G K++ I+ + L Sbjct: 187 EGDVMIAITLTPYSRETIEACEFARKKGVKLVMISDSEVISSKFTPE--ETLVAST---- 240 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 ++ + + L L+ + +RI E L Sbjct: 241 LSTHHFGCYTGVMAVAENLVSLLVALGGQDVKDRITSYETL 281 >UniRef50_C9XKC3 RpiR-family transcriptional regulator n=4 Tax=Clostridium difficile RepID=C9XKC3_CLODC Length = 249 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 96/269 (35%), Gaps = 24/269 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + Q Y L ++DK + +L+ R+ S +++ANE VS++++++ +K+G Sbjct: 1 MRLESLVNQSYNSLNENDKIIIKQILICQREYRNFSCEKIANECNVSRATLLRLCRKIGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F LK L + + + +N + Sbjct: 61 DSFSDLKYLLKNNQLEFVNNDNN-------------------FHDVCENYRLLMNELQKI 101 Query: 121 KLHECVTMLRSARRIILTGIGASG-LVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + ++ A I + G G +AQ + +G + D+ + ++ Sbjct: 102 SFQDICKIIYDAETIYIYGTGNEQKSLAQEIKRIFLSVGKCVIDLFDIGEIEFMRESFQK 161 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DL + IS +G + A + +++T N + + LY + + Sbjct: 162 SDLFIIISLSGETKSGIEIAKFI-NNHIHTISLTRLDNNTIATLCEYNLYVETQ-KLDTL 219 Query: 240 ASISACH--AQGMLTDLLFIALIQQDLEL 266 +IS A L DLL + I+ Sbjct: 220 QAISYEVVGAFYALLDLLHMNYIEYRRRK 248 >UniRef50_C9A749 Putative uncharacterized protein n=1 Tax=Enterococcus casseliflavus EC20 RepID=C9A749_ENTCA Length = 256 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 35/261 (13%), Positives = 88/261 (33%), Gaps = 26/261 (9%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 L + ++ ++ + + ++LA E S +S+ +F +K F K+ Sbjct: 5 DYNPELTALEYEVYRFVSKNLASVSKMKMKELAKETHTSTASISRFCKKFECDTFTEFKI 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L + ++I D + + + E++ + Sbjct: 65 NLR-------FYLDSLVKSKISDSDESQTI---------DFLKRVNQPFLSERIDRATEI 108 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQ--ASSPDDLLLAI 186 L++ ++ G G S +A+ A +G A V D ++ + Sbjct: 109 LKNKSFVLFIGSGLSETIAEYGALYFTDLGKTALKVDDPSNYPIDWFPEDILCKTGIIVL 168 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS----- 241 S +G +E+ ++ + +++AIT + + Q + + E + AS Sbjct: 169 SISGETQEMIRYLQKLNQKDCQIIAITNTEDSTISQLSDLTVPYYIERETIFKASQKKEK 228 Query: 242 ---ISACHAQGMLTDLLFIAL 259 +++ L + + + Sbjct: 229 TIELTSQLPAIYLIEKIAKRI 249 >UniRef50_C7RFE2 Transcriptional regulator, RpiR family n=1 Tax=Anaerococcus prevotii DSM 20548 RepID=C7RFE2_ANAPD Length = 243 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 59/260 (22%), Positives = 103/260 (39%), Gaps = 26/260 (10%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + I + L++S+ + D + H++ L+ VS S++ +FAQKLG+ G Sbjct: 9 IMDIISSKNIKLSKSENIIVDKIKDINVDFSHININDLSEILKVSNSTITRFAQKLGFDG 68 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK +S+ + + I A TL+ Sbjct: 69 FSELKFDISKKPRRTKSL--------------SQEIYINFINSIEAFDEKTLSFIKSFD- 113 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF-NAAAVRDMHALLATVQASSPDD 181 S RI + GIG+SGL A F +K +IG N ++ +++ ++ D Sbjct: 114 --------SFGRIAVIGIGSSGLCANEFVYKFGEIGLNNTDYAKEPYSINLLTKSLDAKD 165 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 LL+AIS +G L +LAITG + L+ A++ + + S Sbjct: 166 LLIAISLSGENNNLLEGVRFAKDKNANILAITGNNESTLKNIATNTILLP--PYPSYSYK 223 Query: 242 ISACHAQGMLTDLLFIALIQ 261 IS ++ D++ A + Sbjct: 224 ISKIFPVTLILDMICEAYLS 243 >UniRef50_Q0C3E7 Sugar isomerase, KpsF/GutQ family n=2 Tax=Alphaproteobacteria RepID=Q0C3E7_HYPNA Length = 342 Score = 121 bits (303), Expect = 3e-26, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 63/179 (35%), Gaps = 2/179 (1%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWK 153 + +I+ A+ T+L + R +I+ G+G SG + Q A Sbjct: 26 SDLDLARNVIRTERNALEKLEQTLGPSLEEAVSTILATDRHVIVAGVGKSGHIGQKIAAS 85 Query: 154 LMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 L G + + A + P +++AISY+G REL ++A+T Sbjct: 86 LASTGTPSFFLHPTEASHGDLGMIVPGSVVIAISYSGESRELIDLLRYCKSNAIPLIAMT 145 Query: 214 GFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDLELAPER 270 + L + A L E A S+ L D L I L+ + + Sbjct: 146 RARESTLGRYADVLLELPTVPEACPNGLAPTSSTTMALALGDALTIVLMARRGFSTEDF 204 >UniRef50_C4XF00 Putative uncharacterized protein n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XF00_MYCFE Length = 274 Score = 121 bits (303), Expect = 3e-26, Method: Composition-based stats. Identities = 46/272 (16%), Positives = 101/272 (37%), Gaps = 16/272 (5%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 + +++K+ DY+ P+ S ++ A E S + + + +KLG+ + ++ + Sbjct: 11 MTNAEQKIIDYINENPNEFAENSIEKNAVETFASTAVLSRIYKKLGFSSYKDMQFYVKYN 70 Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR 133 S + P + N I K+ K A+ T +++ + ++ Sbjct: 71 YLSNLKIPKELLDNSIY----------KIAKTYMEAINLTSKYLDIKEIDYICEEINKSK 120 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS---SPDDLLLAISYTG 190 + GIG+S + A+ + + K + + D H L ++ + ++ S +G Sbjct: 121 LVYCFGIGSSSISAKELSLNIEKFDYYSVFHNDFHNFLISLYSHELKENKPPVILFSKSG 180 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGM 250 E+ + +L L IT +L+ + H L EQ ++S+ Q Sbjct: 181 KTNEILFLCETLLEHKFPFLLITANR--SLKNKYPHVLLHETIEQKERYHALSSKIVQQY 238 Query: 251 LTDLLFIALIQQDLEL-APERIRHSEALVKKL 281 + D++ LI + L Sbjct: 239 IADIIADHLISNSPNKLNRKNWLKMINEWNNL 270 >UniRef50_A0K0Z5 Transcriptional regulator, RpiR family n=3 Tax=Micrococcineae RepID=A0K0Z5_ARTS2 Length = 299 Score = 121 bits (303), Expect = 3e-26, Method: Composition-based stats. Identities = 54/269 (20%), Positives = 105/269 (39%), Gaps = 10/269 (3%) Query: 14 LAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA 73 L+++ ++ D + P + + ++A A V+ S+VV+ AQ LGY+G+P L+ L Sbjct: 35 LSKAQSRVVDVIARNPQLSSYADIAEIAQRADVNNSTVVRTAQHLGYRGWPDLQRELRSR 94 Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR 133 + + + R I + + TL+ N+ + + + +A+ Sbjct: 95 YLVMIST-----EDTLTEHGEHRSPLHDAINHDIENLRLTLDSNTGDDAEAAIAAMAAAK 149 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA-SSPDDLLLAISYTGVR 192 I G+G+ A A +G+ LA+ D+L+ I+ Sbjct: 150 SITAVGLGSFAGPASVMAHLGSTMGYPITLENRAGVHLASSTNTLGEGDVLVVINMWRSI 209 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLT 252 R++ + A+ + G V+AI+ L A H L +E + + A + Sbjct: 210 RQIIVTAEAAKQAGATVIAISDMRRGRLAAAADHLLVVASEGISF----FQSVTAANSVV 265 Query: 253 DLLFIALIQQDLELAPERIRHSEALVKKL 281 L + E + IR ++ L K L Sbjct: 266 YGLLAGMEAAHPERSRAAIRRTQQLWKDL 294 >UniRef50_D1AGI8 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AGI8_SEBTE Length = 243 Score = 121 bits (303), Expect = 3e-26, Method: Composition-based stats. Identities = 46/267 (17%), Positives = 95/267 (35%), Gaps = 27/267 (10%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + L +DK + DY+ DT + +A + S SS+++ ++KLGY Sbjct: 1 MNIERTFKGI--KLTSNDKIILDYITKNIDTCLEEGVRGVAKNSFSSTSSIMRLSKKLGY 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF L L + + ++ +K+ T N ++ Sbjct: 59 SGFVELIYDLKKKMTAKKSEKINI------------SFFDKI----------TFNTRNKS 96 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ + + + + I+ G G S + + KL+ +G + + + +++ Sbjct: 97 EIDQFLKRIHRGK-IMTYGEGFSEIASSYMYRKLLTLGKIVYLLHGIDFDILCEKSAMKF 155 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DLLL +S +G + A + V + TG + L + + + Sbjct: 156 DLLLIVSKSGETKHCIKLAKQAKEENITVCSFTGNAASHLAKLSDISFTYNDPHTLDDDV 215 Query: 241 SISACHAQGMLTDLLFIALIQQDLELA 267 + F LI++ E Sbjct: 216 YYPNPFIGLCIIG--FEELIRRYFEKY 240 >UniRef50_A1A2Z7 Putative RpiR-family transcriptional regulatory protein n=2 Tax=Bifidobacterium adolescentis RepID=A1A2Z7_BIFAA Length = 295 Score = 120 bits (302), Expect = 4e-26, Method: Composition-based stats. Identities = 41/278 (14%), Positives = 100/278 (35%), Gaps = 13/278 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + RIR+ + L ++++ A ++L +S +L+ +G+SQ ++ + +KLGY Sbjct: 20 LVARIRESFDSLTATEREAAQFILGHLTDVLVCNSVELSQLSGISQPTLSRLYRKLGYAN 79 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + + S + ++ + ++ T +L Sbjct: 80 AGEFRRDVRRVHRPGSPELSRHTQC--------DDLVADHLRRDEESLKRTFEGIDRAQL 131 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSPDD 181 + +A + + G +S VA + +LM++ N + + + + + D Sbjct: 132 SSACQAMATAPHVAVVGYHSSYPVALHMREQLMRLRGNVDILPNPGQSIAEDLVDYAAGD 191 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +++ I + D ML G V+ I + + A + +S Sbjct: 192 VIVIIGVGRRLPFFSRLIDVMLERGLTVVVIGDIS----ARNAVIGRNVAFFKVVLSSHV 247 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 +++ A L L+ + + ++ E E + Sbjct: 248 LTSFTAAFALIALMVDEVGKCLVDTEDEVHARIEGIND 285 >UniRef50_C9LT74 Arabinose 5-phosphate isomerase n=2 Tax=Bacteria RepID=C9LT74_9FIRM Length = 377 Score = 120 bits (302), Expect = 4e-26, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 79/206 (38%), Gaps = 2/206 (0%) Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 + + + + S Q D + + + AA+ EE Sbjct: 29 RAVYNREVDFLVDLQSNGKGEQRMKRDVIWEKAVETLSMEAAAVKKLTESVDEEFCRAVE 88 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 +L RI++TG+G SG V + A L G + + A + + D++LAI Sbjct: 89 CVLDCTARIVVTGMGKSGHVGRKIAATLASTGTPSFFMHPAEAFHGDLGMVTDKDVVLAI 148 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ--ATNSASISA 244 S +G +E+ + R+G ++A+TG + L + + + + E + A ++ Sbjct: 149 SNSGEVQEVVKILPVIHRIGATIIAMTGNRSSQLAEYSDYVIDIGHEPEACPLGLAPTTS 208 Query: 245 CHAQGMLTDLLFIALIQQDLELAPER 270 A + D + +A++ + Sbjct: 209 TTATLAMGDAIAVAVMSVRNFKKQDF 234 >UniRef50_C1I6H5 Predicted protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I6H5_9CLOT Length = 253 Score = 120 bits (302), Expect = 4e-26, Method: Composition-based stats. Identities = 53/263 (20%), Positives = 106/263 (40%), Gaps = 10/263 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + I QS+ K+ + +L PD A + VS+S++++F QK GY Sbjct: 1 MNPIDNILLHNDEFTQSEIKIKNIILTNPDIIACFPLVTAAYKMNVSKSALLRFCQKCGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGF K LS L S S I++ +++I + N + Sbjct: 61 KGFSEFKYELSRYLHSGNLSNEKIINDSS----------QEIINLFIEKLTLLKESNLDN 110 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L + + +I + G+ +GL A++ ++L IG ++ ++ D + SS + Sbjct: 111 QLEALSEDILKSNKIKIYGVHETGLAARHLQYRLTTIGIDSESITDSSLIAEKALFSSQN 170 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL + S + + + + + + IT ++ + ++ + A +S Sbjct: 171 DLNIYFSLSALTSIIVESIKNSISNNSNIALITQNNKTKFSKQIPNIIFLPSFSLAKDSF 230 Query: 241 SISACHAQGMLTDLLFIALIQQD 263 I + + +LL L + Sbjct: 231 FIDSQALNFVFIELLINKLSKLL 253 >UniRef50_C2BXZ0 RpiR family transcriptional regulator n=4 Tax=Bacilli RepID=C2BXZ0_LISGR Length = 251 Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats. Identities = 35/262 (13%), Positives = 90/262 (34%), Gaps = 17/262 (6%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 L+ D ++ Y+ + + + LA S +S+++F +K GF K+ Sbjct: 5 NYNPELSNIDVEIYKYVTSHLEKVVLMRIRDLAKATHCSTASILRFCKKFDCAGFSEFKI 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 L L E P ++ + + +E++ + Sbjct: 65 KLRIYLEEMEEIPKTHTVDE---------------SAFMNFIQRSSESFYQERIDAAADL 109 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA--SSPDDLLLAI 186 L ++ G G+S ++A+ A I A ++ D + + ++A+ Sbjct: 110 LADKDLVVFIGSGSSNIIAEYGALYFSSIFSMAFSIEDPENHPVSFFNKGLAEKTCVIAL 169 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S G + + + + +++IT + + + + + ++ + I++ Sbjct: 170 SVGGKTKSITNYLNHFIESNSSIISITNSANSTIARLSDINIPYYISTESIGDSDITSQV 229 Query: 247 AQGMLTDLLFIALIQQDLELAP 268 + L + ++ E A Sbjct: 230 PALYTVEYLAKEVRKKKAESAK 251 >UniRef50_D2BPU5 Transcriptional regulator, RpiR family n=4 Tax=Lactococcus lactis RepID=D2BPU5_LACLK Length = 251 Score = 120 bits (301), Expect = 6e-26, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 108/264 (40%), Gaps = 22/264 (8%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + + ++ + L + + +++L + +S +QLA VS ++V++ +KLG++G Sbjct: 1 MIDFLPEQVRTLNELETATFNFILSNLSSIDKMSVRQLAQAVHVSTATVMRMTRKLGFEG 60 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + LK L + + L L K+ + KL Sbjct: 61 WVELKYYLKNQNQLTEIPVNYYENLLQ-----LDLFLRKITSKEA-----------GRKL 104 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 E V ++R AR II G+G+SG +A+ A IG + A+ D A +PD L Sbjct: 105 EEAVKLIREARYIIFIGVGSSGALAEYGARYFTNIGLESYAISDP--YQAVKGKGAPDVL 162 Query: 183 LLAISYTGVRRELNLAADEML-RVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 + +S +G ++ ++ K+++IT L + ++ L + + + Sbjct: 163 SIVLSASGETDKIIERVVKLREEAPAKIISITNHPETTLSKLSNINLTYGFQTEYSAYDP 222 Query: 242 ---ISACHAQGMLTDLLFIALIQQ 262 +++ ++L +++ Sbjct: 223 LENLTSQLPVIAFIEILAHQAMEK 246 >UniRef50_UPI0001788C32 transcriptional regulator, RpiR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C32 Length = 280 Score = 120 bits (301), Expect = 6e-26, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 115/267 (43%), Gaps = 9/267 (3%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 GL+ S K+AD++ P+ ++ Q++A+ G S ++V +F + +G++ A KL L Sbjct: 9 SGLSPSQLKIADFIERNPEEMLFMTEQEIADRLGTSIATVSRFWRAVGHENAKAFKLMLR 68 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 E+ + P +++ + K++++ + T+ N ++L E ++ S Sbjct: 69 ESSDTTPAVKLEKTISRL----DASSLPAKMLEQAKHHLQDTMEKNRPDELEEAAGLMAS 124 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNA-AAVRDMHALLATVQASSPDDLLLAISYTG 190 ARR+ + G S + + +++L + G + H LL ++ +D++L S+T Sbjct: 125 ARRVYVHAPGPSLSLGELLSYRLSRFGMSVRIMAGSGHELLESLAHMEREDVVLIFSFTR 184 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGM 250 + E + D + RV + IT A + + + + Sbjct: 185 MLPETEVILDCVSRVQNAAIMITDREEFRYGTPAQISFFVSRGD----MGEFHSMVTPLL 240 Query: 251 LTDLLFIALIQQDLELAPERIRHSEAL 277 L + L +++ + E ++ + L Sbjct: 241 LIEQLILSMGMLNKEKVLSKLDYLGEL 267 >UniRef50_D1ARL0 Transcriptional regulator, RpiR family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1ARL0_SEBTE Length = 251 Score = 120 bits (301), Expect = 6e-26, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 101/262 (38%), Gaps = 19/262 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + I + Y+ L +D + +Y+ P+T ++ L+ S +S+++ +KLG+ Sbjct: 1 MKLDVLINKYYEKLNSNDLYILNYIKNNPET-SDVNITLLSKMCNSSTASILRMTKKLGF 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ K L AS+ +++ + + Sbjct: 60 SGYSEFKYFLKSLTASKESQDLKTRL--------------EVLASDVEHTMKIFK--NNN 103 Query: 121 KLHECVTMLRSARRIILTGIG-ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 +L E +L +A+ I G G L+ Q F+ ++ G N + VQ Sbjct: 104 QLSETCDLLYNAKNIYAYGTGYGQKLMLQEFSRCMLNCGKNIIIIPAFTEFRIAVQNMKE 163 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE-QATN 238 D+++ S +G R++ + +L+IT F N L + + LY + + Sbjct: 164 SDMVIIASLSGNARDIAELIHILNLKNIPILSITNFNDNTLSKLTPYNLYYQSSNINTED 223 Query: 239 SASISACHAQGMLTDLLFIALI 260 S + S+ +L + ++ + Sbjct: 224 SLNNSSYVTLNLLLNFIYEGYM 245 >UniRef50_A6W9S6 Transcriptional regulator, RpiR family n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W9S6_KINRD Length = 285 Score = 120 bits (301), Expect = 6e-26, Method: Composition-based stats. Identities = 45/280 (16%), Positives = 98/280 (35%), Gaps = 13/280 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R+ + L +++++A ++L + D S +LA +G S+++V +F ++LG+ Sbjct: 12 VRERVDAAWPRLTPAERQVARFVLERADDLAGYSGAELAEASGASKATVSRFFRRLGFTS 71 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + + + SP D + + + T + + L Sbjct: 72 YAQAR--------TGARSPRARGVPTGGLPDSGGEPVAVHLAHDVENLTRTASALAAADL 123 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQASSPDD 181 T L ARR+++ G S VA + +L++ + A + + D Sbjct: 124 DAVTTALARARRVLVLGWRNSYPVALHLREQLVQARPDVAVGPLPGQTVAEELAGLDERD 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +L+ + + ++ A +G + +T +H L E + Sbjct: 184 VLVVVGFRRRTPTVSAAVRLAADLGVPCVLLTDPAAAPPPVPVAHRLVVPVEGP----GA 239 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + A M +L ++ +R R A L Sbjct: 240 FDSYAAVMMTVAVLAEGVLASRSGPGQDRTRAVAAAHDAL 279 >UniRef50_UPI000196ADBA hypothetical protein CATMIT_01190 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196ADBA Length = 252 Score = 120 bits (300), Expect = 7e-26, Method: Composition-based stats. Identities = 54/260 (20%), Positives = 101/260 (38%), Gaps = 19/260 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + Y L+ ++K + Y+ + +LA S+SSV++ AQKLGY Sbjct: 3 MDFDTQAGLIYSTLSDNEKDMIQYIRNHKSDVVEMPINELAKVLLSSKSSVLRLAQKLGY 62 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ LK +L + + + + EK KE T S+ Sbjct: 63 TGYSELKYSLKKDIVKKAVV--------------PTDLVEKFRKEI----DKTFEYASQV 104 Query: 121 KLHECVTMLRSARRIILTGIGASG-LVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 ++ + AR++IL G + + F+ +L G + V + + Sbjct: 105 NFATLISEIHKARQVILYATGFTQNNYTKQFSSELFMSGRSNYIVSGETNFEVISHSLTS 164 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD ++ IS +G + +E+ +L+IT N L + + + LY E Sbjct: 165 DDFVIIISLSGNTPGIRTIVNELNMKDIPILSITELGKNFLVENSDYQLYYNTTEFPLED 224 Query: 240 ASISACHAQGMLTDLLFIAL 259 I + +A G++ +L Sbjct: 225 EHIISMNAVGIILTILARKY 244 >UniRef50_B1R0N4 SIS domain protein n=2 Tax=Clostridium butyricum RepID=B1R0N4_CLOBU Length = 279 Score = 120 bits (300), Expect = 7e-26, Method: Composition-based stats. Identities = 45/269 (16%), Positives = 95/269 (35%), Gaps = 10/269 (3%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 +++K + D++L + + + ++ G+SQ +V +F +K+GY K A+ + Sbjct: 10 NFTKNEKIIYDFILSKKENLFLYTEIDISKMTGISQPTVSRFWRKIGYTNLKEFKEAVKD 69 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 S D + K++ + + + SE ++ V S Sbjct: 70 FHNQSSPSTK-----FKSILDSDEFYYKNYAKKSISLIEDSAEKISESDFNKAVEYFISC 124 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLA-TVQASSPDDLLLAISYTGV 191 +I GIG + + ++L + G N ++ LL + D+L++ ++ Sbjct: 125 DKIFTHGIGPAESLCSLLNFRLNRFGLNIDSINPSGQLLYEDLINIDKDNLIVLFLFSHY 184 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGML 251 E ++ D + KV+ IT Y E + Sbjct: 185 HPETHVILDYATEINCKVIIITDILIKPFNNHNIITFYVSRGELLE----FHSLVGPLFF 240 Query: 252 TDLLFIALIQQDLELAPERIRHSEALVKK 280 + L +A+ E++ E L K Sbjct: 241 IESLIVAIGISKSNEPLEKLHKLEELRNK 269 >UniRef50_Q7D403 Transcriptional regulator, RpiR family n=2 Tax=Alphaproteobacteria RepID=Q7D403_AGRT5 Length = 292 Score = 120 bits (300), Expect = 7e-26, Method: Composition-based stats. Identities = 53/276 (19%), Positives = 108/276 (39%), Gaps = 7/276 (2%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 I + L +D +L D L+ P A + + +++ AGV +S V+ A++LG+KG Sbjct: 10 LSDLISRHSTRLTDADTRLLDVLIKDPIRAAMENGKDVSSRAGVHPASAVRLARRLGFKG 69 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRL--VGEKLIKENTAAMYATLNVNSEE 120 +P ++ L L P + ++ AA+ N S+ Sbjct: 70 YPEFRVFLQSNLREGGGDFENPAARMAARLMRAEDNGLLASVLDSEIAALQQARNSVSDA 129 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAV-RDMHALLATVQASSP 179 + T LR +RRI + G G ++ A +L + G+ A + MH L+ + + Sbjct: 130 DIRAFSTSLRDSRRIFIFGRGHFAALSSLIALRLSRSGYEAIDLASQMHQLVEVLATLTA 189 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +D++L +++ L + R G K LA+T + H + + + Sbjct: 190 EDVVLFLAFRRAPPLLQEVREIAGRRGAKTLAVTDVGGTRIDPAPHHQILVSRGDPGESQ 249 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 + + + + + L D + + + + Sbjct: 250 ----SLVVPMTIANAIILDLASIDNGRSLQSLSEFK 281 >UniRef50_B1I1Y6 Glucosamine--fructose-6-phosphate aminotransferase, isomerizing n=5 Tax=Bacteria RepID=B1I1Y6_DESAP Length = 609 Score = 119 bits (299), Expect = 8e-26, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 85/277 (30%), Gaps = 30/277 (10%) Query: 16 QSDKKLAD---YLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 + + +A LL L+ +LA V+ Sbjct: 184 ERENFIASDIPALLAHTRDTYLLNDGELAEVT----PDGVRI---------SDF-----H 225 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLN-VNSEE-------KLHE 124 E V + K I E A+ TL ++ +L+ Sbjct: 226 GRPLAREIFQVHWEAEQAEKAGYDHFMLKEIHEQPRALRDTLRGRIDDDCRRAVLDELNL 285 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 +++ +I +T G + + + K+ V P DL++ Sbjct: 286 EPGFVKNLNKIFVTACGTAFHAGVVGKYIIEKLVRLPVEVDIASEFRYRDPLIGPGDLVV 345 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 +S +G + A E G +V+AIT +++ + A LYT A AS A Sbjct: 346 VVSQSGETADTRAALREAKSRGARVVAITNVVGSSIAREADSVLYTWA-GPEIAVASTKA 404 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 Q LL + L + L E +++L Sbjct: 405 YVTQLAAFYLLAVWLAGERGALPGEEREDLLRALREL 441 >UniRef50_C2BS39 Glutamine--fructose-6-phosphate transaminase, isomerizing n=5 Tax=Actinomycetales RepID=C2BS39_9ACTO Length = 669 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 42/219 (19%), Positives = 73/219 (33%), Gaps = 8/219 (3%) Query: 70 LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYAT-------LNVNSEEKL 122 +++ A + + V + EK I+E A+ T + ++L Sbjct: 281 IAQDPAQRKRAYEVDFATDRVTKEGFDTFMEKEIREQPRAVGDTVAGRLDAAEALTLDEL 340 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + RS +I+ G + Q + + V H S L Sbjct: 341 RIESEVFRSITSVIIVACGTASYAGQVARYAIEHWCRIPCEVELAHEFRYRDPVVSRRTL 400 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++AIS +G + +A G +VLAI + + + A L T A AS Sbjct: 401 VVAISQSGETMDTIMAIRHAREQGARVLAIVNTPGSTISREADAVLLTHA-GPEIAVAST 459 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 A AQ LL + L Q + I + ++ Sbjct: 460 KAFTAQIAACYLLGLYLAQVRGNKYADEIEDYLEKLGQM 498 >UniRef50_C3RP07 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RP07_9MOLU Length = 250 Score = 119 bits (298), Expect = 1e-25, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 92/251 (36%), Gaps = 19/251 (7%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L++++K+L YL ++ QLA +S +S+++F KLG GF LK L + Sbjct: 12 DLSENEKELLYYLENSCKEVVSMTLSQLAKATYMSNASIMRFCNKLGLSGFNELKYELKQ 71 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 ++ + + + +I++ + L + E + E V +L S Sbjct: 72 SMHQEIDY-------------------QMIIEKPLSRFLDNLKNLNYEIIEEVVDLLCSP 112 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVR 192 + I + G S + A F L I N + D+H + + +S Sbjct: 113 QPIYVVGRSLSLVAADYFQTILSSIDINCILINDLHLSKSVFNNLKAPATIFIVSANNAG 172 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLT 252 + + K++ +T +L + L + E + I++ + Sbjct: 173 KIYDEVVTIAKTHDCKIILLTSNAKGSLVDSCDYVLSSNDENLTYHGVDINSRLGIFTIM 232 Query: 253 DLLFIALIQQD 263 ++ Q+ Sbjct: 233 QIIIELTAQKL 243 >UniRef50_A9DTL4 Transcriptional regulator, RpiR family protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DTL4_9RHOB Length = 309 Score = 119 bits (298), Expect = 1e-25, Method: Composition-based stats. Identities = 42/270 (15%), Positives = 95/270 (35%), Gaps = 5/270 (1%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L++++ ++A ++ D ++ LA AGVS+ +V +F ++LGY+ F A K A++ Sbjct: 21 NLSKAESEVALWVERNFDNLPFETAADLAVGAGVSEMTVSRFVRRLGYENFKAFKAAVNA 80 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 +I D + ++ A+ + + + + +++ A Sbjct: 81 EFRKSDSDEGSLRSRRIAIPDGTGSELDAQLQLELDAIVEVYRMAATPQWDAALDVVQKA 140 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD-LLLAISYTGV 191 + + +TG A +FA +L + + P ++ + Sbjct: 141 QHVNITGFQGVKGTAMDFATRLKYARPGVRFADGRSGNWSELFIEEPQTSCVIMVEVVPY 200 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGML 251 E A+ LR ++ +T ++ H L + + + L Sbjct: 201 AHEAVKVAELCLRRDVPLIMVTDQYSAWPRKYTPHVLSVATSTRTF----LDSTAGIAAL 256 Query: 252 TDLLFIALIQQDLELAPERIRHSEALVKKL 281 L + + A +R+R L Sbjct: 257 LGLFLSGITARVGAPAQDRLREMRELAAHF 286 >UniRef50_A2RL75 Putative HTH-type transcriptional regulator n=1 Tax=Lactococcus lactis subsp. cremoris MG1363 RepID=A2RL75_LACLM Length = 241 Score = 119 bits (298), Expect = 1e-25, Method: Composition-based stats. Identities = 49/263 (18%), Positives = 102/263 (38%), Gaps = 26/263 (9%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M L ++ ++ L +++K + +YL + + + +A EA SSV++ KLGY Sbjct: 1 MAFLGKVD--FKNLTETEKVIYNYLRNNFEKIPRMHVRDIALEAHAGASSVMRLIHKLGY 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + + + + + + I +LI++ L Sbjct: 59 HSYYQFQEFV------EKQQLKASTDSDIFQLLSASHYPSELIEKCRQLTEQVL------ 106 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 A II G+G SG + + + +G NA ++ DM L + S D Sbjct: 107 ----------KADSIIFFGLGTSGNICEYAMRRFATLGLNALSLTDMTYPLESHLLESQD 156 Query: 181 DLLLAISYTGVRRELNLAADEMLRV-GGKVLAITGFTPNALQQRASHCLYTIAEEQATN- 238 L++ S +G EL + +++IT ++L Q ++ + EE+ N Sbjct: 157 SLIVVFSISGETGELIEILQHIRNREKVMIISITPKKESSLAQLSNLSINYKVEERRVNL 216 Query: 239 SASISACHAQGMLTDLLFIALIQ 261 +++ +T++L + + Sbjct: 217 YGDLTSQIPAIFITEVLSEMIFK 239 >UniRef50_Q8EMY0 Putative uncharacterized protein OB2710 n=1 Tax=Oceanobacillus iheyensis RepID=Q8EMY0_OCEIH Length = 276 Score = 119 bits (298), Expect = 1e-25, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 102/267 (38%), Gaps = 15/267 (5%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 R + + + KK+ YLL +P ++++ + VS++ V++F +GY+G+ Sbjct: 7 ERTKTNLPEMTKGLKKVGRYLLAEPIVFAIHPAKKVGSMIDVSETMVIRFCHFIGYRGYA 66 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 L+ + S+ N + E+ I+E+ + N+ + L++ Sbjct: 67 DLQKEVRH------HLISLENSNDKKNVSTKESNFEQFIEEDVKNLKQMKNIIDVDVLND 120 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 + + + ++I+ G S A F++ L I NA+ R ++ ++ Sbjct: 121 VIERILDSEKVIVAGYYHSFSFAHWFSFNLNYIVGNASLFRPESDAGI-LELMPKKSCII 179 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA---TNSAS 241 S+ + A+E + G V+ IT + + A + + + + Sbjct: 180 IFSFFRYAIDTIRLAEEAKKKGVPVIVITDSWASPAAEYADFVISIYSSDNSNVLLQKGP 239 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAP 268 I+ L + + LI Q + Sbjct: 240 IT-----MSLMNSILSKLIDQVQDRGK 261 >UniRef50_UPI00016C007A transcriptional regulator, RpiR family protein n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C007A Length = 255 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 95/263 (36%), Gaps = 20/263 (7%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N + Y L + + Y+ P+ + + + +A +S +S+++F +KLGY Sbjct: 4 NIINLNYDIYSKLTKLETDFLSYINQNPEFVIQNTIKDIGTDAFISPASIIRFCKKLGYS 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F + L ++P + +K+I+ LN K Sbjct: 64 SFSEFRYHLRTLFINKPNNLQN----------------KKIIEVINHQFNLYLNAIDISK 107 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + E V +L + I+L G G + A +L + + + RD Sbjct: 108 IIEIVPLLTQS-NILLYGKGTNAYFIDYLATQLSLLNLSVLSYRDAQLAKVYASNIGQGG 166 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE---EQATN 238 + L + Y+G + A + K++ IT ++L A +CL E ++ Sbjct: 167 IALILCYSGETQVSIDLALSAKQNHYKIILITRNIQSSLASIADYCLLIPEEALNSYSSK 226 Query: 239 SASISACHAQGMLTDLLFIALIQ 261 + + L D+L +I Sbjct: 227 NIHVKTNFCLVCLMDILLQYIIS 249 >UniRef50_UPI000196AA29 hypothetical protein CATMIT_01879 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196AA29 Length = 279 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 32/260 (12%), Positives = 92/260 (35%), Gaps = 3/260 (1%) Query: 2 NGLLRIRQRYQGLAQSD--KKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 + L + + D +A +L + +S LA S +++ +F + L Sbjct: 12 DILYLLMTYVNFSSGQDMYYSIAKTILTHLEQIPSISINDLAELCYTSPATISRFCKDLN 71 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 + F K ++ AL + + + + + +K+ + ++ Sbjct: 72 CRNFATFKKEMAIALEIAHDEIHFSFDDDFKIKKNPQYLVDKVYDDTKKSLELGQQQLDI 131 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + + ++ A + + G S + Q+F K++K+ A + + + Sbjct: 132 NDVDKICELIHDAPHVFMIGYQFSRIACQDFQLKMLKLEKFLYAFANRGDEVQKLDLIEE 191 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 +DL++ ++ + ++ + + ++L +T + + EE Sbjct: 192 NDLVIIVTVRARKELIDSLITRIKKQKARILIVTMNKDYT-NPEVDYYYHLNGEESDYTQ 250 Query: 240 ASISACHAQGMLTDLLFIAL 259 +SIS +++++ Sbjct: 251 SSISGFIDTVSFFNVVYLRY 270 >UniRef50_C8S1A0 Transcriptional regulator, RpiR family n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1A0_9RHOB Length = 310 Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats. Identities = 47/282 (16%), Positives = 92/282 (32%), Gaps = 5/282 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + R+ +G +++ LA YLL ++ +A + GVS++SV +F + +GY+ Sbjct: 21 DLRQRLAAAAEGGTPAERALAHYLLSNLSVLPFETAAAVALKVGVSEASVGRFCRSIGYR 80 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 LK +L L + +H+ R + ++ AA+ A + + Sbjct: 81 HLKELKSSLQMDLGEKAWLIGDRLHDFHRRSREGGAELARALEHEIAALVAVYEIAASPA 140 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 V L + + G A A L + A + + P++ Sbjct: 141 FEATVKRLAHRNAVWVAGFQTERGHAAELAHNLQYLRPGVHLADASDGHFAEILLAEPEE 200 Query: 182 L-LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 + L+ I R A G V +T + + + Sbjct: 201 VTLVLIDGRRYSRLTRDLAMAAHDAGIPVTLVTDPYCDWAPGLVTEVFAVPTDLNHFWD- 259 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 A L L+ + ++ R+ AL L+ Sbjct: 260 ---TTSAMSSLIGLMVNGVFRELGAGVELRMARVSALYGDLI 298 >UniRef50_UPI000050FE27 transcriptional regulator, RpiR family protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FE27 Length = 285 Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 95/267 (35%), Gaps = 12/267 (4%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L ++ K + + P+ A + S+Q LA+ A V+ ++VV+ AQ LGY G+PA + Sbjct: 21 RLTRATKTILGVIKTDPEEAAYCSAQALADIAEVNVATVVRAAQSLGYSGWPAFSAEIRT 80 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 + S+ +HN+ +G + I ++ + + E L+ + ++ Sbjct: 81 RYLASLSPRSLYLHNRSQG------LLATTIDKDIELLERMRDGLDESTLNRMSEHIIAS 134 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA-SSPDDLLLAISYTGV 191 + G+ + +G+ + + D LAI+ Sbjct: 135 ESTGVFATGSYAAPGMQLSHVAQMLGYRVRLHSGSVTSMVNEVNLLTSHDCFLAITLWKS 194 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGML 251 R + A+ G KVL I AL A + AE IS+ Sbjct: 195 SRAVVQLAEVAREQGAKVLVIADRR-TALTDIADEYVLVPAESSEL----ISSLVCATSA 249 Query: 252 TDLLFIALIQQDLELAPERIRHSEALV 278 L L + D E + + L Sbjct: 250 VQYLLGCLARHDEERTQSMLGRIDDLW 276 >UniRef50_Q0FH55 Sugar isomerase (SIS) n=2 Tax=Rhodobacteraceae RepID=Q0FH55_9RHOB Length = 285 Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats. Identities = 57/280 (20%), Positives = 101/280 (36%), Gaps = 12/280 (4%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R+ + Y L ++++AD LL P L++ +LA AGVS ++V +F ++LGY+ Sbjct: 13 ISRRVHEAYGSLPDGERRIADVLLGNPGELAMLTATELAAAAGVSNATVSRFFRRLGYES 72 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F K + + + L++ + +TL + L Sbjct: 73 FEQAKRQARRLRETGSPLYTGSATPASKRISD-------LLQSEVTVLESTLTRLNPVTL 125 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAA-AVRDMHALLATVQASSPDD 181 E V + +A RI G S +AQ +L +I + + + D Sbjct: 126 REIVEAMATAPRIRTLGYRNSHFLAQYVTAQLGQIRRAVSPLLLPGQTQAEGIALMDKGD 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L + I E+ R G ++L IT T A+ + E + A Sbjct: 186 LAVVIGLRRRPAGFTSVVQEISRRGARILLITDKTIREAPAHATWTIDCQVETAQYSDA- 244 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + LL + + E + EAL ++L Sbjct: 245 ---YSGALAVLRLLAVETRRALGEAGQTYLEEVEALRERL 281 >UniRef50_A5V7B7 Transcriptional regulator, RpiR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V7B7_SPHWW Length = 309 Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 99/280 (35%), Gaps = 5/280 (1%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L R++ G +++ +A +++ T +++ LA + GVS+ ++ +FA+KLG++ Sbjct: 20 LLRRLQAGLDGYTAAERAVAGHIVAHYGTLAFETAESLATKVGVSEITIGRFARKLGFRN 79 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F ALK L +A + + + A+ A + Sbjct: 80 FKALKNELKDATVQAMPWLIGEELAEFVESPGEPSDRDGNRQREMNALLAVYRLAETPGW 139 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSPDD 181 +L AR + + G +A A L + V + D Sbjct: 140 AAAARLLAQARTVQIAGFQTERGIATLLANHLQFMRDGVRLVDLGAGNYADIFATDTSDT 199 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L+ I R+ L A++ + G ++ +T + Q+ H L + S+ Sbjct: 200 CLVVIDIRRYSRQSYLVAEQASQQGIPLIVLTDLFCDWAQRFTPHVLAVPTQTGLFWSSP 259 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 A +LL +I+ +R+ L + Sbjct: 260 ----VALVCAANLLVNDVIKLIGPGVEQRLEQLTRLHQSF 295 >UniRef50_Q5JH71 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=53 Tax=cellular organisms RepID=GLMS_PYRKO Length = 602 Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats. Identities = 38/257 (14%), Positives = 76/257 (29%), Gaps = 20/257 (7%) Query: 25 LLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVP 84 L + L + A S + K G + +P Sbjct: 198 FLEYTNKVIFLDDGEYAILTKDS------YVVKRIDTG----------EVVEKPVHEISW 241 Query: 85 IHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASG 144 + +++ ++ A A + E + + + +II +G S Sbjct: 242 TLEMAEKAGYPHFMLKEIYEQPRAIKDAIHG--NREIIRSVAEEIANYDKIIFVAMGTSY 299 Query: 145 LVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS-SPDDLLLAISYTGVRRELNLAADEML 203 A ++ V + + L++AI+ +G + A Sbjct: 300 HAALVGKSLFQRLAKKVPIVEEASEFRYEFEDLIDDKTLVIAITQSGETADTLAAMKLAK 359 Query: 204 RVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQD 263 + G KVLA+ + + A LYT A A+ Q + +L I L + Sbjct: 360 KNGAKVLAVVNVVGSMATRIADLTLYTHA-GPEIGVAATKTYTTQLTVLTMLAIELAKVL 418 Query: 264 LELAPERIRHSEALVKK 280 + + + E + K Sbjct: 419 GTASEDYLEKLEDELMK 435 Score = 47.7 bits (112), Expect = 4e-04, Method: Composition-based stats. Identities = 28/174 (16%), Positives = 51/174 (29%), Gaps = 11/174 (6%) Query: 96 RLVGEKLIKENTAAMYATLNVNSEEK-LHECVTMLRSARRIILTGIGASGLVAQNFAWKL 154 EKL E ++ L E L+ R G G S A A KL Sbjct: 423 EDYLEKLEDELMKVPELVELALKHDEALRELAETLKDKRDFFYIGRGISVPTALEGALKL 482 Query: 155 MKIG-FNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRE-LNLAADEMLRVGGKVLAI 212 +I +A + + ++AI+ +G + + +E G ++++ Sbjct: 483 KEISYIHAEGLSAGELKHGPLALLEDGVPVVAINPSGKVFDKMVSNIEEAKARGAMIISL 542 Query: 213 TGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLEL 266 + L + + + E + I LL L Sbjct: 543 SDRE--ELSRVSDVLVKMP--EVDELLSPIVYVVP----LQLLAYHLAVLRGND 588 >UniRef50_UPI000196AB3E hypothetical protein CATMIT_01164 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196AB3E Length = 242 Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 89/254 (35%), Gaps = 21/254 (8%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 + L+ + + +Y++ H+ L+ + VS S + + A+KLGYKGF K Sbjct: 5 DQMNQLSDLELDIYNYIISHRHEVIHMKLIDLSTDLHVSSSMITRVAKKLGYKGFLEWKA 64 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 + +P ++ + N ++ +H+ + Sbjct: 65 EMKLDQEDKPIQN------------------KRALNYILDYFNRVDNKEFDDLIHQTAEI 106 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + ++ +I +GIG S +A+ A + G D + +D L + Sbjct: 107 IVNSHEVICSGIGLSDAIAKFAASLFNRKGKRTMYSGDFSSRF--RGMYDQNDCALFFTV 164 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS-ASISACHA 247 +G RE+ ++ + K++ IT + + + L + S + Sbjct: 165 SGETREIIDRIKDLKKYDIKIIVITNSASSTAAKMSDLALTYYMPSTKNSDFYSSATQVP 224 Query: 248 QGMLTDLLFIALIQ 261 + + + I+ Sbjct: 225 VLYIIESIANLFIE 238 >UniRef50_O26273 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=5 Tax=Euryarchaeota RepID=GLMS_METTH Length = 590 Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats. Identities = 40/256 (15%), Positives = 76/256 (29%), Gaps = 26/256 (10%) Query: 25 LLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVP 84 +L +L ++ + G L++ E + E S+ Sbjct: 198 ILNHTSRVIYLDDGEM-----------------VILDG--DLRVTDMEGNTVEKEVHSID 238 Query: 85 IHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASG 144 + K I E +A+ TL ++ V + RI G S Sbjct: 239 WSADMAEKGGYDHFMLKEIHEEPSAVRDTLTEWD--EVLGVVEEIGEVERICFVACGTSY 296 Query: 145 LVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLR 204 + + + V + A + L + IS +G + A Sbjct: 297 HASLVGKYLFESLLGIPTDVILASEFRYSAGALNDRTLAIFISQSGETADTLNALRAANS 356 Query: 205 VGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDL 264 K LAI ++ + A H LYT A A+ +Q + +L A+ Sbjct: 357 R-AKTLAIVNVLGSSATREAQHVLYTRA-GPEIGVAATKTYVSQLTVIYMLVAAMGA--- 411 Query: 265 ELAPERIRHSEALVKK 280 +R+ +++ Sbjct: 412 PELMDRLERVPEFMER 427 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 34/261 (13%), Positives = 76/261 (29%), Gaps = 29/261 (11%) Query: 17 SDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALAS 76 +D+ LA ++ +TA L+ A A S++ + LG + L Sbjct: 330 NDRTLAIFISQSGETADTLN----ALRAANSRAKTLAIVNVLGSSATREAQHVLYTRAGP 385 Query: 77 Q-------PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTML 129 + + + + + ++ ++ M L E+ + E Sbjct: 386 EIGVAATKTYVSQLTVIYMLVAAMGAPELMDR-LERVPEFMERALE--DEDGIKELAATC 442 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA-----SSPDDLLL 184 G G + A A KL + ++ ++ Sbjct: 443 SDVSDFFFIGRGFAYPTALEGALKL----KEITYIHGEGYAAGELKHGPLALIDNGVPVV 498 Query: 185 AISYTGVRRE-LNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 AIS G + +E+ G +V+ + + +L++ A + E + + Sbjct: 499 AISPPGPCHDKTLSNVEEVRARGARVIGVGSISDESLRKEADDFIGLD-PEVDDVISPLV 557 Query: 244 ACHAQGMLTDLLFIALIQQDL 264 LL + + Sbjct: 558 YIVP----LQLLSYHVSVERG 574 >UniRef50_Q0FJM2 Putative uncharacterized protein n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FJM2_9RHOB Length = 274 Score = 117 bits (293), Expect = 5e-25, Method: Composition-based stats. Identities = 55/280 (19%), Positives = 109/280 (38%), Gaps = 11/280 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L R+R + L +++ KL +LL P +Q+LA GVS+++V +F ++LG++ Sbjct: 2 FLARVRAQLPDLHRAEYKLGCFLLEFPGDLASYDAQELARLCGVSKATVSRFVRRLGFEN 61 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + A A + + + I + R + E + ++ + T + L Sbjct: 62 Y----DAARRAARDERQQCNGQISVRPRLRTGTTEISETV-RDEIDNLIWTYQQVDTDDL 116 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQASSPDD 181 + S+RR+ L G + A +L+++ A++ +L V +PDD Sbjct: 117 ESLADAVVSSRRVWLVGFRLCRVFADYLQTQLVQVAPTCASIPQPGVSLGEYVTEIAPDD 176 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++ ++ DE+ R G +A+ G L E Sbjct: 177 LVICMALGRREGRTEALLDELRRSGVP-IALIGDEEAGLAAGVRWQFRCRTETSEAQE-- 233 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + A L + Q+ +A R+R + + +L Sbjct: 234 --SHAAVLSLCSQIGARATQRAGAIARSRLRRIDEVNARL 271 >UniRef50_D1U3G0 KpsF/GutQ family protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U3G0_9DELT Length = 343 Score = 117 bits (293), Expect = 5e-25, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 69/167 (41%), Gaps = 2/167 (1%) Query: 97 LVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMK 156 + +++ + + + M R+++TGIG SGLV + A L Sbjct: 12 ELAREVLDIEIEGLRTVSGQLGDGFVRALTLMAECRGRVVITGIGKSGLVGRKIAATLSS 71 Query: 157 IGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT 216 G A + + + +D++LA+S +G E+N + +G V+A+TG T Sbjct: 72 TGTPAFFLHPVEGAHGDMGMIRSEDVVLALSNSGGSDEVNAIIPTLRSLGATVIAMTGNT 131 Query: 217 PNALQQRASHCL--YTIAEEQATNSASISACHAQGMLTDLLFIALIQ 261 +A+ + A + E A S+ A + D L + L++ Sbjct: 132 ASAMAELADITIEVRVPREACPMGLAPTSSTTAHLAVGDALAVCLME 178 >UniRef50_B4RJ65 KpsF n=58 Tax=Bacteria RepID=B4RJ65_NEIG2 Length = 326 Score = 117 bits (293), Expect = 5e-25, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 64/177 (36%), Gaps = 2/177 (1%) Query: 89 IRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQ 148 + ++ +++ + E + +L R+++TG+G SG + + Sbjct: 3 MAENEKYLDWAREVLHTEAEGLREIAAELDENFVLAADALLHCKGRVVITGMGKSGHIGR 62 Query: 149 NFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGK 208 A + G A V A + +D++ AIS +G E+ + R Sbjct: 63 KMAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVAAISNSGESDEITAIIPALKRKDIT 122 Query: 209 VLAITGFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQD 263 ++ IT + + + A + E A ++ A L D L + L++ Sbjct: 123 LVCITARPDSTMARHADIHITASVSQEACPLGLAPTTSTTAVMALGDALAVVLLRAR 179 >UniRef50_C9A1P4 Transcriptional regulator n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A1P4_ENTGA Length = 254 Score = 116 bits (292), Expect = 5e-25, Method: Composition-based stats. Identities = 48/273 (17%), Positives = 103/273 (37%), Gaps = 23/273 (8%) Query: 1 MNG--LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 M+ + + + L ++D + Y+ A + LA + S+SS+ +FAQK+ Sbjct: 1 MSIKTEELVSKYFFDLNENDLAIWKYISNNKKEASESTLVNLAKKCNYSKSSIHRFAQKI 60 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 YKGF LK AL L + LI + + + ++N Sbjct: 61 SYKGFSELKYALKAEL-------------------EAEDLEGNLIDQYVSIIANSMNEMK 101 Query: 119 EEKLHECVTMLRSARRIILTGIGA-SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 +++S++++ + G G VAQ + + V + + + Sbjct: 102 YRDFSTIFQLIQSSKKVFIYGTGTLQRAVAQEMRRVFLAGDEHFYVVEGVDEIGSLTDTL 161 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 + +DL+ IS G + A ++ G + IT F+ N + ++ ++ E+ Sbjct: 162 TTEDLVFIISLRGRSDNAHSFAKDLKVKGVPFVVITSFSENQIAHFSNENIFVNLEQVPI 221 Query: 238 NSASISACH-AQGMLTDLLFIALIQQDLELAPE 269 + + +L +LF+ ++ + Sbjct: 222 GNWKKYSVLDPYFILVSILFLRYMEYKQKKLSN 254 >UniRef50_Q03C42 Transcriptional regulator n=1 Tax=Lactobacillus casei ATCC 334 RepID=Q03C42_LACC3 Length = 270 Score = 116 bits (292), Expect = 6e-25, Method: Composition-based stats. Identities = 49/267 (18%), Positives = 99/267 (37%), Gaps = 20/267 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I Q+Y L Q++K++ +++ D R S ++A ++ S+S++ + +K+G Sbjct: 1 MKLESLINQKYSNLNQTEKEILAFIIENRDFVRKASLSEVAEKSLFSKSAIFRCCKKIGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF L+ L++ S+ +S + + +M T+N Sbjct: 61 TGFSQLRYVLTDEKDSEQDSLISV----------------DYLAQTVKSMLWTVNQFKST 104 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWK-LMKIGFNAAAV-RDMHALLATVQASS 178 + L +A I + G + + L IG A + + Sbjct: 105 NADDIYATLAAAGTIYIYSTGWQQQIMAQQLQRDLYLIGKFAFVFPTGHDEMQLSSTKIK 164 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P D ++ ISY G+ + + + G ++++ T F N L Q A+ LY + Sbjct: 165 PGDAVIVISYKGMNATIVQLVNNLKLNGVRIVSFTSFRQNRLAQAANFNLYYDIINKTVG 224 Query: 239 SASISACH--AQGMLTDLLFIALIQQD 263 + +L D+ + Sbjct: 225 IERKTERFFANLTLLIDIFSMGFANYL 251 >UniRef50_C6VU42 KpsF/GutQ family protein n=3 Tax=Sphingobacteriales RepID=C6VU42_DYAFD Length = 324 Score = 116 bits (292), Expect = 6e-25, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 78/184 (42%), Gaps = 2/184 (1%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWK 153 ++ + ++++++ A+ + + +E +L S R++++G+G S +V Q Sbjct: 6 NIQSIAKEVLRQEAEAVRDLIELIDDEFEKCVYAILHSGGRVVISGVGKSAIVGQKIVAT 65 Query: 154 LMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 L G A + A+ + +D+++ IS +G E+ + + R G K++A+ Sbjct: 66 LNSTGTPALFMHAADAIHGDLGMIQDNDVVIVISKSGDTPEIKVLVPLLKRTGVKMIAMV 125 Query: 214 GFTPNALQQRASHCL--YTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERI 271 + L + L + AE N A ++ L D L I L++ + Sbjct: 126 SNKDSYLAKNCILTLHAHAPAEADPLNLAPTTSTSVTMALGDALAICLLEARGFTHDDFA 185 Query: 272 RHSE 275 R+ Sbjct: 186 RYHP 189 >UniRef50_C2DZ33 Transcriptional regulator n=9 Tax=Lactobacillus jensenii RepID=C2DZ33_9LACO Length = 262 Score = 116 bits (292), Expect = 6e-25, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 98/268 (36%), Gaps = 26/268 (9%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN RI ++ L+ S+K++ LL LS + L+ + VS+S++ + +KLG Sbjct: 6 MNLQTRIYEKQGDLSGSEKEIIQGLLSSAKENSQLSLKDLSKKLYVSESAIFRLCKKLGL 65 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ LK LS + + +KE T+ Sbjct: 66 SGYSELKFELSAVSSIKNHPN------------------NNFVKEMADLTTNTIKQFEAR 107 Query: 121 KLHECVTMLRSARRIILTGIGASG-LVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASS 178 L +++A+ I L G L+A + +L G + L Q + Sbjct: 108 NLTNFYIDVQTAKTIYLYSTGWQQELLASYISKELFLFGKQTVLLPSALDELKMRGQFFN 167 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVG--GKVLAITGFTPNALQQRASHCLYTIAEEQA 236 D+L ISY+G + ++ VG K++++T N L + + + + + Sbjct: 168 KGDMLWTISYSGNNSSIVNELKKISLVGDKIKLVSLTKMGSNDLATISDYSFFFQTIDFS 227 Query: 237 T----NSASISACHAQGMLTDLLFIALI 260 + S +L DLL Sbjct: 228 YKNNGGGSPRSCFSPAYILIDLLMNGYF 255 >UniRef50_C7TGE4 Transcriptional regulator, RpiR family n=4 Tax=Lactobacillus RepID=C7TGE4_LACRL Length = 270 Score = 116 bits (292), Expect = 7e-25, Method: Composition-based stats. Identities = 56/286 (19%), Positives = 105/286 (36%), Gaps = 25/286 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M I Q+Y L QSDK++ +++ + R+ S ++A ++ S+S++ + QK+G Sbjct: 1 MQLESLINQKYTSLNQSDKEILTFIVKNREFVRNSSLSEVAAKSLFSKSAIFRCCQKIGL 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF L+ L+E D L V + + +M T+N Sbjct: 61 TGFSQLRYVLAEEQE--------------SDQDSLSNV--DYLAQTVKSMLWTVNQFKST 104 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWK-LMKIGFNAAAV-RDMHALLATVQASS 178 + L +A I + G + + L IG A + + Sbjct: 105 NVEGIYATLENAGTIYIYSTGWQQQIMAQQLQRDLYLIGKFAFLFPTGHDEMQLSSTKIK 164 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P D+++ ISY G+ + + + G ++++ T F N L Q A++ LY + Sbjct: 165 PGDVVIVISYKGMNATIVQLVNNLKLNGVQIVSFTSFRQNRLAQAANYNLYYDVINKTIG 224 Query: 239 ----SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 +L D+ + ER R ++ Sbjct: 225 ADKKVERF--FANLTLLIDIFSMGFANYLAAQ-EERTREHGEYNQR 267 >UniRef50_A6TPC3 Transcriptional regulator, RpiR family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TPC3_ALKMQ Length = 284 Score = 116 bits (292), Expect = 7e-25, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 107/285 (37%), Gaps = 12/285 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N RI + L + LA Y++ A LSS +L + S ++V++F+ LGYK Sbjct: 4 NFFQRIHASKENLTKKQMNLAQYIVHNYKKAIFLSSSELGRKINASDATVIRFSHALGYK 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF + AL S S + + ++ + A + E Sbjct: 64 GFSEMINALRSEFDGTISSVSRIELLHSPAEYQTHVDFNQIRECYAQA-------ITNEY 116 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA-SSPD 180 + V L + + I+ G ++ +A+ + L++ G ++ ++D + + + + Sbjct: 117 FEDLVENLLDSSKCIILGSESTASLAEYLNYHLIRYGISSDIIKDNSESIYKIYNEADEE 176 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +++++S + + ++ KV +IT + + C+ + Sbjct: 177 TVVISLSVRRYTKFQYYITERLIEKNMKVYSITDSIHSPYNSLNNKCIVLNS-STEEGFN 235 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPE---RIRHSEALVKKLV 282 +S +L +++ ++ + + + + V + Sbjct: 236 HLSHSVLMLVLQEIIRKGIVNRSKDEIAKCFSLLEKYNEDVDVFL 280 >UniRef50_C5D0V0 Transcriptional regulator, RpiR family n=1 Tax=Variovorax paradoxus S110 RepID=C5D0V0_VARPS Length = 288 Score = 116 bits (291), Expect = 7e-25, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 99/282 (35%), Gaps = 6/282 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + RI + +S++ LA YL ++ +A ++GVS +V +F + LGY Sbjct: 6 SLFERIEAASSEMTRSERLLAAYLTANARELTLENAASVARKSGVSPMTVGRFLRTLGYD 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F ++ S A + R P+ + + A+ A ++ + E Sbjct: 66 SFDEVRRETSRLSAPAELRIAGRFEQFSRSQGPVSDARSAQLTQQIDALVAAHDLATGEH 125 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR--DMHALLATVQASSP 179 + V + +++R+ + G VA +FA +L + + D S Sbjct: 126 WNAMVRQVATSQRVFVAGYQTVRGVASDFAARLEYVREGVKFLDGADGTYAELLGALKSQ 185 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 L+ + ++ A G V IT + + H + + Sbjct: 186 TRCLVLVDIRRYAKQAEALASAATEAGIPVFVITDAYCHWARTYTPHVFHVQTDVGFFWD 245 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + A +LL +I+Q + ER+ E L + Sbjct: 246 ----STVAIVGFINLLMNGVIEQLGKKVGERVSRLEKLQDRF 283 >UniRef50_B8CZC0 KpsF/GutQ family protein n=4 Tax=Bacteria RepID=B8CZC0_HALOH Length = 331 Score = 116 bits (291), Expect = 7e-25, Method: Composition-based stats. Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 2/174 (1%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG 158 K+++ ++ + E +L S R+I TGIG SGL+ Q A G Sbjct: 19 ARKVLEIEAYSVLKLKDSIGSEFADIVRVILESKGRVIFTGIGKSGLIGQKLAATFSSTG 78 Query: 159 FNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPN 218 A V AL + + DD+++AIS +G E+ + R+G ++A+TG + Sbjct: 79 TPAFFVHAGEALHGDLGMVTGDDIIIAISNSGETEEVLSLVPSIRRIGAFLIAVTGNRSS 138 Query: 219 ALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQDLELAPER 270 L + A++ L EE+ A ++ A L D L IAL + + Sbjct: 139 TLARYANNHLLVNIEEEACPHGLAPTASTTATLALGDALAIALSKLKGFTPEDF 192 >UniRef50_C8P353 Putative uncharacterized protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P353_ERYRH Length = 256 Score = 116 bits (291), Expect = 7e-25, Method: Composition-based stats. Identities = 52/277 (18%), Positives = 99/277 (35%), Gaps = 24/277 (8%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARH--LSSQQLANEAGVSQSSVVKFAQKL 58 M+ +I L +K+L LL ++ + + + +A+ VS++SV +F +KL Sbjct: 1 MSLQKQISIHIHSLTFMEKELLRNLLDNFESFEYRYFTIENIADRFNVSKTSVHRFTKKL 60 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 GY F K + I + T + + Sbjct: 61 GYDSFTYFKDDFFGRVVQDEVFAYTRIP-------------------YVDMLTHTYELAT 101 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS- 177 + + V + +++RI + G+G S + + F KL G A D + + +A Sbjct: 102 KTITDDIVKKMINSKRITIYGMGMSNFLGKMFQIKLQLYGKTAEQYDDSRFMRLSARALV 161 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 +D+L +S +G E+ A E ++ IT + + A+H + T + Sbjct: 162 PKEDVLFVLSRSGRPPEIVEAVVEANLRKIDIILITEVPDSPIGMMATHIIQTSQSKDLD 221 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 N I + DLL I+ + Sbjct: 222 N--DIDTRLNAHIAMDLLMARFIEFREKEEVSNEEKY 256 >UniRef50_Q1QYR8 Transcriptional regulator, RpiR family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QYR8_CHRSD Length = 305 Score = 116 bits (291), Expect = 7e-25, Method: Composition-based stats. Identities = 56/275 (20%), Positives = 99/275 (36%), Gaps = 10/275 (3%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L+ L + LL QP+ S QLA GV S + + + LG +GF AL+ + Sbjct: 32 KLSAKGVALLEALLAQPEAVSLSSISQLAQRHGVHPSRLTRLSHALGLEGFKALQTLFRD 91 Query: 73 ALASQPESP---SVPIHNQIRGDDPLRLVGEK--LIKENTAAMYATLNVNSEEKLHECVT 127 L+ + + + L ++ + A + +L Sbjct: 92 DLSDSAFYSTRAQRLLEFGETPRAEGAELADDRMLWQQEMQNLSAAVEALDTAQLARAAV 151 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASSPDDLLLAI 186 ++ ARR+ + G+ AS A A+ L + V + DDL++ I Sbjct: 152 AIQRARRVHVVGLRASFGAAHYLAYYLDYLRDGVQLVSPQAGVSVEQALRLGEDDLVIGI 211 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 ++ R + G +LA+T + + L L AE + Sbjct: 212 AFRPESRMSVDYCRLAVEQGASLLALTNHSASQLAALTELTLLAPAEGAFF----FNPMS 267 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + ML +LL + + A +R EAL+ +L Sbjct: 268 SLFMLVELLLSRVARDMGHDAVLALRQREALISRL 302 >UniRef50_A8U5R1 RpiR-family transcriptional regulator n=2 Tax=Bacilli RepID=A8U5R1_9LACT Length = 256 Score = 116 bits (291), Expect = 8e-25, Method: Composition-based stats. Identities = 40/271 (14%), Positives = 89/271 (32%), Gaps = 18/271 (6%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + ++ Q L++ D K+ Y++ D + +A + S S++++ ++KLGY Sbjct: 1 MKDISKLIQGK-KLSELDIKVLHYIIENIDDVLDKGVRGVAKDNYTSPSTIIRLSKKLGY 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF L L + + D I + + Sbjct: 60 TGFIDLYYQL----------LPMVKRTVGQQTDNDEDFLR--ISQQDFFKENSREDID-- 105 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + V L+ + I + G S ++A+ KL+ +G ++ Sbjct: 106 QFIRQVLYLKQ-KYIFIYATGFSAIMAEYLYKKLLVLGKKTVIATGTDSIGVFENNLEDI 164 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 + IS +G +++ G + T T N + A + + Sbjct: 165 GAFIVISKSGETQQVIDKLLVAKDQGIFTITFTKETSNRAAELADLNFKLTDNNKLDDRN 224 Query: 241 SI-SACHA-QGMLTDLLFIALIQQDLELAPE 269 + ++ ML + +F + + + Sbjct: 225 MLPNSFFPRLLMLVEYIFKMYLDGLQKEIAD 255 >UniRef50_A1FB39 Transcriptional regulator (Fragment) n=1 Tax=Vibrio cholerae 2740-80 RepID=A1FB39_VIBCH Length = 170 Score = 116 bits (291), Expect = 8e-25, Method: Composition-based stats. Identities = 39/176 (22%), Positives = 77/176 (43%), Gaps = 9/176 (5%) Query: 6 RIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 R+R + L++ + +ADY+L ++ + LA S+++VV+ + LGYKG+ Sbjct: 3 RLRSNTEPLSKKLRVVADYVLENAHEVQYQTITDLAFNTKTSEATVVRLCRDLGYKGYSD 62 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 ++AL+ L+ + + E + ++ T + L+ Sbjct: 63 FRMALAVDLSQSANQSQPKMDG---------DICEVSAQSAVDSLMDTAKLIDRAALNRI 113 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 ++ A+ I G+GAS +V + A++L++IG A D H + S D Sbjct: 114 CELVHGAKFIGCVGVGASSIVGRYLAYRLVRIGKKAIMYEDTHLAAMSAGQSVVGD 169 >UniRef50_C1IAG1 Predicted protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IAG1_9CLOT Length = 267 Score = 116 bits (291), Expect = 9e-25, Method: Composition-based stats. Identities = 40/267 (14%), Positives = 89/267 (33%), Gaps = 6/267 (2%) Query: 2 NGLLRIRQRYQGLAQSD--KKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 + + R+ ++D +A +L + ++S +LA+ S +++ +F KLG Sbjct: 3 DLIYRLLLFLNSSKENDINYNIAITMLRNIRSIPNMSISKLADLCFTSPAAITRFCHKLG 62 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 Y F K + + + P P + + E + + Sbjct: 63 YSNFIEFKENIKINIGHYTKGLMKPKAMHYDL--PREDILNNMSLEIINEIETFKSFIDL 120 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + + V ++ ++ + + G S L+AQ KL+ I D+ Sbjct: 121 KVIDRVVELIFNSNNVCIFGTQFSQLMAQELQRKLVNISKLIYHANDVQEQERLADELDE 180 Query: 180 DDLLLAISYTGV-RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 + L + IS TG ++ + V+ IT +R+ + +Y + Sbjct: 181 NSLAILISPTGRFTLYHERLWRKIEKSSATVVVITEQHKPEYMKRSDYIIYLPPRNDSNE 240 Query: 239 SASISACHAQGMLTDLLFIALIQQDLE 265 + L + ++I Sbjct: 241 YVQNH-RYDLSYLLEYIYIRYGSMYKN 266 >UniRef50_C6DIN8 KpsF/GutQ family protein n=10 Tax=Enterobacteriaceae RepID=C6DIN8_PECCP Length = 363 Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 75/201 (37%), Gaps = 2/201 (0%) Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 +A + + +++ D + G+++I + + C + Sbjct: 24 QADHAPQADHTRQKSHELPADFDFQQAGKQVISIERDGLAQLDQYIDDNFTLACKKIFDC 83 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGV 191 ++++ G+G SG + A G A V A + +P D+++AIS +G Sbjct: 84 QGKVVVMGMGKSGHIGCKMAATFASTGTPAFFVHPGEASHGDLGMVTPHDIVIAISNSGE 143 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL--YTIAEEQATNSASISACHAQG 249 E+ + R ++ +T + + + A L + E A S+ A Sbjct: 144 SHEILSLIPVLKRQKVFLICMTSAPESTMGKAADIHLCVHVPQEACPLGLAPTSSTTATL 203 Query: 250 MLTDLLFIALIQQDLELAPER 270 ++ D L +AL+Q A + Sbjct: 204 VMGDALAVALLQARGFTAEDF 224 >UniRef50_C6JMB7 Polysialic acid capsule expression protein kpsF n=2 Tax=Fusobacterium RepID=C6JMB7_FUSVA Length = 324 Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 81/177 (45%), Gaps = 2/177 (1%) Query: 89 IRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQ 148 + + + +++ + + + E + +L+S ++++TGIG SGL+ + Sbjct: 1 MTKEMDIINYAKEVFDSEIEELKIVRDKINREIIEVVEEILKSEGKVVVTGIGKSGLIGK 60 Query: 149 NFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGK 208 A L G ++ + L + S +D+++AIS +G E+ + ++G K Sbjct: 61 KIAATLASTGTHSVFMNSAEGLHGDLGMISKEDVVIAISNSGNSDEIVAILPSIKKIGAK 120 Query: 209 VLAITGFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQD 263 ++A+TG + L + A + L E N A +S+ + ++ D L LI++ Sbjct: 121 IVAMTGNRNSKLGREADYILNIGVKREGCPLNLAPMSSTTSTLVMGDALAAILIKKR 177 >UniRef50_A5LQQ9 Phosphosugar-binding transcriptional regulator, RpiR family protein n=3 Tax=Streptococcus pneumoniae RepID=A5LQQ9_STRPN Length = 203 Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats. Identities = 38/200 (19%), Positives = 84/200 (42%) Query: 81 PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGI 140 + I +++ + + +T + ++ + ++R A +I++ G+ Sbjct: 1 MTKDILELESQKMSSDTFIDEIKNNYLSIVESTRKLIDGRQIELAIKLIREANQILMIGV 60 Query: 141 GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAAD 200 G+SG A+ F L++IG + V D H L +DL++A S +G +E+ Sbjct: 61 GSSGNAAREFESSLLRIGIISKTVIDTHFQLMHTALLKDNDLIIAFSLSGSTKEVEETLL 120 Query: 201 EMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALI 260 R K+++IT ++ + + + L T +E S+ A +Q + D++ L Sbjct: 121 NAKRKNVKIISITNYSSRNIAKLSDCVLLTSKKESYLEGGSLMAKASQLFIIDVICTRLS 180 Query: 261 QQDLELAPERIRHSEALVKK 280 + E + +L+ Sbjct: 181 LINYEDTICKKEEIASLLSN 200 >UniRef50_A6VSF8 Transcriptional regulator, RpiR family n=4 Tax=Gammaproteobacteria RepID=A6VSF8_MARMS Length = 272 Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats. Identities = 49/281 (17%), Positives = 100/281 (35%), Gaps = 20/281 (7%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L I Q Y L+ S + +A+YL P +S ++A S+++V +F ++LGY Sbjct: 6 DVLSLIEQTYPTLSPSARSIANYLQQNPLAIVSQTSAEIAENTNTSKATVSRFFRQLGYD 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 + + L ++L + T E Sbjct: 66 S--------QQGAKQAQLALRESGVPIFIQGSSLDQTAQELKNLSL-----TFEGLRPEN 112 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQASSPD 180 L++ L A R+ L G + +A +F +L ++ + + L + D Sbjct: 113 LNDISERLAKASRVTLIGFRNAYPLALHFRQQLQQVRHSVRLLPQPGQTLGEDLHDILDD 172 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 ++++ + + R+ + + G + IT T Q+ SH L ++ Sbjct: 173 EVIVLLGFRRRTRQFKKIVEALE--GRTTVLITDPTGQVYNQQVSHVLVCHLGNES---- 226 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + A L +L + + A + + AL + L Sbjct: 227 PFDSYAAPMSLISMLCNRVFGFLGDAASRQTQAISALYEDL 267 >UniRef50_A8IDV1 Transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IDV1_AZOC5 Length = 327 Score = 115 bits (289), Expect = 1e-24, Method: Composition-based stats. Identities = 47/265 (17%), Positives = 93/265 (35%), Gaps = 9/265 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + +R G+ ++AD++L P A + + LA A VS +++ +F + LG + Sbjct: 33 SLVDLVRAHRAGMTPLHGRVADFVLRHPLQAATMGIEDLAAAAEVSVATINRFVRGLGLE 92 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF + + + G D + + A + A V + Sbjct: 93 GFSQFRALAVASFRPLSPVEKLEAQAAASGRDTDH--VQASLDSGLANLRAARAVADADV 150 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR---DMHALLATVQASS 178 + + SA R++L G G S + A L+ + ++ Sbjct: 151 FRQAAEAVSSADRVVLLGFGLSAPLVGLLADMLIPFCRAQMILDGQGGQERMIRRAFNVR 210 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D+++A++ A M G +++ IT + L A L AE + Sbjct: 211 AGDVVIALALPRYSLSTIELARGMRSQGARIIGITDSLSSPLALEADLLLLGPAEHPLLH 270 Query: 239 SASISACHAQGMLTDLLFIALIQQD 263 ++ A L + L L + Sbjct: 271 ----ASATALVALFEALVALLTARR 291 >UniRef50_Q47334 Polysialic acid capsule expression protein kpsF n=23 Tax=Escherichia RepID=KPSF5_ECOLX Length = 327 Score = 115 bits (289), Expect = 1e-24, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 68/169 (40%), Gaps = 3/169 (1%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILT-GIGASGLVAQNFAWKLMKI 157 + + E +AA+ + + ++ + + ++ G+G SG V + + L Sbjct: 22 VRQTLAEQSAALQNLSKQLDSGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKMSATLAST 81 Query: 158 GFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTP 217 G + + A + +P DLL+ IS +G E+ + G +++AIT Sbjct: 82 GTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRIIAITNNGN 141 Query: 218 NALQQRASHC--LYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDL 264 + L + A L+ E N A ++ + D L IA+I Q Sbjct: 142 STLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIHQRK 190 >UniRef50_A3PQG1 Transcriptional regulator, RpiR family n=6 Tax=Rhodobacteraceae RepID=A3PQG1_RHOS1 Length = 286 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 49/276 (17%), Positives = 107/276 (38%), Gaps = 11/276 (3%) Query: 1 MNGLLRIRQRYQGLAQSDKKLAD----YLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQ 56 M IR+ +A D + +LL S++ LA AG + ++V + A+ Sbjct: 1 MQQETEIREALARVAAGDAPILRGFAVWLLDNLSAVAFNSTRSLAALAGTNPNTVTRLAR 60 Query: 57 KLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNV 116 ++G+ G+ + + A+ E + + + + + N + + Sbjct: 61 EIGFDGYDSFRSAVQEVVQRRNIRYGERAEALRHR--SEADIWGEALTANLGNIETLFSA 118 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMK-IGFNAAAVRDMHALLATVQ 175 + L CV L +ARR+ G+ + +A F++ + A+L V Sbjct: 119 EGMDLLESCVEPLLAARRVHTIGVRSCFGLAHYFSYVGGRAFANFIEVPVTPGAILDQVA 178 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 +++P+D+++AI+Y E+ A G ++LA+T + + A + Sbjct: 179 SATPEDIVVAITYEHYSAEVVRACHVARSCGARILALTDSHSAPVAEGAWKVVRLPMAGP 238 Query: 236 ATNSASISACHAQGMLTDLLFIALIQQDLELAPERI 271 + + A + +LL A+ + + A + Sbjct: 239 QI----LPSLTAAYIALELLLSAMAARSPDAAARLL 270 >UniRef50_C1TKE5 KpsF/GutQ family protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TKE5_9BACT Length = 335 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 36/188 (19%), Positives = 70/188 (37%), Gaps = 2/188 (1%) Query: 78 PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIIL 137 S + D+ L +G +++ E + + E + R+++ Sbjct: 1 MMSLPSERDCPVFDDEKLVEIGRQVLLEEAEEIKKAASRMGPELAKAARIVQGCRGRLVI 60 Query: 138 TGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNL 197 +G+G SG + + A L +G + + A + +D+ IS++G E+ Sbjct: 61 SGLGKSGHIGRKIAATLASLGTPSFFLHAAEAAHGDLGMVRREDVAFLISHSGTTSEVVK 120 Query: 198 AADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLL 255 R+G V+A+TG + L + A L E N A S+ Q + D L Sbjct: 121 LIPFFRRLGAPVIALTGSLESPLAKGADVILNASVEREADPLNLAPTSSTTVQLAIGDAL 180 Query: 256 FIALIQQD 263 + + Sbjct: 181 AGVVTEMR 188 >UniRef50_Q8D1Q8 Arabinose 5-phosphate isomerase n=525 Tax=cellular organisms RepID=KDSD_YERPE Length = 328 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 70/179 (39%), Gaps = 2/179 (1%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWK 153 + G+++++ + +E+ C + R ++++ G+G SG + A Sbjct: 11 DFQQAGKQVLQIEREGLAQLDQYINEDFSRACEAIFRCHGKVVVMGMGKSGHIGCKIAAT 70 Query: 154 LMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 G A V A + +P D++LAIS +G E+ + R ++ ++ Sbjct: 71 FASTGTPAFFVHPGEASHGDLGMITPQDIVLAISNSGESNEILTLIPVLKRQKILLICMS 130 Query: 214 GFTPNALQQRASH--CLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPER 270 + + + A C+ E A ++ A ++ D L +AL++ + Sbjct: 131 SNPESTMGKAADIHLCINVPQEACPLGLAPTTSTTATLVMGDALAVALLKARGFTQEDF 189 >UniRef50_B0SHW1 Sugar phosphate isomerase n=6 Tax=Leptospira RepID=B0SHW1_LEPBA Length = 324 Score = 115 bits (287), Expect = 2e-24, Method: Composition-based stats. Identities = 37/175 (21%), Positives = 77/175 (44%), Gaps = 2/175 (1%) Query: 98 VGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKI 157 + ++ + + +++ + +L S ++I+TG+G SG +A+ + L Sbjct: 9 IIKQALDDEISSLVYFRENLDPSVKNCIDLILNSKGKVIVTGVGKSGDIAKKISHTLSST 68 Query: 158 GFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTP 217 G +A + A PDD++LAI +G ELN + ++G K++ IT + Sbjct: 69 GTSAYFLHPTDASHGDSGIVGPDDVVLAIGKSGESEELNYILPTLRKIGAKIVGITANSK 128 Query: 218 NALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDLELAPER 270 + L + + + T E + A S+ +L D + +AL++ A + Sbjct: 129 SKLAELSDVVIITPVLKEACPLDLAPTSSTTIALVLGDAIAVALMELKEFKADDF 183 >UniRef50_C5J6W4 Transcriptional regulator n=1 Tax=Mycoplasma conjunctivae HRC/581 RepID=C5J6W4_MYCCR Length = 278 Score = 115 bits (287), Expect = 2e-24, Method: Composition-based stats. Identities = 52/274 (18%), Positives = 109/274 (39%), Gaps = 9/274 (3%) Query: 8 RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALK 67 +++ + L +++++ D L P + S ++LA ++ VS S + +KLG+ Sbjct: 8 QKQIESLTTAERQIIDLSLKNPVFFYNASIKELAKKSNVSMSVISLLTKKLGFDS----- 62 Query: 68 LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 L + + + + ++L ++ T ++ + + Sbjct: 63 --LKNMQFYVYHHYLNSKNILLDSNSENSKILDQLHFYYRDSITKTAHLIDLNSISKISE 120 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAIS 187 + +A +I L G G+S L A A L K+G NA + D H+ L T + + ++ S Sbjct: 121 TISNANKIFLYGAGSSSLAASELAINLQKLGLNATSFFDFHSFLLTSGQ-NQESTIILFS 179 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHA 247 + +E+ ++ G ++ IT + Q + L EQ SIS+ Sbjct: 180 KSCKTKEIEFIIKQLGDKGENLIIITANKQ-VIHQEKNQVLIYQTLEQKQRFISISSKVN 238 Query: 248 QGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 Q ++DL+F L ++ + L+ Sbjct: 239 QYFVSDLIFFILANSMDIKYQQKYEQNYFLLNNW 272 >UniRef50_Q15U63 Transcriptional regulator, RpiR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15U63_PSEA6 Length = 272 Score = 115 bits (287), Expect = 2e-24, Method: Composition-based stats. Identities = 51/282 (18%), Positives = 105/282 (37%), Gaps = 24/282 (8%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + RI Q+YQGL+ + + +AD+L P S Q+A + S+++V +F ++LGY Sbjct: 6 FIERIEQQYQGLSPNARLIADHLQHTPLDVLSCSVAQIAEKTQTSKATVSRFFRQLGYDS 65 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 K L+ A+ + + T + + +L Sbjct: 66 HHDAKQELNTFRANGYPMYMESDQGGA-------------LNREIQRIEQTWSNLDQTQL 112 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH-ALLATVQASSPDD 181 + + + A RI L G S VA +F +L++I + L ++ S D+ Sbjct: 113 NGLIQSICQASRITLIGFRNSYPVALHFRQQLLQIRSKVRLLPQPGQTLSEELRDISEDE 172 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHC--LYTIAEEQATNS 239 L++ + + + D++ +A+ + A L Q Sbjct: 173 LVILVGFRRRPKIFKPLLDKIQHHN---VALLADPSGQI--YADQVKQLIICQLGQE--- 224 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++ + A + ++ + + A RI +L ++L Sbjct: 225 QALDSYAAPMSVISIICNQVFTLLDKTADRRISEISSLYEEL 266 >UniRef50_Q10ZT6 KpsF/GutQ family protein n=1 Tax=Trichodesmium erythraeum IMS101 RepID=Q10ZT6_TRIEI Length = 324 Score = 115 bits (287), Expect = 2e-24, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 68/181 (37%), Gaps = 2/181 (1%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWK 153 ++ + +I++ +A+ + L + + +++++GIG SG ++Q A Sbjct: 6 SIKQQLKSVIEQEISAISKLCESIDDSWLKAVLRLRDCKGKLVVSGIGKSGSISQKIAAS 65 Query: 154 LMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 G A + A + D+LL +S +G EL R+ ++ IT Sbjct: 66 FTSTGIPAIFIHPTEASHGDLGLLDSSDILLVLSASGQTSELLDIMQYASRLKSSIILIT 125 Query: 214 GFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERI 271 ++L A L E A + Q +L D L + L+ + + Sbjct: 126 KNPNSSLAHFADIILQIPDLPEACINGLAPTISTTCQLVLGDALVVTLMSLRGFTSEDFK 185 Query: 272 R 272 + Sbjct: 186 Q 186 >UniRef50_B6ARK4 Sugar isomerase, KpsF/GutQ family n=3 Tax=Bacteria RepID=B6ARK4_9BACT Length = 332 Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 70/167 (41%), Gaps = 2/167 (1%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG 158 +++ E + A+ A E +L+ + ++ +TG+G SG VA+ A L G Sbjct: 13 AREVLDEESRALSALSLSMDEAFSRAVAAILQGSGKVAVTGMGKSGHVARKIAATLSSTG 72 Query: 159 FNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPN 218 A + A+ + A D +LA+S +G +E+ + R+ ++++ + Sbjct: 73 TPAFFLHPGEAVHGDLGALDRGDTVLALSKSGETQEILDLLPLLKRIDIPLISMVCERES 132 Query: 219 ALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQD 263 L + + L E A ++ + L D L + L+++ Sbjct: 133 TLARLSEVTLLIPVTREAGPLGIAPTTSTTSMLALGDALAMVLLEER 179 >UniRef50_A4GJ53 Putative KpsF/GutQ n=1 Tax=uncultured marine Nitrospinaceae bacterium RepID=A4GJ53_9DELT Length = 338 Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 80/193 (41%), Gaps = 5/193 (2%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWK 153 + K++ + A+ N ++ ++ V L + +++TG+G SGL+ + + Sbjct: 21 SIIETARKVLDIESLAIAELGNRIDDQFVN-VVHHLNQCKHLVITGVGKSGLIGKKISST 79 Query: 154 LMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 IG + + A + S D ++AIS +G E+ R+ ++ +T Sbjct: 80 FSSIGLPSLFLHASEASHGDLGMISEGDTVIAISNSGETDEVVKLLPIFNRIKCTLVGMT 139 Query: 214 GFTPNALQQRASHCLYTI--AEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERI 271 G ++L +R+ + L E + + ++ A + D L +A ++ + Sbjct: 140 GNMQSSLAKRSDYVLDVSVKVEACSKDLVPTASTTATLAMGDALAMAFMELRGVQEEDFA 199 Query: 272 RHSE--ALVKKLV 282 + L +KL+ Sbjct: 200 LNHPGGNLGRKLL 212 >UniRef50_Q8R841 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=25 Tax=Bacteria RepID=GLMS_THETN Length = 608 Score = 114 bits (286), Expect = 3e-24, Method: Composition-based stats. Identities = 45/264 (17%), Positives = 81/264 (30%), Gaps = 26/264 (9%) Query: 25 LLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVP 84 +L L ++A S + F +K+G F V Sbjct: 196 ILKYTRNVYFLDDHEIAIIKKDSVEFIDVFGRKIGKSLF------------------EVK 237 Query: 85 IHNQIRGDDPLRLVGEKLIKENTAAMYATLN-------VNSEEKLHECVTMLRSARRIIL 137 + K I E AA+ TL + ++ L +I + Sbjct: 238 WDVEAAEKGGYEHFMIKEIHEQPAAIKDTLRGRIINDSQIVLDNINITKEDLEKIEKIFI 297 Query: 138 TGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNL 197 G + + + V + L + IS +G + Sbjct: 298 VACGTAYHAGVVGKYVIESFARIPVEVDVASEFRYRNPIVNERILTIVISQSGETADTIA 357 Query: 198 AADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFI 257 A E R G +V+AIT +++ + A LYT A AS A Q + L+ + Sbjct: 358 ALKEAKRKGSRVIAITNVVGSSVSREADEVLYTWA-GPEIAVASTKAYTTQLIALYLIAL 416 Query: 258 ALIQQDLELAPERIRHSEALVKKL 281 + ++ ++ + +KKL Sbjct: 417 DFALKKGTMSSTKVVEIISELKKL 440 >UniRef50_Q8KG38 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=46 Tax=Bacteria RepID=GLMS_CHLTE Length = 614 Score = 114 bits (286), Expect = 3e-24, Method: Composition-based stats. Identities = 41/263 (15%), Positives = 79/263 (30%), Gaps = 27/263 (10%) Query: 25 LLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVP 84 ++ + +LS ++A S + E + Q + Sbjct: 202 IVEHTNKVVYLSDGEMAVVTRDSYTVKT------------------IENVEQQKRVTELD 243 Query: 85 IHNQIRGDDPLRLVGEKLIKENTAAMYATLN--------VNSEEKLHECVTMLRSARRII 136 + K I E M + +H+ + L+ A+RI+ Sbjct: 244 FSLEKIEKGGFEHFMLKEIFEQPEVMRDVMRGRVRVEEGRVHLGGIHDYLDRLKQAKRIM 303 Query: 137 LTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELN 196 + G S + + + V S DD+++ IS +G + Sbjct: 304 ICACGTSWHAGLIGEYLIEEFARIPVEVDYASEFRYRNPIVSSDDVVIVISQSGETADTL 363 Query: 197 LAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLF 256 A G V+ I + + + +YT A AS A AQ ++ +L Sbjct: 364 AALRLAKEKGAMVMGICNVVGSTIPRETLCGMYTHA-GPEVGVASTKAFTAQVIVLFMLA 422 Query: 257 IALIQQDLELAPERIRHSEALVK 279 +AL + E + L + Sbjct: 423 MALSKGRTISQEEIKLNLRELAE 445 Score = 41.5 bits (96), Expect = 0.032, Method: Composition-based stats. Identities = 25/175 (14%), Positives = 53/175 (30%), Gaps = 12/175 (6%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWK 153 + L + + + + E L+ AR + G G + VA A K Sbjct: 432 SQEEIKLNLRELAEVPDKVAWILEQNDAIKEIAVKLKDARNALYLGRGYNFPVALEGALK 491 Query: 154 LMKIG-FNAAAVRDMHALLATVQASSPDDLLLAISYTGVR-RELNLAADEMLRVGGKVLA 211 L +I +A + D ++ I+ ++ +E+ G+V+A Sbjct: 492 LKEISYIHAEGYPAAEMKHGPIALIDEDMPVIVIATRDNTYAKILSNIEEVRSRKGRVIA 551 Query: 212 ITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLT--DLLFIALIQQDL 264 I +++ +Y + +A + LL + Sbjct: 552 IASEGDREIERLTEDVIYIP--------QASAAVLPLLTVIPLQLLSYHVATLRG 598 >UniRef50_D2BNU6 Transcriptional regulator, RpiR family n=4 Tax=Lactococcus lactis RepID=D2BNU6_LACLK Length = 243 Score = 114 bits (285), Expect = 4e-24, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 101/263 (38%), Gaps = 26/263 (9%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + +Q L +++ YL D ++ + +A EA V SSV++ K+GY Sbjct: 2 MSFFGNVD--FQKLTYTERTCYSYLRDNVDKIPYMRVRDIALEAHVGTSSVMRLIHKMGY 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + K + + + S + I + + + Sbjct: 60 DSYTDFKEYIIDKKELEKGSSNTAIPFSL-----------DIFSNDIEQR---------- 98 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L + + II TG+G+SGL+ A +L +G N + D+ +A+ ++ + Sbjct: 99 -LDNLAHRVIESDNIIFTGVGSSGLICDYAARRLAGVGINTFSFSDVTYPIASKLQNTTN 157 Query: 181 DLLLAISYTGVRRELNLAADEMLRVG-GKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 L++A+S +G E+ + + IT +++ + + L E N+ Sbjct: 158 TLVIALSISGETNEIIEVLTSLRSNKDVYISCITPKLNSSIAELSDFVLTYRINEHRINT 217 Query: 240 -ASISACHAQGMLTDLLFIALIQ 261 +++ LT+ L + Q Sbjct: 218 HYDLTSQLPTVYLTERLTDLVYQ 240 >UniRef50_A8LRZ7 Transcriptional regulator n=2 Tax=Rhodobacterales RepID=A8LRZ7_DINSH Length = 281 Score = 114 bits (285), Expect = 4e-24, Method: Composition-based stats. Identities = 41/280 (14%), Positives = 95/280 (33%), Gaps = 11/280 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L R+ L S++KLA+ +L P ++ ++A A VS ++V +F +++GY Sbjct: 9 FLARVSDALPDLHPSERKLAELVLDFPGEMAGYTATEIAELANVSNATVSRFVRRIGYGS 68 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F + A+ + + + G R + + + T + + Sbjct: 69 FDEARRAVRDEQQAGTALLRMSADTPQSGGAVARHLM-----ASQQNLELTYGGLDDTVI 123 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSPDD 181 + +A R+ G A AQ W+ ++ + L + + D Sbjct: 124 DYLAEAMIAAPRVWFVGFRAGQSFAQYLGWQCSQVLPLVTVLPRAGETLAESFASLDARD 183 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++ ++ + A+ + G + + L A L + A Sbjct: 184 VVFLVALRRKPKLTQAVAEATKQAGAALAVLADGPTPDLAG-ADWHLTSATSTT----AP 238 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + + +L+ +I+ R+ E ++ Sbjct: 239 LMNHVSSMAVCNLIGARIIELSGAAGRARMAAIEESHRRF 278 >UniRef50_UPI000196AA26 hypothetical protein CATMIT_01876 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196AA26 Length = 274 Score = 114 bits (285), Expect = 4e-24, Method: Composition-based stats. Identities = 36/276 (13%), Positives = 89/276 (32%), Gaps = 8/276 (2%) Query: 2 NGLLRIRQRYQGLAQSD--KKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 N R+ +++D +A ++ + +LA E VS +++ +F + LG Sbjct: 3 NLFYRLMIYLDTASETDTNYFIALFMANNFYRIPDMRISELAEECFVSPATISRFCRALG 62 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 Y+ F LK + ++ + ++ + E+ ++ + + Sbjct: 63 YENFAHLKQECNSFHSNNKKFNNLINIDLECMAHSPEKATEEFAQQIIESTKEISKILDW 122 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + L E + ++ + G S A L+ + A D L + + Sbjct: 123 KILDEVLHLIHDHEEVAFFGTQFSTSAAILLQTDLLMLEKFTIAYMDSERQLECAKQMTE 182 Query: 180 DDLLLAISYTGVRREL-NLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D + + IS G + + + + ++ IT + L + + + Sbjct: 183 DSVAIVISLNGNFEHVGHKVLQYLHKSKCHIVWITSTHEDNLGIPVEYKVLVGG-----S 237 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 + + HA L+ + + Sbjct: 238 LENKTTKHALLTAVQLMSLRYYSLFCPDLKSMKKKL 273 >UniRef50_Q3ATD5 KpsF/GutQ n=10 Tax=Chlorobiaceae RepID=Q3ATD5_CHLCH Length = 328 Score = 114 bits (285), Expect = 4e-24, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 76/183 (41%), Gaps = 2/183 (1%) Query: 84 PIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGAS 143 L +G +++++ A+ M+ ++I++G+G S Sbjct: 1 MNTTPQTETATLTGIGRQILEQEAQAIAHIAEHLDHHFAEAIQVMVACKGKVIVSGMGKS 60 Query: 144 GLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEML 203 G++AQ A + G A + A + + +D++L +S +G ELN + Sbjct: 61 GIIAQKIAATMASTGTTALFLHPADAAHGDLGVVAAEDVVLCLSKSGSTEELNFIIPPLR 120 Query: 204 RVGGKVLAITGFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQ 261 ++G K++ +TG + L Q A L T E + A ++ A + D L I L+Q Sbjct: 121 QLGAKIIVMTGNPRSFLAQNADITLNTGVAKEACPYDLAPTTSTTAMLAMGDALAITLMQ 180 Query: 262 QDL 264 Q Sbjct: 181 QKK 183 >UniRef50_B1IED4 SIS domain protein n=10 Tax=Clostridium RepID=B1IED4_CLOBK Length = 253 Score = 114 bits (285), Expect = 4e-24, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 108/272 (39%), Gaps = 25/272 (9%) Query: 1 MNG-LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M + +I +Y L++ ++ + Y++ D + + + +A E S +++V A+K+G Sbjct: 1 MKLDISKIVDKYH-LSKVEESILIYIINNIDHVKEIGVRGVAKEHYTSTTTIVNLAKKIG 59 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 Y GF + LS L + + EK K + L + + Sbjct: 60 YSGFLDMYYNLSFTLKDKRNYFNS----------------EKNNKYYGVELEELLALIED 103 Query: 120 EKLHECVTMLRSARRIILTGIG--ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 + + + + +L + ++ G S +AQ F KL+ +GF + + Sbjct: 104 KDISDFIDLLIKNKNEVIYTNGLAFSYFIAQYFTRKLIVLGFRCIYSEAYESYDVNAIKA 163 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 LL+AIS +G + A++ + G K+++ TG N L + + Sbjct: 164 K---LLIAISKSGETDFIIRASESAKKNGIKIVSFTGEAENTLAKMSDINFKIYDMHTID 220 Query: 238 NSASIS-ACHA-QGMLTDLLFIALIQQDLELA 267 + +S + + ML + L +++ + Sbjct: 221 DRNKLSNSFYPNALMLFEFLIGKYLERIKVDS 252 >UniRef50_C1A8V3 Arabinose 5-phosphate isomerase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8V3_GEMAT Length = 323 Score = 113 bits (284), Expect = 5e-24, Method: Composition-based stats. Identities = 41/175 (23%), Positives = 77/175 (44%), Gaps = 2/175 (1%) Query: 100 EKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF 159 +++ A+ A+ +E +H + R+I+ G+G SGLVA+ A G Sbjct: 14 RRVLALEAEALRASETALGDEFVHAVQLLTECRGRVIVAGVGKSGLVARKMAATFTSTGT 73 Query: 160 NAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNA 219 A + + ++ + PDD+ + IS +G EL + + R+G +++A+T + Sbjct: 74 PAMFLHPVESVHGDLGIVGPDDVAILISKSGESDELLGLIEALARLGVRMIAMTAVAGSR 133 Query: 220 LQQRASHC--LYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIR 272 L + A L E + A ++ L D L +A++QQ A + R Sbjct: 134 LARHADVTLDLLVKEEACPHDLAPTTSTTVTMALGDALAVAVLQQKGFRAEDFAR 188 >UniRef50_A4FJ87 Transcriptional regulator, RpiR family n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FJ87_SACEN Length = 276 Score = 113 bits (284), Expect = 5e-24, Method: Composition-based stats. Identities = 56/269 (20%), Positives = 99/269 (36%), Gaps = 19/269 (7%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 L + +++A YLL DTA +L+S +LA A VSQ SV +F LG+ G+ + L Sbjct: 12 HRLTPAQRRIAAYLLANVDTAAYLTSVELAEAAAVSQPSVTRFVALLGFDGYGHFRRYLR 71 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN-SEEKLHECVTMLR 130 +A D + I E+ + + L T+L Sbjct: 72 QA-----------GSEPAADQDARGSKLQSGIDEDMRNLARLRTELADDSALRTAGTVLA 120 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD---DLLLAIS 187 S+ +++ G S +A F + KI + + +++ + D + + Sbjct: 121 SSNPLVVLGFRVSAPLASLFGYLAAKIHPDVRLLISGGSIVGDQLRHARQCGADATIVFA 180 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHA 247 RE A + +G + + +T T +AL A L E+ + A Sbjct: 181 MPRYPRETQRAMVQARDLGLRTVLVTDRTVSALTPDADDVLAAAVGEELV----FDSHAA 236 Query: 248 QGMLTDLLFIALIQQDLELAPERIRHSEA 276 L+ L A+ A R+ + E Sbjct: 237 VMSLSTSLLEAMADAAGASARRRLENFEQ 265 >UniRef50_C9N979 Transcriptional regulator, RpiR family n=2 Tax=Streptomyces RepID=C9N979_9ACTO Length = 282 Score = 113 bits (284), Expect = 5e-24, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 103/277 (37%), Gaps = 17/277 (6%) Query: 5 LRIRQRYQ--GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R+++ ++ L + +++A ++ + A LSS +LA AGVSQ SV +FA LG+ G Sbjct: 8 ARLQRLFEGQRLTPTQRRIAHSMVRRAADAPFLSSVELAELAGVSQPSVTRFAVALGFDG 67 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 +PAL+ L E +D + + E + + + Sbjct: 68 YPALRKHLRE-------VSPADAAAVDGVEDTFNEYQQAVRAEIENLRQLSELLADPAPV 120 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD-- 180 +L ++R +++ G+ A+ A+ F + K+ + V + ++L ++ Sbjct: 121 ERAGRLLAASRPLLVLGLRAASSQARGFGYFAAKVHPDVRVVDEGGSMLHDRVDAARRAG 180 Query: 181 -DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 L+ + RE+ A G V+ + + + + Sbjct: 181 ASALMCFALPRHPREVVDALAYAREQGLTVVTVADSAFAPVAAHSDVLIPAAVGTGLAFD 240 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + + +L + + L A R+ +A Sbjct: 241 TACAPMLMGRVLLEAMCDGL-----PEAQARLEEFDA 272 >UniRef50_C9A505 Transcriptional regulator n=4 Tax=Enterococcus RepID=C9A505_ENTCA Length = 258 Score = 113 bits (284), Expect = 5e-24, Method: Composition-based stats. Identities = 41/268 (15%), Positives = 93/268 (34%), Gaps = 29/268 (10%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + I+ + L ++ ++ DYLL L +++A S +++V+ AQKLG+ Sbjct: 13 MDLNVLIKGK--KLTDNELQILDYLLANTAAIDGLPLREIAKAIYTSPATIVRLAQKLGF 70 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ L L L + + + + ++ Sbjct: 71 SGYLELLYFLKNRLKN-----------------------QTITEAAIDYQIDATSIADTI 107 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + + I + G SG+VA+ K++ G V + Sbjct: 108 DAIKEIYGRNKDKFITIYATGFSGIVAEYLHKKMLVNGIKTLLVSASDSGGIISNNIENI 167 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +L+ IS +G +++ + G + Q A+ +E+ ++ Sbjct: 168 SMLITISKSGETQKVLEKMALANEHHIPTVLFCGNGDHRANQLATFSFEV-TDERPYDTQ 226 Query: 241 SI--SACHA-QGMLTDLLFIALIQQDLE 265 +I ++ +L + + A + E Sbjct: 227 NIQYTSFFGKLLLLMEYIVDAFTHVEKE 254 >UniRef50_Q03HM4 Transcriptional regulator n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03HM4_PEDPA Length = 193 Score = 113 bits (283), Expect = 6e-24, Method: Composition-based stats. Identities = 41/200 (20%), Positives = 80/200 (40%), Gaps = 8/200 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + + L ++++ L DY++ + ++ S +++A E VS ++ ++F +K+G+ Sbjct: 1 MNFFDIVEPHLKMLTKNEQVLFDYVVSNMNKIKNQSIREVAGETYVSTATFLRFVKKIGF 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF + + ++ + P ++ D + +I+ V + Sbjct: 61 AGFSEFTTVIKYTVLNENTKKTEPTPFEVSQTDYREEYLKNIIESV--------RVIPIK 112 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 KLHE L I L G S A+ + GFN RD + P+ Sbjct: 113 KLHEITKKLSDHPTIYLFSKGVSKYAAEYVYYIYTMAGFNVKYPRDYDFRQIASKQVKPN 172 Query: 181 DLLLAISYTGVRRELNLAAD 200 DL+ ++Y G E Sbjct: 173 DLVFILTYNGKNLEFVEMIK 192 >UniRef50_Q12C10 Transcriptional regulator, RpiR family n=2 Tax=Comamonadaceae RepID=Q12C10_POLSJ Length = 301 Score = 113 bits (283), Expect = 6e-24, Method: Composition-based stats. Identities = 48/229 (20%), Positives = 94/229 (41%), Gaps = 4/229 (1%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 GL+ + A ++ P S ++ A AG++ +++ + +Q LG+ GF A+K Sbjct: 12 LDGLSPELLRAARWIEAHPREVALHSMRECARRAGLAPATLTRLSQALGFNGFDAIKNLC 71 Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE-KLHECVTML 129 E+ A+Q Q + ++ E A A++ ++ +L + Sbjct: 72 QESFAAQAGYAGRAEVLQASARHSKDWLA--VLNETQHANTASIGGLNQRGQLEAAADAM 129 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASSPDDLLLAISY 188 ARRI G+ AS +A + + + N V+ L + DLL+A+S Sbjct: 130 LKARRIYFLGLRASHGLALHLHYTYGLLASNGVLVQGLGGTLSDQIGEMGRGDLLVAMSL 189 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 R+ A + L G ++ +T + + + A+H L A+ + Sbjct: 190 APYTRQTVDAVAQALGQGVDLMVLTDSALSPIARSAAHTLLFRADSPSY 238 >UniRef50_D1B671 KpsF/GutQ family protein n=2 Tax=Synergistaceae RepID=D1B671_THEAS Length = 334 Score = 113 bits (283), Expect = 6e-24, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 66/172 (38%), Gaps = 2/172 (1%) Query: 101 KLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFN 160 ++I++ A+ + E + + + R+++ G+G SGL+ + A L +G Sbjct: 23 QVIRQEARALEDGASRMGLELVRAARMVASCSGRVVVCGLGKSGLIGRKIAATLASLGCP 82 Query: 161 AAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNAL 220 A + + DD+ L +S +G RE+ R+G V+A+TG + L Sbjct: 83 AFFLHAAEGSHGDLGMVCRDDVGLFLSNSGTTREVLEMVPFFRRIGCPVIALTGRRDSPL 142 Query: 221 QQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDLELAPER 270 A L E A S+ Q + D L + + + Sbjct: 143 GLSADVVLDCSVGREADPLGIAPTSSTTLQLAVGDALAGMVTRLLGLRVEDF 194 >UniRef50_C6I0S8 Sugar isomerase, KpsF/GutQ family protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I0S8_9BACT Length = 333 Score = 113 bits (283), Expect = 7e-24, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 68/169 (40%), Gaps = 2/169 (1%) Query: 97 LVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMK 156 ++++E + A+ L +L + ++ +TGIG SG +A+ + Sbjct: 14 ETARRVLEEESQAIRDLLPRIDSSFAEAVGAILDNPGKLAVTGIGKSGHIARKVSATFSS 73 Query: 157 IGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT 216 G A + AL + D+LLA S +G E+ + R+ V+AI G Sbjct: 74 TGTPAFFLHPGEALHGDLGMLESRDILLAFSKSGETEEILALLPLLGRMEVPVIAIVGNK 133 Query: 217 PNALQQRASHCL--YTIAEEQATNSASISACHAQGMLTDLLFIALIQQD 263 + + ++A+ L E A S+ A + D L + ++ + Sbjct: 134 ASTIAKKATWALSAEVSHESGPLGIAPTSSTTAMLAMGDALAMTVLSER 182 >UniRef50_A6X2Q6 Transcriptional regulator, RpiR family n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X2Q6_OCHA4 Length = 284 Score = 113 bits (283), Expect = 7e-24, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 100/280 (35%), Gaps = 8/280 (2%) Query: 1 MNGLLRIRQRYQGL--AQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKL 58 M+ + IR + L +++DK +A Y+ +++ +A G+SQ +V ++ ++L Sbjct: 1 MSKEILIRLQSAELRKSKADKLIASYIERNLAELPFETAKSIAERLGISQMTVGRYLRRL 60 Query: 59 GYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS 118 G+ G LK AL ++ P+ + + L+++ + + + Sbjct: 61 GFDGLEELKTALRRGRSNPAWQVKGPVARLQQDF-REGKLLAGLVQQQIENLGTVYELTT 119 Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQAS 177 + E + L A + + +AQ FA +L + + + S Sbjct: 120 RPEWQETIDALIGASEVYVAAYQNVRGIAQYFASQLSYSRPGVSFMDGLNGTYAEVLDGS 179 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 + +L + A E R+G KV+ T + A L Sbjct: 180 RENRVLFLHDVRRFASKARPLAIEARRMGVKVILFTDEFCPWASEVADIALIVPGSHGPL 239 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + + + DL+ +I Q ER++ L Sbjct: 240 WDGAAT----MTAIMDLMLSHIIIQLGSQVDERVQSLTRL 275 >UniRef50_B6GDB9 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GDB9_9ACTN Length = 253 Score = 113 bits (283), Expect = 7e-24, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 87/245 (35%), Gaps = 12/245 (4%) Query: 18 DKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQ 77 + LA Y L + + L+ +A E S+S + +F Q +G+ F ALK S Sbjct: 17 ENTLAKYFLDHFENLKELNVYDVAEECYTSRSGIRRFCQSIGFDNFSALK--------SC 68 Query: 78 PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIIL 137 I D L + M +EE L ++ A ++L Sbjct: 69 EWEWETHRKFFIGYTDHPA-FKGHLSNQIERMMIDVNEQVTEEDLDSLAQLIHDAENVVL 127 Query: 138 TGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNL 197 S + + F ++ + + D ++ + P DL++ IS +G Sbjct: 128 LASDFSSMAVREFQQSMLFMHKIPQILTDSFGSENSLASLGPSDLVIVISASGNYARAAR 187 Query: 198 AADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFI 257 + + +VL T LQ+ L+ + + ++ A + L DL++ Sbjct: 188 S-ELARSAACRVLVTT-NHDCELQEFFDAVLHL-SPDGHYGERTVYAKYGINYLFDLIYN 244 Query: 258 ALIQQ 262 ++ Sbjct: 245 RYFEK 249 >UniRef50_C2EN35 RpiR family transcriptional regulator n=1 Tax=Lactobacillus ultunensis DSM 16047 RepID=C2EN35_9LACO Length = 256 Score = 113 bits (282), Expect = 8e-24, Method: Composition-based stats. Identities = 46/269 (17%), Positives = 93/269 (34%), Gaps = 21/269 (7%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + ++ + L ++ + Y+ DT + +LA E S S + K +K+GY Sbjct: 5 SFDEKVVKTKNKLTTNELTVLQYIHKNADTINRKTISELAKETHFSSSFISKLVKKIGYD 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F A++L L L + ES ++K + T ++ + Sbjct: 65 SFAAMRLDLKNDLVKKIESNEYG-----------------VLKNQNIDIAKTNSLLLQMN 107 Query: 122 LHECVTMLRSARRIILTGIGASG-LVAQNFAWKLMKI-GFNAAAVRDMHALLATVQASSP 179 + +A I + G G S + + LM + + + + + Sbjct: 108 FKPINKLFDTATAIYVYGTGHSQNNYMRELSRNLMALVNVPVIFLSGQSEFQSVIYTAKS 167 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI--AEEQAT 237 + S TG L A + +++ T F+ N L A++ L+ + T Sbjct: 168 TSCFIIASTTGKTPVLIDAVKILNLSQVPIISFTSFSDNELSDLATYNLFYYLTPIKNPT 227 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLEL 266 N +I + G + D + I + Sbjct: 228 NHRNIRSYLPLGYVVDFVIREYISHLQKK 256 >UniRef50_C8PCG0 Transcriptional regulator n=2 Tax=Lactobacillus RepID=C8PCG0_9LACO Length = 268 Score = 113 bits (282), Expect = 8e-24, Method: Composition-based stats. Identities = 51/268 (19%), Positives = 98/268 (36%), Gaps = 26/268 (9%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + R+ ++ L+ S+K++ +L HLS +LA + VS+SS+ + +K+G Sbjct: 3 DLKRRVWEKSGELSTSEKEIVRFLFSNSKLCSHLSLAKLATKLYVSESSIFRLCKKIGLS 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ L+ LS+ + + + E A+ LN S Sbjct: 63 GYSELRFELSDLAHERKINTI------------------DIATEVENAIQEVLNYCSTLD 104 Query: 122 LHECVTMLRSARRIILTGIGASG-LVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASSP 179 L + + A I L G S L+A+ +L IG + + L + ++ Sbjct: 105 LEKVFLDIEHANTIYLYSTGWSQELIARYLLHELFMIGKKVVMLPSAIEELKMVSKRATE 164 Query: 180 DDLLLAISYTGVRRELNLAADEML--RVGGKVLAITGFTPNALQQRASHCLYTIAEE--- 234 D+L +SY+G ++ ++ ++ T P L + + + Sbjct: 165 GDMLFIVSYSGDNVQIRDEISKIQLINNKIITVSFTTLRPAKLVSLVDYSFFFRTLKLKK 224 Query: 235 -QATNSASISACHAQGMLTDLLFIALIQ 261 A+I + DLL Q Sbjct: 225 FWVEGDATIDSFSPAYTFIDLLIAKYYQ 252 >UniRef50_Q2RYH6 KpsF/GutQ n=64 Tax=Proteobacteria RepID=Q2RYH6_RHORT Length = 366 Score = 113 bits (282), Expect = 9e-24, Method: Composition-based stats. Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 2/142 (1%) Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 + ++I++G+G SG VA A L G + V A + D ++A+S +G Sbjct: 88 RSGKVIISGMGKSGHVAAKIAATLASTGTPSFFVHPAEASHGDLGMIGRSDAVIALSNSG 147 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI--AEEQATNSASISACHAQ 248 EL R+G +++ITG P+AL A L E A ++ A Sbjct: 148 ETPELADMVAYTRRMGIPLISITGRHPSALSDAADVALVLPALTEACPHGLAPTTSTTAM 207 Query: 249 GMLTDLLFIALIQQDLELAPER 270 L D L +AL+++ A + Sbjct: 208 MALGDALAVALLERRGFTASDF 229 >UniRef50_Q9WXZ5 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=13 Tax=Thermotogaceae RepID=GLMS_THEMA Length = 606 Score = 113 bits (282), Expect = 9e-24, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 75/219 (34%), Gaps = 13/219 (5%) Query: 76 SQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATL------NVNSEEKLHECVTML 129 Q V + + K I E+ A+ L + E+L +L Sbjct: 229 QQRRVYHVNWDEKAAEKGGYKHFMYKEIMEDPQALVNALVGRVKNDRPFFEELEYYEELL 288 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYT 189 ++A RI + G S F + L + D+L+AIS + Sbjct: 289 KNADRIRVVSCGTSYYAGLVFKYFLENHTDIDVEIEVSSEFRYKRPHIKEGDVLIAISQS 348 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQG 249 G + + + G K+++I + L + + L+ A A+ A+ Sbjct: 349 GETADTLESVRLAKKHGAKIVSIVNVVGSTLDRESDVTLFMNA-GPEIGVAATKTYVAEL 407 Query: 250 MLTDLLFIALIQQDL------ELAPERIRHSEALVKKLV 282 + LL + +++ + E +++ L++ ++ Sbjct: 408 AVLYLLGLKIMEINGYWDREAEEILDKLVRMPELLENVL 446 >UniRef50_B8DD88 Phosphosugar-binding protein n=16 Tax=Listeria monocytogenes RepID=B8DD88_LISMH Length = 250 Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 48/264 (18%), Positives = 94/264 (35%), Gaps = 20/264 (7%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + + L+ ++K++ Y+ T +S LA VS ++V++ KL Sbjct: 5 SLYRLFAPQIEFLSPAEKQVFFYIDNHISTIEKMSLTSLAESTNVSTTTVIRMCHKLKLS 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK L S + D EK+ +++ Sbjct: 65 GFSELKFLL----------HSDKTETKPLSKDYSSTFLEKIRLGI--------EQLPKKE 106 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + T + A +I + +G + + + F+ L+ N D + Q DD Sbjct: 107 IEQVATRIAYAPKIYIACLGMTKTLGEYFSKSLVTSKKNVVFTYDSFIIDILPQIVERDD 166 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L++ IS +G A+ + V+AI + Q +Y +EE Sbjct: 167 LIIIISESGGTENTLSLAEHLKYNLSNVIAIVNNPNAQISQYVETIIYASSEE--FGEDL 224 Query: 242 ISACHAQGMLTDLLFIALIQQDLE 265 HA ++ L + + +Q + Sbjct: 225 FKHHHAPLLIVIDLILNIFEQQKK 248 >UniRef50_Q6F0H6 Putative transcriptional regulator n=1 Tax=Mesoplasma florum RepID=Q6F0H6_MESFL Length = 271 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 40/274 (14%), Positives = 110/274 (40%), Gaps = 13/274 (4%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L ++ D + + + Q L+ V ++++V+ +K G+ ++++ ++ Sbjct: 4 NLTFAEMSALDQINKNINFFVSNNLQNLSKNYNVGEATLVRLVKKRGFSSLKEMQISYAK 63 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 + + + + + + + ++ T + + +++ +L ++ Sbjct: 64 KIDIENLFGNSDNNQNTK-------IINDVANFEVFSIIQTSECINIKDINKTAELLINS 116 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI-SYTGV 191 + + GI S L A A L KIG N + + +H + + + +D ++ I S +G Sbjct: 117 NKRLFFGIENSQLSATFLANNLQKIGLNCSVYQSVHGAITELNFLNKEDSIILIFSSSGE 176 Query: 192 RRELNLAADEMLRVGGKVL---AITGFTPNALQQRASH-CLYTIAEEQATNSASISACHA 247 +E A + + + + + Q A+ ++ + + +IS+ Sbjct: 177 TKECIEVAKIAHEMNLRYIWIGSEFASKKSEYLQMANIKIFHSYHKNEILRFPNISSSSG 236 Query: 248 QGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 Q +++LLF +I + + + + S +VK Sbjct: 237 QLFISNLLFNIVIN-NKDGTSDILTKSNTMVKGW 269 >UniRef50_D2BP23 Transcriptional regulator, RpiR family n=3 Tax=Lactococcus lactis RepID=D2BP23_LACLK Length = 247 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 93/250 (37%), Gaps = 14/250 (5%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 L + + +YL ++ Q+A A VS SS+++ +K + GF K Sbjct: 1 MNHLTSVEIYIWNYLEENKAKIIQMTVAQIAESAHVSPSSIIRTLKKKNFSGFSEYKNME 60 Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 + L + +++ EN + T+ + E L + V + Sbjct: 61 KQKLNRHDWIYGLTKD------------ANQVVSENIEELLMTVRLLESENLAKVVENIF 108 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 A +++ G S +A +FA L + A ++ + ++ + ++ +S +G Sbjct: 109 HAASVVIISRGLSVRIADSFARDLQFLDVKAVSLYQDNMQAY-LEKLPRNTFVIGLSLSG 167 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA-TNSASISACHAQG 249 + A + R G KVLAITG + L +++ L + + + Sbjct: 168 ETDLIVATAQKAKRDGKKVLAITGNYKSRLVEQSDLLLLAYQKNLSGKILVDYNNMLPLE 227 Query: 250 MLTDLLFIAL 259 ++ LL Sbjct: 228 LIIHLLIQLY 237 >UniRef50_Q4A886 Transcriptional regulator n=5 Tax=Mycoplasma hyopneumoniae RepID=Q4A886_MYCH7 Length = 271 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 103/280 (36%), Gaps = 14/280 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L I + + L +K + ++ +P + +LA +S ++ + +KLG+ Sbjct: 1 MSVLT-ISKNF-KLTHIEKLIIRFIETKPRKFVEQTINELAATLFISVGTITQLTKKLGF 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F LK + E L ++ ++Q E + ++ TL + + Sbjct: 59 NNFKELKKFVIEWLKLDEDNNLYNENDQ----------IENINLLYVHSIEKTLAILNVS 108 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +++ V + +II G +S VA F+ L + N+ +++ + + + Sbjct: 109 QINRIVDTILKMDKIITYGTASSITVATEFSNNLRNLHLNSLCAKNISDIASWIGNPGS- 167 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 L+ S + R+ + + IT T + Y EQ N Sbjct: 168 TCLVIFSVSMASRDAVALTKLAKQHQINTIFITSNTNLEKNSFSEVV-YFDTLEQNNNIF 226 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 + + +Q + DL+ + + ++ E L K Sbjct: 227 PVGSKVSQLFIGDLISLKIRKKLNSSRSEFFNEFRRLWYK 266 >UniRef50_Q2GAE9 KpsF/GutQ family protein n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2GAE9_NOVAD Length = 340 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 2/134 (1%) Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVR 192 R+ ++G+G SG VA+ A L G A + + A+ + P D+L+ +S +G Sbjct: 62 GRVFVSGVGKSGHVARKIASTLSSTGRPACFIHPVEAMHGDLGMLCPGDVLIVLSNSGAS 121 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGM 250 EL D R+ +++AI + L + A L E N A ++ Sbjct: 122 MELRGLVDHAQRLSARIVAIGARPDSPLMRVADIALVIPDGPEACPVNIAPTTSTTMMLA 181 Query: 251 LTDLLFIALIQQDL 264 L D L +A++ Sbjct: 182 LGDALAVAVMSARG 195 >UniRef50_Q1LZ65 RpiR-like protein n=27 Tax=Lactobacillales RepID=Q1LZ65_STRMU Length = 274 Score = 112 bits (280), Expect = 1e-23, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 96/256 (37%), Gaps = 10/256 (3%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 + + L ++++ Y+ + L+ +L+ VS +++++ +K GY GF K Sbjct: 27 KNNKKLTETEEYTWQYITRDFNEIGKLNISELSQAINVSNATIIRTLKKKGYGGFSEFKH 86 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 + + + + + N+ D R + + + TLN + E + M Sbjct: 87 EIEQ----KKNNSLHVLTNKSLKKDTRRSIIKNY-----QEVMRTLNTLDVTAIEESILM 137 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + A+RII+ G S L+A K + D + + + DL+L IS Sbjct: 138 IEKAQRIIIFARGFSELIASEMLVKFQLLNKYCELHTDPNIIRPVSARLTSKDLVLFISL 197 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY-TIAEEQATNSASISACHA 247 G L AA ++ K + ++ ++L S L E + + Sbjct: 198 NGETVALVDAARNCIKNRVKTILLSASESSSLAHLTSLQLIGFKTELSYFPDYEVHSRLP 257 Query: 248 QGMLTDLLFIALIQQD 263 +L+ +L A Sbjct: 258 LSILSRILLDAYAASL 273 >UniRef50_Q3JP70 Arabinose-5-phosphate isomerase n=5 Tax=Proteobacteria RepID=Q3JP70_BURP1 Length = 351 Score = 112 bits (280), Expect = 1e-23, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 72/205 (35%), Gaps = 2/205 (0%) Query: 70 LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTML 129 + S+ ++ + A+ + S+ +L Sbjct: 21 VRRCAPQYSPPFSMAHDGSQMNHHNYLDSARQVFDIESRALASLSARVSDSFGDAVDAIL 80 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYT 189 RS+ R+++ G+G SG++ + A G + + A + + D LAISY+ Sbjct: 81 RSSGRVVVCGMGKSGIIGRKIAATFASTGTPSFFMHPGEAYHGDLGMVTSADTFLAISYS 140 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ--ATNSASISACHA 247 G E+ + ++A+TG + L Q A L E++ A S+ A Sbjct: 141 GETDEVIKLIPFLKSNRNYLVALTGNARSTLAQAAHSHLDAGVEQEACPLQLAPTSSTTA 200 Query: 248 QGMLTDLLFIALIQQDLELAPERIR 272 + D L + L++ R Sbjct: 201 ALAMGDALAVTLMKARGFRPENFAR 225 >UniRef50_B2KC19 KpsF/GutQ family protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KC19_ELUMP Length = 329 Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 32/185 (17%), Positives = 73/185 (39%), Gaps = 2/185 (1%) Query: 88 QIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVA 147 D ++ +++++ + + + + + R+++ GIG SG++ Sbjct: 1 MKNNSDEIKKTAKEVLEVENNELAKSHKSIDGNFIKSVNIINSISGRVVVLGIGKSGIIG 60 Query: 148 QNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGG 207 + A L G A + + AL + D +LA+S++G E++ + + Sbjct: 61 RKIAATLASTGTPALFMHPVEALHGDLGMIQTSDAILALSFSGNTEEISKLIPLISKRKL 120 Query: 208 KVLAITGFTPNALQQRASHCL--YTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLE 265 V+++TG + L + + + + E N A S+ L D L I L++ Sbjct: 121 PVISMTGNENSKLAKLSDVHIKMHVSKEACPYNLAPTSSTTVMLALGDALAICLMRLKHF 180 Query: 266 LAPER 270 + Sbjct: 181 EKKDF 185 >UniRef50_B3E057 Arabinose 5-phosphate isomerase and CBS domains n=5 Tax=Verrucomicrobia RepID=B3E057_METI4 Length = 325 Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 36/187 (19%), Positives = 78/187 (41%), Gaps = 5/187 (2%) Query: 91 GDDPLRLVGEKLIKENTAAMYATLNVNS---EEKLHECVTMLRSARRIILTGIGASGLVA 147 + L + +++ A+ + E+ + + + +I++TG+G SG + Sbjct: 1 MQEDLVGLAKRVFDLEMDALRIVRKQLNAAFEQAILVLEKTILANGKIVVTGVGKSGHIG 60 Query: 148 QNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGG 207 + A L G + + ++A + + D ++A+SY+G E+ + R+ Sbjct: 61 RKIAATLTSTGAPSVVLDAVNAFHGDLGMVNRGDAVVALSYSGETEEILRLVPHLKRMTT 120 Query: 208 KVLAITGFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDLE 265 ++AITG + L + + L E N A S+ A +L D L + L+++ Sbjct: 121 SLIAITGNENSTLAKNSDLVLSVRIDREACPLNLAPTSSTTAMLVLGDALAMVLLEKRGF 180 Query: 266 LAPERIR 272 + R Sbjct: 181 KKEDFAR 187 >UniRef50_O68956 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=108 Tax=Bacteria RepID=GLMS_MYCS2 Length = 628 Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 42/272 (15%), Positives = 80/272 (29%), Gaps = 22/272 (8%) Query: 21 LADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF---PALKLALSEALASQ 77 +A ++ A L ++A V + + G + + + Sbjct: 205 VAAFI-EHTRDAVELGQ----DQAVVLTADGYRITDFAGNDHLEAGRDFREFHIDWDLNA 259 Query: 78 PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIIL 137 E + V + L+ V E++L + LR ++ + Sbjct: 260 AEKGGYDYFMLKEIAEQPSAVADTLL----GHFDKNRIVLDEQRLSD--QELREIDKVFI 313 Query: 138 TGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNL 197 G + + + V L++AIS +G + Sbjct: 314 VACGTAYHSGLLAKYAIEHWTRLPVEVELASEFRYRDPVLDRSTLVIAISQSGETADTLE 373 Query: 198 AADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFI 257 A KVLAI + + + A LYT A A+ AQ L+ + Sbjct: 374 AVRHAKTQKAKVLAICNTNGSQIPREADAVLYTRA-GPEIGVAATKTFLAQIAANYLVGL 432 Query: 258 ALIQQDLELAPE-------RIRHSEALVKKLV 282 AL Q P+ + L+K+++ Sbjct: 433 ALAQARGTKYPDEVAREYRELEAMPDLIKRVL 464 Score = 41.1 bits (95), Expect = 0.041, Method: Composition-based stats. Identities = 14/175 (8%), Positives = 46/175 (26%), Gaps = 14/175 (8%) Query: 101 KLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF- 159 + ++ + L + + ++ G VA A KL ++ + Sbjct: 451 RELEAMPDLIKRVLAGMD--SVAALAERFAPSSTVLFLGRHVGYPVALEGALKLKELAYM 508 Query: 160 NAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLA-----ADEMLRVGGKVLAITG 214 +A + + ++ + + + A E+ G + I Sbjct: 509 HAEGFAAGELKHGPIALIDENLPVIVVMPSPKNAAMLHAKLLSNIREIQARGAVTVVIAE 568 Query: 215 FTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPE 269 + ++ A H + + + + + + + + Sbjct: 569 EDDDTVRPYADHLIEIPSVSTLFQ--PLLSTIP----LQVFAAGVARARGYDVDK 617 >UniRef50_A6NTR6 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A6NTR6_9BACE Length = 324 Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 68/168 (40%), Gaps = 2/168 (1%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG 158 +L A+ + + + L ++ ++I+TG+G G + A + +G Sbjct: 12 ARRLFDTEIRALESVRDSLDQRFLDILEQIVNCRGKVIITGMGKPGHIGTKIAATMASLG 71 Query: 159 FNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPN 218 A + AL + DD++LAISY+G E+ + +G ++ I+G + Sbjct: 72 TPAFYLHPAEALHGDLGMVGADDVVLAISYSGESDEVIRLIPSLKLIGATLIGISGNADS 131 Query: 219 ALQQRASHCLYTI--AEEQATNSASISACHAQGMLTDLLFIALIQQDL 264 L + + + E + A S+ A +L D L + ++ Sbjct: 132 TLIRFSDYSFVFPPFEEACHMHLAPTSSTTAALVLGDALAVCASERYG 179 >UniRef50_A0LE58 KpsF/GutQ family protein n=8 Tax=Bacteria RepID=A0LE58_SYNFM Length = 357 Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 41/202 (20%), Positives = 82/202 (40%), Gaps = 2/202 (0%) Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 E ++ P + + + +++ + + L+ SE + + Sbjct: 12 QEEPSAVPLLRKGSTEHPAASTKGILEIAADVLRIESEGILHLLDHISESFARAVLWIYE 71 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 + RII+TGIG SG+V + L G A + + A+ + D++LA+S +G Sbjct: 72 AGGRIIVTGIGKSGIVGRKIVATLSSTGTPALFIHPVEAMHGDLGMVRAGDIVLALSNSG 131 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY--TIAEEQATNSASISACHAQ 248 ELN+ + +G +++A TG T + L Q + +Y E ++ A Sbjct: 132 ETDELNIILPSLKNIGTRIIAFTGDTSSTLAQYSDLTVYTGVPREACPMGLVPTASTTAM 191 Query: 249 GMLTDLLFIALIQQDLELAPER 270 + D L +AL++ + Sbjct: 192 LAMGDALAVALLRLRNFQERDF 213 >UniRef50_C4FYW5 Putative uncharacterized protein n=2 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FYW5_ABIDE Length = 286 Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 46/270 (17%), Positives = 108/270 (40%), Gaps = 12/270 (4%) Query: 5 LRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFP 64 I + ++ + Q +K + ++ + +AR SS+ ++ VS++S+ +FA+K GYKG+ Sbjct: 25 QNIEKNFEDMTQLEKSIGEFFIKN-KSARDFSSKGISGLLYVSEASLHRFAKKCGYKGYR 83 Query: 65 ALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHE 124 + + + ++ + + + + KL T + + + ++ + Sbjct: 84 EFIFSYEKDIENERNNGTDEK--------KVNQLIIKLKAAYTTLVEENFGLIKDNQIRK 135 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 T+L S +R+ILTG V + + K +K+G + V L +V + D L++ Sbjct: 136 IATLLNSGKRVILTGSETENAVFEEYKLKYLKLGIDINTVTKKEFLEPSVDLLNKDSLVI 195 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 +G L + ++ IT + + + N S+ Sbjct: 196 VCDISGENDNLKTVVQKAEVKEADIVLITANEACEYADLCNEVIKVSYPKGLANVISM-- 253 Query: 245 CHAQGMLTDLLFI-ALIQQDLELAPERIRH 273 M D+++ ++ A ++ + Sbjct: 254 QMVILMTMDVIYSYCSANKNYFKAIKKEKE 283 >UniRef50_B6IXW6 Sugar isomerase, KpsF n=1 Tax=Rhodospirillum centenum SW RepID=B6IXW6_RHOCS Length = 330 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 46/184 (25%), Positives = 74/184 (40%), Gaps = 1/184 (0%) Query: 93 DPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAW 152 DP+ L+ + A + L+ + ++ G+G SGL+A+ A Sbjct: 5 DPIIASARDLLHIEAKTVLAQEQSLDDGFLNVVNHIGTRDTNTLVAGVGKSGLIARLLAS 64 Query: 153 KLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAI 212 KL +G A AL + PDDLL+ +S +G REL ++ G +V A+ Sbjct: 65 KLASVGTRAWYYSTTDALHGELGGLRPDDLLILLSNSGQTRELVDLGRCAIQRGARVAAM 124 Query: 213 TGFTPNALQQRASHCLYTIAE-EQATNSASISACHAQGMLTDLLFIALIQQDLELAPERI 271 P+AL + A L E E ++ A L D L IA+ ++ E Sbjct: 125 VSRVPSALSRIADWTLRVHVEREATETRLPTASTAAMLALGDALVIAVARRRGFTVDEYA 184 Query: 272 RHSE 275 R+ Sbjct: 185 RNHP 188 >UniRef50_Q2ST84 Phosphosugar-binding transcriptional regulator, RpiR family, putative n=3 Tax=Mycoplasma mycoides group RepID=Q2ST84_MYCCT Length = 265 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 51/268 (19%), Positives = 105/268 (39%), Gaps = 9/268 (3%) Query: 2 NGLLRIRQRYQ-GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 + L +IR Q Q K + +LL R L+ +++ E S + + +FA+KL Sbjct: 4 DLLTKIRDLIQTDCNQDYKNIGAFLLKNYSNIRSLTITKISKECNTSPTQITRFAEKLNL 63 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 KGF LK L S+ D + + ++ Sbjct: 64 KGFSELKYRL--DDISKSIIIDNQFIPISSRIDDKTKFYKDYFEILNNSIKQQEANLKNL 121 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++E ++ A ++ L S +++NF +L +A + D ++ + P+ Sbjct: 122 PINEVANLISKANKVYLFAFNLSYNISKNFIQRLRWYQKDAISESDYISIKTYINIIKPE 181 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++ I+ +G + A+ + K++ I G +++ LY +E S Sbjct: 182 DLVILITISGENEYIKNIAESL-NRKVKIVGI-GPKQSSMINLFDKYLYFQTDESELWS- 238 Query: 241 SISACHAQGM--LTDLLFIALIQQDLEL 266 I++ AQ L D +++ ++ + Sbjct: 239 -INSIKAQLTVQLLDFVYVKWLKSTKKK 265 >UniRef50_Q6AQ42 Related to polysialic acid capsule expression protein (KpsF) n=1 Tax=Desulfotalea psychrophila RepID=Q6AQ42_DESPS Length = 327 Score = 111 bits (277), Expect = 3e-23, Method: Composition-based stats. Identities = 42/176 (23%), Positives = 75/176 (42%), Gaps = 2/176 (1%) Query: 97 LVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMK 156 +K+++ + A EE L ++ R+++TGIG SG+V Q + L Sbjct: 8 EAAKKVLEIEEQGLAAVRENIGEEFLAAVEAIVNCPTRLVITGIGKSGIVGQKISATLNS 67 Query: 157 IGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT 216 IG ++ + + AL + D++LAISY+G ELN + G ++ +TG Sbjct: 68 IGTSSFFLHPVEALHGDLGMVMATDVVLAISYSGETAELNGLLRSLKARGNTIIGMTGGA 127 Query: 217 PNALQQRASH--CLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPER 270 + L + + AE A ++ A L D L + L+ + A + Sbjct: 128 KSTLAMASDIFLNIRIPAEACPLGLAPTTSTTATMALGDALGVVLLNRKQFKAEDF 183 >UniRef50_UPI000196CB04 hypothetical protein CATMIT_02765 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196CB04 Length = 230 Score = 111 bits (277), Expect = 3e-23, Method: Composition-based stats. Identities = 34/251 (13%), Positives = 91/251 (36%), Gaps = 21/251 (8%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 + L +++ + +Y++ + S ++LAN VS +++++F +K+G +GF LK L Sbjct: 1 MESLNETEAYVYNYVVKNTKKVLNASIRELANYTHVSTATIMRFCKKMGCEGFTELKYRL 60 Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 E + +Q + + + + + + + E +H +++ Sbjct: 61 KEHVEAQETKE------------------DDVSDQFASFIERVKSSDYLESIHRSAAIIK 102 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 + I+ GIG + A+ + L +G+ V + V +++A Sbjct: 103 QSDSILTLGIGINSDFAKYTSRLLSHVGYYCYGVDGAAYPVQRVAEGHQG-VIIAFYEQR 161 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGM 250 ++ L ++ ++ +++ ++ I + Sbjct: 162 QKKLLFEEIYRYKNKNYIIIMLSNNNMGSMEHLCDEVIHISDGNVMLGK--IYSGVPMLY 219 Query: 251 LTDLLFIALIQ 261 + L L + Sbjct: 220 AIEKLAYELTK 230 >UniRef50_B6BVE7 Arabinose 5-phosphate isomerase n=1 Tax=beta proteobacterium KB13 RepID=B6BVE7_9PROT Length = 326 Score = 111 bits (277), Expect = 3e-23, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 69/179 (38%), Gaps = 2/179 (1%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG 158 +K++ + + + + + RIIL+G+G SG +A A L G Sbjct: 15 AKKVLDIESIEINNAQKFIDDNFADIIIKLSECKGRIILSGMGKSGHIAGKIASTLSSTG 74 Query: 159 FNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPN 218 A + A + + DD+++ +S +G E+ + R+G ++AIT + Sbjct: 75 SPAFFMHPGEASHGDLGMITHDDIVIFLSNSGESDEIYNLIPSIKRIGASIVAITSNEKS 134 Query: 219 ALQQRASHCL--YTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 + + A H + E A ++ + D + ++L Q + ++ Sbjct: 135 EIAKYADHHISSKVSTEACPLGLAPTASSALMLAIGDAIAVSLFQLKGFTTEDFLKSHP 193 >UniRef50_C3RJ80 Predicted protein n=3 Tax=Bacteria RepID=C3RJ80_9MOLU Length = 257 Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 86/229 (37%), Gaps = 12/229 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + Y S++K+ +L P + S L + S+S++++F QKLGY Sbjct: 1 MDFKKTVAIHYTEFTPSERKICARILEDP-QIVNNSIVVLGDLCETSKSAILRFYQKLGY 59 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +G+ K ++ E+ + E + ++ +E + + ++ + Sbjct: 60 RGYSEFKYSVEESFKNNDEKKL-----------SNESLLSQISQEYSNTILELGALDYDH 108 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L E +++ ++ GI + A + L +VR+ L + + + D Sbjct: 109 QLKELASLIDKYPHVLSIGINNTYFAASQLEYSLYSHNRFIQSVREDIQLTYLINSINQD 168 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY 229 L + S +G E G K++ IT + L Sbjct: 169 YLCIIYSVSGSTYTYENFIKEASAKGAKIVLITIDGNSELLPLVDLAFV 217 >UniRef50_Q6MPN9 Polysialic acid capsule expression protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MPN9_BDEBA Length = 326 Score = 110 bits (276), Expect = 4e-23, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 71/175 (40%), Gaps = 4/175 (2%) Query: 101 KLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILT-GIGASGLVAQNFAWKLMKIGF 159 K+++ A+ A + + V M+ + I+ G+G SG +A+ A G Sbjct: 10 KVLEVEAQAILALKERL-GDSFEQVVKMITACDGKIVLTGMGKSGQIARKLASTFSSTGT 68 Query: 160 NAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNA 219 A + + + +D+++A+SY G E + R G ++AITG ++ Sbjct: 69 PAVFLHPAESSHGDLGLVENNDVVIALSYGGESPEFAGILRFVSRKGIPLIAITGKPESS 128 Query: 220 LQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQDLELAPERIR 272 L + A L E+ A ++ A + D + +A++ + + + Sbjct: 129 LAKAAQVTLNVHVSEEACPLGLAPTASSTATLAMGDAVAMAVMAEKGFSSEDFAE 183 >UniRef50_C7LLS0 Transcriptional regulator, RpiR family protein n=3 Tax=Mycoplasma mycoides group RepID=C7LLS0_MYCML Length = 275 Score = 110 bits (276), Expect = 4e-23, Method: Composition-based stats. Identities = 40/282 (14%), Positives = 99/282 (35%), Gaps = 16/282 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLA----DYLLLQPDTARHLSSQQLANEAGVSQSSVVKFA- 55 M+ I + L++ + +L + + + ++A S +++ +F Sbjct: 1 MDVTKLIL-KLDQLSKEHSSASGITSRIILDNIELITNSTISKVAQITYTSPATITRFCQ 59 Query: 56 QKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLN 115 + L GF L+ L L Q E + + N+ + + + + AT Sbjct: 60 RHLDISGFSELQTLLRVYLNQQEEQNRLLLQNKDKKISKFEEISKAI--------NATDA 111 Query: 116 VNSEEKLHECVTMLRSARRIILTGIGAS-GLVAQNFAWKLMKIGFNAAAVRDMHALLATV 174 + ++ + V + + + + L S A K+ IG + L Sbjct: 112 LIETNQVDKLVKAIYNTKTVALISYDNSVNHAVTELAEKMNLIGIPPVIINQQDLLDYYT 171 Query: 175 QASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL-YTIAE 233 + S + + IS+ + ++ + G ++ I+ PN + + Y + + Sbjct: 172 KISDSSWVFIVISHFAENITTYQSIVQLKKNGSRIGLISMNKPNKYSSVCDYWIKYAVTD 231 Query: 234 EQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 SA + + +LF ++ +D + + I+ + Sbjct: 232 ADPLQKIKHSANFSLLYVVQVLFNRILTKDHDRFEKIIKTLK 273 >UniRef50_A3VSH4 Arabinose 5-phosphate isomerase n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VSH4_9PROT Length = 327 Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 60/173 (34%), Gaps = 2/173 (1%) Query: 100 EKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF 159 ++ A++ + + ++ ++TG+G SG + + A G Sbjct: 15 RAVLTTEANALHTLGEQLDDAFAAAVRHLTATSGFTVVTGVGKSGHIGRKMAATFASTGT 74 Query: 160 NAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNA 219 + V A + P +L+AIS +G REL R ++A+T + Sbjct: 75 PSFFVHPTEASHGDLGMLDPKGVLIAISNSGETRELRDILLYANRRHVPLIAMTARPDSF 134 Query: 220 LQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDLELAPER 270 L +RA L E A S+ L D L +A + + Sbjct: 135 LAKRAEVTLLLPRTPEACPNGLAPTSSTTMTLALGDALAVAAMTARGFSKEDF 187 >UniRef50_B7ATA5 Putative uncharacterized protein n=4 Tax=Bacteria RepID=B7ATA5_9BACE Length = 635 Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats. Identities = 35/227 (15%), Positives = 74/227 (32%), Gaps = 14/227 (6%) Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLN------VNSEE 120 K+ + E + K I E A+ T+ + Sbjct: 248 KICDIHGMEINKELQTADWDEDAAEKGGYEHFMLKEIHEQPTAVRTTITPRIVNGMPDFA 307 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + L S R+I + G + + + K+ + V + Sbjct: 308 SDGIDINKLSSYRQIFIVACGTAMHAGMVGKYVIEKMARVSVTVDIASEFRYRDPLITDK 367 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 DL++ IS +G + + LA+ +++ + A H +YT A + A Sbjct: 368 DLVIVISQSGETADTLAVLKLAKEMKAATLAVVNVKGSSIAREADHVIYTHA-GPEISVA 426 Query: 241 SISACHAQGMLTDLLFIALIQQDL-------ELAPERIRHSEALVKK 280 S A Q + L+ AL ++ E++++ A++++ Sbjct: 427 STKAYMVQVAVMYLIAFALSRETGHITDAQCAEFTEKLKNIPAVIEE 473 >UniRef50_B6G7Y4 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G7Y4_9ACTN Length = 277 Score = 110 bits (275), Expect = 5e-23, Method: Composition-based stats. Identities = 48/267 (17%), Positives = 93/267 (34%), Gaps = 11/267 (4%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 L I Q ++ ++A +L D + +S Q+A+ VS++SV +F + LGY+ Sbjct: 7 KLLSYIDTSMQR--DNNYQIAVKMLENYDALKDMSIAQIADMCYVSKASVSRFCRFLGYE 64 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F + AL + +E + AT++ + + Sbjct: 65 SFKEMHDALGIDYPISYDYSQR---FFCNLTADPHAAFLDYAREAQQNIAATISEKNLAE 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L + + + R+ + KL +G D + LA ++ +D Sbjct: 122 LPKIAYAIHNCCRVAFFSHHFLWDTGRYLQNKLFSMGKVMDLHLDQASQLACARSLQSED 181 Query: 182 LLLAISYTGVRR-ELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 L + S G + + VLAIT T N +A+ + ++A Sbjct: 182 LAIICSVGGSYPMRYVDVCNSIRDSKCSVLAITQNTSNPYWNQATFIMQCG-----ESNA 236 Query: 241 SISACHAQGMLTDLLFIALIQQDLELA 267 + + + DL+ + Q A Sbjct: 237 NDTGKYGALAAIDLVVQQYLLQYGSDA 263 >UniRef50_C4XDS0 Putative uncharacterized protein n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XDS0_MYCFE Length = 267 Score = 110 bits (275), Expect = 5e-23, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 103/251 (41%), Gaps = 5/251 (1%) Query: 8 RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALK 67 ++ + + L ++ P S Q+ + VSQSS+ +F + LG++ + L+ Sbjct: 10 KKLVENYKDTYSYLIKWIEENPHEFLACSQHQITEKIYVSQSSLSRFTKFLGFESYRELQ 69 Query: 68 LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 + ++ + + + I D K+ ++ A N ++ + V Sbjct: 70 IYVARKVEQFLPNETYKIDEIKDAKD----CILKVFQQYQNISKAGFNTIETIQIEKLVN 125 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL-LAI 186 L +++I+ GIG SG++ A +L +IG + + +H S+ DD+ + I Sbjct: 126 NLIKYKKLIIFGIGTSGIIGSYLAKQLTRIGIISVCINSIHDFKDAYNESNKDDVFYIII 185 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S + E+ AA+ + + +T + S +Y Q + I + Sbjct: 186 SKSFKNHEVKEAAEILDKSNFNFQILTRNENVSYANCTSPIIYDYIPAQKNFNYDIVSKL 245 Query: 247 AQGMLTDLLFI 257 + ML D+++I Sbjct: 246 SLFMLIDIIYI 256 >UniRef50_C6X0T7 Arabinose 5-phosphate isomerase n=2 Tax=Flavobacteriaceae RepID=C6X0T7_FLAB3 Length = 319 Score = 110 bits (275), Expect = 6e-23, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 67/185 (36%), Gaps = 2/185 (1%) Query: 90 RGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQN 149 ++ + I+ + + N L + S ++I+ GIG S V Sbjct: 1 MNNEEILRTARTAIETEISELENLKNRLDASFLKAVEIINSSKGKLIVVGIGKSAHVGNK 60 Query: 150 FAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKV 209 L G + + AL + D++L IS +G E+ + + Sbjct: 61 IVATLNSTGTPSQFLHASEALHGDLGVIQKSDVVLCISNSGNSPEIVNLLTYLKGYSSAL 120 Query: 210 LAITGFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQDLELA 267 + +TG + L + + L T E++ A S+ Q L D+L + L++ + Sbjct: 121 IGMTGNLNSKLAEISDVVLNTSVEKEACPIKLAPTSSTTVQMALGDVLAVCLMEINGFKE 180 Query: 268 PERIR 272 + + Sbjct: 181 SDFAK 185 >UniRef50_A0P1C3 SIS domain protein n=2 Tax=Rhodobacteraceae RepID=A0P1C3_9RHOB Length = 289 Score = 110 bits (275), Expect = 6e-23, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 95/283 (33%), Gaps = 16/283 (5%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L R++ L + + +LA ++ L + + + LA +AGVS+ +V + ++LG G Sbjct: 16 FLKRLQDETPKLPKQEARLAQFVSLNISSLGLETGKSLAEKAGVSEVTVGRLLRRLGCDG 75 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 LK L E + S IR + ++ + N Sbjct: 76 MKGLKQLLREHYSVTTASFVTDGDIPIRFVET--------LEAEVQGLTNVFNQTQGGNW 127 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM----HALLATVQASS 178 E +L A I TG + ++FA +L N + L S+ Sbjct: 128 DEVTRLLSDAETIFATGFQSIRGTVEDFARRLALARKNVHFLSAHDSMLGEWLDQSPQSA 187 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 L+ + E A G V+ ++ + ++ A +Y + Sbjct: 188 ASSCLILVDVVPYASESVKLARLAKSQGRSVIVVSDEYCHWSREIADAAIYAPSRTGLF- 246 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + L+ + + + R+ +A KKL Sbjct: 247 ---LESTIGIVAALSLMVDVAARANETASAHRLVQWKANSKKL 286 >UniRef50_B9KF21 Arabinose-5-phosphate isomerase n=29 Tax=Bacteria RepID=B9KF21_CAMLR Length = 318 Score = 110 bits (275), Expect = 6e-23, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 69/172 (40%), Gaps = 2/172 (1%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWK 153 + +++ + + + + +EE +L R +++G+G SG V A Sbjct: 5 DAIKIAKEVFEIESKTILDLCDTLNEEFSKAVELILSIKGRCVVSGMGKSGHVGAKIAAT 64 Query: 154 LMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 L G + + AL + + +D+LLAIS +G E+ + + ++ + Sbjct: 65 LASTGTPSFFMHPGEALHGDLGMIASEDVLLAISNSGETEEVLKLIPVIKKRKIPLIVMA 124 Query: 214 GFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQD 263 G + L ++A + E A S+ A + D + +AL++ Sbjct: 125 GDQNSTLAKQADVFINIAVKKEACPLQLAPTSSTTATLAMGDAIAVALMKAR 176 >UniRef50_D2R6F2 KpsF/GutQ family protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R6F2_9PLAN Length = 365 Score = 110 bits (275), Expect = 6e-23, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 68/184 (36%), Gaps = 2/184 (1%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWK 153 + ++ + A+ + +L +IL+G+G +GL+A Sbjct: 16 DPLQLARTVLLSESDAIAGLATRLDHHFVSAVKMLLDCRGSLILSGMGKAGLIASKLTAT 75 Query: 154 LMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 G + V A+ + + D++L +SY+G E+ + G ++AIT Sbjct: 76 FASTGTRSHFVHPAEAIHGDLGRIAEGDVVLMLSYSGETEEITRILPMLRDFGASIIAIT 135 Query: 214 GFTPNALQQRASHCLYTI--AEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERI 271 G + L + A+ L E A ++ A L D L I + Q A + Sbjct: 136 GQPSSTLARAATVVLDLGRITEACPLGLAPSTSTAAMLALGDALAIVVSQSRGFSADDFA 195 Query: 272 RHSE 275 R+ Sbjct: 196 RYHP 199 >UniRef50_C1RI47 Transcriptional regulator n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RI47_9CELL Length = 296 Score = 110 bits (274), Expect = 7e-23, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 98/280 (35%), Gaps = 17/280 (6%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R+ RY L ++K AD LL S+ +LA AGVS++++ + + LG+ Sbjct: 21 LDERVAARYAELPPQERKGADVLLEHFGDLATYSAAELAALAGVSKATMSRLFRSLGFDD 80 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F ++ L + E AA L Sbjct: 81 FSQVRDHLRALRQHGLPLGLGDAPDLDAHV------------EAEAAAVRVAVAALAVHL 128 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSPDD 181 +L A R+++ G+ S +A + +L ++ + A V L + SP D Sbjct: 129 DPVADLLAHAPRVVVVGLRTSYPLALHLRQQLAQVRPHVALVPQPGQSLAEDLVDLSPQD 188 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 ++ ++ + + G V+ + T AL A+ + + + + Sbjct: 189 AVVLVALRRRPPGVRALVARLAEAGTPVVLLADPTARALAAHATWWVQCPVQTR----GA 244 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + A + L A++ + +R+ ++ + L Sbjct: 245 FDSYAAASSVVAALADAVLGRRGRTGEQRVAGIDSAYRAL 284 >UniRef50_A4X3Y2 Helix-turn-helix protein RpiR n=3 Tax=Actinomycetales RepID=A4X3Y2_SALTO Length = 283 Score = 110 bits (274), Expect = 7e-23, Method: Composition-based stats. Identities = 55/268 (20%), Positives = 102/268 (38%), Gaps = 19/268 (7%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L + +++A L+ Q +LS+ ++A AGVSQ SV +FA LG+ G+PAL+ L E Sbjct: 21 RLTPTQRRIAHCLVQQGPAVAYLSAAEVAELAGVSQPSVTRFAMALGHDGYPALRRHLRE 80 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN-SEEKLHECVTMLRS 131 A+ P + ++ ++ + + +++ +L + Sbjct: 81 LTAAPRGGRPNPDNE-----------LQQAVRAEIENLDRLADQFADRDRVAAAGRVLAA 129 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD---DLLLAISY 188 + + + G+ A+ +A FA+ K+ + + D +LL + + LLA+ Sbjct: 130 SHPLPVLGLRAAAPLAAYFAYFAAKVLPDVRVLDDGGSLLTDRIEQAAEAGATALLALVL 189 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 RE A E G V+ IT + + A L Q + Sbjct: 190 PRYPREALDALREARTAGLTVVTITDSPVSPAGEHADVVLPAAVGAQLVFDLHTAPMTLA 249 Query: 249 GMLTDLLFIALIQQDLELAPERIRHSEA 276 +L + A R+ EA Sbjct: 250 MVLLQAICDA----APVQTQRRLEAFEA 273 >UniRef50_C9A748 Transcriptional regulator n=1 Tax=Enterococcus casseliflavus EC20 RepID=C9A748_ENTCA Length = 245 Score = 110 bits (274), Expect = 7e-23, Method: Composition-based stats. Identities = 38/253 (15%), Positives = 86/253 (33%), Gaps = 16/253 (6%) Query: 7 IRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPAL 66 + + ++ + +L Y+L Q +S ++LA+ S ++V++F +K +GF Sbjct: 3 LTAENKSFSKKEWQLFQYVLNQQAEVCSMSIRELADATKTSSTTVLRFCRKFDCEGFSEF 62 Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 K+ L + ++ + ++ K E L Sbjct: 63 KIKLKK---------------TLQKQGKTDRLFKQDKKALHYFFERMDESFYRETLLTIA 107 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 + + +IL S L K ++ + + + + + S + LL Sbjct: 108 KRISKTKLLILASDRESTLALTYAQQKFARLDKIVSVEEEAAPIKSVWRTLSSEATLLVF 167 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S G L E G +++T + ++ + + + S+S+ Sbjct: 168 SNKGADPFLESLITECTTAGISTISLTNRSTTSIAKLSERNFAYYFSDNQAAD-SLSSQI 226 Query: 247 AQGMLTDLLFIAL 259 L +LLF + Sbjct: 227 PAIYLVELLFDLV 239 >UniRef50_Q1MS86 FOG: CBS domain n=10 Tax=Desulfovibrionales RepID=Q1MS86_LAWIP Length = 360 Score = 110 bits (274), Expect = 8e-23, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 76/208 (36%), Gaps = 2/208 (0%) Query: 70 LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTML 129 + + + + + + L + +++ + + + + Sbjct: 14 VRKTMTAIHSYSKKYTESTQTSPEYLLKLAHEVLTIEMDGIETIRERLGNTFVEALLLLS 73 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYT 189 R+I+TG+G SGLV + A G A + + + + DL+L+IS + Sbjct: 74 SCKGRVIVTGVGKSGLVGRKIAATFSSTGTPAFFMHPVEGAHGDIGSLKSSDLILSISNS 133 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY--TIAEEQATNSASISACHA 247 G ELN + G ++A+T + L + A+ L+ E A ++ A Sbjct: 134 GETPELNAIVPTIKSFGTPMIALTSVLNSTLAKAANVVLHTEVPKEACPHGLAPTASTTA 193 Query: 248 QGMLTDLLFIALIQQDLELAPERIRHSE 275 L D + + L+ + +R+ Sbjct: 194 VLALGDAIAVCLMSLKSFTEKDFLRYHP 221 >UniRef50_A1VGM9 KpsF/GutQ family protein n=1 Tax=Desulfovibrio vulgaris DP4 RepID=A1VGM9_DESVV Length = 339 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 62/170 (36%), Gaps = 2/170 (1%) Query: 97 LVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMK 156 ++++ A+ + + RI +TG+G SG V + A L Sbjct: 29 NFAASVLQQEAHALTLLARGLDTSFCDAVDCLYGISGRIAVTGMGKSGHVGRKVAATLAS 88 Query: 157 IGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT 216 G A + A + +D +LA S +G EL+ R G ++ +T + Sbjct: 89 TGSPAYFIHPSEASHGDLGMLVSNDAVLAFSNSGNTAELSDIILYSARRGIPLIGVTRNS 148 Query: 217 PNALQQRASHCLYTI--AEEQATNSASISACHAQGMLTDLLFIALIQQDL 264 + L + ++H L E A ++ Q L D L + L+ Sbjct: 149 DSLLGKHSTHLLLLPLVPEADPLGCAPTTSTTLQMALGDALALTLMCHRG 198 >UniRef50_Q7MJB4 Transcriptional regulator n=3 Tax=Vibrio RepID=Q7MJB4_VIBVY Length = 308 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 89/249 (35%), Gaps = 8/249 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N ++ ++ Q L +S+ L +++ + + LA +A VS++++ ++ KLG+ Sbjct: 22 NTYRQLAEQLQSLTESEANLHAFIVGHFEELSYYGIIDLAQKAQVSKATIGRYLNKLGFT 81 Query: 62 GFPALKLALSEALASQPE--SPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ A K AL + L + + + ++ I + + Sbjct: 82 GYAAFKNALKQELITNNMVAPIEANKSKLFDQEIDTKTEAQRYIGNVAQLIDQFRQELNI 141 Query: 120 EKLHECVTML-RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQAS 177 E+L + + R I + G +S +A +F+ L N + D L + Sbjct: 142 EELDKLSQKIAEKNRTIYVVGPASSHSLALHFSTLLKYSRSNVVLLPLDKGELPKAMLGI 201 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 S +D+L+A SY + V +T N + ++ + Sbjct: 202 SEEDVLVAFSYYRFNPVVLDITKYFSSKCAFVAMVTNTHSNPYGIYSDVQFVLPSDVDSI 261 Query: 238 NSASISACH 246 + Sbjct: 262 ----FHSRT 266 >UniRef50_Q3Z924 Glucosamine--fructose-6-phosphate aminotransferase, isomerizing n=5 Tax=Dehalococcoides RepID=Q3Z924_DEHE1 Length = 593 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 30/208 (14%), Positives = 58/208 (27%), Gaps = 6/208 (2%) Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 P + K I E + TL + +L Sbjct: 219 RNGEYIIPRVEKINWTPDEAQKGGYSHYMLKEIHEQPQVIQNTLINMPLTESFYKSPLLE 278 Query: 131 SARRIILT--GIGASGLVAQNFAWKLM-KIGFNAAAVRDMHALLATVQASSPDDLLLAIS 187 R+ + G+S A + + + P L + +S Sbjct: 279 QGRKTGILFLACGSSYHAALTGRYLVEEHLNIPVRLEVASEFNYMQ--HLPPCKLAVVLS 336 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHA 247 +G ++ A + + G ++AIT + + A H +YT A A+ + A Sbjct: 337 QSGETADILRAMRRLKQAGCMIVAITNVAGSTAARLADHVIYTQA-GPEIGVAATKSFIA 395 Query: 248 QGMLTDLLFIALIQQDLELAPERIRHSE 275 Q ++ L A + + Sbjct: 396 QLVVLYALCFACASAASPRYQDYLSTMR 423 >UniRef50_C4ICI5 Transcriptional regulator, RpiR family n=2 Tax=Clostridium butyricum RepID=C4ICI5_CLOBU Length = 240 Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats. Identities = 37/227 (16%), Positives = 87/227 (38%), Gaps = 23/227 (10%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L+Q ++ + YL+ D + + +A + S S++++ A+KLGY GF L +L Sbjct: 12 KLSQIEETILTYLIENIDICINKGIRSIAKDNFTSPSTIIRLAKKLGYSGFVELMYSLKN 71 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 + L + + +N N N ++ + + ++ Sbjct: 72 ----------------KLSTETLDTFFDGINDKNI------FNTNYDKACEDFIECIKD- 108 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVR 192 I+++G G S +V++ KL+ +G + + + + + ++ +S +G Sbjct: 109 GNILISGEGFSEIVSKYMYMKLLVLGKKSILSTFIDFDILFDNHADTINSIILVSKSGEG 168 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 + K+++ TG + L + + E+ N Sbjct: 169 NHCVNSCIHAKERNLKIISFTGNVESTLAKNSDITFIIPDCEKMDND 215 >UniRef50_D1TFW4 Putative transcriptional regulator, RpiR family n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TFW4_9BURK Length = 302 Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats. Identities = 41/298 (13%), Positives = 83/298 (27%), Gaps = 24/298 (8%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + R+ L + K++A Y+L D ++ Q+A +AG S SV +F + +GY+ Sbjct: 5 FAQTVEARFAELTPTSKRVASYMLANLDRLGLETADQIAQQAGTSGISVGRFLRSVGYRN 64 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPL-----------------RLVGEKLIKE 105 LK L + D + ++ Sbjct: 65 LDDLKRELRGTQQRPWLITDRLDAFRRGPSDSTQAGEPHEPDVADGASPRDATLAQSLEL 124 Query: 106 NTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVR 165 A+ + + +A + + GI ++ ++ F L + Sbjct: 125 EIGAIQHVYELARSPAFARVAERIANADAVYILGIQSTRGISNAFYSYLEYLRPRVFYSD 184 Query: 166 DMHALLATVQASS-PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRA 224 M S L+ R G +T + Sbjct: 185 GMSGSYVDSLNSEFSTPYLIVTDTRAYSTIARRYCQAASRRGLPFALVTDIY-CPWARDF 243 Query: 225 S-HCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 L + + L +LL A++++ ER+ + L + Sbjct: 244 DGDLLQVKTDVGQFWD----SLAPLTCLFNLLISAVVERRGPAIDERVARNRELQSEF 297 >UniRef50_B0BZZ6 Sugar isomerase, KpsF/GutQ family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0BZZ6_ACAM1 Length = 334 Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 71/186 (38%), Gaps = 3/186 (1%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILT-GIGASGLVAQNFAW 152 +KL+ A+ + E++++ V ++ + ++ G+G SG+VA+ A Sbjct: 11 TFASQVDKLLLLEAEAIAKAADRLQPEQVNQAVDLMINCSGKVVLSGVGKSGIVARKIAA 70 Query: 153 KLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAI 212 L +G A + + AL + + D+++ +S +G EL + + ++A+ Sbjct: 71 TLTSVGVMAVFLHPVEALHGDLGIVATTDVVVVLSNSGETDELIAMLPCLKQRQVPLIAL 130 Query: 213 TGFTPNALQQRASHCL--YTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPER 270 G + L A L E N A ++ + D L + + Sbjct: 131 VGNVNSTLADEADVVLAATVDQEACPMNLAPTASTTVAIAIGDALAMTVTHAKGVTPEAF 190 Query: 271 IRHSEA 276 + A Sbjct: 191 AVNHPA 196 >UniRef50_Q89R61 Bll2911 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89R61_BRAJA Length = 290 Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 94/278 (33%), Gaps = 11/278 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L +R L +++ ++ A S + LA AG ++ + A+ +GY Sbjct: 8 SPLSELRIALPSLPMRLQEVGRFVAANDYDATTRSMRDLAAVAGADPAAFTRLAKAIGYS 67 Query: 62 GFPALKLAL--SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 G+ AL+ AL + + + + LV +KL+ E L Sbjct: 68 GWDALRAALTEARRPSQTSPFSGRAKSRRHGPHADVALVTDKLVAEAAG-----LPRIPA 122 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF-NAAAVRDMHALLATVQASS 178 + + E L A+RI + G + VA+ ++L V + A Sbjct: 123 QPIAEAAGALHDAKRIWIAGYRSCRSVAELLNYELRLFRPEQVQLVGASGPDDLDLGAFR 182 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 P + ++ I + A R G ++AI + + A H L A Sbjct: 183 PGEAVIVIGFLPYTHASVRVAQAAYRAGATLIAIADSVSAPMAEGADHVLLFEAASSP-- 240 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + + L A +R+ ++EA Sbjct: 241 -GFFPSLTGAIAIAQSLAAVTFSLGGIAAKKRLENTEA 277 >UniRef50_Q8EWN1 Transcriptional regulator n=1 Tax=Mycoplasma penetrans RepID=Q8EWN1_MYCPE Length = 281 Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats. Identities = 59/273 (21%), Positives = 119/273 (43%), Gaps = 9/273 (3%) Query: 9 QRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL 68 ++YQ L + +K L + P + ++ S+SS+ + +QK+G+K +KL Sbjct: 11 EKYQNLNEIEKDLLKKINENPIQFLDNNIIDISKSFYSSKSSISRLSQKIGFKHLSDMKL 70 Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTM 128 +S LA Q ++N + + L N A+ TL+ + + Sbjct: 71 YISGKLAMQD------LYNLDKEESNTESRIRNLRTYNIFAINETLSNINISDIKNICAN 124 Query: 129 LRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY 188 + +R++I G+G+S L AQ + ++K+G N+ ++ D+H LL + ++ DLL+ S Sbjct: 125 IIKSRKVICYGLGSSFLAAQELSQNMLKLGINSISINDIHNLLLALSSADKSDLLVLFSK 184 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 +G +E++ + + VL IT + R + + + + S+ Sbjct: 185 SGTNKEISYSIKVCNELNIDVLLITCNK--EVANRVKYKIIMEDIWKDKRLIATSSKTCM 242 Query: 249 GMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++DLL+ L E A + + L+ Sbjct: 243 LAISDLLYYELYYMT-ETADRNLEKANNLLNGW 274 >UniRef50_B9CKY1 Transcriptional regulator, RpiR family protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CKY1_9ACTN Length = 266 Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 104/270 (38%), Gaps = 19/270 (7%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ ++ + L ++ + + + P++ ++ A AGVSQS++ +F QK+GY Sbjct: 1 MDAFQQMSSNERKLTPTEHLIFEAITADPESFVQSTTTMAAQYAGVSQSAISRFCQKIGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 F ++ L +L++ + + + I+ + AT +E Sbjct: 61 DTFSEFRMDLMLSLSTHTPTQTASQE-------------KNPIEYLCNMVRATDISVKKE 107 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + + ++I TG G S A + +L+K ++ ++ + +PD Sbjct: 108 VFRNLTKRIIRSGKVITTGGGLSAPPALMLSMELLKYKIPCYFAQNGQEMIY-MHVVNPD 166 Query: 181 DLLLAISYTGVRRE-LNLAADEM-LRVGGKVLAITGFTPNALQQRASHCLYTI---AEEQ 235 DL++ S + L ++ V+ ++ + L++ A + E Sbjct: 167 DLIIIFSSKNDTQRLLINIIQDLPKNRRPYVVLVSHSATHPLKKYADDFILLPTWQTERY 226 Query: 236 ATNSASISACHAQGMLTDLLFIALIQQDLE 265 +++ A + L L ++D E Sbjct: 227 PVYIEPMTSMLAFCSIVMLSISKLSKKDPE 256 >UniRef50_A3ZL92 Putative uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZL92_9PLAN Length = 363 Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 71/188 (37%), Gaps = 2/188 (1%) Query: 90 RGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQN 149 + + G +I++ AA+ A +++ II+TG+G +GL+ Q Sbjct: 12 TPQEEVLRFGRTIIQQEAAALSAIAERLDARFGQALDLVMQCPGDIIVTGMGKAGLIGQK 71 Query: 150 FAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKV 209 A G + + A+ + D++LA S +G E+ + +G ++ Sbjct: 72 IAATFASTGTPSHFLHPAEAIHGDLGRVDEKDVVLAFSQSGETDEIVRLIPCLKSLGAQI 131 Query: 210 LAITGFTPNALQQRASHCLYTI--AEEQATNSASISACHAQGMLTDLLFIALIQQDLELA 267 +A+T N L + A L E A A ++ A L D L + + Sbjct: 132 VAVTANENNTLARAAKIVLPLGPIVEAGANRLAPSTSTAAMLALGDALALTCSWRRGFRP 191 Query: 268 PERIRHSE 275 + R+ Sbjct: 192 EDFARYHP 199 >UniRef50_A3K9H4 Putative uncharacterized protein n=1 Tax=Sagittula stellata E-37 RepID=A3K9H4_9RHOB Length = 275 Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 92/236 (38%), Gaps = 6/236 (2%) Query: 15 AQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEAL 74 + +++K+A L T + + LAN AGVS +V+++ KLG+ F + A+ + L Sbjct: 7 SGAERKVAAALSETFPTGALGTVEVLANRAGVSGPTVLRYVNKLGFSRFADFQAAVMQEL 66 Query: 75 ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR- 133 Q SP+V + D + + + A+ + + V +L + Sbjct: 67 DRQLGSPAVQMATPSEPQDGGEHLYRRTLLMQAEALRRVADRAVPAEFDRIVDLLTDPKL 126 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSPDDLLLAISYTGVR 192 I G S +AQ L ++ + + + + P DLL+ Y + Sbjct: 127 TIRALGGRYSRNLAQRLVLHLGQVRTQVSLIERPLGFAFDPLVDIGPRDLLVVFDYRRYQ 186 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 ++L A G +++ +T + + + + A L + E + ++ Sbjct: 187 QDLMAFAKAAWGQGARIVLLTDLSRSPVAELAEAVLISPDESPS----PFASRVVA 238 >UniRef50_A8TDJ4 Glucosamine--fructose-6-phosphate aminotransferase, isomerizing n=2 Tax=cellular organisms RepID=A8TDJ4_METVO Length = 629 Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats. Identities = 25/218 (11%), Positives = 70/218 (32%), Gaps = 8/218 (3%) Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 LK + S+ + +++++E + S+E++ + Sbjct: 257 LKNNCVKTNISKNILTLDWNIENAEKKGYEHFMLKEIMEEPEIIKNSIK--ISQEEIQKL 314 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 M+ +I + +G S + K+G + + L++ Sbjct: 315 AGMINDCDKIYVIAMGTSLHAGMIAEYWFSKLGKLV--IPCDSSEFLIKGIIDEKTLVVG 372 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 I+ +G + A G K ++ + + + + + + + Sbjct: 373 ITQSGETYDTIKAIKYAKNKGAKTASLVNVIGSTATRESDVTIMIGS-GLEISVCATKTF 431 Query: 246 HAQGMLTDLLFIAL---IQQDLELAPERIRHSEALVKK 280 +Q ++ LFI I +++E+ + + + K Sbjct: 432 MSQLVILYRLFIEYGKLINKNMEVYEKELEKIPKYISK 469 >UniRef50_A9EFQ3 SIS domain protein n=2 Tax=Rhodobacteraceae RepID=A9EFQ3_9RHOB Length = 282 Score = 108 bits (271), Expect = 1e-22, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 79/251 (31%), Gaps = 6/251 (2%) Query: 32 ARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRG 91 ++ +A VS+++V +F + +GY F LK L + P S + + Sbjct: 8 LPFETAASIARSVKVSEATVGRFCRSIGYDSFRDLKDHLKHDMGDDPWLMSDRLQEMRKD 67 Query: 92 DDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFA 151 + ++ AA+ + + + + L + + G +AQ FA Sbjct: 68 GGVDSAQLNQGLQLEIAALVGIYELANSAEWQQEAERLAQTAHVFVAGFQTERGLAQYFA 127 Query: 152 WKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLA 211 ++ + + A + + L+ A+E G V Sbjct: 128 NQMQYVRDGVTLIDLAAGNFAEILLTDRPAHLVIFEARRYSVLAKSLAEEARAAGVTVTL 187 Query: 212 ITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGM-LTDLLFIALIQQDLELAPER 270 IT + + A + + AQ L++LL ++ Q R Sbjct: 188 ITDVFCDWGHEAADQVFAVPTQFNQFWDS-----TAQMASLSNLLIHSVFLQLGSEVEGR 242 Query: 271 IRHSEALVKKL 281 + L + Sbjct: 243 LNRIADLYGRF 253 >UniRef50_C7TGG9 Phosphosugar isomerase n=4 Tax=Lactobacillus RepID=C7TGG9_LACRL Length = 203 Score = 108 bits (271), Expect = 1e-22, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 67/183 (36%), Gaps = 3/183 (1%) Query: 91 GDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS-ARRIILTGIGASGLVAQN 149 + + ++ AAM + ++ + + + R++ G+G +G + Sbjct: 1 MKENKLDLVHTYMQREIAAMQLIESQINDVQYCSVIDKIMHLTGRLVFMGVGKTGHIGVK 60 Query: 150 FAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKV 209 A +G A V A+ + + +DL++ IS +G +E + R+G Sbjct: 61 LAATFASLGTPAIFVHATEAMHGDMGMITSEDLVILISNSGETKETLAPLPSLKRIGAAT 120 Query: 210 LAITGFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDLELA 267 +A TG + L Q L E A S+ A M+ D L + + A Sbjct: 121 VAFTGQDDSHLAQACESVLTIPVTHEADDLGLAPTSSSTAALMVGDALACTISRLKGFTA 180 Query: 268 PER 270 + Sbjct: 181 SDF 183 >UniRef50_Q14NM0 Hypothetical transmembrane protein n=1 Tax=Spiroplasma citri RepID=Q14NM0_SPICI Length = 280 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 48/285 (16%), Positives = 110/285 (38%), Gaps = 17/285 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M + + L +L + L + L+ +LA+ ++ S++ + +KLG+ Sbjct: 1 MKIIT--YDKENQLTDLQIQLIEKLNNDIQSVLELTINELADNLFINTSTLSRLIKKLGF 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + + K+ ++ + + L + + + K NT A+ T Sbjct: 59 ENYSKFKVWVAGKYNNIKKFDIQENET------TLHNIIDNIYKLNTYALDETYRNLKVN 112 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L + + + + RI++ GI L+ +N L + +N+ + + +A + ++ S + Sbjct: 113 QLEKIIDTIHDSERIVIWGISRHTLICENLNLHLNVLKYNSTYLVNYYATIQLIETLSEN 172 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNA----LQQRASHCLYTIAEEQA 236 DLL+ IS + E + D + K++ +T LQ+ L E Sbjct: 173 DLLILISKSLQDAEYHFLIDIATKRNVKIILLTINKEYKGPPNLQK-----LTLENTEIL 227 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++ ML +++F LI + E + + + Sbjct: 228 NFYVDNPHYVSRLMLINIVFGMLIAKYHPTHNEEYKDYYTAIDEW 272 >UniRef50_A6CXK8 D-arabinose 5-phosphate isomerase n=1 Tax=Vibrio shilonii AK1 RepID=A6CXK8_9VIBR Length = 323 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 68/191 (35%), Gaps = 2/191 (1%) Query: 88 QIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVA 147 + ++I A L + ++ +II++GIG SG + Sbjct: 1 MQVVKTEVIEYATQVINAEIAEAQKLLGRLEDNFAQAVSHIVNCQSKIIVSGIGKSGHIG 60 Query: 148 QNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGG 207 + A L G A V AL + + DL++ IS +G E + G Sbjct: 61 KKMAATLASTGSPAFFVHPAEALHGDLGMITKGDLVILISNSGESAEFKTMLPILKERGI 120 Query: 208 KVLAITGFTPNALQQRASHC--LYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLE 265 ++ +TG T + L Q + + +E A S+ ++ D L I ++ Sbjct: 121 SIIGMTGNTSSHLAQNSDCVVNIAIDSEACPLGLAPTSSAVNTLIMGDALAITAMKIRKF 180 Query: 266 LAPERIRHSEA 276 + + + A Sbjct: 181 DSIDFAQSHPA 191 >UniRef50_B0PES3 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PES3_9FIRM Length = 209 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 70/181 (38%), Gaps = 2/181 (1%) Query: 92 DDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFA 151 D+ + ++ I++ + A+ + E C +L R+I+TG+G +G + + A Sbjct: 6 DEKIIDFCKEQIQKESDALLRVKSQVDEAYAQACRAILDCKGRVIVTGLGKTGHIGKKIA 65 Query: 152 WKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLA 211 + +G A V L + + DDL++ IS +G E+ + +G K ++ Sbjct: 66 ATMASLGIPAFFVHSCETLHGDMGMITKDDLVIMISNSGKSSEILNMLAPLKIIGAKTIS 125 Query: 212 ITGFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDLELAPE 269 IT + L + + A E A ++ + D L + + Sbjct: 126 ITKDKHSPLAEATDIKILCDAGPEIDHMGLAPTASSTGALAIGDALATVVCKMRGFTKQN 185 Query: 270 R 270 Sbjct: 186 F 186 >UniRef50_A8GDB9 Transcriptional regulator, RpiR family n=1 Tax=Serratia proteamaculans 568 RepID=A8GDB9_SERP5 Length = 237 Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 82/230 (35%), Gaps = 30/230 (13%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN Q L+++D + + +L PD + L+ S S+VV+ A+KLG+ Sbjct: 1 MNFKQVFSQA--DLSKTDLAILNCILDNPDACIDEGIRALSARCYSSPSTVVRLAKKLGF 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 +G+ L + LA P + L++ E Sbjct: 59 RGYLELVYFIKFNLAMAPAYLAEKSAPVAVS---------------VQQQAQFLDLLDEG 103 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 K+ ++ G G S LVAQ K M +G ++ + + Sbjct: 104 KI-------------LIHGSGFSQLVAQYMYNKFMTLGIDSYLSLWPDFDILDRETRFRF 150 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT 230 ++++ IS +G ++ + R ++ A G + L Q+A Sbjct: 151 NMVIVISKSGNSGSALNWSEAVKRNDIRLAAFCGDGDSPLAQQADMSFIY 200 >UniRef50_A8IPW3 Sugar isomerase n=58 Tax=Bacteria RepID=A8IPW3_AZOC5 Length = 354 Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats. Identities = 48/203 (23%), Positives = 79/203 (38%), Gaps = 2/203 (0%) Query: 70 LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTML 129 L+ A + + + E A + A N E T+L Sbjct: 16 LAMTAAPSTKVDTSVTETRSPAIASALSTLETEAAGLAALIAAVGNGLGEAFEAAVATIL 75 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYT 189 + R+I+TG+G SG VA+ A L G A V A + +P+D+++ +S++ Sbjct: 76 GAKGRVIVTGMGKSGHVARKIAATLASTGTPAHYVHPAEASHGDLGMVAPEDVIIGLSWS 135 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI--AEEQATNSASISACHA 247 G EL D LR ++AIT +AL + A L E A ++ Sbjct: 136 GETAELRDIVDYALRFDVPLIAITSNRESALARAARVVLALPLSPEACPLGLAPTTSTLM 195 Query: 248 QGMLTDLLFIALIQQDLELAPER 270 Q + D L +AL++ A + Sbjct: 196 QLAMGDALAVALLESRGFTAKDF 218 >UniRef50_A3PT11 Transcriptional regulator, RpiR family n=4 Tax=Mycobacterium RepID=A3PT11_MYCSJ Length = 287 Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats. Identities = 54/264 (20%), Positives = 101/264 (38%), Gaps = 7/264 (2%) Query: 15 AQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEAL 74 +++++++ LL +A S+ +LA A VS +V++FA LG++GF L+++L + Sbjct: 21 SRAERRVGRALLADYPSAGLASAARLAERADVSPPTVLRFAHSLGFEGFADLQVSLRAEI 80 Query: 75 ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARR 134 ++ P + + PL + + + TL L V +L R Sbjct: 81 SAMSSGPITRLPDAPAAGSPLDRLLNQ-ARAQNDRALETLAHLPGSSLEAAVALLADQTR 139 Query: 135 IILT-GIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA-SSPDDLLLAISYTGVR 192 + G S L+AQ+ L ++ + D + D+L+ Y + Sbjct: 140 PLFLHGGRFSVLLAQHLGAHLEQLRPGVRLLADPSGRDLGAMMELTRRDVLVLFDYHRYQ 199 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLT 252 A R G V+ IT + A L + + A +LT Sbjct: 200 ASAVDVAARFHRAGAAVVLITDDLACPVAPDAEVVLAASSTV----GTVYQSMAAGFLLT 255 Query: 253 DLLFIALIQQDLELAPERIRHSEA 276 +LL +++ E A R+ E Sbjct: 256 ELLLPLVMEAIGEPARTRMALWEE 279 >UniRef50_Q06210 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 1 n=147 Tax=cellular organisms RepID=GFPT1_HUMAN Length = 699 Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats. Identities = 37/291 (12%), Positives = 89/291 (30%), Gaps = 38/291 (13%) Query: 14 LAQSDKKLADY--------LLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPA 65 L ++K +Y ++ + L +A + S+ + + G Sbjct: 265 LFPVEEKAVEYYFASDASAVIEHTNRVIFLEDDDVAAVVD-GRLSIHRIKRTAGD----- 318 Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLN--------VN 117 ++ + Q +K I E ++ T+ Sbjct: 319 ---------HPGRAVQTLQMELQQIMKGNFSSFMQKEIFEQPESVVNTMRGRVNFDDYTV 369 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 + L + + ++ RR+IL G S L ++ V L Sbjct: 370 NLGGLKDHIKEIQRCRRLILIACGTSYHAGVATRQVLEELTELPVMVELASDFLDRNTPV 429 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 DD+ +S +G + + G + IT +++ + ++ A Sbjct: 430 FRDDVCFFLSQSGETADTLMGLRYCKERGALTVGITNTVGSSISRETDCGVHINA-GPEI 488 Query: 238 NSASISACHAQGMLTDLLFIAL------IQQDLELAPERIRHSEALVKKLV 282 AS A +Q + + + + +Q+ + ++ L+K+++ Sbjct: 489 GVASTKAYTSQFVSLVMFALMMCDDRISMQERRKEIMLGLKRLPDLIKEVL 539 >UniRef50_B0VH11 Carbohydrate isomerase, KpsF/GutQ family n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VH11_9BACT Length = 322 Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats. Identities = 28/182 (15%), Positives = 71/182 (39%), Gaps = 3/182 (1%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILT-GIGASGLVAQNFAW 152 + ++ + + A+ S+E L + +L + ++ G+G +G++A+ + Sbjct: 2 NIYETVQEELAKEATAIQKVAKQLSKESLEKAFDLLCKCKGKVVLTGMGKTGIIARKISA 61 Query: 153 KLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAI 212 L G + + + + D+++A+S +G +EL + ++AI Sbjct: 62 TLASTGTTSIFLHAAEGIHGDLGMIESGDVVIAVSNSGNTQELINLIPFLKFNYVPIIAI 121 Query: 213 TGFTPNALQQRASHCLYTIAEE--QATNSASISACHAQGMLTDLLFIALIQQDLELAPER 270 TG + L + + L + + ++ + D L IAL++ + Sbjct: 122 TGEPNSQLAKNSDVVLNCHIPKELEPLGLVPTASTTVALAVGDALAIALLKHKNFQLKDL 181 Query: 271 IR 272 + Sbjct: 182 AK 183 >UniRef50_Q58815 Mja gf6p intein n=17 Tax=cellular organisms RepID=GLMS_METJA Length = 1099 Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats. Identities = 29/229 (12%), Positives = 69/229 (30%), Gaps = 9/229 (3%) Query: 57 KLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNV 116 K G+ + + + + + + ++++++ + Sbjct: 721 KKKENGY-EVTIENNGNTVEREMMEINWDISSAEKMGYPHFMLKEIMEQP--EVLKVSAK 777 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA 176 S E++ E ++ R+ +G S A + K+G A L Sbjct: 778 ISAEEIKELAKCIKDYDRVYFVAMGTSLHAAMVVEYLFAKLGKLVIACDASEFLN--KGV 835 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 L++ I+ +G + A + K AI + + A + A Sbjct: 836 VDDKTLVIGITQSGETYDTLKALRFAKKNKAKTGAIVNVLGSTATREADITVMMGA-GIE 894 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLE---LAPERIRHSEALVKKLV 282 + +Q M+ LFI + + I +K+++ Sbjct: 895 IAVCATKTYTSQLMILYRLFIEYGKLLGRDMSEYEKEIDKIPNYIKEVL 943 >UniRef50_Q2LUX9 Arabinose-5-phosphate isomerase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LUX9_SYNAS Length = 336 Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 39/191 (20%), Positives = 77/191 (40%), Gaps = 2/191 (1%) Query: 84 PIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGAS 143 Q D + E++++ ++ + + RS R+I+TGIG S Sbjct: 1 MTRQQNMQKDQTIVRAEEVLRIEAESILQLIGRLDGNFSRAVDIIYRSPGRVIVTGIGKS 60 Query: 144 GLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEML 203 GL+ + + G A + + L + + DD+LLAIS +G E+N + Sbjct: 61 GLIGKKIVATMTSTGTQALFLHPVEGLHGDLGIVTKDDVLLAISNSGETEEVNRLISSVQ 120 Query: 204 RVGGKVLAITGFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQ 261 ++G +++ TG + + + + + E A S+ A + D L +ALI Sbjct: 121 KIGTPLISFTGNPSSTMARASDAVIDVGVEREACPFGLAPTSSSTATLAMGDALAVALID 180 Query: 262 QDLELAPERIR 272 + + + Sbjct: 181 KHKFSEKDFYK 191 >UniRef50_D1AIY1 KpsF/GutQ family protein n=11 Tax=Fusobacteriaceae RepID=D1AIY1_SEBTE Length = 319 Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 73/180 (40%), Gaps = 2/180 (1%) Query: 93 DPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAW 152 D +++ + + + E + S+ ++++TGIG SG + + + Sbjct: 2 DKSLTEAKRVFEAEIEELVKVKDRLDENFSKMVDMIYESSGKVVITGIGKSGHIGKKISA 61 Query: 153 KLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAI 212 L G N+ + AL + D++LAIS +G E++ + R+G ++A Sbjct: 62 TLASTGTNSVFINAAEALHGDLGVIKKGDIVLAISNSGNSDEISNILPSVRRIGADIIAF 121 Query: 213 TGFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDLELAPER 270 TG +AL + A + E A +++ ++ D L AL+Q+ Sbjct: 122 TGNKISALGKEADLIINIAIDKEACPMGLAPMTSATVTLVMGDALAAALMQKRDFKPENY 181 >UniRef50_B2JHA3 Transcriptional regulator, RpiR family n=5 Tax=Burkholderiaceae RepID=B2JHA3_BURP8 Length = 335 Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 49/275 (17%), Positives = 93/275 (33%), Gaps = 18/275 (6%) Query: 21 LADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPES 80 + LL QP+ + LA V+ S++ + KLGY GF + ++LA + Sbjct: 60 VLAKLLEQPEEVAVRTITDLATALDVNASTLTRLCTKLGYAGFADFQSVFRDSLAHRHRH 119 Query: 81 PSVPIHNQIRGD-------------DPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 ++ P V +L E+ + L S + L Sbjct: 120 FYTHQAQRLVAGKAARMQMSGRGGASPEIDVVAQLAHESIGNVETFLGRLSPDDLRGAAA 179 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSPDDLLLAI 186 +L A R+ + + +A + L I + A + + + P D+++ Sbjct: 180 LLADAPRVRVHALRQFSSLASFLCYGLGMIRTDVALLDAQGLGVAEGLAQLQPGDVVVVS 239 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S R + A G V+AIT + L A H E + ++ Sbjct: 240 SVAPYTRSVAETAAAAAEAGMTVIAITDTLASPLVPPARHAFLIPHESSFFS----NSMG 295 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 A + + L + + + + + E L+ L Sbjct: 296 AYLIFCEGLLNLVATHLGKRSLQALSRRERLITAL 330 >UniRef50_D1YX72 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Methanocella paludicola SANAE RepID=D1YX72_METPS Length = 608 Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 36/248 (14%), Positives = 81/248 (32%), Gaps = 11/248 (4%) Query: 27 LQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIH 86 +L + + G ++ ++ H Sbjct: 197 KHTKQVLYLKDGDIGIITKSG-------VYISDFNGIRVVRTPQVMEWNTEEAGVCGYAH 249 Query: 87 NQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLV 146 ++ + + L + + A +L + +RII+ G S Sbjct: 250 YMLK---EIHEQPKSLNDAMISRVDALKGTIDLPELGLTKEQVNQFKRIIIVACGTSYHA 306 Query: 147 AQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVG 206 + + ++ +V + + D L++AIS +G + A + ++ G Sbjct: 307 GLLGKYAIERLTDLPVSVEIGSEFRYAARRLTQDALIIAISQSGETADTIAAVKDAVQKG 366 Query: 207 GKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLEL 266 V+AIT + + + A +Y A A+ +Q M+ LL + L +Q + Sbjct: 367 IHVIAITNVFGSTITREAPSTIYMHA-GPEIGVAATKTFTSQVMILYLLALYLSKQRDTV 425 Query: 267 APERIRHS 274 AP+ ++ Sbjct: 426 APQELKQM 433 >UniRef50_C2FAJ3 RpiR family transcriptional regulator n=1 Tax=Lactobacillus paracasei subsp. paracasei ATCC 25302 RepID=C2FAJ3_LACPA Length = 252 Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 52/263 (19%), Positives = 109/263 (41%), Gaps = 17/263 (6%) Query: 1 MN-GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 MN +I + Y+ L+ +++ + D+++ L + + + VS ++V++ A+KLG Sbjct: 1 MNTFFEQIARHYETLSSNEQLVIDFVMRD-HNIDRLKIKTITDALFVSSATVMRAARKLG 59 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 Y F LK + + Q + + T+ TL + SE Sbjct: 60 YSNFSQLKYSAAMTQDEQAAPL-------------PSEDFDTITGRITSEFDKTLQMLSE 106 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 E + E V L ARRI G G+S V +F KL + + +++++ + Sbjct: 107 ENVAEFVEHLNHARRIFCVGSGSSVSVVGDFTRKLKLLDYWINDFNELYSIRDIAGLAEA 166 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DD+++ +S G +N G K+++ITG +++ + + + E Sbjct: 167 DDVIVILSLGGGNHLVNQFLVRAKATGAKIISITGIGADSVAKFSDCNILVYQEAVP--R 224 Query: 240 ASISACHAQGMLTDLLFIALIQQ 262 + + + D++F ++ Sbjct: 225 KRMRSRLMLNVAIDIIFEYILSH 247 >UniRef50_Q0RUQ9 Possible 6-phospho-3-hexuloisomerase n=3 Tax=Rhodococcus RepID=Q0RUQ9_RHOSR Length = 193 Score = 107 bits (268), Expect = 3e-22, Method: Composition-based stats. Identities = 49/181 (27%), Positives = 77/181 (42%), Gaps = 12/181 (6%) Query: 104 KENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAA 163 + LN + E+ +++ SAR + + G G SGL Q A +LM +G Sbjct: 17 RIVLDENERLLNSVAAEQWDRAGSLITSARAVFVIGNGRSGLAVQMAAMRLMHLGLRVHV 76 Query: 164 VRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQR 223 + T A DLL+A+S +G + AAD +VG VLA+T + L +R Sbjct: 77 AGE-----VTAPAIGDGDLLIAVSGSGTTASVVGAADTANKVGASVLAVTTAPDSPLARR 131 Query: 224 ASHCLYTIAEEQATNSASISACHA-------QGMLTDLLFIALIQQDLELAPERIRHSEA 276 A L A ++ +SA+I+A +A + D LF AL + A Sbjct: 132 ADEVLILPAADKQDHSAAITAQYAGSLFEQSVLLAFDALFQALWHNVDQTAERLWERHAN 191 Query: 277 L 277 + Sbjct: 192 I 192 >UniRef50_B3QSH3 KpsF/GutQ family protein n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QSH3_CHLT3 Length = 333 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 37/173 (21%), Positives = 75/173 (43%), Gaps = 2/173 (1%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWK 153 + + + + A+ A E+ +L + ++I+TG+G SG++AQ A Sbjct: 15 NFIDLARQTLLLESKALEAVSTRLDEQFNAAVRLILNATGKVIITGMGKSGIIAQKIAAT 74 Query: 154 LMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 + G A + A + S D+++ +S +G EL + ++ +++A+ Sbjct: 75 MTSTGTPAVFMHPSEAAHGDLGVVSKGDVVIGLSKSGTTEELLYILPALKQLQVQIIAMV 134 Query: 214 GFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQDL 264 G +AL RA L E++ + A ++ A + D L +AL+Q Sbjct: 135 GNVRSALALRADAVLDVAVEKEACPYDLAPTTSTTAMLAMGDALAMALMQAKK 187 >UniRef50_A5VEU9 KpsF/GutQ family protein n=2 Tax=Sphingomonas wittichii RW1 RepID=A5VEU9_SPHWW Length = 334 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 66/178 (37%), Gaps = 3/178 (1%) Query: 100 EKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF 159 +++ A+ + E+ +L + R++++G+G SG +A+ A G Sbjct: 24 REVLGVEAQALTLQRDALDEDFARAVELILATQGRVVVSGMGKSGHIARKMAATFASTGT 83 Query: 160 NAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNA 219 A V A + DLL+ +S +G EL +G ++AI+ + Sbjct: 84 PAIFVHPGEAAHGDLGMLLAGDLLVVLSNSGATPELGPIMTYARDLGCPIVAISAQRHSP 143 Query: 220 LQQRASHCLYTI--AEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 + + AS + E N + ++ L D L +A + + + Sbjct: 144 MARLASAAIILPKVRETCPVNISPTTSTTLMLALGDALAVATMSMRG-ITRAELERLH 200 >UniRef50_D1S1T7 Transcriptional regulator, RpiR family n=3 Tax=Actinomycetales RepID=D1S1T7_9ACTO Length = 281 Score = 107 bits (267), Expect = 5e-22, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 97/267 (36%), Gaps = 20/267 (7%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L + +++A L+ A +LS+ ++A AGVSQ SV +FA LG+ G+PAL+ L E Sbjct: 20 RLTPTQRRIAHCLVRHAGAAAYLSAAEVAELAGVSQPSVTRFAMALGHDGYPALRRRLRE 79 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN-SEEKLHECVTMLRS 131 + P+ ++ + + ++ E +L + Sbjct: 80 LTVTGSAGPAAGNA------------LQRAVHAERDNLDRLAAQLADAGRVAEVGKLLAA 127 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHAL---LATVQASSPDDLLLAISY 188 +R + + G+ A+ +A FA+ K+ + + D ++ ++ +LA Sbjct: 128 SRPLPVLGLRAAAPLAAYFAYFAAKVHPDVRVLDDGGSMLVDRLDQAVAAGATAMLAFVL 187 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 RE A E G V+AIT + + A L + Sbjct: 188 PRYPRETLDALREARDAGLTVVAITDSPVSPATEHAEVVLPAAVGADLVFDLHTAPMTLA 247 Query: 249 GMLTDLLFIALIQQDLELAPERIRHSE 275 ++ + A R+ E Sbjct: 248 MVVLQAICDA----APAETQNRLEAFE 270 >UniRef50_Q1IST9 KpsF/GutQ family protein n=5 Tax=Bacteria RepID=Q1IST9_ACIBL Length = 338 Score = 107 bits (267), Expect = 5e-22, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 65/184 (35%), Gaps = 13/184 (7%) Query: 100 EKLIKENTAAMYATLNVN---SEEKLHECVTMLRSARRIILT-GIGASGLVAQNFAWKLM 155 E +++ A+ + V +L ++ G+G SGL+ + A Sbjct: 16 ENVVRIEAEALRELADRIAGPMAADFQRAVDLLACCGGRVVVSGMGKSGLIGRKMAATFS 75 Query: 156 KIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGF 215 G A + A+ + + D+++A+S +G E+ + R+G V+ +T Sbjct: 76 STGAPALFLHPAEAMHGDLGMIARGDVVIALSASGETEEILNLLPTIKRLGAPVITMTCD 135 Query: 216 -------TPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDLEL 266 + L Q A L E A ++ L D L +AL ++ Sbjct: 136 NLYANGAKRSTLAQAADVALDCSIAQEACTLGLAPTASTTTMLALGDALAMALAEKRGFK 195 Query: 267 APER 270 + Sbjct: 196 EEDF 199 >UniRef50_D0LJS5 KpsF/GutQ family protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LJS5_HALO1 Length = 334 Score = 106 bits (266), Expect = 6e-22, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 66/183 (36%), Gaps = 2/183 (1%) Query: 84 PIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGAS 143 + D ++ +E AA+ + + +++ G+G S Sbjct: 13 HASPNLESRDARVEQAREVFREQAAAIADLGQRIDASFTRAIELLRTTPGHVVICGMGKS 72 Query: 144 GLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEML 203 GL+ Q A L G + V A + + + ++ +SY+G E+ + Sbjct: 73 GLIGQKIAATLASTGTPSFFVHPAEAYHGDLGMITAQNTVMLLSYSGETEEVVRLLPHLQ 132 Query: 204 RVGGKVLAITGFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQ 261 R+ ++ + G + L ++ L E N A S+ A + D L ++LI Sbjct: 133 RMRVPLIGLVGRLDSTLARQVDVALDVSVEREACPNNLAPTSSTLAALAMGDALAVSLIH 192 Query: 262 QDL 264 + Sbjct: 193 ERK 195 >UniRef50_B1C072 Putative uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=B1C072_9FIRM Length = 605 Score = 106 bits (266), Expect = 7e-22, Method: Composition-based stats. Identities = 30/209 (14%), Positives = 64/209 (30%), Gaps = 8/209 (3%) Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNV-------NSEEKLH 123 E + + +P N+ K I E + TL +L Sbjct: 224 QEGIEISKKPTHIPYDNESAKKGGYDTFMLKEIHEQPYVISETLRGRIKDNDCIVLPELD 283 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 + ++ R+ G + + A + ++ ++ + L Sbjct: 284 QLKEKFKTFNRVYFVACGTAYHACLSGANVMERLTKLPTFIQVASEFRYSNPIIDDKTLC 343 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 + +S +G + A G +AI + + + A+ +YT A AS Sbjct: 344 IFVSQSGETADTLAALRLAKAKGCTTIAIANVLGSTISREAAATIYTCA-GPEIAVASTK 402 Query: 244 ACHAQGMLTDLLFIALIQQDLELAPERIR 272 A Q ++ LL + + Q + + Sbjct: 403 AYTTQIIVLLLLAMYIAQSLGKEDEDYRE 431 >UniRef50_A5EVJ8 Arabinose 5-phosphate isomerase n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EVJ8_DICNV Length = 320 Score = 106 bits (265), Expect = 8e-22, Method: Composition-based stats. Identities = 36/159 (22%), Positives = 58/159 (36%), Gaps = 3/159 (1%) Query: 120 EKLHECVTMLRSARRIILT-GIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 + L R ++ G+G SG +A A G A V A + + Sbjct: 28 DDFGRACETLMKTRGHVIVSGMGKSGHIAAKLAATFASTGTPAFFVHPSEAGHGDLGMIT 87 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA--EEQA 236 D LL +S++G EL + + V+A+TG + L Q A + E Sbjct: 88 AADTLLMLSFSGESGELLAMLPALKTLAVPVIAMTGNPQSHLAQNADIHIPIHIEREACP 147 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 N A ++ A + D L I+L+Q + R Sbjct: 148 LNLAPTASTTAMLAVGDALAISLMQARDFNDEDFARSHP 186 >UniRef50_A1RWB5 Glutamine--fructose-6-phosphate transaminase n=11 Tax=Thermoprotei RepID=A1RWB5_THEPD Length = 613 Score = 106 bits (265), Expect = 8e-22, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 70/206 (33%), Gaps = 9/206 (4%) Query: 84 PIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGAS 143 P ++ + K I E + T+ +L A I + G S Sbjct: 250 PWTAELARKEGFPHYMLKEIHEQPRVIAETIRGF-GPDYERGAELLSDAEVIYVVASGTS 308 Query: 144 GLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEML 203 + FA MKI V ++S D LLA+S +G + +A Sbjct: 309 YHASLYFALLTMKIAGKKVIPLISSEYAGYVSSASERDALLAVSQSGETIDTLMAMRAFK 368 Query: 204 RVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALI--- 260 G + +++T + + + + H +Y A A+ Q L + Sbjct: 369 ERGVRTVSLTNVIGSVISRESDHQVYMKA-GPEIGVAATKTFTVQLTALTWLSALIARNV 427 Query: 261 ----QQDLELAPERIRHSEALVKKLV 282 ++D E ER++ L +K++ Sbjct: 428 GAMDEKDAESLLERMKKIPDLAEKVI 453 >UniRef50_Q1QYQ3 Transcriptional regulator, RpiR family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QYQ3_CHRSD Length = 286 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 50/281 (17%), Positives = 98/281 (34%), Gaps = 11/281 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + GL+ +++ L L + + LA ++GVS ++V +F ++LGYKG Sbjct: 10 LAKEVDALKGGLSPAERALYSTLQANLENLAFETGASLAQKSGVSPNTVSRFMRRLGYKG 69 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 LK AL L S + I + L + A+ A + + Sbjct: 70 LSGLKSALRNELRSNSLLNATLIERVAQQPADLTT----HLNAEIEALKAFAEQLTGQHW 125 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP-DD 181 + V + A R+ + G +AQ+FA +L + + +L S Sbjct: 126 QDIVQRVSDAERVFVCGFQTVRGLAQDFANRLALVRPGVEFIDLYSGVLGQWMDSQDVRC 185 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASH-CLYTIAEEQATNSA 240 ++ I T A+ L ++ + + + + ++ E Sbjct: 186 CVILIDITPYAEAGITFANHCLAHDADLVVFSDEYG--IARYIDTPHIISMTTETGLILE 243 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S + ++L + E ER+ A V++L Sbjct: 244 STGGLTSAL---NVLLHCVAADHKEELRERMEAYRARVQQL 281 >UniRef50_C7NES0 KpsF/GutQ family protein n=6 Tax=Fusobacteriaceae RepID=C7NES0_LEPBD Length = 325 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 68/169 (40%), Gaps = 5/169 (2%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILT--GIGASGLVAQNFAWKLMK 156 + + + N + + V + + + GIG SG++ + A L Sbjct: 9 AKSVFDIEITELEKLKNRI-GDSFQKLVNTIMELKNNKVVVTGIGKSGIIGEKIAATLAS 67 Query: 157 IGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT 216 G A + AL + S D+++AIS +G E+ + ++GGK++ TG Sbjct: 68 TGTTAVFLNAAEALHGDLGIISNGDVVIAISNSGNSDEILSILSPIRKIGGKIVGFTGNP 127 Query: 217 PNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQD 263 + L + A + E++ A +S+ + + D L + L++ Sbjct: 128 NSTLGKYADITINVGVEKEACPLGQAPMSSTTSTLVTGDALAVCLMKLK 176 >UniRef50_A4NYS2 N-acetylneuraminate lyase n=2 Tax=Haemophilus influenzae RepID=A4NYS2_HAEIN Length = 148 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 44/135 (32%), Positives = 71/135 (52%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 N L +I YQ L +S+KK+AD +L PD S ++A V ++++V+F + +G+K Sbjct: 6 NVLNKIGSLYQSLTKSEKKIADTILRSPDLVSQCSLSEIAKHLQVGEATLVRFCRTIGFK 65 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF KL LS LA++ + +I D + +KL M T+N+ ++ Sbjct: 66 GFSEFKLELSIELATKDNQDESILETEIMPSDDSLTIAQKLQTAVANVMEETINLLDLKQ 125 Query: 122 LHECVTMLRSARRII 136 L E V +L+ ARRI Sbjct: 126 LEEVVKVLKKARRIF 140 >UniRef50_C3MFV3 Sugar isomerase, KpsF/GutQ family protein n=8 Tax=Rhizobiaceae RepID=C3MFV3_RHISN Length = 336 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 67/167 (40%), Gaps = 2/167 (1%) Query: 107 TAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD 166 A AT ++ + + R++++G+G SG + + A L G +A V Sbjct: 34 LAEHLATDESFAQSLVEAVELVGDGHGRVVVSGVGKSGHIGRKIAATLASTGTSAYFVHP 93 Query: 167 MHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASH 226 A + + DD+L+ +S++G EL R +++I+ + L + + Sbjct: 94 TEASHGDLGMVTSDDVLILLSWSGETAELANMLTYAKRFKVPIVSISSNRDSILARNSEI 153 Query: 227 CLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERI 271 L E A ++ Q + D L IAL+++ A + Sbjct: 154 ALVLPKVPEACPHGLAPTTSAMLQLAVGDALAIALLERRGFSAEDFK 200 >UniRef50_B9KGQ0 Glucosamine--fructose-6-phosphate aminotransferase (GlmS) n=11 Tax=Rickettsiales RepID=B9KGQ0_ANAMF Length = 608 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 33/221 (14%), Positives = 68/221 (30%), Gaps = 4/221 (1%) Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE- 120 +K+ A E+ + + P K I E + T++ Sbjct: 220 SLNDVKIYNESDEALDYETILISAPSTSTDKAPYEHFMLKEIHEQPKVIRDTIDQFISYG 279 Query: 121 --KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 + + +S + + G G+S + + L I + S Sbjct: 280 SVEFACNADLFKSLTHLTIVGSGSSYMAGLIAKYWLESIANIRVLLSIASEFRYHRMQIS 339 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 +D+ L IS +G + A R V+++T N+++ + L +A Sbjct: 340 ENDVFLFISQSGETADTLAALRHARRQHSTVISLTNVPRNSMESISDIALKILA-GPEVG 398 Query: 239 SASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVK 279 AS AQ + + L + +A ++ Sbjct: 399 VASTKTFSAQLAVLACFSLWLAKVRCVIAQSTYEQLLEALQ 439 >UniRef50_A6M3E6 Transcriptional regulator, RpiR family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M3E6_CLOB8 Length = 252 Score = 105 bits (263), Expect = 1e-21, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 93/273 (34%), Gaps = 26/273 (9%) Query: 1 MNG-LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M L +I + ++++ +Y++ D+ L + +A E S S++++ ++KLG Sbjct: 1 MKVDLSKIVNNK-KITPIEEQVLEYIINNIDSVMDLGVRGVAAENYTSTSTIMRLSKKLG 59 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 + GF + + D + E+ + E Sbjct: 60 FTGFIDMIYNI-----------------TPLIDGGGTGIIEESEALIGTDIKFLSKYTDE 102 Query: 120 EKLHECVTMLRSA--RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 E + + +L S + I + G S + + F KL+ +G + + + Sbjct: 103 ENVKRFIEILASGTKKYIFIYARGYSEITGEYFNKKLLGVGIKSILIDSKGSFE---NNL 159 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQAT 237 + L+ IS +G +E+ + V++ T N++ + + Sbjct: 160 EDMETLIVISKSGETKEVLDKVQVAKKKNKVVISFTKEVENSISALSDISFKIFDMHKLD 219 Query: 238 NSA--SISACHAQGMLTDLLFIALIQQDLELAP 268 +S S M + L Q+ + Sbjct: 220 DSNVLPNSFFANMLMFMEYLIYRYYQETRKENK 252 >UniRef50_Q9HT00 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=17 Tax=Halobacteriaceae RepID=GLMS_HALSA Length = 601 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 33/260 (12%), Positives = 75/260 (28%), Gaps = 13/260 (5%) Query: 22 ADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESP 81 A + + +L + +A+ + +V G + + ++ Sbjct: 190 ATAFIEHTNRVTYLRNGDIAHLTET-EWTVY-------NDGARVSRDIEALDWSADAAGK 241 Query: 82 SVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIG 141 S H ++ + I + L + + L++ + + G Sbjct: 242 SGYDHYMLKEIHEQPRALRQAISGRISD----LGTDVTLDMELSTETLQNVAELQIVACG 297 Query: 142 ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADE 201 S L V S D L++AI+ +G + A Sbjct: 298 TSYHAGLYAKELLETHADLPVTVHVASEYELRGGRSPEDTLVVAITQSGETADTLAALRS 357 Query: 202 MLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQ 261 + G LA+T + + + A L+ A A+ +Q LL + + + Sbjct: 358 AAQKGAPTLALTNTLGSTVTREADDALFIRA-GPEIGVAATKTFVSQVATAALLTMHIGR 416 Query: 262 QDLELAPERIRHSEALVKKL 281 ++ ++ L Sbjct: 417 ARNAISTGDAAALRDAIRDL 436 >UniRef50_P45313 Probable phosphosugar isomerase HI1678 n=43 Tax=Bacteria RepID=Y1678_HAEIN Length = 337 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 68/192 (35%), Gaps = 2/192 (1%) Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR 133 + + + + + + A+ ++ +L Sbjct: 8 FFYDSAKITPISTALLGRRMNYLKIAQDSLSVESNALLQLSQRLGDDFNQVIDLILACEG 67 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRR 193 R+++ GIG SGL+ + G + + A + P D+++ ISY+G Sbjct: 68 RLVIGGIGKSGLIGKKMVATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGETD 127 Query: 194 ELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGML 251 ++N + G K++A+T + L + A + L E N A ++ L Sbjct: 128 DVNKLIPSLKNFGNKIIAVTSNKNSTLARHADYVLDITVEREVCPNNLAPTTSALVTLAL 187 Query: 252 TDLLFIALIQQD 263 D L ++LI Sbjct: 188 GDALAVSLITAR 199 >UniRef50_Q1IT00 Glutamine--fructose-6-phosphate transaminase n=7 Tax=Bacteria RepID=Q1IT00_ACIBL Length = 620 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 39/264 (14%), Positives = 80/264 (30%), Gaps = 25/264 (9%) Query: 25 LLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVP 84 +L L LA + + G + + Sbjct: 200 ILHHTRNMFFLHDGDLAVITPNG-------VKVTDFDG----------NVLERKPQRVTW 242 Query: 85 IHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE-------KLHECVTMLRSARRIIL 137 Q + +++ ++ A TL S + ++ R ++ + Sbjct: 243 DPIQAEKGGFKHFMLKEIYEQPRAVRDTTLGRISLDTGKIFLDEMQITADDFRRFEQVYI 302 Query: 138 TGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNL 197 T G S + L ++ V P+DL + I+ +G + Sbjct: 303 TACGTSWHAGLAAKFMLERLAKIRVEVDYASEYRYRDPLVGPNDLTILITQSGETADTIA 362 Query: 198 AADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFI 257 A E G K LA+ + + + A+ +YT A AS A AQ L+ + Sbjct: 363 AQRESKAKGSKTLAVCNVVGSMIAREAAGTVYTHA-GPEIGVASTKAFTAQLTALFLITL 421 Query: 258 ALIQQDLELAPERIRHSEALVKKL 281 + + +++ + R + +L Sbjct: 422 HMAEVRGKISYDDARKYMEELAQL 445 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 51/176 (28%), Gaps = 16/176 (9%) Query: 99 GEKLIKENTAAMYATLNVNS-EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKI 157 K ++E +V + + E A + G G +A A KL +I Sbjct: 435 ARKYMEELAQLPGKLEHVLKLDAETEELAKKYHRASDFLFLGRGIHYPIALEGALKLKEI 494 Query: 158 GFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADE---------MLRVGGK 208 + A + A ++L + I T R+ N + G Sbjct: 495 SYIHAEGYPAGEMKHGPNALIDENLPVVIIATQDTRDANSVLKYEKTISNLQEVKARSGT 554 Query: 209 VLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDL 264 V+A+ + A H ++ E + I LL + + Sbjct: 555 VIAVATEGDPHIADHADHVVFLP--EVPELLSPILEIVP----LQLLAYHIAVRRG 604 >UniRef50_A1WQC0 Transcriptional regulator, RpiR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WQC0_VEREI Length = 326 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 50/277 (18%), Positives = 89/277 (32%), Gaps = 6/277 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + I +R + Q ++++A YL PD +S +A A VS +V +F +KLG+ Sbjct: 46 DFQTLIAERQSTMTQLEQRVAVYLRSNPDAILVDTSNTIAERAFVSPMTVTRFFRKLGFD 105 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 A+K A+ + ASQ S +Q + L + TA A S Sbjct: 106 SAAAVKKAVRQRFASQVPSAIGSRFDQFQRQRTLLDKNGDVKDAVTAIRQA-AQYRSTPM 164 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD-MHALLATVQASSPD 180 V ++ + + G +A +L I N + S Sbjct: 165 WARIVELIAHSDSVFAAGFQTMSYLANGLVSRLNYIRANVHELDGADGVYAPFFADRSAR 224 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 L+ I + R + A G +V+ N + + +E Sbjct: 225 RTLIIIDHFRYGRNGPVLAKVAREQGAEVIIFCDEHCNWAAGITAFVVTLPSEPGFF--- 281 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 A +L +I E +++ Sbjct: 282 -FRPTMALHFCMHMLVQDVIDMLGEPVRRQLQLLSEA 317 >UniRef50_B4U6U7 KpsF/GutQ family protein n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6U7_HYDS0 Length = 319 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 79/178 (44%), Gaps = 2/178 (1%) Query: 95 LRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKL 154 ++ + I + A+ + +E+ + RS ++ILTG+G SG +A+ A + Sbjct: 4 VKDTALETISKEIEAVEGLKLLINEDFEKAIYVIHRSKGKVILTGVGKSGHIARKIASTM 63 Query: 155 MKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITG 214 +G A + AL + S +D++LA+S +G E+ + +G ++++T Sbjct: 64 ASVGTPAVFLHPNEALHGDLGIISKEDVVLALSNSGESAEILYMIPYIKMMGCFLISVTN 123 Query: 215 FTPNALQQRAS--HCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPER 270 + L +++ L E N A S+ A +L D + ++L++ + Sbjct: 124 NKNSTLAKQSDISIVLNIEKEACPLNLAPTSSTTAMLVLGDAMAMSLLRLSGFKEEDF 181 >UniRef50_C1E1Z8 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E1Z8_9CHLO Length = 702 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 43/276 (15%), Positives = 88/276 (31%), Gaps = 21/276 (7%) Query: 22 ADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLA--LSEALASQPE 79 A ++ HL +A+ + + + G + ++ + Sbjct: 260 ASAMVEHTKRVLHLEDDDVAH-LHNGGYGIYRMERSKPTSGTSSPVHYEPTVQSAEVERT 318 Query: 80 SPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATL-------------NVNSEEKLHECV 126 ++ + + + +K I E +M T+ + V Sbjct: 319 VETLQMEVEQIMKGSFKHFMQKEIHEQPESMVQTMRGRMVTCDEGKTAERVFLGGMVNFV 378 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 + +R +RRIIL G G S A + ++ + +L DD + I Sbjct: 379 STIRRSRRIILCGCGTSYNSAIAVRQLMEELTELPVTLELASDVLDRQCPFFRDDTCVFI 438 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S +G + A G + I +A+ + ++ A AS A Sbjct: 439 SQSGETADTLKAMQYAKERGALCVGIVNTVGSAISRSTDCGVHINA-GAEIGVASTKAYT 497 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 Q + LL +AL E + R + +++ L+ Sbjct: 498 CQIVAMVLLALALS----EDSISRATRRKEIMQSLL 529 >UniRef50_D1BR20 Glucosamine/fructose-6-phosphate aminotransferase, isomerizing n=15 Tax=Bacteria RepID=D1BR20_VEIPT Length = 610 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 41/278 (14%), Positives = 90/278 (32%), Gaps = 21/278 (7%) Query: 13 GLAQSDKKLAD---YLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLA 69 GL + + +A ++ LS +LA + S + + + K Sbjct: 182 GLGKGENFVASDIPAIINYTRDTYILSDGELAIVTRDNVSVFDREGKAVD-------KEV 234 Query: 70 LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTML 129 ++ H ++ + + T ++L+ + Sbjct: 235 FHVNWNAEAAEKGGYEHFMLKEIHDQPKAVRDTFGTHISEDGKTA---IFDELNWTAEDV 291 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYT 189 + +I++ G + + + V + + L + IS + Sbjct: 292 AAFNKILIVACGTAYHAGLVTKQYIENLARIPVDVEIASEYRYSNPLTDDKTLCIVISQS 351 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQG 249 G + A E R+G K LAIT +++ + A + +YT A + AS A Q Sbjct: 352 GETSDTLAALKEAKRLGAKSLAITNVVGSSISREADNKVYTWA-GPEISVASTKAYTTQL 410 Query: 250 MLTDLLFIALIQQD-------LELAPERIRHSEALVKK 280 + L + L Q + E +++ +L+ + Sbjct: 411 VAGLLFAVYLGQLNGKMNPAVGEEILSGVKNLPSLIHE 448 >UniRef50_D1JGX9 Glucosamine--fructose-6-phosphateaminotransferase n=1 Tax=uncultured archaeon RepID=D1JGX9_9ARCH Length = 610 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 28/210 (13%), Positives = 71/210 (33%), Gaps = 5/210 (2%) Query: 77 QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRII 136 + ES + +++ +E A + +E +++ + A I+ Sbjct: 243 REESLIEWTIEDAEKGGYEHFMLKEIQEEPKAIRDTLMGYLTEGQINLGRDFIVDAESIL 302 Query: 137 LTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS-PDDLLLAISYTGVRREL 195 L G S A + + + + + + +AI+ +G + Sbjct: 303 LVACGTSYYAALCGKYIIENLAKIPVRIELASEFNYSDFVLDGSKVVAMAITQSGETADT 362 Query: 196 NLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLL 255 A + G K +AIT ++ + A +Y+ A A+ + Q ++ LL Sbjct: 363 LTALKKAKGYGCKTVAITNVLGSSATRLADETIYSRA-GPEIGVAATKSFITQLIIFYLL 421 Query: 256 FIALIQQ---DLELAPERIRHSEALVKKLV 282 + L + ++ + ++++ Sbjct: 422 GLFLSKMPASVFAEHLNELKRMPQIAQRVL 451 Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 23/172 (13%), Positives = 46/172 (26%), Gaps = 8/172 (4%) Query: 95 LRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKL 154 V + + E V E + + L G G + ++ A KL Sbjct: 429 PASVFAEHLNELKRMPQIAQRVLDEVNIQKHARYLSKYENTFFVGRGVNLPISLEGALKL 488 Query: 155 MKIG-FNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRE-LNLAADEMLRVGGKVLAI 212 +I +A + D ++AI E E+ G V+AI Sbjct: 489 KEISYIHAEGYAAGELKHGPFALLTEDTPVIAILTRDDVYEKTLGNVKEIKARGSPVIAI 548 Query: 213 TGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDL 264 +++ + + + + LL ++ Sbjct: 549 AEEGDYEVEKYVDDVIRVPRTSAVFSPIPNT------VALHLLAYWTAKERG 594 >UniRef50_UPI000196C61B hypothetical protein CATMIT_02058 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196C61B Length = 630 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 42/266 (15%), Positives = 75/266 (28%), Gaps = 27/266 (10%) Query: 25 LLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVP 84 LL L ++A S + F K G + E ++P Sbjct: 226 LLAYTKDVYFLDDLEMAVLKKDSIT----FYNKDGEE--------------ITKEMTTIP 267 Query: 85 IHNQIRGDDPLRLVGEKLIKENTAAMYATLN---VNSEEKLHECVT-MLRSARRIILTGI 140 + + K I E + TL L E ++ Sbjct: 268 YDMEAAQKNGYDTYMLKEINEQPHVIQETLRGRIFKDSIVLDELKDVDFNKFNKVYYVAC 327 Query: 141 GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAAD 200 G + A L + + L + +S +G + A Sbjct: 328 GTAYHAGLCGASILERATRLPVLTQVASEFRYNDPIIDEKTLCIFVSQSGETADTLAALK 387 Query: 201 EMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALI 260 G +A+T + + + A + LYT A AS A Q +L L+ + + Sbjct: 388 LANEKGCTTIAVTNVLGSTISRDAQYTLYTCA-GPEIAVASTKAYTTQLVLLTLIALYIA 446 Query: 261 QQDLE----LAPERIRHSEALVKKLV 282 + E++ + V KL+ Sbjct: 447 NKRDNAINTDLMEQLNNLPEYVSKLL 472 >UniRef50_Q7UL04 Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica RepID=Q7UL04_RHOBA Length = 419 Score = 105 bits (261), Expect = 2e-21, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 74/199 (37%), Gaps = 4/199 (2%) Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 K A+ SVP + D +R + + + A+ + S + Sbjct: 41 KDAIVAPQPQLNHGTSVPTLTPLSPLDQIR-LVRETMLREAEAIQKAAAIASADAAEAAA 99 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 + R I+LTG+G +GL+AQ L G A + + A+ + DL++A Sbjct: 100 WISRCEGSIVLTGVGKAGLIAQKLVATLASTGSPAHFLHPIEAVHGDLGRVQSKDLVIAF 159 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT--IAEEQATNSASISA 244 S +G E+ + + ++A+T N L + A H + E A S+ Sbjct: 160 SNSGRSEEVVRVVEYLKHQACGIIAVTADRENPLAELADHVVPIGRHREACPDGLAPTSS 219 Query: 245 CHAQGMLTDLLFIALIQQD 263 + D + + L + Sbjct: 220 TSVMLAVGDAIAV-LASRL 237 >UniRef50_D2PN41 Arabinose-5-phosphate isomerase n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PN41_9ACTO Length = 278 Score = 105 bits (261), Expect = 2e-21, Method: Composition-based stats. Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 2/172 (1%) Query: 103 IKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAA 162 I+ AA+ A + L + +++TG+G SGLV + A L G A Sbjct: 88 IETEAAAVSALADRLDGVFLDVLTAVAGCQGHLVVTGLGKSGLVGRKIAATLASTGTPAT 147 Query: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222 + AL A + DL+LA+S +G E+ A + V+A+TG + L Q Sbjct: 148 FIHAGDALHGDSGAVTSRDLVLALSASGETAEVCAFARMLAERSIPVIAMTGAEHSTLAQ 207 Query: 223 RASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIR 272 A++ L T+ E N A ++ A ++ D L AL+ + R Sbjct: 208 LATYTLDTMVLREADPLNLAPTASTTAALVMGDALACALVVLREFTHHDFAR 259 >UniRef50_D0SVQ9 Arabinose 5-phosphate isomerase n=2 Tax=Acinetobacter RepID=D0SVQ9_ACILW Length = 347 Score = 105 bits (261), Expect = 2e-21, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 69/185 (37%), Gaps = 2/185 (1%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWK 153 + V + ++ A+ + C +L+ R+++TG+G SG + + A Sbjct: 28 DFQKVALETLRIEENALQILATQIDDRFSRACEIILQCTGRLVITGMGKSGHIGRKMAAT 87 Query: 154 LMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 G + + A + D+L+AIS +G E+ + + + ++ I+ Sbjct: 88 FASTGTPSFFMHPGEAGHGDLGMLVAGDVLIAISNSGKSDEIMMLMPLIKHLEIPLITIS 147 Query: 214 GFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERI 271 G + Q A L E A S+ A L D L +AL+ + + Sbjct: 148 GDDRGPMPQNADVALTLGNIQEACPLGLAPTSSTTATLALGDALAVALLDARGFTSDDFA 207 Query: 272 RHSEA 276 R A Sbjct: 208 RSHPA 212 >UniRef50_A1RA62 Putative SIS (Sugar ISomerase) domain protein n=1 Tax=Arthrobacter aurescens TC1 RepID=A1RA62_ARTAT Length = 265 Score = 105 bits (261), Expect = 2e-21, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 96/263 (36%), Gaps = 9/263 (3%) Query: 20 KLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPE 79 ++ L QP A + S +A A + S+V + AQ LG+KG+ + L + Sbjct: 2 QVIGILRSQPRLASYGSVSDIAAVAASNASTVTRTAQTLGFKGWADFQFELRSRFLASLS 61 Query: 80 SPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTG 139 + V + + + + + A + E LH + AR+ + Sbjct: 62 AVEVAAE----HNGHVSSPAQAAVSTDRANLAHFERTLDAETLHNIAKAIAGARQTFIVA 117 Query: 140 IGASGLVAQNFAWKLMKIGFNAAAVR-DMHALLATVQASSPDDLLLAISYTGVRRELNLA 198 G+ + + + G+N + D+ AL + +DL++AIS V A Sbjct: 118 AGSYAIPGKALEHNAIIAGYNVRLLDADVAALTNAIARLGAEDLVIAISLWRVYDSTMRA 177 Query: 199 ADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIA 258 + +G +++IT + + A H + E + + + + Sbjct: 178 VEIAHNLGTPIVSITDSAGSPVAVHADHRIVVPTE----GAGFFPSLTGAVAAVQAIAVE 233 Query: 259 LIQQDLELAPERIRHSEALVKKL 281 L D E + + I SE ++ Sbjct: 234 LASLDRERSNQNIAASERTWDQM 256 >UniRef50_C0X7I6 Phosphosugar-binding transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X7I6_ENTFA Length = 240 Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 44/270 (16%), Positives = 87/270 (32%), Gaps = 49/270 (18%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN +++ Y L +++ ++ YL Q A LS +++A S SS+++ A+KL Sbjct: 1 MNL-DYLKETYH-LTKTESQILYYLDQQSTNAADLSIREVAKHCFSSPSSIIRLAKKLNL 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ L L EA SQP + Sbjct: 59 SGYNELIYKLKEAHFSQPIPYETAPS----------------FETTNEFCRLLAK----- 97 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + ++ G S +A + G + H++ + + + Sbjct: 98 ---------HKSHLFVILGHDFSRHLAAYISEVFNFHGIPSITTAHTHSINSQN---NQN 145 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 L + +S++G + L A +++ G + L + A T + + Sbjct: 146 FLFIILSHSGEEKYLKETALLAKEKKHPIISFVGAKNSTLGRLADLVFST------DSYS 199 Query: 241 SISACHAQ--------GMLTDLLFIALIQQ 262 S AQ + + L A + Sbjct: 200 PFSTSVAQPQMFFGQTLITFEALICAYLNH 229 >UniRef50_D0XK10 KpsF/GutQ family protein n=1 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XK10_9CAUL Length = 332 Score = 104 bits (260), Expect = 3e-21, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 64/180 (35%), Gaps = 2/180 (1%) Query: 93 DPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAW 152 + +I+ N A+ A C +L +++TGIG SG + A Sbjct: 15 GEMTEHARSVIRLNIEALQALERTVDASVARACDIILSRPGYVVVTGIGKSGHIGGKIAA 74 Query: 153 KLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAI 212 L G NA V + D LLAIS +G REL R G V+ + Sbjct: 75 TLASTGTNAFFVHPAEMSHGDLGMLRHDTTLLAISNSGESRELRDPLLFCQRNGIPVIGM 134 Query: 213 TGFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDLELAPER 270 T + L + ++ + + E A ++ L D L + L+ + A Sbjct: 135 TQRGSSFLARMSAVAMVMPSVAEACPNGLAPTTSTLMTLALGDALAMVLMNRRGFSAEAF 194 >UniRef50_C1PCJ9 Glucosamine/fructose-6-phosphate aminotransferase, isomerizing n=1 Tax=Bacillus coagulans 36D1 RepID=C1PCJ9_BACCO Length = 611 Score = 104 bits (260), Expect = 3e-21, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 68/219 (31%), Gaps = 8/219 (3%) Query: 70 LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNV-------NSEEKL 122 LS ++ +++ D + ++++++ A + E Sbjct: 225 LSGEKILPEKTSVRWNQDELNLQDYGHYMLKEIMEQPEAIKRTLKDRLTESGVVIPEVDD 284 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 L RI + G S L + L Sbjct: 285 FFARRKLTDPERITIVASGTSHHAGMIGKKILETMLDIPVEAAIASEFRCEHGRLDEKTL 344 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++AIS +G + A E + G V+AI+ + + L +++ +YT A A+ Sbjct: 345 VIAISQSGETADTISALKEAKKSGAAVIAISNYRKSTLARKSDCVIYTHA-GPELAVAAT 403 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 A Q LL I L ++ +I + L Sbjct: 404 KAYTTQITALVLLSIVLAKKLHGSGEGQIPALLDALHSL 442 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 42/117 (35%), Gaps = 2/117 (1%) Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG-FNAAAVRDMHALLATVQ 175 +++ + + + + L G G ++A A KL ++ +A A T+ Sbjct: 452 MTQDAIDQFAQVTNDQEHLFLIGRGLDYVLALEGALKLQEVAYLHADAYAAGEMKHGTMA 511 Query: 176 ASSPDDLLLAISYTGVRRE-LNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI 231 +P ++A++ R+ E+ V+ IT + + LY Sbjct: 512 LITPGVPVIALATQEHLRDKAINNIKEVKARDAYVVGITTTGDDEVSAVVDEVLYIP 568 >UniRef50_Q6XYV4 Transcriptional regulator n=2 Tax=Spiroplasma RepID=Q6XYV4_SPIKU Length = 271 Score = 104 bits (260), Expect = 3e-21, Method: Composition-based stats. Identities = 42/266 (15%), Positives = 104/266 (39%), Gaps = 18/266 (6%) Query: 2 NGLLRIRQ-RYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 + L ++ + + + ++ Y+ + + LA + S++ +K+ Sbjct: 3 SFLSKLETFDSKNFTKKENEIIKYIKENMKEVTTKNIEVLAQQVNTGYSAIYGLLRKMQI 62 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ +A++ + + + + + +K + + E Sbjct: 63 NGYRDFLIAIAADIEIKSLDF-----------ENMESLMKK---TYFDILNQNDTMIDNE 108 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHA-LLATVQASSP 179 K+++ + ++ A RI + G+G++ ++Q A +L + GFNA + + L+ + + Sbjct: 109 KVNQTINAIKGAYRIFVIGMGSTNALSQTLALELYRFGFNAFNLNENEEDLMVRSRIMNK 168 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRAS--HCLYTIAEEQAT 237 +DL+LA S G +N A G ++ I+G + + A+ H + T + Sbjct: 169 NDLILAYSLFGDNESVNKALTIAKEKGVTIVVISGKDMSKAVKLANLSHIISTPNQRVND 228 Query: 238 NSASISACHAQGMLTDLLFIALIQQD 263 + ++ TD L + D Sbjct: 229 HKIYVNKLLPWMYFTDDLINKVWSSD 254 >UniRef50_Q0FF93 KpsF/GutQ family protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FF93_9RHOB Length = 329 Score = 104 bits (260), Expect = 3e-21, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 72/185 (38%), Gaps = 7/185 (3%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT-----MLRSARRIILTGIGASGLVAQ 148 ++ + + T AM + +EK + V + ++ R++++G+G SG++ + Sbjct: 2 TIKSTFKDCLLTGTNAMVTLTDSLKDEKFVKQVEAAVNVICTTSGRLVISGMGKSGIIGK 61 Query: 149 NFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGK 208 G + + A + DD+LL +S++G REL R Sbjct: 62 KLVATFASTGTPSLFLHPAEASHGDLGMLCKDDVLLLMSFSGESRELIDIIRYSKRFDVP 121 Query: 209 VLAITGFTPNALQQRASHCLYTI--AEEQATNSASISACHAQGMLTDLLFIALIQQDLEL 266 ++A T + L + A L E N A S+ Q L D L I L+++ Sbjct: 122 IIAFTANANSTLGKAADILLQLPKVKESCPHNLAPTSSTLIQLALGDALAITLLKEKGFS 181 Query: 267 APERI 271 + Sbjct: 182 EEDFF 186 >UniRef50_B9Y5H0 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5H0_9FIRM Length = 263 Score = 104 bits (259), Expect = 4e-21, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 97/272 (35%), Gaps = 18/272 (6%) Query: 1 MNG--LLRIRQRYQGLAQSDK-----KLADYLLLQPDTARHLSSQQLANEAGVSQSSVVK 53 M L + + L ++++ LA+Y L L+ +A + VS+SS+ + Sbjct: 1 MKINRLSLLNSLFNVLNENNQGDPYFILAEYFLEHYHELSRLNIYDVAADCFVSRSSIRR 60 Query: 54 FAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYAT 113 F Q +GY+ F A K ++ + R E L +E A + Sbjct: 61 FCQAIGYENFVAFKDEFAQYDDQRASFQKHAGRENYR---------ETLTQEINAMIAEL 111 Query: 114 LNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLAT 173 + ++ + AR ++ F ++ V DM+ + Sbjct: 112 DQRMNTAEVERLAERIHDAREVVFLTSSVGATSVAQFQHSMIFQNKVIRMVSDMYENIDF 171 Query: 174 VQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE 233 V+ +DLLL IS +G+ + D + + T + + A Sbjct: 172 VKHLQKEDLLLVISGSGLFAAASR--DYLRDNPAYKILFTLNRSHDFDDVYDTIYHLSAA 229 Query: 234 EQATNSASISACHAQGMLTDLLFIALIQQDLE 265 +++ + S+ + + D+L+ +++ + Sbjct: 230 DRSQEAKSVYYTYGTIYVLDVLYSVYVKKYGD 261 >UniRef50_A1SXE5 DNA-binding helix-turn-helix domain-containing transcriptional regulator protein n=2 Tax=Gammaproteobacteria RepID=A1SXE5_PSYIN Length = 272 Score = 104 bits (259), Expect = 4e-21, Method: Composition-based stats. Identities = 60/280 (21%), Positives = 108/280 (38%), Gaps = 20/280 (7%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RI + Y L ++D++LADYL + P+ LS+ ++A VS++SV +F +KLGY+ Sbjct: 8 LSERITKNYAQLTKNDQRLADYLQINPEKILILSTNEIAEACLVSKTSVSRFIRKLGYED 67 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 AL+ L A + + + ++ ++ S L Sbjct: 68 HLALRNELLAARDKGEPL-------------SVTALEDSEFRQEVHSLEQLWAQLSGMNL 114 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + + +A+R+ + G S +A +F +LM+ + + S D Sbjct: 115 EQLIKKIATAKRVKIIGYRNSYPLALHFRQQLMQCRSGVDLLPLPGQTIGE--DLSSIDE 172 Query: 183 LLAISYTGVRRELNLAADEMLRV-GGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 I G+RR ++ A+ + ++ G L IT + Q SH L N A Sbjct: 173 DDFIIIIGIRRRVSNFANIISQLSGHDCLLITDQSGQKYAQSVSHFLVCY----MNNQAP 228 Query: 242 ISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + L L + A + R KL Sbjct: 229 LDSYAVPMSLISHLVNKTYRLLSSEAVKISRKISMNYSKL 268 >UniRef50_A0B0Z7 Transcriptional regulator, RpiR family n=68 Tax=Proteobacteria RepID=A0B0Z7_BURCH Length = 295 Score = 104 bits (259), Expect = 4e-21, Method: Composition-based stats. Identities = 41/289 (14%), Positives = 83/289 (28%), Gaps = 21/289 (7%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 + R+ L + K++A Y+L D ++ Q+A + G S SV +F + +GY+ Sbjct: 5 FAHTVESRFAELTPTAKRIASYMLANLDRLGLETADQIAQQTGTSGISVGRFLRSVGYRN 64 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLV-----------GEKLIKENTAAMY 111 LK L +P + + R V ++ A+ Sbjct: 65 LDDLKRELR-GGGDRPWMITDRLDEYRRATATPTTVGERDGHRDGGTLASSLERELDAIR 123 Query: 112 ATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALL 171 + E + + A + + GI ++ ++ F+ L + Sbjct: 124 HVYRLAEEPVFAQVADRIAHADAVFILGIQSTRGISNAFSSYLEYLRPRVFYSDGQSGSY 183 Query: 172 ATVQASS-PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQR--ASHCL 228 S + R G A+ + A L Sbjct: 184 VDSLNSEFERPYCIVTDTRAYSRSARRYCQAAAERGQPF-ALVTDLYCPWAREWPADL-L 241 Query: 229 YTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 + + L +LL A++ + R+ + L Sbjct: 242 QVKTDVGQFWD----SLAPLTCLFNLLITAVVDRLGPAIDRRVARNREL 286 >UniRef50_Q8AAB1 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=82 Tax=Bacteria RepID=GLMS_BACTN Length = 614 Score = 104 bits (259), Expect = 4e-21, Method: Composition-based stats. Identities = 36/265 (13%), Positives = 80/265 (30%), Gaps = 29/265 (10%) Query: 25 LLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKL-ALSEALASQPESPSV 83 ++ D +L ++A + +G LK+ LS + Sbjct: 200 IVEYTDKVVYLEDGEIA----------------VINRG-KELKVVDLSNVEMTPEVKKVE 242 Query: 84 PIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK-------LHECVTMLRSARRII 136 Q+ + +++ ++ + E + + L +A+R I Sbjct: 243 LKLGQLEKGGYPHFMLKEIFEQPDCIHDCMRGRINVEANNVVLSAVIDYKEKLLNAKRFI 302 Query: 137 LTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELN 196 + G S + V D+++AIS +G + Sbjct: 303 IVACGTSWHAGLIGKHLIESFCRIPVEVEYASEFRYRDPVIDEHDVVIAISQSGETADTL 362 Query: 197 LAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLF 256 A + G + I +++ + A+H I AS A Q + +L Sbjct: 363 AAVELAKSRGAFIYGICNAIGSSIPR-ATHTGSYIHVGPEIGVASTKAFTGQVTVLTMLA 421 Query: 257 IALIQQDLELAPERIRHSEALVKKL 281 + L ++ + +V++L Sbjct: 422 LTLAREKGTIDE---TQYLNIVREL 443 Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 50/160 (31%), Gaps = 6/160 (3%) Query: 101 KLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG-F 159 + + M L +N KL E A I G G S VA A KL +I Sbjct: 441 RELNSIPGKMKEVLKLND--KLAELSKTFTYAHNFIYLGRGYSYPVALEGALKLKEISYI 498 Query: 160 NAAAVRDMHALLATVQASSPDDLLLAI-SYTGVRRELNLAADEMLRVGGKVLAITGFTPN 218 +A + + ++ I + G+ ++ E+ GKV+A Sbjct: 499 HAEGYPAAEMKHGPIALIDAEMPVVVIATQNGLYEKVLSNIQEIKARKGKVIAFVTKGDT 558 Query: 219 ALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIA 258 + + A + E + +L + + Sbjct: 559 VISKIADCSIELP--ETIECLDPLITTVPLQLLAYHIAVC 596 >UniRef50_Q0BL14 Arabinose-5-phosphate isomerase n=20 Tax=Gammaproteobacteria RepID=Q0BL14_FRATO Length = 327 Score = 104 bits (259), Expect = 4e-21, Method: Composition-based stats. Identities = 40/168 (23%), Positives = 68/168 (40%), Gaps = 5/168 (2%) Query: 101 KLIKENTAAMYATLNVNSEEKLHECVTMLRSAR---RIILTGIGASGLVAQNFAWKLMKI 157 + + + N E C +L + R R+I+TG+G SG + + A Sbjct: 14 ETFRLEIETLEKLKNSIDENFEKACEIILENNRDKSRVIITGMGKSGHIGKKMAATFAST 73 Query: 158 GFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTP 217 G A V A + +D+L+AIS +G E+ + + ++AIT Sbjct: 74 GTPAFFVHPGEAGHGDFGMITKNDVLIAISNSGTSSEIMGLLPMIKHLDIPIIAITSNPK 133 Query: 218 NALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQD 263 + L + ++ L E N A S+ A +L D L IAL++ Sbjct: 134 SILARNSNVTLNLHVDKEACPLNLAPTSSTTATLVLGDALAIALLKAK 181 >UniRef50_Q041A4 Transcriptional regulator n=8 Tax=Lactobacillus RepID=Q041A4_LACGA Length = 227 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 39/265 (14%), Positives = 91/265 (34%), Gaps = 42/265 (15%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN I +++ L ++K+ Y+ + ++++ ++LA S S +VK +K+ Sbjct: 1 MNIQT-ISEKF-QLNTDEQKILIYMNQHRNEIKNINIRELAKRTFTSPSFIVKTCKKMKL 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ L +++A + + P + +K Sbjct: 59 SGYSELVFLIADAPNFPNNTENDLKVESYVK--PFSNLMDKHKDSMI------------- 103 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ G G S +A + L GF + + L + Sbjct: 104 ---------------MILGSGYSQNIANYMSEYLNLNGFRCTSNSHLEMLRKH-----KN 143 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 L++ IS +G + L + + V++ TG + + + ++ + N Sbjct: 144 TLIIIISNSGETKRLAELCIQAQKNNRDVISFTGDKNSTIAKHSTLAI----SSDTFNPT 199 Query: 241 SISACHAQGML-TDLLFIALIQQDL 264 S + + Q L++ L+ + Sbjct: 200 SFDSHYPQLFFGLTLIYFELLMSNF 224 >UniRef50_B5I9S2 SIS domain protein n=2 Tax=Aciduliprofundum boonei T469 RepID=B5I9S2_9EURY Length = 178 Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 77/179 (43%), Gaps = 7/179 (3%) Query: 98 VGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKI 157 + + + ++ +LN ++ V M+ A++I + G G SGLV + FA +L+++ Sbjct: 1 MFKDSYEYILESIEKSLNSIDVSLVNHGVDMITEAKQIFVYGSGRSGLVGKFFAMRLVQL 60 Query: 158 GFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTP 217 G A + + + DL++ IS TG + L + RVG KV+AIT Sbjct: 61 GLVAYFIGET-----ITPVVNKGDLVVLISNTGRTQSTLLVESIVKRVGAKVIAITSSAK 115 Query: 218 NALQQRASHCLYTIAEEQATNSASISACH--AQGMLTDLLFIALIQQDLELAPERIRHS 274 + L + A E++ A + A + D + +L+ + + + R Sbjct: 116 SPLAKHADLTFVIRYEKEKGELAPLGTLFEDAAVVFLDSIISSLMNKLGQTEEDMRRRH 174 >UniRef50_A5VTJ4 Sugar isomerase, KpsF/GutQ n=36 Tax=Rhizobiales RepID=A5VTJ4_BRUO2 Length = 359 Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats. Identities = 48/218 (22%), Positives = 83/218 (38%), Gaps = 4/218 (1%) Query: 49 SSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTA 108 S V+ ++ + G A K L+ + + + LR + + A Sbjct: 2 PSPVRVKKRATFVG-QAAKKRLTLCAMEKLDITQKLADAEAAITSALRTI-KTENAGLVA 59 Query: 109 AMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMH 168 A N S + ++ S R+++TG+G SG + A G +A V Sbjct: 60 LEEALNNGLSGPFVEAVERIVASRGRLVVTGVGKSGHIGSKLAATFASTGTSAFFVHSGE 119 Query: 169 ALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL 228 A + +D++LAIS++G EL + R ++AIT +AL + A L Sbjct: 120 ANHGDLGMIGLEDVILAISWSGETVELKGIVNYSQRFRIPLIAITSRQDSALGRAADVVL 179 Query: 229 YTI--AEEQATNSASISACHAQGMLTDLLFIALIQQDL 264 E A ++ Q + D L IAL++ Sbjct: 180 LLPKATEACPHGLAPTTSTMMQLAIGDALAIALLEARG 217 >UniRef50_Q1CZW3 GutQ protein n=6 Tax=Cystobacterineae RepID=Q1CZW3_MYXXD Length = 352 Score = 103 bits (257), Expect = 6e-21, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 71/206 (34%), Gaps = 2/206 (0%) Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 + A + + + +++ A+ ++ L Sbjct: 6 RSAAKKPRLRALPGRPAQPPAVLPDAEATLAYARSVLEAEARAILGVTERLGDDFLRAVQ 65 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 + ++I+TG+G +G + Q + L G + + A+ + D++LA+ Sbjct: 66 LVRDCRGQVIVTGMGKAGHIGQKLSATLASTGIRSVYLHPAEAVHGDLGRVGRGDVILAL 125 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTI--AEEQATNSASISA 244 S +G EL R+ V+A+TG + L + A L AE ++ Sbjct: 126 SNSGSTEELIRLLPSFKRMETPVIALTGDAKSPLGRGADVVLDIGAIAEACPMGLVPTAS 185 Query: 245 CHAQGMLTDLLFIALIQQDLELAPER 270 A + D L + +++ + Sbjct: 186 TAALHAIGDALAMTVLRSRPFGTEDY 211 >UniRef50_Q6MHW0 Glucosamine--fructose-6-phosphate aminotransferase (Isomerizing) n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MHW0_BDEBA Length = 628 Score = 103 bits (257), Expect = 6e-21, Method: Composition-based stats. Identities = 21/171 (12%), Positives = 55/171 (32%), Gaps = 1/171 (0%) Query: 108 AAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM 167 ++ ++++ + + +S R+ + G S + + ++ Sbjct: 288 QSVQKLEELDAKADWAKTQEVFKSIERVFIIACGTSNYAGNVGKYLIEQLAKVPVECDIA 347 Query: 168 HALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHC 227 L++ IS +G + A +G L+I + + + A Sbjct: 348 SEFRYRNPVIPAKSLVITISQSGETADTLAAIRMAKEMGATTLSICNVKNSTIDREAHGH 407 Query: 228 LYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 LY + AS A + + + L IA+ + ++ + + Sbjct: 408 LYMNS-GPEIGVASTKAFTSTMAVLNTLAIAIARTRGVMSEAEEKELVKSL 457 >UniRef50_A9A435 Glucosamine--fructose-6-phosphate aminotransferase, isomerizing n=4 Tax=Thaumarchaeota RepID=A9A435_NITMS Length = 586 Score = 103 bits (257), Expect = 7e-21, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 60/198 (30%), Gaps = 2/198 (1%) Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 +++ + E V K I E + S ++ Sbjct: 219 FQISDFNGEQTGYEITKVSKEFGDAYKGDYAHFTLKEIYEQPETILKAGEKTS-SEIEAA 277 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 +R A+ I +TG G S A L K L + +L+A Sbjct: 278 TDYIRQAKNIYITGSGTSYNSALIAKQILSKYVKIKTESIMSSELQFDPNIIEENSILIA 337 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 IS +G ++ A K++AI ++L + A + A+ + Sbjct: 338 ISQSGESADVLEAVKIAKNANCKIIAIVNLVTSSLAREADVVIGLNC-GPEIGVAATKSF 396 Query: 246 HAQGMLTDLLFIALIQQD 263 +Q ++ + L D Sbjct: 397 TSQLVILYKIVQKLSNND 414 >UniRef50_Q1N8R1 Sugar isomerase, KpsF/GutQ n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N8R1_9SPHN Length = 358 Score = 103 bits (257), Expect = 8e-21, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 61/155 (39%), Gaps = 3/155 (1%) Query: 121 KLHECVTMLRSARRIILT-GIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 V ML R ++ GIG SG+VA+ L G A + A + +P Sbjct: 69 TFLRMVGMLMKVRGRVIVTGIGKSGIVARKMTATLTSTGTPAIFLHPADAGHGDLGMVTP 128 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA--EEQAT 237 DD++L +S++G EL R ++ +T + + Q A C+ E Sbjct: 129 DDVVLMLSHSGESTELGPIIQYCKRFAVPLMGMTAQPQSTVAQAADVCILMPDVQEACPN 188 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIR 272 A ++ Q D L ++L++ A + + Sbjct: 189 ALAPTTSTTVQMAFGDALAVSLMEMRGFSADDFHK 223 >UniRef50_D1PBX9 Glutamine-fructose-6-phosphate transaminase n=13 Tax=cellular organisms RepID=D1PBX9_9BACT Length = 634 Score = 103 bits (256), Expect = 8e-21, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 56/174 (32%), Gaps = 1/174 (0%) Query: 105 ENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAV 164 ++T + T + + L +A+RII+ G S + V Sbjct: 291 DDTTSKKETEMGVVLSSITDHRQQLLNAKRIIIVACGTSWHAGLIGKQMIENYCRIPVEV 350 Query: 165 RDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRA 224 + DD+++AIS +G + A G + I +++ + Sbjct: 351 EYASEFRYRNPVVTKDDVVIAISQSGETADTLAAIKLAKESGAFIYGICNSIGSSIARET 410 Query: 225 SHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALV 278 Y AS A Q + LL +A+ ++ ++ + + Sbjct: 411 DTGTYIHV-GPEIGVASTKAFTGQVTVLILLALAIGKERGTISENEYQKITEQL 463 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 51/173 (29%), Gaps = 9/173 (5%) Query: 100 EKLIKENTAAMYATLNVNS-EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG 158 +K+ ++ V K+ + AR I G G VA A KL +I Sbjct: 457 QKITEQLWNIPAKMKEVLKLNNKIADLSRTFTYARNFIYLGRGFQYPVALEGALKLKEIS 516 Query: 159 -FNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRE-LNLAADEMLRVGGKVLAITGFT 216 +A + D ++ I+ E + E+ G+V+AI Sbjct: 517 YIHAEGYPAAEMKHGPIALIDSDMPVVVIATHNFMYEKVLSNIQEIKARQGRVIAIVSNG 576 Query: 217 PNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPE 269 + + A + E + A LL + + + Sbjct: 577 DETISKIADEVIELP--ETLECLEPLLATIP----LQLLAYHVAVCKGKDVDQ 623 >UniRef50_C4ICA8 SIS domain protein n=2 Tax=Clostridium butyricum RepID=C4ICA8_CLOBU Length = 234 Score = 103 bits (256), Expect = 8e-21, Method: Composition-based stats. Identities = 43/250 (17%), Positives = 88/250 (35%), Gaps = 32/250 (12%) Query: 13 GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSE 72 L+ SD K+ +Y++ P + +QLA S +S+++ A+KLGY G+ L + + Sbjct: 15 NLSDSDIKILEYIVDNPGKVQKEGIRQLAKINFTSTASIIRLAKKLGYSGYNELIFDVKK 74 Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 + + + +N + L E Sbjct: 75 MTS----------------------------ESSIKDRQNLVNNSKFPSLDEINFYFNKN 106 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVR 192 + I + G G V KL+ +N + + + + +P LL IS +G Sbjct: 107 KYIYIYGEGFCEFVTGYIHRKLLVKKYNVILLHGLEIPIVYDEMHNP--TLLLISKSGEN 164 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN-SASISACHA-QGM 250 ++M G V++IT + + + + + A N + + Sbjct: 165 FSCINKIEQMRSFNGNVVSITSNPNSTISKSSDISFSIPDDNIADNKNEGFTTFFGDSIN 224 Query: 251 LTDLLFIALI 260 L + +F ++ Sbjct: 225 LLEQIFSKIL 234 >UniRef50_UPI0001C30EDC glucosamine/fructose-6-phosphate aminotransferase, isomerizing n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C30EDC Length = 610 Score = 103 bits (256), Expect = 9e-21, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 58/185 (31%), Gaps = 2/185 (1%) Query: 98 VGEKLIKENTAAMYATLNVNSEEKL-HECVTMLRSARRIILTGIGASGLVAQNFAWKLMK 156 + ++ ++ A ++ + L AR + G G S A + L Sbjct: 257 MLAEIGEQPQALRRTLRAQSAAHAIGEAPWETLAGARSVSFVGCGTSHHAALVGRYLLES 316 Query: 157 IGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT 216 G A V P D++L I+ +G + A G VL +T Sbjct: 317 WGGLRAEVDVASEWRHRDPDVGPGDVVLGITQSGETADTLGALRLARERGAHVLGLTNVP 376 Query: 217 PNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + + + A + T A + A+ Q L + L P R Sbjct: 377 GSQITREADGTILTDA-GTEVSVAATKTFVTQIAALAGLALRTGVARGVLEPARAALLAD 435 Query: 277 LVKKL 281 V++L Sbjct: 436 GVERL 440 >UniRef50_B0N1U0 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B0N1U0_9FIRM Length = 272 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 39/272 (14%), Positives = 96/272 (35%), Gaps = 27/272 (9%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L I + ++ ++A Y+L +S +LA E VS SS+ +F + +G + Sbjct: 14 LLSTINSEL--INSNNYRIAKYILENMRALEDISITELAKECYVSNSSISRFCRDIGLRD 71 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + LK +++ + + + + + + P + E +I+ +E+ + Sbjct: 72 YNELKSQIAKYQPAHQYAKNKFYYQSYQKEVPGQSFVEGVIENL----QLLKRTINEKDI 127 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 ++ VT + + + G S VAQN + L + + + +L Sbjct: 128 YKLVTDIANYSNVAAFGYMQSQSVAQNLQYDLQTCHKFIHTSMKYSDQIEYINNADSSNL 187 Query: 183 LLAISYTGVRRELNLAADEMLRVGG---------KVLAITGFTPNALQQRASHCLYTIAE 233 ++ +S +G K+ IT + + + + + Sbjct: 188 IIILSESGTY------FKRAFERKTLFRNTNDKPKIYLITCNSDIEI-PYVDYYIRYESI 240 Query: 234 EQATNSASISACHAQGMLTDLLFIALIQQDLE 265 + ++ +T ++ ++ LE Sbjct: 241 NDYASHP-----YSLAAITGMICTCYAERYLE 267 >UniRef50_A5UNH8 Glucosamine--fructose-6-phosphate aminotransferase, GlmS n=4 Tax=Methanobacteriaceae RepID=A5UNH8_METS3 Length = 593 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 72/210 (34%), Gaps = 6/210 (2%) Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 + E ++ ++ + K I E A+ TL + E + L Sbjct: 229 DNVIEKEIETIDWTPEMAEKEGYDYFMIKEINEQATAVRNTLTERD--NIQEIIDDLGDI 286 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVR 192 RI G S + + L + V + + D L++ IS +G Sbjct: 287 SRICFVACGTSFHASITGKYLLESLAGIPTDVILASEFKYSANTLNEDTLVIFISQSGET 346 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLT 252 + A D K L + +A+ +RA + + T A A+ +Q Sbjct: 347 ADSLKALDLANET-SKTLGVVNVAGSAITRRADYVIQTQA-GPEIGVAATKTYVSQLTAI 404 Query: 253 DLLFIALIQQDLELAPERIRHSEALVKKLV 282 LF ALI +D E E I +++L+ Sbjct: 405 -YLFAALIAKD-EKLLEDIYKVPDFIEELL 432 Score = 44.2 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 26/168 (15%), Positives = 50/168 (29%), Gaps = 8/168 (4%) Query: 100 EKLIKENTAAMYATLNVNSEEK-LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG 158 EKL+++ + E + + AR G G S +A A KL +I Sbjct: 415 EKLLEDIYKVPDFIEELLKEVDSIKTMSKKYKFARDFFFIGRGYSYPIALEGALKLKEIT 474 Query: 159 FNA-AAVRDMHALLATVQASSPDDLLLAISYTGVR-RELNLAADEMLRVGGKVLAITGFT 216 + + ++ I G R+ +E+ G +LAI Sbjct: 475 YIHGEGYAAGELKHGPLALIDEGIPVVVILPPGENHRKTMSNLEEVKSRGADILAIGSKN 534 Query: 217 PNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDL 264 L+ ++ ++ A + LL + + Sbjct: 535 DERLKLKSDDLFTIDSDVNEV-IAPLVYIVP----LQLLAYYVAVEKG 577 >UniRef50_B5XTC8 Transcriptional regulator, RpiR family n=6 Tax=Enterobacteriaceae RepID=B5XTC8_KLEP3 Length = 240 Score = 102 bits (254), Expect = 1e-20, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 76/233 (32%), Gaps = 29/233 (12%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ R L++++ + ++ P+ + +A + + SS+V+ A+KL + Sbjct: 1 MDLENIFRDV--KLSKTEMTVLRFIQNDPEQCIRQGVRAVAEQCYSNPSSLVRLAKKLKF 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ L + + + I + + +K+ Sbjct: 59 SGWLELVYFIKFNITMPKLDVTNDIDYMSVQPEEALTLLLASLKQQ-------------- 104 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 RI++ G G S L+AQ K + G NA+ + + ++ Sbjct: 105 -------------RILIHGSGFSQLIAQYIYNKFLVTGVNASLALWPDYEILEQKNAACF 151 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE 233 D + IS +G + ++ TG + L Q A Sbjct: 152 DSIWIISKSGRSSSALNWVKALEGKEINLVCFTGDYQSPLAQAADTAFIIHDP 204 >UniRef50_A3ERU9 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=2 Tax=Leptospirillum sp. Group II RepID=A3ERU9_9BACT Length = 615 Score = 102 bits (254), Expect = 1e-20, Method: Composition-based stats. Identities = 30/221 (13%), Positives = 61/221 (27%), Gaps = 14/221 (6%) Query: 70 LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTML 129 L H + + ++L+ S L Sbjct: 235 LVSRSHQGGHGKGEYPHYMFKEIGEQPEMLDRLLSSRIRTER---GRLSVRFSPAAERAL 291 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP-DDLLLAISY 188 A+RI + G G S +++ + V P DLL+ ++ Sbjct: 292 LGAKRIRIVGCGTSFHAGLLGKYRIESLAGIPVEVDVASEFRYREPILDPATDLLVLLTQ 351 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 +G + A G L++ + + A ++ A A+ +Q Sbjct: 352 SGETADTLAALRMAREAGVPTLSLVNVEGSTADREADAAIFLEA-GPEFGVAATKTFLSQ 410 Query: 249 GMLTDLLFI------ALIQQDLELAPERIR---HSEALVKK 280 L L+ + L +++ E + L+ K Sbjct: 411 ITLLTLIALFLAPEVRLAEKEGRSRDEILSDFLKLPMLLDK 451 >UniRef50_C2K0T0 Possible transcriptional regulator n=2 Tax=Lactobacillus rhamnosus RepID=C2K0T0_LACRH Length = 280 Score = 102 bits (254), Expect = 1e-20, Method: Composition-based stats. Identities = 41/260 (15%), Positives = 94/260 (36%), Gaps = 18/260 (6%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 RI+Q L ++ +L L Q + +LA S S++ + +KLG+KG Sbjct: 34 FSSRIQQAKVTLTHNETELLRSLSAQAGVIPRATITELAQSVFSSPSTIHRLIRKLGFKG 93 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + K+ + ++L S+ + + ++ + Sbjct: 94 YTDFKVRVEDSLESELPLVLAQPNLLKITISSIEHTFR----------------LNQGVI 137 Query: 123 HECVTMLRSARRIILTGIGASGLVAQN-FAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 + + +A R + G G A + F+ L+ G ++ +R+ + L V+ + Sbjct: 138 RDAARLFLAAERHYVYGTGWRQKQAVDNFSTDLLVYGESSITLRNKYDLGNAVKQMNEHS 197 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 +LL S +G E + ++++T N L + + +Y + ++ Sbjct: 198 VLLFTSLSGNTDEYAATLQQAKLQKVSIISVTRDVSNPLSEISDVAIYFADDTNLQDNRH 257 Query: 242 ISACHAQGMLTDLLFIALIQ 261 A ++L ++ Sbjct: 258 WPAITMSFS-LEMLINEILN 276 >UniRef50_UPI00016A65F3 transcriptional regulator, RpiR family protein n=1 Tax=Burkholderia ubonensis Bu RepID=UPI00016A65F3 Length = 224 Score = 102 bits (254), Expect = 1e-20, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 74/201 (36%), Gaps = 4/201 (1%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + RI L +++ +Y+L P A + +LA S ++ +FA+ LG+ Sbjct: 15 SIAARIASAMPSLTPIHRRMGEYVLANPFRAATMRIDELAQAVDASIATANRFAKALGFD 74 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDD-PLRLVGEKLIKENTAAMYATLNVNSEE 120 G+PA++ AL + Q + + + + + T + Sbjct: 75 GYPAMRAALVRGFEATLAPVERLRSAQEQEAGVRDAAWIDAVFNQAVENIEDTRAQLNAA 134 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAA---AVRDMHALLATVQAS 177 + V + +ARR+++ G G+S +A L N + + + Sbjct: 135 NIEAAVEAIVAARRVLILGAGSSAFLAGLMEHGLSVCHDNVQSLALLGGPSHAARRLYTA 194 Query: 178 SPDDLLLAISYTGVRRELNLA 198 DL++AI++ + Sbjct: 195 DARDLVIAIAFPRYVEDTIEL 215 >UniRef50_D0D8D8 Transcriptional regulator, RpiR family n=1 Tax=Citreicella sp. SE45 RepID=D0D8D8_9RHOB Length = 290 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 96/260 (36%), Gaps = 9/260 (3%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + R+R ++ +++KLA + + + LA AGVS +V+++ KLG+ Sbjct: 6 DLAARLRN--SAVSTAERKLAAAFAENFPGSALGTVESLATRAGVSGPTVLRYLAKLGFP 63 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 F + A+ + Q SP I + + + + ++ + + Sbjct: 64 RFADFQEAVKAEIDRQLGSPLQQIDR-AKDGGAEHHLYRRALLMQAESLRRAADQAVPAE 122 Query: 122 LHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM-HALLATVQASSP 179 +L +R + G S ++AQ A +L ++ + + T+ P Sbjct: 123 FDAIAELLSDSRLHVRPLGGRYSRILAQRLAMQLSQLRPDVTLLDMQLGFAYDTLVDLGP 182 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 DL++ Y + EL A+ G +++ +T + + Q A L E Sbjct: 183 RDLVVIFDYRRYQEELLSFAEGARAAGARIVLLTDPWRSPIAQLAEAVLTAPDET----L 238 Query: 240 ASISACHAQGMLTDLLFIAL 259 + + + L A+ Sbjct: 239 SPFGSRVVPTAQVEALVAAV 258 >UniRef50_C6AWU1 Transcriptional regulator, RpiR family n=11 Tax=Rhizobium/Agrobacterium group RepID=C6AWU1_RHILS Length = 284 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 48/276 (17%), Positives = 108/276 (39%), Gaps = 6/276 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + + ++RQ + +++++A Y + ++ +A+ +S +V +F + LGY+ Sbjct: 3 DFVQKLRQYAKTGTPAERRIAKYFTEHLNDLPFETAASVADRLDLSPMTVGRFLRSLGYQ 62 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G ++K+ + E + + P + + + L+ E A++ ++ ++ Sbjct: 63 GLDSVKVEIRETVTTSPAQLQSAMSELHADAAEGKPLA-VLVAEQIQALHHIYHLTAQPH 121 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATV-QASSPD 180 E V ++ +AR + + +A +F +L + + A + + D Sbjct: 122 WSEAVGLISTAREVSIATHARLASLANHFCQRLTQARDGVRTLDAADNRFAELFARLAVD 181 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D LL I + L A R G KV+ I+ + + +++ L + Sbjct: 182 DALLVIIDCRRFAKARLLARTARRYGYKVVLISPQQADWMADQSNVMLPLP----PARAP 237 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + L D L ++I Q E A R R Sbjct: 238 DLDNLPPLIALLDCLSESVILQVGEEAALRRRRMME 273 >UniRef50_D1HUZ9 Whole genome shotgun sequence of line PN40024, scaffold_64.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1HUZ9_VITVI Length = 758 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 43/272 (15%), Positives = 90/272 (33%), Gaps = 23/272 (8%) Query: 22 ADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESP 81 A+ ++ + ++ S++KF G ALS + Q Sbjct: 325 ANAVVEHTKQVLVIEDGEV-VHLKDGCVSILKFDNSKGKHS-----GALSRPSSVQRALS 378 Query: 82 SVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLN------------VNSEEKLHECVTML 129 + + + +K I E ++ T+ L + + + Sbjct: 379 ILEMEVEQINKGSYEHYMQKEIHEQPESLTTTMRGRLIRGGSSKSKTVLLGGLKDHLKTI 438 Query: 130 RSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYT 189 R +RRI+ G G S A L ++ + LL +D + +S + Sbjct: 439 RRSRRIVFIGCGTSYNAALAARPILEELSGIPVTMEVASDLLDRQGPIYREDTAVFVSQS 498 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQG 249 G + A + L G + IT +A+ + ++ A AS A +Q Sbjct: 499 GETADTLHALEYALENGALCVGITNTVGSAIARNTHCGVHINA-GCEIGVASTKAYTSQI 557 Query: 250 MLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 ++ +L +A+ + + E+++ L Sbjct: 558 VVMAMLALAI----GDDTSSSLGRRESIIDGL 585 >UniRef50_Q1Q2H0 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q2H0_9BACT Length = 329 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 71/172 (41%), Gaps = 3/172 (1%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWK 153 +K++ + A+ ++ + + R+ +TG+G +G++ Q + Sbjct: 12 SDIDYAKKVLLLESEAIKNQIHRIDNHFQKAVDIIFTCSGRVAVTGVGKAGIIGQKISAT 71 Query: 154 LMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 L G + + A + D++LA+S +G E+ L + ++G K++++T Sbjct: 72 LASTGTPSYWIHSSEARHGDLGKIVASDIVLALSNSGET-EVVLLLPFLKQMGTKIISVT 130 Query: 214 GFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQD 263 G ++L + L E+ A S+ A + D + + + ++ Sbjct: 131 GNNKSSLALHSDVVLDIGNVEEACPLGIAPSSSTTAMLAIGDAIALTIFKKR 182 >UniRef50_Q3B0E2 KpsF/GutQ n=16 Tax=Cyanobacteria RepID=Q3B0E2_SYNS9 Length = 342 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 36/189 (19%), Positives = 71/189 (37%), Gaps = 2/189 (1%) Query: 78 PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIIL 137 ++ + I L ++ + A + E + ++++ Sbjct: 1 MTCMTMGRSSWISVLSALTRCLQEEASAISTAAERLSSEQVEAAIQLLERCADRKAKLVI 60 Query: 138 TGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNL 197 TG+G SG+VA+ A IG A + + AL + +P+D+ L +S +G EL Sbjct: 61 TGVGKSGIVARKIAATFSSIGLMALYLNPLDALHGDLGVVAPEDVCLMLSNSGETTELLE 120 Query: 198 AADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLL 255 + R G +AI G ++L + + L E N A ++ + D L Sbjct: 121 VLPHLKRRGTGRIAIVGRAESSLGRGSDVVLEASIDREVCPLNLAPTASTAVAMAIGDAL 180 Query: 256 FIALIQQDL 264 +++ Sbjct: 181 AAVWMERRG 189 >UniRef50_C1NBK9 KpsF/GutQ family protein n=1 Tax=Escherichia sp. 1_1_43 RepID=C1NBK9_9ESCH Length = 332 Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats. Identities = 28/174 (16%), Positives = 65/174 (37%), Gaps = 2/174 (1%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG 158 ++ ++ + E ++ + R+I+TG+G G +A + L G Sbjct: 16 ARNILASEAQSLLEAIPTIGESFARAIRLLVDTRGRVIVTGMGKPGYIAHKISATLASTG 75 Query: 159 FNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPN 218 + + A + + D++LA+S +G E+ + R+G ++++ G + Sbjct: 76 TPSFYLHPAEAAHGDLGMVTSSDVILALSNSGETPEILALLPVLKRIGLPIISLCGNENS 135 Query: 219 ALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDLELAPER 270 L + + L E N A ++ L D + + L+ + Sbjct: 136 TLAKHSDVFLSAAVKQESCPLNLAPTNSTTLSLSLGDAMAVILMNIRKFKKEDF 189 >UniRef50_D1PYZ2 Arabinose 5-phosphate isomerase n=9 Tax=Prevotella RepID=D1PYZ2_9BACT Length = 328 Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 69/182 (37%), Gaps = 2/182 (1%) Query: 84 PIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGAS 143 ++ + E A+ + + M +II+TG+G S Sbjct: 1 MNTTPEERIHQSIDYAKRCLTEEAQAISDLMLQLDDSFTRAVELMYHCRGKIIVTGVGKS 60 Query: 144 GLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEML 203 G + A L G A + + A + + DD++LA+S +G EL +L Sbjct: 61 GNIGAKIAGTLSSTGTPAFFINPLDAYHGDLGVMTSDDVVLALSNSGQTDELLRFIPILL 120 Query: 204 RVGGKVLAITGFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQ 261 + ++ ++ + L + ++ + E N A S+ A ++ D L IAL+Q Sbjct: 121 HMNIPIVGMSRNPESLLAKYSTVHIKVWVDHEACPLNLAPTSSTTAALVMGDALAIALMQ 180 Query: 262 QD 263 Sbjct: 181 VR 182 >UniRef50_C2D7F4 Glutamine--fructose-6-phosphate transaminase (Isomerizing) n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D7F4_9ACTN Length = 615 Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 69/219 (31%), Gaps = 14/219 (6%) Query: 77 QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATL------NVNSEEKLHECVTMLR 130 P + + K I E A+ L + ++L L Sbjct: 237 HPTTLDINWDASAATLGGYADFMAKEIAEQPEALERLLKGRLTPDGIKLDELAMTSDELA 296 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 S RI + G S V+ + + + L + I+ +G Sbjct: 297 SVDRIYMIACGTSYHVSLIARQYIESWAKIPVCCEFASEFIYKEPLITDHTLCIIITQSG 356 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGM 250 + AA M +G KV+AIT ++ + A +Y A AS A AQ + Sbjct: 357 ETADTLCAARRMKALGCKVIAITNVLGSSAAREADGVVYVQA-GPEICVASTKAYTAQIV 415 Query: 251 LTDLLFIALIQQDL-------ELAPERIRHSEALVKKLV 282 L+ + L + E + L+++++ Sbjct: 416 ACALVALQLAYVRKTLEYSDVQSHFEHLLALSDLIREVI 454 >UniRef50_Q4FNC0 Arabinose 5-phosphate isomerase n=3 Tax=Candidatus Pelagibacter RepID=Q4FNC0_PELUB Length = 323 Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 67/180 (37%), Gaps = 1/180 (0%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWK 153 + + + +I A+ + + ++ ++IL G+G SGL+A + Sbjct: 5 NYKKIAKSVIDLEIKALKKLKDSINNSFNEAVESLANCQSKVILCGVGKSGLIAAKISAT 64 Query: 154 LMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 L +G + ++ + + S D+L+ ISY+G EL R ++ I Sbjct: 65 LSSVGTPSFSLSANDCSHGDLGSISKKDILILISYSGSTEELKNIIKYANRNKITLIGIM 124 Query: 214 GFTPNALQQRASHCLYTI-AEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIR 272 + L + + L E S+ Q + D L +A++ + + + Sbjct: 125 SKKNSILYKASDIKLLIPEVTEAGLGIVPTSSTINQLSIGDALAVAVLNKKNINKKDFKK 184 >UniRef50_A0RRT4 KpsF/GutQ n=18 Tax=Bacteria RepID=A0RRT4_CAMFF Length = 326 Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 72/179 (40%), Gaps = 3/179 (1%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWK 153 + + ++++ + + + + L ++I++G+G SGLV A Sbjct: 11 DILSIAKEVLSLEADELKRQVELLDFKFEKAVNLALSCKGKLIISGVGKSGLVGAKIAAT 70 Query: 154 LMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 L G + + AL + S +D +LAIS++G EL L + + G K++ + Sbjct: 71 LASTGTPSFFLHPTEALHGDLGMISQNDAVLAISFSGESSELLLILPHIKKRGIKIIGM- 129 Query: 214 GFTPNALQQRAS--HCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPER 270 + ++L+ + L + E +A + L D L + L+Q + Sbjct: 130 AKSGSSLEMLSDAFISLDIVREACPLGAAPTVSTTLTLALGDALAVCLMQLKEFKKEDF 188 >UniRef50_A4VW77 Transcriptional regulator n=1 Tax=Streptococcus suis 05ZYH33 RepID=A4VW77_STRSY Length = 189 Score = 101 bits (252), Expect = 2e-20, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 73/180 (40%), Gaps = 2/180 (1%) Query: 95 LRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKL 154 R + +K++ + + AT + EEKL E ++ S++R+ GIG+SGLVA + Sbjct: 9 QRSLAKKVLVDYEEILTATNKLVDEEKLEEIAKLIDSSKRVYFYGIGSSGLVAMEIKSRF 68 Query: 155 MKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITG 214 M++G A+ D + L+ T L++ +S +G E+ + G +T Sbjct: 69 MRLGVVCDAITDENNLIWTTNILDDSCLVIGLSLSGQTEEVMEHLQLAAQKGIPTALLTT 128 Query: 215 FTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 + + + IS ++ D+++ + D E + + Sbjct: 129 R--SFPHPTFDQIIPVASVRHLNYGNRISPQIPLLIMLDIIYAYFLAIDKEKKENIFKQT 186 >UniRef50_Q9Z826 Uncharacterized protein CPn_0526/CP_0226/CPj0526/CpB0547 n=13 Tax=Chlamydiaceae RepID=Y526_CHLPN Length = 329 Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 58/171 (33%), Gaps = 3/171 (1%) Query: 97 LVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILT-GIGASGLVAQNFAWKLM 155 V + ++ + A+ ++ + + + G+G SG VA+ L Sbjct: 9 DVCQDILGKQKEAVDFFFQAFQPKEAMQLAEKILGHSGWVFFSGVGKSGCVARKLVATLQ 68 Query: 156 KIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGF 215 + A + L + SP D++ S +G +EL + ++AIT Sbjct: 69 SLSERALFFSPVDLLHGDLGLVSPGDIVCLFSKSGETQELLDTVPHLKSRRAILVAITSM 128 Query: 216 TPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDL 264 + L + + + E N ++ Q + D L + L Sbjct: 129 PYSNLAALSDLVVILPSVAELDPFNLIPTNSTTCQMIFGDFLAMLLFHSRG 179 >UniRef50_D1C5T9 Glutamine--fructose-6-phosphate transaminase (Isomerizing) n=2 Tax=Bacteria RepID=D1C5T9_SPHTD Length = 350 Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats. Identities = 36/174 (20%), Positives = 60/174 (34%), Gaps = 8/174 (4%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRI--ILTGIGASGLVAQNFAWKL-M 155 ++ ++E A+ L E+ +R A ++ G+SG A + L M Sbjct: 7 FDREVREQPEALERLLARGREQA-EAIAEAIRDAEPNLIVIVARGSSGNAAVYAKYLLGM 65 Query: 156 KIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGF 215 + GF L +++ IS +G ++ + + G +AIT Sbjct: 66 RNGFPVTLAAPSMFTLYQQPPRLGRAVVIGISQSGQSADIVAVEEAARQQGALTVAITNH 125 Query: 216 TPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPE 269 + L A +CL A A+ Q M LL AL E A Sbjct: 126 PESPLATAADYCLPLHA-GPEYAVAATKTYTNQLMALALLSTAL---RGEDADA 175 >UniRef50_C3RLJ5 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RLJ5_9MOLU Length = 229 Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats. Identities = 44/263 (16%), Positives = 87/263 (33%), Gaps = 39/263 (14%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN +R ++ L + + L YL + + ++ +Q+A+ S S++ + K G+ Sbjct: 1 MNI-EHLRDKFD-LNELELALVKYLEDNQNNLKDITIRQMASANFTSTSAIYRLCNKFGF 58 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ + LS + +Q SP ++ A LN Sbjct: 59 SGYSDMIYQLSSSNNTQLFSPDD-------------------FEQYIPAFIELLNK---- 95 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 II+ G+G S +A +L GF A V L + Sbjct: 96 ---------HRQHNIIVFGMGFSAPIADYLQQRLTLNGFYAMNVVHTEMLDI---KYQDN 143 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE--QATN 238 L + IS +G+ L D + +++ + L Q + + + N Sbjct: 144 SLFIVISNSGITPRLVEIVDNAFKNNIDIISFIANENSNLYQNVTLPIIVGSYNSFTHNN 203 Query: 239 SASISACHAQGMLTDLLFIALIQ 261 + ++ + L + Sbjct: 204 LVPNTFFGQVLIVFESLLYTYLS 226 >UniRef50_Q11YC7 Sugar phosphate isomerase, KpsF/GutQ family n=27 Tax=cellular organisms RepID=Q11YC7_CYTH3 Length = 322 Score = 101 bits (251), Expect = 3e-20, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 73/179 (40%), Gaps = 2/179 (1%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWK 153 + + +I + A+ +N +++ H +L R+++TGIG S ++ Sbjct: 6 NIVSIVTDVILNESEAIKNLVNHINDDFQHIIDAILSCKGRVVITGIGKSAIIGNKIVAT 65 Query: 154 LMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 L G A + A+ + D+++ IS +G E+ + + G ++ + Sbjct: 66 LNSTGTPALFMHAADAIHGDLGMIQGGDVVICISKSGNTPEIKVLVPLIKNRGTILIGMV 125 Query: 214 GFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDLELAPER 270 G + L ++ + L E N A ++ A ++ D L +AL++ + + Sbjct: 126 GNVDSYLAVQSDYVLNVTVEREACPNNLAPTTSTTATLVMGDALAVALLECRNFSSEDF 184 >UniRef50_Q8U472 Hexulose-6-phosphate synthase (D-arabino 3-hexulose 6-phosphate formaldehyde lyase) n=2 Tax=Pyrococcus RepID=Q8U472_PYRFU Length = 434 Score = 101 bits (251), Expect = 3e-20, Method: Composition-based stats. Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 5/155 (3%) Query: 91 GDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNF 150 D +K +K+ T + + E++ V + A +I + G G SGLV + F Sbjct: 255 FWDEYMRTIKKAMKDITEHINEVADKLKLEEVRGLVDAMIGANKIFIYGAGRSGLVGKAF 314 Query: 151 AWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVL 210 A +LM + FN V + A DLL+AIS +G + + AA+ + GGKV+ Sbjct: 315 AMRLMHLDFNVYVVGET-----ITPAFEEGDLLIAISGSGETKTIVDAAEIAKQQGGKVV 369 Query: 211 AITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 AIT + + L + A + + A Sbjct: 370 AITSYRDSTLGKLADVVVEIPGRTKTDVPTDYIAR 404 >UniRef50_Q1ZIS3 GutQ protein n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZIS3_9GAMM Length = 318 Score = 101 bits (251), Expect = 3e-20, Method: Composition-based stats. Identities = 38/163 (23%), Positives = 65/163 (39%), Gaps = 2/163 (1%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG 158 + K + A+ A E L M RII+ G+G SG + + + L +G Sbjct: 14 VRNVFKIQSDALDAHRKGLGTEYLDALDLMKSCTGRIIVCGMGKSGHIGKKISATLASVG 73 Query: 159 FNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPN 218 + + A + + +DLLL ISY+G E+ + G K+++ITG + Sbjct: 74 TPSFFMHPGEAFHGDLGMITTEDLLLLISYSGETDEVLKIIPSLQHFGNKIISITGAKDS 133 Query: 219 ALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIAL 259 L + + L E N A ++ ++ D L L Sbjct: 134 TLAKNSDVVLVAAIQKETCPINLAPTTSTTLTLVIGDALSSVL 176 >UniRef50_B1CBZ6 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CBZ6_9FIRM Length = 203 Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 68/161 (42%), Gaps = 3/161 (1%) Query: 100 EKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF 159 +K+I+ + ++ + + + +IILTG G SGL+++ A L G Sbjct: 11 KKVIEMERYELGRLMDSLDDNFVKAVDMITECKGKIILTGTGKSGLISRKIAATLCCTGK 70 Query: 160 NAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLA-ADEMLRVGGKVLAITGFTPN 218 A + + + A P+DL++AIS +G L +G K + +TG T + Sbjct: 71 PAFFLSAYNCENGDIGAIQPNDLIIAISNSGETTILKELVIPSAKTIGAKAICLTGNTES 130 Query: 219 ALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFI 257 L + LY E++ T + ++ + D L + Sbjct: 131 TLAKLCDVALYIGVEKEACPTGVNATTSTTNTLAMGDALAM 171 >UniRef50_C0QVG6 D-arabinose-5-phosphate isomerase n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0QVG6_BRAHW Length = 320 Score = 100 bits (250), Expect = 4e-20, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 62/173 (35%), Gaps = 2/173 (1%) Query: 100 EKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF 159 + + + + + + + R+I +G+G SG +A+ A G Sbjct: 8 KTTLLLESENLKMLSDKLDSNFENAVKELFNIRGRVITSGVGKSGHIARKAAATFASTGT 67 Query: 160 NAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNA 219 + V + + +D L S G RE+ + + R +AIT + Sbjct: 68 PSFFVDPNECMHGDFGMITKEDYCLLYSKGGESREIIELVNWLCRQNIPYIAITNDINST 127 Query: 220 LQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQDLELAPER 270 L + A L T +E+ A + A L+D L AL++ A + Sbjct: 128 LSKNAKITLLTHVKEEACPLRLAPTVSTTASLALSDALATALMELRGFRAEDF 180 >UniRef50_C6A1J9 Bifunctional D-arabino 3-hexulose-6-phosphate formaldehyde lyase/phosphohexuloisomerase n=7 Tax=Thermococcaceae RepID=C6A1J9_THESM Length = 406 Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats. Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 23/203 (11%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWK 153 K+I++ T + E++ V + A +I + G G SGLV + FA + Sbjct: 210 EYMQTIVKVIQDITDHIKTVATSLKLEQVRGMVDAMIGANKIFIYGAGRSGLVGKAFAMR 269 Query: 154 LMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 LM + FN V + A DLL+AIS +G R + AA+ GGKV+ IT Sbjct: 270 LMHLDFNVYVVGET-----ITPAFEEGDLLIAISGSGETRTIVDAAEIAKNQGGKVVGIT 324 Query: 214 GFTPNALQQRASHCLYTIAEEQAT---------------NSASISACH--AQGMLTDLLF 256 + + L + + + +A A + + +L D + Sbjct: 325 SYKNSTLGKLSDVVVEIPGRTKADIPTDYIARQMLTEYKWMAPMGTLFEDSTMLLLDGVI 384 Query: 257 IALIQQDLELAPERIRHSEALVK 279 L+ + + + ++ A ++ Sbjct: 385 ALLM-ATFQKSEKDMKRKHATLE 406 >UniRef50_Q9YCQ6 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=9 Tax=Thermoprotei RepID=GLMS_AERPE Length = 617 Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 61/183 (33%), Gaps = 2/183 (1%) Query: 77 QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLN-VNSEEKLHECVTMLRSARRI 135 + V + K I E A+ T + + L ++ A R+ Sbjct: 244 EERVKRVEWTPESASKAGYPHFMLKEIYEQPRALAETFEGIIEDPALLRAAGLVAGAGRL 303 Query: 136 ILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRREL 195 ++ G G S + L ++ + +++A+S +G + Sbjct: 304 LIVGAGTSFHAGLVGHYYLSRLAGILGHPVVASEHKVYTPGVDGETVVVAVSQSGETYDT 363 Query: 196 NLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLL 255 A E G +V+ +T +AL + A LY A A+ AQ +L L Sbjct: 364 LEAVREWRGRGARVIGVTNVVGSALDREADVTLYLRA-GPEIGVAATKTFLAQTILLQTL 422 Query: 256 FIA 258 IA Sbjct: 423 SIA 425 >UniRef50_Q8Q038 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=131 Tax=cellular organisms RepID=GLMS_METMA Length = 618 Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 72/218 (33%), Gaps = 9/218 (4%) Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLN--------VNSEEKL 122 E + + + + K I E +A++ TL ++L Sbjct: 233 REGKLKEKKIEKIEWDFEAAEKAGYEHFMLKEIHEQVSAIHNTLAGKVSELEGAIYLKEL 292 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + ++ R+ + G S + ++ + L Sbjct: 293 NLNDDEIKKLSRVQILACGTSWHAGLLGKYLFEQLAGIHCDIDICSEYRYRNPVMHEGTL 352 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 +AI+ +G + A E++ LAIT + + + A+ LYT A A+ Sbjct: 353 AIAITQSGETADTLAAVREIMSYNCPTLAITNVVGSTITREANSVLYTRA-GPEIGVAAT 411 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 Q +L LL + +L+P+ ++ ++K Sbjct: 412 KTFSTQLILLYLLAVKFALVRGKLSPDYVKSFITEIRK 449 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 21/144 (14%), Positives = 47/144 (32%), Gaps = 3/144 (2%) Query: 97 LVGEKLIKENTAAMYATLNVNSEEK-LHECVTMLRSARRIILTGIGASGLVAQNFAWKLM 155 + I E + ++++ + EC ++ G S +A A KL Sbjct: 438 DYVKSFITEIRKVPGEIQQILNQKEVIRECAENFACSKSYFFLGRHLSYPIALEGALKLK 497 Query: 156 KIGF-NAAAVRDMHALLATVQASSPDDLLLAISYTGVRRE-LNLAADEMLRVGGKVLAIT 213 +I + +A + ++AI+ G E + E+ V+A+ Sbjct: 498 EISYVHAEGFAAGELKHGPIALLDEGAPVVAIATKGQTYEKMLSNIKEVKARDAYVIAVA 557 Query: 214 GFTPNALQQRASHCLYTIAEEQAT 237 + + A L + ++ Sbjct: 558 NINDTEIGKYADVVLRVPSCDELL 581 >UniRef50_A3DPP9 Glutamine--fructose-6-phosphate transaminase n=11 Tax=Thermoprotei RepID=A3DPP9_STAMF Length = 608 Score = 100 bits (249), Expect = 6e-20, Method: Composition-based stats. Identities = 28/195 (14%), Positives = 60/195 (30%), Gaps = 6/195 (3%) Query: 92 DDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFA 151 K I E +M T E+ L ++ A+ + + G G S + Sbjct: 255 KAGYPHYMLKEIYEIPDSMIKTTYSLMEKYLRLAAMIIYGAKNVYVIGNGTSLHAGMVSS 314 Query: 152 WKLMKI-GFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVL 210 + + N V ++ S +++AIS +G ++ + + G ++ Sbjct: 315 YYFTDLANINVNVVSAAEFPYYALKNVSTGTVIIAISQSGETSDVIKSVKLAKQYGAVII 374 Query: 211 AITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPER 270 +T + L ++ L A + + + LL +L+ Sbjct: 375 GVTNVVGSRLSLESNVYLPIGA-GPELAVPATKTFVSSLVALALLAGYTGLYTGKLSQTE 433 Query: 271 I----RHSEALVKKL 281 K+L Sbjct: 434 YVGITEKIRETAKEL 448 >UniRef50_O27589 Conserved protein n=6 Tax=Methanobacteriaceae RepID=O27589_METTH Length = 254 Score = 100 bits (249), Expect = 6e-20, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 81/213 (38%), Gaps = 22/213 (10%) Query: 79 ESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILT 138 P+V I ++ + ++ ++ I++ + E L + +L SA + + Sbjct: 43 PFPTVFISYRVYIGIGVAMIIKEAIRDIIHNLEKMERDIDERTLDNFIEILTSAANVFVL 102 Query: 139 GIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLA 198 G+G SGLVA+ FA +LM + NA V + A + D+L+AIS +G + A Sbjct: 103 GLGRSGLVARAFAMRLMHLEINAFVVGET-----ITPAINEGDVLIAISGSGRTSYIVNA 157 Query: 199 ADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI---------SAC---- 245 A G KV+A+T + + L A + + + Sbjct: 158 ASIARERGAKVVAVTSYPDSDLAGLADLTVTIKGRTKIDGEKDYMKRQMRGNHHSRTPLG 217 Query: 246 ----HAQGMLTDLLFIALIQQDLELAPERIRHS 274 + + D + L+++ + + Sbjct: 218 TLFEISALVFLDGIIAELMERFDKREEDLHHRH 250 >UniRef50_B5H4P8 Predicted protein n=4 Tax=Streptomyces RepID=B5H4P8_STRPR Length = 304 Score = 100 bits (248), Expect = 7e-20, Method: Composition-based stats. Identities = 54/243 (22%), Positives = 100/243 (41%), Gaps = 2/243 (0%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQP-DTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 +R ++ L+ +++ +A YL+ P + S+Q+L +G S ++VV+ Q+LGY Sbjct: 17 LRATVRDQWDELSAAERTVAQYLVSAPAEQVMFASAQELGTASGTSNATVVRALQRLGYA 76 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G PALK L+ S L+ + + E + + + Sbjct: 77 GLPALKRELAADFTSALAPEVRLKQRIAHVGQDLQTIWNDVFDETQDRIDQCRRLTGADA 136 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLAT-VQASSPD 180 L + V L AR ++ G+ A L A++ A L +IG A V LA + + + Sbjct: 137 LQQAVAALADAREVLCYGVAACELAARHLALALGRIGRRARFVGATGFALADPLLSLAQG 196 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 D ++ EL + + VG KV+ +T A ++R L + Sbjct: 197 DTVVIFQPGRPLSELTVLVERARSVGAKVVFVTDELGEAFEERVDAILTAPHTPTGITNE 256 Query: 241 SIS 243 +++ Sbjct: 257 ALT 259 >UniRef50_C7M027 Transcriptional regulator, RpiR family n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M027_ACIFD Length = 282 Score = 100 bits (248), Expect = 8e-20, Method: Composition-based stats. Identities = 50/270 (18%), Positives = 88/270 (32%), Gaps = 18/270 (6%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 L +++ + D A SS +LA AGVSQ SV + A LG+ +P L+ AL Sbjct: 18 NRLTPVQRRIVQTIAEHLDDADTFSSAELAAIAGVSQPSVTRLASALGFASYPELRQALR 77 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 + + + + E + + SE L E L Sbjct: 78 ALVRDDSQPVESTPR------------LDAVRDEIANLTWMERQLTSEPLLAEAGRRLAG 125 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATV---QASSPDDLLLAISY 188 + +++ G+ AS +A ++ K+ V + + + L ++ Sbjct: 126 SVPLLVIGLRASAPLAAYLSFYARKVHPAVITVDRAGSEGIDAIAEAHARGANAALVLAL 185 Query: 189 TGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 REL + +G ++ I +Q RA L SA Sbjct: 186 PRWPRELLTLVEVAGDLGIDLVTIADRAHGPIQARARVSLVAPVGTSLLYDTHASAFVLA 245 Query: 249 GMLTDLLFIAL---IQQDLELAPERIRHSE 275 +L + A + +E ER Sbjct: 246 QLLVQAIADAAPLSAKASMEAFEERASRYR 275 >UniRef50_Q9LBW5 3-hexulose-6-phosphate isomerase n=2 Tax=Actinomycetales RepID=PHI_MYCGS Length = 199 Score = 100 bits (248), Expect = 8e-20, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 66/182 (36%), Gaps = 12/182 (6%) Query: 103 IKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAA 162 + + T E++ + R+ + G G SGLV + A +LM G Sbjct: 22 LSLVRDEVADTAAKVDPEQVAVLARQIVQPGRVFVAGAGRSGLVLRMAAMRLMHFGLTVH 81 Query: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222 D A S DLLL S +G + +A+ + G ++ A T + L Sbjct: 82 VAGDTTT-----PAISAGDLLLVASGSGTTSGVVKSAETAKKAGARIAAFTTNPDSPLAG 136 Query: 223 RASHCLYTIAEEQATNSASISACHA-------QGMLTDLLFIALIQQDLELAPERIRHSE 275 A + A ++ + + IS +A ++T+ +F +L A E Sbjct: 137 LADAVVIIPAAQKTDHGSHISRQYAGSLFEQVLFVVTEAVFQSLWDHTEVEAEELWTRHA 196 Query: 276 AL 277 L Sbjct: 197 NL 198 >UniRef50_UPI0001C420F8 glucosamine-fructose-6-phosphate aminotransferase GlmS2 n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C420F8 Length = 594 Score = 99.7 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 71/216 (32%), Gaps = 5/216 (2%) Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 K E + ++ K I E + A+ TLN + K Sbjct: 223 KFLDENDQEMTKEIEVIEWSPEMAEKGGYDHFMIKEINEQSTAIKNTLNEKDKVK-EIVD 281 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 + + R++ G S + + + + V + +A + L++ I Sbjct: 282 EVKGTINRVVFVACGTSYHASLTGKYLIESLVGIPTEVLLASEFKYSAKALNDKTLVIFI 341 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S +G + A D K LAI ++ +RA + + T A A+ Sbjct: 342 SQSGETADTLKALDVANET-SKTLAIVNVRGSSATRRADYVIQTQA-GPEIGVAATKTYV 399 Query: 247 AQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 +Q + L L + +R+ +++++ Sbjct: 400 SQLVAIYLFSALLGEDH--ELLKRLEKVPDYIEEVL 433 Score = 40.7 bits (94), Expect = 0.063, Method: Composition-based stats. Identities = 18/147 (12%), Positives = 43/147 (29%), Gaps = 5/147 (3%) Query: 93 DPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAW 152 + ++ +++ + L ++ E + + G G S +A A Sbjct: 413 GEDHELLKR-LEKVPDYIEEVLQKRD--EIKEISKKYKRDKDAFFIGRGFSYPIALEGAL 469 Query: 153 KLMKIG-FNAAAVRDMHALLATVQASSPDDLLLAISYTGV-RRELNLAADEMLRVGGKVL 210 KL +I +A + + ++ + G +++ E+ G VL Sbjct: 470 KLKEISYIHAEGYAAGELKHGPIALIDRNIPVVVVIPPGQDHKKIMSNLQEVKARGADVL 529 Query: 211 AITGFTPNALQQRASHCLYTIAEEQAT 237 I L + + Sbjct: 530 GIGAVGDEDLISESDDTFLINCDVDDI 556 >UniRef50_C3RNI1 Predicted protein n=2 Tax=Bacteria RepID=C3RNI1_9MOLU Length = 274 Score = 99.7 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 31/255 (12%), Positives = 76/255 (29%), Gaps = 10/255 (3%) Query: 22 ADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESP 81 A +L + +A VS +++ + +KL Y+ F K+ ++ L Sbjct: 25 ARKILQNIYVIPGSTITDVAELCFVSTATISRLCRKLNYESFADFKIDITMNLNYFNRDT 84 Query: 82 SV----PIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIIL 137 Q + + V + + T S E L V + A ++ Sbjct: 85 LRLQFDHQLPQRQYLHKGKEVFKAHFDNILDNLKETYESVSYEDLEFIVDKIHDANKVCF 144 Query: 138 TGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISY-TGVRRELN 196 G + V+ +L +G + + + + TV+ +D+++ S G + Sbjct: 145 AGNFFTQSVSMQLQIELSYLGKECSGMYPLEQQILTVEGLDENDVIIVSSIAGGFMTDHP 204 Query: 197 LAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLF 256 + + + I+ L + + + + ++L Sbjct: 205 DVMRVISKSPAYKIVISQLDEFVYSDSIDMILKVGTDHHSLIGK-----FSITYIFEVLE 259 Query: 257 IALIQQDLELAPERI 271 + + Sbjct: 260 ALYHLKYGVKEKREL 274 >UniRef50_C1QDK1 KpsF/GutQ family protein n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QDK1_9SPIR Length = 321 Score = 99.7 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 64/173 (36%), Gaps = 2/173 (1%) Query: 100 EKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF 159 + + + + + + + + R+I +G+G SG +A+ A G Sbjct: 8 KTTLLLESENLRDLSDKLDINFENAVKELFKIRGRVITSGVGKSGHIARKAAATFASTGT 67 Query: 160 NAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNA 219 + V + + DD + S G RE+ + +LR +A+T + Sbjct: 68 PSFFVDPNECMHGDFGMITKDDYCILYSKGGESREIIELVNWLLRQNISYIAVTNEIDST 127 Query: 220 LQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQDLELAPER 270 L + A L T +E+ A + A L+D L AL++ A + Sbjct: 128 LAKNAKIVLLTYVKEEACPLKLAPTVSTTASLALSDALATALMEIRGFRAEDF 180 >UniRef50_Q96XH0 581aa long hypothetical glucosamine--fructose-6-phosphate aminotransferase n=1 Tax=Sulfolobus tokodaii RepID=Q96XH0_SULTO Length = 581 Score = 99.3 bits (246), Expect = 1e-19, Method: Composition-based stats. Identities = 26/216 (12%), Positives = 75/216 (34%), Gaps = 4/216 (1%) Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 K+ ++ + + +++ + + + N E+ L Sbjct: 212 FKIFNTQGEVNGELKRVKYKEEIADKGGFSHFMLKEIYDIPLSLINSV-NSLMEKYLSLA 270 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 ++ +AR++ + G+S ++ L + N V + + +++A Sbjct: 271 SMIIANARKVYIIANGSSLHAGYISSYYLHDVSLNV--VSAAEFPYYALDNITTGTVVIA 328 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 IS +G ++ + + G +L IT + L ++ L + Sbjct: 329 ISQSGETSDVIRSVKLAKQRGAVILGITNSVGSRLALESNVYLPI-TAGPELAVPATKTF 387 Query: 246 HAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + ++ +L + Q ++ + I H + +++L Sbjct: 388 TSTIIVLKILSDYVSYQLGKIDKKDIDHDKNEIQRL 423 >UniRef50_A9B0V2 Glutamine--fructose-6-phosphate transaminase (Isomerizing) n=3 Tax=Bacteria RepID=A9B0V2_HERA2 Length = 348 Score = 99.3 bits (246), Expect = 1e-19, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 58/186 (31%), Gaps = 4/186 (2%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWK 153 + ++ ++ + + R+ +I++ G S A+ + Sbjct: 3 TQSHLYREIYEQPQSLARLLEAEKATVAKLAAAIRERNISQIVIAARGTSDNAARYAQYL 62 Query: 154 LMKI-GFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAI 212 L + G + + +L IS +G ++ E + G AI Sbjct: 63 LGSLNGILVTLATPSLFSIYQRPPVLGNVCVLGISQSGKSPDIVAVLTEARKQGALTAAI 122 Query: 213 TGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIR 272 T T + L Q + A E A+ + AQ LL AL D + + Sbjct: 123 TNKTDSPLAQAGDFVIDLHAGE-ELAVAATKSYTAQLAAIALLSTALA--DDSAMNQALE 179 Query: 273 HSEALV 278 +V Sbjct: 180 RLPRVV 185 >UniRef50_Q1MQL2 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains n=5 Tax=Desulfovibrionales RepID=Q1MQL2_LAWIP Length = 609 Score = 99.3 bits (246), Expect = 1e-19, Method: Composition-based stats. Identities = 28/181 (15%), Positives = 59/181 (32%), Gaps = 4/181 (2%) Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS- 131 + + + + + +++ ++ ++E H L + Sbjct: 231 NPVKKSIQTISWDKHSAQKNGYKHFMLKEIFEQPQVIEECLSERINQETDHIYFPELDNL 290 Query: 132 --ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYT 189 RII+ G+S L + +SP +L++ IS + Sbjct: 291 PIPTRIIVVACGSSYHAGIWGRNILERWAKIPTLPEIASEFRYQELITSPGELIIVISQS 350 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQG 249 G + A G KV+A+ + + + A +YT A + AS A +Q Sbjct: 351 GETADTLAALKLAKEKGCKVIALCNVIGSTIAREADATIYTQA-GPELSVASTKAVCSQM 409 Query: 250 M 250 + Sbjct: 410 I 410 >UniRef50_A9KTD7 Glucosamine--fructose-6-phosphate aminotransferase, isomerizing n=14 Tax=Clostridiales RepID=A9KTD7_CLOPH Length = 614 Score = 99.3 bits (246), Expect = 1e-19, Method: Composition-based stats. Identities = 35/227 (15%), Positives = 65/227 (28%), Gaps = 21/227 (9%) Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLN---------------- 115 +PE SV + + K I E A+ T+ Sbjct: 222 NEERVEPEMLSVTWDMSAAQKNGFKHYMLKEIYEQPEAITRTIAPRIKKYTGEDSKKEYL 281 Query: 116 VNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQ 175 + + ++ RII+T G + L ++ V Sbjct: 282 LPDLTCDNIPDSLFSDINRIIITACGTAMHAGLMGKVLLERLLRIPVTVDIASEFRYQDP 341 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 + L++ +S +G + A +G K L+I +A+ + + + YT A Sbjct: 342 IMDRNTLVITVSQSGETADTLAALRLAHEMGAKTLSIVNVKGSAIARESDYVFYTHA-GP 400 Query: 236 ATNSASISACHAQGMLTDLLFIALIQQDL----ELAPERIRHSEALV 278 AS A AQ +L ++ +V Sbjct: 401 EIAVASTKAYTAQLSAFYILAFRFAYAKGCLAKNEVSNYLQKLYDVV 447 >UniRef50_Q4A7H2 Putative uncharacterized protein n=6 Tax=Mycoplasma RepID=Q4A7H2_MYCH7 Length = 259 Score = 99.3 bits (246), Expect = 1e-19, Method: Composition-based stats. Identities = 52/242 (21%), Positives = 95/242 (39%), Gaps = 5/242 (2%) Query: 18 DKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQ 77 DK++A +LLL L + +A A S +SV+KF +KLG+KG L AL + Sbjct: 21 DKEIAGFLLLNIQKIMSLKLEIIAKSANCSTASVIKFCKKLGFKGLKDLLPALDRNYSYL 80 Query: 78 PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIIL 137 N+I + + K + N + + + V +L+ R I+L Sbjct: 81 NFQKKRYSENKISQKN---QILSKYHLLIMNNLDKIYN-LNYNSMIKFVKLLQKTRHIML 136 Query: 138 TGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNL 197 G G++ FA L K+ ++ D + S + + S++G+ ++ Sbjct: 137 FGKGSNLESINIFANYLSKLQYHIDYHYDFEVQQKWTEKSIDSSVCVFFSFSGMHSIIDE 196 Query: 198 AADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFI 257 ++M ++A TG + L +++ T E SA + L + Sbjct: 197 LVNKMKAKNCIIVAFTGNFESNLYKQSLISFLTFKNEDVL-ENHTSARISFIYLVMQIIN 255 Query: 258 AL 259 L Sbjct: 256 LL 257 >UniRef50_O26351 Uncharacterized protein MTH_249 n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=Y249_METTH Length = 197 Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 71/195 (36%), Gaps = 21/195 (10%) Query: 96 RLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLM 155 + +++ ++ E +L ++ + A + + G G S L+ + FA +LM Sbjct: 4 MEILRNTVQKIAKHAIEAIDKVDEAELEMMISKIMDASSVFIVGTGRSELIGKAFAMRLM 63 Query: 156 KIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGF 215 +GF V D+ A +D L+AIS +G + + LAA+ VG V+A+T Sbjct: 64 HLGFKVHVVGDVTT-----PAIRDEDCLIAISGSGETKTVTLAAETSRSVGATVVAVTAT 118 Query: 216 TPNALQQRASHCLYTIAEEQA--------------TNSASISACH--AQGMLTDLLFIAL 259 + L + + ++ + + + + + D L Sbjct: 119 PESTLTGYSDVVICIPSKTKEPWKYYTSGVLRGEYDDLTPMGTLFEDSTHLFLDGLIAEF 178 Query: 260 IQQDLELAPERIRHS 274 + + + Sbjct: 179 MSILGKREKDLKERH 193 >UniRef50_B0N5S7 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0N5S7_9FIRM Length = 263 Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 45/249 (18%), Positives = 84/249 (33%), Gaps = 23/249 (9%) Query: 21 LADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPES 80 +A YL+ + LS +LA VS S V +F + LG + F K AL + + Sbjct: 30 IAKYLIANHENINSLSISELAKNTNVSISQVSRFVRSLGIESFSDFKEALVYHGEQKRHT 89 Query: 81 PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGI 140 R V +K++ E E ++ + V +I + GI Sbjct: 90 GLQREIIDYR-------VYQKMVTEEITYF---YQNFDESRVDKLVYDFYKYPKIAIFGI 139 Query: 141 GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGV------RRE 194 S A+ + L+ G + + L ++++ + L++ S++G Sbjct: 140 LNSDNGAKELQYNLIGWGKICISYTNFQDQLDFIKSADSNTLIVIFSFSGNYVMKNGYSR 199 Query: 195 LNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDL 254 D + KV IT + + + + N L DL Sbjct: 200 FYHTYDYLKSSKAKVYVITKNNLVQELEYVNEVILVPIKHDLYNYT-------LQCLVDL 252 Query: 255 LFIALIQQD 263 +F+ + Sbjct: 253 IFMKYQKNL 261 >UniRef50_A6VUC5 KpsF/GutQ family protein n=12 Tax=Bacteria RepID=A6VUC5_MARMS Length = 342 Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 40/198 (20%), Positives = 69/198 (34%), Gaps = 2/198 (1%) Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 L + D L + + A+ N +EE Sbjct: 3 LLYDYYLEQRGFMSDLFNLSADSSTHSDILIDSARRTLSTQAQALANLANQVTEEFPKAV 62 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 +L S R I+ G+G SGL+ + A L G + + A + P+D+L+ Sbjct: 63 RMILASKGRTIICGMGKSGLIGKKIAATLASTGTPSFFLHPGEAFHGDLGMIQPEDVLVL 122 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA--EEQATNSASIS 243 IS++G EL + G +A+ G + L + L E N A + Sbjct: 123 ISFSGETEELMRLLPSLKSFGNPSIAMVGNIDSTLAKHCDCVLDLSIDKETCPNNLAPTT 182 Query: 244 ACHAQGMLTDLLFIALIQ 261 + + D L +AL++ Sbjct: 183 STTMTTAMGDALAVALME 200 >UniRef50_C3RLV2 Predicted protein n=2 Tax=Bacteria RepID=C3RLV2_9MOLU Length = 261 Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 43/247 (17%), Positives = 89/247 (36%), Gaps = 5/247 (2%) Query: 15 AQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEAL 74 +D +A ++ + + LS +++A EA +S +SV +F K G++ F A K E Sbjct: 18 NSNDYNIARTIINHIEDIKILSLEKIAEEANISPASVSRFINKAGFESFQAFKYEF-ELF 76 Query: 75 ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARR 134 + + H Q + + E L + A + T +KL E V +L++++ Sbjct: 77 TRDVKMRRIISHTQRFMRTTIENMSESLYVDGLANLRQTKLNLDIDKLKEIVKLLKTSKS 136 Query: 135 IILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGV--R 192 + G +++ A + + +D ++ I Sbjct: 137 VTFIGDSHELADFYTLQLEMLVNDIPAYLINFYEFEKMYLNQLDHNDTIVFIGVYKEWFS 196 Query: 193 RELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLT 252 D K++A L++ A LY + N S + +L Sbjct: 197 DAQKEILDYAKERKIKIIAFVQEED-YLKEYADL-LYVYGIPDSYNDGYYSLPYLNRLLC 254 Query: 253 DLLFIAL 259 ++++ L Sbjct: 255 EMIYFKL 261 >UniRef50_D2Q6J1 Sugar isomerase or sugar amino transferase n=6 Tax=Bacteria RepID=D2Q6J1_9BIFI Length = 183 Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 73/169 (43%), Gaps = 10/169 (5%) Query: 100 EKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF 159 ++++ + + E L + ++ RI G G SG A++FA ++M IG+ Sbjct: 5 NRVLERIVEEIQGVIARMDENDLERAMALITKGSRIYAAGEGRSGFQARSFAMRMMHIGY 64 Query: 160 NAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNA 219 + + + + D+LLAIS +G R A+ +G +V+A+T + + Sbjct: 65 TSYMMGET-----ICPSMREGDVLLAISGSGKTRRTVEDAEAAKNLGVRVIAVTSKSDSP 119 Query: 220 LQQRASHCLYTIAEEQATNSASI---SACH--AQGMLTDLLFIALIQQD 263 L A + + +S SI S+ + + D L + L ++D Sbjct: 120 LASVADAVIVVPGRVKGESSGSIQLLSSLFDQSVHIALDALCLMLSRRD 168 >UniRef50_C8S7V2 6-phospho 3-hexuloisomerase n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8S7V2_FERPL Length = 189 Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 43/192 (22%), Positives = 82/192 (42%), Gaps = 15/192 (7%) Query: 97 LVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMK 156 + K + +EE L+E + ++ A+RI + G G SG VA+ FA +LM Sbjct: 4 EMIYKFFDTVKKFIDQIKADINEENLNELINAIQGAKRIFVMGAGRSGFVAKAFAMRLMH 63 Query: 157 IGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRV-GGKVLAITGF 215 +G+N V + +D+L+AIS +G + + + + G K++AITG Sbjct: 64 LGYNVYVVGET-----VTPRIDKEDVLIAISGSGETTSVVNISKKAKEMIGSKLVAITGN 118 Query: 216 TPNALQQRASHCLYT------IAEEQATNSASISACHAQGMLT--DLLFIALIQQDLELA 267 ++L Q + + E+ + A + L D L L+ + L+ Sbjct: 119 PNSSLAQMSDVVVLIKGKLKNETNEELSQIAPLGTMFELMSLIFLDGLVAELM-RIKNLS 177 Query: 268 PERIRHSEALVK 279 + + A+++ Sbjct: 178 EKDLAERHAVLE 189 >UniRef50_B1C5Y4 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C5Y4_9FIRM Length = 200 Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 25/175 (14%), Positives = 74/175 (42%), Gaps = 3/175 (1%) Query: 92 DDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILT-GIGASGLVAQNF 150 + + V ++++ A+ V +K+ + V + + + ++ G G+S A Sbjct: 4 NMNNKEVLKEMLNREVNAVNNLSKVLDFDKIDKAVEKIANCKGNVIFAGCGSSSTAAFRA 63 Query: 151 AWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVL 210 A + + A+ M+AL D+ + IS +G EL + ++G ++ Sbjct: 64 ANIYNFLYIPSVAINVMNALHGEYGMIREGDIFIPISKSGNTEELVQSIPIAKKLGAYII 123 Query: 211 AITGFTPNALQQRASHCLYTIAEEQAT--NSASISACHAQGMLTDLLFIALIQQD 263 +T + + + + + + ++ + + S+ ++ D++ A+++++ Sbjct: 124 GLTENDNSYIAENSHIAITFNSLKELDDKDMVATSSTTCSSIILDIIGGAVMKKN 178 >UniRef50_B0RAL7 6-phospho-3-hexuloisomerase n=3 Tax=Micrococcineae RepID=B0RAL7_CLAMS Length = 203 Score = 98.5 bits (244), Expect = 2e-19, Method: Composition-based stats. Identities = 46/191 (24%), Positives = 76/191 (39%), Gaps = 12/191 (6%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWK 153 + + EN A + +L E ++R RR+ G G SGL + A + Sbjct: 17 DVATALTLIADENARVARALAEPDLAARLDEAARVIRDGRRVFALGAGRSGLALRMTAMR 76 Query: 154 LMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 M +G +A V + AT A + D+LL S +G + AA VG +++A+T Sbjct: 77 FMHLGLDAHVVGE-----ATSPAIAEGDVLLVASGSGTTAGIVAAAQTAHDVGARIVALT 131 Query: 214 GFTPNALQQRASHCLYTIAEEQATNSASISACHA-------QGMLTDLLFIALIQQDLEL 266 + L A + A + + ++SA +A ++ D +F AL Q Sbjct: 132 TADDSPLADLADVTVLIPAAAKQDHGGTVSAQYAGGLFELSVALVGDAVFHALWQASGLS 191 Query: 267 APERIRHSEAL 277 A E L Sbjct: 192 ADELWPRHANL 202 >UniRef50_C3WG43 SIS domain-containing protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WG43_FUSMR Length = 241 Score = 98.1 bits (243), Expect = 3e-19, Method: Composition-based stats. Identities = 41/235 (17%), Positives = 85/235 (36%), Gaps = 29/235 (12%) Query: 4 LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGF 63 + ++ ++Y L +S++ Y++ + + + + +A S S V+ A+KLGYKGF Sbjct: 9 IYKLGEKYH-LTESEELALKYIVNNFEKSLEIGVRGVAKNCFASTSVVMNLAKKLGYKGF 67 Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLH 123 + L ++ + + + + DD + LI Sbjct: 68 VDMVYRLEFSIKNSLSNSNSLNNYCTNLDDEKLKYFKNLISN------------------ 109 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 + R I + G G SG V + A KLM +G + +L Sbjct: 110 -------TTRPIFIHGTGFSGAVTKYMADKLMVLG---YYSSRSEYMETMEPKYHQKAIL 159 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 L +S +G ++ + ++ ++ TG + + L+ A + Sbjct: 160 LVVSKSGETSQIIMLCEKANLRNVPIVLFTGTSNSTLENLADLTFIIKDSNPIDD 214 >UniRef50_A7MI97 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=A7MI97_ENTS8 Length = 247 Score = 98.1 bits (243), Expect = 3e-19, Method: Composition-based stats. Identities = 48/245 (19%), Positives = 95/245 (38%), Gaps = 39/245 (15%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 L+++++ + +Y+L +S++ +A++ + +SV + +K+GY G+ L+ Sbjct: 29 MNNLSRTERIVYEYILCNIHRLSGISAKMIASQTFTTTTSVNRVCKKMGYSGYTELRYKC 88 Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 L ++P + Q E+ + E L Sbjct: 89 GFPLQTKPHVSDKMSNGQ------------------------------EKDIAELCQQLH 118 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 A+ I L G + + L G + D+H + + LLL +S +G Sbjct: 119 QAQHIYLYARGGTLTSLSYLSRFLSIAGIPHLMLTDVH----QLALINKGTLLL-VSKSG 173 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGM 250 + + A R +V+AIT ++L Q AS T A E A ++S+ +Q Sbjct: 174 ETKAIVEMARNAKRKNIRVMAITRN-NSSLSQVAS---RTWAVEDADEASSLYQRESQIK 229 Query: 251 LTDLL 255 + D + Sbjct: 230 ILDFI 234 >UniRef50_C1I4S5 Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I4S5_9CLOT Length = 270 Score = 98.1 bits (243), Expect = 3e-19, Method: Composition-based stats. Identities = 40/263 (15%), Positives = 90/263 (34%), Gaps = 19/263 (7%) Query: 15 AQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEAL 74 + + +A+ LL D+ ++++ ++A+ VS+S++ KF + +G+ F LK A + Sbjct: 19 SSTYYHIANILLCNYDSIQNMTISEVADLCFVSKSTISKFTRHIGFDDFLELKAA-ASYR 77 Query: 75 ASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARR 134 +++ + N I + E+ + + + K+ E L + Sbjct: 78 SNKSSNYLNYNDNIIGFMEN--HTKEEYVDTIINDLELIKSNIDMNKIEELAKDLIKYDK 135 Query: 135 IILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRE 194 + G+ S A +F KL G + ++ + D L++ + +G + Sbjct: 136 VAAFGLLYSESAAMDFQTKLAYNGKYIISHMHDIKQDEFIKNAKEDTLIIIFTNSGNYIK 195 Query: 195 LNLAAD------EMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 + K++ IT C+ S+ Sbjct: 196 KYQMMQGNINKNVFKQTKAKIVVITANRNMENHPYVDLCIDFQH----------SSEVQT 245 Query: 249 GMLTDLLFIALIQQDLELAPERI 271 + + I + ERI Sbjct: 246 HAILYQVITDFITFKYKKLKERI 268 >UniRef50_Q8TUU0 Predicted sugar phosphate isomerase n=1 Tax=Methanopyrus kandleri RepID=Q8TUU0_METKA Length = 180 Score = 98.1 bits (243), Expect = 3e-19, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 73/185 (39%), Gaps = 7/185 (3%) Query: 93 DPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAW 152 D +R + + + A + ++ L V +R+ R I + G+G +GL+ + FA Sbjct: 2 DRIRKIMRREAEVIEYACNNLPEEDVKKALDLVVEKIRNDRGIFIVGMGRTGLIGECFAV 61 Query: 153 KLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAI 212 +L+++G V +A PDDLL+A+S +G +N AAD G VLA+ Sbjct: 62 RLVQMGARCYVVGHSTE-----RAIKPDDLLIALSVSGNTAFVNYAADVAKDEGADVLAV 116 Query: 213 TGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIR 272 T + + ++A + E + D L ++ + Sbjct: 117 TMNADSKIAEKADVVVVLP--EPEEIILRTFSEMLMLSFLDGFTAQLAKELGVDESDMWE 174 Query: 273 HSEAL 277 + Sbjct: 175 RHAKI 179 >UniRef50_B5S7Q3 Putative uncharacterized protein (Fragment) n=1 Tax=Ralstonia solanacearum RepID=B5S7Q3_RALSO Length = 577 Score = 98.1 bits (243), Expect = 3e-19, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 67/223 (30%), Gaps = 13/223 (5%) Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN----SEEKLHECVT 127 + E V H P R +K I E A+ TL + Sbjct: 231 HDHLVEREVKVVEAHAAAVELGPYRHFMQKEIFEQPRALGDTLEGVQGFAPDLFGPRAAE 290 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAIS 187 +L +++ G S + L I V +P+ L++ IS Sbjct: 291 VLSKVDSVLILACGTSYYSGCTAKYWLESIAKIPTQVEVASEYRYRDTVPNPNALVVVIS 350 Query: 188 YTGVRRELNLAADEMLRVGGK-VLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 +G + A +G LAI +A+ + T A AS A Sbjct: 351 QSGETADTLAALRHARELGHTHTLAICNVATSAMVRETELKFLTRA-GTEIGVASTKAFT 409 Query: 247 AQGMLTDLLFIALIQQDL-------ELAPERIRHSEALVKKLV 282 Q +L + +Q E A +RH + + ++ Sbjct: 410 TQLAALYMLALTFAKQRGLLNAQQEEDALRHLRHLPSALNAVL 452 >UniRef50_B1LR09 Sugar isomerase, KpsF/GutQ family n=21 Tax=Bacteria RepID=B1LR09_ECOSM Length = 198 Score = 97.7 bits (242), Expect = 3e-19, Method: Composition-based stats. Identities = 26/173 (15%), Positives = 67/173 (38%), Gaps = 2/173 (1%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWK 153 L + + ++ A+ ++ E + + +++ G+G SG++A+ A Sbjct: 5 DLIHLIKHFMRNEHKAVEEVIDSPLSEVANLIKVLQSCQGKVVFIGVGKSGIIARKLAAT 64 Query: 154 LMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 G + V A+ + + DD+++ IS +G E+ + ++G +++ T Sbjct: 65 FASTGTPSFFVHGTEAVHGDLGMVAKDDVVILISNSGETAEILATLPSLKKMGNYLISFT 124 Query: 214 GFTPNALQQRASHC--LYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDL 264 ++L + +E A + ++ D + +AL + Sbjct: 125 RSHHSSLAISCDLSVEIPVKSEADNLGLAPSCSSTVVLVVGDAVALALSELKK 177 >UniRef50_C1ZGN7 KpsF/GutQ family protein n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZGN7_PLALI Length = 391 Score = 97.7 bits (242), Expect = 4e-19, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 64/180 (35%), Gaps = 4/180 (2%) Query: 100 EKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILT-GIGASGLVAQNFAWKLMKIG 158 ++++ A+ V L + R ++ GIG +GL+ Q L G Sbjct: 34 REILRTEGQALLDLSRRLDAS-FCAAVEYLSNTRGAVIVTGIGKAGLIGQKITATLCSTG 92 Query: 159 FNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPN 218 A + AL + PDD++LA S +G EL G V+++T + Sbjct: 93 SRAYFLHPTEALHGDLGCVGPDDVILAFSNSGETAELLALLPIFEARGIPVVSVTASPVS 152 Query: 219 ALQQRASHCLYTI--AEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 L + + + E A ++ A + D L ++ A + R A Sbjct: 153 TLGRASQVVVTMGRLHECGVQGLAPSTSTTAMLAIGDALAFVTCKRRSFSARDFARLHPA 212 >UniRef50_A6DIX0 Glucosamine-fructose-6-phosphate aminotransferase n=2 Tax=Bacteria RepID=A6DIX0_9BACT Length = 610 Score = 97.7 bits (242), Expect = 4e-19, Method: Composition-based stats. Identities = 43/274 (15%), Positives = 80/274 (29%), Gaps = 31/274 (11%) Query: 22 ADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESP 81 + ++ D +L+ LA K G F L L + E Sbjct: 198 INAIVQHTDRVVYLNDGDLA------------IVNKEGIS-FHDLTLK----SVQRDEEK 240 Query: 82 SVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK-------LHECVTMLRSARR 134 + + + +++ + A + + LH L S R Sbjct: 241 ITHSAEEAQKGGFSTFMMKEIHDQPRAVRNSVRGHLDFDNATTSLGGLHMNPKELASIDR 300 Query: 135 IILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRE 194 I L G S A + + V + L +A+S +G + Sbjct: 301 IQLFACGTSLNAALLGQYFFEDLVGIPCQVTQAADFRYRNPIIEKNTLAIALSQSGETAD 360 Query: 195 LNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDL 254 A E R G ++AI + + + A +Y A + AS A Q + Sbjct: 361 TLAAVHEAKRKGADLIAICNAVGSTIAREAGRGVYLHA-GPEISVASTKAFTTQVSVLLQ 419 Query: 255 LFIALIQQDL------ELAPERIRHSEALVKKLV 282 L I L + + I +++++ Sbjct: 420 LAILLGRTKRLDRGQAADILKAIDQLPEQIEEVL 453 >UniRef50_Q723E8 SIS domain protein n=15 Tax=Firmicutes RepID=Q723E8_LISMF Length = 200 Score = 97.7 bits (242), Expect = 4e-19, Method: Composition-based stats. Identities = 27/173 (15%), Positives = 57/173 (32%), Gaps = 5/173 (2%) Query: 93 DPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAW 152 D + ++ + T + + + +I++ G G SG+ A+ Sbjct: 8 DNIHQTWQEEANAISRLPEVTSEEALVKTVEKIAEC---TGKIVVAGCGTSGVAAKKLVH 64 Query: 153 KLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAI 212 I A + A+ T+ +D+L+ IS G EL G ++ + Sbjct: 65 SFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGV 124 Query: 213 TGFTPNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQD 263 T + + + A E N + ++ A D + + L+ Sbjct: 125 TENPDSVIAKEADIFFPVSVSKEPDPFNMLATASTMAVIASFDAVIVCLMTYM 177 >UniRef50_B5G8P1 Transcriptional regulator (Fragment) n=1 Tax=Streptomyces sp. SPB74 RepID=B5G8P1_9ACTO Length = 227 Score = 97.7 bits (242), Expect = 4e-19, Method: Composition-based stats. Identities = 45/192 (23%), Positives = 78/192 (40%), Gaps = 4/192 (2%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + IR R GL+ ++ ++A +L + LS ++A A + SSVV+ Q+L ++ Sbjct: 11 DLAAHIRSRLSGLSGAEARVAHTVLDLGERLVGLSVSEVAALAETAPSSVVRTCQRLEFR 70 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 GF LK+A + P L + A+ + Sbjct: 71 GFQELKIAAARQAPHPPGPADGFGDAADPAARALASTL----AASREALDGLRTTLPPAR 126 Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 L E +L A R+++ G G S V + A++L +G A D + + Sbjct: 127 LGEAARLLHGASRVLVVGAGLSRPVVADTAYRLRAVGRVVDAPADPLTAQLSAGLLTDTS 186 Query: 182 LLLAISYTGVRR 193 + LA+S+TG R Sbjct: 187 VCLAVSHTGATR 198 >UniRef50_C5A3S6 Glucosamine--fructose-6-phosphate aminotransferase, sugar isomerase (SIS) domain (GlmS) n=1 Tax=Thermococcus gammatolerans EJ3 RepID=C5A3S6_THEGJ Length = 338 Score = 97.7 bits (242), Expect = 4e-19, Method: Composition-based stats. Identities = 28/182 (15%), Positives = 68/182 (37%), Gaps = 6/182 (3%) Query: 101 KLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFN 160 +I+ A + L E + RR+I G G+S + L+K Sbjct: 6 NMIRSIRETPQALDSALKI--LKEWDPPEKGFRRVIFIGCGSSYFSSLAGNHVLLKSSIE 63 Query: 161 AAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNAL 220 + A +L + + L++A S +G E+ A G ++ +T + + Sbjct: 64 SHAFPASEFMLHY-RELAKGALVVASSRSGKTGEVIEAVKVAREKGATIIGVTCNENSKI 122 Query: 221 QQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ + + E+ N + + A ++ + + L+ + E + + V++ Sbjct: 123 EEVSDETIAIPNGEEP-NIPATKSFSAITLVLQGIALKLLGR--EEGLNELMAIQQAVER 179 Query: 281 LV 282 ++ Sbjct: 180 VL 181 >UniRef50_D1Y338 Arabinose 5-phosphate isomerase n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y338_9BACT Length = 340 Score = 97.7 bits (242), Expect = 4e-19, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 58/153 (37%), Gaps = 3/153 (1%) Query: 121 KLHECVTMLRSARRIILT-GIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 +L +L + + I+ GIG +G + + A L +G + ++ A + Sbjct: 47 ELVRAARLLEACKGRIVVSGIGKAGHIGRKIAATLSSLGTPSFFLQASEAAHGDLGMVRH 106 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY--TIAEEQAT 237 +D+ L IS +G E+ R+G V+A++G + L A L E Sbjct: 107 EDVALLISNSGKTAEVVALLPFFRRIGAPVIAVSGDAASPLALGADIFLNSAIEREADPL 166 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPER 270 N A S+ Q + D L + + Sbjct: 167 NLAPTSSTTLQLAIGDALGAMVTLLRGLKKEDF 199 >UniRef50_B1L733 Glucosamine 6-phosphate synthetase n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L733_KORCO Length = 597 Score = 97.7 bits (242), Expect = 4e-19, Method: Composition-based stats. Identities = 37/237 (15%), Positives = 68/237 (28%), Gaps = 18/237 (7%) Query: 25 LLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVP 84 LL L +LA V+ + G E +A + + V Sbjct: 196 LLHLTKEFIFLEDGELAEIT----PGDVRIWRGDG------------ELVAIERRAEVVD 239 Query: 85 IHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK-LHECVTMLRSARRIILTGIGAS 143 Q K I E M + K E + + + + G S Sbjct: 240 WSPQQMEKGRYEHFMLKEINEQPYIMMKIADTIEYYKKFSERLESALKSGSLSIVAAGTS 299 Query: 144 GLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEML 203 + L + + V + + D++LAIS +G ++ A Sbjct: 300 MHAGLIGKFYLSTLAGFGSDVIIASEFPEWSRHIANGDVILAISQSGETADVLEAVRIAR 359 Query: 204 RVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALI 260 G KV +I + L + + ++ A A+ AQ ++ + Sbjct: 360 DRGAKVFSIVNVPGSTLTRLSDEYVFIQA-GPEVGVAATKTFTAQVASLYVISSLIS 415 >UniRef50_D2RHI3 6-phospho 3-hexuloisomerase n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RHI3_ARCPR Length = 212 Score = 97.4 bits (241), Expect = 5e-19, Method: Composition-based stats. Identities = 39/192 (20%), Positives = 80/192 (41%), Gaps = 15/192 (7%) Query: 97 LVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMK 156 + + + + + +K+ E ++ L +AR I + G G SG VA+ FA +LM Sbjct: 27 ETLIRFLDKVCEHVQNIKSNLDFKKIEEFISALENARCIFVMGAGRSGFVAKAFAMRLMH 86 Query: 157 IGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLR-VGGKVLAITGF 215 +G+N V + P+DLL+AIS +G + + +G K++AIT Sbjct: 87 LGYNVYVVGET-----VTPRIKPEDLLIAISGSGETLSVVNISRRAKEDIGSKLVAITQR 141 Query: 216 TPNALQQRASHCLYTIAEEQATNSASISACHA--------QGMLTDLLFIALIQQDLELA 267 + L + + + +++ + +S + D L ++ +L Sbjct: 142 PESTLAKMSDIVIVLKGKDKYERNHELSKLAPLGTLFELTALIFLDGLVAEIMN-LKQLT 200 Query: 268 PERIRHSEALVK 279 E + A+++ Sbjct: 201 EEDLAERHAVLE 212 >UniRef50_C2DAE3 3-hexulose-6-phosphate isomerase n=7 Tax=Enterococcus RepID=C2DAE3_ENTFA Length = 197 Score = 97.4 bits (241), Expect = 5e-19, Method: Composition-based stats. Identities = 36/187 (19%), Positives = 68/187 (36%), Gaps = 14/187 (7%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG 158 + + A + ++ V ++ A I L G G SG+ + FA +LM IG Sbjct: 14 MKNYTLDILAELTQNGQRIDTNEIAHFVEQIKQANHIFLNGAGRSGIAIRAFANRLMHIG 73 Query: 159 FNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPN 218 F+ + V ++ S P DLL+ S +G L A++ + G + +T + Sbjct: 74 FSVSIVGEIS-----SPHSKPGDLLIICSGSGETGSLKSLAEKAKQSGIDLALVTMKKES 128 Query: 219 ALQQRASHCLYTIAEEQATNSASISAC-------HAQGMLT--DLLFIALIQQDLELAPE 269 + Q A L + N ++ Q D + + L+ + E + Sbjct: 129 TIGQLADVVLVLPGTTKEENDRETASFAQPMGSAFEQLAFLTFDGMVLNLMDELGETSET 188 Query: 270 RIRHSEA 276 + Sbjct: 189 MFKRHAD 195 >UniRef50_Q1QAN2 KpsF/GutQ family protein n=2 Tax=Psychrobacter RepID=Q1QAN2_PSYCK Length = 330 Score = 97.0 bits (240), Expect = 6e-19, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 64/170 (37%), Gaps = 2/170 (1%) Query: 103 IKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAA 162 I AA+ + C +L R+++TG+G SGL+ + A G + Sbjct: 21 INTEKAALALLTEQIDDRFAQACDIILACQGRVVVTGMGKSGLIGRKIAATFASTGTPSF 80 Query: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222 + A + D+LLAIS +G E+ + + + +++I+ L Sbjct: 81 FMHPGEAGHGDLGMLVKGDVLLAISNSGESDEIKMLLPVVKHLNIPLISISRDKRGMLPH 140 Query: 223 RASHCLYT--IAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPER 270 A L E N A S+ A L D L +AL+ + + Sbjct: 141 AADIILTLGKSQEACPLNLAPTSSTTATLALGDALAVALVHARNFTSEDF 190 >UniRef50_C4X1H8 Putative uncharacterized protein n=3 Tax=Klebsiella pneumoniae RepID=C4X1H8_KLEPN Length = 249 Score = 97.0 bits (240), Expect = 6e-19, Method: Composition-based stats. Identities = 48/242 (19%), Positives = 94/242 (38%), Gaps = 11/242 (4%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + ++++ + + + ++A ++L S +LA AGVS +++ +FA+ +G Sbjct: 3 MDIVGQLQEGMRRFSAQESRVATFILQNLSFTASASIDELAASAGVSPATITRFARSVGC 62 Query: 61 KGFPALKLALSEALASQPES-PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 L+ L++A + + D L +G L ++ A Sbjct: 63 DDIRDLRKQLAQASERRASWLTPDSAALPVAWRDKLSSLGVTLTRQLGHTAEA------- 115 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMK-IGFNAAAVRDMHALLATVQASS 178 + +C + L SAR + +GA + + G +D + T + Sbjct: 116 -AVEKCKSRLLSARAVHCFALGAQDVTLAALLQHQLLPSGIAINLCQDAALMRLTASTLN 174 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 D LLL ++ L A + G ++A+T +AL AS L A+ Q Sbjct: 175 DDHLLLVLATAEANPVLQSATLQARTQGVTIIALT-PEQHALGDMASAILPLPADPQQAR 233 Query: 239 SA 240 A Sbjct: 234 YA 235 >UniRef50_A4FI47 Transcriptional regulator, RpiR family n=2 Tax=Pseudonocardineae RepID=A4FI47_SACEN Length = 303 Score = 97.0 bits (240), Expect = 6e-19, Method: Composition-based stats. Identities = 63/279 (22%), Positives = 111/279 (39%), Gaps = 11/279 (3%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 R+ +R GL + + LL QP A + S+ + A AGV+ ++V + AQ LG+ G Sbjct: 26 LRDRVPER--GLRPKGAAVLEVLLTQPRRASYASAAEAAELAGVNVATVSRTAQALGFTG 83 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 + L+ L S +P V ++ +G ++ + +M + + Sbjct: 84 WVDLQQELRARYLSSLSAPEVAAAHR-----TEGELGAASLRRDLESMAVLSRRLDDGLV 138 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + +ARR ++ G+ V + G+ A+ VRD L +V P D+ Sbjct: 139 RTIAEAIAAARRTLIVANGSYVAVGSALGHNVGLAGYQASVVRDDADLANSVSRLEPGDV 198 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 L+AIS+ + + AA+E G +V +T AL + A + AE A Sbjct: 199 LVAISFWRLYQSTVTAAEEASSRGARVFVLTDAASPALVEAAEQVVLIPAE----GVAFF 254 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + + L D E I +EA + Sbjct: 255 PSLAPGMAVAQAIVAHLSTVDPERTRRSIEAAEAQWARF 293 >UniRef50_A1RZ63 Glutamine amidotransferase, class-II n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RZ63_THEPD Length = 609 Score = 97.0 bits (240), Expect = 6e-19, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 61/169 (36%), Gaps = 2/169 (1%) Query: 81 PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGI 140 + + + + + + I E ++ TL+ ++ L ++ A + + Sbjct: 237 QPLHLDPSLVEKNGYKHHMLREIYEVPESLMRTLSSVQKKYLQLAARLVTGADNVYIIAN 296 Query: 141 GASGLVAQNFAWKLMKI-GFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAA 199 G S ++ ++ G N V L ++ P L+LAIS +G ++ + Sbjct: 297 GTSLHAGMVASYYFSELVGVNPVVVSAAEFPLYYLENIGPGSLVLAISQSGETGDVLSSL 356 Query: 200 DEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 E G +L IT + + L + ++ L A + + Sbjct: 357 YEAKLRGATILGITNYVGSRLARLSNLYLPIAA-GPELAVPATKTFTST 404 >UniRef50_Q4J6D9 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=3 Tax=Sulfolobaceae RepID=GLMS_SULAC Length = 590 Score = 97.0 bits (240), Expect = 6e-19, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 78/197 (39%), Gaps = 6/197 (3%) Query: 85 IHNQIRGDDPLRLVGEKLIKENTAAMYATLNVN--SEEKLHECVTMLRSARRIILTGIGA 142 + + K I E+ ++ T++ + + + + ++S+ RI++ G G Sbjct: 244 WDVETASKEGYPHFMIKEIHESPKSIRDTVDSLISDLDLIDKIIAEMKSSGRIVVVGAGT 303 Query: 143 SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEM 202 S F+ L + G N+ + + DDL+ AIS +G +L A + Sbjct: 304 SYHAGLYFSLLLSREGMNSFPLIASE---YYNFKAKKDDLIFAISQSGETLDLLQAVRKF 360 Query: 203 LRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQ 262 G +++++T +AL + +++ +Y A + A+ Q + ++ L + Sbjct: 361 KEEGARIVSLTNVIESALARESNYKIYMRA-GPEISVAATKTFITQLISLLFIYSRLRRD 419 Query: 263 DLELAPERIRHSEALVK 279 + E ++ Sbjct: 420 NTNKFRGADTEVERVIS 436 >UniRef50_C9AU51 Predicted protein n=2 Tax=Enterococcus casseliflavus RepID=C9AU51_ENTCA Length = 268 Score = 97.0 bits (240), Expect = 7e-19, Method: Composition-based stats. Identities = 39/247 (15%), Positives = 91/247 (36%), Gaps = 15/247 (6%) Query: 18 DKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQ 77 + +LA + L + + Q+A E VS++S+ +FA++LGY+ F +K + Sbjct: 25 EFELAKFFLENFKSVTRWNIYQIAEEQHVSRASIRRFAKQLGYENFLDMK---------K 75 Query: 78 PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIIL 137 N+ KL T+ M + +++ V ++ +R +++ Sbjct: 76 NAETFDDGINEFLRFYGYPNFLTKLQDNITSLMEELSLRFNTQEVDRLVRLINDSREVMI 135 Query: 138 TGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNL 197 + F +++ G + L ++ D L++ S +G+ ++ Sbjct: 136 LCSSNITGSVKTFQQRMVIFGKRITLLTSKSDLTLALEHY-QDPLIIVFSLSGL--FVSS 192 Query: 198 AADEMLRVGGKVLAITGFTPNALQQRAS--HCLYTIAEEQATNSASISACHAQGMLTDLL 255 + + V + T + + L + E+ N + + + DLL Sbjct: 193 MLEILKEVKAPTILFTNNRNPIYNRYFDKLYHLSSQTHEKEINEL-LYYTYGIDFVLDLL 251 Query: 256 FIALIQQ 262 F + + Sbjct: 252 FNGYLLK 258 >UniRef50_Q028G3 Glutamine--fructose-6-phosphate transaminase (Isomerizing) n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q028G3_SOLUE Length = 347 Score = 96.6 bits (239), Expect = 7e-19, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 66/186 (35%), Gaps = 4/186 (2%) Query: 95 LRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKL 154 + + E++ ++ A + + + R R ++L G S A + L Sbjct: 1 MSRMLEEIRQQPEALERTLSAELKRVEKFKRLVEKRRPRMVVLVARGTSDNAALFGRYLL 60 Query: 155 M-KIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213 G + A L + D L++AIS +G + NL + G L IT Sbjct: 61 EITTGIPVSLAAPSIATLYQAKVDYRDALVVAISQSGESTDTNLVLERAREQGALTLGIT 120 Query: 214 GFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRH 273 + + L A H + A + + A+ Q + LL AL + + E + Sbjct: 121 NESGSTLANLAEHVILVRA-GREKSVAATKTYTGQMLAMYLLAYALGGR--AVRTEDLER 177 Query: 274 SEALVK 279 LV Sbjct: 178 IPELVN 183 >UniRef50_Q8RD35 N-acetylmuramic acid 6-phosphate etherase n=9 Tax=cellular organisms RepID=MURQ_THETN Length = 306 Score = 96.6 bits (239), Expect = 8e-19, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 69/224 (30%), Gaps = 25/224 (11%) Query: 83 VPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNS--EEKLHECVTMLRSARRIILTGI 140 + + +K+ +E+ A V E + V ++ R+I G Sbjct: 11 RNPNTMDIDRLSTVDMLKKINEEDKKVPLAVEKVIPSIAEAIDRIVPRMKKGGRLIYVGA 70 Query: 141 GASGLVA-QNFAWKLMKIGFNAAAVRDM---------------------HALLATVQASS 178 G SG + + + G + V + + Sbjct: 71 GTSGRIGILDASECPPTFGVDPGLVVGIIAGGDSAIRNAIESAEDDVEGGRQDLVNINLT 130 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL-YTIAEEQAT 237 D ++ IS +G + A VG + + ++ + + E Sbjct: 131 ERDSVIGISASGRTPYVIGALRYAKEVGALTIGLFCNENKNVENIVDVMITPIVGPEVIM 190 Query: 238 NSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 S + A AQ ++ +++ ++ + ++ + +A +KL Sbjct: 191 GSTRMKAGTAQKLVLNMISTGVMIKLGKVYSNLMVDLQASNEKL 234 >UniRef50_D0ALV4 Transcriptional regulator (Fragment) n=2 Tax=Enterococcus faecium RepID=D0ALV4_ENTFC Length = 192 Score = 96.6 bits (239), Expect = 9e-19, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 76/180 (42%), Gaps = 9/180 (5%) Query: 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71 L+++++ L +++ + S +L+ +A VS +++V+ +K GY+GF + K L Sbjct: 3 HKLSETEQYLWNFIEHLILEIPNYSIVKLSEQANVSTATIVRTMKKKGYEGFTSFKHHLK 62 Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS 131 E + D + + I +N + T+N+ + + + ++ Sbjct: 63 E---------GENKNINFSFLDKVDKGIRRAILKNEQEVVRTINMLEIGNIEDAIQRIKF 113 Query: 132 ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGV 191 A R+ + G S ++ Q KL G N D + + + + D ++ +S G Sbjct: 114 ADRVFVFARGFSEMIGQEMLVKLQLTGKNCQMHTDPEIIKSISRKLTKKDSVIFVSLNGE 173 >UniRef50_D1CIK3 Glutamine--fructose-6-phosphate transaminase (Isomerizing) n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CIK3_THET1 Length = 346 Score = 96.6 bits (239), Expect = 9e-19, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 59/182 (32%), Gaps = 10/182 (5%) Query: 100 EKLIKENTAAMYATLNVNSEEKLHE---CVTMLRSARRIILTGIGASGLVAQNFAWKLMK 156 ++E + L+ E +L + +++ G+S A + Sbjct: 4 NTFLEEEIYSQPKVLSSLLEWELERVEGITGEIPEFNYVVIAARGSSDHAATYAQYVWSS 63 Query: 157 I-GFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGF 215 + GF A L L++ +S +G ++ +E R G LAIT Sbjct: 64 LAGFPVALATPSLYTLYQTPPRLDGALVVGVSQSGQSPDIVAVLEEGRRQGRPTLAITNA 123 Query: 216 TPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 + L A + A + A+ AQ L +AL+ + + + Sbjct: 124 PDSPLANTADWVIPIHA-GPERSVAATKTYTAQL-----LVMALLGALWSGSRTHLEEVK 177 Query: 276 AL 277 + Sbjct: 178 QI 179 >UniRef50_UPI0001C35662 hypothetical protein ChatD1_20770 n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35662 Length = 260 Score = 96.2 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 37/265 (13%), Positives = 99/265 (37%), Gaps = 14/265 (5%) Query: 2 NGLLRIRQRYQGL-AQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 + I+ + +++ +A ++ D S QQ+A+ S +++ +F +KL + Sbjct: 9 SITRLIQIVNDNMANETEWDIAVQMIKHMDEIPGASIQQVADICHCSIATISRFVKKLNF 68 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 + F + L+ L + P+ + E ++ + S + Sbjct: 69 ENFSTFRYKLAMDLFNSPKLNLKMPGEYQI---DYAELKENYLETVKTQIDELEKGLSLD 125 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 ++ V +L +A I++ G A F L G + V+ + + + Sbjct: 126 EIERAVELLHAAETILIYSHGDLDFHA--FQVDLAMHGKASWHVKGYSEMKKALDTLHDN 183 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +++A ++ + + + +G K++ ++ + N ++ A E + Sbjct: 184 TVVIAPLFS--TQNGRQNVEMLHNLGIKMIIVSRGSVNVYEKYADAFFRIRMSETKMDD- 240 Query: 241 SISACHAQGMLTDLLFIALIQQDLE 265 + +L D+L + ++ +E Sbjct: 241 -----YLIHLLFDILSMHYRKRYME 260 >UniRef50_A8MC94 Glutamine amidotransferase class-II n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MC94_CALMQ Length = 595 Score = 96.2 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 68/193 (35%), Gaps = 2/193 (1%) Query: 68 LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 S +P + K I E + +NV E L + + Sbjct: 223 YDASSMSKVEPSPQLASQTTVEVVKGSFQHYMIKEIYEEPEVLARAVNVLQREYLDDAAS 282 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIG-FNAAAVRDMHALLATVQASSPDDLLLAI 186 ++ A+ II TG G S + + L ++G A A+ V+ P L++AI Sbjct: 283 IVAKAKNIIFTGSGTSYYASLIGKYYLEELGGVKADAIPAGEFPYLGVRYVEPGTLIIAI 342 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S +G ++ R G VL+I +AL + ++ L A + + Sbjct: 343 SQSGESTDIIRTIRWAKRKGAIVLSIVNRLGSALMRESNVYLPMGA-GPELAVPATKSFV 401 Query: 247 AQGMLTDLLFIAL 259 A + L A+ Sbjct: 402 ASIAIMLQLAYAV 414 >UniRef50_B9KZ32 Glucosamine--fructose-6-phosphate aminotransferase, isomerizing n=3 Tax=Bacteria RepID=B9KZ32_THERP Length = 603 Score = 96.2 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 68/224 (30%), Gaps = 17/224 (7%) Query: 74 LASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR 133 + + K I E + + + ++R + Sbjct: 241 QRRSARWEPLTLRPADTSLGGYPHYLIKEIHEQPRVLARIARERLDGA-RQLADLIRHSY 299 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRR 193 L G G +G A ++ +I + L++A++ +G Sbjct: 300 GTFLVGCGTAGYAALCGSYLFSRIARRHVNAVIASEFKYQEHFLTDRSLVIALTQSGETI 359 Query: 194 ELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGML-- 251 ++ A R G V A+ T + + + A + A + S A A+ + Sbjct: 360 DVIEAVHAAKRRGATVAALVNVTGSTVARLADFTIPLSA-GPEQSVLSTKAYTAKLAILL 418 Query: 252 -------------TDLLFIALIQQDLELAPERIRHSEALVKKLV 282 D L+ A+ ++ LAP + A+ +LV Sbjct: 419 LTAHILNGSEHVGLDTLWRAIEGMEMALAPATLDRIRAVADRLV 462 >UniRef50_A2SR80 Glutamine--fructose-6-phosphate transaminase n=5 Tax=Methanomicrobiales RepID=A2SR80_METLZ Length = 580 Score = 96.2 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 66/193 (34%), Gaps = 5/193 (2%) Query: 82 SVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIG 141 + R K I E A TL+ E V ++ AR I + G Sbjct: 230 EIEWSGDEVRKGGFRHFMLKEIYEQPDAFANTLSSVKRCS--EIVDSIKKARSITVVACG 287 Query: 142 ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADE 201 S + F++ + + V + DL++ +S +G + A Sbjct: 288 TSANASLVFSYLMESVCHIPTRVVLGSEFKYFPTPGT--DLVIGVSQSGETADTIAALKL 345 Query: 202 MLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQ 261 +G + +A+T +++ + AS LYT A + A+ + +Q + L Sbjct: 346 AKSLGAQTIAVTNVLGSSITRVASSVLYTRA-GPEISVAATKSFISQVAAFMQIVNLLTD 404 Query: 262 QDLELAPERIRHS 274 LE +R Sbjct: 405 HSLEAELAEVRRY 417 >UniRef50_C8WES2 KpsF/GutQ family protein n=3 Tax=Zymomonas mobilis RepID=C8WES2_ZYMMN Length = 336 Score = 96.2 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 39/167 (23%), Positives = 66/167 (39%), Gaps = 2/167 (1%) Query: 100 EKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF 159 +I AM+ + +L + RII++GIG SG V + A L G Sbjct: 27 RNVILSEATAMHHLAASIGVDFAKAVSMLLETRGRIIVSGIGKSGHVGRKIAATLASTGS 86 Query: 160 NAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNA 219 +A + A + D+L+AIS++G REL + V+ IT + Sbjct: 87 SAFFIHPAEAAHGDLGMMMNGDILIAISFSGRTRELLPMISYAQTLQVPVIVITSQKGDV 146 Query: 220 LQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDL 264 L + A+ L E N A ++ L D L +++++ Sbjct: 147 LPKEATLSLRLPELKEACPANIAPTTSTTLTMALGDALAVSMMRHRG 193 >UniRef50_C6XG05 Polysialic acid capsule expression protein n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XG05_LIBAP Length = 341 Score = 96.2 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 3/147 (2%) Query: 120 EKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 + H V +++ + R+++TGIG SG + A L G + V A + + Sbjct: 51 FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA--EEQA 236 DDL++ +S++G EL R ++AIT + + A L E Sbjct: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP 170 Query: 237 TNSASISACHAQGMLTDLLFIALIQQD 263 A ++ Q + D L IAL++ Sbjct: 171 HGLAPTTSAIMQLAIGDALAIALLESR 197 >UniRef50_C9D0H7 Putative transcriptional regulator RpiR family protein n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9D0H7_9RHOB Length = 319 Score = 96.2 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 90/246 (36%), Gaps = 14/246 (5%) Query: 40 LANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVG 99 +A +AGVS+ +V +F ++LGYKG LK AL + S PS+ G Sbjct: 79 VAAKAGVSEITVSRFLKRLGYKGISGLKEALRTEMTSALLEPSLRSERLKEGS------L 132 Query: 100 EKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF 159 + ++ A E + L ARR+ +TG VA++FA +L + Sbjct: 133 SGFLTSEAESLLALAQQMETENWTRMIATLDQARRVYVTGFQTVSGVAEDFAKRLNIVRS 192 Query: 160 NAAAVRDMH----ALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGF 215 + V + + D+L+ + RE + + G V+ IT Sbjct: 193 SVHFVSANSGGLVEWVDAGRDDYRQDVLIVVDIVPFAREAIQISRLAQKTGMTVVVITDE 252 Query: 216 TPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 N + + + + L + + A+ Q+D E R + Sbjct: 253 FNNWAYDYTDYVFHGRTKTGLF----LETTAPLVTLQNFIVHAVAQKDPERTQHRRAEWQ 308 Query: 276 ALVKKL 281 + + +L Sbjct: 309 SYLSEL 314 >UniRef50_C6QLS8 6-phospho 3-hexuloisomerase n=2 Tax=Geobacillus RepID=C6QLS8_9BACI Length = 187 Score = 96.2 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 77/185 (41%), Gaps = 13/185 (7%) Query: 101 KLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFN 160 + + E + T + ++E+ + V + A++I + G G SG ++++FA ++M +G + Sbjct: 7 QYLGEILQELNRTADFIADEEAEKLVNGILQAKKIFVAGAGRSGFMSKSFAMRMMHMGLD 66 Query: 161 AAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNAL 220 A V + DD+L+ S +G R L A++ +G + +T F + + Sbjct: 67 AYVVGET-----ITPNLEQDDILIIGSGSGETRSLVSMAEKAKSLGATIALVTIFPASTI 121 Query: 221 QQRASHCLYTI------AEEQATNSASISACHAQGMLT--DLLFIALIQQDLELAPERIR 272 + A + A+ + + Q +L D + + +++ + + Sbjct: 122 GKLADITVKLPGSPKDQADNGYKTIQPMGSLFEQTLLLFYDAVILRCMEKKGLDSNTMFK 181 Query: 273 HSEAL 277 L Sbjct: 182 RHANL 186 >UniRef50_D0ZGM2 Sugar isomerase (SIS) n=5 Tax=Enterobacteriaceae RepID=D0ZGM2_EDWTE Length = 206 Score = 95.8 bits (237), Expect = 1e-18, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 67/180 (37%), Gaps = 3/180 (1%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKI 157 + + +A + E+ + + L R +I+++G+G SG+ A+ A L + Sbjct: 8 AQTAWQIYSAELTQLAQRLDAEQWQQLLDRLSGCRGKIMVSGVGTSGIAARKVAHMLACV 67 Query: 158 GFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTP 217 A + A + DDL++ IS G EL + G ++A+T Sbjct: 68 ERPAIYLNATDAAHGDLGFLRGDDLVILISRGGNSEELTRLLPALQAKGVPLIAVTENPR 127 Query: 218 NALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSE 275 +A+ + A L T E N + ++ L D L+Q+ + Sbjct: 128 SAIARAAQLTLATGVQREIDPLNMLATTSIILVLALFDAACACLMQRSGYDRQTLLSVHP 187 >UniRef50_C2KYX2 Glutamine--fructose-6-phosphate transaminase (Isomerizing) n=2 Tax=Clostridiales RepID=C2KYX2_9FIRM Length = 625 Score = 95.8 bits (237), Expect = 1e-18, Method: Composition-based stats. Identities = 33/221 (14%), Positives = 71/221 (32%), Gaps = 12/221 (5%) Query: 69 ALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYAT--------LNVNSEE 120 A++E SQ + + ++V + L+ T S E Sbjct: 238 AIAELDQSQIHKGEYLHFMEKEIFEQPKVVKDTLLYACNQENEETAGNAGNSEYPEFSYE 297 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 + R+ + G++ + V Sbjct: 298 AFSMTEKDFQEISRVRVIACGSAYHAGWVLKSVCESLARVPVQVELASEFRYNHPILEKG 357 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 +L+++IS +G + A E ++G K L+I +A+ + + YT A A Sbjct: 358 ELVISISQSGETADTLAALKEAKKLGAKTLSIVNVKGSAIARESDFVFYTQA-GPEIAVA 416 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + A Q + + L + +++ E + +L ++L Sbjct: 417 TTKAYSCQLAAGYIFSLLLAKAKGKISKE---ETRSLTEEL 454 >UniRef50_Q6ET44 Os02g0158300 protein n=7 Tax=Magnoliophyta RepID=Q6ET44_ORYSJ Length = 344 Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 65/182 (35%), Gaps = 7/182 (3%) Query: 102 LIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILT-GIGASGLVAQNFAWKLMKIGF- 159 L + + + L A + G+G SG+VA+ A L +GF Sbjct: 27 LFGAQRRHLDHFFDRLDLSQAAAFAQALVDAPGAVFFTGVGKSGIVARKLAQTLASLGFT 86 Query: 160 NAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGF---T 216 A + + AL + + P DLL+ +S +G EL A G ++++T Sbjct: 87 RAGFLSPVDALHGDIGSVFPGDLLVLLSKSGASDELLALAPCARAKGAHLISLTSAASGA 146 Query: 217 PNALQQRAS--HCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 L L AE A +++ Q + D + A+++ + + Sbjct: 147 DCPLAAVCDLNVHLPLQAEVCPFGLAPVTSTAIQMVFGDTVVAAIMEARRLSRDQYASNH 206 Query: 275 EA 276 A Sbjct: 207 PA 208 >UniRef50_C2JQK2 Phosphosugar-binding transcriptional regulator n=10 Tax=Enterococcus RepID=C2JQK2_ENTFA Length = 251 Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 42/232 (18%), Positives = 78/232 (33%), Gaps = 37/232 (15%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ + I + L S+ + ++ D + L +++A + VS ++++ A+K+GY Sbjct: 22 MDTEMLIDKY--QLNDSEAAVLRFMDKNRDCLKSLGIREVAKASYVSTTAIINMAKKIGY 79 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G+ L A E E L+ Sbjct: 80 SGYSELVFAY-------------------GNKHSSISFPENFSNEEKDEFIRLLSR---- 116 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +RI++ G G S +A +F+ L GF A A + L D Sbjct: 117 ---------YREKRIMVLGSGFSQNIANHFSEMLNLYGFRATANSHLEFLRE---NVEKD 164 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA 232 L+ +S +G L ++A G + + Q A+ + T Sbjct: 165 VLIFIVSNSGDTLRLAELVKLAKNHHIDLIAFVGEKKSKIGQLATLTISTET 216 >UniRef50_A4INF7 Predicted sugar phosphate aminotransferaseinvolved in capsule formation n=3 Tax=Bacillaceae RepID=A4INF7_GEOTN Length = 183 Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 69/183 (37%), Gaps = 13/183 (7%) Query: 103 IKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAA 162 I+ + + + L A+RI + G G SG + + FA +LM +G Sbjct: 5 IEVIFSEIEQVFAEFDHMSIECVAMRLAKAKRIFVAGEGRSGFMGKAFAMRLMHLGATVY 64 Query: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222 AV + + D L+AIS +GV ++ A++ ++G +V+A+T +AL Sbjct: 65 AVGET-----VTPSLQSGDTLIAISGSGVTKQTVWIAEKAKQLGCEVIAVTTDLSSALAN 119 Query: 223 RASHCLYTIAEEQATNSASISACHA--------QGMLTDLLFIALIQQDLELAPERIRHS 274 AS ++ A + + ++ D + + + + Sbjct: 120 IASLTVHIPAATKYRRGHETQSKQPLGSLFDQCTHLILDAICLQYANNQQVEHQKAFQRH 179 Query: 275 EAL 277 L Sbjct: 180 SNL 182 >UniRef50_Q03Y13 Sugar phosphate isomerase with CBS domains n=6 Tax=Lactobacillales RepID=Q03Y13_LEUMM Length = 320 Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 35/170 (20%), Positives = 65/170 (38%), Gaps = 5/170 (2%) Query: 95 LRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKL 154 +K A+ + + +L + R+I GIG SG++A A Sbjct: 6 YYEDAKKTFDVEIEALTRVKSSLGKSFDEAVDKILSTKGRVIFIGIGKSGIIADKIAASF 65 Query: 155 MKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNL---AADEMLRVGGKVLA 211 +G + + A + S DD+++ IS +G +E+ A + +A Sbjct: 66 SSVGLASFYIDAGTAYHGDLGRVSSDDVVIFISNSGETQEVLQALSALQNIHNNELATIA 125 Query: 212 ITGFTPNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIAL 259 +TG + L + L E+ T A S+ A ++ D L +A+ Sbjct: 126 MTGSEDSTLAKNTDIVLSIDVAEEADITKLAPTSSTTATLVMGDALLVAI 175 >UniRef50_B5YDY2 Glucosamine--fructose-6-phosphate aminotransferase, isomerizing n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=B5YDY2_DICT6 Length = 607 Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 31/221 (14%), Positives = 67/221 (30%), Gaps = 16/221 (7%) Query: 68 LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 L + E VP + K I E + L+ +K Sbjct: 224 YDLKTNNYIEVEPIIVPQDGIRAEKNGYPHFMLKEIFEQPLVVRRILSTLERDKDKFIFE 283 Query: 128 MLRS-------ARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +++ R++ + G G S + K V + + Sbjct: 284 DIKNVDISWEKIRKVFIVGCGTSYHAGYYAKFLWEKELPYFIEVELASQMHHRNLNIPEE 343 Query: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA 240 L + IS +G ++ ++ G KVL++ + + + + + + A A Sbjct: 344 TLFITISQSGETADVISTLRKVKENGFKVLSLVNNPQSTVARESDYFINLRA-GVEIGVA 402 Query: 241 SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + A+ + +LL E R+ + + + K Sbjct: 403 ATKTFMAELVYLELL--------KEYIKSRLYNIKIDLDKW 435 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 19/150 (12%), Positives = 39/150 (26%), Gaps = 8/150 (5%) Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG-FNAAAVRDMHALLATVQASSPD 180 + E R + G + +A A KL +I +A + + P+ Sbjct: 453 VFEVAKKYYHKRNFLYLARGKNFPLALEGALKLKEISYIHAEGIPAGEMKHGPIALLDPE 512 Query: 181 DLLLAISYTGVRRE-LNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 + I Y + +E ++AI L+ + N Sbjct: 513 TPVFGIVYKDETYSKMINNLEEAKARKAPIIAIGNEWDEKLESLVDDLIPVP------NV 566 Query: 240 ASISACHAQGMLTDLLFIALIQQDLELAPE 269 + M+ L + + Sbjct: 567 DPFYYPYMGAMVLQLFAYHVANLLGREIDQ 596 >UniRef50_Q6MA93 Putative Gut Q protein n=2 Tax=Parachlamydiaceae RepID=Q6MA93_PARUW Length = 319 Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 72/181 (39%), Gaps = 3/181 (1%) Query: 98 VGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILT-GIGASGLVAQNFAWKLMK 156 + ++++ + + + V +L + I G+G SGLVA+ A ++ Sbjct: 1 MLKEILDKQHLYTNHYFETLDLIAIEKLVELLLETEKSIFFTGVGKSGLVAKKIALTMVS 60 Query: 157 IGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT 216 G A + A+ + S DD+ + +S +G EL + GG ++A+ Sbjct: 61 TGTKALYLSPTDAVHGDIGIVSQDDIFIMLSKSGESDELLNLVPPIRNKGGILVAVVCNP 120 Query: 217 PNALQQRASHCLYTIAEEQ--ATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 + L + + +E+ + A + QG+ DL+ AL+++ + + Sbjct: 121 QSRLAAACHYVITLPFQEELCPFDMAPTMSTIFQGLFGDLVTAALMRRKNFSLNDYALNH 180 Query: 275 E 275 Sbjct: 181 P 181 >UniRef50_Q1IND2 Sugar isomerase (SIS) n=2 Tax=Acidobacteria RepID=Q1IND2_ACIBL Length = 304 Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 36/242 (14%), Positives = 79/242 (32%), Gaps = 26/242 (10%) Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE--EKLH 123 ++ + A+ P+ + + E + +E+ A V + E + Sbjct: 1 MRYKPANDTANLRTERPNPVSADLDIK-SPLEIVEIINREDQRVAKAVKKVLPQIAEAIA 59 Query: 124 ECVTMLRSARRIILTGIGASGLV-AQNFAWKLMKIGFNAAAVR----------------- 165 + LR R+I G G SG + A + + V+ Sbjct: 60 LVESALRRGGRLIYVGTGTSGRIGALDASECPPTFNTRPEQVQYLIAGGEQALANAVEAS 119 Query: 166 ----DMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQ 221 ++ + D+++ ++ +G A + R G K +AI + L Sbjct: 120 EDSREVGQADMAKRKPGKKDVVIGLAASGRTPYTIAAMEYARRKGSKTVAIVCNPESPLA 179 Query: 222 QRASHCLYTIA-EEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 A + E + S + A AQ M+ +++ + + + + + +K Sbjct: 180 DAADVAIEVEVGPEVVSGSTRMKAGTAQKMICNMITTGALTRLGYVYGNLMVNLHLKNQK 239 Query: 281 LV 282 LV Sbjct: 240 LV 241 >UniRef50_D1RBC9 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1RBC9_9CHLA Length = 609 Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 61/168 (36%), Gaps = 9/168 (5%) Query: 122 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDD 181 ++ V L S RI++ G S A+ L V Sbjct: 284 INFEVNELLSVERILILACGTSWHAGYLAAYMLEDRARIPVQVEISSEFRYKNPVVPAGT 343 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 L +AIS +G + A E+ G KVLAI + L + A ++ A Q S Sbjct: 344 LAIAISQSGETADTLAAVRELKTKGVKVLAICNVEGSHLAREADASIFLKA-GQEIGVCS 402 Query: 242 ISACHAQGMLTDLLFIALIQQD-------LELAPERIRHSEALVKKLV 282 A +Q ++ LF L+ + ++ E ++ V++++ Sbjct: 403 TKAFTSQVVVL-SLFTLLMARMRHMDKKEGQIFLEALQKLPDQVQEIL 449 >UniRef50_D0RRD5 Arabinose 5-phosphate isomerase n=2 Tax=alpha proteobacterium HIMB114 RepID=D0RRD5_9RICK Length = 324 Score = 95.0 bits (235), Expect = 2e-18, Method: Composition-based stats. Identities = 27/180 (15%), Positives = 62/180 (34%), Gaps = 4/180 (2%) Query: 95 LRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKL 154 + G+KLIKE A+ + + + I+ +G+G S L+ + Sbjct: 7 ILSFGKKLIKEEINALIKLHKNLNINFSKAVNLINNTKGNIVFSGVGKSKLILEKTCGTF 66 Query: 155 MKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITG 214 +G + + A ++ +D L+ S +G EL + K++ I+ Sbjct: 67 SSLGVPSYVLDASQATHGSLGNLKNNDTLIIASNSGNTNELIAIFKFAKKYRIKIIGISS 126 Query: 215 FTPNALQQRASHCLYTI----AEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPER 270 + + L + + + + S+ + D L I++ + + Sbjct: 127 NSKSQLFKNSDINIVYPKVKEIGDSNFKLVPTSSTTTLSAIGDALAISVAKLRGFTIRDF 186 >UniRef50_A6M2T4 Transcriptional regulator, RpiR family n=3 Tax=Clostridiales RepID=A6M2T4_CLOB8 Length = 265 Score = 95.0 bits (235), Expect = 2e-18, Method: Composition-based stats. Identities = 38/266 (14%), Positives = 95/266 (35%), Gaps = 28/266 (10%) Query: 1 MNG-LLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLG 59 M + +I Y L+++++++ Y+L D+ + +A S ++++K ++KLG Sbjct: 25 MKFDIYKIADNY-KLSETERQVLQYILTNIDSVLTKGVRDVATINYTSAATIIKLSKKLG 83 Query: 60 YKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE 119 Y G+ + L+ + + + + E I + Sbjct: 84 YTGYVDMIYRLNFIVKNHQNNQEHTSDITSFISEIENKKIEDFISMIIKHREDII----- 138 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 +T G S +A F K++ +GF ++ + Sbjct: 139 ----------------FITATGFSDSIADFFWRKMLVLGFKC--IKTNSYGVYDSNQIG- 179 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL-YTIAEEQATN 238 L++ IS +G + D + ++ TG + N + ++A+ +E Sbjct: 180 GALVIGISKSGETESITKVIDYASKNELDIITFTGKSENHMAKKATLNFMILDDKELDDR 239 Query: 239 SASISACHA-QGMLTDLLFIALIQQD 263 + + + +A ++ + L ++ Sbjct: 240 NLTANYFYARVMIVMEYLLDKVMSNL 265 >UniRef50_C4FAU5 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAU5_9ACTN Length = 646 Score = 95.0 bits (235), Expect = 2e-18, Method: Composition-based stats. Identities = 32/187 (17%), Positives = 56/187 (29%), Gaps = 8/187 (4%) Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATL-------NVNSEEKLH 123 ++ A +P V K I E + TL ++L Sbjct: 261 AQGRAIEPAVTHVDWDVDTAEKGGYPDFMMKEICEQPRVVRDTLVGRLASSGELDIDELG 320 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 L R+ + G S + AV +P L+ Sbjct: 321 LTPEELSLVDRVYVIACGTSYHAGLIAKNLIEGWARIPCAVEAASEFRYRNPIITPSTLV 380 Query: 184 LAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASIS 243 +A+S +G + A + G KV IT + + + + +YT A + AS Sbjct: 381 VAVSQSGETADTLAAIRDARIKGAKVFGITNVVGSPVARESDGVIYTKAN-KEIAVASTK 439 Query: 244 ACHAQGM 250 + Q + Sbjct: 440 SFTGQVV 446 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 25/170 (14%), Positives = 52/170 (30%), Gaps = 10/170 (5%) Query: 99 GEKLIKENTAAMYATLNVNSEE--KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMK 156 L +E ++ + +HE R AR + G G ++ A KL + Sbjct: 467 IRMLFRELGDTAEQIQHILDTQRAAVHEAALACREARSALFVGRGMGSAISCEGALKLKE 526 Query: 157 IG-FNAAAVRDMHALLATVQASSPDDLLLAISY-TGVRRELNLAADEMLRVGGKVLAITG 214 + +A A + ++A++ + + E G ++A+ Sbjct: 527 VSYLHAEAYAAGEMKHGPIALIERGFPVIAVATKSPTYDKTVSNLKECEARGACIIAVAT 586 Query: 215 FTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDL 264 + + A H +Y + I+A LL + Sbjct: 587 EGDEEITRVADHVIYVP--PVRDALSPITATVP----LQLLAREVAVLRG 630 >UniRef50_C9AU43 Putative uncharacterized protein n=3 Tax=Enterococcus RepID=C9AU43_ENTCA Length = 207 Score = 95.0 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 61/144 (42%), Gaps = 2/144 (1%) Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 + +R+ +TG+G VA A +G A + + + D+++AIS +G Sbjct: 47 NHKRVHVTGVGKCSYVAGYAASLFSSVGTPAYFLDTTETVHGSAGQVVAGDVVIAISNSG 106 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL--YTIAEEQATNSASISACHAQ 248 +EL A + G +LA+TG ++L A L Y E + N S+ AQ Sbjct: 107 NTKELEYALAALKANGAVILAVTGNEDSSLASCAEVTLSSYVSQEGDSLNKPPRSSVIAQ 166 Query: 249 GMLTDLLFIALIQQDLELAPERIR 272 + +L + L + + ++ Sbjct: 167 MIQLQVLSVLLQEAKEINLEDYLK 190 >UniRef50_Q9M1T1 Sugar-phosphate isomerase-like protein n=10 Tax=Embryophyta RepID=Q9M1T1_ARATH Length = 350 Score = 95.0 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 69/199 (34%), Gaps = 3/199 (1%) Query: 81 PSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILT-G 139 + + + L K + + + +L S + G Sbjct: 16 HNSLKNGGSSHQEISHDNLLNLFKSQQDLLNHFFKHLDLSQTLDFSRILLSTTGTVFFTG 75 Query: 140 IGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAA 199 +G S VA + L+ + F ++ + + AL + A SP D+L+ S +G EL Sbjct: 76 VGKSAFVANKVSQTLVSLSFRSSFLSPLDALHGDIGALSPRDVLVFFSKSGATEELLRLV 135 Query: 200 DEMLRVGGKVLAITGFTPNALQQRAS--HCLYTIAEEQATNSASISACHAQGMLTDLLFI 257 G ++++T + N L L E N A +++ Q + D + + Sbjct: 136 PCARAKGAFLVSLTSVSGNPLAGVCDMNVHLPLQRELCPFNLAPVTSTAIQMVFGDTIAV 195 Query: 258 ALIQQDLELAPERIRHSEA 276 AL+ E + A Sbjct: 196 ALMAARNLSKEEYAANHPA 214 >UniRef50_A1SQL2 Glutamine--fructose-6-phosphate transaminase n=14 Tax=Actinomycetales RepID=A1SQL2_NOCSJ Length = 610 Score = 95.0 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 89/271 (32%), Gaps = 31/271 (11%) Query: 25 LLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVP 84 ++ T HL +LA GF + L+ S P Sbjct: 195 IVRHTTTVAHLDDGELATVTAT---------------GFTTYRQDLTATAKSATVLDVDP 239 Query: 85 IHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK-------LHECVTMLRSARRIIL 137 D + +++ ++ +AA E L+ R+ RR+ + Sbjct: 240 SSYDAGEHDSF--MRKEMFEQPSAAERVLRGRLDERFGTAHLGGLNLDPRENRAIRRVKI 297 Query: 138 TGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNL 197 G G++ V Q A + ++ A PD L +A+S +G + L Sbjct: 298 LGCGSAYYVGQMGAELVEELARIPADAEAASEFRYRNPIIEPDTLYVAVSQSGETIDTLL 357 Query: 198 AADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFI 257 A E+ R GG+V+ + +A+ + +Y A AS A + LL + Sbjct: 358 AVQEIRRKGGRVVGLVNVVGSAIARECDGGIYLHA-GPEVAVASTKALTNMFLGFALLAL 416 Query: 258 ALIQ------QDLELAPERIRHSEALVKKLV 282 L + D + +++++ Sbjct: 417 QLGRVRDLSIADGRRLIAGLARLPGQIEEVL 447 >UniRef50_C9B1X5 Putative uncharacterized protein n=2 Tax=Enterococcus casseliflavus RepID=C9B1X5_ENTCA Length = 266 Score = 94.7 bits (234), Expect = 3e-18, Method: Composition-based stats. Identities = 42/253 (16%), Positives = 78/253 (30%), Gaps = 14/253 (5%) Query: 23 DYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPS 82 ++L + LA VS SSV +F +K+G++ F LKL + + + Sbjct: 26 KFILCHLKEIHKYNISDLAKACCVSNSSVSRFCRKIGFQNFNELKLQFFQYTNTAEKKFF 85 Query: 83 VPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGA 142 P D I + LH + + + G Sbjct: 86 YPGVQCSNFKDSY-------IDGIIENLLLLKESICVTDLHRLAEDIVNYPNVAAFGSLH 138 Query: 143 SGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVR--RELNLAAD 200 S NF L+ G L ++ + + L++ S G R L Sbjct: 139 SQSAVLNFQTDLLSSGIVMDTRICFQEQLEYMEQADCNTLIVLFSRGGSHLKRFLLHHLQ 198 Query: 201 EMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALI 260 R K++ IT A + +Y +E + +A + +L + + Sbjct: 199 LSKRKRPKIVMITANKNLASNKYIDQFIYYDEKE-----GFTAYPYAVEAIKGVLVLEVY 253 Query: 261 QQDLELAPERIRH 273 + + +R Sbjct: 254 RLVKQKKIINLRK 266 >UniRef50_Q6GES3 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=311 Tax=Firmicutes RepID=GLMS_STAAR Length = 601 Score = 94.7 bits (234), Expect = 3e-18, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 68/212 (32%), Gaps = 8/212 (3%) Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 + + + + V H ++ V ++I+E A + Sbjct: 232 RDSYIAEIDASDAEKGVYAHYMLKEIHEQPAVMRRIIQEYQDAEGNLKIDQDI------I 285 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 ++ A RI + G S L K V + + S L + I Sbjct: 286 NDVKEADRIYVIAAGTSYHAGLVGKEFLEKWAGVPTEVHVASEFVYNMPLLSEKPLFVYI 345 Query: 187 SYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACH 246 S +G + E ++G K L IT + L + A H L A AS A Sbjct: 346 SQSGETADSRAVLVETNKLGHKSLTITNVAGSTLSREADHTLLLHA-GPEIAVASTKAYT 404 Query: 247 AQGMLTDLLFIALIQQDLELA-PERIRHSEAL 277 AQ + +L + ++ A + +R + Sbjct: 405 AQIAVLSILSQIVAKEHGREADIDLLRELAKV 436 >UniRef50_C0R0I7 Glucosamine--fructose-6-phosphate aminotransferase, isomerizing n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0R0I7_BRAHW Length = 608 Score = 94.7 bits (234), Expect = 3e-18, Method: Composition-based stats. Identities = 33/196 (16%), Positives = 61/196 (31%), Gaps = 11/196 (5%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT-------MLRSARRIILTGIGASGLV 146 K I E A+ T+ + + R+ + G G + Sbjct: 247 GYEHFMLKEINEQPKALLDTIEPRIVHGIPDFKRDGIEDESFWTFFDRVYIIGCGTAMHA 306 Query: 147 AQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVG 206 A + + L + IS +G + A + + G Sbjct: 307 AMIGKRLIEDNCRIPVECEIASEFRYKNPILTEKTLSIFISQSGETADTLAALNLVKEKG 366 Query: 207 GKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLEL 266 K LAI +++ + A + +YT A + AS A Q + L+ +I Sbjct: 367 YKTLAIVNVNSSSIARNADYVIYTYA-GPEISVASTKAYSVQMAIMYLITFKIISARKIK 425 Query: 267 APERIRHSEALVKKLV 282 + I+ L+K L+ Sbjct: 426 DNDYIK---ILIKNLL 438 >UniRef50_D1XPK8 Glucosamine/fructose-6-phosphate aminotransferase, isomerizing n=12 Tax=Actinomycetales RepID=D1XPK8_9ACTO Length = 609 Score = 94.7 bits (234), Expect = 3e-18, Method: Composition-based stats. Identities = 43/272 (15%), Positives = 78/272 (28%), Gaps = 33/272 (12%) Query: 25 LLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVP 84 L+ L ++A + +E ++ +V Sbjct: 201 LVAHTRQIVTLDDGEMATLKA------------------DDFRTYTTEGSSTTATPTTVE 242 Query: 85 IHNQIRGDDPLRLVGEKLIKENTAAMYATLN--------VNSEEKLHECVTMLRSARRII 136 + K I E A+ L L+ R RRI Sbjct: 243 WEAESYDMGGHDTYMHKEISEQADAVDRVLRGRIDDRFSTVHLGGLNLDAREARGVRRIK 302 Query: 137 LTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELN 196 + G G S A + ++ A PD L +A+S +G ++ Sbjct: 303 ILGCGTSYHAGLIGAGLIEELARIPADAEPASEFRYRNPVVDPDTLYVAVSQSGETYDVL 362 Query: 197 LAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLF 256 A E+ R G +VL + +A+ + A +Y A S + LL Sbjct: 363 AAVQELKRKGARVLGVVNVVGSAIAREADGGMYVHA-GPEVCVVSTKCFTNTVVAFALLA 421 Query: 257 IALIQ------QDLELAPERIRHSEALVKKLV 282 + L + D E +R + +++ Sbjct: 422 LHLGRIRDLSVADGRRIIEGLRRLPDQIGEIL 453 >UniRef50_Q8SRI2 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=93 Tax=cellular organisms RepID=GFA1_ENCCU Length = 699 Score = 94.7 bits (234), Expect = 3e-18, Method: Composition-based stats. Identities = 37/267 (13%), Positives = 88/267 (32%), Gaps = 12/267 (4%) Query: 22 ADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESP 81 A L+ L + + + S+ + K G P ++ + Sbjct: 279 ASALIEHTRKVIFLEDNDIVHISN-GNISIHRMHSKAKESG-PEIREVKTIETELAAIMK 336 Query: 82 SVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIG 141 H I+ + ++ T+++ L + V+ +R ++RII G Sbjct: 337 GNYDHYMIKEINEQEESVVNTMRGRINFESLTVSL---GGLKDHVSGIRKSQRIIFVACG 393 Query: 142 ASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADE 201 S + L ++ +V L D + +S +G + +A Sbjct: 394 TSYHASLANRALLEELLEIPVSVEIASDFLDRAPPIMRSDCVFFVSQSGETADSVMALRY 453 Query: 202 MLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALI- 260 + +G + IT + + + + ++ A AS A +Q + L+ + L Sbjct: 454 CMSMGALCVGITNTVGSTISRETACGVHINA-GPEIGVASTKAYTSQYIALVLVALQLSD 512 Query: 261 -----QQDLELAPERIRHSEALVKKLV 282 Q E +++ + + +++ Sbjct: 513 QNLVKQARRREIMEGLKNISSQINRVL 539 >UniRef50_C3WCJ9 Predicted protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WCJ9_FUSMR Length = 241 Score = 94.7 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 47/211 (22%), Positives = 94/211 (44%), Gaps = 27/211 (12%) Query: 8 RQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALK 67 R+ L +S+++L D++ + S+ +L EA SQ+++ + +KLG++GF LK Sbjct: 15 REIRISLTRSEEELMDFIEKNFKEIPNYSAIKLCEEAYSSQATLNRVCKKLGFRGFSELK 74 Query: 68 LALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVT 127 ++ E L + E ++ + E++ + Sbjct: 75 FSIEEDLK----------------------LMENSKNSYIHNTIYYIDNINFEEIDNIIK 112 Query: 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAIS 187 +L++ R+I+L G+GAS + A F +L+ +GF A + + + + D ++ IS Sbjct: 113 ILKNNRKILLYGLGASQITAAYFQRQLLYLGFQAIMISEEKMMESF-----DDFIIFIIS 167 Query: 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPN 218 +G + A M +G V+AIT + Sbjct: 168 SSGETLRVKHIAKNMKELGRIVIAITKKDSS 198 >UniRef50_A8F7W0 N-acetylmuramic acid 6-phosphate etherase n=2 Tax=Thermotogaceae RepID=MURQ_THELT Length = 299 Score = 94.3 bits (233), Expect = 4e-18, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 69/213 (32%), Gaps = 25/213 (11%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEK--LHECVTMLRSARRIILTGIGASGLVAQ-NF 150 + + + +E+ A V +E + C+ L R+ G G SG VA + Sbjct: 22 DTFEILKLINEEDALVALAIREVLTEIDKVVQMCINCLEKNGRVFYVGAGTSGRVAYVDA 81 Query: 151 AWKL------------------MKIGFNAAAVRDMHA---LLATVQASSPDDLLLAISYT 189 + +G + V D S D+++ I+ + Sbjct: 82 VELIPTYSLQEGVFIPIIAGGTQALGKSVEGVEDDEEGGKNDLFSYKPSEKDVVIGIAAS 141 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA-EEQATNSASISACHAQ 248 G + A + G K I L + A + E S + A AQ Sbjct: 142 GRTPYVAGALRYAKQCGCKTALICNVRKPLLAEYADVVIAAETGPEVVAGSTRMKAGTAQ 201 Query: 249 GMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 M+ +++ ++ + ++ + L +KL Sbjct: 202 KMILNMISTTVMVKMGKVYDNLMVDVMVLNEKL 234 >UniRef50_B3SFH4 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3SFH4_TRIAD Length = 331 Score = 94.3 bits (233), Expect = 4e-18, Method: Composition-based stats. Identities = 21/167 (12%), Positives = 53/167 (31%), Gaps = 5/167 (2%) Query: 119 EEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASS 178 E + + ++ + G+S + + A Sbjct: 5 EYVDNLSAIDWGNVSKVSIIACGSSYNAGMVAKYWFESYAKIPVEIDFASEFRARNVIYD 64 Query: 179 PDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 + + IS +G + A E + + + +++ + + + A T+ Sbjct: 65 KKGVYIFISQSGETLDTLSALKEAKKQNVTTIGLINNLNSSIANLSDYLIPIEA-GVETS 123 Query: 239 SASISACHAQGM-LTDLLFIALIQQD---LELAPERIRHSEALVKKL 281 A+ + AQ M L +L+ +A Q++ + + + KL Sbjct: 124 VAATKSFIAQLMKLLNLVLMASKQKNIITQSSYLGMLSDFNSEIAKL 170 Score = 41.5 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 19/154 (12%), Positives = 45/154 (29%), Gaps = 5/154 (3%) Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 K +++ + I + E K+ E Sbjct: 128 KSFIAQLMKLLNLVLMASKQKNIITQSSYLGMLSDFNSEIAKLCDILSVN---RKIIEIS 184 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIG-FNAAAVRDMHALLATVQASSPDDLLLA 185 + A+ +I G + A KL ++ A+ ++ D L++ Sbjct: 185 KAITQAKNVIFIGRNHMYPICLEGALKLKELSYLPVFAIAAGELKHGSIALVDEDSLIIG 244 Query: 186 ISYTGV-RRELNLAADEMLRVGGKVLAITGFTPN 218 ++ + + +E+ G K++ +T N Sbjct: 245 LAPKNDVYNKTLSSIEEVKARGAKIVLLTDSKDN 278 >UniRef50_C2DAD6 3-hexulose-6-phosphate isomerase n=2 Tax=Enterococcus faecalis RepID=C2DAD6_ENTFA Length = 192 Score = 94.3 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 67/182 (36%), Gaps = 10/182 (5%) Query: 101 KLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFN 160 K E + N S++++ ++ A I L G G SGL+ + FA +L+ +G++ Sbjct: 15 KFFNEIIDEVLTIGNEISDQQVDRMTKAIQGANHIFLAGAGRSGLMIRAFANRLLHLGYS 74 Query: 161 AAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNAL 220 + V ++ + DL L S +G L A G + T + + L Sbjct: 75 VSLVGEIS-----SPHTKSGDLFLIGSGSGETTSLVNQAKIAKDNGVVIGLFTTNSSSTL 129 Query: 221 QQRASHCLYTIAEEQA---TNSASISACHAQ--GMLTDLLFIALIQQDLELAPERIRHSE 275 + A + + + + + Q L D + + L+++ E Sbjct: 130 GEIADQVVIIPTQSKQSKDEALQPMGSLFEQTSLFLYDSIILNLMEKTGETNQTMKTRHA 189 Query: 276 AL 277 L Sbjct: 190 DL 191 >UniRef50_A3WGF3 CBS domain:Sugar isomerase (SIS):KpsF/GutQ family protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WGF3_9SPHN Length = 328 Score = 94.3 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 63/157 (40%), Gaps = 3/157 (1%) Query: 111 YATLNVNSEEKLHECVTMLRSARRIILT-GIGASGLVAQNFAWKLMKIGFNAAAVRDMHA 169 A + V S + I+ GIG SG +A+ A + G +A + A Sbjct: 29 RALSDSGLGNAFERAVDAFNSNKGRIIVTGIGKSGHIARKIAATFVSTGTSALYLHPGEA 88 Query: 170 LLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY 229 + S DD++ AI+++G +EL+ + +++ T + + + A CL Sbjct: 89 SHGDLGTISRDDVVFAITWSGTTQELSDIVNFCGINNQQLVVATAHPQSWIGKAADICLT 148 Query: 230 TI--AEEQATNSASISACHAQGMLTDLLFIALIQQDL 264 E A S+ Q +L D L +ALI+ Sbjct: 149 LPMVREACPNELAPTSSTTMQMVLGDALAVALIEARG 185 >UniRef50_O28478 Uncharacterized protein AF_1796 n=1 Tax=Archaeoglobus fulgidus RepID=Y1796_ARCFU Length = 183 Score = 94.3 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 38/189 (20%), Positives = 80/189 (42%), Gaps = 14/189 (7%) Query: 99 GEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG 158 + ++ + + N E + E + ++ SAR I + G G SG +A+ FA +LM +G Sbjct: 1 MLRFLEVVSEHIKNLRNHIDLETVGEMIKLIDSARSIFVIGAGRSGYIAKAFAMRLMHLG 60 Query: 159 FNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPN 218 + V + + D+L+AIS +G + + + +G K++A+TG + Sbjct: 61 YTVYVVGET-----VTPRITDQDVLVAISGSGETTSVVNISKKAKDIGSKLVAVTGKRDS 115 Query: 219 ALQQRASHCLYTIA------EEQATNSASISACH--AQGMLTDLLFIALIQQDLELAPER 270 +L + A + +E + A + + D L ++ Q L + Sbjct: 116 SLAKMADVVMVVKGKMKQERDEILSQLAPLGTMFELTAMIFLDALVAEIMMQ-KHLTEKD 174 Query: 271 IRHSEALVK 279 + A+++ Sbjct: 175 LEARHAVLE 183 >UniRef50_C9KL97 N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KL97_9FIRM Length = 304 Score = 93.9 bits (232), Expect = 5e-18, Method: Composition-based stats. Identities = 34/227 (14%), Positives = 69/227 (30%), Gaps = 24/227 (10%) Query: 78 PESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIIL 137 H + + ++ + AA+ L + E L+ R+ Sbjct: 9 ERRNPASAHIDSCSTLEMVTIMQQEDSKIAAAIEKILPEI-ARAIDETSQRLKRGGRLFY 67 Query: 138 TGIGAS--------------GLVAQNFAWKLMKIGFNAAA--------VRDMHALLATVQ 175 G G S A L+ G A D+ Sbjct: 68 LGAGTSGRLGILDASECPPTYGTAPELVQGLIAGGTPAIFRAQEGAEDNPDLAVQDLKEH 127 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL-YTIAEE 234 + D+L+ I+ +G + + +G +A++ + + A L E Sbjct: 128 GFTEKDVLVGIAASGRTPYVIGGLNYAKALGALTIALSCSEHSKIAALADIALTPVTGPE 187 Query: 235 QATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 T S + A AQ ++ ++L + + ++ + +A KKL Sbjct: 188 IVTGSTRMKAGTAQKLVLNMLSTGTMIKLGKVYGNLMVDVKASNKKL 234 >UniRef50_C9AA73 Predicted protein n=1 Tax=Enterococcus casseliflavus EC20 RepID=C9AA73_ENTCA Length = 271 Score = 93.9 bits (232), Expect = 5e-18, Method: Composition-based stats. Identities = 43/268 (16%), Positives = 93/268 (34%), Gaps = 16/268 (5%) Query: 2 NGLLRIRQRYQGLAQSDK-----KLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQ 56 N L + L +++ LA+Y L L+ Q+A++ VS+SS+ +F + Sbjct: 12 NRLSLLNSLCNILNENEVGNPSVILAEYFLKNYHYLSELNIYQVADDCFVSRSSIRRFCK 71 Query: 57 KLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNV 116 +GY F K + E + R L A++ Sbjct: 72 SIGYNNFAEFKNEIREYDDQYSNLTAHFRQQDFREI---------LTNNVLEAIHEMSRS 122 Query: 117 NSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA 176 S E++H + +R ++ + F + ++ G V +++ ++ Sbjct: 123 ISREQIHLIARRIHKSRNTLILTSNYAVSAINTFQYGMVLQGKVIRLVSELYETNNLLKE 182 Query: 177 SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA 236 + DD ++ IS G+ + + + T + + E+ + Sbjct: 183 VTADDYVIVISGHGILAGVIE--EFLKTTTAYTELFTVNRSRSFDLLYDSICWLSEEDGS 240 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDL 264 S SI + L DL++ +++ Sbjct: 241 HESRSIYMVYGMQYLLDLVYANYVREYG 268 >UniRef50_C3RMD5 Transcriptional regulator (Fragment) n=2 Tax=Bacteria RepID=C3RMD5_9MOLU Length = 227 Score = 93.9 bits (232), Expect = 5e-18, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 81/222 (36%) Query: 56 QKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLN 115 +K F K+ L+ L + + I QI+ + V EK+ + T Sbjct: 1 KKFNDGSFSDFKVDLAYELQNMMSKGNNKILFQIKKQETAFSVMEKIASVEKDTIDRTKL 60 Query: 116 VNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQ 175 + + +++ ++ A I + G + + F + + +IG D + Sbjct: 61 LLNYQQIERITKLINKATIIYIFADGINEQIGHEFKYMMARIGKAVEIATDNFWVALNCL 120 Query: 176 ASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQ 235 + S + L + +++ +L ++ +A+TG+ + + + Sbjct: 121 SESANPLAIYVNHREHNVQLLEKIRLNHKIAIPGIAVTGYINSTFETCCKEVITIPTGVS 180 Query: 236 ATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEAL 277 ++ A + A + + L +I + EL+ +++ L Sbjct: 181 YSDLAPVIYTTAIRYVLNTLVGCVIASNHELSMDKLIDYTEL 222 >UniRef50_C3RJC2 Predicted protein n=2 Tax=Bacteria RepID=C3RJC2_9MOLU Length = 257 Score = 93.9 bits (232), Expect = 5e-18, Method: Composition-based stats. Identities = 36/250 (14%), Positives = 83/250 (33%), Gaps = 15/250 (6%) Query: 3 GLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKG 62 L + G S ++A Y+L + ++L +++A E V+ SS+ +F +++G + Sbjct: 10 FLSTLVSEKNGSTNS--QIAAYILNHLEEVQNLGIKEIAKECNVAVSSISRFCKEVGLRD 67 Query: 63 FPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKL 122 F LK L + + + ++ + + Sbjct: 68 FAELKELLLS---------TDLSFEDHSHATSKQARLHDYSHKVRESIIMVEKSIDMDAV 118 Query: 123 HECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDL 182 + + +++ + G+ +G VA N L+ + + + A+ DDL Sbjct: 119 IDLCKDINEYQKVAIFGLLKAGAVAFNLQGDLLMLNKQVYTNISYSQQIQYIVAADEDDL 178 Query: 183 LLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA----EEQATN 238 ++ SYTG + R+ + + + + + Sbjct: 179 IIIFSYTGAYFDYQDLRALKKRLTAPKIWMISSDDREYPECIDRTILFKSLQDQNSHPYQ 238 Query: 239 SASISACHAQ 248 I+ AQ Sbjct: 239 LQFIAGLIAQ 248 >UniRef50_Q8DJI6 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=10 Tax=Cyanobacteria RepID=GLMS_THEEB Length = 626 Score = 93.9 bits (232), Expect = 5e-18, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 70/217 (32%), Gaps = 9/217 (4%) Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSA 132 H ++ V ++ A + + S +L+ ++L + Sbjct: 242 NWNPVMVEKQGFKHYMLKEIYEQPGVVRACLENYLRADWEVASPFSPVQLNLPPSLLDNL 301 Query: 133 RRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVR 192 + I + G S + L ++ +V+ P L + ++ +G Sbjct: 302 QHIQIVACGTSWHAGLVGKYLLEQVAQIPTSVQYASEFRYAPPPLLPHTLTIGVTQSGET 361 Query: 193 RELNLAADE-MLRV----GG---KVLAITGFTPNALQQRASHCLYTIAEEQATNSASISA 244 + A + + R G ++L IT ++L H + T A A+ Sbjct: 362 ADTLAALEMELKRRQGLDGALQPRLLGITNRPESSLGHLVPHIIDTRA-GIEIGVAATKT 420 Query: 245 CHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 AQ M LL + L Q R+ +++L Sbjct: 421 FVAQLMAFYLLTLELSWQRQSCDRSRLAELVTGLRQL 457 >UniRef50_O83833 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=3 Tax=Bacteria RepID=GLMS_TREPA Length = 635 Score = 93.9 bits (232), Expect = 5e-18, Method: Composition-based stats. Identities = 30/216 (13%), Positives = 60/216 (27%), Gaps = 11/216 (5%) Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV 126 + + + + QP + ++ + R ++ V Sbjct: 250 RHHMHQEIWQQPHAIRHTLNAYMSFSSSSRAQVRTFGED---------RVLDGTSCKTFE 300 Query: 127 TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAI 186 + R R+ + G S + V +++L I Sbjct: 301 RLFRRITRVRIIACGTSYHAGLVARYWFEAFAGVGCQVEIASEYRYRTSVVHAREIVLTI 360 Query: 187 SYTGVRRELNLAADEMLRVGGKV-LAITGFTPNALQQRASHCLYTIAEEQATNSASISAC 245 S +G + A G +AI + L + + L T A AS + Sbjct: 361 SQSGETADTIAALRLAKTQGYLCAIAICNGARSTLVRESDAVLLTHA-GSEIGVASTKSF 419 Query: 246 HAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 Q + +L + Q L E A +++L Sbjct: 420 TTQLVCLLVLTRMIAQAKKILTQEPEDALSAALQRL 455 >UniRef50_Q88BX8 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=93 Tax=Proteobacteria RepID=GLMS_PSEPK Length = 611 Score = 93.9 bits (232), Expect = 6e-18, Method: Composition-based stats. Identities = 38/202 (18%), Positives = 62/202 (30%), Gaps = 9/202 (4%) Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLN-------VNSEEKLH 123 + Q E+ + R K I E + + TL V + Sbjct: 226 QQGNKVQRETVQYHEGAEAADKGAYRHFMLKEIHEQPSVVQRTLEGRLGKDNVLVQAFGP 285 Query: 124 ECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLL 183 + + R + + G S + L + V PD L Sbjct: 286 QAADLFAKVRNVQIVACGTSYHAGMVARYWLESLAGIPCQVEVASEFRYRKVVVQPDTLF 345 Query: 184 LAISYTGVRRELNLAADEMLRVGGK-VLAITGFTPNALQQRASHCLYTIAEEQATNSASI 242 ++IS +G + A +G LAI ++L + + L T+A AS Sbjct: 346 VSISQSGETADTLAALRNAKELGFLGSLAICNVGISSLVRESDLTLLTLA-GPEIGVAST 404 Query: 243 SACHAQGMLTDLLFIALIQQDL 264 A Q + LL +AL Q Sbjct: 405 KAFTTQLVSLMLLTLALGQVRG 426 >UniRef50_Q7MCJ0 Transcriptional regulator n=4 Tax=Vibrionaceae RepID=Q7MCJ0_VIBVY Length = 215 Score = 93.5 bits (231), Expect = 6e-18, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 86/245 (35%), Gaps = 40/245 (16%) Query: 11 YQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLAL 70 ++ + +YL+ +S++ +AN+A + +SV + +K+GY + L+ L Sbjct: 1 MNTFRGIERVIYEYLIGHASQLHEISAKTIANKALTTTTSVNRVCKKMGYASYTELRYKL 60 Query: 71 SEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLR 130 + L Q ++ + + + L Sbjct: 61 ANELKKQAQNQEG-------------------------------EECEQSVISQVAKTLS 89 Query: 131 SARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTG 190 + + L GAS + + L + D+H L LL IS +G Sbjct: 90 GSPVVYLYSRGASIVSVNYLSRFLSLANVPHLVITDIHQLTRAELGM-----LLLISKSG 144 Query: 191 VRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGM 250 + + A R G KV+ I+ + L Q + + E+ + S+ + +Q Sbjct: 145 ETQAVVEMAHNAKRKGLKVMGIS-RKGSTLAQSSHLNIPL---EEQVDGISLYSRESQIH 200 Query: 251 LTDLL 255 + +++ Sbjct: 201 ILNIV 205 >UniRef50_Q6MBL9 Probable glutamine-fructose-6-phosphate transaminase (Isomerizing) n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MBL9_PARUW Length = 607 Score = 93.5 bits (231), Expect = 7e-18, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 69/218 (31%), Gaps = 9/218 (4%) Query: 72 EALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE-------KLHE 124 ++ QI +++ ++ A A L+ E +L Sbjct: 225 HHKITKESQFIEGDLEQISKGSFEHFTLKEIYEQPQAIRNALLSRILPEYGTALFEELDF 284 Query: 125 CVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLL 184 +T L + RI++ G S A+ + V P ++ Sbjct: 285 NMTDLLTVERILILACGTSWHAGCVAAYLIEDKARIPVQVEISSEFRYKNPVVPPGTFVI 344 Query: 185 AISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT--IAEEQATNSASI 242 AIS +G + A E+ G +VLA+ + L + A ++ AE ++ + Sbjct: 345 AISQSGETADTIAAVKEVKAKGARVLALCNVQGSTLTREADETIFLKAGAEIGVCSTKAF 404 Query: 243 SACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKK 280 ++ L LL + + + L + Sbjct: 405 TSQVVVLALFTLLLARMRHMSKGEGQDFLEAILKLPDQ 442 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 48/171 (28%), Gaps = 9/171 (5%) Query: 100 EKLIKENTAAMYATLNVNSEE-KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIG 158 + ++ V + + G + A KL +I Sbjct: 430 QDFLEAILKLPDQVQMVLDQSIAIERIAKKYAGFDNFFYLGRRYMFPTSLEGALKLKEIS 489 Query: 159 -FNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRE-LNLAADEMLRVGGKVLAITGFT 216 NA + + D +A+ E L E+ GK++AI Sbjct: 490 YINANGYAAGEMKHGPIALINEDCPTVALCANRQTFEKLLSNLMEIKARHGKIIAIVEEQ 549 Query: 217 PNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELA 267 A+++ A +Y S + ++T LL + ++ Sbjct: 550 EKAIEKIADDVIYIPHVIDELASILTT------VVTQLLAYYIAKERGADI 594 >UniRef50_Q048M7 Transcriptional regulator n=2 Tax=Lactobacillus delbrueckii subsp. bulgaricus RepID=Q048M7_LACDB Length = 251 Score = 93.5 bits (231), Expect = 7e-18, Method: Composition-based stats. Identities = 39/239 (16%), Positives = 76/239 (31%), Gaps = 23/239 (9%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 M+ L++SD+K+ + L+ LA EAG S +SV +F QK+GY Sbjct: 1 MDITNFFTVETSELSKSDRKIMKRMTSDLTNVESLTINHLAEEAGTSLASVQRFCQKMGY 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF K L + + + D ++ N Sbjct: 61 SGFKEFKFQLL--TYIKKQESQEAAVSSSEYLDDYHDAINRVWTANEKDAEEL------- 111 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 +L ++ + GI S L A+ + + +G + ++ A S + Sbjct: 112 -----AEVLATSSTNFIFGIYYSELPARLLSMGMRDLGKSTYFGDNLAAGEHLFPLSDEN 166 Query: 181 DLLLAISYTGVRR-----ELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEE 234 + S +G+ + L + +T L++ + + Sbjct: 167 STAVFYSVSGISKLFGSSPLPKSISHFKHS----YLVTMNPDTPLKKYFKKVIVLPGKN 221 >UniRef50_Q9V249 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=3 Tax=Euryarchaeota RepID=GLMS_PYRAB Length = 598 Score = 93.5 bits (231), Expect = 7e-18, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 62/184 (33%), Gaps = 5/184 (2%) Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 GF +K ++ + + +++ ++ A A Sbjct: 219 NGFT-VKDIITGKEKRKKVYEIQWTLEMAEKGGYDHFMLKEIFEQPRAVKDAIYGNLE-- 275 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA-SSP 179 ++ + +L RII+TG+G S A + + + G V + L + Sbjct: 276 EVPKIAGLLSKYDRIIITGMGTSYHAALVGKYLIQRFGKIPVLVEEASELRYEYEDILDN 335 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 LL+AI+ +G + A G KV+ I + + A LYT A Sbjct: 336 KTLLIAITQSGETADTVAAMKLAKSKGSKVIGIVNVVGSLATRIADATLYTHA-GPEIGV 394 Query: 240 ASIS 243 A+ Sbjct: 395 AATK 398 >UniRef50_D1B9X1 Glucosamine/fructose-6-phosphate aminotransferase, isomerizing n=2 Tax=Synergistaceae RepID=D1B9X1_THEAS Length = 608 Score = 93.5 bits (231), Expect = 7e-18, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 8/206 (3%) Query: 67 KLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLN-------VNSE 119 ++ + + + + D K I E + +TL V+ Sbjct: 220 RIWDKDGRPVERPVHRIDWDVSMAEKDGYPHYMAKEIHEQGTVLRSTLKGRLSESGVDLG 279 Query: 120 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP 179 + +H LRS RRI L G S L + V Sbjct: 280 DDVHWDGDFLRSLRRINLVACGTSYYACLVAERVLERWTSLDVKVDIASEYRYRDVKIGA 339 Query: 180 DDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 D L + +S +G + A ++ +GG+ L IT + L + L A Sbjct: 340 DTLAVFVSQSGETADTLAAQRKVRSLGGRCLGITNVRGSTLAREVHDLLLLKA-GPEIGV 398 Query: 240 ASISACHAQGMLTDLLFIALIQQDLE 265 A+ Q LL + L + + Sbjct: 399 AATKTFMGQLGALYLLALKLGWERGD 424 Score = 53.4 bits (127), Expect = 8e-06, Method: Composition-based stats. Identities = 19/146 (13%), Positives = 42/146 (28%), Gaps = 8/146 (5%) Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF-NAAAVRDMHALLATVQASSP 179 + + G G S +A A KL +I + +A A + P Sbjct: 453 DVKAAAERFCGYDDFLFLGRGFSYPIALEGALKLKEISYVHAEAYAAGEMKHGPIALLEP 512 Query: 180 D-DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATN 238 + +++ I G+ + E ++A+ + + Q A + E+ + Sbjct: 513 NVPVMVVIPKDGLYEKTLSNVQEARARKSPIVAVASDGDDLIDQMADWVIRIPRCEECFS 572 Query: 239 SASISACHAQGMLTDLLFIALIQQDL 264 + + Q Sbjct: 573 --PFISVIP----LQQFAYHVAQLRG 592 >UniRef50_B2KEC3 Glucosamine/fructose-6-phosphate aminotransferase, isomerizing n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KEC3_ELUMP Length = 614 Score = 93.1 bits (230), Expect = 8e-18, Method: Composition-based stats. Identities = 41/266 (15%), Positives = 81/266 (30%), Gaps = 29/266 (10%) Query: 25 LLLQPDTARHLSSQQL--ANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPS 82 L + L ++ A + +S F + G + +P Sbjct: 204 FLKHTNKVVFLEDNEIVVARQNNIS------FYDENGKE--------------KKPLITQ 243 Query: 83 VPIHNQIRGDDPLRLVGEKLIKENTAAMYATLN---VNSEEKLHECVTMLRSARRIILTG 139 + + + K I E A+ TL + +++ ++I + Sbjct: 244 IKWNTAQAEKGGYKHFMLKEIYEQPDAVADTLRFGVEDMPSVFGMSGKQIKNIKKIQIIA 303 Query: 140 IGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAA 199 G + + + + V S+P L +A+S +G + A Sbjct: 304 CGTAYHAGLCSKYFIEEYSGIPVEVDYASEYKYRFVPSTPGTLAIAVSQSGETADTIAAM 363 Query: 200 DEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIAL 259 + G K LAI + L + A H +T + AS A +Q L + L Sbjct: 364 KKAKEAGFKTLAICNVLGSTLTRMADHTFFTRC-GLEISVASTKAFTSQLAALYGLAVFL 422 Query: 260 IQQDLELAPERIRHSEA---LVKKLV 282 Q L + + + +L+ Sbjct: 423 GFQRGVLNSAQFKKYSTEFFALPRLL 448 >UniRef50_C7LLH6 SIS domain protein n=3 Tax=Mycoplasma mycoides group RepID=C7LLH6_MYCML Length = 271 Score = 93.1 bits (230), Expect = 8e-18, Method: Composition-based stats. Identities = 37/247 (14%), Positives = 85/247 (34%), Gaps = 14/247 (5%) Query: 1 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60 MN + +I+Q L+ + K+ DY+L + S + + + V S + K KL Sbjct: 1 MNIIEKIKQNKINLSPQELKVCDYILTNISDYHNFSVKSICKKLNVQPSVITKTLVKLEI 60 Query: 61 KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120 G L L + V + ++ ++ Sbjct: 61 GGLKQLISYLENNSNFFKDETKV----------SFDNIIDEFENRLEDSLKQLKTNLDIN 110 Query: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180 L E V + S+++IIL G + ++A ++L+++ + + L + + Sbjct: 111 YLKEVVCKILSSKKIILFCTGKTKILANFLFFQLLELNLSVELFSN---LFDSRAYNVEQ 167 Query: 181 DLLLAISYTGVRRELNLAADEMLRVG-GKVLAITGFTPNALQQRASHCLYTIAEEQATNS 239 ++ IS +G ++N + + + ++ IT + ++ N Sbjct: 168 ACIIVISTSGNNSKINRYLNFISKRKPNTIIGITSSPILKTDIEVDYHIHGSENNFFIND 227 Query: 240 ASISACH 246 + Sbjct: 228 NRSNPMI 234 >UniRef50_D2RNB9 Glucokinase regulatory-like protein n=3 Tax=Bacteria RepID=D2RNB9_ACIFE Length = 278 Score = 93.1 bits (230), Expect = 9e-18, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 70/214 (32%), Gaps = 25/214 (11%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEKL--HECVTMLRSARRIILTGIGASGLVA-QNF 150 + + E + +E+ A + L L R+ G G SG + + Sbjct: 23 STQEMMEIINREDHKVADAVEKILPAIALAVDLVADRLSRGGRLFYMGSGTSGRLGILDA 82 Query: 151 AWK-------------LMKIGFNAAA--------VRDMHALLATVQASSPDDLLLAISYT 189 L+ G+ A + + +P D+++ IS + Sbjct: 83 VECPPTYSTDPEQIQGLIAGGYEAIFRAKEGAEDSEEQGRDDIWNKELTPLDVVMGISAS 142 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYT-IAEEQATNSASISACHAQ 248 G + E G VL + +A+ + A CL E T S + A A Sbjct: 143 GRTPYVLGGMKEARERGCAVLGLCCSRQSAMAKLADLCLTVLPGPEVITGSTRMKAGTAT 202 Query: 249 GMLTDLLFIALIQQDLELAPERIRHSEALVKKLV 282 M+ +++ + + ++ + A +KL+ Sbjct: 203 KMVLNMITTGAMVKLGKVRGNLMIDVRATNEKLL 236 >UniRef50_A7VQ52 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQ52_9CLOT Length = 227 Score = 93.1 bits (230), Expect = 9e-18, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 75/219 (34%), Gaps = 14/219 (6%) Query: 66 LKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHEC 125 + L S PI +I ++ + + + M + ++ L Sbjct: 13 FRYCL-GWKNHSRVIDSKPIWTEIFKEELKMGLLNEYANTALSEMQQVFDRMDDKDLQPA 71 Query: 126 VTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLA 185 + + +A++++ G G GL + F +LM +G +A D T + D++ Sbjct: 72 LDAIINAKKVVCYGAGREGLGLKFFVMRLMHLGKDAHWAWD-----DTAPSVGEGDVVFI 126 Query: 186 ISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNS------ 239 G + A+ + G K++ +T + + + A ++ A + Sbjct: 127 SCGPGFYSHVVFIAELCKKAGAKIVLVTAVPDSDMGKVADVIVHLPAMAYRAHGDLVPTK 186 Query: 240 ASISACH--AQGMLTDLLFIALIQQDLELAPERIRHSEA 276 + + + +L D + L QQ E + Sbjct: 187 QPMGNLYEQSAVILFDCMSRMLKQQMNVSDEEMEKRHRN 225 >UniRef50_C0D3Y2 Putative uncharacterized protein (Fragment) n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D3Y2_9CLOT Length = 159 Score = 93.1 bits (230), Expect = 9e-18, Method: Composition-based stats. Identities = 31/133 (23%), Positives = 68/133 (51%), Gaps = 1/133 (0%) Query: 2 NGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK 61 + L+R+ + + ++ ++ Y+L P+ A LS +L+ A S +++V+ ++LG+ Sbjct: 27 SVLVRLNEYQLQMTPAESEVVQYILHHPEKAAELSVHELSARAFSSSATIVRMCRRLGFD 86 Query: 62 GFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK 121 G+ L+ +L LA + +S + +D L + +K+ +N ++ T N+ Sbjct: 87 GYKELRRSLQYELAVRKQSEMEKRDE-VSREDSLEQMVDKITYKNIVSLEETKNLVDLPV 145 Query: 122 LHECVTMLRSARR 134 L +CV ++ AR Sbjct: 146 LQKCVDLMCVARN 158 >UniRef50_P17115 Protein gutQ n=113 Tax=Gammaproteobacteria RepID=GUTQ_ECOLI Length = 321 Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 69/179 (38%), Gaps = 2/179 (1%) Query: 100 EKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF 159 + + ++ + +L +++++GIG SG + + A L G Sbjct: 10 RQTLMLELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGT 69 Query: 160 NAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNA 219 A V AL + D++L ISY+G +EL+L + +LA+TG + Sbjct: 70 PAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSP 129 Query: 220 LQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA 276 L A L E + A S+ M+ D L +A++Q + R A Sbjct: 130 LGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPA 188 >UniRef50_A3EU24 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=2 Tax=Leptospirillum sp. Group II RepID=A3EU24_9BACT Length = 605 Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 53/179 (29%), Gaps = 5/179 (2%) Query: 73 ALASQPESPSVPIHNQIRGDDPLRLVGEK-LIKENTAAMYATLNVNSEEKLHECVTMLRS 131 A S+ R EK + + A M + S + + Sbjct: 231 EWAPPSSLRSISWDPVFAEKGTFRHFMEKEIFEAPRAMMDTLADRLSVTPVLPELDRSVH 290 Query: 132 ARRII--LTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYT 189 R + G S A L + G A V P ++ IS + Sbjct: 291 GRPPVVAFVACGTSWHAALLGRAFLEQAGIPA-FVEIASEFRYRRLLLPPGSWVIGISQS 349 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 G + A + R G L I+ ++L++ CL T A AS A AQ Sbjct: 350 GETADTIGAMESARRAGFLTLGISNVPGSSLERECDLCLLTHA-GPEIGVASTKAFQAQ 407 >UniRef50_Q28KP2 N-acetylmuramic acid 6-phosphate etherase n=25 Tax=Bacteria RepID=MURQ_JANSC Length = 316 Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 66/213 (30%), Gaps = 25/213 (11%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSEEK--LHECVTMLRSARRIILTGIGASG----LVA 147 + + E+ A + V + R+I G G SG L A Sbjct: 33 TTAQILACMNAEDRKIADAVAAELPAIAQTVDRIVAAIGRGGRLIYIGAGTSGRLGVLDA 92 Query: 148 QNFAWKLM---------------KIGFNAAAVRDMHA---LLATVQASSPDDLLLAISYT 189 + + A D A + D+++ I+ + Sbjct: 93 SECPPTFSVPPGMVVGLIAGGDTALRTSVEAAEDDEATGAEDVKAIGLTTKDVVIGIAVS 152 Query: 190 GVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL-YTIAEEQATNSASISACHAQ 248 G + A D R+G A+T + + A + + E T S + + AQ Sbjct: 153 GRTPFVMGAIDYARRIGAFTAALTCNPGSPMADLADIAISPVVGPEVVTGSTRLKSGTAQ 212 Query: 249 GMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 M+ ++L A + + + R+ +KL Sbjct: 213 KMILNMLSTASMIRLGKTWGNRMVDVTISNRKL 245 >UniRef50_P14742 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=18 Tax=Fungi/Metazoa group RepID=GFA1_YEAST Length = 717 Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 37/259 (14%), Positives = 82/259 (31%), Gaps = 24/259 (9%) Query: 22 ADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESP 81 A ++ L LA+ + + + +++G Sbjct: 294 AASVVKHTKKVLFLEDDDLAH-IYDGELHIHRSRREVGAS--------------MTRSIQ 338 Query: 82 SVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEK--------LHECVTMLRSAR 133 ++ + P +K I E + + T+ + + L + ++R AR Sbjct: 339 TLEMELAQIMKGPYDHFMQKEIYEQPESTFNTMRGRIDYENNKVILGGLKAWLPVVRRAR 398 Query: 134 RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRR 193 R+I+ G S ++ +V L DD+ + +S +G Sbjct: 399 RLIMIACGTSYHSCLATRAIFEELSDIPVSVELASDFLDRKCPVFRDDVCVFVSQSGETA 458 Query: 194 ELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTD 253 + LA + L G + I +++ + ++ A AS A +Q + Sbjct: 459 DTMLALNYCLERGALTVGIVNSVGSSISRVTHCGVHINA-GPEIGVASTKAYTSQYIALV 517 Query: 254 LLFIALIQQDLELAPERIR 272 + ++L + RI Sbjct: 518 MFALSLSDDRVSKIDRRIE 536 >UniRef50_B5JQT0 Sugar isomerase, KpsF/GutQ family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQT0_9BACT Length = 326 Score = 92.7 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 65/169 (38%), Gaps = 5/169 (2%) Query: 100 EKLIKENTAAMYATLNVNSEEK---LHECVTMLRSARRIILTGIGASGLVAQNFAWKLMK 156 ++ + AA++AT + + L ++IL+G+G + + Q L Sbjct: 11 QRCLDIEIAALHATRDSLDARFAQVVSLLHQTLARGNKLILSGVGKNAHICQKLVGTLNS 70 Query: 157 IGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFT 216 G + + + AL + D ++A S +G EL + R + +A+T Sbjct: 71 TGAPSTFLDPVQALHGDLGLCRQRDTVVAFSNSGETAELLRFLPMVQRFDVQTIAVTAKP 130 Query: 217 PNALQQRASHCLYTIA--EEQATNSASISACHAQGMLTDLLFIALIQQD 263 ++L + L E A ++ A + D + + L++ + Sbjct: 131 DSSLAKMCDATLLYAIEREACPLELAPTASTTASLAIGDAVAMVLLELN 179 >UniRef50_Q821Z7 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=15 Tax=Chlamydiaceae RepID=GLMS_CHLCV Length = 609 Score = 92.7 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 45/229 (19%), Positives = 71/229 (31%), Gaps = 16/229 (6%) Query: 22 ADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESP 81 A L + + L+S +LA S+ FA K +K ++ + S + Sbjct: 195 ARAFLKHTKSIQALASGELAVVGLGSEVETYNFALKRIHK---EVRQVVYTDADSDKQGY 251 Query: 82 SVPIHNQI-RGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGI 140 S + +I + L + K + + LN S E E + Sbjct: 252 SYYMLKEIYEQPEVLERLIHKYLDQQGCISEKFLNGFSIEDFDEI----------SIVAC 301 Query: 141 GASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAAD 200 G+S + + + V L + IS +G + A Sbjct: 302 GSSYHAGFLAKYIIESLVSIPVHVEVASEFRYRQAYIGKKTLAILISQSGETADTLAALK 361 Query: 201 EMLRVG-GKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQ 248 E R VL I +AL HCL+ A AS A AQ Sbjct: 362 EFRRRQVACVLGICNVEESALATGVDHCLFLEA-GIEIGVASTKAFTAQ 409 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 20/152 (13%), Positives = 44/152 (28%), Gaps = 8/152 (5%) Query: 115 NVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGF-NAAAVRDMHALLAT 173 + + E LH R I G + A KL +I + A Sbjct: 448 RLLANENLHSWANDYCDEDRFIFLGRRLMYPICMEAALKLKEIAYVEANCYPAGEMKHGP 507 Query: 174 VQASSPDDLLLAISYTGVRRE-LNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIA 232 + S ++ V E + E+ V+A+ + + + +Y Sbjct: 508 IALISQGSPVITFCGDPVVYEKMVGCIMEVKARQAHVIAVASESQEDIAAVSDAQIYVP- 566 Query: 233 EEQATNSASISACHAQGMLTDLLFIALIQQDL 264 NS + + ++ ++ + + Sbjct: 567 -----NSHPLVSPILYTIVGQIMAYTMALKKG 593 >UniRef50_A3VAL1 Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VAL1_9RHOB Length = 320 Score = 92.7 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 61/179 (34%), Gaps = 2/179 (1%) Query: 88 QIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVA 147 + ++ AA+ + + +L ++++ G+G SG + Sbjct: 1 MENMPTTVIDTARDVLLSEAAALTTLADSLPADFEAAAQLILDRNGKVVVGGVGKSGHIG 60 Query: 148 QNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGG 207 + A L G A + A + D L IS +G EL + + R Sbjct: 61 RKIAATLSSTGSPAFFIHPTEAAHGDLGMIEEHDTALLISNSGETSELLVMIEFCQRFDI 120 Query: 208 KVLAITGFTPNA--LQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDL 264 ++ I+ + L + L + E A +++ L D L +L+Q+ Sbjct: 121 PIIGISSVPGSTLMLASQCQLLLPKVPEACPIRLAPMTSTTMTLALGDALAASLMQKRG 179 >UniRef50_Q6F6U8 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] n=232 Tax=cellular organisms RepID=GLMS_ACIAD Length = 612 Score = 92.7 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 31/223 (13%), Positives = 62/223 (27%), Gaps = 13/223 (5%) Query: 64 PALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNV------N 117 + + + + + K I E A+ T++ Sbjct: 216 RDSIEIYAHGVKIERPVKELDASVSNASKGEYKHYMLKEIYEQPEAIQQTISQALNGNAL 275 Query: 118 SEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQAS 177 E+ L + + + G S + ++ V Sbjct: 276 REDFLQFAEADFNQIQNVQIIACGTSYHAGMIAKYWFEQLIGVPCQVEIASEFRYRSPVI 335 Query: 178 SPDDLLLAISYTGVRRELNLAAD------EMLRVGGKVLAITGFTPNALQQRASHCLYTI 231 + L + IS +G + A + + L I +++ + H L T+ Sbjct: 336 VANTLYICISQSGETADTLAALRDTQKRAKAKDIQISTLTICNVATSSMVRETDHHLLTL 395 Query: 232 AEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHS 274 A AS A Q LL + + Q ++A E+I Sbjct: 396 A-GPEIGVASTKAFTTQLAALMLLILKIGQVKEQIAAEQIAEI 437 >UniRef50_C6HYL9 Glucosamine--fructose-6-phosphate aminotransferase, isomerizing n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HYL9_9BACT Length = 616 Score = 92.7 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 54/184 (29%), Gaps = 9/184 (4%) Query: 70 LSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE------KLH 123 L+ E + D + +++ ++ S L Sbjct: 226 LASGRERAAERIGRNRTEEHGKGDYPHYMLKEICEQPRVLAELLAGKISSGPAGLSLHLP 285 Query: 124 ECVT-MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSP-DD 181 V +L ARR+ + G G S +++ + V P D Sbjct: 286 PKVEAVLARARRLRIVGCGTSYHAGLLGKYRIEDLAGRPVEVEIASEFRYREPLLDPASD 345 Query: 182 LLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSAS 241 LL+A++ +G + A G LA+ + + + A L+ A A+ Sbjct: 346 LLVALTQSGETADTLAALRMAREAGVPTLALVNVPGSTIAREADAVLFLEA-GPEFGVAA 404 Query: 242 ISAC 245 Sbjct: 405 TKTF 408 >UniRef50_A8F9E0 N-acetylmuramic acid 6-phosphate etherase n=2 Tax=Bacillus RepID=MURQ_BACP2 Length = 303 Score = 92.7 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 27/225 (12%), Positives = 68/225 (30%), Gaps = 25/225 (11%) Query: 82 SVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSE--EKLHECVTMLRSARRIILTG 139 S + + + + +E+ A V + + R+I G Sbjct: 13 SRNPNTMGISQADPLEILQMINEEDMKVAQAVNLVLPHVKTASDFAYDSISNGGRLIYLG 72 Query: 140 IGASGLVA-QNFAWK---------------------LMKIGFNAAAVRDMHALLATVQAS 177 G SG + + + + Sbjct: 73 AGTSGRLGVMDAVECPPTYSVSPDVIVGIMAGGDSAFSHAAEDVEDSEEAGKQDLVHIHL 132 Query: 178 SPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCL-YTIAEEQA 236 + D ++ I+ +G + A + +G K +A++ + + + A + + E Sbjct: 133 TSKDTVVGIAASGRTPYIIGALNYAKSIGAKTVALSCNEQSKISELADCAIEVIVGPEAI 192 Query: 237 TNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKL 281 T S + A A M+ ++L +++ + ++ + + KL Sbjct: 193 TGSTRMKAASAHKMILNMLSTSVMIRQGKVYENLMVDVKVSNHKL 237 >UniRef50_Q47U25 N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Thermobifida fusca YX RepID=MURQ_THEFY Length = 304 Score = 92.7 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 67/211 (31%), Gaps = 23/211 (10%) Query: 94 PLRLVGEKLIKENTAAMYATLNVNSE--EKLHECVTMLRSARRIILTGIGASGLVA-QNF 150 P + + E+ A V E + + V++LR RI G G SG +A + Sbjct: 27 PTADILRLINAEDATVPRAVAEVLPELAKAVDLGVSVLRHGGRIHYFGAGTSGRLATMDA 86 Query: 151 AWKLMKIGF---NAAAVR----------------DMHALLATVQASSPDDLLLAISYTGV 191 A G A D + A + DL + ++ +G Sbjct: 87 AELPPTFGIARDRVVAHHAGGPSALIHACEGIEDDFSSGRADAATVTSADLAIGLTASGR 146 Query: 192 RRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAE-EQATNSASISACHAQGM 250 + A D G + + +T +AL + E S + A AQ + Sbjct: 147 TPYVAGALDRAREAGARTVLVTADPHSALAADVDVHIGVATGAEVIAGSTRMKAGTAQKL 206 Query: 251 LTDLLFIALIQQDLELAPERIRHSEALVKKL 281 + + A++ + + A KL Sbjct: 207 ILNAFSTAVMVRLGYTYSNLMVGVVATNAKL 237 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.316 0.142 0.340 Lambda K H 0.267 0.0430 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,657,127,950 Number of Sequences: 3077464 Number of extensions: 81418951 Number of successful extensions: 408512 Number of sequences better than 1.0e-01: 1000 Number of HSP's better than 0.1 without gapping: 4764 Number of HSP's successfully gapped in prelim test: 729 Number of HSP's that attempted gapping in prelim test: 397476 Number of HSP's gapped (non-prelim): 6146 length of query: 282 length of database: 1,040,396,356 effective HSP length: 127 effective length of query: 155 effective length of database: 649,558,428 effective search space: 100681556340 effective search space used: 100681556340 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 92 (40.0 bits)